BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254780573|ref|YP_003064986.1| cysteinyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
         (461 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254780573|ref|YP_003064986.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040250|gb|ACT57046.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 461

 Score =  964 bits (2491), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY
Sbjct: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT
Sbjct: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP
Sbjct: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL
Sbjct: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR
Sbjct: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN
Sbjct: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL
Sbjct: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP
Sbjct: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461


>gi|315121767|ref|YP_004062256.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495169|gb|ADR51768.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 461

 Score =  792 bits (2045), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 373/460 (81%), Positives = 418/460 (90%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+K IK+YNTL+R+  EFQAIDPSN+RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR++
Sbjct: 1   MQKNIKLYNTLKRETIEFQAIDPSNVRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRHH 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE+CVTYVRNITDIDDKIIERAR++HPSI I++AI +IT KN +QF+ DTT+L CL PT
Sbjct: 61  YGEQCVTYVRNITDIDDKIIERARRDHPSIAIDNAICMITEKNIKQFILDTTKLGCLIPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           HQPRAT +IPQMI LI+ II HGHAYE+NNEI+FDT+S PNYGS S+RKIDEQK G RVP
Sbjct: 121 HQPRATEYIPQMINLIEKIISHGHAYESNNEILFDTNSAPNYGSLSQRKIDEQKTGARVP 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           EKYHKKNPADF+LWK S+  EPGWESPWG GRPGWHIECSAMSS++LGK+FDIHGGGLDL
Sbjct: 181 EKYHKKNPADFVLWKTSSEEEPGWESPWGIGRPGWHIECSAMSSYHLGKLFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQSCCA R +K AN+WIHNGFLNLEG KMSKSNGNFITINELLETKKFGG+
Sbjct: 241 IFPHHENEIAQSCCAYRTDKIANVWIHNGFLNLEGHKMSKSNGNFITINELLETKKFGGQ 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           +WPAPVIRLAMLMT YREPIDFTVQRL EAEILLSKWP T+ S+G  DPAVLSAL+NDLN
Sbjct: 301 AWPAPVIRLAMLMTSYREPIDFTVQRLQEAEILLSKWPPTTESRGKPDPAVLSALFNDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TVSAIQALHKLARES KN DLLP FNASA+ILGIEV +E L+KN+SIAIEKLVQERL+LL
Sbjct: 361 TVSAIQALHKLARESIKNPDLLPTFNASANILGIEVREEPLSKNLSIAIEKLVQERLLLL 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K+K FS+AD IR+QLE KGF+LEDYK+P + QRMTRWKQK
Sbjct: 421 KIKNFSAADSIREQLECKGFVLEDYKDPKSKQRMTRWKQK 460


>gi|150395937|ref|YP_001326404.1| cysteinyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|187631642|sp|A6U7D9|SYC_SINMW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150027452|gb|ABR59569.1| cysteinyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 466

 Score =  598 bits (1542), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 276/456 (60%), Positives = 349/456 (76%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+ T+F+ IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 7   LKLYNTLTREKTDFRPIDPKNVRMYVCGPTVYDFAHIGNARPIIVFDVLFRLLRHVYGTD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI  RA +++P +P+N+AI  +T +   +F++D   L CL PT QPR
Sbjct: 67  HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTERTETRFLEDAALLGCLDPTVQPR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IP MI +I+ +I  GHAYEA  E++FDT S+  YG  S+R +DEQ+ G RV  + H
Sbjct: 127 ATENIPGMIEIIETLIAKGHAYEAEGEVLFDTRSMAEYGQLSKRNLDEQQAGARVAVEAH 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S   EPGWESPWGRGRPGWHIECSAMS  YLG+VFDIHGGG+DLIFPH
Sbjct: 187 KRNPGDFVLWKLSAGHEPGWESPWGRGRPGWHIECSAMSGRYLGEVFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN+W+HNGFL +EGRKMSKS GNFITI +LL T+KFGGR WP 
Sbjct: 247 HENEIAQSRCAHGTAVMANVWMHNGFLQVEGRKMSKSEGNFITIYDLLHTEKFGGRKWPG 306

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            V+RLAMLMTHYREPIDF+++RL EAE LLSKWP   ++ G  DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVHGSASGEADPAVVAALTDDLNTVAA 366

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           IQALH LA+++T +   L  F ASA +LG+E  +  L++ +   I+  V+ERL LLK K 
Sbjct: 367 IQALHALAQKATADARHLGAFAASAALLGVEPKEIELDEAVVQEIDGRVRERLELLKSKN 426

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462


>gi|15964864|ref|NP_385217.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307321838|ref|ZP_07601224.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|21264014|sp|Q92R20|SYC_RHIME RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15074043|emb|CAC45690.1| Probable cysteinyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306892507|gb|EFN23307.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 466

 Score =  595 bits (1534), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 276/456 (60%), Positives = 347/456 (76%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 7   LKLYNTLTREKADFRPIDPQNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYGAD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI  RA +++P +P+N+AI  +T K   QF++D T L CL PT QPR
Sbjct: 67  HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTEKTETQFLEDATVLGCLDPTVQPR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI +I+ +I  GHAYEA  E++FDT S+ +YG  S+R +DEQ+ G RV  + H
Sbjct: 127 ATENIAGMIEIIEKLIAKGHAYEAEGEVLFDTRSMDDYGQLSKRNLDEQQAGARVAVEAH 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  YLG VFDIHGGG+DLIFPH
Sbjct: 187 KKNPGDFVLWKLSAEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNFITI ELL T+KFGGR WP 
Sbjct: 247 HENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFITIYELLHTEKFGGRKWPG 306

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            V+RLAMLMTHYREPIDF+++RL EAE LLSKWP    + G  DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVYGDAAGEADPAVVTALADDLNTVAA 366

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           IQALH LA++++ +   L  F ASA +LG+   +  L++ +   I+  V+ERL LLK K 
Sbjct: 367 IQALHALAQKASADSRHLGTFAASAALLGVVPKEVELDEAVVHEIDGRVRERLELLKAKN 426

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462


>gi|307300935|ref|ZP_07580704.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|306903890|gb|EFN34476.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 466

 Score =  595 bits (1533), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 276/456 (60%), Positives = 347/456 (76%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 7   LKLYNTLTREKADFRPIDPQNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYGAD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI  RA +++P +P+N+AI  +T K   QF++D T L CL PT QPR
Sbjct: 67  HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTEKTETQFLEDATVLGCLDPTVQPR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI +I+ +I  GHAYEA  E++FDT S+ +YG  S+R +DEQ+ G RV  + H
Sbjct: 127 ATENIAGMIEIIEKLIAKGHAYEAEGEVLFDTRSMDDYGQLSKRNLDEQQAGARVAVEAH 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  YLG VFDIHGGG+DLIFPH
Sbjct: 187 KKNPGDFVLWKLSAEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNFITI ELL T+KFGGR WP 
Sbjct: 247 HENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFITIYELLHTEKFGGRKWPG 306

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            V+RLAMLMTHYREPIDF+++RL EAE LLSKWP    + G  DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVYGDAAGEADPAVVTALADDLNTVAA 366

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           IQALH LA++++ +   L  F ASA +LG+   +  L++ +   I+  V+ERL LLK K 
Sbjct: 367 IQALHALAQKASADSRHLGTFAASAALLGLVPKEVELDEAVVHEIDGRVRERLELLKAKN 426

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462


>gi|307946682|ref|ZP_07662017.1| cysteinyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770346|gb|EFO29572.1| cysteinyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 477

 Score =  588 bits (1515), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 267/458 (58%), Positives = 346/458 (75%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ NTL R   +F  I  +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLL + YG
Sbjct: 19  KGLRVTNTLTRTKEDFVPISDANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLNHLYG 78

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA ++HP +P+N+AI+ +T +   QF  D  RL CL PTH+
Sbjct: 79  GENVTYARNITDVDDKINARALRDHPDLPLNEAIAKVTERTANQFHVDIARLGCLEPTHE 138

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  MI +I  +I  G+AY A+ E++FDT+S+P YG  S+R +DEQK G R+  +
Sbjct: 139 PRATGHIGGMIAMIDTLIAKGNAYVASGEVLFDTTSMPAYGGLSKRNLDEQKAGARIAVE 198

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HKKNPADF+LWK S+  EPGW+SPWGRGRPGWHIECS MS H+LGKVFDIHGGGLDLIF
Sbjct: 199 AHKKNPADFVLWKLSSDEEPGWDSPWGRGRPGWHIECSVMSEHHLGKVFDIHGGGLDLIF 258

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA+  +K +N W+HNGFL +EGRKMSKS GNF TI+ELL+ + FGGR W
Sbjct: 259 PHHENEIAQSCCANGTKKMSNYWMHNGFLQVEGRKMSKSEGNFFTIHELLDDETFGGRKW 318

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           P  V+RLAMLMTHYREPIDF+ +RL EAE LLSKWP    +      A+L AL +DLNTV
Sbjct: 319 PGEVLRLAMLMTHYREPIDFSKKRLEEAERLLSKWPAPIETDAAPSEAILEALTDDLNTV 378

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
           +AIQ LH+LA E+ +N ++L +++ASA +LG++  K   ++  + +I+  V ERL  LK 
Sbjct: 379 AAIQVLHQLAAEAAQNPEMLGVYSASAALLGVQPVKADTSELDTSSIDARVSERLEQLKA 438

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K ++ AD IR +L ++G +L+D K+ + G+R+T W+ K
Sbjct: 439 KNWAEADRIRDELAAEGILLKDGKDAETGERVTTWEVK 476


>gi|15888416|ref|NP_354097.1| cysteinyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|24418698|sp|Q8UGG4|SYC_AGRT5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15156102|gb|AAK86882.1| cysteinyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 461

 Score =  586 bits (1511), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 276/460 (60%), Positives = 342/460 (74%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++K++NTL R+ +EF  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ 
Sbjct: 1   MSLRLKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTY RNITD+DDKI  RA +++P +P+NDAI  +T K   QF  D   L CL PT
Sbjct: 61  YGEDHVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT++I +MIYLI+ +I  GHAY+A  E++FDT S+ +YG  S+R +DEQ+ G RV 
Sbjct: 121 VEPRATDYIAEMIYLIERLIERGHAYKAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVA 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            + HKKNP DF+LWK S+  EPGWESPWG GRPGWHIECSAM+  YLG+VFDIHGGGLDL
Sbjct: 181 VEAHKKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA      AN+W+HNGF+ +EGRKMSKS GNF+TI ELL T KFGGR
Sbjct: 241 IFPHHENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGR 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            WP  V+RLAMLMTHYREPIDF+V+RL EAE LLSKWP   TS    D  VL AL +DLN
Sbjct: 301 QWPGEVLRLAMLMTHYREPIDFSVKRLEEAERLLSKWPAAETSDAAADETVLEALADDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TV+A+QALH LA  +  +   LP F ASA +LG+   K  +++ I  A++ LV+ RL +L
Sbjct: 361 TVAAVQALHALAHAANTDPSRLPAFAASAALLGVLPKKTEMDEAIVSAVDALVELRLEML 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K K F+ AD +R +L  KG  L+D K+ + G+R T W+ K
Sbjct: 421 KAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWELK 460


>gi|325292453|ref|YP_004278317.1| Cysteinyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060306|gb|ADY63997.1| Cysteinyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 461

 Score =  583 bits (1504), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 275/460 (59%), Positives = 342/460 (74%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++K++NTL R+ TEF  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVLYRLLR+ 
Sbjct: 1   MSLRLKLHNTLTREKTEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLYRLLRHV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTY RNITD+DDKI  RA +++P +P+NDAI  +T K   QF +D   L CL PT
Sbjct: 61  YGESHVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHEDVAALGCLQPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT++I +MI +I+ +I  GHAY A  E++FDT S+ +YG  S+R +DEQ+ G RV 
Sbjct: 121 VEPRATDYIAEMIDIIEKLIARGHAYAAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVA 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            + HKK P DF+LWK S+  EPGWESPWGRGRPGWHIECSAM+  YLG+VFDIHGGGLDL
Sbjct: 181 VEAHKKTPGDFVLWKLSSDNEPGWESPWGRGRPGWHIECSAMAGRYLGEVFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA   +  AN+W+HNGF+ +EGRKMSKS GNF+TI ELL T+KFGGR
Sbjct: 241 IFPHHENEIAQSRCAHGTQVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTEKFGGR 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            WP  V+RLAMLMTHYREPIDF+V+RL EAE LL+KWP    S    D  VL AL +DLN
Sbjct: 301 QWPGEVLRLAMLMTHYREPIDFSVKRLEEAERLLAKWPAAEASDAAPDETVLDALADDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TV+A+QALH LA  +  +   LP F ASA +LG+   K  +++ I  A++ LVQ RL +L
Sbjct: 361 TVAAVQALHALAHAANTDPARLPAFAASAALLGVLPKKAEVDEAIVSAVDALVQLRLEML 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K K F+ AD +R +L  KG  L+D K+ + G+R T W+ K
Sbjct: 421 KAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWELK 460


>gi|86357063|ref|YP_468955.1| cysteinyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|109894928|sp|Q2KAA8|SYC_RHIEC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86281165|gb|ABC90228.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 458

 Score =  580 bits (1495), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 267/457 (58%), Positives = 340/457 (74%), Gaps = 5/457 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+ + F+ ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 6   ELKLYNTLTREKSAFKPIDAENVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P+ +P
Sbjct: 66  DHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPSVEP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I +MI +I+ +I +GHAY A  E++FDT S+ +YG  S+R +DEQ+ G RV    
Sbjct: 126 RATDNIAEMIQIIEKLIGNGHAYVAAGEVLFDTKSMADYGELSKRPLDEQQAGARVAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKKNP DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLIFP
Sbjct: 186 HKKNPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E  AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR WP
Sbjct: 246 HHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRKWP 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             V+RLAMLMTHYREPIDF+++RL EAE LL+KWP         D +VL+AL +DLNTV+
Sbjct: 306 GEVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPTAEAGDAAPDESVLNALADDLNTVA 365

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           A+QALH LA+          +F ASA +LG+   K  +++  + A++ LV  RL +LK K
Sbjct: 366 AVQALHALAQPGND-----AVFAASAVLLGVLPKKVEIDEAFAAAVDALVAMRLEVLKAK 420

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            F  AD IR +L +KG  L+D K+P+ G+R+T W+ K
Sbjct: 421 NFVEADRIRDELGAKGIQLKDGKDPETGERVTTWEVK 457


>gi|254504528|ref|ZP_05116679.1| cysteinyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222440599|gb|EEE47278.1| cysteinyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 475

 Score =  576 bits (1484), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 268/462 (58%), Positives = 335/462 (72%), Gaps = 4/462 (0%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+ NTL R+  +F AID SN+R+YVCGPTVYDFAHIGNARP IVFDVLYRLLR+ YG
Sbjct: 13  KGLKLTNTLTRQKEDFCAIDDSNVRLYVCGPTVYDFAHIGNARPAIVFDVLYRLLRHLYG 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P+N+AI+++T K   Q+ KD   L CL PT Q
Sbjct: 73  AEHVTYARNITDVDDKINARALRDYPDMPLNEAIALVTKKTADQYQKDVAALGCLEPTVQ 132

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA----NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PRAT HI  M+ +I+ +I  GHAY A      E++FDT S+PNYG  S+RK+DEQ  G R
Sbjct: 133 PRATEHIDGMVKMIEQLIEKGHAYVAETPEGGEVLFDTVSMPNYGGLSKRKLDEQIAGAR 192

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    HKKNP DF+LWK S+P EPGW+SPWGRGRPGWHIECS MS H+LGKVFDIHGGGL
Sbjct: 193 IAVDSHKKNPGDFVLWKLSSPEEPGWDSPWGRGRPGWHIECSVMSEHHLGKVFDIHGGGL 252

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQSCCA+  +  +N W+HNGF+ +EGRKMSKS GNF TI+ELLET+ FG
Sbjct: 253 DLIFPHHENEIAQSCCANGTKTMSNYWVHNGFVQVEGRKMSKSEGNFFTIHELLETENFG 312

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
           GR WP  V+RLAMLMTHY+EPIDF+V++L EAE LL KWP    +       VL A+ +D
Sbjct: 313 GRKWPGEVLRLAMLMTHYKEPIDFSVRKLEEAENLLGKWPDLVETDAAPAADVLDAMNDD 372

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI 418
           LNT +AIQALH LA E+ K+   L  F+ASA +LG++     ++     AI   +  RL 
Sbjct: 373 LNTAAAIQALHGLAGEANKDPHKLAEFSASAALLGLKPVAADMSGIDETAIATAITARLE 432

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            L  K ++ AD IR +L S+G  L+D K+ + G R+T W  K
Sbjct: 433 ALNGKNWAEADRIRDELASQGIALKDSKDSETGARVTTWDLK 474


>gi|116251309|ref|YP_767147.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123384854|sp|Q1MJ22|SYC_RHIL3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115255957|emb|CAK07038.1| putative cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 463

 Score =  575 bits (1482), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 270/457 (59%), Positives = 344/457 (75%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+ + F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLRY YGE
Sbjct: 6   ELKLYNTLTREKSVFSPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRYVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+NDAI  +T K   QF  D   L CL P  +P
Sbjct: 66  DHVTYARNITDVDDKINARALRDHPGLPLNDAIRAVTEKTETQFHADVAELGCLEPNFEP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I +M  +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G R+    
Sbjct: 126 RATDNIVEMTEIIEKLIGNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARIAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKKNP DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLIFP
Sbjct: 186 HKKNPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGDVFDIHGGGLDLIFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNF+TI+ELL+T+ FGGR WP
Sbjct: 246 HHENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFVTIHELLQTETFGGRKWP 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             V+RLAMLMTHYREPIDF+++RL EAE LL+KWP    S    D +VL+AL +DLNTV+
Sbjct: 306 GQVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPAAEASDAAPDESVLNALSDDLNTVA 365

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           A+QALH LA+ +  +     +F A+A +LG+   K  +++ ++ A++ LV  RL +LK K
Sbjct: 366 AVQALHALAQAAHGDPTARAVFAATADLLGLLPKKMEIDEAVASAVDALVAMRLEMLKAK 425

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 426 NFTEADKIRDELTAKGIQLKDGKDAVTGERVTTWEVK 462


>gi|241203922|ref|YP_002975018.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857812|gb|ACS55479.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 463

 Score =  569 bits (1466), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/457 (58%), Positives = 343/457 (75%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+ + F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 6   ELKLYNTLTREKSVFSPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+NDAI  +T K   QF  D   L CL P+ +P
Sbjct: 66  DHVTYARNITDVDDKINARALRDHPGLPLNDAIRAVTEKTETQFHTDVAELGCLEPSFEP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I +M  +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G R+    
Sbjct: 126 RATDNIVEMTEIIEKLIGNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARIAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKK+P DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLIFP
Sbjct: 186 HKKHPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGNVFDIHGGGLDLIFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNF+TI+ELL T+ FGGR WP
Sbjct: 246 HHENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFVTIHELLHTETFGGRKWP 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             V+RLAMLMTHYREPIDF+++RL EAE LL+KWP         D +VL+AL +DLNTV+
Sbjct: 306 GQVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPAAEVGDAAPDESVLNALSDDLNTVA 365

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           A+QALH LA+ +  +     +F A+A +LG+   K  +++ ++ A++ LV  RL +LK K
Sbjct: 366 AVQALHALAQAAHTDPTASAVFAATADLLGLLPKKMEIDEAVASAVDALVAMRLEMLKAK 425

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 426 NFTEADKIRDELTAKGIQLKDGKDAVTGERVTTWEVK 462


>gi|227821436|ref|YP_002825406.1| cysteinyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340435|gb|ACP24653.1| cysteinyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 463

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 270/456 (59%), Positives = 344/456 (75%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE 
Sbjct: 4   LKLYNTLTREKADFRPIDPLNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYGES 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI  RA +++P +P+N+AI  +T K   QF+ D T L CL PT QPR
Sbjct: 64  RVTYARNITDVDDKINARALRDYPGLPLNEAIRRVTEKTETQFLDDATVLGCLEPTVQPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I +M+ +I+ ++  GHAY+A  E++FDT S+ +YG  SRR +DEQ+ G RV  + H
Sbjct: 124 ATESIAEMVEIIEKLLAKGHAYQAEGEVLFDTKSMRDYGQLSRRNLDEQQAGARVAVEAH 183

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLIFPH
Sbjct: 184 KKNPGDFVLWKLSQEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGLDLIFPH 243

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   +  AN+W+HNGFL +EGRKMSKS GNF+TI ELL T+KFGGR WP 
Sbjct: 244 HENEIAQSRCAHGTDVMANVWMHNGFLQVEGRKMSKSEGNFVTIYELLHTEKFGGRQWPG 303

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            V+RLAMLMTHYREPIDF+++RL EAE LLS+WP    + G  D A+++AL +DLNTV+A
Sbjct: 304 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSRWPVPGEAAGEADAAIVAALADDLNTVAA 363

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           IQALH LA++++ +   L  F ASA +LG+   +  L+  +   I+  V+ RL LLK K 
Sbjct: 364 IQALHALAQKASVDAQYLGAFAASAALLGVLPKEIELDVAVVEEIDGRVRARLELLKAKN 423

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 424 YAEADAIRADLLARGIQLKDGKDPETGERVTTWEVK 459


>gi|222085422|ref|YP_002543952.1| cysteinyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|254765171|sp|B9JCA5|SYC_AGRRK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221722870|gb|ACM26026.1| cysteinyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 463

 Score =  566 bits (1460), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 274/457 (59%), Positives = 342/457 (74%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+  +FQ ID  N+R+YVCGPTVYDFAHIGNARP IVFDVL+RLLR  YGE
Sbjct: 6   QLKLYNTLTREKVDFQPIDRENVRLYVCGPTVYDFAHIGNARPAIVFDVLFRLLRQVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+N+AI ++T K   Q+ +DTT L CL PT QP
Sbjct: 66  NHVTYARNITDVDDKINARALRDHPGLPLNEAIRLVTEKTETQYYQDTTALGCLEPTVQP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I QMI +I+ +I  GHAY+A  E++FDT S+ +YG  S+R +DEQ+ G R+    
Sbjct: 126 RATDNIAQMIEIIEKLIARGHAYQAAGEVLFDTKSMADYGQLSKRNLDEQQAGARIAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKK+P DF+LWK S   EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLIFP
Sbjct: 186 HKKSPGDFVLWKLSAENEPGWESPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGLDLIFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +  AN+W+HNGFL +EGRKMSKS GNF+TI ELL+T+K GGR+WP
Sbjct: 246 HHENEIAQSRCAHGTDVMANVWMHNGFLQVEGRKMSKSEGNFVTIYELLQTEKLGGRTWP 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             V+RLAMLMTHYREPIDF+V+RL EAE LL+KWP         D  VL AL +DLNTV 
Sbjct: 306 GAVLRLAMLMTHYREPIDFSVKRLEEAERLLAKWPAADIGNAKPDATVLVALADDLNTVV 365

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           AIQALH LA+ +  +  +LP+F ASA +LG+   K  ++  ++  I+  V+ RL LLK K
Sbjct: 366 AIQALHALAQAANADASILPVFAASAALLGLLPEKVEMDDAVASEIDARVRARLELLKAK 425

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            F+ AD IR  L ++G  L+D K+P  G+R+T W+ K
Sbjct: 426 NFAEADKIRDTLLAEGIQLKDGKDPATGERITTWEVK 462


>gi|118588096|ref|ZP_01545506.1| cysteinyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118439718|gb|EAV46349.1| cysteinyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 471

 Score =  564 bits (1454), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 261/458 (56%), Positives = 332/458 (72%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+ NTL R+  +F+AID  N+R+YVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 13  KGLKLTNTLTRQKEDFRAIDDGNVRLYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY RNITD+DDKI  RA ++ P +P+N+AI+ +T K   QF KD   L  L P+ +
Sbjct: 73  ADHVTYARNITDVDDKINARALRDFPDLPLNEAIARVTQKTADQFHKDIRSLGVLEPSIE 132

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  M+ +I  +I  GHAY+A  E++FDT S+P+YG  S+RK+DEQ  G R+   
Sbjct: 133 PRATQHIGGMVEMIAALIEKGHAYQAGGEVLFDTQSMPDYGGLSKRKLDEQLAGARIAVD 192

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECS MS+ +LG+VFDIHGGGLDLIF
Sbjct: 193 AHKKNPGDFVLWKLSSDEEPGWDSPWGRGRPGWHIECSVMSAQHLGEVFDIHGGGLDLIF 252

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  AN W+HNGFL +EGRKMSKS GNF TI ELLET  FGGR W
Sbjct: 253 PHHENEIAQSRCAHGTKVMANYWMHNGFLQVEGRKMSKSEGNFFTIQELLETDSFGGRKW 312

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           P  V+RLAMLMT+YREPIDF+ ++L EAE LL++WP    +       VL AL +DLNT 
Sbjct: 313 PGEVLRLAMLMTNYREPIDFSKRKLEEAENLLARWPDPVETDAAPAAEVLDALLDDLNTA 372

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
            AIQALH LA E++K+   L +++ASA +LG+   K  L+     AI+  +++RL  L  
Sbjct: 373 GAIQALHALAVEASKDPAKLTVYSASAALLGVHPVKADLSGVDEAAIQAAIEKRLEALNA 432

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K ++ AD IR  L S+G +L+D K+ + G R+T W+ K
Sbjct: 433 KNWAEADAIRDDLTSQGILLKDSKDSETGARVTTWEVK 470


>gi|327187990|gb|EGE55220.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 463

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 267/457 (58%), Positives = 343/457 (75%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+ + F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 6   ELKLYNTLTREKSVFAPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P  +P
Sbjct: 66  SHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNVEP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G RV    
Sbjct: 126 RATDNIEEMIEIIEKLISNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLIFP
Sbjct: 186 HKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E  AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR WP
Sbjct: 246 HHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRKWP 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T       D AV++AL +DLNTV+
Sbjct: 306 GAVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDASPDEAVMNALADDLNTVA 365

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           A+QALH LA+ +  +  +   F A+A +LG+   K  +++ ++ A++ LV  RL +LK K
Sbjct: 366 AVQALHALAQAAHTDAAIGATFAATAFLLGVLPKKAEIDEAVAAAVDALVAMRLEMLKAK 425

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            F+ AD IR QL +KG  L+D K+   G+R+T W+ K
Sbjct: 426 NFAEADKIRDQLTTKGIQLKDGKDAATGERVTTWEVK 462


>gi|190891109|ref|YP_001977651.1| cysteinyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|229558782|sp|B3PUS4|SYC_RHIE6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|190696388|gb|ACE90473.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 463

 Score =  545 bits (1404), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/457 (58%), Positives = 344/457 (75%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+ + F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 6   ELKLYNTLTREKSVFAPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P  +P
Sbjct: 66  SHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNVEP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G RV    
Sbjct: 126 RATDNIEEMIEIIEKLISNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLIFP
Sbjct: 186 HKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E  AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR WP
Sbjct: 246 HHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRKWP 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T       D AV++AL +DLNTV+
Sbjct: 306 GAVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDAKPDEAVMNALADDLNTVA 365

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           A+QALH LA+ +  +  +   F A+A +LG+   K  +++ ++ A++ LV  RL +LK K
Sbjct: 366 AVQALHALAQAAHTDAAVGATFAATAFLLGVLPKKAEIDEAVAAAVDALVAIRLEMLKAK 425

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 426 NFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 462


>gi|319784480|ref|YP_004143956.1| cysteinyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170368|gb|ADV13906.1| cysteinyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 478

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 258/475 (54%), Positives = 329/475 (69%), Gaps = 20/475 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++YNTL R   +F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   QGLRLYNTLTRTKEDFVPIDPLNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQE------HPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +  VTYVRNITD+DDKI  RA ++        ++ +N+AI  +T K   QF  D   L C
Sbjct: 66  QTHVTYVRNITDVDDKINARALRDFGGEIASGTLSLNEAIRRVTEKTADQFHSDVAVLGC 125

Query: 117 LAPTHQPRATNHIP-------QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           L PT +PRAT  +         MI LIQ++I  GHAY A  E++FDT+S+P+YG  S+R 
Sbjct: 126 LEPTVEPRATEFVEPRADGKVDMITLIQSLIERGHAYVAAGEVLFDTASMPDYGQLSKRN 185

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +DEQ+ G RV    HKKNP DF+LWK S+P EPGW SPWGRGRPGWHIECSAMS+ YLG+
Sbjct: 186 LDEQQAGARVAVDAHKKNPGDFVLWKLSSPEEPGWNSPWGRGRPGWHIECSAMSAAYLGE 245

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           VFDIHGGGLDLIFPHHENEIAQS CA   E  ANIW+HNGFL +EG+KMSKS GNF +IN
Sbjct: 246 VFDIHGGGLDLIFPHHENEIAQSRCAHGTEMMANIWMHNGFLQVEGQKMSKSLGNFYSIN 305

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKG 345
           ELLET+ FGGR WP  V+RLAMLMTHYREPIDF+V++L EAE  L KW + +    T+ G
Sbjct: 306 ELLETETFGGRKWPGEVLRLAMLMTHYREPIDFSVRKLEEAENTLRKWKRGADLAPTAAG 365

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
            +   ++ AL +DL T +A Q L +LA E+   +D      AS   LG +V    +++  
Sbjct: 366 QVPVEIIDALSDDLATYAAFQVLTQLAGEAMDGNDAAASLKASLLFLGFDVASAKVDEG- 424

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              + K + +RL  +  K ++ AD IR  L ++G  L+D K+P  G+R+T W+ K
Sbjct: 425 --HVGKAIAKRLAFIAAKSWAEADRIRDDLLAQGIQLKDGKDPVTGERITTWEVK 477


>gi|209548641|ref|YP_002280558.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226710847|sp|B5ZWB3|SYC_RHILW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|209534397|gb|ACI54332.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 463

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 266/457 (58%), Positives = 338/457 (73%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+ T F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 6   ELKLYNTLTREETVFAPIDPDNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+N AI  +T +   QF  D   L CL P+ +P
Sbjct: 66  DHVTYARNITDVDDKINARALRDHPGLPLNQAIRAVTERTETQFHADVAELGCLEPSVEP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I +M  +I+ +I +GHAY A  E++FDT S+ +YG  S+R +DEQ+ G R+    
Sbjct: 126 RATDNIVEMTEIIEKLIGNGHAYVAAGEVLFDTKSMADYGQLSKRPLDEQQAGARIAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKKN  DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLIFP
Sbjct: 186 HKKNSGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGDVFDIHGGGLDLIFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E  ANIW+HNGFL +EGRKMSKS GNF+TI++LL T+ FGGR WP
Sbjct: 246 HHENEIAQSRCAHGTEVMANIWMHNGFLQVEGRKMSKSEGNFVTIHDLLHTQIFGGRKWP 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T       D  VL+AL ++LNTV+
Sbjct: 306 GEVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDAEPDETVLNALADNLNTVA 365

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           A+QALH LA+ +  +      F A+A +LG+   K  +++ ++ A++ LV  RL +LK K
Sbjct: 366 AVQALHALAQAAHTDPAAGARFAATAALLGLLPKKAEIDEAVAAAVDALVAMRLEMLKAK 425

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 426 NFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 462


>gi|13476470|ref|NP_108040.1| cysteinyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|21264021|sp|Q984X8|SYC_RHILO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|14027231|dbj|BAB54185.1| cysteine-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 477

 Score =  526 bits (1354), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 257/474 (54%), Positives = 332/474 (70%), Gaps = 19/474 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++YNTL R  T+F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   QGLRLYNTLTRAKTDFVPIDALNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLAC 116
           +  VTYVRNITD+DDKI  RA ++  S      + +N+AI  +T K   QF +D   L C
Sbjct: 66  QAHVTYVRNITDVDDKINARALRDFGSEISAGKLSLNEAIRRVTEKTADQFHRDVATLGC 125

Query: 117 LAPTHQPRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           L PT +PRAT  +         MI LIQ++I  GHAY A  E++FDT+S+P+YG  S+R 
Sbjct: 126 LEPTVEPRATEFVEPRADGKADMITLIQSLIKRGHAYAAAGEVLFDTASMPDYGQLSKRN 185

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +DEQ+ G RV    HKKNP DF+LWK S+P EPGW+SPWGRGRPGWHIECSAMS+ YLG+
Sbjct: 186 LDEQQAGARVAVDAHKKNPGDFVLWKLSSPEEPGWQSPWGRGRPGWHIECSAMSAAYLGE 245

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           VFDIHGGGLDLIFPHHENEIAQS CA      AN+W+HNGFL +EG+KMSKS GNF +I+
Sbjct: 246 VFDIHGGGLDLIFPHHENEIAQSRCAHGTSVMANVWMHNGFLQVEGQKMSKSLGNFYSIH 305

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGI 346
           ELLET+ FGGRSWP  V+RLAMLMTHYREPIDF+V++L EAE  L KW + +    + G 
Sbjct: 306 ELLETETFGGRSWPGEVLRLAMLMTHYREPIDFSVRKLEEAENTLRKWKRAADLAPAAGQ 365

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
           +   V+ AL +DL T +A Q L +LA E+   ++      AS   LG +V    ++++  
Sbjct: 366 LPVEVIDALSDDLATYAAFQVLTQLAGEAADGNEAAAALKASLLFLGFDVASADIDED-- 423

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             + K +  RL L+  K ++ AD IR +L ++G  L+D K+P  G+R+T W+ K
Sbjct: 424 -GVAKAIANRLALIAAKNWTEADRIRDELLAQGVQLKDGKDPVTGERITTWEVK 476


>gi|260462295|ref|ZP_05810503.1| cysteinyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259031789|gb|EEW33057.1| cysteinyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 482

 Score =  512 bits (1318), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 251/479 (52%), Positives = 329/479 (68%), Gaps = 24/479 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++YNTL R   +F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   KGLRLYNTLTRTKADFTPIDALNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLAC 116
           E  VTYVRNITD+DDKI  RA ++         + +N+AI  +T K   QF +D   L C
Sbjct: 66  ETHVTYVRNITDVDDKINARALRDFGDEISAGKLSLNEAIRRVTEKTADQFHRDVATLGC 125

Query: 117 LAPTHQPRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           L PT +PRAT  +         MI LIQ++I  GHAY A  E++FDT+S+P+YG  S+R 
Sbjct: 126 LEPTVEPRATEFVEPRADGKADMISLIQSLIERGHAYVAAGEVLFDTASMPDYGQLSKRN 185

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +DEQ+ G R+    HKKNP DF+LWK S+P EPGW SPWGRGRPGWHIECSAMS+ YLG+
Sbjct: 186 LDEQQAGARIAVDAHKKNPGDFVLWKLSSPEEPGWRSPWGRGRPGWHIECSAMSAAYLGE 245

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           VFDIHGGGLDLIFPHHENEIAQS CA   +  AN+W+HNGFL +EG+KMSKS GNF +I+
Sbjct: 246 VFDIHGGGLDLIFPHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGQKMSKSLGNFYSIH 305

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGI 346
           ELLET+ FGGR+WP  V+RLAMLMTHYREPIDF++++L EAE  L KW + +    + G 
Sbjct: 306 ELLETETFGGRNWPGEVLRLAMLMTHYREPIDFSMRKLEEAENTLRKWKRAADLAPTAGQ 365

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILGIEVCKEHL 401
           +   V+ AL +DL T +A Q L +LA E+++      +       A+   LG ++    +
Sbjct: 366 LPAKVVEALSDDLATYAAFQQLTQLAGEASEVEGHGENAAAASLKAALLFLGFDIGAARV 425

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++     + + +  RL L+  K ++ AD IR  L ++G  L+D K+P  G+R+T W+ K
Sbjct: 426 DE---AEVARSIARRLELIAAKNWAEADRIRDDLLAQGVQLKDGKDPVTGERVTTWEVK 481


>gi|328544357|ref|YP_004304466.1| Cysteine tRNA synthetase (Cysteine--tRNA ligase) [polymorphum
           gilvum SL003B-26A1]
 gi|326414099|gb|ADZ71162.1| Cysteine tRNA synthetase (Cysteine--tRNA ligase) [Polymorphum
           gilvum SL003B-26A1]
          Length = 514

 Score =  509 bits (1311), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 257/508 (50%), Positives = 323/508 (63%), Gaps = 53/508 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++YNTL R   +F  IDP+N+RMYVCGPTVYDFAHIGNARP IVFDVLYRLLR+ YG
Sbjct: 9   KGLRLYNTLTRAKQDFVPIDPANVRMYVCGPTVYDFAHIGNARPAIVFDVLYRLLRHLYG 68

Query: 63  EKCVTYVRNITDIDDKIIERARQ------EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
              VTYVRNITD+DDKI  RA +      E   + +NDAI+ +T K   Q+  D + L C
Sbjct: 69  ADRVTYVRNITDVDDKINARALRDFGPEIEAGRMSLNDAIARVTEKTADQYHSDVSALGC 128

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L PTH+PRAT HI  MI +I  +I  GHAYEA  E++FD +S+P YG  S+R +DEQ  G
Sbjct: 129 LPPTHEPRATEHIEGMIVMIGTLIERGHAYEAAGEVLFDVASMPAYGGLSKRNLDEQIAG 188

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            RV    HKKNP DF+LWK+S+  EPGW SPWGRGRPGWHIECS MS H+LGKVFDIHGG
Sbjct: 189 ARVAVDSHKKNPGDFVLWKQSSAEEPGWGSPWGRGRPGWHIECSVMSEHHLGKVFDIHGG 248

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDLIFPHHENEIAQSCCA   +K AN W+HNGF+ +EGRKMSKS GNF+TI++LL T  
Sbjct: 249 GLDLIFPHHENEIAQSCCAHGTDKMANYWLHNGFVQVEGRKMSKSEGNFVTIHDLLHTDT 308

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
           FGGR WP  V+RLAMLMTHYREPIDF+V+RL EA   L+ W +            +    
Sbjct: 309 FGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEANANLTNWLRQIDEHVLSRNSPTAYSA 368

Query: 346 IIDPA-----------VLSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFN 386
           I+D A            +  L +DL   + I  LH ++ +         +   D++ I  
Sbjct: 369 ILDAAQNNDQNDNLAISVEVLSDDLAMPNVIAQLHGMSTDISLGVRSPRSLAWDMMGILG 428

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLIL--------------LKMKKFSSADYIR 432
               I+  EV +    K     + + + ERL +              L  +KF+ AD IR
Sbjct: 429 FLG-IIDAEVLRRQ--KVEPEGLSQRIAERLAIQDAADAAKAAGDKDLMKQKFAEADRIR 485

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
             L ++G +L+D K+P  GQR+T W+ K
Sbjct: 486 ADLAAEGILLKDGKDPQTGQRVTTWEVK 513


>gi|92117041|ref|YP_576770.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083715|sp|Q1QN87|SYC_NITHX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91799935|gb|ABE62310.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 482

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 249/479 (51%), Positives = 320/479 (66%), Gaps = 25/479 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL ++   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLL++ YG 
Sbjct: 2   ELRLYDTLTKEKRAFIPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLQHIYGT 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI +RA ++ P +P+N+AI  +T K  +QF  D   L CL PTHQP
Sbjct: 62  DHVTYVRNITDVDDKINDRAARDFPGLPLNEAIRKVTEKTAEQFQADVAALGCLPPTHQP 121

Query: 124 RATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           RAT  +         M+ LI+ +I  GHAYEA  E++FD  S+P+YG+ S R+++EQK G
Sbjct: 122 RATEFVLPRDDGRADMVTLIKQLIARGHAYEAGGEVLFDVQSMPDYGALSGRRLEEQKAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            RV    HK+NPADF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHGG
Sbjct: 182 ARVAVDAHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHGG 241

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF TINELL T+K
Sbjct: 242 GLDLIFPHHENEIAQSRCAHGTHTMANYWMHNGFLQVEGEKMSKSLGNFFTINELLTTEK 301

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVL 352
           FGGR WP  V+RLAML THYR PID+TV  L E++ +L  W       + + G +D  V 
Sbjct: 302 FGGRKWPGEVLRLAMLKTHYRSPIDWTVDALEESKRILDSWYDIVGDDTEAIGEVDREVS 361

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPI-----FNASAHILGI--EVCKEHLNKNI 405
           + L +DLNT +A+  LH +A         L I        SA +LG+     +E+L  + 
Sbjct: 362 AFLGDDLNTSAAVTRLHAIAASRIGKSGQLQIDAKRKLKVSAVMLGLLGRTKREYLETDP 421

Query: 406 SI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +       +  L+ +R      K F  +D IR +L + G +L+D K+ D G+  T W+
Sbjct: 422 QVILVDSNLVAHLLSDRAAARARKDFKESDRIRDELAAMGVVLKDGKDAD-GKPETTWE 479


>gi|75675421|ref|YP_317842.1| cysteinyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|109894914|sp|Q3STA1|SYC_NITWN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|74420291|gb|ABA04490.1| cysteinyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 477

 Score =  503 bits (1296), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 247/476 (51%), Positives = 317/476 (66%), Gaps = 26/476 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL R+   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG+ 
Sbjct: 3   LRLYDTLTRRKRAFTPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGDD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI +RA ++ P +P+N+AI  +T K   QF  D   L CL PTHQPR
Sbjct: 63  HVTYARNITDVDDKINDRAARDFPDLPLNEAIRKVTEKTAAQFQADVAALGCLPPTHQPR 122

Query: 125 ATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           AT  +         M+  I+ +I  GHAYEA  E++FD  S+P+YG+ S R++DEQK G 
Sbjct: 123 ATEFVLPRTDGKTDMVTFIKQLIARGHAYEAGGEVLFDVRSMPDYGALSGRRLDEQKAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           RV    HK+NPADF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHGGG
Sbjct: 183 RVAVDAHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSTAYLGDVFDIHGGG 242

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL T+KF
Sbjct: 243 LDLIFPHHENEIAQSRCAHGTHAMANYWMHNGFLQVEGEKMSKSLGNFVTINELLTTEKF 302

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTS 343
           GGR WP  V+RL ML THYR+PID+T++ L E+E +L +               P    S
Sbjct: 303 GGRKWPGEVLRLNMLRTHYRQPIDWTIKALEESETILRRVCGRIKQFEYARRGMPTKERS 362

Query: 344 KGI-IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
             + + P +L AL +DLNT   +  + +L+ +   +H LL I      +L          
Sbjct: 363 VQLNLPPEILEALVDDLNTPLMLSRIGELSYDDAFDHALLSI---GIDVLSYARWLRSQE 419

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +  S  +++LV  RL     K F  +D IR +L + G +L+D K+ D G+ +T W+
Sbjct: 420 QYASSNVDELVVARLEARMRKDFKESDRIRDELAAMGVVLKDGKDAD-GKPVTTWE 474


>gi|90420879|ref|ZP_01228784.1| cysteine--tRNA ligase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334854|gb|EAS48626.1| cysteine--tRNA ligase [Aurantimonas manganoxydans SI85-9A1]
          Length = 494

 Score =  501 bits (1291), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 246/495 (49%), Positives = 322/495 (65%), Gaps = 44/495 (8%)

Query: 3   KKIKIYNTLERKITEFQAID---------PSNIRMYVCGPTVYDFAHIGNARPMIVFDVL 53
           + + ++NT++R   EF+ +D           ++RMYVCGPTVYD+AHIGNARP+IVFDVL
Sbjct: 6   RGLTLWNTMKRAKEEFRPLDWQDPGKAEAGRHVRMYVCGPTVYDYAHIGNARPVIVFDVL 65

Query: 54  YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           YRLLR+ YG   VTYVRNITD+DDKI  RA +++P +P+N AI+ +T     QF  D   
Sbjct: 66  YRLLRHLYGADHVTYVRNITDVDDKINRRAARDYPDLPLNAAIAKVTQATADQFHADVAA 125

Query: 114 LACLAPTHQPRATNHIP------QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
           L CL P H+PRAT+ +        M+ +I  +I  GHAYEA  E++FD +S+ +YG  S 
Sbjct: 126 LGCLPPDHEPRATDFVTGRSDGHDMVSMIATLIEKGHAYEAGGEVLFDVTSMADYGQLSN 185

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR-------------GRPG 214
           RK+DEQ+ G R+  + HK+NP DF+LWK S+  EPGWE+PWGR             GRPG
Sbjct: 186 RKLDEQRAGARIAVEGHKRNPGDFVLWKLSSEGEPGWEAPWGREAWEASGRTGMPKGRPG 245

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECSAMS  YLG+ FDIHGGGLDLIFPHHENEIAQS CA      A +W+HNG+L LE
Sbjct: 246 WHIECSAMSEAYLGQTFDIHGGGLDLIFPHHENEIAQSRCAHGTAAMAQVWMHNGYLQLE 305

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           GRKMSKS+GNF+TI++LL T +FG RSW   V+RLAMLMT YREPIDF+V+RL EAE  L
Sbjct: 306 GRKMSKSDGNFVTIHDLLHTDRFGRRSWAGAVLRLAMLMTQYREPIDFSVKRLEEAEEAL 365

Query: 335 SKWPQTSTSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           + W +         P+   L+AL +DL + +AI  LH L +             AS  ++
Sbjct: 366 AGWARAVADVAPSAPSERFLAALSDDLASAAAIAELHALRKGDPA------ALRASLDLI 419

Query: 393 GIEVCKEHLNKNISI-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           GI+V   +L     +       AI   + ERL LL+ K F+ AD IR +L ++G  L+D 
Sbjct: 420 GIDVAG-YLAATSDLAAPVPADAIAARIAERLDLLRGKNFAEADRIRDELLAEGIQLKDG 478

Query: 446 KNPDNGQRMTRWKQK 460
           K+PD G+R+T W+ K
Sbjct: 479 KDPDTGERITTWEMK 493


>gi|110633319|ref|YP_673527.1| cysteinyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284303|gb|ABG62362.1| cysteinyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 506

 Score =  500 bits (1287), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/491 (50%), Positives = 325/491 (66%), Gaps = 33/491 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+YNTL R+  EF  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG
Sbjct: 15  KALKLYNTLTRRDEEFVPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRQLYG 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLAC 116
           +  VTYVRNITD+DDKI  RA ++         + +N+AI  +T +   QF  D   L C
Sbjct: 75  DDHVTYVRNITDVDDKINARALRDFGEDITAGRLTLNEAIRRVTERTAAQFHADVAALGC 134

Query: 117 LAPTHQPRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           LAPTH+PRAT  +         M  LIQ +I  GHAY A  EI+FDT+S+P+YG  S+R+
Sbjct: 135 LAPTHEPRATEFVLPRTDGKADMASLIQTLIDRGHAYAAKGEILFDTASMPDYGQLSKRR 194

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSA 221
           +++Q+ G RV    HK+NP+DF+LWK S+  EPGWE  +         RGRPGWHIECSA
Sbjct: 195 LEDQQAGARVAVDPHKRNPSDFVLWKESSAEEPGWEGRFTFEGKPLVIRGRPGWHIECSA 254

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS+ YLG+VFDIHGGGLDLIFPHHENEIAQS CA      AN W+HNGF+ +EG+KM+KS
Sbjct: 255 MSAAYLGEVFDIHGGGLDLIFPHHENEIAQSRCAHGTPVMANYWLHNGFVQVEGKKMAKS 314

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GNF+TI++LL T+ FGGR WP  V+RLA+LMTHYREP+DF++++L EAE +L  W +  
Sbjct: 315 EGNFVTIHDLLATENFGGRKWPGEVLRLAILMTHYREPLDFSLRKLEEAEAVLDGWYRVV 374

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEV- 396
             +  +     AV  AL +DL T +AI  LH L  ++ +  +       A+A +LG+   
Sbjct: 375 GDAKHQEGDSGAVRRALLDDLGTPAAITVLHDLRAQAARGSEAAKADLKANAVLLGLLTQ 434

Query: 397 -------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                   K         A+E+ V  RL LL+ K F  AD IR++L  +G  L DYK+P+
Sbjct: 435 SQDQWFSGKAADAAIDEAAVEERVAARLSLLRAKNFPEADRIREELSGRGIQLMDYKDPE 494

Query: 450 NGQRMTRWKQK 460
            G+R T+W+ K
Sbjct: 495 TGERRTKWEVK 505


>gi|187631655|sp|Q11JR3|SYC_MESSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 497

 Score =  499 bits (1286), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 248/491 (50%), Positives = 325/491 (66%), Gaps = 33/491 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+YNTL R+  EF  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG
Sbjct: 6   KALKLYNTLTRRDEEFVPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRQLYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLAC 116
           +  VTYVRNITD+DDKI  RA ++         + +N+AI  +T +   QF  D   L C
Sbjct: 66  DDHVTYVRNITDVDDKINARALRDFGEDITAGRLTLNEAIRRVTERTAAQFHADVAALGC 125

Query: 117 LAPTHQPRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           LAPTH+PRAT  +         M  LIQ +I  GHAY A  EI+FDT+S+P+YG  S+R+
Sbjct: 126 LAPTHEPRATEFVLPRTDGKADMASLIQTLIDRGHAYAAKGEILFDTASMPDYGQLSKRR 185

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSA 221
           +++Q+ G RV    HK+NP+DF+LWK S+  EPGWE  +         RGRPGWHIECSA
Sbjct: 186 LEDQQAGARVAVDPHKRNPSDFVLWKESSAEEPGWEGRFTFEGKPLVIRGRPGWHIECSA 245

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS+ YLG+VFDIHGGGLDLIFPHHENEIAQS CA      AN W+HNGF+ +EG+KM+KS
Sbjct: 246 MSAAYLGEVFDIHGGGLDLIFPHHENEIAQSRCAHGTPVMANYWLHNGFVQVEGKKMAKS 305

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GNF+TI++LL T+ FGGR WP  V+RLA+LMTHYREP+DF++++L EAE +L  W +  
Sbjct: 306 EGNFVTIHDLLATENFGGRKWPGEVLRLAILMTHYREPLDFSLRKLEEAEAVLDGWYRVV 365

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEV- 396
             +  +     AV  AL +DL T +AI  LH L  ++ +  +       A+A +LG+   
Sbjct: 366 GDAKHQEGDSGAVRRALLDDLGTPAAITVLHDLRAQAARGSEAAKADLKANAVLLGLLTQ 425

Query: 397 -------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                   K         A+E+ V  RL LL+ K F  AD IR++L  +G  L DYK+P+
Sbjct: 426 SQDQWFSGKAADAAIDEAAVEERVAARLSLLRAKNFPEADRIREELSGRGIQLMDYKDPE 485

Query: 450 NGQRMTRWKQK 460
            G+R T+W+ K
Sbjct: 486 TGERRTKWEVK 496


>gi|163760568|ref|ZP_02167649.1| cysteinyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282183|gb|EDQ32473.1| cysteinyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 505

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 249/502 (49%), Positives = 321/502 (63%), Gaps = 45/502 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K +NTL R   EFQ ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 3   ELKFWNTLTRVKEEFQPIDKDNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI  RA +++P +P+N+AI+ +T K   +F KD   L CL PTH+P
Sbjct: 63  DHVTYVRNITDVDDKINARALRDYPDLPLNEAIAKVTEKTANRFHKDAAALGCLEPTHEP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           RAT HI  M+ +IQ +I  G+AY        E++F  SS+P+YG  S RK ++Q+ G R+
Sbjct: 123 RATAHIDGMVKMIQTLIDKGNAYVTSGREGREVLFAVSSMPDYGKLSNRKPEDQQAGARI 182

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGKVF 231
             + HK+NPADF+LWK S   EPGW+  +          GRPGWHIECS MS H+LG  F
Sbjct: 183 AVEDHKRNPADFVLWKESASDEPGWDGVFADGGQTISIHGRPGWHIECSVMSEHHLGATF 242

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDLIFPHHENEIAQSCCA   ++ AN+W+HNGFL +EG+KMSKS+GNF+TI EL
Sbjct: 243 DIHGGGLDLIFPHHENEIAQSCCAHGNDRMANLWMHNGFLQVEGKKMSKSDGNFVTIAEL 302

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----- 346
           LET KFGGR WP  V+RLAMLMTHYREPIDF+V+RL EA I LS W      +G+     
Sbjct: 303 LETDKFGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEANISLSNWLGPHARRGVPEDGS 362

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--------------------LPIFN 386
           +   V+ AL +DL+  +A   +  +  ES K  DL                    L +  
Sbjct: 363 VSKEVVRALSDDLDFSAAKLVIDFMLAESRKVTDLDQESIGKTKLRNDLAATLVWLGLAK 422

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKL--------VQERLILLKMKKFSSADYIRKQLESK 438
                      K+ L   +  A+  L        V ERL  +  K ++ AD IR +L ++
Sbjct: 423 QDEDFAVARANKQGLRAVVEAALVGLKASDVDSRVNERLAFIAAKNWAEADRIRDELLAQ 482

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G  L+D K+P+ G+R+T W+ K
Sbjct: 483 GIQLKDGKDPETGERVTTWEVK 504


>gi|85715405|ref|ZP_01046387.1| cysteinyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85697826|gb|EAQ35701.1| cysteinyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 477

 Score =  493 bits (1268), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 244/482 (50%), Positives = 317/482 (65%), Gaps = 36/482 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL ++   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG 
Sbjct: 2   ELRLYDTLTKQKRVFDPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRNLYGA 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI +RA ++ P + +N+AI  +T K   QF  D   L CL PTHQP
Sbjct: 62  DHVTYVRNITDVDDKINDRAARDFPGLSLNEAIRKVTEKTAAQFQADVAALGCLPPTHQP 121

Query: 124 RATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           RAT  +         M+  I+ +I  GHAY+A  E++FD  S+P+YG+ S R+++EQK G
Sbjct: 122 RATEFVLPRADGKTDMVTFIKQLIARGHAYKAGGEVLFDVRSMPDYGALSGRRLEEQKAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            R+    HK+NPADF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG+VFDIHGG
Sbjct: 182 ARIAVDEHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSAAYLGEVFDIHGG 241

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL T K
Sbjct: 242 GLDLIFPHHENEIAQSRCAHGSHAMANYWMHNGFLQVEGEKMSKSLGNFVTINELLTTGK 301

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTS 341
           FGGR WP  V+RL ML THYR+PID+T + L E+E +L +                 +  
Sbjct: 302 FGGRKWPGEVLRLNMLRTHYRQPIDWTTKALEESETILRRICGRIKQFDDARRGMAMKER 361

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK--- 398
           + +  + P +L AL +DLNT   I  + +L      NHD    F+ +   +GI+V     
Sbjct: 362 SGQPKLSPEILEALVDDLNTPLMISRVGEL------NHD--DAFDQALLSIGIDVFSYAR 413

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                 +     +++LV  RL   K K F  +D IR +L + G +L+D K+ D G+ +T 
Sbjct: 414 WLRSQEQQAGSNVDELVAARLEARKRKDFKESDRIRDELAAMGVVLKDSKDAD-GKPVTT 472

Query: 457 WK 458
           W+
Sbjct: 473 WE 474


>gi|299133613|ref|ZP_07026807.1| cysteinyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591449|gb|EFI51650.1| cysteinyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 464

 Score =  484 bits (1245), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/461 (50%), Positives = 308/461 (66%), Gaps = 25/461 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL +    F+ IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 2   ELRLYDTLTKDKRAFKPIDPRNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRNITD+DDKI +RA +++P +P+N+AI  +T K   QF  D   L CL PT +P
Sbjct: 62  QHVTYVRNITDVDDKINDRALRDYPGLPLNEAIRKVTEKTATQFHADVDALGCLKPTVEP 121

Query: 124 RATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           RAT+ +         M+ LI+ +I  GHAYEAN E++FDT+S+P+YG  S R++DEQ+ G
Sbjct: 122 RATDFVLPRADGKADMVSLIKTLIDRGHAYEANGEVLFDTASMPDYGKLSGRRLDEQQAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            R+    HKK+PADF+LWK+S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHGG
Sbjct: 182 ARIAVDAHKKHPADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHGG 241

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL    
Sbjct: 242 GLDLIFPHHENEIAQSRCAHGTHAMANYWLHNGFLQVEGEKMSKSLGNFVTINELL---- 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--VLSA 354
              + WP  V+RL ML THYR PID+TV+ L E+  +L  W  T+       PA  VL  
Sbjct: 298 ---KDWPGEVVRLNMLKTHYRSPIDWTVKGLEESAKVLDDWYATAGDIKGSAPAGTVLDT 354

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL-LPIFNASAHILGI--------EVCKEHLNKNI 405
           L +DLNT   + ALH L  ++ +  +     F +S  +LG         +  K+  +   
Sbjct: 355 LADDLNTAQTVAALHGLRHQAERGGEAERNEFASSLRLLGFLAETRADWDARKQEASGVD 414

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +  L+ +R      K +  +D IR +L + G  ++D K
Sbjct: 415 AAQVSALIADRTAARARKDWKESDRIRDELAAMGVAIKDSK 455


>gi|114704768|ref|ZP_01437676.1| cysteinyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539553|gb|EAU42673.1| cysteinyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 559

 Score =  474 bits (1219), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 250/555 (45%), Positives = 330/555 (59%), Gaps = 99/555 (17%)

Query: 3   KKIKIYNTLERKITEFQAID---------PSNIRMYVCGPTVYDFAHIGNARPMIVFDVL 53
           + +++ NT+ R+  +F  +D            +RMYVCGPTVYD+AHIGNARPMIVFDVL
Sbjct: 6   RGLRLSNTMTRQKEDFVPLDWRDAEIPEAEKRVRMYVCGPTVYDYAHIGNARPMIVFDVL 65

Query: 54  YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           +RLLR+ YGE  V Y RNITD+DDKI  RA ++ P +P+NDAI  +T++ T+QF  D   
Sbjct: 66  FRLLRHLYGEDHVVYARNITDVDDKINARAARDFPDMPLNDAIRRVTTRTTEQFHTDIAA 125

Query: 114 LACLAPTHQPRATNHIP------QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
           L CL PT +PRAT+++        M+ +I+ +I  GHAYEA  E++FD +S+P+YGS S+
Sbjct: 126 LCCLPPTVEPRATDYVSGHANGHDMVAMIETLIEKGHAYEAGGEVLFDVTSMPDYGSLSK 185

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           R++DEQ+ G RV    HK+NP DF+LWK S   EPGW SPWGRGRPGWHIECS MS  +L
Sbjct: 186 RRLDEQQAGARVAVDSHKRNPGDFVLWKLSDENEPGWGSPWGRGRPGWHIECSVMSEAHL 245

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           GK FDIHGGGLDLIFPHHENEIAQS CA      A +W+HNG++ +EGRKMSKS GNFIT
Sbjct: 246 GKTFDIHGGGLDLIFPHHENEIAQSRCAHGTASMAEVWMHNGYVQVEGRKMSKSEGNFIT 305

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I++LL T+KFGGR WP  V+RLAMLMTHYREPIDF+V+RL EA   LS+  Q    + I+
Sbjct: 306 IHDLLHTEKFGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEAAEELSRLAQKFDYEEIL 365

Query: 348 D--------------PAVLSALYNDLN--------------------------------- 360
           +              P  + AL +DLN                                 
Sbjct: 366 NNWSLRKELELRDFVPGFVEALEDDLNISLALRYVREAVSNVRKSEFGKVTQIIASLEFL 425

Query: 361 --------------TVSAIQALHKLARESTKNHDLLPI----------FNASAHILGIEV 396
                         T+S   + H   RE  K  +L  I          F AS+  L  E 
Sbjct: 426 GIFRPEIIGVYSTGTLSIGMSPHSALREKNKLLNLRAIAANTSIRDAQFEASS--LSNEQ 483

Query: 397 CKEHLNKNISIAIEKLVQ------ERLILLKM-----KKFSSADYIRKQLESKGFILEDY 445
            K  +++   + +EK  Q      +RL+  ++     K ++ AD IR +L  KG  L+D 
Sbjct: 484 LKYFVSERGIVHVEKTEQISELEIQRLVEQRLAFIGDKNWAEADRIRDELAEKGIQLKDS 543

Query: 446 KNPDNGQRMTRWKQK 460
           K+P+ G+R+T W+ K
Sbjct: 544 KDPETGERLTTWELK 558


>gi|209885639|ref|YP_002289496.1| cysteinyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|226710846|sp|B6JHT8|SYC_OLICO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|209873835|gb|ACI93631.1| cysteinyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 464

 Score =  472 bits (1215), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/463 (50%), Positives = 301/463 (65%), Gaps = 31/463 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL +    F  +DP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG+ 
Sbjct: 3   LKLYDTLTKDKRAFVPLDPRNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYGDS 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI +RA +++P +P+N+AI  +T K   QF  D   L CL PT +PR
Sbjct: 63  HVTYVRNITDVDDKINDRALRDYPGLPLNEAIRKVTEKTATQFRADVDALGCLQPTVEPR 122

Query: 125 ATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           AT+ +         M+ LI+ +I  GHAYEAN E++FDT+S+P+YG  S RK++EQ+ G 
Sbjct: 123 ATDFVLPRPDGKTDMVSLIKTLIDRGHAYEANGEVLFDTASMPDYGQLSGRKLEEQQAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           R+    HKK+ ADF+LWK+S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG+ FDIHGGG
Sbjct: 183 RIAVDAHKKHAADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGETFDIHGGG 242

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL+    
Sbjct: 243 LDLIFPHHENEIAQSRCAHGTHAMANYWLHNGFLQVEGEKMSKSLGNFVTINELLQ---- 298

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--VLSAL 355
               WP  V+RL ML THYR PID+T++ L E+   L  W  T+       PA  V+  L
Sbjct: 299 ---DWPGEVVRLNMLKTHYRSPIDWTLKGLEESAKALDDWYATAGDAAGSAPADTVMETL 355

Query: 356 YNDLNTVSAIQALHKLARESTKN----HDLLPIFNASAHILGI--------EVCKEHLNK 403
            +DLNT   + ALH L  ++ K      D L    AS   LG         +  K   + 
Sbjct: 356 CDDLNTAQTVAALHGLRHQAEKGDAAQRDQLA---ASLRFLGFFSETKDAWDARKREASG 412

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             +  +  L+ +R      K +  +D IR +L + G  ++D K
Sbjct: 413 VDAAQVTALIADRTAARARKDWKESDRIRDELAAMGVAIKDSK 455


>gi|222148112|ref|YP_002549069.1| cysteinyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735100|gb|ACM36063.1| cysteinyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 588

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 221/393 (56%), Positives = 279/393 (70%), Gaps = 16/393 (4%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + +K+YNTL R   +F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVLYRLLR+ 
Sbjct: 43  MAEGLKLYNTLTRSKVDFTPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLYRLLRHI 102

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTY RNITD+DDKI  RA ++ P +P+N+AI+ +T K   QF  D   L  L PT
Sbjct: 103 YGENHVTYARNITDVDDKINARALRDFPDLPLNEAIAKVTQKTADQFHADVAALGNLPPT 162

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT++I QMI +I+ +I  GHAY A  E++FDT S+  YG  S+R +DEQ+ G R+ 
Sbjct: 163 IEPRATDNIQQMIDIIKTLIAKGHAYVAEGEVLFDTRSMAAYGQLSKRNLDEQQAGARIA 222

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            + HKK+P DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG+VFDIHGGGLDL
Sbjct: 223 VEAHKKHPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGEVFDIHGGGLDL 282

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQSCCA+     AN+W+HNGF+ +EGRKMSKS+GNF+TI++LL +  FGGR
Sbjct: 283 IFPHHENEIAQSCCANDTSVMANVWMHNGFVQVEGRKMSKSDGNFLTIDQLLRSDSFGGR 342

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
            W   V R AML THYR+PID+T+ +L ++   +  +  +  +  II             
Sbjct: 343 PWHGGVFRFAMLKTHYRQPIDWTLDKLQQSRNEIFSFIASCNAGLIISQINAKRSLGKAT 402

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKN 378
             D   + AL +DLNT  A+  L  L RE+ K+
Sbjct: 403 EQDADFIKALCDDLNTPLALSILFGL-RENAKS 434



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/57 (47%), Positives = 39/57 (68%)

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++S AI+ LV+ RL +LK K F+ AD IR  L +KG  L+D K+ D G+R+T W+ K
Sbjct: 531 DLSAAIDALVEMRLEMLKTKNFAEADKIRDDLLAKGIQLKDGKDKDTGERVTTWEVK 587


>gi|304392050|ref|ZP_07373992.1| cysteinyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296279|gb|EFL90637.1| cysteinyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 500

 Score =  470 bits (1210), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 240/497 (48%), Positives = 320/497 (64%), Gaps = 44/497 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YNTL R    F  IDP+N+RMYVCGPTVYD AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3   QLTLYNTLTRSKEPFTPIDPNNVRMYVCGPTVYDHAHIGNARPVIVFDVLFRLLRHIYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKII+RAR++ P + +N AI+ +T   T QF  D   L CL PT +P
Sbjct: 63  DAVKYVRNITDVDDKIIDRARRDFPDLDLNAAIAKVTESTTAQFQADMKALGCLEPTVEP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           +AT HI  M+ +I  +I  G+AY A+     E++FD +S  +YG  S RK+D+Q+ G RV
Sbjct: 123 KATEHIGGMVEMISTLIAKGNAYVASGAKGREVLFDVTSDDDYGVLSNRKLDDQQAGARV 182

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGKVF 231
             + HK+NP DF+LWK S   EPGW+  +          GRPGWHIECSAMS  +LG+ F
Sbjct: 183 AVESHKRNPGDFVLWKESAADEPGWDGGFTSSSGGETIHGRPGWHIECSAMSKAHLGETF 242

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDLIFPHHENEIAQSCCA+  ++ AN+W+HNG+L +EG+KMSKS+GNFIT+++L
Sbjct: 243 DIHGGGLDLIFPHHENEIAQSCCANSTDRMANVWMHNGYLQVEGKKMSKSDGNFITVHDL 302

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TST-SK 344
           L T+K GGR WP  V+RLA+LMTHYREP+DFTV+RL EA+ +L K  +      TST +K
Sbjct: 303 LHTEKVGGRKWPGEVVRLAILMTHYREPLDFTVRRLEEADDILIKLNRIFDSLMTSTFAK 362

Query: 345 GIIDPA--------------VLSALYNDLNTVSAIQAL--------HKLARESTKNHDLL 382
            I  P                + +L  DLN  + +  L        H L+ E  K  D L
Sbjct: 363 AISRPPERAGTNSAYRTANRTILSLVEDLNFKAVLDFLIRELRVSYHNLSEE--KQSDWL 420

Query: 383 PIFNASAHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                   +LGI+   +    ++  + I   V+ R   +  K +  AD IR +L ++G  
Sbjct: 421 DALARIFLMLGIKPAPQQTRNDVRDSQIAYAVRSRAEAIASKNWPVADRIRDELLAQGIQ 480

Query: 442 LEDYKNPDNGQRMTRWK 458
           L+D K+P+ G+R T W+
Sbjct: 481 LKDGKDPETGERTTTWE 497


>gi|146341598|ref|YP_001206646.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146194404|emb|CAL78429.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Bradyrhizobium
           sp. ORS278]
          Length = 469

 Score =  465 bits (1197), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 232/472 (49%), Positives = 303/472 (64%), Gaps = 26/472 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R+   F  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG +
Sbjct: 3   LRLYDTASREKRPFVPLDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRRIYGAE 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA +++P +P+N+AI  +T     QF  DT  L  L PT +PR
Sbjct: 63  HVTYVRNITDVDDKINARAARDYPGLPLNEAIRKVTEVTANQFHSDTAALGSLPPTFEPR 122

Query: 125 ATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           AT+ +         M+ LI+ +I  GHAYEA  E++FDT S+P+YG+ S RK+++Q  G 
Sbjct: 123 ATDFVLPRPDGKADMVTLIEQLIARGHAYEAGGEVLFDTRSMPDYGALSGRKLEDQLAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           RV    HKKNPADF+LWK+S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHGGG
Sbjct: 183 RVAVDAHKKNPADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHGGG 242

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDLIFPHHENEIAQS CA      AN W+HN F+ +EG KMSKS GNF+TI +LL     
Sbjct: 243 LDLIFPHHENEIAQSRCAHGTSVMANYWLHNEFVQVEGAKMSKSLGNFVTIRDLLA---- 298

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSAL 355
               WP  V+RL ML  HYR P D+TV+ L E+   L  W + +        +PA+++AL
Sbjct: 299 ---DWPGEVLRLNMLKMHYRSPADWTVKGLEESAKTLDDWYRVAADAPGEQPEPAIINAL 355

Query: 356 YNDLNTVSAIQALHKL-ARESTKNHDLLPIFNASAHILGI--------EVCKEHLNKNIS 406
            +D+NT   I  LH L AR ++ +      F  S    G         E  K+      +
Sbjct: 356 LDDINTPLMIAELHALRARAASGSEVDRAAFAGSLRYFGFLSETATLWEARKQQAKGVDA 415

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +E L+ ER      K F  +D +R +L + G +L+D K  D G+ +T W+
Sbjct: 416 AEVEGLIAERTAARARKDFKESDRLRDELAAMGVVLKDGKGAD-GKPVTTWE 466


>gi|323138201|ref|ZP_08073273.1| cysteinyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396453|gb|EFX98982.1| cysteinyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 455

 Score =  459 bits (1181), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/454 (50%), Positives = 300/454 (66%), Gaps = 15/454 (3%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + ++IYNTL R+  EF+ +D SN+RMYVCGPTVYD+AHIGNARP+IVFDVLYRLLR++
Sbjct: 1   MSQTLRIYNTLAREKQEFRPLDASNVRMYVCGPTVYDYAHIGNARPLIVFDVLYRLLRHH 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTYVRNITD+DDKI  RA +   SI        +T +  + F +D   L CL PT
Sbjct: 61  YGADHVTYVRNITDVDDKINARAAERGISI------RELTEETNRVFQEDVRALGCLEPT 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            QPRAT HI +MI +I+ +I   HAY A+  ++FD  S+ +YG  SRR +DE   G RV 
Sbjct: 115 VQPRATEHIAEMISIIERLIASRHAYAADGHVLFDVPSMKDYGRLSRRSLDEMLAGARVD 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K+   DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGG+DL
Sbjct: 175 VAPYKRGDMDFVLWKPSKENEPGWDSPWGRGRPGWHIECSAMSWKHLGETFDIHGGGIDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA   +  AN W+HNGFL +EG KMSKS GNF+TI+ELL T+KFGGR
Sbjct: 235 VFPHHENEIAQSRCAFDHDVMANYWMHNGFLQVEGEKMSKSLGNFVTIHELLHTEKFGGR 294

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIIDPAVLSA 354
            WP  V+RLAML THYR+PID+TV+ L EAE  L +W       +T+          + A
Sbjct: 295 KWPGEVLRLAMLRTHYRQPIDWTVKALEEAETSLRRWAEFIEAGETTGDSSDFFGQFVGA 354

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVCKEHLNKNISIAIEKLV 413
           L +DLNT  A+  LH +      +  L+ +  +A +++  IE  +E      + AI  L+
Sbjct: 355 LKDDLNTPLAMSFLHSVFDPRLLDDALMLVGIDARSYVQWIE--RETRRGVDAAAIGALI 412

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             RL     K ++ +D IR +L + G  L+D K+
Sbjct: 413 NARLAARAAKNWAESDRIRDELAAMGIALKDNKD 446


>gi|192290599|ref|YP_001991204.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|229558783|sp|B3QCS4|SYC_RHOPT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|192284348|gb|ACF00729.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 491

 Score =  454 bits (1167), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 234/488 (47%), Positives = 310/488 (63%), Gaps = 34/488 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL R    F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 2   ELRLYDTLTRDKRPFTPIDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +P
Sbjct: 62  AHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------IPNYGSFSRRKIDEQKMG 176
           RAT HI +M  +I+ ++  G AY   + ++F  S+       +P YGS + R +DE   G
Sbjct: 122 RATEHIGEMRSIIEKLVAGGFAYVEQDHVLFSPSAMNAANGVLPRYGSLANRSLDEMIAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDI 233
            RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FDI
Sbjct: 182 ARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFDI 241

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL+FPHHENE+AQSCCA   ++ A  W+HNGFL +EG KMSKS GNFITI ELL 
Sbjct: 242 HGGGIDLVFPHHENEVAQSCCAFHTKRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELLA 301

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDP 349
           T KFGGRSW    +RLAML THYR+PID+TV  L EA+  ++K+ +T       K +  P
Sbjct: 302 TNKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALEEAQKRVAKYRRTLERFRGGKNVEVP 361

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------FNASAHILG 393
             V+SAL +DLNT +AI  L  L R +       P                  AS  +LG
Sbjct: 362 HGVVSALSDDLNTHAAITELDALNRRANGVTHEGPTSEADALAANAIAADELRASLRLLG 421

Query: 394 IEVCKEH---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           I V  E    +N+     I++L+  R      K +  +D IR +L + G +L+D K+ D 
Sbjct: 422 ISVASERSGAVNQIFDQNIQRLIAVRTAARANKDWKESDRIRDELAAMGVVLKDGKDAD- 480

Query: 451 GQRMTRWK 458
           G+ +T W+
Sbjct: 481 GKPVTTWE 488


>gi|39935066|ref|NP_947342.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|61216212|sp|Q6N8A7|SYC_RHOPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39648917|emb|CAE27438.1| cysteine-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 463

 Score =  452 bits (1164), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/467 (48%), Positives = 301/467 (64%), Gaps = 20/467 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL R    F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 2   ELRLYDTLTRDKRPFTPIDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +P
Sbjct: 62  AHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------IPNYGSFSRRKIDEQKMG 176
           RAT HI +M  +I+ ++  G AY   + ++F  S+       +P YGS + R +DE   G
Sbjct: 122 RATEHIGEMRSIIEKLVAGGFAYVEQDHVLFSPSAMNAANGVLPRYGSLANRSLDEMIAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDI 233
            RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FDI
Sbjct: 182 ARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFDI 241

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL+FPHHENE+AQSCCA   E+ A  W+HNGFL +EG KMSKS GNFITI ELL 
Sbjct: 242 HGGGIDLVFPHHENEVAQSCCAFHTERMAQTWMHNGFLQVEGEKMSKSLGNFITIRELLA 301

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-PAVL 352
           T KFGGRSW    +RLAML THYR+PID+TV  L EAE  +  W   +     +    V+
Sbjct: 302 TNKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALHEAEKAILDWSDFAKDATPVRCDEVI 361

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-VCKEHLNKNISIAIEK 411
           +AL +DLNT   I  LH L R    +         +  +LGI  V +  +  ++    + 
Sbjct: 362 AALTDDLNTPKMIAELHALRRAGKADE-----LRGAMQLLGINPVVRAPV--DLDATAKS 414

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           L++ R      K +  +D IR +L + G +L+D K+ D G+ +T W+
Sbjct: 415 LIEARTAARANKDWKESDRIRDELAAMGVVLKDGKDAD-GKSVTTWE 460


>gi|115524011|ref|YP_780922.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122296629|sp|Q07Q42|SYC_RHOP5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115517958|gb|ABJ05942.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 463

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 230/467 (49%), Positives = 305/467 (65%), Gaps = 20/467 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL R+   F  +DPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 2   ELRLYDTLSREKRTFTPLDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI +RA ++ P +P+N+AI  +T +  +QF  D   L CL PT +P
Sbjct: 62  AHVKYVRNITDVDDKINDRAARDFPGLPLNEAIRKVTEQTEKQFHDDVDALGCLRPTVEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------IPNYGSFSRRKIDEQKMG 176
           RAT HI +M  +I  +I  G AY A + ++F   +       +P YG+ + R +DE   G
Sbjct: 122 RATEHIGEMRDIIDRLIAGGFAYVAADHVLFSPQAMNAKDGVLPRYGALANRSLDEMIAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDI 233
            RV    +K++  DF+LWK S P EP W SP G   +GRPGWHIECSAMS  +LG+ FDI
Sbjct: 182 ARVDVAPYKRDATDFVLWKPSKPGEPSWPSPGGIAVQGRPGWHIECSAMSWKHLGERFDI 241

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL+FPHHENE+AQSCCA   E+ A  W+HNGFL +EG KMSKS GNF+TI ELL 
Sbjct: 242 HGGGIDLVFPHHENEVAQSCCAFHTERMAETWMHNGFLQVEGEKMSKSLGNFVTIRELLA 301

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVL 352
           T KFGG+ W   V+RLAML THYR PID+TV+ L EAE  +  W + T  +       V+
Sbjct: 302 TDKFGGKRWDGAVLRLAMLKTHYRSPIDWTVEALHEAEKAIYDWSEFTKDATPAPCDEVI 361

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIEK 411
            AL +DLNT   I  LH L R   K  +LL     +  +LGI  V ++ +   I +  + 
Sbjct: 362 DALADDLNTPKMIAELHGL-RRVGKPAELL----GALQLLGIGRVFRQTI--EIDVNAQA 414

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           L++ R      K F  +D IR +L + G +L+D K+ D G+ +T W+
Sbjct: 415 LIEARTAARARKDFKESDRIRDELAAMGVVLKDGKDAD-GKPVTTWE 460


>gi|300023350|ref|YP_003755961.1| cysteinyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525171|gb|ADJ23640.1| cysteinyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 469

 Score =  452 bits (1162), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/470 (48%), Positives = 300/470 (63%), Gaps = 22/470 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  IDPSN+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG +
Sbjct: 3   LKLYNTLTRQKAEFAPIDPSNVRMYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGPE 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA ++ P +P+NDAI  +T    +QF +D   L  L PT +PR
Sbjct: 63  HVTYVRNITDVDDKINARAARDFPDLPLNDAIRKVTEATEKQFHEDIAALGVLPPTFEPR 122

Query: 125 ATNHIPQ------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           AT +I +      M+ LI+ ++  G+AY A + ++FD +S+P+YG  S R +DE + G R
Sbjct: 123 ATEYIRRDDGRETMVSLIEALVQRGNAYVAEDHVLFDVASMPDYGRLSNRSLDEMEAGAR 182

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHG 235
           V    +KK P DF+LWK S P EP W SP G    GRPGWHIECSAM+   LG  FDIHG
Sbjct: 183 VEVAPYKKGPMDFVLWKPSKPGEPAWPSPCGIATPGRPGWHIECSAMAGALLGPEFDIHG 242

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHENEIAQS CA      AN+W+HNGFL +EG KMSKS GNF+TINELL   
Sbjct: 243 GGIDLTFPHHENEIAQSRCAHGTPFMANVWMHNGFLQVEGEKMSKSLGNFVTINELLSD- 301

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIIDPAV 351
                 WP  V+R  ML THYR+PID+T + L E++ +LS W      ++  +  + PA 
Sbjct: 302 -----GWPGEVLRFNMLRTHYRQPIDWTKKGLEESQKILSGWFSQNGLSTDDRTELSPAF 356

Query: 352 LSALYNDLNTVSAIQALHKL--ARESTKNHDLLPIFNASAHIL-GIEVCKEHLNKNISIA 408
           L AL +DLNT  AI  LH    A+++T+    L         L   +       ++++  
Sbjct: 357 LDALADDLNTPKAIAELHGFATAKDATRLGAALSFLGFDGATLKKADARAAETAQSVASK 416

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +E L+  RL   K K F+ +D IR +L   G  L+D KN + G+  T W+
Sbjct: 417 VEPLIIARLDARKRKDFAESDRIRDELAKMGISLKDAKNKETGEIETTWE 466


>gi|316934832|ref|YP_004109814.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315602546|gb|ADU45081.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 463

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/467 (48%), Positives = 307/467 (65%), Gaps = 20/467 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL ++   F  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 2   ELRLYDTLTKEKRTFAPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +P
Sbjct: 62  GHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------IPNYGSFSRRKIDEQKMG 176
           RAT HI +M  +I  ++  G AY   + ++F   +       +P YGS + R +DE   G
Sbjct: 122 RATEHIGEMRSIIDKLVAGGFAYVEQDHVLFSPGAMNAANGVLPRYGSLANRSLDEMIAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDI 233
            RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FDI
Sbjct: 182 ARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFDI 241

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL+FPHHENE+AQSCCA    + A  W+HNGFL +EG KMSKS GNFITI ELL 
Sbjct: 242 HGGGIDLVFPHHENEVAQSCCAFHTSRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELLA 301

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVL 352
           T+KFGGRSW    +RLAML THYR+PID+TV  L EAE  +  W + T  +       V+
Sbjct: 302 TEKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALHEAEKAILDWSEFTKDATPARCDEVI 361

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIEK 411
           +AL +DLNT   I  LH L R + +  +LL     +  +LGI  V ++ +  +I +    
Sbjct: 362 AALTDDLNTPKMIAELHAL-RRAGRAQELL----GALQLLGIGRVFRQSI--DIGVNARA 414

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           L++ R      K +  +D IR +L + G +L+D K+ +NG+ +T W+
Sbjct: 415 LIEARTAARANKDWKESDRIRDELAAMGVVLKDGKD-ENGKPVTTWE 460


>gi|254473467|ref|ZP_05086864.1| cysteinyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957583|gb|EEA92786.1| cysteinyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 483

 Score =  449 bits (1154), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/462 (49%), Positives = 289/462 (62%), Gaps = 28/462 (6%)

Query: 18  FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           F  +D SN+RMYVCGPTVYD+AHIGNARP++VFDVL RLLR  YG+  VTYVRNITD+DD
Sbjct: 25  FVPMDASNVRMYVCGPTVYDYAHIGNARPVVVFDVLARLLRQLYGKDHVTYVRNITDVDD 84

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KI ERA +E  SI        +T K   Q+  D   L   AP  +PRAT HI +M  +I+
Sbjct: 85  KINERAAREGISI------RELTEKTAGQYHADMEALGAQAPDIEPRATEHIEEMKVMIE 138

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            ++  GHAY A+  ++F   S+P YG  S R +DE   G RV    +KK+P DF+LWK S
Sbjct: 139 TLVDKGHAYVADEHVLFHVPSMPEYGKLSNRTLDEMVAGARVEVASYKKDPTDFVLWKPS 198

Query: 198 TPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
              EPGWESP G    GRPGWHIECSAMS  +LGKVFDIHGGG+DL FPHHENEIAQS C
Sbjct: 199 KADEPGWESPCGIETPGRPGWHIECSAMSEKHLGKVFDIHGGGVDLTFPHHENEIAQSRC 258

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A      AN+W+HNGFL +EG KMSKS GNF T+++LL+T++ GGR W    IR A+L T
Sbjct: 259 AHDTHAMANVWLHNGFLQVEGEKMSKSLGNFFTVHQLLDTEEGGGRKWSGQAIRYALLQT 318

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQ-------TSTSKGIIDPAVLSALYNDLNTVSAIQA 367
            YR+PIDFT + L E E  L++W         T+   G  D AVL  L +DLNT  A  A
Sbjct: 319 QYRQPIDFTFKSLAEGEKQLTRWADLLKKHDVTAQENGTPDEAVLEGLKDDLNTPRAFAA 378

Query: 368 LHKLARES-TKNHDLLPIFNASAHILGI-----------EVCKEHLNKNISIAIEKLVQE 415
           LHKLAR++   + D       S   LG            E  +  ++  +   +E+L+ +
Sbjct: 379 LHKLARDARGGDADAAQKLANSIKFLGFDLESFSKAQSEEKAEADVSPELKAKVEELIAK 438

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           RL   K+K F+ +D IR +L + G +L+D KN + G+  T W
Sbjct: 439 RLEARKVKDFAESDRIRDELAADGIVLKDMKNKETGEIETTW 480


>gi|296447282|ref|ZP_06889211.1| cysteinyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296255244|gb|EFH02342.1| cysteinyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 485

 Score =  447 bits (1149), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 231/475 (48%), Positives = 295/475 (62%), Gaps = 38/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF+ IDP+N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR  YG +
Sbjct: 8   LKLYNTLTRVKEEFRPIDPANVRMYVCGPTVYDYAHIGNARPLIVFDVLFRLLRQLYGAE 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA +   SI        +T      F  D   L CL P+ QPR
Sbjct: 68  HVTYVRNITDVDDKINARAAERGISI------RELTEGTNAIFQADVAALGCLPPSVQPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI L++ +I  GHAY A+  ++FD  S+ +YG  SRR +DE   G RV    +
Sbjct: 122 ATEHIAQMIALVEKLIASGHAYAADGHVLFDVPSMADYGRLSRRPLDEMIAGARVDVAPY 181

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+   DF+LWK S   EPGW+SPWGRGRPGWH+ECSAMS  +LG+ FDIHGGG+DL+FPH
Sbjct: 182 KRGDMDFVLWKPSKDSEPGWDSPWGRGRPGWHLECSAMSWKHLGETFDIHGGGIDLVFPH 241

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA   E  AN W+HNGFL +EG KMSKS GNF+TI+ELL T+ FGGR WP 
Sbjct: 242 HENEIAQTRCAFGHEVMANYWMHNGFLQVEGEKMSKSLGNFVTIHELLHTENFGGRKWPG 301

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLSA 354
            V+RLAML THYR+PIDFTV+ L EAE  L +W              +  G +  A +  
Sbjct: 302 EVLRLAMLRTHYRQPIDFTVKALEEAERTLLRWRRFVELALSLDDDISDFGPLPSAFMEY 361

Query: 355 LYNDLNTVSAIQALHKLAR-----------ESTKNHDL-----------LPIFNASAHIL 392
           L +DLNT +A+  +H+LAR           EST    +                    IL
Sbjct: 362 LADDLNTPAALSRIHELARVGPTAALEWGEESTAASPVEQQIAAARLRAALSLLGLQTIL 421

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                +  +++  S  I++L++ R      K ++ +D IR  L + G  L+D K+
Sbjct: 422 DPAWQRSSVDEAESDKIKELIERRRTARATKNWAESDRIRDALAAMGVALKDNKD 476


>gi|91976542|ref|YP_569201.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123721921|sp|Q139D9|SYC_RHOPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91682998|gb|ABE39300.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 463

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/466 (47%), Positives = 297/466 (63%), Gaps = 20/466 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL ++  +F  +DPS +RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE 
Sbjct: 3   LRLYDTLTKEKRDFAPLDPSRVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGEN 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI +RA +++P +P+N++I  +T +  +QF  D   L CL PT +PR
Sbjct: 63  HVKYVRNITDVDDKINDRAARDYPGLPLNESIRKVTEQTERQFHDDVDALGCLRPTVEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFD-------TSSIPNYGSFSRRKIDEQKMGT 177
           AT HI +M  +I  ++  G AY A++ ++F         S +P YG+ + R +DE   G 
Sbjct: 123 ATEHIGEMRTIIDRLVEGGFAYVADDHVLFSPGAMNAADSVLPRYGALANRSLDEMIAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIH 234
           RV    +K++  DF+LWK S P EP W SP G   +GRPGWHIECSAMS  +LG+ FDIH
Sbjct: 183 RVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATQGRPGWHIECSAMSWKHLGETFDIH 242

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL+FPHHENE+AQSCCA    + A  W+HNGFL +EG KMSKS GNF+TI ELL T
Sbjct: 243 GGGIDLVFPHHENEVAQSCCAFHTSRMAQTWMHNGFLQVEGEKMSKSLGNFVTIRELLAT 302

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--TSKGIIDPAVL 352
           +KFGGR W    +RLAML THYR+PID+T   L EAE  +  W   +   + G  D  V+
Sbjct: 303 EKFGGRKWDGATLRLAMLKTHYRQPIDWTADALHEAEKAIFDWSDFTKDATPGSCDD-VI 361

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
           +AL +DLNT   I  LH L R    +         +  +LGI         ++    + L
Sbjct: 362 AALTDDLNTPKMIAELHALRRAGKADE-----LCGAMELLGISPVVRG-TVDLDATAKSL 415

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +  R      K F  +D IR +L + G  ++D K+ D G+ +T W+
Sbjct: 416 IDARTAARARKDFKESDRIRDELAAMGIAIKDGKDSD-GKPVTTWE 460


>gi|86750485|ref|YP_486981.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|109894930|sp|Q2IUP0|SYC_RHOP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86573513|gb|ABD08070.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 493

 Score =  443 bits (1140), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/496 (46%), Positives = 307/496 (61%), Gaps = 50/496 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL ++   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE 
Sbjct: 3   LRLYDTLTKEKRAFAPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGEN 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +PR
Sbjct: 63  HVTYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFD-------TSSIPNYGSFSRRKIDEQKMGT 177
           AT HI +M  +I  ++  G AY A + ++F         S +P YG+ + R +DE   G 
Sbjct: 123 ATEHIGEMRTIIDRLVAGGFAYVAADHVLFSPAAMNAANSVLPRYGALANRSLDEMIAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIH 234
           RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FDIH
Sbjct: 183 RVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGITMEGRPGWHIECSAMSWKHLGETFDIH 242

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL+FPHHENE+AQSCCA + ++ A  W+HNGFL +EG KMSKS GNFITI ELL T
Sbjct: 243 GGGIDLVFPHHENEVAQSCCAFQTDRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELLAT 302

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
           +KFGG SW   ++R AM+ THYR PID+TV+ L E   +L  W +     G + PA    
Sbjct: 303 EKFGGDSWVGEILRFAMIKTHYRSPIDWTVKALDEGHKVLWDWYR---DIGDVGPAQQLP 359

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN---------------------- 386
              +  L +DLN  SAI  +H L R+  K  +LL   N                      
Sbjct: 360 GEFIDCLADDLNISSAIAFMHSL-RKDKKFAELLATMNFLGFSNAESVLARRPVGVRINL 418

Query: 387 ----ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               A A +  +EV  + L+K+    IE+ +  R      K F  +D IR +L + G  +
Sbjct: 419 PPAHAEAAVGTVEVLAKPLSKS---EIEERIDARTAARARKDFKESDRIRDELAAMGIAI 475

Query: 443 EDYKNPDNGQRMTRWK 458
           +D K+ D G+ +T W+
Sbjct: 476 KDGKDAD-GKPVTTWE 490


>gi|240850206|ref|YP_002971599.1| cysteinyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267329|gb|ACS50917.1| cysteinyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 502

 Score =  439 bits (1130), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/504 (46%), Positives = 318/504 (63%), Gaps = 51/504 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K+++ YNTL RK   F  IDP+ +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ YG
Sbjct: 2   KELRFYNTLTRKKENFTPIDPTRVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITD+DDKI  RA  E+P++ +NDAI  +T +   QF +DT  L CL PT Q
Sbjct: 62  NEHVLYARNITDVDDKINARAVFEYPNLSLNDAIRQLTERTYCQFQQDTIALGCLLPTSQ 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRV 179
           PRAT H+ +M  LI+ ++  GHAY+A N I+F  SSI   P+YG+F+ R +DE + G R+
Sbjct: 122 PRATEHLEEMRSLIERLLEKGHAYKAENHILFSVSSIKNPPHYGAFANRSLDEMRAGARI 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL--------- 227
               +K+   DF+LWK S   EPGWESP G    GRPGWHIECSAMS   L         
Sbjct: 182 DVAAYKREEMDFVLWKPSVEGEPGWESPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGLT 241

Query: 228 -----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                  VFDIHGGGLDLIFPHHENEIAQSC A   E+ AN W+HNGFL +EG+KMSKS 
Sbjct: 242 CDDPTANVFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSKSF 301

Query: 283 GNFITINELLETK--KFGG-------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           GNFITI  +LE    +F G       ++W     R +ML THYREP+++T QRL ++   
Sbjct: 302 GNFITIRSVLENNFLEFNGILIDEMKKNWAGLSARFSMLQTHYREPLNWTAQRLIQSSGE 361

Query: 334 LSKWPQTSTSKG-------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
           L +W +   SK         I+  ++ AL +DLNT  A+  L K  +E     + L + N
Sbjct: 362 LYRWYELLRSKKSEMENNEAINDTLIDALSDDLNTPKALTLLRKFYKEG----NALALSN 417

Query: 387 ASAHILGI-------EV-CKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              ++LG+       E+ C   + K    S  I++ + ERL L+  K++ +AD IR +L 
Sbjct: 418 G-MNLLGLLRQEWIKEIDCPLFIKKTFLDSKFIDQRIAERLRLIHNKEWEAADTIRDELA 476

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
           ++G +L+D K+P +G+R+T W+ K
Sbjct: 477 AEGVLLKDSKDPQSGERITVWEIK 500


>gi|163868002|ref|YP_001609206.1| cysteinyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|187629795|sp|A9IRQ9|SYC_BART1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|161017653|emb|CAK01211.1| Cysteinyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 503

 Score =  437 bits (1125), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 236/506 (46%), Positives = 316/506 (62%), Gaps = 51/506 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K+++ YNTL RK   F  IDP+ +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MMKELRFYNTLTRKKENFIPIDPTKVRLYVCGPTVYDYAHIGNARPLIVFDILFRLLRHV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   V Y RNITD+DDKI  RA  E+P++P+N+AI  +T +   QF +DT  L CL PT
Sbjct: 61  YGSDHVLYARNITDVDDKINARAACEYPNLPLNEAIRQLTERTYFQFQQDTIALGCLLPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGT 177
            QPRAT H+ +M  LI+ ++  GHAY+A N I+F  SSI   P+YG+F+ R +DE + G 
Sbjct: 121 SQPRATEHLEEMRALIERLLEKGHAYKAENHILFSISSIKNPPHYGAFANRSLDEMRAGA 180

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           R+    +K+   DF+LWK S   EPGW+SP G    GRPGWHIECSAMS   L       
Sbjct: 181 RIDVAAYKREEMDFVLWKPSAEGEPGWKSPGGIPVLGRPGWHIECSAMSMAKLLAPYGGG 240

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                    +FDIHGGGLDLIFPHHENEIAQSC A   E+ AN W+HNGFL +EG+KMSK
Sbjct: 241 LTCDDPIANIFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSK 300

Query: 281 SNGNFITINELLETK--KFGG-------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI  +LE    +F G       ++W     R +ML THYREP+++T QRL ++ 
Sbjct: 301 SFGNFITIRSVLENNFLEFNGALAYEIKQNWAGLSARFSMLQTHYREPLNWTAQRLMQSS 360

Query: 332 ILLSKWPQTSTSKG-------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W +    K         I+  ++ AL +DLNT  A   L K      K  D L +
Sbjct: 361 SELYRWYELLRDKKSMMENNEAIEDTLIDALSDDLNTPKAFTLLRKF----YKAGDALAL 416

Query: 385 FNASAHILGI-------EV-CKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQ 434
            N   ++LG+       E+ C   + K    S  IE+ + ERL L+  K++ +AD IR +
Sbjct: 417 ANG-MNLLGLLRQEWIKEIDCPLFIKKTSLDSKFIEQCIAERLRLIHNKEWGAADKIRNE 475

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L ++G +L+D K+P +G+R+T W+ K
Sbjct: 476 LAAEGILLKDGKDPQSGKRITVWEIK 501


>gi|49474075|ref|YP_032117.1| cysteinyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|61216196|sp|Q6G073|SYC_BARQU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49239579|emb|CAF25936.1| Cysteinyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 502

 Score =  437 bits (1124), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/499 (46%), Positives = 309/499 (61%), Gaps = 41/499 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++ YNTL RK   F  ID + +R+YVCGPT+YD+AHIGNAR +IVFDVL+RLLRY YG
Sbjct: 2   RKLRFYNTLTRKKENFTPIDATKVRLYVCGPTIYDYAHIGNARSVIVFDVLFRLLRYVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V YVRNITD+DDKI  RA  EHP + +NDAI  +T +   QF +DT  L CL PT Q
Sbjct: 62  NEHVIYVRNITDVDDKINARAACEHPELALNDAIRQLTERTYSQFQQDTMALGCLLPTSQ 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRV 179
           PRAT+H+  M  LI+ ++  GHAY+  N ++F   SI   P+YG+F++R +DE + G RV
Sbjct: 122 PRATDHLEDMRSLIERLLEKGHAYKVQNHVLFSVRSIRNHPHYGAFAKRSLDEMRAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL--------- 227
               +K+   DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L         
Sbjct: 182 DVAAYKREEMDFVLWKPSAVGEPGWASPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGLT 241

Query: 228 -----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                  VFDIHGGG+DLIFPHHENEIAQSC A   E+ AN+W+HNGFL +EG+KMSKS 
Sbjct: 242 CDDPTANVFDIHGGGIDLIFPHHENEIAQSCSAFGTERMANLWMHNGFLQVEGKKMSKSL 301

Query: 283 GNFITINELLETK--KFGG-------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           GNFITI  +LE+   +F G       ++W     R +ML THYREP+++T QRL ++   
Sbjct: 302 GNFITIRSILESDFFEFNGVLTDEMKQNWAGLSARFSMLQTHYREPLNWTAQRLVQSSSE 361

Query: 334 LSKW-------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL--ARESTKNHDLLPI 384
           L +W        +       +D +V+ AL +DLNT  A+  L K   A  +    + + +
Sbjct: 362 LYRWYELLCFEREEMEKNEALDDSVIDALSDDLNTPKALTLLRKFYKAGNAIALANGMNL 421

Query: 385 FNASAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           F         EV      + IS+    I++ + ERL L+  K++++AD IR +L +KG I
Sbjct: 422 FGLLRQEWVQEVECPLFMRKISLNSKFIDQRIAERLRLIHNKEWAAADTIRDELAAKGVI 481

Query: 442 LEDYKNPDNGQRMTRWKQK 460
           L+D K+P  G+R T W+ +
Sbjct: 482 LKDGKDPQTGERTTMWEMR 500


>gi|217976332|ref|YP_002360479.1| cysteinyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254781685|sp|B8EMY2|SYC_METSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217501708|gb|ACK49117.1| cysteinyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 449

 Score =  436 bits (1120), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 222/460 (48%), Positives = 293/460 (63%), Gaps = 16/460 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL R+   F  IDP+++R+Y CGPTVYD  HIGN R +IVFD+L+RLLR+ YG+ 
Sbjct: 3   LRFYNTLTRQKEAFTPIDPADVRVYACGPTVYDHLHIGNGRMLIVFDLLFRLLRHVYGKD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI  RA +    I       ++T + T  F +D   L CL PT +PR
Sbjct: 63  HVRYVRNITDVDDKINARAAERGVDI------RVLTDEMTAIFHEDAAGLGCLPPTVEPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ +MI +IQ +I  G AY A   ++FD  ++P+YG+ S+R +D+   G RV    +
Sbjct: 117 ATEHMAEMIAIIQKLIDKGAAYIAEGHVLFDVPAMPDYGALSKRPLDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF+LWK + P EPGWESPWGRGRPGWHIECSAMS  +LG+VFDIHGGG+DL+FPH
Sbjct: 177 KRGPMDFVLWKPAAPSEPGWESPWGRGRPGWHIECSAMSWRHLGEVFDIHGGGIDLVFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA      A++W+HNG L +EG KMSKS GNF+TI+ELL +  FGGR WP 
Sbjct: 237 HENEIAQTRCAFGHSVMAHVWMHNGHLQVEGEKMSKSLGNFVTIHELLNSDSFGGRKWPG 296

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYNDLNTV 362
            V+RLAML THYR+PIDFTV+ L EAE  LS+W   +        D   + AL +DLNT 
Sbjct: 297 AVLRLAMLRTHYRQPIDFTVKALEEAERTLSEWRHAAEGAEPEAPDANFIDALSDDLNTP 356

Query: 363 SAIQALHKL-ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
            AI  LH L A+        L +       LG E  +  L ++    I  L+ ER    +
Sbjct: 357 RAISELHALKAKRPGALLGGLALLGVDLADLGEE--ERALPRSAFEQIMALIAEREAARQ 414

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
            K ++ +D +R +L + G +L+D K        T W+ KP
Sbjct: 415 HKNWAESDRLRDKLAAMGVVLKDNKG-----GATSWELKP 449


>gi|319404030|emb|CBI77618.1| Cysteinyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 502

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/501 (45%), Positives = 310/501 (61%), Gaps = 47/501 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++ YNTL R+  +F  ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3   ELRFYNTLTRRKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHIYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI  +A  ++P + +NDAI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYVRNITDVDDKINAKAALQYPDLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++ +LI+ ++  GHAY A+N I+F  SS+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRFLIERLLEKGHAYIADNHILFSVSSMGDNPRYGMFAKRSLDEMRAGARID 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS-----SHYLG---- 228
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS     S Y G    
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGISVLGRPGWHIECSAMSMAKLLSPYGGGFVC 242

Query: 229 -----KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG+DLIFPHHENEIAQSC     E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NFITI  LLE   F           + W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFITIRSLLEDDFFEFADILSAEVKQIWAGLSIRFSMLQTHYREPLNWTMQRLIQSSSEL 362

Query: 335 SKWPQTSTSKG-------IIDPAVLSALYNDLNTVSAIQALHKLARES-----TKNHDLL 382
            +W +   S+         +D +++  L NDLNT + I  L K  +E      T   D L
Sbjct: 363 YRWYELLRSEKYCLEDNQTVDSSLIKTLSNDLNTSNTITILRKFYKEHNVIALTHGMDFL 422

Query: 383 PIFN---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            +            + + K HLN      I++ + ERL L+  K++++AD IR +L  +G
Sbjct: 423 GLLRQELVKEKECPLFIGKTHLNLQF---IDQRIAERLALIHNKEWAAADKIRDELAVEG 479

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
             L+D K+P  G+R+T W+ K
Sbjct: 480 IFLKDSKDPQTGERITTWEMK 500


>gi|319407042|emb|CBI80679.1| Cysteinyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 502

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/506 (45%), Positives = 315/506 (62%), Gaps = 57/506 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++ YNTL R+  +F  ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3   ELRFYNTLTRRKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI  +A  ++P + +NDAI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYVRNITDVDDKINAKAALQYPDLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++ +LI+ ++  GHAY A+N I+F   S+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRFLIERLLEKGHAYIADNHILFSVGSMGDNPRYGMFAKRSLDEMRAGARID 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS-----SHYLG---- 228
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS     S Y G    
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWISPAGISVLGRPGWHIECSAMSMAKLLSPYGGGFIC 242

Query: 229 -----KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG+DLIFPHHENEIAQSC     E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NFITI  LLE   F           R W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFITIRSLLENDFFEFADILSAEVKRIWAGLSIRFSMLQTHYREPLNWTMQRLVQSSSEL 362

Query: 335 SKWPQTSTSK-------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
            +W +   S+         +D +++  L NDLNT + I  L K  +E    H+++ + + 
Sbjct: 363 YRWYELLRSERCCLDDNQTVDSSLIKTLSNDLNTSNTITILRKFYKE----HNIIALAHG 418

Query: 388 SAHILGI---EVCKE----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
               LG+   E+ KE          HLN      I++ + ERL L+  K++ +AD IR +
Sbjct: 419 -MDFLGLLRQELVKEKECPLFVGKTHLNLQF---IDQRIAERLALIHNKEWEAADKIRGE 474

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L ++G  L+D K+P  G+R+T W+ K
Sbjct: 475 LAAEGIFLKDSKDPQTGERITTWEMK 500


>gi|121602424|ref|YP_988796.1| cysteinyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|187629794|sp|A1US43|SYC_BARBK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120614601|gb|ABM45202.1| cysteinyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 500

 Score =  432 bits (1112), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 229/507 (45%), Positives = 317/507 (62%), Gaps = 61/507 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL RK  +F  ID S +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ YG+ 
Sbjct: 4   LRFYNTLTRKKEDFIPIDSSKVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVYGKD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI  RA +E+P + +NDAI  +T +   QF +DT  L CL PT+QPR
Sbjct: 64  HVIYARNVTDVDDKINARAIREYPKLTLNDAIHQLTERTYDQFQQDTEALGCLLPTYQPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKMGTRVPE 181
           AT+H+ +M  LI+ ++  GHAY A N ++F  +SI N   YG F++R ++E K G RV  
Sbjct: 124 ATDHLEEMRSLIERLLEKGHAYIAENHVLFSVNSIKNNPLYGVFAKRSLNEMKAGARVDV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS-----SHYLG----- 228
             +K++  DF+LWK ST  EPGW+SP G    GRPGWHIECSAMS     + Y G     
Sbjct: 184 APYKRDDMDFVLWKPSTQQEPGWKSPAGISVLGRPGWHIECSAMSMAKLLTPYGGGLACD 243

Query: 229 ----KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
                VFDIHGGG+DLIFPHHENEIAQSC     E+ AN W+HNGFL +EGRKMSKS GN
Sbjct: 244 DLSVNVFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGRKMSKSFGN 303

Query: 285 FITINELLETK--KFGG-------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           FITI  +LE+   +F         +SW     R +ML THYREP+++T QRL ++   L 
Sbjct: 304 FITIRSILESNFVEFSNAMTDDLKQSWAGLSARFSMLQTHYREPLNWTAQRLAQSSSELY 363

Query: 336 KWPQ-------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +W +          + G+ID +++S L +DLNT ++   L K  +E           NA 
Sbjct: 364 RWYELLRCERSCLDNGGVIDASLISTLSDDLNTPNSFTLLRKFYKEE----------NAV 413

Query: 389 AHILGIE---VCKEHLNKNI------------SIAIEKLVQERLILLKMKKFSSADYIRK 433
           A + G++   + ++   + I            S  I++ + ERL+ ++ K++++AD IR 
Sbjct: 414 ALVQGMDLFGLLRQEWVREIECPLFVKGIDLDSKFIDQRIAERLLFIQNKEWAAADEIRN 473

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
           +L  KG  L+D K+   G+R+T W+ K
Sbjct: 474 ELAKKGIALKDEKDSQTGERITTWEVK 500


>gi|319405467|emb|CBI79086.1| Cysteinyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 502

 Score =  428 bits (1101), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/501 (45%), Positives = 310/501 (61%), Gaps = 47/501 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++ YNTL RK  +F  ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3   ELRFYNTLTRKKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITD+DDKI  +A  ++P++ +NDAI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYARNITDVDDKINAKAAFQYPNLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++ +LI+ ++  G+AY A+N I+F   S+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRFLIERLLEKGYAYIADNHILFSVGSMGDNPRYGMFAKRSLDEMRAGARIE 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS-----SHYLG---- 228
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS     S Y G    
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGIPVLGRPGWHIECSAMSMAKLLSPYGGGFVC 242

Query: 229 -----KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG+DLIFPHHENEIAQSC A   E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETK--KFGG-------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NF+TI  LLE    +F G       R W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFVTIRSLLENDFFEFAGILSDEIKRIWAGLSIRFSMLQTHYREPLNWTMQRLVQSSNEL 362

Query: 335 SKWPQTSTS-------KGIIDPAVLSALYNDLNTVSAIQALHKLARES-----TKNHDLL 382
             W +   S       K  +D +++  L NDLNT + I  L K  ++       +  D L
Sbjct: 363 YHWYELLRSEKWCLDDKQSVDSSLIKTLSNDLNTWNTITILRKFYKKHNVVALARGMDFL 422

Query: 383 PIFNAS---AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            +            + + K H +      I++ + ERL L+  K++++AD IR +L + G
Sbjct: 423 GLLRQEFIKEKECPLFISKMHFDLQF---IDQRIAERLCLIHNKEWAAADKIRDELAAGG 479

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
             L+D K+P  G+R+T W+ K
Sbjct: 480 IFLKDSKDPQTGERITTWETK 500


>gi|49475313|ref|YP_033354.1| cysteinyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|61216197|sp|Q6G5G9|SYC_BARHE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49238119|emb|CAF27326.1| Cysteinyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 503

 Score =  427 bits (1097), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/513 (44%), Positives = 313/513 (61%), Gaps = 68/513 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++ YNTL RK   F  ID + +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ YG
Sbjct: 2   RELRFYNTLTRKKENFIPIDATRVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITD+DDKI  RA  E+P + +NDAI  +T     QF +DT  L CL PT +
Sbjct: 62  NEHVIYARNITDVDDKINARAAYEYPELALNDAIRQLTQLTYTQFQQDTMALGCLPPTIE 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRV 179
           PRAT+H+ +M  LI+ ++  GHAY+A N ++F  SSI   P+YGSF++R +DE + G RV
Sbjct: 122 PRATDHLEEMRSLIERLLEKGHAYKAENHVLFSVSSIRNDPHYGSFAKRSLDEMRAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS-----SHYLG--- 228
               +K+   DF+LWK S   EPGW SP G    GRPGWHIECSAMS     + Y G   
Sbjct: 182 DVASYKREEMDFVLWKPSAEGEPGWTSPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGLT 241

Query: 229 ------KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                  VFDIHGGGLDLIFPHHENEIAQSC A   E+ AN+W+HNGFL +EG+KMSKS 
Sbjct: 242 CDDPTENVFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANLWMHNGFLQVEGKKMSKSL 301

Query: 283 GNFITINELLETK--KFGG-------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
            NFITI  +LE+   +F G       ++W     R +ML THYREP+++T QRL ++   
Sbjct: 302 SNFITIRSILESDFFEFNGVLTNEMKQNWAGLSARFSMLQTHYREPLNWTAQRLMQSSSE 361

Query: 334 LSKW--------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK--------------- 370
           L +W         +      +ID ++++AL +DLNT  A+  L K               
Sbjct: 362 LYRWYELLRCEKTEMEKKNEVIDDSLINALSDDLNTPKALTLLRKFYKRGNAVSLASGMN 421

Query: 371 ---LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
              L R+        P+F          + K  L++     I++ + ERL L+  K++++
Sbjct: 422 FFGLLRQEWVRDGKCPLF----------MRKTSLDEKF---IDQRIAERLRLIHNKEWTA 468

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           AD IR +L ++G +L+D K+P  G+R T W+ K
Sbjct: 469 ADTIRDKLAAEGIVLKDIKDPQTGERTTMWEIK 501


>gi|148254912|ref|YP_001239497.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166200130|sp|A5EHE7|SYC_BRASB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146407085|gb|ABQ35591.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 472

 Score =  426 bits (1095), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/476 (45%), Positives = 297/476 (62%), Gaps = 29/476 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+T  R+   F  +  +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 2   ELRLYDTATREKRPFVPLHRNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGA 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRNITD+DDKI  RA ++ P +P+N+AI  +T    +QF +D   L CL PT +P
Sbjct: 62  EHVTYVRNITDVDDKINARAARDFPGLPLNEAIRNVTELTERQFHEDVDALGCLRPTIEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------IPNYGSFSRRKIDEQKMG 176
           RAT HI +M  +I+ ++  G AY A + ++F  ++       +P YG+ + R +DE   G
Sbjct: 122 RATEHIAEMRDIIERLVAGGFAYVAEDHVLFSPAAMNAANKVLPRYGALANRSLDEMIAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDI 233
            RV    +KK+  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FDI
Sbjct: 182 ARVDVAPYKKDATDFVLWKPSKPGEPSWPSPAGIAAEGRPGWHIECSAMSWKHLGETFDI 241

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL+FPHHENE+AQSCCA    + AN+W+HNGFL +EG KMSKS GNF+TI E+L 
Sbjct: 242 HGGGIDLVFPHHENEVAQSCCAFHTARMANVWMHNGFLQVEGEKMSKSLGNFVTIREVLA 301

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAV 351
                   WP  V+RL ML THYR PID+T++ L E+   +  W +T+    +G    AV
Sbjct: 302 -------DWPGEVVRLNMLKTHYRSPIDWTLRGLEESAKAVDDWYRTAGDLREGRPADAV 354

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHILGI--------EVCKEHLN 402
           + AL +D+NT   +  LH L  E+     D +  F  S  +LG            K+  +
Sbjct: 355 IEALRDDINTPLMVAVLHGLRNEAASGGVDDVARFVGSLRLLGFLAEDAAQWRARKQQAS 414

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +E L+ ER      K F  +D +R +L + G +L+D K  D G+ +T W+
Sbjct: 415 GVDAAKVEGLIAERTAARARKDFKESDRLRDELAAMGVVLKDGKGAD-GKPVTTWE 469


>gi|319898705|ref|YP_004158798.1| Cysteinyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402669|emb|CBI76215.1| Cysteinyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 502

 Score =  424 bits (1090), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 224/501 (44%), Positives = 305/501 (60%), Gaps = 47/501 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K++ YNTL RK  +F+ ID + +R+YVCGPTVYD+AHIGNAR +I+FDVL+RLLR+ YGE
Sbjct: 3   KLRFYNTLTRKKEDFKPIDATKVRLYVCGPTVYDYAHIGNARSVIIFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITD+DDKI  +A  ++P + +N+AI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYARNITDVDDKINAKAALQYPDLELNNAIHQLTEYTSYQFQQDTLALGCLQPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++  LI+ ++  G+AY A++ I+F  SS+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRSLIERLLEKGYAYIADDHILFSVSSMGDNPRYGMFAKRSLDEMRAGARID 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS-----SHYLG---- 228
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS     S Y G    
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGISVLGRPGWHIECSAMSMAKLLSPYGGGLVC 242

Query: 229 -----KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG DLIFPHHENEIAQSC     E+ AN WIHNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGSDLIFPHHENEIAQSCSVFGTERMANFWIHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NFITI  LLE   F           R W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFITIRSLLENDFFEFANVLSKEVKRIWAGLSIRFSMLQTHYREPLNWTMQRLVKSSSEL 362

Query: 335 SKWPQT-------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLL 382
            +W +        S +   +D +++  L ND+NT + I  L K  +E          D L
Sbjct: 363 YRWYELLRREKYYSDNNQSVDSSLIETLSNDINTSNTITILRKFYKEQNAVALAHGMDFL 422

Query: 383 PIFN---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            +            + + K H +      I++ + ERL L+  K++++AD IR +L + G
Sbjct: 423 GLLRQELVKKKECPLFISKMHFDLQF---IDQRIAERLCLIHNKEWAAADKIRDELAAGG 479

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
             L+D K+P  G+R+T W+ K
Sbjct: 480 IFLKDSKDPQTGERITTWEMK 500


>gi|312114423|ref|YP_004012019.1| cysteinyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311219552|gb|ADP70920.1| cysteinyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 449

 Score =  421 bits (1082), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 220/465 (47%), Positives = 282/465 (60%), Gaps = 30/465 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+K+YNT  R+   F+ IDP  +RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 2   KLKLYNTRTRRKELFRPIDPKAVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYGA 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V Y RNITD+DDKI  RA  E  SI        +T +   QF  D   +  L PT +P
Sbjct: 62  EHVIYARNITDVDDKINARAAAEGVSI------RELTERTAAQFHADAAAIGALPPTIEP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +MI L++ ++  GHAY A   ++F+  S  +YG  SRR +D+ + G RV    
Sbjct: 116 RATEHIAEMIALVERLVERGHAYAAEGHVLFNVPSDDDYGGLSRRSVDDMRAGARVEVAP 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S   EPGWESPWG GRPGWH+ECSAM+  +LG VFDIHGGG+DL+FP
Sbjct: 176 YKRDPMDFVLWKPSEGAEPGWESPWGFGRPGWHLECSAMAEKHLGTVFDIHGGGIDLLFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA   E  AN W+HNG L +EG+KMSKS GNFITI +LL       + WP
Sbjct: 236 HHENELAQSTCAHDTEVMANYWVHNGHLQVEGQKMSKSLGNFITIRDLL-------KDWP 288

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSA------ 354
             VIRL ML THYR+P+D+T + L E++ +L +W        S+  +D    +       
Sbjct: 289 GDVIRLNMLRTHYRQPMDWTAKGLAESDQMLRRWRTNLSHEASEDDLDSKDFAELEFFRR 348

Query: 355 -LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
            L +DLNT  AI  +HK+     K       F      LG       L       IE  +
Sbjct: 349 DLADDLNTPMAIAEIHKMGPSGRK-------FALDLLGLGEPAEDPRLMAVDETGIEARI 401

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             RL   K K ++ AD IR +L + G  L D KNP  G+  T W+
Sbjct: 402 TARLAARKSKNWAEADRIRDELAAMGVALMDAKNPATGEIETTWE 446


>gi|27378901|ref|NP_770430.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|61216344|sp|Q89NP8|SYC_BRAJA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|27352051|dbj|BAC49055.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 460

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 217/466 (46%), Positives = 292/466 (62%), Gaps = 39/466 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+TL ++   F  +D +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 2   ELRLYDTLTKEKRTFVPLDANNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI +RA ++ P +P+N+AI  +T +  +QF  D   L  L P+ +P
Sbjct: 62  AHVKYVRNITDVDDKINDRAARDFPGLPLNEAIREVTEQTGKQFHADVDALGALRPSVEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFD-------TSSIPNYGSFSRRKIDEQKMG 176
           RAT HI +M  +I+ ++  G AY A + ++F         S++P YG+ S R +DE   G
Sbjct: 122 RATEHIGEMREIIERLVAGGFAYVAEDHVLFSPQAMNAANSTLPRYGALSNRSLDEMVAG 181

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDI 233
            RV    +KK   DF+LWK S P EP W SP G   +GRPGWHIECSAM+  +LG+ FDI
Sbjct: 182 ARVDVAPYKKGSTDFVLWKPSKPGEPSWPSPAGIAAQGRPGWHIECSAMAWKHLGEYFDI 241

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL+FPHHENE+AQ+CCA   E+ AN W+HNGFL +E  KMSKS GNFITI+ELL 
Sbjct: 242 HGGGIDLVFPHHENEVAQTCCAFHRERMANYWMHNGFLQVESEKMSKSLGNFITIHELLA 301

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---- 349
                   WP  V+RL ML THYR PID+T++ L E+   L  W + +     +DP    
Sbjct: 302 -------DWPGEVLRLNMLKTHYRSPIDWTMKSLEESAKTLDDWYRVAAD---VDPGRPA 351

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEH 400
            +V+  L +DLNT  AI ALH L     +N D +     S  +LG         E  K+ 
Sbjct: 352 ASVVEPLLDDLNTSLAIAALHGL-----RNSD-VSALAGSLRLLGFLSESAAQWEDRKQK 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +   +  +E+L+ ER      K F  +D IR QL + G  ++D K
Sbjct: 406 ASGVDAGEVERLISERTAARGRKDFKESDRIRDQLAAMGVAIKDSK 451


>gi|306845278|ref|ZP_07477854.1| cysteinyl-tRNA synthetase [Brucella sp. BO1]
 gi|306274437|gb|EFM56244.1| cysteinyl-tRNA synthetase [Brucella sp. BO1]
          Length = 506

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 229/501 (45%), Positives = 302/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELLETK--KFGGRS-------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     + G  S       W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWSDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K+ D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHAGAVAAALCDDLNSWAAITAL----RQAFKSRDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLFDPYFVTASDVPIFAKADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 QEGVQLKDSKDPATGERITTW 502


>gi|256254697|ref|ZP_05460233.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261221878|ref|ZP_05936159.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260920462|gb|EEX87115.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
          Length = 506

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/501 (45%), Positives = 303/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGTPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 QEGVQLKDSKDPATGERITTW 502


>gi|23501564|ref|NP_697691.1| cysteinyl-tRNA synthetase [Brucella suis 1330]
 gi|161618646|ref|YP_001592533.1| cysteinyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225627175|ref|ZP_03785213.1| Cysteinyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701461|ref|ZP_05163289.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704007|ref|ZP_05165835.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254709799|ref|ZP_05171610.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254713802|ref|ZP_05175613.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717140|ref|ZP_05178951.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031289|ref|ZP_05444903.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256060801|ref|ZP_05450963.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256159399|ref|ZP_05457181.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256369113|ref|YP_003106621.1| cysteinyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168427|ref|ZP_05755238.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260566743|ref|ZP_05837213.1| cysteinyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218954|ref|ZP_05933235.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261317337|ref|ZP_05956534.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321547|ref|ZP_05960744.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261324795|ref|ZP_05963992.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261752004|ref|ZP_05995713.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261754663|ref|ZP_05998372.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261757891|ref|ZP_06001600.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988375|ref|ZP_06100932.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265997841|ref|ZP_06110398.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852039|ref|ZP_06792712.1| cysteinyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|38258390|sp|Q8G1N5|SYC_BRUSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082060|sp|A9MA50|SYC_BRUC2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|23347476|gb|AAN29606.1| cysteinyl-tRNA synthetase [Brucella suis 1330]
 gi|161335457|gb|ABX61762.1| cysteinyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225618010|gb|EEH15054.1| Cysteinyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|255999273|gb|ACU47672.1| cysteinyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260156261|gb|EEW91341.1| cysteinyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260924043|gb|EEX90611.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294237|gb|EEX97733.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296560|gb|EEY00057.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261300775|gb|EEY04272.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261737875|gb|EEY25871.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261741757|gb|EEY29683.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261744416|gb|EEY32342.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|262552309|gb|EEZ08299.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660572|gb|EEZ30833.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294820628|gb|EFG37627.1| cysteinyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 506

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/501 (45%), Positives = 303/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 QEGVQLKDSKDPATGERITTW 502


>gi|17987555|ref|NP_540189.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|225852198|ref|YP_002732431.1| cysteinyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256044370|ref|ZP_05447274.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113213|ref|ZP_05454081.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264294|ref|ZP_05466826.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563723|ref|ZP_05834209.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265990788|ref|ZP_06103345.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994624|ref|ZP_06107181.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|38258395|sp|Q8YG89|SYC_BRUME RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765182|sp|C0RI19|SYC_BRUMB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|17983259|gb|AAL52453.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|225640563|gb|ACO00477.1| cysteinyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153739|gb|EEW88831.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|262765737|gb|EEZ11526.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001572|gb|EEZ14147.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094565|gb|EEZ18363.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408697|gb|ADZ65762.1| cysteinyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538421|gb|ADZ86636.1| cysteinyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 506

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/501 (45%), Positives = 303/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 QEGVQLKDSKDPATGERITTW 502


>gi|62289637|ref|YP_221430.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699565|ref|YP_414139.1| cysteinyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189023890|ref|YP_001934658.1| cysteinyl-tRNA synthetase [Brucella abortus S19]
 gi|237815131|ref|ZP_04594129.1| cysteinyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254693431|ref|ZP_05155259.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254697084|ref|ZP_05158912.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254729980|ref|ZP_05188558.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257197|ref|ZP_05462733.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545608|ref|ZP_05821349.1| cysteinyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260757658|ref|ZP_05870006.1| cysteine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260761485|ref|ZP_05873828.1| cysteine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883467|ref|ZP_05895081.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213685|ref|ZP_05927966.1| cysteine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|297248048|ref|ZP_06931766.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309440|sp|Q57E65|SYC_BRUAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894886|sp|Q2YN22|SYC_BRUA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558619|sp|B2S4T7|SYC_BRUA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|62195769|gb|AAX74069.1| CysS, cysteinyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615666|emb|CAJ10653.1| Cysteinyl-tRNA synthetase, class Ia [Brucella melitensis biovar
           Abortus 2308]
 gi|189019462|gb|ACD72184.1| Cysteinyl-tRNA synthetase, class Ia [Brucella abortus S19]
 gi|237789968|gb|EEP64178.1| cysteinyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260097015|gb|EEW80890.1| cysteinyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260667976|gb|EEX54916.1| cysteine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260671917|gb|EEX58738.1| cysteine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260872995|gb|EEX80064.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915292|gb|EEX82153.1| cysteine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|297175217|gb|EFH34564.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 506

 Score =  419 bits (1077), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/501 (45%), Positives = 303/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDHWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 QEGVQLKDSKDPATGERITTW 502


>gi|254688949|ref|ZP_05152203.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260754439|ref|ZP_05866787.1| cysteine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260674547|gb|EEX61368.1| cysteine-tRNA ligase [Brucella abortus bv. 6 str. 870]
          Length = 506

 Score =  418 bits (1075), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 228/501 (45%), Positives = 303/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDHWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALG 422

Query: 386 NASAHILG------IEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G      + V    +     +   AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLLDPYFVTVSDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 QEGVQLKDSKDPATGERITTW 502


>gi|254718815|ref|ZP_05180626.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983799|ref|ZP_06096534.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306837536|ref|ZP_07470411.1| cysteinyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662391|gb|EEZ32652.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306407428|gb|EFM63632.1| cysteinyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 506

 Score =  417 bits (1073), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/501 (45%), Positives = 302/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D   L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVAALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHAGAVAAALCDDLNSWAAITAL----RQAFKARDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLFDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 REGVQLKDSKDPATGERITTW 502


>gi|163842948|ref|YP_001627352.1| cysteinyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|187629797|sp|B0CL02|SYC_BRUSI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|163673671|gb|ABY37782.1| cysteinyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 506

 Score =  417 bits (1072), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/501 (45%), Positives = 302/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN L R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNMLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+P  G+R+T W
Sbjct: 482 QEGVQLKDSKDPATGERITTW 502


>gi|148560736|ref|YP_001258660.1| cysteinyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|187629796|sp|A5VPL3|SYC_BRUO2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148371993|gb|ABQ61972.1| cysteinyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 506

 Score =  416 bits (1069), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 227/501 (45%), Positives = 302/501 (60%), Gaps = 52/501 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 7   QLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT QP
Sbjct: 67  QHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 127 RATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMDARKGPRYGALARRSLDEMLAGAR 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV 230
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L     G +
Sbjct: 187 VDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGL 246

Query: 231 ---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                    FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 247 KCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKS 306

Query: 282 NGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L     +  ++G  +    W     RL+ML THYREPI++T QRL E+  
Sbjct: 307 LGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESAD 366

Query: 333 LLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  + 
Sbjct: 367 ELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALG 422

Query: 386 NASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L 
Sbjct: 423 EGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDELL 481

Query: 437 SKGFILEDYKNPDNGQRMTRW 457
            +G  L+D K+   G+R+T W
Sbjct: 482 QEGVQLKDSKDSATGERITTW 502


>gi|153009938|ref|YP_001371153.1| cysteinyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|187629834|sp|A6X270|SYC_OCHA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151561826|gb|ABS15324.1| cysteinyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 505

 Score =  415 bits (1067), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 228/505 (45%), Positives = 301/505 (59%), Gaps = 60/505 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R   EF  +D  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG 
Sbjct: 6   QLRLYNTLTRMKEEFSPLDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGA 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTY RNITD+DDKI  RA +++P +  N+AI  +T     QF  D T L  L P+ QP
Sbjct: 66  EHVTYARNITDVDDKINARAARDYPDLAFNEAIRRVTESTNAQFQADVTALGNLQPSVQP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +RR +DE   G R
Sbjct: 126 RATEHMDEMRAMIDRLVKLGVAYVAEDHVLFSPSAMNERKGPRYGALARRSLDEMLAGAR 185

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS------------ 223
           V    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS            
Sbjct: 186 VDVASYKRDEMDFVLWKPSKEGEPGWSSPAGIAVLGRPGWHIECSAMSMAKLLEPFGGGL 245

Query: 224 --SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                L   FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS
Sbjct: 246 KCDDPLKNQFDIHGGGIDLVFPHHENEIAQSCCAFGTERMANIWMHNGFLQVEGQKMSKS 305

Query: 282 NGNFITINELLET--------KKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            GNFITI ++L               R  W     RL+ML THYREPI++T QRL E+  
Sbjct: 306 LGNFITIRDVLNEGLPQLGVWDDVDARDRWIGLAARLSMLQTHYREPINWTAQRLAESAD 365

Query: 333 LLSKW-----------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
            L +W           P+T T+ G     V+ AL +DLN+ +AI AL    R++ K  D+
Sbjct: 366 ELHRWYGLLRDRKFTVPETLTAVG----EVVEALSDDLNSWTAITAL----RKAFKARDI 417

Query: 382 LPIFNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIR 432
             +    A +LG+      + ++I +         AIE  + ERL  +  K ++ AD IR
Sbjct: 418 TGLGEGMA-LLGLLDPHFVMAEDIPVFAKAEVDHQAIEARIAERLRFINEKNWAEADRIR 476

Query: 433 KQLESKGFILEDYKNPDNGQRMTRW 457
            +L  +G  L+D K+P  G+R T W
Sbjct: 477 DELLQEGVQLKDGKDPATGERTTSW 501


>gi|144897394|emb|CAM74258.1| Cysteinyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 459

 Score =  412 bits (1060), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/476 (47%), Positives = 280/476 (58%), Gaps = 45/476 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R+   FQ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL   Y    V
Sbjct: 5   LYNTLTRRKEAFQPLSPDHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLSRLY--PSV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITD+DDKI +R++         + I++IT++ TQ F  D   L  L PT +PRAT
Sbjct: 63  TYVRNITDVDDKINQRSKDS------GEPIAVITARTTQMFHDDIAELNALPPTIEPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HI QMI +IQ +I  GHAY A   ++F+  S+ +YG  SRR +DE   G RV    +KK
Sbjct: 117 AHIQQMIDMIQVLIAKGHAYAAEGHVLFEVGSMADYGQLSRRSMDEMIAGARVEVAPYKK 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           N  DF+LWK STP  PGW+SPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+FPHHE
Sbjct: 177 NAGDFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMSGQYLGQTFDIHGGGQDLVFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS CA+     A  W+HNG+L +EG KMSKS GNF T+ ELLE         P   
Sbjct: 237 NEIAQSQCANGA-PFARYWLHNGYLMVEGEKMSKSLGNFFTVRELLEAA-------PGEA 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALYNDL 359
           IRL ML THY +P D+T + L +A   L +            T    +  AV +AL +DL
Sbjct: 289 IRLCMLSTHYHQPFDWTAEGLKQARATLDRLYNALRGTADAGTEAVDLPLAVQAALEDDL 348

Query: 360 NTVSAIQALHKL------ARESTKNHDLLPIFNASAHILGIEVCKEHL----------NK 403
           NT  AI  LH+L      A  +           A+   LG+ +    +          + 
Sbjct: 349 NTPLAISHLHELAGALNKAESAADKARARGALLAAGQALGVLLQDPEVWFRWQSAGADSG 408

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                IE L+Q RL   K K F+ AD IRK+L   G +LED      G + T WK+
Sbjct: 409 PDEAGIESLIQARLEARKAKNFAEADRIRKELADSGVVLED------GPQGTTWKR 458


>gi|90423589|ref|YP_531959.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|109894931|sp|Q216P6|SYC_RHOPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|90105603|gb|ABD87640.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 488

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 220/496 (44%), Positives = 299/496 (60%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL ++  +F  +DPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 3   LRLYDTLTKEKRDFAPLDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGPD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI +RA ++ P +P+N+AI  +T +  +QF  D   L CL PT +PR
Sbjct: 63  HVKYVRNITDVDDKINDRATRDFPGLPLNEAIRKVTEQTEKQFHDDVDALGCLRPTIEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------IPNYGSFSRRKIDEQKMGT 177
           AT HI +M  +I  ++  G AY A + ++F   +       +P YGS + R +DE   G 
Sbjct: 123 ATEHIGEMRSIIDRLVEGGFAYVAEDHVLFSPQAMNAADGILPRYGSLANRSLDEMIAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIH 234
           RV    +K++  DF+LWK S P EP W SP G   +GRPGWHIECSAM+  +LG+ FDIH
Sbjct: 183 RVDVAPYKRDVTDFVLWKPSKPGEPSWPSPAGIATQGRPGWHIECSAMAWKHLGEKFDIH 242

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL+FPHHENE+AQSCCA   ++ A  W+HNGFL +EG KMSKS GNF+TI++  + 
Sbjct: 243 GGGIDLVFPHHENEVAQSCCAFHTDRMATTWMHNGFLQVEGEKMSKSLGNFLTISDQRD- 301

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----A 350
                  W   V+RL ML THYR+PID+T   L+E    L +W +   S    DP     
Sbjct: 302 ------QWGPAVLRLNMLKTHYRQPIDWTQHNLSETGRELDRWFEFLESASGGDPNDAND 355

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL--------- 401
           V+SAL +DLNT +AI AL    R   KN +   +  +   +LGI + +E +         
Sbjct: 356 VMSALADDLNTSAAITAL----RVQFKNKNSAAL-RSGLDLLGIPIGREFIQGRKHVRLY 410

Query: 402 -----------NKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                          S A        I++L+  R      K F  +D IR QL + G +L
Sbjct: 411 AEGAFVAAGGGTATFSTASSSVERSDIQQLIDARAAARARKDFKESDRIRDQLAAMGVVL 470

Query: 443 EDYKNPDNGQRMTRWK 458
           +D K+ D G+  T W+
Sbjct: 471 KDGKDAD-GKPTTTWE 485


>gi|154248635|ref|YP_001419593.1| cysteinyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|229558802|sp|A7IPJ0|SYC_XANP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154162720|gb|ABS69936.1| cysteinyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 462

 Score =  412 bits (1059), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 225/474 (47%), Positives = 292/474 (61%), Gaps = 34/474 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R     + +DP+N+RMYVCGPTVYD AHIGNARP+IVFDVL+RLLR  YGE
Sbjct: 2   ELRLYNTLTRSKDTLRPLDPANVRMYVCGPTVYDHAHIGNARPVIVFDVLFRLLRRLYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI  RA +    I I D    +T +  + F +DT  L CL PT +P
Sbjct: 62  GHVKYVRNITDVDDKINARAAER--GITIRD----LTEETYRWFREDTAALNCLRPTVEP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +M  LI++++  GHAY A   ++F   S+P+YG  SRR +DE   G RV    
Sbjct: 116 RATEHIAEMRTLIESLVASGHAYVAEEHVLFHVPSMPDYGRLSRRPLDEMVAGARVDVAP 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +K++P DF+LWK S    PGW SP G    GRPGWHIECSAMS  +LG+ FDIHGGG+DL
Sbjct: 176 YKRDPMDFVLWKPSEAGIPGWPSPCGIATPGRPGWHIECSAMSWRHLGETFDIHGGGIDL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA      A +W+HNGFL LEG KMSKS GNF+TI ELL        
Sbjct: 236 VFPHHENEIAQSRCAFHTGVMAQMWMHNGFLMLEGEKMSKSLGNFVTIRELLA------- 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKG-IIDPAVLS 353
            WP  V+RLAML THYR+PI++T Q L  A   L KW       +  T +G   +  +  
Sbjct: 289 EWPGEVLRLAMLSTHYRQPINWTRQGLGFAAKTLDKWYRIIGEAEAETGEGNPFETEIAD 348

Query: 354 ALYNDLNTVSAIQALHKL---ARESTKNHDLLPIFNASAHILGIEVCKE---HLNKNISI 407
            L +DLNT S I  LH L   A     +  L   F  +A++LG+    E      +  +I
Sbjct: 349 RLADDLNTPSVITHLHHLAEVAEHEEASSALRRRFKGAANLLGLLGDTETGWRARQKEAI 408

Query: 408 AIEK-----LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           A+++     L+ +RL   K K F  AD IR++L ++G +L D K+      ++R
Sbjct: 409 ALDEGVIAGLIADRLAARKAKDFKRADQIREELAAQGVVLMDNKDGTTSWEVSR 462


>gi|319408293|emb|CBI81946.1| Cysteinyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 502

 Score =  411 bits (1057), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 224/501 (44%), Positives = 302/501 (60%), Gaps = 49/501 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL RK   F  ID + +R+YVCGPTVYD+AHIGNAR +IVFD+L+R LR+ YGE 
Sbjct: 4   LRFYNTLTRKKENFTPIDAAKVRLYVCGPTVYDYAHIGNARSVIVFDILFRFLRHVYGED 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKI  RA  ++P + +NDAI  +T     QF KDT  L CL PT QPR
Sbjct: 64  HVIYARNITDVDDKINARAIHKYPELALNDAIRQLTECTYDQFQKDTEALGCLLPTSQPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVPE 181
           AT+H+ ++  LI+ ++  GHAY A N I+F  SS+   P YG F++R +DE +  +R+  
Sbjct: 124 ATDHLEEIRSLIERLLEKGHAYIAGNHILFSISSMGEYPRYGEFAKRSLDEMRADSRIDI 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYL----------- 227
             +KK   DF+LWK S   EPGW SP    G GRPGWHIECSAMS   L           
Sbjct: 184 AIYKKEKMDFVLWKPSQEWEPGWPSPAGIPGLGRPGWHIECSAMSMAKLLAPYGGGLNCD 243

Query: 228 ---GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
                VFDIHGGG+DL+FPHHENEIAQSC A   ++ AN W+HNGFL +EG+KMSKS GN
Sbjct: 244 DLAANVFDIHGGGIDLLFPHHENEIAQSCSAFGTKRMANFWMHNGFLQVEGKKMSKSLGN 303

Query: 285 FITINELLETK--KFGG-------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           FITI  LLE+   +F         ++W    IR +ML THYREP+++T  RL ++   L 
Sbjct: 304 FITIRSLLESDFLEFNDALTDEIRQNWAGLSIRFSMLQTHYREPLNWTTHRLAQSSSELY 363

Query: 336 KWPQTSTSKGI-------IDPAVLSALYNDLNTVSAIQALHKLARES-----TKNHDLLP 383
           +W +    +         ID ++++ L +DLNT +A   L K  +E       +  DL  
Sbjct: 364 RWYEFLRCEKCCLDDDKSIDESLINTLSDDLNTSNAFTILRKFYKEGNAIALARGMDLFG 423

Query: 384 IFNASAHILGIE----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           +      +  IE    V K +L+      I++ + ERL L+  K++ +AD IR +L   G
Sbjct: 424 LLRQE-WVQEIECPLFVRKTYLDLKF---IDQRIAERLQLIHNKEWEAADKIRDELAVGG 479

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
             L+D K+P  G+R+T W+ K
Sbjct: 480 ISLKDEKDPQTGERITTWEIK 500


>gi|84686990|ref|ZP_01014873.1| cysteinyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664964|gb|EAQ11445.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 457

 Score =  410 bits (1055), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 212/441 (48%), Positives = 270/441 (61%), Gaps = 17/441 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK +NT  R    F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR  YG 
Sbjct: 3   EIKFHNTATRSKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLREVYGP 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRN TD+DDKIIERA ++         I  ITS+ TQ ++ D   L  L PT  P
Sbjct: 63  NHVTYVRNFTDVDDKIIERANRD------GKEIDQITSETTQWYLDDMAALGALEPTAMP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI  M+ +I+ +I  GHAY A   ++F   S  +YG  S R +D+   G RV    
Sbjct: 117 RATQHIDDMVTMIEGLIDSGHAYAAEGHVLFAVDSYDDYGKLSGRSVDDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK +   EPGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 177 YKRNPMDFVLWKPARDGEPGWDSPWGRGRPGWHIECSAMSYGLLGESFDIHGGGNDLMFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+++LLE      +  P
Sbjct: 237 HHENEIAQSKCAHAGAGFANVWLHNEMLQVEGKKMSKSLGNFFTVHDLLE------QGVP 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPAVLSALYNDLNT 361
             VIR   L THYR+P+D+T ++  EAE  L KW +   S   G +  A++ A+ NDLNT
Sbjct: 291 GEVIRFVFLGTHYRKPMDWTEKKREEAEATLGKWHRMRGSNKPGAVPKAIVDAVANDLNT 350

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC---KEHLNKNISIAIEKLVQERLI 418
             AI  LHKLA        L  +       +  E+    +E   + +S    KL Q R+ 
Sbjct: 351 PEAISVLHKLANIGDIEGLLGGLDFLGLKTIDTEMLDLIREGEQERLSELEAKLTQLRIG 410

Query: 419 LLKMKKFSSADYIRKQLESKG 439
            +  K +S  D ++  L + G
Sbjct: 411 AMNTKDYSQVDAMKSALIAAG 431


>gi|288959132|ref|YP_003449473.1| cysteinyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911440|dbj|BAI72929.1| cysteinyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 458

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 215/476 (45%), Positives = 292/476 (61%), Gaps = 42/476 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ + P ++ MYVCGPTVYD AHIGNARP++VFD+L+RLL   Y   
Sbjct: 3   LDLYNTLTRRKERFEPLRPDHVGMYVCGPTVYDTAHIGNARPVVVFDLLFRLLSRLY--P 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII+RAR         + I  +T++ T  F  D   L  L PT +PR
Sbjct: 61  AVTYVRNITDVDDKIIDRARDS------GEPIDALTARTTDLFHADMDALNALRPTIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI LI  +I  G+AY A   ++F   S+P+YG  SRR +++   G RV    +
Sbjct: 115 ATQHIGQMIALIATLIERGNAYAAEGHVLFSVPSMPSYGQLSRRSLEDMIAGARVEVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++ +DF+LWK S+P +PGW+SPWGRGRPGWHIECSAM+  +LG  FDIHGGGLDLIFPH
Sbjct: 175 KRDASDFVLWKPSSPDQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSCCA+  ++ A  W+HNGF+ +EG KMSKS GNF T+++LL+        +P 
Sbjct: 235 HENEIAQSCCANGTDRLARTWVHNGFVTVEGEKMSKSLGNFFTVHDLLD-------EFPG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYNDL 359
             IRL +L  HYR+P+DFT + + +A+  L +W Q      + +   +   VL+AL +DL
Sbjct: 288 EAIRLTLLSAHYRQPLDFTREGIRQAKGALDRWYQALRGDPAPAAAAVPFDVLAALEDDL 347

Query: 360 NTVSAIQALHKL------ARESTKNHDLLPIFNASAHILGI---------EVCKEHLNKN 404
           N+  AI  LH+L      AR   +         A+   LG+                 + 
Sbjct: 348 NSPLAIAHLHELATAVNKARSDAEKAAAKGALLAAGQQLGLLRQDPEAWFRWAPTGGVEG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +S A +E+L+ +R      K F+ AD IRK+L  KG +LED      G + T WK+
Sbjct: 408 LSDAEVERLIIDRKTARAAKNFAEADRIRKELADKGIVLED------GPQGTSWKR 457


>gi|56696997|ref|YP_167359.1| cysteinyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|61216118|sp|Q5LRJ6|SYC_SILPO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56678734|gb|AAV95400.1| cysteinyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 465

 Score =  408 bits (1049), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 214/443 (48%), Positives = 275/443 (62%), Gaps = 30/443 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R   EF  IDP N+RMYVCGPTVYD AH+GN RP++VFDVLYRLLR+ YG  
Sbjct: 4   IKLHNTRTRTKEEFVPIDPDNVRMYVCGPTVYDRAHLGNGRPVVVFDVLYRLLRHVYGAD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +     PI D    IT++ TQ F+ D   L  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAER--GRPIGD----ITAETTQWFLDDMGALGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+ ++  GHAYEA   ++F   S   +YG  S R +D+   G RV    
Sbjct: 118 ATQYIPQMVAMIEELVAKGHAYEAEGHVLFAVDSWKEHYGKLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK STP  PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMSYELLGESFDIHGGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      AN W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 238 HHENEIAQSCCAHPEGHFANFWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----PAVLSALYNDL 359
             VIR   L THYR+P+D+T ++  EAE  L KW + +     ++    P  + AL +DL
Sbjct: 292 GEVIRFVFLSTHYRKPMDWTEKKAKEAEATLRKWWRLTAPLDEMEIKPSPQFIDALTDDL 351

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE------VCKEHLNKNISI--AIEK 411
           NT  AI  LH+LA+E  K++  L    A   +LG++      V     + ++ +  A   
Sbjct: 352 NTPGAIAELHRLAKE--KDYAAL---EAGLEMLGLQETVNFGVASFGFSTSVEVLEAAND 406

Query: 412 LVQERLILLKMKKFSSADYIRKQ 434
           L +  +     K F  AD ++K 
Sbjct: 407 LARRWMAYRDAKNFEEADRLKKS 429


>gi|149914707|ref|ZP_01903237.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter sp.
           AzwK-3b]
 gi|149811500|gb|EDM71335.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter sp.
           AzwK-3b]
          Length = 462

 Score =  408 bits (1048), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/444 (47%), Positives = 275/444 (61%), Gaps = 20/444 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT  R     + ++P N+RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG  
Sbjct: 3   IRLYNTKARAKQVLEPLNPDNVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHVYGPD 62

Query: 65  CVTYVRNITDIDDKIIERARQE-HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VTYVRN TD+DDKI  RA +       +N  I+ IT++ T  F+ D   L  L P   P
Sbjct: 63  HVTYVRNFTDVDDKINARAIENVGKGGDVNAEIARITAQTTHWFLDDMGALGALEPDAMP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT +IPQMI +I+++I  GHAYEA   ++F   S  +YG  S R +D+   G+RV    
Sbjct: 123 RATQYIPQMIAMIEDLIGRGHAYEAEGHVLFAVDSYADYGRLSGRSVDDMIAGSRVEVAP 182

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 183 YKRNPMDFVLWKPSSADLPGWDSPWGRGRPGWHIECSAMSHELLGESFDIHGGGNDLMFP 242

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+++LLE         P
Sbjct: 243 HHENEIAQSCCAHPGSGFARIWMHNEMLQVEGKKMSKSLGNFFTVHDLLE------EGVP 296

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDP--AVLSALYNDLN 360
             VIR   L THYR+P+D+T ++  EA+  L KW  Q    +G  +P  AV+ A+ +DLN
Sbjct: 297 GEVIRFVFLSTHYRKPMDWTAEKAREAQATLRKWYRQAEQGEGNAEPYVAVVEAVSDDLN 356

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-----CKEHLNKNISIAIEKLVQE 415
           T  AI  LH+L++   ++        A+   LG+              ++S    +L Q 
Sbjct: 357 TPKAITELHRLSQADDRS-----TLRATLRFLGLMADGVPDWAARPVADLSALETRLAQA 411

Query: 416 RLILLKMKKFSSADYIRKQLESKG 439
           R   ++ K FS  D ++  L + G
Sbjct: 412 RAAAMQSKDFSEVDRLKAALVAVG 435


>gi|182678882|ref|YP_001833028.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|229558617|sp|B2IEE1|SYC_BEII9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|182634765|gb|ACB95539.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 458

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 206/478 (43%), Positives = 293/478 (61%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F+ IDP+N+R+Y CGPTVYDF HIGN R +IVFD+L+R+LR  YG  
Sbjct: 3   LQLYNTLTRQKDIFEPIDPANVRLYACGPTVYDFLHIGNGRMLIVFDLLFRVLRDLYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI  RA +    I       ++T + T  F +D   L CL PT +PR
Sbjct: 63  HVRYVRNITDVDDKINARAAERGIDI------RVLTDEMTAIFHEDAKALNCLPPTVEPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ +MI +I+ ++ +GHAY A   ++FD  S+P+YG  S+R +D+   G RV    +
Sbjct: 117 ATEHMAEMIAIIEKLVANGHAYIAEGHVLFDVPSMPDYGKLSKRPLDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EPGWESPWGRGRPGWH+ECSAMS  +LG+VFDIHGGG+DL+FPH
Sbjct: 177 KRSPTDFVLWKPAKPEEPGWESPWGRGRPGWHLECSAMSWKHLGEVFDIHGGGIDLVFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQ+C A   +  AN+W+HNG L +EG+KMSKS GNF+TI ++L       + WP 
Sbjct: 237 HENEVAQTCSAFGHDVMANVWMHNGHLQVEGQKMSKSLGNFLTIRDVL-------KDWPG 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSALY 356
             +R  ML THYR+PID+T+  L E++  L +W   + +   I+P        +   AL 
Sbjct: 290 ETVRFTMLKTHYRQPIDWTLSSLRESQRELDRWYPVARAFDQINPDNIPGIPSSFRDALQ 349

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI----------- 405
           +DLNT  AI  L +L +++ +  D      A  H+L         ++++           
Sbjct: 350 DDLNTPEAITILRRLYKDALETTDY-----AGVHLLLCGKLLGLFDQSLEKWKNWKPASF 404

Query: 406 ---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              ++  E L++ER      K +  +D++R  L S G +L+     DN    T W+ K
Sbjct: 405 TVENVTFEDLIKEREEARAAKNWPKSDHLRDVLASYGIVLK-----DNKDGTTSWEAK 457


>gi|297717798|gb|ADI50042.1| cysteinyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
           L13]
          Length = 452

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 209/455 (45%), Positives = 282/455 (61%), Gaps = 30/455 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R+  +F  +DP++I+MYVCGPTVYDFAHIGNARP++VFD+L RLLR  Y + 
Sbjct: 3   LKVYNTYSRQKEDFVPLDPTHIKMYVCGPTVYDFAHIGNARPVVVFDILSRLLRQLYPK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI   A+           I  IT +  Q + +D   LA  AP   PR
Sbjct: 62  -VTYVRNITDVDDKINAAAKAS------GQTIRTITERTIQAYNEDMAALAAFAPDVTPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HIP+MI++I+++I +GHAY A   ++F   +   YG  SRR  DE   G RV    +
Sbjct: 115 ATDHIPEMIHMIEDLIANGHAYAAEGHVLFAVKTFGAYGKLSRRNHDELLAGARVEIAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS  YLGK FDIHGGG+DL FPH
Sbjct: 175 KRDPGDFVLWKPSDAETPGWDSPWGRGRPGWHIECSAMSEKYLGKTFDIHGGGIDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQSCCA++ +  A  W+HNG L + G KMSKS GNF T+ ELL   +F G S   
Sbjct: 235 HENELAQSCCANKTDYFAKYWMHNGHLTVNGEKMSKSLGNFYTVRELL--SEFTGES--- 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN 360
             +R  ++  HYR+P+D + + + + +  L +           +G ID  ++SAL +DLN
Sbjct: 290 --LRYMLMSAHYRQPLDLSKELIHQCQASLDRLYGALRGIKVYEGGIDDQMMSALLDDLN 347

Query: 361 TVSAIQALHKLARESTKNHD------LLPIFNASAHILGI-EVCKEHLNKNISIA----I 409
              A+  LH+LA  + K  D      L     AS ++LGI +   E   K  ++A    +
Sbjct: 348 VPLALARLHELATATNKAEDPQQKSQLASTLKASGYLLGILQQDPEAWFKGATLANADEV 407

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           E L+ +R      + F+ AD +R+QL   G +LED
Sbjct: 408 EALIAQRNQARSARDFAKADSLRQQLTDMGIVLED 442


>gi|119713265|gb|ABL97331.1| cysteinyl-tRNA synthetase [uncultured marine bacterium HF10_12C08]
          Length = 454

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 215/473 (45%), Positives = 288/473 (60%), Gaps = 38/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T      +F+ IDP+N+RMYVCGPTVYD+AH+GNARP+IVFD+L+RLL+  YG  
Sbjct: 3   LMLYDTFTNSKKKFEPIDPNNVRMYVCGPTVYDYAHVGNARPVIVFDILFRLLQKIYGSG 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII  A  +      N+ I ++T K    F  D   +  L PT +PR
Sbjct: 63  NVTYVRNITDVDDKIILAANDQ------NEDIGMLTEKTINYFHDDAKYVGALKPTFEPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+MI LI+ +I    AY A+  ++F ++    YG  S + +DE   G+RV  + +
Sbjct: 117 ATEHIPEMIELIEKLISKEFAYVADGNVLFSSNKFKEYGKLSGKNLDEMVAGSRVGVESY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK  +DF+LWK S   EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGG DLIFPH
Sbjct: 177 KKEESDFVLWKPSKEDEPSWKSPWGDGRPGWHIECSAMSEKLLGENFDIHGGGQDLIFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA+   K AN W+HNGF+ +EG KMSKS+GNF+T+NEL +       S+  
Sbjct: 237 HENEIAQSECANN-NKFANYWVHNGFVTVEGNKMSKSDGNFVTVNELKD-------SFQG 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALYN 357
            VIRL M+ THYR+P+++T   L E++  L KW                 D  ++  L +
Sbjct: 289 EVIRLTMISTHYRQPLNWTKDNLNESKKTLDKWYTFLSNFNGDELKDANNDNEIMETLLD 348

Query: 358 DLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILG---------IEVCKEHLNKNISI 407
           D+NT  AI  LH+  +E  + +  L+  F  SA++LG         +   KE+LN N + 
Sbjct: 349 DMNTPKAISVLHQKFKECQSGDKGLVSNFLYSANMLGLLNEKPSEWLSWKKENLNINTA- 407

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +E L+ +R      K F  AD IR +L+  G ILED  +       T WK K
Sbjct: 408 QVELLIAQRNEARSNKNFDDADRIRNELDKMGVILEDQGDE------TTWKVK 454


>gi|158423408|ref|YP_001524700.1| cysteinyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047950|sp|A8I4X6|SYC_AZOC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|158330297|dbj|BAF87782.1| cysteinyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 462

 Score =  405 bits (1042), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 223/474 (47%), Positives = 292/474 (61%), Gaps = 34/474 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F+ +DP+ +R+YVCGPTVYD AHIGNARP+IVFDVL+RLLR  YG 
Sbjct: 2   ELRLYNTLTRSKDAFRPLDPNLVRLYVCGPTVYDHAHIGNARPVIVFDVLFRLLRRLYGA 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI  RA +   SI I +    +T +    F  DT  L CL P  +P
Sbjct: 62  DHVRYVRNITDVDDKINARAAER--SISIRE----LTEETYAWFRDDTAALGCLRPDVEP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +M  LI+ ++  GHAY A   ++F   S+P YG  SRR +DE   G RV    
Sbjct: 116 RATEHILEMQALIERLVASGHAYVAEEHVLFHVPSMPEYGKLSRRPLDEMLNGARVDVAP 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK ST  +PGW SP G    GRPGWHIECSAMS  +LG+ FDIHGGG+DL
Sbjct: 176 FKRDPMDFVLWKPSTEGQPGWPSPCGIATPGRPGWHIECSAMSWRHLGETFDIHGGGIDL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA      A +W+HNGFL +EG KMSKS GNF+TI ELL        
Sbjct: 236 VFPHHENEIAQSRCAFDSGSMAQVWMHNGFLLVEGEKMSKSLGNFVTIRELLT------- 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKG-IIDPAVLS 353
            WP  V+RLAML THYR+PI++T Q +  A   L KW       +  T +G   +  +  
Sbjct: 289 DWPGEVLRLAMLSTHYRQPINWTRQGIGFAAKTLDKWYRVIGDVEAETGEGNPFESEIAD 348

Query: 354 ALYNDLNTVSAIQALHKL---ARESTKNHDLLPIFNASAHILGI--EVCKEHLNKN---I 405
            L +DLN+ SAI  LH L   A     +  L   F ++A+++G+  E   E   +    +
Sbjct: 349 RLGDDLNSPSAITHLHHLADVAEHEDASSALKRRFKSAANLMGLLHETETEWRARQRAAV 408

Query: 406 SI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           S+   AI  L+ +R    K + F++AD+IR+QL S+G +L D K+      +TR
Sbjct: 409 SVDPDAIAALIADRNAARKARDFATADHIREQLASQGIVLMDNKDGTTSWELTR 462


>gi|254464102|ref|ZP_05077513.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685010|gb|EDZ45492.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 460

 Score =  405 bits (1041), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 219/450 (48%), Positives = 276/450 (61%), Gaps = 36/450 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK   F+ ID SN+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR  YGE 
Sbjct: 8   IKLHNTKTRKKEVFEPIDASNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLREIYGED 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RN TD+DDKI  RA +          I  IT++ TQ F+ D   L  L P+H PR
Sbjct: 68  QVTYARNFTDVDDKINARAAES------GRLIGEITAETTQWFLDDMGELGALEPSHMPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+++I  GHAY A   ++F   S  + YG  S R +D+   G RV    
Sbjct: 122 ATEYIPQMVAMIEDLISKGHAYAAEGHVLFAVDSWKDRYGRLSGRSVDDMIAGARVEVAP 181

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 182 YKKNPMDFVLWKPSTDDLPGWDSPWGRGRPGWHIECSAMSYELLGETFDIHGGGNDLMFP 241

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      A  W+HN  L +EG+KMSKS GNF T+ +LL+      + +P
Sbjct: 242 HHENEIAQSCCAHPEGDFARFWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGYP 295

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLSALYN 357
             VIRL  L THYR+P+D+T ++  EAE  L KW   +     I+P      AVL AL +
Sbjct: 296 GEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTAG---IEPASSAAAAVLEALAD 352

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK-------NISIAIE 410
           DLN+  AI  LHKLA +      L     ASA +LG+    E +         ++S   E
Sbjct: 353 DLNSAGAIAELHKLAADGDAAGLL-----ASAQMLGL--LTEEMGAWASAPSIDLSAFAE 405

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGF 440
           KL + R   ++ K FS  D ++      G 
Sbjct: 406 KLFKTRQKAMESKDFSEVDKLKAAYVEAGL 435


>gi|114765791|ref|ZP_01444886.1| cysteinyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541898|gb|EAU44934.1| cysteinyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 461

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/447 (47%), Positives = 270/447 (60%), Gaps = 20/447 (4%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I + N+  RK   F+ IDP N+R+YVCGPTVYD AH+GNARP IVFDVL+RL+R  
Sbjct: 1   MDVPIWLTNSRTRKKELFEPIDPDNVRIYVCGPTVYDRAHLGNARPAIVFDVLFRLMRQV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG + VTYVRN TD+DDKI  RA+    SI        IT++ TQ ++ D   +  + PT
Sbjct: 61  YGPEHVTYVRNFTDVDDKINARAQASGRSI------GEITAETTQWYLDDMAAVGVMEPT 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H PRAT  I QMI +I ++I  GHAYEA   ++F   S   YG  S R +D+   G RV 
Sbjct: 115 HMPRATEFIDQMIAMIADLIEKGHAYEAEGHVLFAVESYKAYGGLSGRSVDDMIAGARVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K+NP DF+LWK S P  PGWESPWGRGRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 175 VAPYKRNPMDFVLWKPSEPELPGWESPWGRGRPGWHIECSAMSYELLGASFDIHGGGNDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA      A +W+HN  L +EG+KMSKS GNF T+++LLE +  G  
Sbjct: 235 MFPHHENEIAQSCCAHPEGGFAKVWLHNEMLQVEGKKMSKSLGNFFTVHDLLEGRD-GQA 293

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYN 357
             P  VIR  ML THYR+P+D+T ++ ++AE  L KW    T      +    V++AL +
Sbjct: 294 GVPGEVIRFVMLSTHYRKPMDWTAEKASQAEATLKKWYAQITEALDNEVPYVGVVNALAD 353

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL-----GIEVCKEHLNKNISIAIEKL 412
           DLNT  AI  +H+L+          P   AS  +L     GI       + ++S   +KL
Sbjct: 354 DLNTAKAIAEMHQLSLAGDT-----PSLRASLKLLGFLDHGIPDWARGPDFDLSELADKL 408

Query: 413 VQERLILLKMKKFSSADYIRKQLESKG 439
              R   ++ K FS  D ++  L   G
Sbjct: 409 AAVRGAAMESKDFSEVDRMKAALLEAG 435


>gi|149204784|ref|ZP_01881747.1| cysteinyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149141753|gb|EDM29806.1| cysteinyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 467

 Score =  404 bits (1037), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 211/452 (46%), Positives = 278/452 (61%), Gaps = 32/452 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R+  EF  +D  N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4   IKLHNTRTRRKEEFTPLDKDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGAE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +   SI        IT++ TQ F+ D   L  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAESGRSI------GEITAETTQWFLDDMAALGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+ +I  GHAYEA   ++F   S    YG  S R +D+   G RV    
Sbjct: 118 ATQYIPQMVAMIEGLIAKGHAYEAEGHVLFAVDSWREGYGKLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 178 YKRNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAHELLGESFDIHGGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    + A +W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 238 HHENEIAQSCCAHPEGEFAKVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAVLSALYNDLNT 361
             VIR   L THYR+P+D+T ++  EAE  L KW         G +    L+ LY+DLNT
Sbjct: 292 GEVIRFVFLSTHYRKPMDWTAEKAEEAEKTLRKWRGLVQGAETGQVQEIELAPLYDDLNT 351

Query: 362 VSAIQALHKLARE-----STKNHDLLP-IFNASAHILGI------EVCKEHLN--KNISI 407
              IQ L  +AR       T    + P  F A+A +LG+      +   +H +   ++S+
Sbjct: 352 HGVIQRLRAMARAIELGIDTPEGTVTPGDFLATARMLGLLEDGMGDWIAQHADDLSDLSL 411

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            ++K   ER+   + K F+  D ++  L   G
Sbjct: 412 TLDK---ERMKAKQTKDFTIVDALKSALTDAG 440


>gi|163793631|ref|ZP_02187606.1| cysteinyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159181433|gb|EDP65948.1| cysteinyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 463

 Score =  403 bits (1035), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/479 (45%), Positives = 288/479 (60%), Gaps = 42/479 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++KI NTL R    F+ IDPS++RMYVCGPTVYDFAH+GNARP++VFDVL RLLR  Y
Sbjct: 4   QPELKITNTLTRAKEAFRPIDPSHVRMYVCGPTVYDFAHVGNARPVVVFDVLVRLLRRLY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYVRNITD++DKI  RA++        + I  +T++   Q+  D   L    P  
Sbjct: 64  PR--VTYVRNITDVEDKINARAKEN------GEPIEALTARTAAQYQADMDALGAERPDV 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPRAT+HI QMI LI+ +I  GHAY A+  ++F   S+P+YG  SRR  D+   G RV  
Sbjct: 116 QPRATHHIAQMITLIERLIAKGHAYAADGHVLFAVPSMPDYGGLSRRDRDDMIAGARVEV 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++PADF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGGLDLI
Sbjct: 176 APYKQDPADFVLWKPSSDDIPGWDSPWGRGRPGWHIECSAMSWEHLGETFDIHGGGLDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA      AN W+HNGF+ +EG KMSKS GNF T++++L       + 
Sbjct: 236 FPHHENEIAQSRCAFGTHTMANYWMHNGFVTVEGEKMSKSLGNFYTVHDVL-------KE 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDP------AVLS 353
           WP   IRL +L +HYR P+DFT   L EA+  L +  Q   + +   ++P       +++
Sbjct: 289 WPGEAIRLLLLSSHYRAPLDFTSAGLKEAKAQLDRLYQALRNAADVAVEPEAPAGDELMA 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS------- 406
           AL +DLN   A+  LH+      K  D      A + +LG       L  +         
Sbjct: 349 ALLDDLNVPLAVARLHEAVGRLNKATDPAERSAAKSALLGGGALLGLLQADPEAWFQGGG 408

Query: 407 ------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                   IE+L+Q R+   K + F+ AD IR  L++ G  LED      G + T WK+
Sbjct: 409 DDDLDPAEIERLIQARVDARKGRDFAEADRIRDALKANGVELED------GPQGTTWKR 461


>gi|209964298|ref|YP_002297213.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
 gi|226710848|sp|B6ISG4|SYC_RHOCS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|209957764|gb|ACI98400.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
          Length = 456

 Score =  402 bits (1033), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 215/474 (45%), Positives = 285/474 (60%), Gaps = 40/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R    F  IDPSN+R+YVCGPTVYD+AH+GNAR    FD+L RLL++ Y   
Sbjct: 3   LTLYNTLTRSEEAFTPIDPSNVRLYVCGPTVYDYAHVGNARTFSAFDLLARLLKHLYPR- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKII+R+++        + I  +T++ T QF  D   L  L P  +PR
Sbjct: 62  -VTYARNITDVDDKIIDRSQRS------GEPIDGVTARTTAQFHADMDALGLLRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIPQMI +I  ++  G AY A   ++F   ++P+YG  SRR  DE   G RV    +
Sbjct: 115 ATTHIPQMIAMIGRLVEQGFAYAAEGHVLFHVPAMPDYGRLSRRSQDELIAGARVEVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF+LWK + P EPGW+SPWG GRPGWHIECSAM++ +LG VFDIHGGGLDLIFPH
Sbjct: 175 KRSPADFVLWKPAKPGEPGWDSPWGTGRPGWHIECSAMTAAHLGAVFDIHGGGLDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN+W+H+GFL + G KMSKS GNF T+ ELL+        +P 
Sbjct: 235 HENEIAQSRCAHGTAVMANVWMHSGFLTIAGDKMSKSLGNFYTVRELLD-------EFPG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSALYNDL 359
             IRLA+L  HYR+P+DFT +++ +A+  L +W         +  A     VL+AL +DL
Sbjct: 288 EAIRLALLSAHYRQPLDFTKEKIAQAKQALDRWYGVLRGLEEVRAAEVPFDVLAALEDDL 347

Query: 360 NTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILG-IEVCKEHLNKNISIAIEKL- 412
           NT  AI  LH+LA      ++     L     A+A +LG +    +   +      + L 
Sbjct: 348 NTPLAISHLHELATAFHKADAAARPGLAGRLKAAAGLLGFLRQDPDAWFRGTPKGTDGLD 407

Query: 413 -------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  +Q R    K K F+ AD IR  L  +G +LED      G + T WK+
Sbjct: 408 EAAIEAAIQARKEARKAKDFAEADRIRAALLEQGIVLED------GPQGTSWKR 455


>gi|83953795|ref|ZP_00962516.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841740|gb|EAP80909.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 486

 Score =  398 bits (1023), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 211/469 (44%), Positives = 282/469 (60%), Gaps = 45/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK  +F  ID  N+RMYVCGPTVYD AH+GNARP+IVFDVL RLLR+ YG+ 
Sbjct: 4   IKLHNTKTRKREDFTPIDDKNVRMYVCGPTVYDRAHLGNARPVIVFDVLNRLLRHVYGDA 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +   SI        IT++ TQ F+ D   +  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAESGRSI------GEITAETTQWFLDDMAEVGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IPQM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATAYIPQMVAMIEDLIAKGHAYAAEGHVLFSVESYKAYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--------------- 229
           K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K               
Sbjct: 178 KRNPMDFVLWKPSDDATPGWDSPWGRGRPGWHIECSAMADELLWKEPLRQDRLSDEAKSA 237

Query: 230 --VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
             VFDIHGGGLDL FPHHE+EIAQSCCA+  ++ A  W+HN  L +EG+KMSKS GNF T
Sbjct: 238 PHVFDIHGGGLDLQFPHHEDEIAQSCCANGTDEMARYWLHNEMLQVEGKKMSKSLGNFFT 297

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKW 337
           + +LL+      +  P  VIR  ML THYR+P+D+TV++  EAE  L           ++
Sbjct: 298 VRDLLD------QGVPGEVIRFVMLSTHYRKPMDWTVEKQVEAEATLFGYISTLESYEEF 351

Query: 338 PQTSTSKGIIDPA--VLSALYNDLNTVSAIQALHKLA---RESTKNHDLLPIFNASAHIL 392
           P +      +DP+  ++SAL  DL+T  A+  L  L    + S    DL+ +   S   L
Sbjct: 352 PVSLEKARELDPSPEIISALARDLDTYGALGVLKTLRDRNKASQLARDLVFLGFYSWSGL 411

Query: 393 GIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             +V  +  + +++S    KL + R +  + K F+  D+++ QL+  GF
Sbjct: 412 ETKVAERSDIKRDLSKLASKLEEVRTVAKETKDFTELDHLKTQLDLAGF 460


>gi|262277058|ref|ZP_06054851.1| cysteinyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224161|gb|EEY74620.1| cysteinyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 448

 Score =  397 bits (1020), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 218/450 (48%), Positives = 283/450 (62%), Gaps = 24/450 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL R   +F  ID  NIRMYVCGPTVYD+ H+GNARP+IVFD+L+RLL   Y   
Sbjct: 3   LKISNTLTRSKEKFIPIDEKNIRMYVCGPTVYDYPHVGNARPLIVFDLLFRLLSKIYSTS 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKIIE + +    I I D    +TSK T+ F  D   L CL PT +P+
Sbjct: 63  KVTYVRNITDIDDKIIEASNK--SKISIQD----LTSKVTKDFHDDCNYLGCLNPTIEPK 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ +MI LI+ +I +  AYE+N  + F  +    YG+ S +KI+E   G+RV    +
Sbjct: 117 ATEHLNEMINLIKKLIQNDFAYESNGHVYFQVTKFKKYGNLSNKKIEELISGSRVEVSDN 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK S   EP W+SP+G+GRPGWH+ECSAMS  YLG  FDIHGGGLDLIFPH
Sbjct: 177 KKEPGDFVLWKPSKENEPSWDSPFGKGRPGWHLECSAMSEKYLGNHFDIHGGGLDLIFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA+  EK +N W+HNG++ +E +KMSKS GNFITINEL   K + G+    
Sbjct: 237 HENEIAQSTCANNNEKFSNYWLHNGYVTVEKQKMSKSLGNFITINEL--KKNYNGQ---- 290

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVLSALYNDLNTVS 363
            V+RLAML THY +P D+  + L  ++  L KW +  S  K  I    L  L +DLNT  
Sbjct: 291 -VVRLAMLSTHYTQPFDWNEKILDVSQKSLDKWYEFYSDEKEEISEENLKFLLDDLNTPL 349

Query: 364 AIQALHKLARESTKNHDL-LPIFNASAHILGIEVCKEH--------LNKNISIAIEKLVQ 414
            I  +H+L +++     L     ++S  ILG+   + H        + K  +  IEKL+ 
Sbjct: 350 MISNIHELYKKAKTGDSLSAKQLSSSCKILGL-FNQTHDEWKNFKKIGKITAEEIEKLIS 408

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILED 444
           ER      K F ++D IR  L SKG +++D
Sbjct: 409 ERNKARSKKDFKTSDEIRDLLVSKGVLIKD 438


>gi|159044247|ref|YP_001533041.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|187629812|sp|A8LLR2|SYC_DINSH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157912007|gb|ABV93440.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 458

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/444 (45%), Positives = 272/444 (61%), Gaps = 25/444 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+ NT  R+   F  IDP N+RMYVCGPTVYD AH+GNARP +VFD+L+R+LR  YG 
Sbjct: 5   ELKLTNTKTRRKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPAVVFDMLFRVLREVYGP 64

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRNITD+DDKI  RA +         +I  IT + T  +++D   L  L PTH P
Sbjct: 65  EHVTYVRNITDVDDKINARAAE------TGRSIREITDETTGWYLEDMAALGTLPPTHVP 118

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT +IPQM+ +I+ +I  GHAY A   ++FD  S   YG+ S R +D+   G RV    
Sbjct: 119 RATEYIPQMVAMIETLIARGHAYVAEGHVLFDVRSYGAYGALSGRSVDDMIAGARVEVAP 178

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL FP
Sbjct: 179 YKRDPMDFVLWKPSEAGLPGWDSPWGRGRPGWHIECSAMSHELLGESFDIHGGGNDLQFP 238

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      A +W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 239 HHENEIAQSCCAHPEGGFAKVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 292

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYNDLN 360
             VIR   L THY +P+D+T ++  EA  +L KW              P+V++AL +DLN
Sbjct: 293 GEVIRFVFLGTHYSKPMDWTERKRDEAMAVLRKWRAAVAGTRPAPAAAPSVMAALVDDLN 352

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGI---EVCKEHLNKNISIA--IEKLVQE 415
           T  AI  LH+L R+       LP   ASA ++G+   E+     +  + ++    +L + 
Sbjct: 353 TPGAIAELHQLYRDGN-----LPGLLASAQLMGLLSDEMGGWDSSPQVDLSELAARLAEV 407

Query: 416 RLILLKMKKFSSADYIRKQLESKG 439
           R   +  K F+  D ++  L + G
Sbjct: 408 REAAIGTKDFTQVDRMKAALIAAG 431


>gi|99080994|ref|YP_613148.1| cysteinyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123378967|sp|Q1GHI0|SYC_SILST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|99037274|gb|ABF63886.1| cysteinyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 457

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 209/445 (46%), Positives = 273/445 (61%), Gaps = 26/445 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+  RK   F  IDP N++MYVCGPTVYD AH+GNARP++VFDVL+RLLR+ YG+K
Sbjct: 4   IKLHNSKTRKKEVFTPIDPDNVQMYVCGPTVYDRAHLGNARPVVVFDVLFRLLRHVYGDK 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RN TD+DDKI  RA +         AI  ITS+  Q F++D   L  L PTH PR
Sbjct: 64  KVTYARNFTDVDDKINTRAAES------GRAIGEITSETIQWFLEDMGALGALQPTHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQMI +I+ +I   HAYEA   ++F   S    YG  S R +D+   G RV    
Sbjct: 118 ATEYIPQMIAMIEELIARDHAYEAEGHVLFAVDSWREGYGQLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK S   +PGWESPWGRGRPGWHIECSAMS   LG+ FDIH GG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSDADQPGWESPWGRGRPGWHIECSAMSHDLLGESFDIHCGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   + A  W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 238 HHENEIAQSCCANPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLSALYN 357
             V+R   L THYR+P+D+T ++  EAE  L KW   +     I+P      AV+ AL +
Sbjct: 292 GEVVRFVFLQTHYRKPMDWTEKKAAEAEATLRKWRALTAG---IEPAATAAAAVVDALSD 348

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE--KLVQE 415
           DLNT  AI  +HKLA  +  +   L        +LG E+ +     ++ ++    +L + 
Sbjct: 349 DLNTAGAIAEMHKLA--AAGDGAGLLAAGQLVGLLGDEMGEWAAAPSVDLSAHEARLFKA 406

Query: 416 RLILLKMKKFSSADYIRKQLESKGF 440
           R   ++ K FS  D ++      G 
Sbjct: 407 RQAAMETKDFSEVDRLKAAYTEAGL 431


>gi|298290922|ref|YP_003692861.1| cysteinyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927433|gb|ADH88242.1| cysteinyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 464

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 216/457 (47%), Positives = 283/457 (61%), Gaps = 25/457 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R    F  ++PS +RMYVCGPTVYDFAHIGNARP+IVFD+LYRLLR+ YG 
Sbjct: 11  ELKLYNTLTRAKETFVPLEPSQVRMYVCGPTVYDFAHIGNARPVIVFDLLYRLLRHLYGA 70

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V YVRNITD+DDKI  RA  E P + +N+AI+ +T     QF  D   L  L P  +P
Sbjct: 71  EHVKYVRNITDVDDKINARAASEFPGLDLNEAIAKVTFTTEAQFHDDLEALGVLHPDVEP 130

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +M  LI+ ++  GHAY A + ++F   S+P+YG  S R +++   G RV    
Sbjct: 131 RATEHIAEMRVLIERLVASGHAYVAEDHVLFSVPSMPDYGQLSHRPLEDMIAGARVDVAP 190

Query: 184 HKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +K++  DF+LWK S P EPGW SP G    GRPGWHIECSAMS  +LG+ FDIHGGG+DL
Sbjct: 191 YKQDAMDFVLWKPSKPGEPGWLSPAGIAVPGRPGWHIECSAMSWKHLGETFDIHGGGIDL 250

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE+AQS CA      A +W+HNGFL +EG KMSKS GNF+TI +LL        
Sbjct: 251 VFPHHENEVAQSRCAFHANIMAKVWMHNGFLQVEGEKMSKSLGNFVTIRDLLA------- 303

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--AVLSALYND 358
            WP  V+RL ML THYR+PID+TV+ L E+   L +W   +       P  AVL AL +D
Sbjct: 304 DWPGEVLRLNMLKTHYRQPIDWTVKGLEESAKTLEQWFDAAAPDAYPRPAAAVLEALADD 363

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------VCKEHLNKNISIA-IE 410
           LNT  AI  +H L     K+H        +   LG E          +     I  A IE
Sbjct: 364 LNTPKAIAEMHAL-----KDHAGKKALAGTLAFLGFEPGPFREWAAAQAPELTIPEAEIE 418

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             + ER+   + + ++++D IR +L + G  L+D K+
Sbjct: 419 ARIAERIEARRNRDWAASDRIRDELMALGVALKDNKD 455


>gi|294084247|ref|YP_003551005.1| cysteine--tRNA ligase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663820|gb|ADE38921.1| Cysteine--tRNA ligase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 465

 Score =  394 bits (1013), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 203/467 (43%), Positives = 277/467 (59%), Gaps = 42/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  +DP++I +Y CGPTVYD  H+GNARP++VFDVL RLLR  YG  
Sbjct: 4   LKLYNTLTRQKDEFVPLDPAHIGIYACGPTVYDRIHVGNARPIVVFDVLVRLLRRQYG-- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII RA +       N +I+ + +   + F  DT  L   AP  +PR
Sbjct: 62  TVTYVRNITDVDDKIIARADER------NMSIATLCADTIKSFHADTESLLTKAPDAEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  M+ +I+ +I +G AYEA   ++F    +P YG  SRR +D+   G RV    +
Sbjct: 116 ATKHIDGMVAMIKTLIANGFAYEAEGHVLFHVKQMPTYGGLSRRSMDDMIAGARVEVAPY 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++ +DFILWK S+  +PGW+SPWGRGRPGWHIECSAMS  YLG+VFDIH GGLDLIFPH
Sbjct: 176 KRDASDFILWKPSSQAQPGWDSPWGRGRPGWHIECSAMSKFYLGEVFDIHAGGLDLIFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSCCA   +K AN W+HNGF+ +EG  MSKS G+F+T+ + +   +        
Sbjct: 236 HENEIAQSCCAHNTDKMANYWLHNGFVTVEGETMSKSTGHFVTVADAVAKHR-------G 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLSALYNDLN 360
            V+R  +L  HYR P+DF+     +A   L +        +  +  +D A L  L +DLN
Sbjct: 289 EVVRYILLSAHYRAPLDFSDHAAFDARNSLDRLYRAVGDVAADETKVDAAFLDCLCDDLN 348

Query: 361 TVSAIQALHKLARESTKNHDLLPI-FNASAHILGI--------------EVCKEHLNKNI 405
           T +A+  LH+LAR + K      I   +SA ++G+              ++      +  
Sbjct: 349 TPAAMARLHELARLANKGDAAAAIALKSSAEVMGLLGQTGDAWGKGEIKDLSSSMTREPT 408

Query: 406 SIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           S A        I+  +  R +    + F+ AD IR +L + G  LED
Sbjct: 409 SSAQLEVDNSDIDAKIAARNVARNRRDFAEADRIRDELAADGIHLED 455


>gi|220921630|ref|YP_002496931.1| cysteinyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219946236|gb|ACL56628.1| cysteinyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 460

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/465 (44%), Positives = 279/465 (60%), Gaps = 32/465 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R    F  ID  N+RMY CGPTVYD AHIGN RP+IVFD+L+RLLR+ 
Sbjct: 1   MAPLLRLYNTLTRAKEPFAPIDAGNVRMYACGPTVYDAAHIGNGRPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTYVRN+TD+DDKI  RA +   SI        +T +    F  D  RL  L P 
Sbjct: 61  YGEGAVTYVRNVTDVDDKINARAAERGISI------RALTDETLAAFHADLRRLGVLMPE 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT HI +M  +I+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGQRPVFIEPRATEHIREMAMMIERLVAAGHAYVAEEHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S P EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMEAGARVDVAPYKRSPLDFVLWKPSKPNEPAWPSPCGIAAPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GG+DL+FPHHENE+AQS C       AN+W+HNGFL +EG KMSKS GNF+
Sbjct: 235 LGETFDIHAGGIDLVFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGDKMSKSLGNFV 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           T+ E+L         WP  V+RLAML THYR+PID+T++ L EA   + +W +T    G 
Sbjct: 295 TLREVLA-------DWPGEVVRLAMLRTHYRQPIDWTLRALEEASRTIDRWYETVGDTGP 347

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHILGIEVCKEHLN 402
              +  A+  AL +DLNT SA+  LH+L   +  K   +L  F  S      +       
Sbjct: 348 AAEVPAALRDALLDDLNTPSALGELHRLDDPAALKAGAMLMGFLGSTRSARAQAAVAASG 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +++  +E+L+ ER      + ++ +D +R  L + G  L+D K+
Sbjct: 408 VDVA-TVERLIAERKAARAARNWAESDRLRDALAAMGVTLKDNKD 451


>gi|170738802|ref|YP_001767457.1| cysteinyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168193076|gb|ACA15023.1| cysteinyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 460

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/472 (43%), Positives = 276/472 (58%), Gaps = 46/472 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R    F  IDPS +RMY CGPTVYD AHIGN RP+IVFD+L+RLLR+ 
Sbjct: 1   MAPLLRLYNTLTRAKEPFAPIDPSRVRMYACGPTVYDAAHIGNGRPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTYVRN+TD+DDKI  RA +   SI        +T +    F  D  RL  L P 
Sbjct: 61  YGADAVTYVRNVTDVDDKINARAAERGVSI------RTLTDETLAGFHADLRRLGVLMPE 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  +I+ ++  GHAY A + ++FD  S+P+YG+ SRR 
Sbjct: 115 DVNRPGARPAFIEPRATDHIAEMAQMIERLVAAGHAYLAEDHVLFDVPSMPDYGALSRRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S P EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMEAGARVDVAPYKRSPLDFVLWKPSKPGEPAWPSPCGIAAPGRPGWHIECSAMSWRH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GG+DL+FPHHENE+AQS C       AN+W+HNGFL +EG KMSKS GNF+
Sbjct: 235 LGETFDIHAGGIDLVFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGDKMSKSLGNFV 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG- 345
           T+ E+L         WP   +RLAML THYR+PID+T++ L EA   L +W ++    G 
Sbjct: 295 TLREVLA-------DWPGEAVRLAMLRTHYRQPIDWTLRALEEASRTLERWYESVGDLGP 347

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-------EV 396
              +   V  AL +DLNT +A+  LH+L   +           A A ++G+         
Sbjct: 348 APAVPEGVRDALLDDLNTPAALGELHRLEDPAA--------LKAGAGLMGLLGATRSARA 399

Query: 397 CKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                   I + A+E L+  R      K ++ +D +R  L   G  ++D K+
Sbjct: 400 EAAVAASGIDVAAVEGLIAARKAARAAKNWAESDRLRGALAGMGVTVKDNKD 451


>gi|330814242|ref|YP_004358481.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487337|gb|AEA81742.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 430

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 209/447 (46%), Positives = 277/447 (61%), Gaps = 34/447 (7%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           +N+R+YVCGPTVYD+ H+GNARP+IVFD+L+RLL   +G++ V YVRNITD+DDKI+E A
Sbjct: 4   NNVRVYVCGPTVYDYPHVGNARPLIVFDLLFRLLNKIFGKEKVQYVRNITDVDDKILESA 63

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           + +      N +I  +T +  + F  D + L CL PT +P+AT+HI +MI L   +I   
Sbjct: 64  KSK------NISIQDLTKEVIKDFQDDCSYLNCLTPTKEPKATDHIQEMIELTTKLIEKK 117

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
            AY     + F+ S   +YGS S +KIDE   G+RV     KK+P DF+LWK S   EPG
Sbjct: 118 FAYIEKGHVYFEVSKYKDYGSLSNKKIDELISGSRVEISKSKKSPVDFVLWKPSLEDEPG 177

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W+SPWG+GRPGWH+ECSAMS  YLGK FDIHGGGLDLIFPHHENEIAQS CA+     A 
Sbjct: 178 WDSPWGKGRPGWHLECSAMSEKYLGKEFDIHGGGLDLIFPHHENEIAQSTCANETNLLAK 237

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNG++ +   KMSKS+GNFITINEL    KF G+     VIRLAML THY +P D+ 
Sbjct: 238 FWMHNGYVTVNKEKMSKSDGNFITINEL--KGKFDGQ-----VIRLAMLSTHYTQPFDWN 290

Query: 324 VQRLTEAEILLSKWPQ-TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--- 379
            Q L  +   L+KW    S     IDP++L +L +DLNT   I  LHKL +E+   +   
Sbjct: 291 NQILENSYKSLNKWYDFYSDENETIDPSLLDSLKDDLNTPLFISQLHKLHQEAMDGNTKS 350

Query: 380 --------DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                     + +FN +A     +  K+ L+++    +  L+QER +    K F  +D I
Sbjct: 351 GKKLSTACKFIGLFNVNAEGWKDQKSKKSLSED---EVNILIQERNLARDNKDFKRSDEI 407

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWK 458
           R  L  KG ++ED +N       T WK
Sbjct: 408 RDLLNDKGILIEDKENS------TTWK 428


>gi|83310335|ref|YP_420599.1| cysteinyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|109894907|sp|Q2W7Y5|SYC_MAGMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|82945176|dbj|BAE50040.1| Cysteinyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 459

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 220/476 (46%), Positives = 277/476 (58%), Gaps = 45/476 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R    F+ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL+  Y    V
Sbjct: 5   LYNTLTRTKDVFEPLVPGHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLKTLY--PSV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITD+DDKI  RA++        + IS IT + T  F +D   L CL P  +PRAT
Sbjct: 63  RYVRNITDVDDKINARAKES------GEPISAITERTTAMFHEDIGALNCLLPDVEPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HI QMI +I+ +I  G AY A   ++F   ++ +YG+ SRR  DE   G RV    +KK
Sbjct: 117 AHITQMIAMIERLIAKGFAYAAEGHVLFAVGAMADYGALSRRSSDEMIAGARVEVAPYKK 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGG DL+FPHHE
Sbjct: 177 DPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSLQHLGETFDIHGGGQDLVFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS CA+  +  A  W+HNG+L +EG KMSKS GNF T+ +LL+         P   
Sbjct: 237 NEIAQSTCANG-KPFARFWLHNGWLMVEGEKMSKSLGNFFTVRDLLDQA-------PGEA 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLSALYN 357
           IRLAML THY +P D+T   L +A+  L +          ID           VL+AL +
Sbjct: 289 IRLAMLTTHYHQPFDWTADGLKQAKATLDRLYTALRGVADIDANGYEGEAPLEVLAALKD 348

Query: 358 DLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIEVCK-EHLNKNISIA-- 408
           DLNT  AI  LH+LA    K   L           AS H+LG+     E   K    A  
Sbjct: 349 DLNTPLAISHLHELAGALNKATGLEDKARRKGALLASGHLLGLLYQDPEAWFKGTGAADG 408

Query: 409 -----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                IE  +  R    K + F+ AD IR+ L ++G +LED      G   T WK+
Sbjct: 409 PSDAEIEAAITARAEARKSRNFAEADRIRQDLAARGVVLED------GAGGTTWKR 458


>gi|240141599|ref|YP_002966079.1| cysteine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240011576|gb|ACS42802.1| cysteine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 462

 Score =  394 bits (1011), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 207/472 (43%), Positives = 285/472 (60%), Gaps = 44/472 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA +    I I +    +T     QF +D   L  L   
Sbjct: 61  YGAAHVTYARNVTDVDDKINARALER--GITIRE----LTDGTLAQFHRDIRDLGVLMAG 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ +++ GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVVAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W + +     
Sbjct: 295 TIRQVLD-------DWPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V+ AL +DLNT +A+  LH+LA  S           A A ++G     +   +
Sbjct: 348 DAEVPEGVVEALCDDLNTPAALGELHRLAGTSPS------ALKAGAGLMGFLAVTQAQRE 401

Query: 404 -------NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                   I +A +E L+ ER      K ++++D +R  L + G  ++D K+
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARVAKDWAASDRVRDALTALGVSVKDNKD 453


>gi|126737778|ref|ZP_01753508.1| cysteinyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126721171|gb|EBA17875.1| cysteinyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 466

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 206/448 (45%), Positives = 269/448 (60%), Gaps = 23/448 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK +EF  ID  N+RMYVCGPTVYD AH+GNARP++VFD LYRLLR+ YG  
Sbjct: 4   IKLHNTKTRKKSEFTPIDAKNVRMYVCGPTVYDRAHLGNARPVVVFDTLYRLLRHVYGAD 63

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A   ++      + + +   +++    ++KD   L  + P H
Sbjct: 64  HVTYVRNFTDVDDKINATAVARKEAGAEGTLEELVHARSNETIDWYLKDMGALGAMQPDH 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNY-GSFSRRKIDEQKMGTRVP 180
            PRAT +I  M+ +I ++I  GHAY A   ++F   S   Y G  S R +D+   G RV 
Sbjct: 124 MPRATEYIAPMVDMISDLISKGHAYAAEGHVLFAVDSWKEYYGRLSGRSVDDMIAGARVE 183

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKNP DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 184 VAPYKKNPMDFVLWKPSGDDLPGWDSPWGRGRPGWHIECSAMSYELLGDTFDIHGGGNDL 243

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA+  +  A  W+HN  L +EG+KMSKS GNF T+ +LLE      +
Sbjct: 244 MFPHHENEIAQSCCANGDDSFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------Q 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDPA--VLSALYN 357
            +P  VIRL  L THYR+P+D+T ++  EAE  L KW   T   +    PA  VL A+ +
Sbjct: 298 GYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTDGVEPSAAPASSVLDAIAD 357

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
           DLNT  A+  LHKLAR       L     AS  ++G+   +     E    ++S   +KL
Sbjct: 358 DLNTAGAVAELHKLARAGDAAGLL-----ASGQLMGLLTNERGEWAETPKVDLSEYEDKL 412

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGF 440
            + R   ++ K FS  D ++      G 
Sbjct: 413 AKARETAMESKDFSEVDRLKTAYIDAGL 440


>gi|254486794|ref|ZP_05099999.1| cysteinyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043663|gb|EEB84301.1| cysteinyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 481

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 216/468 (46%), Positives = 269/468 (57%), Gaps = 50/468 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK  +F  ID  N+RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG  
Sbjct: 4   IKLHNTKTRKREDFVPIDSDNVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHVYGPD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +   SI        IT++ TQ F+ D   +  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAESGRSI------GEITAETTQWFLDDMAAVGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IPQMI +I+ +I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATAYIPQMIEMIEGLIAKGHAYAAEGHVLFAVESYKEYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIHGGG DL+FPH
Sbjct: 178 KRNPMDFVLWKPSDGDTPGWDSPWGRGRPGWHIECSAMSYELLGAHFDIHGGGNDLMFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSCCA      AN W+HN  L +EG+KMSKS GNF T+ +LL+         P 
Sbjct: 238 HENEIAQSCCAHPGAGFANYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------HGVPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALYN 357
            VIR  ML THYR+P+D+T ++  EA+  L  W         +  S+ IID      L  
Sbjct: 292 EVIRYVMLSTHYRKPMDWTEKKADEAKRKLKSWYDLVKGVEASKASRIIID-----NLAE 346

Query: 358 DLNTVSAIQALHKLARESTKN---------------------HDLLPIFNASAHILGI-- 394
           DLNT   ++ L +LA +   N                      +L   F AS  +LG+  
Sbjct: 347 DLNTAFTLRQLDQLAGDIVHNDKFDGQFEAGVPNAPQMARSSSELRSEFKASLQLLGLIG 406

Query: 395 -EV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            EV    E    ++S     L   R + ++ K FS  D I+  L   G
Sbjct: 407 DEVPSWSEETAFDLSRFQRSLEAARSVAMQTKDFSGVDQIKNMLIGAG 454


>gi|260433631|ref|ZP_05787602.1| cysteinyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417459|gb|EEX10718.1| cysteinyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 466

 Score =  390 bits (1002), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/450 (46%), Positives = 270/450 (60%), Gaps = 27/450 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R   EF  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4   IKLHNTRTRTKEEFVPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPE 63

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A   +Q      +   +   + +    ++ D   L  L P  
Sbjct: 64  HVTYVRNFTDVDDKINATALARKQAGAEGTLEQLVQERSDETIGWYLHDMGALGALEPDQ 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVP 180
            PRAT +I QMI +I+++I  GHAYEA   ++F   S  + YG  S R +D+   G RV 
Sbjct: 124 MPRATRYIDQMIAMIEDLIAKGHAYEAEGHVLFAVDSWRDEYGRLSGRSVDDMIAGARVE 183

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKNP DF+LWK S    PGWESPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 184 VAPYKKNPMDFVLWKPSDDELPGWESPWGRGRPGWHIECSAMSYELLGESFDIHGGGNDL 243

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA    + A  W+HN  L +EG+KMSKS GNF T+++LL+      +
Sbjct: 244 MFPHHENEIAQSKCAHPHGEFARYWLHNEMLQVEGKKMSKSLGNFFTVHDLLD------Q 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----IDPAVLSAL 355
             P  VIR   L THYR+P+D+T ++  EAE+ L KW   + + GI       PAV+ AL
Sbjct: 298 GVPGEVIRFVFLQTHYRKPMDWTEKKAREAEVTLRKW--RALTAGIEPAASAAPAVIEAL 355

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-----EVCKEHLNKNISIAIE 410
            +DLNT  A+  LH LA        L     ASA +LG+         E    ++S   +
Sbjct: 356 ADDLNTAGALAELHHLASVGDAAALL-----ASARVLGLLEPDMGAWAETDGVDLSAHAD 410

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +L + R   ++ K FS  D ++    + G 
Sbjct: 411 RLARVRAEAMQTKDFSEVDRLKAAYLAAGL 440


>gi|84503361|ref|ZP_01001430.1| cysteinyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84388271|gb|EAQ01222.1| cysteinyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 477

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 208/466 (44%), Positives = 277/466 (59%), Gaps = 48/466 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ N+  R+   F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG 
Sbjct: 3   EIRLTNSKTRRKEVFAPIDPENVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRN TD+DDKI  RA ++        AI  IT +    + +D   L  L PTH+P
Sbjct: 63  EAVTYVRNFTDVDDKINARAERD------GRAIREITDETIGWYHQDMEALGTLRPTHEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+HIPQM+ +I+ +I  GHAY A   ++F   S  +YG+ S R +++   G RV    
Sbjct: 117 RATDHIPQMVAMIEGLIASGHAYAAEGHVLFSVDSYADYGALSGRSVEDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   LG  FDIHGGG+DL FP
Sbjct: 177 YKRNPMDFVLWKPSPGDLPGWDSPWGRGRPGWHIECSAMADELLGPSFDIHGGGIDLQFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      AN+W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 237 HHENEIAQSCCARPEGGFANVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----AVLSALYNDL 359
             VIR   L THYR  +D+T ++  +A+  L  W +  TS    DP    +V+  L NDL
Sbjct: 291 GEVIRFVFLGTHYRNNMDWTEEKSQQAKETLKAWFRL-TSGVESDPYGLTSVVPYLANDL 349

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE----------VCKE---------- 399
           NT   +  L  LA+     HD      A+   +G+E          V KE          
Sbjct: 350 NTPGVLHELRNLAQ-----HDAAGQLKAAMEFIGLEASGDWWVPGSVSKEIDGFVSHVSW 404

Query: 400 --HLNKNISIAIEK----LVQERLILLKMKKFSSADYIRKQLESKG 439
              L+ N+   + +    L++ R+  +K K FSS D ++  L + G
Sbjct: 405 SGDLDPNVESRLSEISAALLRARIQAMKTKDFSSVDEMKAYLVAAG 450


>gi|259419145|ref|ZP_05743062.1| cysteinyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345367|gb|EEW57221.1| cysteinyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 457

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 194/373 (52%), Positives = 244/373 (65%), Gaps = 22/373 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+  RK   F  I+P N++MYVCGPTVYD AH+GNARP++VFDVL+RLLR+ YG +
Sbjct: 4   IKLHNSKTRKKEVFIPINPDNVQMYVCGPTVYDRAHLGNARPVVVFDVLFRLLRHVYGAE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RN TD+DDKI  RA +          IS ITS+ TQ F+ D   L  L PTH PR
Sbjct: 64  HVTYARNFTDVDDKINARAAES------GREISEITSETTQWFLDDMGALGALEPTHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+++I  GHAY A   ++F   S    YG  S R +D+   G RV    
Sbjct: 118 ATQYIPQMVAMIEDLIARGHAYAAEGHVLFAVDSWREGYGQLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSDAAQPGWDSPWGRGRPGWHIECSAMSLDLLGESFDIHGGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   + A  W+HN  L +EG+KMSKS GNF T+ +LLE      +  P
Sbjct: 238 HHENEIAQSCCANPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLSALYN 357
             V+R   L T YR+P+D+T ++  EAE  L KW   +     I+P      AVL  L +
Sbjct: 292 GEVVRFVFLQTLYRKPMDWTEKKAAEAEATLRKWRALTAG---IEPAATAAAAVLDTLAD 348

Query: 358 DLNTVSAIQALHK 370
           DLNT  AI  +HK
Sbjct: 349 DLNTAGAIAEMHK 361


>gi|163743240|ref|ZP_02150621.1| cysteinyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383428|gb|EDQ07816.1| cysteinyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 496

 Score =  390 bits (1001), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 204/451 (45%), Positives = 273/451 (60%), Gaps = 31/451 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R       I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 35  IKLHNTRTRGKEVLNPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGTD 94

Query: 65  CVTYVRNITDIDDKI----IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            VTY RN TD+DDKI    + R     P   + + +   T +    ++ D   L  L P 
Sbjct: 95  HVTYARNFTDVDDKINATALARKEAGAPGT-LEELVQERTEETISWYLADMAELGALEPD 153

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PRAT +IPQMI +I+ +I  GHAY +    ++F   S  +YG+ S R +D+   G RV
Sbjct: 154 HMPRATAYIPQMIAMIEELIAKGHAYADGAGHVLFSVKSYKDYGALSGRSVDDMIAGARV 213

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS    G  FDIHGGG D
Sbjct: 214 EVADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGDSFDIHGGGND 273

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+ +LL+      
Sbjct: 274 LMFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------ 327

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLS 353
           + +P  VIRL  L THYR+P+D+T ++  EAE  L +W   +T    I+P      AV+ 
Sbjct: 328 QGYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRRWRALTTG---INPAPTASVAVID 384

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIA 408
           AL +DLNT  A+  LHKLA   T   DLL     SA +LG+   K     +  + ++S  
Sbjct: 385 ALSDDLNTAGALAELHKLASAETAA-DLL----TSARLLGLLTDKMGTWSQGEDHDLSHH 439

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            + L   R + ++ K F+  D ++  L + G
Sbjct: 440 EKSLFDARQVAIETKDFAEVDRLKTALIAAG 470


>gi|254510796|ref|ZP_05122863.1| cysteinyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534507|gb|EEE37495.1| cysteinyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 473

 Score =  389 bits (999), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 203/448 (45%), Positives = 265/448 (59%), Gaps = 23/448 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R    F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 12  IKLHNTRTRTKESFVPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPD 71

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            V Y RN TD+DDKI   A   +Q      +   +   + +    ++ D   L  L P  
Sbjct: 72  HVIYARNFTDVDDKINATALARKQAGADGTLEQLVQERSDETIGWYLHDMGALGALEPNA 131

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVP 180
            PRAT +I QMI +I+++I  GHAY A   ++F   S    YG  S R +D+   G RV 
Sbjct: 132 MPRATQYIAQMIAMIEDLIAKGHAYAAEGHVLFAVDSWREGYGKLSGRSVDDMIAGARVE 191

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKNP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 192 VAPYKKNPMDFVLWKPSSDELPGWDSPWGRGRPGWHIECSAMAYELLGESFDIHGGGNDL 251

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA    + A +W+HN  L +EG+KMSKS GNF T+++LLE      +
Sbjct: 252 MFPHHENEIAQSCCAHPEGEFARVWLHNEMLQVEGKKMSKSLGNFFTVHDLLE------Q 305

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYN 357
             P  VIR   L THYR+P+D+T ++  +AE  L KW   +          PAV+ AL +
Sbjct: 306 GIPGEVIRFVFLQTHYRKPMDWTEKKARDAEATLRKWRALTAGIEPAASAAPAVIVALGD 365

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-----EVCKEHLNKNISIAIEKL 412
           DLNT  AI  LH+LA E      L     ASA I+G+         E    ++S   E+L
Sbjct: 366 DLNTAGAIAELHRLAAEGDAAGLL-----ASARIIGLLSDDMGAWVEAGAVDLSSYAERL 420

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGF 440
              R+  ++ K F+  D ++    + G 
Sbjct: 421 AHARVAAMQSKDFAEVDRLKAAYIAAGL 448


>gi|83942575|ref|ZP_00955036.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846668|gb|EAP84544.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 487

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 212/477 (44%), Positives = 273/477 (57%), Gaps = 62/477 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK  +F  ID  N+RMYVCGPTVYD AH+GNARP+IVFDVL RLLR+ YG+ 
Sbjct: 4   IKLHNTKTRKREDFTPIDDKNVRMYVCGPTVYDRAHLGNARPVIVFDVLNRLLRHVYGDA 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA Q   SI        IT++ TQ F+ D   +  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAQSGRSI------GEITAETTQWFLDDMAAVGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IPQM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATAYIPQMVAMIEDLIAKGHAYAAEGHVLFSVESYKAYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--------------- 229
           K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K               
Sbjct: 178 KRNPMDFVLWKPSDDATPGWDSPWGRGRPGWHIECSAMADELLWKEPLRQDRLSDEAKSA 237

Query: 230 --VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
             VFDIHGGGLDL FPHHE+EIAQSCCA+  ++ A  W+HN  L +EG+KMSKS GNF T
Sbjct: 238 PHVFDIHGGGLDLQFPHHEDEIAQSCCANGTDEMARYWLHNEMLQVEGKKMSKSLGNFFT 297

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +LL+      +  P  VIR  ML THYR+P+D+T ++  EA   L+KW   +      
Sbjct: 298 VRDLLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKRDEATKTLTKWMDLTRDLEPC 351

Query: 348 DPA-------VLSALYNDLNTVSAIQALHKLARESTKNHD------------------LL 382
           DPA       ++ AL +DLNT  A+  L+ L  +  K  D                    
Sbjct: 352 DPAAFKPDQKLIDALADDLNTHLALTYLNALTAQPQKLLDHARWLGFLSDKSREDDAKAR 411

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             +  S    G EV  E  N        +L + R + +K K FS+ D ++  L + G
Sbjct: 412 AAYTTSFGSGGSEVETELAN--------RLDELRQMAMKTKDFSNVDALKSALLAAG 460


>gi|260428499|ref|ZP_05782478.1| cysteinyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260422991|gb|EEX16242.1| cysteinyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 474

 Score =  388 bits (996), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 192/385 (49%), Positives = 240/385 (62%), Gaps = 26/385 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I + N+  RK   F+ IDP ++R+YVCGPTVYD AH+GNARP IVFDVL+RL+R  YG  
Sbjct: 3   ISLTNSRTRKKEPFRPIDPEHVRIYVCGPTVYDRAHLGNARPAIVFDVLFRLMREVYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA++   SI        IT++ TQ ++ D   +  + PTH PR
Sbjct: 63  HVTYVRNFTDVDDKINARAKESGRSI------GEITAETTQWYLDDMAAVGVMEPTHMPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I QM+ +I  +I  GHAYEA   ++F   S   YG+ S R +D+   G RV    +
Sbjct: 117 ATQYIGQMVAMISELIEKGHAYEAEGHVLFAVESYTAYGALSGRSVDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--------------- 229
           K+NP DF+LWK S P  PGWESPWGRGRPGWHIECSAM+   L K               
Sbjct: 177 KRNPMDFVLWKPSEPDLPGWESPWGRGRPGWHIECSAMAEELLWKTPLEEGRLSEAALAH 236

Query: 230 --VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
             +FDIHGGG DL FPHHENEIAQSCCA+ +E  A  W+HN  L +EG+KMSKS GNF T
Sbjct: 237 PHLFDIHGGGNDLTFPHHENEIAQSCCANGVEHMAQTWLHNEMLQVEGKKMSKSLGNFFT 296

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           + +LL+    G    P  VIR  ML THYR+P+D+T ++  E E  L KW         G
Sbjct: 297 VRDLLDGHD-GLPGVPGEVIRFVMLSTHYRKPMDWTAEKAREGEATLRKWRAMVDGLEAG 355

Query: 346 IIDPAVLSALYNDLNTVSAIQALHK 370
            +   VL A+ +DLNT  AI  LHK
Sbjct: 356 PVPEGVLKAVADDLNTAGAIAELHK 380


>gi|114768989|ref|ZP_01446615.1| cysteinyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549906|gb|EAU52787.1| cysteinyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 455

 Score =  387 bits (994), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 205/452 (45%), Positives = 273/452 (60%), Gaps = 27/452 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN   R    F+ ID  N+RMYVCGPTVYD AHIGNARP++VFD+LYRLLR+ YG  
Sbjct: 3   IKLYNVKNRTKEAFKPIDERNVRMYVCGPTVYDRAHIGNARPVVVFDILYRLLRHTYGIN 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V+Y RN TD+DDKI  +A      I    +I  IT++    +++D T L  L P + PR
Sbjct: 63  SVSYARNFTDVDDKINIKA------ISTGKSIREITNETINWYIEDMTALGALEPDYAPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I +MI +   +I  GHAY A   ++FD SS   YG  S R ID+   G RV    +
Sbjct: 117 ATEYISEMIEMSSELIKKGHAYVAEGHVLFDVSSYEAYGELSGRSIDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S   +PGWESPWG GRPGWHIECSAM+    G+ FDIHGGGLDL FPH
Sbjct: 177 KRNPMDFVLWKPSNNDQPGWESPWGFGRPGWHIECSAMARALFGEKFDIHGGGLDLQFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSC     +  AN+W+HN  L +EG+KMSKS GNF ++ ELL+ K F G     
Sbjct: 237 HENEIAQSCACCGQDSFANVWLHNEMLQVEGKKMSKSLGNFFSVKELLD-KGFSGE---- 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLSALYNDLNT 361
            V+R   L THY +P+D+TV++  EAE+ L KW + +    +   I   V+ AL +DLNT
Sbjct: 292 -VVRFVYLSTHYSKPMDWTVKKAEEAELTLRKWRKLTNGVQVTKHISKGVIDALNDDLNT 350

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQE 415
             A+  LH LA+        +    +SA ILG+         KE+   ++S   E ++  
Sbjct: 351 SKALTVLHGLAKSGN-----IEELKSSAQILGLLSDQMGAWVKEN-TFDLSKLEEIILAS 404

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           R   +K K+F+  D ++    S G  ++  K+
Sbjct: 405 RDKAMKTKEFTELDNLKNLFISAGLDVQMSKD 436


>gi|85703328|ref|ZP_01034432.1| cysteinyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85672256|gb|EAQ27113.1| cysteinyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 472

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/453 (45%), Positives = 282/453 (62%), Gaps = 37/453 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R+   F+ +D  N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4   IKLHNTKTRRKEVFEPLDKDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT---- 120
            VTYVRN TD+DDKI  RA +   SI      S IT++ TQ F+ D   L  L P+    
Sbjct: 64  HVTYVRNFTDVDDKINARAAESGRSI------SEITAETTQWFLDDMAALGALEPSIRND 117

Query: 121 --HQ---PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQK 174
             HQ   PRAT +IPQM+ +I+ +I  GHAYEA   ++F   S   +YG  S R +D+  
Sbjct: 118 PDHQKAMPRATQYIPQMVAMIEGLIAKGHAYEAEGHVLFAVDSWREHYGKLSGRSVDDMI 177

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G RV    +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIH
Sbjct: 178 AGARVEVAPYKRNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAHELLGESFDIH 237

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHENEIAQSCCA    + A  W+HN  L +EG+KMSKS GNF T+ +LLE 
Sbjct: 238 GGGNDLMFPHHENEIAQSCCAHPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE- 296

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDP 349
                +  P  VIR   L THYR+P+D+T ++  EA+  L KW   +       +  +D 
Sbjct: 297 -----QGIPGEVIRFVFLSTHYRKPMDWTAEKAREAKETLWKWQNLTDGAERNRRPYLD- 350

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIA 408
            V+ AL +DLNT  AI  LH+  +E+    D    F ++  +LGI +  ++ + K++  A
Sbjct: 351 -VIEALSDDLNTSLAISLLHQKFKEARTQDDANRFF-STLSLLGIGQNWRDGVRKSVEKA 408

Query: 409 ------IEKLVQERLILLKMKKFSSADYIRKQL 435
                 +++L+++       K + ++D IR  L
Sbjct: 409 FTTSGLLDRLIEQMEEARAKKDWKTSDQIRDAL 441


>gi|23015242|ref|ZP_00055024.1| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 460

 Score =  386 bits (991), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 218/477 (45%), Positives = 280/477 (58%), Gaps = 46/477 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R    F+ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL+  Y    V
Sbjct: 5   LYNTLTRTKDVFEPLVPGHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLKTLY--PSV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRN+TD+DDKI  +A+         + IS+IT + T  F +D   L CL P  +PRAT
Sbjct: 63  RYVRNVTDVDDKINAKAKA------TGEPISVITERTTALFHEDIGALNCLMPDVEPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HI QMI +I+ +I  G AY A   ++F   ++ +YG+ SRR  DE   G RV    +KK
Sbjct: 117 AHIGQMIAMIERLIEKGFAYAAEGHVLFAVGAMADYGALSRRSSDEMIAGARVEVAPYKK 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGG DL+FPHHE
Sbjct: 177 DPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSLQHLGETFDIHGGGQDLVFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS CA+  +  A  W+HNG+L +EG KMSKS GNF T+ +LL      G++ P   
Sbjct: 237 NEIAQSTCANG-KPFARFWLHNGWLMVEGEKMSKSLGNFFTVRDLL------GQA-PGEA 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSALYN 357
           IRLAML THY +P D+T   L +A+  L +          +D +         +L+AL +
Sbjct: 289 IRLAMLATHYHQPFDWTSDGLKQAKATLDRLYTALRGAADVDASGYEAEVPLEMLAALKD 348

Query: 358 DLNT-VSAIQALHKLARESTKNHDL------LPIFNASAHILGIEVCK-EHLNKNISIA- 408
           DLNT +  I  LH+LA    K   L           AS H+LG+     E   K    A 
Sbjct: 349 DLNTPLXPISHLHELAGALNKATGLEDKARRKGALLASGHLLGLLYQDPEAWFKGTGAAD 408

Query: 409 ------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 IE  +  R    K K F+ AD IR+ L +KG +LED      G   T WK+
Sbjct: 409 GPADAEIEAAIIARTEARKAKNFAEADRIRQDLAAKGVVLED------GAGGTTWKR 459


>gi|218533086|ref|YP_002423902.1| cysteinyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218525389|gb|ACK85974.1| cysteinyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 462

 Score =  385 bits (989), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 208/477 (43%), Positives = 285/477 (59%), Gaps = 54/477 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA +    I I +    +T     QF +D   L  L   
Sbjct: 61  YGPAHVTYARNVTDVDDKINARALER--GITIRE----LTDGTLAQFHRDIRDLGVLMAD 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLSGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------P 338
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W        P
Sbjct: 295 TIRQVLD-------DWPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEARP 347

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
                +G+++     AL +DLNT +A+  LH+LA  S           A A ++G     
Sbjct: 348 DAGAPEGVVE-----ALCDDLNTPAALGELHRLAGTSPS------ALKAGAGLMGFLAVT 396

Query: 399 EHLNK-------NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +   +        I +A +E L+ ER      K ++++D +R  L + G  ++D K+
Sbjct: 397 QAQREAERVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTAMGVSVKDNKD 453


>gi|163736517|ref|ZP_02143936.1| hypothetical protein RGBS107_15336 [Phaeobacter gallaeciensis
           BS107]
 gi|161390387|gb|EDQ14737.1| hypothetical protein RGBS107_15336 [Phaeobacter gallaeciensis
           BS107]
          Length = 465

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 199/447 (44%), Positives = 269/447 (60%), Gaps = 23/447 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R       I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 4   IKLHNTRTRGKEVLNPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGTD 63

Query: 65  CVTYVRNITDIDDKI----IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            VTY RN TD+DDKI    + R     P   + + +   T +    ++ D   L  L P 
Sbjct: 64  HVTYARNFTDVDDKINATALARKEAGAPGT-LEELVQERTEETISWYLADMAELGALEPD 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PRAT +IPQMI +I+ +I  GHAY +    ++F   S  +YG+ S R +D+   G RV
Sbjct: 123 HMPRATAYIPQMIAMIEELIAKGHAYADGAGHVLFSVKSYKDYGALSGRSVDDMIAGARV 182

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS    G  FDIHGGG D
Sbjct: 183 EVADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGDSFDIHGGGND 242

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+ +LL+      
Sbjct: 243 LMFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------ 296

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDP--AVLSALY 356
           + +P  VIRL  L THYR+P+D+T ++  EAE  L KW Q  +T+    +P   V++AL 
Sbjct: 297 QGYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWYQLAATALDNEEPYVGVINALS 356

Query: 357 NDLNTVSAIQALHKL--ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI--EKL 412
           +DLNT  AI  LH+L  A ++      L        ++G +       +NI + +   KL
Sbjct: 357 DDLNTAQAIAELHQLFHAGDAASMRASLKFMG----LMGADTPTWATGENIDLTLYERKL 412

Query: 413 VQERLILLKMKKFSSADYIRKQLESKG 439
              R + ++ K FS  D ++    + G
Sbjct: 413 SDAREVAMQSKDFSEVDRLKAAFVAAG 439


>gi|254564109|ref|YP_003071204.1| cysteine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254271387|emb|CAX27400.1| cysteine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 462

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/472 (43%), Positives = 284/472 (60%), Gaps = 44/472 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFAPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA +    I I +    +T     QF +D   L  L   
Sbjct: 61  YGPAHVTYARNVTDVDDKINARALER--GITIRE----LTDGTLAQFHRDIRDLGVLMAD 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAKGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STS 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W +    +  
Sbjct: 295 TIRQVLD-------DWPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAVP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V+ AL +DLNT +A+  LH+LA  S           A A ++G     +   +
Sbjct: 348 DAEVPEGVVEALCDDLNTPAALGELHRLAGTSPS------ALKAGAGLMGFLAVTQAQRE 401

Query: 404 -------NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                   I +A +E L+ ER      K ++++D +R  L + G  ++D K+
Sbjct: 402 AARVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTALGVSVKDNKD 453


>gi|110834996|ref|YP_693855.1| cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123050340|sp|Q0VML5|SYC_ALCBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110648107|emb|CAL17583.1| Cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 460

 Score =  384 bits (987), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 216/480 (45%), Positives = 284/480 (59%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL  K  +F  +DP+ I +YVCGPTVY+F HIGNARP++VFDVLYRLL+  Y   
Sbjct: 3   LRLQNTLTGKKDDFIPLDPNRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRLY--P 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKII+ A          +AIS +T + TQ F  D   L    P+  P+
Sbjct: 61  NVVYARNITDIDDKIIKAAADN------GEAISTLTERFTQAFADDMASLNAKTPSIIPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HIP+MI +I  ++  GHAYEA+ +++F   S+P+YG  S RK+++   G RV    +
Sbjct: 115 ATDHIPEMIQMIAILVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDMLAGARVEVADY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DFILWK ST  +PGW+SPWGRGRPGWHIECSAM   +LG V DIHGGG DLIFPH
Sbjct: 175 KRHPGDFILWKPSTDEQPGWDSPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ CCA   +     W+HNG++N++G KMSKS GNF  + +LL   ++ G +   
Sbjct: 235 HENEIAQGCCAHGTDYV-RYWLHNGYINIDGEKMSKSLGNFRLVRDLL--TQYHGET--- 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE--------ILLSKWPQTSTSKGIIDP---AVLS 353
             +R A+L +HYR P++F+   L  AE         LL +    +   G   P    VL 
Sbjct: 289 --LRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLGRGETVAPEAGYQLPDNHPVLD 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-DLLP-------IFNASAHILGIEVCKEHLNKNI 405
           AL +DLNT  A+ ALH +A E  K   D  P              +L +E      NKN+
Sbjct: 347 ALKDDLNTSEAVSALHAIAGELNKAELDDKPKLKAELLAAADLLGLLTVEPTAWFQNKNV 406

Query: 406 S------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           S       AI+ LV+ER    K K F+ AD IR+QL   G  LED +        TRW +
Sbjct: 407 SEDGLSNDAIDALVEERTQAKKDKNFARADEIRQQLTKAGIQLEDTR------EGTRWSR 460


>gi|188584469|ref|YP_001927914.1| cysteinyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347967|gb|ACB83379.1| cysteinyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 462

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 208/472 (44%), Positives = 283/472 (59%), Gaps = 44/472 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFAPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG + VTY RN+TD+DDKI  RA +   +I        +T     QF KD   L  L   
Sbjct: 61  YGPEHVTYARNVTDVDDKINARALERGITI------RALTDGTLAQFHKDIRDLGVLMAE 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIGEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMEAGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDAPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LGK FDIH GG+DLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGKTFDIHAGGIDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---TSTS 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W +    +  
Sbjct: 295 TIRQVLD-------DWPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI---EVCKEH 400
              +   V+ AL +DLNT +AI  LH+LA              A A ++G       K  
Sbjct: 348 DAAVPGGVVEALGDDLNTPAAIGELHRLAGSDAG------ALKAGAGLMGFLPTTKAKRE 401

Query: 401 LNK----NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             +     I +A +E L+ ER      K ++++D +R  L + G  ++D K+
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTALGVSVKDNKD 453


>gi|254708550|ref|ZP_05170378.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261316050|ref|ZP_05955247.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261305076|gb|EEY08573.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
          Length = 470

 Score =  384 bits (985), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 212/468 (45%), Positives = 282/468 (60%), Gaps = 52/468 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG + VTY RNITD+DDKI  RA +
Sbjct: 1   MRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGAQHVTYARNITDVDDKINARAAR 60

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           ++P +P N+AI  +T     QF  D T L  L PT QPRAT H+ +M  +I  ++  G A
Sbjct: 61  DYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQPRATEHMDEMRAMIDRLVQRGVA 120

Query: 146 YEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           Y A + ++F  S++     P YG+ +RR +DE   G RV    +K++  DF+LWK S   
Sbjct: 121 YVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGARVDVASYKRDEMDFVLWKPSKKG 180

Query: 201 EPGWESPWG---RGRPGWHIECSAMSSHYL-----GKV---------FDIHGGGLDLIFP 243
           EPGW SP G    GRPGWHIECSAMS   L     G +         FDIHGGG+DL+FP
Sbjct: 181 EPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGLKCDDPERNQFDIHGGGIDLVFP 240

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-----ETKKFG 298
           HHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS GNFITI ++L     +  ++G
Sbjct: 241 HHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKSLGNFITIRDVLNDGLPQLGEWG 300

Query: 299 GRS----WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----- 349
             +    W     RL+ML THYREPI++T QRL E+   L +W      +G   P     
Sbjct: 301 DNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESADELHRWYGLLRDEGFGAPEKLSH 360

Query: 350 --AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             AV +AL +DLN+ +AI AL    R++ K  D+  +    A ++G+         ++ I
Sbjct: 361 ASAVAAALCDDLNSWAAITAL----RQAFKVRDVAALGEGMA-LMGLLDPYFVTASDVPI 415

Query: 408 ---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                    AI   + ERL  +  K ++ AD IR +L  +G  L++ +
Sbjct: 416 FARADVDASAIAARIAERLNFINAKNWAEADRIRDELLQEGVQLKEAR 463


>gi|260575276|ref|ZP_05843276.1| cysteinyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022536|gb|EEW25832.1| cysteinyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 480

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/467 (44%), Positives = 264/467 (56%), Gaps = 39/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN   R   +F  +D +N+RMYVCGPTVYD AHIGNARP++VFDVL+RLLR+ YGE 
Sbjct: 4   IRLYNGKTRAKEDFTPLDAANVRMYVCGPTVYDRAHIGNARPVVVFDVLFRLLRHVYGEG 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  +A            I  IT +    +  D   L  L PTH+PR
Sbjct: 64  HVTYVRNFTDVDDKINAKA------AATGRPIRAITDETIAWYHADMDALGALRPTHEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I QMI +I  +I  GHAY A   ++FD  S P+YG  S R ID+   G RV    +
Sbjct: 118 ATEYIGQMIAMIAGLIASGHAYAAEGHVLFDVRSYPDYGRLSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S    PGW+SPWG GRPGWHIECSAMS   LG  FDIHGGG+DL FPH
Sbjct: 178 KRDPMDFVLWKPSDAATPGWDSPWGYGRPGWHIECSAMSDALLGASFDIHGGGIDLQFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA   +  A +W+HN  L +EG+KMSKS GNF T+ +LL+      +  P 
Sbjct: 238 HENEVAQSACAHPGQGFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGII-----------DP 349
            VIRL  L THY +P+D+T ++  +AE  L  W     Q   S  ++           D 
Sbjct: 292 EVIRLVYLGTHYSKPMDWTAEKAAQAEATLRDWYLHLHQHGFSADMVRVLKEAGQWKADD 351

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFN---ASAHILGIEVCK 398
             +  L NDLNT  AI  LH LA+  T           +LL   N     A +  I V +
Sbjct: 352 EFIGVLSNDLNTSGAIARLHVLAKNRTAATLAPFAFGLELLGFVNDWSMLAELAHIGVSQ 411

Query: 399 E-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             H    +   +  L+ ER      + F+ AD IR  L   G  + D
Sbjct: 412 SGHHEPWVESVVAGLLFERQEARASRNFAVADRIRDVLTEAGVQVTD 458


>gi|163854141|ref|YP_001642184.1| cysteinyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665746|gb|ABY33113.1| cysteinyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 462

 Score =  382 bits (982), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 207/472 (43%), Positives = 283/472 (59%), Gaps = 44/472 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA +    I I +    +T     QF +D   L  L   
Sbjct: 61  YGPAHVTYARNVTDVDDKINARALER--GITIRE----LTDGTLAQFHRDIRDLGVLMAD 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTS 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W      +  
Sbjct: 295 TIRQVLD-------DWPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V+ AL +DLNT +A+  LH+LA  S           A A ++G     +   +
Sbjct: 348 GAEVPEGVVEALCDDLNTPAALGELHRLAGTSPS------ALKAGAGLMGFLAVTQAQRE 401

Query: 404 -------NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                   I +A +E L+ ER      K ++++D +R  L + G  ++D K+
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTAMGVSVKDNKD 453


>gi|170751939|ref|YP_001758199.1| cysteinyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170658461|gb|ACB27516.1| cysteinyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 465

 Score =  382 bits (981), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 193/411 (46%), Positives = 257/411 (62%), Gaps = 33/411 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL      F  IDP ++R+Y CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MAPMLRLYNTLTGAKEAFAPIDPQHVRVYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG + VTY RN+TD+DDKI  RA +   SI        +T     QF +D   L  L P 
Sbjct: 61  YGPEHVTYARNVTDVDDKINARAAERGVSI------RELTDGTLAQFHRDVRDLGVLMPE 114

Query: 121 H-----------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M+ +I+ ++  GHAY A + ++FD  S+P+YG  S+R 
Sbjct: 115 DVNLTGARPRFVEPRATDHIVEMVTMIEALVRAGHAYVAADHVLFDVPSMPDYGGLSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK + P EP W SP G    GRPGWHIECSAMS+ +
Sbjct: 175 LDEMEAGARVEVAPYKRSPLDFVLWKPAKPGEPSWPSPAGIAVAGRPGWHIECSAMSAKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GG+DLIFPHHENE+AQS C       AN+W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGRTFDIHAGGIDLIFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTS 343
           TI ++L         WP  V+RL ML T YR+PID+T++ L E+  +L +W      + +
Sbjct: 295 TIRDVLN-------DWPGEVVRLTMLKTQYRQPIDWTLRGLEESARVLDRWYNAAGDAPA 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
              I   V+ AL +DLNT +AI  LH+LA  +      L    A A++LG 
Sbjct: 348 ASDIPVGVVEALCDDLNTPAAINELHRLAGGAEAQPGAL---RAGANLLGF 395


>gi|294677292|ref|YP_003577907.1| cysteinyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476112|gb|ADE85500.1| cysteinyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 460

 Score =  382 bits (980), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 195/449 (43%), Positives = 267/449 (59%), Gaps = 30/449 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++N+  R+   F+ +DP ++RMY+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 2   IRLHNSKTRRKETFRPLDPRHVRMYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGAD 61

Query: 65  CVTYVRNITDIDDKI----IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            VTYVRN TD+DDKI    + R     P   + + I   T +    +  D   L  L P 
Sbjct: 62  HVTYVRNFTDVDDKINATALARKEAGAPGT-LEELIRARTEETIGWYHADMDALGALRPD 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H+PRAT++I  MI +I ++I+ GHAY  +  ++F   S   YG+ S R +D+   G RV 
Sbjct: 121 HEPRATDYIGAMITMIADLIVRGHAYAKDGHVLFRVRSYTEYGALSGRSVDDMIAGARVE 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG+DL
Sbjct: 181 VAPFKEDPMDFVLWKPSDADLPGWDSPWGRGRPGWHIECSAMSYELLGASFDIHAGGIDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQSCCA      AN+W+HN  L +EG+KMSKS GNF T+ +LL+      +
Sbjct: 241 QFPHHENEIAQSCCAHPEGGFANVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 294

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----IDPAVLSAL 355
             P  VIR   L THY +P+D+T ++  +AE  L KW   + + G+     + P VL AL
Sbjct: 295 GIPGEVIRFVFLQTHYGKPMDWTAEKAAQAEATLRKW--RALTAGVAPSHEVAPGVLEAL 352

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIE 410
            +DLNT  A+  LH L  E         +   SA +LG+ + +     +    ++S    
Sbjct: 353 ADDLNTAGALAVLHGLTGEPA-------LLKGSAQMLGLLLDEMGDWAKAPEVDLSGFAA 405

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKG 439
           KL   R   ++ K F+  D ++  L + G
Sbjct: 406 KLSDLRAKAMETKDFAPVDALKSALMAAG 434


>gi|86138285|ref|ZP_01056859.1| cysteinyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824810|gb|EAQ45011.1| cysteinyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 469

 Score =  381 bits (978), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 206/453 (45%), Positives = 273/453 (60%), Gaps = 33/453 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK +EF  ID +N+RMY+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 8   IKLHNTKTRKKSEFTPIDANNVRMYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHCYGAD 67

Query: 65  CVTYVRNITDIDDKI---IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI       +    +  + + ++  T +    ++ D  +L  L P H
Sbjct: 68  HVTYVRNFTDVDDKINATALARKAAGAAGTLEELVAERTEETIGWYLSDMGKLGALEPGH 127

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PRAT +I QM+ +IQN+I  GHAY +    ++F   S  NYG  S R +D+   G RV 
Sbjct: 128 MPRATQYIRQMVTMIQNLIAKGHAYADGAGHVLFSVKSYENYGQLSGRSVDDMIAGARVE 187

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG DL
Sbjct: 188 VADNKRDPMDFVLWKPSTEELPGWDSPWGRGRPGWHIECSAMSQELLGATFDIHAGGNDL 247

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA+  +  A  W+HN  L +EG+KMSKS GNF T+++LL+      +
Sbjct: 248 MFPHHENEIAQSCCANGDDSFARYWLHNEMLQVEGKKMSKSLGNFFTVHDLLD------Q 301

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLSA 354
             P  VIR   L THYR+P+D+T ++  EAE  L KW   +     I+P      AVL A
Sbjct: 302 GIPGEVIRFVFLQTHYRKPMDWTEKKAKEAEATLRKWRALTAG---IEPAANAAAAVLDA 358

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK-------NISI 407
           L +DLNT  AI  +HKLA          P   ASA ++G+    E L         ++S 
Sbjct: 359 LADDLNTAGAIAEMHKLAAAGDG-----PGLLASAQLMGL--LSEALGDWAATPDLDLSA 411

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
              +L+  R   ++ K FS  D ++    + G 
Sbjct: 412 YATQLLDARETAMQSKDFSQVDRLKAAFVAAGL 444


>gi|110680368|ref|YP_683375.1| cysteinyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123065404|sp|Q164A4|SYC_ROSDO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109456484|gb|ABG32689.1| cysteinyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 473

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 211/473 (44%), Positives = 284/473 (60%), Gaps = 39/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT  R+  +F+ I+  ++RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG  
Sbjct: 3   IKLYNTKTRRKEDFEPINKDDVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHTYGPD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT---- 120
            VTYVRN TD+DDKI  RA +   S      I+ IT++ TQ F+ D   +  L P+    
Sbjct: 63  HVTYVRNFTDVDDKINARAAESGRS------IAEITAETTQWFLDDMAAVGALEPSIKDR 116

Query: 121 -HQ---PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
            HQ   PRAT +I QM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+   G
Sbjct: 117 DHQRAMPRATQYIAQMVTMIEDLIAKGHAYAAEGHVLFAVESYSKYGALSGRSIDDMIAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPW------GRGRPGWHIECSAMSSHYLGKV 230
            RV    +K+NP DF+LWK S    PGW  P       GRGRPGWHIECSAM+   LG  
Sbjct: 177 ARVEVAPYKRNPMDFVLWKPSDDATPGWAGPVVGGKSIGRGRPGWHIECSAMAHDLLGAT 236

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG DL+FPHHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+ +
Sbjct: 237 FDIHGGGNDLMFPHHENEIAQSTCAG--HNFANVWMHNEMLQVEGKKMSKSLGNFFTVRD 294

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDP 349
           LL+      +  P  VIR  ML THYR+P+D+T ++  EAE  L KW + T  ++    P
Sbjct: 295 LLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKREEAEETLWKWKKLTDGAESSRRP 348

Query: 350 --AVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEH 400
              +++AL +DLNT  AI  LH+   E+  + D       LL +        G++V  E 
Sbjct: 349 HLEIIAALKDDLNTPLAISILHRKFAEAKSDDDKNRFLSTLLLLGIGETWRDGVDVAVEE 408

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             + +S+ IE L++        K ++++D  R  LES G  ++  K+  + +R
Sbjct: 409 AFQTVSL-IEALIESIEKARAQKDWATSDRTRDGLESAGVKVQISKDGVSWER 460


>gi|114570948|ref|YP_757628.1| cysteinyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122315352|sp|Q0AM03|SYC_MARMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114341410|gb|ABI66690.1| cysteinyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 461

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 196/464 (42%), Positives = 272/464 (58%), Gaps = 41/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T+ R+  +F+  DP  + MYVCGPTVY +AHIGNARP +VFD L+R+LR  YGE 
Sbjct: 4   LTLFDTMARRKRDFEPTDPGRVTMYVCGPTVYSYAHIGNARPAVVFDTLFRVLRRLYGED 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKIIE AR+     PI D    ITS     +  D   L    PT +P 
Sbjct: 64  QVIYARNITDVDDKIIETARES--GKPIED----ITSHYADIYRADMGALGVTLPTIEPH 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HIP+MI ++QN++  GHAYEA+  ++FD SS   YG  S R +D+   G RV    +
Sbjct: 118 ATDHIPEMIGMVQNLVYSGHAYEADGHVLFDVSSYEKYGRLSNRDLDDMIAGARVEVASY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF+LWK +   EPGW+SPWGRGRPGWH+ECSAMS  +LGK  DIHGGG DL+FPH
Sbjct: 178 KRSPADFVLWKPAKDDEPGWDSPWGRGRPGWHLECSAMSEKHLGKTIDIHGGGTDLVFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA +    AN W+HNGFL +   KMSKS GN   +++L+       + +P 
Sbjct: 238 HENEIAQSVCAHKGAPMANYWLHNGFLTMGTDKMSKSLGNVQLVHDLI-------KDYPG 290

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPAVLSALYN 357
            V+R A+L  HYR P+ +T   L +          +L +  +   +   + PA L AL++
Sbjct: 291 EVLRYALLTAHYRAPLTWTADLLAKTRRSLDRIYGVLRRLGEIEAAPSDVPPAFLEALHD 350

Query: 358 DLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHILGIEVCK-------EH 400
           DLNT  A+  L +LA  + K            +LL    A+A +LG+             
Sbjct: 351 DLNTPKALSELFQLAGNANKALSDVEKAQAKGELL----AAAGMLGLGQADPDAWFGLTD 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L+      I+ L+  R    + K + +AD +R +L +    ++D
Sbjct: 407 LDPAERARIDDLIVRRQTAREEKDWPTADAVRDELNALKVQVDD 450


>gi|310815554|ref|YP_003963518.1| cysteinyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754289|gb|ADO42218.1| cysteinyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 453

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/447 (45%), Positives = 270/447 (60%), Gaps = 23/447 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I ++NT  R+   F  ++P+N+R+Y+CGPTVYD AH+GNARP++VFDVL RLLR+ YG 
Sbjct: 3   QITLHNTKTRQTEVFVPLNPANVRLYLCGPTVYDRAHLGNARPVLVFDVLVRLLRHVYGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RN TD+DDKI +RA     SI        IT +    +  D   L    P  +P
Sbjct: 63  DAVTYARNFTDVDDKINDRAAATGRSI------RDITDETIGWYHADMDALGADRPDLEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+ IP M+ +I  +I  GHAY     ++F   S  +YG+ S R +++   G RV    
Sbjct: 117 RATDWIPAMVEMITGLIDRGHAYATEGHVLFAVDSYADYGALSGRSVEDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   +PGW+SPWG GRPGWHIECSAMS   LG  FDIHGGG+DL FP
Sbjct: 177 FKRNPMDFVLWKPSDTDQPGWDSPWGHGRPGWHIECSAMSYGLLGASFDIHGGGIDLQFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      A  WIHN  L +EGRKMSKS GNF T+ +LL+      +  P
Sbjct: 237 HHENEIAQSCCAHPEASFARYWIHNEMLQVEGRKMSKSLGNFFTVRDLLD------QGVP 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAVLSALYNDLNT 361
             VIRL ML THY  P+D+T  +   AE  L KW       + G IDP V++AL ++LNT
Sbjct: 291 GEVIRLVMLGTHYSRPMDWTEDKRLTAEGALRKWRALTAGAAPGAIDPEVITALADNLNT 350

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI--EVCKEHL--NKNISIAIEKLVQERL 417
             AI ALH+LA        L     ASA +LG+  +   + L  + + +  ++ L+ +R 
Sbjct: 351 AGAISALHRLANAGDAGGLL-----ASAQMLGLLQDGMGDWLAASGDDAALVDGLLADRA 405

Query: 418 ILLKMKKFSSADYIRKQLESKGFILED 444
                + F++AD IR +L + G +L+D
Sbjct: 406 AAKAARDFAAADAIRDRLVAAGVVLKD 432


>gi|83950345|ref|ZP_00959078.1| cysteinyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83838244|gb|EAP77540.1| cysteinyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 465

 Score =  378 bits (971), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 203/449 (45%), Positives = 264/449 (58%), Gaps = 31/449 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY-- 61
           +IK++N+  R    F  +DP N+RMYVCGPTVYD AH+GNARP++VFD+LYRLLR+    
Sbjct: 8   EIKLHNSRSRTKEVFTPLDPQNVRMYVCGPTVYDRAHLGNARPVVVFDMLYRLLRHVAKT 67

Query: 62  -GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            G   VTY RN TD+DDKI  RA      +  +  I  IT++ TQ F+ D   L  L P 
Sbjct: 68  NGWGKVTYARNFTDVDDKINARA------LASDRRIEEITAETTQWFLDDMAALGALEPD 121

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H PRAT +IPQMI +I+ +I   HAY A   ++F   S   YG  S R +D+   G RV 
Sbjct: 122 HMPRATAYIPQMIAMIEGLIEGDHAYAAEGHVLFRVRSYKAYGGLSGRSVDDMIAGARVE 181

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK S   +PGWESPWG GRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 182 VAPFKEDPMDFVLWKPSDATQPGWESPWGYGRPGWHIECSAMSYEILGPSFDIHGGGNDL 241

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA    + A +W+HN  L +EG+KMSKS GNF T+ +LL+      +
Sbjct: 242 MFPHHENEIAQSCCAHPEGEFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 295

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAVLSALYND 358
             P  VIR   L THYR+P+D+T ++   A+  L  +         G  D  V+ AL +D
Sbjct: 296 GIPGEVIRFVFLSTHYRKPMDWTAEKARNAKNTLDHFLGLIVGVEPGEPDDEVVLALADD 355

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC--------KEHLNKNISIAIE 410
           LNT  A+  LH LA+E   +     +  AS   LG ++         +EH +    +A E
Sbjct: 356 LNTHKALTRLHTLAKEKKAD-----VLKASLLFLGFDLSTLESGWFGEEHYDGLAPLA-E 409

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKG 439
           +L Q R   +  K FS  D ++  L   G
Sbjct: 410 RLGQVRAAAMVSKDFSEVDRLKSALLEAG 438


>gi|254474999|ref|ZP_05088385.1| cysteinyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214029242|gb|EEB70077.1| cysteinyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 525

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/453 (44%), Positives = 267/453 (58%), Gaps = 35/453 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R       I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR  YG  
Sbjct: 61  IKLHNTRTRGKEVLDPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLREVYGPD 120

Query: 65  CVTYVRNITDIDDKI----IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V+Y RN TD+DDKI    + R     P   + + +   T +    ++ D   L  L P 
Sbjct: 121 HVSYARNFTDVDDKINATAVARKEAGAPGT-LEELVQERTEETISWYLADMAELGALEPD 179

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PRAT +IPQMI +I+ +I  GHAY +    ++F   S  +YG+ S R +D    G RV
Sbjct: 180 HMPRATAYIPQMIAMIEELIAKGHAYPDGAGHVLFSVKSYKDYGALSGRSVDAMIAGARV 239

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS    G+ FDIHGGG D
Sbjct: 240 EVADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGESFDIHGGGND 299

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+ +LLE      
Sbjct: 300 LMFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------ 353

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLS 353
           + +P  VIR   L THYR+P+D+T ++  EAE  L KW   +     I+P      AV++
Sbjct: 354 QGYPGEVIRFVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTAG---IEPAPSAAAAVIA 410

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK-------NIS 406
           AL +DLNT  A+  LHKLA        L     ASA ++G+    E L         ++S
Sbjct: 411 ALSDDLNTAGAVAELHKLASGGDAASLL-----ASAQLMGL--LTEELGAWAKGEEVDLS 463

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           +  + L   R + ++ K F+  D ++      G
Sbjct: 464 VYEKALFDARTVAMESKDFAEVDRLKSAYLEAG 496


>gi|254785975|ref|YP_003073404.1| cysteinyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511843|sp|C5BI15|SYC_TERTT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|237685828|gb|ACR13092.1| cysteine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 458

 Score =  377 bits (969), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/483 (42%), Positives = 282/483 (58%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R+  +F  +DP+ I+MYVCGPTVY+  HIGNARP++VFD L+R+L+Y Y   
Sbjct: 3   LRIYNTATRQKEDFVPVDPAAIKMYVCGPTVYNLVHIGNARPVVVFDTLFRVLQYLY--D 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKI++ A +        + IS + ++   ++ +D  +L  L PT  P 
Sbjct: 61  NVIYARNITDIDDKIMKAAAEN------GEPISALAARYAAEYERDMAQLNALQPTIVPY 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ QMI + Q ++  GHAY A+  ++FD  S+ +YG  S R +++   G RV    +
Sbjct: 115 ATEHLEQMIAMTQALVNKGHAYAADGHVLFDVQSMGDYGELSNRSLEDMLDGARVEVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK   DF+LWK S   EPGWESPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIFPH
Sbjct: 175 KKYAGDFVLWKPSADAEPGWESPWGRGRPGWHLECSAMIEKHLGNTIDIHGGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS CA   E+    W+HNG++N++G KMSKS GNF T+ ELLE       S+P 
Sbjct: 235 HENERAQSQCAHDGEQYVKYWMHNGYINIDGEKMSKSLGNFRTVRELLE-------SFPG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQ----------------RLTEAEILLSKWPQTSTSKGIID 348
            VIR A+L   YR  +DF+ +                R TE EIL +  P  + S G   
Sbjct: 288 EVIRFALLSAQYRSELDFSAELLEQSKASLDSLYGALRKTEEEILPAG-PALAASPG--- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI-----EV 396
               +AL +DLNT  AI  LH+LAR       ES +      +  A A+++G+     E 
Sbjct: 344 ---FAALMDDLNTPLAISELHQLARTVHKAEPESEEAQSAKGMMLALANLMGLLQEDPET 400

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             +   +     IE L+ ER      K+++ AD IR++L++KG +LED +        T 
Sbjct: 401 WFQGGAEQDVSWIEALIAERQQAKLDKQYARADEIREELKAKGILLEDSREG------TT 454

Query: 457 WKQ 459
           WK+
Sbjct: 455 WKK 457


>gi|296534285|ref|ZP_06896763.1| cysteine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296265401|gb|EFH11548.1| cysteine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 476

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 207/492 (42%), Positives = 276/492 (56%), Gaps = 55/492 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++  +N+  R+   F  +DP ++R+YVCGPTVYD AH+GNARP++VFDVL RLLR  +  
Sbjct: 3   ELAFHNSATRQREIFTPLDPQHVRLYVCGPTVYDLAHLGNARPVVVFDVLARLLRRRFPR 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI  R+++        + I+ IT++ T  F +D   L CL P  +P
Sbjct: 63  --VTYVRNITDVDDKINARSQES------GEPIAAITARTTADFHRDMAALGCLPPDEEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I QMI LI+ +I +GHAY A   ++F  SS P YG+ S R  DE   G RV    
Sbjct: 115 RATDNIAQMIQLIERLIANGHAYAAEGHVLFSVSSFPGYGALSGRSPDEMLAGARVEIAP 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+   DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  YLG  FDIHGGG DLIFP
Sbjct: 175 YKREAGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSWRYLGTDFDIHGGGHDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA    + A  W+HNG L ++G KMSKS GNF+T+ ++L     G  +W 
Sbjct: 235 HHENEVAQSVCAFPGSRFARTWLHNGMLLVDGEKMSKSLGNFLTVRDIL-----GRGAWA 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE--------ILLSKWPQTSTSKGIIDPAV---L 352
               RL +L THYR  +D+TV+RL EA+        +L    PQ      ++       L
Sbjct: 290 GEAFRLLLLKTHYRAALDYTVERLEEAKAELDDFYALLARDLPQPEADDALVAEMAEWAL 349

Query: 353 SALYNDLNT--------------------VSAIQALHKLARESTKNHDLLPIFNASAHIL 392
             L +DLNT                     SA   LH++ R+   +          A  L
Sbjct: 350 EPLADDLNTPLAIARLRDLRTLENVATVGGSATTVLHRIGRDWQPDSGQAAAALRQAAAL 409

Query: 393 GIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +           +  S AIE  +Q RL   K K ++ AD IR  L ++G +LED   
Sbjct: 410 LGLLGGDARAWRQGGEGDSAAIEAAIQARLDARKAKNWAEADRIRADLLAQGIVLED--- 466

Query: 448 PDNGQRMTRWKQ 459
              G   T W++
Sbjct: 467 ---GAGGTTWRR 475


>gi|254437047|ref|ZP_05050541.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252493|gb|EDY76807.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 481

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 203/460 (44%), Positives = 275/460 (59%), Gaps = 33/460 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT  RK  EF  ID  ++RMYVCGPTVYD AH+GNARP+IVFD L+RLLR+ YG  
Sbjct: 3   IKLYNTKVRKKVEFSPIDHKDVRMYVCGPTVYDRAHLGNARPVIVFDTLFRLLRHTYGAD 62

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A   +Q   +  + D I+  +S+    +++D   +  L P+ 
Sbjct: 63  HVTYVRNFTDVDDKINATAFARQQAGAAGTLEDLIAERSSETIGWYLEDMAAVGALEPSA 122

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT +I QMI +I+++I  GHAYEA    +F   S   YG+ S R +D+   G RV  
Sbjct: 123 MPRATQYIAQMITMIEDLIAKGHAYEAEGHALFRVRSYTEYGALSGRSVDDMIAGARVEV 182

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++P DF+LWK S+ ++PGW+SPWGRGRPGWHIECSAM+   LG  FDIHGGG DL 
Sbjct: 183 APYKEDPMDFVLWKPSSDVQPGWDSPWGRGRPGWHIECSAMALDLLGGEFDIHGGGNDLQ 242

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA      AN+W+HN  L +EGRKMSKS GNF T+ +LLE      + 
Sbjct: 243 FPHHENEIAQSTCAGH--GFANVWMHNEMLQVEGRKMSKSLGNFFTVRDLLE------QG 294

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSA 354
            P  VIR  ML THYR+P+D+T  ++  AE  L  W         T+      D  +L+A
Sbjct: 295 VPGEVIRFVMLSTHYRKPMDWTAAKVQFAEKTLIGWRTATMELTPTAAPDFTADKEILAA 354

Query: 355 LYNDLNT---VSAIQALHKLARESTKNHDLLPI----FNASAHILGIEVCK----EHLNK 403
           L +DLNT   +S + AL    +    N   +      F A+  + G+   +    ++++ 
Sbjct: 355 LSDDLNTHLMISKLNALRPKPQMLLDNARFVGFLSDEFRAAREVHGLPSGQYSDFDNIDL 414

Query: 404 NISIAI----EKLVQERLILLKMKKFSSADYIRKQLESKG 439
           N  I +    +K+ + R   L+ K FS+ D I+ +    G
Sbjct: 415 NAPIHLHLLNDKITEIRATALQTKNFSALDEIKNKAAEAG 454


>gi|254429556|ref|ZP_05043263.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195725|gb|EDX90684.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 460

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/480 (43%), Positives = 277/480 (57%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL  K  +F  +DP  I +YVCGPTVY+F HIGNARP++VFDVLYRLL+  Y   
Sbjct: 3   LRLQNTLTGKKDDFIPLDPDRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRLY--P 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKII+ A +        + IS++T + T  F +D   L    P   P+
Sbjct: 61  NVVYARNITDIDDKIIKAAAEN------GEDISVLTERFTAAFAEDMASLNAKTPNIIPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HIP+MI +I  ++  GHAYEA+ +++F   S+P+YG  S RK+++   G RV    +
Sbjct: 115 ATDHIPEMIQMIATLVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDMLAGARVEVADY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DFILWK S+  +PGWESPWGRGRPGWHIECSAM   +LG V DIHGGG DLIFPH
Sbjct: 175 KRHPGDFILWKPSSDEQPGWESPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ CCA   +     W+HNG++N++G KMSKS GNF  + +LL         +  
Sbjct: 235 HENEIAQGCCAHGTDYV-RYWLHNGYINIDGEKMSKSLGNFRLVRDLL-------TQYHG 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-IIDPA----------VLS 353
            ++R A+L +HYR P++F+   L  AE  L         +G  + P           VL 
Sbjct: 287 EILRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLGRGETVAPEADYQLPDNHPVLD 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHLNKNI 405
           AL +DLNT  A+ ALH +A E  K            L        +L ++      NKN+
Sbjct: 347 ALKDDLNTSEAVSALHAIAGELNKAELADKPTLKAELLAAADLLGLLTVDPTAWFQNKNV 406

Query: 406 S------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           S        I+ LV ER    K K F+ AD IR+QL   G  LED +        TRW +
Sbjct: 407 SEDGLSNDDIDALVAERTQAKKDKNFARADEIRQQLTDAGIQLEDTR------EGTRWSR 460


>gi|254450306|ref|ZP_05063743.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264712|gb|EDY88982.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 468

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 186/372 (50%), Positives = 242/372 (65%), Gaps = 14/372 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT  RK  EF  ID +N+RMYVCGPTVYD AH+GNARP+IVFD L+RLLRY YG  
Sbjct: 3   IKLYNTKVRKKVEFSPIDENNVRMYVCGPTVYDRAHLGNARPVIVFDTLFRLLRYTYGAD 62

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A   +Q   +  + + I+  + +    +++D   +  L PT 
Sbjct: 63  HVTYVRNFTDVDDKINATALARQQAGAAGTLENLIAERSDETIGWYLEDMAAVGALEPTE 122

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT +I QMI +I+++I   HAYEA    +F   S   YG+ S R +D+   G RV  
Sbjct: 123 MPRATQYIAQMIAMIKDLIAKEHAYEAEGHALFRVRSYAEYGTLSGRSVDDMIAGARVEV 182

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++P DF+LWK S+  +PGW+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL 
Sbjct: 183 APYKEDPMDFVLWKPSSDDQPGWDSPWGHGRPGWHIECSAMALDLLGDAFDIHGGGNDLT 242

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+ +LL+      + 
Sbjct: 243 FPHHENEIAQSTCAGH--GFANVWMHNEMLQVEGKKMSKSLGNFFTVRDLLK------QG 294

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTSKGIIDPAVLSALYND 358
            P  VIR  ML THYR+P+++T ++  EAE  L KW    + S  K I+ P  + A+ +D
Sbjct: 295 VPGQVIRFVMLSTHYRKPMNWTEKKRVEAERTLRKWFAAIRLSAPKAIVSPEFIKAVSDD 354

Query: 359 LNTVSAIQALHK 370
           LN+  AI  LH+
Sbjct: 355 LNSPQAIAVLHQ 366


>gi|126726937|ref|ZP_01742776.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126703895|gb|EBA02989.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 464

 Score =  375 bits (964), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 206/453 (45%), Positives = 264/453 (58%), Gaps = 32/453 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK+YNT  RK   F  +D +++RMYVCGPTVYD AHIGNARP+IVFDVLYRLLR  YG 
Sbjct: 3   EIKLYNTATRKKGVFTPLDTNDVRMYVCGPTVYDRAHIGNARPVIVFDVLYRLLREVYGI 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIP---INDAISIITSKNTQQFVKDTTRLACLAPT 120
           + V Y RN TD+DDKI   A     +     + + I   T +    ++ D   L  + P 
Sbjct: 63  EHVKYARNFTDVDDKINATAASRKAAGAKGTLEELIQERTDETIAWYLDDMRSLGNIDPD 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PRAT  I QMI +   +I  GHAY A   ++F   S  NYG+ S R +D+   G RV 
Sbjct: 123 FAPRATEFIDQMIEMNSELIGKGHAYAAEGHVLFAVDSYKNYGALSGRSVDDMIAGARVE 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K+NP DF+LWK S    PGWESPWGRGRPGWHIECSAM+    G+ FDIHGGGLDL
Sbjct: 183 VAPYKRNPMDFVLWKPSDAETPGWESPWGRGRPGWHIECSAMARELFGERFDIHGGGLDL 242

Query: 241 IFPHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
            FPHHENE+AQS  CC D  E  A +W+HN  L +EG+KMSKS GNF ++ ELL+     
Sbjct: 243 AFPHHENELAQSKACCGD--ESFAQVWMHNEMLQVEGKKMSKSLGNFFSVRELLD----- 295

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------VL 352
            + +   V R   L THYR+P+D+T ++  EAE  L KW   S     I+PA      V+
Sbjct: 296 -QGYSGEVARFVYLSTHYRKPMDWTDKKAREAEATLRKWRALSAG---IEPASRAGASVV 351

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-----EVCKEHLNKNISI 407
           +AL +DLNT  AI  LHKLA  S K  +L     ASA +LG+         + +  ++S 
Sbjct: 352 AALADDLNTPGAIAELHKLA-SSGKAAEL----KASALLLGLLQDDMGDWADVVAVDLSA 406

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
              KL   R   +  K F+  D ++K     G 
Sbjct: 407 FEAKLSDVRDAAMVSKDFAEVDRLKKAFTDAGL 439


>gi|83592028|ref|YP_425780.1| cysteinyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|109894932|sp|Q2RWK2|SYC_RHORT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83574942|gb|ABC21493.1| cysteinyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 459

 Score =  375 bits (963), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 209/468 (44%), Positives = 275/468 (58%), Gaps = 43/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NT+ R    F+ +DP ++R+YVCGPTVYD AHIGNARP+IVFD+L RLLR  Y + 
Sbjct: 3   LHIHNTMTRTKEVFEPLDPGHVRLYVCGPTVYDRAHIGNARPVIVFDLLARLLRRLYPQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA            I  IT + T+ F +D   L  L P  +PR
Sbjct: 62  -VTYVRNITDVDDKINARASAS------GRTIGEITEETTRLFHEDMAELGALPPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  M+ +I+ +I  GHAYEA   ++F   S+  YGS S R +D+   G RV    +
Sbjct: 115 ATAHIADMVAMIERLIAKGHAYEAEGHVLFSVPSMGAYGSLSGRSMDDMIAGARVEVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF+LWK S    PGW+SPWGRGRPGWHIECSAMSS YLG  FDIHGGGLDLIFPH
Sbjct: 175 KRDPADFVLWKPSDASLPGWDSPWGRGRPGWHIECSAMSSRYLGPSFDIHGGGLDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     A  W+HNG+L +EG KMSKS GNF+T+ +LL+         P 
Sbjct: 235 HENEIAQSVCCNGPGTFARYWMHNGYLMVEGEKMSKSLGNFVTVRDLLDQA-------PG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPAVLSALYN 357
             +RLAML THYR+P D+T + L +A          L +    + S   +   V++AL +
Sbjct: 288 EAMRLAMLGTHYRQPFDWTAEGLEQARRGLDRLYSALRRVAGIAASPAEVPEGVMAALCD 347

Query: 358 DLNTVSAIQALHKLA----RESTKNHD------------LLPIFNASAHILGIEVCKEHL 401
           DLNT  A+  ++ L     R +T                LL +F A   +    +C    
Sbjct: 348 DLNTPKALAEVYDLLGVLNRATTTEEQAKAKGALLAAGALLGLFQADPEVW---LCGAGT 404

Query: 402 NKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +   +A  +E L+ +R    + + F+ AD IR +L   G +LED  N
Sbjct: 405 GEEEGLAARVEDLICQRKAARQARDFARADAIRDELTQAGIVLEDGPN 452


>gi|304309880|ref|YP_003809478.1| Cysteinyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795613|emb|CBL43812.1| Cysteinyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 474

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 202/489 (41%), Positives = 279/489 (57%), Gaps = 55/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++NTL  +   F  I P  + MYVCGPTVY++ HIGNARP++VFD LYRLL+ +Y E 
Sbjct: 3   IYLHNTLSGQKERFVPISPDRVTMYVCGPTVYNYVHIGNARPVVVFDTLYRLLKRHYPE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKI + A          + I  ++S+    +  D   L  L P  +PR
Sbjct: 62  -VRYARNITDVDDKINKAASDN------RETICELSSRYADAYRSDMQALFNLTPQFEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  MI +I  +I  GHAYEA   ++F+ S+ P+YG  S+R +D+   G RV    +
Sbjct: 115 ATDNIGAMIEIITTLIEKGHAYEAEGHVLFNVSTDPHYGCLSKRNLDDMIAGARVEVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNPADF+LWK S+   PGW+SPWGRGRPGWHIEC+AM + +LGK  DIH GGLDL+FPH
Sbjct: 175 KKNPADFVLWKPSSDDLPGWDSPWGRGRPGWHIECTAMINAHLGKTIDIHAGGLDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ  CA + E+  N W+HNG+L ++G KMSKS GNF T++ELL+        WP 
Sbjct: 235 HENEIAQGTCAHQDERYVNYWLHNGYLTIDGEKMSKSLGNFATVHELLQ-------HWPG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVL---- 352
            V+R A+L  HYR P+D++   LT+A   L +         P +        P  L    
Sbjct: 288 EVLRYALLSAHYRSPLDWSDDALTQARASLDRLYGALRGHTPSSCADTHATAPDALQHPL 347

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI------- 394
                  L +DL T  A+  LH+LA E+ ++ D      L  +  ++   +G+       
Sbjct: 348 LDTLEQHLADDLATPQALAVLHQLAGEANRSSDTPSRTQLQAVLASAGERMGLLTQDPES 407

Query: 395 ------EVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                    ++     +   AIE L+Q+R    K K F+ +D IR  L+++G  LED + 
Sbjct: 408 WFKWQAPAARDATGNGLDDAAIEDLIQQRRDARKAKNFARSDEIRDLLKAQGIELEDTR- 466

Query: 448 PDNGQRMTR 456
              G R TR
Sbjct: 467 --EGTRWTR 473


>gi|163746511|ref|ZP_02153869.1| cysteinyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380396|gb|EDQ04807.1| cysteinyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 456

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/447 (44%), Positives = 263/447 (58%), Gaps = 20/447 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK  +F  ID  N++MYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG  
Sbjct: 7   IKLHNTATRKKEDFTPIDADNVQMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHVYGTD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA     SI        IT++ TQ ++ D   +  L P H PR
Sbjct: 67  HVTYVRNFTDVDDKINARAATSGRSI------GEITAETTQWYLDDMAAVGALEPDHMPR 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IPQM+ +I+ +I  G+AYEA   ++F       YG+ S R +D+   G RV    +
Sbjct: 121 ATQYIPQMVAMIRGLIDEGYAYEAEGHVLFRVRKYAEYGALSGRSVDDMIAGARVEVAPY 180

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S    PGW SPWG+GRPGWHIECSAM+   LG  FDIHGGG+DL FPH
Sbjct: 181 KEDPMDFVLWKPSDEGTPGWPSPWGQGRPGWHIECSAMAHDLLGAQFDIHGGGIDLQFPH 240

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN W+HN  L +EG+KMSKS GNF T+ +LL+    G      
Sbjct: 241 HENEIAQSKCAGH--GFANYWLHNEMLQVEGKKMSKSLGNFFTVRDLLDQGVQG------ 292

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--PQTSTSKGIIDPAVLSALYNDLNTV 362
            VIR  ML THYR+P+D+T ++  EAE  L KW               +++ L +DLNT 
Sbjct: 293 EVIRFVMLSTHYRKPMDWTEKKREEAEKTLRKWYLQAAEAEAAPPSAELVALLADDLNTH 352

Query: 363 SAIQALHKL--ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
            A+   H+L  A ++      + +      ++      + L  ++S     L   R   +
Sbjct: 353 GALTECHRLSNANDTAGLRGAMTLLGLMGDLIPEWAAVQAL--DLSDIEAFLSDARATAM 410

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKN 447
           + K F+  D I+  L S G  ++  K+
Sbjct: 411 ETKDFAEVDRIKTALTSVGIEVQMSKD 437


>gi|77463274|ref|YP_352778.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|109894933|sp|Q3J2V7|SYC_RHOS4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77387692|gb|ABA78877.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 499

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 185/398 (46%), Positives = 247/398 (62%), Gaps = 16/398 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R+   F+ ID  N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3   EIRLTNTKSRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISII---TSKNTQQFVKDTTRLACLAPT 120
             VTYVRN TD+DDKI   A     +       ++I   T +  + + +D   L  L PT
Sbjct: 63  GHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRPT 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H+PRAT  I  MI +I+++I  GHAYE    ++F   S  +YG+ S R +D+   G RV 
Sbjct: 123 HEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVE 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG+DL
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGATFDIHAGGIDL 242

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQSCCA      A +W+HN  L ++GRKMSKS GNF T+ +LL+      +
Sbjct: 243 QFPHHENEIAQSCCAHPEGGFARVWMHNEMLLVDGRKMSKSLGNFFTVRDLLD------Q 296

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPAVLSALYND 358
            WP  VIR+  L THY  P+D+T ++  +A+  L  W +     + G +   V+  L +D
Sbjct: 297 GWPGEVIRMVYLGTHYGRPMDWTAEKAEQAKTTLRNWAEMVEGAAPGEVRAEVVDPLSDD 356

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           LNT  A+ AL  L     K  D   +   SAH+LG+++
Sbjct: 357 LNTAGALAALSDL----YKRKDAAGLLG-SAHLLGVDL 389


>gi|254514497|ref|ZP_05126558.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676740|gb|EED33105.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 462

 Score =  371 bits (953), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 205/464 (44%), Positives = 279/464 (60%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT  R+   F  +DP  + MYVCGPTVY+ AHIGNARP++VFD L+RLL+ +Y + 
Sbjct: 3   LQLYNTRARRKEAFDPVDPDCVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTHYDK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKI+ RA QE        AI +I  +  Q++ +DT +L  L PT +P 
Sbjct: 62  -VVYARNITDIDDKIM-RAAQEQGV-----AIDVIAGEFAQKYREDTAQLNALPPTLEPH 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  MI L +++I   HAY A   ++FD +S+ +YG  S R +D+   G RV    +
Sbjct: 115 ATDNIGPMIALTESLIERNHAYAAEGHVLFDVTSMKDYGQLSGRSLDDMLAGARVEVAGY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S+  EPGWESPWGR RPGWH+ECSAM   +LG   DIHGGG DLIFPH
Sbjct: 175 KRHPGDFVLWKPSSADEPGWESPWGRVRPGWHLECSAMIREHLGPTIDIHGGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQSCCA   ++   +W+HN FL+++G KMSKS GN  TI ELL   +        
Sbjct: 235 HENELAQSCCA-FGDEFVRVWMHNAFLDMDGEKMSKSLGNVATIRELLTRYR-------G 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGI-IDPAV-------LSAL 355
            V+R A+L  HYR P++F+   L +AE  L+ +  T  S +GI +D  V        +AL
Sbjct: 287 EVLRFALLSAHYRSPLNFSEALLEQAEQTLTSFYNTLRSVQGIELDCEVSLEGEGFYAAL 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGI----------EVCKEH 400
            +DLNT  AI  LH LAR+  K        L     A+ ++LGI                
Sbjct: 347 CDDLNTPLAISELHVLARDINKASGSDKPALKARLLAAGNLLGILQQDPLEWLQGDGASD 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L    + A+E L+ ER+     + ++ AD IR +L + G ILED
Sbjct: 407 LQGLDAEAVEALIAERVAAKANRDYARADEIRDELTAGGIILED 450


>gi|126728611|ref|ZP_01744426.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
 gi|126710541|gb|EBA09592.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
          Length = 511

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 186/379 (49%), Positives = 235/379 (62%), Gaps = 16/379 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R    F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG 
Sbjct: 10  EIRLTNTRNRAKEVFVPIDPENVRMYVCGPTVYDRAHLGNARPVLVFDVLYRLLRHVYGA 69

Query: 64  KCVTYVRNITDIDDKI--IERARQEHPSI-PINDAISIITSKNTQQFVKDTTRLACLAPT 120
             VTYVRN TD+DDKI     AR+E  +   + D I   T +    ++KD   L  L P 
Sbjct: 70  DHVTYVRNFTDVDDKINATALARKEAGADGTLEDLIRERTEETISWYLKDMGELGALEPD 129

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PRAT +I  M+ +I+ +I  GHAY A   ++F   S   YG  S R +D+   G RV 
Sbjct: 130 RMPRATEYIAPMVAMIEGLIESGHAYAAEGHVLFRVRSYEAYGKLSGRSVDDMMAGARVE 189

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS    G  FDIHGGG DL
Sbjct: 190 VAPYKEDPMDFVLWKPSSDELPGWDSPWGRGRPGWHIECSAMSYELFGSSFDIHGGGNDL 249

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA      A +W+HN  L +EGRKMSKS GNF T+ +LL+      +
Sbjct: 250 MFPHHENEIAQSCCAHPEGDFAKVWMHNEMLQVEGRKMSKSLGNFFTVRDLLD------Q 303

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------IDPAVLS 353
             P  VIR  ML THYR+P+D+T ++  EA+  L+ W       G+        D  V+S
Sbjct: 304 GVPGEVIRFVMLSTHYRKPMDWTAEKAREAKRKLAYWRALLKEAGVEGVDSTAADLGVVS 363

Query: 354 ALYNDLNTVSAIQALHKLA 372
            L  DLNT  A+  L  +A
Sbjct: 364 DLAEDLNTKPALDKLGSIA 382


>gi|163735857|ref|ZP_02143286.1| cysteinyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161390943|gb|EDQ15283.1| cysteinyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 490

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 210/481 (43%), Positives = 280/481 (58%), Gaps = 57/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT  R+  +F+ I+  ++RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG  
Sbjct: 3   IKLYNTKTRRKEDFEPINKDDVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHTYGPD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT---- 120
            VTYVRN TD+DDKI  RA +         AI  IT++ TQ F+ D   +  L P+    
Sbjct: 63  HVTYVRNFTDVDDKINARAAES------GRAIGEITAETTQWFLDDMAAVGALEPSIKDR 116

Query: 121 -HQ---PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
            HQ   PRAT +I QM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+   G
Sbjct: 117 DHQRAMPRATQYIAQMVTMIEDLIAKGHAYAAEGHVLFAVESYSKYGALSGRSIDDMIAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPW------GRGRPGWHIECSAMSSHYLGKV 230
            RV    +K+NP DF+LWK S    PGW  P       GRGRPGWHIECSAM+   LG  
Sbjct: 177 ARVEVAPYKRNPMDFVLWKPSDDATPGWAGPVVGGKSIGRGRPGWHIECSAMAHDLLGAT 236

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG DL+FPHHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+ +
Sbjct: 237 FDIHGGGNDLMFPHHENEIAQSTCAG--HDFANVWMHNEMLQVEGKKMSKSLGNFFTVRD 294

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTS 343
           LL+      +  P  VIR  ML THYR+P+D+T ++  EAE       ++L +   + + 
Sbjct: 295 LLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKRKEAEKAVSDIHLVLLRAGYSPSM 348

Query: 344 KGII------DPA--VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
             ++       PA  V++ L +DLNT  A+QAL KL    T     +  F ASA  LG+ 
Sbjct: 349 VALLKKNNRWQPASEVVNFLRDDLNTHGALQALRKLNTNGTALQ--IAEFAASAEFLGLV 406

Query: 396 VCKEHLNKNISIAI-------EKLVQERLILLKM-----KKFSSADYIRKQLESKGFILE 443
              ++L     + +       +  +   ++L++      K+F  AD IR  LE  G  + 
Sbjct: 407 FDWDNLGLRAGLGVTFVGDHPDTDMIANILLVRQEHKQRKQFEEADRIRALLEKAGVQVN 466

Query: 444 D 444
           D
Sbjct: 467 D 467


>gi|295687961|ref|YP_003591654.1| cysteinyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295429864|gb|ADG09036.1| cysteinyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 463

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 197/479 (41%), Positives = 277/479 (57%), Gaps = 42/479 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI++TL R+  +F   DP  + MYVCGPTVY++AHIGN RP++VFDVLYR+LR+ YGE+
Sbjct: 3   LKIHDTLAREKRDFVPADPKRVTMYVCGPTVYNYAHIGNFRPVVVFDVLYRVLRHLYGEE 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI ++A  E   +PI    S+IT +    + +D   L  L P  +P+
Sbjct: 63  AVVYARNVTDVDDKINKKAADE--GVPI----SVITERYLAAYHEDADALGALRPDLEPK 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  ++ +I  ++ +G AY A   ++FDT S  +YG  S R +DE   G RV    +
Sbjct: 117 ATEHIDAILEMIGQLVDNGSAYAAEGHVLFDTQSFADYGQLSGRPLDEMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF+LWK S   EP WESPWG GRPGWHIECSAM    LGK  DIH GG+DL FPH
Sbjct: 177 KRHPADFVLWKPSKENEPEWESPWGAGRPGWHIECSAMIDKALGKTIDIHAGGIDLTFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA +    AN W+HNGFL++ G KMSKS GN I  +ELL+T        P 
Sbjct: 237 HENEVAQSRCAHKTAVLANYWMHNGFLDMGGEKMSKSLGNVIIPHELLKTV-------PG 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA-VLSALY 356
            VIR A+L  HYR+P+D+T + L +++  L +              + +  PA V++AL 
Sbjct: 290 EVIRWALLSAHYRQPLDWTPELLEQSKKSLDRLYGALRRAKDVPMDQAMEAPAEVIAALM 349

Query: 357 NDLNT---VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN--------- 404
           +DLNT    SA   +  L  ++    D + I    A +L        L  +         
Sbjct: 350 DDLNTPLATSAFFEVSSLIEKAVTAGDSVAIAANKARLLEAGALLGFLQADPDSWFEGDA 409

Query: 405 ---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              +   +E L+ +R+     K +++AD IR +L++ G ++ D      G     W+ K
Sbjct: 410 SDELKAKVEDLLAQRVAARAAKDWTAADAIRAELDALGVVVMD------GPSGATWRMK 462


>gi|209542601|ref|YP_002274830.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530278|gb|ACI50215.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 453

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 200/467 (42%), Positives = 270/467 (57%), Gaps = 32/467 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ ++++  RK   F  +DP N+R+Y CGPTVYD AHIGN R M+  D+L RLLR+ Y  
Sbjct: 7   QLTLHDSRSRKTVPFAPLDPGNVRVYYCGPTVYDLAHIGNLRAMVTADILVRLLRHLYPR 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI  RAR         + I  +T++  + F +D   +  L P  +P
Sbjct: 67  --VTYVRNITDVDDKINTRARAN------GETIDSLTARTIRDFHEDLDAVGILPPDIEP 118

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+HI +M+ LI  +I  GHAYEA   ++F  S  P YG+ S R  ++   G RV    
Sbjct: 119 RATHHIAEMLTLIGQLIDSGHAYEAQGHVLFAVSRFPAYGALSGRSPEDLLAGARVEVAP 178

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P  PGWESPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+FP
Sbjct: 179 YKRDPGDFVLWKPSAPDLPGWESPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLLFP 238

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS C     + AN W+HN  L + G KMSKS GNF+T+ + L          P
Sbjct: 239 HHENELAQSQCCFPHGRFANHWVHNAMLLVNGEKMSKSLGNFLTVRDALSVS-------P 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPA-VLSALYND 358
           A  +RL +L   YR  ++FT+  L +A+  L+++      T     +  PA VL+AL +D
Sbjct: 292 AEALRLLLLHAQYRSVLNFTLAGLEDAKQTLNRFYRAVGDTPPDGTVPVPAPVLAALCDD 351

Query: 359 LNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI-----AIEKL 412
           LNT  A+  +H LA R    + D      A+  +LG+    E              IE+L
Sbjct: 352 LNTPRALAEMHALADRALAGDRDAALGLRAAGQLLGLLGQTEDAWFRAGTYVHPETIERL 411

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + ER    K + F+ AD IR+ L   G +LED      G   T W++
Sbjct: 412 IVERQDARKSRDFARADAIRESLAKDGIVLED------GPSGTTWRR 452


>gi|16124715|ref|NP_419279.1| cysteinyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233429|ref|YP_002515865.1| cysteinyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|24418699|sp|Q9AAY2|SYC_CAUCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781233|sp|B8GZS3|SYC_CAUCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13421633|gb|AAK22447.1| cysteinyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220962601|gb|ACL93957.1| cysteinyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 463

 Score =  368 bits (945), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 198/479 (41%), Positives = 279/479 (58%), Gaps = 42/479 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI++TL R+  +F   DP  + MYVCGPTVY++AHIGN RP++VFDVL+R+LR+ YGE 
Sbjct: 3   LKIHDTLTREKRDFVPADPQRVTMYVCGPTVYNYAHIGNFRPVVVFDVLFRVLRHLYGED 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI ++A  E   +PI    S+IT +    + +D   L  L PT +P+
Sbjct: 63  AVVYARNVTDVDDKINQKAADE--GVPI----SVITDRYLAAYHQDADALGALRPTLEPK 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  ++ +I  ++ +G AY A   ++FDT S  +YG  S R +DE   G RV    +
Sbjct: 117 ATEHIGAILEMIGQLVENGSAYAAEGHVLFDTQSFADYGQLSGRPLDEMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF+LWK S   EP WESPWG GRPGWHIECSAM    LG+  DIH GG+DL FPH
Sbjct: 177 KRHPADFVLWKPSKENEPEWESPWGAGRPGWHIECSAMIDKALGQTIDIHAGGIDLTFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA +    AN W+HNGFL++ G KMSKS GN I  +ELLET        P 
Sbjct: 237 HENEVAQSRCAHKTSVLANYWMHNGFLDMSGEKMSKSLGNVIIPHELLETT-------PG 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA-VLSALY 356
            VIR A+L  HYR+P+D+T + L +++  L +           +  + +  PA V+SAL 
Sbjct: 290 EVIRWALLSAHYRQPLDWTPELLEQSKKSLDRLYGALRRAKDVAPDQAMEAPAEVMSALM 349

Query: 357 NDLNTVSAIQALHKLA---RESTKNHDLLPIFNASAHILGIEVCKEHLNKN--------- 404
           +DLNT  A  A  +++    ++    D + I    A +L        L  +         
Sbjct: 350 DDLNTPLATSAFFEVSSAIEKAVTAGDTVAIAANKARLLEAGALLGFLQADPDAWFEGDA 409

Query: 405 ---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              +   +E L+ +R+     K +S+AD IR +L++ G ++ D      G     W+ K
Sbjct: 410 SDELKAQVEDLLAKRVAARAAKDWSAADAIRGELDALGVVVMD------GPAGATWRMK 462


>gi|332558152|ref|ZP_08412474.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275864|gb|EGJ21179.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 484

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 199/468 (42%), Positives = 272/468 (58%), Gaps = 43/468 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R+   F+ IDP N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3   EIRLTNTKSRRKEAFEPIDPGNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISII---TSKNTQQFVKDTTRLACLAPT 120
           + VTYVRN TD+DDKI   A     +       ++I   T +  + + +D   L  L PT
Sbjct: 63  RHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRPT 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H+PRAT  I  MI +I++++  GHAYE    ++F   S  +YG+ S R +D+   G RV 
Sbjct: 123 HEPRATEWIGAMIAMIEDLMAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVE 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-------VFDI 233
               K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K        FDI
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMADGLLMKDLPENKRSFDI 242

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DL FPHHENEIAQS CA      A +W+HN  L ++GRKMSKS GNF T+ +LL+
Sbjct: 243 HAGGIDLQFPHHENEIAQSRCAHPEGGFAKVWMHNEMLLVDGRKMSKSLGNFFTVRDLLD 302

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPA 350
                 + WP  VIR+  L THY +P+D+T ++  +A+  L  W   +    ++ I    
Sbjct: 303 ------QGWPGEVIRMVYLGTHYGKPMDWTAEKAEQAKATLEGWFNLTDGLEAEEISGER 356

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN---KNI-- 405
            L  L +DLNT  AI ALH+LA EST          A   +LG+    EH+N   + I  
Sbjct: 357 YLDELCDDLNTAGAIAALHRLASESTAGR-----LKAGMRLLGLPDA-EHVNWWRREIVT 410

Query: 406 -------------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                        ++ I  L+Q    L   K++  AD +++ LE+ G 
Sbjct: 411 LFGTASSGSTPLYTVEIVPLLQRWQDLRLAKRYGEADALKRALENVGL 458


>gi|190570547|ref|YP_001974905.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|254781699|sp|B3CN54|SYC_WOLPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|190356819|emb|CAQ54186.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 464

 Score =  368 bits (944), Expect = 1e-99,   Method: Compositional matrix adjust.
 Identities = 208/475 (43%), Positives = 281/475 (59%), Gaps = 38/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K   F  ID  +I+MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG+ 
Sbjct: 2   VKLYNTLTKKKEPFTPIDKDHIKMYVCGPTVYDTAHIGNARSIVVYDVLFRLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  I+   T+ F +D   + C  PT++P+
Sbjct: 61  -VTYVRNITDIDDKIINAANEK------NSNIESISKYYTKTFHEDMESINCAEPTYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I LI++++  GHAYE+N  + F   S P YG  S +KIDE   G+RV    +
Sbjct: 114 ATENIDNIIKLIESLLQAGHAYESNKHVYFSVESYPEYGVLSGKKIDELNYGSRVEVGEN 173

Query: 185 KKNPADFILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +      +   W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANETDYKLSSHWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  W+HNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAESTFAKYWVHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------IDPAVLSA 354
                VIR A+L THYR+P+D+T   ++E++  L+K+ +   S  I      +    + A
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISESQETLNKFYRLLRSTCIEESDTEVSKDFIEA 347

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEHLNKNIS 406
           L NDLN   A+  LH++A E  K  +      L   F  SA  +GI     +E     +S
Sbjct: 348 LKNDLNIPEAVAILHEMATEINKTSNEYEKLKLTKKFVKSARFIGILESSYQEWFASGVS 407

Query: 407 -IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              IE+L+  R +  + K + +AD IR+QL+  G  +      DN    T W  K
Sbjct: 408 HQEIERLIDLRKVAKQNKDYDTADKIREQLKQMGVTI-----SDNEDGTTTWYGK 457


>gi|326403598|ref|YP_004283680.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050460|dbj|BAJ80798.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 449

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 201/473 (42%), Positives = 270/473 (57%), Gaps = 44/473 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK++NT  R+   F   DP+++++YVCGPTVYD AH+GNAR ++VFD L RLLR+ +  
Sbjct: 3   QIKLHNTKTRRREPFAPADPAHVKLYVCGPTVYDRAHLGNARTVVVFDTLVRLLRHLFPR 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKI  RA +        + I  IT++ T  F +D   L C  P  +P
Sbjct: 63  --VTYVRNITDIDDKINARAAE------TGETIGEITARTTSWFHEDMAALYCAPPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI  +I LI+ +I  GHAY A   ++F  ++   YG FS R  +E   G RV    
Sbjct: 115 RATGHIGDIIALIERLIARGHAYAAEGHVLFAVATDAEYGKFSGRSPEELLAGARVDVAT 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P  PGW+SPWGRGRPGWHIECSAM    LG+  DIHGGG DLIFP
Sbjct: 175 YKRDPGDFVLWKPSPPDLPGWDSPWGRGRPGWHIECSAMIHATLGETIDIHGGGADLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    + A +W+H G L + G+KMSKS GNF T+ ++L+         P
Sbjct: 235 HHENEIAQSCCAFPGSEFARVWVHAGMLQVNGQKMSKSLGNFRTVQDVLDEA-------P 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYN 357
              +R  +L THYR  +DF+   L EA+  L ++ +                A + AL +
Sbjct: 288 GEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFYRALEKHADPAPAATPPAAFIEALAD 347

Query: 358 DLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHLNKNIS 406
           DLNT  AI  LH LA  + +              L+ IFN +A     +  +     +  
Sbjct: 348 DLNTPGAIAELHALADAAMQGDAASAAGLRAAGMLIGIFNHTAD----QWFRGEATDDAR 403

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             I+ L+ ERL   + K F+ AD IR +L + G +LED      G   T W++
Sbjct: 404 --IDALIAERLAARRNKDFARADAIRAELAAAGILLED------GPGGTTWRR 448


>gi|255262212|ref|ZP_05341554.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104547|gb|EET47221.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 460

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 193/442 (43%), Positives = 258/442 (58%), Gaps = 18/442 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NT  R   +F  +DP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 3   IRLHNTKTRTKEDFTPLDPDNVRMYVCGPTVYDRAHLGNARPVLVFDVLYRLLRHTYGAD 62

Query: 65  CVTYVRNITDIDDKI--IERARQEHPSI-PINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI     ARQE  +   + D I+  + +    ++ D   L  L P H
Sbjct: 63  HVTYVRNFTDVDDKINATALARQEAGAKGSLEDLIAERSDETISWYLADMGALGALEPNH 122

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT +I  M+ +I+ +I  GHAY      +F   S   YG+ S R +D+   G RV  
Sbjct: 123 APRATAYIAPMVAMIEGLIEGGHAYAKEGHALFRVRSYKEYGALSGRSVDDMIAGARVEV 182

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK ST  +PGW+SPWGRGRPGWHIECSAM+   LG  FDIHGGG DL 
Sbjct: 183 APFKEDPMDFVLWKPSTEDQPGWDSPWGRGRPGWHIECSAMAYDLLGPAFDIHGGGNDLQ 242

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQS CC       A +W+HN  L +EG+KMSKS GNF T+ +LL+      +
Sbjct: 243 FPHHENEIAQSKCCG---HDFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 293

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--DPAVLSALYND 358
             P  VIR  ML THYR+P+D+T ++  EAE  L KW + +    +         AL +D
Sbjct: 294 GVPGEVIRFVMLSTHYRKPMDWTDKKRAEAETTLRKWRKLTDGVALDMGQERASDALADD 353

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL-NKNISIAIEKLVQERL 417
           +N    I  +H LA  S  +   L    A   +LG  +    +   ++   +E     R 
Sbjct: 354 VNVSEVIMRMHSLA--SQGDAAALKATGAMIGLLGDNIGDWVVGGADLQAYVELFNATRS 411

Query: 418 ILLKMKKFSSADYIRKQLESKG 439
              + K F++ D ++ +L   G
Sbjct: 412 AATENKDFAAVDALKARLTEAG 433


>gi|148260406|ref|YP_001234533.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|187629816|sp|A5FYD2|SYC_ACICJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146402087|gb|ABQ30614.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 449

 Score =  367 bits (941), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 201/473 (42%), Positives = 270/473 (57%), Gaps = 44/473 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK++NT  R+   F   DP+++++YVCGPTVYD AH+GNAR ++VFD L RLLR+ +  
Sbjct: 3   QIKLHNTKTRRREPFAPADPAHVKLYVCGPTVYDRAHLGNARTVVVFDTLVRLLRHLFPR 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKI  RA +        + I  IT++ T  F +D   L C  P  +P
Sbjct: 63  --VTYVRNITDIDDKINARAAE------TGETIGEITARTTSWFHEDMAALYCAPPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI  +I LI+ +I  GHAY A   ++F  ++   YG FS R  +E   G RV    
Sbjct: 115 RATGHIGDIIALIERLIARGHAYAAEGHVLFAVATDAEYGKFSGRSPEELLAGARVDVAT 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P  PGW+SPWGRGRPGWHIECSAM    LG+  DIHGGG DLIFP
Sbjct: 175 YKRDPGDFVLWKPSPPDLPGWDSPWGRGRPGWHIECSAMIHATLGETIDIHGGGADLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    + A +W+H G L ++G+KMSKS GNF T+ ++L          P
Sbjct: 235 HHENEIAQSCCAFPGSEFARVWVHAGMLQVDGQKMSKSLGNFRTVQDVLGEA-------P 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYN 357
              +R  +L THYR  +DF+   L EA+  L ++ +                A + AL +
Sbjct: 288 GEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFYRALEKHADPAPAATPPAAFIEALAD 347

Query: 358 DLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHLNKNIS 406
           DLNT  AI  LH LA  + +              L+ IFN +A     +  +     +  
Sbjct: 348 DLNTPGAIAELHALADAAMQGDAASAAGLRAAGMLIGIFNHTAD----QWFRGEATDDAR 403

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             I+ L+ ERL   + K F+ AD IR +L + G +LED      G   T W++
Sbjct: 404 --IDALIAERLAARRNKDFARADAIRAELAAAGILLED------GPGGTTWRR 448


>gi|258543649|ref|YP_003189082.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634727|dbj|BAI00703.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637783|dbj|BAI03752.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640837|dbj|BAI06799.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643892|dbj|BAI09847.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646947|dbj|BAI12895.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256650000|dbj|BAI15941.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652990|dbj|BAI18924.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656044|dbj|BAI21971.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 477

 Score =  365 bits (938), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 203/464 (43%), Positives = 272/464 (58%), Gaps = 47/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++++  R    F  IDP+++++Y CGPTVYD AHIGN R M+  DVL RLLR+ Y   
Sbjct: 33  LSLHDSQSRATVPFTPIDPAHVKVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHVYPR- 91

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITD+DDKI  RAR         + I  +T + T++F +D   +  L P  +PR
Sbjct: 92  -VTFVRNITDVDDKITARARAN------GEDIGSLTQRTTEEFHQDLASMNVLPPDIEPR 144

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I +M  +I  +I +GHAYEA   ++F   S P+YG+ S R  +E + G RV    +
Sbjct: 145 ATHNIGEMQAMIARLIENGHAYEAEGHVLFSVGSFPSYGALSGRNPEELEAGARVEVAPY 204

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK S   +PGWESPWGRGRPGWHIECSAMS  YLG  FDIHGGG DL+FPH
Sbjct: 205 KKAPGDFVLWKPSDADQPGWESPWGRGRPGWHIECSAMSHRYLGDSFDIHGGGSDLLFPH 264

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS C     K AN W+HN  L +EG KMSKS GNF+TI ++L          PA
Sbjct: 265 HENERAQSLCCFPHGKFANYWVHNAMLLVEGEKMSKSLGNFLTIRDVLAQA-------PA 317

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSAL 355
             +RL +L  HYR  +++T   L EA   L ++         P+T   +G     V+ AL
Sbjct: 318 EALRLLLLGAHYRSTLNYTQAGLQEARKTLDRFYRALAAGPVPETDVPEG-----VMQAL 372

Query: 356 YNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGI-----------EVCKEHLNK 403
            +DLNT  AI  LH LA ++   +        A A +LG+           + C E    
Sbjct: 373 ADDLNTPKAIAELHALAAQALAGDRQAAGALKAGAGMLGLLQGDPEQWFKGDACDE---- 428

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               AIE L+ ERL   K + F+ AD +R QL+++G +LED K+
Sbjct: 429 --DAAIEALINERLAARKARDFAKADALRDQLQAQGIVLEDTKD 470


>gi|167648484|ref|YP_001686147.1| cysteinyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082061|sp|B0T101|SYC_CAUSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167350914|gb|ABZ73649.1| cysteinyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 462

 Score =  365 bits (938), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 192/478 (40%), Positives = 277/478 (57%), Gaps = 41/478 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T+ R+  +F   DP  + MYVCGPTVY+ AHIGN RP++VFDVL+RLLR+ YGE 
Sbjct: 3   LKLYDTMAREKRDFVPADPGRVTMYVCGPTVYNHAHIGNFRPVVVFDVLFRLLRHVYGED 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI  +A  E   I       +IT +    + +D   L  L P+ +P+
Sbjct: 63  AVVYARNVTDVDDKINAKATAEGVEI------KVITDRYLAAYHEDAAALLTLPPSLEPK 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+  +I +I  ++ +G AY A   ++FDT + P+YG  S R +D+   G RV    +
Sbjct: 117 ATEHMGPIIEMIGELVANGSAYAAEGHVLFDTQAFPDYGQLSGRDLDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF+LWK S   EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG+DL FPH
Sbjct: 177 KRHPADFVLWKPSKENEPEWDSPWGAGRPGWHIECSAMIDKTLGQTIDIHGGGIDLAFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA      AN W+HNGFL++ G KMSKS GN I  +ELL+T        P 
Sbjct: 237 HENELAQSRCAHGAPVLANYWLHNGFLDMAGEKMSKSLGNVIIPHELLKTT-------PG 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDPA--VLSALYN 357
             IR A+L  HYR+P+D+T + + +++  L +         +   G  +P+  V++AL +
Sbjct: 290 EAIRWALLSGHYRQPLDWTPELIEQSKKALDRLYGALRRAKTVEAGESEPSDEVMAALSD 349

Query: 358 DLNTVSAIQALHKLA----RESTKNHDLLPIFN-----ASAHILGIEVC------KEHLN 402
           DLNT  A+    +L+    R  T   +L    N     ASA +LG          +   +
Sbjct: 350 DLNTPLAVSGFFELSSAIERAVTAGDELAITANKGRLLASAGLLGFLQADPDSWFEGDAD 409

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            ++   +E L+  R+     K +++AD IR ++++ G ++ D      G     W+ K
Sbjct: 410 DDLKAKVEDLLARRIAARTAKDWTAADAIRAEIDALGVVVMD------GPAGATWRMK 461


>gi|58040207|ref|YP_192171.1| cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|61216109|sp|Q5FQ31|SYC_GLUOX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58002621|gb|AAW61515.1| Cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 452

 Score =  365 bits (937), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 202/468 (43%), Positives = 273/468 (58%), Gaps = 38/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R    F  +DP N+R+Y CGPTVYD AH+GN R M+  D+L RLLR  Y   
Sbjct: 9   LRLHDTHLRDKRPFTPLDPENVRVYFCGPTVYDRAHLGNLRAMMCADILIRLLRTMYPR- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TD+DDKI  RA++        + IS +T + TQ F +D   L  L P  +PR
Sbjct: 68  -VTYVRNVTDVDDKINARAKEN------GEDISALTERTTQAFHEDLASLFILPPDIEPR 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  M+ +I  ++ +GHAY A   ++F   + P+YG  S R +D+   G RV    +
Sbjct: 121 ATHHIDDMLEMIGRLVENGHAYVAEGHVLFAVRNFPSYGELSGRSLDDMIAGARVEVAPY 180

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S P  PGW+SP+GRGRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 181 KRDPGDFVLWKPSEPDLPGWDSPYGRGRPGWHIECSAMSHRYLGESFDIHGGGDDLLFPH 240

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS C     K A  W+HNG L   G KMSKS GNF TI E+L+         PA
Sbjct: 241 HENERAQSMCCYPHGKFATHWVHNGMLLSNGEKMSKSLGNFFTIREVLDRS-------PA 293

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLSALYND 358
             +RL  L  HYR  +DF+ ++L EA  +L +    +  +G   P      AV+ AL +D
Sbjct: 294 EPLRLLYLGAHYRSTLDFSWEKLEEARRVLDRL-YRALERGNAQPGTALPAAVMDALCDD 352

Query: 359 LNTVSAIQALHKLA-------RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           LNT  AI ALH LA       +++  +           ++   E  +  ++ +   AIEK
Sbjct: 353 LNTPLAIAALHPLADAAMQGDQDAASSLLAAGKLLGLFNVTPAEWFQSGVDAS---AIEK 409

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           L++ERL   K + F+ AD IR QL + G  LED      G   T W++
Sbjct: 410 LIEERLAARKSRDFARADAIRAQLAADGITLED------GPGGTTWRK 451


>gi|84515618|ref|ZP_01002980.1| cysteinyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510901|gb|EAQ07356.1| cysteinyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 477

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 206/465 (44%), Positives = 263/465 (56%), Gaps = 37/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NT  RK  +F  ID  N+RMY+CGPTVYD AH+GNARP +VFDVL+RLLR  YG K
Sbjct: 4   IRLHNTKSRKREDFVPIDARNVRMYLCGPTVYDRAHLGNARPSLVFDVLFRLLRQIYGAK 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI         +     AI  IT++    +  D   L  L PTH+PR
Sbjct: 64  HVTYVRNFTDVDDKI------NARAAAAGRAIGDITAETIGWYHADLDALGALRPTHEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I QMI +I ++I   HAYEA   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATQYIAQMIAMITDLIAKNHAYEAEGHVLFAVESYAEYGALSGRSIDDMIAGARVEIAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S    PGW+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL FPH
Sbjct: 178 KRNPMDFVLWKPSGDGVPGWDSPWGYGRPGWHIECSAMAHDLLGDSFDIHGGGNDLQFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA    + A  WIHN  L +EG+KMSKS GNF TI +LL+      +  P 
Sbjct: 238 HENEIAQSACAHPHGEFARYWIHNEMLQVEGKKMSKSLGNFFTIRDLLD------QGIPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------IDP 349
            VIRL ML THY + +D+T  R +EA++ L +W       G                 D 
Sbjct: 292 EVIRLVMLGTHYGKTMDWTEARRSEADLTLRRWYGILHGHGFGPDLIRALKADGKWQADA 351

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHL 401
             L  L NDLNT  AI  LH LA+  T           D+L +    A I  ++  +   
Sbjct: 352 EFLGVLANDLNTPGAIARLHVLAKGKTPTALAGFAHGLDMLGLVRDWAAIPLLDGAEAGP 411

Query: 402 NKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   ++A  ++ L+  R      K ++ AD +R  L S G  + D
Sbjct: 412 DVTPAVAARVDALLAARAAARAAKDWAQADDVRDILTSAGVQVTD 456


>gi|88705054|ref|ZP_01102766.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700749|gb|EAQ97856.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 462

 Score =  365 bits (936), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 198/464 (42%), Positives = 281/464 (60%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT  +    F+ + P+ + MYVCGPTVY+ AHIGNARP++VFD L+RLL+  Y E 
Sbjct: 3   LQLYNTRAKTKEVFRPLSPNRVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTRYDE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKI+  A+++        AI +I  + T ++ +DT +L  L PT +P 
Sbjct: 62  -VVYARNITDIDDKIMLAAKEQ------GVAIDVIAKEFTDKYREDTAQLNALPPTLEPH 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  MI L + +I  GHAY +   ++F  +S+ NYG  S R +D+   G RV    +
Sbjct: 115 ATDNIGPMIALTEKLIEKGHAYASEGHVLFAVTSMENYGQLSGRSLDDMLAGARVEVADY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S+  EPGW+SPWGR RPGWH+ECSAM   +LG   DIHGGG DLIFPH
Sbjct: 175 KRHPGDFVLWKPSSDDEPGWDSPWGRVRPGWHLECSAMIREHLGPTIDIHGGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQSCCA   ++   +W+HN FL+++G KMSKS GN  TI ELL   ++ G     
Sbjct: 235 HENELAQSCCA-FGDEFVRVWMHNAFLDMDGEKMSKSLGNVATIRELL--TRYRGE---- 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLSAL 355
            V+R A+L  HYR P++F+   L +AE  L+ +  T  S   I+          A  SAL
Sbjct: 288 -VLRFALLSAHYRSPLNFSEALLAQAEQTLTNFYNTLRSVQHIELDEDVPLEGEAFYSAL 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIE-------VCKEHLNK 403
            +DLNT  AI  LH LAR+  K  +     L     A+ ++LG+        +  +  + 
Sbjct: 347 CDDLNTPLAISELHALARDINKAAEDDKPQLKARLLAAGNLLGVLQHDPLEWLQGDSAST 406

Query: 404 NISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + S+   A++ L+ ER      K ++ AD IR++L + G +LED
Sbjct: 407 DSSLDADAVDALIAERAAAKADKNYARADGIREELTAAGIVLED 450


>gi|126735695|ref|ZP_01751440.1| cysteinyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126714882|gb|EBA11748.1| cysteinyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 477

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 191/387 (49%), Positives = 232/387 (59%), Gaps = 27/387 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT  RK  +F  IDP N+R+Y+CGPTVYD AHIGN RP +VFDVL+RLL+  YG  
Sbjct: 4   IRLNNTKTRKREDFIPIDPKNVRLYLCGPTVYDRAHIGNLRPSLVFDVLFRLLKEVYGPD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +         AI  IT++  Q +  D   +    PTH+PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAE------TGRAIGDITAETIQWYHDDLDAVGLQRPTHEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI QMI +I+ +I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATDHIAQMIAMIEVLIEKGHAYAAEGHVLFAVESYDAYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S    PGW SPWG GRPGWHIECSAMS   LG+ FDIHGGG DL FPH
Sbjct: 178 KRNPMDFVLWKPSGDGVPGWNSPWGYGRPGWHIECSAMSLELLGESFDIHGGGNDLQFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA    + A  W+HN  L +EG+KMSKS GNF TI +LL+      +  P 
Sbjct: 238 HENEIAQSACAHPTGEFARYWVHNEMLQVEGKKMSKSLGNFFTIRDLLD------QGVPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------DP 349
            VIRL ML THY + +D+T  R  EAE  L KW       G                 D 
Sbjct: 292 EVIRLVMLGTHYGKTMDWTETRRAEAEGTLRKWYGILQGHGFGPELIAALEAEGKWQPDA 351

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST 376
             +  L NDLNT  A+  LH LA+  T
Sbjct: 352 EFIGVLANDLNTSGALARLHVLAKGKT 378


>gi|291333822|gb|ADD93505.1| cysteinyl tRNA synthetase [uncultured marine bacterium
           MedDCM-OCT-S04-C13]
          Length = 458

 Score =  364 bits (935), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 194/468 (41%), Positives = 277/468 (59%), Gaps = 36/468 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L +    F  +DP  + MYVCGPTVY+F HIGNARP +VFD L+R+L+  Y +  V
Sbjct: 5   LYNSLTKAKQPFVPLDPERVTMYVCGPTVYNFVHIGNARPAVVFDTLFRVLQRLYPQ--V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y RNITDIDDKI+  A +      + + IS ++++  Q +  D + L CL P+  P AT
Sbjct: 63  VYARNITDIDDKIMNTAAE------LGEDISQLSTRFAQAYFDDMSALNCLEPSIVPYAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HIP+MI ++Q ++  GHAY A   ++F   S+ +YG+ S R +++   G RV    +K+
Sbjct: 117 AHIPEMISMVQRLVDKGHAYVAEGNVLFAVESMADYGALSGRSLEDMMAGARVEIASYKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
              DF+LWK ST  EPGW+SPWGRGRPGWH+ECSAM   +LG   DIH GG DLIFPHHE
Sbjct: 177 YAGDFVLWKPSTDHEPGWDSPWGRGRPGWHLECSAMIEKHLGVTIDIHAGGQDLIFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQSCCA   +  AN W+HNGF+N++G KMSKS GNF  +N+LL       + +P  V
Sbjct: 237 NEIAQSCCAHDGQPFANYWLHNGFINIDGEKMSKSLGNFRMVNDLL-------KQYPGEV 289

Query: 307 IRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPAVLS--ALYNDLN 360
           +R  +L +HYR   +F    L  A    + L         ++ +ID   +S  AL +DLN
Sbjct: 290 LRYVILSSHYRSEQNFGKDLLDSAWRSLDSLYGYLRGLPETEAVIDRDSISFKALLDDLN 349

Query: 361 TVSAIQALHKLARESTKNHD-----LLPIFNASAHILGI---------EVCKEHLNKNIS 406
           T  AI  L++LA+E     D     L       A ++G+         +  ++   ++IS
Sbjct: 350 TPVAISELYRLAKEMHTASDSEKAALHSELMGLAELMGLLQQDPEQWFKQSRDGEAESIS 409

Query: 407 IA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            A IE+L+ +R      K ++ AD +R+QL  +G +LED +   + +R
Sbjct: 410 EAEIERLIAKRQQAKADKDYAGADQVREQLLEQGVVLEDSREGTSWRR 457


>gi|329897619|ref|ZP_08272161.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328921107|gb|EGG28515.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 457

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 201/461 (43%), Positives = 274/461 (59%), Gaps = 37/461 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL RK   F+   P  + MYVCGPTVY+ AHIGNARP++VFDVL+RLL+  Y  +
Sbjct: 3   ITLYNTLARKKERFEPRVPGEVTMYVCGPTVYNLAHIGNARPVVVFDVLFRLLQTQY--Q 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKII  AR+        + I  +TS+ TQ+F +D   L  L PT +P 
Sbjct: 61  TVRYARNITDIDDKIITAARER------AEPIDAVTSEFTQKFREDVAALGTLPPTLEPH 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+++  MI +++ ++   HAYEA+  ++F  +S+PNYG  S R +D+   G RV    +
Sbjct: 115 ATHNLGPMIAMVEALLAKNHAYEADGHVLFSVTSMPNYGELSGRNLDDMLAGARVEVADY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   EPGWESPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIFPH
Sbjct: 175 KRHPGDFVLWKPAADDEPGWESPWGRGRPGWHLECSAMIHEHLGLEIDIHGGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSCCA         W+HN +++++G KMSKS GNF TI ELL   +        
Sbjct: 235 HENEIAQSCCA-YGGSYVRYWMHNAYIDIDGEKMSKSLGNFKTIRELLGLYR-------G 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTSKGIIDPAVL------SAL 355
            V+R A+L  HYR  ++F+ + L ++E  L+      +   S   + P  +      +AL
Sbjct: 287 EVLRFALLSAHYRSSLNFSKELLDQSENALNGLYNALRKVESVDAVGPESVEQESWYAAL 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGI------EVCKEHLNKN 404
            +D+NT  AI  LH+L  E  K  D     +     A A +LGI      +  +   ++ 
Sbjct: 347 CDDVNTPLAISELHQLISELNKADDSDKASIKGRILACASLLGILQSAPSDWLRGDDSEG 406

Query: 405 ISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +S  AI+ LV ER+     K ++ AD IR  L   G +LED
Sbjct: 407 LSAEAIDALVAERVEAKAAKNYARADEIRTVLTEAGVVLED 447


>gi|15603963|ref|NP_220478.1| cysteinyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226168|sp|Q9ZE62|SYC_RICPR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3860654|emb|CAA14555.1| CYSTEINYL-TRNA SYNTHETASE (cysS) [Rickettsia prowazekii]
 gi|292571677|gb|ADE29592.1| Cysteinyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 457

 Score =  363 bits (932), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 206/460 (44%), Positives = 277/460 (60%), Gaps = 28/460 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ +YNTL R    F   DP+NI+MYVCGPTVYD  HIGN+R ++V+D+LYR++   +G+
Sbjct: 2   KLHLYNTLTRTKEVFNPQDPANIKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIIIKIFGK 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YVRNITD+DDKII+RA  E   I IND    +T K T++F  +   L C+ PT +P
Sbjct: 62  KAVKYVRNITDVDDKIIDRA--ELLGITIND----LTDKVTREFHINMEYLGCMLPTIEP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++    G R+    
Sbjct: 116 KATEHIDVMIEIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEAMFEGVRIENSK 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            KKNP DF+LWK +   EP    + SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL
Sbjct: 176 TKKNPQDFVLWKPAKKNEPENINFTSPWGLGRPGWHIECSAMSYKYLGQNFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHH NEIAQS CA      A  WIHNGFL + G KMSKS GNFIT+ +L++ +  G  
Sbjct: 236 IFPHHTNEIAQSRCAFPSSTYAKYWIHNGFLTVNGSKMSKSLGNFITVRDLMDKQIQG-- 293

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLSALY 356
                V+RL +L +HYR P+D+  + + +A+  L  W       +  K  +    + +L+
Sbjct: 294 ----EVVRLFLLSSHYRRPLDYNDKAIDDAKKTLDYWYRAIEHINVQKVDLPSNFMRSLF 349

Query: 357 NDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI-----LGI--EVCKEHLNKNIS-I 407
           +D+NT  AI+ ++  A+       +    FNASA I     +G+  +   E  N+++   
Sbjct: 350 DDMNTPLAIKIINDYAKCVFISKTEAERKFNASAIITCANFIGLMRKTQYEWFNRDVDEF 409

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            I +L+ +RL   K K +  AD IR QL  K  ILED  N
Sbjct: 410 YINELINKRLKAKKQKNWLLADKIRNQLLEKKIILEDKSN 449


>gi|89069973|ref|ZP_01157305.1| cysteinyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044421|gb|EAR50552.1| cysteinyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 469

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 185/368 (50%), Positives = 232/368 (63%), Gaps = 14/368 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT  RK+  F  IDP+N+RMYVCGPTVYD AH+GNAR  +VFD+L+RLLR  YG  
Sbjct: 4   IQLRNTKSRKVEPFAPIDPTNVRMYVCGPTVYDRAHLGNARSAVVFDMLFRLLRQVYGAD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA +          I  IT + T  +  D   L  L PTH+PR
Sbjct: 64  AVTYVRNITDVDDKINARAAE------TGRTIRDITEETTGWYRDDMAALGVLRPTHEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M  +I  +I  G+AY A   ++F   S   YG  S R +D+   G RV    +
Sbjct: 118 ATEWIGAMKEMISTLIERGNAYAAEGHVLFAVESDGAYGGLSGRSVDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FPH
Sbjct: 178 KRDPMDFVLWKPSADDQPGWDSPWGRGRPGWHIECSAMSYELLGETFDIHGGGNDLMFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA      A  W+HN  L +EG+KMSKS GNF T+ +LLE      +  P 
Sbjct: 238 HENELAQSRCAHPEGGFARFWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------QGVPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--TSKGIIDPAVLSALYNDLNTV 362
            V+RL ML T Y +P+D+T ++   AE  L KW   +   + G +   VL+AL +DLNT 
Sbjct: 292 EVMRLVMLGTQYSKPMDWTEEKRASAEATLRKWRAMTEGVAPGEVAAPVLAALADDLNTA 351

Query: 363 SAIQALHK 370
            AI  LHK
Sbjct: 352 GAIAELHK 359


>gi|329113816|ref|ZP_08242587.1| Cysteinyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696826|gb|EGE48496.1| Cysteinyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 478

 Score =  363 bits (931), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 201/458 (43%), Positives = 272/458 (59%), Gaps = 35/458 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++++  R    F  IDP+++++Y CGPTVYD AHIGN R M+  DVL RLLR+ Y   
Sbjct: 34  LSLHDSQSRATVPFTPIDPAHVKVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHVYPR- 92

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITD+DDKI  RAR         + I  +T + T++F +D   +  L P  +PR
Sbjct: 93  -VTFVRNITDVDDKITARARAN------GEDIGSLTQRTTEEFHQDLASMNVLPPDIEPR 145

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I +M  +I  +I +GHAYEA   ++F   S P+YG+ S R  ++ + G RV    +
Sbjct: 146 ATHNIGEMQAMIARLIKNGHAYEAEGHVLFSVGSFPSYGALSGRNPEDLEAGARVEVAPY 205

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS  YLG  FDIHGGG DL+FPH
Sbjct: 206 KKAPGDFVLWKPSDADQPGWDSPWGRGRPGWHIECSAMSHRYLGDSFDIHGGGSDLLFPH 265

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS C     K AN W+HN  L +EG KMSKS GNF+TI ++L          PA
Sbjct: 266 HENERAQSMCCFPHGKFANYWVHNAMLLVEGEKMSKSLGNFLTIRDVLAQA-------PA 318

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSAL 355
             +RL +L  HYR  +++T   L EA   L ++         P+T   +G     VL AL
Sbjct: 319 EALRLLLLGAHYRSTLNYTQAGLQEARKTLDRFYRALAAGPVPKTDVPEG-----VLQAL 373

Query: 356 YNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGI-----EVCKEHLNKNISIAI 409
            +DLNT  AI  LH LA ++   +        A A +LG+     E   +    +   AI
Sbjct: 374 ADDLNTPKAIAELHALAAQALAGDRQAAGALKAGAGMLGLLQGDPEQWFKGDASDEDAAI 433

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           E L+ ERL   K + F+ AD +R QL+++G +LED K+
Sbjct: 434 EALINERLAARKARDFAKADALRDQLQAQGIVLEDTKD 471


>gi|254456599|ref|ZP_05070028.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083601|gb|EDZ61027.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 449

 Score =  362 bits (929), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 190/454 (41%), Positives = 270/454 (59%), Gaps = 25/454 (5%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I + N L  K  +F  +D  NI MYVCGPTVYD  HIGNARP+++FD+L+++L+  
Sbjct: 1   MGNDIFLTNNLSNKKEKFVPLDEKNIGMYVCGPTVYDDPHIGNARPIVIFDILFKVLKKK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    VTYVRNITD+DDKII+ +++++ SI      S +T    + F +D   L C  P+
Sbjct: 61  FSN--VTYVRNITDVDDKIIKSSKEKNISI------SDLTQTVIKSFNEDCNYLNCENPS 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            QP+AT HI  MI +I  +I  G AYE N  + F+     +YG  S +K+++   G+R+ 
Sbjct: 113 QQPKATEHIDLMIEMISELIKKGFAYENNQHVYFEVKKFDDYGKLSNKKLEDLIAGSRIE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKN  DF+LWK S   EP W+SPWG+GRPGWH+ECSAMS  +LG  FDIHGGG+DL
Sbjct: 173 VSDNKKNSEDFVLWKPSLDNEPAWDSPWGKGRPGWHLECSAMSKKFLGNEFDIHGGGIDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  AN W+HN F+ +   KM+KS GN + I +     K  G+
Sbjct: 233 IFPHHENEIAQSRCANDTDVFANYWLHNAFITMSNEKMAKSQGNILKIKDF--RNKVSGQ 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDL 359
                V+RLA++  HY++P+D+  + L + +  + KW      S   +D  ++  LY+D+
Sbjct: 291 -----VLRLALISAHYKQPLDWNDKLLEDCQNTIDKWYNVYLPSDNDLDEEIIQPLYDDI 345

Query: 360 NTVSAIQALHKLARESTKNHDL-LPIFNASAHILGI-----EVCKEHLNKNISIA---IE 410
           NT   I  LHKL  ++ K  +    IFN++ + +G+     EV   H    I I+   IE
Sbjct: 346 NTPGYIANLHKLYDKANKGDEKDKQIFNSACNFIGLLQETKEVWLNHKKDKIDISEEEIE 405

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +Q R      K +  AD IR  L  KG ++ED
Sbjct: 406 NKIQLRNTARANKDYKEADNIRDYLLDKGVLIED 439


>gi|146278108|ref|YP_001168267.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|187630856|sp|A4WU98|SYC_RHOS5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145556349|gb|ABP70962.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 486

 Score =  361 bits (927), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 197/469 (42%), Positives = 272/469 (57%), Gaps = 37/469 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT  R+   F  IDP+N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YG  
Sbjct: 4   IRLTNTKTRRKEAFTPIDPANVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGPD 63

Query: 65  CVTYVRNITDIDDKI---IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI    +  +       + + I   T +  + + +D   L  L PTH
Sbjct: 64  HVTYVRNFTDVDDKINAAAQARKAAGDPRSLEELIRARTDETIRWYHEDMDALGALRPTH 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT  I  MI +I++++  GHAYE    ++F   S  +YG+ S R +D+   G RV  
Sbjct: 124 EPRATEWIGAMIAMIEDLVARGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVEV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK S    PGWESPWGRGRPGWHIECSAMS   LG  FDIH GG+DL 
Sbjct: 184 APFKEDPMDFVLWKPSDDELPGWESPWGRGRPGWHIECSAMSYELLGASFDIHAGGIDLQ 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA      AN+W+HN  L + G+KMSKS GNF TI++L +      R 
Sbjct: 244 FPHHENEIAQSCCAHPEGGFANVWMHNEMLLVNGKKMSKSLGNFFTIHDLRKD-----RG 298

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------LSAL 355
            P  VIR+ +L THY +P+D+T ++  +A+  L KW + +     ++PA       L+AL
Sbjct: 299 IPGEVIRMVLLGTHYSKPMDWTAEKAAQAKATLWKWRKLTAD---VEPAASPDAAVLAAL 355

Query: 356 YNDLNTVSAIQALHKLA------------------RESTKNHDLLPIFNASAHILGIEVC 397
            +DLNT +AI  LH +A                   +  +   L P+    + ++ +   
Sbjct: 356 ADDLNTPAAITRLHSIAAQEDGALLKASASLLGLLEDDLRGWTLPPVTGTGSGVMEVSGS 415

Query: 398 KEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +  ++     IE+L+ ER      K F  +D IR  L   G I++D
Sbjct: 416 ATAIVGSVQYRETIERLLDERKQARMGKDFKRSDAIRDLLVGAGVIIKD 464


>gi|126462148|ref|YP_001043262.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|187630855|sp|A3PJH4|SYC_RHOS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126103812|gb|ABN76490.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 486

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 205/475 (43%), Positives = 277/475 (58%), Gaps = 47/475 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R+   F+ ID  N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3   EIRLTNTKTRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISII---TSKNTQQFVKDTTRLACLAPT 120
             VTYVRN TD+DDKI   A     +       ++I   T +  + + +D   L  L PT
Sbjct: 63  SHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRPT 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H+PRAT  I  MI +I+++I  GHAYE    ++F   S  +YG+ S R +D+   G RV 
Sbjct: 123 HEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVE 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG+DL
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGATFDIHAGGIDL 242

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQSCCA      A +W+HN  L ++GRKMSKS GNF TI++L +      R
Sbjct: 243 QFPHHENEIAQSCCAHPEGGFAKVWMHNEMLLVDGRKMSKSLGNFFTIHDLRKD-----R 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------VLSA 354
             P  VIR+ +L THY +P+D+T ++  +A+  L KW + +     ++PA      VL+A
Sbjct: 298 GIPGEVIRMVLLGTHYSKPMDWTAEKAAQAKATLWKWRKLTAD---VEPAGSPDAAVLAA 354

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI---EVCKEHLNKNISIA--- 408
           L +DLNT +AI  LH +A +         +  ASA +LG+   ++    L   I+ A   
Sbjct: 355 LADDLNTPAAITRLHSIAAQEDGA-----LLKASASLLGLLEDDLRGWTLPPAIATASNV 409

Query: 409 -------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                              IE+L+ ER      K F  +D IR  L   G I++D
Sbjct: 410 IEVSGSATAIVGTVPYRKTIERLLDERKQARLGKDFKRSDAIRDLLVGAGVIIKD 464


>gi|89054449|ref|YP_509900.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|109894905|sp|Q28QY7|SYC_JANSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88863998|gb|ABD54875.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 453

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 175/371 (47%), Positives = 238/371 (64%), Gaps = 17/371 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I + N+  RK+   Q I+P  + +Y+CGPTVYD AH+GNAR  +VFD L+RLLR+ YG 
Sbjct: 3   EIHLKNSKSRKVELLQPIEPGRVSLYLCGPTVYDRAHLGNARSAVVFDQLFRLLRHVYGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VT+VRN TD+DDKI  RA  E         I+ +T++ +Q ++ DT  L  L P H P
Sbjct: 63  ENVTFVRNFTDVDDKINARALAE------GREIADLTAETSQWYLDDTRALGVLDPNHMP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT +I +M+  I+++I  G AY  +   +F   S  +YG  S R +D+   G RV    
Sbjct: 117 RATEYIAEMVAFIEDLIAKGFAYARDGHALFRVRSFDDYGKLSGRSVDDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 177 YKEDPMDFVLWKPSSDDIPGWDSPWGRGRPGWHIECSAMAHALLGEQFDIHGGGADLMFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSC A      ANIW+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 237 HHENEVAQSCAAGH--GFANIWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 288

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTSKGIIDPAVLSALYNDLN 360
             VIR  ML THY +P+D+T ++  EAE  L KW    + S ++    P ++ +L +DLN
Sbjct: 289 GEVIRFVMLSTHYGKPMDWTEKKRAEAEATLRKWYAALRQSVAEQEATPHLVDSLADDLN 348

Query: 361 TVSAIQALHKL 371
           T  AI  LH +
Sbjct: 349 TALAITTLHGM 359


>gi|90021548|ref|YP_527375.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|109894935|sp|Q21JG6|SYC_SACD2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89951148|gb|ABD81163.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 459

 Score =  359 bits (922), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 198/475 (41%), Positives = 274/475 (57%), Gaps = 43/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  RK   F  ++P +I+MYVCGPTVY+  HIGNARP++VFDVL+R+L+  Y E 
Sbjct: 3   LTVYNTRTRKKEPFVPVNPQSIKMYVCGPTVYNLVHIGNARPVVVFDVLFRVLKTLYPE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKI++ A++        ++IS +T++ T+ +++D   L  L P+  P+
Sbjct: 62  -VVYARNITDIDDKIMKAAKEN------GESISALTARFTEAYIEDMAALHNLPPSIAPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  MI ++  ++  GHAYEA+  ++FD  S+ NYG  S R +++   G RV    +
Sbjct: 115 ATAHIEPMIAMVAALVEKGHAYEADGHVLFDVQSMKNYGKLSNRALEDMLDGARVEVADY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+   DF+LWK S   EPGW SPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIFPH
Sbjct: 175 KRYAGDFVLWKPSADDEPGWASPWGRGRPGWHLECSAMIETHLGNTIDIHGGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA   E+    W+HNG++N++G KMSKS GNF T+ +LL+  ++ G +   
Sbjct: 235 HENELAQSECAHGGEEYVRYWMHNGYVNIDGEKMSKSLGNFRTVRDLLQ--QYHGET--- 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQTSTSK-GIIDPAVLSALY 356
             IR A+L   YR  +DF+V  L +++         L   P TST    + D A   AL 
Sbjct: 290 --IRFALLSAQYRSELDFSVSLLDQSKAGLDTLYGALKNAPATSTDAVDLSDNAGYLALL 347

Query: 357 NDLNTVSAIQALHKLARESTKNHD-----------------LLPIFNASAHILGIEVCKE 399
           +DLNT   I  LH+LA+   KN                    L      A          
Sbjct: 348 DDLNTPQVIAELHRLAKIVNKNEGQEAAIAAAQLQALGGLLGLLQQEPEAWFKATTSGSS 407

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            L+      IE+L+ ER      K ++ AD IRK+L  KG  LED  +  + +R+
Sbjct: 408 ELSAE---DIEQLIVERKDAKLAKNYARADEIRKELTEKGIALEDSASGTSWKRI 459


>gi|73666934|ref|YP_302950.1| cysteinyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|109894899|sp|Q3YSF3|SYC_EHRCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72394075|gb|AAZ68352.1| cysteinyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 459

 Score =  359 bits (922), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 210/480 (43%), Positives = 277/480 (57%), Gaps = 49/480 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL      F  ++  NI++YVCGPTVY+F HIGNAR ++++DVL+RLL+  Y    V
Sbjct: 3   IYNTLTGIKEPFIPLNVDNIKVYVCGPTVYNFVHIGNARSIVIYDVLFRLLKLLY--PSV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII  A+    +I        +TS   + F +D   L CL PT++P+AT
Sbjct: 61  TYVRNITDIDDKIINVAQSNGQNI------CEVTSVYIKAFHEDMKMLNCLEPTYEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           ++I  MI LIQ +I HGHAY  N  + F+  S P+YG  S+R I E   G+RV  +  KK
Sbjct: 115 DNINVMINLIQKLIDHGHAYVDNATVFFNVESYPSYGQLSKRNIKELIYGSRVDIELGKK 174

Query: 187 NPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS  YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEVDNKLMSCWPSPWGLGRPGWHIECSAMSYCYLSENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA      A  WIHNGFL + G KMSKS GN +T+ +LLE+   G    
Sbjct: 235 PHHENEIAQSCCAFPGSYYAKYWIHNGFLTVNGEKMSKSLGNVLTVRQLLESGVKG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
              +IR  +L THYR+P+D+    L  A+  L++     +S  +         +   V+ 
Sbjct: 291 --ELIRYVLLNTHYRKPLDWFNMTLVSAQESLNRMYTALSSVNVDLSLDDDVELSSDVVD 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLL------PIFNASAHILGIEVCKEH------- 400
            L +D+NT  AI  LH++  E  K  D++           +A+ LGI    +H       
Sbjct: 349 CLKDDINTPKAISVLHEMVTEINKTSDVMKKTSLAKTLIKTANFLGI---LQHSWQDWFR 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +N+N    I+KL+ ER I      F  AD IR+ L SKG +L      DN    T W +K
Sbjct: 406 VNEN-DQEIDKLIDERRIARANNDFKKADDIRQLLLSKGIVLS-----DNKDGTTHWYKK 459


>gi|325926478|ref|ZP_08187798.1| cysteinyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325543127|gb|EGD14570.1| cysteinyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 476

 Score =  358 bits (920), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 200/496 (40%), Positives = 271/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L    P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVAPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I  GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATTHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------DPAVL-- 352
             P   +R A+L  HYR+P+D++   + +A+  L +   T      +      DPAV   
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDPAVSMT 345

Query: 353 ------SALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEHL---- 401
                 SAL +DLNT  A+  +  +A ++     DL+    ASA ++ +   +  L    
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAG 405

Query: 402 ------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|57239053|ref|YP_180189.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578996|ref|YP_197208.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819263|sp|Q5HBK5|SYC_EHRRW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57161132|emb|CAH58045.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417622|emb|CAI26826.1| Cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 457

 Score =  358 bits (920), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 200/461 (43%), Positives = 276/461 (59%), Gaps = 34/461 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R    F  +D +N+++YVCGPTVYDFAHIGN+R ++++D+L+RLL   Y +  V
Sbjct: 3   IYNTLTRSKELFVPLDVNNVKIYVCGPTVYDFAHIGNSRSIVIYDILFRLLNVLYPK--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY+RNITDIDDKII  A+        N  I  +T++  + F +D  RL CL PT++PRAT
Sbjct: 61  TYIRNITDIDDKIINVAQNN------NQNIYDVTARYIKAFNEDMGRLNCLKPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I  M+ LI+ +I +GHAY  +N + FD  S P YG  S R I E   G+R+  +  KK
Sbjct: 115 ENIDVMLALIEKLINYGHAYICDNTVFFDIESYPAYGKLSGRNIMELIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS +YLG+ FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATDIDNKLMSCWPSPWGVGRPGWHIECSAMSYNYLGENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQSCCA      A  WIHNGFL +   KMSKS GNF+T+ +LL++   G    
Sbjct: 235 PHHENELAQSCCAFPNSYYAKYWIHNGFLTVNHEKMSKSLGNFLTVRQLLDSGIRG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPA-----VLSA 354
              VIR   L THYR+P+D+    ++ A+  L++       +  + ++D       ++S 
Sbjct: 291 --EVIRYIFLSTHYRKPLDWNDNVVSNAQESLNRIYMALNVTDERLLLDDVEVSDEIISC 348

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGI--EVCKEHLNKNIS 406
           L +D+NT  AI  LH++     K  D+      + +   SA+ LGI     +E    +  
Sbjct: 349 LKDDMNTPKAIAVLHEMVTRINKASDIDKKVYFIKVLIKSANFLGILYHSWQEWFKVDND 408

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             I +L+ ER +      F  AD IR+ L  KG +L D K+
Sbjct: 409 QDIIQLIHERKMAKTNGDFRKADRIRQILLDKGIVLSDNKD 449


>gi|254480424|ref|ZP_05093671.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039007|gb|EEB79667.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 458

 Score =  358 bits (919), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 201/477 (42%), Positives = 279/477 (58%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+     EF+ +    + MYVCGPTVY+ AHIGNARP++VFD L+RLL+  YG  
Sbjct: 3   LKIYNTMSGAKEEFEPLVADTVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTQYG-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKII  A++   SI        +T + T ++ +D  +L  L P+ +P 
Sbjct: 61  SVTYARNITDVDDKIIAAAKEGDRSI------ESVTDEYTAKYREDMAQLNALPPSLEPH 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  MI L   +I  GHAYE+   ++F   S+ +YG  S R ID+   G RV    +
Sbjct: 115 ATHNIDAMIELTSTLIEKGHAYESQGHVLFAVESMEDYGKLSNRSIDDMLAGARVQVADY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   +PGW+SPWGRGRPGWH+ECSAM   +LG+  DIHGGG DLIFPH
Sbjct: 175 KRHPGDFVLWKPADITDPGWDSPWGRGRPGWHLECSAMIRAHLGETIDIHGGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   +     W+HN +L+++G KMSKS GNF T+ +LL+       S+  
Sbjct: 235 HENEIAQSRCAHGGDYV-KYWMHNAYLDIDGEKMSKSLGNFRTVRDLLQ-------SYRG 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSAL 355
            V+R A+L  HYR P++F+V+ L +A   L  +  T              + D     AL
Sbjct: 287 EVLRFALLSAHYRSPLNFSVELLEQARSNLDGFYGTLREVADMEIDVDVPLADEPFYQAL 346

Query: 356 YNDLNTVSAIQALHKLARESTKNH-----DLLPIFNASAHILGI--EVCKEHLN------ 402
            +DLNT  AI  LH LA++  K        L     A+ ++LGI  +  +E L       
Sbjct: 347 NDDLNTPLAIAELHALAKQLNKAAAEDKPQLKARIIAAGNLLGILGQDPEEWLQGDAAAD 406

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              + AIE L+QER+     + F+ AD IR  L ++G +LED +        T+WK+
Sbjct: 407 AISAEAIETLIQERVDAKANRNFARADEIRDSLLAEGVVLEDSREG------TQWKR 457


>gi|294624692|ref|ZP_06703360.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601000|gb|EFF45069.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 476

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 200/496 (40%), Positives = 274/496 (55%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKG-------I 346
             P   +R A+L  HYR+P+D++   + +A+  L +   T        T  G        
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALETESGGDVAISKT 345

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEH-LNKN 404
           I   V SAL +DLNT  A+  +  +A ++     +L+    ASA +  ++  +   L   
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSELMHSGQASARMAQLQAARAKLLGAG 405

Query: 405 ISIA---------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +++                      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 VALGLLQQDPAAWFSRGTDVGDDARITALVEERSAAKKAKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|58617054|ref|YP_196253.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311364|sp|Q5FHI9|SYC_EHRRG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58416666|emb|CAI27779.1| Cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 457

 Score =  358 bits (918), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 200/461 (43%), Positives = 276/461 (59%), Gaps = 34/461 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R    F  +D +N+++YVCGPTVYDFAHIGN+R ++++D+L+RLL   Y +  V
Sbjct: 3   IYNTLTRSKELFVPLDVNNVKIYVCGPTVYDFAHIGNSRSIVIYDILFRLLNVLYPK--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY+RNITDIDDKII  A+        N  I  +T++  + F +D  RL CL PT++PRAT
Sbjct: 61  TYIRNITDIDDKIINVAQNN------NQNIYDVTARYIKAFNEDMGRLNCLKPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I  M+ LI+ +I +GHAY  +N + FD  S P YG  S R I E   G+R+  +  KK
Sbjct: 115 ENIDVMLALIEKLINYGHAYIRDNTVFFDIQSYPAYGKLSGRNIMELIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS +YLG+ FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATDIDSKLMSCWPSPWGVGRPGWHIECSAMSYNYLGENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQSCCA      A  WIHNGFL +   KMSKS GNF+T+ +LL++   G    
Sbjct: 235 PHHENELAQSCCAFPNSYYAKYWIHNGFLTVNHEKMSKSLGNFLTVRQLLDSGIRG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPA-----VLSA 354
              VIR   L THYR+P+D+    ++ A+  L++       +  + ++D       ++S 
Sbjct: 291 --EVIRYIFLSTHYRKPLDWNDNVVSSAQESLNRIYMALNVTDERLLLDDVEVSDEIISC 348

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGI--EVCKEHLNKNIS 406
           L +D+NT  AI  LH++     K  D+      + +   SA+ LGI     +E    +  
Sbjct: 349 LKDDMNTPKAIAVLHEMVTRINKASDIDKKVYFIKVLIKSANFLGILHHSWQEWFKVDND 408

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             I +L+ ER +      F  AD IR+ L  KG +L D K+
Sbjct: 409 QDIIQLIHERKMAKTNGDFIKADRIRQILLDKGIVLSDNKD 449


>gi|91763128|ref|ZP_01265092.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717541|gb|EAS84192.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 451

 Score =  357 bits (917), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 189/452 (41%), Positives = 272/452 (60%), Gaps = 25/452 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I + N L+ K  +F  I+  NI MYVCGPTVYD  HIGNARP+++FD+L+++L+  YG  
Sbjct: 3   IFLTNNLKNKKEKFVPINKENIGMYVCGPTVYDNPHIGNARPLVIFDILFKVLKSKYGHD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y+RNITD+DDKII+ A++++ SI      S +T+   + F  D   L    PT QP+
Sbjct: 63  KINYIRNITDVDDKIIKSAKEKNLSI------SELTNNVIKDFNDDCNYLNLDNPTQQPK 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  MI +I  +I    AYEANN + F+ S   +YG  S +K+++   G+RV    +
Sbjct: 117 ATDHIDLMIKMISTLIEKDFAYEANNHVYFEVSKFDDYGKLSNKKLEDLIAGSRVEVSDN 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK   DF+LWK S   EP W+S WG+GRPGWH+ECSAMS  YLG VFDIHGGG+DLIFPH
Sbjct: 177 KKKSEDFVLWKPSKDDEPSWDSSWGKGRPGWHLECSAMSKKYLGNVFDIHGGGIDLIFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA+  +  AN WIHN F+ +   KM+KS GN + I +  +           
Sbjct: 237 HENEIAQSRCANDSKVFANYWIHNAFITMSNEKMAKSTGNILKIKDFKDNV-------DG 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYNDLNT 361
            V++LA++  HY++P+D+  + L + +  + KW +       K ++D  +LS LY+DLNT
Sbjct: 290 QVLKLALMSAHYKQPLDWNEKLLEDCKNTIDKWYEVYLPPKDKIVLDEDILSPLYDDLNT 349

Query: 362 VSAIQALHKLARESTK-NHDLLPIFNASAHILGI-----EVCKEHLNKNISI---AIEKL 412
              I  LH+L  ++ K  ++   +F  + + +GI     E   E   K  SI    I ++
Sbjct: 350 PGYIAKLHQLYDKALKGGNEEKSLFVLACNFIGILNKTKEEWIEFKKKKSSINEDDILEM 409

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +  R    + K +  AD IR +L  KG ++ED
Sbjct: 410 ISLRNKAREDKNYKEADIIRDKLLDKGVLIED 441


>gi|294665915|ref|ZP_06731181.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604319|gb|EFF47704.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 476

 Score =  357 bits (916), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 200/496 (40%), Positives = 273/496 (55%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I  +I +GHAY A   ++F  SS   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIDQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKG-------I 346
             P   +R A+L  HYR+P+D++   + +A+  L +   T        T  G        
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALETESGGDVAISKT 345

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEH-LNKN 404
           I   V SAL +DLNT  A+  +  +A ++     +L+    ASA +  ++  +   L   
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSELMHSGQASARMAQLQAARAKLLGAG 405

Query: 405 ISIA---------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +++                      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 VALGLLQQDPAAWFSRGTDVGDDARITALVEERSAAKKAKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|90415956|ref|ZP_01223889.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90332330|gb|EAS47527.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 450

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 197/463 (42%), Positives = 265/463 (57%), Gaps = 42/463 (9%)

Query: 18  FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           FQ ID   + MYVCGPTVY+  HIGNARP +VFD LYRLL   Y    V Y RNITDIDD
Sbjct: 8   FQPIDSQRVTMYVCGPTVYNRVHIGNARPAVVFDTLYRLLTSLY--PNVQYARNITDIDD 65

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KI++ A +      + + IS+++++  + +  D   L  L PT  P AT HIP+M  +I 
Sbjct: 66  KIMKTAAE------LGEDISVLSTRYAEAYFDDMQALNNLPPTIVPYATQHIPEMTDMIS 119

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            ++   HAYE+   ++F   S+ +YG  S R +D+   G RV    +KK   DFILWK S
Sbjct: 120 RLVAKEHAYESEGHVLFAVQSMADYGKLSGRSLDDMLAGARVEVASYKKYAGDFILWKPS 179

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
              EPGW+SPWGRGRPGWH+ECSAM   +LG+  DIHGGG DLIFPHHENEIAQSCCA  
Sbjct: 180 ADDEPGWDSPWGRGRPGWHLECSAMIEKHLGESIDIHGGGQDLIFPHHENEIAQSCCAHD 239

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            +  AN+W+HNGF+N+EG KMSKS GNF  +N+LLE        +P  V+R  +L  HYR
Sbjct: 240 GKPVANVWMHNGFINIEGEKMSKSLGNFRMVNDLLE-------QYPGEVLRYVILSAHYR 292

Query: 318 EPIDFTVQRLTEA--------EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
              +F    L  A          L ++    + +  I D    +AL +DLNT  AI  LH
Sbjct: 293 SEQNFGKDLLDSAWRSLDAIYGFLRTQVGIEAAAVDIADTHAYAALLDDLNTPVAISELH 352

Query: 370 KLARE-STKNHDLLPIFN----ASAHILGI-----EVCKEHLNKNISIA---IEKLVQER 416
           K ARE +  + D L        A A ++G+     E    H      I+   IE L+ +R
Sbjct: 353 KFAREMNAADGDALAEAKGRLLAVAGLMGLLQQDPEQWFTHSRGGSDISAEEIEVLIAKR 412

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 K ++ AD +R++L++ G +LED +        T+W++
Sbjct: 413 NQAKADKDYAGADGVREELKAMGVVLEDSREG------TKWRR 449


>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 472

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 208/478 (43%), Positives = 273/478 (57%), Gaps = 55/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +  EF+ ++   ++MYVCGPTVYD AHIG+AR  +VFDV+ R L Y  G +
Sbjct: 2   IKVTNTLTERKEEFKPLEGKTVKMYVCGPTVYDHAHIGHARSAVVFDVIRRWLEYR-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRN TD+DDKII+R+++E   IP  +    ++ K    + +D   L    PT++P+
Sbjct: 61  VI-FVRNYTDVDDKIIKRSKEE--GIPWYE----VSKKYIASYEEDMEALNVKEPTYKPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I +I  +I  GHAYEA+ ++ F   S P YG  S+RK +E   G RV     
Sbjct: 114 VTEHIREIIEMIDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKTEELLAGARVEPGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+S   EPGWESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 174 KKNPLDFALWKKSKEGEPGWESPWGVGRPGWHIECSAMSMKYLGETIDIHGGGFDLIFPH 233

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT A  WIHNGF+ +   KMSKS GNF TI E+L       + + 
Sbjct: 234 HENEIAQSESY--TGKTFARYWIHNGFVMVNREKMSKSLGNFFTIKEIL-------KQFS 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL-------------SKWPQTSTSKGIIDPA 350
              +RL +L THYR PIDFTV+RL EAE  L              K P+       ID  
Sbjct: 285 PDTLRLFLLSTHYRSPIDFTVERLKEAERALKRLTTFIESVKAVEKLPEEGEKGEPIDVE 344

Query: 351 VL-----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPI----------FNAS 388
                  +A+ +D NT  A+ AL++L +       ++ K   + P           F  +
Sbjct: 345 SARREFEAAMDDDFNTAKALGALYELVKRANTLKDKALKRQKITPSERESLVDAARFTEN 404

Query: 389 A-HILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   LG ++ +E     +  A IE L+Q R  L K K+F  AD IR +L+  G  LED
Sbjct: 405 ALKTLGFKLEREQSEGGLEEALIELLIQVRGELRKKKEFQLADLIRDRLKELGITLED 462


>gi|289671266|ref|ZP_06492341.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 476

 Score =  357 bits (915), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 200/496 (40%), Positives = 274/496 (55%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++NTL R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNTLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLSALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +      N  IS IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ------NVPISTITDRFAAIYRQDMAALGVMPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      +D            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALDADGGSDVGSSKT 345

Query: 349 -PA-VLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAHILGIE 395
            PA V +AL +DLNT  A+  +  +A E+    + L            +    A +LG  
Sbjct: 346 IPAEVEAALDDDLNTPLALSVIASIAAEARALRNELVHGGEPLGRMNELHAVRAKLLGAG 405

Query: 396 VCKEHLNKNIS------------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +    L ++ +              I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFARGTDAGDDARITALVEERNAAKKAKDFARADAIRKQLADQGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|78048109|ref|YP_364284.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|109894961|sp|Q3BSH9|SYC_XANC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78036539|emb|CAJ24230.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 476

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 199/496 (40%), Positives = 272/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I  GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDLAVSMT 345

Query: 349 -PA-VLSALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEHL---- 401
            PA V SAL +DLNT  A+  +  +A ++     DL+    ASA ++ +   +  L    
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAG 405

Query: 402 ------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|289207861|ref|YP_003459927.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943492|gb|ADC71191.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 474

 Score =  356 bits (914), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 191/483 (39%), Positives = 283/483 (58%), Gaps = 44/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++ ++NTL  +   F+  DP  + +YVCGPTVY+  H+GN RP++VFDVL+R+LR  YG
Sbjct: 7   RELILHNTLGGRDEPFRPQDPERVTLYVCGPTVYNRVHVGNGRPVVVFDVLFRVLRELYG 66

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITD+DDKI + A +        + I+ +T + T+ F +D   L  L PT +
Sbjct: 67  PEHVIYARNITDVDDKINKAAAEN------GEPIAALTERYTRAFHEDIAELGTLPPTLE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI  MI LI+ +I  GHAY A   ++FD +S P+YG+ S R +++ + G RV   
Sbjct: 121 PRATDHIQPMIELIERLIERGHAYPAEGHVLFDVTSYPDYGALSGRTLEDMQAGARVEVA 180

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK +   EPGW+S WG GRPGWH+EC+AM   +LG + DIHGGG DL+F
Sbjct: 181 RYKRHPGDFVLWKPAAEGEPGWDSLWGYGRPGWHLECTAMIRSHLGAMIDIHGGGHDLVF 240

Query: 243 PHHENEIAQSC----CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           PHHENEIAQ C    C +     A  W+HNG + ++G KMSKS GNF  +++LL+     
Sbjct: 241 PHHENEIAQGCAAEGCTEHGTYYARYWVHNGHVTIDGEKMSKSLGNFQLLHDLLQ----- 295

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
             +WP  V+R+A+L  HYR P++F+   LT++   L+   +       ++PA        
Sbjct: 296 --AWPGEVLRMALLSRHYRAPLNFSEDTLTQSRNALNGLYRVLRDHADVEPAPVNAADTP 353

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE-------VC 397
           V +AL +DLNT   I ALH+LA       D      L     A A +LG+          
Sbjct: 354 VFTALLDDLNTPGGITALHRLADALAAAGDPAERARLKGELTAGAGLLGLLQQDPTAWFQ 413

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +  +  ++  +E+ +  R    K + F++AD IR +L ++G  LED   P+     TRW
Sbjct: 414 GDGEDPGLAAWVEERIAARQAARKNRDFATADAIRDELTARGIELED--TPEG----TRW 467

Query: 458 KQK 460
           ++ 
Sbjct: 468 QRS 470


>gi|289665721|ref|ZP_06487302.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 476

 Score =  356 bits (914), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 200/496 (40%), Positives = 274/496 (55%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++NTL R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNTLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLSALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +      N  IS IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ------NVPISTITDRFAAIYRQDMAALGVMPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      +D            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALDADGGSDVGSSKT 345

Query: 349 -PA-VLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAHILGIE 395
            PA V +AL +DLNT  A+  +  +A E+    + L            +    A +LG  
Sbjct: 346 IPAEVEAALDDDLNTPLALSVIASIAAEARALRNELVHGGEPLGRMNELHAVRAKLLGAG 405

Query: 396 VCKEHLNKNIS------------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +    L ++ +              I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERNAAKKAKDFARADAIRKQLADQGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|71083835|ref|YP_266555.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|109894918|sp|Q4FLI7|SYC_PELUB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71062948|gb|AAZ21951.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 453

 Score =  356 bits (914), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 188/456 (41%), Positives = 273/456 (59%), Gaps = 25/456 (5%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K I + N L  K  +F  I+  NI MYVCGPTVYD  HIGNARP+++FD+L+++L+  
Sbjct: 1   MNKDIFLTNNLNNKKEKFVPINKENIGMYVCGPTVYDNPHIGNARPLVIFDILFKVLKSK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y+RNITD+DDKII+ A++++ SI      S +T+   + F  D   L    P+
Sbjct: 61  YGHDKINYIRNITDVDDKIIKSAKEKNLSI------SELTNNVIKDFNDDCNYLNLDNPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            QP+AT+HI  MI +I  +I    AY  N+ + F+ S   +YG  S +K+++   G+RV 
Sbjct: 115 QQPKATDHIDLMIKMISTLIEKDFAYVVNDHVYFEVSKFDDYGKLSNKKLEDLIAGSRVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KK   DF+LWK S   EP W+SPWG+GRPGWH+ECSAMS  YLG VFDIHGGG+DL
Sbjct: 175 VSDNKKKSEDFVLWKPSKDDEPSWDSPWGKGRPGWHLECSAMSKKYLGNVFDIHGGGIDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  AN WIHN F+ +   KM+KS GN + I +  +       
Sbjct: 235 IFPHHENEIAQSRCANDSKVFANYWIHNAFITMSNEKMAKSTGNILKIKDFKD------- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYN 357
           +    V++LA++  HY++P+D+  + L + +  + KW +       K ++D  +LS LY+
Sbjct: 288 NVDGQVLKLALMSAHYKQPLDWNEKLLEDCKNTIDKWYEVYLPPKDKIVLDEDILSPLYD 347

Query: 358 DLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGI-----EVCKEHLNKNISI---A 408
           DLNT   I  LH+L  ++ K  ++   +F  + + +GI     E   E   K  SI    
Sbjct: 348 DLNTPGYIAKLHQLYDKALKGGNEEKSLFVLACNFIGILNKTKEEWIEFKKKKSSINEDD 407

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I +++  R    + K +  AD IR +L  KG ++ED
Sbjct: 408 ILEMISLRNKAREDKNYKEADIIRNKLLDKGVLIED 443


>gi|114797963|ref|YP_761876.1| cysteinyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027646|sp|Q0BXB7|SYC_HYPNA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114738137|gb|ABI76262.1| cysteinyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 461

 Score =  355 bits (912), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 193/465 (41%), Positives = 269/465 (57%), Gaps = 41/465 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T  RK   F+  D   + +YVCGPTVY++AHIGNARP +VFDVL R+L   YGE 
Sbjct: 3   LRIYDTAARKKRVFEPQDAKRVTLYVCGPTVYNYAHIGNARPPVVFDVLRRVLMARYGED 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y RNITDI+DKII        S+   + IS IT K    +  D   L  +APT +P 
Sbjct: 63  AIVYARNITDIEDKIIA------ASVASGEPISAITQKYAAIYNADVEALNVIAPTIEPW 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+MI +I+ +I   +AY  +  + F   S+P+YG  S RK ++ + G RV     
Sbjct: 117 ATGHVPEMIEIIEKLIRKKYAYVGDTGVWFSVPSMPDYGRLSGRKPEDNEAGARVAVDED 176

Query: 185 KKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           K++P+DF LWK + P EP    W+SPWGRGRPGWHIECSAM++ +LG+  DIHGGG+DL 
Sbjct: 177 KRDPSDFALWKFAKPGEPEDAIWDSPWGRGRPGWHIECSAMAAKHLGRTIDIHGGGVDLT 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   E+ A  W+HNGFL++ G KMSKS GN +T+++LL       ++
Sbjct: 237 FPHHENEIAQSECA-HGEELARYWMHNGFLDMGGEKMSKSLGNVVTVHDLL-------KA 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------WPQTSTSKGIIDPAVLS 353
           WP  V+R A+L  HYR  +D+T   L +A+  L +        W          D  VL 
Sbjct: 289 WPGEVLRFALLTAHYRAQLDWTEDLLKQAKTTLDRIYGALRRVWEADGGEA--RDTGVLR 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---LPIFNASAHILGIEVC-----------KE 399
           AL +DL T  A+  L +LA E+    DL   + + N  A++L                ++
Sbjct: 347 ALEDDLGTPDALAELARLASEANTAADLKDAVAMANGRANLLAAGKLLGLLTKTPKEWEQ 406

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + + +  I+  VQ R+     K ++ AD IRK L  +G  + D
Sbjct: 407 GADTDENSRIDAQVQARVDARVAKDWAEADRIRKALAEEGVEIMD 451


>gi|119505713|ref|ZP_01627782.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458423|gb|EAW39529.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 458

 Score =  355 bits (911), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 192/463 (41%), Positives = 270/463 (58%), Gaps = 39/463 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++  NTL  +   F+  DP+ I +YVCGPTVY+ AHIGNARP++ FD+LYR+LR  Y  
Sbjct: 3   ELRFTNTLTGQKEVFEPRDPNRITLYVCGPTVYNLAHIGNARPVVTFDMLYRVLRALY-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITDIDDKII  AR+       N+ I  +T + T ++ +D  +L  L+P  +P
Sbjct: 61  PTVVYARNITDIDDKIIAAARER------NEGIDAVTKEFTDKYREDMAQLNALSPDLEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT +I  M  LI  +I  GHAY A   ++FD +S+P+YG+ S R +++   G RV    
Sbjct: 115 RATENIKPMCDLITQLIARGHAYAAEGHVLFDVTSMPSYGALSGRNLEDMLAGARVEVAD 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S   EPGW+SPWG GRPGWH+ECSAM   +LG   DIHGGG DLIFP
Sbjct: 175 YKRSPGDFVLWKPSAEDEPGWDSPWGWGRPGWHLECSAMIRAHLGDAIDIHGGGRDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQSCC          W+HN +++++G KMSKS GN  T+ +LL         +P
Sbjct: 235 HHENERAQSCCG-YGGDFVRYWLHNAYVDMDGEKMSKSLGNVRTVRDLLGL-------YP 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLSAL 355
             V+R A+L THYR P++F+ + L  A++ L+ + Q   +   I        D    +AL
Sbjct: 287 GEVLRFALLSTHYRSPLNFSGEVLDNAKLTLNSFYQALRNTSDICPEDVRPEDTLAFTAL 346

Query: 356 YNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
            +DLNT  AI ALH   +          +T   +LL +      +LG +  +     + S
Sbjct: 347 LDDLNTPKAIAALHASCKALNKADAKTAATCKGELLAMGRLMG-LLGSDPEQWFTESSSS 405

Query: 407 IA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            A     IE+ +  RL     K F++AD +R +L++ G  LED
Sbjct: 406 AALTPEDIEQRLAARLEARARKDFAAADAVRDELQAAGIELED 448


>gi|296115000|ref|ZP_06833644.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978462|gb|EFG85196.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 452

 Score =  355 bits (911), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 196/469 (41%), Positives = 268/469 (57%), Gaps = 35/469 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ ++++  RK   F  +DP N+R+Y CGPTVYD AHIGN R M+  DVL RLLR+ Y  
Sbjct: 3   RLSLHDSKSRKTVAFTPLDPENVRVYYCGPTVYDLAHIGNLRAMVTADVLVRLLRHLYPH 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI  RAR+       N+ I+ +T++    F +D   ++ L P  +P
Sbjct: 63  --VTYVRNITDVDDKINARAREN------NEPITALTARTIHDFHQDLAAVSILPPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+HI QM  +I  +I +GHAYEA   ++F  +   +YG  S R  D+   G RV    
Sbjct: 115 RATHHIEQMQRMISELIDNGHAYEAEGHVLFSVADYSDYGGLSGRSADDLMAGARVDVAD 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+ P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS HYLG+ FDIHGGG DL+FP
Sbjct: 175 YKRAPGDFVLWKPSDVDTPGWDSPWGRGRPGWHIECSAMSYHYLGESFDIHGGGSDLLFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS C     + AN W+HN  L ++G KMSKS GNF+T+ ++L       R  P
Sbjct: 235 HHENERAQSMCCHPHGRFANHWVHNAMLLVDGEKMSKSLGNFLTVRDVL-------RDTP 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDP--AVLSAL 355
           A  +RL +L   YR  ++FT   L +A   L ++ +         + G   P    + AL
Sbjct: 288 AEALRLLLLRAQYRSVLNFTRDGLDDARQTLDRFYRALAMLNDGDAAGTTPPPDVFVRAL 347

Query: 356 YNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHL----NKNISIA-I 409
             DLNT +AI  +H +A R    +        A+  ++G+           +  +  A I
Sbjct: 348 CEDLNTPAAIAEMHAMANRALAGDAQAARDLRAAGRLIGLLGSTPDTWFRGDAQLDTAKI 407

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + L+ ERL   K + F+ AD IR +L  +G  LED      G   T W+
Sbjct: 408 QALIDERLAARKARDFARADAIRDELAQQGIALED------GPGGTTWR 450


>gi|330819286|ref|YP_004348148.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327371281|gb|AEA62636.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 476

 Score =  354 bits (909), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 198/492 (40%), Positives = 269/492 (54%), Gaps = 58/492 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I++Y+TL R+    +   P    MYVCGPTVY+FAHIGNARP +VFDVL RLLR+ 
Sbjct: 1   MSDAIRLYDTLTRRKEVLRTSRPDRATMYVCGPTVYNFAHIGNARPAVVFDVLARLLRHD 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y E  + Y RN TD+DDKI   A     ++PI      IT +    + +D   L  LAP 
Sbjct: 61  YRE--LVYARNFTDVDDKI--NAAAAAAALPIG----AITERYIAAYHEDMQALGVLAPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP+++ LI+ +I  GHAY A   ++F   S  +YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPEIVALIETLIARGHAYVAQGHVLFHVPSYADYGQLSGRRTEDMIAGARVE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK STP  PGW+SPWGRGRPGWH+EC+AM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTPELPGWDSPWGRGRPGWHVECTAMIGRHLGHTIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  CA         W+HN F+ ++G+KMSKS GN + + ELL        
Sbjct: 233 IFPHHENEIAQGSCAHD-ALYCRTWVHNSFVTVDGQKMSKSLGNVLLVRELLAEA----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPA------ 350
             P   IR A+L THYR P+ +  +RL +A   L++W           G   PA      
Sbjct: 287 --PGEAIRFALLATHYRNPLHWNARRLAQARQTLTRWYGALACVEAHDGGPAPAQAVEPD 344

Query: 351 --VLSALYNDLNTVSAIQALHKL------ARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
             VL+AL +DLN   AI  LH+L      A +  +  +     + SA +LG+   ++H  
Sbjct: 345 ALVLAALRDDLNVPLAISRLHELVSQLAHATDPDEQREAAARLHTSAALLGL--LRQHAP 402

Query: 403 KNISIA----------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             ++                   E LV ER    + + F+ AD +R+QL+  G +LED  
Sbjct: 403 SALAALRHQSRDPRHASLTPERAEALVAERDAARQRRDFARADALRQQLDHGGVLLEDTP 462

Query: 447 NPDNGQRMTRWK 458
           +       TRW+
Sbjct: 463 H------GTRWR 468


>gi|42520052|ref|NP_965967.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|99036051|ref|ZP_01315087.1| hypothetical protein Wendoof_01000057 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|59798568|sp|Q73IL1|SYC_WOLPM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|42409789|gb|AAS13901.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 457

 Score =  354 bits (909), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 202/477 (42%), Positives = 281/477 (58%), Gaps = 45/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFTPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  I++  T+ F +D   + C  PTH+P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESISTYYTKAFHEDMRSINCAEPTHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATKNVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  WIHNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAGSMFAKYWIHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAV 351
                VIR A+L THYR+P+D+T   +++A+  L+K+ + S          S   I    
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDF 347

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLNKNI 405
           + AL NDLN   A+  LH++A +  K  +      L   F  SA  +G+   +    K  
Sbjct: 348 IDALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGL--LESSYEKWF 405

Query: 406 SI-----AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           ++      IE+L+  R I  K K + +AD IR QL+  G  +      DN    T W
Sbjct: 406 AVDVNHQEIERLIDLRKIAKKNKNYDTADKIRDQLKQMGITI-----SDNEDGTTTW 457


>gi|166712436|ref|ZP_02243643.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 476

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 199/496 (40%), Positives = 273/496 (55%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGI----- 346
             P   +R A+L  HYR+P+D++   + +A+  L +   T           S G+     
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEACGSSGVEVSKT 345

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEH----- 400
           I   V SAL +DLNT  A+  +  +A E+    ++L+    +SA +  +   +       
Sbjct: 346 IPVEVESALEDDLNTPLALSVIASIASEARALRNELVHAGESSARMSELHAVRAKLLGAG 405

Query: 401 -----------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             +      I  LVQER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDAGDDARITALVQERSAAKKGKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|167907149|ref|ZP_02494354.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 471

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 261/473 (55%), Gaps = 46/473 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I ++NTL R+    Q   P  + MYVCGPTVY++AHIGNARP +VFDVL RLLR+ 
Sbjct: 1   MNLPIYLHNTLTRRKEPLQTTTPDRVTMYVCGPTVYNYAHIGNARPAVVFDVLSRLLRHD 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y +  V Y RN TD+DDKI   A      +PI      IT +    +  D   L  L+P 
Sbjct: 61  YPQ--VVYARNFTDVDDKI--NAAAVAAGVPIG----TITDRYIDAYHADMQALGVLSPE 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP +I LI+ ++  GHAY     ++F   S P YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPAIIELIETLLARGHAYVVQGHVLFHVPSYPEYGHLSGRRTEDMLAGARVE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK STP  PGW+SPWGRGRPGWH+ECSAM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTPDLPGWDSPWGRGRPGWHVECSAMIGQHLGHTIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  CA         W+HN F+ ++G+KMSKS GN + + +LL        
Sbjct: 233 IFPHHENEIAQGTCAHGT-LYCRTWVHNSFVTVDGQKMSKSLGNVLLVRDLLAQA----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVL 352
             P   IRLA+L THYR P+D+  QRL+ A   L+++ ++ +    +        DP +L
Sbjct: 287 --PGEAIRLALLSTHYRRPLDWNAQRLSAARQTLTRYYESLSKVAQVAVVPQIAADPQLL 344

Query: 353 SALYNDLNTVSAIQALHKLA-------RESTKNHDLLPIFNASAHILGI-----EVCKEH 400
            AL NDLN   A+  LH L         ++ + H    +   SA +LG+     +     
Sbjct: 345 EALRNDLNVPGALVRLHVLLTVLDDADTDAERAHAKSALLT-SAALLGLLQQPPQAALAQ 403

Query: 401 LNKNISIA---------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L                I+ L+ ER    + + F+ AD +R+ LE+ GF +ED
Sbjct: 404 LRPAAPATAVQGLGDTRIKALLAEREQARRDRDFAKADALRETLEAAGFTIED 456


>gi|91206096|ref|YP_538451.1| cysteinyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157826471|ref|YP_001495535.1| cysteinyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|109894934|sp|Q1RH02|SYC_RICBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166225304|sp|A8GUK2|SYC_RICB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91069640|gb|ABE05362.1| Cysteinyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157801775|gb|ABV78498.1| cysteinyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 458

 Score =  354 bits (908), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 201/461 (43%), Positives = 280/461 (60%), Gaps = 29/461 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I ++NTL +    F+  D +N++MYVCGPTVYD  HIGN+R ++V+D+LYR+L   +  
Sbjct: 2   QIYLFNTLTQNKELFEPEDQTNVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRILVDIFEA 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YVRNITD+DDKIIERA   +  I IN+    +T K T++F  +   L CL PT +P
Sbjct: 62  KSVKYVRNITDVDDKIIERA--ANLGISINE----LTDKVTKEFHTNMKYLFCLPPTIEP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT HI  MI +I+ +I  GHAY A++ + FD    PNY   S RK+++     RV    
Sbjct: 116 KATQHIDVMIEIIEKLIKSGHAYIADDHVYFDVLLAPNYTELSNRKLEDMFESVRVENSK 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            KK+P DF+LWK + P E     ++SPWG GRPGWHIECSAMS  YLGK FDIHGGG DL
Sbjct: 176 TKKHPQDFVLWKPAKPDEDVHMNFKSPWGLGRPGWHIECSAMSYKYLGKNFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++ K+  G 
Sbjct: 236 IFPHHTNEIAQSKCAFSNSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD-KQIKGE 294

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----IDPAVLSAL 355
                ++RL +L  HYR P+D+  + + +A+  L  W +   +  I     +    + +L
Sbjct: 295 -----IVRLFLLTAHYRRPLDYNDKAIEDAKKTLDYWYRAIQNINIQKIDTLPSDFMQSL 349

Query: 356 YNDLNTVSAIQALHKLARE-STKNHDLLPIFNAS-----AHILGI--EVCKEHLNKNISI 407
           ++D+N+  AI+ ++  A+   T  ++    FNAS     A+ +G+  E   E  NK++  
Sbjct: 350 FDDMNSPLAIKIINDYAKAIFTATNEEEKQFNASNLIACANFIGLMNETPHEWFNKDVDE 409

Query: 408 A-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             I  L+ ERL   K K +  AD IR +L ++  ILED  N
Sbjct: 410 NYINNLINERLEAKKQKNWGLADQIRNKLLNEKIILEDKPN 450


>gi|114327800|ref|YP_744957.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122327235|sp|Q0BT18|SYC_GRABC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114315974|gb|ABI62034.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 470

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 203/468 (43%), Positives = 264/468 (56%), Gaps = 36/468 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+       F+ IDP ++++YVCGPTVYD AHIGNAR M+VFDVL R+LR  Y    V
Sbjct: 22  LYNSATHGREPFRPIDPKHVKIYVCGPTVYDLAHIGNARSMVVFDVLARVLRRLYPR--V 79

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY RNITD+DDKI  RAR+   SI        IT++ T  F  D   L  L P  +PRAT
Sbjct: 80  TYARNITDVDDKINARARESGVSI------DEITARTTADFHADMASLGNLPPDIEPRAT 133

Query: 127 NHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
            HI +MI LI+ +I   HAYE + E    ++F  +S P+YGS S R  DE   G R+   
Sbjct: 134 AHIAEMILLIEKLIAQEHAYETHGEGEGHVLFSVASDPSYGSLSNRSPDELLAGARIDPA 193

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK+P DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DLIF
Sbjct: 194 PYKKDPGDFVLWKPSADDQPGWDSPWGRGRPGWHIECSAMSWRYLGEDFDIHGGGGDLIF 253

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS CA      A+ W+H+  L L+G KMSKS GN +T+ +LL          
Sbjct: 254 PHHENECAQSRCAFPGSHFAHYWMHSAMLLLDGEKMSKSLGNVLTVRDLLGQAD------ 307

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSAL 355
               IRL  L THYR  +DF  + L EA   L ++       P        ++  VL AL
Sbjct: 308 -GEAIRLLFLKTHYRGVLDFRYEALKEAGKELDRFYRALQAHPALPDLDETVENPVLEAL 366

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGI--EVCKEHLNKNIS-IAIEK 411
            +DLNT  A+  +H LA  +     L          ++G+     +    + I+   I +
Sbjct: 367 RDDLNTPQALSLMHGLAYAALGGDALAAAQLKEGGMLMGLFTREAEAWFQRGINPDEIAQ 426

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +RL   K + F+ AD IR +L   G +LED      G   T W++
Sbjct: 427 RIADRLQARKDRNFAEADRIRNELAEAGILLED------GPSGTTWRR 468


>gi|58582301|ref|YP_201317.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624181|ref|YP_451553.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|81311823|sp|Q5GZD9|SYC_XANOR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894962|sp|Q2P2E8|SYC_XANOM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58426895|gb|AAW75932.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368121|dbj|BAE69279.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 476

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 199/496 (40%), Positives = 272/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGI----- 346
             P   +R A+L  HYR+P+D++   + +A   L +   T           S G+     
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQATNTLDRLYGTLRDLAALEACGSSGVEVSKT 345

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEH----- 400
           I   V SAL +DLNT  A+  +  +A E+    ++L+     SA +  +   +       
Sbjct: 346 IPVEVESALQDDLNTPLALSVIASIASEARALRNELVHGGEPSARMSELHAVRAKLLGAG 405

Query: 401 -----------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             + +    I  LVQER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDADDDARITALVQERSAAKKAKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|21231689|ref|NP_637606.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768188|ref|YP_242950.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24418691|sp|Q8P8J0|SYC_XANCP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81305837|sp|Q4UVJ3|SYC_XANC8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21113388|gb|AAM41530.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573520|gb|AAY48930.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 457

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 194/477 (40%), Positives = 270/477 (56%), Gaps = 39/477 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I   HAY A   ++F  +S  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIASAHAYAAEGHVLFAVASFADYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAATHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGAVFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSA 354
             P   +R A+L  HYR+P+D++   + +A+  L +   T        +  +I   V +A
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLHDVAASAVIPAPVEAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS-------- 406
           L +DLNT  A+  + ++A E+ K +D        A +LG  +    L +  +        
Sbjct: 346 LDDDLNTPQALAEVARIAGEARKANDAADRARLKAELLGAGLALGLLQQEPAAWFSRGAD 405

Query: 407 ----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 I  LV ER    K K F+ AD IR+QL  +G +LED        +  RWK+
Sbjct: 406 AGDDARIAALVDERSAAKKAKDFARADAIRQQLADEGIVLEDTA------QGVRWKR 456


>gi|162147983|ref|YP_001602444.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786560|emb|CAP56142.1| putative cysteinyl-tRNA synthetase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 711

 Score =  353 bits (906), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 188/441 (42%), Positives = 257/441 (58%), Gaps = 21/441 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ ++++  RK   F  +DP N+R+Y CGPTVYD AHIGN R M+  D+L RLLR+ Y  
Sbjct: 7   QLTLHDSRSRKTVPFAPLDPGNVRVYYCGPTVYDLAHIGNLRAMVTADILVRLLRHLYPR 66

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI  RAR         + I  +T++  + F +D   +  L P  +P
Sbjct: 67  --VTYVRNITDVDDKINTRARAN------GETIDSLTARTIRDFHEDLDAVGILPPDIEP 118

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+HI +M+ LI  +I  GHAYEA   ++F  S  P YG+ S R  ++   G RV    
Sbjct: 119 RATHHIAEMLTLIGQLIDSGHAYEAQGHVLFAVSRFPAYGALSGRSPEDLLAGARVEVAP 178

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P  PGWESPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+FP
Sbjct: 179 YKRDPGDFVLWKPSAPDLPGWESPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLLFP 238

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS C     + AN W+HN  L + G KMSKS GNF+T+ + L          P
Sbjct: 239 HHENELAQSQCCFPHGRFANHWVHNAMLLVNGEKMSKSLGNFLTVRDALSVS-------P 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPA-VLSALYND 358
           A  +RL +L   YR  ++FT+  L +A+  L+++      T     +  PA VL+AL +D
Sbjct: 292 AEALRLLLLHAQYRSVLNFTLAGLEDAKQTLNRFYRAVGDTPPDGTVPVPAPVLAALCDD 351

Query: 359 LNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
           LNT  A+  +H LA R    + D      A+  +LG+    E         +     ERL
Sbjct: 352 LNTPRALAEMHALADRALAGDRDAALGLRAAGQLLGLLGQTEDAWFRAGTYVHPETIERL 411

Query: 418 ILLKMKKFSSADYIRKQLESK 438
           I+ +     S D+  ++  S+
Sbjct: 412 IVERQDARKSRDFCPRRRYSR 432


>gi|119386770|ref|YP_917825.1| cysteinyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|187629836|sp|A1B9D5|SYC_PARDP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119377365|gb|ABL72129.1| cysteinyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 462

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 197/452 (43%), Positives = 268/452 (59%), Gaps = 33/452 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R+   F+ IDP N+R+Y+CGPTVYD AH+GNARP++V DVL RLLR+  G 
Sbjct: 3   EIRLTNTRTRRKEVFRPIDPQNVRLYLCGPTVYDRAHLGNARPVVVIDVLVRLLRHLLGA 62

Query: 64  KCVTYVRNITDIDDKI----IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             VTYVRN TD+DDKI    + R     P   + + I   T +    +  D   L    P
Sbjct: 63  DHVTYVRNFTDVDDKINATALARKEAGTPGT-LEELIRERTHETIGWYHADMDALGAERP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            H+PRAT++I +MI +I+ +I  GHAY  +  ++F   S  +YG  S R +D+   G RV
Sbjct: 122 DHEPRATDYIGEMIAMIETLIAGGHAYARDGHVLFRVRSYADYGKLSGRSVDDMIAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG+ FDIH GG+D
Sbjct: 182 EVAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGESFDIHAGGID 241

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQSCCA      A +W+HN  L +EGRKMSKS GNF T+ +LL+      
Sbjct: 242 LQFPHHENEIAQSCCAHPHGDFARVWLHNEMLQVEGRKMSKSLGNFFTVRDLLD------ 295

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------VLS 353
           +  P  VIR  +L THYR+P+D+T ++  EAE +L +W         ++PA      V++
Sbjct: 296 QGIPGEVIRFVLLSTHYRKPMDWTAEKAREAEAVLRRWRGLVAG---VEPAPGPAPAVVA 352

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK------NISI 407
           AL +DLNT  AI ALH++A +        P   A A +LG+    E L        ++S 
Sbjct: 353 ALADDLNTAGAIAALHEMAGQGDG-----PGLLAGARMLGL--LTEDLGGWIAEGPDLSA 405

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             E++   R      K FS+ D ++++L   G
Sbjct: 406 LTERMAALRADAKASKDFSAVDALKQRLLDAG 437


>gi|329849853|ref|ZP_08264699.1| cysteinyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328841764|gb|EGF91334.1| cysteinyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 465

 Score =  353 bits (905), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 195/468 (41%), Positives = 262/468 (55%), Gaps = 44/468 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K++I++TL R   EFQ  +P  + +YVCGPTVY +AHIGNARP++VFDVL+RLLR  YGE
Sbjct: 2   KLQIHDTLRRDKVEFQPQNPQRVTLYVCGPTVYSYAHIGNARPVVVFDVLFRLLRTIYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITD+DDKI + A  +   I       +IT+     + +D   L  L PT +P
Sbjct: 62  DHVIYARNITDVDDKINKAAMDQGVEI------DVITNHFADIYNQDMATLGALRPTLEP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T+++  ++  I  I+ +GHAY     ++FD  S   YG+ SRR +D+   G RV    
Sbjct: 116 RVTHNMAAIVDQIAAIVANGHAYAEQGHVLFDVESFKTYGALSRRSVDDMIAGARVEVAP 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S   EP W+SPWG GRPGWHIECSAM    LG   DIHGGG DLIFP
Sbjct: 176 YKRNPQDFVLWKPSKTGEPVWDSPWGPGRPGWHIECSAMIEANLGLPIDIHGGGHDLIFP 235

Query: 244 HHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           HHENEIAQ  CA        + A+ W+HNGFL  +G KMSKS GN   +++L+       
Sbjct: 236 HHENEIAQGLCAQHAHGHDSEYAHYWMHNGFLTFDGDKMSKSLGNVKLVHDLI------- 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ-------RLTEAEILLSKWPQTSTSKGIIDPAVL 352
           +  P  VIR A+L  HYR P+D+T +       RL      L K+           PAVL
Sbjct: 289 KQVPGEVIRAALLSAHYRGPLDWTGELIAQTQSRLDGMYGTLRKFAAVPVRDEATPPAVL 348

Query: 353 SALYNDLNTVSAIQALHKLARE----------STKNHDLLPIFNASAHILGI------EV 396
            AL +DLNT  A   L  LA+                 LL    A+  +LG+        
Sbjct: 349 EALSDDLNTPRAFAELSALAKALETAADDAARIAAKSQLL----AAGKVLGLLQGDAEAW 404

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            K  +++++++ I+ L+ ER+     K +S AD IRK L+  G  + D
Sbjct: 405 FKAGVDEDLTVKIDALIAERIAARTAKNWSEADRIRKALDELGVEVMD 452


>gi|21243088|ref|NP_642670.1| cysteinyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24418693|sp|Q8PK23|SYC_XANAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21108603|gb|AAM37206.1| cysteinyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 476

 Score =  353 bits (905), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 199/496 (40%), Positives = 269/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSADLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA-- 350
             P   +R A+L  HYR+P+D++   + +A+  L +   T        + S   + P+  
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALQADSGNDVAPSRT 345

Query: 351 ----VLSALYNDLNTVSAIQALHKLARE--------------STKNHDLLPIFNASAHIL 392
               V SAL +DLNT  A+  +  +A E              ST+  DL  +        
Sbjct: 346 IPVEVESALEDDLNTPLALSVIASIASEARALRNELVHGGEPSTRMSDLHAVHAKLLGAG 405

Query: 393 GIEVCKEH---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                 +           +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDAGDDARITALVEERSTAKKAKDFARADAIRKQLAEEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DTP------QGVRWKR 475


>gi|67458460|ref|YP_246084.1| cysteinyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75537070|sp|Q4UND9|SYC_RICFE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|67003993|gb|AAY60919.1| Cysteinyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 459

 Score =  352 bits (904), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 203/477 (42%), Positives = 282/477 (59%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D + ++MYVCGPTVYD  HIGN+R ++V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQTKVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GE+ V YVRNITD+DDKII+RA  E  SI IN+    +T K TQ+F  +   L CL P+
Sbjct: 61  FGEQSVKYVRNITDVDDKIIDRA--ELLSITINE----LTDKVTQEFHTNMAYLGCLLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G R+ 
Sbjct: 115 IEPKATEHIDVMIEIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVRIE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KK+P DF+LWK + P E     ++SPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKHPQDFVLWKPAKPNESANMNFKSPWGFGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+  L++ K+ 
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPDSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRNLMD-KEI 293

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLS 353
            G      V+RL +L +HYR P+D+  + + +A+  L  W       +  K  +    + 
Sbjct: 294 SGE-----VVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHNFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  K  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEEKQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  + I +L+ +RL   K K +  AD IR QL  +  ILED   PD     T W+++
Sbjct: 408 VDELYINELLNKRLEAKKQKNWLLADQIRNQLLEEKIILED--KPDG---TTIWRKE 459


>gi|157825244|ref|YP_001492964.1| cysteinyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|187630857|sp|A8GM31|SYC_RICAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157799202|gb|ABV74456.1| cysteinyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 459

 Score =  352 bits (904), Expect = 6e-95,   Method: Compositional matrix adjust.
 Identities = 197/460 (42%), Positives = 274/460 (59%), Gaps = 28/460 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ +YNTL R    F   D +NI+MYVCGPTVYD  HIGN+R ++V+D+LYR++   
Sbjct: 1   MQIQLHLYNTLSRTKEVFNPQDQANIKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G + V YVRNITD+DDKII+RA  E   I IN+    +T K TQ+F  +   L C+ P 
Sbjct: 61  FGSRAVKYVRNITDVDDKIIDRA--ELLGITINE----LTDKVTQEFHTNMAYLGCMLPN 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY  +N + FD  S PNY   S R ++E   G R+ 
Sbjct: 115 IEPKATEHIDVMIEIIERLIAKDHAYITDNHVYFDVLSAPNYTELSNRNLEEMFEGVRIE 174

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +   K +P DF+LWK + P E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 KSKTKNHPQDFVLWKPAKPNESTNMNFESPWGFGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++ K  
Sbjct: 235 ADLVFPHHTNEIAQSRCAFPDSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD-KDI 293

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLS 353
            G      V+RL +L +HYR P+D+  + + +A+  L  W       +  K  +    + 
Sbjct: 294 SGE-----VVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHNFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-----ESTKNHDL-LPIFNASAHILGI--EVCKEHLNKNI 405
           +L +D+NT  A++ ++  A+     ++ K   L   +    A+ +G+  +   E  N  +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFIAKTEKERQLNASVIITCANFIGLMNQTPHEWFNSGV 408

Query: 406 -SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            S+ I +LV +RL   K K +  AD IR QL     ILED
Sbjct: 409 DSLYINELVNKRLEAKKQKNWLLADQIRNQLLEGKIILED 448


>gi|188576215|ref|YP_001913144.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520667|gb|ACD58612.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 474

 Score =  352 bits (903), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 198/493 (40%), Positives = 271/493 (54%), Gaps = 58/493 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  YG 
Sbjct: 2   SLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRRYG- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P  +P
Sbjct: 61  -ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPDIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV    
Sbjct: 114 EATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVDVAP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL FP
Sbjct: 174 YKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+          P
Sbjct: 234 HHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH-------P 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGI-----IDP 349
              +R A+L  HYR+P+D++   + +A   L +   T           S G+     I  
Sbjct: 287 PEALRYALLSAHYRQPLDWSDGLIEQATNTLDRLYGTLRDLAALEACGSSGVEVSKTIPV 346

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEH-------- 400
            V SAL +DLNT  A+  +  +A E+    ++L+     SA +  +   +          
Sbjct: 347 EVESALQDDLNTPLALSVIASIASEARALRNELVHGGEPSARMSELHAVRAKLLGAGLAL 406

Query: 401 --------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                          + +    I  LVQER    K K F+ AD IRKQL  +G +LED  
Sbjct: 407 GLLQQDPAAWFSRGTDADDDARITALVQERSAAKKAKDFARADAIRKQLADEGIVLEDTP 466

Query: 447 NPDNGQRMTRWKQ 459
                 +  RWK+
Sbjct: 467 ------QGVRWKR 473


>gi|94310045|ref|YP_583255.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353897|gb|ABF07986.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 472

 Score =  352 bits (902), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 200/476 (42%), Positives = 262/476 (55%), Gaps = 45/476 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +YN+L RK    +   P  + MYVCGPTVY+FAHIGNARP +VFDVL RLLR  
Sbjct: 1   MTSALSLYNSLTRKKEPLRTGQPGRVTMYVCGPTVYNFAHIGNARPAVVFDVLARLLREQ 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y E  V Y RN TD+DDKI   A  E   +PI      IT++    + +D   L  L P 
Sbjct: 61  YAE--VVYARNFTDVDDKINASAAAE--GVPIG----TITARYIDAYHEDMRALGVLIPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP +I LIQ +I +G+AY   + ++F   S P YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPAIIALIQRLIANGNAYVEQDHVLFHVPSFPAYGQLSGRRPEDMLAGVRVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW SPWGRGRPGWHIECSAM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTAEVPGWPSPWGRGRPGWHIECSAMIGQHLGSTIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  CA+  E     W+HN F+ ++G+KMSKS GN + + +LL        
Sbjct: 233 IFPHHENEIAQGTCANG-ELYCRTWVHNSFVTVDGQKMSKSLGNVLLLRDLLGQA----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQR-LTEAEILLSKWPQTSTSKGI-IDPA------VL 352
             P   IRLA+L  HYR P+D+  QR LT  + LL  +     ++ I I P       V+
Sbjct: 287 --PGEAIRLALLSAHYRHPLDWNAQRLLTARQTLLRFYRGLKMAEHIEISPGEEPDEEVI 344

Query: 353 SALYNDLNTVSAIQALHKLARESTK----------------NHDLLPIF-----NASAHI 391
           +AL NDLN   A+  LH L  E  K                +  LL +F     +A   +
Sbjct: 345 AALNNDLNIPGALARLHVLLAELEKAGADASRSVAKARMMASGRLLGLFQQDPNSALRGL 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            G  V         +  I+ LV ER    K + F+ AD +R++L + G ++ D  N
Sbjct: 405 AGAAVTHGIATTADAARIDHLVAEREQARKRRDFARADALREELGAAGVLVHDTPN 460


>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 467

 Score =  350 bits (899), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 192/489 (39%), Positives = 281/489 (57%), Gaps = 55/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ RK  EF  ++   ++MYVCGPTVY+F H+GNARP  VFD L R   Y   E 
Sbjct: 1   MKVYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII+R+ +E  S P       +  K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIIKRSHEEGIS-P-----EEVAEKYIKEYFIDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I ++I  IQ+++  G+AYE+N +++F T     YG  S + I+E ++G R+     
Sbjct: 113 VTDNIKEIISFIQDLVDKGYAYESNGDVLFRTREFKEYGKLSHQNIEELELGARIDVDDK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MSS YLG   DIH GG DL FPH
Sbjct: 173 KEDPLDFVLWKAKKDGEPGWKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQDLQFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     AN W+HNG++N++G KMSKS GNF T+ E+ E    G      
Sbjct: 233 HENEIAQSECRNG-HVFANYWMHNGYINVDGEKMSKSLGNFFTVREIAEKYDLG------ 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLT----EAEILLSKWPQTSTS---KGII 347
            ++R  +L THYR P++F+          ++RLT     AE ++SK   T  S    G++
Sbjct: 286 -LVRFFLLSTHYRNPVNFSDTILDQAKAGLERLTNARDNAEFMMSKLEDTKMSPEETGLV 344

Query: 348 DP------AVLSALYNDLNTVSAIQALHKLAR------ESTKNHDL----LPIFNASAHI 391
           D         + A+ +DLNT  AI A+ +LA+      + T + +     + +FN    +
Sbjct: 345 DELNSYKTKFIEAMDDDLNTSDAISAIFELAKFMNTNIKDTSSKEFIGLNIDLFNELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I       N +++  +E+++ +R    K K F+ AD IR++L   G ++ED +     
Sbjct: 405 LNIANKSVEENDDLARTVEEMIAKRAEAKKNKDFALADKIREELLEMGIVIEDTR----- 459

Query: 452 QRMTRWKQK 460
            +  +WK+K
Sbjct: 460 -QGVKWKRK 467


>gi|269958884|ref|YP_003328673.1| cysteinyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848715|gb|ACZ49359.1| cysteinyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 467

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 201/487 (41%), Positives = 280/487 (57%), Gaps = 53/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   D   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLRASKRVFSPRDGKRVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E  SI      + +T+  T+ F +D   L CL PT +P+
Sbjct: 60  -VVYVRNITDVDDKIINAANSEGKSI------AELTAHYTKLFHEDIKELNCLPPTFEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLFIIGKLIETGHAYVRGGTVYFSVESYEHYGALSGRKLCDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG+ FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWSSPWGVGRPGWHVECSAMSYRYLGESFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENE++QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL +   G 
Sbjct: 233 MFPHHENELSQSCCAFHGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLNSGVDG- 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGI----ID 348
                 V+R A L THYR+P+D+  + + +A+  L+K       +P    + G+    + 
Sbjct: 292 -----EVVRYAFLSTHYRKPLDWGDKLVLDAKEALNKIYRSCEGFPAKLLNTGLEYVDVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI-------- 394
             V+S+L +D+NT  AI ALH+L +E  K  D      L  + N SA ++G+        
Sbjct: 347 DGVMSSLQDDINTPGAIAALHELVKEINKASDSDEKLRLAKMLNKSAMLMGLFHNFPERK 406

Query: 395 -EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               +  +N++    IE+L+ +R+   K   F  AD IRK L S G  + D K+      
Sbjct: 407 FSSIQNLVNED---EIERLIAKRIEAKKCGDFKLADEIRKNLSSMGIGVSDGKDGS---- 459

Query: 454 MTRWKQK 460
            TRW +K
Sbjct: 460 -TRWHRK 465


>gi|330993327|ref|ZP_08317262.1| Cysteinyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759357|gb|EGG75866.1| Cysteinyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 459

 Score =  350 bits (897), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 195/471 (41%), Positives = 271/471 (57%), Gaps = 39/471 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ ++++  R    F  + P N+R+Y CGPTVYD AHIGN R M+  DVL RLLR+ Y  
Sbjct: 12  RLHLHDSRTRSTVPFVPLAPDNVRVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHLYPR 71

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITD+DDKI  RA          ++I+ +T++    F  D   ++ L P  +P
Sbjct: 72  --VTYVRNITDVDDKINARAHAN------GESIADLTARTIADFHADLAAVSILPPDVEP 123

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+HI +M  +I  +I  GHAYEA   ++F   + P+YG+ S R  D+   G RV    
Sbjct: 124 RATHHIGEMQDMIARLIESGHAYEAEGHVLFAVGTYPSYGALSGRTPDDLIAGARVEVAP 183

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+FP
Sbjct: 184 YKRDPGDFVLWKPSDDQTPGWDSPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLLFP 243

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS C       AN W+HN  L + G KMSKS GNF+T+ ++L       R  P
Sbjct: 244 HHENERAQSMCCHPHGHFANHWVHNAMLLVNGEKMSKSLGNFLTVRDVL-------RDTP 296

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLSA 354
           A  +RL +L   YR  ++FT + L EA  +L ++ +       +DP         +V+  
Sbjct: 297 AEALRLLLLRAQYRSVLNFTREGLDEARQMLDRFYRALEK---LDPDQPPVPAPDSVVQV 353

Query: 355 LYNDLNTVSAIQALHKLARES-TKNHDLLPIFNASAHILGI-----EVCKEHLNKNISIA 408
           L +DLNT  A+  +H LA  + T +        A+ +++G+     E       K     
Sbjct: 354 LCDDLNTPRALAEMHALADAALTGDRVAAAQLKAAGNLIGLLNDTPEAWFRGGAKVDPAH 413

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IE+L++ERL   K + F+ AD IR  L ++G +LED      G + T W+Q
Sbjct: 414 IERLIEERLAARKARDFARADEIRNTLAAQGIVLED------GPQGTTWRQ 458


>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|61216254|sp|Q747A2|SYC_GEOSL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 481

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 199/501 (39%), Positives = 276/501 (55%), Gaps = 67/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     +F  ++P  ++MYVCG TVYD  HIG+AR  +VFD++YR LR+   E 
Sbjct: 3   LRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +E   +P N    +I+ +   +F +D   L    PT+QP+
Sbjct: 62  -VTYVRNYTDVDDKIINRANKE--GVPFN----VISERFIAEFDRDMAALGLDLPTYQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +I+ ++  G AY A+ ++ F   +   Y   S+R ++E + G R+     
Sbjct: 115 ATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  WIHNGF+N+   KMSKS GNF TI E+LE       S+ A
Sbjct: 235 HENEIAQSEAANG-KPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLE-------SYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDPAVL- 352
            V+R  +L  HYR PIDF+ Q L EA   L +                T  G ID  +  
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGRIDEELAE 346

Query: 353 ----------SALYNDLNTVSA-------IQALHKLARESTKNHDLLP----IFNASAHI 391
                      A+ +D NT  A       ++A++++  E   +  +L       +    +
Sbjct: 347 KAAGLPTRFREAMDDDFNTAQALGYVFDLVRAVNRVLAEGEIDRAVLASAREAIDRVGAV 406

Query: 392 LGIEVCK-----EHLNKNISIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           LG+   +     E L    + A       IE+L++ER    K + F  AD IR  L ++G
Sbjct: 407 LGLFTSEPGAFVERLKSRKAAALPIEAAEIERLIEERNAARKARDFRRADEIRDTLAAQG 466

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
            +L D        + T WK K
Sbjct: 467 ILLLD------SAQGTTWKVK 481


>gi|315498776|ref|YP_004087580.1| cysteinyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315416788|gb|ADU13429.1| cysteinyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 463

 Score =  349 bits (896), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 199/481 (41%), Positives = 269/481 (55%), Gaps = 44/481 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++ +TL+R   +F   +P  + MYVCGPTVY++AHIGNARP++VFDVL+RLLRY YGE
Sbjct: 2   KLRLSDTLKRHKVDFVPKNPQRVTMYVCGPTVYNYAHIGNARPVVVFDVLFRLLRYIYGE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V Y RNITD+DDKI ++A  E   I       +ITSK    +  D   L  L PT QP
Sbjct: 62  EAVIYARNITDVDDKINQKAMAEGVDI------DVITSKFADIYNADMRALNALEPTIQP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T ++  ++  I  +I +GHAY A   ++FD  S   YG+ S R +D+   G RV    
Sbjct: 116 RVTQNMSAIVAQIAALIRNGHAYAAEGHVLFDVESYRAYGALSNRSLDDMIAGARVEVAP 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM    LG   DIHGGG DLIFP
Sbjct: 176 YKKNPQDFVLWKPSKPGEPKWPSPWGEGRPGWHIECSAMIEANLGLPIDIHGGGHDLIFP 235

Query: 244 HHENEIAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           HHENEIAQ  CA      + E  A  W+HNGFL ++  KMSKS GN + +++L+      
Sbjct: 236 HHENEIAQGVCAQHGHSHQEESYARYWMHNGFLTMDAEKMSKSLGNVLLVHDLI------ 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF-------TVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
            + +P  VIRLA+L  HYR P+D+       T +RL      L K       +  +  AV
Sbjct: 290 -KEFPGEVIRLALLSAHYRAPLDWNSDLLVQTRKRLDGLYEALRKAANVPVVETAVPEAV 348

Query: 352 LSALYNDLNT------VSAIQALHKLARESTKNHDLLPIFNASAHILGI------EVCKE 399
           + AL +DL+T      +SA+ +  + A +S K      +  A A ++GI         K 
Sbjct: 349 IDALCDDLSTPRVLAELSALASALEKASQSEKPLAKAQLLAAGA-LMGILQQEAESWFKG 407

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + ++S  +E L+  R      K ++ AD IR +L +    + D      G     WK 
Sbjct: 408 GADDDLSAKVETLLIARKTARAEKNWAEADRIRNELTALNVEVMD------GPEGATWKL 461

Query: 460 K 460
           K
Sbjct: 462 K 462


>gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 481

 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 199/501 (39%), Positives = 276/501 (55%), Gaps = 67/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     +F  ++P  ++MYVCG TVYD  HIG+AR  +VFD++YR LR+   E 
Sbjct: 3   LRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +E   +P N    +I+ +   +F +D   L    PT+QP+
Sbjct: 62  -VTYVRNYTDVDDKIINRANKE--GVPFN----VISERFIAEFDRDMAALGLDLPTYQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +I+ ++  G AY A+ ++ F   +   Y   S+R ++E + G R+     
Sbjct: 115 ATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  WIHNGF+N+   KMSKS GNF TI E+LE       S+ A
Sbjct: 235 HENEIAQSEAANG-KPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLE-------SYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDPAVL- 352
            V+R  +L  HYR PIDF+ Q L EA   L +                T  G ID  +  
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGRIDEELAE 346

Query: 353 ----------SALYNDLNTVSA-------IQALHKLARESTKNHDLLP----IFNASAHI 391
                      A+ +D NT  A       ++A++++  E   +  +L       +    +
Sbjct: 347 KAAGLPTRFREAMDDDFNTAQALGYVFDLVRAVNRVLAEGEIDRAVLASAREAIDRVGAV 406

Query: 392 LGIEVCK-----EHLNKNISIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           LG+   +     E L    + A       IE+L++ER    K + F  AD IR  L ++G
Sbjct: 407 LGLFTSEPGAFVERLKSRKAAALPIEAAEIERLIEERNAARKAQDFRRADEIRDTLAAQG 466

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
            +L D        + T WK K
Sbjct: 467 ILLLD------SAQGTTWKVK 481


>gi|257095793|ref|YP_003169434.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048317|gb|ACV37505.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 465

 Score =  349 bits (896), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 196/474 (41%), Positives = 272/474 (57%), Gaps = 39/474 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            I+++NTL R+   F   DP  + MYVCGPTVY++ HIGNARP++VFDVLYRLL  +Y +
Sbjct: 2   SIRLHNTLTRQKDVFMPADPQRVTMYVCGPTVYNYVHIGNARPVVVFDVLYRLLSRHYPQ 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITD+DDKI   A          + I I+  +    + +D T+L  L PT +P
Sbjct: 62  --VIYARNITDVDDKINAAAAAN------GEPIRILAERYATAYREDMTQLNALPPTIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT HIPQMI LI+ +I   HAY A   ++F   S+P+YG  S R+ D+   G RV    
Sbjct: 114 WATGHIPQMIALIERLIERSHAYVAEGHVLFHVPSLPDYGKLSGRQRDDMIAGARVEVAP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++PADF+LWK ST  +PGW SPWG GRPGWH+EC+AM   +LG   DIHGGG DLIFP
Sbjct: 174 YKRDPADFVLWKPSTAAQPGWHSPWGFGRPGWHMECTAMIHTHLGPSIDIHGGGQDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ   A+   +    W+HNG++ ++G KMSKS GNF T+ +LL+        +P
Sbjct: 234 HHENEIAQGEGANG-GQYCRYWLHNGYVTVDGEKMSKSLGNFRTVRDLLQY-------YP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSAL 355
             VIR A+L  HYR+P+DF++  L +A   L +   +       DP        AV +AL
Sbjct: 286 GEVIRYALLAGHYRKPLDFSLSALDQARAALDRLYGSLQPFAAPDPAPEGVRAEAVEAAL 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI---------EVCKEH 400
            +DLNT  A+  LH+ A    K  D      LL     +A +LG+         +  +  
Sbjct: 346 ADDLNTPLALGCLHEAATALRKCTDPAEQSRLLATLRDAADLLGLLQQNPATWRQQARAQ 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            N   +  IE+L+  R +    + F+ AD +R++L + G  +ED     +  R+
Sbjct: 406 DNCPATETIEQLIAARRVARARRDFARADELRQELLTLGIGIEDSATGTSWHRL 459


>gi|213019206|ref|ZP_03335013.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995315|gb|EEB55956.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 440

 Score =  348 bits (894), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 198/452 (43%), Positives = 266/452 (58%), Gaps = 38/452 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG+  VTYVRNITDIDDKII  A ++ 
Sbjct: 1   MYVCGPTVYDTAHIGNARSIVVYDVLFRLLKFCYGK--VTYVRNITDIDDKIINAANEK- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N  I  I+   T+ F +D   + C  PT++P+AT +I  +I LI++++  GHAYE
Sbjct: 58  -----NSNIESISKYYTKTFHEDMESINCAEPTYEPKATENIDNIIKLIESLLQAGHAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP----MEPG 203
           +N  + F   S P YG  S +KIDE   G+RV    +KK+P DF+LWK +      +   
Sbjct: 113 SNKHVYFSVESYPEYGVLSGKKIDELNYGSRVEVGENKKHPGDFVLWKPANETDYKLSSH 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL FPHHENEIAQS  A      A 
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAESTFAK 232

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGFL +   KMSKS  N + + +LL++   G       VIR A+L THYR+P+D+T
Sbjct: 233 YWVHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG------EVIRYALLKTHYRKPLDWT 286

Query: 324 VQRLTEAEILLSKWPQTSTSKGI------IDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              ++E++  L+K+ +   S  I      +    + AL NDLN   A+  LH++A E  K
Sbjct: 287 ENVISESQETLNKFYRLLRSTCIEESDTEVSKDFIEALKNDLNIPEAVAILHEMATEINK 346

Query: 378 NHD------LLPIFNASAHILGI--EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSA 428
             +      L   F  SA  +GI     +E     +S   IE+L+  R +  + K + +A
Sbjct: 347 TSNEYEKLKLTKKFVKSARFIGILESSYQEWFASGVSHQEIERLIDLRKVAKQNKDYDTA 406

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           D IR+QL+  G  +      DN    T W  K
Sbjct: 407 DKIREQLKQMGVTI-----SDNEDGTTTWYGK 433


>gi|325920178|ref|ZP_08182138.1| cysteinyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325549358|gb|EGD20252.1| cysteinyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 481

 Score =  348 bits (894), Expect = 8e-94,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 277/501 (55%), Gaps = 63/501 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DP++  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPTSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  +S  +YG  SRR  DE   G RV 
Sbjct: 113 IEPAATAHIPQIMAMIEQLIANGHAYAAEGHVLFAVASFEHYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGATIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAV 351
             P   +R A+L  HYR+P+D++   + +A+  L +           +T +  G   P  
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAAVETDSGVGPTQPTT 345

Query: 352 L-----SALYNDLNTVSAIQALHKLARESTKN-HDLLPIFN-----ASAHILGIEVCKEH 400
           +     SAL +DLNT  A+ AL KLA+E+++  HDL P        +  H+  +   K  
Sbjct: 346 IPDDVESALDDDLNTPLALAALAKLAKEASRALHDLAPAGGPDSERSGEHLAALRRAKSD 405

Query: 401 ----------------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                                  +      I  LV+ER    K K F+ AD IRKQL  +
Sbjct: 406 LLGAGLALGLLQQDPAAWFSRGTDAGDDARITTLVEERNAAKKAKDFARADAIRKQLADE 465

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G +LED        +  RWK+
Sbjct: 466 GIVLEDTP------QGVRWKR 480


>gi|325918144|ref|ZP_08180296.1| cysteinyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535619|gb|EGD07463.1| cysteinyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 476

 Score =  348 bits (893), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 200/504 (39%), Positives = 268/504 (53%), Gaps = 74/504 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS   +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSCPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITHRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  +S   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFAVASFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGWESPW RGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSTDDLPGWESPWSRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQTSTSKG 345
             P   +RLA++  HYR+P+D++   + +A+  L +                P  S S  
Sbjct: 288 --PPEALRLALVSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDVAALDAGDAPDGSASPA 345

Query: 346 IIDPA-VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL--- 401
           I  PA V +AL +DLNT  A+  +  +A E+        + N   H   I   +  L   
Sbjct: 346 I--PAEVEAALDDDLNTPQALSIIASIAAEARA------LRNQVTHGADISARRAELREI 397

Query: 402 --------------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                                     N      I  LV+ER    K K F+ AD IRKQL
Sbjct: 398 KTRLLGAGLALGLLQQDPAAWFARGTNAGDDARITALVEERSTAKKAKDFARADAIRKQL 457

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
             +G +LED        +  RWK+
Sbjct: 458 ADEGIVLEDTP------QGVRWKR 475


>gi|296114670|ref|ZP_06833322.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978766|gb|EFG85492.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 471

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 193/478 (40%), Positives = 274/478 (57%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL R    F   DP+ + MYVCGPTVY++AH+GNAR  +VFD+LYR+LR+ YG  
Sbjct: 14  LRLTNTLSRSKQIFVPRDPNRVTMYVCGPTVYNYAHLGNARSAVVFDLLYRILRHSYGR- 72

Query: 65  CVTYVRNITDIDDKI-IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V Y RN TD+DDKI  E  R   P       I  IT +    +  D   L  L P  +P
Sbjct: 73  -VLYARNFTDVDDKINAEAVRTGQP-------IGAITDRFISAYHADMAALGVLRPDFEP 124

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T H+  +I LI  ++  GHAY+A   ++F   S  +YG  S R  ++   G RV    
Sbjct: 125 RVTEHLSDIIALIDRLLEAGHAYQAAGHVLFHVPSFADYGRLSGRSREDVIAGARVEVAP 184

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF+LWK S+   PGWESPWGRGRPGWHIECSAM+ H LG   D+HGGG DLIFP
Sbjct: 185 FKRDPADFVLWKPSSDDAPGWESPWGRGRPGWHIECSAMTEHCLGLPIDLHGGGQDLIFP 244

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       + W+HNGF+ ++GRKMSKS GN +  ++LLE  +  G++  
Sbjct: 245 HHENEIAQSVSARDGAAYCDFWVHNGFVTVDGRKMSKSLGNVVLAHDLLE--RHDGQT-- 300

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKG------IIDPAVLS 353
              IRLA+L  HYR+P+D++ + LTE+   LS+  +    T++S        I+   V+ 
Sbjct: 301 ---IRLALLSAHYRQPLDWSDKLLTESGRALSRLKRLIADTASSDHDACAVPIVRNRVVQ 357

Query: 354 ALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASAHILGI------EVCKEHL 401
           AL +DLNT +A+ AL  +ARE        +   L      +  +LG+      +   +  
Sbjct: 358 ALADDLNTPAAMTALFSIARELRHADHVAERSRLRRELVEAVTLLGLKHDSPPDCLSQGT 417

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ++  + A+ ++V +R +  + K +  AD +R  L  KG +L+D          TRW++
Sbjct: 418 DETSNAALAEMVAQRDVARRRKDYQEADILRDALLLKGVVLDDT------HEGTRWRR 469


>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 479

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 201/497 (40%), Positives = 265/497 (53%), Gaps = 65/497 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN L  K   F  ++P  + MYVCGPTVY   HIG+AR ++VFDV+ R LR      
Sbjct: 3   LSIYNVLTGKKELFVPVNPGKVGMYVCGPTVYGPCHIGHARSVVVFDVIARYLRV--AGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +E  +         I  K   +F +D   L     T +P+
Sbjct: 61  DVTYVRNFTDVDDKIIHRAAEEGKTS------EQIAEKYIAEFYRDMDALFVQRATVEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  ++ +IQ ++  G AYEA  ++ F   + P YG  S RK+D+ + G R+     
Sbjct: 115 ATEHIDDILAVIQILVNKGVAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARIEVDKR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK   P EP WESPWGRGRPGWHIEC+AMSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KRNPFDFVLWKAEKPGEPSWESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   E  A  W+HNGF+ +   KMSKS  NF  INE+LE       ++  
Sbjct: 235 HENEIAQSEAAFGRE-FARFWVHNGFVQINQEKMSKSLNNFKMINEILE-------AYHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQTSTSKGI 346
             +RL +L +HYR PIDF+   + EA   L K                   P +    G 
Sbjct: 287 ETVRLFLLSSHYRSPIDFSDTSMAEAGAGLDKLYTALGRVEALTPSGEKPSPASDGDAGE 346

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARE----------------------STKNHDLLPI 384
              +   A+ +D NT  A+ AL + AR                         K+ D+L +
Sbjct: 347 YWNSFCQAMDDDFNTARAVAALFETARHINRLLDQAGDLLTADVSAHYDVMRKSGDVLGL 406

Query: 385 FNASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           FN  A +   E  K+   K  ++    I+++V +R+   K K F+ AD +RKQL     +
Sbjct: 407 FNTPAQVY-FEGRKQAAAKKDAVDPAEIDRMVAQRVAARKAKDFAKADQLRKQLTDLNVV 465

Query: 442 LEDYKNPDNGQRMTRWK 458
           LED  +PD     T WK
Sbjct: 466 LED--SPDG---TTTWK 477


>gi|88606973|ref|YP_505147.1| cysteinyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|109894881|sp|Q2GKF4|SYC_ANAPZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88598036|gb|ABD43506.1| cysteinyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 462

 Score =  348 bits (892), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 203/480 (42%), Positives = 272/480 (56%), Gaps = 44/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T       F  ID + +++Y CGPTVYD AHIGNAR  +V+DVL+RLLR  Y E 
Sbjct: 1   MKLYDTFSAAKRVFDPIDSACVKIYACGPTVYDLAHIGNARSAVVYDVLFRLLRELYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A +   +I         T +  + F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINAAAETGQNI------GDFTERYIRYFHEDMDALNCLSPTVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+ LI  ++  GHAY     + F  SS  +YG  S RKIDE   G RV     
Sbjct: 113 ATAEIDTMLQLISRLVESGHAYVKGGSVYFSISSHRHYGRLSGRKIDEMISGNRVSIDAE 172

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T  +      WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATEQDIKLGAAWESPWGGGRPGWHIECSAMSYRYLGESFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENE+AQ+ CA    + A  W+HNGFL +  G KMSKS GN IT+  L  +   G 
Sbjct: 233 MFPHHENELAQNMCAFSGSEYARYWVHNGFLTVNAGEKMSKSLGNVITVRGLRNSGIEG- 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGI--------ID 348
                 VIR   L THYR+P+D+  + + +A+  LSK  ++    TS+ +        + 
Sbjct: 292 -----AVIRYVFLCTHYRKPLDWNEKAIFDAQSALSKMRRSCEEFTSEELNSDIEAVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE--VCKEH 400
             +L AL +D+NT  AI ALH L  E  K  D      L  + N SA ++GI      + 
Sbjct: 347 NMLLEALKDDMNTPMAIAALHALVGEINKTTDFKERLKLARVLNRSAKLMGITDGFAGKS 406

Query: 401 LNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + + +  I++L++ R        +S AD IR QL S G +++D K+      +TRW +
Sbjct: 407 AEEAVDVDKIQELLERRREARNGGNYSLADEIRDQLHSMGIVIKDDKDG-----VTRWSR 461


>gi|34580931|ref|ZP_00142411.1| cysteinyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262316|gb|EAA25820.1| cysteinyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 459

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 198/461 (42%), Positives = 274/461 (59%), Gaps = 30/461 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L+  K+ 
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLM-NKQI 293

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLS 353
            G      V+RL +L +HYR P+D+  + + +A+  L  W +     +  K  +    + 
Sbjct: 294 QGE-----VVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNAS-----AHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+   S+K  +   + NAS     A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFSSKTEEERQL-NASAIITCANFIGLMNKTPHEWFNSG 407

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +  + + +LV +RL   K K +  AD IR QL  +  ILED
Sbjct: 408 VDELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILED 448


>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|109894889|sp|Q3A9P1|SYC_CARHZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 465

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 199/486 (40%), Positives = 268/486 (55%), Gaps = 53/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +   EF   +P  + MYVCGPT Y++ HIGNARP++ FD + R   Y   E 
Sbjct: 1   MKIYNTLTKTKEEFIPREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFEYKGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII RA +E  S PI      +  K   ++ KD  RL     T  P+
Sbjct: 60  -VIYVQNFTDIDDKIINRALEEGIS-PIE-----LGQKYIIEYFKDADRLGVKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I +++ +I  G+AYE    + F   S  +YG  S R ++E K G RV     
Sbjct: 113 VTEHIPEIIEMVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARVEVDEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 173 KKNPLDFALWKKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS  A   +  A  W+HNGF+ +   KMSKS GNF  + E+LE  KF GR    
Sbjct: 233 HENEVAQS-EAFTGKPFARYWMHNGFITVNQEKMSKSLGNFFLVREILE--KFPGR---- 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------- 350
            V+R  +L THYR P+DF  ++L EA+  L +      +   ++P               
Sbjct: 286 -VVRFFLLSTHYRSPLDFDDKKLNEAKAALERVDNFVQNLKEVNPLPGEARIEIQEKITN 344

Query: 351 ----VLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNASAHILGIE 395
                  A+ +D NT  A+ +L +L R            +          N    + GIE
Sbjct: 345 FLRDFNEAMEDDFNTAQAMASLFELVRFGNTQIASGNLTAGDKKLFEEALNVYTQVFGIE 404

Query: 396 --VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             V ++   ++I+  +E L++ R  L K KK+  AD+IR +L+ +G ILED        +
Sbjct: 405 FGVLEKIAGEDITPFVELLIEVRARLKKEKKYDLADFIRDELKKQGIILED------TPK 458

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 459 GVRWKR 464


>gi|229586323|ref|YP_002844824.1| cysteinyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511841|sp|C3PMC1|SYC_RICAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|228021373|gb|ACP53081.1| Cysteinyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 459

 Score =  347 bits (891), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 198/477 (41%), Positives = 278/477 (58%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++ +  
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMDKQIQ 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLS 353
           G       V+RL +L +HYR P+D+  + + +A+  L+ W +     +  K  +    + 
Sbjct: 295 G------EVVRLFLLSSHYRRPLDYNDKAIEDAKKTLNYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPNEWFNSG 407

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  + + +LV +RL   K K +  AD IR QL  +  ILED   PD     T W+++
Sbjct: 408 VDELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILED--RPDG---TTIWRKE 459


>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 459

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 202/478 (42%), Positives = 278/478 (58%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT++R+   F  I P +I MYVCG TVYD+ H+G+AR MIVFDV+YR L +   + 
Sbjct: 3   LMLYNTIKREKEAFVPIRPGHIGMYVCGVTVYDYCHVGHARVMIVFDVIYRWLMHSGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TD+DDKII+RA +         AI  +T++    F  D   L CL PTH+PR
Sbjct: 62  -VDYVRNFTDVDDKIIKRAAER------GIAIDALTNEMIDAFHADADALGCLRPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  MI +IQ ++    AY   + ++++      +YG  S +KIDE + G+RV    
Sbjct: 115 ATAHMDAMISMIQALMEKDMAYVSESGDVLYAVRGFSDYGQLSGKKIDELESGSRVDVDQ 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP W SPWG+GRPGWHIECSAMS  +LG  FDIHGGG+DL FP
Sbjct: 175 SKRDPLDFVLWKMAKADEPAWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLKFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A+     A  W+HNGF+N+   KMSKS GNF TI E+ E      R  P
Sbjct: 235 HHENEIAQARAANG-GGFARYWLHNGFVNINAEKMSKSLGNFFTIREVTE------RYHP 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL------SKWPQTSTSKGIIDPAVL----- 352
             V+R+ ML THYR P+DF+   L  A+  L      +K  Q S   G    A+L     
Sbjct: 288 -EVLRMFMLGTHYRSPLDFSDAALDVAKSGLDRLYKTAKRCQESGVTGAGGQALLPHHFT 346

Query: 353 SALYNDLNTVSAI-------QALHKLARESTKNHDLLPIFNASAHILGI---EVCKEHLN 402
           +A+ +D NT  A+       +AL+K   E+     L   F A + +LGI   +      +
Sbjct: 347 TAMDDDFNTPEALAVLFDTSRALNKGLNEAQDVTALAGQFTAMSALLGIVQQDTAIWFQS 406

Query: 403 KNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            ++ + AIE L++ERL   K + F+ AD IR +L ++G +LED  +       T WK+
Sbjct: 407 GDVDAAAIEALIEERLQARKNRDFARADAIRNELSAQGIVLEDSASG------TTWKK 458


>gi|238650546|ref|YP_002916398.1| cysteinyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511842|sp|C4K199|SYC_RICPU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|238624644|gb|ACR47350.1| cysteinyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 459

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 199/477 (41%), Positives = 276/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++ +  
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMDKQIQ 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLS 353
           G       V+RL +L +HYR P+D+  + + +A+  L  W       +  K  +    + 
Sbjct: 295 G------EVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  + I +LV +RL   K K +  AD IR QL  +  ILED   PD     T W+++
Sbjct: 408 VDELYINELVNKRLEAKKQKNWLLADQIRNQLLEEKIILED--QPDG---TTIWRKE 459


>gi|225629958|ref|YP_002726749.1| Cysteinyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254781700|sp|C0R5B6|SYC_WOLWR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225591939|gb|ACN94958.1| Cysteinyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 457

 Score =  347 bits (890), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 199/475 (41%), Positives = 279/475 (58%), Gaps = 41/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFIPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  IT+   + F  D   + C  PT++P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKKPTYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  W+HNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAV 351
                VIR A+L THYR+P+D+T   +++A+  L+K+ + S          S   I    
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDF 347

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEHLNK 403
           + AL NDLN   A+  LH++A +  K  +      L   F  SA  +G+     +E    
Sbjct: 348 IDALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTA 407

Query: 404 NIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +S   IE+L+  R    + K +++AD IR QL+  G  +      DN    T W
Sbjct: 408 GVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLKQIGVTI-----SDNEDGTTTW 457


>gi|58699028|ref|ZP_00373873.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534456|gb|EAL58610.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 468

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 199/475 (41%), Positives = 279/475 (58%), Gaps = 41/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 13  VRLYNTLTKKKELFIPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 71

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  IT+   + F  D   + C  PT++P+
Sbjct: 72  -VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKKPTYEPK 124

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 125 ATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 184

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 185 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 244

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  W+HNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 245 QFPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 302

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAV 351
                VIR A+L THYR+P+D+T   +++A+  L+K+ + S          S   I    
Sbjct: 303 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDF 358

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEHLNK 403
           + AL NDLN   A+  LH++A +  K  +      L   F  SA  +G+     +E    
Sbjct: 359 IDALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTA 418

Query: 404 NIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +S   IE+L+  R    + K +++AD IR QL+  G  +      DN    T W
Sbjct: 419 GVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLKQIGVTI-----SDNEDGTTTW 468


>gi|15892034|ref|NP_359748.1| cysteinyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|21264013|sp|Q92JF6|SYC_RICCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15619152|gb|AAL02649.1| cysteinyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 459

 Score =  347 bits (889), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 198/477 (41%), Positives = 277/477 (58%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++ +  
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMDKQIQ 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLS 353
           G       V+RL +L +HYR P+D+  + + +A+  L  W +     +  K  +    + 
Sbjct: 295 G------EVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  + + +LV +RL   K K +  AD IR QL  +  ILED   PD     T W+++
Sbjct: 408 VDELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILED--RPDG---TTIWRKE 459


>gi|157827987|ref|YP_001494229.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932680|ref|YP_001649469.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|187631627|sp|B0BW37|SYC_RICRO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631628|sp|A8GQP6|SYC_RICRS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157800468|gb|ABV75721.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907767|gb|ABY72063.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 459

 Score =  346 bits (888), Expect = 4e-93,   Method: Compositional matrix adjust.
 Identities = 199/477 (41%), Positives = 275/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ + ++YNTL R    F   D  N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFRLYNTLSRTKEVFNPQDQDNVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++ +  
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMDKQIQ 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLS 353
           G       V+RL +L +HYR P+D+  + + +A+  L  W       +  K  +    + 
Sbjct: 295 G------EVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIEVCKEH--LNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+     H   N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKSPHEWFNSG 407

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  + I +LV +RL   K K +  AD IR QL  +  ILED   PD     T W+++
Sbjct: 408 VDELYINELVNKRLEAKKHKNWLLADQIRNQLLEEKIILED--QPDG---TTIWRKE 459


>gi|83859158|ref|ZP_00952679.1| cysteinyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852605|gb|EAP90458.1| cysteinyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 462

 Score =  346 bits (887), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 192/480 (40%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  RK  +F  ID   + MYVCGPTVY  AHIGN RP + FDVL+RLLR+ YG +
Sbjct: 4   LTLYDTAARKKRDFVPIDADRVTMYVCGPTVYSEAHIGNFRPPVAFDVLFRLLRHIYGSE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKI + A      I      S+IT K    + +D+  L    PT +P 
Sbjct: 64  HVVYARNITDVDDKINKAAADAGVDI------SVITDKYAAIYREDSAALNITPPTLEPA 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+PQMI +I+ +I  G AY A   ++F   S   YG  S R +D+   G RV    +
Sbjct: 118 ATAHMPQMIAMIEKLIADGFAYAAEGHVLFSVGSYDKYGKLSGRSLDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+PADF+LWK S P EP WE+P+G GRPGWH+ECSAM    LG+  DIH GG DL+FPH
Sbjct: 178 KKDPADFVLWKPSKPGEPVWEAPFGDGRPGWHLECSAMIEATLGETIDIHAGGGDLVFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA      AN W+HNGFL++   KMSKS GN I  N+LL+    G      
Sbjct: 238 HENEVAQSVCAHAGAPLANYWLHNGFLSMASEKMSKSLGNVIKPNDLLQNGVKG------ 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPAVLSALYN 357
            VIR A++  HYR P+D+  + L   +        +L +    + +      AV+ AL +
Sbjct: 292 EVIRYALMTGHYRAPLDWNAKLLENTQRSMDRLYGVLRRLKGVNAADVAAPEAVMDALLD 351

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-----------------LGIEVCKEH 400
           DLNT  A+ AL ++A  + K         A   +                  G++   E 
Sbjct: 352 DLNTPKALAALFEIAGRANKADSEDAQARAKGELLAAGRLLGLFDQDPDAWFGLDTVDEA 411

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           L       I++L+ ERL   + K F  AD IR+ L +K   +      D+G     W+ K
Sbjct: 412 LRAE----IDQLLAERLAARQAKDFEKADAIREILNAKNVQV------DDGPEGATWRLK 461


>gi|157803268|ref|YP_001491817.1| cysteinyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|187630858|sp|A8EXE9|SYC_RICCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157784531|gb|ABV73032.1| cysteinyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 459

 Score =  346 bits (887), Expect = 6e-93,   Method: Compositional matrix adjust.
 Identities = 197/461 (42%), Positives = 273/461 (59%), Gaps = 29/461 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F+  D +N++MYVCGPTVYD  HIGN+R   V+D+LYR+L   
Sbjct: 1   MQIQFHLYNTLTRTKELFRPQDQANVKMYVCGPTVYDNPHIGNSRSAAVYDLLYRILIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G   V Y+RNITD+DDKII+RA        +   I+ +T K TQ+F  +   L C  P+
Sbjct: 61  FGSTAVKYIRNITDVDDKIIDRAEL------LGSTINELTDKVTQEFHINMEYLGCKLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+  + F+  S PNY   S R ++E   G RV 
Sbjct: 115 IEPKATEHIDIMIEIIERLIAKKHAYIADKHVYFNVLSAPNYTELSNRNLEEMFEGVRVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KK+P DF+LWK + P E     ++SPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKHPQDFVLWKPAKPNESANMNFDSPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+H+GFL + G KMSKS GNFIT+ +L++ K+ 
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHHGFLTVNGEKMSKSLGNFITVRDLMD-KEI 293

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVL 352
            G      VIRL +L +HYR P+D+  + + +A+  L  W +   +       II    +
Sbjct: 294 SGE-----VIRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIVNINLQKIDIIPNDFM 348

Query: 353 SALYNDLNTVSAIQALHKLARES-TKNHDLLPIFNAS-----AHILGI--EVCKEHLNKN 404
            +L +D+NT  A++ ++  AR   T   +    FNAS     A+ +G+  +   E  N  
Sbjct: 349 QSLLDDMNTPLAVKIINDYARGVFTSTTEEEKKFNASNLITCANFIGLMNKTPHEWFNSG 408

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ++ + I +LV +RL   K K +  AD IR QL  +  +LED
Sbjct: 409 VNELYINELVNKRLEAKKQKNWLLADQIRNQLLEQQIVLED 449


>gi|68171834|ref|ZP_00545169.1| Cysteinyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67998744|gb|EAM85461.1| Cysteinyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 459

 Score =  345 bits (885), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 201/480 (41%), Positives = 274/480 (57%), Gaps = 49/480 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL      F      N+R+YVCGPTVYDFAHIGNAR ++++DVL+RLL+  Y +  V
Sbjct: 3   IYNTLTGIKEPFVPFSIDNVRVYVCGPTVYDFAHIGNARSVVIYDVLFRLLKLLYPK--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII  A+  + SI    AI I      + F +D   L CL PT++PRAT
Sbjct: 61  TYVRNITDIDDKIINVAQNTNQSIYDVTAIYI------KAFHEDMKMLNCLEPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           ++I  +I LIQ ++  GHAY  N  + F+  S  +YG  S R I +   G+R+  +  KK
Sbjct: 115 DNIDVIISLIQKLVDSGHAYVYNGSVFFNIESYSSYGQLSGRNISQLIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS  YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEIDNQLMSCWSSPWGLGRPGWHIECSAMSYRYLKENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA    + A  W+HNGFL +   KMSKS GN +T+ +LL +   G    
Sbjct: 235 PHHENEIAQSCCAFPDSRYAKYWVHNGFLTVNDEKMSKSLGNVLTVRQLLNSGITG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
              +IR  +L THYR+P+D+  Q +  A+  L++     +S  +         +   V+ 
Sbjct: 291 --ELIRYVLLSTHYRKPLDWNSQMVASAQESLNRMYTALSSTNVDLSLDDSVELSSHVID 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFN------ASAHILGIEVCKEH------- 400
            L +D+NT  AI  LH++  E  K  D++   +       +A+ LGI    +H       
Sbjct: 349 CLKDDINTPKAISMLHEMVTEINKTADMIEKISLTKTLIKTANFLGI---LQHSWQDWFK 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ N +  I +L+ ER        F  AD IR+ L ++G +L      DN    T W +K
Sbjct: 406 IDDN-NQEISQLIDERKKARANNDFKRADDIRQLLLNRGIVLS-----DNKDGTTHWYKK 459


>gi|78221284|ref|YP_383031.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|109894903|sp|Q39ZL8|SYC_GEOMG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 485

 Score =  345 bits (885), Expect = 9e-93,   Method: Compositional matrix adjust.
 Identities = 208/505 (41%), Positives = 269/505 (53%), Gaps = 71/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     EF  + P  + MYVCG TVYD  HIG+AR  +VFD++YR LR+     
Sbjct: 3   LRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRH--AGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA QE   +P N     I+ +   +F +D   L    PTHQP+
Sbjct: 61  DVTYVRNYTDVDDKIINRANQE--GVPYN----AISERFIAEFDRDMAALGLDLPTHQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +I  +I  G AY A+ ++ F       Y   S+R +DE + G R+     
Sbjct: 115 ATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP WESPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A+ WIHNGF+N+   KMSKS GNF TI E+LE        + A
Sbjct: 235 HENEIAQSEAANG-KPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLE-------KYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKGII 347
            V+R  +L  HYR PIDF+ Q L EAE  L +   T                  T + + 
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLREAEAGLERIYGTLAGIDENLTKGAEGTAEETDRELA 346

Query: 348 DPAVL------SALYNDLNTVSAIQALHKLARESTK----------NHDLLP----IFNA 387
           + AV        A+ +D NT  A+  +  L R + +          N  LL         
Sbjct: 347 EKAVTFPERFREAMDDDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRALLAEARDRIRK 406

Query: 388 SAHILGI---------EVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQL 435
              +LGI         E  K      + I    IE+L+ ER+     + F  AD IR  L
Sbjct: 407 VGAVLGIFTSEPRAFAERLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRDSL 466

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
            +KG +L D  +P      T WK K
Sbjct: 467 AAKGIMLLD--SPQG----TTWKVK 485


>gi|88658290|ref|YP_507566.1| cysteinyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|109894900|sp|Q2GG67|SYC_EHRCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88599747|gb|ABD45216.1| cysteinyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 459

 Score =  345 bits (884), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 201/480 (41%), Positives = 274/480 (57%), Gaps = 49/480 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL      F      N+R+YVCGPTVYDFAHIGNAR ++++DVL+RLL+  Y +  V
Sbjct: 3   IYNTLTGIKEPFVPFSIDNVRVYVCGPTVYDFAHIGNARSVVIYDVLFRLLKLLYPK--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII  A+  + SI    AI I      + F +D   L CL PT++PRAT
Sbjct: 61  TYVRNITDIDDKIINVAQNTNQSIYDVTAIYI------KAFHEDMRMLNCLEPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           ++I  +I LIQ ++  GHAY  N  + F+  S  +YG  S R I +   G+R+  +  KK
Sbjct: 115 DNIDVIISLIQKLVDSGHAYVYNGSVFFNIESYSSYGQLSGRNISQLIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS  YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEIDNQLMSCWSSPWGLGRPGWHIECSAMSYRYLKENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA    + A  W+HNGFL +   KMSKS GN +T+ +LL +   G    
Sbjct: 235 PHHENEIAQSCCAFPDSRYAKYWVHNGFLTVNDEKMSKSLGNVLTVRQLLNSGITG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
              +IR  +L THYR+P+D+  Q +  A+  L++     +S  +         +   V+ 
Sbjct: 291 --ELIRYVLLSTHYRKPLDWNSQMVASAQESLNRMYTALSSTNVDLSLDDSVELSSHVID 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFN------ASAHILGIEVCKEH------- 400
            L +D+NT  AI  LH++  E  K  D++   +       +A+ LGI    +H       
Sbjct: 349 CLKDDINTPKAISMLHEMVTEINKTADMIEKISLTKTLIKTANFLGI---LQHSWQDWFK 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ N +  I +L+ ER        F  AD IR+ L ++G +L      DN    T W +K
Sbjct: 406 IDDN-NQEISQLIDERKKARANNDFKRADDIRQLLLNRGIVLS-----DNKDGTTHWYKK 459


>gi|157964147|ref|YP_001498971.1| cysteinyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|187630859|sp|A8F0I8|SYC_RICM5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157843923|gb|ABV84424.1| Cysteinyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 459

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 198/477 (41%), Positives = 276/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVYD  HIGN R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYDNPHIGNGRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNIT++DDKII+RA  E   + I++    +T K T++F K+   L C+ P+
Sbjct: 61  FGEKTVKYVRNITNVDDKIIDRA--ELLGVTIDE----LTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT H   MI +I+ +I   HAY  +N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHTDVMIAIIERLIAKEHAYVVDNHVYFDVLSAPNYTELSNRSLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFITI +L++ +  
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITIRDLMDKQIQ 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLS 353
           G       V+RL +L +HYR P+D+  + + +A+  L  W       +  K  +    + 
Sbjct: 295 G------EVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 IS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  + I + V +RL   K K +  AD IR QL  +  ILED   PD     T W+++
Sbjct: 408 VDELYINEFVNKRLEAKKQKNWLLADQIRNQLLEEKIILED--QPDG---TTIWRKE 459


>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 463

 Score =  344 bits (883), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 206/489 (42%), Positives = 267/489 (54%), Gaps = 61/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL R+  EF  I+   + +YVCGPTVYD+ HIGNARPMIVFD L R L Y   + 
Sbjct: 1   MKILNTLTRRKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E       DA S+I+ +   +  KD   L     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANEEGV-----DA-SVISERYIAEVKKDMAALNVREATTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  IP MI +++ +I  G+AYE N  + F T    +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIPDMIEMVKTLIEKGYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W SPWG GRPGWH+ECS MS  Y+G V DIH GG DL+
Sbjct: 173 VDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFL +   KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGTE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAE--------ILLSKWPQTSTSKGIIDPAVL- 352
           +P  VIR  ML  HYR P++F+   L EA           + +    S ++G +D AV  
Sbjct: 285 YPLQVIRFFMLSAHYRSPLNFSAD-LVEASKNGLERILTAVDRLKSISGTEGEVDKAVAD 343

Query: 353 ----------SALYNDLNTVSAIQALHKLAR--------ESTKN--HDLLPIFNASAHIL 392
                     +A+ +DLNT  AI  + +L +        ESTK     +L        IL
Sbjct: 344 EMDAFVKKYEAAMDDDLNTADAISVIFELVKYANVNVTEESTKATVELVLNTVTKLCDIL 403

Query: 393 GI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           GI  E  KE L+ +    IE L++ER    K K F+ AD IR QL   G ILED +    
Sbjct: 404 GIITEKKKEILDSD----IEALIEERQAARKAKNFARADEIRDQLSDMGIILEDTREG-- 457

Query: 451 GQRMTRWKQ 459
                +WK+
Sbjct: 458 ----VKWKR 462


>gi|317497616|ref|ZP_07955934.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895175|gb|EFV17339.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 467

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 197/475 (41%), Positives = 260/475 (54%), Gaps = 53/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  + P  + MYVCGPTVY++ HIGNARPMI+FD + R   Y   E 
Sbjct: 1   MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  +       + I  +  ++  +D   L     THQPR
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVTA------TEIAERYIKECKQDMEALNIKPATHQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  GHAYE +  + F T S  +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  KK+P DF+LWK     E  W+SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKKDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  EK AN W+HNGFLN+  +KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEACNG-EKFANYWMHNGFLNINNKKMSKSAGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL--------------SKWPQTSTSK--- 344
           +P  VIR  ML  HYR P++F+   +  A+  L              +K    S SK   
Sbjct: 285 YPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCREMAAKEETGSLSKEET 344

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASA 389
                  ++      A+ +D NT  A+ A+ ++ RES              +L +     
Sbjct: 345 EHFANIEVLVKKFEDAMEDDFNTADAVSAIFEIVRESNSTVKDFSADYAKKILKVLEDLC 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGIE  KE    +  I   KL++ER    K K F+ AD IR QL  +G +L+D
Sbjct: 405 SVLGIETTKEEEILDEEIE--KLIEERQAARKNKDFARADEIRDQLLEQGIVLKD 457


>gi|188991323|ref|YP_001903333.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733083|emb|CAP51281.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 479

 Score =  344 bits (883), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 195/498 (39%), Positives = 264/498 (53%), Gaps = 61/498 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ--GVPI----STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I   HAY A   ++F  +S  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIASEHAYAAEGHVLFAVASFADYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRNPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGAVFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-------VQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             P   +RLA+L  HYR+P+D++         RL     LL++       +  I   +  
Sbjct: 288 --PPEALRLALLSAHYRQPLDWSDGLIETETNRLDGLYKLLNRLKAFDEVQASIPDEIED 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKN-HDLLPIFNASAHILG-IEVCKE------------ 399
           AL  DLNT  A++ L K A  + +   +  P     +   G I+  K+            
Sbjct: 346 ALNEDLNTPLALRVLAKFADRARRALKEFAPPGGPDSEQTGSIDAVKKAKAELLGAGLAL 405

Query: 400 -------------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                                +      I  LV ER    K K F+ AD IR+QL  +G 
Sbjct: 406 GLLQQDPAAWLSRGNKAGTSTDAGDDARIAALVDERSAAKKAKDFARADAIRQQLADEGI 465

Query: 441 ILEDYKNPDNGQRMTRWK 458
           +LED        +  RWK
Sbjct: 466 VLEDTA------QGVRWK 477


>gi|154253106|ref|YP_001413930.1| cysteinyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|187629837|sp|A7HWJ0|SYC_PARL1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154157056|gb|ABS64273.1| cysteinyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 468

 Score =  343 bits (881), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 198/480 (41%), Positives = 270/480 (56%), Gaps = 44/480 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K K+ +YNTL R+   F+  +P  + MYVCGPTVY+ +HIGNARP +VFDVL RLLR  Y
Sbjct: 7   KLKLSLYNTLTRQKEIFEPAEPDRVTMYVCGPTVYNRSHIGNARPAVVFDVLARLLRRLY 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V Y RNITDI+DKII  A++    I      S+IT K  + + +D   L  LAP  
Sbjct: 67  RH--VVYARNITDIEDKIIAAAKEAGVDI------SVITEKYARIYREDMGALGVLAPDI 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +P+AT  I +MI +++ +I  G+AY A   ++F+  S   YG  S R  D+   G RV  
Sbjct: 119 EPKATESIAEMISMMERLIASGNAYAAEGHVLFNVPSFAEYGRLSGRDRDDMIAGARVEV 178

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +KK+PADF+LWK STP +PGW+SPWGRGRPGWHIECSAM   +LG+  DIHGGG+DL 
Sbjct: 179 APYKKDPADFVLWKPSTPEQPGWDSPWGRGRPGWHIECSAMIEKHLGETIDIHGGGIDLQ 238

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS CA      A  W+HNGF+N+   KMSKS GN + ++ELL         
Sbjct: 239 FPHHENELAQSSCAHGHTPLARFWLHNGFVNMGSEKMSKSLGNVLLVHELLAQA------ 292

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVL 352
            P   +RLA+L  HYR+P+D++ + L +A+ +L +           +   +      A +
Sbjct: 293 -PGEAVRLALLNAHYRQPLDWSDEGLAQAKRMLDRLYGALRALSDVKAEPTNDAAPDAFM 351

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI-EVCKEHLNKNI 405
            AL +DLNT  A+  L  LA+ +    D      L      +  +LG+ E+  E      
Sbjct: 352 EALADDLNTPKALAVLFDLAKRANTETDPGTKAQLKAALIGAGRLLGVLEMDPEAWFAGA 411

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             A       +E+L+  R    K K F+ AD IR  L   G  +ED      G + T W+
Sbjct: 412 GAASHIDGEEVERLIAARNAARKAKDFAEADRIRGALAEMGVAIED------GPQGTSWR 465


>gi|222475063|ref|YP_002563478.1| cysteinyl-tRNA synthetase (cysS) [Anaplasma marginale str. Florida]
 gi|255003041|ref|ZP_05278005.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|222419199|gb|ACM49222.1| cysteinyl-tRNA synthetase (cysS) [Anaplasma marginale str. Florida]
          Length = 466

 Score =  343 bits (880), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 279/484 (57%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VVYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL     G 
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSNGVDG- 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIID---- 348
                 VIR   L THYR+P+D+  + + +A+  L+K       +     S G+ D    
Sbjct: 292 -----EVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEH 400
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G+     +  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 401 LNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L     +     I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|255004163|ref|ZP_05278964.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 466

 Score =  343 bits (879), Expect = 4e-92,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 279/484 (57%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSGCVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL     G 
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSNGVDG- 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIID---- 348
                 VIR   L THYR+P+D+  + + +A+  L+K       +     S G+ D    
Sbjct: 292 -----EVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEH 400
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G+     +  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 401 LNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L     +     I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|167765721|ref|ZP_02437774.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
 gi|167712594|gb|EDS23173.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
 gi|291559857|emb|CBL38657.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 467

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 260/475 (54%), Gaps = 53/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  + P  + MYVCGPTVY++ HIGNARPMI+FD + R   Y   E 
Sbjct: 1   MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  +       + I  +  ++  +D   L     THQPR
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVTA------TEIAERYIKECKQDMEALNIKPATHQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  GHAYE +  + F T S  +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     E  W+SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKEDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  EK AN W+HNGFLN+  +KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEACNG-EKFANYWMHNGFLNINNKKMSKSAGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL--------------SKWPQTSTSK--- 344
           +P  VIR  ML  HYR P++F+   +  A+  L              +K    S SK   
Sbjct: 285 YPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCREMSAKEETGSLSKEET 344

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASA 389
                  ++      A+ +D NT  A+ A+ ++ RES              +L +     
Sbjct: 345 EHFANIEVLVKKFEDAMEDDFNTADAVSAIFEIVRESNSTVKDFSADYAKKILKVLEDLC 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGIE  KE    +  I   KL++ER    K K F+ AD IR QL  +G +L+D
Sbjct: 405 SVLGIETTKEEEILDEEIE--KLIEERQAARKNKDFARADEIRDQLLEQGIVLKD 457


>gi|254994905|ref|ZP_05277095.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
          Length = 466

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 199/484 (41%), Positives = 279/484 (57%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL     G 
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSNGVDG- 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIID---- 348
                 VIR   L THYR+P+D+  + + +A+  L+K       +     S G+ D    
Sbjct: 292 -----EVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEH 400
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G+     +  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 401 LNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L     +     I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|254420661|ref|ZP_05034385.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186838|gb|EDX81814.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 469

 Score =  343 bits (879), Expect = 5e-92,   Method: Compositional matrix adjust.
 Identities = 191/485 (39%), Positives = 276/485 (56%), Gaps = 48/485 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I++TL R+   F+  DP+ + +YVCGPTVYD+AHIGNARP +VFDVL RLLR  YG  
Sbjct: 3   LHIHDTLHREKRLFEPRDPNRVTLYVCGPTVYDYAHIGNARPPVVFDVLVRLLRRTYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI ++A +E   +PI +    +T++    ++ D   L    P   P 
Sbjct: 63  HVIYARNVTDVDDKINQKAARE--GVPIGE----VTARYEAAYLADMGLLNVSPPDLAPH 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++IP ++  IQ I+  G AY A   ++FD SS P+YG+ S R +D+   G RV    +
Sbjct: 117 VTDYIPAIVAQIQAIVDAGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM    LG   DIHGGG+DL+FPH
Sbjct: 177 KKNPHDFVLWKPSKPDEPSWPSPWGEGRPGWHIECSAMIEQALGLPIDIHGGGIDLVFPH 236

Query: 245 HENEIAQSCCA------DRI-EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           HENEIAQ  CA      D+  ++ A  W+HNGFL ++  KMSKS GN + +++L++    
Sbjct: 237 HENEIAQGVCAHGHAQGDKAHDEYARYWMHNGFLTVDAEKMSKSVGNVLLLHDLVQAM-- 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGI----IDPAV- 351
                P  V+R A+L  HYR+P+D+    L +++  L + +     S G+    +DP   
Sbjct: 295 -----PGEVVRWALLSAHYRQPLDWNQGLLDQSKKSLDRLYGALHRSSGVEVLDLDPPAD 349

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKN---HDLLPI------FNASAHILGI------E 395
            + ++ +DLNT  A+ +L  L+ E  +     DL  +        A A ILG+       
Sbjct: 350 FMKSIEDDLNTPGAMASLFALSSEIERGMTAGDLDAVAQARARLMACASILGVLQSDPAA 409

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +  ++  + I +E L+++R      K +  AD IR +L +   ++ D   PD      
Sbjct: 410 WLEGDVSDALRIEVEALLEQRAAARAAKDWPEADRIRDRLNALNVVVMD--GPDGAT--- 464

Query: 456 RWKQK 460
            W+ K
Sbjct: 465 -WRMK 468


>gi|302382798|ref|YP_003818621.1| cysteinyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193426|gb|ADL00998.1| cysteinyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 469

 Score =  342 bits (877), Expect = 7e-92,   Method: Compositional matrix adjust.
 Identities = 185/467 (39%), Positives = 262/467 (56%), Gaps = 42/467 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++TL R+   F   DP  + +YVCGPTVYDFAHIGNARP +VFDVL RLLR  YG + V
Sbjct: 5   LHDTLHREKRAFVPRDPERVTLYVCGPTVYDFAHIGNARPPVVFDVLVRLLRREYGAESV 64

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y RN+TD+DDKI  +A +E   +PI D    +T++    ++ D + L    P   P  T
Sbjct: 65  IYARNVTDVDDKINAKAHRE--GVPIGD----VTARYEAAYLADMSALNVTPPDIAPHVT 118

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            H+  ++  I  I+  G AY A   ++FD SS P+YG+ S R +D+   G RV    +KK
Sbjct: 119 GHMDAIVRQIGEIMDQGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVAPYKK 178

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF+LWK S P EP W SPWG GRPGWHIECSAM    LG   DIHGGG+DL+FPHHE
Sbjct: 179 NPHDFVLWKPSKPDEPSWPSPWGDGRPGWHIECSAMIEQTLGLPIDIHGGGIDLVFPHHE 238

Query: 247 NEIAQSCC-------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           NEIAQ  C       AD  +  +  W+HNGFL ++  KMSKS GN + +++L++T     
Sbjct: 239 NEIAQGVCAHGHAHDADSHDAYSRYWMHNGFLTVDAEKMSKSVGNVLLLHDLVQTI---- 294

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQTSTSKGIIDPAVL 352
              P  V+R A+L  HYR+P+D+    L ++          L +    +    +  P  L
Sbjct: 295 ---PGEVVRWALLSAHYRQPLDWNQSLLDQSRKNLDRLYGALRRAEAVAPLGDMPSPEFL 351

Query: 353 SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFN----ASAHILGIEVC------ 397
           +A+ +DLNT  A+  L  L+ E     +  +H  + I      AS+ ILG+ +       
Sbjct: 352 TAISDDLNTPGAMATLFALSSEIERAMTAGDHHAVGIAKAELLASSRILGVLLSTPDQWF 411

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   +  +   +E L+ ER+     K ++ AD IR +L +   ++ D
Sbjct: 412 EGGADDALKAEVEGLLAERVTARAEKNWAEADRIRDRLTALNVVVMD 458


>gi|119476779|ref|ZP_01617089.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450035|gb|EAW31271.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 455

 Score =  342 bits (877), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 185/458 (40%), Positives = 255/458 (55%), Gaps = 37/458 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+       F+ I P  + MYVCGPTVY+  HIGNARP++VFD LYR+L+  Y    V
Sbjct: 5   VYNSYTGTKEAFEPIKPDTVTMYVCGPTVYNRVHIGNARPVVVFDTLYRVLKTLY--SSV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y RNITDIDDKI+  A+         + I+ I+S+    +  D   L  L P   P AT
Sbjct: 63  IYARNITDIDDKIMAAAKAG------GETIAAISSRYATAYFDDMAELNNLPPDIIPYAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           +H+ +M+ +IQ +I  GHAYEA + I+FD  S+  YG  ++R +++   G RV    +KK
Sbjct: 117 DHVGEMVAMIQTLIDKGHAYEAESHILFDVKSMSGYGKLAKRSLEDMLAGARVDVADYKK 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
              DF+LWK ST  EPGW+SPWGRGRPGWH+ECSAM   +LG   DIHGGG+DL FPHHE
Sbjct: 177 YAGDFVLWKPSTDEEPGWDSPWGRGRPGWHLECSAMIEKHLGNTIDIHGGGIDLQFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NE+AQS CA   E     W+HN ++N++G KMSKS GNF  + +LL+        +P  V
Sbjct: 237 NELAQSTCAHDGEPFVRYWMHNAYINIDGEKMSKSLGNFRMVKDLLD-------HYPGEV 289

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKGII---DPAVLSALYN 357
           +R ++L  HYR  ++F+   L  A+  L       +  +T+    +I   D  V  AL +
Sbjct: 290 LRFSILSAHYRSELNFSADALDSAQKTLDNLYGVLRSVETTDVDPVIELSDSKVYKALLD 349

Query: 358 DLNTVSAIQALHKLAR-----ESTKNHDLLPIFNASAHILGI--------EVCKEHLNKN 404
           DLNT  AI+ +H LA+            L      SA ++GI         + K      
Sbjct: 350 DLNTPIAIREIHALAKAMKSASGETQQRLKSELLKSAALMGILQQDPDEWLMVKAGEGDL 409

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
             I +E  V E     + K +  AD IR +L+ +G IL
Sbjct: 410 SDIEVENQVVEMQQARQQKDYKHADDIRDRLQQRGIIL 447


>gi|306842058|ref|ZP_07474730.1| cysteinyl-tRNA synthetase [Brucella sp. BO2]
 gi|306287808|gb|EFM59231.1| cysteinyl-tRNA synthetase [Brucella sp. BO2]
          Length = 452

 Score =  342 bits (877), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 193/453 (42%), Positives = 264/453 (58%), Gaps = 52/453 (11%)

Query: 52  VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           +L+RLLR+ YG + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D 
Sbjct: 1   MLFRLLRHVYGAQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADV 60

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFS 166
             L  L PT QPRAT H+ +M  +I  ++  G AY A + ++F  S++     P YG+ +
Sbjct: 61  AALGNLQPTVQPRATEHMDEMRAMIDRLVQRGVAYVAEDHVLFSPSAMNARKGPRYGALA 120

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS 223
           RR +DE   G RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS
Sbjct: 121 RRSLDEMLAGARVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMS 180

Query: 224 SHYL-----GKV---------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
              L     G +         FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNG
Sbjct: 181 MAKLLEPFGGGLKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNG 240

Query: 270 FLNLEGRKMSKSNGNFITINELL-----ETKKFGGRS----WPAPVIRLAMLMTHYREPI 320
           FL +EG+KMSKS GNFITI ++L     +  ++G  +    W     RL+ML THYREPI
Sbjct: 241 FLQVEGQKMSKSLGNFITIRDVLNDGLPQLGEWGDNTVRDRWVGLAARLSMLQTHYREPI 300

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLAR 373
           ++T QRL E+   L +W      +G   P       AV +AL +DLN+ +AI AL    R
Sbjct: 301 NWTAQRLAESADELHRWYGLLRDEGFGAPEKLSQAGAVAAALCDDLNSWAAITAL----R 356

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKK 424
           ++ K+ D+  +    A ++G+         ++ I         AI   + ERL  +  K 
Sbjct: 357 QAFKSRDVAALGEGMA-LMGLFDPYFVTASDVPIFARADVDASAIAARIAERLNFIDAKN 415

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           ++ AD IR +L  +G  L+D K+P  G+R+T W
Sbjct: 416 WAEADRIRDELLQEGVQLKDGKDPATGERITTW 448


>gi|71900828|ref|ZP_00682946.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|71729398|gb|EAO31511.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
          Length = 467

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 189/473 (39%), Positives = 267/473 (56%), Gaps = 51/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG 
Sbjct: 2   SLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y RNITD+DDKI   A+++   +PI    S IT +    + +D  +L    P  +P
Sbjct: 61  -ALRYARNITDVDDKINTAAQEQ--GVPI----SAITERFCAAYREDMKKLGVEPPDIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV    
Sbjct: 114 EATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIAP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FP
Sbjct: 174 YKRDPSDFVLWKPSSYQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++EL+          P
Sbjct: 234 HHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVAKH-------P 286

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
              +R A+L  HYR+P+D+          T+ RL      L+ +P    ++ II   + +
Sbjct: 287 PEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYP----ARAIIPGNIEA 342

Query: 354 ALYNDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIEVC---------- 397
           AL +DLNT  A+  L  LA E+      T +H+   +  A   +    +           
Sbjct: 343 ALDDDLNTPQALAELATLANEARIQLADTTHHEAAEVTTALTRLKAKLLGAGLALGLLQQ 402

Query: 398 ------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  N++    I+ L+  R    + + F  AD IR QL ++G +LED
Sbjct: 403 TPEAWFSQGTNESDETHIQALIDARSAAKQARDFVRADAIRAQLAAEGIVLED 455


>gi|182680844|ref|YP_001829004.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|61252101|sp|Q87EL7|SYC_XYLFT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|182630954|gb|ACB91730.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M23]
          Length = 467

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 189/473 (39%), Positives = 266/473 (56%), Gaps = 51/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG 
Sbjct: 2   SLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y RNITD+DDKI   A+++   +PI    S IT +    + +D  +L    P  +P
Sbjct: 61  -ALRYARNITDVDDKINTAAQEQ--GVPI----SAITERFCAAYREDMKKLGVEPPDIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV    
Sbjct: 114 EATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIAP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FP
Sbjct: 174 YKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++EL+          P
Sbjct: 234 HHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVAKH-------P 286

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
              +R A+L  HYR+P+D+          T+ RL      L+ +P    ++ II   + +
Sbjct: 287 PEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYP----ARAIIPGNIEA 342

Query: 354 ALYNDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIEVC---------- 397
           AL +DLNT  A+  L  LA E+      T +H    +  A   +    +           
Sbjct: 343 ALDDDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQ 402

Query: 398 ------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  N++    I+ L+  R    + + F  AD IR QL ++G +LED
Sbjct: 403 TPEAWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLED 455


>gi|28198209|ref|NP_778523.1| cysteinyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|28056279|gb|AAO28172.1| cysteinyl-tRNA synthetase [Xylella fastidiosa Temecula1]
          Length = 474

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 189/473 (39%), Positives = 266/473 (56%), Gaps = 51/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG 
Sbjct: 9   SLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG- 67

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y RNITD+DDKI   A+++   +PI    S IT +    + +D  +L    P  +P
Sbjct: 68  -ALRYARNITDVDDKINTAAQEQ--GVPI----SAITERFCAAYREDMKKLGVEPPDIEP 120

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV    
Sbjct: 121 EATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIAP 180

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FP
Sbjct: 181 YKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFP 240

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++EL+          P
Sbjct: 241 HHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVAKH-------P 293

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
              +R A+L  HYR+P+D+          T+ RL      L+ +P    ++ II   + +
Sbjct: 294 PEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYP----ARAIIPGNIEA 349

Query: 354 ALYNDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIEVC---------- 397
           AL +DLNT  A+  L  LA E+      T +H    +  A   +    +           
Sbjct: 350 ALDDDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQ 409

Query: 398 ------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  N++    I+ L+  R    + + F  AD IR QL ++G +LED
Sbjct: 410 TPEAWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLED 462


>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 466

 Score =  341 bits (875), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 191/470 (40%), Positives = 267/470 (56%), Gaps = 45/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR      
Sbjct: 2   LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRA--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKII+RA +       N+ I+ +T +      +D+ +L  L P  +P+
Sbjct: 60  NVTYVRNVTDIDDKIIKRANEN------NETIAQLTQRFIDAMDEDSAKLGVLRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M+ +I  +I  G AY  AN ++ +  SS   YG  S + +++ + G RV    
Sbjct: 114 ATEFVDGMLSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP WESPWG+GRPGWHIECSAMSSH+LG+ FDIHGGG DL FP
Sbjct: 174 FKKDPMDFVLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           HHENEIAQS  A   +    +  N W+HNGF+ ++  KMSKS GNF TI  +LE      
Sbjct: 234 HHENEIAQSEAAHSHDGKPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLE------ 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-------- 351
             + A VIR  +L  HYR P++++ Q L +A++ L++         + D A+        
Sbjct: 288 -QYDAEVIRFFILRAHYRSPLNYSDQHLNDAKLALTRLYTALRGVDVSDDAIDWQHPYAA 346

Query: 352 --LSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCK--EHLNKNI 405
               A+ +D NT  A+  L  LA E   TK+ +   +    A +LG+   K  E L    
Sbjct: 347 RFKLAMDDDFNTPEAMAVLFDLANEVNKTKSTEAAGLLKGLASVLGLLSRKSDEFLQAKT 406

Query: 406 -----------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                       + ++ ++ +RL   + K F+ AD IRK+L   G ILED
Sbjct: 407 NANGAANDGAAELDVDAMIVKRLEAKQAKNFAEADRIRKELAEAGIILED 456


>gi|56416697|ref|YP_153771.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|61216132|sp|Q5PB14|SYC_ANAMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56387929|gb|AAV86516.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 466

 Score =  341 bits (874), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 198/484 (40%), Positives = 278/484 (57%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII     E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINATESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL     G 
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSNGVDG- 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIID---- 348
                 VIR   L THYR+P+D+  + + +A+  L+K       +     S G+ D    
Sbjct: 292 -----EVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEH 400
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G+     +  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 401 LNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L     +     I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254781696|sp|B8GNT5|SYC_THISH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 460

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 190/485 (39%), Positives = 270/485 (55%), Gaps = 57/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+N+L R+   F  ++P  +RMYVCG TVYD+ H+G+AR ++VFDV+YR L+    + 
Sbjct: 2   LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+RNITDIDDKII RA +        + I  +T +      +D   L  L P+ +PR
Sbjct: 61  -VTYIRNITDIDDKIIRRAAEN------GEDIRALTDRFIAAMHEDAEALGVLPPSAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M+ +I  ++  G+AY  +N ++ +  +    YG  S +++++ + G RV    
Sbjct: 114 ATEHIDGMLAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DL FP
Sbjct: 174 AKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N W+HNGF+ +   KMSKS GNF T+ E+L         +P
Sbjct: 234 HHENEIAQSEAA-TCEHFVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLA-------RYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A V+R  +L +HYR P++++ + L  A   L++          +DPA           +A
Sbjct: 286 AEVVRYFILSSHYRSPLNYSDEPLDAARAGLTRLYTALRGVQAVDPAGQGEGYRRRFQAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--------------------SAHILGI 394
           + +D NT  A+  L  +ARE  +  D  P   A                     A + G 
Sbjct: 346 MDDDFNTPVAMAVLFDIARELNRLRDEDPAGAAPLAGLLRELGGMLGLLAGDPEAFLKGG 405

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           E     L++    AIE L+ +RL   K K F+ AD IR +L  +G +LED      G   
Sbjct: 406 EAGD--LDE---AAIEALIAQRLAARKAKDFAEADRIRDELAGQGVVLED------GPGG 454

Query: 455 TRWKQ 459
           T W++
Sbjct: 455 TTWRR 459


>gi|221639139|ref|YP_002525401.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254781691|sp|B9KRV8|SYC_RHOSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221159920|gb|ACM00900.1| Cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 519

 Score =  340 bits (873), Expect = 2e-91,   Method: Compositional matrix adjust.
 Identities = 199/500 (39%), Positives = 275/500 (55%), Gaps = 58/500 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R+   F+ ID  N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3   EIRLTNTKSRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKI----IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             VTYVRN TD+DDKI    + R     P   +   I   T +  + + +D   L  L P
Sbjct: 63  GHVTYVRNFTDVDDKINAAALARKDAGDPR-SLEALIRERTDETIRWYHEDMDALGALRP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T +PRAT  I  MI +I+++I  GHAYE    ++F   S  +YG+ S R +D+   G RV
Sbjct: 122 TQEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-------VFD 232
                K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K        FD
Sbjct: 182 EVAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMADGLLMKDLPENERSFD 241

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHHENEIAQS CA    + A +W+HN  L ++G+KMSKS GNF T+ EL+
Sbjct: 242 IHAGGIDLQFPHHENEIAQSRCAHPEGEFAKVWMHNEMLLVDGKKMSKSLGNFFTVRELI 301

Query: 293 ET--KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQT 340
           E   K+F   +   P IRL  L  HYR PID     + +A + L  W          P T
Sbjct: 302 EEYRKQFAVNN-IGPAIRLRFLQGHYRAPIDAARHYIEQASVKLGLWWHFISEHLDAPIT 360

Query: 341 STSKGII--DPAVLSALYNDLNT---VSAIQALHKLARESTKNH-------DLLPIFNAS 388
              +  I     V+ AL +DLNT   V+ I  L    R   +         D L +    
Sbjct: 361 DKDRRDILATSPVIEALADDLNTPLAVTYIDGLVSRLRGGIQKQGYVDAEMDDLEMVAKR 420

Query: 389 AHI----LG--IEVCKEH---------------LNKNISIAIEKLVQERLILLKMKKFSS 427
           A +    LG   +  +EH                + ++ + I +L++ER    K + F+ 
Sbjct: 421 ARVAIEFLGFTFDDLEEHHGPVQLKRLKERQLSASADVGVRIGRLLEERAEARKARDFAR 480

Query: 428 ADYIRKQLESKGFILEDYKN 447
           +D IR +L++ G +++D ++
Sbjct: 481 SDAIRDRLQAAGVLIKDSRD 500


>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [Clostridium sticklandii]
          Length = 466

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 196/487 (40%), Positives = 283/487 (58%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  ++ + I+MYVCGPTVY+F HIGNARP ++FD     + Y   E 
Sbjct: 1   MKIYNTLTRQKETFIPLEENKIKMYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII+RA +E  S PI      +  K   ++ KD   L     T  PR
Sbjct: 60  -VTYVQNFTDVDDKIIKRANEEGIS-PIE-----VAEKYIAEYFKDADALGIKRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  I+++I  G AYE N ++ F++ +   YG  S++ ++E  +G R+     
Sbjct: 113 VTENIENIITFIEDLISKGFAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK     E GW+SPWG GRPGWHIECS MS+ YLG   DIH GG DLIFPH
Sbjct: 173 KKHPIDFALWKAKKEGEIGWQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+HNG++N++ +KMSKS GNF T+ ++L   +F G+    
Sbjct: 233 HENEIAQS-EARSGKQFARYWMHNGYINVDNQKMSKSLGNFFTVRDIL--SEFSGQ---- 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---VLS 353
            VIR  +L  HYR P++F+ + + +A+  + +   +        S +KG ++ +   ++S
Sbjct: 286 -VIRFFLLSAHYRNPVNFSKELILQAKAGMERLANSKERLVFTISHAKGQMNESELELVS 344

Query: 354 ALYN-----------DLNTVSAIQALHKLARES----TKNHDL------LPIFNASAHIL 392
           AL N           D+NT  AI  + +LAR S    T+N  L      L +FN    +L
Sbjct: 345 ALENHRDRFIEAMDDDINTADAISIIFELARFSNTNVTENSSLEWAEKNLSLFNELTGVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            I +  E  + N +  IEKL+++R+   K K F+ AD IR +L+S G  +ED +      
Sbjct: 405 NI-IKAEDTDSNDNEQIEKLIKDRVEAKKNKDFALADAIRDELKSMGIEIEDTR------ 457

Query: 453 RMTRWKQ 459
           + T+WK+
Sbjct: 458 QGTKWKK 464


>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|187629827|sp|A1WT89|SYC_HALHL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 459

 Score =  340 bits (872), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 189/478 (39%), Positives = 270/478 (56%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L      FQ I+P  +R+YVCG TVYDF H+G+AR ++VFD + R LR+   E 
Sbjct: 2   LKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYLRWLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + ++ +T +  +   +D + L    P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAAEN------GEPMTALTDRFIRAMHEDCSALGVEPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  MI LI+ +I  GHAY  +N ++ F  +S P YG  S R+++E + G+R+    
Sbjct: 114 ATERLESMIALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSGRRVEELRSGSRIEPDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP W SPWG GRPGWHIECSAMS   LG  FDIHGGG+DL FP
Sbjct: 174 AKHDPVDFVLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+HNG + ++  KM+KS GNF T+ ++L          P
Sbjct: 234 HHENEIAQSECASG-HRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEH-------P 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALY 356
           A V+RL +L +HYR P+++T   L EA   L +        P  + ++         A+ 
Sbjct: 286 AEVVRLFLLSSHYRSPLNYTGDALDEARGGLERLYNALRGLPAAAPARSQARERFREAMD 345

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGI--EVCKEHLNKNI 405
           +D NT  A+  L   ARE  +  +                   +LG+  +  + +L  ++
Sbjct: 346 DDFNTREALAVLFDGAREINRLREAGDASGAASAAAELRELGAVLGLLQQDPEAYLRGDV 405

Query: 406 SIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + A    IE LV +R    K K F+ AD IR +L+++G  LED   P+     T+W++
Sbjct: 406 ADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARGIELED--TPEG----TKWRR 457


>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|122985612|sp|Q1H417|SYC_METFK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 455

 Score =  340 bits (871), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 196/460 (42%), Positives = 264/460 (57%), Gaps = 36/460 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R    F  I P  + MYVCG TVYD+ H+G+AR M+VFD++ R LR    E 
Sbjct: 2   LKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + I+ +T +      +D  RL    P  +PR
Sbjct: 61  -VTYVRNITDIDDKIIARANEN------GETINALTDRFIAAMNEDAARLGVWRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I +MI +I  +I   HAY A+N ++ +  SS  +YG  S + +++ + G RV    
Sbjct: 114 ATDYIHEMIAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSGKSLEDLRAGERVEVDA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HK++P DF+LWK + P EP W+SPWG GRPGWHIECSAM + +LG  FDIHGGG DL FP
Sbjct: 174 HKRDPMDFVLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEGAHGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIREVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----ID------PAVLS 353
           A V+R  +L  HYR P++++   L +A+  L++   T   + +    ID           
Sbjct: 286 AEVVRFFILRAHYRSPLNYSSHHLDDAKQALTRLYNTLRGRELPQLDIDWRQPEAERFKQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLL--PIFNASAHILGI------EVCKEHLNKNI 405
           AL +D NT  A   L +LA E+ +    +   +  A A  LG+      E  K      +
Sbjct: 346 ALDDDFNTPEAFAVLFELASEANRTGSAVQAALLKALAGQLGLLQRDPDEFLKGEAVAGL 405

Query: 406 S-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           S   IE+L+ ERL   K K F+ AD IR  L ++G ILED
Sbjct: 406 SPDEIERLIAERLAARKCKNFAEADRIRDALTAQGIILED 445


>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
 gi|158448209|gb|EDP25204.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
          Length = 463

 Score =  340 bits (871), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 203/472 (43%), Positives = 261/472 (55%), Gaps = 51/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL R+  EF+ I+   + +YVCGPTVYD+ HIGNARPMIVFD L R L Y   E 
Sbjct: 1   MKILNTLTRRKEEFKPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA  E       DA S+I+ +   +  KD   L     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANAEGV-----DA-SVISERYIAEVKKDMAALNVREATTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  IP MI +++ +I   +AYE N  + F T    +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIPDMIEMVKTLIEKDYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W SPWG GRPGWH+ECS MS  Y+G V DIH GG DLI
Sbjct: 173 IDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFL +   KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGTE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA-----EILLSKWPQTSTSKGI---IDPAVL- 352
           +P  VIR  ML  HYR P++F+ + L EA     E +L+   +  +  GI   +D +V  
Sbjct: 285 YPLQVIRFFMLSAHYRSPLNFSAE-LVEASKNGLERILTAVDRLKSINGIDGDVDKSVAD 343

Query: 353 ----------SALYNDLNTVSAIQALHKLAR--------ESTKN--HDLLPIFNASAHIL 392
                      A+ +DLNT  AI  + +L +        ES+K     +L        IL
Sbjct: 344 EMDAFVKKYEDAMDDDLNTADAISVIFELVKYANVNVTEESSKATVELVLNTIEKLCDIL 403

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           GI    E   + +   IE L++ER    K K F+ AD IR QL S G ILED
Sbjct: 404 GI--ITEKKEEILDSDIEALIEERQAARKAKNFARADEIRDQLSSMGIILED 453


>gi|134281981|ref|ZP_01768687.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134246510|gb|EBA46598.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 444

 Score =  339 bits (870), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 185/446 (41%), Positives = 249/446 (55%), Gaps = 46/446 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++AHIGNARP +VFDVL RLLR+ Y +  V Y RN TD+DDKI   A    
Sbjct: 1   MYVCGPTVYNYAHIGNARPAVVFDVLSRLLRHDYPQ--VVYARNFTDVDDKI--NAAAVA 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +PI      IT +    +  D   L  L+P  +PR T HIP +I LI+ ++  GHAY 
Sbjct: 57  AGVPIG----TITDRYIDAYHADMQALGVLSPELEPRVTEHIPAIIELIETLLARGHAYV 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
               ++F   S P YG  S R+ ++   G RV    +K++P DF+LWK STP  PGW+SP
Sbjct: 113 VQGHVLFHVPSYPEYGHLSGRRTEDMLAGARVEVAPYKRDPLDFVLWKPSTPDLPGWDSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WGRGRPGWH+ECSAM   +LG   DIHGGG DLIFPHHENEIAQ  CA         W+H
Sbjct: 173 WGRGRPGWHVECSAMIGQHLGHTIDIHGGGQDLIFPHHENEIAQGTCAHGT-LYCRTWVH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           N F+ ++G+KMSKS GN + + +LL          P   IRLA+L THYR P+D+  QRL
Sbjct: 232 NSFVTVDGQKMSKSLGNVLLVRDLLAQA-------PGEAIRLALLSTHYRRPLDWNAQRL 284

Query: 328 TEAEILLSKWPQTSTSKGII--------DPAVLSALYNDLNTVSAIQALHKLA------- 372
           + A   L+++ ++ +    +        DP +L AL NDLN   A+  LH L        
Sbjct: 285 SAARQTLTRYYESLSKVAQVAVVPQIAADPQLLEALRNDLNVPGALVRLHVLLTVLDDAD 344

Query: 373 RESTKNHDLLPIFNASAHILGI-----EVCKEHLNKNISIA---------IEKLVQERLI 418
            ++ + H    +   SA +LG+     +     L                I+ L+ ER  
Sbjct: 345 TDAERAHAKSALLT-SAALLGLLQQPPQAALAQLRPAAPATAVQGLGDTRIKALLAEREQ 403

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
             + + F+ AD +R+ LE+ GF +ED
Sbjct: 404 ARRDRDFAKADALRETLEAAGFTIED 429


>gi|88800332|ref|ZP_01115898.1| cysteinyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88776909|gb|EAR08118.1| cysteinyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 461

 Score =  339 bits (870), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 183/465 (39%), Positives = 266/465 (57%), Gaps = 38/465 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L  +   F+  +P N+ +YVCGPTVY++ HIGN R    +D+L+R+L   Y + 
Sbjct: 3   LKLHNSLTGQKEHFEPQNPDNVTLYVCGPTVYNYIHIGNGRSAANYDLLFRVLNALYPK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RN TD+DDKI   A+ E   I      S+   K  Q + +D  +L  L PT  PR
Sbjct: 62  -VTYARNFTDVDDKINAAAKDEGVDI------SVFAEKYMQAYDEDMAKLGNLEPTIVPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  GHAY A+  ++F   S  +YG  S+R  ++   G RV    +
Sbjct: 115 ATEHIGDIITTIEALIERGHAYAADGHVLFAVDSFDDYGKLSKRNTEDMIAGARVEVASY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S+   PGW+SPWGRGRPGWHIEC+AM   +LG+  DIHGGG DL+FPH
Sbjct: 175 KKNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECTAMIQKHLGETIDIHGGGTDLLFPH 234

Query: 245 HENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE+AQ +CC+D     A  W+HN  L++EG KMSKS GNFI + ++L  +       P
Sbjct: 235 HENELAQGTCCSDHSGGYAKYWVHNAMLDIEGEKMSKSLGNFIVLRDILNEQ-------P 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVLSAL 355
             +IRLA+L  HYR  ++++ Q L ++  LL +            +T   I D    + L
Sbjct: 288 PELIRLALLTAHYRSNMNWSEQLLHQSRSLLDRLYTIKRDGDALITTDIDIRDTEFFAML 347

Query: 356 YNDLNTVSAIQALHKL------ARESTKNHDLLPIFNASAHILGI-----EVCKEHLNKN 404
            +DLNT  A   LH+L      A    +   L    +A A  +G+     +   +  + +
Sbjct: 348 LDDLNTPKAFANLHELTTRFFKAESDDERAALKSEIHAIADFIGVMQMDAQAWFQGTSDD 407

Query: 405 ISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            ++   AIE L++ER+   + K F+ AD IR QL ++G  ++D +
Sbjct: 408 SALSADAIEALLEERVAAKEAKDFARADEIRDQLAAEGIQIKDTR 452


>gi|323705641|ref|ZP_08117215.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535118|gb|EGB24895.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 464

 Score =  339 bits (869), Expect = 6e-91,   Method: Compositional matrix adjust.
 Identities = 189/488 (38%), Positives = 272/488 (55%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  ++ + + MYVCGPTVY+F HIGNAR  IVFD + R L Y  G K
Sbjct: 1   MKIYNTLTRKKEEFVPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I+R+ +E      N  +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VNYVQNFTDIDDKLIKRSHEE------NTTVKELADRYIEEYFKDADSLGIKRATFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  ++ +I  G AYE +  + +DT+   +YG  S + IDE K G R+     
Sbjct: 113 ATENIKEIIEFVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNED 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK +   EP W+SPWG+GRPGWHIECS MS+ +LGK  DIH GG DLIFPH
Sbjct: 173 KKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKFLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  E  A  W+H G+LN+   KMSKS  NF T+ +++         +  
Sbjct: 233 HENEIAQSEAANDAE-FAKYWMHIGYLNINNEKMSKSKNNFFTVRDVIS-------QYDP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPA------------- 350
            V+R  MLM+HYR PI+++   + +A+    +   T  + + ++D A             
Sbjct: 285 EVLRFFMLMSHYRNPINYSQDLIEQAKNGYLRLSNTVYNLQHLLDVAEDRQLSDEEKAYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  + ++ R+   N D          +L +F   + +
Sbjct: 345 EKYEEYRRKFEEAMDDDFNTADAISVIFEMVRDINSNIDGNSPKELIKYILDVFLNLSSV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   K+ L   +   I++L+++R    K K ++ AD IR +L+ +G +LED  N    
Sbjct: 405 LGITYKKKEL---LDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVLEDTPNG--- 458

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 459 ---VRWKR 463


>gi|71275651|ref|ZP_00651936.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71897805|ref|ZP_00680031.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|170729530|ref|YP_001774963.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71163542|gb|EAO13259.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71732360|gb|EAO34414.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|167964323|gb|ACA11333.1| Cysteine--tRNA ligase [Xylella fastidiosa M12]
          Length = 467

 Score =  339 bits (869), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 191/473 (40%), Positives = 267/473 (56%), Gaps = 51/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG 
Sbjct: 2   SLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y RNITD+DDKI   A+++   +PI    S IT +    + +D  +L    P  +P
Sbjct: 61  -ALRYARNITDVDDKINTAAQEQ--GVPI----SAITERFCAAYREDMKKLGVEPPDIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV    
Sbjct: 114 EATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIAP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FP
Sbjct: 174 YKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A IW+HNG LN EG KMSKS GN  T++ L+ TK       P
Sbjct: 234 HHENEIAQSRCAHGSSTFARIWMHNGMLNFEGAKMSKSLGNIETVHGLV-TKH------P 286

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
              +R A+L  HYR+P+D+          T+ RL      L+ +P    ++ II   + +
Sbjct: 287 PEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRELAAYP----ARAIIPGNIEA 342

Query: 354 ALYNDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIEVC---------- 397
           AL +DLNT  A+  L  LA E+      T +H    +  A   +    +           
Sbjct: 343 ALDDDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQ 402

Query: 398 ------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  N++    I+ L+  R    + + F  AD IR QL ++G +LED
Sbjct: 403 TPEAWFSQGTNESDETHIQALIDARSAAKQARDFVRADAIRAQLAAEGIVLED 455


>gi|197103884|ref|YP_002129261.1| cysteinyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|229470556|sp|B4RE90|SYC_PHEZH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|196477304|gb|ACG76832.1| cysteinyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 470

 Score =  338 bits (868), Expect = 7e-91,   Method: Compositional matrix adjust.
 Identities = 164/383 (42%), Positives = 235/383 (61%), Gaps = 26/383 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T+ R   +F   DP  + MYVCGPTVY++AHIGN RP++VFD+L+R+LR  YGE 
Sbjct: 3   LKLYDTMTRAKRDFVPSDPERVTMYVCGPTVYNYAHIGNFRPVVVFDLLFRVLRALYGED 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y  N+TD+DDKI  +A +E   +PI     ++  +    +  D   L  LAPT QP+
Sbjct: 63  HVLYAANVTDVDDKINRKAAEE--GVPIG----VVAERYLAAYNADARALGALAPTFQPK 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  ++ +I  ++ +G AY A   ++F T + P+YG  S R +++   G RV    +
Sbjct: 117 VTETMDAIVGMIGRLVDNGAAYAAEGHVLFSTEAFPDYGKLSGRPLEDLIAGARVDVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF+LWK S P EP WESPWG GRPGWHIECSAM    LG   DIHGGG+DL+FPH
Sbjct: 177 KKDPRDFVLWKPSKPGEPEWESPWGPGRPGWHIECSAMIEEALGLPIDIHGGGIDLVFPH 236

Query: 245 HENEIAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           HENE+AQ  CA       +  A  W+HNGFLN+   KMSKS GN    ++LL+T      
Sbjct: 237 HENELAQGVCAAHPHGHGQTYARYWLHNGFLNMAEEKMSKSVGNVALAHDLLKT------ 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAV 351
            WP   +R A+L   YR+P+++T   + +A+  L +          P  + ++  +DP V
Sbjct: 291 -WPGEALRWALLSGQYRQPLEWTDTLIEQAKSALDRLYRVLDDAARPGDAAAEPFVDPRV 349

Query: 352 LSALYNDLNTVSAIQALHKLARE 374
            +AL++DLNT +A+ AL +++ E
Sbjct: 350 EAALHDDLNTPAAMAALFQISDE 372


>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 462

 Score =  338 bits (868), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 193/464 (41%), Positives = 270/464 (58%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R    F  I+P  +RMYVCG T+YD+ HIG+AR M+ FDV+YR L+    E 
Sbjct: 4   LQIYNSLTRSKEVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKATGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + IS +TS+ TQ   +DT  L  L P H+PR
Sbjct: 63  -VTYVRNITDIDDKIINRAAEN------GEPISSLTSRFTQYMHEDTCALGILPPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P+M+ LI  +  +G AY++ + ++ +       YG  S + +D+ + G RV    
Sbjct: 116 ATEYVPEMLELIGKLEKNGLAYQSTDGDVNYSVRDFEGYGKLSGKSLDDLRAGERVDINT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W S WG GRPGWHIECSAMSS  LG+ FDIHGGG DL
Sbjct: 176 GKRDPLDFVLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++L       +
Sbjct: 236 QFPHHENEIAQSEGASH-HPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVL-------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
           S+ A V+R  ++ +HYR P++++   L +A+  L++         + D AV         
Sbjct: 288 SYDAEVLRFFIIRSHYRSPLNYSDAHLDDAKNALTRLYTALKDVDVKDQAVDWDSEYAKR 347

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGI--EVCKEHLNKNIS 406
             SA+ +D NT  A+  L +LA E  + H  +L     A A +LG+     ++ L  + +
Sbjct: 348 FASAMNDDFNTPEAVAVLFELANEVNRTHLAELGSQLKALAGVLGLLERDPRQFLQGDGA 407

Query: 407 IA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +       IE  +Q R+   K K F+ AD IR +L  KG +LED
Sbjct: 408 VDEGEEKWIESQIQARIDAKKAKNFAEADKIRSELLEKGIVLED 451


>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314719|sp|Q0AJJ4|SYC_NITEC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 467

 Score =  338 bits (868), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 196/488 (40%), Positives = 278/488 (56%), Gaps = 54/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL R   EF  + P  ++MYVCG TVYD  H+G+AR ++VFD + R L+    E 
Sbjct: 2   LKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQTLDYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA + H      +    +T++  Q   +D   L  ++P+ +PR
Sbjct: 61  -VTYVRNITDIDDKIIRRALENH------EPFGALTARYIQAMEEDAAALGIISPSFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  M+ +I++++  G AY ANN ++ +D    P YG  S + +D+ + G RV    
Sbjct: 114 ATECIESMVTMIESLLSKGLAYVANNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAMS HYLG+ FDIHGGG DL FP
Sbjct: 174 NKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS          N W+HNGF+ ++  KMSKS GNF T+ E+L       R  P
Sbjct: 234 HHENEIAQSEGV-HGHPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVL------ARYQP 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL------------SKWPQTSTSKGIID--- 348
             V+R  ++  HYR P++++   L +A   L            S+      +   ID   
Sbjct: 287 E-VVRFFIVRAHYRSPLNYSDAHLNDARNALERLYTALKNHAPSQAQAAEEATATIDWVN 345

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARES--TKNHDLLPIFNASAHILGI--EVCKEH 400
                  ++A+ +D NT  A+  L  LA E+  T N     +  A   ILG+  +  +++
Sbjct: 346 DGYAQRFMAAMNDDFNTPEAVAVLFDLASEANRTGNSHYASLLKALGGILGLLQQSPRQY 405

Query: 401 L-------NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           L       N + SI  IE+++Q+RL   K K F+ AD +R+QL   G ILED      G 
Sbjct: 406 LQHPAHPQNDHHSIEEIERMIQQRLQARKEKNFAQADALRQQLAEAGIILED------GP 459

Query: 453 RMTRWKQK 460
           + T W+++
Sbjct: 460 QGTTWRRQ 467


>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 479

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 200/479 (41%), Positives = 272/479 (56%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  +   F  ++ + +++YVCG TVYD+ HIG+AR  IVFD + R L+Y   + 
Sbjct: 2   LKIFNTLSGEKEVFTPLEDNKVKIYVCGVTVYDYCHIGHARSSIVFDTIRRYLKYKGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII+RA +E      N +I+ IT    +   +D  +L  L P + PR
Sbjct: 61  -VTFVKNFTDVDDKIIKRANEE------NKSINEITDFFIKAHDEDMDKLNILRPDYTPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI L + +I  G AYE+N ++ F   +  +YG  S+R +D+   G RV     
Sbjct: 114 ATEYIDGMIKLCEKLIEKGFAYESNGDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNEI 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWKRS   EPGW+SPWGRGRPGWHIECS MS+  LG  FDIHGGG DLIFPH
Sbjct: 174 KEDPLDFALWKRSKEGEPGWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  E  A  WIHNGF+N+   KMSKS GNF TI ++L       +    
Sbjct: 234 HENEIAQSEAAEGKE-FARYWIHNGFVNINKEKMSKSLGNFFTIRDVL-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------PQTSTSKGIIDPAV 351
            V+R  +L THYR P+DF+ + L EAE  L +               +    KG ID  V
Sbjct: 286 EVLRFFLLTTHYRSPLDFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKGKIDEIV 345

Query: 352 -------LSALYNDLNTVSAIQALHKLAR-------ESTKNHDL----LPIFNASA---H 390
                    ++ +D NT SAI  + +L +       E   + DL    +      A    
Sbjct: 346 DRFKRDFEESMDDDFNTASAISNIFELIKGVNLLLSERLNSEDLNYLKVRFEEVKAIIRD 405

Query: 391 ILGI--EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LGI  +   E    N+SI    ++KL++ER I  + K FS AD IR +L++KG  L D
Sbjct: 406 VLGILTKTASEWFKMNLSIDESELQKLIEEREIARRNKDFSKADAIRNELKTKGVELLD 464


>gi|51473263|ref|YP_067020.1| cysteinyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|61216180|sp|Q68XV4|SYC_RICTY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51459575|gb|AAU03538.1| Cysteine translase [Rickettsia typhi str. Wilmington]
          Length = 457

 Score =  338 bits (867), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 202/457 (44%), Positives = 277/457 (60%), Gaps = 28/457 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YNTL R    F   D +N++MYVCGPTVYD  HIGN+R ++V+D+LYR++   +G+
Sbjct: 2   QLHLYNTLTRTKEVFNPQDHANVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIIIKIFGK 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YVRNITDIDDKII+RA  E   I IND    +T+K T++F  +   L C+ P+ +P
Sbjct: 62  KAVKYVRNITDIDDKIIDRA--ESLGININD----LTNKVTREFHINMAYLGCMLPSIEP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT HI  MI +I+ +I   HAY  +N + FD  S PNY   S R ++E   G R+    
Sbjct: 116 KATEHIDVMIEIIERLIAQDHAYITDNHVYFDVLSAPNYTELSNRNLEEMFEGVRIENSK 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            KKNP DF+LWK +   EP    + SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL
Sbjct: 176 TKKNPQDFVLWKPAKQNEPKNVNFSSPWGLGRPGWHIECSAMSYKYLGENFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHH NEIAQS CA      A  WIHNGFL + G KMSKS GNFIT+ +L++ +  G  
Sbjct: 236 IFPHHTNEIAQSRCAFPSSTYAKYWIHNGFLTVNGEKMSKSLGNFITVRDLMDKQIQG-- 293

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPAVLSALY 356
                V+RL +L +HYR P+D+  + + +A+  L  W     + +  K  +    + +L+
Sbjct: 294 ----EVVRLFLLSSHYRRPLDYNDKAIDDAKKTLDYWYRAIKEINVQKVDLPSDFMQSLF 349

Query: 357 NDLNTVSAIQALHKLARES-TKNHDLLPIFNAS-----AHILGI--EVCKEHLNKNIS-I 407
           +D+NT  AI+ ++  A+       +    FNAS     A+ +G+  +   E  N +I  +
Sbjct: 350 DDMNTPLAIKIINDYAKGVFISKTEAERKFNASAIITCANFIGLMRKTQYEWFNNDIDKL 409

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            I +L+ +RL   K K +  AD IR QL  K  ILED
Sbjct: 410 YINELINKRLKAKKQKNWLLADKIRNQLLEKKIILED 446


>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38372510|sp|Q7VMA0|SYC_HAEDU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 459

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 185/465 (39%), Positives = 266/465 (57%), Gaps = 42/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPAQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N++   +  +   +   D   L  + P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NESCEALVERMIAEMHNDFDALNIMRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ +I++GHAY  A+ +++FD +S   YG+ SR+ +D+ + G RV  K 
Sbjct: 114 ATEHIAEIIAMVEKLIMNGHAYVAADGDVMFDVTSFNQYGALSRQNLDQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWKRS   EP W SPWG GRPGWHIECSAM++  LG+ FDIHGGG DL+FP
Sbjct: 174 AKKNPMDFVLWKRSKENEPSWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA + E   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHQGEYV-NYWLHTGMLTIDKEKMSKSVGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           A  +R   L  HYR  +D++   L  A   L +            Q +  +  +  A  +
Sbjct: 286 AESLRYFFLTAHYRSLLDYSTDNLDLARSALERLYTALRGCDLSVQANGGENYV-TAFKT 344

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT +A+  L ++ARE  K         + L       A +LG+         K 
Sbjct: 345 AMDDDFNTPAALAVLFEMAREVNKLKTEDQQQANALAVCLKELAAVLGLLTQDPDNFLKG 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +N + +  IE L+Q+R      K ++ AD +R +L++   +LED
Sbjct: 405 EVNIDQTAEIEALIQQRNQAKANKNWAVADQVRGKLKAMNILLED 449


>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 461

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 193/482 (40%), Positives = 273/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHPGIVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA + H S         +TS+   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRAAENHESC------DDLTSRMLAEMYKDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I L +++I  GHAY A+N +++F   S  +YG+ SR+ + + + G RV    
Sbjct: 114 ATRHIPEIIELTESLIKRGHAYVADNGDVMFSVESDSDYGALSRQDLSQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  +L  HYR  +++T + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDASVSPAGGEVFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI--EVCKEHLNKN 404
           + +D NT  A   L  +ARE    K+ D      L  +    A ILG+  +  ++ L+  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINCLKSEDLSAANGLAAVLRKLAGILGLLEQDPEQFLHSG 405

Query: 405 ISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + +       IE L+++R    K K ++ AD  R QL   G  LED      G + T W+
Sbjct: 406 VQVDDEDIAKIEALIKQRNDARKNKDWTLADSARDQLNEMGIELED------GPQGTSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|239947072|ref|ZP_04698825.1| cysteinyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921348|gb|EER21372.1| cysteinyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 350

 Score =  337 bits (865), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 169/340 (49%), Positives = 221/340 (65%), Gaps = 15/340 (4%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVYD  HIGN+R ++V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G + V YVRNITD+DDKII+RA  E   I IN+    +T K TQ+F  +   L C+ P+
Sbjct: 61  FGSRAVKYVRNITDVDDKIIDRA--ELLGITINE----LTDKVTQEFHTNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G RV 
Sbjct: 115 IEPKATEHIDVMIEIIERLITKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVRVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  WIHNGFL + G+KMSKS GNFIT+ +L++ +  
Sbjct: 235 ADLIFPHHTNEIAQSRCAFLSSTYAKYWIHNGFLTVNGKKMSKSLGNFITVRDLMDKQIQ 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           G       V+RL +L +HYR P+D+  + + +A+  L  W
Sbjct: 295 G------EVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYW 328


>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|226710842|sp|B5EEK6|SYC_GEOBB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 480

 Score =  337 bits (863), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 203/500 (40%), Positives = 270/500 (54%), Gaps = 66/500 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     EF  I+P  + MYVCG TVYD  HIG+AR  +VFD++YR LR    E 
Sbjct: 3   LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSKGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TDIDDKII RA ++   +P N+    I+ +  ++F  D  RL    PT QP+
Sbjct: 62  -VTYVRNYTDIDDKIINRANRD--GVPYNE----ISERFIKEFDNDMARLMLQLPTFQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I L+Q +I  G AY++ +++ +       Y   S+R +++ + G R+     
Sbjct: 115 ATEHIPEIIALVQTLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+  DIHGGG DLIFPH
Sbjct: 175 KEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+LE       S+ A
Sbjct: 235 HENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILE-------SYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPA-------- 350
            V+R  +L  HYR PIDF+ Q L EAE+ L +  +         + G   PA        
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALAGIYERLASGANTPAGADNAEFV 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHIL 392
                       A+ +D NT  A+  L  L R       T +  LL    A     A +L
Sbjct: 347 EKVAGFAGRFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEQAKAEVAKMAAVL 406

Query: 393 GI---------EVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           GI         +  K+    +I ++   IE L+ ER    K K F   D IR  L  K  
Sbjct: 407 GICDSVPAAFLQRMKDRKTSDIEMSAEEIEALIAERAEARKAKNFKRGDEIRDLLLEKNI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
           +L D        + T WK K
Sbjct: 467 VLLD------SAQGTTWKVK 480


>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 469

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 189/473 (39%), Positives = 269/473 (56%), Gaps = 48/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR      
Sbjct: 2   LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRS--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I  +T +  +   +D+ +L  + P  +P+
Sbjct: 60  AVTYVRNITDIDDKIIKRANEN------GETIGQLTQRFIEAMDEDSAKLGIIRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I  +I  G AY  AN ++ +  ++   YG  S + +++ + G RV    
Sbjct: 114 ATEFIDGMIQMISALIEKGFAYVAANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVDT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWG-----RGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           HKK+P DF+LWK   P EP W+SP+G     +GRPGWHIECSAMSSH+LG+ FDIHGGG 
Sbjct: 174 HKKDPMDFVLWKSVKPNEPSWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           DL FPHHENEIAQS  A        +  N W+HNGF+ ++  KMSKS GNF TI  +LE 
Sbjct: 234 DLQFPHHENEIAQSEAAHSHNGEPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLE- 292

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
                  + A V+R  +L  HYR P++++ Q L +A++ L++   +     + D A+   
Sbjct: 293 ------KYDAEVVRFFILRAHYRSPLNYSDQHLDDAKLALTRLYTSLRGHVVADVAIDWQ 346

Query: 352 -------LSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI-------- 394
                    A+ +D NT  A+  L  LA E   TK+ ++  +  + A +LG+        
Sbjct: 347 QPHSARFKEAMDDDFNTPEAMAVLFDLANEVNKTKSLEVAALLKSLAGVLGLLQRDADAF 406

Query: 395 ---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +V  +     + I I++LV +R    K K F+ AD IRK+L   G +LED
Sbjct: 407 LQGDVAAQLAGTELKIDIDQLVIQRNEAKKTKNFAEADRIRKELADAGIVLED 459


>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|61216300|sp|Q82Y45|SYC_NITEU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 465

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 186/470 (39%), Positives = 266/470 (56%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL R   EF  + P  +RMYVCG TVYD+ H+G+AR ++VFD + R L+   G K
Sbjct: 2   LKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQTL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII RA + H      +  S +T++  Q   +D   L  ++P+ +PR
Sbjct: 61  -VIYVRNITDVDDKIIRRALENH------EPFSALTARYIQAMEEDAMALGVISPSFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  MI +I++++    AY A+N ++ +D    P YG  S + +D+ + G RV    
Sbjct: 114 ATEYVDSMIAMIESLLNRELAYVASNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAMS HYLG  FDIHGGG DL FP
Sbjct: 174 NKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS          N W+HNGF+ ++  KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSEGV-HGHSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLT-------RYQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIID----- 348
             V+R  ++  HYR P++++   L +A   L +             +  +  +ID     
Sbjct: 286 PEVVRFFIVRAHYRSPLNYSDAHLNDARSALERLYTVLKNHAPSQDSEVATAVIDWENNV 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG--------IEV 396
                +SA+ +D NT  A+  L  LA E+ +  D     +  A   +LG           
Sbjct: 346 YARRFMSAMNDDFNTPEAVAVLFDLASEANRTGDSHYASLLKALGGVLGLLQQPPQQYLQ 405

Query: 397 CKEHL-NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              HL +   S+  IE ++Q+RL   K + F+ AD +R+QL   G ILED
Sbjct: 406 YPAHLQDGQYSVEEIENMIQQRLQARKERNFAQADTLRQQLAEAGIILED 455


>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|61216155|sp|Q60BG8|SYC_METCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 465

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 192/470 (40%), Positives = 267/470 (56%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ ++P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR+  G K
Sbjct: 2   LKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRHL-GLK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKII RA      +   + I  +T++  +   +D   L  L P H+PR
Sbjct: 61  -VTYVRNVTDIDDKIIRRA------VENGETIGALTARFIEAMHEDERALGVLPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  ++ +I  +I  GHAY  +N ++ +  +S PNYG  S + +DE + G R+    
Sbjct: 114 ATESIDDILAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSGKNLDELRAGERIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG+DL FP
Sbjct: 174 AKRDPLDFVLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N W+HNGF+ +   KMSKS GNF T+ E+L       R  P
Sbjct: 234 HHENEIAQSEGATG-EHFVNYWMHNGFVRINEEKMSKSLGNFFTVREIL------ARYRP 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------WPQTSTSKGIIDPA 350
             V+R  +L +HYR P++++ + L EA   LS+              P            
Sbjct: 287 -EVVRFFILNSHYRSPLNYSDENLDEAAAALSRLYTALRGLAPDLPLPLGEDRDEGFSSR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN--------HDLLPIFNASAHILGI-------E 395
              A+ +D NT  AI  L  LARE  ++          L     +  ++LG+        
Sbjct: 346 FADAMQDDFNTPEAIAVLFDLAREINRHKAAEPAKAAALGATLKSLGNVLGLLQTDPEAY 405

Query: 396 VCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +     +S A IE  ++ RL   K K ++ +D IR +L+++G ILED
Sbjct: 406 FKSDAGGSGLSDADIETRIRARLEARKAKNWAESDRIRDELKAQGIILED 455


>gi|77917718|ref|YP_355533.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|109894916|sp|Q3A8C9|SYC_PELCD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 481

 Score =  336 bits (862), Expect = 4e-90,   Method: Compositional matrix adjust.
 Identities = 190/501 (37%), Positives = 267/501 (53%), Gaps = 67/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+  +  EF+ + P  + MYVCG TVYD+ HIG+AR  +VFD++YR L++   + 
Sbjct: 3   LRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII+RA +   S         +  +  Q F +D  RL    PT QP+
Sbjct: 62  -VTYVRNYTDVDDKIIKRANERGISS------DTLAGEFIQAFDEDMNRLGLAEPTIQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  ++ L+Q +I  G AYE+  ++ F     P+Y   S+R +DE + G R+     
Sbjct: 115 ATCHIDHIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPGEQ 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRNPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI ++L+T       +  
Sbjct: 235 HENEIAQSEGATG-KPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILQT-------YDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------TSTSKGII 347
            V+R  +L  HYR PIDF+ Q L +A + LS++ +                 TS +   +
Sbjct: 287 EVLRFFILTAHYRSPIDFSDQNLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGATL 346

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLPIFNA------- 387
           +     A+ +D NT +AI  L    R                K   +  +++A       
Sbjct: 347 ENVFREAMDDDFNTAAAIGHLFDAVRTINRLITEKGFRKNREKVAQVRALYDALLKLGGV 406

Query: 388 --------SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   +A +  + +            IE  +++R    K K F+ AD IR +L +KG
Sbjct: 407 LGLFVSDPAAWLKQMNLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRDELAAKG 466

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
             L D      G + T WK +
Sbjct: 467 IQLLD------GPQGTAWKAR 481


>gi|304315919|ref|YP_003851064.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777421|gb|ADL67980.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 464

 Score =  336 bits (861), Expect = 5e-90,   Method: Compositional matrix adjust.
 Identities = 191/473 (40%), Positives = 264/473 (55%), Gaps = 52/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  ++ + + MYVCGPTVY+F HIGNAR  IVFD + R L Y  G K
Sbjct: 1   MKIYNTLTRKKEEFVPLNDNIVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I+R+ +E      N  +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VNYVQNFTDIDDKLIKRSHEE------NTTVKELADRYIEEYFKDADSLGIKRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I  ++ +I  G AY  N ++ +DT+    YG  S + IDE K G R+     
Sbjct: 113 ATENIDDIINFVKKLIDKGFAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARIEVNED 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK +   EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  E  A  W+H G+LN+   KMSKS  NF T+ ++          +  
Sbjct: 233 HENEIAQSEAANDAE-FARFWMHIGYLNINNEKMSKSKNNFFTVRDITS-------QYDP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPAV---LS------- 353
            V+R  ML +HYR PI+F+   L +++    +   T  + + ++D A+   LS       
Sbjct: 285 EVLRFFMLTSHYRNPINFSHDLLEQSKSGFLRLSNTVDNLRHLLDDALDRELSDEEKAYK 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++ R+   N D          +L IF   + +
Sbjct: 345 EKYDEYKRRFEEAMDDDFNTADAISVLFEMVRDINTNIDGNSPKELIEYILDIFLKLSSV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LGI   K  L   +   I+KL+++R    K K ++ AD IR +L+ +G  LED
Sbjct: 405 LGISYKKRDL---LDDEIKKLIEKREEARKAKNWAEADKIRDELKKQGIALED 454


>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 481

 Score =  336 bits (861), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 198/499 (39%), Positives = 271/499 (54%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL      F+   P  + MYVCG TVYD+ HIG+AR  IVFD++YR L+Y   + 
Sbjct: 3   LRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLKY--SDY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +   +         ++ +  Q F +D  RL    PT QP+
Sbjct: 61  DVTYVRNYTDVDDKIINRANERGITS------QQLSEEFIQAFDEDMARLGLDLPTVQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I L++ +I +G AY ++ ++ F   S  +Y   S+R +DE + G R+     
Sbjct: 115 ATEHIDHIIALVERLIANGKAYASDGDVYFAVESFDSYLKLSKRNLDEMQAGARIAPGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP WESPWG+GRPGWHIECSAM   YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRNPMDFALWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI ++L+T       +  
Sbjct: 235 HENEIAQSEAATG-QPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILKT-------YDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------DPAVL 352
            V+R  +L  HYR PIDF+ Q L EA + LS++ +   +   +            D A L
Sbjct: 287 EVVRFFILSAHYRSPIDFSDQNLKEARLGLSRFYEGLQAAAEVLAECPPSDVEATDGAEL 346

Query: 353 SALY-----NDLNTVSAIQALHKLAREST---------KNHDLLP-------IFNASAHI 391
           +A +     +D NT  AI  L +  R            K  DL+         F     +
Sbjct: 347 TAKFREAMDDDFNTAQAIGYLFEGIRTMNRLMATKKFRKKADLVASVRSLYDTFLELGKV 406

Query: 392 LGI--EVCKEHLNK-------NISIAIEK---LVQERLILLKMKKFSSADYIRKQLESKG 439
           LG+     K  LN+       ++ I +E+   L+ ERL   + K F+ +D IR +L  KG
Sbjct: 407 LGMFGSEPKAWLNQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDELAEKG 466

Query: 440 FILEDYKNPDNGQRMTRWK 458
            +L D      G   T WK
Sbjct: 467 ILLLD------GAGGTDWK 479


>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 505

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 197/506 (38%), Positives = 276/506 (54%), Gaps = 81/506 (16%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ +YNT+  KI EF+ I+   ++MYVCGPTVY++ H+GNARP+++FD+L R  +Y   +
Sbjct: 11  KMNLYNTMSNKIEEFKPIEEGKVKMYVCGPTVYNYIHLGNARPVVIFDILARYFKYRGYD 70

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYV+N TD+DDKII+RA +E  S P       +T K  Q F +DT  L  L    +P
Sbjct: 71  --VTYVQNFTDVDDKIIKRANEEGIS-PKE-----VTEKYIQGFFEDTELLNILQDIKRP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           + T ++P++I  I+ +I +G+AYE +  + FD     +YG  S +KIDE ++G RV    
Sbjct: 123 KVTENMPEIIETIEKLIENGYAYEIDGNVFFDVKKYEDYGKLSNQKIDELEIGARVDIME 182

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K NP DF LWK+    EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DLIFP
Sbjct: 183 IKNNPLDFALWKKKKEGEPYWDSPWGQGRPGWHIECSAMSKKYLGETFDIHGGGQDLIFP 242

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A  W+HNGF+ + G KMSKS GNF  + E+L   KF G    
Sbjct: 243 HHENEIAQSKCAYH-GHFAKYWVHNGFVQVNGDKMSKSTGNFFLLREIL--GKFSGN--- 296

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSKWPQTSTSKGIIDP 349
             VIRL +L THYR+P++F+ + +                 E  L K      S+ + D 
Sbjct: 297 --VIRLFILSTHYRKPVNFSFEDMENTKKTLQNVISSIRRFEKSLEKLSSGIKSEDVSDE 354

Query: 350 AV------------------LSALYNDLNTVSAIQALHKLAREST-------------KN 378
            +                  + A+  D+NT  A+  +    RE+              +N
Sbjct: 355 KINEINKVFKEKIKSFDVKFIGAMDEDMNTPQALSTIFDQIRETNRFCDDIEKILDKERN 414

Query: 379 HDLLPIFNAS-----------AHILGIEVC------KEHLNKNISIAIEKLVQERLILLK 421
                +F A              +LG+ +       K+ L+KN+   IE L++ R    K
Sbjct: 415 DSSFLLFEALELSYKNLKTKIEDVLGVLLMDEKKENKDDLSKNL---IELLIKIRTEARK 471

Query: 422 MKKFSSADYIRKQLESKGFILEDYKN 447
            K FS +D IR +L+  G  ++D K+
Sbjct: 472 EKNFSLSDEIRDELKKIGVEIKDNKD 497


>gi|68736678|sp|Q9PEN3|SYC_XYLFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 467

 Score =  335 bits (860), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 189/473 (39%), Positives = 262/473 (55%), Gaps = 51/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG 
Sbjct: 2   SLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y RNITD+DDKI   A+++   +PI    S IT +    + +D  +L    P  +P
Sbjct: 61  -ALRYARNITDVDDKINTAAQEQ--GVPI----SAITERFCAAYREDMKKLGVEPPDIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV    
Sbjct: 114 EATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIAP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FP
Sbjct: 174 YKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++ L+          P
Sbjct: 234 HHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHGLVAKH-------P 286

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
              +R A+L  HYR+P+D+          T+ RL      L+ +P      G I+    +
Sbjct: 287 PEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPAHPFIPGNIE----A 342

Query: 354 ALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIEVC----------- 397
           AL +DLNT  A+  L  LA E     +   H       A+   L  E+            
Sbjct: 343 ALDDDLNTPQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGLALGLLQQ 402

Query: 398 ------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  N++    I+ L+  R    + + F  AD IR QL ++G +LED
Sbjct: 403 TPEAWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLED 455


>gi|319786826|ref|YP_004146301.1| cysteinyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465338|gb|ADV27070.1| cysteinyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 458

 Score =  335 bits (860), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 187/477 (39%), Positives = 268/477 (56%), Gaps = 42/477 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++YN+L R++  F  +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  +G 
Sbjct: 2   SLRLYNSLTRQVEAFAPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRHG- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC---LAPT 120
             + Y RNITD+DDKI   A ++   +PI    S+IT +    + +D   L      AP 
Sbjct: 61  -ALKYARNITDVDDKINAAAAEQ--GVPI----SVITDRFAAAYREDMAALGVAGDFAPD 113

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HI QMI + + ++  GHAY A   ++F  +S  +YG  SRR  +E   G RV 
Sbjct: 114 IEPTATGHIAQMIAMCERLVAEGHAYAAEGHVLFSVASFADYGRLSRRDTEEMLAGARVE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+  +LG+  DIH GG+DL
Sbjct: 174 VAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAEAHLGQTIDIHAGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN   +++L+       R
Sbjct: 234 QFPHHENEIAQSQCAHGGAPFARYWLHNGMLNFGGAKMSKSLGNIEKVHDLV-------R 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------TSKGIIDPAVLSA 354
           + P   +R A++  HYR+P++++   + ++   L +   T        +  +I   + +A
Sbjct: 287 AHPPEALRYALISAHYRQPLEWSDALVEQSVRTLDRLYGTLRDLADIEASPVIPAEIEAA 346

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL--------LPIFNASAHILGIEVCKEHLNKNIS 406
           L +DLNT  A+  L ++A E+ K  D           +    A  L  +  +   N+ IS
Sbjct: 347 LDDDLNTPLALAELARIAGEARKATDASERARLKSGLLGAGLALGLLQQAPEAWFNRGIS 406

Query: 407 ----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 I+ LV ER    K + F+ AD +R QL ++G +LED        +  RWK+
Sbjct: 407 NDDDARIQALVDERGAAKKARDFARADALRDQLAAEGILLEDTP------QGVRWKR 457


>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 459

 Score =  335 bits (859), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 186/469 (39%), Positives = 268/469 (57%), Gaps = 44/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY  Y  
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +P
Sbjct: 61  --LRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT HIP+++ +++ +I +GHAY  A+++++FD  S   YG+ SR+ +++ + G RV  K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        +
Sbjct: 233 PHHENEIAQSCCAHSGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVL 352
            +  +R   L  HYR  +++++  L  A   L +            Q + S+  ++ A  
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVQVAGSEQYVE-AFK 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A+  L ++ARE          K + L       A +LG+         +
Sbjct: 344 AAMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              N +    IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 404 GDANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|317126835|ref|YP_004093117.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471783|gb|ADU28386.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 466

 Score =  335 bits (859), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 186/487 (38%), Positives = 271/487 (55%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK+  FQ I+   + MYVCGPTVY++ HIGNARP +VFD++ R L+Y   E 
Sbjct: 3   IQVYNTLSRKVEPFQPIEEGKVSMYVCGPTVYNYIHIGNARPAVVFDMVRRYLQYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +    +P       I  +  + + +DT  L        PR
Sbjct: 62  -VQYISNFTDVDDKIIKAAEEMGEDVPT------IAERFIEAYFEDTAALGVQKADKHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +P++I  I  +I  G+AYE+  ++ F T     YG  S + ID+ K+G+R+     
Sbjct: 115 VTETMPEIIDFIARLIEKGYAYESQGDVYFRTRKFDGYGKLSHQSIDDLKLGSRIEVGDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  W+SPWG GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKSAKEGEIYWDSPWGNGRPGWHIECSAMVKKYLGDTIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +K AN WIHNG++N++  KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSESLNG-KKMANYWIHNGYINIDNEKMSKSLGNFILVHDII-------KKYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------STS 343
            V+R  ++  HYR PI+F+ ++LT A+  L +   T                     +  
Sbjct: 287 EVVRFFIVNAHYRSPINFSDEQLTSAKSGLERIKTTYLNVKHRLSETANLGEDVEKWTKD 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----NASAHIL 392
            G+I    L A+ +D N+ +A+ A+  L        RE   N  +L  F    +  +++L
Sbjct: 347 MGVIHTRFLEAMDDDFNSANAVAAMFDLIKLGNLYLREDHTNKRVLEYFIKQLDDMSYVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + K+   + +   IE L+QER+   K + F+ AD IR  L+ +  ILED   P    
Sbjct: 407 GLTLNKKE--EILDEEIEVLIQERIDARKNRNFARADEIRDLLKEQNIILED--TPQG-- 460

Query: 453 RMTRWKQ 459
             TRWK+
Sbjct: 461 --TRWKR 465


>gi|225026000|ref|ZP_03715192.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
 gi|224956650|gb|EEG37859.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
          Length = 464

 Score =  335 bits (859), Expect = 9e-90,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 262/475 (55%), Gaps = 56/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF  +    + MYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTLTKQKEEFVPVHEGKVGMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E   +P ++    I+ +   +  KD   L     TH P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE--GVPASE----ISERFIAECKKDMEGLNIEPATHNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI +I  +I  G+AYE N  + F T    NYG  S++ +D+ + G R+     
Sbjct: 113 ATEEIDGMIAMISTLIEKGYAYEKNGTVYFRTRKFKNYGQLSKKNLDDMRAGIRIAVSDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF+LWK     EP W SPWG GRPGWHIECS MS  Y+G   DIH GG DL+FPH
Sbjct: 173 KEDAMDFVLWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLVFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  C D  EK AN W+HN FLN++ +KMSKS GNF T+ E+ E        +P
Sbjct: 233 HENEIAQSEACND--EKFANYWMHNAFLNIDNKKMSKSAGNFFTVREISE-------KYP 283

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEA----EILLSKWPQ----TSTSKG 345
             VIR  ML  HYR P++F+          ++R+  A      +++  P+        K 
Sbjct: 284 LQVIRFFMLSAHYRSPLNFSDTLVEASKNGLERILTAIDHLREVIAAAPEGELNVEDQKN 343

Query: 346 IIDPAVLSALY-----NDLNTVSAIQALHKL-------ARESTKNH--DLLPIFNASAHI 391
           + +   L A Y     +D NT  AI A+ +L       A   +K +   LL I      I
Sbjct: 344 LEEANALKAKYEAAMEDDFNTADAIAAIFELVKLANVTAESGSKAYAQQLLDIIVQLCDI 403

Query: 392 LGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LGI  E  +E L+ +    IE L++ER    K K F+ AD IR  L  KG ILED
Sbjct: 404 LGIITEKKEELLDDD----IEALIEERQAARKAKNFARADEIRDLLADKGIILED 454


>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22257048|sp|Q8R7T3|SYC_THETN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 467

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 262/493 (53%), Gaps = 66/493 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ R   EF+ +    + MYVCGPTVY++ HIGNAR  IVFD + R L Y     
Sbjct: 1   MRLYNTMTRTKEEFKPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEY--KGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII RA++E      N     I  +  +++ KD   L     T  PR
Sbjct: 59  TVNYVQNFTDIDDKIINRAKEE------NTTEKEIAERFIEEYFKDADALGIKRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  +  + F+T+   +YG  S + IDE   G RV     
Sbjct: 113 ATEHIDDIIEFIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARVEIDEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPLDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ EL E        +  
Sbjct: 233 HENEIAQSEAA-YDQPFSKYWMHIGYLNVNNEKMSKSKGNFFTVRELTE-------KYDP 284

Query: 305 PVIRLAMLMTHYREPIDFTV----------QRLTEAEILLSKWPQTSTSKGIIDPA---- 350
            V+RL MLM HYR PI+F++          +RL+ A + L      +  + + D      
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLLDQAKSAYERLSNAVVNLKHLANITKDRELSDEEKDLI 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ +  N            +L +F   + +
Sbjct: 345 VKFDEYKKQFEEAMDDDFNTADAISVLFEMAKTANANLSGNSSKKLVEYILEMFLKLSDV 404

Query: 392 LGIEVCKEHLNKNISIAIE-----KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           LG+        KN    IE     +L++ER    K K +  AD IR +L+ +G ILED  
Sbjct: 405 LGLSY------KNAETEIEDEEILRLIEERQKARKEKNWKLADEIRDKLKERGIILED-- 456

Query: 447 NPDNGQRMTRWKQ 459
            P+      RWK+
Sbjct: 457 TPEG----VRWKR 465


>gi|15837597|ref|NP_298285.1| cysteinyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9105929|gb|AAF83805.1|AE003937_9 cysteinyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 474

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 189/473 (39%), Positives = 262/473 (55%), Gaps = 51/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG 
Sbjct: 9   SLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG- 67

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y RNITD+DDKI   A+++   +PI    S IT +    + +D  +L    P  +P
Sbjct: 68  -ALRYARNITDVDDKINTAAQEQ--GVPI----SAITERFCAAYREDMKKLGVEPPDIEP 120

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV    
Sbjct: 121 EATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIAP 180

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FP
Sbjct: 181 YKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFP 240

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++ L+          P
Sbjct: 241 HHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHGLVAKH-------P 293

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
              +R A+L  HYR+P+D+          T+ RL      L+ +P      G I+    +
Sbjct: 294 PEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPAHPFIPGNIE----A 349

Query: 354 ALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIEVC----------- 397
           AL +DLNT  A+  L  LA E     +   H       A+   L  E+            
Sbjct: 350 ALDDDLNTPQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGLALGLLQQ 409

Query: 398 ------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  N++    I+ L+  R    + + F  AD IR QL ++G +LED
Sbjct: 410 TPEAWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLED 462


>gi|269122241|ref|YP_003310418.1| cysteinyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616119|gb|ACZ10487.1| cysteinyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 465

 Score =  335 bits (858), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 185/473 (39%), Positives = 267/473 (56%), Gaps = 46/473 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K YNTL  +  EF+ I+P  ++MYVCGPTVY++ HIGNARP++VFD+L R  R+     
Sbjct: 1   MKFYNTLTNQTEEFKPIEPGKVKMYVCGPTVYNYIHIGNARPIVVFDILARYFRH--KNY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I +A +E  ++        I  +  + F++DT +L   A   +P+
Sbjct: 59  VVEYVQNFTDIDDKMINKANEEGKTV------REIADRYIEAFLEDTKKLNISADIIRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI  I+ +I  G+AYE N +++FD +    YG  S +K D+ + G R+    +
Sbjct: 113 ATEYIEDMIITIEALIDKGYAYELNGDVLFDVTKYSEYGKLSNQKTDQLEAGARIEVGEN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK     EP W++PWG GRPGWHIEC+AMS  Y G  FDIHGGG DLIFPH
Sbjct: 173 KRNPQDFVLWKNKKKGEPFWKAPWGEGRPGWHIECTAMSHKYFGLNFDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA      AN W+HNG++ L+G KMSKS GNF  + ++LE  +F G     
Sbjct: 233 HENEIAQARCA-YGGNFANYWLHNGYIQLDGEKMSKSKGNFFLLRDVLE--EFDGN---- 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------WPQTSTSKGIIDPAVL 352
            V R  +  THYR+PI+F+ + +  A+  L K                +    I++ ++ 
Sbjct: 286 -VFRWFLAGTHYRKPINFSKEDMLAAKAALEKINGALLRAKDFIIENNTKYDNILEGSIK 344

Query: 353 S-------ALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI 394
                   A+ +DLNT  A+  +H+  RE  K  D           +  I +  A++LGI
Sbjct: 345 EFSEKFDQAMEDDLNTPLAVSLIHEFLREINKFIDNYGKSVIIKEAVAVINDRMANVLGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           E+ +  L    S  ++  +  R      K F  +D IR +L   G  L+D K+
Sbjct: 405 ELKESGLEDLSSSLLDLFIYIRKEARSEKNFKLSDLIRDKLSELGIELKDNKD 457


>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254781681|sp|B9LZV4|SYC_GEOSF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 494

 Score =  334 bits (857), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 202/514 (39%), Positives = 269/514 (52%), Gaps = 80/514 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     EF  ++P  ++MYVCG TVYD  HIG+AR  +VFDV+YR   +   + 
Sbjct: 3   LRVYNTLSGNKEEFVPVEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYFCHLGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TDIDDKII RA +E  +        +I+ +  ++F +D  RL    PT QP+
Sbjct: 62  -VTYVRNYTDIDDKIINRANREGVTY------DLISERFIKEFDRDMERLGLKLPTCQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I L+Q +I    AY+A  ++ F      +Y   S R +++ + G R+     
Sbjct: 115 ATEHIDEIISLVQTLIDKDFAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGARIEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIFPH
Sbjct: 175 KRHPMDFALWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +   N W+HNGF+N+   KMSKS GNF TI E+L+        +  
Sbjct: 235 HENEIAQSEAATG-KPFVNYWLHNGFVNINSEKMSKSLGNFFTIKEVLD-------RYDN 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------WPQTSTSKGIIDPAVL 352
            V+R  +L  HYR PIDF+ Q LTEAE  L +                  +   +D + L
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLTEAEAGLERIYKALAAVEETLAAGNGCTGAPVDASSL 346

Query: 353 S-------------------ALYNDLNTVSAIQALHKLAR-------ESTKNHD----LL 382
           +                   A+ +D NT  A+  +  L R       E+    D    L 
Sbjct: 347 NEAEGELFDKTTSISARFGEAMDDDFNTALAMAHVFDLVRCVNRVLSETAGASDNICSLC 406

Query: 383 PIFNAS----AHILGI---------EVCKEHLNKNISIA---IEKLVQERLILLKMKKFS 426
            +  A     A +LGI         E  K     N+ IA   IE+L+ ER    K K F 
Sbjct: 407 TLIKAEVAKIAGVLGIFSSKPASFLERLKSRKAGNLDIAVDEIERLIAERTAARKAKDFK 466

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +D IR QL +K  +L D       Q+ T W  K
Sbjct: 467 RSDEIRDQLAAKNIVLLD------SQQGTTWSVK 494


>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 458

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/466 (40%), Positives = 263/466 (56%), Gaps = 39/466 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDELVDRMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID----PAVLSAL 355
           A  +R   L  HYR  +D+++  L  A    E L +       S   I      A  +A+
Sbjct: 286 AESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGEHYVEAFKTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D NT  A+  L ++ARE          K + L       A +LG+         K   
Sbjct: 346 DDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKGDA 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           N + +  IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 406 NDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPN 451


>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189082065|sp|A5G949|SYC_GEOUR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 494

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 197/500 (39%), Positives = 265/500 (53%), Gaps = 78/500 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     +F  I+P  ++MYVCG TVYD  HIG+AR  +VFDV+YR LR    E 
Sbjct: 3   LRVYNTLTGTKEDFVPIEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYLRSLGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TDIDDKII RA +E        A   I+ +  ++F +D  +L  L PT QP+
Sbjct: 62  -VNYVRNYTDIDDKIINRANREGV------AYDAISERFIKEFDRDMAQLGLLLPTSQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I L+Q +I  G AY+   ++ F       Y   S+R +++ + G R+     
Sbjct: 115 ATEHIPEIITLVQTLIDKGFAYQMGGDVNFCVEKFDPYLKLSKRNLEDMQAGARIEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP WESPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFVLWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+L+        + +
Sbjct: 235 HENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEVLD-------KYDS 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSKGIIDPA 350
            V+R  +L  HYR P+DF+ Q LTEAE                L+  P T   +  ID +
Sbjct: 287 EVLRFFLLSAHYRSPLDFSDQNLTEAETGMERIYKALVAIDETLASNPATGGEE--IDAS 344

Query: 351 VLS-------------------ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPI 384
            L                    A+ +D NT  A+  +  L R       E+ +  + L  
Sbjct: 345 SLGEAERELFDKSGSLPLRFREAMDDDFNTALAMGHIFDLVRCVNRVLSEAKERSNTLSA 404

Query: 385 FNAS--------AHILGIEVC---------KEHLNKNISIA---IEKLVQERLILLKMKK 424
             A         A +LGI            K+     + I+   IE+L+ ER    K K 
Sbjct: 405 LCAQVKANIGKIADVLGIFTSEPASLLTRLKDRKASELDISVEEIERLITERAAARKAKD 464

Query: 425 FSSADYIRKQLESKGFILED 444
           F  +D IR  L  K  +L D
Sbjct: 465 FKRSDEIRDFLLGKNIVLLD 484


>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 469

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/467 (40%), Positives = 263/467 (56%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 12  LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRY--SGY 69

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 70  NLRYVRNITDVDDKIIKRALEN------NETCDELVDRMIAEMHKDFDALNILRPDVEPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 124 ATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 183

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 184 IKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 243

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 244 HHENEIAQSCCAHGGDYV-NYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 295

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID-----PAVLSA 354
           A  +R   L  HYR  +D+++  L  A    E L +       S   I       A  +A
Sbjct: 296 AESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGGEHYVEAFKTA 355

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         K  
Sbjct: 356 MDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKGD 415

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            N + +  IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 416 ANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPN 462


>gi|126668153|ref|ZP_01739115.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627423|gb|EAZ98058.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 464

 Score =  333 bits (855), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 186/478 (38%), Positives = 268/478 (56%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL +K  +F+ I+P  + +YVCG TVYD+ H+G+AR ++ FDV+ R LR+   + 
Sbjct: 2   IRIYNTLSQKKEQFKPIEPGKVGLYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI+ RA +        +  + +T +      +D  RL  L+P  +PR
Sbjct: 61  -VNYVRNITDIDDKILRRADEN------GEVYTCLTERMIAAMHEDEARLGVLSPNAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I+ +I  GHAY A+N ++ F  SS  +YG  S++K+++   G RV  + 
Sbjct: 114 ATAFISDMIAMIETLIAGGHAYAADNGDVYFLVSSFADYGKLSKKKLEDLLAGARVDVEQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF LWK + P E  W SPWG GRPGWHIECSAM++H LG  FDIHGGG DL+FP
Sbjct: 174 AKRSPADFALWKAAKPDEVFWPSPWGNGRPGWHIECSAMANHCLGDTFDIHGGGPDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H G + +   KMSKS GNF TI E++ET       +P
Sbjct: 234 HHENEIAQSECATG-HTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMET-------YP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPAVLS 353
           A V+R  ++ +HYR  +D++   L E+   L+K              + ++   D   + 
Sbjct: 286 AEVVRYFLVSSHYRSQVDYSEDNLIESGRSLTKLYNALRGVTPLASDAVARTAHDTLFVK 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---------HILGIEVCKEHL--- 401
            + +D N   A+  LH LA E  +         A+A          +LG+      L   
Sbjct: 346 RMDDDFNCAGAMATLHALAGEMNQQRRDGDEQAAAASATVLVRLGSVLGLLQQDPELFFQ 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                 N+  +  IE ++Q R    K + F+ AD IR +L ++G IL+D +   + +R
Sbjct: 406 SDSGQGNELSAGQIETMIQSRADARKTRDFAGADQIRDELLARGVILDDSREGTSWRR 463


>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 457

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 189/477 (39%), Positives = 266/477 (55%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ I P    MYVCG TVYD+ H+G+AR ++VFD++ R LR    + 
Sbjct: 2   LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA +        + I  +T++      +D   L  + P  +PR
Sbjct: 61  -LTYVRNITDIDDKIIKRAAEN------GEPIQALTARFIDAMNEDFDALGVIHPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P MI LI+ +I +G AY A N ++ +     P YG  S + +++ + G RV    
Sbjct: 114 ATEHVPGMIALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDV 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W SPWG GRPGWHIECS MS H+LG+ FDIHGGG DL FP
Sbjct: 174 NKRDPFDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEGAHN-HDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----------L 352
           A V+R  +L  HYR P++++   L +A+  L++      +    D A+            
Sbjct: 286 AEVVRFFILRAHYRSPLNYSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEENDYARRFR 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLP--IFNASAHILGI--EVCKEHLNKNISI- 407
            A+ +D NTV A+  L  LA E  +        +  A   +LG+     +E L    +  
Sbjct: 346 QAMDDDFNTVEAMAVLFDLAGEVNRGESAAQAGLLKALGAVLGLLQRAPQEFLQGGSTAA 405

Query: 408 -----AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                AIE L+Q R      K ++ +D IR +L +KG ILED      G + T W++
Sbjct: 406 ELSADAIEALIQARRDARTAKNWAESDRIRDELAAKGVILED------GAQGTTWRR 456


>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|187629847|sp|A1U1Q7|SYC_MARAV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 463

 Score =  333 bits (854), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 185/471 (39%), Positives = 264/471 (56%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL ++   F+ ++P  +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR+   + 
Sbjct: 1   MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI+ RA +        +  + +T +  +   +D  +L  L+P  +PR
Sbjct: 60  -VHYVRNITDIDDKILRRADEN------GEVYTDLTDRMIRAMHEDEAKLGVLSPNEEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  +I +IQ +I  GHAY A+N ++ F   S P+YG  S++K+++   G RV  + 
Sbjct: 113 ATAFIDDIIAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF LWK + P E  W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 173 AKRSPADFALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       + W+H G + +   KMSKS GNF TI E+LE        +P
Sbjct: 233 HHENEIAQSECATG-HTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILE-------KYP 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------DPAV 351
           A V+R  ++ +HYR  +D++   L EA   L+K       +GI+            D   
Sbjct: 285 AEVVRYFLVSSHYRSQVDYSEDNLAEAGRTLTKLYH--ALRGIVPAKEADVAETDHDRRF 342

Query: 352 LSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHILGIEVCKEHLNKN---- 404
              + +D NT  AI  LH +A +     +  D      ++A ++ +      L +N    
Sbjct: 343 AEVMDDDFNTAGAIAVLHAVANDINHYRREGDEEAAKRSAAVLVRLGAVLGLLQQNPEAF 402

Query: 405 ---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                     +  IE ++Q R    K K F+ AD IR  L  KG IL+D +
Sbjct: 403 FQADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSR 453


>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 465

 Score =  333 bits (853), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 189/474 (39%), Positives = 263/474 (55%), Gaps = 54/474 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +   EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDI+DK+I RA +E  ++        +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDIEDKMINRANKEGITV------FELAERFIKEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIPDMIVLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARVDLSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  WIHNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWIHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------WPQTSTS------KGI 346
             +RL ML  HYR+P++F++  + +AE+ L +              +TS+S      K +
Sbjct: 285 EALRLFMLQAHYRKPLNFSLDLIEQAEVALKRIYTCYENLEFLIQNETSSSENNDKLKTV 344

Query: 347 ID---PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGI 394
           I+      + A+ +DLNT  A   L ++ RE   + +            +      ILGI
Sbjct: 345 IEQLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANFCSKETLTFAKDVLKELCSILGI 404

Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +E++ + I   +EK  Q R    K+K F+ AD IR +L+S G+I+ D
Sbjct: 405 LEQYSSKEEYVPQEILDMVEKRNQAR----KLKNFAEADRIRDELKSLGYIVLD 454


>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 459

 Score =  333 bits (853), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 187/467 (40%), Positives = 264/467 (56%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ I MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 60  NVRYVRNITDVDDKIIKRALEN------KETCDQLVDRMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIID------PAVLSA 354
           A  +R   L  HYR  +D++V+ L  A   L +   +       G+ +       A  +A
Sbjct: 286 AESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTSLRGCDVSGVAEGGEHYVEAFKTA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIARELNKLKIEDMAKANGLAVRLKELAGVLGLLEQEPESFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            N + +  IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 406 TNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [marine bacterium HP15]
          Length = 462

 Score =  333 bits (853), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 189/471 (40%), Positives = 266/471 (56%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL ++  EF+ I+P  +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR+   + 
Sbjct: 2   IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI+ RA +     P ++    +T +  +   +D  RL  L+P  +PR
Sbjct: 61  -VNYVRNITDIDDKILRRADENGE--PYDE----LTDRMIKAMHEDEARLGVLSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I +I  +I  GHAY A+N ++ F   S  +YG  S++K+++   G RV  + 
Sbjct: 114 ATAYIDEIIAMIHKLIAGGHAYAADNGDVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF LWK +   E  W SPWG GRPGWHIECSAMS+  LG+ FDIHGGG DL+FP
Sbjct: 174 AKRSPADFALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H G + +   KMSKS GNF TI E++E        +P
Sbjct: 234 HHENEIAQSECATG-HTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIME-------KYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------DPAV 351
           A V+R  ++ +HYR  +D++ + L EA   L++       +GI+            D   
Sbjct: 286 AEVVRYFLVSSHYRSQVDYSEENLAEAGRTLTRLYH--ALRGIVPAKAADVPESEHDERF 343

Query: 352 LSALYNDLNTVSAIQALHKLA------RESTKNHDL---LPIFNASAHILGI------EV 396
             A+ +D NT  AI  LH +A      R   +  D      I      +LG+        
Sbjct: 344 AEAMDDDFNTAGAIAVLHAVANEINQHRRDGREDDAKQSAAILVRLGGVLGLLQQDPEAF 403

Query: 397 CKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +      +S   IE ++Q R    K K F+ AD IR +L  KG IL+D +
Sbjct: 404 FQADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSR 454


>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 467

 Score =  333 bits (853), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 188/471 (39%), Positives = 255/471 (54%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
             +YN L R+   F   +P  +R YVCGPTVYDF HIGNARP IVFDVL R L +     
Sbjct: 3   FAVYNDLTRRKEVFVPQNPGEVRFYVCGPTVYDFFHIGNARPFIVFDVLRRYLEHQ--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDK+I RA +   S+P       +  +    + +D   L     T  PR
Sbjct: 61  TVTYVQNFTDVDDKMIRRAAELGISVPE------LAERFIAAYFEDADALGVRRATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP ++ LIQ I+  GHAY    ++ FD  S P YG  S++ ++E + G RV     
Sbjct: 115 ATEEIPAILELIQAILDRGHAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARVEVDPR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK   P EP W+SPWG GRPGWH+ECSAMS  +LG+  D HGGG DLIFPH
Sbjct: 175 KRHPLDFALWKAQKPGEPAWKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNG+L ++  KMSKS GNF+T  E    K+F     P 
Sbjct: 235 HENEIAQSEAATG-KPFVRYWVHNGYLMIDKEKMSKSLGNFLTARE--ARKRF-----PP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPAV--------- 351
             IRL ML  HYR PI+F+ + L +A    E L + W +   + G    +          
Sbjct: 287 LAIRLFMLSAHYRSPINFSEEGLMQATAAQERLRNGWTELEFALGHRSASAEPDGALRRM 346

Query: 352 --------LSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIE-- 395
                   L+AL +DLNT  AI  +  + +          + DL  +  A    L +E  
Sbjct: 347 LREGRERFLAALDDDLNTAGAIGVVFDVVKGVNSSLGERPDADLEALGQAKTFFLEVEDI 406

Query: 396 --VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +      +++   +++L+QER    K + F+ AD IR +L ++G +LED
Sbjct: 407 LGILGVAPEESLEEDVDRLIQERQAARKGRDFARADAIRDELLARGILLED 457


>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 465

 Score =  333 bits (853), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 188/481 (39%), Positives = 261/481 (54%), Gaps = 67/481 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K   F  I+   +RMY CGPTVY++ HIGNARP IVFDVL R L Y   + 
Sbjct: 1   MKLYNTLTQKKEAFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII R+ +E  +       + +  K   ++ KD   L        PR
Sbjct: 60  -VKFVQNFTDVDDKIINRSIEEGITA------AEVADKYIAEYFKDADALGIRRADVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++H+P++I +I+ +   G AY  +  + +      +YG  S++ ID+ K G R+     
Sbjct: 113 VSDHMPEIIEMIKELEARGLAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK+    EP WESPWG+GRPGWHIECSAMS  +LG+  DIHGGG DLIFPH
Sbjct: 173 KRSPLDFALWKKKKDGEPYWESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLIFPH 232

Query: 245 HENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HENEIAQS   C      K AN W+HNG++N+   KMSKS GNF T+ ++        + 
Sbjct: 233 HENEIAQSEGSCGC----KFANYWVHNGYININNEKMSKSKGNFFTVRDI-------AKH 281

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSKWPQTSTS---- 343
           +   V+R+ MLM HYR P++F+ + L +A              E LL      + S    
Sbjct: 282 YDLEVVRMFMLMAHYRSPVNFSDELLGQAQNALERLYNAKYQMEYLLENNKSEAASEDEK 341

Query: 344 ----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLP 383
                     KG ID     A+ +DLNT  AI A+ +L R++  N             L 
Sbjct: 342 TWMDNLAQYKKGFID-----AMNDDLNTADAIAAIFELVRDTNSNLSEASSREAVKAALD 396

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +F     ++G+   KE    ++   +E L+ +R    K K FS AD IR  L +KG ILE
Sbjct: 397 LFKELTGVIGL-AAKEK-ETDLEAEVEALIAQRQEARKNKDFSLADEIRDALLAKGIILE 454

Query: 444 D 444
           D
Sbjct: 455 D 455


>gi|307266362|ref|ZP_07547900.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918598|gb|EFN48834.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 466

 Score =  333 bits (853), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 264/490 (53%), Gaps = 60/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   E + ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y  G K
Sbjct: 1   MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIDEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSEAAYE-QPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPAVLS------- 353
            V+RL MLM HYR PI+F++  + +A    E LL+          +     L+       
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQANSAYERLLNAVANLKHLANVCKDGGLNEEEKKLM 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ S  N            +L +F   + +
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTSNANLSRNSSKKLVEYILDMFLKLSEV 404

Query: 392 LGIEV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           LG+     +  LN    +A   L++ER    K K +  AD IR +L  KG ILED   P+
Sbjct: 405 LGLSYRGVETELNDEEILA---LIEERQKARKEKNWKLADEIRDRLREKGIILED--TPE 459

Query: 450 NGQRMTRWKQ 459
                 RWK+
Sbjct: 460 G----VRWKR 465


>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 473

 Score =  333 bits (853), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 195/476 (40%), Positives = 275/476 (57%), Gaps = 53/476 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    E  V
Sbjct: 6   LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWE--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII+RA +        + I  +T +  Q   +D  RL CLAP   PRAT
Sbjct: 64  KYVRNITDIDDKIIKRANEN------GETIQALTDRFIQAMNEDAHRLGCLAPDEAPRAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I  ++ +G AY A N ++ F       YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 DKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEAATG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID-------PA 350
             VIR  ++ +HYR P++F+   L EA+  L+++       Q   ++ + D         
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYQQQFNEELTDHFSQIHLER 349

Query: 351 VLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI------- 394
             +A+ +D NT  A+  L +LA+E       +N +   +F ++     +ILG+       
Sbjct: 350 FNAAMCDDFNTAEAMAVLFELAKELNRALKEENAEQAKVFYSTLRHLTNILGLVQHNVDD 409

Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               ++ +E L  + S  IE+L+Q+R+   K K F+ AD IR+ L ++G +LED +
Sbjct: 410 FLRSDIGQEALGLSES-EIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDTR 464


>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 468

 Score =  332 bits (852), Expect = 5e-89,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 275/490 (56%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            ++YN L  +   F  ++   +R YVCGPTVYD+ HIGNARP IVFDV+ R L +   + 
Sbjct: 3   FEVYNDLTNRKEPFVPLEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEHLGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDIDDK+I+RA++      +   +  +  +  + + +D   L     T  P+
Sbjct: 62  -VTYVQNFTDIDDKMIKRAQE------MGITVKELADRFIEAYYQDADALGIRRATVNPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP +I LI+ +I  GHAY+ + ++ FD  S P YG   ++ ++E + G RV     
Sbjct: 115 ATEEIPHIIELIELLIQKGHAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARVEVDPR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK   P EP W+SPWG GRPGWHIECSAM  H+LG   D HGGG DL+FPH
Sbjct: 175 KRHPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNG+L ++  KMSKS GNF+T  +L+  K+F     P 
Sbjct: 235 HENEIAQSEAATG-KPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDLM--KRF-----PP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----W-----------PQTSTSKGIIDP 349
            VIRL ML  HYR PI+F+ + L +A+  L +    W           P TS S+ + + 
Sbjct: 287 LVIRLFMLSAHYRSPINFSEENLRQAQAALERLRNGWAQIRFALDNPPPSTSESRELREQ 346

Query: 350 AVL------SALYNDLNTVSAIQALHKLARESTKNH-------DLLPIFNAS------AH 390
                     A+ +DLNT  A+ A+  L R +T +H       DL  +  AS        
Sbjct: 347 IARYRDDFHRAMDDDLNTAEALGAVFSLIR-ATNSHLSRGDSPDLAALEEASNFLRDVDR 405

Query: 391 ILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           I+G I + ++ L+++    +E L++ER    K + F+ AD IR +L S G +LED   P 
Sbjct: 406 IMGVIGIDEDQLDRD----VEALIEERNAARKARDFAKADAIRDRLSSMGIVLED--TPQ 459

Query: 450 NGQRMTRWKQ 459
                TRWK+
Sbjct: 460 G----TRWKR 465


>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 483

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 271/491 (55%), Gaps = 64/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+  KI EF+ I+ + ++MYVCGPTVY++ H+GNARP++VFD L R   +   E 
Sbjct: 1   MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKGME- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII ++ +E  S       S ++ K  + F +D ++L  L    +P+
Sbjct: 60  -VEFVQNFTDVDDKIINKSMEEGTSA------SEVSEKYIKYFFEDISKLNILESVKRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +IQ +I +G AYE + ++ F+     +YG  S +KI+E ++G R+     
Sbjct: 113 VTENMSEVIEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEI 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+    EP WESPWG+GRPGWHIECSAM+  YLG  FDIHGGG DL+FPH
Sbjct: 173 KKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN W+HNGF+ + G KMSKS GNF  + E+LE  KF G     
Sbjct: 233 HENEIAQSKCAYH-GNFANYWLHNGFIQINGDKMSKSLGNFFLLREILE--KFSGN---- 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLS------------------------KWPQT 340
            VIRL +L THYR+PI+F+ + + + +  L                         K  + 
Sbjct: 286 -VIRLFILSTHYRKPINFSFENMEDTKKALQNIIKSMNKFENIVEKYKNEKIENVKNSEF 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------------------KNHDLL 382
           S      D     A+  D+NT  A+  +    RE+                   K++D L
Sbjct: 345 SQKIDEFDKKFEEAMAEDMNTPQALATIFDQIRETNKFISTNESEFSTIYYEIKKSYDSL 404

Query: 383 PIFNASAHILGIEV---CKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLE 436
                +   + IEV    KE   +N+ +    IE L++ R      K F  +D IR +L+
Sbjct: 405 KAKIENVFGIAIEVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSDEIRDELK 464

Query: 437 SKGFILEDYKN 447
             G  ++D K+
Sbjct: 465 VLGVEIKDNKD 475


>gi|326391118|ref|ZP_08212664.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992817|gb|EGD51263.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 466

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 264/490 (53%), Gaps = 60/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   E + ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y  G K
Sbjct: 1   MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIDEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSETAYE-QPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPAVLS------- 353
            V+RL MLM HYR PI+F++  + +A    E LL+          +     L+       
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQANSAYERLLNAVANLKHLANVCKDGGLNEEEKKLM 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ S  N            +L +F   + +
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTSNANLSRNSSKKLVEYILDMFLKLSEV 404

Query: 392 LGIEV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           LG+     +  LN    +A   L++ER    K K +  AD IR +L  KG ILED   P+
Sbjct: 405 LGLSYRGVETELNDEEILA---LIEERQKARKEKNWKLADEIRDRLREKGIILED--TPE 459

Query: 450 NGQRMTRWKQ 459
                 RWK+
Sbjct: 460 G----VRWKR 465


>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|187629846|sp|A0L4P8|SYC_MAGSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 490

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 199/505 (39%), Positives = 266/505 (52%), Gaps = 73/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL RK   F  + P  + MYVCG TVYD++HIG+AR M+VFDV+ R LR    + 
Sbjct: 10  ITIYNTLGRKKEPFVPMIPGKVGMYVCGVTVYDYSHIGHARVMVVFDVIARHLRVTGFD- 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN TDIDDKII+RA +        ++I  +T +    F +D   L       +P+
Sbjct: 69  -LTYVRNFTDIDDKIIKRANER------GESIQTLTQRYIDAFHQDMAALGVQPADIEPK 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+M+ +I  ++  G AY +  ++ +      NYG  S + +DEQ+ G RV    +
Sbjct: 122 ATEHLPEMMQMIGTLMDKGVAYASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSN 181

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK + P EP W+SPWG GRPGWHIECSAM + YLG  FDIHGGG DLIFPH
Sbjct: 182 KQNPMDFVLWKGAKPEEPQWDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFPH 241

Query: 245 HENEIAQS--CCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLETKKF 297
           HENEIAQ+  C     +   N WIHNGF+N+     E  KMSKS GNF TI +LL     
Sbjct: 242 HENEIAQTEGCTG---QHAVNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLAL--- 295

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQ--------------RLTEAEILLSKWPQTSTS 343
               +P  V+R  +L +HYR P+DF+                 L  A+ LL K P T   
Sbjct: 296 ----YPGEVLRFFILNSHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPGTPIG 351

Query: 344 KGIIDPA---------VLSALYNDLNTVSAIQALHKLAR------ESTKNHDLLP----I 384
           +    PA          L A+ +D NT  AI  L + A+         K+  ++     +
Sbjct: 352 EPADVPAGAPQDLVENYLKAMDDDFNTPQAIAFLFEAAKMLNTAISEQKDPAVIATWARL 411

Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
                H LG+      L     I         AIE L+ ER      K ++ +D IR  L
Sbjct: 412 IRGLGHHLGLAGQDPELWFRSGIGAEQGLQAEAIEALIAERSAARAAKNWAESDRIRDTL 471

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
             +G +LED      GQ  T+W +K
Sbjct: 472 AQQGIVLED------GQHGTQWSRK 490


>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
           16795]
 gi|164604516|gb|EDQ97981.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
           16795]
          Length = 474

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 188/473 (39%), Positives = 261/473 (55%), Gaps = 50/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I+   ++MYVCGPTVY+F HIGNARP I+FD L R L Y   + 
Sbjct: 9   VKLYNTLSRKKEEFKPIEEGKVKMYVCGPTVYNFIHIGNARPFIIFDTLRRYLEYRGYD- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII+R+ +E      N     + +K  +++  D   L     +  P+
Sbjct: 68  -VTFVQNFTDVDDKIIKRSHEE------NITPEEVATKYIKEYFVDADGLGIKRASVHPQ 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  ++ +   G+AY  N ++ FDT    +YG  S  K +E + G R+     
Sbjct: 121 VTDNIEQIIAFVKELEDKGYAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARIEVNDQ 180

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW SPWG GRPGWHIECS MS+ YLG+  DIH GG DL FPH
Sbjct: 181 KRHPMDFVLWKAKKEGEPGWASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQDLKFPH 240

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +N W+HN ++N+   KMSKS GNF T+ E+ E        +  
Sbjct: 241 HENEIAQSE-ARSGKNFSNYWLHNEYINVNNEKMSKSLGNFFTVREISEI-------YDL 292

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVL- 352
            V+RL ML THYR PI+F+ + L +++  L +                 SK   + A L 
Sbjct: 293 EVVRLFMLSTHYRNPINFSDEILNQSKAGLERLYNAKEKAEFTINNLEDSKMTEEEAKLQ 352

Query: 353 -----------SALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                       A+ +D+NT  A+ A+ +LA+    N             L  FN    +
Sbjct: 353 DELASFRQKFIDAMDDDVNTADAVSAIFELAKFMNSNITENSSKEFAQKALDEFNELTGV 412

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L I V K+     +   IEKL+++R    K K F  AD IR+QL  KG +LED
Sbjct: 413 LNI-VNKDKKEDILDEEIEKLIEQRTEAKKNKNFQLADEIRQQLLDKGIVLED 464


>gi|254294732|ref|YP_003060755.1| cysteinyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254043263|gb|ACT60058.1| cysteinyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 461

 Score =  332 bits (852), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 190/467 (40%), Positives = 265/467 (56%), Gaps = 45/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ N+L RK   F   D   + MYVCGPTVY +AHIGN RP +VFD+LYRLLR  YG++
Sbjct: 3   IKLTNSLTRKKEVFIPQDEERVTMYVCGPTVYSYAHIGNFRPPVVFDILYRLLRSKYGDE 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y  N+TD+DDKII+ +          + IS IT K T+ +++D+  L  L P  +P 
Sbjct: 63  AVLYASNLTDVDDKIIKASNDS------GEPISAITEKFTKAYLEDSAALNILEPDFRPT 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A  HIPQMI +++ +    +AY   + + F   S+ +YG  S R +D+   G RV  +  
Sbjct: 117 AVAHIPQMIEMMKKLERKKYAYRTESGLWFHVKSMEDYGKLSGRNLDDMLAGARVDVESE 176

Query: 185 KKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           K++PADF LWK + P EP    W+SPWGRGRPGWHIECSAM    LGK  DIHGGG+DL 
Sbjct: 177 KRDPADFALWKVAKPGEPEDAIWDSPWGRGRPGWHIECSAMIEAVLGKTIDIHGGGIDLQ 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   E  A+ W+HNGFL++E  KMSKS GN    +E+L+        
Sbjct: 237 FPHHENEIAQSECA-HGEIMAHYWLHNGFLDIESEKMSKSIGNVKIPHEMLKETH----- 290

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------WPQTSTSKGIIDPAVLS 353
               V+R+A+L   YR+P+D+T   L + +  L +        W          D AV+ 
Sbjct: 291 --GEVLRMALLSAQYRQPLDWTQALLDQCKATLDRAYGALRRVWDFADIE--YEDIAVIH 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNASAHILGI-----EVC 397
           AL +DLNT  A+  L +++ E+ +  D              IF  +  +LG+     E  
Sbjct: 347 ALCDDLNTPQALAELSRISGEANRAADAGDQEAMAQARADLIF--AGDMLGLLQLTPEEW 404

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ++  + + +  I+ LVQ RL     K ++ AD IR +L ++G  + D
Sbjct: 405 EKGDDGDDAARIDLLVQARLDARANKDWAEADRIRDELAAEGIEIMD 451


>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 474

 Score =  332 bits (852), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 197/494 (39%), Positives = 272/494 (55%), Gaps = 60/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +++ EF+ I    + MYVCG TVYD  HIG+AR  + FDV+YR L++   + 
Sbjct: 2   LKIYNTLGKRLEEFKPIKNGKVGMYVCGVTVYDNCHIGHARSAVAFDVMYRYLKFKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII RA +E   +  N+    I  +   ++ KD  RL    P  +P+
Sbjct: 61  -VTFVKNFTDVDDKIINRANEE--GVSCNE----IAQRYIGEYYKDMYRLNIAKPEVEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I L++ +   G+AYE N ++ +      +YG  S + IDE K G RV     
Sbjct: 114 ATEHINEIIELVRKLQDMGYAYEVNGDVYYRVEKFKDYGKLSGKNIDELKSGARVEINDK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWKRS   EP W+SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLIFPH
Sbjct: 174 KENPLDFALWKRSKENEPKWKSPWGEGRPGWHIECSAMSMKYLGESFDIHGGGEDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  WIHNGF+ +   KMSKS GNF TI ++L  KK+ G++   
Sbjct: 234 HENEIAQSEAATG-KPFARYWIHNGFVRINKEKMSKSLGNFFTIKDIL--KKYDGQT--- 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSK-GIIDPAV----- 351
             +R  +L+THYR PIDF+ + L  A+  L+++         T   K G +D  +     
Sbjct: 288 --LRYFLLLTHYRSPIDFSFEGLDAAKEALNRYYNFIQRLEDTEFEKNGKVDELLEKRLK 345

Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHD---------------LLPIFNASAH 390
                   A+  D N   AI  +  + +   +  D                L   N    
Sbjct: 346 DLLARFEEAMDEDFNAPKAIGEVFSVIKTFNQYLDSITEGDKPKKAYKETFLESMNKIKS 405

Query: 391 ILGI---EVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +LG+         + + I +  +E+ +++R +  K K + +AD IR +L  KG ILED K
Sbjct: 406 VLGVFDTSSASWFIPEGIDVDWVEERIKQRALARKNKDYETADKIRDELNGKGIILEDAK 465

Query: 447 NPDNGQRMTRWKQK 460
                   TRWK K
Sbjct: 466 ------EYTRWKVK 473


>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 459

 Score =  332 bits (851), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 184/469 (39%), Positives = 266/469 (56%), Gaps = 44/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY  Y  
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +P
Sbjct: 61  --LRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVL 352
            +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFK 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A+  L ++ARE          K + L       A +LG+         +
Sbjct: 344 AAMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVCLKELAAVLGLLYQDPEAFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              N +    IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 404 GDANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|229825688|ref|ZP_04451757.1| hypothetical protein GCWU000182_01051 [Abiotrophia defectiva ATCC
           49176]
 gi|229790251|gb|EEP26365.1| hypothetical protein GCWU000182_01051 [Abiotrophia defectiva ATCC
           49176]
          Length = 465

 Score =  332 bits (851), Expect = 7e-89,   Method: Compositional matrix adjust.
 Identities = 196/483 (40%), Positives = 265/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF  ++P  ++MYVCGPTVY+F HIGNARP+I+FD + R   Y   + 
Sbjct: 1   MKIHNTLTNKEEEFIPLEPGKVKMYVCGPTVYNFMHIGNARPIIIFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E  S        II +K       D   L  L  T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANEEGVSSTEISERYIIEAKT------DMEGLNVLPATKNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI +I+ +I  GHAY  N  + F T S   YG  S + ID+ + G R+     
Sbjct: 113 ATEEIDGMIEMIEELIKKGHAYAKNGSVYFRTRSFEEYGKLSNKNIDDLEAGARIAVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EP W SPWG GRPGWHIECS MS  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKPKKEGEPFWVSPWGEGRPGWHIECSVMSKKYLGEQIDIHAGGEDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  W+HNG+L +   KMSKS GNFITI ++        + +  
Sbjct: 233 HENEIAQSEAAND-KDFAKYWMHNGYLRINNEKMSKSLGNFITIRDV-------SKEYDL 284

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEA----EILLSKWPQ---TSTSKGII 347
            V+R  ML  HYR PI+F+          ++R+T A    + LL        T   K ++
Sbjct: 285 GVLRFFMLGAHYRGPINFSHELMEAAKTGLERITNAVANLDFLLESANDRSLTEAEKEVL 344

Query: 348 DPAVL------SALYNDLNTVSAIQALHKLAR--------ESTKN--HDLLPIFNASAHI 391
           D A+       +A+  D NT  A+ A+  L +        ES+     ++  +    + +
Sbjct: 345 DKALAYKADFEAAMDADFNTADAVTAVFNLVKLANSEINTESSSELIKEVRGLIVILSDV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG++V KE   + +   IE L++ER    K K F+ AD IR+ L SKG +LED +     
Sbjct: 405 LGVKVVKE--KEILDEEIEALIKERTEARKSKNFARADEIREILTSKGIVLEDTREGVKW 462

Query: 452 QRM 454
           +RM
Sbjct: 463 KRM 465


>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|171704442|sp|A1AK01|SYC_PELPD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 493

 Score =  332 bits (851), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 193/497 (38%), Positives = 258/497 (51%), Gaps = 73/497 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  +   F  + P    MYVCG TVYD+ HIG+AR  +VFDV+YR L Y     
Sbjct: 3   LRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGY--SGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TDIDDKII RA QE          + I+ +  + F +D  RL    PT +P+
Sbjct: 61  AVTYVRNFTDIDDKIINRANQEGVDY------TTISERYIEAFNQDMARLGLAKPTVEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+  +I +I+ +I  GHAYE++ ++ +   S P+Y   S R +++   G RV     
Sbjct: 115 ATDHMGGIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK S P EP W+SPWG GRPGWHIECSAMS  YLGK FDIHGGG DL+FPH
Sbjct: 175 KRNPMDFALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +     W+HNGF+N+   KMSKS GNF TI E+LE        +  
Sbjct: 235 HENEIAQSEAANGCQ-FVRYWMHNGFVNINSEKMSKSLGNFFTIREVLE-------QYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKGIID 348
             +R  +L  HYR PIDF+ Q L +A+  L +                 P        + 
Sbjct: 287 ETLRFFILSAHYRSPIDFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPVEGAPLP 346

Query: 349 PA--------------VLSALYNDLNTVSAIQALHKLARESTK----NHDLLP------- 383
           PA                 A+ +D NT  A+  L +  R + +    + D  P       
Sbjct: 347 PAGAELHEKLQSLISRFREAMDDDFNTAQALGVLFEAVRATNRFMAESGDQTPATLALLG 406

Query: 384 ----IFNASAHILG---------IEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSS 427
               +F  +  +LG         +E  K+  +  + I+   IE+L+ ER      + F  
Sbjct: 407 QVRRLFAETGDVLGLFTSQPAAWLESIKQAKSDQMEISPQEIEQLIAERAAARTNRDFKR 466

Query: 428 ADYIRKQLESKGFILED 444
            D IR  L  KG  L D
Sbjct: 467 GDEIRDLLLQKGIQLLD 483


>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 465

 Score =  332 bits (851), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 188/470 (40%), Positives = 259/470 (55%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEQGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDI+DK+I RA +E  ++        +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDIEDKMINRANKEGITV------FELAERFIKEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIPDMITLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDLSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWH+ECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQTSTSKGI 346
             +RL ML  HYR+P++F++  + +AE  L +                      ST K  
Sbjct: 285 EALRLFMLQAHYRKPLNFSLDLIEQAESALKRIYKCYENLEYLIRNETGSNSSNSTLKAS 344

Query: 347 IDP---AVLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI 394
           ++      + A+ +DLNT  A   L ++ RE     +T + D+L +   +      ILGI
Sbjct: 345 LEQFKIKFIDAMEDDLNTAEATGYLFEMVREINTHANTCSKDVLILARDTLKELCGILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               E     I + I +LV++R    K K F+ AD IR +L+S G+I+ D
Sbjct: 405 LEQYEQKEDEIPLEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLD 454


>gi|58584937|ref|YP_198510.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|81311609|sp|Q5GRV6|SYC_WOLTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58419253|gb|AAW71268.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 433

 Score =  332 bits (851), Expect = 8e-89,   Method: Compositional matrix adjust.
 Identities = 190/452 (42%), Positives = 265/452 (58%), Gaps = 41/452 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+   TYVRNITDIDDKII  A ++ 
Sbjct: 1   MYVCGPTVYDTAHIGNARSIVVYDVLFQLLKFCYGK--ATYVRNITDIDDKIINAANEKD 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            SI        I++  T+ F +D   + C+ PTH+P+A  +I  +I LI+ ++  GHAYE
Sbjct: 59  SSI------ESISTYYTRAFHEDMRSINCVEPTHEPKAAENIKYIIELIEYLLQSGHAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST----PMEPG 203
           +N  I F   S P YG+ S +KIDE + G+RV    +KK+P DF+LWK +      +   
Sbjct: 113 SNKHIYFSIESYPEYGALSGKKIDELEHGSRVEVGENKKHPGDFVLWKPANDTDYKLSSY 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL FPHHENEIAQ+  A      A 
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQNKSAFAGSMFAK 232

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNG L +   KMSKS  N + + +LL++   G       VIR A+  THYR+P+D+T
Sbjct: 233 YWVHNGSLTVNKEKMSKSLFNIVKVRDLLDSGIKG------EVIRYALFKTHYRKPLDWT 286

Query: 324 VQRLTEAEILLSKWPQ-------TSTSKGIIDPA--VLSALYNDLNTVSAIQALHKLARE 374
              ++E++  L+K+ +        S  K  ++ +   +  L NDLN   A+  LH++A +
Sbjct: 287 ESVISESQETLNKFYRLLRGIDVASIEKSDVEVSRDFIETLKNDLNIPEALAILHEMATK 346

Query: 375 STKNHD------LLPIFNASAHILGI--EVCKEHLNKNISI-AIEKLVQERLILLKMKKF 425
             K ++      L   F  SA  +G+     +E     IS   I++L+  R +  + K +
Sbjct: 347 INKTNNENEKLKLTESFIKSARFIGLLESSYQEWFTAGISYQEIKRLIDLRKVAKQNKDY 406

Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +AD IR QL+  G  +      DN    T W
Sbjct: 407 DAADKIRDQLKQMGVTI-----SDNEDGTTTW 433


>gi|257466691|ref|ZP_05631002.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917843|ref|ZP_07914083.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691718|gb|EFS28553.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 473

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 195/493 (39%), Positives = 278/493 (56%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   +  F       + MYVCGPTVY++ HIGNARP IVFD + R   Y  G K
Sbjct: 2   IKIYNTLSASLDTFTPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I+RA +E  ++        +  +  Q +++D   L        +P
Sbjct: 61  -VTYVQNFTDVDDKMIKRANEEGTTV------EDVAHRYIQAYLEDMKSLHIKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
           +AT HI +MI +IQN+I  GHAYE+N ++ F  ++    YG+ S++KI++ + G R+   
Sbjct: 114 KATEHIQEMIDMIQNLIDKGHAYESNGDVYFRVATYHQEYGALSKQKIEDLQSGARIEVT 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS+ Y G  FDIHGGG DLIF
Sbjct: 174 EIKESPLDFALWKASKPGEPSWKSPWGEGRPGWHIECSAMSNKYFGDSFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+      AN W+HNG++N++G KMSKS GNF+ + ++L  K F G+  
Sbjct: 234 PHHENEIAQSKCSCG-GSFANYWMHNGYINIDGVKMSKSLGNFVLLRDIL--KHFSGK-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGI-- 346
              VIR  ML  HYR+P++F+   L++A+I L +   +                S G+  
Sbjct: 289 ---VIRFFMLSAHYRKPMNFSDAELSQAKIALERIENSLIRANEISETSIALEGSAGVEL 345

Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASA----- 389
                      + A+  D NT  AI  + +L RE      S+ N +   I   +A     
Sbjct: 346 KKALEDTKEKFIEAMDEDFNTAQAIGVIFELVRELNKTLDSSYNQEAYVIVKETADYLYH 405

Query: 390 ---HILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LGIEV  E   +N+++  +E +++ R      K ++ +D IR +L   G  ++D 
Sbjct: 406 ILYDVLGIEVEVETKVENLTVDLVEFILELRREARAEKNWALSDRIRDRLAELGIQIKD- 464

Query: 446 KNPDNGQRMTRWK 458
                G+  T W+
Sbjct: 465 -----GKDSTTWR 472


>gi|257452930|ref|ZP_05618229.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059471|ref|ZP_07923956.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685147|gb|EFS21982.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 473

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 196/493 (39%), Positives = 279/493 (56%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   +  F       + MYVCGPTVY++ HIGNARP IVFD + R   Y  G K
Sbjct: 2   IKIYNTLSASLDTFTPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I+RA +E  ++        +  +  Q +++D   L        +P
Sbjct: 61  -VTYVQNFTDVDDKMIKRANEEGTTV------EDVAHRYIQAYLEDMKSLHIKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
           +AT HI +MI +IQN+I  GHAYE+N ++ F  ++    YG+ S++KI++ + G R+   
Sbjct: 114 KATEHIQEMIDMIQNLIDKGHAYESNGDVYFRVATYHQEYGALSKQKIEDLQSGARIEVT 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS+ Y G  FDIHGGG DLIF
Sbjct: 174 EIKESPLDFALWKASKPGEPSWKSPWGEGRPGWHIECSAMSNKYFGNSFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+      AN W+HNG++N++G KMSKS GNF+ + ++L  K F G+  
Sbjct: 234 PHHENEIAQSKCSCG-GSFANYWMHNGYINIDGVKMSKSLGNFVLLRDIL--KHFSGK-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPA---- 350
              VIR  ML  HYR+P++F+   L++A+I L +           + TS  +   A    
Sbjct: 289 ---VIRFFMLSAHYRKPMNFSDAELSQAKIALERIENSLIRAHEISETSIALEGSAGVEL 345

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASA----- 389
                      + A+  D NT  AI  + +L RE      S+ N +   I   +A     
Sbjct: 346 KKALEDTKGKFIEAMDEDFNTAQAIGVIFELVRELNKTLDSSYNQEAYVIVKETADYLYH 405

Query: 390 ---HILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LGIEV  E   +N+++  +E +++ R      K ++ +D IR +L   G  ++D 
Sbjct: 406 ILYDVLGIEVEVETKVENLTVDLVEFILELRREARAEKNWALSDRIRDRLAELGIQIKD- 464

Query: 446 KNPDNGQRMTRWK 458
                G+  T W+
Sbjct: 465 -----GKDSTTWR 472


>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 485

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 186/485 (38%), Positives = 270/485 (55%), Gaps = 53/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+N+L ++   F+ I P ++RMYVCG TVYD+ H+G+AR ++VFD++ R LR+  G +
Sbjct: 25  LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHL-GYR 83

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII RA +      + + +  +T +  +   +D   L  L P H+PR
Sbjct: 84  -VTFVRNITDIDDKIIRRAAE------LGEPMGAVTERFIRAMHEDAEALGVLPPDHEPR 136

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I +I+ ++  GHAY A++ ++ F  SS P YG  S  + ++ + G RV    
Sbjct: 137 ATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDE 196

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGGLDL FP
Sbjct: 197 GKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFP 256

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+HNG + +   KM+KS GNF T+ E+L   +       
Sbjct: 257 HHENEIAQSECATG-HPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHR------- 308

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPAVL---- 352
           A  +RL +L +HYR P+++++  L +A+       + L   P+    +   DP       
Sbjct: 309 AEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEA--DPQGFRARF 366

Query: 353 -SALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASAHILGIE---- 395
            +A+ +D NT  A+  L +LARE  +               LL +      +L  +    
Sbjct: 367 HAAMDDDFNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERF 426

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +       +    I+ LV  R    K + F+ AD IR +L  +G ILED      G + T
Sbjct: 427 LRGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILED------GPQGT 480

Query: 456 RWKQK 460
            W+++
Sbjct: 481 TWRRE 485


>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 467

 Score =  332 bits (850), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 181/476 (38%), Positives = 267/476 (56%), Gaps = 56/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+ ++ + + MYVCGPTVYD+ HIGNARP++VFD L R L Y  G K
Sbjct: 2   VRLYNTLTRKQEIFEPLNDNTVTMYVCGPTVYDYFHIGNARPLVVFDTLRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I+RA QE  ++        +  +  Q++  D   L        PR
Sbjct: 61  -VKYVQNFTDIDDKMIKRANQEGITV------KELGDRFIQEYFVDAKGLNIRPADVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  MI  I+ +I  G AY  +  + FDTS  P YG  S +  +E + G RV     
Sbjct: 114 ATEHITDMIEFIKKLIDKGVAYVVDGNVYFDTSKFPQYGKLSHQDFNEIEAGARVEVNES 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK   P EP W+SPWG GRPGWH+ECS MS  YLG   DIHGGG DLIFPH
Sbjct: 174 KRNPMDFVLWKAQKPGEPAWDSPWGMGRPGWHMECSVMSMKYLGDTIDIHGGGQDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++G+KMSKS GNF T+ ++        + +  
Sbjct: 234 HENEIAQSESLTG-KPLARFWLHNGYINVDGQKMSKSLGNFFTVRDI-------SKEYDL 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTSTSKGII 347
             +R+ ML++HYR PI+F+ Q L +A+  L++                    +   +  I
Sbjct: 286 ETVRIFMLLSHYRSPINFSHQLLEQAKNALARLYNVKFRLEDIKNSSDISAVSEQERAFI 345

Query: 348 DPA------VLSALYNDLNTVSAIQALHKLARE-------------STKNHDLLPIFNAS 388
           +         + A+ +D+NT SA+  +  LA++             +++  D+L      
Sbjct: 346 NDMPRYRQKFIEAMDDDMNTASAMGVIFDLAKDVNILMADGASAEFASEASDMLKELTG- 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             ++G+ + K+     +   IE+++Q+R      + +++AD IR +L++ G +LED
Sbjct: 405 --VMGL-LYKDSACSQLDNEIEQMIQKRQQARANRDWATADRIRDELKAMGIVLED 457


>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 187/496 (37%), Positives = 272/496 (54%), Gaps = 68/496 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +KK + +YNT+ RK   F+      + MYVCG T YDF+HIG+AR  + FD+LYR L+Y 
Sbjct: 80  IKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYL 139

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             + C  YVRN TD+DDKII RA  E    PI+     ++ +   +F +D + L CL P+
Sbjct: 140 GYDVC--YVRNFTDVDDKIIARA-NEVGENPIS-----LSRRFCDEFHQDMSYLHCLPPS 191

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR ++H+PQ+I +I+ I+ +G AY  + ++ F     P+YG  S RK+++ + G RV 
Sbjct: 192 VEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVA 251

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NPADF LWK +   EP WESPWG GRPGWHIECSAMSS YLG  FDIHGGG+DL
Sbjct: 252 IDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDL 311

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEI QSC A   E     W+HNGF+ +   KMSKS GNF TI +++E       
Sbjct: 312 MFPHHENEIVQSCAA-CCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIEL------ 364

Query: 301 SWPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKW--------- 337
            +    +RL ++ THYR PI+++               Q L +++ LLS++         
Sbjct: 365 -YHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSI 423

Query: 338 PQ--------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
           PQ               S S  +  P VL+AL + L T++ +    K  +   +   L  
Sbjct: 424 PQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAA 483

Query: 384 IFNASAHIL------------GIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSA 428
           +     H+L             +   +E   K +  +   +++ ++ER +  K K++  +
Sbjct: 484 LEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKYKEYEKS 543

Query: 429 DYIRKQLESKGFILED 444
           D IRK+L + G  L D
Sbjct: 544 DAIRKELAAVGIALMD 559


>gi|160893352|ref|ZP_02074139.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
 gi|156865044|gb|EDO58475.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
          Length = 468

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 197/478 (41%), Positives = 253/478 (52%), Gaps = 54/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R   EF  I+   + +YVCGPTVYD+ HIGNARPMIVFD L R L Y   + 
Sbjct: 1   MKIFNTLTRTKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLTYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E           +I+ +   +  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANEEGVDS------KVISERFIAETKKDMAAMNVQEATTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
           AT  IP MI +I+ +I  GHAYE N  + F T S  +YG  S + ID+ + G R      
Sbjct: 113 ATEEIPDMIEMIKTLIEKGHAYEVNGTVYFRTRSFADYGKLSHKNIDDLESGHRAENHQL 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            V  +  K++P DF+LWK     EP WESPWG GRPGWH+ECS MS  Y+G + DIH GG
Sbjct: 173 KVSGQDEKEDPLDFVLWKPKKEGEPFWESPWGEGRPGWHLECSVMSKKYIGDIIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENEIAQS  A+  E  A  W+HNGFL +   KMSKS GNF T+ E+ +    
Sbjct: 233 EDLIFPHHENEIAQSEAANDKE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAD---- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQR-----------LTEAEILLSKWPQTSTSKGI 346
               +P  VIR  ML  HYR P++F+              LT  + L S  P       +
Sbjct: 288 ---KYPLQVIRFFMLSAHYRSPLNFSADLVEASKNGLERILTAVDKLKSLAPADVEGSDV 344

Query: 347 IDPAVL--------SALYNDLNTVSAIQALHKLAREST---------KNHDL-LPIFNAS 388
              A L        +A+ +DLNT  AI  + +L + +          K  DL +      
Sbjct: 345 SVEAELDGYTKRFETAMDDDLNTADAISVIFELVKYTNINISNDTPKKTVDLAIRTIEKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             ILGI    E   + +   IE L+ ER    K K F+ AD IR  L  KG ILED +
Sbjct: 405 CDILGI--ITEREEELLDSDIEALINERQEARKAKNFARADEIRNMLSDKGIILEDTR 460


>gi|187631658|sp|Q0A7N3|SYC_ALHEH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 462

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 186/485 (38%), Positives = 270/485 (55%), Gaps = 53/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+N+L ++   F+ I P ++RMYVCG TVYD+ H+G+AR ++VFD++ R LR+  G +
Sbjct: 2   LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHL-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII RA +      + + +  +T +  +   +D   L  L P H+PR
Sbjct: 61  -VTFVRNITDIDDKIIRRAAE------LGEPMGAVTERFIRAMHEDAEALGVLPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I +I+ ++  GHAY A++ ++ F  SS P YG  S  + ++ + G RV    
Sbjct: 114 ATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGGLDL FP
Sbjct: 174 GKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+HNG + +   KM+KS GNF T+ E+L   +       
Sbjct: 234 HHENEIAQSECATG-HPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHR------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPAVL---- 352
           A  +RL +L +HYR P+++++  L +A+       + L   P+    +   DP       
Sbjct: 286 AEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEA--DPQGFRARF 343

Query: 353 -SALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASAHILGIE---- 395
            +A+ +D NT  A+  L +LARE  +               LL +      +L  +    
Sbjct: 344 HAAMDDDFNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERF 403

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +       +    I+ LV  R    K + F+ AD IR +L  +G ILED      G + T
Sbjct: 404 LRGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILED------GPQGT 457

Query: 456 RWKQK 460
            W+++
Sbjct: 458 TWRRE 462


>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|61216136|sp|Q5QYP3|SYC_IDILO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 459

 Score =  331 bits (849), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 182/478 (38%), Positives = 277/478 (57%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL RK   F+ I P ++ +YVCG T YD+ HIG+AR  + FD++ R LR      
Sbjct: 3   LTVFNTLTRKKQLFEPIQPGHVGIYVCGVTTYDYCHIGHARTYVAFDIVVRYLRKL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA +        +    +T +  ++  KD   L  + P  +PR
Sbjct: 61  SVKYVRNITDLDDKIIKRAAEN------GEDFHQVTERFIREMHKDFDALNLVRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+H+ ++I +I+ +I +G+AYEA N +++FD S+  +YG  SR+ +++ + G+RV    
Sbjct: 115 VTSHMDEIILMIERLIENGNAYEAGNGDVLFDVSTFNDYGKLSRQDLEQLQAGSRVDVDA 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 175 AKQDPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLSFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA++ E     W+H+G + ++  KMSKS GNF TI  +LE        + 
Sbjct: 235 HHENEIAQSCCANQSEYV-KYWMHSGMVQVDNEKMSKSLGNFFTIRSVLE-------QYD 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTS--KGIIDPAVLS 353
           A  +R  +L +HYR  +++T + L +A   L +         PQT++   +     +   
Sbjct: 287 AETVRYFLLSSHYRSQLNYTQENLDQAHSALERLYTALRDITPQTASEELRSKYWQSFQQ 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--------AHILGI--EVCKEHL-- 401
           A+ +DLN   A+  L ++ARE  +N +  P   A         A ++G+  +  +E L  
Sbjct: 347 AMDDDLNAPEAMSVLFEIAREINRNRESAPDTAAQLAHVLLELAEVMGLLQQSPEEFLQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + +    IE L+ +R    + K +++AD  R +L + G +LED      G   TRW++
Sbjct: 407 DDDDVAKIEALIAKRNQAREDKDWAAADEARDELTNMGIVLED------GAEGTRWRR 458


>gi|254523152|ref|ZP_05135207.1| cysteinyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720743|gb|EED39268.1| cysteinyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 458

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 187/479 (39%), Positives = 263/479 (54%), Gaps = 48/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N L R++  F  +DP+   +YVCGPTVY++ HIGNAR  +VF VL  LLR  +G  
Sbjct: 3   LRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y RNITD+DDKI   AR++   +PI    S IT K    + +D   L  + P  +P 
Sbjct: 61  ALRYARNITDVDDKINTAAREQ--GVPI----STITDKFAAAYREDMAALGVVPPDIEPE 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+PQ+I +I+ +I  GHAY A   ++F  +S   YG  SRR  DE   G RV    +
Sbjct: 115 VTAHMPQIITMIEQLIASGHAYAAEGHVLFAVASFDGYGKLSRRDPDEMLAGARVDVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FPH
Sbjct: 175 KRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   +  A  W+HNG LN  G KMSKS GN   +++L+       R  P 
Sbjct: 235 HENEIAQSECAHGGKIFARFWLHNGMLNFGGAKMSKSLGNIERVHDLV-------RQHPP 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSA-LYND 358
             +RLA+L  HYR+P+D++   + ++   L +   T     S     + PA + A L +D
Sbjct: 288 EALRLALLSAHYRQPLDWSDGLIEQSVRTLDRLYGTLRELASIEASAVIPATVEATLDDD 347

Query: 359 LNTVSAIQALH----------------KLARESTKNHDLLPIFNAS-AHILGIEVCKEHL 401
           LNT  A+  +                 +L  E       L +  A  A   G     +  
Sbjct: 348 LNTPQALAEVARIAADARRATDPAEQARLKGELLGAGLALGLLQADPAQWFGTAAGDDGD 407

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +      I+ L+ ER    + + F+ +D IR QL ++G +LED        +  RW +K
Sbjct: 408 DAR----IQGLIDERAAAKQARDFARSDAIRDQLAAEGIVLEDTP------QGVRWSRK 456


>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|187629818|sp|A3N0S3|SYC_ACTP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
          Length = 459

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 185/468 (39%), Positives = 267/468 (57%), Gaps = 42/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  +
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFKA 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCKEH 400
           A+ +D NT  A+  L ++ARE          K + L       A +LG+     E   + 
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              N  +A IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 187/496 (37%), Positives = 272/496 (54%), Gaps = 68/496 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +KK + +YNT+ RK   F+      + MYVCG T YDF+HIG+AR  + FD+LYR L+Y 
Sbjct: 80  IKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYL 139

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             + C  YVRN TD+DDKII RA  E    PI+     ++ +   +F +D + L CL P+
Sbjct: 140 GYDVC--YVRNFTDVDDKIIARA-NEVGENPIS-----LSRRFCDEFHQDMSYLHCLPPS 191

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR ++H+PQ+I +I+ I+ +G AY  + ++ F     P+YG  S RK+++ + G RV 
Sbjct: 192 VEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVA 251

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NPADF LWK +   EP WESPWG GRPGWHIECSAMSS YLG  FDIHGGG+DL
Sbjct: 252 IDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDL 311

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEI QSC A   E     W+HNGF+ +   KMSKS GNF TI +++E       
Sbjct: 312 MFPHHENEIVQSCAA-CCESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIEL------ 364

Query: 301 SWPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKW--------- 337
            +    +RL ++ THYR PI+++               Q L +++ LLS++         
Sbjct: 365 -YHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSI 423

Query: 338 PQ--------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
           PQ               S S  +  P VL+AL + L T++ +    K  +   +   L  
Sbjct: 424 PQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAA 483

Query: 384 IFNASAHIL------------GIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSA 428
           +     H+L             +   +E   K +  +   +++ ++ER +  K K++  +
Sbjct: 484 LEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKNKEYEKS 543

Query: 429 DYIRKQLESKGFILED 444
           D IRK+L + G  L D
Sbjct: 544 DAIRKELAAVGIALMD 559


>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 459

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 185/467 (39%), Positives = 261/467 (55%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ I MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 60  NVRYVRNITDVDDKIIKRALEN------KETCDQLVDRMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLSA 354
           A  +R   L  HYR  +D++V+ L  A   L +         +            A  +A
Sbjct: 286 AESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTALRGCDVSGAAEGGEHYVEAFKTA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPESFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            N + +  IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 406 TNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|229558613|sp|B0BPJ8|SYC_ACTPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 459

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 185/468 (39%), Positives = 267/468 (57%), Gaps = 42/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  +
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFKA 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCKEH 400
           A+ +D NT  A+  L ++ARE          K + L       A +LG+     E   + 
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              N  +A IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 459

 Score =  331 bits (848), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 185/468 (39%), Positives = 267/468 (57%), Gaps = 42/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  +
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFKA 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCKEH 400
           A+ +D NT  A+  L ++ARE          K + L       A +LG+     E   + 
Sbjct: 345 AMDDDFNTPGALAVLFEVAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              N  +A IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|297545336|ref|YP_003677638.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843111|gb|ADH61627.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 466

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 200/491 (40%), Positives = 266/491 (54%), Gaps = 62/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EFQ ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y  G K
Sbjct: 1   MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKELAEKYIHEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  ++  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIVKFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWGRGRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQS-EALYGQQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQ-------------TSTSKGII 347
            V+RL MLM HYR PI+F++  + +A    E LL+                     K I+
Sbjct: 285 EVLRLFMLMAHYRNPINFSLDLMDQANSAYERLLNAMANLKHLLTVCKERELNEEEKRIV 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ +  N            +L +F   + I
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTANINLSGNSSKELVKYILDMFLKLSEI 404

Query: 392 LGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           LG+    V  +  ++ I   IEK  Q R    K K +  AD IR +L  KG ILED   P
Sbjct: 405 LGLFYRTVKTDIDDEEILALIEKRQQAR----KEKNWKLADEIRDRLREKGIILED--TP 458

Query: 449 DNGQRMTRWKQ 459
           +      RWK+
Sbjct: 459 EG----VRWKR 465


>gi|160933144|ref|ZP_02080533.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
 gi|156868218|gb|EDO61590.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
          Length = 470

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 188/475 (39%), Positives = 268/475 (56%), Gaps = 51/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I P   ++Y CGPTVY+F HIGNARPM VFD+L R L Y  G K
Sbjct: 1   MKIFNTLTRQKEEFVPIAPGEAKIYACGPTVYNFIHIGNARPMCVFDILRRYLEYR-GMK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII +A +E       D +++   +  Q++  D   L     T  PR
Sbjct: 60  -VTFVQNFTDIDDKIIRKANEEK-----TDYLTV-AERYIQEYKTDARGLNIREATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + Q+I +I +++  G+AY A N ++ F T     YG  S + ++E + G R+    
Sbjct: 113 ATETMEQIIEIISDLVKKGYAYPAENGDVYFRTLKFSGYGKLSHQPLEELEAGARIGVGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DLIFP
Sbjct: 173 SKEDPMDFALWKAAKPGEPYWDSPWGKGRPGWHIECSAMARTYLGDTIDIHCGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS C + +   A+ W+HNG++N++ RKMSKS  NF T+ E+   K+FG     
Sbjct: 233 HHENEIAQSECCNGV-PFAHYWMHNGYINVDNRKMSKSLNNFFTVREV--AKEFGYEP-- 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------ 350
              IR  M+ +HYR PI+++V  L +    L + +      + ++  A            
Sbjct: 288 ---IRYLMVASHYRSPINYSVDLLKQCTAALERLYTCRENLEFVVSNAKPGREARDEEIK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
                       A+ +DLNT  AI  L +LA++   N             + L +FN+ A
Sbjct: 345 KRLEEYQNRFCEAMDDDLNTADAIAVLFELAKDINTNLSTATNPHKEIAEEALTLFNSLA 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LG+   K+    ++   IE L+Q R+   K K ++ AD IR +L ++  +LED
Sbjct: 405 DVLGLLYVKKDTKDSLDEEIENLIQRRVEARKNKNWAEADRIRDELSARHVVLED 459


>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 462

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 187/464 (40%), Positives = 266/464 (57%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R    F  I+P  +RMYVCG T+YD+ HIG+AR M+ FDV+YR L+    E 
Sbjct: 4   LQIYNSLTRSKQVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKALGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        ++IS +T++ TQ   +DT+ L  L P H+PR
Sbjct: 63  -VTYVRNITDIDDKIINRAGEN------GESISSLTARFTQYMHEDTSALGILPPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P+M+ LI  +  +G AY++ + ++ +       YG  S + +D+ + G RV    
Sbjct: 116 ATEYVPEMLELIAKLEKNGLAYQSEDGDVNYSVRDFRGYGKLSGKSLDDLRAGERVDVNT 175

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W S WG GRPGWHIECSAMSS  LG  FDIHGGG DL
Sbjct: 176 GKRDPLDFVLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++L       +
Sbjct: 236 QFPHHENEIAQSEGASG-HPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVL-------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
           ++ A V+R  ++ +HYR P++++   L +A   L++         + D  V         
Sbjct: 288 NYDAEVLRFFIIRSHYRSPLNYSDAHLDDARSALTRLYTALKDIDVQDKPVDWQEEHAVR 347

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGI--EVCKEHLNKNIS 406
              A+ +D NT  A+  L +LA E  + H  ++     A   +LG+     ++ L  N +
Sbjct: 348 FSRAMNDDFNTPEAVAVLFELANEVNRTHSVEVASQLKALGSVLGLLERDPRQFLQGNGT 407

Query: 407 IA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +       IE  +Q R    K + F+ AD IR +L  KG +LED
Sbjct: 408 VDENEEKWIEAQIQARREAKKTRDFAKADKIRNELLEKGIVLED 451


>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 465

 Score =  330 bits (847), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 181/468 (38%), Positives = 260/468 (55%), Gaps = 46/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  I P   R+Y CGPTVY++ H+GNARPM+VFD+L R L Y  G K
Sbjct: 3   MKIYNTLTREKDEFVPIKPGEARIYACGPTVYNYIHVGNARPMVVFDILRRYLEYR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TD+DDK+I RA +E        A++ +  K    + +D   L     T  PR
Sbjct: 62  -VLFAQNFTDVDDKMIRRANEE------GVAVAEVAEKYIAAYREDAAGLHVREATFHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  ++ LI+ +   G+AY ++ ++ F   +   YG  S + +++ + G RV     
Sbjct: 115 ATENIADILALIRTLEQKGYAYASDGDVYFRAHAFKEYGKLSHQPLEDLEAGARVDVSER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+ H+LG+  DIH GG DLIFPH
Sbjct: 175 KEDPVDFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMARHFLGQTIDIHCGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA+     A+ W+HNG++N++ RKMSKS GNF T+ E+    K+G      
Sbjct: 235 HENEIAQSECANDA-PFAHYWMHNGYINIDNRKMSKSLGNFFTVREV--AAKYGYEP--- 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTSTSKGII 347
             IR  ML   YR PI+F+ + + ++   L +                  P  S +    
Sbjct: 289 --IRFLMLSAQYRTPINFSDEIMEQSVAALDRLYRCREALKDALRQAGETPADSAAVSAW 346

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLP----IFNASAHILGIEV 396
                +A+ +DLNT  A+  L +L +       E T   D L     +F     +LG+  
Sbjct: 347 QEKFDAAMDDDLNTADALAVLFELVKEINTRVAEGTAGADWLKGAAGLFGTFCDVLGL-- 404

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E   + +   +E L+++R    K K F +AD IR +L +KG +L+D
Sbjct: 405 LYERKERTLDAEVEVLIEKRRQARKAKDFKTADAIRDELSAKGIVLKD 452


>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
 gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
          Length = 474

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 183/479 (38%), Positives = 267/479 (55%), Gaps = 57/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F  ++P N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +    
Sbjct: 4   LTVYNTLTRQKEPFIPLNPQNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQH--GY 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I  +T++      +D+  L    P  +P+
Sbjct: 62  PLTYVRNITDIDDKIIARANEN------GETIQQLTARFIAAMNEDSDALGVQRPDVEPK 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI QMI +I+ +I +G AY A N ++ +     P YG  S + +D+ + G RV    
Sbjct: 116 ATEHIAQMIAMIEQLIANGKAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEVDG 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECSAM     G  FDIHGGG DL FP
Sbjct: 176 FKRDPLDFVLWKAAKPEEPHWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADLQFP 235

Query: 244 HHENEIAQSCCADR--------------IEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENEIAQSC A                I+     W+HNGF+ ++  KMSKS GNF TI 
Sbjct: 236 HHENEIAQSCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIR 295

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           ++L       + + A V+R  +L  HYR P++++   L +A+  L+       + G + P
Sbjct: 296 DVL-------KKYDAEVVRFFILRAHYRSPLNYSDAHLDDAKHSLTS---LYNALGNVAP 345

Query: 350 A--------------VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILG 393
           A                +A+ +D +TV A+  L +LA+E   T++ +L     A A +LG
Sbjct: 346 APFTLSEHANDYTRRFYAAMDDDFDTVKAVAVLFELAKEVNKTQSAELSGCLKALAGVLG 405

Query: 394 IEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   + H         N   + AIE L+ +R +    K ++ +D IR +L ++G +L D
Sbjct: 406 LLQREPHEFLQSGAPDNGLSADAIEALIAQRNLARANKNWAESDRIRDELAAQGVVLRD 464


>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 459

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 182/468 (38%), Positives = 265/468 (56%), Gaps = 42/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  + P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNIIRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  +
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFKA 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT  A+  L ++ARE          K + L       A +LG+         + 
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             N +    IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 405 DANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|15602810|ref|NP_245882.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431884|sp|P57890|SYC_PASMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|12721267|gb|AAK03029.1| CysS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 459

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 195/480 (40%), Positives = 269/480 (56%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  H+G+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +       N+  + +  K   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------NETCNQLVEKMIAEMHKDFDALNVLRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +I+ +I   HAY  AN +++FD  S   YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL FP
Sbjct: 174 VKKNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSCCAHS-GRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGI-IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +         P    ++G     A   A
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLNLAHSALERLYTALRGTDPTAVATEGQNYLAAFREA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI-----EVCKEHL 401
           + +D NT  AI  L ++ARE    KN D+L            A ILG+     E   +  
Sbjct: 346 MDDDFNTPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           + N  +A IE L+++R      K ++SAD  R +L   G +LED  N       T W+++
Sbjct: 406 SDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVNG------TTWRKQ 459


>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
 gi|254781683|sp|C1D7F5|SYC_LARHH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
          Length = 457

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 188/477 (39%), Positives = 265/477 (55%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   FQ I P  + MYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I+++T +      +D   L    P  +PR
Sbjct: 61  -LTYVRNITDIDDKIIRRAAEN------GEPINVLTQRFIDAMDEDAAALGVQKPNFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +P MI +I+ +I  G AY A N ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATQFVPDMISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVDP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W SPWG+GRPGWHIECSAM+ HY G  FDIHGGG DL FP
Sbjct: 174 NKRDPMDFVLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A    K  N W+HNGF+ ++  KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEGAHDC-KFVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----------L 352
           A V+R  +L  HYR P++++   L +A   LS+      +    D A+            
Sbjct: 286 AEVVRFFILRAHYRSPLNYSDAHLEDARSALSRLYTALKNVPAADVALDWEANDYARRFR 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIE-------VCKEHLNK 403
           +A+ +D NTV A+  L +LA E+ K+   +L         +LG+        +    L  
Sbjct: 346 AAMDDDFNTVEAVAVLFELAGEANKSRSAELAGWLKTLGGVLGLLQRDPVDFLQGGSLEG 405

Query: 404 NISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IS   +E+L+  R      K ++ +D IR +L ++G +LED      G   T W++
Sbjct: 406 EISADEVEQLIAARKAARAGKDWAESDRIRDELIARGIVLED------GAGGTTWRR 456


>gi|329890424|ref|ZP_08268767.1| cysteinyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845725|gb|EGF95289.1| cysteinyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 468

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 185/484 (38%), Positives = 268/484 (55%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I++TL R+   F+  DP+ + +YVCGPTVYD+AHIGNARP +VFDVL RLLR  YG  
Sbjct: 3   LHIHDTLRREKRLFEPRDPNRVSLYVCGPTVYDYAHIGNARPPVVFDVLVRLLRRTYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI  +A +E        AI  IT++    ++ D   L    P   P 
Sbjct: 63  KVVYARNVTDVDDKINAKAAKE------GVAIGEITARYEAAYLADMGLLNVSPPDIAPH 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I  +   IQ II  G AY A   ++FD SS P+YG+ S R +D+   G RV    +
Sbjct: 117 VTDYIEAITRQIQAIIDAGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM    LG   DIHGGG+DL+FPH
Sbjct: 177 KKNPHDFVLWKPSKADEPSWPSPWGEGRPGWHIECSAMIEETLGLPIDIHGGGIDLVFPH 236

Query: 245 HENEIAQSCCA-------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           HENEIAQ  CA       +  ++ A  W+HNGFL ++  KMSKS GN + +++L++    
Sbjct: 237 HENEIAQGVCAHGHAHGEEAHDEYARYWMHNGFLTVDAEKMSKSIGNVLLLHDLVQ---- 292

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGI----IDPAV- 351
              + P  V+R A+L  HYR+P+D+    L ++   L + +     + G+    ++P V 
Sbjct: 293 ---AMPGEVVRWALLSAHYRQPLDWNQTLLEQSRKNLDRLYGALHRAAGVEAAEVEPPVE 349

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK--- 398
            + ++ +DLNT  A+ AL  L+ +  +           +      A+A ILG+       
Sbjct: 350 FMKSIEDDLNTPGAMAALFALSSDIERGMTAGDEGAVAEAKGRLIAAASILGVLQADPAE 409

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               +++ +   +E L+++R      K ++ AD IR +L     ++ D      G +   
Sbjct: 410 WFSGVDEGLKAEVEGLLEQRAAARTAKNWAEADRIRDRLNELNVVVMD------GPQGAT 463

Query: 457 WKQK 460
           W+ K
Sbjct: 464 WRMK 467


>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 459

 Score =  330 bits (846), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 184/468 (39%), Positives = 267/468 (57%), Gaps = 42/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  + P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNIIRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  +
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFKA 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCKEH 400
           A+ +D NT  A+  L ++ARE          K + L       A +LG+     E   + 
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              N  +A IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 459

 Score =  330 bits (845), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 182/468 (38%), Positives = 265/468 (56%), Gaps = 42/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  + P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNIIRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  +
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFKA 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT  A+  L ++ARE          K + L       A +LG+         + 
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEGMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             N +    IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 405 DANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 459

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 187/464 (40%), Positives = 265/464 (57%), Gaps = 42/464 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ I+P  + MYVCG TVYD  HIG+AR +  FDV+YR L+    + 
Sbjct: 4   LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYD- 62

Query: 65  CVTYVRNITDIDDKIIERA--RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V YVRNITDI+DKII+RA  R   P   + + I+           +D   L  L PTH+
Sbjct: 63  -VNYVRNITDIEDKIIKRALERGITPEQLVEETIA--------DMRQDAAALGLLPPTHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+H+  M+ +I+ +I +G AY  AN ++ +       YG  S R +D+ + G RV  
Sbjct: 114 PRATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS H+LG+ FDIHGGG DL 
Sbjct: 174 DPNKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQ 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A    +  N W+HNGF+N++G KMSKS GNF TI ++L+   F G  
Sbjct: 234 FPHHENEIAQSEGA-HGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQ--HFDGE- 289

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGI-----IDPA 350
               VIR  ++ +HYR P+++T   L +A+  L++        +  TS GI         
Sbjct: 290 ----VIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAAR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
             +A+ +D  T  A+  L +LA E  K+ D  L  +      +LG+      +     + 
Sbjct: 346 FKAAMDDDFGTSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGVG 405

Query: 409 --------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   +E L+Q R      K ++ +D IR +L +KG +LED
Sbjct: 406 EGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLED 449


>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|61216143|sp|Q5X5P9|SYC_LEGPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 456

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 197/474 (41%), Positives = 266/474 (56%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   SI        +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASERGVSI------DELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G+AY ++N ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGNAYVSDNGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L+          
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHH------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSK--GIIDPAVLS 353
             VIR  +L +HYR P++++ + L  A+  L +         PQT+ SK           
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFNQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEHLNKNI 405
           A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +  
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEE 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 406 KLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELED------GATGTTWRR 453


>gi|61216275|sp|Q7NX82|SYC_CHRVO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 457

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 187/464 (40%), Positives = 265/464 (57%), Gaps = 42/464 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ I+P  + MYVCG TVYD  HIG+AR +  FDV+YR L+    + 
Sbjct: 2   LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERA--RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V YVRNITDI+DKII+RA  R   P   + + I+           +D   L  L PTH+
Sbjct: 61  -VNYVRNITDIEDKIIKRALERGITPEQLVEETIA--------DMRQDAAALGLLPPTHE 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+H+  M+ +I+ +I +G AY  AN ++ +       YG  S R +D+ + G RV  
Sbjct: 112 PRATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEV 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS H+LG+ FDIHGGG DL 
Sbjct: 172 DPNKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQ 231

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A    +  N W+HNGF+N++G KMSKS GNF TI ++L+   F G  
Sbjct: 232 FPHHENEIAQSEGA-HGHQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVLQ--HFDGE- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGI-----IDPA 350
               VIR  ++ +HYR P+++T   L +A+  L++        +  TS GI         
Sbjct: 288 ----VIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAAR 343

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
             +A+ +D  T  A+  L +LA E  K+ D  L  +      +LG+      +     + 
Sbjct: 344 FKAAMDDDFGTSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGVG 403

Query: 409 --------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   +E L+Q R      K ++ +D IR +L +KG +LED
Sbjct: 404 EGELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLED 447


>gi|312876620|ref|ZP_07736601.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796573|gb|EFR12921.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 465

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 184/470 (39%), Positives = 262/470 (55%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +   EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E  ++        +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKEGITV------FELARRFIEEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSKGIIDPA 350
             +RL ML  HYR+P++F++  + +AE+              L+     +S S   +  A
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSESDDKLKAA 344

Query: 351 V-------LSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASAHILGI-EV 396
           +       + A+ +DLNT  A   L ++ RE      S     L    +    + GI  +
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANSCSKEALTFAKDTLKELCGILGI 404

Query: 397 CKEHLNKNISIAIE--KLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +++  K  +I  E  +LV++R    K+K F+ AD IR +L+S G+I+ D
Sbjct: 405 LEQYGAKEEAIPQEILELVEKRNQARKVKNFAEADRIRDELKSLGYIVLD 454


>gi|54294205|ref|YP_126620.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
 gi|61216142|sp|Q5WX29|SYC_LEGPL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
 gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
          Length = 456

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 197/474 (41%), Positives = 264/474 (55%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   SI        +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASERDVSI------DELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G+AY   N ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L+          
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHH------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSK--GIIDPAVLS 353
             VIR  +L +HYR P++++ + L  A+  L +         PQT+ SK           
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFNQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEHLNKNI 405
           A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +  
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEE 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 406 KLVIEQLIAERLKARAERNWTKADQIRADLLSKGIELED------GATGTTWRR 453


>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
 gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
          Length = 463

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 186/468 (39%), Positives = 269/468 (57%), Gaps = 44/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+N+L ++   F  I+P  +R+YVCG TVYD+ H+G+AR MIVFDV+ R LR    E 
Sbjct: 2   LTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I+ +T +  Q   +DT  L  + P  +PR
Sbjct: 61  -VTYVRNITDIDDKIIQRANEN------GEDINQLTDRFIQAMYEDTDALNVIRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP+++ +IQ+++   +AY  +N ++ +      NYG  S + +D+ + G RV    
Sbjct: 114 ATQSIPEIVAMIQSLLDKNYAYLTDNGDVCYAIQRFENYGQLSGKHLDDLRAGERVEVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECSAMS+H LG  FDIHGGG+DL FP
Sbjct: 174 SKQHPLDFVLWKTAKPGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N+W+HNGF+ +   KMSKS  NF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEGATG-ETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLE-------RYQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTS--TSKGIIDPAVLSA 354
             V+R  +L +HYR  ++++ Q L  A+       I +   P T         +   L+A
Sbjct: 286 PEVVRYFILTSHYRSELNYSEQELEAAKQSITRLYIAIRDLPNTDEPCPDDSYNQRFLTA 345

Query: 355 LYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILG------------IEVC 397
           + +D NT  A+ AL  L++E       K  + +P+ +    +              ++  
Sbjct: 346 MNDDFNTPEALAALFSLSKEINILRRKKVSEAIPLASELRRLGNLLGLLQAKPETFLQGT 405

Query: 398 KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +     +S+  IE+L+ ER+   K + F++AD IR  L +KG ILED
Sbjct: 406 SQEKEPGLSVTEIEQLIVERIDARKNRDFATADQIRADLTAKGIILED 453


>gi|218508011|ref|ZP_03505889.1| cysteinyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 245

 Score =  330 bits (845), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 151/240 (62%), Positives = 187/240 (77%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YNTL R+ + F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 6   ELKLYNTLTREKSVFAPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P  +P
Sbjct: 66  NHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNVEP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G RV    
Sbjct: 126 RATDNIEEMIEIIEKLISNGHAYAASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAVDA 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLIFP
Sbjct: 186 HKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIFP 245


>gi|317472691|ref|ZP_07932006.1| cysteinyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899868|gb|EFV21867.1| cysteinyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 466

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 261/475 (54%), Gaps = 54/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  + P  + MYVCGPTVY++ HIGNARPMI+FD + R   Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S       + I  +  ++  KD   L     THQP+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVSA------TEIAERYIEECKKDMEGLNVKPATHQPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  GHAYE N  + F T S   YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIDGMIRMIGTLIEKGHAYEVNGTVYFKTRSFDGYGKLSKKNIDDLEAGHRDIKVRG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     E  W SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKQDPLDFVLWKPKKEGEIAWPSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQS  C D  E  AN W+HNGFLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 FPHHENEIAQSEACND--ECFANYWMHNGFLNIDNQKMSKSAGNFFTVREISE------- 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFT----------VQR-LTEAEILLSKWPQTSTSKGIIDP 349
            +P  VIR  ML  HYR P++F+          + R LT  +++  +  +  T+ G  + 
Sbjct: 284 KYPLQVIRFFMLSAHYRNPLNFSDTLVESAKNGLDRILTAIDLVRDQADKPETAAGKEEE 343

Query: 350 AVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNH--DLLPIFNASA 389
           A L            A+ +D NT  A+ A+ +L        +ES+ ++   LL       
Sbjct: 344 ANLEEARKLVGKFEEAMEDDFNTADAVSAIFELVKLANTTVKESSSDYAAKLLETMETLC 403

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGIE  +E    +  I      +++    K K F+ AD IR +L  KG IL+D
Sbjct: 404 GVLGIETKQEEDILDEEIERMIEERQQ--ARKEKDFARADEIRDELLEKGIILKD 456


>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 467

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 190/479 (39%), Positives = 267/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F+ I  + + MYVCG TVYD  H+G+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +   S         +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALKNRESC------DQLVDRMVAEMYKDFDMLNVLRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY  +N +++F+  S   YG  SR+ +++ + G RV   +
Sbjct: 114 ATHHIAEIITLVEKLIQRGHAYVSSNGDVMFNVESFKEYGKLSRQNLEQLQAGARVEIVH 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKPEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF T+ ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGNQYVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLNI-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIID-------PAVLSA 354
           A  +R  +L  HYR P++++ + L  A   L +       T K  I         A   A
Sbjct: 286 AESVRYFLLNAHYRSPLNYSEENLNLAHTALERLYTALRGTDKSAIACGGENYINAFKEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE    KN D      L       A ILG+      E  +  
Sbjct: 346 MNDDFNTPNAVSVLFEIAREVNKLKNEDMEKANSLAARLRELADILGLLYQDPEEFLQSG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           L+      IE L+++R      K +++AD  R+QL     +LED      G   T W++
Sbjct: 406 LDDEEVKLIESLIKQRNEARAAKDWATADAAREQLSKMKVVLED------GANGTTWRK 458


>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511834|sp|C6E7P0|SYC_GEOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
          Length = 480

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 200/500 (40%), Positives = 268/500 (53%), Gaps = 66/500 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     EF  I+P  + MYVCG TVYD  HIG+AR  +VFD++YR L     E 
Sbjct: 3   LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TDIDDKII RA ++   +  N+    I+ +  ++F  D  RL    PT QP+
Sbjct: 62  -VTYVRNYTDIDDKIINRANRD--GVAYNE----ISERFIKEFDNDMARLMLQLPTFQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I L+Q +I  G AY++ +++ +       Y   S+R +++ + G R+     
Sbjct: 115 ATEHIPEIINLVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+  DIHGGG DLIFPH
Sbjct: 175 KEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+LE       S+ A
Sbjct: 235 HENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILE-------SYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPA-------- 350
            V+R  +L  HYR PIDF+ Q L EAE+ L +  +         + G   PA        
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALAGIDERLASGAHTPADADNTEFA 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHIL 392
                       A+ +D NT  A+  L  L R       T +  LL    A     A +L
Sbjct: 347 EKVAGFAGRFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEKVKAEVAKMAAVL 406

Query: 393 GI---------EVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           GI         +  K+    ++ ++   IE L+ ER    K K F   D IR  L  K  
Sbjct: 407 GICDSVPAAFLQRMKDRKTSDMEMSAEEIETLIAERAEARKAKNFKRGDEIRDLLLEKNI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
           +L D        + T WK K
Sbjct: 467 VLLD------SAQGTTWKVK 480


>gi|167036780|ref|YP_001664358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039500|ref|YP_001662485.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256752501|ref|ZP_05493358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300915250|ref|ZP_07132565.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725174|ref|YP_003904925.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115202|ref|YP_004185361.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|229558799|sp|B0KCH9|SYC_THEP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558800|sp|B0K5F6|SYC_THEPX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166853740|gb|ABY92149.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166855614|gb|ABY94022.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256748636|gb|EEU61683.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300888974|gb|EFK84121.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582235|gb|ADN55634.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928293|gb|ADV78978.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 466

 Score =  329 bits (844), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 195/490 (39%), Positives = 265/490 (54%), Gaps = 60/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF+ ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y  G K
Sbjct: 1   MKLYNTLSRTKEEFEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K  +++  D   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIEEYFIDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSEAA-YGQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPAVLS------- 353
            V+RL MLM HYR PI+F++  + +A    E LL+          +     L+       
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQAKSAYERLLNAVANLKHLLTVCKDRELNEEEKRIK 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                       A+ +D NT  AI  L ++++ +  N            +L IF   + I
Sbjct: 345 EKFEEYKKEFEDAMDDDFNTADAISVLFEMSKTANTNISGNSSKKLVEYILDIFLKLSEI 404

Query: 392 LGIEV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           LG+     +  LN    +A   L++ER    K K +  AD IR +L  KG ILED   P+
Sbjct: 405 LGLSYRGVETELNDEEILA---LIEERQKARKEKNWKLADEIRDRLREKGIILED--TPE 459

Query: 450 NGQRMTRWKQ 459
                 RWK+
Sbjct: 460 G----VRWKR 465


>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|61216153|sp|Q5ZVY1|SYC_LEGPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 456

 Score =  329 bits (844), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 198/476 (41%), Positives = 265/476 (55%), Gaps = 45/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLKPGTIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   SI        +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASERGVSI------DELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G+AY   N ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L+          
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHH------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDP----AV 351
             VIR  +L +HYR P++++ + L  A+  L +         PQT  SK  +D       
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTEDSK--LDEYWQVQF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEHLNK 403
             A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +
Sbjct: 344 NQAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAE 403

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 404 EEKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELED------GATGTTWRR 453


>gi|254469086|ref|ZP_05082492.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087896|gb|EDZ65179.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 453

 Score =  329 bits (844), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 192/466 (41%), Positives = 269/466 (57%), Gaps = 50/466 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           IKI+NT   K  +F+ I  ++++MYVCG TVYD  H+G+AR +IVFD++YR  L   Y  
Sbjct: 2   IKIFNTFTSKKEKFKPITENHVKMYVCGMTVYDDCHVGHARVLIVFDLIYRWFLNSGYD- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITDIDDKII ++  +      N+    +T +      +D+  L+ + PT QP
Sbjct: 61  --VQYVRNITDIDDKIINKSNDQ--DCKFNE----LTDRYIDSMHEDSKALSVIPPTFQP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT  IP MI +I  ++  G AY   N ++ F+ +   +YG  S++ +D+   G+RV   
Sbjct: 113 KATEAIPSMIKMISILVDKGFAYIGKNGDVFFEIAKFKDYGKLSKKNVDDLDAGSRVKID 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK+  DF+LWK S   EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DLIF
Sbjct: 173 DNKKSFGDFVLWKLSKENEPSWQSPWGNGRPGWHIECSAMSSDILGESFDIHGGGQDLIF 232

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQS  C     K AN WIHNGF+N++  KMSKS GNF T+  +L  KK+ G  
Sbjct: 233 PHHENEIAQSESCHGH--KMANYWIHNGFVNVDDEKMSKSLGNFFTLKNVL--KKYSGE- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKG 345
               V+R  +  +HYR P++++ Q L +A++ + K                W + S SK 
Sbjct: 288 ----VVRFFVYKSHYRSPLNYSDQNLNDAKVAVEKIYIALRPYKCIQVDLDWSKASLSK- 342

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVC--KEHL 401
                +  AL +D N+  AI  + KL  +  K  N+DL     +    LG+     +E  
Sbjct: 343 -----IKDALDDDFNSPKAISIIFKLINQLNKGSNNDLANEIYSVLKALGLMAIPQEEFF 397

Query: 402 NKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            K+  I    IEKL+Q+R      K +  AD +R +++S G +LED
Sbjct: 398 TKSSKIDHDHIEKLIQQRAQAKLQKDYQKADELRNEIDSLGVVLED 443


>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082066|sp|B0UVH6|SYC_HAES2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 459

 Score =  329 bits (844), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 192/474 (40%), Positives = 265/474 (55%), Gaps = 40/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIRRALEN------KETCEQLVDRMVVEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY A+N +++FD  S   YG  SR+ + + + G RV    
Sbjct: 114 ATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIID-------PAVLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +       T K  +             A
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLDLAHGALERLYTALRGTDKSAVSFGGENFIAQFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI-----EVCKEHL 401
           + +D NT +AI  L ++ARE    KN D      L       A ILG+     E   +  
Sbjct: 346 MNDDFNTPNAISVLFEMAREINRLKNEDKLLADGLAARLRELASILGLLDQDPEDFLQAG 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           + +  IA IE+L+++R    + K ++ AD  R +L + G ILED  N    ++M
Sbjct: 406 SDDAEIAKIEELIKQRNDARQAKDWARADAARNELTTMGVILEDSSNGTMWRKM 459


>gi|218961048|ref|YP_001740823.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729705|emb|CAO80617.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 469

 Score =  329 bits (844), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 187/471 (39%), Positives = 265/471 (56%), Gaps = 50/471 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT  RK  EFQ I P  + +Y CGPTVY++ HIGNAR  I FDV+ R   Y   E  V
Sbjct: 3   LYNTQTRKKEEFQPITPGKVGIYACGPTVYNYFHIGNARAFIFFDVVRRYFTYRGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYV+NITDIDDKII +A +E      N + +++  K T+ F+ DT+ L    PT+QP+AT
Sbjct: 61  TYVQNITDIDDKIIAQANEE------NISFTLVAEKYTRAFLDDTSALGIKPPTYQPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +  +I  I  +   G+AYE   ++ F T ++P+YG  S +K +EQ  G RV E Y+K+
Sbjct: 115 EVMDDIIAFIAELEKKGYAYEVEGDVYFATENLPSYGCLSGKKTEEQLAGARVMENYNKR 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +PADF LWK+  P EP WESPWG+GRPGWH EC  MS  YLG+ FDIH GG+DLIFPHHE
Sbjct: 175 HPADFTLWKKGKPGEPVWESPWGKGRPGWHTECVVMSQKYLGETFDIHCGGIDLIFPHHE 234

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NE+AQ+  A   +  AN W+HNGFLN++G KMSKS  NF T  ++L         + A  
Sbjct: 235 NELAQA-MAYSGKPLANYWMHNGFLNVDGEKMSKSLKNFFTARDILA-------EYDAES 286

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSK-----GI------ 346
           IR   L  HYR PIDF+ + + E++  ++          +P+ + ++     G       
Sbjct: 287 IRFFFLSKHYRSPIDFSRELMEESQRAVANLYSSLAEINYPENAENRRPTVCGTAQELQN 346

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHL 401
           ++   + A+ +D NT  AI  L +L R+  KN         SA I  +E+       ++L
Sbjct: 347 LEQEFILAMDDDFNTAKAISLLFELNRK-VKNTSATMADRISAAIKMVELGSVLGFFQNL 405

Query: 402 NKNISIAIEKLVQERLILL--------KMKKFSSADYIRKQLESKGFILED 444
              +   +  L ++ + L+          K ++ AD IR  L   G  ++D
Sbjct: 406 EAKLKQKMPDLSKDLICLILSYRKEARDKKDWALADKIRNDLAQLGIEIKD 456


>gi|167745717|ref|ZP_02417844.1| hypothetical protein ANACAC_00410 [Anaerostipes caccae DSM 14662]
 gi|167655029|gb|EDR99158.1| hypothetical protein ANACAC_00410 [Anaerostipes caccae DSM 14662]
          Length = 466

 Score =  329 bits (843), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 196/475 (41%), Positives = 262/475 (55%), Gaps = 54/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  + P  + +YVCGPTVY++ HIGNARPMI+FD + R   Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPVHPGKVGIYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S       + I  +  ++  KD   L     THQP+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVSA------TEIAERYIEECKKDMEGLNVKPATHQPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  GHAYE N  + F T S   YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIDGMIRMIGTLIEKGHAYEVNGTVYFKTRSFDGYGKLSKKNIDDLEAGHRDIKVRG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     E  W SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKQDPLDFVLWKPKKEGEIAWPSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQS  C D  E  AN W+HNGFLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 FPHHENEIAQSEACND--ECFANYWMHNGFLNIDNQKMSKSAGNFFTVREISE------- 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFT----------VQR-LTEAEILLSKWPQTSTSKGIIDP 349
            +P  VIR  ML  HYR P++F+          + R LT  +++  +  +  T+ G  + 
Sbjct: 284 KYPLQVIRFFMLSAHYRNPLNFSDTLVESAKNGLDRILTAIDLVRDQADKPETAAGKEEE 343

Query: 350 AVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNH--DLLPIFNASA 389
           A L            A+ +D NT  A+ A+ +L        +ES+ ++   LL I     
Sbjct: 344 ANLEEARKLVGKFEEAMEDDFNTADAVSAIFELVKLANTTVKESSSDYAAKLLEIMETLC 403

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGIE  +E    +  I      +++    K K F+ AD IR +L  KG IL+D
Sbjct: 404 GVLGIETKQEEDILDEEIERMIEERQQ--ARKEKDFARADEIRDELLEKGIILKD 456


>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 465

 Score =  329 bits (843), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 192/470 (40%), Positives = 254/470 (54%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E  ++        +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKEGVTV------FELAERFIQEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQTLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQS-EASTGKPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------------KWPQTSTSKGIIDPAV 351
             +RL ML  HYR+P++F++  + +AE  L              K   TS S      AV
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAESALKRIYTCYENLEYLIKNGTTSNSSDSTLKAV 344

Query: 352 L--------SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI 394
           L         A+ +DLNT  A   L ++ RE     +T + D+L +   +      ILGI
Sbjct: 345 LKELKAKFIDAMEDDLNTAEATGYLFEMVREINTHSNTCSKDVLILARDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               E     I   I +LV++R    K K F  AD IR  L S G+I+ D
Sbjct: 405 LEQYEEKKDEIPPEILELVEKRNEARKAKNFLEADRIRDDLRSLGYIVLD 454


>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 467

 Score =  329 bits (843), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 186/488 (38%), Positives = 267/488 (54%), Gaps = 55/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ RK  EF  ++   ++MYVCGPTVY+F H+GNARP  VFD L R   Y   E 
Sbjct: 1   MKIYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY++N TD+DDKII+R+ +E  S P       +  K  +++  D   L     T  P+
Sbjct: 60  -VTYIQNFTDVDDKIIKRSHEEGIS-P-----EEVAEKYIKEYFIDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I  +I  +Q++I  G+AYEA  +++F T     YG  S + I+E ++G R+     
Sbjct: 113 VTDNIDNIIVFVQDLIDKGYAYEAGGDVLFRTRKFKEYGKLSHQNIEELELGARIDVDDK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS+ YLG   DIH GG DL FPH
Sbjct: 173 KEDPLDFVLWKAKKEGEPGWQSPWGEGRPGWHIECSVMSNRYLGNTIDIHAGGQDLQFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     A  W+HNG++N++G KMSKS GNF T+ ++      G      
Sbjct: 233 HENEIAQSECRNG-HTFARYWMHNGYINVDGEKMSKSLGNFFTVRDISNKYDLG------ 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLT----EAEILLSKWPQTSTSKGIIDPA 350
            ++R  +L T YR P++F+          ++RLT     AE +L     +S      D  
Sbjct: 286 -LVRFFLLATQYRNPVNFSDTVLEQAKAGLERLTNARDNAEFILGNLADSSLRDEEKDMV 344

Query: 351 V---------LSALYNDLNTVSAIQALHKLAR--------ESTKNHDL--LPIFNASAHI 391
                     + A+ +DLNT  AI  + +LA+        +S+K      L IFN    +
Sbjct: 345 AGLDKYRERFIEAMDDDLNTADAISVIFELAKFMNTNISDQSSKEFVQLNLDIFNELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I       + ++S  +E L+ +R    K K F+ AD IR +L + G  +ED +     
Sbjct: 405 LNIANKSVEEDDSLSQKVEDLIAKRAQAKKEKNFALADQIRDELTAMGIAIEDTR----- 459

Query: 452 QRMTRWKQ 459
            +  +WK+
Sbjct: 460 -QGVKWKR 466


>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 465

 Score =  329 bits (843), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 184/470 (39%), Positives = 258/470 (54%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E  ++        +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKEGITV------FELAERFIQEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSKGIIDPA 350
             +RL ML  HYR+P++F++  + +AE+              L+     +S +  ++  A
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDMLKAA 344

Query: 351 V-------LSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI 394
           +       + A+ +DLNT  A   L ++ RE     ++ + + L     +      ILGI
Sbjct: 345 IEDLKAKFIDAMEDDLNTAEATGYLFEMVREINTYANSCSKETLTFAKDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   + I   I +LV++R    K K F+ AD IR +L+S G+I+ D
Sbjct: 405 LEQYSEKEEAIPQEILELVKKRNQARKAKNFAEADRIRDELKSLGYIVLD 454


>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 472

 Score =  329 bits (843), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 194/476 (40%), Positives = 265/476 (55%), Gaps = 52/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL  K  EF+ ++   ++MYVCGPTVYD AHIG+AR  IVFDV+ R   Y  G +
Sbjct: 2   IRVFNTLTEKKEEFKPLNDKTVKMYVCGPTVYDHAHIGHARSAIVFDVIRRWFEYR-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TD+DDKII+R+++E   IP  +    +  K  + + +D   L    PT++P+
Sbjct: 61  -VIYVRNYTDVDDKIIKRSKEE--GIPWYE----VAKKYIESYEEDMKALNIKEPTYKPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I +I+ +I  G+AYE+  ++ F       YG  S+RK +E   G R+     
Sbjct: 114 VTEHIEEIIEMIKGLIAKGYAYESEGDVYFSVEKFSEYGKLSKRKTEELIAGARIEPGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+S   EPGWESPWG GRPGWHIECSAM+  YLG+  DIHGGGLDLIFPH
Sbjct: 174 KKNPLDFALWKKSKEGEPGWESPWGIGRPGWHIECSAMAMKYLGRTMDIHGGGLDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+ +   KMSKS GNF TI ++L       + + +
Sbjct: 234 HENEIAQS-EAYTGKSFVRYWLHNGFVMVNKEKMSKSLGNFFTIKDIL-------KEFSS 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+RL +L THYR PIDF+ +RL +AE    +      SK II+                
Sbjct: 286 DVLRLFLLSTHYRSPIDFSFERLKDAERSFGRLLNFIESKEIIEKLPTFEKNSEIFDVEN 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNAS 388
                 SA+ +D NT  A+  + +L +E+    D                   + I  + 
Sbjct: 346 YKLQFESAMDDDFNTARALGVIFELVKEANLIKDKAIKENKISNKEKETILKAIGIVESY 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LG ++ K+         I+ L+  R  L K K F  AD IR  L+  G ILED
Sbjct: 406 LKLLGFKLEKKKQEGIEDELIKLLIDVRSELRKRKAFDLADKIRDGLKDLGIILED 461


>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
 gi|187629845|sp|A5IBG0|SYC_LEGPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 456

 Score =  329 bits (843), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 197/474 (41%), Positives = 263/474 (55%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   SI        +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASERDVSI------DELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G AY   N ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L+          
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVLKEHH------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSK--GIIDPAVLS 353
             VIR  +L +HYR P++++ + L  A+  L +         PQT+ SK           
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFNQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEHLNKNI 405
           A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +  
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEE 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 406 KLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELED------GATGTTWRR 453


>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|229558612|sp|B3GXR0|SYC_ACTP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 459

 Score =  328 bits (841), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 184/468 (39%), Positives = 266/468 (56%), Gaps = 42/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+ + + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NEMCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R   L  HYR  +++++  L  A   L +            + +  +  ++ A  +
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVE-AFKA 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCKEH 400
           A+ +D NT  A+  L ++ARE          K + L       A +LG+     E   + 
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAARLKELAGVLGLLYQDPEAFLQG 404

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              N  +A IE L+++R      K ++ AD +R +L++   +LED  N
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN 452


>gi|289579166|ref|YP_003477793.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528879|gb|ADD03231.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 466

 Score =  328 bits (841), Expect = 1e-87,   Method: Compositional matrix adjust.
 Identities = 200/491 (40%), Positives = 265/491 (53%), Gaps = 62/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EFQ ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y  G K
Sbjct: 1   MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKELAEKYIHEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+    YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKGYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWGRGRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQS-EALYGQQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQ-------------TSTSKGII 347
            V+RL ML+ HYR PI+F++  + +A    E LL+                     K I+
Sbjct: 285 EVLRLFMLIAHYRNPINFSLDLMDQANSAYERLLNAVANLKHLFTVCKERELNEEEKRIV 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ +  N            +L +F   + I
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTANINLSGNSSKELVKYILDMFLKLSEI 404

Query: 392 LGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           LG+    V  +  ++ I   IEK  Q R    K K +  AD IR +L  KG ILED   P
Sbjct: 405 LGLFYRSVKTDIDDEEILALIEKRQQAR----KEKNWKLADEIRDRLREKGIILED--TP 458

Query: 449 DNGQRMTRWKQ 459
           +      RWK+
Sbjct: 459 EG----VRWKR 465


>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226735066|sp|B5YID4|SYC_THEYD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 487

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 205/507 (40%), Positives = 267/507 (52%), Gaps = 73/507 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  K+ EF+ I+   + +Y CG TVYD  HIG+AR  +VFDV+ + LRY   E 
Sbjct: 1   MRVFNTLTDKLEEFKPINDKKVGIYACGVTVYDLCHIGHARSAVVFDVIVKYLRYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII RA +E  S         I  K T ++ KD  RL       +P+
Sbjct: 60  -VKFVKNFTDIDDKIINRANKEGVSW------KEIAEKYTGEYYKDMDRLGITRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           AT HI +MI +IQ +I  G+AYE        + F     P YG  S++KIDE   G RV 
Sbjct: 113 ATEHINEMIEIIQTLINKGYAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL
Sbjct: 173 VDERKKSPLDFALWKASKPGEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  A  WIHNGF+ +   KMSKS GN + I +LL+       
Sbjct: 233 IFPHHENEIAQSE-AFTGKPFAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDI------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------- 340
            + A  +RL +L +HYR PI+F  + + EAE  + +   T                    
Sbjct: 286 -YDAEALRLFLLSSHYRSPIEFAHEYIKEAEATVDRVYSTIMRIEDFEKIEINDKSSIEF 344

Query: 341 STSKGIID---PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL----- 392
              K +++   P    A+ +D NT  A+  L +  +E  +  D  P  N     L     
Sbjct: 345 DKVKAMLENLKPEFEKAMDDDFNTAKALGILFEFIKEINRFMDKKPSQNKEIDFLVTAKR 404

Query: 393 GIEVCKEHLN----------------KNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
            I+     LN                K I+I    I +L++ER    K K +  AD IR+
Sbjct: 405 AIKEIGSVLNLFQRQPVDWYRDLLKVKKIAIKEEEINRLIKERTEARKNKDWKKADSIRE 464

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
           QL SKG ILED   PD     T WK K
Sbjct: 465 QLLSKGIILED--KPDR----TIWKVK 485


>gi|190575186|ref|YP_001973031.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190013108|emb|CAQ46740.1| putative cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 458

 Score =  328 bits (840), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 184/479 (38%), Positives = 262/479 (54%), Gaps = 48/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N L R++  F  +DP+   +YVCGPTVY++ HIGNAR  +VF VL  LLR  +G  
Sbjct: 3   LRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y RNITD+DDKI   AR++   +PI    S IT +    + +D   L  + P  +P 
Sbjct: 61  GLRYARNITDVDDKINTAAREQ--GVPI----STITDRFAAAYREDMAALGVVPPDIEPE 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+PQ+I +I+ +I +GHAY A   ++F  +S   YG  SRR  +E   G RV    +
Sbjct: 115 VTAHMPQIITMIEQLIANGHAYAAEGHVLFAVASFDGYGKLSRRDPEEMLAGARVDVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FPH
Sbjct: 175 KRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      A  W+HNG LN  G KMSKS GN   +++L+       R  P 
Sbjct: 235 HENEIAQSECAHGGRIFARYWLHNGMLNFGGAKMSKSLGNIERVHDLV-------RQHPP 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------TSKGIIDPAVLSALYND 358
             +RLA+L  HYR+P+D++   + ++   L +   T        +  +I  +V + L +D
Sbjct: 288 EALRLALLSAHYRQPLDWSDGLIEQSVRTLDRLYGTLRELASIEASAVIPASVEATLDDD 347

Query: 359 LNTVSAIQALH----------------KLARESTKNHDLLPIFNAS-AHILGIEVCKEHL 401
           LNT  A+  +                 +L  E       L +  A  A   G        
Sbjct: 348 LNTPQALAEVARIAADARRATDPAEQARLKGELLGAGLALGLLQADPAQWFGTAAG---- 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +      I+ L+ ER    K + F+ +D IR QL ++G +LED        +  RW +K
Sbjct: 404 DGGDDARIQGLIDERAAAKKARDFARSDAIRDQLAAEGIVLEDTP------QGVRWSRK 456


>gi|254281834|ref|ZP_04956802.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678037|gb|EED34386.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 461

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 172/382 (45%), Positives = 224/382 (58%), Gaps = 24/382 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YNT  RK   F   DP+ + MYVCGPTVY+ AHIGNARP++VFD L R+LR  Y  
Sbjct: 3   ELALYNTFSRKKEIFTPADPNRVTMYVCGPTVYNLAHIGNARPVVVFDTLNRVLRSRY-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITDIDDKIIE AR     I        +T + T ++ +D   L  L P  +P
Sbjct: 61  PNVIYARNITDIDDKIIEAARSAGTDI------KDVTDEFTAKYREDMGNLNTLIPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT++I  M+ L++ ++   HAY A   ++F   S+  YG  S R +D+   G RV    
Sbjct: 115 HATDNIGPMLDLMERLLAGDHAYVAEGHVLFAVDSMAEYGQLSGRSLDDMLAGARVEVAS 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S+  EPGWESPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIFP
Sbjct: 175 YKRHPGDFVLWKPSSDDEPGWESPWGRGRPGWHLECSAMIKAHLGDTIDIHGGGRDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQSCCA   E     W+HN +L+++G KMSKS GN  T+ ELL+       S+ 
Sbjct: 235 HHENERAQSCCAYGGE-FVRYWMHNAYLDMDGEKMSKSLGNVRTVRELLQ-------SYR 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSAL 355
             V+R A+L  HYR  + F+   L  A+  L  +           P        AV  AL
Sbjct: 287 GEVLRFALLSAHYRSELTFSESLLDNAKSALDSFYSALRQVADTAPEAVEASETAVAQAL 346

Query: 356 YNDLNTVSAIQALHKLARESTK 377
            +DLNT  AI  LH +++   K
Sbjct: 347 LDDLNTPQAIAELHAVSKRLNK 368


>gi|225181302|ref|ZP_03734747.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168082|gb|EEG76888.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 469

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 269/491 (54%), Gaps = 59/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL RK  EF  ++   + +Y CGPTVYD+ HIGNAR  IVFDV+ R LR+   + 
Sbjct: 3   VRVFNTLTRKKEEFVPVEGKKVGIYACGPTVYDYFHIGNARIFIVFDVIRRYLRWRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I+RA +   ++P       +  +  + + +D   L        P+
Sbjct: 62  -VTFVQNFTDIDDKMIKRANELGITVPE------LAERYIEAYFEDVEALGVEPADEHPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ LIQ +   G AYE + ++ F T +  NYG  S + +DE + G RV     
Sbjct: 115 ATEHIEEMVELIQKLEAKGMAYEVDGDVYFHTPAFDNYGELSHQPLDELESGARVDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF+LWK+  P EP WESPWG+GRPGWHIECS MSS YLG   DIH GG DLIFPH
Sbjct: 175 KKHPLDFVLWKKQKPGEPAWESPWGKGRPGWHIECSVMSSKYLGDTLDIHAGGPDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS  A   +  A  W+H G+LN+   KMSKS GNF+T+ E+        +    
Sbjct: 235 HENEKAQSEGATG-QPFAKYWLHAGYLNINQEKMSKSLGNFMTVREIR-------KQIDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWP--QTSTSKGIID 348
            ++R  ML  HYR PI+++   L +A+               LL K P  Q  ++     
Sbjct: 287 QIVRFFMLSAHYRNPINYSPDLLEQAKSGLDRLNNVVYNLRDLLEKLPEGQGDSADATER 346

Query: 349 PAVL--------SALYNDLNTVSAIQALHKLAREST---KNHDL--------LPIFNASA 389
            A L         A+ +D NT   +  L  +ARE+    KN  +        L +F    
Sbjct: 347 LAALEAHRGRFVEAMDDDFNTADGLAVLFDVARETNAYLKNAQVSRQVVEKTLALFEELG 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG    ++  ++++   + +++++R    K K +++AD IR QL++ G +LED   P 
Sbjct: 407 SVLGF--FQKQDDEDLDATVNEMIEKRQAARKEKDWATADAIRDQLQAMGIVLED--TPQ 462

Query: 450 NGQRMTRWKQK 460
                 RW++K
Sbjct: 463 G----IRWRRK 469


>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254765173|sp|B9MMM6|SYC_ANATD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 465

 Score =  327 bits (839), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 184/470 (39%), Positives = 257/470 (54%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E  ++        +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKEGITV------FELAERFIQEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSKGIIDPA 350
             +RL ML  HYR+P++F++  + +AE+              L+     +S +   +  A
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344

Query: 351 V-------LSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI 394
           +       + A+ +DLNT  A   L ++ RE     ++ + + L     +      ILGI
Sbjct: 345 IEELKAKFIDAMEDDLNTAEATGYLFEMVREINTYANSCSKETLTFAKDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   + I   I +LV++R    K K F+ AD IR +L+S G+I+ D
Sbjct: 405 LEQYSAKEEAIPQQILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLD 454


>gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 473

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 191/478 (39%), Positives = 257/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 345

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E   T N  L     A   I+G+
Sbjct: 346 DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L   ++        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILED 463


>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 474

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 191/493 (38%), Positives = 262/493 (53%), Gaps = 59/493 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN L RK   F  +    +  Y CGPTVYD+ HIGNARP IVFDVL R L +   E 
Sbjct: 3   LALYNDLTRKKEPFVPLHEGKVAFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEFRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I RA ++  ++        +  K    + +D   L     +  PR
Sbjct: 62  -VTFVQNFTDIDDKMIARANRDGVTV------QQLAEKTIADYYEDADALGIKRASFYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IP++I +IQ II +GHAY A+  + FD  S P YG  S + +D+ + G R+     
Sbjct: 115 ATEYIPKIIAMIQRIIDNGHAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARIEVDDV 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK   P EP WESPWG GRPGWHIECSAMS+  LG   DIH GG+DL+FPH
Sbjct: 175 KRSPLDFVLWKPQKPGEPAWESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGIDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +     W+HN ++ +   KMSKS GNF+       T +   + +P 
Sbjct: 235 HENEIAQTEAATG-KPFVKYWLHNEYILINAEKMSKSLGNFL-------TARAARQKFPP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG--------------- 345
             IR+ ML  HYR PI+FT + L +A    E L + W     +KG               
Sbjct: 287 LAIRMFMLGAHYRSPINFTPEGLEQAAAAVERLRNCWSDLQFAKGGRLGETSAAGAALMA 346

Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASAH-------- 390
                     +A+ +D NT +AI  + +   E  K    N  L P   A+A         
Sbjct: 347 ALDTFRADFTAAMDDDFNTAAAIGVIFEAVTEVNKYLKGNEKLDPAAVAAAEKFFGDIDS 406

Query: 391 ---ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I+GIE  K+  + + +  IE L+ ER    K + F  +D IR +L ++G ILED   
Sbjct: 407 VMGIIGIEQEKKEESGDEAARIEPLIAERNAARKARDFKRSDAIRDELAAQGIILED--T 464

Query: 448 PDNGQRMTRWKQK 460
           P      T+WK+K
Sbjct: 465 PQG----TKWKKK 473


>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 456

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 196/477 (41%), Positives = 268/477 (56%), Gaps = 43/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+L +K   F++I P  ++MYVCG TVYDF H+G+AR +IVFD++YR  +    E 
Sbjct: 2   IKLFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA ++  +        ++T +   +   D   L  ++P  +P+
Sbjct: 61  -VTYVRNITDIDDKIITRAAEQGVTY------GVLTKQFIDEMNADAEALGVISPDAEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +IQ +I  G+AY  +NN++ +  S    YG  S + +++ + G RV    
Sbjct: 114 ATESIDAMIIMIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSLEDLRAGNRVEVDK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKN  DF+LWK + P EP W SPWG+GRPGWHIECSAMS+ +LGK FDIHGGG DL FP
Sbjct: 174 FKKNSFDFVLWKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +  +  AN W+HNGF+ ++  KMSKS GNF TI E+L         + 
Sbjct: 234 HHENEIAQSEAFNGCQ-MANYWLHNGFVKVDNEKMSKSLGNFFTIREIL-------NHYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKGIIDPAVL 352
             ++R  +L   YR P++++   L +A+  L++             Q    K        
Sbjct: 286 PEIVRFFVLKAQYRSPLNYSDTHLEDAKQGLTRLYLAIRGNDTRIDQEIDWKNNFASQFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTK-NHDL-LPIFNASAHILGI-EVCKE-HLNKNI--- 405
            AL +D NT  AI  L  LA E  K N D    +    A+ILGI E+  E  L  NI   
Sbjct: 346 DALDDDFNTSEAISILFSLANEVNKSNQDQEKQLLIQLANILGILEMDPELFLRGNIKSS 405

Query: 406 --SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              I I+ L+ +RL   K K +  AD IR  LE    +LED  N       T W++K
Sbjct: 406 DNDIDIDLLISDRLSAKKNKDYQKADEIRIFLEGHDILLEDTPNG------TIWRKK 456


>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123131947|sp|Q0I1Q1|SYC_HAES1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 459

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 194/481 (40%), Positives = 267/481 (55%), Gaps = 50/481 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII R      S+   +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIRR------SLENRETCEQLVDRMVVEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY A+N +++FD  S   YG  SR+ + + + G RV    
Sbjct: 114 ATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGNRYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----------L 352
           A  +R  +L  HYR  ++++ + L  A   L +    +  +G    AV            
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLDLAHGALERL--YTALRGTDKSAVAFGGENFIAQFT 343

Query: 353 SALYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI-----EVCKE 399
            A+ +D NT +AI  L ++ARE    KN D      L       A ILG+     E   +
Sbjct: 344 EAMNDDFNTPNAISVLFEMAREINRLKNEDKLLADGLAARLRELAGILGLLEQDPEDFLQ 403

Query: 400 HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             + +  IA IE L+++R    + K ++ AD  R +L + G ILED      G   T W+
Sbjct: 404 AGSDDAEIAKIEALIKQRNDARQAKDWARADAARNELTTMGVILED------GSNGTMWR 457

Query: 459 Q 459
           +
Sbjct: 458 K 458


>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 459

 Score =  327 bits (838), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 188/481 (39%), Positives = 267/481 (55%), Gaps = 50/481 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--YYG 62
           +KI+NTL+R+   F  I P+ + MYVCG TVYD  HIG+ R  + FDV+ R LRY  Y+ 
Sbjct: 2   LKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLRYLGYH- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              +TYVRNITD+DDKII+RA + H +         +  +   +  KD   L    P  +
Sbjct: 61  ---LTYVRNITDVDDKIIKRALENHETC------EHLVDRMVAEMYKDFDALNIQRPDFE 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+HIP++I L+Q +I +GHAY A N +++FD  S P YG  SR+ + + + G RV  
Sbjct: 112 PRATHHIPEIIALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGARVEI 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+
Sbjct: 172 NDIKKNPMDFVLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLM 231

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L+        
Sbjct: 232 FPHHENEIAQSCCA-HGGAYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLQ-------H 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVL 352
           + A  +R  +L  HYR  ++++ + L  A   L +            T+        A  
Sbjct: 284 YDAESVRYFLLTAHYRSQLNYSEENLKLAHSALERLYTALRGTDANATAAGGEQFIEAFK 343

Query: 353 SALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNAS----AHILGI------EVCK 398
           +A+ +D NT  A+  L  +ARE  K     +     F A     A +LG+         +
Sbjct: 344 AAMDDDFNTPGALSVLFDMARELNKLKAEQNPQTDAFAARLRELAGVLGLLYQDPETFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             ++ + +  IE L+ +R      K +++AD  R +L + G ++ED      G   T W+
Sbjct: 404 AGMDDDETKIIETLIAQRNQARANKDWATADAARDKLAAMGVVIED------GANGTTWR 457

Query: 459 Q 459
           +
Sbjct: 458 K 458


>gi|330503048|ref|YP_004379917.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328917334|gb|AEB58165.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 461

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 188/467 (40%), Positives = 263/467 (56%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ ++ +++RMYVCG TVYDF HIG+AR M+ FDV+ R LR    + 
Sbjct: 3   LSIYNTLSKVKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        +    +  +      +D  RL  L P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIKRANEN------GEPFEALVERMIAAMHEDEARLNVLRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M  +IQ +I  G AY   N ++ +  +    YG  SRRKIDE K+G R+    
Sbjct: 115 ATGHIAGMHQMIQTLIDKGFAYAPGNGDVYYRVTKFETYGKLSRRKIDELKIGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG+GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 175 IKEDPLDFVLWKAAKPGEPSWESPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 235 HHENEIAQSEAATG-KQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKG-IIDPAVLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++       P+ + + G        SA+
Sbjct: 287 PEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAGGEAFVERFGSAM 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH------- 400
            +D N+  A   L ++ RE  +  +        L       A +LG+   +         
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRESDLQAAAGLAAQLKQLASVLGVLQLEPDAFLQAGA 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             K  +  +E L+  RL     K ++ +D IR QL + G +LED K 
Sbjct: 407 AGKVDAAEVEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGKG 453


>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
 gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
          Length = 571

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 193/500 (38%), Positives = 273/500 (54%), Gaps = 74/500 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++ +YNT  RK  +F+  DP   + MYVCG T YD +HIG+AR  + FDVLYR LRY  
Sbjct: 72  RELHLYNTKSRKKEQFRPRDPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLD 131

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+ 
Sbjct: 132 YE--VRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRFSDDFLSDMANLQCLPPSV 183

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI ++I +I+ I+ +  AY    ++ F   + P YG  S RK+D+ + G RV  
Sbjct: 184 EPRVSDHIHEIINMIKQILDNSCAYVVGGDVYFSVENFPEYGELSGRKLDDNRAGERVAV 243

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DLI
Sbjct: 244 DERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 303

Query: 242 FPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS   CC    + T N WIHNGF+N+  +KMSKS GNF+TI +++E     
Sbjct: 304 FPHHENEIAQSRAACC----DSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM---- 355

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------SKWPQTSTSKGI 346
              +    +R+ +L THYR PI++T+++L  A   L            S   Q S +   
Sbjct: 356 ---YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEESCQQQGSNTGNS 412

Query: 347 IDPAVL-----------SALYNDLNTVSAIQALHK---------LARESTKNHDLLPIFN 386
           + P  L           +++ +DL+T  A+ A+ +           R+  K    L   +
Sbjct: 413 LPPNTLNYIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLEALS 472

Query: 387 A----------------SAHILGIEVCKEHLNKNISIAIEKLVQ---ERLILLKMKKFSS 427
           A                S++   ++  ++   +  SI  E ++Q   ER    K K++  
Sbjct: 473 ALDEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVLQKIEERTAARKAKQYEK 532

Query: 428 ADYIRKQLESKGFILEDYKN 447
           +D IRK+L + G  L D  N
Sbjct: 533 SDEIRKELAAVGIALMDGPN 552


>gi|330963331|gb|EGH63591.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 460

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 182/478 (38%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++  ++T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDVLTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIEKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          DPA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAADPAGGEAFVERFTAAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE         T    L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 482

 Score =  327 bits (837), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 187/483 (38%), Positives = 270/483 (55%), Gaps = 46/483 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KI+NTL R+   F+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR   
Sbjct: 22  KNMLKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLG 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  
Sbjct: 82  YD--LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDF 133

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT+HIP++I +++ +I  GHAY ANN +++FD  S   YG  SR+ +D+ + G R+ 
Sbjct: 134 EPRATHHIPEIIEIVEKLIARGHAYVANNGDVMFDVESFKEYGKLSRQDLDQLQAGARIE 193

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 194 INEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 253

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA    +  N WIH+G + ++  KMSKS  NF TI ++L        
Sbjct: 254 MFPHHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVL-------N 305

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIID--PAV 351
            + A  +R  +L  HYR  ++++ + L  A+  L +         Q++ + G  +   A 
Sbjct: 306 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVEAF 365

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
             A+ +D NT +A+  L ++ARE        + K + L       A ILG+      +  
Sbjct: 366 REAMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLCELAGILGLLQQDPEKFL 425

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +   + +    IE L+++R      K +++AD  R +L + G +LED      G   T W
Sbjct: 426 QAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLED------GPNGTTW 479

Query: 458 KQK 460
           +++
Sbjct: 480 RKQ 482


>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 454

 Score =  327 bits (837), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 184/457 (40%), Positives = 250/457 (54%), Gaps = 35/457 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY++  R   EF  I P  + MYVCG TVYD  HIG+AR M+VFD++ R  R    E  V
Sbjct: 4   IYDSHARAKREFVPIKPKTVGMYVCGMTVYDRCHIGHARVMVVFDMVVRYFRASGYE--V 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII RA +   SI        +T +  +    D   L CL PT +PRAT
Sbjct: 62  HYVRNITDIDDKIIARAAENKESI------RSLTERYIEAMHDDAAALGCLLPTAEPRAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             +  M+ +I+++I  GHAY A N ++ FD S+   YG  S R  D+ + G RV     K
Sbjct: 116 ESVGDMVAMIESLIERGHAYRAANGDVYFDVSTFDRYGELSNRNPDDLRAGARVEIDEAK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
            +P DF+LWK   P +P W++P+G GRPGWHIECSAMS+  LG  FDIHGGG DL FPHH
Sbjct: 176 TDPLDFVLWKAEKPGDPSWDAPFGPGRPGWHIECSAMSTRALGATFDIHGGGQDLQFPHH 235

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS CA       N W+HNGF+ +   KMSKS GNF T+ E++       R +   
Sbjct: 236 ENEIAQSECATG-HHYVNYWMHNGFVRINEEKMSKSLGNFFTVAEVM-------RQYHPE 287

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALYND 358
           VIRL +L +HYR P++++ Q L  A   L++W       PQ  T    +       + +D
Sbjct: 288 VIRLFVLSSHYRSPLNYSDQNLDAARASLTRWYTAIKDAPQNGTPNPEVMARFRGVMDDD 347

Query: 359 LNTVSAIQALHKLARE--STKNHDLLPIFNASAHILG---------IEVCKEHLNKNISI 407
            NT  A+  + +   E   +K+ +      A   IL          +       ++    
Sbjct: 348 FNTPEALAIVFEQISELNRSKDANCAATIKAIGEILNLGQHDPESFLRWAPSSSDQLSDE 407

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           AIE+ + ER      K F+++D IR +L++ G +LED
Sbjct: 408 AIEQKIAERASARANKDFAASDRIRDELQAAGIVLED 444


>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|187629798|sp|A4XHE2|SYC_CALS8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 465

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 185/470 (39%), Positives = 253/470 (53%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E  ++        +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKEGITV------FELAERFIQEYYKDADRLNVRRATKSPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I++   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARVDPSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSKGIIDPA 350
             +RL ML  HYR+P++F++  + +AE+              L+     +S +   +  A
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344

Query: 351 V-------LSALYNDLNTVSAIQALHKLARE------STKNHDLL---PIFNASAHILGI 394
           +       + A+ +DLNT  A   L ++ RE      S     L     I      ILGI
Sbjct: 345 IEELKAKFIDAMEDDLNTAEATGYLFEMVREINTHANSCSKETLTFAKDILKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   + I   I +LV++R    K K F  AD IR +L+S G+I+ D
Sbjct: 405 LEQYSAKEEAIPQEILELVEKRNQARKAKNFLEADRIRDELKSLGYIVLD 454


>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
 gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
          Length = 480

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 194/500 (38%), Positives = 266/500 (53%), Gaps = 66/500 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     EF  I+P  + MYVCG TVYD  HIG+AR  +VFD++YR L+    E 
Sbjct: 3   LRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TDIDDKII RA ++   +P N+    I+ +  ++F  D  RL    PT QP+
Sbjct: 62  -VTYVRNYTDIDDKIINRANRD--GVPYNE----ISERFIKEFDSDMARLMLRIPTFQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P++I L+Q +I  G AY++ +++ +       Y   S+R +++ + G R+     
Sbjct: 115 ATEHVPEIIALVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIEVDDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+  DIHGGG DLIFPH
Sbjct: 175 KEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+LE        + A
Sbjct: 235 HENEIAQSEAASG-KPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEVLE-------RYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSK------ 344
            V+R  +L  HYR PIDF+ Q L EAE+ L +               P    ++      
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATEESAELE 346

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHIL 392
                I    + A+ +D NT  A+  +  L R   +   + P+             A  L
Sbjct: 347 EKCSAIATRFIEAMDDDFNTAMALGHIFDLVRSINRALPVSPLELLKRVKEEVARIAATL 406

Query: 393 GI---------EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           G+         +  K+     + I    IE L+ ER    + K F  +D IR  L  K  
Sbjct: 407 GVCDSVPAAFLQRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEKDI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
           +L D   P      T WK K
Sbjct: 467 VLLD--TPQG----TTWKVK 480


>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 459

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 269/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCEQLVDRMVVEMYKDFDALNILRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A   L +    +  +G    AV            
Sbjct: 286 AESVRYFLLSAHYRSQLNYSEENLNLAHGALERL--YTALRGTDKSAVAFGGENFVDTFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE----STKNHD----LLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE     T++ D    L       A ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMARELNKLKTEDMDKANGLAARLRELAGILGLLQLDPEQFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K + +AD  R  L   G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTQMGIVLED------GLNGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 469

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 270/480 (56%), Gaps = 62/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  +F+ +DP N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +    
Sbjct: 2   LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQH--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV----KDTTRLACLAPT 120
            +TYVRNITDIDDKII+RA +            I   + T++F+    +D+ +L  L P 
Sbjct: 60  PLTYVRNITDIDDKIIKRANER----------GITIQELTEEFITAMNEDSDKLGVLRPD 109

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P+AT HIPQMI +I+++I +G AY  AN ++ +       YG  S + +D+ + G RV
Sbjct: 110 VEPKATEHIPQMIQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 169

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K++P DF+LWK + P EP W SPWG+GRPGWHIECSAM     G+ FDIHGGG D
Sbjct: 170 DVDTNKRDPLDFVLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADR-----------IEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           L FPHHENEIAQSC A             I+     W+HNGF+ ++  KMSKS GNF TI
Sbjct: 230 LQFPHHENEIAQSCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTI 289

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
            ++L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +   + 
Sbjct: 290 RDVL-------KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNN---VA 339

Query: 349 PAV--------------LSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHIL 392
           PA                +A+ +D  T  A+  L +LA E+ K++  +      A   +L
Sbjct: 340 PAAFELTENTNEYTRKFFAAMNDDFGTAEAMSVLFELANEANKHNSAEFAGCLKALGGML 399

Query: 393 GI--EVCKEHLNKNIS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G+  E  +  L    S        I +L+ +R    + K ++ +D IR  L +   I++D
Sbjct: 400 GLLQEEPQAFLQSGASDDGLSADEINELIAQRKTARETKNWAESDRIRDVLAAHKIIVKD 459


>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|187629806|sp|A3DH43|SYC_CLOTH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 468

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 178/475 (37%), Positives = 260/475 (54%), Gaps = 53/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF  ID   ++MY CGPTVY++ HIGNARP I+FD L R L Y     
Sbjct: 1   MRLYNTLTRKKEEFHPIDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTLRRYLEY--KGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA +E  ++        +  K   ++  D   L     T  PR
Sbjct: 59  NVKFVQNFTDIDDKMIKRANEEGITV------KELADKFINEYFVDAKGLGIKEATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I +I+ +   G AY  + ++ F       YG  S + +++ ++G R+     
Sbjct: 113 ATENIDAIIEMIKKLEEKGFAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARIDVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK   P EP W+SPWG+GRPGWHIECSAM++ YLG+  DIH GG DL+FPH
Sbjct: 173 KKDPMDFALWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  W+HNGF+N++G KM+KS GNF T+ ++ +T       +  
Sbjct: 233 HENEIAQSEAANG-KPFARFWLHNGFINVDGEKMAKSKGNFFTVRDIAKT-------FDY 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIID------ 348
            VIR  ML  HYR PI+F+ + L +A+  L +            + + ++ I D      
Sbjct: 285 EVIRFFMLSAHYRSPINFSAELLEQAKNGLERIYNCLDNLEYLKEHAQAEKITDSERELQ 344

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNASA 389
                     + A+ +D+NT  AI A+  + +E   N +             L +     
Sbjct: 345 NRLLGIKAKFIEAMDDDINTADAIAAIFDIVKEVNTNINATSNSSKEIIDFSLSLIKELG 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGI   ++   K +   IE+L++ R    K K + +AD IR +L+  G ILED
Sbjct: 405 GVLGI--AQKSRQKVLDKEIEELIERRQKARKEKDWKTADEIRDKLKEMGIILED 457


>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 462

 Score =  326 bits (836), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 189/468 (40%), Positives = 264/468 (56%), Gaps = 45/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA +       N+++  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LNYVRNVTDIDDKIIKRAAEN------NESVEALTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L Q++I  GHAY  AN +++F+  + PNYG  SR+ +++ + G RV    
Sbjct: 114 ATRHIGEIIELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPA--------VLS 353
           A  +R  +L  HYR  +++T + L +A   L +       T K  + PA         + 
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARSALERMYTALRGTDKSAV-PAGGDEFKARFIE 344

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILGI-----EV---C 397
           A+ +D NT  A   L  + RE    K+ D+      +A       +LG+     EV    
Sbjct: 345 AMNDDFNTPEAYSVLFDMVREVNRLKSEDMSAANGMAAQLRELASVLGLLEQDPEVFLKG 404

Query: 398 KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 +  +A IE L+Q+RL   K K ++ AD  R +L + G +LED
Sbjct: 405 GAQTEDDAEVAKIEALIQQRLDARKNKDWAQADAARDELTAMGIVLED 452


>gi|212723404|ref|NP_001131561.1| hypothetical protein LOC100192902 [Zea mays]
 gi|194691858|gb|ACF80013.1| unknown [Zea mays]
          Length = 573

 Score =  326 bits (836), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 205/512 (40%), Positives = 278/512 (54%), Gaps = 82/512 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++ +YNT  RK  +F+  DP   + MYVCG T YD +HIG+AR  + FDV+YR LRY  
Sbjct: 74  RELHLYNTKSRKKEQFRPRDPGGEVGMYVCGITPYDDSHIGHARAYVAFDVVYRYLRYLD 133

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII RA Q     P N     ++ + +  F+ D   L CL P+ 
Sbjct: 134 YE--VRYVRNFTDIDDKIIARANQLGED-PFN-----LSKRFSDDFLLDMANLQCLPPSV 185

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI ++I +I+ I+ +  AY    ++ F   S P+YG  S RK+D+ + G RV  
Sbjct: 186 EPRVSDHIDEIINMIKQILDNSCAYVVGGDVYFSVDSFPDYGELSGRKLDDNRAGERVSV 245

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DLI
Sbjct: 246 DERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 305

Query: 242 FPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS   CC    + T N WIHNGF+N+  +KMSKS GNF+TI +++E     
Sbjct: 306 FPHHENEIAQSRAACC----DSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM---- 357

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
              +    +R+ +L THYR PI++T+++L      L    QT      I     S   N 
Sbjct: 358 ---YHPLALRMFLLGTHYRSPINYTIEQLNVTSDRLYYTYQTLLDCEEICQQQQSNTGNS 414

Query: 359 L--NTVSAIQALHKLARESTKNHDL------------LPIFNASAH-------------- 390
           L  NT++ IQ LH+   E++ + DL            L + N   H              
Sbjct: 415 LPANTLNYIQKLHE-EFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLESL 473

Query: 391 ------------ILGI------EVCKEHLNKNI---SIAIEKLVQ---ERLILLKMKKFS 426
                       +LG+      E  ++  +K +   SI  E +VQ   ER    K K++ 
Sbjct: 474 SALEEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAARKAKQYE 533

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +D IRK+L + G  L D   PD     T W+
Sbjct: 534 KSDEIRKELAAIGIALMD--GPDG----TTWR 559


>gi|257462531|ref|ZP_05626942.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060185|ref|ZP_07924670.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685861|gb|EFS22696.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 473

 Score =  326 bits (835), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 194/496 (39%), Positives = 275/496 (55%), Gaps = 67/496 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   +  F       + MYVCGPTVY++ HIGNARP IVFD + R   Y   + 
Sbjct: 2   IKIYNTLSAALDTFVPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-- 122
            V YV+N TD+DDK+I+RA +E         +  I  +  + +++D   + CL    +  
Sbjct: 61  -VKYVQNFTDVDDKMIKRANEE------GSTVEEIAHRYIEAYLED---MKCLHIKEEGM 110

Query: 123 --PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRV 179
             P+AT HI +MI +IQ++I  GHAYEAN ++ F  S+    YG+ S++KI++ + G R+
Sbjct: 111 LRPKATEHIQEMIDMIQSLIDKGHAYEANGDVYFRVSTYHEEYGALSKQKIEDLQSGARI 170

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS+ Y G  FDIHGGG D
Sbjct: 171 EVTELKESPLDFALWKASKPGEPHWDSPWGKGRPGWHIECSAMSNKYFGNSFDIHGGGQD 230

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS C+      A  W+HNG++N++G KMSKS GNF+ + ++L  K F G
Sbjct: 231 LIFPHHENEIAQSKCSCG-GSFAKYWMHNGYINIDGVKMSKSLGNFVLLRDIL--KHFSG 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPA---- 350
           +     VIR  ML  HYR+P++F+   L +A+I L +   +       S+  IDP     
Sbjct: 288 K-----VIRFFMLSAHYRKPMNFSDTELNQAKIALERMENSLIRVHEISEHKIDPQGNSG 342

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASA-- 389
                         + A+  D NT  AI  L +L RE  K      N +   +   +A  
Sbjct: 343 EELKKVLKDTEEKFIEAMDEDFNTAQAIGVLFELVRELNKTLDSPYNQEGYEVLKKTATY 402

Query: 390 ------HILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                  +LGI V  E   +N+++  +E +++ R      K +  +D IR +L   G  +
Sbjct: 403 LYHILYDVLGIAVEVETKVENLTVDLVEFILELRREARAAKNWELSDRIRDRLAELGIQI 462

Query: 443 EDYKNPDNGQRMTRWK 458
           +D      G+  T W+
Sbjct: 463 KD------GKDSTTWR 472


>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 487

 Score =  326 bits (835), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 181/476 (38%), Positives = 265/476 (55%), Gaps = 51/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+  EF  ++P N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +    
Sbjct: 17  ITLYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQH--GY 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I  +T++      +D+  L  L P  +P+
Sbjct: 75  PLTYVRNITDIDDKIIARANEN------GETIGELTARFIAAMNEDSDALGVLRPDIEPK 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI QMI +I++++ +G AY A N ++ +       YG  S + +D+ + G RV    
Sbjct: 129 ATEHIGQMIAMIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSGKSLDDLRAGERVDVDA 188

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP WESPWG GRPGWHIECSAM     G+ FDIHGGG DL FP
Sbjct: 189 NKRDPLDFVLWKAAKPGEPSWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFP 248

Query: 244 HHENEIAQSCCA--------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENEIAQSC A               RI      W+HNGF+ ++  KMSKS GNF TI 
Sbjct: 249 HHENEIAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFFTIR 308

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           ++L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    + 
Sbjct: 309 DVL-------KKYAPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQAAEF 361

Query: 350 AV-----------LSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILG-IE 395
           AV            +A+ +D NT  A+  L +LA E+ K  + +L     A    LG ++
Sbjct: 362 AVREDANDYTRRFFAAMDDDFNTAEAMSVLFELANEANKTGSAELAGCLKALGGTLGLLQ 421

Query: 396 VCKEHLNKN-------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +H  ++        +  IE L+ +R    + K ++ +D IR  L     +L+D
Sbjct: 422 DDPQHFLQSGGEEGGLSADEIEALITQRKTARETKNWAESDRIRDLLAEHKILLKD 477


>gi|298486254|ref|ZP_07004317.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298159261|gb|EFI00319.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 460

 Score =  326 bits (835), Expect = 6e-87,   Method: Compositional matrix adjust.
 Identities = 182/478 (38%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVARWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE         T    L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|257483826|ref|ZP_05637867.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289625911|ref|ZP_06458865.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651301|ref|ZP_06482644.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330868387|gb|EGH03096.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330890007|gb|EGH22668.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330985629|gb|EGH83732.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 460

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 182/478 (38%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE         T    L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|146307594|ref|YP_001188059.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|187629851|sp|A4XVG1|SYC_PSEMY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145575795|gb|ABP85327.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 461

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 187/467 (40%), Positives = 263/467 (56%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    FQ +  + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR    + 
Sbjct: 3   LSIYNTLTKTKDVFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        +    +  +      +D  RL+ L P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIKRANEN------GEPFEALVERMIAAMHEDEARLSVLRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M  +IQ +I  G+AY   N ++ +  +    YG  SRRKIDE K+G R+    
Sbjct: 115 ATGHIAGMHQMIQTLIDKGYAYAPGNGDVYYRVTRFETYGKLSRRKIDELKIGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 175 IKEDPLDFVLWKGAKPGEPSWDSPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 235 HHENEIAQSEAATG-KQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLS-AL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++       P+ + + G         A+
Sbjct: 287 PEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAGGEAYVERFGVAM 346

Query: 356 YNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGIEVCKEH------- 400
            +D N+  A   L ++ RE    +  D+      +      A +LG+   +         
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRESDVQAAAGLAAQLKQLASVLGVLQLEPEAFLQAGA 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             K  +  +E L+  RL     K ++ +D IR QL + G +LED K 
Sbjct: 407 AGKVDAAEVEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGKG 453


>gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
           meningitidis 8013]
          Length = 473

 Score =  325 bits (834), Expect = 7e-87,   Method: Compositional matrix adjust.
 Identities = 191/478 (39%), Positives = 256/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 345

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E   T N  L     A   I+G+
Sbjct: 346 DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILED 463


>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 469

 Score =  325 bits (834), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 184/474 (38%), Positives = 260/474 (54%), Gaps = 53/474 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L  +   F+ I+P  +RMYVCG TVYD+ H+G+AR M+VFD + R LR      
Sbjct: 2   LYIYNSLTNRKEPFRPIEPGRVRMYVCGMTVYDYCHLGHARAMVVFDTVVRYLRS--AGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII RA +      + + ++++T +       DT  L CL P  +PR
Sbjct: 60  RVDYVRNITDVDDKIIRRAAE------LGEPVNVLTERFIAAMHADTAALGCLLPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE--IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           AT ++  ++ LIQ ++  G+AY+A +E  I +       YG  S  +++  + G RV   
Sbjct: 114 ATAYMDAIVALIQRLLDRGYAYQAVDEGSIYYAVERFEGYGRLSGERLEALRAGARVEPG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++ ADF+LWK + P EP W +PWG GRPGWHIECSAM+   LG+ FDIHGGGLDL F
Sbjct: 174 AGKRDAADFVLWKAAKPGEPSWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLKF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A    +  N W+HNG + +   KMSKS GNF T+ E+L+  +      
Sbjct: 234 PHHENEIAQSEAA-WGGRYVNFWMHNGHIRINDEKMSKSLGNFFTVREVLQVYR------ 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDP---AVL 352
            A  IR  +L +HYR P++++   L  +   L +        P T  S  +  P   A  
Sbjct: 287 -AEEIRYFLLSSHYRSPLNYSTSDLDNSRAALERLYLALRDLPFTEASPALAAPYREAFR 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG------------IEVCKEH 400
            A+ +D NT  A+  L  LARE  +  D    F + A  L              +V  E 
Sbjct: 346 QAMDDDFNTPLALAVLFDLAREINRRRDR---FESQAAALAATLRELGGLLGLAQVAPEV 402

Query: 401 LNKN-------ISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             K        + IA   +E L+ ER +  K + F++AD IR +L+++G  LED
Sbjct: 403 FLKGGAGSSVAVGIASERVEALLAERALARKNRDFATADRIRDELQAQGIALED 456


>gi|291522471|emb|CBK80764.1| cysteinyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 466

 Score =  325 bits (834), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 191/478 (39%), Positives = 266/478 (55%), Gaps = 56/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ++   +RMYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLTRRKDEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E          S+I+ +  ++  KD   +     TH P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVDA------SVISERFIKEAQKDMADMNVKEATHHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ ++  GHAY  +  + F T S  +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIDGMIDMIQTLVNKGHAYAVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVNG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPWG GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EEGKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQS  C D+  + A+ W+HNGFLN+   KMSKS GNF T+ E+ E       
Sbjct: 233 FPHHENEIAQSEACNDK--EFAHYWMHNGFLNINNVKMSKSLGNFFTVREIAE------- 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAE------IL--------LSKWPQTSTSK-- 344
            +   V+R  ML  HYR P++F+ + L EA       IL        L+    T T++  
Sbjct: 284 KYDLQVLRFFMLSAHYRSPLNFSAE-LMEASRNGLERILTAIDRLRTLNLQGDTCTAEEN 342

Query: 345 ---GIIDPAVL---SALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
               + D  V    +A+ +D NT  AI A+ ++ + +  +            +L      
Sbjct: 343 EQMKVFDALVAKYEAAMEDDFNTADAISAIFEMVKAANIHVTETSTAAFRDQILSEIVRL 402

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             +LGI+  K+   + +   I+ L+ ER    K K F+ AD IR +L +KG IL+D +
Sbjct: 403 CDVLGIKTEKKE--ELLDDEIQALIDERQAARKAKNFARADEIRDELLAKGIILKDTR 458


>gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 473

 Score =  325 bits (834), Expect = 8e-87,   Method: Compositional matrix adjust.
 Identities = 190/481 (39%), Positives = 258/481 (53%), Gaps = 64/481 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDLEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 EFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 405

Query: 395 -----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                          + L+      IE L+  R      K ++ +D IR  L     ILE
Sbjct: 406 LQRDPTAFLQGSAASDGLSNE---EIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 462

Query: 444 D 444
           D
Sbjct: 463 D 463


>gi|332526279|ref|ZP_08402408.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332110113|gb|EGJ10741.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 457

 Score =  325 bits (833), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 186/461 (40%), Positives = 260/461 (56%), Gaps = 37/461 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL R++  F  ++P  +RMYVCG TVYD  H+G+AR  + FDV+YR L+    E 
Sbjct: 3   LRLHNTLTRRLETFVPLEPGRVRMYVCGITVYDLCHMGHARMNLAFDVVYRWLKASGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +          I  +T +      +D   L    PTH+PR
Sbjct: 62  -VTYVRNITDIDDKIIRRALER------GVGIRALTDEMVAAMHRDFAALGLEPPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +PQM+ +I  +  +G AY A + ++ F     P YG  S + +DE + G RV    
Sbjct: 115 ATEFVPQMLDIIGRLERNGLAYRAEDGDVNFAVRRFPGYGKLSGKSLDELRAGERVAVAG 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FD+HGGG+DL
Sbjct: 175 GKEDPLDFVLWKSAKPEEPAEAKWDSPFGAGRPGWHIECSAMSCALLGERFDLHGGGMDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGFLN++  KMSKS GNF TI ++L  KKF G 
Sbjct: 235 QFPHHENEIAQSEGA-FGHPFVNYWLHNGFLNVDNEKMSKSLGNFFTIADVL--KKFDGE 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------DP---A 350
           +     +R  ML THYR P +F    L EA   L +          +       DP   A
Sbjct: 292 T-----VRFFMLRTHYRSPFNFADSLLDEARAALRRLYTALDGADAVACEVDWSDPRAAA 346

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--EVCKEHLNKNIS 406
             +A+ +D NT  A+  L +LA E  ++ D  +  +  +   +LGI  +  +  L     
Sbjct: 347 FKAAMDDDFNTPGALAVLFELANEFNRSRDAAMARLLVSLGAVLGILQQAPRAFLQAGTG 406

Query: 407 I---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +    I + ++ R    + ++F+ AD IR +L ++G  L+D
Sbjct: 407 VDDAEIARQIEARATAKRERRFADADRIRAELAAQGVELKD 447


>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 461

 Score =  325 bits (833), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 191/483 (39%), Positives = 269/483 (55%), Gaps = 50/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY  Y  
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYNL 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K   YVRN+TD+DDKII+RA +        +    +T +   +  KD   L    P  +P
Sbjct: 62  K---YVRNVTDVDDKIIKRALEN------GETCDQLTERMLAEMHKDFDSLNIARPDLEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT+HIP++I +++ +I  GHAY A+N +++F   + P+YG  SR+ +++ + G RV   
Sbjct: 113 RATHHIPEIIEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++LE        +
Sbjct: 233 PHHENEIAQSSCA-HDGPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLE-------HY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKG-IIDPAVLS 353
            A  +R  ++  HYR  ++++ + L +A   L +         PQ   + G + +     
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTEPQAEPAGGDVFEARFRE 344

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHD------LLPIFNASAHILGI-----EVCKE- 399
           A+ +D NT  A  AL  LARE    K+ D      L       A ILG+     EV  + 
Sbjct: 345 AMDDDFNTPEAYSALFDLAREVNRLKSEDMAQANALAAELRKLAKILGLLEQDPEVFLQG 404

Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               + +    IE L+++R      K ++ AD  R QL + G +LED      G + T W
Sbjct: 405 GAQADDSEVAQIEALIKQRNDARAAKDWAMADSARDQLNALGIVLED------GPQGTTW 458

Query: 458 KQK 460
           ++K
Sbjct: 459 RRK 461


>gi|329769070|ref|ZP_08260492.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839561|gb|EGF89137.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 465

 Score =  325 bits (833), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 184/488 (37%), Positives = 278/488 (56%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + ++MYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVKMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E  S       + +T+K  + F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEEGIST------TELTNKYIEAFFKDYDALGCARATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I +++  G AYE+N ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIIDFIADLVKEGFAYESNGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W+SP+G GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGETIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     +N W+HN F+N++  KMSKS GNF  + +++            
Sbjct: 234 HENEIAQSECHNHA-PFSNYWMHNAFINIDNVKMSKSLGNFRLVKDII-------AEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRL----TEAEILLSKWP------QTSTSKGIIDPAVLSA 354
            V+RL ML  HYR PI++T++ +    T  E L + +          T++ ++D  V++A
Sbjct: 286 MVLRLFMLTVHYRTPINYTLENIELATTNYEKLKTAYQNLQFRLNNETTEEVLDKEVVNA 345

Query: 355 -----------LYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHIL 392
                      + +D NT +A+ + ++L R       + T N + L + NA+    + IL
Sbjct: 346 VTQELEKFEEYMQDDFNTANALSSWYELVRISNSYTSKETVNKETLELLNAAFETYSSIL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI V ++  NK     IE L+ ER    K + F+ AD IR  L+ +G +LED K      
Sbjct: 406 GINVKED--NKLDDSYIENLIAEREQARKDRNFALADKIRDDLKEQGIVLEDTK------ 457

Query: 453 RMTRWKQK 460
           +  RWK++
Sbjct: 458 QGVRWKKQ 465


>gi|296134921|ref|YP_003642163.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795043|gb|ADG29833.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 460

 Score =  325 bits (833), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 191/463 (41%), Positives = 266/463 (57%), Gaps = 40/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R    F  I+P ++RMYVCG TVYD+ HIG+AR M+VFD+L R L+   G +
Sbjct: 4   LHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQ-GLR 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        + I  +T +      +D   L    PTH+PR
Sbjct: 63  -VTYVRNITDIDDKIIRRAQEN------GETIRALTDRFIAAMHEDADALGVERPTHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ LI  +   G AY ++  ++ F   + P YG  S + +DE + G RV    
Sbjct: 116 ATDYVPQMLDLIGKLKTRGLAYRDSAGDVNFHVRAFPGYGKLSGKSLDELRAGERVEVDT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W S  G GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  AN+W+HNGF+ ++G KMSKS GNF TI ++L+       
Sbjct: 236 QFPHHENEIAQSEGASG-KPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDILQHVD---- 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
              A  +RL ++  HYR P++++ + L +A   L++   T+       PA L        
Sbjct: 291 ---AETVRLFIVRAHYRSPLNYSDEHLQDAHAALTRL-YTALDPFADLPARLDWSHPRAQ 346

Query: 353 ---SALYNDLNTVSAIQALHKLARESTKNHD----LLPIFNASAHILGIEVCKEHLNKNI 405
              +A+ +DLNT  A+  L +LA E  K  D     L         L  +  +E L    
Sbjct: 347 AFAAAMNDDLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKA 406

Query: 406 SIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +      +E+LVQER+   + + F+ AD IR +L +KG +LED
Sbjct: 407 AAVDAAWVEQLVQERIAAKQARNFAEADRIRAELSAKGIVLED 449


>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 459

 Score =  325 bits (833), Expect = 9e-87,   Method: Compositional matrix adjust.
 Identities = 187/481 (38%), Positives = 269/481 (55%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVVEMYKDFDALNILRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++  +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTS------KGIIDPAVLS 353
           A  +R  +L  HYR  ++++ + L  A    E L +    T  S      +  +D A   
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVD-AFRE 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT +A+  L ++ARE          K + L       A ILG+      +  + 
Sbjct: 345 AMDDDFNTPNALSVLFEIARELNKLKTQDMAKANGLAARLRELAAILGLLQLDPEQFLQA 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +++    IE L+++R      K + +AD  R  L   G +LED      G   T W++
Sbjct: 405 SSDEDEVAKIEALIKQRNEARVAKDWPAADAARNALTQMGIVLED------GPNGTTWRK 458

Query: 460 K 460
           +
Sbjct: 459 Q 459


>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 459

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 268/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV+           
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVVFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 699

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 256/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 284

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 285 YLLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 338

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 339 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 398

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 399 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 458

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 459 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 518

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 519 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 571

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 572 DPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 631

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 632 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILED 689


>gi|42569504|ref|NP_565717.2| SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA
           ligase/ nucleotide binding [Arabidopsis thaliana]
 gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 563

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 191/496 (38%), Positives = 270/496 (54%), Gaps = 72/496 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K++ ++NT+ RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   
Sbjct: 63  KELWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGY 122

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V+YVRN TD+DDKII RA++        D IS+ + +  ++F +D  +L CL P+ Q
Sbjct: 123 E--VSYVRNFTDVDDKIIARAKELE-----EDPISL-SRRFCEEFNRDMEQLQCLDPSVQ 174

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR ++HIPQ+I LI+ I+ +G+AY+ + +I F     P YG  S RK+++ + G RV   
Sbjct: 175 PRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVD 234

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+PADF LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  FDIHGGG+DL+F
Sbjct: 235 TRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVF 294

Query: 243 PHHENEIAQSCCADRIEKTANI--WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQSC A     ++NI  WIHNGF+ ++  KMSKS GNF TI ++++       
Sbjct: 295 PHHENEIAQSCAAC---DSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL------ 345

Query: 301 SWPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQT------ 340
            +    +RL ++ THYR PI+++               Q L + E  L +   T      
Sbjct: 346 -YHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSV 404

Query: 341 -----------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
                            S S  ++ P  L+A+   L T++ +    K  +++ +   L  
Sbjct: 405 PSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKA 464

Query: 384 IFNASAHILGI------------EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSA 428
           +      +L I            E  KE   K   +  E +   VQER    K K++  +
Sbjct: 465 LETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERS 524

Query: 429 DYIRKQLESKGFILED 444
           D IRK L   G  L D
Sbjct: 525 DAIRKDLAKVGIALMD 540


>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174501|sp|P43816|SYC_HAEIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
 gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 459

 Score =  325 bits (833), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 267/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV            
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVAFGGENFVATFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+++R      K +S+AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSNDDEVAKIEALIKQRNEARTAKDWSAADSARNELTAMGIVLED------GPNGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 462

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/484 (39%), Positives = 277/484 (57%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++   F+ I+   + +YVCG TVYD+ H+G+AR +++FDV+ R LR Y+   
Sbjct: 2   LKIYNTLSKQKEVFRPINADKVGIYVCGMTVYDYCHMGHARILVIFDVIIRHLRRYFPN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA      I   + I  +T++      +D   L  L P  +PR
Sbjct: 61  -VEYVRNITDIDDKIIKRA------IENKEDIYALTNRFIDAMHEDERALGVLPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN + Q+ Y+I+++I  G AY+A+N ++ +      NYG  SR+ ID+ + G R+  + 
Sbjct: 114 ATNAMKQIFYMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKLSRKNIDKLEAGARIEIES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAMS+H+LG  FDIHGGG+DL FP
Sbjct: 174 AKKNPLDFVLWKMSKPNEPSWDSPWGQGRPGWHIECSAMSTHHLGNHFDIHGGGMDLSFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H GF+N++  KMSKS  NF TI  +LE       S+ 
Sbjct: 234 HHENEIAQSEGANNC-TFVNTWMHIGFVNIDDEKMSKSLNNFFTIRSILE-------SYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVL------- 352
              +R  ++ +HYR P++F+   L +A+  LS+        +TS  + +   +       
Sbjct: 286 CETLRYFIMSSHYRSPLNFSDDNLNKAKSSLSRLYTAIRGLNTSSTVTEKVPMYFDYSVR 345

Query: 353 --SALYNDLNTVSAIQALHKLAR----ESTKNHD-------LLPIFNASAHILGIEVCKE 399
              AL ND NT  A+  L +LA+    +  K+ D       LL        IL ++  K 
Sbjct: 346 FNEALDNDFNTPIALSILFELAKTVNLQRKKDVDQANALAQLLKKLGDYIGILQMDADK- 404

Query: 400 HLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            L + IS++   ++  +  R      K F+ +D IR +L   G +LED  N       T 
Sbjct: 405 FLKQGISLSNSEVDVKITSRNEARADKNFALSDQIRDKLAELGIVLEDNAND------TT 458

Query: 457 WKQK 460
           W++K
Sbjct: 459 WRRK 462


>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|171460796|sp|A0LIR9|SYC_SYNFM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 493

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 196/514 (38%), Positives = 264/514 (51%), Gaps = 85/514 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL +   EF  ++P  ++ YVCG TVYD +HIG+AR  IVFDV+YR LR+   E 
Sbjct: 3   LHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGFE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAIS---IITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKII RA         NDA +    I  +    F +D   L  L P  
Sbjct: 62  -VTYVRNFTDVDDKIIRRA---------NDAGTDCRSIAQRYIAAFYEDMDALGVLRPDL 111

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +P AT ++P MI +I+ ++  G AY+A  ++ F+    P YG  S R+I++   G RV  
Sbjct: 112 EPLATENVPGMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEV 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM S +LGK FDIHGGG DLI
Sbjct: 172 DARKRNPLDFVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLI 231

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A  +      W+HNGF+N+   KMSKS GNF+TI ++L+        
Sbjct: 232 FPHHENEIAQSEAAFGM-PFVRYWLHNGFVNINNEKMSKSLGNFLTIRDVLQKVH----- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------ 337
                +R  +L  HYR P+DF+ + + EAE  L +                         
Sbjct: 286 --PETVRFFVLSKHYRSPVDFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQEKAL 343

Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--PIFNASAHI 391
               P+       +  A   A+ ND NT  A+  L  L R   +  D          A  
Sbjct: 344 RGQDPELFDQIAALSGAFREAMDNDFNTAQALGNLFSLQRHLQRFLDKFGRKQLKGPASA 403

Query: 392 L---GIEVCKEHL----------------NKNISIAIEKLVQ---ERLILLKM-----KK 424
           L   G +  ++H                  +++ I    L +   ER I L+      K 
Sbjct: 404 LARAGADAIRDHALVLGLLTREPEAFQAEQRSLKIKSTGLTEAEVERCIELRRQARQDKN 463

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           F+ AD +R+++E KG  LED  +P      TRW+
Sbjct: 464 FAEADRLREEIEKKGIQLED--SPAG----TRWR 491


>gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 473

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 256/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 345

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 DPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILED 463


>gi|58697305|ref|ZP_00372667.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536329|gb|EAL59815.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 415

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/429 (43%), Positives = 256/429 (59%), Gaps = 36/429 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+  VTYVRNITDIDDKII  A ++ 
Sbjct: 1   MYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK--VTYVRNITDIDDKIINAASEK- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N  I  IT+   + F  D   + C  PT++P+AT ++  +I LI++++  GHAYE
Sbjct: 58  -----NSNIESITTYYIKAFHDDMESINCKKPTYEPKATENVDYIIKLIEHLLQSGHAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME----PG 203
           ++  + F+  S   YG+ S +K DE   G+RV    +KK+P DF+LWK +  ++      
Sbjct: 113 SDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENKKHPGDFVLWKPANDIDYKLSSY 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL FPHHENEIAQS  A      A 
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAGSMFAK 232

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGFL +   KMSKS  N + + +LL++   G       VIR A+L THYR+P+D+T
Sbjct: 233 YWMHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG------EVIRYALLKTHYRKPLDWT 286

Query: 324 VQRLTEAEILLSKWPQTS---------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
              +++A+  L+K+ + S          S   I    + AL NDLN   A+  LH++A +
Sbjct: 287 ENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDFIDALKNDLNIPEALAILHEMAAK 346

Query: 375 STKNHD------LLPIFNASAHILGI--EVCKEHLNKNIS-IAIEKLVQERLILLKMKKF 425
             K  +      L   F  SA  +G+     +E     +S   IE+L+  R    + K +
Sbjct: 347 INKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDY 406

Query: 426 SSADYIRKQ 434
           ++AD IR Q
Sbjct: 407 NTADKIRDQ 415


>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 504

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 187/468 (39%), Positives = 262/468 (55%), Gaps = 44/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 43  LKIYNTLSRQKEEFRPITPGKIGMYVCGVTIYDLCHIGHGRTFVAFDVISRYLRYLGYD- 101

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +       N+    +TS+   +  KD   L  L P  +P 
Sbjct: 102 -LTYVRNITDVDDKIIKRAAEN------NETCDALTSRMLIEMYKDFDALNILRPDFEPN 154

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + ++  GHAY A+N +++F  +S P+YG  SR+ +++ + G RV    
Sbjct: 155 ATHHIKEIIALTERLLKRGHAYIADNGDVMFAINSDPDYGLLSRQDLEQLQAGARVEVAD 214

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 215 VKRNPLDFVLWKMSKPNEPSWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGGADLMFP 274

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA+      N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 275 HHENEIAQSTCAND-GPYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLA-------HYD 326

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLS 353
           A  +R  +L  HYR  +++T + L +A   L +              S    I     ++
Sbjct: 327 AETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTALRDTDANHVKSADNEIFKQRFMA 386

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI--EVCKEHLNK 403
           A+ +D NT  A   L  LARE  +         ++L       A+ILG+  +  ++ L  
Sbjct: 387 AMNDDFNTPEAYSVLFDLAREINRLKVDDMAMANELAVQLRQLANILGLLTQNPEQFLQS 446

Query: 404 NISIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              ++       IE L+++R    K K ++ AD  R +L   G ILED
Sbjct: 447 RAQVSHSAEIEKIEALIKQRNDARKNKFWAQADSARDELTRMGIILED 494


>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 475

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 193/495 (38%), Positives = 259/495 (52%), Gaps = 67/495 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN L R+  EF  + P  I  YVCGPTVYD+ HIGNARP +VFD L R + Y   E  V
Sbjct: 5   LYNDLTRRKEEFAPVSPGRIGFYVCGPTVYDYIHIGNARPFVVFDALRRYMEYKGFE--V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK----DTTRLACLAPTHQ 122
            YV+N TDIDDK+I +A Q          + I   +  +QF++    D   L     T  
Sbjct: 63  IYVQNFTDIDDKMINKANQ----------LGITVKELAEQFIEAYFEDIIPLGVRQATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  +I LI  II +GHAY  +  + FD  S PNYG  S + ++E + G R+   
Sbjct: 113 PKATEHIDDIIRLISRIIENGHAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK     EP W+SPWG GRPGWHIECSAM+  YLG   DIHGGG DLIF
Sbjct: 173 ERKRHPLDFVLWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+  A   ++    WIHNG+L +   KMSKS GN + + E+        +++
Sbjct: 233 PHHENEIAQAEAATG-KQFVRFWIHNGYLLINKEKMSKSLGNILNVREIR-------KNF 284

Query: 303 PAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAV- 351
               +RL +L  HYR P+DF          ++QRL      L  + + S  K   D  + 
Sbjct: 285 QPLAVRLFILAAHYRSPLDFSDDSLIQATKSLQRLRNCYSDLLFYMERSQEKNTPDTWLE 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPIFN 386
                      +AL +D NT  A+ A+ ++ R+                 K+ D      
Sbjct: 345 DVVNNGYKRFCNALDDDFNTAGALGAVFEVVRDLNNYLKENETLDKQALIKSKDFFETVE 404

Query: 387 ASAHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               ++GI    E     +S + IE L++ER    K + F+ AD IR +L SKG ILED 
Sbjct: 405 NILGVIGINTIGEEFAGTLSSSEIEGLIKEREAARKKRDFARADAIRNELASKGIILED- 463

Query: 446 KNPDNGQRMTRWKQK 460
             P      TRWK+K
Sbjct: 464 -TPLG----TRWKKK 473


>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 699

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 256/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 284

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 285 YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 338

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 339 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 398

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 399 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 458

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 459 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 518

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 519 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 571

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 572 DPMPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 631

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 632 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILED 689


>gi|260891413|ref|ZP_05902676.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858796|gb|EEX73296.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 355

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 156/330 (47%), Positives = 219/330 (66%), Gaps = 16/330 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+  KI EF+ I+ + ++MYVCGPTVY++ H+GNARP++VFD L R   +  G K
Sbjct: 1   MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHK-GMK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII ++ +E  S       S ++ K  + F +D ++L  L    +P+
Sbjct: 60  -VEFVQNFTDVDDKIINKSMEEGTSA------SEVSEKYIKYFFEDISKLNILESVKRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +IQ +I +G AYE + ++ F+     +YG  S +KI+E ++G R+     
Sbjct: 113 VTENMAEIIEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEI 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+    EP WESPWG+GRPGWHIECSAM+  YLG  FDIHGGG DL+FPH
Sbjct: 173 KKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN W+HNGF+ + G KMSKS GNF  + E+LE  KF G     
Sbjct: 233 HENEIAQSKCAYH-GNFANYWLHNGFIQINGDKMSKSLGNFFLLREILE--KFSGN---- 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
            V+RL +L THYR+PI+F+ + + + +  L
Sbjct: 286 -VVRLFILSTHYRKPINFSFENIEDTKKAL 314


>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 486

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 185/504 (36%), Positives = 272/504 (53%), Gaps = 68/504 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL      F+ + P  +RMYVCG TVYD+ HIG+AR  +VFDVL R L Y     
Sbjct: 2   LRLYNTLSGSKEPFEPLVPGKVRMYVCGVTVYDYCHIGHARSALVFDVLRRYLEY--SGF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TD+DDKII+RA+++  S         +T+     + +D  +L     T +PR
Sbjct: 60  VVEFAKNFTDVDDKIIKRAKEQGVSC------EHVTTTYINAYYEDMEKLGVRRATLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +++ L+  ++  G AY  + ++ F       YG  S+R +D+ + G RV     
Sbjct: 114 ATEHIAEIVRLVDTLLAKGMAYRVDGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG+GRPGWHIECSAM+  +LG+ FDIHGGG+DLIFPH
Sbjct: 174 KRHPMDFALWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMRHLGETFDIHGGGMDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSC A   E  A  W+HNGF+ +   KMSKS GNF TI E+ +  +     WP 
Sbjct: 234 HENEIAQSCGATGKE-FARYWVHNGFVQINQEKMSKSLGNFFTIREIFQKSE-----WPD 287

Query: 305 PV----IRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDP------- 349
            V    +R  +L THYR P+DF+ Q L EA+  L+     + + + S  +  P       
Sbjct: 288 TVTGEMLRYFLLTTHYRSPLDFSDQSLKEAKNALNGFYDLFERLNESAPVHSPGDQSMQE 347

Query: 350 -------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHIL 392
                  A ++A+ +DLNT +A+ AL  L  ++ K  +          +   F A   +L
Sbjct: 348 AMVRTREAFVAAMDDDLNTPNALAALQMLRGDTNKALEAGLSGEMRQMVRQEFRALGIVL 407

Query: 393 GI--------EVCKEHLNKNISIA---------IEKLVQERLILLKMKKFSSADYIRKQL 435
           G+        ++ ++  +   + A         I   +  RL   + K +  AD +R +L
Sbjct: 408 GLLQTDTWRFKIQQQQPSSGGAEASTGTLSDEDIADKLAARLAAKRSKNYQLADQLRAEL 467

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
            S G  +ED ++       +RWK+
Sbjct: 468 ASHGITIEDRQDG-----TSRWKR 486


>gi|330975115|gb|EGH75181.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 460

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 263/478 (55%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 TEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE    +  D+             A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 465

 Score =  325 bits (832), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 183/470 (38%), Positives = 256/470 (54%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +   EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E  ++        +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKEGITV------FELAKRFIEEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++++   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVSINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSKGIIDPA 350
             +RL ML  HYR+P++F++  + +AE+              L+     +S +   +  A
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344

Query: 351 V-------LSALYNDLNTVSAIQALHKLARE------STKNHDLLPI---FNASAHILGI 394
           +       + A+ +DLNT  A   L ++ RE      S     L  +         ILGI
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANSCSKETLTFVKDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   + I   I +LV++R    K K F+ AD IR +L+S G+I+ D
Sbjct: 405 LEQYGAKEEAIPQEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLD 454


>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 459

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 181/464 (39%), Positives = 264/464 (56%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  +F  I P  +++YVCG TVYD+ H+G+AR ++VFD + R       + 
Sbjct: 2   LKIYNSIAREKQDFVPITPGKVKLYVCGMTVYDYCHLGHARVLVVFDTVVRWFEA--NDF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA++       N++I  +T +  Q   +D+  L   +PTH+P 
Sbjct: 60  TVNYVRNITDIDDKIIKRAQEN------NESIEALTQRFIQAMNEDSVALGVSSPTHEPC 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+H+  MI +I  ++    AY+A+N ++ F   + P YG  S + +++ + G RV    
Sbjct: 114 ATHHVKSMIGMISTLVEKNLAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGERVDIDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP WESPWG GRPGWHIECSAM   +LG+ FDIHGGG DL FP
Sbjct: 174 SKKDPLDFVLWKSAKSGEPFWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF T+ E+L       + + 
Sbjct: 234 HHENEIAQSEGA-HDHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREIL-------KLYQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
             V+R  +L  HYR P++++ Q L + ++ L +          I  A +           
Sbjct: 286 PEVVRFFILRAHYRSPLNYSDQHLKDTKLALDRLYIALKEVEPISVARVDWNYPYAQKFK 345

Query: 354 -ALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            A+ +D NT  AI  L  LA +     ++ H  L         L  +  +E+L    + +
Sbjct: 346 RAMDDDFNTPDAIALLFDLASDINKTGSREHAGLLKALGGLLGLLQQNPQEYLQNKAASS 405

Query: 409 --------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   +E+L+QER+   K  ++S AD IRKQL+ +G ILED
Sbjct: 406 ELNSSAHDVEQLIQERINARKEGRYSDADTIRKQLQEQGIILED 449


>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 562

 Score =  324 bits (831), Expect = 1e-86,   Method: Compositional matrix adjust.
 Identities = 192/496 (38%), Positives = 270/496 (54%), Gaps = 72/496 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K++ ++NT+ RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   
Sbjct: 63  KELWLHNTMSRKKELFKPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGY 122

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V+YVRN TD+DDKII RA +        D IS+ + +  ++F +D  +L CL P+ Q
Sbjct: 123 E--VSYVRNFTDVDDKIIARANELG-----EDPISL-SRRFCEEFKRDMEQLQCLDPSVQ 174

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  ++HIPQ++ LI+ I+ +G+AY+ + +I F     P YG  S RK+++ + G RV   
Sbjct: 175 PLVSDHIPQIVDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVD 234

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+PADF LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  FDIHGGG+DL+F
Sbjct: 235 TRKKHPADFALWKTAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVF 294

Query: 243 PHHENEIAQSCCADRIEKTANI--WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQSC A     ++NI  WIHNGF+ ++  KMSKS GNF TI ++++       
Sbjct: 295 PHHENEIAQSCAAC---DSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL------ 345

Query: 301 SWPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQT------ 340
            +    +RL ++ THYR PI+++               Q L + E LL +   T      
Sbjct: 346 -YHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESLLGEKDSTFGNDSV 404

Query: 341 -----------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
                            S S  ++ P  L+A+   L T++ I    K  +++ +   L  
Sbjct: 405 PSDTLTTINTFHSEFVASMSDDLLTPVTLAAMSEPLKTINDIIHTRKGKKQARREESLKA 464

Query: 384 IFNASAHILGI------------EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSA 428
           +      +L I            E  KE   K   +  E +   VQER    K K++  +
Sbjct: 465 LETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERS 524

Query: 429 DYIRKQLESKGFILED 444
           D IRK L S G  L D
Sbjct: 525 DAIRKDLASVGIALMD 540


>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 484

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/489 (39%), Positives = 268/489 (54%), Gaps = 65/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+  EF  I+P  +RMYVCG TVYD  H+G+AR M+VFDV+ R LR    E 
Sbjct: 2   LRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + I  +T++  +   +D   L  L P  +PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAHER------GENIQELTARYIEALHEDAEGLQILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  +I ++Q ++  G+AY+  N +I +D S    YG+ S +++DE + G RV    
Sbjct: 114 ATESMEAIIAMVQRLLEQGYAYQGENGDIYYDVSHFEGYGALSGKQLDELRAGERVQVSE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKPNEPAWDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A    K  N W+HNGF+ ++  KMSKS GNF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEAATGC-KFVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLE-------HYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTSKGII------------- 347
             V+R  +L +HYR P+++T Q+L  A+  +++     +    +GI              
Sbjct: 286 PEVLRYFILSSHYRSPLNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAEG 345

Query: 348 -DPAV---LSALYNDLNTVSAI-------QALHKLARESTKNH-----DLLPIFNASAHI 391
            DP V     A+ +D NT  A+        AL++   E  K+       LLP   A   +
Sbjct: 346 DDPFVQRFCEAMDDDFNTPEALALLNEIRHALNRAREEGDKDKVQYLARLLPSLGAILGL 405

Query: 392 LGIE----------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           L  E                V  E         IE+L+ +R    K K +++AD++R  L
Sbjct: 406 LTQEPEQFLRDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKDWAAADHLRDVL 465

Query: 436 ESKGFILED 444
           + +G  LED
Sbjct: 466 KKQGITLED 474


>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123356646|sp|Q12L98|SYC_SHEDO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 459

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 188/480 (39%), Positives = 265/480 (55%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T + T +  KD   L  + P  +P+
Sbjct: 61  -VNFQRNITDVDDKIIKRAAEN------NESCDALTERLTAEMHKDFDALNMVRPDFEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I ++Q ++  GHAY A + +++F  +S   YG  S + ID+ + G RV   +
Sbjct: 114 ATLHMPEIIEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDH 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 NKQNPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------KHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVL---SA 354
           A  +R  +L  HYR  ++++   L +A   L +          + +    D  V    SA
Sbjct: 286 AQTVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAFKDLDLTVTAAPADEYVTKFKSA 345

Query: 355 LYNDLNTVSAIQALHKLARE----STKNHDLLPIFNAS----AHILG-----IEVCKEHL 401
           + +D NT  A   L  + RE     T +         S    A +LG     IE   +  
Sbjct: 346 MNDDFNTPEAYSVLFDMVREINRLKTTDMGAASALGVSMKQLADVLGIVSVDIETFFKGS 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +  +A IE L+ ER      K +++AD  R +L   G +LED      G+  T WK+K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWAAADVARDRLNQLGVVLED------GENGTTWKKK 459


>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 474

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 192/492 (39%), Positives = 264/492 (53%), Gaps = 60/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ + P ++ MYVCGPTVYD +HIG+AR  +VFD+++R L+    E 
Sbjct: 3   LTLYNTLTRQKETFKPLKPGHVSMYVCGPTVYDSSHIGHARSAVVFDIVFRYLQESGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +          I I       +F +D   LA L PT +PR
Sbjct: 62  -VTYVRNFTDVDDKIINRANERDMDCQALSEIYI------DEFHRDMDALAVLRPTLEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I +   ++  GHAY  + ++ FD  S  +YG  S RK+++ + G RV     
Sbjct: 115 ATEFIKEIIEVTSKLVEKGHAYVVDGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVDSR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK   P EP WESPWG GRPGWHIECSAMS   LG+ FDIHGGG DLIFPH
Sbjct: 175 KKDPFDFALWKAKKPGEPAWESPWGEGRPGWHIECSAMSWSRLGETFDIHGGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS  A   ++    W+HNGF+N++  KMSKS  NF+T+ E+L+        +  
Sbjct: 235 HENEVAQSEAA-FGQQFVRYWMHNGFVNIDSEKMSKSLNNFLTVKEILD-------QFHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSA----- 354
             +RL +L  HYR P+DFT Q + EA   L +          +  G+ D   +S      
Sbjct: 287 EAVRLFLLSKHYRSPVDFTEQAMKEAASGLDRVYSCLQRILESVGGLDDDFQISGHWSRF 346

Query: 355 ---LYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAHI------LGI---- 394
              + +D NT  A+  L +  R+  +         D +    A A I      LG+    
Sbjct: 347 CACMDDDFNTAGALGILFEAVRDVNRLLDGDLTGDDQVRATEAGAAIVKMGGVLGMFQED 406

Query: 395 -----EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                E  KE   ++       ++ L+ +R    K K +++AD IR QL   G  +ED  
Sbjct: 407 PVAYFEGKKEQAAQDGGFDPAMVDDLIAKRSQARKDKDWNTADAIRDQLTEMGVAIED-- 464

Query: 447 NPDNGQRMTRWK 458
            PD     T WK
Sbjct: 465 TPDG----TIWK 472


>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|30316184|sp|Q9JXE6|SYC_NEIMB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 473

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 256/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 345

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 473

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 258/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 AFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L  + +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|304413758|ref|ZP_07395202.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283849|gb|EFL92243.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 506

 Score =  324 bits (831), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/486 (39%), Positives = 269/486 (55%), Gaps = 52/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ ID   I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 43  LKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVAFDVIVRYLRYL--DY 100

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA +       N+    +T +   +  +D   L  L P  +P+
Sbjct: 101 DLTYVRNITDIDDKIIKRAAEN------NETCQQLTERMMIEMYRDFDALNILRPNEEPQ 154

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I LI+ +I   HAY  A+ +++F   S PNYG  SR+ ++  + G RV    
Sbjct: 155 ATAHITEIIALIKKLIEGKHAYIAADGDVVFAVKSAPNYGLLSRQNLENLQAGARVAIAD 214

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWKR+ P +P W+SPWG GRPGWHIECSAM++  LG+ FDIHGGG DL+FP
Sbjct: 215 GKEDPMDFVLWKRALPGDPSWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGGGSDLLFP 274

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +   N W+H G + +E  KMSKS  NF TI +LL+        + 
Sbjct: 275 HHENEIAQSTCAHG-DPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLD-------HYD 326

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGI---IDPAVLS 353
           A  +R  ++  HYR  +D++ + L ++ I L +         +T+++       +     
Sbjct: 327 AETVRYFLMSAHYRSQLDYSEENLRQSRIALERLYIALRGTDETASAAAAGENFEKRFRD 386

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHD------LLPIFNASAHILGIEVCK-EH---- 400
           A+ +D NT  A   L  +ARE    K  D      L     + A +LG+   K EH    
Sbjct: 387 AMDDDFNTPEACAVLFDIAREVNRLKTEDNAAASGLAATLRSMAQVLGLLTQKPEHFLQA 446

Query: 401 -----LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                + K+  IA IE L+++R    + K +  AD  R QL      LED      G + 
Sbjct: 447 VNHSEIAKDTEIAKIEALIEQRNTARQQKNWVLADEARHQLNEMKITLED------GPQG 500

Query: 455 TRWKQK 460
           T W++K
Sbjct: 501 TTWRRK 506


>gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 587

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 256/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 118 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 172

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 173 YPLTYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEP 226

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 227 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 286

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 287 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 346

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 347 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 406

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 407 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 459

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 460 DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGL 519

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 520 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 577


>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 470

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 193/482 (40%), Positives = 265/482 (54%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NT+ RK  EF+ I+   I MYVCG TVYD  HIG+AR  + FD++ R LRY  G K
Sbjct: 15  LQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYLRYR-GYK 73

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII+RA +   S         +      +  KD   L  + P  +PR
Sbjct: 74  -VRYIRNITDIDDKIIKRAHERKVSA------KELAENFIVEMHKDFDALNIMRPDEEPR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP++I L+Q +I +G+AY A+N +++F   +   YG  S + ++E + G R+  + 
Sbjct: 127 ATETIPEIIALVQRLIDNGNAYVADNGDVMFAIDTFKQYGRLSGQNLEELEAGARIEIEK 186

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+  YLG+ FDIHGGG DLIFP
Sbjct: 187 TKRNPFDFVLWKMSKPGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLIFP 246

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    K  N W+H+G + +   KMSKS  NF TI ++LE        + 
Sbjct: 247 HHENEIAQSCCACH-SKYVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLE-------HYD 298

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVLSAL 355
           A  IR  +L   YR P+++T + L +A+  L++         P  +  +          +
Sbjct: 299 AETIRFFLLSAQYRSPLNYTQENLDKAKASLARLYTALRDVVPVKAEGEDEYTKRFKELM 358

Query: 356 YNDLNTVSAIQALHKLARESTKNH---------------DLLPIF--NASAHILGIEVCK 398
            +D NT  A+  L  LA+   K                  +L I   N S+ + G E   
Sbjct: 359 DDDFNTPGAMAVLFDLAKAVNKEEGETKAKLAGRLVELGSVLGILYQNPSSFLKGAESSD 418

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N  +S+ IE L+QER      K F +AD  R +L + G +LED      G   T W+
Sbjct: 419 ---NDEVSV-IEALIQERKDARARKDFKAADAARDKLTAMGIVLED------GPSGTTWR 468

Query: 459 QK 460
           +K
Sbjct: 469 RK 470


>gi|6899996|emb|CAB71305.1| cysteinyl tRNA synthetase [Clostridium sticklandii]
          Length = 443

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 187/464 (40%), Positives = 268/464 (57%), Gaps = 55/464 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY+F HIGNARP ++FD     + Y   E  VTYV+N TD+DDKII+RA +E 
Sbjct: 1   MYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYE--VTYVQNFTDVDDKIIKRANEEG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            S PI      +  K   ++ KD   L     T  PR T +I  +I  I+++I  G AYE
Sbjct: 59  IS-PIE-----VAEKYIAEYFKDADALGIKRATVHPRVTENIENIITFIEDLISKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
            N ++ F++ +   YG  S++ ++E  +G R+     KK+P DF LWK     E GW+SP
Sbjct: 113 LNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDEKKHPIDFALWKAKKEGEIGWQSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG GRPGWHIECS MS+ YLG   DIH GG DLIFPHHENEIAQS  A   ++ A  W+H
Sbjct: 173 WGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQS-EARSGKQFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N++ +KMSKS GNF T+ ++L   +F G+     VIR  +L  HYR P++F+ + +
Sbjct: 232 NGYINVDNQKMSKSLGNFFTVRDIL--SEFSGQ-----VIRFFLLSAHYRNPVNFSKELI 284

Query: 328 TEAEILLSKWPQT--------STSKGIIDPA---VLSALYN-----------DLNTVSAI 365
            +A+  + +   +        S +KG ++ +   ++SAL N           D+NT  AI
Sbjct: 285 LQAKAGMERLANSKERLVFTISHAKGQMNESELELVSALENHRDRFIEAMDDDINTADAI 344

Query: 366 QALHKLARES----TKNHDL------LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
             + +LAR S    T+N  L      L +FN    +L I +  E  + N +  IEKL+++
Sbjct: 345 SIIFELARFSNTNVTENSSLEWAEKNLSLFNELTGVLNI-IKAEDTDSNDNEQIEKLIKD 403

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K K F+ AD IR +L+S G  +ED +      + T+WK+
Sbjct: 404 RVEAKKNKDFALADAIRDELKSMGIEIEDTR------QGTKWKK 441


>gi|330878748|gb|EGH12897.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 460

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 256/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++         ++PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAVEPAGGEAFVERFTAAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE         T    L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETGVTAAAGLAARLKQLACVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K 
Sbjct: 406 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452


>gi|285018667|ref|YP_003376378.1| cysteinyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283473885|emb|CBA16387.1| probable cysteinyl-trna synthetase protein [Xanthomonas
           albilineans]
          Length = 466

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 191/486 (39%), Positives = 272/486 (55%), Gaps = 48/486 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           M  ++++YN L R++  F+ +DP +    YVCGPTVY++AHIGNAR  +VFDVL +LLR 
Sbjct: 1   MPMRLRLYNNLTRQLDAFEPLDPHAGPTFYVCGPTVYNYAHIGNARGPVVFDVLAKLLRR 60

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
                 + Y RNITD+DDKI   A+ +   +PI    S IT +    + +D   L    P
Sbjct: 61  R--YGRLRYARNITDVDDKINAAAQAQ--GVPI----SAITDRFAAIYRQDMAALGVAPP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             +P+AT HIPQ++ +IQ +I +GHAY A   ++F  +S  +YG  SRR  +E   G RV
Sbjct: 113 DIEPQATTHIPQIVAMIQRLIDNGHAYPAEGHVLFAVASFADYGKLSRRDPEELLAGARV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+D
Sbjct: 173 DVAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS CA      A  W+HNG L   G KMSKS GN  T++EL+       
Sbjct: 233 LQFPHHENEIAQSQCAHGGATFARFWLHNGMLTFSGAKMSKSLGNIETVHELIAKH---- 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLS 353
              P   +R A+L  HYR+P+D++   +T+++  L +   T       +++  I   V  
Sbjct: 289 ---PPEALRYALLSAHYRQPLDWSEALITQSKNTLDRLYGTLRDLSGYSAEPDIPAEVDI 345

Query: 354 ALYNDLNTVSAIQALHKLARES----TKNHDLLPIFNAS-AHILG--------------- 393
           AL +DLNT  A+  L  LA  +    +K   + P  +A  AH+                 
Sbjct: 346 ALDDDLNTPKALAELSALASRARTLLSKPEHIGPAEHAELAHVKANLLGAGLALGLLQQD 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             V  +  +     +I+ L+ ER    + + F+ AD IR+QL   G +LED        +
Sbjct: 406 PNVWFQGADNADDASIQALIDERSAAKQRRDFARADAIRQQLADTGIVLEDTP------Q 459

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 460 GIRWKR 465


>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 459

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 269/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G+R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGSRIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV+           
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVVFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 473

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 258/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 AFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L  + +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 456

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 183/463 (39%), Positives = 261/463 (56%), Gaps = 41/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LKIYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA++        ++I  +TS+      +D  RL  + P  +P+
Sbjct: 61  -VTYVRNITDIDDKIIKRAQEN------GESIQALTSRFITAMDEDAARLGVMRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M+ +I  +I  G AY A+N ++ +  SS   YG  S + +++ + G RV    
Sbjct: 114 ATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM + +LG  FDIHGGG DL FP
Sbjct: 174 YKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+HNGF+ ++  KMSKS GNF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAANGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A V+R  +L   YR P++++   L +A   L++    +  +G+  P              
Sbjct: 286 AEVVRFFILRAQYRSPLNYSDHHLDDARQALTRL--YTALRGLALPTFTIDWQQPQAARF 343

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK----------EHL 401
            +A+ +D NT  A   L +LA E  +   L       A    + + +          E  
Sbjct: 344 KAAMDDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESA 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +  IE+ +Q RL   + K F+ AD IRKQL  +G +LED
Sbjct: 404 QGRSADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLED 446


>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|229558718|sp|B0TC35|SYC_HELMI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 481

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 187/499 (37%), Positives = 262/499 (52%), Gaps = 65/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F       + MYVCGPT YD+ H+GNARP++VFD + R L +   E 
Sbjct: 3   LRVYNTLSREKETFVPHKAGRVGMYVCGPTTYDYIHLGNARPLVVFDTIRRYLEHVGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII RA++      I +    + ++  +++ +D   L     T  P+
Sbjct: 62  -VVYIQNFTDIDDKIIHRAKE------IGEDPIAMAARFVEEYYRDAKALNVRPATIHPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I +I  ++  GHAYE   ++ F   S  +YG  S R +++ + G RV     
Sbjct: 115 VSAHMAEIIAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIFPH
Sbjct: 175 KRHPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS         A  W+HNGF+ +   KMSKS GNF T+ E+L  K+F     P 
Sbjct: 235 HENEIAQSEACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFTLREIL--KRF-----PG 287

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
            VIR  +L THYR PIDF           +QRL  +  L+ +    S  +G   PA    
Sbjct: 288 DVIRFYLLSTHYRSPIDFDDSKLEAAQKGLQRLRTSRRLIEEALAASGKEGAERPAGQRE 347

Query: 351 ------------VLSALYNDLNTVSAIQALHKLAREST-----------KNHDLL----P 383
                          A+ +D NT  A+  L  LARE+            ++  LL     
Sbjct: 348 KLEEQWLAAKKGFREAMDDDFNTALALSMLFDLAREANTFLHGGFALTPEDRQLLLQVAE 407

Query: 384 IFNASAHILGIEV---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            F   A +LGI++        +  +   +  L+  R    K K +++AD IR  L+  G 
Sbjct: 408 TFEELAGVLGIDLAGGAAAADDNTVDGLMNLLIGIRAEARKKKDWATADRIRDGLKELGI 467

Query: 441 ILEDYKNPDNGQRMTRWKQ 459
           ++ED   P       RWK+
Sbjct: 468 VIED--TPQG----ARWKK 480


>gi|330897806|gb|EGH29225.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 460

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 263/478 (55%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE    +  D+             A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 473

 Score =  324 bits (830), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 257/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 AFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|109894912|sp|Q2Y7U5|SYC_NITMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 464

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 191/482 (39%), Positives = 269/482 (55%), Gaps = 53/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L R+  EF  + P  +++YVCG TVYD+ H+G+AR M+VFD++ R  R    + 
Sbjct: 2   LKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRANRFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        ++I  +T++  Q   +D   L    P+ +PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAQEN------KESIEALTARFIQAMEEDAAALGVEPPSWEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  MI +IQ ++    AY A+N ++ +     P YG  S + +DE + G RV    
Sbjct: 114 ATRHVEDMIAMIQVLVDKKLAYPASNGDVYYAVHRFPGYGKLSGKSLDELRAGERVIVDP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HK +P DF+LWK + P EP W+SPWG GRPGWHIECSAM  HYLG+ FDIHGGG DL FP
Sbjct: 174 HKNDPLDFVLWKAAKPGEPQWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ +   KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSEGA-HGHPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREILA-------HFQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDPAV-- 351
             V+R  +L  HYR P+++   +L +A   L +    +  KGI           DP    
Sbjct: 286 PEVVRFFILRAHYRSPLNYADMQLEDAGRALDR--LYTALKGIEVHDEVEIDWDDPYASR 343

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNHDLLP----IFNASAHILGI------EVCKEH 400
              A+ +D NT  A+  L  LA E  K    LP    +  A   +LG+      +  ++ 
Sbjct: 344 FREAMNDDFNTPEALAVLFDLATEVNKTR--LPRDIALMKALGGVLGLLQQDPWKYFQQA 401

Query: 401 LNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +++ + A   +E+L+Q+RL+    K +  AD IRK+L     ILED      G   T W
Sbjct: 402 DSEDPAFAPEKVEQLIQQRLVARANKDYREADRIRKELMEANIILED------GPHGTTW 455

Query: 458 KQ 459
           ++
Sbjct: 456 RR 457


>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 473

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 276/473 (58%), Gaps = 51/473 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF       I +YVCG TVYD+ HIG+AR ++ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII+RA +        ++IS +TS+      +D  +L CLAP   P+AT
Sbjct: 64  KYVRNITDIDDKIIKRANEN------GESISELTSRFIDAMNEDFAKLGCLAPDVAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
           ++I QM  +I N++  G AY +NN ++ F+      YG  S RK+++ + G   RV  + 
Sbjct: 118 DYIDQMQAMIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIE-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGI--------IDPAVL-- 352
             V+R  ++ +HYR P++++   L EA+  LS++  +  T + +        +D A++  
Sbjct: 290 PEVVRYFIVSSHYRSPVNYSDVALKEAKNTLSRFYHSFKTYQAVYGDHLIETLDEALVER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI--EVCKE 399
             +A+ +D NT  AI  L ++ +E       +N +   I+ A+     +ILG+  +   E
Sbjct: 350 FNAAMRDDFNTPEAIAVLFEINKELNRTVKEENAEQAAIYYATLRHLTNILGLVQQNVDE 409

Query: 400 HLNKNISI--------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            L  +I           IE L+Q+R    K K+F+ AD IR+ L  +G +LED
Sbjct: 410 FLKSDIGQEALGLSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLDQGVVLED 462


>gi|189183685|ref|YP_001937470.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|229470555|sp|B3CRX9|SYC_ORITI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189180456|dbj|BAG40236.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 478

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 193/488 (39%), Positives = 278/488 (56%), Gaps = 53/488 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL RK   F  ++  +++MYVCGPTVYD  HIGNAR ++V+D+LYR+L   YG + +
Sbjct: 5   IYNTLSRKKERFVPLNCKSVKMYVCGPTVYDIPHIGNARSVVVYDLLYRVLSLLYGRQNI 64

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA++      +  +I  +T + T +F +D + L C  PT +P+AT
Sbjct: 65  TYVRNITDIDDKIINRAKE------LKISIFKLTHETTIKFHEDMSYLGCCNPTIEPKAT 118

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           ++I  MI +I ++I  G+AY  ++  + F   +  +Y   SRR  D   + +R   +  K
Sbjct: 119 DNIDVMINIITSLIQTGNAYSTDDGHVYFAVKTFQDYNLLSRRTFDSMILNSRESSEPQK 178

Query: 186 KNPADFILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              ADF+LWK +      ++  ++SPWG+GRPGWHIECSAMS  +LG+ FDIHGGG DLI
Sbjct: 179 SYFADFVLWKPANADNEDIDAVFDSPWGKGRPGWHIECSAMSYKFLGENFDIHGGGADLI 238

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS CA    + A  W+HNGFL ++G KMSKS  NF+T+ +L +    G   
Sbjct: 239 FPHHTNEIAQSRCAFPESRHALYWVHNGFLTVKGEKMSKSLNNFVTVRDLQKQNINGA-- 296

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------KG- 345
                +RL  L THYR+P+DF  + L +A+ +++    T  S               KG 
Sbjct: 297 ----AVRLMFLSTHYRKPLDFNDKSLNDAKNIINYLYDTIDSVNGTAQQQDNIKAEFKGN 352

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLA---RESTKNHDLLPIFNA---SAHILGIEVCKE 399
                 +SAL +DLN+  AI  L  +A   R   ++ D L +  A   ++++LGI    +
Sbjct: 353 AFTVEFISALLDDLNSPKAIACLLNIAKQIRRQNQSEDKLALTQALLYASNLLGILHNYQ 412

Query: 400 HL--------NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            +        N N++   I+ L+ +R+   + K ++ AD IR QL S G  L      D 
Sbjct: 413 FIKDSNDVKDNSNVTPHEIDLLIAKRIQAKQDKDWNLADQIRSQLLSNGISL-----TDK 467

Query: 451 GQRMTRWK 458
               T WK
Sbjct: 468 ADGTTSWK 475


>gi|210608929|ref|ZP_03288066.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
 gi|210152846|gb|EEA83852.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
          Length = 476

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 192/479 (40%), Positives = 258/479 (53%), Gaps = 60/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 9   MKLYNTLSRRKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E   +  N+    I+ +   +  KD   +     T  P 
Sbjct: 68  -VNFVSNFTDVDDKIIKKAIEE--GVSANE----ISQRYIAECKKDMAGMNVKPATKHPL 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 121 ATEEICGMIEMIQELIDKGYAYEKNGTVYFRTRKFDEYGKLSHKNLDDLQSGGRSLLVSG 180

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG   DIH GG DL+
Sbjct: 181 EDEKEDPLDFVLWKPKKEGEPAWESPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 240

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 241 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFRTVREISE-------Q 292

Query: 302 WPAPVIRLAMLMTHYREPIDFT-----------------------VQRLTEAEILLSKWP 338
           +   V+R  ML  HYR P++F+                       ++  T AE +     
Sbjct: 293 YDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLTRIVTAVDNLKHLENATSAEAMTDVEK 352

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKN-----HDLLPIF 385
           +T            +A+ +D NT  AI ++ +L +        ES+K      HDL+   
Sbjct: 353 ETFEKTKEFVEGFETAMEDDFNTADAIASIFELVKFANTTATAESSKEYLKGLHDLIVKL 412

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              A +LG+ V KE   + ++  IEKL++ER    K K F  AD IR +L  KG ILED
Sbjct: 413 ---ADVLGLIVEKEE--ELLAEDIEKLIEERQAARKEKNFKRADEIRNELLEKGIILED 466


>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 550

 Score =  323 bits (829), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 200/499 (40%), Positives = 253/499 (50%), Gaps = 76/499 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K   F  I    + +YVCG TVYD  H+G+AR  +VFDVL R L Y   E 
Sbjct: 59  LKLYNTLNNKKEVFTPIREGRVGLYVCGITVYDVCHVGHARSAVVFDVLKRYLEYRGYE- 117

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY++N TD+DDKII RA  E  SI      S I ++      KD  RL  L PT  PR
Sbjct: 118 -VTYIKNFTDVDDKIIARANAEGVSI------SEIANRYIASHDKDMDRLGVLRPTVTPR 170

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI LI  +   G AY  +  + +     P YG  S RK+++   G R+    H
Sbjct: 171 ATEHIGEMIELISKLQKRGLAYAVDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDVNEH 230

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK S P EP W+SPWG GRPGWHIECS MS  YLG  FDIHGGG DL+FPH
Sbjct: 231 KNNPMDFALWKASKPNEPAWDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLVFPH 290

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  ANIWIHNGF+ +   KMSKS GN  TI E+L         + A
Sbjct: 291 HENEIAQSEGVTG-KPLANIWIHNGFVKINSEKMSKSLGNVFTIQEMLT-------RYHA 342

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------PQTST 342
            VIRL ML +HYR  +DF+ + L+EA   + ++                      P+T T
Sbjct: 343 EVIRLFMLQSHYRSAVDFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEASPISPETLT 402

Query: 343 SK---------GIIDPAVLSALYNDLNTVSAIQALHKLARE------------STKNHDL 381
            K         G+ D  V  A+ +DLNT  AI  L   AR+            S +   +
Sbjct: 403 GKTAELYAHVQGLPDRFV-EAMDDDLNTARAIGYLFDAARQINGFIRDAKMAKSKEGWKV 461

Query: 382 LPIFNASAHILGIEVCKEHLNKNISI----------------AIEKLVQERLILLKMKKF 425
           L +   S   LG  +     N ++                   IE L+ +R      K +
Sbjct: 462 LALAGKSIKDLGYVLGLFQENPDVYFLQDREREIRKRGLEPAEIELLIADRWAARNDKDW 521

Query: 426 SSADYIRKQLESKGFILED 444
             AD IR+ L  KG +L+D
Sbjct: 522 HKADEIRQLLTEKGIVLKD 540


>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
 gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
          Length = 494

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 158/332 (47%), Positives = 215/332 (64%), Gaps = 16/332 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I+NT   +   F  +  +++RMYVCG TVYD+ HIG+AR ++VFD+LYR LR+   + 
Sbjct: 3   ILIHNTKTNRKEPFTPLTDNHVRMYVCGITVYDYCHIGHARSVLVFDMLYRYLRHRRYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TDIDDKII+RA ++  S         ++ +  Q F +D   L    PT +P+
Sbjct: 62  -VTFVRNFTDIDDKIIKRAAEQQTSC------QELSQRFIQAFHEDMAALGTEPPTLEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+MI LI+ +I  G AY A  ++ F   +   YG  S R +DE + G R+     
Sbjct: 115 ATEHLPEMIALIEELIAKGLAYPAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVNEL 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S P EP WESPWG GRPGWHIECSAM   YLG+ FDIHGGG DL+FPH
Sbjct: 175 KEDPLDFVLWKGSKPEEPAWESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  AN WIH+GF+ ++  KM+KS GNF+TI ++L       + +PA
Sbjct: 235 HENEIAQSEGATG-KPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDVL-------KQYPA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
            V+RL +  THYR P+D++   + +AE  LS+
Sbjct: 287 EVLRLLLFSTHYRNPVDYSEAAMADAETALSR 318


>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|109894909|sp|Q2RFM3|SYC_MOOTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 476

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 194/496 (39%), Positives = 269/496 (54%), Gaps = 66/496 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL  +  EF  ++P  +RMYVCGPT Y++ H+GNARPM+VFD L R L Y   +  V
Sbjct: 3   LYNTLTGRKEEFTPVEPGRVRMYVCGPTTYNYIHLGNARPMVVFDTLRRYLEYRNYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N TDIDDK+I RAR+EH + P+     +I  +  ++F KD   L     T  PR +
Sbjct: 61  LYVQNFTDIDDKVINRAREEHQA-PL-----VIAERYIEEFFKDADALNVKRATLYPRVS 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HI  +I  I  ++  G AY A+ ++ F+    P YG  S+R   E + G RV     K+
Sbjct: 115 QHIDAIIAAIATLVERGFAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARVEVNTSKR 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF LWK + P EP WESPWG GRPGWHIECS M+  YLG  FDIHGGG DLIFPHHE
Sbjct: 175 NPLDFALWKAACPGEPSWESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGADLIFPHHE 234

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQ+         A  W+HNGF+ +   KMSKS GNF  + ++L  K+F       P+
Sbjct: 235 NEIAQAEAQTGC-TFARFWLHNGFITVNQEKMSKSKGNFFLVRDIL--KRF------RPL 285

Query: 307 -IRLAMLMTHYREPIDFT----------VQRLTEAEILL--SKWPQTSTSKGIIDPA--- 350
            +RL +L THYR PIDF           ++RL     LL  ++   T T      PA   
Sbjct: 286 AVRLYLLATHYRSPIDFDDAGLLAAERGLERLENTRRLLGEARCQLTGTGAETTVPARTS 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNAS---- 388
                        +SA+ +D NT  A+ AL+ LARE       T   D   +  A+    
Sbjct: 346 ALAGRAEELRQEFISAMDDDFNTARALAALYDLAREINSYLNGTTTIDPAALRTAAITFE 405

Query: 389 ---AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                +LG+  +  ++  ++ +S  ++ ++Q R    + + +++AD IR +L+  G +LE
Sbjct: 406 QLGGEVLGLFGQARQQVDDELLSGLMDLILQVRQEARQRRDWATADTIRDRLKELGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        R  RWK+
Sbjct: 466 DTP------RGPRWKR 475


>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 472

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 189/489 (38%), Positives = 271/489 (55%), Gaps = 56/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL ++  EF+ I+P  +RMYVCGPTVY+  HIGNARP IVFD + R       E 
Sbjct: 2   IKIYNTLTKRKEEFKPIEPHKVRMYVCGPTVYNLIHIGNARPYIVFDTVRRYFESVGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKII++A +E  S       + + ++  ++ +KD   L     TH PR
Sbjct: 61  -VNYVQNFTDVDDKIIKKANEEGRST------NEVVTQYIEETLKDVNNLNVTPATHHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG--TRVPEK 182
            T  + ++I +I+ +I  G+AYE N  + FDT++   YG  S++ ++E + G   RV   
Sbjct: 114 VTEEMDRIIEMIKELIEKGYAYEINGTVYFDTAAFEQYGKLSKKVLEELEAGRSERVALT 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKN  DF+LWK     EP WESPW  GRPGWHIECSAM+  YLG   DIH GG DL+F
Sbjct: 174 EEKKNHMDFVLWKPKKEGEPYWESPWSNGRPGWHIECSAMAKRYLGDTIDIHAGGEDLVF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA+  E  A+ W+HN FLN++ +KMSKS GNF T+ ++       G  +
Sbjct: 234 PHHENEIAQSECANGKE-FAHYWMHNAFLNIDNKKMSKSLGNFKTLRDV-------GEMY 285

Query: 303 PAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP--A 350
              V+R  ML  HYR P++F          +++R+  A+  LS   + S    + +   A
Sbjct: 286 GYDVVRFFMLNAHYRSPLNFSAELIESAKNSLERIKNAKATLSFALEHSQIADLTEEEKA 345

Query: 351 VLSAL-----------YNDLNTVSAIQALHKL-------ARESTKN---HDLLPIFNASA 389
           +L  L            +D NT  AI  + +L       A+E         +L +FN   
Sbjct: 346 LLKELDDFKARFHEHMEDDFNTADAISIIFELVKFANTYAKEGASQPFVEAVLKLFNELT 405

Query: 390 HILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ILG+   ++  N++      I++ +++R    K + F+ AD IR  L+ +G ++ED + 
Sbjct: 406 DILGLIYDRKGNNEDGLSDEEIKEYIEKRTAAKKARDFAEADRIRDFLKDQGVLIEDTR- 464

Query: 448 PDNGQRMTR 456
              G R  R
Sbjct: 465 --EGVRFKR 471


>gi|225631085|ref|ZP_03787816.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591218|gb|EEH12369.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 350

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 164/337 (48%), Positives = 222/337 (65%), Gaps = 18/337 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F   D  +++MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFTPTDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFRLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  IT+   + F  D   + C  PTH+P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKEPTHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  WIHNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAGSMFAKYWIHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
                VIR A+L THYR+P+D+T   +++A+  L+K+
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKF 324


>gi|166031083|ref|ZP_02233912.1| hypothetical protein DORFOR_00765 [Dorea formicigenerans ATCC
           27755]
 gi|166028930|gb|EDR47687.1| hypothetical protein DORFOR_00765 [Dorea formicigenerans ATCC
           27755]
          Length = 468

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 187/476 (39%), Positives = 256/476 (53%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ +K  EF  ++   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTMSKKKEEFIPLEEGKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E  +         I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIAKANEEGVTA------EEISQRYIEECKKDMAGMNVKPATTNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI LIQ ++  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATQEIDGMIQLIQTLMDKGYAYEKNGTVYYRTRQFKEYGKLSHKNLDDLRSGERSLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W+SPW  GRPGWH ECS MS  YLG+  DIH GG DL+
Sbjct: 173 ADEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHTECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  +  AN W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANG-KTFANYWMHNAFLNIDNRKMSKSLGNFRTVREISE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------------WPQTSTSK 344
           +   V+R  ML  HYR P++F+ + +  A+  L +                  P T+   
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKSSLERIVNAVDNLNFLIKNAKDEPMTAEEA 344

Query: 345 GIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
            +         A   A+ +D NT  A+ A+ +L R S  N D          +  +    
Sbjct: 345 ELFAQTDSFVKAFEDAMDDDFNTADAVAAIFELVRYSNTNADAEKTKEYLGKIKDLIVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+ V K+   + ++  IEKL++ER    K K F+ AD IR +L  KG IL+D
Sbjct: 405 ADVLGLIVEKKE--EILAEDIEKLIEERQAARKAKDFARADAIRDELLEKGIILKD 458


>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166200150|sp|A6SZV1|SYC_JANMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 464

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 190/469 (40%), Positives = 267/469 (56%), Gaps = 48/469 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  I+P  +RMYVCG TVYD+ HIG+AR M+VFD++ R LR    E 
Sbjct: 4   LKIYNTLAREKQPFTPIEPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        ++IS +T +      +D   L    P H+PR
Sbjct: 63  -VNYVRNITDIDDKIIKRAAEN------GESISALTQRFIDAMDEDAAALGVQKPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN++PQM+ LI+ +  +G AY++++ ++ +     P YG  S + +D+ + G RV    
Sbjct: 116 ATNYVPQMLGLIEALERNGLAYKSSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNT 175

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK S   EP    W S WG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 176 GKRDPLDFVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A +     N W+HNGF+ ++  KMSKS GNF TI E+L        
Sbjct: 236 QFPHHENEIAQSEGASQ-HTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLA------- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPAVLS------ 353
            + + V+R  +L  HYR  ++++   L +A   L++    +  KG+  D A L       
Sbjct: 288 KYDSEVVRFFILRAHYRSQLNYSDAHLDDARNALTR--MYTALKGVAPDQAALDMTEAHA 345

Query: 354 -----ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
                A+ +D NT  A+  L +LA E   TK+  L       A I+G+     ++ L+  
Sbjct: 346 LRFAEAMNDDFNTPLAVAVLFELANEINKTKSPALARQLVGLAGIVGLLQRPAQQFLHAG 405

Query: 405 IS---------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ++           +E+ ++ R+   K K F+ AD IR +L  KG ILED
Sbjct: 406 LANGEDGEMETFVVEQ-IEARVNAKKAKNFAEADRIRAELLEKGIILED 453


>gi|256827720|ref|YP_003151679.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583863|gb|ACU94997.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 499

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 194/510 (38%), Positives = 269/510 (52%), Gaps = 93/510 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNT  RK  +F+ I+   +RMYVCGPTVY++ HIGNAR  + FD++ R L +   + 
Sbjct: 2   IRIYNTQTRKKEDFKTIEVGRVRMYVCGPTVYNYIHIGNARTFVSFDIVRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII+RA +E       DA  I   K T  F++D   +  L P  +PR
Sbjct: 61  -VTFVQNVTDVDDKIIKRAGEEE-----CDAAEI-ARKYTDAFIEDMHAMGVLDPDKRPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP+MI L+Q +I  GHAYEA  ++ F   S P YG  S R IDE + G R     H
Sbjct: 114 ATEEIPEMIELVQRLIDTGHAYEAAGDVYFSVRSFPAYGHLSHRDIDELESGHRDLRASH 173

Query: 185 -------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
                  K++P DF +WK + P EP W+SPWG+GRPGWHIECSAMS  YLG  FD+HGGG
Sbjct: 174 VEGIGDRKRDPLDFAIWKAAKPGEPSWKSPWGQGRPGWHIECSAMSRKYLGLPFDVHGGG 233

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENE AQS  A   E   N W+H+G L +   KMSKS GNF+ + ++L  K  
Sbjct: 234 ADLIFPHHENETAQSEAA-WGETFTNYWMHSGMLQINAEKMSKSLGNFLLLRDVL--KSV 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----------------------------- 328
             RS     +R+ ML THYR P+DF+ +RLT                             
Sbjct: 291 NPRS-----LRMLMLQTHYRSPLDFSEERLTEAAAALARIEALVARLDWAITNAADIPSP 345

Query: 329 -EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA-------RESTKNHD 380
            +A+ LL++  QT           + A+ +D NT  A+ A+  L         ++T +  
Sbjct: 346 LKAKELLAQVQQTRNE-------FIYAMDDDFNTAGALGAIFTLVGDLNTQLGDATVSRS 398

Query: 381 LLPIFNASAH-------ILGIEVCKE-------------------HLNKNISIAIEKLVQ 414
            +P+   +         + GIEV ++                       + S A++ L+ 
Sbjct: 399 DIPVLRQARESIVELMGVFGIEVVQQPSESGYPAQVVDLAAELAGFAGTSPSDAVDALLG 458

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILED 444
            R    + K F+ AD +R ++   GF +ED
Sbjct: 459 ARAAARQAKNFALADAVRDRMSDLGFTIED 488


>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 459

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 267/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSL--DY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 60  DLTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV            
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVAFGGENFVATFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +S+AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMGIVLED------GANGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica ST-640]
 gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
           (cysrs) [Neisseria lactamica 020-06]
          Length = 473

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 189/478 (39%), Positives = 256/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           +YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   LYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG+GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 345

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI 394
           DP               A+ +D +TV A+  L +LA E   T N  L     A   I+G+
Sbjct: 346 DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGL 405

Query: 395 --EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L          +  IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|226309785|ref|YP_002769679.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254765181|sp|C0ZIF7|SYC_BREBN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226092733|dbj|BAH41175.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 468

 Score =  323 bits (828), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 182/491 (37%), Positives = 271/491 (55%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT+ R+   F  ++P  ++MYVCGPTVY++ HIGNARP IVFD L R L+Y   E 
Sbjct: 3   IQLTNTMTRRKEPFHTLEPGKVKMYVCGPTVYNYIHIGNARPAIVFDTLRRYLKYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+NITD+DDK+I  A QE  ++        +  + T  +  D   L    P  QPR
Sbjct: 62  -VTFVQNITDVDDKLIRVANQEGVTV------KEVADRYTDAYNADLKSLNVSPPDIQPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
               IP++I  +Q +I  G AYE+  ++ F T     YG  S + +D+ + G RV     
Sbjct: 115 VMQTIPEIIEFVQGLIEKGFAYESEGDVYFRTGRFQEYGKLSHQPLDDLQAGARVEINEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  W+SPWG GRPGWHIECSAM+  +LG+  DIH GG DL+FPH
Sbjct: 175 KEHPLDFVLWKAAKTGEVTWDSPWGEGRPGWHIECSAMALKFLGEEIDIHAGGTDLVFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS C   ++   A  W+HNG LN++  KMSKS GNF+   +L  ++KFGG+   
Sbjct: 235 HENEIAQSECFTGKV--FARYWLHNGMLNIDNEKMSKSLGNFLLARDL--SEKFGGQ--- 287

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSK--------- 344
             +IR  ML  HYR PI+F+          + R+T A   LS    T+ ++         
Sbjct: 288 --LIRFFMLQGHYRNPINFSEELIEQAANGLDRITTAYTNLSHRLDTARAEEPNDQAQEQ 345

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARES-----------TKNHDLLPIFNASA 389
               G +    ++ + +D+NT +AI  +  + +E+           T+    + +     
Sbjct: 346 ARIIGELRERFIAEMDDDINTANAITVIFDVVKEANLYLRHQNVGETEVRAYMDLLVELT 405

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+++ +E   + +   I+ L++ER    K + F+ +D IR  L +KG +LED   P 
Sbjct: 406 EVLGLDIAEEQ--ELLDSEIDALIEERTEARKARNFARSDEIRDLLAAKGIVLED--TPQ 461

Query: 450 NGQRMTRWKQK 460
                 RW++K
Sbjct: 462 G----VRWRRK 468


>gi|126697618|ref|YP_001086515.1| cysteinyl-tRNA synthetase [Clostridium difficile 630]
 gi|122974209|sp|Q18CD5|SYC_CLOD6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 468

 Score =  323 bits (828), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 183/476 (38%), Positives = 263/476 (55%), Gaps = 57/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 4   VKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E  S P       + +K  +++  D   L     T  P+
Sbjct: 63  -VTYVQNFTDVDDKIINRSHEEGIS-P-----EEVAAKYIKEYFVDCDGLGIKRATVHPQ 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 116 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 176 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 235

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    R  KT +  W+HNG++N+   KMSKS GNF T+ ++        + + 
Sbjct: 236 HENEIAQSEA--RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYD 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV------- 351
             ++R  ML  HYR P++F+ + L +A+  L +   T      T   +++  +       
Sbjct: 287 LEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVEL 346

Query: 352 -----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                      + A+ +D+NT  A+  + +LA+    N D           L  FN    
Sbjct: 347 VKELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTG 406

Query: 391 ILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L I   K+   L+K+    IE+L+Q+R    K K+F  AD IR+QL   G +LED
Sbjct: 407 VLNIVNKKKDTVLDKD----IEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLED 458


>gi|226328546|ref|ZP_03804064.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
 gi|225203279|gb|EEG85633.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
          Length = 463

 Score =  323 bits (828), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 266/482 (55%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 61  -VNYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNIARPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIELTEALIKLGHAYVADNGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVAN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNSKELGHHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +   +                +   + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDENAQPVGGEAFEAQFIDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  LARE  +         + L  +    A +LG +E   EH  ++ 
Sbjct: 346 MNDDFNTPEAYSVLFDLAREVNRLKAVDMNAANGLAAVLRKLAKVLGLLEQEPEHFLQSG 405

Query: 406 SIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + A        IE L+Q+R    K K +++AD  R  L + G +LED      G + T W
Sbjct: 406 AKADDASEVEKIELLIQQRNDARKNKDWAAADVARDALTAMGIVLED------GPQGTVW 459

Query: 458 KQ 459
           ++
Sbjct: 460 RR 461


>gi|330952785|gb|EGH53045.1| cysteinyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 460

 Score =  323 bits (828), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 264/478 (55%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIGAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPLAEPAGGEAFVERFSAAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE    +  D+             A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              ++ A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVNAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
 gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
 gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
          Length = 467

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 183/476 (38%), Positives = 263/476 (55%), Gaps = 57/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 3   VKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E  S P       + +K  +++  D   L     T  P+
Sbjct: 62  -VTYVQNFTDVDDKIINRSHEEGIS-P-----EEVAAKYIKEYFVDCDGLGIKRATVHPQ 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 115 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 175 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    R  KT +  W+HNG++N+   KMSKS GNF T+ ++        + + 
Sbjct: 235 HENEIAQSEA--RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV------- 351
             ++R  ML  HYR P++F+ + L +A+  L +   T      T   +++  +       
Sbjct: 286 LEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVEL 345

Query: 352 -----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                      + A+ +D+NT  A+  + +LA+    N D           L  FN    
Sbjct: 346 VKELDGFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTG 405

Query: 391 ILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L I   K+   L+K+    IE+L+Q+R    K K+F  AD IR+QL   G +LED
Sbjct: 406 VLNIVNKKKDTVLDKD----IEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLED 457


>gi|237803609|ref|ZP_04591194.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331025591|gb|EGI05647.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 460

 Score =  323 bits (827), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDTLTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        +  PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALRGLPVAAPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVPAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 699

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 257/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 284

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 285 YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 338

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 339 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 398

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 399 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 458

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 459 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 518

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T       
Sbjct: 519 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 571

Query: 341 --STSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
               S+ + D      +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 572 EFDLSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 631

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 632 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILED 689


>gi|225468582|ref|XP_002263803.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
 gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 187/503 (37%), Positives = 267/503 (53%), Gaps = 81/503 (16%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNT+ ++   F+ +    + MYVCG T YD +H+G+AR  + FDVLYR L++   E
Sbjct: 6   ELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGYE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRN TD+DDKII RA +      + +    ++S+  Q+++ D T L CL PT QP
Sbjct: 66  --VTYVRNFTDVDDKIIRRANE------LGENPLTLSSRFCQEYLDDMTDLQCLTPTQQP 117

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK+++ + G RV    
Sbjct: 118 RVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDS 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   FDIHGGG+DLIFP
Sbjct: 178 RKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSC A + E   + W+HNG +     KMSKS GNF TI ++ +        + 
Sbjct: 238 HHENEIAQSCAACQ-ESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL-------YH 289

Query: 304 APVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSKGIIDP 349
              +R  +L THYR P+++++              Q L + E  LS + + +     I P
Sbjct: 290 PLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCITP 349

Query: 350 AV---LSALYNDLNT---------------------------------------VSAIQA 367
           A    +S L  D  T                                       +SA+Q+
Sbjct: 350 AAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQS 409

Query: 368 LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLK 421
           L +L +E      +L + +  A+    EV ++   K +  A      +  L++ER +  K
Sbjct: 410 LTELEKEVKGVLSVLGLLSTLAY---SEVLQQLKGKALRRAGMIEDDVLHLIEERALARK 466

Query: 422 MKKFSSADYIRKQLESKGFILED 444
            K FS  D IR  L SKG  L D
Sbjct: 467 NKNFSRGDQIRADLASKGIALMD 489


>gi|66044980|ref|YP_234821.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75502675|sp|Q4ZVN9|SYC_PSEU2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|63255687|gb|AAY36783.1| Cysteinyl-tRNA synthetase, class Ia [Pseudomonas syringae pv.
           syringae B728a]
          Length = 460

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 180/478 (37%), Positives = 264/478 (55%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIEAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE    +  D+             A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR ++ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDRITAMGVLLED------GKGGTTWR 457


>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 463

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 183/474 (38%), Positives = 264/474 (55%), Gaps = 56/474 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L R+   F+ I    + MYVCG TVYD  H+G+AR M+VFDV+ R LR      
Sbjct: 2   LKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRAL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I  +T +   +  +D   L  L P  +P+
Sbjct: 60  NVTYVRNITDIDDKIIKRAAEN------GETIQALTERFIAEMHQDADALGVLRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +P+++ +++ +I  G AY+A+N ++ +D S    YG  S R++D+ + G R+    
Sbjct: 114 ATESMPEILAMVETLIGKGLAYKADNGDVYYDVSKFEAYGKLSGRQVDDLRAGERIAVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP WESPWG GRPGWHIECSAMS+H LG+ FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKEGEPAWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   + + N W+HNGF+ ++  KMSKS GNF T+ E+L         +P
Sbjct: 234 HHENEIAQSEGAHDCQ-SVNYWMHNGFVRIDDEKMSKSLGNFFTVREVLA-------QYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
           A  +R  +L +HYR P+++   +L +A+  L+++    TS   ++P              
Sbjct: 286 AEAVRYFILSSHYRSPLNYAEDQLEQAKAALTRF---YTSLRDVEPQPELNWQDDKEFGS 342

Query: 351 -VLSALYNDLNTVSAI-------QALHKLARESTKNH------------DLLPIFNASAH 390
               A+ +D NT  A+       QAL+K    +  +             D+L +F   A 
Sbjct: 343 RFAEAMDDDFNTALALSVMADVRQALNKALENNEADLAAYLAGLLLSFGDVLGLFQQDAE 402

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +    E  + +   AI+ L+ ER      K +S AD IR QL   G ++ED
Sbjct: 403 TFLVGDMAEDSDAD---AIDALIVERNQARADKNWSRADDIRDQLSEMGIVIED 453


>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 473

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 258/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGDLTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T       
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
               S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 346 EFDLSENANDYTSRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDANLAGCLKALGGIIGL 405

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 473

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 257/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T       
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 341 --STSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
               S+ + D      +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 EFDLSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 405

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|302188937|ref|ZP_07265610.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 460

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 180/478 (37%), Positives = 261/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI +++E        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVVE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + + A          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEAAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE         T    L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
           30120]
 gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
           30120]
          Length = 462

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 189/483 (39%), Positives = 268/483 (55%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TDIDDKII+RA +       N+++  +T++   +  KD   L  L P  +PR
Sbjct: 61  -VNYVRNVTDIDDKIIKRAAEN------NESVEELTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L +++I  GHAY A+N +++F+  + P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPSYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKG--IIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +         +++T  G  I       A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSATPAGGEIYKSRFCEA 345

Query: 355 LYNDLNTVSAIQALHKLARE----STKNHDLLPIFNAS----AHILG---------IEVC 397
           + +D NT  A  AL  +ARE     T+N D      A     A +LG         ++  
Sbjct: 346 MNDDFNTPEAYSALFDMARELNRLKTENMDAANGMAAQLRELAKVLGLLEQDPETFLQGG 405

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +  +      IE L+++R    + K ++ AD  R  L + G +LED          T W
Sbjct: 406 AQSEDDAEVAKIEALIKQRNDARQSKDWALADQARDALTAMGIVLED------SSAGTTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|307579311|gb|ADN63280.1| cysteinyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 442

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 181/449 (40%), Positives = 251/449 (55%), Gaps = 51/449 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG   + Y RNITD+DDKI   A+++ 
Sbjct: 1   MYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG--ALRYARNITDVDDKINTAAQEQ- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +PI    S IT +    + +D  +L    P  +P AT H+PQ+I +I+ +I   HAY 
Sbjct: 58  -GVPI----SAITERFCAAYREDMKKLGVEPPDIEPEATAHMPQIIAMIEQLIERQHAYV 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           A   ++F  +S  +YG  SRR  +E   G RV    +K++P+DF+LWK S+   PGW+SP
Sbjct: 113 AMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIAPYKRDPSDFVLWKPSSDQLPGWDSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WGRGRPGWHIECSAM++ +LG+  DIH GG+DL FPHHENEIAQS CA      A +W+H
Sbjct: 173 WGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFPHHENEIAQSRCAHGSSTFARVWMH 232

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF----- 322
           NG LN EG KMSKS GN  T++EL+          P   +R A+L  HYR+P+D+     
Sbjct: 233 NGMLNFEGAKMSKSLGNIETVHELVAKH-------PPEALRYALLSAHYRKPLDWSEALI 285

Query: 323 -----TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES-- 375
                T+ RL      L+ +P    ++ II   + +AL +DLNT  A+  L  LA E+  
Sbjct: 286 AQSVRTLNRLYGTLRDLAAYP----ARAIIPGNIEAALDDDLNTPQALAELATLANEARI 341

Query: 376 ----TKNHDLLPIFNASAHILGIEVC----------------KEHLNKNISIAIEKLVQE 415
               T +H    +  A   +    +                  +  N++    I+ L+  
Sbjct: 342 QLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPEAWFSQGTNESDETHIQALIDA 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILED 444
           R    + + F  AD IR QL ++G +LED
Sbjct: 402 RGAAKQARDFVRADAIRAQLAAEGIVLED 430


>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|34222758|sp|Q9JWJ3|SYC_NEIMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 699

 Score =  323 bits (827), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 257/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 284

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 285 YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 338

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 339 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 398

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 399 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQF 458

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 459 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 518

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T       
Sbjct: 519 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 571

Query: 341 --STSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
               S+ + D      +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 572 EFDLSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 631

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 632 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 689


>gi|71736729|ref|YP_273919.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|109894921|sp|Q48L06|SYC_PSE14 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71557282|gb|AAZ36493.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 460

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE         T    L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 459

 Score =  322 bits (826), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 268/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV+           
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVVFGGENFAETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAVRLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GPNGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 459

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 267/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV+           
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGADQSAVVFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+++R      K + +AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSNDDEVAKIEALIKQRNEARAAKDWPAADAARNELTAMGIVLED------GPNGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|81336945|sp|Q4QPG7|SYC_HAEI8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 459

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 269/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV+           
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVVFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE        + K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEALIKQRNEARAAKDWATADAARNELIAMGIVLED------GPNGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 483

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 189/477 (39%), Positives = 255/477 (53%), Gaps = 58/477 (12%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC-- 65
           YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C  
Sbjct: 15  YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECGY 69

Query: 66  -VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+
Sbjct: 70  PLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPK 123

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV    
Sbjct: 124 ATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDG 183

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL FP
Sbjct: 184 FKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFP 243

Query: 244 HHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF TI
Sbjct: 244 HHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTI 303

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
            E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    D
Sbjct: 304 REVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD 356

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI- 394
           P               A+ +D +TV A+  L +LA E   T N  L     A   I+G+ 
Sbjct: 357 PMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLL 416

Query: 395 -EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                E L          +  I+ L+  R      K ++ +D IR  L     ILED
Sbjct: 417 QRDPTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILED 473


>gi|294338858|emb|CAZ87192.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Thiomonas sp. 3As]
          Length = 460

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 190/463 (41%), Positives = 264/463 (57%), Gaps = 40/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R    F  I+P ++RMYVCG TVYD+ HIG+AR M+VFD+L R L+   G +
Sbjct: 4   LHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQ-GLR 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA+         + I  +T +      +D   L    PTH+PR
Sbjct: 63  -VTYVRNITDIDDKIIRRAQDN------GETIRALTDRFIAAMHEDADALGVERPTHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ LI  +   G AY ++  ++ F   + P YG  S + +DE + G RV    
Sbjct: 116 ATDYVPQMLDLIGKLKTRGLAYRDSAGDVNFHVRAFPGYGKLSGKSLDELRAGERVEVDT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W S  G GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  AN+W+HNGF+ ++G KMSKS GNF TI ++L+       
Sbjct: 236 QFPHHENEIAQSEGASG-KPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDILQHVD---- 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
              A  +RL ++  HYR P++++ + L +A   L++   T+       PA L        
Sbjct: 291 ---AETVRLFIVRAHYRSPLNYSDEHLQDAHAALTRL-YTALDPFAELPARLDWSHPRAQ 346

Query: 353 ---SALYNDLNTVSAIQALHKLARESTKNHD----LLPIFNASAHILGIEVCKEHLNKNI 405
              +A+ +DLNT  A+  L +LA E  K  D     L         L  +  +E L    
Sbjct: 347 AFAAAMNDDLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKA 406

Query: 406 SIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +      +E+LVQ R+   + + F+ AD IR +L +KG +LED
Sbjct: 407 AAVDAAWVEQLVQARIAAKQARNFAEADRIRAELSAKGIVLED 449


>gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 699

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 257/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 284

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 285 YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 338

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 339 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 398

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 399 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 458

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 459 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 518

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 519 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 571

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 572 EFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 631

Query: 395 --EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 E L    +        IE L+  R      K ++ +D IR  L     ILED
Sbjct: 632 LQRDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 689


>gi|254804107|ref|YP_003082328.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 475

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 261/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 6   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 60

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 61  YPLTYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 115 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 175 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 235 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 294

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----ST 342
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T     + 
Sbjct: 295 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 347

Query: 343 SKGIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             G+ + A        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 348 EFGLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 407

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   I+ L+  R      K ++ +D IR  L     ILED
Sbjct: 408 LQRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILED 465


>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Clostridium difficile]
          Length = 465

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 183/476 (38%), Positives = 263/476 (55%), Gaps = 57/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 1   MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E  S P       + +K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIINRSHEEGIS-P-----EEVAAKYIKEYFVDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    R  KT +  W+HNG++N+   KMSKS GNF T+ ++        + + 
Sbjct: 233 HENEIAQSEA--RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYD 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV------- 351
             ++R  ML  HYR P++F+ + L +A+  L +   T      T   +++  +       
Sbjct: 284 LEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVEL 343

Query: 352 -----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                      + A+ +D+NT  A+  + +LA+    N D           L  FN    
Sbjct: 344 VKELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTG 403

Query: 391 ILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L I   K+   L+K+    IE+L+Q+R    K K+F  AD IR+QL   G +LED
Sbjct: 404 VLNIVNKKKDTVLDKD----IEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLED 455


>gi|253581402|ref|ZP_04858628.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836766|gb|EES65300.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 473

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 192/483 (39%), Positives = 274/483 (56%), Gaps = 57/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL  KI EF+ +    + MYVCGPTVY++ HIGNARP I FD + R   Y  G K
Sbjct: 2   IKIYNTLSGKIDEFKPVKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQP 123
            V YV+N TD+DDK+I RA +E  S+        I  K  + + +DT+++    A   +P
Sbjct: 61  -VKYVQNFTDVDDKMIRRANEEGVSLKD------IAEKYIKAYFEDTSKVNLKEAGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT HI  MI +IQN+I  G+AYEA  ++ F+     + YG+ S++ +++ K G R+   
Sbjct: 114 KATEHIGDMIEIIQNLIEKGYAYEAEGDVYFNVEKYKDGYGALSKQNVEDLKSGARIEVA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK +   EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 174 DIKKSPVDFALWKAAKEGEPSWDSPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+   E  A  W+HNG++N+ G KMSKS G F+ + ++LE  +F GR  
Sbjct: 234 PHHENEIAQSKCSCGGE-FARYWMHNGYININGEKMSKS-GTFMLLRQVLE--QFEGR-- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPAVL 352
              VIRL +L  HYR+P+DF+   L +A+  L +               T +G  D A L
Sbjct: 288 ---VIRLFILGAHYRKPMDFSNYELNQAKSSLERIENALLRAKDALAADTKEGGADCAEL 344

Query: 353 S------------ALYNDLNTVSAIQALHKLARE----------STKNHDLLP-----IF 385
           +            A+ +D NT   + A+ +L +E          S K  + +      + 
Sbjct: 345 AEVLKSSSEKFVTAMDDDFNTAQGLGAIFELIKELNKALEGDKLSAKGKETVKETVDYVV 404

Query: 386 NASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N    +LG+ +  ++   N+ S  +E +++ R      K ++ +D IR +L   G  ++D
Sbjct: 405 NIMQEVLGVILKLDNEVGNLTSELVEFILEMRREARADKNWAMSDKIRDRLAEMGIKIKD 464

Query: 445 YKN 447
            K+
Sbjct: 465 GKD 467


>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 461

 Score =  322 bits (826), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLKRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY  AN +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIAREHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE         T  + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDMTAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 473

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 190/484 (39%), Positives = 256/484 (52%), Gaps = 66/484 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +
Sbjct: 2   LTIYNTLTRKKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----E 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  
Sbjct: 57  CGYPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDI 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +P+AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV 
Sbjct: 111 EPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVE 170

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL
Sbjct: 171 VDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADL 230

Query: 241 IFPHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            FPHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF
Sbjct: 231 QFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNF 290

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----- 340
            TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T     
Sbjct: 291 FTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP 343

Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHIL 392
                 S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+
Sbjct: 344 AAAFELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGII 403

Query: 393 GI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           G+             V     N+ I   I +  Q R      K ++ +D IR  L     
Sbjct: 404 GLLQRDPTEFLQGGAVSDGLSNEEIDDLIARRKQAR----ADKNWAESDRIRDLLNEHKI 459

Query: 441 ILED 444
           ILED
Sbjct: 460 ILED 463


>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 494

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 187/483 (38%), Positives = 260/483 (53%), Gaps = 58/483 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +YNTL R+   F  IDP+N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR   
Sbjct: 20  KPMLNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR--- 76

Query: 62  GEKC---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
             +C   +TYVRNITDIDDKII RA +        + I  +T++      +D   L  L 
Sbjct: 77  --ECGYPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIAAMHEDADALGVLR 128

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           P  +P+AT +IPQMI +I+++I  G AY  AN ++ +     P YG  S + +D+ + G 
Sbjct: 129 PDLEPKATENIPQMIAMIESLIQKGKAYPAANGDVYYAVREFPAYGQLSGKSLDDLRAGE 188

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           RV     K++P DF+LWK +   EP WESPWG+GRPGWHIECSAMS +  G  FDIHGGG
Sbjct: 189 RVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGG 248

Query: 238 LDLIFPHHENEIAQS-------CCADR--------IEKTANIWIHNGFLNLEGRKMSKSN 282
            DL FPHHENEIAQS       C  D         +      W+HNGF+ ++G KMSKS 
Sbjct: 249 ADLQFPHHENEIAQSVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSL 308

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-- 340
           GNF TI ++L       + +   V+R  +L  HYR P++++   L +A+  L++      
Sbjct: 309 GNFFTIRDVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALK 361

Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA 389
                    S +         +A+ +D  TV A+  L +LA E  K  D  L     A  
Sbjct: 362 NTPPAGFALSETANNYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTRDAALSGCLKALG 421

Query: 390 HILGI--EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            I+G+      E L    +        IE L+  R      K ++ +D IR  L ++  I
Sbjct: 422 GIIGLLQRDPTEFLQGGTASDGLSNEEIENLIAMRKQARADKNWAESDRIRDLLTAQNII 481

Query: 442 LED 444
           LED
Sbjct: 482 LED 484


>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 461

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
           + +D NT  A   L  +ARE    K  D+      ++H+  I      L +   +     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 408 ---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWTAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 473

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 258/478 (53%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 346 EFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGL 405

Query: 394 -----IEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPIEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 473

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 14  LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 71

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 72  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 125

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 126 ATHHIPEIIELTERLIAREHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEIAD 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 186 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 246 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLEY-------YD 297

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +         +          +    +A
Sbjct: 298 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVHAAPAGGAEFEARFRAA 357

Query: 355 LYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  LARE         T  + L       AH+LG+      L     
Sbjct: 358 MDDDFNTPEAYSVLFDLAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSG 417

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 418 AQSDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 471

Query: 459 QK 460
           +K
Sbjct: 472 RK 473


>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 465

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 183/476 (38%), Positives = 263/476 (55%), Gaps = 57/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 1   MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E  S P       + +K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIINRSHEEGIS-P-----EEVAAKYIKEYFVDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    R  KT +  W+HNG++N+   KMSKS GNF T+ ++        + + 
Sbjct: 233 HENEIAQSEA--RSGKTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYD 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV------- 351
             ++R  ML  HYR P++F+ + L +A+  L +   T      T   +++  +       
Sbjct: 284 LEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVEL 343

Query: 352 -----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                      + A+ +D+NT  A+  + +LA+    N D           L  FN    
Sbjct: 344 VKELDGFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTG 403

Query: 391 ILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L I   K+   L+K+    IE+L+Q+R    K K+F  AD IR+QL   G +LED
Sbjct: 404 VLNIVNKKKDTVLDKD----IEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLED 455


>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
          Length = 523

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 187/503 (37%), Positives = 268/503 (53%), Gaps = 80/503 (15%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y   E
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        DA+S+ +S+   +F +D   L CL PTH+P
Sbjct: 81  --VNYVRNFTDIDDKIIKRANEAG-----EDALSL-SSRFIDEFHRDMYELQCLPPTHEP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI Q+I LI  I+ +G AY    ++ F   + P+Y S S RK+D+ + GTRV    
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   E     W+HNGF+N +G+KM+K++ NF TI +++         + 
Sbjct: 253 HHENELAQSQAA-YPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YH 304

Query: 304 APVIRLAMLMTHYREPID--------------FTVQRLTEAEILLSKWPQTSTSKGIIDP 349
              +RL ++ THYR  ++              +  Q L + E  +S + +      I  P
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSI--P 362

Query: 350 A------------VLSALYNDLNTVSA--------------------------------- 364
           A             L  + +DL+T +A                                 
Sbjct: 363 ADDQKLIEENHSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDY 422

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL---VQERLILLK 421
           IQAL  L  E T    +L +   S+    ++  K+   K   +  E+L   +++R +  K
Sbjct: 423 IQALVALQNEVTDKLSILGLMPMSSLAEALKQLKDKALKRAGMTAEQLQQMIEQRTLARK 482

Query: 422 MKKFSSADYIRKQLESKGFILED 444
            K F+ +D IR +L + G  L D
Sbjct: 483 NKDFAESDRIRTELSALGIALMD 505


>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 470

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 182/463 (39%), Positives = 260/463 (56%), Gaps = 41/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K YN+L R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 16  LKFYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA++        ++I  +TS+      +D  RL  + P  +P+
Sbjct: 75  -VTYVRNITDIDDKIIKRAQEN------GESIQALTSRFITAMDEDAARLGVMRPDLEPK 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M+ +I  +I  G AY A+N ++ +  SS   YG  S + +++ + G RV    
Sbjct: 128 ATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQ 187

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM + +LG  FDIHGGG DL FP
Sbjct: 188 YKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFP 247

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+HNGF+ ++  KMSKS GNF TI ++LE        + 
Sbjct: 248 HHENEIAQSEAANGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLE-------KYD 299

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A V+R  +L   YR P++++   L +A   L++    +  +G+  P              
Sbjct: 300 AEVVRFFILRAQYRSPLNYSDHHLDDARQALTRL--YTALRGLALPTFTIDWQQPQAARF 357

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK----------EHL 401
            +A+ +D NT  A   L +LA E  +   L       A    + + +          E  
Sbjct: 358 KAAMDDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESA 417

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +  IE+ +Q RL   + K F+ AD IRKQL  +G +LED
Sbjct: 418 QGRSADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLED 460


>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 463

 Score =  322 bits (826), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 195/483 (40%), Positives = 270/483 (55%), Gaps = 50/483 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++KIYNTL R    F  I+P  +R+YVCG TVYD+ HIG+AR ++VFD++ R LR    E
Sbjct: 3   ELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASGYE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKII+RA      +   + I+ +T++      +D   L    P H+P
Sbjct: 63  --VTYVRNITDIDDKIIKRA------VENGETIAQLTNRFIDAMNEDAAALGVQRPDHEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT ++PQM+ LI  +  +G AY+A++ ++ +     P YG  S + +D+ + G RV   
Sbjct: 115 RATQYVPQMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVN 174

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF+LWK + P EP    W+SPWG GRPGWHIECSAMSS  LG  FDIHGGG D
Sbjct: 175 TGKRDPLDFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A +     N W+HNGF+ ++  KMSKS GNF TI ++L       
Sbjct: 235 LQFPHHENEIAQSEGAHQ-HTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVL------- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA- 350
           + +   V+R  +L  HYR P++++   L +A   L++         PQ      + D A 
Sbjct: 287 KKYDPEVLRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALKDVPPQAGGL--VADEAH 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGI--EVCKEHLNK 403
              +  AL +D NT  AI  L +LA E  ++   +      A A ILG+      E+L  
Sbjct: 345 AVRLADALNDDFNTPVAIAVLFELANEVNRSRSPVQARQLKALAGILGLLQREPGEYLKG 404

Query: 404 NISIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            ++ A       IE L+  R      K F+ AD IR +L   G ILED         +T 
Sbjct: 405 GVAAAEGLGEAEIEALIAARKAAKAGKNFAEADRIRAELTEAGIILEDKPGG-----LTE 459

Query: 457 WKQ 459
           W++
Sbjct: 460 WRR 462


>gi|259909186|ref|YP_002649542.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964808|emb|CAX56330.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479232|emb|CAY75148.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 462

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 194/483 (40%), Positives = 264/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I   NI MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGNIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESIERLTNRMIDEMHKDFAALNILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I   HAY A+N +++F   S P YGS SR+ +D+ + G RV    
Sbjct: 114 ATRHIAEIIELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   L + FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLSEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L+        +
Sbjct: 234 PHHENEIAQSTCA-HDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQ-------HY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGI--IDPAVLS 353
            A  +R  ++  HYR  +++    L +A        I L      +T  G    +     
Sbjct: 286 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARFRE 345

Query: 354 ALYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI--EVCKEHLNK 403
           A+ +D NT  A  AL  LARE    K  D      L         +LG+  +  ++ L  
Sbjct: 346 AMDDDFNTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPQQFLQS 405

Query: 404 NISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            ++I       IE L+Q R+   K K ++ AD  R +L   G +LED      G   TRW
Sbjct: 406 GVNINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTRW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 473

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 189/477 (39%), Positives = 255/477 (53%), Gaps = 58/477 (12%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC-- 65
           YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C  
Sbjct: 5   YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECGY 59

Query: 66  -VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+
Sbjct: 60  PLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDG 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL FP
Sbjct: 174 FKRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF TI
Sbjct: 234 HHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTI 293

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
            E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    D
Sbjct: 294 REVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPAD 346

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI- 394
           P               A+ +D +TV A+  L +LA E   T N  L     A   I+G+ 
Sbjct: 347 PMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLL 406

Query: 395 -EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                E L          +  I+ L+  R      K ++ +D IR  L     ILED
Sbjct: 407 QRDPTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|237736150|ref|ZP_04566631.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421703|gb|EEO36750.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 472

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 190/481 (39%), Positives = 269/481 (55%), Gaps = 54/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK+ EF+ +    + MYVCGPTVY++ HIGNARP I FD + R   +  G K
Sbjct: 2   IKIYNTLTRKLEEFKPVKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEFR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV N TD+DDKII+RA +E  S         + +K  + + +DT ++        +P
Sbjct: 61  -VTYVSNFTDVDDKIIKRANEEGISC------EEVAAKYIKAYFEDTAKVNLKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT HI  MI LI+++I  GHAYE+  ++ FD  S  + Y   S + +++ + G R+   
Sbjct: 114 KATEHIGGMIKLIKSLIEKGHAYESQGDVYFDVESYKDEYLGLSHQNLEDLRSGARIEIS 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK++   EP W SPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 174 EIKKSPLDFALWKKAKEGEPSWNSPWGQGRPGWHIECSAMSHKYLGDTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C    +  A  W+HNG++N+ G KMSKS GNF  + ++LE   + GR  
Sbjct: 234 PHHENEIAQSKCGCGGD-YARYWMHNGYINVNGEKMSKSLGNFFLLRDVLE--HYDGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIID------------ 348
              V+RL +L +HYR+PIDF+   LT+A+  L +         + +ID            
Sbjct: 289 ---VVRLFVLSSHYRKPIDFSDAELTQAKTSLERIENALMRGKEAVIDVKADGSSCMELK 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNA 387
                     ++A+  D NT   + A+ +L +E  K  D              +  I N 
Sbjct: 346 EQLAVAKEKFIAAMDEDFNTSMGLGAIFELVKELNKAVDTPINAEGAEVVKETVEYIINV 405

Query: 388 SAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               LG+++  E +  N+ S  IE +++ R      K ++ +D IR +L   G  ++D K
Sbjct: 406 MEEALGVKLKLETVVGNMTSELIEFILELRREARNEKNWAMSDKIRDRLAEMGIKIKDGK 465

Query: 447 N 447
           +
Sbjct: 466 D 466


>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 469

 Score =  322 bits (825), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 185/487 (37%), Positives = 257/487 (52%), Gaps = 56/487 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN L RK   F  +    +  Y CGPTVYD+ HIGNARP IVFDVL R + +      V
Sbjct: 5   LYNDLTRKKEPFVPLKDGEVGFYSCGPTVYDYFHIGNARPFIVFDVLRRYMEF--SGYRV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+V+N TD+DDK+I RA +      +   +  +  K    + +D   L     TH PRAT
Sbjct: 63  TFVQNFTDVDDKMINRANE------MGITVQELAEKTIADYFEDADALGIKRATHYPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HI ++I L++ +   GHAYE +  + FD SS P YG  SR+ I+E + G+R+     K+
Sbjct: 117 EHIEEIIDLVKRLEESGHAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRIEVNSSKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF+LWK   P EP W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHE
Sbjct: 177 NPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTDLTFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQ+  A   E     W+HN ++ ++  KMSKS GNF+T  E         R   +P+
Sbjct: 237 NEIAQAEAATE-EVFVRYWLHNEYILIDKEKMSKSLGNFMTARE--------ARKHYSPL 287

Query: 307 -IRLAMLMTHYREPIDFTVQRLTEAEILLSK----W----------PQTSTSKGIIDP-- 349
            IR+ ML  HYR P++F  + L +A   L +    W          P +     I++   
Sbjct: 288 AIRMFMLSAHYRSPVNFGPEGLQQATAALERLHNCWSDFRYAADNRPHSQGQDDIVESIK 347

Query: 350 ----AVLSALYNDLNTVSAIQAL---------HKLARESTKNHDLLPI---FNASAHILG 393
                 ++A+ +D NT  AI  +         H    +S  +  +  I   F     I+G
Sbjct: 348 RHRDDFVAAMDDDFNTAGAIGHIFEAVSTVNGHLKGNDSLSSEGIKAIEDFFRDVDSIMG 407

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +         + S  IE L+++R      K F+++D IR QL +KG ILED        +
Sbjct: 408 LIGLDSDGQDDDSEEIESLIRKREEARSAKDFATSDAIRDQLAAKGVILEDTP------Q 461

Query: 454 MTRWKQK 460
            T+WK+K
Sbjct: 462 GTKWKKK 468


>gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
           meningitidis WUE 2594]
          Length = 699

 Score =  322 bits (825), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 259/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 284

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 285 YPLTYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEP 338

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 339 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 398

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 399 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 458

Query: 243 PHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 459 PHHENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 518

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 519 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPA 571

Query: 348 DPA-----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
           DP               A+ +D +TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 572 DPMPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGL 631

Query: 394 -----IEVCK-EHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   I+ L+  R      K ++ +D IR  L     ILED
Sbjct: 632 LQRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILED 689


>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
           NRL30031/H210]
 gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
           NRL30031/H210]
          Length = 473

 Score =  322 bits (825), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 259/482 (53%), Gaps = 66/482 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----ST 342
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T     +T
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAT 345

Query: 343 SKGIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
           +  + + A        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+
Sbjct: 346 AFELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 405

Query: 395 ------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                        V     N+ I   I +  Q R      K ++ +D IR  L     IL
Sbjct: 406 LQRDPTEFLQGGAVSDGLSNEEIDDLIARRKQAR----ADKNWAESDRIRDLLNEHKIIL 461

Query: 443 ED 444
           ED
Sbjct: 462 ED 463


>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
          Length = 569

 Score =  322 bits (825), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 195/511 (38%), Positives = 275/511 (53%), Gaps = 80/511 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++ +YNT  R+   FQ   P   + MYVCG T YD +HIG+AR  + FDVLYR LRY  
Sbjct: 70  RELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL- 128

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+ 
Sbjct: 129 -DHKVRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMANLHCLPPSV 181

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI Q+I +I+ II +  AY    ++ F   + P YG  S RK+D+ + G RV  
Sbjct: 182 EPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAV 241

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DLI
Sbjct: 242 DERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 301

Query: 242 FPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS   CC    + + N WIHNGF+N+  +KMSKS GNF+TI ++ E     
Sbjct: 302 FPHHENEIAQSRAACC----DSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTEL---- 353

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
              +    +R+ +L THYR PI++T+++L  A   L    QT                  
Sbjct: 354 ---YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 410

Query: 341 ---STSKGI--IDPAVLSALYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFN 386
              +T+  I  +     +++ +DL+T  A+ A+ +           R+  K    L   +
Sbjct: 411 LPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLS 470

Query: 387 A----------------SAHILGIEVCKEHLNKNISIAIEKLVQ---ERLILLKMKKFSS 427
           A                S++   ++  +E   +  S+  E+++Q   ER    K K++  
Sbjct: 471 AMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEK 530

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +D IRK+L + G  L D   PD     T W+
Sbjct: 531 SDEIRKELAAVGIALMD--GPDG----TTWR 555


>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
 gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
 gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
          Length = 569

 Score =  322 bits (825), Expect = 8e-86,   Method: Compositional matrix adjust.
 Identities = 195/511 (38%), Positives = 275/511 (53%), Gaps = 80/511 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++ +YNT  R+   FQ   P   + MYVCG T YD +HIG+AR  + FDVLYR LRY  
Sbjct: 70  RELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL- 128

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+ 
Sbjct: 129 -DHKVRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMANLHCLPPSV 181

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI Q+I +I+ II +  AY    ++ F   + P YG  S RK+D+ + G RV  
Sbjct: 182 EPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAV 241

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DLI
Sbjct: 242 DERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 301

Query: 242 FPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS   CC    + + N WIHNGF+N+  +KMSKS GNF+TI ++ E     
Sbjct: 302 FPHHENEIAQSRAACC----DSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTEL---- 353

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
              +    +R+ +L THYR PI++T+++L  A   L    QT                  
Sbjct: 354 ---YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 410

Query: 341 ---STSKGI--IDPAVLSALYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFN 386
              +T+  I  +     +++ +DL+T  A+ A+ +           R+  K    L   +
Sbjct: 411 LPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLS 470

Query: 387 A----------------SAHILGIEVCKEHLNKNISIAIEKLVQ---ERLILLKMKKFSS 427
           A                S++   ++  +E   +  S+  E+++Q   ER    K K++  
Sbjct: 471 AMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEK 530

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +D IRK+L + G  L D   PD     T W+
Sbjct: 531 SDEIRKELAAVGIALMD--GPDG----TTWR 555


>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 467

 Score =  322 bits (825), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 182/471 (38%), Positives = 260/471 (55%), Gaps = 45/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   F  IDP  +RMYVCG TVYD+ H+G+AR M+ FDV+ R LR    + 
Sbjct: 1   MQIYNTLTRRKETFTPIDPGRVRMYVCGMTVYDYCHLGHARVMVAFDVITRYLRARGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKI++RA +        + I+ +T +      +D  RL  L P  +PR
Sbjct: 60  -VTYVRNITDIDDKILKRAEEN------GETIASLTDRMIDAMHEDEGRLGVLRPDAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ +++ +IQ +I  G+AY A+N ++ +      +YG  + R  D+ + G RV  + 
Sbjct: 113 ATQHVDEIVTMIQTLIDKGYAYAASNGDVYYRVRKFADYGKLNNRDPDDMRAGARVDVEE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P E  W SPWG GRPGWHIECSAMS+  LG+ FDIHGGG DL FP
Sbjct: 173 LKEDPLDFVLWKAAKPGEADWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++  N W+H G + ++  KMSKS GNF TI E+LE          
Sbjct: 233 HHENEIAQSEAATG-KQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLEHHD------- 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA----V 351
             V+R  ++ +HYR PI++    L +A   L ++         +   + G +DP+     
Sbjct: 285 PEVVRYLLVASHYRSPINYAPDSLADARKSLERFYNALDGVALEGVETPGEVDPSFDRRF 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH----DLLPIFNASAHILGIEVCKEHLNKNISI 407
           + A+ +D NT  AI  L  LARE  +      +  P   A    LG  +        + +
Sbjct: 345 IEAMDDDFNTAGAISVLFDLARELNRARKEAPEQAPALAAELKRLGGVLGLLQQEPAVFL 404

Query: 408 ------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                        IE  + ER    + + F+ AD IR +L + G +L+D +
Sbjct: 405 KGGAGELPLSEAEIEARISERAEAKQARDFARADAIRDELAALGIVLKDSR 455


>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 461

 Score =  322 bits (825), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA +       N++   +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRALEN------NESCEQLTTRMLAEMHKDFDALNLKRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIALTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A  AL  +ARE         T  + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSALFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTNDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|325661900|ref|ZP_08150521.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471878|gb|EGC75095.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 468

 Score =  322 bits (825), Expect = 9e-86,   Method: Compositional matrix adjust.
 Identities = 194/476 (40%), Positives = 252/476 (52%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K  EF  ++   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKLYNTLTKKKEEFVPLEEKKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +EH S         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEEHVSA------EEISQRYIAECKKDMEGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 113 ATQEIDGMIEMIGQLIEKGYAYEKNGTVYFRTRKFGPYGKLSHKNLDDLRSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG   DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREIAE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRL-----------TEAEIL------LSKWPQTSTSK 344
           +   V+R  ML  HYR P++F+ + +           T AE L            T   K
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMAASKNGLERIITAAENLKYLAANAKNGEMTDAEK 344

Query: 345 GIIDP------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
             I        A   A+ +D NT  AI A+ +L + +    D          LL      
Sbjct: 345 AQIQETEKFVTAFEEAMEDDFNTADAIAAIFELVKFANTTADETSSQAYDSALLERIVHL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +LGI V KE   + ++  IE L++ER    K K F  AD IR +L  KG ILED
Sbjct: 405 SDVLGIIVVKEE--ELLAEDIEALIEERQAARKAKNFQRADEIRNELLEKGIILED 458


>gi|258422624|ref|ZP_05685530.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257847196|gb|EEV71204.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 471

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 271/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  
Sbjct: 63  GYNVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMNDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEI 288

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQAYID 348

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 461


>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
 gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
 gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 476

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/484 (39%), Positives = 260/484 (53%), Gaps = 58/484 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M     IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR  
Sbjct: 1   MMNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-- 58

Query: 61  YGEKC---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
              +C   +TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L
Sbjct: 59  ---ECGYPLTYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVL 109

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
            P  +P+AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G
Sbjct: 110 RPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAG 169

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            RV     K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGG
Sbjct: 170 ERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGG 229

Query: 237 GLDLIFPHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKS 281
           G DL FPHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS
Sbjct: 230 GADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKS 289

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GNF TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T 
Sbjct: 290 LGNFFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTL 342

Query: 341 -STSKGIIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNAS 388
            +T     D +           +A+ +D  TV A+  L +LA E  K +D  L     A 
Sbjct: 343 KNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKAL 402

Query: 389 AHILG------IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             I+G      IE  +   ++  +S   IE L+  R      K ++ +D IR  L     
Sbjct: 403 GGIIGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKI 462

Query: 441 ILED 444
           ILED
Sbjct: 463 ILED 466


>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 473

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 14  LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 71

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +TS+   +  KD   L    P  +PR
Sbjct: 72  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTSRMLAEMHKDFDALNLERPDLEPR 125

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 126 ATHHIPEIIELTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVAD 185

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 186 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 245

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 246 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 297

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 298 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 357

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 358 MDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQSG 417

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 418 AQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 471

Query: 459 QK 460
           +K
Sbjct: 472 RK 473


>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 461

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 264/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  ++    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENSETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L++ +I   HAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELVERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +     PA          +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANAAPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|238898628|ref|YP_002924309.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511836|sp|C4K6G8|SYC_HAMD5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229466387|gb|ACQ68161.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 461

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 187/481 (38%), Positives = 262/481 (54%), Gaps = 54/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT  RK   F  I P+ + MYVCG T+YD  HIG+AR  +VFDV+ R LRY     
Sbjct: 2   LKIFNTFNRKKELFTPIHPNTVGMYVCGVTIYDLCHIGHARTFVVFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA Q H S         +T++  ++  +D   L  L P  +PR
Sbjct: 60  SLTYVRNITDIDDKIIQRASQNHQSC------EALTAQMLKEMYRDFDELNLLRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L Q ++   +AY  AN +++F     P+YG  SR+ +++ + G RV    
Sbjct: 114 ATEHITEMITLTQQLLDQKYAYVAANGDVLFSVEKNPHYGLLSRQNLEQLQAGARVEVME 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK S P EP W SPWG GRPGWHIECSAM++  LG  FDIHGGG DL+FP
Sbjct: 174 SKHHPMDFVLWKMSKPNEPHWPSPWGEGRPGWHIECSAMNAKALGPHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA +     N W+H+G + +   KMSKS  NF TI +LL+        + 
Sbjct: 234 HHENEMAQSICAHKA-PYVNCWMHSGMIMINKEKMSKSLNNFCTIRDLLQ-------RYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------WPQTSTSKGIIDPAV 351
              +R  +L  HYR P+++T + L +A I L++            +P+   S    +   
Sbjct: 286 PETLRYFLLSAHYRSPLNYTEENLKQARIALTRLYTALRDTNQKAFPEGGES---FEKRF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK------------- 398
           +SA+ +D NT  A   L   ARE  K     P    +A  L  ++ K             
Sbjct: 343 VSAMNDDFNTPEAYAVLFDTAREINKLKKEHP---KAADGLAAQLRKMGKVLGLLESGSL 399

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E  +++ S  I  L+++R +    K +  AD  R +L   G ++ED +N  N +
Sbjct: 400 LSLLNPEKDDRHQSAEIADLIEKRNLARAHKNWEEADNARTRLFEMGVVVEDTENGTNWR 459

Query: 453 R 453
           R
Sbjct: 460 R 460


>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
           23834]
 gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
           23834]
          Length = 473

 Score =  322 bits (824), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/493 (38%), Positives = 264/493 (53%), Gaps = 64/493 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDVEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIEALIRNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS    G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I ++L       + +   ++R  +L  HYR P++++   L +A+  L++   T  +   +
Sbjct: 293 IRDVL-------KQYDPEIVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLANVPPV 345

Query: 348 DPAVLS-----------ALYNDLNTVSAIQALHKLARES--TKNHDLLPIFNASAHILGI 394
           +  V S           A+ +D +TV A+  L +LA E+  T++ +L     A A  +G+
Sbjct: 346 EFQVASEANDYTRRFFAAMNDDFDTVQAVAVLFELAGEANKTQSAELSGCLKALAGTIGL 405

Query: 395 ------EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                 E  +     N   +  IE L+  R      K ++ +D IR  L  +G  L D  
Sbjct: 406 LQRNPTEFLQGGATANGLSNEEIEALIARRKQARADKNWAESDRIRDLLAEQGITLRD-- 463

Query: 447 NPDNGQRMTRWKQ 459
               G   T W +
Sbjct: 464 ----GADGTSWTR 472


>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
          Length = 487

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/511 (36%), Positives = 267/511 (52%), Gaps = 81/511 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT  RK  EF    P  + MYVCGPT Y+  H+GNARP+IVFD + R   Y   + 
Sbjct: 3   IKLYNTCTRKKEEFIPRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFEYKGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDIDDKII RAR+E+   PI      + +K  +++ KD   L     T  PR
Sbjct: 62  -VTYVQNFTDIDDKIINRAREENTD-PIT-----LAAKYIREYFKDAAALGVREATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I +I+ I+ +G+AY+ + ++ F   S   YG  S R +++ + G RV     
Sbjct: 115 VSEHLDEIIEMIRGIMKNGYAYQLDGDVYFSVESFKGYGKLSGRSLEDMQAGARVDVDTR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM++ YLG  FDIHGGG DLIFPH
Sbjct: 175 KRHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMANKYLGMGFDIHGGGFDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+         A  W+HNGF+ +   KMSKS GNF T+ E+L         +  
Sbjct: 235 HENEIAQAEAYAGCGPFARYWMHNGFITVNEEKMSKSLGNFFTVREILA-------KYDP 287

Query: 305 PVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
            V+R  ML THYR P+DF          ++ RL  A   +    +T+    + +P +  A
Sbjct: 288 EVVRFYMLSTHYRSPLDFDDTKLEMNRKSLSRLHNALDNIESILKTNKFGEVENPELEKA 347

Query: 355 LY------------------NDLNTVSAIQALHKLARESTKN------------------ 378
           L                   +D NT  AI  L  LAR+S                     
Sbjct: 348 LADLLRAREKAVRDFEEAMDDDFNTALAIAVLFDLARDSNAFIHAATSAGGDALLQEVKG 407

Query: 379 --HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM-------KKFSSAD 429
               +   F     +LG+   ++   +  +  +++L+Q   I+L +       K +++AD
Sbjct: 408 ALQQVFDTFMKLGQVLGL--FEKRGTQGDTGLVDRLMQ---IILDIRSEARARKDWATAD 462

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L   G I+ED  +P       RWK+K
Sbjct: 463 GIRNKLNELGIIIED--SPQG----ARWKRK 487


>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 495

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 192/500 (38%), Positives = 271/500 (54%), Gaps = 76/500 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L RK  EF  I+   +RMYVCG TVYD  H+G+AR M+VFDV+ R LR    E 
Sbjct: 2   LRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA ++       ++I  +T++  Q   +D   L  L P  +PR
Sbjct: 61  -VMYVRNITDIDDKIIHRANEK------GESIHALTARYIQALHEDEASLQILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  ++ +++ ++  G+AY+  N +I +D S    YG+ S + +++ + G RV    
Sbjct: 114 ATESMEAILAMVRQLLEQGYAYQGENGDIYYDVSHFEGYGALSGKHLEDLRAGERVQVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A    K  N W+HNGF+ L+  KMSKS GNF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-SKFVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLE-------HYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGII------ 347
             V+R  +L +HYR P++++ Q+L  A+  +++              ++++G+       
Sbjct: 286 PEVLRYFILSSHYRSPLNYSKQQLDTAKAAMTRLYTALRGIPRGDDRASAQGLSWEFVDG 345

Query: 348 -DPAVL---SALYNDLNTVSAIQAL----HKLAR-----ESTKNHDLLPIFNASAHILGI 394
            DP +L    A+ +D NT  A+  L    H L R     ++ K   L  +  A   ILG+
Sbjct: 346 EDPFILRFREAMDDDFNTPEALALLNEVRHALNRARKGGDTEKGQSLAVLLRALGGILGL 405

Query: 395 --------------EVCKEHLNKNISIA----------------IEKLVQERLILLKMKK 424
                          V      K  S++                IE+LV +R +  K K 
Sbjct: 406 LAHEPEQFLRDPRQMVVVSDTAKTTSLSLTSQTSTEKVVLSHDGIEQLVAQRTVARKNKD 465

Query: 425 FSSADYIRKQLESKGFILED 444
           ++ AD IR  L+ +G  LED
Sbjct: 466 WAEADRIRGILKDQGITLED 485


>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|187629805|sp|A9KSM5|SYC_CLOPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 470

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 182/479 (37%), Positives = 254/479 (53%), Gaps = 58/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +   EF  +    + MYVCGPTVY++ HIGNARP++VFD + R L Y   + 
Sbjct: 1   MKIYNTLTKAKEEFIPLQEGKVSMYVCGPTVYNYIHIGNARPVVVFDTVRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E  S         I+ +  ++++KDT  L  L  T +P+
Sbjct: 60  -VNFVSNFTDVDDKIIKKANEEGVSA------HEISERYIKEYLKDTEALNVLPVTTRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI +I+ +I  GHAYE N  + F T S   YG  S++ ID+ + G R+     
Sbjct: 113 ATEEIDGMIDMIEELIEKGHAYEKNGTVYFKTRSFKQYGKLSKKNIDDLEAGARIAVADE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF+LWK     EP W +PW  GRPGWHIECS MS  YLG   DIH GG DLIFPH
Sbjct: 173 KDDPMDFVLWKPKKVGEPAWSAPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLIFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQ+ CC  +  + A  W+HNGFLN++ +KMSKS GNF T+ E+          + 
Sbjct: 233 HENEIAQTECCTGK--EFAKYWMHNGFLNVDNKKMSKSEGNFFTVREIF-------AEYA 283

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVL- 352
             V+R  +L  +YR PI+F+          ++R+  A   L    +    KG +   +  
Sbjct: 284 PAVLRFFLLSVNYRSPINFSRDIIESSKNGLERIQTAVEQLHFLAKVKAEKGELSTELTE 343

Query: 353 -----------------SALYNDLNTVSAIQALHKLARESTKN----------HDLLPIF 385
                             A+ +D NT  AI ++ ++ + S               +L   
Sbjct: 344 SESTLLKEFDALIKKFEDAMDDDFNTADAISSIFEMVKLSNTYVTVESSVEMIQKVLSNI 403

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                ILG+E   E   + +   IE+L+ +R    K K F+ +D IR  L  KG ILED
Sbjct: 404 TTFCDILGLET--EKKAEILDEEIEQLIADRQSARKAKDFAKSDEIRNLLLEKGIILED 460


>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|61216194|sp|Q6FC71|SYC_ACIAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 473

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 189/474 (39%), Positives = 265/474 (55%), Gaps = 53/474 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF    P +I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKPGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWD--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +       N+ I  +TS+      +D  +L C  P   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------NETIQQLTSRFIDAMNEDAAKLGCAEPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I +M  +I  ++  G AY A+N ++ F+ S    YG  S RK+++ + G   RV  + 
Sbjct: 118 EYIGEMQNMISTLVDKGSAYPASNGDVYFEVSKFEKYGRLSGRKLEDMQAGASERVDIEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 178 EKKHPFDFVLWKGAKPNEPSWVSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLTFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKGIIDP 349
             VIR  ++ +HYR P++F+   L EA+  L+++                T   +  I+ 
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYEQVYGQNDSTQKDEQFIER 349

Query: 350 AVLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI------ 394
             + A+ +D NT  AI  L +L RE       +  +   I+  +      ILG+      
Sbjct: 350 FNI-AMRDDFNTPEAIAVLFELNRELNRAVKEQQAEQAAIYYVTLRHLTQILGLVQHDVD 408

Query: 395 EVCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           E  K  + + +       I+ ++Q+R    K K FS AD IR+ L  +G +LED
Sbjct: 409 EFLKSDIGQEVLSLSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGVVLED 462


>gi|192361138|ref|YP_001982161.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190687303|gb|ACE84981.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 466

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 188/485 (38%), Positives = 270/485 (55%), Gaps = 50/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ + P  I MYVCG TVYD+ HIG+AR ++ FDV+ + LR    + 
Sbjct: 3   LQIYNTLSRQKEEFKPLKPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGWD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        +  + +T +      +D  RL    P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIKRANEN------GEQYTDLTKRFIDYMHEDEARLGIARPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I Q+I + Q +I  G+AY A+N ++ +  +   +YG  + + +DE  +G R+    
Sbjct: 115 ATAFIDQIINMNQALIDKGYAYPASNGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP W+SPWG+GRPGWHIECSAMS    G  FDIHGGG DL FP
Sbjct: 175 IKEDPRDFVLWKAAKAGEPAWKSPWGQGRPGWHIECSAMSKDCCGTTFDIHGGGPDLPFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+   K  N W+H G + ++G KMSKS GNF TI ++LE        + 
Sbjct: 235 HHENEIAQSEAANGC-KYVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------PQTSTSKGIIDPA 350
             V+R  ++ +HYR PI++    L EA   L ++             P T         +
Sbjct: 287 PEVVRFLLVSSHYRSPINYAEDNLVEARTGLERFYGALRDYADVESLPLTELQASDYYRS 346

Query: 351 VLSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI--EVCKEH 400
            ++A+ +D NT  A+ +++ L RE          +   L     A   ILGI  E  +  
Sbjct: 347 FVAAMNDDFNTRVALASMYDLVRELNNAGKTDVERAQRLAGELKALGLILGILQENPRVF 406

Query: 401 LNKNIS--IA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           L    S  IA   +++LV ER+   K K ++ AD +RKQL   G ++ED K+       T
Sbjct: 407 LQTGTSGQIAAEEVDRLVAERIQAKKEKNYARADEVRKQLADNGILIEDAKDG-----TT 461

Query: 456 RWKQK 460
           +W+++
Sbjct: 462 QWRRE 466


>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 476

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/484 (39%), Positives = 260/484 (53%), Gaps = 58/484 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M     IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR  
Sbjct: 1   MMNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-- 58

Query: 61  YGEKC---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
              +C   +TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L
Sbjct: 59  ---ECGYPLTYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVL 109

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
            P  +P+AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G
Sbjct: 110 RPDIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAG 169

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            RV     K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGG
Sbjct: 170 ERVEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGG 229

Query: 237 GLDLIFPHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKS 281
           G DL FPHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS
Sbjct: 230 GADLQFPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKS 289

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GNF TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T 
Sbjct: 290 LGNFFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTL 342

Query: 341 -STSKGIIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNAS 388
            +T     D +           +A+ +D  TV A+  L +LA E  K +D  L     A 
Sbjct: 343 KNTPAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKAL 402

Query: 389 AHILG------IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             I+G      IE  +   ++  +S   IE L+  R      K ++ +D IR  L     
Sbjct: 403 GGIIGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKI 462

Query: 441 ILED 444
           ILED
Sbjct: 463 ILED 466


>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 473

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 191/478 (39%), Positives = 260/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKVGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 346 EFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 405

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|330959375|gb|EGH59635.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 460

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 180/478 (37%), Positives = 261/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSAAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ R+    +  D+             A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVRDINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 490

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 195/495 (39%), Positives = 254/495 (51%), Gaps = 71/495 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F  + P  +++Y CG TVYD  HIG+AR  +VFDV+ R LR+  G K
Sbjct: 1   MQVYNTLSRRKEAFIPLKPGIVQIYACGVTVYDDCHIGHARSAVVFDVIVRYLRFL-GNK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V++VRN TDIDDKII+RA +EH S         +       F +D   L       +P+
Sbjct: 60  -VSWVRNFTDIDDKIIQRAEREHTSW------KTVAETYIASFQRDMAALGVAPADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI ++I  IQ +   G AY+ N ++ F  +  P YG  S R +D+   G RV     
Sbjct: 113 ATDHIDEIIGFIQVLEDQGLAYQRNGDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK S P EP W+SPWG GRPGWHIECSAMS HYLG+ FDIHGGG DLIFPH
Sbjct: 173 KDNPFDFALWKASKPGEPAWDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG + +   KMSKS GNF TI E+L   KF       
Sbjct: 233 HENEIAQSEAAHG-KPLARYWLHNGMVTVNQEKMSKSLGNFFTIREVL--AKFH-----P 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLS------ 353
            V+R  ++  HYR P+DF+ Q L EAE  L +   T      T+  I  P  +S      
Sbjct: 285 EVVRFFLIQNHYRSPLDFSDQALAEAENALERLYSTLARLDQTTGPIAAPEAISGAFSLS 344

Query: 354 -------------------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG- 393
                              A+ +D NT  A+  L    R   +  +  P  NA    L  
Sbjct: 345 GLDSEEQSRLLTIRSRFLEAMDDDFNTAQALGVLFDAVRLLNRIVEHNPSGNADMSALAW 404

Query: 394 ----IEVCKEHLN-----------------KNISI---AIEKLVQERLILLKMKKFSSAD 429
               + V    LN                   ++I    IE+L+  R    K + F+ AD
Sbjct: 405 TRRELTVLGGILNLLQQDPQTMLQNLRQKTDALTIPPSEIERLIAARAEARKQRDFTKAD 464

Query: 430 YIRKQLESKGFILED 444
            IR+QL   G +LED
Sbjct: 465 AIRQQLAEAGVLLED 479


>gi|317500158|ref|ZP_07958391.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087615|ref|ZP_08336543.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898447|gb|EFV20485.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330399794|gb|EGG79454.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 468

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 263/491 (53%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  ++   ++MYVCGPTVY+F HIGNARPMI FD + R   Y   E 
Sbjct: 1   MKIYNTLSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIAFDTVRRYFEYKGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E  S         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEEGVSA------DEISKRYIAECKKDMEAMNVKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVEMISTLIEKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLRSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFLN++ +KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-----------------SKWPQTSTSK 344
           +   ++R  ML  HYR P++F+ + +  A+  L                 S+   T + K
Sbjct: 285 YDLQILRFFMLSAHYRSPLNFSAELMEAAKNSLERILTAADNLKFLISNTSEEKMTESEK 344

Query: 345 GIID------PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNAS 388
            + +       A   A+ +D NT  AI A+  L +         S+K +  +LL      
Sbjct: 345 RLFEKSSEYVEAFERAMDDDFNTADAIAAIFDLVKYMNTTADGASSKEYLQNLLDRLCLL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V KE   + +   IE+++++R    K + F+ AD IR +L +KG ILED +  
Sbjct: 405 TDVLGIIVIKEE--EMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGIILEDTREG 462

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 463 ------VKWKK 467


>gi|194366504|ref|YP_002029114.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349308|gb|ACF52431.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 458

 Score =  321 bits (823), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 184/479 (38%), Positives = 259/479 (54%), Gaps = 48/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N L R++  F  +DP+   +YVCGPTVY++ HIGNAR  +VF VL  LLR  +G  
Sbjct: 3   LRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y RNITD+DDKI   AR++   +PI    S IT +    + +D   L    P  +P 
Sbjct: 61  GLRYARNITDVDDKINNAAREQ--GVPI----STITDRFAAAYREDMAALGVAPPDIEPE 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIPQ+I +I  +I  GHAY A   ++F  SS   YG  SRR  +E   G RV    +
Sbjct: 115 VTAHIPQIITMIGQLIASGHAYPAEGHVLFAVSSFEGYGKLSRRDPEEMLAGARVDVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL FPH
Sbjct: 175 KRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA      A  W+HNG LN  G KMSKS GN   +++L+       R  P 
Sbjct: 235 HENELAQSECAHGGRIFARFWLHNGMLNFGGAKMSKSVGNIERVHDLV-------RQHPP 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSA-LYND 358
             +RLA+L  HYR+P++++   + ++   L +   T     S    +  PA + A L +D
Sbjct: 288 EALRLALLSAHYRQPLEWSDALIEQSVRTLDRLYGTLRELASVVAVVAIPATVEATLDDD 347

Query: 359 LNTVSAIQALH----------------KLARESTKNHDLLPIFNAS-AHILGIEVCKEHL 401
           LNT  A+  +                 +L  E       L +  A  A   G     +  
Sbjct: 348 LNTPQALAEVARIAADARRATDPTEQARLKGELLGAGLALGLLQADPAQWFGTAAGDDGD 407

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +      I+ L+  R    + + F+ +D IR QL ++G +LED        +  RW +K
Sbjct: 408 DAR----IQGLIDARAAAKQARDFARSDAIRDQLAAEGIVLEDTP------QGVRWSRK 456


>gi|161508769|ref|YP_001574428.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|160367578|gb|ABX28549.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 476

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 271/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 10  KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 67

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  
Sbjct: 68  GYNVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSN 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 122 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 181

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 182 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 241

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 242 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 293

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 294 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 353

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 354 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 413

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 414 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 466


>gi|153814444|ref|ZP_01967112.1| hypothetical protein RUMTOR_00656 [Ruminococcus torques ATCC 27756]
 gi|145848840|gb|EDK25758.1| hypothetical protein RUMTOR_00656 [Ruminococcus torques ATCC 27756]
          Length = 469

 Score =  321 bits (823), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/491 (38%), Positives = 263/491 (53%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  ++   ++MYVCGPTVY+F HIGNARPMI FD + R   Y   E 
Sbjct: 2   MKIYNTLSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIAFDTVRRYFEYKGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E  S         I+ +   +  KD   +     T  P 
Sbjct: 61  -VNFVSNFTDVDDKIIKKAIEEGVSA------DEISKRYIAECKKDMEAMNVKPATKNPL 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 114 ATEEICGMVEMISTLIEKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLRSGGRSLLVTG 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 174 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFLN++ +KMSKS GNF T+ E+       G  
Sbjct: 234 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVREI-------GEK 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-----------------SKWPQTSTSK 344
           +   ++R  ML  HYR P++F+ + +  A+  L                 S+   T + K
Sbjct: 286 YDLQILRFFMLSAHYRSPLNFSAELMEAAKNSLERILTAADNLKFLISNTSEEKMTESEK 345

Query: 345 GIID------PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNAS 388
            + +       A   A+ +D NT  AI A+  L +         S+K +  +LL      
Sbjct: 346 RLFEKSSEYVEAFERAMDDDFNTADAIAAIFDLVKYMNTTADGASSKEYLQNLLDRLCLL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V KE   + +   IE+++++R    K + F+ AD IR +L +KG ILED +  
Sbjct: 406 TDVLGIIVIKEE--EMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGIILEDTREG 463

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 464 ------VKWKK 468


>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 463

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/484 (39%), Positives = 264/484 (54%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+ I P  +R+YVCG T YD+ HIG+AR M+ FD + R LR+   + 
Sbjct: 1   MQIYNTLSRSKQVFEPIHPGQVRLYVCGITTYDYCHIGHARVMVAFDAITRYLRHRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKI++RA +        +A   +T++      +D   L  L P  +PR
Sbjct: 60  -VTYVRNITDIDDKILKRAEEN------GEAYDTLTARFIDAMHEDERALGVLPPDREPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ +I  G AY A N ++ F  S   +YG  S +K+++   G RV  + 
Sbjct: 113 ATQHIQDIIDLIQVLIDKGAAYTAENGDVYFSVSDFADYGKLSNKKLEDLLEGVRVELES 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK +   + GWE+PWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 173 SKRDPRDFALWKGAQQDQVGWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E  AN+W+H G + ++  KMSKS GNF TI E+LE        + 
Sbjct: 233 HHENEIAQSEAATG-ETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLE-------KYQ 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSK---GIIDPAVLSA- 354
             VIR  +L +HYR PI+++   L +A   L +      P +  +     + D + L A 
Sbjct: 285 PEVIRYFLLSSHYRSPINYSDNSLEQARAGLERLYTALRPYSDVAADEAALSDSSALQAF 344

Query: 355 ---LYNDLNTVSAIQALHKLAR-----ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
              + +D NT  A+  L  LAR     E     ++         +LG+     + +L   
Sbjct: 345 QQVMDDDFNTREALSVLFDLARQLNQQEGEAARNIAVQLKTLGRVLGLLEGDAQAYLKSG 404

Query: 405 ISIA---------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             ++         I+ L+ ER+   + K F+ AD IR QL   G  LED      G   T
Sbjct: 405 GLVSDAGSLSDDDIDALIAERIEAKQNKDFARADDIRDQLTEAGIQLED------GPAGT 458

Query: 456 RWKQ 459
           +W++
Sbjct: 459 QWRR 462


>gi|331085695|ref|ZP_08334778.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406618|gb|EGG86123.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 468

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 191/476 (40%), Positives = 253/476 (53%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K  EF  ++   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKLYNTLTKKKEEFVPLEEKKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +EH S         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEEHVSA------EEISQRYIAECKKDMEGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 113 ATQEIDGMIEMIGQLIEKGYAYEKNGTVYFRTRKFGPYGKLSHKNLDDLRSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG   DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREIAE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDP-- 349
           +   V+R  ML  HYR P++F+          ++R+  A   L      + +  + D   
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMAASKNGLERIITAAENLKYLAANAKNGEMTDAEK 344

Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                      A   A+ +D NT  AI A+ +L + +    D          LL      
Sbjct: 345 VQIQETEKFVTAFEEAMEDDFNTADAIAAIFELVKFANTTADETSSQAYDSALLERIVHL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +LGI V KE   + ++  IE L++ER    K K F  AD IR +L  KG ILED
Sbjct: 405 SDVLGIIVVKEE--ELLAEDIEALIEERQAARKAKNFQRADEIRNELLEKGIILED 458


>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 467

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 181/475 (38%), Positives = 262/475 (55%), Gaps = 55/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 3   VKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E  S P       + +K  +++  D   L     T  P+
Sbjct: 62  -VTYVQNFTDVDDKIINRSHEEGIS-P-----EEVAAKYIKEYFVDCDGLGIKRATVHPQ 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 115 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 175 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+HNG++N+   KMSKS GNF T+ ++        + +  
Sbjct: 235 HENEIAQS-EARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV-------- 351
            ++R  ML  HYR P++F+ + L +A+  L +   T      T   +++  +        
Sbjct: 287 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 346

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     + A+ +D+NT  A+  + +LA+    N D           L  FN    +
Sbjct: 347 KELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 406

Query: 392 LGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L I   K+   L+K+    IE+L+Q+R    K K+F  AD IR+QL   G +LED
Sbjct: 407 LNIVNKKKDTVLDKD----IEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLED 457


>gi|282915852|ref|ZP_06323617.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282320148|gb|EFB50493.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 471

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 271/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  
Sbjct: 63  GYNVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMEDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 461


>gi|258452738|ref|ZP_05700736.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282924443|ref|ZP_06332115.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|257859611|gb|EEV82461.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282592854|gb|EFB97858.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
          Length = 471

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 271/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  
Sbjct: 63  GYNVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 461


>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 457

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 193/486 (39%), Positives = 261/486 (53%), Gaps = 62/486 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R   +F  I P ++RMYVCG TVYD  H+G+AR ++VFD++ R LR   G +
Sbjct: 2   LKIYNSLTRAKQDFVPITPGSVRMYVCGMTVYDHCHLGHARVLVVFDLVQRWLRAS-GLR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +   SI        +T++       D   L    P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIKRALENKESI------GDLTNRFIAFMNDDAAALGVEKPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ LI  +  +G AY+  + ++ F     P YG  S + +D+ + G RV    
Sbjct: 114 ATEYVPQMLELIGRLEKNGLAYQVPDGDVNFSVRKFPGYGKLSGKALDDLRAGERVDVDG 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP W SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL FP
Sbjct: 174 TKEDPLDFVLWKHAREGEPSWPSPWGDGRPGWHIECSAMSSVLLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A +  +  N W+HNGF+ ++  KMSKS GNF TI E+L       R + 
Sbjct: 234 HHENEIAQSEGAHQC-RFVNYWMHNGFVRVDDEKMSKSLGNFCTIKEIL-------RKYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
             V+R  +L  HYR P++++   L +A   LS+   T+      DP  +           
Sbjct: 286 PEVLRFFILRAHYRSPLNYSDTHLDDARQALSRL-YTALRTANTDPPSIDWDEPHALRFR 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLL-------------------PIFNASAHILG 393
            A+ +D NT  A   L  LA E  ++                        +F  +A   G
Sbjct: 345 DAMDDDFNTPEACAVLFDLAAELNRSKSATLAGQLRGLAGLLGLLGRDPQVFLQAAPSEG 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            E+  E         IE L+ ER      K +++AD IR  L S G +LED      G  
Sbjct: 405 GELTAEQ--------IESLISERAAAKAQKDYTAADRIRADLLSAGVVLED------GAS 450

Query: 454 MTRWKQ 459
            TRW++
Sbjct: 451 GTRWRR 456


>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 473

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/493 (38%), Positives = 263/493 (53%), Gaps = 64/493 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
             D +           +A+ +D  TV A+  L +LA E  K +D  L         I+G+
Sbjct: 346 AFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKVLGGIIGL 405

Query: 395 --EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                 E L          +  I+ L+ +R      K ++ +D IR  L     ILED  
Sbjct: 406 LQRDPTEFLQGGAVSDGLSNEEIDDLIAQRKQARADKNWAESDRIRNLLNEHKIILED-- 463

Query: 447 NPDNGQRMTRWKQ 459
           N D     T W++
Sbjct: 464 NADG----TTWRR 472


>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 461

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  ++    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENSETCEQLTTRMLAEMHKDFDALNLQRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I + + +I   HAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIEMTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGI--IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +           +T KG    +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPKGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE         T  + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 --NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               N  +A IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDNDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|61216271|sp|Q7N0S5|SYC_PHOLL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 461

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 266/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHPGKVGMYVCGITIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA +       +++   +T +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRAAEN------SESCDDLTGRMLAEMYKDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L +++I  GHAY A+N +++F   S  +YG  SR+ + + + G RV    
Sbjct: 114 ATRHIQEIIALTESLIKRGHAYVADNGDVMFSVESDQDYGLLSRQDLSQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  +L  HYR  +++T   L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEDNLKQARTALERFYTALRGTDASVPPAGGEIFEARFIDA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI--EVCKEHLNKN 404
           + +D NT  A   L  + RE    K+ D      L       A ILG+  +  ++ L++ 
Sbjct: 346 MNDDFNTPEAYSVLFDMVREINRLKSEDMDAANGLAAELRKLAGILGLLQQQPEQFLHRG 405

Query: 405 IS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           I         IE L+++R    K K +  AD  R QL   G  LED      G + T W+
Sbjct: 406 IQADDEEIAKIEALIKQRNDARKNKDWPLADSARNQLNEMGIELED------GPQGTSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|226944443|ref|YP_002799516.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511824|sp|C1DHE6|SYC_AZOVD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226719370|gb|ACO78541.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 461

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 185/467 (39%), Positives = 261/467 (55%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+TL +    F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+   + 
Sbjct: 3   LSIYSTLSKGKEAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVSRWLRHSGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        ++   +  +      +D  RL  L P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIRRANEN------GESFQDLVGRMIAAMHEDEARLNVLRPDSEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +I+ +I   +AY   N ++ +       YG  SRRKI++ K+G R+    
Sbjct: 115 ATDHIAGMHAMIRTLIDKSYAYAPGNGDVYYRVGKFEGYGKLSRRKIEDLKIGARIEPGE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 175 AKEDPLDFVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ ANIW+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 235 HHENEIAQSEAATG-KRYANIWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALY 356
             V+R  ++ +HYR PI+++   L EA   L ++       P    + G    A  +A  
Sbjct: 287 PEVVRYLLVSSHYRSPINYSEDSLREARAALERFYNALKGLPAAQPTGGDEYVARFNAAM 346

Query: 357 N-DLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           N D NT  A   L +LARE    ++ DL    + +A +  +      L       ++   
Sbjct: 347 NDDFNTPEACAVLFELAREVNRLRDTDLQSAASLAARLKELGGLLGVLQLEPEAFLQAGA 406

Query: 414 QERLILLKM-------------KKFSSADYIRKQLESKGFILEDYKN 447
            +R+   ++             K ++ +D IR QL + G +LED KN
Sbjct: 407 ADRVDAAEVEALIAARLAARAGKNWAESDRIRDQLAAMGVLLEDGKN 453


>gi|154502843|ref|ZP_02039903.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
 gi|153796726|gb|EDN79146.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
          Length = 468

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 187/476 (39%), Positives = 259/476 (54%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ +   EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTMSKTKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E  +         I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKANEEGVTA------EEISKRYIEECKKDMEGMNVKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEIGGMIDMIQTLIDKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLQSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  +  +  W+HNGFLN++ RKMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEAANG-KDFSKYWLHNGFLNIDNRKMSKSLGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------------ILLSKWPQTSTSK-- 344
           +   V+R  ML  HYR P++F+ + +  A+               +L     +  T K  
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLERIVTAAEHLKFLLEGAKTENMTEKEQ 344

Query: 345 -GIIDPAVLS-----ALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNAS 388
             I+     +     A+ +D NT  AI A+  L +        ES+K +  +LL    A 
Sbjct: 345 AKIVKSQEFTRKFEKAMDDDFNTADAIAAVFDLVKFINTNTDGESSKEYLQNLLSQLVAL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LGI V KE   + ++  IE L+ ER    K + F+ AD IR +L +KG ILED
Sbjct: 405 TDVLGIIVEKEQ--EMLADDIEALIAERQAARKERNFARADEIRDELLAKGIILED 458


>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 473

 Score =  321 bits (822), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/480 (39%), Positives = 260/480 (54%), Gaps = 58/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +
Sbjct: 2   LNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----E 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  
Sbjct: 57  CGYPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDI 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +P+AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV 
Sbjct: 111 EPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVE 170

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL
Sbjct: 171 VDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADL 230

Query: 241 IFPHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            FPHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF
Sbjct: 231 QFPHHENEIAQSVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNF 290

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STS 343
            TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T 
Sbjct: 291 FTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTP 343

Query: 344 KGIID---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHIL 392
               D             +A+ +D  TV A+  L +LA E  K +D  L     A   I+
Sbjct: 344 AAKFDLFENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGII 403

Query: 393 G------IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G      IE  +   ++  +S   I+ L+  R      K ++ +D IR  L     ILED
Sbjct: 404 GLLQRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 461

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY  AN +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +         +          +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE         T  + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADGDEVAKIEALIKQRNDARTSKDWALADSARDQLNELGIVLED------GPQGTVWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|283469822|emb|CAQ49033.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 466

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
 gi|239999926|ref|ZP_04719850.1| CysS [Neisseria gonorrhoeae 35/02]
 gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
 gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
 gi|240081823|ref|ZP_04726366.1| CysS [Neisseria gonorrhoeae FA19]
 gi|240114660|ref|ZP_04728722.1| CysS [Neisseria gonorrhoeae PID18]
 gi|240116861|ref|ZP_04730923.1| CysS [Neisseria gonorrhoeae PID1]
 gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
 gi|240122495|ref|ZP_04735451.1| CysS [Neisseria gonorrhoeae PID332]
 gi|240127206|ref|ZP_04739867.1| CysS [Neisseria gonorrhoeae SK-93-1035]
 gi|260441533|ref|ZP_05795349.1| CysS [Neisseria gonorrhoeae DGI2]
 gi|81311142|sp|Q5F5D6|SYC_NEIG1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 473

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 259/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 346 EFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 405

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|310766910|gb|ADP11860.1| Cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 462

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 194/485 (40%), Positives = 265/485 (54%), Gaps = 53/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--YYG 62
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY  Y+ 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYH- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + YVRNITDIDDKII+RA +        ++I  +T++   +  +D   L  L P  +
Sbjct: 61  ---LKYVRNITDIDDKIIKRANEN------GESIERLTNRMIDEMHQDFAALNILPPDLE 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I L++ +I   HAY A+N +++F   S P YGS SR+ +D+ + G RV  
Sbjct: 112 PRATRHIAEIIELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEV 171

Query: 182 KYH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 172 AADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 231

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L+       
Sbjct: 232 MFPHHENEIAQSTCA-HDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQ------- 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGI--IDPAV 351
            + A  +R  ++  HYR  +++    L +A        I L      +T  G    +   
Sbjct: 284 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI--EVCKEHL 401
             A+ +D NT  A  AL  LARE    K  D      L         +LG+  +  ++ L
Sbjct: 344 REAMDDDFNTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPEQFL 403

Query: 402 NKNISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              ++I       IE L+Q R+   K K ++ AD  R +L   G +LED      G   T
Sbjct: 404 QSGVNINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGT 457

Query: 456 RWKQK 460
           RW++K
Sbjct: 458 RWRRK 462


>gi|240114101|ref|ZP_04728591.1| CysS [Neisseria gonorrhoeae MS11]
 gi|240126656|ref|ZP_04739542.1| CysS [Neisseria gonorrhoeae SK-92-679]
          Length = 473

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 259/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 346 EFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 405

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|294788619|ref|ZP_06753861.1| cysteine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483496|gb|EFG31181.1| cysteine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 475

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 178/468 (38%), Positives = 259/468 (55%), Gaps = 54/468 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R+   F+ IDP N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +     +
Sbjct: 4   LYNTLTRQKERFEPIDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQH--GYPL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA Q        + I  +T +  Q   +D+  L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARANQN------GETIQQLTERFIQAMNEDSQALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            HI QMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 EHIAQMIQMIEKLIENGKAYPAENGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK + P EP W SPWG GRPGWHIECSAM     G+ FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKPEEPSWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQSC A+               +I+     W+HNGF+ ++  KMSKS GNF TI +
Sbjct: 236 ENEIAQSCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRD 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +   I+  
Sbjct: 296 VL-------KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPIEFK 348

Query: 351 V-------------LSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGI- 394
           +              +A+ +D  T  A+  L ++A E+ KN   +L         +LG+ 
Sbjct: 349 LDSNGNNNDYTHKFFNAMNDDFGTAEAVSVLFEIANEANKNDSAELSGCLKTLGGVLGLL 408

Query: 395 -EVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  ++ L    ++       I KL+ +R I  + K ++ +D IR  L
Sbjct: 409 QDNPEQFLQGGNNVDGLSADEINKLISQRKIARETKNWAESDRIRDIL 456


>gi|254555716|ref|YP_003062133.1| cysteine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|254044643|gb|ACT61436.1| cysteine-tRNA ligase [Lactobacillus plantarum JDM1]
          Length = 470

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 186/479 (38%), Positives = 262/479 (54%), Gaps = 59/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   LSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T 
Sbjct: 57  CGYHVDYVSNFTDVDDKLIKRAAEDHTTVPA------VADRFIKAFMEDTTAVNIEPATV 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----T 177
            PRA+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G    T
Sbjct: 111 HPRASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHT 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K++P DF LWK + P E  WESPWG GRPGWHIECS MS+ YLG  FDIHGGG
Sbjct: 171 ADEETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
            DL FPHHENEIAQS    +  KT AN W+HNGF+ +  +  KMSKS GNF+T++++++T
Sbjct: 231 QDLEFPHHENEIAQSEA--KTGKTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKT 288

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGI 346
                      V+R  M  T YR PI +T   L EA   L K              +   
Sbjct: 289 VD-------PQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNG 341

Query: 347 IDPAVLSAL--------------YNDLNTVSAIQALHKL-----ARESTKNHDLLPIFNA 387
            D AV   L              +N  N V+A+  L KL     A+ + +   L+ +  A
Sbjct: 342 TDTAVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQKA 401

Query: 388 SAHILGI-EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + G+  V  E  N  ++  AI+ L+ ER    K K F+ AD IR  L+++G ILED
Sbjct: 402 LVQLTGVFGVTFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILED 460


>gi|255021318|ref|ZP_05293366.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969181|gb|EET26695.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 471

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 192/482 (39%), Positives = 262/482 (54%), Gaps = 53/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I++++E +      + P  + +YVCG TVYDF H+G+AR M+ FD + R LR    E 
Sbjct: 8   IHIHDSMEGRKLPLSLVQPGKVGIYVCGMTVYDFCHLGHARVMVTFDTVVRYLRARGLE- 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + +  +T +      +D   L C+APT +PR
Sbjct: 67  -VTYVRNITDIDDKIIRRAAER------GEGLDSLTQRFIDAMHEDEVALGCIAPTVEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ QM+ LI+ ++  GHAY   N ++ +   S P YG  S R ++E   G RV    
Sbjct: 120 ATQHVGQMLELIETLVRRGHAYAPGNGDVYYAVRSFPAYGRLSGRSLEELHSGARVEPGE 179

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG  FDIHGGG DL+FP
Sbjct: 180 DKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSQETLGCRFDIHGGGADLLFP 239

Query: 244 HHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           HHENEIAQS    CA      A  W+HNGF+ ++  KMSKS GNF  + +LL    +GG 
Sbjct: 240 HHENEIAQSQGAGCA-----FAQHWMHNGFVRIDEEKMSKSLGNFRLVRDLLPI--YGGE 292

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGII------DPA 350
                V+R  +L +HYR P++F+ + L +A   L++      +     G I       P 
Sbjct: 293 -----VLRFFILNSHYRSPLNFSEKLLEQARSGLTRLYTALRELPDDDGSILPEDSWGPR 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-------ILGI-EVCKEHLN 402
             SA+ +D +T  A+  L  LARE  +  D    F A A        +LGI +   E   
Sbjct: 348 FHSAMADDFHTPEALAVLFDLAREINRRRDAGEPFAALARRLRELGAVLGILQRRPEDFL 407

Query: 403 KNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +  +       IE  +  R    + + F+ AD +RK+LE  G +LED      G   T W
Sbjct: 408 RGDAAGIDVDWIEGRIAARAAARRERNFAEADRLRKELEECGILLED------GPGGTTW 461

Query: 458 KQ 459
           +Q
Sbjct: 462 RQ 463


>gi|194099737|ref|YP_002002872.1| CysS [Neisseria gonorrhoeae NCCP11945]
 gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
 gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 475

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 259/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 6   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 60

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P  +P
Sbjct: 61  YPLTYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 115 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 175 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 235 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 294

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 295 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 347

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 348 EFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 407

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   IE L+  R      K ++ +D IR  L     ILED
Sbjct: 408 LQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 465


>gi|88941991|sp|Q65UY1|SYC_MANSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 458

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 189/478 (39%), Positives = 268/478 (56%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRALEN------NETCDQLVERMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   E   N W+H G L +   KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDIL-------TKYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA-------VLSAL 355
           A  +R   L   YR  +D++ + +  A   L + +      + +  PA         +A+
Sbjct: 286 AESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCETVEIPAEDQYVIDFKTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI--EVCKEHLNKNI 405
            +D NT  A+  L +LARE         TK + L       A +LG+  +  +  L  + 
Sbjct: 346 DDDFNTPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQGDA 405

Query: 406 SIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + A    IE L++ R      K +++AD  R +L + G +LED      G + T W++
Sbjct: 406 ADAEVSKIEALIKRRNEARAAKDWAAADAARNELTAMGVVLED------GAKGTTWRK 457


>gi|300769737|ref|ZP_07079619.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300492645|gb|EFK27831.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 506

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 186/479 (38%), Positives = 262/479 (54%), Gaps = 59/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 38  LSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEY----- 92

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T 
Sbjct: 93  CGYHVDYVSNFTDVDDKLIKRAAEDHTTVPA------VADRFIKAFMEDTTAVNIEPATV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----T 177
            PRA+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G    T
Sbjct: 147 HPRASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHT 206

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K++P DF LWK + P E  WESPWG GRPGWHIECS MS+ YLG  FDIHGGG
Sbjct: 207 ADEETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGG 266

Query: 238 LDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
            DL FPHHENEIAQS    +  KT AN W+HNGF+ +  +  KMSKS GNF+T++++++T
Sbjct: 267 QDLEFPHHENEIAQSEA--KTGKTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKT 324

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGI 346
                      V+R  M  T YR PI +T   L EA   L K              +   
Sbjct: 325 VD-------PQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNG 377

Query: 347 IDPAVLSAL--------------YNDLNTVSAIQALHKL-----ARESTKNHDLLPIFNA 387
            D AV   L              +N  N V+A+  L KL     A+ + +   L+ +  A
Sbjct: 378 TDTAVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQEA 437

Query: 388 SAHILGI-EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + G+  V  E  N  ++  AI+ L+ ER    K K F+ AD IR  L+++G ILED
Sbjct: 438 LVQLTGVFGVTFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILED 496


>gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 461

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY  AN +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLVY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +         +          +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE         T  + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTVWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|197301390|ref|ZP_03166471.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
           29176]
 gi|197299547|gb|EDY34066.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
           29176]
          Length = 468

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 186/476 (39%), Positives = 262/476 (55%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ ++  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTMSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKNYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E  +         I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKANEEGVTA------EEISKRYIEECKKDMEGMNIQPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I+ +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEIGGMISMIETLIEKGYAYEKNGTVYYRTRKFAEYGKLSHKNLDDLQSGGRALLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP W+SPWG GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWKSPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNRKMSKSLGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPA---------- 350
           +   V+R  ML  HYR P++F+ + +  A+  L +    + + K +I+ A          
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLERITTAAENLKFLINNARTEDMSEDER 344

Query: 351 ------------VLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNAS 388
                          A+ +D NT  AI A+ +L +         S+K +  +L       
Sbjct: 345 KKLAGSIAYVENFEKAMDDDFNTADAISAVFELVKYMNTTTDGASSKEYLQNLFDCLIRL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LGI V KE  ++ ++  IE L++ER    K K F+ AD IR +L +KG IL+D
Sbjct: 405 TDVLGIIVDKE--DEILASDIEALIEERQAARKAKNFARADEIRDELLAKGIILKD 458


>gi|257795372|ref|ZP_05644351.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258408941|ref|ZP_05681222.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420421|ref|ZP_05683364.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258439342|ref|ZP_05690274.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444082|ref|ZP_05692419.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446350|ref|ZP_05694508.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448443|ref|ZP_05696558.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258453799|ref|ZP_05701773.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282894964|ref|ZP_06303187.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282928866|ref|ZP_06336457.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|257789344|gb|EEV27684.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840292|gb|EEV64755.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843611|gb|EEV68017.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257847679|gb|EEV71678.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850752|gb|EEV74697.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854944|gb|EEV77889.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858312|gb|EEV81199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257864055|gb|EEV86809.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282589474|gb|EFB94563.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282762646|gb|EFC02783.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
          Length = 471

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 270/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  
Sbjct: 63  GYNVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 461


>gi|52424677|ref|YP_087814.1| cysteinyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|52306729|gb|AAU37229.1| CysS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 476

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/478 (39%), Positives = 268/478 (56%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY   + 
Sbjct: 20  LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGYD- 78

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 79  -LRYVRNITDVDDKIIKRALEN------NETCDQLVERMIAEMHKDFDALNILRPDVEPR 131

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 132 ATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 191

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 192 VKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMFP 251

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   E   N W+H G L +   KMSKS  NF TI ++L         + 
Sbjct: 252 HHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDIL-------TKYD 303

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA-------VLSAL 355
           A  +R   L   YR  +D++ + +  A   L + +      + +  PA         +A+
Sbjct: 304 AESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCETVEIPAEDQYVIDFKTAM 363

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI--EVCKEHLNKNI 405
            +D NT  A+  L +LARE         TK + L       A +LG+  +  +  L  + 
Sbjct: 364 DDDFNTPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQGDA 423

Query: 406 SIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + A    IE L++ R      K +++AD  R +L + G +LED      G + T W++
Sbjct: 424 ADAEVSKIEALIKRRNEARAAKDWAAADAARNELTAMGVVLED------GAKGTTWRK 475


>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
          Length = 465

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 181/475 (38%), Positives = 262/475 (55%), Gaps = 55/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 1   MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E  S P       + +K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIINRSHEEGIS-P-----EEVAAKYIKEYFVDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+HNG++N+   KMSKS GNF T+ ++        + +  
Sbjct: 233 HENEIAQS-EARSGKIFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV-------- 351
            ++R  ML  HYR P++F+ + L +A+  L +   T      T   +++  +        
Sbjct: 285 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     + A+ +D+NT  A+  + +LA+    N D           L  FN    +
Sbjct: 345 KELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 404

Query: 392 LGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L I   K+   L+K+    IE+L+Q+R    K K+F  AD IR+QL   G +LED
Sbjct: 405 LNIVNKKKDTVLDKD----IEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLED 455


>gi|57634618|ref|NP_371054.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
          Length = 476

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 270/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 10  KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 67

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  
Sbjct: 68  GYNVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSN 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 122 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 181

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 182 EHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 241

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 242 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 293

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 294 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 353

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 354 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 413

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 414 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 466


>gi|283769685|ref|ZP_06342577.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283459832|gb|EFC06922.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 471

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 271/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  
Sbjct: 63  GYNVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMEDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGILSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 461


>gi|160947200|ref|ZP_02094367.1| hypothetical protein PEPMIC_01133 [Parvimonas micra ATCC 33270]
 gi|158446334|gb|EDP23329.1| hypothetical protein PEPMIC_01133 [Parvimonas micra ATCC 33270]
          Length = 461

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 190/473 (40%), Positives = 265/473 (56%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  +F+ I      +YVCGPTVY++ HIGN+RPMIV+D L R L Y   + 
Sbjct: 1   MKIYNTLTRKKEDFKPIQAGKALIYVCGPTVYNYIHIGNSRPMIVYDTLRRYLLYIGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQP 123
            V +V N TDIDDKII RA++E+  +P  D    IT K    +++D+  L    + T  P
Sbjct: 60  -VKFVSNFTDIDDKIINRAKEEN--VPFTD----ITKKYIDAYLEDSYGLNLFESHTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT  I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATECINEMIEFVKVLEEKGIAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDISD 172

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK R    EP WESPWG GRPGWH+ECS M+  YLG   DIH GG DL F
Sbjct: 173 EKKNPLDFALWKKRKDETEPAWESPWGMGRPGWHLECSVMAKKYLGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQS CC  ++   AN W+HNG +N++  KMSKS GNF TI ++        + 
Sbjct: 233 PHHENEIAQSECCNGKV--FANYWMHNGMINIDNVKMSKSKGNFFTIKDI-------QKE 283

Query: 302 WPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSK--GIIDP 349
           +   VIRL +L THYR P++F+          + R+   +  L +  +    K  G I  
Sbjct: 284 YDLEVIRLWILSTHYRNPLNFSREVMEQTKNGLDRMYNGKEHLERLLEICEEKEDGDISK 343

Query: 350 AV------LSALYNDLNTVSAIQALHKLAREST---KNHDL------LPIFNASAHILGI 394
            V      L  + +DLNT  AI  +++L R +    +N DL      + + +  A +LG+
Sbjct: 344 LVELKKEFLDCMDDDLNTADAISKVYELIRYTNTFGENTDLKVVKGAVKLLSDFASVLGL 403

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +E  + N+   +EKL++ER    K K F  AD IR  L+     L+D +N
Sbjct: 404 LYKEE--DDNLDEKVEKLIKEREEARKNKDFKRADEIRDALKEMNIELKDTRN 454


>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226735044|sp|B7GJ46|SYC_ANOFW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 465

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 183/487 (37%), Positives = 268/487 (55%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F  ++P+ ++MYVCGPTVY++ HIGNARP IVFD + R L++   E 
Sbjct: 3   IQVYNTLTRKKEPFIPLEPNKVKMYVCGPTVYNYIHIGNARPAIVFDTIRRYLQFRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+    +P       I  +  + + +D T L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIRAARELGEDVPT------IAERFIEAYFEDITALGCKKADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  I+ +I  G+AYE + ++ + T    +YG  S + +DE K G R+     
Sbjct: 115 VTENIDTIIQFIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSVDELKSGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFALWKAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNFI +++++       +    
Sbjct: 235 HENEIAQSEALTG-KPFAKYWLHNGYINIDNEKMSKSLGNFILVHDII-------KQVDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
            V+R  ML  HYR PI+++          ++RL  A   L    ++ST+    D   L+ 
Sbjct: 287 QVLRFFMLSVHYRHPINYSQPLLESARSGLERLKTAYANLKHRLESSTNLTTNDEQWLAK 346

Query: 355 LY-----------NDLNTVSAIQALHKLAREST----KNHD-------LLPIFNASAHIL 392
           +            +D NT + I  L +LA+++     +NH         L  F     +L
Sbjct: 347 IEELRNEFIREMDDDFNTANGIAVLFELAKQANVYLMENHTSQQVIQAFLQQFEQLFDVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + ++ L   +   IE L+Q+R+   K + F+ AD IR +L++K  ILED   P    
Sbjct: 407 GLSLQQDEL---LDEEIEALIQQRIEARKNRDFALADRIRDELKAKNIILED--TPQG-- 459

Query: 453 RMTRWKQ 459
             TRW++
Sbjct: 460 --TRWRR 464


>gi|253731134|ref|ZP_04865299.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725099|gb|EES93828.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 466

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKIANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
          Length = 477

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 261/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  I+P N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY A N+++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 346 EFDLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 405

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   IE L+  R      K ++ +D IR  L     ILED
Sbjct: 406 LQRDPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILED 463


>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
 gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|109894913|sp|Q3J8Y9|SYC_NITOC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 485

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 188/490 (38%), Positives = 270/490 (55%), Gaps = 66/490 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+  EF  I+   +RMYVCG TVYD  H+G+AR M+VFD++ R LR    E 
Sbjct: 2   LRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        ++I  +T++  Q   +D   L  L P  +PR
Sbjct: 61  -VIYVRNITDIDDKIIHRANER------GESIHTLTARYIQALHEDEASLQILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  ++ +++ ++  G+AY+  N +I +D S    YG+ S R +++ + G RV    
Sbjct: 114 ATESMEAILAMVRQLLDQGYAYQGENGDIYYDVSHFEGYGALSGRHLEDLRAGERVQVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKSGEPAWESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A    K  N W+HNGF+ L   KMSKS GNF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-GKFVNYWMHNGFVRLNDEKMSKSLGNFFTVREVLE-------HYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGII------ 347
             V+R  +L +HYR P+++T Q+L  A+  +++              ++++G+       
Sbjct: 286 PEVLRYFILSSHYRSPLNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLSWEFTDG 345

Query: 348 -DPAVL---SALYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFNASAHILGI 394
            DP VL    A+ +D NT  A+  L+++         A ++ K   L  +  +   ILG+
Sbjct: 346 GDPFVLRFREAMDDDFNTPEALALLNEVRHALNRAREAGDTEKGQSLAVLLRSLGGILGL 405

Query: 395 EVC--KEHLNKNISIA------------------IEKLVQERLILLKMKKFSSADYIRKQ 434
                ++ L  +  +A                  IE+LV +R +  K K ++ AD IR  
Sbjct: 406 LAHEPEQFLRDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDWAEADRIRGI 465

Query: 435 LESKGFILED 444
           L+ +G  LED
Sbjct: 466 LKDQGITLED 475


>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|109894926|sp|Q1QC19|SYC_PSYCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 488

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 185/487 (37%), Positives = 267/487 (54%), Gaps = 63/487 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ IY++L  +   F+ +    + MYVCG TVYD+ HIG+AR M+ FD+  R L     +
Sbjct: 13  QLVIYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGYD 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITDIDDKII RA +        + I  +T +      +D T L CL+P  +P
Sbjct: 73  --VNYVRNITDIDDKIITRAAEN------GEEIGTLTQRFITAMHEDATALGCLSPDAEP 124

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT+HI +M  +I+ ++ + +AY  +N ++ +   S  +YG  S+R +D+ + G+RV  +
Sbjct: 125 RATDHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVE 184

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK + P EP W S WG+GRPGWHIECSAMS+  LG  FDIHGGG DL F
Sbjct: 185 NDKRNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQF 244

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   E   N W+H GF+N++G KMSKS GNF TI +++         +
Sbjct: 245 PHHENEIAQSEAATGCEYARN-WMHVGFINVDGEKMSKSLGNFFTIRDVMA-------KY 296

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKG---IIDPAVLS-- 353
               +R  +L +HYR  ++F+   L E+   LS+  Q        KG   IID A+++  
Sbjct: 297 LPETVRFFLLSSHYRSQVNFSDSALDESHNSLSRLYQALKVAEQQKGKVLIIDEALINNA 356

Query: 354 -----------ALYNDLNTVSAIQALHKLARE---STKNHDLLPIFNASAHILGI----- 394
                      A+ +D N+ +AI  L  LAR+   ++K  D+   +  + H+  +     
Sbjct: 357 YASAVGQDFIKAMNDDFNSSTAISVLFGLARDINKASKAQDVETAWQLAQHLKALAQTLN 416

Query: 395 ---------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                          EV ++ L      AI+ L+ ER      K F+ AD IR QL+  G
Sbjct: 417 ILQQPVQQFLQAVIGEVAEDSLTDE---AIDGLIIERADAKTNKNFARADEIRVQLKEAG 473

Query: 440 FILEDYK 446
             LED +
Sbjct: 474 IELEDSR 480


>gi|330817521|ref|YP_004361226.1| Cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369914|gb|AEA61270.1| Cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 464

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 187/468 (39%), Positives = 255/468 (54%), Gaps = 42/468 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ HIG+AR M+VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMMVVFDIVQRWLRQL-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +TS+      +D   L    P H+
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIGELTSRFIAAMHEDLDALGVERPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT++IPQM+ +I  +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATHYIPQMLGMIAALEANGYAYQAKDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P EP    W+S +GRGRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKRAKPEEPADTSWDSKYGRGRPGWHIECSAMGCTLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNTWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPA---- 350
              + A V+R  +  THYR P++++   L +A   L++        +     +DP     
Sbjct: 288 --KYDAEVVRFFIARTHYRSPLNYSEVHLDDARAALTRLYTALKDVTPDGAPLDPDEPHA 345

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNA----------SAHILGIEV 396
               +A+ +D NT  A+  L +LA E  +  D  L   F             A     + 
Sbjct: 346 QRFAAAMNDDFNTALAVSVLFELAGEVNRTRDAALARQFKQLGALLGLLGRDARAFLQQA 405

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                +     AIE  + ER+   + K ++ AD IR  L   G  LED
Sbjct: 406 TGAGADALDGEAIEACIAERVAAKQAKNYAEADRIRAALLEAGVALED 453


>gi|257424643|ref|ZP_05601070.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427311|ref|ZP_05603710.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429947|ref|ZP_05606331.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432649|ref|ZP_05609009.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435553|ref|ZP_05611601.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903117|ref|ZP_06311008.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904907|ref|ZP_06312765.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907857|ref|ZP_06315692.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910170|ref|ZP_06317974.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913362|ref|ZP_06321151.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918317|ref|ZP_06326054.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923279|ref|ZP_06330959.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957327|ref|ZP_06374780.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500408|ref|ZP_06666259.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509353|ref|ZP_06668064.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293523940|ref|ZP_06670627.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257272213|gb|EEV04336.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275504|gb|EEV06977.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279144|gb|EEV09745.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282064|gb|EEV12199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284744|gb|EEV14863.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314147|gb|EFB44537.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317451|gb|EFB47823.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322394|gb|EFB52716.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325562|gb|EFB55870.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328241|gb|EFB58519.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331732|gb|EFB61243.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596072|gb|EFC01033.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790778|gb|EFC29593.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920903|gb|EFD97964.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095413|gb|EFE25674.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467450|gb|EFF09965.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
          Length = 471

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 178/473 (37%), Positives = 270/473 (57%), Gaps = 47/473 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--Q 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++ + ++P       I  K    F +D   L     T  
Sbjct: 63  GYNVEYVSNFTDVDDKLIKRSQELNQTVPE------IAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID 348
              V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 349 --PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHI 391
              A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ +  +  ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 409 LGVPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 461


>gi|330998823|ref|ZP_08322550.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329576037|gb|EGG57556.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 464

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 190/460 (41%), Positives = 263/460 (57%), Gaps = 29/460 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R +  F++I P  + MYVCG TVYD  HIG+ R  I FDV  R L+    + 
Sbjct: 3   LKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TD+DDKII+RA  E   +P     S +    T++  +D   L CL P+ +PR
Sbjct: 62  -VKFVRNVTDVDDKIIKRA-AERKILP-----SELAETYTKRMQEDLGELGCLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IP+M+ LI+ +   G+AY+  N ++ F       YG+ S +K+DE + G RV  + 
Sbjct: 115 ATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSGKKVDELQPGERVRVEE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWKR+ P EP W+S WG+GRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 175 AKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDLMFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-ETKKFGGRSW 302
           HHENEIAQS  A+  +K  N W+H+G L + G KMSKS GNF TI + L ET    G   
Sbjct: 235 HHENEIAQSEAANG-KKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGDKN 293

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEA-EILLSKWPQTSTSKGIIDP---------AVL 352
               +R  +L +HYR PIDF+   + +A + L+  +     +    +P            
Sbjct: 294 GNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADDNPLDWNEKYAAQFK 353

Query: 353 SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI------EVCKEHLNKN 404
            A+ +D NT  A+  L +LA+E   TK+ +L         +LGI         K  ++  
Sbjct: 354 EAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLDPEAFVKGAVDSV 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              A+E L+ ER      K ++ AD IRK+L  K  +LED
Sbjct: 414 DEAAVEALIAERKAAKAAKNWARADEIRKELLEKNIVLED 453


>gi|331082990|ref|ZP_08332109.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330399727|gb|EGG79388.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 468

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 189/478 (39%), Positives = 262/478 (54%), Gaps = 58/478 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +K  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R + Y   E 
Sbjct: 1   MRIYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E  S         I+S+  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIAKAVEEGVSA------EEISSRYIKECKKDMADMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ ++  G AYE N  + F   +   YG  S + +++ + G R   V  
Sbjct: 113 ATQEIDGMIDMIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 ENQKEDPLDFVLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLV 232

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQS CC  +  + A  W+HN FLN++ RKMSKS GNF T+ E+       G 
Sbjct: 233 FPHHENEIAQSECCNGK--QFARYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GE 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-----------------SKWPQTSTS 343
            +   V+R  ML  HYR P++F+ + +  ++  L                  K   T T 
Sbjct: 284 KYDLQVLRFFMLNAHYRSPLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTETE 343

Query: 344 KGIIDPAVL-------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFNASA 389
           K  ++  VL       +++ +D NT  AI A+ +L       A E++    +  +F+   
Sbjct: 344 KA-LEVEVLEYVKKYENSMEDDFNTADAIAAIFELVKFANTKANENSTAAFVQYLFDTIV 402

Query: 390 H---ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           H   +LG+ V KE   + +   IEKL++ER +  K K F  AD IR +L + G IL+D
Sbjct: 403 HLSDVLGLIVNKEA--EILDEEIEKLIEERQMARKEKNFKRADEIRDELAAMGIILKD 458


>gi|57651406|ref|YP_185462.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160084|ref|YP_493218.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194292|ref|YP_499084.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220704|ref|YP_001331526.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|262049572|ref|ZP_06022441.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262052418|ref|ZP_06024618.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|284023539|ref|ZP_06377937.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294850305|ref|ZP_06791039.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|61216110|sp|Q5HIE5|SYC_STAAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894946|sp|Q2FJB0|SYC_STAA3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123291881|sp|Q2G2M6|SYC_STAA8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|172048774|sp|A6QEI2|SYC_STAAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631648|sp|A8YZM7|SYC_STAAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57285592|gb|AAW37686.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126058|gb|ABD20572.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201850|gb|ABD29660.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150373504|dbj|BAF66764.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|259159664|gb|EEW44708.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162312|gb|EEW46885.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|294822817|gb|EFG39252.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302332243|gb|ADL22436.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|315196659|gb|EFU27006.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141606|gb|EFW33445.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320141766|gb|EFW33594.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329731047|gb|EGG67420.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 466

 Score =  320 bits (820), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|330810612|ref|YP_004355074.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378720|gb|AEA70070.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 460

 Score =  320 bits (819), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 264/478 (55%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDI+DKII RAR+        +    +T +  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIEDKIINRAREN------GEPYDALTERMIKAMHEDEARLNILKPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M+ +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALY 356
             V+R  ++ +HYR  I+++   L +A+  L ++       P    + G    A  + + 
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVPAAGGEAFVARFTEVM 345

Query: 357 N-DLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
           N D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR QL + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLTARANKDWAESDRIRDQLTAMGVVLED------GKGGTTWR 457


>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 483

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 257/482 (53%), Gaps = 58/482 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K + +YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R L     
Sbjct: 10  KMLNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLC---- 65

Query: 63  EKC---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
            +C   +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P
Sbjct: 66  -ECGYPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRP 118

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             +P+AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G R
Sbjct: 119 DIEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGER 178

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG 
Sbjct: 179 VEVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGA 238

Query: 239 DLIFPHHENEIAQSCCA---------------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           DL FPHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS G
Sbjct: 239 DLQFPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLG 298

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--- 340
           NF TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T   
Sbjct: 299 NFFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKN 351

Query: 341 --------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAH 390
                   S +         +A+ +D  TV A+  L +LA E  K +D  L     A   
Sbjct: 352 TPAAEFELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAYLAGCLKALGG 411

Query: 391 ILGI--EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           I+G+      E L          +  IE L+ +R      K ++ +D IR  L     IL
Sbjct: 412 IIGLLQRDPTEFLQGGAVSDGLSNEEIEDLIAQRKQARSDKNWAESDRIRDLLNEHKIIL 471

Query: 443 ED 444
           ED
Sbjct: 472 ED 473


>gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 184/500 (36%), Positives = 265/500 (53%), Gaps = 75/500 (15%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNT+ ++    + +    + MYVCG T YD +H+G+ R  + FDVLYR L++   E
Sbjct: 6   ELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGYE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRN TD+DDKII RA +      + +    ++S   Q+++ D T L CL+PTHQP
Sbjct: 66  --VTYVRNFTDVDDKIIRRANE------LGENPLTLSSHFCQEYLDDMTDLHCLSPTHQP 117

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK++  + G RV    
Sbjct: 118 RVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDS 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   FDIHGGG+DLIFP
Sbjct: 178 RKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSC A + E   + W+HNG +     KMSKS GNF TI ++ +        + 
Sbjct: 238 HHENEIAQSCAACQ-ESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL-------YH 289

Query: 304 APVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSKGIIDP 349
              +R  +L THYR P+++++              Q L + E  LS + + +     I P
Sbjct: 290 PLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCIAP 349

Query: 350 AV-----------LSALYNDLNT-------------------------------VSAIQA 367
           A             + + +DL+T                               +SA+++
Sbjct: 350 AAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVES 409

Query: 368 LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKK 424
           L KL +E      +L + +  A+   ++  K    K    I   +  L++ER +  K K 
Sbjct: 410 LTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKD 469

Query: 425 FSSADYIRKQLESKGFILED 444
           FS  D IR  L SKG  L D
Sbjct: 470 FSKGDQIRADLASKGIALMD 489


>gi|260589563|ref|ZP_05855476.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540131|gb|EEX20700.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 468

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 185/477 (38%), Positives = 262/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +K  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R + Y   E 
Sbjct: 1   MRIYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E  S         I+S+  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIAKAVEEGVSA------EEISSRYIKECKKDMADMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ ++  G AYE N  + F   +   YG  S + +++ + G R   V  
Sbjct: 113 ATQEIDGMIDMIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 ENQKEDPLDFVLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLV 232

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQS CC  +  + A  W+HN FLN++ RKMSKS GNF T+ E+       G 
Sbjct: 233 FPHHENEIAQSECCNGK--QFARYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GE 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTSTSK 344
            +   V+R  ML  HYR P++F+ + +  ++  L +                  + +  +
Sbjct: 284 KYDLQVLRFFMLNAHYRSPLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTAEE 343

Query: 345 GIIDPAVL-------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFNASAH 390
             ++  VL       +++ +D NT  AI A+ +L       A E++    +  +F+   H
Sbjct: 344 KALEAEVLEYVKKYENSMEDDFNTADAIAAIFELVKFANTKANENSTAAFVQYLFDTIVH 403

Query: 391 ---ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +LG+ V KE   + +   IEKL++ER +  K K F  AD IR +L + G IL+D
Sbjct: 404 LSDVLGLIVNKEA--EILDEEIEKLIEERQMARKEKNFKRADEIRDELATMGIILKD 458


>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 473

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 257/482 (53%), Gaps = 66/482 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  I+P N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 4   IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 58

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 59  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +G AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT--- 342

Query: 348 DPAV---------------LSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAH 390
            PAV                +A+ +D  TV A+  L +LA E  K +D  L     A   
Sbjct: 343 -PAVAFELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGG 401

Query: 391 ILGI--EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           I+G+      E L          +  IE L+  R      K ++ +D IR  L     IL
Sbjct: 402 IIGLLQRDPTEFLQGGAVSDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIIL 461

Query: 443 ED 444
           ED
Sbjct: 462 ED 463


>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 466

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 187/473 (39%), Positives = 253/473 (53%), Gaps = 50/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+  K  EF  I+   ++MY CGPTVY++ HIGNARP IVFDVL   L Y   E 
Sbjct: 1   MKIYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII++A +E  S     AI +   K   ++ KD   +     T  PR
Sbjct: 60  -VTFVQNFTDVDDKIIKKANEEGIS-----AIEV-ADKYIDEYYKDAAAIGIRKATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I ++I  IQ++I  G AY    ++ F+      YG  S + IDE   G R+     
Sbjct: 113 VTENIKEIIGFIQDLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGARIDVNEQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK     E GW+SPWG GRPGWHIECS MS+ YLG   DIH GG DLIFPH
Sbjct: 173 KKSPLDFALWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     AN W+HNG++N++  KMSKS GNF T+ ++L       + +  
Sbjct: 233 HENEIAQSECKNGC-TFANYWMHNGYINIDNVKMSKSLGNFFTVRDVL-------KVYDG 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI-------- 346
            V+R  ML +HYR PI+++   L  A+  L +            Q S  K +        
Sbjct: 285 DVLRFFMLTSHYRSPINYSKDLLDSAKSSLDRIKNCKSSLDFSLQKSQDKEVSQEEKDIL 344

Query: 347 -----IDPAVLSALYNDLNTVSAIQA---LHKLARESTKNH-------DLLPIFNASAHI 391
                I    +  + +DLNT  AI A   L KLA  S   +        +L + N    +
Sbjct: 345 ENVQAIKSTFIEKMNDDLNTADAITAIFDLVKLANTSVNENSSKTFVQSILSMLNELTAV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L I    E   +  +  IE+L++ R    K K F+ AD IR++L   G  ++D
Sbjct: 405 LNI-ANNEKAEEQDTSKIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKD 456


>gi|291546868|emb|CBL19976.1| cysteinyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 469

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 191/489 (39%), Positives = 264/489 (53%), Gaps = 61/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ++   ++MYVCGPTVY+  HIGNARPMI+FD + R + Y   E 
Sbjct: 1   MKIFNTLTRRKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S         I+++  ++  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGVSA------EEISTRYIKECKKDMADMNVKPATTAPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ +I  G+AY  A+  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIQGMIDMIQTLIDKGYAYPAADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLKVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPSWPSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           IFPHHENEIAQS CC  +I   A  W+HNGFLN++ RKMSKS GNF T+ ++       G
Sbjct: 233 IFPHHENEIAQSECCNGKI--FARYWMHNGFLNIDNRKMSKSLGNFRTVRQI-------G 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP 349
             +   V+R  ML  HYR P++F          +++R+ EA   LS       ++ I + 
Sbjct: 284 EQYDLQVLRFFMLNAHYRSPLNFSADLMEAAKNSLERILEAAGKLSDRKDNGAAENITEE 343

Query: 350 AVL-------------SALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
            +              +A+ +D NT  A+ A+ +L + +  N D          L     
Sbjct: 344 ELALLKEAEGFVAKFEAAMDDDFNTADALAAIFELVKFANTNVDENSSREFAGGLYEELF 403

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + +LG+++ K  E L+K     IE L+QER    K K F  AD IR +L  KG IL+D
Sbjct: 404 KLSDVLGLKIEKKEEILDKE----IEDLIQERQAARKAKDFQRADEIRDELLKKGIILKD 459

Query: 445 YKNPDNGQR 453
            +     QR
Sbjct: 460 TREGVKWQR 468


>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 467

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 178/492 (36%), Positives = 270/492 (54%), Gaps = 66/492 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+   FQ I+   ++MYVCGPTVY++ HIGNARP +VFD++ R L Y   + 
Sbjct: 3   IQLYNTLTRQKETFQPIEEGKVKMYVCGPTVYNYIHIGNARPAVVFDMVRRYLEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII+ A +      +++ +  +  +    +  DT  L        PR
Sbjct: 62  -VTYVSNFTDVDDKIIKAANE------LDEDVMTVAERYIAAYYNDTEALGVRKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I  +I  G+AYE++ ++ F T     YG  S++ +D+ + G R+  +  
Sbjct: 115 VTESMDDIITFITRLIDKGYAYESSGDVYFRTRKFDTYGQLSQQSLDDLQAGARIQVEEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  W SPWG GRPGWHIECSAM   +LG   DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKTAKEGEIAWSSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  ++ AN WIHNG++N++  KMSKS  NFI +++++       R +  
Sbjct: 235 HENEIAQSEALNE-QRMANYWIHNGYINIDNEKMSKSLNNFILVHDII-------RQFDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------------SKWPQT 340
            V+R  ++  HYR PI+F+ ++L  A+  L                         KW   
Sbjct: 287 DVVRFFIVNAHYRSPINFSDEQLETAKTSLERIQTTYENLTYRLGESADLGGGQDKWFAL 346

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARES----TKNHD-------LLPIFNASA 389
              +G      ++++ +D N+ +A+  +  L R++    T+ H         L  F+  A
Sbjct: 347 IRKEG---ERFIASMDDDFNSANAVAVMFDLVRQANIYLTEKHTSKEVLEAFLKQFDDMA 403

Query: 390 HILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +LGI V +  E L+++    +E+L++ER+   K + F+ AD IR  L+ +G ILED   
Sbjct: 404 FVLGIAVKRQAELLDED----VEQLIEERIQARKDRDFARADEIRDSLKDQGIILED--T 457

Query: 448 PDNGQRMTRWKQ 459
           P      TRWK+
Sbjct: 458 PQG----TRWKR 465


>gi|330972601|gb|EGH72667.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 460

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 180/478 (37%), Positives = 262/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H G  R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHPGYGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIEAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE    +  D+             A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR ++ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDRITAMGVLLED------GKGGTTWR 457


>gi|303256926|ref|ZP_07342940.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860417|gb|EFL83494.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 464

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 190/460 (41%), Positives = 263/460 (57%), Gaps = 29/460 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R +  F++I P  + MYVCG TVYD  HIG+ R  I FDV  R L+    + 
Sbjct: 3   LKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TD+DDKII+RA  E   +P     S +    T++  +D   L CL P+ +PR
Sbjct: 62  -VKFVRNVTDVDDKIIKRA-AERKILP-----SELAETYTKRMQEDLGELGCLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IP+M+ LI+ +   G+AY+  N ++ F       YG+ S +K+DE + G RV  + 
Sbjct: 115 ATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSGKKVDELQPGERVRVEE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWKR+ P EP W+S WG+GRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 175 AKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDLMFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-ETKKFGGRSW 302
           HHENEIAQS  A+  +K  N W+H+G L + G KMSKS GNF TI + L ET    G   
Sbjct: 235 HHENEIAQSEAANG-KKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGDKN 293

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEA-EILLSKWPQTSTSKGIIDP---------AVL 352
               +R  +L +HYR PIDF+   + +A + L+  +     +    +P            
Sbjct: 294 GNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADDNPLDWNEKYAAQFK 353

Query: 353 SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI------EVCKEHLNKN 404
            A+ +D NT  A+  L +LA+E   TK+ +L         +LGI         K  ++  
Sbjct: 354 EAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLAPEAFVKGAVDSV 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              A+E L+ ER      K ++ AD IRK+L  K  +LED
Sbjct: 414 DEAAVEALIAERKAAKAAKNWARADEIRKELLEKNIVLED 453


>gi|221141034|ref|ZP_03565527.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|302750421|gb|ADL64598.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 466

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|89893193|ref|YP_516680.1| hypothetical protein DSY0447 [Desulfitobacterium hafniense Y51]
 gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997351|sp|Q250Q6|SYC_DESHY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781676|sp|B8G1U2|SYC_DESHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 477

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 181/483 (37%), Positives = 258/483 (53%), Gaps = 61/483 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT+  +  EF+  +   + MY CGPTVY++ H+GN R ++VFD++ R L   Y   
Sbjct: 3   LRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYL--LYKGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII+R  QE    P+  A   I      ++ KD   L  +  +  P+
Sbjct: 61  DVTFVQNFTDIDDKIIKRG-QEEGRDPLELAQDYIG-----EYFKDAAALNLMPASIHPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HIP+MI +I+ +   G AY  + ++ F    +P YG  S R +++ + G RV     
Sbjct: 115 ATDHIPEMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG  FDIHGGG DL+FPH
Sbjct: 175 KQNPMDFALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      E  A  W+HN FL +  +KMSKS GNF T+ E+LE        +P 
Sbjct: 235 HENEIAQAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILE-------HFPG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIR  +L THYR P+DF  + L  A+  L +     TS  + D A+             
Sbjct: 288 EVIRFYLLGTHYRSPLDFDDENLQMAQKGLER---LQTSIRLADEALGRQGQNSADAASG 344

Query: 352 --------------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--------- 388
                           A+ +D N+  A  +L +L +    +    P  +           
Sbjct: 345 QKLRAAAEEARREFAEAMDDDFNSALAYASLFELGKAINAHVQAYPYSSEGLLKARATLW 404

Query: 389 --AHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             A +LG ++ K     E  N+ +   +E L++ R I  K K +  +D IR +L+  G +
Sbjct: 405 ELADVLGFDLAKPANQAEAGNQKLDQVMELLLEVRAIARKKKDWEMSDLIRDRLKDLGIV 464

Query: 442 LED 444
           LED
Sbjct: 465 LED 467


>gi|329313250|gb|AEB87663.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 466

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 479

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 188/481 (39%), Positives = 262/481 (54%), Gaps = 59/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL  K  EFQ +   N+++YVCG TVYD  HIG+AR   VFDV+ R L   +   
Sbjct: 2   LKVFNTLSNKKEEFQPLQKDNVKIYVCGVTVYDLCHIGHARSSGVFDVIRRYL--MFKGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII+R+ ++        A + I   +      D   L  L P H P+
Sbjct: 60  NVTFVKNFTDIDDKIIKRSNEKQMDWR-ELAANFIAEHDA-----DMDSLNILRPDHTPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I QMI + + +I  G AYE+N +I +       YG  S RK+++   G R+     
Sbjct: 114 ATDYIKQMIQMCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSVK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S P EP WESPWG+GRPGWHIECS MS   LG  FDIHGGG DL+FPH
Sbjct: 174 KENPYDFVLWKASKPGEPSWESPWGQGRPGWHIECSVMSEDLLGLPFDIHGGGKDLVFPH 233

Query: 245 HENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HENEIAQS   C     K    WIHNGF+N+   KMSKS GNF TI ++L       + +
Sbjct: 234 HENEIAQSEAACGCMFSK---YWIHNGFVNVNQEKMSKSLGNFFTIRDVL-------KEF 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIID------- 348
            A ++R  ++ THYR  +DF+   L EAE        +L +  + +  K  +D       
Sbjct: 284 DAEIVRYFLMTTHYRSALDFSQDHLLEAEKSLNRIYTMLDEISRFNAGKKGVDITKEAEK 343

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLP--------IFNAS 388
                     +A+ +D NT  A+ A+ ++ RE+ +      N    P        +F   
Sbjct: 344 MKETFMDKFQTAMDDDFNTPEALAAMFEVIRETNRLLGSKPNKISFPALQEAVQDVFKVI 403

Query: 389 AHILGI--EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILE 443
             +LGI     ++    N+SI+ E+L   +Q+R    K K F  AD IR++L+ +G  L 
Sbjct: 404 LDVLGIVKYTPEKWFRINLSISEEELRQKIQDRADAKKDKNFELADSIRQELKQQGIELL 463

Query: 444 D 444
           D
Sbjct: 464 D 464


>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 461

 Score =  320 bits (819), Expect = 4e-85,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +P 
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIARNHAYVADNGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE         T  + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDMTAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 478

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 194/482 (40%), Positives = 262/482 (54%), Gaps = 59/482 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+ERK   F+ + P  + MYVCGPTVYD  HIG+AR +IVFDV+ + L     E 
Sbjct: 3   LRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA Q      +      +  +  ++F +D   L     T +P+
Sbjct: 62  -VTYVRNFTDVDDKIINRAVQ------LGIESHEVAERYIKEFYEDMDALNIKRATIEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I LI+ ++    AY  + +I +      +YG  S RK+++ + G RV     
Sbjct: 115 ATEHIDKIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK   P EP WESPWGRGRPGWHIECSAMSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KNNPFDFALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  A   EK  A  W+HNGF+N+   KMSKS GNF+ I ++L       +S+ 
Sbjct: 235 HENEIAQSEGA--FEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDIL-------KSYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID------ 348
              +RL +L  HYR PIDFT + + E+E  L K              T K  I+      
Sbjct: 286 PDSVRLFLLSNHYRSPIDFTDKAMEESEAALDKIYSAIQRVEEIADITGKDFINYPEGYW 345

Query: 349 PAVLSALYNDLNTVSAIQAL-------HKLARESTKNHDLLPIFNA-------SAHILGI 394
                ++ +D NT   I  L       ++L  E++ + ++  I N+          ++GI
Sbjct: 346 EKFCESMDDDFNTAKGIGYLFDSVRHINRLLDENSNSDEIKTIINSIYADIRKMGDVIGI 405

Query: 395 --EVCKEHLNKNISIAIE----------KLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
             E  + + NK  +  IE           LV++R    K K +  AD IR +L     I+
Sbjct: 406 LSEPAEIYFNKKKTKFIETKDVDPSLIDALVKQRFEARKAKDWKKADRIRDKLSGIDVII 465

Query: 443 ED 444
           ED
Sbjct: 466 ED 467


>gi|21282214|ref|NP_645302.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485394|ref|YP_042615.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297208757|ref|ZP_06925185.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912847|ref|ZP_07130289.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|24418688|sp|Q8NXY7|SYC_STAAW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56749395|sp|Q6GBV8|SYC_STAAS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21203650|dbj|BAB94350.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243837|emb|CAG42262.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296886702|gb|EFH25607.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300885951|gb|EFK81154.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 466

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDRGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|314932753|ref|ZP_07840122.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654434|gb|EFS18187.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
          Length = 466

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 262/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ ++                  + E E + +   + S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYIDQI 345

Query: 348 DPAVL---SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
           +  +    + + +D NT +A+ A + LA+ + K            H    ++   + +LG
Sbjct: 346 ETILRQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLHRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  E+ N+ +   IEKL++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLKGENENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILED 456


>gi|225017556|ref|ZP_03706748.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
           DSM 5476]
 gi|224949706|gb|EEG30915.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
           DSM 5476]
          Length = 464

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 182/472 (38%), Positives = 264/472 (55%), Gaps = 50/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF+ I P+ + MY CGPTVY++ HIGNARP+IVFD L R    + G K
Sbjct: 1   MKVYNTLTRQKEEFKTIHPNEVDMYACGPTVYNYIHIGNARPIIVFDCL-RSYFEFRGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII++A +E          S I+ K  +++ KD   L     T  P+
Sbjct: 60  -VKFVQNFTDVDDKIIKKANEEGVEA------SEISEKYIKEYEKDAKGLNVRPATIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I ++Q+++ +G+AYE+  ++ F T+    YG  S   +++ + G RV     
Sbjct: 113 VTQSMDMIIDIVQHLVDNGYAYESQGDVYFRTTKFKEYGKLSHMPLEDLEAGNRVEVSDI 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP W+SPWG+GRPGWHIECSAM+++YLGK  D+H GG DLIFPH
Sbjct: 173 KEDPMDFAVWKAAKPGEPAWDSPWGKGRPGWHIECSAMATNYLGKTIDLHCGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN W+HNG++N++ RKMSKS GNF T+ E+ E  KFG      
Sbjct: 233 HENEIAQSECATGA-VFANYWMHNGYINVDNRKMSKSLGNFFTVREVAE--KFGYEP--- 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------TSTSKGII 347
             IR  ML  HYR PI++ V+ + + +  L +                    T   K  I
Sbjct: 287 --IRYMMLQAHYRSPINYNVEVIEQCKASLERMYNFKKNIAFALSKAEDGEFTDKQKEAI 344

Query: 348 ---DPAVLSALYNDLNTVSAIQALHKLARE----------STKNHDLLP--IFNASAHIL 392
                  + A+ +D NT  AI A+ +L R+           +K H  L   IF+    +L
Sbjct: 345 LARKQQFIDAMEDDFNTADAISAVFELIRDINPLISGETLGSKQHIALAKEIFDELIGVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G+        + I   +  LV++R    K K F  AD +R ++   G+ +E+
Sbjct: 405 GL--LYNDKEEEIPAEVTALVEQRAAARKEKNFKLADELRDRIGELGYAIEE 454


>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 475

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 190/478 (39%), Positives = 259/478 (54%), Gaps = 58/478 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR     +C 
Sbjct: 6   IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLR-----ECG 60

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P
Sbjct: 61  YPLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDANALGVLRPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT +IPQMI +I+ +I +  AY  AN ++ +       YG  S + +D+ + G RV   
Sbjct: 115 KATENIPQMIAMIETLIQNSKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS + LG  FDIHGGG DL F
Sbjct: 175 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCAD---------------RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           PHHENEIAQS  A                 I      W+HNGF+ ++G KMSKS GNF T
Sbjct: 235 PHHENEIAQSVGASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 294

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKG 345
           I E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +T   
Sbjct: 295 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 347

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG- 393
             D +           +A+ +D  TV A+  L +LA E  K +D  L     A   I+G 
Sbjct: 348 AFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 407

Query: 394 -----IEVCKEH-LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                IE  +   ++  +S   I+ L+  R      K +  +D IR  L     ILED
Sbjct: 408 LQRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWVESDRIRDLLNEHKIILED 465


>gi|253732537|ref|ZP_04866702.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253729466|gb|EES98195.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|329731981|gb|EGG68337.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 466

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+ ++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKELVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|109894959|sp|Q3SHN1|SYC_THIDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
           ATCC 25259]
          Length = 454

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 187/475 (39%), Positives = 264/475 (55%), Gaps = 41/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I N+L R   EF  + P  +RMYVCG TVYD  H+G+AR  +VFD++ R LR      
Sbjct: 2   LHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRA--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA  E+   P     + +T +   +  +D   L  L P H+PR
Sbjct: 60  AVEYVRNITDIDDKIIKRA-HENKETP-----AALTERFIAEMHEDERALGVLPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ QM+ LI  ++  G AY A N ++ +     P YG  S + +DE + G RV    
Sbjct: 114 ATAYVAQMLALIAQLVDRGLAYAAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVDP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP WESPWG+GRPGWHIECSAMS+  LG+ FDIHGGG DL FP
Sbjct: 174 NKRDPMDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+L+        + 
Sbjct: 234 HHENEIAQSEGAHGC-TFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVLQ-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTSKGIID---PAVL---SA 354
           A ++R  +L  HYR P++++   L +A   L++     + + + G +D   PA      A
Sbjct: 286 AEIVRFFILRAHYRSPLNYSDAHLDDARGALTRLYTALKGAPAAGPVDWDAPAAARFRGA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGI--EVCKEHLNKNISIA--- 408
           + +D NT  AI  L +LA E+ + +            ++G+      + L    S A   
Sbjct: 346 MDDDFNTPEAIAVLFELAAEANRGDTGAAQTLRNLGAVIGLLQRDASDFLQAGTSEAGLD 405

Query: 409 ---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              IE  +  R    K + F+ +D IR +L + G +LED      G   T W+++
Sbjct: 406 ASEIEARIAARQAARKARDFAESDRIRDELAAAGIVLED------GPGGTTWRRQ 454


>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 493

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 188/488 (38%), Positives = 263/488 (53%), Gaps = 72/488 (14%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   E  V+YVR
Sbjct: 1   MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYE--VSYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RA++        D IS+ + +  ++F +D  +L CL P+ QPR ++HIP
Sbjct: 59  NFTDVDDKIIARAKELE-----EDPISL-SRRFCEEFNRDMEQLQCLDPSVQPRVSDHIP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           Q+I LI+ I+ +G+AY+ + +I F     P YG  S RK+++ + G RV     KK+PAD
Sbjct: 113 QIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPAD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIA 232

Query: 251 QSCCADRIEKTANI--WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           QSC A     ++NI  WIHNGF+ ++  KMSKS GNF TI ++++        +    +R
Sbjct: 233 QSCAAC---DSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL-------YHPLALR 282

Query: 309 LAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQT-------------- 340
           L ++ THYR PI+++               Q L + E  L +   T              
Sbjct: 283 LFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSI 342

Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                    S S  ++ P  L+A+   L T++ +    K  +++ +   L  +      +
Sbjct: 343 NTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALETTIRDV 402

Query: 392 LGI------------EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLE 436
           L I            E  KE   K   +  E +   VQER    K K++  +D IRK L 
Sbjct: 403 LTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLA 462

Query: 437 SKGFILED 444
             G  L D
Sbjct: 463 KVGIALMD 470


>gi|320325346|gb|EFW81413.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320327670|gb|EFW83678.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330882429|gb|EGH16578.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 460

 Score =  319 bits (818), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 180/478 (37%), Positives = 258/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +R+YVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRIYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE         T    L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED      G+  T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLED------GKGGTTWR 457


>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|187629826|sp|A5UFP3|SYC_HAEIG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 459

 Score =  319 bits (818), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 266/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV+           
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGADQSAVVFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +  AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEVLIKQRNEARAAKDWPVADAARNELTAMGIVLED------GPNGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|153855861|ref|ZP_01996836.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
 gi|149751829|gb|EDM61760.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
          Length = 468

 Score =  319 bits (818), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 187/478 (39%), Positives = 259/478 (54%), Gaps = 58/478 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ +K  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTMTKKKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  +         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGVTA------DEISKRYIAECKKDMDGMNIKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +IQ +I  G AYE N  + + T    +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVDMIQTLIDKGFAYEKNGTVYYSTRKFKDYGKLSHKNLDDLRSGERSLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFRTVREISE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIID--- 348
           +   V+R  ML  HYR P++F+          ++R+  A   L    + + ++ I D   
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERIVNAADNLKFLMENAKAEAITDAEA 344

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNAS 388
                          A+ +D NT  A+ A+  L +        ES+K +   L  +    
Sbjct: 345 ENFAKTEEFVAGFEKAMDDDFNTADAVAAIFDLVKYINTTTDAESSKEYLQKLFDLLVKL 404

Query: 389 AHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LG+ V K  E L+++    IEKL++ER    K K F+ AD IR +L  KG IL+D
Sbjct: 405 TGVLGLIVDKKEEILDED----IEKLIEERQAARKAKDFARADAIRDELLEKGIILKD 458


>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123084029|sp|Q1QVV6|SYC_CHRSD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 461

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 181/469 (38%), Positives = 259/469 (55%), Gaps = 43/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   F  +D   +RMYVCG TVYD+ HIG+AR M+ FD++ R LR+   E 
Sbjct: 1   MQIYNTLTRRKETFTPLDAGRVRMYVCGITVYDYCHIGHARVMVAFDMITRYLRWRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI++RA +       ++ I+ +T +      +D  RL  L P  +PR
Sbjct: 60  -VDYVRNITDIDDKILKRAEEN------DEPIAALTERMIAAMHEDEGRLGVLRPDREPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  ++ ++Q +I  G+AY  AN ++ +       YG  S R +D+ + G+RV  + 
Sbjct: 113 ATAHVDDIVAMVQRLIDKGYAYPAANGDVYYRVRRFEGYGKLSNRDLDDMRAGSRVEVET 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P E  W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 173 AKEDPLDFVLWKAAKPGEASWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+H G + ++  KMSKS GNF TI E+LE          
Sbjct: 233 HHENEIAQSEAATG-RPYVNTWMHAGAVRVDQEKMSKSLGNFFTIREVLEAH-------- 283

Query: 304 AP-VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVLSA 354
           AP V+R  +L +HYR PI++    L++A   L ++        P             ++A
Sbjct: 284 APEVVRYLLLASHYRSPINYAPDALSDARRSLERFYNALQGVAPVAGEVAAGYRERFIAA 343

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGI-----EVCKEHL 401
           + +D NT  A+  L  LARE  +     P               +LG+     E   +  
Sbjct: 344 MDDDFNTAEALAVLFDLARELNRAKQEAPAHAPALAHELKELGGVLGLFGQDPEGFLQAG 403

Query: 402 NKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              + ++   IE  ++ R    K K F++AD IR +L + G +L+D ++
Sbjct: 404 AGRLPMSEEDIEARIEARAQAKKAKDFATADGIRDELAALGIVLKDGRD 452


>gi|297590580|ref|ZP_06949219.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297576879|gb|EFH95594.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312439051|gb|ADQ78122.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193893|gb|EFU24287.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 466

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 177/471 (37%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + ++P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQTVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|51595384|ref|YP_069575.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186894407|ref|YP_001871519.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|61216168|sp|Q66DK9|SYC_YERPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558803|sp|B2K7N2|SYC_YERPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51588666|emb|CAH20275.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186697433|gb|ACC88062.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 461

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    KN D+      +      A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNDLGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|229558805|sp|B1JHJ1|SYC_YERPY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 461

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 264/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGI-IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            + + G+  +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGVEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    KN D+      +      A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKDWALADAARDQLNDLGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|304381872|ref|ZP_07364519.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|304339658|gb|EFM05605.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
          Length = 466

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 177/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +D++ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDIVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|307822084|ref|ZP_07652316.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736650|gb|EFO07495.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 492

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 191/482 (39%), Positives = 271/482 (56%), Gaps = 47/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   FQ      + MYVCG TVYD+ HIG+AR M+VFD + R  R+   E 
Sbjct: 32  LKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHQGYE- 90

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA      I   +    +T +      +D   LA L P  +PR
Sbjct: 91  -LTYVRNITDIDDKIIQRA------IENGEDYGKLTERFIDAMHEDERALAVLPPDLEPR 143

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  +I +I+ ++    AY  +N ++ +  +   +YG  S + +D+ + G RV    
Sbjct: 144 ATQSIADIISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSGKNLDDLQAGERVDVDL 203

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG+DL FP
Sbjct: 204 AKRNPMDFVLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFP 263

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   EK  N+W+HNGF+ ++  KMSKS GNF T+ E+L   K       
Sbjct: 264 HHENEIAQSEGATG-EKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVLNQYK------- 315

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLS----A 354
             +IR  +L +HYR P++++ ++L +A+  L++         +T++  I+ A  +    A
Sbjct: 316 PEIIRFFILSSHYRSPLNYSDEQLNDAKAALTRLYTALRGVETTAEAAIEEAYKTRFEQA 375

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI--EVCKEHLNKN 404
           + +D NT  A+  L  LAR+  K  +        L       + +LGI  +     L  +
Sbjct: 376 MDDDFNTPVALAVLFDLARDLNKAKELDQQKACALAATLKYLSGLLGILQDDPDAFLKGS 435

Query: 405 ISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              A      +E+ +Q RL   K K ++ AD IR  L+ +G ILED  +PD     T W+
Sbjct: 436 GDAAVLGEETVEQQIQARLDAKKAKDWALADKIRNDLKEQGVILED--SPDG---TTSWR 490

Query: 459 QK 460
           ++
Sbjct: 491 RE 492


>gi|257470811|ref|ZP_05634901.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317065015|ref|ZP_07929500.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690691|gb|EFS27526.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 473

 Score =  319 bits (817), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 192/483 (39%), Positives = 272/483 (56%), Gaps = 57/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL  K+ EF+ +    + MYVCGPTVY++ HIGNARP I FD + R   Y  G K
Sbjct: 2   IKIYNTLSGKVDEFKPVREGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQP 123
            V YV+N TD+DDK+I RA +E  S+        I  K  + + +DT+++    A   +P
Sbjct: 61  -VKYVQNFTDVDDKMIRRANEEGVSLKD------IAEKYIKAYFEDTSKVNLKEAGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT HI  MI +IQN+I  G+AYEA  ++ F+     + YG+ S++ +D+ K G R+   
Sbjct: 114 KATEHIGDMIEIIQNLIEKGYAYEAEGDVYFNVEKYKDGYGALSKQNVDDLKSGARIEVA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK +   EP WESPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 174 DIKKSPVDFALWKAAKEGEPSWESPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+   E  A  W+HNG++N+ G KMSKS G F+ + ++L+  +F GR  
Sbjct: 234 PHHENEIAQSKCSCGGE-FARYWMHNGYININGEKMSKS-GTFMLLRQVLD--QFEGR-- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPAVL 352
              VIRL +L  HYR+P+DF+   L +A+  L +               T +   D A L
Sbjct: 288 ---VIRLFILGAHYRKPMDFSNYELNQAKSSLERIENALLRAKDALAADTKEDGADCAEL 344

Query: 353 ------------SALYNDLNTVSAIQALHKLARESTK--NHDLLP-------------IF 385
                       +A+ +D NT   + A+ +L +E  K    D L              + 
Sbjct: 345 AEVLKSSSEKFVTAMDDDFNTAQGLGAIFELIKELNKALEEDKLSAKGKETVKETVDYVV 404

Query: 386 NASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N    +LG+ +  ++   N+ S  +E +++ R      K ++ +D IR +L   G  ++D
Sbjct: 405 NIMQEVLGVILKLDNEVGNLTSELVEFILELRREARADKNWAMSDKIRDRLAEIGIKIKD 464

Query: 445 YKN 447
            K+
Sbjct: 465 GKD 467


>gi|152989578|ref|YP_001348862.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|187629850|sp|A6V727|SYC_PSEA7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150964736|gb|ABR86761.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 460

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 262/483 (54%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGRFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------VLS 353
             V+R  ++ +HYR PI+++ + L EA+  L ++   +  KG+ + A            +
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRF--YNALKGLPEAAPAEAAEHVERFAA 343

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNASAHILGIE 395
           A+ +D NT  A   L +LARE  +  D                  LL +         ++
Sbjct: 344 AMDDDFNTAGACSVLFELAREVNRLRDSDLPAAAALAARLKQLAGLLGVLQLEPEAF-LQ 402

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              E   K  +  +E L+Q RL     K ++ +D IR QL + G +LED      G+  T
Sbjct: 403 AGAE--GKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLED------GKGGT 454

Query: 456 RWK 458
            W+
Sbjct: 455 TWR 457


>gi|314937165|ref|ZP_07844512.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655784|gb|EFS19529.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 466

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 260/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEAFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--KGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++ + S+P       I  +  + F +D   L     T  PR
Sbjct: 60  TVDYVSNFTDVDDKLINRSKELNESVPE------IADRYIKAFYEDVGALNVKRATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKQLVDDGYAYESNGDVYFRTRQFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G+GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGIID-- 348
            V+R  M+  HYR PI++ V+ +  A+  L +   +               T    ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNVELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQI 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLAR----ESTKNHDLL----PIFNASAHILG 393
                   AV+   +N  N V+A   L KLA     E+T +  ++     ++   + +LG
Sbjct: 346 NDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTKVIQRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDTLKEQNIILED 456


>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 469

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 190/481 (39%), Positives = 272/481 (56%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 12  LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYD- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 71  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVVEMYKDFDALNILRPDFEPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I ++Q +I  GHAY A+N +++FD  S  +YG  SR+ +++ + G R+    
Sbjct: 124 ATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINE 183

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 184 IKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFP 243

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 244 HHENEIAQSCCA-HGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYD 295

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTS------KGIIDPAVLS 353
           A  +R  +L  HYR  ++++ + L  A    E L +    T  S      +  +D A   
Sbjct: 296 AESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVD-AFRE 354

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT +A+  L ++ARE          K + L       A ILG+      +  + 
Sbjct: 355 AMDDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQA 414

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +++    IE L+++R      K +++AD  R  L   G ILED      G   T W++
Sbjct: 415 GSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEMGIILED------GPNGTTWRK 468

Query: 460 K 460
           +
Sbjct: 469 Q 469


>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
 gi|188022312|gb|EDU60352.1| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
          Length = 494

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 266/483 (55%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 34  LQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD- 92

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA +       N+ +  +T++   +  KD   L  L P  +PR
Sbjct: 93  -LNYVRNVTDIDDKIIKRAAEN------NETVDSLTTRMLAEMHKDFDALNILRPDSEPR 145

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +   +I  GHAY A+N +++F+  +  NYG  SR+ +++ + G RV    
Sbjct: 146 ATQHIDEIIEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEVAD 205

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 206 SKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLMFP 265

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 266 HHENEIAQSSCA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLEY-------YD 317

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
              +R  +L  HYR  +++T + L +A   L + +     +   + PA           A
Sbjct: 318 PETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSVAPAGGEIFKKRFEDA 377

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI--EVCKEHLNKN 404
           + +D NT  A   L  +ARE  +         ++L       A +LG+  +  +  L  N
Sbjct: 378 MNDDFNTPEAYSVLFDMAREINRLKSENKVAANELASELRKLAGVLGLLEQDPEAFLQGN 437

Query: 405 IS-------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                      IE L+++R    K K+++ AD  R +L + G +LED      G + T W
Sbjct: 438 AQGEGDEEVAKIEALIKQRNNARKNKEWALADAARDELTAMGIVLED------GAQGTTW 491

Query: 458 KQK 460
           ++K
Sbjct: 492 RRK 494


>gi|15926207|ref|NP_373740.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148266989|ref|YP_001245932.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393036|ref|YP_001315711.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156978858|ref|YP_001441117.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315639|ref|ZP_04838852.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255005323|ref|ZP_05143924.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|269202152|ref|YP_003281421.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|295406906|ref|ZP_06816709.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275775|ref|ZP_06858282.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246270|ref|ZP_06930119.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|21264022|sp|Q99W73|SYC_STAAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56749452|sp|Q932G0|SYC_STAAM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171769940|sp|A7WYU7|SYC_STAA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082076|sp|A6TZ06|SYC_STAA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082077|sp|A5IQ83|SYC_STAA9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13700420|dbj|BAB41718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|46395518|dbj|BAB56692.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740058|gb|ABQ48356.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945488|gb|ABR51424.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156720993|dbj|BAF77410.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|262074442|gb|ACY10415.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|285816229|gb|ADC36716.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968137|gb|EFG44163.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176868|gb|EFH36126.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829025|emb|CBX33867.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128822|gb|EFT84821.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727911|gb|EGG64360.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 466

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|329767862|ref|ZP_08259376.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328838650|gb|EGF88249.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 465

 Score =  319 bits (817), Expect = 7e-85,   Method: Compositional matrix adjust.
 Identities = 183/487 (37%), Positives = 270/487 (55%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E  S       S +T K    F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEEGIST------SELTDKYINAFFKDYDALGCKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I  ++  G AYEA+ ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIIKFIAKLVEEGFAYEADGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W+SP+G GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGETIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     +N W+HN F+N++  KMSKS GNF  + +++            
Sbjct: 234 HENEIAQSECHNHA-SFSNYWMHNAFINIDNVKMSKSLGNFRLVKDII-------AEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLSA 354
            V+RL ML  HYR PI++T++ +  A+    K   +            ++  +D  V++ 
Sbjct: 286 MVLRLFMLTVHYRTPINYTLENIELAKTNFEKIKTSYQNLQFRLNNEMTEEKLDTEVVTL 345

Query: 355 -----------LYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHIL 392
                      + +D NT +A+ + +++ R       + T N + L + NA+    + IL
Sbjct: 346 VTEELDKFEEYMQDDFNTANALSSWYEIVRISNSYTAKETVNKETLELINAAFETYSSIL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI V ++  N   S  IE L+ ER    K + F+ AD IR  L+ +G ILED K      
Sbjct: 406 GINVKED--NTLDSEHIESLIAEREAARKNRDFALADKIRDDLKEQGIILEDTK------ 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKK 464


>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|229558717|sp|B3E1P0|SYC_GEOLS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 487

 Score =  318 bits (816), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 202/508 (39%), Positives = 264/508 (51%), Gaps = 75/508 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +   F       + MYVCG TVYDF HIG+AR  IVFD++YR LR+   + 
Sbjct: 3   LRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+RN TDIDDKII RA QE            I  +    F +D  RL  L PT +P+
Sbjct: 62  -VTYIRNYTDIDDKIINRANQEGTDY------RTIADRYIATFDEDMDRLGMLRPTIEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  +I +IQ +I +GHAY  + ++ F   + P Y   S R +D+   G RV     
Sbjct: 115 ATDHIEDIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK S P EP WESPWG+GRPGWHIECSAMS  +LG  FDIHGGG DL+FPH
Sbjct: 175 KRNPMDFALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +     W+HNGF+N+   KMSKS GNF TI E+LE        +  
Sbjct: 235 HENEIAQSEGANGCQ-FVKYWLHNGFVNINSEKMSKSLGNFFTIREVLEL-------FDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------WPQTSTS- 343
             +R  +L  HYR P+D++ Q L EA+  LS+                     P ++   
Sbjct: 287 ETLRFFILQAHYRSPLDYSDQNLREAQAGLSRIYEALAALDQALEKPATAIHLPASAAEF 346

Query: 344 ----KGIIDPAVLSALYNDLNTVSA-------IQALHKLARE-----STKNHDLLPIFNA 387
                G++ P    A+ +D NT  A       I+ L++L  E     S    DL  +  A
Sbjct: 347 AEKVAGLL-PRFREAMDDDFNTAQALGTLFDSIRTLNRLLAEGGGSSSASRADLEQLRAA 405

Query: 388 SAHI---LGIEVCK---------EHLNKNISIA---IEKLVQERLILLKMKKFSSADYIR 432
              I   LG+   K             +++ I+   IE L+ ER    K K F  +D IR
Sbjct: 406 VTEIGAVLGLFRIKPSDWLAAREAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDEIR 465

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
             L S+   L D   P      T WK K
Sbjct: 466 DYLLSRDIQLVD--TPQG----TAWKVK 487


>gi|22125011|ref|NP_668434.1| cysteinyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440695|ref|NP_992234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|21957858|gb|AAM84685.1|AE013714_1 cysteine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435553|gb|AAS61111.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 476

 Score =  318 bits (816), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 17  LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 75  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 129 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 188

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 189 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 248

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 249 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 300

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 301 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA 360

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    KN D+      +      A +LG+      L     
Sbjct: 361 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 420

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 421 AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTTWR 474

Query: 459 QK 460
           +K
Sbjct: 475 RK 476


>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|21264007|sp|Q8ZCC0|SYC_YERPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123073499|sp|Q1CKY1|SYC_YERPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123372235|sp|Q1C4U1|SYC_YERPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187470969|sp|A7FL46|SYC_YERP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187470970|sp|A4TP63|SYC_YERPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558804|sp|A9R253|SYC_YERPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 461

 Score =  318 bits (816), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    KN D+      +      A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|312961737|ref|ZP_07776235.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311283996|gb|EFQ62579.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 462

 Score =  318 bits (816), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 182/478 (38%), Positives = 262/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +A   +T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEAFDALTERMIAAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALY 356
             V+R  ++ +HYR  I+++   L +A+  L ++       P  + + G    A  + + 
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAGGEAFVARFTEVM 345

Query: 357 N-DLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGI------EVCKEHL 401
           N D  T  A   L ++ RE  +  +                A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR QL + G +LED      G+  T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARTNKDWAESDRIRDQLTAMGVVLED------GKGGTTWR 457


>gi|319941120|ref|ZP_08015456.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805477|gb|EFW02279.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 468

 Score =  318 bits (816), Expect = 8e-85,   Method: Compositional matrix adjust.
 Identities = 199/488 (40%), Positives = 270/488 (55%), Gaps = 55/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+TL R+   F++++P  +RMYVCG TVYD+ HIG+ R  + FDV+ R L    G K
Sbjct: 2   LSIYSTLTREQRPFESLEPGRVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEAS-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK----DTTRLACLAPT 120
            VT+VRNITD+DDKII RA +            + T + T +F +    D   L CLAPT
Sbjct: 61  -VTFVRNITDVDDKIIRRAAER----------GVTTDELTDEFARAMQEDMLALGCLAPT 109

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +PRAT +IPQM+ LI  +   G AY  A+ ++ +     PNYG  S + ID+ + G RV
Sbjct: 110 FEPRATQYIPQMLNLIGKLEEKGFAYHAADGDVDYAVRKFPNYGRLSGKSIDDLQSGARV 169

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E+  K +P DF+LWK + P EP W+S WG GRPGWHIECSAM+   LG+  DIHGGG D
Sbjct: 170 QEREGKHDPLDFVLWKSAKPGEPQWDSKWGCGRPGWHIECSAMAMDLLGETIDIHGGGPD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL---EGR--KMSKSNGNFITINELL-E 293
           L+FPHHENEIAQS  A    + A  W+H+G L +   +G+  KMSKS GNF TI + L E
Sbjct: 230 LVFPHHENEIAQSEAATG-HQFARTWMHSGPLRVRSADGKEEKMSKSLGNFWTIRDALKE 288

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL- 352
           T    G    A V+R  +L + YR PI F+   + EA   L +   T+      D A L 
Sbjct: 289 TNAAYGEGCGAEVLRFFLLRSQYRSPITFSSVLIEEAHKALVRL-YTALKGRAADRAALD 347

Query: 353 ----------SALYNDLNTVSAIQALHKLARESTKN------HDLLPIFNASAHILGIEV 396
                     +A+ +D NT  A+  L +LA E  +         LL +     +ILG+E 
Sbjct: 348 WNEPFAARFKAAMDDDFNTALAVSVLFELATEINRTGSPALVRQLLGL-GRILNILGMEP 406

Query: 397 CKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            K  L      +     IE L++ER +  K K F+ AD IRK L ++G  L+D      G
Sbjct: 407 EK-FLQGGAEASDDASRIEGLIEERALAKKAKNFARADEIRKSLLAEGIELQD------G 459

Query: 452 QRMTRWKQ 459
              T W++
Sbjct: 460 AAGTTWRR 467


>gi|213968819|ref|ZP_03396960.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|213926422|gb|EEB59976.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 466

 Score =  318 bits (816), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 177/467 (37%), Positives = 256/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 8   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 67  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 120 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 179

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 180 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF T+ ++LE        + 
Sbjct: 240 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLE-------KYH 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          +PA          +A+
Sbjct: 292 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFTTAM 351

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE    +  D+             A +LG+      +  +   
Sbjct: 352 NDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 411

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K 
Sbjct: 412 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 458


>gi|304319902|ref|YP_003853545.1| cysteinyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298805|gb|ADM08404.1| cysteinyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 457

 Score =  318 bits (816), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 183/476 (38%), Positives = 253/476 (53%), Gaps = 39/476 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +  Y+T    +  F   DP  I +Y CGPTVY   HIGNAR  +  D++ RLL+  YG 
Sbjct: 2   SLSFYDTFRGHVEPFTPADPERITVYCCGPTVYAPPHIGNARAALTADLVVRLLKDRYGA 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V + RN TDIDDKII  A+ E   +PI+    ++T++ T  +++    L CL P   P
Sbjct: 62  EKVIFARNFTDIDDKIIAAAKDE--GVPID----VVTARATAAYLEGLDGLFCLRPDVAP 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI  M  LI +++  GHAY A   I+FDT S P YG  SR   +    G RV    
Sbjct: 116 RATAHIDSMQALIGSLLERGHAYGAEGHILFDTQSFPAYGQLSRLDREAILAGARVEIAP 175

Query: 184 HKKNPADFILWKRSTPMEPGWESP--W---GRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +K++ ADF+LWK S    PGW  P  W   G GRPGWHIECSAM +  LG   DIH GG 
Sbjct: 176 YKRDAADFVLWKPSPAEVPGWPVPASWPIDGEGRPGWHIECSAMIASVLGPSIDIHLGGQ 235

Query: 239 DLIFPHHENEIAQSCCADRIEKT--ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQSCC     +T  A  W+HNG L   G KMSKS GN  T  +LL    
Sbjct: 236 DLRFPHHENEIAQSCCGTDTGETPLARYWLHNGMLRFGGEKMSKSRGNIETPQDLLA--- 292

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLS 353
               +WP   IRLA++   YR+P+D++ + L  ++  L ++ +      +K  +   V++
Sbjct: 293 ----AWPGEAIRLALMSAQYRQPLDWSNELLAGSKAQLDRFYRVVPDGPAKAAMPDWVMA 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGI--EVCKEHLNKNISIA- 408
           AL +DLNT  A+  +H+L RE+    D+       A+   LG   +   E      +   
Sbjct: 349 ALEDDLNTPKALAMMHEL-REAAGRGDIEAAHGLKAAGAFLGFFRQTADEWFRGATADGP 407

Query: 409 ----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               I+  +  R      K ++ AD IR +L ++G +LED      G     W+++
Sbjct: 408 TESDIDAQIAARQAAKTAKNWAEADRIRDELGAQGIVLED------GPEGVTWRRR 457


>gi|308179697|ref|YP_003923825.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045188|gb|ADN97731.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 470

 Score =  318 bits (816), Expect = 9e-85,   Method: Compositional matrix adjust.
 Identities = 182/479 (37%), Positives = 264/479 (55%), Gaps = 59/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   LSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T 
Sbjct: 57  CGYHVDYVSNFTDVDDKLIKRAAEDHTTVPA------VADRFIKAFMEDTTAVNIEPATV 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----T 177
            PRA+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G    T
Sbjct: 111 HPRASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHT 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K++P DF LWK + P E  W+SPWG GRPGWHIECS MS+ YLG  FDIHGGG
Sbjct: 171 ADEETDRKEDPIDFALWKAAKPGEISWKSPWGAGRPGWHIECSVMSTKYLGDTFDIHGGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
            DL FPHHENEIAQS    +  KT AN W+HNGF+ +  +  KMSKS GNF+T++++++T
Sbjct: 231 QDLEFPHHENEIAQSEA--KTGKTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKT 288

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGI 346
                      V+R  M  T YR PI +T   L EA   L K              +   
Sbjct: 289 VD-------PQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNG 341

Query: 347 IDPAVL-----------SALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNA 387
            D AV            +A+ +D N  + + A+++LA+         + +   L+ +  A
Sbjct: 342 TDTAVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAQATVQKETLIALQKA 401

Query: 388 SAHILGI-EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + G+  V  E  N  ++  AI+ L+ ER    K K F+ AD IR  L+++G ILED
Sbjct: 402 LVQLTGVFGVTFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILED 460


>gi|167855009|ref|ZP_02477783.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853857|gb|EDS25097.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 459

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/480 (38%), Positives = 258/480 (53%), Gaps = 48/480 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KIYNTL+R+  EF+ I P ++ MYVCG TVYD  H G+ R  + FDV+ R LRY  Y  
Sbjct: 2   LKIYNTLKREKEEFKPIYPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + YVRNITD+DDKII+R      S+  N+    +  +   +  KD   L  L P  +P
Sbjct: 61  --LRYVRNITDVDDKIIKR------SLENNETCDQLVDRMIIEMHKDFDALNILRPDVEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT HIP++I +++ ++  GHAY A + +++F+  S   YG+ SR+ +++ + G RV  K
Sbjct: 113 RATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIK 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EP W+SPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+F
Sbjct: 173 SVKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA   +   N W+H G L +   KMSKS  NF TI ++L         +
Sbjct: 233 PHHENEIAQSCCA-HGDDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDIL-------NKY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAVLS 353
               +R   L   YR  +D++ + +  A   L +         W            A   
Sbjct: 285 DCESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNVELAENDQYVTAFKE 344

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI------EVCKE 399
           ++ +D NT  A+  L +LARE  K         + L       A +LG+         + 
Sbjct: 345 SMDDDFNTPGALAVLFELAREINKLKAENQVEANKLAARLKQLAGVLGLLEQDPETFLQG 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L+++R      K ++ AD  R +L + G +LED      G   T W++
Sbjct: 405 DANNDEVAEIEALIKQRNEARASKNWAVADEARNKLTAMGIVLED------GANGTTWRK 458


>gi|323439800|gb|EGA97517.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 466

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++   E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K FS AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKKKDFSRADEIRDMLKSQNIILED 456


>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 460

 Score =  318 bits (816), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/466 (39%), Positives = 261/466 (56%), Gaps = 40/466 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ + P  I MYVCG TVYDF H+G+AR M+ FDV+ R LR+   + 
Sbjct: 3   LQIYNTLSRQKEEFKPLQPGKIGMYVCGMTVYDFCHMGHARVMVSFDVIVRYLRHKGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII+RA +     P    +  +     + F K    L  L P  +PR
Sbjct: 62  -VNYIRNITDIDDKIIQRAAENGE--PFEQLVDRMVDAMNEDFAK----LNILTPNSEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I +++ +I  G AY A N ++ +       YG  S + ++E + G R+  + 
Sbjct: 115 ATQHIDGIIKMVETLIEKGFAYAAKNGDVYYRVRKFDGYGKLSGKILEELESGARIAVEE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 175 EKEDPLDFVLWKSAKPEEPSWDSPWGQGRPGWHIECSVMSTCCLGNNFDIHGGGPDLKFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E  AN W+H G L ++G KMSKS GNF TI ++LE        + 
Sbjct: 235 HHENEIAQSEAATG-EHYANTWMHAGALRIDGEKMSKSLGNFFTIRDILE-------KYD 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDP--AVL------ 352
           A VIR  +    YR  I+++   L +AE  L +            +ID   AV+      
Sbjct: 287 AEVIRFFLSSVQYRSAINYSEDGLKDAEAKLDRLYNAIHGCDLSAVIDEQDAVVQDTRER 346

Query: 353 --SALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILGIEVC--KEHLNK 403
             +A+ +D NT  AI  L  L      +E  + + L  +    + ILG        +L +
Sbjct: 347 FEAAMDDDFNTPKAIAVLFDLVNEINKKEGAEKNPLAALLVELSSILGCLQSDPDNYLQR 406

Query: 404 NISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +++    I+  +QER    K K F+ AD IR+ L+++G IL+D +
Sbjct: 407 GVTLDDAYIQGKIQERAQAKKDKDFALADKIREDLDAQGIILQDSR 452


>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
           furnissii NCTC 11218]
          Length = 460

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 184/481 (38%), Positives = 263/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +   S         +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENQESC------ESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L+Q +I  G AY A+N +++F+ +   +YG  S++ +D+ + G RV    
Sbjct: 114 ATAYIQEIIELVQRLIDRGFAYVADNGDVMFEVNKFDDYGKLSKQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +   +     +  PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDMTVPAAGGEEYLTRFTTA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE        + K   L  +    A ++GI         K  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTEDTDKASALGALMRELADVIGILYQDPEAFLKGD 405

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLNEMGIVLED------GPSGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 461

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY  G K
Sbjct: 2   LKIYNTLTRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYV-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESIETLTNRMIGEMHKDFAALGILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+  +I  GHAY A+N +++FD  S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATRHIDEIIELVGRLIERGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA       N W+H+G + ++  KMSKS GNF T+ ++L+        + 
Sbjct: 234 HHENEVAQSTCA-HDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  +++    L +A   L +             +      +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDVSAVAAGGEEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI--------EVCK 398
           + +D NT  A   L  +ARE         T    L       A +LGI            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDKTAADALAAKLRQLAEVLGILQQDPEQFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L++ R    + K ++ AD  R +L + G +LED      G + T W+
Sbjct: 406 AQANDDEVAEIEALIKMRNDARQAKDWAQADVARDKLNALGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|228475261|ref|ZP_04059986.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270726|gb|EEK12135.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 466

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 177/471 (37%), Positives = 260/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEAFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--KGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++ + S+P       I  +  + F +D   L     T  PR
Sbjct: 60  TVDYVSNFTDVDDKLINRSKELNESVPE------IADRYIKAFYEDVGALNVKRATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIEFIKQLVDDGYAYESNGDVYFRTRQFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G+GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGIID-- 348
            V+R  M+  HYR PI++ ++ +  A+  L +   +               T    ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQI 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLAR----ESTKNHDLL----PIFNASAHILG 393
                   AV+   +N  N V+A   L KLA     E+T +  ++     ++   + +LG
Sbjct: 346 NDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTQVIQRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDTLKEQNIILED 456


>gi|28870897|ref|NP_793516.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|301384135|ref|ZP_07232553.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302059502|ref|ZP_07251043.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302134322|ref|ZP_07260312.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|37999386|sp|Q87YQ2|SYC_PSESM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28854146|gb|AAO57211.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331018326|gb|EGH98382.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 460

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 177/467 (37%), Positives = 256/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF T+ ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFTTAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE    +  D+             A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K 
Sbjct: 406 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGKG 452


>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|187470968|sp|A1JNP9|SYC_YERE8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 461

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA +       N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRALEN------NETCEQLTTRMLVEMHKDFDALNLKRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY  AN +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE         T  + L       A++LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDITAANALAAELRKLAYVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDDDEVAKIEVLIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|269940102|emb|CBI48478.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 466

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N+   KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIGNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|61216117|sp|Q5L429|SYC_GEOKA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 466

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 187/487 (38%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   + 
Sbjct: 4   IRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDK+I+ AR+   S+P       I  +  + + +D   L C      PR
Sbjct: 63  -VTYVSNFTDVDDKLIKAARELGESVPA------IAERFIEAYFEDIQALGCKKADIHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE + G R+     
Sbjct: 116 VTENIDTIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEK 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 176 KDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R    
Sbjct: 236 HENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------REIDP 287

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSK---------- 344
            V+R  ML  HYR PI+++          ++RL  A   L    Q ST+           
Sbjct: 288 QVLRFFMLSVHYRHPINYSEELLESARRGLERLKTAYSNLQHRLQASTNLTDNDEEWVSR 347

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKN----HDLLPIFNASAHIL 392
              I  + +  + +D NT + I  L +LA+       E T +    H  L  F   A +L
Sbjct: 348 IADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSEKVIHAFLREFEQLADVL 407

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + ++ L   +   IE L+Q+R    K + F+ AD IR +L +K  ILED   P    
Sbjct: 408 GLTLKQDEL---LDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILED--TPQG-- 460

Query: 453 RMTRWKQ 459
             TRWK+
Sbjct: 461 --TRWKR 465


>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 473

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 193/473 (40%), Positives = 269/473 (56%), Gaps = 51/473 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ--GWSV 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII+RA +        ++I+ +T +  Q   +D   L CL P   PRAT
Sbjct: 64  KYVRNITDIDDKIIKRANEN------GESITQLTDRFIQAMNEDAENLGCLHPDEAPRAT 117

Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
           ++I QM  +I N++  G AY  AN ++ F       YG  S RK+++ + G   RV  + 
Sbjct: 118 DYIDQMQSMIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI ++++        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMD-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  LS++  +          T    +D  +L  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQAYGDTQVDTLDETLLER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI--EVCKE 399
             SA+ +D NT  AI  L ++ +E       +  +   I+ A+     +ILG+     +E
Sbjct: 350 FNSAMRDDFNTAEAIAVLFEVNKELNRAVKEQQAEQAAIYYATLRHLTNILGLVQHNVEE 409

Query: 400 HLNKNISI--------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            L  +I           IE L+Q+R    K K+F+ AD IR+ L  +G +LED
Sbjct: 410 FLKSDIGQEALALSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLED 462


>gi|56478148|ref|YP_159737.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|61216130|sp|Q5P1H8|SYC_AZOSE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56314191|emb|CAI08836.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 461

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 186/467 (39%), Positives = 257/467 (55%), Gaps = 44/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL R+   F  I P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    E 
Sbjct: 2   LHIHNTLTRRKEAFVPIAPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA ++       ++I  +T +      +D   L  L P H+PR
Sbjct: 61  -LTYVRNITDIDDKIIRRAGEK------GESIRTLTDRFIAAMHEDADALGVLRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ QM  LI  +   G AY A N ++ +      +YG FS + +DE + G RV    
Sbjct: 114 ATEYVMQMQSLIGRLRDKGLAYVAGNRDVCYSVRKFDSYGRFSGKSLDELRAGERVEVAG 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL
Sbjct: 174 DKQDPLDFVLWKHARTDEPDEVKWASPWGAGRPGWHIECSAMSSDLLGEQFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++LE       
Sbjct: 234 QFPHHENEIAQSEGA-HGHTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLE------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID---PAVL- 352
            +   V+R  +L  HYR P++++   L +A   L++          S   +D   P  + 
Sbjct: 286 RFDPEVVRFFILRAHYRSPLNYSDAHLEDARQALTRLYTALRNVQPSDAQVDWDEPHAMR 345

Query: 353 --SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-------------AHILGIEVC 397
             +A+ +D NT  A+  L +LA E+ ++                       A  L   + 
Sbjct: 346 FRAAMDDDFNTAEAVAVLFELANEANRSGSAATAAQLKGLGGVLGLLAREPASFLQGRMA 405

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            E  +K   +AIE +++ R +  K K ++ AD IR QL + G +LED
Sbjct: 406 GE-PDKGEGVAIESMIERRALAKKSKDYAEADRIRAQLLASGIVLED 451


>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 573

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 194/511 (37%), Positives = 271/511 (53%), Gaps = 80/511 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + + +YNT  R+   F+   P   + MYVCG T YD +HIG+AR  + FDVL+R LRY  
Sbjct: 72  RDMHLYNTRSRRREPFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFRYLRYLD 131

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+ 
Sbjct: 132 YE--VRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMAHLQCLPPSV 183

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI Q++ +I+ II +G AY  + ++ F   + P Y   S RK+D+ + G RV  
Sbjct: 184 EPRVSDHIDQIVTMIKQIIDNGCAYVVSGDVYFSVDNFPEYRKLSGRKLDDNRAGERVAV 243

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+ YLG  FDIHGGG DLI
Sbjct: 244 DERKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLI 303

Query: 242 FPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS   CC    + + N W+HNGF+N+ G+KMSKS GNFITI +++E     
Sbjct: 304 FPHHENEIAQSRAACC----DSSINYWVHNGFVNVNGQKMSKSLGNFITIRKVIEL---- 355

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGII 347
              +    +R+ +L THYR PI++TV++L  A   L    QT            +S G  
Sbjct: 356 ---YHPLALRMFLLGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQQDQSSSGDS 412

Query: 348 DPAVL------------SALYNDLNTVSAIQA-----------------------LHKLA 372
            P               +++ +DL+T  A+ A                       L  LA
Sbjct: 413 LPFTTTHCIEKLHEDFETSMSDDLHTSVALAAVSEPLKVMNDLLHTRKGKKQEKRLESLA 472

Query: 373 RESTKNHDLLPIFN--ASAHILGIEVCKEHLNKNISIAIEKLVQ---ERLILLKMKKFSS 427
               K   +L +     S++   ++  +    +   +  E+++Q   ER    K K+F  
Sbjct: 473 ALEEKVRMVLSVLGLMPSSYHEALQQLRGKALRRACVTEEQVLQKIEERTAARKAKQFGR 532

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +D IR +L + G  L D   PD     T W+
Sbjct: 533 SDEIRDELAALGIALMD--GPDG----TAWR 557


>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|109894904|sp|Q2SK40|SYC_HAHCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 467

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 184/481 (38%), Positives = 269/481 (55%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY++L ++  EF+ I    + +YVCG TVYD+ H+G+AR ++ FD++ R LR    + 
Sbjct: 2   LKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI+ RAR         +++  +T++      +D   L  L+PT +PR
Sbjct: 61  -VNYVRNITDVDDKILNRARDN------GESVDALTARFIDAMHEDERALGVLSPTSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +IQ ++  G+AY A+N ++ +      +YG  S++K+DE + G R+    
Sbjct: 114 ATGHIDEIIAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSKQKLDEIRAGARIEVDA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF+LWK + P E  W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 174 EKRSPADFVLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A    K  N W+H G + +   KMSKS GNF TI E+L+        +P
Sbjct: 234 HHENEIAQSEAATGC-KYVNYWMHAGAVRVNKEKMSKSLGNFFTIREILD-------KYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGII---DPAVLS--- 353
           A V+R  +  +HYR  ID++   L EA    E L +   +     G +   +P V     
Sbjct: 286 AEVVRYFLASSHYRSAIDYSDVALEEARSGLERLYNSIRELYGELGAVSMDEPLVGEYRE 345

Query: 354 ----ALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHILG-IEVCKEH 400
               A+ +D NT SA+  L  +A+        + T+   L       A +LG ++   E 
Sbjct: 346 RFHQAMDDDFNTSSAVAVLFDMAKAVNVAKKEDRTRALSLAKGMVDLAEVLGLLQADPES 405

Query: 401 LNK-------NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           L +        +S+A IE  + +R      K F+ +D IR  L+ KG +L D +   + Q
Sbjct: 406 LMQGEGEEVGGLSVAEIEDFIAQRNAARANKDFAESDRIRDLLKEKGVLLNDSREGTSWQ 465

Query: 453 R 453
           R
Sbjct: 466 R 466


>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 481

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 190/481 (39%), Positives = 264/481 (54%), Gaps = 63/481 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I+NTL  K  EF  +  + +RMYVCG TVYD+ HIG+AR  +VFD++ R L   Y E  V
Sbjct: 4   IFNTLTGKKEEFIPLQDNKVRMYVCGVTVYDYCHIGHARSSVVFDIIRRYL--IYKEYDV 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK----DTTRLACLAPTHQ 122
           T+V+N TDIDDKII+R+ +E          +I   + T++F+K    D  +L  + P   
Sbjct: 62  TFVKNFTDIDDKIIKRSNEE----------NIHWKELTEKFIKEHDYDMEKLNIMPPDFT 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT  I +MI L + +I  G+AY  + ++ +      +YG  S+R +DE   G RV   
Sbjct: 112 PKATEFIDEMIKLCEKLIEKGYAYVVDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVD 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK+S   EP WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DLIF
Sbjct: 172 ERKENPLDFALWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A+  +  A  WIHNGF+N+   KMSKS GNF TI E++       + +
Sbjct: 232 PHHENEIAQSEAAEE-KMFAKYWIHNGFVNINKEKMSKSLGNFFTIREII-------KEF 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPA-- 350
              V+R  +L THYR PIDF+   L EAE  L++          +  +   K  ++ A  
Sbjct: 284 DPEVLRFFLLTTHYRSPIDFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLEEANK 343

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASA--- 389
                     +++ +D N+  A+ A+    +E  +            ++L + N      
Sbjct: 344 IFENFKKEFETSMDDDFNSAKALAAIFDYIKEINRLLNQKVVKETYEEILKLTNNFKKIV 403

Query: 390 -HILGI--EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILE 443
             +LGI  +  KE    N+ I+  +L   ++ER    K K F  AD IR +LES G  L 
Sbjct: 404 NQVLGIINKTPKEWFASNLPISESELIKKIEERTNARKNKNFELADKIRDELESLGIELL 463

Query: 444 D 444
           D
Sbjct: 464 D 464


>gi|28377486|ref|NP_784378.1| cysteine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|38258341|sp|Q88YX9|SYC_LACPL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28270318|emb|CAD63219.1| cysteine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 470

 Score =  318 bits (815), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 185/479 (38%), Positives = 261/479 (54%), Gaps = 59/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   LSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T 
Sbjct: 57  CGYHVDYVSNFTDVDDKLIKRAAEDHTTVPA------VADRFIKAFMEDTTAVNIEPATV 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----T 177
            PRA+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G    T
Sbjct: 111 HPRASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHT 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K++P DF LWK + P E  WESPWG GRPGWHIECS MS+ YLG  FDIHGGG
Sbjct: 171 ADEETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
            DL FPHHENEIAQS    +  KT AN W+HNGF+ +  +  KMSKS GNF+T++++++T
Sbjct: 231 QDLEFPHHENEIAQSEA--KTGKTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKT 288

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGI 346
                      V+R  M  T YR PI +T   L EA   L K              +   
Sbjct: 289 VD-------PQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNG 341

Query: 347 IDPAVLSAL--------------YNDLNTVSAIQALHKL-----ARESTKNHDLLPIFNA 387
            D AV   L              +N  N V+A+  L KL     A+ + +   L+ +  A
Sbjct: 342 TDTAVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQKA 401

Query: 388 SAHILGI-EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + G+  V  E  N  ++  AI+ L+ ER    K K F+ AD IR  L+ +G +LED
Sbjct: 402 LVQLTGVFGVTFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKVQGIMLED 460


>gi|116049743|ref|YP_791450.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389817|ref|ZP_06879292.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|122258854|sp|Q02KT6|SYC_PSEAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115584964|gb|ABJ10979.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 460

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 263/483 (54%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +       ++   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------DEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------VLS 353
             V+R  ++ +HYR PI+++ + L EA+  L ++   +  KG+ + A            +
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRF--YNALKGLPEAAPAEAAEYVERFAA 343

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNASAHILGIE 395
           A+ +D NT  A   L +LARE  +  +                  LL +         ++
Sbjct: 344 AMDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAF-LQ 402

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              E   K  +  +E L+Q RL     K ++ +D IR QL + G +LED      G+  T
Sbjct: 403 AGAE--GKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLED------GKGGT 454

Query: 456 RWK 458
            W+
Sbjct: 455 TWR 457


>gi|323443098|gb|EGB00718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 466

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 177/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRIFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++   E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   + +   AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHV-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQSIILED 456


>gi|219870367|ref|YP_002474742.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254781682|sp|B8F392|SYC_HAEPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219690571|gb|ACL31794.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 459

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 182/480 (37%), Positives = 257/480 (53%), Gaps = 48/480 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KIYNTL+R+  EF+ I P ++ MYVCG TVYD  H G+ R  + FDV+ R LRY  Y  
Sbjct: 2   LKIYNTLKREKEEFKPIHPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + YVRNITD+DDKII+R      S+  N+    +  +   +  KD   L  L P  +P
Sbjct: 61  --LRYVRNITDVDDKIIKR------SLENNETCDQLVDRMIIEMHKDFDALNILRPDVEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT HIP++I +++ ++  GHAY A + +++F+  S   YG+ SR+ +++ + G RV  K
Sbjct: 113 RATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIK 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EP W+SPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+F
Sbjct: 173 SVKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA   +   N W+H G L +   KMSKS  NF TI ++L         +
Sbjct: 233 PHHENEIAQSCCA-HGDDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDIL-------NKY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAVLS 353
               +R   L   YR  +D++ + +  A   L +         W            A   
Sbjct: 285 DCESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNVELVENDQYVTAFKE 344

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI------EVCKE 399
           ++ +D NT  A+  L +LARE  K         + L       A +LG+         + 
Sbjct: 345 SMDDDFNTPGALAVLFELAREVNKLKAENQAEANKLAARLKQLAGVLGLLEQDPETFLQG 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE  +++R      K ++ AD  R +L + G +LED      G   T W++
Sbjct: 405 DANNDEVAEIEAFIKQRNEARASKNWAVADEARNKLTAMGIVLED------GANGTTWRR 458


>gi|293390637|ref|ZP_06634971.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951171|gb|EFE01290.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 469

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 166/385 (43%), Positives = 233/385 (60%), Gaps = 30/385 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 12  LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYD- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 71  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVVEMYKDFDALNILRPDFEPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S  +YG  SR+ +++ + G R+    
Sbjct: 124 ATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEINE 183

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 184 IKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFP 243

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 244 HHENEIAQSCCA-HGNQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYD 295

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A   L +    +  +GI   AV            
Sbjct: 296 AESVRYFLLTAHYRSQLNYSEENLNLAHGALERL--YTALRGIDKSAVAFGGENFVDAFR 353

Query: 353 SALYNDLNTVSAIQALHKLARESTK 377
            A+ +D NT +A+  L ++ARE  K
Sbjct: 354 EAMDDDFNTPNALSVLFEMARELNK 378


>gi|82750237|ref|YP_415978.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|109894947|sp|Q2YSD1|SYC_STAAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|82655768|emb|CAI80168.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 466

 Score =  318 bits (814), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 176/471 (37%), Positives = 270/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + ++P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQTVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     +N W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFSNYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|15596992|ref|NP_250486.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|218892253|ref|YP_002441120.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254240136|ref|ZP_04933458.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|21264027|sp|Q9I2U7|SYC_PSEAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735063|sp|B7VB84|SYC_PSEA8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|9947777|gb|AAG05184.1|AE004605_6 cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126193514|gb|EAZ57577.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218772479|emb|CAW28261.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 460

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 262/483 (54%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------VLS 353
             V+R  ++ +HYR PI+++ + L EA+  L ++   +  KG+ + A            +
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRF--YNALKGLPEAAPAEAAEYVERFAA 343

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNASAHILGIE 395
           A+ +D NT  A   L +LARE  +  +                  LL +         ++
Sbjct: 344 AMDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAF-LQ 402

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              E   K  +  +E L+Q RL     K ++ +D IR QL + G +LED      G+  T
Sbjct: 403 AGAE--GKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLED------GKGGT 454

Query: 456 RWK 458
            W+
Sbjct: 455 TWR 457


>gi|223042919|ref|ZP_03612967.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443773|gb|EEE49870.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 466

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 171/471 (36%), Positives = 262/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ ++                  + E E + +   + S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYIDQI 345

Query: 348 DPAVL---SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
           +  +    + + +D NT +A+ A + LA+ + K            H    ++   + +LG
Sbjct: 346 ETILRQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLHRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ N+ +   IEKL++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLKGKNENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILED 456


>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 466

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 186/487 (38%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  +VFD + R L +   + 
Sbjct: 4   IRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAVVFDTIRRYLEFRGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDK+I+ AR+   S+P       I  +  + + +D   L C      PR
Sbjct: 63  -VTYVSNFTDVDDKLIKAARELGESVPA------IAERFIEAYFEDIQALGCKKADIHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE + G R+     
Sbjct: 116 VTENIDAIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIGEK 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 176 KDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R    
Sbjct: 236 HENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------REIDP 287

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSK---------- 344
            V+R  ML  HYR PI+++          ++RL  A   L    Q ST+           
Sbjct: 288 QVLRFFMLSVHYRHPINYSEELLESARRGLERLKTAYSNLQHRLQASTNLTDNDEEWVSR 347

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKN----HDLLPIFNASAHIL 392
              I  + +  + +D NT + I  L +LA+       E T +    H  L  F   A +L
Sbjct: 348 IADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSEKVIHAFLREFEQLADVL 407

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + ++ L   +   IE L+Q+R    K + F+ AD IR +L +K  ILED   P    
Sbjct: 408 GLTLKQDEL---LDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILED--TPQG-- 460

Query: 453 RMTRWKQ 459
             TRWK+
Sbjct: 461 --TRWKR 465


>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|187631636|sp|A3QFX9|SYC_SHELP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 459

 Score =  318 bits (814), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 185/487 (37%), Positives = 267/487 (54%), Gaps = 60/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +        ++   +T + TQ+   D   L    P  +PR
Sbjct: 61  -VNFHRNITDVDDKIIKRATEN------GESCDALTERLTQEMYHDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ ++   HAY A+N +++F  +S P YG  S + +D+ + G RV    
Sbjct: 114 ATQHMPEIIEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 NKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLS------- 353
           A  +R  +L  HYR  ++++   L +A+  L +    +  KG+   ++ A  S       
Sbjct: 286 ASTVRYFLLSGHYRSQLNYSEDNLKQAKAALERL--YTALKGLDLSVEAAPASEYVAKFK 343

Query: 354 -ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEV-------------- 396
            A+ +D NT  A   L  +ARE    K  DL     A+A  LG+ +              
Sbjct: 344 EAMDDDFNTPEAYSVLFDMAREINRLKVDDL-----AAASALGVSMKQLGDVLGILEQDV 398

Query: 397 ---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               K   + +    IE L+ ER      K +++AD  R  L + G ILED      G  
Sbjct: 399 DGFFKGEGSDDEVAQIEALIAERNRARTEKDWAAADVARDGLNALGVILED------GPE 452

Query: 454 MTRWKQK 460
            T W++K
Sbjct: 453 GTTWRKK 459


>gi|313110488|ref|ZP_07796373.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310882875|gb|EFQ41469.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 460

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 262/483 (54%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------VLS 353
             V+R  ++ +HYR PI+++ + L EA+  L ++   +  KG+ + A            +
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRF--YNALKGLPEAAPAEAAEYVERFAA 343

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNASAHILGIE 395
           A+ +D NT  A   L +LARE  +  +                  LL +         ++
Sbjct: 344 AMDDDFNTAGACAVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAF-LQ 402

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              E   K  +  +E L+Q RL     K ++ +D IR QL + G +LED      G+  T
Sbjct: 403 AGAE--GKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLED------GKGGT 454

Query: 456 RWK 458
            W+
Sbjct: 455 TWR 457


>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
 gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
          Length = 520

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 185/500 (37%), Positives = 269/500 (53%), Gaps = 81/500 (16%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y   E
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        DA+S+ +S+   +F +D   L CL PTH+P
Sbjct: 81  --VNYVRNFTDIDDKIIKRANEAG-----EDALSL-SSRFIDEFHRDMYELQCLPPTHEP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI Q+I LI  I+ +G AY    ++ F   + P+Y S S RK+D+ + GTRV    
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   E     W+HNGF+N +G+KM+K++ NF TI +++         + 
Sbjct: 253 HHENELAQSQAA-YPESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YH 304

Query: 304 APVIRLAMLMTHYREPID--------------FTVQRLTEAEILLSKWPQTSTSKGIIDP 349
              +RL ++ THYR  ++              +  Q L + E  +S + +      I  P
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSI--P 362

Query: 350 A------------VLSALYNDLNTVSA--------------------------------- 364
           A             L  + +DL+T +A                                 
Sbjct: 363 ADDQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDY 422

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA--IEKLVQERLILLKM 422
           IQAL  L  E T    +L +   S+  L  ++  + L +    A  +++++++R +  K 
Sbjct: 423 IQALVALQNEVTDKLSILGLMPMSS--LAEQLKDKALKRAGMTAEQLQQMIEQRTLARKN 480

Query: 423 KKFSSADYIRKQLESKGFIL 442
           K F+ +D IR +L + G  L
Sbjct: 481 KDFAESDRIRTELSALGIAL 500


>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 491

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 187/496 (37%), Positives = 269/496 (54%), Gaps = 72/496 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R   EF+ I P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR L+    + 
Sbjct: 2   LKIYNTLARDKQEFKPIIPNTVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +   SI        +T +      +D   L    P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIKRAAENKESI------HALTQRFIDAMHEDADTLGVQRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ ++  +  +G AY+A + ++ +       YG  S + +++ + G RV    
Sbjct: 114 ATQYVPQMLEMVAQLEQNGLAYQAADGDVNYAVRKFDGYGKLSGKSLEDLRAGERVEVVS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   E     W+S WG+GRPGWH+ECSAM+S  LG  FDIHGGG DL
Sbjct: 174 DKHDPLDFVLWKHAKDGEADEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A R +   N W+HNGF+ ++  KMSKS GNF TI E+L       +
Sbjct: 234 QFPHHENEIAQSEGAHRCQYV-NYWMHNGFVRVDNEKMSKSLGNFFTIREVL-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------------SKWP 338
            + A V+R  +L  HYR P++++   L +A+  L                      S++P
Sbjct: 286 KYDAEVVRFFILRAHYRSPLNYSDVHLDDAKGALTRLYTALKSAPSSSILPPEGEGSEFP 345

Query: 339 QTST----SKGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FN 386
             S      +G+ID          SA+ +D NT  AI  L  LA E  ++  +       
Sbjct: 346 SPSGRGARGEGVIDWDTPHAARFKSAMDDDFNTPEAIAVLFDLANEVNRSQSVTAAAELK 405

Query: 387 ASAHILGI------EVCKEHLNKNISIA------------IEKLVQERLILLKMKKFSSA 428
             A +LG+      +  +   + N+++             I+ L++ R+   K K F+ A
Sbjct: 406 TLAGVLGLLQRDPQDFLQGRASMNLTVPTPTLEASGGALDIDALIEARIAAKKSKNFAEA 465

Query: 429 DYIRKQLESKGFILED 444
           D IRK+L   G +LED
Sbjct: 466 DRIRKELLGAGIVLED 481


>gi|312885230|ref|ZP_07744908.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367089|gb|EFP94663.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 459

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 182/480 (37%), Positives = 266/480 (55%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I+   I MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII RA +       N++   +T +   +  +D   L    P  +P+
Sbjct: 61  -LTFVRNITDIDDKIITRANEN------NESCEALTERLIGEMHRDFDALNMKRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATEYIQEIIQLVEKLIERGFAYVADNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L+        + 
Sbjct: 234 HHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           +  +R  ++  HYR  ++++ + L +A   L +   +     +  PA            A
Sbjct: 286 SETVRYFLMSGHYRSQLNYSEENLNQARAGLERLYTSLRGLDLTVPAADGEEYVSRFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARE-----STKNHD---LLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE     +T N     L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRVKATDNEHASALGSLLRELADVIGILHQDPEAFLQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +K+    IE L++ R      K +++AD  R +L + G +LED      G   T W++K
Sbjct: 406 DDKDQVAEIEALIKLRNDSRAAKDWATADVARDKLTAMGIVLED------GPSGTTWRRK 459


>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|109894958|sp|Q31H54|SYC_THICR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 456

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 186/460 (40%), Positives = 259/460 (56%), Gaps = 36/460 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  I P+ + +YVCG TVYD+ H+G+AR M+VFD + R LR    + 
Sbjct: 3   LKIYNTETRQKETFTPIQPNKVGLYVCGVTVYDYCHVGHARVMVVFDTVVRHLRSLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +   SI        +TS+      +D   L  L P  +P+
Sbjct: 62  -VTYVRNITDIDDKIIQRALENKESI------QSLTSRFIDAMHEDEKALNVLRPDMEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ ++  +I  +I    AY A N ++ F   +  +YG  S + I+E   G+RV    
Sbjct: 115 ATEYMDEIETMISTLIEKDFAYPAENGDVYFHVKADDDYGRLSGKNIEELDSGSRVEINS 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK S   EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGGLDL FP
Sbjct: 175 VKKDPLDFVLWKASKENEPAWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLSFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H GF+ ++  KMSKS GNF TI E+L       + + 
Sbjct: 235 HHENEIAQSECATG-EHYVNSWMHCGFVRIDDEKMSKSLGNFFTIREVL-------KQYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
             VIR  +L +HYR P++++ + L  A+  + +           Q   ++  ++   ++A
Sbjct: 287 PEVIRYFLLASHYRSPVNYSEENLDVAKASVGRLYSALELVPADQAEPAESKLEAEFMAA 346

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG-IEVCKEHLNKN------- 404
           + +D NT  A+  L +LA+E  K     L  +    A+ +G +E   E   K+       
Sbjct: 347 MNDDFNTPQAMAVLFELAKEVNKQKSPGLAALLKKLANQIGLLEQTAESFFKSQPSDSDL 406

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               IE L+ ER    K K FS +D IR +L ++G  L D
Sbjct: 407 TDEMIEALIVERAEARKAKDFSRSDEIRDELLAQGIELLD 446


>gi|224475678|ref|YP_002633284.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781694|sp|B9DKW3|SYC_STACT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222420285|emb|CAL27099.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 466

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 264/471 (56%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ ++P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   + 
Sbjct: 2   ITLYNTLTRQKEPFEPLEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  +  Q F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKLIKRSKE------LNESVPEIADRYIQAFYEDTGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDDIIEFIKDLVDKGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIESGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G+GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYNELGETIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNF+ +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFVLVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTV-----------------QRLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ +                 Q + E E + +     S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVESAKSGLERIRNSYQAIEEREAIATDIEDQSEYIEQI 345

Query: 348 DPAVLS---ALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILG 393
           D  +      + +D NT +AI   + LA+       E+T +  ++     +F   + +LG
Sbjct: 346 DQLLAQFEKVMDDDFNTANAITTWYDLAKLANKYVLENTTSKKVIERFKEVFQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I +  +  ++ +   IE L++ER    K K F+ AD IR QL+++  ILED
Sbjct: 406 IPLKGKQQDELLDEDIEALIEERNEARKNKDFARADEIRDQLKAQNIILED 456


>gi|49482759|ref|YP_039983.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295427067|ref|ZP_06819703.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|56749424|sp|Q6GJD9|SYC_STAAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49240888|emb|CAG39555.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295128855|gb|EFG58485.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
          Length = 466

 Score =  317 bits (813), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 176/471 (37%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + ++P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQTVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  ++  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFVISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166200148|sp|A4IJG8|SYC_GEOTN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
 gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 467

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 187/487 (38%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   + 
Sbjct: 4   IRLYNTLTRKKETFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDK+I  AR+   S+P       I  +  + + +D   L C      PR
Sbjct: 63  -VTYVSNFTDVDDKLIRAARELGESVPA------IAERFIEAYFEDIEALGCKKADIHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE + G R+     
Sbjct: 116 VTENIETIIEFIQALIDKGYAYEVDGDVYYRTRKFDGYGKLSHQSIDELQAGARIEVGEK 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 176 KDDPLDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R    
Sbjct: 236 HENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RQIDP 287

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
            V+R  ML  HYR PI+++          ++RL  A   L      ST+    D   LS 
Sbjct: 288 QVLRFFMLSVHYRHPINYSEELLESARRGLERLRTAYGNLQHRLGASTNLTDNDGEWLSR 347

Query: 355 LY-----------NDLNTVSAIQALHKLARE---------STKN--HDLLPIFNASAHIL 392
           L            +D NT + I  L +LA++         +++N  H  L  F     +L
Sbjct: 348 LADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSENVIHAFLREFEQLMDVL 407

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + +E L   +   IE L+++R    K + F+ AD IR +L++K  ILED   P    
Sbjct: 408 GLTLKQEEL---LDEEIEALIRQRNEARKNRDFALADRIRDELKAKNIILED--TPQG-- 460

Query: 453 RMTRWKQ 459
             TRWK+
Sbjct: 461 --TRWKR 465


>gi|188534564|ref|YP_001908361.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|229558632|sp|B2VBD5|SYC_ERWT9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188029606|emb|CAO97484.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 462

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 191/483 (39%), Positives = 260/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA++        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRAQEN------GESIEQLTNRMIGEMHKDFAALNILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +++ L++ +I   HAY A+N +++F   S P YGS SR+ +D+ + G RV    
Sbjct: 114 ATRHITEIVELVEKLIAREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++LE        +
Sbjct: 234 PHHENEIAQSTCA-HDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLE-------HY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGI--IDPAVLS 353
            A  +R  ++  HYR  +++    L +A        I L      +T  G    +     
Sbjct: 286 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFETRFRE 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT  A  AL  LARE  +           L         +LG+      +  + 
Sbjct: 346 AMDDDFNTPEAYSALFDLAREVNRMKAEAPAAADGLAARLRVLGGVLGLLEQDPEQFLQS 405

Query: 400 HLNKNIS--IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
             N N      IE L+Q R+     K ++ AD  R +L   G +LED      G   TRW
Sbjct: 406 GANSNDEEVAQIEALIQMRIDARNEKNWAQADVARDRLNEMGIVLED------GAGGTRW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 462

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 265/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LQIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA +       N+++  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LNYVRNVTDIDDKIIKRAAEN------NESVEELTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L +++I  GHAY A+N +++F+  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSTCAHE-GPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLQY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  +L  HYR  +++T + L +A   L + +     +   + PA           A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDKSVAPAGGEAFKARFCEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILG---------IEVC 397
           + +D NT  A   L  +ARE    K  D+      +A       +LG         ++  
Sbjct: 346 MNDDFNTPEAYSVLFDIAREINRLKTEDMAAANGMAAQLRELAKVLGLLEQEPEAFLQGG 405

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +  +      IE L+++R    + K ++ AD  R  L + G +LED          T W
Sbjct: 406 AQGEDDAEVAKIEALIKQRNDARQSKDWALADQARDALTAMGVVLEDSSAG------TTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511845|sp|C4LG04|SYC_TOLAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 463

 Score =  317 bits (812), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 186/490 (37%), Positives = 262/490 (53%), Gaps = 63/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITD+DDKII+RA +   S         +T +       D   L    P  +PR
Sbjct: 61  -VTFVRNITDVDDKIIKRAAENAESC------DALTERLIGDMHADFDALKLQRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+Q+++   +AY A++ +++F   S P YG  S + I++ + G RV  + 
Sbjct: 114 ATQHIGEIITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGARVDVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 SKRNPMDFVLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L+        + 
Sbjct: 234 HHENEIAQSCCAHHT-PYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVLKV-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---PAVLSALY---- 356
           A  +R  ++  HYR P++++   L +A   L +    +  +G+ D    A LSA +    
Sbjct: 286 AETVRYFLMSGHYRSPLNYSDLNLQQARASLERL--YTALRGVEDGEEQAALSAPFDERF 343

Query: 357 -----NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI---- 407
                +D NT  A   L  LAR+  +     P     A  + +  C   L   + +    
Sbjct: 344 KAAMDDDFNTPEAYSVLFDLARDLNRAKQDSP-----ADAVALAACLRRLGGVLGLLQQQ 398

Query: 408 -----------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                             IE L++ R      K ++ AD  R +L   G +LED      
Sbjct: 399 PEQFLQSGAAAETDDVAEIELLIKTRNDARASKNWALADEARNKLTEMGIVLED------ 452

Query: 451 GQRMTRWKQK 460
           G + T W++K
Sbjct: 453 GPQGTTWRRK 462


>gi|300715706|ref|YP_003740509.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061542|emb|CAX58656.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 462

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 263/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        + + ++T++   +  KD   L  L P  +PR
Sbjct: 60  SLNYVRNITDIDDKIIKRANEN------GETVEVLTNRMIGEMHKDFAALNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT HI ++I ++  +I   HAY A+N +++F   S P YG  SR+ +++ + G RV  E+
Sbjct: 114 ATRHISEIIEIVSKLIDREHAYVASNGDVMFSVPSDPQYGQLSRQDLEQLQAGARVEVEQ 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKANEPSWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L+        +
Sbjct: 234 PHHENEIAQSTCAHE-GPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQ-------HF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLS 353
            A  +R  ++  HYR  +++    L +A   L + +     +    +PA           
Sbjct: 286 DAETVRCFLMSGHYRSQLNYGEDNLKQARSALERLYTAIRNTDSSAEPAGGEVFETRFRE 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
           A+ +D NT  A  AL  +ARE  +         + L       A +LG+      L    
Sbjct: 346 AMDDDFNTPEAYSALFDMAREVNRLKAEDMSAANGLAAKLRQLAGVLGLLEQDPELFLQN 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               N +    IE L+++RL   + K ++ AD  R +L + G +LED      G + T W
Sbjct: 406 GAQSNDDEVAEIEALIRQRLDARREKNWAQADMARDKLVAMGIVLED------GPQGTSW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|239636927|ref|ZP_04677925.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597475|gb|EEQ79974.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 466

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 173/471 (36%), Positives = 261/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VVYVSNFTDVDDKLIKRSKE------LNESVPEIADKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T    +YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKKLVDEGYAYESNGDVYFRTRQFKDYGKLSHQSIDDLKVGARIEAGDQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTV-----------------QRLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ +                 Q + E E + +           I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVSAAKSGLERIRNSYQLIEEREAIATDIDNQEEYINQI 345

Query: 348 DPAVL---SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLP----IFNASAHILG 393
           D  +    + + +D NT +A+ A + LA+       E+  + +++     ++   + +LG
Sbjct: 346 DQILENFETVMDDDFNTANAVTAWYDLAKLANRYVLENVTSTNVIAKFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +     +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLKGNQQDDLLDEEIEKLIEERNEARKNKDFARADEIRDHLKEQNIILED 456


>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 483

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 187/503 (37%), Positives = 262/503 (52%), Gaps = 70/503 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT+ RK  EF  + P  + +YVCG T Y+  HIGNARP +V+DV++R L +   + 
Sbjct: 4   IRVYNTMTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII  A +E  +        +I ++  + + +   +L        PR
Sbjct: 63  -VTHVQNFTDVDDKIIREANKEGVTW------DVIANRYIKAYFEVMDKLHVRRAHVYPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HIP +I+ +Q +I HG+ Y  + ++ +      +YG  S R +D+   G RV     
Sbjct: 116 VSDHIPDIIHTVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVDER 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP W+SPWG+GRPGWHIECS MS+ YLG  FD HGGG DLIFPH
Sbjct: 176 KENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A         W+HNGF+ +   KMSKS GNF T+ ++L       + +  
Sbjct: 236 HENEIAQSEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDIL-------KEYEP 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID------------ 348
            V+R  +L THYR P+DF+  RL EA    E L +     +  KG+I             
Sbjct: 289 EVLRYFILQTHYRSPLDFSDARLKEASRSLERLRTAAQNLTELKGVISVGPDEDSLALRE 348

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFNAS-- 388
                  + L A+ +D NT  AI  L  L +E    H             L+ + + +  
Sbjct: 349 KVSGFVESFLEAMRDDFNTSLAISYLFALGKEINILHQSVMTGGQKPDGKLVDMMDKAWK 408

Query: 389 --AHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               I+GI         E  K+      + AIE L+ ER    K K F  AD IR +L  
Sbjct: 409 EMTSIIGILEEDPGAKTEAVKD--ADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQ 466

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
           KG +LED   P       RWK++
Sbjct: 467 KGILLED--TPQG----VRWKRQ 483


>gi|298693861|gb|ADI97083.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 466

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 177/471 (37%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEY--QGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++ + S+P       I  K    F +D   L     T  PR
Sbjct: 60  NVEYVSNFTDVDDKLIKRSQELNQSVPE------IAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++   E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----KGIID-- 348
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T+    +  ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNAS----AHILG 393
            A+L    + + +D NT +AI A + LA+       E+T + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILED 456


>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 462

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 188/486 (38%), Positives = 279/486 (57%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++   F  I+ + + +YVCG TVYD+ H+G+AR +++FDV+ R LR ++   
Sbjct: 2   LKIYNTLSKQKEIFHPINNNKVGIYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFSN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        + I  +T++      +D   L  L P  +PR
Sbjct: 61  -VEYVRNITDIDDKIIKRAVEN------KEDIYTLTNRFINAMHEDEHALGILPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN + Q+  +I+++I  G AY+A+N ++ +      NYG FSR+ +++ ++G R+  + 
Sbjct: 114 ATNTMEQIFCMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKFSRKNLNKLEIGARIKVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK S P EP W SPWG+GRPGWHIECSAMS+H+LG  FDIHGGG+DL FP
Sbjct: 174 AKKDPLDFVLWKMSKPNEPSWSSPWGKGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      NIW+H GF+N+  +KMSKS  NF TI  +L       +++ 
Sbjct: 234 HHENEIAQSEGANNC-TFVNIWMHVGFVNINNKKMSKSLNNFFTIRNVL-------KNYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
             ++R  ++ +HY  P++F+ + L +A+  LS+    +T +G+    V +          
Sbjct: 286 GEILRYFIMSSHYHSPLNFSDENLNKAKSSLSRL--YTTIRGLNTSNVRTEEISIHFDYS 343

Query: 354 -----ALYNDLNTVSAIQALHKLAR----ESTKNHD-------LLPIFNASAHILGIEVC 397
                AL +D NT  A+  L +LA+    +   N D       LL        IL +   
Sbjct: 344 VRFNEALDDDFNTPIALSVLFELAKIVNIQRENNTDQAKTLAQLLKKLGGYIGILQMNAD 403

Query: 398 KEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           K  L + IS++ E++   +  R      K F+ +DYIR +L     ILED  N       
Sbjct: 404 K-FLKQGISLSDEQINIKITNRNKARINKDFTLSDYIRDELAKFDIILEDNING------ 456

Query: 455 TRWKQK 460
           T W++K
Sbjct: 457 TTWRKK 462


>gi|289450440|ref|YP_003475062.1| cysteine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184987|gb|ADC91412.1| cysteine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 473

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 183/481 (38%), Positives = 262/481 (54%), Gaps = 61/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++++L  +  EF  ++P  ++MY CGPTVY++ H+GNARP +VFD+L R L Y  G K
Sbjct: 1   MQLFDSLTNQKREFIPLEPGKVKMYSCGPTVYNYFHLGNARPFVVFDLLRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I RA +E  ++        +  K   ++ KD   L     T QPR
Sbjct: 60  -VTFVQNFTDIDDKMIRRANEEGVTL------RELADKYIAEYFKDADGLGIKRATIQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  I  +I  +  ++  GHAY + + + F T S P+YG  S   +DE + G   RV   
Sbjct: 113 ATESIDAIIEQVGKLVAGGHAYVSTDGVYFSTRSFPDYGKLSHFHLDELEAGASERVNTG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K +PADF +WK   P EP W SPWG GRPGWHIECS+M + YLG   DIH GG DLIF
Sbjct: 173 ENKHDPADFAVWKFKKPGEPAWPSPWGEGRPGWHIECSSMINRYLGPTIDIHSGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   ++ A+ W+HNGF+N+   KMSKS GNF T+ +++       + +
Sbjct: 233 PHHENEIAQSECATG-KQLAHYWLHNGFINVNNEKMSKSLGNFFTVRDVV-------KHF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
           P  VIR  +L  HYR PI+F+ + L  A+  L++     ++                   
Sbjct: 285 PYDVIRFFLLTGHYRSPINFSDELLQAAQTGLTRLRNCYSAVQFKLKSKAESAESADKAA 344

Query: 344 ------KGIID---PAVLSALYNDLNTVSAIQALHKLARE----------STKNHDLLPI 384
                 +  ID    A ++A+ +DLNT  A+ A+    RE          +     +L  
Sbjct: 345 AAAESVRKSIDTARAAFIAAMDDDLNTPDALAAIFSWVREVNTLITSSPSAADCQAVLDF 404

Query: 385 FNASAHILGIE-VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           F+    +LG+   C+E     I   I  LV+ R    K K F+ AD +RKQ+   G+ L 
Sbjct: 405 FDELGDVLGLRWQCEE----AIPTEILALVEARTQAKKAKNFTLADELRKQITEAGYTLM 460

Query: 444 D 444
           D
Sbjct: 461 D 461


>gi|88860441|ref|ZP_01135079.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817639|gb|EAR27456.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 459

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 178/466 (38%), Positives = 264/466 (56%), Gaps = 44/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  +F+ +    I MYVCG T+YD+ H+G+AR  + FDV+ R  R+   + 
Sbjct: 2   VQIYNTLTRQKEQFKPMVAGKISMYVCGITIYDYCHVGHARTYVSFDVMNRYFRHLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII+RA +       N+ I+ +T + T+   +D   L  L    +P 
Sbjct: 61  -VTYVRNITDVDDKIIKRAHEN------NEEINDLTVRMTKAMHEDFNALNMLPADIEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP++I +++ +I  GHAY A N +++FD S+   YG+ S++ +   + G RV    
Sbjct: 114 VTGHIPEIITMVERLIEKGHAYIAGNGDVLFDVSTFAAYGALSQQDLSMLQAGARVEVDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++ P EP W SPWG GRPGWHIECSAMSS +LG  FDIHGGG DL FP
Sbjct: 174 GKDDPLDFVLWKKAKPEEPSWGSPWGAGRPGWHIECSAMSSKHLGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +K  N WIH G + +   KMSKS  NF T+ E+L       + + 
Sbjct: 234 HHENEIAQSCCASG-QKYVNTWIHTGMVQVNKEKMSKSLNNFFTVREVL-------KQYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----IDPAV-------L 352
              +R  ++  HYR  ++++ + L +A   L +    +  +G+    +D A         
Sbjct: 286 RETVRFFLINGHYRSQLNYSQENLDQARSSLERI--YTALRGVTPTPVDLAANEYVAKFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT  A+  + +LA+E        S+K  +L  +  A   +LGI         +
Sbjct: 344 QAMNDDFNTPEALPVVFELAKEINRVKDSDSSKAAELAFVLKAITEVLGIAQQEPESFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + +++    IE L+ +R      K ++ AD  R +L +   ILED
Sbjct: 404 GNQDEDEVAQIEALIAQRNQARADKNWALADDARDKLNAMNIILED 449


>gi|218134243|ref|ZP_03463047.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991618|gb|EEC57624.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
           43243]
          Length = 474

 Score =  317 bits (812), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 195/499 (39%), Positives = 266/499 (53%), Gaps = 70/499 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KIYNTL  K  EF  ++   ++MYVCGPTVY+  HIGNARPMIVFD + R L Y  
Sbjct: 4   KTNMKIYNTLTAKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYLEYKG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A +E  +        +I+++   +  KD   +     T 
Sbjct: 64  YE--VNYVSNFTDVDDKIIKAANEEGVTA------DVISTRYIAECKKDMAGMNVKPATK 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
            P AT  I  MI LIQ +I  G+AY  N  + + T     YG  S++ ID+ + G R   
Sbjct: 116 HPLATEEIDGMIELIQTLIDKGYAYNVNGTVYYRTRKFKGYGKLSKKNIDDLEAGHRDIK 175

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK     EP WESPW  GRPGWH ECS M+  YLG+  DIH GG 
Sbjct: 176 VAGGEEKEDPLDFVLWKPKKEGEPYWESPWSEGRPGWHTECSVMAKKYLGESIDIHAGGE 235

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A+ ++  +  W+HN FL +   KMSKS GNF T+ ++       
Sbjct: 236 DLIFPHHENEIAQSEAANGVQ-FSKYWMHNAFLKINNVKMSKSLGNFFTVRDI------- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPA---- 350
              +   V+R  ML  HYR P++F+ + +  A+  L +    +T+ G    +ID A    
Sbjct: 288 AAKYDLQVLRFFMLSAHYRNPLNFSEELMESAKNSLER---ITTAAGNLNHMIDNAQDRE 344

Query: 351 -------VLS-----------ALYNDLNTVSAIQALH---KLARESTKN-------HDLL 382
                  +L+           A+ +D NT  AI A+    KLA  S K+        D+L
Sbjct: 345 VSEEEKNILAQLDGMIKQFENAMDDDFNTADAITAIFDMVKLANTSCKSSDSKKFLQDVL 404

Query: 383 PIFNASAHILGIEVC--KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                +  ILG+EV   KE L+++I    + L+QER    K + F+ AD IR+ L  KG 
Sbjct: 405 DKIAGTCGILGLEVVSEKELLDEDI----DNLIQERQQARKDRNFARADEIRQLLLDKGI 460

Query: 441 ILEDYKNPDNGQRMTRWKQ 459
           +LED +         RWK+
Sbjct: 461 VLEDTREG------VRWKR 473


>gi|167769106|ref|ZP_02441159.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
           17241]
 gi|167668746|gb|EDS12876.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
           17241]
          Length = 462

 Score =  317 bits (811), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 181/473 (38%), Positives = 256/473 (54%), Gaps = 54/473 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+P  +RMY CGPTVY++ HIGNARP+ VFD L R L Y   + 
Sbjct: 1   MKIFNTLTRQKEEFVPIEPGKVRMYACGPTVYNYIHIGNARPICVFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I +A +E   I + +    +  +   +++ DT  L        PR
Sbjct: 60  -VTFVQNFTDIDDKLINKANEE--GITVRE----VAERYIGEYMTDTKGLGIRPADIHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I +++ +   G AYE +  + F +     YG  S + ++E + G R+     
Sbjct: 113 ATENIDTIINMVKTLEEKGFAYERDGSVYFRSRRFEEYGKLSHQPLEELEAGARIDVSDK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W SPWG GRPGWHIECSAM   +LG   DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSAMIRRHLGDTIDIHCGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C    E   + W+HNG++N++ RKMSKS GNF T+ E+ E  KFG      
Sbjct: 233 HENEIAQSECCTGAEYV-HYWMHNGYINVDNRKMSKSLGNFFTVREVAE--KFGYEP--- 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-------- 356
             I+  ML  HYR PI+++++ + +    L +      S   +D A+ SAL         
Sbjct: 287 --IKFMMLQAHYRSPINYSLEVIEQCRAALERLHNCRDS---LDFALESALGQGDWHAFR 341

Query: 357 ---------------NDLNTVSAIQALHKLARE----------STKNHDLLPIFNASAHI 391
                          +DLNT   I AL ++AR+                 +  F+    +
Sbjct: 342 EKMDARAAQFVEAMDDDLNTADGIAALFEMARDINTYIAQPQPEEAVAYAVKRFDELCGV 401

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+       +K++   +E L+ ER    K K F+ AD IR QL   G +L+D
Sbjct: 402 LGL--LYNRASKDLDSEVEALIAERQAARKAKDFARADAIRDQLAGMGILLKD 452


>gi|301155906|emb|CBW15375.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 459

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 186/480 (38%), Positives = 270/480 (56%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +D+ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIID--PAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +         Q++ + G  +   A   A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVALGGENFVEAFREA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE        + K + L       A ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELAGILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GPNGTTWRKQ 459


>gi|148548000|ref|YP_001268102.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
 gi|187629852|sp|A5W458|SYC_PSEP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148512058|gb|ABQ78918.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 460

 Score =  317 bits (811), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 181/467 (38%), Positives = 255/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTRCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLS-AL 355
             V+R  ++ +HYR  I+++   L +A+  L ++       P+ +   G       S A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--------AHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  D  P   A           +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDPEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR QL + G +LED K 
Sbjct: 406 EGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452


>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 483

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 190/490 (38%), Positives = 257/490 (52%), Gaps = 74/490 (15%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           +YNT  R+  EF  ++P  +R+YVCG TVYD  HIG+AR  + FD +   +R++  +   
Sbjct: 5   VYNTQSRRKEEFIPLEPGVVRVYVCGVTVYDDPHIGHARCYVAFDAM---VRHFLAKGWR 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V YVRN TDIDDKII RA +             +  K  + F +D   L  L P+H+PRA
Sbjct: 62  VNYVRNFTDIDDKIIRRAAES------GLGWRELADKYIESFRQDMAALDVLPPSHEPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           T HI +MI  IQ ++  GHAY+    +++F   S   YG  SRR +++ + G RV     
Sbjct: 116 TEHIAEMIATIQTLMAKGHAYQIEGGDVLFAVESFDGYGKLSRRNLEDMQAGARVEVDPR 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S P EP W+SP G GRPGWHIEC+AMS  YLG+ FDIHGGG DL+FPH
Sbjct: 176 KKNPMDFVLWKASKPGEPSWDSPLGPGRPGWHIECTAMSGKYLGQTFDIHGGGEDLVFPH 235

Query: 245 HENEIAQ--SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HENEIAQ  +C    +   A+ W+HNGF+ +   KMSKS GNF TI ++L+  +      
Sbjct: 236 HENEIAQGEACTGHPL---AHYWLHNGFVRVNHEKMSKSLGNFFTIKDILKITR------ 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPA--VLSA 354
               +RL +L  HYR P+DF+   + EA   L +        Q   + G +D A   L+A
Sbjct: 287 -PEALRLFLLSKHYRSPLDFSDAAIKEAGAGLERLYTALQAAQERAAAGPLDAAGQALAA 345

Query: 355 ------------LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                       + +D NT  AI AL  LAR   K   L    +  A    +E+C   L 
Sbjct: 346 EIQALADEFEAGMDDDFNTARAIGALFGLARLGNK---LAAEPDGPAKGPLLELCARRLR 402

Query: 403 K---------------------------NISIA-IEKLVQERLILLKMKKFSSADYIRKQ 434
           +                            +  A IE L+ +R    K K F+ AD IR Q
Sbjct: 403 ELGGRLGLLRIDPAEFFRGAAGQTATQGGVGAADIEALIAQRNQARKDKNFAEADRIRDQ 462

Query: 435 LESKGFILED 444
           L++ G  L+D
Sbjct: 463 LKAMGVTLQD 472


>gi|241888786|ref|ZP_04776092.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864462|gb|EER68838.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 465

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 184/487 (37%), Positives = 267/487 (54%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E  S       S +T K    F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEEGIST------SELTEKYITAFFKDYDALGCKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I  ++  G AYEA  ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIINFIAKLVEEGFAYEAKGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W+SP+G GRPGWHIECS M+   LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGDTIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C + +   +N W+HN F+N++  KMSKS GNF  + +++            
Sbjct: 234 HENEIAQSECHNHV-PFSNYWMHNAFINIDNVKMSKSLGNFRLVKDII-------AEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLSA 354
            V+RL ML  HYR PI++T++ +  A+    K   +            S   +D  V++ 
Sbjct: 286 MVLRLFMLTVHYRTPINYTLENIELAKTNFEKIKTSYQNLQFRLNNDMSDEKLDTDVVAL 345

Query: 355 -----------LYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNAS----AHIL 392
                      + +D NT +A+ + +++ R S         N + L + NA+    + IL
Sbjct: 346 VTEELNKFEEYMQDDFNTANALSSWYEIVRISNSYTAKEAVNKETLELINAAFETYSSIL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI V ++  N   S  IE L+ ER    K + F+ AD IR  L+ +G ILED K      
Sbjct: 406 GISVKED--NTLDSEHIESLISEREEARKNRDFALADKIRDDLKEQGIILEDTK------ 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKK 464


>gi|167758881|ref|ZP_02431008.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
 gi|167663621|gb|EDS07751.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
          Length = 468

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 186/476 (39%), Positives = 260/476 (54%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTLSKQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E  S   +D IS    +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKRAIEEGVS---SDEIS---KRYIAECKKDMDGMNIKPATKNPM 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +IQ +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVDMIQTLIDKGYAYEKNGTVYYRTRKFEEYGKLSHKNLDDLRSGERSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSDGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+        + 
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREI-------SQQ 284

Query: 302 WPAPVIRLAMLMTHYREPIDFT----------VQRLTEA----EILLSKWPQTSTSKGII 347
           +   ++R  ML  HYR P++F+          ++R+  A    + LL      S ++   
Sbjct: 285 YDLQILRFFMLSAHYRSPLNFSADLMEASKSGLERIVNAADNLKFLLGNAKSESMTQEEE 344

Query: 348 DPAVLSALY---------NDLNTVSAIQALHKLAR--ESTKNHD--------LLPIFNAS 388
                +A Y         +D NT  AI ++  L +   +T + D        L  +    
Sbjct: 345 AAFAKTAEYVQEFERAMDDDFNTADAIASVFDLVKYINTTADADKSKEFLQNLFDLLVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LG+ V K+   + ++  IEK+++ER    K K F+ AD IR +L +KG +LED
Sbjct: 405 TDVLGLIVDKKE--EMLAEDIEKMIEERQAARKAKDFARADAIRDELLAKGIVLED 458


>gi|303240982|ref|ZP_07327492.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591407|gb|EFL61145.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 467

 Score =  316 bits (810), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 178/475 (37%), Positives = 257/475 (54%), Gaps = 53/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  I+   +RMY CGPTVY++ HIGNARP I+FD + R L Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPINEKEVRMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA +E   I + D    +  +  +++  D   L     T  P+
Sbjct: 60  -VKFVQNFTDIDDKMIKRANEE--GITVKD----LADRFIKEYFIDAKGLGIDEATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I LI+ +  +G AY  N ++ F       YG  S   +++  +G+ V     
Sbjct: 113 ATENIDAIIDLIKKLEENGFAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSVNVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF +WK   P EP W+SPWG+GRPGWHIECSAM++ YLG+  DIH GG DLIFPH
Sbjct: 173 KQNPMDFAVWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNGF+N+   KMSKS GNF T+ +++E        +  
Sbjct: 233 HENEIAQSEAASG-KPFAKYWMHNGFINVNNEKMSKSAGNFFTVRDIVE-------KFDY 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE-------------ILLSKWPQ----TSTSKGI- 346
            VIR  ML  HYR PI+F+   L +A+             + L +  Q    +   K + 
Sbjct: 285 EVIRFFMLSAHYRSPINFSADLLEQAQNGLERIYNCLDNLVYLGEHAQAKEMSDEEKSLQ 344

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG-------- 393
                I    +  + +DLNT  AI A+  + +E   N ++    N+S  I+         
Sbjct: 345 SRLLEIKGKFIEGMDDDLNTADAIAAIFDIVKEV--NSNITASSNSSKEIIDFSHSLIRE 402

Query: 394 ----IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + + ++    N+   +E L+ +R    K K +  +D IR +L+  G +LED
Sbjct: 403 LGGVLGIGQKQKENNLDSEVEALISQRQQARKEKNWKLSDEIRDKLKDMGIVLED 457


>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 461

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 185/480 (38%), Positives = 269/480 (56%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+N+L R+   FQ I+P  +RMYVCG TVYD+ H+G+AR ++VFDV+YR LR    + 
Sbjct: 2   LQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLRALGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+RNITDIDDKII RA +        +    +T +  Q   +D+  L  L PT +PR
Sbjct: 61  -VTYIRNITDIDDKIIRRANEN------GEPFQALTERFIQAMREDSEALGVLPPTDEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +++ ++Q +I  G AY A+N ++ +  S  P+YG  S +   + + G+RV    
Sbjct: 114 ATAHIGEILAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 174 SKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N+W+HNGF+ +   KMSKS GNF T+ E+L       R + 
Sbjct: 234 HHENEIAQSEGATG-EPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREIL-------RLYR 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVL-SAL 355
              +R  +L +HYR P+++    L +A   L++        P+ + ++G    A   +A+
Sbjct: 286 PEEVRYFILTSHYRSPLNYDDSALQKARAALTRLYTALRGLPEAAPAEGEAFRARFQAAM 345

Query: 356 YNDLNTVSAIQALHKLARE----STKNHDLLPIFNASAHILGIEVC------KEHLNKNI 405
            +D NT  A+  L +LARE     +   D      A    LG  +       + +L    
Sbjct: 346 DDDFNTPEALAVLFELAREINRLRSDGSDQAAAHGALLRELGAALGLLQDDPERYLRGGA 405

Query: 406 ------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                    IE ++ +R      + ++ AD +R+ L + G +LED      G + T W++
Sbjct: 406 DADGPSDAEIEAMIAQRRAARANRDWAEADRLREALTAAGIVLED------GPQGTTWRR 459


>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 472

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 185/494 (37%), Positives = 261/494 (52%), Gaps = 64/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN L RK   F  +    +  Y CGPTVYDF HIGNARP IVFDV  R L    G K
Sbjct: 3   LMLYNDLTRKKEPFIPLKEGEVGFYSCGPTVYDFFHIGNARPFIVFDVFRRYLEDI-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSI-PINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V +V+N TDIDDK+I RA +E  ++  + DA         +++ +D   L        P
Sbjct: 62  VV-FVQNFTDIDDKMINRANEEGITVKELADAF-------IKEYFEDADALGVRRADIYP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+H+ +++ ++Q +I  GHAY  + ++ F   S P YG  S++ I++ + G+R+    
Sbjct: 114 RATDHMKEIVEVVQTLIDKGHAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK   P EP WESPWG GRPGWHIECS MS+ YLG  FDIH GG DLIFP
Sbjct: 174 QKRHPLDFALWKAQKPGEPAWESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQ+  A  ++     W+HNG+L ++  KMSKS GNF+T+           + + 
Sbjct: 234 HHENEVAQAEAATGMQ-FVRFWLHNGYLLIDKEKMSKSLGNFLTVRN-------ARKKYS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWP------QTSTSKGIID-PAVL 352
              IR  ML  HYR PI+F+ + L +A    E L + W       Q+   K   D  A L
Sbjct: 286 PLAIRYFMLSAHYRSPINFSEEGLNQATGAVERLRNCWTDLEYALQSREQKEKDDTEAFL 345

Query: 353 S-----------ALYNDLNTVSAIQALHKLAR---------------ESTKNHDLLPIFN 386
           S            + +D NT  A+ ++ ++ R                           +
Sbjct: 346 SEIKQAETKFYEEMNDDFNTAGALGSVFEVVRLINTYLKDNSSIDFKVCKAAQTFFTKID 405

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               I+G+E  KE L+ +    IE +++ER    K + F+ +D IR QL  KG ILED  
Sbjct: 406 GIMGIMGLESEKEELDTS---EIESMIEERTAARKARDFAKSDAIRDQLAEKGIILED-- 460

Query: 447 NPDNGQRMTRWKQK 460
            P+     T+WK++
Sbjct: 461 TPEG----TKWKKQ 470


>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 458

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 185/463 (39%), Positives = 258/463 (55%), Gaps = 39/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +   +         +T +       D   L  + P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRAAETRVTC------DELTERLIGDMHADFDALGMVRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+Q+++   HAY A+N +++F   S  +YG  S + +++ + G RV    
Sbjct: 114 ATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGGDYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVL-SAL 355
           A  +R  ++  HYR  ++++   L +A   L +        P  + + G    A    A+
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDEQVARFKEAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILGI-----EVCKEHLN 402
            +D NT  A  AL  L RE    K  D++      A       +LGI     E   +   
Sbjct: 346 DDDFNTPEAYSALFDLVREINRQKAEDMVVAAALGARLRELGAVLGILQQDPEAFLKGDE 405

Query: 403 KNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  +A IE+L+ ER      K +++AD  R +L   G +LED
Sbjct: 406 ADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLED 448


>gi|229591304|ref|YP_002873423.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511840|sp|C3JYD3|SYC_PSEFS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229363170|emb|CAY50215.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 462

 Score =  316 bits (810), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 180/478 (37%), Positives = 261/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFDALTERMIAAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALY 356
             V+R  ++ +HYR  I+++   L +A+  L ++       P  + + G    A  + + 
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAGGEAFVARFTEVM 345

Query: 357 N-DLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGI------EVCKEHL 401
           N D  T  A   L ++ RE  +  +                A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMKPEDFLQAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A ++ L+Q RL     K ++ +D IR QL + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVDALIQARLAARANKDWAESDRIRDQLTAMGVVLED------GKGGTTWR 457


>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|187631638|sp|A8FTH6|SYC_SHESH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 459

 Score =  316 bits (809), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 187/484 (38%), Positives = 263/484 (54%), Gaps = 54/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RNITD+DDKII+RA +   S         +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFLRNITDVDDKIIKRANENKESC------ESLTERLIGEMHRDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I   HAY   N +++F  SS P YG  S + +D+ + G RV  + 
Sbjct: 114 ATLHIPEIIDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSCCAHNT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLE-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLS---A 354
           A  +R  +L  HYR  ++++   L +A+  L       K    S      D  V     A
Sbjct: 286 AATVRYFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVEAASADEYVAKFKVA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH------LNKNISI- 407
           + +D NT  A   L ++ RE  +   L    NA A  LG+++ KE       L++++   
Sbjct: 346 MDDDFNTPEAYSVLFEMVREINR---LKEADNAKASSLGVKL-KELADVLGILDQDVDTF 401

Query: 408 -----------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                       IE L+ ER      K + +AD  R  L + G ILED      G   T 
Sbjct: 402 FKGEGSTDEVAEIEALIAERNRARAEKDWPAADVARDGLNALGVILED------GPEGTT 455

Query: 457 WKQK 460
           W++K
Sbjct: 456 WRKK 459


>gi|320016265|gb|ADV99836.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 461

 Score =  316 bits (809), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P E  WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGESRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    KN D+      +      A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|152979432|ref|YP_001345061.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|187629819|sp|A6VQ79|SYC_ACTSZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150841155|gb|ABR75126.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 459

 Score =  316 bits (809), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 190/480 (39%), Positives = 264/480 (55%), Gaps = 48/480 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I+ + + MYVCG TVYD  H G+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTLTREKEEFKPINQNQVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRFL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N+    +  +   +  KD   L  L P  +PR
Sbjct: 60  NLRYVRNITDVDDKIIKRALEN------NETCDQLVERMIAEMHKDFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I ++  ++  GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVDALLQRGHAYLAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   E   N W+H G L +   KMSKS  NF TI ++L TK      + 
Sbjct: 234 HHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDIL-TK------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAVLSA 354
           A  +R   L   YR  +D++ + +  A   L +         W     ++     A   A
Sbjct: 286 AESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNSELPAQDQYVGAFKDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGI-----EVCKEH 400
           + +D NT  A+  L +LARE  K         NH L       A +LG+     E   + 
Sbjct: 346 MDDDFNTPGALAVLFELAREINKLKAENPAQANH-LAARLKHLAGVLGLLEQDPEAFLQG 404

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +N  +  IE L+++R      K +++AD  R  L+  G +LED      G   T W++
Sbjct: 405 GAENEEVGKIEALIKQRNDARAEKNWAAADAARDALKEMGVVLED------GANGTSWRK 458


>gi|254234889|ref|ZP_04928212.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126166820|gb|EAZ52331.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 460

 Score =  316 bits (809), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 262/483 (54%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------VLS 353
             V+R  ++ +HYR PI+++ + L EA+  L ++   +  KG+ + A            +
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRF--YNALKGLPEAAPAEAAEYVERFAA 343

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNASAHILGIE 395
           A+ +D NT  A   L +LARE  +  +                  LL +         ++
Sbjct: 344 AMDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAF-LQ 402

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              E   K  +  +E L+Q RL     K ++ +D IR +L + G +LED      G+  T
Sbjct: 403 AGAE--GKVDAAEVEALIQARLEARAAKNWAESDRIRDRLTAMGVVLED------GKGGT 454

Query: 456 RWK 458
            W+
Sbjct: 455 TWR 457


>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 461

 Score =  316 bits (809), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 275/482 (57%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F+ + P  + MYVCG T+YD+ HIG+ R  + FD + R LR+     
Sbjct: 2   LKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRF--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y+RNITD+DDKII+RA +       N++   +TS+ T+   +D   L  L P  +PR
Sbjct: 60  SLNYIRNITDVDDKIIKRAAEN------NESCDQLTSRFTEAMHQDFDALFMLRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+H+P++I +I+ +I  GHAY A NN+++F   S   YG  S + ++  + G+RV  + 
Sbjct: 114 VTDHMPEVIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK + P EP W SPWG GRPGWHIECSAM+  +LG+VFDIHGGG DL FP
Sbjct: 174 SKRNPLDFVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS  NF TI E+L   KF    + 
Sbjct: 234 HHENEIAQSCCAHH-GQYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVL---KF----FD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVL------ 352
           +  +R  ++  HYR  ++++   L +A   L +        T +    +D   L      
Sbjct: 286 SESVRYFLISGHYRSQLNYSEDNLKQARASLERLYNSVRDLTFSKDTPLDKTNLHYQQFI 345

Query: 353 SALYNDLNTVSAIQALHKLARE-------STKNHDL-LPIFNASAHILGI--EVCKEHLN 402
            A+ +D NT  A+  L  LA+E       + K   L   +    A++LG+  +  ++ L 
Sbjct: 346 KAMDDDFNTPGALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSAEQFLQ 405

Query: 403 ---KNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              KN  +A IE L+++R    + K ++SAD  R +L +   +LED      G   T W+
Sbjct: 406 GDEKNEEVAMIEALIKQRNDARQNKDWASADSARDKLAALKIVLED------GPGGTTWR 459

Query: 459 QK 460
           ++
Sbjct: 460 KQ 461


>gi|73663535|ref|YP_302316.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|109894949|sp|Q49V39|SYC_STAS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72496050|dbj|BAE19371.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 466

 Score =  316 bits (809), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 263/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+R+++      +++++  I  +    F +D   L     T  PR
Sbjct: 61  -VVFVSNFTDVDDKLIKRSKE------LDESVETIADRYIDAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+  +I  I++++  G+AYE+  ++ F T    +YG  S + +++ K+G R+ +   
Sbjct: 114 VMNHMDDIINFIKDLVDEGYAYESGGDVYFRTRKFQDYGKLSHQSLNDLKVGARIEQGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKQAKPGEISWESPFGEGRPGWHIECSVMAYHELGATIDIHAGGTDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNF+ +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFVLVHDII-------KQIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTV-----------------QRLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ +                 Q + E E + +     S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVEAAKSGLERVRNSYQAIEEREAIATDIEAQSDYIAEI 345

Query: 348 DPAV---LSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILG 393
           D  +    + + +D NT +AI A + LA+       E+T +  +L     ++   + +LG
Sbjct: 346 DKILEQFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTKVLGRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  ++ +   +E L++ER    K K F+ AD IR QL+ +  ILED
Sbjct: 406 VPLKGKDSDELLDEEVEALIEERNNARKDKDFARADEIRDQLKEQNIILED 456


>gi|315923786|ref|ZP_07920016.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622906|gb|EFV02857.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 465

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 178/476 (37%), Positives = 263/476 (55%), Gaps = 57/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ ++  EF  I+P  +RMY CGPTVY++ HIGNARP IVFDVL R L Y   + 
Sbjct: 1   MKLYNTMTQRKEEFVPIEPGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII R+ +E  +         I  K   ++ KD   L     T  PR
Sbjct: 60  -VTFVQNFTDVDDKIINRSHEEGCTA------KEIADKYIAEYFKDADALGIRRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++ +P++I +++ +   G AY     + +     P+YG  S + + + + G R+     
Sbjct: 113 VSDTMPEIIAMVKALEDRGLAYNVGGNVYYAVDRFPDYGKLSGQNVADLEAGARIDVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK++ P EP W+SPWGRGRPGWHIECSAMS  +LG+  DIHGGG DLIFPH
Sbjct: 173 KHSPLDFALWKKAKPGEPYWDSPWGRGRPGWHIECSAMSRKFLGETIDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  +   E  A  W+HNG++N+   KMSKS GNF T+ ++          +  
Sbjct: 233 HENEIAQSEGSCGCE-FARYWVHNGYININDEKMSKSKGNFFTVRDI-------AGKYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------------WP 338
            V+R+ MLM HYR P++F+ + L  A+  L +                          W 
Sbjct: 285 EVVRMFMLMAHYRSPVNFSDELLASAQNALERFYNAKNQMIYLADHAEDRKPSPDEAAWI 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDL---LPIFNAS 388
           Q+ T         ++A+ +DLNT  AI A+ +L R       ES+    +   L +F   
Sbjct: 345 QSLTQ---YKNGFIAAMNDDLNTADAIAAMFELVRAANTALSESSPKSAVTAALKLFREL 401

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A ++G+   ++  + ++   +E L+ ER    + + F+ AD IR +L ++G +LED
Sbjct: 402 AGVIGL--AEKEPDSHLESEVEALIAERQAARRARDFARADAIRDELAARGIVLED 455


>gi|325263764|ref|ZP_08130497.1| cysteine--tRNA ligase [Clostridium sp. D5]
 gi|324030802|gb|EGB92084.1| cysteine--tRNA ligase [Clostridium sp. D5]
          Length = 468

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 189/497 (38%), Positives = 263/497 (52%), Gaps = 72/497 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  +F  I+   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTLSKRKEDFVPIEEGKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E  +         ++ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEEGVTA------DEVSKRYIAECKKDMEGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVDMIGTLIEKGYAYEKNGTVYYRTRKFKEYGKLSHKNLDDLQSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFT-----------------------------VQRLTEAEI 332
           +   V+R  ML  HYR P++F+                             VQ +T AE 
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMDAAKTGLDRIITAADNLKFLKGNAKVQEMTSAE- 343

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLL 382
              K   T T + I   +   A+ +D NT  AI ++ +L +        ES+  +  DLL
Sbjct: 344 ---KEAFTKTQEYI--DSFERAMDDDFNTADAISSVFELVKYINTSADGESSAEYLQDLL 398

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            +      +LGI V K+   + ++  IE L++ER    K K F+ AD IR +L S+G +L
Sbjct: 399 DLLVKLTDVLGIIVEKDE--EMLAEDIEALIEERQAARKAKNFARADEIRDELLSRGIVL 456

Query: 443 EDYKNPDNGQRMTRWKQ 459
           ED +         +WK+
Sbjct: 457 EDTREG------VKWKK 467


>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
 gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
          Length = 563

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 183/505 (36%), Positives = 270/505 (53%), Gaps = 76/505 (15%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YNT+ R    F+      + MYVCG T YD +HIG+AR  + FDVLYR L++   +
Sbjct: 70  ELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLGYD 129

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            C  YVRN TD+DDKII RA +        D IS+ + +  ++F  D   L CL P+ +P
Sbjct: 130 VC--YVRNFTDVDDKIIARANELG-----EDPISL-SRRYCEEFHNDMVYLHCLPPSIEP 181

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
             ++H+PQ+I +I+ I+ +G AY  + ++ F     P YG  S RK+++ + G RV    
Sbjct: 182 CVSDHMPQIINMIKQILDNGCAYRIDGDVYFSIDGYPEYGKLSGRKLEDNRAGERVAVDS 241

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNPADF LWK +   EP WESPWG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+FP
Sbjct: 242 RKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFP 301

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSC A R     + W+HNGF+ +   KMSKS GNF TI ++++        + 
Sbjct: 302 HHENEIAQSCAACR-GSNISYWVHNGFVTINSEKMSKSLGNFFTIRQVIDL-------YH 353

Query: 304 APVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQ---------- 339
              +R  +L THYR P++++               Q L + E ++S+             
Sbjct: 354 PLALRFFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKDSVPSD 413

Query: 340 -------------TSTSKGIIDPAVLSALYNDLNTVS----------AIQALHKLAREST 376
                        TS S  +  P +L+AL + L  ++          ++ AL K+ R++ 
Sbjct: 414 TLDGINKFSDVFVTSMSDDLHTPVLLAALSDPLKIINDMLHTRKRIQSLAALEKIVRDAL 473

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ---ERLILLKMKKFSSADYIRK 433
               L+P   +      ++  +E   +   +  E+++Q   ER +  K + +  +D IRK
Sbjct: 474 SVLGLMPTTYSEV----LQQLREKALRRAKLTEEQVLQRIEERTVARKNRDYERSDAIRK 529

Query: 434 QLESKGFILEDYKNPDNGQRMTRWK 458
            L + G  L D  +PD     T W+
Sbjct: 530 DLATHGIALMD--SPDG----TSWR 548


>gi|292898782|ref|YP_003538151.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198630|emb|CBJ45738.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
          Length = 462

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 193/483 (39%), Positives = 261/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T +   +  KD   L  L P  +PR
Sbjct: 61  -LNYVRNITDIDDKIIKRAHEN------GESIEQLTQRMIGEMHKDFAALNILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I   HAY A+N +++F   S   YGS SR+ +D+ + G RV    
Sbjct: 114 ATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A       N W+H+G + ++  KMSKS  NF T+ ++LE        +
Sbjct: 234 PHHENEIAQSTSA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE-------HY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGI--IDPAVLS 353
            A  +R  ++  HYR  +++    L +A        I L      +T  G    +    +
Sbjct: 286 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARFRA 345

Query: 354 ALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNASAHILG-----IEVCKE----- 399
           A+ +D NT  A  AL  LARE      +N   +    A   +LG     +E   E     
Sbjct: 346 AMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQS 405

Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
             ++N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   TRW
Sbjct: 406 GANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTRW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|222152121|ref|YP_002561281.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121250|dbj|BAH18585.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 469

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 259/473 (54%), Gaps = 49/473 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + I +YNTL R   +F  I+   ++MYVCGPTVY++ HIGNARP I FDV+ R   Y   
Sbjct: 5   RMITLYNTLTRSKEKFVPIEEGRVKMYVCGPTVYNYIHIGNARPAISFDVVRRYFEYRGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV N TD+DDK+I+ A +   ++P       I  +  + + +DT  L C   TH 
Sbjct: 65  E--VDYVSNFTDVDDKLIKAANELGETVPE------IADRFIEAYFEDTHALNCKTATHH 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I  +I  G+AYE+  ++ F T     YG  S + IDE K+G R+   
Sbjct: 117 PRVMDHMEDIIEFIDELIKKGYAYESGGDVYFRTRKFEGYGKLSHQSIDELKVGARIQAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +  DF LWK + P E  W+SPWG GRPGWHIECS M+  +LG   DIH GG DL F
Sbjct: 177 ELKDDALDFALWKTAKPGEISWQSPWGEGRPGWHIECSVMAKKHLGDSIDIHAGGSDLTF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNDT-TFANYWLHNGFINIDNEKMSKSLGNFILVHDII-------KEI 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTSKGIIDPAVL------- 352
              V+R  M+  HYR PI++ ++ +  A+  L +     Q    +  I   V+       
Sbjct: 289 DPNVLRFFMISVHYRNPINYNMELVASAKAGLERIQNAYQAMKERQAISVDVVNHAETIL 348

Query: 353 ----------SALYNDLNTVSAIQALHKLARES-----TKNHDL------LPIFNASAHI 391
                     +A+ +D NT +AI A ++LA+++       + DL      + +F   + +
Sbjct: 349 VIDNILKQFETAMDDDFNTANAITAWYELAKQANIYNQNPSTDLKVINRFIEVFEVFSEV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+++  +  +  +   +E+L++ER    K K F  AD IR  L+++  ILED
Sbjct: 409 LGVKL--DTSDTLLDEEVERLIEERQEARKNKDFKRADEIRDALKAQNIILED 459


>gi|291550109|emb|CBL26371.1| cysteinyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 468

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 184/476 (38%), Positives = 257/476 (53%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ ++  EF  ++   ++MYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTMSKRKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKNYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  +         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVTA------EEISQRYIAECKKDMDGMNIEPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I+ +I  G+AYE N  + + T    +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEIDGMISMIETLIEKGYAYEKNGTVYYRTRKFKDYGKLSHKNLDDLQSGGRTLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP W SPWG GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  +  W+HNGFLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FSRYWMHNGFLNIDNRKMSKSLGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------------WPQTST 342
           +   V+R  ML  HYR P++F+ + +  A+  L +                     +T  
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKSGLERIITAADRLKFLMGSAKTEDMAETEA 344

Query: 343 SKGIIDPAVL----SALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNAS 388
            K       +    SA+ +D NT  AI A+  L +        +S+K +  +L       
Sbjct: 345 EKFAKSAEYVGNFESAMDDDFNTADAIAAVFDLVKFINTMTDEDSSKEYLENLFDRLVRL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LGI V KE  ++ +   IE L+ ER    K K F+ AD IR +L +KG +L+D
Sbjct: 405 TEVLGIIVDKE--DEILDSDIEALIAERQAARKEKNFARADEIRDELLAKGIVLKD 458


>gi|292487539|ref|YP_003530411.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|291552958|emb|CBA20003.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 502

 Score =  315 bits (808), Expect = 7e-84,   Method: Compositional matrix adjust.
 Identities = 193/483 (39%), Positives = 261/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 42  LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 100

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T +   +  KD   L  L P  +PR
Sbjct: 101 -LNYVRNITDIDDKIIKRAHEN------GESIEQLTQRMIGEMHKDFAALNILPPDLEPR 153

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I   HAY A+N +++F   S   YGS SR+ +D+ + G RV    
Sbjct: 154 ATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTA 213

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 214 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 273

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A       N W+H+G + ++  KMSKS  NF T+ ++LE        +
Sbjct: 274 PHHENEIAQSTSA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE-------HY 325

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGI--IDPAVLS 353
            A  +R  ++  HYR  +++    L +A        I L      +T  G    +    +
Sbjct: 326 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARFRA 385

Query: 354 ALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNASAHILG-----IEVCKE----- 399
           A+ +D NT  A  AL  LARE      +N   +    A   +LG     +E   E     
Sbjct: 386 AMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQS 445

Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
             ++N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   TRW
Sbjct: 446 GANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTRW 499

Query: 458 KQK 460
           ++K
Sbjct: 500 RRK 502


>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 460

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 186/483 (38%), Positives = 265/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP++I L+Q +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIPEIIELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGARVDVET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    K  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-KYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++ + L +A   L +    ++ +G+     PA          
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERL--YTSLRGLDLNAAPAGGEEYVSRFT 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|237741373|ref|ZP_04571854.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294784133|ref|ZP_06749434.1| cysteine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|229430905|gb|EEO41117.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294488203|gb|EFG35548.1| cysteine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 473

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 274/482 (56%), Gaps = 55/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIENVSIKE------IAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L  K F GR  
Sbjct: 234 PHHENERAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL--KYFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGI------- 346
              VIRL +L +HYR+P++F+   L + +  L +   T            KGI       
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
                I+   + A+  D NT  A+  + +L +   K  D + I                 
Sbjct: 346 ATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLVM 405

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 MIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KN 447
           K+
Sbjct: 466 KD 467


>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225305|sp|A4Y5H9|SYC_SHEPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 461

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 264/483 (54%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 4   LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 63  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDFEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A++ +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 116 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 176 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 236 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++   L +A   L +     T+   +D  V            
Sbjct: 288 AETVRYFLLSGHYRSQLNYSEDNLKQARSALER---LYTAIKDVDLTVAAAPAEEFIVKF 344

Query: 353 -SALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHILGI------EVC 397
            +A+ +D NT  A   L  + R        +  K   L       A +LG+         
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFF 404

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K   + +    IE L+ ER      K +++AD  R +L+  G +LED      G   T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARSEKDWAAADVARNRLDILGVVLED------GPSGTTW 458

Query: 458 KQK 460
           ++K
Sbjct: 459 RKK 461


>gi|34762389|ref|ZP_00143391.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887971|gb|EAA25037.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 473

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 274/482 (56%), Gaps = 55/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIENVSIKE------IAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L  K F GR  
Sbjct: 234 PHHENERAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL--KYFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGI------- 346
              VIRL +L +HYR+P++F+   L + +  L +   T            KGI       
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
                I+   + A+  D NT  A+  + +L +   K  D + I                 
Sbjct: 346 ATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLVM 405

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KN 447
           K+
Sbjct: 466 KD 467


>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 473

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 179/458 (39%), Positives = 257/458 (56%), Gaps = 36/458 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YN+L R+   F   +P  I MYVCG TVYD+ HIG+AR M+VFD + R LR      
Sbjct: 24  LQFYNSLTRQKEAFIPREPGKIGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRA--SGY 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII RA +        + I  +T++      +D   L C  P  +PR
Sbjct: 82  ALKYVRNITDIDDKIIARAHEN------GEPIDALTARFITAMHEDEAALGCQRPDVEPR 135

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  MI L+Q +I  GHAY A+N ++ +   S P YG  + R +D+ + G R+    
Sbjct: 136 ATAAVSGMIELVQTLIAKGHAYAADNGDVYYAVRSFPAYGKLANRSLDDLRAGERIAVNE 195

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP W+SPWG+GRPGWHIECS M +  LG+ FDIHGGG+DL FP
Sbjct: 196 AKKDPLDFVLWKAAKPGEPAWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMDLKFP 255

Query: 244 HHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HHE EIAQS   C        N WIHNGF+ ++  KMSKS GNF T+ ++L  KK+ G +
Sbjct: 256 HHECEIAQSEGACG---HPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDVL--KKYDGET 310

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLS----A 354
                +R  +L +HYR P++++   L EA+  L++       + + G +D   ++    A
Sbjct: 311 -----LRAFILSSHYRGPLNYSDAALDEAKKALTRLYSALDKAPADGAMDADAVAAFDEA 365

Query: 355 LYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGI------EVCKEHLNKNISI 407
           + +D NT  A   L  LAR  ++    L       +  LG+      +  K   + ++S 
Sbjct: 366 MNDDFNTPKAFAVLFDLARRLNSGETALAATLKTLSGRLGLLQQNPADWLKGENSGSLSE 425

Query: 408 A-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A I   +  R      K ++ AD IR +L ++G I++D
Sbjct: 426 ADILARIHARAEAKAAKDYARADAIRAELAAQGIIIKD 463


>gi|260495810|ref|ZP_05815931.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260196657|gb|EEW94183.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 472

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 273/482 (56%), Gaps = 56/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR--DY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT++L        +P
Sbjct: 60  KVTYVQNFTDVDDKMINKANIENVSI------KEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           RAT++I +MI +IQ +I  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 RATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++ + G KMSKS G+FI + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCACG-GTFARYWMHNGYIKINGEKMSKS-GSFILLRDIL--KHFEGR-- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P+DF+ + L + +  L +   T                      
Sbjct: 288 ---VIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQELL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
            +K  ++   + A+  D NT  A+  + +L +   K  D   I   S             
Sbjct: 345 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKKSLEVIDEVYSYLVM 404

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 405 IIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 464

Query: 446 KN 447
           K+
Sbjct: 465 KD 466


>gi|225574357|ref|ZP_03782967.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038413|gb|EEG48659.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
           10507]
          Length = 484

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 194/484 (40%), Positives = 263/484 (54%), Gaps = 64/484 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+KIYNTL ++  EF  ++   ++MYVCGPTVY+  HIGNARPMIVFD   R + Y  G
Sbjct: 13  EKMKIYNTLSKRKEEFIPLEEGRVKMYVCGPTVYNLIHIGNARPMIVFDTARRYMEYK-G 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V +V N TD+DDKII +A +E  +         I+ +  ++  KD   +     T  
Sbjct: 72  YK-VNFVSNFTDVDDKIIAKANEEGVTA------DEISKRYIEECKKDMEGMNVRPATTH 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
           P AT  I  M+ +IQ +I  G AY  A+  + F       YG  S + +D+ + G R   
Sbjct: 125 PLATEEIEGMVEMIQTLIDKGFAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRALQ 184

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V  +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG 
Sbjct: 185 VSGEEQKEDPLDFVLWKPRKEGEPAWPSPWCEGRPGWHIECSVMSKKYLGEEIDIHAGGE 244

Query: 239 DLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DLIFPHHENEIAQS CC  ++   A  W+HNGFLN++ +KMSKS GNF T+ E+ E    
Sbjct: 245 DLIFPHHENEIAQSECCNGKV--FARYWMHNGFLNIDNKKMSKSLGNFFTVREIAE---- 298

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-----------------------EILL 334
               +   V+R  ML  HYR P++F+ + L EA                       +I +
Sbjct: 299 ---QYDLQVLRFFMLNAHYRSPLNFS-RDLMEASKNSLERILNGAERLRFLADGAKKIEI 354

Query: 335 SKWPQTS--TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLL 382
           S   Q S   +K I       A+ +D NT  A+ A+ +L +        ES+K +  ++ 
Sbjct: 355 SPQEQESLNEAKKIYVSKFEEAMDDDFNTADALAAVFELVKFANTQINEESSKGYVVEVY 414

Query: 383 PIFNASAHILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            I      +LG  IE  KE L+++    IE+L+ ER    KMK F+ AD IR QL + G 
Sbjct: 415 AILKQLCDVLGLIIEKEKEVLDED----IERLIAERQAARKMKNFAKADEIRDQLTNMGI 470

Query: 441 ILED 444
           ILED
Sbjct: 471 ILED 474


>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 463

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 181/470 (38%), Positives = 257/470 (54%), Gaps = 48/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA +       N+    +TS+   +  KD   L    P  +P 
Sbjct: 60  SLTYVRNVTDVDDKIIKRAAEN------NETCDQLTSRMLAEMHKDFDALNLERPDLEPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L+Q +I   HAY  AN +++F   S P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHISEIIQLVQRLIERDHAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  ++  HYR  ++++ + L +A   L +    +  +G+   AV            
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERL--YTALRGMDTNAVAAGGEEFEARFR 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGI---------- 394
           +A+ +D NT  A   L  +ARE    K  D+      +      AH+LG+          
Sbjct: 344 AAMDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGLAAELRKLAHVLGLLAQDPEQFLQ 403

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +  ++ N    IE L+++R      K ++ AD  R +L   G +LED
Sbjct: 404 SSAQTDVDNNEVSEIEALIKQRNDARSSKDWALADSARDRLNEMGIVLED 453


>gi|242372747|ref|ZP_04818321.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349520|gb|EES41121.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 466

 Score =  315 bits (808), Expect = 8e-84,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 261/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFNGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ ++                  + E E + +   + +     I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHTEYMNQI 345

Query: 348 DPAVL---SALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNA-------SAHILG 393
           D  +    + + +D NT +A+ A + LA+ + K    N     +FN         + +LG
Sbjct: 346 DEILKQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVFNKFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  ++ +   IEKL++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLKGKEADELLDEEIEKLIEERNEARKNKDFARADEIRDMLKERNIILED 456


>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|109894895|sp|Q47HK6|SYC_DECAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 456

 Score =  315 bits (807), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 184/465 (39%), Positives = 266/465 (57%), Gaps = 45/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L+R+   F  I+P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR L+    + 
Sbjct: 2   LKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA      I   + I  +T++      +D   L    P ++PR
Sbjct: 61  -VTYVRNITDIDDKIIKRA------IENGETIQQLTNRFIAFMHEDADALGVQRPDYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P+M+ LI  +  +G AY+A++ ++ +     P YG  S + +D+ + G RV    
Sbjct: 114 ATEYVPEMLDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGERVEVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQS----CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           HHENEIAQS    CC        N W+HNGF+ ++  KMSKS GNF TI  +LE      
Sbjct: 234 HHENEIAQSEGANCC-----NFVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLE------ 282

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPA----- 350
             + A V+R  +L  HYR P++++   L +A    + L         +   ID +     
Sbjct: 283 -QFDAEVVRFFILRAHYRSPLNYSDAHLDDARRSLDSLYFALRDVPPAAADIDWSNEFAG 341

Query: 351 -VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI--EVCKEHLNKNI 405
              +AL  D ++  AI  L +LA E    K+  L  +      ++G+       +L    
Sbjct: 342 RFAAALNEDFDSHGAIAVLFELAAEVNRQKSAGLSCLLKGLGGVIGLLEREPSAYLQGGA 401

Query: 406 SI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +      A+ +++ +R    K K F+ AD IR +L++ G IL+D
Sbjct: 402 GVGGLDEAAVGQMIVDRAAAKKAKNFAEADRIRDELKAAGIILDD 446


>gi|312171645|emb|CBX79903.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 507

 Score =  315 bits (807), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 193/483 (39%), Positives = 261/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 47  LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 105

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T +   +  KD   L  L P  +PR
Sbjct: 106 -LNYVRNITDIDDKIIKRAHEN------GESIEQLTQRMIGEMHKDFAALNILPPDLEPR 158

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I   HAY A+N +++F   S   YGS SR+ +D+ + G RV    
Sbjct: 159 ATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTA 218

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 219 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 278

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A       N W+H+G + ++  KMSKS  NF T+ ++LE        +
Sbjct: 279 PHHENEIAQSTSA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE-------HY 330

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGI--IDPAVLS 353
            A  +R  ++  HYR  +++    L +A        I L      +T  G    +    +
Sbjct: 331 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARFRA 390

Query: 354 ALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNASAHILG-----IEVCKE----- 399
           A+ +D NT  A  AL  LARE      +N   +    A   +LG     +E   E     
Sbjct: 391 AMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQS 450

Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
             ++N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   TRW
Sbjct: 451 GANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTRW 504

Query: 458 KQK 460
           ++K
Sbjct: 505 RRK 507


>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|187631632|sp|A1S4X2|SYC_SHEAM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 459

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 262/482 (54%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKII+RA +        ++   +T +   +   D   L  + P+ +PR
Sbjct: 61  -VNYQRNITDVDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMVRPSFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I ++  ++  GHAY  A+ +++FD SS   YG  S + +++ + G RV    
Sbjct: 114 ATLHIDEIIDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 NKRNPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  +L  HYR  ++++   L +A   L +    +  KG+   ++ A         +
Sbjct: 286 AQTVRYFLLSGHYRSQLNYSEDNLKQARASLER--MYTALKGLDLTVEAAGADEFVSRFM 343

Query: 353 SALYNDLNTVSAIQALHKLARE--STKNHDLLP------IFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  + RE    K  D+             A +LGI         +
Sbjct: 344 AAMDDDFNTPEAYSVLFDMVREINRLKTSDMAAASQLGVALKELAEVLGILSSTPEAFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+ ER      K + +AD  R +L + G +LED      G   T W+
Sbjct: 404 GEGNADEVAEIEALIVERNRARAEKDWPAADVARDRLNALGVVLED------GPEGTTWR 457

Query: 459 QK 460
           +K
Sbjct: 458 KK 459


>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 460

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 180/481 (37%), Positives = 263/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  +    + MYVCG T+YD  HIG+ R  + FD + R LR+   + 
Sbjct: 2   LKIYNTLSKQKEEFTPLVAGKVSMYVCGVTIYDNCHIGHGRTFVAFDSVVRYLRFKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + ++RNITD+DDKII+RA +       N++   +T++ T+   +D   L  L P  +PR
Sbjct: 61  -LNFIRNITDVDDKIIKRANEN------NESCDALTARFTKAMHRDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+P +I +I+ +I   HAY A+N +++F  SS   YG  S + +D  + G RV  + 
Sbjct: 114 VTEHMPDVIAMIKTLIEKQHAYVASNGDVLFSVSSFDGYGKLSGQNLDMLQAGARVDVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK S   EP WESPWG GRPGWHIECSAMS  +LG +FDIHGGG DL FP
Sbjct: 174 SKHDPLDFVLWKMSKENEPSWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      AN W+H+G + ++  KMSKS  NF TI ++LE       ++ 
Sbjct: 234 HHENEIAQSCCA-HDATYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLE-------AYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------AVLS 353
           A  +R  ++  HYR  ++++   L +A   L +         I D           A   
Sbjct: 286 AESVRYFLISGHYRSQLNYSEDNLKQARASLERLYTALRDVDISDAPIAKDNSHYQAFCK 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGI--EVCKEHLNK 403
           A+ +D NT  A+  L +LA+   K          +L  +     ++LG+  +   + L  
Sbjct: 346 AMDDDFNTPEALAVLFELAKALNKAKLSADKSAPELALLLRTLGNVLGLLDQSADDFLQG 405

Query: 404 NISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + S A    IE L+++R      K ++SAD  R QL +   +LED      G   T W++
Sbjct: 406 DESSAEVEKIELLIKQRNDARANKDWASADDARAQLSALNIVLED------GANGTTWRK 459

Query: 460 K 460
           +
Sbjct: 460 Q 460


>gi|327393038|dbj|BAK10460.1| cysteinyl-tRNA synthetase CysS [Pantoea ananatis AJ13355]
          Length = 461

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        ++I  +T++   +   D   L  L P  +PR
Sbjct: 61  -VNYVRNITDIDDKIIKRANEN------GESIETLTNRMIAEMHSDFDALGILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ L++ +I  GHAY A N +++FD  S  +YG+ SR+ +D+ + G RV    
Sbjct: 114 ATRHIPEIVELVEKLIARGHAYVAENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPSWPSPWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L+        + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKG--IIDPAVLSA 354
           A  +R  ++  HYR  +++    L +A   L +         + + + G    +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDRNAVAHGGEAFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EV---CK 398
           + +D NT  A   L  +ARE         T  + L       A++LGI     EV     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDMTAANALAAKLREIANVLGILQQEPEVFLQSS 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N      IE+ V+ R      K ++ AD  R +L + G I+ED      G + + W+
Sbjct: 406 AQGNDEEVAEIERWVKARADARAAKDWAQADVARDKLNALGVIVED------GPQGSSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
 gi|166200146|sp|A5EWG6|SYC_DICNV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
          Length = 456

 Score =  315 bits (807), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/461 (39%), Positives = 257/461 (55%), Gaps = 39/461 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R+   F  I P+++ MYVCG TVYDF HIG+AR M+VFD + R LR    + 
Sbjct: 4   LHLYNSLSRQKEPFHPITPNHVMMYVCGMTVYDFCHIGHARVMVVFDTIARHLRASGYQ- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +       N+ I  +T +      +D   L CL P+ +P+
Sbjct: 63  -LTYVRNITDIDDKIIRRAAEN------NEPIQALTQRFINAMHEDEAALGCLPPSIEPK 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +MI +I  +I   HAY A+N ++ +   S   YG  + R++++ + G R+    
Sbjct: 116 ATEYVAEMIAMIGELIAQNHAYIADNGDVYYSVRSFDEYGKLANRRLEDLRAGERIAINE 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP WESPWG GRPGWHIECS MS H LG  FDIHGGG+DL FP
Sbjct: 176 AKNDPLDFVLWKKAKTGEPSWESPWGAGRPGWHIECSVMSRHQLGDHFDIHGGGMDLKFP 235

Query: 244 HHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HHE EIAQS   C     K  N W+HNGF+N++  KMSKS GNF T+ ++L       ++
Sbjct: 236 HHECEIAQSEPVCGG---KHVNYWLHNGFINIDNEKMSKSLGNFFTVRDVL-------KN 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGII----DPAVLS 353
           +   VIR  ML +HYR P++++   L EA    + L +      T+ G I        ++
Sbjct: 286 YAGEVIRFFMLQSHYRGPVNYSDAALEEAKRGLQRLYTALETAPTTGGAILLPYQERFVA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL--------LPIFNASAHILGIEVCKEHLNKNI 405
           A+ +D NT  AI  L +LA+   K            L    A   +L  +       K  
Sbjct: 346 AMDDDFNTPQAIAVLFELAKMLNKAAAAEAADIAFTLRTLAARLGLLTGDAKTLFQQKGA 405

Query: 406 SIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             A  IE  +  R      K +++AD IR++L + G  L+D
Sbjct: 406 LSAAEIEAEIARRQAAKAAKDYATADSIREKLSALGIELKD 446


>gi|317495866|ref|ZP_07954229.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914043|gb|EFV35526.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
          Length = 465

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 186/488 (38%), Positives = 268/488 (54%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E  S       S +T K    F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEEGIST------SELTDKYIAAFFKDYDALGCKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I  +I  G AYE+N ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIIDFIAKLIEEGFAYESNGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W SP+G GRPGWHIECS M+   LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWASPFGEGRPGWHIECSVMAKETLGDTIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     +N W+HN F+N++  KMSKS GNF  + +++        S   
Sbjct: 234 HENEIAQSECHNHA-PFSNYWMHNAFINIDNVKMSKSLGNFRLVKDII--------SEID 284

Query: 305 P-VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVL 352
           P V+RL ML  HYR PI++T++ +  A+    K   +            T + + D  V 
Sbjct: 285 PMVLRLFMLTVHYRTPINYTLENIELAKTNFEKLKTSYQNLEFRLNNEMTVEKLDDEVVA 344

Query: 353 SA----------LYNDLNTVSAIQALHKLAR-------ESTKNHDLLPI----FNASAHI 391
            A          + +D NT +A+ + +++ R       ++  N + L +    F+  + I
Sbjct: 345 LASSELEKFEEYMQDDFNTANALSSWYEVVRITNSYTAQNEVNKETLELLKAAFDTYSSI 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI V  +  N      IEKL++ER    K + F+ AD IR  L+ +G ILED K     
Sbjct: 405 LGINVKDD--NSLEDSHIEKLIEERENARKNRDFALADKIRDDLKEQGIILEDTK----- 457

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 458 -QGVRWKK 464


>gi|330686235|gb|EGG97847.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 466

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 260/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLIKRSKE------LNESVPEIADKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T    +YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKKLVDEGYAYESNGDVYFRTRQFKDYGKLSHQSIDDLKVGARIEAGDQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTV-----------------QRLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ +                 Q + E E + +           I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVSAAKSGLERIRNSYQLIEEREAIATDIDNQEEYINQI 345

Query: 348 DPAVL---SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLP----IFNASAHILG 393
           D  +    + + +D NT +A+ A + LA+       E+  +  ++     ++   + +LG
Sbjct: 346 DQILENFEAVMDDDFNTANAVTAWYDLAKLANRYVLENVTSSKVIAQFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +     +  +   IE+L++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLKGNQQDDLLDEEIEQLIEERNEARKNKDFARADEIRDHLKEQNIILED 456


>gi|325272290|ref|ZP_08138699.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324102572|gb|EGC00010.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 460

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 180/467 (38%), Positives = 255/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLTKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLS-AL 355
             V+R  ++ +HYR  I+++   L +A+  L ++       P+ +   G       S A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  D        L         +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDVDAAAGLAGRLRELGDVLGVLQLDADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR QL + G +LED K 
Sbjct: 406 EGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452


>gi|332800102|ref|YP_004461601.1| cysteinyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697837|gb|AEE92294.1| cysteinyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 466

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 181/470 (38%), Positives = 260/470 (55%), Gaps = 48/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL RK  EF  ++ ++++MY CGPTVYDF HIGNAR  I FD++   L++   +  V
Sbjct: 3   IYNTLTRKKEEFVPLEDNHVKMYTCGPTVYDFFHIGNARVFITFDMVRNYLKFRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+V+N TDIDDK+I+RA  E  ++        +  +   ++  D   L        PRAT
Sbjct: 61  TFVQNFTDIDDKMIKRANDEGITV------KELGERFIGEYFHDADTLGITRADVHPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HI ++I LI+ ++  G+AYE N ++ + TS   +YG  S + IDE K G R+     KK
Sbjct: 115 EHIDEIIDLIKILVEKGYAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEPGEQKK 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF LWK   P EP W+SPWG+GRPGWHIECS M+  YLG+  DIHGGG DLIFPHHE
Sbjct: 175 DPIDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLIFPHHE 234

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS  A   +  A  ++H G+LN+  +KMSKS GNF T+ ++L+T       +   V
Sbjct: 235 NEIAQSEAATG-KPFARFFMHVGYLNINNQKMSKSLGNFFTVRDILKT-------YDPEV 286

Query: 307 IRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP------- 349
           +R  ML +HYR PI+F          +++RL  A   +      +  K + +        
Sbjct: 287 LRFFMLSSHYRNPINFSQDLMEQAKNSLERLHNAIYSMEHLESVAQDKDLAEDDEKYLNK 346

Query: 350 ------AVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASAHILG----IE 395
                   + A+ +D NT  AI +L  + RE      +N     I +    IL     + 
Sbjct: 347 LETNKNEFIKAMDDDFNTADAIASLFNIVREYNMFVDENSPKKLIVDTKDAILTLGSVLG 406

Query: 396 VCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + ++ + K  +   IE+ + ER    K K ++ AD IR  L+++G ILED
Sbjct: 407 LFRKFMEKTLLDEEIEQKIIEREQARKEKNYALADKIRDDLKAQGIILED 456


>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 467

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 179/489 (36%), Positives = 258/489 (52%), Gaps = 58/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN L R    F  +    +  Y CGPTVYD+ HIGNARP IVFDVL R L Y   + 
Sbjct: 3   LSLYNDLTRNKELFVPLADGKVSFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEYKGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I+RA ++  ++      + +  K    + +D   L     ++ PR
Sbjct: 62  -VTFVQNFTDIDDKMIDRANRDGITV------AQLAEKTIADYYEDADALGIKRASYNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++PQ+I L+Q +I  GHAY     + FD  S P YG  S++ +DE   G R+     
Sbjct: 115 ATEYMPQIIQLVQKLIDRGHAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARIEVDDA 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK   P EP W+SPWG+GRPGWHIECS MS+  LG   DIH GG+DL FPH
Sbjct: 175 KKCPLDFVLWKPQKPGEPAWDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +   N W+HN ++ ++  KMSKS GNF+T  E         R   +
Sbjct: 235 HENEIAQAEAATG-KPFVNFWLHNEYILIDKEKMSKSLGNFLTARE--------ARKHYS 285

Query: 305 PV-IRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKG----IIDPAVLS-- 353
           P+ IR  ML  HYR P++F+ + L +A  ++ +    W     +K       D A LS  
Sbjct: 286 PLAIRAFMLSAHYRSPVNFSPEGLEQAGAMVERLRNCWSDLQFAKSRRDLSYDDASLSEA 345

Query: 354 ----------ALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHI 391
                     A+ +D NT  A+ A+ ++ +    +             D    F     +
Sbjct: 346 VRQGREDFEEAMDDDFNTAGALGAVFEVVKAVNTHLKSSGALSGKGLDDAEKFFRDIEEV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +G+       + +    I+ LV++R    K K F+ +D +R +L ++G +LED   P   
Sbjct: 406 MGLLGLSHETDGDAE--IDALVEQRNAARKAKNFAESDRLRDELAARGIVLED--TPQG- 460

Query: 452 QRMTRWKQK 460
              T+WK+K
Sbjct: 461 ---TKWKRK 466


>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 460

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 264/482 (54%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDAIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N++   +T++   +   D   L  L P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRA------IENNESCDDLTTRMLAEMHNDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY  AN +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIEITETLIERGHAYVAANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKQGEPSWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLGY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKWPQTSTSKGIIDPAVLS 353
           A  +R  +L  HYR  +++T + L +A   L           K  Q +   G  +     
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTSLRGTDKSAQPAGGAG-FEARFTE 344

Query: 354 ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILG-IEVCKEHLNKN 404
           A+ +D NT  A   L  +ARE    K  D++     +A       ILG +E   EH  + 
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKAEDIVAANGLAAELRKLAGILGLLEQEPEHFLQG 404

Query: 405 IS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +        IE L+++R    K K+++ AD  R QL   G  LED      G + T W+
Sbjct: 405 GAQVDDDVAQIEALIKQRNDARKNKEWALADAARNQLNELGIELED------GPQGTTWR 458

Query: 459 QK 460
           +K
Sbjct: 459 RK 460


>gi|220910551|ref|YP_002485862.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254781541|sp|B8HQA4|SYC_CYAP4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219867162|gb|ACL47501.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 494

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 190/500 (38%), Positives = 275/500 (55%), Gaps = 73/500 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R    F+ ++P +++MY CG TVYD+ H+G+AR  IV+DV+ R L++   + 
Sbjct: 3   LSLYNTLTRHQEPFEPLEPGHVKMYCCGVTVYDYCHLGHARSYIVWDVVRRYLQWSGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RARQE      N  +  ++ +  Q + +D  RL  L     P+
Sbjct: 62  -VRYVQNFTDIDDKILNRARQE------NSTMQAVSDRFIQAYHEDMQRLNILLADVYPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT+ IP++I LIQ ++  G+AY  + ++ +     P+YG  S R++++ + G   RV + 
Sbjct: 115 ATDVIPEIIQLIQTLVDQGYAYAVDGDVYYAVDRFPDYGKLSGRQLEQMQAGASGRVDDT 174

Query: 183 YHKK-NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             KK +P DF LWK +   E      W+SPWG+GRPGWHIECSAM    LG   DIH GG
Sbjct: 175 EPKKRHPLDFALWKAAKSEELSVYQPWDSPWGKGRPGWHIECSAMVRKELGHTIDIHCGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DLIFPHHENEIAQS  A R +  A+ W+HNGF+N++G KMSKS GNF TI   L +   
Sbjct: 235 MDLIFPHHENEIAQSEAATRAD-LAHYWLHNGFVNIQGEKMSKSLGNFKTIRAFLNSGV- 292

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQTS 341
                   ++RL +L  HYR+PIDF+ + +T A+                    +W    
Sbjct: 293 -----DPMMLRLFVLQAHYRKPIDFSDETITAAQHSWQTLQEGLRFGYDYGQQLRWEDYQ 347

Query: 342 TSKGIIDPAVL-------------SALYNDLNTVSAIQALHKLARESTKNHDLL-----P 383
            S    DPA +             +A+ +DLNT SAI  L +LA+E  +  +L+     P
Sbjct: 348 DSS-FGDPACMRIPDSGAEIERFRAAMDDDLNTASAIAVLFELAKELRREGNLISHAGQP 406

Query: 384 IFNAS------------AHILGIEVCKE---HLNKNISIA-IEKLVQERLILLKMKKFSS 427
             +              A +LG+EV  E     +  +S A IE L+Q+R    K K ++ 
Sbjct: 407 QLDPQELRSIWQTLVCLAQVLGLEVSPETEVTADDGLSEAEIEDLIQQRQAARKAKNYAE 466

Query: 428 ADYIRKQLESKGFILEDYKN 447
            D IR +L++KG  L D K+
Sbjct: 467 GDRIRNELKTKGITLIDQKD 486


>gi|255282796|ref|ZP_05347351.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266570|gb|EET59775.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 469

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 189/478 (39%), Positives = 257/478 (53%), Gaps = 57/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K  EF  + P  + MYVCGPTVY+F HIGNARPMIVFD + R + +   E 
Sbjct: 1   MKIYNTLSKKKEEFVPLVPGKVSMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEHKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A++E  +         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAQEEGVTA------DEISQRYIAECKKDMEGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +I  +I  G+AY  A+  + F T     YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIDGMIEMISTLIEKGYAYPAADGTVYFRTRKFKEYGKLSHKNLDDLRGGNRSLLVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW +GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEQKEDPLDFVLWKPKKEGEPYWESPWCQGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           IFPHHENEIAQS CC  +I   A  W+HNGFLN++ RKMSKS GNF T+ E+ E      
Sbjct: 233 IFPHHENEIAQSECCNGKI--FARYWMHNGFLNIDNRKMSKSLGNFFTVREISE------ 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------------WP 338
             +   V+R  ML  HYR P++F+ + +  A   L++                      P
Sbjct: 285 -KYDLQVLRFFMLSAHYRSPLNFSAELMEAAGNGLNRIVNAVENLKFLAGNASQETLTEP 343

Query: 339 QTSTSKGII--DPAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLPIFNAS------ 388
           +  T K +   +     A+ +D NT  AI A+ +L + +  N   D       +      
Sbjct: 344 EAETQKALAEYEKKFDDAMDDDFNTADAISAIFELVKFANTNVTEDSSKALAEAVKDKIV 403

Query: 389 --AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + ILG+ V K+   + +   IE L++ER    K K F+ AD IR  L  KG IL+D
Sbjct: 404 ELSDILGLIVEKKE--EMLDAEIEALIEERQAARKAKNFARADEIRDILLGKGIILKD 459


>gi|107101226|ref|ZP_01365144.1| hypothetical protein PaerPA_01002258 [Pseudomonas aeruginosa PACS2]
          Length = 460

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 262/483 (54%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQILIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------VLS 353
             V+R  ++ +HYR PI+++ + L EA+  L ++   +  KG+ + A            +
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRF--YNALKGLPEAAPAEAAEYVERFAA 343

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNASAHILGIE 395
           A+ +D NT  A   L +LARE  +  +                  LL +         ++
Sbjct: 344 AMDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAF-LQ 402

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              E   K  +  +E L+Q RL     K ++ +D IR +L + G +LED      G+  T
Sbjct: 403 AGAE--GKVDAAEVEALIQARLEARAAKNWAESDRIRDRLTAMGVVLED------GKGGT 454

Query: 456 RWK 458
            W+
Sbjct: 455 TWR 457


>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225307|sp|A1RL92|SYC_SHESW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 461

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 262/483 (54%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 4   LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 63  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDFEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A++ +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 116 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 176 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 236 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++   L +A   L +     T+   +D  V            
Sbjct: 288 AETVRYFLLSGHYRSQLNYSEDNLKQARSALER---LYTAIKDVDLTVAAAPAEEFIVKF 344

Query: 353 -SALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHILGI------EVC 397
            +A+ +D NT  A   L  + R        +  K   L       A +LG+         
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFF 404

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K   + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARSEKDWPAADVARNRLNELGVVLED------GPSGTTW 458

Query: 458 KQK 460
           ++K
Sbjct: 459 RKK 461


>gi|160937871|ref|ZP_02085229.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439097|gb|EDP16851.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
           BAA-613]
          Length = 469

 Score =  315 bits (806), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 186/479 (38%), Positives = 258/479 (53%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL RK  EF  + P  ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRKKEEFVPLTPGEVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E       DA   ++ +  ++  KD   +     T  P+
Sbjct: 60  -VRYVSNFTDVDDKIIKKAIEEGV-----DA-DTVSRRYIEECKKDMAAMNVKPATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +IQ +I   HAY A +  + F T S   YG  S + +DE + G R   V 
Sbjct: 113 ATQEICGMLEMIQTLIDKNHAYVAGDGTVYFRTGSFKEYGKLSHKNLDELQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEGKEDPNDFVLWKPKKEGEPFWESPWCDGRPGWHIECSVMSKRYLGEQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSECAND-KNFATYWMHNAFLNIDNKKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTS 343
            +   V+R  ML  HYR P++F+                 V++L + E   S   +T+  
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTCVEKLRDLEAKASDSSKTAGE 344

Query: 344 KGIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
           +  ++ A         A+ +D NT  AI A+ +L + +    D          +  +   
Sbjct: 345 QATMEEADKLRGKYEEAMDDDFNTADAISAIFELVKLANTTADESGTREFVSYMKTMIEE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              +LGI    E   + +   IE++++ R    K K F+ AD IR +L   G +LED +
Sbjct: 405 LCDVLGI--ITEKKEEVLDSEIEEMIEARQQARKDKNFALADEIRGKLLDMGIVLEDTR 461


>gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 508

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/500 (37%), Positives = 262/500 (52%), Gaps = 66/500 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+++      F+ +    + MYVCG TVYD+ HIG+AR M+ FDV+ R LR+   + 
Sbjct: 25  LKIYDSMTTNKRSFEPLQVGKVGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGFD- 83

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        + I  +T +      +D   L C +P  +PR
Sbjct: 84  -VNYVRNITDIDDKIIARANEN------GEEIGQLTERFITAMHEDAAALGCESPDAEPR 136

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M+ +I  +    HAY A+N ++ +   +   YG  S+RK+++ + G+RV    
Sbjct: 137 ATQHIDDMLQMIGTLEQKEHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDT 196

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK +   EP W+S WG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 197 DKKNPFDFVLWKAAKAGEPQWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFP 256

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A      AN W+H GF+N++G KMSKS GNF TI E++E        + 
Sbjct: 257 HHENEIAQSEAATGC-TYANNWMHVGFINVDGEKMSKSLGNFFTIREVME-------KFH 308

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------WPQTSTSKGIIDPA 350
              IR  +L +HYR  ++F+   L EA   L++              P  + S+  ID A
Sbjct: 309 PETIRFFILSSHYRSQVNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEATIDTA 368

Query: 351 ------------VLSALYNDLNTVSAIQAL-------HKLARESTKNHDLLPIFNASAHI 391
                        + A+ +D NT  AI  L       +KLARE+  +     +  A+  +
Sbjct: 369 SIDSEIRGYSANFIKAMNDDFNTPQAISVLFSLAKEVNKLARETENDQATAKLKAAAVTL 428

Query: 392 LGI------------EVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
            G+            E  + H+      +     I+ L+QER+     K F+ AD IR  
Sbjct: 429 KGLAGTLNIGQVKPTEFLQAHIGSVDEEQMTDEQIDTLIQERIDAKANKNFARADEIRNL 488

Query: 435 LESKGFILEDYKNPDNGQRM 454
           L+     LED K     +R+
Sbjct: 489 LQQNNIELEDSKQGTTWRRI 508


>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 485

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 191/494 (38%), Positives = 267/494 (54%), Gaps = 73/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN++ R+  EF       I +YVCG T YD+ HIG+AR  +VFDVL   +RY+  + 
Sbjct: 1   MQLYNSMTRQKEEFIPQTSGEISLYVCGITAYDYCHIGHARAAVVFDVL---VRYFRDQN 57

Query: 65  -CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN TD+DDKII+RA +EH           +  K    + +D  RL       +P
Sbjct: 58  FAVHFVRNFTDVDDKIIKRAAEEHLEA------DEVAQKYIAAYYEDMERLGVQPANFEP 111

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT HI  MI L +N+I  GHAY  A+ ++ F   S+P+YGS S R++D  + G R+   
Sbjct: 112 KATEHIQDMIGLAENLIAKGHAYATASGDVYFRVRSLPSYGSLSGRELDTMRAGARIAPG 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWKR+ P EP W SPWG GRPGWH+ECSAMS  +LG   DIHGGG DL F
Sbjct: 172 EEKEDPLDFALWKRAKPEEPSWPSPWGNGRPGWHLECSAMSERFLGLPLDIHGGGQDLAF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS  A   E  A  W+HNGF+ +E  KMSKS GNFITI ++L        S+
Sbjct: 232 PHHENERAQSLAASGKE-LARFWVHNGFVQVEAEKMSKSLGNFITIRDIL--------SY 282

Query: 303 PAP-VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPA 350
             P V+R  ++  HYR P+DF  + + EAE  L +  QT             SK  + P+
Sbjct: 283 YLPEVLRYFLVTKHYRSPLDFNWEVMDEAEKGLRRLYQTRQHIAEALSRSNWSKTEL-PS 341

Query: 351 VLSA------------LYNDLNTVSAIQ---ALHKLA---------RESTKNHDLL---- 382
            LSA            + +DLNT  A+     L++LA         R++     LL    
Sbjct: 342 ELSAEIDDLDAKWRQNMEDDLNTAGALGHVFTLNRLANRILEDKTWRKAEAGGKLLERIQ 401

Query: 383 PIFNASAHILGI---------EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADY 430
            IF    ++LG+         +  +    K   I   A+ +L+ +R    + K F++AD 
Sbjct: 402 SIFEHIGNVLGLFQQTPDAFLDDLRTQKAKRKGIDTSAVAQLITKRQEARRAKDFTTADS 461

Query: 431 IRKQLESKGFILED 444
           +R+QLE  G  ++D
Sbjct: 462 VRQQLEEMGIEVQD 475


>gi|148285058|ref|YP_001249148.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225303|sp|A5CFB8|SYC_ORITB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146740497|emb|CAM81053.1| cysteinyl-tRNA synthetase, class Ia [Orientia tsutsugamushi str.
           Boryong]
          Length = 478

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/489 (38%), Positives = 273/489 (55%), Gaps = 55/489 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL RK   F  ++  +++MYVCGPTVYD  HIGNAR ++V+D+LYR+L + Y  + +
Sbjct: 5   IYNTLSRKKERFVPLNCKSVKMYVCGPTVYDIPHIGNARSVVVYDLLYRVLSFLYDRQNI 64

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA++    + IN  I  +T + T +F +D + L C  PT +P+AT
Sbjct: 65  TYVRNITDIDDKIINRAKE----LKIN--IFKLTHETTIKFHEDMSYLGCWNPTIEPKAT 118

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           ++I  MI +I ++I  G+AY  ++  + F   +  +Y   SRR  D   + +    +  K
Sbjct: 119 DNIDVMINIITSLIQTGNAYSTDDGHVYFAVKTFQDYNLLSRRTFDSMMLNSSESSEQQK 178

Query: 186 KNPADFILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              ADF+LWK +      ++  ++SPWG+GRPGWHIECSAMS  +LG+ FDIHGGG DLI
Sbjct: 179 SYFADFVLWKPANADNEDIDAVFDSPWGKGRPGWHIECSAMSYKFLGENFDIHGGGADLI 238

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS CA    + A+ W+HNGFL ++G KMSKS  NF+T+ +L +    G   
Sbjct: 239 FPHHTNEIAQSRCAFPKSRHASYWVHNGFLTVKGEKMSKSLNNFVTVRDLQKQNINGA-- 296

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
                +RL  L THYR+P+DF  + L +A+ +++    T  S  +               
Sbjct: 297 ----AVRLMFLSTHYRKPLDFNDKSLNDAKNIINYLYDTIDSVNVTVQQQDNTKAEFKGN 352

Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIFNASA 389
                 ++AL +DLN+  AI  L  +A++  + +                +LL I +   
Sbjct: 353 AFTVEFINALLDDLNSPKAIVCLLNIAKQIRRQNQSEYKLALTQALLYASNLLGILHNYQ 412

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            I      K++ N  I   I+ L+ +R+   + K ++ AD IR QL S G  L      D
Sbjct: 413 FIKDSNDVKDNSNV-IPHEIDLLIAKRIQAKQDKDWNLADQIRSQLLSNGISL-----TD 466

Query: 450 NGQRMTRWK 458
                T WK
Sbjct: 467 KADGTTSWK 475


>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 473

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 192/475 (40%), Positives = 268/475 (56%), Gaps = 51/475 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF       I MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII RA +        ++I  +T++  +   +D   L C AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIARANEN------GESIQQLTARFIEAMNEDAANLGCAAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGI--IDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  LS+       + QT   K +  +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQTYGQKTVDALDQSFVER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE---------STKNHDLLPIFNASAHILGI--EVCKE 399
             +A+ +D NT  A+  L +L +E         + +   L        +ILG+      E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHDVDE 409

Query: 400 HLNKNIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            L  +I           IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLDQGVVLEDTR 464


>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 452

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 183/468 (39%), Positives = 259/468 (55%), Gaps = 45/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++   F  IDP+ + MYVCG TVYD+ H+G+AR +++FDV+ R LR ++   
Sbjct: 2   LKIYNTLSKQKEVFHPIDPNKVGMYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHF--P 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA      +   + I  +T++      +D   L  L P  +PR
Sbjct: 60  NVEYVRNITDIDDKIIKRA------VENKEDIYSLTNRFIDAMHEDERALGVLPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ + QM Y+I+ +I  G AY+A N ++ +       YG  S + +DE + G RV  + 
Sbjct: 114 ATDAMDQMFYMIEALIEKGIAYQAKNGDVYYSVRDFEGYGKLSGKNLDELEAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP W SPWG GRPGWHIECSAMS+H+LG  FDIHGGG+DL FP
Sbjct: 174 DKKDPLDFVLWKMAKPSEPSWSSPWGDGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H GF+N+   KMSKS  NF TI  +LE       S+ 
Sbjct: 234 HHENEIAQSEGANGC-TFVNTWMHVGFVNINDEKMSKSLNNFFTIRVVLE-------SYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVL------- 352
              +R  ++ +HYR P++F+   L  A+  L++        S S   +D           
Sbjct: 286 GETLRYFIMSSHYRSPLNFSDDNLNLAKTSLTRLYTAMRGLSASDAAMDEVSQRFDFESR 345

Query: 353 --SALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKE 399
             +AL +D NT  A+  L +LA+      D           LL        IL  +    
Sbjct: 346 FNAALDDDFNTPIALSILFELAKAVNLQRDQDIDQANALSQLLQKLGGYIGILQTD-ADS 404

Query: 400 HLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILED 444
            L + + +A E +   +++R      K F+ +D+IR +L   G  L+D
Sbjct: 405 FLKRGVDLADEDIDAKIKQRDEAKAYKDFALSDHIRGELPKLGLELKD 452


>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|187629787|sp|A8MLB7|SYC_ALKOO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 464

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 181/471 (38%), Positives = 256/471 (54%), Gaps = 48/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF  ++   +RMY CGPTVY++ HIGNAR  +VFD L R L Y   + 
Sbjct: 1   MKLYNTLTRKKEEFIPLEEGKVRMYACGPTVYNYFHIGNARTFMVFDALRRYLIYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII RA +E        A   I+ +  +++  D   L        P+
Sbjct: 60  -VTFVQNFTDVDDKIIRRANEEGV------APEEISERFIKEYFYDAGTLGIEKADIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  +  ++  GHAYE+N ++ FD S    YG  S++ +++ + G R+    +
Sbjct: 113 VTENMAEIIAFVAKLVEKGHAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEINEY 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK +   EP WESPWG GRPGWHIECSAM+  YLG+  DIHGGG DL+FPH
Sbjct: 173 KKNPLDFALWKSAKAGEPSWESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLVFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  C+ +  K AN W+H G+LN++ +KMSKS  NF T  E+ E        + 
Sbjct: 233 HENEIAQSEACSGK--KFANYWLHVGYLNVDNKKMSKSLNNFFTPREISE-------EFD 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSKWPQTSTSK----- 344
              +R  ML  HYR PI+F+   L  A              E LL    +   S+     
Sbjct: 284 LENLRFFMLSAHYRNPINFSRDLLEAAKNGLDRLYTGKNNLEYLLENAAEREVSEEEKNF 343

Query: 345 --GI--IDPAVLSALYNDLNTVSAIQALHKLARE-----STKNHD--LLPIFNASAHILG 393
             G+       + A+ +D NT   I  +  L RE     S KN    +   ++    + G
Sbjct: 344 IHGLQSFKNQFIDAVDDDFNTADGIAVIFDLVREINSHISEKNSKKAVEASYDLLMELTG 403

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +    +   +++   IE+L+ ER    K K F+ +D IR  L+ KG +LED
Sbjct: 404 VLGLLKREAEDLEEEIERLIAERQQARKDKNFALSDKIRDDLKEKGIVLED 454


>gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 459

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 263/483 (54%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A++ +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++   L +A   L +     T+   +D  V            
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALER---LYTAIKDVDLTVAAAPAEEFIAKF 342

Query: 353 -SALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHILGI------EVC 397
            +A+ +D NT  A   L  + R        +  K   L       A +LG+         
Sbjct: 343 KAAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFF 402

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K   + +    IE L+ ER      K + +AD  R +L+  G +LED      G   T W
Sbjct: 403 KGEGSDDEVAEIEALIVERNRARSEKDWVAADVARNRLDILGVVLED------GPSGTTW 456

Query: 458 KQK 460
           ++K
Sbjct: 457 RKK 459


>gi|313499077|gb|ADR60443.1| CysS [Pseudomonas putida BIRD-1]
          Length = 460

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 180/467 (38%), Positives = 255/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLS-AL 355
             V+R  ++ +HYR  I+++   L +A+  L ++       P+ +   G       S A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  D        L         +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR QL + G +LED K 
Sbjct: 406 EGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452


>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
 gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
          Length = 461

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 180/469 (38%), Positives = 260/469 (55%), Gaps = 45/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL ++ + F  I+   I+MYVCG TVYD  HIG+AR M+ FDV+ R +R    + 
Sbjct: 2   LQIYNTLTKEKSPFTPIEEGKIKMYVCGVTVYDLCHIGHARVMVAFDVITRFMRSQGWD- 60

Query: 65  CVTYVRNITDIDDKIIERARQ--EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V YVRNITD+DDKII+RA +  E P          +T +      +D  RL+ L PT +
Sbjct: 61  -VDYVRNITDVDDKIIKRAAENGEEPHE--------LTERMIAAMHEDEARLSVLRPTQE 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI  +I L++ +I  G AY  AN ++ +      +YG  + + +DE K G R+  
Sbjct: 112 PRATAHIGDIISLVETLIEKGFAYPAANGDVYYRVEKFADYGKLTNKNVDELKTGARIEV 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK +   E  W+SPWG+GRPGWHIECSAMS   LG  FDIHGGG DL 
Sbjct: 172 EEAKESPLDFVLWKSAKEGEVSWDSPWGKGRPGWHIECSAMSKCCLGNTFDIHGGGPDLP 231

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+      N W+H G + +   KMSKS GNF TI ++LE        
Sbjct: 232 FPHHENEIAQSEAANGC-TYVNTWMHAGPVRVNSEKMSKSLGNFFTIRDVLE-------K 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------LS 353
           + A V+R  +   HYR  ID++   L EA ++L ++ Q       ++  +        ++
Sbjct: 284 YNAEVVRFFLARVHYRTYIDYSEDSLKEARVMLERFYQALRGVDAVEGPLENDFEERFIA 343

Query: 354 ALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASAHILG--IEVCKEHLNKNI-- 405
           A+ +D NT  A+  + +L  E  K         P   A    LG  + + +++ ++ +  
Sbjct: 344 AMNDDFNTPKAVSVMFELVNELNKATREGASEAPALAAQLRKLGGMLGLLQQNADEFLQG 403

Query: 406 --------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                   +  IE+L+ +R    K K F+ AD IR  L S+G IL+D +
Sbjct: 404 ESEEGGLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLASQGIILKDSR 452


>gi|157690877|ref|YP_001485339.1| cysteinyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|187629792|sp|A8F962|SYC_BACP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157679635|gb|ABV60779.1| cysteine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 466

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 174/487 (35%), Positives = 261/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL RK  EF  ++P  ++MYVCGPTVY++ HIGNARP IV+D + + L Y     
Sbjct: 3   INIYNTLTRKKEEFVPLEPGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRKYLEY--SGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +    +P       I  +  Q + +D + L C      PR
Sbjct: 61  DVNFVSNFTDVDDKLIKAANELGEDVPT------IADRFIQAYFEDVSALGCKKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I+ +I  G+AYEA+ ++ + T S   YG  S + IDE K G R+     
Sbjct: 115 VTENMDDIIAFIETLIEKGYAYEADGDVYYSTRSFEGYGKLSHQSIDELKTGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KRDALDFALWKAAKNQEISWDSPWGEGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+E  KMSKS GNF+ ++++++ +         
Sbjct: 235 HENEIAQSEALTG-KPFAKYWMHNGYINIENEKMSKSLGNFVLVHDIVKEQ-------DP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID-------- 348
            V+R  ML  HYR PI++++  L   +   ++   +         +S  I +        
Sbjct: 287 DVLRFFMLSVHYRHPINYSMDLLESTKSAFNRLKTSYANLHHRLESSTNITEDNAKWLAK 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAREST----KNHD-------LLPIFNASAHIL 392
                   +S + +D NT +AI  L +LA+++      +H         + +F     +L
Sbjct: 347 VEEQRATFISEMNDDFNTANAISVLFELAKQANYYMENDHTSEEVIKAFIGLFQEITSVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G  + ++H    +   +E L+++R    + + F+ +D IR QL+S   +LED   P    
Sbjct: 407 GFSLEEKH---TLEKEVEALIEQRNEARRNRDFALSDQIRDQLKSMNIVLED--TP---- 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|70727478|ref|YP_254394.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|109894948|sp|Q4L3I9|SYC_STAHJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68448204|dbj|BAE05788.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 466

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 170/471 (36%), Positives = 259/471 (54%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++ + S+P       I  +  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKELNESVPD------IADRYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKELVDEGYAYESDGDVYFRTRKFEGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA------ 350
            V+R  M+  HYR PI++ ++ +  A+  L +   +        + +  I+D +      
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVNAAKSGLERIRNSYQLIEERETIATDIVDQSKYIEQI 345

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                   + + +D NT +A+ A + L++ + K                 ++   + +LG
Sbjct: 346 DAIIEQFETVMDDDFNTANAVTAWYDLSKLANKYVLENNTSTQVISRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +     +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED
Sbjct: 406 VPLKGNKSDMLLDEDIEKLIEERNEARKNKDFARADEIRDMLKEQNIILED 456


>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 460

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 173/482 (35%), Positives = 265/482 (54%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F   +   + MYVCG T YD  HIG+AR  + FDV+ R LR    + 
Sbjct: 3   LTLFNTLTREKETFTPREAGRVGMYVCGVTTYDLCHIGHARTYVAFDVVVRYLRKIGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII+RA +        +    +T +   +  +D   L  L P  +PR
Sbjct: 62  -VTYVRNITDLDDKIIKRAAEN------GEPFDALTQRYIDEMHRDFAALNLLEPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+  +I +I++++  G+AY+A+N +++FD S+  +YG  SR+ +++ + G RV  + 
Sbjct: 115 VTQHMDDIIRMIESLVTQGYAYQADNGDVLFDVSTFDDYGRLSRQNLEQLQAGARVDVEA 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W+SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DL FP
Sbjct: 175 SKLDPLDFVLWKKAKAGEPSWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSDLTFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA++     N W+H+G + ++  KMSKS GNF TI ++L        ++ 
Sbjct: 235 HHENEIAQSCCANQT-NYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVL-------NAYD 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------AV 351
           A  +R  +L +HYR  +++T   L +A   L +    +  +G+                 
Sbjct: 287 AETVRYFLLSSHYRSQLNYTQDNLEQAHAALERL--YTALRGLTPEQPDENLRLPYWNQF 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVC 397
             A+ +D N   A+  L +L RE  K  D        L  +    A +LG+         
Sbjct: 345 TDAMNDDFNAPEAMSVLFELVREINKARDNDAERAAQLAHVLVELADVLGLLQQSPESFL 404

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +   +  +++ IE L+ +R      K +++AD  R +L   G +LED      G   T+W
Sbjct: 405 QGGADDEVAL-IEALIAQRNKARAEKDWAAADEARDRLTEMGIVLED------GANGTQW 457

Query: 458 KQ 459
           ++
Sbjct: 458 RR 459


>gi|209527155|ref|ZP_03275668.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492404|gb|EDZ92746.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 486

 Score =  314 bits (805), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 185/489 (37%), Positives = 263/489 (53%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  ++P  ++MY CG TVYD+ H+G+AR    +DV+ R L +   E 
Sbjct: 3   LKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA+++  ++        ++ +    + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRAKEQESTM------EAVSQRFIDAYFEDLRRLNVRDAKAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
            T+HI ++  LI+ +   GHAY  + ++ ++    P+YG  SRR++++ +MG   RV   
Sbjct: 115 VTDHIKEIHQLIEQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVA 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELL+     
Sbjct: 235 DLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSK-------W-PQTS 341
            R     V+RL +L  HYR+P+DFT + +  A+         +L ++       W   +S
Sbjct: 289 -RPVDPMVVRLFILQGHYRKPLDFTDEAIASAKNGWETLKDGLLFAEQYGARLGWSADSS 347

Query: 342 TSKGIIDPAVLS----ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--------- 388
            SK       L     A+ +D NT   +  L +LA+E  +  +LL     +         
Sbjct: 348 PSKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTPSDRIYA 407

Query: 389 --------AHILGIEVCKE----HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQL 435
                   A + G+E   +       + IS A IE LV++R    K K ++  D IR QL
Sbjct: 408 TWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRDQL 467

Query: 436 ESKGFILED 444
           ++ G  L D
Sbjct: 468 QANGVTLID 476


>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 473

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 193/477 (40%), Positives = 272/477 (57%), Gaps = 55/477 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWKR+   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKRAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTST---SKGIIDP 349
             VIR  ++ +HYR P++F+   L EA+  L++           + QT+T    +G I+ 
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQGFIER 349

Query: 350 AVLSALYNDLNTVSAIQALHKLARE---------STKNHDLLPIFNASAHILGI------ 394
              +A+ +D NT  A+  L +L +E         + +   L        +ILG+      
Sbjct: 350 -FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVD 408

Query: 395 -----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                ++ +E L  +    IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 409 DFLKSDIGQEALALS-DAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTR 464


>gi|304395563|ref|ZP_07377446.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356857|gb|EFM21221.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
          Length = 461

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 262/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +   D   L  L P  +PR
Sbjct: 61  -LNYVRNITDIDDKIIKRANEN------GESIETLTNRMIGEMHNDFAALGILPPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I  GHAY A+N +++FD  S  +YG+ SR+ +++ + G RV    
Sbjct: 114 ATRHIAEIIELVEKLIARGHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF T+ ++L+        + 
Sbjct: 234 HHENEIAQSSCA-HDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTS-----KGIIDPAVLSA 354
           A  +R  ++  HYR  +++    L +A    E L +    T +S         +    SA
Sbjct: 286 AETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSVPASGGDAFEARFRSA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EV---CK 398
           + +D NT  A   L  +ARE            H L       A++LGI     E+     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKSEDGASAHALASKLREMANVLGILQQDPELFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +N      IE  V+ R      K ++ AD  R +L + G I+ED      G + + W+
Sbjct: 406 AQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVED------GPQGSSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|269140042|ref|YP_003296743.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985703|gb|ACY85532.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559869|gb|ADM42533.1| Cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 461

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY  G +
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYL-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +   S         +T +   +  +D   L    P  +PR
Sbjct: 61  -LKYVRNVTDVDDKIIKRALENKESC------EQLTERMLAEMHRDFDALNIARPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I   HAY A+N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV--------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +     PA          +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDAAAQPAADETFTARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D      L       AH+LG +E   EH  ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKGEDMAQASALAAQMRGLAHVLGLLEQTPEHFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+++R      K ++ AD  R  L + G +LED      G + T W+
Sbjct: 406 AAAGDDEVAQIEALIKQRNDARAAKAWALADEARDSLNAMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|254496542|ref|ZP_05109412.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354241|gb|EET12906.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 455

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 186/473 (39%), Positives = 267/473 (56%), Gaps = 40/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R    F +I+P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRTKEPFVSINPGKIGMYVCGITVYDHCHLGHARSMVCFDVIVRYLRSQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII RA +    IPI++    +T+       +D   L  L P ++PR
Sbjct: 61  -VTFVRNITDIDDKIIARANER--GIPIDE----LTAHYIDAMHEDMRALNILPPNYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LI+ ++  G+AY ++N ++ +   S   YG  S + ++    G RV    
Sbjct: 114 ATEHIATIIRLIERLLARGNAYVSDNGDVCYQVDSFAEYGKLSHKDLEGLMSGARVEVVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPYWASPWGNGRPGWHIECSAMAIEELGEHFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L +   KMSKS GNF TI ++L           
Sbjct: 234 HHENEIAQSEAATH-KPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHH------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLS----A 354
             V+R  +L +HYR  ++++ + L  A+  L++  QT      T  G +D   ++    A
Sbjct: 286 PEVVRYFLLSSHYRSSLNYSEENLFNAKKALTRLYQTMKDSPVTVNGELDNHWINEFNKA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEHLNKNIS 406
           + +D N+  A+  L +L+ E  KN    L       A ++G+      E  +   +++  
Sbjct: 346 MNDDFNSPVALSVLFQLSHEVNKNGTPVLATTLKHLAGLMGLLQSDSAEFLQAGFDEDDK 405

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            AIE+L+ ERL     + +  AD IR +L ++G  LED      G + T W++
Sbjct: 406 AAIEQLIAERLQARADRNWERADQIRAELLNQGIELED------GAKGTTWRK 452


>gi|256846544|ref|ZP_05552001.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256718313|gb|EEU31869.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 473

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 274/482 (56%), Gaps = 55/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT+++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NISIKEIAERYIKAYFEDTSKINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L  K F GR  
Sbjct: 234 PHHENERAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL--KYFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGI------- 346
              VIRL +L +HYR+P++F+   L + +  L +   T            KGI       
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
                I+   + A+  D NT  A+  + +L +   K  D + I                 
Sbjct: 346 ATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLVM 405

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KN 447
           K+
Sbjct: 466 KD 467


>gi|251809946|ref|ZP_04824419.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875020|ref|ZP_06283895.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251806489|gb|EES59146.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296348|gb|EFA88867.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329734647|gb|EGG70954.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 466

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 265/471 (56%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ ++                  + E E + S   + S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQHI 345

Query: 348 DPAV---LSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILG 393
           D  +    + + +D NT +A+ A + LA+       E+T +  +L     +++  + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I +  +  ++ +   IE+L++ER    K K F+ AD IR  L+++  ILED
Sbjct: 406 IPLKSKETDELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILED 456


>gi|283784327|ref|YP_003364192.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947781|emb|CBG87337.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 461

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPSYGQLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFIDA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNK--------- 403
           + +D NT  A   L  +ARE    KN D+      ++H+  I      L +         
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKNEDMAAANAMASHLRKISAVLGLLEQEPEAFLQSG 405

Query: 404 ----NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               +  +A IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAQIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 459

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 188/488 (38%), Positives = 272/488 (55%), Gaps = 62/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ + P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRAAEN------NESCKSLTERLIGEMHRDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   +AY ++N +++F  SS   YG  S + I++ + G RV  + 
Sbjct: 114 ATQHMPEIIDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVL-------KHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLS------- 353
           A  IR  +L  HYR  ++++   L +A+  L +    ++ KG+   ++PA  S       
Sbjct: 286 AGTIRYFLLSGHYRSQLNYSEDNLKQAKSALDRL--YTSLKGLDLNVEPADASEFVVKFK 343

Query: 354 -ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKE------HLNKN 404
            A+ +D NT  A   L  + RE    K  DL     A A  +G+++ KE       L+++
Sbjct: 344 AAMDDDFNTPEAYSVLFDMVREINRVKGSDL-----AQASAMGVKL-KELAGVLGLLDQD 397

Query: 405 ISI------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           + I             IE L+ ER      K + +AD  R  L + G ILED      G 
Sbjct: 398 VDIFFKGEGSDDEVAQIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GP 451

Query: 453 RMTRWKQK 460
             T W++K
Sbjct: 452 SGTTWRKK 459


>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|229470557|sp|B1XUY8|SYC_POLNS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 473

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 197/485 (40%), Positives = 263/485 (54%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+ I P  ++MYVCG TVYDF HIG+AR MIVFD++ R LR    E 
Sbjct: 2   LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      I   + IS +T++       D+  L  + P  +PR
Sbjct: 61  -VLYVRNITDIDDKIINRA------IENGEPISALTNRFVDAMHADSDELGLMHPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I QM  +I  +I +  AY+AN+ ++ F    +P YG  S + +DE   G RV    
Sbjct: 114 ATDYIAQMQGMIGKLIENELAYQANDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVGD 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W+SPWG GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 174 GKRDPLDFVLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCA----DRIEKTA---NIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            FPHHENEIAQS  A    DR    A   N W+HNG + +   KMSKS GNF  I ++L 
Sbjct: 234 QFPHHENEIAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVL- 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTST-SKG 345
                 +S+   VIR  ML THYR PI+++  +L EA          L++  +  T S G
Sbjct: 293 ------KSFDPEVIRFFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQTISLG 346

Query: 346 IIDP---AVLSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGI 394
             +P       A+ +D NT  AI  L  +  E  +          ++L    AS + L  
Sbjct: 347 SSNPWAKRFADAMNDDFNTPEAIAVLFDIVSEVNRAQGEEKQVLANILKALGASLNFLQR 406

Query: 395 E---VCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           +     +        ++   IE+ +  R+   + K F+ AD IRK L  +G +LED    
Sbjct: 407 DPTVFLQSSAKDQAGLSPEQIEEQIAARVAAKQAKDFAKADAIRKALLEQGIVLEDKPGG 466

Query: 449 DNGQR 453
             G R
Sbjct: 467 LTGWR 471


>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 458

 Score =  314 bits (804), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 182/463 (39%), Positives = 259/463 (55%), Gaps = 39/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +    +  +D    +T++       D   L  + P  +PR
Sbjct: 61  -LNYVRNVTDVDDKIIKRAAE--TGVTCDD----LTARLIGDMHADFDALGMVRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+Q+++   HAY A+N +++F   S  +YG  S + +++ + G RV    
Sbjct: 114 ATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGGDYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVL-SAL 355
           A  +R  ++  HYR  ++++   L +A   L +        P  + + G    A    A+
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAGGDEQVARFKEAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILGI-----EVCKEHLN 402
            +D NT  A  AL  L RE    K  D+       A       +LGI     E   +   
Sbjct: 346 DDDFNTPEAYSALFDLVREINRQKGEDMAVAAALGARLRELGAVLGILQQDPEAFLKGDE 405

Query: 403 KNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  +A IE+L+ +R      K +++AD  R +L   G +LED
Sbjct: 406 ADEEVAEIEQLIAQRNQARADKNWAAADAARNRLTEMGIVLED 448


>gi|256028172|ref|ZP_05442006.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766105|ref|ZP_06525483.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717660|gb|EFD81672.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 472

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 274/482 (56%), Gaps = 56/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIENVSI------KEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           RAT++I +MI +IQ +I  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 RATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++ + G KMSKS G+F+ + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCACG-GTFARYWMHNGYIKINGEKMSKS-GSFVLLRDIL--KHFEGR-- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P+DF+ + L + +  L +   T                      
Sbjct: 288 ---VIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQELL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS------------- 388
            +K  ++   + A+  D NT  A+  + +L +   K  D   I                 
Sbjct: 345 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLVM 404

Query: 389 --AHILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
              ++LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 405 IIQNVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 464

Query: 446 KN 447
           K+
Sbjct: 465 KD 466


>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
 gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
          Length = 530

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/439 (41%), Positives = 253/439 (57%), Gaps = 45/439 (10%)

Query: 1   MKKKI--KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           M KK+  K+YNT+ R++  F+   P  + MYVCG T Y F+HIG+AR  ++FDVL+R L+
Sbjct: 1   MAKKVEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQ 60

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +   E  VTY RN TDIDDKII+RA +        D  S+ +S+  ++++ D   L CL 
Sbjct: 61  HLGYE--VTYARNFTDIDDKIIKRANESG-----EDPFSL-SSRFCEEYLVDMDSLQCLR 112

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PTHQPR T+HI Q+  +I  II +G AY +  ++ F     PNYG  S +K++  + G R
Sbjct: 113 PTHQPRVTDHIEQIKDMITQIINNGFAYPSEGDVFFAVDKFPNYGQLSGQKLENHRAGER 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P+   K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+ YL   FDIHGGG 
Sbjct: 173 NPDT-RKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGS 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEI QS  A + E   + WIHNG +     KMSKS GN+ TI E+ E     
Sbjct: 232 DLIFPHHENEITQSAAACQ-ESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTE----- 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSK 344
            R  P  V R  ++  HYR P+++TV              Q L + E  LS +   S  +
Sbjct: 286 -RYHPLAV-RHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKE 343

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHIL--GIEVCKEHL 401
           G    + +  +     T  A + ++KL  E  TK  D L    +++HIL    +   + +
Sbjct: 344 GAAQNSKVVGI-----TADAKKCINKLRDEFETKMSDDL----STSHILTGAFQDALKFI 394

Query: 402 NKNISIAIEKLVQERLILL 420
           N +IS+  +KL + + + L
Sbjct: 395 NSSISMLKKKLQKPQQLSL 413


>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 460

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/481 (38%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I+   + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +   S         +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANENGESC------DSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATEFIAEIIELVEKLIERGFAYVADNGDVMFEVGQFDEYGKLSKQDLDQLQAGARVDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +   +     +  PA            A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLTVPAAGGEEYVKRFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE    KN +L        +    A ++GI         K  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRIKNDNLEQASAMGSLMRELADVIGILHQEPEAFLKGD 405

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEGLIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|270157070|ref|ZP_06185727.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269989095|gb|EEZ95349.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 464

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 186/475 (39%), Positives = 265/475 (55%), Gaps = 44/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R    F +I P  I +YVCG TVYD  HIG+AR M+ FDV+ R LR    + 
Sbjct: 12  LHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYD- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII RA +   +IPI++    +T++      +DT  L  L P  +PR
Sbjct: 71  -VKYIRNITDIDDKIIARAHER--AIPIDE----LTAQYIAAMNEDTQALNILPPDVEPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I+LI+ ++  G+AY ++N ++ +  +S  +YG  S + ++    G RV    
Sbjct: 124 ATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIVK 183

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGGLDL FP
Sbjct: 184 EKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQFP 243

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L +   KMSKS GNF TI ++L       +  P
Sbjct: 244 HHENEIAQSEAATE-KPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVL------AKHHP 296

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------A 354
             V+R  +L +HYR  ++++ + L  A+  L++  QT      I    L          A
Sbjct: 297 -EVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADGELDNHWINEFNQA 355

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG----------IEVCKEHLNKN 404
           + +D NT  A+  + +L+ E  K++   PI  A+   LG              +  L+  
Sbjct: 356 MNDDFNTPVALSVMFQLSHEVNKSNS--PILAATLKYLGNTMGLLLTDPSSFLQSGLDDE 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +IE+L+ ERL     + +  AD IR  L S+G  LED      G   T W++
Sbjct: 414 DKASIEQLINERLQARTERNWERADQIRADLLSRGIELED------GANGTTWRK 462


>gi|167033877|ref|YP_001669108.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|187629853|sp|B0KUU0|SYC_PSEPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166860365|gb|ABY98772.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 460

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 254/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    + 
Sbjct: 2   LTIYNTLSKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLS-AL 355
             V+R  ++ +HYR  I+++   L +A+  L ++       P+ +   G       S A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSMAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  D        L         +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDLEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR QL + G +LED K 
Sbjct: 406 EGKVDAAEVEGLIQARLQARTDKNWAESDRIRDQLTAMGVVLEDSKG 452


>gi|104781222|ref|YP_607720.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079208|sp|Q1IBP9|SYC_PSEE4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|95110209|emb|CAK14916.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 460

 Score =  313 bits (803), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 176/467 (37%), Positives = 256/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D +N+RMYVCG TVYD+ H+G+ R M+ FD++ R LR      
Sbjct: 2   LTIYNTLSKTKETFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRK--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T++      +D  RL+ L P  +PR
Sbjct: 60  ALTYVRNITDIDDKIINRANEN------GESFDALTARMIDAMHEDERRLSILKPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRKKIEDLRIGARIEVGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGAKPGEPFWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKG-IIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +++  L ++       P+ +   G         A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDSKGALERFYHALRGLPRVAAKGGEAFVERFTVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  +        L         +LG+      E  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRESDVEAAAGLAGRLRELGDVLGVLQLDADEFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K 
Sbjct: 406 EGKVDAAQVEALIQARLQARADKNWAESDRIRDQITAMGVVLEDGKG 452


>gi|238920879|ref|YP_002934394.1| cysteinyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
 gi|259511831|sp|C5B8V6|SYC_EDWI9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|238870448|gb|ACR70159.1| cysteinyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 461

 Score =  313 bits (802), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 263/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY  G +
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYL-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +   S         +T +   +  +D   L    P  +PR
Sbjct: 61  -LKYVRNVTDVDDKIIKRALENQESC------EQLTERMLAEMHRDFDALNIARPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I   HAY A+N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGAYVNCWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +              T+         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDVAAQPTADETFTTRFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D      L       AH+LG +E   EH  ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKGEDMAQANALAAQMRGLAHVLGLLEQTPEHFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+++R      K ++ AD  R  L + G +LED      G + T W+
Sbjct: 406 AAAGDDEVAQIEALIRQRNDARAAKAWALADEARDSLNAMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [NC10
           bacterium 'Dutch sediment']
          Length = 530

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 158/321 (49%), Positives = 202/321 (62%), Gaps = 16/321 (4%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL +K   F+   P  +RMY CGPTVYD AHIG+AR  + FDV++R L    G K V
Sbjct: 5   VYNTLHQKKERFEPAVPGEVRMYACGPTVYDRAHIGHARAALTFDVVWRYLERR-GYK-V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           +YVRN TD+DDKII+RA +      +  +   +  +  + + +D   L    PT +PRAT
Sbjct: 63  SYVRNYTDVDDKIIQRAAE------LGQSRESLVEEQIEAYRRDMDALGLRTPTEEPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HI +MI +I+ ++  G AY  + ++ F+     +YG  S R +DE + G RV     K+
Sbjct: 117 RHIREMIEIIRTLMAKGVAYSVDGDVYFEVRRSSDYGKLSHRGLDELQAGARVEVDPRKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF LWK S P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLIFPHHE
Sbjct: 177 DPLDFALWKASRPGEPAWESPWGPGRPGWHIECSAMSMKYLGETFDIHGGGADLIFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS CA   +  A  WIHNGF+N+   KMSKS GN +TI ELL      GR  P   
Sbjct: 237 NEIAQSECATG-KPFARYWIHNGFVNIRAEKMSKSLGNILTIRELL------GRISPC-A 288

Query: 307 IRLAMLMTHYREPIDFTVQRL 327
            +L +L THYR P++F+   L
Sbjct: 289 FKLFLLGTHYRAPVEFSEDAL 309


>gi|319946262|ref|ZP_08020502.1| cysteine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747644|gb|EFV99897.1| cysteine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 450

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 184/473 (38%), Positives = 252/473 (53%), Gaps = 41/473 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMSRDLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T
Sbjct: 61  GYE--VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
             PR    +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G    
Sbjct: 113 RHPRVVEFMDDIIRFVTDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGR 172

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  WESPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEVSWESPWGPGRPGWHIECSVMSTGILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T  
Sbjct: 233 ADLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKTID 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL-- 352
                    V+R      HYR+PI+FT + + +AE  L     T      G +DPA L  
Sbjct: 291 -------GQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLQS 343

Query: 353 ------SALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNK 403
                 +A+  D+N  + I  + +LA+     H   D+         + GI   +E L  
Sbjct: 344 FVDKFVAAMDEDINAANGITVVFELAKWINSGHYDQDVKEALAKMLEVFGIVFVEEVLAA 403

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IE L+ ER      K F+ AD IR QL ++G  L D K    G R TR
Sbjct: 404 D----IEALIAERQEARANKDFARADEIRDQLAAQGIKLLDTK---EGVRWTR 449


>gi|74311083|ref|YP_309502.1| cysteinyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|109894944|sp|Q3Z4P5|SYC_SHISS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|73854560|gb|AAZ87267.1| cysteine tRNA synthetase [Shigella sonnei Ss046]
 gi|323163965|gb|EFZ49773.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 461

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 272/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYAADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     ++  + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTEKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|289164517|ref|YP_003454655.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
 gi|288857690|emb|CBJ11533.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
          Length = 454

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 185/475 (38%), Positives = 263/475 (55%), Gaps = 44/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R    F +I P  I +YVCG TVYD  HIG+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII RA +   +IPI++    +T++      +DT  L  L P  +PR
Sbjct: 61  -VKYIRNITDIDDKIIARAHER--AIPIDE----LTAQYIAAMNEDTQALNILPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I+LI+ ++  G+AY ++N ++ +  +S  +YG  S + ++    G RV    
Sbjct: 114 ATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L +   KMSKS GNF TI ++L           
Sbjct: 234 HHENEIAQSEAATE-KPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKHH------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------A 354
             V+R  +L +HYR  ++++ + L  A+  L++  QT      I    L          A
Sbjct: 286 PEVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADGELDNHWINEFNQA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG----------IEVCKEHLNKN 404
           + +D NT  A+  + +L+ E  K++   PI  A+   LG              +  L+  
Sbjct: 346 MNDDFNTPVALSVMFQLSHEVNKSNS--PILAATLKYLGNTMGLLLTDPSSFLQSGLDDE 403

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +IE+L+ ERL     + +  AD IR  L S+G  LED      G   T W++
Sbjct: 404 DKASIEQLINERLQARTERNWERADQIRADLLSRGIELED------GANGTTWRK 452


>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|30316159|sp|Q8EG22|SYC_SHEON RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24347617|gb|AAN54844.1|AE015623_6 cysteinyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 459

 Score =  313 bits (802), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 186/484 (38%), Positives = 262/484 (54%), Gaps = 54/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I+P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITDIDDKII+RA +        +  + +T +   +  KD   L    P  +PR
Sbjct: 61  -VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY  A+ +++F  +S P YG  S + +++ + G RV    
Sbjct: 114 ATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLS-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  I+++ + L +A   L +     T+   +D  V            
Sbjct: 286 AETVRYFLLSGHYRSQINYSEENLKQARAALER---LYTAIKDVDLTVAAAPAEEFVAKF 342

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---------AHILGI------EV 396
            +A+ +D NT  A   L  + RE  +   L  +  AS         A +LG+        
Sbjct: 343 KAAMDDDFNTPEAYSVLFDMVREINR-LKLTDMAEASALAVSMKQLADVLGLLHQSPDAF 401

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            K   + +    IE L+ ER      K + +AD  R +L   G +LED      G   T 
Sbjct: 402 FKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARNRLNELGVVLED------GPSGTT 455

Query: 457 WKQK 460
           W++K
Sbjct: 456 WRKK 459


>gi|194017569|ref|ZP_03056180.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010841|gb|EDW20412.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 466

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 174/487 (35%), Positives = 260/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL RK  EF  ++P  ++MYVCGPTVY++ HIGNARP IV+D + + L Y     
Sbjct: 3   INIYNTLTRKKEEFVPLEPGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRKYLEY--SGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +    +P       I  +  Q + +D + L C      PR
Sbjct: 61  DVNFVSNFTDVDDKLIKAANELGEDVPT------IADRFIQAYFEDVSALGCKKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I  +I  G+AYEA+ ++ + T S   YG  S + IDE K G R+     
Sbjct: 115 VTENMDDIIAFIATLIEKGYAYEADGDVYYSTRSFEGYGKLSHQSIDELKTGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KRDALDFALWKAAKDQEISWDSPWGEGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+E  KMSKS GNF+ ++++++ +         
Sbjct: 235 HENEIAQSEALTG-KPFAKYWMHNGYINIENEKMSKSLGNFVLVHDIVKEQ-------DP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID-------- 348
            V+R  ML  HYR PI++++  L   +   ++   +         +S  I +        
Sbjct: 287 DVLRFFMLSVHYRHPINYSMDLLESTKSAFNRLKTSYANLHHRLESSTNITEDNAEWLAK 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAREST----KNHD-------LLPIFNASAHIL 392
                   +S + +D NT +AI  L +LA+++      +H         + +F     +L
Sbjct: 347 VEEQRATFISEMNDDFNTANAISVLFELAKQANYYMENDHTSEEVIKAFIGLFQEITSVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G  + ++H    +   +E L+++R    + + F+ +D IR QL+S   +LED   P    
Sbjct: 407 GFSLEEKH---TLDEEVEALIEKRNEARRNRDFALSDQIRDQLKSMNIVLED--TP---- 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|27467210|ref|NP_763847.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866107|ref|YP_187766.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242241861|ref|ZP_04796306.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|30316150|sp|Q8CTU1|SYC_STAES RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216111|sp|Q5HRM3|SYC_STAEQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|27314752|gb|AAO03889.1|AE016744_292 cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636765|gb|AAW53553.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242234639|gb|EES36951.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 466

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 171/471 (36%), Positives = 264/471 (56%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ ++                  + E E + S   + S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQQI 345

Query: 348 DPAV---LSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILG 393
           D  +    + + +D NT +A+ A + LA+       E+T +  +L     +++  + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILED 456


>gi|323938475|gb|EGB34726.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
          Length = 461

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    K  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGKYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|308185969|ref|YP_003930100.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056479|gb|ADO08651.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 500

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 188/485 (38%), Positives = 263/485 (54%), Gaps = 48/485 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY  
Sbjct: 38  RSMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLG 97

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  + YVRNITDIDDKII+RA +        ++I  +T++   +   D   L  L P  
Sbjct: 98  YQ--LNYVRNITDIDDKIIKRANEN------GESIETLTNRMIGEMHNDFAALGILPPDE 149

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT HI ++I L+Q +I   HAY A+N +++FD  S  +YG+ SR+ +++ + G RV 
Sbjct: 150 EPRATRHIAEIIELVQTLIARNHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVE 209

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL
Sbjct: 210 VADVKRNPMDFVLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDL 269

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA       N W+H+G + ++  KMSKS GNF T+ ++L+       
Sbjct: 270 MFPHHENEIAQSSCA-HDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQ------- 321

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTS-----KGIIDPAV 351
            + A  +R  ++  HYR  +++    L +A    E L +    T +S         +   
Sbjct: 322 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSVKAHGGEAFEARF 381

Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI-----EV-- 396
            SA+ +D NT  A   L  +ARE  +         H L       A++LGI     E+  
Sbjct: 382 RSAMDDDFNTPEAYSVLFDMAREVNRLKSEDGASAHGLASKLREMANVLGILQQDPELFL 441

Query: 397 -CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                +N      IE  V+ R      K ++ AD  R +L + G I+ED      G + +
Sbjct: 442 QSGAQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVED------GPQGS 495

Query: 456 RWKQK 460
            W++K
Sbjct: 496 SWRRK 500


>gi|77360989|ref|YP_340564.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|109894923|sp|Q3IF51|SYC_PSEHT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|76875900|emb|CAI87121.1| cysteine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 459

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 263/467 (56%), Gaps = 46/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+  +F+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+   + 
Sbjct: 2   VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +   SI  ND    +T + T+   +D   L  L P  +P 
Sbjct: 61  -LKYVRNITDVDDKIIKRANENGESI--ND----LTVRMTKAMHEDFDSLNMLRPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +++ +I  GHAY  A+ +++FD S+   YG+ S++ +   + G+RV    
Sbjct: 114 VTAHMDEIIEMVERLITKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FP
Sbjct: 174 DKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   K  N WIH G + +   KMSKS  NF T+ E+L       + + 
Sbjct: 234 HHENEIAQSCCANN-GKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KQYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
           A  +R  ++  HYR  ++++ + L +A    S   +  T+   ++P              
Sbjct: 286 AESVRYFLISGHYRSQLNYSQENLDQAR---SSLERIYTALRGVEPVACELDDNEYVIKF 342

Query: 354 --ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCK 398
             A+ +D NT  A+  L +LA+E        S +   L  I  + + +LG+     E   
Sbjct: 343 RKAMDDDFNTPEALPVLFELAKELNLVKDIDSQQAGQLAFILGSISEVLGVAQQDPEAFL 402

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +    +  +A IE L+ +R      K +++AD  R  L + G ILED
Sbjct: 403 QGGQDDDEVAQIEALIVKRNDARASKNWAAADEARDALSALGVILED 449


>gi|319891494|ref|YP_004148369.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161190|gb|ADV04733.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465335|gb|ADX77488.1| cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 466

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 178/472 (37%), Positives = 263/472 (55%), Gaps = 49/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   FQ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKEVFQPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++   ++P       I  +  Q F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKLIKRSQELGETVPE------IAERYIQAFYEDTEALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+ ++  G+AYE+  ++ F T    +YG  S + ID+ K+G R+ +  +
Sbjct: 114 VMDHMDDIIKFIKKLVDEGYAYESGGDVYFRTRQFEDYGKLSHQSIDDLKVGARIEQGEN 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+   LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFEKLGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  E  AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNH-ETFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTV-----------------QRLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ +                 Q LTE E + +     +T    I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVEAARSGLERIRNSYQALTERETVATDLTNDATMLTQI 345

Query: 348 DPAVL----SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
           D A+L    + + +D NT +AI A + L + + K                 +F   + +L
Sbjct: 346 D-AILTQFETVMDDDFNTANAITAWYDLVKLANKYLLEDNTSTQVIQRFKEVFAIFSDVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G+ +   H+   +   IE+L++ER    + K ++ AD IR QL+++  ILED
Sbjct: 405 GVPLTSNHVEGLLDEEIERLIEERNAARQAKDYARADEIRDQLKAQNIILED 456


>gi|26989624|ref|NP_745049.1| cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|37999406|sp|Q88IU4|SYC_PSEPK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24984507|gb|AAN68513.1|AE016483_4 cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 460

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 254/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR++I++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKRIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLS-AL 355
             V+R  ++ +HYR  I+++   L +A+  L ++       P+ +   G       S A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  D        L         +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR QL + G +LED K 
Sbjct: 406 EGKVDAAEVEGLIQARLKARADKNWAESDRIRDQLTAMGVVLEDSKG 452


>gi|15612674|ref|NP_240977.1| cysteinyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|11387138|sp|Q9KGF4|SYC_BACHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|10172723|dbj|BAB03830.1| cysteinyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 466

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 183/488 (37%), Positives = 263/488 (53%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++N+L RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D++ R L+Y   E 
Sbjct: 3   IQVFNSLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMIRRYLKYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      + + +  + ++  + + +DT+ L  L   H PR
Sbjct: 62  -VLFVSNFTDVDDKIIRVANE------LGEDVFAVANRFIEAYKQDTSALGVLEADHHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  I+ +   G+AYE   ++ F T     YG  S + ID+   G R+     
Sbjct: 115 VTETMSEIISFIRVLEEKGYAYEQGGDVYFRTRKFKEYGKLSAQSIDDLLSGARIEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKAAKEGEVSWDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLKFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C    +  AN W+HNGF+NL+  KMSKS GN +  NE++       R   A
Sbjct: 235 HENEIAQSECMTG-KPMANYWLHNGFINLDNEKMSKSLGNVVLANEMI-------RQHSA 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
            V+R  ML  HYR PI+F+          ++RL  A   L    Q S   G  +P +   
Sbjct: 287 EVLRFFMLSAHYRSPINFSDELLEGAKRGLERLQTAVSSLVHRLQESADFGGTEPWLERI 346

Query: 352 -------LSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                  +  + +D N+ + I  L  LA+E+ +               + +FN    +LG
Sbjct: 347 DEFRGRFIEEMDDDFNSANGIAVLFDLAKEANRYLREEQTSKAVLQSFIDLFNELGGVLG 406

Query: 394 IEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           + + +  E L++ I   IE+  + R    K K F  AD IR QL+++G ILED   P   
Sbjct: 407 VTLNRQEELLDEEIERLIEERNEAR----KAKNFQRADDIRDQLKAEGIILED--TPQG- 459

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 460 ---VRWKR 464


>gi|218547963|ref|YP_002381754.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226735060|sp|B7LJI4|SYC_ESCF3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218355504|emb|CAQ88115.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113037|gb|EGC07013.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 461

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 272/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D++     ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMVAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|212636030|ref|YP_002312555.1| cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226735064|sp|B8CRG0|SYC_SHEPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 459

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 186/481 (38%), Positives = 262/481 (54%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F  I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCDSLTERLIGEMHRDFDSLNMARPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   HAY  AN +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATLHMPEIIEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    K  N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-KYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  +L  HYR  ++++ + L +A+  L + +         +D A           A
Sbjct: 286 AATVRYFLLSGHYRSQLNYSEENLKQAKSGLERIYTALKDLDLTVDAAPAEAFIAQFKRA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------HILGIEV---CKE 399
           + +D NT  A   L ++ RE  +   L  +  ASA             ILG +V    K 
Sbjct: 346 MDDDFNTPEAYSVLFEMVREINR-LKLTDMQQASALGVALKQLADVLGILGQDVDTFFKG 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + +    IE L+ ER      K + +AD  R  L + G ILED      G   T W++
Sbjct: 405 EGSDDEVAEIEALIVERNRARTEKDWPAADVARDGLNALGVILED------GPEGTTWRK 458

Query: 460 K 460
           K
Sbjct: 459 K 459


>gi|260582005|ref|ZP_05849800.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094895|gb|EEW78788.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 459

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 267/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV            
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGADQSAVAFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE          K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSNDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|187629854|sp|A5WEW9|SYC_PSYWF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 505

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 192/505 (38%), Positives = 261/505 (51%), Gaps = 69/505 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIY+++      F+ +    I MYVCG TVYD+ HIG+AR M+ FDV+ R LR+  
Sbjct: 22  QAALKIYDSMTTNKRSFEPLQAGKIGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLG 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRNITDIDDKII RA +        + I  +T +  +   +D   L C  P  
Sbjct: 82  YE--VNYVRNITDIDDKIIARANEN------GEPIGELTHRFIKAMHEDAAALGCENPDA 133

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT HI +M+ +I  +    HAY A+N ++ +   +   YG  S+RK+++ + G+RV 
Sbjct: 134 EPRATEHIDEMLDMIGTLEQKQHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVD 193

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF+LWK +   EP W S WG GRPGWHIECSAMS+  LG  FDIHGGG DL
Sbjct: 194 VDTDKKNPFDFVLWKAAKAGEPQWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDL 253

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+H GF+N++G KMSKS GNF TI E+++       
Sbjct: 254 QFPHHENEIAQSEAATGCTYAHN-WMHVGFINVDGEKMSKSLGNFFTIREVMQ------- 305

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTS------- 343
            +    IR  +L +HYR  ++F+   L EA   L++  Q          TS S       
Sbjct: 306 KFHPETIRFFILSSHYRSQVNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAAESIES 365

Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--------------------N 378
                 G      ++A+ +D NT  AI  L  LA+E  K                     
Sbjct: 366 INAEHAGTHSADFIAAMNDDFNTPQAISVLFSLAKEVNKLARDADDADTQAQLQLQAVQL 425

Query: 379 HDLLPIFNAS----AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
             L  I N      A  L  ++ +   ++     IE L+QERL     K F+ AD IR  
Sbjct: 426 RALAGILNIGQLNPAEFLQAQIGEVAEDQMSDEQIEALIQERLDSKANKNFARADEIRDL 485

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L++ G  LED      G+  T W++
Sbjct: 486 LQNSGIELED------GKLGTTWRR 504


>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 473

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 189/475 (39%), Positives = 271/475 (57%), Gaps = 51/475 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   EK  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI------E 395
             +A+ +D NT  A+  L +L +E       +  D   +  ++     +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             K  + ++        IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464


>gi|269123413|ref|YP_003305990.1| cysteinyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314739|gb|ACZ01113.1| cysteinyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 457

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 179/469 (38%), Positives = 273/469 (58%), Gaps = 55/469 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  K+ EF  I+   + +YVCGPTVY++ H GN+RP+IVFD L R   +     
Sbjct: 1   MKIYNSLNNKLEEFIPINDKKVGIYVCGPTVYNYIHFGNSRPVIVFDTLAR--HFINQGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V++V+N TDIDDKII ++ +E+  IP  +    I+ K    F++D ++L  L    +P+
Sbjct: 59  EVSFVQNFTDIDDKIINKSIEEN--IPFEE----ISKKYINAFMEDISKLNILDIVKRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + +IP +I +I+ +I +G+AYE + +++F  +    YG  S +K+ +  +G R+ +   
Sbjct: 113 VSEYIPDIIEMIEVLIYNGYAYERDGDVLFRVNKYLEYGKLSNQKLSDLSVGVRINKDEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK+    EP W +P+  GRPGWHIECSAMS   LG  FDIH GG+DL+FPH
Sbjct: 173 KENPLDFVLWKKKKENEPYWNAPFSEGRPGWHIECSAMSRKLLGDNFDIHAGGIDLLFPH 232

Query: 245 HENEIAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE AQS C  +     AN W+HNGFL + G KMSKS GNFIT+ E+L         + 
Sbjct: 233 HENERAQSVCFCNEKSSFANYWMHNGFLEVNGEKMSKSLGNFITLREIL-------NDYS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------KWPQTSTS--------KGII- 347
             V+R  ML THYR+PI+++++ L  ++  L+       ++ Q   +        K II 
Sbjct: 286 GDVVRFFMLSTHYRKPINYSIENLEISKKTLNSIIDTIDRYKQIDVTNNSNNEIKKDIIE 345

Query: 348 -DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH---ILGIEVCKEHLNK 403
            + A+ SAL +DLNT  AI  +H L +++ K        N+S      L +E+ ++++  
Sbjct: 346 FELAINSALNDDLNTPLAISCIHDLIKKTNK------YLNSSIFREITLVVEILEKYIIN 399

Query: 404 NISIAIEK----LVQERLILL--------KM-KKFSSADYIRKQLESKG 439
            + I +EK    ++ E LI L        +M K ++ +D IR +L   G
Sbjct: 400 VLGIKMEKNKNDMLSESLIELLNKIREDARMNKNYALSDMIRDELLKLG 448


>gi|156934911|ref|YP_001438827.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533165|gb|ABU77991.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
          Length = 479

 Score =  313 bits (801), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 192/482 (39%), Positives = 269/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  I FDV+ R LR+  G K
Sbjct: 20  LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFL-GYK 78

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        D ++++    T+   KD   L  L P  +PR
Sbjct: 79  -LKYVRNITDIDDKIIKRANENG-----EDFVALVDRMVTEMH-KDFDALNILRPDSEPR 131

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A N +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 132 ATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVAD 191

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 192 SKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 251

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L+        + 
Sbjct: 252 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVLQ-------HYD 303

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGI-----IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S  +      +   + A
Sbjct: 304 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVEA 363

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILG-IEVCKEHL---- 401
           + +D NT  A   L  +ARE        S+  + L       A +LG +E   E      
Sbjct: 364 MNDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG 423

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+ +RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 424 AQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILED------GPQGTTWR 477

Query: 459 QK 460
           +K
Sbjct: 478 RK 479


>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166225306|sp|A0KYM2|SYC_SHESA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 461

 Score =  313 bits (801), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 261/483 (54%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   E 
Sbjct: 4   LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITDIDDKII+RA +        +  + +T +   +  KD   L  + P  +PR
Sbjct: 63  -VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDFEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY  A+ +++F  +S P YG  S + +++ + G RV    
Sbjct: 116 ATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDD 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 176 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 236 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  I+++ + L +A   L +     T+   +D  V            
Sbjct: 288 AETVRYFLLSGHYRSQINYSEENLKQARAALER---LYTAIKDVDLTVTAAPAEEFVAKF 344

Query: 353 -SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNAS------AHILGI------EVC 397
            +A+ +D NT  A   L  + RE    K  D+      +      A +LG+         
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFF 404

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K   + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED------GPSGTTW 458

Query: 458 KQK 460
           ++K
Sbjct: 459 RKK 461


>gi|210632458|ref|ZP_03297386.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
 gi|210159553|gb|EEA90524.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
          Length = 493

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 191/508 (37%), Positives = 258/508 (50%), Gaps = 75/508 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+   +  +F  I+   +RMYVCGPTVYD  HIGNAR  I FDV+ R L     E 
Sbjct: 1   MKIYNSATHQKEDFHPIEEGRVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII RA ++  +         + ++ + +F+        L P  +PR
Sbjct: 60  -VTFAQNLTDVDDKIINRANEQGRTA------EEVATEFSNKFIGVMRAANVLDPDARPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I+ +I   HAY A+N ++ F   S P+YG  S R ID+  +G R+ E  
Sbjct: 113 ATKEIGAMIGMIKTLIEGDHAYAADNGDVYFSVRSDPSYGEVSGRNIDDLMVGARIEENE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH EC+AM   YLG   DIHGGG DL FP
Sbjct: 173 DKRDPLDFALWKAAKPGEPSWKSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA   E  AN W+H G L ++G KMSKS GNF T+ E+LE          
Sbjct: 233 HHENECAQATCAWH-EGFANTWMHTGMLLVDGEKMSKSLGNFFTLAEVLEKHS------- 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQ-----------TSTS 343
           A  +RL ML THYR P+DF+ +RL  AE  L+         KW                 
Sbjct: 285 AAALRLLMLQTHYRSPLDFSWERLEGAENSLARIAGTCRNLKWAADHVEGEPNAELAEAL 344

Query: 344 KGIIDPAVL---SALYNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNA 387
              ++ A     + + +D NT  AI A  +L  E+ K                   +   
Sbjct: 345 TAAMEKAAADYEACMDDDFNTAGAIAAYFQLVTEANKYLEQAAGAVDEVTARACAAVIAG 404

Query: 388 SAHILGIE--VCKEHL---------------NKNISIAIEKLVQERLILLKMKKFSSADY 430
           +   LG+E  V +E L                 ++  A EK+++ R      K +++AD 
Sbjct: 405 ALAQLGVELPVIEEPLPVGLLGVAAGLTGYTGDSVDEAAEKILEARAAARAAKDWTTADA 464

Query: 431 IRKQLESKGFILEDYK-----NPDNGQR 453
           IR QL   G  +ED        P NG R
Sbjct: 465 IRDQLRDMGLAIEDTAAGSRITPQNGDR 492


>gi|284053526|ref|ZP_06383736.1| cysteinyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 486

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 188/490 (38%), Positives = 261/490 (53%), Gaps = 66/490 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  ++P  ++MY CG TVYD+ H+G+AR    +DV+ R L +   E 
Sbjct: 3   LKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA+ EH S      +  ++ +    + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRAK-EHDST-----MEEVSQRFIDAYFEDLRRLNVRDANAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
            T+HI ++  LI  +   GHAY  + ++ ++    P+YG  SRR++++ +MG   RV   
Sbjct: 115 VTDHIQEIHQLIDTLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVA 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELL+     
Sbjct: 235 DLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSK-------WPQTST 342
            R     V+RL +L  HYR+P+DFT + +  A          +L ++       W   S 
Sbjct: 289 -RPVDPMVVRLFILQGHYRKPLDFTDEAIASANNGWETLKDGLLFAQQYGAPLGWSDDS- 346

Query: 343 SKGIIDPAVLS------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-------- 388
           S G  D    +      A+ +D NT   +  L +LA+E  +  +LL     +        
Sbjct: 347 SPGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTQSDRIY 406

Query: 389 ---------AHILGIEVCKE----HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQ 434
                    A + G+E   +       + IS A IE LV++R    K K ++  D IR Q
Sbjct: 407 AIWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRDQ 466

Query: 435 LESKGFILED 444
           L++ G  L D
Sbjct: 467 LQASGVTLID 476


>gi|187928101|ref|YP_001898588.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|229558781|sp|B2U9P8|SYC_RALPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187724991|gb|ACD26156.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 463

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 188/486 (38%), Positives = 269/486 (55%), Gaps = 54/486 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + +S +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETMSALTGRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG+ FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHHENEIAQS  A    KT  N+W+HNGF+ +   KMSKS GNF TI ++L+    
Sbjct: 234 DLQFPHHENEIAQSEGA--TGKTFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVLKV--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTS 343
               + A V+R  +L +HYR  ++++   L +A   L++               P  S S
Sbjct: 289 ----YDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSES 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH- 400
            G      L A+ +D NT  A+  L +LA E   T++ +L     A A ++G+     H 
Sbjct: 345 HG---KRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVIGLLGRDPHV 401

Query: 401 -LNKNIS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            L   +S        +E  ++ER      + F+ AD IR  L + G +LED         
Sbjct: 402 FLQGGVSADGVDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLEDKPGG----- 456

Query: 454 MTRWKQ 459
           +T W++
Sbjct: 457 LTEWRR 462


>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 460

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 185/467 (39%), Positives = 264/467 (56%), Gaps = 41/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  + MYVCG TVYD+ HIG+AR MI FD++ R +R+   + 
Sbjct: 2   LKVYNTLSGKKEEFVPLVPGKVGMYVCGNTVYDYCHIGHARAMISFDIIARHIRFSGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA  E+   P +  + +I ++      +D  +L    P  +P+
Sbjct: 61  -LNYVRNITDVDDKIIKRA-AENDETPESLTLRMIEAQ-----TQDELKLGNKLPDREPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I +I  ++  G AY+ +  ++ F T     YG  + RK+++   G R+  + 
Sbjct: 114 ATEFMQEIIDMISVLVDKGFAYQGSTGDVYFRTEKHEAYGKLNNRKLEDMLAGARIDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF+LWK +   E  W+SPWG GRPGWHIECSAMS++ LG  FDIHGGG DL FP
Sbjct: 174 AKENPADFVLWKSAKEGEVHWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA+  +   N W+H G + +   KMSKS GNF T+ ++LE        + 
Sbjct: 234 HHENEIAQSECANGTD-YVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLE-------KYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS--------AL 355
             VIR  M+ + YR PID++ Q L EA++ L +   +   + + D  + S        A+
Sbjct: 286 PEVIRFLMVSSQYRSPIDYSEQSLLEAKVGLERMYTSLQGQALTDDYIASSYTERYQQAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNH----DLLPI----FNASAHILGIE-------VCKEH 400
            +D NT  AI  L  L RE  K      D  PI     +  A +LG+        +    
Sbjct: 346 DDDFNTPVAISVLFDLVRELNKAKASAADNAPILAKELSVLAELLGLLGQDPEYFLKNSV 405

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           LN  IS A IE L+ ER+   K K F+ +D IR +L  +G  L D +
Sbjct: 406 LNNGISEAEIETLIAERIQARKDKNFARSDEIRDELSEQGITLLDSR 452


>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 473

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 192/477 (40%), Positives = 269/477 (56%), Gaps = 55/477 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----------------STKNHDLLPIFNASAH--- 390
             +A+ +D NT  A+  L +L +E                 ST  H L  I     H   
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATMLYSTLRH-LTNILGLVQHNVD 408

Query: 391 -ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             L  ++ +E L  +    IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 409 DFLKSDIGQEALALS-DAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464


>gi|225568316|ref|ZP_03777341.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
           15053]
 gi|225162845|gb|EEG75464.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
           15053]
          Length = 468

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 186/491 (37%), Positives = 257/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLFNTLTRKKEEFVPVEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S         I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGVSA------DEISKRYIKECKKDMEGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I ++I  G+AYE N  + F T S  +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVEMIGSLIEKGYAYEKNGTVYFRTRSFKDYGKLSHKNLDDLRTGERSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWDSPWSDGRPGWHIECSVMSRKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++  KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNHKMSKSLGNFRTVREISE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFT----------VQRLTEA-------------EILLSKWP 338
           +   V+R  ML  HYR P++F+          ++R+  A             E + ++  
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMEASRNGLERIVNAAGNLKFLMGSAKSEEMTAQER 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
           +             +A+ +D NT  A+ A+ +L +      D          LL      
Sbjct: 345 EAFAGSEEFVKGFEAAMDDDFNTADAVAAVFELVKYINTTADAHSSRAYLQALLSRLVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+ V K+     +   IEKL+ ER    K K F+ AD IR  L  KG ILED +  
Sbjct: 405 TDVLGLIVDKKE--DMLEEEIEKLIAERQAARKEKNFARADEIRGTLLEKGIILEDTREG 462

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 463 ------VKWKK 467


>gi|229815837|ref|ZP_04446161.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
           13280]
 gi|229808532|gb|EEP44310.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
           13280]
          Length = 532

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 185/494 (37%), Positives = 257/494 (52%), Gaps = 70/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+   +  +F+ I+   +RMYVCGPTVYD  HIGNAR  I FDV+ R L     E 
Sbjct: 45  MKIYNSATHQKEDFRPIEEGKVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASGYE- 103

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII RA ++  +         + ++ + +F+        L P  +PR
Sbjct: 104 -VTFAQNLTDVDDKIINRANEQGRTA------EEVATEFSDKFIGVMRAANVLDPDVRPR 156

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I+ +I  GHAY A+N ++ F   S P+YG  S R ID+  +G R+ E  
Sbjct: 157 ATKEIGAMIGMIKTLIEGGHAYAADNGDVYFSVRSDPSYGEVSGRNIDDLMVGARIEENE 216

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH EC+AM   YLG   DIHGGG DL FP
Sbjct: 217 DKRDPLDFALWKAAKPGEPSWKSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDLAFP 276

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA   E  AN W+H G L ++G KMSKS GNF T+ E+LE          
Sbjct: 277 HHENECAQATCAWH-EGFANTWMHTGMLLVDGEKMSKSLGNFFTLAEVLEKHS------- 328

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KW--------PQTSTSKGI 346
           A  +RL ML THYR P+DF+ +RL  AE  L+         KW        P    +  +
Sbjct: 329 AAALRLLMLQTHYRSPLDFSWERLEGAENSLARIAGTCRNLKWAADHAEGEPNAELADAL 388

Query: 347 IDPAVLSA------LYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNA 387
                 +A      + +D NT  A+ A  +L  E+ K  +                + + 
Sbjct: 389 TAAMEKAAADYEACMDDDFNTAGAVAAYFQLVTEANKYLEQAAGAVDEGAARVCAAVISG 448

Query: 388 SAHILGIE--VCKEHL---------------NKNISIAIEKLVQERLILLKMKKFSSADY 430
           +   LG++  V +E L                 ++  A E ++  R      K + +AD 
Sbjct: 449 ALAQLGVKLPVIEEPLPAELAGVAAELVGFEGDDVDAAAEAILSARAEARAAKDWGTADA 508

Query: 431 IRKQLESKGFILED 444
           IR +L+  G  +ED
Sbjct: 509 IRDRLKELGLAIED 522


>gi|187608842|sp|A7MK00|SYC_ENTS8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 192/482 (39%), Positives = 269/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  I FDV+ R LR+  G K
Sbjct: 2   LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        D ++++    T+   KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANENG-----EDFVALVDRMVTEMH-KDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A N +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 SKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L+        + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGI-----IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S  +      +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILG-IEVCKEHL---- 401
           + +D NT  A   L  +ARE        S+  + L       A +LG +E   E      
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+ +RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|293367905|ref|ZP_06614543.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291317934|gb|EFE58342.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329738050|gb|EGG74271.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 466

 Score =  312 bits (800), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 171/471 (36%), Positives = 263/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F  D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYDDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ ++                  + E E + S   + S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQQI 345

Query: 348 DPAV---LSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILG 393
           D  +    + + +D NT +A+ A + LA+       E+T +  +L     +++  + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILED 456


>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783950|ref|YP_089779.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|61216165|sp|Q65PC8|SYC_BACLD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346452|gb|AAU39086.1| CysS [Bacillus licheniformis ATCC 14580]
          Length = 467

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 268/487 (55%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IVFD + + L Y   E 
Sbjct: 3   LTLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P+      I  +  + + +D   L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEEVPV------IAERFIKAYFEDVGSLGCTKADCHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  IQ +I  G+AYEA+ ++ + T S   YG  S + +DE + G R+     
Sbjct: 115 VTENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQS-EALTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KEHDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIIDP----- 349
            V+R  ML  HYR PI+++V+          RL  A   L    ++ST+    D      
Sbjct: 287 QVLRFFMLSVHYRHPINYSVELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWLEK 346

Query: 350 ------AVLSALYNDLNTVSAIQALHKLAR--------ESTKNH---DLLPIFNASAHIL 392
                 A  +A+ +D NT +AI  L  LA+        ++T  H     + +F+    +L
Sbjct: 347 IEEQRKAFQTAMDDDFNTANAISVLFDLAKHANYYLQEKNTAEHVIQAFIQLFDEICSVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G  + ++ L   +   IE+L+++R    + + F+++D IR QL+S   ILED   P    
Sbjct: 407 GFSLKEQEL---LDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILED--TP---- 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
          Length = 602

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 169/389 (43%), Positives = 229/389 (58%), Gaps = 41/389 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NT+ +K   F+A +P  + MYVCG T YD++HIG+AR  + FD+LYR L+    E 
Sbjct: 105 LYIFNTMSKKKELFKAREPGKVGMYVCGVTAYDYSHIGHARVYVTFDILYRYLQRLGYE- 163

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TDIDDKII RA        + +    ++++  ++F  D   L CL P+ +PR
Sbjct: 164 -VKYVRNFTDIDDKIISRAND------LGENPLSLSNRFCKEFQVDMAELNCLPPSVEPR 216

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+HI Q+I +IQ I+ +G+AY   N ++ F     P YG  S RK+D+ + G R+    
Sbjct: 217 VTDHINQIIEMIQQILRNGYAYVVENGDVYFSVDKYPKYGCLSGRKLDDNRAGERIAVDS 276

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+ +LG  FDIHGGG+DLIFP
Sbjct: 277 RKQNPADFALWKSAKPSEPFWDSPWGPGRPGWHIECSAMSAAHLGYCFDIHGGGVDLIFP 336

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +     WIHNGF+ ++  KMSKS GNF TI E+LE       S+ 
Sbjct: 337 HHENEIAQS-CASCNDSNVPYWIHNGFVTVDAEKMSKSLGNFFTIREVLE-------SYH 388

Query: 304 APVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQTSTSKGI--- 346
              +RL +  THYR  ++++               Q L + E  LS   + S  + I   
Sbjct: 389 PLALRLFLSGTHYRSQLNYSKSQLENASERLFYIYQTLKDCEECLSGHVRQSIGQPIPED 448

Query: 347 -------IDPAVLSALYNDLNTVSAIQAL 368
                  I  A  S++ NDL+   A+ AL
Sbjct: 449 IQKRINNIHNAFSSSMSNDLHIAMALDAL 477


>gi|207722904|ref|YP_002253338.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 465

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 180/472 (38%), Positives = 257/472 (54%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTDRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L+     
Sbjct: 234 DLQFPHHENEIAQAEGANG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKV---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSK 344
              +   V+R  +L +HYR  ++++   L +A   L++               P  S S 
Sbjct: 289 ---YDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSESH 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH-- 400
           G        A+ +D NT  A+  L +LA E   T++  L+    A   ++G+     H  
Sbjct: 346 G---QRFREAMNDDFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAF 402

Query: 401 LNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L   +  A        +E  ++ R +    + F+ AD IR  L + G +LED
Sbjct: 403 LQGGVGAAADGLDTVEVEARIEARRVAKAARDFARADGIRADLLAAGIVLED 454


>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
 gi|187631635|sp|A9KWH4|SYC_SHEB9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 459

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 262/483 (54%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A++ +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++   L +A   L +     T+   +D  V            
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALER---LYTAIKDVDLTVAAAPAEEFIAKF 342

Query: 353 -SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCK 398
            +A+ +D NT  A   L  + RE          +   L       A +LG+     E   
Sbjct: 343 KAAMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFF 402

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +    +  +A IE L+ ER      K +++AD  R +L   G  LED      G   T W
Sbjct: 403 QGGGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED------GPSGTTW 456

Query: 458 KQK 460
           ++K
Sbjct: 457 RKK 459


>gi|288554704|ref|YP_003426639.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545864|gb|ADC49747.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 465

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 175/486 (36%), Positives = 256/486 (52%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN+L +K   F  ++   ++MYVCGPTVY++ HIGNARP IV+D++ R L Y   E 
Sbjct: 3   IQLYNSLTKKKETFVPMEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMVRRYLEYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII  A +      + + +  + ++  +++  DT  L        PR
Sbjct: 62  -VEFISNFTDVDDKIIRAAHE------LGEDVFAVANRFIEEYHNDTCALGVKKANKHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  IP++I  +  +I   +AYE+  ++ F T     YG  S + ID+ + G R+     
Sbjct: 115 VTETIPEIIEFVAKLIEKEYAYESGGDVYFRTKKFEGYGKLSSQSIDDLRSGARIEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  WESPWG GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKAAKEGEVSWESPWGDGRPGWHIECSAMVKKYLGDTIDIHAGGKDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  AN W+HNGF+N+   KMSKS GNF+  ++++       R   A
Sbjct: 235 HENEIAQSEALTG-KTMANYWMHNGFININNEKMSKSLGNFVLAHDII-------RQHSA 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKG--------- 345
            V+R  ML  HYR PI+F+          ++RL  A   L      S   G         
Sbjct: 287 EVVRFFMLTAHYRSPINFSDELLDGAKNGLERLRTAVSSLEHRLGESADYGEKAEWLTKI 346

Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
             +  A +  + +D N+ + I  +  LA+E+ +            H  + +F+  A +LG
Sbjct: 347 SQLKEAFIKEMDDDFNSANGIAVMFDLAKEANRYLREEQTSKEVLHAFIDLFDELADVLG 406

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           I V  +   + +   IE L++ER    + + F  AD IR QL+ +G +LED         
Sbjct: 407 IVVRTQ--AELLDTEIEALIEERNETRRSRNFKRADEIRDQLKDQGILLEDTAQG----- 459

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 460 -VRWKR 464


>gi|119485660|ref|ZP_01619935.1| Cysteinyl-tRNA synthetase, class Ia [Lyngbya sp. PCC 8106]
 gi|119456985|gb|EAW38112.1| Cysteinyl-tRNA synthetase, class Ia [Lyngbya sp. PCC 8106]
          Length = 481

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 194/488 (39%), Positives = 261/488 (53%), Gaps = 67/488 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R    F  ++P +++MY CG TVYD+ H+G+AR  I +DV+ R L +     
Sbjct: 3   LKIYNTQTRTKETFIPLEPQHVKMYCCGVTVYDYCHLGHARSYIFWDVVRRYLEWL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA++E      N ++  ++ +  + + +D  RL        PR
Sbjct: 61  TVQYVQNFTDIDDKILNRAKKE------NSSMEAVSERFIEAYYEDLRRLNIRDADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
           AT++I ++  LIQ +   G+AY +  ++ +     P YG  S RK D+ + G   RV   
Sbjct: 115 ATDNISEIYQLIQQLEKKGYAYASKGDVFYSVEKFPEYGKLSGRKQDQLQAGASGRVSGA 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  KK+ +DF LWK S P EP W+SPWG GRPGWHIECSAM    LG   DIHGGG DLI
Sbjct: 175 EGEKKHSSDFALWKASKPGEPAWKSPWGEGRPGWHIECSAMVRQLLGATIDIHGGGGDLI 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGF+ + G KMSKS GNF TI +LLET       
Sbjct: 235 FPHHENEIAQSEAAN-CEPLARFWMHNGFVTVGGEKMSKSLGNFTTIRQLLETVD----- 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWPQTSTSKGIID----- 348
               VIRL +   HYR+P+DFT   +T A        E LL K  Q     G +D     
Sbjct: 289 --PMVIRLFVFQAHYRKPLDFTPDAITSAENGWNTLCEGLLFK-SQHGEKLGWLDKNDLP 345

Query: 349 PAVLS--------ALYNDLNTVSAIQALHKLARE----------STKNHDLLPIFNAS-- 388
           PA+ S        A+ +D NT   +  L +LA+E            K    LP    +  
Sbjct: 346 PALHSEAVERFQIAMDDDFNTPGGLAVLFELAKELRTEGNILTHEGKTETPLPQIQQTWW 405

Query: 389 -----AHILGIEVCKEHLNKNISIA-------IEKLVQERLILLKMKKFSSADYIRKQLE 436
                A +LG+EV  E  + +I  A       IE L+Q+RL   K K ++  D IR +L+
Sbjct: 406 TLVQLAEVLGLEVKPE--DTSIPTASGLSDQEIEDLIQQRLAARKAKNYAEGDQIRDRLK 463

Query: 437 SKGFILED 444
             G  L D
Sbjct: 464 EAGITLID 471


>gi|145635477|ref|ZP_01791177.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267242|gb|EDK07246.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 459

 Score =  312 bits (800), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 268/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV            
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVAFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE        + K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|329729466|gb|EGG65869.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 466

 Score =  312 bits (799), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 173/471 (36%), Positives = 269/471 (57%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTST-----SKGI--I 347
            V+R  M+  HYR PI++           ++R+  +  L+ +  Q +T     S+ I  I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIATDLEEQSEYIQQI 345

Query: 348 DPAV---LSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILG 393
           D  +    + + +D NT +A+ A + LA+       E+T +  +L     +++  + +LG
Sbjct: 346 DKILNQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILED 456


>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878786|sp|Q9UYV2|SYC_PYRAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 477

 Score =  312 bits (799), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 197/494 (39%), Positives = 260/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL RK  E + +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 3   IKVYNTLTRKKEELKPLRDGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHR--GF 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA QE    P       +  +  + F++D   L        PR
Sbjct: 61  TVLMVMNFTDIDDKIIKRA-QETGEDP-----GKLAERFIKVFLEDMNALKVKPADIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I  I+ +   G+AYE ++ + F+     +YG  S  KI+E + G RV     
Sbjct: 115 VTEHIDDIIEFIKKLKEKGYAYEGSDGVYFEVQKFKDYGKLSGVKIEELRKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  C     +    W+H GF+ ++G KMSKS GNF+T+ ELL+        + 
Sbjct: 235 HENEIAQSEACFGH--EWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQ-------RYS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-IDPAVLS--------- 353
             VIRL +L  HYR P+D+T + L  A+  L +   T  +  I +  A LS         
Sbjct: 286 PEVIRLFVLQKHYRSPLDYTEEGLQHAKNNLERLYNTLENIRIAMRNAELSYKWSEKDFE 345

Query: 354 --------------ALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNA 387
                         A+ +D NT  A++A+ +++    K                L  F  
Sbjct: 346 AYEAIREARKKFYDAMDDDFNTAEALKAVFEVSNAINKYILEVDKPKESILRKALEFFKV 405

Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            + + GI  +  KE         IE LV+ R  L K K+F  AD IR++L   G  LE  
Sbjct: 406 VSEVFGIFEDYFKEEKKGEEEKLIELLVEVRKQLRKEKRFDLADKIREELRKLGIQLE-- 463

Query: 446 KNPDNGQRMTRWKQ 459
              D GQ  T WK+
Sbjct: 464 ---DKGQE-TVWKR 473


>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 463

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 180/485 (37%), Positives = 267/485 (55%), Gaps = 57/485 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IVFD + + L Y   E  V
Sbjct: 1   MYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGYE--V 58

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV N TD+DDK+I+ A +    +P+      I  +  + + +D   L C      PR T
Sbjct: 59  QYVSNFTDVDDKLIKAANELGEEVPV------IAERFIKAYFEDVGSLGCTKADCHPRVT 112

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            ++ ++I  IQ +I  G+AYEA+ ++ + T S   YG  S + +DE + G R+     K+
Sbjct: 113 ENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +  DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHE
Sbjct: 173 DALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS  A   +  A  W+HNG++N++  KMSKS GNF+ +++++       +     V
Sbjct: 233 NEIAQS-EALTGKPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KEHDPQV 284

Query: 307 IRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIIDP------- 349
           +R  ML  HYR PI+++V+          RL  A   L    ++ST+    D        
Sbjct: 285 LRFFMLSVHYRHPINYSVELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIE 344

Query: 350 ----AVLSALYNDLNTVSAIQALHKLAR--------ESTKNH---DLLPIFNASAHILGI 394
               A  +A+ +D NT +AI  L  LA+        ++T  H     + +F+    +LG 
Sbjct: 345 EQRKAFQTAMDDDFNTANAISVLFDLAKHANYYLQEKNTAEHVIQAFIQLFDEICSVLGF 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            + ++ L   +   IE+L+++R    + + F+++D IR QL+S   ILED   P    + 
Sbjct: 405 SLKEQEL---LDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILED--TP----QG 455

Query: 455 TRWKQ 459
           TRWK+
Sbjct: 456 TRWKR 460


>gi|229845478|ref|ZP_04465607.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811581|gb|EEP47281.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 459

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 184/482 (38%), Positives = 268/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVERMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV            
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVAFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE        + K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
 gi|304409708|ref|ZP_07391328.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307304064|ref|ZP_07583817.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
 gi|187631634|sp|A6WLP8|SYC_SHEB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
 gi|304352226|gb|EFM16624.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912962|gb|EFN43385.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 459

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 262/483 (54%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A++ +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++   L +A   L +     T+   +D  V            
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALER---LYTAIKDVDLTVAAAPAEEFVAKF 342

Query: 353 -SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCK 398
            +A+ +D NT  A   L  + RE          +   L       A +LG+     E   
Sbjct: 343 KAAMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFF 402

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +    +  +A IE L+ ER      K +++AD  R +L   G  LED      G   T W
Sbjct: 403 QGGGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED------GPSGTTW 456

Query: 458 KQK 460
           ++K
Sbjct: 457 RKK 459


>gi|323963293|gb|EGB58857.1| cysteinyl-tRNA synthetase [Escherichia coli H489]
          Length = 461

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 272/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +       +++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------SESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|253579512|ref|ZP_04856781.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849013|gb|EES76974.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 469

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 256/482 (53%), Gaps = 61/482 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF  ++   +RMYVCGPTVY+  HIGNARPMI+FD + R + Y   E 
Sbjct: 1   MKLFNTLTRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S         I+ +   +  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGVSA------QEISERYIAECKKDMDGMNVKPATTNPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ ++  G+AY  A+  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEINGMISMIQTLVDKGYAYPAADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W SPW  GRPGWHIECS M+  YLG   DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPSWPSPWCDGRPGWHIECSVMAKKYLGDEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           IFPHHENEIAQS CC D+I   A  W+HN FLN++ RKMSKS GNF T+ E+ E      
Sbjct: 233 IFPHHENEIAQSECCNDKI--FAKYWMHNAFLNIDNRKMSKSLGNFRTVREISE------ 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDP 349
             +   V+R  ML  HYR P++F+          ++R+T+A   L      + ++   D 
Sbjct: 285 -QYDLQVLRFFMLNAHYRSPLNFSADLMEAAKNALERITDAAANLKDRKAAAQTETATDA 343

Query: 350 A-------------VLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFN 386
                            A+ +D NT  A+ A+ +L + +  N            LL    
Sbjct: 344 EKELLAQAQEFVKKFEEAMDDDFNTADALAAIFELVKFANTNVSEASSAEFAGTLLDTMV 403

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +LG++  K  E L+K     IE L+ ER    K K F+ AD IR +L +KG IL+D
Sbjct: 404 KLCDVLGLKAVKTEEILDKE----IEDLIAERQEARKAKNFARADEIRDELLAKGIILKD 459

Query: 445 YK 446
            +
Sbjct: 460 TR 461


>gi|289551670|ref|YP_003472574.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181201|gb|ADC88446.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 466

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 263/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   + 
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  +  Q F +D   L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKLIKRSQE------LNESVPEIADRYIQAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+N++  G+AYE++ ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMDHMEDIIEFIKNLVDEGYAYESHGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWSSPFGEGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIID-------- 348
            V+R  M+  HYR PI++ ++ ++ A+  L +          + + +  I++        
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVSAAKSGLERIRNSYQLIEERETIATNIVEQTDYIEQI 345

Query: 349 PAVL----SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
            A+L      + +D NT +A+ A + LA+ + K                 ++   + +LG
Sbjct: 346 DAILKQFEQVMNDDFNTANAVTAWYDLAKLANKYVLEKSTSTAVIERFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  +  +   IE+++ ER    K K F+ AD IR  L+++  ILED
Sbjct: 406 VPLKGQEADVLLDEEIEQMIAERDEARKNKDFARADEIRDTLKAQHIILED 456


>gi|237730496|ref|ZP_04560977.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906035|gb|EEH91953.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 461

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 191/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHSDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  IR  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      +AH      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGMAAHLRKLSSVLGLLEQDPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 460

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 184/481 (38%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +   S         +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANENGESC------DSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ +   +YG  SR+ +D+ + G RV  + 
Sbjct: 114 ATEYIKEIIELVETLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLDQLQAGARVEIES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSSLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGTDYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++   L +A   L +   +     I  PA            A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDISVPAAGGEDYVKRFTDA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE    K  D++       +    A ++GI         K  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKTEDVMAASALGALMRELADVIGILHQDPEAFLKGD 405

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GSEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|215485603|ref|YP_002328034.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254781678|sp|B7UKK3|SYC_ECO27 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|215263675|emb|CAS08007.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 461

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|237743811|ref|ZP_04574292.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432842|gb|EEO43054.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 472

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 278/482 (57%), Gaps = 56/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIENVSI------KEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           RAT++I +MI +IQ +I  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 RATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++ + G KMSKS G+F+ + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCACG-GTFARYWMHNGYIKINGEKMSKS-GSFVLLRDIL--KHFEGR-- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P+DF+ + L + +  L +   T                      
Sbjct: 288 ---VIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQELL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNAS------ 388
            +K  ++   + A+  D NT  A       ++A++K   E+  + + L + +        
Sbjct: 345 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKEGLEVIDEVYSYLVM 404

Query: 389 --AHILGIEV-CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  K  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 405 IIQDVLGVKLKLKVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 464

Query: 446 KN 447
           K+
Sbjct: 465 KD 466


>gi|145629045|ref|ZP_01784844.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144978548|gb|EDJ88271.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 414

 Score =  312 bits (799), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 164/385 (42%), Positives = 230/385 (59%), Gaps = 30/385 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV+           
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVVFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARESTK 377
            A+ +D NT +A+  L ++ARE  K
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINK 368


>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 494

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 183/507 (36%), Positives = 275/507 (54%), Gaps = 75/507 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I+NT   +  +   ++  +++MYVCG T YD+ HIG+AR ++VFD++YR L++  G +
Sbjct: 3   ILIHNTKTARKEKLAPLEEGHVKMYVCGITAYDYCHIGHARSVLVFDMIYRYLQHR-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TDIDDKII+RA+++          + ++ +   +F +D T L  L PT +P 
Sbjct: 62  -VTFVRNFTDIDDKIIKRAQEQ------GTTCTELSQRFIAKFHEDMTALNTLPPTLEPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+MI +I+ ++    AYEA  ++ +       YG  S R +++ + G RV    +
Sbjct: 115 ATEHLPEMIAMIEELVAKDLAYEAQGDVYYRVQRFAGYGVLSGRGLEDMQAGARVAVNDN 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM   YLG+ FDIHGGG DL+FPH
Sbjct: 175 KEHPMDFVLWKASKPGEPAWDSPWGPGRPGWHIECSAMGKKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  AN+W+H+GF+ ++  KMSKS GNF+TI E+LE         PA
Sbjct: 235 HENEIAQSEGASG-KSFANLWVHHGFVTIKDEKMSKSLGNFLTIREVLERH-------PA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVL----- 352
             +RL +  THYR P+D++   L +AE  L++         Q   + G   P+       
Sbjct: 287 EALRLFVFSTHYRNPLDYSETALQDAEAALTRIYSALAATAQLPGAAGDPSPSASVVGEK 346

Query: 353 -------------SALYNDLNTVSAI-----------------------QALHKLAREST 376
                         A+  D N+  A+                       Q L  L + + 
Sbjct: 347 DRDKLAKLEQSFHQAMDIDFNSALALGRIFDAIKIINKVRQALPANPAPQDLQLLQQTAA 406

Query: 377 KNHDLLPIFNASAH--ILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYI 431
              DL  +F  +    +  +E  ++ L   +SI    IE L+++R    + K ++ AD I
Sbjct: 407 TIRDLTAVFGLAQEEPVSWLEKRQQRLLAQLSIKPAEIEALLEQREQARRDKDWAEADRI 466

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWK 458
           R QL  +  +++D   PD     T+W+
Sbjct: 467 RDQLLQQRIVIKD--GPDG----TKWE 487


>gi|291567546|dbj|BAI89818.1| cysteinyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 486

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 188/490 (38%), Positives = 260/490 (53%), Gaps = 66/490 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  ++P  ++MY CG TVYD+ H+G+AR    +DV+ R L +   E 
Sbjct: 3   LKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA+ EH S      +  ++ +    + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRAK-EHDST-----MEEVSQRFIDAYFEDLRRLNVRDANAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
            T+HI ++  LI  +   GHAY  + ++ +     P+YG  SRR++++ +MG   RV   
Sbjct: 115 VTDHIQEIHQLIDTLTATGHAYAVDGDVYYSVGHFPDYGKLSRRQLEDLQMGASGRVAVA 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELL+     
Sbjct: 235 DLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSK-------WPQTST 342
            R     V+RL +L  HYR+P+DFT + +  A          +L ++       W   S 
Sbjct: 289 -RPVDPMVVRLFILQGHYRKPLDFTDEAIASANNGWETLKDGLLFAQQYGAPLGWSDDS- 346

Query: 343 SKGIIDPAVLS------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-------- 388
           S G  D    +      A+ +D NT   +  L +LA+E  +  +LL     +        
Sbjct: 347 SPGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTQSDRIY 406

Query: 389 ---------AHILGIEVCKE----HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQ 434
                    A + G+E   +       + IS A IE LV++R    K K ++  D IR Q
Sbjct: 407 AIWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRDQ 466

Query: 435 LESKGFILED 444
           L++ G  L D
Sbjct: 467 LQASGVTLID 476


>gi|297587609|ref|ZP_06946253.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574298|gb|EFH93018.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 462

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 180/474 (37%), Positives = 255/474 (53%), Gaps = 51/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V +V N TDIDDKII +A+ E            IT K  Q ++ + + L      T  P
Sbjct: 59  NVKFVSNFTDIDDKIINKAKDEDIDF------REITKKYIQAYLDNVSGLNFDEEDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK R    EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS  C        AN W+HN  + ++  KMSKS  NF  + ++        +
Sbjct: 233 PHHENEIAQSETCTGAHF---ANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EK 282

Query: 301 SWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            +   VIRL +L  HYR PIDF          +++RL  A+  L++  + S+ K   D  
Sbjct: 283 EFDLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLERLYTAKKFLNRILENSSEKEGSDDN 342

Query: 351 VLS-------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILG 393
           + S       A+ +D+NT  AI  L    +   KN+D             + +  +++LG
Sbjct: 343 IQSFREKFEQAMDDDINTSDAISVLFDFIKYINKNYDENTSKNILTEAKKLMDDISYVLG 402

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           I   +E  + ++   IE L+++R    K K F  AD IR +L S G +L+D ++
Sbjct: 403 ILFKEE--DDDLDSEIEDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRD 454


>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
 gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
          Length = 493

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 187/502 (37%), Positives = 269/502 (53%), Gaps = 78/502 (15%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   +  V YVR
Sbjct: 1   MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGFD--VHYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RA +        D IS+ + +  ++F+ D   L CL P+ +PR ++H+P
Sbjct: 59  NFTDVDDKIIARANELG-----EDPISL-SKRYCEEFLHDMVYLHCLPPSVEPRVSDHMP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           Q+I +I+ I+ +G+AY  + ++ F    +P YG  S RK+++ + G RV     KKNPAD
Sbjct: 113 QIIDMIERILENGYAYRIDGDVYFSVDKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPAD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   EP W+SPWG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKSAKEGEPFWDSPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 232

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC A R +   + W+HNGF+ ++  KMSKS GNF TI +++         +    +RL 
Sbjct: 233 QSCAACR-DSNISYWVHNGFVTIDSEKMSKSLGNFFTIRQVINL-------YHPLALRLF 284

Query: 311 MLMTHYREPIDFT--------------VQRLTEAEILLSKW----------PQ------- 339
           +L THYR P++++               Q L + E +LS+           P        
Sbjct: 285 LLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCENILSQHRVAFEKDAIPPDTINDINK 344

Query: 340 ------TSTSKGIIDPAVLSALYNDLNTVS----------------AIQALHKLARESTK 377
                 TS S  +  P +LSAL + L  ++                +I AL K+ R +  
Sbjct: 345 FHDTLVTSMSDDLHTPVLLSALSDPLKIINDMLHTRKGKKQIKRIESIAALEKMVRNALM 404

Query: 378 NHDLL-PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              L+ P +N +   L  +  +    K     I + ++ER +  K K +  +D IRK L 
Sbjct: 405 VLGLMPPTYNEALQQLREKALRR--AKLTEDQILQKIEERTVARKDKDYEKSDAIRKDLA 462

Query: 437 SKGFILEDYKNPDNGQRMTRWK 458
           + G  L D  +PD     T W+
Sbjct: 463 ALGIALMD--SPDG----TSWR 478


>gi|301020339|ref|ZP_07184446.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300398784|gb|EFJ82322.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 461

 Score =  312 bits (799), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMITEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|170721588|ref|YP_001749276.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229558806|sp|B1J805|SYC_PSEPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169759591|gb|ACA72907.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 460

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 255/467 (54%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPYWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDV-------YH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLS-AL 355
             V+R  ++ +HYR  I+++   L +A+  L ++       P+ +   G       S A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEEFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--------AHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  D  P   A           +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDPDAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +  A +E L+Q RL     K ++ +D IR QL + G +LED K 
Sbjct: 406 EGKVDAAEVEALIQARLQARADKNWAESDRIRDQLTAMGVVLEDSKG 452


>gi|26246536|ref|NP_752575.1| cysteinyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91209601|ref|YP_539587.1| cysteinyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117622783|ref|YP_851696.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157155754|ref|YP_001461714.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157160050|ref|YP_001457368.1| cysteinyl-tRNA synthetase [Escherichia coli HS]
 gi|162139357|ref|YP_688055.2| cysteinyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|170021093|ref|YP_001726047.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|191172271|ref|ZP_03033813.1| cysteinyl tRNA synthetase [Escherichia coli F11]
 gi|193064170|ref|ZP_03045254.1| cysteinyl tRNA synthetase [Escherichia coli E22]
 gi|193067585|ref|ZP_03048552.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
 gi|194429574|ref|ZP_03062094.1| cysteinyl tRNA synthetase [Escherichia coli B171]
 gi|194437452|ref|ZP_03069549.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
 gi|209917742|ref|YP_002291826.1| cysteinyl-tRNA synthetase [Escherichia coli SE11]
 gi|218553090|ref|YP_002386003.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218557437|ref|YP_002390350.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
 gi|218688385|ref|YP_002396597.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218693989|ref|YP_002401656.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
 gi|218698893|ref|YP_002406522.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
 gi|227884465|ref|ZP_04002270.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
 gi|237707473|ref|ZP_04537954.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|253774486|ref|YP_003037317.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160594|ref|YP_003043702.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256020497|ref|ZP_05434362.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
 gi|260842721|ref|YP_003220499.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|293408676|ref|ZP_06652515.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
 gi|293413782|ref|ZP_06656431.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
 gi|293418593|ref|ZP_06661028.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
 gi|297517317|ref|ZP_06935703.1| cysteinyl-tRNA synthetase [Escherichia coli OP50]
 gi|300819552|ref|ZP_07099746.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300820228|ref|ZP_07100380.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300903202|ref|ZP_07121133.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300919177|ref|ZP_07135707.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300925801|ref|ZP_07141656.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300929112|ref|ZP_07144605.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300940519|ref|ZP_07155089.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300987704|ref|ZP_07178317.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301049738|ref|ZP_07196683.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301301682|ref|ZP_07207817.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301327827|ref|ZP_07221017.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307314558|ref|ZP_07594160.1| cysteinyl-tRNA synthetase [Escherichia coli W]
 gi|312970621|ref|ZP_07784802.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331651486|ref|ZP_08352506.1| cysteine--tRNA ligase [Escherichia coli M718]
 gi|331656583|ref|ZP_08357545.1| cysteine--tRNA ligase [Escherichia coli TA206]
 gi|331661914|ref|ZP_08362837.1| cysteine--tRNA ligase [Escherichia coli TA143]
 gi|331666881|ref|ZP_08367755.1| cysteine--tRNA ligase [Escherichia coli TA271]
 gi|331672057|ref|ZP_08372853.1| cysteine--tRNA ligase [Escherichia coli TA280]
 gi|331676195|ref|ZP_08376907.1| cysteine--tRNA ligase [Escherichia coli H591]
 gi|331681920|ref|ZP_08382553.1| cysteine--tRNA ligase [Escherichia coli H299]
 gi|332281678|ref|ZP_08394091.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
 gi|29336539|sp|Q8FK44|SYC_ECOL6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123266145|sp|Q1RF08|SYC_ECOUT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629813|sp|A7ZIT5|SYC_ECO24 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629814|sp|A7ZXI1|SYC_ECOHS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629815|sp|A1A8J2|SYC_ECOK1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631652|sp|Q0T776|SYC_SHIF8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082063|sp|B1IZ75|SYC_ECOLC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710841|sp|B6I0H1|SYC_ECOSE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735055|sp|B7ME49|SYC_ECO45 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735056|sp|B7NL20|SYC_ECO7I RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735057|sp|B7M4M9|SYC_ECO8A RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781679|sp|B7L7F3|SYC_ECO55 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781680|sp|B7MRI9|SYC_ECO81 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|26106935|gb|AAN79119.1|AE016757_23 Cysteinyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91071175|gb|ABE06056.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Escherichia coli
           UTI89]
 gi|115511907|gb|ABI99981.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157065730|gb|ABV04985.1| cysteinyl tRNA synthetase [Escherichia coli HS]
 gi|157077784|gb|ABV17492.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169756021|gb|ACA78720.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|190907370|gb|EDV66967.1| cysteinyl tRNA synthetase [Escherichia coli F11]
 gi|192929199|gb|EDV82809.1| cysteinyl tRNA synthetase [Escherichia coli E22]
 gi|192958997|gb|EDV89433.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
 gi|194412371|gb|EDX28673.1| cysteinyl tRNA synthetase [Escherichia coli B171]
 gi|194423621|gb|EDX39611.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
 gi|209911001|dbj|BAG76075.1| cysteinyl-tRNA synthase [Escherichia coli SE11]
 gi|218350721|emb|CAU96413.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
 gi|218359858|emb|CAQ97400.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218364206|emb|CAR01871.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
 gi|218368879|emb|CAR16629.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218425949|emb|CAR06755.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
 gi|226898683|gb|EEH84942.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227838551|gb|EEJ49017.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
 gi|242376305|emb|CAQ30998.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325530|gb|ACT30132.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972495|gb|ACT38166.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976705|gb|ACT42375.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257757868|dbj|BAI29365.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|284920336|emb|CBG33396.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
 gi|291325121|gb|EFE64536.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
 gi|291433840|gb|EFF06813.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
 gi|291471854|gb|EFF14337.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
 gi|294494083|gb|ADE92839.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300298494|gb|EFJ54879.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300404775|gb|EFJ88313.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300407683|gb|EFJ91221.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300413722|gb|EFJ97032.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300418111|gb|EFK01422.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300454692|gb|EFK18185.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300462904|gb|EFK26397.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300527013|gb|EFK48082.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300527878|gb|EFK48940.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300843179|gb|EFK70939.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300845630|gb|EFK73390.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306905876|gb|EFN36399.1| cysteinyl-tRNA synthetase [Escherichia coli W]
 gi|307552429|gb|ADN45204.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307628004|gb|ADN72308.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
 gi|309700788|emb|CBJ00084.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310337270|gb|EFQ02408.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315059799|gb|ADT74126.1| cysteinyl-tRNA synthetase [Escherichia coli W]
 gi|315256355|gb|EFU36323.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315289989|gb|EFU49378.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315294314|gb|EFU53665.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315299089|gb|EFU58343.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|320180178|gb|EFW55115.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320201474|gb|EFW76054.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323160878|gb|EFZ46803.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
 gi|323170660|gb|EFZ56310.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323184846|gb|EFZ70216.1| cysteinyl-tRNA synthetase [Escherichia coli 1357]
 gi|323379632|gb|ADX51900.1| cysteinyl-tRNA synthetase [Escherichia coli KO11]
 gi|323945190|gb|EGB41250.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
 gi|323952862|gb|EGB48730.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
 gi|323958529|gb|EGB54234.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
 gi|323965083|gb|EGB60543.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
 gi|323975981|gb|EGB71074.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324006401|gb|EGB75620.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324010562|gb|EGB79781.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324019545|gb|EGB88764.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324116764|gb|EGC10678.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
 gi|327254874|gb|EGE66490.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|331050759|gb|EGI22816.1| cysteine--tRNA ligase [Escherichia coli M718]
 gi|331054831|gb|EGI26840.1| cysteine--tRNA ligase [Escherichia coli TA206]
 gi|331060336|gb|EGI32300.1| cysteine--tRNA ligase [Escherichia coli TA143]
 gi|331066105|gb|EGI37989.1| cysteine--tRNA ligase [Escherichia coli TA271]
 gi|331071046|gb|EGI42405.1| cysteine--tRNA ligase [Escherichia coli TA280]
 gi|331076253|gb|EGI47535.1| cysteine--tRNA ligase [Escherichia coli H591]
 gi|331081122|gb|EGI52287.1| cysteine--tRNA ligase [Escherichia coli H299]
 gi|332104030|gb|EGJ07376.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
 gi|332341889|gb|AEE55223.1| cysteinyl-tRNA synthetase CysS [Escherichia coli UMNK88]
 gi|332760809|gb|EGJ91097.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|333007742|gb|EGK27218.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333008207|gb|EGK27682.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333009963|gb|EGK29398.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333020797|gb|EGK40057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 461

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|256023857|ref|ZP_05437722.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|301648555|ref|ZP_07248272.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307137169|ref|ZP_07496525.1| cysteinyl-tRNA synthetase [Escherichia coli H736]
 gi|331641048|ref|ZP_08342183.1| cysteine--tRNA ligase [Escherichia coli H736]
 gi|301073390|gb|EFK88196.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315616534|gb|EFU97151.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
 gi|323972179|gb|EGB67391.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
 gi|331037846|gb|EGI10066.1| cysteine--tRNA ligase [Escherichia coli H736]
          Length = 461

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADGSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|170683319|ref|YP_001742670.1| cysteinyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|331645713|ref|ZP_08346816.1| cysteine--tRNA ligase [Escherichia coli M605]
 gi|226735059|sp|B1LKE5|SYC_ECOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|170521037|gb|ACB19215.1| cysteinyl tRNA synthetase [Escherichia coli SMS-3-5]
 gi|222032317|emb|CAP75056.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
 gi|281177699|dbj|BAI54029.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
 gi|312945102|gb|ADR25929.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|330910316|gb|EGH38826.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
 gi|331044465|gb|EGI16592.1| cysteine--tRNA ligase [Escherichia coli M605]
          Length = 461

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|16128510|ref|NP_415059.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107393|ref|AP_001173.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080109|ref|YP_001729429.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238899807|ref|YP_002925603.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
 gi|300949224|ref|ZP_07163257.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954345|ref|ZP_07166803.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301022849|ref|ZP_07186685.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|135097|sp|P21888|SYC_ECOLI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558631|sp|B1XGC4|SYC_ECODH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|259511830|sp|C4ZUX4|SYC_ECOBW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20664375|pdb|1LI5|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase
 gi|20664376|pdb|1LI5|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase
 gi|20664379|pdb|1LI7|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase With
           Cysteine Substrate Bound
 gi|20664380|pdb|1LI7|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase With
           Cysteine Substrate Bound
 gi|56966182|pdb|1U0B|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase Binary
           Complex With Trnacys
 gi|41206|emb|CAA41983.1| cysteinyl-tRNA synthetase [Escherichia coli K-12]
 gi|145692|gb|AAA23658.1| transfer RNA-Cys synthetase [Escherichia coli]
 gi|1773207|gb|AAB40279.1| cysteinyl-tRNA synthetase [Escherichia coli]
 gi|1786737|gb|AAC73628.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85674663|dbj|BAE76303.1| cysteinyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169887944|gb|ACB01651.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238860697|gb|ACR62695.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260450291|gb|ACX40713.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
 gi|299881060|gb|EFI89271.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300318682|gb|EFJ68466.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300451342|gb|EFK14962.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|315135208|dbj|BAJ42367.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
 gi|323943145|gb|EGB39302.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
 gi|227964|prf||1714234A Cys-tRNA synthetase
          Length = 461

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVAMVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|237756267|ref|ZP_04584825.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691568|gb|EEP60618.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 487

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 187/495 (37%), Positives = 262/495 (52%), Gaps = 75/495 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K  +F  I P  +++Y CG TVYD+ H+G+ R +IVFD++ R LRY     
Sbjct: 3   LKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII RA+ E   +P     S+I+ K  +++  D  +        +PR
Sbjct: 61  NVIFVRNFTDVDDKIINRAKNE--CLPF----SVISDKFIKEYFDDAEKFRIEPADVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP +I  IQ ++  G+AYEA+ ++ F       YG  S+R IDE   G R+     
Sbjct: 115 VTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK +   EP WESPWG+GRPGWH EC AM   +LG+  DIHGGGLDL FPH
Sbjct: 175 KKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  WIHNG + + G+KMSKS GN+IT+ E+          +  
Sbjct: 235 HENEIAQAEALTG-KPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KYEP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTE--------------AEILLSKWPQTSTSKGIIDPA 350
            ++RL +L  HYR P+DF+  ++ E              AE+L +K P     +G +  A
Sbjct: 287 DILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVL-NKLPIEENFEGDLYNA 345

Query: 351 V-------LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHIL 392
           V        SA+ +D NT  A+ +L  L RE     D            L  +  +A  L
Sbjct: 346 VQKAQSGFYSAMSDDFNTPEALASLFGLVREMNILRDKAIKHGGISKKALESYKEAAKTL 405

Query: 393 ------------GIEVC-----------KEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
                        ++ C           +E +N+++   I+ L++ R    K K+F+ AD
Sbjct: 406 HDIGRDIFGLFDSLQPCVKQEEIKAKEKEESINEDL---IQVLIEAREKARKDKQFAIAD 462

Query: 430 YIRKQLESKGFILED 444
            IR +L  KG ILED
Sbjct: 463 LIRDKLAEKGIILED 477


>gi|91788726|ref|YP_549678.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|122967676|sp|Q129L2|SYC_POLSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91697951|gb|ABE44780.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 462

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 180/468 (38%), Positives = 257/468 (54%), Gaps = 47/468 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R +  F  + P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+   G K
Sbjct: 3   LRIYNTLSRDVEVFSPLLPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVS-GLK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKII+RA +        + I  +T +      +D   L    PTH+PR
Sbjct: 62  -VTYVRNVTDIDDKIIKRAVEN------GETIRSLTDRMVVALHQDADALGIERPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-----ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           AT+ +PQM+ LI  +   G AY+        ++ +       YG  S + +DE + G RV
Sbjct: 115 ATDFVPQMLSLIGTLEKKGLAYQTQSGSGQGDVNYAVRKFDGYGKLSGKSLDELRAGERV 174

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K +P DF+LWK + P EP    W+SP+G GRPGWHIECSAM+   LG+ FDIHGG
Sbjct: 175 EVLDGKDDPLDFVLWKSAKPSEPDDAKWDSPYGPGRPGWHIECSAMACELLGESFDIHGG 234

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI E+L    
Sbjct: 235 GADLQFPHHENEIAQSEGA-FGKPLAGTWMHNGFVRVDNEKMSKSLGNFFTIREILA--- 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---- 352
                + A  +R  ++  HYR P++++   L +A   L +     T+  ++ PAV+    
Sbjct: 291 ----KYDAETVRFFIIRAHYRSPLNYSDAHLDDARNSLKR---LYTALDLVSPAVVAIDW 343

Query: 353 ---------SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI--EVCKE 399
                    +A+  D  T  A+  L  LA E   T++ +L  +  +    LG+       
Sbjct: 344 TNPFAARFKAAMDEDFGTPEAVAVLFDLAGEVNKTRSAELAGLLKSLGGCLGLLQSAPGS 403

Query: 400 HLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L     +   +I++L+ +R    K K F+ AD IR  L  +G +L+D
Sbjct: 404 YLQAGAGLDDASIQRLIAQRADAKKTKNFAEADRIRNDLLGQGIVLKD 451


>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 459

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 187/488 (38%), Positives = 262/488 (53%), Gaps = 62/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +   S         +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRAAENKESC------ESLTERLIGEMHRDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   HAY   N +++F  SS P YG  S + I++ + G RV  + 
Sbjct: 114 ATLHMPEIIDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-SYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
           A  IR  +L  HYR  ++++   L +A+  L +     TS   +D +V S          
Sbjct: 286 AGTIRYFLLSGHYRSQLNYSEDNLKQAKSALER---LYTSLKGLDLSVESADASEFVAKF 342

Query: 354 --ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEV------------- 396
             A+ +D NT  A   L ++ RE    K  D+     A+A  LG+++             
Sbjct: 343 KAAMDDDFNTPEAYSVLFEMVREINRVKGSDI-----AAASALGVKLKELAEVLGLLEQD 397

Query: 397 ----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                K   + +    IE L+ ER      K + +AD  R  L + G ILED      G 
Sbjct: 398 VDTFFKGEGSDDEVAQIEALIVERNRARAEKDWPAADIARDGLNALGVILED------GP 451

Query: 453 RMTRWKQK 460
             T W++K
Sbjct: 452 SGTTWRKK 459


>gi|197286005|ref|YP_002151877.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356519|ref|ZP_03840906.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|229470558|sp|B4F1M6|SYC_PROMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|194683492|emb|CAR44297.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227163275|gb|EEI48202.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 463

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 265/482 (54%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHKGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L  L P  +PR
Sbjct: 61  -VNYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALTETLIKRGHAYVAENGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVAN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNGKELGHHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  +L  HYR  +++T + L +A   L + +     +     PA         + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDANAQPAGGEAFEAQFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  LARE  +         + L  +    A +LG +E   EH  ++ 
Sbjct: 346 MNDDFNTPEAYSVLFDLAREVNRLKTVNMEAANGLAAVLRKLAKVLGLLEQQPEHFLQSG 405

Query: 406 SIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + A        IE L+Q+R    K K +++AD  R  L + G +LED      G + T W
Sbjct: 406 AQADDADEVEKIEALIQQRNDARKNKDWAAADAARDALTAMGIVLED------GPQGTTW 459

Query: 458 KQ 459
           ++
Sbjct: 460 RR 461


>gi|169824112|ref|YP_001691723.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|229558634|sp|B0S0W3|SYC_FINM2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167830917|dbj|BAG07833.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 462

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 183/474 (38%), Positives = 259/474 (54%), Gaps = 51/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V +V N TDIDDKII +A+ E      N     IT K  Q ++ + + L      T  P
Sbjct: 59  NVKFVSNFTDIDDKIINKAKDE------NIDFREITKKYIQAYLDNVSGLNFDEDDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK R    EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKTILGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS  C        AN W+HN  + ++  KMSKS  NF  + ++        +
Sbjct: 233 PHHENEIAQSETCTGAHF---ANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EK 282

Query: 301 SWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            +   VIRL +L  HYR PIDF          ++ RL  A+  L++  + S+ K   D  
Sbjct: 283 EFDLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDN 342

Query: 351 VLS-------ALYNDLNTVSAIQALHKLARESTKNHD-------LLP---IFNASAHILG 393
           + +       A+ +D+NT  AI  L    +   KN+D       LL    + +  +++LG
Sbjct: 343 IKTFREKFEQAMDDDINTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLG 402

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           I + KE  + ++   IE+L+++R    K K F  AD IR +L S G +L+D ++
Sbjct: 403 I-LFKED-DDDLDSEIEELIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRD 454


>gi|227513730|ref|ZP_03943779.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227522453|ref|ZP_03952502.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227083049|gb|EEI18361.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227090405|gb|EEI25717.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 468

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 185/476 (38%), Positives = 257/476 (53%), Gaps = 55/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  +F+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y  G K
Sbjct: 2   LQIFNTLTRKKEKFEPVTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+ H ++        I  K    F++DT  L        PR
Sbjct: 61  -VNYVSNFTDVDDKMINAARENHTTV------GAIAEKYINAFMQDTAALNISKDVTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT +IP++I  ++N+   G+AY  +  + F     P YG      +D+ ++G        
Sbjct: 114 ATQNIPEIIAFVKNLEDQGYAYNVDGNVYFRARKFPTYGELPHINVDQLEVGASQHVEKG 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK+S   E  W+SPWG+GRPGWHIECS MS  YLGK  DIHGGG DL
Sbjct: 174 EFEQKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSMKYLGKTLDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           IFPHHENE AQS  A+  +     W+HNGF+ +  +  KMSKS GNFIT+++LL  KK  
Sbjct: 234 IFPHHENERAQS-EAETHQTFVKYWMHNGFVTIGEDNEKMSKSLGNFITVHDLL--KKID 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
           G+     VIRL M  THYR PI ++   + EA+  L K                    P+
Sbjct: 291 GQ-----VIRLLMSTTHYRRPIQYSDASVQEAKSNLKKLQTAFNNSTYRLHNAEAGSDPK 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------- 388
           T      I    + A+ +D N  + I A+++LA+ S    +   +F  S           
Sbjct: 346 TEQEVRQIVADFIDAMDDDFNVQNGIAAVYELAKFSNMYSERNVVFQNSLQFIINTLKQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A I GI++ +  L  +    I  L+ ER      K F  +D IR++L+++G +LED
Sbjct: 406 AAIFGIKLEQSELKDD---EIWALIHERQQARANKDFIRSDEIREELKARGIVLED 458


>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
 gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
          Length = 532

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/509 (35%), Positives = 267/509 (52%), Gaps = 83/509 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++K+YN++ ++   F++  P  + MYVCG T YDF+H+G+AR  + FD+L+R L++   
Sbjct: 5   EELKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQHLGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN TDIDDKII RA +      I +    ++S+  ++++ D T L CL PTHQ
Sbjct: 65  E--VTYVRNFTDIDDKIIRRANE------IGEDPLSLSSRFCEEYLVDMTDLQCLIPTHQ 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T+H+ Q+  +I  II    AY    ++ F  +  PNYG  S ++++  + G RV   
Sbjct: 117 PRVTDHVEQIKDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAVD 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+ YL   FDIHGGG+DLIF
Sbjct: 177 SRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLIF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSC A   E + + W+HNG +     KMSKS GNF TI ++ E      R  
Sbjct: 237 PHHENEIAQSCAACE-ESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITE------RYH 289

Query: 303 PAPVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSKGIID 348
           P   +R  ++  HYR P++++V              Q L + E  L  + + S  +G   
Sbjct: 290 PL-ALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAGQ 348

Query: 349 PAVLSA-------------------LYNDLNT---------------------------- 361
            A L A                   + +DLNT                            
Sbjct: 349 NANLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQK 408

Query: 362 ---VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA---IEKLVQE 415
              +S I+++ ++ +E T+   +L +F        ++  K    K   +    +  L+++
Sbjct: 409 KQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIED 468

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILED 444
           R +  K + F  +D IR  L ++G  L D
Sbjct: 469 RAVARKSQDFKKSDQIRTDLSARGIALMD 497


>gi|194432744|ref|ZP_03065029.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
 gi|194419006|gb|EDX35090.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
          Length = 461

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHITEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|251799666|ref|YP_003014397.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247547292|gb|ACT04311.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 470

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 183/476 (38%), Positives = 251/476 (52%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F   +P  ++MYVCGPTVYD+ HIGNARP+I FDV+ R L Y     
Sbjct: 3   VQIYNTLTRSKEAFVPQEPGKVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLEY--AGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I++A Q   ++P       +  K    F +D   L     T  PR
Sbjct: 61  DVNYIVNFTDVDDKLIKKAEQLGLTVPE------VADKFINAFNEDIASLGVHKATLNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP +I  IQ ++  G+AY +  ++ + TS    YG  S + ++E + G R+     
Sbjct: 115 VTEHIPSIIAFIQGLVDTGYAYASEGDVYYRTSKFEEYGKLSHQNLEELQFGIRIEVGER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK   P E  WESPWG GRPGWHIECSAM+  YLG   DIHGGG DL FPH
Sbjct: 175 KENPQDFVLWKGVKPGEINWESPWGPGRPGWHIECSAMAREYLGDTLDIHGGGHDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE E+AQS      ++ AN W+HNG++++   KMSKS GN IT+NEL++  K      PA
Sbjct: 235 HECEVAQSEALTG-KQLANYWMHNGYIHINNEKMSKSLGNGITVNELVKRVK------PA 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDPAVLSAL- 355
             IR  +L THYR P++FT + + +AE  + +          + ST  G  + A    L 
Sbjct: 288 -AIRYFILSTHYRSPLNFTDETIAQAENSVDRIANCAANLKHRLSTFDGQSEGAAAGELG 346

Query: 356 --------------YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
                          +D NT  AI A+ +L  E+  N  +     +S  I  +    E +
Sbjct: 347 DRIAQLKAQFEAKMGDDFNTPDAITAVFELVTEA--NQYMNRADASSEGIAALLAALEQM 404

Query: 402 NKNISI-------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N  + +              I+ L+ ER      K ++ AD IR  L  KG  LED
Sbjct: 405 NTVLGLLPEAGTDAELLDDEIDALIVERTEARAAKNWARADEIRNLLTEKGIALED 460


>gi|262404192|ref|ZP_06080747.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349224|gb|EEY98362.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 459

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/487 (38%), Positives = 264/487 (54%), Gaps = 60/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +       ++    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------SETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLDQLQAGARVDVEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  IR  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRTVPAAGGEEYLTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
           + +D NT  A   L  +ARE    K+ DL    NASA  LG  +C+  L   I I     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDLT---NASA--LGSLMCE--LADVIGILYQEP 398

Query: 408 --------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                          IE L++ R      K +++AD  R +L   G +LED      G  
Sbjct: 399 EAFFQGGAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPN 452

Query: 454 MTRWKQK 460
            T W++K
Sbjct: 453 GTTWRRK 459


>gi|70731271|ref|YP_261012.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|109894922|sp|Q4K9S1|SYC_PSEF5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68345570|gb|AAY93176.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 460

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 178/478 (37%), Positives = 258/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +A   +T +      +D  RL    P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEAFEALTERMIAAMHEDEARLNIKKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHTMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKAAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA--------L 355
             V+R  ++ +HYR  I+++   L +A+  L ++         + PA   A        +
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAGGEAFVERFTQVM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIDAAAGLAARLKELASVLGVLQLEADDFLQAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G ILED      G+  T W+
Sbjct: 406 EGRVDGAQVEALIQARLAARANKDWAESDRIRDQITAMGVILED------GKGGTTWR 457


>gi|323191193|gb|EFZ76457.1| cysteinyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 461

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKGGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|327480668|gb|AEA83978.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 462

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 186/467 (39%), Positives = 259/467 (55%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+   + 
Sbjct: 4   LAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        +    +  +      +D TRL  L P  +PR
Sbjct: 63  -VTYVRNITDIDDKIIRRASEN------GEPFQALVERMIAAMHEDETRLNVLRPDVEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G AY   N ++ +       YG  SRRKI++ K+G R+    
Sbjct: 116 ATDHIAGMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDE 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 176 AKEDPLDFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 236 HHENEIAQSEAATG-KLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALY 356
             V+R  ++ +HYR PI+++   L EA+  L ++       P+   + G    A  +A+ 
Sbjct: 288 PEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAGGDEFVARFAAVM 347

Query: 357 -NDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIE-------VCKEH 400
            +D N+  A   L ++ RE  +  +        L       A +LG+        +    
Sbjct: 348 DDDFNSPEACAVLFEMIREVNRLRESDLTAAAALAARLKELAGVLGVLQLEPGAFLQAGA 407

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             K  +  +E L+  RL     K +  +D IR QL + G +LED K 
Sbjct: 408 AGKVDAAEVEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGKG 454


>gi|325496424|gb|EGC94283.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 461

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNQMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|239625541|ref|ZP_04668572.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519771|gb|EEQ59637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 469

 Score =  311 bits (798), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 188/492 (38%), Positives = 258/492 (52%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  + P  ++MYVCGPTVY+  HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRRKEEFVPLTPGEVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E       DA   ++ +  ++  KD   +     T  P+
Sbjct: 60  -VKYVSNFTDVDDKIIKKAIEEGV-----DA-DTVSQRYIEECKKDMAAMNVKPATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +IQ +I  GHAY A +  + F T S   YG  S + +DE + G R   V 
Sbjct: 113 ATQEICGMLEMIQTLIDKGHAYVAKDGTVYFRTGSFKEYGKLSHKNLDELQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P+DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEGKEDPSDFVLWKPKKEGEPFWESPWCNGRPGWHIECSVMSKRYLGEQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSECAND-KPFATYWMHNAFLNIDNKKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTS 343
            +   V+R  ML  HYR P++F+                 V +L + E       QT   
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTCVDKLRDLEAKAEGAAQTCAE 344

Query: 344 KGIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
           +G ++ A         A+ +D NT  AI  + +L + +    D          L      
Sbjct: 345 QGSMEEAGKLLGRFEEAMDDDFNTADAISVVFELVKLANTTADSGSTKAYVSFLKKNIEQ 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI    E   + +   IE+++  R    K K F+ AD IR +L   G +LED + 
Sbjct: 405 LCDVLGI--ITEKKEEVLDSDIEEMIAARQQARKDKDFALADEIRGKLLDMGIVLEDTRE 462

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 463 G------VKWKR 468


>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|109894945|sp|Q2NV45|SYC_SODGM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 457

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 180/477 (37%), Positives = 258/477 (54%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDI+DKII RA +        +    +T +   +   D  +L  L P  +PR
Sbjct: 61  -VNYVRNITDIEDKIIRRAAEN------GETFHQLTERMISEMHSDFDQLNILRPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I  +I L+  +I   HAY  AN +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATHYIDAIIELVGQLIDRDHAYVAANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DLIFP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N+W+H G + ++  KMSKS GNF T+ ++L       R + 
Sbjct: 234 HHENEIAQSTCA-HDGPYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVL-------RYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +     PA         ++A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIALRGTDATAVPAGGDHFVAQFIAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAHILGI-----EVCKEHLN 402
           + +D NT  A   L  +ARE  +          +       A +LG+         +   
Sbjct: 346 MDDDFNTPKAYSVLFDIAREVNRLKSEQPAAQGMAATLRQLAGVLGLLEQEPAAFLQQGA 405

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              ++ IE L+Q+R    K ++++ AD  R +L + G +LED      G + T W++
Sbjct: 406 AEDNVMIEALIQQRNDARKARQWALADEARDKLTALGIVLED------GPQGTTWRR 456


>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|229558610|sp|B0VS71|SYC_ACIBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 473

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 193/477 (40%), Positives = 268/477 (56%), Gaps = 55/477 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T +      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTMRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N WIH GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----------------STKNHDLLPIFNASAH--- 390
             +A+ +D NT  A+  L +L +E                 ST  H L  I     H   
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRH-LTNILGLVQHNVD 408

Query: 391 -ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             L  ++ +E L  +    IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 409 DFLKSDIGQEALALS-DAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464


>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 465

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 187/470 (39%), Positives = 260/470 (55%), Gaps = 45/470 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ HIG+AR ++VFDV+ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDVVQRWLRA--A 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +TS+ T+    D   L    P  +
Sbjct: 60  GYRVTYVRNITDIDDKIIRRA------VENGETIQSLTSRFTRAMNVDFDALGVERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPQDPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++   T+      D A L      
Sbjct: 288 --KFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRL-YTALKDATPDVAPLDWSEAH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI--EVCKEHLNK 403
                +A+ +D NT  A+  L +LA E   T+   L       A +LG+     +E L +
Sbjct: 345 ARRFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLKRLAGVLGLLGREPREFLQQ 404

Query: 404 NISIA---------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               A         IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 405 AAGAARAGALEPEEIEAKIAARVAAKQAKNYAEADRIRAELLEAGIALED 454


>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
 gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
          Length = 528

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 188/520 (36%), Positives = 270/520 (51%), Gaps = 95/520 (18%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++++N++ +K   F+ +    +RMYVCG T YDF+HIG+AR  + FDVLYR L++   E
Sbjct: 10  QLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYE 69

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D  +L CL PT +P
Sbjct: 70  --VEYVRNFTDIDDKIIKRANE------AGETVTSLSSRFINEFLLDMAQLQCLPPTCEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T+HI  +I LI  I+ +G AY    ++ F   + P Y S S RK+D    G+RV    
Sbjct: 122 RVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDT 181

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIFP
Sbjct: 182 RKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFP 241

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   E     W+HNGF+N + +KMSKS+ NF TI ++++        + 
Sbjct: 242 HHENELAQSRAA-YPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDL-------YH 293

Query: 304 APVIRLAMLMTHYREPID--------------FTVQRLTEAEILLSKW-------PQTST 342
              +R  ++ THYR  ++              +  Q L + E +LS++       P    
Sbjct: 294 PMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVPVPVE 353

Query: 343 SKGIID---PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            + +++      L ++ +DL T   +     L +    N +                   
Sbjct: 354 EQDMVNKHHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQQKLEQQKKKQQQQ 413

Query: 381 -----------------LLPIFNASAH------ILGI-------EVCKEHLNKNISIA-- 408
                            +  +F           ILG+       E  K+  +K +  A  
Sbjct: 414 KQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKALKRAGL 473

Query: 409 IEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILED 444
            E+L+QE    R    K K+F  +D IRKQL SKG  L D
Sbjct: 474 TEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMD 513


>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|11387140|sp|Q9KQZ9|SYC_VIBCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631647|sp|A5F763|SYC_VIBC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781697|sp|C3LNF1|SYC_VIBCM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
 gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 459

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +   +         +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENAETC------ESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE         T    L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 473

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 190/475 (40%), Positives = 267/475 (56%), Gaps = 51/475 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF   +   I +YVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII RA +        ++I  +T++      +D   L C+AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIARANEN------GESIQQLTARFIDAMNEDAADLGCVAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I  ++  G AY A+N ++ F+ S    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLS---- 353
             VIR  ++ +HYR P++F+   L EA+  LS++       Q    +  +D    S    
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARE---------STKNHDLLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E         + +   L        +ILG+      E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQAMVLYSTLRQLTNILGLVQHNVDE 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             K  + ++        IE L+Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 410 FLKSDIGQDALALSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464


>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 465

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 264/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I ++  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IANRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|15800263|ref|NP_286275.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829842|ref|NP_308615.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747790|ref|ZP_02772812.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168754640|ref|ZP_02779647.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168768489|ref|ZP_02793496.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168774602|ref|ZP_02799609.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168779029|ref|ZP_02804036.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168786387|ref|ZP_02811394.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|195936093|ref|ZP_03081475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208808572|ref|ZP_03250909.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208815777|ref|ZP_03256956.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822926|ref|ZP_03263244.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397071|ref|YP_002269179.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217324178|ref|ZP_03440262.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791714|ref|YP_003076551.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261224014|ref|ZP_05938295.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257708|ref|ZP_05950241.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281437|ref|YP_003498255.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|21264001|sp|Q8XCT9|SYC_ECO57 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710840|sp|B5YPP1|SYC_ECO5E RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|12513423|gb|AAG54883.1|AE005233_9 cysteine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13360046|dbj|BAB34011.1| cysteine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187769725|gb|EDU33569.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017727|gb|EDU55849.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189003129|gb|EDU72115.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189357976|gb|EDU76395.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189362536|gb|EDU80955.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189373672|gb|EDU92088.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|208728373|gb|EDZ77974.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208732425|gb|EDZ81113.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208737119|gb|EDZ84803.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158471|gb|ACI35904.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209777878|gb|ACI87251.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777880|gb|ACI87252.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777882|gb|ACI87253.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777884|gb|ACI87254.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777886|gb|ACI87255.1| cysteine tRNA synthetase [Escherichia coli]
 gi|217320399|gb|EEC28823.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254591114|gb|ACT70475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290761310|gb|ADD55271.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320192951|gb|EFW67591.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320638305|gb|EFX08030.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320643709|gb|EFX12839.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320649025|gb|EFX17612.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654603|gb|EFX22608.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660389|gb|EFX27860.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665083|gb|EFX32180.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326341299|gb|EGD65091.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326345924|gb|EGD69663.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 461

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|302385700|ref|YP_003821522.1| cysteinyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302196328|gb|ADL03899.1| cysteinyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 467

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 190/475 (40%), Positives = 261/475 (54%), Gaps = 53/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF +++P  I+MYVCGPTVY+  HIGNARP+IVFD + R   Y   E 
Sbjct: 1   MKIYNTLSRQKEEFVSLEPGKIKMYVCGPTVYNLIHIGNARPIIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TDIDDKII++A +E       DA + I+ +  ++  KD   L     T  P 
Sbjct: 60  -VNFVSNFTDIDDKIIKKAIEEGV-----DA-NTISKRYIEECKKDMESLNIKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +I+ +I  GHAYEA +  + F T +   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMLDMIEKLIASGHAYEAADGTVYFRTKTFGEYGKLSHKNLEDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P+DF+LWK     EP WESPW +GRPGWHIECS MS  YLG   DIH GG DL
Sbjct: 173 GEDGKEDPSDFVLWKPKKEGEPYWESPWCQGRPGWHIECSVMSKKYLGDQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  E  A  W+HNGFLN++ +KMSKS GNF T+ ++       G 
Sbjct: 233 IFPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVRDI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIID-- 348
            +   V+R  ML  HYR PI+F+          ++R+  A   L     T+T++ +++  
Sbjct: 285 KYDLQVLRFFMLSAHYRSPINFSADLMEASKNGLERILTAVDKLKSLEATATTEKLLEGE 344

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLAR--ESTKNHD--------LLPIFNASA 389
                        +A+ +D NT  AI  + +L +   ST N D        L        
Sbjct: 345 DNNSVQELVSKYEAAMDDDFNTADAISVIFELVKLSNSTANGDSSREYVTYLRDTIERLC 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGI    E   + +   IE ++  R    K K F+ AD IR +L  KG +LED
Sbjct: 405 EVLGI--ITEKEEEILDDEIEAMIAGRQQARKDKNFALADEIRGKLLEKGIVLED 457


>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 473

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 190/475 (40%), Positives = 267/475 (56%), Gaps = 51/475 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF   +   I +YVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII RA +        ++I  +T++      +D   L C+AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIARANEN------GESIQQLTARFIDAMNEDAANLGCVAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I  ++  G AY A+N ++ F+ S    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EATTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLS---- 353
             VIR  ++ +HYR P++F+   L EA+  LS++       Q    +  +D    S    
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARE---------STKNHDLLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E         + +   L        +ILG+      E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHNVDE 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             K  + ++        IE L+Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 410 FLKSDIGQDALALSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464


>gi|162139463|ref|YP_001172566.2| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|187631654|sp|A4VL73|SYC_PSEU5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 185/467 (39%), Positives = 259/467 (55%), Gaps = 40/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+   + 
Sbjct: 3   LAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        +    +  +      +D TRL  L P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIRRASEN------GEPFQALVERMIAAMHEDETRLNVLRPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G AY   N ++ +       YG  SRRKI++ K+G R+    
Sbjct: 115 ATDHIAGMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 175 AKEDPLDFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 235 HHENEIAQSEAATG-KLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA-VLSAL 355
             V+R  ++ +HYR PI+++   L EA+  L ++       P+   + G    A   +A+
Sbjct: 287 PEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAGGDEFVARFAAAM 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH--------ILGIEVCKEH------- 400
            +D N+  A   L ++ RE  +  +      A+          +LG+   +         
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLREADLAAAAALAARLKVLAGVLGVLQLEPDAFLQAGA 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             K  +  +E L+  RL     K +  +D IR QL + G +LED K 
Sbjct: 407 AGKVDAAEVEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGKG 453


>gi|303234834|ref|ZP_07321459.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302493952|gb|EFL53733.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 462

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 183/474 (38%), Positives = 258/474 (54%), Gaps = 51/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V +V N TDIDDKII +A+ E      N     IT K  Q ++ + + L      T  P
Sbjct: 59  NVKFVSNFTDIDDKIINKAKDE------NIDFREITKKYIQAYLNNVSGLNFDEDDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK R    EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS  C        AN W+HN  + ++  KMSKS  NF  + ++        +
Sbjct: 233 PHHENEIAQSETCTGAHF---ANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EK 282

Query: 301 SWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            +   VIRL +L  HYR PIDF          ++ RL  A+  L++  + S+ K   D  
Sbjct: 283 EFDLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDN 342

Query: 351 VLS-------ALYNDLNTVSAIQALHKLARESTKNHD-------LLP---IFNASAHILG 393
           + +       A+ +D+NT  AI  L    +   KN+D       LL    + +  +++LG
Sbjct: 343 IKTFREKFEQAMDDDINTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLG 402

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           I + KE  + ++   IE L+++R    K K F  AD IR +L S G +L+D ++
Sbjct: 403 I-LFKED-DDDLDSEIEDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRD 454


>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|109894925|sp|Q4FRZ9|SYC_PSYA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 488

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 185/487 (37%), Positives = 262/487 (53%), Gaps = 63/487 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ IY++L  +   F+ +    + MYVCG TVYD+ HIG+AR M+ FD+  R L     +
Sbjct: 13  QLVIYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGYD 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITDIDDKII RA +        + I  +T +      +D T L C +P  +P
Sbjct: 73  --VNYVRNITDIDDKIIARAAEN------GEEIGALTQRFITAMHEDATALGCQSPNAEP 124

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT++I +M  +I+ ++ + +AY  +N ++ +   S  +YG  S+R +D+ + G+RV  +
Sbjct: 125 RATDYIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEVE 184

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK + P EP W S WG+GRPGWHIECSAMS+  LG  FDIHGGG DL F
Sbjct: 185 NDKRNPFDFVLWKAAKPDEPQWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQF 244

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   E   N W+H GF+N++G KMSKS GNF TI +++         +
Sbjct: 245 PHHENEIAQSEAATGCEYARN-WMHVGFINVDGEKMSKSLGNFFTIRDVMA-------KY 296

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKG---IIDPAVLS-- 353
               +R  +L +HYR  ++F+   L EA   LS+  Q        KG   I+D A+++  
Sbjct: 297 LPETVRFFLLSSHYRSQVNFSDSALDEAHNSLSRLYQALKVVEQQKGQTLIVDDALINNA 356

Query: 354 -----------ALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILG 393
                      A+ +D N+ +AI  L  LAR+  K   +  I           A A  L 
Sbjct: 357 YASAPGQDFIKAMNDDFNSSTAISVLFGLARDINKASKVEDIESAWQLAQQLKALAQTLN 416

Query: 394 I--------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           I              E  ++ L      AI+ L+ ER      K F+ AD IR QL+  G
Sbjct: 417 ILQQPVQQFLQAVIGEAAEDGLTDE---AIDSLIIERADAKTNKNFARADEIRIQLKDAG 473

Query: 440 FILEDYK 446
             LED +
Sbjct: 474 IELEDSR 480


>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 460

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/481 (37%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I+   + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           +  +R  ++  HYR  ++++ + L +A   L +   +     +  PA            A
Sbjct: 286 SETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLTTPAAGGEEYVSRFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE    K  D      L  +    A ++GI         K  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRIKAEDIAAASALGSLMRELADVIGILYQDPEAFLKGD 405

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123030490|sp|Q0HTK4|SYC_SHESR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 461

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 183/480 (38%), Positives = 259/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   E 
Sbjct: 4   LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITDIDDKII+RA +        +  + +T +   +  KD   L  + P  +PR
Sbjct: 63  -VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDFEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY  A+ +++F  +S P YG  S + +++ + G RV    
Sbjct: 116 ATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDD 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 176 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 236 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
              +R  +L  HYR  I+++ + L +A   L + +         + PA          +A
Sbjct: 288 PETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAPAPAEEFVAKFKAA 347

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLPIFNAS------AHILGI------EVCKEH 400
           + +D NT  A   L  + RE    K  D+      +      A +LG+         K  
Sbjct: 348 MDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKGE 407

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W++K
Sbjct: 408 GSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED------GPSGTTWRKK 461


>gi|47569824|ref|ZP_00240494.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553517|gb|EAL11898.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 465

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 264/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+++  ILED        
Sbjct: 407 GLELAQEDL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKNRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|254724230|ref|ZP_05186015.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 465

 Score =  311 bits (797), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSIGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
           27560]
 gi|149734002|gb|EDM50121.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
           27560]
          Length = 470

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 180/476 (37%), Positives = 256/476 (53%), Gaps = 52/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K  EF  ++   ++MYVCGPTVY+  HIGNARPMI+FD   R L Y   + 
Sbjct: 1   MKIYNTLTKKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTFRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  +         I+ +  ++  KD   L     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGTTA------EEISQRYIKECKKDMHDLNIEPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I+ +I  G+AY+A+  + + T    +YG  S++ ID+ + G R   V  
Sbjct: 113 ATQEIDGMIEMIKTLIDKGYAYDADGTVYYRTRKFKDYGKLSKKNIDDLEAGHRDIKVAG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG   DIH GG DLI
Sbjct: 173 EESKEDPLDFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLGDEIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  +  W+HNGFLN+  +KMSKS GNF T+ ++ E        
Sbjct: 233 FPHHENEIAQSEAANGCE-FSKYWMHNGFLNINNKKMSKSLGNFFTVRDISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------------WPQTSTSK 344
           +   V+R  ML  HYR P++F+   +  A+  L +                    T    
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSDDLMESAKNGLERIITSGAKIRDIISNGKDGKVTDAEA 344

Query: 345 GIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
            ++D A         A+ +D NT +AI A+ +L + +  N +          +  I +  
Sbjct: 345 KLLDEAKEYITKFEEAMDDDCNTANAISAVFELVKFANSNLNEGSTKEFAAGVYEILDKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ++LGI + KE         IE+++ +R    K + F+ AD IR +L +KG +L+D
Sbjct: 405 CNVLGIILEKEEEKVGDEDYIEEMIAKRAQAKKDRDFAMADQIRDELAAKGIVLKD 460


>gi|30260280|ref|NP_842657.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525344|ref|YP_016693.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183123|ref|YP_026375.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481691|ref|YP_034442.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145127|ref|YP_081701.1| cysteinyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65317550|ref|ZP_00390509.1| COG0215: Cysteinyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165873141|ref|ZP_02217757.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635089|ref|ZP_02393406.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641949|ref|ZP_02400184.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689572|ref|ZP_02880758.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707565|ref|ZP_02898018.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655593|ref|ZP_02936974.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196041797|ref|ZP_03109087.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218901292|ref|YP_002449126.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227812763|ref|YP_002812772.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229601947|ref|YP_002864741.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684407|ref|ZP_05148267.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254733756|ref|ZP_05191471.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254756312|ref|ZP_05208341.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254758390|ref|ZP_05210417.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300119599|ref|ZP_07057143.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|33301677|sp|Q81VV1|SYC_BACAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216160|sp|Q63HB0|SYC_BACCZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216199|sp|Q6HPS8|SYC_BACHK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735045|sp|B7JK97|SYC_BACC0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765175|sp|C3P9N5|SYC_BACAA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765176|sp|C3LJ62|SYC_BACAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|30253601|gb|AAP24143.1| cysteine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500492|gb|AAT29168.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177050|gb|AAT52426.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333247|gb|AAT63893.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51978596|gb|AAU20146.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164711121|gb|EDR16682.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510080|gb|EDR85491.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529563|gb|EDR92313.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127561|gb|EDS96435.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666485|gb|EDT17262.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080057|gb|EDT65155.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196027417|gb|EDX66034.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218537598|gb|ACK89996.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227004950|gb|ACP14693.1| cysteine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229266355|gb|ACQ47992.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|298723071|gb|EFI63969.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 465

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 493

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 190/512 (37%), Positives = 260/512 (50%), Gaps = 77/512 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           KK ++IYNTL +   EF   D  ++ MYVCGPT Y+F H+GNARP++ FD + R    Y 
Sbjct: 5   KKVMEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYF-LYK 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G K V YV+N TD+DDKII RA++E    P+      + +K   ++  D   L  L    
Sbjct: 64  GFK-VKYVQNFTDVDDKIINRAKEEGMD-PL-----ALANKYINEYFVDADALNVLRADV 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            P+ + HI ++I LI+ +   GHAY  + ++ F   S P YG  S R +++ + G RV  
Sbjct: 117 HPKVSEHIKEIIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRNLEDMQAGARVEV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KK+P DF LWK + P EP WESPWG GRPGWHIECSAM+  YLG  FDIHGGG DLI
Sbjct: 177 DVRKKDPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLI 236

Query: 242 FPHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS   C    +  A  W+HNGF+ +   KMSKS GNF  + E+L+      
Sbjct: 237 FPHHENEIAQSEASCG---KPFARYWMHNGFITINQEKMSKSLGNFFLVREILD------ 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSKGII 347
             +P  V+R  +L THYR P+DF  ++L  A   L +                S  K  +
Sbjct: 288 -KFPPDVVRWFLLSTHYRSPLDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEAL 346

Query: 348 DPAVL------------SALYNDLNTVSAIQALHKLARE-------------------ST 376
           D A               A+ +D NT  AI    +L++E                     
Sbjct: 347 DAARFKGKLAALRSEFEQAMDDDFNTALAISVFFELSKEINILVGNLGGVVTPAARQLLA 406

Query: 377 KNHDLLPIFNASAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSA 428
             H L+  FN    IL  +     L        +K +   ++ +++ R      K +++A
Sbjct: 407 DAHALVKDFNYVLGILKEDQTSGRLLLEAPAKDDKLVDALVQLIIKIRQEARGKKDWATA 466

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           D IR  L+  G ILED   P       RWK++
Sbjct: 467 DAIRDGLKELGIILED--TPQG----VRWKKQ 492


>gi|260853742|ref|YP_003227633.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260866682|ref|YP_003233084.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257752391|dbj|BAI23893.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257763038|dbj|BAI34533.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323153431|gb|EFZ39686.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323178201|gb|EFZ63779.1| cysteinyl-tRNA synthetase [Escherichia coli 1180]
          Length = 461

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYIALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 469

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 193/479 (40%), Positives = 255/479 (53%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+   +RMYVCGPTVY+  HIGNARPMI FD + R   Y   E 
Sbjct: 1   MKIFNTLSRRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E       DA ++I+ +   +  KD   +  L  T  P 
Sbjct: 60  -VNYVSNFTDVDDKIINKAIEEGV-----DA-AVISQRYINECKKDMAAMNVLPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M  +I  +I  GHAY A +  + F   S  +YG  S + IDE + G R   V 
Sbjct: 113 ATQEIEGMEDMIGKLIKSGHAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++  DF+LWK     EP WESPW +GRPGWHIECS MS  YLG+  DIHGGG DL
Sbjct: 173 GEDGKEDSNDFVLWKPKKEGEPYWESPWSKGRPGWHIECSVMSKKYLGEQIDIHGGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  AN W+HN FLN++ +KMSKS GNF T+ ++ E       
Sbjct: 233 IFPHHENEIAQSESASG-KSFANYWMHNAFLNIDNKKMSKSAGNFFTVRDISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTST-----SKGIIDPAV 351
            +   V+R  ML  HYR P++F+ + +  A    E +L+      T     +   I  A 
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEAAKNSLERILTGMDNIKTVIARNNTAPITDAE 344

Query: 352 LS--------------ALYNDLNTVSAIQALHKLARES--TKNHD--------LLPIFNA 387
           LS              A+ +D NT  A+ A+ +L + S  T N +        LL +   
Sbjct: 345 LSNLEIAKVLKDKFADAMDDDFNTADAVSAIFELVKLSNTTLNENSTVEYAKGLLNVIEP 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              +LGI    E   + +   IE L+  R    K K F+ AD IR  L  KG +LED +
Sbjct: 405 LCDVLGI--ITERKTEILDSEIEDLIARRTQARKNKDFALADKIRNDLLEKGIVLEDTR 461


>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259511844|sp|C5A739|SYC_THEGJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
          Length = 476

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/480 (39%), Positives = 258/480 (53%), Gaps = 58/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 3   IRIYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEH--KGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA +        +    +  K  + F++D   L        PR
Sbjct: 61  TVLMVMNFTDIDDKIIKRANE------TGEDPKELAEKFLRIFLEDMKALKVKPADIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +I  I+ +   G+AYE ++ + F+     +YG  S+ K+++   G RV     
Sbjct: 115 VTEHMQDIISFIKKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  C     +  + W+H GFL + G KMSKS GNF+T+ ELL       + + 
Sbjct: 235 HENEIAQSEACFGH--EWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELL-------KRYN 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRL-----------TEAEILLSKW--PQT 340
             VIRL +L  HYR P+D++          ++RL           ++AEI   +W  P+ 
Sbjct: 286 PEVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMSKAEISF-RWDEPEF 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDL---LPIFN 386
              + I D       A+ +D NT  A++A+ +++          E  K   L      F 
Sbjct: 345 RAYEAIRDARKKFYEAMDDDFNTAEALKAVFEVSNAINRYLTEVEKPKESILRKAWEFFK 404

Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + G+  +  KE   +N    I  LV+ R  L K KKF  AD IR++L   G  LED
Sbjct: 405 DVGEVFGLFEDYFKEQKAENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLGIQLED 464


>gi|315659130|ref|ZP_07911995.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315495854|gb|EFU84184.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 466

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 167/471 (35%), Positives = 260/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   + 
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  +  Q F +D   L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKLIKRSQE------LNESVPEIADRYIQAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+N++  G+AYE++ ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMDHMEDIIEFIKNLVDEGYAYESHGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWSSPFGEGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA------ 350
            V+R  M+  HYR PI++ ++ ++ A+  L +          + + +  I++        
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVSAAKSGLERIRNSYQLIEERETIATNIVEQTDYIEQI 345

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                     + +D NT +A+ A + LA+ + K                 ++   + +LG
Sbjct: 346 DEILKQFEQVMNDDFNTANAVTAWYDLAKLANKYVLEKSTSTAVIERFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +  +  +   IE+++ ER    K K F+ AD IR  L+++  ILED
Sbjct: 406 VPLKGQEADVLLDEEIEQMIAERDEARKNKDFARADEIRDTLKAQHIILED 456


>gi|315127193|ref|YP_004069196.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015707|gb|ADT69045.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 459

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 175/467 (37%), Positives = 261/467 (55%), Gaps = 46/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+   + 
Sbjct: 2   VQIYNTLTRQKEEFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +        +AI+ +T + T+   +D   L  L P  +P 
Sbjct: 61  -LKYVRNITDVDDKIIKRANEN------GEAINDLTVRMTKAMHEDFDSLNMLRPDIEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +++ +I  GHAY  A+ +++FD S+   YG+ S++ +   + G+RV    
Sbjct: 114 VTGHMDEIIAMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FP
Sbjct: 174 DKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   +  N WIH G + +   KMSKS  NF T+ E+L       + + 
Sbjct: 234 HHENEIAQSCCANN-GQYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KQYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
           A  +R  ++  HYR  ++++ + L +A    S   +  T+   ++P              
Sbjct: 286 AESVRYFLISGHYRSQLNYSQENLDQAR---SSLERIYTALRGVEPVECELEGNEYVAKF 342

Query: 354 --ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
             A+ +D N+  A+  + ++A+E        S K   L  I  +   ILGI         
Sbjct: 343 RKAMNDDFNSPEALPVVFEVAKELNRVKDSDSEKAGHLAFILRSLGEILGIAQQAPEAFL 402

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   N +    IE L+ +R      K +++AD  R  L + G +LED
Sbjct: 403 QGGQNDDEVAEIEALIVKRNDARASKNWAAADEARDALNALGVVLED 449


>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 459

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE         T    L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123029526|sp|Q0HH98|SYC_SHESM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 461

 Score =  311 bits (796), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 183/480 (38%), Positives = 259/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   E 
Sbjct: 4   LKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITDIDDKII+RA +        +  + +T +   +  KD   L  + P  +PR
Sbjct: 63  -VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDFEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY  A+ +++F  +S P YG  S + +++ + G RV    
Sbjct: 116 ATLHITEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDD 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 176 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 236 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
              +R  +L  HYR  I+++ + L +A   L + +         + PA          +A
Sbjct: 288 PETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAPAPAEEFVAKFKAA 347

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLPIFNAS------AHILGI------EVCKEH 400
           + +D NT  A   L  + RE    K  D+      +      A +LG+         K  
Sbjct: 348 MDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFKGE 407

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W++K
Sbjct: 408 GSDDEVAEIEALIVERNRARVEKDWPAADVARNRLNELGVVLED------GPSGTTWRKK 461


>gi|218703810|ref|YP_002411329.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403647|ref|ZP_06647738.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298379257|ref|ZP_06989138.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300897246|ref|ZP_07115688.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|226735058|sp|B7N980|SYC_ECOLU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218430907|emb|CAR11781.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
 gi|291429500|gb|EFF02520.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298280370|gb|EFI21874.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300358974|gb|EFJ74844.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
          Length = 461

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGPGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSSVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|283834167|ref|ZP_06353908.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070317|gb|EFE08426.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 461

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHSDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  IR  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGMASHLRKLSSVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|42779170|ref|NP_976417.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|61216251|sp|Q73FB7|SYC_BACC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|42735085|gb|AAS39025.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 465

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 473

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 190/477 (39%), Positives = 267/477 (55%), Gaps = 55/477 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWN--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----------------STKNHDLLPIFNASAH--- 390
             +A+ +D NT  A+  L +L +E                 ST  H L  I     H   
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRH-LTNILGLVQHNVD 408

Query: 391 -ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             L  ++ +E L  +    IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 409 DFLKSDIGQEALTLS-DAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464


>gi|156937781|ref|YP_001435577.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|187629828|sp|A8AB68|SYC_IGNH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|156566765|gb|ABU82170.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 464

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 178/473 (37%), Positives = 263/473 (55%), Gaps = 53/473 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R++ +F+ ++P  +RMYVCGPTVYD +HIG+AR  + FD++ + LR      
Sbjct: 2   LKVFNTLTRRLEDFKPLEPPLVRMYVCGPTVYDHSHIGHARTWVAFDIIKKYLRL--KGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITDIDDKII RAR+      +  +   +    T ++ +   +L    PT  PR
Sbjct: 60  NVIHVQNITDIDDKIINRARE------LGVSWKEVADTYTNEYFELMKKLKVF-PTVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+HI  +I  +Q+++  G+AY   + + FD    P YG  S   I ++KM ++      
Sbjct: 113 VTDHIDDIIEFVQDLVDKGYAYVTQSGVYFDVDKYPYYGQLS--GIKDKKMWSQEEFVKD 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK + P EP W+SPW +GRPGWHIECS MSS YLGK FD+HGG  DLIFPH
Sbjct: 171 KKNPYDFALWKCAKPGEPWWDSPWCKGRPGWHIECSTMSSKYLGKQFDVHGGARDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS     +      W+H+G+L ++G KMSKS GN + + ++L       +S+  
Sbjct: 231 HENEIAQSEARFGVRPWVKYWLHSGYLTVKGEKMSKSLGNIVPLKDVL-------KSFEP 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLSA 354
            V+R  +   HYR  +DF+ +RL EA+  L++   T           + KG +D   + A
Sbjct: 284 EVVRYWLSSAHYRTELDFSWERLEEAKRSLTRMRMTVDELRKIVKKESPKGKLDEWEIKA 343

Query: 355 LY--------------NDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHI 391
           +Y              ND NT  A  A+ +  R   K  +         +L   N +  +
Sbjct: 344 IYEVSKIRNEFYDAMDNDFNTPEAWAAVREALRLGNKAIEEGSWEVSLAVLEFVNEADKV 403

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              EV +E +++ +   I+ LV+ R  L +MK++  ADYIR +L+  G  L D
Sbjct: 404 F--EVFEERVHEGVEPFIDLLVEVRSKLREMKQWELADYIRSKLDELGVKLLD 454


>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 459

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE         T    L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRAAKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299286|sp|Q07ZX5|SYC_SHEFN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 460

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 186/485 (38%), Positives = 260/485 (53%), Gaps = 55/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R   EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYIGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRAAEN------NESCESLTERLIAEMHQDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I ++Q ++   HAY A+N +++F  +S P YG  S + +D+ + G RV    
Sbjct: 114 ATLHIEEIIDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGARVEIDN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVL-------KHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  +L  HYR  ++++   L +A   L +    +  KG+   +D A          
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARAALERL--YTALKGLDLTVDAAPAEAFVAKFK 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV---------------- 396
           SA+ +D NT  A   L ++ RE  +   L     A A  LG+ +                
Sbjct: 344 SAMDDDFNTPEAYSVLFEMVREINR---LKTTDMAEASALGVSLKQLADVLGLISQTPEA 400

Query: 397 -CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             K   + +    IE L+ ER      K + +AD  R +L   G  LE     D G   T
Sbjct: 401 FFKGEGSDDEVAEIEALIVERNRARTEKDWPAADVARDRLNELGVELE-----DGGPSGT 455

Query: 456 RWKQK 460
            W++K
Sbjct: 456 TWRKK 460


>gi|172056119|ref|YP_001812579.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229558633|sp|B1YGS9|SYC_EXIS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171988640|gb|ACB59562.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 465

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 176/487 (36%), Positives = 264/487 (54%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN++  K   F+ ++   ++MYVCGPTVY++ HIGNARP IVFD + R   Y   + 
Sbjct: 2   IQLYNSMTGKKEPFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYFTYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A +      + +    +T +  + +  DT  L        P 
Sbjct: 61  -VKYVSNFTDVDDKIIRTANE------LGEDYHALTKRFIEAYHADTGALNVQKADIHPL 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ ++  G+AY ++ ++ F T S  +YG  S++ IDE + G R+     
Sbjct: 114 VTETMDDIIAFIEVLVKKGNAYASSGDVYFRTRSFKDYGQLSQQSIDELRSGARIEVGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W SPWG GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 174 KEDPLDFVLWKAAKPGEPAWTSPWGEGRPGWHIECSAMAKKYLGDTIDIHAGGQDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +K AN W+HNGFLN+E  KMSKS GNF+T++E ++       +   
Sbjct: 234 HENEIAQSEACNS-QKFANYWMHNGFLNIENEKMSKSLGNFLTVHEAIQ-------AVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------TSTSKGI-- 346
            V+R  ML   YR PI+++   + +A   L++  +                T+T K +  
Sbjct: 286 MVLRFFMLSVQYRHPINYSRDLIDQAANGLARIRESVANVEHRLTMTADLGTATEKWLNR 345

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
              I    ++++ +D NT +A+  L  L++E+                 L +F   + +L
Sbjct: 346 IEEIKQHFVTSMDDDFNTANAVTDLFDLSKEANLYLGEDQVAKEVLERFLAVFQELSTVL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ +  E     +   +E+L+++R    K + F+ AD IR QL  +G +LE     D  Q
Sbjct: 406 GVTLTIE--KGLLDEEVEQLIRDRDTARKERDFARADAIRDQLRDQGILLE-----DTAQ 458

Query: 453 RMTRWKQ 459
            M RWK+
Sbjct: 459 GM-RWKR 464


>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|226735042|sp|B7GWA1|SYC_ACIB3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735043|sp|B7IBU3|SYC_ACIB5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558611|sp|B0VAU1|SYC_ACIBY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 473

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 187/475 (39%), Positives = 271/475 (57%), Gaps = 51/475 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   R+  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI------E 395
             +A+ +D NT  A+  L +L +E       +  D   +  ++     +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             K  + ++        IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464


>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 459

 Score =  310 bits (795), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE         T    L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 539

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 157/396 (39%), Positives = 221/396 (55%), Gaps = 42/396 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+      ++P+ ++MYVCGPT Y++ H+GNARP++VFD++ R L+Y   E 
Sbjct: 2   IQVYNTLSRRKERLNTLEPNKVKMYVCGPTTYNYIHLGNARPLVVFDIIRRYLQYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII+R+++E  S       + +  K   ++ +D   L      + PR
Sbjct: 61  -VTYVQNFTDVDDKIIQRSQEEGKSA------AEVAGKYIDEYFRDADALGVKRADYHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HIP +I +I+ ++  G+AY    ++ +   +   YG  S R ++E   G RV     
Sbjct: 114 VSDHIPDIIRVIETLVEKGYAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVEVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG GRPGWHIECS M+  YLG+  DIHGGG DL+FPH
Sbjct: 174 KEDPMDFALWKEAKPGEPAWESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADLVFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A         W+HNGF+ +   KMSKS GNF  + E+L         +PA
Sbjct: 234 HENEIAQS-EAYSGRPFVRYWLHNGFITVNKEKMSKSLGNFFILREILS-------QYPA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------------STSK 344
            V+R  +  THYR P+DF   +L EA   L++   T                       K
Sbjct: 286 EVVRFYLGSTHYRSPLDFDNTKLEEAGRALARLNNTLRRLNEVVKNEEVEANDETRDADK 345

Query: 345 GIID------PAVLSALYNDLNTVSAIQALHKLARE 374
           G +            A+ +D NT  AI  L  +ARE
Sbjct: 346 GFVSRLHELKEKFEVAMDDDFNTAQAIGYLFDMARE 381


>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254781693|sp|B8E5F2|SYC_SHEB2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 459

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 263/483 (54%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A++ +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++   L +A   L +     T+   +D  V            
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALER---LYTAIKDVDLTVAAAPAEEFVAKF 342

Query: 353 -SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCK 398
            +A+ +D NT  A   L  + RE          +   L       A +LG+     E   
Sbjct: 343 KAAMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFF 402

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +    +  +A IE L+ ER      K +++AD  R +L   G  LED  +P      T W
Sbjct: 403 QGGGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED--SPSG----TTW 456

Query: 458 KQK 460
           ++K
Sbjct: 457 RKK 459


>gi|41203|emb|CAA39691.1| cysteine-tRNA ligase [Escherichia coli K-12]
          Length = 461

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVAMVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   + + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAAVERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|110640787|ref|YP_668515.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
 gi|123344273|sp|Q0TKB5|SYC_ECOL5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110342379|gb|ABG68616.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
          Length = 461

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 190/483 (39%), Positives = 272/483 (56%), Gaps = 50/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCA-DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQS CA D +    N W+H+G + ++  KMSKS GNF T+ ++L       + +
Sbjct: 234 HHENEIAQSTCAHDGL--YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLS 353
            A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + 
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKN 404
           A+ +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404

Query: 405 ISIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTW 458

Query: 458 KQK 460
           ++K
Sbjct: 459 RRK 461


>gi|196047745|ref|ZP_03114944.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862142|ref|YP_002747520.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|254765177|sp|C1ET19|SYC_BACC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|196021423|gb|EDX60131.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225788057|gb|ACO28274.1| cysteine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 465

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|254302121|ref|ZP_04969479.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322313|gb|EDK87563.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 473

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 183/482 (37%), Positives = 273/482 (56%), Gaps = 55/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT+++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIENVSIKE------IAERYIKAYFEDTSKINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+     + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G+KMSKS+G+FI + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCGCG-GTFARYWMHNGYININGQKMSKSSGSFILLRDIL--KHFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P++F+   L + +  L +   T                      
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENLKGTDDCQDLL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
            +K  ++   + A+  D NT  A+  + +L +   K  D + I                 
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEVNISEKGLEVINEVYSYLVM 405

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KN 447
           K+
Sbjct: 466 KD 467


>gi|206978367|ref|ZP_03239240.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957665|ref|YP_002336209.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093860|ref|YP_002527910.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
 gi|226735048|sp|B7HQS4|SYC_BACC7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765178|sp|B9IZH4|SYC_BACCQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206743428|gb|EDZ54862.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217066370|gb|ACJ80620.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237908|gb|ACM10618.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 465

 Score =  310 bits (795), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|171058353|ref|YP_001790702.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170775798|gb|ACB33937.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 457

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/463 (39%), Positives = 257/463 (55%), Gaps = 39/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+N+L R++  F++I+P ++RMYVCG T+YD  HIG+AR M+ FDV+YR LR   G +
Sbjct: 1   MRIHNSLSRELETFKSIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVYRWLRAS-GWR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   +I        +T +      +D   L    PTH+PR
Sbjct: 60  -VTYVRNITDIDDKIIRRAVERGITI------RQLTDEMIDAMHRDIGALGIERPTHEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I  +   G AY + N ++ +       YG  S + +D+ + G RV    
Sbjct: 113 ATEYIPQMLSMISTLESKGLAYRSGNGDVNYAVRRFEGYGKLSGKSLDQLRAGERVAVAD 172

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    ++SP+G GRPGWHIECSAMS   LG+ FDIHGGGLDL
Sbjct: 173 GKEDPLDFVLWKSAKPQEPDDAKYDSPYGPGRPGWHIECSAMSCALLGETFDIHGGGLDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A         W+HNGFLN++  KMSKS GNF TI ++L       +
Sbjct: 233 QFPHHENEIAQSEGA-LGHSWVPTWMHNGFLNVDNEKMSKSLGNFFTIRDVL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVL 352
           S+    +R  ML   YR P +F+   L +A   L++         + D        PA  
Sbjct: 285 SYDGETVRFFMLRVQYRSPFNFSDAGLDDARSSLTRLYTALDGVAVDDASEIDWTHPAAA 344

Query: 353 ---SALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGI--EVCKEHLNKNI 405
              +A+ +D NT  A+  L  LA E  +N D     +      +LG+  +  +  L  + 
Sbjct: 345 RFKAAMDDDFNTPIAVSVLFDLAGEVNRNKDAGTAGLLKRLGAVLGVLQQSPRTFLQGDT 404

Query: 406 S----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  I++ + ER      + F+ AD IR  L ++G  L+D
Sbjct: 405 GGLDEAHIQQQIGERQAAKAARNFAEADRIRLALAAQGITLKD 447


>gi|324324079|gb|ADY19339.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 465

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/487 (37%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|187734096|ref|YP_001879221.1| cysteinyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|229558790|sp|B2TTB3|SYC_SHIB3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187431088|gb|ACD10362.1| cysteinyl tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|320174878|gb|EFW49998.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320186200|gb|EFW60940.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332098469|gb|EGJ03435.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 461

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +    L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|294781851|ref|ZP_06747183.1| cysteine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481662|gb|EFG29431.1| cysteine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 473

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 273/483 (56%), Gaps = 57/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ I  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT ++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANAENVSIKE------IAERYIKAYFEDTAQINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
           +AT++I  MI +I++++  G+AYE+N ++ F+       YG  S++ I++ + G R+   
Sbjct: 114 KATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYKEGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKKDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRRYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++N+ G KMSKS+G+FI + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCACG-GTFARYWMHNGYININGEKMSKSSGSFILLRDIL--KYFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IRL +L +HYR+P++F+   L + +  L +   +                      
Sbjct: 289 ---IIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
            +K  ++   + A+  D NT  A+  + +L +   K  D    F+ +A            
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALD-EGNFSKTAIEVLDEVYSYLV 404

Query: 390 ----HILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILED 444
                +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D
Sbjct: 405 MIIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKD 464

Query: 445 YKN 447
            K+
Sbjct: 465 GKD 467


>gi|134094511|ref|YP_001099586.1| cysteinyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166200149|sp|A4G4M2|SYC_HERAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|133738414|emb|CAL61459.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Herminiimonas
           arsenicoxydans]
          Length = 462

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 194/486 (39%), Positives = 264/486 (54%), Gaps = 59/486 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  IDP  +RMYVCG TVYD+ HIG+AR M+VFD++ R LR    + 
Sbjct: 4   LKIYNTLAREKQLFTPIDPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGFD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + IS +T +      +D   L    P H+PR
Sbjct: 63  -VTYVRNITDIDDKIIKRAAEN------GETISQLTQRFIDAMDEDAAALGVQKPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN++PQM+ LI  +  +G AY+A + ++ +       YG  S + +D+ + G RV    
Sbjct: 116 ATNYVPQMLGLIDMLERNGLAYKAADGDVNYSVRDFAGYGKLSGKSLDDLRAGERVDVNT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK S   EP    W S WG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 176 GKHDPLDFVLWKSSKENEPEEVKWSSKWGSGRPGWHIECSAMACELLGEQFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+LE       
Sbjct: 236 QFPHHENEIAQSEGASG-HTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLE------- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQTSTSKGIID 348
            + A V+R  +L  HYR  ++++   L +A   L++             P   T    + 
Sbjct: 288 KFDAEVVRFFILRAHYRSQLNYSDAHLDDARNALTRMYTALKDVAPDHLPLDMTEAHAV- 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN----ASAHILGI--EVCKEHLN 402
              + A+ +D NT  AI  L +LA E   N +  P+        A I+G+     ++ L+
Sbjct: 347 -RFIDAMNDDFNTPLAIAVLFELANEI--NREKSPVLARQLIGLAGIVGLLQRPAQQFLH 403

Query: 403 KNISIAIEKLVQERLILLKM---------KKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             ++ A E    E LI+ ++         K F+ AD IR  L  KG ILED         
Sbjct: 404 AGLAGADE---METLIIGQIAARADAKKAKNFAEADRIRAALLEKGIILEDKPGG----- 455

Query: 454 MTRWKQ 459
           +T W++
Sbjct: 456 LTEWRR 461


>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 460

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 178/483 (36%), Positives = 265/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+   F+ I P  + MYVCG T+YD+ HIG+AR  + FD + R LR    + 
Sbjct: 2   LQIFNTLTRQKEAFKPIQPGKVGMYVCGVTIYDYCHIGHARTYVAFDTMVRYLRSQGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII RA +       N++   + ++ T+   +D   L  L P  +P 
Sbjct: 61  -VTYVRNITDVDDKIIRRAAEN------NESCEALVARFTEAMYQDFDALNLLRPDIEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +IQ ++  GHAY  +  ++ F+  +  +YG  SR+ +++ + G RV    
Sbjct: 114 VTGHMAEIIDIIQTLVNKGHAYVTDAGDVWFEVKTFDDYGKLSRQDLEQLQSGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK + P EP W SPWG GRPGWHIECSAM+  +LGKVFDIHGGG DL+FP
Sbjct: 174 SKRNPMDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H+G + +   KMSKS  NF TI E+L       + + 
Sbjct: 234 HHENEVAQSCCAHDT-NYVNYWVHSGMVQVNKEKMSKSLNNFFTIREVL-------KQYQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L +HYR  ++++ + L +A   L +    +  +G+     L           
Sbjct: 286 AESVRYFLLSSHYRSQLNYSEENLNQAHAALERL--YTALRGVTPATELNLDNDHVARFQ 343

Query: 353 SALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGI-----EVCK 398
           +A+ +D NT  A+  L  LAR         ES +   L  +      ++G+     E   
Sbjct: 344 AAMNDDFNTAEALPVLFDLARELNITKEDGESEQAAQLAGLMRYLGGVMGLLEQAPEAFL 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +    +  +A IE L++ R      K +++AD  R +L + G +LED      G   T W
Sbjct: 404 QGGGDDDEVAKIEGLIKARNDARASKDWAAADAARDELTAMGIVLED------GAGGTSW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|308275277|emb|CBX31873.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 413

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 208/333 (62%), Gaps = 18/333 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+ERK   F+ + P  + MYVCGPTVYD  HIG+AR +IVFDV+ + L     E 
Sbjct: 3   LRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA Q      +      +  +  ++F +D   L     T +P+
Sbjct: 62  -VTYVRNFTDVDDKIINRAVQ------LGIESHEVAERYIKEFYEDMDALNIKRATIEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I LI+ ++    AY  + +I +      +YG  S RK+++ + G RV     
Sbjct: 115 ATEHIDKIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEIDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK   P EP WESPWGRGRPGWHIECSAMSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KNNPFDFALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  A   EK  A  W+HNGF+N+   KMSKS GNF+ I ++L       +S+ 
Sbjct: 235 HENEIAQSEGA--FEKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDIL-------KSYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
              +RL +L  HYR PIDFT + + E+E  L K
Sbjct: 286 PDSVRLFLLSNHYRSPIDFTDKAMEESEAALDK 318


>gi|19704900|ref|NP_602395.1| cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|22257049|sp|Q8RIK9|SYC_FUSNN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19712793|gb|AAL93694.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 473

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 270/482 (56%), Gaps = 55/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            V YV+N TD+DDK+I +A  E+ SI        I  +  + + +DT+++        +P
Sbjct: 61  -VNYVQNFTDVDDKMINKANIENVSIKE------IAERYIKAYFEDTSKINLKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +IQ+++  G+AYE+N ++ F+     + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIQSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCGCG-GTFAKYWMHNGYININGEKMSKSSGSFVLLRDIL--KYFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID----- 348
              VIRL +L +HYR+P++F+   L + +  L +   T            KGI D     
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
                     + A+  D NT  A+  + +L +   K  D   I                 
Sbjct: 346 ATKKEMEAKFIEAMNEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLVM 405

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KN 447
           K+
Sbjct: 466 KD 467


>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|229558789|sp|B1KLU0|SYC_SHEWM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 459

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RNITD+DDKII+RA +   S         +T +   +  KD   L    P  +PR
Sbjct: 61  -VNFLRNITDVDDKIIKRAAENKESC------DSLTERLIGEMHKDFDSLNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ ++I +++ +I   HAY  +N +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATLHMAEIIEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 SKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHNT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS--------A 354
           A  IR  +L  HYR  ++++   L +A+  L++ +         ++PA           A
Sbjct: 286 AATIRYFLLSGHYRSQLNYSEDNLKQAKSALARLYTALKDLDLTVEPAAAENFVSKFKQA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGI------EVCKEH 400
           + +D NT  A   L  + RE    K  DL             A +LGI         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREVNRLKVTDLAQASALAVRLKELAGVLGILEQDVDSFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N      +E L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 SNDAEVAEVEALIAERNRARAEKDWPAADIARDGLNALGVILED------GPEGTTWRKK 459


>gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 465

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 179/487 (36%), Positives = 259/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYNP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIID-------- 348
            +IR  ML  HYR PI+F+ + L      L +          +  +S  + D        
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAE 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|227510715|ref|ZP_03940764.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189836|gb|EEI69903.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 468

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 183/476 (38%), Positives = 257/476 (53%), Gaps = 55/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  +F+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y  G K
Sbjct: 2   LQIFNTLTRKKEKFEPVTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+ H ++        I  K    F++DT  L        PR
Sbjct: 61  -VNYVSNFTDVDDKMINAARENHTTV------GAIAEKYINAFMQDTAALNISKDVTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT +IP++I  ++N+   G+AY  +  + F     P YG      +D+ ++G        
Sbjct: 114 ATQNIPEIIAFVKNLEDQGYAYNVDGNVYFRARKFPTYGELPHINVDQLEVGASQHVEKG 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK+S   E  W+SPWG+GRPGWHIECS MS  YLGK  DIHGGG DL
Sbjct: 174 EFEQKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSMKYLGKTLDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           IFPHHENE AQS  A+  +     W+HNGF+ +  +  KMSKS GNFIT+++LL  KK  
Sbjct: 234 IFPHHENERAQS-EAETHQTFVKYWMHNGFVTIGEDNEKMSKSLGNFITVHDLL--KKID 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
           G+     VIRL M  THYR PI ++   + EA+  L K                    P+
Sbjct: 291 GQ-----VIRLLMSTTHYRRPIQYSDASVQEAKSNLKKLQTAFNNSTYRLHNAEAGSDPK 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------- 388
           T      I    + A+ +D N  + I A+++LA+ +    +   +F  S           
Sbjct: 346 TEQEVRQIVADFIDAMDDDFNVQNGIAAVYELAKFANMYSERDVVFQNSLQFIINTLKQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A + GI++ +  L  +    I  L+ ER      K F  +D IR++L+++G +LED
Sbjct: 406 AAVFGIKLEQSELKDD---EIWALIHERQQARANKDFIRSDEIREELKARGIVLED 458


>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082075|sp|B0TLV2|SYC_SHEHH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 459

 Score =  310 bits (794), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 260/483 (53%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  +F  + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  KD   L    P ++PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCDSLTERLIAEMHKDFDSLNMARPDNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I   HAY A++ +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATQHIPEIIDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------ 351
           A  +R  +L  HYR  ++++   L +A+  L +     T+   +D +V            
Sbjct: 286 AATVRYFLLSGHYRSQLNYSEDNLKQAKAALER---IYTALKDLDLSVEAAPAQEFVAKF 342

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
            +A+ +D NT  A   L  + RE          K   L       A +LGI         
Sbjct: 343 KTAMDDDFNTPEAYSVLFDMVREINRLKATDMAKASALGVALKELADVLGILGQDVDTFF 402

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K   + +    IE L+ ER      K + +AD  R  L + G ILED      G   T W
Sbjct: 403 KGEGSDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTW 456

Query: 458 KQK 460
           ++K
Sbjct: 457 RKK 459


>gi|168798100|ref|ZP_02823107.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|189379362|gb|EDU97778.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
          Length = 461

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L  A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKHARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 460

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 262/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTDRLIGEMHVDFDSLNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----------L 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+   A             
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDSNAAPAGGEEYVTRFT 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREVNRLKTENVEKASELGALMRELADVIGILHQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GDAGDDEEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GSEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|300996966|ref|ZP_07181604.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300304371|gb|EFJ58891.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
          Length = 461

 Score =  310 bits (794), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 271/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDID+KII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDEKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|160897948|ref|YP_001563530.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|229558629|sp|A9BZ45|SYC_DELAS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160363532|gb|ABX35145.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 461

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 168/409 (41%), Positives = 237/409 (57%), Gaps = 38/409 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R +  F  I+P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR   G +
Sbjct: 3   LRIYNTLSRALEAFSPIEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRAS-GHR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    PTH+PR
Sbjct: 62  -VTYVRNITDIDDKIIRRA------VENGETIRSLTDRMIDALHQDADALGIERPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+  + ++ F     P YG  S + +DE + G RV  + 
Sbjct: 115 ATEYVPQMLSMIGRLQDKGLAYQGTDGDVNFAVRKFPGYGKLSGKSLDELQAGERVAVQD 174

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W SPWG GRPGWHIECSAM    LG+ FDIHGGG DL
Sbjct: 175 GKQDPLDFVLWKSAKPAEPEEVKWASPWGVGRPGWHIECSAMGCEMLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  + +W+HNGF+N++  KMSKS GNF TI ++L       +
Sbjct: 235 QFPHHENEIAQSEGATG-KPFSQVWMHNGFINVDNEKMSKSLGNFFTIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--- 357
            + A  +R  ++ +HYR P++++   L +A   L +     T+  ++ PA ++  +N   
Sbjct: 287 EYDAETVRFFVVRSHYRSPLNYSDVHLNDARGALKR---LYTALSLVAPAEVAVDWNHPA 343

Query: 358 ----------DLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI 394
                     D  T  A+  L +LA E   +K+ +   +  A A  LG+
Sbjct: 344 AARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSAETAGLLKALAGCLGL 392


>gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 459

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 60  NLTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE         T    L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134207|sp|Q0KCA9|SYC_RALEH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 462

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 184/464 (39%), Positives = 253/464 (54%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    E 
Sbjct: 4   LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+NITDIDDKII RA +        + I  +T++  Q   +D   L  + P H+PR
Sbjct: 63  -VTYVQNITDIDDKIIRRAAEN------GETIGELTTRFIQYMHEDAAALGVIRPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ +I  +   G AY+A++ ++ +       YG  S + +++ + G RV    
Sbjct: 116 ATDYVPQMLDMIGKLEAKGLAYQASDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVSAND 175

Query: 184 HKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK    S P E  W+S WG GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +   N+W+HNGF+ +   KMSKS GNF TI E+L       +
Sbjct: 236 QFPHHENEIAQSEGASG-KPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVL-------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
           S+ A V+R  +L  HYR P++++   L +A   L++             AV         
Sbjct: 288 SYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCAVDWDEPHARR 347

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEHL------- 401
              A+ +D NT  A+  L  LA E  +             A  LG+     H        
Sbjct: 348 FAEAMGDDFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQGGRS 407

Query: 402 NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +  IS   IE L+  R      + F+ AD IR QL   G +LED
Sbjct: 408 DDGISPEQIETLIAARKTAKVERNFAEADRIRAQLLEAGIVLED 451


>gi|301168673|emb|CBW28264.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 459

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 183/482 (37%), Positives = 267/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +P 
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV            
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVAFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE        + K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEALIKQRNKARAAKDWAAADAARNELTAMGIVLED------GPNGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|296327724|ref|ZP_06870264.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155162|gb|EFG95939.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 473

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 270/482 (56%), Gaps = 55/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            V YV+N TD+DDK+I +A  E+ SI        I  +  + + +DT+++        +P
Sbjct: 61  -VNYVQNFTDVDDKMINKANIENVSIKE------IAERYIKAYFEDTSKINLKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +IQ+++  G+AYE+N ++ F+     + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIQSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL--KYFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID----- 348
              VIRL +L +HYR+P++F+   L + +  L +   T            KGI D     
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
                     + A+  D NT  A+  + +L +   K  D   I                 
Sbjct: 346 ATKKEMEAKFIEAMNEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLVM 405

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KN 447
           K+
Sbjct: 466 KD 467


>gi|262067257|ref|ZP_06026869.1| cysteine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379031|gb|EFE86549.1| cysteine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 473

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 272/482 (56%), Gaps = 55/482 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ I  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT ++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANAENVSIKE------IAERYIKAYFEDTAQINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
           +AT++I  MI +I++++  G+AYE+N ++ F+       YG  S++ I++ + G R+   
Sbjct: 114 KATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYREGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRRYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL--KYFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P++F+   L + +  L +   +                      
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNAS------ 388
            +K  ++   + A+  D NT  A+  + +L +   K  D        + +F+        
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALDEGNFSKTAIEVFDEVYSYLVM 405

Query: 389 --AHILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KN 447
           K+
Sbjct: 466 KD 467


>gi|327438250|dbj|BAK14615.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 467

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 180/489 (36%), Positives = 263/489 (53%), Gaps = 60/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R L+Y   E 
Sbjct: 3   IQIFNSLTRQKEPFIPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYLQYAGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII+ A +      + +  S++T +    + +D T L C      PR
Sbjct: 62  -VKFVSNFTDVDDKIIKAANE------LGEETSVLTDRFIAAYFEDITALGCQKADAHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +I  I+ +I  G+AYE+  ++ + T     YG  S + ID+ K+G R+     
Sbjct: 115 VTEHMDDIIEFIKVLIDKGYAYESQGDVYYRTRKFNGYGKLSHQSIDDLKVGARIEAGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W SPWG GRPGWHIECS M+  +LG   DIH GG DL FPH
Sbjct: 175 KEDPLDFALWKAAKAGEIKWASPWGEGRPGWHIECSVMAREHLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS   +  +KT A  W+HNG++N++  KMSKS GNFI +N++        R   
Sbjct: 235 HENEIAQSEAHN--DKTFARYWMHNGYINIDNEKMSKSLGNFILVNDI--------RQQI 284

Query: 304 AP-VIRLAMLMTHYREPIDFT---------------------VQRLTEAEILLSKWPQTS 341
            P V+R  ML  HYR PI+F                        RLT +  L     Q  
Sbjct: 285 DPQVLRFFMLSVHYRNPINFAQDLVEAAKNGLDRIRTSYTNVAHRLTSSASLGDNSEQWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLA-------RESTKNHD----LLPIFNASAH 390
              G I     +A+ +D NT +A+ AL +L+        E+  + +    +L +F+   +
Sbjct: 345 EKIGQIKVDFENAMNDDFNTANAVSALFELSHIANVYLNEANTDKEVLQAILTMFDTIGN 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI +  E     +   IE L++ER    K + F+ +D IR QL     +LED +    
Sbjct: 405 VLGIHIKVEA--GLLDEEIEALIEERNQARKNRDFARSDEIRDQLLGMDIVLEDTR---- 458

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 459 --QGTRWKR 465


>gi|119897351|ref|YP_932564.1| cysteinyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|119669764|emb|CAL93677.1| CysS protein [Azoarcus sp. BH72]
          Length = 460

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 172/403 (42%), Positives = 231/403 (57%), Gaps = 32/403 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL R    F+ I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LSIHNTLSRSKEVFRPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        ++I  +T +      +D   L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAQEN------GESIRALTDRFIAAMHEDADALGVLRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++  M  LI+ +   G AY  AN+++ +       YG  S + +DE + G RV    
Sbjct: 114 ATDYVASMQSLIERLHAKGLAYVAANHDVCYAVRKFEGYGKLSGKSLDELRAGERVEVAG 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            KK+P DF+LWK +   EP    W SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL
Sbjct: 174 EKKDPLDFVLWKHAKAEEPDEAKWASPWGSGRPGWHIECSAMSSDLLGEHFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++LET      
Sbjct: 234 QFPHHENEIAQSEGA-HGHAFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLET------ 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
            + A V+R  +L  HYR P++++   L +A   L++      S      AV         
Sbjct: 287 -YDAEVVRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALRSVEAAPAAVDWTESHALR 345

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
             +A+ +D NT  A+  L +LA E  +  D  P+  A    LG
Sbjct: 346 FRAAMDDDFNTAEALAVLFELANEVNRGRD--PLLAAQLKALG 386


>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511826|sp|C3KVS3|SYC_CLOB6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
 gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 465

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 178/488 (36%), Positives = 262/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFLPLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKKANEEGTTV------KELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMKEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPEEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV--- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +            ++G+ D  +   
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEGLRDEELKYR 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 DELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNITIESSKELVKYALDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++    ++   IE+L+QER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQKSTKASLEEEIERLIQERQKARKEKDWALADKIRDDLKERGIVLED--TPQG- 459

Query: 452 QRMTRWKQ 459
               RWKQ
Sbjct: 460 ---VRWKQ 464


>gi|257784983|ref|YP_003180200.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473490|gb|ACV51609.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 493

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 187/507 (36%), Positives = 257/507 (50%), Gaps = 76/507 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT   K  EF+ ID   IRMYVCGPTVYD  HIGNAR  + FDV+ R L Y   E  V
Sbjct: 3   VYNTQTHKKEEFKPIDEGKIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLMYKGFE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+ +N+TD+DDKII+RA ++  +         ++ + +Q F+K   R   L P  +PRAT
Sbjct: 61  TFAQNLTDVDDKIIQRANEQGRTA------QEVSEEFSQAFIKQMHRFNILDPDIRPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           + I  M+ +IQ++I  G+AY   + ++ F   S  +YG  S R +D+ + G RV     K
Sbjct: 115 HEIEAMLQMIQSLIEQGYAYAVPSGDVYFSVRSDHDYGVLSGRDLDQLRAGERVEVNDEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP W SPWG GRPGWH EC AM   YLG   DIHGGG DL+FPHH
Sbjct: 175 RDPFDFALWKAAKPGEPSWSSPWGEGRPGWHSECCAMIHRYLGTPIDIHGGGSDLVFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENE AQ+ CA      AN W+H G L ++G KMSKS GNF T+ E+L+        +PA 
Sbjct: 235 ENETAQASCAWHA-PLANYWMHTGMLRVDGEKMSKSLGNFYTLKEVLD-------KYPAD 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDPAVLSA 354
            +RL ML THYR P+DF+ +RL      L +           + Q+S    + D     A
Sbjct: 287 AVRLLMLQTHYRAPLDFSFERLEGTVGTLERMKTCVANLRWAYKQSSAQHELSDADRTLA 346

Query: 355 -------------LYNDLNTVSAIQALHKLA-------RESTKNHDLLPIFNASAHI--- 391
                        + +D NT  A+ A+  L         E  +N    P+  AS  +   
Sbjct: 347 EAINIAQSEFDAQMDDDFNTAGALAAIFALVTAANTYLAEVGQNVGASPVLRASDMLCEL 406

Query: 392 ---LGIEVCKEHLNKNI-------------------SIAIEKLVQERLILLKMKKFSSAD 429
              LGI++ +     ++                     A E L+  R      K ++ AD
Sbjct: 407 TGALGIDLTQAASTSDLPEELVALAAQVAAYEGSSADEAAEVLLAARQEARSQKNWAVAD 466

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTR 456
            IR  +   G ++ED      G R+ R
Sbjct: 467 QIRDGIAELGLLIEDTA---AGARLKR 490


>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31076996|sp|Q87QJ9|SYC_VIBPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 460

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 263/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +       D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGDMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    K  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-KYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+     PA          
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDLNAAPAGGEEYVSRFT 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +   +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GNAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|251788870|ref|YP_003003591.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537491|gb|ACT06112.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 461

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        + I  +T++   +   D   L  L+P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIKRATEN------GETIEQLTNRMIGEMHTDFQALNILSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I ++I L++ +I   HAY A+N +++F   + P YG  SR+ +D+ K G RV    
Sbjct: 114 ATHYIAEIIELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLDQLKAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +   N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGD-YVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLT-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  IR  ++  HYR  +++T + L +A   L +            ++      +     A
Sbjct: 286 AETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDASASAAGGEAFERRFRDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L  +    A +LG+  C   L     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDAAAANGLAAMLRQLAGVLGLLECDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    + K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 463

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 263/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 5   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +       D   L    P  +PR
Sbjct: 64  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGDMHADFDALNMKRPDVEPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 117 ATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIET 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 177 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    K  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 237 HHENEIAQSCCAHDT-KYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 288

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+     PA          
Sbjct: 289 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDLNAAPAGGEEYVSRFT 346

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 347 AAMNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLK 406

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +   +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 407 GNAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTW 460

Query: 458 KQK 460
           ++K
Sbjct: 461 RRK 463


>gi|309797198|ref|ZP_07691594.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|308119182|gb|EFO56444.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 461

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 189/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQLRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|331090783|ref|ZP_08339630.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399891|gb|EGG79550.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 468

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 259/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  ++   ++MYVCGPTVY+  HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKVYNTLTRRKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E   +  N+    I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEE--GVSANE----ISQRYIAECKKDMEGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I ++I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMIEMISDLIDKGYAYEKNGTVYFRTRKFEEYGKLSHKNLDDLQSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWCDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++  KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWLHNAFLNIDNHKMSKSLGNFRTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDP-------- 349
           +   V+R  ML  HYR P++F+   +  +    E +L+         G++          
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAALMESSANGLERILTAVANLKHLLGVVSEENMTAEER 344

Query: 350 -----------AVLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNAS 388
                      A   A+ +D NT  AI ++  L +        +S+K +   L  +    
Sbjct: 345 EQVKETENFVRAYEEAMEDDFNTADAIASIFDLVKFANTTTSAQSSKEYLQTLYDLIVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           + +LG+ V KE   + ++  IE L++ER    K + F  AD IR +L  KG ILED +  
Sbjct: 405 SDVLGLIVEKEE--EMLAEDIEALIEERQAARKERNFQRADEIRDELLKKGIILEDTREG 462

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 463 ------VKWKK 467


>gi|225430454|ref|XP_002285478.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 491

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/500 (37%), Positives = 264/500 (52%), Gaps = 75/500 (15%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+   F+      + MYVCG T YD +HIG+AR  + FDVLYR LR+   E  V YVR
Sbjct: 1   MSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYE--VNYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RA  E    PIN     ++ +  Q+F  D T L CL P+ +P  ++H+P
Sbjct: 59  NFTDVDDKIIARA-NEMGEDPIN-----LSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           Q+I +I+ II +  AY    ++ F     P YG  S RK+++ + G RV     KKNPAD
Sbjct: 113 QIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPAD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   EP W+SPWG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIA 232

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC A + +   + WIHNGF+ ++  KMSKS GNF TI ++++        +    +RL 
Sbjct: 233 QSCAACK-QSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQVIDI-------YHPLALRLF 284

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------------------- 339
           ++ THYR PI+++  +L  A   +    Q                               
Sbjct: 285 LIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMDQDDMTKKDSVPPHILDCINKF 344

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVS----------------AIQALHKLARESTKN 378
                TS S  +  P VL+AL + L T++                ++ AL K+ R+    
Sbjct: 345 YNDFLTSMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKQELRLESLAALEKVIRDVLTI 404

Query: 379 HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             L+P   + A +L +       +K     I + ++ER +  K K++  +D IRK L + 
Sbjct: 405 LGLMPASYSEA-LLQLREKALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAV 463

Query: 439 GFILEDYKNPDNGQRMTRWK 458
           G  L D  +PD     T W+
Sbjct: 464 GIALMD--SPDG----TTWR 477


>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 484

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/506 (37%), Positives = 264/506 (52%), Gaps = 79/506 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+  RK   F+ ++   + +YVCG TVYD  HIG+AR  IVFDVL R  R    + 
Sbjct: 3   LKLYNSSIRKKEVFKPLNDGKVGLYVCGVTVYDLCHIGHARSTIVFDVLARYFRARGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TDIDDKIIERA+       +  A   +  +    F +D  +L  L    +PR
Sbjct: 62  -VTYVRNFTDIDDKIIERAKL------LKKAPKELAREFIDAFYEDMGKLGVLKADVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+++  MI + Q ++  G+AY    ++ F   S P YGS S R +++ + G+RV     
Sbjct: 115 ATDYVEDMIEMTQTLMDRGYAYTEGGDVYFSVDSYPGYGSLSGRNLEDMRAGSRVAVDDR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W SPWG GRPGWH+ECS MS+ +LG  FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFVLWKSAKPGEPQWPSPWGPGRPGWHLECSVMSNRHLGPTFDIHGGGRDLLFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS CA+  E  A  W+HNGF+ +E  KMSKS GNF+TI + L       + +  
Sbjct: 235 HENERAQSMCANDGE-FARYWVHNGFVTVESEKMSKSLGNFLTIRDAL-------KKYHP 286

Query: 305 PVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTSKGII 347
            V+RL +L  HYR P+DF+                 +QRL +   LL       TS+  +
Sbjct: 287 EVLRLFLLSKHYRSPLDFSAKDVANLQSGLVRIYRMLQRLND---LLGPGDGEKTSEDSL 343

Query: 348 DPA-------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA------------- 387
             A           + +DLNT  A+  +    RE  +  D  P  N              
Sbjct: 344 SGASGEFYEKFCEMMDDDLNTAGALGLVFDKVREMNRLMD--PDGNGAVSEKALSSLKSQ 401

Query: 388 ------SAHILGI------EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIR 432
                 +  ILG+      E  ++  + +  +    IE LV++R      K ++ +D IR
Sbjct: 402 RDQLLRAGEILGLFQQNPAEFFEQLASPSKDVNTDEIEALVKKRSQARVAKDWALSDTIR 461

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
            QL+  G +LED      G + T W+
Sbjct: 462 DQLKEMGVVLED------GPQGTTWR 481


>gi|306813010|ref|ZP_07447203.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
 gi|305853773|gb|EFM54212.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
          Length = 461

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRTPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|239825672|ref|YP_002948296.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511835|sp|C5D3P6|SYC_GEOSW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239805965|gb|ACS23030.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 466

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 186/487 (38%), Positives = 264/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   E 
Sbjct: 4   IRLYNTLTRKKELFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ AR+    +P       I  +  Q + +D T L C      PR
Sbjct: 63  -VKYVSNFTDVDDKLIKAARELGEDVPT------IAERFIQAYFEDITALGCKKADVHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE K G R+     
Sbjct: 116 VTENIDTIIEFIQTLIDRGYAYEVDGDVYYRTRKFKEYGKLSHQSIDELKAGARIEVGEK 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 176 KEDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ ++++++           
Sbjct: 236 HENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDIIQ-------QIDP 287

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIID------ 348
            V+R  ML  HYR PI+++          ++RL  +   L    Q+ST+    D      
Sbjct: 288 QVLRFFMLSVHYRHPINYSEELLESAKKGLERLKTSYFNLKHRLQSSTNLTDDDDQWLAR 347

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAREST-----KN------HDLLPIFNASAHIL 392
                 A +  + +D NT + I  L +L++++      KN      H  L  F     +L
Sbjct: 348 IQEQHEAFIREMDDDFNTANGIAVLFELSKQANLYLLEKNTSERVIHAFLREFEQLLDVL 407

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI + +    + +   IE L+Q+R    K + F+ AD IR +L++K  ILED   P    
Sbjct: 408 GITLQE---EELLDEEIEALIQKRNEARKNRNFALADQIRDELKAKNIILED--TPQG-- 460

Query: 453 RMTRWKQ 459
             TRWK+
Sbjct: 461 --TRWKR 465


>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 459

 Score =  310 bits (793), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYIADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE         T    L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDIAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 461

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 192/486 (39%), Positives = 273/486 (56%), Gaps = 56/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  +  EF+ I    I MYVCG TVYDF HIG+AR MI FDV+ R+LR+   + 
Sbjct: 2   LRIYNTLTGQKEEFKPIVEGKIGMYVCGNTVYDFCHIGHARAMISFDVISRILRHL--DY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA  E+  +P     S +T +  +   +D   L  L P  +P+
Sbjct: 60  DLTYVRNITDVDDKIIKRA-AENGELP-----SDLTERMIEAQQEDEKALGNLPPDREPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I +I+ ++  G AY++++ ++ +  S   +YG  + RK++E   G RV    
Sbjct: 114 ATEFMQEIINMIKTLVDKGFAYQSDSGDVFYRASRFTDYGKLNNRKLEEMLAGARVEVTE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF+LWK     E  W+SPWG+GRPGWHIECSAMS++ LG  FDIHGGG DL FP
Sbjct: 174 SKEHPADFVLWKPVKEGEVHWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+H G + +   KMSKS GNF TI E+L       + + 
Sbjct: 234 HHENEIAQSEAATG-KDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVL-------KLYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL------------SKWPQTSTSKGIIDPAV 351
             V+R  M+ +HYR PID++ Q L +A++ L            S+ P++S  +       
Sbjct: 286 PEVLRYLMVSSHYRSPIDYSDQSLNDAKVALERLYNALRDQSCSEIPESSDYR----TRF 341

Query: 352 LSALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNAS----AHILGIEVCK-EHLN 402
            +AL +D NT  A+  L  L R+     T++ +L     A     A +LG+     ++  
Sbjct: 342 TAALNDDFNTPVALSVLFDLVRDLNKAKTESAELAETLAAELTNLASVLGLLYQDADYFL 401

Query: 403 KNISI--------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           KN +          IEKL++ER    K K FS +D IR  L  KG  L D +        
Sbjct: 402 KNGTFDAEGISADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIELLDSREG------ 455

Query: 455 TRWKQK 460
           T W +K
Sbjct: 456 TSWTRK 461


>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68735029|sp|Q5JD45|SYC_PYRKO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 476

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 188/479 (39%), Positives = 250/479 (52%), Gaps = 56/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+  EF+ +    +RMYVCGPTVYD+ HIG+AR  I FDV+ R L +     
Sbjct: 3   IKIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVIRRYLEH--KGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA +        +    +  K  + F++D   L        PR
Sbjct: 61  TVLMVMNFTDIDDKIIKRANE------TGEDPKELAEKFLKYFLEDMKALKVKPADIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I  I+ +   G+AYE ++ + F+     +YG  S+ K+++   G RV     
Sbjct: 115 VTEHIQDIIDFIRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPH
Sbjct: 175 KKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGSDLIFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQ+  C     +    W+H GFL + G KMSKS GNF+TI E LE        + 
Sbjct: 235 HENEIAQTEACTGH--EWVRYWMHTGFLMVNGEKMSKSLGNFVTIREALE-------RYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS--------------------KWPQT--S 341
             VIRL +L  HYR P+D+T + L  A+  L                     KW +    
Sbjct: 286 PEVIRLFVLQRHYRSPLDYTEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWGEEEFE 345

Query: 342 TSKGIID--PAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDL---LPIFNA 387
             + I D       A+ +D NT  A++A+ +++          E  K   L      F  
Sbjct: 346 AYEAIRDGRKKFYDAMDDDFNTAEALKAVFEVSNAINRYLTQVEKPKESILRKAWEFFKM 405

Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + + GI  +  +E         I+ L+  R  L K +KF  AD IR +L + G  LED
Sbjct: 406 VSEVFGIFEDYFREQKAGEEEALIKLLIDVRAQLRKERKFDLADKIRDELRNLGIQLED 464


>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 460

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 263/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +       D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGDMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    K  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-KYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+     PA          
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDLNAAPAGGEEYVSRFT 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +   +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GNAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|229828827|ref|ZP_04454896.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
           14600]
 gi|229791990|gb|EEP28104.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
           14600]
          Length = 468

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 181/475 (38%), Positives = 267/475 (56%), Gaps = 52/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF  I+P  ++MYVCGPTVY++ HIGNARPMIVFD   R + Y   + 
Sbjct: 1   MRIFNTLTRRKEEFVPIEPGKVKMYVCGPTVYNYIHIGNARPMIVFDTFRRYMEYRGYQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII++A++E       DA S I+ +   +  KD   L     +  PR
Sbjct: 60  -VTYVSNFTDVDDKIIKKAKEEG-----KDA-SEISERYIAECQKDMEALNVRPASVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I +M++++ ++I  G+AY   +  + + T +  +YG  S + I++ + G R  +  
Sbjct: 113 ATREIGEMVHMVSDLIDKGYAYPVEDGTVYYKTRAFHSYGKLSHKNIEDLEGGHRDIKVT 172

Query: 184 H--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W+SPW +GRPGWHIECS MS  YLG   DIH GG DLI
Sbjct: 173 GELKRDPLDFVLWKPKKEGEPYWDSPWCQGRPGWHIECSCMSKRYLGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+ +E  A  W+HNGFLN++ RKMSKS GNF T+ E+   +K+ G+ 
Sbjct: 233 FPHHENEIAQSEAANGVE-FARYWMHNGFLNIDHRKMSKSLGNFFTVREV--CQKYSGQ- 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------DP 349
               V+R  ML  HYR P++F+   +  A++ L +      +   +            + 
Sbjct: 289 ----VLRFFMLSAHYRSPLNFSADLMEAAKVSLERILTAGENLRFLAENARIDRMSEEER 344

Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLAR------ESTKNHDLLPIFNASAHIL 392
            +L+           A+ +D NT  A+ A+ +L +          + +L   F      L
Sbjct: 345 KILADSDQYMDKFNGAMDDDCNTADALAAIFELVKFINSRAAGQISRELADQFYQRLDTL 404

Query: 393 GIEVCKEHLNK---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +VC   L++   N+   I+ L++ER    + K F+ AD IR  L ++G +LED
Sbjct: 405 -TQVCGLILDQKEDNLDAEIDSLIEERQEARRQKDFARADRIRDDLLARGIVLED 458


>gi|152969054|ref|YP_001334163.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206578467|ref|YP_002239997.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|262041635|ref|ZP_06014829.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|288936751|ref|YP_003440810.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|187629829|sp|A6T5R2|SYC_KLEP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710845|sp|B5Y0K6|SYC_KLEP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150953903|gb|ABR75933.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206567525|gb|ACI09301.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|259041024|gb|EEW42101.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|288891460|gb|ADC59778.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 461

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 269/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  IR  ++  HYR  ++++ + L +A   L + +     +   +D A         + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILGI--EVCKEHLNKN 404
           + +D NT  A   L  +ARE    K  D       +AH      +LG+  +  +  L   
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405

Query: 405 ISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDAEVAEIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|157369409|ref|YP_001477398.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|187631631|sp|A8GAY0|SYC_SERP5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157321173|gb|ABV40270.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 461

 Score =  310 bits (793), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 180/482 (37%), Positives = 254/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII RA +        ++   +T++   +   D   L    P  +PR
Sbjct: 60  SLNYVRNVTDVDDKIIRRATEN------GESCDQLTTRMLAEMHADFDSLLIERPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +++ + Q +I  GHAY A+N +++F   S P YG  SR+ +D+ + G RV    
Sbjct: 114 ATQHIAEIVEITQRLIDRGHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCA-HDGPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLGY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                  + +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDVNAQPAGGEVFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A  AL  LARE         T  + L       A +LG+   +  L     
Sbjct: 346 MDDDFNTPEAYSALFDLAREVNRLKAEDLTAANGLAAELRKLAKVLGLLQQEPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    K K ++ AD  R +L     +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIKQRNDARKAKDWALADAARDRLNEMNIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|187631665|sp|A3M419|SYC_ACIBT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558609|sp|B2HX34|SYC_ACIBC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
 gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 473

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 187/475 (39%), Positives = 271/475 (57%), Gaps = 51/475 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+++ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI------E 395
             +A+ +D NT  A+  L +L +E       +  D   +  ++     +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             K  + ++        IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 464


>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 485

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 189/492 (38%), Positives = 263/492 (53%), Gaps = 73/492 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--YYGEK 64
           IYNTL R   +F  ++P  +RMYVCG T YD+ HIG+AR  +VFDVL R LRY  Y+   
Sbjct: 3   IYNTLHRAKEKFVPLEPGKVRMYVCGITAYDYCHIGHARSCVVFDVLVRYLRYLGYH--- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V++VRN TD+DDKII+RA +E      +D ++    K  + F  D   L  L    +PR
Sbjct: 60  -VSFVRNFTDVDDKIIKRAEEEGLD---SDQVA---EKYIEAFYLDMDELNVLKADVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI + ++++  G AY  +  +I F    +P YG  S R I+E + G+R+    
Sbjct: 113 ATRHIEEMIQVTKSLLDKGFAYITSGKDIYFRVRRMPRYGQLSGRNIEELQSGSRIAPDE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH+EC+AMS  YLG  FDIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKTAKPGEPSWDSPWGAGRPGWHLECTAMSEKYLGIPFDIHGGGQDLAFP 232

Query: 244 HHENEIAQSCCA-DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENE AQS  A DR  +    W+HNGF+ ++  KMSKS GNFITI +++  K F G   
Sbjct: 233 HHENEKAQSEAAFDR--EFVKYWVHNGFVRVDSEKMSKSLGNFITIRDIM--KDFHGE-- 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--WPQTST---------SKGIIDPAV 351
              V+R  +L  HYR P+D++   L E E  L +  W +T           SKG   P  
Sbjct: 287 ---VLRFFLLTKHYRSPLDYSDGSLEETEKALKRVYWAKTGLQKELQKEKWSKGQGFPEA 343

Query: 352 L-----------SALYNDLNTVSAIQALHKLAR--------------ESTKN--HDLLPI 384
                        A+ +DLNT  A+  +  L R              E+ K     +L +
Sbjct: 344 SQELQDLASKWDQAMQDDLNTAEAVGYVFGLVRLANRMLEDKTFRKSEAGKEIIQQMLGM 403

Query: 385 FNASAHILGI-EVCKEHLNKNISI-----------AIEKLVQERLILLKMKKFSSADYIR 432
                  LG+ +   E   + + +            ++++V +R    K K F +AD IR
Sbjct: 404 LEGWGDALGVFQRSGEEFLEQLKLMRCNRLDIDPQTVQEMVLKRQQARKDKDFETADNIR 463

Query: 433 KQLESKGFILED 444
           ++L +KG  + D
Sbjct: 464 EELTAKGIEVMD 475


>gi|170767865|ref|ZP_02902318.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
 gi|170123353|gb|EDS92284.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
          Length = 461

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L    P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVERMIAEMHKDFDALNIQRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLASVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|241662706|ref|YP_002981066.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864733|gb|ACS62394.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 463

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 184/468 (39%), Positives = 265/468 (56%), Gaps = 43/468 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + +S +T +      +D   L    P ++
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETMSALTGRFIAAMHEDADALGVQRPDYE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLGMIGKLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG+ FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHHENEIAQS  A    KT  N W+HNGF+ +   KMSKS GNF TI ++L+    
Sbjct: 234 DLQFPHHENEIAQSEGA--TGKTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKV--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA 350
               + A V+R  +L +HYR  ++++   L +A   L++        P  + +K   + +
Sbjct: 289 ----YDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNES 344

Query: 351 ----VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH--LN 402
                L A+ +D NT  A+  L +LA E   T++ +L     A A +LG+     H  L 
Sbjct: 345 HGKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVLGLLGRDPHAFLQ 404

Query: 403 KNIS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +S        +E  ++ER      + F+ AD IR  L + G +LED
Sbjct: 405 GGVSPDGLDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLED 452


>gi|117927293|ref|YP_871844.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|166200127|sp|A0LQZ8|SYC_ACIC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117647756|gb|ABK51858.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 469

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 178/472 (37%), Positives = 252/472 (53%), Gaps = 52/472 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R + EFQ  DP  + MYVCG TV    HIG+ R  +VFDVL R L  +  + 
Sbjct: 3   LRLHDTRSRGLREFQPADPPRVTMYVCGATVQAPPHIGHLRSGLVFDVLVRWLAVHGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN+TDIDDKI+  A  E   IP       +  +N + F      L C+ PT +P 
Sbjct: 62  -VVFCRNVTDIDDKILRVAAAE--GIPWWQ----VAYRNYRLFDSAYRLLGCVPPTVEPW 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIPQ+I LI+ +I  GHAY A  ++ F   S P YG  S R  D  + G    +  H
Sbjct: 115 ATGHIPQIIALIRRLIDAGHAYPAGGDVYFAVRSFPAYGGLSGRDPDALQAGES--DGVH 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG GRPGWHIECSAMS+ YLG  FDIHGGGLDL+FPH
Sbjct: 173 KRDPLDFALWKGAKPGEPSWESPWGPGRPGWHIECSAMSTTYLGSTFDIHGGGLDLLFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS  A   +  A  W+HNG + L G KMSKS GN +++++LLE  +        
Sbjct: 233 HENECAQSQAAG--DGFARYWLHNGLVTLRGEKMSKSLGNVLSMDQLLELVR-------- 282

Query: 305 PV-IRLAMLMTHYREPIDFTVQR--------------LTEAEILLSKWPQTSTSKGIID- 348
           P+ +R  ++  HYR  +DF+ +               L  A+ L+ + P      G+ID 
Sbjct: 283 PIELRYYLIGAHYRSTLDFSEESLEEAAAAYRRIEGFLLRAQELVGELPAADPQTGLIDR 342

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARES---------TKNHDLLPIFNASAHILGIEVC 397
             P  ++AL +DL    A+  +H + R+          T     L    A   ++G+   
Sbjct: 343 LPPEFVAALDDDLAVPRALAVMHSVVRQGNAALAETDKTAVRRFLGEVTAMLDVMGLRPP 402

Query: 398 KEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +      L + +      ++ ER    + + F++AD +R +L   G ++ED
Sbjct: 403 DDGSRLDALRRVVDNLARLVLDEREAARQRRDFATADALRARLTDAGIVVED 454


>gi|237738879|ref|ZP_04569360.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423982|gb|EEO39029.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 473

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 272/483 (56%), Gaps = 57/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ I  + + MYVCGPTVY++ HIGNARP I FD + R L Y  G K
Sbjct: 2   IKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            VTYV+N TD+DDK+I +A  E+ SI        I  +  + + +DT ++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANAENVSIKE------IAERYIKAYFEDTAQINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
           +AT++I  MI +I++++  G+AYE+N ++ F+       YG  S++ I++ + G R+   
Sbjct: 114 KATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYKEGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKKDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L  K F GR  
Sbjct: 234 PHHENEMAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL--KHFEGR-- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P++F+   L + +  L +   +                      
Sbjct: 289 ---VIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
            +K  ++   + A+  D NT  A+  + +L +   K  D    F+ +A            
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALD-EENFSKTAIEVLDEVYSYLV 404

Query: 390 ----HILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILED 444
                +LG+++  E    NIS  + +L+ E R    + K ++ +D IR +L   G  ++D
Sbjct: 405 MIIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKD 464

Query: 445 YKN 447
            K+
Sbjct: 465 GKD 467


>gi|290510194|ref|ZP_06549564.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289776910|gb|EFD84908.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 461

 Score =  309 bits (792), Expect = 5e-82,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 269/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  IR  ++  HYR  ++++ + L +A   L + +     +   +D A         + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILGI--EVCKEHLNKN 404
           + +D NT  A   L  +ARE    K  D       +AH      +LG+  +  +  L   
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405

Query: 405 ISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDAEVAEIESLIQQRLNARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|186476148|ref|YP_001857618.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184192607|gb|ACC70572.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 465

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 181/472 (38%), Positives = 255/472 (54%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQNFVPLHEGEVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 61  YK-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIAALHEDADALGIERPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  +PQM+ +I+ +  +G+AY+A + ++ +      NYG+ S + +++ + G RV  
Sbjct: 114 PRATEFVPQMLGMIEKLEANGYAYQAADGDVNYAVRKFENYGALSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK+S P EP   GWES +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQSKPDEPADTGWESKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A R +   N W+HNG++ ++  KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEGATR-QTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------ 348
              + A V+R  +   HYR P++++   L +A   L++       T    G +D      
Sbjct: 288 --KYDAEVVRFFIARAHYRSPLNYSDVHLDDARGALARLYTALKDTPPQAGEVDWNEAYA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------------HIL 392
               +A+ +D NT  A+  L +L  E  +  D                            
Sbjct: 346 QRFRAAMNDDFNTPVAVSVLFELVSEVNRTRDAALARQLHGLGLVLGLLGREPRVYLQQA 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G  V +  L+   + AIE  +  R+   + K ++ AD IRK+L   G  LED
Sbjct: 406 GASVGEGALD---TAAIEAKIAARVAAKQAKDYAEADRIRKELLDAGIALED 454


>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 487

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 172/409 (42%), Positives = 236/409 (57%), Gaps = 38/409 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+    Q ++  ++++YVCG T YD+ HIG+AR  +VFD++ R LR+  G K
Sbjct: 3   IRIYNTLSRRKEILQPLEEGHVKLYVCGITSYDYCHIGHARSALVFDMVVRYLRHR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TDIDDKII RA ++     I+ A   +   N  +F  D   L  L P  +P+
Sbjct: 62  -VTFVRNFTDIDDKIINRANEQ----GIDSASLALRFIN--EFYTDMDALGTLRPDLEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+MI LI+++I  G AY A+ ++ F       YG  S R + + + G RV     
Sbjct: 115 ATEHIPEMIGLIEDLIDKGMAYPADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVNDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KEHPMDFVLWKAAKPGEPKWPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSC A   +  AN+W+H+GF+ ++  KMSKS GNF+TI ++L       + +  
Sbjct: 235 HENEIAQSCGASG-KPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDVL-------KQYEP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGII----DPA 350
            V+RL +  T YR P+DFT          ++R+ E    +   P   T    +    D  
Sbjct: 287 EVLRLFIFSTQYRNPLDFTETALHDARAGLERMYECLAQVEDLPAEGTEGASVITDKDRT 346

Query: 351 VLSALY--------NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            L++L         ND NT  A+  L    +   K    LP   A+A +
Sbjct: 347 ALASLVDRFHQAMDNDFNTAQALAHLFDTVKLLNKVLRTLPERPAAADL 395


>gi|157146856|ref|YP_001454175.1| cysteinyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157084061|gb|ABV13739.1| hypothetical protein CKO_02631 [Citrobacter koseri ATCC BAA-895]
          Length = 461

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 60  TLKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + PNYG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKHNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K+ D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANAMASHLRKISGVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGELAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|56749448|sp|Q7MLR5|SYC_VIBVY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 460

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 264/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ +    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----------L 352
           A  +R  ++  HYR  ++++ + L +A   L +    ++ +G+   A             
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERL--YTSLRGLDFSAAPAGGEEYVSRFT 343

Query: 353 SALYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE    K  DL        +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED   PD     T W
Sbjct: 404 GDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED--GPDG----TTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|61216190|sp|Q6AJ23|SYC_DESPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 489

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 187/490 (38%), Positives = 263/490 (53%), Gaps = 66/490 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL  K    Q I+P+++++YVCG T YD+ HIG+AR  + FD++ R LRY   + 
Sbjct: 3   IRVYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYL--DY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TDIDDKII RA +   +         +  +   +F  D   L  L P  +P+
Sbjct: 61  KVTFVRNFTDIDDKIIARANETGVTA------QALAERFIDEFHTDMDNLGTLRPDIEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +IQ ++    AY +  ++ +  +S P YG  S R I++ + G R+     
Sbjct: 115 ATEHIQEMIDIIQELVDKDMAYPSAGDVYYVVNSFPEYGKLSGRNIEDMQAGARISINEQ 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK S P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLIFPH
Sbjct: 175 KRNPMDFALWKASKPGEPSWESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  AN WIH+GF+ ++  KMSKS GNF+TI ++L+        +  
Sbjct: 235 HENEIAQSEGANG-KPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDILD-------HYHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGI-IDPAVLSA---- 354
            ++R  +  T YR P+DF+   + +AE  L +  +        +KG    PA++SA    
Sbjct: 287 EILRAFIFSTQYRNPLDFSEIAMQDAETALVRLYECLHDIQQLAKGDPTLPALISAKDAA 346

Query: 355 ------------LYNDLNTV-------SAIQALHKLARESTKNHDLLPI---------FN 386
                       + ND NT         AI+ +++  R  T     L +           
Sbjct: 347 KLNSIETRFQEAMNNDFNTALALGVLYDAIKIINRAQRALTDTPSALDVKMLKGSMTLIQ 406

Query: 387 ASAHILGI---------EVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQ 434
             A I+G+         +  KE +   I I    IE  +Q+RL     K ++ +D IR  
Sbjct: 407 KLAGIVGLLQEDANLFLQQRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIRDI 466

Query: 435 LESKGFILED 444
           L  KG  L+D
Sbjct: 467 LLEKGITLKD 476


>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
 gi|187631633|sp|A3D302|SYC_SHEB5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 459

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 185/483 (38%), Positives = 260/483 (53%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A++ +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA--------- 354
           A  +R  +L  HYR  ++++   L +A   L +     T+   +D  V +A         
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALER---LYTAIKDVDLTVAAAPAEEFVAKF 342

Query: 355 ---LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-----EVCK 398
              + +D NT  A   L  + RE          +   L       A +LG+     E   
Sbjct: 343 KAAMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFF 402

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +       +A IE L+ ER      K +++AD  R  L   G  LED      G   T W
Sbjct: 403 QGGGSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELED------GPSGTTW 456

Query: 458 KQK 460
           ++K
Sbjct: 457 RKK 459


>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|187629841|sp|A4SX62|SYC_POLSQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 473

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 190/476 (39%), Positives = 257/476 (53%), Gaps = 51/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+ I P  ++MYVCG TVYDF HIG+AR MIVFD++ R LR    E 
Sbjct: 2   LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +       ++ IS +T++       D+  L  + P  +PR
Sbjct: 61  -VQYVRNITDIDDKIIKRALEN------SEPISALTNRFIAAMHADSDELGLMHPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I QM  +I  +I +  AY+  + ++ F    +P YG  S + +DE   G RV    
Sbjct: 114 ATDYIQQMQGMIGKLIENELAYQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGG 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W SPWG GRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 174 GKRDPLDFVLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCA----DRIEKTA---NIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            FPHHENEIAQS  A    +R E  A   N W+HNG + +   KMSKS GNF  I ++L 
Sbjct: 234 QFPHHENEIAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVL- 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL- 352
                 +S+   V+R  ML  HYR PI+++  +L EA   L++     T    +D   + 
Sbjct: 293 ------KSFDPEVVRFFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEVDTVPID 346

Query: 353 ----------SALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILG- 393
                      A+ +D NT  AI  L  LA E  +           LL     + + L  
Sbjct: 347 LQNPWAKRFADAMNDDFNTPEAIAVLFDLASEVNRAQGAEKQMLAGLLKSLGGTLNFLQR 406

Query: 394 -----IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                ++   +  +   S  IE+ +  R+   + K F+ AD IRK L  +G +LED
Sbjct: 407 DPTNFLQAGSKDQSGLSSEQIEEHIAARVAAKQAKDFAKADGIRKALLEQGVVLED 462


>gi|37679546|ref|NP_934155.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|37198290|dbj|BAC94126.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 509

 Score =  309 bits (792), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 264/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 51  LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 109

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +   +   D   L    P  +PR
Sbjct: 110 -LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFDALNMKRPDVEPR 162

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ +    YG  S++ +D+ + G RV  + 
Sbjct: 163 ATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVET 222

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 223 AKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 282

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 283 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 334

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----------L 352
           A  +R  ++  HYR  ++++ + L +A   L +    ++ +G+   A             
Sbjct: 335 AETVRYFLMSGHYRSQLNYSEENLNQARASLERL--YTSLRGLDFSAAPAGGEEYVSRFT 392

Query: 353 SALYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE    K  DL        +    A ++GI         K
Sbjct: 393 AAMNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAFLK 452

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED   PD     T W
Sbjct: 453 GDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED--GPDG----TTW 506

Query: 458 KQK 460
           ++K
Sbjct: 507 RRK 509


>gi|322388262|ref|ZP_08061866.1| cysteine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140934|gb|EFX36435.1| cysteine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 447

 Score =  309 bits (791), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 178/469 (37%), Positives = 257/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLRDFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       + +K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VANKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVSDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ LET      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALETID---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +D   L      
Sbjct: 288 ---GQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDSGELQAFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+  D NT + I  + ++A+  ++ N+D  +     A   + GI   +E L++ I +
Sbjct: 345 FVAAMDEDFNTANGITVVFEMAKWINSGNYDATVKEALTAMLEVFGIVFVEEVLDEEIEV 404

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            I+K  + R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 405 LIQKRQEAR----ANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|23097554|ref|NP_691020.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|30316161|sp|Q8ETZ9|SYC_OCEIH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|22775777|dbj|BAC12055.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 468

 Score =  309 bits (791), Expect = 6e-82,   Method: Compositional matrix adjust.
 Identities = 176/475 (37%), Positives = 250/475 (52%), Gaps = 55/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+   F+ ++   ++MYVCGPTVY++ HIGNARP IVFD + R L Y   + 
Sbjct: 3   IQIYNTLTRQKEIFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYRGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A+     +P+      +  +    +++D   L     T  PR
Sbjct: 62  -VDYVLNFTDVDDKIIKTAKDVGEEVPV------LADRFVNAYLEDVGALGVKKATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             + +  +I  I  +I  G+AYEA+ ++ F   S   YG  S + IDE + G R+     
Sbjct: 115 VMDTMDDIIAFISALIEKGYAYEADGDVYFKPRSFDTYGKLSHQSIDELRSGARIQVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++   E  W+SPWG GRPGWHIECSAM   +LG   DIH GG DL FPH
Sbjct: 175 KEDPLDFALWKQAKDDEIAWKSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  E  AN W+HNG++N++  KMSKS GNF+   +L++           
Sbjct: 235 HENEIAQSEAMNG-ETFANYWMHNGYINIDNEKMSKSLGNFVLARDLIQAH-------DP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------------SKWPQT 340
            V+R  ML  HYR PI+FT   L  A+  L                        +KW Q 
Sbjct: 287 RVLRFFMLSVHYRNPINFTEALLESAKTSLERIQTAYHNLSHRRDSSLNLTNDDAKWLQL 346

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASAH------ 390
            ++           + +D NT +AI  L  L++E+     +N     + +A         
Sbjct: 347 VSAAM---SKFEQDMDDDFNTANAISVLFDLSKEANVYLQENQTSTEVIDAFQDAISQIL 403

Query: 391 -ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGI + ++     +   IE L++ER    K + F+ AD IR  L+ KG +LED
Sbjct: 404 TVLGINILEDE-ETLLDETIEALIKERNEARKNRNFARADEIRDMLKEKGIVLED 457


>gi|302879529|ref|YP_003848093.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582318|gb|ADL56329.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 456

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 180/473 (38%), Positives = 263/473 (55%), Gaps = 41/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R   EF  I+P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR  +    + 
Sbjct: 2   LKIYNTLARDKQEFVPIEPNVVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWFKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +       N++I  +T +       D   L    P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAAEN------NESIHSLTQRFIDAMHVDADALGVTRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P+M+ +I  +  +G AY+A + ++ +       YG  S + +++ + G RV    
Sbjct: 114 ATQYVPEMLEMIAKLEANGLAYQAADGDVNYAVRKFEGYGKLSGKSLEDLRAGERVEVTD 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   E     W+S WGRGRPGWHIECSAM S  LG+ FDIHGGG DL
Sbjct: 174 AKNDPLDFVLWKHARDDEAEEVKWDSKWGRGRPGWHIECSAMGSKLLGEHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A +     N W+HNGF+ ++  KMSKS GNF TI E+L       +
Sbjct: 234 QFPHHENEIAQSEGAHQCSYV-NYWMHNGFVRVDNEKMSKSLGNFFTIREVL-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQTSTSKGI--ID------P 349
            +   V+R  +L  HYR P++++   L +A+  L +     ++ ++ G+  +D       
Sbjct: 286 QYDPEVVRFFILRAHYRSPLNYSDAHLDDAKKALDRLYTALKSGSASGVRAVDWTEAYAV 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI------EVCKEHL 401
              +A+ +D NT  AI  L  LA +   +++ D      A   +LG+      E  +   
Sbjct: 346 RFKAAMDDDFNTAEAIAVLFDLANDVNRSQSEDAAAQLKALGAVLGLLERDPTEFLQGAG 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           + +  I  +  +  R      K ++ AD IRK L + G +LED     N +R+
Sbjct: 406 SDDAQIVGQ--IAARNAAKLAKNYAEADRIRKALLADGIVLEDSAAGTNWRRV 456


>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 473

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 189/477 (39%), Positives = 266/477 (55%), Gaps = 55/477 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ--GWSV 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L C AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCAAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----------------STKNHDLLPIFNASAH--- 390
             +A+ +D NT  A+  L +L +E                 ST  H L  I     H   
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRH-LTNILGLVQHDVD 408

Query: 391 -ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             L  ++ +E L  +    IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 409 AFLKSDIGQEALTLS-DAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464


>gi|188997490|ref|YP_001931741.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229558793|sp|B2V6B4|SYC_SULSY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188932557|gb|ACD67187.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 487

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 187/510 (36%), Positives = 266/510 (52%), Gaps = 81/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K  +F  I P  +++Y CG TVYD+ H+G+ R +IVFD++ R LRY     
Sbjct: 3   LKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII RA+ E   +P     S+I+ K  +++  D  +        +PR
Sbjct: 61  NVIFVRNFTDVDDKIINRAKNE--CLPF----SVISDKFIKEYFDDAEKFRIEPADIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP +I  IQ ++  G+AYEA+ ++ F       YG  S+R IDE   G R+     
Sbjct: 115 VTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK +   EP WESPWG+GRPGWH EC AM   +LG+  DIHGGGLDL FPH
Sbjct: 175 KKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  WIHNG + + G+KMSKS GN+I + E+          +  
Sbjct: 235 HENEIAQAEALTG-KPFARYWIHNGLVTVNGQKMSKSLGNYIKLKEIYS-------KYEP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTE--------------AEILLSKWPQTSTSKGIIDPA 350
            ++RL +L  HYR P+DF+  ++ E              AE+L +K P     +G +  A
Sbjct: 287 DILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVL-NKLPIDENFEGDLYNA 345

Query: 351 V-------LSALYNDLNTVSAIQALHKLARE--------------STKNHDLLPIFNASA 389
           +        SA+ +D NT  A+ +L  L RE              S K  +       + 
Sbjct: 346 IQKAQSGFYSAMSDDFNTPEALASLFGLVREMNILRDKAIKHGGISKKAIESYKEAAKTL 405

Query: 390 HILGIEV---------CKEH-----------LNKNISIAIEKLVQERLILLKMKKFSSAD 429
           H +G ++         C +            +N+++   I+ L++ R    K K+F+ AD
Sbjct: 406 HDIGRDIFGLFDSLQPCIKQEEVKVKEKEESINEDL---IQVLIEAREKARKEKQFTIAD 462

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR +L  KG ILED          T+WK+
Sbjct: 463 LIRDKLAEKGIILED------APFGTKWKK 486


>gi|269960838|ref|ZP_06175209.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834502|gb|EEZ88590.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 460

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 263/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+     PA          
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDLNAAPAGGEEYVTRFT 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GDAGDDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|30316151|sp|Q8D8R1|SYC_VIBVU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 460

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 263/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ +    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----------L 352
           A  +R  ++  HYR  ++++ + L +A   L +    ++ +G+   A             
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERL--YTSLRGLDFSAAPAGGEEYVSRFT 343

Query: 353 SALYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE    K  DL        +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPDAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|91226019|ref|ZP_01260946.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269968727|ref|ZP_06182720.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91189460|gb|EAS75737.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269826654|gb|EEZ80995.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 460

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 263/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+     PA          
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDLNAAPAGGEEYVSRFT 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 465

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 180/472 (38%), Positives = 257/472 (54%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTDRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L+     
Sbjct: 234 DLQFPHHENEIAQAEGANG-NTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKV---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSK 344
              +   V+R  +L +HYR  ++++   L +A   L++               P  S S 
Sbjct: 289 ---YDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSESH 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH-- 400
           G        A+ +D NT  A+  L +LA E   T++  L+    A   ++G+     H  
Sbjct: 346 G---QRFREAMNDDFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAF 402

Query: 401 LNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L   +  A        +E  ++ R +    + F+ AD IR  L + G +LED
Sbjct: 403 LQGGVGAAADGLDAAEVEARIEARRVAKAERDFARADGIRADLLAAGIVLED 454


>gi|188584813|ref|YP_001916358.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349500|gb|ACB83770.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 469

 Score =  309 bits (791), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 268/492 (54%), Gaps = 57/492 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK  IK++NT+++K  EF       + MYVCGPTVYD+ H+GNAR  ++FDV+ R L Y 
Sbjct: 1   MKMSIKLFNTMKKKKEEFVPKQEGKVDMYVCGPTVYDYFHVGNARAFLIFDVVRRYLDYK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLA 118
             +  VTYV+NITDI+DK+I RA +        D I++  +  K T ++  D   +    
Sbjct: 61  GYQ--VTYVQNITDIEDKMINRANE--------DGITVAELAEKYTSEYFDDARAIGIKD 110

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             H P+AT HI ++I +IQ+++  G+AY    ++ FDT++  +YG   R+  +E   G R
Sbjct: 111 ADHHPKATEHIAEIIEIIQDLLDKGYAYRQGGDVYFDTAAFDDYGKLCRQDPEELVSGAR 170

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     KKNPADF+LWK     EP W+SP+G+GRPGWHIECSAMS  YL    DIH GG 
Sbjct: 171 VAVDDRKKNPADFVLWKSKKEGEPAWDSPFGQGRPGWHIECSAMSMKYLDTPLDIHAGGS 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE+AQS  A   +     W+H G+L ++ RKMSKS GNF+T+ +    +K+ 
Sbjct: 231 DLVFPHHENEVAQSEAATG-QDFCKYWMHVGYLEIDNRKMSKSMGNFLTVRDF--RQKYD 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIID 348
            R     V+RL ++  HYR P++FT + + +A+  L +          + + S  + + D
Sbjct: 288 PR-----VLRLFLMSAHYRSPLNFTDELIEQAKSSLDRLDNFYNNLKFYLEKSREQELTD 342

Query: 349 P-------------AVLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAH 390
                            +A+ +D NT SA+  +  LA+E          + L   N    
Sbjct: 343 KEQDIMEYLKQARTEFEAAMDDDFNTASALAVIFSLAKEINSYIGNGGENALVFKNTYDL 402

Query: 391 ILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +L  +     L +   I    IE+ +QER    K K F  AD IR +L  +G ILED   
Sbjct: 403 LLEFDQVMGLLPETDEILPEEIEQKIQEREQARKQKDFQRADAIRDELRDRGIILED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P+      RWK+
Sbjct: 461 PEG----VRWKR 468


>gi|332306241|ref|YP_004434092.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173570|gb|AEE22824.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 464

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 179/484 (36%), Positives = 255/484 (52%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  +  S + +YVCG TVYD +H+G+AR  + FD++ R LR+   E 
Sbjct: 2   LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        +    +T +       D   +  L P  +PR
Sbjct: 61  -VNYVRNITDIDDKIIQRANEN------GETTRALTERTIAMMHDDFAAINLLEPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+P++I +I+ +I  GHAY+A + +++FD SS  +YG  S++ +++  MG+RV    
Sbjct: 114 VTTHMPEIIAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK   P EP W SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DLIFP
Sbjct: 174 DKDDPMDFVLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H G + ++  KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCA-YDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVL-------KQHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           A  +R  ++  HYR  + ++   +T+A   L +            Q     G        
Sbjct: 286 AETLRYFLMSAHYRSQLSYSEDNITQARSALERLYTALRDVNANIQVDMQSGDYLARFDK 345

Query: 354 ALYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASAHILGI--EVCKEH 400
           A+ +D NT  A+  L  +A+E            ++  DL  I      +LGI      E+
Sbjct: 346 AMDDDFNTPEAMAVLFDVAKELNKAKAEEQSGHSRASDLAGILLNLGKVLGILQRSPSEY 405

Query: 401 LNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           L  +   A     IE L++ R      K + +AD  R  L     ILED      G   T
Sbjct: 406 LQGDQQDADEVAEIEALIKARNDARAAKDWPAADAARDGLNVLNIILED------GPSGT 459

Query: 456 RWKQ 459
            W++
Sbjct: 460 TWRK 463


>gi|254172364|ref|ZP_04879039.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033293|gb|EEB74120.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 476

 Score =  309 bits (791), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 184/481 (38%), Positives = 254/481 (52%), Gaps = 60/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           I+IYNTL R+  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L  R Y  
Sbjct: 3   IRIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TDIDDKII+RA +        +    +  +  + F++D   L        
Sbjct: 61  --TVLMVMNFTDIDDKIIKRANE------TGEDPKELAERFLRIFLEDMKALKVKPADVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+ ++I  ++ +   G+AYE ++ + F+     +YG  S+ K+++   G RV   
Sbjct: 113 PRVTEHMDEIINFVKKLEEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIF 232

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQS  C     +  + W+H GFL + G KMSKS GNF+T+ ELL       + 
Sbjct: 233 PHHENEIAQSEACFGH--EWVHYWMHTGFLMVNGEKMSKSLGNFVTVRELL-------KR 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS--------------------KW--PQ 339
           +   VIRL +L  HYR P+D++ + +  A+  L                     +W  P+
Sbjct: 284 YDPEVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMGRAEISFRWDEPE 343

Query: 340 TSTSKGIIDP--AVLSALYNDLNTVSAIQALHK--------LARESTKNHDLL----PIF 385
               + I D       A+ +D NT  A++A+ +        L    T    +L      F
Sbjct: 344 FRVYEAIRDARRKFYEAMDDDFNTAEALKAVFEVSNAINRYLTEVETPKESILRKAWEFF 403

Query: 386 NASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                + G+  +  KE    N    I+ L++ R  L K +KF  AD IR +L   G  LE
Sbjct: 404 RDVGEVFGLFEDYFKEQRAGNEEALIDLLIEVRAQLRKERKFDLADRIRDELRKLGIQLE 463

Query: 444 D 444
           D
Sbjct: 464 D 464


>gi|331701830|ref|YP_004398789.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129173|gb|AEB73726.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 468

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 179/476 (37%), Positives = 260/476 (54%), Gaps = 55/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  +F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 2   LQIFNTLTRKKEKFEPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  ARQ H ++        I  K    F++DT  L   +    PR
Sbjct: 61  -VKYVSNFTDVDDKMINAARQNHTTV------GAIADKYINAFMQDTAALNISSNVIHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
           AT +IP++I  ++ ++  G+AY+ + ++ F      +YG+     +D+ ++G      PE
Sbjct: 114 ATENIPEIIDFVKTLVDKGYAYDVDGDVYFRARKFKSYGALPHINVDQLEIGASQHVNPE 173

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  KK +P DF LWK+S   E  W+SPWG+GRPGWHIECS MS+ YLGK  DIHGGG DL
Sbjct: 174 EMAKKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           IFPHHENE AQS  A+  +     W+HNGF+ +  +  KMSKS GNFIT+++LL      
Sbjct: 234 IFPHHENERAQS-EANTGQTFVKYWMHNGFVTIGDDNEKMSKSLGNFITVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            ++    VIRL M  THYR PI ++   + EA   L K                    P+
Sbjct: 287 -KNLDGQVIRLLMSTTHYRRPIQYSDASVKEASSNLKKLQTAFNNLEYRLHNADEGDDPK 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------- 388
           T      I      A+ +D N  + I A+++LA+ +    +   +F  S           
Sbjct: 346 TDQEVRQIVADFTDAMDDDFNVQNGIAAVYELAKFANTYSERETVFKLSLQFIINTLRQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + + GI++ +  L  +    I  L+ ER      K F  +D IR++L+++G +LED
Sbjct: 406 SGVFGIKLEQSELKDD---EIWSLIHEREQARHDKDFIRSDEIREELKARGIVLED 458


>gi|121593996|ref|YP_985892.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|187629817|sp|A1W6E1|SYC_ACISJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120606076|gb|ABM41816.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 458

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 182/464 (39%), Positives = 257/464 (55%), Gaps = 43/464 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + EF  ++P ++RMYVCG TVYD  H+G+AR MI FDV+ R LR      
Sbjct: 3   LRIYNTLSRALEEFSPLEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRA--SGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PTH+PR
Sbjct: 61  AVTYVRNITDIDDKIIKRA------VENGETIRSLTDRMIDALHQDADALGIERPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  + 
Sbjct: 115 ATAYVPQMLDMIGTLQGKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAVQD 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK + P EP    W SP+G GRPGWHIECSAM    LG+ FDIHGGG DL
Sbjct: 175 GKHDPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A +W+HNGF+N++  KMSKS GNF TI ++L       +
Sbjct: 235 QFPHHENEIAQSEGATG-KPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  +R  ++ +HYR P++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 EYDAETVRFFVVRSHYRSPLNYSNVHLDDARAALKR---LYTALSLVAPAPVEVDWAEGY 343

Query: 353 -----SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVC--KEHLNK 403
                +A+  D  T  A+  L  LA E   +K+     +  A    LG+     ++ L  
Sbjct: 344 AARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSPAAAGLLKALGGHLGLLQADPQDFLKA 403

Query: 404 NISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +   AI+  +  R      K F+ AD IR  L ++G +L+D
Sbjct: 404 GAGLDEAAIQAQIAARATAKAAKNFAEADRIRNDLLAQGIVLKD 447


>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254781689|sp|C0QRE6|SYC_PERMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 487

 Score =  308 bits (790), Expect = 8e-82,   Method: Compositional matrix adjust.
 Identities = 181/508 (35%), Positives = 261/508 (51%), Gaps = 75/508 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  I P  +++Y CG TVYD  H+G+ R +IVFDV+ R LRY     
Sbjct: 3   LKVYNTLTGKKEEFVPIKPGEVKIYTCGVTVYDVNHVGHGRSLIVFDVIRRYLRYL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII RA+ E   +P     ++I  +  +++ +D           +PR
Sbjct: 61  NVYFVRNFTDVDDKIINRAKNE--CLPF----TVIADRYIKEYFQDAENFRIEPADVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP +I  IQ +I  G+AYE   ++ F       YG  S+R +DE   G RV     
Sbjct: 115 VTTHIPDIIDFIQRLIDKGYAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGARVEPGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL FPH
Sbjct: 175 KRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE+AQ+   +D+    A  WIHNG + + G+KMSKS GN+IT+ E+          + 
Sbjct: 235 HENELAQAEALSDK--PFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEI-------------LLSKWPQTSTSK------ 344
             V+RL +L  HYR P+DF+ +++ E +              +L K P+           
Sbjct: 286 PDVLRLLVLSVHYRSPLDFSWEKMEETKKAYERLKGAIDEYEILKKLPENPDFDEHLYDE 345

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARE----------------------------- 374
               +    +A+ +D NT  A+ +L  L RE                             
Sbjct: 346 IAKAEQGFYAAMSDDFNTPEALASLFTLVREMNILRDKAVKSGGISKKALESYKEASDVL 405

Query: 375 STKNHDLLPIFNASAHILGIEVCK-EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIR 432
            +   ++  +F++    + +E  K E   + I    +E L++ R    K K+F  ADYIR
Sbjct: 406 HSIGKEIFGLFDSLQPCIEVEEIKVEKAEEKIDTQLVEALIEVRNKARKEKQFEIADYIR 465

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++L   G ++ED   P      T+WK+K
Sbjct: 466 EKLSQLGIVIED--TPVG----TKWKKK 487


>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 476

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 195/494 (39%), Positives = 258/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF+ I    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 3   LKVYNTLTKRKEEFKPIREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEH--KGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RAR+        +    +  K  + F++D   L        PR
Sbjct: 61  TVLMVMNFTDIDDKIIRRARE------TGEDPKELAEKFIKVFLEDMNALKVKPADIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I  I+ +   G+AYE  + + F+      YG  S  KI+E + G RV     
Sbjct: 115 VTEHIGDIIDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKIEELRKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  C     +    W+H GF+ ++G KMSKS GNF+T+ ELL+        + 
Sbjct: 235 HENEIAQSEACFGH--EWVRYWLHTGFVMVKGEKMSKSLGNFVTVRELLQ-------RYS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------DPA 350
             VIR  +L  HYR P+D++ + L  A+  L +   T  +  I              D  
Sbjct: 286 PEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMERAELAYTWDEDDYE 345

Query: 351 VLSALYN-----------DLNTVSAIQALHKLA---------RESTKNHDL---LPIFNA 387
           V  A+ N           D NT  A++A+ +++         +E  K   L   L  F  
Sbjct: 346 VYEAIKNARKKFYEAMDDDFNTAEALKAVFEVSNAINKYLTEKERPKEAILRKALEFFKV 405

Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            + I GI  +  KE   +     I+ LV  R  L K K+F  AD IR++L   G  LE  
Sbjct: 406 VSEIFGIFEDYFKEEKREIEEELIKVLVDVRSQLRKEKRFDLADKIREELRRLGIQLE-- 463

Query: 446 KNPDNGQRMTRWKQ 459
              D GQ  T WK+
Sbjct: 464 ---DRGQE-TVWKR 473


>gi|238893488|ref|YP_002918222.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545804|dbj|BAH62155.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 461

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 268/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  IR  ++  HYR  ++++ + L +A   L + +     +   +D A         + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILGI--EVCKEHLNKN 404
           + +D NT  A   L  +ARE    K  D       +AH      +LG+  +  +  L   
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405

Query: 405 ISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +       IE L+Q RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDAEVAEIESLIQRRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 473

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 189/477 (39%), Positives = 267/477 (55%), Gaps = 55/477 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWN--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A+N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +           +   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQKTTETLDQSFIER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----------------STKNHDLLPIFNASAH--- 390
             +A+ +D NT  A+  L +L +E                 ST  H L  I     H   
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRH-LTNILGLVQHNVD 408

Query: 391 -ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             L  ++ +E L+ +    IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 409 DFLKSDIGQEALSLS-DAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464


>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 473

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 186/476 (39%), Positives = 268/476 (56%), Gaps = 53/476 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWN--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L C AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCAAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY  AN ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGSAYPAANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQS-EASTGEQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVL-- 352
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQMYGQTTTETLDQSFIER 349

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILGI------- 394
             +A+ +D NT  A+  L +L +E       +  D   +  ++     +ILG+       
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVDD 409

Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               ++ +E L  +    IE  +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 410 FLKSDIGQEALTLS-DAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR 464


>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 479

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 170/374 (45%), Positives = 221/374 (59%), Gaps = 32/374 (8%)

Query: 11  LERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGEKCVT 67
           + RK   F   DP +  + MYVCG TVYD++HIG+AR  + FDVLYR L R  Y    VT
Sbjct: 1   MTRKKEPFAPNDPDDKKVSMYVCGVTVYDYSHIGHARVYVAFDVLYRTLTRLGYD---VT 57

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           YVRN TD+DDKII+RA +        +    +  +    F +D + L CL PT +PRAT 
Sbjct: 58  YVRNFTDVDDKIIKRANEN------GEECDALVERFIAAFHEDMSSLGCLPPTMEPRATR 111

Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           H+  ++ + + ++  GHAY A   ++ F   S+P YG  S RK+++ + G RV     KK
Sbjct: 112 HVDDILRVTEALVEKGHAYPAEGGDVYFSVDSLPTYGKLSGRKLEDNRAGERVAIDERKK 171

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHH 245
           NPADF LWK S P EP W SPWG GRPGWHIECSAM  + + GK  DIHGGG DL+FPHH
Sbjct: 172 NPADFALWKASKPGEPSWASPWGEGRPGWHIECSAMIDATFGGKSIDIHGGGQDLVFPHH 231

Query: 246 ENEIAQS-----CCADRIEKT-----ANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           ENE+AQS     CC D  +          W+HNGF+ ++  KMSKS GNF TI E+  T 
Sbjct: 232 ENELAQSTAFCGCCDDAKDAKDAPPFVKYWVHNGFVKVDSEKMSKSLGNFFTIREV--TA 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAVLSA 354
           K+      A  +R  +L THYR  I++T + L EA   L    QT S +    + AV +A
Sbjct: 290 KY-----DATALRWMLLGTHYRAAINYTQRALEEASDRLYYLYQTLSEASDETETAVGAA 344

Query: 355 LYNDLNTVSAIQAL 368
           L +DLNT  AI +L
Sbjct: 345 LSDDLNTPLAIASL 358


>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 459

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 259/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L+Q +I  G AY A+N +++F+      YG  S++ +++ + G RV  + 
Sbjct: 114 ATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYLSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE    K+ DL        +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558797|sp|B6YUQ3|SYC_THEON RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 476

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 186/481 (38%), Positives = 250/481 (51%), Gaps = 60/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           I++YNTL ++  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L  R Y  
Sbjct: 3   IRVYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TDIDDKII RA +        +    +  K  + F++D   L        
Sbjct: 61  --TVLMVMNFTDIDDKIIRRANE------TGEDPKELAEKFLRYFLEDMKALKVKPADIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HI  +I  ++ +   G+AYE N+ + F+     +YG  S  K++E   G RV   
Sbjct: 113 PRVTEHIQDIIDFVRKLQEKGYAYEGNDGVYFEVRKFKDYGKLSGIKLEELVKGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIF 232

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQS  C     +    W+H GF+ + G KMSKS GNF+TI ELL+        
Sbjct: 233 PHHENEIAQSEACTGH--EWVRYWLHTGFVMVSGEKMSKSLGNFVTIRELLQ-------K 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPA------- 350
           +   VIR  +L  HYR P+D+T + +  A    E L +       +    D A       
Sbjct: 284 YSPEVIRFFVLQKHYRSPLDYTEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWDEEE 343

Query: 351 -------------VLSALYNDLNTVSAIQALHKLAR---------ESTKNHDL---LPIF 385
                           A+ +D NT  A++A+ +++          E  K   L   L  F
Sbjct: 344 FELYETVREARKKFYDAMDDDFNTAEALKAVFEVSNAVNRYLTKVEKPKESVLRKALEFF 403

Query: 386 NASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
              + + G+  +  KE    +    IE LV  R  L K + F+ AD IR +L++ G  LE
Sbjct: 404 KIVSEVFGLFEDYFKEQKAGDEEALIELLVSVRAELRKQRNFTLADKIRDELKALGIQLE 463

Query: 444 D 444
           D
Sbjct: 464 D 464


>gi|331006994|ref|ZP_08330231.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419182|gb|EGG93611.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 478

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 188/499 (37%), Positives = 268/499 (53%), Gaps = 66/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  ID   IR+YVCG TVYD+ HIG+AR +I FDV+ R LR    + 
Sbjct: 3   LTIYNTLAREKVIFTPIDAGKIRLYVCGMTVYDYCHIGHARVLISFDVIVRFLRSQGWD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII RA +        ++  I+  +      +D   L  L P  +PR
Sbjct: 62  -VEYVRNITDVDDKIINRAEEN------GESSEILAQRFIDAMHEDERALNILPPNQEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  +I +++ +I   +AY A NN++ +      NYG  S +K DE   G RV    
Sbjct: 115 ATAHMDNIIAMVKTLINKNYAYVASNNDVYYRVGKFGNYGQLSGKKPDELMAGARVEVGD 174

Query: 184 HKKNPADFILWKRSTPMEP---------GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            K++P DF LWK   P             WESPWG GRPGWHIECSAMS   LG  FDIH
Sbjct: 175 IKEDPRDFALWKAIDPSNVVGDGKNAPVSWESPWGAGRPGWHIECSAMSKSCLGNSFDIH 234

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHENEIAQS  A+   K  N W+H G + ++G KMSKS GNF TI ++L  
Sbjct: 235 GGGPDLPFPHHENEIAQSEAANGC-KYVNYWLHAGAVRVDGEKMSKSLGNFFTIRDVL-- 291

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                + + + VIR  ++ +HYR  I+++   L EA+  L ++ QT      ++PA + +
Sbjct: 292 -----KKYHSEVIRYLIVNSHYRSSINYSEDNLIEAKSGLDRFYQTLKHYTDVEPAAIES 346

Query: 355 LY-------------NDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHILG 393
           L              +D NT  A+  +++L +        ++ K   L+    A A+ILG
Sbjct: 347 LSDSVYYQHFVDSMNDDFNTRIALSGMYELIKTINTVAVDDAEKAKKLVAELKAMANILG 406

Query: 394 I------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +            +   + +  +I + IE L+ +R+   K K++  AD IR+QL+ +G +
Sbjct: 407 VLQADPTEFLQAEDKTSQVVGLSIDV-IETLISQRIQAKKDKQYQRADDIRQQLDDQGVL 465

Query: 442 LEDYKNPDNGQRMTRWKQK 460
           LED +        T W++K
Sbjct: 466 LEDSREG------TAWRRK 478


>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  308 bits (790), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 186/483 (38%), Positives = 258/483 (53%), Gaps = 75/483 (15%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD +HIG+AR  + FDVLYR LR+   E  V YVRN TD+DDKII RA  E 
Sbjct: 1   MYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYE--VNYVRNFTDVDDKIIARA-NEM 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
              PIN     ++ +  Q+F  D T L CL P+ +P  ++H+PQ+I +I+ II +  AY 
Sbjct: 58  GEDPIN-----LSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYR 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
              ++ F     P YG  S RK+++ + G RV     KKNPADF LWK +   EP W+SP
Sbjct: 113 VEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIAQSC A + +   + WIH
Sbjct: 173 WGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACK-QSNISYWIH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NGF+ ++  KMSKS GNF TI ++++        +    +RL ++ THYR PI+++  +L
Sbjct: 232 NGFVTIDSEKMSKSLGNFFTIRQVIDI-------YHPLALRLFLIGTHYRSPINYSDVQL 284

Query: 328 TEAEILLSKWPQ------------------------------------TSTSKGIIDPAV 351
             A   +    Q                                    TS S  +  P V
Sbjct: 285 ESASDRVFYIYQTLHDCQNAMDQDDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVV 344

Query: 352 LSALYNDLNTVS----------------AIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           L+AL + L T++                ++ AL K+ R+      L+P   + A +L + 
Sbjct: 345 LAALSDPLKTINDLLHTRKGKKQELRLESLAALEKVIRDVLTILGLMPASYSEA-LLQLR 403

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +K     I + ++ER +  K K++  +D IRK L + G  L D  +PD     T
Sbjct: 404 EKALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMD--SPDG----T 457

Query: 456 RWK 458
            W+
Sbjct: 458 TWR 460


>gi|290476082|ref|YP_003468980.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175413|emb|CBJ82216.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 460

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 183/482 (37%), Positives = 263/482 (54%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA +       N++   +T++   +   D   L    P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRATEN------NESCDALTTRMLSEMHSDFDALNIQRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I + + +I  GHAY A+N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATQHISEIIQITEELINRGHAYVADNGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEIAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGVGRPGWHIECSAMNGKQLGQHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HGGPYVNYWMHSGMVMVDKEKMSKSLSNFFTIRDVLGY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +              T     +     A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSAQPTGSEAFEARFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILG-IEVCKE------ 399
           + +D NT  A   L  +ARE            + L       A ILG +E   E      
Sbjct: 346 MNDDFNTPEAYSVLFDIAREINCLKTENLAAANGLAAELRKLAGILGLLEQEPEQFLQGG 405

Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            H++ +++  IE L+++R      K+++ AD  R QL +    LED      G + T W+
Sbjct: 406 AHVDDDVA-QIEALIKQRNDARTNKEWALADAARDQLNAMRIELED------GPQGTTWR 458

Query: 459 QK 460
           +K
Sbjct: 459 RK 460


>gi|77459860|ref|YP_349367.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|109894924|sp|Q3KA28|SYC_PSEPF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77383863|gb|ABA75376.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 460

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 176/478 (36%), Positives = 257/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T +      +D  RL    P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFEALTERMIAAMHEDEARLNIKKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA--------L 355
             V+R  ++ +HYR  I+++   L +A+  L ++         + PA   A        +
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAGGEAFVERFTQVM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +                A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A ++ L+Q RL     K ++ +D IR QL + G +LED      G+  T W+
Sbjct: 406 EGRVDAAEVDALIQARLTARANKDWAESDRIRDQLTAMGVVLED------GKGGTTWR 457


>gi|291543500|emb|CBL16609.1| cysteinyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 464

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 173/471 (36%), Positives = 259/471 (54%), Gaps = 52/471 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEK 64
           +YNT+ RK  E        + +Y CGPTVY+F HIGNARP+  FDVL R L  R Y    
Sbjct: 3   LYNTMSRKKEELLPQQGKQVNIYACGPTVYNFIHIGNARPICAFDVLRRYLTWRGY---- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKII+RA +E  S       + +  K   ++  D   L  +     P+
Sbjct: 59  TVKYVQNFTDVDDKIIKRANEEGSSA------AQVAEKYIAEYKTDAHGLNVMDADVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  ++ ++  GHAYEA+ ++ F T+S P YG  S+  +++ + G R+     
Sbjct: 113 VTTCMQDIIDFVKALVDSGHAYEADGDVYFRTASFPEYGKLSKNSMEDLQAGARIGVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP W+SPWG+GRPGWHIECSAMS  YLG   DIH GG DLIFPH
Sbjct: 173 KESALDFAVWKAAKPGEPYWDSPWGKGRPGWHIECSAMSRKYLGDTLDIHCGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  AN+W+HNG++N++ +KMSKS GNF T  E+ E  K+G      
Sbjct: 233 HENEIAQSESVTG-KPLANLWMHNGYINVDNKKMSKSLGNFFTAREVAE--KYG-----Y 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDP------ 349
            V+R  M+  HYR PI++ V+ L   +  L +             +   G  DP      
Sbjct: 285 EVVRYMMVQAHYRSPINYCVELLDACKASLERLYTCRDTLDRAIANAPAGAADPDSLALF 344

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARE-STKNHDLLP----------IFNASAHILG 393
                A ++A+ +DLNT   +  L  L R+ +T+++D             +F+    +LG
Sbjct: 345 DQRKQAFITAMDDDLNTADGVSVLFDLVRDLNTRSNDPATTKDTLTAGARLFDELTGVLG 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   ++  N+ I   +++LV  R +  K K F+ AD +R ++ + G+ +++
Sbjct: 405 LLYNRKQGNE-IPAQVQELVDARTVARKAKDFAEADRLRDEIAALGYAVKE 454


>gi|145633713|ref|ZP_01789439.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144985473|gb|EDJ92294.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 459

 Score =  308 bits (790), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 183/482 (37%), Positives = 267/482 (55%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   E  W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENELSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCA-HGGQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  +L  HYR  ++++ + L  A+  L +    +  +G    AV            
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERL--YTALRGTDQSAVAFGGENFVETFR 343

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCK 398
            A+ +D NT +A+  L ++ARE        + K + L         ILG+      +  +
Sbjct: 344 EAMDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQ 403

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+
Sbjct: 404 AGSDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWR 457

Query: 459 QK 460
           ++
Sbjct: 458 KQ 459


>gi|295401941|ref|ZP_06811904.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109240|ref|YP_003987556.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294976071|gb|EFG51686.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214341|gb|ADP72945.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 466

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 185/487 (37%), Positives = 262/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   E 
Sbjct: 4   IRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ AR+    +P       +  +  Q + +D T L C      PR
Sbjct: 63  -VKYVSNFTDVDDKLIKAARELGEDVPT------VAERFIQAYFEDITALGCKKADVHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE + ++ + T     YG  S + IDE K G R+     
Sbjct: 116 VTENMDTIIEFIQALVEKGYAYEVDGDVYYRTRKFAEYGKLSHQSIDELKAGARIEIGEK 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 176 KEDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R    
Sbjct: 236 HENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RQIDP 287

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIID------ 348
            V+R  ML  HYR PI+++          ++RL  A   L    Q+ST+    D      
Sbjct: 288 QVLRFFMLSVHYRHPINYSEELLENAKKGLERLKTAYFNLKHRLQSSTNLTDDDEQWLAR 347

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAREST-----KN------HDLLPIFNASAHIL 392
                 A +  + +D NT + I  L +LA+++      KN      H  L        +L
Sbjct: 348 IQEQHEAFIREMDDDFNTANGIAVLFELAKQANLYLHEKNTSERVIHAFLRELEQLLDVL 407

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI + +    + +   IE L+Q+R    K + F+ AD IR +L +K  ILED   P    
Sbjct: 408 GITLQE---EELLDEEIEALIQKRNEARKNRNFALADQIRDELRAKNIILED--TPQG-- 460

Query: 453 RMTRWKQ 459
             TRWK+
Sbjct: 461 --TRWKR 465


>gi|24111894|ref|NP_706404.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30062010|ref|NP_836181.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|61216306|sp|Q83M27|SYC_SHIFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24050695|gb|AAN42111.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30040254|gb|AAP15987.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|313646855|gb|EFS11312.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|332761515|gb|EGJ91797.1| cysteinyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332768439|gb|EGJ98623.1| cysteinyl-tRNA synthetase [Shigella flexneri 2930-71]
          Length = 461

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+N  DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNRMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|319399722|gb|EFV87971.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 466

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 263/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T   R
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGII 347
            V+R  M+  HYR PI++ ++                  + E E + +   + S     I
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREEIATDLEEQSEYIQQI 345

Query: 348 DPAV---LSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILG 393
           D  +    + + +D NT +A+ A + LA+       E+T +  +L     +++  + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILED 456


>gi|281599852|gb|ADA72836.1| Cysteinyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|332763819|gb|EGJ94057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-671]
 gi|333021864|gb|EGK41112.1| cysteinyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 461

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/482 (39%), Positives = 270/482 (56%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNSDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+N  DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNRMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229558616|sp|A9VNA2|SYC_BACWK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 465

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 179/487 (36%), Positives = 260/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS----------- 343
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST            
Sbjct: 287 QLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAE 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 MEKFQVAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFSIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   + + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 459

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 181/480 (37%), Positives = 260/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L+Q +I  G AY A+N +++F+      YG  S++ +++ + G RV  + 
Sbjct: 114 ATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRRVPAAGGEEYLSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE    K+ DL        +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R     +K +++AD  R +L   G +LED  N       T W++K
Sbjct: 406 AEDEEAEQIEALIKLRNDSRAVKDWANADMARDKLNEMGIVLEDCPNG------TTWRRK 459


>gi|167550932|ref|ZP_02344688.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205324269|gb|EDZ12108.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 461

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGTDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
           + +D NT  A   L  +ARE    K  D+      ++H+  I      L +   +     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 408 ---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082069|sp|A6VX53|SYC_MARMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 460

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 181/467 (38%), Positives = 262/467 (56%), Gaps = 41/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K   F+ I+   + MYVCG TVYDF HIG+AR MI FDV+ R +R+   E 
Sbjct: 2   LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N++   +T +      +D  RL    P  +P+
Sbjct: 61  -LNYVRNITDVDDKIIKRAEEN------NESTQSLTERMIAAQREDELRLGNKMPDREPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I ++Q +I  G AY+  + ++ +  +   +YG  + RK+++   G R+  + 
Sbjct: 114 ATEFMQEIIDMVQVLIDKGFAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGARIDVEV 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF+LWK++   E  W SPWG GRPGWHIECSAMS++ LG  FDIHGGG DL FP
Sbjct: 174 AKEHPADFVLWKQAKAGEVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N W+H G + +   KMSKS GNF T+ ++L   KF      
Sbjct: 234 HHENEIAQSEAATGKE-YVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVL--AKFN----- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLS-----AL 355
             V+R  M+ + YR  ID++ Q L EA++ L +       + +    +P V +     A+
Sbjct: 286 PEVVRYLMVSSQYRSAIDYSDQSLLEAKVALERLYTALRQQQVAESFEPTVFTERFEEAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGIEVCK-EHLNKNIS 406
            +D NT  A+  L +L RE    K  D      L     + A +LG+     E+  +N +
Sbjct: 346 KDDFNTAVAVSVLFELVRELNKAKTEDANKASLLAAELRSLAELLGLLYQDPEYFLQNST 405

Query: 407 -------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                  +AI+ L+ ER    K K F+ +D IR +L S+G  L D +
Sbjct: 406 VSEGLGEVAIQALIDERTQARKDKNFARSDEIRDELASQGIELLDSR 452


>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 474

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 263/493 (53%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL ++   F   +P  +RMYVCGPT Y++ H+GNAR ++VFD + R L Y  G +
Sbjct: 2   IEVYNTLTKRKEPFVPREPGRVRMYVCGPTTYNYIHLGNARALVVFDTIRRYLEYR-GFR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII+RA +E    P   A+  I     + + +D  ++        PR
Sbjct: 61  -VFFVQNFTDIDDKIIKRAAEEKMD-PQELALKYI-----EAYFEDADQINIKRADVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++H+P+++ LI  +I  G AY A  ++ F     P YG  S R++ E + G RV    +
Sbjct: 114 VSDHLPEIVELISILIDKGFAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEPGEN 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P EP W SPWG GRPGWHIECSAM+  YLG  FDIHGGG DLIFPH
Sbjct: 174 KRDPLDFALWKKAKPGEPSWPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A      A  W+HNGF+ ++  KMSKS GN   + +++E        +P 
Sbjct: 234 HENEIAQSEAATG-RPFARYWLHNGFITVKEEKMSKSLGNVFLLRKVMEL-------YPP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----W-------PQTSTSKGIIDPAV-- 351
           P +RL +L THYR P+ +T + L  A   LS+    W        Q   S G  +     
Sbjct: 286 PAVRLFLLSTHYRSPLAYTPEYLEGAAKALSRLRSSWLFLQEAQKQAEESSGGTEQLARL 345

Query: 352 -------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------FNASA 389
                   +A+ +D NT  A+     LA E     +L P+               FN   
Sbjct: 346 DKWEQDFTAAMDDDFNTARALALFFDLAHEINSWAELRPLPPAPVLRRALLLWVSFNRVL 405

Query: 390 HIL----GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            +     G+ V ++     +   ++ LV+ R    + K +++AD IR+ L++ G +LED 
Sbjct: 406 GLFPERRGLPVVEQERTMVLEELVKLLVEIRQEARQRKDWATADRIRESLKNLGIVLED- 464

Query: 446 KNPDNGQRMTRWK 458
             P      TRW+
Sbjct: 465 -TPAG----TRWR 472


>gi|118475860|ref|YP_893011.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|187629790|sp|A0R8G1|SYC_BACAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118415085|gb|ABK83504.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 465

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 181/487 (37%), Positives = 262/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I  ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIHELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|291453078|ref|ZP_06592468.1| cysteinyl-tRNA synthetase 1 [Streptomyces albus J1074]
 gi|291356027|gb|EFE82929.1| cysteinyl-tRNA synthetase 1 [Streptomyces albus J1074]
          Length = 486

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 171/471 (36%), Positives = 255/471 (54%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   + 
Sbjct: 23  IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQSAPHIGHIRSGLNFDILRRWFAYRGYD- 81

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII++ A QE P   I         +N + F      L CL PT++P
Sbjct: 82  -VTFIRNVTDIDDKIIKKSAEQERPWWAIG-------YENERAFNNGYDALGCLPPTYEP 133

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+P+MI +++ +I  GHAYEA+  + FD  S P Y   S + +DE +  +   E  
Sbjct: 134 RATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSFPEYLELSNQDLDELRQPSGEGET- 192

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+FP
Sbjct: 193 GKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVFP 252

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 253 HHENEIAQAKAYG--DDFATYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHWR 303

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----------KWPQTSTSKGIIDPAVL 352
             V+R  +   HYR  I+++ + L EAE   +           K  +T      + PA  
Sbjct: 304 PIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFMQRVTEKAGETPEPATEVPPAFA 363

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL-- 401
            A+ +DL    A+  +H   R+                L    A   +LG++    H   
Sbjct: 364 EAMDDDLGVPQALAVIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPYDPHWAG 423

Query: 402 ----NKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILED 444
                +++  A++ LV+    +R      K +++AD IR QL+  G ++ED
Sbjct: 424 EADRGEDLHGAVDTLVRLVLDQREAARTRKDWATADAIRDQLQQSGLVIED 474


>gi|239981215|ref|ZP_04703739.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 466

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 171/471 (36%), Positives = 255/471 (54%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQSAPHIGHIRSGLNFDILRRWFAYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII++ A QE P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIIKKSAEQERPWWAIG-------YENERAFNNGYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+P+MI +++ +I  GHAYEA+  + FD  S P Y   S + +DE +  +   E  
Sbjct: 114 RATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSFPEYLELSNQDLDELRQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+FP
Sbjct: 173 GKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQAKAYG--DDFATYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----------KWPQTSTSKGIIDPAVL 352
             V+R  +   HYR  I+++ + L EAE   +           K  +T      + PA  
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFMQRVTEKAGETPEPATEVPPAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL-- 401
            A+ +DL    A+  +H   R+                L    A   +LG++    H   
Sbjct: 344 EAMDDDLGVPQALAVIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPYDPHWAG 403

Query: 402 ----NKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILED 444
                +++  A++ LV+    +R      K +++AD IR QL+  G ++ED
Sbjct: 404 EADRGEDLHGAVDTLVRLVLDQREAARTRKDWATADAIRDQLQQSGLVIED 454


>gi|258512691|ref|YP_003186125.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479417|gb|ACV59736.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 474

 Score =  308 bits (789), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 179/477 (37%), Positives = 249/477 (52%), Gaps = 53/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YN+L  K    Q ++P  +R Y CGPTVY F H+GNAR  +VFD + R L Y   E 
Sbjct: 3   ILLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLEYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDD+II+RA++      +  +   +  +N + + +D  +L     T  PR
Sbjct: 62  -VRFVQNFTDIDDRIIQRAQE------LGISPRELAEENIRYYFEDAGKLFIRPATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  IQ++I  GHAYE N  + FDTSS P YG  S +  ++ + G R+  +  
Sbjct: 115 VTECVDEIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQDE 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK + P E  W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 175 KDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG LN+ G KMSKS GNFI   +LLE +         
Sbjct: 235 HENEIAQSE-AHSGKTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERRD-------P 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------------------W 337
             +R  +L  HYR P+++T + L +AE  LS+                            
Sbjct: 287 RAVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMRGALDRADEV 346

Query: 338 PQTSTSKGI--IDPAVLSALYNDLNTVSAIQALH--------KLARESTKNHDLLPIFNA 387
           P T     +  I  A + A+ +D NT   + A+         +L        DL    + 
Sbjct: 347 PSTRGRSDVEQIRSAFIQAMDDDFNTADGMAAIFDGVRVVNTRLEEGGVTLGDLRLYRDL 406

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +LG+    +   + +   IE+L+ ER    K + F+ AD IR QL  +G +LED
Sbjct: 407 FVELLGVLGIPKKEEERLEDEIERLIAERAEARKRRDFARADEIRDQLRHRGIVLED 463


>gi|299821033|ref|ZP_07052921.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816698|gb|EFI83934.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 473

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 261/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL R+   F+ +    + MYVCGPTVY++ HIGNARP+I FD + R L Y   + 
Sbjct: 3   LQLFNTLTREKEVFKPLVNGKVSMYVCGPTVYNYIHIGNARPIIFFDTVRRYLTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +   ++P       +  K    F +D  +L     T  PR
Sbjct: 62  -VNYVSNFTDVDDKLIRAAEELDLTVPE------VADKFIHAFFEDVDQLNVARATTNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  IQ ++  G+AYE+  ++ F T     YG  S + + + + G RV     
Sbjct: 115 VTENMQEIIDFIQALVDKGYAYESAGDVYFATKKFDAYGKLSHQPLQDLQHGIRVETTDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESPWG+GRPGWHIECSAM+  +LG   DIH GG DLIFPH
Sbjct: 175 KRDELDFTLWKAAKPGEINWESPWGKGRPGWHIECSAMAQKFLGDTIDIHAGGHDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE+EIAQS  A   ++ AN W+HN FLN++G KMSKS GNFIT++++L        +  A
Sbjct: 235 HEDEIAQSE-ARTGKQFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL--------AEHA 285

Query: 305 P-VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------------- 336
           P V+R  ML  HYR PI  +   L +A+  L +                           
Sbjct: 286 PDVVRFFMLSVHYRNPISLSEDTLEDAKNSLERLRTAYQNIDYRIQHAEEDVADEETTED 345

Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES-----------TKNHDLLPIF 385
           W +  T    +  +    + +D NT +AI   H+LA+ +           T   + L + 
Sbjct: 346 WLEQLTE---LKQSFEDEMDDDFNTANAITVFHELAKRANIYLAEEDVSITVLREFLSML 402

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
              A++LG+++  E   +     IE L++ERL     + F  AD IR+ L SK  ILED 
Sbjct: 403 QLFANVLGLKLETEQAFELADEEIEALIEERLKARNERNFERADEIRELLRSKHIILEDT 462

Query: 446 KNPDNGQRMTRWKQ 459
               +G R  R ++
Sbjct: 463 A---HGTRFKRGEE 473


>gi|254168458|ref|ZP_04875302.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622513|gb|EDY35084.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 455

 Score =  308 bits (788), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 188/465 (40%), Positives = 251/465 (53%), Gaps = 41/465 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL  +  EF  +    + +YVCGPT YD+AHIG+ARP I+FDV  R L Y   + 
Sbjct: 1   MKIYDTLSGEKKEFVPVHEGRVGIYVCGPTTYDYAHIGHARPAILFDVFRRFLEYMGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  + NITD+DDKII +A  E    PI      +     ++++KD   L        P+
Sbjct: 60  -VILISNITDVDDKIINKA-NELGKDPIE-----MAHYYAREYLKDMDALRVRRANIIPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I LI+ ++  G+AYE+  ++ F      +YG  S RKI++   G RV     
Sbjct: 113 ATRHIEEIINLIKTLVDKGYAYESGGDVYFSVKKFKDYGKLSHRKIEDMVAGARVEVNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS +YLG   DIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKASKPGEPSWQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G +  E  KMSKS GN   I + L       + +PA
Sbjct: 233 HENEIAQSEAATG-KPFSKYWMHVGLVRFEKEKMSKSIGNVFLIKDFL-------KKYPA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-W--------------PQTSTSKGIIDP 349
            V+RL  L +HYR+P DF+ + + EA  LL K W              P     K I D 
Sbjct: 285 EVLRLMYLNSHYRKPYDFSEKNIEEALPLLEKIWSTYQILKNSAMQEGPSEEVEKRIEDS 344

Query: 350 --AVLSALYNDLNTVSAIQ---ALHKLARESTKNHDLLPIFN---ASAHILGIEVCKEHL 401
              ++++L +D NT  A++   +    ARE  K  D L   N       I  I    ++ 
Sbjct: 345 RKKIIASLEDDFNTREAMKEYLSFINFARE-LKGGDALAALNFLKEMDEIFDILPRGDNE 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            K   + IE L+  R    K K +  ADYIR +LE  G  +ED K
Sbjct: 404 GKEREL-IELLLNVRNEERKRKNYEIADYIRNELEKIGIKIEDTK 447


>gi|325686898|gb|EGD28923.1| cysteine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 450

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 178/472 (37%), Positives = 254/472 (53%), Gaps = 39/472 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L   + T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKKEGIT-PKE-----VADKYIAAFHEDVTALGVKSAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
             PR  + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 QHPRVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSAL 355
                   V+R      HYR+PI+FT + + +A   L     T      G  D A   A 
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYDQPFTGQADSAQFQAF 344

Query: 356 YN--------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKN 404
            +        D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAALAELLEVFGIVFVEEVLDAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 405 ----IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 449


>gi|329298451|ref|ZP_08255787.1| cysteinyl-tRNA synthetase [Plautia stali symbiont]
          Length = 461

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/482 (38%), Positives = 257/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  E + I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY  G K
Sbjct: 2   LKIYNTLSRQKEELKPIHACEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYV-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESIETLTNRMIAEMHKDFAALGILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I LI  +I  GHAY A+N +++FD  S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATRHIGEIIELIGKLIDRGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA       N W+H+G + ++  KMSKS GNF T+ ++L+        + 
Sbjct: 234 HHENEVAQSTCA-HDGPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKG--IIDPAVLSA 354
           A  +R  ++  HYR  ++     L +A   L +          ++T  G    +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNDGEDNLNQARAALERLYTALRHTDASATPAGGEAFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI--------EVCK 398
           + +D NT  A   L  +ARE  +           L       A +LGI            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKSEDKAAADALAAKLRQLADVLGILQQDPEQFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +N +    IE  V+ R      K ++ AD  R +L   G I+ED      G + + W+
Sbjct: 406 AQVNADEVAEIEHWVKTRANARAAKDWAQADIARDKLNELGVIVED------GPKGSSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 338

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 150/324 (46%), Positives = 209/324 (64%), Gaps = 16/324 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++++N++ +K   F+ +    +RMYVCG T YDF+HIG+AR  + FDVLYR L++   E
Sbjct: 10  QLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYE 69

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D  +L CL PT +P
Sbjct: 70  --VEYVRNFTDIDDKIIKRANEA------GETVTSLSSRFINEFLLDMAQLQCLPPTCEP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T+HI  +I LI  I+ +G AY    ++ F   + P Y S S RK+D    G+RV    
Sbjct: 122 RVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVDT 181

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIFP
Sbjct: 182 RKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFP 241

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   E     W+HNGF+N + +KMSKS+ NF TI ++++        + 
Sbjct: 242 HHENELAQSRAA-YPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDL-------YH 293

Query: 304 APVIRLAMLMTHYREPIDFTVQRL 327
              +R  ++ THYR  ++ + + L
Sbjct: 294 PMALRFFLMRTHYRGDVNHSDKAL 317


>gi|332532274|ref|ZP_08408155.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038372|gb|EGI74817.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 459

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 181/464 (39%), Positives = 262/464 (56%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+  +F+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+   + 
Sbjct: 2   VNIYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +   SI  ND    +T + T+   +D   L  L P  +P 
Sbjct: 61  -LKYVRNITDIDDKIIKRANENGESI--ND----LTVRMTKAMHEDFDSLNMLRPDIEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+H+ ++I +++ +I  GHAY  A+ +++FD S+   YG+ S++ +   + G+RV    
Sbjct: 114 VTSHMDEIIAMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W SPWG GRPGWHIECS MSS +LG+ FDIHGGG DL FP
Sbjct: 174 DKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSVMSSKHLGEHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   K  N WIH G + +   KMSKS  NF T+ E+L       +++ 
Sbjct: 234 HHENEIAQSCCANN-GKYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KAYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------WPQTSTSKGIIDPAVL-SA 354
           A  +R  ++  HYR  ++++ + L +A   L +         P     +G    A    A
Sbjct: 286 AESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVVPVECDLEGNEFVAKFRKA 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHD------LLPIFNASAHILGI-----EVCKEHL 401
           + +D NT  A+  L +LA+E    K  D      L  I  +   +LG+     E   +  
Sbjct: 346 MNDDFNTPEALPVLFELAKELNRVKESDAGQAGKLAFILRSLGEVLGVAQQAPEAFLQGG 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +  +A IE L+ +R      K +++AD  R  L + G ILED
Sbjct: 406 QDDDEVATIEALIVKRNEARASKDWAAADEARDALNALGVILED 449


>gi|323490593|ref|ZP_08095798.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395685|gb|EGA88526.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 467

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 176/487 (36%), Positives = 264/487 (54%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+N+L R+  EF  ++   ++MYVCGPTVY++ HIGNARP+IV+D + R L+Y   + 
Sbjct: 3   IQIFNSLSRQKEEFIPLEEGKVKMYVCGPTVYNYIHIGNARPVIVYDTVRRHLQYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +    + ++T  L C      P 
Sbjct: 62  -VKYVSNFTDVDDKLIKAANELGQEVPE------IAERFIAAYFENTKALGCAEADVHPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+H+ Q+I  I  +I  G+AYE+  ++ + T     YG  S + +DE K+G RV     
Sbjct: 115 VTDHMAQIIEFIVALIEKGYAYESQGDVYYRTRKFDGYGKLSHQSVDELKIGARVETGDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF+LWK + P E  W+SPWG+GRPGWHIECS M+  +LG   DIH GG DL FPH
Sbjct: 175 KEDELDFVLWKAAKPKEISWDSPWGKGRPGWHIECSVMAREHLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A+ W+HNG++N++  KMSKS  NF+ +N++L       +    
Sbjct: 235 HENEIAQSE-AFTGKPFAHYWMHNGYINIDNEKMSKSLNNFVLVNDIL-------KELDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWP----QTSTSKGI---------- 346
            V+R  ML  HYR PI+++ Q + +A    E L + +     + S S  +          
Sbjct: 287 QVLRFFMLSVHYRHPINYSQQLVEDAVAGLERLRTAYANLKHRLSASADLGDHSDTWVHK 346

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
              I  A +  + +D NT +AI +L  L+R S                 + +F+  A IL
Sbjct: 347 IEEIKTAFIETMDDDFNTANAISSLFDLSRLSNTYLLEKQTATSVLETFIAVFDELAGIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+   ++   + +   +E L+ ER+   K + F+ AD IR   + K  ILED        
Sbjct: 407 GLPFNQQ--EELLDEEVEALMAERIEARKNRDFARADEIRDLFKEKNIILED------TA 458

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 459 QGTRWKR 465


>gi|328955961|ref|YP_004373294.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456285|gb|AEB07479.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 488

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 176/428 (41%), Positives = 234/428 (54%), Gaps = 45/428 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY++  R   EF+ I+   +RMYVCGPTVYD AHIGNAR  I  D + R L     E 
Sbjct: 1   MRIYSSQTRVKREFKPIEAGRVRMYVCGPTVYDDAHIGNARTFITLDAIRRWLIASGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII RA  +  S         +  +  ++F+    R   L P  +PR
Sbjct: 60  -VTFVQNLTDVDDKIIGRAADQGRSA------EQVAQQFAERFIDVMRRANVLDPDIRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP MI +I+++I  GHAY A N ++ F   S P+YG  S R IDE  +G R+ E  
Sbjct: 113 ATREIPAMIEMIKSLIKQGHAYAAGNGDVYFSVRSDPSYGEVSGRDIDELMVGARIEENA 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH EC+AM   +LG   DIHGGG DLIFP
Sbjct: 173 VKRDPLDFALWKAAKPGEPMWDSPWGPGRPGWHTECAAMVHRHLGCPIDIHGGGSDLIFP 232

Query: 244 HHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENE AQ+ CC    E  AN W+H G L ++G KMSKS GNF T+ E+L+         
Sbjct: 233 HHENECAQAECCWH--EGFANTWLHVGMLMVDGEKMSKSLGNFWTLEEVLDRHS------ 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KW--------PQTSTSKG 345
            A  +RL ML THYR P+DF+ +RL  A+  L          +W        P  S ++G
Sbjct: 285 -AAALRLLMLQTHYRTPLDFSFERLEGAQTSLGRIVSTVGNLRWASDRASGNPDASLAQG 343

Query: 346 IIDPAVLS------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           +     ++       + +D NT  A+ A   LA   T     L     S        C E
Sbjct: 344 LARRMQIARSEFKEQMDDDFNTAGALGACFSLA---TAARSYLECAGVSVDASIALACVE 400

Query: 400 HLNKNISI 407
            L ++ S+
Sbjct: 401 FLEESFSV 408


>gi|293392469|ref|ZP_06636789.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424871|gb|EFE98080.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 461

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 256/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII RA +        +    +T +   +   D   L    P  +PR
Sbjct: 61  -LNYVRNVTDVDDKIIRRAAEN------GETCDQLTGRMLAEMHADFDALLIERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L + +I  GHAY A+N +++F   S  +YG  SR+ +D+ + G RV    
Sbjct: 114 ATQHIAEIIELTERLIARGHAYVASNGDVMFAIDSDADYGLLSRQDLDQLQAGARVEVDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCA-HDGPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLGY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGI-IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +         P  +   G   +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDPLATPDGGAEFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILGI--------EVCK 398
           + +D NT  A  AL  LARE    KN D+      +      A +LG+            
Sbjct: 346 MDDDFNTPEAYSALFDLAREVNRLKNEDMAAANAMAAELRKLAKVLGLLQQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    K K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIKQRNDARKSKDWALADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|150392183|ref|YP_001322232.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|187629786|sp|A6TWK5|SYC_ALKMQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149952045|gb|ABR50573.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 464

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 182/477 (38%), Positives = 252/477 (52%), Gaps = 60/477 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F  I+   +RMY CGPTVY++ HIGN R  IVFD L + L Y   + 
Sbjct: 1   MRLYNTLTRKKEVFVPIEQGKVRMYACGPTVYNYFHIGNGRTFIVFDALRKYLVYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII++A++E  S         I+ +   ++ KD   L        P+
Sbjct: 60  -VTFVQNFTDIDDKIIKKAQEEAVSAKE------ISERFIVEYFKDAATLGVDQADIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++P++I  IQ ++    AYE N ++ +D S   +YG  S++ ++E + G R+     
Sbjct: 113 VTENVPEIIAFIQELLEKNVAYEVNGDVYYDVSRFEDYGKLSKQNLEELQSGARIEVNEA 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DF+LWK + P EP WESPWG GRPGWHIECSAM+  YLG+  DIHGGG DL+FPH
Sbjct: 173 KRNSLDFVLWKTAKPGEPSWESPWGSGRPGWHIECSAMAKKYLGETIDIHGGGGDLVFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  C  +    AN WIH G+LN++ +KMSKS  NF T  E+ E        + 
Sbjct: 233 HENEIAQSEACTGKT--FANYWIHVGYLNIDNKKMSKSLDNFFTPREIAE-------EYD 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTSTSKGI 346
              +R  ML  HYR P++F+ + L  A+  L +                      T K  
Sbjct: 284 LESLRFFMLSAHYRTPVNFSRELLESAKSGLERLYNAKNHLEHILENTKVEEMKETEKEW 343

Query: 347 IDPAV-LSALYN-----DLNTVSAIQALHKLAR--------ESTKN-----HDLLPIFNA 387
           ID     S  +N     D NT   I  +  L R        E++K      + +L     
Sbjct: 344 IDSLTHYSEEFNRVMDDDFNTADGIAVIFDLVRDMNTYITGEASKEAVKAAYGMLVELTG 403

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +L  E  +E L+K I   IE   Q R+     K F+ +D IR  L+ KG +LED
Sbjct: 404 VLGLLRKE--EESLDKEIGRLIEARQQARI----EKNFTKSDEIRDYLKEKGIVLED 454


>gi|16759512|ref|NP_455129.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142716|ref|NP_806058.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56414312|ref|YP_151387.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161615258|ref|YP_001589223.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168239036|ref|ZP_02664094.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168240371|ref|ZP_02665303.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168465640|ref|ZP_02699522.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194442819|ref|YP_002039781.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194451708|ref|YP_002044570.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194734068|ref|YP_002113550.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197363232|ref|YP_002142869.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198241911|ref|YP_002214492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389934|ref|ZP_03216545.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|213162267|ref|ZP_03347977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213423442|ref|ZP_03356426.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213427916|ref|ZP_03360666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586100|ref|ZP_03367926.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213617481|ref|ZP_03372307.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647061|ref|ZP_03377114.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|289823986|ref|ZP_06543585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|21264006|sp|Q8Z8P6|SYC_SALTI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216133|sp|Q5PCE2|SYC_SALPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631630|sp|A9MW31|SYC_SALPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710850|sp|B5FLP7|SYC_SALDC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558785|sp|B4TA89|SYC_SALHS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558786|sp|B4SXP2|SYC_SALNS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558787|sp|B5BCZ8|SYC_SALPK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558788|sp|B4TN59|SYC_SALSV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|25293235|pir||AC0569 cysteinyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501804|emb|CAD05021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138347|gb|AAO69918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56128569|gb|AAV78075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161364622|gb|ABX68390.1| hypothetical protein SPAB_03027 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401482|gb|ACF61704.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194410012|gb|ACF70231.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194709570|gb|ACF88791.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631983|gb|EDX50503.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197094709|emb|CAR60239.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197288172|gb|EDY27557.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936427|gb|ACH73760.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199602379|gb|EDZ00925.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339820|gb|EDZ26584.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|322614796|gb|EFY11725.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618903|gb|EFY15791.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623610|gb|EFY20449.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629091|gb|EFY25870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631812|gb|EFY28566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637451|gb|EFY34153.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642135|gb|EFY38745.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645840|gb|EFY42361.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649781|gb|EFY46206.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653205|gb|EFY49538.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660646|gb|EFY56882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664798|gb|EFY60991.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669149|gb|EFY65299.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670695|gb|EFY66828.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322679067|gb|EFY75122.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682094|gb|EFY78119.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685076|gb|EFY81073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323193031|gb|EFZ78254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196887|gb|EFZ82029.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323203872|gb|EFZ88889.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207042|gb|EFZ91995.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323214431|gb|EFZ99182.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220129|gb|EGA04593.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226317|gb|EGA10529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230246|gb|EGA14366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233984|gb|EGA18073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238322|gb|EGA22380.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244009|gb|EGA28018.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246597|gb|EGA30571.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252160|gb|EGA36017.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323257792|gb|EGA41471.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261192|gb|EGA44784.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264876|gb|EGA48375.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272440|gb|EGA55847.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326622240|gb|EGE28585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 461

 Score =  308 bits (788), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
           + +D NT  A   L  +ARE    K  D+      ++H+  I      L +   +     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 408 ---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|194289323|ref|YP_002005230.1| cysteinyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|229558628|sp|B3R4D1|SYC_CUPTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|193223158|emb|CAQ69163.1| cysteine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 462

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 184/464 (39%), Positives = 253/464 (54%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    E 
Sbjct: 4   LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+NITDIDDKII RA      +   + I  +T++  Q   +D   L  + P H+PR
Sbjct: 63  -VTYVQNITDIDDKIIRRA------VENGETIGELTTRFIQYMHEDAAALGVIRPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ +I  +   G AY+A++ ++ +       YG  S + +++ + G RV    
Sbjct: 116 ATDYVPQMLDMIGKLEAKGLAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVSAND 175

Query: 184 HKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK    S P E  W+S WG GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCALLGEHFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +   N+W+HNGF+ +   KMSKS GNF TI E+L       +
Sbjct: 236 QFPHHENEIAQSEGASG-KPFVNLWMHNGFVRINDEKMSKSLGNFFTIREVL-------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
           ++ A V+R  +L  HYR P++++   L +A   L++             AV         
Sbjct: 288 AYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCAVDWDEPHAKR 347

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEH--LNKNIS 406
              A+ +D NT  A+  L  LA E  +             A  LG+     H  L    S
Sbjct: 348 FAEAMGDDFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQGGKS 407

Query: 407 I------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   IEKL+  R      + F+ AD IR QL   G +LED
Sbjct: 408 ADGPSPDEIEKLIAARKAAKAERNFAEADRIRAQLLEAGIVLED 451


>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 464

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 187/486 (38%), Positives = 262/486 (53%), Gaps = 53/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR M+VFDV+ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRHPGEVRMYVCGITVYDYCHVGHARMMVVFDVVQRWLRAL-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +TS+      +D   L    P H+
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIGSLTSRFIAAMHEDLDALGVARPEHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ +PQM+ +I+ +  +G+AY+A++ ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATDFVPQMLGMIETLEANGYAYQASDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK + P EP    W+S +GRGRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++   T+      D A L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSEVHLDDARASLTRL-YTALKDVTPDAAPLDRDEPH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHDLLPIF------NASAHILGIEVCKEHL 401
                +A+ +D NT  A+  L +LA E  +  +  P              L     + +L
Sbjct: 345 ARRFAAAMNDDFNTALAVSVLFELAGEVNRTRE--PALARQLKQLGGLLGLLGREPRAYL 402

Query: 402 NKNISI--------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            +            AIE  +  R+   + K ++ AD IR  L   G  LED   P     
Sbjct: 403 QQASGAASGALEAGAIEAQIAARVAAKQAKNYAEADRIRAALLEAGVALED--KPGG--- 457

Query: 454 MTRWKQ 459
           +T W++
Sbjct: 458 LTEWRR 463


>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 461

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII RA +        ++   +T++   +   D   L    P  +PR
Sbjct: 60  SLNYVRNVTDVDDKIIRRATEN------GESCDQLTARMLAEMHADFDSLLIERPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I + Q +I   HAY A+N +++F   S P YG  SR+ +D+ + G RV    
Sbjct: 114 ATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCA-HDGPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +     PA           A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDANAQPAGGEAFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A  AL  LARE    K  D+      +A       +LG ++   E   ++ 
Sbjct: 346 MDDDFNTPEAYSALFDLAREVNRLKGEDMAAANGLAAELRKLAKVLGLLQQEPEQFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+++R    K K ++ AD  R +L     +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIKQRNDARKAKDWALADAARDRLNEMSIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|229917379|ref|YP_002886025.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511833|sp|C4KZR7|SYC_EXISA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229468808|gb|ACQ70580.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 465

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 177/487 (36%), Positives = 265/487 (54%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN+L  K   F  I P  + MYVCGPTVY++ H+GNARP I FD + R L Y   E 
Sbjct: 2   IQLYNSLTNKKEPFVPIVPGKVSMYVCGPTVYNYIHVGNARPAIAFDTVRRYLTYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A +      + +    +T++  + ++ DT  L        PR
Sbjct: 61  -VKYVLNFTDVDDKIIRTANE------LGEDTETLTNRYIEAYLADTGALNVQPADVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ + ++I  I+ +   G AYE+  ++ F T     YG  S++ I++ + G+RV     
Sbjct: 114 VTDTMEEIIEFIRQLETEGFAYESEGDVYFRTKKFETYGKLSQQSIEDLRAGSRVDVGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM+  +LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMAKKHLGTTIDIHAGGHDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +   K AN W+HNGF+N+E  KMSKS GNF+ ++E L       +    
Sbjct: 234 HENEIAQSEACNHA-KFANYWLHNGFINIENEKMSKSLGNFLLVHEAL-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGI---------- 346
            V+R  ML  HYR PI+++ + + +A    S+  +         S + G+          
Sbjct: 286 MVLRFFMLSVHYRHPINYSRELIEQAANGWSRIKEAYQNIEYRLSVTAGLGEASESMERK 345

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLAREST----KNH-------DLLPIFNASAHIL 392
              I  + + ++ +D+NT +A+  L  LARE+      +H        +L +F+    +L
Sbjct: 346 LESIKASFIESMDDDINTANAVTVLFDLAREANIYAKADHVAKATLEQVLSLFDELTGVL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + +E   + +   I++L+QER      + F+ AD IR  L+ +   LED        
Sbjct: 406 GLTLAEE--KELLDAEIDQLIQERNDARAARNFARADEIRDLLKEQNIQLED------TA 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKR 464


>gi|306825734|ref|ZP_07459073.1| cysteine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432095|gb|EFM35072.1| cysteine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 447

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 178/469 (37%), Positives = 256/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMEDIIRFVTDLIEKGYAYESQGDVYFRVEKSHNYARLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGSGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      GI+D   L      
Sbjct: 286 -IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGIVDAGELQDFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
             + +  D N+ + I  + ++A+  ++ N+D  +     A   + GI   +E L+ +   
Sbjct: 345 FVAVMDEDFNSANGITVVFEMAKWINSGNYDASVKKSLAAMLEVFGIVFVEEVLDAD--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|187629811|sp|A1VDQ5|SYC_DESVV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 485

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 255/492 (51%), Gaps = 69/492 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+   F    P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ RN TD+DDKII+RA +E  +         +  K    F +D  RL  L    +P+
Sbjct: 60  -VTFARNFTDVDDKIIKRANEEGLTS------QQVAEKYIDTFYEDMDRLNVLRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L + +I  G AY   + ++ F   S P YG  S R ID+ + G RV    
Sbjct: 113 ATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS  ++    DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  A  ++K     W+HNGF+ ++  KMSKS GNF TI ++LE        +
Sbjct: 233 HHENEIAQTEAA--LDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILE-------GY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGI 346
              V+R  +L  HYR PIDFT   + EAE  L                SKW  T     +
Sbjct: 284 LPEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLARTERGRSKWSATPLPADV 343

Query: 347 ------IDPAVLSALYNDLNTVSA-------IQALHKL-----ARESTKNHDLLPIFNA- 387
                 +D A   AL +DLNT +A       I+ +++L      R+S +   LL   +  
Sbjct: 344 TAEFDTLDRAFDEALEDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGL 403

Query: 388 ---------------SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                           A +  ++ C+       +  ++ L++ER  +   K F+ AD IR
Sbjct: 404 VAKWMKVLGVFGREPEAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIR 463

Query: 433 KQLESKGFILED 444
            +L + G  + D
Sbjct: 464 DELAALGIEVRD 475


>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|61216191|sp|Q6D2E4|SYC_ERWCT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 461

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 181/482 (37%), Positives = 255/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHADQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA      I   +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNITDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A+N +++F   +   YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLITRRHAYVASNGDVMFSVDTASGYGVLSRQDLDQLRAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSCCA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGI-IDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +         P      G   +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDPSVEAHGGDEFEARFHDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE  +         + L       + +LG +E   E   +N 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDVQAANQLASTLRKLSGVLGLLEQDPEQFLQNG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +         IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVNDDEVKEIEALIQQRKDARATKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|282897582|ref|ZP_06305582.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197505|gb|EFA72401.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 488

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 191/506 (37%), Positives = 269/506 (53%), Gaps = 73/506 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R   EFQ ++P  +RMY CG TVYD+ H+G+AR  IV+DV+ R L +  G +
Sbjct: 3   LSIYNTLTRCQEEFQPVEPGQVRMYYCGVTVYDYCHLGHARACIVWDVVRRYLEFI-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RAR+E      N  +  +  +  Q + +D  RL        PR
Sbjct: 62  -VRYIQNFTDIDDKILNRARKE------NSTMETVAERYIQAYFEDMGRLGVREADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  LIQ++ + G+AY A+ ++ +   +   YG  S RK+ + + G   RV   
Sbjct: 115 ATHTMNGIKKLIQDLEVRGYAYAADGDVYYAVRNFNEYGKLSGRKLADLQAGASERVNIE 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KK+P DF LWK + P EP WESPWG+GRPGWHIECSAM    LG   DIH GG 
Sbjct: 175 DPEYQKKKDPFDFALWKAAKPCEPAWESPWGKGRPGWHIECSAMVRDRLGDTIDIHAGGA 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      +  AN W+HNG + ++G KMSKS GNF TI +LL+     
Sbjct: 235 DLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLS--------KWPQTST 342
            R      +RL +LM  YR+P+DFT + +  A        E LL          W   ST
Sbjct: 289 -RGVDPMALRLFVLMAQYRKPLDFTEEAILAATNGWHTLKEGLLFGYHHGGKLDWDLQST 347

Query: 343 SKGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------- 382
           ++ I D          +A+ +D N    +  + ++A+E  K  +++              
Sbjct: 348 NE-ITDIDQVEIEKFTTAVDDDFNFPGGLVVIFEIAKELRKEGNIIVHEGKTQTPSAELL 406

Query: 383 ---PIFNASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQ 434
                      +LG+ + K    K I  +     IE LVQ+R    K K F+ +D IR++
Sbjct: 407 TKWQTLVTLTRVLGL-IAKPEDQKTIDESLSDKVIENLVQKRQEARKAKDFAESDRIREE 465

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L++KG  L D K        TRW+++
Sbjct: 466 LKAKGITLIDSKEG------TRWQRE 485


>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|61216247|sp|Q72BQ5|SYC_DESVH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 485

 Score =  307 bits (787), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 186/492 (37%), Positives = 255/492 (51%), Gaps = 69/492 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+   F    P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ RN TD+DDKII+RA +E  +         +  K    F +D  RL  L    +P+
Sbjct: 60  -VTFARNFTDVDDKIIKRANEEGLTS------QQVAEKYIDTFYEDMDRLNVLRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L + +I  G AY   + ++ F   S P YG  S R ID+ + G RV    
Sbjct: 113 ATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS  ++    DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  A  ++K     W+HNGF+ ++  KMSKS GNF TI ++LE        +
Sbjct: 233 HHENEIAQTEAA--LDKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILE-------GY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGI 346
              V+R  +L  HYR PIDFT   + EAE  L                SKW  T     +
Sbjct: 284 LPEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATPLPADV 343

Query: 347 ------IDPAVLSALYNDLNTVSA-------IQALHKL-----ARESTKNHDLLPIFNA- 387
                 +D A   AL +DLNT +A       I+ +++L      R+S +   LL   +  
Sbjct: 344 TAEFDTLDRAFDEALEDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGL 403

Query: 388 ---------------SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                           A +  ++ C+       +  ++ L++ER  +   K F+ AD IR
Sbjct: 404 VAKWMKVLGVFGREPEAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIR 463

Query: 433 KQLESKGFILED 444
            +L + G  + D
Sbjct: 464 DELAALGIEVRD 475


>gi|327468352|gb|EGF13837.1| cysteine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 447

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 176/468 (37%), Positives = 251/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +A   L     T      G  D A L       
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         D+   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTSDIKAAFAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQVARGNRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|293364920|ref|ZP_06611637.1| cysteine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703173|ref|ZP_07640119.1| cysteinyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316370|gb|EFE56806.1| cysteine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623248|gb|EFO02239.1| cysteinyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 447

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 177/469 (37%), Positives = 256/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVSFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P+      +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PLE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + +++  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVTDLVEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +D   L      
Sbjct: 286 -LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQAFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+  D N+ + I  + ++A+  ++ N+D  +     A   + GI   +E L+ +   
Sbjct: 345 FVAAMDEDFNSANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDAD--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|109898207|ref|YP_661462.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109700488|gb|ABG40408.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 464

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 158/381 (41%), Positives = 225/381 (59%), Gaps = 27/381 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  +  S + +YVCG TVYD +H+G+AR  + FD++ R LR+   E 
Sbjct: 2   LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        +  S +T +       D   +  LAP  +PR
Sbjct: 61  -VNYVRNITDIDDKIIQRANEN------GETTSELTERTIAMMHDDFAAIGLLAPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+P++I +I+ +I  GHAY+A + +++FD SS  +YG  S++ +D+  MG+RV    
Sbjct: 114 VTTHMPEIIAIIERLIQRGHAYQAKSGDVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DLIFP
Sbjct: 174 DKDDPMDFVLWKTAKPGEPSWQSPWGDGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H G + ++  KMSKS GNF T+ ++L+          
Sbjct: 234 HHENEVAQSCCA-YDTPYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVLQQHD------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALY------ 356
           A  +R  ++  HYR  + ++   +T+A   L + +      K      + SA Y      
Sbjct: 286 AETLRYFLMSAHYRSQLSYSQSNITQARSALERLYTSLRDVKANTQVDMHSADYLTRFDK 345

Query: 357 ---NDLNTVSAIQALHKLARE 374
              +D NT  A+  L  +A+E
Sbjct: 346 AMDDDFNTPEAMAVLFDVAKE 366


>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 465

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 267/487 (54%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF  +D   ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKIFNTMTREKEEFVPLDSDEVKMYVCGPTVYNFFHIGNARTFVVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A+ EH ++        +  K  +++ KD   L     T  PR
Sbjct: 60  -VRFVQNFTDIDDKMIKKAQDEHITV------KELGDKFIKEYYKDADALHIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  I ++I   +AYE + ++ F T    NYG  S + ID+ + G R+     
Sbjct: 113 ATLYITKIIEFIGDLIDRDYAYEIDGDVYFSTKKFSNYGKLSGQNIDDLRAGARIDVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+   LG+  DIH GG DL+FPH
Sbjct: 173 KKDPMDFAVWKGQKPGEPAWESPWGMGRPGWHIECSCMAHDLLGETIDIHAGGSDLMFPH 232

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    R  KT A  W+H+ F+N+  +KMSKS  NF T+ E+LE        + 
Sbjct: 233 HENEIAQS--EGRTGKTFARYWMHSAFVNVNNQKMSKSLNNFFTVREILE-------KYE 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIID-------------- 348
             VIR+ ML  HYR  I+F+++ L   +  L +   + T+ + ++D              
Sbjct: 284 PDVIRMFMLSGHYRTQINFSMELLDSTKSALDRLYNSITNLENLLDNKEDIPISENEKEY 343

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARE---STKNHDLLPIFNASAHI---LG- 393
                      +  + +D NT  AI  +  L ++   S      + +   S ++   LG 
Sbjct: 344 RNKLGKYKQRYIEKMDDDFNTADAISVIFDLVKDINVSINKDSSVEVIRDSLNLIRELGA 403

Query: 394 -IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            + + ++    +I   IE L+++R I    K ++ +D IR  L+++G +LED   P+   
Sbjct: 404 PLGILQQSKRGSIEKEIEALIEKRQIARSEKNWALSDKIRDDLKAQGIVLED--TPEG-- 459

Query: 453 RMTRWKQ 459
              RWK+
Sbjct: 460 --VRWKR 464


>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|187631637|sp|A8H617|SYC_SHEPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 459

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 257/483 (53%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  +F  + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +   S         +T +   +  +D   L    P ++PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANENKESC------DSLTERLIAEMHRDFDALNMARPDNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   HAY A+N +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATLHMPEIIEMVEKLIEREHAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------ 351
           A  +R  +L  HYR  ++++   L +A+   S   +  T+   +D  V            
Sbjct: 286 ATTVRYFLLSGHYRSQLNYSEDNLKQAK---SGLERIYTALKDLDLTVEAAPAEEFVAKF 342

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
            SA+ +D NT  A   L  + RE          K   L       A +LGI         
Sbjct: 343 KSAMDDDFNTPEAYSVLFDMVREINRLKATDMAKASALGVALKQLADVLGILGQDVDTFF 402

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K   N +    IE L+ ER      K + +AD  R  L + G ILED      G   T W
Sbjct: 403 KGEGNDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTW 456

Query: 458 KQK 460
           ++K
Sbjct: 457 RKK 459


>gi|325697466|gb|EGD39352.1| cysteine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 450

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 176/472 (37%), Positives = 253/472 (53%), Gaps = 39/472 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
             PR  + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 QHPRVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL--- 352
                   V+R      HYR+PI+FT + + +A   L     T      G  D A L   
Sbjct: 291 ------GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVF 344

Query: 353 -----SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                +A+  D N  + I  + +LA+         D+   F     + GI   +E L+ +
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTADIKAAFAELLEVFGIVFVEEVLDAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 405 ----IERLIEERQVARGNRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 449


>gi|198283982|ref|YP_002220303.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665072|ref|YP_002426619.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248503|gb|ACH84096.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517285|gb|ACK77871.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 462

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 187/484 (38%), Positives = 263/484 (54%), Gaps = 58/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++TL R  T  + + P+++ +YVCG TVYDF H+G+AR M+ FD + R LR    E 
Sbjct: 7   VTLFDTLRRSKTPLEVLRPNHVGLYVCGMTVYDFCHLGHARVMVTFDTVVRYLRERGYE- 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA      +   ++I  +T++      +D   L C  P  +PR
Sbjct: 66  -VTYVRNITDIDDKIIRRA------LECGESIQSLTARFIDAMHEDEAALLCRRPDLEPR 118

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  M  LI  +I  GHAY  AN ++ +   S P YG  S + IDE   G RV    
Sbjct: 119 ATEHVGAMQTLIGELIHRGHAYVAANGDVYYAVRSFPEYGRLSGKSIDELTSGARVEVGE 178

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W S WG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 179 EKRDPLDFALWKAAKPGEPSWPSAWGEGRPGWHIECSAMSADALGCAFDIHGGGADLQFP 238

Query: 244 HHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           HHENEIAQS    CA      A+ W+HNGF+ +   KMSKS  NF T+ ELL   ++ G 
Sbjct: 239 HHENEIAQSQGAGCA-----FAHYWMHNGFVRINDEKMSKSLNNFFTVRELL--PRYSGE 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
                V+R  +L +HYR P+++    L +A   L++    +  +G+  P ++        
Sbjct: 292 -----VLRFFILSSHYRSPLNYAEDALEQARAGLTRL--YTALRGMPRPKIVAEMGSEWR 344

Query: 353 ----SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI-----E 395
               +A+ +D +T +A+  L  LARE  +  D        L  +    A +LG+     E
Sbjct: 345 ERFHAAMSDDFHTPAALAVLFDLARELNRLRDEGSEVAAPLATLLRELAGVLGLLQQDAE 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 + ++S  I+  +  R    + + F+ AD IR++L + G ILED      G   T
Sbjct: 405 GFLRGHDADVSW-IDGRIAARAAARQARDFAGADAIRQELTAAGVILED------GPGGT 457

Query: 456 RWKQ 459
            W++
Sbjct: 458 TWRR 461


>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 487

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 179/494 (36%), Positives = 257/494 (52%), Gaps = 73/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K  +F  I P  +++Y CG TVYD+ H+G+ R +IVFD++ R LRY     
Sbjct: 3   LKIYNTLTGKKEDFAPIKPPQVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII RA+ E   +P     ++I+ K  +++  D  +        +PR
Sbjct: 61  NVIFVRNFTDVDDKIINRAKNE--CVPF----TVISDKYIKEYFDDAEKFRIEPADIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP +I  IQ +I  G+AYE + ++ F      +YG  S+R IDE   G R+     
Sbjct: 115 VTTHIPDIIKFIQELIDKGYAYEVDGDVYFSVRKFKDYGKLSKRSIDELLAGARIEPGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK +   EP WESPWG+GRPGWH EC AM   +LG+  DIHGGGLDL FPH
Sbjct: 175 KKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  WIHNG + + G+KMSKS GN++T+ E+          +  
Sbjct: 235 HENEIAQAESLTG-KPFARYWIHNGLVTVNGQKMSKSLGNYVTLKEIYS-------KYEP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI-------------LLSKWPQTS-------TSK 344
            ++RL +L  HYR P+DF+  ++ E +              +L K P          T  
Sbjct: 287 DILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIQEYEILQKLPTDENFEEDLYTEI 346

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAR--------------------ESTKN------ 378
                   SA+ +D NT  A+ +L  L R                    +S K       
Sbjct: 347 QKAQSGFYSAMSDDFNTPEALASLFGLVRQMNILKDKAIKQGGISKKALQSYKEAADTLH 406

Query: 379 ---HDLLPIFNA-----SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
               D+  +F++         + +E  +E L++++   I  L++ R    K K+FS AD 
Sbjct: 407 NICRDIFGLFDSLQPCVKTEEIKVEKQEEKLDEDL---INILIEVRDKARKEKQFSIADT 463

Query: 431 IRKQLESKGFILED 444
           IR +L  KG ++ED
Sbjct: 464 IRDKLAEKGIVIED 477


>gi|218290036|ref|ZP_03494203.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239870|gb|EED07058.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 474

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 179/477 (37%), Positives = 248/477 (51%), Gaps = 53/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YN+L  K    Q ++P  +R Y CGPTVY F H+GNAR  +VFD + R L Y   E 
Sbjct: 3   IVLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLEYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDD+II+RA++      +  +   +  +N + + +D  +L     T  PR
Sbjct: 62  -VLFVQNFTDIDDRIIQRAQE------LGISPRELAEENIRYYFEDAGKLFIRPATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  IQ++I  GHAYE N  + FDTSS P YG  S +  ++ + G R+  +  
Sbjct: 115 VTECVDDIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQDE 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK + P E  W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 175 KDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG LN+ G KMSKS GNFI   +LLE +         
Sbjct: 235 HENEIAQSE-AHSGKTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERRD-------P 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------------------W 337
             +R  +L  HYR P+++T + L +AE  LS+                            
Sbjct: 287 RAVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMRGALDRADEV 346

Query: 338 PQTSTSKGI--IDPAVLSALYNDLNTVSAIQALH--------KLARESTKNHDLLPIFNA 387
           P T     +  I  A + A+ +D NT   + A+         +L        DL    + 
Sbjct: 347 PSTQGRSDVEQIRSAFIQAMDDDFNTADGMAAIFDGVRLVNTRLEEGGVTLGDLHLYRDL 406

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +LG+    +   + +   IE+L+ ER    K + F+ AD IR QL  +G +LED
Sbjct: 407 FVELLGVLGIPKKEEERLEDEIERLIAERAEARKRRDFARADEIRDQLRHRGIVLED 463


>gi|306829040|ref|ZP_07462231.1| cysteine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428845|gb|EFM31934.1| cysteine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 447

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 179/469 (38%), Positives = 255/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+ S ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDSKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       I  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----IADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMEDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID--------PA 350
                V+R      HYR+PI+FT + + +AE  L     T      G +D          
Sbjct: 286 -LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDIQELQDFKDK 344

Query: 351 VLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
            ++A+  D N  + I  + ++A+  ++ N+D  +     A   + GI   +E L+     
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IETLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|242240078|ref|YP_002988259.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242132135|gb|ACS86437.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 461

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 177/487 (36%), Positives = 263/487 (54%), Gaps = 58/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDMVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        + I+ +T +   +   D   L  L+P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIKRAAEN------GETIAQLTDRMIAEMHADFASLNILSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I   HAY A N +++F   + P YG  SR+ +++ K G RV    
Sbjct: 114 ATHHIAEIIELVEKLIARRHAYVAENGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEIAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKLNEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGEYV-NYWMHTGMVMVDREKMSKSLNNFFTVRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKG--IIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +         ++++  G    +    +A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDESASPAGGEAFEARFCTA 345

Query: 355 LYNDLNTVSAIQALHKLARE------------------STKNHDLLPIFNASAHIL---G 393
           + +D NT  A   L  +AR+                    +   +L +      +    G
Sbjct: 346 MDDDFNTPEAYSVLFDIARDINRLKAEDAAAANALAAELRRLAGVLGLLEQDPELFLQSG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            + C + + +     I+ L+++R    + K +++AD  R +L   G +LED      G +
Sbjct: 406 AQPCDDEVQE-----IDALIKQRNDARQSKDWAAADAARNRLTDMGIVLED------GPQ 454

Query: 454 MTRWKQK 460
            T W++K
Sbjct: 455 GTIWRRK 461


>gi|325829816|ref|ZP_08163274.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487983|gb|EGC90420.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 501

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 188/517 (36%), Positives = 265/517 (51%), Gaps = 86/517 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT  R   +F+ ++   + MYVCGPTVY++ HIGNAR  I FDV+ R L +   + 
Sbjct: 2   IRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII ++ +E  S       + + ++ T+ F++D      L P  +P+
Sbjct: 61  -VTFVQNVTDVDDKIIGKSLEEGRSA------AEVAAEYTEAFIEDMRAAGVLDPDIRPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
           AT  IP MI LIQ +I  GHAY+A+ ++ F+  S P YG  S R +DE + G R      
Sbjct: 114 ATEEIPAMIELIQELIDGGHAYDADGDVYFNVRSFPAYGELSGRNVDEMESGHRELRADG 173

Query: 182 ---KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              +  K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FDIHGGG 
Sbjct: 174 KGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGWHIECSAMSRKYLGLPFDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQS  A      AN W+H G L +   KMSKS GNF  + ++L+     
Sbjct: 234 DLVFPHHENERAQSEAACGC-TFANYWMHGGMLQINSEKMSKSLGNFKLLRDVLKVTD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP 349
                  V+R  ML THYR P+DF+ +RL EA   L +         W Q   ++ I  P
Sbjct: 291 -----PKVLRFLMLQTHYRSPLDFSDERLAEAGAALCRIENAVKNLDW-QLQNAQDIPSP 344

Query: 350 ---------------AVLSALYNDLNTVSAIQALHKL--------ARESTKNHDLLPIFN 386
                          A + A+ +D NT  A+  +           A ++    D+ P+ +
Sbjct: 345 LDTRELMKRTKEAKLAFILAMDDDFNTCKALGEVFDFVAAVNAQTADKTISLSDVPPVRD 404

Query: 387 ASA------HILGIEV----------------------CKEHLNKNISIAIEKLVQERLI 418
           A         + GI+V                         +   + + A++ L+  R  
Sbjct: 405 ARGVIVELMGVFGIDVEAASASCAAGGYPPEVVGLAADIAGYEGADAAEAVDALLAARAD 464

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
               K +S AD +R  L   GF++ED      G R+T
Sbjct: 465 ARAAKDWSRADAVRDGLCGLGFVIEDTP---QGARVT 498


>gi|251771305|gb|EES51886.1| cysteinyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 485

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 187/499 (37%), Positives = 256/499 (51%), Gaps = 58/499 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I +YN+L RK+  F    P  ++MYVCG TVYD  H+G+AR  +VFD L+RL    
Sbjct: 1   MPPSISLYNSLSRKVEPFIPQTPGEVKMYVCGVTVYDDCHLGHARSQMVFDTLHRLF-LE 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            G + V YVRNITDIDDKII +A +    +PI +    IT    + F +D  RL  L+P 
Sbjct: 60  TGHR-VRYVRNITDIDDKIIRKAAEA--GVPIEN----ITRTFIESFSRDMGRLGILSPE 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT  +  M+ LI  ++  G AY +  ++ F   S   YG  S + +++ + G R+ 
Sbjct: 113 REPRATEFLDSMVALIDRLLSLGSAYRSGGDVYFRVRSFSGYGGLSHQILEDLRSGARIE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK + P EP + +P+G GRPGWHIECSAMS HYLG   D+HGGG+DL
Sbjct: 173 PGEEKEDPLDFVLWKGAKPGEPSYPAPFGPGRPGWHIECSAMSLHYLGPTLDLHGGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG-- 298
           +FPHHENE AQS  A   +  A  W+HNGF+     KMSKS GN   I    E   F   
Sbjct: 233 LFPHHENERAQSEAATG-QTFARTWMHNGFVTTSQEKMSKSLGNTRRIRAFFEDSPFPEA 291

Query: 299 -GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---------------EILLSKWPQTST 342
             R W    +R   L THYR P+DFT   L  A               E L ++ P+   
Sbjct: 292 VTREW----LRYFFLGTHYRSPVDFTEGGLASAKNALDGLHQCRALLLECLSAEAPEGDP 347

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHK--------LARESTKNHDLLP-----IFNASA 389
             G +  + + AL +DL+T  A+  LH         LA   + +  + P     +F+ + 
Sbjct: 348 IAGPLLSSFMEALSSDLDTPVALSVLHGAKSRINPWLASGGSGSPPVDPREVRALFSLAG 407

Query: 390 HILGIEVCKEH-----------LNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLES 437
             LGI                   + +S   IE+LV  R    K + F  AD +R QL +
Sbjct: 408 RTLGILTTDPSSWIGGEGRDGGGGEGLSPEEIERLVHLREEARKARDFKQADALRDQLRA 467

Query: 438 KGFILEDYKNPDNGQRMTR 456
            G +LED   P    R+ R
Sbjct: 468 AGVVLED--QPGGPPRIRR 484


>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 483

 Score =  307 bits (786), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 189/488 (38%), Positives = 259/488 (53%), Gaps = 66/488 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +K+YNTL ++  EF+ +    ++MYVCGPTVYD+ H+G+AR  I FDV+ R L +  
Sbjct: 5   KNMLKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEH-- 62

Query: 62  GEKCVTYVRNITDIDDKIIERARQ--EHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
               V  V N TDIDDKII+RAR+  E P       I I        F++D   L     
Sbjct: 63  KGYTVLMVMNFTDIDDKIIKRARETGEDPKELAERFIKI--------FLEDMEALKVKPA 114

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
              PR T+HI  +I  I  +   G+AYE ++ I F+    P YG  S  KI++ + G RV
Sbjct: 115 DIYPRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARV 174

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG D
Sbjct: 175 EPGEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGND 234

Query: 240 LIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           LIFPHHENEIAQS  C     +    W+H GF+ ++G KMSKS GNF+TI ELL      
Sbjct: 235 LIFPHHENEIAQSEACFGH--EWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKG 345
            + +   VIR  +L  HYR P+++T + L  A+  L +   T             S + G
Sbjct: 287 -KRYEPEVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWG 345

Query: 346 IID-----------PAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHD-----LL 382
            ++                A+ +D NT  A++A+ ++A        E+ K  +      L
Sbjct: 346 ELEFKTYEIIREGKRKFYEAMDDDFNTAEALKAVFEVANAINKYLTEANKPKESILRKAL 405

Query: 383 PIFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLE 436
             F   + + G  V +++  +           IE LV+ R  L K K++  AD IR++L+
Sbjct: 406 EFFKIVSEVFG--VFEDYFREETKEREESEKLIELLVEVRKQLRKEKRYELADMIREELK 463

Query: 437 SKGFILED 444
             G  LED
Sbjct: 464 KLGIQLED 471


>gi|331003582|ref|ZP_08327079.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412423|gb|EGG91814.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 469

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 194/493 (39%), Positives = 260/493 (52%), Gaps = 63/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL RK  EF  I+   ++MYVCGPTVY+  HIGNARPMI FD + R   Y   + 
Sbjct: 1   MKIFNTLSRKKEEFVPIEEGKVKMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E          S+I+++   +  KD   +  L  T  P 
Sbjct: 60  -VNYVSNFTDVDDKIINKAIEEGVEA------SVISTRYIDECKKDMEAMNVLPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M  +I ++I  GHAY A +  + F   S  +YG  S + IDE + G R   V 
Sbjct: 113 ATEEIDGMEEMIGSLIEKGHAYVAKDGTVYFRVKSFEDYGKLSHKNIDELQSGFREIKVK 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++  DF+LWK     EP W+SPW +GRPGWHIECS MS  YLG   DIHGGG DL
Sbjct: 173 GEEDKEDSNDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  AN W+HN FLN++ +KMSKS GNF T+ ++ E       
Sbjct: 233 IFPHHENEIAQSESASG-KSFANYWMHNAFLNIDNKKMSKSLGNFFTVRDISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA-----EILLS-----KWPQTSTSKGIIDPA 350
            +   V+R  ML  HYR P++F+ + L EA     E +L+     K  Q   +   I  A
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAE-LMEASKNSLERILTGVENIKDVQKRNNADAITDA 343

Query: 351 VLS--------------ALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFN 386
            LS              A+ +D NT  AI A+ +L + S  +          + LL I  
Sbjct: 344 ELSNLEIAKVLKDKFVIAMDDDFNTADAITAIFELIKLSNTSLNEKSTVEYANGLLNIIL 403

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                LGI    E   + +   IE L+++R    K K F+ AD IR +L   G +LED +
Sbjct: 404 PLCDTLGI--ITERKVEILDSEIEDLIEQRTSARKNKDFALADKIRNELLEMGIVLEDTR 461

Query: 447 NPDNGQRMTRWKQ 459
                    +WK+
Sbjct: 462 EG------VKWKR 468


>gi|222111282|ref|YP_002553546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254781677|sp|B9MAU5|SYC_DIAST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221730726|gb|ACM33546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 458

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/391 (42%), Positives = 227/391 (58%), Gaps = 36/391 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + EF  I+P ++RMYVCG TVYD  H+G+AR MI FDV+ R LR      
Sbjct: 3   LRIYNTLSRALEEFSPIEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRA--SGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I  +T +      +D   L    PTH+PR
Sbjct: 61  AVTYVRNITDIDDKIIKRAVEN------GETIRSLTDRMIDALHQDADALGIERPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  + 
Sbjct: 115 ATAYVPQMLDMIGTLQGKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAVQD 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK + P EP    W SP+G GRPGWHIECSAM    LG+ FDIHGGG DL
Sbjct: 175 GKHDPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A +W+HNGF+N++  KMSKS GNF TI ++L       +
Sbjct: 235 QFPHHENEIAQSEGATG-KPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  +R  ++ +HYR P++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 EYDAETVRFFVVRSHYRSPLNYSNVHLDDARAALKR---LYTALSLVAPAPVEVDWAEGY 343

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKN 378
                +A+  D  T  A+  L  LA E  ++
Sbjct: 344 AARFKAAMDEDFGTPEAVAVLFDLAGEVNRS 374


>gi|324996026|gb|EGC27937.1| cysteine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 447

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 179/468 (38%), Positives = 253/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PKE-----VADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +A   L     T      G  D A L       
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
            SA+  D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TSAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQMARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|156974130|ref|YP_001445037.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156525724|gb|ABU70810.1| hypothetical protein VIBHAR_01842 [Vibrio harveyi ATCC BAA-1116]
          Length = 460

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 182/483 (37%), Positives = 263/483 (54%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +++ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+     PA          
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDLNAAPAGGEEYVSRYT 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCK 398
           +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI         K
Sbjct: 344 AAMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLK 403

Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W
Sbjct: 404 GDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTW 457

Query: 458 KQK 460
           ++K
Sbjct: 458 RRK 460


>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511839|sp|C6DAX2|SYC_PECCP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 461

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 179/482 (37%), Positives = 256/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA +        +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRAAEN------GETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A+N +++F   + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHITDIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSSCA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGI-IDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +         P  +   G   +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYTALRGTDPDAAAQGGDEFEGRFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE  +         + L       + +LG +E   E   +N 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAQAANQLASALRKLSGVLGLLEQDPEQFLQNG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +         IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDNDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|269837621|ref|YP_003319849.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786884|gb|ACZ39027.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 468

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 183/474 (38%), Positives = 247/474 (52%), Gaps = 52/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +T   +   F+ I+P  +RMYVCGPTVYD AHIG+A   IVFDVL R L Y  G +
Sbjct: 3   LRLTDTRTGEQRPFEPIEPGVVRMYVCGPTVYDDAHIGHAMSAIVFDVLRRYLEYS-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + + +N TD+DDKII+RA        +      +  +  + +++DT RL     T  PR
Sbjct: 62  VI-HAQNFTDVDDKIIQRA------ATLGIEPRELAERLIEDWLRDTARLNVKPATIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  +I +I+ +I  GHAY     ++ F   S P YG  S R +DE   G R+    
Sbjct: 115 ATQEIDTIIEMIKGLIAEGHAYAVEGGDVFFRVDSFPGYGKLSHRSLDEMMAGARIEVDP 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK + P EP W+SPWG GRPGWHIECSAM   +LG   DIHGGG DLIFP
Sbjct: 175 RKENPMDFALWKGAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGDRIDIHGGGADLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      E  A  W+HNG L L G KMSKS GN ITI ELLE          
Sbjct: 235 HHENEIAQSEAFTDQEPLARFWVHNGLLQLGGEKMSKSLGNLITIRELLERGD------- 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
               R  +L +HYR P+ F+ + +  A   L++    S  +G  DPA             
Sbjct: 288 GEAFRFLVLSSHYRSPLTFSDEAMDSARRGLARL--QSAVRG-FDPATAPATAPDHALAR 344

Query: 353 ----------SALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHIL 392
                     +A+ +DLNT  A+  L +LAR   +  D             +    A +L
Sbjct: 345 IADETRAEFRAAMDDDLNTPVALSHLFELARAINRERDAGAPAAAVAYAQSVLKELAGVL 404

Query: 393 G--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G  +E   +  ++ I   ++ L++ R  L K + +  AD IR +L   G  +ED
Sbjct: 405 GLTLETTTQRTDEAIEPFVDLLLEVRAELRKQRLWDLADRIRVRLGELGIRVED 458


>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 460

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 259/482 (53%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYVGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LKFVRNITDIDDKIIKRANEN------GESCESLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATEFIAEIIELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGARVDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L+        + 
Sbjct: 234 HHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLD-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------VLS 353
              +R  ++  HYR  ++++   L +A   L +   TS     +D              +
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLNQARSALERL-YTSLRGLDLDAEPTGGEEYVTRFTA 344

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT  A   L  +ARE  +           L  +    A ++GI         K 
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKTVDLGQASQLGALMRELADVIGILHQDPEAFLKG 404

Query: 400 HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               N  +A IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 405 DAGDNDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWR 458

Query: 459 QK 460
           +K
Sbjct: 459 RK 460


>gi|257791977|ref|YP_003182583.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317489986|ref|ZP_07948478.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|257475874|gb|ACV56194.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316910984|gb|EFV32601.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 501

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 188/517 (36%), Positives = 264/517 (51%), Gaps = 86/517 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT  R   +F+ ++   + MYVCGPTVY++ HIGNAR  I FDV+ R L +   + 
Sbjct: 2   IRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII ++ +E  S       + + ++ T+ F++D      L P  +P+
Sbjct: 61  -VTFVQNVTDVDDKIIGKSLEEGRSA------AEVAAEYTEAFIEDMRAAGVLDPDIRPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
           AT  IP MI LIQ +I  GHAY+A+ ++ F+  S P YG  S R +DE + G R      
Sbjct: 114 ATEEIPAMIELIQELIDGGHAYDADGDVYFNVRSFPAYGELSGRNVDEMESGHRELRADG 173

Query: 182 ---KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              +  K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FDIHGGG 
Sbjct: 174 KGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGWHIECSAMSRKYLGLPFDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQS  A      AN W+H G L +   KMSKS GNF  + ++L+     
Sbjct: 234 DLVFPHHENERAQSEAACGC-TFANYWMHGGMLQINSEKMSKSLGNFKLLRDVLKVTD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP 349
                  V+R  ML THYR P+DF+ +RL EA   L +         W Q   ++ I  P
Sbjct: 291 -----PKVLRFLMLQTHYRSPLDFSDERLAEAGAALCRIENAVKNLDW-QLQNAQDIPSP 344

Query: 350 ---------------AVLSALYNDLNTVSAIQALHKL--------ARESTKNHDLLPIFN 386
                          A + A+ +D NT  A+  +           A  +    D+ P+ +
Sbjct: 345 LDTRELMKRTKEAKLAFILAMDDDFNTCKALGEVFDFVAAVNAQTADRTISLSDVPPVRD 404

Query: 387 ASA------HILGIEV----------------------CKEHLNKNISIAIEKLVQERLI 418
           A         + GI+V                         +   + + A++ L+  R  
Sbjct: 405 ARGVIVELMGVFGIDVEAASASCAAGGYPPEVVGLAADIAGYEGADAAEAVDALLAARAD 464

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
               K +S AD +R  L   GF++ED      G R+T
Sbjct: 465 ARAAKDWSRADAVRDGLCGLGFVIEDTP---QGARVT 498


>gi|270293221|ref|ZP_06199432.1| cysteine--tRNA ligase [Streptococcus sp. M143]
 gi|270279200|gb|EFA25046.1| cysteine--tRNA ligase [Streptococcus sp. M143]
          Length = 450

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 179/473 (37%), Positives = 256/473 (54%), Gaps = 41/473 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T
Sbjct: 61  GYE--VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
             PR    +  +I  ++++I  G+AYE+  ++ F      NY   + + +++ ++G    
Sbjct: 113 RHPRVVEFMADIIRFVEDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGR 172

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKTAKTGEISWDSPWGAGRPGWHIECSVMSTGILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T  
Sbjct: 233 ADLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT-- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL-- 352
                    V+R      HYR+PI+FT + + +AE  L     T      G +D   L  
Sbjct: 289 -----IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDAQELQD 343

Query: 353 ------SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNK 403
                 +A+  D N  + I  + ++A+  ++ N+D  +     A   + GI   +E L+ 
Sbjct: 344 FKDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDA 403

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 404 E----IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 449


>gi|153952840|ref|YP_001393605.1| cysteinyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853505|ref|YP_002470627.1| hypothetical protein CKR_0162 [Clostridium kluyveri NBRC 12016]
 gi|187629803|sp|A5N4M6|SYC_CLOK5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765185|sp|B9DY88|SYC_CLOK1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146345721|gb|EDK32257.1| CysS [Clostridium kluyveri DSM 555]
 gi|219567229|dbj|BAH05213.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 465

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 182/489 (37%), Positives = 258/489 (52%), Gaps = 59/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NT+ R+  EF  + P  I+MYVCGPTVY+F HIGNAR  +VFD + R   Y  G K
Sbjct: 1   MRIFNTMTRRKEEFVPLIPGEIKMYVCGPTVYNFFHIGNARTFVVFDTVRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A  E      N  +  +  +   ++ +D   L     T  PR
Sbjct: 60  -VNFVQNFTDIDDKMIKKANDE------NITVQQLGDRFIDEYYRDADALNIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  IQ++I  G+AY  + ++ F+     NYG  S + I++ + G R+     
Sbjct: 113 ATLYISKIIEFIQDLIDKGYAYSVDGDVYFNAKKFNNYGKLSGQNIEQLQSGARIDIDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF +WK     EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKNPMDFAVWKSEKKGEPSWESPWGMGRPGWHIECSCMAYNILGETIDIHAGGSDLKFPH 232

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    R  K  A  W+H+ F+N+  +KMSKS  NF T  E+L+        + 
Sbjct: 233 HENEIAQS--EGRTGKVFAKYWMHSAFVNINNQKMSKSLNNFFTTREILD-------KYE 283

Query: 304 APVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIIDPAV-- 351
             VIRL ML  HYR PI+F+++          R+  + I L +      + GI+D  +  
Sbjct: 284 PDVIRLFMLSGHYRTPINFSIELLDSTKSALDRICNSIINLEELSSKVKNDGILDSEIKY 343

Query: 352 -----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                      +  + +D NT  AI  +  L R+   N D           L +      
Sbjct: 344 KEHLNSYKQRYIEKMDDDFNTADAISVIFDLIRDINTNIDENSSMEIIKYSLALIRELGS 403

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            LGI   ++    +I   +E L+++R    K K ++ AD IR  L+ KG ILED  +   
Sbjct: 404 PLGI--LQKSKRGSIETEVELLIEKRQKARKDKNWALADKIRDDLKDKGIILEDTSDG-- 459

Query: 451 GQRMTRWKQ 459
                RWK+
Sbjct: 460 ----VRWKR 464


>gi|320162457|ref|YP_004175682.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319996311|dbj|BAJ65082.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 468

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 187/473 (39%), Positives = 257/473 (54%), Gaps = 47/473 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   F+ ++P  +RMYVCGPTVY+ AH+G+A   +VFD++ R L Y   + 
Sbjct: 3   LKIYNTLTRKKEPFETLEPGKVRMYVCGPTVYNKAHVGHAMSALVFDIIRRYLEYRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +  N TD+DDKII RA Q     P   A + I     Q++ K+   L  L  T  PR
Sbjct: 62  -VKHAMNYTDVDDKIILRASQLGMD-PFALAETYI-----QEYRKNLEDLNVLPATINPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I Q+I +IQ +I  G+AY A N ++ F  +   +YG  S RK+DE + G R+    
Sbjct: 115 ATQEIDQIIAIIQGLIEKGYAYPAPNGDVYFRVTRDEDYGRLSGRKLDEMQAGARIEVGE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+ H+LG+  DIHGGG DLIFP
Sbjct: 175 QKEHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMNLHHLGEQIDIHGGGNDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      +  A  W+HNG L   G KMSKS GN +TI E L           
Sbjct: 235 HHENEIAQSESYTG-KPFARYWVHNGMLQFGGEKMSKSLGNLVTIEEFLARHD------- 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDPAVLS----- 353
           A V+RL +L + YR P+ F    + + E  L +      P    + GI   AV +     
Sbjct: 287 ADVLRLMVLNSGYRAPLTFNDDVIEQTERALERLKSALRPALPGAAGISAEAVKALEEQA 346

Query: 354 ---------ALYNDLNTVSAIQALHKLAR-------ESTKNHDL---LPIFNASAHILGI 394
                    A+ +D NT  A+  L +L R       E   +  L     +    A +LG+
Sbjct: 347 RAARAGFEEAMDDDFNTAGALSHLFELVRAINSARTEGATDEQLRVGQDVLRELAGVLGL 406

Query: 395 EV-CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  +E   +  +  I+ L++ R  L K K ++ +D IR +L + G  LED +
Sbjct: 407 RLRMEEEKPQEAAPFIDLLIEVRTELRKQKLWALSDLIRDRLTALGVTLEDTR 459


>gi|224369425|ref|YP_002603589.1| CysS2 [Desulfobacterium autotrophicum HRM2]
 gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
          Length = 477

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 188/496 (37%), Positives = 259/496 (52%), Gaps = 65/496 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R    F  ++ + ++MYVCGPTVYD +HIG+AR ++VFDV++R LR+   + 
Sbjct: 3   LRIYNTQTRTKETFIPLEKNKVKMYVCGPTVYDTSHIGHARSVVVFDVVFRWLRHSGYDV 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
           C  YVRN TD+DDKII RA +      +      I+ +  ++F  +   L  L PT +P+
Sbjct: 63  C--YVRNFTDVDDKIINRANE------LGQDPKEISERYIKEFHNEMDALNVLRPTIEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I  IQ +I  G AY    +++ F   S   YG  S R  D+   G+R+    
Sbjct: 115 ATEHIQDIIDFIQRLIDKGKAYHVPGSDVFFSIQSFDEYGKLSGRNPDDMMPGSRIAVDD 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK   P EP W SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLIFP
Sbjct: 175 KKRDPKDFTLWKPVKPGEPSWPSPWGDGRPGWHIECSAMSYKYLGESFDIHGGGKDLIFP 234

Query: 244 HHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQS  A    KT    WIHNGF+++   KMSKS GNF  I ++L       + +
Sbjct: 235 HHENEIAQSEAA--FGKTFVRYWIHNGFVDINNEKMSKSLGNFTMIKDVL-------KDY 285

Query: 303 PAPVIRLAMLMTHYREPIDF-------TVQRLTEAEILLSKWPQTSTSKGIIDP-----A 350
              V+R+ +L  HYR PID+        +  L      + +      +   ++P     +
Sbjct: 286 HPEVMRMFLLSKHYRSPIDYNDTSMDEVISGLDRLYAFVERAQGAGATVNGVEPGKEWAS 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFNASAHILGI 394
             +A+ +D NT  A+  L    +   +  D                L         ILGI
Sbjct: 346 FEAAMDDDFNTARAMATLFDTVKTGNRILDQQGETVSPETLSAVSTLCADLKRMGSILGI 405

Query: 395 ---------EVCKEH--LNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                       KE     K++   AIE+L+QER+   + K F+ AD IR +L++   +L
Sbjct: 406 LAQEPQDYFRAKKESGLAGKDLDGDAIERLIQERVAARQSKNFARADEIRAELDAMNIVL 465

Query: 443 EDYKNPDNGQRMTRWK 458
           ED   PD     T WK
Sbjct: 466 ED--GPDG----TTWK 475


>gi|209363819|ref|YP_001423944.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|212212147|ref|YP_002303083.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212219210|ref|YP_002305997.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|215919193|ref|NP_820470.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|218511865|sp|Q83BL7|SYC_COXBU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206584077|gb|AAO90984.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|207081752|gb|ABS78112.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|212010557|gb|ACJ17938.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212013472|gb|ACJ20852.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 460

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 179/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L ++   F+ I+   +++YVCG TVYD+ HIG+ R  I+FD++ R LR    E 
Sbjct: 3   VKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RA +   S       + +  +  Q   +D   L  L+P  +PR
Sbjct: 62  -VTFVRNITDIDDKIIKRAGENKESP------AALAERFIQILHEDEKALRVLSPDQEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P++I LIQ ++ + +AY   N ++ FD     +YG  S R +DE + G RV    
Sbjct: 115 ATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSD 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGGLDL FP
Sbjct: 175 SKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +  +    +W+H G L +   KMSKS GN I+I E L+          
Sbjct: 235 HHENEIAQSEAGEE-KPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESD------- 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS--------AL 355
             V+R  +L  HYR P+ ++ + L    + L ++        +++    S        A+
Sbjct: 287 VEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAM 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---------AHILGI-----EVCKEHL 401
            +D NT  A   L ++ RE  +  D   I  A+          +I G+     E   +  
Sbjct: 347 DDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA 406

Query: 402 NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K   +  I+KL+ +R      K + +AD IR QL   G  +ED  +       T W+Q+
Sbjct: 407 KKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDG------TSWRQE 460


>gi|331012668|gb|EGH92724.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 391

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 159/379 (41%), Positives = 222/379 (58%), Gaps = 25/379 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 8   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 67  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 120 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 179

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 180 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 240 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 292 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 351

Query: 356 YNDLNTVSAIQALHKLARE 374
            +D  T  A   L ++ RE
Sbjct: 352 NDDFGTPEACAVLFEMVRE 370


>gi|326626876|gb|EGE33219.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 461

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 266/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSA 354
           A ++R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A
Sbjct: 286 AEIVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
           + +D NT  A   L  +ARE    K  D+      ++H+  I      L +   +     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 408 ---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLAEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 465

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 183/486 (37%), Positives = 263/486 (54%), Gaps = 52/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  E--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIAALHEDADALGIARPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKRS   EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  +   HYR P++++   + +A   L +   T+ +    D A L      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRL-YTALTDVAPDGAALDWNEAH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHLN 402
                +A+ +D NT  A+  L +LA E  +  D      L    A   +LG E  + +L 
Sbjct: 345 AQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGRE-PRAYLQ 403

Query: 403 KNISIAIEKLVQ---------ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +    A+E  ++         ER    + K +++AD IR +L   G  LED   P     
Sbjct: 404 QAAGAAVEGALEPAAIEAKIAERAAAKQAKDYAAADRIRAELLEAGVALED--KPGG--- 458

Query: 454 MTRWKQ 459
           +T W++
Sbjct: 459 LTEWRR 464


>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
          Length = 561

 Score =  306 bits (785), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 150/324 (46%), Positives = 203/324 (62%), Gaps = 16/324 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ ++N+  ++   FQ      + MYVCG T YDF+HIG+AR  + FDVLYR L++   E
Sbjct: 33  QLLLFNSFTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYE 92

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D T L CL PT +P
Sbjct: 93  --VEYVRNFTDIDDKIIKRANER------GETVTSLSSQFINEFLLDMTELQCLPPTCEP 144

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI  +I LI  I+ +G AY    ++ F   S P Y S S RK D+ + G RV    
Sbjct: 145 RVTEHIEHIIKLITQIMENGKAYAIEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDT 204

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIFP
Sbjct: 205 RKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFP 264

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   +     W+HNGF+N + +KM+KS+ NF TI +++         + 
Sbjct: 265 HHENELAQSRAA-YPDSEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDIIAL-------YH 316

Query: 304 APVIRLAMLMTHYREPIDFTVQRL 327
              +R  ++ THYR  ++ + Q L
Sbjct: 317 PMALRFFLMRTHYRSDVNHSDQAL 340


>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 563

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 185/519 (35%), Positives = 265/519 (51%), Gaps = 95/519 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N++ +K   F       + MYVCG T YDF+H+G+AR  + FDVLYR L++   E 
Sbjct: 48  LQLFNSMTKKKELFVPRVEGKVGMYVCGVTPYDFSHVGHARAYVAFDVLYRYLKFLGYE- 106

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TDIDDKII+RA Q        + ++ ++S+   +F+ D   L CL PTH+PR
Sbjct: 107 -VDYVRNFTDIDDKIIKRANQN------GETVTSLSSRFITEFLADVAELQCLPPTHEPR 159

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I LI  II +G AY  + ++ F   + P Y S S R +D  + G+RV     
Sbjct: 160 VTEHIENIIKLITEIIKNGKAYVVDGDVYFSVDNFPEYLSLSGRILDHNRAGSRVAVDTR 219

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NPADF LWK +   EP WESPWG GRPGWHIECSAMS+HYLG VFDIHGGG DLIFPH
Sbjct: 220 KRNPADFALWKAAKEGEPSWESPWGNGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPH 279

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS  A   E     W+HNGF+N++ +KMSKS  NF TI +++         +  
Sbjct: 280 HENELAQSRAA-YPESEVKCWMHNGFINIDDQKMSKSVNNFFTIRDIITL-------YHP 331

Query: 305 PVIRLAMLMTHYR--------------EPIDFTVQRLTEAEILLSKWPQTSTS------- 343
             +R  ++ THY+              + + +  Q L + + ++S   + +TS       
Sbjct: 332 LALRFFLMRTHYKSDANHSDKALEIASDRVYYIFQTLYDCDEVVSLHREENTSAPVPAEE 391

Query: 344 KGIIDP---AVLSALYNDLNTVSAIQALHKLARESTKN---------------------- 378
           + ++D    A L ++ +DL T   +    +L +    N                      
Sbjct: 392 QKLVDDHHKAFLESMSDDLRTTDVLDGFMELLKAINGNLNDLKKLQQKLEQQKKKQQQQK 451

Query: 379 -------------HDLLPIFNASA-------HILGI-------EVCKEHLNKNISIA--- 408
                         D +   NA          ILG+       EV K+   K +  A   
Sbjct: 452 KQQQKQQRPQKQPEDHIQALNALGAEIKHKLSILGLMPPSPLAEVLKQLKEKALKRAGLT 511

Query: 409 ---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + + ++ R+     K+F  +D IRK+L SKG  L D
Sbjct: 512 EESLSEQIEHRIAARNNKQFEVSDQIRKELASKGIALMD 550


>gi|197263729|ref|ZP_03163803.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241984|gb|EDY24604.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 461

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWSSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
           + +D NT  A   L  +ARE    K  D+      ++H+  I      L +   +     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 408 ---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLAEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|295096713|emb|CBK85803.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 465

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 265/483 (54%), Gaps = 50/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  Y  
Sbjct: 6   LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K   YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +P
Sbjct: 66  K---YVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT+HI ++I + Q +I  GHAY A+N +++F   + P YG+ SR+ +D+ + G RV   
Sbjct: 117 RATHHIHEIIDITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVDVV 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+F
Sbjct: 177 DVKRNPMDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + +
Sbjct: 237 PHHENEIAQSTCAHGGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGI-------IDPAVLS 353
            A  +R  ++  HYR  ++++ + L +A   L +       T K +        +   + 
Sbjct: 289 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKSVPAAGGEAFEARFVE 348

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILGIEVCKEHL---- 401
            + +D NT  A   L  +ARE    K+ D+      ++H      +LG+   +  L    
Sbjct: 349 VMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDLFLQS 408

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +      IE L++ RL   + K +++AD  R +L   G ILED      G + T W
Sbjct: 409 GAQADDGEVAEIEALIKARLEARQAKDWAAADAARNRLTEMGIILED------GPQGTTW 462

Query: 458 KQK 460
           ++K
Sbjct: 463 RRK 465


>gi|225387932|ref|ZP_03757696.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
           DSM 15981]
 gi|225045975|gb|EEG56221.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
           DSM 15981]
          Length = 469

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 187/479 (39%), Positives = 257/479 (53%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  + P  ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKIFNTLSRRKEEFVPLTPGVVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E       DA   I+ +  ++  KD   +     T  P 
Sbjct: 60  -VQYVSNFTDVDDKIIKKAIEEGV-----DA-DTISKRYIEECKKDMASMNVKPATVHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +I  +I  GHAY A +  + F T S   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMLDMIGTLIEKGHAYAAADGTVYFRTGSFKEYGKLSHKNLEDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++PADF+LWK     EP WESPW +GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEGKEDPADFVLWKPKKDGEPFWESPWCQGRPGWHIECSVMSKKYLGEQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +  A  W+HN FLN++ RKMSKS GNF T+ E+       G 
Sbjct: 233 IFPHHENEIAQSESAND-KPFATYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTS 343
            +   V+R  ML  HYR P++F+                 +++L + E       +T   
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERIITCMEKLRDLESKARGNAETCDE 344

Query: 344 KGIIDPA------VLSALYNDLNTVSAIQALHKLAR--ESTKNHD--------LLPIFNA 387
           +  +  A        +A+ +D NT  AI A+ +L +   ST + D        L  +   
Sbjct: 345 QNNMAQADGLRGKYEAAMDDDFNTADAISAVFELVKLANSTADADSTARYVSYLKDMIQE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              +LGI    E   + +   +E+L+  R    K K F+ AD IR +L   G +LED +
Sbjct: 405 LCDVLGI--ITERKAETLDSQVEELIAARQQARKEKNFALADEIRGRLLDMGIVLEDTR 461


>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
           tauri]
 gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
           tauri]
          Length = 661

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 158/336 (47%), Positives = 206/336 (61%), Gaps = 25/336 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYY 60
           K+ + NT+ RK   F   DP+   ++MYVCG TVYD++HIG+AR  + FDVLYR L+   
Sbjct: 159 KLWLTNTMTRKKELFIPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRRLMGLG 218

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y    VTY RN TDIDDKII+R+ +        +    +T+K    F +D T L CL PT
Sbjct: 219 YD---VTYCRNFTDIDDKIIKRSNES------GETCEALTNKFIDAFHEDMTALGCLRPT 269

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT  +  +I  I+ +I  G+AYEA+ ++ F   ++P YG+ S RK D+ + G RV 
Sbjct: 270 LEPRATECVDDIIAFIERLIAKGNAYEASGDVYFSVDTLPAYGALSGRKQDDNRAGERVA 329

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNPADF LWK + P EP W SPWG GRPGWHIECSAM    LG   DIHGGG DL
Sbjct: 330 VDERKKNPADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEKMLGPTIDIHGGGQDL 389

Query: 241 IFPHHENEIAQSCCADRIEKTAN------IWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           +FPHHENE+AQS  A      A+       W+HNGF+ ++  KMSKS GNF TI E+L+ 
Sbjct: 390 VFPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLD- 448

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
                  +   V+R  +L  HYR PI++T + L EA
Sbjct: 449 ------KYHPFVLRFMLLGAHYRAPINYTQRALEEA 478


>gi|260596903|ref|YP_003209474.1| cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216080|emb|CBA28825.1| Cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 461

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 266/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  I FDV+ R LR+  G K
Sbjct: 2   LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        D ++++  +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANENG-----EDFVALV-DRMVAEMHNDFDALNILRPESEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A N +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 SKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L+        + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPA-------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +       T + +            + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDRSVAAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILG-IEVCKEHL---- 401
           + +D NT  A   L  +ARE        S+  + L       A +LG +E   E      
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+ +RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQTNDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|30316338|sp|Q8U227|SYC_PYRFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 477

 Score =  306 bits (784), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 188/485 (38%), Positives = 258/485 (53%), Gaps = 66/485 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF+ +    ++MYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 2   LKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEH--KGY 59

Query: 65  CVTYVRNITDIDDKIIERARQ--EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V  V N TDIDDKII+RAR+  E P       I I        F++D   L        
Sbjct: 60  TVLMVMNFTDIDDKIIKRARETGEDPKELAERFIKI--------FLEDMEALKVKPADIY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T+HI  +I  I  +   G+AYE ++ I F+    P YG  S  KI++ + G RV   
Sbjct: 112 PRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPG 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 172 EGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIF 231

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQS  C     +    W+H GF+ ++G KMSKS GNF+TI ELL       + 
Sbjct: 232 PHHENEIAQSEACFGH--EWVKYWLHTGFVMVKGEKMSKSLGNFVTIRELL-------KR 282

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIID 348
           +   VIR  +L  HYR P+++T + L  A+  L +   T             S + G ++
Sbjct: 283 YEPEVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELE 342

Query: 349 -----------PAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHD-----LLPIF 385
                           A+ +D NT  A++A+ ++A        E+ K  +      L  F
Sbjct: 343 FKTYEIIREGKRKFYEAMDDDFNTAEALKAVFEVANAINKYLTEANKPKESILRKALEFF 402

Query: 386 NASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
              + + G  V +++  +           IE LV+ R  L K K++  AD IR++L+  G
Sbjct: 403 KIVSEVFG--VFEDYFREETKEREESEKLIELLVEVRKQLRKEKRYELADMIREELKKLG 460

Query: 440 FILED 444
             LED
Sbjct: 461 IQLED 465


>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|187629791|sp|A7GK01|SYC_BACCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 465

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 259/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++   ++MYVCGPTVY++ HIGNARP +VFD + R L +   + 
Sbjct: 3   IHIYNTLTRQKEEFIPLEEKKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEHKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IAERFIEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ + T     YG  S + I++ + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYYRTKEFEGYGKLSHQAIEDLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KPFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID-------- 348
            +IR  ML  HYR PI+F+ + L      L +   T         +S  + D        
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTTYRNLKHRIESSTDLTDHNEKWLAE 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASAH-------IL 392
                 A  +A+ +D NT +AI  L+ LA  + +     H    +  A  +       IL
Sbjct: 347 MKEFQSAFEAAMDDDFNTANAITELYNLANHANQYLLEEHTSKVVIEAYINQLEMLFRIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+   KE L   +   IE L+Q+R+   K + F+ AD IR  L+ +  ILED        
Sbjct: 407 GLVFTKEEL---LDKEIEALIQKRIEARKNRDFALADKIRDDLKERNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 459

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 173/467 (37%), Positives = 254/467 (54%), Gaps = 46/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL R+   F  ++P+ + MYVCG TVYD +H+G+AR  + FDV+ R LR+   E 
Sbjct: 2   LHIFNTLTREKAPFVPLEPNKVGMYVCGITVYDLSHMGHARTYLSFDVMVRYLRHMGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA      I  N+ +S +T +      +D   L  L P  +PR
Sbjct: 61  -VKYVRNITDVDDKIIQRA------IENNETMSQLTERTVAMMHEDFAALNLLPPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +I+ ++  GHAY A++ +++FD S+  +YG+ S++ +D+ + G RV    
Sbjct: 114 VTTHMAEIIEVIEKLVAKGHAYVASSGDVLFDVSTFKDYGALSKQDLDQLQSGARVAVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W SPWG GRPGWHIECSAM+  +LGK FDIHGGG DL FP
Sbjct: 174 GKDDPMDFVLWKKAKANEPSWSSPWGEGRPGWHIECSAMNHKHLGKHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H G + ++  KMSKS GNF T+  +LE          
Sbjct: 234 HHENEVAQSCCAFDT-PYVNTWVHTGMVQVDNEKMSKSLGNFFTLRSVLEQHH------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIID--PAVLS 353
              +R  ++  HYR  + ++   L +A+  L +         P + T  G         +
Sbjct: 286 KETLRFFLMSAHYRSQLSYSQDNLEQAQSGLERLYTALRDVTPDSRTELGYGGYLARFEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP--------IFNASAHILGIEVCKEH----- 400
           A+ +D NT  A   L   A++  K     P        +  +   ILG   C +      
Sbjct: 346 AMNDDFNTPIAFSVLFDCAKDLNKAKSTDPAEASRLAQVLISLGAILG---CLQDDPVNF 402

Query: 401 LNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L  +  I   A+  L+ +R      K + +AD  R  L + G ++ED
Sbjct: 403 LQSDADIDGEAVAALIAQRNQARADKDWGAADAARDALTAMGVVIED 449


>gi|282899565|ref|ZP_06307529.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195444|gb|EFA70377.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 488

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 188/505 (37%), Positives = 269/505 (53%), Gaps = 71/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+  EF+ ++P  +RMY CG TVYD+ H+G+AR  IV+DV+ R L +  G +
Sbjct: 3   LSIYNTLTRRQEEFKPVEPGQVRMYYCGVTVYDYCHLGHARACIVWDVVRRYLEFI-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RAR+E      N  +  +  +  Q + +D  RL        PR
Sbjct: 62  -VRYIQNFTDIDDKILNRARKE------NSTMETVAERYIQAYFEDMGRLGVREADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  LIQ++ + G+AY A+ ++ +       YG  S RK+ + + G   RV   
Sbjct: 115 ATHTMNGIKRLIQDLEVRGYAYPADGDVYYAVRKFNEYGKLSGRKLADLQAGASERVNIE 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KK+P DF LWK + P EP WESPWG+GRPGWHIECSAM    LG   DIH GG 
Sbjct: 175 DPEYQKKKDPFDFALWKAAKPCEPAWESPWGKGRPGWHIECSAMVRDRLGDTIDIHAGGA 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      +  AN W+HNG + ++G KMSKS GNF TI +LL+     
Sbjct: 235 DLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWP---------QTS 341
            R      +RL +LM  YR+P+DFT + +  A        E LL  +          Q++
Sbjct: 289 -RGVDPMALRLFVLMAQYRKPLDFTEEAILAATNGWHTLKEGLLFGYHHGAKLDWDLQSA 347

Query: 342 TSKGIIDPAVL----SALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
                ID   +    +A+ +D N    +  + ++A+E  K  +++               
Sbjct: 348 KDNTNIDQVEIEKFTTAVDDDFNFPGGLAVIFEIAKELRKEGNIIVHEGKTQTPCAKLLT 407

Query: 383 --PIFNASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQL 435
                     +LG+ + K    K I  +     IE LVQ+R    K K F+ +D IR++L
Sbjct: 408 KWQTLVTLTSVLGL-IAKPEEQKTIDESLSDKVIENLVQKRQEARKAKDFAESDRIREEL 466

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
           ++KG  L D K        TRW+++
Sbjct: 467 KAKGITLIDSKEG------TRWQRE 485


>gi|262281989|ref|ZP_06059758.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262443|gb|EEY81140.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 450

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 174/472 (36%), Positives = 254/472 (53%), Gaps = 39/472 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVTALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
             PR    +  +I  +++++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 RHPRVVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID----- 348
                   V+R      HYR+PI+FT + + +A    + L + + Q  T +   D     
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQAF 344

Query: 349 -PAVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAKLLEVFGIVFVEEVLDAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               IE+L++ER +    + F++AD IR  L ++G  L D K   +G R TR
Sbjct: 405 ----IERLIEERQVARANRDFATADRIRDDLAAQGIKLLDTK---DGVRWTR 449


>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 458

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 183/463 (39%), Positives = 257/463 (55%), Gaps = 39/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +   ++  +D    +T +      +D   L  + P  +PR
Sbjct: 61  -LNYVRNVTDVDDKIIKRAAE--TNVTCDD----LTERLIGDMHQDFDALGMVRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++++I   HAY A+N +++F   S  +YG  S + +++ + G RV    
Sbjct: 114 ATQHISEIIELVESLIAQDHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVGVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGGDYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA-VLSAL 355
           A  +R  ++  HYR  ++++   L +A   L +        P  + + G    A  + A+
Sbjct: 286 AESVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDEQVARFVDAM 345

Query: 356 YNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILGI------EVCKEHL 401
            +D NT  A  AL  L RE    K  D+       A       +LGI         K   
Sbjct: 346 DDDFNTPEAYSALFDLVREINRQKAEDMSVAAGLGARLRELGAVLGILQQDPDAFLKGDE 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  IE+L+ ER      K +++AD  R +L   G +LED
Sbjct: 406 ADEEVAEIERLIAERNQARADKNWAAADAARARLTEMGIVLED 448


>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 459

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 177/465 (38%), Positives = 258/465 (55%), Gaps = 42/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           ++IYNTL R+  +F+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+  Y  
Sbjct: 2   VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYNL 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K   YVRNITD+DDKII+RA +   SI  ND    +T + T+   +D   L  L P  +P
Sbjct: 62  K---YVRNITDVDDKIIKRANENKESI--ND----LTLRMTKAMHEDFDSLNMLRPDVEP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
             T H+ ++I +++ +I  GHAY  A+ +++FD S+   YG+ S++ +   + G+RV   
Sbjct: 113 TVTGHMDEIIEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF+LWK++   EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL F
Sbjct: 173 QDKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA+  E   N WIH G + +   KMSKS  NF T+ ++L       + +
Sbjct: 233 PHHENEIAQSCCANNGE-YVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVL-------KEY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS--------- 353
               +R  ++  HYR  ++++ + L +A   L +          I+  + S         
Sbjct: 285 DPESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVKPIECELESNEFVIKFRK 344

Query: 354 ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKE 399
           A+ +D NT  A+  L +LA+E        + +   L  I      +LG+         + 
Sbjct: 345 AMDDDFNTPEALPVLFELAKELNRVKESDAIQAGQLAFILRTIGEVLGVAQQAPEAFLQG 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + N    IE L+ +R      K +++AD  R  L + G ILED
Sbjct: 405 GQDDNEVATIEALIVKRNDARASKNWAAADEARDALNALGVILED 449


>gi|82543006|ref|YP_406953.1| cysteinyl-tRNA synthetase [Shigella boydii Sb227]
 gi|109894937|sp|Q324Y3|SYC_SHIBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81244417|gb|ABB65125.1| cysteine tRNA synthetase [Shigella boydii Sb227]
          Length = 439

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 176/450 (39%), Positives = 252/450 (56%), Gaps = 42/450 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +    L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSA 428
           + A       IE L+Q+RL   K K ++  
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAGG 435


>gi|329999154|ref|ZP_08303351.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328538407|gb|EGF64532.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 444

 Score =  306 bits (784), Expect = 5e-81,   Method: Compositional matrix adjust.
 Identities = 163/383 (42%), Positives = 227/383 (59%), Gaps = 26/383 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  IR  ++  HYR  ++++ + L +A   L + +     +   +D A         + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK 377
           + +D NT  A   L  +ARE  +
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNR 368


>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 481

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 179/500 (35%), Positives = 253/500 (50%), Gaps = 65/500 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN + R+  EF  + P  + +YVCG T Y+  HIGNARP +V+D + R L +   + 
Sbjct: 3   IRVYNDMTRQKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDTIRRFLDHEGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII  A +E  +        +I ++  + + +   +L        PR
Sbjct: 62  -VTYVQNFTDVDDKIIRAANEEGVTW------DVIANRYIKAYFEVMDKLHVKRAHIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HIP +I+ +Q +I +G+ Y  + ++ +      +YG  S RK+D+   G RV     
Sbjct: 115 VSEHIPDIIHTVQELINNGYGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP W+SPWG+GRPGWHIECS MS+ YLG   D HGGG DLIFPH
Sbjct: 175 KENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A  +      W+HNGF+ +   KMSKS GNF T+ +LL       + +  
Sbjct: 235 HENEIAQSEGATGVHPFVRYWVHNGFITINEEKMSKSLGNFKTVYDLL-------KEYEP 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
             IR  +L THYR P+DF+ +RL EA   L +      +   I   +             
Sbjct: 288 ETIRYFILNTHYRSPLDFSQERLAEAGRSLERLRTAQNNLQEIQQVITVGPDAESLALRD 347

Query: 352 ---------LSALYNDLNTVSAIQALHKLARESTKNHDLL-------------PIFNASA 389
                      A+ +D NT  AI  L  LA+E    H+ +              I  A  
Sbjct: 348 KVEELRKGFFDAMSDDFNTSLAISYLFALAKEINVYHNAIISGAKKPDGKLVEQIDKAWK 407

Query: 390 HILGIEVCKEH---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            ++G+    E+            N    I   ++ER    K + F+ AD IR +L +KG 
Sbjct: 408 EMIGVIGILENQPAANGEGGAVSNEEAEIAARIEERQAARKARDFAKADAIRDELAAKGI 467

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
           ILED   P       RWK+K
Sbjct: 468 ILED--TPQG----VRWKRK 481


>gi|270291200|ref|ZP_06197423.1| cysteinyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280596|gb|EFA26431.1| cysteinyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 472

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 182/492 (36%), Positives = 259/492 (52%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT+ R    F+ +    + MYVCGPTVY++ HIGNAR +I FD + R L Y   + 
Sbjct: 2   IKLYNTMTRSKEVFKPLVDQQVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A+ E+ ++P       +  +    F +D   L     T  PR
Sbjct: 61  -VRFVSNFTDVDDKMIKAAQAENITVPE------LAERYIAAFKEDVQALNVEPATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I  +I  + ++I   +AY     + +      NYG+ S + IDE + G        
Sbjct: 114 ATENIADIIAFVADLIEKDYAYVVEGNVYYRARRFKNYGALSHQNIDELEQGASQHINDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  WE+PWG+GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETMQKEDPIDFALWKAAKPGEIAWEAPWGKGRPGWHIECSVMSTKYLGDTFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS     ++  A  W+HNGF+ +  +  KMSKS GNF+T+++L+      
Sbjct: 234 QFPHHENEIAQSEARTGVQ-FARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLI------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA 350
            +     V+R  M  T YR+PI +T   L +A+  L K             T+ G  DPA
Sbjct: 287 -KQVNPQVLRFLMSTTQYRKPIQYTETSLQDAKNNLEKLQNAYVNLNYRLQTADGAADPA 345

Query: 351 V-----------LSALYNDLNTVSAIQALHKLAR-------ESTKNHD----LLPIFNAS 388
           V           ++A+ +D N  + I  +++ AR       ++T NH+    L   F   
Sbjct: 346 VDQQAAALQADFVAAMDDDFNAQNGITVVYEFARLINVYSEQATVNHEQIARLAKQFAEM 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A I GIE+            IE LV++R      + F ++D +R QL+  G ILED   P
Sbjct: 406 AAIFGIELATA-TEAPADEKIEALVKQRDAARAARDFETSDRLRDQLKEMGIILED--TP 462

Query: 449 DNGQRMTRWKQK 460
                 TRW++K
Sbjct: 463 QG----TRWRKK 470


>gi|83719803|ref|YP_442471.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167581386|ref|ZP_02374260.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167621097|ref|ZP_02389728.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257138679|ref|ZP_05586941.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|109894888|sp|Q2SX78|SYC_BURTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83653628|gb|ABC37691.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 465

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 184/472 (38%), Positives = 255/472 (54%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R   +F    P  +RMYVCG TVYD+ HIG+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRA--A 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA +        + I  +T +       D   L    P  +
Sbjct: 60  GYRVTYVRNITDIDDKIIRRALEN------GETIQSLTRRFIDAMNADFDALGVERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           K  K +P DF+LWKR+ P EP    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 KDAKDDPLDFVLWKRAKPEEPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++   T+      D A L      
Sbjct: 288 --KYDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRL-YTALKDVTPDAAPLDWSEAH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHDLLPIF------NASAHILGIEVCKEHL 401
                +A+ +D NT  A+  L +LA E  +  +  P         A    L     +E L
Sbjct: 345 AQRFAAAMNDDFNTAVAVAVLFELATEVNRTRE--PALARQLKRLAGLLGLLGREPREFL 402

Query: 402 NKNISIA---------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +    A         IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQAAGAARTGALEPDEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALED 454


>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 476

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 179/479 (37%), Positives = 254/479 (53%), Gaps = 54/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ ++  EF   +   + MY CGPT Y++ H+GNAR ++VFD++ R L Y   E 
Sbjct: 3   VKIYNTIHKEKEEFIPREAGKVAMYACGPTTYNYFHLGNARMLVVFDMVRRYLAYKGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII+RA +E+   P+      +  +  +++ KD   L     T  P+
Sbjct: 62  -VTYVQNFTDVDDKIIKRASEENCE-PL-----ALAGRYIEEYYKDANALNIQPATVHPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI +MI +I+ +   G AY    ++ F     P YG  S R +++ + G RV     
Sbjct: 115 ATDHIKEMIEIIKGLEKKGLAYPVEGDVYFAVEHFPQYGRLSGRNLEDLQAGARVEIDDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK++ P EP W SPWG GRPGWHIECSAM+  YLG  FDIHGGG DL+FPH
Sbjct: 175 KLNPMDFALWKKAKPGEPAWPSPWGDGRPGWHIECSAMALKYLGPNFDIHGGGGDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E+ A  W+HN F+ +   KMSKS GNF  I ++L  KKF     P 
Sbjct: 235 HENEIAQSEGYLDGEQFARYWMHNAFITVNQEKMSKSLGNFFMIRDIL--KKF-----PG 287

Query: 305 PVIRLAMLMTHYREPIDF----------------TVQRLTEAEILLSKWPQTSTSKGII- 347
            V+R  +L THYR P+DF                T  RL    +   K   ++ ++G + 
Sbjct: 288 EVVRFYLLGTHYRSPLDFDDEKLEMAARGLDRLKTSVRLAGEALSKGKSTDSAGTRGELL 347

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASAH 390
                   A   A+ +D N+  A  +L  LA+E             +  +        A 
Sbjct: 348 NASSKARAAFEEAMEDDFNSAQAYASLFDLAKEINTALNEGGWTGAQIAEARDTLIDLAG 407

Query: 391 ILGIEVCKEHL-----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ILG ++ K+       +   +  +E +++ R      K +S+AD IR +L+    ILED
Sbjct: 408 ILGFDLQKDSEVPAGESGKFNAVMELVLELRAKARADKDWSTADLIRDRLKEASIILED 466


>gi|241667314|ref|ZP_04754892.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 459

 Score =  306 bits (783), Expect = 6e-81,   Method: Compositional matrix adjust.
 Identities = 184/472 (38%), Positives = 253/472 (53%), Gaps = 59/472 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  K  EF+ I+P+ I+MYVCG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT--------TRLACLA 118
           T+VRNITDIDDKII+RA +                + T Q V+ T         +L  L 
Sbjct: 61  TFVRNITDIDDKIIKRANE--------------NGETTDQLVERTIKSMHDAFDKLNILR 106

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           PT +PRAT  IP+MI +I+ ++  G AY+  N ++ +  +   +YG  S++ ++  + G+
Sbjct: 107 PTKEPRATQTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGS 166

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           RV     K+NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG
Sbjct: 167 RVDVVEEKENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGG 226

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENEIAQS   +     AN W+H+G + +   KMSKS  NF TINE++E    
Sbjct: 227 SDLRFPHHENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE---- 281

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPA-- 350
               +   VIR  +  T YR  I+++ + L  A   + +              + D A  
Sbjct: 282 ---EYHPEVIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDANE 338

Query: 351 ----VLSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI---- 394
                + A+ ND NT  A+  L  LA+E          K      +      +LGI    
Sbjct: 339 YEEKFIKAMDNDFNTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTD 398

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E  K+    ++S  IEKL+ ER    K K ++ AD IR +L+++G ILED
Sbjct: 399 IEEYFKQGDGIDVS-EIEKLIAERAQAKKDKNYARADEIRNELQNQGIILED 449


>gi|167044639|gb|ABZ09311.1| putative tRNA synthetases class I (C) catalytic domain protein
           [uncultured marine crenarchaeote HF4000_APKG7F19]
          Length = 463

 Score =  306 bits (783), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 191/471 (40%), Positives = 257/471 (54%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++TL    TE +  D   +R+Y+CG TVYD AHIG+AR +IVFDVL R L     + 
Sbjct: 2   MQIFDTLGNTKTELKFSDK--VRIYLCGVTVYDDAHIGHARTIIVFDVLRRFLES--QKI 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKIIERA QE  S P+      + +K T+ +  D  RL     T  P+
Sbjct: 58  LVEFVQNFTDVDDKIIERALQEKTS-PLE-----LAAKYTKNYFDDFDRLNVKRATMYPK 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  M  LI N++   +AY   N + F  S    YG  S++K D+   G RV     
Sbjct: 112 ATEHIEDMQNLISNLVDKKYAYITKNGVYFSVSKFTEYGKLSKKKTDDLISGARVAVDEE 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK S   EP W+SPWG+GRPGWHIECSAMS  YLG+ F+IHGGG DLIFPH
Sbjct: 172 KNNPIDFALWKFSNS-EPSWDSPWGKGRPGWHIECSAMSLKYLGENFEIHGGGRDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      + T  IW+H G + + G KMSKS GN  ++N +LE       +W  
Sbjct: 231 HENEIAQSESFMSNQFT-KIWMHVGMITINGEKMSKSLGNVKSVNHVLE-------NWGP 282

Query: 305 PVIRLAMLMTHYREPID----FTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            +IRL  L   Y +PID    F  + +T+   + S + +   ++G  +  +         
Sbjct: 283 NIIRLFCLSGSYSKPIDYSEKFLKENITKLRQIESCYYELRLAEGTDEETIAEKLVKECR 342

Query: 353 ----SALYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASAHILGIEVC 397
               SAL NDLNT  A+ A +KL RE            T    +LP F   + ILGI++ 
Sbjct: 343 DEFDSALNNDLNTPLALTAFYKLIREVNSLAAEEKITQTSAEIVLPEFERMSGILGIQIL 402

Query: 398 K-EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           K     KN    I +++++R      K +  AD IR ++  K  I  D+KN
Sbjct: 403 KVSDAEKN---EINQMIKKRDEYRMQKNYEQADSIRAKIAEKNIIFFDHKN 450


>gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 480

 Score =  306 bits (783), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 187/494 (37%), Positives = 259/494 (52%), Gaps = 58/494 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++Y+TL      F+ I    I +YVCG TVYD+ H+G+AR M+ FDV+ R LR   
Sbjct: 8   QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII+RA          + I+ +T +      +D   L C +P  
Sbjct: 68  YQ--VNYVRNITDIDDKIIQRAYDN------GETITELTDRFITAMHQDEQFLGCQSPNI 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           +PRAT HI  M +LI  ++    AY+ +  ++ +     PNYG  S+R +D+ + G   R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG+ FDIHGGG 
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI E+++     
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVMD----- 293

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIID------- 348
              +    IR  +L +HYR P++F+   L E+   LS+  Q+  S    G+I        
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351

Query: 349 ----PAVLSALYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFNASAHILGIE 395
                A   A+ +D NT  A+  L  +         A E  K           A +L I 
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411

Query: 396 VCKEH--LNKNIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               H  L  NI           I   + +R      K F+ AD IR +L  +G  LED 
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELED- 470

Query: 446 KNPDNGQRMTRWKQ 459
                G+  T W++
Sbjct: 471 -----GRMGTTWRR 479


>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 474

 Score =  306 bits (783), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 186/480 (38%), Positives = 250/480 (52%), Gaps = 58/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 1   MKVYNTLTKQKEEFKPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEH--KGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA QE    P       +  K  + F++D   L        PR
Sbjct: 59  TVLMVMNFTDIDDKIIRRA-QETGEDPKE-----LAEKFLKYFLEDMKALKVKPADIYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I  ++ +   G+AYE ++ + F+     +YG  S  K++E + G RV     
Sbjct: 113 VTEHIEDIIDFVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK++ P EP W+SPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPH
Sbjct: 173 KRNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSTMSTKYLGEQFDIHGGGNDLIFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQ+  C  +  +    W+H GF+ ++G KMSKS GNF+TI ELL+        + 
Sbjct: 233 HENEIAQTEACTGK--EWVRYWLHTGFVMVKGEKMSKSLGNFVTIRELLQ-------RYS 283

Query: 304 APVIRLAMLMTHYREPIDFTVQ---------------------RLTEAEILLSKWPQTST 342
             VIR  +L  HYR P+D+T +                      L +AEI   KW +   
Sbjct: 284 PEVIRFFVLQKHYRSPLDYTEEGIQHAKNNLEKLYNTIENIRIALEKAEIPF-KWSKEEF 342

Query: 343 S-KGIIDPA---VLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
               +I  A      A+ +D NT  A++ + ++A    K                L  F 
Sbjct: 343 ELYEVIREAKRKFYEAMDDDFNTAEAMKPIFEVANAVNKYLAKVEKPKESVLRKALEFFK 402

Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + GI  E  KE         IE L+Q R  L K K ++ AD IR +L   G  LED
Sbjct: 403 MVGEVFGIFEEYFKETKETKEEELIELLIQVRAELRKQKNYALADKIRAELRELGIQLED 462


>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 500

 Score =  306 bits (783), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 185/521 (35%), Positives = 265/521 (50%), Gaps = 91/521 (17%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R+  EF    P  + MYVCGPT Y+F H+GNARP++ FD + R L  Y G + V
Sbjct: 3   LYNTLSRQKEEFVPAIPGRVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYL-IYKGYQ-V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N TDIDDKII+RA +E          S +  K T+++  D T L  +     P+ +
Sbjct: 61  LYVQNFTDIDDKIIKRAAEEKLDP------SALAFKYTEEYYIDATSLNVMMADIHPKVS 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           +H+ ++I L++ ++  G AY+++ ++ F+     +YG  S R +++   G RV     K+
Sbjct: 115 DHMAEIIELVEKLVQKGFAYQSDGDVYFEVRRFKDYGKLSGRALEDMLAGARVEVNEKKR 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF LWK + P EP W SPWG+GRPGWHIECSAMS  YLG+ FD+HGGG DLIFPHHE
Sbjct: 175 DPMDFALWKAAKPGEPSWNSPWGQGRPGWHIECSAMSLKYLGENFDMHGGGADLIFPHHE 234

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS  A   E  A  W+HNGF+ +   KMSKS GNF  + E+L+        +   V
Sbjct: 235 NEIAQSEAATG-EPLARYWLHNGFITVNQEKMSKSLGNFFLVREILD-------KFSPEV 286

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------------PQT 340
           +R  +L THYR P+DF  ++L   E  L +                           P  
Sbjct: 287 VRFFLLGTHYRSPLDFDDEKLAVVEKGLDRIRTSIQLLGEACQRAGVDFSMINAKEKPAR 346

Query: 341 STSKGIID-------------PAVLSALYNDLNTVSAIQALHKLAREST----------- 376
            TS  IID              +   A+ +D NT  A+ +L +LA+E+            
Sbjct: 347 VTS--IIDTRHSSMKAFIKIKTSFEQAMEDDFNTALAVGSLFELAKETNILVQSLGPKIS 404

Query: 377 --------KNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLIL 419
                   +  +L  +FN    I   ++C          E  +  +   ++ L+  R   
Sbjct: 405 EQEKACLLQAAELFKLFNQVLGIFKEDLCTGYPLVTPVDESGDGMLEAVMQMLLDIRNEA 464

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K K ++ +D IR  L+    ILED   P      TRWK++
Sbjct: 465 RKNKNWALSDRIRDALKDINVILED--TPQG----TRWKKQ 499


>gi|153209422|ref|ZP_01947398.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165919402|ref|ZP_02219468.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|187629807|sp|A9KBJ2|SYC_COXBN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120575359|gb|EAX31983.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916918|gb|EDR35522.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 458

 Score =  306 bits (783), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 179/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L ++   F+ I+   +++YVCG TVYD+ HIG+ R  I+FD++ R LR    E 
Sbjct: 1   MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RA +   S       + +  +  Q   +D   L  L+P  +PR
Sbjct: 60  -VTFVRNITDIDDKIIKRAGENKESP------AALAERFIQILHEDEKALRVLSPDQEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P++I LIQ ++ + +AY   N ++ FD     +YG  S R +DE + G RV    
Sbjct: 113 ATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGGLDL FP
Sbjct: 173 SKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +  +    +W+H G L +   KMSKS GN I+I E L+          
Sbjct: 233 HHENEIAQSEAGEE-KPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESD------- 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS--------AL 355
             V+R  +L  HYR P+ ++ + L    + L ++        +++    S        A+
Sbjct: 285 VEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAM 344

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---------AHILGI-----EVCKEHL 401
            +D NT  A   L ++ RE  +  D   I  A+          +I G+     E   +  
Sbjct: 345 DDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA 404

Query: 402 NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K   +  I+KL+ +R      K + +AD IR QL   G  +ED  +       T W+Q+
Sbjct: 405 KKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDG------TSWRQE 458


>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6831682|sp|O58370|SYC_PYRHO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 476

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 190/479 (39%), Positives = 258/479 (53%), Gaps = 56/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL ++  EF+ I+   +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 3   LRIYNTLTKQKEEFKPINEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEH--KGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA++        +  + +  K  + F++D   L        PR
Sbjct: 61  SVLMVMNFTDIDDKIIRRAKE------TGEDPAKLAEKFIKVFLEDMKALKVKPADIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I  I+ +   G+AYE ++ + F+      YG  S  K++E + G RV     
Sbjct: 115 VTEHIEDIIQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKLEELRKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS  C     +  + W+H GF+ ++G KMSKS GNF+T+ ELL+        + 
Sbjct: 235 HENEIAQSEACFGH--EWVHYWLHTGFVMVKGEKMSKSLGNFVTVRELLQ-------RYS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-IDPAVLS--------- 353
             VIR  +L  HYR P+D++ + L  A+  L +   T  +  I ++ A L+         
Sbjct: 286 PEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMENAELAYTWDENDFK 345

Query: 354 --------------ALYNDLNTVSAIQ-------ALHKLARESTKNHDLL-----PIFNA 387
                         A+ +D NT  A++       A++K   E+ K  + +       F  
Sbjct: 346 AYNSIKEARRKFYEAMDDDFNTAEALKAVFEVSNAINKYITEAEKPKESVLRKAWEFFRT 405

Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I GI  E  KE   K     IE L+Q R  L K +KF  AD IR++L   G  LED
Sbjct: 406 VGEIFGIFEEYFKEEKAKEEEKLIELLIQVRAELRKERKFELADKIREELRKLGIQLED 464


>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 461

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 181/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        + I  +T++   +   D   L  L+P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIRRATEN------GETIEQLTNRMIDEMHTDFRALNILSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I ++I L++ +I   HAY A+N +++F   + P YG  SR+ +++ K G RV    
Sbjct: 114 ATHYIAEIIELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +   N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGDYV-NYWMHSGMVMVDREKMSKSLNNFFTVRDVLS-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSA 354
           A  IR  ++  HYR  +++T + L +A   L +            PA            A
Sbjct: 286 AETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDASVPAAGGEAFEHRFRDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILGIEVCKEH--------- 400
           + +D NT  A   L  +ARE  +           + +A   + G+    EH         
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKADDAAAASGLASALRQLAGVLGLLEHDPELFLQSG 405

Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R    + K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|257438112|ref|ZP_05613867.1| cysteine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257199443|gb|EEU97727.1| cysteine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 465

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 188/473 (39%), Positives = 266/473 (56%), Gaps = 51/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y  G K
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYR-GNK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E  S+        +  +   +++KD   L C  PT QPR
Sbjct: 60  -VIYVSNITDIDDKLIKKGQEEGTSM------KEVAQRFEAEYLKDAAGLNCKKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
           AT HI Q++ +++++I  GHAY A N ++ F   S P YG  S  K+D+ + G R     
Sbjct: 113 ATEHIQQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A+ W+HNGF+N++ +KMSKS  NF T+ ++ +   +  
Sbjct: 233 LIFPHHENEIAQSECANGCE-FAHYWMHNGFINVDNQKMSKSLHNFFTVRDVADLYGY-- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSKWP----QTS 341
                  IR  ML   YR P+++TV  +                 +  LSK      +T 
Sbjct: 290 -----EPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTAFGTDETL 344

Query: 342 TSKGIIDPA-VLSALYNDLNTVSAIQALHKLARE---------STKNHDLLPIFNASAHI 391
           T+K     A    A+ +DLNT  A+ A+  L +E                   F+    +
Sbjct: 345 TAKADEARAKFCKAMDDDLNTPDALAAVFDLVKEINTLSAASSKAALEAAAKAFDEITGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D
Sbjct: 405 LGLMYNRK--KDEVPAEVTELVEKRAAAKKAKDWAAADAIRAQLTEMGWAVKD 455


>gi|295694815|ref|YP_003588053.1| cysteinyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410417|gb|ADG04909.1| cysteinyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 476

 Score =  305 bits (782), Expect = 7e-81,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 256/478 (53%), Gaps = 54/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL ++   F+  +P  ++MY CGPTVYD+ HIGNAR  +VFD++ R LRY     
Sbjct: 3   IRVFNTLTKRKEVFEPQEPGVVKMYCCGPTVYDYFHIGNARAFVVFDLVRRYLRYR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII RA +EH       A+  +  K  + + +D   L       QPR
Sbjct: 61  RVTYVQNFTDVDDKIIRRAAEEHM------AVQDLAEKYIRAYFEDAAALGIEPADVQPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+ ++I +IQ ++  G AY    ++ FDTS  P+YG  S +       G RV     
Sbjct: 115 VTMHMHEIIDMIQALLDKGFAYRIQEDVYFDTSRDPDYGKLSGQDPAALMAGARVEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P E  W+SPWG+GRPGWHIECSAMS  YLG   DIH GG DLIFPH
Sbjct: 175 KRHPLDFALWKGSKPGEVAWDSPWGKGRPGWHIECSAMSRTYLGDTLDIHAGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C       A  W+HNG+L     KMSKS GN +T+ ELL+  +        
Sbjct: 235 HENEIAQSECVTG-HPFARYWMHNGYLQWNRVKMSKSLGNVVTVRELLKRVR-------P 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------W--PQTSTSKGIID---- 348
             IRL +L  HYR P++F+++ L +A+  L +          W  P +S +  + +    
Sbjct: 287 HAIRLYLLSAHYRHPLNFSLELLEQADRGLERIESSLRDLGDWLGPDSSLTGAVTEESGH 346

Query: 349 -PAV------------LSALYNDLNTVSAIQALHK---LARESTKNHDLLPI------FN 386
            P +              A+ +D NT  A+ AL++   LA  + +  D+          +
Sbjct: 347 VPGLEVDEVQRIHEKWTEAMDDDFNTAEALGALYEGVGLANRAIREQDVTRAKAWQGWLS 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             A  +G+    +  ++     IE L+  R    K + +++AD IR QL   G +LED
Sbjct: 407 YHARFMGLIADGQKESETEREKIEALIARRAEARKKRDWAAADRIRDQLSEMGIVLED 464


>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|187629810|sp|A4J0Y9|SYC_DESRM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 486

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 189/507 (37%), Positives = 255/507 (50%), Gaps = 73/507 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R   EF   D  ++ MYVCGPT Y+F H+GNARP++ FD + R    Y G K
Sbjct: 1   MQIYNTLARAKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYF-LYKGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKII RA +E    P+      +  K  Q+F  D   L  +     P+
Sbjct: 60  -VDYVQNFTDVDDKIINRAAEEKID-PLE-----LAQKYIQEFFVDADALNVMRADTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HI ++I LI+ +   GHAY  + ++ F   S   YG  S R +++ + G RV     
Sbjct: 113 VSEHIEEIIDLIKRLEDQGHAYVVDGDVYFAVRSFAEYGKLSGRSLEDMQAGARVEVDPR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK + P EP W+SPWG GRPGWHIECSAM+  YLG  FDIHGGG DLIFPH
Sbjct: 173 KKDPMDFALWKAAKPGEPSWDSPWGSGRPGWHIECSAMAEKYLGNGFDIHGGGFDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A +    A  W+HNGF+ +   KMSKS GNF  + E+L         +P 
Sbjct: 233 HENEIAQSEAACKA-PFARYWMHNGFITINQEKMSKSLGNFFLVREILA-------KFPP 284

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKG--------- 345
            V+R  +L THYR P+DF           ++R+  A  LL +       +G         
Sbjct: 285 DVVRWYLLSTHYRSPLDFDDEKLVMSGKGLERIKTALRLLYEAMDLPVYEGEDIQGAENF 344

Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLAREST-------------------KNHDL 381
                 I      A+ +D NT  AI     LA+E                     + H L
Sbjct: 345 EETLQRIRLEFEKAMDDDFNTALAISYFFDLAKEVNIYVGKLNSKVTLEMRKILDQAHTL 404

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL--------KMKKFSSADYIRK 433
           +  FN    IL  +     L   ++ A + L +  + L+          K +S+AD IR 
Sbjct: 405 IKDFNRVLGILKEDKMTGKLLIEMAGADDTLTEGLVQLIIKIRQEARSKKDWSTADAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
            L+  G +LED   P       RWK++
Sbjct: 465 GLKELGVVLED--TPQG----VRWKKQ 485


>gi|309790456|ref|ZP_07685017.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227504|gb|EFO81171.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 477

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 186/488 (38%), Positives = 262/488 (53%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYN+L RK+   + ++P  +RMYVCG TVYD AHIG+A   +VFD++ R L +   E 
Sbjct: 11  IQIYNSLTRKVEPLETVEPQVVRMYVCGVTVYDDAHIGHAMSAVVFDIIRRYLEFRGYE- 69

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII RA     +    D +++  ++   +F+    RL  L  T  PR
Sbjct: 70  -VRHIVNFTDVDDKIIARA-----ATLGRDPLTM-AAQYADEFLAQLERLNVLPATAYPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+ + ++I   + +I  GHAY A  ++ F  +S  +YG  S R ++E   GTR      
Sbjct: 123 ATHTMAEIIDFTERLIAAGHAYPAEGDVYFRVASDADYGKLSGRSLEEMLTGTRFEVDPR 182

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF LWK + P EP W SPWG GRPGWHIECSAMS  +LG+  DIHGGG DL+FPH
Sbjct: 183 KESPADFALWKGAKPGEPAWPSPWGNGRPGWHIECSAMSMKHLGEEIDIHGGGNDLVFPH 242

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL------EGRKMSKSNGNFITINELLETKKFG 298
           HENEIAQS C    +  A  W+HNG L L      +  KMSKS GN +TI+  L      
Sbjct: 243 HENEIAQSECLTG-KSFARYWVHNGMLQLVNPETRQVEKMSKSLGNVVTIDSFLS----- 296

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQ-------RLTEAEILLSKWPQTSTSKGIID--- 348
              + A V RL +L ++YR P+ +  +       +L      L     ++ S   ++   
Sbjct: 297 --QYDADVFRLIVLSSYYRSPLTYNTEIAADNARKLDRLLGALLPALGSNASGPAVESLN 354

Query: 349 -------PAVLSALYNDLNTVSAIQALHKL------ARESTKNHDLLPIFNAS----AHI 391
                   A LSA+  D NT  A+ AL +L      AR++    D       S    A +
Sbjct: 355 QSVERTRSAFLSAMDADFNTAGALAALFELVRAINVARDAGVGGDAFSAAQNSLRELASV 414

Query: 392 LGIEVCKEHL-NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           LG+ +  +H   + ++  IE L++ R  L K K+F  AD IR +L   G  LED      
Sbjct: 415 LGLRLNPQHAKQQEVAPFIELLIELRTSLRKAKQFELADTIRTRLADLGVTLED------ 468

Query: 451 GQRMTRWK 458
           G + TR+K
Sbjct: 469 GPQGTRYK 476


>gi|82775639|ref|YP_401986.1| cysteinyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|109894938|sp|Q32JL0|SYC_SHIDS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81239787|gb|ABB60497.1| cysteine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 461

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 268/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFNALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY  +N +++FD  + P YG  SR+ +D+   G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVVDNGDVMFDVPTDPTYGVLSRQDLDQLLAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+N  DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNTMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCA-HDGQYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082064|sp|B0U0I3|SYC_FRAP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 459

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 251/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  K  EF+ I+P+ I+MYVCG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRNITDIDDKII+RA +        +    +  +  +       +L  L PT +PRAT
Sbjct: 61  TFVRNITDIDDKIIKRANEN------GETTDKLVERTIKSMHDAFDKLNILRPTKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+MI +I+ ++  G AY+  N ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 QTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TINE++E        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           VIR  +  T YR  I+++ + L  A   + +               P  ++     +   
Sbjct: 287 VIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDASE---YEEKF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           + A+ ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 344 IKAMDNDFNTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDIEEYF 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    ++S  IEKL+ ER    K K ++ AD IR  L+++G ILED
Sbjct: 404 KQGDGIDVS-EIEKLIAERTQAKKDKNYARADEIRNDLQNQGIILED 449


>gi|73540824|ref|YP_295344.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|109894927|sp|Q473D3|SYC_RALEJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72118237|gb|AAZ60500.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 462

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 179/464 (38%), Positives = 252/464 (54%), Gaps = 40/464 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    + 
Sbjct: 4   LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+NITDIDDKII RA +        + I  +T++  Q   +D   L  + P H+PR
Sbjct: 63  -VTFVQNITDIDDKIIRRAAEN------GETIGQLTTRFIQYMHEDADALGIVRPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ LI  +  +G AY+A + ++ +       YG  S + +++ + G RV    
Sbjct: 116 ATDYVPQMLDLIGKLEANGLAYQATDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVTAND 175

Query: 184 HKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK    S P E  W S WG GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKESEPPESKWNSKWGMGRPGWHIECSAMSCTLLGEHFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +   N+W+HNGF+ +   KMSKS GNF TI E+L       +
Sbjct: 236 QFPHHENEIAQSEGASG-KPFVNVWMHNGFVRVNDEKMSKSLGNFFTIREVL-------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------PA 350
            + A V+R  +L  HYR P++++   L +A   L++       T      +D        
Sbjct: 288 EYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDTQPGGYAVDWEEAHAKR 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEH-------- 400
              A+ +D NT  A+  L  LA E  +    +        A  LG+     H        
Sbjct: 348 FAEAMCDDFNTPIAVSVLFDLASEVNRTGSSVAARQLKGLAGTLGLLERDPHTFLQGGKK 407

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ++      IE L+  R      + F+ AD IR  L + G +LED
Sbjct: 408 VDGPSPDEIEGLIAARKTAKAERNFAEADRIRADLLAAGIVLED 451


>gi|16763917|ref|NP_459532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|62179146|ref|YP_215563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167990531|ref|ZP_02571631.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168231534|ref|ZP_02656592.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168261021|ref|ZP_02682994.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168818841|ref|ZP_02830841.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194472796|ref|ZP_03078780.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197251404|ref|YP_002145520.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205351838|ref|YP_002225639.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856015|ref|YP_002242666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224582374|ref|YP_002636172.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911333|ref|ZP_04655170.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|21264009|sp|Q8ZR68|SYC_SALTY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81309761|sp|Q57S29|SYC_SALCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710849|sp|B5EYD7|SYC_SALA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710851|sp|B5R6X0|SYC_SALG2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558784|sp|B5QUV0|SYC_SALEP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781692|sp|C0PVI8|SYC_SALPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|16419048|gb|AAL19491.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|62126779|gb|AAX64482.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194459160|gb|EDX47999.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197215107|gb|ACH52504.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205271619|emb|CAR36445.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205330830|gb|EDZ17594.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205333999|gb|EDZ20763.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205343946|gb|EDZ30710.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205349964|gb|EDZ36595.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206707818|emb|CAR32103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224466901|gb|ACN44731.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245816|emb|CBG23614.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992259|gb|ACY87144.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157145|emb|CBW16629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911570|dbj|BAJ35544.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320084812|emb|CBY94602.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226119|gb|EFX51170.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713608|gb|EFZ05179.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323128857|gb|ADX16287.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987486|gb|AEF06469.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 461

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
           + +D NT  A   L  +ARE    K  D+      ++H+  I      L +   +     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 408 ---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLAEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|161504307|ref|YP_001571419.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|187631629|sp|A9MLA7|SYC_SALAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160865654|gb|ABX22277.1| hypothetical protein SARI_02415 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 461

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 268/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIEITRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNK--------- 403
           + +D NT  A   L  +ARE    K+ D+      ++H+  I      L +         
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKSEDMTAANAMASHLRKISGVLGLLEQEPDAFLQSG 405

Query: 404 ----NISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               +  +A IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 479

 Score =  305 bits (782), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 181/471 (38%), Positives = 258/471 (54%), Gaps = 47/471 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  ++P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 16  ESLRIYNTLARDKQTFVPLEPGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 75

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +  Q   +D   L    P  +
Sbjct: 76  Q--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIQALHEDADALGIARPDME 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +   G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 128 PRATDFIPQMLGMIEKLEEKGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 187

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK+S   EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 188 NDAKEDPLDFVLWKQSKADEPADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIHGGGQ 247

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 248 DLQFPHHENEIAQSEAATG-QPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 301

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  +   HYR P++++   + +A   L +   T+      D A L      
Sbjct: 302 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRL-YTALKDVTPDGAALDWNEAH 358

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHLN 402
                +A+ +D NT  A+  L +LA E  +  D      L    A   +LG E  + +L 
Sbjct: 359 AQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGRE-PRAYLQ 417

Query: 403 KNIS---------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +             AIE  + ER+   + K +++AD IR +L   G  LED
Sbjct: 418 QAAGAAVQGALEPAAIEAKIAERVAAKQAKDYAAADRIRAELLEAGVALED 468


>gi|259500940|ref|ZP_05743842.1| cysteine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190608|ref|ZP_07266862.1| cysteinyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167634|gb|EEW52129.1| cysteine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 470

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 181/477 (37%), Positives = 262/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLKQAEAVLKRYKNILRNIKERLSEKNDVSDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L               KN HD + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLHDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|227873421|ref|ZP_03991676.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840726|gb|EEJ51101.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
          Length = 468

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 183/488 (37%), Positives = 257/488 (52%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ ++  EF  I+   IRMYVCGPTVY+  HIGNARPMIVFD   R + Y   + 
Sbjct: 1   MKIYNTMSKQKEEFVPIEEGKIRMYVCGPTVYNLIHIGNARPMIVFDTFRRFMEYKGYKV 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
           C  YV N TD+DDKII+ A  E          S IT +   +  KD + L  +  T  P+
Sbjct: 61  C--YVSNYTDVDDKIIKTAMDEGTDC------SSITERYISEVEKDMSDLNIMEATAHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ LI  ++  G AY  +  + +DT++ P+YG  S + +++ + G R   V  
Sbjct: 113 ATEEIQGMVNLIDVLVKKGFAYPVDGTVYYDTTAFPSYGKLSHKNMEDLRSGLRELKVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  KK+P DF+LWK     EP W SPW  GRPGWH EC  M+  Y G   DIH GG DL+
Sbjct: 173 EEEKKSPTDFVLWKPKKMGEPYWNSPWSEGRPGWHTECCVMAPKYCGGALDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ   A   E+ A  W+HN F+N++ +KMSKS GNF T+ ++  T +F    
Sbjct: 233 FPHHENEIAQYEAA-HGEQFARYWMHNAFINIDNKKMSKSLGNFFTVRDV--TSQF---- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAE-----ILLSKW------------------- 337
               V+R  ML  HYR P++F+   +  A+     IL + W                   
Sbjct: 286 -DPMVLRFYMLSAHYRSPLNFSKDLMEAAKTSLGRILTAIWRLQDLIPRLEEKAFSKEEE 344

Query: 338 PQTSTSKGIIDPAVLSA-LYNDLNTVSAIQALHKLAR--------ESTKNHD--LLPIFN 386
               T++G    A+ S  + +DLNT  AI  + +L R         S+K +   LL    
Sbjct: 345 ENVKTAEGY--EAIFSEKMEDDLNTADAITQIFELVRLANATVEEHSSKAYGEALLQKLE 402

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               +LGI   K+   + +   +E L+Q+R    K K F+ AD IR +L + G  L+D +
Sbjct: 403 TLMAVLGIRTEKKE--EELGAKVEALIQQRQDARKNKDFAKADQIRDELLAMGIQLKDTR 460

Query: 447 NPDNGQRM 454
           N    Q++
Sbjct: 461 NGVEWQKI 468


>gi|300704462|ref|YP_003746065.1| cysteine tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072126|emb|CBJ43458.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
          Length = 465

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 177/476 (37%), Positives = 253/476 (53%), Gaps = 57/476 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-Y 61
           + +KIYNTL R+   F  I+   +RMYVCG TVYD+ H+G+AR M+VFD++ R LR   Y
Sbjct: 2   ESLKIYNTLAREKQTFVPIESGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P H
Sbjct: 62  G---VTYVRNITDIDDKIIKRA------VENGETIGALTDRFIAAMHEDADALGVQRPDH 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT ++PQM+ +I  +  +G AY+A + ++ +       YG  S + +++ + G RV 
Sbjct: 113 EPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFAGYGKLSGKSLEDLRAGERVA 172

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG
Sbjct: 173 ANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L+    
Sbjct: 233 ADLQFPHHENEIAQAEGANG-NTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKV--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTS 343
               +   V+R  +L +HYR  ++++   L +A   L++               P  S S
Sbjct: 289 ----YDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSES 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------------DLLPIFNASAHI 391
            G        A+ +D NT  A+  L +LA E  K               ++ +     H 
Sbjct: 345 HG---QRFREAMNDDFNTPVAMAVLFELASEVNKTRSAALASQLAALGGVMGLLGRDPHA 401

Query: 392 L---GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               G+    + L+   +  +E  ++ R +    + F+ AD IR  L + G +LED
Sbjct: 402 FLQGGVGAAADGLD---TAEVEARIEARRVAKAARDFARADGIRADLLAAGIVLED 454


>gi|322386163|ref|ZP_08059796.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269743|gb|EFX52670.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 447

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 176/468 (37%), Positives = 254/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  +         +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGITS------QEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVEFMGDIIRFVEDLIDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVL--- 352
               V+R      HYR+PI+FT + + +A   L       + P T  ++     A L   
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVYDAATNLKYLKNTYEQPFTGQAESAQLQAFLDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAKVKAALAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|254166931|ref|ZP_04873785.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596106|ref|YP_003482802.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624541|gb|EDY37102.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533893|gb|ADD08240.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 455

 Score =  305 bits (782), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 188/465 (40%), Positives = 250/465 (53%), Gaps = 41/465 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL  +  EF  +    + +YVCGPT YD+AHIG+ARP I+FD+  R L Y   + 
Sbjct: 1   MKIYDTLSGEKKEFVPVHEGRVGIYVCGPTTYDYAHIGHARPAILFDIFRRFLEYMGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  + NITD+DDKII +A  E    PI      +     ++++KD   L        P+
Sbjct: 60  -VILISNITDVDDKIINKA-NELGKDPIE-----MAHYYAREYLKDMDALRVRRANIIPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I LI+ ++  G+AYE+  ++ F      +YG  S RKI++   G RV     
Sbjct: 113 ATRHIEEIINLIKTLVDKGYAYESGGDVYFSVKKFKDYGKLSHRKIEDMLAGARVEVNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS +YLG   DIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKASKPGEPSWQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G +  E  KMSKS GN   I + L       + +PA
Sbjct: 233 HENEIAQSEAATG-KPFSKYWMHVGLVRFEKEKMSKSIGNVFLIKDFL-------KKYPA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKG-------------IIDPA 350
            V+RL  L +HYR+P DF+ + + EA  LL K W      K               ID  
Sbjct: 285 EVLRLMYLNSHYRKPYDFSEKNIEEALPLLEKIWSTYQILKNSAMQEEPSEEVIEEIDSV 344

Query: 351 ---VLSALYNDLNTVSAIQ---ALHKLARESTKNHDLLPIFN---ASAHILGIEVCKEHL 401
              +++AL +D NT  A++   +    ARE  K  D L   N       I  I    ++ 
Sbjct: 345 RKKIIAALEDDFNTREAMKEYLSFINFARE-LKGGDALAALNFLKEMDEIFDILPRGDNE 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            K  S  IE L+  R    K K +  ADYIR +LE  G  +ED K
Sbjct: 404 GKE-SELIELLLNVRNEERKRKNYEIADYIRDELEKIGIKIEDTK 447


>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 480

 Score =  305 bits (781), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 187/494 (37%), Positives = 259/494 (52%), Gaps = 58/494 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++Y+TL      F+ I    I +YVCG TVYD+ H+G+AR M+ FDV+ R LR   
Sbjct: 8   QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII+RA          + I+ +T +      +D   L C +P  
Sbjct: 68  YQ--VNYVRNITDIDDKIIQRAYDN------GETITELTDRFITAMHQDEQFLGCQSPNI 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           +PRAT HI  M +LI  ++    AY+ +  ++ +     PNYG  S+R +D+ + G   R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG+ FDIHGGG 
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI E+++     
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVD----- 293

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIID------- 348
              +    IR  +L +HYR P++F+   L E+   LS+  Q+  S    G+I        
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351

Query: 349 ----PAVLSALYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFNASAHILGIE 395
                A   A+ +D NT  A+  L  +         A E  K           A +L I 
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411

Query: 396 VCKEH--LNKNIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               H  L  NI           I   + +R      K F+ AD IR +L  +G  LED 
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELED- 470

Query: 446 KNPDNGQRMTRWKQ 459
                G+  T W++
Sbjct: 471 -----GRMGTTWRR 479


>gi|160872079|ref|ZP_02062211.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120878|gb|EDP46216.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
          Length = 466

 Score =  305 bits (781), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 189/488 (38%), Positives = 266/488 (54%), Gaps = 55/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K   F+ +    + MYVCG TVYDF HIG+AR ++VFDV+ R L+    + 
Sbjct: 2   LKIYNTLTQKKEAFKPMIAKKVGMYVCGMTVYDFCHIGHARVVVVFDVILRYLKMQGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII+RA QE+   P       +T +  +   +D  RL  L P  +P+
Sbjct: 61  -VNYIRNITDIDDKIIKRA-QENNESPFE-----LTQRMIKAMHEDFNRLNTLPPNAEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ I  +I LIQ ++   +AY + N +I FD      YG  + + + + + G RV    
Sbjct: 114 ATDAIVYIIALIQRLVDKAYAYRSENGDICFDVKKFKTYGDLAHQNVQKLRRGLRVAVDI 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK++   EP WESPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+FP
Sbjct: 174 TKKDPLDFVLWKKAKSGEPSWESPWGPGRPGWHIECSAMSMAALGEHFDIHGGGLDLVFP 233

Query: 244 HHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HH+NEIAQS    D+  K  N WIH GF+ ++ +KMSKS GNF T+ ++L       + +
Sbjct: 234 HHQNEIAQSEGVTDK--KFVNTWIHVGFVQIDRQKMSKSLGNFFTLRDVL-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEI-----------LLSKWPQT---STSKGIID 348
           PA V+R  ++ +HYR PI ++++ L  A+            L+ K PQ      S     
Sbjct: 285 PAEVVRYFLISSHYRSPIQYSLENLQAAQAALQRLYTSLRGLVGKGPQKFVLEESSKEYQ 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLA------RESTKNHDL--LPIFNASAHILGI------ 394
                A+ +D NT  A+  L +LA      RE+   H           A +LGI      
Sbjct: 345 EKFEHAMNDDFNTPDALAILFELARRINRLRETNSKHAQRDANCLQYLASLLGILQQEPE 404

Query: 395 EVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           +  K +  K+  +   I  L+  R      K +  AD IR +L +   +LED        
Sbjct: 405 QFLKLNQEKDPHLVEKINGLMNARNHARAAKNWQEADRIRDELLALNIVLEDTTTG---- 460

Query: 453 RMTRWKQK 460
             T+W++K
Sbjct: 461 --TQWRRK 466


>gi|313114813|ref|ZP_07800313.1| cysteinyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622868|gb|EFQ06323.1| cysteinyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 465

 Score =  305 bits (781), Expect = 9e-81,   Method: Compositional matrix adjust.
 Identities = 185/473 (39%), Positives = 267/473 (56%), Gaps = 51/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y  G K
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYR-GNK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E  S+        +  +   +++KD   L C  PT QPR
Sbjct: 60  -VFYVSNITDIDDKLIKKGQEEGTSM------KEVAQRFEAEYLKDAAGLNCKKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI Q++ +++++I  GHAY A N ++ F   S P YG  S  K+D+ + G R     
Sbjct: 113 ATEHIQQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172

Query: 184 H----KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MDDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A  W+HNGF+N++ +KMSKS  NF T+ ++ +   +  
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDVADVYGY-- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------PQTSTSKGI 346
                  IR  ML   YR P+++TV  +   +  L +                  T + +
Sbjct: 290 -----EPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALTKDAFGTDETL 344

Query: 347 IDPAV------LSALYNDLNTVSAIQALHKLARE-----STKNHDLL----PIFNASAHI 391
            + A        +A+ +DLNT  A+ A+  L +E     +  + D L      F+    +
Sbjct: 345 KEKAAEARTKFCTAMDDDLNTPDALAAVFDLVKEINTLSAVSSKDALQTAAAAFDEITGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D
Sbjct: 405 LGLLYNRK--KDEVPAEVTELVEKRAAAKKAKDWATADAIRAQLTELGWAVKD 455


>gi|323700147|ref|ZP_08112059.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 485

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 184/484 (38%), Positives = 253/484 (52%), Gaps = 67/484 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL+R+  EF     +++ MYVCG T YD  HIG+AR  +VFDVLYR L++   + 
Sbjct: 1   MRLYNTLKRRKEEFTPAHNNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLKHEGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN TDIDDKII+RA +      +    S I  K   +F  D  RL    P+ +P+
Sbjct: 60  -VNFIRNFTDIDDKIIKRANE------VGKEASEIAEKFIGEFYVDMDRLNIERPSVEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+MI L Q +I  GHAY   + ++ F   S   YG  S R IDE + G R+    
Sbjct: 113 CTEHIPEMIALTQRLIDKGHAYATPSGDVYFKVRSFEGYGKLSGRNIDELESGARIAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWH+ECSAMS  Y     DIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPFWESPWGKGRPGWHLECSAMSEKYADLPLDIHGGGQDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   +  AN W+HNGF+ +   KMSKS GNF TI ++L         + 
Sbjct: 233 HHENEVAQSEAATG-KPFANYWVHNGFVQINSEKMSKSLGNFFTIRDILA-------KFL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA----------------EILLSKWPQTSTSKGII 347
              +R  +L  HYR P+DF+   L EA                E+   KW ++   + ++
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFDALEEAEKGLKRIYSALNQIDEELARDKWKKSPFPEELV 344

Query: 348 ------DPAVLSALYNDLNTV-------SAIQALHKLA-----RESTKNHDLLPIFNAS- 388
                 +     A+ +DLNT        SAI+   ++A     R+S    DL     A  
Sbjct: 345 KELDDLEKHFAEAMADDLNTAGALGHVFSAIRLAGRVAEDKNLRKSEGGRDLFARIKADM 404

Query: 389 ---AHILGI------EVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRK 433
              A +LGI      E   E  +   + A      + +L+  R    K K F+ +D IR 
Sbjct: 405 ADWASVLGIFERKPAEFLLELRDSRAARAGIDPAKVRELLDARAQARKDKDFARSDAIRD 464

Query: 434 QLES 437
           +L +
Sbjct: 465 ELAA 468


>gi|261409541|ref|YP_003245782.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261286004|gb|ACX67975.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 468

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 257/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F A +P  +++YVCGPTVYD+ HIGNARPMI FDV+    R Y+  +
Sbjct: 3   LQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVV----RAYFENQ 58

Query: 65  C--VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I +A Q   ++P       +  K    + +D   L     T  
Sbjct: 59  GNDVNYVVNFTDVDDKMIRKAEQTGTTVPE------VAEKFINAYYEDLDGLGIPRATLN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T+++  +I  IQ +I    AYE   ++ + T    +YG  S++ +DE + G R+   
Sbjct: 113 PRVTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL F
Sbjct: 173 KRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE E+AQS      +  AN W+HNG++ +   KMSKS GN + + EL E        +
Sbjct: 233 PHHECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QY 284

Query: 303 PAPVIRLAMLMTHYREPIDF----------TVQRLTEAE---------ILLSKWPQTSTS 343
               +R  ML THYR P+++          +V+RL  A           + SK  Q S  
Sbjct: 285 TKEAVRYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGTAIGSKDDQVSQD 344

Query: 344 KGIIDPAVL----SALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNAS 388
                 AVL      + +D NT  AI A+ + A E+ +            H++L  FN  
Sbjct: 345 VADKISAVLVEFHEKMQDDFNTPDAITAMFQWASEANQLLKEASIPAADLHEVLRAFNEM 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +L   +     ++ +   IE L+ ER+   K K ++ AD IR +L  +G +LE     
Sbjct: 405 NGVL--RIVNNGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLE----- 457

Query: 449 DNGQRMTRWKQK 460
           D  Q M RW++K
Sbjct: 458 DTAQGM-RWRRK 468


>gi|329925602|ref|ZP_08280443.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939731|gb|EGG36073.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 468

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 257/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F A +P  +++YVCGPTVYD+ HIGNARPMI FDV+    R Y+  +
Sbjct: 3   LQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVV----RAYFENQ 58

Query: 65  C--VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I +A Q   ++P       +  K    + +D   L     T  
Sbjct: 59  GNDVNYVVNFTDVDDKMIRKAEQTGTTVPE------VAEKFINAYYEDLDGLGIPRATLN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T+++  +I  IQ +I    AYE   ++ + T    +YG  S++ +DE + G R+   
Sbjct: 113 PRVTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL F
Sbjct: 173 KRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE E+AQS      +  AN W+HNG++ +   KMSKS GN + + EL E        +
Sbjct: 233 PHHECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QY 284

Query: 303 PAPVIRLAMLMTHYREPIDF----------TVQRLTEAE---------ILLSKWPQTSTS 343
               +R  ML THYR P+++          +V+RL  A           + SK  Q S  
Sbjct: 285 TKEAVRYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGTAIGSKDDQVSQD 344

Query: 344 KGIIDPAVL----SALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNAS 388
                 AVL      + +D NT  AI A+ + A E+ +            H++L  FN  
Sbjct: 345 VADKISAVLVEFHEKMQDDFNTPDAITAMFQWASEANQLLKEASIPAANLHEVLRAFNEM 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +L   +     ++ +   IE L+ ER+   K K ++ AD IR +L  +G +LE     
Sbjct: 405 NSVL--RIVNTGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLE----- 457

Query: 449 DNGQRMTRWKQK 460
           D  Q M RW++K
Sbjct: 458 DTAQGM-RWRRK 468


>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 461

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 181/485 (37%), Positives = 257/485 (52%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA      I   +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A+N +++F   + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSSCA-HDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
              +R  ++  HYR  ++++   L +A   L +     T+    D +V +          
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALDR---LYTALRGTDASVAAHGGDEFEARF 342

Query: 354 --ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLN 402
             A+ +D NT  A   L  +ARE  +         + L       + +LG +E   E   
Sbjct: 343 REAMDDDFNTPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFL 402

Query: 403 KNISIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +N +         IE L+Q+R      K ++ AD  R +L   G +LED      G + T
Sbjct: 403 QNGAQVDDEEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGT 456

Query: 456 RWKQK 460
            W++K
Sbjct: 457 IWRRK 461


>gi|257871414|ref|ZP_05651067.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805578|gb|EEV34400.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 469

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 187/492 (38%), Positives = 267/492 (54%), Gaps = 63/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK   FQ ++   ++MYVCGPTVY++ H+GN R ++ FD + R L Y   E 
Sbjct: 2   IKIYNTLTRKKEVFQPLEQGRVKMYVCGPTVYNYIHVGNGRSVVSFDTIRRYLEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A++   S P       I  +  + F KDT  L     T  PR
Sbjct: 61  -VDYVMNFTDVDDKIIRTAKELKTSAPE------IADRFIEAFNKDTAALNVQPATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
             +HI  +I  IQ ++  G+AY ANN++ + T    +YG  S + IDE ++G   R  E+
Sbjct: 114 VMDHIEDIIAFIQVLVDKGYAYMANNDVYYRTRKFKHYGQLSDQSIDELEVGASQRTGEE 173

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W+SPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKENEIAWDSPWGLGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS    +  KT AN W+HNG++ +  E  KMSKS GNF+T++E+++     
Sbjct: 234 FPHHENEIAQSEA--KTGKTFANYWMHNGYVTIGEEEEKMSKSLGNFVTVHEMVQ----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI--- 346
                  V+R  +  T YR PI ++   L EAE  L K         +   ++ +G    
Sbjct: 287 --KIDPQVLRFFLATTQYRRPIKYSETTLKEAETNLQKLRTALENAQFRLQNSKEGFPEG 344

Query: 347 IDPAVLS--------ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPI----FNA 387
            D A+L+         + +D N  + I  +++LA+        ++ + +LL      F  
Sbjct: 345 TDHAILAEFEQRFVQEMDDDFNAANGITVVYELAKWLNTYSESASIDIELLTAAVEKFKE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER+   + + F+ +D IR  L+ KG ILED   
Sbjct: 405 WLAIFGIYFVGEEL---LDEEIEQLIEERIQARQARDFARSDEIRDVLKEKGIILEDTAQ 461

Query: 448 PDNGQRMTRWKQ 459
                  TRW++
Sbjct: 462 G------TRWRR 467


>gi|296101636|ref|YP_003611782.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056095|gb|ADF60833.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 461

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 183/482 (37%), Positives = 262/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 60  NLKYVRNITDIDDKIIKRANEN------GESFVALVDRMIVEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   + P YGS SR+ +D+ + G RV    
Sbjct: 114 ATHHIHEIIDITEKLIARGHAYVADNGDVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LGK FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGI-------IDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +       T K +        +   +  
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVEAAGGEAFEARFVEV 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILGI--------EVCK 398
           + +D NT  A   L  +ARE    K+ D+      +AH      +LG+            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALAAHLRKLSSVLGLLEQEPDAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+  RL   + K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALINARLEARQAKDWAAADAARNRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|332365578|gb|EGJ43338.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 447

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 178/468 (38%), Positives = 251/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKKEGIT-PKE-----VADKYIAAFHEDVTALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVAKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN-- 357
               V+R      HYR+PI+FT + + +A   L     T      G  D A L A  +  
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 358 ------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
                 D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRNELAAQGIKLLDTK---DGVRWTR 446


>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 460

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 186/484 (38%), Positives = 268/484 (55%), Gaps = 53/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGEMHADFDALGMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A+N +++F+ S   +YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKFEDYGRLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
              +R  ++  HYR  ++++ + L +A   L +     TS   +D +V +          
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEENLKQARSALER---LYTSLRGLDTSVEAAGGEEFVARF 342

Query: 354 --ALYNDLNTVSAIQALHKLARE--STKNHDLLP--IFNAS----AHILGI------EVC 397
             A+ +D NT  A   L  +ARE    K  D+    +  A     A +LG+         
Sbjct: 343 KEAMDDDFNTPEAYSVLFDMAREINRLKADDVAAASVLGARMRELADVLGLLSQEPETFL 402

Query: 398 KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    ++  +A IE L+Q+RL     K +++AD  R +L + G ILED      G + T 
Sbjct: 403 QGGAGEDDDVAEIEALIQQRLDARAAKDWAAADEARDKLMAMGIILED------GAQGTT 456

Query: 457 WKQK 460
           W++K
Sbjct: 457 WRRK 460


>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 461

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 181/485 (37%), Positives = 257/485 (52%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA      I   +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A+N +++F   + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSSCA-HDGSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
              +R  ++  HYR  ++++   L +A   L +     T+    D +V +          
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALDR---LYTALRGTDASVAAHGGDEFEARF 342

Query: 354 --ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLN 402
             A+ +D NT  A   L  +ARE  +         + L       + +LG +E   E   
Sbjct: 343 REAMDDDFNTPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFL 402

Query: 403 KNISIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +N +         IE L+Q+R      K ++ AD  R +L   G +LED      G + T
Sbjct: 403 QNGAQVDDDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGT 456

Query: 456 RWKQK 460
            W++K
Sbjct: 457 IWRRK 461


>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257998|gb|EDS71964.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
           17244]
          Length = 468

 Score =  305 bits (781), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 176/474 (37%), Positives = 260/474 (54%), Gaps = 51/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF  I+   + MYVCGPTVY+F HIGNARP I+FD L R L Y  G K
Sbjct: 1   MKLYNTLTRKKEEFVPINEGEVNMYVCGPTVYNFFHIGNARPFIIFDTLRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII +A++EH +         +  K  +++  D   L     T  PR
Sbjct: 60  -VNYVQNFTDIDDKIINKAKEEHTTSKA------VADKYIKEYFTDAKGLGIKEATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  I  +I LI ++  +G+AY  +  + +  S   +YG  S++ IDE   G RV     
Sbjct: 113 VSECIGDIIDLISDLEKNGYAYNVDGNVYYRVSKFKDYGKLSKKPIDELISGARVEVNDE 172

Query: 185 KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           K++P DF LWK+     E  ++SPWG+GRPGWHIECSAMS  YLG   DIHGGG DLIFP
Sbjct: 173 KESPLDFALWKKQKEDSEIAFDSPWGKGRPGWHIECSAMSRKYLGSTIDIHGGGEDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+  +   + ++HNG++N+   KMSKS GNF  + ++        + + 
Sbjct: 233 HHENEIAQSEGANG-KDFVHYFVHNGYININNEKMSKSKGNFFMVRDI-------SKDFD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPA------------ 350
             V+RL ML  HY+ P++F+   L + +  L++   T  +   ++D A            
Sbjct: 285 LEVVRLFMLSAHYKTPVNFSFDILKQTQSGLNRLYNTKENLLYLLDKAKDKDLKEDEKEF 344

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                       +A+ +D+NT +A+  ++ L+++   N +             ++     
Sbjct: 345 INSLPKYREEFKNAMEDDINTANAVSTIYDLSKDINSNVNENSSKEMIMKSYEMYMELNG 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LG+ + KE  ++ +   I +L+++R    K K F+ AD IR  L  KG +LED
Sbjct: 405 VLGL-LTKEKEDEILEDEIIELIEKRQNARKNKDFALADKIRDDLLDKGIVLED 457


>gi|269217196|ref|ZP_06161050.1| cysteine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129333|gb|EEZ60418.1| cysteine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 503

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 180/503 (35%), Positives = 257/503 (51%), Gaps = 79/503 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T      +F  ++   IRMYVCGPTVY++ HIGNAR  I FDV+ R L +   + 
Sbjct: 4   IRLYDTQSHAKRDFHPVEEGKIRMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGFD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII++A +E  S       + + ++ T+ F+ D      L P  +PR
Sbjct: 63  -VTFVQNVTDVDDKIIKKANEEGRSA------AEVAAEYTEAFIADMHAAGVLDPDIRPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
           AT  I  MI L+  ++  GHAYE   ++ F   S P YG+ S R +D+ + G R      
Sbjct: 116 ATEEIDAMIDLVGRLVDAGHAYEVEGDVYFGVRSFPAYGALSNRNVDDLEGGHRELRADG 175

Query: 182 ---KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              +  K++  DF +WK + P EP W+SPWG+GRPGWHIECSAMS  YLG   DIHGGG 
Sbjct: 176 QGLEGRKRDELDFAVWKAAKPGEPSWDSPWGKGRPGWHIECSAMSRMYLGLPLDIHGGGS 235

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   E   N W+H G L +   KMSKS GNF+ + ++L+T    
Sbjct: 236 DLVFPHHENEIAQSEAA-YGETFCNYWMHGGMLQINQEKMSKSLGNFLLLRDVLKTTD-- 292

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------W----PQTSTSKG 345
                A V+R+ ML THYR P+DF  +RL EA   L +         W    P      G
Sbjct: 293 -----ARVLRMLMLQTHYRSPLDFNDERLDEAASSLERVENFIDRMDWLVKHPVEGEGIG 347

Query: 346 I---------IDPAVLSALYNDLNTVSAIQALHK--------LARESTKNHDLLPIFNAS 388
                     +    ++A+ +D NT  A+ AL          L   S    D+    +A 
Sbjct: 348 TQAFSVPLQALREGFVAAMDDDFNTAGALGALFSCINDVNAALGTASLGRGDIEAASDAR 407

Query: 389 AHIL------GIEVCKEHLN---------------------KNISIAIEKLVQERLILLK 421
             ++      GI+V     +                      +   A+E L++ R     
Sbjct: 408 DAVVELFGVFGIDVPGRATDAQDAYPAEVVALAREIASFEGDDAQAAVEALLETRAQARA 467

Query: 422 MKKFSSADYIRKQLESKGFILED 444
            K ++ AD +R  + + GF++ED
Sbjct: 468 SKMWAVADAVRDGMGALGFVIED 490


>gi|238916434|ref|YP_002929951.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|259511832|sp|C4Z3N5|SYC_EUBE2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|238871794|gb|ACR71504.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 472

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 188/496 (37%), Positives = 260/496 (52%), Gaps = 69/496 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ ++   ++MYVCGPTVY+  HIGNARPMIVFD + R L Y   + 
Sbjct: 1   MRIYNTLSRRKEEFKPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S         I+++   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVSA------EEISTRYIAECKKDMEGMNIKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
           AT  I  MI +IQ +I  G+AYE N  + + T     YG  S++ ID+ + G R      
Sbjct: 113 ATQEIGGMIDMIQTLIDKGYAYEVNGTVYYRTRKFAEYGKLSKKNIDDLEAGHRDEAHSL 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            V  +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YL    DIH GG
Sbjct: 173 KVTGEDEKEDPLDFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLADEIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENEIAQS  A+ +   +  W+HN FLN++ +KMSKS GNF T+ ++      
Sbjct: 233 EDLIFPHHENEIAQSEAANGV-PFSKYWMHNAFLNIDNKKMSKSLGNFFTVRDI------ 285

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------QT 340
             R +   V+R  ML  HYR P++F+   +  A+  L +                    T
Sbjct: 286 -SREYDLEVLRFFMLSAHYRNPVNFSHDLMESAKNGLDRILTAVDNLRHLSENAKDVIMT 344

Query: 341 STSKGIIDPAVLSALY--------NDLNTVSAIQALHKLARESTKN----------HDLL 382
              K II  A +  +Y        +D NT  AI A+ +L + +  N            L+
Sbjct: 345 EDEKKII--ASIDDIYKKFEDSMDDDFNTADAISAIFELVKLANSNSSSDNSKEYIDTLM 402

Query: 383 PIFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                   ILG++  K  E L+++    IE L+ ER    K K F+ AD IR +L +KG 
Sbjct: 403 KKITTLTDILGLKTDKKEEMLDED----IEALIAERQQARKDKNFARADEIRDELLAKGI 458

Query: 441 ILEDYKNPDNGQRMTR 456
           +L+D +    G R +R
Sbjct: 459 VLKDTR---EGVRWSR 471


>gi|182683526|ref|YP_001835273.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303253920|ref|ZP_07340041.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260086|ref|ZP_07346059.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261270|ref|ZP_07347218.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263935|ref|ZP_07349856.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265926|ref|ZP_07351822.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268308|ref|ZP_07354105.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|182628860|gb|ACB89808.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301801464|emb|CBW34156.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302599096|gb|EFL66121.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637404|gb|EFL67891.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638781|gb|EFL69243.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642146|gb|EFL72496.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644510|gb|EFL74761.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646340|gb|EFL76566.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 447

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 183/469 (39%), Positives = 256/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++A+  ++ N+D   +  A A    I GI   +E L+ +   
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAD--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|309781263|ref|ZP_07676000.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308920084|gb|EFP65744.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 463

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 185/468 (39%), Positives = 264/468 (56%), Gaps = 43/468 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + +S +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETMSALTGRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG+ FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHHENEIAQS  A    KT  N W+HNGF+ +   KMSKS GNF TI ++L+    
Sbjct: 234 DLQFPHHENEIAQSEGA--TGKTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKL--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA 350
               + A V+R  +L +HYR  ++++   L +A   L++        P  + +K   + +
Sbjct: 289 ----YDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNES 344

Query: 351 ----VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH--LN 402
                L A+ +D NT  A+  L +LA E   T++  L     A A +LG+     H  L 
Sbjct: 345 HGKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPALASQLAALAGVLGLLGRDPHAFLQ 404

Query: 403 KNIS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +S        +E  ++ER      + F+ AD IR  L + G +LED
Sbjct: 405 GGVSPDGLDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLED 452


>gi|322377813|ref|ZP_08052302.1| cysteine--tRNA ligase [Streptococcus sp. M334]
 gi|321281236|gb|EFX58247.1| cysteine--tRNA ligase [Streptococcus sp. M334]
          Length = 447

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 177/469 (37%), Positives = 254/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +D   L      
Sbjct: 286 -LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQTFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+  D N  + I  + ++A+  ++ N+D  +     +   + GI   +E L+     
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALASMLEVFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|322374782|ref|ZP_08049296.1| cysteine--tRNA ligase [Streptococcus sp. C300]
 gi|321280282|gb|EFX57321.1| cysteine--tRNA ligase [Streptococcus sp. C300]
          Length = 447

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 177/469 (37%), Positives = 254/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID--------PA 350
                V+R      HYR+PI+FT + + +AE  L     T      G +D          
Sbjct: 286 -LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDIQELQDFKDK 344

Query: 351 VLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
            ++A+  D N  + I  + ++A+  ++ N+D  +     A   + GI   +E L+     
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IETLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|331266879|ref|YP_004326509.1| cysteinyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683551|emb|CBZ01169.1| cysteinyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 447

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 179/469 (38%), Positives = 256/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKTAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN WIHNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWIHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS--KWPQTSTSKGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L   K        G +D   L      
Sbjct: 286 -IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKITYEQPFTGNVDTQELQDFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+  D N+ + I  + ++A+  ++ N+D  +     A   + GI   +E L+ +   
Sbjct: 345 FVAAMDEDFNSANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDAD--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 491

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 154/316 (48%), Positives = 202/316 (63%), Gaps = 21/316 (6%)

Query: 18  FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           FQ I P  + MYVCG T YD++HIG+AR  + FDVL+R L+    +  VTYVRN TDIDD
Sbjct: 8   FQPIVPGKVSMYVCGVTTYDYSHIGHARVYVAFDVLFRYLKSVGYD--VTYVRNFTDIDD 65

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KII+RA  E    P+N     ++ +   +F  D   L CL P  +PR ++HIPQ+I +I 
Sbjct: 66  KIIKRA-NEVGEDPLN-----LSRRFCDEFQVDMELLRCLPPNVEPRVSDHIPQIIKMIS 119

Query: 138 NIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
            II + + Y     ++ F+  ++P YG  S RK +E + G RV     K+NPADF LWK 
Sbjct: 120 QIIENKNGYVMEGGDVYFEVDTLPTYGCLSGRKQEENRAGERVLVDNRKRNPADFALWKS 179

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC--C 254
           + P EP W+SPWG GRPGWHIECSAMS+ +LG  FDIHGGG+DLIFPHHENEIAQSC  C
Sbjct: 180 AKPGEPAWDSPWGPGRPGWHIECSAMSAEHLGHKFDIHGGGMDLIFPHHENEIAQSCAAC 239

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           AD        W+HNGF+ ++  KMSKS GNF TI E+LE        +    +R  +L T
Sbjct: 240 AD---SRVGYWLHNGFVTVDNEKMSKSVGNFFTIREVLEL-------YHPLALRWFLLGT 289

Query: 315 HYREPIDFTVQRLTEA 330
           HYR P++++ ++L  A
Sbjct: 290 HYRAPVNYSKRQLEVA 305


>gi|299533876|ref|ZP_07047243.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718160|gb|EFI59150.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 461

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 180/468 (38%), Positives = 256/468 (54%), Gaps = 50/468 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R +  F  ++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR   G K
Sbjct: 3   LRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRAS-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PT +PR
Sbjct: 62  -VTYVRNITDIDDKIIKRA------VENGETIRSLTDRMIDALHQDADALGIERPTLEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV    
Sbjct: 115 ATEYVPQMLGMIARLQDKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAVAD 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   EP    W+SP+G GRPGWHIECSAM    LG+ FDIHGGG DL
Sbjct: 175 GKHDPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A  W+HNGF+N++  KMSKS GNF TI ++L       +
Sbjct: 235 QFPHHENEIAQSEGATG-KPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  IR  ++ +HYR P++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 EYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKR---LYTALDLVTPAEVQIDWSNPY 343

Query: 353 -----SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILG---------IEV 396
                +A+  D  T  A+  L +LA E   +K+ ++  +  A    LG         ++ 
Sbjct: 344 AARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGLLQAEPQKFLQA 403

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E ++     A      E       K ++ AD IRK+L  +G +L+D
Sbjct: 404 GAEGVDAAAIEAQIAARAE---AKATKNWAEADRIRKELLDQGIVLKD 448


>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
 gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
          Length = 556

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 150/324 (46%), Positives = 202/324 (62%), Gaps = 16/324 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ ++N+L ++   FQ      + MYVCG T YDF+HIG+AR  + FDVLYR L++   E
Sbjct: 32  QLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYE 91

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D T L CL PT +P
Sbjct: 92  --VEYVRNFTDIDDKIIKRANER------GETVTSLSSRFINEFLLDMTELQCLPPTCEP 143

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI  +I LI  I+ +  AY    ++ F   S P Y S S RK D+ + G RV    
Sbjct: 144 RVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFDT 203

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 204 RKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIFP 263

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   E     W+HNGF+N + +KM+KS+ NF TI ++          + 
Sbjct: 264 HHENELAQSRAA-YPESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITAL-------YH 315

Query: 304 APVIRLAMLMTHYREPIDFTVQRL 327
              +R  ++ THYR  ++ + Q L
Sbjct: 316 PLALRFFLMRTHYRSDVNHSDQAL 339


>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 483

 Score =  305 bits (780), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 191/491 (38%), Positives = 253/491 (51%), Gaps = 69/491 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF  + P  + MYVCG T YD+ HIG+AR  +VFD L R LR+   E 
Sbjct: 1   MQIYNTLGRQKEEFIPVRPGKVHMYVCGITAYDYCHIGHARSALVFDALVRHLRHLGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA +E            +       F +D  RL  L    +PR
Sbjct: 60  -VTFVRNFTDVDDKIINRANKE------GRDWQEVAQTYIDAFHEDMDRLGVLRADLEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQ+  L   +I  G AY   + ++ F   S P YG  S R +DE   G RV    
Sbjct: 113 ATEYIPQIQELCAKLIAEGTAYATPSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMSS YL    DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSSPYL--PLDIHGGGQDLVFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS    R E  A  W+HNGF+ +   KMSKS GNF TI ++L        S+ 
Sbjct: 231 HHENEIAQSEAVCRCE-LARYWVHNGFVQVNAEKMSKSLGNFKTIRDILG-------SYL 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----------------ILLSKWPQT------S 341
              +R  +L  HYR PIDFT + + EAE                +  + W +T      S
Sbjct: 283 PETLRFFLLGKHYRSPIDFTAEGMDEAEKAQHRVYSSLMEARKALERASWKKTPLPAELS 342

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQAL------------HKLARESTKNHDLLPIFNASA 389
                +  A  +AL +DLNT  A+  +             K  R +    DLL  F A A
Sbjct: 343 AEWAALPQAFEAALDDDLNTAQALGQIFSQVRIVNRLLEEKNLRAAESTRDLLEDFLARA 402

Query: 390 H-------ILG---IEVCKE-----HLNKNISI-AIEKLVQERLILLKMKKFSSADYIRK 433
                   + G   +E   E        KN+ +  +E L+++R  +   K F+ +D +R+
Sbjct: 403 RDWDAQLGLFGRDPVEFLTELRAMRAARKNLDMDRVEDLLRQRREVRMQKDFTRSDALRR 462

Query: 434 QLESKGFILED 444
           +L   G  + D
Sbjct: 463 ELLDLGVNVRD 473


>gi|332970727|gb|EGK09707.1| cysteine--tRNA ligase [Desmospora sp. 8437]
          Length = 462

 Score =  305 bits (780), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 179/487 (36%), Positives = 254/487 (52%), Gaps = 58/487 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++NT  RK+  F+      + MYVCGPTVY++ HIGNAR  + FDV+ R LRY   +  V
Sbjct: 1   MFNTQTRKLEPFRPQHDRKVAMYVCGPTVYNYIHIGNARVFVFFDVVRRYLRYKGYD--V 58

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYV+N TD+DD++IE A++E      N  +  +  +  + +  D   L        P+AT
Sbjct: 59  TYVQNFTDVDDRLIESAKRE------NTTVKELAERYIRAYFDDMDALGVQRADVHPKAT 112

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HIP+M   I  +I  G+AYE   ++ +      +YG  S + ++E   G RV     K+
Sbjct: 113 EHIPEMQEAILTLIDKGYAYEREGDVYYRALRKEDYGKLSGQSVEELNAGARVEVNEKKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
            P DF LWK++ P E  WESPWGRGRPGWHIECSAMS  YLG   D+H GG+DL FPHHE
Sbjct: 173 TPLDFALWKKAKPGEISWESPWGRGRPGWHIECSAMSRKYLGDTLDVHAGGMDLCFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS      +     W+HNG++N+   KMSKS GN + ++EL E        +    
Sbjct: 233 NEIAQSEAWTE-KPFVRYWLHNGYINMGNEKMSKSLGNVVRVHELRE-------QYAPRA 284

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVL----- 352
           +R  +L  HYR PI F+ + + + E  L ++    T+         +G  +P V      
Sbjct: 285 LRYFLLSAHYRNPISFSHEAIRQIEGSLERFDTAVTNLHHRMGAAQEGEAEPEVRERLAS 344

Query: 353 ------SALYNDLNTVSAIQALH---KLARESTKNHDLLP----------IFNASAHILG 393
                 +A+ +DLNT + I  LH   K A E T    ++P          I      ILG
Sbjct: 345 LTGEFEAAMDDDLNTANGISVLHEAVKFANE-TVARSVVPKGSLAMLLDWIHRFGGEILG 403

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +    E    +++  IE L++ER      + F  AD IR +L ++G ILED   P     
Sbjct: 404 LVTAGE--EDSLAGEIEALIEERQQARAARDFKRADAIRDRLAAQGIILED--TPQG--- 456

Query: 454 MTRWKQK 460
             RW++K
Sbjct: 457 -VRWRRK 462


>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
 gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
          Length = 522

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 171/412 (41%), Positives = 227/412 (55%), Gaps = 62/412 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRY 59
           + + ++NT+ R+   F   D +   + MYVCG TVYD++HIG+AR  + FDVLYR L R 
Sbjct: 8   QTLMLHNTMARRKEPFSPRDSTGKKVNMYVCGVTVYDYSHIGHARVYVAFDVLYRQLTRM 67

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
            Y    VTY RN TD+DDKII+RA +        +    +  +    F +D   L CL P
Sbjct: 68  GYD---VTYCRNFTDVDDKIIKRANEN------GEECDALVDRFIAAFHEDIDALGCLRP 118

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T +PRAT+HI  ++ + + +I  G+AY A+ ++ F   ++P YGS S RK ++ + G RV
Sbjct: 119 TIEPRATDHIKDIVTMCERLIEKGYAYPADGDVYFSVDALPEYGSLSGRKQEDNRAGERV 178

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LGK  DIHGGG D
Sbjct: 179 AVDDRKKNPADFALWKAAKPGEPTWDSPWGAGRPGWHIECSAMIDSILGKSIDIHGGGQD 238

Query: 240 LIFPHHENEIAQS-----CCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           L+FPHHENE+AQS     CCA    +  E     W+HNGF+ ++  KMSKS GNF TI E
Sbjct: 239 LVFPHHENELAQSTASCRCCATDGDEPEEPFVRYWVHNGFVKVDSEKMSKSLGNFFTIRE 298

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------------- 334
           + E        +    +R  +L THYR PI++T + L EA   L                
Sbjct: 299 VTE-------KYHPFALRWMLLGTHYRAPINYTQRALEEASDRLYYLYQTLVDSRVALTE 351

Query: 335 -------------SKWPQTSTSKGI-----IDPAVLSALYNDLNTVSAIQAL 368
                         K P    ++GI        AV SAL +DLNT  A+ +L
Sbjct: 352 AEASATDAEVKGKPKPPTGVAAEGIELAVETKAAVASALTDDLNTPLAMASL 403


>gi|53719852|ref|YP_108838.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|53723757|ref|YP_103282.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642953|ref|ZP_00441703.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|76809388|ref|YP_334067.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121599658|ref|YP_993471.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385862|ref|YP_001029097.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126441734|ref|YP_001059571.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126449503|ref|YP_001080979.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452065|ref|YP_001066849.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134277835|ref|ZP_01764550.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167001797|ref|ZP_02267589.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167720284|ref|ZP_02403520.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167739281|ref|ZP_02412055.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167816497|ref|ZP_02448177.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167830172|ref|ZP_02461643.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167846407|ref|ZP_02471915.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894988|ref|ZP_02482390.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167903372|ref|ZP_02490577.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167916840|ref|ZP_02503931.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167919625|ref|ZP_02506716.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217420917|ref|ZP_03452422.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226198973|ref|ZP_03794536.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237812906|ref|YP_002897357.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|242315930|ref|ZP_04814946.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254178125|ref|ZP_04884780.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254184417|ref|ZP_04891007.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254191450|ref|ZP_04897954.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197349|ref|ZP_04903771.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254200234|ref|ZP_04906600.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254209314|ref|ZP_04915660.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254258938|ref|ZP_04949992.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297083|ref|ZP_04964536.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358017|ref|ZP_04974290.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|61216158|sp|Q62J37|SYC_BURMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216161|sp|Q63SS8|SYC_BURPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894887|sp|Q3JQT6|SYC_BURP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200132|sp|A3ML43|SYC_BURM7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200133|sp|A2SAX8|SYC_BURM9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200134|sp|A1V5G8|SYC_BURMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200135|sp|A3NWX8|SYC_BURP0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200136|sp|A3NB50|SYC_BURP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52210266|emb|CAH36245.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52427180|gb|AAU47773.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76578841|gb|ABA48316.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121228468|gb|ABM50986.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293882|gb|ABN03151.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126221227|gb|ABN84733.1| cysteine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126225707|gb|ABN89247.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242373|gb|ABO05466.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134251485|gb|EBA51564.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749830|gb|EDK56904.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750087|gb|EDK57158.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027144|gb|EDK85165.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157807476|gb|EDO84646.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157939122|gb|EDO94792.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160699164|gb|EDP89134.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169654090|gb|EDS86783.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184214948|gb|EDU11991.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217396329|gb|EEC36346.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225929073|gb|EEH25097.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237504389|gb|ACQ96707.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238524180|gb|EEP87614.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242139169|gb|EES25571.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243062482|gb|EES44668.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254217627|gb|EET07011.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 465

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 183/472 (38%), Positives = 255/472 (54%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R   +F    P  +RMYVCG TVYD+ HIG+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRAR-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T + T     D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIQSLTRRFTDAMNADFDALGVERPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATEFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGRLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P EP    WES +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPQEPAGASWESKYGAGRPGWHIECSAMGCTLLGAHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++   T+      D   L      
Sbjct: 288 --KFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRL-YTALKDATPDAQPLDWSEAH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC------KEHL 401
                +A+ +D NT  A+  L +LA E  +  +  P       +L   +       +E L
Sbjct: 345 AQRFAAAMNDDFNTAVAVAVLFELATEVNRTRE--PALARQLRLLAGLLGLLGREPREFL 402

Query: 402 NKNISIA---------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 A         IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QHAAGAARTGALEPHEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALED 454


>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 463

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 185/484 (38%), Positives = 260/484 (53%), Gaps = 50/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        +    +T +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRAAEN------GETFMALTDRMIAEMHADFASLNILPPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT HI ++I ++Q +I   HAY A+N +++F   S P+YG  SR+ +D+ + G RV  E 
Sbjct: 114 ATQHIHEIIDIVQKLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+F
Sbjct: 174 NVKRNPMDFVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 PHHENEIAQSSCA-HDGPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVL-------KYY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLS 353
            A  +R  ++  HYR  ++++ + L  A   + + +     +     PA          +
Sbjct: 286 DAESVRYFLMSGHYRSQLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAFVTRFRA 345

Query: 354 ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILG-IEVCKEHLNKN 404
           A+ +D NT  A   L  +AR+    K  DL      +A       +LG +E   E   K+
Sbjct: 346 AMDDDFNTPEAYSVLFDMARDINRLKTEDLSAANGLAAELRQLAGVLGLLEQDPEQFLKS 405

Query: 405 ISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            + A        IE L+++R      K +  AD  R +L   G +LED      G   T 
Sbjct: 406 GAQADNDDEVAEIEALIKQRNDARASKDWGMADKARDRLNEMGIVLED------GAAGTT 459

Query: 457 WKQK 460
           W++K
Sbjct: 460 WRRK 463


>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 461

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 183/484 (37%), Positives = 263/484 (54%), Gaps = 52/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF++WK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVVWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI +LL         + 
Sbjct: 234 HHENEIAQSCCAHGTDYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDLLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA--------VL 352
           A  +R  ++  HYR  ++++   L +A   L +    ++ +G+     PA          
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERL--YTSLRGLDLTAAPAGGEEYVTRFS 343

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE-------VC 397
           +A+ +D NT  A   L ++ARE          K   L  +    A I+GI        + 
Sbjct: 344 TAMNDDFNTPEAYSVLFEMAREINRIKTESIEKASGLGALMRELADIIGILHQDPEAFLQ 403

Query: 398 KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +    +  +A IE L++ R      K +++AD  R +L   G +LED      G   T 
Sbjct: 404 GDAAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTT 457

Query: 457 WKQK 460
           W++K
Sbjct: 458 WRRK 461


>gi|332365783|gb|EGJ43540.1| cysteine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 447

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 175/468 (37%), Positives = 250/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  I FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEGGKVKMYVCGPTVYNYIHVGNARSTIAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DD+II RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDRIINRAKEEGIT-PKE-----VADKYIAAFREDVTALGVKLATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +A   L     T      G  D A L       
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I    +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVAFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|313887550|ref|ZP_07821233.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846428|gb|EFR33806.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 465

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 189/489 (38%), Positives = 258/489 (52%), Gaps = 59/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  +F  I    + +Y CGPTVY+F H+GNARP++VFD L R   Y  G K
Sbjct: 1   MKLYNTLTRKKEDFVPIKEGEVGIYNCGPTVYNFIHVGNARPLVVFDTLRRYFDYK-GMK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDK+I +A  E   +      S I  +  ++F KD   L      T  P
Sbjct: 60  -VKFVVNFTDIDDKMINKANDEGVKV------SDIAERYIKEFKKDAGGLHLYDYETINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI ++I  IQ +I  G AY +N ++ FD S   +YG  S++ +++   G RV    
Sbjct: 113 RATEHIDEIIDFIQTLIDKGAAYVSNGDVYFDISHAKDYGKLSKKNLEDLISGHRVDVND 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF LWK     EP W++PWG GRPGWHIECS M+   +G   DIH GG DL FP
Sbjct: 173 NKKNPQDFALWKNKKEGEPYWQAPWGEGRPGWHIECSVMAKTIIGDNIDIHTGGEDLQFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   + +   AN W+HNG + ++  KMSKS GNF T+ E+ E        + 
Sbjct: 233 HHENEIAQSETCNGV-PFANYWLHNGMITVDNEKMSKSKGNFFTVREISE-------EFD 284

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKW-PQTSTSKGIIDPAVL 352
             V+R  +L T YR PI+F          + +RL  A+  L     +TS  K   +   L
Sbjct: 285 LEVLRFFLLTTQYRSPINFSREVMEQTKNSSKRLYNAKYKLEDAIEKTSVEKMTEEEENL 344

Query: 353 ------------SALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                        A+ +DLNT  AI A+  L ++   N D           L +      
Sbjct: 345 LKGYDKHIEKFEKAMEDDLNTADAITAIFDLVKDINLNLDENSSKEVLEKSLELLKKLTK 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI    E   + IS  IE+L++ER    K K F+ AD IR +L++ G  +ED ++   
Sbjct: 405 VLGI---MEEEREEISGDIEELIKERNEARKNKDFTRADEIRDELKNMGIEIEDTRSG-- 459

Query: 451 GQRMTRWKQ 459
               T WK+
Sbjct: 460 ----TTWKR 464


>gi|332076428|gb|EGI86891.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 447

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 181/468 (38%), Positives = 252/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + ++A+  ++ N+D  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLDAE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 IEDLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 481

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 181/487 (37%), Positives = 260/487 (53%), Gaps = 65/487 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +K  EF+ +D   +++Y CGPTVYD+ HIGNAR  I+ D+L R L Y     
Sbjct: 3   LQIYNTLTQKKEEFEPLDQDEVKLYSCGPTVYDYFHIGNARAFILPDILKRYLEY--KGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+RA +E   I        +  +    + +DT RL        P+
Sbjct: 61  NVLHVTNFTDVDDKMIKRANEEEIEI------EELADRFITAYFEDTERLNIKQADVYPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I L++ +   G+AYE + ++ F      +YG  S ++++E   G+RV     
Sbjct: 115 ATEHISDIIELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVNDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK+S   EP WESPWG GRPGWHIECSAMS  YLG+ FD H GG+DL+FPH
Sbjct: 175 KEDPLDFVLWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A    +  N W+HNG++N++G KMSKS GNF T  ++L       + + A
Sbjct: 235 HENEIAQN-EAGVGSQVVNYWLHNGYINVDGEKMSKSLGNFFTTRDIL-------QDYSA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIID--------------- 348
            V+R  ++  HYR PI+F+   L  A   L +   T    K ++D               
Sbjct: 287 EVLRFFLISKHYRSPINFSDAELDNAAKSLQRLQNTVNKLKDLLDRDRADLKPGNKEELQ 346

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLAREST-------------------KNH 379
                          A+ +DLNT  AI ALH+LA+E                     K +
Sbjct: 347 ELEKKIKAKREKFEEAMDDDLNTALAIGALHELAKELNIVVNDADFELNQANIIVLEKAY 406

Query: 380 DLLPIFNASAHILGIEV-CKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           D       S  +LGI +  ++ ++ N+ S  I  L++ R    + + +  AD IR +L  
Sbjct: 407 DTFK--ELSQQVLGINLETEDDISDNLTSDLIGLLLEVRNKARQNQDWELADQIRDELSE 464

Query: 438 KGFILED 444
            G ILED
Sbjct: 465 LGIILED 471


>gi|308234253|ref|ZP_07664990.1| cysteinyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943535|ref|ZP_08241000.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491504|gb|EGF23278.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 490

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 184/497 (37%), Positives = 263/497 (52%), Gaps = 73/497 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYN+   K  EF  ++P+ +RMYVCGPTVYD  HIGNAR  + FD++ R L+Y      V
Sbjct: 3   IYNSKTHKKEEFIPLEPNRVRMYVCGPTVYDQIHIGNARTFLSFDIIRRYLQYK--GFAV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            + +N+TD+DDKII RA ++  S         +    +  F++   R   L P  +PRAT
Sbjct: 61  VFAQNLTDVDDKIINRANEQGISA------DELAKTYSCAFIEQMHRFGILDPDIRPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             I  M  +IQ +I  GHAY A+N ++ F   S  NYG  S R++D+ + G R+     K
Sbjct: 115 AEIEHMQVMIQILIDKGHAYVADNGDVYFSVRSDHNYGVVSGRQLDDMRAGERIEVNDAK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK + P EP W+SPWG+GRPGWH EC AM   YLG   DIHGGG DL+FPHH
Sbjct: 175 RDPFDFVLWKAAKPSEPSWDSPWGKGRPGWHTECCAMIHRYLGTPIDIHGGGQDLMFPHH 234

Query: 246 ENEIAQSCCA-DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           ENE AQ+ CA D+    AN W+H G L ++G KMSKS GNF T+ E+L+       ++PA
Sbjct: 235 ENENAQASCAWDK--PLANYWMHAGMLRVDGEKMSKSLGNFYTLKEVLD-------AYPA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WP--QTSTSKGI------- 346
             +RL ML THYR P+DF+ +RL  A   L K         W   Q+  S  +       
Sbjct: 286 DAVRLLMLQTHYRAPLDFSFERLNGARGTLQKLIGCVENLRWSAEQSGESGALGKAEQAL 345

Query: 347 ---IDPAVL---SALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNAS----- 388
              +D A +   + + +D N   A+ A+  L   + K  +       + P+   +     
Sbjct: 346 GNAVDHAQIEFETQMDDDFNAAGALAAIFNLMAHANKYLEEAGAHPCVAPMLRCADMLCE 405

Query: 389 -AHILGIEVCKE--HLNKNISIAIEKLVQE---------RLILLKM------KKFSSADY 430
              +LGI +  +   L   I    +K+ Q+         RL+++        K ++ AD 
Sbjct: 406 LCSVLGITLAAKTSELPAEIIDLAQKVTQQSASSCEEAARLLIMARAEARSNKDWTRADA 465

Query: 431 IRKQLESKGFILEDYKN 447
           IR  +   G ++ED  N
Sbjct: 466 IRDGIAELGLMVEDTAN 482


>gi|160943774|ref|ZP_02091005.1| hypothetical protein FAEPRAM212_01272 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444948|gb|EDP21951.1| hypothetical protein FAEPRAM212_01272 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104011|emb|CBL01555.1| cysteinyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 465

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 188/474 (39%), Positives = 267/474 (56%), Gaps = 53/474 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y  G K
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYR-GNK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E  S+        +  +   +++KD   L C  PT QPR
Sbjct: 60  -VIYVSNITDIDDKLIKKGQEEGTSM------KEVAQRFEAEYLKDAAGLNCEKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
           AT HIPQ++ +++++I  GHAY A N ++ F   S P YG  S   +D+ + G R     
Sbjct: 113 ATEHIPQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPGYGKLSHLNLDDLESGNRELRSR 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A  W+HNGF+N++ +KMSKS  NF T+ ++     +  
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDVANLYGY-- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSKWPQTSTSKG 345
                  IR  ML   YR P+++TV  +                 +  LSK     T + 
Sbjct: 290 -----EPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSK-TDFGTDET 343

Query: 346 IIDPAV------LSALYNDLNTVSAIQALHKLARE-------STK--NHDLLPIFNASAH 390
           + + A        +A+ +DLNT  A+ A+  L +E       S+K         F+    
Sbjct: 344 LKEKAAEARTKFCTAMDDDLNTPDALAAVFDLVKEINTLSAASSKAALETAAAAFDEITG 403

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D
Sbjct: 404 VLGLLYNRK--KDEVPAEVTELVEKRAAAKKAKDWATADAIRAQLTELGWAVKD 455


>gi|303244169|ref|ZP_07330507.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485554|gb|EFL48480.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 476

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 187/481 (38%), Positives = 260/481 (54%), Gaps = 56/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K  EF +ID   ++MYVCGPTVYD+AH+G+ R  +VFD + R L +     
Sbjct: 1   MKIYNTLTKKKEEFNSIDEHEVKMYVCGPTVYDYAHLGHGRTYVVFDTIRRYLEH--KNY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA +E  +IP  +    +  K  + F++D  +L        PR
Sbjct: 59  IVKLVINFTDIDDKIIKRANEE--NIPPTE----LADKFIKSFLEDMEKLNIKPAYVYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HI  +I  I+ +I  G+AY A++ I FD     +YG  S   +DE + G R+     
Sbjct: 113 VSEHIKDIIRFIEVLIKKGYAYVADDGIYFDVRKFKDYGKLSNINLDEIRTGYRIETNLT 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP W+SPWG GRP WHIECSAM   YLG+ FDIHGGG DLIFPH
Sbjct: 173 KRNPEDFALWKFAKPNEPKWDSPWGEGRPAWHIECSAMGIKYLGEQFDIHGGGNDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     WIH GF+ ++  KMSKS GNF+ + +LL+   F       
Sbjct: 233 HENEIAQSEVYTDKKPWVKYWIHTGFVMMDKEKMSKSLGNFVELKDLLDKYDF------- 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------ST 342
            VIRL +L  HYR P+D++ + L +A+I L K   T                       T
Sbjct: 286 EVIRLFLLQRHYRSPLDYSEEGLLDAKISLEKLYNTLKNIDAICRNSHVKHKLNEIDIKT 345

Query: 343 SKGIIDPAV--LSALYNDLNTVSAIQ-------ALHKLARESTK-NHDLLPIFNASAHIL 392
            + I +  +   +A+ +D NT  A++        ++K   ES   N  LL + N    ++
Sbjct: 346 YETIKNAWINFYNAMDDDFNTPEALKYVFEVSSVINKYMNESNNPNKSLLIMTNEFFKMI 405

Query: 393 G--------IEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           G        I   K + +KN+    I+ L+  R  L + K +  AD IR +L++ G  LE
Sbjct: 406 GEIFGIFHNIINNKNNEDKNMEGHLIDILINIRAKLKEEKNYKLADEIRSELKNIGIQLE 465

Query: 444 D 444
           D
Sbjct: 466 D 466


>gi|187924487|ref|YP_001896129.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187715681|gb|ACD16905.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 465

 Score =  304 bits (779), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 178/470 (37%), Positives = 255/470 (54%), Gaps = 45/470 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQEGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIRRA------VENGETIKALTDRFIDALHEDADALGIQRPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A++ ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEQLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  +   HYR P++++   + +A   L++   T+      D A L      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARL-YTALKDVTPDAAELDWNEAH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIE------- 395
                +A+ +D NT  A+  L +LA E  +  D      L    A   +LG E       
Sbjct: 345 AQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVIGLLGREPRAYLQQ 404

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        AIE  +  R+   + K +++AD IR +L   G  LED
Sbjct: 405 AAGAAAEGALEPAAIEAKIAARVAAKQAKDYAAADRIRAELLEAGVALED 454


>gi|157150688|ref|YP_001449668.1| cysteinyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075482|gb|ABV10165.1| cysteinyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 447

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 174/468 (37%), Positives = 255/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  +++++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTCQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID------PAV 351
               V+R      HYR+PI+FT + + +A    + L + + Q  T +   D         
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQDFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKTAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|161830739|ref|YP_001597327.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|187629808|sp|A9N924|SYC_COXBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|161762606|gb|ABX78248.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 458

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 178/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L ++   F+ I+   +++YVCG TVYD+ HIG+ R  I+FD++ R LR    E 
Sbjct: 1   MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RA +   S       + +  +  Q   +D   L  L+P  +PR
Sbjct: 60  -VTFVRNITDIDDKIIKRAGENKESP------AALAERFIQILHEDEKALRVLSPDQEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P++I LIQ ++ + +AY   N ++ FD     +YG  S R +D+ + G RV    
Sbjct: 113 ATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGGLDL FP
Sbjct: 173 SKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +  +    +W+H G L +   KMSKS GN I+I E L+          
Sbjct: 233 HHENEIAQSEAGEE-KPFVKLWMHAGLLEINKEKMSKSLGNIISIREALKESD------- 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS--------AL 355
             V+R  +L  HYR P+ ++ + L    + L ++        +++    S        A+
Sbjct: 285 VEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAM 344

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---------AHILGI-----EVCKEHL 401
            +D NT  A   L ++ RE  +  D   I  A+          +I G+     E   +  
Sbjct: 345 DDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA 404

Query: 402 NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K   +  I+KL+ +R      K + +AD IR QL   G  +ED  +       T W+Q+
Sbjct: 405 KKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDG------TSWRQE 458


>gi|15900500|ref|NP_345104.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657664|ref|ZP_01408394.1| hypothetical protein SpneT_02001141 [Streptococcus pneumoniae
           TIGR4]
 gi|149005703|ref|ZP_01829442.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149021553|ref|ZP_01835608.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168490519|ref|ZP_02714662.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168576506|ref|ZP_02722380.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225858428|ref|YP_002739938.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225860592|ref|YP_002742101.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230928|ref|ZP_06964609.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254670|ref|ZP_06978256.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502386|ref|YP_003724326.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|307126794|ref|YP_003878825.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|21264019|sp|Q97S25|SYC_STRPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|14972066|gb|AAK74744.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147762643|gb|EDK69603.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147930249|gb|EDK81234.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183575011|gb|EDT95539.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183577730|gb|EDT98258.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225720814|gb|ACO16668.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225728330|gb|ACO24181.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237981|gb|ADI69112.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|306483856|gb|ADM90725.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|327390330|gb|EGE88671.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332077024|gb|EGI87486.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 447

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 183/469 (39%), Positives = 255/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++A+  ++ N+D   +  A A    I GI   +E L+     
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|301793788|emb|CBW36177.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|332204613|gb|EGJ18678.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 447

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 182/469 (38%), Positives = 253/469 (53%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++ +I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEGLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++A+  ++ N+D   +  A A    I GI   +E L+     
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|304385485|ref|ZP_07367830.1| cysteine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328692|gb|EFL95913.1| cysteine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 472

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 181/492 (36%), Positives = 259/492 (52%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT+ R    F+ +    + MYVCGPTVY++ HIGNAR +I FD + R L Y   + 
Sbjct: 2   IKLYNTMTRSKEVFKPLVDQQVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A+ E+ ++P       +  +    F +D   L     T  PR
Sbjct: 61  -VRFVSNFTDVDDKMIKAAQAENITVPE------LAERYIAAFKEDVQALNVEPATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I  +I  + ++I   +AY     + +      NYG+ S + IDE + G        
Sbjct: 114 ATENITDIIAFVADLIEKDYAYVVEGNVYYRARRFKNYGALSHQNIDELEQGASQHINDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W++PWG+GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETMQKEDPIDFALWKAAKPGEIAWKAPWGKGRPGWHIECSVMSTKYLGDTFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS     ++  A  W+HNGF+ +  +  KMSKS GNF+T+++L+      
Sbjct: 234 QFPHHENEIAQSEARTGVQ-FARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLI------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA 350
            +     V+R  M  T YR+PI +T   L +A+  L K             T+ G  DPA
Sbjct: 287 -KQVNPQVLRFLMSTTQYRKPIQYTETSLQDAKNNLEKLQNAYVNLNYRLQTANGAADPA 345

Query: 351 V-----------LSALYNDLNTVSAIQALHKLAR-------ESTKNHD----LLPIFNAS 388
           V           ++A+ +D N  + I  +++ AR       ++T NH+    L   F   
Sbjct: 346 VDQQAAALQADFVAAMDDDFNAQNGITVVYEFARLINVYSEQATVNHEQIARLAKQFAEM 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A I GIE+            IE LV++R      + F ++D +R QL+  G ILED   P
Sbjct: 406 AAIFGIELATA-TEAPADEKIEALVKQRDAARAARDFETSDRLRDQLKEMGIILED--TP 462

Query: 449 DNGQRMTRWKQK 460
                 TRW++K
Sbjct: 463 QG----TRWRKK 470


>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|187629838|sp|A5D5M0|SYC_PELTS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 484

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 182/505 (36%), Positives = 260/505 (51%), Gaps = 71/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   FQ  +P  + MYVCGPT Y++ H+GNARP++ FD + R L +   E 
Sbjct: 1   MEIYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII RA++E       D    +  +   ++ KD   L        P 
Sbjct: 60  -VLFVQNFTDVDDKIINRAQEE------GDDPLALARRYIGEYFKDADALNVRRADRHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HIP +I ++  ++  G AY  +  + F+      YG  S R +++ + G RV     
Sbjct: 113 VSEHIPDIIKMVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS  YLG  FDIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+ +   KMSKS GNF  + ++L         +P 
Sbjct: 233 HENEIAQSEAATG-QPFVRYWMHNGFITVNEEKMSKSLGNFFLVRDILA-------KFPP 284

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI-------- 346
            ++R  +L THYR P+DF           ++R+  +  LL +  +   S+G+        
Sbjct: 285 ELVRFFLLSTHYRSPLDFDGEKMAAAGRGLERIKTSLRLLYEALERPVSEGVQAVCSRDP 344

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARE----------STKNHD------LLPIFNA 387
              I  +  +A+ +D NT  AI A+  LARE          +    D       L +FN 
Sbjct: 345 FDEIRASFEAAMDDDFNTALAIGAVFDLAREANTAVQRTGPAVSGQDRQILQYALDLFNE 404

Query: 388 SAHILGI--------EVCKEHLNKNISIAIEKLV----QERLILLKMKKFSSADYIRKQL 435
              +LGI         +  +    + S  +E L+    + R    K K +S+AD IR  L
Sbjct: 405 FNEVLGIFKVDGASGRLLIDGAAGDDSGLVEGLINLILEVRQEARKRKDWSTADRIRDGL 464

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
           +  G +LED   P       RWK++
Sbjct: 465 KELGILLED--TPQG----VRWKKQ 483


>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710839|sp|B6EH43|SYC_ALISL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 462

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 180/485 (37%), Positives = 269/485 (55%), Gaps = 53/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +       N++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------NESCEALTERLIAEMHADFDALKMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--E 181
           AT +I +++ L++ +I  G AY A+N +++F+      YG  SR+ +++ + G+RV   E
Sbjct: 114 ATEYITEIVELVERLIERGFAYVASNGDVMFEVKKFDEYGRLSRQDLEQLQAGSRVTLEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+
Sbjct: 174 TSVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLM 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA    K  N W+H+G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDA-KYVNTWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA-------- 350
           + +  +R  ++  HYR  ++++ + L +A   L +    ++ +G+   + PA        
Sbjct: 286 YDSETVRYFLMSGHYRSQLNYSEENLNQARSSLERL--YTSLRGLDLTVTPAGGETFVTR 343

Query: 351 VLSALYNDLNTVSAIQALHKLARE----STKN----HDLLPIFNASAHILGIE------- 395
             +A+ +D NT  A   L ++ARE     T+N      L  +    A +LG+        
Sbjct: 344 FSTAMNDDFNTPEAYSVLFEMAREVNRLKTENIEAASKLGALMRELAEVLGLLSQEPEAF 403

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +  +  + N    IE L++ R      K +S+AD  R  + +   +LED      G   T
Sbjct: 404 LQGDSGSDNEVAEIEALIKARNDARAAKDWSAADAARDAITALNIVLED------GPEGT 457

Query: 456 RWKQK 460
            W++K
Sbjct: 458 TWRRK 462


>gi|255659332|ref|ZP_05404741.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848414|gb|EEX68421.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 477

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 178/498 (35%), Positives = 259/498 (52%), Gaps = 66/498 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ R+  EF+ + P  + +Y CG T Y+  HIGNARP + +DV+ R    Y+ +K
Sbjct: 2   LKVYNTMTRRKEEFKPLKPGEVSIYCCGVTPYNHPHIGNARPFVTWDVIRR----YFAKK 57

Query: 65  C--VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y++N TD+DDKII  A +E   +   D    I+ +  + + +    L        
Sbjct: 58  GYKVHYIQNFTDVDDKIINAANKE--GVTWKD----ISDRYIKAYFEAMDALNVRHADVY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR +  +P++I ++Q +I  G+AY  +N ++ +      +YG  S R +D+ + G R+  
Sbjct: 112 PRVSETMPEIIAMVQKLIDKGYAYVIDNGDVYYSVEKFSHYGKLSGRSLDDMQAGARIEV 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K +P DF LWK + P EP W+SPWG+GRPGWHIECS MS  YLGK FD HGGG DLI
Sbjct: 172 NTAKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSLKYLGKKFDFHGGGSDLI 231

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQS  C       A  W+HNGF+ +   KMSKS  NF T+ ++L       +
Sbjct: 232 FPHHENEIAQSQACIGDDHSFAQYWLHNGFITIHNEKMSKSKNNFFTVKDIL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDP---- 349
            +P  VIR  +L THYR P+DF+ +RL EA+  L +   T       S  +G  D     
Sbjct: 285 EYPGEVIRFFILQTHYRSPLDFSDERLKEAQTSLGRLQNTKAYVDELSAKQGESDTAAEL 344

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARE----------STKNHD------LLPI 384
                    A   A+ +D NT  AI  +  L+++           TK  D      +  +
Sbjct: 345 AAKAEELRKAFYEAMDDDFNTALAISQMFALSKDINIYYQEVVNGTKAFDAADFKKVAAV 404

Query: 385 FNASAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +   A I+GI   +E    +  +    +E ++  R    K K ++ AD IR  L+  G +
Sbjct: 405 YAEMAEIIGIFEQQEKAAADDGLTDKLMEIIITLRQDARKEKNWAVADKIRDALKDAGVV 464

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           LED   P       RWK+
Sbjct: 465 LED--TPSG----VRWKK 476


>gi|322390880|ref|ZP_08064388.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142393|gb|EFX37863.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 447

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 178/466 (38%), Positives = 250/466 (53%), Gaps = 35/466 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMEDIIRFVADLIEKGYAYESQGDVYFRVEKSNNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKTID---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +DPA L      
Sbjct: 288 ---GQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFAGEVDPADLQNFVDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
             +A+  D+N  + I  + +LA+     H    + +A A +L        + + +   IE
Sbjct: 345 FIAAMDEDINAANGITVVFELAKWINSGHYNQDVKDALAKML-EVFGVVFVEEVLDADIE 403

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            L+ ER      K F+ AD IR +L ++G  L D K    G R TR
Sbjct: 404 ALIAERQEARAKKDFARADAIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|15902563|ref|NP_358113.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517189|ref|YP_816017.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|30316153|sp|Q8DQS8|SYC_STRR6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15458093|gb|AAK99323.1| Cysteinyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116077765|gb|ABJ55485.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 447

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/469 (39%), Positives = 254/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIERGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++A+  ++ N+D   +  A A    I GI   +E L+     
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|315649724|ref|ZP_07902808.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315274912|gb|EFU38288.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 468

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 179/492 (36%), Positives = 258/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F A +   +++YVCGPTVYD+ HIGNARPMI FDV+    R Y+  +
Sbjct: 3   LQIYNTLTRMKETFVAQESGKVKIYVCGPTVYDYIHIGNARPMIFFDVV----RAYFENQ 58

Query: 65  C--VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V+YV N TD+DDK+I +A Q   ++P       +  K  Q + +D   L     T  
Sbjct: 59  GNDVSYVVNFTDVDDKMIRKAEQTGTTVPE------VADKFIQAYYEDLDGLGIPRATLN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T+++  +I  IQ ++    AYE   ++ + T    +YG  S++ +DE + G R+   
Sbjct: 113 PRVTDNMENIIEFIQELVDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL F
Sbjct: 173 KRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE E+AQS      +  AN W+HNG++ +   KMSKS GN + + EL E        +
Sbjct: 233 PHHECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID------ 348
               +R  ML THYR P++++ + + +A+  + +            ST+ G  D      
Sbjct: 285 TKEAVRYFMLSTHYRNPLNYSDEVMDQAQNSVERLANAAANIEHRLSTAIGSKDDEVSQE 344

Query: 349 -----PAVLSALY----NDLNTVSAIQALHKLARESTK-----------NHDLLPIFNAS 388
                 AVL   +    +D NT  AI A+ + A E+ +            H++L  FN  
Sbjct: 345 VAGKISAVLGEFHQKMQDDFNTPDAITAMFQWASEANQLLKEASIPAADLHEVLRAFNEM 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +L   +        +   IE L+ ER+   K K ++ AD IR +L  +G +LE     
Sbjct: 405 NGVL--RIVNTGTGDLLDEEIEALIAERIEARKNKNWARADEIRDKLADEGIVLE----- 457

Query: 449 DNGQRMTRWKQK 460
           D  Q M RW++K
Sbjct: 458 DTAQGM-RWRRK 468


>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081502|sp|Q1LTX2|SYC_BAUCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 462

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 182/466 (39%), Positives = 263/466 (56%), Gaps = 42/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL  K   F+ I    + +YVCG T YD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LAIFNTLTNKKEIFKPIHIGKVALYVCGVTAYDLCHIGHVRTFVTFDVVIRYLRYCGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDI+DKII +A          ++   +T +   +   D   L  L P  +PR
Sbjct: 61  -VNYIRNITDIEDKIIRKAANN------GESCQQLTDRMIAEMHHDLDLLNILRPDKEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L + +I   HAY A+N +++F   S  NYG  S + +++ ++G RV    
Sbjct: 114 ATQHIKEIIQLTRQLIDKEHAYIASNGDVMFAIESANNYGILSSQNLNQLQIGQRVKITT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAMS  YLGK FDIHGGG DLIFP
Sbjct: 174 VKRNPMDFVLWKMSKHGEPTWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS C +      N W+H+G + +   KMSKS  NF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCMEN-NPYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL-SKWPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++ +HYR+P++++ + L  A   L S +     +K  + P+         + A
Sbjct: 286 AETVRYFLISSHYRKPLNYSEKSLQLARTALKSLYIALRNTKKEVIPSGGEYFIEQFMMA 345

Query: 355 LYNDLNTVSA----IQALHKLARESTKN----HDLLPIFNASAHILGI-----EVC--KE 399
           + ND NT +A     Q  H++ R  TKN      +       A+ILG+     EV   K+
Sbjct: 346 MNNDFNTPAAHAVLFQLAHEVNRLKTKNIKSAQGMAATLRYLANILGLLEQDPEVFLQKQ 405

Query: 400 HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  +++IA IE+LV++R  + K  ++  AD +R++L + G +LED
Sbjct: 406 KIVTDLNIALIEELVKQRNNIRKKHQWVQADKVREKLAAMGIVLED 451


>gi|149376716|ref|ZP_01894474.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149358955|gb|EDM47421.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 436

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 170/451 (37%), Positives = 248/451 (54%), Gaps = 41/451 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD+ H+G+AR ++ FDV+ R LR+   +  V YVRNITDIDDKI+ RA +  
Sbjct: 1   MYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGYD--VHYVRNITDIDDKILRRADEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 +  S +T +  +   +D  +L  L+PT +P AT++I  ++ +I  ++  GHAY 
Sbjct: 58  -----GEVYSDLTQRMIKAMHEDEAKLGVLSPTEEPCATDYINDIVAMIHKLVSGGHAYA 112

Query: 148 ANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+N ++ F   S  +YG  S++K+++   G RV  +  K++PADF+LWK +   E  W S
Sbjct: 113 ADNGDVYFSVESYSDYGKLSKKKLEDLVAGARVDVQEAKRSPADFVLWKAAKEGEVSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAMS+  LG+ FDIHGGG DL+FPHHENEIAQS CA+      N W+
Sbjct: 173 PWGDGRPGWHIECSAMSNRCLGETFDIHGGGPDLLFPHHENEIAQSECANG-HTFVNTWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G + +   KMSKS GNF TI E+ E        +   V+R  ++ +HYR  +D++   
Sbjct: 232 HAGAIRVNKEKMSKSLGNFFTIREIFE-------KYAPEVVRYFLVSSHYRSQVDYSEDN 284

Query: 327 LTEAEILLSKW--------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE---- 374
           L EA   L++         P  + ++   D     A+ +D NT  A   LH +A E    
Sbjct: 285 LAEAGRTLTRLYHALRGLVPAKNVAETEHDQRFAEAMDDDFNTAGATAVLHAVANEINLH 344

Query: 375 -----STKNHDLLPIFNASAHILGI------EVCKEHLNKNISIA-IEKLVQERLILLKM 422
                  K ++   +      +LG+         +      +S   I  ++Q R    K 
Sbjct: 345 RREGRDEKANEQAAVLVRLGGVLGLLQQDPEAFFQADTGGELSADDIAAMIQARADARKQ 404

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           K F+ AD IR +L  KG IL+D +   + +R
Sbjct: 405 KDFAEADRIRDELADKGVILDDSREGTSWRR 435


>gi|307131980|ref|YP_003883996.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306529509|gb|ADM99439.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 461

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 185/482 (38%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        + I+ +T +   +   D   L    P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIKRATEN------GETITQLTDRMIGEMHTDFDALNIQRPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I ++I L++ +I   HAY ANN +++F   + P YG+ SR+ +++ K G RV    
Sbjct: 114 ATHYIAEIIELVEQLIARRHAYVANNGDVMFSVDTAPGYGALSRQDLEQLKAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGE-YVNYWMHTGMVMVDREKMSKSLNNFFTMRDVL-------MHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  IR  ++  HYR  +++T + L +A   L +            ++      +     A
Sbjct: 286 AETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDAAASAAGGDAFESRFRDA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNAS------AHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D       +      A +LG +E   E   ++ 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDAAAANGLAAALRRLAGVLGLLEQDPELFLQSG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+++R    + K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|311896844|dbj|BAJ29252.1| putative cysteinyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 464

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 169/472 (35%), Positives = 257/472 (54%), Gaps = 51/472 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T+ R++ +F  + P  + +Y+CG TV    HIG+ R  + FDV+ R  RY   +
Sbjct: 2   SLRLYDTMTRQVRDFVPLVPGCVSIYLCGATVQAPPHIGHIRSGLNFDVMQRWFRYRGYD 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDK+I + R++            I S N + F +    L CL P+ +P
Sbjct: 62  --VTFVRNVTDIDDKVIAKGREQSTDW------WKIASANERAFSEGYAALGCLPPSVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+P+MI +++ +I  GHAY A+  + F  ++ P+Y   S ++++  +      E  
Sbjct: 114 RATGHVPEMIEMMRGLIERGHAYAADGNVYFAVTTFPDYLELSNQELENLRQPAGDNET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGGLDLIFP
Sbjct: 173 GKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGRAFDIHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      +  AN W+HN ++ L G KMSKS GN + ++E++       R W 
Sbjct: 233 HHENEIAQSRAYG--DDFANFWVHNAWVTLAGEKMSKSLGNSVLVSEMV-------RRWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK-GIID------PAVLS 353
             V+R  +   HYR  I+++ + L EAE   ++   + + +  + G +D      PA   
Sbjct: 284 PIVLRYYLAGPHYRSMIEYSEESLREAETGFARIEGFIERAVERCGPVDPAPEVPPAFAE 343

Query: 354 ALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNASAHILGIEVCKEH-- 400
           A+ +DL    A+  +H   R           EST     L    A   +LG++   E   
Sbjct: 344 AMDDDLGVPQALAVVHTAVRQGNSALGADDKESTAAR--LAEVRAMLGVLGLDPLDEQWA 401

Query: 401 --------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   L   +   +  ++++R      K F++AD IR QL + G  +ED
Sbjct: 402 DGAGQGEELTGVVDALVRLVLEQRQAARARKDFATADAIRDQLGAAGLAVED 453


>gi|148983973|ref|ZP_01817292.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|148992298|ref|ZP_01822021.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|149010789|ref|ZP_01832160.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168482827|ref|ZP_02707779.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168488279|ref|ZP_02712478.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168492751|ref|ZP_02716894.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|221231418|ref|YP_002510570.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854126|ref|YP_002735638.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225856294|ref|YP_002737805.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|147765270|gb|EDK72199.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147924120|gb|EDK75232.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147928924|gb|EDK79936.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|172043769|gb|EDT51815.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183573040|gb|EDT93568.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183576856|gb|EDT97384.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|220673878|emb|CAR68383.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225723999|gb|ACO19852.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225725363|gb|ACO21215.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|301799643|emb|CBW32201.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|332074402|gb|EGI84878.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332203756|gb|EGJ17823.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 447

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/469 (39%), Positives = 254/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++A+  ++ N+D   +  A A    I GI   +E L+     
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|89075764|ref|ZP_01162152.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048496|gb|EAR54071.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 460

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 184/484 (38%), Positives = 265/484 (54%), Gaps = 53/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I P  I MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEAFTPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+ RNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFARNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALGMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A+N +++F+ S   +YG  S++ +D+ + G RV    
Sbjct: 114 ATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
              +R  ++  HYR  ++++ + L +A   L +     TS   +D ++ +          
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEENLKQARSALER---LYTSLRGLDTSIEAAGGEEFVARF 342

Query: 354 --ALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
             A+ +D NT  A   +  +ARE         TK   L       A +LG+         
Sbjct: 343 KEAMDDDFNTPEAYSVMFDMAREINRLKTDDVTKASALGSRMRELADVLGLLSQEPEAFL 402

Query: 398 KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    ++ ++A IE L+Q+RL     K +++AD  R +L + G ILED      G + T 
Sbjct: 403 QGGAGEDDNVAEIEALIQQRLDARAAKDWAAADEARDKLLAMGIILED------GAQGTT 456

Query: 457 WKQK 460
           W++K
Sbjct: 457 WRRK 460


>gi|304438773|ref|ZP_07398701.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372775|gb|EFM26353.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 461

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 181/485 (37%), Positives = 259/485 (53%), Gaps = 55/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R + EF  +    + MY CGPTVY+F H+GNARP+++FD L R   + Y   
Sbjct: 1   MKLYNTLSRSLEEFVPVKEGQVNMYNCGPTVYNFIHVGNARPLVIFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDKII RA +EH         + I+ +  ++F KD   L      T  P
Sbjct: 59  DVNFVVNFTDIDDKIINRANEEHVDF------TEISERYIKEFKKDANGLHLYDYETINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT  I +MI  I+ +     AY  + ++ FD +   +YG  S++ IDE   G R+    
Sbjct: 113 RATEMIKEMIEFIKILESKDAAYVLDGDVYFDINKAKDYGKLSKKNIDELMAGARIGVAE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK+    EP WESPW  GRPGWHIECS M+   LG   DIH GG DL FP
Sbjct: 173 GKRNPGDFVLWKKKKEGEPSWESPWSEGRPGWHIECSVMAKTILGDTIDIHSGGEDLQFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+  +  AN W+HNG +N++  KMSKS GNF TI E+        + + 
Sbjct: 233 HHENEIAQSETANG-KTFANYWLHNGMINVDNEKMSKSKGNFFTIREV-------SKEYD 284

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTS-------KGI 346
             V+R  +L  HYR PI+F          +++R+  A+  L K  + + +       K +
Sbjct: 285 LEVLRYFLLTCHYRSPINFSHEVMDQCKASLERMYNAKEKLEKLIENANAGSLDEEVKEL 344

Query: 347 IDPAVL---SALYNDLNTVSAIQALHKLAR-ESTKNHD--------LLPIFNASAHILGI 394
           +D  V     A+ +D+NT  A+ A+  + +  +TK  D        +    N  + +LGI
Sbjct: 345 VDAEVKYFEDAMEDDINTADALTAIFNIVKIINTKVDDSSKETLEYVRDSLNKLSKVLGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
              KE   + +S   E L  ERL   K K ++ +D +R +L + G  ++D       +  
Sbjct: 405 LERKE---EGLSPEEEALFYERLEARKNKDYAKSDELRDKLLAMGIEVKD------SREG 455

Query: 455 TRWKQ 459
           T WK+
Sbjct: 456 TTWKR 460


>gi|109894929|sp|Q21YS0|SYC_RHOFD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 459

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 178/465 (38%), Positives = 252/465 (54%), Gaps = 44/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R I     + P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+   G +
Sbjct: 3   LRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVS-GLR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKII+RA +        ++I  +T +      +D   L    PTH+PR
Sbjct: 62  -VTYVRNVTDIDDKIIKRALEN------GESIRALTERMVDALHQDADALGIERPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +PQM+ LI  +   G AY+A N ++ +     P YG  S + +DE + G RV    
Sbjct: 115 ATEFVPQMLSLIGRLEQKGLAYQAVNGDVNYAVRKFPGYGKLSGKSLDELRAGERVAVAD 174

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK + P EP    W+S +G+GRPGWHIECSAM    LG+  DIHGGG DL
Sbjct: 175 GKDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A+IW+HNGF+  +  KMSKS GNF TI ++L        
Sbjct: 235 QFPHHENEIAQSEGATG-KPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILA------- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A   R  ++  HYR  ++ +   L +A   L +     T+  ++ P  L        
Sbjct: 287 RYDAETTRFFIIRAHYRSALNHSDAHLDDARNSLKR---LYTALDLVAPEPLLEIDWRQP 343

Query: 353 ------SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI-----EVCKE 399
                 +A+  D  T  A+  + +LA E  K  D  L  +  A    LG+     +V  +
Sbjct: 344 FAARFKAAMDEDFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFLQ 403

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + +I  L+ +R      K F+ AD IR+ L ++G +L+D
Sbjct: 404 AGATLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKD 448


>gi|295101451|emb|CBK98996.1| cysteinyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 465

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 185/473 (39%), Positives = 267/473 (56%), Gaps = 51/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y  G K
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYR-GNK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E  S+        +  +   +++KD   L C  PT QPR
Sbjct: 60  -VIYVSNITDIDDKLIKKGQEEGTSM------KEVAQRFEAEYLKDAAGLNCKKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
           AT HI Q++ +++++I  GHAY A N ++ F   S P YG  S  K+D+ + G R     
Sbjct: 113 ATEHIQQILDIVKDLIESGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A  W+HNGF+N++ +KMSKS  NF T+ ++     +  
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDVANLYGY-- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP- 349
                  IR  ML   YR P+++TV  +   +  L +         +  + T+ G  +  
Sbjct: 290 -----EPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTAFGTDETL 344

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARE-------STK--NHDLLPIFNASAHI 391
                       +A+ +DLNT  A+ A+  L ++       S+K         F+    +
Sbjct: 345 KEKAEEAKKKFCTAMDDDLNTPDALAAVFDLVKDINTLSAASSKAALEAGAAAFDEITGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D
Sbjct: 405 LGLMYNRK--KDEVPAEVTELVEKRAAAKKAKDWAAADAIRAQLTGMGWAVKD 455


>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254781698|sp|B7VGZ1|SYC_VIBSL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 461

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 181/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LNFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDIDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L+        + 
Sbjct: 234 HHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPA--------VLSA 354
           A  +R  ++  HYR  ++++   L +A   L +   +     +   PA          +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFSTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE-------VCKE 399
           + +D NT  A   L ++ARE          K   L  +    A I+GI        +  +
Sbjct: 346 MNDDFNTPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQGD 405

Query: 400 HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 406 AAGNDDEVAEIEGLIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|257888689|ref|ZP_05668342.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824743|gb|EEV51675.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 470

 Score =  303 bits (777), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 267/493 (54%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANELGITAPE------VADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +K AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPA 350
                 V+R  M  T YR PI ++   + EA   L          K+ Q + S+ + D A
Sbjct: 290 ----PQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                        +  + +D N  + I  +++LA+       ++  +  +L     +F+ 
Sbjct: 346 DKITLLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLED--T 460

Query: 448 PDNGQRMTRWKQK 460
           P      TRW+++
Sbjct: 461 PQG----TRWRRE 469


>gi|323350502|ref|ZP_08086164.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123184|gb|EFX94869.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 447

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 177/468 (37%), Positives = 251/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVTALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  +N W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFSNYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN-- 357
               V+R      HYR+PI+FT + + +A   L     T      G  D A L A  +  
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 358 ------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
                 D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQEARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 461

 Score =  303 bits (776), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LNFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I +++ L++ +I  G AY A+N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIVELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L+        + 
Sbjct: 234 HHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPA--------VLSA 354
           A  +R  ++  HYR  ++++   L +A   L +   +     +   PA          +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFSTA 345

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIE-------VCKE 399
           + +D NT  A   L ++ARE          K   L  +    A I+GI        +  +
Sbjct: 346 MNDDFNTPEAYSVLFEMAREINRIKTESVEKASALGALMRELADIIGILHQDPEAFLQGD 405

Query: 400 HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 406 AAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|227552721|ref|ZP_03982770.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257897353|ref|ZP_05677006.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|227178121|gb|EEI59093.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833918|gb|EEV60339.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 470

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 267/493 (54%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANELGIAAPE------VADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +K AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPA 350
                 V+R  M  T YR PI ++   + EA   L          K+ Q + S+ + D A
Sbjct: 290 ----PQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                        +  + +D N  + I  +++LA+       ++  +  +L     +F+ 
Sbjct: 346 DKITLLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLED--T 460

Query: 448 PDNGQRMTRWKQK 460
           P      TRW+++
Sbjct: 461 PQG----TRWRRE 469


>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 482

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 174/505 (34%), Positives = 262/505 (51%), Gaps = 69/505 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M +++ +YNTL RK   F+ + P  ++MYVCG T Y+ +H+GNARP + +DV+ R L++ 
Sbjct: 1   MMRELTVYNTLSRKKEAFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VT+++N TD+DDKII  A  E  S         I ++    + +   +L      
Sbjct: 61  --GYAVTHIQNFTDVDDKIINAANGEEVSW------DTIANRYIASYFEVMDKLHIQRAD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PR + H+  +I +I  +I +GHAYE + ++ +   S  +YG  S R +D+   G R+ 
Sbjct: 113 KYPRVSEHMDDIIAMISKLIENGHAYELDGDVYYRVQSFEHYGELSHRSLDDMMAGARIE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+ FD HGGG DL
Sbjct: 173 VDDRKENPMDFALWKAAKPSEPSWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDL 232

Query: 241 IFPHHENEIAQ--SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           IFPHHENEIAQ  +CC        N W+HNGF+ ++  KMSKS  NF  + ++LE     
Sbjct: 233 IFPHHENEIAQTEACC--NHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLE----- 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------W--PQTSTSKGII 347
              +    +R  ++  HYR P+DF+ +RLTE    L +         W   Q S  K  +
Sbjct: 286 --HYSPDALRYFLISNHYRSPLDFSDERLTEMTRSLERLGTAIDNTLWLLEQPSGGKSEL 343

Query: 348 DPAVL-----------SALYNDLNTVSAIQALHKLAR----------------ESTKNHD 380
             A+L           +A+ +D NT  A  A+ +LA+                +S    +
Sbjct: 344 SAALLADAQRTMEDFETAMCDDFNTALASAAMFELAKKVNIYTSEVSTNGVPADSAVLSE 403

Query: 381 LLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
           +  IF     ILG+          +  +K+ +  ++ +++ R      K+++ AD IR +
Sbjct: 404 VKRIFKTMTDILGVLEDRWNGTAGKADDKDYAALMDVILELRQECRAQKQYALADAIRDK 463

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L   G  +ED        +  RWK+
Sbjct: 464 LSDLGITIED------SPQGARWKK 482


>gi|194396665|ref|YP_002037254.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194356332|gb|ACF54780.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 447

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 183/469 (39%), Positives = 253/469 (53%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIERGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++A+  ++ N+D   +  A A    I GI   +E L+     
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|328675472|gb|AEB28147.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 459

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 180/463 (38%), Positives = 251/463 (54%), Gaps = 41/463 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +P+AT
Sbjct: 61  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+MI +I+ +I  G+AY+ AN ++ +  S   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMIAMIETLIEKGYAYQGANGDVFYRVSKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPIDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPA------VLSA 354
           V+R  +  T YR  I+++ + L  A+  + K   T          + D A       + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVEKLFNTLRDIEPVEVNLPDDASEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVC--KEHLNKN 404
           + ND NT  A+  L  LA+E          K      +      +LGI     +E+  + 
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406

Query: 405 ISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            S+    IE+L+ ER    K K +  AD IR QL+ +G ILED
Sbjct: 407 DSVDVGEIERLIVERTQAKKDKNYLRADEIRNQLQEQGIILED 449


>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 465

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 168/472 (35%), Positives = 255/472 (54%), Gaps = 49/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ RK  EF  +    ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVFNTIARKKEEFIPLSEKEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA+++      N  +  +  K  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRAKED------NITVKELGDKFIEEYYKDADSLNIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I +++  ++ +I  G+AYE + ++ F T    +YG  S + +++ + G R+     
Sbjct: 113 ATEYINEIVDFVKELIDRGYAYEVDGDVYFHTKKFKDYGKLSGQNLEDLQAGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W+SPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAVWKSQKPGEPAWKSPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLAFPH 232

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE+AQS    R  KT A  W+H+ F+N+   KMSKS  NF T  E+LE        + 
Sbjct: 233 HENEVAQSEA--RTGKTFAKYWMHSAFVNVNNEKMSKSLNNFFTAREILE-------KYD 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAV-- 351
           + VIRL ML  HYR  I+F+++ L   +  + +            + +  + ++D  V  
Sbjct: 284 SDVIRLFMLSGHYRTQINFSMESLESMKAAMDRLYNSISNLESLLEETKQEELMDQEVEY 343

Query: 352 -----------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI------ 394
                      +  + +D NT  A+  +  L R+   N  +        H L +      
Sbjct: 344 IKILDGYKEKYIEKMDDDFNTADAVSVIFDLIRDINTNVKIDSSKKLIKHCLNLIKELGK 403

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + ++    N+   IE L++ER    K K ++ +D IR  L+ +G +LED
Sbjct: 404 PLGILQKSKKGNLEEKIEALIEERQQARKDKNWALSDKIRDDLKEQGILLED 455


>gi|312873891|ref|ZP_07733929.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090567|gb|EFQ48973.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 470

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 180/477 (37%), Positives = 262/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L+              KN  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELSLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
 gi|187629804|sp|A0PXS5|SYC_CLONN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
          Length = 466

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 176/480 (36%), Positives = 251/480 (52%), Gaps = 65/480 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y  G K
Sbjct: 1   MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E      N  +  +  +   ++ KD   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIHEYYKDADGLNIKRATANPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++ ++I  ++++I  G+AYE N ++ F T     YG  S + +D+ + G R+     
Sbjct: 113 ATEYMDEIIQFVKDLIDKGYAYEVNGDVYFSTKQFKEYGKLSGQNLDDLQAGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W  PWG+GRPGWHIECS M+   LG   DIH GG DL+FPH
Sbjct: 173 KKDPMDFAIWKSEKPGEPSWNCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    R  KT AN W+H+ +LN+  +KMSKS  NF T  E+LE        + 
Sbjct: 233 HENEIAQSEA--RNGKTFANYWMHSAYLNINNKKMSKSLNNFFTTREILE-------KYD 283

Query: 304 APVIRLAMLMTHYREPIDFT-----------------------------VQRLTEAEILL 334
           A VIRL ML  HYR P++F+                             V ++TE E   
Sbjct: 284 AEVIRLFMLSAHYRTPLNFSDDLLQSAKASNERLYNAIGNLERLLDEVKVDKVTENEKEY 343

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPI 384
            K  ++   K I        + +D NT  AI  +  L ++   N +           L +
Sbjct: 344 VKNLESYKEKYI------EKMDDDFNTADAISVIFDLVKDINTNINTESSKELVEYSLEL 397

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  LGI      L+ N    IEKL+++R    K K ++ AD IR  L+++G +LED
Sbjct: 398 IRELGKPLGILQKSTMLDLNAE--IEKLIEQRQQARKDKDWALADKIRDDLKARGIVLED 455


>gi|257899915|ref|ZP_05679568.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837827|gb|EEV62901.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 470

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 264/493 (53%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANELGITAPE------VADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +K AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPA 350
                 V+R  M  T YR PI ++   + EA   L          K+ Q + S+ + D A
Sbjct: 290 ----PQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNA 387
                        +  + +D N  + I  +++LA+            +T       +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPEVSATVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLED--T 460

Query: 448 PDNGQRMTRWKQK 460
           P      TRW+++
Sbjct: 461 PQG----TRWRRE 469


>gi|328884016|emb|CCA57255.1| Cysteinyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 466

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 176/485 (36%), Positives = 265/485 (54%), Gaps = 59/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P ++ +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFTPLTPGHVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFDYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F      L CL P+++P
Sbjct: 62  -VTFIRNVTDIDDKIIAKGADQGRPWWSIG-------YENERAFNSGYDALGCLPPSYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
           RAT H+P+MI +++ +I  GHAYEA+  + FD  S P Y   S + ID+     R P + 
Sbjct: 114 RATGHVPEMIEMMRGLIERGHAYEADGSVYFDVRSFPGYLELSNQDIDD----LRQPAED 169

Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL
Sbjct: 170 GITGKRDPRDFAMWKATKPGEPDWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDL 229

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ+      +  A+ W+HN ++ + G KMSKS GN + ++E++       +
Sbjct: 230 IFPHHENEIAQAKAFG--DDFASYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------K 280

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIID--------P 349
           +W   V+R  +   HYR  I+++ + L EAE   ++   + Q +T K   D        P
Sbjct: 281 AWRPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRATEKAGKDVAPAAEVPP 340

Query: 350 AVLSALYNDLNTVSAIQALHKLARE-----STKNHD----LLPIFNASAHILGIEVCKEH 400
           A   A+ +DL    A+  +H   R+     +  + D     L    A   +LG++    H
Sbjct: 341 AFAEAMDDDLGVPHALAIIHTTVRQGNSALAADDKDEAIARLAEVRAMLGVLGLDPLDPH 400

Query: 401 ----------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                     L+  +   +  ++++R    + K +++AD IR QL   G  +ED  +PD 
Sbjct: 401 WAEETGGGEELHGAVDTLVRLVLEQRESARERKDWATADAIRDQLNQSGLAIED--SPD- 457

Query: 451 GQRMT 455
           G R T
Sbjct: 458 GPRWT 462


>gi|163785456|ref|ZP_02180059.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879275|gb|EDP73176.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 436

 Score =  303 bits (776), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 156/390 (40%), Positives = 221/390 (56%), Gaps = 36/390 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  +  EF  I+P  +++Y CG TVYD  H+G+ R +IVFD++ R LRY     
Sbjct: 3   LKVYNTLSGQKEEFVPINPGEVKIYTCGVTVYDVNHVGHGRSLIVFDMIRRYLRYL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII RA+ E   +P     ++I  +  +++ +D           +PR
Sbjct: 61  NVKFVRNFTDVDDKIINRAKNE--CLPF----TVIADRYIKEYFQDAENFRIEPADVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP +I  IQ +I  G+AYE   ++ F      +YG  S+R +DE   G RV     
Sbjct: 115 VTTHIPDIIDFIQKLIDKGYAYEVEGDVYFSVRKFKDYGKLSKRSVDELIAGARVEPGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK S   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL FPH
Sbjct: 175 KKDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQ+      +  A  WIHNG + + G+KMSKS GN+IT+ E+          +  
Sbjct: 235 HENELAQAEALSE-KPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIY-------SKYEP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI-------------LLSKWPQTSTSKGIIDPAV 351
            ++RL +L  HYR P+DF+ +++ E +              +L K P+    +G +  A+
Sbjct: 287 DILRLLVLSVHYRSPLDFSWEKMEETKKAYERLKNAMDEYEILEKLPENPDFEGHLYDAI 346

Query: 352 -------LSALYNDLNTVSAIQALHKLARE 374
                   +A+ +D NT  A+ AL  L RE
Sbjct: 347 AKAEQGFYAAMSDDFNTPEALAALFSLVRE 376


>gi|325695526|gb|EGD37426.1| cysteine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 447

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 175/468 (37%), Positives = 249/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PKE-----VADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN-- 357
               V+R      HYR+PI+FT + + +A   L     T      G  D A L A  +  
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 358 ------DLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
                 D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IECLIEERQVARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|67922209|ref|ZP_00515723.1| Cysteinyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67855912|gb|EAM51157.1| Cysteinyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 482

 Score =  303 bits (775), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 178/488 (36%), Positives = 257/488 (52%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++  F  + P  + MY CG TVYD+ H+G+AR  I++D++ R L++   E 
Sbjct: 3   LKIYNTQTRRLEPFVTLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLKWRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDIDDKI+ RA+++  S+      + I+ +  + + +D   L  +     PR
Sbjct: 62  -VTYVQNFTDIDDKILRRAQEQGVSM------ADISERFIEAYFEDIRPLNVMDADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
            T++I  +  LI+ ++   +AY A+ ++ F   +   YG  S R     + G   RV   
Sbjct: 115 VTDNISGIQQLIEVLLEKNYAYAADGDVYFHVEAFEQYGKLSGRSQSMMQAGASGRVAVS 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P   HKK+P+DF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPTNSHKKHPSDFALWKSAKPEEPAWDSPWGEGRPGWHIECSAMVRGLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+  +  A  W+HNG + + G KMSKS GNF TI ELL      
Sbjct: 235 DLVFPHHENEIAQSEAANG-KPLAKYWVHNGMVTVNGEKMSKSLGNFTTIRELLN----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSK-------WPQTST 342
            R     VIRL +L  HYR+P+DFT + ++ A          +L  +       W +   
Sbjct: 289 -RPLEPMVIRLFVLQAHYRKPLDFTEEAISSATNGWQTLQQGLLFGEKYGNRLGWEKNQE 347

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARE--------------STKNHDLLPIFNAS 388
               +     + + +D N+   +  L +LA+               +T   DL   +   
Sbjct: 348 LDSAVIEQFKATVDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKITTDGEDLQRQWQTL 407

Query: 389 AHILGI-------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            H+ GI       EV  E  N      I KL+Q+R    K+K ++ +D IR+QL+  G  
Sbjct: 408 VHLAGILGLEAKSEVGSEDTNNFDQAEITKLIQQRNAARKVKDYAESDRIREQLQEMGIT 467

Query: 442 LEDYKNPD 449
           L D  N +
Sbjct: 468 LIDQPNGE 475


>gi|254373761|ref|ZP_04989244.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|290954116|ref|ZP_06558737.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|151571482|gb|EDN37136.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 459

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 178/467 (38%), Positives = 251/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           + A+ ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 344 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    + S  IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 404 KQGDGADAS-EIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 449


>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 482

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 185/489 (37%), Positives = 268/489 (54%), Gaps = 55/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IY+++  +   F  ++   + MYVCG TVYD+ HIG+AR M+ FDV+ R LR+   + 
Sbjct: 10  ITIYDSMSGQKRPFTPLEAGKVGMYVCGMTVYDYCHIGHARVMVGFDVVVRWLRHIGYD- 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA+         ++I  +T +  +   +D   L C  P  +P+
Sbjct: 69  -VNYVRNITDIDDKIINRAKDN------GESIYELTDRFIKAMHEDADNLGCERPNSEPK 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPE 181
           AT+ IPQM +LIQ +     AY+ A  ++ +   +   YG  S+R++ + + G   RV  
Sbjct: 122 ATDFIPQMQHLIQTLESKNLAYQGATGDVYYAVENFAEYGKLSKRRLADMQAGASERVNV 181

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  KKNP DF+LWK +   EP    W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG 
Sbjct: 182 ETDKKNPFDFVLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHGGGH 241

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI +++      
Sbjct: 242 DLQFPHHENEIAQSEGATG-KTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVM------ 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPA------- 350
           G+  P   IR  +L +HYR P++F+   L EA+  L++  Q   S + + +PA       
Sbjct: 295 GQFHPE-TIRFFILSSHYRSPVNFSDSALKEAQTSLTRLYQALKSVESLTEPAGEIDETP 353

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---------------HI 391
                  A+ +D N+  A+  L  LARE  K  +L  +   +                +I
Sbjct: 354 FETPFNQAMCDDFNSAGAVSVLFSLAREINKAVNLETVEGNAQALALATLLKDLAQPLNI 413

Query: 392 LGI---EVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           L +   +  +  + +   ++   IE  ++ R      K F+ AD IR  L+++G  LED 
Sbjct: 414 LQLNPTDFLQAKVGETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSDLKAQGIELEDG 473

Query: 446 KNPDNGQRM 454
           KN    +R+
Sbjct: 474 KNGTTWRRV 482


>gi|118496920|ref|YP_897970.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|187629823|sp|A0Q4Q1|SYC_FRATN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118422826|gb|ABK89216.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
          Length = 459

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 176/466 (37%), Positives = 251/466 (53%), Gaps = 47/466 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVC--KEHL 401
           + A+ ND NT  A+  L  LA+E          K      +      +LGI     +E+ 
Sbjct: 344 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 403

Query: 402 NKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +   +    IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 404 KQGDGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 449


>gi|90580099|ref|ZP_01235907.1| cysteinyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438984|gb|EAS64167.1| cysteinyl-tRNA synthetase [Vibrio angustum S14]
          Length = 460

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 185/484 (38%), Positives = 265/484 (54%), Gaps = 53/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALGMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A+N +++F+ S   +YG  S++ +D+ + G RV    
Sbjct: 114 ATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------NHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
              +R  ++  HYR  ++++   L +A   L +     TS   +D +V +          
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARSALER---LYTSLRGLDTSVEAAGGEEFVTRF 342

Query: 354 --ALYNDLNTVSAIQALHKLARE--STKNHDLLPI------FNASAHILGI------EVC 397
             A+ +D NT  A   L  +ARE    K  D+             A +LG+         
Sbjct: 343 KEAMDDDFNTPEAYSVLFDMAREINRLKTDDVATASALGARMRELADVLGLLSQEPEAFL 402

Query: 398 KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    ++ ++A IE L+Q+RL     K +++AD  R +L + G ILED      G + T 
Sbjct: 403 QGGAGEDDNVAEIEALIQQRLDARAAKDWAAADEARDKLLAMGIILED------GAQGTT 456

Query: 457 WKQK 460
           W++K
Sbjct: 457 WRRK 460


>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 461

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 177/482 (36%), Positives = 255/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA      I   +    +T++   +   D   L  + P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNIVHPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A+N +++F   + P YG+ SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSRCA-HDGPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +             +      +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDLSVAAHGGDEFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE  +         + L       + +LG +E   E   +N 
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +         IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDNDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 465

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 182/476 (38%), Positives = 253/476 (53%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT      +F  I+P   R+YVCG T YD  HIG+AR  + FD + R L Y   E 
Sbjct: 2   IRLYNTQSSSKEDFIPIEPGKARIYVCGVTTYDHCHIGHARSAVAFDSIRRYLSYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII RAR+        +    +  +   +  +D   L  L PT  PR
Sbjct: 61  -VTFVKNYTDIDDKIINRAREN------GEEWKALAERFISEHDRDMAALYVLPPTIAPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+MI LI+ ++ +G+AY+  ++I F       YG  S + +++ + G+RV     
Sbjct: 114 ATEHLPEMIALIEKLLDNGYAYKGGDDIFFRVHRFTEYGKLSHKALEDLQSGSRVEVNPL 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK     EP WE+ +G GRPGWHIECSAM   +LG+VFDIHGGG DLIFPH
Sbjct: 174 KENPLDFVLWKGKKEGEPSWEASFGAGRPGWHIECSAMGHKHLGRVFDIHGGGKDLIFPH 233

Query: 245 HENEIAQS----CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           HENEIAQS     CA      A  WIHNGF+N+   KMSKS GNF TI E+L+       
Sbjct: 234 HENEIAQSQAGYGCA-----PARYWIHNGFVNINNEKMSKSLGNFFTIKEILQ------- 281

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGI---- 346
            +   V+RL +  THYR PIDF  + +T A   L K             T TS  I    
Sbjct: 282 HYDPEVLRLFLAQTHYRSPIDFCEENMTMARQALEKLYRFLENFENHEDTRTSDSIAPVL 341

Query: 347 --IDPAVLSALYNDLNTVSAIQAL----HKLARESTKNHDLLPIFNAS---AHILGIE-- 395
             I      A+ +D N+  A+ +L    H L + +  + D   I++       +LGI   
Sbjct: 342 SDITRKFEEAMDDDFNSALALASLFEGVHTLNKLNPSSADAKGIYDTYCRLGDVLGIFQS 401

Query: 396 -----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                  ++  ++  +  I   ++ R    + K F++AD IR +L   G  ++D K
Sbjct: 402 LPSQWFARQSTSQLSADEIAARIEARNAARRDKDFATADRIRDELLENGVEIKDSK 457


>gi|260887698|ref|ZP_05898961.1| cysteine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838629|ref|YP_004413209.1| cysteinyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862578|gb|EEX77078.1| cysteine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746393|gb|AEB99749.1| cysteinyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 476

 Score =  303 bits (775), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 174/498 (34%), Positives = 256/498 (51%), Gaps = 67/498 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+  EF+ ++P    +Y CG T Y+  HIGNARP + +DV+ R L     EK
Sbjct: 2   LRVYNTLTREKEEFKPLEPGKASIYCCGVTPYNDPHIGNARPFVTWDVVRRYL-----EK 56

Query: 65  ---CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+N TDIDDKII RA++        +    +      ++ K    L       
Sbjct: 57  KGYAVHYVQNFTDIDDKIIRRAKE------AGETWKELADHYIAEYFKAIDALNVRRADA 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PR + HI  ++ +I+ +I  G+AY  + ++ +       YG  S R +D+ + G RV  
Sbjct: 111 YPRVSEHIADVLAVIEKLIEKGYAYALDGDVYYSVERFAGYGKLSGRSLDDMQAGARVGV 170

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K +P DF LWK + P EP W+SPWG+GRPGWHIECS MS  YLG+ FD HGGG DLI
Sbjct: 171 DERKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSMKYLGETFDFHGGGSDLI 230

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHHENEIAQ+  C       A  W+HNGF+ +   KMSKS  NF T+ ++LE  K+ G 
Sbjct: 231 FPHHENEIAQAQACTGDDHSFARYWLHNGFITIHDEKMSKSKNNFFTVKDILE--KYAGE 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPAVLS--- 353
                V+R  ++ THYR P+DFT +RL EA+  L++    W   +      D +  S   
Sbjct: 289 -----VVRFFIVQTHYRSPLDFTDERLVEAKTSLARLKNSWDNAAELSSRKDESSGSAKS 343

Query: 354 --------------ALYNDLNTVSAIQALHKLARE----------------STKNHDLLP 383
                         A+ +D NT  AI  L  L++E                +     +  
Sbjct: 344 LLAAAMEAKAAFYEAMDDDFNTALAISHLFSLSKEINIYYNEVTTGAAAFDAANFAKVRA 403

Query: 384 IFNASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           ++   A ++GI   KE    +  +   +E L+  R    + K ++ AD++R +L+++G +
Sbjct: 404 VYAEMAEVIGIFEAKEEKAADGLVDSLMELLLNLRQKAREEKNWALADHLRDELKARGVV 463

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           +ED   P       RWK+
Sbjct: 464 IED--TPQG----ARWKR 475


>gi|89900143|ref|YP_522614.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344880|gb|ABD69083.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 470

 Score =  303 bits (775), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 178/465 (38%), Positives = 252/465 (54%), Gaps = 44/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R I     + P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+   G +
Sbjct: 14  LRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVS-GLR 72

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKII+RA +        ++I  +T +      +D   L    PTH+PR
Sbjct: 73  -VTYVRNVTDIDDKIIKRALEN------GESIRALTERMVDALHQDADALGIERPTHEPR 125

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +PQM+ LI  +   G AY+A N ++ +     P YG  S + +DE + G RV    
Sbjct: 126 ATEFVPQMLSLIGRLEQKGLAYQAVNGDVNYAVRKFPGYGKLSGKSLDELRAGERVAVAD 185

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK + P EP    W+S +G+GRPGWHIECSAM    LG+  DIHGGG DL
Sbjct: 186 GKDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGGADL 245

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A+IW+HNGF+  +  KMSKS GNF TI ++L        
Sbjct: 246 QFPHHENEIAQSEGATG-KPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILA------- 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A   R  ++  HYR  ++ +   L +A   L +     T+  ++ P  L        
Sbjct: 298 RYDAETTRFFIIRAHYRSALNHSDAHLDDARNSLKR---LYTALDLVAPEPLLEIDWRQP 354

Query: 353 ------SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI-----EVCKE 399
                 +A+  D  T  A+  + +LA E  K  D  L  +  A    LG+     +V  +
Sbjct: 355 FAARFKAAMDEDFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFLQ 414

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + +I  L+ +R      K F+ AD IR+ L ++G +L+D
Sbjct: 415 AGATLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKD 459


>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|21264018|sp|Q97ED6|SYC_CLOAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 464

 Score =  303 bits (775), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 173/471 (36%), Positives = 256/471 (54%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ RK  EF  + P+ ++MYVCGPTVY+F HIGNAR  IVFD + +   Y  G K
Sbjct: 1   MKIYNTMTRKKEEFVPVKPNEVQMYVCGPTVYNFFHIGNARTFIVFDTVRKYFEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I +A  E  S+        +  +  +++ +D   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIAKANNEGVSV------KELGDRYIKEYYEDADGLNLERATCNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  ++ +   G+AYE + ++ F+T++   YG  S + ++++  G  +     
Sbjct: 113 ATEYIGKIIDFVKGLQDEGYAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATIAVDDR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+PADF LWK   P EP WESPWG+GRPGWHIECS M+   LG   DIH G +DLIFPH
Sbjct: 173 KKSPADFALWKSEKPGEPSWESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAIDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H  +LN+   KMSKS  NF+T  ++L       + + A
Sbjct: 233 HENEIAQS-EARTGKPFSKYWMHAAYLNINNEKMSKSLNNFLTARDIL-------KEYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSAL 355
            VIRL +L  HYR P++FT + +  A+  L +   T         +T++   D   L AL
Sbjct: 285 EVIRLFLLSAHYRTPLNFTEESIEAAKTSLERLYNTINNLGSLLNNTAESNDDSEYLKAL 344

Query: 356 -----------YNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGI 394
                       +D NT   I  +  LA++   N             + +       LGI
Sbjct: 345 DSYREKFIEKMDDDFNTADGISVIFDLAKDINININGKSSKAAVEKAISLMRELGKPLGI 404

Query: 395 -EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  ++H   N+   I+ L+++R    K K ++ AD IR  L+ +G +LED
Sbjct: 405 LQKVEKH---NLEDEIQNLIEQRQNARKNKDWALADKIRDDLKERGIVLED 452


>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
          Length = 500

 Score =  303 bits (775), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 188/493 (38%), Positives = 261/493 (52%), Gaps = 66/493 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++K+YNT+ ++      I P  I +YVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 5   KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHL- 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  VT+VRN TD+DDKII+RA +     P++     ++++   +++ D   L CL PTH
Sbjct: 64  -DYDVTFVRNFTDVDDKIIDRANKNGED-PLD-----LSNRFCDEYLVDMGALQCLPPTH 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR + H+  +I +I+ II     Y    ++ F     PNYG  S + ++  + G RV  
Sbjct: 117 QPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS HYL   FDIHGGG DL 
Sbjct: 177 DSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLK 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG + +   KM+KS  NF TI E+         S
Sbjct: 237 FPHHENEIAQTCAACE-DSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITA-------S 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRL---TEAEILLS-----------KWPQTSTSKGII 347
           +    +R  ++   YR P+ FT  +L   +EA   LS           K  QT+  K II
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFTASQLESSSEALYCLSPYQDALSEDGGKSEQTAEGKDII 348

Query: 348 ---DPAVLSALYNDLNTVSAI------------QALHKLARESTKNH-----DLLPIFNA 387
                   S + +DLNT   +             +L KL +   K        L+ I  A
Sbjct: 349 KKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIEKA 408

Query: 388 SAHILGI----------EVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYI 431
           +  +L +          E+ KE   K +  A      I +L++ER+   K K F+ +D I
Sbjct: 409 AREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEI 468

Query: 432 RKQLESKGFILED 444
           R++L  KG  L D
Sbjct: 469 REKLTRKGIALMD 481


>gi|168206821|ref|ZP_02632826.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170661739|gb|EDT14422.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 466

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 248/473 (52%), Gaps = 51/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y  G K
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++        I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILE-------RYDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP-----------AVL 352
            VIR  ML  HYR+ ++F+   L  A+  + + +      + +ID            A L
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 353 SALY-----------NDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
            +L            +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+   ++    N++  IE L+ +R    K + F+ AD IR +L+ +G ILED
Sbjct: 406 LGM--FQKSTKGNLAEEIEALIAKRQQARKDRDFALADKIRDELKDRGIILED 456


>gi|309806486|ref|ZP_07700490.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167085|gb|EFO69260.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 470

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 180/477 (37%), Positives = 261/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRNIQERLSEKNDVSDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L               KN  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|309809236|ref|ZP_07703106.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871506|ref|ZP_07731599.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872554|ref|ZP_07732622.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|329920498|ref|ZP_08277230.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308170470|gb|EFO72493.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311091916|gb|EFQ50292.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092901|gb|EFQ51252.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|328936174|gb|EGG32627.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 470

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 180/477 (37%), Positives = 261/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L               KN  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|169344133|ref|ZP_02865116.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297744|gb|EDS79843.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 466

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 248/473 (52%), Gaps = 51/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y  G K
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++        I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILE-------RYDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP-----------AVL 352
            VIR  ML  HYR+ ++F+   L  A+  + + +      + +ID            A L
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 353 SALY-----------NDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
            +L            +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNQYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+   ++    N++  IE L+ +R    K + F+ AD IR +L+ +G ILED
Sbjct: 406 LGM--FQKSTKGNLAEEIEALIAKRQQARKDRDFALADKIRDELKDRGIILED 456


>gi|264677338|ref|YP_003277244.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207850|gb|ACY31948.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 461

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 180/467 (38%), Positives = 257/467 (55%), Gaps = 48/467 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R +  F  ++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR   G K
Sbjct: 3   LRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRAS-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PT +PR
Sbjct: 62  -VTYVRNITDIDDKIIKRA------VENGETIRSLTDRMIDALHQDADALGIERPTLEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV    
Sbjct: 115 ATEYVPQMLGMIARLQDKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAVAD 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   EP    W+SP+G GRPGWHIECSAM    LG+ FDIHGGG DL
Sbjct: 175 GKHDPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A  W+HNGF+N++  KMSKS GNF TI ++L       +
Sbjct: 235 QFPHHENEIAQSEGATG-KPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  IR  ++ +HYR P++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 EYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKR---LYTALDLVTPAEVQIDWSNPY 343

Query: 353 -----SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
                +A+  D  T  A+  L +LA E   +K+ ++  +  A    LG+   +    K +
Sbjct: 344 AARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGL--LQAEPQKFL 401

Query: 406 SIAIEKL--------VQERLILLKMKKFSSADYIRKQLESKGFILED 444
               E +        +  R      K ++ AD IRK+L  +G +L+D
Sbjct: 402 QAGAEGVDAAAIEAQIAARAEAKAAKNWAEADRIRKELLDQGIVLKD 448


>gi|113477437|ref|YP_723498.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123160290|sp|Q10XJ9|SYC_TRIEI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110168485|gb|ABG53025.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 489

 Score =  302 bits (774), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 187/495 (37%), Positives = 268/495 (54%), Gaps = 74/495 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+   F+ ++P+ I+MYVCG TVYD+ H+G+AR  I +D + R L  + G +
Sbjct: 3   LKLYNSLTRQEETFEPLEPNIIKMYVCGVTVYDYCHLGHARSYIAWDTMRRYL-IWQGYQ 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RAR+   S+        +  + T+ + +D  RL  L     PR
Sbjct: 62  -VRYVQNFTDIDDKILKRARETGSSM------DSVAKRFTEAYFEDMKRLNVLEADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-- 180
           AT +I ++  LI ++   G AY +  ++ +       YG  S R+++E + G   RV   
Sbjct: 115 ATQNIDRIQNLIHDLEKKGFAYSSGGDVYYQVREFSQYGKLSGRRLEEMQAGASGRVDSE 174

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   KK+P DF LWK +   EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DLETAKKKDPFDFALWKAAKTGEPAWDSPWGKGRPGWHIECSAMVQDCLGETIDIHAGGA 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   +  A  W+HNGF+ + G KMSKS GNF TI +LL+     
Sbjct: 235 DLIFPHHENEIAQS-EASTGKILARYWLHNGFVTINGEKMSKSLGNFTTIRDLLDQ---- 289

Query: 299 GRSWPAPV----IRLAMLMTHYREPIDFTVQRLTEAE---------ILL-----SKWPQT 340
                 PV    +R+ +L   YR+PIDFT + +  A+         IL       K    
Sbjct: 290 ------PVDPMALRMFVLTAQYRKPIDFTEEAIASAKNGWNTIKEGILFPYQYGPKLGWE 343

Query: 341 STSKGIIDPAVL---------SALYNDLNTVSAIQALHKLARESTKNHDLL--------- 382
             +K + D  +L          A+ +D+NT +A+  L +LA++  +  ++L         
Sbjct: 344 MPAKNLSDQTLLLTSYLEKFQKAMDDDINTPAALAILFELAKDLRREGNVLIHEGKTETS 403

Query: 383 --------PIFNASAHILGIEVCKEHLNKNIS-----IAIEKLVQERLILLKMKKFSSAD 429
                       + + +LG+EV  E    NIS     I IE L+Q+RL   K K +S AD
Sbjct: 404 LEELKKQWVTLVSLSQVLGLEVKIEEQVSNISEGLSNIEIESLIQQRLEAKKAKNYSEAD 463

Query: 430 YIRKQLESKGFILED 444
            IR +L+S+G  L D
Sbjct: 464 RIRNELQSQGIKLID 478


>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
          Length = 480

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 181/465 (38%), Positives = 253/465 (54%), Gaps = 41/465 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +      +  S I MYVCG TVYD  H+G+AR  + FD++ R LR+   + 
Sbjct: 22  IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD- 80

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RAR         +    +T +   +   D  +L  L P  +PR
Sbjct: 81  -VTFVRNITDIDDKIIQRARD------TGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 133

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIPQ+I +I+ ++    AY A N +++F T+S   YG  S + I   + GTR+    
Sbjct: 134 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNE 193

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG  FDIHGGG DLIFP
Sbjct: 194 YKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFP 253

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H G + +   KMSKS  NF T+ ++L   +F  +S  
Sbjct: 254 HHENEIAQSTSAND-GPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDIL--NRFDAQS-- 308

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVLSAL 355
              +R  +L  HYR+P++++ + +  A   L++            S            A+
Sbjct: 309 ---VRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDAWRARFCEAM 365

Query: 356 YNDLNTVSAIQALHKLARESTK----NHD----LLPIFNASAHILG-IEVCKEHLNKNIS 406
            +D NT  A+  L +L RE  +    N D    L        ++LG +E   +   KN S
Sbjct: 366 DDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKNRS 425

Query: 407 -------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    IEKL+ +R    +M K+  AD +R +L  +G  LED
Sbjct: 426 DLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLED 470


>gi|139438524|ref|ZP_01772040.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
           25986]
 gi|133776063|gb|EBA39883.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
           25986]
          Length = 488

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 156/333 (46%), Positives = 204/333 (61%), Gaps = 17/333 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+   K  EFQ I+   +RMYVCGPTVYD  HIGNAR  I FDV+ R L     E 
Sbjct: 1   MRIYNSATHKKEEFQPIESGKVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII+RA ++  +       + + ++ + +F+        L P  +PR
Sbjct: 60  -VTFAQNLTDVDDKIIKRANEQGRTA------AEVATEFSDKFIGVMRAANVLDPDVRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I+ +I  GHAY A+N ++ F   S PNYG  S R ID+  +G R+ E  
Sbjct: 113 ATKEIGPMIAMIKTLIEQGHAYAADNGDVYFAVRSDPNYGQVSGRNIDDLMVGARIEENE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP W SPWG GRPGWH EC+AM   YLG   DIHGGG DL FP
Sbjct: 173 DKNDPLDFALWKAAKPGEPSWPSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA   +  +N W+H G L ++G KMSKS GNF T+ E+LE          
Sbjct: 233 HHENECAQATCAWH-QGFSNTWMHTGMLLVDGEKMSKSLGNFFTLAEVLEQHS------- 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           A  +RL ML T YR P+DF+ +RL  AE  L++
Sbjct: 285 AAALRLLMLQTSYRSPLDFSWERLEGAENSLTR 317


>gi|311280587|ref|YP_003942818.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749782|gb|ADO49534.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 461

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 190/482 (39%), Positives = 267/482 (55%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        D + ++  +   +  KD   L  L P ++PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANENG-----EDFVGLV-DRMIIEMHKDFDALNILRPDNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I + + +I  GHAY A+N +++F   S P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIEITERLIERGHAYVADNGDVMFSVPSDPTYGELSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPAWASPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNTWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +             +      +     A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDASAAAAGGEAFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILG-IEVCKEHLNKNI 405
           + +D NT  A   L  +ARE    K  D       +AH      +LG +E   E   +  
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDAQAASAMAAHLRKLSGVLGLLEQDPETFLQGG 405

Query: 406 SIA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           + A       IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|194324147|ref|ZP_03057921.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|194321594|gb|EDX19078.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 464

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 176/466 (37%), Positives = 251/466 (53%), Gaps = 47/466 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 348

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVC--KEHL 401
           + A+ ND NT  A+  L  LA+E          K      +      +LGI     +E+ 
Sbjct: 349 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 408

Query: 402 NKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +   +    IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 409 KQGDGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 454


>gi|310779627|ref|YP_003967960.1| cysteinyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748950|gb|ADO83612.1| cysteinyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 475

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 175/484 (36%), Positives = 261/484 (53%), Gaps = 57/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL+ K+ EF+ +    + MYVCGPTVY++ HIGNARP I FD + R L Y     
Sbjct: 2   LRIFNTLKGKVEEFKPLKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QP 123
            V YV+N TD+DDK+I+RA +E  ++        +  K    + +DT ++        +P
Sbjct: 60  NVKYVQNFTDVDDKMIKRANEEGITLKE------VADKYIAAYFEDTAKVNLKEDGMLRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
           +AT HI +MI LI+ +I    AYE   ++ F   +    YG  S++  ++ + G+RV   
Sbjct: 114 KATEHIGEMIKLIKTLIEKDFAYEVQGDVYFSVKNYNEKYGELSKQNTEDLQSGSRVDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   EP W SPWG+GRPGWHIECSAMS+ YLG  FDIHGGG DLIF
Sbjct: 174 DIKRSPLDFALWKAAKEGEPSWGSPWGKGRPGWHIECSAMSNKYLGPTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  A  WIHNG++N++G KMSKS GNF  + E+LE        +
Sbjct: 234 PHHENEIAQSKCATGGD-FARYWIHNGYINVKGEKMSKSLGNFFLLREVLE-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              V+R  +L +HYR+PIDF+   L +A+  + +   +                     S
Sbjct: 286 EGKVVRFFVLSSHYRKPIDFSEDELNQAKAAVERIENSLMRVLEKMDERDSIGDHLAVES 345

Query: 342 TSKGIIDPAV--LSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------I 384
            +K + +     ++A+  D NT   I ++ +L +E  K  D                  I
Sbjct: 346 LAKALEESKTKFVAAMDEDFNTSQGIGSIFELIKEMNKFMDGTSLDAEGREVLTAASDFI 405

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILE 443
             A   +LG+++  E    N++  +   + E R      + ++ +D IR +L   G  ++
Sbjct: 406 KEAIIEVLGVDIKVEKKVGNMTSELVDFILEIRQNARVERNWALSDKIRDRLGDMGVKIK 465

Query: 444 DYKN 447
           D K+
Sbjct: 466 DGKD 469


>gi|125624812|ref|YP_001033295.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|187629844|sp|A2RMS1|SYC_LACLM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|124493620|emb|CAL98607.1| CysS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071611|gb|ADJ61011.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 448

 Score =  302 bits (774), Expect = 7e-80,   Method: Compositional matrix adjust.
 Identities = 169/462 (36%), Positives = 257/462 (55%), Gaps = 40/462 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A  E+ S         ++ +    F +DT  L     +  P+
Sbjct: 60  -VEYISNFTDVDDKIIKAAASENISTKE------LSERYIAAFYEDTDLLNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  I  MI  IQ ++   +AY +  ++ F  +   +Y   + + + +   G   R  E+
Sbjct: 113 ATEFIEAMIDFIQELLDKDYAYISEGDVYFRVAKSKDYAKLANKNLADLLAGASGRTDEE 172

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            + K++PADF LWK     E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TNLKESPADFALWKSVKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +K  N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQS-EAKTGQKFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVV------ 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYND 358
               ++R  +  THYR P++FT   LTEAE  + K          +   + + L+   ND
Sbjct: 286 -DPQILRFFLTTTHYRRPLNFTDDALTEAENNIKKIENAYRHLDDQAESNLSALTTFRND 344

Query: 359 LNTVSAIQALHKLARESTKNHDLL-------------PIFNASAHILGIEVCKEHLNKNI 405
              V+A+     +A   T  +D +               F+    ILGI   K  + +++
Sbjct: 345 F--VAAMDEDFNIANGMTVFYDFVSWVNKGNGGAEVKAFFDQVLEILGI---KFEIEQSL 399

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              IE +++ER +  +++ F+ +D IR  L+++G +LED K+
Sbjct: 400 DSEIEAMIEERQLAREVRDFAKSDEIRDALKAQGIVLEDTKD 441


>gi|293572688|ref|ZP_06683656.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607274|gb|EFF36628.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 470

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 263/493 (53%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANELGITAPE------VADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +K AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPA 350
                 V+R  M  T YR PI ++   + EA   L          K+ Q + S+ + D A
Sbjct: 290 ----PQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPEVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLED--T 460

Query: 448 PDNGQRMTRWKQK 460
           P      TRW+++
Sbjct: 461 PQG----TRWRRE 469


>gi|332202472|gb|EGJ16541.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 447

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 182/469 (38%), Positives = 252/469 (53%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TVRKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++ +  ++ N+D   +  A A    I GI   +E L+     
Sbjct: 346 VAAMDEDFNAANGITVVFEMTKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFETADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|293553639|ref|ZP_06674263.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602214|gb|EFF32442.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 470

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 263/493 (53%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I    + MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGRVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANELGITAPE------VADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQS-EAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L          K+ Q + S+ + D A
Sbjct: 286 KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLED--T 460

Query: 448 PDNGQRMTRWKQK 460
           P      TRW+++
Sbjct: 461 PQG----TRWRRE 469


>gi|325913157|ref|ZP_08175527.1| cysteine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477578|gb|EGC80720.1| cysteine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 470

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 179/477 (37%), Positives = 261/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTQYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L               KN  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    ++KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDD---TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|168485706|ref|ZP_02710214.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183571202|gb|EDT91730.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 447

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 182/469 (38%), Positives = 255/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLRKFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASA---HILGIEVCKEHLNKNISI 407
            +A+  D N  + I  + ++A+  ++ N+D   +  A A    I GI   +E L+     
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEIFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
 gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
 gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
          Length = 460

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 181/465 (38%), Positives = 253/465 (54%), Gaps = 41/465 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +      +  S I MYVCG TVYD  H+G+AR  + FD++ R LR+   + 
Sbjct: 2   IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RAR         +    +T +   +   D  +L  L P  +PR
Sbjct: 61  -VTFVRNITDIDDKIIQRARD------TGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIPQ+I +I+ ++    AY A N +++F T+S   YG  S + I   + GTR+    
Sbjct: 114 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG  FDIHGGG DLIFP
Sbjct: 174 YKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H G + +   KMSKS  NF T+ ++L   +F  +S  
Sbjct: 234 HHENEIAQSTSAND-GPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDIL--NRFDAQS-- 288

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVLSAL 355
              +R  +L  HYR+P++++ + +  A   L++            S            A+
Sbjct: 289 ---VRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDAWRARFCEAM 345

Query: 356 YNDLNTVSAIQALHKLARESTK----NHD----LLPIFNASAHILG-IEVCKEHLNKNIS 406
            +D NT  A+  L +L RE  +    N D    L        ++LG +E   +   KN S
Sbjct: 346 DDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKNRS 405

Query: 407 -------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    IEKL+ +R    +M K+  AD +R +L  +G  LED
Sbjct: 406 DLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLED 450


>gi|89256953|ref|YP_514315.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115315315|ref|YP_764038.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134301406|ref|YP_001121374.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156503147|ref|YP_001429212.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010049|ref|ZP_02274980.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368215|ref|ZP_04984235.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|254372282|ref|ZP_04987773.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|295312486|ref|ZP_06803255.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|109894902|sp|Q2A1T7|SYC_FRATH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|122324692|sp|Q0BKI3|SYC_FRATO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629822|sp|A7NE53|SYC_FRATF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629824|sp|A4IWF2|SYC_FRATW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89144784|emb|CAJ80122.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130214|gb|ABI83401.1| cysteine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134049183|gb|ABO46254.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134254025|gb|EBA53119.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|151570011|gb|EDN35665.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3549]
 gi|156253750|gb|ABU62256.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 464

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 178/467 (38%), Positives = 251/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 348

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           + A+ ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 349 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 408

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    + S  IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 409 KQGDGADAS-EIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 454


>gi|254369813|ref|ZP_04985823.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122772|gb|EDO66901.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 464

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 178/467 (38%), Positives = 251/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANENGEST------TELVERNIRAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDNASE---YEEKF 348

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           + A+ ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 349 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 408

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    + S  IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 409 KQGDGADAS-EIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 454


>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 504

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 164/385 (42%), Positives = 221/385 (57%), Gaps = 34/385 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NT+  +    Q   P  + +YVCGPTVY + HIGNAR    FDV+ R LR+  G K
Sbjct: 21  IRLFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHR-GLK 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TD+DDKII +A  E    P+      + ++  + F +DT  L  L P   PR
Sbjct: 80  -VRYVRNFTDVDDKII-KAAAETGEAPVE-----LAARYVEIFREDTRALHLLEPDFSPR 132

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++H+P++I +IQ ++  GHAY +  ++ F  SS  +Y   S+R +DE  +G RV     
Sbjct: 133 VSDHLPEIIAIIQKLVDKGHAYASQGDVYFSVSSDEDYAKLSKRNLDELCVGERVQPGEQ 192

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS+ YLG+ FDIHGG LDLIFPH
Sbjct: 193 KREPLDFALWKAAKPGEPAWESPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIFPH 252

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+ +   A  W+H GFL+LEG KMSKS GN + + + L            
Sbjct: 253 HENEIAQSESANGV-TFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALTKVD-------P 304

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGII--DPAV 351
             +R   L THYR P+ F+ + L +AE  +  + +T              KG +  DP  
Sbjct: 305 EALRFFFLATHYRHPLSFSDKALADAETRMEYFYETLRKVDERISGKDFGKGPLHGDPQR 364

Query: 352 L-----SALYNDLNTVSAIQALHKL 371
                 SA+ +D NT   + +L  L
Sbjct: 365 FFTEFESAMDDDFNTAGGLGSLSGL 389


>gi|148988955|ref|ZP_01820355.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925452|gb|EDK76529.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 447

 Score =  302 bits (773), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 180/468 (38%), Positives = 249/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIENGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---HILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + ++A+     +    +  A A    I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLDAE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|309799903|ref|ZP_07694108.1| cysteinyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116493|gb|EFO53964.1| cysteinyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 457

 Score =  302 bits (773), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 178/467 (38%), Positives = 251/467 (53%), Gaps = 37/467 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 12  IKIYDTMSRDLREFVPITKGEVLMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 71  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRYPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 124 VVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 184 TARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 243

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ LET      
Sbjct: 244 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALETID---- 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +DP  L      
Sbjct: 298 ---GQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDPGELQAFKDK 354

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
             +A+  D NT + I  + ++A+  ++ N+D       +A +         + + +   I
Sbjct: 355 FVAAMDEDFNTANGITVIFEMAKWINSGNYDAAVKETLAAMLE--VFGVVFVEEVLDEEI 412

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           E L+Q+R      K F++AD IR QL ++G  L D K   +G R TR
Sbjct: 413 EALIQKRQEARANKDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 456


>gi|309804596|ref|ZP_07698661.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|315653979|ref|ZP_07906895.1| cysteine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|308165988|gb|EFO68206.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|315488675|gb|EFU78321.1| cysteine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 470

 Score =  302 bits (773), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 179/477 (37%), Positives = 261/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L               KN  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    ++KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDD---TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|307708306|ref|ZP_07644773.1| cysteinyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615752|gb|EFN94958.1| cysteinyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 447

 Score =  302 bits (773), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 175/469 (37%), Positives = 254/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSAKSGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L       +
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKG----IIDPA 350
           +    V+R      HYR+PI+FT + + +AE  L       + P T T            
Sbjct: 285 NLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVNAQELQAFKDK 344

Query: 351 VLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
            ++A+  D N  + I  + ++A+  ++ N+D  +     A   + GI   +E L+     
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDAE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+Q+R      + F++AD+IR QL ++G  L D K   +G R TR
Sbjct: 402 -IEDLIQKRQEARANRDFATADHIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|257886072|ref|ZP_05665725.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821928|gb|EEV49058.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 470

 Score =  302 bits (773), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 263/493 (53%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTASELGITAPE------VADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQS-EAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L          K+ Q + S  + D A
Sbjct: 286 KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASDNLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLED--T 460

Query: 448 PDNGQRMTRWKQK 460
           P      TRW+++
Sbjct: 461 PQG----TRWRRE 469


>gi|46906472|ref|YP_012861.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47094540|ref|ZP_00232204.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47097639|ref|ZP_00235159.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|217965673|ref|YP_002351351.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|226222868|ref|YP_002756975.1| cysteinyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825717|ref|ZP_05230718.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853494|ref|ZP_05242842.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254900580|ref|ZP_05260504.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913469|ref|ZP_05263481.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254932458|ref|ZP_05265817.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254937950|ref|ZP_05269647.1| cysteinyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|254991761|ref|ZP_05273951.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255520317|ref|ZP_05387554.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|290892620|ref|ZP_06555613.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|300764636|ref|ZP_07074628.1| hypothetical protein LMHG_11118 [Listeria monocytogenes FSL N1-017]
 gi|61216246|sp|Q724H3|SYC_LISMF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781684|sp|B8DF15|SYC_LISMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|259511837|sp|C1KYH2|SYC_LISMC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46879736|gb|AAT03038.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47013983|gb|EAL04996.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47017086|gb|EAL07955.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217334943|gb|ACK40737.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|225875330|emb|CAS04027.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258606866|gb|EEW19474.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|258610559|gb|EEW23167.1| cysteinyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|290557929|gb|EFD91450.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293584014|gb|EFF96046.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293591477|gb|EFF99811.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|293594961|gb|EFG02722.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514743|gb|EFK41798.1| hypothetical protein LMHG_11118 [Listeria monocytogenes FSL N1-017]
 gi|307569778|emb|CAR82957.1| cysS [Listeria monocytogenes L99]
 gi|328467850|gb|EGF38890.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|332310650|gb|EGJ23745.1| Cysteinyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 471

 Score =  302 bits (773), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 174/476 (36%), Positives = 253/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKATVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI------- 346
             VIR  ML  HYR+PI             ++RL  A   +    QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +               + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|73748013|ref|YP_307252.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|109894897|sp|Q3ZWG4|SYC_DEHSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|73659729|emb|CAI82336.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 457

 Score =  302 bits (773), Expect = 9e-80,   Method: Compositional matrix adjust.
 Identities = 176/463 (38%), Positives = 245/463 (52%), Gaps = 40/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ +F  ++   ++MYVCG T     HIG+A   I FDV+ R L Y  G +
Sbjct: 1   MKIYNTLSGKLEKFVPLENGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYK-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQE--HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V Y++N TDIDDKII +A  +   PS         +  +N   F+     L      + 
Sbjct: 60  -VKYIQNFTDIDDKIIAKANAQGIEPST--------LAERNIGVFLDAMAALNITPADYY 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  +P++I ++  +I  G+AY     +      +  YG  S R +++   G RV   
Sbjct: 111 PRATQEVPKIIEMVSGLIEKGYAYAVGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEID 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIF
Sbjct: 171 EEKEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         +
Sbjct: 231 PHHENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALS-------RY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALY--- 356
            A  +R+ +L + YR P+ ++ + L  AE    +  QT+  K      + AV +  Y   
Sbjct: 284 SADALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETAVDTKAYRER 343

Query: 357 ------NDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIE--VCKEHL 401
                 ND NT +A+  +  L+R       E+ K+ D   +F   A ILG+   V +   
Sbjct: 344 FTQYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKT 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +++  IE L++ R  L   K++  AD IR  L++ G +LED
Sbjct: 404 GTDVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLED 446


>gi|224457829|ref|ZP_03666302.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
          Length = 459

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/467 (38%), Positives = 251/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN+++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           + A+ ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 344 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    + S  IEKL+ ER    K K +  AD IR QL+ +G ILED
Sbjct: 404 KQGDGADAS-EIEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILED 449


>gi|148998267|ref|ZP_01825736.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147755910|gb|EDK62954.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
          Length = 447

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/468 (38%), Positives = 250/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + ++ +  ++ N+D  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEEVLDAE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|332359942|gb|EGJ37756.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 450

 Score =  302 bits (773), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 177/472 (37%), Positives = 251/472 (53%), Gaps = 39/472 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFMPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
             PR  + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 QHPRVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEMSHNYAKLANKTLADLELGASGR 172

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSAL 355
                   V+R      HYR+PI+FT + + +A   L     T      G  D A L A 
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLKAF 344

Query: 356 YN--------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKN 404
            +        D N  + I  + +LA+     +    +  A A +L   GI   +E L  +
Sbjct: 345 LDKFTTAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEEVLEAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               IE+L++ER      + F++AD IR +L  +G  L D K   +G R TR
Sbjct: 405 ----IERLIEERQEARANRDFATADRIRDELADQGIKLLDTK---DGVRWTR 449


>gi|312796649|ref|YP_004029571.1| cysteinyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312168424|emb|CBW75427.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Burkholderia rhizoxinica
           HKI 454]
          Length = 483

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 176/469 (37%), Positives = 254/469 (54%), Gaps = 44/469 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  +    +RMYVCG TVYD+ H+G+ R M+VFD++ R LR   G 
Sbjct: 20  QLRLYNTLSRNKETFVPLHDGEVRMYVCGMTVYDYCHVGHGRLMVVFDMIQRWLRTL-GY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P H+P
Sbjct: 79  R-VTYVRNITDIDDKIIRRA------VDNGEPIRALTERFIAAMHEDEAALNIQRPDHEP 131

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT  I QM+ +I  +  +G+AY   + ++ +       YG  S + +++ + G RV + 
Sbjct: 132 RATQFISQMLGMIDALERNGYAYSGRDGDVNYSVRKFAAYGQLSGKSLEDLRAGERVTQN 191

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF+LWKRS   EP   GW+S WGRGRPGWHIECSAMS   LG+ FDIHGGG D
Sbjct: 192 DAKEDPLDFVLWKRSKDGEPPDTGWDSKWGRGRPGWHIECSAMSCALLGERFDIHGGGQD 251

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS      +   N W+HNGF+N++  KMSKS GNF T+ ++L+      
Sbjct: 252 LQFPHHENEIAQSEGVTG-QPFVNYWLHNGFVNVDNEKMSKSLGNFFTLRDVLQ------ 304

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------P 349
             +   VIR+ +L  HYR P++++   L +A   L++        +     +D       
Sbjct: 305 -RYDGEVIRMLILRAHYRSPLNYSDSHLDDARAALTRLYTALKNVAPDDRALDWSERHAA 363

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--EVCKEHLNKNI 405
           A  +A+ +D NT  A  AL  L  +  +  D  L       A +LG+     +E+L    
Sbjct: 364 AFRAAMNDDFNTPVAFAALFDLVTDLNRTGDPALARQLKGLAGVLGMLGRDPREYLQARA 423

Query: 406 ----------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                     +  I++ ++ R    + K ++ AD IR  L   G +LED
Sbjct: 424 PATDELAPLDAAQIDEQIEARAQAKRAKNYAEADRIRAALLEAGVVLED 472


>gi|54308291|ref|YP_129311.1| cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|61216519|sp|Q6LT67|SYC1_PHOPR RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|46912719|emb|CAG19509.1| putative cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 464

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 187/485 (38%), Positives = 264/485 (54%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L ++  EF+ I P  I MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTKQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +  KD   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGEMHKDFDALGMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A+N +++F+ S    YG  SR+ +D+ + G RV    
Sbjct: 114 ATEFIAEIIILCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCATG-SQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++   L +A   L +   +     +   A           ++
Sbjct: 286 AESVRYFLMSGHYRSQLNYSEDNLKQARSALERLYTSLRGLDLTAQAEGGEEFVTRFTAS 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLP--IFNAS---------AHILGI------E 395
           + +D NT  A   L  +ARE    K  + +   I  AS         A ILG+       
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKADETIANNIVQASALGARLRELADILGLLSQDPEA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +    ++    IE LVQ+RL     K +++AD  R +L +   ILED      G + T
Sbjct: 406 FLQGGAGQDDVAEIETLVQQRLDARAAKDWAAADAARDKLLAMKIILED------GPQGT 459

Query: 456 RWKQK 460
            W++K
Sbjct: 460 TWRRK 464


>gi|315612689|ref|ZP_07887601.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315276|gb|EFU63316.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 447

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/470 (38%), Positives = 257/470 (54%), Gaps = 43/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVADLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPDEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +D   L      
Sbjct: 286 -LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDTQELQAFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHIL---GIEVCKEHLNKNIS 406
             +A+  D N+ + I  + ++A+  ++ N+D   +  A A +L   GI   +E L+ +  
Sbjct: 345 FVAAMDEDFNSANGITVVFEMAKWINSGNYD-ASVKQALADMLEVFGIVFVEEVLDAD-- 401

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 --IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|291459364|ref|ZP_06598754.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417963|gb|EFE91682.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 469

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 182/479 (37%), Positives = 252/479 (52%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+  +  EF+ I+   IRMYVCGPTVY+  HIGNARPMIVFD   R + Y  G +
Sbjct: 1   MRIYNTMSGRKEEFKPIEEGKIRMYVCGPTVYNLIHIGNARPMIVFDTFRRYMEYR-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV N TD+DDKII++A +E  S         IT +   +  KD   L     +  PR
Sbjct: 60  -FNYVSNYTDVDDKIIQKANEEGTSC------QRITERYIGEVEKDMKALNIEPASAHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI LI  ++  G+AY +++  + ++T +  NYG  S + IDE + G R   V 
Sbjct: 113 ATEEISGMISLIAELVEKGYAYASDDGTVYYNTKAFRNYGELSHKNIDELQSGLRELKVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++PADF+LWK     EP W SPW  GRPGWH EC  M+  Y G   DIH GG DL
Sbjct: 173 GEEKKRSPADFVLWKPKKEGEPYWNSPWSEGRPGWHTECCVMAPKYCGGRLDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ   A   E+ AN W+HN F+N++ +KMSKS GNF+T+ +++       +
Sbjct: 233 IFPHHENEIAQYEAA-HGERFANYWMHNAFINIDHKKMSKSLGNFLTVRDVI-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTS 343
            W   V+R  ML  HYR P++F+                 VQRL E    LS        
Sbjct: 285 RWDPMVLRFYMLSAHYRNPLNFSAELMDSAKQSLERILTAVQRLRELSGRLSGEELLPGE 344

Query: 344 KGIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
           + + + A          + +DLNT  AI A+ +L R +  +            +L     
Sbjct: 345 EKVREAAEEQRRNFNERMDDDLNTADAITAVFELVRIANSSVSEQSSAAICRYMLDTIVT 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              +LGI    E   + +   +E+L++ER    + K F  AD IR +L S G  L+D +
Sbjct: 405 LLSVLGIRT--ERKEEKLDREVEELIEERQKAREKKDFKRADEIRDRLLSMGISLKDTR 461


>gi|18311409|ref|NP_563343.1| cysteinyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168214716|ref|ZP_02640341.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168217920|ref|ZP_02643545.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182626995|ref|ZP_02954725.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|21264002|sp|Q8XHQ5|SYC_CLOPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|18146093|dbj|BAB82133.1| cysteine-tRNA ligase [Clostridium perfringens str. 13]
 gi|170713805|gb|EDT25987.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907665|gb|EDT70289.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182380037|gb|EDT77516.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 466

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 174/473 (36%), Positives = 247/473 (52%), Gaps = 51/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y  G K
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++        I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILE-------RYDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP-----------AVL 352
            VIR  ML  HYR+ ++F+   L  A+  + + +      + +ID            A L
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 353 SALY-----------NDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
            +L            +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+   ++    N+   IE L+ +R    K + F+ AD IR +L+ +G +LED
Sbjct: 406 LGM--FQKSTKGNLEEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLED 456


>gi|110799706|ref|YP_697116.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168211251|ref|ZP_02636876.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|122958668|sp|Q0TMM4|SYC_CLOP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110674353|gb|ABG83340.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170710753|gb|EDT22935.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 466

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 174/473 (36%), Positives = 247/473 (52%), Gaps = 51/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y  G K
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++        I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILE-------RYDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP-----------AVL 352
            VIR  ML  HYR+ ++F+   L  A+  + + +      + +ID            A L
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 353 SALY-----------NDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
            +L            +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+   ++    N+   IE L+ +R    K + F+ AD IR +L+ +G +LED
Sbjct: 406 LGM--FQKSTKGNLEEEIEALIAKRQQARKDRDFTLADKIRDELKDRGIVLED 456


>gi|309808476|ref|ZP_07702375.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168304|gb|EFO70423.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 470

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/477 (37%), Positives = 261/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L               KN  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEIENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 461

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LNFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+N +++F+      YG  S++ +++ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDIDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L+        + 
Sbjct: 234 HHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLQ-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPA--------VLSA 354
           A  +R  ++  HYR  ++++   L +A   L +   +     +   PA          +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFSTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE-------VCKE 399
           + +D NT  A   L ++ARE          K   L  +    A I+GI        +  +
Sbjct: 346 MNDDFNTPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQGD 405

Query: 400 HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               +  +A IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 406 AAGNDDEVAEIEGLIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|315274656|ref|ZP_07869496.1| cysteinyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615713|gb|EFR89001.1| cysteinyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 471

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 173/476 (36%), Positives = 254/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKATVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQMINTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG+  DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGETIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI------- 346
             VIR  ML  HYR+PI      L +A+  L +            QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +               + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|327472399|gb|EGF17830.1| cysteine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 447

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 173/468 (36%), Positives = 249/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKKEGIT-PKE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  +++++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VVEFMDDIIRFVEDLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  +N W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFSNYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN-- 357
               V+R      HYR+PI+FT + + +A   L     T      G  D A L A  +  
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQTDSAQLQAFLDKF 345

Query: 358 ------DLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
                 D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|289432010|ref|YP_003461883.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945730|gb|ADC73427.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 485

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 176/463 (38%), Positives = 245/463 (52%), Gaps = 40/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ +F  ++   ++MYVCG T     HIG+A   I FDV+ R L Y  G +
Sbjct: 1   MKIYNTLSGKLEKFVPLENGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYK-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQE--HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V Y++N TDIDDKII +A  +   PS         +  +N   F+     L      + 
Sbjct: 60  -VKYIQNFTDIDDKIIAKANAQGIEPST--------LAERNIGVFLDAMAALNITPADYY 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  +P++I ++  +I  G+AY     +      +  YG  S R +++   G RV   
Sbjct: 111 PRATQEVPKIIEMVSGLIEKGYAYAVGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEID 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIF
Sbjct: 171 EEKEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         +
Sbjct: 231 PHHENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALS-------RY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALY--- 356
            A  +R+ +L + YR P+ ++ + L  AE    +  QT+  K      + AV +  Y   
Sbjct: 284 SADALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETAVDTKAYRER 343

Query: 357 ------NDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIE--VCKEHL 401
                 ND NT +A+  +  L+R       E+ K+ D   +F   A ILG+   V +   
Sbjct: 344 FTQYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKT 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +++  IE L++ R  L   K++  AD IR  L++ G +LED
Sbjct: 404 GTDVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLED 446


>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 461

 Score =  301 bits (772), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 159/383 (41%), Positives = 227/383 (59%), Gaps = 32/383 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L ++  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCEALTERLIGEMYADFDALNMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ +    YG  SR+ +++ + G RV  + 
Sbjct: 114 ATQYIAEIIALVERLIDRGFAYVASNGDVLFEVAKFDEYGKLSRQDLEQLQAGARVDVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKKSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----------- 352
           A  +R  ++  HYR  ++++ + L +A   + +     TS   +D +V            
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASMER---LYTSLRGLDTSVAAEGGEAFVERF 342

Query: 353 -SALYNDLNTVSAIQALHKLARE 374
            +A+ +D NT  A   L  +ARE
Sbjct: 343 KAAMDDDFNTPEAYSVLFDMARE 365


>gi|302535869|ref|ZP_07288211.1| cysteinyl-tRNA synthetase [Streptomyces sp. C]
 gi|302444764|gb|EFL16580.1| cysteinyl-tRNA synthetase [Streptomyces sp. C]
          Length = 466

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 174/476 (36%), Positives = 260/476 (54%), Gaps = 60/476 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  ++   + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFVPLEQGCVSIYLCGATVQAAPHIGHIRSGLNFDMMRRWFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT+VRN+TDIDDKII + A Q  P   I         +N + F    T L CL PT++P
Sbjct: 62  -VTFVRNVTDIDDKIIAKSAEQRRPWWSIG-------YENERAFNDGYTALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
           RAT H+ +M+ +++ +I  GHAYE+   + FD  S P Y S SR+++D      R PE  
Sbjct: 114 RATGHVTEMVEMMRGLIERGHAYESEGNVYFDVKSFPGYLSLSRQELDN----IRQPEST 169

Query: 182 -KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGGLDL
Sbjct: 170 GETGKRDPRDFAMWKSVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEAFDIHGGGLDL 229

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ+      +  AN W+HN ++ + G KMSKS GN + ++E++       +
Sbjct: 230 IFPHHENEIAQAKAFG--DAFANYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------K 280

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-----------LLSKWPQTSTSKGIIDP 349
            W   V+R  +   HYR  I+++ + L EAE            ++ K      +   + P
Sbjct: 281 QWRPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFYQRVIEKAGGPVEAAAEVPP 340

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-------KNHDL--LPIFNASAHILGIEVCKEH 400
           A   A+ +DL    A+  +H   R+         K+  +  L    A   +LG++    H
Sbjct: 341 AFAEAMDDDLGVPQALAIVHTTVRQGNSALAADDKDEAIARLAEVRAMLGVLGLDPLDPH 400

Query: 401 L------NKNISIAIEKLVQERLILLK------MKKFSSADYIRKQLESKGFILED 444
                   +++  A++ LV  RL+L +       K +++AD IR QL   G ++ED
Sbjct: 401 WAGEADRGEDLHGAVDTLV--RLVLEQRESARARKDWATADAIRDQLNQSGLVIED 454


>gi|149183935|ref|ZP_01862320.1| cysteinyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848358|gb|EDL62623.1| cysteinyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 465

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 261/484 (53%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+NTL RK  EF+ ++   ++MYVCGPTVY++ HIGNARP IVFD ++R   Y   + 
Sbjct: 3   IKIFNTLTRKKEEFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVHRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +    +P       I  +  + + +DT  L C      PR
Sbjct: 62  -VNFVSNFTDVDDKLIKAANELGEDVPA------IAERFIEAYHEDTEALGCQRADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ +I  G+AYE+  ++ + T     YG  S + ID+ K+G R+     
Sbjct: 115 VTESMDIIIDFIEALIDKGYAYESQGDVYYRTRKFEGYGKLSHQSIDDLKVGARIEAGDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  WESPWG+GRPGWHIECSAM+  YLG+  DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKAAKEGEIFWESPWGQGRPGWHIECSAMAKKYLGETIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +  A  W+HNG++N++  KMSKS GNF+ ++++++ +         
Sbjct: 235 HENEIAQSEALNE-KPFARYWMHNGYINIDNEKMSKSLGNFVLVHDIIKEQ-------DP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID-------- 348
            V+R  ML  HYR PI++ ++ L  A+  L +   +          S  + D        
Sbjct: 287 QVLRFFMLSVHYRHPINYNLELLENAKSGLDRLKTSYENLKHRREVSAELTDNNEEWLEK 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAH---ILGIE 395
                   +  + +D NT + I  L +L+R++      KN  +  I   S H      + 
Sbjct: 347 IASLKNQFIEEMDDDFNTANGISVLFELSRQANYYLMEKNTSITVIDAFSQHFKEFFEVL 406

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             K    + +   IE+++ +R+   K + F  AD +R +L++   ILED        + T
Sbjct: 407 GLKLEEAELLDEEIEEMINQRIQARKDRNFQLADELRDKLKAMNIILED------TAQGT 460

Query: 456 RWKQ 459
           RWK+
Sbjct: 461 RWKR 464


>gi|322374189|ref|ZP_08048722.1| cysteine--tRNA ligase [Streptococcus sp. C150]
 gi|321276894|gb|EFX53966.1| cysteine--tRNA ligase [Streptococcus sp. C150]
          Length = 447

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 171/469 (36%), Positives = 255/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMARSLRDFVPLTENVVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +   S         ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANEAGIST------KELSDKFIAAFMEDTAQLGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             N++ ++I  +  ++  G AY +  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TARKENPLDFALWKAAKEGEISWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVL------ 352
                V+R  +    YR+PI+FT + + +AE+ L     T +    G +D A L      
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTGQVDQAELQTYLDA 344

Query: 353 --SALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
              A+ +D NT + +  L  +A+     H    +   F     + GI   +E L+++   
Sbjct: 345 FQEAMDDDFNTANGVTVLFDMAKWINSGHYDQTVKDAFEKVLQVFGIVFKEEVLDED--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IEKL++ER      K F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 -IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|237653707|ref|YP_002890021.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237624954|gb|ACR01644.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 461

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 165/389 (42%), Positives = 222/389 (57%), Gaps = 31/389 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F  I+P  +RMYVCG TVYDF H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LSIYNTLSRSKEAFTPIEPGKVRMYVCGMTVYDFCHLGHARVMVVFDMVARWLRASGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        ++I  +T +      +D   L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAQEN------GESIRQLTDRFIAAMHEDADALGVLRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++ QM  LI  +   G AY A N ++ +       YG  S + +DE + G RV    
Sbjct: 114 ATDYVAQMQSLISRLEQKGLAYVAGNRDVCYAVRKFDGYGKLSGKSLDELRAGERVDVAQ 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   EPG   W SPWG GRPGWHIECSAMSS  LG  FDIHGGG+DL
Sbjct: 174 DKNDPLDFVLWKHAKVEEPGEVKWASPWGEGRPGWHIECSAMSSDLLGDHFDIHGGGMDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+L+       
Sbjct: 234 QFPHHENEIAQSEGA-HGHAFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVLQ------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            +   V+R  +L  HYR  ++++   L +A   L++      +  +    V+        
Sbjct: 286 KYDPEVVRFFILRAHYRSALNYSDAHLEDARNALTRLYTALKNVPVAGEPVVDWSEPFAQ 345

Query: 353 ---SALYNDLNTVSAIQALHKLARESTKN 378
              +A+ +D NT  A+  L +LA E  ++
Sbjct: 346 RLRAAMDDDFNTAEAVAVLFELANEVNRS 374


>gi|56708635|ref|YP_170531.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110671107|ref|YP_667664.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254371268|ref|ZP_04987270.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875501|ref|ZP_05248211.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|61216126|sp|Q5NEL1|SYC_FRATT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123063359|sp|Q14G14|SYC_FRAT1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56605127|emb|CAG46249.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321440|emb|CAL09632.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569508|gb|EDN35162.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841500|gb|EET19936.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159873|gb|ADA79264.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 464

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/467 (38%), Positives = 251/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN+++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 348

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           + A+ ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 349 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 408

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    + S  IEKL+ ER    K K +  AD IR QL+ +G ILED
Sbjct: 409 KQGDGADAS-EIEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILED 454


>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 466

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 171/489 (34%), Positives = 262/489 (53%), Gaps = 57/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y  G K
Sbjct: 1   MKLFNTMTRQKEEFKPIKDGQVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E      N  +  +  +  Q++ KD   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIQEYYKDADGLNIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++ ++I  ++++I  G+AYE N ++ F+T     YG  S + +D+ + G R+     
Sbjct: 113 ATEYMDEIIEFVRDLIDKGYAYEVNGDVYFNTKQFKEYGKLSGQNLDDLQAGARISIDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W+ PWG+GRPGWHIECS M+   LG   DIH GG DL+FPH
Sbjct: 173 KKDPMDFAIWKSEKPGEPSWDCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A+ W+H+ +LN++ +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARNGKAFAHYWMHSAYLNIDNKKMSKSLNNFFTTREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------------------EILLSKWPQTS---- 341
            V+RL ML  HYR P++F+ + L  A                   E+ + K  +      
Sbjct: 285 EVVRLFMLSAHYRTPLNFSNELLQSAKASNERLYNAIGNLERLLDEVKIDKITEDEKEYV 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
            +        +  + +D NT  AI  +  L ++   N +           L +       
Sbjct: 345 KNLNSYKEKYIEKMDDDFNTADAIAVIFDLVKDINTNINTESSKELVEYSLELIRELGKP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++    +++  IEKL+++R    K + ++ AD IR  L+++G +LED   P   
Sbjct: 405 LGI--LQKSTILDLNTEIEKLIEQRQQARKDRDWALADKIRDDLKARGIVLED--TP--- 457

Query: 452 QRMTRWKQK 460
            +  RWK++
Sbjct: 458 -QGVRWKKE 465


>gi|270307505|ref|YP_003329563.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153397|gb|ACZ61235.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 457

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 180/479 (37%), Positives = 249/479 (51%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF  ++   ++MYVCG T     HIG+A   I FDV+ R L Y  G +
Sbjct: 1   MKIYNTLSGKLEEFVPLEDGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLSYK-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQE--HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V Y++N TDIDDKII +A  +   PS         +  +N   F+     L      + 
Sbjct: 60  -VKYIQNFTDIDDKIIAKANAQGIEPST--------LAERNIGVFLDAMAALNITPADYY 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  +P++I ++  +I  G+AYEA   +      +  YG  S R +++   G RV   
Sbjct: 111 PRATQEVPKIIEMVSGLIEKGYAYEAGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEID 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIF
Sbjct: 171 EEKEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQVDIHGGGQDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         +
Sbjct: 231 PHHENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALS-------RY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSAL 355
            A  +R+ +L + YR P+ ++ + L  AE    +  QT+       +++  +D       
Sbjct: 284 SADALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARQDNPQSNETNVDVKTYRER 343

Query: 356 Y-----NDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILG--IEVCKEHL 401
           +     ND NT +A+  +  L+R       E  K+ D   +F   A ILG  +++ +   
Sbjct: 344 FTQYMDNDFNTSAALATIFDLSRELNRIEAEGGKSTDGQKLFKELADILGLSLKIAEPET 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +    IE L++ R  L   K++  AD IR  L+S G +LED          T WK K
Sbjct: 404 GTDAVPFIELLIELRKDLRLAKQYQLADKIRTSLDSAGILLEDSAGG------TVWKAK 456


>gi|94310030|ref|YP_583240.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353882|gb|ABF07971.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 491

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 178/466 (38%), Positives = 258/466 (55%), Gaps = 40/466 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++ IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    
Sbjct: 31  QQLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGY 90

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+NITDIDDKII RA +        + I  +T++  Q   +D T L  + P ++
Sbjct: 91  D--VTYVQNITDIDDKIIRRAAEN------GETIGQLTTRFIQYMHEDATALGVIRPDYE 142

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I+ +   G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 143 PRATEYVPQMLNIIEKLEAKGLAYQATDGDVNYSVRKFPGYGKLSGKSLEDLRAGERVNA 202

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W+S WG GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 203 NDAKQDPLDFVLWKSAKATEPPESKWDSKWGSGRPGWHIECSAMSCTLLGEHFDIHGGGA 262

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A       N+W+HNGF+ +   KMSKS GNF TI ++L      
Sbjct: 263 DLQFPHHENEIAQSEGASG-RPFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVL------ 315

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------ 348
            + + A V+R  +L  HYR P++++   L +A   L++      +T      +D      
Sbjct: 316 -KEYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKETQPGGCAVDWEESHA 374

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIE-------VCKE 399
                A+ +D NT  A+  L  LA E  +   +       A    LG+        +   
Sbjct: 375 KRFAEAMNDDFNTPIAMSVLFDLASEVNRTGSVAAAHQLKALGGTLGLLERDPHTFLQGG 434

Query: 400 HLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           H+  ++S   IE  +  R      + F+ AD IR +L   G +LED
Sbjct: 435 HVAGSLSGEQIEAQIAARRAAKAARNFAEADRIRAELLEAGVVLED 480


>gi|56961911|ref|YP_173633.1| cysteinyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|61216140|sp|Q5WLT3|SYC_BACSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56908145|dbj|BAD62672.1| cysteinyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 466

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 174/486 (35%), Positives = 255/486 (52%), Gaps = 54/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+L  K   F  I+   ++MY CGPTVY++ HIGNARP IV+D++ R L Y   + 
Sbjct: 2   IKLFNSLTNKKEPFVPIEEGKVKMYCCGPTVYNYIHIGNARPPIVYDMVRRYLTYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V N TD+DDKII  A +      + + ++ +  +  + +  DT  L        PR
Sbjct: 61  -VTFVSNFTDVDDKIIRAANE------LGEEVAAVAERFIKAYYADTCALNVKEADLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I ++   G AYEA  ++ F T     YG  S + +D+ + G R+     
Sbjct: 114 VTETMDDIIAFIADLEKKGFAYEAGGDVYFRTRKFNGYGKLSGQALDDLQSGARIEVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P E  W SPWG GRPGWHIECSAM    LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFVLWKAAKPNEISWSSPWGEGRPGWHIECSAMIKKSLGDTIDIHAGGKDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +K AN W+HNGF+N+   KMSKS GNF+  +++++        +  
Sbjct: 234 HENEIAQSEALTG-KKLANYWMHNGFVNINNEKMSKSLGNFVLAHDIIQ-------QYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPAVLSA-------- 354
            V+R  ML  HYR PI+F+ + L  AE  L +   T  +    + + A + A        
Sbjct: 286 EVVRFFMLTAHYRTPINFSDELLKGAEAGLERLKNTVANLQHRLAETADMGAEEEWLEKI 345

Query: 355 ----------LYNDLNTVSAIQALHKLARE---------STKN--HDLLPIFNASAHILG 393
                     + +D N+ +AI  L  LA+E         ++K   +  L +F     +LG
Sbjct: 346 AGAKQRFIEEMDDDFNSANAISVLFDLAKEANIYMSEAQTSKKVLNAFLELFAEFGEVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +   ++   + +   IE L++ER +  K + F+ AD IR  L+ K  +LED   P     
Sbjct: 406 VSFTQQE-EELLDAEIEALIEERNVARKERNFARADEIRDLLKEKNIVLED--TPQG--- 459

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 460 -VRWKR 464


>gi|126654401|ref|ZP_01726146.1| cysteinyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589151|gb|EAZ83335.1| cysteinyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 466

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 177/488 (36%), Positives = 261/488 (53%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R  +Y   + 
Sbjct: 3   IQIFNSLSRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII+ A +      + + +  +T +    + +D T L C      PR
Sbjct: 62  -VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +I  IQ +I  G+AYE+  ++ + T     YG  S + +D+ K+G R+     
Sbjct: 115 VTEHMTDIIQFIQILIEKGYAYESAGDVYYRTRKFNGYGKLSHQSVDDLKIGARIEAGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +  DF LWK + P E  WESPWG GRPGWHIECS M+  +LG   DIH GG DL FPH
Sbjct: 175 KDDALDFALWKAAKPGEIFWESPWGNGRPGWHIECSVMAREHLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS   +  +KT A  W+HNG++N++  KMSKS GNFI +N++        +   
Sbjct: 235 HENEIAQSEAHN--DKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIR-------KQID 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             V+R  ML  HYR PI+F           ++R+  A   +     T+ S G      L+
Sbjct: 286 PQVLRFFMLSVHYRHPINFAKDLVEAAAAGLERIRTAYNNVKHRLTTTVSLGDHSDEWLN 345

Query: 354 -----------ALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHI 391
                      A+ +D NT + I  L +LAR       E+     +L      F     +
Sbjct: 346 KITEQKAQFEEAMDDDFNTANGISVLFELARIANIYLNETNTCKKVLETFIETFEVLGDV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI+  K    + +   I+ L+QER+   K + F+ +D IR  L+++G ILED +     
Sbjct: 406 LGIKFAK--EEELLDEEIDALLQERVEARKNRDFARSDEIRDHLQAQGIILEDTRQG--- 460

Query: 452 QRMTRWKQ 459
              TRWK+
Sbjct: 461 ---TRWKR 465


>gi|254388528|ref|ZP_05003762.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294814057|ref|ZP_06772700.1| Cysteinyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
 gi|326442461|ref|ZP_08217195.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197702249|gb|EDY48061.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326656|gb|EFG08299.1| Cysteinyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
          Length = 466

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 172/488 (35%), Positives = 257/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   E 
Sbjct: 3   IRLYDTSARQIRDFTPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII++ A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIIKKSAEQGRPWWSIG-------YENERAFNAGYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +M+ +++ +I  GHAYEA   + FD  S P Y   S + +++ +      E  
Sbjct: 114 RATGHITEMVEMMRGLIERGHAYEAEGNVYFDVRSFPGYLQLSNQDLEDLRQPAGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+FP
Sbjct: 173 GKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQAKAFG--DEFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHWK 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--GIIDPAV------L 352
             V+R  +   HYR  I+++ + L EAE   ++   + Q    K  G ++PA        
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEEALREAESAFARIVGFMQRVCEKAGGAVEPAAEVPLAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEH--- 400
            A+ +DL    A+  +H   R+                L    A   +LG++    H   
Sbjct: 344 EAMDDDLGVPQALAVIHTTVRQGNSALAADDKETAAARLAEVRAMLGVLGLDPFDPHWAG 403

Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                  L+  +   +  ++Q+R      K +++AD IR QL+  G ++ED      G  
Sbjct: 404 EAESGEDLHGAVDTLVRLVLQQREAARGRKDWATADAIRDQLQQSGLVIED------GPE 457

Query: 454 MTRWKQKP 461
            TRW   P
Sbjct: 458 GTRWSLGP 465


>gi|147668707|ref|YP_001213525.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|187629809|sp|A5FP90|SYC_DEHSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146269655|gb|ABQ16647.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 457

 Score =  301 bits (771), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 175/463 (37%), Positives = 244/463 (52%), Gaps = 40/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF  ++   ++MYVCG T     HIG+A   I FDV+ R L Y  G +
Sbjct: 1   MKIYNTLSGKLEEFVPLENDKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYK-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQE--HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V Y++N TDIDDKII +A  +   PS         +  +N   F+     L      + 
Sbjct: 60  -VKYIQNFTDIDDKIIAKANAQGIEPST--------LAERNIGVFLDAMAALNITPADYY 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  +P++I ++  +I  G+AY  +  +      +  YG  S R +++   G RV   
Sbjct: 111 PRATQEVPKIIEIVSGLIDKGYAYAVDGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEID 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIF
Sbjct: 171 EEKEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         +
Sbjct: 231 PHHENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALS-------RY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPAVLSAL 355
            A  +R+ +L + YR P+ ++ + L  AE    +  QT+  K         +D       
Sbjct: 284 SADALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETTVDTKAYRER 343

Query: 356 Y-----NDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIE--VCKEHL 401
           +     ND NT +A+  +  L+R       E+ K+ D   +F   A ILG+   V +   
Sbjct: 344 FTQYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKT 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +++  IE L++ R  L   K++  AD IR  L++ G +LED
Sbjct: 404 GTDVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLED 446


>gi|322381145|ref|ZP_08055148.1| cysteinyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154721|gb|EFX46992.1| cysteinyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 461

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 177/485 (36%), Positives = 257/485 (52%), Gaps = 55/485 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++NT+ R+  EF+ + P  + MYVCGPTVY++ HIGN RP I FDV++R L Y   +  V
Sbjct: 1   MFNTMTREKEEFKPVVPGKVSMYVCGPTVYNYIHIGNGRPAIFFDVVHRYLTYLGYD--V 58

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYV N TD+DDK+I +A +        + +  +  +  + +++D   L        PR T
Sbjct: 59  TYVVNFTDVDDKLIRKAEE------TGETVKELADRFIEAYLEDMEALGIRKADINPRVT 112

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            ++ ++I  I++++  G+AYE   ++ + T    +YG  S + +DE + G R+     K+
Sbjct: 113 ENMDEIISFIRSLVDKGYAYENGGDVFYRTQKFADYGKLSHQNLDELQYGIRIEVDERKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF+LWK + P E  W SPWG GRPGWHIECSA+   YLG+  DIHGGG+DL FPHHE
Sbjct: 173 NPQDFVLWKAAKPGEVYWSSPWGNGRPGWHIECSALVHKYLGETIDIHGGGVDLTFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            EIAQ+  A   +  A  W+HN FLN++  KMSKS GN + + E+L+  K         V
Sbjct: 233 CEIAQT-EALTCKPMAKYWLHNAFLNIDNEKMSKSLGNGVLVREILKRVK-------PQV 284

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVL----- 352
           +RL M+M HYR  I+F    L +A   L +   + T+         +G  D  V      
Sbjct: 285 LRLFMMMAHYRNQINFNSDGLEQAANGLERIMNSVTNLKHRLKIAQEGPADEQVKNRIQA 344

Query: 353 ------SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIE 395
                 + + +D NT  AI A+ +L  E+                LL  F +   +LGI 
Sbjct: 345 IKAQFEAKMNDDFNTPDAITAVFELVSEANNTLKEERVNVSTLEMLLDQFKSFDTVLGIL 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +E     +   IEKL+ ER    + K ++ AD IR  L  KG +LED   P       
Sbjct: 405 EPEE--TDLMDEEIEKLIAERTEARRAKNWARADEIRDILTEKGILLED--TPQG----I 456

Query: 456 RWKQK 460
           RW+QK
Sbjct: 457 RWRQK 461


>gi|312874864|ref|ZP_07734883.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|325912411|ref|ZP_08174806.1| cysteine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|311089609|gb|EFQ48034.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|325475753|gb|EGC78924.1| cysteine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 470

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 178/477 (37%), Positives = 262/477 (54%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + I+E + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGRLSGQNIEELEEGASQHVSVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQT 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRNIQERLSEKNDVSDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST----------KN-HDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L+              KN  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELSLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++  E  N +    ++KLV +R +  + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDD---TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED 458


>gi|110803392|ref|YP_699686.1| cysteinyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|122956489|sp|Q0SQC1|SYC_CLOPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110683893|gb|ABG87263.1| cysteine--tRNA ligase [Clostridium perfringens SM101]
          Length = 466

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 178/488 (36%), Positives = 253/488 (51%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y  G K
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++        I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEEGITV------KKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILE-------RYDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP-----------AVL 352
            VIR  ML  HYR+ ++F+   L  A+  + + +      + +ID            A L
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 353 SALY-----------NDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
            +L            +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   ++    N+   IE L+ +R    K + F+ AD IR +L+ +G +LED   P   
Sbjct: 406 LGM--FQKSTKGNLEEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLED--TP--- 458

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 459 -QGVRWKR 465


>gi|312868029|ref|ZP_07728233.1| cysteine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096433|gb|EFQ54673.1| cysteine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 447

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 177/466 (37%), Positives = 248/466 (53%), Gaps = 35/466 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKTID---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLS----- 353
                V+R      HYR+PI+FT + + +AE  L     T      G +DPA L      
Sbjct: 288 ---GQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLQGFVDK 344

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
              A+  D+N  + I  + +LA+     H    + +A   +L        + + +   IE
Sbjct: 345 FIVAMDEDINAANGITVVFELAKWINSGHYNQDVKDALTKML-EVFGVVFVEEVLDADIE 403

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            L+ ER      K F+ AD IR +L ++G  L D K    G R TR
Sbjct: 404 ALIAERQEARAKKDFARADAIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|239942334|ref|ZP_04694271.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239988799|ref|ZP_04709463.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291445792|ref|ZP_06585182.1| cysteinyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
 gi|291348739|gb|EFE75643.1| cysteinyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
          Length = 466

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 168/471 (35%), Positives = 251/471 (53%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++++T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLHDTSARQIRDFVPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIIAKSAEQGRPWWSIG-------YENERAFNDGYDVLGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+P+MI +++ +I  GHAYEA+  + FD  S+P Y   S +++D+ +  +   E  
Sbjct: 114 RATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLELSNQELDDLRQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIFP
Sbjct: 173 GKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  AN W+HNG++ L G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQAKAYG--DTFANYWVHNGWVTLAGEKMSKSLGNSVLVSEMV-------KHWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----------KWPQTSTSKGIIDPAVL 352
             V+R  +   HYR  I+++ + L EAE   +           K  +T      + PA  
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKVGETVAPAADVPPAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK----- 398
            A+  DL    A+  +H   R+                L    A   +LG++        
Sbjct: 344 EAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAAARLAEVRAMLGVLGLDPLDPQWAG 403

Query: 399 -----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                E L+  +   +  ++ +R      K +++AD IR QL   G ++ED
Sbjct: 404 EGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIED 454


>gi|126660010|ref|ZP_01731132.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618688|gb|EAZ89435.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 482

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 180/485 (37%), Positives = 257/485 (52%), Gaps = 61/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL RK   F  I+   ++MY CG TVYD+ H+G+AR  I++DV+ R L+++    
Sbjct: 3   LTVYNTLTRKKEPFTTIEEGKVKMYCCGITVYDYCHLGHARTCIIWDVVRRYLQWH--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY++N TDIDDKI+ RAR+E  ++        ++ +  + + +D  RL        PR
Sbjct: 61  NVTYIQNFTDIDDKILNRARKEKTTM------EAVSERFIEAYFEDMERLGVQKADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  L+  +   G+AY +N ++ ++      YG  S RK+++ + G   RV   
Sbjct: 115 ATHTLNGIQRLVSELEAKGYAYASNGDVYYNVHQFKPYGKLSGRKLEDLQAGASGRVNLE 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   KK+PADF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DSEASKKKDPADFAVWKSAKPGEPAWDSPWGKGRPGWHIECSAMVRERLGETIDIHVGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELLE     
Sbjct: 235 DLIFPHHENEIAQSEAATG-QPLARYWLHNGMVKVGGEKMSKSLGNFTTIRELLE----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWPQTSTSKGIIDPA 350
                   +RL +L  HYR+P+DFT + L  A        E LL  +   +T     D  
Sbjct: 289 --KIDPMAVRLFILQAHYRKPVDFTDEALAAATNGWQTLSEGLLFGFQHGTTLGFKGDML 346

Query: 351 VL---------SALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------I 384
            L         +A+ +D N    +  L ++A+E  K  +LL                   
Sbjct: 347 ELLPKFVKRFNNAVDDDFNFAGGLAVLFEIAKELRKEGNLLVHQGNTETNSEILEKQWYT 406

Query: 385 FNASAHILGIEVCKEHLNKNIS-----IAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
               A +LG+E  +  L    S      AIE L+++R    K K F+ +D IR +L+ +G
Sbjct: 407 LRTLASVLGLEADRNQLQSEPSDGLNDTAIETLIEQRKEARKNKNFAESDRIRDELKEQG 466

Query: 440 FILED 444
            IL D
Sbjct: 467 IILVD 471


>gi|116512729|ref|YP_811636.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123125354|sp|Q02WZ9|SYC_LACLS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116108383|gb|ABJ73523.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 448

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 169/462 (36%), Positives = 256/462 (55%), Gaps = 40/462 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A  E+ S         ++ +    F +DT  L     +  P+
Sbjct: 60  -VEYISNFTDVDDKIIKAAVSENISTKE------LSERYIAAFYEDTDLLNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  I  MI  IQ ++   +AY +  ++ F  +   NY   + + + +   G   R  E+
Sbjct: 113 ATEFIEAMIDFIQELLDKDYAYISEGDVYFRVAKSKNYAKLANKNLADLLAGASGRTDEE 172

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            + K++PADF LWK     E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TNLKESPADFALWKSVKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +K  N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQS-EAKTGQKFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVV------ 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYND 358
               ++R  +  THYR P++FT   LTEAE  + K          +   + + L+   ND
Sbjct: 286 -DPQILRFFLATTHYRRPLNFTDDALTEAENNIKKIENAYRHLDDQAESNLSALTTFRND 344

Query: 359 LNTVSAIQALHKLARESTKNHDLL-------------PIFNASAHILGIEVCKEHLNKNI 405
              V+A+     +A   T  +D +               F+    ILGI   K  + +++
Sbjct: 345 F--VAAMDEDFNIANGMTVFYDFVSWVNKGNGGAEVKAFFDQVLEILGI---KFEIEQSL 399

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              IE +++ R +  +++ F+ +D IR  L+++G +LED K+
Sbjct: 400 DSEIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKD 441


>gi|69245493|ref|ZP_00603457.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879803|ref|ZP_05659456.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882529|ref|ZP_05662182.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891644|ref|ZP_05671297.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894121|ref|ZP_05673774.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614229|ref|ZP_05711999.1| cysteinyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559477|ref|ZP_05831658.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206628|ref|ZP_05921326.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289564989|ref|ZP_06445443.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293564124|ref|ZP_06678530.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293570060|ref|ZP_06681140.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614954|ref|ZP_06694845.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294618278|ref|ZP_06697860.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294623060|ref|ZP_06701947.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940063|ref|ZP_07847246.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942530|ref|ZP_07849369.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949364|ref|ZP_07852705.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952824|ref|ZP_07855796.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993743|ref|ZP_07859088.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314994808|ref|ZP_07859940.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195744|gb|EAN10181.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257814031|gb|EEV42789.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818187|gb|EEV45515.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257828004|gb|EEV54630.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830500|gb|EEV57107.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074576|gb|EEW62897.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079121|gb|EEW66814.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163196|gb|EFD11042.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587432|gb|EFF19316.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592240|gb|EFF23858.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291595494|gb|EFF26805.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291597533|gb|EFF28697.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604042|gb|EFF33570.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590992|gb|EFR69837.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591843|gb|EFR70688.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595058|gb|EFR73903.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598751|gb|EFR77596.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640663|gb|EFS05243.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313644195|gb|EFS08775.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 470

 Score =  301 bits (771), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 183/493 (37%), Positives = 263/493 (53%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANELGITAPE------VADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQS-EAKTGKKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L          K+ Q + S+ + D A
Sbjct: 286 KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F  +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFVRSDEIRDLLKEKGILLED--T 460

Query: 448 PDNGQRMTRWKQK 460
           P      TRW+++
Sbjct: 461 PQG----TRWRRE 469


>gi|324992446|gb|EGC24367.1| cysteine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|327462791|gb|EGF09113.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 447

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 173/468 (36%), Positives = 252/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVCRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVL--- 352
               V+R      HYR+PI+FT + + +A   L       + P T  ++     A L   
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQAESAQLQAFLDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTSEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|258509321|ref|YP_003172072.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257149248|emb|CAR88221.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650602|dbj|BAI42764.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 468

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 182/492 (36%), Positives = 264/492 (53%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A +   + P++ A   I +     F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIITAAHKTGEA-PLDLAQRFIDA-----FMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           A+  IP ++  +Q++I  G+AY  + ++ +      +YG  S + +DE + G       E
Sbjct: 114 ASQMIPDIVDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQE 173

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  KK +P DF LWK + P E  W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   ++    W+HNGF+ +  + +KMSKS GNFIT++++L+T    
Sbjct: 234 EFPHHENEIAQS-EAKTGKQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDILKTVD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
                  V+R  M  T YR PI ++   L  A   L++                     Q
Sbjct: 291 -----PQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAVAGVDAQ 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKN---HDLLPIFNAS 388
            +     +    ++A+ +D+N  + +  L  LA+        ++ K    +DLL  ++A 
Sbjct: 346 ITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+         N+   I+ LV+ R +    K F+ +D IR QL ++G ILED    
Sbjct: 406 LQIFGVVFTDP---TNLDANIDALVKARDVARAAKDFAKSDEIRDQLAAQGIILEDTP-- 460

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 461 ----QGTRWRRK 468


>gi|229542225|ref|ZP_04431285.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326645|gb|EEN92320.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 465

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 174/473 (36%), Positives = 251/473 (53%), Gaps = 53/473 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IQIYNTLTRKKEPFIPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLAFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A++    +P       ++ +  + + +D   L C      PR
Sbjct: 62  -VNYVSNFTDVDDKLIKAAKERGEEVPA------LSERFIKSYFEDIDALGCCHADAHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I+ +I  GHAYE+  ++ + T S P+YG  S + IDE K G R+     
Sbjct: 115 VTENMDAIIAFIEKLIEKGHAYESGGDVYYHTRSFPDYGKLSHQSIDELKSGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS    D+    A  W+HNG++N++  KMSKS GN + +++++E      R  P
Sbjct: 235 HENEIAQSEALTDK--PFARYWMHNGYINIDNEKMSKSLGNIVLVHDIIE------RHDP 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------------SKWPQ 339
             V+R  ML  HYR PI+++ + L  A+  L                         KW +
Sbjct: 287 -QVLRFFMLSVHYRHPINYSEELLANAKAGLERIKTSYQNVKHRLESSANLAEDDEKWLE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHI 391
              S   +    + A+ +D NT + I  L +L++++        T    L         I
Sbjct: 346 QVRS---LHRQFIEAMDDDFNTANGISVLFELSKQANYYLRGKNTTETVLRAFMKEFETI 402

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            G+   K      +   IE L+++R    K + F  AD IR +L+S   ILED
Sbjct: 403 SGVLGLKLEEEVLLDEEIEALIEKRNEARKARNFQLADEIRDKLKSMNIILED 455


>gi|150015023|ref|YP_001307277.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|187629800|sp|A6LPP1|SYC_CLOB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149901488|gb|ABR32321.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 466

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 177/487 (36%), Positives = 258/487 (52%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL R+  EF  I    ++MYVCGPTVY+F HIGN R  IVFD + R L Y  G K
Sbjct: 1   MRVFNTLTRQKEEFIPIITGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I +A  E  ++        +  K  +++ +D   L     T  PR
Sbjct: 60  -VRFVQNFTDIDDKMINKANDEGITV------KELGDKYIKEYYQDADSLKIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I  ++ +I  G AYE + ++ + T    NYG    + +D+ ++G R+     
Sbjct: 113 ATEYIHDIIKFVEELIEAGFAYEVDGDVYYSTKKFDNYGRLVGQNLDDLQVGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+   LG   DIH GG+DL FPH
Sbjct: 173 KKDPMDFAVWKAQKPGEPAWESPWGPGRPGWHIECSCMAKKLLGDTIDIHAGGMDLRFPH 232

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT AN W+H  F+N++ +KMSKS  NF T  E+LE        + 
Sbjct: 233 HENEIAQSEAL--TGKTFANYWLHAAFVNVDNKKMSKSLNNFFTAREVLE-------EYS 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPA---- 350
           +  IR  ML  HYR  I+FT + L  A+  + +           +   +K ++D A    
Sbjct: 284 SDAIRFLMLSGHYRIQINFTKELLDSAKSSIERLYNCINNLENLKDEVTKKLMDEAEEKY 343

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASAHILG- 393
                      +  + +D NT  AI  L  L ++         + +L     +    LG 
Sbjct: 344 LKSLDKYREKFIEKMDDDFNTADAISVLFDLTKDINNNVNINSSSELCEKAESMVRELGN 403

Query: 394 -IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            + + ++ + K++   I++L+++R    K K F+ AD IR  L+S+  ILED   P    
Sbjct: 404 PLGILQDRIEKDLETEIQELIEKRQQARKNKDFALADKIRDDLKSRNIILED--TP---- 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKK 464


>gi|282601150|ref|ZP_05980914.2| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570019|gb|EFB75554.1| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 464

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 185/475 (38%), Positives = 258/475 (54%), Gaps = 56/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NT+ R+  EF        R+YVCGPTVY++ HIGNARPMIVFD L R L Y  G K
Sbjct: 1   MQIFNTMTRQKEEFVPQKEGEYRIYVCGPTVYNYIHIGNARPMIVFDTLRRYLEYC-GNK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ +QE  S+        +  K   +++KD+  L    PT +PR
Sbjct: 60  -VYYVSNITDIDDKLIQKGQQEGISM------QEVARKFEAEYIKDSEGLNVEEPTVRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I ++++++  GHAY A N ++ F   S P YG  S   +D+ + G R     
Sbjct: 113 ATEHIGEIIKIVKDLVDSGHAYVARNGDVYFRVKSDPGYGKLSHLNLDDLESGNRTLRSQ 172

Query: 184 H----KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++PADF +WK + P EP WESPWG GRPGWHIECSAM+  +LG   D+H GG D
Sbjct: 173 MDDDLKEDPADFAVWKAAKPGEPYWESPWGHGRPGWHIECSAMARKHLGNTIDLHAGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+     +  W+HNGFLN+   KMSKS GNF T+ E+ E  K+G 
Sbjct: 233 LIFPHHENEIAQSECANGC-TFSRYWMHNGFLNINNEKMSKSAGNFFTVREIAE--KYGY 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-------- 351
                  IR  ML   YR P+++TV  +   +  L +     T +  +D A+        
Sbjct: 290 EP-----IRYFMLTAGYRMPLNYTVDLIESCKNSLER---LYTCRDNLDFAIEHAHGTDT 341

Query: 352 -------------LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASA 389
                         +A+ +DLNT  A+ A+    +E     D             F+   
Sbjct: 342 ALAAKCEEARTKFKTAMDDDLNTPDALAAVFDFVKEINTLSDASDKATLELAAKTFDELT 401

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LG+   ++     +   +  LV+ER    K K ++ AD IR QL   G+ + D
Sbjct: 402 GVLGLLYNRK--KDEVPADVTALVEERAAAKKAKDWAKADAIRAQLTEMGWSVTD 454


>gi|169834403|ref|YP_001694075.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168996905|gb|ACA37517.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 457

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 177/468 (37%), Positives = 252/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 12  IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 71  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 124 VVEFMDDIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 184 TARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 244 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 296 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 355

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + ++A+  ++ N+D  +         I GI   +E L+      
Sbjct: 356 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLDAE---- 411

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 412 IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTK---DGVRWTR 456


>gi|116333230|ref|YP_794757.1| cysteinyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122270082|sp|Q03SU6|SYC_LACBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116098577|gb|ABJ63726.1| cysteinyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 470

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 179/496 (36%), Positives = 262/496 (52%), Gaps = 68/496 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+   F+ I P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   LKVFNTMTRQKETFEPITPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +E  ++P       +  +    F +DT  L     T  PR
Sbjct: 61  -VKYVSNFTDVDDKMINEANKEGITVPE------LGDRFIAAFKEDTAALNIEPATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
           AT HI ++I  +Q++I   +AY  + ++ +      +YG  +   +D+ + G    T   
Sbjct: 114 ATEHINEIIEFVQDLIDKDYAYPVDGDVYYRAHKFSHYGELAHLNLDDLEEGASQHTNDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W SPWG GRPGWHIECS MS+HYLG+ FDIHGGG DL
Sbjct: 174 ETARKEDPVDFALWKGAKPGEISWPSPWGAGRPGWHIECSVMSTHYLGETFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           IFPHH+NEIAQS    +  KT  + W+HNGF+ +  +  KMSKS GNF+T++++L+T   
Sbjct: 234 IFPHHQNEIAQSEA--KTGKTFVHYWLHNGFVTIGDDNEKMSKSLGNFVTVHDILKTVD- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DP 349
                    +R  M  T YR PI +T Q L  AE  L +      + G          DP
Sbjct: 291 ------PQTLRFFMSTTQYRRPIQYTQQNLDTAERNLERLQTAYDNMGYRLKDAEAGNDP 344

Query: 350 AV-----------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
            V           + A+ +D N  + I  +H+LAR      +   +F  +     ++  +
Sbjct: 345 KVEQETRQIVADYIDAMDDDFNVQNGIAKVHELARLGNVYAERPVVFAGT-----LDFIR 399

Query: 399 EHLNKNISI--------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + L+  +S+               I+ L+ ERL   K + F  +D IR+QL+S+G ILED
Sbjct: 400 QTLSDLLSVFGIKFAAAATLDDDRIQALIDERLAARKSRDFLRSDEIREQLKSQGIILED 459

Query: 445 YKNPDNGQRMTRWKQK 460
                   + TRW+++
Sbjct: 460 TP------QGTRWRKE 469


>gi|302544419|ref|ZP_07296761.1| cysteine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462037|gb|EFL25130.1| cysteine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 466

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 171/474 (36%), Positives = 252/474 (53%), Gaps = 56/474 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTGARQIRDFSPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT+VRN+TDIDDKII + A Q  P   I  A       N + F      L CL PT++P
Sbjct: 62  -VTFVRNVTDIDDKIIAKSAEQGRPWWSIGYA-------NERAFTSAYDVLGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
           RAT HIP+MI +++ +I  GHAY A   + FD  S P Y   S + +D    G R P   
Sbjct: 114 RATGHIPEMIEMMRGLIDRGHAYAAEGNVYFDVRSYPEYLRLSNQDLD----GLRQPSGE 169

Query: 182 -KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DL
Sbjct: 170 GETGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGVDL 229

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       +
Sbjct: 230 IFPHHENEIAQAKGFG--DDFATYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------K 280

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--------GIIDP 349
            W   V+R  +   HYR  I+++ + L EAE   ++   + Q  T K          + P
Sbjct: 281 RWRPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFIQRVTEKAGKAVPAAADVPP 340

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH 400
           A   A+ +DL    A+  +H   R+                L    A   +LG++   +H
Sbjct: 341 AFAEAMDDDLGVPQALAVVHTTVRQGNSALTADDKEAAVARLAEVRAMLGVLGLDPLDDH 400

Query: 401 ----------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                     L+  +   +  ++++R      K +++AD IR QL+  G ++ED
Sbjct: 401 WSGGSDRGEDLHGVVDSLVRLVLEQRQAARGRKDYATADAIRDQLQQSGLVIED 454


>gi|125718833|ref|YP_001035966.1| cysteinyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498750|gb|ABN45416.1| Cysteinyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 447

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 175/468 (37%), Positives = 254/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVL--- 352
               V+R      HYR+PI+FT + + +A   L       + P T  ++     A L   
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQAESAQLQAFLDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKGALAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|319762811|ref|YP_004126748.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330824891|ref|YP_004388194.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317117372|gb|ADU99860.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329310263|gb|AEB84678.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 458

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 161/391 (41%), Positives = 225/391 (57%), Gaps = 36/391 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + +F  ++  ++RMYVCG TVYD  H+G+AR MI FDV+ R LR      
Sbjct: 3   LRIYNTLSRALEDFSPLEAGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRA--SGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + I  +T +      +D   L    PTH+PR
Sbjct: 61  AVTYVRNITDIDDKIIRRAVEN------GETIRSLTDRMIDALHEDADALGIERPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  + 
Sbjct: 115 ATEYVPQMLSMIGTLQSRGLAYQAANGDVNYAVRKFPGYGRLSGKSLDELNAGERVAVQD 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK + P EP    W+S +G GRPGWHIECSAM    LG+ FDIHGGG DL
Sbjct: 175 GKLDPLDFVLWKGAKPEEPAEVKWQSAYGEGRPGWHIECSAMGCTLLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A +W+HNGF+N++  KMSKS GNF TI ++L       +
Sbjct: 235 AFPHHENEIAQSEGATG-KPFARVWMHNGFINVDNEKMSKSLGNFFTIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  +R  ++ +HYR P++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 EYDAETVRFFVVRSHYRSPLNYSDVHLDDARAALKR---LYTALSLVAPAPVAIDWAEPH 343

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKN 378
                +A+  D  T  A+  L  LA E  ++
Sbjct: 344 AARFKAAMDEDFGTPEAVAVLFDLAGEVNRS 374


>gi|283795457|ref|ZP_06344610.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
 gi|291077118|gb|EFE14482.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
 gi|295091141|emb|CBK77248.1| cysteinyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 469

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 189/495 (38%), Positives = 263/495 (53%), Gaps = 67/495 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E       DA   I+ +   +  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIRKAIEEGV-----DA-QTISERYIAECKKDMEMMNVKPATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M  +IQ +I  GHAY A +  + F T S   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMEEMIQELIDKGHAYVAKDGTVYFRTKSFKEYGKLSHKNLEDLQSGFRELKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG   DIH GG DL
Sbjct: 173 GEEDKEDPTDFVLWKPKKDGEPFWESPWCEGRPGWHIECSVMSKKYLGDSIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 VFPHHENEIAQSEAANG-KPFAKYWMHNAFLNIDNKKMSKSLGNFRTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTS 343
            +   V+R  ML  HYR P++F+                 V+RL +   LL+K  +   S
Sbjct: 285 QYDLQVLRFFMLSAHYRSPLNFSAELMEASRNGLERILTGVERLRD---LLAKAAEKEMS 341

Query: 344 ----KGIIDPAVL-----SALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPI 384
               + +   A L     +A+ +D NT  AI A+ ++ +        ES++ +  +L   
Sbjct: 342 GEERRNLETAAELVKKFEAAMDDDFNTADAISAIFEMVKLSNSTISEESSRAYLEELKGS 401

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 +LGI    E   + +   IE +++ER    K K F+ AD IR +L   G +LED
Sbjct: 402 IERLCEVLGI--ITEKKAEVLDDEIEAMIEERQQARKAKNFALADEIRGKLLDMGIVLED 459

Query: 445 YKNPDNGQRMTRWKQ 459
            +         +WK+
Sbjct: 460 TREG------VKWKR 468


>gi|187931126|ref|YP_001891110.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|229558635|sp|B2SFH9|SYC_FRATM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187712035|gb|ACD30332.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 459

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 177/467 (37%), Positives = 251/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNIT+IDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITNIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGNTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           + A+ ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 344 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    + S  IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 404 KQGDGADAS-EIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 449


>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511828|sp|C6BS23|SYC_DESAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 485

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 183/491 (37%), Positives = 255/491 (51%), Gaps = 67/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF  ++ + + +Y CG T YD  HIG+AR  +VFD+L R LR+   + 
Sbjct: 1   MRLYNTLNRKKEEFVPLNGNKVNLYACGITAYDLCHIGHARSSVVFDILVRYLRFKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TDIDDKII RA +   +       + +  K   +F  D  +L  L    +P+
Sbjct: 60  -VTFVRNFTDIDDKIINRANETGVTS------TELAEKFIGEFYVDMDKLNILRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+MI L Q +I   HAY   + ++ F   S  +YG  S R I++ + G R+    
Sbjct: 113 CTEHIPEMIELTQTLIEKDHAYATPSGDVYFKVRSFDDYGKLSGRNIEDLQSGARIQPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWH+ECSAMS  Y    FDIHGGG DL FP
Sbjct: 173 EKQDPLDFALWKAAKPGEPSWESPWGQGRPGWHLECSAMSEKYFELPFDIHGGGQDLSFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E  A  W+HNGF+ +   KMSKS GNF TI ++L+        + 
Sbjct: 233 HHENEIAQSEAATGKE-MARFWVHNGFVQINSEKMSKSLGNFFTIRDILD-------KFM 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGII 347
              +R  +L  HYR P+DF+ + L EAE  +                SKW + +  + ++
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFEALEEAEKGIRRVYSALEQTAEALNKSKWSKAALPEEVL 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLA------------RESTKNHD----LLPIF 385
                 +     A+ +D+NT  A+  +  L             R+S    D    +L   
Sbjct: 345 AEIEDAEKGWADAMEDDMNTAGAMGHMFTLIRLAGRIGEEKSWRKSEGGRDAWIRILEDM 404

Query: 386 NASAHILGIEV--CKEHLN---------KNISIA-IEKLVQERLILLKMKKFSSADYIRK 433
                +LGI     KE L          K I +A +E+LV  R    K K F+ +D IR 
Sbjct: 405 KKWGEVLGIFTRDPKEFLEELKLCMLERKGIEVAKVEELVAARQEARKNKDFARSDEIRD 464

Query: 434 QLESKGFILED 444
           +L   G  ++D
Sbjct: 465 ELIELGVEVKD 475


>gi|281492464|ref|YP_003354444.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376128|gb|ADA65619.1| Cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 448

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 254/462 (54%), Gaps = 40/462 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A  E      N +   ++ +    F +DT  L     +  P+
Sbjct: 60  -VQYISNFTDVDDKIIKAAANE------NISTKELSERYIAAFYEDTDALNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  I  MI  IQ ++    AY +  ++ F  S   +Y   + + + +   G   R  E+
Sbjct: 113 ATEFIEAMIEFIQELVDKEFAYVSQGDVYFRVSKSKDYAKLANKNLADLLAGASGRTDEE 172

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++PADF LWK +   E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TKLKESPADFALWKSAKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   ++  N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQS-EAKTGQRFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVVN----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYND 358
               ++R  +  THYR P++FT   LTEAE  + K          +   + + L+   ND
Sbjct: 287 --PQILRFFLATTHYRRPVNFTDDALTEAENNIKKIENAYRHLDEQAESNLSALTTFRND 344

Query: 359 LNTVSAIQALHKLARESTKNHDLLP-------------IFNASAHILGIEVCKEHLNKNI 405
              V+A+     +A   T  +D +               F+    ILGI   K    +++
Sbjct: 345 F--VAAMDEDFNIANGMTVFYDFVSWVNKGNGGPEVKEFFDQVLEILGI---KFKFEQSL 399

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              IE +++ R +  +++ F+ +D IR  L+++G +LED K+
Sbjct: 400 DSEIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKD 441


>gi|295108532|emb|CBL22485.1| cysteinyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 469

 Score =  301 bits (770), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 182/477 (38%), Positives = 251/477 (52%), Gaps = 51/477 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF  ++   +RMYVCGPTVY+  HIGNARPMI+FD + R L Y   E 
Sbjct: 1   MKLFNTMSRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYLEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGVSS------EEISQRYIAECKKDMAGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ +I  G+AY  A+  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIDGMIDMIQTLIDKGYAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPFWKSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS C + +   A  W+HN FLN++ RKMSKS GNF T+ ++       G 
Sbjct: 233 VFPHHENEIAQSECCNGV-PFAKYWMHNAFLNIDNRKMSKSLGNFRTVRQI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEI-LLSKWPQTSTSKGIIDP 349
            +   V+R  ML  HYR P++F+          ++R+T+A   L  +    S  +   D 
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMESSKNALERITDAAARLRDRQAAASVQEASEDE 344

Query: 350 AVL------------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--- 394
             +             A+ +D NT  A+ A+ +L +    N         +AH L +   
Sbjct: 345 KKMMQEEAAFVTKFEEAMDDDFNTADALAAVFELVKFGNTNVQEGSSAEFAAHTLEVMTK 404

Query: 395 --EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             +V    L+K   I    IE L+ ER    K K F+ AD IR  L  KG  L+D +
Sbjct: 405 LCDVLGLILDKKEEILDEEIENLIAERQAARKAKDFARADEIRGLLLDKGIELKDTR 461


>gi|169830058|ref|YP_001700216.1| cysteinyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|226735062|sp|B1HNM3|SYC_LYSSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|168994546|gb|ACA42086.1| Cysteinyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 466

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 261/488 (53%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R  +Y   + 
Sbjct: 3   IQIFNSLSRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII+ A +      + + +  +T +    + +D T L C      PR
Sbjct: 62  -VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +I  IQ +I  G+AYE+  ++ + T     YG  S + +D+ K+G R+     
Sbjct: 115 VTEHMADIIQFIQVLIEKGYAYESAGDVYYRTRKFNGYGKLSHQSVDDLKIGARIEAGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +  DF LWK + P E  WESPWG GRPGWHIECS M+  +LG   DIH GG DL FPH
Sbjct: 175 KDDALDFALWKAAKPGEIFWESPWGNGRPGWHIECSVMAREHLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS   +  +KT A  W+HNG++N++  KMSKS GNFI +N++        +   
Sbjct: 235 HENEIAQSEAHN--DKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIR-------KQID 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             V+R  ML  HYR PI+F           ++R+  A   +     T+ S G      L+
Sbjct: 286 PQVLRFFMLSVHYRHPINFAKDLVEAASAGLERIRTAYNNVKHRLTTTVSLGDHSDEWLN 345

Query: 354 -----------ALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNASAHI 391
                      A+ +D NT + I  L +LAR       E+     +L      F     +
Sbjct: 346 KITEQKAQFEEAMDDDFNTANGISVLFELARIANIYLNETNTCKKVLETFIETFEVLGDV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGIE  K    + +   IE L+QER+   K + F+ +D IR  L+++G ILED +     
Sbjct: 406 LGIEFAK--EEELLDEEIEALLQERVEARKNRDFARSDEIRDHLQAQGIILEDTRQG--- 460

Query: 452 QRMTRWKQ 459
              TRWK+
Sbjct: 461 ---TRWKR 465


>gi|325689003|gb|EGD31011.1| cysteine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 447

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 173/468 (36%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PKE-----VADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  ++ ++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTNEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN-- 357
               V+R      HYR+PI+FT + + +A   L     T      G  D   L A  +  
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDKF 345

Query: 358 ------DLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
                 D N  + I  + +LA+          +   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 483

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 256/482 (53%), Gaps = 67/482 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL  +  EF+ ++   ++MYVCG TV +++HIG+ R +I +DV+ R L Y   + 
Sbjct: 2   IKVYNTLTGEKEEFKPVEKDKVKMYVCGLTVQNYSHIGHIRSVINYDVIRRFLEYLGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TDI++KI++RA +E    P     + + +K    F++D             R
Sbjct: 61  -VDYISNFTDINEKIVQRAAEEDLK-P-----AALANKYANAFLEDLREFNVKPADKYLR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + ++ ++I ++  +I  G+AYE N  + F   S  +YG  S R +DE + G R+     
Sbjct: 114 VSENVAEIIEMVTTLIEKGYAYEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNKE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK+    E GW+SPWG G PGWHIECSAMS   LG  FDIHGGG+DLIFPH
Sbjct: 174 KRNPLDFGLWKK-VESETGWDSPWGEGWPGWHIECSAMSMKRLGSTFDIHGGGVDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +K  N W+HNG +NL G KMSKS GNF T  E+L       + + A
Sbjct: 233 HENEIAQSEAYSD-QKFVNYWLHNGTVNLSGEKMSKSQGNFFTSREVL-------KEFSA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIID--- 348
            V+R  +L  HYR PIDF+ ++L EA   L++   T             S ++  I+   
Sbjct: 285 EVVRYFLLTRHYRSPIDFSYEKLEEAATSLTRIKNTRKQLAKVLSLDINSAAENKIEQEF 344

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARE------------STKNHDLLP----I 384
                      ++AL +D NT  AI  +H LA E            + KN  LL     I
Sbjct: 345 FENIISKKKEFIAALKDDFNTAEAIGVIHDLAGEINSYINRKEFDLNEKNFALLTKTEKI 404

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM-------KKFSSADYIRKQLES 437
           F     ILG+E   E  +++ S  +  LV    +L+K+       K +  AD IR QLE 
Sbjct: 405 FLELIEILGLEFKLESASESESELVSPLVN---LLIKLRNKARENKNWQEADLIRDQLEE 461

Query: 438 KG 439
            G
Sbjct: 462 IG 463


>gi|319939876|ref|ZP_08014231.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810887|gb|EFW07206.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 447

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 172/460 (37%), Positives = 248/460 (53%), Gaps = 38/460 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLRKFVPLEEGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PKE-----VADKYIAAFREDVTTLGVQPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++  +I  +Q ++  G AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVDYMMDIIDFVQVLVDKGFAYESEGDVYFRVEKSSNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TTRKENPVDFALWKAAKPGEIFWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN- 357
                V+R      HYR+PI+FT + + +AE+ L     T      G +D   L A  + 
Sbjct: 288 ---GQVLRFFFATQHYRKPINFTEKAVHDAEVNLKYLKNTYEQPFTGTVDLTELQAFLDK 344

Query: 358 -------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISI 407
                  D N  + I  + ++A+     H    +  A A +L   GI    E L+ +   
Sbjct: 345 FTAAMDEDFNAANGITVVFEMAKWINSGHYSQEVKTAFAELLQVFGIVFTAEVLDAD--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            IE L+++R      K F++AD IR +L +KG  L D K+
Sbjct: 402 -IEALIEQRQAARVAKDFATADKIRDELAAKGIKLLDTKD 440


>gi|239618081|ref|YP_002941403.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506912|gb|ACR80399.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 458

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 187/465 (40%), Positives = 251/465 (53%), Gaps = 42/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  I P  +R+YVCGPTVY+F H+GN+RP I FD   R L Y  G +
Sbjct: 2   LRITNTLTGKKEEFIPITPGEVRIYVCGPTVYNFVHLGNSRPAITFDAFRRYLEYR-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +   +N TDIDDKII +A +E       DA+ I   +   Q+ KD+  L        PR
Sbjct: 61  VIL-AQNFTDIDDKIIIKANEEGV-----DALEI-AERYIVQYWKDSLALGIRPANFHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ + ++I  IQ++I  G AY  + ++ F+ S   NYG  S RK+++   G R+     
Sbjct: 114 TTHFVDEIIEFIQDLIDKGFAYVVDGDVYFNVSEFKNYGELSHRKLEDMIAGARIEPGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK +   EP W SPWG GRPGWHIECS MS+  LG+ FDIH GG DLIFPH
Sbjct: 174 KKSPEDFALWKAAKEGEPFWNSPWGPGRPGWHIECSVMSTCILGETFDIHAGGADLIFPH 233

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE AQS    R  KT A  W+HNG + L G KMSKS GNFITI + +  KK+G     
Sbjct: 234 HENEKAQSEA--RHGKTFARYWMHNGMMRLAGSKMSKSLGNFITIKDAV--KKYG----- 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTE-------AEILLSKWPQTSTSKGIID---PAV-- 351
              IRL +   HYR PID++ + L E          +L  + ++   K +     P V  
Sbjct: 285 KDAIRLFIFSKHYRSPIDYSEEMLAENLRAVKRVNAILRDFEKSEGDKPLFSKKTPFVKE 344

Query: 352 -----LSALYNDLNTVSAIQALHKLARE--STKNHDL-LPIF----NASAHILGIEVCKE 399
                + AL +D NT  A+  +  L  +   TKN +  L I+    N    +LGI    E
Sbjct: 345 QIERFIEALDDDFNTPKAVALMFDLINKMGETKNRNRKLEIYHLIRNEFGPVLGILEKDE 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ++ NI   ++ L++ R    K K +  AD IR +L   G  L D
Sbjct: 405 EVSANIDGLVKLLIEIRAEFKKDKNYEKADQIRDRLNELGIKLMD 449


>gi|170760749|ref|YP_001788843.1| cysteinyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|229558627|sp|B1KTA5|SYC_CLOBM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169407738|gb|ACA56149.1| cysteine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 465

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 264/488 (54%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G+R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGSRINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKNQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDDLKERGIVLED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 458 -QGVRWKQ 464


>gi|16802285|ref|NP_463770.1| cysteinyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224498915|ref|ZP_03667264.1| cysteinyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224502466|ref|ZP_03670773.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254828699|ref|ZP_05233386.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|255028571|ref|ZP_05300522.1| cysteinyl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|21264004|sp|Q8YAB1|SYC_LISMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|16409604|emb|CAD00766.1| cysteinyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|258601104|gb|EEW14429.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 471

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 172/476 (36%), Positives = 253/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI------- 346
             VIR  ML  HYR+PI      L +A+  L +            QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +               + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|289168428|ref|YP_003446697.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907995|emb|CBJ22835.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 447

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 179/470 (38%), Positives = 255/470 (54%), Gaps = 43/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++ +I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEELIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKLGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +D   L      
Sbjct: 286 -LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQAFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHIL---GIEVCKEHLNKNIS 406
             +A+  D N  + I  + ++A+  ++ N+D   +  A A +L   GI   +E L+ +  
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYD-ASVKQALADMLEVFGIVFVEEVLDAD-- 401

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 --IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|282882291|ref|ZP_06290922.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297841|gb|EFA90306.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 467

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 179/475 (37%), Positives = 249/475 (52%), Gaps = 53/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L  K  EF  I+   + MY CGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLFNSLTGKKEEFYPINSGKVTMYNCGPTVYNYIHVGNARPIVVFDTLRRY--FLYKGL 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDKII RA +E      N     I  K  ++F KD + L      T  P
Sbjct: 59  DVKFVLNFTDIDDKIINRANEE------NKTTEQIAEKYIEEFKKDASALGLYDYQTINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+ + QMI  IQ +I  G AY ++ ++ FD +    YG  S +KI++ + G+RV    
Sbjct: 113 RATHVVDQMISFIQTLIDKGAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRVDVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK     EP W++PWG GRPGWHIECS M+   LG   DIH GG DL FP
Sbjct: 173 LKRNPYDFALWKNKKENEPYWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGEDLKFP 232

Query: 244 HHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQS  C D     A  W+HNG + +   KMSKS GNF T+ E+        + +
Sbjct: 233 HHENEIAQSETCND--APFARFWLHNGMITVNNEKMSKSKGNFFTVREV-------SKEY 283

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDP--- 349
              ++R  +L T YR PI+F+          ++RL  A+  L K  + S  + + +    
Sbjct: 284 DLEILRFFLLTTSYRAPINFSREVMNQTKNALERLYNAKYKLEKDIELSKERDLTEDEKK 343

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASA 389
                     +   A+ +DLNT  AI A+  L ++   N D           + +     
Sbjct: 344 IEEKFQAHRQSFEKAMEDDLNTADAITAIFDLVKDINVNLDENSAKKLLEEGMSLLKTLT 403

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ILGI + +E    ++   I  L++ER    K K F  AD IR +L  KG  ++D
Sbjct: 404 KILGI-MEREKNCDDLDEEILNLIKEREDARKNKDFKRADEIRDELLEKGIEIKD 457


>gi|208780370|ref|ZP_03247711.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743738|gb|EDZ90041.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
          Length = 464

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 176/466 (37%), Positives = 249/466 (53%), Gaps = 47/466 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R   Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFNYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 348

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVC--KEHL 401
           + A+ ND NT  A+  L  LA+E          K      +      +LGI     +E+ 
Sbjct: 349 IKAMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 408

Query: 402 NKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +   +    IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 409 KQGDGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 454


>gi|294496962|ref|YP_003560662.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346899|gb|ADE67228.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 465

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 171/487 (35%), Positives = 255/487 (52%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL R+   F  ++ + ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IKLYNTLTRQKETFVPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A++    +P       I ++    + +DT+ L C      PR
Sbjct: 62  -VEYVSNFTDVDDKLIKAAKELGEDVPT------IANRFIDAYFEDTSALGCKHADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I  ++  G+AYE+  ++ + T     YG  S + IDE + G R+     
Sbjct: 115 VTENMDIIIEFIDELVKKGYAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFT---------------------VQRLTEAEILLSKWPQTSTS 343
            ++R  +L  HYR PI++                        RL  A  L     +    
Sbjct: 287 SLLRFFILSVHYRHPINYNEEILENTRKGFERLQTAYGNLTHRLEAATNLQEDASEWFEK 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPI----FNASAHIL 392
              +    +  + +D NT +AI  L +LA+       E T + D++      F      +
Sbjct: 347 LKELRETFVEEMDDDFNTANAISVLFELAKQANLYLLEQTTSTDVIEAFIKEFKELGAAI 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI   +  L   +   I++L+Q R+   K + F  AD IR +L++K  ILED        
Sbjct: 407 GITFGEAEL---LDEEIDQLIQGRIQARKDRNFQLADQIRDELKAKNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|160903262|ref|YP_001568843.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|187629839|sp|A9BGT9|SYC_PETMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160360906|gb|ABX32520.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 469

 Score =  300 bits (769), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 178/471 (37%), Positives = 262/471 (55%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+TL  ++ +   +    I++Y+CGPTVY+  HIGNARP+I+FD   R L Y  G K
Sbjct: 7   IKIYDTLSGQVVDLVPVKEGEIKIYLCGPTVYNLLHIGNARPIIIFDAFRRFLEYI-GYK 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT V+N TDIDDKIIE+A++E+  +P  +    +  +   ++ +D T L   A    P+
Sbjct: 66  -VTLVQNFTDIDDKIIEQAKKEN--LPFEE----VGKRYIIEYWRDMTALKARAFNFHPK 118

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            TN++ ++I  I+ +   G+AY+A N ++ F+      YG  S RK+++ K+G RV    
Sbjct: 119 TTNYVDEIISYIKELEEKGYAYKAENGDVYFEVEKFSRYGELSHRKVEDLKVGVRVEVSE 178

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF LWK S   EP WESPWG+GRPGWHIECS MSS  LG  FDIH GG DLIFP
Sbjct: 179 YKKNPLDFALWKASKEGEPFWESPWGKGRPGWHIECSVMSSEILGDTFDIHAGGNDLIFP 238

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+  A   +  A  W+HNG + +   KMSKS GN   + +LL  KKF      
Sbjct: 239 HHENERAQA-IAKSGKDFAKYWMHNGMIRMAQDKMSKSLGNVWYLRDLL--KKFD----- 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------------WPQTSTSKGI 346
           + V+++ +L  HYR PID + + L   E+ +++                  PQ       
Sbjct: 291 SDVLKIFILSKHYRIPIDVSEELLRNQEVSVNRVKESLNEAETFFNGKVPCPQKMNYFKE 350

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFNASAHILGIEV 396
            +  ++S+L ND +T S +  + +L+R          E T  ++   I N    +LG+  
Sbjct: 351 QEEYLISSLSNDFDTPSVVARIFELSRDLNKALNSRDEETIKNNYYIIRNIYGSVLGVFE 410

Query: 397 CKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E + KN   ++  +E ++  R  L + K ++ +DYIR  L   G  ++D
Sbjct: 411 TNEQIQKNNVELNQLMEIILNVRSALREEKLYNLSDYIRDNLSKIGIEIKD 461


>gi|15673833|ref|NP_268008.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|24418700|sp|Q9CEJ0|SYC_LACLA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|12724882|gb|AAK05949.1|AE006415_4 cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407342|gb|ADZ64413.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 448

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 252/462 (54%), Gaps = 40/462 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A+        N   +  + +    F +DT  L     +  P+
Sbjct: 60  -VQYISNFTDVDDKIINGAK------AANMTTTDFSERYIAAFYEDTDALNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  I  MI  IQ ++    AY +  ++ F  S   +Y   + + + +   G   R  E+
Sbjct: 113 ATEFIEAMIEFIQELVDKEFAYVSQGDVYFRVSKSKDYAKLANKNLADLLAGASGRTDEE 172

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++PADF LWK +   E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TKLKESPADFALWKSAKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +K  N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQS-EAKTGQKFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVVN----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYND 358
               ++R  +  THYR P++FT   LTEAE  + K          +   + + L+   ND
Sbjct: 287 --PQILRFFLATTHYRRPVNFTDDALTEAENNIKKIENAYRHLDEQAESNLSALTTFRND 344

Query: 359 LNTVSAIQALHKLARESTKNHDLLP-------------IFNASAHILGIEVCKEHLNKNI 405
              V+A+     +A   T  +D +               F+    ILGI   K    +++
Sbjct: 345 F--VAAMDEDFNIANGMTVFYDFVSWVNKGNGGPEVKEFFDQVLEILGI---KFKFEQSL 399

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              IE +++ R +  +++ F+ +D IR  L+++G +LED K+
Sbjct: 400 DSEIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKD 441


>gi|21222630|ref|NP_628409.1| cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|30316185|sp|Q9L0Q6|SYC_STRCO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|7242756|emb|CAB77329.1| putative cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 613

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 166/470 (35%), Positives = 250/470 (53%), Gaps = 48/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 150 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 208

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII +A ++      N     I  +N + F      L CL PT++PR
Sbjct: 209 -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 261

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S+P Y S S + +DE +  +   E   
Sbjct: 262 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQPSEDGET-G 320

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DLIFPH
Sbjct: 321 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 380

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + WP 
Sbjct: 381 HENEIAQAKGFG--DAFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 431

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTS--------KGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE    +   + Q  T            + PA   
Sbjct: 432 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 491

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-------------------DLLPIFNASAHILGI 394
           A+ +DL    A+  +H   R+                         +L +    A   G 
Sbjct: 492 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGA 551

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   E L   +   +  ++ +R      K +++AD IR QL   G ++ED
Sbjct: 552 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDQLGQSGLVIED 601


>gi|328676393|gb|AEB27263.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 459

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 177/467 (37%), Positives = 249/467 (53%), Gaps = 49/467 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +   S       + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANENGEST------TELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKKGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDPAV 351
           V+R  +  T YR  I+++ + L  A+  + +               P  ++     +   
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASE---YEEKF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI------EVC 397
           +  + ND NT  A+  L  LA+E          K      +      +LGI      E  
Sbjct: 344 IKVMDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYF 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+    + S  IEKL+ ER    K K ++ AD IR QL+ +G ILED
Sbjct: 404 KQGDGADAS-EIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILED 449


>gi|327460677|gb|EGF07012.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327488752|gb|EGF20551.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 447

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 175/468 (37%), Positives = 251/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PKE-----VADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  ++ ++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHDYAKLANKTLADLELGASGRTNEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN-- 357
               V+R      HYR+PI+FT + + +A   L     T      G  D   L A  +  
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDKF 345

Query: 358 ------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
                 D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|284800534|ref|YP_003412399.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284993720|ref|YP_003415488.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284056096|gb|ADB67037.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284059187|gb|ADB70126.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 471

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 172/476 (36%), Positives = 253/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI------- 346
             VIR  ML  HYR+PI      L +A+  L +            QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +               + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQSDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|288550004|ref|ZP_05968971.2| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288316405|gb|EFC55343.1| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 465

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 180/483 (37%), Positives = 263/483 (54%), Gaps = 50/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  Y  
Sbjct: 6   LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYNL 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K   YVRNITDIDDKII+RA +        ++   +  +   +   D   L    P  +P
Sbjct: 66  K---YVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHNDFDALNIQRPDSEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT+HI ++I + + +I  GHAY A+N +++F   + P YG  SR+ +++ + G RV   
Sbjct: 117 RATHHIHEIIDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLEQLQAGARVDVV 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LGK FDIHGGG DL+F
Sbjct: 177 DVKRNPMDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + +
Sbjct: 237 PHHENEIAQSTCAHGGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGI-------IDPAVLS 353
            A  +R  ++  HYR  ++++ + L +A   L +       T K +        +   + 
Sbjct: 289 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVPAAGGEAFEARFVE 348

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAH------ILGI--------EVC 397
            + +D NT  A   L  +ARE    K+ D+      ++H      +LG+           
Sbjct: 349 VMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDAFLQS 408

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               ++     IE+L++ RL   + K +++AD  R +L   G ILED      G + T W
Sbjct: 409 GAQADEGEVAEIEQLIKARLEARQAKDWAAADAARNRLTEMGIILED------GPQGTTW 462

Query: 458 KQK 460
           ++K
Sbjct: 463 RRK 465


>gi|116871622|ref|YP_848403.1| cysteinyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460673|sp|A0AF38|SYC_LISW6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116740500|emb|CAK19620.1| cysteinyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 471

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 173/476 (36%), Positives = 252/476 (52%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLTREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPDEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI------- 346
             VIR  ML  HYR+PI             ++RL  A   +    QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +               + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|148657145|ref|YP_001277350.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148569255|gb|ABQ91400.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 478

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 256/491 (52%), Gaps = 59/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R +  F+ ++P  ++MYVCG TVYD AHIG+A   IVFDV+ R L Y     
Sbjct: 3   IRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RAR+      I      +      +F++D   L        PR
Sbjct: 61  AVQHVVNFTDVDDKIINRARE------IGRDPKELAESYIAEFLEDLEALNVKRAHIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +P++   I  +I  GHAY  + ++ F  +++P+YG  SRR +D+   G R+     
Sbjct: 115 ATETMPEIQQFITRLIETGHAYVVDGDVYFRIATVPDYGKLSRRSLDDMIAGNRISVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NPADF LWK + P EP W+SPWG GRPGWHIECSAM+  +LG+  DIHGGG DLIFPH
Sbjct: 175 KENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGADLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGR---------KMSKSNGNFITINELLETK 295
           HENEIAQ+      +  A  W+HNG L ++ R         KMSKS GN +TI E L   
Sbjct: 235 HENEIAQTESLTG-KPFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLA-- 291

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDP 349
                 +   V+RL +L + YR P+ F  +   + E  L +       P  +   G+   
Sbjct: 292 -----QYHPDVLRLTVLSSSYRSPLAFGEEIAADQERKLVRLRSALEPPIGTIEAGLAVD 346

Query: 350 AVL-----------SALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASA----- 389
            +L           +A+ +D NT  A+ AL  L R      D      P   A A     
Sbjct: 347 VLLAAARTTRERFIAAMDDDFNTAGALAALFDLVRAINTARDAGVGGAPFAEAQATFREL 406

Query: 390 -HILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             +LG+ +  +  + +  +  I+ L++ R  L K K+F+ AD +R +L   G  LED   
Sbjct: 407 TDVLGLTLTPQQPIIQQAAPFIDLLIEVRSELRKAKQFALADMVRNRLADLGITLED--T 464

Query: 448 PDNGQRMTRWK 458
           P      TRWK
Sbjct: 465 PQG----TRWK 471


>gi|195978850|ref|YP_002124094.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|229558791|sp|B4U570|SYC_STREM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|195975555|gb|ACG63081.1| cysteinyl-tRNA synthetase CysS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 448

 Score =  300 bits (768), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 172/460 (37%), Positives = 243/460 (52%), Gaps = 38/460 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 3   IKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTVRRYFEY--AGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++   S P   A   I +     F++DT  L     T  PR
Sbjct: 61  TVNYISNFTDVDDKIIKAAKEAGLS-PKQLADQFIAA-----FMEDTKALGVKPATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  I  +I  G+AYE+  ++ F  +   NY   + + I + + G       E
Sbjct: 115 VMDYMDEIIAFIAALIKKGYAYESAGDVYFRVAKASNYARLANKTIADLEAGASGRTDTE 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W SPW  GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 175 TALKENPLDFALWKSAKPGEVSWTSPWSAGRPGWHIECSVMATELLGDTIDIHGGGADLE 234

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T+++LL+T      
Sbjct: 235 FPHHTNEIAQSEA--KTSKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTVD---- 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPA 350
                 +R  +   HYR+PI+FT + + +AE+ L     T          S+       A
Sbjct: 289 ---GQTLRFFLATQHYRKPINFTEKAIHDAEVNLKYLKNTLQQPTVATADSSQLAAFVTA 345

Query: 351 VLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + I  L  +A+       +  +   F     + GI    E L+     
Sbjct: 346 FKAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAESLDTE--- 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            IE+L+ ER      + F+ AD IR QL ++G  L D K+
Sbjct: 403 -IEQLIAERQEARANRDFAKADAIRDQLAAQGIKLLDTKD 441


>gi|124267642|ref|YP_001021646.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124260417|gb|ABM95411.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 474

 Score =  300 bits (768), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 185/467 (39%), Positives = 259/467 (55%), Gaps = 43/467 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++I+NTL R    F  I+P ++RMYVCG T+YD  H+G+AR M+ FDV+ R LR   G 
Sbjct: 15  SLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVS-GL 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRNITDIDDKII+RA +    IPI      +T + T    +D   L    PTH+P
Sbjct: 74  R-VTYVRNITDIDDKIIKRALER--GIPIRQ----LTDEMTAAMHQDIGALGIEPPTHEP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT ++  M+ LI+ +  +G AY     ++ +     P YG  S + ID  + G RV   
Sbjct: 127 RATEYVGAMVGLIEVLERNGLAYRVPGGDVNYSVRKFPGYGRLSGKSIDALRAGERVAVL 186

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K +P DF+LWK + P EP    +++P+G GRPGWHIECSAMS   LG+ FDIHGGG+D
Sbjct: 187 EGKDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGGGMD 246

Query: 240 LIFPHHENEIAQSCCADRIEKT---ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           L FPHHENEIAQS  A  +       N+W+HNGFLN++  KMSKS GNF TI ++L  K+
Sbjct: 247 LQFPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDIL--KR 304

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---- 352
           + G +     IR  ML  HYR P +F+   L +A   L +   T+     + PA +    
Sbjct: 305 YDGET-----IRFFMLRVHYRSPFNFSDAGLDDARSGLRRL-YTALEGTAVAPAEIDWTD 358

Query: 353 -------SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIEVCKEH 400
                  +A+ +D NT  A+  L  LA E     S ++  LL     +  +L  E   ++
Sbjct: 359 PHAARFKAAMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAA-QY 417

Query: 401 LNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L     +    IE  +  R      + F+ +D IR  L ++G +L+D
Sbjct: 418 LQGGSGVDTGHIEAQIAARAAAKAARDFAESDRIRDALAAQGIVLKD 464


>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6831683|sp|O67163|SYC_AQUAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 495

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 184/512 (35%), Positives = 263/512 (51%), Gaps = 78/512 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  K+ EF  I+P  + +Y CG TVYD +H+G+ R +IVFDV  R L +   + 
Sbjct: 3   LRIYNTLSGKVEEFVPINPPKVLIYTCGVTVYDDSHVGHGRSLIVFDVFRRFLEHLGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII RA+QE       D ++I   +   ++  D   +       +PR
Sbjct: 62  -VKFVRNFTDVDDKIINRAKQE-----CTDFMTI-ADRYIARYYVDMENIRVRPADVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I +IQ ++  G+AY    ++ F      +YG  S+R I+E   G RV     
Sbjct: 115 VTEHIPEIIEVIQKLVEKGYAYVVEGDVYFSVKKFKDYGKLSKRDIEELIAGARVEPSEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL+FPH
Sbjct: 175 KRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  A  W+HNG + + G+KMSKS GN++T+ E+          +  
Sbjct: 235 HENEIAQA-EAITGKPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVY-------TKYHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI-------------LLSKWPQTSTSKGIIDPA- 350
            V+RL +L THYR P+DF+ +++ E                LL K     + +G   P  
Sbjct: 287 DVLRLLVLFTHYRSPLDFSWEKMEETLKAYERLKNAIEDLELLKKLQVVESKEGGTHPLY 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTK------------NHDLLP------ 383
                      ++L +D NT  A+  ++KL  E  K            + +L        
Sbjct: 347 EQVKEFEENFYASLSDDFNTPEALSHVYKLVGELNKVKNKAYSEGKITDRELSAYEFASK 406

Query: 384 -IFNASAHILG----------IEVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSA 428
            + N    I G          +E   E   +   +  EKL+Q     R I  K K F  A
Sbjct: 407 SLLNTMKKIFGLLEDLYPECKVERVVERELEAGQVFDEKLIQILIEARNIARKEKVFKVA 466

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           DYIR +L+  G +LED   P      T+WK++
Sbjct: 467 DYIRDKLKELGIVLED--TPAG----TKWKKR 492


>gi|172054928|ref|YP_001806255.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171701209|gb|ACB54189.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 486

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 185/493 (37%), Positives = 268/493 (54%), Gaps = 68/493 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+  R++  F  + P  + MY CG TVYD+ H+G+AR  I++D++ R L+++  E 
Sbjct: 7   LKIYNSQTRRLEPFVTLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLQWWGYE- 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDIDDKI+ RA+QE  S+      + I+ +  + +  D   L  +     PR
Sbjct: 66  -VTYVQNFTDIDDKILRRAQQEGVSM------ADISQRFIEAYFTDIRPLNVMDADQYPR 118

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-- 180
            T++I  +  LIQ ++   +AY  + ++ F   +   YG  S R     + G   RV   
Sbjct: 119 VTDNISGIQQLIQVLLDKNYAYAVDGDVYFHVEAFGEYGKLSGRSQSMMQAGASGRVAVN 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             EK  KK+P+DF LWK + P EP W SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 179 DLEKTKKKHPSDFALWKSAKPEEPAWHSPWGEGRPGWHIECSAMVRALLGETIDIHGGGG 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+  +  A  W+HNG + + G KMSKS GNF TI ELL      
Sbjct: 239 DLVFPHHENEIAQSEAANG-KPLAKYWLHNGMVTVNGEKMSKSLGNFTTIRELLN----- 292

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
            R     VIRL +L  HYR+P+DFT + ++ A    + W   +  +G+            
Sbjct: 293 -RPLDPMVIRLFVLQAHYRKPLDFTEEAISSA---TNGW--QTLQQGLRFGEKYEDRLGW 346

Query: 347 -----IDPAVL----SALYNDLNTVSAIQALHKLARESTKNHDLL------PIFNAS--- 388
                +D AV+    +A+ +D N+   +  L +LA+   +  +LL      P  + +   
Sbjct: 347 QKNQELDSAVIEQFKAAMDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKNPTDSDNLQR 406

Query: 389 --------AHILGIEVCKE---HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLE 436
                   A ILG+E   E     N+N   A I KL+Q+R    K+K ++ +D +R+QL+
Sbjct: 407 QWQTLVHLAGILGLEAKSEANLEDNQNFDEAEITKLIQQRNEARKVKDYAQSDRLREQLQ 466

Query: 437 SKGFILEDYKNPD 449
            KG  L D+ N +
Sbjct: 467 EKGITLIDHPNGE 479


>gi|168178810|ref|ZP_02613474.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182669931|gb|EDT81907.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 465

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 178/488 (36%), Positives = 261/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEEGSTVKE------LGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLED------T 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 TQGVRWKQ 464


>gi|170754736|ref|YP_001783143.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229558626|sp|B1IGH6|SYC_CLOBK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169119948|gb|ACA43784.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 465

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 263/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 458 -QGVRWKQ 464


>gi|187631649|sp|A2SIM2|SYC_METPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 185/467 (39%), Positives = 259/467 (55%), Gaps = 43/467 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++I+NTL R    F  I+P ++RMYVCG T+YD  H+G+AR M+ FDV+ R LR   G 
Sbjct: 2   SLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVS-GL 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRNITDIDDKII+RA +    IPI      +T + T    +D   L    PTH+P
Sbjct: 61  R-VTYVRNITDIDDKIIKRALER--GIPIRQ----LTDEMTAAMHQDIGALGIEPPTHEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT ++  M+ LI+ +  +G AY     ++ +     P YG  S + ID  + G RV   
Sbjct: 114 RATEYVGAMVGLIEVLERNGLAYRVPGGDVNYSVRKFPGYGRLSGKSIDALRAGERVAVL 173

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K +P DF+LWK + P EP    +++P+G GRPGWHIECSAMS   LG+ FDIHGGG+D
Sbjct: 174 EGKDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGGGMD 233

Query: 240 LIFPHHENEIAQSCCADRIEKT---ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           L FPHHENEIAQS  A  +       N+W+HNGFLN++  KMSKS GNF TI ++L  K+
Sbjct: 234 LQFPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDIL--KR 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---- 352
           + G +     IR  ML  HYR P +F+   L +A   L +   T+     + PA +    
Sbjct: 292 YDGET-----IRFFMLRVHYRSPFNFSDAGLDDARSGLRRL-YTALEGTAVAPAEIDWTD 345

Query: 353 -------SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIEVCKEH 400
                  +A+ +D NT  A+  L  LA E     S ++  LL     +  +L  E   ++
Sbjct: 346 PHAARFKAAMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAA-QY 404

Query: 401 LNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L     +    IE  +  R      + F+ +D IR  L ++G +L+D
Sbjct: 405 LQGGSGVDTGHIEAQIAARAAAKAARDFAESDRIRDALAAQGIVLKD 451


>gi|302552341|ref|ZP_07304683.1| cysteinyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302469959|gb|EFL33052.1| cysteinyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 477

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 253/471 (53%), Gaps = 52/471 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   + 
Sbjct: 16  IRLYDTSARQIRDFTPLQPGCVSIYLCGATVQAAPHIGHIRSGLNFDILRRWFAYRGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII ++  +      N     I  +N + F      L CL PT++PR
Sbjct: 75  -VTFVRNVTDIDDKIIAKSADQ------NRPWWAIGYENERAFNDGYDALGCLPPTYEPR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-- 182
           AT HI +MI +++ +I  GHAY A+  + FD  S P Y + S + ID+     R P++  
Sbjct: 128 ATGHITEMIEMMRGLIERGHAYVADGSVYFDVRSFPEYLALSNQDIDD----LRQPDEGV 183

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+F
Sbjct: 184 SGKRDPRDFAMWKATKPGEPDWETPWGRGRPGWHLECSAMAHKYLGTAFDIHGGGLDLVF 243

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 244 PHHENEIAQAKAYG--DDFAQYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 294

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK-GIIDP------AVL 352
              V+R  +   HYR  I+++ + L EAE   ++   + Q    K G+++P      A  
Sbjct: 295 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGVVEPAPEVPLAFA 354

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH--- 400
            A+ +DL    A+  +H   R+                L    A   +LG++   EH   
Sbjct: 355 EAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEHWAG 414

Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  L+  +   +  ++ +R      K + +AD IR QL   G ++ED
Sbjct: 415 ESDRGDDLHGVVDTLVRMVLDQREAARARKDWPTADAIRDQLSQSGLVIED 465


>gi|323483933|ref|ZP_08089308.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
           WAL-14163]
 gi|323693471|ref|ZP_08107680.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323402771|gb|EGA95094.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
           WAL-14163]
 gi|323502478|gb|EGB18331.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 468

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 179/477 (37%), Positives = 250/477 (52%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R   EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRTKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E       DA   I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGV-----DA-DTISKRYIEECKKDMAMMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +IQ++I  GHAY   +  + F T S   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMLDMIQDLIDKGHAYTGKDGTVYFRTKSFKEYGKLSHKNLEDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG   DIH GG DL
Sbjct: 173 GEEDKEDPTDFVLWKPKKDGEPYWESPWCNGRPGWHIECSVMSKKYLGDSIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  ++  +  A  W+HN FLN++ RKMSKS GNF T+ E+ E       
Sbjct: 233 VFPHHENEIAQSEASNG-KTFAKYWMHNAFLNIDNRKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ-----------------------RLTEAEILLSKW 337
            +   V+R  ML  HYR P++F+ +                       +  E E+  S+ 
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEASKNGLERILTAVEKLNDALKAAEGELTESEK 344

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
              +++K  +     +++ +D NT  AI A+ +L + S               L      
Sbjct: 345 ENITSAKEFVQK-FEASMDDDFNTADAISAVFELVKFSNTTASENSSKAYLSWLKETIEK 403

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +LGI    E   + +   IE ++ +R    K K F+ AD IR +L   G +LED
Sbjct: 404 LCDVLGI--ITEKKEEILDSEIEDMIAQRQQARKDKNFALADEIRGKLLEMGIVLED 458


>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 465

 Score =  300 bits (767), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 173/471 (36%), Positives = 250/471 (53%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF  ++ + + +Y CGPTVYDF H+GNAR  I FDV+   L+Y   E 
Sbjct: 1   MRIYNTLTRRKEEFIPLNGNKVTIYTCGPTVYDFFHVGNARVFITFDVIRNYLKYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA +E  ++        +  +  +++ KD   L        PR
Sbjct: 60  -VKFVQNFTDIDDKMIKRANEEGVTV------KELGDRFIKEYFKDADALNIKRADVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AYE   ++ F     P YG  S + ++E + G RV     
Sbjct: 113 ATEHIEDIIEFIKVLIEKGYAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEPGEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK   P EP W SPWG GRPGWHIECSAM+  +LG+  DIHGGG DLIFPH
Sbjct: 173 KKDPIDFALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS  A   +  A  ++H G+LN+   KMSKS GNF T+ ++L       + +  
Sbjct: 233 HENEVAQS-EAFTGKPFARFFMHVGYLNINNEKMSKSLGNFFTVRDIL-------KEYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R  ML +HYR PI+F+ + L +++  L +      +   ++ A              
Sbjct: 285 EVLRFLMLSSHYRSPINFSRELLDQSKSALERLYNALYAMEHLENAAPERPLNGEEEEYL 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARES----TKNHDLLPIFNASAHILGIEVC 397
                       A+ +D NT  AI  L  + RE      +N     +      +L +   
Sbjct: 345 RRQLENKNKFKDAMDDDFNTAGAIAVLFDMIREFNVSLNENSSREAVKKTKEMVLELGGV 404

Query: 398 KEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +K     +   IE+ ++ER    K K ++ AD IR +L ++G ILED
Sbjct: 405 LGFFSKFEPVLLDEEIEQKIKEREEARKAKNYALADKIRDELRARGIILED 455


>gi|312862597|ref|ZP_07722838.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311101857|gb|EFQ60059.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 447

 Score =  300 bits (767), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 175/473 (36%), Positives = 260/473 (54%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFIPLTENVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +   S         ++ K    F++DT +L     T 
Sbjct: 57  CGYTVNYISNFTDVDDKIIKAANEAGIST------KELSDKFITAFMEDTAQLGIKPATQ 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
            PR  N++ ++I  +  +I  G AY A  ++ F  +   NY   + + +++ ++G     
Sbjct: 111 NPRVINYMDEIIAFVSTLIDKGFAYVAEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRT 170

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG 
Sbjct: 171 DAETDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T   
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV-- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
                   V+R  +    YR+PI+FT + + +AE+ L K+ + + S  + D         
Sbjct: 287 -----DGQVLRFFLATQQYRKPINFTEKAIHDAEVNL-KYLKNTHSLPLTDQVNQDELQT 340

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNK 403
              A   A+ +D NT + +  L  +A+  ++ N+D  +   F     + GI   +E L++
Sbjct: 341 YLDAFQVAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKMLQVFGIVFEEEVLDE 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 401 D----IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 488

 Score =  300 bits (767), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 179/489 (36%), Positives = 258/489 (52%), Gaps = 68/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++NTL  +       +P  +R+YVCGPTVY + HIGNAR    FDV+ R LRY  G +
Sbjct: 6   IALFNTLTMQKEPLVTAEPGVVRLYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYR-GYR 64

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TD+DDKII +A  E    P+      +  +  + F  DT  L  + P   P+
Sbjct: 65  -VHYVRNYTDVDDKII-KAAHETGEEPV-----ALAGRFVKIFQDDTRALHLVEPDVAPK 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+P+++ +I+ ++  G AYE+  ++ F  SS P Y   S+RK+D+   G RV     
Sbjct: 118 VSEHLPEILRIIETLVAKGVAYESQGDVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQ 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF LWK + P EP W+SPWG+GRPGWHIECSAMS+ YLG+ FDIHGG LDLIFPH
Sbjct: 178 KREPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSAKYLGESFDIHGGALDLIFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+H GFL++EG KMSKS GN + + + L           A
Sbjct: 238 HENEIAQSEAASG-KPFAKYWMHCGFLDIEGAKMSKSLGNVVRLRDALTRVD-------A 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGII--DPAV 351
             +R   L THYR P+ F+ + + ++E  L  + +T              +G +  +P  
Sbjct: 290 EALRFFFLSTHYRHPLHFSDKAIADSEYRLEYFYETLRKVDERVGGKDFGQGPLHGEPGR 349

Query: 352 L-----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------------AH 390
                 +A+ +D N   A+ AL  L     +  D  P+ + +                + 
Sbjct: 350 FLQEFEAAMDDDFNCPGALGALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKVSS 409

Query: 391 ILGI--------------EVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQL 435
           +LG+                 KE   + I +A +E+L+ ER    K K F+ AD +R +L
Sbjct: 410 VLGLFEDDPTQWLLRRRDRAVKE---RGIDVAQVERLLSERNEARKSKNFAEADRLRSEL 466

Query: 436 ESKGFILED 444
           + +G  + D
Sbjct: 467 KGQGVEIMD 475


>gi|302024504|ref|ZP_07249715.1| cysteinyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330833540|ref|YP_004402365.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307763|gb|AEB82179.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 447

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 256/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+ N TD+DDKII+ A +   +         ++ K    F +D  +L     T  PR
Sbjct: 61  -VTYISNFTDVDDKIIKAANEAGMTT------KELSDKFIAAFKEDVAKLGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
             +++ ++I  +Q +I  G+AYEA+ ++ F      NY   + + + + + G   RV  E
Sbjct: 114 VIDYMGEIIDFVQVLIDKGYAYEASGDVYFRVEKAENYARLANKTLSDLEAGASGRVEGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS C    +  AN W+HN  LN+   KMSKS GNF+T +++LE        
Sbjct: 234 FPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE-------Q 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R  +   HYR P+++T + +++AEI L     T T   +  +D + L       
Sbjct: 286 IDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAAF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I A+   A+  ++ N+D  +   F     + GI   +E L+      
Sbjct: 346 EAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLEVFGIVFEEEVLDSE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IEALIAERQAARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|16799348|ref|NP_469616.1| cysteinyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|21264012|sp|Q92F36|SYC_LISIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|16412700|emb|CAC95504.1| cysteinyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 471

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 174/476 (36%), Positives = 254/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKATVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT A  W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI------- 346
             VIR  ML  HYR+PI      L +A+  L +            QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARES----TKN-------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +    +K         + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKDIILED 461


>gi|121605784|ref|YP_983113.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|187629840|sp|A1VRB4|SYC_POLNA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120594753|gb|ABM38192.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 463

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 179/470 (38%), Positives = 255/470 (54%), Gaps = 50/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + +F  + P  +RMYVCG T+YD  HIG+AR M+ FDV+ R L+    E 
Sbjct: 3   LRIYNTLSRAVEDFSPLVPGQVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +   +I        +T +      +D   L    PT +PR
Sbjct: 62  -VRYVRNITDIDDKIIKRAVERGITI------RALTDEMIAAMHQDIGALGIEPPTLEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY  ++ ++ +     P YG  S + +DE + G RV    
Sbjct: 115 ATEYVPQMLAMIGKLEEKGLAYRGSSGDMNYAVRKFPGYGKLSGKSLDELRAGERVAVLE 174

Query: 184 HKKNPADFILWKRSTPMEP---GWESP-----WGRGRPGWHIECSAMSSHYLGKVFDIHG 235
            K +P DF+LWK +   EP    W+S      +G+GRPGWHIECSAMS   LG+ FDIHG
Sbjct: 175 GKDDPLDFVLWKSAKESEPEDAKWDSAALGHDYGKGRPGWHIECSAMSCQTLGETFDIHG 234

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHENEIAQS  A+  +  A  W+HNGF+ ++  KMSKS GNF TI ++L+  
Sbjct: 235 GGADLQFPHHENEIAQSEGANG-KPLARFWVHNGFVRVDNEKMSKSLGNFFTIRDVLQ-- 291

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL--- 352
                 + A  IR  ++  HYR  ++++   L +A   L +     T+  ++ PA +   
Sbjct: 292 -----KYDAETIRFFIIRAHYRSALNYSDAHLDDARNSLKR---LYTALALVAPATVEID 343

Query: 353 ----------SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVC 397
                     +A+  D  T  AI  L +LA E  K H      LL    A   +L  E  
Sbjct: 344 WADPFAARFKAAMDEDFGTPEAIAVLFELAGEVNKTHSAERAGLLKSLGACLGLLQGEPS 403

Query: 398 KEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +L     +   AI+ L+ +R    K + F++AD IR +L  +G +L+D
Sbjct: 404 A-YLQAGAGLDDAAIQALITQRADAKKARDFAAADRIRTELLGQGIVLKD 452


>gi|145630616|ref|ZP_01786395.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983742|gb|EDJ91192.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 369

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 151/333 (45%), Positives = 207/333 (62%), Gaps = 17/333 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDTLNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+N +++FD  S   YG  SR+ + + + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLGQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHG-GQYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           A  +R  +L  HYR  ++++ + L  A+  L +
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALER 318


>gi|223933939|ref|ZP_03625899.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897386|gb|EEF63787.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 447

 Score =  299 bits (766), Expect = 5e-79,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 256/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+ N TD+DDKII+ A +   +         ++ K    F +D  +L     T  PR
Sbjct: 61  -VTYISNFTDVDDKIIKAANEAGMTT------KELSDKFIAAFREDVAKLGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
             +++ ++I  +Q +I  G+AYEA+ ++ F      NY   + + + + + G   RV  E
Sbjct: 114 VIDYMDEIIDFVQVLIDKGYAYEASGDVYFRVEKAENYARLANKTLSDLEAGASGRVEGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS C    +  AN W+HN  LN+   KMSKS GNF+T +++LE        
Sbjct: 234 FPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE-------Q 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R  +   HYR P+++T + +++AEI L     T T   +  +D + L       
Sbjct: 286 IDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAAF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I A+   A+  ++ N+D  +   F     + GI   +E L+      
Sbjct: 346 EAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLEVFGIVFEEEVLDSE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IEALIAERQAARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|332359270|gb|EGJ37091.1| cysteine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 447

 Score =  299 bits (766), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  +++++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN-- 357
               V+R      HYR+PI+FT + + +A   L     T      G  D   L A  +  
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDKF 345

Query: 358 ------DLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
                 D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELATQGIKLLDTK---DGVRWTR 446


>gi|153940395|ref|YP_001392856.1| cysteinyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|187629802|sp|A7GJ96|SYC_CLOBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152936291|gb|ABS41789.1| cysteine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320834|gb|ADG01212.1| cysteine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 465

 Score =  299 bits (766), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 263/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINIDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 458 -QGVRWKQ 464


>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 466

 Score =  299 bits (766), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 173/487 (35%), Positives = 259/487 (53%), Gaps = 53/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y  G K
Sbjct: 1   MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E      N  +  +  +   ++ KD   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIKKANEE------NVTVKELGDRFINEYYKDADGLNIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  ++++I  G+AYE + ++ F T     YG  S + +D+ + G R+     
Sbjct: 113 ATEFMDEIISFVKDLIDKGYAYEVDGDVYFSTKKFAEYGKLSGQNLDDLQAGARITVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK   P EP WESPWG+GRPGWHIECS M+   LG   DIH GG DL+FPH
Sbjct: 173 KQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +  AN W+H+ +LN+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARNG-KDFANYWMHSAYLNINNKKMSKSLNNFFTTREILE-------RYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSKW---PQTSTSKGII 347
            VIRL ML  HYR P++F+ + L  A              E LL +      T   K  I
Sbjct: 285 EVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEEMTGVEKEYI 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARE---STKNHDLLPIFNASAHI---LG-- 393
                     +  + +D NT  AI  +  L +E            + N S  +   LG  
Sbjct: 345 KVLNSYKEKYIEKMDDDFNTADAIAVIFDLIKEINTHVNTDSSKELVNYSLELIRELGMP 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + + ++    +++  IE L+++R    K + ++ AD IR  L+++G +LED        +
Sbjct: 405 LGILQKSTIVDLNAEIEGLIEQRQKARKDRDWALADKIRDDLKARGIVLED------TAQ 458

Query: 454 MTRWKQK 460
             RWK++
Sbjct: 459 GVRWKKE 465


>gi|126641281|ref|YP_001084265.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 447

 Score =  299 bits (766), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 180/454 (39%), Positives = 260/454 (57%), Gaps = 51/454 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD+ HIG+AR M+ FD + R LR   G K V Y+RNITDIDDKII+RA +  
Sbjct: 1   MYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQ-GWK-VRYIRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 + I  +T++      +D   L CLAP   P+AT +I QM  +I N++  G AY 
Sbjct: 58  -----GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYP 112

Query: 148 ANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKYHKKNPADFILWKRSTPMEPGW 204
           A+N ++ F+ +    YG  S RK+++ + G   RV  +  KK+P DF+LWK +   EP W
Sbjct: 113 ASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FPHHENEIAQS  A   E+  N 
Sbjct: 173 ASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQS-EASTGEQYVNY 231

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+H GF+N++G KMSKS GNF TI +++E        +   VIR  ++ +HYR P++F+ 
Sbjct: 232 WMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFHPEVIRYFIVSSHYRSPVNFSD 284

Query: 325 QRLTEAEILLSKWPQT---------STSKGIIDPAVL----SALYNDLNTVSAIQALHKL 371
             L EA+  L+++  +          T+   +D + +    +A+ +D NT  A+  L +L
Sbjct: 285 VALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNAMCDDFNTAEAMAVLFEL 344

Query: 372 ARE-----STKNHDLLPIFNAS----AHILGI------EVCKEHLNKNI----SIAIEKL 412
            +E       +  D   +  ++     +ILG+      +  K  + ++        IE  
Sbjct: 345 NKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKSDIGQDALALSDAEIEDF 404

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +Q+R+   K K F+ AD IR+ L  +G +LED +
Sbjct: 405 IQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR 438


>gi|171778429|ref|ZP_02919587.1| hypothetical protein STRINF_00438 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282830|gb|EDT48254.1| hypothetical protein STRINF_00438 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 448

 Score =  299 bits (765), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 174/469 (37%), Positives = 262/469 (55%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y  G K
Sbjct: 3   IKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A                + K    F++D   L     T  PR
Sbjct: 62  -VNYISNFTDVDDKIIKGAAAAGMDT------KAFSDKFIAAFMEDVKELGVEPATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
             +++ ++I  +++++  G AYEAN ++ F  +   NY   + + +++ ++G   RV  E
Sbjct: 115 VIDYMDEIIAFVKDLVDKGFAYEANGDVYFRVAKSKNYAKLANKTLEDLEVGASGRVDGE 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG+GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 175 GDIKENPLDFALWKAAKPGEVSWKSPWGQGRPGWHIECSVMATSILGDTIDIHGGGADLE 234

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T      
Sbjct: 235 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVL------ 352
                V+R  +    YR+P++FT + + +A + L     T T      +D A L      
Sbjct: 288 --DGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLGEAVDSAELEKFKAD 345

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHDLLP--IFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + I  +  +A+  ++ N+D +    F     + G+   +E L+ +   
Sbjct: 346 FEAAMDDDFNTANGITVVFDMAKWINSGNYDQVTKDTFAKILAVFGVVFEEEVLDAD--- 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE LV++R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 403 -IEALVEKRQEARANRDFATADAIRDQLAAQGIKLLDTK---DGVRWTR 447


>gi|254831936|ref|ZP_05236591.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 471

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 172/476 (36%), Positives = 252/476 (52%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQMISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI------- 346
             VIR  ML  HYR+PI             ++RL  A   +    QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +               + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG ++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGFKLENTQSDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166200137|sp|A4JFD0|SYC_BURVG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 465

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 176/472 (37%), Positives = 253/472 (53%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITD+DDKII RA      +   ++I  +T +       D   L    P  +
Sbjct: 61  YR-VTYVRNITDVDDKIIRRA------VENGESIKSLTDRFIGAMHDDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A++ ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D+NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PYAQRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  H     +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQGAGSAHAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALED 454


>gi|313639766|gb|EFS04515.1| cysteinyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 471

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 175/476 (36%), Positives = 254/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIKAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S + + E + G RV     
Sbjct: 115 VTENMDEIIQLITTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DLIFPH
Sbjct: 175 KQDELDFTLWKAAKPDEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI------- 346
             VIR  ML  HYR+PI             ++RL  A   +    QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARES----TKN-------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +    +K         + L +    
Sbjct: 346 WLEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++            +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLEYTQTESLADSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
          Length = 606

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 160/372 (43%), Positives = 212/372 (56%), Gaps = 42/372 (11%)

Query: 3   KKIKIYNTLERKITEFQ--AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +++ ++NTL R+   F+  A   + + MYVCG TVYD++HIG+AR  + FDV+YRLLR+ 
Sbjct: 72  RELLLHNTLTRQKEVFRPRADQGNRVSMYVCGVTVYDYSHIGHARAYVAFDVIYRLLRHL 131

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VTYVRN TD+DDKII RA       P+  A   I      +F  D   L CL P 
Sbjct: 132 --GYAVTYVRNFTDVDDKIIARAAAAGEE-PLALARRFIA-----EFHADMELLGCLPPD 183

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT +IP M+ +IQ II HGHAY    ++ FD +S+P YG  S R  ++ + G RV 
Sbjct: 184 LEPRATEYIPHMVAMIQRIIDHGHAYAVGGDVFFDVASLPGYGRLSGRSQEDNRAGERVA 243

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+  ADF LWK + P EP WESPWG GRPGWHIECSAM    LG+V DIHGGG DL
Sbjct: 244 VDERKRGAADFALWKAAKPGEPTWESPWGPGRPGWHIECSAMIREVLGEVIDIHGGGRDL 303

Query: 241 IFPHHENEIAQ--------SCCADRI-----------------EKTANIWIHNGFLNLEG 275
           +FPHHENE+AQ        SC  D                   ++    W+HNGF+N++ 
Sbjct: 304 VFPHHENELAQSRAASGACSCGHDHGAATASASASNGSGGGGQDEFVRYWLHNGFVNVDS 363

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GNF TI E++         +    +R  ++ T YR+PI++T + L EA   + 
Sbjct: 364 EKMSKSLGNFFTIREVVA-------QYHPRALRWFLVGTQYRQPINYTQRALEEASDRVF 416

Query: 336 KWPQTSTSKGII 347
              QT    G +
Sbjct: 417 YLYQTLADMGAV 428


>gi|296877283|ref|ZP_06901323.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431803|gb|EFH17610.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 447

 Score =  299 bits (765), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 176/466 (37%), Positives = 248/466 (53%), Gaps = 35/466 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I   +AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMDDIIRFVADLIEKDYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKTID---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +DPA L      
Sbjct: 288 ---GQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLEGFVDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
             +A+  D+N  + I  + +LA+     H    + +A   +L        + + +   IE
Sbjct: 345 FIAAMDEDINAANGITVVFELAKWINSGHYNQDVKDALTKML-EVFGVVFVEEVLDADIE 403

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            L+ ER      K F+ AD IR +L ++G  L D K    G R TR
Sbjct: 404 ALIAERQEARAKKDFARADAIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|319943420|ref|ZP_08017702.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743235|gb|EFV95640.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 506

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 185/527 (35%), Positives = 263/527 (49%), Gaps = 89/527 (16%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + +K+YN+L R+  +FQ ++   + +YVCG TVYD+ HIG+AR ++ FDV+ R LR  
Sbjct: 1   MARTLKLYNSLTRRKEDFQPLEAGRVGLYVCGMTVYDYCHIGHARMLVAFDVVQRWLRAR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  VTYVRNITDIDDKII RA      +   + +S +T +      +D   L    P 
Sbjct: 61  GYQ--VTYVRNITDIDDKIIRRA------VENGETLSSLTGRFIAAMHEDEAALGIQRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +PRAT ++PQM+ L+  +  +G+AY + + + +F       YG    + +D+ + G RV
Sbjct: 113 LEPRATQYVPQMLDLVSLLEKNGYAYRSGDGDTLFRVRRFAGYGRLGGKSLDDLRAGERV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K++P DF+LWK + P EP    W+ P+G GRPGWH+ECSAMS+  LG+ FDIHGG
Sbjct: 173 AVAAGKEDPFDFVLWKAAKPEEPAEACWQGPFGPGRPGWHLECSAMSTRLLGRQFDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANI---WIHNGFLNLEGRKMSKSNGNFITINELLE 293
           G DL FPHHENEIAQS  A   E   +    W+HNGF+ ++G KMSKS GNF TI ++L 
Sbjct: 233 GADLQFPHHENEIAQSDAAYFPEGGKSFVRYWLHNGFVQVDGEKMSKSLGNFFTIRDVL- 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE--------ILLSKWPQTSTS-- 343
            KKF G      VIR  ++ +HYR  ++++   L +A          L + WP       
Sbjct: 292 -KKFDGE-----VIRFFIVRSHYRSQVNYSDAGLDDARESLLRLYNALSTDWPAAQAQVE 345

Query: 344 ------------------------------KGIID---PAVL---SALYNDLNTVSAIQA 367
                                            ID   P  +    A+ +D NT  A+  
Sbjct: 346 GQAGQGAAVSAGAGQAAAAACADGEAARAAVAAIDWSEPRAMRFAEAMDDDFNTPVAVSV 405

Query: 368 LHKLARESTKNHD---------------LLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
           L +LA +  +  D               LL     +    G+     H       AI+ L
Sbjct: 406 LFELATDLNRTRDPAIERQLRGLAAVLGLLGQDPVAVRRNGLRGAAAHEGDLDDNAIQAL 465

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           V  RL   K + F+ AD IR+QL   G  LED      G   T W++
Sbjct: 466 VDARLAARKARNFAEADAIRQQLAEAGITLED------GPAGTTWRR 506


>gi|149002271|ref|ZP_01827213.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237650136|ref|ZP_04524388.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821667|ref|ZP_04597512.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147759586|gb|EDK66577.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 447

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 179/468 (38%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E  + P       +  K    F +D   L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREEGVT-PQE-----VADKYIAAFREDVAALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  ++++I    AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKDFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +AE  L     T      G +D   L       
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---HILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + ++A+     +    +  A A    I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLDAE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTK---DGVRWTR 446


>gi|322517683|ref|ZP_08070546.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322123671|gb|EFX95263.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 447

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 173/473 (36%), Positives = 260/473 (54%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MY+CGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENVVNMYICGPTVYNYIHIGNARSAVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +   S         ++ K    F++DT +L     T 
Sbjct: 57  CGYTVNYISNFTDVDDKIIKAANEAGIST------KELSDKFITAFMEDTAQLGIKPATQ 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
            PR  N++ ++I  +  +I  G AY A  ++ F  +   NY   + + +++ ++G     
Sbjct: 111 NPRVINYMDEIIAFVSTLIDKGFAYVAEGDVYFQVAKSKNYAKLANKTLEDLEIGASGRT 170

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG 
Sbjct: 171 DAETDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGNTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T   
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV-- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
                   V+R  +    YR+PI+FT + + +AE+ L K+ + + S  + D         
Sbjct: 287 -----DGQVLRFFLATQQYRKPINFTEKAIHDAEVNL-KYLKNTHSLPLTDQVNQDELQT 340

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNK 403
              A   A+ +D NT + +  L  +A+  ++ N+D  +   F     + GI   +E L++
Sbjct: 341 YLDAFQVAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKMLQVFGIVFEEEVLDE 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IEKL++ER      K F++AD IR +L ++G  L D +    G R TR
Sbjct: 401 D----IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTR---EGVRWTR 446


>gi|322392299|ref|ZP_08065760.1| cysteine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144834|gb|EFX40234.1| cysteine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 447

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 175/467 (37%), Positives = 251/467 (53%), Gaps = 37/467 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWNSPWGPGRPGWHIECSVMSTEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKTID---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------ 352
                V+R      HYR+PI+FT + + +AE  L     T      G +D   L      
Sbjct: 288 ---GQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDAGELQAFKDK 344

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
             +A+  D NT + I  + ++A+  ++ N+D       +A +         + + +   I
Sbjct: 345 FVAAMDEDFNTANGITVVFEMAKWINSGNYDAAVKETLAAMLE--VFGVVFVEEVLDEEI 402

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           E L+Q+R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 403 EALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|301299859|ref|ZP_07206093.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852530|gb|EFK80180.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 470

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 265/491 (53%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +  +F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A QE     +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKII-KASQE-----MNLSVKEITEKFINAFYEDTSALNVKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEK 182
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID  EQ   +RV + 
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 183 YHKKN--PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              K   P DF LWK++   E  W+SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQS-EAKTGKKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE----STKN-------HDLLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++    S K        ++L+  +   
Sbjct: 346 VEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IE+L+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFSEEK--ELLDDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILED---- 459

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 460 --TAQGTRWKR 468


>gi|167586800|ref|ZP_02379188.1| cysteinyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 407

 Score =  299 bits (765), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 165/393 (41%), Positives = 231/393 (58%), Gaps = 32/393 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAV-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIAAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+AN+ ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATHFIPQMLGMIETLEANGYAYQANDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W+S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWDSKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N WIHNGF+ ++  KMSKS GNF TI ++LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWIHNGFVQVDNEKMSKSLGNFFTIRDVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++   T+      D A L      
Sbjct: 288 --QYDAEVVRFFIVRTHYRSPLNYSDVHLDDARAALTRL-YTALKDVAPDAAALDWNEPH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD 380
                +A+ +D NT  A+  L +LA E  +  D
Sbjct: 345 AQRFAAAMNDDFNTSLAVSVLFELAGEVNRTRD 377


>gi|320547739|ref|ZP_08042023.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447499|gb|EFW88258.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 448

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 174/469 (37%), Positives = 260/469 (55%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y  G K
Sbjct: 3   IKIYDTMTRSLREFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYC-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D   L     T  PR
Sbjct: 62  -VNYISNFTDVDDKIIKGAAEAGMDT------KAFSDKFIAAFMEDVKELGVEPATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
              ++ ++I  +++++  G AYEAN ++ F  +   NY   + + +++ ++G   RV  E
Sbjct: 115 VIEYMDEIIAFVKDLVDKGFAYEANGDVYFRVAKSKNYAKLANKTLEDLEVGASGRVDGE 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG+GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 175 GDIKENPLDFALWKSAKPGEVSWQSPWGQGRPGWHIECSVMATSILGDTIDIHGGGADLE 234

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T      
Sbjct: 235 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVL------ 352
                V+R  +    YR+P++FT + + +A + L     T T     + D A L      
Sbjct: 288 --DGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPVGEVADAAELAKFKDD 345

Query: 353 --SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + I  +  +A+  ++ N+D  +   F     + GI   +E L+ +   
Sbjct: 346 FETAMDDDFNTANGITVIFDMAKWINSGNYDQTVKDTFAKMLAVFGIVFEEEVLDAD--- 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +E L+ +R      + F++AD IR QL  +G  L D K   +G R TR
Sbjct: 403 -VEALIAKRQEARANRDFATADAIRDQLAVQGIKLLDTK---DGVRWTR 447


>gi|317486410|ref|ZP_07945237.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922320|gb|EFV43579.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 485

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 182/494 (36%), Positives = 255/494 (51%), Gaps = 73/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNT+ RK   F  +    + +Y CG T Y  +HIG+AR  + FD+L RLLRY   E 
Sbjct: 1   MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII+RA  E  S       + I     + + +D  RL  +    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKRANDEGVSS------TEIAETYIKAYHEDMDRLGVIRADIEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +M+ L + +I  G AY   + ++ F   S P YG  S R  D+ + G RV    
Sbjct: 113 ATEHIQEMLNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  Y+    DIHGGGLDLIFP
Sbjct: 173 EKEDPLDFALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +  ANIW+HNGF+ ++  KMSKS GNF TI ++LE       S+ 
Sbjct: 233 HHENEIAQTEAA-LGKPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILE-------SYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----------------ILLSKWPQTSTSKGII 347
           A  +R  +   HYR PIDF++  + E+E                +    W   +    ++
Sbjct: 285 AETLRYFLAGKHYRSPIDFSLDNMDESERSQKRVYECLREVDKALARENWKPGAAPAELV 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLA------------RESTKNHDLLPIF-NAS 388
                 D + + AL +D+NT +A+  L  +             R S    D+L  F +A+
Sbjct: 345 EELKQQDQSFMDALEDDVNTAAAMGHLFNMVRIAGRVLEDKKLRNSEGGRDILRAFRDAT 404

Query: 389 AH---ILG---------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
           A    +LG               I   +  L+ N    +  L++ER      K F+ +D 
Sbjct: 405 AKWDTLLGLFAQKPEGFLASLREIRARRRGLDMN---KVAGLLRERQEARAAKDFARSDA 461

Query: 431 IRKQLESKGFILED 444
            R +L + G  + D
Sbjct: 462 ARDELAALGVEVRD 475


>gi|300864454|ref|ZP_07109324.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337549|emb|CBN54472.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 483

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 184/490 (37%), Positives = 252/490 (51%), Gaps = 66/490 (13%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YN+L R++   + I+P  +RMY CG TVYD  H+G+AR  I +DV+ R L +   E  
Sbjct: 4   KLYNSLTRRVEPLETIEPGKVRMYCCGVTVYDNCHLGHARSYIAWDVVRRYLTWRGYE-- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V YV+N TDIDDKI+ RAR+E  S+        +  + TQ + +D  RL  L     PRA
Sbjct: 62  VRYVQNFTDIDDKILNRARKEGSSM------EEVAERYTQTYFEDMKRLNVLEADEYPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV---- 179
           T+ +  +  LI  +   G+AY +  ++ +       YG  S RK DE + G   RV    
Sbjct: 116 THTMDGIKRLIHELESKGYAYASGGDVYYKVRQFSEYGKLSGRKFDEMQAGASGRVESED 175

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   KK+P DF LWK +   EP W+SPWG GRPGWHIECSAM     G   DIHGGG D
Sbjct: 176 AEAQKKKDPFDFALWKGAKSGEPAWDSPWGSGRPGWHIECSAMVRQSFGDRIDIHGGGSD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS      +  A  W+HNG + + G KMSKS GNFITI ELL+      
Sbjct: 236 LIFPHHENEIAQSEAVTG-QPLATYWLHNGMVKVNGEKMSKSLGNFITIRELLD------ 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLS-------KWPQTSTS 343
           +     V+RL +L  HYR+PIDFT   +  A+          L          W      
Sbjct: 289 KPTDPMVVRLFVLTAHYRKPIDFTDDAIASAQNGWNTINEGFLFGHEYGSQFGWKLALED 348

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           K  +     SA+ +D NT +A+  + +LA+E  ++ ++L I        G EV ++  + 
Sbjct: 349 KEAVQ-QFQSAMDDDFNTPNALAVVFELAKELRRDRNIL-IHGGKIETPG-EVIQQKWHT 405

Query: 404 NISIA--------------------------IEKLVQERLILLKMKKFSSADYIRKQLES 437
            +S+                           IE L+Q+RL   K K F+  D IR +L+ 
Sbjct: 406 LVSLLHVLGLTNLVPASATLSADQSGLTDKDIEILIQQRLAARKAKNFAEGDRIRNELKD 465

Query: 438 KGFILEDYKN 447
           +G  L D K+
Sbjct: 466 RGITLIDQKD 475


>gi|227891227|ref|ZP_04009032.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867101|gb|EEJ74522.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 470

 Score =  298 bits (764), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 265/491 (53%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +  +F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A QE     +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKII-KASQE-----MNLSVKEITEKFINAFYEDTSALNVKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEK 182
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID  EQ   +RV + 
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 183 YHKKN--PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              K   P DF LWK++   E  W+SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQS-EAKTGKKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE----STKN-------HDLLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++    S K        ++L+  +   
Sbjct: 346 VEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IE+L+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFSEEK--ELLGDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILED---- 459

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 460 --TAQGTRWKR 468


>gi|299541906|ref|ZP_07052229.1| cysteinyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298725644|gb|EFI66285.1| cysteinyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 466

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 177/488 (36%), Positives = 261/488 (53%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R  +Y   + 
Sbjct: 3   IQIFNSLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII+ A +      + + +  +T +    + +D T L C      PR
Sbjct: 62  -VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +I  IQ +I  G+AYE+  ++ + T     YG  S + +D+ K+G R+     
Sbjct: 115 VTEHMDDIIQFIQVLIEKGYAYESAGDVYYRTRKFDGYGKLSHQSVDDLKIGARIEAGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +  DF LWK + P E  W+SPWG GRPGWHIECS M+  +LG   DIH GG DL FPH
Sbjct: 175 KDDALDFALWKAAKPGEIFWQSPWGDGRPGWHIECSVMAREHLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS   +  +KT A  W+HNG++N++  KMSKS GNFI +N++        +   
Sbjct: 235 HENEIAQSEAHN--DKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIR-------KQID 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             ++R  ML  HYR PI+F           ++R+  A   +     T+ S G      L+
Sbjct: 286 PQILRFFMLSVHYRHPINFAKDLVEAAASGLERIRTAYNNVKHRLTTTVSLGDHSEEWLN 345

Query: 354 -----------ALYNDLNTVSAIQALHKLAR-----ESTKN------HDLLPIFNASAHI 391
                      A+ +D NT +AI  L ++AR      S  N         +  F     +
Sbjct: 346 KITEQKAHFEEAMDDDFNTANAISVLFEVARIANIYLSEANTCKKVLETFIETFEVLGDV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGIE  K    + +   IE L+QER+   K + F+ +D IR  L+++G ILED +     
Sbjct: 406 LGIEFAK--EEELLDEEIEALLQERVEARKNRDFARSDEIRDHLQAQGIILEDTRQG--- 460

Query: 452 QRMTRWKQ 459
              TRWK+
Sbjct: 461 ---TRWKR 465


>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511829|sp|C4XSW5|SYC_DESMR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 485

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 251/491 (51%), Gaps = 67/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ R    F +  P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII++A  E  +         I  +    F +D  +L  L P  +P+
Sbjct: 60  -VTFVRNFTDVDDKIIKKANAEGTTS------QEIAERYIATFYEDMDKLGILRPNAEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I +M  L Q +I  GHAY   + ++ F   S   YG  S R +++ + G RV    
Sbjct: 113 ATEYIGEMASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP WESP+G GRPGWH+ECSAMS   LG   DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E     W+HNGF+ +   KMSKS GNFITI ++        R  P
Sbjct: 233 HHENEIAQSEAAIGGE-FCRYWVHNGFVRINTEKMSKSLGNFITIRDIY------ARYLP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----------------ILLSKWPQTSTSKGII 347
             V+R  +L + YR P+D++ Q L EAE                +  +KW +T     + 
Sbjct: 286 -EVLRFFLLSSQYRSPLDYSDQGLDEAEKGIKRIYAAKVQMEQALGRAKWSETKLPADVT 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                 +    +A+ +DLNT  A+  +  L R + +  +                +L  F
Sbjct: 345 EELSRHEEGFTAAMDDDLNTAQAMGHVFGLVRLAGRLMEDKTLAKSRETAEVLGRILADF 404

Query: 386 NASAHILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
              A +LG+            + C+       +  ++ LV ER    K K F+ +D IR 
Sbjct: 405 GVWAEVLGVFGTDATAFLADLKACRLTRLGIDAARVDGLVAERQDARKAKDFARSDAIRD 464

Query: 434 QLESKGFILED 444
           +L S G  + D
Sbjct: 465 ELASLGVTVMD 475


>gi|226950955|ref|YP_002806046.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254781234|sp|C1FMX3|SYC_CLOBJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226842951|gb|ACO85617.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 465

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 262/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEEGSTVKE------LGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKSALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 458 -QGVRWKQ 464


>gi|295702329|ref|YP_003595404.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799988|gb|ADF37054.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 465

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 170/487 (34%), Positives = 255/487 (52%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL R+   F  ++ + ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IKLYNTLTRQKETFVPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A++    +P       I ++    + +DT+ L C      PR
Sbjct: 62  -VEYVSNFTDVDDKLIKAAKELGEDVPT------IANRFIDAYFEDTSALGCKHADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I  ++   +AYE+  ++ + T     YG  S + IDE + G R+     
Sbjct: 115 VTENMDIIIEFIDELVKKEYAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFT---------------------VQRLTEAEILLSKWPQTSTS 343
            ++R  +L  HYR PI++                        RL  A  L     +    
Sbjct: 287 SLLRFFILSVHYRHPINYNEEILENTRKGFERLQTAYGNLTHRLEAATNLQEDASEWFEK 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPI----FNASAHIL 392
              +    +  + +D NT +AI  L +LA+       E T + D++      F      +
Sbjct: 347 LKELRETFVEEMDDDFNTANAISVLFELAKQANLYLLEQTTSTDVIEAFIKEFKELGTAI 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI   +  L   +   I++L+Q+R+   K + F  AD IR +L++K  ILED        
Sbjct: 407 GITFGEAEL---LDEEIDQLIQDRIQARKDRNFQLADQIRDELKAKNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|118576528|ref|YP_876271.1| cysteinyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195049|gb|ABK77967.1| cysteinyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 455

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 183/456 (40%), Positives = 250/456 (54%), Gaps = 39/456 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++TL+ K  E +A D + I  Y+CG TVYD AHIG+AR +IVFDVL R L     E 
Sbjct: 1   MRIHDTLDGKKKEVRA-DKAGI--YLCGVTVYDEAHIGHARTIIVFDVLRRHLESRGTE- 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TD+DDKIIERAR E  S         ++++  + +  +  RL     +  P 
Sbjct: 57  -VRLVQNFTDVDDKIIERARSEGTSA------QELSARYIRAYHAEFGRLGVRRASEYPL 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+++ LI++++  G AY A N + F  S  P YGS SR        G RV     
Sbjct: 110 ATEHMPEILELIKSLVGSGSAYAAPNGVYFSVSGFPRYGSLSR-NTGGLISGARVGIDAG 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S   +P WESPWGRGRPGWHIECSAM   YLG+ F+IHGGG DLIFPH
Sbjct: 169 KRDPTDFALWKLSRG-DPSWESPWGRGRPGWHIECSAMCLKYLGETFEIHGGGRDLIFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS  A    + A IW+H G + ++G KMSKS GN  ++  LLE        W  
Sbjct: 228 HENEMAQS-EAHTGRRLAKIWMHVGMVTIDGEKMSKSLGNMKSVRFLLE-------RWSP 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------WPQTSTSKGIIDPAV 351
             +R+  +  HY +P+D++ + L E E    +              P    + G +    
Sbjct: 280 GAMRIFCIAGHYSKPVDYSEELLEEHETFWERARLAYHVLVQGKPAPGGDDTAGRLWAEF 339

Query: 352 LSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +AL +DLNT  A+ A   L        K+ +LL IF+A   +LG+E+    L       
Sbjct: 340 GNALDDDLNTHLALDAFRSLVSYCLGGPKDSELLRIFDAMLGVLGLEIPV--LTGGERTR 397

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +E L+ ER  L     +  AD+IR  L SKG  L+D
Sbjct: 398 VEGLISERARLRGNGLYDEADHIRDNLASKGITLQD 433


>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 485

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 178/494 (36%), Positives = 253/494 (51%), Gaps = 73/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L RK  EF  + P ++ MYVCG T YD+ HIG+AR  +VFDVL R LRY   + 
Sbjct: 1   MQIYNSLTRKKEEFIPLKPGHVSMYVCGITAYDYCHIGHARSAVVFDVLVRYLRYIGMQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA +E            I       F  D  RL  L    +P+
Sbjct: 60  -VTFVRNFTDVDDKIINRANREGTDF------ESIARSYIDAFYTDMDRLGILRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L +N+I   HAY   + ++ F   S  +YG  S R I++   G R+    
Sbjct: 113 ATEHIKEMIELCENLIAKKHAYSTPSGDVYFRVRSYADYGKLSGRNIEDLMSGARIEPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS  YL   FDIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKGAKPGEPSWPSPWGPGRPGWHIECSAMSERYLPLPFDIHGGGQDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+  A   ++    W+HNGF+ +   KMSKS  NF+TI ++L        ++ 
Sbjct: 233 HHENERAQTEAATD-KQFVRYWVHNGFVQINSEKMSKSLNNFVTIRDILA-------NYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGII 347
             V+R  ++  HYR P+D+T   L E+E  L                +KW  T     I+
Sbjct: 285 PEVLRFFLITKHYRSPLDYTSDALEESERALKRIYLTKTAAEAHVAGTKWTATPLPAEIV 344

Query: 348 DPAVL------SALYNDLNTVSAIQAL------------HKLARESTKNHDL----LPIF 385
             A         ++ +D+NT +A+  +             K  ++S +  D+    L +F
Sbjct: 345 VEATALEAKWDDSMADDMNTAAALGHVFVLMKIVNRILEDKTLKKSEQGRDMIRHALKLF 404

Query: 386 NASAHILGI---------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
                +LG+                V +  ++ ++   ++  +QER      K F+ +D 
Sbjct: 405 ERWGEVLGLFLMPSSDFLTQLKESRVLRRKIDTDL---VQTKLQERKEARAAKDFARSDA 461

Query: 431 IRKQLESKGFILED 444
           IR +L + G  ++D
Sbjct: 462 IRDELLALGVTIQD 475


>gi|89100736|ref|ZP_01173591.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084553|gb|EAR63699.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 465

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 175/487 (35%), Positives = 256/487 (52%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNT+ R+  EF  ++   ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IAIYNTMSRQKEEFIPLEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I  A++    +P       I  +    + +D + L C      PR
Sbjct: 62  -VQYISNFTDVDDKLIRAAKELGEDVPS------IAERFIDAYFEDVSALGCKRADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ +I  G AYE+N ++ F T     YG  S++ IDE ++G R+     
Sbjct: 115 VTESMDLIIQFIEALIEKGFAYESNGDVYFHTRRFDEYGKLSQQSIDELRVGARIAVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDALDFALWKTAKEGEISWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFVLVHDII-------KKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS---------KG 345
            V+R  ML  HYR PI+++          ++R+T +   L+   + S           K 
Sbjct: 287 QVLRFFMLSVHYRHPINYSDELLENTRSGLERITTSYQNLAHRKEASAELTDNNSEWLKK 346

Query: 346 IID--PAVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPI------FNASAHIL 392
           I D     +  + +D NT + I  L +L+R++      KN  +  I      F     +L
Sbjct: 347 IEDLHGEFIKEMDDDFNTANGISVLFELSRQANYYLLEKNTSVEVIEAFMKEFEILFDVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ +  E L   +   I+ L+++R    K + F  +D IR QL+    ILED        
Sbjct: 407 GLSLGGEEL---LDDEIDALIEKRNQARKERNFQLSDQIRDQLKEMNIILEDTAQG---- 459

Query: 453 RMTRWKQ 459
             TRWK+
Sbjct: 460 --TRWKR 464


>gi|328944848|gb|EGG39008.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 447

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 251/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEEGIT-PKE-----VADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID------PAV 351
               V+R      HYR+PI+FT + + +A    + L + + Q  T +   D         
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKVAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L+ ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIDERQEARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|226735052|sp|B8DKL0|SYC_DESVM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 485

 Score =  298 bits (764), Expect = 9e-79,   Method: Compositional matrix adjust.
 Identities = 178/491 (36%), Positives = 246/491 (50%), Gaps = 67/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+   P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ RN TD+DDKII RA QE  +         +  K    F +D  RL  L    +PR
Sbjct: 60  -VTFARNFTDVDDKIITRANQEGLTS------QEVAEKYIATFYEDMDRLNVLRADLEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L   +I    AY   + ++ F   + P YG  S R +D+ + G RV    
Sbjct: 113 ATTHIEEMISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  +L    DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +     W+HNGF+ +   KMSKS GNF TI ++LE       ++ 
Sbjct: 233 HHENEIAQTEAA-LGKDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILE-------NYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGII 347
              +R  +L  HYR PIDFT + + EAE  L                 KW      K + 
Sbjct: 285 PETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRIYEALGLLHAELEREKWTSGPLPKDVT 344

Query: 348 DP------AVLSALYNDLNTVSAIQALHKLARESTKNHD--------------------- 380
           +       A   A+ +D+NT +A+  +  + R + +  D                     
Sbjct: 345 EEFEGLRQAFADAMEDDMNTAAALGHVFTMVRLANRILDNKGQRKTEGARAFFRAVLDEA 404

Query: 381 -----LLPIFN--ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +L +F    +  +  +  C+          +E+L+Q R+     K F+ AD IR 
Sbjct: 405 ATWFAVLGVFGREPAGFLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRD 464

Query: 434 QLESKGFILED 444
           ++ + G  + D
Sbjct: 465 EIAALGIEVRD 475


>gi|320538832|ref|ZP_08038508.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030992|gb|EFW12995.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 461

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 174/482 (36%), Positives = 248/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ ID   + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIDAGKVGMYVCGVTLYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII R+ +        +    +T +   +   D   L    P  +PR
Sbjct: 60  SLNYVRNVTDIDDKIIRRSAEN------AETCDQLTERMLAEMHADFDSLLIERPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I + Q +I   HAY A+N +++F   S P YG  S + +++ + G RV    
Sbjct: 114 ATQHIAEIIAITQRLIDRNHAYVASNGDVMFSIDSDPQYGLLSHQALEQLQAGARVEIDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKHNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGPHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCA-HDGRYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGADADAQPMGGDAFEARFRQA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKE------------- 399
           + +D NT  A   L +LARE    KN D +     +A +  +                  
Sbjct: 346 MDDDFNTPEAYSVLFELAREVNRLKNEDRVAANGMAATLRKLAKVLGLLQQQPEQLLQNG 405

Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +N      IE L+++R    + K ++ AD  R +L     +LED        + T W+
Sbjct: 406 AQVNGGEGAEIEALIKQRNEARETKNWALADVARDRLNEMNIVLED------APQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|301051827|ref|YP_003790038.1| cysteinyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300373996|gb|ADK02900.1| cysteinyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 465

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 263/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K + D
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAD 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 LEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +    + +   IE+L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELAQ---EELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKDRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|156742112|ref|YP_001432241.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156233440|gb|ABU58223.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 478

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 193/494 (39%), Positives = 258/494 (52%), Gaps = 65/494 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R +  F+ ++P  ++MYVCG TVYD AHIG+A   IVFDV+ R L Y     
Sbjct: 3   IRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RA       P   A S I      +F++D   L        PR
Sbjct: 61  AVQHVVNFTDVDDKIINRAHALGRD-PKELAESYIA-----EFLEDLEALNVKRAHIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +P++   I  +I  GHAY  + ++ F  S+ P+YG  SRR +D+   G R+     
Sbjct: 115 ATETMPEIQRFISRLIETGHAYVVDGDVYFRVSTAPDYGKLSRRSLDDMIAGNRIGIDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NPADF LWK + P EP W+SPWG GRPGWHIECSAM+  +LG+  DIHGGG DLIFPH
Sbjct: 175 KENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGTDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGR---------KMSKSNGNFITINELLETK 295
           HENEIAQ+      +  A  W+HNG L ++ R         KMSKS GN +TI E L   
Sbjct: 235 HENEIAQTESLTG-KTFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFL--- 290

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDP 349
               R  P  V+RL +L + YR P+ F  +   + E  L++       P  +   G   P
Sbjct: 291 ---ARYHP-DVLRLTVLSSSYRSPLAFGEEIAADQERKLARLRSALEPPIGTIEAG---P 343

Query: 350 AV--------------LSALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASA-- 389
           AV              ++A+ +D NT  A+ AL  L R      D      P   A A  
Sbjct: 344 AVEVLLAAVRTARERFIAAMDDDFNTAGALAALFDLVRSINTARDAGVGGAPFAEAQATF 403

Query: 390 ----HILGIE-VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                +LG+  +    + +  +  I+ LV+ R  L K K+F+ AD +R +L   G +LED
Sbjct: 404 RELVDVLGLTLIAPRPVTQQAAPFIDLLVEVRSELRKAKQFALADMVRDRLAQLGVMLED 463

Query: 445 YKNPDNGQRMTRWK 458
              P      TRWK
Sbjct: 464 --TPQG----TRWK 471


>gi|241764153|ref|ZP_04762188.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366490|gb|EER60990.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 459

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 178/462 (38%), Positives = 249/462 (53%), Gaps = 38/462 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + +F  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+   G +
Sbjct: 3   LRIYNTLSRALEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKAS-GLR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   +I        +T +      +D   L    P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIRRALERGITI------RQLTDEMIAAMHQDIGALGIEPPAVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ LI  +   G AY A N ++ +       YG  S + +DE + G RV  + 
Sbjct: 115 ATEYVPQMLSLIGQLEGKGLAYRATNGDVNYSVRKFAGYGKLSGKSLDELRAGERVAVQD 174

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 175 GKEDPLDFVLWKSAKPEEPPEAKWDSPFGTGRPGWHIECSAMSCATLGETFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI ++L+       
Sbjct: 235 QFPHHENEIAQSEGATG-KPLAKFWVHNGFVRVDNEKMSKSLGNFFTIRDVLQ------- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVL 352
            + A  +R  ++  HYR  ++++   L +A   L +         P    S    DP   
Sbjct: 287 QYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVAPSEVASIDWADPYAA 346

Query: 353 ---SALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              +A+  D  T  AI  L  LA E   T++  L  +  A A  LG+             
Sbjct: 347 RFKAAMDEDFGTPEAIAVLFDLASEVNKTRSPQLAGLLKALAGCLGLLQGDPQAFLQAGA 406

Query: 408 AIEKLVQERLILLKM-----KKFSSADYIRKQLESKGFILED 444
             ++   +  I  +      K F+ AD IR  L ++G +L+D
Sbjct: 407 GFDEAAIQAQIAARAAAKAGKDFAEADRIRNALLAQGIVLKD 448


>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 472

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 174/496 (35%), Positives = 263/496 (53%), Gaps = 69/496 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y  G 
Sbjct: 6   KMKLFNTMTRQKEEFKPIKDGEVNMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYK-GY 64

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V +++N TDIDDK+I++A +E      N  +  +  +  +++ KD+  L     T  P
Sbjct: 65  K-VNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIEEYYKDSDGLNIKRATVNP 117

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT  + +++  ++++I  G+AY+ + ++ F T     YG  S + +++ + G R+    
Sbjct: 118 RATEFMDEIVAFVKDLIDKGYAYKVDGDVYFSTKKFTEYGKLSGQNLEDLQAGARITVDE 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK   P EP WESPWG+GRPGWHIECS M+   LG   DIH GG DL+FP
Sbjct: 178 RKQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +  +  AN W+H+ +LN+  +KMSKS  NF T  E+LE        + 
Sbjct: 238 HHENEIAQSEARNG-KAFANYWMHSAYLNINNKKMSKSLNNFFTTREILE-------RYD 289

Query: 304 APVIRLAMLMTHYREPIDFT-----------------------------VQRLTEAEILL 334
           A VIRL ML  HYR P++F+                             ++++TE E   
Sbjct: 290 AEVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEKMTEDEKEY 349

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE------STKNHDL----LPI 384
           +K   +   K I        + +D NT  AI  +  L +E      +  + +L    L I
Sbjct: 350 TKVLNSYKEKYI------EKMDDDFNTADAIAVIFDLIKEINTHVNADSSKELVNYSLEI 403

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  LGI      L+ N    IE L+++R    K + ++ AD IR  L+++G +LED
Sbjct: 404 IRELGMPLGILQKSTMLDLNAE--IEGLIEQRQQARKDRNWALADKIRDDLKARGIVLED 461

Query: 445 YKNPDNGQRMTRWKQK 460
              P    +  RWK++
Sbjct: 462 --TP----QGVRWKKE 471


>gi|329936176|ref|ZP_08285969.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
 gi|329304286|gb|EGG48166.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
          Length = 466

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 252/471 (53%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFVPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDILRRWFAYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT+VRN+TDIDDKII + A Q  P   I         +N + F +  T L CL PT++P
Sbjct: 62  -VTFVRNVTDIDDKIITKSADQGRPWWAIG-------YENERAFNEGYTALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +M+ +++ +I  GHAYEA+  + FD  S P Y   S +++D  +  +   E  
Sbjct: 114 RATGHITEMVEMMRTLIERGHAYEADGNVYFDVRSFPGYLELSNQELDNLQQPSSGGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WE+PWG GRPGWH+ECSAM+  YLG  FDIHGGGLDLIFP
Sbjct: 173 GKRDPRDFALWKAAKPGEPTWETPWGPGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQAKAYG--DEFARYWLHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIID------PAVL 352
             V+R  +   HYR  I+++ + L EAE   ++           + G+++      PA  
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRVVELAGGVVEPSAEVPPAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH--- 400
            A+ +DL    A+  +H   R+                L    A   +LG++   E    
Sbjct: 344 EAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEQWAA 403

Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  L+  +   +  ++ +R      K +++AD IR QL   G I+ED
Sbjct: 404 ANDGGEDLHGVVDTLVRMVLDQREAARARKDWTTADAIRDQLGQSGLIIED 454


>gi|289433593|ref|YP_003463465.1| hypothetical protein lse_0224 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169837|emb|CBH26375.1| cysS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 471

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 175/476 (36%), Positives = 254/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIKAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S + + E + G RV     
Sbjct: 115 VTENMDEIIQLINTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DLIFPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI------- 346
             VIR  ML  HYR+PI             ++RL  A   +    QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARES----TKN-------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +    +K         + L +    
Sbjct: 346 WLEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++            +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLEYTQTESLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 461


>gi|312869734|ref|ZP_07729881.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094783|gb|EFQ53080.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 471

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 174/478 (36%), Positives = 258/478 (53%), Gaps = 57/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LKIYNTLTRQKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K  Q F+ DTT +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAHEQGITVPQ------LADKFIQAFMADTTAVNIEPATKHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +IP +I  +Q +I  G+AYE++ ++ +      +YG  S + ID+ ++G        
Sbjct: 114 ATENIPDIIAFVQTLIEKGYAYESDGDVYYRARKFAHYGQLSGQSIDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLG+  DIH GG DL
Sbjct: 174 EIGKKEDPMDFALWKAAKPGEISWDSPWGQGRPGWHIECSVMSTKYLGQTLDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +     W+HNGF+ +  +  KMSKS  NFIT++++++T    
Sbjct: 234 EFPHHENEIAQSEAATG-QPFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDIIKTVD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP 349
                  V+R  M  T YR PI ++   LT+A+  L           + Q   + G  D 
Sbjct: 291 -----PQVLRFFMATTQYRRPIQYSEDNLTDAKNNLEHIQTAYDNLTYRQQDAATG--DD 343

Query: 350 AVL------------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
           A++            +A+ +D+N  + I  +++L + +        +   +         
Sbjct: 344 ALVTQQLADFTARFTTAMDDDINVQNGIAVVYELVKAANTYAQQAAVKQGALQAYKDKLA 403

Query: 391 ----ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               I GI++   H N      I+ L++ER    K K F+ +D IR +L+ +G ILED
Sbjct: 404 QLISIFGIKLVA-HDNHIDDEQIKALIEERNQARKNKDFARSDQIRDELKQQGIILED 460


>gi|90411646|ref|ZP_01219656.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327536|gb|EAS43889.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 464

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 183/485 (37%), Positives = 264/485 (54%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L ++  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTKQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +  KD   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHKDFDALGMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I + + +I  G AY A+N +++F+ S    YG  SR+ +D+ + G RV    
Sbjct: 114 ATEFIAEIITMCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCATG-SQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------GHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +   +     +   A           ++
Sbjct: 286 AESVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGLDLTAQAEGGEEFVTRFTAS 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLP--IFNAS---------AHILGI------E 395
           + +D NT  A   L  + RE    K  + +   I  AS         A ILG+       
Sbjct: 346 MNDDFNTPEAYSVLFDMVREINRLKADETIADNIAQASALGARLRELADILGLLSQDPEA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +    ++    IE L+Q+RL     K +++AD  R +L +   ILED      G + T
Sbjct: 406 FLQGGAGQDDVAEIESLIQQRLDARAAKDWAAADAARDKLLAMKIILED------GPQGT 459

Query: 456 RWKQK 460
            W++K
Sbjct: 460 TWRRK 464


>gi|313620930|gb|EFR92103.1| cysteinyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 471

 Score =  298 bits (764), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 173/476 (36%), Positives = 254/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT A  W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI------- 346
             VIR  ML  HYR+PI             ++RL  A   +    QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARES----TKN-------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +    +K         + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKDIILED 461


>gi|297193591|ref|ZP_06910989.1| cysteinyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297151836|gb|EDY62039.2| cysteinyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 464

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 174/489 (35%), Positives = 260/489 (53%), Gaps = 60/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFAPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIIAKSADQGRPWWSIG-------YENERAFNDGYEALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
           RAT H+ +M+ +++ +I  GHAYEA+  + FD  S P Y + S + ID+     R P++ 
Sbjct: 114 RATGHVTEMVEMMRGLIERGHAYEADGSVYFDVRSFPEYLALSNQDIDD----LRQPDEG 169

Query: 183 -YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGGLDLI
Sbjct: 170 VSGKRDPRDFAMWKSTKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEAFDIHGGGLDLI 229

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+      +  A+ W+HN ++ + G KMSKS GN + + E++       ++
Sbjct: 230 FPHHENEIAQAKAYG--DAFASYWVHNAWVTMSGEKMSKSLGNSVLVAEMV-------KN 280

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK-GIIDPAV------ 351
           W   V+R  +   HYR  I+++ + L EAE   ++   + Q    K G + PA       
Sbjct: 281 WRPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGPVAPAAEVPLAF 340

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH-- 400
             A+ +DL    A+  +H   R+                L    A   +LG++    H  
Sbjct: 341 AEAMDDDLGVPQALAIIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWV 400

Query: 401 --------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                   L+  +   +  ++Q+R      K +++AD IR QL   G ++ED   PD   
Sbjct: 401 GEADRGEDLHGVVDTLVRLVLQQRESARSRKDWATADAIRDQLNQSGLVIED--GPDG-- 456

Query: 453 RMTRWKQKP 461
              RW   P
Sbjct: 457 --PRWTLGP 463


>gi|254387148|ref|ZP_05002419.1| cysteinyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
 gi|194345964|gb|EDX26930.1| cysteinyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
          Length = 466

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 172/475 (36%), Positives = 261/475 (54%), Gaps = 58/475 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFTPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F    T L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIITKSAEQGRPWWSIG-------YENERAFNDGYTALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTRVPE 181
           RAT H+ +M+ +++ +I  GHAYEA+  + FD  S P Y + S +++D   Q  GT    
Sbjct: 114 RATGHVTEMVEMMRGLIERGHAYEADGNVYFDVRSFPGYLALSNQELDNLMQPSGT---G 170

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLI
Sbjct: 171 ETGKRDPRDFAMWKSAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDIHGGGLDLI 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       ++
Sbjct: 231 FPHHENEIAQAKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KA 281

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--GIIDPAV----- 351
           W   V+R  +   HYR  I+++ + L EAE   ++   + Q    K  G ++PA      
Sbjct: 282 WRPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFCQRVVEKAGGPVEPAAEVPLA 341

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL 401
               + +DL    A+  +H   R+                L    A   +LG++    H 
Sbjct: 342 FAEVMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAIARLSEVRAMLGVLGLDPLDPHW 401

Query: 402 ------NKNISIAIEKLVQERLILLK------MKKFSSADYIRKQLESKGFILED 444
                  +++  A++ LV  RL+L +       K +++AD IR QL+  G ++ED
Sbjct: 402 AGEADRGEDLHGAVDTLV--RLVLEQRESARGRKDWATADAIRDQLQQSGLVIED 454


>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 178/494 (36%), Positives = 252/494 (51%), Gaps = 70/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF  ++P  + +Y CG TVYD +H+G+ R +IVFDV  R L +  G K
Sbjct: 3   LKIYNTLSGKVEEFVPLNPPKVYIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEHL-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII RA++E      N     I ++    +  D   +       +PR
Sbjct: 62  -VKFVRNFTDVDDKIINRAKEE------NTDFMTIANRYIASYYIDMESIKVKPADVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+ ++I +I+ ++  G+AYE+  ++ F   + P YG  S+R  +E ++G RV     
Sbjct: 115 VTEHLQEIIDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPSEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   EP WESPWG GRPGWH EC AM   +LGK  DIHGGGLDL+FPH
Sbjct: 175 KRDPLDFALWKSAKAGEPAWESPWGLGRPGWHTECVAMVFKHLGKTIDIHGGGLDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HNG + + G+KMSKS GN++T+ E+        R +  
Sbjct: 235 HENEIAQAEALTG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVY-------RRYHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE---------------------ILLSKWPQTSTS 343
            V+RL +L THYR P+DF+ +++ EA+                     +  +K  Q    
Sbjct: 287 DVLRLLVLFTHYRSPLDFSWEKMEEAKRAYERIRHAIEDLDMLKNLQVVEENKISQLYEK 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDL----LPIFNA 387
               + A    L  D NT SA+  +  L  E  K              DL      + + 
Sbjct: 347 VKEAEEAFFEDLSEDFNTPSALSHIFALVGELGKVKSRAISERRISRQDLSAYEFAVSSI 406

Query: 388 SAHILGI--------------EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADY 430
             H+ GI              EV +  L     +    I+ LV  R      K F  ADY
Sbjct: 407 LRHMRGIFGLFEDIYPEKPVREVVRRELEAGQVLDERLIDILVDVRNQARAEKVFKIADY 466

Query: 431 IRKQLESKGFILED 444
           IR +L+  G +LED
Sbjct: 467 IRDRLKEVGIVLED 480


>gi|324989717|gb|EGC21660.1| cysteine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 447

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 176/468 (37%), Positives = 249/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R +  F  I    + MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLRNFVPITEKTVNMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEEGIT-PKE-----VADKYIAAFREDVTALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLVDLELGASGRTDDE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+PI+FT + + +A   L     T      G  D A L       
Sbjct: 288 --GQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+     +    +  A A +L   GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|311070741|ref|YP_003975664.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871258|gb|ADP34733.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 466

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 173/488 (35%), Positives = 265/488 (54%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   + 
Sbjct: 3   ITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +    +P       I+ +  + + +D   L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIRAADELGEDVPT------ISERFIKAYFEDVGALGCKKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  +Q +I  G+AYE++ ++ F T +   YG  S++ IDE + G R+     
Sbjct: 115 VTENMDAIIDFVQELIKKGYAYESDGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W++PWG+GRPGWHIECSAM   YLG+  DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKDGEISWDAPWGKGRPGWHIECSAMVKKYLGEQIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT A  W+HNG++N++  KMSKS GNF+ +++++       +   
Sbjct: 235 HENEIAQSEAL--TGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIID----- 348
             ++R  ML  HYR PI+++ +          RL  A   L     +ST+    D     
Sbjct: 286 PQLLRFFMLSVHYRHPINYSEELLENTKNAFNRLKTAYSNLLHRLNSSTNLTADDDEWLK 345

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLAR--------ESTKN---HDLLPIFNASAHI 391
                  A   A+ +D NT +AI  L +LA+        ++T +   +  + +F+  A +
Sbjct: 346 KIEEHRTAFEEAMDDDFNTANAISILFELAKHANYYLQEDNTADKVINAFIEMFDRIASV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ + ++ L   +   +E+L+++R    + + F+ +D IR QL+S   ILED       
Sbjct: 406 LGLTMGEQEL---LDQDVEELIEKRNEARRNRDFALSDQIRDQLKSMNIILED------T 456

Query: 452 QRMTRWKQ 459
            + TRWK+
Sbjct: 457 AQGTRWKR 464


>gi|312144267|ref|YP_003995713.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904918|gb|ADQ15359.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 484

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 186/498 (37%), Positives = 256/498 (51%), Gaps = 67/498 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  +F+ ++P  +RMYVCG TV +++HIG+ R  I +DV+ R L Y   E 
Sbjct: 2   LKVYNTLNNKKEKFETVEPGLVRMYVCGLTVQNYSHIGHIRSAINYDVIRRYLEYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TDI++KI++RA +E  +       + +  K    F++D       A     R
Sbjct: 61  -VEYISNFTDINEKIVKRAEEEGMTA------AELADKYANAFLEDIRSFNIKAADQYLR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + +I ++I ++  +I  G+AYE N ++ F   S  +YG  S R I++ + G R+     
Sbjct: 114 VSENIDEIIEMVSKLIEKGYAYEINGDVYFSVDSFEDYGKLSGRSIEDMQAGARIAVNED 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+    E GW+SPWG G PGWHIECSAMS   LG  FDIHGGG+DLIFPH
Sbjct: 174 KKNPLDFALWKKVEAGE-GWDSPWGEGWPGWHIECSAMSMKRLGATFDIHGGGVDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +K    W+HNG +NL G KMSKS GNF T  E+L       + + A
Sbjct: 233 HENEIAQSEAYSG-QKFVKYWLHNGTVNLSGEKMSKSQGNFFTSREVL-------KEFSA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDPAV 351
            VIR  +L  HYR PIDF+ ++L EA+  L +   T             S++   +D   
Sbjct: 285 QVIRYFLLTRHYRSPIDFSYEKLEEAQTSLQRLTNTRQELAKVLSGDIESSTGDRLDKDF 344

Query: 352 L-----------SALYNDLNTVSAIQALHKLARE------------STKNHDL----LPI 384
           L            AL +D NT  AI  LH    E            + KN  +      +
Sbjct: 345 LKKTKEIRAEFKKALDDDFNTAEAIGVLHDFVGEINSYINRSEFTLNEKNFSVLEESEEL 404

Query: 385 FNASAHILG----IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           F   A ILG    +E  K   +  +   IE L++ R        +  ADYIR QL+  G 
Sbjct: 405 FLELADILGLKFSVEKSKTKNDGFVEPLIELLLELRQKARDKNDWEEADYIRDQLKEIGI 464

Query: 441 ILEDYKNPDNGQRMTRWK 458
            + D       QR T W+
Sbjct: 465 EVID------TQRGTEWE 476


>gi|229074151|ref|ZP_04207197.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708921|gb|EEL61048.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 449

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 172/471 (36%), Positives = 250/471 (53%), Gaps = 57/471 (12%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   E  V YV N TD+DDK+I
Sbjct: 3   LEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLI 60

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           + A +    +P       I  +  + + +D T L C   T  PR T ++  +I  IQ ++
Sbjct: 61  KAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELV 114

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G+AYE+  ++ F T     YG  S + I + + G R+     K++P DF LWK +   
Sbjct: 115 NKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEG 174

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      + 
Sbjct: 175 EIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KT 233

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  W+HNG++N++  KMSKS GNFI +++++       + +   +IR  ML  HYR PI
Sbjct: 234 FARYWMHNGYINIDNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPI 286

Query: 321 DFTVQRLTEAEILLSKWP--------QTSTSKGIID-------------PAVLSALYNDL 359
           +F+ + L      L +          +  +S  + D              A   A+ +D 
Sbjct: 287 NFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKWLAEMEKFQAAFEEAMDDDF 346

Query: 360 NTVSAIQALHKLARESTK----NHDLLPIFNASA-------HILGIEVCKEHLNKNISIA 408
           NT +AI  L+ +A  + +     H    +  A          ILG+E+ KE L   +   
Sbjct: 347 NTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELAKEEL---LDEE 403

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IE L+Q+R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 404 IEALIQKRIEARKNRDFALSDQIRDDLKERNIILED------TAQGTRWKR 448


>gi|221632709|ref|YP_002521930.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155785|gb|ACM04912.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 465

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 180/468 (38%), Positives = 249/468 (53%), Gaps = 43/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL R+  +F+ ++P ++RMYVCGPTVY  AHIG+A   IVFD++ R L Y     
Sbjct: 3   LRVTNTLTREKEQFETLEPGHVRMYVCGPTVYSDAHIGHAMSAIVFDMIRRYLEY--SGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+  N TDIDDKII+RA      +P ++    +  +    ++ +T  L     T  PR
Sbjct: 61  RVTFAMNFTDIDDKIIQRAATL--GLPPHE----LAEQLIDAWLDETAALNIKPATIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP +I +++ +++ GHAY  + ++ F   S P YG  S R ++E   G RV     
Sbjct: 115 ATQEIPTIIEMVKGLLVKGHAYTIDGDVYFRVLSFPEYGKLSHRTLEEMLAGARVEIDPR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECSAM   +LG+  DIHGGG DLIFPH
Sbjct: 175 KEHPMDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGEQIDIHGGGADLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     W+HNG L L G KMSKS GN ITI ELL       R+   
Sbjct: 235 HENEIAQSEAFTGKKPFVRYWLHNGLLQLGGEKMSKSIGNLITIRELL------ARNGAG 288

Query: 305 PVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTSKGII 347
           P  RL +L +HYR P+ FT                 VQ +  AE+      + +T     
Sbjct: 289 P-FRLLVLSSHYRSPLTFTEEAFEAATRGFDRLRLAVQGVEPAELPNRPEHELATLADAT 347

Query: 348 DPAVLSALYNDLNTVSAIQALHKLA----RESTKNHDLLPIFNAS------AHILGIEVC 397
             A   A+ +D +T  A+  L +LA    R       L  I  A       A +LG    
Sbjct: 348 RLAFRQAMDDDFDTPVALARLFELARAINRARASGERLEAIRYAQFTLLELATVLGFRFD 407

Query: 398 KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ++   +  +   I+ L+  R  L   +++  ADYIR +L   G ++ED
Sbjct: 408 EQSTGRQSAEPFIDLLLDVRARLRAQRQWELADYIRGRLNELGVLVED 455


>gi|148381443|ref|YP_001255984.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933894|ref|YP_001385818.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153937063|ref|YP_001389225.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|187629799|sp|A7FZ91|SYC_CLOB1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629801|sp|A5I7M8|SYC_CLOBH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148290927|emb|CAL85063.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929938|gb|ABS35438.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932977|gb|ABS38476.1| cysteine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 465

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 179/488 (36%), Positives = 261/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISIIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLED--TPQG- 459

Query: 452 QRMTRWKQ 459
               RWKQ
Sbjct: 460 ---IRWKQ 464


>gi|323465875|gb|ADX69562.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 474

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 185/503 (36%), Positives = 266/503 (52%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y  G K
Sbjct: 1   MKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 113 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSK 344
             +     V+R  M    YR  I+++ + L +A  +L ++  T             S   
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 344

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+         A+ +D N  +A+ A+          +DLLPI NA+A+       
Sbjct: 345 DELAKAIAKTNEKFEVAMDDDFNVQNAVTAI----------YDLLPIVNANANAEKADKK 394

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + GI+   +C +    N    I++LV++R    K K ++++D IR 
Sbjct: 395 SLKLFKDKLSAWLLVFGIDTEKLCSQSAGSN-DDEIDQLVKKRDEARKKKDWATSDQIRD 453

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 454 QLKEMGITIQD--TP-QGTRWTR 473


>gi|158337192|ref|YP_001518367.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158307433|gb|ABW29050.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 504

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 185/513 (36%), Positives = 263/513 (51%), Gaps = 74/513 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F  ++   ++ Y CG TVYD+ H+G+AR  IV+D++ R L++   + 
Sbjct: 3   LQIYNTLSRTKEPFTTLEAGKVQFYCCGVTVYDYCHLGHARSYIVWDIVRRYLQWRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDIDDKI++RA +             +T    Q +  D  RL  LA    P+
Sbjct: 62  -VTYVQNYTDIDDKILKRAAE------TGQDWQAVTQTFIQAYEADMARLNILAADAYPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT  IP +I LI+++   G AY A  ++ F     P YG  S R +D+ + G   RV   
Sbjct: 115 ATESIPAIINLIRDLETRGVAYAAQGDVYFAVERFPGYGKLSGRLLDQMEAGASGRVEQL 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P +  K++P DF LWK + P EP W+SPWG GRPGWHIECSAM +  LG   DIH GG 
Sbjct: 175 EPAEQKKRHPLDFALWKATKPGEPSWDSPWGPGRPGWHIECSAMVNQCLGAEIDIHAGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK-- 296
           DL+FPHHENEIAQS  A    + A  W+HNGF+N+ G KMSKS GNF TI +LL+T    
Sbjct: 235 DLVFPHHENEIAQS-EAGLTPRLARYWMHNGFVNVGGEKMSKSLGNFTTIRQLLDTPLPI 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLS-------KWPQT 340
             G++     +RL +L   YR+PIDFT   +  A+         +L         +W   
Sbjct: 294 LAGKTLHPMALRLFVLQAQYRKPIDFTDDAIAAAQQSWQTLKEGLLFGYDYGAQLQWSDY 353

Query: 341 S-------TSKGIIDPAVLS-----ALYNDLNTVSAIQALHKLARESTKNHDLLP----- 383
           +        +  I DP V       A+ +D N+ S +  L +LA++  K  ++L      
Sbjct: 354 TDPDFGNPANMRIPDPNVAVQRFQLAMDDDFNSPSGLVVLFELAKDLRKAGNILSHQGET 413

Query: 384 ------------IFNASAHILGIEVCKEHLNKNISI-------AIEKLVQERLILLKMKK 424
                            A +LG+E   +    +          AIE L++ER    + K 
Sbjct: 414 STTSEQLREQWQTLVCLAQVLGLEAQPDSDAASTDSEDGLSEQAIEALIEERQAARQAKN 473

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           ++ +D IR QL+++G  L      D    +TRW
Sbjct: 474 YAESDRIRDQLKAEGITL-----IDQAGGVTRW 501


>gi|153813240|ref|ZP_01965908.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
 gi|149830653|gb|EDM85744.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
          Length = 469

 Score =  298 bits (763), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 179/479 (37%), Positives = 252/479 (52%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF  ++   +RMYVCGPTVY+  HIGNARPMI+FD + R L Y   + 
Sbjct: 1   MKLFNTMSRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGVSA------EEISQRYIAECKKDMAGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ +I   +AY  A+  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIDGMIDMIQTLIDKEYAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPFWKSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS C + +   A  W+HN FLN++ RKMSKS GNF T+ E+       G 
Sbjct: 233 VFPHHENEIAQSECCNGV-PFAKYWMHNAFLNIDNRKMSKSLGNFRTVREI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTST-------- 342
            +   V+R  ML  HYR P++F+          ++R+TEA   L      +T        
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMESSKNALERITEAAARLRDRQAAATVQEATEDE 344

Query: 343 SKGIIDPAVL-----SALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
            K + + A        ++ +D NT  A+ A+ +L + +  N             L +   
Sbjct: 345 KKLMQEEAAFVTKFEESMDDDFNTADALAAVFELVKFANTNVQEGSSKEFAGHTLEVMTK 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              +LG+ + K+   + +   IE L+ ER    K K F+ AD IR  L  KG  L+D +
Sbjct: 405 LCDVLGLTLEKKE--EILDEEIENLIAERQAARKAKDFARADEIRGLLLDKGIELKDTR 461


>gi|323359183|ref|YP_004225579.1| cysteinyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275554|dbj|BAJ75699.1| cysteinyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 464

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 172/470 (36%), Positives = 247/470 (52%), Gaps = 49/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  + + +F  +DPSN+ +YVCGPTV    HIG+ R  + FD+L R L + YG  
Sbjct: 3   VRLYDTRAQALRDFAPLDPSNVTVYVCGPTVQSGPHIGHVRAALAFDLLRRWLAHRYGR- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDK++  A    P          +  +   +F +    +  L PT++PR
Sbjct: 62  -VTFVRNVTDIDDKVLANATATEPWW-------ALAYRMELEFSRAYAAIGILPPTYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + QM  LI  +I  GHAY A  ++ FD  S P YG  +R+ +D  +       +  
Sbjct: 114 ATASVTQMQELIAELIERGHAYAAAGDVYFDVRSWPAYGELTRQSLDAMEPAADADPR-G 172

Query: 185 KKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           K++P DF LWK +   EP    W SPWG GRPGWHIECSAMS  YLG  FDIHGGGLDL 
Sbjct: 173 KRDPRDFALWKGAKDDEPASATWASPWGAGRPGWHIECSAMSRRYLGPEFDIHGGGLDLR 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   +  A  W+HNG + ++G+KMSKS GNF   +++L         
Sbjct: 233 FPHHENEIAQSTAAG--DAFARYWVHNGLVTVDGQKMSKSLGNFTLASDVLAEND----- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVL------ 352
               V+R A+   HYR  +D + +   EA   L +   + Q        DP V+      
Sbjct: 286 --PRVVRYALAAAHYRSNLDVSDRAFAEAASALGRIATFRQRVLRAAGADPTVILPGDVP 343

Query: 353 ----SALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAH--------ILGIEVCKE 399
               +A+ +DL+   A+  +H+  R      D   +    +AH        ILG++  + 
Sbjct: 344 ETFAAAMDDDLSVPQALAVVHETVRAGNVALDAGDLDAGVAAHRSVAAMLGILGLDADEP 403

Query: 400 HLNKNIS-IAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILED 444
            +    S  A++ LVQ    +R      K +++AD IR  + + G  LED
Sbjct: 404 AVATGSSETALDALVQTMITQRAQARADKDWAAADRIRDAIAAAGITLED 453


>gi|322807828|emb|CBZ05403.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 465

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 178/488 (36%), Positives = 262/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  ++LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTARQILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKEIVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 458 -QGVRWKQ 464


>gi|302559960|ref|ZP_07312302.1| cysteinyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302477578|gb|EFL40671.1| cysteinyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 466

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 171/488 (35%), Positives = 258/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y     
Sbjct: 3   IRLYDTSARQIRDFTPLQPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYR--GL 60

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 61  AVTFIRNVTDIDDKIIAKSAEQGRPWWSIG-------FENERAFTNGYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +M+ +++ +I  GHAYEA+  + F  +S P Y   S +++D     +   E  
Sbjct: 114 RATGHITEMVEMMRGLIERGHAYEADGNVYFAVASFPEYLELSNQELDNLLQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIFP
Sbjct: 173 GKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQAKAYG--DEFARYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--GIIDPAV------L 352
             V+R  +   HYR  I+++ + L EAE   ++   + Q    K  G+++PA        
Sbjct: 284 PVVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGVVEPAAEVPPAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL-- 401
            A+ +D+    A+  +H   R+                L    A   +LG++    H   
Sbjct: 344 EAMDDDMGVPQALAVVHTTVRQGNSALAADDKEEAVARLAEVRAMLGVLGLDPLDPHWAG 403

Query: 402 ----NKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                +++  A++ LV+    +R      K + +AD IR QL   G ++ED      G +
Sbjct: 404 ESDRGQDLHGAVDTLVRMVLDQREAARARKDWPTADAIRDQLNQSGLVIED------GPQ 457

Query: 454 MTRWKQKP 461
             RW   P
Sbjct: 458 GPRWSLGP 465


>gi|289770190|ref|ZP_06529568.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700389|gb|EFD67818.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 569

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 165/470 (35%), Positives = 250/470 (53%), Gaps = 48/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 106 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 164

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII +A ++      N     I  +N + F      L CL PT++PR
Sbjct: 165 -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 217

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S+P Y S S + +DE +  +   E   
Sbjct: 218 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQPSEDGET-G 276

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DLIFPH
Sbjct: 277 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 336

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + WP 
Sbjct: 337 HENEIAQAKGFG--DAFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 387

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTS--------KGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE    +   + Q  T            + PA   
Sbjct: 388 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 447

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-------------------DLLPIFNASAHILGI 394
           A+ +DL    A+  +H   R+                         +L +    A   G 
Sbjct: 448 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGE 507

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   E L   +   +  ++ +R      K +++AD IR +L   G ++ED
Sbjct: 508 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDRLGQSGLVIED 557


>gi|126658705|ref|ZP_01729850.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619967|gb|EAZ90691.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 482

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 264/491 (53%), Gaps = 68/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++  F  + P  + MY CG TVYD+ H+G+AR  I++D++ R L++   E 
Sbjct: 3   LKIYNTQTRRLEPFITLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLQWRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDIDDKI+ RA+QE  S+        I+ +  + +  D   L  +     PR
Sbjct: 62  -VTYVQNFTDIDDKILRRAQQEGVSM------VDISERFIEAYFTDIRPLNVMDADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
            T++I  +  LIQ ++   +AY  + ++ F   +   YG  S R     + G   RV   
Sbjct: 115 VTDNISGIQQLIQVLLEKNYAYAVDGDVYFHVEAFGEYGKLSGRSQSMMQAGASGRVAMS 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P   HKK+P+DF LWK + P EP W SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPANSHKKHPSDFALWKSAKPEEPAWNSPWGEGRPGWHIECSAMVRGLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+  +  A  W+HNG + + G KMSKS GNF TI ELL      
Sbjct: 235 DLVFPHHENEIAQSEAANG-KPLAKYWVHNGMVTVNGEKMSKSLGNFTTIRELLN----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
            R     VIRL +L  HYR+P+DFT + ++ A    + W   +  +G+            
Sbjct: 289 -RPLDPMVIRLFVLQAHYRKPLDFTEEAISSA---TNGW--QTLQQGLRFGEKYGNRLGW 342

Query: 347 -----IDPAVL----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--------- 388
                +D AV+    +A+ +D N+   +  L +LA+   +  +LL     +         
Sbjct: 343 QKNQELDSAVIEQFNAAMDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKTPTDSDNLQR 402

Query: 389 --------AHILGIEV-CKEHL--NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLE 436
                   A ILG+E   K +L   +N   A I +L+Q+R    K+K ++ +D IR+QL+
Sbjct: 403 QWQTLVHLAGILGLEAKPKANLEDTQNFDEAKITRLIQQRNAARKVKDYAQSDRIREQLQ 462

Query: 437 SKGFILEDYKN 447
            KG  L D+ N
Sbjct: 463 QKGITLIDHPN 473


>gi|146319578|ref|YP_001199290.1| cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321776|ref|YP_001201487.1| cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752580|ref|YP_003025721.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754406|ref|YP_003027547.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756340|ref|YP_003029480.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
 gi|145690384|gb|ABP90890.1| Cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692582|gb|ABP93087.1| Cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816869|emb|CAZ52516.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818804|emb|CAZ56644.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820652|emb|CAR47412.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292559192|gb|ADE32193.1| Cysteinyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 447

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 171/468 (36%), Positives = 256/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+ N TD+DDKII+ A +   +         ++ K    F +D T+L     T  PR
Sbjct: 61  -VTYISNFTDVDDKIIKAANEAGMTTKE------LSDKFIAAFKEDVTKLGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
             +++ ++I  +Q +I  G+AYEA  ++ F    + NY   + + + + ++G   RV  E
Sbjct: 114 VIDYMDEIIDFVQVLIDKGYAYEAAGDVYFRVEKVENYARLANKTLSDLEVGASGRVEGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GQLKEHPFDFALWKTAKSGEVSWGSPWGAGRPGWHIECSVMATEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS C    +  AN W+HN  LN+   KMSKS GNF+T +++LE        
Sbjct: 234 FPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE-------Q 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R  +   HYR P+++T + +++AEI L     T T   +  +D + L       
Sbjct: 286 IDGQVLRFFLATQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAAF 345

Query: 353 -SALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I A+   A+  ++ N+D  +   F     + GI   +E L+      
Sbjct: 346 EAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLAVFGIVFEEEVLDSE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ ER      + F++AD IR +L ++G  L D K   +G R TR
Sbjct: 402 IEALIAERQAARANRDFATADRIRDELAAQGIKLLDTK---DGVRWTR 446


>gi|300214882|gb|ADJ79298.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 470

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 182/491 (37%), Positives = 264/491 (53%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +   F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKERFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A QE     +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKII-KASQE-----MNLSVKEITEKFINAFYEDTSVLNIKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEK 182
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID  EQ   +RV + 
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 183 YHKKN--PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              K   P DF LWK++   E  W+SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQS-EAKTGKKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE----STKN-------HDLLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++    S K        ++L+  +   
Sbjct: 346 VEANFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IEKL+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFNEEK--ELLDDTIEKLIQERNEARKNKNFKRSDEIRDLLKEQGIILED---- 459

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 460 --TAQGTRWKR 468


>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 466

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 169/488 (34%), Positives = 257/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R+  EF  I P  ++MYVCGPTVY++ HIGN R  I+FD + R L Y  G K
Sbjct: 1   MRLYNSLTRQKEEFVPIVPGEVKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+++N TDIDDK+I +A  E  ++        +  K   ++ +D   L     T  PR
Sbjct: 60  -VTFIQNFTDIDDKMINKANAEGITV------KELGDKFIDEYYQDADGLQVKRATINPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I +++  ++++I  G AYE + ++ F T     YG    + +++ + G R+     
Sbjct: 113 ATEYIDEVVEFVKDLIDRGFAYEIDGDVYFSTKKFEEYGKLCGQNLEDLQSGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+   LG   DIHGGG+DL FPH
Sbjct: 173 KKDPMDFAVWKSQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHGGGMDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +K AN W+H  F+N++ +KMSKS  NF+T  E L       + + +
Sbjct: 233 HENEIAQSEAVTG-QKFANYWMHAAFVNVDNKKMSKSENNFVTAREAL-------KKYNS 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            VIR  ML  HYR  I+F+ + L  A+  + + +   +  + +I+               
Sbjct: 285 DVIRFLMLSGHYRTQINFSAELLDSAKSSVERLYNCVNNLENLINEVNRKEANDSEKAYL 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT   I  +  L ++   N  +          L +       
Sbjct: 345 KSLDKHREKFIEKMDDDFNTADGISVIFDLIKDINNNVSIDSSSELCEGTLNLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++   K++ + I++L+ +R    K + F+ AD IR  L+++  ILED   P   
Sbjct: 405 LGI--LQKTEEKSLEVEIQELIDKRQEARKNRDFALADKIRDDLKARNIILED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 458 -QGVRWKK 464


>gi|299067219|emb|CBJ38416.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
           solanacearum CMR15]
          Length = 465

 Score =  298 bits (762), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 177/469 (37%), Positives = 258/469 (55%), Gaps = 43/469 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T++      +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGTLTNRFIAAMHEDADALGVQRPDRE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGKLQHNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGAHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A+      N W+HNGF+ +   KMSKS GNF TI ++L+     
Sbjct: 234 DLQFPHHENEIAQSEGANG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKV---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA- 350
              +   V+R  +L +HYR  ++++   L +A   L++        P  + ++   +   
Sbjct: 289 ---YDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEAQARPDWNEPH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH--LNK 403
                 A+++D NT  A+  L +LA E   T++  L     A   ++G+ V   H  L  
Sbjct: 346 GKRFREAMHDDFNTPVAMAVLFELATEINKTRSPALASQLAALGGVMGLLVRDPHAFLQG 405

Query: 404 NISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  A        +E  ++ R      + F+ AD IR  L + G +LED
Sbjct: 406 GVGAAADGLDTAEVETRIEARRAAKAARDFARADGIRADLLAAGIVLED 454


>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 497

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 152/329 (46%), Positives = 198/329 (60%), Gaps = 25/329 (7%)

Query: 11  LERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGEKCVT 67
           + RK   F   DP+   ++MYVCG TVYD++HIG+AR  + FDVLYR L+R  Y    VT
Sbjct: 1   MTRKKEIFTPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRQLMRLGYD---VT 57

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           Y RN TDIDDKII+R+ +        +    +T K  + F +D   L CL PT +PRAT 
Sbjct: 58  YCRNFTDIDDKIIKRSNES------GETCEALTDKFIEAFHEDMAALGCLRPTLEPRATE 111

Query: 128 HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
            +  +I  I+ +I  G+AYE   ++ F   ++P YG+ S R  ++ + G RV     KKN
Sbjct: 112 CVDDIIAFIERLIAKGNAYETEGDVYFSVDTLPAYGALSGRNQEDNRAGERVAVDGRKKN 171

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
           PADF LWK + P EP W SPWG GRPGWHIECSAM    LG   DIHGGG DL+FPHHEN
Sbjct: 172 PADFALWKTAKPGEPTWTSPWGEGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHEN 231

Query: 248 EIAQSCCADRIEKTAN------IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           E+AQS  A      A+       W+HNGF+ ++  KMSKS GNF TI E+L+        
Sbjct: 232 ELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLD-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +   V+R  +L  HYR PI++T + L EA
Sbjct: 285 YHPFVLRFMLLGAHYRAPINYTQRALEEA 313


>gi|206972194|ref|ZP_03233141.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206732768|gb|EDZ49943.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 465

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 262/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVLS- 353
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST     +   LS 
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLSE 346

Query: 354 ----------ALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                     A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 IEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ K    + +   IE+L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELSK---EELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|30018360|ref|NP_829991.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218235383|ref|YP_002364939.1| cysteinyl-tRNA synthetase [Bacillus cereus B4264]
 gi|33301673|sp|Q81J59|SYC_BACCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735047|sp|B7HJ28|SYC_BACC4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29893900|gb|AAP07192.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218163340|gb|ACK63332.1| cysteine--tRNA ligase [Bacillus cereus B4264]
          Length = 465

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 178/487 (36%), Positives = 259/487 (53%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIID-------- 348
            +IR  ML  HYR PI+F+ + L      L +          +  +S  + D        
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAE 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 IEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ K    + +   IE+L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELSK---EELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKERNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 465

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 180/482 (37%), Positives = 255/482 (52%), Gaps = 69/482 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRRSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEQLESNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWSE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHD-----------------------LL 382
                  +A+ +D NT  AI  L +LA E  +  D                        L
Sbjct: 343 PHAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
              + +A   G+   +          IE  +  R+   + K ++ AD IR +L   G  L
Sbjct: 403 QQASGAARDGGLAADE----------IEAKIAARVAAKQAKDYAEADRIRAELLDAGIAL 452

Query: 443 ED 444
           ED
Sbjct: 453 ED 454


>gi|187776555|ref|ZP_02993028.1| hypothetical protein CLOSPO_00067 [Clostridium sporogenes ATCC
           15579]
 gi|187775214|gb|EDU39016.1| hypothetical protein CLOSPO_00067 [Clostridium sporogenes ATCC
           15579]
          Length = 465

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 178/488 (36%), Positives = 264/488 (54%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y  G K
Sbjct: 1   MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDSIRRYLEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E  ++        +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKKANEEGITV------KELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G+R+     
Sbjct: 113 ATEFMDEIIRFVSDLIEKGYAYEIDGDVYFSTKRFGDYGKLSGQNLEELQLGSRINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQS-EARTGKQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R+ ML  HYR  I+F+++ L   +  L + +   +  + ++D               
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED   P   
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 458 -QGVRWKQ 464


>gi|157363627|ref|YP_001470394.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|229558795|sp|A8F596|SYC_THELT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157314231|gb|ABV33330.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 463

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 176/470 (37%), Positives = 243/470 (51%), Gaps = 50/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL + I EF+  +P  +RMYVCGPTVY   HIGNARPM+VFD L R L Y  G +
Sbjct: 1   MRFYNTLSKHIEEFKENEPGIVRMYVCGPTVYGLIHIGNARPMVVFDALRRYLEYR-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +  V+N TDIDDKII +      SI  +     I+     ++ +D+  L   AP   P+
Sbjct: 60  VIM-VQNFTDIDDKIINK------SIEFSVDFKDISETFIAEYWRDSMALGVRAPNFSPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++ +P++I  IQN+I   HAY  + ++ F   S P YG  S R IDE K G R+     
Sbjct: 113 TSDFVPEIINAIQNLIAKNHAYVVDGDVYFSVRSFPRYGELSHRSIDELKAGARIDLNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECS MS+  LG   DIH GG DLIFPH
Sbjct: 173 KRDPLDFALWKSAKPGEPYWKSPWGNGRPGWHIECSVMSTKLLGTTLDIHAGGEDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS      +     W+HNG +   G KMSKS GN   + E L  KK+G     A
Sbjct: 233 HENEKAQSEALTG-KTFVKYWLHNGMIKYTGDKMSKSTGNIFLLREAL--KKYG-----A 284

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK-----WPQTSTSKGIIDP 349
             +++  L  HYR PI+F+            R+ E  +          P+  +       
Sbjct: 285 DALKIFFLSKHYRSPIEFSEKALSSAAKAATRINETFLRFESEFSFAIPKQDSWINEKRS 344

Query: 350 AVLSALYNDLNTVSAIQALHKL------ARESTKNHDLLPIFNASAHILGIEVC------ 397
             + +L +D NT  A+  + +L      A +     D L I+    H+L  E C      
Sbjct: 345 IFIDSLDDDFNTPRALALIFELVNSLNRAMDDGNERDALKIY----HLLRREFCPVLGLF 400

Query: 398 ---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +   N++I   ++ L+  R  L   K++  +D IR +L   G  L+D
Sbjct: 401 DLPERADNRSIEELVKILIDVRAELRAKKQYELSDMIRSKLRKVGIELKD 450


>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|109894898|sp|Q30ZH8|SYC_DESDG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 485

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 183/491 (37%), Positives = 257/491 (52%), Gaps = 67/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  +F         +YVCG T YD  H+G+AR  + FDVL R LR+   + 
Sbjct: 1   MQLYNTLTRKKEKFIPQREGKASVYVCGITAYDLCHLGHARSSVAFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII+RA +   +       + +  K    F +D  RL CL    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKRAGETGLTS------TEVAEKYMAAFHEDMDRLGCLRADIEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI +MI L +++I  G AY  A+ ++ F   S  +YG  S R +D+ + G RV    
Sbjct: 113 CTQHIGEMIALCEDLISKGKAYSTASGDVYFRVRSFASYGKLSGRDVDDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  +L    DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKSAKPGEPYWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   E  A  W+HNGF+ +   KMSKS GNF TI ++L+        + 
Sbjct: 233 HHENEIAQTEAATGKE-FARYWVHNGFVQVNAEKMSKSLGNFSTIRDILQ-------GYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-----------ILLSKWPQTSTSKGIIDPAVL 352
              +R  +L  HYR PIDFT   + EAE           ++ ++  +T  S   +   VL
Sbjct: 285 PETLRYFLLTKHYRSPIDFTFDGMDEAEKNLRRIYQTLNLVENELQKTKWSAAPLPEEVL 344

Query: 353 S-----------ALYNDLNTVSAIQALHKLA------------RESTKNHDLL----PIF 385
           S           A+ +DLNT +A+  +  L             R+S +  D L     + 
Sbjct: 345 SEMDETERAWNEAMEDDLNTAAALGHIFGLVRLVNRIIEDKTMRKSAQARDALLRMQSMM 404

Query: 386 NASAHILGI------EVCKEHLN-----KNISIA-IEKLVQERLILLKMKKFSSADYIRK 433
                +LG+      E  +E  +     +++  A +E L+ ER    K K F  +D IR+
Sbjct: 405 ARWGAVLGLFTRQPAEFLREMRDCRAARRDVDTARVETLLLERQEARKAKDFERSDAIRE 464

Query: 434 QLESKGFILED 444
           +L   G  ++D
Sbjct: 465 ELARMGVEVQD 475


>gi|15241557|ref|NP_198699.1| tRNA synthetase class I (C) family protein [Arabidopsis thaliana]
 gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
 gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 511

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 185/504 (36%), Positives = 258/504 (51%), Gaps = 77/504 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++K+YNT+ ++      I P  I +YVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 5   KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHL- 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  VT+VRN TD+DDKII+RA +     P++     ++++   +++ D   L CL PTH
Sbjct: 64  -DYDVTFVRNFTDVDDKIIDRANKNGED-PLD-----LSNRFCDEYLVDMGALQCLPPTH 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR + H+  +I +I+ II     Y    ++ F     PNYG  S + ++  + G RV  
Sbjct: 117 QPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS HYL   FDIHGGG DL 
Sbjct: 177 DSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLK 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG + +   KM+KS  NF TI E+         S
Sbjct: 237 FPHHENEIAQTCAACE-DSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITA-------S 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------------------------SK 336
           +    +R  ++   YR P+ FT  +L  +   L                          K
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGK 348

Query: 337 WPQTSTSKGII---DPAVLSALYNDLNTVSAI------------QALHKLARESTKNH-- 379
             QT+  K II        S + +DLNT   +             +L KL +   K    
Sbjct: 349 SEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMS 408

Query: 380 ---DLLPIFNASAHILGI----------EVCKEHLNKNISIA------IEKLVQERLILL 420
               L+ I  A+  +L +          E+ KE   K +  A      I +L++ER+   
Sbjct: 409 MLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITAR 468

Query: 421 KMKKFSSADYIRKQLESKGFILED 444
           K K F+ +D IR++L  KG  L D
Sbjct: 469 KNKDFAKSDEIREKLTRKGIALMD 492


>gi|313625379|gb|EFR95169.1| cysteinyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 471

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 173/476 (36%), Positives = 253/476 (53%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKATVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT A  W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI------- 346
             VIR  ML  HYR+PI      L +A+  L +            QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHEDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARES----TKN-------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +    +K         + L +    
Sbjct: 346 WLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+++     +      +E L++ RL     + F+ AD IR  L+ K  ILED
Sbjct: 406 AEVLGLKLENTQTDSLDDSEVEALIEARLQARNERNFARADEIRDILKEKDIILED 461


>gi|321313765|ref|YP_004206052.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320020039|gb|ADV95025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 466

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 172/488 (35%), Positives = 258/488 (52%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   + 
Sbjct: 3   ITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I+ +  + + +D + L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------ISERFIKAYFEDVSALGCRKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
              ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+     
Sbjct: 115 VMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT A  W+HNG++N++  KMSKS GNF+ +++++       +   
Sbjct: 235 HENEIAQSEAL--TGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIIDP---- 349
             ++R  ML  HYR PI+++ +          RL  A   L     +ST+    D     
Sbjct: 286 PQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWLE 345

Query: 350 -------AVLSALYNDLNTVSAIQALHKLAREST----KNHD-------LLPIFNASAHI 391
                  A   A+ +D NT +AI  L  LA+ +     K+H         + +F+    +
Sbjct: 346 KVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVSV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED       
Sbjct: 406 LGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILED------T 456

Query: 452 QRMTRWKQ 459
            + TRWK+
Sbjct: 457 AQGTRWKR 464


>gi|227529487|ref|ZP_03959536.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350572|gb|EEJ40863.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 472

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 187/499 (37%), Positives = 262/499 (52%), Gaps = 72/499 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+   P  + MYVCGPTVY++ HIGNAR  I FD + R L +  G K
Sbjct: 2   LTIYNTLTRKQEEFKPQTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFK-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K  Q F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAHEQGITVPQ------LADKYIQAFMEDTKAINIEPATMHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +IP++I  IQ +I  G+AYE + ++ +      +YG  S + ID+ ++G        
Sbjct: 114 ATENIPEIIKFIQGLIDKGYAYEKDGDVYYRARKFKDYGQLSGQSIDDLEVGASEHVSDD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIHGGG DL
Sbjct: 174 EINKKEDPMDFALWKAAKPGEINWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +K    W+HNGF+ +  +  KMSKS  NFIT+++++      
Sbjct: 234 EFPHHENEIAQS-EAKTGQKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   L +A+  L           + Q     G  DP
Sbjct: 287 -KQVDPQVLRFFMATTQYRRPIQYSEDNLIDAKNNLEHIQTAFDNLTYRQKDAQDG-ADP 344

Query: 350 AV-----------LSALYNDLNTVSAIQALHKLARES--------------TKNHDLL-- 382
            V             A+ ND+N  + I  +++L + +              T+  DL+  
Sbjct: 345 VVTQKLADFKQSFTEAMDNDINVQNGITVVYELVKFANVYAQQKAVKAAALTEMKDLISE 404

Query: 383 --PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
              IF         E+  EH        I+ L+ ER    K K F+ +D IR +L+++G 
Sbjct: 405 LVSIFGVKLASSDNELNDEH--------IQALIDERNEARKNKDFARSDQIRDELKAQGI 456

Query: 441 ILEDYKNPDNGQRMTRWKQ 459
           ILED   P  G R  R K+
Sbjct: 457 ILED--TP-QGTRFKRVKK 472


>gi|332703611|ref|ZP_08423699.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553760|gb|EGJ50804.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 485

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 177/491 (36%), Positives = 249/491 (50%), Gaps = 67/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+   P  + MYVCG T YD  HIG+AR  +VFD+L R LR    E 
Sbjct: 1   MQLYNTLRRKKESFEPRVPGKVSMYVCGITAYDLCHIGHARSAVVFDILVRYLRSTGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN TD+DDKII RA +   S         I  K  + F +D  +L  L    +P+
Sbjct: 60  -VTFIRNFTDVDDKIINRANERGVSS------QEIAEKYIKTFHEDMDKLNVLRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+M+ L   +I    AY+  + ++ F   +   YG  S R ID+ + G R+    
Sbjct: 113 CTEHIPEMLTLTGELIAKDRAYKTLSGDVYFRVRAFEPYGKLSGRDIDDLRAGARITPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWH+ECSAM++ Y+    DIHGGG DLIFP
Sbjct: 173 AKEDPLDFALWKSAKPNEPFWESPWGKGRPGWHLECSAMAAKYVDLPLDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   E  A  W+HNGF+ +   KMSKS GNF TI ++L+        + 
Sbjct: 233 HHENEIAQTEAATDGE-LARFWVHNGFVQINQEKMSKSLGNFFTIRDILD-------KFM 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGII 347
             V+R  +L  HYR P+DF+ + L EAE  L                 KW + +    I 
Sbjct: 285 PEVLRFFLLGQHYRSPLDFSFESLEEAEKGLRRIYAAMGQMREALQKDKWGKAALPTEIT 344

Query: 348 DP------AVLSALYNDLNTVSAIQALHKLAR--------------ESTKN--HDLLPIF 385
           D       A   A+ +DLNT +A+  +    R              E  +N    +L   
Sbjct: 345 DELSTAEKAWDEAMTDDLNTAAALGHVFTAVRLAGRVMDDKAMRKSEGARNFWQRVLDNL 404

Query: 386 NASAHILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
              + + G+              C+       +  +E L+ +R      K F+S+D IR 
Sbjct: 405 ARWSQVFGVFYSQPQEFLDELRACRARRKGIDTAKVEALLTQRQEARAGKDFASSDAIRD 464

Query: 434 QLESKGFILED 444
           +L + G  ++D
Sbjct: 465 ELAAMGAEVKD 475


>gi|24378673|ref|NP_720628.1| cysteinyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|30316156|sp|Q8DWA9|SYC_STRMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24376535|gb|AAN57934.1|AE014867_6 putative cysteinyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 447

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 173/458 (37%), Positives = 246/458 (53%), Gaps = 34/458 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+TL R + EF  I  + + MYVCGPTVY++ H+GN R  I FD + R   Y     
Sbjct: 2   IKIYDTLTRSLREFVPIHENTVNMYVCGPTVYNYIHVGNGRSAIAFDTIRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +   +         ++ K    F +D   L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAAKAGMTT------KALSDKFIAAFKEDVAALGVKPATENPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV-PE 181
             +++  +I  +Q ++  G AYE++ ++ F      NY + + + ++E ++G   RV  E
Sbjct: 114 VIDYMQDIIDFVQILVDKGFAYESSGDVYFRVRKSDNYAALANKTLEELEIGASGRVDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 SDCKEDPLDFALWKAAKEGEIAWDSPWGAGRPGWHIECSVMATTILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +K AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKKFANYWMHNGFVNIDNEKMSKSLGNFITVHDALKTM------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+P +FT + + +AEI L     T        +D AV        
Sbjct: 287 -DGQVLRFFFATQHYRKPFNFTEKAIRDAEINLKYLKNTYEQPFTATVDEAVFARFLEKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--EVCKEHLNKNISIAI 409
            +A+  D NT + I  + +LA+     H    + +  A IL I   V KE +   +   I
Sbjct: 346 QAAMDEDFNTANGITVVFELAKWINSGHYDQTVKDKFAEILQIFGVVFKEEV---LDAEI 402

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           EKL++ER      + F+ AD IR  L ++G  L D K+
Sbjct: 403 EKLIEERQKARAARDFTKADAIRDDLAAQGIKLLDTKD 440


>gi|221068474|ref|ZP_03544579.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713497|gb|EED68865.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 461

 Score =  297 bits (760), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 182/465 (39%), Positives = 254/465 (54%), Gaps = 44/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R +  F  ++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR   G K
Sbjct: 3   LRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRAS-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    PT +PR
Sbjct: 62  -VTYVRNITDIDDKIIRRA------VENGETIRSLTDRMIDALHQDADALGIERPTLEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+A N ++ +       YG  S + +DE   G RV    
Sbjct: 115 ATEYVPQMLGMIAKLQDKGLAYQAGNGDVNYAVRKFAGYGKLSGKSLDELNAGERVAVAD 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   EP    W+SP+G GRPGWHIECSAM    LG+ FDIHGGG DL
Sbjct: 175 GKLDPLDFVLWKSAKADEPADVKWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A  W+HNGF+N++  KMSKS GNF TI ++L       +
Sbjct: 235 QFPHHENEIAQSEGATG-KPFAQTWMHNGFINVDNEKMSKSLGNFFTIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  IR  ++ +HYR P++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 EYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKR---LYTALDLVAPAEVQVDWSNPY 343

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHLN 402
                +A+  D  T  A+  L +LA E  ++       LL    A   +L  E  K    
Sbjct: 344 AARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKTLGACLGLLQAEPQKFLQA 403

Query: 403 KNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  +   AIE  +  R      K ++ AD IRK+L  +G +L+D
Sbjct: 404 GSEGVDAAAIEAQIAARAQAKAAKNWAEADRIRKELLEQGIVLKD 448


>gi|306832715|ref|ZP_07465852.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425171|gb|EFM28300.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 448

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 173/469 (36%), Positives = 257/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y  G K
Sbjct: 3   IKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +      +       + K    F++D  +L     T  PR
Sbjct: 62  -VNYISNFTDVDDKIIKGAAE------VGMDTKAFSDKFIAAFMEDVKQLGVKPATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
             +++ ++I  ++ ++  G AYEAN ++ F  +   NY   + + + + ++G   RV  E
Sbjct: 115 VIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVDGE 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 175 GEIKENPLDFALWKSAKPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGADLE 234

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L       +
Sbjct: 235 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVL------ 352
           +    V+R  +    YR+P++FT + + +A + L     T T       D A L      
Sbjct: 286 NVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKAD 345

Query: 353 --SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + I  +  +A+       N  +   F     + GI   +E L+ +   
Sbjct: 346 FEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEEVLDAD--- 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+++R      K F++AD IR QL ++G  L D K   +G R TR
Sbjct: 403 -IEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTK---DGVRWTR 447


>gi|306830478|ref|ZP_07463648.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427503|gb|EFM30605.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 448

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 173/469 (36%), Positives = 256/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y  G K
Sbjct: 3   IKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D  +L     T  PR
Sbjct: 62  -VNYISNFTDVDDKIIKGAAEAGMDT------KAFSDKFIAAFMEDVKQLGVKPATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
             +++ ++I  ++ ++  G AYEAN ++ F  +   NY   + + + + ++G   RV  E
Sbjct: 115 VIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVDGE 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 175 GEIKENPLDFALWKSAKPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGADLE 234

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L       +
Sbjct: 235 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVL------ 352
           +    V+R  +    YR+P++FT + + +A + L     T T       D A L      
Sbjct: 286 NVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKAD 345

Query: 353 --SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + I  +  +A+       N  +   F     + GI   +E L+ +   
Sbjct: 346 FEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEEVLDAD--- 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+++R      K F++AD IR QL ++G  L D K   +G R TR
Sbjct: 403 -IEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTK---DGVRWTR 447


>gi|57233567|ref|YP_180814.1| cysteinyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|109894896|sp|Q3ZAD5|SYC_DEHE1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57224015|gb|AAW39072.1| cysteinyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 458

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 174/466 (37%), Positives = 244/466 (52%), Gaps = 46/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF  ++   ++MYVCG T     HIG+A   I FDV+ R L Y  G +
Sbjct: 1   MKIYNTLSGKLEEFVPLEDGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLSYK-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQE--HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V Y++N TDIDDKII +A  +   PS         +  +N   F+     L      + 
Sbjct: 60  -VKYIQNFTDIDDKIIAKANAQGIEPST--------LAERNIGVFLDAMAALNITPADYY 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  +P++I ++  +I  G+AYEA   +      +  YG  S R +++   G R+   
Sbjct: 111 PRATQEVPKIIEMVSGLIEKGYAYEAGGSVYLRVQKVEGYGKLSHRTLEQMMAGARIEPG 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIF
Sbjct: 171 EEKEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         +
Sbjct: 231 PHHENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALS-------RY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPAVLSAL 355
            A  +R+ +L + YR P+ ++ + L  AE    +  QT+  +         +D       
Sbjct: 284 SADALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARQDNPRLQEINVDVKTYRER 343

Query: 356 Y-----NDLNTVSAIQALHKLARE----------STKNHDLLPIFNASAHILGIE--VCK 398
           +     ND NT +A+  +  L RE          ST+  +L   F   A ILG+   + +
Sbjct: 344 FTQYMDNDFNTSAALATIFDLGRELNRIEAEGGKSTQGQEL---FKELAGILGLSLIIAE 400

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + + +  I+ L++ R  L   K++  AD IR  L++ G +LED
Sbjct: 401 PTTSADAAPFIDMLIELRKDLRLAKQYQLADKIRTSLDAAGILLED 446


>gi|291616610|ref|YP_003519352.1| CysS [Pantoea ananatis LMG 20103]
 gi|291151640|gb|ADD76224.1| CysS [Pantoea ananatis LMG 20103]
          Length = 437

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 176/459 (38%), Positives = 248/459 (54%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LRY   +  V YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFD--VNYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++I  +T++   +   D   L  L P  +PRAT HIP+++ L++ +I  GHAY 
Sbjct: 58  -----GESIETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEIVELVEKLIARGHAYV 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A N +++FD  S  +YG+ SR+ +D+ + G RV     K+NP DF+LWK S   EP W S
Sbjct: 113 AENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKADEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA       N W+
Sbjct: 173 PWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSTCA-HDGPYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS  NF T+ ++L+        + A  +R  ++  HYR  +++    
Sbjct: 232 HSGMVMIDREKMSKSLNNFFTVRDVLQ-------HYDAETVRYFLMSGHYRSQLNYGEDN 284

Query: 327 LTEAEILLSKW-------PQTSTSKG--IIDPAVLSALYNDLNTVSAIQALHKLARE--- 374
           L +A   L +         + + + G    +     A+ +D NT  A   L  +ARE   
Sbjct: 285 LNQARAALERLYTALRHTDRNAVADGGEAFEARFREAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 375 -----STKNHDLLPIFNASAHILGI-----EV---CKEHLNKNISIAIEKLVQERLILLK 421
                 T  + L       A++LGI     EV        N      IE+ V+ R     
Sbjct: 345 LKGEDMTAANALAAKLREIANVLGILQQEPEVFLQSSAQGNDEEVAEIERWVKARADARA 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K ++ AD  R +L + G I+ED      G + + W++K
Sbjct: 405 AKDWAQADVARDKLNALGVIVED------GPQGSSWRRK 437


>gi|256786300|ref|ZP_05524731.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 479

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 165/470 (35%), Positives = 250/470 (53%), Gaps = 48/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 16  IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII +A ++      N     I  +N + F      L CL PT++PR
Sbjct: 75  -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S+P Y S S + +DE +  +   E   
Sbjct: 128 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQPSEDGET-G 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DLIFPH
Sbjct: 187 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + WP 
Sbjct: 247 HENEIAQAKGFG--DAFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 297

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTS--------KGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE    +   + Q  T            + PA   
Sbjct: 298 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 357

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-------------------DLLPIFNASAHILGI 394
           A+ +DL    A+  +H   R+                         +L +    A   G 
Sbjct: 358 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGE 417

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   E L   +   +  ++ +R      K +++AD IR +L   G ++ED
Sbjct: 418 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDRLGQSGLVIED 467


>gi|259502662|ref|ZP_05745564.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169307|gb|EEW53802.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 471

 Score =  296 bits (759), Expect = 3e-78,   Method: Compositional matrix adjust.
 Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 63/481 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LTIYNTLTRRKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K  + F++DTT +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAHEQGITVPQ------LADKFIRAFMEDTTAVNIEPATKHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +IP++I  +Q +I +G+AYE++ ++ +      NYG  S + ID+ ++G        
Sbjct: 114 ATENIPEIIAFVQRLIKNGYAYESDGDVYYRARKFANYGQLSGQSIDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLG+  DIH GG DL
Sbjct: 174 EIGKKEDPMDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGQTLDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +     W+HNGF+ +  +  KMSKS  NFIT++++++T    
Sbjct: 234 EFPHHENEIAQSEAATG-QPFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDIIKTVD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP 349
                  V+R  M  T YR PI ++   LT+A+  L           + +     G +D 
Sbjct: 291 -----PQVLRFFMATTQYRRPIQYSEDNLTDAQNNLEHIRTAYDNLTYREQDAEVG-VDE 344

Query: 350 AV-----------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
            V            + + +D+N  + I  +++L + +   +   P+    A    ++  K
Sbjct: 345 VVSQQLADFTARFTAVMDDDINVQNGIAVVYELVK-AANTYAQQPVVKQGA----LQAYK 399

Query: 399 EHLNKNISI---------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           + L + +SI                I+ L++ER    K K F+ +D IR +L+ +G ILE
Sbjct: 400 DKLAQLVSIFGIKLVARDNQIDDEQIKALIEERNQARKNKDFARSDQIRDELKQRGIILE 459

Query: 444 D 444
           D
Sbjct: 460 D 460


>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|229558630|sp|B1I0T1|SYC_DESAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 478

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 190/501 (37%), Positives = 254/501 (50%), Gaps = 70/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL  +   F   DP  + +YVCGPT Y+F H+GNAR ++VFD + R   + Y   
Sbjct: 1   MQIFNTLTGRKETFCPRDPGRVSIYVCGPTTYNFIHLGNARALVVFDTIRRY--FLYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII R+R+E            + +K   ++  D   L        P+
Sbjct: 59  RVLYIQNFTDVDDKIINRSREEGIDP------QTLAAKYVDEYFVDADALNVRRADVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HIP++I LI  II  G AY A  ++ F       YG  S+R +D+   G RV     
Sbjct: 113 VSDHIPEIIALITMIIDRGLAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEVGEQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWGRGRPGWHIECSAM+  YLG  FDIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKAAKPGEPWWESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   E  A  WIHNGF+ +   KMSKS GN   + EL        R +P 
Sbjct: 233 HENEIAQSEGATG-EPFARYWIHNGFITIREEKMSKSLGNVFLVRELT-------RLYPP 284

Query: 305 PVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSK-----WPQTSTSKGIIDP 349
             +RL +L  HYR P+D+           V RL     LL +      P      G    
Sbjct: 285 EALRLFLLSNHYRNPLDYDPEAMEASVRAVNRLKTCLGLLRESLDRPAPDGDGGGGNRLE 344

Query: 350 AVL--------SALYNDLNTVSAIQALHKLARE-STKNHD-----------LLPIFNASA 389
           AVL        +A+ +D NT  A   +  L  E +T  H             L +F+A  
Sbjct: 345 AVLEVLQGRFEAAMDDDFNTALAQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFN 404

Query: 390 HILGIEVCKEHLNK------NISIAIEKLVQERLILLKM-----KKFSSADYIRKQLESK 438
            +LGI    EH  +       +S  + + + + LI L+      K F++AD IR  L + 
Sbjct: 405 RVLGI--FPEHKGRIVLEAGAVSGDLSQGLLDLLIALRQDARRNKDFATADRIRDGLRAL 462

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G +LED   P       RWK+
Sbjct: 463 GILLED--TPQG----VRWKK 477


>gi|90962221|ref|YP_536137.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123269889|sp|Q1WSS5|SYC_LACS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|90821415|gb|ABE00054.1| Cysteinyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 470

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 263/491 (53%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +  +F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A QE     +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKII-KASQE-----MNLSVKEITEKFINAFYEDTSALNVKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEK 182
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID  EQ   +RV + 
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 183 YHKKN--PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              K   P DF LWK+    E  W SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKVKQGEISWNSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQS-EAKTGKKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KKVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE----STKN-------HDLLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++    S K        ++L+  +   
Sbjct: 346 VEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IE+L+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFSEEK--ELLDDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILED---- 459

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 460 --TAQGTRWKR 468


>gi|55820186|ref|YP_138628.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822074|ref|YP_140515.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|61216120|sp|Q5M1W6|SYC_STRT1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216121|sp|Q5M6F6|SYC_STRT2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55736171|gb|AAV59813.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738059|gb|AAV61700.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 447

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 170/470 (36%), Positives = 259/470 (55%), Gaps = 43/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENTVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +      +  +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------VGISTKELSDKFITAFMEDTAQLGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             N++ ++I  +  +I  G AY +  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDP 349
                V+R  +    YR+PI+FT + + +AE+ L     T           +  +  +D 
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLD- 343

Query: 350 AVLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNIS 406
           A  +A+ +D NT + +  L  +A+  ++ N+D  +   F     + GI   +E L+++  
Sbjct: 344 AFQAAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKILQVFGIVFEEETLDED-- 401

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 402 --IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|67809679|gb|AAY81974.1| cysteinyl-tRNA synthetase [Wolbachia pipientis]
          Length = 404

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 174/418 (41%), Positives = 245/418 (58%), Gaps = 36/418 (8%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNAR ++V+DVL++LL++ YG+  VTYVRNITDIDDKII  A ++      N  I  IT
Sbjct: 1   IGNARSVVVYDVLFQLLKFCYGK--VTYVRNITDIDDKIINAASEK------NSNIESIT 52

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
           +   + F  D   + C  PT++P+AT ++  +I LI++++  GHAYE++  + F+  S  
Sbjct: 53  TYYIKAFHDDMESINCKKPTYEPKATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYH 112

Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWH 216
            YG+ S +K DE   G+RV    +KK+P DF+LWK +  ++      W SPWG GRPGWH
Sbjct: 113 EYGALSGKKTDELVPGSRVEVNENKKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWH 172

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECSAMS  YLGK FDIHGGG+DL FPHHENEIAQS  A      A  W+HNGFL +   
Sbjct: 173 IECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEE 232

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS  N + + +LL++   G       VIR A+L THYR+P D+T   +++A+  L+K
Sbjct: 233 KMSKSLFNIVKVRDLLDSGIKG------EVIRYALLKTHYRKPPDWTENVISDAQETLNK 286

Query: 337 WPQTS---------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------L 381
           + + S          S   I    + AL NDLN   A+  LH++A +  K  +      L
Sbjct: 287 FYRLSRGLDTINIDESNAEISKDFIDALKNDLNIPEALAILHEMAAKINKMSNESEKLKL 346

Query: 382 LPIFNASAHILGI--EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              F  SA  +G+     +E     +S   IE+L+  R    + K +++AD IR QL+
Sbjct: 347 TESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLK 404


>gi|332530126|ref|ZP_08406075.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040396|gb|EGI76773.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 475

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 184/477 (38%), Positives = 256/477 (53%), Gaps = 52/477 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R +  F +++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+   G +
Sbjct: 3   LRIYNTLSRALEPFVSLEPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKAS-GWR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I  +T +      +D   L    PTH+PR
Sbjct: 62  -VTYVRNITDIDDKIIQRALKN------GETIRGLTDRMIAALHQDADALGIQRPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           A +++PQM+ LI  +   G AY        A+ ++ +     P YG  S + +DE + G 
Sbjct: 115 AMDYVPQMLDLIGQLERQGLAYRVPGQAGGASGDVNYSVRKFPGYGKLSGKSLDELRAGE 174

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           RV     K++P DF+LWK +   EP    W+SP+G GRPGWHIECSAMS   LG+ FDIH
Sbjct: 175 RVAVLDGKQDPLDFVLWKSAKADEPAEAQWQSPYGAGRPGWHIECSAMSCALLGESFDIH 234

Query: 235 GGGLDLIFPHHENEIAQS-----CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           GGG DL FPHHENEIAQS       A+  +  A  W+HNGF+ ++  KMSKS GNF TI 
Sbjct: 235 GGGADLQFPHHENEIAQSEGAKIGAANEGQPMARYWMHNGFVRVDNEKMSKSLGNFFTIR 294

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------ 337
           E+L+        + A  +R  +L  HYR P+++    L +A   L +             
Sbjct: 295 EVLQ-------KYDAQTVRFFILRAHYRSPLNYGDAHLDDARSALKRLYTALQATPPAPM 347

Query: 338 -PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI 394
            PQT            +A+  D  T  A+  L  LA E   T +  L  +  A    LG+
Sbjct: 348 APQTVDWTEGHAARFKAAMDEDFGTPEAVAVLFDLATEVNKTGSARLAALLKALGGCLGL 407

Query: 395 --EVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E     L    S      AI+ L+ +R      K F+ AD IR++L ++G +L+D
Sbjct: 408 LQEDPVAFLQSGASAALDASAIDSLIAQRAAAKAAKNFAEADRIRQELLAQGIVLKD 464


>gi|218895225|ref|YP_002443636.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226735046|sp|B7ISZ9|SYC_BACC2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218541053|gb|ACK93447.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 465

 Score =  296 bits (759), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 179/487 (36%), Positives = 264/487 (54%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTS------KGIID 348
            +IR  ML  HYR PI+F+          ++R+  A   L    ++ST       K +++
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLVE 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA-------HIL 392
                 A   A+ +D NT +AI  L+ +A  + +     H    +  A          IL
Sbjct: 347 IEKFQTAFEEAMNDDFNTANAITELYNVANYANQYLLEEHTSKVVIEAYVKQLETLFDIL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+E+ +    + +   IE+L+Q+R+   K + F+ +D IR  L+ +  ILED        
Sbjct: 407 GLELTQ---EELLDEEIEELIQKRIEARKNRDFALSDQIRDDLKGRNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|313124319|ref|YP_004034578.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280882|gb|ADQ61601.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 474

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 180/496 (36%), Positives = 269/496 (54%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARAEGTTVPE------LAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSKENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PAVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----N 386
           P +            +A+ +D N  +A+ A+++        A     + + L +F     
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K    +  N    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGNDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
              P    + TRW ++
Sbjct: 465 --TP----QGTRWSRE 474


>gi|229552880|ref|ZP_04441605.1| cysteine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258540510|ref|YP_003175009.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229313749|gb|EEN79722.1| cysteine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257152186|emb|CAR91158.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 468

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 182/492 (36%), Positives = 267/492 (54%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A +   + P++ A   I +     F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIITAAHKTGEA-PLDLAQRFIDA-----FMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           A+  IP ++  +Q++I  G+AY  + ++ +      +YG  S + +DE + G       E
Sbjct: 114 ASQMIPDIVDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQE 173

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  KK +P DF LWK + P E  W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   ++    W+HNGF+ +  + +KMSKS GNFIT++++L+T    
Sbjct: 234 EFPHHENEIAQS-EAKTGKQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDILKTVD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI--- 346
                  V+R  M  T YR PI ++   L  A   L++         + + + + G+   
Sbjct: 291 -----PQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAADGVDAQ 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKN---HDLLPIFNAS 388
                  +    ++A+ +D+N  + +  L  LA+        ++ K    +DLL  ++A 
Sbjct: 346 ITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+         N+   I+ LV+ R      K F+ +D IR QL ++G ILED    
Sbjct: 406 LQIFGVVFTDP---TNLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDTP-- 460

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 461 ----QGTRWRRK 468


>gi|294637579|ref|ZP_06715861.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089250|gb|EFE21811.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 363

 Score =  296 bits (758), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 154/378 (40%), Positives = 220/378 (58%), Gaps = 26/378 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +        ++   +T +   +  +D   L    P  +PR
Sbjct: 60  TLKYVRNVTDVDDKIIKRALEN------KESCEQLTERMLAEMHRDFDALNIARPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY A+N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSTCA-HDGAYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV--------LSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +     PA          +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDATAQPAADEAFEGRFRAA 345

Query: 355 LYNDLNTVSAIQALHKLA 372
           + +D NT  A   L  +A
Sbjct: 346 MDDDFNTPEAYSVLFDMA 363


>gi|315221317|ref|ZP_07863240.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189676|gb|EFU23368.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 447

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 172/460 (37%), Positives = 246/460 (53%), Gaps = 38/460 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ H+GNAR    FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLRKFVPLEEGKVKMYVCGPTVYNYIHVGNARSTAAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E  + P       +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEEGIT-PQE-----VADKYIAAFREDVTALGVQPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++  +I  +Q ++  G AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVDYMTDIIDFVQVLVDKGFAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK   P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAVKPGEIFWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT+++ L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKTID---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN- 357
                V+R      +YR+PI+FT + + +AE+ L     T      G +D   L A  + 
Sbjct: 288 ---GQVLRFFFATQYYRKPINFTEKAVHDAEVNLKYLKNTYEQPFTGTVDLTELQAFLDK 344

Query: 358 -------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISI 407
                  D N  + I  + +LA+     H    +  A A +L   GI    E L+ +   
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGHYSQEVKTAFAELLQVFGIVFTAEVLDAD--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            IE L+++R      K F++AD IR +L +KG  L D K+
Sbjct: 402 -IEALIEQRQAARVAKDFATADKIRDELAAKGIKLLDTKD 440


>gi|187631664|sp|A4W7I4|SYC_ENT38 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 263/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 60  TLKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIHEIIEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS  NF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHGGEYV-NYWMHSGMVMVDREKMSKSLDNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         +  
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEARFIDV 345

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILG-IEVCKEHL---- 401
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E      
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPETFLQSG 405

Query: 402 --NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             N    +A IE L+  RL   + K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQNDGDEVAKIEALITARLEARQAKDWAAADAARNRLTEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|313635089|gb|EFS01438.1| cysteinyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 471

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 174/475 (36%), Positives = 253/475 (53%), Gaps = 53/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIKAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S + + E + G RV     
Sbjct: 115 VTENMDEIIQLINTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DLIFPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HE+EIAQS  A    KT AN W+HN FLN++G KMSKS GNFIT++++L+          
Sbjct: 235 HEDEIAQSEAA--TGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------D 285

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGI------- 346
             VIR  ML  HYR+PI             ++RL  A   +    QT   + +       
Sbjct: 286 PNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQDE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARES----TKN-------HDLLPIFNAS 388
                  +  A    + +D NT +AI   H+LA+ +    +K         + L +    
Sbjct: 346 WLEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRLF 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           A +LG+++            +E L++ERL     + F+ AD IR  L+ K  ILE
Sbjct: 406 AEVLGLKLEYTQTESLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILE 460


>gi|107028742|ref|YP_625837.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690099|ref|YP_835722.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|254247826|ref|ZP_04941147.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|123370109|sp|Q1BHP1|SYC_BURCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200131|sp|A0K8K2|SYC_BURCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|105897906|gb|ABF80864.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648188|gb|ABK08829.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|124872602|gb|EAY64318.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 465

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 178/472 (37%), Positives = 250/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D T L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDETALGIQRPDVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      +YG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   EP    W S +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDTLALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQASGAAQAGGLAADEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALED 454


>gi|260102407|ref|ZP_05752644.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083775|gb|EEW67895.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 476

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 184/503 (36%), Positives = 266/503 (52%), Gaps = 82/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y  G K
Sbjct: 4   VKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYK-GYK 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 116 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSK 344
             +     V+R  M    YR  I+++ + L +A  +L ++  T             S   
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 347

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+         A+ +D N  +A+ A+          +DLLPI NA+A+       
Sbjct: 348 DELAKAIAKTNEKFEVAMDDDFNVQNALTAI----------YDLLPIVNANANAEKADKK 397

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + GI+   +C +  + N    I++LV++R    K K ++++D IR 
Sbjct: 398 SLKLFKDKLSAWLLVFGIDTEKLCSQSADSNDE--IDQLVKKRDEARKKKDWATSDQIRD 455

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 456 QLKEMGITIQD--TP-QGTRWTR 475


>gi|145570618|gb|ABP79724.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 436

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 178/444 (40%), Positives = 245/444 (55%), Gaps = 40/444 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYDF HIG+AR M+ FDV+ R LR+   +  VTYVRNITDIDDKII RA +  
Sbjct: 1   MYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD--VTYVRNITDIDDKIIRRASEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 +    +  +      +D TRL  L P  +PRAT+HI  M  +IQ +I  G AY 
Sbjct: 58  -----GEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAGMHTMIQTLIDKGFAYA 112

Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
             N ++ +       YG  SRRKI++ K+G R+     K++P DF+LWK + P EP W+S
Sbjct: 113 PGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDFVLWKGAKPGEPSWDS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECS MS+  LG+ FDIHGGG DL+FPHHENEIAQS  A   +  AN W+
Sbjct: 173 PWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATG-KLYANAWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G + ++G KMSKS GNF TI E+LE        +   V+R  ++ +HYR PI+++   
Sbjct: 232 HAGAVRVDGEKMSKSLGNFFTIREVLE-------KYHPEVVRYLLVSSHYRSPINYSEDS 284

Query: 327 LTEAEILLSKW-------PQTSTSKGIIDPA-VLSALYNDLNTVSAIQALHKLARESTKN 378
           L EA+  L ++       P+   + G    A   +A+ +D N+  A   L ++ RE  + 
Sbjct: 285 LREAKSALERFYNGLKGLPEAQPAGGDEFVARFAAAMDDDFNSPEACAVLFEMIREVNRL 344

Query: 379 HDLLPIFNASAH--------ILGIEVCKEH-------LNKNISIAIEKLVQERLILLKMK 423
            +      A+          +LG+   +           K  +  +E L+  RL     K
Sbjct: 345 READLAAAAALAARLKVLAGVLGVLQLEPDAFLQAGAAGKVDAAEVEALIAARLAARAEK 404

Query: 424 KFSSADYIRKQLESKGFILEDYKN 447
            +  +D IR QL + G +LED K 
Sbjct: 405 NWGESDRIRDQLTAMGVVLEDGKG 428


>gi|291482466|dbj|BAI83541.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 466

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 172/488 (35%), Positives = 257/488 (52%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   + 
Sbjct: 3   ITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I+ +  + + +D   L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------ISERFIKAYFEDVGALGCRKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
              ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+     
Sbjct: 115 VMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT A  W+HNG++N++  KMSKS GNF+ +++++       +   
Sbjct: 235 HENEIAQSEAL--TGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIIDP---- 349
             ++R  ML  HYR PI+++ +          RL  A   L     +ST+    D     
Sbjct: 286 PQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWLE 345

Query: 350 -------AVLSALYNDLNTVSAIQALHKLAREST----KNHD-------LLPIFNASAHI 391
                  A   A+ +D NT +AI  L  LA+ +     K+H         + +F+    +
Sbjct: 346 KVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVSV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED       
Sbjct: 406 LGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILED------T 456

Query: 452 QRMTRWKQ 459
            + TRWK+
Sbjct: 457 AQGTRWKR 464


>gi|300811849|ref|ZP_07092315.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497168|gb|EFK32224.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 474

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 180/496 (36%), Positives = 268/496 (54%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARAEGTTVPE------LAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ IP +I  IQ +I  G+AYE + ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYETDGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKVADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L+T   
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDILKTVD- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
                   V+R  M    YR  ID++ + L +A  +L ++  T           ++G+ D
Sbjct: 291 ------PQVLRFFMASVQYRSQIDYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PAVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----N 386
           P +            +A+ +D N  +A+ A+++        A     + + L +F     
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K    +  +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
              P    + TRW ++
Sbjct: 465 --TP----QGTRWSRE 474


>gi|257057469|ref|YP_003135301.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256587341|gb|ACU98474.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 459

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 173/469 (36%), Positives = 249/469 (53%), Gaps = 46/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R++ EF+        MY+CG TV    HIG+ R  + +DVL R L   +   
Sbjct: 3   LQLFDTAARQVREFRPARSGTASMYICGATVQGVPHIGHVRGALNYDVLRRWL--VHSGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A +     P  +      + + + F      L CL P+  PR
Sbjct: 61  DVLMVRNVTDIDDKILTKAAE--AGRPWWE----WAATHERAFEDAYAALGCLPPSVTPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI LIQ +I  GHAY A   + F  S+  +YG  S +++DE + G    E   
Sbjct: 115 ATGHITQMIELIQRLIDSGHAYAAEGNVYFSVSTFDSYGQLSGQRLDEVQQGETQSEG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W +PWGRGRPGWH+ECSAM++ YLG  FDIHGGG+DL+FPH
Sbjct: 173 KRDPRDFTLWKASKPGEPSWPTPWGRGRPGWHLECSAMATTYLGSEFDIHGGGVDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS  A   +  A  W+HN ++ L G KMSKS GN + I E+L       R + A
Sbjct: 233 HENERAQSMAAG--DGFARYWLHNAWVTLAGEKMSKSLGNVVAIPEML-------RRYRA 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSK---GIIDPAVLSA 354
             +R  ++  HYR  I+++   L+E+       E  L +  Q+ST +   G +     +A
Sbjct: 284 VELRAYLIQPHYRSTIEYSDAALSESAQGYRRIEQFLRR-VQSSTGEVQVGRVPAEFAAA 342

Query: 355 LYNDLNTVSAIQALHKLARES---------TKNHDLLPIFNASAHILGIEVCKEHLNKN- 404
           L +DL T  A   LH   R+          T+   L     A   +LGI+   E   +  
Sbjct: 343 LDDDLGTPQAFAVLHNTVRDGNAALDSAKETEARQLAETVRAMVDVLGIDPLSEQWAEQG 402

Query: 405 ------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                 ++  ++ +++ER      + F++AD IR +L   G  +ED  N
Sbjct: 403 GAEAEVLARLVDAMLEERQQARANRDFATADAIRDRLIEAGIAVEDTPN 451


>gi|116627043|ref|YP_819662.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100320|gb|ABJ65466.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312277506|gb|ADQ62163.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
           ND03]
          Length = 447

 Score =  296 bits (758), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 170/470 (36%), Positives = 259/470 (55%), Gaps = 43/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENTVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +      +  +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------VGISTKELSDKFITAFMEDTAQLGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             N++ ++I  +  +I  G AY +  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDP 349
                V+R  +    YR+PI+FT + + +AE+ L     T           +  +  +D 
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLD- 343

Query: 350 AVLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNKNIS 406
           A  +A+ +D NT + +  L  +A+  ++ N+D  +   F     + GI   +E L+++  
Sbjct: 344 AFQAAMDDDFNTANGVTVLFDMAKWINSGNYDETVKNAFEKILQVFGIVFEEETLDED-- 401

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 402 --IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 488

 Score =  296 bits (757), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 177/502 (35%), Positives = 260/502 (51%), Gaps = 68/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++IK+YNTL  + T F+ + P  +++YVCG T Y+  HIGNARP + +DV+ R L++  G
Sbjct: 9   EEIKVYNTLTGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKHI-G 67

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V +V+N TD+DDKII +A  E            I+ +    + +    +        
Sbjct: 68  YK-VEFVQNFTDVDDKIINKANAEGSDW------KTISDRYIDAYFQVMDAMHVRRADVY 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR ++H+  +I ++Q +I  GHAY   N++ +D S+  +YG+ S RKID+   G R+   
Sbjct: 121 PRVSDHMQDIIDMVQGLIDKGHAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARIEVN 180

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK + P EP WESPWG+GRPGWHIECSAMS HYLGK FD HGGG DLIF
Sbjct: 181 EGKRNPGDFALWKGAKPGEPFWESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSDLIF 240

Query: 243 PHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS  C      K  N W+HNGF+ +   KMSKS  NF    ++L       +
Sbjct: 241 PHHENEIAQSEGCTG---CKFVNYWLHNGFITINSEKMSKSLNNFFLAKDVL-------K 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------QTSTSK 344
            +    +R  +L   YR P+D++  RL EAE  + +                  +T  S+
Sbjct: 291 EYSGDALRYFLLSVQYRNPLDYSRDRLDEAEKNMERLSGVIRRLKELAAKEGAEKTDASR 350

Query: 345 GIIDPAVLS------ALYNDLNTVSAIQALHKLARE------------STKNHDLLPIFN 386
            +   A  S      A+ +D NT  A  A+  LA+             S  +  +   + 
Sbjct: 351 SLEKAAEESLKAFHEAMDDDFNTGLATGAMFDLAKAINIYGTAVDGGLSVDHEAVEKAYT 410

Query: 387 ASAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           A   I+ I    E +        +K+ +  ++ ++  R    K K +  AD IR +L++ 
Sbjct: 411 ALKTIMDILGILEEVWEKTDSPDDKSYNDLMDIILAVRQTARKEKMYKIADEIRDRLDAA 470

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G ++ED           RWK++
Sbjct: 471 GIVIEDTPTG------ARWKRR 486


>gi|325685668|gb|EGD27750.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 474

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 180/496 (36%), Positives = 269/496 (54%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARAEGTTVPE------LAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSKENLEQAANILGRFKNTLEGINYRLADETEGLPD 344

Query: 349 PAVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----N 386
           P +            +A+ +D N  +A+ A+++        A     + + L +F     
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K    +  N    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGNDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
              P    + TRW ++
Sbjct: 465 --TP----QGTRWSRE 474


>gi|18312206|ref|NP_558873.1| cysteinyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|21264010|sp|Q8ZYD8|SYC_PYRAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|18159644|gb|AAL63055.1| cysteinyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 474

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 185/484 (38%), Positives = 261/484 (53%), Gaps = 55/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 3   VRIYNTATRQVEEFVTYVPKLARGYVCGITPYDHVHVGHGRVYVFFDMFRRYLEARGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTH 121
            V  V N TDIDDKII +AR+E      +DA      +  +   +F + + +L  + P H
Sbjct: 62  -VRLVINFTDIDDKIINKAREEFG----HDAYKRWKEVPERYIAEFFEMSNKL-FIKPAH 115

Query: 122 Q-PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T ++ +M+  I  ++  G+AY A +  + F+   +PNYG  SR+KI+E   G RV
Sbjct: 116 AYPRVTENVNEMVAWISTLVEKGYAYVAPDGSVYFEVGKVPNYGVLSRQKIEELIAGARV 175

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             +  KKNP DF LWK  TP EP W SPW  GRPGWH+EC  MS+ YLG  FD HGGG D
Sbjct: 176 EPEPGKKNPLDFALWKSWTPGEPWWNSPWCPGRPGWHLECVVMSTKYLGAPFDFHGGGAD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L   K+ G
Sbjct: 236 LIFPHHENEIAIAKAYYGLDNFAKYWIHVGYLTVRGEKMSKSLGNVITLREVL--SKYSG 293

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTS------------ 343
            +     +RLA  M+HYR+P++F+ + L +AE     L + + + S +            
Sbjct: 294 EA-----LRLAYAMSHYRKPMEFSFELLDQAEEMVKTLYTAYDELSQAVADASDEDKEKL 348

Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLARE--STKNH-----------DLLPIFNASA 389
             G    +  +AL +D +T  A Q L+ LAR   ST  H           D+L  +   A
Sbjct: 349 EYGKYIESFYAALEDDFSTPQAAQQLYGLARYIISTVLHRIDKASRQTAIDVLTQYVKMA 408

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            ILG+ + +  + K +   I+ +V+ R  L + K +  ADY+R++L   G  L D+    
Sbjct: 409 DILGV-LERREIPKEVEEVIKAVVEARARLRREKMYQLADYLRERLAGIGVELHDF---- 463

Query: 450 NGQR 453
            GQR
Sbjct: 464 -GQR 466


>gi|170733433|ref|YP_001765380.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|229558621|sp|B1JUK8|SYC_BURCC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169816675|gb|ACA91258.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 465

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 178/472 (37%), Positives = 250/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D T L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDETALGIQRPDVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      +YG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   EP    W S +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKRAKEDEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDTLALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHGQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQASGAAQAGGLAADEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALED 454


>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 485

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 178/491 (36%), Positives = 249/491 (50%), Gaps = 67/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT+ R    F  + P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQLFNTMARAKEPFSPLHPCKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII++A  E  +       + I  +    F +D  +L  L    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKKAASEGATC------AGIAERYIAAFYEDMDKLGILRADAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  M  + + +I  GHAY   + ++ F   S  +YG  S R I++ + G RV    
Sbjct: 113 ATEYVAAMADMAERLIETGHAYRTPSGDVYFRVRSFADYGKLSGRDIEDMRAGARVAPGD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP WESP+G GRPGWH+ECS MS   LG  FDIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E     W+HNGF+ +   KMSKS GNFITI ++ +      R  P
Sbjct: 233 HHENEIAQSEAATGKE-FCRFWVHNGFVRINTEKMSKSLGNFITIRDIYK------RYLP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----------------ILLSKWPQTSTSKGII 347
             V+R  ++ +HYR P+D++ Q L EAE                +  +KW  T     I 
Sbjct: 286 -EVLRFFLVASHYRSPLDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTKLPAEIA 344

Query: 348 DP------AVLSALYNDLNTVSAI----------------QALHKLARESTKNHDLLPIF 385
           +         ++A+ +D NT  A+                + L K A  +     +L  F
Sbjct: 345 EELARHEQGFIAAMDDDCNTAQALGHVFGAVRLAGRLLEDKTLAKSAETADILRRILADF 404

Query: 386 NASAHILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
              + ILG+            + C+          ++ LV ER    K K F  +D IR 
Sbjct: 405 ETWSGILGVCGRDSREFLDALKACRAARLGIDPTRVDALVAERQDARKAKDFPRSDAIRD 464

Query: 434 QLESKGFILED 444
           +L + G  + D
Sbjct: 465 ELATLGVTVMD 475


>gi|146310641|ref|YP_001175715.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145317517|gb|ABP59664.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 465

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 182/482 (37%), Positives = 263/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+     
Sbjct: 6   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFL--GY 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 64  TLKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   + P YG  SR+ +++ + G RV    
Sbjct: 118 ATHHIHEIIEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGARVDVVD 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 178 VKRNPMDFVLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS  NF T+ ++L       + + 
Sbjct: 238 HHENEIAQSTCAHGGEYV-NYWMHSGMVMVDREKMSKSLDNFFTVRDVL-------KYYD 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L + +     +   + PA         +  
Sbjct: 290 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEARFIDV 349

Query: 355 LYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAH------ILG-IEVCKEHL---- 401
           + +D NT  A   L  +ARE    K  D+      ++H      +LG +E   E      
Sbjct: 350 MNDDFNTPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPETFLQSG 409

Query: 402 --NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             N    +A IE L+  RL   + K +++AD  R +L   G +LED      G + T W+
Sbjct: 410 AQNDGDEVAKIEALITARLEARQAKDWAAADAARNRLTEMGIVLED------GPQGTIWR 463

Query: 459 QK 460
           +K
Sbjct: 464 RK 465


>gi|290959417|ref|YP_003490599.1| cysteine--tRNA ligase [Streptomyces scabiei 87.22]
 gi|260648943|emb|CBG72057.1| cysteine--tRNA ligase [Streptomyces scabiei 87.22]
          Length = 467

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 174/489 (35%), Positives = 256/489 (52%), Gaps = 57/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERAR-QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT+VRN+TDIDDKII +A  Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFVRNVTDIDDKIIVKAADQGRPWWSIG-------YENERAFNDGYGVLGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+ +M+ +++ +I  GHAYEA+  + FD  S P Y   S +++D     +   E  
Sbjct: 114 RATGHVTEMVEMMRGLIERGHAYEADGNVYFDVRSFPGYLQLSNQELDNLLQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIFP
Sbjct: 173 GKRDPRDFAMWKSAKPGEPTWETPWGRGRPGWHLECSAMAHKYLGTAFDIHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQAKAFG--DDFATYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--GIIDPAV------L 352
             V+R  +   HYR  I+++   L EAE   ++   + Q    K  G+++PA        
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEAALREAESAFARIEGFVQRVIEKAGGVVEPAAEVPPAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKN-------------------HDLLPIFNASAHILG 393
            A+ +DL    A+  +H   R+                         +L +    AH  G
Sbjct: 344 EAMDDDLGVPQALAVVHTTVRQGNSALAADDKEEAVARLAEVRAMLGVLGLDPLDAHWAG 403

Query: 394 IEVCK-EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            E  + E L+  +   +  ++Q+R      K +++AD IR QL   G  +ED   PD   
Sbjct: 404 AEGDRGEDLHGVVDTLVGLVLQQREAARARKDWATADAIRDQLNQSGLAIED--GPDG-- 459

Query: 453 RMTRWKQKP 461
              RW   P
Sbjct: 460 --PRWTLGP 466


>gi|191639246|ref|YP_001988412.1| cysteinyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239630171|ref|ZP_04673202.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|187631657|sp|Q035S0|SYC_LACC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558712|sp|B3WA35|SYC_LACCB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|190713548|emb|CAQ67554.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Lactobacillus casei BL23]
 gi|239527783|gb|EEQ66784.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327383326|gb|AEA54802.1| Cysteinyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386509|gb|AEA57983.1| Cysteinyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 468

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 184/492 (37%), Positives = 262/492 (53%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ RK   F  + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   LTLYNTMSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYR-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A +   + P++ A   I +     F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIINAAHKTGEA-PLDLAQRFIDA-----FMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           A+  IP +I  +Q++I   +AY  + ++ +      +YG  S + +DE + G        
Sbjct: 114 ASQMIPDIIEFVQDLIDKEYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   ++    W+HNGF+ +  +  KMSKS GNFIT++++ +T    
Sbjct: 234 EFPHHENEIAQS-EAKTDKQFVRYWMHNGFVTIGEDDEKMSKSLGNFITVHDIRKTVD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
                  V+R  M  T YR PI ++   L  A   L++                    PQ
Sbjct: 291 -----PQVLRFFMAGTQYRMPIRYSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQ 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKN---HDLLPIFNAS 388
            +     +    ++A+ +D+N  + +  L  LA+        E+ K+   +DLL  ++A 
Sbjct: 346 ITKQLQTLKDRFVTAMDDDINVQNGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+    +   K++   I+ LV+ R      K F+ +D IR QL ++G ILED   P
Sbjct: 406 LQIFGVVFADQ---KSLDADIDALVKARDAARAAKDFAKSDQIRDQLAAQGIILED--TP 460

Query: 449 DNGQRMTRWKQK 460
                 TRW+++
Sbjct: 461 QG----TRWRRQ 468


>gi|161506926|ref|YP_001576880.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048174|sp|A8YTD3|SYC_LACH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160347915|gb|ABX26589.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 476

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 185/503 (36%), Positives = 265/503 (52%), Gaps = 82/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y  G K
Sbjct: 4   VKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYK-GYK 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  IQ +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 116 ATHEIKEIIAFIQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSK 344
             +     V+R  M    YR  I+++ + L +A  +L ++  T             S   
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 347

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+         A+ +D N  +A+ A+          +DLLPI NA+A+       
Sbjct: 348 DELAKAIAKTNEKFEVAMDDDFNVQNALTAI----------YDLLPIVNANANAEKADKK 397

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + GI+   +C +    N    I++LV++R    K K ++++D IR 
Sbjct: 398 SLKLFKDKLSAWLLVFGIDTEKLCSQSAGSNDE--IDQLVKKRDEARKKKDWATSDQIRD 455

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 456 QLKEMGITIQD--TP-QGTRWTR 475


>gi|288904445|ref|YP_003429666.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325977441|ref|YP_004287157.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731170|emb|CBI12718.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325177369|emb|CBZ47413.1| cysS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 448

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 173/469 (36%), Positives = 256/469 (54%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y  G K
Sbjct: 3   IKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D  +L     T  PR
Sbjct: 62  -VNYISNFTDVDDKIIKGAAEAGMDT------KAFSDKFIAAFMEDVKQLGVKPATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-E 181
             +++ ++I  ++ ++  G AYEAN ++ F  +   NY   + + + + ++G   RV  E
Sbjct: 115 VIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVDGE 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 175 GEIKENPLDFALWKSAHPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGADLE 234

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L       +
Sbjct: 235 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVL------ 352
           +    V+R  +    YR+P++FT + + +A + L     T T       D A L      
Sbjct: 286 NVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKAD 345

Query: 353 --SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + I  +  +A+       N  +   F     + GI   +E L+ +   
Sbjct: 346 FEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEEVLDAD--- 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+++R      K F++AD IR QL ++G  L D K   +G R TR
Sbjct: 403 -IEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTK---DGVRWTR 447


>gi|199598530|ref|ZP_03211947.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199590572|gb|EDY98661.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 468

 Score =  296 bits (757), Expect = 6e-78,   Method: Compositional matrix adjust.
 Identities = 183/492 (37%), Positives = 263/492 (53%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 2   LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYR-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A +   + P++ A   I +     F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIITAAHKTGEA-PLDLAQRFIDA-----FMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           A+  IP +I  +Q++I  G+AY  + ++ +      +YG  S + +DE + G       E
Sbjct: 114 ASQMIPDIIDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQE 173

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  KK +P DF LWK + P E  W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   ++    W+HNGF+ +  + +KMSKS GNFIT++++L+T    
Sbjct: 234 EFPHHENEIAQS-EAKTGKQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDILKTVD-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
                  V+R  M  T YR PI ++   L  A   L++                     Q
Sbjct: 291 -----PQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAVAGVDAQ 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKN---HDLLPIFNAS 388
            +     +    ++A+ +D+N  + +  L  LA+        ++ K    +DLL  ++A 
Sbjct: 346 ITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+         N+   I+ LV+ R      K F+ +D IR QL ++G ILED    
Sbjct: 406 LQIFGVVFTDP---TNLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDTP-- 460

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 461 ----QGTRWRRK 468


>gi|254517452|ref|ZP_05129508.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911201|gb|EEH96402.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 466

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 170/488 (34%), Positives = 255/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L RK  EF  + P  I+MYVCGPTVY++ HIGN R  I+FD + R   Y  G K
Sbjct: 1   MRVYNSLTRKKEEFIPLTPGEIKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYFEYR-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++      S I  +   ++ KD   L  +  +  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKKANEEGTTV------SDIGDRYIDEYYKDADGLNIMRASINPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I  ++ +I  G+AYE + ++ F T    +YG    + +++ + G R+     
Sbjct: 113 ATEYIQDIIEFVKGLIEKGYAYEVDGDVYFRTKKFESYGKLIGQNLEDLQAGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK   P EP WESPWG GRPGWHIECS M+   LG   DIH GG+DL FPH
Sbjct: 173 KEDPMDFAVWKAQKPGEPAWESPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLAFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+H  FLN+  +KMSKS  NF+T  ++L       + + A
Sbjct: 233 HENEIAQSEALTG-KPFARYWLHGAFLNINNQKMSKSLNNFLTARDIL-------KQYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA------------- 350
            V+R  ML  HYR  ++F+   L  A+  + + +   S  + +ID               
Sbjct: 285 DVVRFLMLSGHYRVQLNFSDDLLESAKASVERLYNAVSNLENLIDEVKKESMDDKEKAYL 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI A+  L ++   N  +          L +     + 
Sbjct: 345 EFLDVYRQRYIEKMDDDFNTADAITAIFDLIKDINTNVSIESSRELCEAALSLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +     ++   IE+L+ ER    K + F+ AD IR  L+++  +LED   P   
Sbjct: 405 LGI--LQNSTKGSLEEEIERLIAERQQARKDRNFALADKIRNDLKARNIVLED--TP--- 457

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 458 -QGVRWKK 464


>gi|119510000|ref|ZP_01629141.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119465324|gb|EAW46220.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 477

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 251/494 (50%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F  ++P  ++MY CG TVYD+ H+G+AR  IV+DV+ R L++   E 
Sbjct: 3   LTLYNTLTRRQEAFATVEPGKVKMYYCGVTVYDYCHLGHARACIVWDVVRRYLQFIGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI++R+R+EH S+        +  +    + +D  RL        PR
Sbjct: 62  -VRYIQNFTDIDDKILKRSREEHSSM------EAVAERYINAYFEDMGRLGIKPADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  LI  +   G AY A+ ++ +       YG  S RK+++ + G   RV   
Sbjct: 115 ATHTMNGIQRLIHELENKGFAYPADGDVYYAVRQFNEYGKLSGRKLEDMQAGASERVQVE 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KK+P DF LWK + P EP WES WG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 175 DPEYQKKKDPFDFALWKAAKPGEPAWESSWGAGRPGWHIECSAMVRDRLGDTIDIHAGGA 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNF TI +LL+     
Sbjct: 235 DLIFPHHENEIAQSEAVTG-KPLATYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWPQTSTSKG----- 345
            R      +RL +LM  YR+PIDFT   +  A        E LL  +       G     
Sbjct: 289 -RGVEPMAVRLFVLMAQYRKPIDFTDDAIAAATNGWHTLKEGLLFGYEYGGVGSGEKLTS 347

Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNA 387
            I       A+ +D N    +  L +LA+E  +  +++                      
Sbjct: 348 EIHIQRFQEAVNDDFNFPGGLAVLFELAKELRRQGNIIVHQGKTETSPEELQKQWQTLVI 407

Query: 388 SAHILGIEVCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            A + G+    E  N  I       IE L+Q+R    K K F+ +D IR QL+++G  L 
Sbjct: 408 LAEVFGLVAQPEAENAIIEGLSDAEIENLIQQRQAARKSKNFAESDRIRDQLQAEGITLI 467

Query: 444 DYKNPDNGQRMTRW 457
           D ++       TRW
Sbjct: 468 DSRDG------TRW 475


>gi|228477775|ref|ZP_04062403.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250467|gb|EEK09681.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 447

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 171/473 (36%), Positives = 260/473 (54%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +   S         ++ K    F++DT +L     T 
Sbjct: 57  CGYTVNYISNFTDVDDKIIKAANEAGIST------KELSDKFIAAFMEDTGQLGIKPATQ 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
            PR  N++ ++I  +  ++  G AY +  ++ F  +   NY   + + +++ ++G     
Sbjct: 111 NPRVINYMDEIITFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRT 170

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG 
Sbjct: 171 DAETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T   
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTV-- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
                   V+R  +    YR+PI+FT + + +AE+ L K+ + + S  + +         
Sbjct: 287 -----DGQVLRFFLATQQYRKPINFTEKAIHDAEVNL-KYLKNTHSLPLTEQVNQAELQT 340

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARE-STKNHD--LLPIFNASAHILGIEVCKEHLNK 403
              A   A+ +D NT + +  L  +A+  ++ N+D  +   F     + GI   +E L++
Sbjct: 341 YLDAFQEAMDDDFNTANGVTVLFDMAKWINSGNYDQTVKDAFEKMLQVFGIVFEEEVLDE 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 401 D----IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|188590724|ref|YP_001919652.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|251778988|ref|ZP_04821908.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|229558624|sp|B2UY90|SYC_CLOBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188501005|gb|ACD54141.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243083303|gb|EES49193.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 470

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 167/479 (34%), Positives = 256/479 (53%), Gaps = 59/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  EF  I P  ++MYVCGPTVY+F HIGN R  IVFD + R L Y   + 
Sbjct: 1   MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++        I  K  +++ +D  +L     T  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKKANEEGTTV------KEIGDKYIKEYYEDADKLQIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
           AT +I  +I  +  +I  G+AYE   ++ F+T    +YG  S + I++ +MG    T   
Sbjct: 113 ATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSV 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK+P DF +WK   P EP W+ PWG GRPGWHIECS M+   LG   DIH GG+DL
Sbjct: 173 ADERKKDPMDFAIWKSQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE+AQS     ++  AN W+H+ ++N+  +KMSKS  NF T  ++L       +
Sbjct: 233 TFPHHENEVAQSEALTGVQ-FANYWMHSAYVNINNQKMSKSLNNFFTARDIL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------- 350
            + + V+R  M+  HYR  I+F+   L  A+  + + +      + +ID           
Sbjct: 285 EYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLIDEVSRENMNEEE 344

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL--GIE 395
                         +  + +D NT  A+  L +L +++  N ++    N+S  ++   ++
Sbjct: 345 VRYLNSLNKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINV----NSSKELVNKALD 400

Query: 396 VCKE------HLNK----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +E       L K    ++   IE L+Q+R    K K F+ +D IR  L+ +G +LED
Sbjct: 401 LIRELGAPLGLLQKITKGSLEDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLED 459


>gi|319654847|ref|ZP_08008922.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393410|gb|EFV74173.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 467

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 174/476 (36%), Positives = 252/476 (52%), Gaps = 57/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+  +F  I+   ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IQIYNTLTRQKEDFIPIEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +    +P       I  +    + +D + L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIRVANELGTDVPS------IAERFINAYFEDVSALGCRKADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  I  +I  IQ +I  G AYE+  ++ + T     YG  S + IDE ++G R+     
Sbjct: 115 VTESIDIIIEFIQTLIDKGFAYESEGDVYYHTRKFDEYGKLSHQSIDELRVGARIAVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF+LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDSLDFVLWKAAKEGEIAWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ ++++++           
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFVLVHDIIQKH-------DP 286

Query: 305 PVIRLAMLMTHYREPIDFT--------------------VQRLTEAEILLS----KWPQT 340
            V+R  ML  HYR PI+++                    +Q   EA + L+    +W   
Sbjct: 287 QVLRFFMLSVHYRHPINYSDELLENTRTGLERIKTSYHNLQHRKEASVNLTDNNQEWLDK 346

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPI------FNASA 389
            TS   +    +  + +D NT +A+  L +L++ +      KN  +  I      F    
Sbjct: 347 ITS---LHEQFIQDMDDDFNTANAVSILFELSKLANYYLMEKNTAVEVIDAFTKEFETLF 403

Query: 390 HILGIEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LG+ +  E  N + +   IE+L+++R    K + F  AD IR QL+    ILED
Sbjct: 404 DVLGLSL--EETNADLLDEEIEQLIEQRQQARKERNFELADKIRDQLKEMNIILED 457


>gi|291166310|gb|EFE28356.1| cysteine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 466

 Score =  296 bits (757), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 180/487 (36%), Positives = 261/487 (53%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL R+  EF  I+ + ++MY CGPTVY++ HIGNARP I+FD L   L Y   E 
Sbjct: 1   MRFYNTLTRRKDEFVPIEKNKVKMYSCGPTVYNYFHIGNARPFIIFDTLRNYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII RA +E  S P+      +  K  +++  D   L     +  PR
Sbjct: 60  -VTFVQNFTDVDDKIINRANEEGIS-PLE-----VADKYIKEYFVDADGLGIRRASVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  I  +I  I+ +I  GHAYE + ++ +DT S   YG  SR+ ++E   G R+     
Sbjct: 113 VTECIEDIIEFIEELIQKGHAYEIDGDVYYDTKSFDGYGKLSRQNMEELNAGARIDVDDR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P+DF LWK+    E GW SPWG GRPGWHIECS MS  YLG   DIH GG DLIFPH
Sbjct: 173 KKSPSDFALWKKKKEGEIGWISPWGEGRPGWHIECSVMSRKYLGDTIDIHSGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A+ W+HNG++N+  +KMSKS  NF T+ E+ E           
Sbjct: 233 HENEIAQSEGRSGKE-FAHYWLHNGYININNQKMSKSLNNFFTVREISEVIDL------- 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA------ 350
            ++R  +L   YR P++F+   L  A+  + +   T          ++G+I         
Sbjct: 285 EIVRFFLLSAQYRNPVNFSQDLLDAAKSGMERLYNTKHKVEFLLEQAQGMIKEDEKEFVS 344

Query: 351 --------VLSALYNDLNTVSAIQALHKLAR--------ESTKNH--DLLPIFNASAHIL 392
                    + A+ +DLNT   I A+ +L++        +S+K +  + + IF    ++L
Sbjct: 345 KLPSYRELFIEAMDDDLNTADGISAIFELSKFINTTVSEKSSKEYLQECMNIFCELTNVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            I + K+  +      I +L+++R +  K K F+ AD IR QL   G  + D +      
Sbjct: 405 NI-IQKKKSDGFDEDKINELIEQRSLAKKEKNFAEADRIRGQLHDMGVEVLDTR------ 457

Query: 453 RMTRWKQ 459
           + T WK+
Sbjct: 458 QGTTWKK 464


>gi|319779351|ref|YP_004130264.1| Cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109375|gb|ADU92121.1| Cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 486

 Score =  295 bits (756), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 186/484 (38%), Positives = 263/484 (54%), Gaps = 53/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY++L R+  E + I+ + IRMYVCG TVYDF H+G+AR ++ FDV+ R LRY   + 
Sbjct: 1   MQIYDSLTRQKQELKPIETNKIRMYVCGITVYDFCHLGHARMLVSFDVICRWLRYKGYQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TDIDDKII++A      + +N  ++ IT   T     D   L  L P H+PR
Sbjct: 60  -VNYVRNVTDIDDKIIKKA------VALNKRLNEITQFYTDAMHADERALGVLPPDHEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M+ +I  +   G AY++ +N++ F      +YG  S R ID+ + G RV    
Sbjct: 113 ATDHISGMLEIINKLESKGLAYKSKDNDVNFSVRKFDSYGKLSGRSIDDLRSGERVAISE 172

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   EP    W SP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 173 AKLDPLDFVLWKAAKDSEPEDSKWTSPYGLGRPGWHIECSAMSKELLGLPLDIHGGGPDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------E 293
            FPHHENEIAQS  A  IE  A IW+H G L ++  KMSKS GNF TI + +       +
Sbjct: 233 KFPHHENEIAQSEGAYDIE-LARIWMHCGPLMVDNDKMSKSLGNFKTIRQTVAVGEVSDD 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---TSTSKGIIDPA 350
           + ++      A ++R  ++  HYR   +FT   L +A+  + +  Q   T  +K  I+  
Sbjct: 292 SAEYEFNEREAEMLRFFIVRNHYRSAQNFTPDNLVDAQSAIDRLYQTFGTFDAKDFIESP 351

Query: 351 V----------LSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI---- 394
           +          ++A+ +D NT  A+  L +L  E   TK+ +L  +  A   +LG+    
Sbjct: 352 IDWSNPYAVKFMNAMDDDFNTSLAVSVLFELNTEVNKTKSKELFKLLVALGKLLGLFRVN 411

Query: 395 ---------EVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                       K  ++ +  IA     IE L++ER      K F  AD IR  L++ G 
Sbjct: 412 PRLYFKIPTRYSKTQIDGSGGIAISNNDIEGLIEERKAAKANKDFKKADEIRDYLKATGI 471

Query: 441 ILED 444
            LED
Sbjct: 472 ELED 475


>gi|290579657|ref|YP_003484049.1| putative cysteinyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996556|dbj|BAH87157.1| putative cysteinyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 447

 Score =  295 bits (756), Expect = 7e-78,   Method: Compositional matrix adjust.
 Identities = 172/458 (37%), Positives = 245/458 (53%), Gaps = 34/458 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+TL R + EF  I  + + MYVCGPTVY++ H+GN R  I FD + R   Y     
Sbjct: 2   IKIYDTLTRSLREFVPIHENTVNMYVCGPTVYNYIHVGNGRSAIAFDTIRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +   +         ++ K    F +D   L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAAKAGMTT------KALSDKFIAAFKEDVAALGVKPATENPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV-PE 181
             +++  +I  +Q ++  G AYE++ ++ F      NY + + + ++E ++G   RV  E
Sbjct: 114 VIDYMQDIIDFVQVLVDKGFAYESSGDVYFRVRKSDNYAALANKTLEELEIGASGRVDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 SDCKEDPLDFALWKAAKEGEIAWDSPWGAGRPGWHIECSVMATTILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +K AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKKFANYWMHNGFVNIDNEKMSKSLGNFITVHDALKTM------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL------- 352
               V+R      HYR+P +FT + + +AEI L     T        +D A         
Sbjct: 287 -DGQVLRFFFATQHYRKPFNFTEKAIRDAEINLKYLKNTYEQPFTATVDEATFIRFLEKF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--EVCKEHLNKNISIAI 409
            +A+  D NT + I  + +LA+     H    + +  A IL I   V KE +   +   I
Sbjct: 346 QAAMDEDFNTANGITVVFELAKWINSGHYNQTVKDKFAEILQIFGVVFKEEV---LDAEI 402

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           EKL++ER      + F+ AD IR  L ++G  L D K+
Sbjct: 403 EKLIEERQKARAARDFTKADAIRDDLAAQGIKLLDTKD 440


>gi|328462973|gb|EGF34781.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 473

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 184/503 (36%), Positives = 266/503 (52%), Gaps = 82/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y  G K
Sbjct: 1   MKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 113 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSK 344
             +     V+R  M    YR  I+++ + L +A  +L ++  T             S   
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 344

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+         A+ +D N  +A+ A+          +DLLPI NA+A+       
Sbjct: 345 DELAKAIAKTNEKFEVAMDDDFNVQNALTAI----------YDLLPIVNANANAEKADKK 394

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + GI+   +C +  + N    I++LV++R    K K ++++D IR 
Sbjct: 395 SLKLFKDKLSAWLLVFGIDTEKLCSQSADSNDE--IDQLVKKRDEARKKKDWATSDQIRD 452

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 453 QLKEMGITIQD--TP-QGTRWTR 472


>gi|296158961|ref|ZP_06841789.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295890836|gb|EFG70626.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 465

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 180/471 (38%), Positives = 259/471 (54%), Gaps = 47/471 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +  +   +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIKALHEDADALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A++ ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIERLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  +   HYR P++++   + +A   L++   T+      D A L      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALTRL-YTALKDVTPDGAELDWNEAY 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHLN 402
                +A+ +D NT  A+  L +LA E  +  D      L    A   +LG E  + +L 
Sbjct: 345 AQRFQAAMNDDFNTPVAVSVLFELASEVNRTRDSALARQLRSLGAVIGLLGRE-PRAYLQ 403

Query: 403 KNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +             AIE  +  R    + K F++AD IR +L   G  LED
Sbjct: 404 QAAGTAAVGALEAAAIEAKIAARAAAKQSKDFAAADRIRSELLEAGVALED 454


>gi|296333091|ref|ZP_06875545.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672793|ref|YP_003864464.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149707|gb|EFG90602.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411036|gb|ADM36154.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 466

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 172/488 (35%), Positives = 257/488 (52%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   + 
Sbjct: 3   ITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I+ +  + + +D   L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPA------ISERFIKAYFEDVGALGCRKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
              ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+     
Sbjct: 115 VMENMDAIIDFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT A  W+HNG++N++  KMSKS GNF+ +++++       +   
Sbjct: 235 HENEIAQSEAL--TGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIIDP---- 349
             ++R  ML  HYR PI+++ +          RL  A   L     +ST+    D     
Sbjct: 286 PQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWLE 345

Query: 350 -------AVLSALYNDLNTVSAIQALHKLAREST----KNHD-------LLPIFNASAHI 391
                  A   A+ +D NT +AI  L  LA+ +     K+H         + +F+    +
Sbjct: 346 KVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVSV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED       
Sbjct: 406 LGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILED------T 456

Query: 452 QRMTRWKQ 459
            + TRWK+
Sbjct: 457 AQGTRWKR 464


>gi|187932481|ref|YP_001884454.1| cysteinyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|229558625|sp|B2TIF6|SYC_CLOBB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187720634|gb|ACD21855.1| cysteine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 470

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 168/475 (35%), Positives = 259/475 (54%), Gaps = 51/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  EF  I P  ++MYVCGPTVY+F HIGN R  IVFD + R L Y   E 
Sbjct: 1   MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E  ++        I  K  +++ +D  +L     T  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKKANEEGTTV------KEIGDKYIKEYYEDADKLQIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
           AT +I  +I  +  +I  G+AYE   ++ F+T    +YG  S + I++ +MG    T   
Sbjct: 113 ATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSI 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K +P DF +WK   P EP W+ PWG GRPGWHIECS M+   LG   DIH GG+DL
Sbjct: 173 ADERKNDPMDFAIWKAQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE+AQS     + + AN W+H+ ++N+  +KMSKS  NF T  ++L       +
Sbjct: 233 TFPHHENEVAQSEALTGM-RFANYWMHSAYVNINNQKMSKSLNNFFTARDIL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDF----------TVQRLTEA----EILLSKWPQTSTSKGI 346
            + + V+R  M+  HYR  I+F          +V+RL  A    E L+ +  + + S+  
Sbjct: 285 EYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLIDEVSRENISEEE 344

Query: 347 ID---------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL---LPIFNASAHI--- 391
           ++            +  + +D NT  A+  L +L +++  N ++     + N + ++   
Sbjct: 345 VNYLNSLKKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINVNSSKELVNKALNLIRE 404

Query: 392 LG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG  + + ++    ++   IE L+Q+R    K K F+ +D IR  L+ +G +LED
Sbjct: 405 LGAPLGLLQKITKGSLEDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLED 459


>gi|313884762|ref|ZP_07818517.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620023|gb|EFR31457.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 475

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 179/487 (36%), Positives = 251/487 (51%), Gaps = 71/487 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+  +F    P+ + MYVCGPTVY++ HIGNAR  + FD + R L+Y   + 
Sbjct: 3   IQIYNTLTRQKEDFVPQVPNQVSMYVCGPTVYNYIHIGNARSAVAFDTVRRYLQYRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A+ E  S         ++ K    F +DT  +  L     PR
Sbjct: 62  -VNYVSNFTDVDDKIIKAAKAEDLST------EALSDKYIAAFKEDTAAINILPANIHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
             +HI ++I  I+ +I   HAY +  ++ F T S   YG  S + I E ++G    T   
Sbjct: 115 VKDHITEIIDYIKVLIESDHAYASQGDVYFRTQSFDGYGKLSHQSISELEIGASQRTDTA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   E  W SPWG GRPGWHIECS MS+ YLG   DIHGGG DL
Sbjct: 175 ETDRKEDPLDFALWKSAKEGEVSWPSPWGPGRPGWHIECSVMSTKYLGDTLDIHGGGQDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQ+   +  E  AN W+HNGF+    +G KMSKS GNF+ + +LL      
Sbjct: 235 EFPHHENEIAQAEAHNHGENFANYWMHNGFVTFGEDGEKMSKSLGNFVLLRDLL------ 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIID 348
            +     V+R  +   HYR P+ +  Q L EA+  + +  + S          T++  +D
Sbjct: 289 -KEADPMVVRYLLGTVHYRRPLRYDDQALQEAQTNIKRLEEVSRRLDLRLADATTQANLD 347

Query: 349 P-----AVLS--------ALYNDLNTVSAIQALHKLARESTKN----------------- 378
                 AVL+        A+ +D N  + +  + +L +E  +                  
Sbjct: 348 TDEANLAVLAQLEADFIQAMDDDFNAANGMTVIFELVKEINRYLQSEVVSEKVLSKMQEI 407

Query: 379 -HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
             DLL IF      L  E  ++ L++     I+ L+ ER +  K K F  AD IR QL+ 
Sbjct: 408 FKDLLAIFG-----LVFETKEDLLDQE----IQALIDERNVARKAKDFGRADEIRDQLKE 458

Query: 438 KGFILED 444
           +G  L+D
Sbjct: 459 QGIYLDD 465


>gi|167563301|ref|ZP_02356217.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167570473|ref|ZP_02363347.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 465

 Score =  295 bits (756), Expect = 8e-78,   Method: Compositional matrix adjust.
 Identities = 166/393 (42%), Positives = 230/393 (58%), Gaps = 32/393 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ HIG+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +TS+ T     D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIRSLTSRFTDAMNADFDALGVERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATEFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P EP    W+S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEEPVGASWDSKYGLGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
             ++ A V+R  ++ THYR P++++   L +A   L++   T+      D A L      
Sbjct: 288 --NFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRL-YTALKDATPDSAPLDWNEAH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD 380
                +A+ +D NT  A+  L +LA E  +  D
Sbjct: 345 ARRFAAAMNDDFNTPVAVAVLFELATEVNRTRD 377


>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 485

 Score =  295 bits (756), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 152/328 (46%), Positives = 194/328 (59%), Gaps = 17/328 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF   + + + MYVCG T YD  HIG+AR  +VFDVLYR LR+   + 
Sbjct: 1   MRLYNTLARKKQEFVPENGNAVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN TDIDDKII RA +      +    + I  +   +F  D  RL  L    +P+
Sbjct: 60  -VTFIRNFTDIDDKIINRANE------VGKEAAAIAEQFIGEFYVDMDRLGVLRADVEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+MI L   +I   HAY   + ++ F   S   YG  S R IDE + G R+    
Sbjct: 113 CTEHIPEMIALTARLIGQDHAYATPSGDVYFRVRSFAGYGKLSGRNIDELESGARIDPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG GRPGWH+ECSAMS  Y     DIHGGG DL FP
Sbjct: 173 EKQDPLDFALWKAAKPGEPSWESPWGPGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+HNGF+ +   KMSKS GNF TI ++L+        + 
Sbjct: 233 HHENEIAQSEAATG-KPFANFWVHNGFVQINSEKMSKSLGNFFTIRDILD-------KFL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE 331
              +R  +L  HYR P+DF+   L EAE
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFDALEEAE 312


>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 490

 Score =  295 bits (756), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 186/510 (36%), Positives = 263/510 (51%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  ++ EF  ++P  + +Y CG TVYD +H+G+ R +IVFDVL R L Y  G +
Sbjct: 3   LRLYNTLTGRVEEFVPLNPPQVLIYTCGVTVYDDSHVGHGRSLIVFDVLRRYLEYL-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII +AR+E            + ++    + +D   +       +PR
Sbjct: 62  -VKFVRNFTDVDDKIINKAREECTHF------MTVANRYIASYYRDMEAIGVRPADVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I LIQ +I  G+AY +  ++ F   + P YG  SRR  +E + G RV     
Sbjct: 115 VTEHIQEIIQLIQGLIDKGYAYVSGGDVYFSVKAFPEYGKLSRRNPEELEAGARVEPSEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   EP W+SPWG GRPGWH EC AM   +LG   DIHGGGLDL+FPH
Sbjct: 175 KRDPLDFALWKAAKAGEPAWDSPWGPGRPGWHTECVAMIFKHLGTTIDIHGGGLDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+         A  W+HNG + + G+KMSKS GN++T+ E+          +  
Sbjct: 235 HENEIAQAEALTG-RPFARYWVHNGLVTVGGQKMSKSLGNYVTLREVYS-------RYHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRL--------------TEAEILLSKWPQTSTSKG--IID 348
            V+RL +LMTHYR P+DF+  ++              T+AE LL + P     +   ++D
Sbjct: 287 DVLRLLVLMTHYRSPLDFSWDKMEETKRSYERLKNAITDAE-LLKELPSEEVREKHPLLD 345

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLA------------RESTKNHDLLPIFNASA- 389
                     + L +D NT SA+  L  L             R   K  +L     AS  
Sbjct: 346 KIRDAEEKFFADLADDFNTPSALGRLFTLVSEMGKLKKEVLERRRVKTSELDAYQQASET 405

Query: 390 ---HILGIEVCKEHLNKNISI--AIEK------LVQERLILL---------KMKKFSSAD 429
              H+ GI    E L    S+   +EK      ++ ERLI L         + K ++ AD
Sbjct: 406 LLKHLRGIFGLFEDLYPVCSVRRVVEKEMEAGHVLDERLIELLIEVRSKARQEKAYAIAD 465

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR +L   G ILED   P      T+WK+
Sbjct: 466 LIRDRLRELGIILED--TPAG----TKWKR 489


>gi|329116688|ref|ZP_08245405.1| cysteine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907093|gb|EGE54007.1| cysteine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 447

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 169/468 (36%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+++ R + +F  I  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDSMTRSLRDFYPIKENQVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A Q   + P   A   I +     F++DT +L     +  PR
Sbjct: 61  -VNYISNFTDVDDKIINAAAQAKMT-PKELADKFIAA-----FMEDTAQLGIKPASQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ Q+I  +  +I  G AY++  ++ F      NYG  + + +++ ++G       E
Sbjct: 114 VMDYMDQIIDFVAALIEKGFAYQSEGDVYFRVDKSSNYGKLANKTLEDLEIGASGRTDTE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDLKENPLDFALWKSAKVGEISWESPWGAGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVD----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------AV 351
               V+R  +    YR+PI+FT + + +AE+ L     T +     D           A 
Sbjct: 288 --GQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTQSQPLTGDASAEELQSYVTAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D N  + I  +   A+     H    +   F +   + GI   ++ LN +    
Sbjct: 346 TDAMDDDFNAANGITVVFDFAKWINSGHYTEAVKAAFESMLDVFGIIFQEDVLNAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ +R      + F+ AD IR QL ++G  L D K   +G R TR
Sbjct: 402 IEALIADRQAARASRDFAKADAIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|222152459|ref|YP_002561634.1| cysteinyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113270|emb|CAR40797.1| cysteinyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 446

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 174/468 (37%), Positives = 254/468 (54%), Gaps = 40/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R++ +F+ I+ + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRQLRDFKPINDNQVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII +A  E+   P   A   I +     F++DT++L     T  PR
Sbjct: 60  QVNYISNFTDVDDKII-KAAAENGVTPKELADRFIAA-----FMEDTSKLGIKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  I  ++  G AY+   ++ F  +   NY   + + + + ++G       E
Sbjct: 114 VMDYMDEIIAFISVLMEKGFAYQVAGDVYFRVAKSENYARLANKTLADLEVGASGRTDSE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDLKENPLDFALWKSAKSGEISWESPWGPGRPGWHIECSVMATELLGHTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A      AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGHTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTVD----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS----KGIIDPAV 351
               V+R  +    YR+PI+FT + + +AE+ L       + P   TS    K  I+ A 
Sbjct: 288 --GQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTYRLPVAETSDLGYKTYIE-AF 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I  +   A+     H   ++   F     + GI   +E L+ +    
Sbjct: 345 KAAMDDDFNAANGITVVFDFAKWINSGHYSAEIKTAFEEMLAVFGIVFEEEVLDAD---- 400

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ ER      + F+ AD IR QL S+G  L D K   +G R TR
Sbjct: 401 IEALIAERQEARAQRDFAKADQIRDQLASQGIKLLDTK---DGVRWTR 445


>gi|326562651|gb|EGE12953.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 483

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 164/390 (42%), Positives = 227/390 (58%), Gaps = 33/390 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++Y+TL      F+ I    I +YVCG TVYD+ H+G+AR M+ FDV+ R LR   
Sbjct: 8   QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII+RA          + I+ +T +      +D   L C +P  
Sbjct: 68  YQ--VNYVRNITDIDDKIIQRAYDN------GETITELTDRFITAMHQDEQFLGCQSPNI 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           +PRAT HI  M +LI  ++    AY+ +  ++ +     PNYG  S+R +D+ + G   R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG+ FDIHGGG 
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI E+++  KF 
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVD--KFH 296

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIID------- 348
             +     IR  +L +HYR P++F+   L E+   LS+  Q+  S    G+I        
Sbjct: 297 PET-----IRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARE 374
                A   A+ +D NT  A+  L  +  E
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTE 381


>gi|300691854|ref|YP_003752849.1| cysteine tRNA synthetase (cysteine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
 gi|299078914|emb|CBJ51575.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
          Length = 465

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 179/469 (38%), Positives = 259/469 (55%), Gaps = 43/469 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T++      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTNRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L+     
Sbjct: 234 DLQFPHHENEIAQAEGANG-NTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVLKV---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA- 350
              +   V+R  +L +HYR  ++++   L +A   L++        P  + ++   +   
Sbjct: 289 ---YDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEADARPDWNEPH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH--LNK 403
                 A+ +D NT  A+ AL +LA E   T++  L     A A ++G+     H  L  
Sbjct: 346 GKRFREAMNDDFNTPVAMAALFELASEVNKTRSPALASQLVALAGVMGLLGRDPHAFLQG 405

Query: 404 NISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  A        +E  ++ R      + F+ AD IR  L + G +LED
Sbjct: 406 GVGAAADGLDAAEVEARIEARRAAKAARDFARADSIRADLLAAGIVLED 454


>gi|51894254|ref|YP_076945.1| cysteinyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|61216176|sp|Q67JP9|SYC_SYMTH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51857943|dbj|BAD42101.1| cysteinyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 471

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 175/476 (36%), Positives = 249/476 (52%), Gaps = 53/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYN L RK  +F  ++P  +R Y CGPTVYD+ HIGNAR  +VFD + R L Y   + 
Sbjct: 3   IRIYNDLTRKKEDFVPLEPGKVRFYNCGPTVYDYFHIGNARNFVVFDTVRRYLEYRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDD++I+RAR+   ++      S +  +  Q +  D   L        PR
Sbjct: 62  -VTFVQNFTDIDDRMIKRARERGITV------SELAEEMIQAYFADAGALGVRPADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPE 181
           AT  I + I +IQ +I  GHAY     ++ F  ++ P+YG  S + ++E   G   RV  
Sbjct: 115 ATALIDEQIAMIQQLIDKGHAYVVEGGDVYFRVTTSPDYGKLSHKNLEELVAGASERVDP 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK   P EP W +PWG GRPGWHIECSAM+  YLG   DIH GG DL 
Sbjct: 175 DDRKEHPFDFALWKGQKPGEPAWPAPWGPGRPGWHIECSAMARKYLGDTIDIHAGGEDLT 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS      +  A  W+HN  L ++G KMSKS GNF T+ ++L  K++ G  
Sbjct: 235 FPHHENEIAQSEAVTG-KPFARYWMHNAHLMIDGAKMSKSVGNFFTVRDIL--KRYDGE- 290

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------DP 349
               V+R+ +L  HYR  + F+ Q + +    L +   T  +   +            + 
Sbjct: 291 ----VVRMFLLSAHYRTQLSFSDQLMEDTRRALERLYNTVANLEHLAKTAPRAEMTAEEQ 346

Query: 350 AVL-----------SALYNDLNTVSAIQALHKLARE----------STKNHDLLPIFNAS 388
           AVL           +A+ +D NT   +  +  L+RE          +      L +    
Sbjct: 347 AVLAELSQARERFVAAMDDDFNTAEGLAVIFDLSRELNSRVKPGASAAFAEGGLALLREL 406

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+ + ++   + +   IE L+  R    K + F+ AD IR QL + G ILED
Sbjct: 407 AGVLGL-LERKAQPQELDAEIEALIAARQEARKARNFAEADRIRDQLRAMGIILED 461


>gi|182437812|ref|YP_001825531.1| cysteinyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|229558792|sp|B1VS94|SYC_STRGG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|178466328|dbj|BAG20848.1| putative cysteinyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 466

 Score =  295 bits (755), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 166/471 (35%), Positives = 253/471 (53%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++++T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIIAKSAEQGRPWWSIG-------YENERAFNDGYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HIP+MI +++ +I  GHAYEA+  + FD  S+P Y + S +++D+ +  +   E  
Sbjct: 114 RATGHIPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLTLSNQELDDLRQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIFP
Sbjct: 173 GKRDQRDFAMWKATKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      ++ A  W+HNG++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQATAYG--DEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KHWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--------GIIDPAVL 352
             V+R  +   HYR  I+++ + L EAE   ++   + Q  T K          + PA  
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKTGEVVPPADEVPPAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH--- 400
            A+  DL    A+  +H   R+                L    A   +LG++    H   
Sbjct: 344 EAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAADRLAEVRAMLGVLGLDPLDPHWAG 403

Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  L+  +   +  ++ +R      K +++AD IR QL   G ++ED
Sbjct: 404 EGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIED 454


>gi|332141401|ref|YP_004427139.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551423|gb|AEA98141.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 460

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 171/480 (35%), Positives = 257/480 (53%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  R+  +F  +    + +YVCG TVYD +H+G+AR  + FDVL R LR+   + 
Sbjct: 2   LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        ++   +T++      +D   +  L P  +P 
Sbjct: 61  -VKYVRNITDIDDKIIARANEN------GESFEALTARTIAMMHEDFAAINLLEPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + H+ ++I +IQ ++  G+AY+A + +++FD S   +YG  S++ +D+ K G RV    
Sbjct: 114 VSGHMDEIIEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 GKDDPLDFVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N+W+H G + +   KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCA-YDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVL-------KEHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R  ++  HYR  + ++   +T+A+  L +             T  S G       +
Sbjct: 286 SETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVVVNESTDLSYGGYLARFEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGI-------EVCKE 399
           A+ +DLN   A   L  +ARE  +  D       L  +      ILG+        +   
Sbjct: 346 AMNDDLNVPEAFSVLFDVARELNRQKDNAEEAGKLAAVLKGLGAILGMLQSDPDTYLKGG 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N + +  IE L+++R      K +++AD  R  L +KG +LED      G   T W++
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLED------GPSGTTWRK 459


>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 482

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 175/500 (35%), Positives = 250/500 (50%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++  G
Sbjct: 2   REITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHV-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYV+N TD+DDKII  +  E        A  +I ++    + +    L        
Sbjct: 61  YK-VTYVQNFTDVDDKIINTSNGE------GVAWDVIANRYIDSYFEVMDALGVERADVY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP ++ +I+ +I  G+AYE + ++ F      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+ FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---- 350
               +R  +L THYR P+DF+ +RL EA   L +                G  D A    
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAGPCDDAQRLL 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLA------------RESTKNHDLLP----IF 385
                      +A+ +D NT  A  ++  LA            RE     D +     IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRIF 406

Query: 386 NASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                ++G+       N     A     ++ ++  R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED  +P       RWK++
Sbjct: 467 TIED--SPTG----ARWKKR 480


>gi|81429293|ref|YP_396294.1| cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|109894906|sp|Q38UZ6|SYC_LACSS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78610936|emb|CAI55988.1| Cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 468

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 166/473 (35%), Positives = 250/473 (52%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ ++   ++MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 2   LTVYNTLTRQKETFKPLEEGRVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A  E+ ++P       +  +    F +DT  L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKMIKAANAENITVPE------LADRYITAFKEDTKALNIEPATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
           AT++I +++  IQ++I   +AY  + ++ +       YG  + + +D+ + G    T   
Sbjct: 114 ATDNIEEIVAFIQDLIAKDYAYAVDGDVYYRARKFKAYGHLAGQDLDQLEQGASEHTATE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK     E  WESPWG+GRPGWHIECS MS+ YLG   DIHGGG DL
Sbjct: 174 ETLRKEDPIDFALWKAEKGNEIAWESPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +   N W+HNGF+ +  + +KMSKS GNF+T+++L++     
Sbjct: 234 EFPHHENEIAQS-EAKTGQTFVNYWLHNGFVTVGDDDQKMSKSLGNFVTVHDLIQEVN-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------- 349
                   +R  M  T YR PI ++   L EA+  L +   T  +     P         
Sbjct: 291 -----PQALRFLMSSTQYRRPIRYSQSLLAEAQTNLDRLKTTLDNLAFRQPTAEPGEDQI 345

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHI 391
                     A ++A+ +D N  + +  L++LA+ S         ++  L  +      +
Sbjct: 346 VMDKAAELEAAFVTAMDDDFNVQNGLTQLYELAKLSNQYLEQPTVQSDTLTSLATRLTRL 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L I       ++ +   +E L++ER      K F+ +D IR QL+++G ILED
Sbjct: 406 LAIFGVVFKADQLLDTEVESLIEERQAARAAKDFAKSDAIRDQLKAQGIILED 458


>gi|329906071|ref|ZP_08274354.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547346|gb|EGF32177.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 464

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 185/488 (37%), Positives = 261/488 (53%), Gaps = 61/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  +     RMYVCG T+YD+ HIG+ R M+ FDV+YR L+      
Sbjct: 4   LKIYNTLAREKQLFTPMVAGEARMYVCGMTIYDYCHIGHGRMMMAFDVVYRWLQV--SGY 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   SI      S +T +       DT  L  L PTH PR
Sbjct: 62  SVTYVRNITDIDDKIIRRAVENKESI------SSLTERFIDAMAYDTAALGILPPTHAPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ +I  +   G AY+ ++ ++ +     P YG  S + +D+ + G RV    
Sbjct: 116 ATRYVPQMLNMITRLQEKGLAYQGDDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 176 GKRDPLDFVLWKAAKDSEPEDAKWASPWGHGRPGWHIECSAMACALLGEQFDIHGGGTDL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A+  +  AN W+HNG + ++  KMSKS  NF  I ++L        
Sbjct: 236 QFPHHENEIAQSEGAND-KPFANYWLHNGHVRIDNEKMSKSLDNFFLIRDVLA------- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPA------ 350
            + A V+R  +L  HYR P++++   L +A + L++        + S+  +D A      
Sbjct: 288 KYDAEVLRFFILRAHYRSPLNYSDTHLDDARVALTRLYTALKDVAPSEEELDWASPYPQR 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------------LL---PI-FNASAHI 391
              A+ +D NT  A+  L  LA E  ++ D               LL   P+ F   AH 
Sbjct: 348 FAEAMDDDFNTPLALAVLFDLATEINRSGDPALAAQLRALAAVLGLLERSPLEFLQGAH- 406

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            G     E      +  I + +  R+     + +++AD +R +L + G +LED   P N 
Sbjct: 407 -GTVASDED-----NALIAEKIAARIAAKIARDYATADRLRDELLAAGILLED--KPGN- 457

Query: 452 QRMTRWKQ 459
             +T W++
Sbjct: 458 --ITEWRR 463


>gi|299143767|ref|ZP_07036847.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518252|gb|EFI41991.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 465

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 176/486 (36%), Positives = 256/486 (52%), Gaps = 53/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ +    + MY CGPTVY++ H+GNARP+ VFD L R   + Y   
Sbjct: 1   MRLYNTLTRKKEEFKPLKDGLVTMYNCGPTVYNYIHVGNARPLTVFDTLRRY--FIYKGL 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDK+I +A  E  ++      + +  +  ++F  D   L      T  P
Sbjct: 59  DVKFVVNFTDIDDKLINKANAEGITV------AEVAERYIKEFKVDANGLHLYDYETLNP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI Q+I  IQ +I    AY +  ++ FD +S  +YG  S +K+++   G RV    
Sbjct: 113 RATEHINQIIDFIQILIDKNAAYVSEGDVYFDINSAKDYGKLSHKKLEDLISGARVDVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNPADF LWK     EP W +PWG GRPGWHIECS M+   LG+  DIH GG DL FP
Sbjct: 173 IKKNPADFALWKAKKEGEPYWTAPWGEGRPGWHIECSVMAKTLLGETIDIHSGGEDLQFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   + +   A  W+HNG + ++  KMSKS GNF T+ E+ E        + 
Sbjct: 233 HHENEIAQSETCNGV-PFAKFWLHNGMITVDNEKMSKSKGNFFTVREVSE-------EFN 284

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSK--------- 344
             V+R  +L  HYR PI+F+          ++R+  A+  L ++ +    +         
Sbjct: 285 LEVLRFFLLGCHYRSPINFSREIMEQTKNGLERIYNAKYKLEEFLENCIDREFSDEDKKQ 344

Query: 345 -GIIDPAVL---SALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILG 393
            GII   +     ++ +D+NT  AI A++ + +       E +    +  I+N    +  
Sbjct: 345 LGIIADEIKFFEESMEDDINTADAITAIYNIVKFINIELNEDSNKKLVDEIYNTLLRLSK 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +    E   +NI   +E+L++ER    K K F  AD IR  L SK  ++ED +       
Sbjct: 405 VLGILELERENIDEEVERLIKEREDARKNKDFKRADEIRDILASKNILIEDTRTG----- 459

Query: 454 MTRWKQ 459
            T+WK+
Sbjct: 460 -TKWKR 464


>gi|269124972|ref|YP_003298342.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268309930|gb|ACY96304.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 465

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 169/470 (35%), Positives = 249/470 (52%), Gaps = 47/470 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +Y+T  R +  F+ +    + MYVCG T     HIG+ R  +++DVL R LR+   E
Sbjct: 2   SLHLYDTGTRTVRPFKPLHEGRVGMYVCGATPQAEPHIGHLRSGVIYDVLLRWLRHSGYE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TD+DDKII  A +    +P       +   N + F +    L CL PT +P
Sbjct: 62  --VTFVRNVTDVDDKIIAAAAER--GVPW----FALAEANQRIFTRGYELLGCLPPTVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-IPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT H+P+MI LI+ ++  GHAY A  ++ FD +S   +YG  S ++++  +     P +
Sbjct: 114 RATGHVPEMIVLIRRLLEAGHAYTAAGDVYFDVNSWAEHYGELSHQRLEHMRPAGDTPNE 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WE+PWG GRPGWH+ECS MS+ YLG  FDIHGGG+DLIF
Sbjct: 174 DAKRDPRDFALWKGAKPGEPSWETPWGEGRPGWHLECSVMSTKYLGPTFDIHGGGVDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS  A   +  A  W+HNG L ++G KMSKS GN + + +LLE  +      
Sbjct: 234 PHHENERAQSQAAG--DGFARYWLHNGLLTVDGVKMSKSIGNVVLLTDLLEKAR------ 285

Query: 303 PAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----GIIDPAV------ 351
             PV +R  +   HYR  +D+T   L EA     +     T      G  +PA       
Sbjct: 286 --PVEVRYYLASAHYRSLMDYTDGSLAEAVTAYQRIEGFVTRAAELVGAGEPAAELPEAF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGI----------EVCK 398
            +A+ +DL    A+  LH+  R+      + D   +    A + G+          E   
Sbjct: 344 TAAMNDDLGVPQALAVLHETVRDGNSALASGDRAEVARRLASVRGMMGVLGLDPLAEPWA 403

Query: 399 EHLNKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILED 444
           +    ++   ++ LV    ++R      K +++AD IR  L + G ++ED
Sbjct: 404 DDRGSDLRPVVDALVKVALEQRQAARARKDYAAADEIRDSLAAAGIVVED 453


>gi|302336403|ref|YP_003801610.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320243|gb|ADK68730.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 493

 Score =  295 bits (754), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 177/495 (35%), Positives = 245/495 (49%), Gaps = 73/495 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+   +  E + ++  +IRMYVCGPTVYD  HIGNAR  + FDV+ R L Y   +  V
Sbjct: 3   VYNSQTHRKEELRPLEEGHIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLTYKGYQ--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+ +N+TD+DDKII RA  E  S       + +  + +  F+    R   L P  +PRAT
Sbjct: 61  TFAQNLTDVDDKIINRANDEGRSA------TEVAEEFSCAFIDQMRRFNILDPDIRPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             +  M  +I+ +I  GHAY A N ++ F   S  +YGS S R +D+ + G RV     K
Sbjct: 115 REVEAMRQMIETLIEKGHAYVAGNGDVYFSVRSDHDYGSLSGRDLDQLRAGERVEVNEDK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP W SPWG GRPGWH EC AM  HYLG   DIHGGG DL+FPHH
Sbjct: 175 RDPFDFALWKAAKPGEPSWPSPWGEGRPGWHTECCAMIHHYLGTPIDIHGGGQDLVFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENE AQ+ CA      ANIW+H G L + G KMSKS GNF+T+ ++L+        +PA 
Sbjct: 235 ENECAQALCA-WGAPLANIWMHAGMLRVNGDKMSKSLGNFLTLEDVLD-------DYPAG 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KW-----PQTS-------TSK 344
            +RL ML THYR  +DF   +L  A   L          +W     PQ         +  
Sbjct: 287 AVRLLMLQTHYRSALDFQTDQLEGAVGTLERLRTCVKNLRWAAENAPQDGELCDADRSLG 346

Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLA-------RESTKNHDLLPIFNAS------ 388
             +D      +  + +D NT   + A+  L         E        P+  A+      
Sbjct: 347 AAVDATHAEFVRQMDDDFNTSGGLAAIFSLVTSANTYLAERAGVVATAPVLRAADMLVEL 406

Query: 389 AHILGIEVCKEHLNKNISI-------------------AIEKLVQERLILLKMKKFSSAD 429
           + ++GI++ +    + + I                   A   L+  R      K +  AD
Sbjct: 407 SAVMGIDLVRGSGGEELPIELVDLARRHAGFEGHLADEAARALIDAREAARAAKDWGVAD 466

Query: 430 YIRKQLESKGFILED 444
            IR  +   G +LED
Sbjct: 467 AIRDGIAGLGLVLED 481


>gi|227501071|ref|ZP_03931120.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216844|gb|EEI82242.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 471

 Score =  295 bits (754), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 181/478 (37%), Positives = 259/478 (54%), Gaps = 55/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ID + I+MYVCGPTVYD+ HIGNARP++VFD L R + +   + 
Sbjct: 1   MKIHNTLTRQKEEFIPIDENKIKMYVCGPTVYDYMHIGNARPLVVFDTLRRYMNFRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V YV N TD+DDKII ++  E  S         +T K    +++D   L      T  P
Sbjct: 60  -VKYVVNFTDVDDKIINKSIAEGISTKE------VTDKYIAAYMEDAKDLNIDEENTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
           RAT  +  +I  ++ +I  G AYE+  ++ FD S   +YG  S + I++   G       
Sbjct: 113 RATEVMDDIIAFVKGLIDKGMAYESEGDVYFDVSKADDYGKLSGKNIEDLIHGASNRLDR 172

Query: 180 PEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +   KK+P DF LWK++    E  W+SPWG GRPGWHIECS MS   LG   DIH GG 
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWKSPWGDGRPGWHIECSTMSKKILGDTIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS   +  +K AN W+HNG + ++G KMSKS GNF T++++       
Sbjct: 233 DLEFPHHENEIAQSEGLNG-KKFANYWMHNGMIQVDGSKMSKSLGNFFTLHDI------- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLS--KWPQTSTSKGI 346
            + +   VIR  +L T+YR+PI+FT          +QRLT A   L   K  Q   S+ I
Sbjct: 285 KKEYDLSVIRFWLLTTNYRQPINFTKEIINQANSSLQRLTNAYFRLEDLKKSQAEKSQTI 344

Query: 347 IDPAV----------LSALYNDLNTVSAIQALHKLAR------ESTKNHDLL----PIFN 386
               +          +  + +DLNT  AI  L  +A+      +   + DL+     ++ 
Sbjct: 345 NQDLIRELDSFKNKFIEVMDDDLNTADAITVLFDIAKFINTKIDENSDKDLVNKTFDLYK 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +    LG+   K+  N +++  IE+L+ +R    K K F++AD IR +L   G  ++D
Sbjct: 405 SLFDTLGLLAKKKEDNVDVA-KIEELIAKRSEAKKAKDFATADAIRDELSHMGITIKD 461


>gi|312865434|ref|ZP_07725661.1| cysteine--tRNA ligase [Streptococcus downei F0415]
 gi|311098952|gb|EFQ57169.1| cysteine--tRNA ligase [Streptococcus downei F0415]
          Length = 447

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/468 (37%), Positives = 253/468 (54%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLHEGQVNMYVCGPTVYNYIHIGNARSSVAFDTIRRYFEY--AGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++   S P + A   I +     F++DT  L     T  PR
Sbjct: 60  QVNYISNFTDVDDKIIKAAKEADMS-PKDLAAKFIAA-----FMEDTKALGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             + + Q+I  +Q ++  G AYEA  ++ F      NY + + + + + ++G       E
Sbjct: 114 VMDFMDQIIDFVQVLMDKGFAYEAGGDVYFRVQKSHNYAALANKTLADLEVGASGRTDSE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TELKEDPLDFALWKSAKLGEISWDSPWGAGRPGWHIECSVMSTTILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNF+T+++LL+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDPAVL-- 352
               V+R  +   HYR+PI+FT + + +A+  L     T T        +  +D  +   
Sbjct: 287 -DGQVLRFFLATQHYRKPINFTDKAIHDAKANLKYLKNTYTLPLDEQSDQADLDKFLADF 345

Query: 353 -SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIA 408
            +A+ +D N  + I  +  LA+     H    I +A A +L   GI   +E L+      
Sbjct: 346 KTAMDDDFNAANGITVIFDLAKWINSGHYNQAIKDAFAKMLEVFGIVFQEESLDSE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+++R      K F++AD IR  L ++G  L D K   +G R TR
Sbjct: 402 IEALIKKRQAARAAKDFATADKIRDDLAAQGIKLLDTK---DGVRWTR 446


>gi|283852945|ref|ZP_06370204.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571635|gb|EFC19636.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 485

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 252/491 (51%), Gaps = 67/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT+ R    F +  P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   E 
Sbjct: 1   MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII++A  E  +       + I  +    F +D  RL  L    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKKANSEGATS------AEIAERYIAAFYEDMDRLGILRADAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I +M  +   +I +GHAY   + ++ F   S   YG  S R +++ + G RV    
Sbjct: 113 ATEYIAEMADMAARLIENGHAYRTPSGDVYFRVRSFDGYGKLSGRDVEDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP W+SP+G GRPGWH+ECS MS   LG   DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +     W+HNGF+ +   KMSKS GNF+TI  + E      R  P
Sbjct: 233 HHENEIAQSEAATGSD-FCRFWVHNGFVRINTEKMSKSLGNFVTIRTIYE------RYLP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----------------ILLSKWPQTSTSKGI- 346
             V+R  ++ +HYR P+D++ Q L EAE                +  +KW +T     I 
Sbjct: 286 -EVLRFFLVSSHYRSPLDYSDQALDEAEKGIKRIYAAKGQMEQALTRAKWSETKLPPEIG 344

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                ++     A+ +DLNT  AI  +  L R + +  D                +L   
Sbjct: 345 QELNKLEEGFTGAMDDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAAEALGRILADL 404

Query: 386 NASAHILGI----------EVCKEHLNK-NISIA-IEKLVQERLILLKMKKFSSADYIRK 433
           +  + ILG+          E+    L +  I  A ++ LV ER    K K F+ +D IR 
Sbjct: 405 DTWSGILGVFGRDSREFLAELKASRLARLGIDAARVDGLVAERQEARKTKDFARSDAIRD 464

Query: 434 QLESKGFILED 444
           +L   G  + D
Sbjct: 465 ELAGLGVTVMD 475


>gi|315640330|ref|ZP_07895447.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483992|gb|EFU74471.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 468

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 258/493 (52%), Gaps = 63/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL RK   FQ I+   ++MYVCGPTVY++ HIGN R  + FD + R   Y   + 
Sbjct: 2   IQIYNTLTRKKEVFQPIEEGKVKMYVCGPTVYNYIHIGNGRSTVSFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII      H +   N+    + ++    F +DT  L        PR
Sbjct: 61  -VTYVSNFTDVDDKII------HAAKEANETALEVANRFIAAFYEDTEALHVKKADINPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +HIP +I  I  +I  G+AYEA  ++ + T     YG  S + IDE ++G       E
Sbjct: 114 VMDHIPDIIDFISVLINKGYAYEAQGDVYYRTRKFTKYGQLSDQSIDELEIGASQRTGQE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W SPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQIKEDPLDFALWKAAKADEISWSSPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A+  +  AN W+HNG++ +  + +KMSKS GNF+T++EL+       
Sbjct: 234 FPHHENEIAQS-EANTGKPFANYWMHNGYVTIGEDDQKMSKSLGNFVTVHELV------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------STS 343
           +     V+R  +  T YR PI ++   L EA   L +   T                S +
Sbjct: 286 KEVDPKVLRFFLATTQYRRPIRYSQTTLKEAATNLQRLKNTVDNVVFRQEKAVAQLASDA 345

Query: 344 KGIIDPAVLSALY-----NDLNTVSAIQALHKLAR-------ESTKNHDLLP----IFNA 387
             + D A L   +     +D N  + I   ++LA+       +S  +  +L        +
Sbjct: 346 DKLTDLAKLEEQFITEMDDDFNAANGITVTYELAKWLNIYLEQSDVSQAVLAQGLSQLTS 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GIE   E ++ +    IE+L+++R    K + F+ +D IR QL+ +G +LED   
Sbjct: 406 WLEIFGIEFTNELVDAD----IEQLIEQRNQARKDRDFARSDEIRDQLKEQGIVLEDTAQ 461

Query: 448 PDNGQRMTRWKQK 460
                  TRW+++
Sbjct: 462 G------TRWRRE 468


>gi|294630050|ref|ZP_06708610.1| cysteinyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292833383|gb|EFF91732.1| cysteinyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 466

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 163/470 (34%), Positives = 250/470 (53%), Gaps = 48/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   +   E 
Sbjct: 3   IRLYDTSARQIRDFTPLKPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFSHRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKII +A ++H           I  +N + F    T L CL P+++PR
Sbjct: 62  -VTFIRNVTDIDDKIITKAHEQH------RPWWSIGYENERAFNDGYTALGCLPPSYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+M+ +++ +I  GHAY A+  + FD  S P Y   SR+++D     +   E   
Sbjct: 115 ATGHVPEMVEMMRRLIERGHAYAADGNVYFDVRSFPGYLELSRQELDNLLQPSGEGET-G 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP W +PWG GRPGWH+ECSAM+  YLG  FDIHGGGLDLIFPH
Sbjct: 174 KRDPRDFAMWKAAKPGEPTWPTPWGEGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W  
Sbjct: 234 HENEIAQAKAYG--DEFARYWVHNAWVTMAGDKMSKSLGNSVLVSEMV-------KQWRP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGI-------IDPAVLSA 354
            V+R  +   HYR  I+++ + L EAE   ++   + Q    K         + PA   A
Sbjct: 285 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFIQRVVEKAGPVEPSAEVPPAFAEA 344

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH----- 400
           + +DL    A+  +H   R+                L    A   +LG++   E      
Sbjct: 345 MDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEQWAGEG 404

Query: 401 ------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 L+  +   +  ++ +R      K +++AD IR QL   G ++ED
Sbjct: 405 GDRGEDLHGVVDTLVRMVLDQREAARARKDWTTADAIRDQLGQSGLVIED 454


>gi|268318912|ref|YP_003292568.1| hypothetical protein FI9785_418 [Lactobacillus johnsonii FI9785]
 gi|262397287|emb|CAX66301.1| cysS [Lactobacillus johnsonii FI9785]
          Length = 470

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 173/480 (36%), Positives = 258/480 (53%), Gaps = 60/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 1   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        +  +  + F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARKEHTTV------EKLAERYIKAFMEDTEALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 113 ATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------QTSTS 343
             +     V+R  M    YR PI+++   L +AE +L ++               +T   
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETILKRYQNTLRNLDARLNDENETLED 344

Query: 344 KGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------PI 384
            G+ D         + A+ +D N  +A+  ++ LA  +T N+ L               +
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLA--TTLNNHLQKDQVDKPALKRAKKL 402

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             A   I G+   +E    +    IEKL+ +R    K K ++ +D +R +L++KG ++ED
Sbjct: 403 LIAWLEIFGVSFKEEQAGNDDE--IEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIED 460


>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 482

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/500 (35%), Positives = 250/500 (50%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++  G
Sbjct: 2   REITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHV-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYV+N TD+DDKII  +  E        A  +I ++    + +    L        
Sbjct: 61  YK-VTYVQNFTDVDDKIINTSNGE------GVAWDVIANRYIDSYFEVMDALGVERADVY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP ++ +I+ +I  G+AYE + ++ F      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+ FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---- 350
               +R  +L THYR P+DF+ +RL EA   L +                G  D A    
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAGPCDDAQRLL 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLA------------RESTKNHDLLP----IF 385
                      +A+ +D NT  A  ++  LA            RE     D +     IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRIF 406

Query: 386 NASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                ++G+       N     A     ++ ++  R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED  +P       RWK++
Sbjct: 467 TIED--SPAG----ARWKKR 480


>gi|167467942|ref|ZP_02332646.1| cysteinyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 336

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 149/327 (45%), Positives = 204/327 (62%), Gaps = 17/327 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLAY-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA 330
           A  +R  ++  HYR  ++++ + L +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQA 312


>gi|15617084|ref|NP_240297.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682391|ref|YP_002468775.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|11134971|sp|P57558|SYC_BUCAI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765184|sp|B8D815|SYC_BUCAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|25293242|pir||G84986 cysteine-tRNA ligase (EC 6.1.1.16) [imported] - Buchnera sp.
           (strain APS)
 gi|10039149|dbj|BAB13183.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219622124|gb|ACL30280.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086211|gb|ADP66293.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086789|gb|ADP66870.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087376|gb|ADP67456.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087872|gb|ADP67951.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 464

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 178/466 (38%), Positives = 252/466 (54%), Gaps = 42/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL      F  I  + + +YVCG TVYDF HIG+ R  +VFD++ R LR+   + 
Sbjct: 2   LKIFNTLTSTKEIFTPIKKNRVNLYVCGVTVYDFCHIGHGRTFVVFDMIVRYLRFSGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII ++ +E   I      +  T+   ++  KD   L    P  +PR
Sbjct: 61  -VKYVRNITDIDDKIISKSTKEKKKI------NTFTASMIKEMHKDFDLLGISVPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T++I  +I +I  +I   HAY   N ++IF   S PNYG+ SR+ +   + G+R+P   
Sbjct: 114 VTDYIDNIIRIITTLIKKKHAYIHKNGDVIFSIDSDPNYGTLSRQSLTSLESGSRIPLNN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DFILWK S   E  W+SPWG+GRPGWHIECSA+++ +     DIHGGG DL+FP
Sbjct: 174 MKKNPLDFILWKSSNKEEYSWDSPWGKGRPGWHIECSAITNVFFNNSIDIHGGGSDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE +QS C +  +   N W+H G + L  +KMSKS GN   +  +L       +   
Sbjct: 234 HHENERSQSICFNN-KSMINFWMHTGMVILNNKKMSKSLGNVYFLRNIL-------KDCD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWPQTSTSKGI-IDPAVLSA 354
           A V+R   L THYR PI +  + L +A          L    P  +  +G+  +    +A
Sbjct: 286 AEVLRYFFLSTHYRHPIYYCEKNLDQAYTSLKYLYTALYDTNPFFNNEEGLNFELEFYNA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILG--IEVCKEHLNKN 404
           + +D NT +      K+AR+    KN D+L            A+ LG   +  KE L K 
Sbjct: 346 MNDDFNTPAVFSIFFKIARKINFLKNKDILKTNKFAFRLKYLANNLGFLFQDPKEFLQKK 405

Query: 405 ISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ++       I+ L+++R I  + K +  AD IRK+L S   ILED
Sbjct: 406 TTLNLLTLKEIQLLIEKRNIARQSKLWQEADNIRKKLMSLDIILED 451


>gi|312964405|ref|ZP_07778699.1| cysteinyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|110614083|gb|ABF02750.1| cysteine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|312290882|gb|EFR18758.1| cysteinyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|320196999|gb|EFW71618.1| Cysteinyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 437

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 180/459 (39%), Positives = 257/459 (55%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K + YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK-LKYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY 
Sbjct: 58  -----GESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYV 112

Query: 148 ANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+N +++FD  + P YG  SR+ +D+ + G RV     K+NP DF+LWK S   EP W S
Sbjct: 113 ADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCA-HDGQYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + 
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284

Query: 327 LTEAEILLSK-WPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLAREST- 376
           L +A   L + +     +   + PA         + A+ +D NT  A   L  +ARE   
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 377 -KNHDLLPIFNASAH------ILG-IEVCKEHLNKNISIA-------IEKLVQERLILLK 421
            K  D+      ++H      +LG +E   E   ++ + A       IE L+Q+RL   K
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K +++AD  R +L   G +LED      G + T W++K
Sbjct: 405 AKDWAAADAARDRLNEMGIVLED------GPQGTTWRRK 437


>gi|16077162|ref|NP_387975.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307906|ref|ZP_03589753.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312227|ref|ZP_03594032.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317161|ref|ZP_03598455.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321424|ref|ZP_03602718.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|549024|sp|Q06752|SYC_BACSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|289284|gb|AAA21798.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
 gi|467482|dbj|BAA05328.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
 gi|499303|emb|CAA52167.1| cysteine--tRNA ligase [Bacillus subtilis subsp. subtilis str. 168]
 gi|2632361|emb|CAB11870.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 466

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 167/488 (34%), Positives = 257/488 (52%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   + 
Sbjct: 3   ITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I+ +  + + +D   L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------ISERFIKAYFEDVGALGCRKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
              ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+     
Sbjct: 115 VMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT A  W+HNG++N++  KMSKS GNF+ +++++       +   
Sbjct: 235 HENEIAQSEAL--TGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDP------ 349
             ++R  ML  HYR PI+++ + L   +   S+          + ++S  + +       
Sbjct: 286 PQLLRFFMLSVHYRHPINYSEELLENTKSAFSRLKTAYSNLQHRLNSSTNLTEDDDQWLE 345

Query: 350 -------AVLSALYNDLNTVSAIQALHKLAREST----KNHD-------LLPIFNASAHI 391
                  A    + +D NT +AI  L  LA+ +     K+H         + +F+    +
Sbjct: 346 KVEEHRKAFEEEMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVSV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED       
Sbjct: 406 LGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILED------T 456

Query: 452 QRMTRWKQ 459
            + TRWK+
Sbjct: 457 AQGTRWKR 464


>gi|332094204|gb|EGI99255.1| cysteinyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 437

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 180/459 (39%), Positives = 257/459 (55%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K + YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK-LKYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY 
Sbjct: 58  -----GESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIEEIIELTEQLIAKGHAYV 112

Query: 148 ANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+N +++FD  + P YG  SR+ +D+ + G RV     K+NP DF+LWK S   EP W S
Sbjct: 113 ADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCA-HDGQYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + 
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284

Query: 327 LTEAEILLSK-WPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLAREST- 376
           L +A   L + +     +   + PA         + A+ +D NT  A   L  +ARE   
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 377 -KNHDLLPIFNASAH------ILG-IEVCKEHLNKNISIA-------IEKLVQERLILLK 421
            K  D+      ++H      +LG +E   E   ++ + A       IE L+Q+RL   K
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K +++AD  R +L   G +LED      G + T W++K
Sbjct: 405 AKDWAAADAARDRLNEMGIVLED------GPQGTTWRRK 437


>gi|326317611|ref|YP_004235283.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374447|gb|ADX46716.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 459

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 167/391 (42%), Positives = 227/391 (58%), Gaps = 35/391 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + EF  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R LR   G +
Sbjct: 3   LRIYNTLSRAMEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSS-GLR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            VTYVRNITDIDDKII RA        +   I+I  +T + T    +D   LA   PT +
Sbjct: 62  -VTYVRNITDIDDKIIRRA--------VERGITIRQLTDEMTAAMHEDIGALAIEPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ LI  +   G AY A + ++ +       YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLSLIDTLERKGLAYRAGSGDVNYAVRRFEGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 173 QDDKQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI E+L+     
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVLQQVD-- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA 350
                A  +R  ++ THYR P++++   L +A   L +         P+   +    DP 
Sbjct: 290 -----AETLRFFIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGAIDWADPH 344

Query: 351 VL---SALYNDLNTVSAIQALHKLARESTKN 378
                +A+  D  T  A+  L +LA E  + 
Sbjct: 345 AARFKAAMDEDFGTPEAVAVLFELAGEVNRT 375


>gi|302380049|ref|ZP_07268526.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312122|gb|EFK94126.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 448

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 174/458 (37%), Positives = 246/458 (53%), Gaps = 51/458 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y    V +V N TDIDDKII
Sbjct: 3   IKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGYNVKFVSNFTDIDDKII 60

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQPRATNHIPQMIYLIQNI 139
            +A+ E      N     IT K  Q ++ + + L      T  P+AT +I +MI  ++ +
Sbjct: 61  NKAKDE------NIDFREITKKYIQAYLNNVSGLNFDEDDTIHPKATEYIDEMIKFVKTL 114

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK-RST 198
              G AY  +  + FD +   +YG  S++ ID+ + G R+     KKNP DF LWK R  
Sbjct: 115 EDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNSEKKNPMDFALWKKRKE 174

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS--CCAD 256
             EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL FPHHENEIAQS  C   
Sbjct: 175 ESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQFPHHENEIAQSETCTGA 234

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                AN W+HN  + ++  KMSKS  NF  + ++        + +   VIRL +L  HY
Sbjct: 235 HF---ANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEFDLEVIRLWLLSVHY 284

Query: 317 REPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS-------ALYNDL 359
           R PIDF          ++ RL  A+  L++  + S+ K   D  + +       A+ +D+
Sbjct: 285 RNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDNIKTFREKFEQAMDDDI 344

Query: 360 NTVSAIQALHKLARESTKNHD-------LLP---IFNASAHILGIEVCKEHLNKNISIAI 409
           NT  AI  L    +   KN+D       LL    + +  +++LGI + KE  + ++   I
Sbjct: 345 NTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLGI-LFKED-DDDLDSEI 402

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           E L+++R    K K F  AD IR +L S G +L+D ++
Sbjct: 403 EDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRD 440


>gi|239995443|ref|ZP_04715967.1| cysteinyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 460

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 170/480 (35%), Positives = 256/480 (53%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  R+  +F  +    + +YVCG TVYD +H+G+AR  + FDVL R +R+   + 
Sbjct: 2   LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        ++   +T++      +D   +  L P  +P 
Sbjct: 61  -VKYVRNITDIDDKIIARANEN------GESFEALTARTIAMMHEDFAAINLLEPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + H+ ++I +IQ ++  G+AY+A + +++FD S   +YG  S++ +D+ K G RV    
Sbjct: 114 VSGHMDEIIAIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 GKDDPLDFVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N+W+H G + +   KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCA-YDTPYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVL-------KEHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLS 353
           +  +R  ++  HYR  + ++   +T+A+  L +             T  S G       +
Sbjct: 286 SETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVEVDESTDLSYGGYLKRFEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHL----- 401
           A+ +DLN   A   L  +ARE  +  D       L  +      ILG+            
Sbjct: 346 AMNDDLNVPEAFSVLFDVARELNRQKDNADEAGKLAAVLKGLGAILGMLQSDPDTFLKGG 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N + +  IE L+++R      K +++AD  R  L +KG +LED      G   T W++
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLED------GPSGTTWRK 459


>gi|326778447|ref|ZP_08237712.1| cysteinyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658780|gb|EGE43626.1| cysteinyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 466

 Score =  294 bits (753), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 165/471 (35%), Positives = 253/471 (53%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++++T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIIAKSAEQGRPWWSIG-------YENERAFNDGYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HIP+MI +++ +I  GHAYEA+  + FD  S+P Y + S +++D+ +  +   E  
Sbjct: 114 RATGHIPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLTLSNQELDDLRQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DL+FP
Sbjct: 173 GKRDQRDFAMWKATKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      ++ A  W+HNG++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQATAYG--DEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KHWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--------GIIDPAVL 352
             V+R  +   HYR  I+++ + L EAE   ++   + Q  T K          + PA  
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKTGEVVPPADEVPPAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH--- 400
            A+  DL    A+  +H   R+                L    A   +LG++    H   
Sbjct: 344 EAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAADRLAEVRAMLGVLGLDPLDPHWAG 403

Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  L+  +   +  ++ +R      K +++AD IR QL   G ++ED
Sbjct: 404 EGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIED 454


>gi|229083409|ref|ZP_04215757.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699842|gb|EEL52479.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 440

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 172/464 (37%), Positives = 248/464 (53%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   E  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +P       I  +  + + +D T L C   T  PR T ++  +I  I+ ++  G+AYE
Sbjct: 59  EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ + T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---- 323
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+    
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 324 ------VQRLTEAEILLSKWPQTSTS------KGIID-----PAVLSALYNDLNTVSAIQ 366
                 ++R+  A   L    ++ST       K +++      A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLVEIEKFQLAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ LA  + +               +  F     ILG+E+ KE L   +   IE L+Q+
Sbjct: 345 ELYNLANHANQYLLEEHTSKVVIEAYVKQFETLFGILGLELTKEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILED------TAQGTRWKR 439


>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|109894893|sp|Q47XL5|SYC_COLP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 469

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 170/474 (35%), Positives = 247/474 (52%), Gaps = 50/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   F  I+   + +YVCG TVYD  HIG+ R  I FD + R LR+   + 
Sbjct: 2   LQIYNTLSRQKETFTPINAGKVGLYVCGCTVYDLCHIGHGRTYISFDNIARYLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD++DKII RA +       N+    +T +      +D   L    P  +PR
Sbjct: 61  -VNYVRNITDVEDKIINRANEN------NETTEALTERTIAAMHQDFDSLNMARPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN--------NEIIFDTSSIPNYGSFSRRKIDEQKMG 176
            T H+ ++I +I+ ++   HAY A          +++FD SS  +YG  S + +++ + G
Sbjct: 114 VTTHMNEIIAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQNLEQLQSG 173

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           +RV    +K NP DF+LWK + P EP W SPWG GRPGWHIECSAM++  LG  FDIHGG
Sbjct: 174 SRVEVDQNKNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L    
Sbjct: 234 GSDLTFPHHENEIAQSCCALNT-PYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLA--- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS--- 353
                + A  +R  +   HYR  ++++   LT+A   + +   +     I    V++   
Sbjct: 290 ----QYDAETVRFFLTTGHYRSQLNYSTDNLTQARASVERIYTSLRDVNIESDYVINKDS 345

Query: 354 --------ALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHILGI-- 394
                   A+ +D NT  A+  L ++++E              DL     A   I+G+  
Sbjct: 346 SFVKQFCQAMDDDFNTPQALAVLFEISKELNVAKAAANNALAIDLASTLVALGEIVGLLQ 405

Query: 395 ---EVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  N N  +A IE L+ +R      K ++ AD  R +L +   +LED
Sbjct: 406 LDPAAFLQGDNDNDEVAIIEALIVQRNQARIDKDWAMADDARDKLNAMNIVLED 459


>gi|225867828|ref|YP_002743776.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701104|emb|CAW97948.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 447

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 169/459 (36%), Positives = 242/459 (52%), Gaps = 36/459 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY--AGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++   S P   A   I +     F++DT  L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAKEAGLS-PKQLADQFIAA-----FMEDTKALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  I  +I  G+AYE+  ++ F  +   NY   + + I + + G       E
Sbjct: 114 VMDYMDEIIVFIAALIKKGYAYESAGDVYFRVAKAANYAKLANKTIADLEAGASGRTDTE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W SPW  GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEIAWASPWSSGRPGWHIECSVMATELLGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+N++  KMSKS GNF+T+++LL+T       
Sbjct: 234 FPHHTNEIAQS-EAKTGKSFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTVD----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKG----IIDPAV 351
                +R  +   HYR+PI+FT + + +A + L       + P  +T+          A 
Sbjct: 288 --GQTLRFFLATQHYRKPINFTEKAIHDAGVNLKYLKNTLQQPTVATADASQLNAFITAF 345

Query: 352 LSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D NT + I  L  +A+       +  +   F     + GI    E L+      
Sbjct: 346 KAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAESLDTE---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           IE+L+ ER      + F+ AD IR QL ++G  L D K+
Sbjct: 402 IEQLIAERQEARANRDFAKADAIRDQLAAQGIKLLDTKD 440


>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 481

 Score =  294 bits (752), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 175/502 (34%), Positives = 257/502 (51%), Gaps = 68/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--Y 60
           ++IK+YNTL+R+    + I+   +++YVCG T Y+  HIGNARP + +D++ R L Y  Y
Sbjct: 2   EEIKVYNTLKREKQILKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGY 61

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    V +++N TD+DDKII +A  E            ++++    + K    L      
Sbjct: 62  H----VDFIQNFTDVDDKIINKANAEKSDW------KTVSTRYIDAYFKVMDALHIRRAD 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             P  + H+  +I +++ +I  GHAY   N++ +D S+  +Y   S RK+++   G RV 
Sbjct: 112 IYPYVSKHMGDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVM 171

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF LWK + P EP WESPWG GRPGWHIECS MS+HYLG  FD HGGG DL
Sbjct: 172 VNTAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDL 231

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +K    W+HNGF+ +   KMSKS  NF  + ++LE  K+ G 
Sbjct: 232 IFPHHENEIAQSEGATG-QKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLE--KYSGD 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------QTSTSK 344
           +     +R  +L THYR P+DF+ +RL EAE  +SK                  +T+ S 
Sbjct: 289 A-----LRYFLLSTHYRSPLDFSDERLEEAEKNMSKLKDVIARIKEMEKEDGKVETNESV 343

Query: 345 GIIDPAVLS------ALYNDLNTVSAIQALHKLARESTKNHDLL---------------P 383
            +   A  +      A+ +D NT  A   L    ++    ++ +                
Sbjct: 344 SLKKAAARTIEEFRQAMNDDFNTGLATGVLFDFVKDINIYYNAVNSGVAIDKEAVIEAKE 403

Query: 384 IFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            F     ILGI      + + H   +    +E ++  R I  K K++  AD IR +L   
Sbjct: 404 TFKTILDILGILENEWNIQESHAGSDYDALMEMILSVREIARKEKQYKLADEIRDKLAEL 463

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G  +ED           RWK++
Sbjct: 464 GITVEDSATG------ARWKKR 479


>gi|296268495|ref|YP_003651127.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091282|gb|ADG87234.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 464

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 174/488 (35%), Positives = 265/488 (54%), Gaps = 63/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           + +Y+T  R + EF  I+P  + +Y+CG TV    HIG+ R  + FDVL R L+R  Y  
Sbjct: 3   LHLYDTSTRTVREFVPINPGRVSIYLCGATVQAPPHIGHIRCGVAFDVLRRWLMRLGYD- 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+ RN+TD+DDKII+ A +E   +P      ++  +N + F     +L CL PT +P
Sbjct: 62  --VTFCRNVTDLDDKIIKVAAEE--GVPW----FVVAERNQRLFTWAYDQLGCLPPTVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           RA  HIP+MI LI+ ++  GHAY A N++ FD  S  + YG  S ++++  +       +
Sbjct: 114 RAMGHIPEMIELIKRLLDKGHAYVAGNDVYFDVRSFADRYGRLSNQRLEHMRPAGDTENE 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W +PWGRGRPGWH+ECSAM++ YLG+ FDIHGGG+DLIF
Sbjct: 174 SLKRDPRDFALWKGAKPGEPSWPTPWGRGRPGWHLECSAMATKYLGETFDIHGGGVDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNG L + G KMSKS GN + I+E+L   +      
Sbjct: 234 PHHENEIAQSQAAG--DGFARYWVHNGLLKVGGEKMSKSLGNSLLISEILRKVR------ 285

Query: 303 PAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAV 351
             P+ +R  ++  HYR  +D++           +R+       ++      +   +    
Sbjct: 286 --PIELRYYLVAAHYRSELDYSEEALKEAAAAFRRIEGFVNRAAEMIHDVDAAAPLPQPF 343

Query: 352 LSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAH----ILGIE------- 395
           + A+ +DLN   A+  +H++ RE     S  N + +    A       +LG++       
Sbjct: 344 VDAMNDDLNVPQALAVVHEVVREGNIAISQVNKEQVARLLAETQNMLDVLGLDPRAEPWR 403

Query: 396 -----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +E ++  +SIA+E+    R      K +++AD IR +L + G ++ED   P  
Sbjct: 404 SRNGSAMREVVDALVSIALEQRQAAR----ARKDYATADAIRDRLAAAGIVVED--TPQG 457

Query: 451 GQRMTRWK 458
               TRW+
Sbjct: 458 ----TRWE 461


>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 476

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/487 (35%), Positives = 247/487 (50%), Gaps = 60/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    ++MYVCGPTVYD  H G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKPLTEKEVKMYVCGPTVYDHTHFGHGRTYVSFDIIRRYLEHI--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQE--HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V  V N TDIDDKII+RA ++  +P       I++        F+ D   L        
Sbjct: 60  TVNLVINFTDIDDKIIKRANEKGKNPQELSEQFINV--------FLNDMATLKVKPADIY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T HIP++I  I+ +I  G AY+  N + F+     NYG  S   +++   G R+   
Sbjct: 112 PKVTEHIPEIIAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLYSGVRIETS 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESP+G GRPGWHIECSAMSS YLGK FDIHGGG DL F
Sbjct: 172 EKKKNPEDFALWKTAKPREPKWESPFGEGRPGWHIECSAMSSKYLGKQFDIHGGGRDLSF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI ++        + +
Sbjct: 232 PHHENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEDI-------SKEY 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDPAV 351
              ++R   +  HYR PID+T + +T  +  L K             ++  S    +   
Sbjct: 284 DPEILRFFFIQRHYRSPIDYTAESMTHVKNNLEKIYNVIENIRISLEKSKKSGAWGENEF 343

Query: 352 L-------------SALYNDLNTVSAIQALHKLARESTKNHDLLP------------IFN 386
           L              A+ +D NTV A++++ +++    K   L+              F 
Sbjct: 344 LLYDILKNSKHNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVETPSEGLLLKAFDFFK 403

Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               I G+     K     N    I+ L++ R  L   K +  +D IR  L++ G+++ED
Sbjct: 404 IVGEIFGLFENYFKTSSESNDEEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNIGYLIED 463

Query: 445 YKNPDNG 451
             NP  G
Sbjct: 464 --NPKEG 468


>gi|150402240|ref|YP_001329534.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166200151|sp|A6VG07|SYC_METM7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150033270|gb|ABR65383.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 476

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 175/485 (36%), Positives = 248/485 (51%), Gaps = 56/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ ++ + ++MYVCGPTVYD  H+G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKPLNENEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHI--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+R+ QE    P   + + +       F+ D   L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRS-QEKGKNPKELSETFVNV-----FLNDMATLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I  I+ +I  G AY+  N + F+     NYG  S   +++   G R+     
Sbjct: 114 VTEHIPEIIAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLISGARIEPSDE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK + P EP WESP+G GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNPEDFALWKTAKPGEPKWESPFGEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNFITI ++        + +  
Sbjct: 234 HENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFITIEDI-------SKEYDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDP----- 349
            ++R   +  HYR PID+T + ++  +  L K            + S   GI +      
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESMSHVKNNLEKIYNVIENIRISLEKSEKSGIWNENEFLL 345

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------IFNAS 388
                        A+ +D NTV A++++ +++    K   L+              F   
Sbjct: 346 YDILKNSKHNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVKTPSEGLLLKAFDFFKIV 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     KE    N    ++ L++ R  L   K +  +D IR  L+  G+ +ED  
Sbjct: 406 GEIFGLFENYFKESSESNDEGFVKFLIELRSDLRLQKNYEMSDKIRDGLKELGYQIED-- 463

Query: 447 NPDNG 451
           NP  G
Sbjct: 464 NPKEG 468


>gi|332523431|ref|ZP_08399683.1| cysteine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314695|gb|EGJ27680.1| cysteine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 447

 Score =  294 bits (752), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 169/468 (36%), Positives = 252/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + I MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLKENQISMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +   S P       +  K  + F+ DT +L     +  PR
Sbjct: 60  NVNYISNFTDVDDKIIKAAAESGIS-P-----KALADKFIEAFMADTKQLGIKPASQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV-PE 181
             +++ ++I  +Q +I  G AYE+  ++ F  +   NY   + + + + ++G   R+  E
Sbjct: 114 VMDYMGEIIAFVQELIQKGFAYESAGDVYFRVTKSENYARLANKTLADLEVGASGRIDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P E  W+SPW +GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 ATLKEDPLDFALWKSAKPGEIFWDSPWSKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   ++ AN W+HNGF+N++  KMSKS GNF+T++++LE       S
Sbjct: 234 FPHHTNEIAQS-EAKTGQRFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLE-------S 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID--PAV 351
               V+R  +    YR+PI+FT + + +AE+ L     T        S +  + D   + 
Sbjct: 286 VDGQVLRFFLATQQYRKPINFTEKAIRDAEVNLKYLKNTYLLPLKTVSDTNRLFDFKKSF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D N  + I  +   A+     H    +   F     + GI V +E +   I   
Sbjct: 346 KEAMDDDFNAANGITVIFDFAKWINSGHYDQTIKTAFGEMLEVFGI-VFQEEV---IDSE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +E L+ +R      + F+ AD IR QL ++G  L D K   +G R TR
Sbjct: 402 VEALIAQRQTARAARDFAKADSIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|257058375|ref|YP_003136263.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588541|gb|ACU99427.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 484

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 172/487 (35%), Positives = 260/487 (53%), Gaps = 63/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+    + ++   IRMY CG TVYD+ H+G+AR  +V+DV+ R L++   E 
Sbjct: 3   LTVYNTLTRRKEPLETLETGKIRMYCCGITVYDYCHLGHARTCMVWDVVRRYLQWRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RARQE  ++        ++ +  + + +D  RL        PR
Sbjct: 62  -VQYIQNFTDIDDKILNRARQEGTTM------EAVSDRFIEAYFEDMERLHVQKADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  L+  +   G+AY++N ++ +      +YG  S RK+++ + G   RV   
Sbjct: 115 ATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRKLEDLQAGASGRVEVQ 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KK+P DF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DPEAAKKKDPFDFAVWKAAKPGEPSWDSPWGQGRPGWHIECSAMVRERLGETIDIHVGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   +  A  W+HNG + +EG KMSKS GNFITI +LL+     
Sbjct: 235 DLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVEGEKMSKSLGNFITIRDLLDKVD-- 291

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------------------EILLSKWPQ 339
                   +RL +L  HYR+P+DFT + L  A                   ++  +  P 
Sbjct: 292 -----PMAMRLFILQAHYRKPVDFTDEALEAATNGWHTLKEGLLFGYNHGKQLNFTASPP 346

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
              +   +      A+ +D N    +  L ++A+E  K  ++L                 
Sbjct: 347 HPLTSSPLTQRFQQAVDDDFNFAGGLAILFEIAKELRKEGNILVHQGHTETSPQVLEEQW 406

Query: 383 PIFNASAHILGIEV----CKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLES 437
                 A +LG+E      +E +   +S A IE+L+++R I  + K ++  D +R +L++
Sbjct: 407 RTLVELAGVLGLETDISEVQEEVGNGLSDAEIEELIEQRKIARQNKNYAEGDRLRDELKN 466

Query: 438 KGFILED 444
           +G IL D
Sbjct: 467 QGIILVD 473


>gi|307326970|ref|ZP_07606160.1| cysteinyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306887268|gb|EFN18264.1| cysteinyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 465

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 167/473 (35%), Positives = 252/473 (53%), Gaps = 55/473 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   +   + 
Sbjct: 3   IRLYDTSARQIRDFTPLRPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAHRGYD- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q+ P   I         +N + F +    L CL  T++P
Sbjct: 62  -VTFIRNVTDIDDKIIAKSAEQKRPWWAIG-------YENERAFNQAYDILGCLPVTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
           RAT H+P+MI +++ +I  GHAY A   + FD  S P Y   S + +D    G R P   
Sbjct: 114 RATGHVPEMIEMMRELIDRGHAYAAEGNVYFDVRSFPEYLKLSNQDLD----GLRQPSGE 169

Query: 182 -KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DL
Sbjct: 170 GEIGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGRAFDIHGGGVDL 229

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ+      +  A  W HN ++ + G KMSKS GN + ++E++       +
Sbjct: 230 IFPHHENEIAQAKAFG--DDFAAYWAHNAWVTMSGEKMSKSLGNSVLVSEMV-------K 280

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPA 350
            W   V+R  +   HYR  I+++ + L EAE   ++             T      + PA
Sbjct: 281 RWRPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVMEKAGTVEPAAEVPPA 340

Query: 351 VLSALYNDLNTVSAIQALHKLARE--STKNHD-------LLPIFNASAHILGIEVCKEH- 400
              A+ +DL    A+  +H   R+  S    D        L    A   +LG++   EH 
Sbjct: 341 FAEAMDDDLGVPQALAVVHTTVRQGNSALTADDKEAAVARLAEVRAMLGVLGLDPLDEHW 400

Query: 401 ---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    L+  +   +  ++++R      K +++AD IR QL+  G ++ED
Sbjct: 401 AGGSDRGEDLHGVVDSLVRLVLEQRQAARTRKDYATADAIRDQLQQSGLVIED 453


>gi|297158396|gb|ADI08108.1| cysteinyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 466

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 166/473 (35%), Positives = 252/473 (53%), Gaps = 54/473 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFNPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFSYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKII ++ ++      N     I  +N + F      L CL  T++PR
Sbjct: 62  -VTFIRNVTDIDDKIIAKSAEQ------NRPWWAIGYENERAFNSAYDVLGCLPVTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
           AT H+P+MI +++ +I  GHAY A   + FD  S P Y   S +++D    G R P    
Sbjct: 115 ATGHVPEMIEMMRGLIERGHAYAAEGSVYFDVRSYPGYLQLSNQELD----GLRQPSGEG 170

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +Y K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLI
Sbjct: 171 EYGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGVDLI 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+      +  A  W HN ++ + G KMSKS GN + ++E++       + 
Sbjct: 231 FPHHENEIAQAKAFG--DDFATYWTHNAWVTMSGEKMSKSLGNSVLVSEMV-------KH 281

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKG--------IIDPA 350
           W   V+R  +   HYR  I+++ + L EAE   ++   + Q  T K          + PA
Sbjct: 282 WRPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRVTEKAGKVVPPAPEVPPA 341

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH- 400
              A+ +D     A+  +H   R+                L    A   +LG++   EH 
Sbjct: 342 FAEAMDDDFGVPQALAVVHTTVRQGNSALTADDKESAVARLAEVRAMLGVLGLDPLDEHW 401

Query: 401 ---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    L+  +   +  ++++R      K +++AD IR QL+  G ++ED
Sbjct: 402 AGGPDRGEDLHGVVDSLVRLVLEQRQAARTRKDYATADAIRDQLQQSGLVIED 454


>gi|257067131|ref|YP_003153387.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256799011|gb|ACV29666.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 472

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 182/480 (37%), Positives = 260/480 (54%), Gaps = 58/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+ + IRMYVCGPTVYD+ HIGNARP++VFD   R +++   + 
Sbjct: 1   MKIHNTLTRQKEEFIPIEENKIRMYVCGPTVYDYMHIGNARPLVVFDTFRRYMQFKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V YV N TD+DDKII +      SI        +T K    +++D   L      T  P
Sbjct: 60  -VKYVVNFTDVDDKIINK------SIAEGITTKEVTDKYIAAYMEDAKDLNIDEDDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
           RAT  +  +I  ++ ++  G AYE+  ++ FD S   +YG  S + I++   G       
Sbjct: 113 RATEVMDDIISFVKGLVDKGMAYESEGDVYFDVSKADDYGKLSGKNIEDLIHGASNRLDT 172

Query: 180 PEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +   KK+P DF LWK++    E  W+SPWG GRPGWHIECS MS   LG+  DIH GG 
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWKSPWGEGRPGWHIECSTMSKKILGETIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHHENEIAQS   +  EKT AN W+HNG + ++G KMSKS GNF T++++      
Sbjct: 233 DLEFPHHENEIAQSEGLN--EKTFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------ 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA----EILLSKWPQTSTS 343
             + +   +IR  +L T+YR+PI+FT          +QRLT A    E LL K      S
Sbjct: 285 -KKEYDLSIIRFWLLTTNYRQPINFTREIIEQAKASLQRLTNAYFRLEELLDKAEDKDLS 343

Query: 344 KGIID---------PAVLSALYNDLNTVSAIQALHKLAR------ESTKNHDLLP----I 384
           +   D            +  + +DLNT  AI  L  +A+      +S+ + DL+     +
Sbjct: 344 EEEKDLENNLKDFKDKFIEVMDDDLNTADAITVLFDIAKFVNTKLDSSSSKDLVDKTYKL 403

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +      LG+   K+  + +    IE+L+ +R    K K F++AD IR +L S G  ++D
Sbjct: 404 YKELFESLGLLAKKKEADVD-EEKIEELIAKRSEAKKAKDFATADKIRDELSSMGITIKD 462


>gi|91784175|ref|YP_559381.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358667|sp|Q13X60|SYC_BURXL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91688129|gb|ABE31329.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 465

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 179/470 (38%), Positives = 257/470 (54%), Gaps = 45/470 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL-- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +  +   +D   L    P  +
Sbjct: 60  GYNVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIKALHEDADALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A++ ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIERLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPQEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  +   HYR P++++   + +A   L++   T+      D A L      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALTRL-YTALKDVTPDGAELDWNEAY 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIE------- 395
                +A+ +D NT  A+  L +LA E  +  D      L +  A   +LG E       
Sbjct: 345 AQRFQAAMNDDFNTPVAVSVLFELASEVNRTRDPALARQLRLLGAVIGLLGREPRAYLQQ 404

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 +    + AIE  +  R    + K F++AD IR +L   G  LED
Sbjct: 405 AAGAAAVGALEAAAIEAKIAARAAAKQAKDFAAADRIRSELLEAGVALED 454


>gi|332796177|ref|YP_004457677.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332693912|gb|AEE93379.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 467

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 180/480 (37%), Positives = 262/480 (54%), Gaps = 58/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL RK  +F  ++   ++MYVCGPTVYD+ HIG+ R  + +D + R LR      
Sbjct: 2   IRVFNTLGRKFEDFSTVENGIVKMYVCGPTVYDYVHIGHGRTFVAYDAIVRYLRL--KGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  ++NITDIDDKII RA++   S         I    ++ ++++ + L      H PR
Sbjct: 60  NVIRIQNITDIDDKIINRAKETGKSW------EEIVDYYSKDYLENLSLLKVKIDLH-PR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K D+   G    ++ 
Sbjct: 113 VTQHIKEIINFVQGLIDKGHAYVAPSGSVYFDVDTYPHYGELSNTKKDQWNQGEEFVKE- 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG+DLIFP
Sbjct: 172 -KRHPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGEQFDIHGGGMDLIFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+      +     W+H  FLN+ G KMSKS GN IT+ + L  KK+G     
Sbjct: 231 HHENERAQTESLTG-KPWVRYWMHVAFLNIRGEKMSKSLGNIITLKDAL--KKYG----- 282

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILL-----------SKWPQTST 342
           A V+R   L +HYR PIDF+          +QRL +A  +L           SK      
Sbjct: 283 ADVLRYWYLSSHYRSPIDFSEENLEQSKVSLQRLKDALAVLKDILKEGPKSYSKDEDIKV 342

Query: 343 SKGIIDP--AVLSALYNDLNTVSAIQALHKLAR------ESTKNH-------DLLPIFNA 387
            + II        A+ ND +T +A++ +H++A       ++T++        D   IFN 
Sbjct: 343 QREIIQKIKEFDEAMSNDFDTATALKKIHEIANIVFSKLQNTRDFLAASIALDGFRIFNE 402

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              ++  E+   +  + I   I+ +++ R +L + K +  +D IR  LES G  + D K+
Sbjct: 403 VFGVMDEEMGLAY--ERIYEVIDGIIEVRNLLRQKKMYDLSDQIRSILESHGIKVLDSKD 460


>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
 gi|212673441|gb|EEB33924.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
          Length = 483

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 165/384 (42%), Positives = 215/384 (55%), Gaps = 41/384 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF  + P  + MYVCG T YD+ HIG+AR  +VFDVL R LR    + 
Sbjct: 1   MQLYNTLTRKKEEFVPVRPGKVNMYVCGITAYDYCHIGHARSALVFDVLVRHLRALGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA +E            +       F +D  RL  +   H+PR
Sbjct: 60  -VTFVRNFTDVDDKIIRRANEEKRDW------REVGQTYIDAFHEDMDRLNVVRADHEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I QM  L   +I  G AY   + ++ F   + P YG  S R +DE + G RV    
Sbjct: 113 ATEYIQQMQDLCSELIAQGKAYAVPSGDVYFRVRAYPPYGKLSGRSLDELQAGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YL    DIHGGG DLIFP
Sbjct: 173 EKQDPLDFALWKAAKPGEPFWESPWGKGRPGWHIECSAMSKEYL--PLDIHGGGQDLIFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +  A  W+HNGF+ +   KMSKS GNF TI ++L        S+ 
Sbjct: 231 HHENEIAQTEAACSCQ-LARFWVHNGFVQVNAEKMSKSLGNFKTIRDILA-------SYL 282

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVL- 352
              +R  +L  HYR PIDFT          +QR+ E ++   K  + +  K +  PA + 
Sbjct: 283 PETLRFFLLGKHYRSPIDFTADIMDESEKALQRIYECQLEAGKALERAKWKKVDLPADIL 342

Query: 353 -----------SALYNDLNTVSAI 365
                      +AL +D+NT  A+
Sbjct: 343 KEWDEHGQGFNAALDDDVNTAQAL 366


>gi|228950638|ref|ZP_04112772.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228808989|gb|EEM55474.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 440

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 171/464 (36%), Positives = 245/464 (52%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +P       I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 59  EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWP--------QTSTSKGIID-------------PAVLSALYNDLNTVSAIQ 366
                 L +          +  +S  + D              A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTK----NHDLLPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +     H    +  A          ILG+E+ KE L   +   IE+L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELSKEEL---LDKEIEELIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILED------TAQGTRWKR 439


>gi|172035425|ref|YP_001801926.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171696879|gb|ACB49860.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 482

 Score =  293 bits (751), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 178/485 (36%), Positives = 257/485 (52%), Gaps = 61/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R    F  I+   ++MY CG TVYD+ H+G+AR  IV+DV+ R L++   + 
Sbjct: 3   LTVYNTLTRNKEPFTTIEEGKVKMYCCGITVYDYCHLGHARTCIVWDVVRRYLQWRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY++N TDIDDKI+ RARQE  ++        ++ +  + + +D   L        PR
Sbjct: 62  -VTYIQNFTDIDDKILNRARQEKTTM------EAVSERFIEAYFEDMECLNVAKADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-- 180
           AT+ +  +  L+  +   G+AY +  ++ ++      YG  S RK+++ + G   RV   
Sbjct: 115 ATHTLNGIQRLVSELEAKGYAYASEGDVYYNVHQFKPYGKLSGRKLEDLQAGASGRVAVE 174

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   KK+PADF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DAEASKKKDPADFAVWKSAKPGEPAWDSPWGKGRPGWHIECSAMVRERLGETIDIHVGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELLE     
Sbjct: 235 DLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVGGEKMSKSLGNFTTIRELLE----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLSKWPQTS-----TSKG 345
              +    +RL +L  HYR+P+DFT + L        T +E LL  + Q S      ++ 
Sbjct: 289 --KFDPMAVRLFILQAHYRKPVDFTDEALEAATKGWQTLSEGLLFGFQQGSKLGFKENRS 346

Query: 346 IIDPAVL----SALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PI 384
            + P  +      + +D N    +  L ++A+E  K  +LL                   
Sbjct: 347 ELLPEFIQRFQDTVDDDFNFAGGLAVLFEIAKELRKEGNLLVHQGKTETPSELLQKQWQT 406

Query: 385 FNASAHILGIEVCKEHLNKNIS-----IAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             A A +LG+E     +N   S      AIE  +++R    K K F+ +D IR +L+ +G
Sbjct: 407 LIALATVLGLEADSNPVNSEKSDGLDDAAIEAFIEKRKEARKNKNFAESDRIRDELKEQG 466

Query: 440 FILED 444
            IL D
Sbjct: 467 VILVD 471


>gi|227894572|ref|ZP_04012377.1| cys-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227863731|gb|EEJ71152.1| cys-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 477

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 182/493 (36%), Positives = 264/493 (53%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 4   VKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYK-GYK 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINEIINFVKVLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
             +     V+R  M    YR  I+++ + L +A  +L ++  T T+              
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNIDYRLDDNTASEKS 347

Query: 344 ----KGI--IDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----N 386
               K I   D   ++A+ +D N  +A+ A++ L       A     + D L  F     
Sbjct: 348 SELVKAIEDTDQKFIAAMDDDFNVQNALTAVYDLLSVVNANANSKKADKDALKQFEEKLT 407

Query: 387 ASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           A   I G++   +C ++   N    IE LV++R      K ++++D +R QL+  G  ++
Sbjct: 408 AWLLIFGVDTNKLCAQNTGSN-DDEIEALVKKRDEARANKDWATSDQLRDQLKEMGITIQ 466

Query: 444 DYKNPDNGQRMTR 456
           D   P  G R TR
Sbjct: 467 D--TP-QGTRWTR 476


>gi|42518493|ref|NP_964423.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|61216256|sp|Q74L26|SYC_LACJO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|41582778|gb|AAS08389.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 470

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 173/480 (36%), Positives = 258/480 (53%), Gaps = 60/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 1   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        +  +  + F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARKEHTTV------EKLAERYIKAFMEDTEALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 113 ATHEIKEIIDFVQDLIDKGVAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------QTSTS 343
             +     V+R  M    YR PI+++   L +AE +L ++               +T   
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETLED 344

Query: 344 KGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------PI 384
            G+ D         + A+ +D N  +A+  ++ LA  +T N+ L               +
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLA--TTLNNHLQKDQVDKPALKRAKKL 402

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             A   I G+   +E    +    IEKL+ +R    K K ++ +D +R +L++KG ++ED
Sbjct: 403 LIAWLEIFGVSFKEEQAENDDE--IEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIED 460


>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 484

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 178/492 (36%), Positives = 258/492 (52%), Gaps = 71/492 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  +F  ++   +RMYVCG TV ++AHIG+ R  + +DV+ R L Y   E 
Sbjct: 2   LRVYNTLSRKKEKFTPLETGKVRMYVCGLTVQNYAHIGHIRSAVNYDVIRRYLEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDI++KI+ RAR+E    P+      +  K T+ +++D  ++         R
Sbjct: 61  -VTYVQNFTDINEKIVARAREEGLR-PLE-----LADKYTKAYLEDIEKMKIKRADVYCR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+ I ++I +++ ++  G+AYE N  + F      +YG  S R ++E + G RV     
Sbjct: 114 ATDTIKEIIKMVKKLLDKGYAYEVNGNVYFSVEKFSDYGKLSGRNLEEMQAGARVEVNEE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++   E  W+SPWG+G PGWHIECSAMS  YLGK  DIHGGG DLIFPH
Sbjct: 174 KRHPMDFALWKKAPAGEISWDSPWGKGWPGWHIECSAMSIKYLGKRIDIHGGGTDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     W+HNG +NL+G KMSKS GNF T+ E+L       + +  
Sbjct: 234 HENEIAQSESCTGEKPFVKYWLHNGSVNLKGEKMSKSLGNFFTVREIL-------KEFKP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGII----------- 347
             +R  +L  HYR PIDF  + +  A     K   T         KG+I           
Sbjct: 287 DEVRYFLLTKHYRSPIDFNFEEVEAARKSWRKLVNTYQVMVQILEKGVITKNKITENTKG 346

Query: 348 DPAVLS-----------ALYNDLNTVSAIQALHKLARE------------STKNHDLLP- 383
           +  ++S           A+ +D NT  A   +H+LARE            + +   +L  
Sbjct: 347 ENTIISILNKKEKEFEEAMDDDFNTARATGVMHELAREINTFVNSPEFELNGETSKVLKK 406

Query: 384 ---IFNASAHILGI--------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
              +F+  + ILG+        EV  E LN  +   +E   + R    + K +  AD IR
Sbjct: 407 AQNLFDRFSDILGLDLAFSSSDEVDNEILNNLVDFILEIRDEAR----QEKNWQLADRIR 462

Query: 433 KQLESKGFILED 444
             LE  GF ++D
Sbjct: 463 DGLEDLGFEIKD 474


>gi|219681836|ref|YP_002468222.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471540|ref|ZP_05635539.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254765183|sp|B8D9R3|SYC_BUCA5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219624679|gb|ACL30834.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 464

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 177/466 (37%), Positives = 252/466 (54%), Gaps = 42/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL      F  I  + + +YVCG TVYDF HIG+ R  +VFD++ R LR+   + 
Sbjct: 2   LKIFNTLTSTKEIFTPIKKNRVNLYVCGVTVYDFCHIGHGRTFVVFDMIVRYLRFSGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII ++ +E   I      +  T+   ++  KD   L    P  +PR
Sbjct: 61  -VKYVRNITDIDDKIISKSTKEKKKI------NTFTASMIKEMHKDFDLLGISVPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T++I  +I +I  +I   HAY   N ++IF   S PNYG+ SR+ +   + G+R+P   
Sbjct: 114 VTDYIDNIIRIITTLIKKKHAYIHKNGDVIFSIDSDPNYGTLSRQSLTSLESGSRIPLNN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DFILWK S   E  W+SPWG+GRPGWHIEC+A+++ +     DIHGGG DL+FP
Sbjct: 174 MKKNPLDFILWKSSNKEEYSWDSPWGKGRPGWHIECTAITNVFFNNSIDIHGGGSDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE +QS C +  +   N W+H G + L  +KMSKS GN   +  +L       +   
Sbjct: 234 HHENERSQSICFNN-KSMINFWMHTGMVILNNKKMSKSLGNVYFLRNIL-------KDCD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWPQTSTSKGI-IDPAVLSA 354
           A V+R   L THYR PI +  + L +A          L    P  +  +G+  +    +A
Sbjct: 286 AEVLRYFFLSTHYRHPIYYCEKNLDQAYTSLKYLYTALYDTNPFFNNEEGLNFELEFYNA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILG--IEVCKEHLNKN 404
           + +D NT +      K+AR+    KN D+L            A+ LG   +  KE L K 
Sbjct: 346 MNDDFNTPAVFSIFFKIARKINFLKNKDILKTNKFAFRLKYLANNLGFLFQDPKEFLQKK 405

Query: 405 ISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ++       I+ L+++R I  + K +  AD IRK+L S   ILED
Sbjct: 406 TTLNLLTLKEIQLLIEKRNIARQSKLWQEADNIRKKLMSLDIILED 451


>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 481

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 175/502 (34%), Positives = 257/502 (51%), Gaps = 68/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--Y 60
           ++IK+YNTL+R+   F+ I+   +++YVCG T Y+  HIGNARP + +D++ R L Y  Y
Sbjct: 2   EEIKVYNTLKREKQIFKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGY 61

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    V +++N TD+DDKII +A  E            ++++    + K    L      
Sbjct: 62  H----VDFIQNFTDVDDKIINKANAEKSDW------KTVSTRYIDAYFKVMDALHIRRAD 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             P  + H+  +I +++ +I  GHAY   N++ +D S+  +Y   S RK+++   G RV 
Sbjct: 112 IYPYVSKHMEDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVM 171

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF LWK + P EP WESPWG GRPGWHIECS MS+HYLG  FD HGGG DL
Sbjct: 172 VNTAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDL 231

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +K    W+HNGF+ +   KMSKS  NF  + ++LE  K+ G 
Sbjct: 232 IFPHHENEIAQSEGATG-QKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLE--KYSGD 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------QTSTSK 344
           +     +R  +L THYR P+DF+ +RL EAE  +SK                  +T+ S 
Sbjct: 289 A-----LRYFLLSTHYRSPLDFSDERLEEAEKNMSKLKDVIARIKEMEKEDGKVETNESV 343

Query: 345 GIIDPAVLS------ALYNDLNTVSAIQALHKLARESTKNHDLL---------------P 383
            +   A  +      A+ +D NT  A   L    ++    ++ +                
Sbjct: 344 SLKKAAARTIEEFRQAMNDDFNTGLATGVLFDFVKDINIYYNAVNSGVAIEKEAVIEAKE 403

Query: 384 IFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            F     ILGI        + +   +    +E ++  R    K K++  AD IR +L   
Sbjct: 404 TFKTILDILGILESEWNTQESYAGSDYDALMEMILSVRETARKEKQYKLADEIRDKLAEL 463

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G I+ED           RWK++
Sbjct: 464 GIIVEDSATG------ARWKKR 479


>gi|218439673|ref|YP_002378002.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226735050|sp|B7K7T8|SYC_CYAP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218172401|gb|ACK71134.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 486

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 179/489 (36%), Positives = 257/489 (52%), Gaps = 65/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F+ ++P  +RMY CG TVYD+ H+G+AR  +V+DV+ R L++   + 
Sbjct: 3   LTIYNTLTRQKEPFEPLEPGKVRMYCCGITVYDYCHLGHARTCLVWDVVRRYLQWRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RAR+E  S+        ++ +  + + +D  RL        PR
Sbjct: 62  -VQYIQNFTDIDDKILNRARKEGTSM------EDVSERFIKAYFEDMDRLHIQKADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  L+  +   G+AY A+ ++ +   S  +YG  S RK+++ + G   RV   
Sbjct: 115 ATHTLDGIKRLVYELEQKGYAYPADGDVYYSVRSFSDYGKLSGRKLEDLQAGASGRVDLE 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   KK+P DF LWK + P EP WESPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DSESQKKKDPFDFALWKAAKPGEPSWESPWGLGRPGWHIECSAMVRERLGETIDIHVGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI +LL      
Sbjct: 235 DLIFPHHENEIAQSEAATG-KPLARYWMHNGMVKVGGEKMSKSLGNFTTIRDLLA----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLS--------KWPQTST 342
              +    +RL +L THYR P+DFT + L  A        E LL          W Q S+
Sbjct: 289 --QFDPMAVRLFILQTHYRNPLDFTPKALEAATNGWQTLQEGLLFGYLFGEKLGWDQLSS 346

Query: 343 SKGIIDPAVL-----SALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
           +  + +   L      A+ +D N    +  L ++A++  K  ++L               
Sbjct: 347 NSSVREDNPLVQQFQDAVDDDFNFAGGLAVLFEIAKDLRKEGNILVHQEKTETSPEKLKE 406

Query: 383 --PIFNASAHILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   + +LG+E     V +E  +      IE L+++R    K K F+  D IR  L
Sbjct: 407 QWQTLVQLSQVLGLEAHPPQVHRETTDGLTDAEIETLIEQRTQARKAKNFAEGDRIRDDL 466

Query: 436 ESKGFILED 444
           ++KG  L D
Sbjct: 467 KAKGITLID 475


>gi|220917782|ref|YP_002493086.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254765172|sp|B8JDH1|SYC_ANAD2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219955636|gb|ACL66020.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 481

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 150/341 (43%), Positives = 206/341 (60%), Gaps = 20/341 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++++TL  +  E   ++P  +R+YVCGPTVYD++H+G+AR  +V+DV+ R LR    E 
Sbjct: 3   IQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII+RA  E    PI      + S+    F +D   L  L P  +PR
Sbjct: 62  -VRFVRNFTDVDDKIIQRA-NERGEDPI-----ALASRFADAFHEDMDALGNLRPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + HIP+++ LI  ++  G AY   N ++ +     P YG  S+R +D+   G RV    
Sbjct: 115 VSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAM+  +LG   D+H GG DL+FP
Sbjct: 175 AKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFP 234

Query: 244 HHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           HH NEIAQS  A       E  A  W+HNGF+ ++  KMSKS GNF TI ++L   +F G
Sbjct: 235 HHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVL--ARFDG 292

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +     +R  +L THYR   +F+ Q L EAE  LS   +T
Sbjct: 293 EA-----LRFFLLGTHYRRDFNFSDQVLAEAERRLSALYET 328


>gi|297200591|ref|ZP_06917988.1| cysteinyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197709716|gb|EDY53750.1| cysteinyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 465

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 170/487 (34%), Positives = 252/487 (51%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   E 
Sbjct: 3   IRLYDTSARQIRDFAPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT+VRN+TDIDDKII +A  Q+ P   I         +N + F    T L CL P+++P
Sbjct: 62  -VTFVRNVTDIDDKIIAKAAEQKRPWWAIG-------YENERAFNDGYTALGCLPPSYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+ +M+ ++Q +I  GHAYE++  + FD  S P Y   SR+++D     +   E  
Sbjct: 114 RATGHVTEMVEMMQGLIERGHAYESDGNVYFDVRSFPGYLELSRQELDNLLQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK + P EP W +PWG GRPGWH+ECSAM+  YLG  FDIHGGGLDLIFP
Sbjct: 173 GKRDPRDFAMWKSAKPGEPTWSTPWGPGRPGWHLECSAMAHKYLGTAFDIHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQAKAFG--DDFAQYWVHNAWVTMAGDKMSKSLGNSVLVSEMV-------KQWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGI-------IDPAVLS 353
             V+R  +   HYR  I+++   L EAE   ++   + Q    K         + PA   
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEDALREAESAFARIEGFVQRVVEKAGPVEPSAEVPPAFAE 343

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH---- 400
           A+ +DL    A+  +H   R+                L    A   +LG++   EH    
Sbjct: 344 AMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEHWAGE 403

Query: 401 ------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                 L+  +   +  ++ +R      K +++AD IR QL   G  +ED      G + 
Sbjct: 404 TDRGDDLHGVVDSLVRLVLDQREAARARKDWATADAIRDQLGQSGLTIED------GPQG 457

Query: 455 TRWKQKP 461
            RW   P
Sbjct: 458 PRWTLGP 464


>gi|308070997|ref|YP_003872602.1| Cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305860276|gb|ADM72064.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 467

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 178/491 (36%), Positives = 259/491 (52%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+ R    F  ++P  ++MYVCGPTVYD+ HIGNARP+IVFDV+   L Y   + 
Sbjct: 3   LQIYNTMTRSREPFAPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I +AR+      ++  +S +  K    + +D   L   A +  PR
Sbjct: 62  -VNYVVNFTDVDDKLIRKARE------LDMDVSAVAEKFIAAYYEDLAGLNVPAASMNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ ++  G+AYE + ++ + T    +YG  S + ++E + G R+     
Sbjct: 115 VTESMDLIIDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DF+LWK + P E  W SPWG GRPGWHIECSAM+ HYLG   DIHGGG DL FPH
Sbjct: 175 KENAEDFVLWKAAKPGEIHWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE E AQS      +  +  W+HNG++ ++  KMSKS GN I + +L    K        
Sbjct: 235 HECECAQSEVITG-KPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRAHHK-------P 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------QTSTSKGI 346
             +R  ML THYR P+++  + +++AE  + +                    + ST    
Sbjct: 287 EALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLANALEGNGEVSTELQT 346

Query: 347 IDPAVLSA----LYNDLNTVSAIQAL--------HKLARESTKNHDL---LPIFNASAHI 391
               +L      + +D NT  AI A+        H L R+     +L   L  F++   +
Sbjct: 347 KLDGILQQFGEKMNDDFNTPDAITAVFDWVSEANHLLQRDVVHQAELQAVLHTFHSMNSV 406

Query: 392 LGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           L I  E  +E L+      IE+L+ ER+   K K +S AD IR  L +KG +LE     D
Sbjct: 407 LRIYSEPSEELLDDE----IEQLIAERVEARKTKNWSRADEIRDLLAAKGIVLE-----D 457

Query: 450 NGQRMTRWKQK 460
             Q M RW++K
Sbjct: 458 TAQGM-RWRRK 467


>gi|228912829|ref|ZP_04076476.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228943896|ref|ZP_04106281.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228815729|gb|EEM61965.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228846765|gb|EEM91770.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 440

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 173/464 (37%), Positives = 248/464 (53%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +P       I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 59  EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---- 323
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+    
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 324 ------VQRLTEAEILLSKWPQTSTS------KGIID-----PAVLSALYNDLNTVSAIQ 366
                 ++R+  A   L    ++ST       K + D      A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTK----NHDLLPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +     H    +  A          ILG+E+ +E L   +   IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKDRNIILED------TAQGTRWKR 439


>gi|291563603|emb|CBL42419.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 469

 Score =  293 bits (750), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 180/477 (37%), Positives = 251/477 (52%), Gaps = 55/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  ++P  ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTLTKRKEEFVPVEPGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E       DA   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEGV-----DA-ETISKRYIAECKKDMEGMNIEPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +I  +I  G+AY  A+  + +      +YG  S + +D+ + G R   V 
Sbjct: 113 ATEEICGMLNMISTLIEKGYAYVAADGTVYYSVRKFKDYGKLSHKNLDDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS M+  YLG   DIH GG DL
Sbjct: 173 GEEGKQDPNDFVLWKPKKEGEPYWESPWCEGRPGWHIECSVMAKRYLGDEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSEAANG-KPFAKYWMHNAFLNIDNKKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTS 343
            +   V+R  ML  HYR P++F+                 +++L EAE   +    T   
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTGMEKLREAEAKAADGTMTEEE 344

Query: 344 KGIIDPAV------LSALYNDLNTVSAIQALHKLAR--------ESTKNHD--LLPIFNA 387
                 A+       +A+ +D NT  AI A+ +L +         STK +   +      
Sbjct: 345 LENKKKAMELVAKYEAAMDDDFNTADAISAIFELIKLSNSTVSGASTKEYVSWMKNEIQR 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              ++GI    E   + +   +E L+ +R    K K F+ AD IR +L   G +LED
Sbjct: 405 LCDVMGI--ITEKKAEVLDSEVEDLIAQRQAARKAKNFALADEIRGKLLDMGIVLED 459


>gi|221198382|ref|ZP_03571428.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208941|ref|ZP_03581938.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171224|gb|EEE03674.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182314|gb|EEE14715.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 465

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 164/395 (41%), Positives = 229/395 (57%), Gaps = 36/395 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWSE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHD 380
                  +A+ +D NT  AI  L +LA E  +  D
Sbjct: 343 PHAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRD 377


>gi|197122993|ref|YP_002134944.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|229558614|sp|B4UGC3|SYC_ANASK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|196172842|gb|ACG73815.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 481

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 150/341 (43%), Positives = 206/341 (60%), Gaps = 20/341 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++++TL  +  E   ++P  +R+YVCGPTVYD++H+G+AR  +V+DV+ R LR    E 
Sbjct: 3   IQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII+RA  E    PI      + S+    F +D   L  L P  +PR
Sbjct: 62  -VRFVRNFTDVDDKIIQRA-NERGEDPI-----ALASRFADAFHEDMDALGNLRPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + HIP+++ LI  ++  G AY   N ++ +     P YG  S+R +D+   G RV    
Sbjct: 115 VSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAM+  +LG   D+H GG DL+FP
Sbjct: 175 AKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFP 234

Query: 244 HHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           HH NEIAQS  A       E  A  W+HNGF+ ++  KMSKS GNF TI ++L   +F G
Sbjct: 235 HHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVL--ARFDG 292

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +     +R  +L THYR   +F+ Q L EAE  LS   +T
Sbjct: 293 EA-----LRFFLLGTHYRRDFNFSDQVLAEAERRLSALYET 328


>gi|161524376|ref|YP_001579388.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350869|ref|YP_001946497.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|229558623|sp|A9AHN6|SYC_BURM1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160341805|gb|ABX14891.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334891|dbj|BAG43961.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 465

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 164/395 (41%), Positives = 229/395 (57%), Gaps = 36/395 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHD 380
                  +A+ +D NT  AI  L +LA E  +  D
Sbjct: 343 PHAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRD 377


>gi|206560514|ref|YP_002231278.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|229558622|sp|B4ED73|SYC_BURCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|198036555|emb|CAR52452.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 465

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 177/472 (37%), Positives = 250/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D + L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDESALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A++ ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQASDGDVNYSVRKFTNYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W S +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   +D   L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVDADTLALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQASGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLEAGIALED 454


>gi|253577158|ref|ZP_04854478.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843402|gb|EES71430.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 468

 Score =  293 bits (749), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 182/493 (36%), Positives = 254/493 (51%), Gaps = 64/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL---RYYY 61
           ++IYNTL R   EF ++ P  ++MYVCGPTVY + HIGNARPMI FDV+   L   RY  
Sbjct: 3   LQIYNTLTRAKEEFVSLTPGKVKMYVCGPTVYGYIHIGNARPMIFFDVVRSYLENQRY-- 60

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV N TD+DDK+I +A + + ++P       +     + + +D   L     T 
Sbjct: 61  ---DVNYVVNFTDVDDKLIRKAEEMNLTVPE------VAEMFIKAYYEDLDGLGIPRATA 111

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PR T ++  +I  I+++   G AYE+  ++ F T   P YG  S + I E + G R+  
Sbjct: 112 NPRVTENMDVIINFIRDLEQKGFAYESGGDVFFRTHKFPEYGKLSGQNIGELQFGIRIDV 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK + P E  W SPWG GRPGWHIECSAMS   LG   DIHGGG DL 
Sbjct: 172 DERKEHPEDFVLWKAAKPGEIHWSSPWGEGRPGWHIECSAMSRQLLGDTLDIHGGGQDLQ 231

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHE E+AQS  A   +  A  W+HNG++N++G KMSKS GN + + +L    K     
Sbjct: 232 FPHHECEVAQSEAATG-KPLARYWMHNGYINIDGEKMSKSLGNGVLVKDLRAQYK----- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSK--- 344
                IR  ML THYR P++F+ + + +AE                L+  PQ   +K   
Sbjct: 286 --REAIRYFMLSTHYRNPLNFSEETMQQAERSVERISNAANNLRHRLNTAPQGGETKVTP 343

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHK--------LARESTKNHDL---LPIFNA 387
                   I     + + +D NT  AI A+ +        L +  T   DL   L +F  
Sbjct: 344 EWAEKLETIRNLFHAKMQDDFNTPDAITAVFEWVSEVNALLQQPVTVRGDLEAALQLFEE 403

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +L I +  E   +     IE L+ ER    K K ++ AD IR  L+++G +LED   
Sbjct: 404 MNGVLRIALPPE--TELPGEEIEALIAERAEARKAKNWARADEIRDLLDARGIVLED--T 459

Query: 448 PDNGQRMTRWKQK 460
           P       RW++K
Sbjct: 460 PQG----MRWRRK 468


>gi|120610992|ref|YP_970670.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|187629785|sp|A1TPK8|SYC_ACIAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120589456|gb|ABM32896.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 459

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 166/391 (42%), Positives = 227/391 (58%), Gaps = 35/391 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + +F  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R LR   G +
Sbjct: 3   LRIYNTLSRAMEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSS-GLR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            VTYVRNITDIDDKII RA        +   I+I  +T + T    +D   LA   PT +
Sbjct: 62  -VTYVRNITDIDDKIIRRA--------VERGITIRQLTDEMTAAMHEDIGALAIEPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ LI  +   G AY A + ++ +       YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLSLIGTLERKGLAYRAGSGDVNYAVRRFEGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 173 QDDKQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI E+L+     
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVLQQVD-- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA 350
                A  +R  ++ THYR P++++   L +A   L +         P+   +    DP 
Sbjct: 290 -----AETLRFFIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGAIDWADPH 344

Query: 351 VL---SALYNDLNTVSAIQALHKLARESTKN 378
                +A+  D  T  A+  L +LA E  + 
Sbjct: 345 AARFKAAMDEDFGTPEAVAVLFELAGEVNRT 375


>gi|221194861|ref|ZP_03567918.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185765|gb|EEE18155.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 513

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 150/326 (46%), Positives = 195/326 (59%), Gaps = 19/326 (5%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT   +   F  ID   +RMYVCGPTVYD  HIGNAR  + FDV+ R L +   E  V
Sbjct: 3   VYNTQTHRKETFTPIDEGKVRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLMHAGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+ +N+TD+DDKII RA ++  +         +  + +  F++   R   L P  +PRAT
Sbjct: 61  TFAQNLTDVDDKIINRALEQGRTA------QEVAEEYSSAFIEQMHRFNILDPDIRPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           + I  M+ +IQ++I  G AY   + ++ F   +  NYG  S R +D+ + G RV     K
Sbjct: 115 HEINAMVEMIQSLIDQGFAYAVPSGDVYFSVRADHNYGVLSGRDLDQLRAGERVEVNTEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP W SPWG GRPGWH EC AM   YLG   DIHGGG DL+FPHH
Sbjct: 175 RDPFDFALWKTAKPGEPSWPSPWGEGRPGWHSECCAMIHRYLGTPIDIHGGGADLVFPHH 234

Query: 246 ENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           ENE AQ SCC    E  AN W+H G L +EG KMSKS GNF T+ E+L+       S+ A
Sbjct: 235 ENETAQASCCWH--EPLANYWMHAGMLRVEGEKMSKSLGNFYTLKEVLD-------SYSA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA 330
             +RL ML THYR  +DF+ +RL  A
Sbjct: 286 DAVRLLMLQTHYRASLDFSFERLDGA 311


>gi|256374515|ref|YP_003098175.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255918818|gb|ACU34329.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 464

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 170/476 (35%), Positives = 253/476 (53%), Gaps = 50/476 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + IY+T  R++ EF+        +YVCG TV    HIG+ R  + FDVL R L   +  
Sbjct: 2   SLHIYDTASRELREFRPQISGTASIYVCGATVQGVPHIGHVRSGLNFDVLRRWLARTH-- 59

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V  VRN+TDIDDKI+ ++ Q H     + A      ++ + F      L CL PT+ P
Sbjct: 60  ERVVLVRNVTDIDDKILVKSAQ-HDRTWWDWAF-----EHERAFDDAYEALGCLPPTYAP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+ QM+ L++ +I  GHAY AN ++ F  SS P YG  S +++DE + G    E  
Sbjct: 114 RATGHVTQMVELMRRLIDAGHAYAANGDVYFSVSSFPEYGKLSGQRVDEVQQGE--SELT 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FD+HGGG+DLIFP
Sbjct: 172 GKRDPRDFTLWKAAKPGEPSWPTPWGDGRPGWHLECSAMATEYLGSTFDVHGGGIDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS      +  A  W+HN ++ L G KMSKS GN ++I  +LE  +       
Sbjct: 232 HHENEQAQSRAVG--DGFARYWMHNAWVTLSGEKMSKSLGNTVSIPAMLEQVR------- 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTS---TSKGIIDPAVLS 353
           AP +R  ++  HYR  I+++   L EA       E  L +  + +    + G +    +S
Sbjct: 283 APELRYYLVGPHYRSTIEYSPTALDEAVTAYRRIESFLRRVVERTGAVDAGGELGEDFVS 342

Query: 354 ALYNDLNTVSAIQALHKLARES---------TKNHDLLPIFNASAHILGIEVCKEH---- 400
           ++ +D+ T  A+ A+HK  RE          T          A   +LG++   E     
Sbjct: 343 SMDDDMGTPGALAAVHKRVREGNTALESGDDTGARAAASSVRAMTAVLGLDPLSERWSAS 402

Query: 401 ------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  ++ +   +++++ +R+   K + F+ AD +R  L + G  +ED   PD 
Sbjct: 403 AGRESGTSRALKALVDRVLADRVAARKERDFARADALRDSLLAAGIAVED--TPDG 456


>gi|159903756|ref|YP_001551100.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888932|gb|ABX09146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 516

 Score =  293 bits (749), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 187/501 (37%), Positives = 266/501 (53%), Gaps = 76/501 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+ NTL ++   F  + P+++ +Y CG TVYD  H+G+AR  I +DVL R    + G K
Sbjct: 20  FKLTNTLTQQTEVFNPLKPNHVTIYCCGVTVYDLCHLGHARSYISWDVLRRYF-IWQGYK 78

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII RA +E      N  ++ ++ +N ++F KD   L  L P   PR
Sbjct: 79  -VTFVQNFTDIDDKIISRAAKE------NSTMNEVSERNIKEFHKDMDSLGILRPDRMPR 131

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  I  +  +IQ++   G AY    ++ F     PNYG  S R +  Q++    RV EK
Sbjct: 132 ATKCIDGIRSMIQDLEAKGAAYSTEGDVYFAVMRHPNYGKLSGRDLSAQQLNAEGRVTEK 191

Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 192 EKARKQHPFDFALWKSAKDGEPSFSSPWGSGRPGWHIECSAMVLQELGETIDIHLGGADL 251

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   +K AN W+HNG +N+ G+KMSKS GNF TI  LLE       
Sbjct: 252 VFPHHENEIAQSEAATG-KKLANYWLHNGMVNVGGQKMSKSLGNFTTIRSLLE------E 304

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLS-------KWPQTSTSK 344
              A  +R  +L  HYR+P+DFT++ L  A          I L        +WP+   +K
Sbjct: 305 GVSAMTLRFFILQAHYRKPLDFTLEGLEAASSGWKGLNTAICLGEVNKNILQWPKHPVNK 364

Query: 345 GI---------------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKN-HDL 381
                            +    +  + +DLNT +A+  L +LAR       E  +N +  
Sbjct: 365 TTETNSTPTEAREELDHLRQRFIDVMNDDLNTSAAMAVLFELARPLKSIANEIERNPYKQ 424

Query: 382 LPIFNAS------------AHILGI--EVCKEHLNKNISI----AIEKLVQERLILLKMK 423
           +P   A             A++LG+  E+ +E+L++N SI     IE+ +++R    +++
Sbjct: 425 IPDIKAKKLYARWLTLVELANVLGLQGEMKQENLSRNSSIPNKSVIEEAIKQRSAAKRVR 484

Query: 424 KFSSADYIRKQLESKGFILED 444
            +  AD IR  L+ +G  L D
Sbjct: 485 NYEKADQIRDDLKKQGIELID 505


>gi|229009599|ref|ZP_04166825.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053936|ref|ZP_04195370.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229131097|ref|ZP_04260009.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229165078|ref|ZP_04292873.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228618341|gb|EEK75371.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228652310|gb|EEL08235.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228721354|gb|EEL72875.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751621|gb|EEM01421.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 449

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 170/471 (36%), Positives = 250/471 (53%), Gaps = 57/471 (12%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I
Sbjct: 3   LEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLI 60

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           + A +    +P       I  +  + + +D T L C   T  PR T ++  +I  IQ ++
Sbjct: 61  KAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELV 114

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G+AYE+  ++ F T     YG  S + I + + G R+     K++P DF LWK +   
Sbjct: 115 NKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEG 174

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      + 
Sbjct: 175 EIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KT 233

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  W+HNG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI
Sbjct: 234 FARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPI 286

Query: 321 DFT----------VQRLTEAEILLSKWPQTSTS-----------KGIIDPAVLSALYNDL 359
           +F+          ++R+  A   L    ++ST                  A   A+ +D 
Sbjct: 287 NFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMEKFQVAFEEAMDDDF 346

Query: 360 NTVSAIQALHKLARESTK----NHDLLPIFNASA-------HILGIEVCKEHLNKNISIA 408
           NT +AI  L+ +A  + +     H    +  A          ILG+E+ +E L   +   
Sbjct: 347 NTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFSILGLELAQEEL---LDEE 403

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IE L+Q+R+   + + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 404 IEALIQKRIEARQNRDFALSDQIRDDLKGRNIILED------TAQGTRWKR 448


>gi|209518045|ref|ZP_03266876.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209501549|gb|EEA01574.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 476

 Score =  292 bits (748), Expect = 6e-77,   Method: Compositional matrix adjust.
 Identities = 177/470 (37%), Positives = 256/470 (54%), Gaps = 45/470 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFDV+ R LR    
Sbjct: 13  ESLRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDVVQRWLRTL-- 70

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P  +
Sbjct: 71  GYNVTYVRNITDIDDKIIKRA------VENGETIKSLTDRFIAALHEDADALGIARPDIE 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A++ ++ +       YG  S + +++ + G RV  
Sbjct: 125 PRATDFIPQMLGMIETLEKNGYAYQASDGDVNYAVRKFEGYGKLSGKSLEDLRAGERVAA 184

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 185 NDAKQDPLDFVLWKQAKPEEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGGGQ 244

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 245 DLQFPHHENEIAQSEAATG-QTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 298

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  +   HYR P++++   + +A   L++   T+      D A L      
Sbjct: 299 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARL-YTALKDVTPDTAALDWNEAY 355

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--EVCKEHLNK 403
                +A+ +D NT  A+  L +LA E  +  D  L     A   +LG+     + +L  
Sbjct: 356 AQRFQTAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQH 415

Query: 404 NISIAIEKLVQERLILL---------KMKKFSSADYIRKQLESKGFILED 444
               A E  ++   I           + K +++AD IR +L   G  LED
Sbjct: 416 AAGAAAEGALEPAAIEAKIAARIAAKQAKDYAAADRIRAELLDAGVALED 465


>gi|163847402|ref|YP_001635446.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525251|ref|YP_002569722.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668691|gb|ABY35057.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449130|gb|ACM53396.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 472

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 255/491 (51%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R++   + I+P  +RMYVCG T YD AHIG+A   IVFDV+ R L +   E 
Sbjct: 3   IQLYNTLSRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDVIRRYLEFRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TDIDDK+I RA        +      ++ +   +F+     +  L  T  PR
Sbjct: 62  -VRHIVNFTDIDDKVIARANA------LGQDPLTLSGQYAAEFLAQLQAMNVLPATAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  +P +I  +Q +I  G+AY  + ++ F      +YG  S R +DE   GTR      
Sbjct: 115 VSTTMPAIIAFVQGLIERGYAYVVDGDVYFRVRRDEDYGKLSGRSLDEMLSGTRFEVDPR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF LWK + P EP WESPWG GRPGWHIECSAM+  +LG   DIHGGG DLIFPH
Sbjct: 175 KESPADFALWKAARPGEPSWESPWGPGRPGWHIECSAMAMEHLGPQIDIHGGGTDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL------EGRKMSKSNGNFITINELLETKKFG 298
           HENEIAQS      +  A  W+HNG L L      +  KMSKS GN +TI + L      
Sbjct: 235 HENEIAQSESLTG-QCFARYWVHNGMLQLVNPQTRQVEKMSKSLGNVVTIADFLS----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTE----AEILLSKW-PQTSTSKGIIDPAV-- 351
              + A V RL +L + YR P+ +  +   +     E LLS   P T T      PAV  
Sbjct: 289 --RYDADVFRLIVLSSSYRSPLTYNDEVAADNQRKLERLLSALAPATGTVHE--GPAVTA 344

Query: 352 ------------LSALYNDLNTVSAIQALHKL------ARESTKNHDLLPIFNAS----A 389
                       ++A+ ND N+ +A+ AL  L      AR++  ++D L I   +    A
Sbjct: 345 LREAAALARERFITAMDNDFNSPAALAALFDLVRAINAARDAGLDNDALAIGQQTLRELA 404

Query: 390 HILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +LG+ +              IE L++ R  L K K+++ AD +R +L   G  LED   
Sbjct: 405 GVLGLRLQPRQRTTGAEATPFIELLIEVRSELRKAKQYALADMVRNRLSDLGVTLED--- 461

Query: 448 PDNGQRMTRWK 458
              G + TRWK
Sbjct: 462 ---GPQGTRWK 469


>gi|257866301|ref|ZP_05645954.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873183|ref|ZP_05652836.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257800259|gb|EEV29287.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807347|gb|EEV36169.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 470

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 257/494 (52%), Gaps = 64/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   FQ ++   ++MYVCGPTVY++ HIGN R  + FD + R   Y     
Sbjct: 2   IKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++   + P       +  +    F +DT  L     T  PR
Sbjct: 60  TVDYLMNFTDVDDKIIRAAKELGTTAPE------VAERFINAFNEDTAALNVKPATMNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
             +HI  +I  I  ++  G+AY  N ++ + T    +YG  S + IDE ++G   R+ E+
Sbjct: 114 VMDHIEDIIAFIVALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRIGEE 173

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  WESPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS    +  KT AN W+HNG++ +  +  KMSKS GNF+T++E++      
Sbjct: 234 FPHHENEIAQSEA--KTGKTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKG 345
            +     V+R  +  T YR PI ++   L EA+  L K   T               S  
Sbjct: 286 -KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDE 344

Query: 346 IIDPAVLS--------ALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFN 386
            I+ AVL          + +D N  + I  +++LA+           +       L  F+
Sbjct: 345 EINAAVLEEFEERFVKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLAAGLAKFS 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               I GI    E L   +   IE+L+ ER+   K K F+ +D IR +L+ +G ILED  
Sbjct: 405 EWLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILED-- 459

Query: 447 NPDNGQRMTRWKQK 460
            P      TRW+++
Sbjct: 460 TPQG----TRWRRE 469


>gi|329666764|gb|AEB92712.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 470

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 173/480 (36%), Positives = 256/480 (53%), Gaps = 60/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 1   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        +  +  + F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARKEHTTV------EKLAERYIKAFMEDTEALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ I ++I  +Q++I  G AYE +  + +     PNYG  S + I E + G        
Sbjct: 113 ATHEIKEIIDFVQDLIDKGFAYEVDGNVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STS 343
             +     V+R  M    YR PI+++   L +AE +L ++  T                 
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLDDENERLED 344

Query: 344 KGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------PI 384
            G+ D         + A+ +D N  +A+  ++ LA  +T N+ L               +
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLA--TTLNNHLQKDQVDKPALKRAKKL 402

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             A   I G+   +E    +    IEKL+ +R    K K ++ +D +R +L++KG ++ED
Sbjct: 403 LIAWLEIFGVSFKEEQAENDDE--IEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIED 460


>gi|304405640|ref|ZP_07387299.1| cysteinyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304345679|gb|EFM11514.1| cysteinyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 477

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 179/481 (37%), Positives = 249/481 (51%), Gaps = 57/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNT+ R    F+   P  ++MYVCGPTVYD+ HIGNARP+I FDV+ R L     E 
Sbjct: 3   VSIYNTMTRAQEAFKPQQPGQVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLEVTGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +A Q   ++P   A + I +     F +D   L     T  PR
Sbjct: 62  -VNYIVNFTDVDDKLIRKAEQLGTTVP-EVADTFIAA-----FNEDIEALGVHKATRNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+HIP ++  IQ ++  G AYE+  ++ F T+    YG  S +  +E ++G R+     
Sbjct: 115 VTDHIPLIVSFIQGLVDKGIAYESAGDVYFRTNQFEAYGKLSHQNTEELQLGIRIEIDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL FPH
Sbjct: 175 KQHAQDFVLWKSAKPGEIHWSSPWGNGRPGWHIECSAMAREYLGDTLDIHGGGHDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE E+AQS      +  AN W+HNG++++   KMSKS GN IT+ ELL+  K        
Sbjct: 235 HECEVAQSESLTG-KPLANYWMHNGYVHINNEKMSKSLGNGITVRELLKRTK-------P 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE------------------ILLSK--WPQTSTSK 344
             IR  +L THYR P++F+   + +AE                  +L  K   PQ + + 
Sbjct: 287 QAIRYFVLATHYRSPLNFSDDTIAQAENSVERIVNCAGNLLHRLSVLGEKPLEPQQAVAA 346

Query: 345 GIIDP--AVLSALY--------NDLNTVSAIQALHKLAREST---KNHDLLPIFNASA-- 389
              D   A L+A+         +D NT  AI AL  L  E+    +  D       +   
Sbjct: 347 SGNDALDARLAAIAGQFAAKMNDDFNTPDAITALFDLVSEANGAMQRQDASAAELQALLA 406

Query: 390 ------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                   LG+    +   + +   IEKL+ ER    + K ++ AD IR  L +   +LE
Sbjct: 407 LLEQFDRTLGLLPRADEAGELLDEQIEKLIVERTEARQAKNWARADEIRDLLAADNIVLE 466

Query: 444 D 444
           D
Sbjct: 467 D 467


>gi|84488953|ref|YP_447185.1| hypothetical protein Msp_0124 [Methanosphaera stadtmanae DSM 3091]
 gi|84372272|gb|ABC56542.1| CysS [Methanosphaera stadtmanae DSM 3091]
          Length = 456

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 176/472 (37%), Positives = 265/472 (56%), Gaps = 50/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+Y+T+ R+  E +  + + I+++VCGPTVYD++HIG+AR  I FDV+ R L++     
Sbjct: 2   IKVYSTMTRQKEELKVTN-NKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKH--EGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII+RA++ +   P+      ++ +  ++++KD   L         R
Sbjct: 59  SVFYLQNITDIDDKIIKRAKENNED-PLE-----LSHRFEKEYLKDMETLNVSNVNFYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ ++I  IQ++I  G+AY+    + FD S   ++G  S R +D+ +  TR+     
Sbjct: 113 ATEHMNEIINQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDDLQ-NTRIQIDST 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK+    +P WESPWG GRPGWHIE +A++  Y G  +DIHGGGLDLIFPH
Sbjct: 172 KKDPKDFALWKKQDE-QPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+ EIAQ   +   E     W+H GFLN+ G KMSKS GNFITI ELLE           
Sbjct: 231 HDAEIAQMEASSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIV-------TP 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE-----------ILLSKWPQTSTSKG-IIDPAV- 351
            V R  +L THYR PIDF+   L +AE           I++ K  + +  +G ++D  + 
Sbjct: 284 EVYRFFVLSTHYRSPIDFSEDTLKQAENSLKRIQNTGKIIIDKLTEDNLPEGKVLDEDLE 343

Query: 352 ------LSALYNDLNTVSAIQAL----HKLARESTKN-------HDLLPIFNASAHILGI 394
                  +A+ ND NT  A+  L    HK+ +  + N       ++++  F     ILG 
Sbjct: 344 LFKEEFFNAMNNDFNTPIALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESILGF 403

Query: 395 E-VCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILED 444
           + + ++ +  ++S  +  ++ E R  L   K +  AD IR +L +    LED
Sbjct: 404 DIIVEDDMVSDVSGDLLNIITEIREDLRSKKDWDLADKIRDELANLDITLED 455


>gi|229824608|ref|ZP_04450677.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
 gi|229785979|gb|EEP22093.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
          Length = 480

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 259/493 (52%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+   F+ I    +  YVCGPTVY++ HIGNAR  + FD + R  +Y   + 
Sbjct: 9   IQVYNTLTRQKEVFRPIKEGQVAFYVCGPTVYNYIHIGNARSAVAFDTIRRYFQYRGYQ- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A  E  S P       I  K    F +DT +L   A T  PR
Sbjct: 68  -VNYVSNFTDVDDKIIKAAIAE-GSTP-----EAIADKYIAAFKEDTGQLNIQAATVHPR 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE------QKMGTR 178
              +I ++I  +Q +I  G+AYE+  ++ F T S  +YG  S + +++      +++   
Sbjct: 121 VMENIEEIIAFVQTLIEKGYAYESEGDVYFKTESFKDYGHLSDQSLEDLLVGASERLDQA 180

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V E+  K NP DF LWK + P E  W+SPWG GRPGWHIECS M++ YLG   DIHGGG 
Sbjct: 181 VAER--KANPLDFALWKTAKPGEIAWDSPWGPGRPGWHIECSVMATKYLGDTIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETK 295
           DL FPHHENEIAQS  C       A+ W+HNGF+ +  +  KMSKS GNF+ + +LL   
Sbjct: 239 DLTFPHHENEIAQSEACTGHT--FAHYWLHNGFVTIGKQDEKMSKSLGNFVLLRDLLA-- 294

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGI 346
                ++   VIR  +  THYR P+ +    +TEA+  ++K           Q   S  +
Sbjct: 295 -----AYDPMVIRYMLATTHYRRPLRYDEAVITEAQANVNKLREAIRRLKHRQEQASADL 349

Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-------LPIFNA 387
                       I    ++A+ +D N  + I AL  L +   +  DL       L +++ 
Sbjct: 350 EGHETWLAEINGIQEQFVTAMDDDFNASNGITALFDLVKSLNRYLDLELVSQVVLSLYDK 409

Query: 388 SAH----ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             H    + G+++  E  + +I   IE L++ER      K F+ +D IR QL+ +G +L+
Sbjct: 410 VLHDLLAVFGLDL--EDKSNSIDQEIEALIEERRQARANKDFARSDAIRDQLKEQGILLD 467

Query: 444 DYKNPDNGQRMTR 456
           D       +R+ R
Sbjct: 468 DTPQGTVWKRVNR 480


>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109894880|sp|Q2IQG7|SYC_ANADE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 481

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 157/374 (41%), Positives = 219/374 (58%), Gaps = 32/374 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++++TL  +  E   ++P  +R+YVCGPTVYD++H+G+AR  +V+DV+ R LR    E 
Sbjct: 3   IQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII+RA  E    PI      + S+    F +D   L  L P  +PR
Sbjct: 62  -VRFVRNFTDVDDKIIQRA-NERGEDPI-----ALASRFADAFHEDMDALGNLRPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + HIP+++ LI  ++  G AY   N ++ +     P YG  S+R +D+   G RV    
Sbjct: 115 VSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEPGE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+  +LG   D+H GG DL+FP
Sbjct: 175 AKRDPLDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLVFP 234

Query: 244 HHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           HH NEIAQS  A       E  A  W+HNGF+ ++  KMSKS GNF TI ++L   +F G
Sbjct: 235 HHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVL--ARFDG 292

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGI---IDPAV 351
            +     +R  +L THYR   +F+ Q L EAE  LS   +T         G+    +PA 
Sbjct: 293 EA-----LRFFLLGTHYRRDFNFSDQVLAEAERRLSALYETVEKAERLGAGVEPGAEPAF 347

Query: 352 L----SALYNDLNT 361
           +    +AL +D NT
Sbjct: 348 VERARAALDDDFNT 361


>gi|332295578|ref|YP_004437501.1| cysteinyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178681|gb|AEE14370.1| cysteinyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 489

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 185/491 (37%), Positives = 262/491 (53%), Gaps = 66/491 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I +YNTL ++   F  I+   IRMYVCG TVYD+ H+G+ R  +V+DV  RL      E
Sbjct: 5   QIYLYNTLTKRKELFVPIENKKIRMYVCGVTVYDYCHLGHGRSYVVWDVWKRLFLSQGFE 64

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +++N TDIDDKII+R+R+E            +T+K    + +D  +L  L  T  P
Sbjct: 65  --VFHIQNFTDIDDKIIKRSREEKVDW------KELTNKFIDAYFEDMDKLNVLRATLYP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT++I +MI +I  +I  G+AY+A  +I+F      +YG  S + ID+     RV    
Sbjct: 117 KATDYIDEMIKIITGLIEKGYAYKAGGDIVFSIKKFKDYGKLSGKSIDDLIENYRVDSSS 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P EP W+SP+G+GRPGWHIECSAMS  + G  FDIH GG DLIFP
Sbjct: 177 YKESPLDFVLWKTSKPDEPFWDSPFGKGRPGWHIECSAMSLKHFGSPFDIHAGGQDLIFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      +K  N W+HNGF+ + G KMSKS GNF T+ ++ +        + 
Sbjct: 237 HHENEIAQSEGFTG-KKFVNYWLHNGFVTISGEKMSKSLGNFKTLRDIYQ-------QYD 288

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTSKGIIDPA-------VLS 353
             V+RL +L +HYR P+ F ++ L  A+    K        +S G+I           ++
Sbjct: 289 PMVLRLFILSSHYRSPVVFNLENLMAAKEAWDKIKNAIDVCSSFGLIGELKAAPPSNFIA 348

Query: 354 ALYNDLNTVSAIQALHKLAR------ESTKNHDLLPIFNASA----------HILGIE-- 395
           AL +DLNT  AI  + +  R      +S        + NA +           ILG++  
Sbjct: 349 ALCDDLNTPLAISYIFEKVRFINSIVDSYSKSQAADLKNAISFNINEVLSMIEILGLKYK 408

Query: 396 -----VCKEHLNK----------NISIAIE-------KLVQERLILLKMKKFSSADYIRK 433
                  KE L+K          N+ +  E       KL+  R  L K K + +AD IR 
Sbjct: 409 PDVLFYSKEQLSKEFDSYELTEVNLELFDELTTENMFKLLSFREFLKKKKLYDNADKIRN 468

Query: 434 QLESKGFILED 444
            L  KG +LED
Sbjct: 469 FLNKKGIVLED 479


>gi|307067211|ref|YP_003876177.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|306408748|gb|ADM84175.1| Cysteinyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 440

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 175/462 (37%), Positives = 242/462 (52%), Gaps = 39/462 (8%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y  G K V Y+ 
Sbjct: 1   MSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR-GYK-VAYIS 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RAR+E  + P       +  K    F +D T L     T  PR    + 
Sbjct: 59  NFTDVDDKIINRAREEGIT-PQE-----VADKYIAAFREDVTALGVKPATRHPRVVEFMA 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PEKYHKKN 187
            +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E   K+N
Sbjct: 113 DIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEETARKEN 172

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
           P DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH N
Sbjct: 173 PVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTN 232

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           EIAQS  A   +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T           V+
Sbjct: 233 EIAQS-EAKTGKAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT-------LDGQVL 284

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVL--------SALYN 357
           R      HYR+PI+FT + + +AE  L     T      G +D   L        +A+  
Sbjct: 285 RFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKFVAAMDE 344

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASA---HILGIEVCKEHLNKNISIAIEKLVQ 414
           D N  + I  + ++ +     +    +  A A    I GI   +E L+      IE L+Q
Sbjct: 345 DFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEEVLDAE----IEDLIQ 400

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +R      + F +AD IR QL ++G  L D K   +G R TR
Sbjct: 401 KRQEARANRDFETADQIRDQLAAQGIKLLDTK---DGVRWTR 439


>gi|259047744|ref|ZP_05738145.1| cysteine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035935|gb|EEW37190.1| cysteine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 469

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 170/490 (34%), Positives = 247/490 (50%), Gaps = 55/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+   F+ I+   +RMYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IQIYNTLTRQKEAFKPIEEGKVRMYVCGPTVYNYIHIGNARSTVSFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +   +         ++ K  + F +DT  L     T  P 
Sbjct: 61  -VNFVSNFTDVDDKIIRVANETGMTA------EEVSKKYIEAFFEDTNALNVKKATLNPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
             N +  +I  + ++I  G AYE+  ++ F T     YG  S ++I++ +MG    T   
Sbjct: 114 VMNTMDDIIAFVADLIDKGMAYESEGDVYFITEKFEGYGKLSDQRIEDLQMGASNRTASE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K+NP DF LWK + P E  W SPWG+GRPGWHIECS M++ +LG   DIHGGG DL
Sbjct: 174 DDAKKRNPLDFALWKNAKPNEISWNSPWGKGRPGWHIECSVMATKHLGDTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS      +K AN W+HN F+ +   KMSKS GNF+ +++L++       
Sbjct: 234 AFPHHENEIAQSESKTG-KKFANYWMHNAFVTMGEEKMSKSLGNFVLVHDLIQ------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------- 344
                V+R  +   HYR P+ F+   L EA + L K   T  +                 
Sbjct: 286 QLDPQVLRFFLASAHYRRPLKFSEAALQEAAVNLEKVQTTFKNARYRLETAVDALPEDAE 345

Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHK--------LARESTKNHDLLPIFNASAHI 391
                  I+      + +D N  + +  L++        L +E      L  +   +A +
Sbjct: 346 RLAKFAAIEADFQKEMDDDFNAANGMTVLYQWLKEWNVYLEQEVVSKAVLEALLEKAAVL 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            GI    E     +   I+ L++ERL   K K F+ +D IR  L+ +G +LED   P   
Sbjct: 406 FGIFGIVEKQEALLDDDIQALIEERLEARKAKNFARSDEIRDLLKEQGIVLED--TPQG- 462

Query: 452 QRMTRWKQKP 461
              TRW+++ 
Sbjct: 463 ---TRWRREA 469


>gi|58336686|ref|YP_193271.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903247|ref|ZP_04021052.1| cys-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311530|sp|Q5FM34|SYC_LACAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58254003|gb|AAV42240.1| cys-tRNA synthetase cycrs [Lactobacillus acidophilus NCFM]
 gi|227869052|gb|EEJ76473.1| cys-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 477

 Score =  292 bits (748), Expect = 7e-77,   Method: Compositional matrix adjust.
 Identities = 178/503 (35%), Positives = 264/503 (52%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRIYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGYQ- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKITVPE------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEIKDIINFVKVLIDKGYAYEVDGDVYYRAKKFQHYGELSDQNIEQLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKGPDEIAWDSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTDQKFVNYWMHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------TSTS 343
             R     V+R  M    YR  I+++ + L +A  +L ++                T TS
Sbjct: 290 --RKIDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRIADDTPTKTS 347

Query: 344 KGII------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
           + ++      +   ++A+ +D N  +A+ ++          +DLLP+ NA+A+       
Sbjct: 348 EDLVKAINETEEKFVAAMDDDFNVQNALTSI----------YDLLPVVNANANSDNVDKD 397

Query: 391 --------------ILGIEV---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G+++   C +    N    IE+LV +R      K ++++D IR 
Sbjct: 398 ALKLFEEKLAAWLLVFGVDIKKLCAQTTGSNDE-EIEELVSKRDEARNNKDWATSDQIRD 456

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D      G R TR
Sbjct: 457 QLKEMGITIQD---TPQGTRWTR 476


>gi|56752435|ref|YP_173136.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81300471|ref|YP_400679.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|61216122|sp|Q5MZA4|SYC_SYNP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894954|sp|Q31MM7|SYC_SYNE7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56687394|dbj|BAD80616.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81169352|gb|ABB57692.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 478

 Score =  292 bits (747), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 187/494 (37%), Positives = 255/494 (51%), Gaps = 58/494 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ +   ++ +Y CG TVYD+ H+G+AR  IV+D L R L  + G +
Sbjct: 3   LSLYNTLTRQKQRFEPLQAGSVSLYCCGVTVYDYCHLGHARSYIVWDTLRRYL-LWLGYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ R+RQE  ++        I  + TQ + +D  RL  L     PR
Sbjct: 62  -VRYVQNFTDIDDKILRRSRQEGTTM------QAIADRYTQAYFEDMARLNILEADDYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--P 180
           AT+ +  +  LI  +   G AY A+ ++ F      +YG  S RK+++ K G   RV   
Sbjct: 115 ATHTLDGIQRLIAELEDKGFAYAADGDVYFSVRRFQDYGKLSGRKLEDLKAGASGRVESA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K +P DF LWK + P EP W+SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EESLKHDPFDFALWKAAKPEEPAWDSPWGPGRPGWHIECSAMVRDRLGDSIDIHVGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS         A  W+HNG +N+ G KMSKS GNF TI +LL+    GG 
Sbjct: 235 VFPHHENEIAQSEAVTG-HPLARYWLHNGMVNVGGEKMSKSLGNFTTIRQLLDE---GGI 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLS------------KWPQTSTSK 344
           S    V+RL +L  +YR+PIDFT + L       E L               W ++ T  
Sbjct: 291 S--PMVLRLFVLQANYRKPIDFTDEALQACQNGWETLQEGLHFGEHWGDRLGWTESVTVD 348

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNA 387
             +      A+ +DLNT +A+  L +LA+E  +  +LL                      
Sbjct: 349 PDLSDRFRMAMDDDLNTPAALAVLFELAKELRRQQNLLIHEGHLDGDAQQLHQHWVTLVQ 408

Query: 388 SAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            A +LG+E   E    N+    AIE  + +R    + K F+ AD IR  L   G  L   
Sbjct: 409 LAGVLGLEAEPELAETNELDEAAIEDWIAKRHAARQAKDFAEADRIRHYLADLGITL--- 465

Query: 446 KNPDNGQRMTRWKQ 459
              D    +TRW +
Sbjct: 466 --IDQAGGITRWSR 477


>gi|75909922|ref|YP_324218.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|109894882|sp|Q3M6R3|SYC_ANAVT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|75703647|gb|ABA23323.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 486

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 188/507 (37%), Positives = 265/507 (52%), Gaps = 80/507 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+    + ++P  ++MY CG TVYD+ H+G+AR  IV+D + R L +   E 
Sbjct: 3   LTIYNTLTRRQEPLETVEPGKVKMYCCGVTVYDYCHLGHARSYIVWDTIRRYLIWRGFE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RA+++         ++ ++++    +  D  RL  L     PR
Sbjct: 62  -VKYIQNFTDIDDKILNRAKEQ------GSTMAEVSNRFIDAYFADIRRLNVLDADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
            T HIP++  LIQ +   G AY    ++ +     P+YG  S R++++ + G   RV   
Sbjct: 115 VTEHIPEIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVDVE 174

Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P+K H   P DF LWK + P EP W+SPWG+GRPGWHIECSAM    LG   DIHGG
Sbjct: 175 DSEPKKQH---PFDFALWKAAKPGEPAWDSPWGQGRPGWHIECSAMIRSKLGATIDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A  W HNG + + G+KMSKS GNFITI ELL+   
Sbjct: 232 GGDLIFPHHENEIAQSEAAMN-QPLARYWTHNGMVMVNGQKMSKSLGNFITIRELLD--- 287

Query: 297 FGGRSWPA-PV----IRLAMLMTHYREPIDFTVQRLTEAE---------ILLS------- 335
            G  SW   PV    +RL +L  HYR+P+DFT + +  AE         +L         
Sbjct: 288 -GVGSWKGDPVNPMAVRLFVLQAHYRKPLDFTEEAIANAENSWKTLKEGLLFGYQYGEKL 346

Query: 336 KWPQTSTSKGIIDPAVLSALY----NDLNTVSAIQALHKLARESTKNHDLLPIFNAS--- 388
            W Q S     I P + +       +D N    +  L +LA+E  +  ++L     +   
Sbjct: 347 GWGQESA----IIPELATRFQELGDDDFNFSGGLAVLFELAKELRREGNILVHEGTTKTP 402

Query: 389 --------------AHILGIEVC--KEHLNK-NIS-IAIEKLVQERLILLKMKKFSSADY 430
                           +LG+E     E L +  +S   IE L+++R    K K FS +D 
Sbjct: 403 SDELQRQWNTLVTLGKVLGLEATPDDETLTQPGLSDTDIEALIEQRQAARKNKNFSESDR 462

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRW 457
           IR +L+++G  L D  +P      TRW
Sbjct: 463 IRNELQAQGVTLID--SPQG----TRW 483


>gi|257875920|ref|ZP_05655573.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257810086|gb|EEV38906.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 470

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 179/494 (36%), Positives = 256/494 (51%), Gaps = 64/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   FQ ++   ++MYVCGPTVY++ HIGN R  + FD + R   Y     
Sbjct: 2   IKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++   + P       +  +    F +DT  L     T  PR
Sbjct: 60  TVDYLMNFTDVDDKIIRAAKELGTTAPE------VAERFINAFNEDTAALNVKPATMNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
             +HI  +I  I  ++  G+AY  N ++ + T    +YG  S + IDE ++G   R  E+
Sbjct: 114 VMDHIEDIIAFIAALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRTGEE 173

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  WESPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS    +  KT AN W+HNG++ +  +  KMSKS GNF+T++E++      
Sbjct: 234 FPHHENEIAQSEA--KTGKTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKG 345
            +     V+R  +  T YR PI ++   L EA+  L K   T               S  
Sbjct: 286 -KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDE 344

Query: 346 IIDPAVLS--------ALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFN 386
            ++ AVL          + +D N  + I  +++LA+           +       L  F+
Sbjct: 345 EVNAAVLEEFEERFVKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLAAGLAKFS 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               I GI    E L   +   IE+L+ ER+   K K F+ +D IR +L+ +G ILED  
Sbjct: 405 EWLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILED-- 459

Query: 447 NPDNGQRMTRWKQK 460
            P      TRW+++
Sbjct: 460 TPQG----TRWRRE 469


>gi|325126288|gb|ADY85618.1| Cys-tRNA synthetase cycrs [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 474

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 178/496 (35%), Positives = 268/496 (54%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEAGAEGTTVPE------LAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PAVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----N 386
           P +            +A+ +D N  +A+ A+++        A     + + L +F     
Sbjct: 345 PNLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K    +  +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
              P    + TRW ++
Sbjct: 465 --TP----QGTRWSRE 474


>gi|257064638|ref|YP_003144310.1| cysteinyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256792291|gb|ACV22961.1| cysteinyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 498

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 149/338 (44%), Positives = 202/338 (59%), Gaps = 22/338 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T   +  +F       I MYVCGPTVY++ HIGNAR  I FD++ R L +   + 
Sbjct: 2   IRLYDTQAHQKLDFVPNQEGVIHMYVCGPTVYNYIHIGNARTFISFDIIRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII++A +E  S       + + ++ T  F++D   +  L P  +P+
Sbjct: 61  -VTFVQNVTDVDDKIIKKANEEGRSA------AEVATEYTDAFIEDMRAMGVLDPDVRPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
           AT  I  MI L+  +I  GHAYE   ++ F   S P YG  S R IDE + G R      
Sbjct: 114 ATEEIDSMIELVSTLIERGHAYEVEGDVYFSVRSFPEYGKLSHRNIDELEGGHRELRADG 173

Query: 182 ---KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              +  K++P DF +WK + P EP W SPWG GRPGWHIECSAMS  YLG   DIHGGG 
Sbjct: 174 QGLEDRKRDPLDFAVWKAAKPGEPSWPSPWGEGRPGWHIECSAMSRKYLGLPLDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A  +   +N W+H G LN+ G KMSKS GNF+ + ++L+T +  
Sbjct: 234 DLAFPHHENEIAQSEAAYGV-AFSNHWMHGGMLNINGEKMSKSLGNFLLLRDILKTVE-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
                  V+R+ M   HYR P+DF  +R+ EA   L +
Sbjct: 291 -----PSVLRMFMARAHYRSPLDFNEERVAEAAASLER 323


>gi|256823180|ref|YP_003147143.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796719|gb|ACV27375.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 465

 Score =  292 bits (747), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 177/491 (36%), Positives = 253/491 (51%), Gaps = 62/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN L R+   F+ ++   + MYVCG T YD  HIG+AR    FDV+ R L++   + 
Sbjct: 2   LQIYNNLTRQKEPFKPMEEGKVSMYVCGVTTYDLCHIGHARTYAAFDVINRFLKFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        +  S +T +  Q+  +D   +    P  +PR
Sbjct: 61  -VTYVRNITDIDDKIINRANEN------GEDFSELTERFIQEMYQDFDAIGLQRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I + Q +I  G AY  +N ++ F   +  +YG  S++ + +   G RV    
Sbjct: 114 ATQTMDEIIQMTQTLIEKGAAYATDNGDVYFHVPAFKDYGKLSKQDLTQLNAGERVDVND 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS   LG  FDIHGGG DL FP
Sbjct: 174 IKKDPMDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAMSKKCLGDTFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA+     A +WIH G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSECANDC-TFARVWIHTGMVQVDKEKMSKSLGNFFTIRDVL-------KQYR 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVL- 352
              +R  ++  HYR  + +T   L  A+  L +             T    GI++ A L 
Sbjct: 286 PESVRYFLMSGHYRSQLSYTQANLESADASLERLYTSLRGVDFNRATDDKLGILEQAQLR 345

Query: 353 --SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI--- 407
              A+ +D N   A+  L  LA+E  +   L     A+A  + +++  + L   +S+   
Sbjct: 346 FTEAMDDDFNVPEAMPVLFDLAKEVNR---LKATDMATAATIAVKI--KELAGVLSLLQQ 400

Query: 408 ------------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                              I+ L+Q+RL     K +  AD IR +L +    LED     
Sbjct: 401 DPESFLKSGAGDSDVSDEDIDSLIQQRLQARADKNWDLADEIRDKLHAMNIELEDAAGG- 459

Query: 450 NGQRMTRWKQK 460
                T W++K
Sbjct: 460 -----TSWRRK 465


>gi|311029027|ref|ZP_07707117.1| cysteinyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 466

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 172/485 (35%), Positives = 257/485 (52%), Gaps = 52/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+  +F  ++   ++MYVCGPTVY++ HIGNARP IVFD + R L Y   E 
Sbjct: 3   IHLYNTLTRQKEKFVPLEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEYRGFE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A++    +P       I  +    + +D + L C   T  PR
Sbjct: 62  -VNYVSNFTDVDDKLIKAAKELGEDVPT------IAERFIAAYHEDVSALGCKQATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ +I  G+AYE++ ++ + T     YG  S + I++ ++GTR+     
Sbjct: 115 VTESMDIIIEFIEALIEKGYAYESDGDVYYRTREFKEYGKLSHQPIEDLQLGTRIEVGDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF+LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDALDFVLWKAAKEGEIHWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDP----- 349
            ++R  ML  HYR PI++           ++R+  A   L      +      D      
Sbjct: 287 QLLRFFMLSVHYRHPINYNEELLQSTNNGLERIRTAYANLKHRLDNTVDLATDDTEWVQK 346

Query: 350 ------AVLSALYNDLNTVSAIQALHKLARES-------TKNHDLLPIFNASAHILG--I 394
                   +  + +D NT +AI  L  +A+++         +  +L  F A    L   I
Sbjct: 347 VEEFKNEFIKVMDDDFNTANAISVLFDMAKQANLYLNGKNTSEKVLKAFIAQFEELFSVI 406

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            V      + +   IE L+Q+R+   K + F+ AD IR +L++K  ILED        + 
Sbjct: 407 GVSLTAEEELLDEEIESLIQQRIDARKNRDFARADEIRDELKAKNIILED------TAQG 460

Query: 455 TRWKQ 459
           TRWK+
Sbjct: 461 TRWKR 465


>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 482

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/500 (35%), Positives = 249/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++  G
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHV-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYV+N TD+DDKII  +  E  S         I ++    + +    L        
Sbjct: 61  YK-VTYVQNFTDVDDKIINTSNGEGVSW------DTIANRYIDSYFEVMDALGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +IQ +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIEDIITMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---- 350
               +R  +L THYR P+DF+ +RL EA   L +                G  D A    
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGACDEAQRLL 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------------IF 385
                      +A+ +D NT  A  ++  LA+E    +  +                 IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILGI-EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G+ E   E      +   E+L+Q     R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED  +P       RWK++
Sbjct: 467 TIED--SPQGA----RWKKR 480


>gi|227555727|ref|ZP_03985774.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175132|gb|EEI56104.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315573949|gb|EFU86140.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581900|gb|EFU94091.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 478

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 260/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|159029961|emb|CAO90340.1| cysS [Microcystis aeruginosa PCC 7806]
          Length = 480

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 178/486 (36%), Positives = 260/486 (53%), Gaps = 71/486 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R+   F  + P  + MY CG TVYD+ H+G+AR  +V+DV+ R L Y  G K V
Sbjct: 5   LYNTLSRREEPFTPLIPGIVSMYCCGITVYDYCHLGHARTCVVWDVVRRYLEYL-GYK-V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++N TDIDDKI+ RA+ EH ++      + +  K  Q + +D  +L        PRAT
Sbjct: 63  RYIQNFTDIDDKILNRAKNEHTTM------AAVAEKFIQAYFEDMAKLGVRPADAYPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG------TRVP 180
           + +  +  L+  +   G+AY ++ ++ +      +YG  S RK+D+ + G      T  P
Sbjct: 117 HTLDGIKRLVYELEQKGYAYPSDGDVYYSVRRFSDYGKLSGRKLDDLQAGASGRVETDDP 176

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 177 EAIKKQDPFDFALWKGAKPGEPSWDSPWGQGRPGWHIECSAMVKEQLGETIDIHVGGSDL 236

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  A+ W+HNG + + G KMSKS GNFITI ELL        
Sbjct: 237 IFPHHENEIAQSEAATG-KPLAHYWLHNGMVKVAGEKMSKSLGNFITIRELLA------- 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--QTSTSKGI-----IDPAVLS 353
            +    +RL +L   YR+PIDF+ + L  A    + W   Q   S G       +PA+  
Sbjct: 289 KYDPLAVRLLILGAQYRKPIDFSDEGLQAA---TNGWHTLQEGLSFGYKHLPPDNPAITD 345

Query: 354 ---------ALYNDLNTVSAIQALHKLARE---------------------STKNHDLLP 383
                    A+ +D N    +  L ++A+E                     + K H L+ 
Sbjct: 346 QELENRFQEAVNHDFNFAGGLAVLFEIAKELRKEGNNLTHAGKTDSNLAQLAVKWHTLVK 405

Query: 384 IFNASAHILGIEVCKEH----LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +    + +LG+E+  +     +++ IS A IE L+Q+R    K K ++ +D IR +L+++
Sbjct: 406 L----SRVLGLEIAADQGETPVSEGISAAEIENLIQQRTEAKKAKNYAESDRIRAELKAQ 461

Query: 439 GFILED 444
           G  L D
Sbjct: 462 GITLID 467


>gi|17545886|ref|NP_519288.1| cysteinyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|21264003|sp|Q8Y077|SYC_RALSO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|17428181|emb|CAD14869.1| probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 465

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 177/469 (37%), Positives = 257/469 (54%), Gaps = 43/469 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T++      +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTNRFIAAMHEDADALGVQRPDRE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCDLLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A       N W+HNGF+ +   KMSKS GNF TI ++L+     
Sbjct: 234 DLQFPHHENEIAQSEGASG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVLKV---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPA- 350
              +   V+R  +L +HYR  ++++   L +A   L++        P  + ++   +   
Sbjct: 289 ---YDPEVVRFFILRSHYRSDLNYSDVHLDDARHALTRLYTALKDVPAEAQARPDWNEPH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEVCKEH--LNK 403
                 A+++D NT  A+  L +LA E   T++  L     A   ++G+ V   H  L  
Sbjct: 346 GKRFREAMHDDFNTPVAMAVLFELATEVNKTRSPALASQLAALGGVMGLLVRDPHAFLQG 405

Query: 404 NISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  A        +E  ++ R      + F+ AD IR  L + G +LED
Sbjct: 406 GVGAAADGLDAAEVEARIEARRAAKAARDFARADGIRADLLAAGIVLED 454


>gi|323339370|ref|ZP_08079655.1| cysteine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093193|gb|EFZ35780.1| cysteine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 470

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 177/492 (35%), Positives = 263/492 (53%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I NTL  K   F+ ++   ++MYVCGPTVY++ HIGNAR  + FD + R   Y   E 
Sbjct: 2   IQILNTLSGKKEIFKPLEEGKVKMYVCGPTVYNYIHIGNARSAVAFDTVRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+   +      +   +  +T K    F +D   L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKIIKAGHE------MKMTVKEVTDKFIAAFYEDIDALNIKRATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPE- 181
             + +  +I  IQ +I  G+AY++  ++ +      +YG  S + +D  EQ    RV + 
Sbjct: 114 VMDTMDDIIKFIQVLIDKGYAYQSEGDVYYRARKFKDYGKLSGQSVDDLEQGASERVADF 173

Query: 182 -KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF LWK + P E  WE+P+G GRPGWHIECS M++ YLGK  DIH GG DL
Sbjct: 174 DQGKKEDPLDFALWKAAKPGEIYWEAPFGNGRPGWHIECSVMATKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A+  +K  N W+HNGF+ +  E  KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQS-EAETGQKFVNYWMHNGFVTIGEEDEKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   L EA+  L K         + +    K  ++ 
Sbjct: 287 -KKVDPQVVRFFMATTQYRHPIRYSQANLAEAKTNLQKLKTAVDNLRYRKNDAEKSDVEN 345

Query: 350 AV-----------LSALYNDLNTVSAIQALHKLAR-------ESTKNHD----LLPIFNA 387
            +           + A+ +D NT + I  ++++A+       ++T + +    LL  F+ 
Sbjct: 346 EIREKFSALKNRFIEAMDDDFNTQNGIAVIYEMAKLLNVYSEKATVSLETIEYLLDGFSK 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +A + GI+  +E   + +   IE L++ER+   K + F+ +D IR  L+ KG ILED   
Sbjct: 406 AAEVFGIKFEEE--TELLDEKIEALIEERIAARKARNFAQSDEIRDMLKEKGVILED--T 461

Query: 448 PDNGQRMTRWKQ 459
           P      TRWK+
Sbjct: 462 PQG----TRWKR 469


>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254781675|sp|B8J0S2|SYC_DESDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 483

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 184/497 (37%), Positives = 244/497 (49%), Gaps = 73/497 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R+  EF  + P  + MYVCG T YD+ HIG+AR  +VFDVL R LR+   +  V
Sbjct: 3   LYNTLGRQKEEFTPLRPGKVHMYVCGITAYDYCHIGHARSALVFDVLVRQLRHMGLD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRN TD+DDKII RA +E            +       F +D  RL       +PRAT
Sbjct: 61  TFVRNFTDVDDKIINRANKEGLDW------REVAQTYINAFYEDMDRLGVQRADVEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           +HI ++  L   ++  G AY   + ++ F   S P YG  S R +DE   G RV     K
Sbjct: 115 DHIQEIQDLCAKLVAEGKAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP WESPWG GRPGWHIECSAMS  YL    DIHGGG DL+FPHH
Sbjct: 175 EDPLDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSESYL--PLDIHGGGQDLVFPHH 232

Query: 246 ENEIAQ--SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           ENEIAQ  + C   +   A  W+HNGF+ +   KMSKS GNF TI ++LE       S+ 
Sbjct: 233 ENEIAQTEAVCHCHL---ARYWVHNGFVQVNAEKMSKSLGNFKTIRDILE-------SYL 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGII 347
              +R  +L  HYR PIDFT + + EAE  L                 KW ++     + 
Sbjct: 283 PETLRFFLLGKHYRSPIDFTAEGMDEAEKALHRVYTALLETQKALTREKWKKSPLPAQLT 342

Query: 348 D------PAVLSALYNDLNTVSAIQAL------------HKLARESTKNHDLLPIFNASA 389
           +       A+  A+ +DLNT  A+  +             K  R +    DLL  F A A
Sbjct: 343 EDWAAQAEALDEAMNDDLNTAQALGHIFTQVRLVNRLLEDKTLRAAEAGRDLLQDFLARA 402

Query: 390 HILGIEVCKEHLNKNISIA----------------IEKLVQERLILLKMKKFSSADYIRK 433
                 +          +A                +E L+QER      K F+ +D +R+
Sbjct: 403 EQWNTRLGLFGQQPEAFLADLRRIRAARRNIDIPRVEALLQERQEARANKDFARSDALRQ 462

Query: 434 QLESKGFILEDYKNPDN 450
            L   G  ++D     N
Sbjct: 463 ALLDLGVSVQDTPEGQN 479


>gi|161528475|ref|YP_001582301.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339776|gb|ABX12863.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 462

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 177/456 (38%), Positives = 249/456 (54%), Gaps = 48/456 (10%)

Query: 19  QAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           Q +D S  +++Y+CG TVYD +HIG+AR +IVFDVL R L     E  + +++N TD+DD
Sbjct: 12  QELDTSKKVKIYLCGVTVYDESHIGHARTIIVFDVLRRYLEDKGIE--IEFIQNFTDVDD 69

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KII RA+ E      N +   I++K  + + KD   L     T+ P+AT HI  +I  I+
Sbjct: 70  KIINRAQAE------NTSAEAISTKYIENYFKDFDGLNVKHATNYPKATEHIEDIIKFIE 123

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            +I    AY + N + F  S  P YG  S++KIDE + G R+     K NP DF +WK S
Sbjct: 124 KLIEKEIAYVSKNGVYFAVSKFPEYGKLSKKKIDELESGARIEVDEAKNNPLDFAVWKFS 183

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             +EP W+SPWG+GRPGWHIECSAMS+ YLG+ FDIHGGG DLIFPHHENEIAQS     
Sbjct: 184 -DVEPLWDSPWGKGRPGWHIECSAMSTKYLGENFDIHGGGRDLIFPHHENEIAQSESFTG 242

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
             + A IW+H G + ++G KMSKS GN  +I  +LE       +W   +IRL  L  HY 
Sbjct: 243 -NQFAKIWMHVGMVTIDGEKMSKSIGNIKSIKHVLE-------NWGPNIIRLFCLSGHYS 294

Query: 318 EPIDFTVQRLTEAEILLSKWPQTST--------------SKGIIDPAVLS----ALYNDL 359
           +PID++ + L E    L+KW Q  T                G I   + S    AL +D+
Sbjct: 295 KPIDYSEELLKEN---LTKWRQAETCYYELIHANSENSEKVGSIVEKLGSEFDKALEDDV 351

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK---------EHLNKNISIAIE 410
           NT  A+ A  +L +E+ +      +    A I+  E  +           + + +   I+
Sbjct: 352 NTHLALSAFFQLVKEANRLAAEEKLGKEDAKIIKTEFLRMLKILGLNIPEMTEGMKQEID 411

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +++ R    + K+F  AD IR +L      L D+K
Sbjct: 412 TMIENREKFRQEKQFQEADQIRDKLNEMNIELIDHK 447


>gi|229547086|ref|ZP_04435811.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|312952479|ref|ZP_07771347.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229307815|gb|EEN73802.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|310629575|gb|EFQ12858.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315153507|gb|EFT97523.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155078|gb|EFT99094.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158521|gb|EFU02538.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 478

 Score =  291 bits (746), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 260/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VADRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|228970278|ref|ZP_04130937.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228789387|gb|EEM37307.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 440

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 170/464 (36%), Positives = 244/464 (52%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +P       I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 59  EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWP--------QTSTSKGIID-------------PAVLSALYNDLNTVSAIQ 366
                 L +          +  +S  + D              A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTK----NHDLLPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +     H    +  A          ILG+E+ +E L   +   IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKDRNIILED------TAQGTRWKR 439


>gi|171320751|ref|ZP_02909762.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171094016|gb|EDT39118.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 465

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 175/472 (37%), Positives = 250/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA +        + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRALEN------GETIKSLTDRFIGAMHEDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQAGDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D+NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHAQRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQGTGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454


>gi|307268962|ref|ZP_07550326.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307287137|ref|ZP_07567208.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306501735|gb|EFM71026.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306514770|gb|EFM83321.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315033512|gb|EFT45444.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036335|gb|EFT48267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315165683|gb|EFU09700.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|329576209|gb|EGG57727.1| cysteine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 478

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 260/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VADRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|126696668|ref|YP_001091554.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|187629842|sp|A3PDX8|SYC_PROM0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126543711|gb|ABO17953.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 489

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 197/509 (38%), Positives = 267/509 (52%), Gaps = 80/509 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL ++I  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRIEVFKPIDDV-VKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E  SI + +    ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEE--SISMKE----VSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---KMGTRVPE 181
           ATNHI  +  LI  +   G+AY  + ++ +      NYG  S + I+EQ   + G    E
Sbjct: 113 ATNHICNICDLITILEDKGYAYSRDGDVYYSVFKNQNYGKLSNQNIEEQNINQQGRMANE 172

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  KK NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+        
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELI-------N 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDP--- 349
           S  +P+ +R  ++  +YR+P+DFT + L  A        + LS    T  S   ID    
Sbjct: 285 SGISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINVALSFMDLTKGSLNSIDKNEP 344

Query: 350 ------------------AVLSALYNDLNTVSAIQALHKLAR-----------------E 374
                                 AL NDLNT SAI  ++ LA+                 +
Sbjct: 345 IEEEYKEKISFELSQKKLKFSEALGNDLNTASAIAIIYDLAKPLKNFLNQFQRVEGFKID 404

Query: 375 STKNHDLLPIFNA---SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSA 428
             +   LL  F        +LG++  KE L K   I    I  L+ ERL   K K ++ A
Sbjct: 405 QNEKFFLLENFKTLEKLTEVLGLK--KEVLVKESKITEEEISTLINERLKAKKEKNYAKA 462

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           D IR  L+ KG  L      D  + +T W
Sbjct: 463 DEIRSLLKEKGIEL-----IDQSKEITTW 486


>gi|227888795|ref|ZP_04006600.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850632|gb|EEJ60718.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 472

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 172/480 (35%), Positives = 256/480 (53%), Gaps = 60/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +EH ++        +  +  + F++DT  L     T  PR
Sbjct: 62  -VNYVSNFTDVDDKMINEAHKEHTTV------EKLAERYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 175 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A    K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQS-EAKTGRKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------QTSTS 343
             +     V+R  M    YR PI+++   L +AE +L ++               +T   
Sbjct: 289 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETLED 346

Query: 344 KGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------PI 384
            G+ D         + A+ +D N  +A+  ++ LA  +T N+ L               +
Sbjct: 347 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLA--TTLNNHLQKDQVDKPALKRAKKL 404

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             A   I G+   +E    +    IEKL+ +R    K K ++ +D +R +L++KG ++ED
Sbjct: 405 LIAWLEIFGVSFNEEQAENDDE--IEKLIAQRDEARKNKDWAESDRLRAELQAKGIVIED 462


>gi|205372089|ref|ZP_03224906.1| cysteinyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 467

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 170/489 (34%), Positives = 252/489 (51%), Gaps = 60/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D + R L Y     
Sbjct: 3   IQLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRRYLEYR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +    +P       I  +    + +DT  L C      PR
Sbjct: 61  AVNFVSNFTDVDDKLIKAANELGEDVPT------IAERFIDAYFEDTAALGCSKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  I  ++  G+AYE+  ++ + T     YG  S + I++ + G R+     
Sbjct: 115 VTENIDIIIEFISALMDKGYAYESQGDVYYRTKKFEGYGKLSHQPIEDLQSGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  W SP+G+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKAAKEGEIYWSSPFGKGRPGWHIECSAMVRKYLGDTIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KPFAKYWMHNGYINIDNEKMSKSLGNFVLVHDII-------KETDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQ------------RLTEAEILLSKWPQTSTSKGI------ 346
            V+R  ML  HYR PI+++              R T   I   K    +  +G       
Sbjct: 287 QVLRFFMLSVHYRHPINYSADLVENTKTALDRLRTTYQNITYRKESSVNLGEGTEKWVGQ 346

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------IFNASAH 390
              +    + A+ +D NT +AI  L  L+++   N+ L+               F     
Sbjct: 347 IAELKKQFIQAMDDDFNTANAISVLFDLSKQG--NYYLMEENTEVRVLDEFTQTFEELFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+++  E   + +   IEKL++ER+   K   F  +D IR +L+    +LED   P  
Sbjct: 405 VLGLKLSGEA--ELLDEEIEKLIEERIQARKNCDFKRSDEIRDKLKEMNIVLED--TPQG 460

Query: 451 GQRMTRWKQ 459
               TRWK+
Sbjct: 461 ----TRWKR 465


>gi|239930483|ref|ZP_04687436.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438844|ref|ZP_06578234.1| cysteinyl-tRNA synthetase 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291341739|gb|EFE68695.1| cysteinyl-tRNA synthetase 1 [Streptomyces ghanaensis ATCC 14672]
          Length = 466

 Score =  291 bits (745), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 164/473 (34%), Positives = 252/473 (53%), Gaps = 54/473 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   E 
Sbjct: 3   IRLYDTSARQIRDFIPLRPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGLE- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFIRNVTDIDDKIIAKSAEQGRPWWSIG-------YENERAFTDGYHALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +M+ +++ +I  GHAYEA+  + F  +S P+Y   S +++ E  +      + 
Sbjct: 114 RATGHITEMVEMMRGLIERGHAYEADGNVYFAVTSFPDYLKLSNQEL-ENLLQPSGEGET 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG VFDIHGGGLDL+FP
Sbjct: 173 GKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGTVFDIHGGGLDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + + E++       + W 
Sbjct: 233 HHENEIAQAKAYG--DEFARYWVHNAWVTMSGEKMSKSLGNSVLVGEMV-------KRWR 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------------ILLSKWPQTSTSKGIIDPA 350
             V+R  +   HYR  I+++ + L EAE             + L+  P   +++  + PA
Sbjct: 284 PIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRTVELAGGPVEPSAE--VPPA 341

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH- 400
              A+ +DL    A+  +H   R+                L    A   +LG++    H 
Sbjct: 342 FAEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHW 401

Query: 401 ---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    L+  +   +  ++ +R      K +++AD IR +L   G ++ED
Sbjct: 402 AGEGDRGEDLHGVVDSLVRLVLDQREAARARKDWATADAIRDRLGQAGLVIED 454


>gi|307284103|ref|ZP_07564273.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306503474|gb|EFM72723.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|315026628|gb|EFT38560.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 478

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 260/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|307276290|ref|ZP_07557417.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306507033|gb|EFM76176.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315149012|gb|EFT93028.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315168265|gb|EFU12282.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 478

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 260/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VADRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|325567615|ref|ZP_08144282.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325159048|gb|EGC71194.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 470

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 256/494 (51%), Gaps = 64/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   FQ ++   ++MYVCGPTVY++ HIGN R  + FD + R   Y     
Sbjct: 2   IKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++   + P       +  +    F +DT  L     T  PR
Sbjct: 60  TVDYLMNFTDVDDKIIRAAKELGTTAPE------VAERFINAFNEDTAALNVKPATMNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
             +HI  +I  I  ++  G+AY  N ++ + T    +YG  S + IDE ++G   R  E+
Sbjct: 114 VMDHIEDIIAFIAALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRTGEE 173

Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  WESPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           FPHHENEIAQS    +  KT AN W+HNG++ +  +  KMSKS GNF+T++E++      
Sbjct: 234 FPHHENEIAQSEA--KTGKTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKG 345
            +     V+R  +  T YR PI ++   L EA+  L K   T               S  
Sbjct: 286 -KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDE 344

Query: 346 IIDPAVLS--------ALYNDLNTVSAIQALHKLAR-----ESTKNHDL------LPIFN 386
            ++  VL          + +D N  + I  +++LA+           DL      L  F+
Sbjct: 345 EVNAPVLEEFEERFIKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLTAGLAKFS 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               I GI    E L   +   IE+L+ ER+   K K F+ +D IR +L+ +G ILED  
Sbjct: 405 EWLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILED-- 459

Query: 447 NPDNGQRMTRWKQK 460
            P      TRW+++
Sbjct: 460 TPQG----TRWRRE 469


>gi|116514575|ref|YP_813481.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122274693|sp|Q048S9|SYC_LACDB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116093890|gb|ABJ59043.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 474

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 178/496 (35%), Positives = 267/496 (53%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEAGAEGTTVPE------LAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T+ ++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVYDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PAVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----N 386
           P +            +A+ +D N  +A+ A+++        A     + + L +F     
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K    +  +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
              P    + TRW ++
Sbjct: 465 --TP----QGTRWSRE 474


>gi|293382260|ref|ZP_06628200.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
 gi|293386691|ref|ZP_06631264.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
 gi|312908762|ref|ZP_07767701.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312979222|ref|ZP_07790926.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291080374|gb|EFE17738.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083860|gb|EFE20823.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
 gi|310625200|gb|EFQ08483.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311287987|gb|EFQ66543.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 478

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 260/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|332685571|ref|YP_004455345.1| cysteinyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369580|dbj|BAK20536.1| cysteinyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 469

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 180/492 (36%), Positives = 249/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL RK   F  I+ + +RMYVCGPTVY++ HIGNAR  I FD + R L Y     
Sbjct: 2   ITIYNTLTRKKEPFIPIEENKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TDIDDKII  A++      +      ++S+    F +D+  L     T  PR
Sbjct: 60  TVNYVSNFTDIDDKIIRAAKE------MKITAEAVSSRFIHAFEEDSNALNIQPATCHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
              HIP ++  IQ +I  G+AYEA  ++ + T     YG  S + ID+ ++G       E
Sbjct: 114 VMTHIPDILAFIQQLIEKGYAYEAQGDVYYRTYKFKQYGELSHQSIDDLEIGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG GRPGWHIECS M+  +LG+  DIHGGG DL 
Sbjct: 174 RSLKEDPLDFALWKKAKPGEISWDSPWGAGRPGWHIECSVMAMKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A   +   N W+HNG++ +     KMSKS GNF+T++EL++T     
Sbjct: 234 FPHHENEIAQS-EAQSGKTFVNYWMHNGYVTVGENDEKMSKSLGNFVTVHELIQTID--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------- 342
                 V+R  M  T YR PI ++   + EA   L +                       
Sbjct: 290 ----PQVLRFFMSTTQYRHPIHYSQTTIKEAASNLKRLQNAFNNLTFRKNDTLEQLTEDE 345

Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLA--------RESTKN---HDLLPIFNA 387
               +  +     + A+ +D NT + I  +++LA        R++         L  F  
Sbjct: 346 NDLETLNLFKGQFIQAMDDDFNTANGITIVYELAKWMNLYSERKAVSKKVIEKTLTYFTQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   I   I++L+ ER    K   F  +D IR  L  +G +LED K 
Sbjct: 406 WLAIFGIFFSSEVL---IDQDIDQLINEREQARKEGNFGRSDEIRDLLNQQGIVLEDTK- 461

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 462 -----QGTRWRR 468


>gi|218245339|ref|YP_002370710.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226735051|sp|B7JUH4|SYC_CYAP8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218165817|gb|ACK64554.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 484

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 171/487 (35%), Positives = 260/487 (53%), Gaps = 63/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+    + ++   IRMY CG TVYD+ H+G+AR  +V+DV+ R L++   E 
Sbjct: 3   LTVYNTLTRRKEPLETLETGKIRMYCCGITVYDYCHLGHARTCMVWDVVRRYLQWRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RARQE  ++        ++ +  + + +D   L        PR
Sbjct: 62  -VQYIQNFTDIDDKILNRARQEGTTM------EAVSDRFIEAYFEDMEHLHVQKADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  L+  +   G+AY++N ++ +      +YG  S RK+++ + G   RV   
Sbjct: 115 ATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRKLEDLQAGASGRVEVQ 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KK+P DF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DPEAAKKKDPFDFAVWKAAKPGEPSWDSPWGQGRPGWHIECSAMVRERLGETIDIHVGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   +  A  W+HNG + +EG KMSKS GNFITI +LL+     
Sbjct: 235 DLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVEGEKMSKSLGNFITIRDLLDKVD-- 291

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------------------EILLSKWPQ 339
                   +RL +L  HYR+P+DFT + L  A                   ++  +  P 
Sbjct: 292 -----PMAMRLFILQAHYRKPVDFTDEALEAATNGWHTLKEGLLFGYNHGKQLNFTASPP 346

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------- 388
              +   +      A+ +D N    +  L ++A+E  K  ++L     +           
Sbjct: 347 HPLTSSPLTQRFQQAVDDDFNFAGGLAILFEIAKELRKEGNILVHQGQTETSPQVLEEQW 406

Query: 389 ------AHILGIEV----CKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLES 437
                 A +LG+E      +E +   +S A IE+L+++R I  + K ++  D +R +L++
Sbjct: 407 RTLVELAGVLGLETDISEVQEAVGNGLSDAEIEELIEQRKIARQNKNYAEGDRLRDELKN 466

Query: 438 KGFILED 444
           +G IL D
Sbjct: 467 QGIILVD 473


>gi|229003104|ref|ZP_04160954.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758150|gb|EEM07345.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 440

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 170/464 (36%), Positives = 246/464 (53%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +P       I  +  + + +D T L C   T  PR T ++  +I  I+ ++  G+AYE
Sbjct: 59  EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ + T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---- 323
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+    
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELL 284

Query: 324 ------VQRLTEAEILLSKWPQTSTS-----------KGIIDPAVLSALYNDLNTVSAIQ 366
                 ++R+  A   L    ++ST                  A  +A+ +D NT +A+ 
Sbjct: 285 QNTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMKKFQVAFEAAMDDDFNTANAVT 344

Query: 367 ALHKLARESTK----NHDLLPIFNASAH-------ILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ LA  + +     H    +  A          ILG+E+ KE L   +   IE L+Q+
Sbjct: 345 ELYNLANHANQYLLEEHTSKAVLEAYVKQFETLFGILGLELTKEEL---LDEEIEVLIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILED------TAQGTRWKR 439


>gi|313904851|ref|ZP_07838223.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470284|gb|EFR65614.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 496

 Score =  291 bits (745), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 183/504 (36%), Positives = 257/504 (50%), Gaps = 80/504 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNT+ + I EF+ I    + MYVCGPTVY+  HIGNARPMIVFD   R + Y  G +
Sbjct: 3   LRFYNTMTKSIQEFKPIREGEVSMYVCGPTVYNLIHIGNARPMIVFDTARRYMEYK-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  +        +I+ +  ++ +KD   +  L  T  P 
Sbjct: 62  -VNYVSNFTDVDDKIIKKANEEGVTS------EVISQRYIKETMKDMADMNVLPATTHPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI LI+++   G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 115 ATEEIGGMIELIRDLQEKGYAYEVNGTVYFRTRKDEKYGKLSHKNLDDLRSGFRDLKVSG 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDL 240
           +  K++P DF+LWK   P EP WESPWG+GRPGWH EC  MS  YL     DIH GG DL
Sbjct: 175 EDQKEDPLDFVLWKPKKPGEPFWESPWGQGRPGWHTECCVMSRKYLHSTTIDIHAGGEDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  C+   E+ A+ W+HN FLN++  KMSKS GNF T+ E+       G 
Sbjct: 235 IFPHHENEIAQVECSTG-EEFAHYWLHNAFLNIDNVKMSKSLGNFRTVREI-------GD 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTST--- 342
            +   ++R  ML  HYR  ++F+ + +  A+  L +                 Q  T   
Sbjct: 287 HYDLQILRFFMLSAHYRRVLNFSTESMEAAKASLGRIRTAVKTLGDRAKAAAAQDLTDHE 346

Query: 343 -------SKGIIDP---------AVL--------------SALYNDLNTVSAIQALHKLA 372
                  +KG + P          VL               A+ +DLNT  A  A+  L 
Sbjct: 347 RTRLGIDAKGEVIPFEVTADSVTGVLVKPDDMRAFRYDFEQAMDDDLNTADAEAAIFNLV 406

Query: 373 R----ESTKNHDLLPIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKM 422
           R    E  +N      F  +     +E+C       +   +++   IE+L+ +R    K 
Sbjct: 407 RFANIEVQENSS--KAFAEAVKTEIMELCGILGLIVDVKEEDLDAEIEELIAKRQAARKA 464

Query: 423 KKFSSADYIRKQLESKGFILEDYK 446
           K F+ AD IR +L +KG  L+D +
Sbjct: 465 KDFAMADAIRDELLAKGIALKDTR 488


>gi|221214717|ref|ZP_03587686.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165256|gb|EED97733.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 465

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 166/398 (41%), Positives = 231/398 (58%), Gaps = 38/398 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARE--STKNHDL 381
                  +A+ +D NT  AI  L +LA E   T+N  L
Sbjct: 343 PHAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRNASL 380


>gi|229159263|ref|ZP_04287287.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624155|gb|EEK80957.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 440

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 170/464 (36%), Positives = 244/464 (52%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +P       I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 59  EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWP--------QTSTSKGIID-------------PAVLSALYNDLNTVSAIQ 366
                 L +          +  +S  + D              A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAIT 344

Query: 367 ALHKLARESTK----NHDLLPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +     H    +  A          ILG+E+ +E L   +   IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKIVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILED------TAQGTRWKR 439


>gi|182414301|ref|YP_001819367.1| cysteinyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|254781688|sp|B1ZSX8|SYC_OPITP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|177841515|gb|ACB75767.1| cysteinyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 457

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 170/460 (36%), Positives = 262/460 (56%), Gaps = 31/460 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K++++L R + E Q   P  + R Y CGPTVY  AHIGN R  +V D+L R+L   +G 
Sbjct: 3   LKLFDSLTRNLRELQPSHPDGVFRFYNCGPTVYAPAHIGNFRTFVVNDILRRMLELEFGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN+TD+DDK I+RAR E    P+ D    +T + T +F  D   L CL P  +P
Sbjct: 63  PKVKHVRNLTDVDDKTIKRARDE--GRPLAD----VTRQWTDKFHADCAALNCLPPHIEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
            AT HI + + +I  ++  G+AY A +  + F  SS  +YG  SR K  E ++G+ +  K
Sbjct: 117 TATGHIREQVDMIDCLMQKGNAYRAADGSVYFKVSSFSDYGRLSRVKERELQIGSALAGK 176

Query: 183 YH------KKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                   K++ +DF LWK   P   E  W+SPWGRGRPGWHIECSAMS  +LG+  D+H
Sbjct: 177 SQAVDADEKEDGSDFALWKAHKPDDGENSWDSPWGRGRPGWHIECSAMSKKHLGETIDLH 236

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+DL+FPHHENEIAQS C + ++ + + W H+  L ++G+KMSKS GN  T+++L + 
Sbjct: 237 TGGVDLLFPHHENEIAQSECCNGVQFSRH-WYHSEHLLVDGKKMSKSLGNLYTLDDLKQ- 294

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---KWPQTSTSKGI---ID 348
                + +    +R A+L  H R+ ++FT+  L  AE  L+    +  T  + G    + 
Sbjct: 295 -----KGFSPMAVRYALLSGHPRKQLNFTLDSLHAAEKALATLRAYRATLAAGGAAHHVF 349

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK-NISI 407
             V++AL +DLNT +A+ AL  +        D +  F+     LG+++      K  +  
Sbjct: 350 APVIAALEDDLNTPAALGALFTIVNRGKGEAD-VESFDRVMFALGLKLDAPTAPKAEVPA 408

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +  L ++R    + K F++AD +RK++ + G+ + D K+
Sbjct: 409 EVTALAEKRWAAKQAKDFATADALRKEIAAAGWSMLDRKD 448


>gi|170079458|ref|YP_001736096.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|229558794|sp|B1XND1|SYC_SYNP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169887127|gb|ACB00841.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 472

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 179/475 (37%), Positives = 248/475 (52%), Gaps = 51/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ ++ + +RMY CG TVYD+ H+G+AR  +++DV+ R L++   E 
Sbjct: 3   LSLYNTLHRRSEPFEPLEANLVRMYCCGITVYDYCHLGHARTCLIWDVVRRYLQWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RAR E  S+        I  K  + + +D   L        PR
Sbjct: 62  -VHYIQNFTDIDDKILNRARAEKSSM------GAIAEKFIEAYFEDMEALHIQPADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  LI ++   G AY +  ++ +       YG  S RK+D+ + G   RV   
Sbjct: 115 ATHSLDGIQKLIHDLEQRGFAYASQGDVYYAVRKFDGYGKLSGRKLDDMQAGASGRVNED 174

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P+   K +P DF LWK +   EP W+SPWG GRPGWHIECSAM    LG+  DIH GG D
Sbjct: 175 PDAPKKHDPFDFALWKAAKAGEPAWDSPWGAGRPGWHIECSAMVRDRLGETIDIHVGGSD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +  A  W+HNG + +EG KMSKS GNFITI ELL       
Sbjct: 235 LIFPHHENEIAQSEAATG-QPLAKYWLHNGMVKVEGEKMSKSLGNFITIRELL------- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWPQTSTSKGIIDPAV 351
           + +    +RL +L  HY +P+DFT + LT A        + LL       T+    D  +
Sbjct: 287 KKYDPMAVRLFILQAHYTKPLDFTDEALTAATKGWETLNDALLFGAEHLDTNNITADKGI 346

Query: 352 LSALY----NDLNTVSAIQALHKLARESTKNHDLL---------PIFNAS--------AH 390
           L+       NDLN    +  L +LA+E  K  ++L         P   AS        A 
Sbjct: 347 LAKFKAIVDNDLNFSGGLAILFELAKELKKEKNILVHEGKLQQNPQILASLWLTLKELAD 406

Query: 391 ILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ILG +   K+         IE L+Q+R      K ++  D +R  L  KG +L D
Sbjct: 407 ILGFVPETKQQAAGLTDAEIEDLIQQRKDARANKNYAEGDRLRDLLAEKGIVLVD 461


>gi|28212192|ref|NP_783136.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
 gi|61216342|sp|Q890M4|SYC_CLOTE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28204636|gb|AAO37073.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
          Length = 465

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 173/474 (36%), Positives = 244/474 (51%), Gaps = 53/474 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  +    + MYVCGPTVY+F HIGN R  IVFD + R L Y  G K
Sbjct: 1   MKLYNTLTRQKEEFIPLKTGEVNMYVCGPTVYNFFHIGNGRTFIVFDTVRRYLEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA  E  ++        +  +   ++ KD   L     T  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKRANDEGITV------KELGERFIGEYYKDADSLNIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 113 ATEFMEEIIQFVKELVDKGYAYEIDGDVYFHTKRFNEYGKLSGQNIEDLQAGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+  DF +WK+  P EP WESPWG GRPGWHIECS M+ + LG   DIH GG DLIFPH
Sbjct: 173 KKDAMDFAIWKKQKPGEPAWESPWGMGRPGWHIECSCMAHNLLGDTIDIHAGGHDLIFPH 232

Query: 245 HENEIAQSCCADRIEK-TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS C  R  K  A  W+H+ FLN++ +KMSKS  NF T  E+LE        + 
Sbjct: 233 HENEIAQSEC--RTGKPFAKYWMHSAFLNIDNKKMSKSLNNFFTAREILE-------KYD 283

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPA--- 350
           A V+RL ML  HYR  ++F+          V+RL  A   L           + +     
Sbjct: 284 ADVVRLFMLSAHYRAQLNFSEELLQSAMSAVERLYNAIYNLENLANEVKRNDLNEEEKKY 343

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
                      +  + +D NT  AI  +  + R+   N             L I      
Sbjct: 344 IKKLDEYREKYIEKMDDDFNTADAIAVIFDMIRDINSNVKSDSSKKIIEYALSIIRELGS 403

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            LGI   ++   +++   I++L+  R      K ++ AD IR  L+ +G +LED
Sbjct: 404 PLGI--LQKSTEESVEDEIQQLIDRREKARTEKNWALADEIRDGLKERGILLED 455


>gi|225871262|ref|YP_002747209.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700666|emb|CAW95246.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 447

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 170/459 (37%), Positives = 243/459 (52%), Gaps = 38/459 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY--AGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++   S P   A   I +     F++DT  L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAKESGVS-PKELADRFIAA-----FMEDTKALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  I  +I  G+AYE+  +I F  +   NY   + + I + + G       E
Sbjct: 114 VMDYMDEIIAFIAALIKKGYAYESAGDIYFRVAKASNYARLANKTIADLEAGASGRTDTE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W SPW  GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKEDPLDFALWKSAKLGEISWASPWSAGRPGWHIECSVMATELLGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T+++LL+T      
Sbjct: 234 FPHHTNEIAQSEA--KTSKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVL-- 352
                 +R  +   HYR+PI+FT + + +A + L       + P  +T+      A +  
Sbjct: 288 ---GQTLRFFLATQHYRKPINFTEKAIHDAGVNLKYLKNTLQQPTVATADASQLAAFITA 344

Query: 353 --SALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + I  L  +A+       +  +   F     + GI    E L+     
Sbjct: 345 FKAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAESLDTE--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            IE+L+ ER      + F+ AD IR QL ++G  L D K
Sbjct: 402 -IEQLIAERQEARANRDFARADAIRDQLAAQGIKLLDTK 439


>gi|307154328|ref|YP_003889712.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306984556|gb|ADN16437.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 480

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 180/497 (36%), Positives = 258/497 (51%), Gaps = 65/497 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   FQ I+P  +RMY CG TVYD+ H+G+AR  +V+DV+ R L++   + 
Sbjct: 3   LTIYNTLTRRKEPFQPIEPGKVRMYCCGITVYDYCHLGHARTCVVWDVVRRYLQWRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RA++E  S+        ++ +  + + +D  RL        PR
Sbjct: 62  -VKYIQNFTDIDDKILNRAKKEGTSM------EEVSERFIKAYFEDMDRLHIEKADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  L+  +   G+AY A+ ++ +      +YG  S RK+++ + G   RV   
Sbjct: 115 ATHTLDGIKRLVYELEQKGYAYAADGDVYYSVRRFADYGKLSGRKLEDLQAGASGRVELE 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KK+P DF LWK +   EP WESPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DPETQKKKDPFDFALWKAAKAGEPSWESPWGEGRPGWHIECSAMVRERLGETIDIHVGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI +LL+  +  
Sbjct: 235 DLIFPHHENEIAQSEAATG-QPLARYWMHNGMVKVGGDKMSKSLGNFTTIRDLLDKVE-- 291

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTV----------QRLTEAEILLSKWPQT---STSKG 345
                  V+RL +L THYR P+DFT           Q L E  +    + +        G
Sbjct: 292 -----PMVVRLFILQTHYRNPVDFTEKAIDAASNGWQTLQEGLLFGHHYGEKLAWDDLPG 346

Query: 346 IIDPAVLSA----LYNDLNTVSAIQALHKLARESTKNHDLL-----------------PI 384
              P ++      + +D N    +  L +LA+E  K  ++L                   
Sbjct: 347 ATVPELVQKYREIVDDDFNFAGGLAVLFELAKELRKEGNILVHQGKTDTSPEKLKAQWQT 406

Query: 385 FNASAHILGIEVCK---EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
               + +LG+E      E     +S A IE L+++R    K K F+  D IR +L++ G 
Sbjct: 407 LVELSQVLGLEAIAAQPEQETTGLSDADIEALIEQRAQARKAKNFAEGDRIRDELKANGI 466

Query: 441 ILEDYKNPDNGQRMTRW 457
            L      D G  +T+W
Sbjct: 467 TL-----IDAGGGVTKW 478


>gi|315174139|gb|EFU18156.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 478

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 175/495 (35%), Positives = 256/495 (51%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPI 384
                      ++   ++ + +D N  + I  +++LA+   +  +           +  +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           FN    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FNGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|119872615|ref|YP_930622.1| cysteinyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|189082073|sp|A1RTJ7|SYC_PYRIL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119674023|gb|ABL88279.1| cysteinyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 473

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 177/474 (37%), Positives = 252/474 (53%), Gaps = 44/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQVEEFTTYVPRLARGYVCGITPYDHMHVGHGRVYVFFDIFRRYLERLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA++E           I   +   ++ + T +L        PR
Sbjct: 60  -VRLVINFTDIDDKIINRAKEEFGHEAYKRWREI-PERYIAEYFEMTKKLYIKPAYAYPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I  ++  G+AY A +  + F+ + +PNYG  SR+KI+E   G RV  + 
Sbjct: 118 VTENVEDMVKWISTLVEKGYAYVAPDGSVYFEVAKVPNYGVLSRQKIEELVAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  TP EP W+SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWDSPWCPGRPGWHLECVVMSTKHLGAPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L   K  G +  
Sbjct: 238 HHENEIAIARAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNIITLREVL--SKHSGEA-- 293

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTS---KGIID-------- 348
              +RLA  M+HYR+P++FT + L +AE     L + + + S +    G  D        
Sbjct: 294 ---LRLAYAMSHYRKPMEFTYELLQQAEDMAKTLYTAYDELSQALRDAGEKDQEPLAQEA 350

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFN---ASAHI 391
                A   AL +D++T  A+Q L+ +AR          E       L I N     A +
Sbjct: 351 LKYAEAFYGALDDDMSTPEAVQQLYGMARYIISTVLHKIEKISRETALTILNKYVEMADV 410

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           LG+ + +  + K +   ++ LV+ R  L + +++  ADYIR++L   G  L D+
Sbjct: 411 LGV-LERRQIPKELEEVVKTLVEVRAKLRQERQYQLADYIRQRLAELGVELHDF 463


>gi|255971591|ref|ZP_05422177.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257421384|ref|ZP_05598374.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|255962609|gb|EET95085.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257163208|gb|EEU93168.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|323479282|gb|ADX78721.1| cysteinyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 470

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VADRFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|256956971|ref|ZP_05561142.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257078648|ref|ZP_05573009.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294780003|ref|ZP_06745382.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|256947467|gb|EEU64099.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256986678|gb|EEU73980.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294452897|gb|EFG21320.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
          Length = 470

 Score =  291 bits (744), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VADRFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|238618570|ref|YP_002913395.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238379639|gb|ACR40727.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 470

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 176/488 (36%), Positives = 258/488 (52%), Gaps = 66/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRL- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII+++R            + I +  T+ ++   ++L      
Sbjct: 60  -KGYTVIRVQNITDIDDKIIKKSRD------TGKDWNEIVNYYTKDYLDMLSQLKVKIDI 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 113 H-PRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            ++  KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDP--------- 349
           + W   V+R   L +HYR PIDF+ + L +A+  L +   + +  + II           
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 350 -------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
                        +  +A+ ND +T +A+  +H++ R       +      S   LG  +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRL------VFSTLQYSRDFLGAML 395

Query: 397 CKEHLNKNISI-----------------AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             E L++   +                  I+ +V  R  L +MK +  +D IR++L   G
Sbjct: 396 AFEALSQFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAG 455

Query: 440 FILEDYKN 447
             + D K+
Sbjct: 456 VRILDSKD 463


>gi|221124448|ref|XP_002165201.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 458

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 181/463 (39%), Positives = 250/463 (53%), Gaps = 41/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R +  F  I+P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+    + 
Sbjct: 3   LRIFNTLTRSLQPFTPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGMQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   +I        +T +       D   L    P+ +PR
Sbjct: 62  -VTYVRNITDIDDKIIRRAVERGITI------RQLTDEMIAAMHADIGALHIEPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ LI  +   G AY A+N ++ +       YG  S + +DE + G RV    
Sbjct: 115 ATEYVPQMLSLIGELEAKGLAYRASNGDVNYSVRKFEGYGKLSGKSLDELRAGERVAVLD 174

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WES +G GRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 175 GKEDPLDFVLWKSAKPEEPPEAKWESVFGTGRPGWHIECSAMSCATLGTTFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  AN W+HNGF+ ++  KMSKS GNF TI ++L       R
Sbjct: 235 QFPHHENEIAQSEGAHG-QALANFWMHNGFVRVDNEKMSKSLGNFFTIRDVL-------R 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPAVL- 352
            + A  +R  ++  HYR  ++++   L +A          LS+   T  S    +P    
Sbjct: 287 QYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSQVQATDISIDWSNPFAAR 346

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
             +A+  D  T  A+  L  LA E     S +   LL    A   +L  +    +L    
Sbjct: 347 FKAAMDEDFGTPEAVAVLFDLAGEVNRSKSVEAASLLKALGACLGLLQAD-ANAYLQSGA 405

Query: 406 SIAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILED 444
            +  E  +Q+R+         K F+ AD IRK L ++G +L+D
Sbjct: 406 GLD-EATIQQRIADRAAAKAAKDFALADAIRKDLLAQGIVLKD 447


>gi|29830510|ref|NP_825144.1| cysteinyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|61216621|sp|Q82GD0|SYC_STRAW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29607622|dbj|BAC71679.1| putative cysteinyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 466

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 164/470 (34%), Positives = 250/470 (53%), Gaps = 48/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTSARQIRDFTPLLPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKII ++               I  +N + F      L CL PT++PR
Sbjct: 62  -VTFIRNVTDIDDKIIAKSADH------GRPWWAIGYENERAFNDGYDVLGCLPPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S P Y   S +++D     +   E   
Sbjct: 115 ATGHITEMVEMMRTLIERGHAYEADGNVYFDVRSFPEYLQLSNQELDNLLQPSGEGET-G 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIFPH
Sbjct: 174 KRDPRDFAMWKAAKPGEPTWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W  
Sbjct: 234 HENEIAQAKAFG--DEFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KQWRP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK--GIID------PAVLS 353
            V+R  +   HYR  I+++ + L EAE   ++   + Q    K  G+++      PA   
Sbjct: 285 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGVVEPSPEVPPAFAE 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK------ 398
           A+ +DL    A+  +H   R+                L    A   +LG++         
Sbjct: 345 AMDDDLGVPQALAIVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWAGE 404

Query: 399 ----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               E L+  +   +  ++ +R      K +++AD IR QL   G ++ED
Sbjct: 405 GDRGEDLHGVVDTLVRMVLDQREAARARKDWATADAIRDQLNQSGLVIED 454


>gi|17228587|ref|NP_485135.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|21264005|sp|Q8YXW5|SYC_ANASP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|17130438|dbj|BAB73049.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 486

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 187/508 (36%), Positives = 265/508 (52%), Gaps = 82/508 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           + IYNTL R+    + ++P  ++MY CG TVYD+ H+G+AR  IV+D + R L +  +G 
Sbjct: 3   LTIYNTLTRRQEPLETVEPGKVKMYCCGVTVYDYCHLGHARSYIVWDTIRRYLIWRGFG- 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y++N TDIDDKI+ RA+++  ++      + ++++    +  D  RL  L     P
Sbjct: 62  --VKYIQNFTDIDDKILNRAKEQGLTM------AEVSNRFIDAYFADIRRLNVLDADEYP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV-- 179
           R T HIP++  LIQ +   G AY    ++ +     P+YG  S R++++ + G   RV  
Sbjct: 114 RVTEHIPEIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVDA 173

Query: 180 ----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P+K H   P DF LWK + P EP W+SPWG GRPGWHIECSAM    LG   DIHG
Sbjct: 174 EDSEPKKQH---PFDFALWKAAKPGEPAWDSPWGAGRPGWHIECSAMIRSKLGATIDIHG 230

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHENEIAQS  A   +  A  W HNG + + G+KMSKS GNFITI ELL+  
Sbjct: 231 GGGDLIFPHHENEIAQSEAAMN-QPLARYWTHNGMVMVNGQKMSKSLGNFITIRELLD-- 287

Query: 296 KFGGRSWPA-PV----IRLAMLMTHYREPIDFTVQRLTEAE---------ILLS------ 335
             G  SW   PV    +RL +L  HYR+P+DFT + +  AE         +L        
Sbjct: 288 --GVGSWKEDPVNPMAVRLFVLQAHYRKPLDFTEEAIATAENSWKTLKEGLLFGYQYGEK 345

Query: 336 -KWPQTSTSKGIIDPAVLSALY----NDLNTVSAIQALHKLARESTKNHDLLPIFNAS-- 388
             W Q S     I P + +       +D N    +  L +LA+E  +  ++L     +  
Sbjct: 346 LGWGQESA----IIPELATRFQELGDDDFNFSGGLAVLFELAKELRREGNILVHEGTTKT 401

Query: 389 ---------------AHILGIEVCKEHLNKNIS----IAIEKLVQERLILLKMKKFSSAD 429
                          A ILG+E   +   +  +      IE L+++R    K K FS +D
Sbjct: 402 PSDELQRQWNTLVTLAKILGLEAKLDDETQTQAGLSDTDIEALIEQRQAARKNKNFSESD 461

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRW 457
            IR +L+++G  L D  +P      TRW
Sbjct: 462 RIRNELQAQGVTLID--SPQG----TRW 483


>gi|193083780|gb|ACF09463.1| cysteinyl-tRNA synthetase [uncultured marine crenarchaeote
           KM3-47-D6]
          Length = 462

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 185/471 (39%), Positives = 251/471 (53%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++TL    TE +  D   I  Y+CG TVYD AHIG+AR +IVFDVL R L       
Sbjct: 1   MQIFDTLRNMKTELEFSDKVGI--YLCGVTVYDDAHIGHARTIIVFDVLRRFLES--EGI 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII+RA QE  S P+      + +K T+ +  D   L     T  P+
Sbjct: 57  TVEFVQNFTDVDDKIIDRANQEKIS-PLE-----LAAKYTKNYFDDFDGLNVKRATVYPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A  HI  M  LI +++   +AY   N + F  S    YG  S++KID+   G RV     
Sbjct: 111 AIEHIEDMQNLISSLVDKKYAYVTKNGVYFSVSKFTEYGKLSKKKIDDLISGARVSVDEE 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK S   EP W+SPWG+GRPGWHIECSAMS  YLG+ F+IHGGG DLIFPH
Sbjct: 171 KNNPIDFALWKFSES-EPSWDSPWGKGRPGWHIECSAMSLKYLGENFEIHGGGRDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS       + A IW+H G + + G KMSKS GN  ++N +L+       +W  
Sbjct: 230 HENEIAQSESFIP-NQFAKIWMHVGMITINGEKMSKSLGNVKSVNHVLD-------NWGP 281

Query: 305 PVIRLAMLMTHYREPID----FTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            +IRL  L   Y +PID    F  + +T+   + S + +   ++G+ D  +         
Sbjct: 282 NIIRLFCLSGSYSKPIDYSEKFLKENITKLRQIESCYYELRLAEGVGDEIIAEKLVKECR 341

Query: 353 ----SALYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASAHILGIEVC 397
               SAL NDLNT  A+   +KL RE            T    +L  F   + ILG ++ 
Sbjct: 342 EKFDSALNNDLNTPLALTTFYKLIREVNSLAAEEKITQTSAEIILQEFERMSEILGFQIL 401

Query: 398 K-EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           K     KN    I +++++R      K +  AD IR ++  K  I  D+KN
Sbjct: 402 KVSDAEKN---EINQMIKKRDEYRMKKNYEQADNIRAEIAEKNVIFVDHKN 449


>gi|257418802|ref|ZP_05595796.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257160630|gb|EEU90590.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 470

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEACKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|327182876|gb|AEA31323.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 474

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 266/503 (52%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    I MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 113 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGI 346
             +     V+R  M    YR  I+++ + L +A  +L ++  T T           S+ +
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 344

Query: 347 IDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
            D A          ++A+ +D N  +A+ A+          +DLLP  NA+A+       
Sbjct: 345 PDLAKAIEETEQKFVTAMDDDFNVQNALTAI----------YDLLPAVNANANSEKADKE 394

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G++   +C ++   N    IE+LV++R      K ++++D +R 
Sbjct: 395 TLTLFEKKLAAWLLVFGVDTEKLCAQNAGSN-DDEIEELVKKRDEARANKDWATSDKLRD 453

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 454 QLKEMGITIQD--TP-QGTRWTR 473


>gi|255974563|ref|ZP_05425149.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|257087877|ref|ZP_05582238.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|255967435|gb|EET98057.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256995907|gb|EEU83209.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 470

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|145590332|ref|YP_001152334.1| cysteinyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|189082071|sp|A4WH15|SYC_PYRAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145282100|gb|ABP49682.1| cysteinyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 476

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 179/480 (37%), Positives = 253/480 (52%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQLEEFVTYTPRLARGYVCGITPYDSVHVGHGRVYVFFDMFRRYLEAQGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RAR+E  +        +   +   +F + + RL        P+
Sbjct: 60  -VRLVINFTDIDDKIINRAREEFGAEAYKRWREV-PERYIAEFFEMSKRLFIKPAYAYPK 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I+ ++  G+AY A +  + F+   +PNYG  SR++I+E   G RV  + 
Sbjct: 118 VTENVEDMVSWIKALVEKGYAYTAPDGSVYFEVGKVPNYGVLSRQRIEELMAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  TP EP WESPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWESPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN +T+ E L   K+ G +  
Sbjct: 238 HHENEIAIAKAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNVVTLREAL--SKYSGEA-- 293

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTSKGIIDPAVL---- 352
              +RLA  M+HYR+P++F+ + L +AE +         +  Q     G  D   L    
Sbjct: 294 ---LRLAYAMSHYRKPMEFSYEVLDQAEEMAKTIYTAYDELGQAVGDAGEEDKEALDYGR 350

Query: 353 ------SALYNDLNTVSAIQALHKLARE--STKNH-----------DLLPIFNASAHILG 393
                 +AL +D +T  A Q  + LAR   ST  H            +L  +   A ILG
Sbjct: 351 YVEEFYAALEDDFSTPQAAQQFYGLARYIISTVLHKIDKISRNTALSILSQYVKMADILG 410

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + + +  + K +  A++  V+ R  L K +++  ADYIR++L   G  L D+     GQR
Sbjct: 411 V-LERREVPKEVEEAVKAAVEVRAKLRKERQYQLADYIRERLAGIGVELHDF-----GQR 464


>gi|123966538|ref|YP_001011619.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|187629848|sp|A2BXK1|SYC_PROM5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123200904|gb|ABM72512.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 492

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 184/515 (35%), Positives = 261/515 (50%), Gaps = 89/515 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL + +  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKNVEVFKPIDEE-VKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKI++RA++E      N ++  ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKFVQNFTDIDDKILKRAKEE------NSSMKQVSEKNIAEFHKDMDALGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I+ +   G AY    ++ +      +YG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFIKVLEKKGFAYARGGDVYYSVFKNKDYGKLSNQNILEQNINQQGRMTSD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 173 ESNKKNNPQDFALWKKAKENEPSFDSPWGKGRPGWHIECSAMVKDELGETIDIHLGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI +LL+       
Sbjct: 233 IFPHHENEIAQSESANN-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRDLLD------- 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
           S  +P+ +R  +L  +YR+P+DFT + L  A      W   + +    D           
Sbjct: 285 SGTSPMTLRYFVLTVNYRKPLDFTDEALKSAS---EAWKTINVALSFFDITKKENLSIEV 341

Query: 351 -------------------------VLSALYNDLNTVSAIQALHKLAR---------EST 376
                                      +AL NDLNT  AI  +++LA+         +  
Sbjct: 342 NETNEFVEEKYKEKINYEISQKKIKFTNALNNDLNTAGAIAIIYELAKPLKNFINQFQRI 401

Query: 377 KNHDL-----------LPIFNASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKM 422
           KN D+           L        +LG++  KE +   NK     I  L+ +RLI  K 
Sbjct: 402 KNLDINTNEKFHLRETLKTLEELTQVLGLK--KEEIIIENKITEEQIISLINKRLIAKKG 459

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + ++ AD IR  L+ KG  L      D    +T W
Sbjct: 460 RDYAEADKIRNSLKEKGIEL-----IDQSTELTTW 489


>gi|315143639|gb|EFT87655.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 478

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 259/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|307296635|ref|ZP_07576455.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306495971|gb|EFM65559.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315029626|gb|EFT41558.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 478

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 259/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L       ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEELG---DAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|325956062|ref|YP_004286672.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325332627|gb|ADZ06535.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 474

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 266/503 (52%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    I MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 113 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGI 346
             +     V+R  M    YR  I+++ + L +A  +L ++  T T           S+ +
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 344

Query: 347 IDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
            D A          ++A+ +D N  +A+ A+          +DLLP  NA+A+       
Sbjct: 345 PDLAKAIEETEQKFVTAMDDDFNVQNALTAI----------YDLLPAVNANANSEKADKE 394

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G++   +C ++   N    IE+LV++R      K ++++D +R 
Sbjct: 395 TLTLFEKNLAAWLLVFGVDTEKLCAQNAGSN-DDEIEELVKKRDEARANKDWATSDKLRD 453

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 454 QLKEMGITIQD--TP-QGTRWTR 473


>gi|327533897|gb|AEA92731.1| cysteine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 478

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 259/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILTFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|315037580|ref|YP_004031148.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312275713|gb|ADQ58353.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 477

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 266/503 (52%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    I MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 4   LKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYK-GYK 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGI 346
             +     V+R  M    YR  I+++ + L +A  +L ++  T T           S+ +
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 347

Query: 347 IDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
            D A          ++A+ +D N  +A+ A+          +DLLP  NA+A+       
Sbjct: 348 PDLAKAIEETEQKFVTAMDDDFNVQNALTAI----------YDLLPAVNANANSEKADKE 397

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G++   +C ++   N    IE+LV++R      K ++++D +R 
Sbjct: 398 TLTLFEKKLAAWLLVFGVDTEKLCAQNAGSN-DDEIEELVKKRDEARANKDWATSDKLRD 456

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 457 QLKEMGITIQD--TP-QGTRWTR 476


>gi|171184546|ref|YP_001793465.1| cysteinyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558796|sp|B1YA45|SYC_THENV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|170933758|gb|ACB39019.1| cysteinyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 474

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 175/474 (36%), Positives = 252/474 (53%), Gaps = 44/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQVEEFTTYVPRLARGYVCGITPYDHMHVGHGRVYVFFDIFRRYLERLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKI+ +AR+E           +   +   ++ + T RL        P+
Sbjct: 60  -VRLVINFTDIDDKIVNKAREEFGHEAYKRWREV-PERYIAEYFEMTRRLYIKPAYAYPK 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I  ++  G+AY A +  + F+ + +PNYG  SR+KI+E   G RV  + 
Sbjct: 118 VTENVEDMVKWISTLVEKGYAYVAPDGSVYFEVAKVPNYGVLSRQKIEELIAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  TP EP W SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWNSPWCPGRPGWHLECVVMSTKHLGAPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L   K  G +  
Sbjct: 238 HHENEIAIARAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNIITLREVL--SKHSGEA-- 293

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTS---KGIIDP------- 349
              +RLA  M+HYR+P++FT + L +AE     L + + + S +    G  D        
Sbjct: 294 ---LRLAYAMSHYRKPMEFTYELLQQAEDMAKTLYTAYDELSQALRDAGEKDQEPIAQEA 350

Query: 350 -----AVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFN---ASAHI 391
                A   AL +D++T  A+Q L+ +AR          E       L + N     A +
Sbjct: 351 LKYAGAFYGALDDDMSTPEAVQQLYGMARYIISTVLHRVEKISRETALAVLNKYVEMADV 410

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           LG+ + +  + K +  A++ LV+ R  L + +++  ADYIR++L   G  L D+
Sbjct: 411 LGV-LERRQIPKELEEAVKALVETRARLRQERQYQLADYIRQRLAELGVELHDF 463


>gi|148543540|ref|YP_001270910.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152946|ref|YP_001841287.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363504|ref|ZP_03847624.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|189082068|sp|A5VI99|SYC_LACRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558714|sp|B2G5S5|SYC_LACRJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148530574|gb|ABQ82573.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224290|dbj|BAG24807.1| cysteinyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071441|gb|EEI09744.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
          Length = 470

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/483 (35%), Positives = 259/483 (53%), Gaps = 67/483 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +  G K
Sbjct: 2   LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFK-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K    F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAAEQGITVPQ------LAEKYINAFMEDTAAINIEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I ++I  +Q +I  G+AY  + ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 174 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A+  +K    W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 234 EFPHHENEIAQS-EAETGQKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 287 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQTAFDNLTYREQDADEGDVQE 345

Query: 350 AV----------LSALYNDLNTVSAIQALHKLAR----------------ESTKNH--DL 381
                       ++A+ +D+N  + I  +++L +                ++ K    +L
Sbjct: 346 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVEL 405

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           + IF      + +E     +N      I++L++ER I  K K F+ +D IR  L+ +G I
Sbjct: 406 MSIFG-----VKLEASDNQINDE---KIKQLIEERNIARKNKDFARSDEIRDNLKKQGII 457

Query: 442 LED 444
           LED
Sbjct: 458 LED 460


>gi|315171290|gb|EFU15307.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 478

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 259/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAKRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|104774470|ref|YP_619450.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077205|sp|Q1G8Z0|SYC_LACDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|103423551|emb|CAI98469.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 474

 Score =  290 bits (743), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 178/496 (35%), Positives = 268/496 (54%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y  G K
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYK-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEAGAEGTTVPE------LAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ + T    +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRTKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  N +T++++L     
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDEEKMSKSLHNCVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PAVL-----------SALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIF----N 386
           P +            +A+ +D N  +A+ A+++        A     + + L +F     
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K    +  +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
              P    + TRW ++
Sbjct: 465 --TP----QGTRWSRE 474


>gi|77745319|gb|ABB02560.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 470

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 173/485 (35%), Positives = 261/485 (53%), Gaps = 71/485 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +  G K
Sbjct: 2   LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFK-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K    F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAAEQGITVPQ------LAEKYINAFMEDTAAINIEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I ++I  +Q ++  G+AY  + ++ + +    +YG  S + +D+ ++G        
Sbjct: 114 ATENITEIIKFVQGLVEKGYAYPKDGDVYYRSRKFNHYGQLSGQSLDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 174 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A+  +K    W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 234 EFPHHENEIAQS-EAETGQKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 287 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQIAFDNLTYREQDADEGDVQE 345

Query: 350 AV----------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-----ILGI 394
                       ++A+ +D+N  + I  +++L + +          N  AH     +  I
Sbjct: 346 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYA----------NVYAHQDNVSLGAI 395

Query: 395 EVCKEHLNKNISI---------------AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           +  K+ L + +SI                I++L++ER I  K K F+ +D IR  L+ +G
Sbjct: 396 QAIKKELVELMSIFGVKLEASDNQINDEKIKQLIEERNIARKNKDFARSDEIRHNLKKQG 455

Query: 440 FILED 444
            ILED
Sbjct: 456 IILED 460


>gi|312903154|ref|ZP_07762335.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|310633545|gb|EFQ16828.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315163378|gb|EFU07395.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578631|gb|EFU90822.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 478

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 259/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|159484322|ref|XP_001700207.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158272523|gb|EDO98322.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 637

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 149/365 (40%), Positives = 211/365 (57%), Gaps = 47/365 (12%)

Query: 1   MKKKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           +++++  +NT+ +    F+  +   ++ MYVCG TVYD++HIG+AR  + FDVLYR L  
Sbjct: 32  LRERVTFFNTMSKSKELFRPRLSDGSVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLSA 91

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             G K VTYVRN TDIDDKII RA+Q    +  ++    +T +   +F KD   L  L P
Sbjct: 92  ACGYK-VTYVRNFTDIDDKIIARAQQARSGVETSE----LTERFIDEFNKDMAALNVLPP 146

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             +PRAT  +PQMI  I +II +GHAY  +  ++ FD +S+P YG  S R+ ++ + G R
Sbjct: 147 ALEPRATAFVPQMISTITDIIANGHAYAVDGGDVFFDVASLPGYGRLSGRQQEDNRAGER 206

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++PADF LWK + P EP W SPWG GRPGWHIECS+M    +G V DIHGGG 
Sbjct: 207 VAVDSRKRSPADFALWKAAKPGEPAWPSPWGPGRPGWHIECSSMIRELMGPVIDIHGGGR 266

Query: 239 DLIFPHHENEIAQSCCA------------------------------DRIEKTANI---W 265
           DL+FPHHENE+AQS  A                               ++    +    W
Sbjct: 267 DLVFPHHENELAQSQAACGCGQHGHEHGHEHGGQQGGASTSGGDGSQSQLHNGTDFVRYW 326

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +HNGF+N++  KMSKS GNF TI ++L       R  P   +R  ++ + YR P++++ +
Sbjct: 327 LHNGFVNVDSEKMSKSLGNFFTIRDVL------ARYHPL-ALRWFLVSSQYRAPLNYSDK 379

Query: 326 RLTEA 330
            L +A
Sbjct: 380 GLEDA 384


>gi|256960771|ref|ZP_05564942.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951267|gb|EEU67899.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 470

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|325526735|gb|EGD04251.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 465

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/472 (37%), Positives = 250/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +       D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHADEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A++ ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATLFIPQMLGMIEKLEANGYAYQASDGDVNYSVRKFRNYGKLSGKSLDDLRAGERVAS 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDTLALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQASGAAQAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGVALED 454


>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 482

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 176/500 (35%), Positives = 247/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++  G
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHV-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYV+N TD+DDKII  +  E  S         I ++    + +    L        
Sbjct: 61  YK-VTYVQNFTDVDDKIINTSNGEGVSW------DTIANRYIDSYFEVMDALGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +IQ +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS            W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---- 350
               +R  +L THYR P+DF+ +RL EA   L +                G  D A    
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRLL 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------------IF 385
                       A+ +D NT  A  ++  LA+E    +  +                 IF
Sbjct: 347 EKAKAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILGI-EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G+ E   E      +   E+L+Q     R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED  +P       RWK++
Sbjct: 467 TIED--SPQGA----RWKKR 480


>gi|319794160|ref|YP_004155800.1| cysteinyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315596623|gb|ADU37689.1| cysteinyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 458

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 182/465 (39%), Positives = 249/465 (53%), Gaps = 45/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R++ EF  + P  +RMYVCG TVYD+ H+G+AR MI FDV+ R L+    + 
Sbjct: 3   LRIYNTLSRELEEFSPLQPGKVRMYVCGMTVYDYCHLGHARSMIAFDVVQRWLKASGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA      +   ++I  +T +      +D   L    PTH+PR
Sbjct: 62  -VTYVRNITDIDDKIIRRA------VENGESIRALTDRMIDALHEDADALGIARPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++IPQM+ +I  +   G AY A N ++ +     P YG  S + IDE   G RV    
Sbjct: 115 ATDYIPQMLSMIGTLEKKGLAYRAENGDVNYAIRKFPGYGKLSGKSIDELHAGERVAVLD 174

Query: 184 HKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P D +LWK    S P E  W S +G GRPGWHIECSAM+   LG+  DIHGGG DL
Sbjct: 175 GKDDPLDPVLWKSAKASEPEEVKWASEFGAGRPGWHIECSAMACALLGETLDIHGGGEDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A+  +  +N W+HNGF+  +  KMSKS GNF  I ++L       +
Sbjct: 235 QFPHHENEIAQSEGAND-KPLSNYWMHNGFIVTDNEKMSKSLGNFFLIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  IR  +L  HYR P++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 KYDAETIRFFVLRAHYRRPLNYSDVHLDDARNSLKR---LYTALDLVAPAEVTIDWTDPY 343

Query: 353 -----SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIEVCKEHLN 402
                +A+  D  T  A+  L  LA E     S     LL        IL  +  K  L 
Sbjct: 344 AARFKAAMDEDFATPEAVAVLFDLAGEVNRTRSATQAGLLKALGGCVQILQSD-PKSFLR 402

Query: 403 KNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              ++   AI+  +  R      K F+ AD IR+ L  +G +L+D
Sbjct: 403 AGATLDDAAIQAQIDARAAAKAAKNFAEADRIRQGLLEQGIVLKD 447


>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 511

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 182/505 (36%), Positives = 256/505 (50%), Gaps = 77/505 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++K+YNT+ ++      I P  I +YVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 5   KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLG 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V +VRN TD+DDKII RA  E+   P++     ++++  ++++ D   L CL PTH
Sbjct: 65  YE--VNFVRNFTDVDDKIIIRA-NENGEDPLD-----LSNRFCEEYLVDMGALQCLLPTH 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR + H+  +I +I+ II     Y    ++ F     PNYG  S + ++  + G RV  
Sbjct: 117 QPRVSEHMDHIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+HYL   FDIHGGG DL 
Sbjct: 177 DSRKRNPADFALWKAAKPEEPSWESPWGPGRPGWHIECSAMSAHYLSPKFDIHGGGADLK 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG + +   KM+KS  NF TI E+         S
Sbjct: 237 FPHHENEIAQTCAACE-DSGVNYWLHNGHVTINNEKMAKSKKNFKTIREITA-------S 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------------------------SK 336
           +    +R  ++   YR P+ F+  +L  +   L                          K
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFSASQLESSSDALYYVYQTLQDLDEDLSPYREALSEDGGK 348

Query: 337 WPQTSTSKGII---DPAVLSALYNDLNTVSAIQALH------------KLARESTKNH-- 379
             QT   K II        S + +DLNT   +   +            KL +   K    
Sbjct: 349 AEQTPEGKDIIKKLKSEFESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQKKQRMS 408

Query: 380 ---DLLPIFNASAHILGI----------EVCKEHLNKNISIA------IEKLVQERLILL 420
               L+ I  A+  +L +          EV KE   K +  A      I + +++R+   
Sbjct: 409 MLVSLVEIEKAAREVLDVLGLLTTLSYAEVLKEMKLKTLIRAEMGEEDILREIEDRITAR 468

Query: 421 KMKKFSSADYIRKQLESKGFILEDY 445
             K F+ +D IR++L  KG  L D+
Sbjct: 469 NNKDFAKSDEIREKLTRKGIALMDF 493


>gi|227545183|ref|ZP_03975232.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300909140|ref|ZP_07126601.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227184829|gb|EEI64900.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300893005|gb|EFK86364.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 478

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 171/483 (35%), Positives = 260/483 (53%), Gaps = 67/483 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +  G K
Sbjct: 10  LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFK-GYK 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K    F++DT  +     T  PR
Sbjct: 69  -VNYVSNFTDVDDKMIKAAAEQGITVPQ------LAEKYINAFMEDTAAINIEPATLHPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I ++I  +Q ++  G+AY  + ++ + +    +YG  S + +D+ ++G        
Sbjct: 122 ATENITEIIKFVQGLVEKGYAYPKDGDVYYRSRKFNHYGQLSGQSLDDLEVGASEHVSAD 181

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 182 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 241

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A+  +K    W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 242 EFPHHENEIAQS-EAETGQKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 295 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQIAFDNLTYREQDADEGDVQE 353

Query: 350 AV----------LSALYNDLNTVSAIQALHKLAR----------------ESTKNH--DL 381
                       ++A+ +D+N  + I  +++L +                ++ K    +L
Sbjct: 354 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVEL 413

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           + IF      + +E     +N      I++L++ER I  K K F+ +D IR  L+ +G I
Sbjct: 414 MSIFG-----VKLEASDNQINDE---KIKQLIEERNIARKNKDFARSDEIRDNLKKQGII 465

Query: 442 LED 444
           LED
Sbjct: 466 LED 468


>gi|227533678|ref|ZP_03963727.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227188662|gb|EEI68729.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 461

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 182/486 (37%), Positives = 258/486 (53%), Gaps = 61/486 (12%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + RK   F  + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y  G K VTYV 
Sbjct: 1   MSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYR-GYK-VTYVS 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII  A +   + P++ A   I +     F++DTT L     T  PRA+  IP
Sbjct: 59  NFTDVDDKIINAAHKTGEA-PLDLAQRFIDA-----FMEDTTALGIEPATAHPRASQMIP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PEKYHKK 186
            +I  +Q++I   +AY  + ++ +      +YG  S + +DE + G        E   K+
Sbjct: 113 DIIDFVQDLIDKEYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQDELAKKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF LWK + P E  WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DL FPHHE
Sbjct: 173 DPIDFALWKAAKPGEISWESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDLEFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           NEIAQS  A   ++    W+HNGF+ +  +  KMSKS GNFIT++++ +T          
Sbjct: 233 NEIAQS-EAKTDKQFVRYWMHNGFVTIGEDDEKMSKSLGNFITVHDIRKTVD-------P 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQTSTSKG 345
            V+R  M  T YR PI ++   L  A   L++                    PQ +    
Sbjct: 285 QVLRFFMAGTQYRMPIRYSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQITKQLQ 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKN---HDLLPIFNASAHILGI 394
            +    ++A+ +D+N  + +  L  LA+        E+ K+   +DLL  ++A   I G+
Sbjct: 345 TLKDRFVTAMDDDINVQNGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAWLQIFGV 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +   KN+   I+ LV+ R      K F+ +D IR QL ++G ILED   P    + 
Sbjct: 405 VFADQ---KNLDADIDALVKARDAARAAKDFAKSDQIRDQLAAQGIILED--TP----QG 455

Query: 455 TRWKQK 460
           TRW+++
Sbjct: 456 TRWRRQ 461


>gi|325681889|ref|ZP_08161407.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|324978533|gb|EGC15482.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 478

 Score =  290 bits (742), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 172/483 (35%), Positives = 259/483 (53%), Gaps = 67/483 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +  G K
Sbjct: 10  LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFK-GYK 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K    F++DT  +     T  PR
Sbjct: 69  -VNYVSNFTDVDDKMIKAAAEQGITVPQ------LAEKYINAFMEDTAAINIEPATLHPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I ++I  +Q +I  G+AY  + ++ +      +YG  S + +D+ ++G        
Sbjct: 122 ATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSAD 181

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 182 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 241

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A+  +K    W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 242 EFPHHENEIAQS-EAETGQKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 295 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQTAFDNLTYREQDADEGDVQE 353

Query: 350 AV----------LSALYNDLNTVSAIQALHKLAR----------------ESTKNH--DL 381
                       ++A+ +D+N  + I  +++L +                ++ K    +L
Sbjct: 354 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVEL 413

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           + IF      + +E     +N      I++L++ER I  K K F+ +D IR  L+ +G I
Sbjct: 414 MSIFG-----VKLEASDNQINDE---KIKQLIEERNIARKNKDFARSDEIRDNLKKQGII 465

Query: 442 LED 444
           LED
Sbjct: 466 LED 468


>gi|257081388|ref|ZP_05575749.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989418|gb|EEU76720.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 470

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---LDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|78066853|ref|YP_369622.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
 gi|109894879|sp|Q39EY8|SYC2_BURS3 RecName: Full=Cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|77967598|gb|ABB08978.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 465

 Score =  290 bits (742), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 176/470 (37%), Positives = 248/470 (52%), Gaps = 45/470 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA      +   + I  +T +       D + L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHDDESALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATEFIPQMLGMIETLETNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGTSWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++   T+      D   L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRL-YTALKDVEADTLALDWNEPH 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHILGI 394
                +A+ +D NT  A+  L +LA E  +  D                +       L  
Sbjct: 345 AQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQ 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 405 ASGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLETGIALED 454


>gi|227518065|ref|ZP_03948114.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256964025|ref|ZP_05568196.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257084048|ref|ZP_05578409.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|227074501|gb|EEI12464.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256954521|gb|EEU71153.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256992078|gb|EEU79380.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 470

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 258/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|257417468|ref|ZP_05594462.1| cysteinyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|300862011|ref|ZP_07108091.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|257159296|gb|EEU89256.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|295112378|emb|CBL31015.1| cysteinyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300848536|gb|EFK76293.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 470

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 258/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|91070003|gb|ABE10929.1| cysteinyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           ASNC3046]
          Length = 489

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 195/509 (38%), Positives = 264/509 (51%), Gaps = 80/509 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +K+  F+ ID   +++Y CG TVYD  H+G+AR  I +D+L R L   Y + 
Sbjct: 2   IKLFNTLSKKVEVFKPIDDV-VKIYCCGVTVYDLCHLGHARSYIAWDILRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E  S+        ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEESSSMKE------VSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---KMGTRVPE 181
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + + EQ   + G  V E
Sbjct: 113 ATNHICNICSFITVLEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNLQEQNINQQGRMVNE 172

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  KK NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+       +
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELI-------K 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDP--- 349
           S  +P+ +R  ++  +YR+P+DFT + L  A        I LS    T  +   ID    
Sbjct: 285 SGISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKDAFKSIDKNES 344

Query: 350 ------------------AVLSALYNDLNTVSAIQALHKLAR------------ESTK-- 377
                                 AL NDLNT  AI  ++ LA+            E  K  
Sbjct: 345 IEVEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVECFKID 404

Query: 378 -NHDLLPIFNAS-----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSA 428
            N     I N         +LG++  KE L K   I    I  L+ ERL   K K ++ A
Sbjct: 405 LNEKFFLIENFKTLEKLTEVLGLK--KEVLVKESKIKDDEISSLIDERLKAKKEKNYAKA 462

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           D IR  L+ KG  L      D  + +T W
Sbjct: 463 DEIRNFLKEKGIEL-----IDQSKEITTW 486


>gi|256761895|ref|ZP_05502475.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256683146|gb|EEU22841.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 470

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 259/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAVANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|158340032|ref|YP_001521202.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158310273|gb|ABW31888.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 496

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 185/509 (36%), Positives = 256/509 (50%), Gaps = 73/509 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL  +   F ++ P  + MY CG TVYD  H+G+AR  + +DVL R L++     
Sbjct: 3   LTLHNTLTNQKEPFISVHPERVVMYCCGVTVYDNCHLGHARSYMAWDVLRRYLKWC--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            V YV+N TDIDDKI+ RA        I + I++  ++ +    + +D  RL  L     
Sbjct: 61  TVRYVQNFTDIDDKILHRA--------IVEGITMQEVSDRYINAYFRDIRRLNILDADDY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
           PR T HIP +  LIQ +   G+AY  + ++ +       YG  S RK+++ K+G   RV 
Sbjct: 113 PRVTEHIPAIHQLIQALEQQGYAYAIDGDVYYSVRQFSEYGKLSGRKLEQLKVGAGGRVA 172

Query: 181 EKYH---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +      K++P DF LWK + P EP WESPWG GRPGWHIECSAM    LG+  DIHGGG
Sbjct: 173 DDTQDQKKRDPFDFALWKSAKPGEPAWESPWGLGRPGWHIECSAMIRARLGETIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENEIAQS      +  A  W+HNG + + G KMSKS GNF TI +LL+    
Sbjct: 233 GDLVFPHHENEIAQSEVLTG-QPLARYWLHNGMVTVNGEKMSKSLGNFTTIRDLLDG--- 288

Query: 298 GGRSWPAPV----IRLAMLMTHYREPIDFTVQRLT---------EAEIL----------- 333
           G   +P PV    +RL +L  HYR+P+DFT   +          +A IL           
Sbjct: 289 GWADYPEPVDPMAVRLFVLQGHYRKPLDFTKDAIVASINSWQTLKAGILFGNRHRVALSS 348

Query: 334 ----LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS- 388
               +   PQ  +S+        SA+ +DLNT  A+  L +LA+   +  + L     S 
Sbjct: 349 PFASIQSSPQEPSSEDPWTKRFQSAMDDDLNTSGALAVLFELAKALQREGNRLVHEGKSQ 408

Query: 389 ----------------AHILGIEV-----CKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
                           A +LG+E        E   K     I  L+Q+R    K + F +
Sbjct: 409 SSPELLWQQWQTLLYLAQVLGLEAKVNSDTDEATGKLDEAVITDLIQQRQTARKQRDFIT 468

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           AD IR QL + G  + D   PD   R  R
Sbjct: 469 ADDIRAQLSAAGITVVD--QPDGATRWHR 495


>gi|312901251|ref|ZP_07760534.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291628|gb|EFQ70184.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 478

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 175/495 (35%), Positives = 259/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +D   L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDAQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|260221171|emb|CBA29469.1| Cysteinyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 483

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 181/463 (39%), Positives = 250/463 (53%), Gaps = 41/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R +  F  I+P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+    + 
Sbjct: 28  LRIFNTLTRSLQPFTPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGMQ- 86

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   +I        +T +       D   L    P+ +PR
Sbjct: 87  -VTYVRNITDIDDKIIRRAVERGITI------RQLTDEMIAAMHADIGALHIEPPSVEPR 139

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ LI  +   G AY A+N ++ +       YG  S + +DE + G RV    
Sbjct: 140 ATEYVPQMLSLIGELEAKGLAYRASNGDVNYSVRKFEGYGKLSGKSLDELRAGERVAVLD 199

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WES +G GRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 200 GKEDPLDFVLWKSAKPEEPPEAKWESVFGTGRPGWHIECSAMSCATLGTTFDIHGGGADL 259

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  AN W+HNGF+ ++  KMSKS GNF TI ++L       R
Sbjct: 260 QFPHHENEIAQSEGAHG-QALANFWMHNGFVRVDNEKMSKSLGNFFTIRDVL-------R 311

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPAVL- 352
            + A  +R  ++  HYR  ++++   L +A          LS+   T  S    +P    
Sbjct: 312 QYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSQVQATDISIDWSNPFAAR 371

Query: 353 --SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
             +A+  D  T  A+  L  LA E     S +   LL    A   +L  +    +L    
Sbjct: 372 FKAAMDEDFGTPEAVAVLFDLAGEVNRSKSVEAASLLKALGACLGLLQAD-ANAYLQSGA 430

Query: 406 SIAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILED 444
            +  E  +Q+R+         K F+ AD IRK L ++G +L+D
Sbjct: 431 GLD-EATIQQRIADRAAAKAAKDFALADAIRKDLLAQGIVLKD 472


>gi|282860520|ref|ZP_06269586.1| cysteinyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282564256|gb|EFB69792.1| cysteinyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 465

 Score =  290 bits (741), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 162/469 (34%), Positives = 250/469 (53%), Gaps = 47/469 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLYDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKII+++ ++      N     I  +N + F      L CL PT++PR
Sbjct: 62  -VTFIRNVTDIDDKIIKKSAEQ------NRPWWSIGYENERAFNDGYDALGCLPPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S   Y   S + +D+ +  +   E   
Sbjct: 115 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSYEGYLELSNQDLDDLRQPSGEGET-G 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIFPH
Sbjct: 174 KRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      ++ A  W+HNG++ + G KMSKS GN + ++E++       + W  
Sbjct: 234 HENEIAQAKAFG--DEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KRWRP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAV------LS 353
            V+R  +   HYR  I+++ + L EAE   ++        T  + G + PA         
Sbjct: 285 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEMAGGEVAPAAEVPPAFAE 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGI---------E 395
           A+ +DL    A+  +H   R+                L    A   +LG+         E
Sbjct: 345 AMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDAHWVSE 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              E L+  +   +  ++ +R      K + +AD IR +L   G ++ED
Sbjct: 405 TEGEDLHGVVDTLVRLVLDQRQAARDRKDWPAADAIRDRLSQAGLVIED 453


>gi|184154737|ref|YP_001843077.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|227514004|ref|ZP_03944053.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260663234|ref|ZP_05864126.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|229558713|sp|B2GAB5|SYC_LACF3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183226081|dbj|BAG26597.1| cysteinyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227087648|gb|EEI22960.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260552426|gb|EEX25477.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 472

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 168/483 (34%), Positives = 252/483 (52%), Gaps = 67/483 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF       + MYVCGPTVY++ HIGNAR ++ FD + R L +     
Sbjct: 2   LKIYNTLTRQKEEFHPQQAGIVNMYVCGPTVYNYIHIGNARSVVAFDTVRRYLEF--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A+++  ++P       +  K  Q +++DT  L     T  PR
Sbjct: 60  QVNYVSNFTDVDDKMIKAAKEQGITVPE------LAYKYIQAYMEDTAALNVEPATTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I  +I  I+++I  G+AY++  ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENIDGIISFIEDLIEKGYAYQSGGDVYYRARKFAHYGQLSGQSLDDLEVGASEHVSTE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   KK+P DF LWK + P E  W+SPWG GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 EVAKKKDPLDFALWKAAKPGEIKWDSPWGAGRPGWHIECSVMSTKYLGDTLDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A    +  N W+HNGF+ +  +  KMSKS GNF+T+++L+      
Sbjct: 234 EFPHHENEIAQS-EAKTGHRFVNYWMHNGFVTIGRDNEKMSKSLGNFVTVHDLI------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------------KWPQTSTSKG 345
            +     V+R  M  T YR PI ++ + L EA+  L              K   + T  G
Sbjct: 287 -KEVDPQVLRFFMSTTQYRRPIQYSQESLVEAQANLEHLKNTYDNLAYRLKDATSGTDGG 345

Query: 346 I------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------L 381
           +           ++A+ +D+N  + I  +++L R + +  +                  L
Sbjct: 346 VQRQLADFRARFVAAMDDDINVQNGIAVVYELMRFANQYVEQRLVQREPIVAIQLMLKRL 405

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           + +F     +   E+  E         I++L+++R      K F+ +D IR QL  +G I
Sbjct: 406 VAVFGVDLAVSATEINDEK--------IKELIEKRNAARAEKDFALSDQIRDQLRDQGII 457

Query: 442 LED 444
           LED
Sbjct: 458 LED 460


>gi|170017958|ref|YP_001728877.1| cysteinyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|226735061|sp|B1MW68|SYC_LEUCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169804815|gb|ACA83433.1| cysteinyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 469

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 182/486 (37%), Positives = 260/486 (53%), Gaps = 59/486 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F AI P  + MYVCGPTVY++ HIGNAR  I FDV+ R L Y     
Sbjct: 2   IHVYNTLSREKEAFHAITPGKVNMYVCGPTVYNYIHIGNARSAIAFDVIRRYLEY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR+E       D ++I   K  Q F +DT  L     T + R
Sbjct: 60  VVNYVSNFTDVDDKIIQRAREEGV-----DEMTI-ADKYAQAFDEDTIPLNIKPATTRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  IP +I  ++++I  G+AYE+  ++ F       YG  + + + E +     R+ ++
Sbjct: 114 ATAVIPDIIAFVEDLIHKGYAYESAGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLDDQ 173

Query: 183 --YHKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               K++P DF +WK S +  E  W SPWG+GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 174 ELTRKEDPIDFAVWKASHSSDEISWVSPWGKGRPGWHIECSVMAQKYLADTIDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           L FPHH NEIAQS    R  +T  N W+HNGF+N+   KMSKS GNF T++++L      
Sbjct: 234 LAFPHHTNEIAQSEA--RTGQTFVNYWLHNGFVNVNDEKMSKSLGNFTTVHDMLA----- 286

Query: 299 GRSWPAP-VIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------WPQTSTSKGIIDP 349
              +  P VIR  +  T YR PI++    L +A   L +        + + ST+K   D 
Sbjct: 287 --HYDDPMVIRYLLATTQYRRPINYAPDTLEQARAELERIRTAYRNVFFRISTAKTGHDD 344

Query: 350 AV-----------LSALYNDLNTVSAIQALHKL--------ARESTKNHDLLPIFNASA- 389
           +V             A+ +D NT +AI ++ +L        +R+  K      + +A A 
Sbjct: 345 SVDYAIAEHISHFREAMDDDFNTQNAIASIFELVTIANNYASRDEIKLDTATRLTHAIAD 404

Query: 390 --HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             ++ G+    EHL   +S   + L+ +R+    ++ F+ +D +R QL   G I+ED   
Sbjct: 405 LMNVFGVNGLSEHL--TLSAEAQALLDKRVQARAVRDFNLSDQLRDQLSDMGIIVED--- 459

Query: 448 PDNGQR 453
              GQR
Sbjct: 460 TTQGQR 465


>gi|256855023|ref|ZP_05560384.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256709536|gb|EEU24583.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
          Length = 470

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 258/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L       ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEELG---DAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|159905981|ref|YP_001549643.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|229558715|sp|A9AAN8|SYC_METM6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|159887474|gb|ABX02411.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 476

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 176/485 (36%), Positives = 248/485 (51%), Gaps = 56/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ ++   ++MYVCGPTVYD  H+G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKPLNEKEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHI--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA  E+   P   +   IT      F+ D T L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRA-NENGKNPKELSEQFITV-----FLNDMTTLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I  I+ +I  G AYE  N + F+     NYG  S   +++   G R+     
Sbjct: 114 VTEHIPEIIAFIEKLIEKGFAYETENGVYFEVKKFENYGKLSNINLEDLFSGVRIETSEE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK + P EP W+SP+  GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNPEDFALWKTAKPGEPKWKSPFVEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI  +        + +  
Sbjct: 234 HENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEGI-------SKEYDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDPAVL- 352
            ++R   +  HYR PID+T + +T  +  L K             ++  S+   +  VL 
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESITHVKNNLEKIYNVIENIRISLEKSEKSRVWGENEVLL 345

Query: 353 ------------SALYNDLNTVSAIQALHKLARESTKNHDLLP------------IFNAS 388
                        A+ +D NTV A++++ +++    K   L+              F   
Sbjct: 346 YDILKNSKRNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVKTPSEGLLLKAFDFFKIV 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     K     +    I+ L++ R  L   K +  +D IR  L++ G+ +ED  
Sbjct: 406 GEIFGLFENYFKTSSESDDEEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIED-- 463

Query: 447 NPDNG 451
           NP  G
Sbjct: 464 NPKEG 468


>gi|325479181|gb|EGC82278.1| cysteine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 472

 Score =  290 bits (741), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 180/480 (37%), Positives = 263/480 (54%), Gaps = 58/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+ + I+MYVCGPTVYD+ HIGNARP++VFD   R + +   + 
Sbjct: 1   MKIHNTLTRQKEEFIPINENEIKMYVCGPTVYDYMHIGNARPLVVFDTFRRYMTFKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V YV N TD+DDKII +      SI        +T K  + +++D   L      T  P
Sbjct: 60  -VKYVVNFTDVDDKIINK------SIAEGITTKEVTDKYIKAYMEDAKDLNIDEENTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
           RAT  +  +I  I+ ++    AYE+  ++ FD S   +YG  S + I++   G       
Sbjct: 113 RATEVMDDIIAFIKGLVDKNMAYESEGDVYFDVSKADDYGKLSGKNIEDLVHGASNRLDT 172

Query: 180 PEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +   KK+P DF LWK++    E  W SPWG GRPGWHIECS MS   LG+  DIH GG 
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWSSPWGEGRPGWHIECSTMSKKILGETIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHHENEIAQS   +  EKT AN W+HNG + ++G KMSKS GNF T++++      
Sbjct: 233 DLEFPHHENEIAQSEGLN--EKTFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------ 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA----EILLSKWPQTSTS 343
             + +   VIR  +L T+YR+PI+FT          + RLT A    E L++K  + + S
Sbjct: 285 -KKEYDLGVIRFWLLTTNYRQPINFTREIIEQAKASLNRLTNAYFRLEDLITKAEEKAIS 343

Query: 344 ---KGIID------PAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNA 387
              K +++         +  + +DLNT  AI  L  +A+       E+T    L   F+ 
Sbjct: 344 EEEKNLLENLDKFKENFIEVMDDDLNTADAITVLFDMAKFINTKLSETTSKEVLEKTFDL 403

Query: 388 SAHI---LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +   LG+   K+ ++ ++   IE+L+++R +  K K F++AD IR  L + G  ++D
Sbjct: 404 YKDLFASLGLVAKKKEVDVDVE-RIEELIEKRSLAKKNKDFATADAIRDVLTAMGITIKD 462


>gi|303232418|ref|ZP_07319110.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481502|gb|EFL44570.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 508

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 183/515 (35%), Positives = 252/515 (48%), Gaps = 98/515 (19%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYN+   K  EF   +   +RMYVCGPTVYD  HIGNAR  + FD + R L+Y   E  V
Sbjct: 4   IYNSQTHKKEEFIPAEKGRVRMYVCGPTVYDQIHIGNARTFLSFDTIRRYLQYKGFE--V 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            + +N+TD+DDKII RA +           S I    ++ F++   R   L P  +PRAT
Sbjct: 62  VFAQNLTDVDDKIINRANENGVEA------SEIARTYSRAFIEQMHRFNILDPDIRPRAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             I  M  +IQ +I +  AY A+N ++ F   S  +YG+ S R +D+ + G RV     K
Sbjct: 116 QEIHAMQTMIQTLIANKCAYVADNGDVYFSVRSDASYGTVSGRNLDDLRAGERVEVNDAK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP W+SPWG GRPGWH EC AM  HYL    DIHGGG DL+FPHH
Sbjct: 176 RDPFDFALWKAAKPGEPAWDSPWGAGRPGWHTECCAMIHHYLDAPIDIHGGGQDLMFPHH 235

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENE AQS CA   +  A+ W+H G L ++G KMSKS GNF T+ ++L+T       + A 
Sbjct: 236 ENENAQSVCA-WSQPLAHYWMHTGMLRVDGEKMSKSLGNFYTLKDVLDT-------YSAD 287

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKG----------- 345
            +RL ML THYR P+DF+ +RL  A+  L+         +W     S+            
Sbjct: 288 EVRLLMLQTHYRAPLDFSFERLKGAQGTLARIKSCVKNLRWAAEHDSEDAGVGVGVGADG 347

Query: 346 -----------------IIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
                             ID A    +  + +D N   A+ A+  L   + K  D     
Sbjct: 348 DADAADAALEFDSAFGRTIDKAQIEFVQQMDDDFNAAGALAAIFNLVAAANKYLDA---- 403

Query: 386 NASAH------------------ILGI---------------EVCKE---HLNKNISIAI 409
            A AH                  +LGI               +V +E   +   +I  A 
Sbjct: 404 -AGAHPSVALALRAADMLCELCGVLGIALTRPVQQDLPSELLDVARELAGYEGNDIDAAQ 462

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           E L+  R      K ++ AD IR ++ + G ++ED
Sbjct: 463 EALLSARATARSNKDWARADAIRDKISALGLVVED 497


>gi|322411055|gb|EFY01963.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 447

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 174/469 (37%), Positives = 251/469 (53%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y  G K
Sbjct: 2   IKIYDTMTRSLREFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYA-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAAQAGVS-PKE-----LSDRFIAAFMEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  +Q +I  G AYE   ++ F      +Y   + + I E ++G       E
Sbjct: 114 VMDYMAEIISFVQVLISKGFAYEVAGDVYFRVEKSEHYAQLANKTISELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TSLKENPLDFALWKSAKTGEVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKGI------IDPA 350
                V+R  +    YR+PI+FT + + +AE+    L + + Q  T K           A
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTDKAIRDAEVNLKYLKNTFQQPLTEKADEQELKRFVTA 344

Query: 351 VLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              A+ +D NT + I  +  +A+     +    +   F     + GI   +E L+ +   
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTGMVKESFEKILAVFGIIFEEEVLDAD--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IE L+ +R      + F +AD +R QL ++G  L D K   +G R TR
Sbjct: 402 -IEALIAKRQEARTNRDFVTADALRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|295676873|ref|YP_003605397.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436716|gb|ADG15886.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 465

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 176/470 (37%), Positives = 254/470 (54%), Gaps = 45/470 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRAL-- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P  +
Sbjct: 60  GYNVTYVRNITDIDDKIIKRA------VENGETIKSLTDRFIAALHEDADALGIERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A++ ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEALEKNGYAYQASDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  +   HYR P++++   + +A   L++   T+      D A L      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARL-YTALKDVTPDSAALDWNEAY 344

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI----------- 394
                +A+ +D NT  A+  L +LA E  +  D  L     A   +LG+           
Sbjct: 345 AQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQQ 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        AIE  +  R+   + K +++AD IR +L   G  LED
Sbjct: 405 AAGAAAEGALEPAAIEAKIAARIAAKQAKDYAAADRIRAELLEAGVALED 454


>gi|251781692|ref|YP_002995994.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390321|dbj|BAH80780.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 447

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 172/470 (36%), Positives = 250/470 (53%), Gaps = 43/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  +    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPLTEKTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY--AGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 60  RVNYISNFTDVDDKIIKAAAQAGVS-PKE-----LSDRFIAAFMEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  +Q +I  G AYE   ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYMTEIISFVQVLIGKGFAYEVAGDVYFRVEKSEHYAQLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TSLKENPLDFALWKSAKTGEVSWDSPWGSGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS-----KGIIDP 349
                V+R  +    YR+PI+FT + + +AEI L       + P T T+     K  +  
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETANEQELKRFV-T 343

Query: 350 AVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
           A   A+ +D NT + I  +  +A+     +    +   F     + GI   +E L+ +  
Sbjct: 344 AFQDAMDDDFNTANGITVVFDMAKWINSGSYTGMVKEAFEKILAVFGIVFEEEVLDAD-- 401

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE L+ +R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 --IEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|315151334|gb|EFT95350.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 478

 Score =  289 bits (740), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 175/495 (35%), Positives = 259/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ H+GNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHLGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILTFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|59712207|ref|YP_204983.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|71657967|sp|Q5E4F1|SYC_VIBF1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|59480308|gb|AAW86095.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 461

 Score =  289 bits (740), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 170/440 (38%), Positives = 249/440 (56%), Gaps = 46/440 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +       D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GETCDALTERLIADMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--E 181
           AT +I ++I L++ +I  G AY A+N +++F+      YG  SR+ +++ + G+RV   E
Sbjct: 114 ATEYIKEIIALVERLIERGFAYVASNGDVMFEVKKYDEYGCLSRQDLEQLQAGSRVTLEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+
Sbjct: 174 ASVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLM 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDT-PYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA-------- 350
           + +  +R  ++  HYR  ++++ + L +A   L +    ++ +G+   + PA        
Sbjct: 286 YDSETVRYFLMSGHYRSQLNYSEENLNQARASLERL--YTSLRGLDLSVTPAGGEEFVGR 343

Query: 351 VLSALYNDLNTVSAIQALHKLARE----STKNHD----LLPIFNASAHILGI-----EVC 397
             +A+ +D NT  A   L ++ARE     T+N D    L  +    A +LG+     E  
Sbjct: 344 FSTAMNDDFNTPEAYSVLFEMAREVNRLKTENIDTASKLGALMRELADVLGLLSQEPEAF 403

Query: 398 KEHLNKNISIA-IEKLVQER 416
            +  + N  +A IE L++ R
Sbjct: 404 LQGGSSNDDVAEIEALIKAR 423


>gi|257088530|ref|ZP_05582891.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|256997342|gb|EEU83862.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
          Length = 470

 Score =  289 bits (740), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 258/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|254526663|ref|ZP_05138715.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538087|gb|EEE40540.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 489

 Score =  289 bits (740), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 194/509 (38%), Positives = 262/509 (51%), Gaps = 80/509 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  IV+DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDDV-VKIYCCGVTVYDLCHLGHARSYIVWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E  S+        ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEESSSMKE------VSEKNIIEFHKDMDSLGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMAND 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+       +
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRELI-------K 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDP--- 349
           S  +P+ +R  ++  +YR+P+DFT + L  A        I LS    T  +   ID    
Sbjct: 285 SGISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKGAFRYIDKNES 344

Query: 350 ------------------AVLSALYNDLNTVSAIQALHKLAR------------ESTK-- 377
                                 AL NDLNT  AI  ++ LA+            E  K  
Sbjct: 345 IEEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKID 404

Query: 378 -NHDLLPIFNAS-----AHILGIEVCKEHLNKNISIAIEK---LVQERLILLKMKKFSSA 428
            N     I N         +LG+E  KE L K   I  E+   L+ ERL   K K ++ A
Sbjct: 405 LNEKFFLIENFKTLKKLTKVLGLE--KEVLVKESKITEEEILSLINERLKAKKGKNYAKA 462

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           D IR  L  KG  L      D  + +T W
Sbjct: 463 DEIRNLLNEKGIEL-----IDQSKEITTW 486


>gi|281355430|ref|ZP_06241924.1| cysteinyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281318310|gb|EFB02330.1| cysteinyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 471

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 173/471 (36%), Positives = 248/471 (52%), Gaps = 46/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ +NT++RK+  FQ ID   +RMY CGPTVY+FAHIGN R  +  D+L R L Y+    
Sbjct: 3   LQFFNTMDRKVVPFQPIDAKLVRMYTCGPTVYNFAHIGNFRAYMFEDLLRRTLEYF--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N+TD+DDK I  +R     +P+ +     T+K  Q F +D   L        P 
Sbjct: 61  PVRQVMNLTDVDDKTIRDSRA--ARLPLRE----FTAKYKQAFFEDLKTLNIEPAEVYPA 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT+HIPQMI LI  ++  G AY+A ++ I F     P+YG  ++   + Q+ G R+  ++
Sbjct: 115 ATDHIPQMIRLISVLMEKGFAYQAEDKSIYFSIDKFPDYGKLAKIDRENQRSGVRIKNDE 174

Query: 183 YHKKNPADFILWKR--STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           Y K + ADF LWK       +  W+SPWG+GRPGWHIECSAMSS YLG  FDIH GG+D 
Sbjct: 175 YAKDSVADFALWKAWDENDGDVAWDSPWGKGRPGWHIECSAMSSEYLGDQFDIHTGGIDN 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHE+EIAQS  A   +K  N W+H   L + G KMSKS GNF T+ +L +      +
Sbjct: 235 MFPHHEDEIAQSEAASG-KKWVNYWLHCAHLMVNGEKMSKSLGNFFTLRDLQQ------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGI-IDPAV 351
            W    IR  ++  HYR+ ++FT + L +A   L ++ +          T  G  I   V
Sbjct: 288 GWKGREIRWVLIGAHYRKKLNFTFEALEQARETLGRFDEFFQRMREIAQTGDGTEISQTV 347

Query: 352 -------LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILG 393
                   +A+ +DLN   A+ A+  L R + +  D           +L  F     I+G
Sbjct: 348 AGAEQAFAAAMGDDLNISEALAAMFDLQRAANRLADAGELTAAGGAEVLAAFRKFDRIIG 407

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    +     +  L + R+   K K F  +D +R ++   GFI+ED
Sbjct: 408 CFEVDAVKTEEFPAEVTALAEARIEARKAKNFVESDRLRDEIAGLGFIVED 458


>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
 gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
          Length = 497

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 176/500 (35%), Positives = 247/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++  G
Sbjct: 17  REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHV-G 75

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYV+N TD+DDKII  +  E  S         I ++    + +    L        
Sbjct: 76  YK-VTYVQNFTDVDDKIINTSNGEGVSW------DTIANRYIDSYFEVMDALGVQRADIY 128

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +I  +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 129 PRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVD 188

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 189 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 248

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 249 PHHENEIAQSEGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 301

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---- 350
               +R  +L THYR P+DF+ +RL EA   L +                G  D A    
Sbjct: 302 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQHLL 361

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------------IF 385
                      +A+ +D NT  A  ++  LA+E    +  +                 IF
Sbjct: 362 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQTVTGREGVVCQEAIAEVKRIF 421

Query: 386 NASAHILGI-EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++GI E   E      +   E+L+Q     R      K+++ AD IR +L   G 
Sbjct: 422 KFMTEVIGILEKAWEGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIRDRLAEIGI 481

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED  +P       RWK++
Sbjct: 482 TIED--SPQGA----RWKKR 495


>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|171769386|sp|A7HDA1|SYC_ANADF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 482

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 181/502 (36%), Positives = 260/502 (51%), Gaps = 72/502 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I +TL     E Q I+P  IR Y CGPTVYD AH+G+ R  +V+D++ R LR    E 
Sbjct: 3   IVISDTLTGTKRELQPIEPGKIRFYACGPTVYDSAHVGHGRSYVVWDLVVRHLRARGYE- 61

Query: 65  CVTYVRNITDIDDKIIERA--RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V YVRN TD+DDKII RA  R+E P          + ++  ++F +D   L  L P   
Sbjct: 62  -VRYVRNFTDVDDKIIRRATERREDPVA--------LAARYAREFDEDMDALGNLRPDVA 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+ + H+PQ++ +I +++  G AY A N ++ F   + P+YG  S+R +D+   G RV  
Sbjct: 113 PKVSEHVPQIVAMISSLVEKGFAYAAANGDVYFSVRAFPDYGRLSKRNLDDLLSGARVEP 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+  +LG   D+HGGG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPTWDSPWGGGRPGWHIECSAMTLAHLGVPIDLHGGGKDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANI----WIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           FPHH NEIAQS  A    +TA      W+H+GF+ ++  KMSKS GNF T+ ++L   KF
Sbjct: 233 FPHHTNEIAQSAAAVGDGRTAESFCRHWMHHGFVEIDSEKMSKSLGNFFTLRDVL--AKF 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STS 343
                 A  +RL  L THYR PI+++   L EAE  L+ + +T                 
Sbjct: 291 -----DAEGVRLFYLGTHYRNPINYSDAILAEAERRLNYFYETLEKVDALAEGTSPAGEG 345

Query: 344 KGIIDPAVLSALYNDLNT-------VSAIQALHKLA----RESTKNHDLLPIFNASAHIL 392
            G+++ A   AL +D N          A  A + LA    +++ ++   L  F      +
Sbjct: 346 GGVVEDA-RRALDDDFNAPQVLAVLAEAFTAANALADKRGKKTPEDRARLAAFARDVREI 404

Query: 393 GIEVC---------------KEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLE 436
           G  +                +    + I  A +E  + ER    + + F+ +D IR  L 
Sbjct: 405 GTTLGLVQRRPAEALRAIRARAAARRGIDPASVEAKIVERAEARRARDFARSDAIRDALL 464

Query: 437 SKGFILEDYKNPDNGQRMTRWK 458
           ++G  L D      G + T WK
Sbjct: 465 AQGVALMD------GPQGTTWK 480


>gi|256618484|ref|ZP_05475330.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256598011|gb|EEU17187.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
          Length = 470

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 173/492 (35%), Positives = 256/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKTFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +           +  +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|194468084|ref|ZP_03074070.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452937|gb|EDX41835.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 470

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 171/480 (35%), Positives = 259/480 (53%), Gaps = 61/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +  G K
Sbjct: 2   LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFK-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K    F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAAEQGITVPQ------LAEKYINAFMEDTAAINIEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I ++I  +Q +I  G+AY  + ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 174 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A+  +K    W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 234 EFPHHENEIAQS-EAETGQKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------------KWPQTSTSKG 345
            +     V+R  M  T YR PI ++   LT A+  L+             +       +G
Sbjct: 287 -KEVDPQVLRFFMATTQYRRPIQYSQANLTAAQNNLNHIQTAFDNLTYREQDADEGDVQG 345

Query: 346 IIDP------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           + D         ++A+ +D+N  + I  +++L + +      +     + ++  I+  K+
Sbjct: 346 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYAN-----VYAQQDNVNLGAIQAIKK 400

Query: 400 HLNKNISI---------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            L + +SI                I++L++ER +  K K F+ +D IR  L+ +G ILED
Sbjct: 401 ELVELMSIFGVKLEASDNQINDEKIKQLIEERNVARKNKDFARSDEIRDNLKKQGIILED 460


>gi|170699316|ref|ZP_02890365.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170135808|gb|EDT04087.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 465

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 175/472 (37%), Positives = 250/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA +        + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRALEN------GETIKSLTDRFIGAMHEDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D+NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHAQRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454


>gi|157413680|ref|YP_001484546.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|187629843|sp|A8G5S9|SYC_PROM2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157388255|gb|ABV50960.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 489

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 193/509 (37%), Positives = 261/509 (51%), Gaps = 80/509 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  IV+D+L R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDDV-VKIYCCGVTVYDLCHLGHARSYIVWDILRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E  S+        ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEESSSMKE------VSEKNIIEFHKDMDSLGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMAND 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+       +
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRELI-------K 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDP--- 349
           S  +P+ +R  ++  +YR+P+DFT + L  A        I LS    T  +   ID    
Sbjct: 285 SGISPMSLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKGAFRYIDKNES 344

Query: 350 ------------------AVLSALYNDLNTVSAIQALHKLAR------------ESTK-- 377
                                 AL NDLNT  AI  ++ LA+            E  K  
Sbjct: 345 IEEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKID 404

Query: 378 -NHDLLPIFNAS-----AHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSA 428
            N     I N         +LG+E  KE L K   I    I  L+ ERL   K K ++ A
Sbjct: 405 LNEKFFLIENFKTLEKLTKVLGLE--KEVLVKESKITEEEISSLINERLKAKKGKNYAKA 462

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           D IR  L  KG  L      D  + +T W
Sbjct: 463 DEIRNLLNEKGIEL-----IDQSKEITTW 486


>gi|229577911|ref|YP_002836309.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284996496|ref|YP_003418263.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|228008625|gb|ACP44387.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284444391|gb|ADB85893.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 470

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 175/488 (35%), Positives = 258/488 (52%), Gaps = 66/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRL- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++            + I +  T+ ++   ++L      
Sbjct: 60  -KGYTVIRVQNITDIDDKIIKKSQD------TGKDWNEIVNYYTKDYLDMLSQLKVKIDI 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 113 H-PRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            ++  KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDP--------- 349
           + W   V+R   L +HYR PIDF+ + L +A+  L +   + +  + II           
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 350 -------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
                        +  +A+ ND +T +A+  +H++ R       +      S   LG  +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRL------VFSTLQYSRDFLGAML 395

Query: 397 CKEHLNKNISI-----------------AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             E L++   +                  I+ +V  R  L +MK +  +D IR++L   G
Sbjct: 396 AFEALSQFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAG 455

Query: 440 FILEDYKN 447
             + D K+
Sbjct: 456 VRILDSKD 463


>gi|78779620|ref|YP_397732.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|109894919|sp|Q319Z9|SYC_PROM9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78713119|gb|ABB50296.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 489

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 195/509 (38%), Positives = 264/509 (51%), Gaps = 80/509 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDDV-VKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E  S+        ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEESSSMKE------VSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---KMGTRVPE 181
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ   K G    E
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINKQGRMANE 172

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           + +KK NP DF LWK++   EP ++SPWGRGRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENNKKQNPQDFALWKKAKNDEPFFDSPWGRGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+       +
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELI-------K 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDP--- 349
           S  +P+ +R  ++  +YR+P+DFT + L  A        + LS    T  +   ID    
Sbjct: 285 SGISPMTLRYFVMTVNYRKPLDFTEEALRSAAEAWKNINLALSFMDLTKGAFRSIDKNES 344

Query: 350 ------------------AVLSALYNDLNTVSAIQALHKLAR------------ESTK-- 377
                                 AL NDLNT  AI  ++ LA+            E  K  
Sbjct: 345 IEEEYKEKLSFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRIEGLKID 404

Query: 378 -NHDLLPIFNAS-----AHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSA 428
            N     + N         +LG++  KE L K   I    I  L+ ERL   K K ++ A
Sbjct: 405 LNEKFFLLENFKTLEKLTEVLGLK--KEVLVKERKITEEEISSLINERLKAKKGKNYAKA 462

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           D IR  L+ KG  L      D  + +T W
Sbjct: 463 DEIRNLLKEKGIEL-----IDQSKEITTW 486


>gi|139474431|ref|YP_001129147.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134272678|emb|CAM30949.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 447

 Score =  289 bits (739), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 170/462 (36%), Positives = 252/462 (54%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV-PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G   R+  E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRIDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + L +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKALHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|159899627|ref|YP_001545874.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892666|gb|ABX05746.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 466

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 176/472 (37%), Positives = 246/472 (52%), Gaps = 45/472 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  +   ++ MYVCGPTVY  AHIG+A   +VFDV+ R L +     
Sbjct: 3   LAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEW--SGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RA ++       D + +  S  T  F+    +L  L  T  PR
Sbjct: 61  TVRHVMNFTDVDDKIIRRANEQG-----RDPMELAESY-TLAFLDQLGQLNVLPATAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  IPQ+I  I+ +I    AY A+N ++ F   +  +YG  SRR +D+ + G R+    
Sbjct: 115 VSTTIPQIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRAVDDMRSGARIAPDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP WESPWG+GRPGWHIECSAMS H L +  DIHGGG DLIFP
Sbjct: 175 AKDDPLDFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A +W+HNG L L G KMSKS GN ITI++ L           
Sbjct: 235 HHENEIAQTESLTG-KNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEHS------- 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIIDP 349
           A ++RL +L   YR P+ +  + L + +  L +               P   T   I+  
Sbjct: 287 ADIMRLLVLSGSYRAPLVYNDEVLADTQRKLERIMSALKPAHGTATNGPVVETLNAIVAK 346

Query: 350 A---VLSALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASAH------ILGIEV 396
           A     +A+ +D N+ +A+  L  L R      D      P     A       +LG+ +
Sbjct: 347 APADFRAAMDSDFNSAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAAVLGLRL 406

Query: 397 CKEHLNK-NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                +K + +  IE L++ R  L K K+++ +D +R +L      LED  N
Sbjct: 407 EAPSASKTDAAPFIELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPN 458


>gi|19746854|ref|NP_607990.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|24418689|sp|Q8NZD1|SYC_STRP8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19749094|gb|AAL98489.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 447

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 169/462 (36%), Positives = 250/462 (54%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++E+L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHEMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|197334356|ref|YP_002156417.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197315846|gb|ACH65293.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 460

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 169/440 (38%), Positives = 249/440 (56%), Gaps = 46/440 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 1   MKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +       D   L    P  +PR
Sbjct: 60  -LTFVRNITDIDDKIIKRAAEN------GETCDALTERLIADMHADFDALNMKRPDVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--E 181
           AT +I +++ L++ +I  G AY A+N +++F+      YG  SR+ +++ + G+RV   E
Sbjct: 113 ATEYIKEIVALVERLIERGFAYVASNGDVMFEVKKYDEYGRLSRQDLEQLQAGSRVTLEE 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+
Sbjct: 173 ASVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLM 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L         
Sbjct: 233 FPHHENEIAQSCCAHDT-PYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------H 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPA-------- 350
           + +  +R  ++  HYR  ++++ + L +A   L +    ++ +G+   + PA        
Sbjct: 285 YDSETVRYFLMSGHYRSQLNYSEENLNQARASLERL--YTSLRGLDLSVTPAGGEEFVGR 342

Query: 351 VLSALYNDLNTVSAIQALHKLARE----STKNHD----LLPIFNASAHILGI-----EVC 397
             +A+ +D NT  A   L ++ARE     T+N D    L  +    A +LG+     E  
Sbjct: 343 FSTAMNDDFNTPEAYSVLFEMAREVNRLKTENLDTASKLGALMRELADVLGLLSQEPEAF 402

Query: 398 KEHLNKNISIA-IEKLVQER 416
            +  + N  +A IE L++ R
Sbjct: 403 LQGGSSNDDVAEIEALIKAR 422


>gi|227826502|ref|YP_002828281.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229583664|ref|YP_002842165.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227458297|gb|ACP36983.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228018713|gb|ACP54120.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 470

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 175/488 (35%), Positives = 258/488 (52%), Gaps = 66/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRL- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++            + I +  T+ ++   ++L      
Sbjct: 60  -KGYTVIRVQNITDIDDKIIKKSQD------TGKDWNEIVNYYTKDYLDMLSQLKVKIDI 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 113 H-PRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            ++  KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------------LLSKWPQTSTSKG 345
           + W   V+R   L +HYR PIDF+ + L +A+               ++S+ P+      
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 346 IIDP---------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
            I           +  +A+ ND +T +A+  +H++ R       +      S   LG  +
Sbjct: 342 DIKAYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRL------VFSTLQYSRDFLGAML 395

Query: 397 CKEHLNKNISI-----------------AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             E L++   +                  I+ +V  R  L +MK +  +D IR++L   G
Sbjct: 396 AFEALSQFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAG 455

Query: 440 FILEDYKN 447
             + D K+
Sbjct: 456 VRILDSKD 463


>gi|123968849|ref|YP_001009707.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|187629849|sp|A2BS39|SYC_PROMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123198959|gb|ABM70600.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 489

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 192/512 (37%), Positives = 264/512 (51%), Gaps = 86/512 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +K+  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKKVEVFKPIDDV-VKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E  S+        ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEESSSMKE------VSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---KMGTRVPE 181
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + + EQ   + G  V E
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNLQEQNINQQGRMVNE 172

Query: 182 KYHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  KK NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+       +
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELI-------K 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---PAVLS--- 353
           S  +P+ +R  ++  +YR+P+DFT + L  A      W   + +   +D    A +S   
Sbjct: 285 SGISPMTLRYFVMTVNYRKPLDFTEEALRSAS---EAWKNINVALSFMDLTKGAFISIDK 341

Query: 354 -------------------------ALYNDLNTVSAIQALHKLAR--------------- 373
                                    AL NDLNT  AI  ++ LA+               
Sbjct: 342 NESIEEKYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGF 401

Query: 374 --ESTKNHDLLPIFNA---SAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKF 425
             E  +   LL  F        +LG++  KE L K   I    I  L+ ERL     K +
Sbjct: 402 TVELNEKFFLLENFKTLEKLTEVLGLK--KEVLVKESKIKEEEISSLINERLKAKMEKNY 459

Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + AD IR  L+ KG  L      D  + +T W
Sbjct: 460 AKADEIRNLLKEKGIEL-----IDQSKEITTW 486


>gi|227829111|ref|YP_002830890.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227455558|gb|ACP34245.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 470

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 175/488 (35%), Positives = 258/488 (52%), Gaps = 66/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRL- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++            + I +  T+ ++   ++L      
Sbjct: 60  -KGYTVIRVQNITDIDDKIIKKSQD------TGKDWNEIVNYYTKDYLDMLSQLKVKIDI 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 113 H-PRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            ++  KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDP--------- 349
           + W   V+R   L +HYR PIDF+ + L +A+  L +   + +  + II           
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 350 -------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
                        +  +A+ ND +T +A+  +H++ R       +      S   LG  +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRL------VFSTLQYSRDFLGAML 395

Query: 397 CKEHLNKNISI-----------------AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             E L++   +                  I+ +V  R  L +MK +  +D IR++L   G
Sbjct: 396 AFEALSQFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKFYEISDKIREELLKAG 455

Query: 440 FILEDYKN 447
             + D K+
Sbjct: 456 VRILDSKD 463


>gi|116493238|ref|YP_804973.1| cysteinyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265298|sp|Q03E41|SYC_PEDPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116103388|gb|ABJ68531.1| cysteinyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 470

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 174/492 (35%), Positives = 257/492 (52%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNT+ R    F+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   E 
Sbjct: 2   IKIYNTMSRTKETFKPLVDHKVSMYVCGPTVYNYIHIGNARSIIAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  AR++  ++P       +  +    F +D   +     T  PR
Sbjct: 61  -VKFVSNFTDVDDKMINSAREQGITVPE------LADRYIGAFKEDVQAVNVEPATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I  +I  I +++  G AY  + ++ +       YG+ S + IDE + G        
Sbjct: 114 ATENIDDIIAFIADLMDKGFAYAVDGDVYYRARKFSKYGALSHQNIDELEQGASQHVDDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   E  W++PWG GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETARKEDPIDFALWKAAKGDEIAWKAPWGTGRPGWHIECSVMSTKYLGDTFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   ++ A  W+HNGF+ +  +  KMSKS GNF+T+++L++     
Sbjct: 234 QFPHHENEIAQS-EAKTGKQFARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLVQ----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA 350
                  V+R  M  T YR PI +T   L +A+  L K              ++G  D  
Sbjct: 288 --KINPQVLRFLMSTTQYRRPIQYTQASLQDAKNNLEKLQNAFINLNYRLQGAQGAADAT 345

Query: 351 V-----------LSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNAS 388
           V           ++A+ +D N  + I  +++ AR            + + + LL  +   
Sbjct: 346 VAEQAAQLETDFITAMDDDFNAQNGITVVYEFARLINVYSEKTAVNAEQINQLLTSYAKM 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A + GIE+ +    +N    I++LV++R      + F ++D +R QL+  G ILED   P
Sbjct: 406 AAVFGIELKQ---IENDDAEIDELVKQRDQARADRDFETSDRLRNQLKEMGVILED--TP 460

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 461 ----QGTRWRKK 468


>gi|56808516|ref|ZP_00366253.1| COG0215: Cysteinyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|209560085|ref|YP_002286557.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209541286|gb|ACI61862.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 447

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 169/462 (36%), Positives = 250/462 (54%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYIGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++E+L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHEMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|22536391|ref|NP_687242.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|77405339|ref|ZP_00782434.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|30316157|sp|Q8E1Z4|SYC_STRA5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|22533218|gb|AAM99114.1|AE014201_12 cysteinyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|77176017|gb|EAO78791.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 447

 Score =  289 bits (739), Expect = 8e-76,   Method: Compositional matrix adjust.
 Identities = 171/473 (36%), Positives = 257/473 (54%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y     
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +              + K    F++D   L     T 
Sbjct: 57  CGYQVNYISNFTDVDDKIIKGAAEAGMDTKS------FSDKFISAFMEDVAALGVKPATK 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV 179
            PR  +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G   RV
Sbjct: 111 NPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRV 170

Query: 180 P-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG 
Sbjct: 171 DGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT++++L     
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML----- 283

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             +S    VIR  +    YR+P++FT + + +AE+ L K+ + + +  I +         
Sbjct: 284 --KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNL-KYLKNTFNLPIQENANDEELEQ 340

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNK 403
              A   A+ +D NT + I  + ++A+     H    +   F     I GI   +E L+ 
Sbjct: 341 FVKAFQGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEIFGIVFQEEVLDA 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IE L+++R      + F++AD IR +L  +G  L D K   +G R TR
Sbjct: 401 D----IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTK---DGVRWTR 446


>gi|295425605|ref|ZP_06818292.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064621|gb|EFG55542.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 486

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 177/506 (34%), Positives = 267/506 (52%), Gaps = 81/506 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +K++NTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR +I FD + R   Y  
Sbjct: 10  EQAVKVFNTLSRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYR- 68

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G K V YV N TD+DDK+I  AR E+ ++P       +  +    +++DT  L     T 
Sbjct: 69  GYK-VKYVSNFTDVDDKMINEARAENTTVPK------LAERYINAYLEDTEALNVEPATL 121

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
            PRAT+ I ++I  ++ +I  G+AYE + ++ +      +YG  S + I + + G     
Sbjct: 122 HPRATHEIKEIIAFVKELIAKGYAYEVDGDVYYRAKKFADYGKLSDQNIAQLEEGASEHI 181

Query: 180 --PEKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGG
Sbjct: 182 NDTEQQRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGG 241

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
           G DL FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T+++++  
Sbjct: 242 GQDLEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDII-- 298

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------S 341
                +     V+R  M    YR  I+++   L +A+++L ++  T             S
Sbjct: 299 -----KEVDPQVLRFFMASVQYRRQINYSEDNLKQAQVILERFKNTLTNINYRLEDDTAS 353

Query: 342 TSKGIIDPAVL-------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----- 389
                +  AV         A+ +D N  +A+ A+          ++LLP+ NA+      
Sbjct: 354 QEDAALKQAVAQTKLKFEQAMDDDFNVQNALTAI----------YELLPVVNANTNLANV 403

Query: 390 ----------------HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADY 430
                           +I GI+ C + +    S     I+ LV++R    K K ++++D 
Sbjct: 404 DKTELKQFKKLLCQWLNIFGID-CDKLVATKASAEDEQIDALVKKRDEARKNKDWATSDQ 462

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTR 456
           IR+QL+  G  ++D   P  G R TR
Sbjct: 463 IREQLKKMGITIQD--TP-QGTRWTR 485


>gi|310644226|ref|YP_003948985.1| translation initiation factor if-1 [Paenibacillus polymyxa SC2]
 gi|309249177|gb|ADO58744.1| Translation initiation factor IF-1 [Paenibacillus polymyxa SC2]
          Length = 467

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 176/491 (35%), Positives = 258/491 (52%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+ R    F  ++P  ++MYVCGPTVYD+ HIGNARP+IVFDV+   L Y   + 
Sbjct: 3   LQIYNTMTRSREPFVPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I +AR+ +  +P       +  K    + +D   L   A +  PR
Sbjct: 62  -VNYVVNFTDVDDKLIRKARELNMEVPA------VAEKFIAAYHEDLAGLNVPAASINPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I++++  G+AYE + ++ + T    +YG  S + ++E + G R+     
Sbjct: 115 VTESMDLIIDFIKDLVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DF+LWK + P E  W SPWG GRPGWHIECSAM+ HYLG   DIHGGG DL FPH
Sbjct: 175 KENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE E AQS      +  +  W+HNG++ ++  KMSKS GN I + +L    K        
Sbjct: 235 HECECAQSEVITG-KPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHK-------P 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE------------------ILLSKWPQTSTSKGI 346
             +R  ML THYR P+++  + +++AE                  I L    + S    +
Sbjct: 287 EALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLAIALKGNEEVSAELQM 346

Query: 347 IDPAVLSA----LYNDLNTVSAIQALHK--------LARESTKNHDL---LPIFNASAHI 391
               +L      + +D NT  AI A+ +        L R+     +L   L  F++   +
Sbjct: 347 KLDGILQQFGEKMDDDFNTPDAITAVFEWVSEANLLLQRDVVNQAELQAVLHTFHSMNTV 406

Query: 392 LGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           L I  E  +E L+  +    E+L+ ER+   K K +  AD IR  L +KG +LE     D
Sbjct: 407 LRIYSEPSEELLDGEV----EQLIAERVEARKTKNWGRADEIRDLLATKGIVLE-----D 457

Query: 450 NGQRMTRWKQK 460
             Q M RW++K
Sbjct: 458 TAQGM-RWRRK 467


>gi|329765327|ref|ZP_08256907.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138233|gb|EGG42489.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 463

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 188/474 (39%), Positives = 256/474 (54%), Gaps = 58/474 (12%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+ +TL   +   Q +D S  +++Y+CG TVYD +HIG+AR +IVFDVL + L     E
Sbjct: 1   MKLQDTLSNSV---QTLDISKEVKIYLCGVTVYDESHIGHARTIIVFDVLRKYLESKGIE 57

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +++N TD+DDKII RA+ E      N     I+SK  + + KD   L     ++ P
Sbjct: 58  --VNFIQNFTDVDDKIINRAKLE------NTTAEQISSKYIENYYKDFDGLNVKRASNYP 109

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT HI  +   I+ +I    AY + N + F  S    YG  S++KIDE + G R+    
Sbjct: 110 KATEHIKDIENFIEKLIQKDIAYVSKNGVYFSVSKFSQYGKLSKKKIDELQSGARIEVDE 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF LWK S  ++P W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DLIFP
Sbjct: 170 AKKDPLDFALWKFSN-VKPIWDSPWGKGRPGWHIECSAMSIKYLGENFDIHGGGRDLIFP 228

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      ++ A IW+H G + + G KMSKS GN  +I  +L+       +W 
Sbjct: 229 HHENEIAQSESFTS-KQFAKIWMHVGMVTINGEKMSKSLGNIRSIKHVLD-------NWG 280

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------KGII 347
             VIRL  L  HY +PID++ + L E    L+KW Q                    K II
Sbjct: 281 PNVIRLFCLSGHYSKPIDYSEELLKEN---LTKWRQAEICFYELIHANNENSNTDIKSII 337

Query: 348 DPAVL---SALYNDLNTVSAIQALHKLARE---------STKNH--DLLPIFNASAHILG 393
           +       +AL +DLNT  A+ +  KL +E          +K H   ++P       ILG
Sbjct: 338 EKTSREFNNALESDLNTHLALSSFFKLIKEINYLAAEEKISKKHAESVIPELERMMKILG 397

Query: 394 IEVCK-EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           + + K  H  K     I  ++ ER  L K KKF  AD IR +L      L D+K
Sbjct: 398 LVIPKITHEEKQ---EINNMISEREQLRKEKKFQDADKIRDRLNEMNIELIDHK 448


>gi|33240685|ref|NP_875627.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|61216289|sp|Q7VB63|SYC_PROMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33238213|gb|AAQ00280.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 499

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 191/517 (36%), Positives = 269/517 (52%), Gaps = 83/517 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ NTL R+   F ++ P  + +Y CG TVYD  H+G+AR  IV+DVL R   Y+  + 
Sbjct: 3   LKLTNTLTRRTETFSSLKPGEVSIYCCGVTVYDLCHLGHARSYIVWDVLRR---YFIAQG 59

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +V+N TDIDDKI+ RA +E      N  ++ ++ +N ++F +D   L  L P   P
Sbjct: 60  YKVKFVQNFTDIDDKILARASKE------NCTMNEVSERNIEEFHRDMDALGILRPDRMP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPE 181
           RAT  + ++  +I+ +   G AY A  ++ F      NYG  S+R + EQ++    RV +
Sbjct: 114 RATRCLEEIKSMIEELEKKGAAYSAEGDVYFAVMKHANYGKLSKRDLSEQQLNADGRVTD 173

Query: 182 K--YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           K    K+NP DF LWK +   E  + SPWG GRPGWHIECSAM    LG+  DIH GG D
Sbjct: 174 KEEARKQNPFDFALWKAAKEGEQSFPSPWGAGRPGWHIECSAMVLQELGETIDIHLGGAD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A+  +K A  W+HNG +N+ G+KMSKS GNF TI  LL+      
Sbjct: 234 LIFPHHENEIAQSEVANG-KKLAKYWLHNGMVNVGGQKMSKSLGNFTTIRALLK------ 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLS---------KWPQ---- 339
               A  +RL +L  HYR+P+DFT + L  A        ++L           WP+    
Sbjct: 287 EGISAMTLRLFILQAHYRKPLDFTKESLDAASTGWKRLNVILCLGLMKHQTLNWPKPNIQ 346

Query: 340 ----TSTSKGIIDPAV-------LSALYNDLNTVSAIQALHKLAR--------------- 373
               TS SK  ++  +       + AL ND+NT  AI  L +LAR               
Sbjct: 347 ESKITSLSKHSLNETLNLSRQQFIDALNNDINTSVAISILFELARPLRSLSNQIENGSSE 406

Query: 374 ---ESTK--NHDLLPIFNASAHILGI--EVCKEHLNKNIS----IAIEKLVQERLILLKM 422
              ES K  ++    +    A++LG+  E+ K   +K       + I + +QER      
Sbjct: 407 LISESDKHTSYSRWLLLTELANVLGLQAELPKTRTSKQSQNLDEVLIREAIQERKDAKLS 466

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             F+ AD IR++L  KG  L D K+      +T W Q
Sbjct: 467 GDFAKADKIREELNLKGVQLIDKKDG-----VTEWIQ 498


>gi|239816065|ref|YP_002944975.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511846|sp|C5CPX0|SYC_VARPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239802642|gb|ACS19709.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 459

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 180/463 (38%), Positives = 244/463 (52%), Gaps = 40/463 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R++ EF  + P  +RMYVCG TVYD  H+G+AR MI FD++ R L+      
Sbjct: 3   LRIYNTLSRELEEFSPLQPGRVRMYVCGMTVYDLCHLGHARSMIAFDLVQRWLKA--SGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + I  +T +      +D   L    PTH+PR
Sbjct: 61  AVTYVRNITDIDDKIIRRAVEN------GETIRSLTDRMIDALHEDADALGIERPTHEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++IPQM+ +I  +   G AY A N ++ +     P YG  S + IDE   G RV    
Sbjct: 115 ATDYIPQMLSMIGTLEKKGLAYRAENGDVNYAVRKFPGYGKLSGKSIDELHAGERVAVLD 174

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P D +LWK + P EP    W S +G GRPGWHIECSAM+   LG+  DIHGGG DL
Sbjct: 175 GKDDPLDPVLWKSAKPSEPEEVKWASEFGPGRPGWHIECSAMACELLGETLDIHGGGEDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  AN W+HNGF+  +  KMSKS GNF  I ++L       +
Sbjct: 235 QFPHHENEIAQSEGATG-KPLANYWMHNGFIVTDNEKMSKSLGNFFLIRDVL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAVL 352
            + A  IR  ++  HYR P++++   L +A   L +         PQ   +    DP   
Sbjct: 287 KYDAETIRFFVVRAHYRRPLNYSDVHLDDARASLKRLYTSLDLVAPQALAAIDWNDPYAA 346

Query: 353 ---SALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHLNKN 404
              +A+  D  T  A+  L  LA E  +        LL       +IL  +  K  L   
Sbjct: 347 RFKAAMDEDFATPEAVAVLFDLAGEVNRTQSPAQAGLLKALGGCLNILQDD-PKRFLRAG 405

Query: 405 ISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ++    I+  +  R      K F+ AD IR  L ++G +L+D
Sbjct: 406 TTLDEATIQAQIDARAAAKAAKNFAEADRIRNDLLAQGIVLKD 448


>gi|229580812|ref|YP_002839211.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228011528|gb|ACP47289.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 470

 Score =  288 bits (738), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/488 (35%), Positives = 258/488 (52%), Gaps = 66/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I++YN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRVYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRL- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++            + I +  T+ ++   ++L      
Sbjct: 60  -KGYTVIRVQNITDIDDKIIKKSQD------TGKDWNEIVNYYTKDYLDMLSQLKVKIDI 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 113 H-PRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            ++  KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDP--------- 349
           + W   V+R   L +HYR PIDF+ + L +A+  L +   + +  + II           
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 350 -------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
                        +  +A+ ND +T +A+  +H++ R       +      S   LG  +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRL------VFSTLQYSRDFLGAML 395

Query: 397 CKEHLNKNISI-----------------AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             E L++   +                  I+ +V  R  L +MK +  +D IR++L   G
Sbjct: 396 AFEALSQFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAG 455

Query: 440 FILEDYKN 447
             + D K+
Sbjct: 456 VRILDSKD 463


>gi|25010277|ref|NP_734672.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77407940|ref|ZP_00784691.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|30316158|sp|Q8E7F2|SYC_STRA3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|23094629|emb|CAD45847.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77173487|gb|EAO76605.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|319744134|gb|EFV96507.1| cysteine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 447

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 171/473 (36%), Positives = 258/473 (54%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y     
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +              + K    F++D   L     T 
Sbjct: 57  CGYQVNYISNFTDVDDKIIKGAAEAGMDTKS------FSDKFISAFMEDVAALGVKPATK 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV 179
            PR  +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G   RV
Sbjct: 111 NPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRV 170

Query: 180 P-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG 
Sbjct: 171 DGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT++++L     
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML----- 283

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             +S    VIR  +    YR+P++FT + + +AE+ L K+ + + +  I +         
Sbjct: 284 --KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNL-KYLKNTFNLPIQENANDEELEQ 340

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNK 403
              A   A+ +D NT + I  + ++A+     H    +    A +L   GI   +E L+ 
Sbjct: 341 FVKAFQEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELLEIFGIVFQEEVLDA 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IE L+++R      + F++AD IR +L  +G  L D K   +G R TR
Sbjct: 401 D----IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTK---DGVRWTR 446


>gi|308171985|ref|YP_003918690.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604849|emb|CBI41220.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328551795|gb|AEB22287.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328910056|gb|AEB61652.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 466

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/488 (34%), Positives = 259/488 (53%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   + 
Sbjct: 3   ITLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       ++ +  + + +D   L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------VSERFIKAYFEDVGALGCRKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
              ++  +I  +  +I  G+AYE+  ++ F T +   YG  S++ IDE + G R+     
Sbjct: 115 VMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS       KT A  W+HNG++N++  KMSKS GNF+ +++++       + + 
Sbjct: 235 HENEIAQSEAL--TGKTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGIID------- 348
             ++R  ML  HYR PI+++ + L + +   ++             +S  + D       
Sbjct: 286 PQLLRFFMLSVHYRHPINYSEELLEKTKNAFNRLKTAYSNLNHRLISSTNLTDNDDEWLA 345

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH---DLLPIFNASAHI 391
                  A   A+ +D NT +AI     LA+        ++T +H     + +F+    +
Sbjct: 346 KIEEHRTAFEEAMDDDFNTANAISVWFDLAKLANYYMQEDNTADHVIKAFISMFDRIGSV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ + +    + +   IE+L+++R    + + F+ +D IR QL+S   ILED       
Sbjct: 406 LGLTLGE---EELVDEEIEELIEKRNEARRNRDFALSDQIRDQLKSMNIILED------T 456

Query: 452 QRMTRWKQ 459
            + TRWK+
Sbjct: 457 AQGTRWKR 464


>gi|118587321|ref|ZP_01544748.1| cysteinyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432310|gb|EAV39049.1| cysteinyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 467

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 176/488 (36%), Positives = 259/488 (53%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT   K  EF+ I P  I MYVCGPTVY++ H+GNAR  I FD + R L Y   + 
Sbjct: 2   LKVFNTATLKKEEFKPIVPGKITMYVCGPTVYNYIHVGNARSSIAFDTIRRYLLYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RA++E  S       + I SK  + F +DT  L  +  T + R
Sbjct: 61  -VNFVSNFTDVDDKIINRAQEEGVSE------NAIASKYIKAFYEDTKPLNIIPATTRTR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  IP +I  + ++I  G+AYE+  ++ F      NYG  +   +++ ++G   R+ + 
Sbjct: 114 ATEVIPDIIEFVSDLIDKGYAYESRGDVYFRVRKAGNYGLLAHENLEDLEVGASGRLDDG 173

Query: 183 YH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK        W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL
Sbjct: 174 ALALKEDPLDFALWKNEPRQVIKWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHH +E+AQS  A   ++  + W+HNGF+N+   KMSKS GNF T++ELL        
Sbjct: 234 AFPHHTDEMAQS-EAHTGKQFVHYWLHNGFVNVNNEKMSKSLGNFTTVHELLS------- 285

Query: 301 SWPAPV-IRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTST 342
           S+  P+ IR  M  THYR PI+++                  +RL  A+  +   PQ   
Sbjct: 286 SYDDPMAIRFLMTATHYRRPINYSSSELERARVELDRIRTAYRRLKNADFKIGDDPQIDQ 345

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------------ 390
                  A + A+ +D N  +A+ A+ +L R +    D   + + SA             
Sbjct: 346 LVSKQTAAFVEAMDDDFNVANALAAIFELVRLANSYVDSGDVKDKSAQEILRQIAELIGV 405

Query: 391 --ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+E  KE L K I + ++K    R+     K +  +D +R ++ S G+ + D    
Sbjct: 406 FGISGLETKKESLPKKIELLLKKRETARI----NKNWQQSDQLRDEIFSLGYKVSD---S 458

Query: 449 DNGQRMTR 456
            NGQ++ +
Sbjct: 459 SNGQQVRK 466


>gi|323214246|gb|EFZ99004.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 310

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 147/324 (45%), Positives = 203/324 (62%), Gaps = 17/324 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRL 327
           A  +R  ++  HYR  ++++ + L
Sbjct: 286 AETVRYFLMSGHYRAKLNYSEENL 309


>gi|320105196|ref|YP_004180787.1| cysteinyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319752478|gb|ADV64238.1| cysteinyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 497

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 181/514 (35%), Positives = 249/514 (48%), Gaps = 81/514 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++NTL +     + ++P  +RMYVCGPTVY  +H+G+    ++FD L R L Y   + 
Sbjct: 3   IHLHNTLSQTKEPLRTLEPGKVRMYVCGPTVYSASHVGHMVGPVIFDTLKRFLTYRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITDIDDK+I +A ++  ++        +  + T  +VK    L      H P+
Sbjct: 62  -VTWVVNITDIDDKLIVQANKDGVTV------KSLAEQVTADYVKCLEALGVDGIDHMPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  ++ + Q +I  G+AY +  ++ FD +    YG  S R  +    G RV    H
Sbjct: 115 ATEHIDHILEMTQGLIDKGYAYASGGDVYFDVTKAEEYGKLSHRDPEALLAGNRVEPSSH 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG GRPGWHIECSAMS   LG   DIHGGGLDL+FPH
Sbjct: 175 KRHPGDFALWKAAKPGEPFWESPWGPGRPGWHIECSAMSRSLLGDQIDIHGGGLDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+ QS C    +  A  W+HNG L  +GRK+SKS+ + I +   L  K      +  
Sbjct: 235 HENEVVQSECFTGRKPFATFWLHNGLLTKDGRKISKSDPDTIVLMRDLLGK------YQP 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------PQTSTSK 344
             +R   LM HYR P D+  QRL E E  L  +                    PQT  S+
Sbjct: 289 DTLRALFLMGHYRRPTDYGNQRLDEIERGLQAFFIFSERFERITGRSFYTLPAPQTD-SE 347

Query: 345 GIIDPA--------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA- 389
           G  DP                L AL +D NT      L +L R   +  D + +  A A 
Sbjct: 348 GEFDPGDSDFLKTIRDHRLKFLEALDDDFNTGGGFGELFELLRTLNRFADRVGLERADAP 407

Query: 390 --------HILGIEVCKEHL----------------NKNISIAIEKLVQE-RLILLKMKK 424
                      G+ V +E                  +  ++  + +LV + R  L K K 
Sbjct: 408 HRADALAQFERGVTVLRELTRLFGLFRAAPRSKTTGDDQLTAGLMRLVIDLRASLRKEKN 467

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           F+ AD IR++L      LED      G   TRW+
Sbjct: 468 FALADEIRRRLAELNVTLED------GPGGTRWR 495


>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 482

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 176/500 (35%), Positives = 245/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++  G
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHV-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYV+N TD+DDKII  +  E  S         I ++    + +    L        
Sbjct: 61  YK-VTYVQNFTDVDDKIINTSNGEGVSW------DTIANRYIDSYFEVMDALGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +I  +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS            W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---- 350
               +R  +L THYR P+DF+ +RL EA   L +                G  D A    
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQRLL 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------------IF 385
                      +A+ +D NT  A  ++  LA+E    +  +                 IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTGREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILGI-EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++GI E   E      +   E+L+Q     R      K++  AD IR +L   G 
Sbjct: 407 KFMTEVIGILEKAWEGNTGANAAEYEELMQVILSVRQACRDQKQWGLADCIRDRLSEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED  +P       RWK++
Sbjct: 467 TIED--SPQG----ARWKKR 480


>gi|50915009|ref|YP_060981.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|61216145|sp|Q5X9W5|SYC_STRP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50904083|gb|AAT87798.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 447

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 167/461 (36%), Positives = 253/461 (54%), Gaps = 40/461 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE--VCKEHLNKNIS 406
            A   A+ +D NT + I  +  +A+         P+ +A   +L +   V +E +   + 
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIVFEEEV---LE 399

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 400 VDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|15899047|ref|NP_343652.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284175285|ref|ZP_06389254.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|21264020|sp|Q97WE6|SYC_SULSO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13815580|gb|AAK42442.1| Cysteinyl-tRNA synthetase (cysS) [Sulfolobus solfataricus P2]
 gi|261600795|gb|ACX90398.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 470

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 177/491 (36%), Positives = 254/491 (51%), Gaps = 72/491 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I++YN+L RK+ EF  ++P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRVYNSLGRKLEEFGTVEPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRL- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII+++++      I    + I    T+ ++   ++L      
Sbjct: 60  -RGYTVIRVQNITDIDDKIIKKSQE------IGKDWNEIVDYFTKDYLDMLSQLKVKIDI 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T HI ++I  +Q +I  GHAY A +  + FD  + PNYG  S  K +E   G   
Sbjct: 113 H-PRVTQHIREIIDFVQRLIDKGHAYVAPSGSVYFDVDTYPNYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            ++  KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQ+      EK    W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LIFPHHENERAQTEALIG-EKWVTYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------- 352
           + W   V+R   L +HYR PIDF+ + L +A+  L +      S  II   +        
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQR---IKDSMAIIRDVISEGPKFYV 338

Query: 353 -------------------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
                              +A+ ND +T +A+  +H++ R       +      S   LG
Sbjct: 339 KDDDIKVYREILNNLNNFHTAMSNDFDTSTALSYIHEIVRL------VFSTLQYSRDFLG 392

Query: 394 IEVCKEHLNKNISI-----------------AIEKLVQERLILLKMKKFSSADYIRKQLE 436
             +  E L +   +                  I+ +V  R  L +MK +  +D IR++L 
Sbjct: 393 AMLAFETLKQFNEVFGVMDEEFYPTYDKMYKIIDAVVDIRNQLRQMKLYEISDKIREELL 452

Query: 437 SKGFILEDYKN 447
             G  + D K+
Sbjct: 453 KAGVRILDSKD 463


>gi|94989286|ref|YP_597387.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993175|ref|YP_601274.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542794|gb|ABF32843.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546683|gb|ABF36730.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 447

 Score =  288 bits (737), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 250/462 (54%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDSEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|154684612|ref|YP_001419773.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|187629789|sp|A7Z0L6|SYC_BACA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154350463|gb|ABS72542.1| CysS [Bacillus amyloliquefaciens FZB42]
          Length = 466

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 165/487 (33%), Positives = 258/487 (52%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   + 
Sbjct: 3   ITLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       ++ +  + + +D   L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------VSERFIKAYFEDVGALGCRKADLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
              ++  +I  +  +I  G+AYE+  ++ F T +   YG  S++ IDE + G R+     
Sbjct: 115 VMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGIID-------- 348
            ++R  ML  HYR PI+++ + L + +   ++             +S  + D        
Sbjct: 287 QLLRFFMLSVHYRHPINYSEELLEKTKNAFNRLKTAYSNLNHRLISSTNLTDNDEEWLAK 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH---DLLPIFNASAHIL 392
                 A   A+ +D NT +AI     LA+        ++T +H     + +F+    +L
Sbjct: 347 IEEHRTAFEEAMDDDFNTANAISVWFDLAKVANYYMQEDNTADHVIKAFISMFDRIGSVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + +    + +   IE+L+++R    + + F+ +D IR QL+S   ILED        
Sbjct: 407 GLTLGE---EELVDEEIEELIEKRNEARRNRDFALSDQIRDQLKSMNIILED------TA 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|323473579|gb|ADX84185.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323476226|gb|ADX81464.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 470

 Score =  288 bits (736), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 174/488 (35%), Positives = 258/488 (52%), Gaps = 66/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRL- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++            + I +  T+ ++   ++L      
Sbjct: 60  -KGYTVIRVQNITDIDDKIIKKSQD------TGKDWNEIVNYYTKDYLDMLSQLKVKIDI 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 113 H-PRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            ++  KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDP--------- 349
           + W   V+R   L +HYR PIDF+ + L +A+  L +   + +  + II           
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 350 -------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
                        +  +A+ ND +T +A+  +H++ R       +      S   LG  +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRL------VFSTLQYSRDFLGAML 395

Query: 397 CKEHLNKNISI-----------------AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             E L++   +                  I+ +V  R  L +M+ +  +D IR++L   G
Sbjct: 396 AFEALSQFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMRLYEISDKIREELLKAG 455

Query: 440 FILEDYKN 447
             + D K+
Sbjct: 456 VRILDSKD 463


>gi|21911208|ref|NP_665476.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896585|ref|NP_802935.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25009287|sp|Q8K5T7|SYC_STRP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21905420|gb|AAM80279.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811839|dbj|BAC64768.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 447

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 169/462 (36%), Positives = 250/462 (54%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TDIDDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDIDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|332097289|gb|EGJ02270.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 435

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 177/457 (38%), Positives = 255/457 (55%), Gaps = 48/457 (10%)

Query: 30  VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS 89
           +CG TVYD  HIG+ R  + FDV+ R LR+  G K + YVRNITDIDDKII+RA +    
Sbjct: 1   MCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK-LKYVRNITDIDDKIIKRANEN--- 55

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
               ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY A+
Sbjct: 56  ---GESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHITEIIELTEQLIAKGHAYVAD 112

Query: 150 N-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           N +++FD  + P YG  SR+ +D+ + G RV     K+NP DF+LWK S   EP W SPW
Sbjct: 113 NGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPW 172

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+H+
Sbjct: 173 GAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCA-HDGQYVNYWMHS 231

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + L 
Sbjct: 232 GMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEENLK 284

Query: 329 EAEILLSK-WPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLAREST--K 377
           +A   L + +     +   + PA         + A+ +D NT  A   L  +ARE    K
Sbjct: 285 QARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLK 344

Query: 378 NHDLLPIFNASAH------ILG-IEVCKEHLNKNISIA-------IEKLVQERLILLKMK 423
             D+      ++H      +LG +E   E   ++ + A       IE L+Q+RL   K K
Sbjct: 345 AEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAK 404

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +++AD  R +L   G +LED      G + T W++K
Sbjct: 405 DWAAADAARDRLNEMGIVLED------GPQGTTWRRK 435


>gi|227879317|ref|ZP_03997183.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|262047597|ref|ZP_06020552.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|227861086|gb|EEJ68739.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|260572173|gb|EEX28738.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 477

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/503 (35%), Positives = 268/503 (53%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E GW+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIGWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------K 344
             R     V+R  M    YR  I+++ + L +A  +L ++  T T+              
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTVTNINYRLADDTASEES 347

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+++       A+ +D N  +A+ A+          +DLLP+ NA+A+       
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAI----------YDLLPVVNANANAARADKQ 397

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G++   +C ++   N    I+ LV++R      K ++++D IR 
Sbjct: 398 ELQKFKEKLASWLLVFGVDTNKLCVKNAGSN-DDEIDALVKKRDEARANKDWATSDQIRD 456

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 457 QLKEMGITIQD--TP-QGTRWTR 476


>gi|147918862|ref|YP_687412.1| cysteinyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110622808|emb|CAJ38086.1| cysteinyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 473

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 176/479 (36%), Positives = 258/479 (53%), Gaps = 56/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL + + +FQ +D   ++MYVCGPTVYD+ H+G+AR  IVFDV+ R L Y   + 
Sbjct: 6   LRFYNTLTQTVEDFQPLDDRKVKMYVCGPTVYDYCHMGHARSYIVFDVIRRHLLYRGYD- 64

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKI++RA++      +N   + ++ K    + +D  RL  +   H PR
Sbjct: 65  -VTYVQNFTDVDDKILKRAKE------LNVDPTELSRKFIAAYFEDIDRLNVMRADHYPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-IPNYGSFSRRKIDEQKMGTRVPEKY 183
            T  +  +I +I+ ++  G+AYE+   + F     +   G  S +  D  K+G R+    
Sbjct: 118 VTEFMDPIIGIIKALVDKGYAYESMGSVYFSIDRMVSEVGVLSHQTYDSLKVGARIEVDE 177

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            K+NP DF+LWK + P E   W+SPWG+GRPGWHIEC+AMS   LG+  DIHGGG+DLIF
Sbjct: 178 RKRNPMDFVLWKAAKPGESLSWDSPWGKGRPGWHIECTAMSVKLLGEQIDIHGGGMDLIF 237

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EI QS         A  WIHNGFL +   KMSKS GNF  I ++L+        +
Sbjct: 238 PHHESEILQSEAYTGKVPFAKYWIHNGFLLVNKEKMSKSLGNFFLIRDILQ-------KY 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV----------L 352
               +R  +L T+Y+ P+DF+   L EA+  L++   T +   I D A           +
Sbjct: 291 SPETVRFFILNTNYQGPLDFSDAGLEEAKKSLARIQNTVSD--ITDRAGKTDQKGSDQDI 348

Query: 353 SALY------------NDLNTVSAIQALHKLARESTKNHDLLPIFNAS------------ 388
           SAL             N+ +T  AI  + +  R  T N  L   F+A             
Sbjct: 349 SALIAESKARFDEHMDNNFSTREAIAEIFEFTR--TVNRLLRGSFSADEAKQIAGLYDHF 406

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           ++ILGI    E     ++  + KL+ + R  + K K + ++D IR +L+  G  LED K
Sbjct: 407 SNILGIRWETEQKEDMLADELMKLIIDIRAAVRKKKDYETSDLIRSRLKDLGITLEDTK 465


>gi|119719811|ref|YP_920306.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|187631645|sp|A1RYM3|SYC_THEPD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119524931|gb|ABL78303.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 474

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 185/493 (37%), Positives = 260/493 (52%), Gaps = 65/493 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R +  F+ ++   + +YVCGPTVYD++H+G+AR  + FDV+ R LR    + 
Sbjct: 2   LRVYNTLSRSLEVFEPVEEGRVSIYVCGPTVYDYSHVGHARTYVAFDVIKRYLRLRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITDIDDKII RAR E       D   I+  + T+ +++   +L  L   H PR
Sbjct: 61  -VVHVQNITDIDDKIINRARDEG-----RDWREIV-DEYTKDYLEALQKLRVLVDVH-PR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S R   ++KM ++     
Sbjct: 113 VTEHISEIIDFVQKLIDSGHAYVAPSGSVYFDVDTYPDYGRLSGRL--DKKMWSQEEFAS 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF LWK   P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFP
Sbjct: 171 EKKNPYDFALWKARKPGEPYWDSPWGPGRPGWHIECSVMSSKYLGRRFDIHGGGTDLIFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS      +     W+H G L + G KMSKS  N + + +L        RS+ 
Sbjct: 231 HHENERAQSEALFGEKPWVKYWMHTGMLQVRGEKMSKSLKNIVPLRDLF-------RSYD 283

Query: 304 APVIRLAMLMTHYREPIDFT----------VQRL-------------TEAEILLSKWPQT 340
             V+RL +   HYR  + F+          +QRL              E E  LS W + 
Sbjct: 284 PLVVRLWLATAHYRTVLQFSDEVLEQAKSNLQRLRGAVQLLKNLAKEVEPEGRLSDW-EL 342

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKL-----ARESTKNHDLLP-----IFNAS 388
              + ++D      +++ +D N   A  A+ KL     ++ S K   LL      +F   
Sbjct: 343 GVFREMLDARREFYASMDDDFNASGAFAAVMKLTGLVYSQVSAKPTYLLVLRALRLFEEF 402

Query: 389 AHILGIEVCKEHLNKNISIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LG+      L     + +++L    V+ R  L + K +  ADYIR +L S G  L  
Sbjct: 403 NRVLGVLDEDLALGAAEVLPVDELLDLIVEVRAKLREQKNYELADYIRSKLSSLGVQL-- 460

Query: 445 YKNPDNGQRMTRW 457
               D G++ TRW
Sbjct: 461 ---MDQGEK-TRW 469


>gi|309787051|ref|ZP_07681663.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924629|gb|EFP70124.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 437

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 178/459 (38%), Positives = 254/459 (55%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K + YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK-LKYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY 
Sbjct: 58  -----GESFVALVDRMIAEMHKDFNALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYV 112

Query: 148 ANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
            +N +++FD  + P YG  SR+ +D+   G RV     K+N  DF+LWK S   EP W S
Sbjct: 113 VDNGDVMFDVPTDPTYGVLSRQDLDQLLAGARVDVVDDKRNTMDFVLWKMSKEGEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCA-HDGQYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + 
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284

Query: 327 LTEAEILLSK-WPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLAREST- 376
           L +A   L + +     +   + PA         + A+ +D NT  A   L  +ARE   
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 377 -KNHDLLPIFNASAH------ILG-IEVCKEHLNKNISIA-------IEKLVQERLILLK 421
            K  D+      ++H      +LG +E   E   ++ + A       IE L+Q+RL   K
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K +++AD  R +L   G +LED      G + T W++K
Sbjct: 405 AKDWAAADAARDRLNEMGIVLED------GPQGTTWRRK 437


>gi|306826617|ref|ZP_07459922.1| cysteine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431195|gb|EFM34199.1| cysteine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 447

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 250/462 (54%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|229550658|ref|ZP_04439383.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229304224|gb|EEN70220.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
          Length = 478

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 174/495 (35%), Positives = 256/495 (51%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITPPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPI 384
                      ++   ++ + +D N  + I  +++LA+   +  +           +  +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|326693476|ref|ZP_08230481.1| cysteinyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 470

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/490 (36%), Positives = 256/490 (52%), Gaps = 57/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+   F+ + P  + MYVCGPTVY++ HIGNAR  I FDV+ R   Y     
Sbjct: 2   IQVYNTLSREKEVFKPLTPGKVSMYVCGPTVYNYIHIGNARSAIAFDVIRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR+E       D ++I  +K    F  DT  L     T + R
Sbjct: 60  TVKYVSNFTDVDDKIIKRAREEGV-----DEMTI-ANKYADAFHADTLPLNIKPATIRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT  IP +I  +Q++I  G+AYE+  ++ F       YG  + + + E            
Sbjct: 114 ATEVIPDIITFVQDLIDKGYAYESAGDVYFRAKQFKGYGILAHQDLTEMAANAAGRLDDA 173

Query: 181 EKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF +WK S   +   W SPWG GRPGWHIECS MS  YLGK  D+HGGG+D
Sbjct: 174 EQIRKEDPIDFAVWKASRDTDKISWASPWGNGRPGWHIECSVMSQKYLGKTIDVHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS  A   +K  N W+HNGF+N++  KMSKS GNF T++++L       
Sbjct: 234 LAFPHHTNEIAQS-EARTGQKFVNYWLHNGFVNVDNEKMSKSLGNFTTLHDMLT------ 286

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTST 342
             +  P+ IR  +  THYR PI++    L +A   L +                  Q + 
Sbjct: 287 -DYDDPMAIRYLLATTHYRRPINYAPDTLAQARAALERIRTGYRNLQFRLADAVPGQDTA 345

Query: 343 SKGIIDPAVLS---ALYNDLNTVSAIQALHKLAR------ESTKNHD-----LLPIFNAS 388
            +  I   V +   A+ +D N  +A+ A+ +L        E+T  +D     LL      
Sbjct: 346 LETTIQQQVEAFELAMDDDFNVPNAVAAIFELITLANTYAEATTVYDNTVKTLLTTIETL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI+        ++++   +L+  R I    + + ++D +R QL++ G I+ED   P
Sbjct: 406 MGVLGIDGLSG--TSDLTVEQRRLIDARAIARTSQDYQTSDELRDQLKTLGIIIED--TP 461

Query: 449 DNGQRMTRWK 458
             GQR  R K
Sbjct: 462 -QGQRWHRAK 470


>gi|172061028|ref|YP_001808680.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|229558620|sp|B1YSM8|SYC_BURA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171993545|gb|ACB64464.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 465

 Score =  288 bits (736), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 175/472 (37%), Positives = 249/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDIDDKII RA +        + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIDDKIIRRALEN------GETIKSLTDRFIGAMHEDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   + P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVQPDALALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D+NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHAQRFAAAMNDDINTPVAVATLFELAGEVNRTCDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454


>gi|289679397|ref|ZP_06500287.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 299

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 145/314 (46%), Positives = 196/314 (62%), Gaps = 17/314 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYR 317
             V+R  ++ +H R
Sbjct: 286 PEVVRYLLVSSHSR 299


>gi|29374703|ref|NP_813855.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|61216301|sp|Q839V5|SYC_ENTFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29342161|gb|AAO79927.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
          Length = 470

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 174/492 (35%), Positives = 258/492 (52%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +L +  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLEETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++      
Sbjct: 234 FPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI---- 346
                 ++R  M  T YR PI ++   L EA     K         + Q      +    
Sbjct: 290 ----PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PIFNA 387
                   ++   ++ + +D N  + I  +++LA+       ++T +  +L     +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED--T 460

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 461 PQG----TRWRR 468


>gi|76787565|ref|YP_328938.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77410936|ref|ZP_00787292.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|109894950|sp|Q3K3G5|SYC_STRA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|76562622|gb|ABA45206.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77162991|gb|EAO73946.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 447

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/473 (35%), Positives = 256/473 (54%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y     
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +              + K    F++D   L     T 
Sbjct: 57  CGYQVNYISNFTDVDDKIIKGAAEAGMDTKS------FSDKFISAFMEDVAALGVKPATK 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV 179
            PR  +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G   RV
Sbjct: 111 NPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRV 170

Query: 180 P-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++   G   DIHGGG 
Sbjct: 171 DGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEIFGDTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT++++L     
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML----- 283

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             +S    VIR  +    YR+P++FT + + +AE+ L K+ + + +  I +         
Sbjct: 284 --KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNL-KYLKNTFNLPIQENANDEELEQ 340

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNK 403
              A   A+ +D NT + I  + ++A+     H    +   F     I GI   +E L+ 
Sbjct: 341 FVKAFQGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEIFGIVFQEEVLDA 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IE L+++R      + F++AD IR +L  +G  L D K   +G R TR
Sbjct: 401 D----IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTK---DGVRWTR 446


>gi|313889588|ref|ZP_07823232.1| cysteine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122015|gb|EFR45110.1| cysteine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 447

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 168/468 (35%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + I MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLKENQISMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +   S P       +  K  + F+ DT  L     +  PR
Sbjct: 60  HVNYISNFTDVDDKIIKAAAEAGIS-P-----KALADKFIEAFMADTKELGIKPASQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  +Q +I  G AYE+  ++ F  +   NY   + + + + ++G       E
Sbjct: 114 VMDYMGEIIAFVQALIQKGFAYESAGDVYFRVTKSENYARLANKTLADLEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPW +GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKPGEISWDSPWSKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS  A   +  AN W+HNGF+ ++  KMSKS GNF+T++E+LE       S
Sbjct: 234 FPHHTNEIAQS-EAKTGQTFANYWMHNGFVKVDNEKMSKSLGNFVTVHEMLE-------S 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID--PAV 351
               ++R  +    YR+PI+FT + + +AE+ L     T        S +  + D   + 
Sbjct: 286 VDGQILRFFLATQQYRKPINFTEKAIRDAEVNLKYLKNTYLLPLQTGSDTSRLFDFKKSF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D N  + I  +   A+     H    +   F     + GI   +E L+ +    
Sbjct: 346 KEAMDDDFNAANGITVIFDFAKWINSGHYDQTVKTAFGEMLEVFGIVFQEEVLDSD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +E L+ ER      + F+ AD IR  L S+G  L D K   +G R TR
Sbjct: 402 VEALIAERQAARAARDFTKADSIRDHLASQGIKLLDTK---DGVRWTR 446


>gi|256849116|ref|ZP_05554549.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256713892|gb|EEU28880.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 477

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 179/503 (35%), Positives = 268/503 (53%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E GW+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIGWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------K 344
             R     V+R  M    YR  I+++ + L +A  +L ++  T T+              
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTVTNINYRLAYDTASEES 347

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+++       A+ +D N  +A+ A+          +DLLP+ NA+A+       
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAI----------YDLLPVVNANANAARADKQ 397

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G++   +C ++   N    I+ LV++R      K ++++D IR 
Sbjct: 398 ELQKFKEKLASWLLVFGVDTNKLCVKNAGSN-DDEIDALVKKRDEARANKDWATSDQIRD 456

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 457 QLKEMGITIQD--TP-QGTRWTR 476


>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
          Length = 561

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 178/539 (33%), Positives = 267/539 (49%), Gaps = 118/539 (21%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY--- 60
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y    
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGFE 80

Query: 61  ---------------------------YGEKCV---------TYVRNITDIDDKIIERAR 84
                                      Y  +C+          ++  I D+  KII+RA 
Sbjct: 81  IIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIIKRAN 140

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +        DA+S+ +S+   +F +D   L CL PTH+PR T HI Q+I LI  I+ +G 
Sbjct: 141 EAG-----EDALSL-SSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGK 194

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           AY    ++ F   + P+Y S S RK+D+ + GTRV     K+NPADF LWK +   EP W
Sbjct: 195 AYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSW 254

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           ESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFPHHENE+AQS  A   E     
Sbjct: 255 ESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAA-YPESEVKC 313

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID--- 321
           W+HNGF+N +G+KM+K++ NF TI +++         +    +RL ++ THYR  ++   
Sbjct: 314 WMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YHPMALRLFLMRTHYRSDVNHSD 366

Query: 322 -----------FTVQRLTEAEILLSKWPQTSTSKGIIDPA------------VLSALYND 358
                      +  Q L + E  +S + +      I  PA             L  + +D
Sbjct: 367 TALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSI--PADDQKLIEENRSNFLEKMSDD 424

Query: 359 LNTVSA---------------------------------IQALHKLARESTKNHDLLPIF 385
           L+T +A                                 IQAL  L  E T    +L + 
Sbjct: 425 LHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLM 484

Query: 386 NASAHILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
             S+  L  ++  + L +    A  +++++++R +  K K F+ +D IR +L + G  L
Sbjct: 485 PMSS--LAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIAL 541


>gi|148642328|ref|YP_001272841.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
           35061]
 gi|148551345|gb|ABQ86473.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
           35061]
          Length = 448

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 177/466 (37%), Positives = 250/466 (53%), Gaps = 44/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+TL R    F+ ++ + I ++VCGPTVYD AHIG+ R  I FD + R   + Y   
Sbjct: 1   MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRY--WEYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII+R+++    IP  D    I  K  +++++D  +L         R
Sbjct: 59  TVFYIQNITDVDDKIIKRSKE--TGIPAGD----IAKKFEKRYIEDMAKLNVTGVNLFAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+ ++I  IQ +I  G AYE  + + F   +   +G  S R I+E +    +  K  
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFKEFGKLSNRNIEELESHREIA-KTT 171

Query: 185 KKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           KKNP DF LWK R    EP W SPWG GRPGWHIE +A++ +Y G  +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EI Q           N W+H GFLN+ G KMSKS  NFITI ELL       + + 
Sbjct: 232 HHEAEITQMEAVSGKSPMVNYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAV---------- 351
           A V R  +L THYR PIDF+ + L ++E  L K  +   S    II+ A           
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENATSDYAPLKIAK 344

Query: 352 ---LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---------HILGIE-VCK 398
                ++ +D NT  AI A+  L  +S    D L   + SA          ILGI+ V K
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVSAIREFLDDVGFILGIDFVLK 404

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +  + +  + +   V++   L   K++  +D IR QL   G+ + D
Sbjct: 405 DTGSSDELLTLISDVRQE--LRNNKQYELSDKIRNQLTDLGYEISD 448


>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 489

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 172/511 (33%), Positives = 263/511 (51%), Gaps = 77/511 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K+ EF  ++P  + +Y CG TVYD +H+G+ R +IVFD   R L +   + 
Sbjct: 1   MKIHNTLTGKVEEFVPVNPPKVLIYTCGVTVYDDSHVGHGRSLIVFDTFRRFLEHLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA++E       D ++I  ++    + +D   +       +PR
Sbjct: 60  -VTFVRNFTDVDDKIINRAKEE-----CTDFMTI-ANRYIASYYRDMEAIRVKPADVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+ +++ +IQ++I  G+AYE++ ++ F   S  +YG  S+R  +E + G RV     
Sbjct: 113 VTEHMKEIVDVIQSLIEKGYAYESDGDVYFSVRSFKDYGKLSKRSPEEMEAGARVEPSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL+FPH
Sbjct: 173 KRDPLDFALWKSAKAGEPSWDSPWGKGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HNG + + G+KMSKS GN++T+ E+          +  
Sbjct: 233 HENEIAQAEAVTG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLKEIY-------TKYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA--------------EIL--LSKWPQTSTSKGIID 348
            ++RL +L THYR P+DF+ +++ E               E+L  L   P    +  + D
Sbjct: 285 DILRLLVLFTHYRSPLDFSWEKMEETQRAYDRLKGAIEDYEVLKELEVIPGKGGAHPLYD 344

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARE--STKNHDLLP----------------- 383
                  +   +L +D NT  A+  +  L  E    KN                      
Sbjct: 345 KVKEVEESFFESLSDDFNTPEALSHIFSLVSELGKVKNRTYSEGKIDESELGAYEYASRF 404

Query: 384 IFNASAHILGI-----------EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSAD 429
           + N    I G+            V +  L     +    ++ L++ R +  + K+F  AD
Sbjct: 405 LLNTLKKIFGLLEDLYPECEVRRVVERELEAGEVLDTKLVDLLIEVRTLARQEKQFRIAD 464

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L+  G  LED   P      TRWK++
Sbjct: 465 LIRDRLKELGIELED--TPAG----TRWKKR 489


>gi|332992532|gb|AEF02587.1| cysteinyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 460

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 170/481 (35%), Positives = 255/481 (53%), Gaps = 49/481 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  R   +F  +    + +YVCG TVY+ +H+G+AR  + FD+L R LR+   + 
Sbjct: 2   LHLYNTRTRDKAKFVPLQEGKVGLYVCGITVYNLSHMGHARTYLSFDILVRYLRHLGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        +    +T +      +D   +  L P  +P 
Sbjct: 61  -VKYVRNITDIDDKIIARANEN------GETFEALTKRTIGMMHEDFAAINLLEPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + H+  +I +I+ ++  G AY+A+N +++FD S  P YG  S++ +D+ + G+RV    
Sbjct: 114 VSGHMDDIIDIIKILMDKGFAYQASNGDVLFDVSKFPEYGKLSKQDLDQLQSGSRVEVAL 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP W+SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 DKNDPLDFVLWKPAKAGEPAWQSPWGEGRPGWHIECSAMNKKHLGAHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEK-TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENE+AQSCCA   +K   N+W+H G + ++  KMSKS GNF T+ ++L+         
Sbjct: 234 HHENEVAQSCCA--FDKPYVNVWMHAGMVQVDDEKMSKSLGNFFTLRDVLQEHD------ 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVL 352
            A  +R  ++  HYR  + ++   +T+A+  L +             T  S G       
Sbjct: 286 -AETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVTVDESTDLSYGGYLARFE 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHL---- 401
           +A+ +DLN   A   L  +ARE  +N D       L  +      ILG+           
Sbjct: 345 AAMNDDLNVPEAFSVLFDVAREINRNKDNAEEASKLAAVLKGLGAILGMLQSDPDAYLKG 404

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N + +  IE L+++R      K +++AD  R  L +K  +LED      G   T W+
Sbjct: 405 GSENDDEAAEIEALIKQRNDARAAKDWAAADAARDALNAKNIVLED------GPAGTTWR 458

Query: 459 Q 459
           +
Sbjct: 459 R 459


>gi|325958959|ref|YP_004290425.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330391|gb|ADZ09453.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 467

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 173/483 (35%), Positives = 256/483 (53%), Gaps = 59/483 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT+ R+   F+ I+ + ++++VCGPTVYD++HIG+AR  I FDV+ R ++Y     
Sbjct: 2   IKLYNTMTRRKEIFEPIEGNRVKLFVCGPTVYDYSHIGHARTYISFDVIVRYMKY--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+NITD+DDKI++RA +   S P+      +  +  +++++D   L         R
Sbjct: 60  SVFYVQNITDLDDKILKRADELETS-PLE-----LARRYEEKYLRDMELLGVEHVNLYAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+++  I  ++  G+AYE +  + FD S   ++G  S R +++  +  R+     
Sbjct: 114 ATEHIPEIVRQIGVLVDKGYAYETDKGVYFDESKFEDFGKLSNRNLEDLNV-HRIGPDSS 172

Query: 185 KKNPADFILWKR----STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K+NP DF LWK+    S   E  W+SPWG GRPGWHIE +A++  Y G  +DIHGGGLDL
Sbjct: 173 KRNPGDFALWKKRERISEEQEMIWDSPWGTGRPGWHIEDTAITETYFGPQYDIHGGGLDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE EIAQ   +  I+     W+H GFLN++G KMSKS GNFITINELLE       
Sbjct: 233 IFPHHEAEIAQMEASSGIKPMVRYWMHTGFLNVKGEKMSKSLGNFITINELLE------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRL----------------------TEAEILLSKWP 338
            +   V R  +L THYR PIDF+ + L                      ++  I L    
Sbjct: 286 EYSPEVFRFFVLSTHYRSPIDFSSEILHQSSQGLNRIYKLIEKINSELDSDTNISLDNDS 345

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-HD----------LLPIFNA 387
                   +      A+ ND NT +AI  +  L R+  ++ H+          L  I   
Sbjct: 346 DYIQKLAAVREEFFEAMDNDFNTPAAISTIFDLIRDVNRDIHESNISKNSLTKLKAIIIE 405

Query: 388 SAHILGIEVCKE----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             ++LG++   E       +   + + K V+E+  L + K +  +D IR +L      LE
Sbjct: 406 FGYVLGLDFSMEPENEENLEVELLDLLKYVREK--LRQNKNWELSDQIRDRLNELNITLE 463

Query: 444 DYK 446
           D K
Sbjct: 464 DKK 466


>gi|297563235|ref|YP_003682209.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847683|gb|ADH69703.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 467

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 168/472 (35%), Positives = 244/472 (51%), Gaps = 49/472 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++ Y+T  R++ EF  +      +Y+CG TV    HIG+ R  + FD+L R L +   +
Sbjct: 2   SLRFYDTSARQVREFVPLREGAASLYLCGATVQAPPHIGHIRSGVNFDILRRWLTHLGYD 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+ RN+TDIDDKII  A  E   +P       ++ +N + F      L CL PT +P
Sbjct: 62  --VTFCRNVTDIDDKIIRVASDE--GVPWWQ----VSERNQRAFTHAYEILGCLPPTVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           RAT H+P+MI L+  +I  GHAY A++   ++ FD  S P YG  S +++D+        
Sbjct: 114 RATGHVPEMIDLMHRLIDAGHAYAASDGSGDVYFDVRSYPPYGGLSNQRLDQVVESADCD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK + P EP W +PWGRGRPGWH+ECSAM++ YLG  FDIHGGGLDL
Sbjct: 174 ADRDKRDPRDFALWKGAKPGEPSWHTPWGRGRPGWHLECSAMATKYLGPSFDIHGGGLDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE+AQS  A   +  A  W+HNG L + G KMSKS GN + I +++   +    
Sbjct: 234 VFPHHENELAQSRAAG--DGFAQYWLHNGLLVVGGEKMSKSLGNSLLIPQMVRKVR---- 287

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----GIIDPAV---- 351
               PV +R  +   HYR  ID++   L EA     +     T      G + PA     
Sbjct: 288 ----PVELRYYLGQVHYRSVIDYSDAALQEAATAYQRIEGFLTRAVEVLGEVAPAADVPA 343

Query: 352 --LSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEH 400
              SAL +DL    A+  +H   RE           +  ++         +LG++   E 
Sbjct: 344 EFASALNDDLGVSQALAVVHGHVREGNTALAAGGKEQAAEIAGELRTMLGVLGLDPLGEQ 403

Query: 401 --------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   L + +   +   +++R      K +++AD IR QL   G ++ED
Sbjct: 404 WATGGDQGLREVVDALVAVALEQRQAARGRKDYAAADAIRDQLAGAGVVVED 455


>gi|163791190|ref|ZP_02185607.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873521|gb|EDP67608.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 468

 Score =  287 bits (735), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 172/492 (34%), Positives = 249/492 (50%), Gaps = 63/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   F  I+   +RMYVCGPTVY++ HIGNAR  + FD + R L Y   + 
Sbjct: 2   LKIYNTLTRKKEAFIPIEEGKVRMYVCGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A++ + + P       +  K    + +DT  L     +H PR
Sbjct: 61  -VNYVSNFTDVDDKIIRTAKELNLTAPE------VADKFIAAYHEDTHALGVEEASHHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
              ++P +I  I  +I   +AYE + ++ + T    NYG  S   IDE ++G        
Sbjct: 114 VMENMPDIIDFIAVLIEKEYAYEVDGDVYYRTRKFKNYGELSDISIDELEVGASNRLNAQ 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   E  WESPWG GRPGWHIECS M++ YLG   DIH GG DL
Sbjct: 174 ENNKKEDPLDFALWKAAKEAEINWESPWGPGRPGWHIECSVMATKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A+ W+HNGF+ ++  KMSKS GNF+ +++++       +
Sbjct: 234 AFPHHENEIAQSE-AKTGHPFAHYWMHNGFVTMDNEKMSKSLGNFVLVHDII-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------WP 338
                ++R  M  T YR PI ++   + EA   L+K                        
Sbjct: 286 QVDPQILRFFMATTQYRRPISYSETTIEEARANLTKITMAFDNVTYRLKDAAAVGEDDQE 345

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
           Q S  K +     ++ + +D N+ + I  ++++A+      +           +L  F  
Sbjct: 346 QISQFK-LFKENFVTEMDDDFNSANGITVIYEMAKAMNIYSERTVVSKVVLEAMLHQFQE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              + GI   +  L   +   IE+L++ER      K F  +D IR QL+ +G IL+D   
Sbjct: 405 LVQVFGITFGETEL---LDETIEQLIEERNAARAAKNFQRSDDIRDQLKEEGIILDD--T 459

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 460 PQG----TRWRR 467


>gi|94995145|ref|YP_603243.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548653|gb|ABF38699.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 447

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 250/462 (54%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLHKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKD 440


>gi|323126489|gb|ADX23786.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 447

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 172/470 (36%), Positives = 249/470 (52%), Gaps = 43/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  +    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPLTEKTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEY--AGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 60  RVNYISNFTDVDDKIIKAAAQAGVS-PKE-----LSDRFIAAFMEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +++ ++I  +Q +I  G AYE   ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYMTEIISFVQVLIEKGFAYEVAGDVYFRVEKSEHYAQLANKTLSELEVGASGRTDVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TSLKENPLDFALWKSAKTGEVSWDSPWGSGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS-----KGIIDP 349
                V+R  +    YR+PI+FT + + +AEI L       + P T T+     K  +  
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETANEQELKRFV-T 343

Query: 350 AVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
           A   A+ +D NT + I  +  +A+          +   F     + GI   +E L+ +  
Sbjct: 344 AFQDAMDDDFNTANGITVVFDMAKWINSGFYTGMVKEAFEKILAVFGIVFEEEVLDAD-- 401

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE L+ +R      + F++AD IR QL ++G  L D K   +G R TR
Sbjct: 402 --IEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTK---DGVRWTR 446


>gi|328958761|ref|YP_004376147.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328675085|gb|AEB31131.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 468

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 170/492 (34%), Positives = 252/492 (51%), Gaps = 63/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  I+   ++MYVCGPTVY++ HIGNAR  + FD + R L Y   + 
Sbjct: 2   LKIYNTLTREKEEFVPIEEGKVKMYVCGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++      ++ +   +  K  + + +DT  L     TH PR
Sbjct: 61  -VAYISNFTDVDDKIIRTAKE------LDLSAQEVADKFIEAYHEDTHALGVEKATHHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
              ++P+++  I  +I  G+AYE   ++ + T    +YG  S   IDE ++G      V 
Sbjct: 114 VMENMPEIVDFIAVLINKGYAYEVEGDVYYRTRKFKDYGKLSDISIDELEVGASNRLTVQ 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   E  WESPWG GRPGWHIECS M++ YLG   DIH GG DL
Sbjct: 174 ENNKKEDPLDFALWKSAKAEEISWESPWGAGRPGWHIECSVMATKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A+ W+HNGF+ ++  KMSKS GN + +++++       +
Sbjct: 234 TFPHHENEIAQS-EAKTGHPFAHYWMHNGFVTMDNEKMSKSIGNVVLVHDII-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--IDPAV------- 351
                ++R  M  T YR PI +    + EA   LSK  +T+    +  +  AV       
Sbjct: 286 QVDPQIVRFFMATTQYRRPISYNETTIEEARANLSK-IKTAYDNAMYRLKDAVETETDDQ 344

Query: 352 -------------LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
                        +  + +D N+ + I  ++++A+      +           +L  F  
Sbjct: 345 EQLNQFTSFKENFIKEMDDDFNSANGITVVYEMAKAMNIYSERSVVSKVVLEAMLDQFQE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI      L   +   IE+L+++R      K F  +D IR QL+ +G IL+D   
Sbjct: 405 LVQIFGIAFAATEL---LDETIEQLIEDRNAARAEKNFQRSDEIRDQLKEEGIILDD--T 459

Query: 448 PDNGQRMTRWKQ 459
           P      TRW++
Sbjct: 460 PQG----TRWRR 467


>gi|159041398|ref|YP_001540650.1| cysteinyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920233|gb|ABW01660.1| cysteinyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 500

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 174/475 (36%), Positives = 247/475 (52%), Gaps = 45/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++NT  +   +F+ +     R YVCG T YD AH+G+AR  + FD+  R L Y     
Sbjct: 21  IMVFNTATKMTEQFRLMKAGVARGYVCGLTPYDEAHVGHARVAVFFDLFRRYLEYL--GI 78

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKIIE AR+E     IN    +  S+  ++++     L        P+
Sbjct: 79  NVRLVTNFTDIDDKIIEAARKEFGDDLINHWYEV-PSRYIKKYLDYMDALYVKRAYAYPK 137

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  M+  I  ++  G+AY A+  + FD + +PNYG FS ++I+E   G RV  +  
Sbjct: 138 VTENVQDMVKWIDELVRRGNAYVADGSVYFDVTKVPNYGEFSGQRINELIAGARVEPEPG 197

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK   P EP W+SPWG GRPGWH+EC  MSS YLG  FD HGGG DL+FPH
Sbjct: 198 KRNPLDFALWKAWKPNEPWWDSPWGPGRPGWHLECVVMSSKYLGVPFDFHGGGQDLVFPH 257

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIA +     +   A  WIH G +N+ G KMSKS GN I I+++L         + A
Sbjct: 258 HENEIAIAKVYYGLRLFARYWIHVGLVNIGGEKMSKSLGNIIPISDVLS-------KYDA 310

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------KWPQTSTSKGIIDPAVL-- 352
             +RL  L THYR+PIDF+   +   E  L           +    ++ KG  D AV   
Sbjct: 311 EAVRLYFLNTHYRKPIDFSFSGIEAMENTLRGIYASFDYLIQLMNEASEKGTSDEAVTND 370

Query: 353 ---------SALYNDLNTVSAIQALHKLAR----------ESTKNHD---LLPIFNASAH 390
                    +AL +D NT +A+  L  L+           E    +    LL + +  + 
Sbjct: 371 AFKFMVNFENALNDDFNTPAAVSELINLSNYINSRIVYQPEKVSKYSISQLLNVLSYMSQ 430

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           ILG+ + +  +N  +   I  L++ R  L + K + +AD IR++L   G +L DY
Sbjct: 431 ILGV-LNRTRINPVLVDLINTLIKVRQSLRERKLYDAADLIREELGKLGIVLGDY 484


>gi|307274057|ref|ZP_07555267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306509365|gb|EFM78425.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 478

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 175/495 (35%), Positives = 258/495 (52%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++   + P       +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKELKITAPE------VAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A      AN W+HNG++ +  +  KMSKS GNFIT++E+++   
Sbjct: 239 DLEFPHHENEIAQS-EAKTGHTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMIQKVD 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGI- 346
                    ++R  M  T YR PI ++   L EA     K         + Q      + 
Sbjct: 298 -------PQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL----PI 384
                      ++   ++ + +D N  + I  +++LA+       ++T +  +L     +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I  +    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFCLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
              P      TRW++
Sbjct: 468 --TPQG----TRWRR 476


>gi|115352164|ref|YP_774003.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322791|sp|Q0BDV4|SYC_BURCM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115282152|gb|ABI87669.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 465

 Score =  287 bits (734), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 174/472 (36%), Positives = 250/472 (52%), Gaps = 49/472 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR   G
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITDI+DKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 61  YR-VTYVRNITDIEDKIIRRA------VENGETIKSLTDRFIGAMHEDEAALGIQRPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPPGATWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------ 352
              + A V+R  ++ THYR P++++   L +A   L++     T+   ++P  L      
Sbjct: 288 --RYDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTR---LYTALKDVEPDALALDWNE 342

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNASAHIL 392
                  +A+ +D+NT  A+  L +LA E  +  D                +       L
Sbjct: 343 PHAQRFAAAMNDDINTPVAVATLFELAGEINRTRDASLARQLKQLAGLLGLLGREPRAFL 402

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        +  IE  +  R+   + K ++ AD IR +L   G  LED
Sbjct: 403 QQATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALED 454


>gi|256848164|ref|ZP_05553608.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715224|gb|EEU30201.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 469

 Score =  286 bits (733), Expect = 3e-75,   Method: Compositional matrix adjust.
 Identities = 170/485 (35%), Positives = 257/485 (52%), Gaps = 72/485 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--YYG 62
           +KIYNTL R   EF  + P  + MYVCGPTVY++ HIGNAR  I FD + R L +  Y+ 
Sbjct: 2   LKIYNTLTRTKEEFHPVHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFIGYH- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+ AR++  ++P       +  K  + F++DTT +     T  
Sbjct: 61  ---VNYVSNFTDVDDKMIKAAREQEITVPE------LADKYIRAFLEDTTAVNIEPATMH 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT++IP++I  IQ +I  G+AY  + ++ +      +YG  S + ID+ ++G      
Sbjct: 112 PRATDNIPEIIKFIQRLIQRGYAYAVDGDVYYRARKFKHYGQLSGQSIDDLEVGASEHVS 171

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K +P DF LWK + P E  W+SPWG GRPGWHIECS MS+ YL    DIH GG 
Sbjct: 172 ADEVNKKADPMDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTKYLADTIDIHAGGQ 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T+++++    
Sbjct: 232 DLEFPHHENEIAQSEAATG-KKFVNYWMHNGFVTIGKDNEKMSKSLHNFVTVHDII---- 286

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKG-- 345
              +     V+R  M  T YR PI ++   L +A+  L+         ++ +   + G  
Sbjct: 287 ---KHVDPQVLRFFMATTQYRRPIQYSEDNLVDAQNNLAHIQTAFNNLEYRKNDATDGDD 343

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKL-------------ARESTKN-----H 379
                       + + A+ +D+N  + I  +++L             A+++  N      
Sbjct: 344 TTVANQLATFRSSFIEAMDDDINVQNGIAVVYELVKFANRYTEKETVAKDAIGNIQKLLK 403

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           +LL IF       G ++  E         I++L+ +R    + K F+ +D IR  L+++G
Sbjct: 404 ELLLIFGVKLTATG-QIDDE--------TIKQLIAKRDEARRQKNFALSDQIRDDLKAQG 454

Query: 440 FILED 444
            I+ED
Sbjct: 455 IIIED 459


>gi|292670589|ref|ZP_06604015.1| cysteine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647755|gb|EFF65727.1| cysteine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 475

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 172/481 (35%), Positives = 251/481 (52%), Gaps = 58/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGE 63
           + +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L R  Y  
Sbjct: 2   LTVYNTMTRKKEEFHPLRTGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRFLSRKGY-- 59

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y++N TD+DDKII  A +E  +         I+ +    + K    L        P
Sbjct: 60  -RVRYIQNFTDVDDKIINAANREGVTW------KEISDRYIAAYFKAMDALNVRRADVFP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R +  + ++I +I+ +I  G AY     ++ +   +  +YG  S R +++ + G RV   
Sbjct: 113 RVSETMAEIIRMIETLIERGFAYVTGAGDVYYRVEAFAHYGRLSGRSLEDMEAGARVEVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+VFD HGGG DLIF
Sbjct: 173 ETKEHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEVFDFHGGGNDLIF 232

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQ+  C D  EK A  W+HNGF+ ++  KMSKS  NF T+ ++L       + 
Sbjct: 233 PHHENEIAQAEPCIDGDEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSA 354
           +P  VIR  +L THYR P+DF+ +RL EA+  L +         + S+ +G  D A   A
Sbjct: 286 FPGEVIRFFILQTHYRSPLDFSDERLHEAQAALDRLHNVHDVIVEFSSREGTADTAAELA 345

Query: 355 LYNDL-------------NTVSAIQALHKLARESTKNHDLLP---------------IFN 386
              +              NT  AI  +  LA+E  + H  +                 F 
Sbjct: 346 AQAETFLHDFDAAMDDDFNTALAISQMFGLAKEINRYHQEVERGTSFDAANFKKAADAFY 405

Query: 387 ASAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             A I+GI   +E +  +  +A   ++ ++  R      K ++ AD IR  L++ G ++E
Sbjct: 406 TMAEIIGI-FEQEEMVADDGLADALMDIIIGIRQEARAAKNWAVADKIRDGLKNAGVVIE 464

Query: 444 D 444
           D
Sbjct: 465 D 465


>gi|255994717|ref|ZP_05427852.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993430|gb|EEU03519.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 462

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 172/473 (36%), Positives = 256/473 (54%), Gaps = 54/473 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+  +  EF  I+     +YVCGPTVY+F H+GNARP++VFD L R L Y  G +
Sbjct: 1   MKIYNTMTGEKEEFVPINEGEANIYVCGPTVYNFFHLGNARPLVVFDCLRRYLEYI-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII +AR+E   I  N+    ++    +++ +D   L     +  P+
Sbjct: 60  -VNFVQNFTDVDDKIINKAREE--GITANE----VSINYIKEYFQDAKALNVREASLHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I+ +I  G AYE + ++ + T +   YG  S + IDE + G R+  +  
Sbjct: 113 VTENMSDIIAFIEKLITKGFAYEVDGDVYYKTRAFSEYGKLSHQNIDELEAGARINIEEK 172

Query: 185 KKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           K +P DF LWK R  P E  WESPWG GRPGWHIECSAM+  +LG   DIH GG DL FP
Sbjct: 173 KHDPLDFALWKARKEPDEIAWESPWGLGRPGWHIECSAMAQKFLGDTIDIHAGGRDLCFP 232

Query: 244 HHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQS  C  R    A  W+HNG++ +   K+SKS GNF T+ ELLE  +F G + 
Sbjct: 233 HHENEIAQSEACTGR--PFARYWMHNGYITMNKEKVSKSKGNFFTVRELLE--EFDGET- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
               +R  +L  HYR PI+F+ + + +A+  L +  +   +         +G +    ++
Sbjct: 288 ----LRFFLLQGHYRNPIEFSKELIYQAKAGLDRIRRAKENLQYIIENGHEGEVSEDCIN 343

Query: 354 AL-----------YNDLNTVSAIQALHKLA-------RESTKNHDLLPI--FNASAHILG 393
            L            +DLNT  AI  + ++         ++ K +  L +      ++ILG
Sbjct: 344 QLNKRIDSFKMHMEDDLNTADAITDIFEMVTDINSQLEKNGKEYARLALSKLQEVSNILG 403

Query: 394 IEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +  E + +N+ I    L  ER    K K F  AD +R ++   G+ ++D
Sbjct: 404 FLQGEGTEEIPENVKI----LADERQEARKNKDFKRADELRDEVLKLGYEIKD 452


>gi|116491535|ref|YP_811079.1| cysteinyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290891135|ref|ZP_06554197.1| hypothetical protein AWRIB429_1587 [Oenococcus oeni AWRIB429]
 gi|122276283|sp|Q04DQ8|SYC_OENOB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116092260|gb|ABJ57414.1| cysteinyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290479099|gb|EFD87761.1| hypothetical protein AWRIB429_1587 [Oenococcus oeni AWRIB429]
          Length = 467

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 176/488 (36%), Positives = 258/488 (52%), Gaps = 59/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT   K  EF+ I P  I MYVCGPTVY++ H+GNAR  I FD + R L Y   + 
Sbjct: 2   LKVFNTATLKKEEFKPIVPGKITMYVCGPTVYNYIHVGNARSSIAFDTIRRYLLYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RA++E  S       + I SK  + F +DT  L  +  T + R
Sbjct: 61  -VNFVSNFTDVDDKIINRAQEEGVSE------NAIASKYIKAFYEDTKPLNIIPATTRTR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  IP +I  + ++I  G+AYE+   + F      NYG  +   +++ ++G   R+ + 
Sbjct: 114 ATEVIPDIIEFVSDLIDKGYAYESQGGVYFRVRKAGNYGLLAHENLEDLEVGASGRLDDG 173

Query: 183 YH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK        W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL
Sbjct: 174 ALALKEDPLDFALWKNEPRQVIKWDSPWGQGRPGWHIECSVMSTKYLGYTIDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHH +E+AQS  A   ++  + W+HNGF+N+   KMSKS GNF T++ELL        
Sbjct: 234 AFPHHTDEMAQS-EAHTGKQFVHYWLHNGFVNVNNEKMSKSLGNFTTVHELLS------- 285

Query: 301 SWPAPV-IRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTST 342
           S+  P+ IR  M  THYR PI+++                  +RL  A+  +   PQ   
Sbjct: 286 SYDDPMAIRFLMTATHYRRPINYSSSELERARVELDRIRTAYRRLKNADFKIGDDPQIDQ 345

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------------ 390
                  A + A+ +D N  +A+ A+ +L R +    D   + + SA             
Sbjct: 346 LVSKQTAAFVEAMDDDFNVANALAAIFELVRLANSYVDSGDVKDKSAQEILRQIAELIGV 405

Query: 391 --ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+E  KE L K I + ++K    R+     K +  +D +R ++ S G+ + D    
Sbjct: 406 FGISGLETKKESLPKKIELLLKKRETARI----NKNWQQSDQLRDEIFSLGYKVSD---S 458

Query: 449 DNGQRMTR 456
            NGQ++ +
Sbjct: 459 SNGQQVRK 466


>gi|124028047|ref|YP_001013367.1| cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978741|gb|ABM81022.1| Cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 490

 Score =  286 bits (733), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 184/483 (38%), Positives = 246/483 (50%), Gaps = 61/483 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT   K+ EF+ + P  +RMYVCGPTVYD+ H+G+AR  + FD + R LR      
Sbjct: 15  IRVRNTFGGKLEEFKPLRPGLVRMYVCGPTVYDYTHLGHARTYVAFDAIKRYLRLR--GY 72

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITDIDDKII RAR+E       D   I+ +     F  +  R   +     PR
Sbjct: 73  NVYHVQNITDIDDKIINRAREEG-----KDWREIVETYAKDYF--EGLRALRIKIDMHPR 125

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+HI ++I  I+ +I  G+AY A +  + F+    P+YG  S R   E+        K 
Sbjct: 126 VTSHIREIIEFIEGLIDKGYAYVAPSGSVYFEVDKYPDYGRLSGRFHPEEWRQEEDVLK- 184

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF LWK   P EP WE+PWGRGRPGWHIECS M+S YLG  FDIHGGG DLIFP
Sbjct: 185 EKKNPYDFALWKAWKPGEPYWEAPWGRGRPGWHIECSVMASRYLGDQFDIHGGGQDLIFP 244

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS      +     W+H G+L + G KMSKS GN I + E L       + W 
Sbjct: 245 HHENERAQSEAYFGKKPWVRYWLHTGYLTIRGEKMSKSLGNIIPLREAL-------KKWS 297

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQT--STSKGI 346
              +RL +L  HYR  +DF+ + L +A+  L +                PQ+    S+  
Sbjct: 298 PETLRLWILSAHYRTQLDFSEESLEQAKANLRRLRGALQGLQRIIEEVDPQSRLGDSEAK 357

Query: 347 IDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           +   VL+       A+ ND NT  A+ A  KL +  T N ++LP  N +A IL      E
Sbjct: 358 LVNTVLTLYKEFHEAMSNDFNTSRALAAALKLVK--TVNAEILPAENYTAAILAYRTLLE 415

Query: 400 -----------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                               K +   ++ +V+ R  L   K +  AD IR +L   G  L
Sbjct: 416 FNEVFAVLDDIVYGVAQQAQKLVGKLVDLIVKVRAELRARKMYELADNIRAELGELGIKL 475

Query: 443 EDY 445
            DY
Sbjct: 476 YDY 478


>gi|260584970|ref|ZP_05852714.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157400|gb|EEW92472.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 470

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 170/494 (34%), Positives = 255/494 (51%), Gaps = 65/494 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+  EF+ ++P  ++MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IQVYNTLTRQKEEFKPLEPGIVKMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A  E    P       ++ K  + F +DT  L     T  P 
Sbjct: 61  -VNYVSNFTDVDDKII-KAANETGMTP-----EEVSKKYIEAFYEDTAALNVKKATLNPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
             N +  +I  ++ ++    AYE+  ++ F T    +YG  S + I + ++G    T   
Sbjct: 114 VMNTMDDIIAFVEALVEKEAAYESGGDVYFITEKFKDYGKLSDQSIQDLQVGASQRTESA 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K+NP DF LWK + P E  W+SPWG+GRPGWHIECS M++ +LG   DIHGGG DL
Sbjct: 174 DDAKKRNPLDFALWKSAKPGEISWDSPWGKGRPGWHIECSVMATKHLGDTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKT----ANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
            FPHHENEIAQS       KT    A  W+HN F+ +  +G KMSKS GNF+ +++++  
Sbjct: 234 AFPHHENEIAQSES-----KTGHPFARYWMHNAFVTMGEDGEKMSKSLGNFVLVHDII-- 286

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAVLS 353
                +     ++R  +   HYR P+ F+   L EA   +SK   T S ++  ++ AV S
Sbjct: 287 -----KEIDPQILRFFLASAHYRRPLKFSESSLQEATANVSKIQTTFSNTRYRLEQAVES 341

Query: 354 --------------------ALYNDLNTVSAIQALHK--------LARESTKNHDLLPIF 385
                                + +D N  + +  L++        L RE      L  + 
Sbjct: 342 LEDDQDVWASFEALEGKFQEEMDDDFNAANGMTVLYQFVKEWNVYLEREIVSRVILEKLL 401

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             +  +  I   KE   + +   I+ L+ ERL   K K F+ +D IR+ L+++G +LED 
Sbjct: 402 EKAEQLFAIFGMKEVQEELVDDDIQALIDERLEARKAKNFARSDEIRELLKAQGIVLED- 460

Query: 446 KNPDNGQRMTRWKQ 459
                  + TRW++
Sbjct: 461 -----TAQGTRWRR 469


>gi|311741770|ref|ZP_07715581.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314776|gb|EFQ84682.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 468

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 166/473 (35%), Positives = 245/473 (51%), Gaps = 50/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +Y+T  R+   F  + P  + +Y CG TV    HIG+ R  +VFDVL R L     E
Sbjct: 2   SLHLYDTATRRTAAFVPVTPGQVSIYHCGLTVQGPPHIGHIRKEVVFDVLRRWLERSGLE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT V N+TDIDDKII + R++            +   N +        L C  PT++P
Sbjct: 62  --VTIVANVTDIDDKIIAKGREQ------GRPWFAVAYANERALHAAYEVLGCQPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           RAT H+P+M+ +I  +I  GHAY A ++   + FD  S P YG+ SR+ +D+ +     P
Sbjct: 114 RATGHVPEMVEMIATLIERGHAYPATDDSGDVYFDVRSWPEYGALSRQSVDDMQPAEDAP 173

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K++  DF LWK     +P    W +PWGRGRPGWH+ECSAM+  YLG  FDIHGGG
Sbjct: 174 PA-GKRDARDFALWKGHKAGDPDSASWTTPWGRGRPGWHLECSAMAGKYLGHEFDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENE+AQS  A   ++ A IW+HN  LNL G KM+KS GN + ++E++     
Sbjct: 233 LDLRFPHHENELAQSRAAG--QRFARIWMHNAMLNLGGSKMAKSVGNTLMVSEVV----- 285

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------DPA 350
             R  P   +R  +L  HYR  I+F+ + L EA     +     T    +       DP 
Sbjct: 286 --RRVPPIALRYYLLAAHYRSVIEFSEESLAEAATAFERIAGFVTRAAELVGPGEPGDPT 343

Query: 351 V--LSALYNDLNTVSAIQALHK---------LARESTKNHDLLPIFNASAHILGIE---- 395
              ++A+ +DL+  +A+ ALH           A  S +  ++L    A   +LG++    
Sbjct: 344 AEFVAAMDDDLSVPAALAALHATIGDGQRLLAAGSSPELREVLASVRAMLDVLGVDPLSP 403

Query: 396 ----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  +  ++ +   +  L+++R      + F +AD +R QL + G  +ED
Sbjct: 404 VWSGATDDSTDQALDTLVGALLEQRTEARAAQDFQTADRVRDQLTAAGVEIED 456


>gi|320530264|ref|ZP_08031333.1| cysteinyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137479|gb|EFW29392.1| cysteinyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 475

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 175/498 (35%), Positives = 253/498 (50%), Gaps = 68/498 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGE 63
           + +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L R  Y  
Sbjct: 2   LTVYNTMTRKKEEFHPLKEGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLARKGYR- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y++N TD+DDKII  A +E  +         I+ +    +      L        P
Sbjct: 61  --VRYIQNFTDVDDKIINAANREGVTW------KEISDRYIAAYFTAMDALNVHRADVFP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R +  +  +I ++  +I  G+AY  +  ++ +      +YG  S R +D+ + G R+   
Sbjct: 113 RVSETMEDIIRMVGTLIARGYAYATSEGDVYYSVEKFAHYGRLSGRSLDDMEAGARIEIN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIF
Sbjct: 173 ETKRHPMDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIF 232

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQ+  C D  EK A  W+HNGF+ ++  KMSKS  NF T+ ++L       + 
Sbjct: 233 PHHENEIAQAEPCIDGHEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPAVLSA 354
           +P  VIR  +L THYR P+DF+ +RL+EA+  L++   T       S  +G  D A + A
Sbjct: 286 FPGEVIRFFILQTHYRSPLDFSDERLSEAQAALARLSHTKEVIDELSGCEGTADTAAVLA 345

Query: 355 L-------------YNDLNTVSAIQALHKLARESTKNHDLLP---------------IFN 386
           +              +D NT  A+  +  L++E  +    L                 + 
Sbjct: 346 VQAKEFLAAFDAAMDDDFNTALALSQMFGLSKEINRYRQELERGAAFDAAHFAEAASAYR 405

Query: 387 ASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             A I+GI         + L   +   I  L Q+  +    K ++ AD IR +L+  G +
Sbjct: 406 TMAEIIGIFEQETAAASDGLADGLMDIIIGLRQDARV---QKNWALADRIRNELKEHGVV 462

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           LED   P       RWK+
Sbjct: 463 LED--TPTG----VRWKR 474


>gi|88608185|ref|YP_506222.1| cysteinyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|109894911|sp|Q2GE74|SYC_NEOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88600354|gb|ABD45822.1| cysteinyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 507

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 151/344 (43%), Positives = 203/344 (59%), Gaps = 16/344 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K++++NTL     EF  +    +RMYVCGPTVYD  HIGN R  +V+D++YR+L   + E
Sbjct: 2   KLRVHNTLSGLKEEFFPLSSEVVRMYVCGPTVYDVPHIGNIRASVVYDIVYRVLLKLFPE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKII  A          D +++        F +    L CL+PT +P
Sbjct: 62  --VIYVRNITDVDDKIITAASVRGVKC---DKVAL---HYEHIFHEHLGLLNCLSPTVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I +MI +IQ +I +G+AY     + FD  S   YG  S+RK ++   G RV +  
Sbjct: 114 KATQNIGKMISMIQALIDNGNAYSVGGNVYFDVGSFAEYGVLSKRKKEQLVYGVRVEKDV 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DFILWK    +   W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL FP
Sbjct: 174 DKKHPGDFILWKSDDHVY--WPSPWGNGRPGWHIECSAMTLATLGADFDIHGGGADLKFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS CA+   + A  W+HNGFL + G KMSKS GN + ++ L+E+         
Sbjct: 232 HHENERAQSMCANPGSQFARYWVHNGFLTVNGEKMSKSLGNVVNVDTLVES------GVT 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
             VIR  ++ THY +P+D+    + EA   L K+       G++
Sbjct: 286 PNVIRFVLISTHYSKPLDWNDAMVGEAINSLIKFKLALLDSGVL 329


>gi|91070080|gb|ABE11005.1| cysteinyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           ASNC612]
          Length = 489

 Score =  286 bits (732), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 188/512 (36%), Positives = 260/512 (50%), Gaps = 86/512 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDDV-VKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E  S+        ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEESSSMKE------VSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMANN 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+       +
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELI-------K 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
           S  +P+ +R  ++  +YR+P+DFT + L  A      W   + +   +D           
Sbjct: 285 SGISPMTLRYFVMTVNYRKPLDFTEEALRSAS---EAWKNINVALSFMDLTKGAFRFINK 341

Query: 351 ----------------------VLSALYNDLNTVSAIQALHKLAR--------------- 373
                                    AL NDLNT  AI  ++ LA+               
Sbjct: 342 NESIEEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGF 401

Query: 374 --ESTKNHDLLPIFNA---SAHILGIEVCKEHLNKNISIAIEK---LVQERLILLKMKKF 425
             +  +   LL  F        +LG++  KE L K   I  E+   L+ ERL   K K +
Sbjct: 402 KIDLNEKFFLLENFKTLEKLTEVLGLK--KEVLVKESKITEEEISMLINERLKAKKEKNY 459

Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + AD IR  LE KG  L      D  + +T W
Sbjct: 460 TKADEIRNLLEEKGIEL-----IDQSKAITTW 486


>gi|71904305|ref|YP_281108.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|109894951|sp|Q48RA7|SYC_STRPM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71803400|gb|AAX72753.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 447

 Score =  286 bits (731), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 168/462 (36%), Positives = 249/462 (53%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F+ AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFAIADAIRDQLAAQGIKLLDTKD 440


>gi|238855655|ref|ZP_04645955.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664903|ref|ZP_05865754.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282933604|ref|ZP_06338973.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238831721|gb|EEQ24058.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561386|gb|EEX27359.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302259|gb|EFA94492.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 473

 Score =  286 bits (731), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 180/479 (37%), Positives = 253/479 (52%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 1   MKIYNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  +    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEGITVPE------LAKRYINAFMEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  I  +I  I+ +I  G AYE + ++ +       YG  S + I   + G        
Sbjct: 113 ATEEIKDIIAFIKTLIEKGFAYEVDGDVYYRAKKFTGYGKLSDQDIASLEEGASQHVNEA 172

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF LWK+     E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EFAKKEDPIDFALWKKQKQSDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  + +KMSKS  NF+T++++L+    
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKDEQKMSKSLHNFVTVHDILK---- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGII 347
             R  P  V+R  M    YR+PI+++ + L +A I+L K   T          + S+   
Sbjct: 288 --RVDPQ-VLRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLKETNSQENQ 344

Query: 348 DPAVL---------SALYNDLNTVSAIQALHKLARESTKN-----HDLLPIFNASAH--- 390
           D  +           A+ +D N  +A+  ++ L     KN      DL  +     H   
Sbjct: 345 DLTIAIEDSENRFKEAMDDDFNVQNALSVVYDLLPVINKNISEDTSDLSALRKFLQHLEK 404

Query: 391 ---ILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              I G+++ K    K  +    IE+LV++R    K K F+++D IR QL     IL+D
Sbjct: 405 WLAIFGVDIDKLTTEKVSDDDAEIEELVKKRDEARKNKDFATSDTIRDQLAEMNIILQD 463


>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 482

 Score =  286 bits (731), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 175/500 (35%), Positives = 246/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++  G
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHV-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTYV+N TD+DDKII  +  E  S         I ++    + +    L        
Sbjct: 61  YK-VTYVQNFTDVDDKIINTSNGEGVSW------DTIANRYIDSYFEVMDVLGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +IQ +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK +   EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKHGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS            W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA---- 350
               +R  +L THYR P+DF+ +RL EA   L +                G  D A    
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRLL 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------------IF 385
                       A+ +D NT  A  ++  LA+E    +  +                 IF
Sbjct: 347 EKAKAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILGI-EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G+ E   E      +   E+L+Q     R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED  +P       RWK++
Sbjct: 467 TIED--SPQGA----RWKKR 480


>gi|77413794|ref|ZP_00789974.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77160156|gb|EAO71287.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 447

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 170/473 (35%), Positives = 257/473 (54%), Gaps = 49/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y     
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +              + K    F++D   L     T 
Sbjct: 57  CGYQVNYISNFTDVDDKIIKGAAEAGMDTKS------FSDKFISAFMEDVAALGVKPATK 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV 179
            PR  +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G   RV
Sbjct: 111 NPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRV 170

Query: 180 P-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG 
Sbjct: 171 DGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT++++L+    
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDMLKIV-- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
                   VIR  +    YR+P++FT + + +AE+ L K+ + + +  I +         
Sbjct: 287 -----DGQVIRFFLATQQYRKPVNFTEKAVHDAEVNL-KYLKNTFNLPIQENANDEELEQ 340

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL---GIEVCKEHLNK 403
              A   A+ +D NT + I  + ++A+     H    +    A +L   GI   +E L+ 
Sbjct: 341 FVKAFQEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELLEIFGIVFQEEVLDA 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +    IE L+++R      + F++AD IR +L  +G  L D K   +G R TR
Sbjct: 401 D----IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTK---DGVRWTR 446


>gi|256852089|ref|ZP_05557476.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661341|ref|ZP_05862254.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934881|ref|ZP_06340113.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205036|ref|ZP_06922432.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615501|gb|EEU20691.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547796|gb|EEX23773.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301062|gb|EFA93374.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149614|gb|EFH29911.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 473

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 181/490 (36%), Positives = 256/490 (52%), Gaps = 77/490 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 1   MKIYNTLTRQKEEFKPLVPGKVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  +    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEGITVPE------LAKRYINAFMEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  I  +I  I+++I  G AYE + ++ +       YG  S + I   + G        
Sbjct: 113 ATEEIKDIIAFIKDLIEKGFAYEVDGDVYYRAKKFNGYGKLSDQDIASLEEGASEHVNEA 172

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF LWK+     E  WESPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EFAKKEDPIDFALWKKQKQSDEIAWESPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L+    
Sbjct: 233 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKDEEKMSKSLHNFVTVHDILK---- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSKG 345
             R  P  V+R  M    YR+PI+++ + L +A I+L K   T            S    
Sbjct: 288 --RVDP-QVLRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLQDTDSQENK 344

Query: 346 IIDPAV-------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-------- 390
            +  A+         A+ +D N  +A+  +          +DLLPI N +          
Sbjct: 345 ALAVAIEDSENRFKEAMDDDFNVQNALSVV----------YDLLPIINKNISESTSDLSN 394

Query: 391 -------------ILGIEVCK---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                        I G+++ K   E ++ + S  IE+LV++R    K K F+++D IR Q
Sbjct: 395 LKQFLQHLENWMAIFGVDIHKLTAEKVSDDDS-EIEELVKKRDEARKHKDFATSDAIRDQ 453

Query: 435 LESKGFILED 444
           L +   +L+D
Sbjct: 454 LAAMNIVLQD 463


>gi|166365576|ref|YP_001657849.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082070|sp|B0JJL5|SYC_MICAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166087949|dbj|BAG02657.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 480

 Score =  285 bits (730), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 175/486 (36%), Positives = 259/486 (53%), Gaps = 71/486 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R+   F  + P  + MY CG TVYD+ H+G+AR  +V+DV+ R L Y  G K V
Sbjct: 5   LYNTLSRREEPFTPLIPGIVSMYCCGITVYDYCHLGHARTCVVWDVVRRYLEYL-GYK-V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++N TDIDDKI+ RA+ EH ++      + +  +  + + +D  +L        PRAT
Sbjct: 63  RYIQNFTDIDDKILNRAKNEHTTM------AAVAERFIEAYFEDMAKLGVRPADAYPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG------TRVP 180
           + +  +  L+  +   G+AY ++ ++ +      +YG  S RK+D+ + G      T  P
Sbjct: 117 HTLDGIKRLVYELEQKGYAYPSDGDVYYSVRRFSDYGKLSGRKLDDLQAGASGRVETDDP 176

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 177 EAIKKQDPFDFALWKGAKSGEPSWDSPWGQGRPGWHIECSAMVKEQLGETIDIHVGGSDL 236

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  A+ W+HNG + + G KMSKS GNFITI ELL        
Sbjct: 237 IFPHHENEIAQSEAATG-KPLAHYWLHNGMVKVAGEKMSKSLGNFITIRELLA------- 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--QTSTSKGI-----IDPAVLS 353
            +    +RL +L   YR+PIDF+ + L  A    + W   Q   S G       +PA+  
Sbjct: 289 KYDPLAVRLLILGAQYRKPIDFSDEGLQAA---TNGWHTLQEGLSFGYKHLPPDNPAITD 345

Query: 354 ---------ALYNDLNTVSAIQALHKLARE---------------------STKNHDLLP 383
                    A+ +D N    +  L ++A+E                     + K H L+ 
Sbjct: 346 QELENRFQEAVNHDFNFAGGLAVLFEIAKELRKEGNNLTHAGKTDSNLAQLAVKWHTLVK 405

Query: 384 IFNASAHILGIEVCKEH----LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +    + +LG+E+  +     +++ IS A IE L+Q+R    K K ++ +D IR +L+++
Sbjct: 406 L----SRVLGLEMAADQGETPVSEGISAADIENLIQQRTEAKKAKNYAESDRIRAELKAQ 461

Query: 439 GFILED 444
           G  L D
Sbjct: 462 GITLID 467


>gi|219848629|ref|YP_002463062.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219542888|gb|ACL24626.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 472

 Score =  285 bits (730), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 182/491 (37%), Positives = 253/491 (51%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R++   + I+P  +RMYVCG T YD AHIG+A   IVFD++ R L +   + 
Sbjct: 3   IHLYNTLTRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDMIRRYLEFRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TDIDDK+I RA Q     P+      ++ +   +F+     +  L  T  PR
Sbjct: 62  -VRHIVNFTDIDDKVIARA-QAMGQDPLA-----LSGQYAAEFLTQLQAMNVLPATAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  +P +I  +Q +I  G+AY  + ++ F      +YG  S R +DE   GTR      
Sbjct: 115 VSTTMPGIIAFVQGLIERGYAYVVDGDVYFRVKRDEDYGKLSGRSLDEMLSGTRFEVDPR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF LWK + P EP W+SPWG GRPGWHIECSAM+  YLG   DIHGGG DLIFPH
Sbjct: 175 KESPADFALWKAARPGEPAWDSPWGPGRPGWHIECSAMAMEYLGPQIDIHGGGTDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL------EGRKMSKSNGNFITINELLETKKFG 298
           HENEIAQS      +  A  W+HNG L L      +  KMSKS GN +TI + L      
Sbjct: 235 HENEIAQSESLTG-QPFARYWVHNGMLQLVNPQTRQVEKMSKSLGNVVTIADFLS----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF----TVQRLTEAEILLSKW-PQTSTSKGIIDPAV-- 351
              +   V RL +L + YR P+ +          + E LLS   P T + +    PAV  
Sbjct: 289 --RYDPDVFRLIVLSSSYRSPLTYNDEIAADNQRKLERLLSALAPATGSVRE--GPAVAA 344

Query: 352 ------------LSALYNDLNTVSAIQALHKL------ARESTKNHDLLPIFNAS----A 389
                       ++A+ ND N+ +A+ AL  L      AR++    + L I   +    A
Sbjct: 345 LREAATIARERFITAMDNDFNSPAALAALFDLVRAINAARDAGLAAEELAIGQQTLRELA 404

Query: 390 HILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +LG+ +          +   IE L++ R  L K K+++ AD +R +L   G  LED   
Sbjct: 405 GVLGLRLQPRQRTPTAEVTPFIELLIEVRGELRKAKQYALADLVRNRLADLGVALED--- 461

Query: 448 PDNGQRMTRWK 458
              G   TRWK
Sbjct: 462 ---GPHGTRWK 469


>gi|33519768|ref|NP_878600.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|61216292|sp|Q7VRB4|SYC_BLOFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33504113|emb|CAD83375.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 474

 Score =  285 bits (730), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 177/479 (36%), Positives = 254/479 (53%), Gaps = 56/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL +K   F++I    I++YVCG TVYD  H+G+AR  ++FD + R L++Y  + 
Sbjct: 2   LKIFNTLTKKKEIFKSIKCGEIKIYVCGITVYDLCHLGHARTFVIFDTILRYLKHYGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA      I  N+    + S+  Q+   D   L  L P ++P+
Sbjct: 61  -VKYVRNITDIDDKIIQRA------IKNNETTDHLASRMIQEMYLDLDILNILRPNYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+HI  +I  I+ +I   HAY  ++  ++F   ++ NYG  S  K ++      +  K 
Sbjct: 114 VTDHIELIINFIRLLIERNHAYVTSDGNVMFSIQTVYNYGVLSCHKKNQTFTQRNIRNKM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSA+S  +LGK  DIHGGG DL+FP
Sbjct: 174 IKKDPVDFVLWKTAKSGEPYWISPWGKGRPGWHIECSAISHAFLGKHIDIHGGGSDLVFP 233

Query: 244 HHENEIAQSCCADRI--EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HHENEIAQS CA  I  +   N WIH G L     KMSKS  NF TI E+++        
Sbjct: 234 HHENEIAQSTCAHHITVDSYVNTWIHTGMLTFNDEKMSKSLNNFFTIREIIQ-------K 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-IDPAVL-------- 352
           +    IR  +L  HYR+P+ ++   +  A + L      S   GI  +P V         
Sbjct: 287 YDPETIRYFLLSAHYRKPLRYSDNNIKNARLSLKHL--YSALHGINFNPIVQLYDNNSEK 344

Query: 353 -------SALYNDLNTVSAIQALHKLA--------RESTKNHDLLPIFNASAHILGI--- 394
                  + + ND N   A   L ++A        ++  +   L       A+ILGI   
Sbjct: 345 YFISKFNNKMNNDFNFPEAYSILFEMAHALNIAKIKDHVRAKSLAAHLKYLANILGILYQ 404

Query: 395 --------EVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                     C ++  +++++  I +L+  R    K K++  +D IRK+L   G ILED
Sbjct: 405 DPEIYLGYNTCIKNNKQSLTVEKIRELIYMRENARKNKEWQLSDKIRKRLTEIGIILED 463


>gi|94991232|ref|YP_599332.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544740|gb|ABF34788.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 447

 Score =  285 bits (730), Expect = 9e-75,   Method: Compositional matrix adjust.
 Identities = 167/462 (36%), Positives = 249/462 (53%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AY A+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYAADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL ++G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADVIRDQLAAQGIKLLDTKD 440


>gi|33861697|ref|NP_893258.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|61216283|sp|Q7V0W1|SYC_PROMP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33640065|emb|CAE19600.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 492

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 185/499 (37%), Positives = 265/499 (53%), Gaps = 78/499 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL + I  F+ ID   +++Y CG TVYD  H+G+AR  I +D+L R L   Y + 
Sbjct: 2   IKLFNTLSKNIEVFKPIDEV-VKIYCCGVTVYDLCHLGHARSYIAWDILRRFL--IYSDY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E      N +++ ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEE------NSSMNEVSEKNITEFHKDMDALGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I+ +   G AY    ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFIKVLEDKGFAYIRGGDVYYSVFKNKNYGKLSNQNILEQNINQQGRITTD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K+NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 173 ESNKKENPQDFALWKKAKDNEPSFDSPWGKGRPGWHIECSAMVKDELGETIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI +LL+       
Sbjct: 233 IFPHHENEIAQSESANN-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRDLLD------- 284

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQT------------ 340
           S  +P+ +R  +L  +YR+P+DFT + L  A        + LS +  T            
Sbjct: 285 SGTSPMTLRYFVLTVNYRKPLDFTDEALKSASEAWKNINVALSLFDITKKENLSIEVNET 344

Query: 341 -----STSKGIIDPAV-------LSALYNDLNTVSAIQALHKLAR---------ESTKNH 379
                 T K +I+  +        +AL NDLNT  AI  +++LA+         +  KN 
Sbjct: 345 NEFVEETYKDMINYEISQKKIKFTNALNNDLNTAGAIAIIYELAKPLKNFINQFQRIKNL 404

Query: 380 DL-----------LPIFNASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKF 425
           ++                    +LG++  KE +   N+     I  L+ +RL   K K +
Sbjct: 405 EINTNEKFHLRETFKTLEELTDVLGLK--KEEIIIDNRINEDQILSLINKRLGAKKEKDY 462

Query: 426 SSADYIRKQLESKGFILED 444
           + AD IR  L+ KG  L D
Sbjct: 463 AEADKIRNLLKEKGVELID 481


>gi|282163962|ref|YP_003356347.1| cysteinyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156276|dbj|BAI61364.1| cysteinyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 471

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 171/476 (35%), Positives = 257/476 (53%), Gaps = 49/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL  K+ +F  +    ++MYVCGPTVYD+ H+G+AR  +VFD + R L+Y  G K
Sbjct: 3   LRFYNTLASKVEDFVPLHDMEVKMYVCGPTVYDYCHMGHARAYVVFDTIRRYLQYK-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKI++RA +++  +P  +    +  K    + +D  RL  L   + PR
Sbjct: 62  -VTYVQNFTDVDDKILKRAAEQN--VPPKE----LAEKFINAYFEDMDRLNILRADYYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            + ++P +I +I+ ++  G+AY ++  + F   S+    G+ S +  D  K+G RV    
Sbjct: 115 VSQNLPAIIDMIKALVDKGYAYVSDGSVYFSVDSMSEKVGALSHQSYDALKVGARVEVDE 174

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            K+NP DF LWK S P E   WESPWG GRPGWHIECSAMS   LG   DIHGGGLDL+F
Sbjct: 175 RKRNPMDFALWKASKPGEIISWESPWGPGRPGWHIECSAMSMTTLGPNIDIHGGGLDLVF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EI Q+         A  WIHNGFL +   KMSKS GNF  + ++L  KKF     
Sbjct: 235 PHHESEIMQTEAYTGKPPFAKYWIHNGFLLVNKEKMSKSLGNFFLVRDVL--KKFS---- 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAVLSA------ 354
               +R  +L THY+ P+DF  Q L +A   L +     +     I  P   +A      
Sbjct: 289 -PDTVRFFILNTHYQSPLDFNDQALEDASRGLERIKNAISGIEARIRSPLAGAASIPGVP 347

Query: 355 -------------LYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASAH 390
                        + ++L+T  A+  + +L R+           + +  ++L ++   + 
Sbjct: 348 ERLSESKKRFEERMDDNLDTREALAEIFELTRDVNRWLAEGDMPADQWKEVLDLYGIYSD 407

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +LGI+      +   S  ++ +V  R  + K K + ++D IRK+L+  G  +ED K
Sbjct: 408 VLGIKWTGSMEDLFASELLQLIVDIRDAVRKKKDYETSDLIRKRLKELGITIEDSK 463


>gi|154151531|ref|YP_001405149.1| cysteinyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000083|gb|ABS56506.1| cysteinyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 419

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 168/444 (37%), Positives = 242/444 (54%), Gaps = 32/444 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL R +     + P  + ++VCGPTVYD++H+G+AR  +VFDVL + LR+    K
Sbjct: 1   MKLYSTLSRTVEPLVTLHPDRVALFVCGPTVYDYSHLGHARTYVVFDVLAKYLRW--NGK 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII RA++E  S       S +  K   ++++D   L   A ++  R
Sbjct: 59  EVFYLQNITDVDDKIINRAKEEGVSQ------SELARKFETEYLRDMKSLGIDAVSYYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I  ++ ++  G AY  +  + F+  +    G  S ++  ++K  +RV +   
Sbjct: 113 ATTHIPEIIDQVRRLVDKGVAYVTDTGVYFNLDTFDRNGELSGQERAKRK--SRVSDS-S 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K N  DF LWK     E  W+SPWGRGRPGWHIE +A+S  Y G+ +D+HGGGLDLIFPH
Sbjct: 170 KHNALDFALWKLGEFGEYTWDSPWGRGRPGWHIEDTAISEKYFGQQYDMHGGGLDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ    +        W+H GFL ++G KMSKS GNFITI + L+T       W  
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWLHTGFLTVKGEKMSKSLGNFITIRDALKT-------WNK 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----AVLSALYNDLN 360
            V+R ++L++HYR P+  T +    A   L      +T     D     A   A+  DLN
Sbjct: 283 DVLRYSILLSHYRSPLQATDEGFANAAKGLEHIRAIATKDKGADAEGRKAFTDAMETDLN 342

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T  AI A+ +LA     N D L        ILGI   +E      S  +  L   R  L 
Sbjct: 343 TPMAIAAIQRLA----GNGD-LEALREYGEILGINFLRES-----SAPLSVLEDIRAELR 392

Query: 421 KMKKFSSADYIRKQLESKGFILED 444
             K+F  +D IR ++ + G  + D
Sbjct: 393 AKKQFEVSDLIRDRMAAAGIHITD 416


>gi|94987050|ref|YP_594983.1| cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082155|sp|Q1MQR5|SYC_LAWIP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94731299|emb|CAJ54662.1| Cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 485

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 148/326 (45%), Positives = 197/326 (60%), Gaps = 17/326 (5%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+E+K      I    + +YVCG T YDF+HIG+AR  IVFD+L RLLRY   +  V
Sbjct: 3   LYNTMEKKKEPLIPIISGKLGIYVCGITAYDFSHIGHARSAIVFDILVRLLRYQGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T++RN TDIDDKII RA +E  S         +  +    F +D  RL  L    +P+AT
Sbjct: 61  TFIRNFTDIDDKIINRANKEGRSS------KEVAEEFINAFHEDMDRLGVLNADIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           ++IP+MI   Q ++    AY  A+ ++ F   S P+YG  S R  DE ++G R+     K
Sbjct: 115 DYIPEMIECCQKLLEADKAYITASGDVYFRVRSFPDYGKLSGRTPDELRIGVRIVPSEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK + P EP WESPWGRGRPGWHIECSAMS        DIHGGG+DLIFPHH
Sbjct: 175 EDPLDFVLWKAAKPGEPSWESPWGRGRPGWHIECSAMSEKCWPLPLDIHGGGIDLIFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQ+      +  A IW+HNG + +   KMSKS GNF  + ++LE       ++   
Sbjct: 235 ENEIAQTESIVN-KPLAKIWMHNGLVQVNSEKMSKSLGNFKIVRDILE-------AYLPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAE 331
            +R  +L  HYR PIDF+ + + E E
Sbjct: 287 TLRFFLLKKHYRSPIDFSFEGMNETE 312


>gi|121611834|ref|YP_999641.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|187631646|sp|A1WSL6|SYC_VEREI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|121556474|gb|ABM60623.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 460

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 162/393 (41%), Positives = 221/393 (56%), Gaps = 37/393 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R + EF  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+   G K
Sbjct: 3   LRIYNTLSRALEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKAR-GLK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +   +I        +T +       D   L    PT +PR
Sbjct: 62  -VTYVRNITDIDDKIIGRALERGITI------GALTDEMIAAMHADIGALGLEPPTLEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P+M+ LI  +   G AY A+N ++ +       YG  S +  DE + G RV    
Sbjct: 115 ATQYVPRMLALIGQLQAKGLAYRASNGDVNYAVRKFQGYGKLSGKSPDELRAGARVALAD 174

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK + P EP    W+S +GRGRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 175 GKTDPLDFVLWKSAKPHEPPEAQWDSDYGRGRPGWHIECSAMSCATLGESFDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS      +  A  W+HNGF+ ++  KMSKS GNF TI ++L        
Sbjct: 235 QFPHHENEIAQSEGVTG-KPLARFWLHNGFVRVDNEKMSKSLGNFFTIRDVLA------- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            + A  +R  ++  HYR  ++++   L +A   L +     T+  ++ PA +        
Sbjct: 287 QYDAQTVRFFIVRAHYRSALNYSDAHLDDARQALKR---LYTALSLVPPAPVAAIDWTEP 343

Query: 353 ------SALYNDLNTVSAIQALHKLARESTKNH 379
                 +A+  D  T  A+  L  LA E  K+H
Sbjct: 344 HAARFQAAMDEDFGTPEAVAVLFDLAVEVNKSH 376


>gi|296242820|ref|YP_003650307.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095404|gb|ADG91355.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 481

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 187/484 (38%), Positives = 266/484 (54%), Gaps = 60/484 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--R 58
           M  ++KIYNTL + + + Q ++P  ++MYVCGPTVYD  H+G+ R  +++DV  R L  R
Sbjct: 1   MLPELKIYNTLTKTVEKIQPVEPGLLKMYVCGPTVYDSTHVGHGRAYVMYDVFKRYLNSR 60

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            Y+    V +V NITDIDDKII RAR E+      D + I+ +  T+++++    L  + 
Sbjct: 61  GYH----VIHVMNITDIDDKIINRARDEN-----RDWMEIVETY-TKEYLEALNSL-NVQ 109

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
             H PR T HI ++I  IQ +I  GHAY   +  + FD ++  +YG  S R + E    +
Sbjct: 110 IDHHPRVTQHISEIIEFIQRLIEKGHAYVTPSGSVYFDVNTYEDYGRLSGRLVKEA--WS 167

Query: 178 RVPEKY-HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           + P+    KKNP DF LWK + P EP WESPWGRGRPGWHIECS MS+ YLG+ FDIHGG
Sbjct: 168 QEPDFLSEKKNPYDFALWKAAKPGEPFWESPWGRGRPGWHIECSVMSTRYLGERFDIHGG 227

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENE AQS  A       +IW+H G + +   KMSKS  N + I E++  KK
Sbjct: 228 GTDLIFPHHENERAQSESALGSRPWVSIWMHVGMVMVGADKMSKSLKNIVPIKEVV--KK 285

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK-W-----PQT 340
           +GGR+     +R   LM+HYR+P+ F+          ++RL +   LL K W     P  
Sbjct: 286 WGGRT-----LRYWYLMSHYRKPVSFSEESLEIASEHLRRLNQVSSLLQKLWREAVEPHR 340

Query: 341 STSKGI-IDPAVLSALYN-------DLNTVSAIQALHKLARESTKNHDLLP---IFNASA 389
           ++ + + I   +L A Y+       D NT  A+ +L++      ++    P   + N + 
Sbjct: 341 ASDEDLKILRNLLKAHYSFHVALSEDFNTPEAVASLNEFTTIVFRDIQYNPKYILVNTAV 400

Query: 390 HILG--------IEVCKEHL-NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            IL         +E   E L  +++   I+ LV  R  L   K +  AD IR +L   G 
Sbjct: 401 RILRDFDNVFGVLETAPEVLVEEDVDPYIKILVDVRKELRNRKMYDLADMIRSELGKLGV 460

Query: 441 ILED 444
            L D
Sbjct: 461 TLSD 464


>gi|300174046|ref|YP_003773212.1| cysteinyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888425|emb|CBL92393.1| Cysteinyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 469

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 186/497 (37%), Positives = 261/497 (52%), Gaps = 72/497 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL R+   F++I P  I MYVCGPTVY++ HIGNAR  I FDV+ R   Y   + 
Sbjct: 2   IKVYNTLTREKEIFKSIIPGKINMYVCGPTVYNYIHIGNARSSIAFDVVRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR+E       D ++I  +K    F++DT  L     T + R
Sbjct: 61  -VNYVSNFTDVDDKIIQRAREEGV-----DEMTI-ANKYANAFIEDTLPLNIQPATVRAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTRV--P 180
           AT  IP +I  +Q++I  G+AYEA  ++ F       YG  + + ++E  +    R+   
Sbjct: 114 ATEVIPDIIVFVQDLINKGYAYEAKGDVYFRAKKFKGYGILAHQDLNEMAENAAGRLNDE 173

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK +    E  WESPWG GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 174 EMTRKEDPIDFAVWKATQAEDEISWESPWGSGRPGWHIECSVMAQKYLSNTIDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NE+AQS  A   +K  N W+HNGF+N+   KMSKS GNF TI+++L       
Sbjct: 234 LAFPHHTNEMAQSE-AHTGQKFVNYWMHNGFVNVNNEKMSKSLGNFTTIHDML------- 285

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKG---I 346
           + +  P+ IRL +  T YR PI+++   LT+A + L +         +  T+   G    
Sbjct: 286 KHYDDPMTIRLLLATTQYRRPINYSSDTLTQARVALDRIRTGYRNLSFRLTNADVGKDAD 345

Query: 347 IDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK- 398
           ++ A+         A+ +D NT +A+ A+ +L          L    A   I+ IE  + 
Sbjct: 346 LESAIKKQINIFEMAMDDDFNTPNALAAVFELV--------TLANTYADNKIVKIETVQY 397

Query: 399 --------------EHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                           LN    I+ A ++L+  R+       F  +D IR+QL   G I+
Sbjct: 398 LLDTILLLLGVFGITELNDKPQITDAQKQLLAARVSARAAHDFELSDQIRQQLSESGIIV 457

Query: 443 EDYKNPDNGQRMTRWKQ 459
           ED      GQ   RW Q
Sbjct: 458 ED---TTQGQ---RWHQ 468


>gi|295692211|ref|YP_003600821.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030317|emb|CBL49796.1| Cysteinyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 477

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 178/503 (35%), Positives = 266/503 (52%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSK 344
             R     V+R  M    YR  I+++ + L +A  +L ++  T             S   
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTLTNINYRLADDTASEES 347

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+++       A+ +D N  +A+ A+          +DLLP+ NA+A+       
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAI----------YDLLPVVNANANAARADKQ 397

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G++   +C ++   N    I+ LV++R      K ++++D IR 
Sbjct: 398 ELQKFKEKLASWLLVFGVDTNKLCVKNAGSN-DDEIDALVKKRDEARANKDWATSDQIRD 456

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 457 QLKEMGITIQD--TP-QGTRWTR 476


>gi|126458659|ref|YP_001054937.1| cysteinyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|189082072|sp|A3MS54|SYC_PYRCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126248380|gb|ABO07471.1| cysteinyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 473

 Score =  285 bits (729), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 171/472 (36%), Positives = 250/472 (52%), Gaps = 42/472 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQVEEFTTYTPGLARGYVCGITPYDHVHVGHGRVYVFFDMFRRYLESLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII +AR+E           +   +   +F + + RL        PR
Sbjct: 60  -VRLVVNFTDIDDKIIAKAREEFGPEAYKRWREV-PERYIAEFFEVSKRLFIKPAYAYPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I  ++  G AY A +  + F+   +PNYG  SR++I+E   G RV  + 
Sbjct: 118 VTENVDDMVKWISALVEKGFAYVAPDGSVYFEVGKVPNYGVLSRQRIEELIAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  +P EP W SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L   K+ G +  
Sbjct: 238 HHENEIAIAKAYFGVDNFAKYWIHVGYLTVRGEKMSKSLGNVITLREVL--SKYSGEA-- 293

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSK-------------GI 346
              +RLA  M+HYR+P++F+ + L +AE     L + + + S +              G 
Sbjct: 294 ---LRLAYAMSHYRKPMEFSFELLDQAEDIVKTLYTAYDELSQAVADAGDADRERVDIGN 350

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARE--STKNHD-----------LLPIFNASAHILG 393
              A  SAL +D +T  A+Q L+  A+   ST  H            +L  +   A ++G
Sbjct: 351 FKAAFYSALEDDFSTPEAVQQLYAAAKYIISTVLHKVDKLSKNTVLAILADYVKMADVIG 410

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + +  + K +  A++ LV+ R  L   + +  ADY+R++ ++ G  L D+
Sbjct: 411 V-LERREVAKEVEEAVKALVEVRARLRSERLYQLADYVRERAKALGAELHDF 461


>gi|256546103|ref|ZP_05473456.1| cysteine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398220|gb|EEU11844.1| cysteine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 472

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 180/496 (36%), Positives = 263/496 (53%), Gaps = 64/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+  EF+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R L+Y   + 
Sbjct: 1   MKIYNTFTRQKEEFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLKYLGND- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAP-TH 121
            V YV N TD+DDKII +A        I D IS   +T K  + +++D   L      T 
Sbjct: 60  -VKYVVNFTDVDDKIINKA--------IKDKISTKEVTDKYIKAYMEDAKDLNLDEEHTI 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
            P+AT  +  +I  ++ ++    AYE+N ++ FD S   +YG  S + I++ + G     
Sbjct: 111 HPKATETMDDIIEFVKELVDKDCAYESNGDVYFDISKAKDYGHLSGKNIEDLREGASNRL 170

Query: 179 -VPEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              +K  K+NP DF LWK +    E  W+SPWG+GRPGWHIECS MS   LG+  D+H G
Sbjct: 171 DDKDKGKKRNPMDFTLWKATKKEGEVSWDSPWGKGRPGWHIECSTMSKKLLGETIDLHAG 230

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENEIAQS      +K AN W+HNG + ++G KMSKS GNF T++++     
Sbjct: 231 GEDLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI----- 284

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW-PQTSTSKG 345
              + +   V+R  +L   YR PI+FT          ++RL  A+  +     +TS +  
Sbjct: 285 --KKEYDLMVVRFWLLSASYRLPINFTREIIEQAKNSLERLNNAKFRMDDLLEKTSGNLK 342

Query: 346 IIDPAVLSALYN-----------DLNTVSAIQALHKLARESTKNHD----------LLPI 384
             +  ++  L N           DLNT  A+  L ++++ +    D             +
Sbjct: 343 DEEKDLVKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKLDENSSKEFVEKTRDL 402

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F     +LGIE  K+  +      I KL++ER    K K F  AD IR +L   G +++D
Sbjct: 403 FIKLEDVLGIENRKKTDDSIDEDLINKLIEERKEAKKAKDFKKADEIRDKLSEMGILIKD 462

Query: 445 YKNPDNGQRMTRWKQK 460
            +        T+W+ K
Sbjct: 463 TREG------TKWELK 472


>gi|87301066|ref|ZP_01083907.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284034|gb|EAQ75987.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 493

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 183/511 (35%), Positives = 253/511 (49%), Gaps = 75/511 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL ++   FQ   P  + +Y CG TVYD  H+G+AR  IV+DVL R L  + G +
Sbjct: 3   LRLTNTLTKRTEPFQPRVPGEVSIYCCGVTVYDLCHLGHARSYIVWDVLRRYL-IWRGYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+NITDIDDKI+ RA +E  S+       +++ +N   F  D   L  L P   PR
Sbjct: 62  -VTFVQNITDIDDKILRRAAEEGSSM------EVVSERNITAFRDDMDSLNILPPDRVPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  +  +  +I  +   G AY A+ ++ F     P+YG  S R + +Q+ G        
Sbjct: 115 ATRCLDGIRAMIAELEASGAAYSADGDVYFAVMGQPDYGKLSGRSLSDQQDGASGRLNSD 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EESRKRHPFDFALWKGAKPGEPSFPSPWGPGRPGWHIECSAMVRQELGTTIDIHLGGSDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  E  A  W+HNG +N++G KMSKS GNF TI  LL +      
Sbjct: 235 IFPHHENEIAQSEAANG-EPLARYWLHNGMVNVDGEKMSKSLGNFTTIRALLASGV---- 289

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTE--------------------------AEILL 334
              A  +RL +L  HYR+P+DF+ + L                            A++  
Sbjct: 290 --SAMTLRLFVLQAHYRKPLDFSREALDAAATGWHGLNEALGLGLNTTFSAALGWADVAA 347

Query: 335 SKWPQTSTSKGIIDP--AVLSALYNDLNTVSAIQALHKLAR-----------------ES 375
           +  P      G+       + AL +DLNT +A+  L +LAR                 E 
Sbjct: 348 ATQPAPGHDAGLETSRQGFIDALDDDLNTSAALAVLFELARPLRALARRLERGAEASGED 407

Query: 376 TKNHDLLPIFNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
              H    +    + +LG+E         E         I  L+ ERL   + K++  AD
Sbjct: 408 RALHARWLLLQELSGVLGLEPEISSRSEAEAGAGPAPAQILALISERLAARQQKRYPEAD 467

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L S+G  L D   PD     T W ++
Sbjct: 468 AIRDRLRSEGIELID--RPDG---TTEWIRR 493


>gi|271962520|ref|YP_003336716.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270505695|gb|ACZ83973.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 465

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 171/472 (36%), Positives = 247/472 (52%), Gaps = 50/472 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYG 62
            + +Y+T  R + EF  ++P    +Y+CG TV    HIG+ R  + FDVL R ++R  Y 
Sbjct: 2   SLHLYDTSVRTVREFVPVEPGRASIYLCGATVQAPPHIGHIRSGVNFDVLRRWMVRSGYE 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+ RN+TDIDDKII  A  E   +P      +I  +N + F      L CL PT +
Sbjct: 62  ---VTFCRNVTDIDDKIIRVAADE--GVPW----FVIAERNQRAFTWAYEVLGCLPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           PRAT H+P+MI L++ +I  GHAY ++ ++ FD  S  + YGS S ++++  +       
Sbjct: 113 PRATGHVPEMIELMERLIAAGHAYASSGDVYFDVMSYADRYGSLSNQRLENMRAAGDTDT 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK   P EP W +PWGRGRPGWH+ECSAM++ YLG  FDIHGGG+DLI
Sbjct: 173 DSCKRDPRDFALWKGEKPGEPTWPTPWGRGRPGWHLECSAMATKYLGPTFDIHGGGVDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+ QS  A   +  A  W+HNG L +   KMSKS GN + I E+  TKK     
Sbjct: 233 FPHHENELTQSQAAG--DGFARYWMHNGMLKIGAEKMSKSLGNSLLIPEV--TKKV---- 284

Query: 302 WPAPV-IRLAMLMTHYREPIDFTV----------QRLTEAEILLSKWPQTSTSKGIIDPA 350
              PV +R  +   HYR  ID++           QR+       ++      +   +  A
Sbjct: 285 --RPVELRYYLAAPHYRSSIDYSEEALAEAASAYQRIEGFVTRAAEVIHDVDAHAPLPQA 342

Query: 351 VLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAH----ILGIEVCKEH- 400
              AL +DL T  A+  +H++ RE     +  N + +    A       +LG++   E  
Sbjct: 343 FADALDDDLGTPQALAVVHEVVREGNVALAQGNKEQVARLLAETQNMLDVLGLDPRSEQW 402

Query: 401 --------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   L   +   +   +++R      K F++AD IR QL   G ++ED
Sbjct: 403 RSSGGDTGLRSTVDALVSVALEQRQAARGRKDFAAADGIRDQLAGAGILVED 454


>gi|225468584|ref|XP_002263880.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
          Length = 484

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/503 (34%), Positives = 251/503 (49%), Gaps = 110/503 (21%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNT+ ++   F+ +    + MYVCG T YD +H+G+AR  + FDVLYR L++   E
Sbjct: 6   ELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGYE 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRN TD+DDKII RA +      + +    ++S+  Q+++ D T L CL PT QP
Sbjct: 66  --VTYVRNFTDVDDKIIRRANE------LGENPLTLSSRFCQEYLDDMTDLQCLTPTQQP 117

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK+++ + G RV    
Sbjct: 118 RVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDS 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   FDIHGGG+DLIFP
Sbjct: 178 RKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSC A                        +SN     I +L          + 
Sbjct: 238 HHENEIAQSCAA----------------------CQESN-----ITDL----------YH 260

Query: 304 APVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSKGIIDP 349
              +R  +L THYR P+++++              Q L + E  LS + + +     I P
Sbjct: 261 PLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCITP 320

Query: 350 AV---LSALYNDLNT---------------------------------------VSAIQA 367
           A    +S L  D  T                                       +SA+Q+
Sbjct: 321 AAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQS 380

Query: 368 LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLK 421
           L +L +E      +L + +  A+    EV ++   K +  A      +  L++ER +  K
Sbjct: 381 LTELEKEVKGVLSVLGLLSTLAY---SEVLQQLKGKALRRAGMIEDDVLHLIEERALARK 437

Query: 422 MKKFSSADYIRKQLESKGFILED 444
            K FS  D IR  L SKG  L D
Sbjct: 438 NKNFSRGDQIRADLASKGIALMD 460


>gi|296106895|ref|YP_003618595.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648796|gb|ADG24643.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 413

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 176/432 (40%), Positives = 235/432 (54%), Gaps = 41/432 (9%)

Query: 47  MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
           M+ FDV+ R LR    +  VTYVRNITDIDDKII RA +   SI        +T++    
Sbjct: 1   MVAFDVMVRYLRSQGFD--VTYVRNITDIDDKIIARASERDVSI------DELTAQYIDA 52

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSF 165
              DT  L  L P H+PRAT HI  +I LIQ ++  G AY   N ++ ++  + P YG  
Sbjct: 53  MNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKL 112

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
           S + I+    G+RV     K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H
Sbjct: 113 SHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMH 172

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            LG+ FDIHGGGLDL FPHHENEIAQS  A   +  AN W+H G L + G KM+KS GNF
Sbjct: 173 ELGEQFDIHGGGLDLQFPHHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNF 231

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
            TI ++L+            VIR  +L +HYR P++++ + L  A+  L +         
Sbjct: 232 YTIADVLKEHH-------PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVP 284

Query: 338 PQTSTSK--GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG 393
           PQT+ SK           A+ +D NT  A+  L +LA E  K++   L       A ILG
Sbjct: 285 PQTADSKLDEYWQEQFNQAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILG 344

Query: 394 I------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                     +  L +   + IE+L+ ERL     + ++ AD IR  L SKG  LED   
Sbjct: 345 FLQKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELED--- 401

Query: 448 PDNGQRMTRWKQ 459
              G   T W++
Sbjct: 402 ---GATGTTWRR 410


>gi|15675744|ref|NP_269918.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911468|ref|YP_283018.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|21264023|sp|Q99XZ9|SYC_STRP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13622964|gb|AAK34639.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71854250|gb|AAZ52273.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 447

 Score =  285 bits (728), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 167/462 (36%), Positives = 249/462 (53%), Gaps = 42/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + +YVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNIYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q   S P       ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAATQAGVS-PKE-----LSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           FPHH NEIAQS    +  KT AN W+HNGF+ ++  KMSKS GNF+T++++L+T      
Sbjct: 234 FPHHTNEIAQSEA--KTGKTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTVD---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTS------KGIID 348
                V+R  +    YR+PI+FT + + +AEI L       + P T T+      + +I 
Sbjct: 288 ---GQVLRFFLATQQYRKPINFTEKTIHDAEINLKYLKNTLQQPLTETADEQELKQFVI- 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGIEVCKEHLNKNI 405
            A   A+ +D NT + I  +  +A+         P+   F     + GI   +E L    
Sbjct: 344 -AFQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL---- 398

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + IE L+ +R      + F++AD IR QL  +G  L D K+
Sbjct: 399 EVDIEALIAKRQEARANRDFATADAIRDQLAVQGIKLLDTKD 440


>gi|293378885|ref|ZP_06625040.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|292642426|gb|EFF60581.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 446

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 171/470 (36%), Positives = 253/470 (53%), Gaps = 62/470 (13%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNAR  I FD + R   Y  G K V +V N TD+DDKII  A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYR-GYK-VDFVSNFTDVDDKIIRTANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            + P       +  +  + F +DT  L     T  PR  +H+P ++  IQ ++  G+AYE
Sbjct: 59  IAAPE------VADRFIRAFEEDTKALNVEPATLHPRVMDHMPDILAFIQVLVEKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PEKYHKKNPADFILWKRSTPMEPGW 204
           ++ ++ + T    NYG  S + IDE ++G       E+  K++P DF LWK++ P E  W
Sbjct: 113 SSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEEQQQKEDPLDFALWKQAKPGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           +SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL FPHHENEIAQS  A   +K AN 
Sbjct: 173 DSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLEFPHHENEIAQS-EAKTGKKFANY 231

Query: 265 WIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           W+HNG++ +  +  KMSKS GNFIT++E+++            V+R  M  T YR PI +
Sbjct: 232 WMHNGYVTIGEDDEKMSKSLGNFITVHEMIQNVD-------PQVLRFFMATTQYRRPIRY 284

Query: 323 TVQRLTEAEILLS---------KWPQTSTSKGIIDPA------------VLSALYNDLNT 361
           +   + EA   L          K+ Q + S+ + D A             +  + +D N 
Sbjct: 285 SETTMKEAATNLQRLKNTFDNLKFRQETASENLADDADKITLLENLEQRFIEEMDDDFNA 344

Query: 362 VSAIQALHKLAR-------ESTKNHDLL----PIFNASAHILGIEVCKEHLNKNISIAIE 410
            + I  +++LA+       ++  +  +L     +F+    I GI    E L   +   IE
Sbjct: 345 ANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFSQWLSIFGILFTAEEL---LDEEIE 401

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +L++ER      + F+ +D IR  L+ KG +LED   P      TRW+++
Sbjct: 402 QLIEERNQARSNRDFARSDEIRDLLKEKGILLED--TPQG----TRWRRE 445


>gi|307594505|ref|YP_003900822.1| cysteinyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307549706|gb|ADN49771.1| cysteinyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 491

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 181/492 (36%), Positives = 256/492 (52%), Gaps = 50/492 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNT  + + +   + P   R+YVCG T YD  H+G+AR  + +D+  R L Y   E 
Sbjct: 10  IIVYNTASKNLEKITLLRPGLARIYVCGLTPYDSMHVGHARTFVFYDIFRRYLEYLGVE- 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TDIDDKII RARQE     IN    +  S+  ++F     RL        P+
Sbjct: 69  -VRFVTNFTDIDDKIINRARQEFGGELINRWYEV-PSRYIKEFFDAMDRLYVKRAYAYPK 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T +I  M+  IQ ++    AY + +  + FD + +P YG FS +KI++   G RV  + 
Sbjct: 127 VTENINDMLKWIQELVSKNLAYVSPDGSVYFDITKVPRYGEFSGQKIEDLIAGARVEPEP 186

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  +  EP W SPW  GRPGWH+EC  MSS YLG  FDIHGGG DLIFP
Sbjct: 187 GKRNPLDFALWKSWSEGEPWWNSPWSPGRPGWHLECVVMSSKYLGVPFDIHGGGQDLIFP 246

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     I+  A  WIH G + + G+KMSKS GN I I E+L       R + 
Sbjct: 247 HHENEIAIARVYFGIDYFARYWIHVGLVTIRGQKMSKSLGNIIPIMEVL-------RKYD 299

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             V+RL   MT YR+P+DF          ++  +  A  +L++    +   G  D  +LS
Sbjct: 300 GEVLRLYYAMTQYRKPMDFDPDALDQVRNSLMSVYAAYDMLTEAINEAPDTGDRDNELLS 359

Query: 354 -----------ALYNDLNTVSAIQALHKLAR-------ESTKNH------DLLPIFNASA 389
                      +L ND+NT  A+ AL   AR        +T+++      + L  F+  A
Sbjct: 360 KVNEFVNSFEESLNNDINTSGAVAALMDFARYIASTVIYNTQHYSRNALTNALTAFSDLA 419

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           +ILGI + +  L  ++   I+ L++ R  L   K F  AD IR +L   G ++ D  N  
Sbjct: 420 NILGI-LNRTRLPPSLVSLIDTLIRIRAQLRARKMFDVADEIRNELSKLGVVVSDVGNKT 478

Query: 450 ----NGQRMTRW 457
               +  ++T+W
Sbjct: 479 YWYIDRDKITQW 490


>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229558710|sp|B4U9I4|SYC_HYDS0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 488

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 177/495 (35%), Positives = 253/495 (51%), Gaps = 74/495 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           +YNTL  ++ EF  I+P  + +Y CG TVYD +H+G+ R +IVFDV  R     Y EK  
Sbjct: 5   LYNTLSAELEEFVPINPPQVNIYTCGVTVYDDSHVGHGRSLIVFDVFRR-----YLEKLG 59

Query: 66  --VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN TDIDDKII +A +E      N     I ++   ++  D   +       +P
Sbjct: 60  YRVKFVRNFTDIDDKIINKANEE------NKDFMSIANRYIARYYLDMEAINVKPANVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T H+ ++I LI  +I  G AYE++ +I F   S  +YG  S+R  +E + G R+    
Sbjct: 114 RVTEHMEEIISLISKLIELGKAYESDGDIYFSIDSFKDYGKLSKRSPEELEAGARIEPSL 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK S   EPGWESPW  GRPGWH EC AM   +LG+  DIH GG+DL+FP
Sbjct: 174 KKRNPLDFALWKASKSHEPGWESPWSYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A  W+HNG + + G+KMSKS GNF+T+ E+          + 
Sbjct: 234 HHENEIAQAESITG-KPFARYWMHNGLVTVGGKKMSKSLGNFVTLKEIY-------TKYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIIDPAVL 352
             V+RL +L THYR P+DF+ +++ E +    +                  K ++D    
Sbjct: 286 PDVLRLLVLFTHYRSPLDFSFEKMEETKKAYERLKSAIEDIEPLKAIAKEGKPVVDIDFY 345

Query: 353 S-----------ALYNDLNT-------VSAIQALHKLARESTKNHDLLP------IFNAS 388
           S           AL  D NT        +A+  L+K   ES K   + P      +F A+
Sbjct: 346 SLEKSTQEQFYKALSEDFNTSLAIAHIFNAVAELNKAKTESFKIGYITPKELEGYLFLAN 405

Query: 389 A------HILG----------IEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYI 431
           +       I G          ++  +   + NIS   +E L++ R +  + K F  AD+I
Sbjct: 406 SLKQTLKDIFGLLEENTLQNTLKTLEPASSVNISTEFLEILIKARNLAKENKDFKVADFI 465

Query: 432 RKQLESKGFILEDYK 446
           R +L + G  LED K
Sbjct: 466 RDELLNYGIKLEDTK 480


>gi|227485588|ref|ZP_03915904.1| cysteinyl-tRNA synthetase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236454|gb|EEI86469.1| cysteinyl-tRNA synthetase [Anaerococcus lactolyticus ATCC 51172]
          Length = 472

 Score =  284 bits (727), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 183/479 (38%), Positives = 262/479 (54%), Gaps = 56/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R    F+ I+ + I+MYVCGPTVYD+ HIGNARP+++FD   R + Y   + 
Sbjct: 1   MKIYNTLSRTKEVFKPIEENKIKMYVCGPTVYDYMHIGNARPLVIFDTFRRFMTYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            VTYV N TD+DDKII+++  E  +         +T +   Q++ D   L      T  P
Sbjct: 60  -VTYVVNFTDVDDKIIKKSIVEGITTKE------VTDRYIAQYMIDAKALNLDEEDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPE 181
           RAT  +  +I  ++ +I  G AY ++ ++ FD S   +YG  SR+ +D+   G   R+ +
Sbjct: 113 RATEVMDDIINFVKGLIDKGMAYVSDGDVYFDVSKKTDYGKLSRKNLDDLVHGASQRLDD 172

Query: 182 K--YHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
                KKNPADF LWK +    E  W+SPWG+GRPGWHIECS M+   LG   DIH GG 
Sbjct: 173 NDAGKKKNPADFTLWKATKLSGEVAWDSPWGKGRPGWHIECSTMNKKILGDTIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS   + + K AN W+HNG + + G KMSKS GNF T++++       
Sbjct: 233 DLEFPHHENEIAQSEALNDV-KFANYWMHNGMIQVNGSKMSKSVGNFFTLDDI------- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLT----EAEILLSKWPQ---TS 341
            + +    IR  +L T YR+PI+FT          + RL     +AE LL+K  +   +S
Sbjct: 285 KKEYDLMTIRFWLLTTSYRQPINFTKEIIDQAQASLDRLNNAYFKAEELLAKTSEKEISS 344

Query: 342 TSKGIIDPAV------LSALYNDLNTVSAIQALHKLAR------ESTKNHDLL----PIF 385
             K ++   V      +S + +DLNT  AI  L  LA+      E   + D +      +
Sbjct: 345 VEKDLLQILVDKENEFVSVMEDDLNTADAITVLFDLAKFINTNLEGDSSKDFVEKTFETY 404

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +    +LG+ + K+  ++     IE+ + ER    K K F+ AD IR  L+  G IL+D
Sbjct: 405 SRLYDVLGL-LAKKKESEVDEAFIEEKIAERNSAKKAKDFAKADKIRDDLKEMGIILKD 462


>gi|307704342|ref|ZP_07641259.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622102|gb|EFO01122.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 423

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 169/446 (37%), Positives = 239/446 (53%), Gaps = 41/446 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ H+GNAR  + FD + R   Y   E  V Y+ N TD+DDKII RA++E 
Sbjct: 1   MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE--VAYISNFTDVDDKIINRAKEEG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            + P       + +K    F +D T L     T  PR    +  +I  ++ +I  G AYE
Sbjct: 59  IT-PQE-----VANKYIAAFREDVTALGVKPATRHPRVVEFMADIIRFVEELIEKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PEKYHKKNPADFILWKRSTPMEPGW 204
           +  ++ F      NY   + + +++ ++G       E   K+NP DF LWK + P E  W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEETARKENPVDFALWKAAKPGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-AN 263
           +SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH NEIAQS    +  KT AN
Sbjct: 173 DSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEA--KTGKTFAN 230

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGF+N++  KMSKS GNFIT+++ L+T           V+R      HYR+PI+FT
Sbjct: 231 YWMHNGFVNIDNVKMSKSLGNFITVHDALKTID-------GQVLRFFFATQHYRKPINFT 283

Query: 324 VQRLTEAEILLSKWPQTSTS--KGIIDPAVL--------SALYNDLNTVSAIQALHKLAR 373
            + + +AE  L     T      G +D   L        +A+  D N  + I  + ++A+
Sbjct: 284 EKAVRDAETNLKYLKNTYEQPFTGNVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAK 343

Query: 374 E-STKNHD--LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
             ++ N+D  +     A   + GI   +E L+      IE L+Q+R      + F++AD 
Sbjct: 344 WINSGNYDASVKEALAAMLEVFGIVFIEEVLDAE----IETLIQKRQEARANRDFATADQ 399

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTR 456
           IR QL ++G  L D K   +G R TR
Sbjct: 400 IRDQLAAQGIKLLDTK---DGVRWTR 422


>gi|295838034|ref|ZP_06824967.1| cysteine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197699162|gb|EDY46095.1| cysteine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 467

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 166/478 (34%), Positives = 249/478 (52%), Gaps = 63/478 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   E 
Sbjct: 3   IRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGVPHIGHIRSGLDFDIMQRWFAYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT+VRN+TDIDDKII++ A Q+ P   I         +N + F      L CL PT++P
Sbjct: 62  -VTFVRNVTDIDDKIIKKSAEQDRPWWAIG-------YENERAFNAAYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +MI +++ +I  GHAYE+   + FD  S P+Y   S +++D     +   E  
Sbjct: 114 RATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPDYLELSHQELDNLLQPSGEGES- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIFP
Sbjct: 173 GKRDARDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGTAFDVHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      ++ A  W+HN ++ + G KM+KS GN + ++E+++        W 
Sbjct: 233 HHENEIAQSRAYG--DEFAKYWVHNAWVTMSGEKMAKSLGNSVLVSEMVQ-------RWR 283

Query: 304 APVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTSKGI 346
             V+R  +   HYR  I+++                 VQR+TE    L+       ++  
Sbjct: 284 PIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTE----LNGGEVAPAAE-- 337

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVC 397
           + PA   A+ +DL    A+  +H   R+                L    A   +LG++  
Sbjct: 338 VPPAFAEAMDDDLGVPQAVAVVHTTVRQGNSALGADDKEAAVARLAEVRAMLGVLGLDPQ 397

Query: 398 K-----------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                       E L+  +   +  ++++R      K + +AD IR QL   G  +ED
Sbjct: 398 SPQWAAVGGEQAEDLHGVVDTLVRLVLRQREDARARKDWPAADAIRDQLAQSGLAIED 455


>gi|300362340|ref|ZP_07058516.1| cysteine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353331|gb|EFJ69203.1| cysteine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 472

 Score =  284 bits (726), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 168/478 (35%), Positives = 258/478 (53%), Gaps = 56/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        + ++  + F++DT  L     T  PR
Sbjct: 62  -VKYVSNFTDVDDKMINEARKEHTTV------GELANRYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG+  DIHGGG D
Sbjct: 175 EQNKKEDPIDFALWKAQKEDDEIAWDSPWGKGRPGWHIECSVMSTKYLGETIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR PI+++   L +AE +L ++  T                 
Sbjct: 289 --KEIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLADEQEPLED 346

Query: 341 STSKGIIDPA---VLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASA---- 389
           +T +  +  A    + A+ +D N  +A+  ++ LA        K+    P    +     
Sbjct: 347 NTLRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLASNLNTHLQKDQVDKPALKKAKKLLL 406

Query: 390 ---HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               I G+   ++  + +    IE +V +R    K K ++ +D +R +L++KG ++ED
Sbjct: 407 DWLEIFGVSFNEKQADDDDE--IEAMVAKRDEARKNKNWAESDRLRDELQAKGIVIED 462


>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 468

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/467 (38%), Positives = 239/467 (51%), Gaps = 56/467 (11%)

Query: 17  EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
           EF+ +    IRMYVCGPTVYD+ H+G+AR  I FDV+ R L +      V  V N TDID
Sbjct: 7   EFKPLRDDEIRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEH--KGYTVLMVMNFTDID 64

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           DKII RA +        +    +  K  + F++D   L        PR T HI  +I  +
Sbjct: 65  DKIIRRANE------TGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQDIIEFV 118

Query: 137 QNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
           + +   G+AY +++ + F+      YG  S+  +++ + G RV     KKNP DF LWK+
Sbjct: 119 RKLEEKGYAYGSSDGVYFEVRKYEKYGKLSKVNLEDLRKGVRVEPGEGKKNPEDFALWKK 178

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS-CCA 255
           + P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPHHENEIAQ+  C 
Sbjct: 179 AKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIAQTEACT 238

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
            +  +    W H GF+ + G KMSKS GNF+TI ELL+        +   VIR  +L  H
Sbjct: 239 GK--EWVKYWFHTGFVMVSGEKMSKSLGNFVTIRELLQ-------RYSPEVIRFFVLQKH 289

Query: 316 YREPIDFTVQRLTEAEILLS--------------------KWPQTSTS--KGIIDP--AV 351
           YR P+D+T + +  A+  L                     KW +      + I D    +
Sbjct: 290 YRSPLDYTEEGIQHAKNNLERLYNTIENIRIAMEKVEVPFKWEKEEFELYETIRDAKKKL 349

Query: 352 LSALYNDLNTVSAIQALHKLAR---------ESTKNHDL---LPIFNASAHILGI--EVC 397
             A+ +D NT  A++ + ++A          E  K   L   L  F   + + GI  E  
Sbjct: 350 YEAMDDDFNTAEAMKPIFEVANAVNAYLTKVEKPKESVLRKALEFFRIISEVFGIFEEYF 409

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           KE         IE L++ R  L K K F  AD IR QL   G  LED
Sbjct: 410 KEAKETKEEELIELLIEVRSALRKQKNFELADKIRAQLRELGIQLED 456


>gi|315428011|dbj|BAJ49600.1| cysteinyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 475

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 260/493 (52%), Gaps = 66/493 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+NT  R +  F+   P ++ MYVCGPTVYD AH+G+AR  + FD + R L +  G +
Sbjct: 2   IKIFNTYSRSLEVFEPHIPGHVTMYVCGPTVYDVAHLGHARTYVAFDAVIRFLEFM-GYR 60

Query: 65  CVTYVRNITDI-------DDKII---ERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y RN+TD+       +D++I   ER R+ HP          +  K   +F +D   L
Sbjct: 61  -VKYARNVTDVGHLRETGEDRMIVGAERLRK-HPME--------VADKYMMEFFRDMDAL 110

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P  QPRA+ HIP++I  ++ ++  G+ Y  +  + FD S  P+YG  S  K +E  
Sbjct: 111 GIRRPDIQPRASMHIPEIIEAVEKLVDKGYGYVIDGSVYFDISKFPDYGKLSNIKPEELL 170

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           M  R+     KK+PADF LWK S P  P  W++PWGRG PGWHIECS MS  YLG+  DI
Sbjct: 171 M-HRIDPDPRKKHPADFALWKESPPSYPFSWKTPWGRGFPGWHIECSIMSMKYLGEQIDI 229

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG +LIFPHHENEIAQS      +     W+H G L + GR M KS GNFITI + L+
Sbjct: 230 HGGGQELIFPHHENEIAQSEALTGKKPFVKYWMHTGELTVGGRGMHKSYGNFITIQDALK 289

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------ 347
           T       +P+ V+RL +L  HYR P+D++ + + +A     K      +  +I      
Sbjct: 290 T-------YPSDVLRLFILSAHYRTPLDYSEKSMEQAAENFDKITNFYENLSLIAEEDRA 342

Query: 348 ---DPAV-----------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-- 391
              DP++           + A+  D NT +A+  ++   ++     D +     +AH+  
Sbjct: 343 KPRDPSLDELGDVFKQSFIEAMSEDFNTPNALAIVYDFMKKVNTRLDDIG-HEQAAHLRQ 401

Query: 392 LGIEVCK-----EHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           L +E C+     + + +  S A     ++ LV+ R  L K   +  AD IR  L  +G +
Sbjct: 402 LFLETCRALGLLQKIERRSSAAEVMEFVKTLVEVRRELRKRGMYDLADRIRNMLAERGIV 461

Query: 442 LEDYKNPDNGQRM 454
           +ED K    G+R+
Sbjct: 462 VEDTK---EGERI 471


>gi|319760441|ref|YP_004124379.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039155|gb|ADV33705.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 468

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 191/490 (38%), Positives = 254/490 (51%), Gaps = 59/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL +K    + I+ + I++YVCG TVYD  H+G+AR   +FD + R L Y   + 
Sbjct: 2   LKIFNTLTQKKEILKPINFNTIKLYVCGVTVYDLCHLGHARTFSIFDTIIRYLNYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKII+RA   H      + I   T++  Q+   D   L  L P H+P+
Sbjct: 61  -VEYTRNITDIDDKIIQRAFSHH------ETIVQFTNRMIQEMYIDLDNLNILRPKHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            TN+I  +I  I  ++   HAY   N +++F  ++   YG  SR K   Q +        
Sbjct: 114 VTNYIDTIINCIHLLLKKKHAYITRNGDVMFSINTANKYGILSRNKKLIQSISKYTNHNT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKN ADF+LWK +   EP W SPW +GRPGWHIECSA+S + LGK  DIHGGG DL+FP
Sbjct: 174 IKKNSADFVLWKSAKFNEPYWMSPWSKGRPGWHIECSAISHNILGKNIDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKT--ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HHENEIAQS CA  I+     NIW+H G L L   KMSKS  NF TI E+L       + 
Sbjct: 234 HHENEIAQSACAYSIDPNVYVNIWMHVGMLLLNNEKMSKSLNNFFTIREIL-------KK 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------- 354
           +    IR  +L  HYR  + +    +  A++ L +          I+P V SA       
Sbjct: 287 YDPETIRYFLLSAHYRNQLKYNDNNMKSAQLALKRLYIALYG---INPIVHSANDEERYF 343

Query: 355 -------LYNDLNTVSAIQAL----HKLARESTKNH-----DLLPIFNASAHILGIEV-- 396
                  + +D NT  A   L    H+L R  +K++      L       A+ILGI    
Sbjct: 344 TLKFIEKMNDDFNTPEAYSVLFEMAHELNRLKSKHYYIRAQRLATQLKLLANILGILYQN 403

Query: 397 ------CKEHLNKN-ISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                 C+   NKN   I  I+KL+Q R    K K +  AD IR QL + G ILED   P
Sbjct: 404 PENYLQCQVSKNKNPFEIEKIQKLIQIREDARKNKNWELADKIRTQLTTLGVILED--EP 461

Query: 449 DNGQRMTRWK 458
           +     TRW+
Sbjct: 462 EGK---TRWR 468


>gi|307706127|ref|ZP_07642946.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618527|gb|EFN97675.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 423

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 170/447 (38%), Positives = 242/447 (54%), Gaps = 43/447 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ H+GNAR  + FD + R   Y   E  V Y+ N TD+DDKII RA++E 
Sbjct: 1   MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE--VAYISNFTDVDDKIINRAKEEG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            + P       +  K    F +D T L     T  PR    +  +I  ++++I  G AYE
Sbjct: 59  IT-PQE-----VADKYIAAFREDVTALGVKPATRHPRVVEFMADIIRFVEDLIGKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PEKYHKKNPADFILWKRSTPMEPGW 204
           +  ++ F      NY   + + +++ ++G       E   K+NP DF LWK +   E  W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEETARKENPVDFALWKAAKSGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-AN 263
           +SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH NEIAQS    +  KT AN
Sbjct: 173 DSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEA--KTGKTFAN 230

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGF+N++  KMSKS GNFIT+++ L+T           V+R      HYR+PI+FT
Sbjct: 231 YWMHNGFVNIDNVKMSKSLGNFITVHDALKT-------LDGQVLRFFFATQHYRKPINFT 283

Query: 324 VQRLTEAEILLSKWPQTSTS--KGIIDPAVL--------SALYNDLNTVSAIQALHKLAR 373
            + + +AE  L     T      G +D   L        +A+  D N  + I  + ++A+
Sbjct: 284 EKAVRDAETNLKYLKNTYEQPFTGTVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAK 343

Query: 374 E-STKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
             ++ N+D   +  A A +L   GI   +E L+    + IE L+Q+R      + F++AD
Sbjct: 344 WINSGNYD-ASVKEALADMLEVFGIVFVEEVLD----VEIEDLIQKRQEARANRDFTTAD 398

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTR 456
           +IR QL ++G  L D K   +G R TR
Sbjct: 399 HIRDQLAAQGIKLLDTK---DGVRWTR 422


>gi|330718101|ref|ZP_08312701.1| cysteinyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 469

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 179/485 (36%), Positives = 256/485 (52%), Gaps = 57/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL  +   F++I P+ I MYVCGPT+Y++ HIGNAR  I FD + R   +   E 
Sbjct: 2   IHVYNTLTHQKEIFKSIQPNLITMYVCGPTIYNYIHIGNARSAIAFDTIRRYFEFRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA +E  S       + IT K  Q F  DT  L     T + +
Sbjct: 61  -VNYVSNFTDVDDKIINRAHEEGVSE------ATITEKYAQAFENDTLPLNIKPATVRSK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
           AT  IP +I  +  +I  G+AYEA+ ++ F       YG  + + ++E + G      PE
Sbjct: 114 ATEVIPDIISFVSELIAKGYAYEADGDVYFRARQFKGYGILAHQDLNELEAGASGRLDPE 173

Query: 182 KYHKKNPA-DFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           +  KK  A DF +WK  + P    W+SPWG GRPGWHIECS M+  YLG   D+HGGG+D
Sbjct: 174 ELAKKEDALDFAVWKSENRPGVISWDSPWGNGRPGWHIECSVMAQKYLGNTIDVHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           L FPHH NEIAQS    R  +T  + W+HNGF+N+   KMSKS GNFIT++++LE     
Sbjct: 234 LAFPHHTNEIAQSEA--RTGQTFVHYWLHNGFVNINDEKMSKSLGNFITLHDMLE----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDPA 350
            R      IR  +  T YR PI+++   LT+A + L +          +   SK   + A
Sbjct: 287 -RYDDPMTIRYLLSTTQYRRPINYSEDTLTQARVELDRIRTAYRNLHFRMKDSKDGRNEA 345

Query: 351 V-----------LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
           V           ++A+ +D NT +A+ A+ +L   +    +           LL    A 
Sbjct: 346 VESDINEYKKQFIAAMDDDFNTQNALAAIFELIALANTYSEAAIIQRDTAMLLLETMTAL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             + GIE       + +++  + L+++R+I  + K FS +D IR  L+ +  I+ED    
Sbjct: 406 MQVFGIETLMP--VEQLTVEQQSLLEQRVIARQNKDFSESDRIRDILKLQDIIVEDTA-- 461

Query: 449 DNGQR 453
             GQR
Sbjct: 462 -QGQR 465


>gi|226356626|ref|YP_002786366.1| cysteinyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226318616|gb|ACO46612.1| putative cysteine--tRNA ligase (Cysteinyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 491

 Score =  283 bits (725), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 189/505 (37%), Positives = 253/505 (50%), Gaps = 77/505 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           I +Y+TL+R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R  L   Y  
Sbjct: 14  IFLYDTLQRQKVRFTPTTPGRVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRAFLHLGY-- 71

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V YV NITD+          +DKI +RA  E    P+      +  K    FV+D   
Sbjct: 72  -QVRYVGNITDVGHLQNDADEGEDKIAKRAALEQLE-PME-----VADKYFWSFVRDMEA 124

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L  L P+  PRAT HI + I LI+ +I  GHAYE+   + FD  S P YG  S RK+DEQ
Sbjct: 125 LNILKPSINPRATGHITEQIRLIEELIERGHAYESQGSVYFDVRSWPEYGKLSGRKLDEQ 184

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGK 229
           + GTR   +  K++P DF LWKR+   E G    WESPWG G PGWHIECSAMS  YLG+
Sbjct: 185 EEGTREVVREEKRDPRDFALWKRA---EAGHIMRWESPWGVGFPGWHIECSAMSLKYLGE 241

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGGLDL FPHHE EIAQS  A      A  W+HN  L + G KMSKS GNF TI 
Sbjct: 242 GFDIHGGGLDLQFPHHEAEIAQSEAAG--HAFARYWMHNNMLTIGGEKMSKSKGNFTTIA 299

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQ 339
           ELLE            V+R  ++ +HYR   +F+           +RLTE    + +  Q
Sbjct: 300 ELLEKHD-------PMVVRFLLVGSHYRSVTEFSEEAFESARNGYRRLTETLHEVGRRLQ 352

Query: 340 TSTSKGI--IDPAVLS-------ALYNDLNTVSAIQALHKLARESTK-------NHDLLP 383
            + +     +D  V +       AL +D NT  A+ AL  L  +            D L 
Sbjct: 353 GAPAGATEALDARVQAHTHAFEDALRDDFNTPKAVAALFGLTGDVNAALASGPVGQDTLN 412

Query: 384 IFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
               +   LG  V          ++   + +   +E +++ R      K+++ AD +R  
Sbjct: 413 RVQEAYMALGGGVLGLFHASASERQDDTQVVDTLMELVLKARQHYRLSKQYAQADELRDT 472

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L   G  +ED K+        RWK+
Sbjct: 473 LARVGVTVEDTKDG------VRWKR 491


>gi|254411359|ref|ZP_05025136.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196181860|gb|EDX76847.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 482

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 173/497 (34%), Positives = 249/497 (50%), Gaps = 64/497 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F  I+   +RMY CG T YD+ H+G+AR  I++D   R L++   + 
Sbjct: 3   LTLYNTLTRRKEPFSPIEAGKVRMYCCGITAYDYCHLGHARTCIIWDTARRYLQWRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RARQE  S+        ++ +  Q + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRARQEGTSM------EAVSERFIQAYFEDMARLNVDEADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  LI ++    +AY A  ++ +       YG  S RK+++ + G   RV   
Sbjct: 115 ATHCLDGIKRLIYDLEQKNYAYPAAGDVYYAVRRFGEYGKLSGRKLEDLQAGASGRVEVA 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   KK+  DF LWK S P EP WESPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 175 DAEAGKKKDAFDFALWKGSKPGEPAWESPWGAGRPGWHIECSAMIRDNLGDTVDIHAGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS      +  A  W+H G + + G KMSKS GNFITI +LL+     
Sbjct: 235 DLVFPHHENEIAQSEAVTG-QPLARYWLHTGMVIVNGEKMSKSLGNFITIRDLLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSK-------WPQTST 342
            R+     +RL +L   YR+P+DFT + L  A          +L          W  +  
Sbjct: 289 -RATDPMAVRLFVLQAQYRKPLDFTDEALAAATNGWHTLKDGLLFGDQYGEQLGWQDSDK 347

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIF 385
            +  +     +A+ +D N    +  L +LA++  +  ++L                    
Sbjct: 348 RQTAVLERFQAAVDDDFNFAEGLAVLFELAKDLGREGNILVHEGKTRTSPQELEAQWQTL 407

Query: 386 NASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
              A + G+EV  E +++  +       IE L+Q+R    K K F  +D IR +L+++G 
Sbjct: 408 VELAQVFGLEVQGEEISQESTSGLSDAEIEALIQQRSSARKRKDFEMSDRIRDELKAQGI 467

Query: 441 ILEDYKNPDNGQRMTRW 457
            L D         +TRW
Sbjct: 468 TLIDQSGG-----VTRW 479


>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 495

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 152/402 (37%), Positives = 213/402 (52%), Gaps = 43/402 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++Y+++ R+  +F+ + P    +Y+CGPT Y  AH+G+A   I FDV+ R L +   E
Sbjct: 3   QIRLYDSIRREKVDFEPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALSWLGFE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRNITD++DKI  RA  E+   P+      +  +   ++  D  R   LAP  +P
Sbjct: 63  --VTFVRNITDVEDKIFARA-AENGEEPL-----ALAERFAAEYNADMARFGVLAPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R + HI  ++ LIQ II +G AY  + ++ F   +   YG  S + +D+ + G RV    
Sbjct: 115 RVSTHIEDIVGLIQGIIDNGAAYPVDGDVYFSVEAFKPYGQLSGQSLDDLRAGARVEVDA 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK PADF LWK + P E  W++PWGRGRPGWHIECSAMS  +LG+ FDIHGGG DL+FP
Sbjct: 175 RKKAPADFALWKSAKPGELAWDAPWGRGRPGWHIECSAMSLRHLGQTFDIHGGGKDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+HNGFLN  G KMSKS GN     ++ +          
Sbjct: 235 HHENEIAQSQAAHGEDTFARYWMHNGFLNFSGEKMSKSLGNVFGCRQIADAVG------- 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEIL-------------------LSKWPQTSTSK 344
              +R   +  HYR P++F V  +    +                    L  +  T    
Sbjct: 288 PEALRFFSVSHHYRSPVNFEVDEVDGVTVFRDLEVADRRLDYFYSTLRRLDDFLATGKDP 347

Query: 345 G---------IIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
           G          + PA   AL +D NT   I AL + A+ + K
Sbjct: 348 GEGEVVPEADKLVPAAREALADDFNTPIVIAALGEAAKLANK 389


>gi|315426666|dbj|BAJ48292.1| cysteinyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 475

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 175/492 (35%), Positives = 257/492 (52%), Gaps = 64/492 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+NT  R +  F+   P ++ MYVCGPTVYD AH+G+AR  + FD + R L +  G +
Sbjct: 2   IKIFNTYSRSLEVFEPHLPGHVTMYVCGPTVYDVAHLGHARTYVAFDAVIRFLEFM-GYR 60

Query: 65  CVTYVRNITDI-------DDKII---ERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y RN+TD+       +D++I   ER R+ HP          +  K   +F +D   L
Sbjct: 61  -VKYARNVTDVGHLRETGEDRMIVGAERLRK-HPME--------VADKYMMEFFRDMDAL 110

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P  QPRA+ HIP++I  ++ ++  G+ Y  +  + FD S  P+YG  S  K +E  
Sbjct: 111 GIRRPDIQPRASMHIPEIIEAVEKLVDKGYGYVIDGSVYFDISKFPDYGKLSNIKPEELL 170

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           M  R+     KK+PADF LWK S P  P  W++PWGRG PGWHIECS MS  YLG+  DI
Sbjct: 171 M-HRIDPDPRKKHPADFALWKESPPSYPFSWKTPWGRGFPGWHIECSIMSMKYLGEQIDI 229

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG +LIFPHHENEIAQS      +     W+H G L + GR M KS GNFITI + L+
Sbjct: 230 HGGGQELIFPHHENEIAQSEALTGKKPFVKYWMHTGELTVGGRGMHKSYGNFITIQDALK 289

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------ 347
           T       +P+ V+RL +L  HYR P+D++ + + +A     K      +  +I      
Sbjct: 290 T-------YPSDVLRLFILSAHYRTPLDYSEKAMEQAAENFDKITNFYENLSLIAEEDRD 342

Query: 348 ---DPAV-----------LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPI 384
              DP++           + A+  D NT +A+  ++   ++     D         L  +
Sbjct: 343 KPRDPSLDELGDVFKQSFIEAMSEDFNTPNALAIVYDFMKKVNTRLDDIGHEQAAHLRQL 402

Query: 385 FNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           F  +  +LG+  ++ +      +   ++ LV+ R  L K   +  AD IR  L  +G ++
Sbjct: 403 FLETCRVLGLLQKIERRSSAAEVMEFVKTLVEVRRELRKRGMYDLADRIRNMLAERGIVV 462

Query: 443 EDYKNPDNGQRM 454
           ED K    G+R+
Sbjct: 463 EDTK---EGERI 471


>gi|297623875|ref|YP_003705309.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165055|gb|ADI14766.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 486

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 179/498 (35%), Positives = 258/498 (51%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F+ I P ++ MY+CGPTVY   H+G+AR  I+FDVL R L Y  G +
Sbjct: 6   LQLYNTLTRRKEPFEPITPGHVGMYLCGPTVYSEPHLGHARGPILFDVLRRYLEYL-GLR 64

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          +DK+++RA+ E    P+      I  K    +     +L
Sbjct: 65  -VRLVTNITDVGHLTDDADDGEDKLLKRAKLEQLE-PME-----IADKYFWAYFDAMAKL 117

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P   PRAT HI + I + Q ++  G AYE    + FD S+   YG  S R +D+  
Sbjct: 118 GVRRPDITPRATGHITEQIAMTQTLLERGLAYERGGNVYFDVSAWETYGELSGRNVDDLV 177

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKV 230
            GTR+  +  K +P DF LWKR+   E G    W SPWG G PGWHIECS MS+ YLG  
Sbjct: 178 EGTRIATRSDKDDPRDFALWKRA---EGGHLMRWPSPWGEGYPGWHIECSVMSTKYLGDA 234

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDLIFPHHE E+AQ+  A +    A +W+H   + LEG KM+KS G+F+T+ E
Sbjct: 235 FDIHGGGLDLIFPHHECELAQAKAAGK--PFARVWLHFNMVTLEGEKMAKSKGHFVTLEE 292

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQT 340
           L        R +    +R  +L THYR   DF+          ++RL E    L++  + 
Sbjct: 293 LF-------RRFDPIAVRFHLLGTHYRSVSDFSEASLRASAQGLRRLREGYAALARAVED 345

Query: 341 STSKGIIDPA-----VLSALYNDLNTVSAIQALHKLARES----TKNHDLLPIF------ 385
              +   DP+       +A+ +DLNT  A+  L+   RE+     +  D   +       
Sbjct: 346 GGDED-ADPSPYRERFEAAMNDDLNTAQALAVLYDALRETNAALARGADQATLRAAKRFF 404

Query: 386 -NASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            +A+  +LGI         +   +S  +E +  +R      + F++AD IR++L + G +
Sbjct: 405 DDAAGGVLGILGGAAETQGDAELVSGLVELISAQRQEARLRRDFATADAIRERLAALGIV 464

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           LED   PD      RWK+
Sbjct: 465 LED--TPDG----VRWKR 476


>gi|256844496|ref|ZP_05549982.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293381071|ref|ZP_06627092.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312977950|ref|ZP_07789696.1| cysteine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256613574|gb|EEU18777.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290922371|gb|EFD99352.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310895257|gb|EFQ44325.1| cysteine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 477

 Score =  283 bits (724), Expect = 4e-74,   Method: Compositional matrix adjust.
 Identities = 177/503 (35%), Positives = 265/503 (52%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +       F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAENFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +  P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQS-EAKTGKKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSK 344
             R     V+R  M    YR  I+++ + L +A  +L ++  T             S   
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTLTNINYRLEDDTASEES 347

Query: 345 GIIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------- 390
             +  A+++       A+ +D N  +A+ A+          +DLLP+ NA+A+       
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAI----------YDLLPVVNANANAARADKQ 397

Query: 391 --------------ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                         + G++   +C ++   N    I+ LV++R      K ++++D IR 
Sbjct: 398 ELQKFKEKLASWLLVFGVDTNKLCVKNAGSN-DDEIDALVKKRDEARANKDWATSDQIRD 456

Query: 434 QLESKGFILEDYKNPDNGQRMTR 456
           QL+  G  ++D   P  G R TR
Sbjct: 457 QLKEMGITIQD--TP-QGTRWTR 476


>gi|238853164|ref|ZP_04643551.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834218|gb|EEQ26468.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 472

 Score =  283 bits (724), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 166/478 (34%), Positives = 254/478 (53%), Gaps = 56/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        +  +  + F++DT  L     T  PR
Sbjct: 62  -VKYVSNFTDVDDKMINEARKEHTTV------GELADRYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIQEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 175 EQSKKEDPIDFALWKAQKEDDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKKKEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDP 349
             +     V+R  M    YR PI+++   L +AE +L ++  T           +  ++ 
Sbjct: 289 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLMDEQETLED 346

Query: 350 AVL------------SALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASA---- 389
           ++L             A+ +D N  +A+  ++ L         KN    P    +     
Sbjct: 347 SILRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLTSNLNTHLQKNQVDKPALKKAKKLLL 406

Query: 390 ---HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               I G+   ++    +  I +  +V +R    K K ++ +D +R +L++KG ++ED
Sbjct: 407 AWLEIFGVSFNEKQTENDDEIEV--MVAKRDEARKNKNWAESDRLRDELQAKGIVIED 462


>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 458

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 171/464 (36%), Positives = 245/464 (52%), Gaps = 68/464 (14%)

Query: 30  VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS 89
           +CGPTVY + HIGNAR    FDV+ R LRY  G + V YVRN TD+DDKII +A  E   
Sbjct: 1   MCGPTVYSYIHIGNARTFTSFDVVVRYLRYR-GYR-VHYVRNYTDVDDKII-KAAHETGE 57

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
            P+      +  +  + F  DT  L  + P   P+ + H+P+++ +I+ ++  G AYE+ 
Sbjct: 58  EPV-----ALAGRFVKIFQDDTRALHLVEPDVAPKVSEHLPEILRIIETLVAKGVAYESQ 112

Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
            ++ F  SS P Y   S+RK+D+   G RV     K+ P DF LWK + P EP W+SPWG
Sbjct: 113 GDVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQKREPLDFALWKAAKPGEPSWDSPWG 172

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
           +GRPGWHIECSAMS+ YLG+ FDIHGG LDLIFPHHENEIAQS  A   +  A  W+H G
Sbjct: 173 KGRPGWHIECSAMSAKYLGESFDIHGGALDLIFPHHENEIAQSEAASG-KPFAKYWMHCG 231

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           FL++EG KMSKS GN + + + L           A  +R   L THYR P+ F+ + + +
Sbjct: 232 FLDIEGAKMSKSLGNVVRLRDALTRVD-------AEALRFFFLSTHYRHPLHFSDKAIAD 284

Query: 330 AEILLSKWPQT-----------STSKGII--DPAVL-----SALYNDLNTVSAIQALHKL 371
           +E  L  + +T              +G +  +P        +A+ +D N   A+ AL  L
Sbjct: 285 SEYRLEYFYETLRKVDERVGGKDFGQGPLHGEPGRFLQEFEAAMDDDFNCPGALGALSGL 344

Query: 372 ARESTKNHDLLPIFNAS----------------AHILGI--------------EVCKEHL 401
                +  D  P+ + +                + +LG+                 KE  
Sbjct: 345 FGLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVLGLFEDDPTQWLLRRRDRAVKE-- 402

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + I +A +E+L+ ER    K K F+ AD +R +L+ +G  + D
Sbjct: 403 -RGIDVAQVERLLSERNEARKSKNFAEADRLRSELKGQGVEIMD 445


>gi|116629010|ref|YP_814182.1| cysteinyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282852713|ref|ZP_06262055.1| cysteine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311111194|ref|ZP_07712591.1| cysteine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273992|sp|Q045X8|SYC_LACGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116094592|gb|ABJ59744.1| cysteinyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282556455|gb|EFB62075.1| cysteine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066348|gb|EFQ46688.1| cysteine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 472

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 166/478 (34%), Positives = 254/478 (53%), Gaps = 56/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        +  +  + F++DT  L     T  PR
Sbjct: 62  -VKYVSNFTDVDDKMINEARKEHTTV------GELADRYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIQEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK +    E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 175 EQSKKEDPIDFALWKAQKDDDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQS-EAKTGKKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDP 349
             +     V+R  M    YR PI+++   L +AE +L ++  T           +  ++ 
Sbjct: 289 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLMDEQETLED 346

Query: 350 AVL------------SALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASA---- 389
           ++L             A+ +D N  +A+  ++ L         KN    P    +     
Sbjct: 347 SILRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLTSNLNTHLQKNQVDKPALKKAKKLLL 406

Query: 390 ---HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               I G+   ++    +  I +  +V +R    K K ++ +D +R +L++KG ++ED
Sbjct: 407 AWLEIFGVSFNEKQTENDDEIEV--MVAKRDEARKNKNWAESDRLRDELQAKGIVIED 462


>gi|325968781|ref|YP_004244973.1| cysteinyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707984|gb|ADY01471.1| cysteinyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 503

 Score =  283 bits (723), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 180/475 (37%), Positives = 248/475 (52%), Gaps = 46/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNT+ + +     + P   R+YVCG T YD  H+G+AR  + +D+L R L Y   E 
Sbjct: 24  IIVYNTVSKNLERITLLRPGLARIYVCGLTPYDSMHVGHARTFVFYDILRRYLEYLGVE- 82

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TDIDDKII +A+QE  S  IN    +  S+  ++F     +L        P+
Sbjct: 83  -VRFVTNFTDIDDKIINKAKQEFGSDLINRWYEV-PSRYIKEFFDAIDKLYVKRAYAYPK 140

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T +I  M+  IQ ++    AY + +  + FD + +P YG FS +KI++   G RV  + 
Sbjct: 141 VTENISDMLKWIQELVGKDLAYVSPDGSVYFDITKVPRYGEFSGQKIEDLIAGARVEPEP 200

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF LWK  +  EP W SPW  GRPGWH+EC  MSS YLG  FDIHGGG DLIFP
Sbjct: 201 GKKNPLDFALWKSWSEGEPWWNSPWSPGRPGWHLECVVMSSKYLGVPFDIHGGGQDLIFP 260

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     I+  A  WIH G + ++G+KMSKS GN I I ++L  KK+ G    
Sbjct: 261 HHENEIAIARVYFGIDYFAKYWIHVGLVTIKGQKMSKSLGNIIPIMDVL--KKYDGE--- 315

Query: 304 APVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             V+RL   M  YR+P+DF          ++  +  A  +L++    +   G  D  +LS
Sbjct: 316 --VLRLYYSMAQYRKPMDFDPDALDQVRNSLMSIYAAYDMLTEVINEAPDTGDEDNKLLS 373

Query: 354 -----------ALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
                      +L ND+NT  A+ AL   AR  T                + L  F   A
Sbjct: 374 RVNDFVNSFEESLNNDINTSGAVAALMDFARYITSTVIYNTQHFSRTALMNALTAFTDLA 433

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +ILGI + +  L  +I   IE L++ R  L   K F  AD IR +L   G ++ D
Sbjct: 434 NILGI-LNRTRLPPSIISLIEALIRVRAQLRARKMFDLADEIRNELGRLGVVISD 487


>gi|254422183|ref|ZP_05035901.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189672|gb|EDX84636.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 486

 Score =  283 bits (723), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 173/488 (35%), Positives = 252/488 (51%), Gaps = 62/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F+ + P  + MY CG TVYD+ H+G+AR  IV+D + R L +     
Sbjct: 3   VVIYNTLSRQKEAFKPLSPEQVTMYCCGVTVYDYCHLGHARSYIVWDTIRRYLSWR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RARQE      N ++  +  + T  + +D  RL  L       
Sbjct: 61  NVRYVQNFTDIDDKILNRARQE------NSSMEAVAKEYTTAYFEDMARLNILEADEYTY 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG--TRVPEK 182
           AT+ I  +  LI  +   G+AY A  ++ +       YG  S RK+D+ + G   RV  +
Sbjct: 115 ATHTIDGIKRLIHQLEQKGYAYSAKGDVYYSVRKFEGYGKLSGRKLDDMEAGRSGRVGTQ 174

Query: 183 YH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK + P EP WES WG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 ADSIKQDPFDFALWKSAKPDEPAWESTWGPGRPGWHIECSAMVRDRLGDTIDIHMGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  A  W+HNG +N++G KMSKS GNF TI  LL+ +     
Sbjct: 235 QFPHHENEIAQSEAATG-KPLATYWMHNGMVNVDGTKMSKSLGNFTTIRNLLDAE----- 288

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTS 343
           + P P+ +R+ ++ + YR P+DFT + +  A+   S                 W + +  
Sbjct: 289 AAPDPMAVRMFVMQSQYRMPLDFTEEAIVAAKKGWSTLNEGLNFGVRHGEDLGWAKAAAD 348

Query: 344 KGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-------- 388
           +  +D    +A       + +D NT  AI  L  LA+E  +  +++    A+        
Sbjct: 349 EIAVDALDQAAVEQFRISMDDDFNTPGAIAVLFGLAKELQRQSNVIIHEGAADANPAELQ 408

Query: 389 ---------AHILGIEV-CKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                    A +LG+E    E ++  +     IE L+ +R    + K ++ +D IR +L+
Sbjct: 409 QQWQTLVTLAGVLGLEAQAIESVDAGVLSEAEIETLIAQRANAKQAKNYAESDRIRDELK 468

Query: 437 SKGFILED 444
           ++G  L D
Sbjct: 469 AQGITLID 476


>gi|225620434|ref|YP_002721691.1| cysteinyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254765180|sp|C0R1J9|SYC_BRAHW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225215253|gb|ACN83987.1| cysteinyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 474

 Score =  282 bits (722), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 178/497 (35%), Positives = 263/497 (52%), Gaps = 63/497 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR-YYY 61
           K I  YN+L R+   F+ I+ + + MY CGPTVY++AHIGN R  I  D+L R+L  Y Y
Sbjct: 2   KDIVFYNSLTREKEVFKPINANEVGMYSCGPTVYNYAHIGNFRAYIFSDLLRRVLEDYGY 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V  V N+TD+DDK I+ +++ H  I +ND     T K  + F +D   L     T 
Sbjct: 62  N---VKLVMNLTDVDDKTIKNSKENH--ISLND----YTKKYKEAFFEDIKTLGIKKATV 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM-----G 176
            P AT+HI +MI +I+ +  +GH YE++  + F  S+ P YG  +   +D+Q++     G
Sbjct: 113 NPAATDHIKEMINIIELLKKNGHTYESDGSVYFKISTFPQYGELAN--LDKQELLDGASG 170

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
             + ++Y K+N +DF+LWK  T  +    W+SP+G+GRPGWHIECSAMS  YLGK FDIH
Sbjct: 171 RVLNDEYDKENASDFVLWKAYTEDDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIH 230

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+D  FPHHENEIAQ+  A   EK  N W+H   L ++G KMSKS GNF T+ +LL+ 
Sbjct: 231 TGGVDNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLD- 288

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGI 346
                +      IR +++ +HYR+ ++FT++ + +++  + +            +T    
Sbjct: 289 -----KGLSPEAIRYSLINSHYRKQLNFTIEGIKQSQSAIDRVNDLIFRLKDINNTESNE 343

Query: 347 IDPAVLSAL-----------YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           I+  +L  L           YNDLN   A+  L  L +    + D + +    A +  IE
Sbjct: 344 INENLLKELEVSNEKFSDSIYNDLNISEALGILFTLVKTVNTSFDSINVNTRDAILKFIE 403

Query: 396 VCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                +            N      I KL++ER I  K K +  AD IR QL S G  + 
Sbjct: 404 RVNNIINCFNMGDTDKKSNNEDEDKINKLIEERTIAKKEKNYQKADEIRNQLLSMGIEIM 463

Query: 444 DYKNPDNGQRMTRWKQK 460
           D        +  +WK+K
Sbjct: 464 D------TPQGVKWKRK 474


>gi|300870684|ref|YP_003785555.1| cysteinyl tRNA-synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688383|gb|ADK31054.1| cysteinyl tRNA-synthetase [Brachyspira pilosicoli 95/1000]
          Length = 469

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 178/491 (36%), Positives = 257/491 (52%), Gaps = 58/491 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR-YYYGE 63
           IK YN+L R+  EF+ ++   + MY CGPTVY++AHIGN R  I  D++ R+L  Y Y  
Sbjct: 2   IKFYNSLTRQKEEFKPMNEKEVGMYSCGPTVYNYAHIGNFRAYIFSDLVRRVLEDYGYN- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V N+TD+DDK I  +++ H S+      S  T K    F +D   L     T  P
Sbjct: 61  --VKLVMNLTDVDDKTIRNSKENHISL------SEYTKKYKDAFFEDIKTLRIKPATVNP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS---RRKIDEQKMGTRVP 180
            AT HI +MI +I+ +  +GH YEA+  I F  S+ P YG  +   ++++ E   G    
Sbjct: 113 SATEHINEMIDIIKLLEKNGHTYEADGSIYFKISTFPEYGELANLDKQELKEGASGRVSS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K+N +DF+LWK  T  E G   W+SP+G+GRPGWHIECSAMS  YLGK FDIH GG
Sbjct: 173 DEYDKENASDFVLWKAYTE-EDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D  FPHHENEIAQ+  A   EK  N W+H   L ++G KMSKS GNF T+ +LL     
Sbjct: 232 VDNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLL----- 285

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIIDPAV 351
             +   A  IR +++ +HYR+ ++FT++ + +++  + +        +        D AV
Sbjct: 286 -NKGLSAEAIRYSLMNSHYRKQLNFTIEGINQSQSAIDRVNDLIFRLKDVNKTDADDSAV 344

Query: 352 LSAL-----------YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           +  L           Y+DLN   A+       +    + D + + +  A I  IE     
Sbjct: 345 MKELEEANKNFFESIYDDLNVSEALGVFFSFIKSINISFDSINVSSRDAIIKFIERVNNI 404

Query: 401 LN-----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           +N            +    I KL++ER +  K K +  AD IR +L S G  + D  N  
Sbjct: 405 INCFNMNGEKEIESSEEEKINKLIEERTLAKKEKNYKRADEIRDELNSMGIEIMDTPNG- 463

Query: 450 NGQRMTRWKQK 460
                 RWK+K
Sbjct: 464 -----VRWKRK 469


>gi|11498023|ref|NP_069247.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
 gi|3122884|sp|O29836|SYC_ARCFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2650218|gb|AAB90823.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
          Length = 467

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 179/489 (36%), Positives = 252/489 (51%), Gaps = 59/489 (12%)

Query: 5   IKIYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++YNTL RKI + + I D   ++MYVCG T YD++HIG+AR  + FDV  R L Y   E
Sbjct: 1   MEVYNTLSRKIEKLEDIVDGKRVKMYVCGITAYDYSHIGHARSAVFFDVFRRYLEYLGYE 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N TD+DDKII RA +E  +         +  K  ++++KD   L    PT+QP
Sbjct: 61  --VVYVQNFTDVDDKIINRAVKEGKTQ------KEVAEKFIEEYLKDMEALNVKKPTYQP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           + T HIP +I  IQN+I  G+AY  + ++ F   +  +YG  S++ ++E       P++ 
Sbjct: 113 KVTEHIPDIIEFIQNLIEKGYAYVIDGDVYFHVPAFEHYGELSKQSLEELNRHRIEPDE- 171

Query: 184 HKKNPADFILWKRSTPM----EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K++  DF LWK +       +  ++SPWGRGRPGWHIECS MS+ YLG  FDIHGGG D
Sbjct: 172 RKRDVKDFALWKSAKEADLKAQAVFDSPWGRGRPGWHIECSVMSAKYLGVPFDIHGGGKD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS     +E    IW+HN F+ ++G KMSKS GN + I ++L+      
Sbjct: 232 LIFPHHENERAQSFARFGVE-PVKIWVHNDFIRIKGEKMSKSLGNIVRIRDVLQ------ 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----------------EILLSKWPQTSTS 343
             +   V+R  +L  HYR P+D+T + L  A                EI   K       
Sbjct: 285 -RYEGEVLRYFLLTAHYRSPLDYTEEALERAKRAYEYLRSALINLDMEIAYLKTFGDRKE 343

Query: 344 KGIIDPA-----VLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASA 389
              +D          A+  DL+T  AI  LH+ A    K+          +L   F    
Sbjct: 344 GNQVDVEDYIRRFEEAMNRDLHTPDAIAVLHEFAGLINKSLYELSLNQAEELYEAFKRLC 403

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+    E +        EK+V ER    K + F  AD IR +   +G  L D   P 
Sbjct: 404 GVLGLFEKMERVPALSREDAEKVV-ERERARKERNFELADAIRDEFAKRGIRLID--TP- 459

Query: 450 NGQRMTRWK 458
              + TRW+
Sbjct: 460 ---KGTRWR 465


>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 177/489 (36%), Positives = 258/489 (52%), Gaps = 63/489 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++ +YNT+ +    F+ I+P  I MYVCG T YD++HIG+AR  + FD+LYR LR+  
Sbjct: 5   KPELTLYNTMTQLKEVFKPINPGKIGMYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLG 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TD+DDK  +   +     P++     ++++  ++++ D T L CL PT 
Sbjct: 65  YE--VHYVRNFTDVDDKAKKCGEK-----PLD-----LSNRFCEEYLLDMTALQCLIPTR 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR ++H+  +I +I+ II +G  Y    ++ F     P+YG  S +++D  + G RV  
Sbjct: 113 QPRVSDHMEHIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LW  +   EP WESPWG GRPGWHIECSAMS+HYL   FDIHGGG DL 
Sbjct: 173 DSRKRNPADFALWNAAKSGEPSWESPWGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLK 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG +     KM KS  NF TI E+  T K+   +
Sbjct: 233 FPHHENEIAQTCAACE-DSGVNYWLHNGHVTNNNVKMGKSLDNFFTIREI--TAKYHPLA 289

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------------------------SK 336
                +R  ++   YR P++++V +L  +   L                          K
Sbjct: 290 -----LRHFLMSAQYRSPLNYSVSQLESSSDALYCAYQTLEDLVKYLSPYREEMSGDVGK 344

Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-- 394
             QT+ +K +I   V +AL     ++S ++ + K  R S     L+ +  A   +L +  
Sbjct: 345 TQQTAEAKEMIK-KVKNALKFINVSISKLKKIQKKQRMSLIV-SLVEVEKAVREVLDVLG 402

Query: 395 --------EVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                   E  KE   K ++ A      + + + ER +  K K F  +D IR+ L +KG 
Sbjct: 403 LLTTLSYDEFLKEMKQKALTRAGIGEEEVLRRIDERKLARKNKDFKRSDQIRELLAAKGI 462

Query: 441 ILEDYKNPD 449
            LED    D
Sbjct: 463 ALEDIPGKD 471


>gi|113954599|ref|YP_730137.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881950|gb|ABI46908.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 498

 Score =  282 bits (722), Expect = 7e-74,   Method: Compositional matrix adjust.
 Identities = 181/501 (36%), Positives = 249/501 (49%), Gaps = 78/501 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           ++  N+L  +   F+ ++P    +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 4   LRFTNSLTSRTEAFEPLEPGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGYD- 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY++N TDIDDKI+ RA +E  ++        ++ +N + F  D  RL  L     
Sbjct: 63  ---VTYIQNYTDIDDKILNRASEEGSTM------QAVSERNIEAFEIDMGRLNILPADRM 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
           PRAT  I  +  LI  +   G AY ++ ++ FD S   +YG  S R  +EQ+ G    T 
Sbjct: 114 PRATCCIEGIQTLIAELETKGAAYSSDGDVYFDISKAKDYGKLSGRDPNEQQQGASGRTA 173

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  KK+P DF LWK S   EP W+SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 174 DGEESRKKHPFDFALWKGSKVGEPSWDSPWGPGRPGWHIECSAMVRQELGLTIDIHLGGG 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+     A +W+HNG +N+ G KMSKS GNF TI  LLE+    
Sbjct: 234 DLVFPHHENEIAQSETANGA-PLARLWMHNGMVNVGGTKMSKSLGNFTTIRALLES---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQ----------------RLTEAEILLSKWPQ-TS 341
                A  +RL +L  HYR+P+DFT +                +L E      +W   T+
Sbjct: 289 --GLSAMALRLFVLQAHYRKPLDFTAEALEASTTGWKGLNAALKLGETHAAALEWSDHTA 346

Query: 342 TSKGIIDPA-------------VLSALYNDLNTVSAIQALHKLAR--------------- 373
            S   +                  +A+ +DLN+  A+  L +LAR               
Sbjct: 347 LSNAAVQAGRNAQGPFEDLEQRFTAAMDDDLNSSGALAVLFELARPLRGLANRLDRGDQP 406

Query: 374 -----ESTKNHDLLPIFNASAHILGI--EVCKEHLNKNISI---AIEKLVQERLILLKMK 423
                E T+ H    +    A +LG+  E  +   ++N  +   AIE+ +  R    + K
Sbjct: 407 EQPGEELTQLHSRWLLLRELAAVLGLRSETDESQPSENSGVDAQAIEQAIANRKAAKQEK 466

Query: 424 KFSSADYIRKQLESKGFILED 444
            +  AD IRK L  +G  L D
Sbjct: 467 NYQEADRIRKSLSDQGIELID 487


>gi|88603422|ref|YP_503600.1| cysteinyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88188884|gb|ABD41881.1| cysteinyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 423

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 174/444 (39%), Positives = 246/444 (55%), Gaps = 32/444 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL R +  FQ + P  + ++VCGPTVY++ H+G+AR  +VFDVL + LR+   E 
Sbjct: 1   MQLYSTLSRMVEPFQTLYPDRVSLFVCGPTVYNYPHLGHARTYVVFDVLAKYLRWTGQE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII RA++E   I   D    +  K  ++++KD   L   + ++  R
Sbjct: 60  -VLYIQNITDVDDKIINRAQEE--KISQKD----LARKFEREYIKDMLSLGIDSVSYHAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I  I+ ++  G  Y     + F+  S P  G  S +  D  K  +RV +   
Sbjct: 113 ATTHIPEIINQIERLVGIGVGYITETGVYFNIDSFPRNGELSGQSKD--KRISRVTDT-K 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NPADF+LWKR    E  W+SPWGRGRPGWHIE +A++  Y G+ +DIHGGGLDLIFPH
Sbjct: 170 KHNPADFVLWKRGEYGEYTWDSPWGRGRPGWHIEDTAITEKYFGQQYDIHGGGLDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ    +        W+H GFL +EG KMSKS GNFI I + L+T       W  
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWMHTGFLTVEGEKMSKSLGNFIKIQDALKT-------WDK 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----AVLSALYNDLN 360
            +IR  +L++HYR P+  + + L  A+  L      + +     P    A ++A+ +DLN
Sbjct: 283 DIIRYFILLSHYRSPLQVSEEGLLNAKKALEHIRAIAITDNGPYPEGRDAFIAAMESDLN 342

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T +AI A+H LA         L        ILGI    E      S  +  L   R  L 
Sbjct: 343 TPNAIAAIHALAAHGD-----LEALIEYGEILGIRFLPE-----TSAPLSILQDIRAELR 392

Query: 421 KMKKFSSADYIRKQLESKGFILED 444
             K+F  AD IRK++   G  + D
Sbjct: 393 ASKQFEIADMIRKKIADAGIQVTD 416


>gi|71892086|ref|YP_277816.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|109894884|sp|Q493A1|SYC_BLOPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71796192|gb|AAZ40943.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 473

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 187/482 (38%), Positives = 257/482 (53%), Gaps = 63/482 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL +K  +F  I+   I++YVCG TVYD  H+G+AR  IVFD + R LR+   + 
Sbjct: 2   LKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V+YVRNITDIDDKII+RA +       N+    +T++  Q+   D   L  L P ++P+
Sbjct: 61  -VSYVRNITDIDDKIIKRAYEN------NETTQQLTNRMIQEMHLDLDALNILRPNYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRR----KIDEQKMGTRV 179
            T HI  +I  I  +I   HAY A N +I+F   ++ NYG  S +    KI +  +  ++
Sbjct: 114 VTEHIDIIIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKENPPKIHDNIL--KI 171

Query: 180 PEKYHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           P    KKNP DF+LWK++T      EP W SPWG GRPGWHIECSAM+    G   DIHG
Sbjct: 172 PNI--KKNPMDFVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHG 229

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHH+NEIAQS CA      ANIW+H+G L L   KMSKS  NF TI ++L   
Sbjct: 230 GGSDLIFPHHDNEIAQSVCAHETS-YANIWMHSGLLLLNYEKMSKSLNNFFTIRDIL--- 285

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQTSTS 343
               + +    IR  ++  HYR  + +    L  A+  L +             P    +
Sbjct: 286 ----KHYDPETIRFFLMSAHYRSQLKYNDNNLKNAQTSLKRLYIALRDTNPTIQPNGGDN 341

Query: 344 KG-IIDPAVLSALYNDLNTVSAIQAL----HKLARESTKNHDLLPIFNAS-----AHILG 393
           +G       +S + +D NT  A   L    H+L     K H LL    A+     A+I+G
Sbjct: 342 EGEYFISKFISKMNDDFNTPEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANIIG 401

Query: 394 I----------EVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +          ++  +H NKN     I+KL+Q R +  K  ++  AD IRK+L   G  L
Sbjct: 402 LLHQNPEIFLKKITLKH-NKNRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITL 460

Query: 443 ED 444
           ED
Sbjct: 461 ED 462


>gi|307710644|ref|ZP_07647077.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307618587|gb|EFN97730.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 423

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 173/447 (38%), Positives = 241/447 (53%), Gaps = 43/447 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ H+GNAR  + FD + R   Y   E  V Y+ N TD+DDKII RA++E 
Sbjct: 1   MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE--VAYISNFTDVDDKIINRAKEEG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            + P       +  K    F +D T L     T  PR    +  +I  ++++I  G AYE
Sbjct: 59  IT-PQE-----VADKYIAAFREDVTALGVKRATCHPRVVEFMTDIIRFVEDLIEKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEKYHKK-NPADFILWKRSTPMEPGW 204
           +  ++ F      NY   + + ++  EQ    R  E+  +K NP DF LWK + P E  W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLEQGASGRTDEETARKENPVDFALWKAAKPGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-AN 263
            SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH NEIAQS    +  KT AN
Sbjct: 173 NSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEA--KTGKTFAN 230

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGF+N++  KMSKS GNFIT+++ L+T           V+R      HYR+PI+FT
Sbjct: 231 YWMHNGFVNIDNVKMSKSLGNFITVHDALKT-------LDGQVLRFFFATQHYRKPINFT 283

Query: 324 VQRLTEAEILLSKWPQTSTS--KGIIDPAVL--------SALYNDLNTVSAIQALHKLAR 373
            + + +AE  L     T      G +D   L        +A+  D N+ + I  + ++A+
Sbjct: 284 EKAVRDAETNLKYLKNTYEQPFTGTVDAQELQAFKDKFVAAMDEDFNSANGITVVFEMAK 343

Query: 374 E-STKNHDLLPIFNASAHIL---GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
             ++ N+D   +  A A +L   GI   +E L+      IE L+Q+R      + F++AD
Sbjct: 344 WINSGNYD-TSVKQALADMLEVFGIVFVEEVLDAE----IESLIQKRQEARANRDFATAD 398

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTR 456
            IR QL ++G  L D K   +G R TR
Sbjct: 399 QIRDQLAAQGIKLLDTK---DGVRWTR 422


>gi|222100839|ref|YP_002535407.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254781695|sp|B9KAQ8|SYC_THENN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221573229|gb|ACM24041.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 460

 Score =  282 bits (722), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 170/467 (36%), Positives = 244/467 (52%), Gaps = 44/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  + P  +RMYVCGPTVYD  H+GNARP +VFDV  R L Y  G +
Sbjct: 1   MRITNTLTGKKEEFVPLQPGVVRMYVCGPTVYDLIHVGNARPAVVFDVFRRYLEYR-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +  V+N TDIDDKII +A Q      +     ++      ++ +D   L        PR
Sbjct: 60  VIM-VQNFTDIDDKIINKANQ------LGVDPKMVADTFIAEYWRDAHALGIRPANFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  ++ +I+ ++  G+AY+    + FD      YG  S+++I++   G RV     
Sbjct: 113 TTDFVDDIVEIIEKLVERGYAYQTKTGVYFDVRKFKKYGELSKKRIEDLIAGARVEVDET 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K  P DF LWKR+ P EP W SPWG GRPGWHIEC+ MS   LG+ FDIH GG DL+FPH
Sbjct: 173 KNFPLDFSLWKRAKPGEPCWNSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE AQ+     +I   A  W+HNG +   G KMSKS GN  T+ E +  KK+G     
Sbjct: 233 HENEKAQAEALTGKI--FAKYWMHNGMVRFLGDKMSKSTGNIFTVREAV--KKYGRDG-- 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA--------EIL-------LSKWPQTSTSKGIID 348
              +R  +L  HYR P+DF+   L++         EIL       ++  P+ +T      
Sbjct: 287 ---LRYMILSKHYRSPMDFSEDLLSDYSKAVRRVWEILRRYESNGVTGIPKRNTVYEEYV 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------SAHILGI-EVC 397
              + AL +D NT  A+  L +LA+  +K+ +     NA             +LG+ ++ 
Sbjct: 344 NRFVEALDDDFNTPVAVSILFELAKNLSKSMEEGDQENALLFYHLIRREFGPVLGLFDLN 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +E         +  L++ R  L K K++  +D+IR +L   G IL D
Sbjct: 404 EERREVAGESLLGILIEVRETLRKEKRYDLSDWIRDRLRENGIILRD 450


>gi|318042057|ref|ZP_07974013.1| cysteinyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 489

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 159/394 (40%), Positives = 219/394 (55%), Gaps = 44/394 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ NTL R++ EF+ I+P  + +Y CG TVYD  H+G+AR  I +DVL R L   +   
Sbjct: 3   LKLTNTLTRRVEEFRPIEPGKVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYL--IWSGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKI+ RA +E  S+        ++ +N + FV D  RL  L     PR
Sbjct: 61  AVTFVQNYTDIDDKILNRAAEEGSSM------EAVSERNIEAFVADMARLNILPADRMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP-- 180
           AT  +  +  LI  +   G AY A+ ++ F       YG  S R +++QK     RV   
Sbjct: 115 ATRSLDAIRALISELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLEQQKDNAAGRVASE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EEARKQHPFDFALWKGTKPGEPSFPSPWGAGRPGWHIECSAMVREELGDTIDIHLGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   E  A+ W+HNG +N+ G+KMSKS GNF TI  LL+       
Sbjct: 235 VFPHHENEIAQSEAATGKE-LAHYWLHNGMVNVGGQKMSKSLGNFTTIRALLD------- 286

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA----- 354
           S  +P+ +RL  L  HYR+P+DFT + L  A    + W   + + G+      ++     
Sbjct: 287 SGVSPMTLRLFTLQAHYRKPLDFTAEALDAAA---TGWKGLNAALGLAGEIGAASNRATE 343

Query: 355 ---------------LYNDLNTVSAIQALHKLAR 373
                          + +DLNT +A+  L +LA+
Sbjct: 344 LPSALAAARERFAAAMNDDLNTSAALAVLFELAK 377


>gi|229819277|ref|YP_002880803.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511825|sp|C5BYT3|SYC_BEUC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229565190|gb|ACQ79041.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 474

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 165/479 (34%), Positives = 253/479 (52%), Gaps = 58/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++  R + +F+ ++P  + +Y+CG TV    H+G+ R +I FDVL R LR    + 
Sbjct: 3   LRLYDSATRAVRDFEPLEPGKVGIYLCGATVQGEPHVGHLRSVIAFDVLVRWLRRSGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT +RN+TDIDDKI+  A+     +P          ++ + F      +  L PT++PR
Sbjct: 62  -VTMIRNVTDIDDKIL--AKSAEAGVPW----WAWAYRHERAFSDAYDAVGNLPPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ +MI L+Q ++  G+AY   +  + FD  S+ +YGS +R+K+  + M T   E  
Sbjct: 115 ATGHVVEMIELMQRLVDRGNAYRGKDGNVWFDVRSLADYGSLTRQKL--ENMSTLEEESS 172

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF LWK   P +P    WE+P+GRGRPGWH+ECSAM+  YLG+ FDIHGGG+DL
Sbjct: 173 DKADPHDFALWKGLKPGDPETASWETPFGRGRPGWHLECSAMAYRYLGETFDIHGGGIDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQS  A      A  W+HN ++   G KMSKS GN++T  E L      GR
Sbjct: 233 RFPHHENEQAQSHAAGY--GFARYWLHNAWVTAGGEKMSKSLGNYLTAAEAL------GR 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQTSTSKG-------- 345
             PA V+R A+   HYR  ++FT   L EA +        +++  + +   G        
Sbjct: 285 V-PAVVLRYALASVHYRSSVEFTEATLAEARVTWERIAGFVTRAAELTGPVGDDGAARLA 343

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGI 394
             ++  A + A+ +DLN  +A+  LH+  R         E+      L        +LG+
Sbjct: 344 DVVLPIAFVEAMDDDLNVSAALAVLHEHIRLGNTALSSGEAGDAAAELSAVRGMLDVLGL 403

Query: 395 ---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    E     L   + + +E ++ +R      K ++ AD +R QL + G ++ED
Sbjct: 404 DPLAEPWVGEASATPLRGAVDVLVEGVLADRSAARAAKDWARADALRDQLAAAGVVVED 462


>gi|289705924|ref|ZP_06502301.1| cysteine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557352|gb|EFD50666.1| cysteine--tRNA ligase [Micrococcus luteus SK58]
          Length = 485

 Score =  282 bits (721), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 171/483 (35%), Positives = 249/483 (51%), Gaps = 56/483 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           + Y+T   +I +F+ + P    +Y CG TV    H+G+ R  IVFD+L R L    G + 
Sbjct: 4   RFYDTRTAQIRDFEPLVPGEASVYYCGATVQGMPHVGHVRSAIVFDILIRWLEAT-GLR- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPS-------IPINDAISIITSKNTQQFVKDTTRLACLA 118
           VT VRN+TDIDDKI++R+   H +        P  +    +  +  + F      L    
Sbjct: 62  VTSVRNVTDIDDKILDRSAASHEAGFEASDLYPAREPWWALAYRFEKAFDAAYLALGVRR 121

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT H+P+M  LI+ ++  GHAY A +   ++ FD  S   YG  +R+++++ + 
Sbjct: 122 PTYEPRATGHVPEMFALIERLMERGHAYPAQDGSGDVYFDVRSWERYGELTRQRVEDMQD 181

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                +   K++P DF LWK + P EP    WESPWG GRPGWH+ECSAMS+ YLG  FD
Sbjct: 182 APDA-DPRGKRDPRDFALWKGAKPGEPATAVWESPWGAGRPGWHLECSAMSTKYLGAEFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A   +  A  W+HNG +   G KMSKS GN I+  E+L
Sbjct: 241 IHGGGLDLRFPHHENELAQSTAAG--DGFARFWLHNGLVTYGGEKMSKSVGNTISPEEML 298

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDP 349
                 G + P   +R  +   HYR  +D+    L EAE  + +   +   + + G + P
Sbjct: 299 ------GMARPT-AVRYFLGQAHYRSQLDYRPGALDEAEAAVERIEGFTARARAAGAVPP 351

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNAS 388
                       A  +A+ +DLN   A+ ALH+  R                 L    A 
Sbjct: 352 APDGALADRVPAAFRTAMEDDLNVPQALAALHEAVRAGNSALAGQDLDAAAARLAEVEAM 411

Query: 389 AHILGIEVCKEHLNKN---ISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFI 441
             +LG++   E  +     +S A++ LV    + R      K +++AD IR  L + G +
Sbjct: 412 TAVLGLDDVPEGDDAAAGPVSDALDSLVRSQIEARAQARADKDWATADRIRDALAAAGVV 471

Query: 442 LED 444
           LED
Sbjct: 472 LED 474


>gi|320009404|gb|ADW04254.1| cysteinyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 466

 Score =  282 bits (721), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 160/470 (34%), Positives = 247/470 (52%), Gaps = 48/470 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++++T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 3   IRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKII++A ++      N     I  +N + F      L CL PT++PR
Sbjct: 62  -VTFIRNVTDIDDKIIKKAAEQ------NRPWWSIGYENERAFNDGYDVLGCLPPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +++ +I  GHAYEA+  + FD  S   Y   S + +D+ +  +   E   
Sbjct: 115 ATGHITEMIEMMRGLIERGHAYEADGNVYFDVRSYEGYLELSNQDLDDLRQPSGDNET-G 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIFPH
Sbjct: 174 KRDKRDFAMWKSAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HNG++ L G KMSKS  N + +++++       + W  
Sbjct: 234 HENEIAQAKAFG--DDFAKYWVHNGWVTLSGEKMSKSLDNSVLVSDMV-------KQWRP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI-----------LLSKWPQTSTSKGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE            ++ K      +   + PA   
Sbjct: 285 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGPVEAAAEVPPAFAE 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEH---- 400
           A+ +DL    A+  +H   R+                L    A   +LG++    H    
Sbjct: 345 AMDDDLGVPQALAIIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWAGE 404

Query: 401 ------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 L+  +   +  ++ +R    + K + +AD IR QL   G ++ED
Sbjct: 405 SDRGEDLHGVVDTLVRLVLDQRQSARERKDWPAADAIRDQLNQSGLVIED 454


>gi|333026131|ref|ZP_08454195.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332745983|gb|EGJ76424.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 466

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 167/477 (35%), Positives = 245/477 (51%), Gaps = 62/477 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   E 
Sbjct: 3   IRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V +VRN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VVFVRNVTDIDDKIINKSAEQGRPWWAIG-------YENERAFNAAYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +MI +++ +I  GHAYE+   + FD  S P Y   S +++D     +   E  
Sbjct: 114 RATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPGYLELSHQELDNLLQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIFP
Sbjct: 173 GKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQSKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRWR 283

Query: 304 APVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTSKGI 346
             V+R  +   HYR  I+++                 VQR+TE    L+       ++  
Sbjct: 284 PIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTE----LNGGEVAPAAE-- 337

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVC 397
           + PA   A+ +DL    A+  LH   R+                L    A   +LG++  
Sbjct: 338 VPPAFAEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPL 397

Query: 398 ----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      E L+  +   +  ++++R      K + +AD IR QL   G  +ED
Sbjct: 398 DPQWATGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIED 454


>gi|91204303|emb|CAJ71956.1| strongly similar to cysteinyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 492

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 179/512 (34%), Positives = 261/512 (50%), Gaps = 78/512 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K YN++ +K   F+ +   ++ MYVCGPTVYD  HIG+A+  + +DV+ R LRY   + 
Sbjct: 3   LKFYNSITKKKEVFKPLVEGHVNMYVCGPTVYDHPHIGHAKSYVSYDVIVRYLRYLGYKV 62

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
           C  YV+NITD+          DDKI+ RA++E    P     +++    T+ + +D   L
Sbjct: 63  C--YVQNITDVGHLTDNADAGDDKILARAQRERIE-P-----AVLVEIYTRSYFEDMDAL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P   PRAT HIP+ I LI+ +I  G+AY +N  + F+ S    YG  S RK ++ +
Sbjct: 115 NNLRPDISPRATAHIPEQIELIEKLISKGYAYVSNGSVYFEVSKYREYGKLSGRKQEDLE 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G R+     K+NP DF LWK++ P     W+SPWG G PGWH+ECSAMS  YLG+  DI
Sbjct: 175 AGARIEINLEKRNPNDFALWKKAEPAHIMRWKSPWGEGFPGWHLECSAMSMKYLGESLDI 234

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG++ +FPHHE EIAQS  A+ +      WIHN  + + G+KM KS GNF+T+ +   
Sbjct: 235 HGGGIENMFPHHECEIAQSEAANDM-TFVRYWIHNNMVTVNGQKMGKSLGNFVTLKDAF- 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAV- 351
                 + +    IR  +L THYR P+DF+ + L  A+  L +   T    +  ID A  
Sbjct: 293 ------KKYHPLTIRFFILSTHYRSPLDFSNEALDAADKGLKRLFNTIKRVRRQIDEAAN 346

Query: 352 ------------------LSALYNDLNTVSAIQALHKLARESTK------------NHDL 381
                             L+A+  D+NT  AI AL  L++E                 D+
Sbjct: 347 GETTVLVYEKLEEHKKAFLNAMDEDINTSGAIAALFDLSKEVNALLDSGEEVSKKCMEDI 406

Query: 382 LPIFNASAH-ILGIEVCKEHLNKNISIAIEK------------LVQERLILLKMKKFSSA 428
             ++      ILGI   ++ +  +I     +            L+  R  L K K F  +
Sbjct: 407 NSLYQELGDGILGIVPVRKEVKADIEDDFSEGDKSVLKEVMGVLIDTRNQLRKEKLFQLS 466

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           D+IR +L   G  LED       Q +T WK++
Sbjct: 467 DFIRNKLTEIGITLED------TQDVTLWKKR 492


>gi|15383990|gb|AAK96068.1|AF393466_2 cysteinyl-tRNA synthetase [uncultured crenarchaeote 74A4]
          Length = 462

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 176/450 (39%), Positives = 245/450 (54%), Gaps = 51/450 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I++Y+CG TVYD +HIG+AR +IVFDVL + L     E  V +V+N TD+DDKII RA +
Sbjct: 20  IKIYLCGVTVYDESHIGHARTIIVFDVLRKYLESKKVE--VDFVQNFTDVDDKIINRATK 77

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E      N     I+SK  + + +D   L     T+ P+AT HI  +I  I+ +I    A
Sbjct: 78  E------NVTAEEISSKYIENYFRDFEELNVKRATNYPKATEHIEDIIEFIKKLIDKEIA 131

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           Y   N + F  S    YG  S++KIDE + G+R+     KK+PADF +WK S  + P WE
Sbjct: 132 YVTKNGVYFAVSKFSEYGKLSKKKIDELQSGSRIQIDETKKDPADFAVWKFS-DINPTWE 190

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG+GRPGWHIECS MS  YLG+ FDIHGGG DLIFPHHENEIAQS     +   A IW
Sbjct: 191 SPWGKGRPGWHIECSVMSLKYLGENFDIHGGGRDLIFPHHENEIAQSEACTNL-PFAKIW 249

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G + + G KMSKS GN  +I ++LE       +W   +IRL  L  HY + ID++  
Sbjct: 250 MHVGMVTISGEKMSKSLGNTKSIKQVLE-------NWGPNIIRLFCLSGHYSKVIDYSED 302

Query: 326 RLTEAEILLSKWPQTST----------------SKGI--IDPAVLSALYNDLNTVSAIQA 367
            L E    L+KW Q  T                S+ +  I      +L +D NT  A+ A
Sbjct: 303 MLKEN---LTKWRQVETCYFELIHANNKNQENVSENVQKIGIEFDKSLEDDFNTHLALSA 359

Query: 368 LHKLARESTK----------NHDLLPI-FNASAHILGIEVCKEHLNKNISIAIEKLVQER 416
             +L +E+ +          N  ++   F   + ILG+ + +  +++N    I++L+  R
Sbjct: 360 FFQLVKETNRLAAAEKLGKENGAIIKKEFKRISAILGLTIPE--MSQNKIQEIDELILNR 417

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYK 446
               + K+F  AD IR +L      L D+K
Sbjct: 418 EKFREEKQFDKADKIRDELNKMNIELIDHK 447


>gi|302520121|ref|ZP_07272463.1| cysteinyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302429016|gb|EFL00832.1| cysteinyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 466

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 167/477 (35%), Positives = 245/477 (51%), Gaps = 62/477 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   E 
Sbjct: 3   IRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V +VRN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VVFVRNVTDIDDKIINKSAEQGRPWWAIG-------YENERAFNAAYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +MI +++ +I  GHAYE+   + FD  S P Y   S +++D     +   E  
Sbjct: 114 RATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPGYLELSHQELDNLLQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIFP
Sbjct: 173 GKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQSKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRWR 283

Query: 304 APVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTSKGI 346
             V+R  +   HYR  I+++                 VQR+TE    L+       ++  
Sbjct: 284 PIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRVEGFVQRVTE----LNGGEVAPAAE-- 337

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVC 397
           + PA   A+ +DL    A+  LH   R+                L    A   +LG++  
Sbjct: 338 VPPAFAEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPL 397

Query: 398 ----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      E L+  +   +  ++++R      K + +AD IR QL   G  +ED
Sbjct: 398 DPQWATGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIED 454


>gi|261252446|ref|ZP_05945019.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935837|gb|EEX91826.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 436

 Score =  281 bits (720), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 171/458 (37%), Positives = 244/458 (53%), Gaps = 47/458 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T+YD  HIG+ R  + FDV+ R LRY   +  +T+VRNITDIDDKII+RA +  
Sbjct: 1   MYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD--LTFVRNITDIDDKIIKRANENG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            S         +T +   +   D   L    P  +PRAT +I ++I L++ +I  G AY 
Sbjct: 59  ESC------DSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEIIELVETLIERGFAYV 112

Query: 148 ANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+N +++F+ +    YG  S + +++ + G RV  +  K++  DF+LWK S P EP WES
Sbjct: 113 ADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDFVLWKMSKPGEPTWES 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+S  LG  FDIHGGG DL FPHHENEIAQSCCA   +   N W+
Sbjct: 173 PWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQYV-NTWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF TI ++L         + A  +R  ++  HYR  ++++   
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTIRDVL-------GHYDAETVRYFLMSGHYRSQLNYSEDN 284

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLS---------ALYNDLNTVSAIQALHKLARE--S 375
           L +A   L +   +     +   AV           A+ +D NT  A   L  +ARE   
Sbjct: 285 LNQARSALERLYTSLRGLDLTVSAVGGEEYVARFNDAMNDDFNTPEAYSVLFDMAREINR 344

Query: 376 TKNHDLLPIFNAS------AHILGI------EVCKEHLNKNISIA-IEKLVQERLILLKM 422
            K  D+    +        A ++GI         K     +  +A IE L++ R      
Sbjct: 345 LKAEDVAAASSLGVTMRQLADVIGILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAS 404

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K +++AD  R +L   G +LED      G   T W++K
Sbjct: 405 KDWANADMARDKLTEMGIVLED------GPEGTTWRRK 436


>gi|15643482|ref|NP_228528.1| cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6831684|sp|Q9WZH8|SYC_THEMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4981244|gb|AAD35801.1|AE001743_3 cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 460

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 169/467 (36%), Positives = 245/467 (52%), Gaps = 44/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  I P  +RMYVCGPTVYD  H+GNARP +VFDV  R L Y  G +
Sbjct: 1   MRITNTLTGKKEEFVPIQPGVVRMYVCGPTVYDLIHVGNARPALVFDVFRRYLEYR-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +  V+N TDIDDKII +A Q      +      +      ++ +D   L        PR
Sbjct: 60  VIM-VQNFTDIDDKIINKANQ------LGVDYKTVADTFIAEYWRDAHALGIRPANFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  ++ +I+ ++  G AY+    + FD      YG  S++KI++   G RV     
Sbjct: 113 TTDFVEDIVEIIEKLVEKGFAYQTETGVYFDVRKFEKYGELSKKKIEDLIAGARVEVDET 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK++ P EP W+SPWG GRPGWHIEC+ MS   LG+ FDIH GG DL+FPH
Sbjct: 173 KKSPLDFSLWKKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE AQ+     ++   A  W+HNG +   G KMSKS GN  T+ E +  K++G     
Sbjct: 233 HENEKAQAEALTGKV--FARYWMHNGMVRFLGDKMSKSTGNIFTVREAV--KRYGRDG-- 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV----------- 351
              +R  +L  HYR P+DF+ + L +    + + W      +   D  +           
Sbjct: 287 ---LRYMILSKHYRSPMDFSEELLQDYSRAVKRVWEILGRYEKSGDIGIPKRNAVYEEYV 343

Query: 352 ---LSALYNDLNTVSAIQALHKLARESTKNHD-------LL---PIFNASAHILGI-EVC 397
              + AL +D NT  A+  + +LAR  +K  D       LL    I      +LG+ ++ 
Sbjct: 344 NRFVEALDDDFNTPVAVSLIFELARNLSKAMDDNDREDALLYYHLIRREFGPVLGLFDLN 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +E    +    ++ L++ R +L K K++  +D IR +L   G IL+D
Sbjct: 404 EEKKEVSSEELLKLLIEVRDVLRKEKRYDLSDRIRDRLREIGIILKD 450


>gi|239916923|ref|YP_002956481.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414621|ref|ZP_06246363.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511838|sp|C5C8X5|SYC_MICLC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239838130|gb|ACS29927.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 485

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 170/483 (35%), Positives = 250/483 (51%), Gaps = 56/483 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           + Y+T   +I +F+ + P    +Y CG TV    H+G+ R  IVFD+L R L    G + 
Sbjct: 4   RFYDTRTAQIRDFEPLVPGEASVYYCGATVQGMPHVGHVRSAIVFDILIRWLEAT-GLR- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPS-------IPINDAISIITSKNTQQFVKDTTRLACLA 118
           VT VRN+TDIDDKI++R+   H +        P  +    +  +  + F      L    
Sbjct: 62  VTSVRNVTDIDDKILDRSAASHEAGFEASDLYPAREPWWALAYRFEKAFDAAYLALGVRR 121

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT H+P+M  LI+ ++  GHAY A +   ++ FD  S   YG  +R+++++ + 
Sbjct: 122 PTYEPRATGHVPEMFALIERLMERGHAYPAQDGSGDVYFDVRSWERYGELTRQRVEDMQD 181

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                +   K++P DF LWK + P EP    WESPWG GRPGWH+ECSAMS+ YLG  FD
Sbjct: 182 APDA-DPRGKRDPHDFALWKGAKPGEPATAVWESPWGAGRPGWHLECSAMSTKYLGAEFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A   +  A  W+HNG +   G KMSKS GN I+  E+L
Sbjct: 241 IHGGGLDLRFPHHENELAQSAAAG--DGFARFWLHNGLVTYGGEKMSKSVGNTISPEEML 298

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDP 349
                 G + P   +R  +   HYR  +D+    L EAE ++ +   +   + + G + P
Sbjct: 299 ------GMARPT-AVRYFLGQAHYRSQLDYRPGALDEAEAVVERIEGFTARARAAGAVPP 351

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNAS 388
                       A  +A+ +DLN   A+ ALH+  R                 L    A 
Sbjct: 352 APDGALADRVPAAFRTAMEDDLNVPQALAALHEAVRAGNSALAGQDLDAAAARLAEVEAM 411

Query: 389 AHILGIEVCKEHLNKN---ISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFI 441
             +LG++   E  +     +S A++ LV    + R      K +++AD IR  L + G +
Sbjct: 412 TAVLGLDDVPEGDDAAAGPVSDALDSLVRSQIEARAQARADKDWATADRIRDALAAAGVV 471

Query: 442 LED 444
           +ED
Sbjct: 472 VED 474


>gi|261350960|ref|ZP_05976377.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860300|gb|EFC92598.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 448

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 172/466 (36%), Positives = 242/466 (51%), Gaps = 44/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+TL R    F+ ++ + I ++VCGPTVYD AHIG+ R  I FD + R   + Y   
Sbjct: 1   MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRY--WEYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII+R+++    IP  D    I  K  +++++D  +L         R
Sbjct: 59  TVFYIQNITDVDDKIIKRSKE--TGIPAGD----IARKFEKRYIEDMNKLNVTGVNLFAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+ ++I  IQ +I  G AYE  + + F   +   +G  S R I+E +    +  K  
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFEEFGKLSNRNIEELESHREIA-KTT 171

Query: 185 KKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           KKNP DF LWK R    EP W SPWG GRPGWHIE +A++ +Y G  +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EI Q             W+H GFLN+ G KMSKS  NFITI ELL       + + 
Sbjct: 232 HHEAEITQMEAVSGKSPMVRYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------KGIID 348
           A V R  +L THYR PIDF+ + L ++E  L K  +   S                 I  
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENVTSDYAPLKIAK 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
                ++ +D NT  AI A+  L  +S    D L            +    ILGI+   +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVFAVREFLDDVGFILGIDF--D 402

Query: 400 HLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGFILED 444
             +   S  +  L+ + R  L   K++  +D IR QL   G+ + D
Sbjct: 403 LKDSGSSDELLTLISDVRQELRNNKQYELSDKIRNQLTDLGYEISD 448


>gi|254796714|ref|YP_003081550.1| cysteinyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589939|gb|ACT69301.1| cysteinyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 484

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 148/320 (46%), Positives = 194/320 (60%), Gaps = 16/320 (5%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD  HIGN R  IV+D++YR+L   + E  V YVRNITD+DDKII  A  + 
Sbjct: 1   MYVCGPTVYDVPHIGNIRASIVYDIVYRVLLKLFPE--VVYVRNITDVDDKIITSASAQG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 D I++   +  + F +    L CL+PT +P+AT  I +MI +IQ +I  G+AY 
Sbjct: 59  VRC---DEIAL---RYERIFHEHLDLLNCLSPTVEPKATQSIGRMISMIQALIDRGNAYS 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
               + FD  S   YG  S+RK ++   G RV E  +KK+P DF+LWK    +   W SP
Sbjct: 113 VAGNVYFDVGSFAEYGVLSKRKKEQLVYGVRVEEDVNKKHPGDFVLWKSDDHVY--WPSP 170

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+   LG  FDIHGGG DL FPHHENE AQS CA+   K A  WIH
Sbjct: 171 WGKGRPGWHIECSAMTLATLGADFDIHGGGADLKFPHHENERAQSMCANPGSKFARYWIH 230

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NGFL ++G KMSKS GN + ++ L+E+           VIR  ++ THY +P+D+    +
Sbjct: 231 NGFLTVKGEKMSKSLGNVVNVDTLVES------GVTPNVIRFVLISTHYSKPLDWNDAMV 284

Query: 328 TEAEILLSKWPQTSTSKGII 347
            EA   L K+       G++
Sbjct: 285 GEAVNSLMKFKLALLDSGVL 304


>gi|302530720|ref|ZP_07283062.1| cysteinyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302439615|gb|EFL11431.1| cysteinyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 461

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 162/469 (34%), Positives = 243/469 (51%), Gaps = 45/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R   EF  +      +YVCG TV    HIG+ R M+ +DVL R L   +   
Sbjct: 3   LHLYDTATRAPREFTPVRSGTASIYVCGATVQGVPHIGHVRGMLNYDVLRRWL--LHSGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A       P  +      + + + F K    L CL P+  PR
Sbjct: 61  DVLLVRNVTDIDDKILTKAADA--GRPWWE----WAATHERAFEKAYEDLGCLPPSVTPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ QM+ L++ +I  GHAY  + ++ F   S P YG+ S +++DE + G   P +  
Sbjct: 115 ATGHVTQMVQLMERLIEAGHAYAVDGDVYFSVKSFPEYGALSGQQLDEVQQG-ETPTR-G 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIHGGG+DL+FPH
Sbjct: 173 KRDSRDFTLWKSAKPGEPSWPTPWGDGRPGWHLECSAMATNYLGAEFDIHGGGVDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS  A   +  A  W+HN ++ + G KMSKS GN ++I  +LE  +       A
Sbjct: 233 HENERAQSNAAG--DGFARYWLHNAWVTMSGEKMSKSLGNTVSIPAMLERYR-------A 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQT-STSKGIIDPAVLSALY 356
           P +R  ++  HYR  ++++   ++EA       E  L +     +   G +     +A+ 
Sbjct: 284 PELRYYLVQPHYRSTVEYSDGAVSEAAQGYRRIEAFLRRAESAGAVPVGEVAAEFAAAMD 343

Query: 357 NDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEH------- 400
           +DL T +A   +H   R         ++TK  +L         +LG++            
Sbjct: 344 DDLATPAAFAVVHNTVRDGNAALDSGDTTKALELAGTVRGMTGVLGLDPLSPDWADGGSD 403

Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             +   +   +E L+ ER      K F+ AD  R +L + G  +ED  N
Sbjct: 404 TPVRDALGTLVEALLAERQEARAAKDFARADAARDRLVAAGIAVEDTPN 452


>gi|293375371|ref|ZP_06621652.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645924|gb|EFF63953.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 446

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 168/465 (36%), Positives = 248/465 (53%), Gaps = 59/465 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNT  R+  EF+ I+ + +RMY+CGPTVY++ HIGNARP++ FD+++R  +Y   E  V
Sbjct: 3   IYNTYTREKEEFRPIEENKVRMYICGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +V N+TD+DDKII RA +E  +       + I+ K    F++    L  L  T  P+ T
Sbjct: 61  EFVSNVTDVDDKIINRAIEEGVTE------AQISEKYLNYFLECNKALNALPLTAMPKVT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +  MI  I  ++    AY  + ++ F    +  YG  S +KIDE ++G R+ E   K+
Sbjct: 115 ESMDSMIEFINQLVERDFAYAVDGDVYFRIDKVREYGQLSGKKIDELEVGARIAEDSKKE 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHH 245
           NP DF+LWK+ T     W+SPWG GRPGWH EC  M ++ + GK+ DIHGGG DL FPHH
Sbjct: 175 NPLDFVLWKK-TDKGITWDSPWGAGRPGWHTECVVMINNQFHGKI-DIHGGGTDLQFPHH 232

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS C       AN W+H G L L   KMSKS GN I + +L+E          A 
Sbjct: 233 ENEIAQSLCMYE-HNIANYWMHVGRLGLNNEKMSKSIGNVINVKDLIE-------QIDAN 284

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID--PAV-- 351
             RL ML  HYR+PI++T + +   ++ + +W +  ++           G +D  P+V  
Sbjct: 285 AFRLFMLSVHYRQPINYTEENI---QLAVKEWQKVKSTYDQLHLKLDLAGALDVEPSVVP 341

Query: 352 ---------LSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHIL 392
                    + AL +D NT +AI +L+ + +E  K          N   L       +I 
Sbjct: 342 EIEALMNQFVEALEDDFNTANAIASLYGVIKEINKMVRAKASDEANRYALMTLQNMTYIF 401

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           G ++ K+ L       ++   + R    K K F+ AD +R +L++
Sbjct: 402 GFDLNKKRLTDEERELMQAWEEAR----KAKDFAKADELRGKLQA 442


>gi|222444492|ref|ZP_03607007.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434057|gb|EEE41222.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
           DSM 2375]
          Length = 448

 Score =  281 bits (719), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 172/467 (36%), Positives = 241/467 (51%), Gaps = 46/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+TL R    F+ ++ + I ++VCGPTVYD AHIG+ R  I FD + R   + Y   
Sbjct: 1   MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRY--WEYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII+R+++    IP  D    I  K  +++++D  +L         R
Sbjct: 59  TVFYIQNITDVDDKIIKRSKE--TGIPAGD----IARKFEKRYIEDMNKLNVTGVNLFAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+ ++I  IQ +I  G AYE  + + F   +   +G  S R I+E +    +  K  
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFEEFGKLSNRNIEELESHREIA-KTT 171

Query: 185 KKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           KKNP DF LWK R    EP W SPWG GRPGWHIE +A++ +Y G  +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EI Q             W+H GFLN+ G KMSKS  NFITI ELL       + + 
Sbjct: 232 HHEAEITQMEAVSGKSPMVRYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------KGIID 348
           A V R  +L THYR PIDF+ + L ++E  L K  +   S                 I  
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENVTSDYAPLKIAK 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
                ++ +D NT  AI A+  L  +S    D L            +    ILGI+   +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVFAVREFLDDVGFILGIDFDLK 404

Query: 400 HLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +  +   I  + QE   L   K++  +D IR QL   G+ + D
Sbjct: 405 DTGSSDELLTLISDVRQE---LRNNKQYELSDKIRNQLTDLGYEISD 448


>gi|162448886|ref|YP_001611253.1| hypothetical protein sce0616 [Sorangium cellulosum 'So ce 56']
 gi|161159468|emb|CAN90773.1| cysS1 [Sorangium cellulosum 'So ce 56']
          Length = 529

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/376 (38%), Positives = 221/376 (58%), Gaps = 35/376 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL +K+       P  +RMY CGPT YD AH+G+ R  +  D+L R LR   G +
Sbjct: 4   LRLHDTLTQKLAPLAPRRPGEVRMYCCGPTTYDVAHVGHGRAALAPDILVRHLRAR-GLR 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TD+DDKI++R+  E    P++     ++++  + + +D   L CL P  +P+
Sbjct: 63  -VVYVRNVTDVDDKILQRS-AESGEPPMD-----LSARMARLYQEDVAALGCLTPDVEPK 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-----------EANNEIIFDTSSIPNYGSFSRRKIDEQ 173
            + HIP++I L++ +I  G AY               ++ +   S P+YG  S+R +DE 
Sbjct: 116 VSEHIPEVIALVERLIERGAAYVVERPGDVRDVRDVRDVYYSVRSFPSYGKLSKRNLDEL 175

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           ++G RV     K++P DF LWK   P   GW+SPWG+GRPGWHIECSAM+  YLG  FD+
Sbjct: 176 RVGARVGPCEDKRDPLDFALWKGVAPGGWGWDSPWGKGRPGWHIECSAMAGRYLGAGFDV 235

Query: 234 HGGGLDLIFPHHENEIAQSCCA-DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H GG+DL+FPHHENEIAQS  A       A+IWIHNGF+N++  KM+KS GNF+ + ++ 
Sbjct: 236 HCGGMDLVFPHHENEIAQSEAAHPEGAPLASIWIHNGFVNVDKEKMAKSLGNFVKLRDVY 295

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                  R+ P   +R  +L  HYR P++F   +  +  ++   +P    ++  +D    
Sbjct: 296 ------ARNDPE-ALRYFLLTVHYRGPLEFDTHKRDDGRVV---FPGVVEAERRVD---- 341

Query: 353 SALYNDLNTVSAIQAL 368
             LY  L+ +SA+ AL
Sbjct: 342 -YLYATLDRLSALSAL 356


>gi|327311486|ref|YP_004338383.1| cysteinyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947965|gb|AEA13071.1| cysteinyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 480

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 174/486 (35%), Positives = 257/486 (52%), Gaps = 57/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  +++ +F    P     YVCG T YD  H+G+ R  + FD+  R L     E+
Sbjct: 7   LRIYNTATKRMEQFSVRTPGIASGYVCGITPYDSVHVGHGRVYVFFDMFRRYL-----ER 61

Query: 65  CVTYVR---NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VR   N TDIDDKII RAR+E  +  +     +     ++ F  D  R   + P +
Sbjct: 62  LGLQVRLVVNFTDIDDKIINRAREEFGADSVKRWREVPERYISEYF--DVMRRLYVKPAY 119

Query: 122 Q-PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T ++  M+  I+ ++  G AY A +  + F+   +P YG FS ++I+E   G RV
Sbjct: 120 AYPRVTENVEDMLGWIKALVDKGFAYVAPDGSVYFEVGKVPRYGEFSGQRIEELVAGARV 179

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             +  K+NP DF LWK  +P EP W+SPW  GRPGWH+EC  MS+ +LG  FD HGGG D
Sbjct: 180 EPEPGKRNPLDFALWKSWSPGEPWWDSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGAD 239

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L   K+ G
Sbjct: 240 LIFPHHENEIAIARAMFGVDYFARYWIHVGYLTVRGEKMSKSLGNIITLREVL--SKYSG 297

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTSKG------I 346
            +     +RLA  M+HYR+P++F+ + L  AE ++        +  Q     G      +
Sbjct: 298 EA-----LRLAYAMSHYRKPMEFSFELLDRAEDMVKTLYTAYDELGQAVADAGEGGSEPV 352

Query: 347 IDP------AVLSALYNDLNTVSAIQALHKLARE--STKNH-----------DLLPIFNA 387
           ++P          AL +D +T  A Q L+  AR   ST  H           D+L  +  
Sbjct: 353 VEPFYKYVEGFYEALNDDFSTNEAAQRLYDAARYIISTVLHKIDKISREAVLDVLSKYVE 412

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+ + +  + K +  A++ LV+ R  L + +++  AD IR++L + G  L D+  
Sbjct: 413 MADVLGL-LERREVPKEVQEAVKALVEARARLRQERQYQLADQIRERLSALGVDLHDF-- 469

Query: 448 PDNGQR 453
              GQR
Sbjct: 470 ---GQR 472


>gi|311745980|ref|ZP_07719765.1| cysteine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126576191|gb|EAZ80469.1| cysteine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 496

 Score =  281 bits (718), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 183/498 (36%), Positives = 260/498 (52%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK   FQAI+P  + +YVCGPTVY  AH+G+ARP I FD + R L +   + 
Sbjct: 6   LKLYNTLSRKKENFQAINPPFVGLYVCGPTVYGDAHLGHARPAITFDTVNRYLTHL--DY 63

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD+          +DKI ++A+ E    P+      I  + T  + +D   L
Sbjct: 64  RVRYVRNITDVGHLQGDADEGEDKIAKKAKLEKLE-PME-----IAQQYTDSYHRDMALL 117

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKID 171
               P  +PRAT HIP+ I L++ I+  G AYE N  + FDT   +    YG  S R I+
Sbjct: 118 NTWKPNIEPRATGHIPEQIALVEAILKEGLAYEVNGSVYFDTLKYNEKTPYGRLSGRVIE 177

Query: 172 EQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGK 229
           E   G+R +  +  K+NP DF LWK + P     WESPWG G PGWH+EC+AMSS YLG 
Sbjct: 178 ELMSGSRDLDGQSEKRNPVDFALWKNAAPEHLMKWESPWGIGFPGWHLECTAMSSKYLGN 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGG+DL+FPHHE EIAQ    +  +   N W+HN  + + G+KM KS GNFIT+ 
Sbjct: 238 HFDIHGGGMDLMFPHHECEIAQGNACNH-QDPVNYWMHNNMITINGQKMGKSLGNFITLQ 296

Query: 290 ELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSKWPQ 339
           EL + + K   +++    IR  +L  HYR  +DF+   L  A+         + ++K  +
Sbjct: 297 ELFKGEHKLLEQAYSPMTIRYFILTAHYRSTLDFSNDALKAAQKGYKKLINGLRIAKMLE 356

Query: 340 TSTSKGIIDPAVLS-----------ALYNDLNTVSAIQALHKLARE--STKNHDLLPIFN 386
             TS   +D   +            A+ +D NT  AI  L  L ++  S     L P   
Sbjct: 357 YQTSDVPVDEKQIEQIENSITNAYRAMDDDFNTAQAIGHLFNLLKKINSIYTGQLKPA-- 414

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKL--------VQERLILLKMKKFSSA---------D 429
               + G EV  + ++  I+   + L         Q ++I L +  +S A         D
Sbjct: 415 ----VFGEEVFSKLISTFITFVEDILGLTEEKSDTQNKMINLLLTLYSEAKTARDYAKVD 470

Query: 430 YIRKQLESKGFILEDYKN 447
            IR  L+  GF+++D K+
Sbjct: 471 EIRAGLKDLGFVVKDMKD 488


>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
 gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
          Length = 502

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 150/336 (44%), Positives = 200/336 (59%), Gaps = 24/336 (7%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+   F+   P  + MYVCG T YD++HIG+AR  + FDVLYR   +   E  VTYVR
Sbjct: 1   MSREKEVFRPRIPGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFPFMGYE--VTYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TDIDDKII+RA        + D    ++++   +F +D   L CLAP+ +PR + +I 
Sbjct: 59  NFTDIDDKIIKRAND------LGDDPIELSNRFCDEFHRDMASLRCLAPSLEPRVSRNID 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDT-----SSIPN-YGSFSRRKIDEQKMGTRVPEKYH 184
           Q+I +I  I+ +G+ Y  +N  ++ +      + P+ YG  S RK+D+ + G RV     
Sbjct: 113 QIIKMISQILENGYGYVLDNGDVYFSLDKFVPAFPDSYGRLSGRKLDDNRAGERVAVDDR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF+LWK +   EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG+DLIFPH
Sbjct: 173 KLNPGDFVLWKANG--EPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEI QS  A   E     W+HNGF+ ++  KMSKS GNF TI E+ E        +  
Sbjct: 231 HENEIVQSRAACH-ESNVTYWMHNGFVTVDSEKMSKSLGNFFTIREVFEL-------YHP 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             +R  +L THYR PI+++  +L  A   L    QT
Sbjct: 283 LALRWFLLCTHYRSPINYSESQLQNASQRLFYLYQT 318


>gi|184201515|ref|YP_001855722.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|229558711|sp|B2GFS8|SYC_KOCRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183581745|dbj|BAG30216.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 479

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 167/481 (34%), Positives = 253/481 (52%), Gaps = 56/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T    I +F  + P   R+Y CG TV    HIG+ R  +VFDVL R LR+   E 
Sbjct: 3   LRFYDTASATIKDFVPVHPGEARLYYCGATVQGAPHIGHVRSALVFDVLARWLRFRGLE- 61

Query: 65  CVTYVRNITDIDDKIIERAR----QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            VT VRN+TDIDDKI+  +R    Q++      +    +  +    F +    L    PT
Sbjct: 62  -VTTVRNVTDIDDKILVNSRASYEQDYSGDHAREPWWALAYRFEGVFGQAYAALGIDRPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT H+P+M  LIQ +I  GHAY A +   ++ FD  S P YG  +R+++++ +   
Sbjct: 121 YEPRATGHVPEMHALIQELIDAGHAYPATDGSGDVYFDVRSWPRYGELTRQRVEDMQDAP 180

Query: 178 RVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK      P+   W+SPWGRGRPGWH+ECSAM+  YLG  FDIH
Sbjct: 181 DADPR-GKRDPRDFALWKGRKEDEPLSASWDSPWGRGRPGWHLECSAMAGKYLGAHFDIH 239

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGGLDL FPHHENE+AQS  A R  + AN W+HNG +  EG KMSKS GN ++  ++L  
Sbjct: 240 GGGLDLRFPHHENELAQSTAAGR--EFANFWLHNGLVTYEGEKMSKSIGNTVSPQDMLRE 297

Query: 295 KKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---TSTSKGI---- 346
            +        P+ +R  +   HYR  +D+    L EA   + +       + + G+    
Sbjct: 298 AR--------PLAVRYYLGQAHYRSVLDYRPTSLQEATAAVERVEAVLVAARAAGLGLDR 349

Query: 347 ----IDPAVLSALYNDLNTVSAIQALHKLARE-----STKNHD----LLPIFNASAHILG 393
               +    ++ + +DLN   A+  LH+  R      +T +HD    L+      + +LG
Sbjct: 350 DTQDVPAEFVAVMDDDLNVPRALAVLHETVRAANSALATGDHDAARPLVAAVAGMSDVLG 409

Query: 394 I----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +              EH  + + + ++ L+ +R      + ++SAD IR QL + G +++
Sbjct: 410 LLQLMDLEGAGAGGAEH--RALDVLVQDLLAQRAAARTARDWASADRIRDQLAAAGVVVK 467

Query: 444 D 444
           D
Sbjct: 468 D 468


>gi|6318288|gb|AAF06821.1|AF065890_2 cysteinyl-tRNA synthetase [Thermoproteus tenax Kra 1]
          Length = 484

 Score =  280 bits (717), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 169/476 (35%), Positives = 252/476 (52%), Gaps = 50/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  +++  F  + P   R YVCG T YD  H+G+ R  + FD+L R L +   E 
Sbjct: 6   LRIYNTASKRVEPFSVLTPGVARGYVCGITPYDSVHVGHGRVYVFFDILRRYLEHLGLE- 64

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTH 121
            V  V N TD+DDKII RAR+E  +    DA+S    +  +  +++     RL       
Sbjct: 65  -VKLVINFTDVDDKIINRAREEFGA----DAVSRWREVPERYIREYFDVMERLYVKPAYA 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PR T ++  M+  I+ ++  G+AY A +  + F+   +P YG FS ++I+E   G RV 
Sbjct: 120 YPRVTEYVGDMLEWIRALVDRGYAYVAPDGSVYFEVGKVPRYGEFSGQRIEELVAGARVE 179

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K+NP DF LWK  +P EP W SPW  GRPGWH+EC  MS+ +LG  FD HGGG DL
Sbjct: 180 PEPGKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADL 239

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L   K+ G 
Sbjct: 240 IFPHHENEIAIARAMHGVDYFARYWIHVGYLTVGGEKMSKSLGNIITLKEVL--SKYDGE 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------KWPQTSTSKGIIDPAVLS 353
           +     +RLA  M+HYR+P++F+   L  A  LL        +  Q     G  D A L+
Sbjct: 298 A-----LRLAYAMSHYRKPMEFSYDLLDRAVELLGTMYTAYDELSQAVADAGERDVAPLA 352

Query: 354 ------------ALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPI---FNAS 388
                       AL +D++T  A +AL+ +AR          +       L I   +   
Sbjct: 353 EEASSYRRKFEEALADDMSTNEAARALYDMARFIISKVLYSVDKISRETALGILRDYAEM 412

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A +LG+ + K  + + ++ A+  +V+ R  L   ++++ AD +R +  + G  + D
Sbjct: 413 ADVLGL-LNKREVPRELAEAVRAIVEARSRLRSERQYALADMLRDRARALGVEMHD 467


>gi|299147030|ref|ZP_07040097.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298514915|gb|EFI38797.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 493

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P ++TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|160883992|ref|ZP_02064995.1| hypothetical protein BACOVA_01966 [Bacteroides ovatus ATCC 8483]
 gi|156110722|gb|EDO12467.1| hypothetical protein BACOVA_01966 [Bacteroides ovatus ATCC 8483]
          Length = 493

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P ++TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPSSTTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|300088786|ref|YP_003759308.1| cysteinyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528519|gb|ADJ26987.1| cysteinyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 482

 Score =  280 bits (716), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 171/487 (35%), Positives = 242/487 (49%), Gaps = 64/487 (13%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +KI NTL      F+ A DP  + MYVCG T    AHIG+A   I FDV+ R L  Y G 
Sbjct: 1   MKISNTLTGTREVFKPAADP--VSMYVCGITPQSSAHIGHAMSYINFDVIRRYL-LYRGY 57

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V YV+N TD+DDKII +A       P       +  +N   F  D + L  L     P
Sbjct: 58  R-VKYVQNFTDVDDKIIAKA------APAGLTPLELADRNIADFQADMSALNILPADAYP 110

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T  IP +I L++ ++  G AYE    + F    + +YG  S R +++ + G R+    
Sbjct: 111 RVTEEIPAIIELVEGLVARGFAYEVRGSVYFRVRRLADYGKLSHRTLEQMQAGARIEVDE 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG+GRPGWHIECSAMS  YLG+  DIHGGG DLIFP
Sbjct: 171 TKEDPMDFVLWKATKPGEPAWASPWGQGRPGWHIECSAMSHKYLGETIDIHGGGADLIFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      +     W+HNG L L G KMSKS GN ITI E L+        + 
Sbjct: 231 HHENEIAQSESFTGQKPFVRYWLHNGLLQLGGEKMSKSLGNLITIKEALQ-------KYS 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
           A  +R+ +L +HYR P+ ++ + +  AE    +  Q +  K +   A             
Sbjct: 284 ADALRVFVLSSHYRSPLTYSDEIVEAAEKGARRLTQAAGDKTVTSEADDPLFDREVCRSR 343

Query: 351 VLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIEV------C 397
            + A+ +D NT  A+ AL  LAR       E      +  +    A +LG+ +       
Sbjct: 344 FVEAMDDDFNTPRALAALFDLARDINRLEAEGRPTGKVRALLRELAGVLGLRLESADKTA 403

Query: 398 KEH--------------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
            +H                     + +   A+  ++  R  L + K ++ AD +R +L+ 
Sbjct: 404 GDHSGLLVAAAEIWRADGRELPDWDGDAERAMADILSLRAELRREKNYAEADKLRNRLDE 463

Query: 438 KGFILED 444
            G +++D
Sbjct: 464 TGIVIKD 470


>gi|299135529|ref|ZP_07028713.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601653|gb|EFI57807.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 494

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 183/513 (35%), Positives = 253/513 (49%), Gaps = 78/513 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  KI    A D   +R Y CGPTVYD+ HIGN R  +  D+L R  R Y    
Sbjct: 3   LELFNTLSGKIEPLFASDGHALRFYCCGPTVYDYGHIGNFRTFLHVDMLRRTARLY--GM 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V NITD+DDKII  A   +  +PI +     T+K  + F +D   L    P    R
Sbjct: 61  GLHHVMNITDVDDKIIRNA--GNAGLPIGE----YTAKFERAFFEDMDALGVERPEQIAR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT +I  M+ LI+ +     AY+A +    F  +  P YG  S++  +  + G RV  ++
Sbjct: 115 ATENIGDMVTLIERLAAQDIAYKAEDGSWYFRIARFPEYGKLSKKDFEGIEDGARVDVDE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K    DF LWK + P E  W++  G+GRPGWHIECSAM+  YLG  FD+H GG DL+F
Sbjct: 175 YDKDAARDFALWKATKPGETSWDTALGKGRPGWHIECSAMAMKYLGDSFDLHAGGEDLMF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  A  W H  FL +EG+KMSKS GNF T+ +LL       +  
Sbjct: 235 PHHENEIAQSECATH-QPFARHWFHVRFLLVEGKKMSKSEGNFYTLRDLLL------KGH 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTSTSKGIIDPA 350
            A  IR  +L   YR  ++FT   LTE            A I   KWP+++ +   +  A
Sbjct: 288 RASAIRFLLLSVPYRHQLNFTFDGLTESTNAVERLRTFYARIRDGKWPESAPADDSVASA 347

Query: 351 V-------LSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNASA 389
           +        +AL NDLNT  A  A+  + R      D              LL  F++  
Sbjct: 348 IRLGDEKFTAALGNDLNTAEARAAIFDVLRAVNSAADQSKLVRTDADAMLTLLAKFDSIF 407

Query: 390 HILG-------------------IEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSS 427
            +L                    +      L   +S++   I+ LV ER +  K + F+ 
Sbjct: 408 AVLEDHDAELTRAAIAWAESEGRLGEADASLLATLSLSDADIDALVAERTLAKKQRNFAR 467

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           AD +R +L  KG ILED K+        RWK+K
Sbjct: 468 ADAVRNELLEKGIILEDSKDG------VRWKRK 494


>gi|325844466|ref|ZP_08168193.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489140|gb|EGC91524.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 446

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 168/465 (36%), Positives = 247/465 (53%), Gaps = 59/465 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNT  R+  EF+ I+ + +RMY+CGPTVY++ HIGNARP++ FD+++R  +Y   E  V
Sbjct: 3   IYNTYTREKEEFRPIEENKVRMYICGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +V N+TD+DDKII RA +E  +       + I+ K    F++    L  L  T  P+ T
Sbjct: 61  EFVSNVTDVDDKIINRAIEEGVTE------AQISEKYLNYFLECNKVLNALPLTAMPKVT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +  MI  I  ++    AY  + ++ F    +  YG  S +KIDE ++G R+ E   K+
Sbjct: 115 ESMDSMIEFINQLVERDFAYAVDGDVYFRIDKVREYGQLSGKKIDELEVGARIAEDSKKE 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHH 245
           NP DF+LWK+ T     W+SPWG GRPGWH EC  M ++ + GK+ DIHGGG DL FPHH
Sbjct: 175 NPLDFVLWKK-TDKGITWDSPWGAGRPGWHTECVVMINNQFHGKI-DIHGGGTDLQFPHH 232

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS C       AN W+H G L L   KMSKS GN I + +L+E          A 
Sbjct: 233 ENEIAQSLCMYE-HNIANYWMHVGRLGLNNEKMSKSIGNVINVKDLIE-------QIDAN 284

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID--PAV-- 351
             RL ML  HYR+PI++T + +   ++ + +W +  ++           G +D  P+V  
Sbjct: 285 AFRLFMLSVHYRQPINYTEENI---QLAVKEWQKVKSTYDQLHLKLDLAGALDVEPSVVP 341

Query: 352 ---------LSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHIL 392
                    + AL +D NT +AI +L+   +E  K          N   L       +I 
Sbjct: 342 EIEALMNQFVEALEDDFNTANAIASLYGAIKEINKMVRAKASDEANRYALMTLQNMTYIF 401

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           G ++ K+ L       ++   + R    K K F+ AD +R +L++
Sbjct: 402 GFDLNKKRLTDEERELMQAWEEAR----KAKDFAKADELRGKLQA 442


>gi|45358623|ref|NP_988180.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|61216204|sp|Q6LYD1|SYC_METMP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|45047489|emb|CAF30616.1| Cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 476

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 167/485 (34%), Positives = 247/485 (50%), Gaps = 56/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF+ ++   ++MYVCGPTVYD  H+G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHM--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA ++    P       I+ +  + F+ D   L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRAYEKEKD-PKE-----ISEQFIKVFLDDMATLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I  I+ +I  G AY+  + + F+     NYG  S   +++   G R+     
Sbjct: 114 VTEHISEIIAFIEKLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARIETSEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN  DF LWK + P EP WESP+G GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNQKDFALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI ++        + +  
Sbjct: 234 HENEIAQSSAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDI-------SKEYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDPAVL- 352
            ++R   +  HYR PID+T + +   +  L K             ++  S+   +   L 
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLL 345

Query: 353 ------------SALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNAS 388
                       +A+ +D NTV A++++ +++    K   L            L  +   
Sbjct: 346 YDILKNSKNNFYNAMNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKII 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     KE  + +    +  L++ R  +   K +  +D IR  L++ G+ +ED  
Sbjct: 406 GEIFGLFENYFKESSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIED-- 463

Query: 447 NPDNG 451
           NP  G
Sbjct: 464 NPKEG 468


>gi|237720477|ref|ZP_04550958.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229450228|gb|EEO56019.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 493

 Score =  280 bits (716), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P ++TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDKIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 ALTALGFEIKDTKD 485


>gi|30316152|sp|Q8DHW6|SYC_THEEB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 486

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 167/492 (33%), Positives = 250/492 (50%), Gaps = 69/492 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R++  F  + P  + +Y CG TVYD+ H+G+AR  + +DVL R L +     
Sbjct: 3   LHLYNTLSRRLEPFSPLHPERVTIYACGVTVYDYCHLGHARSYVAWDVLRRYLTFL--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA +        + ++ ++ +    + +D   L  L  +  PR
Sbjct: 61  TVHYVQNFTDIDDKILRRAYEN------GETMATVSDRYIAAYHQDMAALNILPASAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP++I LIQ ++  G+AY A  ++ +  +  P+YG  S R++++   G        
Sbjct: 115 ATEVIPEIINLIQGLLDRGYAYVAGGDVYYAVAQFPSYGKLSGRQLEQLMAGASGRIEEE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           E+  K++P DF LWK + P E      WE+PWG+GRPGWHIECSAM     G   DIH G
Sbjct: 175 EEQRKRHPLDFALWKAAKPEEMSVYHPWEAPWGKGRPGWHIECSAMVRQAFGATVDIHCG 234

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DLIFPHHENEIAQS    + +  A  W+HNGF+ +   KMSKS GNF TI +LL    
Sbjct: 235 GMDLIFPHHENEIAQSEAVTQ-QPLARFWLHNGFVTVNTEKMSKSLGNFTTIRDLL---- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---------------EILLSKWPQTS 341
              +      +RL +L   YR+P+DFT + LT A               +I L       
Sbjct: 290 --AQGLDPMALRLLVLQAQYRKPLDFTPEALTAAAKGWQTLGEALHLHQQIPLPPIDAAE 347

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------------------HD 380
                   A   A+  DLNT +A+  + +LA+   +                      H 
Sbjct: 348 VRSHPKTEAFCQAMDEDLNTAAALAVIFELAKTLNREQHRYLHGGGWGRSPAEVSRDWHT 407

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYIRKQL 435
           L+ +    A +LG+E  KE  N  +++      I+ L+  R    + K ++ +D +R  L
Sbjct: 408 LVTL----AQVLGLE-AKEESNPALTVELTDEEIQALIAARTAARQAKNYTESDRLRDLL 462

Query: 436 ESKGFILEDYKN 447
            ++G  L D K+
Sbjct: 463 LAQGVKLVDQKD 474


>gi|301630357|ref|XP_002944288.1| PREDICTED: cysteinyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 433

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 164/449 (36%), Positives = 235/449 (52%), Gaps = 59/449 (13%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  H+G+AR M+ FDV+ R LR       VT+VRNITDIDDKII RA    
Sbjct: 1   MYVCGMTVYDLCHVGHARSMVAFDVVQRWLRA--SGLAVTFVRNITDIDDKIIRRA---- 54

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   + I  +T +   +  +D   L    PTH PRAT+++PQM+ +++ +   G AY 
Sbjct: 55  --VESGETIGALTRRMIDEMYRDADALGVERPTHDPRATDYVPQMLDIVRRLEDQGLAYR 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS---TPMEPG 203
           A + ++ F     P YG  S + +DE + G RV  +  K++P DF+LWK +    P E  
Sbjct: 113 APSGDVNFAVRKFPGYGKLSGKTLDELQAGERVAVQDGKQDPLDFVLWKAAKANEPQEAK 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W+S +G+GRPGWHIECSAM    LG+ FDIHGGG DL FPHHENEIAQS  A+  +  A 
Sbjct: 173 WDSGYGQGRPGWHIECSAMCGALLGQTFDIHGGGADLQFPHHENEIAQSEGANG-QPLAR 231

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGF+N++  KMSKS GNF TI ++L         + A  IR  ++ +HYR P++++
Sbjct: 232 FWMHNGFINIDNEKMSKSLGNFFTIRDVLG-------QFDAETIRFFVVRSHYRSPLNYS 284

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVL-------------SALYNDLNTVSAIQALHK 370
              L +A   L +     T+  ++ PA +             +A+  D  T  A+  L  
Sbjct: 285 DAHLQDARGGLKR---LYTALSVVAPAEVPIDWADPYAARFKAAMDEDFGTPEAVAVLFD 341

Query: 371 LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL----------- 419
           LA E  +          SA + G           +    +  +Q    L           
Sbjct: 342 LAGEVNRRR--------SATLAGQLKALGGCLGLLQGDAQTFLQAGTGLDASAIAAQIAA 393

Query: 420 ----LKMKKFSSADYIRKQLESKGFILED 444
                  + F+ AD IR +L ++G +L+D
Sbjct: 394 RAAAKGARNFAEADRIRAELLAQGIVLKD 422


>gi|75760638|ref|ZP_00740667.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491881|gb|EAO55068.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 339

 Score =  280 bits (715), Expect = 4e-73,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 194/323 (60%), Gaps = 16/323 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   + 
Sbjct: 3   IHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A +    +P       I  +  + + +D T L C   T  PR
Sbjct: 62  -VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+     
Sbjct: 115 VTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +  
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRL 327
            +IR  ML  HYR PI+F+ + L
Sbjct: 287 QLIRFFMLSVHYRHPINFSEELL 309


>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
 gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
          Length = 492

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 249/492 (50%), Gaps = 83/492 (16%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           + MYVCG T YD++HIG+AR  + FDVLYR   +   E  VTYVRN TDIDDKII+RA  
Sbjct: 16  LSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFTFMGYE--VTYVRNFTDIDDKIIKRAND 73

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 + D    ++++   +F +D   L CLAP+ +PR + +I Q+I +I  I+ +G+ 
Sbjct: 74  ------LGDDPIELSNRFCDEFRRDMASLRCLAPSLEPRVSRNIDQIIKMISQILENGYG 127

Query: 146 YEANNEIIFDT-----SSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
           Y  +N  ++ +      + P+ YG  S RK+D+ + G RV     K NP DF+LWK +  
Sbjct: 128 YVLDNGDVYFSLDKFVPAFPDCYGRLSGRKLDDNRAGERVAVDDRKLNPGDFVLWKANG- 186

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG+DLIFPHHENEI QS  A   E
Sbjct: 187 -EPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPHHENEIVQSRAACH-E 244

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
                W+HNGF+ ++  KMSKS GNF TI E+ E        +    +R  +L THYR P
Sbjct: 245 SNITYWMHNGFVTVDSEKMSKSLGNFFTIREVFEL-------YHPLALRWFLLCTHYRSP 297

Query: 320 IDFTVQRLTEAEILLSKWPQT------------------------STSKGIIDPAVLSAL 355
           I+++  +L  A   L    QT                        + +   +  ++ S+L
Sbjct: 298 INYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKAAENAKALRLSLRSSL 357

Query: 356 YNDLNTVSAIQAL------------HKLARESTKNH---DLLPI-FNASAHILGIEV--- 396
            +DLNT   I AL             K  R+    +   DLL +    +  +LG  V   
Sbjct: 358 ADDLNTPVTIGALSEPLKLMNELLHSKRGRKDKSRYSSLDLLRLEVEQALEVLGFSVADY 417

Query: 397 --------CKEHLNKNISIAIEKLVQ--ERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                   CK  L +      E L+Q  ER      K F  +D IR +L S G  L    
Sbjct: 418 SQALFLPTCKA-LKRAGLTEDELLLQIHERAAARASKDFGKSDEIRDKLSSLGISL---- 472

Query: 447 NPDNGQRMTRWK 458
             D G   T W+
Sbjct: 473 -MDGGGDETLWR 483


>gi|293368873|ref|ZP_06615476.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292636022|gb|EFF54511.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 493

 Score =  280 bits (715), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFIPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P ++TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDKIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 ALTALGFEIKDTKD 485


>gi|124514778|gb|EAY56290.1| Cysteinyl-tRNA synthetase, class Ia [Leptospirillum rubarum]
          Length = 490

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 182/484 (37%), Positives = 251/484 (51%), Gaps = 51/484 (10%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           NTL +K        P  + MYVCG TVYD  H+G+AR   VFD+L+RLL    G + V Y
Sbjct: 21  NTLTQKTEPLSPRIPGEVTMYVCGVTVYDDCHLGHARSQTVFDLLHRLL-LRLGYR-VRY 78

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           VRNITDIDDKII +A++          I+ IT      F +D  RL  L P  +PRAT +
Sbjct: 79  VRNITDIDDKIIRKAQE------TGRTITEITDIYIDSFQRDMGRLGVLPPNKEPRATLY 132

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           +  MI LI  ++  G AY+  N++ F      +YG  S +K+DE + G R+     K++P
Sbjct: 133 LEPMIRLIGTLLDKGFAYKKGNDVYFRVRKYQSYGELSHQKLDELQAGARIVADEEKEDP 192

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            DF LWK +   EP + + +G GRPGWHIECSAMS   LG+  DIHGGG+DL+FPHHENE
Sbjct: 193 LDFALWKGAKIGEPSYPAFFGEGRPGWHIECSAMSLSELGETIDIHGGGMDLMFPHHENE 252

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG---GRSWPAP 305
            AQS CA   ++   IWIHNGF+ L   KMSKS GN   I    ET  F     R W   
Sbjct: 253 RAQSECATG-KRFVGIWIHNGFVTLNEEKMSKSLGNIFRIRTFFETSPFPEGVTREW--- 308

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSALY 356
            +R  +L THY  P+D T + L  A+  L                  +G +    LSAL 
Sbjct: 309 -LRAFLLSTHYGSPVDLTDENLAHAKNALDSLYLFKDRLDSVLGEVREGQMTREFLSALC 367

Query: 357 NDLNTVSAIQALHKL------------ARESTKNHDLLPIFNASAHILGIEVC------- 397
            D++T  A + LH+             + +  +  D+  +F  +   LGI          
Sbjct: 368 RDMDTPVAFRVLHEAKNSLNPVLGSGGSLKEERLSDVRALFEVAKSTLGILTLPASEWVY 427

Query: 398 --KEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
              E   +  S+    +++LV ER    + K ++ AD IR++L+  G++LED  NP    
Sbjct: 428 GKGEKTGREESLLPEEVDRLVLEREKARREKDYARADGIRERLKKAGYLLED--NPGGLP 485

Query: 453 RMTR 456
           R+ +
Sbjct: 486 RIRK 489


>gi|213865169|ref|ZP_03387288.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 283

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 141/290 (48%), Positives = 188/290 (64%), Gaps = 10/290 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+  G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L+
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLK 282


>gi|6599476|gb|AAF18750.1|AF163997_1 cysteinyl-tRNA synthetase [Methanococcus maripaludis]
          Length = 476

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 172/485 (35%), Positives = 244/485 (50%), Gaps = 56/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ ++ + ++MYVCGP VYD  H+G+ R  +  D++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKTLNKNEVKMYVCGPPVYDTTHLGHGRTYVSLDIIRRYLEHI--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA ++    P       I+ +  + F+ D   L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRAYEKGKD-PKE-----ISEQFIKVFLDDMATLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I  I+ +I  G AY+  + + F+     NYG  S   +++   G RV     
Sbjct: 114 VTEHISEIIAFIERLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARVETSEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN  DF LWK + P EP WESP+G+GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNQKDFALWKTAKPGEPKWESPFGKGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N WIH GF+ + G KMSKS GNFITI ++        + +  
Sbjct: 234 HENEIAQSSAYSG-KDWVNYWIHTGFVMVNGEKMSKSLGNFITIGDI-------SKEYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------WPQTSTSK 344
            ++R   +  HYR PID+T + +   +  L K                    W +     
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRIWGENEFLL 345

Query: 345 GIIDPAVLSALYN----DLNTVSAIQALHKLARESTKNHDL------------LPIFNAS 388
             I     +  YN    D NTV A++++ +++    K   L            L  +   
Sbjct: 346 YDILKNSKNNFYNAMNSDFNTVEALKSVFEVSNGVNKYLSLTETPSEGLLLKALDFYKII 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     KE    N    ++ L++ R  L   K +  +D IR  L++ G+ +ED  
Sbjct: 406 GEIFGLFENYFKESSESNEEEFVKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIED-- 463

Query: 447 NPDNG 451
           NP  G
Sbjct: 464 NPKEG 468


>gi|320334065|ref|YP_004170776.1| cysteinyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755354|gb|ADV67111.1| cysteinyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 485

 Score =  279 bits (714), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 183/494 (37%), Positives = 254/494 (51%), Gaps = 73/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL--YRLLRYYYG 62
           I +++TL R+  +F+   P  + MY+CGPTVY  AH+G+A+  + FDV+  Y L R Y  
Sbjct: 8   IYLHDTLTRQKVKFEPTTPGRVGMYLCGPTVYSDAHVGHAKKEVAFDVVRRYFLHRGY-- 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
              V YV NITD+          +DKI +RA  E    P+      +  K    FV D  
Sbjct: 66  --AVRYVSNITDVGHLQNDSDDGEDKIAKRAALEQLE-PME-----VADKYFWSFVSDME 117

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
           RL  L P+  PRAT HI + I LI+ +I  GHAY AN  + FD  S P YG  S RK+D+
Sbjct: 118 RLNVLKPSINPRATGHITEQIELIEELIARGHAYAANGSVYFDVRSWPRYGVLSGRKLDD 177

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLG 228
           Q+ GTR   +  K++P DF LWKR+   E G    W+SPWG G PGWHIECSAMS  YLG
Sbjct: 178 QEEGTREDVREEKRDPRDFALWKRA---EAGHIMRWDSPWGVGFPGWHIECSAMSLKYLG 234

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIHGGGLDL FPHHE EIAQS  A      A  W+HN  L + G KMSKS GNF T+
Sbjct: 235 EGFDIHGGGLDLQFPHHEAEIAQSEAAG--HAFARYWMHNNMLTIGGEKMSKSKGNFTTL 292

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA--EIL--- 333
            +L       GR  P  V+R  ++ +HYR   +             +RL EA  E+    
Sbjct: 293 ADLY------GRVDPM-VVRFLLISSHYRSITEMNDDAFVSAANGYRRLNEALHEVERRL 345

Query: 334 --LSKWPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS- 388
              +     + S+ I     A  +A+ +D NT  A+ AL  L  +     +   + NA+ 
Sbjct: 346 PDAADGEDAALSRKIAGHVAAFEAAMSDDFNTPKAVAALFGLTTDVNAALNAGAVPNATL 405

Query: 389 -----------AHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                        +LG+    +  ++   + +S  ++ +++ R      K++  AD +R 
Sbjct: 406 VAARDAYRQLGGDVLGLFADTQDARQDDTQLVSALMDLVLKARQNYRLNKQYGEADELRD 465

Query: 434 QLESKGFILEDYKN 447
            L   G  +ED K+
Sbjct: 466 TLTKVGVTVEDTKD 479


>gi|229067855|ref|ZP_04201172.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229188375|ref|ZP_04315423.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228595049|gb|EEK52820.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228715214|gb|EEL67073.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 440

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 169/464 (36%), Positives = 244/464 (52%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +P       I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 59  EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWP--------QTSTSKGIID-------------PAVLSALYNDLNTVSAIQ 366
                 L +          +  +S  + D              A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTK----NHDLLPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +     H    +  A          ILG+E+ K    + +   IE+L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELSK---EELLDEEIEELIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILED------TAQGTRWKR 439


>gi|306817738|ref|ZP_07451480.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649552|gb|EFM46835.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 538

 Score =  279 bits (713), Expect = 7e-73,   Method: Compositional matrix adjust.
 Identities = 145/341 (42%), Positives = 200/341 (58%), Gaps = 26/341 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ + P  + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLTPGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
           AT HIPQ I L+Q +I  GHAY +    + F   S+P+YGS + +++      E      
Sbjct: 113 ATGHIPQQIALVQRLIDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGW--GFARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDK 324


>gi|126465424|ref|YP_001040533.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|166225308|sp|A3DLW5|SYC_STAMF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126014247|gb|ABN69625.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 477

 Score =  279 bits (713), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 183/483 (37%), Positives = 243/483 (50%), Gaps = 63/483 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL--YRLLRYYYG 62
           IKIYNTL RKI EF+ + P  ++MYVCGPTVYD+ HIG+ R  +V+D L  Y  LR Y+ 
Sbjct: 4   IKIYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKRYLALRGYH- 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITDIDDKII RA QE            I    T+ +++   +L      H 
Sbjct: 63  ---VLHVMNITDIDDKIINRAHQE------KRDWREIAETYTRDYLESLGKLNVKVDLH- 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR T HI ++I  IQ +I  G+AY A +  + F+    P YG  S R    +++ ++  E
Sbjct: 113 PRVTEHIKEIIEFIQILIDKGYAYVAPSGSVYFEVDKYPEYGELSGRT--NKELWSQEKE 170

Query: 182 KY-HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK P DF LWK   P EP W++PWG+GRPGWHIECS MSS YLG+ FDIHGGG DL
Sbjct: 171 FISEKKKPYDFALWKAWKPGEPHWDAPWGKGRPGWHIECSVMSSRYLGRQFDIHGGGTDL 230

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENE AQS  A  ++     W+H G + +   KMSKS GN I + E         +
Sbjct: 231 IFPHHENERAQSEAAFGVKPWVKYWVHTGMVMMGSEKMSKSLGNIIPLREAF-------K 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVL------- 352
            W    +RL  L +HYR P+ FT + + +A+    +    T+T K +   AV        
Sbjct: 284 EWGPETLRLWYLTSHYRRPLVFTEESIRQAQKYYERLVSVTNTIKKLSREAVSLHRMNDE 343

Query: 353 ----------------SALYNDLNTVSAIQALHKLARESTKN-------------HDLLP 383
                            AL ND NT  A+  + +      K              + LL 
Sbjct: 344 DLKILEKLLEIRSRFHEALSNDFNTPQALAVISEFMTLVFKEIQYNPKYMLVLTAYKLLR 403

Query: 384 IFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            FN    +L   + +  E L   +   I  +V  R  L + K +  AD IR +L   G I
Sbjct: 404 EFNTVLGVLDKYLVETPEELETLLDNVINIVVDIRRELRERKLYDLADRIRSELGKHGII 463

Query: 442 LED 444
           L D
Sbjct: 464 LMD 466


>gi|295698510|ref|YP_003603165.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157420|gb|ADD79865.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 469

 Score =  279 bits (713), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 174/475 (36%), Positives = 253/475 (53%), Gaps = 52/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ RK  +F  I    + MYVCG T YD  HIG+ R   +FD++ + LR+  G K
Sbjct: 2   LKIYNTIHRKKEKFIPIVKGKVSMYVCGITAYDLCHIGHGRTFTIFDMITKYLRFM-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRNITDIDDKII++A Q+            +  K T++  KD   L    P  +P 
Sbjct: 61  -VNHVRNITDIDDKIIQKAIQKKTDY------EFLAQKMTEEMRKDFRNLKISQPNIEPN 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKID---EQKMGTRVP 180
           +T+++   I LI+ +  +G  Y + + +I+F+T   P YG+ S+R      E+K G  + 
Sbjct: 114 STSYVQSTIDLIKILEKNGKTYRSLSGDILFNTKENPEYGNLSKRNEILNLERKFGRNIK 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK  +DFILWK +   EP W SPWG+GRPGWH EC+AMS+  LGK FDIHGGG DL
Sbjct: 174 NLQSKKCLSDFILWKSAKEGEPFWNSPWGKGRPGWHTECAAMSTKILGKNFDIHGGGSDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENE  QS  A   +  AN WIH G L ++ +KMSKS+GNF  I ++         
Sbjct: 234 IFPHHENERIQSIVAYG-DNFANYWIHTGMLKIQEKKMSKSDGNFFKIRDICS------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKG-----II 347
           ++ + VIR   L +HYR  +++++ ++ +++  L K         P+    K        
Sbjct: 286 AYNSEVIRYFFLSSHYRHHLNYSINKINQSKRSLEKLYFSLIGTNPEHPIQKNDRYLEKF 345

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST------------------KNHDLLPIFNASA 389
           + A + A+ +D NT  A   L K+++E                    K  ++L + N S 
Sbjct: 346 EKAFIEAMNDDFNTPKAYSILFKISKEINLQKKININIANRLAKILKKMANVLGLLNQSV 405

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           H    ++ +  L +  +  IE ++Q R    K K +  AD IRK L   G ILED
Sbjct: 406 HQF-FKINRITLKEIKNQEIENIIQIREKARKNKNWEEADRIRKDLYQIGIILED 459


>gi|148269355|ref|YP_001243815.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170288013|ref|YP_001738251.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|281411948|ref|YP_003346027.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|229558798|sp|A5IJ66|SYC_THEP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558801|sp|B1L7Y7|SYC_THESQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|147734899|gb|ABQ46239.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170175516|gb|ACB08568.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|281373051|gb|ADA66613.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 460

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 169/467 (36%), Positives = 243/467 (52%), Gaps = 44/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  I P  +RMYVCGPTVYD  H+GNARP +VFDV  R L Y  G +
Sbjct: 1   MRITNTLTGKKEEFVPIQPGVVRMYVCGPTVYDLIHVGNARPAVVFDVFRRYLEYR-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +  V+N TDIDDKII +A Q      +      +      ++ +D   L        PR
Sbjct: 60  VIM-VQNFTDIDDKIINKANQ------LGVDYKTVADTFIAEYWRDAHALGIRPANFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  ++ +I+ ++  G AY+    + FD      YG  S++KI++   G RV     
Sbjct: 113 TTDFVDDIVEIIERLVEKGVAYQTETGVYFDVRKFEKYGELSKKKIEDLIAGARVEVDET 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF LWK++ P EP W+SPWG GRPGWHIEC+ MS   LG+ FDIH GG DL+FPH
Sbjct: 173 KKFPLDFSLWKKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE AQ+     ++   A  W+HNG +   G KMSKS GN  T+ E +  K++G     
Sbjct: 233 HENEKAQAEALTGKV--FARYWMHNGMVRFLGDKMSKSTGNIFTVREAV--KRYGRDG-- 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV----------- 351
              +R  +L  HYR P+DF+ + L +    + + W      +   D  +           
Sbjct: 287 ---LRYMILSKHYRSPMDFSEELLQDYSRAVKRVWEILGRYEKSGDIGIPKRNAVYEEYV 343

Query: 352 ---LSALYNDLNTVSAIQALHKLARESTKNHD-------LL---PIFNASAHILGI-EVC 397
              + AL +D NT  A+  + +LAR  +K  D       LL    I      +LG+ ++ 
Sbjct: 344 NRFVEALDDDFNTPVAVSLIFELARNLSKAMDDNDREDALLYYHLIRREFGPVLGLFDLN 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +E    +    ++ L++ R +L K K++  +D IR  L   G IL+D
Sbjct: 404 EEKKEVSSEELLKLLIEVRDVLRKEKRYDLSDRIRDHLREIGIILKD 450


>gi|229492425|ref|ZP_04386229.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320654|gb|EEN86471.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 466

 Score =  278 bits (712), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 166/476 (34%), Positives = 247/476 (51%), Gaps = 52/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IY++  + + EF  + P+ + +YVCGPTV    HIG+ R  +V+D+  R L +     
Sbjct: 3   IRIYDSGHQALREFVPLRPARVSIYVCGPTVQSAPHIGHLRSALVYDLWRRWLTHR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT VRN+TDIDDKI+  A +  P      A  + T     +F +  T L  L PT++PR
Sbjct: 61  TVTLVRNVTDIDDKILALATESEPWWA--RAYRVET-----EFTRAYTALGILPPTYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            + HI + + LI  ++  GHAY A++   ++ FD SS   YG+ +R+  D   + +    
Sbjct: 114 TSGHITEALALIDRLLRRGHAYVASDGSGDVYFDVSSWQTYGTLTRQNPDA-LLQSDDGH 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K+NP DF LWK + P EP    W SPWG GRPGWHI+CSAMS  YLG  FDIHGGG+
Sbjct: 173 RQAKQNPQDFALWKGTNPSEPKSARWPSPWGTGRPGWHIQCSAMSRRYLGPAFDIHGGGI 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A   ++ A  W+HNG + + G+KM+KS  N+++ +ELL      
Sbjct: 233 DLRFPHHENELAQSTAAG--DEFARYWVHNGLVTISGQKMAKSLDNYLSADELLR----- 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGII 347
            R  PA  +R  +L  HYR  +D+  + LT  +  +++               +     +
Sbjct: 286 -RVGPA-TLRYYLLSAHYRSALDYQEEALTYTQATVARIANFQHRARTHLEDATAGDPTL 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCK 398
             A  +AL +DLN ++A+  LH   R         E+           A   +LGIE   
Sbjct: 344 PGAFAAALDDDLNVLAALGVLHDHVRAGNIAVDNGETAAAAAAYQSITAMTSVLGIETES 403

Query: 399 E-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                     +  ++  +E L+  R        F +AD IR  L   G ++ED+ +
Sbjct: 404 SPTAPRDGQHSSTVTALVEVLLANRSCARGEGDFVTADRIRGDLARSGIVIEDHSS 459


>gi|258655032|ref|YP_003204188.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258558257|gb|ACV81199.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 473

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 171/480 (35%), Positives = 252/480 (52%), Gaps = 53/480 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPM-IVFDVLYRLLRY 59
           M + + +Y+T  R +  F+ + P  + +Y CG TV    HIG+ R   IV+DVL R L +
Sbjct: 1   MSQSLHLYDTATRSVRPFEPLQPGVVSLYNCGATVQWHPHIGHLRGAGIVYDVLRRWLEF 60

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
              E  V +VRN+TDIDDKI+ +A +     P  +      + + + F      L CL P
Sbjct: 61  TGYE--VRHVRNVTDIDDKILTKAAEA--GRPWWE----WATTHERSFDDAYDTLGCLRP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT HIPQ++ +I  +I  GHAY A  ++ F   + P+YG  S ++IDE   G   
Sbjct: 113 SVEPRATGHIPQILEMIAALIEAGHAYAAAGDVYFAVRTQPDYGFLSGQRIDEMVQGET- 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF LWK + P EP W+SPWGRGRPGWHIECSAM+  YLG  FDIHGGGLD
Sbjct: 172 -EAGGKRDPADFTLWKAAKPGEPSWDSPWGRGRPGWHIECSAMARAYLGTEFDIHGGGLD 230

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS     +   A  W+H+ ++ + G KMSKS GN +++  + E  +   
Sbjct: 231 LIFPHHENEAAQSHGLGDV--FARYWMHSHWVTMAGEKMSKSLGNILSVPTITEKVR--- 285

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSK------G 345
                PV +R  ++  HYR  I+++ + L +A       E  L +    + +       G
Sbjct: 286 -----PVALRYYLISVHYRSSIEYSQEALDDAAKAYERIEAFLHRAADRAGAGADGVPIG 340

Query: 346 IIDPAVLSALYNDLNTVSAIQALHK--------LAR-ESTKNHDLLPIFNASAHILGIEV 396
            +  A   A+ +DL    A+  +H+        LAR +     +L     A   +LG++ 
Sbjct: 341 EVPDAFRQAMNDDLGVPRALAVVHEKVRAGNAALARSDDDAAQELASSVRAMVAVLGLDP 400

Query: 397 ---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                        L +     ++ L+ ER      + F+ AD IR Q+ + GF +ED K+
Sbjct: 401 WAAPWVERKVDRRLVEATGRLLDGLLAERAQARADRDFARADEIRTQVAAAGFAIEDTKD 460


>gi|219851792|ref|YP_002466224.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546051|gb|ACL16501.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 419

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 163/444 (36%), Positives = 248/444 (55%), Gaps = 32/444 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL R +     ++P+ + M+VCGPTVYD++H+G+AR  +VFDVL + LR+    K
Sbjct: 1   MELYSTLLRTVEPLVTLNPNRVSMFVCGPTVYDYSHLGHARTYVVFDVLAKYLRWT--GK 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII RA  E      N +   ++ +   ++++D   L   + ++  R
Sbjct: 59  EVFYLQNITDVDDKIINRANAE------NVSQHDLSRRFEIEYLRDMRALGVDSVSYYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I  ++ +I  G AY     + F+  +  + G  S +   ++   +R+ ++  
Sbjct: 113 ATTHIPEIINQVERLISRGAAYVTEGGVYFNVGTFEHNGELSHQHGTDRV--SRITDET- 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DF LWK     E  W+SPWGRGRPGWHIE +A+S  Y G+ +DIHGGGLDLIFPH
Sbjct: 170 KQNSLDFALWKLGEFGEYTWDSPWGRGRPGWHIEDTAISEKYFGQQYDIHGGGLDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ    +        W+H GFL ++G KMSKS GNFITI + L+T       W  
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWLHTGFLTVKGEKMSKSLGNFITIRDALKT-------WNK 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----AVLSALYNDLN 360
            V+R  +L++HY  P+  T + L  A   L      +      +P    A   A+ +DLN
Sbjct: 283 DVLRYFILLSHYSSPLQATDEGLDNAARALEHIRAVAQKDTGENPEGRKAFTDAMESDLN 342

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T +A+ A+  LA     + D+L +      ILGI   +E      S  +  L + R  L 
Sbjct: 343 TPNALAAIQTLA----ASGDILAL-KEFGEILGINFLRE-----TSAPLSILQEIRAELR 392

Query: 421 KMKKFSSADYIRKQLESKGFILED 444
             K+F+ AD IR+++ + G  + D
Sbjct: 393 ANKQFAVADMIRERMVAAGITITD 416


>gi|298490116|ref|YP_003720293.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232034|gb|ADI63170.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 486

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 175/490 (35%), Positives = 247/490 (50%), Gaps = 66/490 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  ++P  ++MY CG TVYD+ H+G+AR  I++DV+ R L+    + 
Sbjct: 3   LSIYNTLTRRQEPFTTVEPGKVKMYCCGVTVYDYCHLGHARACIIWDVVRRYLQLIGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RARQE  ++        +  +  Q + +D +RL        PR
Sbjct: 62  -VRYIQNFTDIDDKILNRARQEKSTM------EAVAERYIQAYFEDMSRLGIKEANEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  LI ++   G AY AN ++ +       YG  S RK+++ ++G   RV   
Sbjct: 115 ATHTMNGIQRLIHDLEHKGFAYPANGDVYYAVQKFDEYGKLSGRKLEDLQLGASERVNIE 174

Query: 180 PEKYHKKN-PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +Y KK  P DF LWK     EP WESPWG+GRPGWHIECSAM    LG   DIH GG 
Sbjct: 175 DAEYQKKQYPFDFALWKAVKQGEPAWESPWGKGRPGWHIECSAMVRERLGDTIDIHTGGA 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      +  AN W+HNG + ++G KMSKS GNF TI  LL+     
Sbjct: 235 DLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRNLLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------------------EILLSKWP- 338
            R      +RL +LM  YR+PIDFT + +  A                   ++   +W  
Sbjct: 289 -RGVDPMALRLFVLMAQYRKPIDFTDEAILAATNGWYTLRQGLLFGYQYGKKLGTGEWGL 347

Query: 339 ---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
                 TS   I+      + +D N    +  + +LA+E  +  +++             
Sbjct: 348 GIRNNLTSNTYIE-RFKEVVNDDFNFPGGLAVIFELAKELIREKNIIVHQGKTETPPDKL 406

Query: 383 ----PIFNASAHILG----IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                     A +LG    +E+     +      IE L+Q+R    K K F+ +D IR  
Sbjct: 407 LQEWQTLVTLADVLGLTAQLEIETISEDALTDAEIEDLIQKRQEARKGKNFAESDCIRDD 466

Query: 435 LESKGFILED 444
           L SKG  L D
Sbjct: 467 LLSKGITLID 476


>gi|298480481|ref|ZP_06998678.1| cysteine--tRNA ligase [Bacteroides sp. D22]
 gi|298273302|gb|EFI14866.1| cysteine--tRNA ligase [Bacteroides sp. D22]
          Length = 493

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 264/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P  +TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPAPATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKELKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|265764886|ref|ZP_06093161.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263254270|gb|EEZ25704.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 491

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 180/493 (36%), Positives = 260/493 (52%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RY 59
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L R 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 60  YYGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            Y    V YVRNITD+          +DKI ++AR E    P+      +      ++ K
Sbjct: 61  GYK---VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHK 111

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFS 166
               L  L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +      +YG  S
Sbjct: 112 AMEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLS 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R +D+    TR +  +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM  
Sbjct: 172 GRNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGR 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GN
Sbjct: 232 KYLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGN 290

Query: 285 FITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           FIT+NE    + K   +++    IR  +L  HYR P+DF+ + L  AE  +S+  +   S
Sbjct: 291 FITLNEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGMSRLMEAVDS 350

Query: 344 KGIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLL 382
              I PA  S             A+ +DLNT   I  L          +A  +T + D L
Sbjct: 351 LEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDL 410

Query: 383 PIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H    ++   KE +  +          ++ L+++R+     K ++++D IR +
Sbjct: 411 KNLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTALGFEIKDTKD 483


>gi|29348760|ref|NP_812263.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568897|ref|ZP_04846307.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298387124|ref|ZP_06996678.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|61216345|sp|Q8A2F4|SYC_BACTN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29340666|gb|AAO78457.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840916|gb|EES68997.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298260274|gb|EFI03144.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 493

 Score =  278 bits (712), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 264/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEELE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA-EIL 333
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA E L
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLIEAIEGL 351

Query: 334 LSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
               P  +TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPAATTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNINAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKDLKETFHLFCFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEVKDTKD 485


>gi|237716747|ref|ZP_04547228.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262405523|ref|ZP_06082073.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294646338|ref|ZP_06723985.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806673|ref|ZP_06765504.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442730|gb|EEO48521.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262356398|gb|EEZ05488.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292638293|gb|EFF56664.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446093|gb|EFG14729.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 493

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 264/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLIEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P  +TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPAPATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKELKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|295086168|emb|CBK67691.1| cysteinyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 493

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 264/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P  +TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITPAPATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKELKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|291297887|ref|YP_003509165.1| cysteinyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290567107|gb|ADD40072.1| cysteinyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 480

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 167/487 (34%), Positives = 257/487 (52%), Gaps = 55/487 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T  RK+ +F    P  + +Y+CG T+    HIG+ R  + +D++    ++   +
Sbjct: 2   SLRLYDTGTRKVRDFVPRVPGKVSIYLCGLTLQGPPHIGHLRNGVNYDIMCSWFQHRGLD 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRN+TDI+DK++ ++R++      +     I+ +N ++   D   L    PT++P
Sbjct: 62  --VTYVRNVTDIEDKVLAKSREQ------DRPWWAISFENERRLAADYEALGVRPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT H+P+M+ LI  +I  GHAY   N ++ F   S P YG+ S RK ++        E 
Sbjct: 114 RATGHVPEMMDLIAELINKGHAYAPGNGDVYFSVESYPEYGALSHRKPEDMLCPDDGDES 173

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK + P EP    W +P+GRGRPGWH+ECSAMS  YLG  FDIHGGG D
Sbjct: 174 V-KRDPRDFALWKAAKPGEPADSSWNTPYGRGRPGWHLECSAMSRRYLGDAFDIHGGGTD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE+AQS  A  ++ T N W+HN  +NL G KMSKS GN +++  L      G 
Sbjct: 233 LMFPHHENELAQSRAAG-LDFT-NFWVHNNMVNLSGTKMSKSLGNVLSVEAL------GE 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLS----KWPQTSTSKGIID 348
           R +    IR  +   HYR  ID++   LTE+       E  +S    ++   +T  G + 
Sbjct: 285 RGFRPVEIRYYLAAPHYRSVIDYSDAILTESATSYRRLENFVSRAAERFGHDATEGGALC 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI-------- 394
               +AL +D  T +A  A+H++ RE     D            +   +LG+        
Sbjct: 345 ADFTAALDDDFGTPAAFAAIHEVTREGNAALDSSDDAAARGAAASVRAMLGVLNLDPLSR 404

Query: 395 ---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
              E   + L   +   +  ++++R    K K +++AD IR QL   G ++ED      G
Sbjct: 405 QWTETGGDDLTPVVDSLVNLVLEQRQQARKNKDYATADAIRDQLSRAGLVIED------G 458

Query: 452 QRMTRWK 458
            + +RW 
Sbjct: 459 PQGSRWS 465


>gi|162316926|ref|YP_001102717.2| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|187631653|sp|A4F6W7|SYC_SACEN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 464

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 169/479 (35%), Positives = 245/479 (51%), Gaps = 56/479 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +++T  R + EF         +YVCG TV    HIG+ R  + +DVL R L   +  
Sbjct: 2   SLHLHDTATRTMREFHPRLAGVASIYVCGATVQGVPHIGHVRGGLNYDVLRRWL--VHNG 59

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  VRN+TDIDDKI+ +A       P  +      + + + F     RL CL P+  P
Sbjct: 60  YDVRLVRNVTDIDDKILTKAADA--GRPWWE----WATAHERAFESAFDRLGCLPPSALP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEK 182
           RAT HI QMI L+Q +I  GHAY A  ++ F  +S   +YG  S +++DE + G      
Sbjct: 114 RATGHITQMIELMQRLIDKGHAYAAGGDVYFSVASYAEHYGRLSGQRLDEVQQGESTASG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIHGGGLDL+F
Sbjct: 174 --KRDPRDFTLWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS  A   +  A  W+HN ++ + G KMSKS GN + I  +L+         
Sbjct: 232 PHHENELAQSTAAG--DGFARYWMHNAWVTMSGEKMSKSLGNTVAIPAILQRAA------ 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTS--TSKGIIDPAVLS 353
            AP IR  ++  HYR  I+++   L EA       +  +++  Q +     G +     +
Sbjct: 284 -APEIRYYLVAPHYRSTIEYSEPALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAA 342

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD----------------------LLPIFNASAHI 391
           A+ +DL+T  AI  +H   RES    D                      L P+    A  
Sbjct: 343 AMDDDLSTPQAIAVVHNAIRESNAALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADT 402

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            G +    H    +S  +  ++Q+R      + F++AD +R +L++ G  +ED   PD 
Sbjct: 403 RGADDAAHHA---LSELVGSMLQQRQQARAERDFATADAVRDRLQACGIAVED--TPDG 456


>gi|302870248|ref|YP_003838885.1| cysteinyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315503473|ref|YP_004082360.1| cysteinyl-tRNA synthetase [Micromonospora sp. L5]
 gi|302573107|gb|ADL49309.1| cysteinyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315410092|gb|ADU08209.1| cysteinyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 471

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 174/479 (36%), Positives = 255/479 (53%), Gaps = 62/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L     E 
Sbjct: 3   LRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLSKGFE- 61

Query: 65  CVTYVRNITDIDDKIIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDK++ +A  Q+ P          I   N Q        L  L PT++P
Sbjct: 62  -VTFIRNLTDIDDKVLAKAMEQDRP-------FWSIAYANEQILTTSYRALNVLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           RAT H+P+M  LI  +I  GHAY A +   ++ FD +S P YGS S +   + +     P
Sbjct: 114 RATGHVPEMHELIARLIETGHAYPATDGSGDVYFDVASWPAYGSLSGQSPADMQPAGDAP 173

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++  K++P DF LWK + P EP    W SPWGRGRPGWHIECSAM   YLG  FDIHGGG
Sbjct: 174 DR-GKRDPRDFALWKGAKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGPEFDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQS  AD     A  W+H+G L + G KM KS GN + ++ +      
Sbjct: 233 LDLTFPHHENEIAQSQAADL--PFARYWVHHGLLGIGGTKMGKSLGNTLDLDYV---AAL 287

Query: 298 GGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWPQTSTSK------GII 347
           G R    PV +R   +  HYR  ID++   L EA +    +  + Q +  +      G +
Sbjct: 288 GVR----PVELRYYYVAAHYRSRIDYSEDALREAAVAYRRIEGFVQRAAERVGPGRPGDL 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARES----TKNHDL-----LPIFNASAHILGIEV-- 396
               ++A+ +DLNT +A+ ALH++ R+     T   D+     L    A   ILG++   
Sbjct: 344 PAGFVAAMDDDLNTSAALAALHEVVRDGNTALTAGDDVTVRTTLAATRAMLDILGVDPLD 403

Query: 397 -----------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                       +  ++  I++A+E+  Q R      K +++AD +R QL+  G ++ED
Sbjct: 404 PAWTGGGRTDDLRGVVDSLIALALEQRAQAR----SRKDWAAADAVRDQLKQAGVVVED 458


>gi|269976318|ref|ZP_06183314.1| cysteinyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269935647|gb|EEZ92185.1| cysteinyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 538

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 144/341 (42%), Positives = 200/341 (58%), Gaps = 26/341 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ + P  + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLTPGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
           AT HIPQ I L+Q ++  GHAY +    + F   S+P+YGS + +++      E      
Sbjct: 113 ATGHIPQQIALVQRLLDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGW--GFARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDK 324


>gi|70605996|ref|YP_254866.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363434|sp|Q4JCA6|SYC_SULAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68566644|gb|AAY79573.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 469

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 176/492 (35%), Positives = 253/492 (51%), Gaps = 66/492 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+I  F++ DP  ++MYVCGPTVYD+ HIG+ R  + FD + R L+      
Sbjct: 4   LRLYNTLGRRIETFESFDPLTVKMYVCGPTVYDYVHIGHGRAFVGFDGIVRYLKL--RGF 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+NITDIDDKII+RA +             I    T+ +++    L      H PR
Sbjct: 62  NVIRVQNITDIDDKIIKRANE------TGKDWREIVDYYTKDYMESLKALKVEIDQH-PR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+HI ++I  +Q ++  GHAY  ++  + FD  S P+YG  S  K +E   G  + ++ 
Sbjct: 115 VTSHIQEIIDFVQKLVDKGHAYITSSGSVYFDVDSFPSYGLLSGSKKEEWNQGEEIVKE- 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG+DL+FP
Sbjct: 174 -KKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGEQFDIHGGGVDLVFP 232

Query: 244 HHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENE AQS     +I      W+H  +L +   KMSKS GN I +NE L       + W
Sbjct: 233 HHENERAQSESLLGKI--WVKYWVHVAYLTINKEKMSKSLGNIIPLNEAL-------KKW 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------------------SKWPQTS 341
              V+R   L T YR  ID++ Q L +A   L                     S   + S
Sbjct: 284 GPSVLRFWYLSTKYRNSIDYSEQTLEQARSSLQRLKDAMGIIRSVIKEEPKSHSNEEEIS 343

Query: 342 TSKGIID--PAVLSALYNDLNTVSAIQALHKLAR------ESTKN-------HDLLPIFN 386
           T + II        A+ ND +T +A+  ++++A       + T++        D    FN
Sbjct: 344 TQREIISLIGKFHEAMSNDFDTATALSNIYEIANLVFTKIQYTRDFMGAMLAFDAFRQFN 403

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               ++  E    +  + +   I+ +V+ R IL   K +  +D IR  L + G  + D  
Sbjct: 404 YVFGVMDEEFSPSY--ETMYKVIDSVVEIRNILRARKMYDLSDEIRSVLANAGIKILD-- 459

Query: 447 NPDNGQRMTRWK 458
               G+  + W+
Sbjct: 460 ----GKEKSTWR 467


>gi|15922576|ref|NP_378245.1| cysteinyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|21264015|sp|Q96YC3|SYC_SULTO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15623366|dbj|BAB67354.1| 471aa long hypothetical cysteinyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 471

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/484 (37%), Positives = 247/484 (51%), Gaps = 64/484 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+IYNTL RKI   + ++P  ++MYVCGPTVYD+ HIG+ R  + FD + R LR     
Sbjct: 5   QIRIYNTLGRKIQPLETVEPQTVKMYVCGPTVYDYLHIGHGRTFVSFDAMVRYLRL--RG 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V+NITDIDDKII++A++           + I    T+ ++   T+L      H P
Sbjct: 63  YNVIRVQNITDIDDKIIKKAQE------TGKDWTEIVDFYTKDYLNALTQLKIEIDQH-P 115

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T HI ++I  IQ +I  GHAY A +  + FD  S P+YG  S  K +E   G    ++
Sbjct: 116 RVTYHIKEIINFIQKLIDKGHAYVAKSGSVYFDVDSFPSYGLLSGTKKEEWNQGEEFVKE 175

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK   P EP WESPWG+GRPGWHIECS MS  YLG+ FDIHGGG+DLIF
Sbjct: 176 --KKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSMRYLGEEFDIHGGGIDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS  A   ++    W+H  +L +   KMSKS GN I +NE L       + W
Sbjct: 234 PHHENERAQS-EALLGKQWVKYWVHVSYLTIRKEKMSKSLGNIIPLNEAL-------KKW 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------------------SKWPQTS 341
              V+R   L +HYR  +DF    L +A+  L                     SK     
Sbjct: 286 GPSVLRYWYLSSHYRSSLDFNEDSLEQAKNALTRLKDAISIIRDVIKEGPKYYSKDEDIQ 345

Query: 342 TSKGIID--PAVLSALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLPIFN 386
             + I++   +  +A+  D +T  A+  +H++                +    D L  FN
Sbjct: 346 VQRNIVELIKSFHAAMSEDFDTAKALSYIHEIVSLVFGKIQYSRDFMSAMLAFDALRQFN 405

Query: 387 ASAHILGIEV--CKEHLNKNISIAIEKLVQERLILLKMKK-FSSADYIRKQLESKGFILE 443
               ++  E     E L K I   +E   Q     L+MKK +  +D IR  L + G  + 
Sbjct: 406 YVFGVMDEEFYPTYEMLGKVIDAVVEIRNQ-----LRMKKMYDLSDQIRAILANAGVKVL 460

Query: 444 DYKN 447
           D K+
Sbjct: 461 DSKD 464


>gi|308176323|ref|YP_003915729.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743786|emb|CBT74758.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 483

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 176/494 (35%), Positives = 248/494 (50%), Gaps = 57/494 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++ Y+T    + +FQ +    +++Y CG TV    H+G+ R  IVFDVL R L Y    
Sbjct: 2   SLRFYDTKTASVRDFQPLAEGEVKLYYCGATVQGMPHVGHVRSAIVFDVLVRWLEYR--G 59

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDA-------ISIITSKNTQQFVKDTTRLAC 116
             VT VRN+TDIDDKI+E++          DA          +  +  Q+F +    L  
Sbjct: 60  FAVTTVRNVTDIDDKILEKSANSFAEDFEADAHYRPREEWYALAYRFEQEFARAYEALGV 119

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQ 173
             PT++PRAT HI +M  LI  +I  GHAY A   + ++ FD  S   YG+ +R+KID+ 
Sbjct: 120 RRPTYEPRATGHITEMHELISQLIERGHAYPAADDSGDVYFDVRSYEQYGALTRQKIDDM 179

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           +       +  KK+P DF LWK    ++P    W SPWGRGRPGWH+ECSAM+  YLG  
Sbjct: 180 QDAPDSDPR-GKKDPRDFALWKGLKDIDPPTASWPSPWGRGRPGWHLECSAMAGKYLGSE 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  EG KMSKS GN I+  E
Sbjct: 239 FDIHGGGLDLRFPHHENEMAQSNAAG--HGFANFWMHNGMVTYEGEKMSKSIGNTISPEE 296

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------W 337
           +L           A V+R  +    YR  +D+    LTEA   + +              
Sbjct: 297 MLALAD-------ARVVRYFLGQAQYRSMLDYRPDSLTEAGAAVERIDTFISNARYRLGA 349

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
              + +   +  A  +A+ +DLN   A+ ALH+  R    + D          L    A 
Sbjct: 350 AAEAIAATEVPEAFGTAMDDDLNVPMALAALHETVRLGNASRDSRDDAATAKALGQVLAM 409

Query: 389 AHILGIEVCKEHLNKNIS---IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFI 441
             +LG++    H +++ S    A+++LVQ +L         K ++ +D IR  L S G  
Sbjct: 410 TQVLGLDDAGSHESQDSSAEHAALDQLVQAQLAERAKARAAKDWARSDAIRDALGSAGIT 469

Query: 442 LEDYKNPDNGQRMT 455
           + D     +G R T
Sbjct: 470 VADSA---DGARWT 480


>gi|186684074|ref|YP_001867270.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186466526|gb|ACC82327.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 524

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 182/517 (35%), Positives = 252/517 (48%), Gaps = 85/517 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ ++   ++MY CG TVYD+ H+G+AR  IV+DV+ R L++   E 
Sbjct: 26  LTLYNTLTRRQEPFETVEAGKVKMYYCGVTVYDYCHLGHARACIVWDVVRRYLQFIGYE- 84

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKI+ RA  EH S+        + ++  + + +D  RL        PR
Sbjct: 85  -VRYIQNFTDIDDKILNRACVEHSSM------EAVANRFIKAYFEDMARLGIREADEYPR 137

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG--TRV--- 179
           AT+ +  +  LI  +   G AY A+ ++ +       YG  S RK+++ + G   RV   
Sbjct: 138 ATHTMNGIQRLIHELEKKGFAYPADGDVYYAVRQFAEYGKLSGRKLEDMQAGKSERVNVE 197

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KK+P DF LWK + P E  WESPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 198 DPEYQKKKDPFDFALWKAAKPGETAWESPWGAGRPGWHIECSAMVRDRLGDTIDIHAGGA 257

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNFITI ELL+     
Sbjct: 258 DLIFPHHENEIAQSEAVTG-KPLARYWLHNGMVKVDGEKMSKSLGNFITIRELLD----- 311

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLS--------KWPQTST 342
            R      +RL +L   YR PIDFT + +  A        E LL          W   + 
Sbjct: 312 -RGVNPMAVRLFVLTAQYRTPIDFTDEAIAAATNGWHTIKEGLLFGYQYGEKLGWDLGTG 370

Query: 343 SKGIIDPAVLSA------------LY---------NDLNTVSAIQALHKLARESTKNHDL 381
             G+      S             LY         ND N    +  L +LA+E  +   +
Sbjct: 371 DLGLGTEEEFSQSPIPNPQYPVPNLYVERFQEIVNNDFNFPGGLTVLFELAKELRREGHI 430

Query: 382 L-----------------PIFNASAHILG----IEVCKEHLNKNISIAIEKLVQERLILL 420
           L                       A +LG    IE   + +N      IE  +Q+R    
Sbjct: 431 LVHEGKTETSPDKLKHQWQTLVTLAGVLGLEAEIEAETDKINGLSDAEIEAKIQQRQEAR 490

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + K F+ +D IR +L+++G  L D ++       TRW
Sbjct: 491 QGKNFAESDRIRDELQAEGITLIDSRDG------TRW 521


>gi|260172516|ref|ZP_05758928.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920809|ref|ZP_07917049.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313694684|gb|EFS31519.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 493

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 264/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFIPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLSHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEELE-PME-----VVQYFLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SKWPQTS-TSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K   +S TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 DKITSSSATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|149926799|ref|ZP_01915058.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824351|gb|EDM83569.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 441

 Score =  278 bits (711), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 171/467 (36%), Positives = 238/467 (50%), Gaps = 62/467 (13%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYDF H+G+AR M+VFD+L R LR       VTYVRNITDIDDKII RA    
Sbjct: 1   MYVCGMTVYDFCHLGHARVMVVFDLLKRWLRA--SGYPVTYVRNITDIDDKIIRRA---- 54

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
             +   ++I  +T +      +D   L    P H+PRAT ++ +M  +IQ ++    AY 
Sbjct: 55  --VENGESIRSLTDRFIAAMHEDADALGIERPDHEPRATEYVAEMQDMIQTLMNKRLAYR 112

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG--- 203
           + + ++ F   + P YG  S + +DE + G RV     K +P DF+LWK +   EP    
Sbjct: 113 DDSGDVNFAVRAFPEYGRLSGKSLDELRAGERVGVSGSKNDPLDFVLWKSAKADEPADAK 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W+S +G GRPGWHIECSAMS   LG  FDIHGGG DL FPHHENEIAQS  A   E  A 
Sbjct: 173 WDSDFGVGRPGWHIECSAMSCKLLGNTFDIHGGGADLQFPHHENEIAQSVGATG-EGFAQ 231

Query: 264 IWIHNGFLNLE----GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
            W+HNGF+ +E      KMSKS  NF TI ++L+        + A V+R  +L   YR  
Sbjct: 232 YWMHNGFVRVETNGQSEKMSKSLNNFFTIRDILKV-------YDAEVVRFFILRAQYRSQ 284

Query: 320 IDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDPAVLSALYNDLNTVSA 364
           + ++   + +A+  L +               W Q   ++         A+ +D+NT  A
Sbjct: 285 LTYSEAHVQDAKAALGRLYTAVGDVQVAQSIDWTQEFEAR------FAEAMNDDMNTPIA 338

Query: 365 IQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKNISIA----------IEKL 412
           +  L ++A E  +  D  L     A A +LG+        +   +           I+ L
Sbjct: 339 VSVLFEMANEVNRTADQTLAARLKALAQVLGLLGRTAEAFQKAEVGDQAGALDEAEIQAL 398

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +  R      + FS AD IR+QL   G +LED +        T W++
Sbjct: 399 IDARAQAKADRDFSKADAIRQQLLDMGVVLEDKRGG-----ATEWRR 440


>gi|153807261|ref|ZP_01959929.1| hypothetical protein BACCAC_01539 [Bacteroides caccae ATCC 43185]
 gi|149130381|gb|EDM21591.1| hypothetical protein BACCAC_01539 [Bacteroides caccae ATCC 43185]
          Length = 493

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 181/494 (36%), Positives = 266/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEELE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFNGTHKLLTQAYTPMTIRFFILQAHYRSTVDFSNEALIASEKGLQRLIEAIDGL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P ++TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 GKVTPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNVIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S +        ++ L+++R+     K ++++D IR 
Sbjct: 412 LKELKETFHLFCFDIMGLKEEKGSSDSRENAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|53711487|ref|YP_097479.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|61216162|sp|Q64ZY1|SYC_BACFR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52214352|dbj|BAD46945.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 491

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 180/493 (36%), Positives = 260/493 (52%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RY 59
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L R 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 60  YYGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            Y    V YVRNITD+          +DKI ++AR E    P+      +      ++ K
Sbjct: 61  GYK---VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHK 111

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFS 166
               L  L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +      +YG  S
Sbjct: 112 AMEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDHHYGKLS 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R +D+    TR +  +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM  
Sbjct: 172 GRNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGR 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GN
Sbjct: 232 KYLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGN 290

Query: 285 FITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           FIT++E    + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +   S
Sbjct: 291 FITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDS 350

Query: 344 KGIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLL 382
              I PA  S             A+ +DLNT   I  L          +A  +T + D L
Sbjct: 351 LEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDL 410

Query: 383 PIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H    ++   KE +  +          ++ L+++R+     K ++++D IR +
Sbjct: 411 KDLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTALGFEIKDTKD 483


>gi|297526293|ref|YP_003668317.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255209|gb|ADI31418.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 480

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 182/484 (37%), Positives = 243/484 (50%), Gaps = 63/484 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL--YRLLRYYY 61
           +IK+YNTL RKI EF+ + P  ++MYVCGPTVYD+ HIG+ R  +V+D L  Y  LR Y+
Sbjct: 6   EIKLYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKRYFALRGYH 65

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V +V NITDIDDKII RA +E            +    T+ +++   +L      H
Sbjct: 66  ----VIHVMNITDIDDKIINRANREKRDW------REVAETYTRDYLESLRKLNVKVDLH 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PR T HI ++I  IQ +I  G+AY A +  + F+    P YG  S R    +++ ++  
Sbjct: 116 -PRVTEHIKEIIEFIQTLIDKGYAYIAPSGSVYFEVDKYPEYGELSGRT--NKELWSQEK 172

Query: 181 EKY-HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E    KK P DF LWK   P EP WE+PWGRGRPGWHIECS MSS YLGK FDIHGGG D
Sbjct: 173 EFISEKKKPYDFALWKAWKPGEPYWEAPWGRGRPGWHIECSVMSSRYLGKQFDIHGGGTD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS  A  ++     W+H G + +   KMSKS GN I + E         
Sbjct: 233 LIFPHHENERAQSEAAFGVKPWVKYWVHTGMVMMGSEKMSKSLGNIIPLREAF------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAV------- 351
           + W    +RL  L +HYR P+ FT + + + +    +    T+T K +   AV       
Sbjct: 286 KEWGPETLRLWYLTSHYRRPLVFTEESIKQTQKYYERLVSVTNTIKKLSREAVGLHRMND 345

Query: 352 ----------------LSALYNDLNTVSAIQALHKLARESTKN-------------HDLL 382
                             AL ND NT  A+  + +      K              + LL
Sbjct: 346 EDLKILDKLLEIRSRFHEALSNDFNTPQALAVISEFMTLVFKEIQYNPKYMLVLTAYKLL 405

Query: 383 PIFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             FN    +L   + +  E L   +   I  +V  R  L + K +  AD IR +L   G 
Sbjct: 406 REFNIVLGVLDKYLAETPEELETLLDNVINIVVDIRRELRERKLYDLADRIRAELGKHGI 465

Query: 441 ILED 444
           IL D
Sbjct: 466 ILMD 469


>gi|60679757|ref|YP_209901.1| cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81317170|sp|Q5LIT7|SYC_BACFN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|60491191|emb|CAH05939.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 491

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 180/493 (36%), Positives = 260/493 (52%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RY 59
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L R 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 60  YYGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            Y    V YVRNITD+          +DKI ++AR E    P+      +      ++ K
Sbjct: 61  GYK---VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHK 111

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFS 166
               L  L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +      +YG  S
Sbjct: 112 AMEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLS 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R +D+    TR +  +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM  
Sbjct: 172 GRNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGR 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GN
Sbjct: 232 KYLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGN 290

Query: 285 FITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           FIT++E    + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +   S
Sbjct: 291 FITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDS 350

Query: 344 KGIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLL 382
              I PA  S             A+ +DLNT   I  L          +A  +T + D L
Sbjct: 351 LEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDL 410

Query: 383 PIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H    ++   KE +  +          ++ L+++R+     K ++++D IR +
Sbjct: 411 KDLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTALGFEIKDTKD 483


>gi|116495760|ref|YP_807494.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|301067316|ref|YP_003789339.1| cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116105910|gb|ABJ71052.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|300439723|gb|ADK19489.1| Cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 444

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 175/469 (37%), Positives = 250/469 (53%), Gaps = 61/469 (13%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNAR  I FD + R   Y  G K VTYV N TD+DDKII  A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYR-GYK-VTYVSNFTDVDDKIINAAHKTG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            + P++ A   I +     F++DTT L     T  PRA+  IP +I  +Q++I   +AY 
Sbjct: 59  EA-PLDLAQRFIDA-----FMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAYA 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PEKYHKKNPADFILWKRSTPMEPG 203
            + ++ +      +YG  S + +DE + G        E   K++P DF LWK + P E  
Sbjct: 113 VDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEIS 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DL FPHHENEIAQS  A   ++   
Sbjct: 173 WESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQS-EAKTDKQFVR 231

Query: 264 IWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            W+HNGF+ +  +  KMSKS GNFIT++++ +T           V+R  M  T YR PI 
Sbjct: 232 YWMHNGFVTIGEDDEKMSKSLGNFITVHDIRKTVD-------PQVLRFFMAGTQYRMPIR 284

Query: 322 FTVQRLTEAEILLSKW-------------------PQTSTSKGIIDPAVLSALYNDLNTV 362
           ++   L  A   L++                    PQ +     +    ++A+ +D+N  
Sbjct: 285 YSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQITKQLQTLKDRFVTAMDDDINVQ 344

Query: 363 SAIQALHKLAR--------ESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           + +  L  LA+        E+ K+   +DLL  ++A   I G+    +   K++   I+ 
Sbjct: 345 NGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAWLQIFGVVFADQ---KSLDADIDA 401

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           LV+ R      K F+ +D IR QL ++G ILED   P    + TRW+++
Sbjct: 402 LVKARDAARAAKDFAKSDQIRDQLAAQGIILED--TP----QGTRWRRQ 444


>gi|318058498|ref|ZP_07977221.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318079336|ref|ZP_07986668.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 466

 Score =  278 bits (710), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 166/477 (34%), Positives = 244/477 (51%), Gaps = 62/477 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   E 
Sbjct: 3   IRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V +VRN+TDIDDKII + A Q  P   I         +N + F      L CL PT++P
Sbjct: 62  -VVFVRNVTDIDDKIINKSAEQGRPWWAIG-------YENERAFNAAYDALGCLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI +MI +++ +I  GHAYE+   + FD  S   Y   S +++D     +   E  
Sbjct: 114 RATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFLEYLELSHQELDNLLQPSGEGET- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIFP
Sbjct: 173 GKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W 
Sbjct: 233 HHENEIAQSKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRWR 283

Query: 304 APVIRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQTSTSKGI 346
             V+R  +   HYR  I+++                 VQR+TE    L+       ++  
Sbjct: 284 PIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTE----LNGGEVAPAAE-- 337

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVC 397
           + PA   A+ +DL    A+  LH   R+                L    A   +LG++  
Sbjct: 338 VPPAFAEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPL 397

Query: 398 ----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      E L+  +   +  ++++R      K + +AD IR QL   G  +ED
Sbjct: 398 DPQWATGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIED 454


>gi|119960845|ref|YP_946695.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|166200128|sp|A1R383|SYC_ARTAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119947704|gb|ABM06615.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 484

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 171/484 (35%), Positives = 246/484 (50%), Gaps = 58/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T   ++ +F  ++     +Y CG TV    H+G+ R  I FD L R L +  G +
Sbjct: 3   LRFYDTASAEVRDFVPLEDGKASVYYCGATVQGMPHVGHVRSAIAFDQLTRWLEFR-GLR 61

Query: 65  CVTYVRNITDIDDKIIERARQE-------HPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            VT VRN+TDIDDKI+ ++ Q         PS    +    +  +  Q+F      L   
Sbjct: 62  -VTVVRNVTDIDDKILAKSAQSFGPDWDAEPSARQTEEWWALAYRYEQEFENAYESLGVQ 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQK 174
            PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YGS +R+ ID+ +
Sbjct: 121 RPTYEPRATGHIPEMHTLIQRLIDRGHAYPALDDSGDVYFDVRSWSKYGSLTRQNIDDMQ 180

Query: 175 MGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G    +   K++P DF LWK      P+   WESPWG GRPGWH+ECSAM + YLG  F
Sbjct: 181 -GAPDADPRGKRDPRDFALWKGFKDGEPVTAKWESPWGAGRPGWHLECSAMVTKYLGPRF 239

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDL FPHHENE+AQS  A   ++ AN W+HNG +  EG KMSKS GN ++  E+
Sbjct: 240 DIHGGGLDLRFPHHENEMAQSQAAG--DEFANFWMHNGMVTYEGEKMSKSIGNTVSPAEM 297

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----QTSTSKGII 347
           LE            V+R  +   HYR  +D+    L EA   + +      + S+  G  
Sbjct: 298 LELAS-------PRVVRYYLGQAHYRSILDYRPTSLQEAAAAVERIDGFIHKASSKVGTG 350

Query: 348 DP----------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------- 389
            P          A ++A+ +DLN   A+  LH+  R          +  A A        
Sbjct: 351 APDVSPQANMPAAFIAAMDDDLNVPQALGVLHETVRAGNTALASGDLEGAKAALYSVLSM 410

Query: 390 -HILGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             +LG++  K        EH    + + IE  ++ R      K ++++D IR  L + G 
Sbjct: 411 TEVLGLDSVKRPEAVQGREH--AALEVLIEAQLEARAAARANKDWAASDAIRDTLAAAGV 468

Query: 441 ILED 444
           ++ED
Sbjct: 469 VVED 472


>gi|253564451|ref|ZP_04841908.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251948227|gb|EES88509.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301161219|emb|CBW20757.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 491

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 180/493 (36%), Positives = 260/493 (52%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RY 59
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L R 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTRL 60

Query: 60  YYGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            Y    V YVRNITD+          +DKI ++AR E    P+      +      ++ K
Sbjct: 61  GYK---VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHK 111

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFS 166
               L  L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +      +YG  S
Sbjct: 112 AMEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLS 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R +D+    TR +  +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM  
Sbjct: 172 GRNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGR 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GN
Sbjct: 232 KYLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGN 290

Query: 285 FITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           FIT++E    + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +   S
Sbjct: 291 FITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDS 350

Query: 344 KGIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLL 382
              I PA  S             A+ +DLNT   I  L          +A  +T + D L
Sbjct: 351 LEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDL 410

Query: 383 PIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H    ++   KE +  +          ++ L+++R+     K ++++D IR +
Sbjct: 411 KDLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTALGFEIKDTKD 483


>gi|269926934|ref|YP_003323557.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790594|gb|ACZ42735.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 453

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 171/461 (37%), Positives = 247/461 (53%), Gaps = 41/461 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL  +  EF  ++P N+ MYVCGPTVY  AHIG+A    VFD++ R L Y  G K
Sbjct: 2   LYIHNTLTDRKEEFIPLNPPNVLMYVCGPTVYGPAHIGHAMSYTVFDIVRRYLEYK-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII R+ +E   I   D    + ++  ++F++    L  L   + PR
Sbjct: 61  -VKHVQNFTDVDDKIIARSNEE--GISWKD----LATRYEREFLRQMDSLNILRAHYYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A+  IP++I  IQ +I  G+AY  + ++ F       YG  S R++DE + G R+     
Sbjct: 114 ASEVIPEIIEDIQRLIARGYAYVVDGDVYFRVLKDEEYGELSHRRLDEMRAGARIEADPR 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   EP WESPWG GRPGWHIEC+ M+   LG+  DIHGGG DLIFPH
Sbjct: 174 KEHPMDFALWKSAKLGEPYWESPWGPGRPGWHIECTTMNLRMLGEQIDIHGGGADLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS            WIHNG L LE  KM++S GN ++I+ ++       R + A
Sbjct: 234 HENEIAQSEAITGKHPFVRYWIHNGLLQLEEEKMARSVGNVLSIDFIV-------RQYGA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI-LLSKWPQTSTSKGIIDPA----------VLS 353
              RL +L +HYR+P++F+ + L  A+  +L  +       G   PA            S
Sbjct: 287 DAFRLFVLSSHYRKPLNFSFEALESAKRGVLRLYQAVGEDAG---PAGSEFKDFRQRFES 343

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
           A+ +D NT  AI  L +LAR       E         +    + +LG+ +  + +    +
Sbjct: 344 AMDDDFNTPQAIAVLFELARDVNALRSEGKDASTAAGLLRELSALLGLRL--DSVGGEAT 401

Query: 407 IA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            A   I+ +V  R  L   + +  +DYIR +L   G  + D
Sbjct: 402 EAEPFIDLIVGVRDKLRASRIYELSDYIRDKLGELGVSVMD 442


>gi|296126677|ref|YP_003633929.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018493|gb|ADG71730.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 472

 Score =  277 bits (709), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 266/494 (53%), Gaps = 59/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR-YYY 61
           K+I +YN+L R+   F+ I    + MY CGPTVY++AHIGN R  +  D+L R+L  Y Y
Sbjct: 2   KEIVLYNSLTREKEVFKPIKEGEVGMYSCGPTVYNYAHIGNFRAYVFSDLLRRVLEDYGY 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V  V N+TD+DDK I+ +++ H  I +N+     T K  + F +D   L     + 
Sbjct: 62  N---VKLVMNLTDVDDKTIKNSKENH--ISLNE----YTKKYKEAFFEDIKTLGIKKASV 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS---RRKIDEQKMGTR 178
            P AT+HI +MI +I+ +  +GH YEA+  + F  S+ P YG  +   ++++ E   G  
Sbjct: 113 NPAATDHIKEMIDIIELLKKNGHTYEADGSVYFKISTFPQYGELANLDKQELLEGASGRV 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           + ++Y K+N +DF+LWK  T  E G   W+SP+G+GRPGWHIECSAMS  YLGK FDIH 
Sbjct: 173 LNDEYDKENASDFVLWKAYTE-EDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHT 231

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D  FPHHENEIAQ+  A   EK  N W+H   L ++G KMSKS GNF T+ +LL+  
Sbjct: 232 GGVDNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLD-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSK- 344
               +      IR +++ +HYR+ ++FT++          R+ +    L    +T T++ 
Sbjct: 289 ----KGLSKEAIRYSLINSHYRKQLNFTIEGIKQSQSAIDRVNDFVFRLKDINKTDTNEI 344

Query: 345 -----GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
                  ID A      ++YNDLN   A+  L  L + +  + D +        I  IE 
Sbjct: 345 NDKLSKEIDEANDKFSDSVYNDLNISEALGVLFTLIKNANTSFDSINNETRDKMIKFIER 404

Query: 397 CKEHLN----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               +N          K+    I KL++ER +  K K +  AD IR +L S G  + D  
Sbjct: 405 VNNIINCFKINDEEENKDDEEEINKLIEERSLAKKEKNYQKADEIRNKLLSMGIEIMD-- 462

Query: 447 NPDNGQRMTRWKQK 460
            P    +  +WK+K
Sbjct: 463 TP----QGVKWKRK 472


>gi|255010223|ref|ZP_05282349.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313148019|ref|ZP_07810212.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313136786|gb|EFR54146.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 491

 Score =  277 bits (709), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 179/493 (36%), Positives = 260/493 (52%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RY 59
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L R 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 60  YYGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            Y    V YVRNITD+          +DKI ++AR E    P+      +      ++ K
Sbjct: 61  GYK---VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHK 111

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFS 166
               L  L+P+ +P A+ HI + I L++ I+  G+AYE+   + FD +      +YG  S
Sbjct: 112 AMEALNVLSPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLS 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R +D+    TR +  +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM  
Sbjct: 172 GRNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGR 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GN
Sbjct: 232 KYLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGN 290

Query: 285 FITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           FIT++E    + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +    
Sbjct: 291 FITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDG 350

Query: 344 KGIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLL 382
              I PA  S             A+ +DLNT   I  L          +A  +T + D L
Sbjct: 351 LEKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDL 410

Query: 383 PIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H    ++   KE +  +          ++ L+++R+     K ++++D IR +
Sbjct: 411 KELKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTALGFEIKDTKD 483


>gi|255692897|ref|ZP_05416572.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260621346|gb|EEX44217.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 493

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 180/494 (36%), Positives = 263/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIEKKARLEELE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVQKILDAGYAYESEGSVYFDVAKYNKDHHYGRLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT++E    T K   +++    IR  +L  HYR  +DF+          +QRL EA   L
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351

Query: 335 SK-WPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            K  P  +TS+GI    +      A+ +DLNT   I  L + AR         +T + + 
Sbjct: 352 EKITPAATTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRK 433
           L     + H+   ++      K  S          ++ L+++R+     K ++++D IR 
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471

Query: 434 QLESKGFILEDYKN 447
            L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKD 485


>gi|283458741|ref|YP_003363379.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134794|dbj|BAI65559.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 472

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 168/475 (35%), Positives = 245/475 (51%), Gaps = 44/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y++    I EF+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY  G K
Sbjct: 3   MRFYDSASATIREFEPVVPGEARIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYR-GLK 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPI---NDAISIITSKNTQQFVKDTTRLACLAPT 120
            VT VRN+TDIDDKI+ + A    P       N+    +  +  + F +    L    PT
Sbjct: 62  -VTTVRNVTDIDDKILAKSAESMEPGFEGEFPNEQWWALAYRFEKVFAQAYAALGIDPPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ + + +++ +   
Sbjct: 121 YEPRATGHIPEMFALIQRLIDRGHAYPALDDSGDVYFDVRSWDKYGALTNQSVEDMQDSA 180

Query: 178 RVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK      P+   WESPWGRGRPGWH+ECSAM+  YLG  FDIH
Sbjct: 181 DADPR-GKRDPRDFALWKGYKEGEPLTASWESPWGRGRPGWHLECSAMAGKYLGSRFDIH 239

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  ++L+ 
Sbjct: 240 GGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPAQMLQM 297

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDP---- 349
            +         V+R  +   HYR  +D+    L EA   + +     + ++ ++ P    
Sbjct: 298 AR-------PLVVRYYLGSAHYRSILDYRPSSLQEAATAIERVEAFLAAAQDVLKPGREV 350

Query: 350 --AVLSALYNDLNTVSAIQALHKLARES----TKNHDLLPIFN---ASAHILGI------ 394
             A   A+ +D+N   A+  LH+  R          D     N   A A +LG+      
Sbjct: 351 PEAFAEAMDDDVNIPRALAVLHEQTRAGNAALAAGEDASEAANAVMAMAEVLGLAQLMSF 410

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E      ++ +   I+ ++ ER      K ++ AD +R  L S G  ++D  N
Sbjct: 411 NAEGTSGAEHEALDALIQAVLAERADARAQKDWAKADAMRDLLASAGVQVKDGAN 465


>gi|121535688|ref|ZP_01667492.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305719|gb|EAX46657.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 370

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 189/326 (57%), Gaps = 15/326 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL ++  EF   +P  ++MYVCG T Y+  HIGNARP I +DV+ R L +     
Sbjct: 3   LRVYNTLTKQKEEFVPREPGKVKMYVCGVTPYNHPHIGNARPFITWDVIRRYLEHR--GF 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII  A QE  +         I ++    + +   +L        PR
Sbjct: 61  AVFHVQNFTDIDDKIINTANQEGVTW------DTIANRYIAAYFEVMDKLNVRRAHVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HI  +I ++Q +I  G+AY    ++ +       YG  S R +++ K G R+     
Sbjct: 115 VSDHIGDIIAIVQRLIDKGYAYTVGGDVYYSVEKFAPYGQLSGRSLEDMKAGARIDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+  YLG  FD HGGG DLIFPH
Sbjct: 175 KRHPMDFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMALKYLGNGFDFHGGGSDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS            W+HNGF+ +   KMSKS GNF  + ++L         +P 
Sbjct: 235 HENEIAQSEAYTGEAPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILA-------HYPP 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA 330
            V+R  +L THYR P+DF+ +RL EA
Sbjct: 288 EVLRFFILSTHYRSPLDFSDERLAEA 313


>gi|311112938|ref|YP_003984160.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944432|gb|ADP40726.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 474

 Score =  277 bits (708), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 169/479 (35%), Positives = 249/479 (51%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y++    I +F+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY  G K
Sbjct: 1   MRFYDSATSSIRDFEPVVPGEARIYYCGATVQGEPHVGHIRSALVFDQLARWMRYR-GFK 59

Query: 65  CVTYVRNITDIDDKIIERARQ--------EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            VT VRN+TDIDDKI+ ++ +        EHP    N+    +  +  + F +    L  
Sbjct: 60  -VTTVRNVTDIDDKILAKSVESAQPTYTGEHP----NEQWWALAYRYEKVFARAYATLGI 114

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQ 173
             PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ +D+ 
Sbjct: 115 DPPTYEPRATGHIPEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGALTRQSVDDM 174

Query: 174 KMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           +       +  K++P DF LWK      P+   W+SPWGRGRPGWH+ECSAM+  YLGK 
Sbjct: 175 QDSADADPR-GKRDPRDFALWKGYKEGEPLTAAWDSPWGRGRPGWHLECSAMAGKYLGKR 233

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  +
Sbjct: 234 FDIHGGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPVQ 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGII- 347
           +L+  +         V+R  +   HYR  +D+    L EA + + +      +TS+ +  
Sbjct: 292 MLQQAR-------PLVVRYYLGSAHYRSVLDYRPTSLEEARVAIERVEAFLAATSELMAP 344

Query: 348 DPA-------VLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILG 393
           DP           AL +D+N   A+  LH+  R             +      A A++LG
Sbjct: 345 DPQERRVPQDFADALDDDMNIPRALAVLHEQTRAGNAALAAGADASEFANAVWAMANVLG 404

Query: 394 IEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +           S A        I  ++++R      K +++AD +R  L + G  ++D
Sbjct: 405 LTSLMNLDGSGASGAEHQALDALIHTILEQRASARAEKDWATADRMRDVLAAAGITVKD 463


>gi|307701600|ref|ZP_07638617.1| cysteine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613279|gb|EFN92531.1| cysteine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 538

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 144/341 (42%), Positives = 200/341 (58%), Gaps = 26/341 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ ++   + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLNTGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
           AT HIPQ I L+Q +I  GHAY +    + F   S+P+YGS + +++      E      
Sbjct: 113 ATGHIPQQIALVQRLIDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGW--GFARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDK 324


>gi|88809002|ref|ZP_01124511.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786944|gb|EAR18102.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 499

 Score =  276 bits (707), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 181/505 (35%), Positives = 247/505 (48%), Gaps = 78/505 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++  NTL R+   FQ +    + +Y CG TVYD  H+G+AR  I +DVL R L   
Sbjct: 1   MPVSLRFTNTLTRRTEPFQPLKEGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYL--I 58

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    VT+V+N TDIDDKI++RA +E  S+       +++ +N   F  D   L  L P 
Sbjct: 59  WSGYAVTFVQNFTDIDDKILKRAAEEGSSM------EVVSERNIDAFHADMDALGILRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
             PRAT  +  +  LI  +   G AY A  ++ F       YG  S R + +Q+     R
Sbjct: 113 RMPRATRCLEGIRALISELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLADQQTNADGR 172

Query: 179 VP--EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           V   E+  K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH G
Sbjct: 173 VADAEEARKQHPFDFALWKGAKAGEPSFPSPWGDGRPGWHIECSAMVREELGDTIDIHLG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS  A   ++ A +W+HNG +N+ G KMSKS GNF TI  LLE+  
Sbjct: 233 GADLVFPHHENEIAQSEAATG-QELARVWLHNGMVNVGGEKMSKSLGNFTTIRALLES-- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGII 347
                  A  +RL +L  HYR+P+DFT   L           A + L      +   G  
Sbjct: 290 ----GLSAMTLRLFVLQAHYRKPLDFTSDALEAATTGWKGLNAALSLGDLHAEALGWGAA 345

Query: 348 DP----AVLS------------------ALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            P    AVL+                  A+ +DLN+  A+  L  LAR      + L   
Sbjct: 346 APMNGGAVLASAPSANEMLLGARQRFSDAMDDDLNSSGALAVLFDLARPLRALANRLDRG 405

Query: 386 NASAH--------------------ILGIEVCKEHLNKN------ISIAIEKLVQERLIL 419
           +A  H                    +LG+ +  EH + N       S AIE  ++ R + 
Sbjct: 406 DAPTHSDDEGRGLQQRWLLLRELAGVLGLRL--EHPSGNDTETDLDSQAIEAAIEARRMA 463

Query: 420 LKMKKFSSADYIRKQLESKGFILED 444
            + K F+ AD IR +L ++G  L D
Sbjct: 464 KQSKDFAEADRIRAELTAQGIELID 488


>gi|193214317|ref|YP_001995516.1| cysteinyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087794|gb|ACF13069.1| cysteinyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 489

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 183/487 (37%), Positives = 251/487 (51%), Gaps = 60/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL RK   F+ +    + +YVCGPTVY  +H+G+A+  + FDV+ R LR   G K
Sbjct: 12  LQIYNTLTRKKEIFEPLVDGRVSLYVCGPTVYGHSHLGHAKSYVSFDVVARWLRQL-GYK 70

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YV+NITD+          DDKII +A++EH   P+      +     + F  D   L
Sbjct: 71  -VKYVQNITDVGHLTDDADEGDDKIIAQAKREHID-PME-----VAQFYARSFFADMDAL 123

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQ 173
               P   P AT HIP+ I LI+ +I   HAYE N  + FD +S   YG  S R   +E 
Sbjct: 124 GNQRPNISPTATGHIPEQIALIEQLIEKNHAYEVNGNVYFDVASFEGYGKLSGRINQEEL 183

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           + G RV  +  K++PADF LWK++ P     W SPWG G PGWHIECSAMS  YLG+ FD
Sbjct: 184 EAGARVEVRSEKRHPADFALWKKAEPNHLMKWASPWGVGYPGWHIECSAMSMKYLGETFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGL+  FPHH+ EIAQS CA   +     W+HN  + + G+KM KS GN I++ ++ 
Sbjct: 244 IHGGGLENQFPHHDCEIAQSECATG-KPFVRYWMHNNMVTVNGQKMGKSLGNSISLKDIF 302

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------TSKG 345
             KKF     P  VIR  +L +HYR  +DF+   +  A+  L K  +++         K 
Sbjct: 303 --KKF-----PPVVIRFFILQSHYRSTLDFSDAAIEAAQTGLKKLQESAARLNEAQAGKT 355

Query: 346 IIDPA-----VLSALYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASA 389
            +D A        A+ +D N   AI  L  LARE           +T   +    F   A
Sbjct: 356 DLDLAPYEQRFTDAMNDDFNAPMAIAVLFDLAREINSALAADGLSATSLENAKAFFETYA 415

Query: 390 H-ILGI-------EVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESKGF 440
           + +LGI       +      +K     +  LV E R    K K F++AD IR  L   G 
Sbjct: 416 NGVLGILSTAGESDAAGSDKDKERLEGVMALVLELRQAARKNKDFATADKIRDGLTGIGI 475

Query: 441 ILEDYKN 447
            ++D K+
Sbjct: 476 EVKDTKD 482


>gi|255327696|ref|ZP_05368762.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295370|gb|EET74721.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 472

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 168/475 (35%), Positives = 246/475 (51%), Gaps = 44/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y++    I EF+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY  G K
Sbjct: 3   MRFYDSASATIREFEPVVPGEARIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYR-GLK 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPI---NDAISIITSKNTQQFVKDTTRLACLAPT 120
            VT VRN+TDIDDKI+ + A    P       N+    +  +  + F +    L    PT
Sbjct: 62  -VTTVRNVTDIDDKILAKSADSMEPGFEGEFPNEQWWALAYRFEKVFAQAYAALGIDPPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+M  LIQ++I  GHAY A   + ++ FD  S   YG+ + + +++ +   
Sbjct: 121 YEPRATGHIPEMFALIQHLIDRGHAYPALDDSGDVYFDVRSWDKYGALTNQSVEDMQDSA 180

Query: 178 RVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK      P+   WESPWGRGRPGWH+ECSAM+  YLG  FDIH
Sbjct: 181 DADPR-GKRDPRDFALWKGYKEGEPLTASWESPWGRGRPGWHLECSAMAGKYLGSRFDIH 239

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  ++L+ 
Sbjct: 240 GGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPAQMLQM 297

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDP---- 349
            +         V+R  +   HYR  +D+    L EA   + +     + ++ ++ P    
Sbjct: 298 AR-------PLVVRYYLGSAHYRSILDYRPSSLQEAATAIERVEAFLAATQDVLKPGREV 350

Query: 350 --AVLSALYNDLNTVSAIQALHKLARES----TKNHDLLPIFN---ASAHILGI------ 394
             A   A+ +D+N   A+  LH+  R          D     N   A A +LG+      
Sbjct: 351 PQAFAEAMDDDVNIPRALAVLHEQTRAGNAALAAGEDASEAANAVMAMAEVLGLAQLMSF 410

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E      ++ +   I+ ++ ER      K ++ AD +R  L S G  ++D  N
Sbjct: 411 NAEGTSGAEHEALDALIQAVLAERADARAQKDWAKADAMRDLLASAGVQVKDGAN 465


>gi|152964879|ref|YP_001360663.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082067|sp|A6W6G0|SYC_KINRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151359396|gb|ABS02399.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 471

 Score =  276 bits (706), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 169/475 (35%), Positives = 251/475 (52%), Gaps = 54/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           + ++++    + EF  + P  + +YVCG T     H+G+ R  +VFDVL R L+R  Y  
Sbjct: 3   LHLHDSAAGAVREFAPLVPGQVGIYVCGATPQGSPHLGHVRAQVVFDVLRRWLVRSGY-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT VRN+TDIDDKI+ +A +       +        +  ++F      L  L PT +P
Sbjct: 61  -EVTLVRNVTDIDDKILAKAAEAGTEWWAH------AYRFEREFSAAYAALGVLPPTVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           RAT H+P+M+ LIQ ++  GHAY A   + ++ FD  S P YG  + +++D+ +      
Sbjct: 114 RATGHVPEMVELIQRLVERGHAYAAADGSGDVYFDVRSWPAYGELTHQRLDDMEPAADAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            +  K++P DF LWK + P EP    W +PWGRGRPGWH+ECSAM+  YLG  FD+HGGG
Sbjct: 174 PR-GKRDPRDFALWKGAKPGEPATASWATPWGRGRPGWHLECSAMAGRYLGPRFDVHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENE AQS  A   +  AN W+HN F+ + G KMSKS GN + +  LLET + 
Sbjct: 233 LDLRFPHHENEQAQSRAAG--DGFANFWLHNHFVTMSGEKMSKSLGNVLGVPHLLETHR- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIID 348
                 A V+R  ++  HYR  ++ +   L EAE   S+               + G + 
Sbjct: 290 ------AVVLRYYLVSGHYRTHLEHSENSLVEAEAAYSRLEGLLRRAAERLGGLAAGEVP 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAH------ILGIEVCKE 399
            A  +A+ +DL T +A+  LH+ AR    +    D   +  A+        +LG++   E
Sbjct: 344 AAFAAAMDDDLATPTALAVLHETARAGNSALAAGDEAALRTAAGQLRAGLDVLGLDPFAE 403

Query: 400 HLNKNIS------IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILED 444
                 +       A++ LV+ RL         K F++AD +R  L+S G ++ED
Sbjct: 404 PWASQTTGSDAARTALDVLVRARLEDRATARATKDFATADAVRDSLKSAGIVIED 458


>gi|309803791|ref|ZP_07697877.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164200|gb|EFO66461.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 357

 Score =  276 bits (706), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 149/340 (43%), Positives = 201/340 (59%), Gaps = 23/340 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E+ S+      + +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKENVSV------ADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK + T  E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS  A   +K  N W+HNGF+ +  +  KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQS-EAKTGQKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
             +     V+R  M    YR+PI++T   L +AE +L ++
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRY 324


>gi|21674967|ref|NP_663032.1| cysteinyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|34222752|sp|Q8KAK2|SYC_CHLTE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21648199|gb|AAM73374.1| cysteinyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 487

 Score =  276 bits (706), Expect = 6e-72,   Method: Compositional matrix adjust.
 Identities = 177/491 (36%), Positives = 259/491 (52%), Gaps = 66/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R    F+ I P    +YVCGPTVY  AH+G+A+  + FDV+ R LR+   E+
Sbjct: 4   LHIYNSLTRTKEPFKPIHPGLATIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHVGEEQ 63

Query: 65  C--VTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
              V YV+NITD+          +DKI ++ARQE    P+      +    T+ F +D  
Sbjct: 64  GYKVRYVQNITDVGHLTDDADEGEDKIQKQARQERIE-PME-----VAQYYTRSFYEDMD 117

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
           RL    P   P AT HIP+ I L++ +I  GHAYE+N  + FD +S   YG  S R   E
Sbjct: 118 RLGVERPNIAPTATGHIPEQIALVERLIESGHAYESNGNVYFDVNSFEGYGKLSGRTDQE 177

Query: 173 Q-KMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYL 227
             + G RV E+  K+NP+DF LWK++   EPG    W+SPWG G PGWH+ECSAM+  YL
Sbjct: 178 ALQSGGRVAERSDKRNPSDFALWKKA---EPGHIMKWQSPWGEGYPGWHLECSAMAMKYL 234

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIHGGG++  FPHH+ EIAQS  A   +     W+HN  + ++G KM KS  NF+ 
Sbjct: 235 GDTIDIHGGGMENKFPHHDCEIAQSEAATG-KPFVRYWMHNNMVTVDGVKMGKSLKNFVN 293

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           + EL       G+  P  VIR  +L +HYR P+DF+   +  ++    K  +T       
Sbjct: 294 LKELF------GKFDPL-VIRFFILQSHYRSPLDFSEAAIRASQSGFEKLQETYKRLVES 346

Query: 341 STSKGIIDPA-----VLSALYNDLNTVSAIQ-----------ALHKLARESTKNHDLLPI 384
           +  KG +D A     +  AL +D NT  AI            AL K   ++        +
Sbjct: 347 AEGKGQLDVATFEQKITDALNDDFNTPVAIAVLFEFIKALNGALDKDGLDAASKSGAQNL 406

Query: 385 FNASA-HILGIEVCKEHLNKNISIAIEKLVQERL-ILLKMKK-------FSSADYIRKQL 435
           F++ A  +LGI   ++ L    S    + + + + +LL+++K       F+++D IR  L
Sbjct: 407 FDSYAGKVLGILKSRDELLAGESGESAQTLNDVMAVLLELRKEARASKDFATSDKIRDLL 466

Query: 436 ESKGFILEDYK 446
             +G  ++D +
Sbjct: 467 MERGIEIKDTR 477


>gi|238926117|ref|ZP_04657877.1| cysteinyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
 gi|238886007|gb|EEQ49645.1| cysteinyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
          Length = 476

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 140/334 (41%), Positives = 195/334 (58%), Gaps = 17/334 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L +  G +
Sbjct: 2   ITVYNTMTRKKEEFHPLREGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLAHK-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +E  +         I+ +    +      L        PR
Sbjct: 61  -VRYIQNFTDVDDKIINAANREDVTW------KEISDRYIAAYFTAMDALNVRRADVFPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  +  +I +I+ +I  G+AY     ++ +   +   YG  S R +D+ + G RV    
Sbjct: 114 VSETMDDIIRMIETLIERGYAYVTETGDVYYSVEAFAPYGCLSGRSLDDMEAGARVEVNA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIFP
Sbjct: 174 TKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIFP 233

Query: 244 HHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  C D   K A  W+HNGF+ ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQADPCIDADVKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KEY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           P  VIR  +L THYR P+DF+ +RL EA+  L++
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLQEAQTALAR 320


>gi|254430939|ref|ZP_05044642.1| cysteinyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625392|gb|EDY37951.1| cysteinyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 505

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 167/413 (40%), Positives = 221/413 (53%), Gaps = 65/413 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           +++ NTL R+   F+ + P  + +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 3   LRLTNTLTRRTEAFEPLQPGTVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI+ RA +E  S+        ++++N Q F  D  RL  L P   
Sbjct: 61  --AVTFVQNYTDIDDKILRRAAEEGSSM------EAVSARNIQAFEADMARLNILPPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP 180
           PRAT  +  +  LIQ +   G AY A+ ++ F       YG  S R++ EQ+     RV 
Sbjct: 113 PRATRSLEAIRALIQELEARGAAYSADGDVYFAVMRHAGYGKLSGRELSEQQNNAAGRVA 172

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGPGRPGWHIECSAMVREELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   E  A  W+HNG +N+ G KMSKS GNF TI  LL+     
Sbjct: 233 DLIFPHHENEIAQSEAATGRE-LARYWLHNGMVNVGGEKMSKSLGNFTTIRGLLD----- 286

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             S  +P+ +RL  L  HYR+P+DFT + L  A    + W   + + G+           
Sbjct: 287 --SGISPMTLRLFTLQAHYRKPLDFTAEALDAAA---AGWSGLNAALGLNGGEDGSAGQE 341

Query: 347 --------------IDPAVL------------SALYNDLNTVSAIQALHKLAR 373
                          DPA L            +A+ +DLNT +A+  L +LAR
Sbjct: 342 KATEPEAITAVPIATDPASLREELAALQRRFIAAMDDDLNTAAALAVLFELAR 394


>gi|226363790|ref|YP_002781572.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254781690|sp|C1BAC4|SYC_RHOOB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226242279|dbj|BAH52627.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 464

 Score =  276 bits (705), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 243/471 (51%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L  +  + 
Sbjct: 3   LRLFDTETRALRDFAPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWLLAH--DY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDI+DKI+ +A +     P  +  +      T  +     +L  L P+ +PR
Sbjct: 61  DVAFVRNVTDIEDKILNKAAE--AGRPWWEWAATFERSFTWAY----QQLGVLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ ++Q +I +GHAY A  ++ FD  S P YGS S  K+D+   G    E   
Sbjct: 115 ATGHITQMVEMMQRLIDNGHAYAAGGDVYFDVRSYPRYGSLSGHKLDDVHQGESAGEC-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GGLDL+FPH
Sbjct: 173 KRDPRDFTLWKAEKPGEPSWPTPWGRGRPGWHLECSAMAEFYLGAAFDIHCGGLDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA   +  A  W+HNG++ + G KMSKS GN +++  +L+  +        
Sbjct: 233 HENEIAQAKCAG--DDFAQYWLHNGWVTMGGEKMSKSLGNVLSVPNVLKKVR-------P 283

Query: 305 PVIRLAMLMTHYREPIDFT---------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
             +R  +   HYR  ++++           R  E+ ++ ++      + G    A   AL
Sbjct: 284 QELRYYLGSAHYRSMLEYSDTALDEGAAAYRRIESFVMRTQERAGEVTIGRWTDAFARAL 343

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---------HILGIEVCKEHLNKN-- 404
            +DL   +A+  +H   RE     D   +  A A          ILG++   EH  +   
Sbjct: 344 DDDLAVPAALAEVHGKVREGNIALDGGDLEGARAIASQVRAMLGILGVDPLDEHWTQETA 403

Query: 405 --------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                   + + +   ++ R      K ++ AD +R +L   G  + D  N
Sbjct: 404 DASAATDALDVLVRAELERRQTARAEKNWAVADEVRDRLIRAGIEVTDTPN 454


>gi|72382588|ref|YP_291943.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|109894920|sp|Q46JT8|SYC_PROMT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72002438|gb|AAZ58240.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 500

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 187/516 (36%), Positives = 257/516 (49%), Gaps = 82/516 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K  NTL +K  +F +I+P+ +++Y CG TVYD  H+G+AR  + +DVL R L +   E 
Sbjct: 3   LKFTNTLSKKKEDFISINPNQVKIYCCGVTVYDLCHLGHARSYLNWDVLRRFLIWKGFE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII RA +E  S         ++ +N  +F KD   L+ L PT  PR
Sbjct: 62  -VKFVQNFTDIDDKIINRANKEGCST------DELSERNIDEFHKDMDTLSILRPTSMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  + Q+I  I+ +     AY +N ++ F      NYG  S R+I++Q        +  
Sbjct: 115 ATKCLHQIINFIEELEQKKVAYSSNGDVYFSVDKHKNYGKLSGREIEDQIDNAAGRLKTN 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +K  KKN  DF LWK+S   E  + SPWG GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 175 QKESKKNSLDFALWKKSNSGEVSYSSPWGNGRPGWHIECSAMVKQELGESIDIHLGGSDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS   +  E  A  W+HNG +N+ G KMSKS GNF TI  LLE       
Sbjct: 235 IFPHHENEIAQSEACNGKE-LAKYWLHNGMVNVGGEKMSKSLGNFTTIRSLLE------E 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------------------------EILLS 335
                 +R  +L T+YR+P+DFT + L  A                         EI L 
Sbjct: 288 DISPMTLRFFVLQTNYRKPLDFTEEALKAASKGWERLNNCLSFGYIYKIKDQSKNEIFLD 347

Query: 336 KWPQTSTSKGIIDPAVLSALY-------NDLNTVSAIQALHKLAR--------------E 374
           K P   ++   +D      L        +DLNT  A+  L +L++               
Sbjct: 348 K-PIKKSANTKLDKNSFKLLSDFEKYMDDDLNTSGALSILFELSQPIRKIINFLKEKDIN 406

Query: 375 STKNHDLLPIFN------ASAHILGIEV--CKEHLNKNISI---AIEKLVQERLILLKMK 423
                +L  +FN        A +LG++V   +E    N  +    IE+L++ R +    K
Sbjct: 407 EVDQDELNQVFNKWELLSELAGVLGLKVNLNQEKPKNNPELDTNKIEELIKNRSLAKANK 466

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            F  AD IR  L++ G  L      D  + +T WKQ
Sbjct: 467 DFLLADKIRADLKNIGIDL-----IDKPKGVTEWKQ 497


>gi|88855742|ref|ZP_01130405.1| cysteinyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815066|gb|EAR24925.1| cysteinyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 476

 Score =  275 bits (704), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 172/477 (36%), Positives = 246/477 (51%), Gaps = 50/477 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T    + + +  +   + +YVCGPTV    HIG+ R  +V+D+  R L Y   + 
Sbjct: 3   IRLYDTRSASLVDLKPREAGKVGIYVCGPTVQAAPHIGHLRSALVYDIWRRWLTYRGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT VRN+TDIDDKI+ +A  +  +    +    +  +   +F      L  L PT++PR
Sbjct: 62  -VTLVRNVTDIDDKILNQA-VDAAAEGSAEQWWALAYRIELEFTAGYNELGILPPTYEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT +I +M  LI ++I  GHAY A   + ++ FDT S P YG  +R+K+D+         
Sbjct: 120 ATANISEMRELIASLIERGHAYAAADDSGDVYFDTQSWPTYGELTRQKLDDMVAAADADP 179

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++  DF LWK S P EP    W SPWG GRPGWHIECSAMS  YLG  FDIHGGGL
Sbjct: 180 R-AKRDSRDFALWKGSKPTEPTSASWSSPWGDGRPGWHIECSAMSRRYLGSGFDIHGGGL 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS      +  A  W+HNG +N+ G+KMSKS GN +   ELL+  +  
Sbjct: 239 DLRFPHHENELAQSSALG--DDFAQHWVHNGMVNVNGQKMSKSLGNSVFARELLDAAR-- 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK----------- 344
                  V+R  +   HYR  ID+T   L EAE    +   + + +T +           
Sbjct: 295 -----PIVVRYLLGAAHYRSTIDYTDNSLAEAEAAFERLEVFIERATRRLRDTRFDVANI 349

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNAS------AHILGIE 395
             +  A   A+ +DL    A+  +H   R    +  + DL  +  A       A +LGI 
Sbjct: 350 NEVPEAFGEAMDDDLAVPQALAVVHDTIRAGNAALDDGDLAAVATARSQVVAMAQVLGIN 409

Query: 396 VC--------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      E     +S  +EKL+++R      K F+ AD IR +L + G  +ED
Sbjct: 410 PLDPRWGSERSEPAVAALSALVEKLIEDRNTARSAKDFAVADRIRDELSAAGITVED 466


>gi|295396934|ref|ZP_06807057.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974827|gb|EFG50531.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 473

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 166/493 (33%), Positives = 247/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  +  EF+ + P +I MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   LKIYNTLTNQKEEFKPLVPGSISMYVCGPTVYNYIHIGNARSTVAFDTVRRYFEYRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA +E  + P       I  K  + F +DT  L     T  PR
Sbjct: 61  -VKYVSNFTDVDDKIINRANEEGLT-P-----EQIADKYIEAFYEDTDALNVKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
              ++  +I  + +++    AY  + ++ + T     YG  S + ID+ + G        
Sbjct: 114 VVENMDDIIQFVADLVDKDFAYVVDGDVYYRTRKFEKYGQLSDQNIDDLRAGASERLEAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++  DF LWK + P E  W SPWG GRPGWHIECS M++  LG   DIH GG DL
Sbjct: 174 SQSKKEDVVDFALWKSAKPGEISWTSPWGEGRPGWHIECSVMATKLLGDTLDIHAGGHDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A      AN W+HNGF+ +  +  KMSKS GNF+  ++L+      
Sbjct: 234 TFPHHENEIAQS-EAHTGHTFANYWMHNGFVTMGDDDEKMSKSLGNFVLAHDLM------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQ---------------------RLTEAEILLSKW 337
            +     V+R  +   HYR P+ F  +                     R  +A+  L   
Sbjct: 287 -KQVDPQVVRFFLASAHYRSPLRFNEENIQDATNNLNNLKTAYANLNYRFEDAKAQLDND 345

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE----STKNHDLLPI-------FN 386
            +       ++   + A+ +D+NT + +  +++L R+    + +    +P+       F 
Sbjct: 346 AEVLAQIKALENEFIEAMDDDVNTPNGLTVVYRLMRDMNVYTNQKEVSIPVLEAFKESFT 405

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+ +  E   + ++  I+ L+ ER      K F+ AD IR QL+++G IL+D  
Sbjct: 406 ALLTIFGVTLSDEQ--ELLADDIQALIDERNQARADKNFARADEIRDQLKAEGIILDD-- 461

Query: 447 NPDNGQRMTRWKQ 459
                 + TRWK+
Sbjct: 462 ----TAQGTRWKR 470


>gi|124026295|ref|YP_001015411.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|171769740|sp|A2C3T6|SYC_PROM1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123961363|gb|ABM76146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 500

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 187/516 (36%), Positives = 259/516 (50%), Gaps = 82/516 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K  NTL +K  +F +I+P+ +++Y CG TVYD  H+G+AR  + +DVL R L +   E 
Sbjct: 3   LKFTNTLSKKKEDFISINPNQVKIYCCGVTVYDLCHLGHARSYLNWDVLRRFLIWKGFE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII RA +E  S         ++ +N  +F KD   L+ L PT  PR
Sbjct: 62  -VKFVQNFTDIDDKIINRANKEGCST------DELSERNIDEFHKDMDTLSILRPTSMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  + Q+I  I+ +     AY +N ++ F  +   NYG  S R+I+ Q        +  
Sbjct: 115 ATKCLHQIINFIEELEQKKVAYSSNGDVYFSVNKHKNYGKLSGREIENQIDNAAGRLKTN 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +K  KKN  DF LWK+S   E  + SPWG GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 175 QKESKKNSLDFALWKKSNSGEVSYSSPWGNGRPGWHIECSAMVKQELGESIDIHLGGSDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS   +  E  A  W+HNG +N+ G KMSKS GNF TI  LLE       
Sbjct: 235 IFPHHENEIAQSEACNGKE-LAKYWLHNGMVNVGGEKMSKSLGNFTTIRSLLE------E 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------------------------EILLS 335
                 +R  +L T+YR+P+DFT + L  A                         EI+L 
Sbjct: 288 GISPMTLRFFVLQTNYRKPLDFTQEALKAASKGWERLNNCLSFGYIYKIKDQAKNEIILD 347

Query: 336 KWPQTSTSKGIIDPAVLSALY-------NDLNTVSAIQALHKLARESTKNHDLL------ 382
           K P   ++   +D      L        +DLNT  A+  L +L++   K  + L      
Sbjct: 348 K-PIKKSANTNLDKESFKLLSDFERYMDDDLNTSGALSILFELSQPIRKIINFLKEKDIN 406

Query: 383 --------------PIFNASAHILGIEVCKEHLN-KN----ISIAIEKLVQERLILLKMK 423
                          + +  A +LG++V   H N KN     +  IE+L+++R +    K
Sbjct: 407 EVDQDELNQVFYKWELLSELAAVLGLKVNLNHENPKNNPELDTNKIEELIKKRSLAKANK 466

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            F  AD IR   ++ G  L      D  + +T WKQ
Sbjct: 467 DFLLADKIRDDFKNIGIDL-----IDKPKGVTEWKQ 497


>gi|332708902|ref|ZP_08428873.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352444|gb|EGJ32013.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 494

 Score =  275 bits (704), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 175/510 (34%), Positives = 250/510 (49%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ ++   +RMY CG TVYD  H+G+AR  IV+D     L++   + 
Sbjct: 3   LNLYNTLTRRKESFEPLETGKVRMYCCGITVYDLCHLGHARTCIVWDTARHYLQWRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RAR+E  S+        ++ +    + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRARREGTSM------EAVSERFIDAYFEDMARLNVQEANAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT+ +  +  L+  +   G+AYEA+ ++ +       YG  S RK+++ + G      V 
Sbjct: 115 ATHSLDGIKRLVCELEQKGYAYEADGDVYYSVRRFEEYGKLSGRKLEDLQAGASGRVDVA 174

Query: 181 EKY--HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +     KK+P DF +WK + P EP WESPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DSVGPKKKDPFDFAVWKSAKPEEPSWESPWGPGRPGWHIECSAMVRDMLGETIDIHTGGS 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNF TI +LL+     
Sbjct: 235 DLVFPHHENEIAQSEAVTG-KSLARYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-----------------ILLSKWPQTS 341
            R      +RL +LM  YR+PIDFT   +  A                  I L    Q++
Sbjct: 289 -RPVDPMAVRLFVLMAQYRKPIDFTDDAIASATNGWQTLKEGLLFGHNYGIQLGWQDQSA 347

Query: 342 T-----------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-- 388
           T           S   I      A+ +DLN    +  L ++A+   +  ++L     +  
Sbjct: 348 TPKPSQPLQDDLSNKTIAQQFQEAVDDDLNFAGGLAVLFEVAKGLRREGNILVHQGKTET 407

Query: 389 ---------------AHILGIEVCKEHLNKNISI------AIEKLVQERLILLKMKKFSS 427
                          A +LG+E   E     +S        IE L+Q+R    K K F  
Sbjct: 408 PASELEQQWRSLVELAEVLGLEAQPEE-EAEVSTDGLSDGEIEALIQQRAEARKTKNFEL 466

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +D IR  L+++G  L      D G  +T W
Sbjct: 467 SDRIRDDLQAQGITL-----IDQGGGVTTW 491


>gi|227876791|ref|ZP_03994900.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227842688|gb|EEJ52888.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 538

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/341 (41%), Positives = 200/341 (58%), Gaps = 26/341 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ ++   + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLNTGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGLPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
           AT HIPQ I L+Q ++  GHAY +    + F   S+P+YGS + +++      E      
Sbjct: 113 ATGHIPQQIALVQRLLDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGW--GFARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDK 324


>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 491

 Score =  275 bits (704), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 130/252 (51%), Positives = 170/252 (67%), Gaps = 8/252 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y   E
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        DA+S+ +S+   +F +D   L CL PTH+P
Sbjct: 81  --VNYVRNFTDIDDKIIKRANEAG-----EDALSL-SSRFIDEFHRDMYELQCLPPTHEP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI Q+I LI  I+ +G AY    ++ F   + P+Y S S RK+D+ + GTRV    
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252

Query: 244 HHENEIAQSCCA 255
           HHENE+AQS  A
Sbjct: 253 HHENELAQSQAA 264


>gi|313896271|ref|ZP_07829824.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975070|gb|EFR40532.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 475

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 172/483 (35%), Positives = 248/483 (51%), Gaps = 62/483 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGE 63
           + +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L R  Y  
Sbjct: 2   LTVYNTMTRKKEEFHPLKEGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLARKGY-- 59

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y++N TD+DDKII  A +   +         I+ +    +      L        P
Sbjct: 60  -RVRYIQNFTDVDDKIINAANRAGVTW------KEISDRYIAAYFTAMDALNVHRADVFP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R +  +  +I ++  +I  G+AY  +  ++ +      +YG  S R +D+ + G RV   
Sbjct: 113 RVSETMEDIIRMVGTLIARGYAYATSEGDVYYSVEKFAHYGRLSGRSLDDMEAGARVEIN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIF
Sbjct: 173 ETKRHPMDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIF 232

Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENEIAQ+  C D  EK A  W+HNGF+ ++  KMSKS  NF T+ ++L       + 
Sbjct: 233 PHHENEIAQAEPCIDGHEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPAVL-- 352
           +P  VIR  +L THYR P+DF+ +RL EAE  L++   T       S  +G  D A    
Sbjct: 286 FPGEVIRFFILQTHYRSPLDFSDERLREAEAALARLAHTKEVVDELSGREGTADTAAALV 345

Query: 353 -----------SALYNDLNTVSAIQALHKLARESTKNHDLLP---------------IFN 386
                      +A+ +D NT  A+  +  L++E  +    L                 + 
Sbjct: 346 AQAKDFLTAFDAAMDDDFNTALALSQMFGLSKEINRYRQELEHGTAFDAAHFAEAADAYR 405

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK-----MKKFSSADYIRKQLESKGFI 441
             A I+GI    E     +   +   + E +I L+      K ++ AD IR +L+ +G +
Sbjct: 406 TMAEIIGI---FEQEPAAVEGGLADGLMEIIIALRQDARVQKNWALADRIRDELKERGVV 462

Query: 442 LED 444
           LED
Sbjct: 463 LED 465


>gi|223982635|ref|ZP_03632869.1| hypothetical protein HOLDEFILI_00143 [Holdemania filiformis DSM
           12042]
 gi|223965415|gb|EEF69693.1| hypothetical protein HOLDEFILI_00143 [Holdemania filiformis DSM
           12042]
          Length = 478

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 143/334 (42%), Positives = 201/334 (60%), Gaps = 21/334 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL  KI EF+ + P+ + MYVCGPTVY+ AHIGNARP+IVFD L RL        
Sbjct: 37  IRLYNTLSGKIEEFKPMKPNEVSMYVCGPTVYNHAHIGNARPIIVFDTLRRLFEAQ--GY 94

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF--VKDTTRLACLAPTHQ 122
            V YV N TD+DDKII++A +E      N A  +++++  + +  V+D+     L  T  
Sbjct: 95  TVKYVSNYTDVDDKIIKKAHEE------NVAEGVVSARYIEAYQKVRDSLNTEPLFAT-- 146

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  + ++I+ I  ++  GHAY+   ++ F   S+P+YGSFS++ +++ ++G R+ E 
Sbjct: 147 PRVTETMDEIIHFIDELVKTGHAYQVGGDVYFRVGSVPSYGSFSKQNLEDLQVGARIEEN 206

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK  T M   W+SPWG GRPGWH EC  M     G   DIHGGG+DL F
Sbjct: 207 TKKENPLDFALWKE-TDMGIKWQSPWGEGRPGWHTECVVMIHKEFGDQIDIHGGGMDLRF 265

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS         A+ W+HN  +N+ G KMSKS GN     +++E  K G    
Sbjct: 266 PHHENEVAQSQALFH-NSIAHYWLHNAMININGEKMSKSLGNVSWAKDVIE--KLG---- 318

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
            A ++R  ML  HYR  ++F+ + +  A   L K
Sbjct: 319 -ADLVRWLMLSVHYRGELNFSDETIETARKELDK 351


>gi|288560827|ref|YP_003424313.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
 gi|288543537|gb|ADC47421.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
          Length = 480

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 174/496 (35%), Positives = 256/496 (51%), Gaps = 78/496 (15%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+  E   +    I+++VCGPTVYD AHIG+ R  I FD + R L +      V Y++
Sbjct: 1   MTREKGELNTLFADKIKLFVCGPTVYDDAHIGHGRTYISFDTIKRYLEF--KGYSVFYLQ 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           NITDIDDKII RA++             +  K  ++F++D   L   +  +  RAT+HI 
Sbjct: 59  NITDIDDKIINRAKESGIDS------KYLAEKFEKRFIEDMAALNVTSVNYFARATDHIE 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           +++  IQ +I  G+AY     + F+ +   +YG  S RK+++ +   R+     KK+P D
Sbjct: 113 EILDQIQRLIDKGYAYVTETGVYFEVAKFEDYGKLSNRKLEDLET-HRIDIDSSKKSPHD 171

Query: 191 FILWK-RSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           F LWK R  P    EP W+SPWG+GRPGWHIE +A++  Y G  +DIHGGGLDLIFPHH+
Sbjct: 172 FALWKNREAPEYAGEPVWDSPWGKGRPGWHIEDTAITEKYFGPQYDIHGGGLDLIFPHHD 231

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           +EIAQ       E     W+H GFLN+ G KMSKS GNFITI ELL       + +    
Sbjct: 232 SEIAQMEAVSGKEPLVQYWMHTGFLNVSGEKMSKSLGNFITIRELL-------KEYSGDT 284

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIID--- 348
            RL +L+THYR PIDF+   L +AE  +S+               + + + S+ ++    
Sbjct: 285 FRLFVLLTHYRSPIDFSEVSLHQAERNVSRIKNYLENLDEKINDIFEKGNLSEDLLKLAE 344

Query: 349 --------------------PAV-------LSALYNDLNTVSAIQALHKLARESTKN--- 378
                               PA+        +++ +D +T  AI A+    ++S K+   
Sbjct: 345 LEENEFDEELINFDYFKSNYPALKEGVNEFFTSMDDDFSTPKAIAAIFSFIKQSNKDLEE 404

Query: 379 -----HDLLPI---FNASAHILGIE--VCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
                 DLL I   F   + ILGI+  V K+  + N +  ++ +   RL L   KK+  +
Sbjct: 405 DDLIIDDLLAIKHWFKDISQILGIDFFVYKDETSGNEAELLDIIADVRLKLRAEKKYDLS 464

Query: 429 DYIRKQLESKGFILED 444
           D IR +L S G  + D
Sbjct: 465 DEIRDKLISLGIEVSD 480


>gi|313157407|gb|EFR56830.1| cysteine--tRNA ligase [Alistipes sp. HGB5]
          Length = 491

 Score =  275 bits (703), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 177/493 (35%), Positives = 265/493 (53%), Gaps = 55/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ +YNTL R+  EF+ + P  + MYVCGPTVY   H+G+ARP + FD+L+R L+  
Sbjct: 1   MESKLVLYNTLTRRKEEFEPLTPGRVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLKAC 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +    T+++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VAHYYTERYHRA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L    P+ +P A+ HI + I  ++ I+  G AYE+N  + FD        NYG  S 
Sbjct: 113 MEALNVETPSIEPYASGHIIEQIEFVKKILADGFAYESNGSVYFDVEKYNRKYNYGRLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K++  DF LWK+++P     W SPW  G PGWH+ECSAMS+ 
Sbjct: 173 RNLDDIVANTRELDGQSDKRHSYDFALWKKASPEHIMRWPSPWSEGFPGWHMECSAMSTR 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQS  A     +A  W+HN  + + G+KM KS GNF
Sbjct: 233 YLGERFDIHGGGMDLMFPHHECEIAQSTAA-LGHDSARYWVHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ EL   + K   +++    IR  +L   YR  +DF+ + L  AE  L +  +   + 
Sbjct: 292 ITLEELFTGSHKLLAQAYSPMTIRFFVLQAQYRSTLDFSNEALQAAEKGLDRLMKGVEAL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQAL-------HKLA--RESTKNHDL- 381
           G I PA +S             A+ +DLN+   I AL       ++LA  R++    DL 
Sbjct: 352 GRIKPADVSTVNPAELEERCRAAMDDDLNSPMVISALFDWVRVINQLAEGRQTITAADLE 411

Query: 382 ---LPIFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                +   +  ILG+   K   + +    ++  +E L+ ERL     K ++++D IR  
Sbjct: 412 TLKTTVRRYAFDILGLRDEKAAGSASGRDYVTPLVEMLLDERLKARAAKDWAASDRIRDG 471

Query: 435 LESKGFILEDYKN 447
           L + G  ++D K+
Sbjct: 472 LAAAGIRVKDRKD 484


>gi|299782847|gb|ADJ40845.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 473

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 165/484 (34%), Positives = 249/484 (51%), Gaps = 68/484 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF       + MYVCGPTVY++ HIGNAR ++ FD + R L +     
Sbjct: 2   LKIYNTLTRQKEEFHPQQAGIVNMYVCGPTVYNYIHIGNARSVVAFDTVRRYLEF--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A+++  ++P       +  K  Q +++DT  L     T  PR
Sbjct: 60  QVNYVSNFTDVDDKMIKAAKEQGITVPE------LAYKYIQAYMEDTAALNVEPATTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I  +I  I+++I  G+AY++  ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENIDGIISFIEDLIEKGYAYQSGGDVYYRARKFAHYGQLSGQSLDDLEVGASEHVSTE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGR-GRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K +P DF LWK + P E  W+SP G  G PGWHIECS MS+ YLG   DIH GG D
Sbjct: 174 EVAKKXDPLDFALWKAAKPGEIKWDSPVGGPGAPGWHIECSVMSTKYLGDTLDIHAGGQD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS  A    +  N W+HNGF+ +  +  KMSKS GNF+T+++L+     
Sbjct: 234 LEFPHHENEIAQS-EAKTGHRFVNYWMHNGFVTIGRDNEKMSKSLGNFVTVHDLI----- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------------KWPQTSTSK 344
             +     V+R  M  T YR PI ++ + L EA+  L              K   + T  
Sbjct: 288 --KEVDPQVLRFFMSTTQYRRPIQYSQESLVEAQANLEHLKNTYDNLAYRLKDATSGTDG 345

Query: 345 GI------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------ 380
           G+           ++A+ +D+N  + I  +++L R + +  +                  
Sbjct: 346 GVQRQLADFRARFVAAMDDDINVQNGIAVVYELMRFANQYVEQRLVQREPIVAIQLMLKR 405

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           L+ +F     +   E+  E         I++L+++R      K F+ +D IR QL  +G 
Sbjct: 406 LVAVFGVDLAVSATEINDEK--------IKELIEKRNAARAEKDFALSDQIRDQLRDQGI 457

Query: 441 ILED 444
           ILED
Sbjct: 458 ILED 461


>gi|111021434|ref|YP_704406.1| cysteinyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123340129|sp|Q0S888|SYC_RHOSR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110820964|gb|ABG96248.1| cysteine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 464

 Score =  275 bits (702), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 159/471 (33%), Positives = 241/471 (51%), Gaps = 47/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L  +  + 
Sbjct: 3   LRLFDTETRALRDFVPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWLLAH--DY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDI+DKI+ +A +     P  +  +      T  +     +L  L P+ +PR
Sbjct: 61  DVAFVRNVTDIEDKILNKAAE--AGRPWWEWAATFERSFTWAY----QQLGVLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ ++Q +I +GHAY A  ++ FD  S P YGS S  K+D+   G    E   
Sbjct: 115 ATGHITQMVEMMQRLIDNGHAYAAGGDVYFDVRSYPRYGSLSGHKLDDVHQGESAGEC-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GGLDL+FPH
Sbjct: 173 KRDPRDFTLWKAEKPGEPSWPTPWGRGRPGWHLECSAMAEFYLGAAFDIHCGGLDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA   +  A  W+HNG++ + G KMSKS GN +++  +L+  +        
Sbjct: 233 HENEIAQAKCAG--DDFAQYWLHNGWVTMGGEKMSKSLGNVLSVPNVLKKVR-------P 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSKWPQTSTSKGIIDPAVLSAL 355
             +R  +   HYR  ++++   L E           +L ++        G+   A   AL
Sbjct: 284 QELRYYLGSAHYRSMLEYSDTALDEGAAAFRRIESFVLRTQERAGEVPVGLWTEAFARAL 343

Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN-- 404
            +DL   +A+  +H   RE     D         +     A   ILG++   EH  +   
Sbjct: 344 DDDLAVPAALAEVHGKVREGNIALDGGDLEGARGIASQVRAMLGILGVDPLDEHWTQETA 403

Query: 405 --------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                   + + +   ++ R      K ++ AD +R +L   G  + D  N
Sbjct: 404 DASAATDALDVLVRAELERRQSARAEKNWAVADEVRDRLIRAGIEVTDTPN 454


>gi|262200969|ref|YP_003272177.1| cysteinyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262084316|gb|ACY20284.1| cysteinyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 463

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/475 (33%), Positives = 242/475 (50%), Gaps = 48/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R++ +F  + P    +Y+CG TV    HIG+ R  I FD+L R L +  G  
Sbjct: 3   LRLYDTATREVRDFVPLHPGRASVYLCGATVQGVPHIGHVRSGIAFDILRRWLAH--GGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDI+DKI+ +A +     P  +      + + ++F      L  L P+ +PR
Sbjct: 61  DVLFVRNVTDIEDKILRKAAEA--GRPWWE----WAATHEREFTDAYDALGVLPPSGEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I QM+  +  +I  GHAY A+  + FD  S+P+YG+ S  K+D+   G        
Sbjct: 115 ATGFITQMVEYMDRLIERGHAYAADGNVYFDVRSLPDYGALSGHKLDDVHQGESAGTG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++  LG  FDIH GG+DLIFPH
Sbjct: 173 KRDPRDFTLWKAAKPDEPSWPTPWGPGRPGWHLECSAMATALLGPEFDIHCGGMDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN + I  +L+  +       A
Sbjct: 233 HENEIAQAHGAG--DPFARYWLHNGWVTMGGEKMSKSLGNVVAIPAMLQRVR-------A 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQ--TSTSKGIIDPAVLSAL 355
             +R  +   HYR  ++++   LTEA       E  L +        + G IDP    AL
Sbjct: 284 VELRYYLGSAHYRSMLEYSDGALTEAAAGYRRVESFLQRVVARVGEVAIGEIDPEFGVAL 343

Query: 356 YNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEH------ 400
            +DL   +A+  +H + R         +            A   +LG++   EH      
Sbjct: 344 DDDLGVPAALAVVHNVVRHGNTALESGDGAAALAAASSVRAMMGVLGVDPLDEHWATAGD 403

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                  + + +   +Q R      K +++AD +R +L   G  + D   PD  Q
Sbjct: 404 DSAATSALDVLVRAELQRRADARAAKDWATADGVRDRLAQAGVEVTD--TPDGAQ 456


>gi|225873812|ref|YP_002755271.1| cysteine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225791240|gb|ACO31330.1| cysteine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 491

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 185/511 (36%), Positives = 250/511 (48%), Gaps = 76/511 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL  +I      D    RMY CGPTVYD+ HIGN R     DVL R L+      
Sbjct: 2   IRLFNTLSGQIEALTPADGQTFRMYACGPTVYDYGHIGNFRTFCHVDVLRRALQLE--GI 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+DDKII  A +    +PI +     T K  Q F +D   L    P    R
Sbjct: 60  TVRHVMNVTDVDDKIIRNATR--AGVPIAE----YTKKYEQAFFEDLHALGVAEPEVIAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT HIP M+ LI+ +     AY+  +    F  +   +YG  S++ +     G RV  ++
Sbjct: 114 ATEHIPAMVKLIEQLAAQDIAYKTEDGSWYFRIARFKDYGKLSKKDLTGISDGARVDVDE 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K +  DF LWK   P E  WE+P G GRPGWHIECSAM+  YLG+  D+HGGG DL+F
Sbjct: 174 YEKDSARDFALWKSPKPGEHFWETPLGAGRPGWHIECSAMAMEYLGESIDLHGGGEDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  A  W H  FL +EGRKMSKS GNF T+ +LL       + +
Sbjct: 234 PHHENEIAQSECASH-KTFARHWFHVRFLLVEGRKMSKSEGNFYTLRDLLL------KGY 286

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRL-TEAEILLSKWPQT------STSKG 345
            A  IR+ ++   YR+ ++FT          V+RL T  + +L+  P T      ST   
Sbjct: 287 KASAIRMLLISVPYRQQLNFTFEGLAAETTAVERLRTFYQRMLTVTPATEKNAALSTETE 346

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARE----------STKN--------HDLLPIFN- 386
                  + L NDLNT  A  A+  L R           ST+N         +   +FN 
Sbjct: 347 KARKEFRAGLENDLNTAEARAAIFDLVRAGNAAADAGTLSTENVAEILAVLREFDSVFNV 406

Query: 387 -----ASAHILGIEVCKEHLNKNISI------------AIEKLVQERLILLKMKKFSSAD 429
                A+     +E  ++    N +              I+ LV ER    + + F+ AD
Sbjct: 407 LEDRDAAITKFALEWAEQEGRLNEAAHEVLAQRGLSDEQIQALVDERTKAKRARNFARAD 466

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L  KG ++ED K         RWK+K
Sbjct: 467 QIRNELAEKGIVIEDSKEG------VRWKRK 491


>gi|206602428|gb|EDZ38909.1| Cysteinyl-tRNA synthetase, class Ia [Leptospirillum sp. Group II
           '5-way CG']
          Length = 490

 Score =  275 bits (702), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 181/484 (37%), Positives = 249/484 (51%), Gaps = 51/484 (10%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           NTL +K        P  + MYVCG TVYD  H+G+AR   VFD+L+RLL    G + V Y
Sbjct: 21  NTLTQKTELLSPRIPGEVTMYVCGVTVYDDCHLGHARSQTVFDLLHRLL-LRLGYR-VRY 78

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           VRNITDIDDKII +A++          I+ IT      F +D  RL  L P  +PRAT +
Sbjct: 79  VRNITDIDDKIIRKAQE------TGRTITEITDIYIDSFQRDMRRLGILPPDKEPRATLY 132

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           +  MI LI  ++  G AY+  N++ F       YG  S +K+DE + G R+     K++P
Sbjct: 133 LDPMIRLIGTLLDKGFAYKKGNDVYFRVRKYGAYGELSHQKLDELQSGARIAADEEKEDP 192

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            DF LWK +   EP + + +G GRPGWHIECSAMS   LG+  DIHGGG+DL+FPHHENE
Sbjct: 193 LDFALWKGAKTGEPSYPAFFGEGRPGWHIECSAMSLSELGETIDIHGGGMDLMFPHHENE 252

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG---GRSWPAP 305
            AQS  A   ++   IWIHNGF+ L   KMSKS GN   I    ET  F     R W   
Sbjct: 253 RAQSESATG-KRFVGIWIHNGFVTLNEEKMSKSLGNIFRIRTFFETSPFPEGVTREW--- 308

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSALY 356
            +R  +L THY  P+D T + L  A+  L                  +G +    L+AL 
Sbjct: 309 -LRAFLLSTHYASPVDLTDENLAHAKNALDSLYLFKDRLDSMFGEAREGPMTQEFLAALC 367

Query: 357 NDLNTVSAIQALHKLAR------------ESTKNHDLLPIFNASAHILGIEVC------- 397
           +D++T  A + LH+               E  +  D+  +F  +   LGI          
Sbjct: 368 HDMDTPVAFRILHEAKNTLNPLLGALGDVEEDRLSDVRALFEVAKKTLGILTLPASEWIY 427

Query: 398 --KEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
              E   +  S+    +++LV ER    + K ++ AD IR++L+  G++LED  NP    
Sbjct: 428 GKGEKTGRAESLPPEEVDRLVLEREKARREKDYARADAIRERLKKAGYLLED--NPGGLP 485

Query: 453 RMTR 456
           R+ +
Sbjct: 486 RIRK 489


>gi|256397251|ref|YP_003118815.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363477|gb|ACU76974.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 470

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/474 (33%), Positives = 241/474 (50%), Gaps = 51/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R   EF  + P  + +Y+CG TV    HIG+ R  + FD+  R L Y     
Sbjct: 3   LRLYDTAARATREFVPVTPGKVSIYLCGATVQAPPHIGHIRSGVSFDIARRWLEYR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII +A ++            +   N   F +    L C  P+ +PR
Sbjct: 61  AVTFVRNVTDIDDKIIRKAAEQKVET------WRVAQANEYAFQQAYRLLGCEDPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEK 182
           AT HIP+M+ ++  +I  GHAY A  ++ F   S+P YG+ +   +D  E++    V   
Sbjct: 115 ATGHIPEMVAMMHKLIYDGHAYAAGGDVYFRVRSLPAYGALAHFSVDDLEEQPAEDVAPT 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++P DF LWK S P EP W++PWG GRPGWH+ECSAM+  YLG  FDIHGGG+DLIF
Sbjct: 175 THKEDPHDFALWKASKPGEPFWDTPWGPGRPGWHLECSAMAHRYLGTNFDIHGGGVDLIF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS      +K  N W+HNG++ L+  KMSKS GN + + EL        + +
Sbjct: 235 PHHENEQAQSHAFG--DKFTNYWMHNGWVTLKNEKMSKSLGNSVLVTEL-------AKQY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPA---------VL 352
              V+R  +   HYR  I++T   L EA+   S+     T +   + P            
Sbjct: 286 RPVVMRYYLGTPHYRSMIEYTEDSLREADAAYSRIEGFVTRALETVGPTEAAARVPAAFA 345

Query: 353 SALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASA----HILGIEVCKE---- 399
            ++ +D     A+  L+   RE     +  + + +    AS      ILG+    E    
Sbjct: 346 ESMDDDFGVPGAVAVLYTTVREGNTALAGGDKEGVATHLASVLRMLDILGLNPLAEPWAG 405

Query: 400 ---------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                     L   +   ++  +++R    + K ++++D IR +L   G  +ED
Sbjct: 406 ADGAAGSGTDLRPVVDALVKVALEQRQAARERKDYAASDAIRDRLSQAGVTVED 459


>gi|148239954|ref|YP_001225341.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|187631643|sp|A5GM79|SYC_SYNPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|147848493|emb|CAK24044.1| Cysteinyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 499

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 179/504 (35%), Positives = 247/504 (49%), Gaps = 76/504 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++  NTL R+   FQ +    + +Y CG TVYD  H+G+AR  I +DVL R L   
Sbjct: 1   MPVSLRFTNTLTRRTEPFQPLKDGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYL--I 58

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    VT+V+N TDIDDKI++RA +E  S+        ++ +N   F  D   L  L P 
Sbjct: 59  WSGYAVTFVQNFTDIDDKILKRAAEEGSSM------EAVSERNIDAFHADMDALGILRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
             PRAT  +  +  LI  +   G AY A+ ++ F       YG  S R + +Q+     R
Sbjct: 113 RMPRATRCLEGIRTLIAELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLADQQTNADGR 172

Query: 179 VP--EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           V   E+  K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH G
Sbjct: 173 VADAEEARKQHPFDFALWKGAKAGEPSFPSPWGNGRPGWHIECSAMVREELGDTIDIHLG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS  A   ++ A +W+HNG +N+ G KMSKS GNF TI  LLE+  
Sbjct: 233 GADLVFPHHENEIAQSEAATG-QELARVWLHNGMVNVGGEKMSKSLGNFTTIRALLES-- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---- 352
                  A  +RL +L  HYR+P+DFT + L EA     K    + S G +    L    
Sbjct: 290 ----GLSAMTLRLFVLQAHYRKPLDFTAEAL-EAATTGWKGLNAALSLGDLHAEALGWTP 344

Query: 353 ----------------------------SALYNDLNTVSAIQALHKLA-----------R 373
                                       +A+ +DLN+  A+  L +LA           R
Sbjct: 345 AEPMGNDAVVASESSAIDTLLSARQRFSAAMDDDLNSSGALAVLFELARPLRALANRLDR 404

Query: 374 ESTKNH------DLLP---IFNASAHILGIEV----CKEHLNKNISIAIEKLVQERLILL 420
               NH      +LL    +    A +LG+ +      E  +   S +IE  +  R +  
Sbjct: 405 GDAPNHNDDDGQELLQRWLLLRELAAVLGLRLEHPSAPEEESDLDSQSIEAAIDARRLAK 464

Query: 421 KMKKFSSADYIRKQLESKGFILED 444
           + K F+ AD IR +L ++G  L D
Sbjct: 465 QSKDFAEADRIRAELSAQGIELID 488


>gi|227432961|ref|ZP_03914903.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351307|gb|EEJ41591.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 468

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 173/477 (36%), Positives = 246/477 (51%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I    I+MYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IYVYNTLSREKEVFKPITAGKIKMYVCGPTVYNYIHIGNARSAIAFDTVRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA++E  S         + +K    F +DT  L     T + R
Sbjct: 61  -VNYVSNFTDVDDKIINRAQEEGISELE------VANKYADAFDEDTLPLNIKPATVRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP++I  ++++I  G+AYE+  ++ F       YG  + + + E +          
Sbjct: 114 ATEVIPEIIEFVKDLIDKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLNDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEP--GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           E   K++P DF +WK + P E    W SPWG GRPGWHIECS M+  YL    DIHGGG+
Sbjct: 174 ETIRKEDPIDFAVWK-NEPREGVISWSSPWGNGRPGWHIECSVMAQKYLSNTIDIHGGGI 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHH NEIAQS  A   +K  N W+HNGF+N+   KMSKS GNF T++++L T    
Sbjct: 233 DLAFPHHTNEIAQS-EARTGQKFVNYWMHNGFVNVNNEKMSKSLGNFTTLHDMLAT---- 287

Query: 299 GRSWPAP-VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGII 347
              +  P VIR  +  T YR PI++    L +A + L +            +TS   G  
Sbjct: 288 ---YDDPMVIRYLLTTTQYRRPINYEASTLEQARLELERIRTAYRNLMFRAETSEPGGNE 344

Query: 348 DPAVL---------SALYNDLNTVSAIQALHKLA--------RESTKNHDLLPIFNASAH 390
           D   L          A+ +D NT +A+ A+ +L         R + K   +  +    A 
Sbjct: 345 DVETLIEVQKKAFDQAMDDDFNTPNALAAIFELVSIGNTYTERNTVKVDTVQHLLGTMAD 404

Query: 391 IL---GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L   GIE      N+ ++    +L+ +R++  +   F  +D +R QL+  G  +ED
Sbjct: 405 LLSVFGIEGLDG--NEELTTKQRELLDKRVLARESHDFEESDLLRNQLKEVGIFVED 459


>gi|320527638|ref|ZP_08028812.1| cysteinyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131959|gb|EFW24515.1| cysteinyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 444

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 166/464 (35%), Positives = 244/464 (52%), Gaps = 48/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT   +I EF+ I   ++ MYVCGPTVY++AHIGNARPMIVFDVL RL        
Sbjct: 2   IRLYNTKTLQIEEFKPIHEGHVDMYVCGPTVYNYAHIGNARPMIVFDVLKRLFEA--EGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII++A +E      N   ++I  +    + +  T L    P   PR
Sbjct: 60  SVTYVSNFTDVDDKIIKKAAEE------NTTEAVIAQRYIDAYQEVRTLLNTELPDITPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  I  ++  GHAYEAN ++ F   S+P YG  S + +D+ + G R+     
Sbjct: 114 VTETMDKIIDFIDQLVKTGHAYEANGDVYFSVESVPTYGEISHQHMDQLEAGARIETNDQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+ T M   W SPWG GRPGWH EC  M +  +G   DIHGGG+DL FPH
Sbjct: 174 KKNPYDFALWKK-TDMGIKWNSPWGEGRPGWHTECVVMINDNIGDCIDIHGGGMDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ   A      AN W+HN  +N++G+KMSKS GN +   +++        S   
Sbjct: 233 HENEAAQQ-EAMHGNTLANYWVHNAMVNIDGQKMSKSLGNTMWAKDVV-------LSLGT 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSKGIIDPAV--------- 351
            + R  +   HYR+ ++F+ + +     E + +L+   Q      + D A+         
Sbjct: 285 NLTRWLVSSVHYRKELNFSDETIETARKELDKVLTPLKQAYIKAALADNAMGDDYDKDSY 344

Query: 352 ---LSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASA----HILGIEVC 397
              L  L +D+NT +A       ++ L++  R+   +   + +++ +     ++LGI V 
Sbjct: 345 RAFLDCLDDDMNTPNAYAVIFETVKKLNQTLRQREIDFAQVALYSNAVEKMLNVLGIVVD 404

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K  + +       K  Q +      K F +AD  R +L  KG +
Sbjct: 405 KPVIGEAEKELFAKWNQAK----ADKDFDTADKYRNELAEKGLL 444


>gi|300744321|ref|ZP_07073340.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380046|gb|EFJ76610.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
          Length = 476

 Score =  274 bits (701), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 166/481 (34%), Positives = 249/481 (51%), Gaps = 59/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y++    I +F+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY  G K
Sbjct: 3   MRFYDSATSSIRDFEPVVPGEARIYYCGATVQGEPHVGHIRSALVFDQLARWMRYR-GFK 61

Query: 65  CVTYVRNITDIDDKIIERARQ--------EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            VT VRN+TDIDDKI+ ++ +        EHP    N+    +  +  + F +    L  
Sbjct: 62  -VTTVRNVTDIDDKILAKSVESAQPTYTGEHP----NEQWWALAYRYEKVFARAYATLGI 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQ 173
             PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ +D+ 
Sbjct: 117 DPPTYEPRATGHIPEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGALTRQSVDDM 176

Query: 174 KMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           +       +  K++P DF LWK      P+   W+SPWGRGRPGWH+ECSAM+  YLGK 
Sbjct: 177 QDSADADPR-GKRDPRDFALWKGYKEGEPLTAAWDSPWGRGRPGWHLECSAMAGKYLGKR 235

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  +
Sbjct: 236 FDIHGGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPVQ 293

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGII 347
           +L+  +         V+R  +   HYR  +D+    L EA + + +   +   +    + 
Sbjct: 294 MLQQAR-------PLVVRYYLGSAHYRSVLDYRPTSLEEARVAIERVEAFLAATLELMVP 346

Query: 348 DPA-------VLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILG 393
           +P           AL +D+N   A+  LH+  R             +      A A++LG
Sbjct: 347 NPQDRRVPQDFADALDDDMNIPRALAVLHEQTRAGNAALAAGADASEFANAVWAMANVLG 406

Query: 394 I----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +              EH  + +   I  ++++R      K +++AD +R  L + G  ++
Sbjct: 407 LISLMNLDGSGASGAEH--QALDALIHTILEQRASARAEKDWATADRMRDVLAAAGITVK 464

Query: 444 D 444
           D
Sbjct: 465 D 465


>gi|21672736|ref|NP_660803.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654284|sp|P46241|SYC_BUCAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21623381|gb|AAM68014.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 463

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 176/467 (37%), Positives = 254/467 (54%), Gaps = 43/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT   K   F+ I    I +YVCG TVYDF HIG+AR  +VFD++ R LR    + 
Sbjct: 2   LKIFNTATSKKEIFKPIKNKKINLYVCGVTVYDFCHIGHARTFVVFDMIVRYLRLIGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII ++ +E   I      S  T+   ++  KD + L    P  +PR
Sbjct: 61  -VKYIRNITDIDDKIILKSLKEKIDI------SAFTNIMIKEMNKDFSLLGISPPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            TN+I  +I +I+ +I + +AY   + ++IF  +S   YG+ SR+ +D+   GTR+    
Sbjct: 114 VTNYIIDIIKVIEKLIKNKNAYVNDHGDVIFSINSDKFYGTLSRQSLDKLISGTRISIDK 173

Query: 184 HKKNPADFILWKRSTPMEPG-WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKN +DFILWK+S   E   W SPWG+GRPGWHIEC+A+++ +     DIHGGG DL+F
Sbjct: 174 EKKNSSDFILWKKSKKEEKFSWNSPWGKGRPGWHIECTAITNVFFKDYIDIHGGGSDLLF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEI+QS C ++       W+H+G + ++ +KMSKS GN   + ++LE        +
Sbjct: 234 PHHENEISQSRCLNK-NFRVKFWMHSGLVIIKNQKMSKSLGNSFFLKDVLE-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA--------VLS 353
            A V+R   L THYR PI +T + L ++E+ L   +     +K I DP            
Sbjct: 286 EAEVLRFFFLSTHYRHPIYYTEENLKKSEMSLEYLYVTLYGTKPIFDPIEGVNFEIDFFE 345

Query: 354 ALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHILG--IEVCKEHLNK 403
           AL +D NT  A   L KLAR        + +K++         A  LG  +   +  L K
Sbjct: 346 ALNDDFNTPQAFSILFKLARKINYLKKIDLSKSNFFAFRLQKLAGYLGFLLNTSQYFLQK 405

Query: 404 NISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +         IE L+++R    K K +  AD +R +L     ILED
Sbjct: 406 KLPFDEEIIKKIESLIEKRNFARKSKLWKEADKLRDKLIKLNVILED 452


>gi|187479046|ref|YP_787070.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
 gi|109894885|sp|Q2KX38|SYC_BORA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115423632|emb|CAJ50172.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
          Length = 483

 Score =  274 bits (700), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 175/495 (35%), Positives = 252/495 (50%), Gaps = 54/495 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+ +    +R+YVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 2   LHIYNTLSRTKETFKPVHAGEVRIYVCGMTVYDYCHLGHARMLVAFDVVQRWLRA--SGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA Q          +  +T         D   LA   P H+PR
Sbjct: 60  AVNYVRNITDIDDKIIRRAVQ------TGRRMHEVTDYFIAAMHADERALAVERPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +MI +I  +  +G AY+A++ ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATAYVGEMIDIIGRLEKNGLAYQADDGDVNYAVRGFQGYGKLSGKSLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W+SP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 SKRDPLDFVLWKSAKEEEPPETKWDSPYGFGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK---- 296
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI + +   +    
Sbjct: 234 KFPHHENEIAQTEGA-FGGTLANIWMHCGPLMVDAEKMSKSLGNFRTIRQTIAQGEAQDG 292

Query: 297 ---FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGI-- 346
              +      A ++R  ++  HYR P ++T   L +A+  L +  Q     T    GI  
Sbjct: 293 EADYQANPREAEMLRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALANVTPDVAGIDW 352

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGI------- 394
                 A  +A+ +D N+  A+ AL +LA +  +  D        A   +LG+       
Sbjct: 353 NEAQAQAFKAAMNDDFNSSGAVAALFELAGQVNRERDSRAAGQLKALGAVLGLLQQDPAV 412

Query: 395 ----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        ++  ++  +  IE L+ ER      + F+ AD IR +L + G  L+D
Sbjct: 413 YFQSSTRYSSAGMQQGASQMDAARIEALIAERGQAKLSRDFARADAIRAELRAAGIELDD 472

Query: 445 YKNPDNGQRMTRWKQ 459
                    MT+W++
Sbjct: 473 KPGG-----MTQWRR 482


>gi|326202353|ref|ZP_08192222.1| cysteinyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987471|gb|EGD48298.1| cysteinyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 461

 Score =  274 bits (700), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 245/471 (52%), Gaps = 45/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F+ ID   +R+Y CGPTVY++AHIGN R  +  D+L R+L Y     
Sbjct: 1   MKVYNTLSRQKEDFKPIDDKEVRIYSCGPTVYNYAHIGNLRTYVFMDILRRVLEY--NGY 58

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            + +V NITD+          +DK+I+ AR E    P+      I    T  F+KD   L
Sbjct: 59  SLKHVMNITDVGHLVSDEDEGEDKMIKGAR-EQKKTPLE-----IAEYYTNIFMKDIKAL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P   P+AT HIP+M+  +  ++  G  YE ++ I FD      YG  SR  +++Q 
Sbjct: 113 NIQVPEIVPKATEHIPEMLEFVHGLVDKGFGYETSDGIYFDIQKFEGYGKLSRANLEDQI 172

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP--GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            G RV     K +PADF +WK++ P E    W S WG G PGWHIECSAM   YLG  FD
Sbjct: 173 AGARVEVNEEKHHPADFAIWKKA-PKEHIMQWPSEWGMGYPGWHIECSAMGRKYLGDTFD 231

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTA-NIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           IH GG+D I  HHENEIAQS     +EK+A N W+H  F+ +   KMSKS GN  TI+ L
Sbjct: 232 IHTGGVDHIPVHHENEIAQSEAL--LEKSAVNYWMHGEFMMVNNGKMSKSLGNTYTIDNL 289

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGII 347
           +E      + +     R   L  HYR  ++FT + +  A++   ++ +   S    K  +
Sbjct: 290 ME------KGYDPMAFRYMCLNAHYRNKLNFTWEVMQSAQVSYDRFVEGVLSHKDGKEQL 343

Query: 348 DPAVL--------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           D AV+         A+ +DLN   A+       R   K+ ++  +      I G  + K+
Sbjct: 344 DSAVVKEFLSDFEDAINDDLNIPKALGVAWNAIRYGKKSQEIYELLTKMNKIFGFNLDKK 403

Query: 400 HLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             +     IS  ++KL++ER      K +  +D IR +L++ GF +ED  N
Sbjct: 404 KDSTGETEISPEVQKLLEERQEARAQKNWKRSDEIRDELKAMGFAVEDTAN 454


>gi|172041351|ref|YP_001801065.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852655|emb|CAQ05631.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 487

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 169/507 (33%), Positives = 248/507 (48%), Gaps = 94/507 (18%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRY 59
           M  +++IY+T  RK+ EF  +    + +Y+CG TV    HIG+ R  + FDVL R LL  
Sbjct: 1   MPLQLRIYDTASRKVREFTPLREGKVSIYLCGATVQSIPHIGHVRSGVAFDVLRRWLLAQ 60

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
            Y    V +VRN+TDIDDKI+ +A +       N       + + + F     +L  L P
Sbjct: 61  GYD---VAFVRNVTDIDDKILTKAAEN------NRPWWEWAATHERAFTWAYDQLGVLPP 111

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT H+PQMI  +Q II +GH Y A+  +    +SI NYG  S +K+DE   G   
Sbjct: 112 SVEPRATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPASIENYGFLSGQKLDELDQGESA 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KKNP DF +WK + P EP W++PWGRGRPGWHIECSAM+++YLG  FDIH GGLD
Sbjct: 172 --GTGKKNPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATNYLGGEFDIHAGGLD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE AQ+  A   +  A  W+HNG++ + G KMSKS GN +++  +LE  +   
Sbjct: 230 LQFPHHENEAAQATAAG--DGFAQYWMHNGWVTMSGEKMSKSLGNVLSVPNILEKVR--- 284

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFT----------------------------------- 323
                PV +R  +   HYR  ++++                                   
Sbjct: 285 -----PVELRYYLGSGHYRSMLEYSESALAEAAAGYRRIEKFLLRAAAYLAAIEDDAPAS 339

Query: 324 ----VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                 R  E  + + +WP+    K          + +DL    A+  +H   RE  K  
Sbjct: 340 AGDQAARGPEQLVAVGQWPEAFAEK----------MNDDLAVPQALAVIHDAVREGNKAL 389

Query: 380 DLLPI---------FNASAHILGIEVCKEH-LNKNIS--------IAIEKLVQE----RL 417
           ++              A   +LG++   EH L + ++         A++ LVQ+    R 
Sbjct: 390 EVKDTETVMRVAGQVRAMMSVLGVDPFDEHWLEQTMAGQGSSAAMTALDSLVQDDLQRRA 449

Query: 418 ILLKMKKFSSADYIRKQLESKGFILED 444
                K ++ AD +R +L + G  + D
Sbjct: 450 EARAEKNWAVADEVRDRLTAAGIEVTD 476


>gi|304436605|ref|ZP_07396574.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370301|gb|EFM23957.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 476

 Score =  273 bits (699), Expect = 3e-71,   Method: Compositional matrix adjust.
 Identities = 140/334 (41%), Positives = 195/334 (58%), Gaps = 17/334 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L +  G +
Sbjct: 2   ITVYNTMTRKKEEFHPLREGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLAHK-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +E  +         I+ +    +      L        PR
Sbjct: 61  -VRYIQNFTDVDDKIIHAANREGVTW------KEISDRYIAAYFTAMDALNVHRADVFPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  +  +I +I+ +I  G+AY     ++ +   +   YG  S R +D+ + G RV    
Sbjct: 114 VSETMDDIIRMIETLIERGYAYVTEAGDVYYSVEAFAPYGCLSGRSLDDMEAGARVEVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIFP
Sbjct: 174 TKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIFP 233

Query: 244 HHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  C D   K A  W+HNGF+ ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQADPCIDADIKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KEY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           P  VIR  +L THYR P+DF+ +RL EA+  L++
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLKEAQAALAR 320


>gi|330834076|ref|YP_004408804.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566215|gb|AEB94320.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 466

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 172/478 (35%), Positives = 254/478 (53%), Gaps = 57/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL R+I  F   +P ++RMYVCGPTVYD  HIG+ R  + FD + R LR      
Sbjct: 2   LRVFNTLGRRIDSFIPNEPHSVRMYVCGPTVYDEVHIGHGRTFVSFDAISRYLRL--KGF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+NITDIDDKII +A+       +  + + ++   T+ +++    L      H P+
Sbjct: 60  NVIRVQNITDIDDKIINKAKS------VGKSWNEVSEYYTKSYLEMINLLKVKIDIH-PK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HI ++I  +Q +I  GHAY AN  + FD  + P YG  S  + +E   G  + ++  
Sbjct: 113 VSSHIKEIIDFVQGLIDRGHAYVANGSVYFDVDTYPKYGELSNIRKEEWDQGEEIVKE-- 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK   P EP W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL+FPH
Sbjct: 171 KKNPYDFALWKAYKPGEPFWDSPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGIDLVFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +     W+H  FL ++  KMSKS GN I + E +   K+G      
Sbjct: 231 HENERAQTESITN-DTWVKYWMHVAFLTIKKEKMSKSKGNIIPLKEAI--AKYG-----P 282

Query: 305 PVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSK----WPQTST------SK 344
             +R   L +HYR PI++          ++QRL +A  +L K     PQ         ++
Sbjct: 283 STLRYWFLSSHYRNPIEYSDDVLEQSAKSLQRLKDAVSILRKIILEGPQHYAKESEIKTQ 342

Query: 345 GIIDPAVL---SALYNDLNTVSAIQALHKLAR----ESTKNHDLLPI---------FNAS 388
             I  A+L   +A+ +D NT +A+ A+H+LA     +   + D+L           FN  
Sbjct: 343 AEIFGAILNFDNAMEDDFNTANALTAIHELASIVFTKLQYSQDVLGAIMALDGFRKFNDV 402

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             ++  E   E     IS  I  +++ R  L + + +  +D IR+ L   G  + D K
Sbjct: 403 FAVMDEEFSSEM--DRISSIINSVIEIRNYLRERQMYELSDKIRESLMKAGIKVLDSK 458


>gi|256833282|ref|YP_003162009.1| cysteinyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686813|gb|ACV09706.1| cysteinyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 469

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 167/474 (35%), Positives = 247/474 (52%), Gaps = 51/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT  R +  F+  +   + +YVCG TV    HIG+ R  + FDVL R L+    + 
Sbjct: 3   LRLFNTATRTVDPFEPREAGKVGVYVCGATVQAAPHIGHMRSAVAFDVLVRWLQRAGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+RN+TDIDDKI+ +      S     A     S N Q F +    L  L PT++PR
Sbjct: 62  -VTYIRNVTDIDDKILAK------SADAKMAWWAWASLNEQAFTEAYDALGNLRPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  MI L+  +I  GHAY ++   + FDT S P YG+ + + IDE+ + T      
Sbjct: 115 ATGHMLDMIDLMGTLIERGHAYVSSPGNVYFDTQSWPQYGALTNQHIDERVLSTADVSDP 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +K++P DF LWK     EP    W +P+G GRPGWH+ECSAM+  YLG  FDIHGGGLDL
Sbjct: 175 NKRDPRDFALWKAPKEGEPSTASWPTPYGTGRPGWHLECSAMARRYLGSEFDIHGGGLDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQS  A   +  A +W+H+ ++   G KMSKS GN + + E+L+       
Sbjct: 235 RFPHHENEQAQSHAAG--DGFARVWMHSAWVTQGGAKMSKSLGNGLLVTEVLKQA----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDP----- 349
             PAPV+R A+   HYR  +++T Q L +A +   ++         +    +  P     
Sbjct: 288 --PAPVLRFALASVHYRSMVEWTQQSLIDAGVAWDRFTGVYRRAVETVGDKVTVPVTTVE 345

Query: 350 ---AVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASAH------ILGIEVC 397
              A   AL +DLN    +  L+   K A  +  N++L    +A         +LG++  
Sbjct: 346 LPQAFTDALNDDLNVAQGLAVLYDSVKTANTALANNNLPEATHAVLQVRAMLDVLGLDPA 405

Query: 398 K---EHLNKNISIAIEKLVQERLILLKM----KKFSSADYIRKQLESKGFILED 444
           +      +     A+  LVQ +L         K ++++D IR  L + G ++ED
Sbjct: 406 QWAAPDTDSRADSALASLVQGQLDRRAQARADKDWATSDAIRDALAAAGIVVED 459


>gi|227496370|ref|ZP_03926660.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834097|gb|EEH66480.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 496

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 172/512 (33%), Positives = 258/512 (50%), Gaps = 86/512 (16%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y++  R +      + P  + +Y+CG TV    HIG+ R  I FDVL R L     E
Sbjct: 9   LRLYDSAARAVVPLAPTVTPGTVAIYLCGATVQGSPHIGHMRSGIAFDVLRRWL-----E 63

Query: 64  KC---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +C   V  VRN+TDIDDKI+ ++    P +P          +  ++F      L    PT
Sbjct: 64  RCGQHVLLVRNVTDIDDKILAKSAAATPPVPW----WAWAQRFEREFDAAYRALGVTPPT 119

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIFDTSSIPNYGSFSRRKID------- 171
           ++PRAT H+PQMI LIQ ++  GHAY  EA N + FD  S+P+YGS + +++D       
Sbjct: 120 YEPRATGHVPQMIDLIQRLLDAGHAYVGEAGN-VYFDVRSLPDYGSLTNQRVDDLATTED 178

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLG 228
           E ++   V  +  K++P DF LWK++ P EP    W++PWGRGRPGWH+ECSAMS  YLG
Sbjct: 179 ESQLDEDV--EADKRDPRDFALWKKAKPGEPADAAWDTPWGRGRPGWHLECSAMSRRYLG 236

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIHGGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + +
Sbjct: 237 ESFDIHGGGIDLRFPHHENEQAQSHGAGW--GFARRWVHNAWVTVKGEKMSKSLGNSLVV 294

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
            ELL       +S+   V+RLA+   HYR  ++F+ + L  A  L  +     T    + 
Sbjct: 295 AELL-------KSYDPAVLRLALGTVHYRSTVEFSEETLDSAAALWERLAGAVTRAAEVS 347

Query: 349 PAV----------------LSALYNDLNTVSAIQALHKL-----------ARESTKNHDL 381
             V                ++A+ +DLN   A+  +H             A ++T+  + 
Sbjct: 348 DDVDAPGEQLRERALPAEYVAAMDDDLNLAGAMAVVHATLKRLNTALAASAVDATEVGEA 407

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA----------------IEKLVQERLILLKMKKF 425
                A   ++G++   E     +  A                +  L+++R      K +
Sbjct: 408 ALDLRAELDVMGLDPLAEPWRSRVLGAGAAGGSDAAMSALDHLVTALIEDRAAARAAKDW 467

Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + AD +R QL + G ++ED      G    RW
Sbjct: 468 ARADALRDQLTAAGVVVED------GADGARW 493


>gi|210623152|ref|ZP_03293607.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
 gi|210153796|gb|EEA84802.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
          Length = 420

 Score =  273 bits (698), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 159/428 (37%), Positives = 224/428 (52%), Gaps = 50/428 (11%)

Query: 49  VFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
           +FD L R L Y   +  VTYV+N TD+DDKII+R+ +E  S P       +  K  +++ 
Sbjct: 1   MFDTLRRYLEYQGYD--VTYVQNFTDVDDKIIKRSHEEGIS-P-----EEVAEKYIKEYF 52

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
            D   L     T  P+ T +IPQ+I  IQ +   G+AY  N ++ FDT     YG  S +
Sbjct: 53  VDCDGLGIKRATVHPQVTQNIPQIIEFIQELEEKGYAYAVNGDVYFDTRKFEGYGKLSGQ 112

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            ID+ + G R+     K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG
Sbjct: 113 NIDDLEAGARIEVNEQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLG 172

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           +  DIH GG DL FPHHENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+
Sbjct: 173 ETIDIHAGGQDLTFPHHENEIAQS-EARSGKPFAKYWMHNGYINVNNEKMSKSKGNFFTV 231

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------- 337
            ++        + +   ++R  +L  HY+ P++F+   L +A   L +            
Sbjct: 232 RDI-------SKKYDLEIVRFFLLSAHYKSPVNFSDDLLAQAGAGLERLYNTKEKLVFTL 284

Query: 338 -----PQTSTSKGIIDP------AVLSALYNDLNTVSAIQALHKLARESTKNHD------ 380
                  T   K +++         +  + +DLNT  AI A+ +L++    N D      
Sbjct: 285 SHLEGEMTDAEKALVEELDGFRKKFVEVMDDDLNTADAITAIFELSKFINLNVDENSSKE 344

Query: 381 ----LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                L  FN    +L I V KE  N ++   +E L+Q+R    K K F+ AD IR+QL 
Sbjct: 345 FAEKCLAEFNELTGVLNI-VNKEKDN-SVDAEVEALIQQRTDAKKNKDFAKADAIRQQLL 402

Query: 437 SKGFILED 444
             G +LED
Sbjct: 403 DMGIVLED 410


>gi|327400878|ref|YP_004341717.1| cysteinyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327316386|gb|AEA47002.1| cysteinyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 471

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 177/495 (35%), Positives = 257/495 (51%), Gaps = 67/495 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL ++  E + +D + +R+YVCG T YD++HIG+AR  ++FD   R L +   E 
Sbjct: 1   MRLYNTLTKREEELK-LDKT-VRIYVCGITAYDYSHIGHARSAVIFDTFRRYLEWKGHE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKI+ RA  E      N     +  K   ++ KD   L     T+ P+
Sbjct: 58  -VIYVQNFTDVDDKIVRRAVAE------NRTQKEVAEKFIAEYFKDMEALNVRKATYHPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            T HI  +I  +  +I  G+AYE    N ++ F   S  +YG  S   ++E       P+
Sbjct: 111 VTEHISDIIQAVSELIKKGYAYEVGGENKDVYFHVPSFSHYGELSGMSLEELNRHRIEPD 170

Query: 182 KYHKKNPADFILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +  KK+  DF LWK +       +  ++SPWG GRPGWHIECS M++ YLG  FDIHGGG
Sbjct: 171 E-RKKDVKDFALWKAAKEEDIKAKAVFDSPWGLGRPGWHIECSVMAAKYLGIPFDIHGGG 229

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENE AQS     IE     WIHN F+ ++G KMSKS GN + I ++L+  K+
Sbjct: 230 KDLIFPHHENERAQSYALHGIE-PVRYWIHNDFVTIKGEKMSKSLGNIVKIRDVLQ--KY 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------S 341
            G      V+R  +L  HYR PID++ + +  AE   S    T                 
Sbjct: 287 NG-----EVLRYFLLSAHYRSPIDYSEESIERAEKAYSALRNTLELIDMEIAAFKTFGGG 341

Query: 342 TSKGIIDPAV-------LSALYNDLNTVSAIQALHKLARESTKN-----------HDLLP 383
              G ++ A        +SA+ ND NT  AI +LH+ +  + K             +   
Sbjct: 342 EGAGELNDATSNLSANFISAMENDFNTPKAIASLHEFSTRTNKAVNKGLAGLEELENAFE 401

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            F +  ++LGI V  + +   +S  + +LV+ER    + K F  AD IR++L  +G++L 
Sbjct: 402 TFLSLCNVLGIFVDYQRV-PVLSSELAELVKEREEARREKNFEKADRIREKLRERGYVLI 460

Query: 444 DYKNPDNGQRMTRWK 458
           D   P    R TRWK
Sbjct: 461 D--TP----RGTRWK 469


>gi|133909679|emb|CAL99791.1| Cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 452

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 165/455 (36%), Positives = 236/455 (51%), Gaps = 56/455 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCG TV    HIG+ R  + +DVL R L   +    V  VRN+TDIDDKI+ +A    
Sbjct: 14  IYVCGATVQGVPHIGHVRGGLNYDVLRRWL--VHNGYDVRLVRNVTDIDDKILTKAADA- 70

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
              P  +      + + + F     RL CL P+  PRAT HI QMI L+Q +I  GHAY 
Sbjct: 71  -GRPWWE----WATAHERAFESAFDRLGCLPPSALPRATGHITQMIELMQRLIDKGHAYA 125

Query: 148 ANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A  ++ F  +S   +YG  S +++DE + G        K++P DF LWK + P EP W +
Sbjct: 126 AGGDVYFSVASYAEHYGRLSGQRLDEVQQGESTASG--KRDPRDFTLWKAAKPGEPSWPT 183

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWH+ECSAMS++YLG  FDIHGGGLDL+FPHHENE+AQS  A   +  A  W+
Sbjct: 184 PWGDGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVFPHHENELAQSTAAG--DGFARYWM 241

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           HN ++ + G KMSKS GN + I  +L+          AP IR  ++  HYR  I+++   
Sbjct: 242 HNAWVTMSGEKMSKSLGNTVAIPAILQRAA-------APEIRYYLVAPHYRSTIEYSEPA 294

Query: 327 LTEA-------EILLSKWPQTS--TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
           L EA       +  +++  Q +     G +     +A+ +DL+T  AI  +H   RES  
Sbjct: 295 LAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAAAMDDDLSTPQAIAVVHNAIRESNA 354

Query: 378 NHD----------------------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
             D                      L P+    A   G +    H    +S  +  ++Q+
Sbjct: 355 ALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADTRGADDAAHHA---LSELVGSMLQQ 411

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           R      + F++AD +R +L++ G  +ED   PD 
Sbjct: 412 RQQARAERDFATADAVRDRLQACGIAVED--TPDG 444


>gi|50955382|ref|YP_062670.1| cysteinyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|61216187|sp|Q6ADI1|SYC_LEIXX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50951864|gb|AAT89565.1| cysteinyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 477

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 167/479 (34%), Positives = 241/479 (50%), Gaps = 54/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T    + +F  +    + MYVCGPTV    HIG+ R  +V+D L R L Y     
Sbjct: 3   LRLFDTKAGALRDFVPLRSGEVGMYVCGPTVQASPHIGHLRSALVYDQLRRWLTYR--GL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT VRN+TDIDDK++  A         ++    +  +  ++F   +  L   APT++PR
Sbjct: 61  AVTLVRNVTDIDDKVLANAAAAQAEGG-SEQWWALAYRFEREFTAASVALGVQAPTYEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT  IPQM  +IQ +I  GHAY A +   ++ FD  S P YG  +R+  D  +       
Sbjct: 120 ATASIPQMQEIIQRLIERGHAYAAGDGSGDVYFDVRSWPAYGELTRQSADSMEAAADADP 179

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++  DF LWK     EP    + SPWG GRPGWHIECSAMS  YLG  FDIHGGGL
Sbjct: 180 RA-KRDGRDFALWKGRKADEPDSAAFPSPWGEGRPGWHIECSAMSRRYLGPRFDIHGGGL 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A   +  AN W+HNG +N+ G+KMSKS GN ++  ELL   +  
Sbjct: 239 DLRFPHHENELAQSAAAG--DSFANYWVHNGLVNVNGQKMSKSLGNSVSAAELLGAAR-- 294

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------TSTS 343
                 P+ +R ++   HYR  ID+    L+EAE  L +                 T + 
Sbjct: 295 ------PLAVRYSLGSAHYRSTIDYHDGSLSEAEAALERIAGFFERVDRRLAGTRFTGSG 348

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHILG 393
             ++  A   A+ +DL    A+  LH+  R      D             +F A   +LG
Sbjct: 349 SEVVPIAFAEAMDDDLAVPQALAVLHETVRSGNAALDAEDLEAAAAARGQVF-AMTEVLG 407

Query: 394 I--------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I        +       + +   +E+L+  R    +++ F +AD IR++L   G  +ED
Sbjct: 408 INPLSPQWRQTGSSAAEQALGTLVERLLHNRQEARQVRDFVAADRIREELTGAGITIED 466


>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 481

 Score =  273 bits (698), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 169/503 (33%), Positives = 245/503 (48%), Gaps = 69/503 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +YNTL RK  +F  + P  ++MYVCG T Y+ +H+GNARP + +DV+ R L +   
Sbjct: 2   RDLYVYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHL-- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+++N TD+DDKII  A  E            I ++    +      L        
Sbjct: 60  GYAVTHIQNFTDVDDKIIHAANGEQVRW------DTIANRYIASYFDVMDALHVRHADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P++I +IQ ++  G AY    ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSEHMPEIIQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK +   EP WESPWG+GRPGWHIECSAMS  YLGK FD HGGG DLIF
Sbjct: 174 TRKHHPMDFALWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS     +      W+HNGF+ +   KMSKS  NF  + ++L         +
Sbjct: 234 PHHENEIAQSEACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLAY-------Y 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-------------ILLSKWPQTSTSKGI--- 346
               +R  ++  HYR P+DFT  RL E               + L+  P    S      
Sbjct: 287 DPDAVRFFLISNHYRSPLDFTDARLEEMTRSLERLRTSIMNVLELATMPAGGKSAEAAAL 346

Query: 347 ------IDPAVLSALYNDLNTVSAIQALH------KLARESTKNH----------DLLPI 384
                 +     +A+ +D NT  A  AL        + RE+  N+          ++  I
Sbjct: 347 LTEAQQVAEDFETAMCDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDTSVITEVKRI 406

Query: 385 FNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLE 436
           F     ILGI   +   N   S A        +E +++ R    + K++  AD IR +L+
Sbjct: 407 FKMMTDILGI--LESAWNGQTSSADASEYAALVEAVLEIRKECREKKQYELADAIRDKLQ 464

Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
           + G  +ED  +P       RWK+
Sbjct: 465 ALGITIED--SPQGA----RWKK 481


>gi|167045369|gb|ABZ10025.1| putative tRNA synthetases class I (C) catalytic domain protein
           [uncultured marine microorganism HF4000_APKG10F13]
          Length = 447

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 170/467 (36%), Positives = 239/467 (51%), Gaps = 56/467 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVY+  H+G+AR  + FD + R L +      V +++N TDIDDKII RA +E 
Sbjct: 1   MYVCGLTVYNDMHLGHARSYVSFDAIRRWLEH--SGYSVEHIQNHTDIDDKIIARAAEE- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                  A + +  +   +   D T L  L P   PRAT ++ QM+ +I +++  GHAY 
Sbjct: 58  -----GVAPADLAERYIARTTADLTALGVLPPHQMPRATAYVEQMVAVIADLLAKGHAYV 112

Query: 148 ANN-------EIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
           A         ++ FD  S+   +G+ + + ++E + G RV     K NPADF LWK +  
Sbjct: 113 AEPAEGALAPDVYFDVPSAREQFGTLTGQSLEELEAGARVAVDPRKHNPADFALWKGARE 172

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP W+SPWG GRPGWHIECSAMS   LG  FDIHGGG DL FPHHE+EI Q+ C     
Sbjct: 173 GEPSWDSPWGTGRPGWHIECSAMSLTLLGPQFDIHGGGSDLKFPHHESEILQTECHTGKH 232

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
                W+H GFL ++  KMSKS  NF  + ++L+          A V+R  +L  HYR P
Sbjct: 233 PMVKYWLHTGFLTVDEEKMSKSLDNFFLVRDVLQYAS-------AEVVRFYLLNAHYRSP 285

Query: 320 IDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVL------------SALYNDLNTV 362
           IDF+   L EA     +   T     + S G   P  L            +A+ +D NT 
Sbjct: 286 IDFSDAALDEAASAHDRLAATLHRYRTASGGDRQPEALHDAVTTARADFTTAMDDDFNTR 345

Query: 363 SAIQALHKLARES------TKNHDLLPIFNASAHILGIEVCKEHLNKNIS----IAIEKL 412
            A+ AL  LARE+      T + +L     A+   LG EV      +  +      IE L
Sbjct: 346 EALAALFGLAREANRYEPGTLDSELRDAVVAAFEELGGEVLGLFAPREATGPGDAEIEAL 405

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + +R      K+++ AD IR +L ++G  ++D   PD      RW++
Sbjct: 406 LAQREAARAAKEWAEADRIRDELTAQGIEVQD--TPDG----VRWRR 446


>gi|223939279|ref|ZP_03631160.1| cysteinyl-tRNA synthetase [bacterium Ellin514]
 gi|223892111|gb|EEF58591.1| cysteinyl-tRNA synthetase [bacterium Ellin514]
          Length = 471

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 176/478 (36%), Positives = 249/478 (52%), Gaps = 57/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIR--MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++NTL R + EF  +DP+  R  +Y CGPTV+D AHIGN R  +  D+L R L +   
Sbjct: 3   LKLFNTLSRSVEEFVPLDPAGKRVGLYCCGPTVHDSAHIGNFRTFVFADLLRRYLEFR-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD++DKII R R        N  +   TSK    F  D   L CL P++ 
Sbjct: 61  GYAVQHVMNITDVEDKIIARVRT------ANTTLKEYTSKYEAAFFADLKSLGCLPPSNT 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN----YGSFSRRKIDEQKMGT 177
           PRAT  I ++I LI+ +I  G AY+A +  + F           YG   +   +E ++G 
Sbjct: 115 PRATEFIGEIISLIEKLIERGIAYKAPDGSVYFSIDKYRGCGCTYGQLLKLNFEEMRVGE 174

Query: 178 RV-PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           RV  ++Y K++ ADF LWK   P E G   W SPWG GRPGWHIECSAMS   LG  FD+
Sbjct: 175 RVKSDEYAKESVADFALWKARVP-EDGTVFWPSPWGEGRPGWHIECSAMSMKLLGPSFDL 233

Query: 234 HGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H GG DLIFPHHE+EIAQS  A      ++    W+H   L +EG+KMSK  GNF  + +
Sbjct: 234 HLGGEDLIFPHHEDEIAQSEGAGLQPSGQRFVKHWMHGAHLLVEGKKMSKRLGNFFVLGD 293

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------W 337
           L   K F GR      IR  +L +HYRE  +FT+  L  A   L++              
Sbjct: 294 LT-AKGFTGRE-----IRYLLLTSHYRETFNFTLDGLQGARTALARIDECLIKLKETAGS 347

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---HDLLP--------IFN 386
            Q S  + +++ A   AL  DLN   A  A+ +   ++ ++   + L P         + 
Sbjct: 348 TQASADEKMVN-AFTQALDKDLNIAGAWGAIFEWVSDTNRHLAENSLTPQQAAAALAAWQ 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +LG+     ++   +   I  L++ R    K K F  +D IR +L++KG+++ED
Sbjct: 407 KIDAVLGVGA---NVEAEVPAEIAALLEARQAARKAKDFKRSDAIRDELKAKGWVIED 461


>gi|237726044|ref|ZP_04556525.1| cysteinyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229435852|gb|EEO45929.1| cysteinyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 493

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 175/494 (35%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYMNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           I ++E  E + K   +++    IR  +L  HYR  +DF+          ++RLTEA   L
Sbjct: 292 INLSEFFEGSHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351

Query: 335 SKWPQTSTSKGI-----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            +   T+ + G+     +     +A+ +DLN+   I  L   AR        ++T + + 
Sbjct: 352 ERITPTAQTTGVEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAED 411

Query: 382 LPIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           L    +  H+   E+   KE    N          ++ L+++R+     K ++++D IR 
Sbjct: 412 LEELKSVFHLFMYEILGLKEETANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471

Query: 434 QLESKGFILEDYKN 447
           +L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKD 485


>gi|311107717|ref|YP_003980570.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
 gi|310762406|gb|ADP17855.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
          Length = 484

 Score =  273 bits (697), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 179/496 (36%), Positives = 253/496 (51%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+      +RMYVCG TVYDF H+G+AR ++ FDV+ R LR      
Sbjct: 2   LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRA--SGL 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEFYIDAMHADERALGVETPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  M+ +I  +  +G AY+A++ ++ F       YG  S + +D+ + G RV    
Sbjct: 114 ATEYVGDMLDIIGKLEQNGLAYQADDGDVNFAVRGFAGYGKLSGKTLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKAEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG- 299
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI + +  ++    
Sbjct: 234 KFPHHENEIAQTEGA-FGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQEEPAAD 292

Query: 300 ----RSWP--APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGII- 347
               R  P  A ++R  ++  HYR P ++T   L +A+  L +  Q      + ++GI  
Sbjct: 293 QAVYRVNPREAEMVRFFIVRNHYRSPQNYTPDNLIDAQNALDRLYQALQNVPADAQGIDW 352

Query: 348 -DP---AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGI------- 394
            +P   A  +A+ +D N+  AI AL +LA E+ +           A A +LG+       
Sbjct: 353 NEPQAQAFKAAMDDDFNSSGAIAALFELASEANRGKSARSAGQLKALASLLGLLQQDPAA 412

Query: 395 ---------EVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                        E   +    + AI+ L+  R      + F+ AD IR +L   G  L+
Sbjct: 413 YFQSPTRYSAAAIEQGERRALDAEAIQSLIDARAAAKAARNFAEADRIRAELREAGIELD 472

Query: 444 DYKNPDNGQRMTRWKQ 459
           D         +T+W++
Sbjct: 473 DKPGG-----LTQWRR 483


>gi|227541001|ref|ZP_03971050.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227183261|gb|EEI64233.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 451

 Score =  273 bits (697), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 166/471 (35%), Positives = 248/471 (52%), Gaps = 43/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            +IY++  R + +F  + P +  +Y+CG TV    HIG+ R  + FD+L   L     + 
Sbjct: 3   FRIYDSKTRTLQDFVPVRPGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLDT 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              +VRN+T+IDDKI+ +A +     P  +      + + + F +    L    P+ +PR
Sbjct: 63  A--FVRNVTNIDDKILTKAAEN--GRPWWE----WAATHERAFNEAYRILGVTPPSIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I  +Q II +GH Y A+  +    ++I  YG  S ++IDE   G        
Sbjct: 115 ATGHITEIIEYMQRIIDNGHGYAADGNVYATPATIEGYGELSGQRIDELDQGESA--GTG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W +PWG GRPGWHIEC+AMS+ YLG  FDIH GGLDL FPH
Sbjct: 173 KRDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHIECTAMSTKYLGSEFDIHCGGLDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +K A  W+HNG++ + G KMSKS GN +++  ++E  +        
Sbjct: 233 HENEIAQATAAG--DKFARYWMHNGWVTMSGEKMSKSLGNVLSVPNVVELVR-------- 282

Query: 305 PV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----SALYND 358
           PV +R  +   HYR  ++++   L EA +   +      S+G + P  L     +AL +D
Sbjct: 283 PVELRYYLGSAHYRSMLEYSEGALHEAAVGYRRIEDFVNSQGPVTPGTLPEQFVNALDDD 342

Query: 359 LNTVSAIQALHKLAREST----KNHDLLPIFNASAHILGIEVCKE---HLNKNISIAIEK 411
           L   +A+  +H   RE      K  +L     A   ILG++   E     N + S A+ K
Sbjct: 343 LGVPAALAVVHTTVREGNAHPEKAAELAGQVRAMTAILGVDPQSETWASANSDSSDALAK 402

Query: 412 LV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           LV    Q+R    + K +++AD +R  L + G  L+D      G   T WK
Sbjct: 403 LVEVHIQQRQKAREEKDWATADAVRDTLAAAGIELKD------GADGTTWK 447


>gi|86606543|ref|YP_475306.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|109894952|sp|Q2JTF4|SYC_SYNJA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86555085|gb|ABD00043.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 506

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 186/522 (35%), Positives = 257/522 (49%), Gaps = 94/522 (18%)

Query: 7   IYNTLERKITEFQAIDPSN--------------IRMYVCGPTVYDFAHIGNARPMIVFDV 52
           +YNTL R+   FQ    S               +RMYVCG TVYD  H+G+AR  +V+D+
Sbjct: 5   VYNTLTRRKEVFQPFGGSESISADEAAGGEKPLVRMYVCGVTVYDLCHLGHARTYVVWDM 64

Query: 53  LYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           + R L  R Y     V YV+N TD+DDKI++RA +        +++  +  +   ++ +D
Sbjct: 65  VRRYLECRGYR----VKYVQNFTDVDDKILKRALER------GESMQAVAERFIAEYFQD 114

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-----------EIIFDTSSI 159
             RL        PRAT  +  M  LIQ++ L G AY   +           ++ +     
Sbjct: 115 MDRLNIKRADLYPRATRSLRAMFELIQSLELKGFAYRVRDPLAPQGETPAYDVYYAVRKF 174

Query: 160 PNYGSFSRRKIDEQKMGT--RVPEK-YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
           P+YG  S RK++E + G   RV E+   K++P DF LWK + P EPG+ESPWG GRPGWH
Sbjct: 175 PDYGQLSGRKLEELEAGASGRVGEEGAGKRDPFDFALWKAAPPSEPGFESPWGWGRPGWH 234

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECSAM    LG   DIH GG DLIFPHHENE+AQS      +  A  W+HNGF+N+ G+
Sbjct: 235 IECSAMVRETLGDHIDIHAGGADLIFPHHENELAQSEPITG-KPLAKYWLHNGFVNVNGQ 293

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EI 332
           KMSKS GNF T+ + L         +    +RL +L THYR PID T   +  A    E 
Sbjct: 294 KMSKSLGNFTTLRQALAL-------YHPMALRLFLLQTHYRSPIDLTEAAMEAASHGWET 346

Query: 333 L------LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--- 383
           L        ++ Q  +       A  +A+ +D  T  A+    +LA+E  + H+LL    
Sbjct: 347 LQKGIHCAQQFGQGGSPDSEAMRAFQTAMDDDFGTPGALALAFELAKELIREHNLLTHQG 406

Query: 384 --------IFNASAHILGI----EVC-------KEHLNKNISIA---------IEKLVQE 415
                   +    A +L I      C        E    N  +A         IE+LV +
Sbjct: 407 HTHLQPHLLRQKGAALLEILATLGFCWPQPAQGSEKAAANGELAKLPPLEDARIEELVAQ 466

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           R    K K F+ AD IR+QL++ G  L D K+       TRW
Sbjct: 467 RTAARKAKNFAEADRIREQLKALGITLIDQKDG-----TTRW 503


>gi|315657556|ref|ZP_07910438.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492028|gb|EFU81637.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 506

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 166/505 (32%), Positives = 256/505 (50%), Gaps = 91/505 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRR--GY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+  A+     +P  +    + +   ++F      L  + PT  P 
Sbjct: 59  AVTYVRNVTDIDDKIL--AKSAAAGVPWWE----LAAHFEREFDFAYRALNTVPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-------DEQKMG 176
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + +       DE ++ 
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           T    +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDI
Sbjct: 173 TAT--EAGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDI 230

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE
Sbjct: 231 HGGGLDLRFPHHENEMAQSHGAGW--GFARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLE 288

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------- 337
                   W   V+R++++ THYR  ++++   L +A +L  K+                
Sbjct: 289 -------DWDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLQQVPRSVPAETA 341

Query: 338 -PQTSTSKGIIDPAV---------------LSALYNDLNTVSAIQALHKLAR-------- 373
            P+     G +DP +               ++AL +DLN   A+ ALH+  +        
Sbjct: 342 APEVRNVYGDVDPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNS 401

Query: 374 --------ESTKNHDLLPIFNASAH----ILGIEVCK---------EHLNKNISIAIEKL 412
                   E+ +   +L +F    H    +  +   +         +  N +++  +  L
Sbjct: 402 GDTTGAQQEALQLRAMLDVFGLDPHDPAWVASVSATETPGTEPNPTDTPNDSLTALVTAL 461

Query: 413 VQERLILLKMKKFSSADYIRKQLES 437
           +Q+R      + +  AD IR  L++
Sbjct: 462 LQQRGEAKAQRDWGRADAIRDLLQT 486


>gi|168998632|ref|YP_001687900.1| hypothetical protein pK2044_00350 [Klebsiella pneumoniae
           NTUH-K2044]
          Length = 328

 Score =  272 bits (696), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 140/310 (45%), Positives = 194/310 (62%), Gaps = 17/310 (5%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  H+G+AR  + FD++ R LR+   +  VT+VRNITDIDDKII+RAR   
Sbjct: 1   MYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD--VTFVRNITDIDDKIIQRARD-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 +    +T +   +   D  +L  L P  +PR T HIPQ+I +I+ ++    AY 
Sbjct: 57  ----TGEDWRSLTERMVHEMHIDFAKLGILPPDIEPRPTEHIPQIISMIERLLHRQFAYI 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A N +++F T+S  +YG  S + I   + GTR+    +K++P DF+LWKR+ P EP W S
Sbjct: 113 AENGDVMFSTASAKDYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+ HYLG  FDIHGGG DLIFPHHENEIAQS  A+      N W+
Sbjct: 173 PWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQSTSAND-GPYVNYWL 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G + +   KMSKS  NF T+ ++L   +F  +S     +R  +L  HYR+P++++ + 
Sbjct: 232 HTGMVTVNKEKMSKSLNNFFTLRDILH--RFDAQS-----VRFFLLGAHYRKPLNYSEEN 284

Query: 327 LTEAEILLSK 336
           +  A   L++
Sbjct: 285 IHIARASLTR 294


>gi|116617314|ref|YP_817685.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272485|sp|Q03ZR0|SYC_LEUMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116096161|gb|ABJ61312.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 468

 Score =  272 bits (696), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 173/477 (36%), Positives = 245/477 (51%), Gaps = 56/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I    I MYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IYVYNTLSREKEVFKPITAGKINMYVCGPTVYNYIHIGNARSAIAFDTVRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA++E  S         + +K    F +DT  L     T + R
Sbjct: 61  -VNYVSNFTDVDDKIINRAQEEGISELE------VANKYADAFDEDTLPLNIKPATVRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP++I  ++++I  G+AYE+  ++ F       YG  + + + E +          
Sbjct: 114 ATEVIPEIIEFVKDLIDKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLNDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEP--GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           E   K++P DF +WK + P E    W SPWG GRPGWHIECS M+  YL    DIHGGG+
Sbjct: 174 ETIRKEDPIDFAVWK-NEPREGVISWSSPWGNGRPGWHIECSVMAQKYLSNTIDIHGGGI 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHH NEIAQS  A   +K  N W+HNGF+N+   KMSKS GNF T++++L T    
Sbjct: 233 DLAFPHHTNEIAQS-EARTGQKFVNYWMHNGFVNVNNEKMSKSLGNFTTLHDMLAT---- 287

Query: 299 GRSWPAP-VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGII 347
              +  P VIR  +  T YR PI++    L +A + L +            +TS   G  
Sbjct: 288 ---YDDPMVIRYLLTTTQYRRPINYEASTLEQARLELERIRTAYRNLMFRAETSEPGGDE 344

Query: 348 DPAVL---------SALYNDLNTVSAIQALHKLA--------RESTKNHDLLPIFNASAH 390
           D   L          A+ +D NT +A+ A+ +L         R + K   +  +    A 
Sbjct: 345 DVETLIEVQKKAFDQAMDDDFNTPNALAAIFELVSIGNTYTERNTVKVDTVQHLLGTIAD 404

Query: 391 IL---GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L   GIE      N+ ++    +L+ +R++  +   F  +D +R QL+  G  +ED
Sbjct: 405 LLSVFGIEGLDG--NEELTTKQRELLDKRVLARESHDFERSDLLRNQLKEVGIFVED 459


>gi|148242769|ref|YP_001227926.1| cysteinyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851079|emb|CAK28573.1| Cysteinyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 511

 Score =  272 bits (696), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 175/489 (35%), Positives = 248/489 (50%), Gaps = 70/489 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           ++  N+L  +   F+ ++     +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 33  LRFTNSLTSRTEAFEPLEAGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGYD- 91

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYV+N TDIDDKI++RA +E  S+        ++ +N + F  D  RL  L     
Sbjct: 92  ---VTYVQNYTDIDDKILKRAAEEGSSM------QAVSERNIEAFEIDMGRLNILPADRM 142

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
           PRAT  I  +  LI+ +   G AY A+ ++ F  +   +YG  S R  +EQ+ G    T 
Sbjct: 143 PRATRCIDGIQQLIRELEAKGAAYSADGDVYFAVAKANDYGKLSGRDPNEQQQGASGRTA 202

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   EP W+SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 203 EGEESRKRHPFDFALWKGAKEGEPSWDSPWGPGRPGWHIECSAMVRQELGLTIDIHLGGG 262

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+     A +W+HNG +N+ G KMSKS GNF TI  LL+     
Sbjct: 263 DLVFPHHENEIAQSETANGT-TLAKLWMHNGMVNVGGTKMSKSLGNFTTIRALLD----- 316

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA---------EILLSK-------WPQTS 341
             S  +P+ +RL +L  HYR+P+DFT + L  A          +LL +       W   S
Sbjct: 317 --SGVSPMTLRLFVLQAHYRKPLDFTAEALDAAANGWKGLNSALLLGERHGEALGW---S 371

Query: 342 TSKGIIDPAV-------LSALYNDLNTVSAIQALHKLARE--------------STKNHD 380
           +  G +   +       + A+ +DLN+   +  L +LAR               +  +  
Sbjct: 372 SGAGELSSELEEQRQRFIEAMDDDLNSSGGLAVLFELARPLRALANRLERGDAITADDQG 431

Query: 381 LLPIFN-----ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           L   +      A A  L  E+     + +    I  L++ R      K +  AD IR +L
Sbjct: 432 LAGQWQLLQDLAGALGLATEITAPSSDGDDGARISDLIEARKSAKANKDYGEADRIRAEL 491

Query: 436 ESKGFILED 444
           +++G  L D
Sbjct: 492 KAEGIELID 500


>gi|329964460|ref|ZP_08301514.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328524860|gb|EGF51912.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 491

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 262/503 (52%), Gaps = 60/503 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEELE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMLTINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ EL + T     +++    IR   L  HYR  +DF+ + L  AE  LS+        
Sbjct: 292 ITLEELFKGTHPLLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLSRLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLLP 383
             I PA +S             A+ +DLN+   I  L          LA   T   + L 
Sbjct: 352 DKITPAAVSTVDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDTVTTEDLK 411

Query: 384 IFNASAH-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H     ILG++      E         ++ L++ER+     K ++++D IR +L
Sbjct: 412 ELKETFHTFCFDILGLKEDNASNEEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
            + GF ++D      G+    WK
Sbjct: 472 TALGFEIKD------GKEGCEWK 488


>gi|193211882|ref|YP_001997835.1| cysteinyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085359|gb|ACF10635.1| cysteinyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 488

 Score =  272 bits (695), Expect = 9e-71,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 255/493 (51%), Gaps = 62/493 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + IYN+L RK   F+ I P    +YVCGPTVY  AH+G+A+  + FDV+ R LR+ 
Sbjct: 1   MPSSLHIYNSLTRKKEPFEPIQPGLATIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHV 60

Query: 61  YGEKC---VTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQF 107
            GE+    V YV+NITD+          +DKI ++ARQE    P+      +    T+ F
Sbjct: 61  -GEQQGYKVRYVQNITDVGHLTDDADEGEDKIQKQARQERIE-PME-----VAQFYTRSF 113

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D  RL    P   P AT HIP+ I L++ ++  GHAYE+N  + FD +S   YG  S 
Sbjct: 114 YEDMDRLGVERPNIAPTATGHIPEQIALVERLVETGHAYESNGNVYFDVNSFAGYGKLSG 173

Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R   E  + G RV E+  K+NP+DF LWK++ P     W+SPWG G PGWH+ECSAM+  
Sbjct: 174 RTDQEALQSGGRVAERSDKRNPSDFALWKKAEPSHIMKWQSPWGEGYPGWHLECSAMAMK 233

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG   DIHGGG++  FPHH+ EIAQS  A   +     W+HN  + ++G KM KS  NF
Sbjct: 234 YLGDTIDIHGGGMENKFPHHDCEIAQSEAATG-KPFVRYWMHNNMVTVDGVKMGKSLKNF 292

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----- 340
           + + EL  T       +   VIR  +L +HYR P+DF+   +  ++    K  +T     
Sbjct: 293 VNLKELFGT-------FDPLVIRFFILQSHYRSPLDFSEAAIKASQSGFEKLQETYKRLV 345

Query: 341 --STSKGIIDPA-----VLSALYNDLNTVSAIQALHKLARESTKNHD------------L 381
             +  KG ++ A     +  AL +D NT  AI  L +  +      D            L
Sbjct: 346 ESAEDKGQLEVATFEQKITDALNDDFNTPVAIAVLFEFIKALNGALDKGGLDAASKAAAL 405

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL-ILLKMKK-------FSSADYIRK 433
             +   +  +LGI   +  L    S    + + + + +LL+++K       F+++D IR 
Sbjct: 406 ALLATYAGEVLGILKSRNELLAGESGESAQTLDDVMQVLLELRKEARANKDFATSDKIRD 465

Query: 434 QLESKGFILEDYK 446
            L  +G  ++D K
Sbjct: 466 LLMERGIEVKDTK 478


>gi|298345949|ref|YP_003718636.1| cysteine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236010|gb|ADI67142.1| cysteine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 506

 Score =  272 bits (695), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/505 (32%), Positives = 256/505 (50%), Gaps = 91/505 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRR--GY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+  A+     +P  +    + +   ++F      L  + PT  P 
Sbjct: 59  AVTYVRNVTDIDDKIL--AKSAAAGVPWWE----LAAHFEREFDFAYRALNTVPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-------DEQKMG 176
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + +       DE ++ 
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           T    +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDI
Sbjct: 173 TAT--ETGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDI 230

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE
Sbjct: 231 HGGGLDLRFPHHENEMAQSHGAGW--GFARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLE 288

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------- 337
                   W   V+R++++ THYR  ++++   L +A +L  K+                
Sbjct: 289 -------DWDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLLQVPRSVPAETA 341

Query: 338 -PQTSTSKGIIDPAV---------------LSALYNDLNTVSAIQALHKLAR-------- 373
            P+     G ++P +               ++AL +DLN   A+ ALH+  +        
Sbjct: 342 APEVRNVYGDVNPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNS 401

Query: 374 --------ESTKNHDLLPIFNASAH----ILGIEVCK---------EHLNKNISIAIEKL 412
                   E+ +   +L +F    H    +  +   +         E  N +++  +  L
Sbjct: 402 GDTTGAQQEALQLRAMLDVFGLDPHDPAWVASVSAAETPGTAPNPTETPNDSLTALVTAL 461

Query: 413 VQERLILLKMKKFSSADYIRKQLES 437
           +Q+R      + +  AD IR  L++
Sbjct: 462 LQQRGEAKAQRDWGRADAIRDLLQT 486


>gi|332669126|ref|YP_004452134.1| cysteinyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332338164|gb|AEE44747.1| cysteinyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 478

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 168/495 (33%), Positives = 252/495 (50%), Gaps = 60/495 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T  R + +F  +    + +Y+CG TV    H+G+ R  + FDVL R LR   G 
Sbjct: 5   SLRLYDTATRTVRDFVPLTAGEVGIYLCGATVQAPPHVGHVRSSVAFDVLVRWLRRT-GH 63

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VT VRN+TDIDDKI+ +A          +        N + F      L  L PT++P
Sbjct: 64  R-VTLVRNVTDIDDKILAKA------AAAGEPWWAWAMTNERAFTSAYDALGVLPPTYEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQ-KMGTRVPE 181
           RAT H+P M+ L+  ++  GHAY A   ++ FD  S P+YG+ + +++D+        P+
Sbjct: 117 RATGHVPAMVELMTRLVERGHAYAAGEGDVYFDVRSFPDYGALTNQRVDDMVPAPDGAPD 176

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              KK+P DF LWK + P EP    W++P+GRGRPGWH+ECSAM+  YLG  FDIHGGGL
Sbjct: 177 GVVKKDPRDFALWKAAKPGEPETAAWDTPYGRGRPGWHLECSAMARRYLGDGFDIHGGGL 236

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A  W+HNG++   G KMSKS GN + ++ +L+  +  
Sbjct: 237 DLRFPHHENEQAQSHAAGY--PFARYWLHNGWVTQGGTKMSKSLGNGLLVDVVLQQVR-- 292

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWPQTSTSK----------- 344
                A V+R AM    YR  +++T   L EAE     L+ + + +T +           
Sbjct: 293 -----AVVVRYAMTTVQYRSMLEWTDDTLREAEAAWDRLAGFVERATERVGAVDAEEVAA 347

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNAS-------AHILGIE 395
             +      A+ +DLN   A+  +H+  R+  S    D L    A+         +LG++
Sbjct: 348 APVPQDFADAMDDDLNVPKAMAVVHEWLRQGNSALADDALDDVRATLVGLRAMLDVLGLD 407

Query: 396 VCK---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                       E   K +   +   V+ R      + F++AD IR +L + G ++ED  
Sbjct: 408 PGSPQWATRGGDERYAKALDALVAGQVEARAAARAARDFATADAIRDRLTAAGVVVED-- 465

Query: 447 NPDNGQRMTRWKQKP 461
           +P       RW  +P
Sbjct: 466 SPTG----ARWSLRP 476


>gi|304390348|ref|ZP_07372301.1| cysteine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326104|gb|EFL93349.1| cysteine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 506

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/505 (32%), Positives = 256/505 (50%), Gaps = 91/505 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRR--GY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+  A+     +P  +    + +   ++F      L  + PT  P 
Sbjct: 59  AVTYVRNVTDIDDKIL--AKSAAAGVPWWE----LAAHFEREFDFAYRALNTVPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-------DEQKMG 176
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + +       DE ++ 
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           T    +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDI
Sbjct: 173 TAT--ETGKRDPRDFALWKAAKDDEPSDATWDAPWGRGRPGWHLECSAMSQAYLGDTFDI 230

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE
Sbjct: 231 HGGGLDLRFPHHENEMAQSHGAGW--GFARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLE 288

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------- 337
                   W   V+R++++ THYR  ++++   L +A +L  K+                
Sbjct: 289 -------DWDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLLQVPRSVPAETA 341

Query: 338 -PQTSTSKGIIDPAV---------------LSALYNDLNTVSAIQALHKLAR-------- 373
            P+     G ++P +               ++AL +DLN   A+ ALH+  +        
Sbjct: 342 APEVRNVYGDVNPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNS 401

Query: 374 --------ESTKNHDLLPIFNASAH----ILGIEVCK---------EHLNKNISIAIEKL 412
                   E+ +   +L +F    H    +  +   +         E  N +++  +  L
Sbjct: 402 GDTTGAQQEALQLRAMLDVFGLDPHDPAWVASVSAAETPGTAPNPTETPNDSLTALVTAL 461

Query: 413 VQERLILLKMKKFSSADYIRKQLES 437
           +Q+R      + +  AD IR  L++
Sbjct: 462 LQQRGEAKAQRDWGRADAIRDLLQT 486


>gi|227489407|ref|ZP_03919723.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227090585|gb|EEI25897.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 451

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 166/471 (35%), Positives = 247/471 (52%), Gaps = 43/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            +IY++  R + +F    P +  +Y+CG TV    HIG+ R  + FD+L   L     + 
Sbjct: 3   FRIYDSKTRTLQDFVPARPGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLDT 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              +VRN+T+IDDKI+ +A +     P  +      + + + F +    L    P+ +PR
Sbjct: 63  A--FVRNVTNIDDKILTKAAEN--GRPWWE----WAATHERAFNEAYRILGVTPPSIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I  +Q II +GH Y A+  +    ++I  YG  S ++IDE   G        
Sbjct: 115 ATGHITEIIEYMQRIIDNGHGYAADGNVYATPATIEGYGELSGQRIDELDQGESA--GTG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W +PWG GRPGWHIEC+AMS+ YLG  FDIH GGLDL FPH
Sbjct: 173 KRDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHIECTAMSTKYLGSEFDIHCGGLDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +K A  W+HNG++ + G KMSKS GN +++  ++E  +        
Sbjct: 233 HENEIAQATAAG--DKFARYWMHNGWVTMSGEKMSKSLGNVLSVPNVVELVR-------- 282

Query: 305 PV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----SALYND 358
           PV +R  +   HYR  ++++   L EA +   +      S+G + P  L     +AL +D
Sbjct: 283 PVELRYYLGSAHYRSMLEYSEGALHEAAVGYRRIEDFVNSQGPVTPGTLPEQFVNALDDD 342

Query: 359 LNTVSAIQALHKLAREST----KNHDLLPIFNASAHILGIEVCKE---HLNKNISIAIEK 411
           L   +A+  +H   RE      K  +L     A   ILG++   E     N + S A+ K
Sbjct: 343 LGVPAALAVVHTTVREGNAHPEKAAELAGQVRAMTAILGVDPQSETWASANSDSSDALAK 402

Query: 412 LV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           LV    Q+R    + K +++AD +R  L + G  L+D      G   T WK
Sbjct: 403 LVEVHIQQRQKAREEKDWATADAVRDTLAAAGIELKD------GADGTTWK 447


>gi|313902850|ref|ZP_07836247.1| cysteinyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466970|gb|EFR62487.1| cysteinyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 529

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 139/327 (42%), Positives = 192/327 (58%), Gaps = 16/327 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL  +   F+ ++P  +RMY CGPTVYD+ H+GN R  + FDV+   L Y  G +
Sbjct: 3   IQIYNTLTGQKEPFEPLEPGRVRMYNCGPTVYDYFHVGNLRTFLFFDVVRGWLEYR-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDK+I RA +   S+        +  +  + + +D   L  +     PR
Sbjct: 62  -VRYIQNFTDIDDKLIRRAAERGISV------KELADEQIRAYFEDADALGIVRADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  I  +I LIQ +I  G+AY AN ++ FD S   +YG  S ++ ++   G RV    +
Sbjct: 115 VSEKIGAIIGLIQRLIDQGYAYVANGDVFFDVSRFRDYGKLSGQRTEQLLAGARVEASEN 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK   P EP W+SPWG GRPGWHIECSAM+   LG   DIH GG DL+FPH
Sbjct: 175 KRNPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMAMDELGTTLDIHSGGSDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+H   + + G++M KS GNF  + +L        R  P 
Sbjct: 235 HENEIAQSEAATG-QPFARYWMHVALVQVGGQRMGKSMGNFWRVRDLR------ARFHPE 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE 331
             IRL +L  HYR P++F+++ L +AE
Sbjct: 288 -AIRLFILSAHYRNPLEFSLEALEQAE 313


>gi|119718240|ref|YP_925205.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225302|sp|A1SNY3|SYC_NOCSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119538901|gb|ABL83518.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 471

 Score =  271 bits (694), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 172/486 (35%), Positives = 250/486 (51%), Gaps = 63/486 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            ++Y+T  R++ +F  ++     +YVCG TV    H+G+ R  + FDVL R LR+   + 
Sbjct: 3   FRLYDTATREVRDFVPLEEGKAGLYVCGLTVQSEPHVGHVRSGVNFDVLQRWLRHLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKI+ ++ ++        A   +  +  +Q  +    L    PT++P 
Sbjct: 62  -VTFIRNVTDIDDKILVKSAEQ------GLAWYQLAYRMKRQLDRAYDDLNVAPPTYEPA 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT H+P+MI LIQ +I  GHAY A +   ++ FD  S P YG  +R+ ID+ +       
Sbjct: 115 ATGHVPEMIVLIQELIAKGHAYAAEDGSGDVYFDVRSWPQYGELTRQGIDDMEAAEDADP 174

Query: 182 KYHKKNPADFILWK----RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +  K++P DF LWK     S P    W SPWG GRPGWHIECSAM+  YLG  FDIHGGG
Sbjct: 175 R-GKRDPRDFALWKGWKKDSEPETAAWPSPWGPGRPGWHIECSAMAGKYLGPAFDIHGGG 233

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHHENE AQS  A R    A  W+HN ++   G KMSKS GN +TI  +L+  K+
Sbjct: 234 VDLRFPHHENEQAQSRAAGR--PFATYWMHNAWITTAGEKMSKSLGNSLTIPAVLQ--KY 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPA 350
            G       +R  ++  HYR  ++F+ + L EA       E  L +        G     
Sbjct: 290 RGIE-----LRYYLVAAHYRSHVEFSFEALDEAATGFRRIENFLDRAADVLGGIGGGIAC 344

Query: 351 V--LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------HILGIEV 396
              L+A+ +DL T +A+ A+H++ RE  K   LL   ++ A             +LG++ 
Sbjct: 345 ADFLNAMNDDLGTPAAVAAIHEVVREGNK---LLAAGDSPALRGNAASVVAMLDVLGLDP 401

Query: 397 CK------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                         E L   +   +  L+ +R      + F SAD IR +L + G  LED
Sbjct: 402 ADPAWSSPGGGRTAERLETVVEGLVSDLLTQREKARADRDFVSADAIRDRLHAVGVQLED 461

Query: 445 YKNPDN 450
              PD 
Sbjct: 462 --TPDG 465


>gi|325283376|ref|YP_004255917.1| cysteinyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315185|gb|ADY26300.1| cysteinyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 489

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 184/504 (36%), Positives = 258/504 (51%), Gaps = 74/504 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +Y+T++R+   F+   P ++ MY+CGPTVY  AH+G+A+  + FDV+ R    ++G K
Sbjct: 11  IHLYDTMQRQKVRFEPSTPGHVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRTF-LHFGYK 69

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YV NITD+          +DK++ RAR E    P+      +  K    F KD   L
Sbjct: 70  -VRYVANITDVGHLQNDSDDGEDKMLARARLEQLE-PME-----VADKYFWSFFKDMDAL 122

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P+  PRAT HI + I LI+ +I  GHAYE+N  + FD  S P YG  S RK+D+Q+
Sbjct: 123 NVLRPSINPRATGHIQEQIKLIEELIEKGHAYESNGSVYFDVRSWPEYGKLSGRKLDDQE 182

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            GTR   +  K++P DF LWK + P     W+SPWG G PGWHIECSAMS  YLG+ FDI
Sbjct: 183 EGTREAVREEKRDPRDFALWKNAEPEHIMRWDSPWGVGFPGWHIECSAMSLKYLGEGFDI 242

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHE EIAQ+  A      A  W+HN  L + G KMSKS GNF TI ++L+
Sbjct: 243 HGGGLDLQFPHHEAEIAQAEAAG--HHFARYWMHNNMLTIGGEKMSKSKGNFTTIQDILQ 300

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQ 339
                   +   V+R  ++ +HYR   +                V  L E E  L+  P 
Sbjct: 301 -------RYDPMVVRFLLVSSHYRSVTEMNDEAFASAANGYRRLVDTLAEIERRLNDAP- 352

Query: 340 TSTSKGIIDPAVLS-------ALYNDLNTVSAIQALHKLARE--------STKNHDLLPI 384
            + +   +D  + +       A+ +D NT  A+ AL+ L  E        +     L   
Sbjct: 353 -AGADAALDAKIAARVQEFEDAMRDDFNTPKAVAALYGLTTEMNTALNAGAVGRETLEQA 411

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERL--ILLK-------MKKFSSADYIRKQL 435
            NA   + G  +     N   +   +  V +RL  I+LK        K+++ AD +R  L
Sbjct: 412 RNAYRTLGGDVLGLFAGNGQAATQDDAPVVDRLMEIVLKARQNYRLQKQYAEADELRDTL 471

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
            + G  +ED K+        RWK+
Sbjct: 472 GAVGITVEDTKDG------ARWKR 489


>gi|167752833|ref|ZP_02424960.1| hypothetical protein ALIPUT_01094 [Alistipes putredinis DSM 17216]
 gi|167659902|gb|EDS04032.1| hypothetical protein ALIPUT_01094 [Alistipes putredinis DSM 17216]
          Length = 490

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 159/402 (39%), Positives = 230/402 (57%), Gaps = 38/402 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ +YNTL+R+   F+ I+P ++ MYVCGPTVY   H+G+ARP + FD+L+R LR  
Sbjct: 1   MESKLTLYNTLDRRKETFEPINPPHVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLRSL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRN+TD+          +DKI ++AR E    P+      +    T+++ + 
Sbjct: 61  -GYK-VRYVRNVTDVGHLEHDADDGEDKISKKARLEQLE-PME-----VAHYYTERYHRA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I +++ I+ +G AYE+N  + FD        +YG  S 
Sbjct: 113 MDELNVLSPSIEPCASGHIIEQIAMVKEILDNGFAYESNGSVYFDVEKYNRKYSYGRLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K++  DF LWK+++P     W SPW  G PGWH+ECSAMS+ 
Sbjct: 173 RNLDDILTNTRELDGQGDKRHSCDFALWKKASPEHIMRWPSPWSDGFPGWHMECSAMSTK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQS  A     +A  WIHN  + + G+KM KS GNF
Sbjct: 233 YLGQRFDIHGGGMDLMFPHHECEIAQSTAA-LGHDSAKYWIHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
           IT+ EL     K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +     
Sbjct: 292 ITLEELFTGNHKLLTQAYSPMTIRFFVLQAHYRSTLDFSNEALQAAEKGLDRLMKAVEAL 351

Query: 341 ----STSKGIIDPAVL-----SALYNDLNTVSAIQALHKLAR 373
                + +  +DPA L      AL +DLN+  AI AL    R
Sbjct: 352 DKIKPSEQSTVDPAELETRCREALDDDLNSPMAISALFDWVR 393


>gi|332283464|ref|YP_004415375.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330427417|gb|AEC18751.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 483

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 255/495 (51%), Gaps = 54/495 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R     + ++P  +RMYVCG TVYDF H+G+AR ++ FD++ R LR    + 
Sbjct: 2   LHIYNTLSRAKEPLKTVEPGLVRMYVCGMTVYDFCHLGHARMLVSFDIVQRWLRASGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA Q          +S +TS        D   L   +P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIRRAVQN------GQRMSEVTSFFIDAMHADERALGVASPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ +M+ +I+ +  +G AY++++ ++ +     P YG  S + +D+ + G RV    
Sbjct: 114 ATEHVGEMLGIIKCLEQNGLAYQSDDGDVNYAVRDFPGYGKLSGKSLDDLRAGERVAVSS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W S +G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 GKRDPLDFVLWKAAKSDEPDESKWPSNYGLGRPGWHIECSAMSRALLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------- 292
            FPHHENEIAQS  A      A++W+H G L ++  KMSKS GNF TI   +        
Sbjct: 234 KFPHHENEIAQSEGA-FGGTLASVWMHCGPLMVDSDKMSKSLGNFRTIRATISIDANLPA 292

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIID 348
           +   +      A ++R  ++  HYR   ++    L +A+  L +  QT          ID
Sbjct: 293 DQASYSANPREAEMLRFFIVRNHYRSQQNYAPDNLFDAQNALDRLYQTLHNVPAEPVQID 352

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--IFNASAHILGIEVCK-- 398
                  A  +A+ +D NT  A+ AL +L+ E+ +N       +  A   ILG+      
Sbjct: 353 WNHPAAQAFRAAMDDDFNTSGAVAALFELSSEANRNGSGRSSGLMRALGGILGLLQSDPA 412

Query: 399 EHLNKNI--------------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +L                  S  IE L+++R +  + + F+ AD IRK L+  G  LED
Sbjct: 413 TYLQSPTRYQPGSGSAQAVFASEQIEALIKDRALAKQERNFAQADQIRKTLQEGGIELED 472

Query: 445 YKNPDNGQRMTRWKQ 459
                    +T+W++
Sbjct: 473 KAGG-----VTQWRR 482


>gi|297627017|ref|YP_003688780.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922782|emb|CBL57360.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 467

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/485 (36%), Positives = 246/485 (50%), Gaps = 59/485 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+    ++  F  + P  + +Y CG TV    H+G+ R  +VFDVL R   +      V
Sbjct: 5   LYDESSGQVVPFVPLIPGKVSIYHCGLTVQSSPHLGHMRKEVVFDVLRRW--FDASGYRV 62

Query: 67  TYVRNITDIDDKIIERARQEHPS-IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
             V NITDI++KI ++A +       +  A+ +       +  +    L C+ P+++PRA
Sbjct: 63  RVVANITDINEKIWQKAAEAGLEWFELAYAVEL-------ELHRAYASLGCIPPSYEPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HI +MI LI  +I  GHAY A++   ++ FD  S P YG  S +KID+    T    +
Sbjct: 116 TGHITEMIELINRLIERGHAYAADDGSGDVYFDVRSWPEYGELSHQKIDDMVAATDADPR 175

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K +P DF LWK S P EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 176 -GKHDPRDFALWKGSKPDEPATASWPSPWGRGRPGWHLECSAMSLKYLGEAFDIHGGGID 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE AQS  A      A+ W+HN F+ + G KMSKS GN  T+ E+  TK +  
Sbjct: 235 LRFPHHENEQAQSRAAGY--DFAHYWMHNAFVTMAGEKMSKSLGNGATVAEV--TKHY-- 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDP 349
              PA  +RL +   HYR  I+++   LTEA   L +            Q +     +  
Sbjct: 289 ---PARAVRLYLAQPHYRSTIEYSDTSLTEATAQLDRIDSFLNRAHVSGQAAFDTADLPD 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH 400
           A + A+ NDL T +A   L+   +E  +  D          +    A  H+LG++  +  
Sbjct: 346 AFVEAMDNDLGTPAAFAVLYDTIKEGNRAFDANDQGAATNCVAQVRAMLHVLGLDPHEPQ 405

Query: 401 LNKN-------ISIAIEKLV-QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                      ++  + KLV  ER    + K F++AD+IR  L   G  LED      G 
Sbjct: 406 WADQAGGTDLAVTDGLVKLVLDERQAARERKDFAAADHIRDSLTELGIRLED------GA 459

Query: 453 RMTRW 457
             TRW
Sbjct: 460 NGTRW 464


>gi|46198845|ref|YP_004512.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|61216249|sp|Q72KB0|SYC_THET2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46196468|gb|AAS80885.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 480

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 171/492 (34%), Positives = 255/492 (51%), Gaps = 75/492 (15%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+TL R+   F+   P ++ +YVCGPTVY   H+G+AR  +V+D+L R    + G K V
Sbjct: 5   IYDTLARRKVPFEPAVPGHVGIYVCGPTVYSDPHLGHARGPVVYDILRRYF-LHKGYK-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +V NITD+          +DKI+ RA+ E    P+      +  K    +      L  
Sbjct: 63  RFVSNITDVGHLTDDADEGEDKIVRRAKLERLE-PME-----VADKYMWSYFDAMQALNV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L P+  PRA+ HIP+M+ L + ++  GHAYE    + F   S P YG  S ++++E + G
Sbjct: 117 LRPSIAPRASGHIPEMLELTERLLARGHAYERKGSVYFRVRSFPEYGKLSGKRLEELRAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            RV  +  K++P DF LWK +   EPG    W+SPWG G PGWHIEC+AMS  YLG+ FD
Sbjct: 177 ARVEVREEKEDPLDFALWKAA---EPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGFD 233

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H GG+DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++LL
Sbjct: 234 LHAGGIDLQFPHHECEIAQAEAAGF--RFARHWMHHNHVLLEGEKMAKSTGNLVLLHDLL 291

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKW----------- 337
           E  +          +R  +L THYR P+DFT + L  A+     LL  +           
Sbjct: 292 EAHE-------PMALRFYLLQTHYRSPMDFTWEGLESAKRGYGRLLHAYREVRGRKKTAP 344

Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
               P+   +   ++ A + A+ +DL+T  A+ AL     E    H LLP   A + +  
Sbjct: 345 PGTTPELERALDALEKAFMEAIEDDLSTPEALAALFAFLPEL---HKLLPEAKAES-LAR 400

Query: 394 IEVCKEHLNKNI-SIAIEKLVQERLI-----------------LLKMKKFSSADYIRKQL 435
            E     L + I  +  E++++ER+                    + K +  +D IR++L
Sbjct: 401 AEAVFHTLGEGILGLFPERVLEERVSGPLLEGLIALLLELREEARRAKDYEKSDLIRERL 460

Query: 436 ESKGFILEDYKN 447
            + G I+ED K 
Sbjct: 461 RALGVIVEDTKE 472


>gi|212692228|ref|ZP_03300356.1| hypothetical protein BACDOR_01724 [Bacteroides dorei DSM 17855]
 gi|265752921|ref|ZP_06088490.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212665105|gb|EEB25677.1| hypothetical protein BACDOR_01724 [Bacteroides dorei DSM 17855]
 gi|263236107|gb|EEZ21602.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 493

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/494 (35%), Positives = 264/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           I ++E    T K   +++    IR  +L  HYR  +DF+          ++RLTEA   L
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351

Query: 335 SKWPQTSTSKGI-----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            +   ++ + GI     +     +A+ +DLN+   I  L   AR        ++T + + 
Sbjct: 352 ERITPSAQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAED 411

Query: 382 LPIFNASAHILGIEVC--KEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           L    +  H+   E+   KE    N          ++ L+++R+     K ++++D IR 
Sbjct: 412 LEELKSVFHLFMYEILGIKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471

Query: 434 QLESKGFILEDYKN 447
           +L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKD 485


>gi|297572189|ref|YP_003697963.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932536|gb|ADH93344.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 475

 Score =  271 bits (693), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 166/480 (34%), Positives = 249/480 (51%), Gaps = 59/480 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++  R + EF ++ P  + +Y+CG TV    HIG+ R  + FDVL R LR    E 
Sbjct: 3   LHIYDSATRAMREFTSLVPGKVGIYLCGATVQGSPHIGHMRSAVAFDVLVRWLRRSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             T VRN+TDIDDKI+ ++         +  I         +F +    L  L PT++PR
Sbjct: 62  -TTMVRNVTDIDDKILAKSADAGREFWAHAYI------YENEFTQAYDALGVLRPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P+MI  I  +I  GHAY  ++  + FD +S+ +YGS +R+ +D+      V    
Sbjct: 115 ATGHVPEMIAFIARLIERGHAYPGDSGNVYFDVASLADYGSLTRQTLDDFNDDAAVEPD- 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K+NP DF LWK + P EP    W++PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DL
Sbjct: 174 -KRNPRDFALWKAAKPGEPASASWDTPWGRGRPGWHLECSAMAGKYLGESFDIHGGGIDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + ++ +LE       
Sbjct: 233 RFPHHENEQAQSHGAGY--GFAQYWMHNAWVTIDGEKMSKSLGNSLIVSRILE------- 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------TSTSKGI- 346
            +PA V+RLA+   HYR  + ++ + L EA  +  +                     GI 
Sbjct: 284 EYPAVVVRLALGAVHYRSTVAYSDRTLAEAGAVWDRLAGFVRRAIDAVGEVPAEEVAGIG 343

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHK---------LARESTKNHDLLPIFNASAHILGI 394
              +    + A+ +D+N  +A+  +H+          A E  +      +  A   +LG+
Sbjct: 344 LAELPDEFVDAMDDDVNVSAALAVIHEHVTAGNNAIAAEEHVEIRQEQALVRAMLDVLGL 403

Query: 395 EVCKEHLNKNISI------AIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILED 444
           + C    ++  S       A++ LV     ER      K ++ AD +R  L++ G  +ED
Sbjct: 404 DPCASPWHEESSAGSDYHEALDSLVHAILNERAAARAAKDWARADALRDSLQTAGIQVED 463


>gi|217076406|ref|YP_002334122.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226735065|sp|B7IFB7|SYC_THEAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217036259|gb|ACJ74781.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 469

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 166/463 (35%), Positives = 238/463 (51%), Gaps = 51/463 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I NT   K  E + I+P  ++MYVCGPTVY++ HIGNARP +VFD   R L Y  G K
Sbjct: 3   IYITNTETGKKEELKTIEPGVVKMYVCGPTVYNYIHIGNARPAVVFDAFRRFLEYR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +  V+N TDIDDKII  A +    +   D      +    ++ KD   L   A    PR
Sbjct: 62  VIM-VQNFTDIDDKIINEANE--WGVDFKDVADTFIA----EYWKDAQSLGIRAANFHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+++ +++  ++ +I  G+AY   N ++ F       YG  S +KI++   G RV    
Sbjct: 115 TTDYVNEIVDAVEKLISKGYAYTVENGDVYFSVKKFERYGKLSGKKIEDLISGARVEVNT 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF LWK   P EP W+SPWG GRPGWHIECS MS   LG  FDIH GG DLIFP
Sbjct: 175 LKKDPLDFALWKAVKPGEPSWDSPWGCGRPGWHIECSVMSQKLLGDTFDIHAGGEDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE+E +QS      +  A  W+HNG +   G KMSKS GN   + E +  K++G     
Sbjct: 235 HHEDEKSQSEALTG-KPFARYWMHNGMIITRGDKMSKSIGNVFLVREAV--KRYG----- 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTE-----AEILLS-----------KWPQTSTSKGII 347
              ++L +L  HYR PI+F+ + + E      ++L +           K P+       I
Sbjct: 287 KDAVKLFLLSKHYRTPIEFSDEIMMENKKAALKVLKTLNRFEEKYPYPKVPKRDEYMNDI 346

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHIL-- 392
           +   + AL +D NT  AI  +  L++E  K  D             +  +F +   +   
Sbjct: 347 EQKFVEALEDDFNTPKAIALIFDLSKELNKAMDEGKDDEALKRYHLITRVFGSILGLFEG 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           G+++ +    +N +  IE++++ R    K K F +AD IR  L
Sbjct: 407 GVKISE---GENTNKVIEEILKVRQEFRKAKNFEAADKIRDAL 446


>gi|189461692|ref|ZP_03010477.1| hypothetical protein BACCOP_02356 [Bacteroides coprocola DSM 17136]
 gi|189431579|gb|EDV00564.1| hypothetical protein BACCOP_02356 [Bacteroides coprocola DSM 17136]
          Length = 492

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 180/495 (36%), Positives = 262/495 (52%), Gaps = 59/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLTRRKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIQLVEGILKNGYAYESQGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINTTRELDGQQEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A +       W+HN  + + G+KM KS GNF
Sbjct: 233 YLGENFDIHGGGMDLIFPHHECEIAQS-VASQGHDMVRYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
           IT++E    + K   +++ A  IR  +L  HYR  +DF+ + L  AE  L +        
Sbjct: 292 ITLDEFFTGSNKLLTQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLERMMEGVKNL 351

Query: 338 ----PQTSTSKGIIDPAVL-----SALYNDLNTVSAIQALHKLAR--------ESTKNHD 380
               P  +TS   I+PA L      A+ +DLNT   I  L    R        ++T + D
Sbjct: 352 ERITPSKTTSG--IEPAGLREKCYEAMNDDLNTPIVISHLFDAIRMINTVIDKKATISAD 409

Query: 381 LLPIFNASAH-----ILGIEVCKEH---LNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
            L    +  H     ILG++   E+     +     ++ L+++R+     K ++++D IR
Sbjct: 410 DLEELKSVFHTFVFDILGLKAEAENNAAREEAFGKVVDMLLEQRMQAKANKDWATSDKIR 469

Query: 433 KQLESKGFILEDYKN 447
             L + GF ++D K+
Sbjct: 470 DTLAALGFEVKDTKD 484


>gi|55980862|ref|YP_144159.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|61216139|sp|Q5SJV9|SYC_THET8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55772275|dbj|BAD70716.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 480

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 173/492 (35%), Positives = 256/492 (52%), Gaps = 75/492 (15%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+TL R+   F+   P ++ +YVCGPTVY   H+G+AR  +V+DVL R L  + G K V
Sbjct: 5   IYDTLARRKVPFEPAVPGHVGIYVCGPTVYADPHLGHARGPVVYDVLRRYL-LHKGYK-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +V NITD+          +DKI+ RA+ E    P+      +  K T  +      L  
Sbjct: 63  RFVSNITDVGHLTDDADEGEDKIVRRAKLERLE-PME-----VAEKYTWSYFDAMQALNV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L P+  PRA+ HIP+M+ L + ++  G AYE    + F   S P YG  S ++++E + G
Sbjct: 117 LRPSIAPRASGHIPEMLELTERLLARGVAYERKGSVYFRVRSFPEYGKLSGKRLEELRAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            RV  +  K++P DF LWK +   EPG    W+SPWG G PGWHIEC+AMS  YLG+ FD
Sbjct: 177 ARVEVREEKEDPLDFALWKAA---EPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGFD 233

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H GG+DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++LL
Sbjct: 234 LHAGGIDLQFPHHECEIAQAEAAGF--RFARHWMHHNHVLLEGEKMAKSTGNLVLLHDLL 291

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKW----------- 337
           E  +          +R  +L THYR P+DFT + L  A+     LL  +           
Sbjct: 292 EAHE-------PMALRFYLLQTHYRSPMDFTWEGLESAKRGYGRLLHAYREVRGRKKTAP 344

Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
               P+   +   ++ A + A+ +DL+T  A+ AL     E    H LLP   A + +  
Sbjct: 345 PGTTPELERALDALEKAFMEAIEDDLSTPEALAALFAFLPEL---HKLLPEAKAES-LAR 400

Query: 394 IEVCKEHLNKNI-SIAIEKLVQERLI-----------------LLKMKKFSSADYIRKQL 435
            E     L + I  +  E++++ER+                    + K +  +D IR++L
Sbjct: 401 AEAVFHTLGEGILGLFPERVLEERVSGPLLEGLIALLLELREEARRAKDYEKSDLIRERL 460

Query: 436 ESKGFILEDYKN 447
            + G I+ED K 
Sbjct: 461 RALGVIVEDTKE 472


>gi|150003580|ref|YP_001298324.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|187629793|sp|A6KZ38|SYC_BACV8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149932004|gb|ABR38702.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 493

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 177/494 (35%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           I ++E    T K   +++    IR  +L  HYR  +DF+          ++RLTEA   L
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351

Query: 335 SK---WPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            +     QT+  +G+ D      +A+ +DLN+   I  L   AR        ++T + + 
Sbjct: 352 ERITPATQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAED 411

Query: 382 LPIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           L    +  H+   E+   KE    N          ++ L+++R+     K ++++D IR 
Sbjct: 412 LEELKSMFHLFMYEILGLKEEAANNEAHEEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471

Query: 434 QLESKGFILEDYKN 447
           +L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKD 485


>gi|254881192|ref|ZP_05253902.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|254833985|gb|EET14294.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
          Length = 493

 Score =  271 bits (692), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 177/494 (35%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           I ++E    T K   +++    IR  +L  HYR  +DF+          ++RLTEA   L
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351

Query: 335 SK---WPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            +     QT+  +G+ D      +A+ +DLN+   I  L   AR        ++T + + 
Sbjct: 352 ERITPATQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAED 411

Query: 382 LPIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           L    +  H+   E+   KE    N          ++ L+++R+     K ++++D IR 
Sbjct: 412 LEELKSMFHLFMYEILGLKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471

Query: 434 QLESKGFILEDYKN 447
           +L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKD 485


>gi|257077300|ref|ZP_05571661.1| cysteinyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 456

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 167/475 (35%), Positives = 249/475 (52%), Gaps = 48/475 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I+NTL +K  +F+ + P  I M+VCGPTVYD +HIG+AR  I FDV+ + LR       V
Sbjct: 3   IHNTLGQKDEDFKPMHPGRINMFVCGPTVYDHSHIGHARTNIFFDVIAKYLRA--RGYSV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++NITDIDDKII RA +E          S +     +++ +   +L   +  +  RA+
Sbjct: 61  FYLQNITDIDDKIINRAAEEGKKY------SEVADHYFEEYKEIMGKLRIDSINYYARAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I ++I  I+ I+ HG+AYE  + + F+     +YG  S + +D+ +   R   K  KK
Sbjct: 115 LYIDEIIGQIKKIMEHGYAYETADGVYFNVRKFSDYGELSNQNMDQIRENARGVIKEEKK 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF+LWK+  P EP WESPWG+GRPGWHIE +A++  Y G  +DIHGGG DLIFPHHE
Sbjct: 175 SPEDFVLWKKMKPGEPFWESPWGKGRPGWHIEDTAITEAYFGSEYDIHGGGNDLIFPHHE 234

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            EIAQ          A  WIH G +N+   KMSKS  NFI   ++L       +S+    
Sbjct: 235 AEIAQMRSVSGKRYLARYWIHTGMVNINKEKMSKSLKNFIQTKDIL-------KSYKPEE 287

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGI--IDPAVLSALYN 357
           +R AM+ ++Y   ID++ Q +  ++       I  +K  + ++++G   ID   +   +N
Sbjct: 288 LRFAMINSNYNTVIDYSAQLMESSKDAVERINIFYNKMKELNSTEGSYNIDAEEIINHFN 347

Query: 358 -----DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
                + +T S I+       ++ KN + +    AS  I  +E     LN    I   K 
Sbjct: 348 AVMDKNFDTRSLIREFLAFISDANKNMENISSAAASKLIHIVEYVDSFLN----IIYRKQ 403

Query: 413 VQERLIL----------LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            QE  I+             K ++ +DYIRK+LE     +E     DNG +   W
Sbjct: 404 NQESNIMDIIIDIRNHARSQKDYAISDYIRKKLEENNIYIE-----DNGNKTIWW 453


>gi|312194278|ref|YP_004014339.1| cysteinyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225614|gb|ADP78469.1| cysteinyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 506

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 138/337 (40%), Positives = 193/337 (57%), Gaps = 29/337 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYG 62
            + +Y+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R LL   Y 
Sbjct: 2   SLHLYDTRTRRVRPFEPLRPGHVGVYVCGPTVQSAPHVGHLRSAVAFDLLRRWLLESGY- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYV+N+TDIDDKII  A +E  S+        + ++ T+ F      +  L PT Q
Sbjct: 61  --AVTYVQNVTDIDDKIIVNADREGVSV------WELATRETRSFDDAYRAVGILPPTIQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+M  LI  ++  G+AYE +  + F      +YG+ S ++ D  +    V  +
Sbjct: 113 PRATGHIPEMFALIGELMAAGYAYEGDGSVWFRVGRFGDYGALSNQRPDAMQASAEV--E 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W+SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 171 AGKEDPRDFALWKAARPGEPAWDSPWGSGRPGWHLECSAMAGKYLGDVFDIHGGGLDLVF 230

Query: 243 PHHENEIAQSCCADRIE--------KTANIWIHNGFLNLEGRKMSKSNGN-FITINELLE 293
           PHHENE AQ+ CA            + A  W+H G L   G KMSKS GN F   + L +
Sbjct: 231 PHHENERAQTVCASAARAHDGSGEPEMARYWMHVGLLTTGGTKMSKSLGNSFFVTDALAQ 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            +          V+R  +L  HYR  ++++   L E+
Sbjct: 291 VRP--------QVLRYHLLSAHYRSSLEYSPDALAES 319


>gi|291515561|emb|CBK64771.1| cysteinyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 491

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 259/493 (52%), Gaps = 55/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  K+ +YNTL R+   F+ + P  + MYVCGPTVY   H+G+ARP + FD+L+R L+  
Sbjct: 1   MDSKLVLYNTLTRRKEVFEPLVPGRVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLKAS 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +    T+++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VAHYYTERYHRA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
              L    P+ +P A+ HI + I  ++ I+  G+AYEAN  + FD    ++  NYG  S 
Sbjct: 113 MDALNVETPSIEPYASGHIIEQIEFVKRILADGYAYEANGSVYFDVEKYNAKYNYGRLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K++  DF LWK+++P     W SPWG G PGWH+ECSAMS+ 
Sbjct: 173 RNLDDIVANTRELDGQSDKRHSYDFALWKKASPEHIMRWPSPWGEGFPGWHMECSAMSTR 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQS  A     +A  W+HN  + + G+KM KS GNF
Sbjct: 233 YLGERFDIHGGGMDLMFPHHECEIAQSTAA-LGHDSARYWLHNNMMTVNGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ E    +     +++    IR  +L  HYR  +DF+ + L  AE  L +  +   + 
Sbjct: 292 ITLEEFFTGSHPKLSQAYSPMTIRFFVLQAHYRSTLDFSNEALQAAEKGLDRLMKGIETL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHKLARESTKNHD----------- 380
           G I PA +S             A+ +DLN+   I AL    R   +  D           
Sbjct: 352 GKIKPAEVSTVDPAELETRCAEAMDDDLNSPMVISALFDWVRTINQLADGSQTITAADLA 411

Query: 381 --LLPIFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                +   +  ILG+   K     +    ++  +E L+ ERL     K ++++D IR  
Sbjct: 412 ALTATVRRYAFDILGLRDEKAAGTASGRDYVTPLVEMLLDERLKARAAKDWAASDRIRDG 471

Query: 435 LESKGFILEDYKN 447
           L + G  ++D K+
Sbjct: 472 LTAAGIRVKDRKD 484


>gi|237711499|ref|ZP_04541980.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229454194|gb|EEO59915.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 493

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 176/494 (35%), Positives = 265/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           I ++E    T K   +++    IR  +L  HYR  +DF+          ++RLTEA   L
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351

Query: 335 SKWPQTSTSKGI-----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            +   ++ + GI     +     +A+ +DLN+   I  L   AR        ++T + + 
Sbjct: 352 ERITPSAQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAED 411

Query: 382 LPIFNASAH-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           L    +  H     ILGI+      E   +     ++ L+++R+     K ++++D IR 
Sbjct: 412 LEELKSVFHLFMYKILGIKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471

Query: 434 QLESKGFILEDYKN 447
           +L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKD 485


>gi|284929429|ref|YP_003421951.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809873|gb|ADB95570.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 482

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 170/489 (34%), Positives = 249/489 (50%), Gaps = 72/489 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R    F  ++ + ++MY CG T YDF H+G+AR  I++D +   L +   E  V
Sbjct: 4   IYNTLTRTKEPFITLEEARVKMYCCGITTYDFCHLGHARTCIIWDTVRNYLEWIGYE--V 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N TD+DDKI+ RA +E  ++        +++K    + +D  RL     +  PR T
Sbjct: 62  KYVQNFTDVDDKILSRAIKEKTTMEE------VSNKFINAYFEDMERLNVKKASVYPRVT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP---- 180
           + I  +  LI  +   GHAY +  ++ FD  S  +YG  S RK+++ K G   RV     
Sbjct: 116 HIIDDIQNLIGELEKSGHAYLSEGDVYFDIKSYKDYGKLSGRKLEDLKAGASGRVSLEDF 175

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +K  K++PADF +WK++ P E  W+S WG+GRPGWHIECSAM    LG+  D+H GG DL
Sbjct: 176 QKNKKRDPADFAVWKKAKPTEKSWDSKWGKGRPGWHIECSAMIKKELGETIDLHVGGSDL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      E  +  W HNG + ++G KMSKS GNF TI ELL+       
Sbjct: 236 IFPHHENEIAQSEAITGKE-LSRYWSHNGMVKVDGEKMSKSLGNFTTIRELLD------- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
            +   V+RL +L THYR P+DF+   L  A    + W   + S G++             
Sbjct: 288 QFEPMVVRLFILQTHYRNPLDFSHNSLVAA---TNSWQ--TLSDGLLFGYQYGEKLNFKN 342

Query: 348 DPAV----------LSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
           +PA             A+ +D N    +  L ++A+   K  ++L               
Sbjct: 343 NPATELLPDLVNRFKKAINDDFNFAGGLAVLFEIAKNLRKESNVLTHTGVTTLSSNFLET 402

Query: 384 ---IFNASAHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 + A +LG+E  +     E   K     I++LV++R I    K++  +D IR +L
Sbjct: 403 QWHTLKSLAKLLGLEANQTTLKIELFKKLTDEEIDELVKKRKIAKNAKQYKESDLIRDKL 462

Query: 436 ESKGFILED 444
           +     L D
Sbjct: 463 KENNITLLD 471


>gi|315654539|ref|ZP_07907445.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
 gi|315491003|gb|EFU80622.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
          Length = 506

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 167/505 (33%), Positives = 256/505 (50%), Gaps = 91/505 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRR--GY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+  A+     +P  +    + +   ++F      L  L PT  P 
Sbjct: 59  AVTYVRNVTDIDDKIL--AKSAAAGVPWWE----LAAHFEREFDFAYRALNTLPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-------DEQKMG 176
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + +       DE ++ 
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELVSTEDESQID 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           T    +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDI
Sbjct: 173 TAT--EVGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDI 230

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE
Sbjct: 231 HGGGLDLRFPHHENEMAQSHGAGW--GFARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLE 288

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------- 337
                   W   V+R++++ THYR  ++++   L +A +L  K+                
Sbjct: 289 -------DWNPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLQQVPRSVPAGAG 341

Query: 338 -PQTSTSKGIIDPAV---------------LSALYNDLNTVSAIQALH---KLARESTKN 378
            P+     G ++P +               ++AL +DLN   A+ ALH   K  + +  +
Sbjct: 342 APEVCNIYGDVEPDLARQRELTAVELPDDFVAALDDDLNVPGALPALHRALKTGKAALNS 401

Query: 379 HD-------------LLPIFNASAH----ILGIEVCK---------EHLNKNISIAIEKL 412
            D             +L +F    H    +  +   +         +  N +++  +  L
Sbjct: 402 GDTSGAQQAALQLRAMLDVFGLDPHDPAWVASVSATETPGTAPSPTDTPNDSLTSLVTAL 461

Query: 413 VQERLILLKMKKFSSADYIRKQLES 437
           +Q+R      + +  AD IR  L++
Sbjct: 462 LQQRAEAKAQRDWGRADAIRDLLQT 486


>gi|301167823|emb|CBW27408.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 487

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 189/323 (58%), Gaps = 16/323 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R   EF+ +    +++Y+CGPTVYD  HIGN R  I F+++   L     + 
Sbjct: 3   LKIYNTLSRSKEEFKPLVEGKVKLYLCGPTVYDLLHIGNFRGAITFNLVRNWLELSGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V N TD+DDKII+RA  E    PI     +I+ K   +F KD  RL     TH P+
Sbjct: 62  -VTFVYNYTDVDDKIIKRANDEGVE-PI-----VISEKYIAEFEKDFNRLGLKKHTHNPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  ++ +I +  AYE + E+ +   +  +YG  S++ +DE   G RV     
Sbjct: 115 VTEFMDEIINYVETLIKNDKAYEIDGEVFYAIDNYTDYGKLSKKNLDELNAGQRVEVDSR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM    LG+  DIHGGG+DLIFPH
Sbjct: 175 KRNPYDFVLWKPSKEGEPHWTSPWGEGRPGWHIECSAMIKAILGETIDIHGGGIDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ    +   K  N W+HN F+NL+  KMSKS GN IT    ++        +  
Sbjct: 235 HENEIAQGEGCN-CTKYCNYWMHNEFINLKDEKMSKSLGNVITGRAFMD-------QYHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRL 327
            V++  ML  HYR   + T +++
Sbjct: 287 EVLKFLMLSAHYRSNFNVTDEKI 309


>gi|171912658|ref|ZP_02928128.1| cysteinyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 520

 Score =  270 bits (691), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 170/479 (35%), Positives = 254/479 (53%), Gaps = 51/479 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++TL R   E    +   +R Y CGPTVY  AHIGN R  I  DV  R++      
Sbjct: 48  RLQLHDTLTRTAREVWPSEAGTLRFYGCGPTVYGPAHIGNFRTFIAQDVFRRVVEL--SG 105

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
               +VRNITD+DDK I  +++          +   T   T++F  D   L  L P  +P
Sbjct: 106 TPTLHVRNITDVDDKTIRDSQK------AGQTLLEFTRYWTERFHADCAALNLLPPHVEP 159

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
           +AT+HI   I +I+++I HG+AY A +  + F  SS  +YG  S  +  E K+G      
Sbjct: 160 KATDHIAHQIKMIEDLISHGNAYAAPDGSVYFRVSSYADYGKLSHLEDRELKVGAAQTAN 219

Query: 180 -PEKYHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             ++Y K + ADF LWK  ++   E  WESPWG+GRPGWH+ECSAM+  YLG  FD+H G
Sbjct: 220 DSDEYTKDSLADFALWKAHKTDDGENFWESPWGKGRPGWHLECSAMALEYLGVEFDLHSG 279

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL+FPHHENEIAQSCCA    + A  W+H   L ++G KMSKS GN  T+ +L     
Sbjct: 280 GIDLVFPHHENEIAQSCCATG-GRFARHWMHIAHLMVDGGKMSKSLGNLYTLADL----- 333

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT---EAEILLSKWPQT------------- 340
            G R +   V+R  +L  HYR+P++FT+  L    +A + L+K+ +              
Sbjct: 334 -GHRGYSPAVVRYTLLSGHYRQPLNFTLHSLDASHQALLKLAKFEKQLRALTQASEAPSL 392

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALH---------KLARESTKNHDLLPIFNA 387
               +T K  I     + L NDLN   AI A+           L+ E+ K+  +   F  
Sbjct: 393 DELKATGKADIFAEAWADLLNDLNVPGAIGAVFATLNKTKPAALSVEAAKSAWIGLHFVL 452

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +A  L + V K+         ++ L  +R    + + ++++D +RKQ+E  G+I++D K
Sbjct: 453 AALGLELPVIKDEGEVEAPEEVKALADQRWNAKQARDWTTSDDLRKQIELLGWIVKDSK 511


>gi|241895151|ref|ZP_04782447.1| cysteinyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871647|gb|EER75398.1| cysteinyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 471

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 175/491 (35%), Positives = 250/491 (50%), Gaps = 56/491 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT+      F  I    I MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   IKMFNTMTLAKEPFHPIHDDTINMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYR--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++  ++P       +  K    F +DT  L     T +PR
Sbjct: 60  TVNYVSNFTDVDDKMIKAAAEQGITVPE------LADKYIAAFNEDTAALNIKPATVRPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTRV--P 180
           AT HI Q+I  + ++I  G+AYE+  ++ +      NYG+ + + + E       R+   
Sbjct: 114 ATEHIAQIIDFVADLIDKGYAYESAGDVYYRAKKFHNYGALAHQDLAEMTSNAAGRLNDE 173

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK  +      WESPWG+GRPGWHIECS MS+ YLG  FDIHGGG+D
Sbjct: 174 ELERKEDPMDFAVWKGENGDGAIAWESPWGKGRPGWHIECSVMSTKYLGNHFDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHH NEIAQS      EK  N W+HNGF+ +  E  KMSKS GNF+T+++LL+    
Sbjct: 234 LAFPHHTNEIAQSEVHTG-EKFVNEWLHNGFVTVGDENEKMSKSLGNFVTVHDLLQQID- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------WPQTSTSKG 345
                   V+R  M  T YR  I ++   +T+A   L +                +  + 
Sbjct: 292 -----DPMVLRFFMATTQYRRSIAYSESNMTQAAHNLDRIRTGYRNLAFRLTDAVAGDES 346

Query: 346 IIDPAVL-------SALYNDLNTVSAIQALHKL--------ARESTKNHDLLPIFNASAH 390
           +ID           +A+ +D N  +A+ A+++L        A E      +  I +    
Sbjct: 347 LIDDKASELVVQFNTAMDDDFNAPNALTAIYELVDLANQYAATEVVYQDTVNFILDKITV 406

Query: 391 ILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           ++ I  V     ++ +   IE L+QER      K F+ +D IR  L  +G ILED   P 
Sbjct: 407 LMSIFGVDGLSDDELLDDDIEALIQERNDARTNKNFARSDEIRDSLAEQGIILED--TP- 463

Query: 450 NGQRMTRWKQK 460
              + TRW +K
Sbjct: 464 ---QGTRWHRK 471


>gi|296392881|ref|YP_003657765.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296180028|gb|ADG96934.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 467

 Score =  270 bits (690), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 155/474 (32%), Positives = 237/474 (50%), Gaps = 49/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + EF  + P  + +Y+CG TV    H+G+ R  +VFDVL R L     + 
Sbjct: 3   LRLYDTRTRVVREFAPLRPGQVSVYLCGATVQGKPHVGHLRSAVVFDVLRRWLLAKGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A +               + + ++F     RL  L P+ +PR
Sbjct: 62  -VLFIRNVTDIDDKILAKAAE------AGRPWWEWAATHEREFSNAYNRLGVLPPSAEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM   I+ +I  GHAY    ++ FD  S+P YG  S  + D+   G        
Sbjct: 115 ATGHITQMTTCIERLIERGHAYTGAGDVYFDVRSLPEYGKLSGHQPDDVHQGESA--GAG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W +PWG GRPGWH+EC+AM++ YLG  FDIH GG+DL+FPH
Sbjct: 173 KRDPRDFTLWKGSKPGEPWWPTPWGPGRPGWHLECTAMATAYLGSEFDIHCGGMDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQ+  A   ++ A  W+HNG+L+L G KMSKS GN +++ ELL   +        
Sbjct: 233 HENELAQAHGAG--DQFARFWLHNGWLSLGGEKMSKSLGNVLSLEELLTAVR-------P 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSAL 355
             +R  +   HYR   +F+++ + EA +   +                 G +     SAL
Sbjct: 284 QELRYYLGCAHYRSTQEFSIEAVVEAAVAYQRLESFVLRAAEQFGEIPVGQVADEFASAL 343

Query: 356 YNDLNTVSAIQALHKLARESTKN---------------HDLLPIFNASAH----ILGIEV 396
            +DL    A+  L + A++                     +L +            G E 
Sbjct: 344 DDDLAVPKALAELQRQAKQGNTELADADPAAAATAASVRAMLAVLGCDPFDPMWASGRER 403

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            ++   + + + +E  +  R      K +++AD +R +L   G I+ D   PD 
Sbjct: 404 EEKAAFRAVDVLVEAELSRREAARAGKDWATADDVRDRLRKAGIIVTD--GPDG 455


>gi|37520420|ref|NP_923797.1| cysteinyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|61216274|sp|Q7NMB5|SYC_GLOVI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|35211414|dbj|BAC88792.1| cysteinyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 482

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 173/499 (34%), Positives = 254/499 (50%), Gaps = 68/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           ++IYNTL R+   F  ++   ++MYVCG TVYD+ H+G+ R  +V+D + R L  R Y  
Sbjct: 3   LQIYNTLTRRKEPFVPLEAGTVKMYVCGVTVYDYCHLGHGRTYVVWDTVRRYLISRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYV+N TD+DDKI+ RA+QE  ++        +  K    + +D  RL  L     
Sbjct: 61  --AVTYVQNFTDVDDKILRRAQQEGTTM------EAVAEKYIAAYFEDMDRLNVLRADSY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
           PRAT  +P++  LI  +   G+AY A  ++ +       YG  S +++ E + G     +
Sbjct: 113 PRATQTMPEIGALIDRLTSIGYAYPAAGDVYYSVRRFAEYGKLSGKRLAELEAGASERLQ 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   KK+P DF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DEELARKKDPFDFALWKGAKPGEPAWDSPWGAGRPGWHIECSAMVRKSLGETIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLE 293
           DL FPHHENEIAQS      +  A  W+HN FLN+        KMSKS GNF T+ +L E
Sbjct: 233 DLQFPHHENEIAQSEAVTG-KPLARYWMHNAFLNVVNSSGAEEKMSKSLGNFKTLRDLFE 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ---------RLTEAEILLSKW----PQT 340
                   +P   +RL +L T YR PI F+ +         R  E  + L+ W     + 
Sbjct: 292 V-------FPPMALRLFLLKTSYRNPIAFSAEAFKGSEQNWRELEEVLQLAGWIAGQGRP 344

Query: 341 STSKGIIDPAVL---SALYNDLNTVSAIQALHKLARE-STKNHDLL---PI--------- 384
           +T     +P V     A+ +D NT +A+  +  L ++ + + H  +   P+         
Sbjct: 345 ATDDIESEPWVRRFNEAMDDDFNTAAALAEVIALGKQLAGRYHAAIHGTPLADPARFARE 404

Query: 385 ---FNASAHILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
              F     ILG++  +    ++      IE  +  R    + + ++ AD IRKQL  +G
Sbjct: 405 WRTFALLCDILGLKAAEPEARQSALPEAEIEAQIALRRQAREERNWAEADRIRKQLLDQG 464

Query: 440 FILEDYKNPDNGQRMTRWK 458
            +L D+K     ++ T W+
Sbjct: 465 IVLIDHK-----EKPTTWR 478


>gi|167764089|ref|ZP_02436216.1| hypothetical protein BACSTE_02472 [Bacteroides stercoris ATCC
           43183]
 gi|167698205|gb|EDS14784.1| hypothetical protein BACSTE_02472 [Bacteroides stercoris ATCC
           43183]
          Length = 491

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 180/492 (36%), Positives = 258/492 (52%), Gaps = 54/492 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   I FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILENGYAYESEGSIYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLGK FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGKHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT++E    + K   +++    IR  +L  HYR  +DF+ + L  AE  L++        
Sbjct: 292 ITLDEFFTGSNKTLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHKLAR--------ESTKNHDLLP 383
             I P   S             A+ +DLN+   I  L   AR          T   + L 
Sbjct: 352 EKIVPGKASTVNVKTLRAECYEAMNDDLNSPIVIAHLFDGARMINNIIAGNDTITAEDLK 411

Query: 384 IFNASAH-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H     ILG++      E         ++ L+ ER+     K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEENTSNEEREAAFGKVVDMLLAERIKAKANKDWATSDKIRDEL 471

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 472 TALGFAIKDTKD 483


>gi|325000166|ref|ZP_08121278.1| cysteinyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 440

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 165/449 (36%), Positives = 239/449 (53%), Gaps = 51/449 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGEKCVTYVRNITDIDDKIIERAR 84
           + MYVCG TV    HIG+ R  + +DVL R L R  Y    VT VRN+TDIDDKI+ ++ 
Sbjct: 1   MSMYVCGATVQGLPHIGHVRSGLNYDVLRRWLGRSGYD---VTLVRNVTDIDDKILRKS- 56

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
            E    P  +      + + + F      L CL P+ +PRAT HI QM+ LI+ +I  GH
Sbjct: 57  -EAAGRPWWE----WAATHERAFTAAYDALGCLPPSVEPRATGHITQMVELIERLIERGH 111

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           AY AN ++ F   ++P YG+ S +K+D+   G    E   K++P DF LWK + P EP W
Sbjct: 112 AYAANGDVYFAVRTMPEYGTLSGQKVDDVHQGEG--EAGDKRDPLDFTLWKAAKPGEPSW 169

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            +PWG GRPGWH+ECSAM++ YLG  FDIHGGGLDL+FPHHENE AQS  A   +  A  
Sbjct: 170 PTPWGHGRPGWHLECSAMATAYLGPEFDIHGGGLDLVFPHHENERAQSHAAG--DPFARF 227

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT 323
           W+HN ++ + G KMSKS GN + I  LL+  +        PV +R  ++  HYR  I+++
Sbjct: 228 WLHNAWVTMGGEKMSKSLGNTLAIEALLQRVR--------PVELRYYLVGPHYRSAIEYS 279

Query: 324 VQRLTEAEILLSKWP----QTSTSKGIIDPAV------LSALYNDLNTVSAIQALHKLAR 373
              L EA     +      +     G+ +P+        +AL +DL T  A+ A+HKL R
Sbjct: 280 DAALDEAVAAYRRVESFVNRVRERHGLPEPSTELPAEFTAALDDDLGTPIALGAVHKLVR 339

Query: 374 ESTKNHD---------LLPIFNASAHILGIE---------VCKEHLNKNISIAIEKLVQE 415
           E     D               A+  +LG++            +   + +   +E +++ 
Sbjct: 340 EGNTALDAGDARTASQAASCVRATTGVLGLDPLAAGGAADNAGDAARQALGTLVESMLER 399

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILED 444
           R      + F++AD +R +L + G  +ED
Sbjct: 400 RQAARARRDFATADRLRDELLAAGIAVED 428


>gi|320535476|ref|ZP_08035582.1| cysteinyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320147668|gb|EFW39178.1| cysteinyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 486

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 174/489 (35%), Positives = 255/489 (52%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +KI EF+ +    +  Y CGPTVY++AHIGN R  +  D+L R L +   + 
Sbjct: 3   LRVYNTLGKKIEEFKPLSGMKVGFYGCGPTVYNYAHIGNLRAYVFQDILTRTLSFLGYD- 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT+V NITD+          +DK+++ A++   S+        I    T+ F  DT RL
Sbjct: 62  -VTHVMNITDVGHLSGDNDEGEDKMVKSAKERGKSV------MQIADYYTKAFFTDTERL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L PT   +AT+HIP+MI LI+ +   GH Y +   + +D S+ P+YG  +   +DE K
Sbjct: 115 NILKPTIVCKATDHIPEMIALIKRLEERGHTYFSEGNLYYDISTFPDYGKMAGFTLDELK 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G RV    +KKNP DF+LW   +  E     W+SPWG+G PGWHIECSAMS  YLG+ F
Sbjct: 175 AGARVAIDKNKKNPHDFVLWFTQSKFENQALVWDSPWGKGYPGWHIECSAMSMKYLGEQF 234

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           +IH GG+D I  HH NEIAQS  A   +     W+HN FL +   KMSKS+G FIT+  +
Sbjct: 235 EIHSGGIDHIRIHHTNEIAQSEGATG-KPWVKYWMHNEFLVMNKGKMSKSSGEFITLQAV 293

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------------------- 331
           ++      + +     R  +L  HYR  + F+ + +  A+                    
Sbjct: 294 ID------KGFDPIDYRFLLLGGHYRSQLTFSWEAMETAKNARKSLQQRIENLKSGIENL 347

Query: 332 ILLSKWPQTSTSKGII--DPAV------LSALYNDLNTVSAIQALHKLAREST-KNHDLL 382
            L+ +    S ++ ++   PA+      + AL +DL+T  AI  + +L ++ T    D L
Sbjct: 348 SLIEEKISASDAEKLLRNSPALPYFESFVQALEDDLSTPRAISEMQQLIKDKTIYAEDRL 407

Query: 383 PIFNASAHILGI---EVCKEHLNKNISIAIEK----LVQERLILLKMKKFSSADYIRKQL 435
              +    I G+   E  K + NK  S   E+    L+QER      K +  AD IR +L
Sbjct: 408 KTLSIFDQIFGLNLFEKSKSNSNKQESAMDEQSILTLIQERTDAKNAKNYQRADEIRDEL 467

Query: 436 ESKGFILED 444
            +KG ILED
Sbjct: 468 RTKGIILED 476


>gi|312138100|ref|YP_004005436.1| cysteine-tRNA ligase cyss [Rhodococcus equi 103S]
 gi|325674996|ref|ZP_08154683.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311887439|emb|CBH46751.1| cysteine-tRNA ligase CysS [Rhodococcus equi 103S]
 gi|325554582|gb|EGD24257.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 469

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 163/478 (34%), Positives = 246/478 (51%), Gaps = 68/478 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           +++Y+T+ R   +F  + P +  +Y+CG TV    HIG+ R  + FDVL R LL + Y  
Sbjct: 3   LRLYDTVTRAPRDFVPLTPGHASVYLCGATVQGEPHIGHVRSGVAFDVLRRWLLAHDYD- 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN+TDIDDKI+ +A +     P  +  +       + F     +L  L P+ +P
Sbjct: 62  --VAFVRNVTDIDDKILNKAAE--AGRPWWEWAATFE----RSFDWAYRQLGVLPPSVEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+ QM+ ++Q +I +GHAY +  ++ FD  S P YG  S  K+D+   G       
Sbjct: 114 RATGHVTQMVEMMQRLIDNGHAYASGGDVYFDVRSFPEYGRLSGHKLDDVHQGESAGAG- 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W +PWG GRPGWH+ECSAM+  YLG+ FDIH GGLDL+FP
Sbjct: 173 -KRDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHLECSAMAVFYLGQAFDIHCGGLDLVFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+ CA   +  A  W+HNG++   G KMSKS GN +++  +L+  +       
Sbjct: 232 HHENEIAQAKCAG--DDFAQYWLHNGWVTKSGEKMSKSLGNVLSVPNVLKLVR------- 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA-------------------EILLSKWPQTSTSK 344
              +R  +   HYR  ++++ + L EA                   E+ + KW +     
Sbjct: 283 PQELRYYLGSAHYRSMLEYSEEALQEAAAGYRRCESFVQRTAERAGEVQVGKWTEE---- 338

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARES-----TKNHD----LLPIFNASAHILGIE 395
                   +AL +DLN  +A+  +H   RE      + + D    L     A   ILG++
Sbjct: 339 ------FAAALDDDLNVPAALAEIHGRVREGNIALESGDADGARALAGQVRAMLGILGVD 392

Query: 396 VCKEHL-----NKNISIAIEKLVQERLILLKM----KKFSSADYIRKQLESKGFILED 444
              E       +     A++ LVQ  L   +     K ++ AD +R +L + G  + D
Sbjct: 393 PLDEQWTAASDDAAAMGALDVLVQAELDRRQQARADKNWAVADEVRDRLAAAGIAVTD 450


>gi|329954112|ref|ZP_08295207.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328528089|gb|EGF55069.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 491

 Score =  270 bits (690), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 178/492 (36%), Positives = 261/492 (53%), Gaps = 54/492 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   I FD +      +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSIYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLGK FDIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGKHFDIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT++E    + K   +++    IR  +L  HYR  +DF+ + L  AE  L++        
Sbjct: 292 ITLDEFFTGSNKTLAQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLTRLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHKLAR--------ESTKNHDLLP 383
             I P   S             A+ +DLN+   I  L   AR          T   + L 
Sbjct: 352 EKITPGKASTVDVKTLRAKCYEAMNDDLNSPIVIAHLFDGARMINNIIAGNDTITAEDLQ 411

Query: 384 IFNASAH-----ILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H     ILG++       +  +     ++ L++ER+     K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEENNSNEEREAAFGKVVDMLLEERIKAKANKDWATSDKIRDKL 471

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 472 TALGFAIKDTKD 483


>gi|283769304|ref|ZP_06342204.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104080|gb|EFC05463.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
          Length = 443

 Score =  270 bits (689), Expect = 4e-70,   Method: Compositional matrix adjust.
 Identities = 173/470 (36%), Positives = 243/470 (51%), Gaps = 60/470 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT   +I EF+      + +YVCGPTVY++AHIGNARPM+VFDVL R+     G K
Sbjct: 1   MKLYNTKTLEIEEFKPRKEGEVSLYVCGPTVYNYAHIGNARPMVVFDVLKRVFEAI-GLK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E  S         I ++  Q +     +L    P H PR
Sbjct: 60  -VNYVSNYTDVDDKIIHKALEEGVSE------EEIANRYIQAYEDLRKQLNIEQPDHCPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  +I  I+ +   GHAYE N ++ F   S+  YGS S + ++E   G R+ E   
Sbjct: 113 VTHTMDSIISFIKGLQDQGHAYEVNGDVYFSVDSVSEYGSLSHQNLEELDAGNRIAENEQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+ T     WESPWG+GRPGWH EC  M +  LG+  DIHGGGLDL FPH
Sbjct: 173 KKNPLDFTLWKK-TDKGIQWESPWGKGRPGWHTECVVMINENLGQTIDIHGGGLDLKFPH 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ       E  A+ W+HN  +N++G KMSKS GN  T+  +  TK+ G      
Sbjct: 232 HENEAAQQRAMFGHE-LADHWMHNAMVNIDGEKMSKSLGN--TLWAMDVTKELG-----T 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-----EILLS--------KWPQTSTSKGIIDPA- 350
            + R  +   HYR+ ++F+ + +  A     +IL++        K+     +  +  P+ 
Sbjct: 284 NLTRWLISSVHYRKELNFSDETIQAAKTELEKILMAVHNATLKVKFADVEWNFSVDTPSF 343

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--------AHILGIEVCKEH 400
              +  + NDLNT +A   + +  +E           NAS          I+G+    E 
Sbjct: 344 DRFIKQMENDLNTPNAYTVIFETVKE----------LNASIRQKEPDYTRIMGLVNSIEK 393

Query: 401 LNKNISIAIEKLV---------QERLILLKMKKFSSADYIRKQLESKGFI 441
           +   + I +EK+V         Q  L   K + F  AD  R  L+ KG I
Sbjct: 394 MMDVLGIKLEKVVVSKEDKQIYQAWLAAKKERNFDQADQYRNILQEKGLI 443


>gi|317404801|gb|EFV85180.1| CysS protein [Achromobacter xylosoxidans C54]
          Length = 484

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 174/496 (35%), Positives = 251/496 (50%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+      +RMYVCG TVYDF H+G+AR ++ FDV+ R LR      
Sbjct: 2   LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRA--SGL 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L   +P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEFYIAAMHADERALGVASPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY+A++ ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGKLEQKGLAYQADDGDVNYAVRGFEGYGKLSGKTLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKEEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------E 293
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI + +       +
Sbjct: 234 KFPHHENEIAQTEGA-FGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQGEPAAD 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGII- 347
           T  +      A ++R  ++  HYR P ++T   L +A+  L +  Q      +  +GI  
Sbjct: 293 TADYRVNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVPADDQGIDW 352

Query: 348 -DP---AVLSALYNDLNTVSAIQALHKLARESTKNH--------------------DLLP 383
            +P   A  +A+ +D N+  A+ AL +LA E+ +                      D   
Sbjct: 353 NEPQAQAFKAAMDDDFNSSGAVAALFELASEANRGKSARSAGQLKALGGLLGLLQQDPAA 412

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            F +S       + +    +  + AI+ L+  R      + F+ AD IR +L   G  L+
Sbjct: 413 YFQSSTRYSAAGMEQGARAELDAAAIQALIDARAAAKAARDFAQADRIRAELREAGIELD 472

Query: 444 DYKNPDNGQRMTRWKQ 459
           D         +T+W++
Sbjct: 473 DKPGG-----LTQWRR 483


>gi|330470432|ref|YP_004408175.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328813403|gb|AEB47575.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 471

 Score =  270 bits (689), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 177/479 (36%), Positives = 254/479 (53%), Gaps = 62/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L     E 
Sbjct: 3   LRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAAGFE- 61

Query: 65  CVTYVRNITDIDDKIIERAR-QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT++RN+TDIDDKI+ +A+ QE P          I   N  +  +    L  L PT++P
Sbjct: 62  -VTFIRNVTDIDDKILIKAQEQERP-------FWSIAYANELKLAEAYRALNVLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           RAT HIP+M  LI  +I  GHAY A ++   + FD  S P YG+ S +  DE +     P
Sbjct: 114 RATGHIPEMHQLIAQLIERGHAYPATDDSGDVYFDVRSWPAYGALSNQSPDEMQSAADAP 173

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           E+  K++P DF LWK   P EP    W SPWG GRPGWHIECSAM   YLG  FDIHGGG
Sbjct: 174 ER-GKRDPRDFALWKGVKPGEPADAYWPSPWGLGRPGWHIECSAMCWRYLGAEFDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDLIFPHHENE+AQS  AD     A  W+H+G L + G KM KS GN +   +L      
Sbjct: 233 LDLIFPHHENELAQSQAADL--PFARYWVHHGLLGIGGTKMGKSLGNAL---DLAYVAGL 287

Query: 298 GGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWPQTSTSK------GII 347
           G R    PV +R   +  HYR  ID++ + L EA +    +  + Q S  +      G +
Sbjct: 288 GVR----PVELRYYYVAAHYRSRIDYSEEALREAAVAYRRIEGFVQRSVERVGVGQLGEV 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARES----TKNHDL-----LPIFNASAHILGIEV-- 396
             A  +A+ +DLNT +A+  LH + R+         D+     L    A   ILG++   
Sbjct: 344 PAAFAAAMDDDLNTSAALAVLHDVLRDGNNALAGGDDVTVRTALASVRAMLDILGVDPLD 403

Query: 397 -----------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                       +  ++  +++A+E+  Q R+     K +++AD +R QL+  G ++ED
Sbjct: 404 PAWTGGARASDLRGVVDSLVALALEQRAQARV----RKDWAAADALRDQLKRAGVVVED 458


>gi|118431525|ref|NP_148045.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|150421675|sp|Q9YBK6|SYC_AERPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116062850|dbj|BAA80592.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 472

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 176/505 (34%), Positives = 254/505 (50%), Gaps = 83/505 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL R+   F    P  + MYVCGPTVYD+ HIG+AR   VFD + R LR    + 
Sbjct: 2   IRVFNTLGRRKEVFNPYSPPLVGMYVCGPTVYDYTHIGHARTFTVFDAIKRYLRLRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR-----LACLAP 119
            V +V+NITDIDDKII RAR+E               ++ ++ V++ +R     L  L  
Sbjct: 61  -VFHVQNITDIDDKIINRAREE--------------GRDWREIVREYSRDYLEGLGSLGI 105

Query: 120 T--HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
              H PR T+HI  +I  I+ +I  G+AY A +  + F+    P YG  S   + ++   
Sbjct: 106 QIDHHPRVTDHISDIIRFIEGLIEKGYAYVAESGSVYFEVDKYPGYGMLSG-HLSKEAWR 164

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                 + KK+P DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG   DIHGG
Sbjct: 165 QEEDVLHEKKSPYDFALWKAAKPGEPSWESPWGRGRPGWHIECSVMSSRYLGSRIDIHGG 224

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL+FPHHENE AQS       +    W+H  +L ++G KMSKS GN I + E L    
Sbjct: 225 GVDLVFPHHENERAQSESYFG-HRWVRYWLHASYLTIKGEKMSKSLGNIIPLREAL---- 279

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGI 346
              R W    +RL +L +HYR  +D++ + L +   L  +  Q + S          KG 
Sbjct: 280 ---REWGPGPLRLWLLSSHYRSNLDYSEEALGQYRRLYERLRQAADSIGRRLERAEPKGR 336

Query: 347 IDPAVL--------------SALYNDLNTVSAIQALHKLAR------ESTKNHDLL---- 382
           +    L               A+ +D N   A+ +L +         E T+++ LL    
Sbjct: 337 LGEGELETVERLKGVVRRWHEAMSDDFNMGKAMSSLWEFTTIYFREVEQTESYTLLWLSW 396

Query: 383 -------PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   ++  +  I+     +  L  ++   ++ LV  R  L + K +  AD IR +L
Sbjct: 397 RILTGFNSVYAFAPDIVEARRPERSLEDSL---VQALVDVRSELRRRKMYDLADEIRSRL 453

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
              GF+L      D G++ T W+++
Sbjct: 454 AQLGFVLH-----DKGEK-TEWRRR 472


>gi|150401798|ref|YP_001325564.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187631641|sp|A6UWT0|SYC_META3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150014501|gb|ABR56952.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 479

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 175/487 (35%), Positives = 242/487 (49%), Gaps = 65/487 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +KIYNT  +    F+ I+    I+MYVCGPTVYD AH+G+ R  + FD++ R L +    
Sbjct: 1   MKIYNTASKNKETFKTINNKKLIKMYVCGPTVYDHAHLGHGRTYVAFDIIRRYLEH--KN 58

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  + N TDIDDKII RA ++  +I        ++ K    F++D  +L        P
Sbjct: 59  YIVQLIINFTDIDDKIINRANEQGTTIKE------LSDKFINSFLEDMEKLNVKPALIYP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R + HI ++I  I+ +   G+AY   + + FDTS    YG   +  I E+    +     
Sbjct: 113 RVSEHINEIIEFIKVLEKKGYAYATADGVYFDTSKYEKYGELRKINIKEE-TSEQKNINI 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKN  DF LWK + P EP W+SPWG GRP WHIECSAMS  YLG  FDIHGGG DLIFP
Sbjct: 172 NKKNQRDFALWKFAKPDEPKWDSPWGEGRPAWHIECSAMSLKYLGDNFDIHGGGCDLIFP 231

Query: 244 HHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENE AQS C  D+  K  N WIH GF+ +   KMSKS GNF T+ +L E        +
Sbjct: 232 HHENEKAQSECYTDK--KWVNYWIHTGFVMVNNEKMSKSLGNFSTLKDLFE-------KY 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------IDP 349
            A +IR  +L  HY  P+D+T   +  ++  L K   T  +  +             ID 
Sbjct: 283 SAELIRFFLLERHYSSPLDYTEDAINHSKNNLDKLYNTIQNITVAFRNSEIKYKLNEIDK 342

Query: 350 AVLSALYN-----------DLNTVSAIQALHKLARESTK------NHDLLP--------- 383
             +  ++N           + NT  A++ + +++    K      N D LP         
Sbjct: 343 NTIETIHNCTEKFYTAMDDNFNTAQALKYVFEVSTAINKYINNYANSDELPNYSIILKSY 402

Query: 384 -IFNASAHILGI---EVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLES 437
             F     I GI          N NI+    I  L++ R  L K K ++ +D IR +L+ 
Sbjct: 403 EFFKMVGEIFGIFGSSTINTATNTNIAEENLINILMELRADLKKEKNYNLSDKIRDKLKE 462

Query: 438 KGFILED 444
              ILED
Sbjct: 463 MDIILED 469


>gi|16082163|ref|NP_394604.1| cysteinyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|21264025|sp|Q9HJ27|SYC_THEAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|10640458|emb|CAC12272.1| probable cysteinyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 452

 Score =  269 bits (688), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 166/465 (35%), Positives = 246/465 (52%), Gaps = 46/465 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL R + EF+ ++   I M+VCGPTV D  HIG+AR  I FD + +LLR      
Sbjct: 1   MRFYNTLTRDVDEFKEMNSGRINMFVCGPTVQDHFHIGHARTYIFFDAVAKLLRNL--GY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII +AR+      +N     +     ++F++D + L   +  +  +
Sbjct: 59  SVFYLQNITDIDDKIINKARE------MNIQPQDVADMYLREFLEDMSALKVTSVNYFAK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           +T +I ++I  I  +I  G+AYE ++ + F+ S   +YG  S + +D+   G RV    +
Sbjct: 113 STLYINEIISQISRLIEKGYAYETSDGVYFEVSKFADYGQLSNQSLDQIIHGYRVAVNEN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK+  P EP W+SPWG GRPGWHIE +A++  Y G  +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKRKPGEPYWDSPWGPGRPGWHIEDTAITETYFGPEYDIHGGGSDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ       +  ++ WIH G +N+   KMSKS  NF+TI E+L       + +  
Sbjct: 233 HEAEIAQMRAISGRKYLSHYWIHTGMINVNNEKMSKSLKNFVTIREVL-------KEYRP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG----IIDPA-----V 351
             +R A+L  +YR  +DF+   L E+    E L S + +   + G      DP+     +
Sbjct: 286 EDLRYALLNANYRTQLDFSKGLLEESRKQVEYLNSTFRKLVNASGNSDLSADPSAVIKRM 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH------------DLLPIFNASAHILGIEVCKE 399
           +    ND +  S  + L   A +  KN             D+    ++ A IL  E  + 
Sbjct: 346 VDEATNDFDFRSVFRDLIDFAGDLNKNIESISRPAAQKAIDVFRWVDSFAGILLPETAR- 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                +S  I+ L+  R  L   +KF  AD IR  L   G  +ED
Sbjct: 405 -----LSGIIDDLLDLRKNLRTERKFQEADRIRDLLLKNGIHVED 444


>gi|293606585|ref|ZP_06688941.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
 gi|292814970|gb|EFF74095.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
          Length = 484

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 178/496 (35%), Positives = 256/496 (51%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+      +RMYVCG TVYDF H+G+AR ++ FDV+ R LR      
Sbjct: 2   LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRA--SGL 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +  +  I  +T         D   L   +P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETSRRIGDVTDFYIAAMHADEQALGVESPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +  +G AY+A++ ++ +     P YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGKLEQNGLAYQADDGDVNYAVRGFPGYGKLSGKTLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 SKRDPLDFVLWKSAKADEPADTKWESPYGMGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG- 299
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI + +   +    
Sbjct: 234 KFPHHENEIAQTEGA-FGGTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTVALGEPAAD 292

Query: 300 ----RSWP--APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGII- 347
               R  P  A ++R  ++  HYR   ++T   L +A+  L +  Q      +  +GI  
Sbjct: 293 DANYRVNPREAEMVRFFIVRNHYRSSQNYTPDNLVDAQNALDRLYQALQNVPADDQGIDW 352

Query: 348 -DP---AVLSALYNDLNTVSAIQALHKLARES--TKNHDLLPIFNASAHILGI------- 394
            +P   A  +A+ +D N+  A+ AL +LA E+  +K+        A A +LG+       
Sbjct: 353 NEPQAQAFKAAMDDDFNSSGAVAALFELASEANRSKSARAAGQLRALAAVLGLLQQDPAA 412

Query: 395 ---------EVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                        E   +    + AI+ L+  R      + F+ AD IR +L   G  L+
Sbjct: 413 YFQSPTRYSAAAIEQGQRATLDAAAIQTLIDARAAAKAARDFAEADRIRAELRDAGIELD 472

Query: 444 DYKNPDNGQRMTRWKQ 459
           D         +T+W++
Sbjct: 473 DKPGG-----LTQWRR 483


>gi|256372010|ref|YP_003109834.1| Cysteine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008594|gb|ACU54161.1| Cysteine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 372

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 155/397 (39%), Positives = 220/397 (55%), Gaps = 30/397 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           ++IY+T  +++ + +      I++Y CG T YD AH+G+A   + FDVL R L R+    
Sbjct: 1   MRIYDTQAQRVVDLELRPGEEIKIYTCGITPYDAAHLGHAAVYVTFDVLARHLERHRQRA 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           +CV   RN+TD+DD I+ +AR+      +      + +    QF +D T L    P  +P
Sbjct: 61  RCV---RNVTDVDDDILRKARE------LGTNYLDLAAMEIAQFDQDMTALGVRRPAVEP 111

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
           RAT+ I +++ L+Q+++  GHAYE +  + F  +S P +GS S    D      R     
Sbjct: 112 RATSAIAEILSLVQDLVDSGHAYEVDGWVYFSVASEPTFGSISHLDRDTMIALARERGGD 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P+   K +P DF+LW+ S   EP WES +G GRPGWHIECSA++   LG V DIHGGG D
Sbjct: 172 PDDPRKHDPLDFVLWQPSLADEPAWESRFGPGRPGWHIECSALAMRELGPVVDIHGGGSD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHE E AQS  A   E     W+H G + L+G KMSKS GN + + ELL       
Sbjct: 232 LIFPHHECEAAQS-RAITGEPFVRHWVHVGMVRLDGVKMSKSLGNLVFVRELL------- 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL 359
           +  PA V+RLA+L  HYR   D+T   L EA      W    T  G +D  V +AL NDL
Sbjct: 284 KEVPAAVVRLALLSQHYRTSWDWTGGLLEEARERYGLWRAAGTGDGAVDE-VDAALDNDL 342

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           +T  A++A+ + AR            + +A +LG+E+
Sbjct: 343 DTPGALEAIDRAARAGRG-------VSEAARMLGVEL 372


>gi|294777611|ref|ZP_06743062.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640202|ref|ZP_07994928.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|294448679|gb|EFG17228.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317388189|gb|EFV69042.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 493

 Score =  269 bits (688), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 177/494 (35%), Positives = 264/494 (53%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILLRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           I ++E    T K   +++    IR  +L  HYR  +DF+          ++RLTEA   L
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351

Query: 335 SK---WPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDL 381
            +     QT+  +G+ D      +A+ +DLN+   I  L   AR        ++T + + 
Sbjct: 352 ERITPATQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAED 411

Query: 382 LPIFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           L    +  H+   E+   KE    N          ++ L+++R+     K ++++D IR 
Sbjct: 412 LEELKSVFHLFMYEILGLKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471

Query: 434 QLESKGFILEDYKN 447
           +L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKD 485


>gi|291007003|ref|ZP_06564976.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 453

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 165/456 (36%), Positives = 236/456 (51%), Gaps = 57/456 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCG TV    HIG+ R  + +DVL R L   +    V  VRN+TDIDDKI+ +A    
Sbjct: 14  IYVCGATVQGVPHIGHVRGGLNYDVLRRWL--VHNGYDVRLVRNVTDIDDKILTKAADA- 70

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
              P  +      + + + F     RL CL P+  PRAT HI QMI L+Q +I  GHAY 
Sbjct: 71  -GRPWWE----WATAHERAFESAFDRLGCLPPSALPRATGHITQMIELMQRLIDKGHAYA 125

Query: 148 ANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A  ++ F  +S   +YG  S +++DE + G        K++P DF LWK + P EP W +
Sbjct: 126 AGGDVYFSVASYAEHYGRLSGQRLDEVQQGESTASG--KRDPRDFTLWKAAKPGEPSWPT 183

Query: 207 PWGR-GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           PWG  GRPGWH+ECSAMS++YLG  FDIHGGGLDL+FPHHENE+AQS  A   +  A  W
Sbjct: 184 PWGAAGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVFPHHENELAQSTAAG--DGFARYW 241

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +HN ++ + G KMSKS GN + I  +L+          AP IR  ++  HYR  I+++  
Sbjct: 242 MHNAWVTMSGEKMSKSLGNTVAIPAILQRAA-------APEIRYYLVAPHYRSTIEYSEP 294

Query: 326 RLTEA-------EILLSKWPQTS--TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
            L EA       +  +++  Q +     G +     +A+ +DL+T  AI  +H   RES 
Sbjct: 295 ALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAAAMDDDLSTPQAIAVVHNAIRESN 354

Query: 377 KNHD----------------------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
              D                      L P+    A   G +    H    +S  +  ++Q
Sbjct: 355 AALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADTRGADDAAHHA---LSELVGSMLQ 411

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +R      + F++AD +R +L++ G  +ED   PD 
Sbjct: 412 QRQQARAERDFATADAVRDRLQACGIAVED--TPDG 445


>gi|218884115|ref|YP_002428497.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765731|gb|ACL11130.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 481

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 185/492 (37%), Positives = 248/492 (50%), Gaps = 74/492 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--R 58
           M   IKIY+TL R + E Q I+P  ++MYVCGPTVYD+ HIG+ +  +++D   R L  R
Sbjct: 4   MLPAIKIYDTLSRDLKELQPIEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLSLR 63

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            Y+    V +V NITDIDDKII+R++ E          S I  + T+ ++    +L  + 
Sbjct: 64  GYH----VVHVMNITDIDDKIIKRSQDE------GRDWSEIVDEYTRDYLSALEKL-NVT 112

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
             H PR + HI ++I  IQ +I  G+AY A++  + F+     +YG  S R + ++  G 
Sbjct: 113 IDHHPRVSEHINEIIGFIQGLIDKGYAYIASSGSVYFNVDKYDDYGHLSGR-VSKETWGQ 171

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
                  K+NP DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG  FDIHGGG
Sbjct: 172 EQEFLSEKRNPYDFALWKAAKPGEPYWESPWGRGRPGWHIECSVMSSRYLGSRFDIHGGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENE AQS      +   +IW+H+G + +   KMSKS  N I + E     K+
Sbjct: 232 TDLIFPHHENERAQSEAFFGSKPWVSIWMHSGLVMVGKDKMSKSLKNIIPLKEAF--NKW 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGII 347
           G    P P +RL  L THYR+P+ F+           +RLT A  LL +    ST     
Sbjct: 290 G----PMP-LRLWYLSTHYRKPLYFSEEALENSVKLYERLTTAAQLLRRLAHESTGLHYA 344

Query: 348 DPAVL--------------SALYNDLNTVSAIQAL----------------HKLARESTK 377
               L              +AL +D NT  A+  +                H L   S K
Sbjct: 345 REEDLKVFNQLVSLHTRFHNALSDDFNTAEALAVVNEYLTILFRDIQYNPRHLLVSTSIK 404

Query: 378 NHDLLPIFNASAHIL-----GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
              LL  FN    +L     G+E  +  L+  + I    L+  R  L K   +  +D IR
Sbjct: 405 ---LLREFNTVLGVLDRELEGVEESEALLDSMVEI----LINVRKELRKRGIYDLSDTIR 457

Query: 433 KQLESKGFILED 444
             L   G  L D
Sbjct: 458 SDLSKIGIQLMD 469


>gi|326802927|ref|YP_004320745.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651090|gb|AEA01273.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 471

 Score =  269 bits (687), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 164/496 (33%), Positives = 252/496 (50%), Gaps = 69/496 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL +   EF  I+   + MYVCGPTVY++ HIGNAR ++ FDV+ R L Y   E 
Sbjct: 2   LTVYNTLTKAKEEFHPINAGKVNMYVCGPTVYNYIHIGNARSIVAFDVIRRYLEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII+R+++E  +         +  K    + +D  +L     T  PR
Sbjct: 61  -VNFVSNFTDVDDKIIKRSQEEGITS------RQVADKYIAAYYEDIDKLNVKRATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-- 180
              +I  +I  +Q+++   +AY  + ++ +   S  +YG  S + ID+ + G   RV   
Sbjct: 114 VLENIDAIIEFVQDLVDKDYAYVVDGDVYYRARSFSSYGKLSDQSIDDLRSGASERVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K++  DF LWK +   EP W+SPWG GRPGWHIECS MS+ YL    DIHGGG DL
Sbjct: 174 EQGKKEDSVDFALWKAAKAGEPSWDSPWGAGRPGWHIECSVMSTRYLADTLDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           +FPHHENE AQS    R  KT  N W+HNGF+ +  +G KMSKS GNF+  ++LL     
Sbjct: 234 VFPHHENERAQSEA--RTGKTFVNYWLHNGFVTMGDDGEKMSKSLGNFVLAHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIID 348
             +     ++R  +   HYR P+ F+   L EA+  L +         +      + + D
Sbjct: 287 --KEVDPTIVRFFLASAHYRAPLKFSHSNLEEAQRNLERLQTAHDNINYRLQDAKESLAD 344

Query: 349 -------------------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
                                    P  L+ +Y  L  ++      ++++   K +D   
Sbjct: 345 DEKQLGELQALDEHFIQVMDDDFNVPNALTVIYEALKRINIYMEAPQVSQAVLKAYD--Q 402

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             +    I+GIE  +  +   +   ++ L++ER      K +  +D IR++L  +G IL+
Sbjct: 403 QLSQWLAIIGIEFQEASI---LDSEVQALIEERDQARLDKNYDRSDAIRQELLDQGIILD 459

Query: 444 DYKNPDNGQRMTRWKQ 459
           D   P    + TRW++
Sbjct: 460 D--TP----QGTRWRR 469


>gi|61216286|sp|Q7V6K0|SYC_PROMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 499

 Score =  268 bits (686), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 182/506 (35%), Positives = 253/506 (50%), Gaps = 86/506 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 3   LRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI++RA ++  S+        I+ +N + F +D   L  L P   
Sbjct: 61  --TVTFVQNFTDIDDKILKRAAEKECSM------QEISEQNIEAFHQDMDSLGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
           PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+     RV 
Sbjct: 113 PRATQCLDGIRSLIGELEASGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 172

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DAEEARKQHSFDFALWKGAKSGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE     
Sbjct: 233 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLENG--- 288

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA------------------EILLSKWPQ 339
                +P+ +RL +L  HYR+P+DFT   +  A                  E L   WP+
Sbjct: 289 ----VSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYSETL--NWPE 342

Query: 340 TS-TSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLAR----------- 373
                +G+I  A               + AL +DLN+  AI  L  LAR           
Sbjct: 343 CKPLPQGVIQAAHPSNQEQCNKIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLKR 402

Query: 374 ------ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLI 418
                 + T   +LLP   +    A++LG+E  K      E  N+     I++ +  R  
Sbjct: 403 GDTKAIQETAKLNLLPRWQLLVELANVLGLEAEKAAQPAPERNNRVDENHIQRAIATRKE 462

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
               + F+ AD IR +L ++G  L D
Sbjct: 463 AKAARDFAKADLIRDELRAQGIELID 488


>gi|284043153|ref|YP_003393493.1| cysteinyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283947374|gb|ADB50118.1| cysteinyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 456

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 145/386 (37%), Positives = 206/386 (53%), Gaps = 27/386 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + I I++T   ++   +  +P  + +Y CGPTVY   H+GNARP +VF +  R L +   
Sbjct: 2   RTIAIHDTRSGRLLPLEPREPGKVGIYACGPTVYGRIHVGNARPFVVFSLYKRFLEHEGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V N+TD++DKI + AR              + ++ T  +V DT  L    P H+
Sbjct: 62  D--VTFVANVTDVNDKIYDAARAAGVES------EQLAAEMTAAYVADTDALGLGRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P A   I +++ LI  +I  GHAY    ++ FD  S P YG  S R +D+   G  +   
Sbjct: 114 PLARETIDEIVALIAVLIERGHAYAVEGDVYFDVRSYPAYGELSHRDVDQMDQGEGISGA 173

Query: 183 YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             K++P DF LWK     E   W++PWGRGRPGWHIECSAM+   LG  FD+HGGG DL+
Sbjct: 174 SLKRDPLDFALWKAWKDGEDTSWDAPWGRGRPGWHIECSAMAETLLGVGFDVHGGGSDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQ+C A R    A +W+HNG + LEG KM+KS GN   ++E L      GR 
Sbjct: 234 FPHHENEAAQTCAA-RGAPLARLWMHNGMVRLEGEKMAKSVGNIFLLHEALAAH---GRD 289

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDP--------AV 351
                +       HYR+PI ++ +RL EA   + +  +       G   P        A 
Sbjct: 290 ----ALVAYFCGGHYRQPIAYSDERLAEAARSVERIREAGRRLVTGSASPDDLSGLREAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK 377
            +AL +D NT  A+ A+    RE+ +
Sbjct: 346 FAALADDFNTPRAMAAVFDWVREANR 371


>gi|33863429|ref|NP_894989.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33640878|emb|CAE21334.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 511

 Score =  268 bits (686), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 182/506 (35%), Positives = 253/506 (50%), Gaps = 86/506 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 15  LRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGY-- 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI++RA ++  S+        I+ +N + F +D   L  L P   
Sbjct: 73  --TVTFVQNFTDIDDKILKRAAEKECSM------QEISEQNIEAFHQDMDSLGILRPDRM 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
           PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+     RV 
Sbjct: 125 PRATQCLDGIRSLIGELEASGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 184

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 185 DAEEARKQHSFDFALWKGAKSGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 244

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE     
Sbjct: 245 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLENGV-- 301

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA------------------EILLSKWPQ 339
                +P+ +RL +L  HYR+P+DFT   +  A                  E L   WP+
Sbjct: 302 -----SPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYSETL--NWPE 354

Query: 340 TS-TSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLAR----------- 373
                +G+I  A               + AL +DLN+  AI  L  LAR           
Sbjct: 355 CKPLPQGVIQAAHPSNQEQCNKIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLKR 414

Query: 374 ------ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLI 418
                 + T   +LLP   +    A++LG+E  K      E  N+     I++ +  R  
Sbjct: 415 GDTKAIQETAKLNLLPRWQLLVELANVLGLEAEKAAQPAPERNNRVDENHIQRAIATRKE 474

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
               + F+ AD IR +L ++G  L D
Sbjct: 475 AKAARDFAKADLIRDELRAQGIELID 500


>gi|159040150|ref|YP_001539403.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918985|gb|ABW00413.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 471

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 172/478 (35%), Positives = 251/478 (52%), Gaps = 60/478 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L  +  E 
Sbjct: 3   LRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAHGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A +    +P       I   N  +       L  L+PT++PR
Sbjct: 62  -VRFIRNLTDIDDKILVKAVEG--DLPYWS----IAYANELKLTAAYRALNVLSPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT HIP+M  LI  +I  GHAY A   + ++ FD  S P YG+ S +   + +     P+
Sbjct: 115 ATGHIPEMQQLIAKLIDTGHAYPAADGSGDVYFDVLSWPAYGTLSNQSPTDMQPAGDAPD 174

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF LWK   P EP    W SPWGRGRPGWHIECSAM   YLG  FDIHGGGL
Sbjct: 175 RC-KRDPRDFALWKGVKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGAEFDIHGGGL 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A      A  W+H+G LN+ G KM KS GN +   +L      G
Sbjct: 234 DLTFPHHENELAQSQAAGL--PFARYWVHHGLLNIGGAKMGKSCGNSL---DLAYVDSLG 288

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWPQTSTSK------GIID 348
            R    PV +R      HYR  ID++   L EA +    +  + Q +T +      G + 
Sbjct: 289 VR----PVELRYYYAAAHYRSVIDYSEDALREAAVAYRRIEGFVQRATEQIGAGQLGAVP 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARES----TKNHDL-----LPIFNASAHILGIEV--- 396
            A  +A+ +DLNT +A+  LH+  R+     T   D+     L    A   ILG++    
Sbjct: 345 TAFAAAMDDDLNTSAALAVLHEAVRDGNTALTGGDDVTVRTALGQVRAMLDILGVDPLDP 404

Query: 397 ----------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      +  ++  +++A+E+  Q R      + +S+AD +R QL+  G ++ED
Sbjct: 405 AWTDGSGADDLRAVVDSLVALALEQRAQAR----SRRDWSAADAVRDQLKHAGVVVED 458


>gi|296138339|ref|YP_003645582.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296026473|gb|ADG77243.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 465

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 161/478 (33%), Positives = 244/478 (51%), Gaps = 67/478 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++L R++ +F  +      +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 3   LRLYDSLTREVRDFVPLVEGKAGIYLCGATVQGVPHIGHIRSGVAFDVLRRWLLATGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +     P  +      + + ++F +    L  L P+ +PR
Sbjct: 62  -VAFVRNVTDIDDKILRKAAE--AGRPWWE----WAATHEREFTRAYDALGVLPPSAEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I QM+  ++ +I  GHAY +  ++ F   S+P+YG+ SR+K+D+ + G  +     
Sbjct: 115 ATGFITQMVTYMERMIERGHAYASAGDVYFSVRSLPDYGALSRQKVDDVQQGETLAAG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W SPWG GRPGWH+ECSAM++ YLG  FDIH GG+DL+FPH
Sbjct: 173 KRDPLDFTLWKAAKPGEPSWPSPWGDGRPGWHLECSAMATSYLGGQFDIHCGGMDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  AN W+HNG++ + G KMSKS GN ++I  LL   +       A
Sbjct: 233 HENEIAQAHGAG--DPFANYWLHNGWVTMSGEKMSKSLGNVVSIPNLLTQVR-------A 283

Query: 305 PVIRLAMLMTHYREPIDFT-----------------VQRLTE--AEILLSKWPQTSTSKG 345
             +R  +   HYR   +++                 VQR  E   E+ + +W     S G
Sbjct: 284 VELRYYLGSAHYRSMQEYSAGALAEAATAYGRIESFVQRTVERTGEVPVGQW-----SAG 338

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEV 396
                  +AL +DL   SA+  +H   R            +   L     A   ILG++ 
Sbjct: 339 FA-----AALDDDLGVPSALAEVHAAVRAGNAALEAGDLDEARRLAGAVRAMTSILGVDP 393

Query: 397 CKEHL---NKNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILED 444
              H    N     A++ L       ++ R      K ++ AD  R +L + G  + D
Sbjct: 394 LDPHWVTENAGDGAAMDALGVLVQAELERRAAARAEKNWAEADAARDRLHAAGIDVTD 451


>gi|269796450|ref|YP_003315905.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098635|gb|ACZ23071.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 477

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 155/479 (32%), Positives = 243/479 (50%), Gaps = 59/479 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T  R + +F  +    + +YVCG TV    HIG+ R  + FDVL R L    G 
Sbjct: 2   SLRLYDTATRDVRDFVPLVEGEVGVYVCGATVQGLPHIGHMRSAVAFDVLARWL-ARTGH 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VT VRN+TDIDDKI+ +      S    +      + + + F      L  L PT++P
Sbjct: 61  R-VTLVRNVTDIDDKILAK------SAAAGEPWWAWAATHERAFTHAYDALGNLPPTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT H+  M+ L++ ++  GHAY+A   ++ FD  S   YGS + +++++    T   + 
Sbjct: 114 RATGHVTDMVALMERLVAAGHAYQAGEGDVYFDVRSWEPYGSLTNQRLEDLTPATEEVDA 173

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             KK+P DF LWK + P EP    W +P+GRGRPGWH+ECSAM+  YLG  FDIHGGGLD
Sbjct: 174 GVKKDPRDFALWKAAKPGEPETASWPTPFGRGRPGWHLECSAMAQRYLGDTFDIHGGGLD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE AQS  A      A +W+H+ ++   G KMSKS GN + + E+L+  +   
Sbjct: 234 LRFPHHENEQAQSRAAGY--DFARLWMHSAWVTQGGAKMSKSLGNGLLVTEVLDRTR--- 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKG 345
               A V+R A+   HYR  +++T + + EA+    ++              P       
Sbjct: 289 ----AAVLRFALAGVHYRSMLEWTAETVAEADTTWDRFVGFVDRATERVGTVPAEEVVAA 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEV 396
            +    ++A+ +DLN  +A+ A+H+  +                 L +  +   +LG++ 
Sbjct: 345 ALPAGFVAAMDDDLNVSAALAAVHEHLKAGNTALAGGDDAAARTELVLVRSMLDVLGLDP 404

Query: 397 CK-----------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                          L+  ++  +E   Q R      K F+++D IR +L   G ++ED
Sbjct: 405 AAWSTSSTSTSSTTALDALVTCELEARAQAR----AAKDFATSDAIRDRLARAGIVVED 459


>gi|284029008|ref|YP_003378939.1| cysteinyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283808301|gb|ADB30140.1| cysteinyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 480

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 252/485 (51%), Gaps = 69/485 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGE 63
           +++Y+T    + +F  + P  + +Y CG TV    H+G+    +VFDVL R L R  Y  
Sbjct: 3   LRLYDTATAAVRDFVPVHPGKVGIYHCGLTVQGAPHVGHIYKEVVFDVLRRWLERSGY-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT----TRLACLAP 119
             VT + N+TDI+DKI+ ++ +            I    +  +F ++       L C  P
Sbjct: 61  -QVTVIANVTDIEDKILAKSAERE----------IPWWAHAYEFERELHWAYDVLGCRPP 109

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           T++PRAT HIP+M+ +IQ +I  GHAY   + + ++ FD  S P YG  S +KID+ +  
Sbjct: 110 TYEPRATGHIPEMLEMIQQLIDGGHAYVAQDGSGDVYFDVKSWPAYGELSNQKIDDMEAA 169

Query: 177 TRVPEKYHKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                +  K++P DF LWK  T   P+   W +PWGRGRPGWH+ECSAM+  YLG  FDI
Sbjct: 170 EDADPR-GKRDPRDFALWKGHTEGVPLTASWPTPWGRGRPGWHLECSAMAGKYLGGEFDI 228

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHENE+AQS      +K A  W+HN  +   G KMSKS GN   +  ++E
Sbjct: 229 HGGGLDLRFPHHENELAQSTAVG--QKFARFWMHNALVTAAGEKMSKSLGNGAIVRNVVE 286

Query: 294 TKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKG 345
             +        P+ +R  ++ +HYR  ++F+   L EA       E  +++  + + +  
Sbjct: 287 RVR--------PIELRFYLVQSHYRSVVEFSFGALDEAATSFQRIEGFVTRATELTGAAD 338

Query: 346 IIDPAV-------LSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASA 389
            +DPA        ++A+ +DL T +A+  LH   R+  K           + L    +  
Sbjct: 339 RVDPAAVELPADFVAAMDDDLGTPAAMAVLHTTVRDGNKLLADGDSPALRETLATVRSML 398

Query: 390 HILGIEVCKE----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            + G++   E           L + +   ++ L+ +R    + K ++++D IR +L++ G
Sbjct: 399 DVFGLDPLAEPWVSRTGTTDELTEVVDGLVQALLDQRQAARERKDYAASDQIRDRLKALG 458

Query: 440 FILED 444
            ++ED
Sbjct: 459 VVVED 463


>gi|116669295|ref|YP_830228.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166200129|sp|A0JSV8|SYC_ARTS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116609404|gb|ABK02128.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 487

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 172/495 (34%), Positives = 241/495 (48%), Gaps = 65/495 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T   ++ +F  + P  + +Y CG TV    H+G+ R  I FD L R L Y  G +
Sbjct: 1   MRFYDTASAEVRDFVPLIPGKVSLYYCGATVQGLPHVGHIRSAIAFDQLTRWLEYR-GFR 59

Query: 65  CVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            VT VRN+TDIDDKI+ ++        +E P     +    +  +  Q F+K    L   
Sbjct: 60  -VTVVRNVTDIDDKILAKSALSFEPDFEEGPDDVREEEWWALAYRYEQAFLKAYDTLGVS 118

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQK 174
            PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YGS +R+KID+ +
Sbjct: 119 RPTYEPRATGHIPEMHALIQGLIDRGHAYPALDDSGDVYFDVRSWNRYGSLTRQKIDDMQ 178

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G    +   KK+P DF LWK     EP    W SPWG GRPGWH+ECSAM + YLG  F
Sbjct: 179 -GAPDADPRGKKDPRDFALWKGHKEGEPTTASWVSPWGTGRPGWHLECSAMVTKYLGTEF 237

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  +G KMSKS GN ++  E+
Sbjct: 238 DIHGGGLDLRFPHHENEMAQSQAAG--HAFANFWMHNGMVTYQGEKMSKSIGNTVSPAEM 295

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----QTSTSKGI 346
           LE            V+R  +    YR  +D+    L EA   + +          T  G 
Sbjct: 296 LELAS-------PRVVRYYLGQAQYRSVLDYQPTSLQEAAAAVERIDGFIARAVRTLSGS 348

Query: 347 IDPAVLSALYND---------------LNTVSAIQALHKLARESTKNHDLLPIFNASA-- 389
           +       L++                LN   A+ ALH   R    N  L    N++A  
Sbjct: 349 VVSGAAELLFSSHGTVPDAFAAAMDDDLNVPQALAALHDTVR--AGNTALTAGDNSAART 406

Query: 390 ---------HILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                     +LG+         E  +  + + +E  +  R      K ++++D IR  L
Sbjct: 407 ALHSVTDMLRVLGLNDVAAPARDEQADTALGVLVEAQLGARAQARATKDWAASDAIRDTL 466

Query: 436 ESKGFILEDYKNPDN 450
            + G ++ED   PD 
Sbjct: 467 AAAGVVVED--GPDG 479


>gi|116073130|ref|ZP_01470392.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068435|gb|EAU74187.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 496

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 159/406 (39%), Positives = 215/406 (52%), Gaps = 55/406 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           ++  N+L  +   F+ ++     +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 3   LRFTNSLTSRTEAFEPLEAGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGYD- 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYV+N TDIDDKI+ RA +E  S+        ++ +N + F  D  RL  L     
Sbjct: 62  ---VTYVQNYTDIDDKILNRANEEGSSM------EAVSERNIEAFEIDMGRLNILPADRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
           PRAT  I  +  LI  +   G AY ++ ++ FD S   +YG  S R  +EQ+ G    T 
Sbjct: 113 PRATGCIDGIQKLISELEAKGAAYSSDGDVYFDISKAKDYGKLSGRDPNEQQQGASGRTA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK     EP W+SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DGEESRKRHPFDFALWKGVKEGEPSWDSPWGPGRPGWHIECSAMVRQELGTTIDIHLGGG 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A+     AN+W+HNG +N+ G KMSKS GNF TI  LL+     
Sbjct: 233 DLTFPHHENEIAQSETANGT-TLANLWMHNGMVNVGGTKMSKSLGNFTTIRALLD----- 286

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLT---------EAEILLSK-------WPQTS 341
             S  +P+ +RL +L  HYR+P+DFT + L           A + L +       WP  +
Sbjct: 287 --SGVSPMTMRLFVLQAHYRKPLDFTAEALEAATTGWKGLNAALGLGRVHAQSLGWPVAA 344

Query: 342 TSK--------------GIIDPAVLSALYNDLNTVSAIQALHKLAR 373
                             ++    ++A+ +DLN+  A+  L  LAR
Sbjct: 345 VQDQGAQLAGDAVDGDLAVMKERFVAAMDDDLNSSGALAVLFDLAR 390


>gi|330996564|ref|ZP_08320446.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329573120|gb|EGG54739.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 494

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 174/495 (35%), Positives = 259/495 (52%), Gaps = 57/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ IYNTL RK  EF+ I P  + MYVCGPTVY  AH+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFIYNTLSRKKEEFKPITPGRVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLQHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +    T +F   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEELE-PME-----VAQYYTNRFHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
              L  L P+ +P AT HI + I L++ I+ +G+AY +   + FD    +   +YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQIELVKEILDNGYAYVSEGSVYFDVEKYNKTHHYGKLSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +++    +R  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLEDVINNSRALDGVGEKHNQVDFALWKCAQPQHIMRWPSPWSNGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A +     N W+HN  + + G+KM KS GNF
Sbjct: 233 YLGDHFDIHGGGMDLIFPHHECEIAQA-VASQGSDMVNYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +    +        +P+ IR  +L  HYR  +DF+ + L  +E  LS+  +     
Sbjct: 292 ITLAQFFSGEHESLTQAYSPMTIRFFILQAHYRSTVDFSNEALQASEKGLSRLMEGVANL 351

Query: 340 ---TSTSKGIIDPAVLS--------ALYNDLNTVSAIQALHK--------LARESTKNHD 380
              T T+ G +  A +         A+ +DLN+   I  L          + R++T + D
Sbjct: 352 KRITPTAGGSVGMAYVDELRRKCYEAMDDDLNSPIVISHLFDACRVINTVVDRKATMSAD 411

Query: 381 LLPIFNASAHILGIEV--CKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIR 432
           +L       H    ++   KE         +     ++ L+++R+I    K ++++D IR
Sbjct: 412 VLAALAEVFHTFAFDILGLKEETGGGSGREEAFGKVVDMLLEQRMIAKANKDWATSDKIR 471

Query: 433 KQLESKGFILEDYKN 447
             L + GF ++D K+
Sbjct: 472 DNLAALGFEVKDTKD 486


>gi|154249366|ref|YP_001410191.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769335|sp|A7HKV1|SYC_FERNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154153302|gb|ABS60534.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 470

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 168/465 (36%), Positives = 239/465 (51%), Gaps = 50/465 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ I +TL +     + ++P  ++MYVCGPTVY++ HIGNARPM+VFD L R L +  G 
Sbjct: 3   KVYITDTLSKSKVPLETLEPGVVKMYVCGPTVYNYIHIGNARPMVVFDALRRFLEFV-GY 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + +  V+N TDIDDKII  A++       N     +      ++  D   L   A  + P
Sbjct: 62  RVIM-VQNFTDIDDKIINEAKE------WNVDWKTVADTFIAEYFHDAQLLGVRAANYHP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T+ +  ++  I+ +I    AY A N ++ F    + +YG  S + +D+ + G RV   
Sbjct: 115 RTTDFVKDIVEAIETMIKKDFAYPAENGDVYFSVRKLRDYGKLSGKNLDDLRAGARVDVN 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF+LWK + P EP W+SPW  GRPGWHIECS MS   LG +FDIHGGG DLIF
Sbjct: 175 ELKKDPLDFVLWKSAKPGEPTWDSPWCNGRPGWHIECSVMSQKLLGDMFDIHGGGEDLIF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS      +  A  W+HNG + + G KMSKS GN   + E +       R +
Sbjct: 235 PHHEDEIAQSEALTG-KPPAKYWMHNGMIIVRGDKMSKSLGNTFMVREAV-------RRY 286

Query: 303 PAPVIRLAMLMTHYREPIDFT----------VQRLTEA-EILLSKWPQTSTSK------G 345
               ++L +L  HYR P++F+           QR+  A      K+P     K       
Sbjct: 287 TKDGVKLFLLSKHYRSPMEFSDEILQDNMRAAQRVHNALNRFTEKYPYPLVPKIDEEMEN 346

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILG--IEVC 397
            ID  V  AL +D NT  A+  L    +E  K+ D       L +++    I G  + V 
Sbjct: 347 FIDRFV-EALSDDFNTPVALSILFDTVKELNKSMDEGNDERALKMYHLVKRIYGPVLGVF 405

Query: 398 KEHLNKNISIAIEKLVQ--ERLILL-----KMKKFSSADYIRKQL 435
              + K   +  E+L Q  + +I L     K K+F  AD +R  L
Sbjct: 406 DSEIQKQQQVNSEQLDQLIQGIINLRNEYRKNKQFEIADKLRDAL 450


>gi|296111414|ref|YP_003621796.1| cysteine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832946|gb|ADG40827.1| cysteine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 483

 Score =  268 bits (684), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 174/491 (35%), Positives = 261/491 (53%), Gaps = 63/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I P  I MYVCGPT+Y++ HIGNAR  I FDV+ R   Y   + 
Sbjct: 16  IHVYNTLTREKEIFKPITPGKINMYVCGPTIYNYIHIGNARSAIAFDVVRRYFEYRGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR++       D ++I  ++    F +DT  L     T + R
Sbjct: 75  -VNYVSNFTDVDDKIIKRAREQGV-----DEMTI-ANRYADAFHQDTLPLNIKPATVRSR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP-- 180
           AT+ IP +I  + ++I  G+AYE+  ++ F       YG  + + + E +     R+   
Sbjct: 128 ATDVIPDIILFVGDLIKKGYAYESEGDVYFRAKRFKGYGILAHQDLAEMEANAAGRLDDI 187

Query: 181 EKYHKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK S +  E  W+SPWG+GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 188 ELTRKEDPIDFAVWKASHSKDEISWQSPWGKGRPGWHIECSVMAQKYLADTIDIHGGGID 247

Query: 240 LIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           L FPHH NEIAQS    R  KT  N W+HNGF+N+   KMSKS GNF T++++L      
Sbjct: 248 LAFPHHTNEIAQSEA--RTGKTFVNYWMHNGFVNVNDEKMSKSLGNFTTVHDMLA----- 300

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDP 349
             ++  P+ IR  +  T YR  I+++   L +A + L +          +  T+    D 
Sbjct: 301 --NYDDPMAIRYLLSTTQYRRSINYSDDTLEQARVALDRIRTAYRNLSFRMETAVNGRDQ 358

Query: 350 AV-----------LSALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLPIF 385
           AV            +A+ +D NT +A+ ++ +L               E+T++  LL   
Sbjct: 359 AVDRVIEERISDFEAAMDDDFNTPNALASIFELVTIANTLAESQQIYLETTQH--LLHTI 416

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                + GIE     +  N++   ++L++ R +  + + F ++D +R+ L   G ++ED 
Sbjct: 417 AKLMSVFGIENLS--VASNLTKEQDELLKLRHLARETRDFEASDRLRQNLHQLGIVVED- 473

Query: 446 KNPDNGQRMTR 456
             P  GQR  R
Sbjct: 474 -TP-QGQRWHR 482


>gi|325299474|ref|YP_004259391.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319027|gb|ADY36918.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 492

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 178/495 (35%), Positives = 260/495 (52%), Gaps = 59/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MENKLIIYNTLSRRKEPFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----VVQYYLLRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIKLVEEILKNGYAYESQGSVYFDVAKYNKDHHYGVLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINTTRELDGQQEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  ++        W+HN  + + G+KM KS GNF
Sbjct: 233 YLGETFDIHGGGMDLIFPHHECEIAQAVASEG-HPMVRYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
           IT+ E    + K   +++    IR  +L  HYR  +DF+ + L  AE  L +        
Sbjct: 292 ITLEEFFTGSNKLLAQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGIKNL 351

Query: 338 ----PQTSTSKGIIDPAVL-----SALYNDLNTVSAIQALHKLAR------------EST 376
               P  STS   I+PA L      A+ +DLNT   I  L    R             + 
Sbjct: 352 ERITPSASTSG--IEPAGLREKCYEAMNDDLNTPIVISHLFDGIRMINTVLDKKATISAA 409

Query: 377 KNHDLLPIFNASA-HILGIEVCKEH---LNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
              +L  +F+  A  ILG++   E+     +  S  ++ L++ER+     K ++++D IR
Sbjct: 410 DLEELKSVFHLFAFDILGLKAEGENNAAREEAFSKVVDMLLEERMKAKANKDWATSDKIR 469

Query: 433 KQLESKGFILEDYKN 447
             L + GF ++D K+
Sbjct: 470 DSLAALGFEVKDTKD 484


>gi|189465034|ref|ZP_03013819.1| hypothetical protein BACINT_01378 [Bacteroides intestinalis DSM
           17393]
 gi|189437308|gb|EDV06293.1| hypothetical protein BACINT_01378 [Bacteroides intestinalis DSM
           17393]
          Length = 491

 Score =  267 bits (683), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 177/503 (35%), Positives = 259/503 (51%), Gaps = 60/503 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AY +   + FD        +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYVSEGSVYFDVEKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQAEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A +     + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGNDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           I ++E    T K   +++    IR  +L  HYR  +DF+ + L  AE  L +        
Sbjct: 292 INLDEFFNGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLGRMMDAVNGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHKLAR--------ESTKNHDLLP 383
             I P+  S             A+ +DLNT   I  L   AR          T   + L 
Sbjct: 352 EKITPSATSSVDVKAVREKCYEAMNDDLNTPIVIAHLFDGARMINNIIAGNDTITAEDLK 411

Query: 384 IFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H+   ++   KE  + N          ++ L+++R++    K ++++D IR +L
Sbjct: 412 DLKETFHLFCFDILGLKEENDSNEEREVAFGKVVDMLLEQRMMAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
            + GF ++D      G+  + WK
Sbjct: 472 TALGFEIKD------GKEGSEWK 488


>gi|237752694|ref|ZP_04583174.1| cysteinyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376183|gb|EEO26274.1| cysteinyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 467

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 172/477 (36%), Positives = 261/477 (54%), Gaps = 51/477 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY++ +++   F+ I P+ +R+YVCGPTVYD +H+G+AR  IVFD+L R+L    G K
Sbjct: 1   MKIYDSHKKEKVPFEPIIPNEVRLYVCGPTVYDDSHLGHARSAIVFDLLRRVL-IENGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TDIDDKII +A Q + S      I  IT   T++++ +   L  +    +P+
Sbjct: 60  -VIFAKNFTDIDDKIINKATQNNCS------IEEITQTYTKRYLDEMQALGVMRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  M  +IQN++    AY+  N ++    S    YG+ S R I E +  +RV    
Sbjct: 113 ATENLEAMFAMIQNLLDKKIAYQTPNGDVYLSVSKDREYGNLSGR-IAELESQSRVQNSE 171

Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLG----KVFDIHGGGL 238
            K +  DF LWK    + + G++SP+G+GRPGWHIECSAM   +L        DIHGGG 
Sbjct: 172 QKHDSKDFALWKSYKGIGDVGYDSPFGKGRPGWHIECSAMIKEHLALKGDYAIDIHGGGT 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE  Q+ CAD  +  A  WIHNGF+ + G KM+KS GN   I + L      
Sbjct: 232 DLLFPHHENEACQTRCADN-QVLAKYWIHNGFVTINGEKMAKSLGNSFFIKDALA----- 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT-------------VQRLTEAEILLSKWPQTSTSKG 345
             ++   ++R  +L THYR  ++F+             + RL +   +L K    ++   
Sbjct: 286 --NYDGEILRFYLLSTHYRAGLNFSEEDLLASKKRLDRLYRLKKRLAILPKKTIPTSLDN 343

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKL---ARE--STKNHDLLPIFNAS----AHILGIEV 396
               A L AL +DLN   A+  L      A E   +K +D +P   A+    A +LGI +
Sbjct: 344 AFKTAFLDALNDDLNISKALSVLDDFIANANEQLDSKQNDKIPQIYANLELVAKVLGIGI 403

Query: 397 --CKEH----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             C E+    +++++   IE L+++R    K+K F +AD IR++L +KG  + D  N
Sbjct: 404 KDCFEYFKLGVSEDLKTEIENLLKKRAEFKKIKDFQNADKIREELRNKGIEIMDTPN 460


>gi|226304178|ref|YP_002764136.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229494513|ref|ZP_04388276.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|226183293|dbj|BAH31397.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229318875|gb|EEN84733.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 464

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 159/474 (33%), Positives = 239/474 (50%), Gaps = 49/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L  +  + 
Sbjct: 3   LRLYDTGTRALRDFVPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWLLAHGND- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A       P  +  +      T  +     +L  L P+ +PR
Sbjct: 62  -VAFVRNVTDIDDKILNKAAG--AGRPWWEWAATFERSFTWAY----DQLGVLPPSIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ QM+ +++ +I +GHAY A  ++ FD  S P YG+ S  K+D+   G    E   
Sbjct: 115 ATGHVTQMVEMMERLIENGHAYAAGGDVYFDVQSYPEYGALSGHKLDDVHQGESAAEG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK   P EP W +PWG GRPGWH+ECSAM+  YLG  FDIH GG DL+FPH
Sbjct: 173 KRDPRDFTLWKAVKPGEPSWPTPWGPGRPGWHLECSAMAEFYLGAAFDIHCGGRDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA   +  A  W+HNG++ + G KMSKS GN +++  +L+  +        
Sbjct: 233 HENEIAQAKCAG--DDFAQYWLHNGWVTMSGEKMSKSLGNVLSVPNVLKKVR-------P 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSKWPQTSTSKGIIDPAVLSAL 355
             +R  +   HYR  ++++ + L E+          +L +         G       +AL
Sbjct: 284 QELRYYLGSAHYRSNLEYSDEALDESAKSYQGLESFVLRTHKRAGGVELGTWTEGFAAAL 343

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKEHLNK--- 403
            NDL+   A+  +H  A E         +           A   ILG++   EH  +   
Sbjct: 344 DNDLSVPIALAEIHGKASEGNSALAAGDLDAARVAAGQVRAMLAILGVDPLDEHWTQSGG 403

Query: 404 NISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +   A+E L       +  R      K ++ AD +R +L   G  + D   PD 
Sbjct: 404 DTETAMEALDVLVRADLDRRQQARTEKNWAVADEVRDRLIKAGIEVTD--TPDG 455


>gi|110639787|ref|YP_679997.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123058501|sp|Q11PK9|SYC_CYTH3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110282468|gb|ABG60654.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 497

 Score =  267 bits (683), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 144/345 (41%), Positives = 204/345 (59%), Gaps = 26/345 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+ +YNTL RK   F+ I   ++ MYVCGPTVY   H+G+AR  I FD+++R L++   
Sbjct: 4   EKLVVYNTLTRKKEVFEPIHAPHVGMYVCGPTVYGEGHLGHARSAITFDIVFRYLQHL-- 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          +DKI ++A+ E    P+      I  + T+ +     
Sbjct: 62  KYQVRYVRNITDVGHLEHDADEGEDKIAKKAKLEKVE-PME-----IVQRYTEYYHDALR 115

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----YGSFSRR 168
           +L  L P+ +P A+ HIP+ I +++ I+  G+AYE    + FD     N    YG  S R
Sbjct: 116 KLNVLPPSIEPTASGHIPEQIRMVEEILSSGYAYENTGSVYFDVEKFTNDKNKYGHLSGR 175

Query: 169 KIDEQKMGTRVPEKYH-KKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +++   GTR  +  H KK+ ADF LWK ++P     W+SPWG+G PGWH+ECSAMS+ Y
Sbjct: 176 ILEDLISGTRSLDGQHTKKSSADFALWKLASPEHIMKWDSPWGKGFPGWHLECSAMSTKY 235

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DL+FPHHE EIAQS  A++ E  A  W+HN  + + G+KM KS GNFI
Sbjct: 236 LGETFDIHGGGMDLMFPHHECEIAQSVAANKKE-PAKYWLHNNMITINGQKMGKSLGNFI 294

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           T+NEL         +++    IR   L  HYR  +DF+   L  A
Sbjct: 295 TLNELFTGNHTLLEQAYSPMTIRFFTLQAHYRSTLDFSNDALKAA 339


>gi|305663603|ref|YP_003859891.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378172|gb|ADM28011.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 476

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 173/485 (35%), Positives = 252/485 (51%), Gaps = 61/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+I  F+ I+P  ++ Y CGPTVYD+ H+G+ R  + FD + R L+    + 
Sbjct: 3   ITIYNTLSRRIEPFEPINPPLVKAYFCGPTVYDYTHLGHIRAYLAFDFIKRYLKLRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +++NITDIDDKII+RA +E  S         +T K  + +++    L      H PR
Sbjct: 62  -IIHIQNITDIDDKIIKRANEEGVSW------KELTDKYIRDYLQILNALKIEIHLH-PR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI ++I  I+ +I  G+AY A +  + FD S + +YG  S RK  E+    R  E++
Sbjct: 114 VTEHINEIIEFIKGLIDKGYAYVAPSGSVYFDISLVNDYGKLSGRKKAEE---WRQEEEF 170

Query: 184 --HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P EP WESPWGRGRPGWH EC+ MSS YLG  FD+HGGG DLI
Sbjct: 171 LSEKRNPYDFALWKASKPGEPFWESPWGRGRPGWHTECAVMSSKYLGTQFDVHGGGQDLI 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIA +     ++     WIH G+L + G KMSKS GN I   + +         
Sbjct: 231 FPHHENEIAMAEALYGVKPWVKYWIHVGYLTIRGEKMSKSLGNVIYAKDAI-------NK 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTSTSK------- 344
           +   ++RL    +HYR+ ++ + +          RL  A   L K  +    K       
Sbjct: 284 YSPEILRLWAFSSHYRKQVEVSDEVLNSYRDVYSRLVLAVETLKKIIKQENIKYSLKEDE 343

Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG---- 393
                   +I+     A+ +D NT  A +A+H+L     K  +    F  +         
Sbjct: 344 INILKKLEMIEIEFHKAMSDDFNTPKAFEAVHELTSLVFKEIERYETFELALRAYEILLN 403

Query: 394 ----IEVCKEHLNKNISI---AIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFIL 442
               I V  ++  ++I++    IEKL++     R  L K K++  +D IR++L   G  +
Sbjct: 404 FNKVIGVLDKYFEESITVDIEMIEKLIELILKVRTELRKRKEYELSDKIRQELLMLGIKV 463

Query: 443 EDYKN 447
            DYK+
Sbjct: 464 FDYKD 468


>gi|72160616|ref|YP_288273.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
 gi|109894957|sp|Q47TG4|SYC_THEFY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71914348|gb|AAZ54250.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 466

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 163/471 (34%), Positives = 243/471 (51%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T  R++ +F  +    + +Y+CG TV    HIG+ R  + FD+L R L  Y G +
Sbjct: 3   LRFYDTRTRQVRDFVPLREGCVSLYLCGATVQAPPHIGHIRSGVSFDILRRWL-MYRGYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN+TDIDDKI+  A  E            ++ +N + F +    L CL PT +PR
Sbjct: 62  -VIFCRNVTDIDDKILNVAASE------GVQWWEVSERNYRAFAEAYDTLGCLPPTVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT HIP+MI L++ +I  GHAY   + + ++ FD +S   YGS S ++++E +      +
Sbjct: 115 ATGHIPEMIELMRRLIDRGHAYVAEDGSGDVYFDVTSYAEYGSLSNQRLEEMR-AAEDGD 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIHGGG+DL+
Sbjct: 174 ARAKRDPRDFALWKGARPGEPSWPTPWGPGRPGWHLECSAMATKYLGPTFDIHGGGVDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS  A   +  A  W+HNG L   G KMSKS GN + I E+    +     
Sbjct: 234 FPHHENESAQSRAAG--DGFARYWLHNGLLTTGGEKMSKSLGNSLLIPEITRRVR----- 286

Query: 302 WPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----QTSTSKGIIDPAV----- 351
              PV +R  +   HYR  +D++ + L EA     +      + +   G I   V     
Sbjct: 287 ---PVELRYYLGQAHYRSNLDYSEESLREAASAYQRLENFLVRVNEIAGPIPDDVPVPEE 343

Query: 352 -LSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEH- 400
             +AL +DL    A+   H   RE           +   +     A   +LG++      
Sbjct: 344 FAAALDDDLGVPQALAVAHNHVREGNSALAEGAKERAAQIGARLRAMLAVLGLDPLSPQW 403

Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  L+  +   +  ++++R    K K +++AD IR QL   G  +ED
Sbjct: 404 AGSDDSGLHDVVDSLVSVVLEQRQEARKRKDYATADRIRDQLAEMGIAVED 454


>gi|257457848|ref|ZP_05623007.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444561|gb|EEV19645.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 487

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 181/489 (37%), Positives = 252/489 (51%), Gaps = 63/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  KI +F  +DP  +  Y CGPTVY++AHIGN R  +  D L RLLR+     
Sbjct: 3   LRIYNTLGHKIEDFVPVDPGKVGFYGCGPTVYNYAHIGNLRAYVFQDTLSRLLRFL--GY 60

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT+V NITDI          +DK+++ A++   S+        I    T+ F KDT RL
Sbjct: 61  PVTHVMNITDIGHLSGDADDGEDKMVKTAKERGQSVLE------IADFYTKAFFKDTERL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P    +AT+H+  MI LI+ I  +GH Y A   + +D  + P YG  +  K+++ K
Sbjct: 115 NIRRPDVVCKATDHVQDMIELIKRIEANGHTYSAGGNLYYDIMTFPKYGELASIKLEDLK 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G R+    +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+ F
Sbjct: 175 AGARIEVDENKRNPHDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGEQF 234

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D I  HH NEIAQS  A   +K    W+HN FL +   KMSKS G+FIT++++
Sbjct: 235 DIHTGGIDHIRIHHTNEIAQSEGATG-KKWVKYWLHNEFLVMNKGKMSKSTGDFITLDKV 293

Query: 292 LETKK---------FGGR-------SWPAPVI----------RLAMLMTHYREPIDFTVQ 325
           +E             GG        SW A             R+A L+   +   DF   
Sbjct: 294 IEAGYAPLDYRFLLLGGHYRTQLTFSWEAMETAKNARKNLEQRIANLLAEAKTLPDFPSG 353

Query: 326 RLT--EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR----ESTKNH 379
            +T  +AE LL     T  ++  +   V  AL  D++T  A+  L +  +    E+ +  
Sbjct: 354 NVTAEQAEQLL----HTEKARCYLADFV-QALEEDISTPRALSVLQQAVKDKELEAAEAI 408

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISI----AIEKLVQERLILLKMKKFSSADYIRKQL 435
            L+ IF+A   +  IE  +       S+     IE+LV ER    K K F  AD IR  L
Sbjct: 409 TLIRIFDAVLALRLIEEAEALHTGGESVDNAEEIERLVAERTEAKKNKDFKRADEIRNIL 468

Query: 436 ESKGFILED 444
           +++G  LED
Sbjct: 469 KNRGIALED 477


>gi|332881450|ref|ZP_08449099.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680448|gb|EGJ53396.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 494

 Score =  267 bits (682), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 172/495 (34%), Positives = 258/495 (52%), Gaps = 57/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ IYNTL RK  EF+ + P  + MYVCGPTVY  AH+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFIYNTLSRKKEEFKPVTPGRVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLQHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +    T +F   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEELE-PME-----VAQYYTNRFHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
              L  L P+ +P AT HI + I L++ I+ +G+AY +   + FD    +   +YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQIELVKEILDNGYAYVSEGSVYFDVEKYNKAHHYGKLSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +++    +R  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLEDVINNSRALDGVGEKHNQVDFALWKCAQPQHIMRWPSPWSNGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A +     N W+HN  + + G+KM KS GNF
Sbjct: 233 YLGDHFDIHGGGMDLIFPHHECEIAQA-VASQGSDMVNYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +    +        +P+ IR  +L  HYR  +DF+ + L  +E  L++  +     
Sbjct: 292 ITLAQFFSGEHESLTQAYSPMTIRFFILQAHYRSTVDFSNEALQASEKGLARLMEGIANL 351

Query: 340 ---TSTSKGIIDPAVLS--------ALYNDLNTVSAIQALHKLAR--------ESTKNHD 380
              T T+ G ++ A +         A+ +DLN+   I  L    R        ++T   D
Sbjct: 352 KRITPTAGGSVEMAYVDELRRKCYEAMNDDLNSPIVISHLFDACRVINTVVDQKATMAGD 411

Query: 381 LLPIFNASAHILGIEV--CKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIR 432
           +L       H    ++   KE         +     ++ L+++R+I    K ++++D IR
Sbjct: 412 VLAALTEVFHTFAFDILGLKEETGGGSGREEAFGKVVDMLLEQRMIAKANKDWATSDKIR 471

Query: 433 KQLESKGFILEDYKN 447
             L + GF ++D K+
Sbjct: 472 DNLAALGFEVKDTKD 486


>gi|297566117|ref|YP_003685089.1| cysteinyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850566|gb|ADH63581.1| cysteinyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 481

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 175/487 (35%), Positives = 238/487 (48%), Gaps = 62/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F    P  + MYVCGPTVY   H+G+AR  +VFDVL R L +   + 
Sbjct: 3   LQLYNTLTRQKEPFVPATPGYVGMYVCGPTVYGDPHLGHARGPVVFDVLRRWLLHQGLQ- 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD+          +DKI +RA+ E    P+      +  K T  +      L
Sbjct: 62  -VRYVRNITDVGHLTDDADEGEDKIQKRAKLERLE-PME-----VAEKYTWAYFDAMDDL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P+  PRA  HIP+ I L Q +I  GHAYE N  + F  SS P YG  S R  +EQ+
Sbjct: 115 NVLRPSISPRAAGHIPEQIELTQALIEKGHAYEKNGSVYFRVSSWPEYGKLSGRNFEEQE 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G RV  +  K++P DF LWK + P     W SPWG+G PGWHIECSAMS  YLG+ FDI
Sbjct: 175 AGARVAVREEKEDPRDFALWKAADPEHIMRWNSPWGQGFPGWHIECSAMSLKYLGEGFDI 234

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL FPHHE EIAQ+  A      A  W+H+  + L G KM+KS GN + + +LL 
Sbjct: 235 HGGGIDLQFPHHECEIAQAEAAG--HAFARYWVHHNHVLLNGEKMAKSTGNLVILRDLLN 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSKGIIDP 349
             +         V+R  +L +HYR  +DFT   L  A      LL  + +         P
Sbjct: 293 QNE-------PMVVRFYLLQSHYRSVLDFTSAGLEAARNGYLRLLGAYREVRRQLHAAKP 345

Query: 350 AVLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              +AL   L+T+ A   QAL+                 A    L  +  K+ L +   +
Sbjct: 346 GKHAALEKALDTLEADFSQALNDDLNTPQAIAAFFVFLPALNKALADKAGKDSLERAEKV 405

Query: 408 AIE------KLVQERLILLKM----------------------KKFSSADYIRKQLESKG 439
             E       L   R++  ++                      K F+ +D+IR +L   G
Sbjct: 406 FAELGEGVLGLFPARVLEARLGGALLDGLIQLLLDLRERARQEKNFALSDWIRHRLSELG 465

Query: 440 FILEDYK 446
            ++ED K
Sbjct: 466 VVVEDTK 472


>gi|42523767|ref|NP_969147.1| hypothetical protein Bd2317 [Bdellovibrio bacteriovorus HD100]
 gi|61216207|sp|Q6MKR7|SYC_BDEBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39575974|emb|CAE80140.1| cysS [Bdellovibrio bacteriovorus HD100]
          Length = 482

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 245/489 (50%), Gaps = 68/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+  +++ +F  + P  ++MYVCGPTVY+F H+GN R  +VF+++   L +  G K
Sbjct: 2   LKIHNSQSKQLEDFTPLTPGQVKMYVCGPTVYNFLHVGNFRGPVVFNMVRNWLEHL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY  N TD+DDKII RA +      +  + + ++ K   ++ KD   L        P+
Sbjct: 61  -VTYALNFTDVDDKIINRANE------LGMSPTELSEKYIAEYKKDFASLGLRPHDMNPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +  ++++++    AYEA  ++++   S  +YG  S R  D+   G RV     
Sbjct: 114 VTEHMDDIRSMVESLVSQKKAYEAQGDVLYSIESFKDYGKLSGRNTDDLLAGARVEVDEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P E  W SPWG GRPGWHIECSAM  +  G   DIHGGG+DLIFPH
Sbjct: 174 KRNPMDFALWKAAKPGEVSWPSPWGPGRPGWHIECSAMIKNLFGDQIDIHGGGMDLIFPH 233

Query: 245 HENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HENEIAQS  C      K    W+HN  LN  G+KMSKS GN +T+ E LE        +
Sbjct: 234 HENEIAQSEGCTGKAFVK---YWMHNNMLNFGGQKMSKSLGNIVTMREFLEM-------Y 283

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVL--------- 352
            A + +  +L  HYR   DF  + +  A   LS+ +   S ++  + P V          
Sbjct: 284 NAEIYKWMILSAHYRTLSDFGDEAVERAVGGLSRVYSALSMAESYLTPEVTQEDAAFAKI 343

Query: 353 ---------SALYNDLNTVSAIQALHKLAREST-------------------------KN 378
                     A+ +D  T  A  A+ ++ R+                           K 
Sbjct: 344 TQDAWKKVEEAMNHDFGTPDAFAAMFEVVRQFNAQVRRGMKANPAIQGKALAFHNFVRKM 403

Query: 379 HDLLPIFNASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
             ++ +F   AH   I++  + L K +++   A++ LV ER      K F+ +D +R ++
Sbjct: 404 GSMMSLFQEPAHAFLIKL-DDMLLKKMNLERSAVDALVAERGEARAAKDFAKSDELRAKI 462

Query: 436 ESKGFILED 444
            + G  + D
Sbjct: 463 TALGISVSD 471


>gi|255534556|ref|YP_003094927.1| cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340752|gb|ACU06865.1| Cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 488

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 177/488 (36%), Positives = 253/488 (51%), Gaps = 54/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L      F  I  +N+ MYVCGPTVY   H+GN R  + FD +YR L +  G K
Sbjct: 3   LKIYNSLSGDKEIFTPIHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRALTHL-GYK 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD           +D+ ++++R E    P+      I  K T  F K     
Sbjct: 62  -VRYVRNITDAGHLTDDGDVDNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKVLDVF 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKI 170
             L PT +P AT HI + I L Q ++  G AYE+N  + FD     S   NYG  SRR I
Sbjct: 115 NLLPPTIEPTATGHIVEQIELTQKLVDKGFAYESNGSVYFDVQEYNSRGLNYGELSRRNI 174

Query: 171 DEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           +E    TR +  +  KKNP DF LWK ++P     W SPWG G PGWH+EC+AMS+ YLG
Sbjct: 175 EELFANTRDLDGQNEKKNPQDFALWKAASPAHIMRWNSPWGEGFPGWHLECTAMSTKYLG 234

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIHGGG+DL FPHHE E+AQ    +  E   N W+H   L + G++MSKS GN+I  
Sbjct: 235 EKFDIHGGGMDLKFPHHECEVAQGKACNGTEP-VNYWLHANMLTMNGQRMSKSTGNYILP 293

Query: 289 NELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
            EL+  +  F  +++   V+R   L  HYR  +D +           QRL +A  +LS  
Sbjct: 294 MELVSGSNSFFEKAFHPAVVRFNFLQAHYRSVLDISNEAMLASEKGFQRLMDAMKILSDV 353

Query: 338 PQTSTSKGIID-----PAVLSALYNDLNT-------VSAIQALHKL--ARE---STKNHD 380
              + S    D          AL +D N+         A+  + +L   +E   ST   +
Sbjct: 354 QLKTASNSTFDVEAWKKKCYDALTDDFNSPILISHLFEAVNFIFRLKDGKETVTSTDLEN 413

Query: 381 LLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           L  + N     +LG++  +E+ ++ +  A++ L++ R    K K F  +D IR +L ++G
Sbjct: 414 LKQLLNDFVFDVLGLQNVEENNHQKLDQALQVLIELRNQARKAKNFDLSDQIRDRLLAEG 473

Query: 440 FILEDYKN 447
             L+D ++
Sbjct: 474 IELKDGRD 481


>gi|319900445|ref|YP_004160173.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415476|gb|ADV42587.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 491

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 257/503 (51%), Gaps = 60/503 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +       YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEIMKNGYAYESEGSVYFDVAKYNKDHQYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMLTINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ EL   T     +++    IR   L  HYR  +DF+ + L  AE  LS+        
Sbjct: 292 ITLEELFNGTHPLLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLSRLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLLP 383
             I PA  S             A+ +DLN+   I  L          LA   +   D L 
Sbjct: 352 EKIVPATTSTIDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITADDLK 411

Query: 384 IFNASAH-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 H     ILG++      E         ++ L++ER+     K ++++D IR +L
Sbjct: 412 ELEDMFHTFCFDILGLKEDNTSNEEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
            + GF ++D      G+    WK
Sbjct: 472 TALGFEIKD------GKEGCEWK 488


>gi|284989249|ref|YP_003407803.1| cysteinyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284062494|gb|ADB73432.1| cysteinyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 467

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 165/472 (34%), Positives = 240/472 (50%), Gaps = 50/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + EF  +      +YVCG TV    H+G+ R  + FDVL R L     E 
Sbjct: 3   LRLYDTAARAVREFTPLRAGQASVYVCGLTVQGPPHVGHVRAALSFDVLRRWLTASGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ +A +    +P           N     +    L  L PT++PR
Sbjct: 62  -VTYVRNVTDIDDKILVKAAER--GVPW----WAWAYTNELACTRAYDVLGVLPPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P M+ L++ +I  GHAY  + ++ FD  S P YG+ + +K++  +          
Sbjct: 115 ATGHVPDMVELMERLIDRGHAYAVDGDVYFDVRSFPEYGALTGQKLENLEPAADTGTDER 174

Query: 185 KKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           K++P DF LWK     EP    W +PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL 
Sbjct: 175 KRDPRDFALWKAHKDGEPQTAAWATPWGRGRPGWHLECSAMAERYLGPEFDIHGGGLDLR 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS  A   +  A  W+HNG++ L G KMSKS GN   ++E+++  +     
Sbjct: 235 FPHHENEQAQSRAAG--DGFAQYWLHNGWVTLGGEKMSKSLGNTALVDEVVQRVR----- 287

Query: 302 WPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQ---TSTSKGIIDPA 350
              PV +R  ++  HYR  I+FT   L EA       E  + +  +         ++   
Sbjct: 288 ---PVELRYYLVAPHYRSTIEFTDAALEEAGAAYRRIESFVKRAAERVGADAGSPVLCAD 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEH- 400
             +AL +DL T +A+ A+H+  RE                L    A   +LG++    H 
Sbjct: 345 FTAALDDDLGTPAAVAAVHEAVREGNTALAEGNEKAVAGALGSVRAMLGVLGLDPLDPHW 404

Query: 401 --------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                   L +     +   +++R      K +++AD IR QL + G  +ED
Sbjct: 405 AAAGGGDRLGEVADGLVALALEQRQAARARKDYAAADAIRDQLAALGVQVED 456


>gi|325281506|ref|YP_004254048.1| cysteinyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313315|gb|ADY33868.1| cysteinyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 492

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 174/491 (35%), Positives = 266/491 (54%), Gaps = 54/491 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK ++ +YNTL RK  +F+ I+P  + +YVCGPTVY  AH+G+ARP I FD+L+R L+Y 
Sbjct: 1   MKNRLVLYNTLSRKKEQFEPINPPFVGLYVCGPTVYGDAHLGHARPAITFDLLFRYLKYL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++A+ +    P+      I    T ++  +
Sbjct: 61  -GYK-VRYVRNITDVGHLTDDSDDGEDKIEKKAKLDRLE-PME-----IVQFYTNRYHHN 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
             +L  L P+ +P A+ HI +   L++ I+ +G AYE++  I FD  +     +YG  S 
Sbjct: 113 MEQLNTLPPSIEPHASGHIIEQEELVKKILDNGFAYESDGSIYFDVEAYNKKYSYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R+++E    TR +  +  K+NPADF LWK++TP     W SPW  G PGWH+ECS MS  
Sbjct: 173 RRVEELFANTRQLDGQGEKRNPADFALWKKATPEHIMRWPSPWSNGFPGWHLECSCMSQK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGGLDL FPHHE EIAQS  A   E     W+HN  + ++G+KM KS GNF
Sbjct: 233 YLGDRFDIHGGGLDLQFPHHECEIAQSTAAYGHE-AVKYWMHNNMVTIKGQKMGKSLGNF 291

Query: 286 ITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+++L   +        +P+ +R  +L  HYR P+DF+           +RL  A   L
Sbjct: 292 ITLDQLFSGENDVLEQAYSPMTVRFFILQAHYRSPLDFSNEALKAAQKGYERLMTAVRAL 351

Query: 335 SKWPQTSTSKGIIDPAVL---SALYNDLNTVSAIQALHKLAR---------ESTKNHDLL 382
            K   ++ +   +D  +     A+ +DLNT   I  L    R         E     +L 
Sbjct: 352 DKVKASAGNTVDVDALITQCEEAIDDDLNTPVLISHLFDGVRMINSLVAGNEKIDAGNLA 411

Query: 383 PI----FNASAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQL 435
            +     +    ILG++   E ++++  +    ++ ++  R    + K ++++D IR +L
Sbjct: 412 KLKKLYQDYVFDILGLKAESESVSQDHEVLGKILDMVMSIRTEAKQKKDWATSDKIRDEL 471

Query: 436 ESKGFILEDYK 446
           ++ G  ++D K
Sbjct: 472 KAAGVAIKDTK 482


>gi|225155153|ref|ZP_03723648.1| Cysteine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224804100|gb|EEG22328.1| Cysteine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 472

 Score =  266 bits (681), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 179/483 (37%), Positives = 258/483 (53%), Gaps = 62/483 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSN----IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           I+++++L R+  E   + PS+     R Y CGPTVY  AHIGN R  +V D++ RLL   
Sbjct: 3   IRLHDSLSREARE---LAPSHADGFFRFYNCGPTVYAPAHIGNFRTFVVNDLIRRLLEIE 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G   V +VRN+TD+DDK I R+R+E    P+ D    +T + T++F  D T L CL P 
Sbjct: 60  FGPDRVRHVRNLTDVDDKTIRRSREE--KRPLAD----VTLQWTEKFHADCTALGCLPPH 113

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P AT HI + I +I  +   GHAY A +  + F  +S P YG+ SR K  E K G+ +
Sbjct: 114 VEPAATTHIAEQIDMIAILERKGHAYRAADGSVYFKVNSFPGYGALSRVKERELKPGSAL 173

Query: 180 P----------EKYHKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYL 227
                      +   K++ +DF LWK   P +    W SPWG+GRPGWHIECSAMS  +L
Sbjct: 174 ASGNAAPAAAHDSDEKEDGSDFALWKARKPEDGDVFWPSPWGQGRPGWHIECSAMSKKHL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   D+H GG+DL+FPHHENEIAQS CC   +   A  W H+  L ++G+KMSKS  N  
Sbjct: 234 GDTIDLHTGGVDLLFPHHENEIAQSQCCNGTL--FARHWYHSEHLLVDGKKMSKSLNNLY 291

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS--KWPQTSTSK 344
           T+++L E         PA  +R A+L  H R+ ++FT+  L  AE  L+  +  + S  K
Sbjct: 292 TLDQLREMGHT-----PA-ALRYALLAGHPRKQLNFTLDSLHAAEKALATLRHFRDSLVK 345

Query: 345 GIIDP---------AVLSALYNDLNTVSAIQAL--------HKLARESTKNHDLLPIFN- 386
             + P         AVL+AL  DLNT +A+ AL        H+ A     +H  L  F+ 
Sbjct: 346 RGLKPDHAPSTRFDAVLNALREDLNTPAALGALFGEINSYDHRPA-----HHGDLAAFDR 400

Query: 387 --ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               A  L +          I      L ++R    + K +++AD +R Q+ + G+ + D
Sbjct: 401 VIQQALGLDLTPLPPPPPAEIPAETAALAEQRWTAKQQKNYAAADALRAQIAATGWTMID 460

Query: 445 YKN 447
            K+
Sbjct: 461 RKD 463


>gi|120406286|ref|YP_956115.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|187629833|sp|A1TG09|SYC_MYCVP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119959104|gb|ABM16109.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 463

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 157/473 (33%), Positives = 234/473 (49%), Gaps = 52/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL   + +F  + P ++ +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 1   MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+      H +           +   + F      L  L P+ +PR
Sbjct: 60  -VAFIRNVTDIDDKIL------HKAADAGRPWWEWAATYERAFTAAYDALGVLPPSAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ LI+ +I  GHAY  + ++ F  +++P+YG  S  +ID+   G  V     
Sbjct: 113 ATGHITQMVELIERLIERGHAYTGDGDVYFSVATLPDYGKLSGHRIDDVHQGEGVATG-- 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+FPH
Sbjct: 171 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCESYLGAAFDIHAGGMDLVFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN + I  +L+  +       A
Sbjct: 231 HENEIAQAEAAG--DGFARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVR-------A 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPA-----VL 352
             +R  +   HYR  ++F+   L +A       E  L +     T  G + P        
Sbjct: 282 AELRYYLGSAHYRSMLEFSETALQDAAKAYAGIEDFLHR---VRTRVGAVVPGEWTPKFG 338

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH---------ILGIEVCKEHLNK 403
           +AL +DL   +A+  +H    E  +  D      A  H         ILG +   E    
Sbjct: 339 AALDDDLAVPAALAEVHAARAEGNRALDAGDHDTALTHAMSIRAMMGILGADPLDERWES 398

Query: 404 N---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                     + + ++  VQ R      + ++ AD IR +L+  G  + D  +
Sbjct: 399 RDETSAALAAVDVLVQAEVQRREDARARRDWAEADAIRDRLKEAGIEVTDTAD 451


>gi|296274353|ref|YP_003656984.1| cysteinyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296098527|gb|ADG94477.1| cysteinyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 467

 Score =  266 bits (680), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 251/475 (52%), Gaps = 48/475 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           KI IY++++++   F+ I  +  ++YVCGPTVYD +H+G+AR  I FD+L+R+L+     
Sbjct: 3   KIFIYDSVKKEKVLFEPIVENQAKIYVCGPTVYDDSHLGHARSAIAFDMLHRVLK--ANG 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT  +N TDIDDKII++  +   S+        IT++    +  D   L  L  T +P
Sbjct: 61  LNVTMTKNFTDIDDKIIKKMNESSRSLE------DITTQYINAYKADMHSLNILDNTLEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT ++  MI +I ++I    AY  ++ + FD S   +YG+ S+R  DE  +  RV    
Sbjct: 115 KATQNLEAMIEMINDLISKDIAYIIDDGVYFDVSKDNSYGNISKRASDENSIA-RVEVNT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-----KVFDIHGGGL 238
            K+N +DF LWK     +  +E+ +G+GRPGWHIECSAM   +L         DIHGGG 
Sbjct: 174 QKRNSSDFALWKFEKANDVSYEASFGKGRPGWHIECSAMIQKHLAYKDKDYQIDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ C+   E  A  W+HNGF+ ++G KMSKS GN   + ++L      
Sbjct: 234 DLLFPHHENEAAQTRCSSHKE-LAKYWMHNGFVTIDGEKMSKSLGNSFFLKDIL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDP 349
            +S+   V+R  +L  HYR   +F  + L  ++  L K+            S +      
Sbjct: 287 -KSYSGEVVRFYLLTAHYRTDFNFNEEDLISSKKRLDKYYRVKKRVYGSAASAANSEFKA 345

Query: 350 AVLSALYNDLNTVSAI-----------QALHKLARESTKNHDLLPIFNASAHILGI---- 394
            VL+AL +D+N+  AI             L K  ++     +L+  F     ILGI    
Sbjct: 346 KVLNALNDDINSSKAISIIDDMINNANDKLDKNPKDKNLKKELIANFEFINEILGICFND 405

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  +  +N++    IE+L+ +R    K K F++AD +R +L + G  + D  N
Sbjct: 406 AYEYFQFGINEDTKNKIEELINKRTEAKKQKDFATADSVRDELIALGISVMDTPN 460


>gi|270294934|ref|ZP_06201135.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317477932|ref|ZP_07937115.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|270274181|gb|EFA20042.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316905846|gb|EFV27617.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 491

 Score =  266 bits (680), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 257/503 (51%), Gaps = 60/503 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        +YG  S 
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSVYFDVEKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + E   + W+HN  L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGEDMVHYWMHNNMLTVNGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ EL + T     +++    IR   L  HYR  +DF+ + L  AE  L++        
Sbjct: 292 ITLEELFKGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLLP 383
             I PA  S             A+ +DLN+   I  L          LA   +   + L 
Sbjct: 352 DKITPAATSTIDVKSLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITAEDLK 411

Query: 384 IFNASAH-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H     ILG++      E         ++ L++ER      K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLQEDNASNEEREAAFGKVVDMLLEERSKAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
            + GF ++D      G+  + WK
Sbjct: 472 TALGFEIKD------GKDGSEWK 488


>gi|157736506|ref|YP_001489189.1| cysteinyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|187629788|sp|A8ERE6|SYC_ARCB4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157698360|gb|ABV66520.1| cysteinyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 467

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 164/474 (34%), Positives = 250/474 (52%), Gaps = 48/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+++++++  EF+ I    +++YVCGPTVYD +H+G+AR  I FD+L+R+L+    E 
Sbjct: 4   LHIFDSVKKEKVEFKPIQEGKVKIYVCGPTVYDDSHLGHARSAIAFDLLHRVLKVNDYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT  +N TDIDDKII++  +       N  +  IT++    +  D   L  L  T +P+
Sbjct: 63  -VTMTKNFTDIDDKIIKKMYE------TNKTLENITNQYINAYKADMKALNILDNTIEPK 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  M  +I N+I    AY+ ++ + FDTS    YG+ S +  DE     RV E   
Sbjct: 116 ATENLEVMKEMISNLISKDVAYKTSDSVYFDTSKDNLYGTLSHKSNDENSQA-RVEENQE 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-----KVFDIHGGGLD 239
           K+N ADF LWK     +  +++P+G+GRPGWHIECSAM   +L         DIH GG D
Sbjct: 175 KRNSADFALWKFEKANDVSFDAPFGKGRPGWHIECSAMIEKHLAYKDSPYQIDIHAGGAD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+ C+   +  A  W+HNGF+N+ G KMSKS GN   + ++L       
Sbjct: 235 LLFPHHENEAAQTRCSSG-QNLAKYWMHNGFVNINGEKMSKSLGNSFFLKDVL------- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV------- 351
           +S+   VIR  ++ THYR  + F  + L  ++  L K +       GI D +V       
Sbjct: 287 KSYSGEVIRFYLMSTHYRADLSFNEEDLIASKKRLDKIYRLKKRVYGIEDSSVNKKFKED 346

Query: 352 -LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKE 399
            L+AL +D+NT  A+  + ++   +    D           L+   N    +LGI     
Sbjct: 347 ILNALNDDINTSIALSVIDEMINSANDKLDSNPKDKNLKKELISNINFIEEVLGIGGNDA 406

Query: 400 H------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +      +N++    IE L+ +R    K K F +AD +R +L S    L D  N
Sbjct: 407 YAYFQFGINESTKEKIESLILKRNEAKKTKDFQTADKLRDELSSMDISLMDTVN 460


>gi|194476516|ref|YP_002048695.1| cysteinyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191523|gb|ACB42485.1| cysteinyl-tRNA synthetase [Paulinella chromatophora]
          Length = 510

 Score =  266 bits (679), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 190/528 (35%), Positives = 259/528 (49%), Gaps = 94/528 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K  NTL R++  F  I    I +Y CG TVYD  H+G+AR  I +DVL R L +   E 
Sbjct: 3   LKFTNTLTRQLESFTPIKDRKISIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKI+ RA +E  S+       +++ +N + F  D   L  L     PR
Sbjct: 62  -VTFVQNFTDIDDKILVRAAREESSM------QLVSDRNIEAFKSDMALLNILPADRMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  +  +  +I ++   G AY    ++ F       YG  S + + + + G        
Sbjct: 115 ATKCLDGIRSIISDLEKKGVAYSTEGDVYFSIKEYAQYGKLSGKDLSKLQEGASGRISAS 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  KKN  DF LWK++   EP + SPWG GRPGWHIECS M    LG+  DIH GG DL
Sbjct: 175 EEVRKKNSFDFALWKKAKIDEPSFTSPWGLGRPGWHIECSTMVREELGETIDIHLGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +  AN W+HNG +N+ G+KMSKS GNF TI ELL        
Sbjct: 235 IFPHHENEIAQSEMANG-KNLANYWLHNGMVNVNGQKMSKSLGNFTTIRELLA------- 286

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI--------------------------- 332
           S  +P+ +RL +L THYR+P+DF  + L  A I                           
Sbjct: 287 SGISPLALRLFVLQTHYRKPLDFNSEALKAASIGWANLNIALSLGERFKKNLQWDLGEFT 346

Query: 333 -----LLSKWPQTSTSK------GIIDPAVL------SALYNDLNTVSAIQALHKLA--- 372
                L++K  ++S  K       I+DP  L      +A+  DLNT +AI  L KLA   
Sbjct: 347 KLYVLLMNKEDESSQKKLKPKLIEIMDPLKLAYQNFITAMDEDLNTSAAIAILFKLAKPL 406

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQERL-------------I 418
           R  +   +   I N+++  +  E  +      I +A I  L  ERL             +
Sbjct: 407 RSLSNRLERGEIINSNSKTVLFEELQCQWQLLIGLASILGLRAERLGEKHTSLSSNDITV 466

Query: 419 LLKM-------KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +K+       K F +AD IR  L+ KG  L D   P N   +T W Q
Sbjct: 467 QIKLRNESKAKKDFLTADRIRDFLKDKGIELID--KPGN---ITEWIQ 509


>gi|313682063|ref|YP_004059801.1| cysteinyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154923|gb|ADR33601.1| cysteinyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 465

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 166/472 (35%), Positives = 248/472 (52%), Gaps = 50/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+++++   +F+ +    + +YVCGPTVYD AH+G+A+  +VFD+L R+L     E 
Sbjct: 1   MTIYDSVKKTKLKFEPLREGKVSLYVCGPTVYDDAHLGHAKSALVFDLLRRVLEAEDYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITDIDDKII +A++      +    S I  + T  + +D   +   APT +P+
Sbjct: 60  -VLFARNITDIDDKIINKAQE------LGITTSEIAERYTDAYHRDMAAIGVRAPTLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  M  +IQ ++  GHAY  +N +I FDTSS  NY S S R+  E    +RV +  
Sbjct: 113 ATESIDAMCDMIQKLLDKGHAYSISNGDIYFDTSSDKNYLSLSNRQSSENV--SRVEKVG 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGGL 238
            K+N ADF LWK        ++SP+GRGRPGWH+ECSAM   Y+         DIHGGG 
Sbjct: 171 EKRNEADFALWKAVHDEGVAFDSPFGRGRPGWHLECSAMIERYVTSNEGEYAIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ CA   E  A  W+HNGF+ + G KMSKS GN   + + L      
Sbjct: 231 DLLFPHHENEAAQTRCATNHE-LAKYWMHNGFVTIAGEKMSKSLGNSFFLKDAL------ 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------TSKGI---IDP 349
            +++   V+R  +L THYR   +F    L  ++  L +  +        ++ GI      
Sbjct: 284 -KAYDGEVLRFYLLSTHYRGDFNFNEDDLIASKRRLDRLYRLKKRIFGLSTDGIETEFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L AL +DLN   A   + +L  ++ +  D           LL        +LG     
Sbjct: 343 NLLEALGDDLNVSRAYALIDELIAQANEALDTNPKDKAYRQILLSSLATVETVLGFGGQD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E  +  L++     I +L+ +R    K K F+++D +R +L + G  + D
Sbjct: 403 PYEYFQFGLDEETKTKINELIAKRSEAKKAKDFAASDALRDELTALGVSIMD 454


>gi|160888583|ref|ZP_02069586.1| hypothetical protein BACUNI_01000 [Bacteroides uniformis ATCC 8492]
 gi|156861897|gb|EDO55328.1| hypothetical protein BACUNI_01000 [Bacteroides uniformis ATCC 8492]
          Length = 491

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 257/503 (51%), Gaps = 60/503 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        +YG  S 
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSVYFDVEKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A + E   + W+HN  L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGEDMVHYWMHNNMLTVNGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ EL + T     +++    IR   L  HYR  +DF+ + L  AE  L++        
Sbjct: 292 ITLEELFKGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLLP 383
             I PA  S             A+ +DLN+   I  L          LA   +   + L 
Sbjct: 352 DKITPAATSTIDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITAEDLK 411

Query: 384 IFNASAH-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H     ILG++      E         ++ L++ER      K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLQEDNASNEEREAAFGKVVDMLLEERSKAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
            + GF ++D      G+  + WK
Sbjct: 472 TALGFEIKD------GKDGSEWK 488


>gi|315635665|ref|ZP_07890928.1| cysteine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479962|gb|EFU70632.1| cysteine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 467

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 164/472 (34%), Positives = 249/472 (52%), Gaps = 48/472 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I+++++++  EF+ I    +++YVCGPTVYD +H+G+AR  I FD+L+R+L+    E  V
Sbjct: 6   IFDSVKKEKVEFKPIQEGKVKIYVCGPTVYDDSHLGHARSAIAFDLLHRVLKANDYE--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T  +N TDIDDKII++  +       N  +  IT++    +  D   L  L  T +P+AT
Sbjct: 64  TMTKNFTDIDDKIIKKMYE------TNKRLEDITNQYINAYKADMKALNILDNTIEPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            ++  M  +I N+I    AY+ ++ + FDTS    YG+ S +  DE     RV E   K+
Sbjct: 118 ENLEVMKEMISNLISKDVAYKTSDSVYFDTSKDNLYGTLSHKSNDENSQA-RVEENQEKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-----KVFDIHGGGLDLI 241
           N ADF LWK     +  +++P+G+GRPGWHIECSAM   +L         DIH GG DL+
Sbjct: 177 NSADFALWKFEKANDVSFDAPFGKGRPGWHIECSAMIEKHLAYKDSPYQIDIHAGGADLL 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQ+ C+   +  A  W+HNGF+N+ G KMSKS GN   + ++L       +S
Sbjct: 237 FPHHENEAAQTRCSSG-QNLAKYWMHNGFVNINGEKMSKSLGNSFFLKDVL-------KS 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV--------L 352
           +   VIR  ++ THYR  + F  + L  ++  L K +       G+ D +V        L
Sbjct: 289 YSGEVIRFYLMSTHYRADLSFNEEDLIASKKRLDKIYRLKKRVYGVEDSSVNKKFKEDIL 348

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH- 400
           +AL +D+NT  A+  + ++   +    D           L+   N    +LGI     + 
Sbjct: 349 NALNDDINTSIALSVIDEMINSANDKLDSNPKDKNLKKELISNINFVEKVLGIGGNDAYA 408

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                +N++    IE L+ +R    K K F +AD IR +L S    L D  N
Sbjct: 409 YFQFGINESTKEKIEDLILKRNEAKKAKDFQTADEIRDELSSMDISLMDTVN 460


>gi|313900429|ref|ZP_07833922.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954491|gb|EFR36166.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
          Length = 445

 Score =  266 bits (679), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 168/469 (35%), Positives = 251/469 (53%), Gaps = 56/469 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KI+N++ +K+ EF+ +  + + MYVCGPTVY++ HIGNARP++VFD L R  +   Y  
Sbjct: 1   MKIFNSMNQKVEEFKPLHENEVHMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAIGYNV 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V+   N TD+DDKII+ A++      +++A   IT K    +  D   L    P   P
Sbjct: 61  KMVS---NYTDVDDKIIKVAKE----CGVSEA--EITEKFIDAYNHDRLSLHAAMPDAAP 111

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T  +  +I  I+ ++  GHAYE   ++ F  +S+ +YG  S ++I++  +G R+ E  
Sbjct: 112 RVTETMDAIIAFIKLLVDKGHAYEMEGDVYFRVNSVESYGKLSNQQIEDLLVGARIDENS 171

Query: 184 HKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGK--VFDIHGGGLD 239
            K+NP DF LWK++   E G  W+SPW  GRPGWH EC  M +   G     DIHGGG+D
Sbjct: 172 KKENPLDFTLWKKT---EEGIKWDSPWSVGRPGWHTECVVMINQEFGGEHTIDIHGGGMD 228

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A      AN WIHNG +N++G KMSKS GN I   +++   K GG
Sbjct: 229 LKFPHHENEIAQSRAA-YDSPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMI--AKIGG 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------- 348
                 V+R  ML  HYR P++   + +  A+  L++      Q     G+ D       
Sbjct: 286 N-----VLRWVMLSAHYRAPLNINEEAIETAKKELNRVATAMKQAYVKLGLADVDMDETC 340

Query: 349 -----PAVLSALYNDLNTVSA-------IQALHKLARESTKN----HDLLPIFNASAHIL 392
                   L A+ +D+NT +A       ++AL++  R+   +      L+        +L
Sbjct: 341 DEEQLAPFLDAMQDDMNTPNAFAAVFETVKALNQALRQREIDLQAVKALVRTLEKMMDVL 400

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           GIE+    L   +S   ++L ++    +K K F +AD  R +L  KG +
Sbjct: 401 GIEL----LRLTMSEEDKQLHRQWKAAVKEKDFETADQYRAKLIEKGIL 445


>gi|317123115|ref|YP_004103118.1| cysteinyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315593095|gb|ADU52391.1| cysteinyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 518

 Score =  265 bits (678), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 138/327 (42%), Positives = 192/327 (58%), Gaps = 16/327 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL  +   F+ ++P  +RMY CGPTVYD+ H+GN R  + FDV+   L Y  G +
Sbjct: 3   IQIYNTLTGQKEPFEPLEPGRVRMYNCGPTVYDYFHVGNLRTFLFFDVVRGWLEYR-GYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I RA +    I + +    +  +  + + +D   L  +     PR
Sbjct: 62  -VRYVQNFTDIDDKLIRRAAER--GITVKE----LADEQIRAYFEDADALGIVRADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  I  +I LI+ +I  G+AY A  ++ FD     +YG  S +K ++   G RV    +
Sbjct: 115 VSEKIGAIIALIRRLIDQGYAYVAGGDVFFDVERFRHYGKLSGQKTEQLLAGARVEAAEN 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK   P EP W+SPWG GRPGWHIECSAM+   LG+  DIH GG DL+FPH
Sbjct: 175 KRNPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMAMDELGQTIDIHSGGSDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+H   + + G++M KS GNF  + +L        R  P 
Sbjct: 235 HENEIAQSEAATG-KPFARYWMHVALVQVGGQRMGKSMGNFWRVRDLR------ARYHPE 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE 331
             IRL +L  HYR P++F+++ L +AE
Sbjct: 288 -AIRLFILSAHYRNPLEFSLEALDQAE 313


>gi|86609278|ref|YP_478040.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|109894953|sp|Q2JKL2|SYC_SYNJB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86557820|gb|ABD02777.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 525

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 187/546 (34%), Positives = 256/546 (46%), Gaps = 121/546 (22%)

Query: 7   IYNTLERKITEFQAIDPSN----------------------IRMYVCGPTVYDFAHIGNA 44
           +YNTL R+   FQ +                          +RMYVCG TVYD  H+G+A
Sbjct: 3   VYNTLTRRKEVFQPLAAGGSQSVSVGNSQGSAAPVAEEKPLVRMYVCGVTVYDLCHLGHA 62

Query: 45  RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
           R  +V+D++ R L +  G + V YV+N TD+DDKI++RA +        +++  +  +  
Sbjct: 63  RTYVVWDMVRRYLEWR-GYR-VKYVQNFTDVDDKILKRALER------GESMQAVAERFI 114

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-------------- 150
            ++ +D   L        PRAT  +  M  LIQ++ L G AY   +              
Sbjct: 115 AEYFRDMDCLNIKRADFYPRATQSLQAMFQLIQSLELKGFAYRVRDPIRHQTDQSSLLQA 174

Query: 151 ------------EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK-YHKKNPADFILWK 195
                        + +     P+YG  S RK++E + G   RV E+   K++P DF LWK
Sbjct: 175 GHQPETPASVQYSVYYSVRKFPDYGQLSGRKLEEMEAGASGRVGEEGAEKQDPFDFALWK 234

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
            + P EPG+ SPWG GRPGWHIECSAM    LG   DIH GG DLIFPHHENE+AQS   
Sbjct: 235 AAPPSEPGFASPWGWGRPGWHIECSAMVRETLGDHIDIHAGGADLIFPHHENELAQSEPI 294

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
              +  A  W+HNGFLN+ G KMSKS GNF T+ + L         +    +RL +L TH
Sbjct: 295 TG-KPMAKYWMHNGFLNINGEKMSKSLGNFTTLRQALAV-------YHPMALRLFLLQTH 346

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------------IDPAVLSALYND 358
           YR PID     LTEA +  +     +  KGI                    A  +A+ ND
Sbjct: 347 YRSPID-----LTEAAMQAASRGWETLQKGIHCAQHFCKEEKGSPDAEAMQAFQAAMDND 401

Query: 359 LNTVSAIQALHKLARESTKNHDLL-----------PIFNASAHILGI------------- 394
             T  A+    +LA+E T+ H+L             +   SA +L I             
Sbjct: 402 FGTPEALAIAFELAKELTREHNLFTHQGQTHLEPQALKQKSAALLEILATLGFCWPSFSE 461

Query: 395 -EVCKEHL-NKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            E  KE   N  ++   IE+L+ +R    K K FS AD IR QL++ G  L D K+    
Sbjct: 462 FEGSKEAATNGELNFKKIEELIAQRSAARKAKNFSEADRIRDQLKALGITLIDQKDG--- 518

Query: 452 QRMTRW 457
              TRW
Sbjct: 519 --TTRW 522


>gi|48477156|ref|YP_022862.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48429804|gb|AAT42669.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 455

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 161/466 (34%), Positives = 246/466 (52%), Gaps = 41/466 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+TL   + EF+ +  + I ++VCGPTVYD  H+G+AR  I FD + + +R      
Sbjct: 1   MRFYDTLSGSVKEFKPMHKNRINIFVCGPTVYDDFHLGHARTYIFFDTIVKFMRSI--GY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII+RA  E  S P       I ++   ++++  + L   +  +  R
Sbjct: 59  SVFYLQNITDIDDKIIKRAHDEDRS-P-----EEIANRYFNEYLRIMSELGIDSVNYYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  I+ +I  G+AYE ++ + F      +YG  S++ +D      R      
Sbjct: 113 ATLYIDEIISQIKRMIEKGYAYETSDGVYFCVRKFRDYGELSKQNLDNIIENARGILNED 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK+  P EP WESPWG+GRPGWHIE +A++  Y G  +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKMKPGEPYWESPWGKGRPGWHIEDTAITETYFGDEYDIHGGGSDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ          A+ WIH G +N+   KMSKS  N+ITI ++L       + +  
Sbjct: 233 HEAEIAQMRSISNKRYLAHYWIHTGMINVNREKMSKSLKNYITIKDVL-------KEYKP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSAL 355
             +R A+L  ++   I+F++  L E+   LS+   T          +   ++D   +   
Sbjct: 286 NELRFAVLNANFNTSIEFSMDSLNESREALSRIINTYRKLKKIDSESGDYMVDSDYIIKR 345

Query: 356 YNDL-----NTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL 401
           Y D+     +T S I+ L     +  KN D         ++ IF+     + I   +  L
Sbjct: 346 YMDIMSDNFDTRSLIRELMDFVTDINKNMDHINKDTAGNIIRIFDYINSFMNIIPEERSL 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           N NI   I+ ++  R  L   K++  +DYIR +LE  G  +ED  N
Sbjct: 406 NNNI---IDSVLNIRSKLRSEKRYDLSDYIRMELEKSGIHIEDKNN 448


>gi|332298095|ref|YP_004440017.1| cysteinyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332181198|gb|AEE16886.1| cysteinyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 497

 Score =  265 bits (678), Expect = 9e-69,   Method: Compositional matrix adjust.
 Identities = 174/503 (34%), Positives = 251/503 (49%), Gaps = 81/503 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R++ +F  I       Y CGPTVY+FAHIGN R  +  D+L R L Y   + 
Sbjct: 3   LRLYNTLGRQLQDFIPIHAGKAGFYGCGPTVYNFAHIGNLRAYVFLDILDRTLTYLGYD- 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            +T+V NITDI          +DK+++ A+    S+        I    T  F  D  RL
Sbjct: 62  -ITHVMNITDIGHLSGDADEGEDKMVKTAKDRGQSVLE------IAQFYTDAFFGDIDRL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P    +AT H+P MI LI+ I  +GH Y A   + FD S+ P+YG  +   +D+ K
Sbjct: 115 NIRRPDVVCKATEHVPDMIELIKRIEANGHTYTAGGNLYFDVSTFPSYGDLAGLNLDDLK 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G R+    +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+ F
Sbjct: 175 AGARIDIDRNKRNPFDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGEQF 234

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE---------GRKMSKSN 282
           DIH GG+D I  HH NEIAQS  A   +K  N W+HN FL +            KMSKS+
Sbjct: 235 DIHTGGIDHIPIHHTNEIAQSEGATG-KKWVNYWLHNEFLVIAKDKESADGGAGKMSKSS 293

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT--------------VQRLT 328
           GNF+T+  L++      + + A   R  +L  HYR  + F+              VQR+ 
Sbjct: 294 GNFLTLQSLVD------KGYDALDYRFFLLGAHYRSQVAFSWAAMDGAKNARKALVQRV- 346

Query: 329 EAEILLSKWPQTSTSKGI------------IDPAVLSALYNDLNTVSAIQALHKLAREST 376
            A++L     +  T  G+            +D    +AL NDL T  A+ AL    +++ 
Sbjct: 347 -AKVLARSAERVQTGAGLPTKKPSARAHAYLDK-FTAALENDLATPQALSALQTAVKDAE 404

Query: 377 -KNHDLLPIFNASAHILGIEVCK---EHLNKNISIA-----------IEKLVQERLILLK 421
               +++ +      +L +++ K   + L    + A           I+ L++ER    K
Sbjct: 405 LAPEEVVSLVQRMDSVLALDLLKNARQLLADETAAAVTDGSDPEAKEIQALIEERTAAKK 464

Query: 422 MKKFSSADYIRKQLESKGFILED 444
            K ++ AD IR +L  +G ILED
Sbjct: 465 AKNYARADEIRTELNGRGIILED 487


>gi|260906618|ref|ZP_05914940.1| cysteinyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 483

 Score =  265 bits (678), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 169/487 (34%), Positives = 245/487 (50%), Gaps = 65/487 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNT  R   E + ++  ++ +YVCG TV    HIG+ R   VFD L R L Y     
Sbjct: 3   IALYNTASRTTDELRPVNAGHVGIYVCGATVQGEPHIGHLRSASVFDQLRRWLMYR--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT VRN+TDIDDKI+ ++ +E      +        K  + F +    L  L P+++PR
Sbjct: 61  SVTLVRNVTDIDDKILSKSAEEGRPWFAH------AFKYERAFTQAYAALDVLPPSYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT HI +MI LI  +I  G+AY A   + ++ F  +S  +YG  + +++++ +       
Sbjct: 115 ATGHITEMIELIDRLITAGYAYPALDDSGDVYFAATSWADYGELTNQRLEDMEPANDADL 174

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  KK+  DF LWK   P EPG   W +PWGRGRPGWHIECSAMS+ YLG+ FDIHGGGL
Sbjct: 175 R-GKKDARDFALWKAHKPGEPGTASWPAPWGRGRPGWHIECSAMSTKYLGENFDIHGGGL 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A   ++ ANIW+H+G LN+ G KMSKS GN +  +EL       
Sbjct: 234 DLRFPHHENELAQSRAAG--DRFANIWMHSGLLNVGGDKMSKSLGNSVFASELFH----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------------WPQT 340
              +    +R  +    YR  ++F+ + +      L +                   P+ 
Sbjct: 287 --RYSPLAVRFFLTGASYRSILEFSPEAMDRQTASLDRLANFLQRARQTLGEDAPALPEV 344

Query: 341 S---TSKGIIDPA-VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
           S   +++G+  PA   +AL +DL    A+  +     E  K  D          ++    
Sbjct: 345 SDGYSTRGVDVPAEFAAALDDDLGVPRALSVVFATVTEGAKLLDSGQDRSQLTQIVAEVE 404

Query: 387 ASAHILGIEV-----CKEHLNKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLES 437
               ILG+        K   N  +  A++ LV     +R      K F++AD IR  L S
Sbjct: 405 LMLDILGVNPSAEAWAKSGTNATVETALDSLVDALASQRAAAKAEKDFATADAIRDSLAS 464

Query: 438 KGFILED 444
            G ++ED
Sbjct: 465 AGIVIED 471


>gi|149175961|ref|ZP_01854578.1| cysteinyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148845115|gb|EDL59461.1| cysteinyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 518

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 140/342 (40%), Positives = 193/342 (56%), Gaps = 27/342 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL RK  +FQ I P  + +Y+CGPTVY  +HIG+    ++ D + R L Y     
Sbjct: 3   LRIYNTLSRKKEDFQTIKPGKVGIYLCGPTVYKHSHIGHMVGPVIIDTIARYLTY--NNY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITDIDDK+I +A +      +N ++  + +  TQ +  +   +     T  P+
Sbjct: 61  DVKFVNNITDIDDKLINKAAE------LNISVEKLAADMTQDYFDNLETMGVDTITDFPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M  +IQ++I    AY  + ++ F  ++   YG  S RKI+E   GTRV     
Sbjct: 115 ATDYIEAMQEIIQSLIDKDFAYPLDGDVYFSAAADNKYGCLSGRKIEEMIAGTRVEANDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNPADF LWK+S P EP W+SPWG GRPGWHIECSAMS   LG  FDIHGGGLDL+FPH
Sbjct: 175 KKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMFPH 234

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFL---NLEGRKMSKSN--GNFITINELLETKKFG 298
           HENE AQS CC  +       W+HNG +   +  G+   + +  G+     +  E  K  
Sbjct: 235 HENERAQSECCTGKT--YVRYWVHNGLMQASDAAGKVGGQHDRHGDVAVDQQAQEADKLS 292

Query: 299 GRSW-----------PAPVIRLAMLMTHYREPIDFTVQRLTE 329
           G              P  ++RL +L THYR PI F+ + + E
Sbjct: 293 GSKGAASVKELFAVHPPEIVRLFLLSTHYRSPIAFSDENIRE 334


>gi|145296638|ref|YP_001139459.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166200145|sp|A4QH41|SYC_CORGB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|140846558|dbj|BAF55557.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 460

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/472 (33%), Positives = 250/472 (52%), Gaps = 56/472 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + +F+ + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 3   LRIFDTGTRTLRDFKPVQPGHASVYLCGATPQSSPHIGHVRSAVAFDILRRWLMAKGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +     P  + +S       ++F      L  L P+ +PR
Sbjct: 62  -VAFVRNVTDIDDKILTKASEN--GRPWWEWVSTYE----REFTWTYNTLGVLPPSTEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGTRV 179
           AT H+ QMI  +Q +I +G AY  +  + FD ++       +YGS S  ++++ + G   
Sbjct: 115 ATGHVTQMIEYMQRLIDNGFAYAVDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQGE-- 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P+ + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG+ FDIH GGLD
Sbjct: 173 PDNFGKRGPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATYYLGEQFDIHCGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQ+  A   +K AN W+HN ++ + G KMSKS GN + + E+L+  +   
Sbjct: 233 LQFPHHENEIAQAHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLAVPEMLKQVR--- 287

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA---------------EILLSKWP---QT 340
                PV +R  +   HYR  ++++   L+EA               ++ + +W    + 
Sbjct: 288 -----PVELRYYLGSAHYRSVLEYSESALSEAAVGYRRIESFLERVGDVEVGEWTPGFEA 342

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-- 398
           +  + I  P  L+ ++N +   +A  AL K  RE+ K   L     A   +LG +  +  
Sbjct: 343 AMDEDIAVPKALAEIHNAVREGNA--ALDKGDREAAKK--LASSVRAMTGVLGFDPVEWG 398

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    +K + + I   ++ R      K ++ AD +R +L   G  + D
Sbjct: 399 SDAGADGKADKALDVLISSELERRATARAEKNWTVADEVRDRLADAGIEVVD 450


>gi|332884059|gb|EGK04339.1| cysteinyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 491

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 179/506 (35%), Positives = 265/506 (52%), Gaps = 61/506 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK   F+ +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQKLLVYNTLTRKKEVFEPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLENDADEGEDKIAKKARLEQLE-PME-----VVQYYVNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I  I+ I+  G+AYE+N  + FD        +YG  S 
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIEAIKGILKAGYAYESNGSVYFDVEKYNKDYDYGILSH 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I+E    TR +  +  K++  DF LWK++ P     W SPW  G PGWHIECS MS  
Sbjct: 173 RNIEEMLNTTRELDGQEEKRSRVDFALWKKAAPEHIMRWPSPWSDGFPGWHIECSTMSIK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGGLDL+FPHHE EIAQ+   ++  +    W+HN  + + G+KM KS GNF
Sbjct: 233 YLGREFDIHGGGLDLMFPHHECEIAQNTAMEK-HQVVRYWMHNNMITIGGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILL 334
           IT++E    + K   +++    IR  +L  HYR  +DF          +++RL +A   +
Sbjct: 292 ITLDEFFTGSHKMLVQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKSLERLYDAYARI 351

Query: 335 SKWPQTSTSK---GIIDPAVLSALYNDLNTVSAI----QALHKLARESTKN--------H 379
            K P ++TS      I      AL +DLN+   I    +A   +   ST N        +
Sbjct: 352 EKIPVSATSSVDVKNIRNKCYEALNDDLNSAIVIAHLCEAGTTINSASTGNITLSQEDIN 411

Query: 380 DLLPIFNASAH-ILGIE----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
           +L  +F+     ILGI           N+    A++ L++ R    + K ++++D IR +
Sbjct: 412 ELKEVFDIFLFGILGIRNDAIGANSGNNEAFGKAVDLLLEIRQKAKENKDWATSDQIRNE 471

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L   GF ++D      G+    WK K
Sbjct: 472 LAKAGFEIKD------GKDGAEWKLK 491


>gi|309777271|ref|ZP_07672233.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914951|gb|EFP60729.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 446

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 169/474 (35%), Positives = 253/474 (53%), Gaps = 66/474 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +K++N++ +K+ EF+ +    + MYVCGPTVY++ HIGNARP++VFD L R  +   Y  
Sbjct: 2   MKLFNSMNQKVEEFKPLHEHEVHMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAIGYNV 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V+   N TD+DDKII+ A++      +++A   IT K    + KD   L  + P   P
Sbjct: 62  KMVS---NYTDVDDKIIKVAKE----CGVSEAD--ITEKFIDAYNKDRLSLHAMMPDAAP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T  +  +I  I+ ++  G+AYE + ++ F  +S+ +YG  S +++++  +G R+ E  
Sbjct: 113 RVTETMDAIIAFIKLLVDKGNAYEIDGDVYFRVNSVESYGKLSNQQVEDLLVGARIDENS 172

Query: 184 HKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGK--VFDIHGGGLD 239
            K+NP DF LWK++   E G  W+SPW  GRPGWH EC  M +         DIHGGG+D
Sbjct: 173 KKENPLDFTLWKKT---EEGIQWDSPWSVGRPGWHTECVVMINQEFHDEHTIDIHGGGMD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A      AN WIHNG +N++G KMSKS GN I   +++   K GG
Sbjct: 230 LKFPHHENEIAQSRAA-YDSPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMI--AKIGG 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPAV---- 351
                 V+R  ML  HYR P++   + +  A+  L++      Q      + D AV    
Sbjct: 287 N-----VLRWVMLSAHYRAPLNINEEAIETAKKELNRVATAMKQAYVKLNLADVAVAEAY 341

Query: 352 --------LSALYNDLNTVSAIQALH---KLARESTKNHD--------LLPIFNASAHIL 392
                   L A+ +DLNT +A  A+    K+  ++ +  D        LL        +L
Sbjct: 342 DETQLAPFLDAMQDDLNTPNAFAAVFETVKVLNQTLRQRDADLNAVAALLHTLEKMMEVL 401

Query: 393 GIEV-----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           GI++     C+E  +K +    +  V+E       K F++AD  R QL  KG +
Sbjct: 402 GIDIPRLTMCEE--DKQLHKLWKAAVKE-------KDFATADQYRAQLIEKGIL 446


>gi|108804992|ref|YP_644929.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123068971|sp|Q1AU11|SYC_RUBXD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|108766235|gb|ABG05117.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 470

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/476 (35%), Positives = 244/476 (51%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ ++L   + E        + +YVCGPTVY+  HIGN R  + +DV  R LR   G +
Sbjct: 3   VKVRDSLSGGLVEVGG--DGRVGIYVCGPTVYNHIHIGNVRGHLFWDVAVRFLRSR-GYR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITDIDDKII RA +E  S         I  + T  F +    L    P  +PR
Sbjct: 60  -VKFVWNITDIDDKIINRANEEGVSW------KEIVRRYTDSFHERLRLLGIGMPDVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+MI LI+ +I  GHAY A N ++ +   + P YG+ S+++ +E K+ T   +  
Sbjct: 113 ATEHIPEMISLIEELIRRGHAYPAPNGDVYYAVETFPRYGALSKQRPEEMKI-TEKGQTG 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HK+NP DF LWK S P EP WESPWG GRPGWHIECSAM   +L    DIHGGG D+ FP
Sbjct: 172 HKRNPLDFTLWKASKPGEPSWESPWGPGRPGWHIECSAMVEKHLPGGADIHGGGSDIRFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSC A         W H+G + +  +KM+KS GN +   E   T K G     
Sbjct: 232 HHENELAQSCGAHPDRPFVRAWAHHGMVRMAAQKMAKSVGNVVDAREA--TLKHG----- 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTE----AEILLSKWPQTSTSK----------GIIDP 349
              IR+ +L +HY +PID++ + L E     E LL  + + S S+          G +  
Sbjct: 285 RDAIRMWLLQSHYSQPIDYSDEILEEKRRSCERLLRLYREISRSEASSPLSDRLAGELRE 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNASAHILGIEVCK 398
              +A+  D NT  AI AL   A  + +     P                  +LG +V  
Sbjct: 345 RFDAAMREDFNTPEAIAALFDAASGAGREISSRPSAAGEFASLKEALQELLGLLGFDVAG 404

Query: 399 EHLNKNISIAIEKLVQERLILL----------KMKKFSSADYIRKQLESKGFILED 444
           E +++   + I    +    +L          + +++  AD +R++L  +G+ +ED
Sbjct: 405 ERVSEVDGVRIRHAGEAPGEVLERVARRERARRRREWPEADRLREELLREGWAIED 460


>gi|329947309|ref|ZP_08294576.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328525526|gb|EGF52570.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 549

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 167/512 (32%), Positives = 254/512 (49%), Gaps = 90/512 (17%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y++  R +        P  + +Y+CG TV    HIG+ R  I FDVL R L    G 
Sbjct: 46  LRLYDSAARAVVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLER--GG 103

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V  +RN+TDIDDKI+ ++    P +P          +  ++F      L   APT++P
Sbjct: 104 QEVRLIRNVTDIDDKILSKSAAAEPPVPW----WAWAQRFEREFDAAYRALGVAAPTYEP 159

Query: 124 RATNHIPQMIYLIQNIILHGHAY--EANNEIIFDTSSIPNYGSFSRRKI-------DEQK 174
           RAT HIP+MI L+Q ++  GHAY  E+ N + +D  S+P YGS + +++       DE +
Sbjct: 160 RATGHIPEMIDLVQRLLDAGHAYIGESGN-VYYDVRSLPGYGSLTNQRLEDLATTEDESQ 218

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
           +   V  +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECS MS  YLG  F
Sbjct: 219 LDDDV--EADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRPGWHLECSTMSRRYLGDTF 276

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + + EL
Sbjct: 277 DIHGGGIDLRFPHHENEQAQSHGAGW--GFARHWVHNAWVTIKGEKMSKSLGNSLVVAEL 334

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTS 341
           L       + + A V+RLA+   H+R  ++F+ + L +AE L  +          +    
Sbjct: 335 L-------KRYDAAVLRLALGTVHHRSTVEFSDETLADAEALWERLSSAILRAYEFSDDG 387

Query: 342 TSKGIIDPAV-----------LSALYNDLNTVSAIQALH--------KLARESTKNH--- 379
            +  +  PA             +A+  DLN   A+  +H         LA+    +    
Sbjct: 388 GANSVDAPAAQVRARALPAEFTAAMDEDLNLAGAMAVVHATLKALNVALAKAEAGSSSSK 447

Query: 380 -----------DLLPIFNASAHILGIEVCKE----HLNKNISIA--------IEKLVQ-- 414
                      DL     +   +LG++   E    H+   +  +        +++L+Q  
Sbjct: 448 EADADLHESVADLALDLRSQLDVLGLDPLAEPWRTHVLDGVGSSQSGTAMETLDRLIQHD 507

Query: 415 --ERLILLKMKKFSSADYIRKQLESKGFILED 444
             ER      K +  AD +R +L   G ++ED
Sbjct: 508 LDERARARATKDWPRADALRDKLTQAGVVVED 539


>gi|311740178|ref|ZP_07714010.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304733|gb|EFQ80804.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 462

 Score =  265 bits (677), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 175/476 (36%), Positives = 246/476 (51%), Gaps = 55/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           ++IY+T  R   +F+ I P +  +Y+CG T     HIG+ R  + FD+L R LL   Y  
Sbjct: 4   LRIYDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGYD- 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  + P+ +P
Sbjct: 63  --VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVIPPSVEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT  + QM+  +Q +I  G AY A+  + FD ++       +YGS S  K++E + G  
Sbjct: 115 RATGFVTQMVDYMQRLIDAGFAYPADGSVYFDVAAWTKAEGSDYGSLSGNKVEEMEQGE- 173

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+   DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIH GGL
Sbjct: 174 -GEDSAKRGAQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSNFDIHCGGL 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I  +LE  +  
Sbjct: 233 DLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMSGEKMSKSLGNVLSIPNMLELVR-- 288

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA---------------EILLSKWPQTST 342
                 PV +R  +   HYR  ++++   LTEA               ++ L +W Q   
Sbjct: 289 ------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFLGHFDDLELGEWTQGFA 342

Query: 343 SKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
                D AV  AL     TV A  +AL   A +  +   L     A AH+LG +  +   
Sbjct: 343 DAMNDDIAVPKALAEIHTTVRAGNKAL--AAGDEAEARTLAGQVRAMAHVLGFDPLEWED 400

Query: 402 NKNIS---IAIEKLVQ---ERLILLKM-KKFSSADYIRKQLESKGFILEDYKNPDN 450
               S    A++ LVQ   ER    +  K F++AD +R +L + G  + D   PD 
Sbjct: 401 GAQASGADAALDALVQAELERRTQARADKDFATADAVRDRLAAAGITITD--TPDG 454


>gi|13542075|ref|NP_111763.1| cysteinyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|21264017|sp|Q978Z5|SYC_THEVO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 454

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 163/460 (35%), Positives = 244/460 (53%), Gaps = 40/460 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R++ EF  +    + ++VCGPTV D  HIG+AR  I FD + + L+       V
Sbjct: 3   IYNTLTRRLQEFNEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKL--EGYSV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++NITDIDDKII RA++    I  ++   I  S    +F +D  RL   +     RAT
Sbjct: 61  FYLQNITDIDDKIINRAKE--MGIEPSEVAKIYFS----EFQEDMKRLKVDSVNFFARAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I +++  I  ++  G+AYE ++ + F+     +YG  S + +D+   G RV    +K+
Sbjct: 115 LYIDEIVSQISRMMEKGYAYETDDGVYFEVRKFKDYGELSNQSLDQIIAGYRVAVNENKR 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF+LWK+    EP W SPWG GRPGWHIE +A++  Y G  +DIHGGG DLIFPHHE
Sbjct: 175 NPEDFVLWKKKKAGEPSWPSPWGEGRPGWHIEDTAITETYFGDEYDIHGGGSDLIFPHHE 234

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            EIAQ          A+ WIH G +N+   KMSKS  NFITI ++L       + +    
Sbjct: 235 AEIAQMRSISGKRYLAHYWIHTGMININKEKMSKSLKNFITIRDIL-------KDYRPED 287

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPAVLSALY- 356
           +R A+L  +YR  I+F+ + + E++ L+          ++   S +  I   +V+S +  
Sbjct: 288 LRFAILNANYRTQIEFSKELMEESKKLIDYINDTYRKLEYVNGSGNFKIDVNSVISEMRS 347

Query: 357 ---NDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHLNKN 404
              ND +  S I  L  +  E  +N          +L  ++      LGI   K+ ++K 
Sbjct: 348 LAENDFDFHSVIVKLLAITGEINRNFEGINKEVAEELKKVYLWVDTFLGILEQKKEVSKG 407

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I   ++ LV+ R  + K K F  +D IR  L+  G  +ED
Sbjct: 408 I---VDDLVELRTRMRKEKNFLISDAIRDVLKKNGIHIED 444


>gi|218131787|ref|ZP_03460591.1| hypothetical protein BACEGG_03408 [Bacteroides eggerthii DSM 20697]
 gi|217986090|gb|EEC52429.1| hypothetical protein BACEGG_03408 [Bacteroides eggerthii DSM 20697]
          Length = 491

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 176/492 (35%), Positives = 257/492 (52%), Gaps = 54/492 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIALVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTSRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A +     + W+HN  L + G+KM KS GNF
Sbjct: 233 YLGENFDIHGGGMDLIFPHHECEIAQS-VASQGHDMVHYWMHNNMLTVNGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ EL   T     +++    IR   L  HYR  +DF+ + L  AE  L++        
Sbjct: 292 ITLEELFTGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLLP 383
             I PA  S             A+ +DLN+   I  L +        LA   T   + L 
Sbjct: 352 DKITPAATSTVDAKALRAKCYEAMNDDLNSPIVIAHLFEGAKMVNNILAGNDTITAEDLK 411

Query: 384 IFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H+   ++   KE    N          ++ L++ER+     K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEDNASNAEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 472 TALGFEIKDGKD 483


>gi|326332066|ref|ZP_08198351.1| cysteine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325950204|gb|EGD42259.1| cysteine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 469

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 171/479 (35%), Positives = 248/479 (51%), Gaps = 61/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++  R++ +F  + P    +YVCG TV    H+G+ R  + FDVL R LR    E 
Sbjct: 3   LRLYDSATREVRDFTPLQPGKASLYVCGLTVQSEPHVGHVRSGVNFDVLQRWLRASGYE- 61

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             T++RN+TDIDDKI+ + A Q  P    N A  +    +      +  R     PT++P
Sbjct: 62  -TTFIRNVTDIDDKILAKSADQGRPWY--NLAYDMHRELDAAYASLNVAR-----PTYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            AT HIP++I LI+ +I  GHAY A +   ++ FD  S P YG  S +K+D+ +      
Sbjct: 114 LATGHIPEIIALIEELIAKGHAYAAEDGSADVYFDVRSWPAYGELSGQKVDDMEAAADAD 173

Query: 181 EKYHKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            +  K++P DF LWK    S P    W SPWG GRPGWHIECSAM+  YLG  FD HGGG
Sbjct: 174 PR-GKRDPRDFALWKGRKVSEPETASWPSPWGLGRPGWHIECSAMAGKYLGPAFDFHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENE AQS  A R    A+ W+HN ++   G KMSKS GN + I E+L  KK 
Sbjct: 233 LDLRFPHHENEQAQSRAAGR--PFASYWLHNAWITTSGEKMSKSLGNSLVIPEVL--KKV 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTST---SKGII 347
            G       +R  ++  HYR  ++F+ + L EA       E  L +         + G+ 
Sbjct: 289 RGIE-----LRYYLVAAHYRSHVEFSFEALDEAAAGFQRIEGFLDRAASVIGEIPADGVP 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------HILGIE 395
               ++A+ +DL T +A+ ALH++ RE  K   LL   ++ A             ILG++
Sbjct: 344 STDFVAAMDDDLGTPAAVAALHEVVREGNK---LLADGDSPALRGVATSVRAMLDILGLD 400

Query: 396 ----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        E L   + + +  ++ ER      K ++ AD +R +L+  G  +ED
Sbjct: 401 PADPSWGPESGADEKLTGALDVLVRGVLDERAEARAAKDWARADAMRDRLKDAGIEIED 459


>gi|319937669|ref|ZP_08012072.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807104|gb|EFW03718.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 445

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 172/472 (36%), Positives = 249/472 (52%), Gaps = 62/472 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL  K  EF  I    + +YVCGPTVYD AHIGNARP+IVFD+L R    Y G K
Sbjct: 1   MKVFNTLTNKKEEFVPIKQGEVSIYVCGPTVYDHAHIGNARPLIVFDILRRTFE-YLGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD----TTRLACLAPT 120
            VT+V N TD+DDKII+ A++E           I   + T +++K      + L  L PT
Sbjct: 60  -VTFVSNFTDVDDKIIKAAKEE----------GITEKELTDKYIKAYNDIRSGLNLLFPT 108

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           + PR T  +  +I  IQ+++  G AYE + ++ F  + I  YG  S  K+++   G   R
Sbjct: 109 YSPRVTETMQPIIDFIQSLVDQGFAYEVDGDVYFRVTKINEYGMLSGIKVEDLIAGASER 168

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVFDIHGG 236
           V E   K++  DF LWK+ T     +ESPW +GRPGWH EC  M +     G++ DIHGG
Sbjct: 169 VDENDKKESSTDFALWKK-TDEGIQFESPWSKGRPGWHTECVVMINDIFDDGRI-DIHGG 226

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENEIAQS         AN+W+HN  +N++ +KMSKS GN +   +L+ET  
Sbjct: 227 GQDLKFPHHENEIAQSMACHH-HPIANVWMHNQMINIDNQKMSKSLGNVLWAKDLIET-- 283

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQT 340
                    V +  ML THYR P++FT + LT  +  + K                + Q 
Sbjct: 284 -----LGCNVFKWLMLSTHYRNPLNFTEEVLTSVKKEVEKVENVLKQTSLYLQVQHYQQE 338

Query: 341 STSKGIIDPAVLSALYNDLNT-------VSAIQALHKLARESTKNHDLLP----IFNASA 389
             SK  +D  V  AL +DLNT       ++ ++ L++  R   K++ ++           
Sbjct: 339 EYSKETVDTMV-EALSDDLNTSLALTQILNQVKVLNQSMRVKDKDNQVISREYQTLIQML 397

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            ++G     + L+ N  +  EK ++E+      K F  AD +R QL+ +G I
Sbjct: 398 DVMGFVHEMKQLSDNDIVLYEKWLEEK----ANKNFDKADELRGQLQMRGII 445


>gi|87124845|ref|ZP_01080693.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86167724|gb|EAQ68983.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 506

 Score =  265 bits (676), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 159/414 (38%), Positives = 211/414 (50%), Gaps = 62/414 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           ++  NTL R++  F+ +    + +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 3   LRFTNTLSRRMEPFRPLKEGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI+ RA  E  S+        ++ +N   F  D   L  L P   
Sbjct: 61  --AVTFVQNFTDIDDKILNRAADEGSSM------EAVSERNIAAFHADMEALGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
           PRAT  +  +  LI  +   G AY A+ ++ F       YG  S R + EQ+     RV 
Sbjct: 113 PRATRCLDAIRDLIGELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLGEQQTNAEGRVA 172

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGAGRPGWHIECSAMVREELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   ++ A +W+HNG +N+ G KMSKS GNF TI  LLE+    
Sbjct: 233 DLVFPHHENEIAQSEAASG-QELARLWLHNGMVNVGGEKMSKSLGNFTTIRALLES---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----------------LLSKWPQTS- 341
                A  +RL +L  HYR+P+DF+   L  A                      WP  + 
Sbjct: 288 --GLSAMTLRLFVLQAHYRKPLDFSSDALEAASSGWKGLNAALNLGTGHGTALGWPNAAP 345

Query: 342 --------------TSKGIIDPAVL--------SALYNDLNTVSAIQALHKLAR 373
                           KG  DP  L        +A+ +DLN+  A+  + +LAR
Sbjct: 346 LPKGAVVEGSIGLLDQKGSTDPDPLLGLRQRFIAAMDDDLNSSGALAVVFELAR 399


>gi|333029518|ref|ZP_08457579.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740115|gb|EGJ70597.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 491

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 177/496 (35%), Positives = 260/496 (52%), Gaps = 64/496 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++ IYNTL RK   F  +   ++ +YVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MDHQLTIYNTLSRKKELFVPLHAPHVGLYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ KD
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEELE-PME-----VVQYYLNRYHKD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEELNVLPPSIEPHASGHIIEQIQLVKEILKNGYAYESQGSVYFDVAKYDKKYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKAAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQS  A +     + W+HN  + + G KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLIFPHHECEIAQS-VASQGNDMVHYWMHNNMITVNGTKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+ +  + + +   +++    IR  +L  HYR  +DF+          ++RL +A   L
Sbjct: 292 ITLEQFFDGSHELLLQAYSPMTIRFFILQAHYRSTVDFSNEALIASEKGLERLFDAVHRL 351

Query: 335 SKWPQTSTS----KGIIDPAVLSALYNDLNTVSAIQALHKLAR----------------- 373
                + TS    KG +    + A+ +DLNT   I  L   A+                 
Sbjct: 352 DALKVSKTSDVDVKG-LKAKCIEAMNDDLNTPIVISHLFDGAKIINNIFAGNNTISAEDL 410

Query: 374 ESTKNHDLLPIFNASAHILGIEV---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
           E  K+   L +F+    ILG++             S  ++ L+++RLI  + K ++++D 
Sbjct: 411 EELKDTFNLFLFD----ILGMKTENSSSGDREAAYSKVVDMLLEQRLIAKQNKDWATSDQ 466

Query: 431 IRKQLESKGFILEDYK 446
           IR +L S GF ++D K
Sbjct: 467 IRDELTSLGFEIKDTK 482


>gi|317474598|ref|ZP_07933872.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909279|gb|EFV30959.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 491

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 176/492 (35%), Positives = 257/492 (52%), Gaps = 54/492 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIALVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTSRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A +     + W+HN  L + G+KM KS GNF
Sbjct: 233 YLGENFDIHGGGMDLIFPHHECEIAQS-VASQGHDMVHYWMHNNMLTVNGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ EL   T     +++    IR   L  HYR  +DF+ + L  AE  L++        
Sbjct: 292 ITLEELFTGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHK--------LARESTKNHDLLP 383
             I PA  S             A+ +DLN+   I  L +        LA   T   + L 
Sbjct: 352 DKITPAATSTVDAKALRAKCYEAMNDDLNSPIVIAHLFEGAKMVNNILAGNDTITAEDLK 411

Query: 384 IFNASAHILGIEV--CKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H+   ++   KE    N          ++ L++ER+     K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEDNASNAEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 472 TALGFEIKDGKD 483


>gi|296122689|ref|YP_003630467.1| cysteinyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015029|gb|ADG68268.1| cysteinyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 517

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 174/533 (32%), Positives = 255/533 (47%), Gaps = 97/533 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL R+   FQ ++P  ++MY+CGPTVY  AHIG+    ++FD + R L Y   + 
Sbjct: 3   LRVYSTLSRQKETFQTVEPGKVKMYLCGPTVYKPAHIGHMVGPVIFDTVKRYLAYSGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITD+DDK+I +A ++  ++        +  + T  +  +   +   +  H P 
Sbjct: 62  -VTFVVNITDVDDKLINKANEKGMTV------EALAKQMTDDYFDNLKLMGVDSIDHFPY 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  M+ +I  ++  G+AY  N ++ F  +   +YG  SRR ++E   GTR      
Sbjct: 115 ATDHIGDMLDMIGKLVEKGYAYPLNGDVYFRCTKDEDYGKLSRRSLEEMLTGTRAESMGG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF LWK S P EP W+SPWG+GRPGWHIECSAMS   LG   DIHGGGLDL+FPH
Sbjct: 175 KESPADFALWKGSKPGEPAWDSPWGKGRPGWHIECSAMSKKILGDSIDIHGGGLDLMFPH 234

Query: 245 HENEIAQ--SCCADRIEKTANIWIHNGFLNLEGRKM-------SKSNGNFITINELLETK 295
           HENE+AQ  SC        A  W+HNG +   G+          K +       +L  ++
Sbjct: 235 HENELAQSESCTGHPF---ARYWMHNGLMQASGQAGKVGGQHDKKGDAESQIAGKLAGSQ 291

Query: 296 KFGGRSWPAPV--------IRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------- 337
             G  S    V        +R  +L THYR PIDF+++R+ E    L  +          
Sbjct: 292 --GAESVKTAVFAHHHPETVRFFLLATHYRSPIDFSLERIAETGKSLEGFFRLFELYERL 349

Query: 338 -----------PQTSTSKGI----------------IDPAVLSALYNDLNTVSAIQALHK 370
                       + S SK I                +    L A+ +D NT  A+  L +
Sbjct: 350 TKKNFYSLIPAAKRSDSKPITAETPDQQAFATELNGLKDRYLDAMDDDFNTGGAVGLLFE 409

Query: 371 LAR-------------ESTKNHDLLPIFNASAHI----LGIEVCKEHLNKNISI------ 407
           + R              +    DL  + +A   +    L + V +E   K  S       
Sbjct: 410 MRRVINGFISEKKLETGAGSAADLQLLTDAMTLVRELGLLLGVFREPRAKESSADDGLLD 469

Query: 408 -AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             ++ ++Q R    K K F+ AD IR +L     ILED   PD     T WK+
Sbjct: 470 GLMQLIIQIRADARKSKNFAVADLIRNKLTELKLILED--RPDG----TLWKK 516


>gi|76799247|ref|ZP_00781419.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76585400|gb|EAO61986.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 320

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 137/338 (40%), Positives = 199/338 (58%), Gaps = 27/338 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y     
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEY----- 56

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   V Y+ N TD+DDKII+ A +              + K    F++D   L     T 
Sbjct: 57  CGYQVNYISNFTDVDDKIIKGAAEAGMDT------KSFSDKFISAFMEDVAALGVKPATK 110

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV 179
            PR  +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G   RV
Sbjct: 111 NPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRV 170

Query: 180 P-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG 
Sbjct: 171 DGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS GNFIT++++L     
Sbjct: 231 DLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML----- 283

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
             +S    VIR  +    YR+P++FT + + +AE+ L+
Sbjct: 284 --KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLN 319


>gi|16331016|ref|NP_441744.1| cysteinyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2500966|sp|P74330|SYC_SYNY3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1653511|dbj|BAA18424.1| cysteinyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 483

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 167/487 (34%), Positives = 244/487 (50%), Gaps = 63/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++L R     Q + P  + MY CG TVYD+ H+G+AR  I +D++ R L++   E 
Sbjct: 3   LRLYDSLTRAKQPLQPLHPGLVTMYCCGITVYDYCHLGHARTCITWDLVRRYLQWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA  E  ++        ++ K    + +D   L        PR
Sbjct: 62  -VRYVQNFTDIDDKILKRAVDESSTM------EAVSEKFIAAYFEDMEALGVQPADLYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV--- 179
           AT+ +  +  LI  +   G+AY +  ++ +   +   YG  S R++++ + G   RV   
Sbjct: 115 ATHTLDGIKRLIAELEAKGYAYPSGGDVYYSVRNFDGYGKLSGRRLEDLQAGASGRVTVA 174

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P+   K++P DF LWK + P EP WESPWG+GRPGWHIECSAM   +LG+  D+H GG 
Sbjct: 175 DPDGAQKQDPFDFALWKSAKPGEPAWESPWGKGRPGWHIECSAMVREFLGETIDLHVGGN 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNF TI  LL+T    
Sbjct: 235 DLIFPHHENEIAQSEAVTG-QPLAQYWLHNGMVKVDGEKMSKSLGNFTTIRALLKTVD-- 291

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSKGI--------- 346
                   IRL +L  HYR+P+DFT   +   T     L +  Q     G          
Sbjct: 292 -----PMAIRLLVLQGHYRKPLDFTETAIAAATNGWHTLREGLQFGYDYGGDFGWELAFT 346

Query: 347 -IDP-------AVLSALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLP-- 383
            + P       A   A+ +D N    +  + +LA+              +  + DLL   
Sbjct: 347 PLGPDANQWTVAFQEAVDDDFNFAGGLAVMFELAKHLRSEGNKLKFEGSTPADLDLLQTQ 406

Query: 384 --IFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                + A ILG+ +  E  + N        IE+LV +R    K K ++  D +R  L+ 
Sbjct: 407 WITLVSLAEILGLSINPESQSSNDNGLTDGDIEQLVAQRTQARKDKNWAEGDRLRDVLQE 466

Query: 438 KGFILED 444
            G  L D
Sbjct: 467 AGITLVD 473


>gi|237784960|ref|YP_002905665.1| cysteinyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259511827|sp|C4LH17|SYC_CORK4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|237757872|gb|ACR17122.1| Cysteinyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 473

 Score =  265 bits (676), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 156/479 (32%), Positives = 247/479 (51%), Gaps = 59/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+++  R++ +F  +      +Y+CG TV    HIG+ R  + FD+L   L Y   + 
Sbjct: 3   LRIFDSASRQLRDFVPLREGRASVYLCGATVQSAPHIGHLRSGVAFDILRNWLTYMGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A  EH     N       +   ++F     +L    P+ +P 
Sbjct: 62  -VAFIRNVTDIDDKILNKA-AEH-----NRPWWEWAATYEREFQWAYDQLGVTPPSLEPH 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+MI  +Q II  GH Y  +  +     S+P+YGS S +K+DE   G        
Sbjct: 115 ATGHVPEMIEYMQRIIDAGHGYAVDGNVYLSPMSLPDYGSLSGQKLDEMDQGESAGTG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W++PWGRGRPGWH+EC+ M++ YLG  FDIH GGLDL FPH
Sbjct: 173 KRDPRDFTLWKAAKPGEPSWDTPWGRGRPGWHLECTTMATKYLGAEFDIHAGGLDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN +++  LL+  +        
Sbjct: 233 HENEIAQAHAAG--DGFARYWMHNGWVTMAGEKMSKSLGNVLSVPNLLQIVR-------- 282

Query: 305 PV-IRLAMLMTHYREPIDFTVQRLTEAEI---LLSKWPQTSTS----------KGIIDPA 350
           PV +R  +   HYR  ++F+   L EA      L K+   ++S          +  +  A
Sbjct: 283 PVELRYYLGSAHYRSMLEFSEDALREAAAGYRRLEKFVHAASSVAGKNDRTLGRSEVTDA 342

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---------------HILGIE 395
              A+ +D+   +A+  +HK+ R S    D     ++ A                +LG++
Sbjct: 343 FTDAMNDDIGVPAALAEVHKVVRSSNSRLDAARRGDSDAVESVVSAGEQVRAMLGVLGVD 402

Query: 396 VCKEHLNKNIS------IAIEKLVQERLILLKM----KKFSSADYIRKQLESKGFILED 444
              E   +  +       A++ LV+  L +       K +++AD +R +L + G ++ D
Sbjct: 403 PLDEKWQEIAAESGAEHDALDTLVRAELDIRAKARAEKDWATADAVRDRLAAAGIVVTD 461


>gi|224536743|ref|ZP_03677282.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521659|gb|EEF90764.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 491

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 177/492 (35%), Positives = 255/492 (51%), Gaps = 54/492 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+  A   I      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PMEVAQYYIN-----RYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L+P+ +P A+ HI + I L++ I+ +G+AY +   + FD        +YG  S 
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYVSEGSVYFDVEKYNKDYHYGKLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQAEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  A +     + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQS-VASQGNDMVHYWMHNNMITINGQKMGKSYGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           I ++E    T K   +++    IR  +L  HYR  +DF+ + L  AE  L++        
Sbjct: 292 INLDEFFNGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLTRMMDAVNGL 351

Query: 345 GIIDPAVLS-------------ALYNDLNTVSAIQALHKLAR--------ESTKNHDLLP 383
             I P+  S             A+ +DLNT   I  L   AR          T   D L 
Sbjct: 352 EKITPSATSSVDVKAVREKCYEAMNDDLNTPIVIAHLFDGARMINNIIAGNDTITADDLK 411

Query: 384 IFNASAH-----ILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               + H     ILG++       +        ++ L++ER+     K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEENNSNEEREVAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 472 TALGFEIKDGKD 483


>gi|14325506|dbj|BAB60409.1| tRNA synthetase Cys [Thermoplasma volcanium GSS1]
          Length = 472

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 163/460 (35%), Positives = 244/460 (53%), Gaps = 40/460 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R++ EF  +    + ++VCGPTV D  HIG+AR  I FD + + L+       V
Sbjct: 21  IYNTLTRRLQEFNEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKL--EGYSV 78

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++NITDIDDKII RA++    I  ++   I  S    +F +D  RL   +     RAT
Sbjct: 79  FYLQNITDIDDKIINRAKE--MGIEPSEVAKIYFS----EFQEDMKRLKVDSVNFFARAT 132

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I +++  I  ++  G+AYE ++ + F+     +YG  S + +D+   G RV    +K+
Sbjct: 133 LYIDEIVSQISRMMEKGYAYETDDGVYFEVRKFKDYGELSNQSLDQIIAGYRVAVNENKR 192

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF+LWK+    EP W SPWG GRPGWHIE +A++  Y G  +DIHGGG DLIFPHHE
Sbjct: 193 NPEDFVLWKKKKAGEPSWPSPWGEGRPGWHIEDTAITETYFGDEYDIHGGGSDLIFPHHE 252

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            EIAQ          A+ WIH G +N+   KMSKS  NFITI ++L       + +    
Sbjct: 253 AEIAQMRSISGKRYLAHYWIHTGMININKEKMSKSLKNFITIRDIL-------KDYRPED 305

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPAVLSALY- 356
           +R A+L  +YR  I+F+ + + E++ L+          ++   S +  I   +V+S +  
Sbjct: 306 LRFAILNANYRTQIEFSKELMEESKKLIDYINDTYRKLEYVNGSGNFKIDVNSVISEMRS 365

Query: 357 ---NDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHLNKN 404
              ND +  S I  L  +  E  +N          +L  ++      LGI   K+ ++K 
Sbjct: 366 LAENDFDFHSVIVKLLAITGEINRNFEGINKEVAEELKKVYLWVDTFLGILEQKKEVSKG 425

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I   ++ LV+ R  + K K F  +D IR  L+  G  +ED
Sbjct: 426 I---VDDLVELRTRMRKEKNFLISDAIRDVLKKNGIHIED 462


>gi|260435038|ref|ZP_05789008.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412912|gb|EEX06208.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 493

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 142/322 (44%), Positives = 188/322 (58%), Gaps = 19/322 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L +   E 
Sbjct: 3   LRLTNTLTRRTEPFTPLTPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKI++RA +E      N +++ ++ +N   F +D   L  L P   PR
Sbjct: 62  -VTFVQNFTDIDDKILKRAGEE------NSSMTEVSERNIASFHQDMDALGILRPDRMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP-- 180
           AT  +  +  LI  +   G AY A  ++ F       YG  S R + EQ+     RV   
Sbjct: 115 ATQCLDGIRALIGELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQDNAAGRVADA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EEARKQHPFDFALWKGAKPGEPSFPSPWGEGRPGWHIECSAMVRAELGDTIDIHLGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   +  A +W+HNG +N+ G+KMSKS GNF TI  LLE+      
Sbjct: 235 VFPHHENEIAQSEAATG-QDLARVWMHNGMVNVGGQKMSKSLGNFTTIRALLESGV---- 289

Query: 301 SWPAPVIRLAMLMTHYREPIDF 322
              A  +RL +L  HYR+P+DF
Sbjct: 290 --SAMTLRLFVLQAHYRKPLDF 309


>gi|317507827|ref|ZP_07965528.1| tRNA synthetase class I catalytic domain-containing protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316253869|gb|EFV13238.1| tRNA synthetase class I catalytic domain-containing protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 477

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 241/472 (51%), Gaps = 47/472 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + EF  +    + +Y+CG TV    H+G+ R  +VFDVL R L+    + 
Sbjct: 3   LRLYDTRTRVVREFHPLREGQVSIYLCGATVQGRPHVGHLRSAVVFDVLRRWLQAKGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN+TDIDDKI+ +A +               + + + F     RL  L P+ +PR
Sbjct: 62  -VLFARNVTDIDDKILVKAAE------AGRPWWEWAATHERAFASAYDRLGVLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+  I+ +I  GHAY    ++ FD  S+P YG  S  ++D+   G    E   
Sbjct: 115 ATGHITQMVDCIERLIERGHAYTGAGDVYFDVRSLPEYGKLSGHQLDDVHQGESAAEG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W +PWG GRPGWH+EC+AM++ YLG  FDIH GG+DL+FPH
Sbjct: 173 KRDPRDFTLWKGAKPGEPWWPTPWGPGRPGWHLECTAMATTYLGSEFDIHCGGMDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQ+  A   +  A  W+HNG+L+L G KMSKS GN +++ ELL   +        
Sbjct: 233 HENELAQARGAG--DSFARFWLHNGWLSLGGEKMSKSLGNVLSLEELLTAVR-------P 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSAL 355
             +R  +   HYR   +F+ + + EA +   +               + G +     SAL
Sbjct: 284 QELRYYLGCAHYRSTQEFSFEAVIEAAVAYKRLESFVLRAADEYGEIALGEVTGDFASAL 343

Query: 356 YNDLNTVSAIQALHKLARES-TKNHDLLP-------IFNASAHILGIE-----VCKEHLN 402
            +DL    A+  L + A++  T+  +  P          A   +LG +            
Sbjct: 344 DDDLAVPKALAELQRHAKQGNTELAERKPGAAATAASVRAMLAVLGCDPFDPIWASGREE 403

Query: 403 KNISIAIEKLVQERLILLKM----KKFSSADYIRKQLESKGFILEDYKNPDN 450
           K   +A++ LV+  L   +     K +++AD +R +L   G  + D   PD 
Sbjct: 404 KAALVALDVLVEAELSRREAARADKDWATADEVRDRLRKAGIDVTD--GPDG 453


>gi|145596731|ref|YP_001161028.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145306068|gb|ABP56650.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 471

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 173/474 (36%), Positives = 249/474 (52%), Gaps = 52/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T    + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L  +  E 
Sbjct: 3   LRLYDTATHSVRDFVPREAGKVGIYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAHGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A      + ++     I   N  +       L  L PT++PR
Sbjct: 62  -VRFIRNLTDIDDKILVKA------VELDLPYWSIAYANELKLTAAYRALNVLPPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT HIP+M  LI  +I  GHAY A +   ++ FD  S P YG+ S +   + +     P+
Sbjct: 115 ATGHIPEMQQLIAELIDAGHAYPATDGSGDVYFDVHSWPAYGALSNQSPGDMQPAGDAPD 174

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF LWK + P EP    W SPWGRGRPGWHIECSAM   YLG  FDIHGGGL
Sbjct: 175 RC-KRDPRDFALWKGAKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGSEFDIHGGGL 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A      A  W+H+G LN+ G KM KS GN +   +L      G
Sbjct: 234 DLTFPHHENELAQSQAAGL--PFARYWVHHGLLNIGGAKMGKSCGNTL---DLTYVDSLG 288

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWPQTSTSK------GIID 348
            R    PV +R      HYR  ID++   L EA +    +  + Q ST +      G++ 
Sbjct: 289 VR----PVELRYYYTAAHYRSVIDYSEDALREAAVAYRRIEGFVQRSTERVGAGQPGVVP 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARES----TKNHDL-----LPIFNASAHILGIEVCKE 399
            A  +A+ +DLNT +A+  LH+  R+     T   D+     L    A   ILG++    
Sbjct: 345 AAFAAAMDDDLNTSAALAVLHETVRDGNTALTGGDDVTVRTALGQVRAMLDILGVDPLDP 404

Query: 400 HLNK-----NISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILED 444
             +      ++   ++ LVQ    +R      K +S+AD IR QL+  G ++ED
Sbjct: 405 AWSAGGGTDDLGAVVDSLVQLALEQRAQARSRKDWSAADAIRDQLKQAGVVVED 458


>gi|220911630|ref|YP_002486939.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254765174|sp|B8HCR7|SYC_ARTCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219858508|gb|ACL38850.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 488

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 171/488 (35%), Positives = 238/488 (48%), Gaps = 62/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T   ++  F  +      +Y CG TV    H+G+ R  I FD L R L +  G +
Sbjct: 3   LRFYDTASAEVRNFVPLVAGRASLYYCGATVQGMPHVGHIRSAIAFDQLTRWLTHR-GLR 61

Query: 65  CVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            VT VRN+TDIDDKI+ ++        Q  P     +    +  +  Q+F+K    L   
Sbjct: 62  -VTVVRNVTDIDDKILAKSEASFASGFQPEPGEIPGEEWWALAYRYEQEFLKAYDALGVS 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQK 174
            PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ ID+ +
Sbjct: 121 RPTYEPRATGHIPEMHALIQQLIDRGHAYPALDDSGDVYFDVRSWSKYGALTRQNIDDMQ 180

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
                  +  K++P DF LWK S   EP    W SPWG GRPGWH+ECSAM + YLG  F
Sbjct: 181 AAADADPR-GKRDPRDFALWKGSKEGEPATASWASPWGAGRPGWHLECSAMVTKYLGTEF 239

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  EG KMSKS GN I+  E+
Sbjct: 240 DIHGGGLDLRFPHHENEMAQSQAAG--HPFANFWMHNGMVTYEGEKMSKSIGNTISPAEM 297

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE--------ILLSKWPQTSTS 343
           LE            V+R  +   HYR  +D+    L EA          L     +  T 
Sbjct: 298 LELAS-------PRVVRYYLGQAHYRSILDYRPTSLQEAAAAVERIDGFLAKAVARFGTD 350

Query: 344 KGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH--- 390
            G ++           A  +A+ +DLN   A+ ALH+  R    N  L    + SA    
Sbjct: 351 FGFVEGDYGPSTGAVEAFYAAMDDDLNVPRALAALHETVR--AGNTALADGDDDSARKAM 408

Query: 391 --------------ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                         + G E       + +++ +E  +  R      K +S++D IR  L 
Sbjct: 409 NAVVIMTDVLGLNAVAGSEKTSTREAEALAVLVEAQLAARATARAEKDWSASDAIRDTLN 468

Query: 437 SKGFILED 444
             G ++ED
Sbjct: 469 EAGVVVED 476


>gi|150399135|ref|YP_001322902.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166200152|sp|A6UP68|SYC_METVS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150011838|gb|ABR54290.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 475

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 161/477 (33%), Positives = 239/477 (50%), Gaps = 53/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+ +    F+ ++   +++YVCGPTVYD  HIG+ R  + FD++ R L +     
Sbjct: 2   LRIYNTITKSEEVFKTLNNEEVKIYVCGPTVYDETHIGHGRTYVSFDIIRRYLEHI--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA      + +N     I+ K  + F+ D   L        P+
Sbjct: 60  SVKLVINFTDIDDKIINRA------LNLNVTPKKISEKYIEIFLNDMKTLNVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +IP++I  I  +I  G AY+ ++ + F+     +YG  S   ++      ++  K  
Sbjct: 114 VTENIPEIISFIDKLIEKGFAYKTDSGVYFEIEKFKDYGKLSNINLENLISEDKLESKSE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN  DF LWK     EP W+SP+G GRPGWHIECS MS  YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNRFDFALWKNKKSGEPYWKSPFGDGRPGWHIECSVMSMKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI+E+        + +  
Sbjct: 234 HENEIAQSSAYSG-KNWVNYWVHTGFVMVNGEKMSKSLGNFVTISEI-------SKKYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPA------------ 350
            V+RL  +  HY+ PID+T + +  A+  L K      S    + +P             
Sbjct: 286 EVLRLFFIQRHYKSPIDYTEESMEHAKASLQKLYNVIESVRIALENPVNSVWDENEAFFY 345

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNASA 389
                       A+ +D N+V+A++ + +++   TK   +            L  F    
Sbjct: 346 NVLKNSKINFYRAMDSDFNSVNALKTVFEVSNSVTKYLSVSKSPNVALLIKTLDFFKNVG 405

Query: 390 HILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            I G+     + + N+     I+ LV  R  L   K + ++D IR  L+  G+ +ED
Sbjct: 406 EIFGLFEGYFYKSSNVKEESLIKFLVDLRDDLRSKKNYETSDKIRDGLKELGYQIED 462


>gi|116328522|ref|YP_798242.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331250|ref|YP_800968.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281004|sp|Q04SB0|SYC_LEPBJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|122283690|sp|Q050D6|SYC_LEPBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116121266|gb|ABJ79309.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124939|gb|ABJ76210.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 474

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 170/493 (34%), Positives = 246/493 (49%), Gaps = 57/493 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YG 62
           +I+ YN+L  K  +F   +P  + +Y CGPTVY+FAHIGN R  +  DVL R L+   YG
Sbjct: 3   EIQFYNSLSGKKEKFSPANPHRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V    NITDIDDKII        SI    +I   T+  T+ F +D   ++     H 
Sbjct: 63  ---VDMTMNITDIDDKII------RDSIASQKSIQEFTTPWTEAFFEDLKTVSAEFLEHY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PE 181
           P+AT  IP+MI +IQ +   G  YE +  + F       YG  S+      K GTR   +
Sbjct: 114 PKATESIPEMIQIIQRLQNQGLVYEKDENLYFSIQKFEGYGKLSKIDTSGMKTGTRYDTD 173

Query: 182 KYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +Y K++  DF+LWK      E  W++  G GRPGWH+ECSAM     G   DIH GG+DL
Sbjct: 174 EYDKEDVRDFVLWKSPKRKGEASWKTSVGTGRPGWHLECSAMIRKIYGSGVDIHTGGVDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   E     W+H+  L +EG+KMSKS GNF T+ +L+      G+
Sbjct: 234 LFPHHENEIAQSEGAFPEESFVRTWLHSEHLLVEGQKMSKSKGNFYTLRDLV------GQ 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGI-IDPA---- 350
                 IR  ++  HYR  ++F+  R+ EA   + K           ++ + IDP+    
Sbjct: 288 GLDPKAIRFLLISAHYRSKLNFSTDRIAEASANIRKIQNCLDRLLDIAQNVKIDPSYSFN 347

Query: 351 ----------VLSALYNDLNTVSAIQALHKLAR------ESTKN-------HDLLPIFNA 387
                        +L +DLN   A+  + +  +      +S KN       ++ + I   
Sbjct: 348 DELTLRWKKEFEESLADDLNVSKALAVVFESLKTINAFLDSKKNRVAEISANEFIQILAY 407

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+   +   +  I   I+ L+QER    K K F+ +D IR QL ++G ++ED K+
Sbjct: 408 YDRIFGVLNFESQKDPLIDSEIDSLIQERQTARKNKDFARSDAIRDQLLAQGILIEDTKD 467

Query: 448 PDNGQRMTRWKQK 460
                   RW++K
Sbjct: 468 G------IRWRRK 474


>gi|320450390|ref|YP_004202486.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150559|gb|ADW21937.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 481

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 174/490 (35%), Positives = 261/490 (53%), Gaps = 67/490 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+TL+R   +F    P ++ +YVCGPTVY   H+G+AR  IV+DVL R L  + G +
Sbjct: 3   LRIYDTLQRSKVDFTPATPGHVGIYVCGPTVYSDPHLGHARGPIVYDVLRRYL-LHLGYR 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V +V NITD+          +DKI  RA+ E    P+      +  K T  +    T L
Sbjct: 62  -VRFVSNITDVGHLTDDADQGEDKIERRAKLERLE-PME-----VAEKYTWSYFDAITAL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P+  PRA+ HIP+ I L + ++  G AYE    + F   + P YG  S ++++E +
Sbjct: 115 NVLRPSIAPRASGHIPEQIELTERLLKLGFAYERKGSVYFRVRAFPEYGKLSGKRLEELR 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKV 230
            G RV  +  K++P DF LWK +   EPG    W+SPWG G PGWHIEC+AMS  YLG+ 
Sbjct: 175 AGARVEVREEKEDPLDFALWKAA---EPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEG 231

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIH GG+DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++
Sbjct: 232 FDIHAGGIDLQFPHHECEIAQAEAAGY--RFARHWMHHNHVLLEGEKMAKSTGNLVLLHD 289

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSKGI 346
           LL+  +          +R  +L THYR P+DFT + L  A+     LL  + +  T    
Sbjct: 290 LLKAHE-------PMALRFYLLQTHYRSPMDFTWEGLEAAKRGYARLLQAYREVRTRLNA 342

Query: 347 IDPAV---------------LSALYNDLNTVSAIQA-------LHKLARESTKN--HDLL 382
             P +               L A+ +DL+T  A+ A       L+KL  E+ ++      
Sbjct: 343 AHPGITPELERALDALEKDFLEAIEDDLSTPEALAAFFTFLPELNKLLPEAKRDTLRRTA 402

Query: 383 PIFNASAH-ILGI---EVCKEHLNK-NISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
            +F+     ILG+    V +E ++   +   +  L++ R    + K ++ +D IR++L+S
Sbjct: 403 QVFHTLGEGILGLFPERVLEEKVSGPLLEGLVALLLELREEARRAKDYAKSDLIRERLKS 462

Query: 438 KGFILEDYKN 447
            G I+ED K 
Sbjct: 463 LGIIVEDTKE 472


>gi|297621589|ref|YP_003709726.1| Cysteinyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376890|gb|ADI38720.1| Cysteinyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 484

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 160/479 (33%), Positives = 255/479 (53%), Gaps = 58/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K +NT+ R    F+ I  + + +Y CGPTVY+FAHIGN R  +  D+L R L+++  E 
Sbjct: 15  LKFFNTITRSKDPFKPISGNRVSLYTCGPTVYNFAHIGNYRTYMFEDLLRRTLKFFGYE- 73

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N+TD+DDK I  A +++ S+   DA    T    + F +D   L      H P 
Sbjct: 74  -VEQVMNLTDVDDKTIRGATEQNVSL---DAY---TKPFKEAFFEDIRTLNIEPAEHYPA 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT++I QMI +I+ ++  G AY  A+  + +   +   YG  S  KIDE K G       
Sbjct: 127 ATDYIDQMIAMIEKLLEKGAAYRGADGSVYYAIETFKRYGCLSHLKIDELKSGASDRVAS 186

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N ADF+LWK   P   G   W+SP+G+GRPGWH+ECS M+   LG+  D+H GG
Sbjct: 187 DEYEKDNVADFVLWKSYDPERDGKIYWDSPFGKGRPGWHLECSTMAMQILGETIDLHCGG 246

Query: 238 LDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           +D +FPHHENEIAQS  C+   +    +W+H+  L +E +KMSKS GNF T+ +LLE   
Sbjct: 247 VDNMFPHHENEIAQSEACSG--QTFVKMWLHSEHLIIENKKMSKSLGNFFTLRDLLE--- 301

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSK------ 344
              + +    +R  +L THY+  ++FT + L   +  L +        Q  T +      
Sbjct: 302 ---KGYSGKQVRYILLQTHYKTQLNFTFEGLEAVKHSLQRLQDFVYRLQGVTGRETHHAL 358

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLAR--------------ESTKNHDLLPIFN 386
                       + L +DLN   A+ +L++L R              ++ +  +LL  FN
Sbjct: 359 DALLDQALLGFANGLADDLNISVALASLYELVRDVNGLIDQGKLGEGDANRVLELLKRFN 418

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +   ++  E+ +E +  ++  A++    +R+   + K +S AD +R  ++S+G+++ED+
Sbjct: 419 SVLGVIDFEMKEESIPDDLIQALD----DRIAARQNKDWSEADRLRDYIQSRGYVIEDF 473


>gi|146304825|ref|YP_001192141.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|187631639|sp|A4YIG5|SYC_METS5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145703075|gb|ABP96217.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 465

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/478 (33%), Positives = 250/478 (52%), Gaps = 57/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL +++  F+  +P+ ++MYVCGPTVYD  HIG+ R  + FD + R LR      
Sbjct: 1   MQVFNTLGKRLQSFEPHEPNTVKMYVCGPTVYDEVHIGHGRTFVAFDAMSRYLRV--KGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+NITDIDDKII +AR+      +  + + ++   ++ +++    L      H P+
Sbjct: 59  NVVRVQNITDIDDKIINKARE------LGKSWNEVSEYYSKSYLEHIGALKVKIDMH-PK 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I  +Q +I  GHAY AN  + FD  + P YG  S  K +E   G  + ++  
Sbjct: 112 VTTHIKEIIDFVQRLIDSGHAYVANGSVYFDVDTYPGYGELSNVKKEEWDQGEEIVKE-- 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL+FPH
Sbjct: 170 KRHPYDFALWKAYKPGEPYWESPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGMDLVFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+            W+H  FL +   KMSKS GN + + E L   K+G      
Sbjct: 230 HENERAQTESLTG-STWVKYWMHVAFLTIRKEKMSKSKGNIVPLKEAL--SKYG-----P 281

Query: 305 PVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGI------ID 348
             +R   L + YR PI++          ++QRL +A  +L K  Q   +         + 
Sbjct: 282 STLRYWFLSSQYRNPIEYSEEILEQSSRSLQRLKDAISVLRKIIQKGPAHYAKEEDVKVQ 341

Query: 349 PAVLSA-------LYNDLNTVSAIQALHKLA----RESTKNHDLLPI---------FNAS 388
             ++ A       + ND +T +A+ ++H++A     +   + D+            FN  
Sbjct: 342 EEIVRAISRFDEHMENDFDTSNALTSIHEIASIVFSKLQYSEDVFGALIALDGFRKFNEV 401

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             ++  E   E L++ ++  I+ +++ R  L K + +  +D IR  L   G  + D K
Sbjct: 402 FAVMDEEFSAE-LDR-LTKVIDAVIEVRNYLRKKQMYDLSDQIRDILSRSGVKILDSK 457


>gi|296118937|ref|ZP_06837510.1| cysteine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968035|gb|EFG81287.1| cysteine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 473

 Score =  264 bits (674), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 164/471 (34%), Positives = 246/471 (52%), Gaps = 52/471 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + +F+ I P +  +Y+CG T     HIG+ R  + FD++ R L     + 
Sbjct: 14  LRIFDTATRSLRDFEPITPGHASIYLCGATPQAKPHIGHLRSGVAFDIVRRWLMAQGLD- 72

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A  EH     N       S   ++F K    L  L P+ +PR
Sbjct: 73  -VAFVRNVTDIDDKILNKA-AEH-----NRPWWEWVSTYEREFTKAYNTLGVLPPSVEPR 125

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQKMGTRV 179
           AT  +PQM+  +Q +I  G AY +   + FD ++  N     YGS S  ++++ + G   
Sbjct: 126 ATGFVPQMVEYMQRLIDRGFAYASEGSVYFDVAAWVNAEGSDYGSLSGNRVEDMEQGE-- 183

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +   K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIHGGGLD
Sbjct: 184 TDVIGKRSPQDFALWKAAKPGEPSWPTPWGAGRPGWHLECSAMSTYYLGSSFDIHGGGLD 243

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A   +  ANIW+HN ++ + G KMSKS GN + ++ LL+  +   
Sbjct: 244 LQFPHHENEIAQSHAAG--DGFANIWMHNHWVTMAGEKMSKSLGNVLAVDNLLDIVR--- 298

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAVL 352
                  +R  +   HYR  ++++   LTEA       E  L+++   +   G       
Sbjct: 299 ----PQELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEEFLARFDDVAL--GEWTDGFE 352

Query: 353 SALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNAS----AHILGIEVCKEHLNK 403
            A+ +D +   A+  +H   RE  K     + D       S    A ILG +      ++
Sbjct: 353 KAMNDDFSVPKALAEIHVAVREGNKALSASDEDTARTLAESVRRMAEILGFDPLSHQWSE 412

Query: 404 NIS------IAIEKLVQ---ERLILLKMKK-FSSADYIRKQLESKGFILED 444
             S       A++ LVQ   ER    + +K ++ AD +R +L   G  + D
Sbjct: 413 GASDDSAALDALDVLVQAELERRAQARAEKNWAVADEVRDRLAQAGITVTD 463


>gi|288930998|ref|YP_003435058.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288893246|gb|ADC64783.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 467

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 255/493 (51%), Gaps = 72/493 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ +KI E + +D + +RMYVCG T YD++HIG+ R ++ FD L R L +  G K
Sbjct: 1   MKIYDTMSKKIVELK-LDKT-VRMYVCGITAYDYSHIGHGRNIVFFDTLRRFLEFK-GHK 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII RA      I +      +      +F KD   L      H P+
Sbjct: 58  -VIFVQNFTDVDDKIIRRA------IELGKTAKEVAEFFISEFWKDAEALNYKKGLH-PK 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            T++IP++I  ++ +I  G+AYE  +    ++ F       YG  S   ++E       P
Sbjct: 110 VTDYIPKIIEFVKALIEKGYAYEVESKYGKDVYFHVPRFEKYGELSGYSVEELNRHRIEP 169

Query: 181 EKYHKKNPADFILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++  KK+  DF LWK +       +  ++SPWG+GRPGWHIECS MSS  LG  FDIHGG
Sbjct: 170 DE-RKKDVKDFALWKSAKEEDFKAKSVYDSPWGKGRPGWHIECSVMSSELLGVPFDIHGG 228

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DLIFPHHENE AQS     +E     W+HN F+ + G KMSKS GN + I + +   K
Sbjct: 229 GMDLIFPHHENERAQSYALFGVE-PVRYWVHNNFVTINGEKMSKSLGNIVRIRDAV--NK 285

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKW--------------- 337
           +GG      V+R  +L+ HYR P+D++ + L  A    E LL+                 
Sbjct: 286 YGG-----EVLRFFLLLAHYRSPLDYSEKALERAKKSYEYLLNTLRNLDMEIAYLKTFGE 340

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL--GIE 395
            +  + K  ++  V +AL ND+NT  AI  +H  A E  KN     +F AS   L    E
Sbjct: 341 RREGSVKSYMNEFV-NALENDMNTPKAIAVMHNFAAEINKN-----LFEASLEALEKAFE 394

Query: 396 VCK---------EHLNKNISIAIE--KLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             K         E   +   +  E  +L++ER +  K + F  AD IR++   KG  L D
Sbjct: 395 ELKTMGYVFGIFEKYTRVPVLGEEDVRLIKERELARKERDFDKADKIREKFREKGIYLVD 454

Query: 445 YKNPDNGQRMTRW 457
            K      + TRW
Sbjct: 455 TK------KGTRW 461


>gi|19553839|ref|NP_601841.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391480|ref|YP_226882.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|24418686|sp|Q8NMD7|SYC_CORGL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21325413|dbj|BAC00035.1| Cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41326821|emb|CAF21303.1| CYSTEINE TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 460

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 153/468 (32%), Positives = 242/468 (51%), Gaps = 48/468 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + +F+ + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 3   LRIFDTGTRTLRDFKPVQPGHASVYLCGATPQSSPHIGHVRSAVAFDILRRWLMAKGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +     P  + +S       ++F      L  L P+ +PR
Sbjct: 62  -VAFVRNVTDIDDKILTKASEN--GRPWWEWVSTYE----REFTWTYNTLGVLPPSTEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGTRV 179
           AT H+ QMI  +Q +I +G AY  +  + FD ++       +YGS S  ++++ + G   
Sbjct: 115 ATGHVTQMIKYMQRLIDNGFAYAVDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQGE-- 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P+ + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG+ FDIH GGLD
Sbjct: 173 PDNFGKRGPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATYYLGEQFDIHCGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQ+  A   +K AN W+HN ++ + G KMSKS GN + + E+L+  +   
Sbjct: 233 LQFPHHENEIAQAHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLAVPEMLKQVR--- 287

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLS 353
                PV +R  +   HYR  ++++   L+EA +   +        G ++     P    
Sbjct: 288 -----PVELRYYLGSAHYRSVLEYSESALSEAAVGYRRIESFLERVGDVEVGEWTPGFEV 342

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCK------ 398
           A+  D+    A+  +H   RE     D         L     A   +LG +  +      
Sbjct: 343 AMDEDIAVPKALAEIHNAVREGNAALDKGDREAAEKLASSVRAMTGVLGFDPVEWGSDAG 402

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                +K + + I   ++ R      K ++ AD +R +L   G  + D
Sbjct: 403 ADGKADKALDVLISSELERRATARAEKNWAVADEVRDRLADAGIEVVD 450


>gi|332637987|ref|ZP_08416850.1| cysteinyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 471

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 168/493 (34%), Positives = 252/493 (51%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K +NT+  +   F  I+   I MYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   MKTFNTMSLEKETFTPINEKTINMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A ++  ++P       +  K    F +DT  L     T +PR
Sbjct: 61  -VNYVSNFTDVDDKMIAAASEQGITVPE------LADKYIDAFNEDTAPLNIKPATVRPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP-- 180
           AT HIP++I  ++++I  G+AYE+  ++ F       YG  + + + E +     R+   
Sbjct: 114 ATEHIPEIIEFVEDLIKKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMESNAAGRLDDG 173

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK  +      W SPWG+GRPGWHIECS MS+ YLG   DIHGGG+D
Sbjct: 174 ELARKEDPMDFAVWKGENGDGAIAWNSPWGKGRPGWHIECSVMSTKYLGNHLDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHH NEIAQ+  A   EK    W+HNGF+ +  E  KMSKS GNF T++ELL+    
Sbjct: 234 LAFPHHTNEIAQT-EAHTGEKFVEKWLHNGFVTVGDENEKMSKSLGNFTTVHELLQQID- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------WPQTSTSKG 345
                   V+R  +  T YR PI ++ + +  A   L +                + S  
Sbjct: 292 -----DPMVLRFFIATTQYRRPIAYSQKNMDLAARNLERIRTGYRNLQFRLGSAVAGSDA 346

Query: 346 IIDP-------AVLSALYNDLNTVSAIQALHKL------------ARESTKNHDLLPIFN 386
            I+        A + A+ +D N  +A+ A+++L             +  T N  L  I +
Sbjct: 347 DIEAKAQEKVDAFVEAMDDDFNAQNAMTAVYELIELANLYSQAEEVKTDTVNFVLKQIKD 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              ++ G++  ++     +   ++ L++ER    +   F+ +D IR +L S+G ILED  
Sbjct: 407 L-MNVFGVDGLEQA--PLLDADVDALIKERDAARETSNFARSDEIRDELASRGIILEDTP 463

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW++
Sbjct: 464 ------QGTRWRR 470


>gi|302338662|ref|YP_003803868.1| cysteinyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635847|gb|ADK81274.1| cysteinyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 474

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 166/476 (34%), Positives = 247/476 (51%), Gaps = 43/476 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           KI +YNT+ R++ EF+ I+   ++MY CGPTVY+FAHIGN R  +  DVL R+  Y  G 
Sbjct: 2   KILLYNTMGREVQEFKPIEDGLVKMYTCGPTVYNFAHIGNLRTYVFEDVLRRVFEYA-GF 60

Query: 64  KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           K V +V NITD+    DD      + E  S     ++  I    T  F +DT RL  + P
Sbjct: 61  K-VEHVMNITDVGHLTDDADEGEDKMEKSSRESGKSVWEIAKYYTDAFFRDTDRLNIIRP 119

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T  PRAT HI  MI LI+ +   GH Y+A   + F   + P+YG  +     + + G R+
Sbjct: 120 TVAPRATEHIDDMIALIKRLEEGGHTYQAGGNVYFSIDTFPDYGRLALLDRQDLQAGARI 179

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               +K+NP DF+LW  ++  E     W+SPWG+G PGWHIECSAMS  YLG+ FDIH G
Sbjct: 180 EVDSNKRNPHDFVLWFTNSKFENHAMLWDSPWGKGYPGWHIECSAMSIRYLGEQFDIHCG 239

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIAQ+  A   ++    W+H  FL +   KM+KS GNF+T+  L++   
Sbjct: 240 GVDHIPVHHTNEIAQAEAATG-KQWVQYWVHGEFLLMNKGKMAKSAGNFLTLQSLVD--- 295

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSK-----------W---- 337
              + +     R   L  HYR  + F+ + L  A    E L+S+           W    
Sbjct: 296 ---KGYHPLDYRYFCLGGHYRSQLQFSFESLDAAKSARERLVSRIAVLREELGDCWKEAI 352

Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
              P  + SK +      +A+  D+N   A+  L +L +   +  + L + +A   +LG+
Sbjct: 353 ALPPSAAGSKFL--ERFEAAVGQDMNMPKALAELWQLLKSELQPGEKLSVVSAMDRVLGL 410

Query: 395 EVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +    +   + +    IE+L+++R      K F  AD IR +L ++G  ++D  N
Sbjct: 411 NLLALPQHATDSSEDREIEELIEQRNAARSRKDFHLADEIRDKLSARGISIKDTPN 466


>gi|254444496|ref|ZP_05057972.1| cysteinyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258804|gb|EDY83112.1| cysteinyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 475

 Score =  263 bits (673), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 170/484 (35%), Positives = 252/484 (52%), Gaps = 56/484 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K++  +NTL RK         + + MY CGPTVY  AHIGN R  +  DV+ R+L+   G
Sbjct: 2   KQVTFHNTLSRKAEPIVPTKGNVVGMYCCGPTVYAQAHIGNFRTFLAQDVMRRVLQTA-G 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V +VRNITD+DDK I R      SI     ++  T   TQ F  D  R   LAP  +
Sbjct: 61  YK-VIHVRNITDVDDKTIAR------SIEEGRQLTEFTEHWTQIFHADCERFNMLAPQIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P+AT HI + I +I+ +I  GHAY +++  + F  SS   YG  SR K  E+++ T  P 
Sbjct: 114 PKATEHIAEQIAMIEQLIQRGHAYASDDGSVYFRVSSFDEYGKLSRLK--ERQLLTDAPA 171

Query: 181 -------EKYHKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVF 231
                  ++Y + + ADF++WK   P +    W+SPWG+GRPGWH+ECSAM+  YLG   
Sbjct: 172 NDTPVDSDEYTRDSAADFVMWKSRKPTDGDVYWDSPWGQGRPGWHLECSAMAMKYLGNNL 231

Query: 232 DIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           DIH GG+DL FPHHENEIAQS C     +K    WIH   L ++G+KMSKS  NF T+++
Sbjct: 232 DIHSGGVDLTFPHHENEIAQSECSCGHEKKFFKYWIHAAHLLVDGQKMSKSLDNFYTVDD 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGI 346
           +        + +P  V+R A+    YR+ I+FT+  L  A+  L +  + S       G+
Sbjct: 292 I------AAKGYPPVVLRYALTSGAYRQTINFTLDTLGAAQSALVRLKKFSDELLAEAGL 345

Query: 347 IDPAVLSA--------------------LYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
              +VL                      L +D+N   A+ A+    +       L+P F+
Sbjct: 346 KRASVLKEIAKGKHLHDDWDPFADAWKKLTHDMNIAGALGAIFTAIKAKPGPEALIP-FH 404

Query: 387 ASAHILGIEVCKEHLNK---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                LG ++ +  + K   ++   I+ L Q+R    + K +++AD +R +L + G+   
Sbjct: 405 KLIFALGYDLDQVVIEKPKVDVPEDIKILAQKRWDAKQAKDWATADALRDELAAAGWKAL 464

Query: 444 DYKN 447
           D K+
Sbjct: 465 DRKD 468


>gi|149196426|ref|ZP_01873481.1| cysteinyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140687|gb|EDM29085.1| cysteinyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 463

 Score =  263 bits (673), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 163/468 (34%), Positives = 242/468 (51%), Gaps = 49/468 (10%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+   F  I+    R+Y CGPTVY++AHIGN R  +  D+L R+L+    +  VT V 
Sbjct: 1   MSREAEPFTPINEGEARLYTCGPTVYNYAHIGNFRAYVFEDLLRRVLKL--NDYKVTQVM 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N+TD+DDK I  +++    + +ND  +I      + F +D  +L      H P AT+HIP
Sbjct: 59  NLTDVDDKTIRDSQK--AGMSLNDFTAIYK----KAFFEDLEKLNVEPAEHYPAATDHIP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIF-DTSSIPNYGSFSRRKIDEQKMGTRV-PEKYHKKNP 188
           QMI +IQ ++  G+AY A+++ ++       +YG  ++   D Q  GTRV  ++Y K++ 
Sbjct: 113 QMIDMIQTLVDKGYAYLADDKCVYYSIDKFEHYGCLAKIDRDNQMSGTRVKTDEYEKESV 172

Query: 189 ADFILWKR--STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +DF LWK       +  W+SPWG GRPGWHIECSAM+   LG  FD+H GG+D +FPHHE
Sbjct: 173 SDFALWKAWDKADGDVKWDSPWGEGRPGWHIECSAMAKATLGDHFDMHTGGVDNMFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           +EIAQS  A+   K  N W+H   L +   KMSKS GNF T+ +L E      + W    
Sbjct: 233 DEIAQSEAANGC-KYVNYWMHCAHLRINNAKMSKSLGNFYTLAQLTE------KGWAGAE 285

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPA----------- 350
           +R  +L THYR  ++F V+   E    LS      T      + I D A           
Sbjct: 286 VRYMLLATHYRAGLNFVVETGAEKSESLSNARAAITRLQNFIERIKDKADGELSSELSEL 345

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG-------IEV 396
                   L +L +DLN   A+  +    RE  +  D     N  A +         ++V
Sbjct: 346 CAKAQDEFLDSLNDDLNISGALGKMFDFIREGNRILDSNETVNQEALLNTLKYFNRILDV 405

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            K  L+ ++   I  L +ER      K +  +D IR QL+++G+++ED
Sbjct: 406 MKFDLDNDVPAEILALAEERQQARADKNWGRSDEIRDQLKAQGWVIED 453


>gi|118472553|ref|YP_890296.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|187629830|sp|A0R558|SYC_MYCS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118173840|gb|ABK74736.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 477

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 158/470 (33%), Positives = 236/470 (50%), Gaps = 46/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T+   + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 16  LRLYDTMAGAVRDFVPLRPGHASIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTANGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A       P  +  +       + F      L  L P+ +PR
Sbjct: 75  -VAFIRNVTDIDDKILNKAAD--AGRPWWEWAATFE----RAFSAAYDALGVLPPSAEPR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ LI+ +I  GHAY A  ++ FD  S+P+YG  S  +ID+   G  V     
Sbjct: 128 ATGHITQMVELIERLIDKGHAYAAGGDVYFDVLSLPDYGQLSGHRIDDVHQGEGVATG-- 185

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+FPH
Sbjct: 186 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGPEFDIHAGGMDLVFPH 245

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN ++I  +L+  +       A
Sbjct: 246 HENEIAQAHGAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR-------A 296

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQ--TSTSKGIIDPAVLSAL 355
             +R  +   HYR  ++F+   L +A       E  L +      S   G   P   +AL
Sbjct: 297 AELRYYLGSAHYRSMLEFSETALQDAVKAYTGIEDFLHRVCSRVGSVPIGEWTPKFAAAL 356

Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN---- 402
            +DL+   A+  +H    E  +  D               A   ILG +   E       
Sbjct: 357 NDDLSVPIALAEIHAARAEGNRALDSGDHQTAMQQASSIRAMMDILGCDPLNERWESRDA 416

Query: 403 -----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                K + + ++  +  R    + + +++AD IR +L+  G  + D  +
Sbjct: 417 TSAALKAVDVLVQWALASRAEARERRDWAAADAIRDRLKEAGIEVTDTAD 466


>gi|163857764|ref|YP_001632062.1| cysteinyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163261492|emb|CAP43794.1| cysS [Bordetella petrii]
          Length = 516

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 174/498 (34%), Positives = 246/498 (49%), Gaps = 57/498 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+   P  +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR   G K
Sbjct: 32  LHIYNTLSRTKEPFKPAQPGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRAS-GLK 90

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 91  -VDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 143

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +  +G AY A++ ++ +       YG  S + +D+ + G RV    
Sbjct: 144 ATQYVGEMLDIIGRLEQNGLAYRADDGDVNYAVRGFDGYGKLSGKALDDLRAGERVAVGS 203

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W+SP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 204 AKRDPLDFVLWKAAKADEPDDTKWQSPYGLGRPGWHIECSAMSRALLGLPLDIHGGGPDL 263

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------E 293
            FPHHENEIAQ+  A      AN W+H G L ++  KMSKS GNF TI + +       +
Sbjct: 264 KFPHHENEIAQTEGA-FGGVLANTWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGEAPAD 322

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---- 349
             ++      A ++R  ++  HYR P ++T   L +A+  L +  Q   +    D     
Sbjct: 323 QAEYAVNPREAEMLRFFIVRNHYRSPQNYTPHNLADAQSALDRLYQALLNVAPDDAGLDW 382

Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTK--------------------NHDLLP 383
                 A  +A+ +D NT  A+ AL +LA E+ +                      D   
Sbjct: 383 NEPQAQAFKAAMDDDFNTSGAVAALFELASEANRTRSARSAGQLKSLAALLGLLQQDPAR 442

Query: 384 IFNASAH--ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            F  +      G+           +  IE L+  R    + + ++ AD IR QL   G  
Sbjct: 443 YFQCATRYSAAGLAQAATPSASLDAGQIETLIAARAAAKQARDYAEADRIRAQLREAGIE 502

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           L+D      GQ  T+W++
Sbjct: 503 LDDKP---GGQ--TQWRR 515


>gi|24214563|ref|NP_712044.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|30316164|sp|Q8F525|SYC_LEPIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24195528|gb|AAN49062.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 471

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 167/494 (33%), Positives = 247/494 (50%), Gaps = 62/494 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YG 62
           +I+ YN+L  +  +F   DP+ + +Y CGPTVY+FAHIGN R  +  DVL R L+   YG
Sbjct: 3   EIQFYNSLSGRKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V    NITDIDDKII        SI    +I   T+  T+ F +D   ++     H 
Sbjct: 63  ---VDMTMNITDIDDKII------RDSIASKKSIIEFTAPWTKAFFEDLKTVSAEILEHY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PE 181
           P+AT+ IP+M+ +IQ +   G  Y+ +  + F      NYG  S+      K GTR   +
Sbjct: 114 PKATDSIPEMVDIIQKLQKKGLVYKKDESLYFSIQKFQNYGKLSKIDTSGMKTGTRYDTD 173

Query: 182 KYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +Y K++  DF+LWK      E  W++  G GRPGWH+ECSAM     G   DIH GG+DL
Sbjct: 174 EYEKEDVRDFVLWKSPKLEGETSWDTLVGTGRPGWHLECSAMIRKVYGSGVDIHTGGVDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   E     W+H+  L ++G+KMSKS GNF T+ +L++      +
Sbjct: 234 LFPHHENEIAQSEGAFPEESFVKTWLHSEHLLVDGQKMSKSKGNFYTLRDLIQ------Q 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY---- 356
                 IR  ++ THYR  ++F+  R+ EA   + K          ++P + +  Y    
Sbjct: 288 GLDPKAIRFLLISTHYRSKLNFSTDRIAEASANIRKIQNCLDRILELEPDIKADFYFLFS 347

Query: 357 ----------------NDLNTVSAIQALHKLARE-----STKNHD---------LLPIFN 386
                           +DLN   A+  + +  ++      T   D         +L  F+
Sbjct: 348 IPFVQTWKKEFEESLADDLNISKALAVVFESVKQINSLLDTNQSDSKQRIEYIQILAYFD 407

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               +L  E  K+ L+      I+ L++ER I  K K F+ +D IR QL ++G ++ED K
Sbjct: 408 RILGVLNFESKKDLLDSE----IDSLIEERQIARKNKDFARSDAIRDQLLAQGILIEDTK 463

Query: 447 NPDNGQRMTRWKQK 460
                    RW++K
Sbjct: 464 EG------IRWRKK 471


>gi|300790490|ref|YP_003770781.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299800004|gb|ADJ50379.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 435

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 154/446 (34%), Positives = 232/446 (52%), Gaps = 48/446 (10%)

Query: 30  VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-EHP 88
           +CG TV    HIG+ R ++ +DVL R L   +    V  VRN+TDIDDKI+ +A + E P
Sbjct: 1   MCGATVQGVPHIGHVRGVLNYDVLRRWL--VHSGLDVLLVRNVTDIDDKILTKAAENERP 58

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
                       + + + F     +L CL P+  PRAT H+ QM+ L++ +I  GH Y A
Sbjct: 59  WWEWG-------ATHERAFETAYDQLGCLPPSINPRATGHVTQMVELMERLIESGHGYVA 111

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           + ++ F   S   YG  S + +++ + G   P +  K++P DF +WK + P EP W +PW
Sbjct: 112 DGDVYFSVKSFDEYGKLSGQVLEDVQQG-ETPTR-GKRDPRDFTMWKSAKPGEPSWPTPW 169

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWH+ECSAM++ YLG  FDIHGGG+DL+FPHHENE AQS      +  A  W+HN
Sbjct: 170 GNGRPGWHLECSAMATAYLGAEFDIHGGGIDLVFPHHENERAQSNAVG--DAFARFWLHN 227

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++ + G KMSKS GN ++I  +L+  +       AP +R  ++  HYR  I+++   ++
Sbjct: 228 AWVTMSGEKMSKSLGNTVSIPAMLDRYR-------APELRYYLVQPHYRSTIEYSDTAVS 280

Query: 329 EA-------EILLSKWPQTS-TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------- 373
           EA       E  L +         GII  A  +AL +DL T  A   +H   R       
Sbjct: 281 EAAQGYRRIETFLRRAAAAGDVPVGIIPEAFANALDDDLATPQAFAVVHTTVRDGNAALD 340

Query: 374 --ESTKNHDLLPIFNASAHILGIEVCKEHLN----------KNISIAIEKLVQERLILLK 421
             +++K  +      A   +LG++      +          + +S  +E L+ ER     
Sbjct: 341 AGDTSKALEFAAAVRAMTDVLGLDPLSARWSEAGGSETPTKEALSRIVEGLLAERQQARA 400

Query: 422 MKKFSSADYIRKQLESKGFILEDYKN 447
            K F+ AD  R +L+  G ++ED  N
Sbjct: 401 EKDFARADAARDRLQQAGIVVEDTPN 426


>gi|78186099|ref|YP_374142.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|109894917|sp|Q3B6D2|SYC_PELLD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78166001|gb|ABB23099.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 483

 Score =  263 bits (672), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 171/492 (34%), Positives = 246/492 (50%), Gaps = 75/492 (15%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I+N+L R+   F+ + P  + +YVCGPTVY  AH+G+A+  + FDV+ R LR   G + V
Sbjct: 5   IFNSLGREKQLFEPLHPGVVGIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRES-GYR-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            YV+NITD+          +DKI  +AR E    P+      I    T+ F+ D  RL  
Sbjct: 63  KYVQNITDVGHLSDDADEGEDKIARQARLEKTD-PME-----IAQFYTRSFLDDMDRLGV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKIDEQKM 175
           L P   P AT HIP+ I L+  ++  GHAYE N  + F   S P YG  S R  +D  + 
Sbjct: 117 LRPNISPLATGHIPEQIALVDKLVKRGHAYEVNGNVYFSVESFPGYGKLSGRTDLDAVQS 176

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVF 231
           G RV  +  K NP+DF LWK++   E G    W+SPWG G PGWH+ECSAMS  YLG   
Sbjct: 177 GARVGVRSEKHNPSDFALWKKA---EEGHLMQWDSPWGMGYPGWHLECSAMSMKYLGDTI 233

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG++  FPHHE EIAQS  A+  +     W+HN  + + G KM KS  N + + E+
Sbjct: 234 DIHGGGMENRFPHHECEIAQSEAANE-KPYVRYWMHNNMVTVNGTKMGKSLKNAVNLKEI 292

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSK 344
            +T            +R  +L +HYR P+D++   +  +   L K  +T       +   
Sbjct: 293 FKTVD-------PLAVRFFILQSHYRSPLDYSDTAVAGSTAGLQKLRETRQRLIEATPGT 345

Query: 345 GIIDPAVLS-----ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---------- 389
           G++D A  S     A+ +D NT  AI AL   ++      D     NAS+          
Sbjct: 346 GLLDAAPFSLRFREAMDDDFNTPVAIAALFDFSKALNTALDRPDGLNASSLEAARELFST 405

Query: 390 ---HILGIEV------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
               +LGI                E L++ + + +E   + R    K K F+++D IR  
Sbjct: 406 AAVTVLGIMTEDAEGGMHDGGRSAETLDEVMGVLMELRSEAR----KNKDFATSDLIRDH 461

Query: 435 LESKGFILEDYK 446
           L + G  ++D +
Sbjct: 462 LLAAGIEIKDTR 473


>gi|260437953|ref|ZP_05791769.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809704|gb|EFF68909.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 472

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 174/477 (36%), Positives = 247/477 (51%), Gaps = 48/477 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+  +NTL RK+ +F       + MY CGPTVY FAHIGN R  I+ D+L + LRY 
Sbjct: 1   MENKVYFFNTLTRKVEQFIPNVDGKVAMYTCGPTVYHFAHIGNLRSYIMEDILEKTLRYV 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V  V NITD+          +DK+++ A++EH ++        I    T  F  D
Sbjct: 61  GYD--VKRVMNITDVGHLTSDADTGEDKMLKGAKREHKTV------MEIAKYYTDAFFDD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
             +L    P     ATN IP+ I +++ ++   +AY A   + FDTS + +Y  FS +  
Sbjct: 113 CRKLNIKRPDVVEPATNCIPEFINMVKVLLEKDYAYIAGGNVYFDTSKLDDYYVFSSQSE 172

Query: 171 DEQKMGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
            E  +G R  V E  +KKN ADF+LW    +    E  W+SPWG G PGWHIECS +S  
Sbjct: 173 KELMVGVRDDVSEDINKKNKADFVLWFTKSKFDNQELKWDSPWGVGYPGWHIECSCISMK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           +LG+  DIH GG+D IFPHH NEIAQS  A    K  N W H   LN +  KMSKS G F
Sbjct: 233 HLGEYMDIHCGGVDNIFPHHTNEIAQS-EAYLGHKWCNYWFHVHHLNDKSGKMSKSKGEF 291

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL---TEAEILLSKWPQTST 342
           +T++ LLE K +        V RL  L +HYR+P++F+ + L   T A   L K      
Sbjct: 292 LTVS-LLEEKGYN-----PLVYRLFCLQSHYRKPLEFSYEVLDNMTTAYNKLIKKIGELK 345

Query: 343 SKGIIDPAVLSALYN--------DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
           + G +D    +   N        DLNT SAI  ++ + R    +   L +  +   +L +
Sbjct: 346 ADGSVDEEAFAGFRNKFEDAICSDLNTSSAITVIYDVLRSDINDVTKLELIKSFDEVLSL 405

Query: 395 EVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILED 444
           ++ K+H N   S    +L       ++ER    K K F+ AD IR +L +KG  ++D
Sbjct: 406 DLLKDHGNDKESSVDSELKEYILAKIEERKAAKKEKDFAKADAIRDELAAKGIQIKD 462


>gi|320101049|ref|YP_004176641.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753401|gb|ADV65159.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 484

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 181/488 (37%), Positives = 245/488 (50%), Gaps = 74/488 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           +K+Y+TL R + E + ++P  ++MYVCGPTVYD+ HIG+ +  +++D   R L  R Y+ 
Sbjct: 8   VKVYDTLSRGLKELRPVEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLSLRGYH- 66

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITDIDDKII R+ +E          + I  + T+ ++    +L  +   H 
Sbjct: 67  ---VVHVMNITDIDDKIIRRSHEE------GRDWNEIVEEYTRDYISALEKL-NVKVDHH 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR + HI ++I  IQ +I  G+AY A +  + FD     +YG  S R+      G     
Sbjct: 117 PRVSEHIDEIIRFIQGLIDKGYAYVAPSGSVYFDVDKYEDYGRLSGRE-SRDTWGQEQEF 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF LWK + P EP WESPWG+GRPGWHIECS MSS YLG  FDIHGGG DLI
Sbjct: 176 LSEKKNPYDFALWKAAKPGEPYWESPWGKGRPGWHIECSVMSSRYLGSRFDIHGGGTDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS      +   +IW+H+G + +   KMSKS  N + + E  +  K+G   
Sbjct: 236 FPHHENERAQSEAYFGSKPWVSIWMHSGLVMVGKDKMSKSLKNIVPLKEAFD--KWG--- 290

Query: 302 WPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGII---D 348
            P P +RL  L THYR+P+ F            +RL  A  LL K  + ++        D
Sbjct: 291 -PMP-LRLWYLSTHYRKPLYFFEEALENAVKLYERLVTAAQLLGKLSREASGLHYARDED 348

Query: 349 PAVLS-----------ALYNDLNTVSAIQAL----------------HKLARESTKNHDL 381
             V S           AL +D NT  A+ A+                H L   S K   L
Sbjct: 349 LKVFSQLVSLHRRFHEALSDDFNTAEAMAAVNEYLTILFRDIQHNPRHLLVSTSIK---L 405

Query: 382 LPIFNASAHILGIEV-----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
           L  FN+   +L  E+      +  L+  I I    LV  R  L K   +  +D IR  L 
Sbjct: 406 LREFNSVLGVLDKELEAVGEAEALLDSVIGI----LVNVRRELRKRGLYDLSDAIRSDLS 461

Query: 437 SKGFILED 444
             G  L D
Sbjct: 462 KIGIQLMD 469


>gi|116071086|ref|ZP_01468355.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. BL107]
 gi|116066491|gb|EAU72248.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. BL107]
          Length = 499

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 174/502 (34%), Positives = 247/502 (49%), Gaps = 78/502 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L +   E 
Sbjct: 3   LRLTNTLTRRTEPFTPLRPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWSGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKI++RA  E      N +++ ++ +N   F  D   L  L P   PR
Sbjct: 62  -VRFVQNFTDIDDKILKRASDE------NSSMTAVSERNIDAFHADMDSLGILRPDSMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP-- 180
           AT  +  +  LI+ +   G AY A  ++ F       YG  S R + EQ+   G RV   
Sbjct: 115 ATQCLDGIRALIRELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQENAGGRVADA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EGARKQHPFDFALWKAAKEGEPSFPSPWGAGRPGWHIECSAMVRAELGDTIDIHLGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   ++ A +W+HNG +N+ G+KMSKS GNF TI  LLE       
Sbjct: 235 VFPHHENEIAQSEAATG-QELAQVWMHNGMVNVGGQKMSKSLGNFTTIRALLE------- 286

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQR----------------LTEAEILLSKWPQTSTS 343
           S  +P+ +RL +L  HYR+P+DFT +                 L E      +WP T   
Sbjct: 287 SGVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERHGQSLEWPATPAL 346

Query: 344 K--GIIDPA-------------VLSALYNDLNTVSAIQALHKLAR-------------ES 375
               ++ P+              + A+ +DLN+  A+  L  LA+              +
Sbjct: 347 APVALVGPSNHPSEPLEPLQQRFIDAMDDDLNSSGALAVLFDLAKPLRALANRLERGDRA 406

Query: 376 TKNHDLLP-------IFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKM 422
            +  D L        +    A +LG+      E      +      I+  +  R+     
Sbjct: 407 DRPADELAALALRWRLLRDLAAVLGLRCEADSETSGPGDDSTNQDEIQAAIDARIAAKSA 466

Query: 423 KKFSSADYIRKQLESKGFILED 444
           K ++ AD IR++L+++G  L D
Sbjct: 467 KNYAEADRIREELKAQGIELID 488


>gi|45657880|ref|YP_001966.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798557|sp|Q72QT1|SYC_LEPIC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|45601121|gb|AAS70603.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 471

 Score =  263 bits (672), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 168/494 (34%), Positives = 246/494 (49%), Gaps = 62/494 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YG 62
           +I+ YN+L  +  +F   DP+ + +Y CGPTVY+FAHIGN R  +  DVL R L+   YG
Sbjct: 3   EIQFYNSLSGRKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V    NITDIDDKII        SI    +I   T+  T+ F +D   ++     H 
Sbjct: 63  ---VDMTMNITDIDDKII------RDSIASKKSIIEFTAPWTKAFFEDLKTVSAEILEHY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PE 181
           P+AT+ IP+M+ +IQ +   G  YE +  + F      NYG  S+      K GTR   +
Sbjct: 114 PKATDSIPEMVDIIQKLQKKGLVYEKDESLYFSIQKFQNYGKLSKIDTSGMKTGTRYDTD 173

Query: 182 KYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +Y K++  DF+LWK      E  W +  G GRPGWH+ECSAM     G   DIH GG+DL
Sbjct: 174 EYEKEDVRDFVLWKSPKLEGETSWYTLVGTGRPGWHLECSAMIRKVYGSGVDIHTGGVDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   E     W+H+  L ++G+KMSKS GNF T+ +L++      +
Sbjct: 234 LFPHHENEIAQSEGAFPEESFVKTWLHSEHLLVDGQKMSKSKGNFYTLRDLIQ------Q 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY---- 356
                 IR  ++ THYR  ++F+  R+ EA   + K          ++P + +  Y    
Sbjct: 288 GLDPKAIRFLLISTHYRSKLNFSTDRIAEASANIRKIQNCLDRILELEPDIKADFYFLFS 347

Query: 357 ----------------NDLNTVSAIQALHKLARE-----STKNHD---------LLPIFN 386
                           +DLN   A+  + +  ++      T   D         +L  F+
Sbjct: 348 IPFVQTWKKEFEESLADDLNISKALAVVFESVKQINSLLDTNQSDSKQRIEYIQILAYFD 407

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               +L  E  K+ L+      I+ L++ER I  K K F+ +D IR QL ++G ++ED K
Sbjct: 408 RILGVLNFESKKDLLDSE----IDSLIEERQIARKNKDFARSDAIRDQLLAQGILIEDTK 463

Query: 447 NPDNGQRMTRWKQK 460
                    RW++K
Sbjct: 464 EG------IRWRKK 471


>gi|229496784|ref|ZP_04390495.1| cysteinyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316330|gb|EEN82252.1| cysteinyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 491

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 181/503 (35%), Positives = 255/503 (50%), Gaps = 76/503 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+    +YNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+LYR L + 
Sbjct: 1   MEHPFYLYNTLSRKKEQFIPVAAPHVGMYVCGPTVYGDAHLGHARPAITFDILYRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DK+ ++AR E    P+      +T     ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEADADDGEDKVAKKARLEQLE-PMEVVQFYLT-----RYRHA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+  G+AYE+   + FD         YG  S 
Sbjct: 113 MEALNVLPPSIEPMASGHIIEQIRLVEEILKAGYAYESKGSVYFDVEKFNREKGYGKLSG 172

Query: 168 RKIDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR  + +  K+NP DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIEDMLSNTRTLDGQDEKRNPLDFALWKCAKPEHLMHWPSPWSEGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG +FDIHGGG+DL+FPHHE EIAQ+  A   E     W+HN  + +EG+KM KS GNF
Sbjct: 233 YLGDLFDIHGGGMDLVFPHHECEIAQAEAAMGHE-LVRYWMHNNMITIEGKKMGKSYGNF 291

Query: 286 ITINELLETKKFGG------RSWPAPVIRLAMLMTHYREPIDFT----------VQRLTE 329
           IT++E      F G       ++    IR  +L  HYR  +DF+          + RL +
Sbjct: 292 ITLDEF-----FAGSHPKLTEAYSPMTIRFFILGAHYRGTVDFSNEALQAARKGLMRLLD 346

Query: 330 AEILLSKWPQTSTSKGIIDP-----AVLSALYNDLNTVSAIQALHKLA---------RES 375
           A  LL K    +TS    DP     +   A+ +DLNT   I  L   A          ES
Sbjct: 347 ANALLDKLTPGATS--TFDPKEIEKSAQEAMNDDLNTPIVIATLFDAATKINRLRNGEES 404

Query: 376 TKNHDL--------LPIFNASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKK 424
               DL        L +F+    ILG++  +E  +        A++ L++ R      K 
Sbjct: 405 LTQDDLAELKRVFRLYLFD----ILGLQDERESSSSGAEAYKGAMDLLMEIRKTAKDNKD 460

Query: 425 FSSADYIRKQLESKGFILEDYKN 447
           ++++D IR +L   GFI++D K 
Sbjct: 461 WATSDKIRDRLAELGFIVKDTKQ 483


>gi|322437023|ref|YP_004219235.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164750|gb|ADW70455.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 492

 Score =  263 bits (671), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 179/511 (35%), Positives = 248/511 (48%), Gaps = 76/511 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  ++      D + +RMY CGPTVYD+ HIGN R  I  DVL R L+    E 
Sbjct: 3   LELFNTLGGRVESLTPADGAVLRMYACGPTVYDYGHIGNFRTFIHVDVLRRYLKQTGIE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDKII  A      +PI D     T K    F +D   L    P   PR
Sbjct: 62  -VKHVMNITDVDDKIIRNAAL--LKMPIED----YTRKYEDAFFEDMAALGVERPEVLPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT +I +M+ LI+ +     AY+A +    F  +   +YG  S++  +  + G RV  ++
Sbjct: 115 ATENIEEMVALIERLAEKDIAYQAEDGSWYFRIARFADYGKLSKKDFEGIEDGARVDVDE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K    DF LWK   P E  WE+  G GRPGWHIECSAM++ +LG  FD+H GG DL F
Sbjct: 175 YEKDAARDFALWKAVKPGEHAWETRLGPGRPGWHIECSAMATKFLGDGFDLHAGGEDLTF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A      A  W+H  FL +EGRKMSKS GNF T+ +LL       +  
Sbjct: 235 PHHENEIAQSESASGT-AFARHWMHVRFLLVEGRKMSKSEGNFYTLRDLLL------KGH 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAVL--- 352
            A  IR  ++   YR  ++FT   L E+            +  + S  +G+ +       
Sbjct: 288 RASAIRFLLMSVPYRHQLNFTFDGLIESTNAVERLRTFADRMRKGSFPEGLNEDLAAATA 347

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-SAHILGI---------- 394
                  +AL NDLNT  A  A+  L R      D   + +  +A IL +          
Sbjct: 348 KALAGYDAALSNDLNTAEARAAIFDLVRAGNSAADAGTVKSGNAAEILKVLERFDGVFAV 407

Query: 395 ------EVCKEHLN----------------KNISIA---IEKLVQERLILLKMKKFSSAD 429
                 E+ +  L+                  +S +   I+ LV ER    K + F+ AD
Sbjct: 408 LVDRDAEITRAALDWAEKDGRMDEAAPELVATLSFSDADIDALVAERTHAKKTRNFARAD 467

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +R +L +KG +LED K+        RWK+K
Sbjct: 468 AVRNELLAKGILLEDTKDG------VRWKRK 492


>gi|33865235|ref|NP_896794.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|61216278|sp|Q7U8C0|SYC_SYNPX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33638919|emb|CAE07216.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 493

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 143/323 (44%), Positives = 191/323 (59%), Gaps = 21/323 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L +   E 
Sbjct: 3   LRLTNTLTRRTEPFTPLTPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRFLIWRGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKI++RA ++      N +++ ++ +N   F +D   L  L P   PR
Sbjct: 62  -VTFVQNFTDIDDKILKRAAEQ------NSSMTEVSERNIDAFHQDMDALGILRPDRMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP-- 180
           AT  +  +  LI  +   G AY A+ ++ F       YG  S R + EQ+     RV   
Sbjct: 115 ATQCLDGIRSLIGELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLSEQQDNAAGRVADA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EEARKQHPFDFALWKGAKPGEPSFPSPWGEGRPGWHIECSAMVRAELGDTIDIHLGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   E  A +W+HNG +N+ G+KMSKS GNF TI  LLE       
Sbjct: 235 VFPHHENEIAQSEAATGKE-LARVWMHNGMVNVGGQKMSKSLGNFTTIRALLE------- 286

Query: 301 SWPAPV-IRLAMLMTHYREPIDF 322
           S  +P+ +RL +L  HYR+P+DF
Sbjct: 287 SGVSPMTLRLFVLQAHYRKPLDF 309


>gi|254459132|ref|ZP_05072554.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084025|gb|EDZ61315.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 466

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 153/374 (40%), Positives = 208/374 (55%), Gaps = 31/374 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+++++   EF  +      +YVCGPTVYD +H+G+A+  +VFD+L R+L+    +  V
Sbjct: 3   IYDSVQKTKREFTPLVEGKASLYVCGPTVYDDSHLGHAKSALVFDLLSRVLKANGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY RNITDIDDKII++A +    I        IT   T  F K+   +    P  +P+AT
Sbjct: 61  TYARNITDIDDKIIKKAAESGKDIKE------ITDFYTDAFHKEMDAIGVSRPDIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             +  M  LIQ +I  GHAY+ +  +I FDTSS   Y S S R  DE     RV     K
Sbjct: 115 ESLDAMYELIQKLIDSGHAYKTSEGDIYFDTSSDGEYLSLSSRVQDEDDKLQRVENSLQK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL---GKVF--DIHGGGLDL 240
           +NPADF LWK        + SP+G GRPGWH+ECSAM   +L   G  F  DIHGGG DL
Sbjct: 175 RNPADFALWKSVKDNTITFNSPFGEGRPGWHLECSAMIEKHLAHEGAEFAVDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE AQ+ CA      AN W+HNGF+N++G KMSKS GN   + + L       +
Sbjct: 235 LFPHHENEAAQTRCATN-HALANYWMHNGFVNIDGEKMSKSLGNSFFLKDAL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIID--------PAV 351
            +   V+R  +L THYR   +F  Q L  ++  L K +       G+ D         ++
Sbjct: 287 EYDGEVLRFYLLSTHYRSNFNFNTQDLATSKKRLDKIYRLKKRLFGLADCTDATPFKESL 346

Query: 352 LSALYNDLNTVSAI 365
           L AL +D+N  SA+
Sbjct: 347 LKALSDDMNVSSAL 360


>gi|169627674|ref|YP_001701323.1| cysteinyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169239641|emb|CAM60669.1| Cysteinyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 479

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 165/476 (34%), Positives = 234/476 (49%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           +++Y+T    + +F  + P  + +Y+CG TV    HIG+ R  + FDVL R L  R Y  
Sbjct: 7   LRLYDTRVGAVRDFVPLQPGTVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLSARAY-- 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN+TDIDDKI+ +A       P  +      +   + F +    L  L P+  
Sbjct: 65  --DVLFVRNVTDIDDKILNKAADA--GRPWWE----WAATYERAFDEAYESLGVLPPSVS 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PRAT HI QMI LI  +I  GHAY    E   ++ FD  S P YG  S  KID+   G  
Sbjct: 117 PRATGHITQMIELIDRLIERGHAYRDLREGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEG 176

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF LWK + P EP W +PWG GRPGWH+ECSAM+  YLG  FDIH GG+
Sbjct: 177 VATG--KRDPRDFTLWKGAKPGEPSWPTPWGPGRPGWHLECSAMARTYLGPSFDIHCGGM 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQSC A   +  A  W+HNG++ + G KMSKS GN ++I  +L+  +  
Sbjct: 235 DLVFPHHENEIAQSCAAG--DGFARYWMHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKW--PQTSTSKGIIDP 349
                A  +R  +   HYR  ++++   L +A       E  L +          G   P
Sbjct: 291 -----AVELRYYLGSAHYRSMLEYSETALADAVKAYCGIEDFLHRVRIRVGDVPVGTWTP 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH 400
           A  +AL +DL+   A+  +H    +  +  D               A   ILG +   E 
Sbjct: 346 AFAAALDDDLSVPIALAEVHSTRADGNRALDAGDHEGALSAAASIRAMMSILGCDPLDER 405

Query: 401 LNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                        + + +   +Q R      K ++ AD IR +L+  G  + D  +
Sbjct: 406 WETRDETSAALNAVDVLVTAELQRRETARTEKNWALADEIRDRLKRAGLEITDTAD 461


>gi|224025545|ref|ZP_03643911.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
           18228]
 gi|224018781|gb|EEF76779.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
           18228]
          Length = 492

 Score =  263 bits (671), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 173/495 (34%), Positives = 261/495 (52%), Gaps = 59/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY   H+G+ARP I FD+LYR L + 
Sbjct: 1   MENKLIIYNTLTRRKELFVPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDILYRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHKA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIQLVEEILKNGYAYESKGSVYFDVAKYNKDHHYGVLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQ+  ++   +  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGETFDIHGGGMDLVFPHHECEIAQAVASEG-HQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
           IT++E    + K   +++    IR  +L  HYR  +DF+ + L  AE  L +        
Sbjct: 292 ITLDEFFTGSNKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGVKNL 351

Query: 338 ----PQTSTSKGIIDPAVL-----SALYNDLNTVSAIQALHKLAR--------ESTKNHD 380
               P  +TS   I+P  L      A+ +DLNT   I  L    R        ++T + +
Sbjct: 352 ERITPAKATSG--IEPQGLREKCYEAMNDDLNTPIVISHLFDATRMINTVIDKKATISAE 409

Query: 381 LLPIFNASAH-----ILGIEVCKEH---LNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
            L    +  H     +LG++   E+     +     ++ L+++R+     K ++++D IR
Sbjct: 410 DLEELKSVFHLFVFDLLGLKAEAENNAAREEAYGKVVDMLLEQRMQAKANKDWATSDKIR 469

Query: 433 KQLESKGFILEDYKN 447
             L + GF ++D K+
Sbjct: 470 DNLAALGFEVKDTKD 484


>gi|42525611|ref|NP_970709.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|61216253|sp|Q73RJ6|SYC_TREDE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|41815622|gb|AAS10590.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|325475275|gb|EGC78460.1| cysteinyl-tRNA synthetase [Treponema denticola F0402]
          Length = 492

 Score =  263 bits (671), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 177/510 (34%), Positives = 254/510 (49%), Gaps = 76/510 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL  K  EF  I      +Y CGPTVYD+AHIGN R  +  D+L + LR+   + 
Sbjct: 3   LKLHNTLGNKKEEFIPIHEGKAGVYGCGPTVYDYAHIGNLRTYVFQDILVKTLRFLGYD- 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT+V NITD+          +DK+++ A +   S+        I    T+ F  DT RL
Sbjct: 62  -VTHVMNITDVGHLTDDEDSGEDKMVKSAEERGKSVLE------IAEFYTKAFFNDTERL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P    +AT HI +MI LI+ I  +GH Y A   + +D S+ P YG  +   +++ K
Sbjct: 115 NIERPGIVCKATEHINEMIELIKRIEANGHTYMAGGNLYYDISTFPKYGELANINLEDLK 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G R+    +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+  
Sbjct: 175 AGARIEIDKNKRNPHDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGEQI 234

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D I  HH NEIAQS  A   +K  N W+HN FL +   KMSKS G+FI + ++
Sbjct: 235 DIHKGGIDHIRVHHTNEIAQSEGATG-KKWVNYWLHNEFLVMNKGKMSKSAGSFIILEDV 293

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSK 344
           +       + + A   R  +L  HYR  + F+ + +  A+         ++KW    +  
Sbjct: 294 I------NKGFSALDYRFLLLGGHYRSQLTFSWEAMETAKNGRKNLNNRVAKWLDGLSDS 347

Query: 345 GIIDPAVLS--------------------------ALYNDLNTVSAIQALHKLARE-STK 377
            I++ A L+                          A+ +DL+T  A+  L  L +E    
Sbjct: 348 EIMEYAALTENLNLKSAKDMIKNEKARSCFDNFIAAMEDDLSTPKALSELQLLIKEKDIP 407

Query: 378 NHDLLPIFNASAHILGIEVCKEHLN---KNISIAIE-----KLVQERLILLKMKKFSSAD 429
             D+L +  A   ILGI++ +E  N      SI I+     KL++ER      K +  AD
Sbjct: 408 QKDVLTVLAAMDSILGIKLIEESFNTLKDKGSIEIDESEILKLIEERASAKLDKNYKLAD 467

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR +L+  G ILED          T WK+
Sbjct: 468 EIRDKLKGMGIILEDQAGK------TTWKK 491


>gi|255325868|ref|ZP_05366960.1| cysteine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297080|gb|EET76405.1| cysteine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 462

 Score =  263 bits (671), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 173/476 (36%), Positives = 243/476 (51%), Gaps = 55/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           ++IY+T  R   +F  I P +  +Y+CG T     HIG+ R  + FD+L R LL   Y  
Sbjct: 4   LRIYDTATRSQRDFDPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGYD- 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  + P+ +P
Sbjct: 63  --VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVIPPSVEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT  + QM+  +Q +I  G AY A+  + FD ++       +YGS S  K++E + G  
Sbjct: 115 RATGFVTQMVDYMQRLIDAGFAYPADGSVYFDVAAWTKAEGSDYGSLSGNKVEEMEQGE- 173

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K+   DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIH GGL
Sbjct: 174 -GEDSAKRGAQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSNFDIHCGGL 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I  +LE  +  
Sbjct: 233 DLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMSGEKMSKSLGNVLSIPNMLELVR-- 288

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA---------------EILLSKWPQTST 342
                 PV +R  +   HYR  ++++   LTEA               ++ L +W Q   
Sbjct: 289 ------PVELRYYLGSAHYRSVLEYSETALTEAAAGYRRIEDFLGHFDDLELGEWTQGFA 342

Query: 343 SKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
                D AV  AL     TV A  +AL   A +  +   L     A AH+LG +  +   
Sbjct: 343 DAMNDDIAVPKALAEIHTTVRAGNKAL--AAGDEAEARTLAGQVRAMAHVLGFDPLEWED 400

Query: 402 NKNIS---IAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
               S    A++ LV    + R      K F++AD +R +L + G  + D   PD 
Sbjct: 401 GAQASGADAALDALVHAELERRTQARADKDFATADAVRDRLAAAGITITD--TPDG 454


>gi|189485695|ref|YP_001956636.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226735068|sp|B1GYT2|SYC_UNCTG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|170287654|dbj|BAG14175.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 465

 Score =  263 bits (671), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 174/474 (36%), Positives = 247/474 (52%), Gaps = 51/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           IKI+NTL  K  EF     + + MYVCG T YD  H+G+AR  +VFD++ R LLR  Y  
Sbjct: 3   IKIHNTLSNKKEEFYPQRGNFVSMYVCGITPYDEVHLGHARVYVVFDIVKRHLLRRGY-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +++N TD+DDKI++R++++      N   S +     + +     RL  L     P
Sbjct: 61  -IVKHIQNFTDVDDKIVKRSQEK------NMKPSELAQIYIEDYFVQAGRLNILKAEKYP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
             T  IP+++  I+ ++  G AYE   +I F      +YG  S+R + + + G RV    
Sbjct: 114 CVTQMIPEIVNFIKELVNKGLAYEIGGDIYFSVEKFKDYGKLSKRNLKDLRAGARVGVCN 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +  DF LWK++   EP    WESPWG+GRPGWHIECSAMSS  LG   DIHGGG DL
Sbjct: 174 GKNSAFDFALWKKTKENEPREVTWESPWGKGRPGWHIECSAMSSELLGDTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +K    WIHNGF+ +   KMSKS  NF T+  + E  K+  R
Sbjct: 234 IFPHHENEIAQS-EAKTGKKFVKYWIHNGFVTINKEKMSKSLNNFFTLKAIFE--KYNPR 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------TSKGI 346
                V+R  +L  HY  P+DF+   +  A   L     T               T K +
Sbjct: 291 -----VVRYYLLTQHYSSPLDFSDAGIESARNTLQGMDGTYLRLISSVKESDVEITDKDL 345

Query: 347 ID--PAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHI-LGI 394
            D     LSAL +D N+  A+  LH+L    +K            L  +F   A   LGI
Sbjct: 346 SDLQGNFLSALDDDFNSEKALSYLHELKGLISKGLLTAGRERLSQLKKLFEDFAGTSLGI 405

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ-LESKGFILEDYKN 447
            + +E   +N   +++ L++ER    K K ++ +D +RK  ++ +G+ + D K+
Sbjct: 406 LLPEE---QNADESLQNLLKERNDARKNKNWAESDRVRKLIIDERGYKIFDNKD 456


>gi|220930684|ref|YP_002507593.1| cysteinyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|220001012|gb|ACL77613.1| cysteinyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 461

 Score =  263 bits (671), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 165/471 (35%), Positives = 244/471 (51%), Gaps = 45/471 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ I+   +R+Y CGPTVY++AHIGN R  +  D+L R+L+Y     
Sbjct: 1   MKVFNTLSRQKEEFKPINDKEVRIYSCGPTVYNYAHIGNLRTYVFMDILRRVLQY--NGY 58

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            + +V NITD+          +DK+++ AR E    P       I    T  F+KD   L
Sbjct: 59  SLKHVMNITDVGHLVSDEDEGEDKMVKGAR-EQKKTPWE-----IAEYYTSVFMKDIRAL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P   P+AT HIP+M+  +  ++  G+ YE ++ I FD      YG  SR  +++Q 
Sbjct: 113 NIQVPEIVPKATEHIPEMLEFVHGLVDSGYGYETSDGIYFDIQKFEGYGKLSRANLEDQI 172

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP--GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            G RV     K++PADF LWK++ P E    W S WG G PGWHIECSAM   YLG  FD
Sbjct: 173 AGARVEVNEEKRHPADFALWKKA-PKEHIMQWPSEWGMGYPGWHIECSAMGRKYLGDTFD 231

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTA-NIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           IH GG+D I  HHENEIAQS     ++K+A N W+H  F+ +   KMSKS GN  TI+ L
Sbjct: 232 IHTGGVDHIPVHHENEIAQSEAL--LKKSAVNYWMHGEFMMVNNGKMSKSLGNTYTIDNL 289

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGII 347
            E      + +     R   L  HYR  ++FT   +  A++   ++ +   S    K  +
Sbjct: 290 KE------KGYDPMAFRYMCLNAHYRNKLNFTWDVMQSAQVSYDRFVEGVLSHKDGKEQV 343

Query: 348 DPAVL--------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           D AV+         ++ +DLN   A+       R   K+  +  +      I G  + K+
Sbjct: 344 DSAVVKEFLSDFEDSINDDLNIPKALGVAWNAIRYGKKSQAIYELLTKMNSIFGFILDKK 403

Query: 400 HLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             + +   IS  I +L++ER      K +  +D IR +L++ G+ +ED  N
Sbjct: 404 KESTSEPEISPEIHRLLEERQEARAGKNWKRSDEIRDELKTMGYAVEDTAN 454


>gi|33592950|ref|NP_880594.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|61216293|sp|Q7VX96|SYC_BORPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33572598|emb|CAE42190.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382362|gb|AEE67209.1| cysteinyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 486

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 157/414 (37%), Positives = 221/414 (53%), Gaps = 33/414 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+      +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 2   LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRA--SGL 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY A + ++ +      +YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE------LLET 294
            FPHHENEIAQ+  A      AN+W+H G L ++  KMSKS GNF TI +      L +T
Sbjct: 234 KFPHHENEIAQTEGA-FGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSDT 292

Query: 295 K-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIID- 348
           + ++      A ++R  ++  HYR P ++    L +A+  L +  Q    T+     +D 
Sbjct: 293 QAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVDW 352

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGI 394
                  A  +A+ +D N+  A+ AL +LA E+ +      +    A   +LG+
Sbjct: 353 SEEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAVGQLKALGAVLGL 406


>gi|297184120|gb|ADI20239.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 495

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 181/491 (36%), Positives = 246/491 (50%), Gaps = 65/491 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I N+L  +   F  +   N+ MYVCGPTVY   H+GNAR    FD+++R L++  G K
Sbjct: 10  LNIENSLTGEKEAFVPVHEGNVGMYVCGPTVYSDVHLGNARTFTSFDMIFRYLKHI-GYK 68

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD           +DKI ++AR E    P+      I  + T  F K    L
Sbjct: 69  -VRYVRNITDAGHLENDADAGEDKISKKARLEQVE-PME-----IVQRYTVDFHKVMDAL 121

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKI 170
               P+ +P AT HI + I ++Q I+  G AYE+N  + FD ++      +YG  S RK+
Sbjct: 122 NAFPPSIEPTATGHISEQIEMVQTILDKGWAYESNGSVYFDVTAYNANGGDYGILSGRKM 181

Query: 171 DEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           DE + GTR  + +  K+NPADF LWK+++P     W SPW  G PGWH+ECSAMS+ YLG
Sbjct: 182 DELQAGTRALDGQEEKRNPADFALWKKASPTHIMRWPSPWSIGFPGWHLECSAMSTKYLG 241

Query: 229 KVFDIHGGGLDLIFPHHENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           + FDIHGGG+DL FPHHE EIAQ S C+    K A  W+H   L L G++MSKS GN I 
Sbjct: 242 ETFDIHGGGMDLKFPHHECEIAQNSACSGH--KGARYWMHANMLTLNGKRMSKSTGNTIL 299

Query: 288 INELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTST 342
             EL         + +   V+R  M+  HY   +DF+   L  AE     LL    +  T
Sbjct: 300 PRELFAGDSPLLDKGFSPSVVRFFMMQAHYSSVLDFSNDALLAAEKGHDRLLGALEKLDT 359

Query: 343 ------SKGIIDPAV---LSALYNDLNT-------VSAIQALHKLARESTKNHDLLPIFN 386
                 S   + P +     A+ ++ NT         AI+ +         N   L  F 
Sbjct: 360 LVPSKESTIALQPWIDKCYQAMSDNFNTPILIAHLFEAIKWISTAEGNIGLNAGELETFK 419

Query: 387 ASAHILGIEVC-------------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           AS +    E+              KE L+K +S+ IE   Q RL     K + +AD IR 
Sbjct: 420 ASLNAFTFELLGLRTKSADSSNAYKEALDKAMSLVIELRAQARL----NKDWGTADIIRD 475

Query: 434 QLESKGFILED 444
           QL   G  L+D
Sbjct: 476 QLHDAGIQLKD 486


>gi|33600720|ref|NP_888280.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|61216294|sp|Q7W862|SYC_BORPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216296|sp|Q7WLL0|SYC_BORBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33568320|emb|CAE32232.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 485

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 215/395 (54%), Gaps = 30/395 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+      +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 2   LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRA--SGL 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY A + ++ +      +YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE------LLET 294
            FPHHENEIAQ+  A      AN+W+H G L ++  KMSKS GNF TI +      L +T
Sbjct: 234 KFPHHENEIAQTEGA-FGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSDT 292

Query: 295 K-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIID- 348
           + ++      A ++R  ++  HYR P ++    L +A+  L +  Q    T+     +D 
Sbjct: 293 QAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVDW 352

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKN 378
                 A  +A+ +D N+  A+ AL +LA E+ + 
Sbjct: 353 SEPQAQAFKAAMDDDFNSSGAVAALFELASEANRT 387


>gi|326773069|ref|ZP_08232353.1| cysteine--tRNA ligase [Actinomyces viscosus C505]
 gi|326637701|gb|EGE38603.1| cysteine--tRNA ligase [Actinomyces viscosus C505]
          Length = 530

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 167/513 (32%), Positives = 250/513 (48%), Gaps = 94/513 (18%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y++  R I        P  + +Y+CG TV    HIG+ R  I FDVL R L     E
Sbjct: 29  LRLYDSAARAIVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWL-----E 83

Query: 64  KC---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +C   V  +RN+TDIDDKI+ ++    P +P          +  ++F      L   APT
Sbjct: 84  RCGQEVRLIRNVTDIDDKILSKSAAAEPPVPW----WAWAQRFEREFDAAYRALGVDAPT 139

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIFDTSSIPNYGSFSRRKI-------D 171
           ++PRAT HIP+MI L+Q ++  GHAY  E+ N + +D  S+P YGS + +++       D
Sbjct: 140 YEPRATGHIPEMIDLVQRLLDAGHAYVGESGN-VYYDVRSLPGYGSLTNQRLEDLATTED 198

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLG 228
           E ++   V  +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG
Sbjct: 199 ESQLDDDV--EADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRPGWHLECSAMSRRYLG 256

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIHGGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + +
Sbjct: 257 ETFDIHGGGIDLRFPHHENEQAQSHGAGW--GFARHWVHNAWVTIKGEKMSKSLGNSLVV 314

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------- 337
            ELL       + + A V+RLA+   H+R  ++F+ + L +A  L  +            
Sbjct: 315 AELL-------KRYDAAVLRLALGTVHHRSTVEFSEETLADAAALWERLSGAILRAYEFC 367

Query: 338 ----------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALH-----------KLAREST 376
                     P        +     +A+  DLN   A+  +H           + A    
Sbjct: 368 DGGDANPVDAPAEQVRARALPAEFTAAMDEDLNLAGAMAVIHATLKALNVALTQAAPSGG 427

Query: 377 KNHD---------LLPIFNASAHILGIEVCKEHLNKNI---------SIAIEKL------ 412
           +  D         L     +   +LG++   E     +           A+E L      
Sbjct: 428 QGADDALRASVTGLALDLRSQLDVLGLDPLSEPWRTRVLDGAGSSQGGAAMEALDRLIRH 487

Query: 413 -VQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ++ER      K ++ AD +R +L   G ++ED
Sbjct: 488 DLEERAQARAAKDWARADALRDKLTGAGVVVED 520


>gi|154508503|ref|ZP_02044145.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798137|gb|EDN80557.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
           17982]
          Length = 485

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 149/394 (37%), Positives = 217/394 (55%), Gaps = 48/394 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y++   ++     + P  + +Y+CG TV    H+G+ R  + FD L R LR    E 
Sbjct: 2   LHLYDSKSARVQPLTPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+      H S            +  ++F +    L   +PT++PR
Sbjct: 61  -VTYVRNVTDIDDKIL------HKSAEAGWDWWAWAYRFEREFTQAYETLGVQSPTYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKM---GTRVP 180
           AT HIP+ + L+Q +I  GHAY + +  + FD  S P+YGS +R+++ + +      ++ 
Sbjct: 114 ATGHIPEQLDLVQRLIDAGHAYSDGHGNVYFDVHSQPDYGSLTRQRLADMRTTEDDAQID 173

Query: 181 E--KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           E  +  K++P DF LWK S P EP    W+SPWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 174 EVVEAGKRDPRDFALWKVSKPSEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIHG 233

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHENE AQS  A    + A +W+HN ++  +G KMSKS GN ++I  L E  
Sbjct: 234 GGIDLRFPHHENEQAQSHGAGW--EFARLWVHNAWVTTKGEKMSKSLGNVLSIGALTE-- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------- 342
                 +PA  +R A+   H+R  I++  + L  A    + W + ST             
Sbjct: 290 -----EYPAVAVRWALSTVHHRSAIEWGAETLPAA---YAAWEKFSTFVARAIEAAGEAP 341

Query: 343 -SKGIIDPAVL-----SALYNDLNTVSAIQALHK 370
            S+  + PA L     +A+ +DLN   A+  LH+
Sbjct: 342 ASEIALAPADLPEAFVAAMDDDLNVAGALAVLHE 375


>gi|187631656|sp|A2C808|SYC_PROM3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 499

 Score =  262 bits (670), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 182/506 (35%), Positives = 253/506 (50%), Gaps = 86/506 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL--YRLLRYYYG 62
           +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL  Y L R Y  
Sbjct: 3   LRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI++RA ++  S+        I+ +N + F +D   L  L P   
Sbjct: 61  --SVTFVQNFTDIDDKILKRAAEKKCSM------EHISEQNIEAFHQDMDALGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
           PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+     RV 
Sbjct: 113 PRATQCLDGIRALIGELETSGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 172

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DAEEARKQHSFDFALWKGAKTGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE     
Sbjct: 233 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLE----- 286

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA------------------EILLSKWPQ 339
             S  +P+ +RL +L  HYR+P+DFT   +  A                  E L   WP+
Sbjct: 287 --SGVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYAEAL--NWPE 342

Query: 340 TS-TSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLAR----------- 373
                + ++ PA               + AL +DLN+  AI  L  LAR           
Sbjct: 343 CKPLPQEVMQPAHSSTLEQCSEIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLER 402

Query: 374 ------ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLI 418
                 + T   +LLP   +    A++LG+E  K      E  N+     I+  +  R  
Sbjct: 403 GDTKAIQETAQLNLLPRWQLLVELANVLGLEAEKAAKLAPEGNNRVDENHIQLAIAARKE 462

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
               + F+ AD IR +L ++G  L D
Sbjct: 463 AKAARDFAKADRIRDELRAQGIELID 488


>gi|284161561|ref|YP_003400184.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011558|gb|ADB57511.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 474

 Score =  262 bits (670), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 176/494 (35%), Positives = 249/494 (50%), Gaps = 65/494 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +++ E +      +RMYVCG T YD++HIG+AR  + FDVL R L Y   E 
Sbjct: 6   VRLYNTLTKEMEELKL--DKTVRMYVCGITAYDYSHIGHARTFVFFDVLRRYLEYEGHE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKI+ RA  E            I  K   +F+KD + L    P + P+
Sbjct: 63  -VIYVQNFTDVDDKIVRRAVNE------GKTQKEIAEKFISEFLKDMSALNVKMPDYMPK 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            T+HI  ++  +Q +I  G+AYE  NE    + F   +  +YG  S   ++E     R+ 
Sbjct: 116 VTDHIQDIVQAVQKLIELGYAYEVENEHGKDVYFHVPAFESYGKLSGMSLEELNR-HRIE 174

Query: 181 EKYHKKNPADFILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               K++  DF LWK +       +  ++SPWG GRPGWHIECS MS+ YLG  FDIHGG
Sbjct: 175 PNPKKRDVKDFALWKSAKEDDFKAKAVFDSPWGYGRPGWHIECSVMSAKYLGVPFDIHGG 234

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENE AQS     +E     WIH  F+ ++G KMSKS GN + I ++L    
Sbjct: 235 GKDLIFPHHENERAQSYALFGVE-PVRYWIHCDFVMIKGEKMSKSLGNIVKIRDVLNV-- 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----------------EI-LLSKWPQ 339
           +GG      V+R  +L   YR P+D++ + L  A                EI  L  + +
Sbjct: 292 YGGE-----VLRYFLLTAFYRSPLDYSEKSLERAKNSYNYLKNTLINLDMEISALKSYGE 346

Query: 340 TSTSKGIIDPAV----LSALYNDLNTVSAIQALHKLARESTKN-HDL--------LPIFN 386
                G  DP+       +  + +NT  A+   H  A+   KN +D+           F 
Sbjct: 347 DRKDMG-FDPSSFLKEFESAMDIMNTPKALAVFHSFAKAINKNLYDMSLKELESCFETFM 405

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             + +LG+    E +       IE LV+ER +  K K F  AD IR++L  KG +L D  
Sbjct: 406 TFSKVLGLFENYERIPTLPKELIE-LVKEREVARKEKDFERADKIREKLREKGIMLID-- 462

Query: 447 NPDNGQRMTRWKQK 460
                 + TRW  K
Sbjct: 463 ----TPKGTRWLTK 472


>gi|327403405|ref|YP_004344243.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318913|gb|AEA43405.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 517

 Score =  262 bits (670), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 173/491 (35%), Positives = 252/491 (51%), Gaps = 55/491 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + IYN+L  +   F+ I    + MYVCGPT+Y   H+GN R  I FD++YR L +  
Sbjct: 30  KHPLLIYNSLSGEKEVFKPIIAGKVGMYVCGPTLYSEPHMGNMRTFINFDLIYRYLLHLG 89

Query: 62  GEKCVTYVRNITDID----------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            +  V YVRNITD            D I + AR E        ++ I+   N +   +D 
Sbjct: 90  LQ--VKYVRNITDAGHITNSAGEAVDSIGKAARVEQVQ-----SLEIVYKYNVK--FQDL 140

Query: 112 TRL-ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
            R+   L P+ +P AT HI + I +I+ II +G AY  N  + FD  +      YG  S 
Sbjct: 141 QRIYNLLPPSIEPTATGHIQEQIEVIEKIIENGFAYVVNGSVYFDVRAYGEKFEYGILSG 200

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPMEPG-WESPWGRGRPGWHIECSAMSSH 225
           RK+DE    TR +  +  K+  ADF LWK+S P +   W SPWG G PGWHIEC+AMS+ 
Sbjct: 201 RKVDELAEETRELNAQEEKRFFADFALWKKSNPDDMQIWRSPWGDGNPGWHIECTAMSTK 260

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGGLDL FPHHE+EIAQSC +  +   AN W+H   LN+ G+KMSKS GN+
Sbjct: 261 YLGDQFDIHGGGLDLKFPHHEDEIAQSCGSAGV-SPANYWMHANMLNVNGQKMSKSLGNY 319

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
               E+++ T     + +   VIR  M+  HYR  +DFT   L  AE   ++  +     
Sbjct: 320 FLPKEIVDGTTDVFDKPYSPQVIRFCMMQAHYRSTLDFTPDSLNAAEKGFTRLSEAYEKL 379

Query: 345 GIID---------PAVLSALY----NDLNTVSAIQALHKLAR--------ESTKNHDLLP 383
           G ++         PA++ + Y    +D N    + +L +  +        ++T + D L 
Sbjct: 380 GSLEVKETSSQDVPALVDSFYKAMNDDFNAPMLVASLFEAVKFINTVSEGKATISADDLE 439

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK-------FSSADYIRKQLE 436
           I          +V    + K+ + A E L     ++L M+K       +S++D IR +L 
Sbjct: 440 ILTKEFTGFVFDVLGLSIEKSTAGANEALTATMDLVLDMRKSARENKDWSTSDKIRDRLA 499

Query: 437 SKGFILEDYKN 447
             G +++D K+
Sbjct: 500 EAGIVVKDGKD 510


>gi|313206920|ref|YP_004046097.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446236|gb|ADQ82591.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023996|gb|EFT36998.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335643|gb|ADZ11917.1| Cysteinyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 486

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 179/487 (36%), Positives = 249/487 (51%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  +   F+ I   N+ MYVCGPTVY   H+GN R  + FD +YR L Y  G K
Sbjct: 2   LKIYNSLTGEKEVFKPILDRNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRTLTYL-GYK 60

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD           +D+ ++++R E    P+      I  K T  F K     
Sbjct: 61  -VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKVLELF 113

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKI 170
             L PT +P A  HI + I L Q +I  G AYE+N  + FD  +      NYG  S+R I
Sbjct: 114 NLLPPTIEPTAIGHIMEQIELTQKLIDKGFAYESNGSVYFDVKAYNEKGLNYGELSKRNI 173

Query: 171 DEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           +E    TR +  +  KKNP DF LWK+++P     W SPWG G PGWH+EC+AMS+ YLG
Sbjct: 174 EELFANTRDLDGQGEKKNPQDFALWKKASPAHIMRWNSPWGEGFPGWHLECTAMSTKYLG 233

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIHGGG+DL FPHHE EIAQ    +      N W+H   L + G++MSKS GN+I  
Sbjct: 234 EKFDIHGGGMDLKFPHHECEIAQGKACNGT-SPVNYWMHANMLTMNGQRMSKSTGNYILP 292

Query: 289 NELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA----EIL 333
            +L+  +  F  + +   V+R   +  HYR  +D +           QRL EA    E+L
Sbjct: 293 MQLISGENDFFEKPFHPSVVRFCFMQAHYRSVLDISNEAMIASEKGFQRLMEAMNVLELL 352

Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLN----------TVSAIQALHKLARESTKNHDLL- 382
            +    T+ +         +AL +D N           V  I AL K  +ES    DL+ 
Sbjct: 353 SANGNNTTFNIEDWKSKCHTALLDDFNAPILIAHLFEAVKFIFAL-KDGKESISETDLIL 411

Query: 383 ---PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
               +      +LG++  +E+ N+ +  A++ L+  R    K K +  +D IR QL  KG
Sbjct: 412 LKETLNRLVFDVLGLQKIEENNNEKLDQALQILINLRNEARKAKNWELSDQIRDQLLEKG 471

Query: 440 FILEDYK 446
             L+D K
Sbjct: 472 IELKDGK 478


>gi|268679683|ref|YP_003304114.1| cysteinyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617714|gb|ACZ12079.1| cysteinyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 466

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 165/479 (34%), Positives = 250/479 (52%), Gaps = 46/479 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY++++++   F  I+ + +++YVCGPTVYD AH+G+AR  I FD+L R+L     +  V
Sbjct: 3   IYDSVQKQKVNFIPIEENKVKLYVCGPTVYDDAHLGHARSAIAFDLLRRVLIALGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+V+N TDIDDKII++  +   S+       +IT+   +++  +   L       +P+AT
Sbjct: 61  TFVKNFTDIDDKIIKKMHESGKSL------EVITTYYIERYKAEMHALHVNDADIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             I ++I  I +++    AY  ++ I FDTS    Y S S R ++E+    RV +K  KK
Sbjct: 115 ETIGEIIAFIDSMLQQKVAYATSDGIYFDTSKDSKYLSLSHRFVEEEASQARVEQKEEKK 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGLDLIF 242
           +  DF LWK S   EP + +P+G GRPGWHIECSAM   +L        DIH GG DL+F
Sbjct: 175 DQKDFALWKFSKENEPSYPAPFGIGRPGWHIECSAMIEKHLASDGDFQIDIHAGGADLLF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQ+ C    E  A  W+HNGF+ + G KMSKS GN   + + L         +
Sbjct: 235 PHHENEAAQTRCKSHQE-LAKYWMHNGFVTISGEKMSKSLGNSFFLKDALAI-------Y 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
              V+R  +L THYR   +F  + L   +  L K  +          S +       +L 
Sbjct: 287 SGEVLRFYLLATHYRANFNFAEEDLLNTKKRLDKLYRLKKRVFETTPSEASSSFKETMLE 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-----------LGIEVCKEH-- 400
           AL +DLN   A+ +L ++   + +  D  P   A   I           LGI +   +  
Sbjct: 347 ALSDDLNISKALASLDEMLSYANEMLDANPKDKAFKAITCANLQWIEALLGIGLYNPYHY 406

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
               +++   IAIE+L+ +R    K K F++AD IR +LE+K   L D  N    ++++
Sbjct: 407 FQMGVSEEEKIAIERLLNQRAEAKKAKDFATADEIRHKLEAKQIQLMDTVNGTQWEKVS 465


>gi|78777410|ref|YP_393725.1| cysteinyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|109894960|sp|Q30R91|SYC_SULDN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78497950|gb|ABB44490.1| cysteinyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 466

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 164/470 (34%), Positives = 243/470 (51%), Gaps = 48/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I+++ ++   EF   +   + +YVCGPTVYD AH+G+A+  +VFD+L R+L     E  V
Sbjct: 3   IFDSAKKIKREFIPQEQGKVSLYVCGPTVYDDAHLGHAKSALVFDLLCRVLNANGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY RNITDIDDKII RA+++      N  I  +T   T  + K+   L    P  +P+AT
Sbjct: 61  TYARNITDIDDKIINRAQEQ------NKTIKEVTDFYTDAYHKEMALLGISRPDIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             +  M  L+Q ++ + HAY  ++ ++ FDTSS   Y + S R  DE +   RV     K
Sbjct: 115 ESLDAMYALVQKLLDNKHAYTTDDGDVYFDTSSDSKYLTLSNRVQDESEKLQRVQSSSQK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGGLDL 240
           +NPADF LWK        + SP+G+GRPGWH+ECSAM   +L K       DIHGGG DL
Sbjct: 175 RNPADFALWKSIHDESVTFGSPFGKGRPGWHLECSAMIEKHLSKPNAKFAVDIHGGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE AQ+ CA      A  W+HNGF+N++G KMSKS GN   + + L       +
Sbjct: 235 LFPHHENEAAQTRCATD-HALAAYWMHNGFVNIDGEKMSKSLGNSFFLKDAL-------K 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAV 351
            +   V+R  +L THYR   +F  + L  A+  L K  +             K      +
Sbjct: 287 IYDGEVLRFYLLSTHYRSNFNFNEEDLATAKKRLDKIYRLKKRLFGVTYEDEKTDFKKEL 346

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHILGI------ 394
           L  L +DLN  +++  + ++   + +  D            L   +    ILG       
Sbjct: 347 LETLSDDLNISASLALIEEMITRANETLDTAGKHKELKREALSNLSFIEKILGFGIKNPY 406

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           E  +  +N+     I KL+++R    K K F+++D +R ++ + G  L D
Sbjct: 407 EYFQFGVNEETKTEIAKLIEKRAEAKKSKDFAASDMLRDKILAYGVNLMD 456


>gi|78213484|ref|YP_382263.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|109894956|sp|Q3AI74|SYC_SYNSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78197943|gb|ABB35708.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 493

 Score =  262 bits (669), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 143/325 (44%), Positives = 189/325 (58%), Gaps = 25/325 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           ++  N+L  +   F+ +      +Y CG TVYD  H+G+AR  I +DVL R L  R Y  
Sbjct: 3   LRFTNSLTSRTEAFEPLTEGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGYD- 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY++N TDIDDKI+ RA +E  ++        ++ +N + F  D  RL  L     
Sbjct: 62  ---VTYIQNYTDIDDKILNRANEEGITM------QAVSERNIEAFEVDMGRLNILPADRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
           PRAT  I  +  LI  +   G AY ++ ++ FD S   NYG  S R  D+Q+ G    T 
Sbjct: 113 PRATGCIEGIQTLISELESKGAAYSSDGDVYFDISKAKNYGKLSGRDPDDQQQGASGRTA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   EP WESPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DGEESRKRHPFDFALWKGAKAGEPSWESPWGPGRPGWHIECSAMVRQELGQTIDIHLGGG 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+     A +W+HNG +N+ G KMSKS GNF TI  LL+     
Sbjct: 233 DLVFPHHENEIAQSETANGT-TLAKLWMHNGMVNVGGTKMSKSLGNFTTIRALLD----- 286

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDF 322
             S  +P+ +RL +L  HYR+P+DF
Sbjct: 287 --SGISPMTLRLFVLQAHYRKPLDF 309


>gi|22299370|ref|NP_682617.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22295553|dbj|BAC09379.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 463

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 238/471 (50%), Gaps = 69/471 (14%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           + +Y CG TVYD+ H+G+AR  + +DVL R L +      V YV+N TDIDDKI+ RA +
Sbjct: 1   MTIYACGVTVYDYCHLGHARSYVAWDVLRRYLTFL--GYTVHYVQNFTDIDDKILRRAYE 58

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                   + ++ ++ +    + +D   L  L  +  PRAT  IP++I LIQ ++  G+A
Sbjct: 59  N------GETMATVSDRYIAAYHQDMAALNILPASAYPRATEVIPEIINLIQGLLDRGYA 112

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVPEKYHKKNPADFILWKRSTPME 201
           Y A  ++ +  +  P+YG  S R++++   G        E+  K++P DF LWK + P E
Sbjct: 113 YVAGGDVYYAVAQFPSYGKLSGRQLEQLMAGASGRIEEEEEQRKRHPLDFALWKAAKPEE 172

Query: 202 PG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
                 WE+PWG+GRPGWHIECSAM     G   DIH GG+DLIFPHHENEIAQS    +
Sbjct: 173 MSVYHPWEAPWGKGRPGWHIECSAMVRQAFGATVDIHCGGMDLIFPHHENEIAQSEAVTQ 232

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            +  A  W+HNGF+ +   KMSKS GNF TI +LL       +      +RL +L   YR
Sbjct: 233 -QPLARFWLHNGFVTVNTEKMSKSLGNFTTIRDLL------AQGLDPMALRLLVLQAQYR 285

Query: 318 EPIDFTVQRLTEA---------------EILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           +P+DFT + LT A               +I L               A   A+  DLNT 
Sbjct: 286 KPLDFTPEALTAAAKGWQTLGEALHLHQQIPLPPIDAAEVRSHPKTEAFCQAMDEDLNTA 345

Query: 363 SAIQALHKLARESTKN---------------------HDLLPIFNASAHILGIEVCKEHL 401
           +A+  + +LA+   +                      H L+ +    A +LG+E  KE  
Sbjct: 346 AALAVIFELAKTLNREQHRYLHGGGWGRSPAEVSRDWHTLVTL----AQVLGLE-AKEES 400

Query: 402 NKNISI-----AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           N  +++      I+ L+  R    + K ++ +D +R  L ++G  L D K+
Sbjct: 401 NPALTVELTDEEIQALIAARTAARQAKNYTESDRLRDLLLAQGVKLVDQKD 451


>gi|222834518|gb|EEE72995.1| predicted protein [Populus trichocarpa]
          Length = 241

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 128/249 (51%), Positives = 157/249 (63%), Gaps = 8/249 (3%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +YN+L RK    +   P  + MYVCGPTVY+FAHIGNARP +VFDVL RLLR  
Sbjct: 1   MTSALSLYNSLTRKKEPLRTGQPGRVTMYVCGPTVYNFAHIGNARPAVVFDVLARLLREQ 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y E  V Y RN TD+DDKI   A  E   +PI      IT++    + +D   L  L P 
Sbjct: 61  YAE--VVYARNFTDVDDKINASAAAE--GVPIG----TITARYIDAYHEDMRALGVLIPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP +I LIQ +I +G+AY   + ++F   S P YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPAIIALIQRLIANGNAYVEQDHVLFHVPSFPAYGQLSGRRPEDMLAGVRVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW SPWGRGRPGWHIECSAM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTAEVPGWPSPWGRGRPGWHIECSAMIGQHLGSTIDIHGGGQDL 232

Query: 241 IFPHHENEI 249
           IFPHHENEI
Sbjct: 233 IFPHHENEI 241


>gi|313680064|ref|YP_004057803.1| cysteinyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152779|gb|ADR36630.1| cysteinyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 482

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 178/503 (35%), Positives = 255/503 (50%), Gaps = 74/503 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+T++RK  EF    P ++ +YVCGPTVY  AH+G+ R  +V+DVL R L  + G + V
Sbjct: 5   LYDTMQRKKVEFVPATPGHVGIYVCGPTVYSDAHLGHGRAAVVYDVLRRWL-MHEGYR-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +V N+TD+          +DKI +RA+ E    P+      +  K   ++ +DT  L  
Sbjct: 63  RFVSNVTDVGHLTDDADEGEDKIAKRAKLEKLE-PME-----VADKYFWRYFEDTDALNV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P+  PRA+ HI + I L + ++  G+AYE N  + F  +  P+YG  S R++++Q+ G
Sbjct: 117 AKPSITPRASGHIIEQIELTKELLERGYAYEVNGSVYFRAAKWPDYGKLSGRRLEDQQAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            RV  +  K++P D+ LWKR+   EPG    W SPWG G PGWHIECSAMS  YLG+ FD
Sbjct: 177 ARVEVRGEKEDPRDWALWKRA---EPGHLMRWPSPWGEGYPGWHIECSAMSLKYLGEGFD 233

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHHE EIAQ+  A      A  W+H+  + L G KM+KS GNFIT+ ELL
Sbjct: 234 IHAGGIDLQFPHHECEIAQAEAAG--HAFARYWMHHNHVLLNGEKMAKSTGNFITLRELL 291

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSKGIID 348
           E  +         V+RL +L +HYR  +D T   L  A      LL  +    +  G   
Sbjct: 292 EKHE-------PMVVRLYLLQSHYRSVLDLTDAGLEAAGRAYYRLLEAYRSLRSGLGRAR 344

Query: 349 PAVLSALY---------------NDLNTVSAIQALHKLARESTK-----------NHDLL 382
              L+AL                +DL T  A+ AL     E  K              L 
Sbjct: 345 EGTLTALEEAIDRLEGSFAEAMNDDLGTPEALAALFSFLPELNKALAAAQGRASLERALG 404

Query: 383 PIFNASAHILGI---EVCKEHL-NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            +      +LG+    V +  L    +   IE L+++R      + F +AD IR +L   
Sbjct: 405 TLERLGEGVLGLFPPRVLEARLEGPLLEGLIELLLEQREAARSRRDFPAADAIRARLGEL 464

Query: 439 GFILEDYKNPDNGQRMTRWKQKP 461
           G ++ED   P      T+W+  P
Sbjct: 465 GVVVED--TPHG----TKWRLAP 481


>gi|227834035|ref|YP_002835742.1| Cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227455051|gb|ACP33804.1| Cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 473

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 163/481 (33%), Positives = 246/481 (51%), Gaps = 63/481 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R   EF+ + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 4   LRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A + +   P  + +S       ++F K    L  L P+ +PR
Sbjct: 63  -VALVRNVTDIDDKILTKAAENNR--PWWEWVSTYE----REFTKAYNTLGVLPPSVEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----------EIIFDTSSI-----PNYGSFSRRK 169
           AT  + QM+  +Q +I  G AY   N           + FD ++       +YGS S  +
Sbjct: 116 ATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSVYFDVAAWNATEGSDYGSLSGNR 175

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           ++E + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG 
Sbjct: 176 VEEMEQGE--TDNAGKRSPQDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGG 233

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I 
Sbjct: 234 EFDIHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSIA 291

Query: 290 ELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTS 341
            +LE  +        PV +R  +   HYR  ++++   LTEA       E  + K+   +
Sbjct: 292 NMLEIVR--------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVGKF--EN 341

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHD----LLPIFNASAHIL 392
             KG   PA   A+ +D+    A+  +H   R   K     N +    L     A A +L
Sbjct: 342 VEKGEWTPAFEEAMNDDIAVPKALAEIHTTVRAGNKALSEGNREEAKRLAGAVRAMAAVL 401

Query: 393 GIEVCKEHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           G +   E    +         + + +   ++ R      K +++AD +R +L + G  + 
Sbjct: 402 GFDPLDEQWKDSGEESGAEAALDVLVRAELERRTTARAEKDWATADAVRDRLAAAGITIT 461

Query: 444 D 444
           D
Sbjct: 462 D 462


>gi|32490992|ref|NP_871246.1| hypothetical protein WGLp243 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173143|sp|Q8D2V9|SYC_WIGBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|25166198|dbj|BAC24389.1| cysS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 463

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 157/468 (33%), Positives = 258/468 (55%), Gaps = 44/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL+ K  +F+ I+ + + +YVCG T YD  HIG+AR ++ FD++ +  +Y  G +
Sbjct: 2   MKIFNTLKNKKEKFKPINSNIVNVYVCGITPYDLCHIGHARTLVFFDIMIKYFQYK-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              Y+RNITDIDDKII +A  +       +  ++++    ++   D   L  + P ++PR
Sbjct: 61  -TNYIRNITDIDDKIINKAFHK------KEKYNLLSDFMIKEMKYDLNSLNIMPPNNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKM--GTRVPE 181
            TNHI  ++ +I+ ++   HAY     +++FD S+  +YG  S+R  +++++    +   
Sbjct: 114 VTNHISDILEMIKILLEKKHAYISKTGDVVFDISTYRDYGKLSKRFEEKKQLLNNKKNKI 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            +  K   DF+LWK S P EP W+SPWG GRPGWHIECSA+S   LG +FDIHGGG DLI
Sbjct: 174 NFKTKKEKDFVLWKMSKPNEPSWKSPWGHGRPGWHIECSAISDKTLGNIFDIHGGGSDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA+  +   N W+H G +  +  KMSKS GN   I E++       + 
Sbjct: 234 FPHHENEIAQSKCANS-KFNVNFWVHTGMVMFKKEKMSKSLGNSCLIREIV-------KK 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVL 352
           + A  ++  +  +HYR  I ++V  + +++  + +  ++  +         K       +
Sbjct: 286 YDADTLKYFLTSSHYRSQITYSVDNMEKSKSAVKRLYRSLHNTNYFYNLPIKEKFTSKFI 345

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI--EVCKEHLN 402
            A+ +D NT  A   L  ++R+          K + L  +    ++I+GI  E    +LN
Sbjct: 346 DAMNDDFNTPKAYSVLFSISRQINYFKNKNPEKANQLSTVLKNLSNIIGILNENPDSYLN 405

Query: 403 KNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +  +      I+ ++++R    K+K++  AD  RK+L+  G  LED
Sbjct: 406 NKLKFSKDKINKIKSIIKKRENYRKLKQWEKADEERKKLKYIGVCLED 453


>gi|33596886|ref|NP_884529.1| cysteinyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33573587|emb|CAE37581.1| cysteinyl-tRNA synthetase [Bordetella parapertussis]
          Length = 551

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 215/395 (54%), Gaps = 30/395 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+      +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 68  LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRA--SGL 125

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 126 AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 179

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY A + ++ +      +YG  S + +D+ + G RV    
Sbjct: 180 ATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVGS 239

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 240 AKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDL 299

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE------LLET 294
            FPHHENEIAQ+  A      AN+W+H G L ++  KMSKS GNF TI +      L +T
Sbjct: 300 KFPHHENEIAQTEGA-FGGALANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSDT 358

Query: 295 K-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIID- 348
           + ++      A ++R  ++  HYR P ++    L +A+  L +  Q    T+     +D 
Sbjct: 359 QAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVDW 418

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKN 378
                 A  +A+ +D N+  A+ AL +LA E+ + 
Sbjct: 419 SEPQAQAFKAAMDDDFNSSGAVAALFELASEANRT 453


>gi|124022576|ref|YP_001016883.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123962862|gb|ABM77618.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 511

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 182/506 (35%), Positives = 253/506 (50%), Gaps = 86/506 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL--YRLLRYYYG 62
           +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL  Y L R Y  
Sbjct: 15  LRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY-- 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI++RA ++  S+        I+ +N + F +D   L  L P   
Sbjct: 73  --SVTFVQNFTDIDDKILKRAAEKKCSM------EHISEQNIEAFHQDMDALGILRPDRM 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
           PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+     RV 
Sbjct: 125 PRATQCLDGIRALIGELETSGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 184

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 185 DAEEARKQHSFDFALWKGAKTGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 244

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE     
Sbjct: 245 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLE----- 298

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA------------------EILLSKWPQ 339
             S  +P+ +RL +L  HYR+P+DFT   +  A                  E L   WP+
Sbjct: 299 --SGVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYAEAL--NWPE 354

Query: 340 TS-TSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLAR----------- 373
                + ++ PA               + AL +DLN+  AI  L  LAR           
Sbjct: 355 CKPLPQEVMQPAHSSTLEQCSEIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLER 414

Query: 374 ------ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLI 418
                 + T   +LLP   +    A++LG+E  K      E  N+     I+  +  R  
Sbjct: 415 GDTKAIQETAQLNLLPRWQLLVELANVLGLEAEKAAKLAPEGNNRVDENHIQLAIAARKE 474

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
               + F+ AD IR +L ++G  L D
Sbjct: 475 AKAARDFAKADRIRDELRAQGIELID 500


>gi|309812587|ref|ZP_07706332.1| cysteine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308433438|gb|EFP57325.1| cysteine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 483

 Score =  262 bits (669), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 165/494 (33%), Positives = 246/494 (49%), Gaps = 65/494 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R++ +F+ ++P  + +Y+CG T     HIG+ R  + FDVL   L   +G  
Sbjct: 3   LQIFDTATRELRDFEPVEPGKVGIYICGLTTQGSPHIGHLRFAVAFDVLRNWLTRGHGYD 62

Query: 65  CVTYVRNITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT VRN+TDIDDKI+ + A    P      A S +  + T   +     L    PT++P
Sbjct: 63  -VTLVRNVTDIDDKILRKSAEAGEPWF----AWSYLHERETSDALD---ILGVQRPTYEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           RAT H+  M+ L++ +I  GHAY   + + ++ FD  S   YG+ +R+K+D+ +      
Sbjct: 115 RATGHVTDMVELMELLIERGHAYPAADGSGDVYFDVKSFDEYGALTRQKLDDMEDAADAD 174

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            +  K++P DF LWK     EP    W +PWG GRPGWH+ECSAM+  +LG  FDIHGGG
Sbjct: 175 PR-AKRDPRDFALWKGRKADEPASANWPTPWGEGRPGWHLECSAMARRWLGDTFDIHGGG 233

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHHENE AQS  A      A  W+HNG++ L G KMSKS GN +++ EL +T + 
Sbjct: 234 IDLRFPHHENEQAQSRAAGL--GFARYWMHNGWVTLSGEKMSKSLGNTLSVTELTKTVR- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGII 347
                   V+R  +   HYR  I++T   L EA   + +               TS  + 
Sbjct: 291 ------PLVLRYYLGSVHYRSTIEYTSDSLAEANAAVERIEGFLRRALGEDAVLTSADLA 344

Query: 348 D----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGI 394
           D     A ++ + +DLN   A+ A     RE     D   +           A   +LG+
Sbjct: 345 DVELPEAFVATMDDDLNVSGALAACFDAIREGNTAIDEADVRRVEELALQVAAMTDVLGV 404

Query: 395 -----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                          +   + +   ++ LV++R      K F++AD IR QL   G ++E
Sbjct: 405 NPLDPKWSGNGSADGDETKRALGALVDALVEQRKTARAAKDFATADIIRDQLADAGVVVE 464

Query: 444 DYKNPDNGQRMTRW 457
           D   PD      RW
Sbjct: 465 D--TPDG----ARW 472


>gi|94985814|ref|YP_605178.1| cysteinyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123381854|sp|Q1IXM5|SYC_DEIGD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94556095|gb|ABF46009.1| cysteinyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 497

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 181/498 (36%), Positives = 251/498 (50%), Gaps = 81/498 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +Y+T++R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R L  ++G +
Sbjct: 20  IVLYDTMQRQKVPFVPSVPGRVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRTL-LHFGYQ 78

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YV N+TD+          +DKI  RA  E    P+      +  K    FV+D   L
Sbjct: 79  -VRYVTNVTDVGHLQDDSDDGEDKIARRAALERLE-PME-----VADKYFWSFVEDMEAL 131

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P+  PRAT HIP+ I LI+ +I  GHAY ++  + FD  S P YG  S R++DE +
Sbjct: 132 NVLKPSINPRATGHIPEQIALIEELIERGHAYVSDGSVYFDVRSWPEYGKLSGRRLDELE 191

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKV 230
            GTR   +  K++P DF LWKR+   EPG    W SPWG G PGWHIECSAMS  YLG+ 
Sbjct: 192 EGTREAVREEKRDPRDFALWKRA---EPGHLMRWASPWGEGFPGWHIECSAMSLKYLGEG 248

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDL FPHHE EIAQ+  A      A  W+HN  + + G KMSKS GNF T+  
Sbjct: 249 FDIHGGGLDLEFPHHEAEIAQAEAAG--HPFARYWLHNNMVTVGGEKMSKSKGNFTTLKA 306

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA----EILLSK 336
           L              VIR  ++ +HYR   +F+           +RLTEA    E  L  
Sbjct: 307 LFAQHD-------PMVIRFLLVSSHYRSITEFSDAAFESARSGYRRLTEALHEIERRLPA 359

Query: 337 WPQTSTSKGIIDPAVL-----------SALYNDLNTVSAIQALHKLARE--------STK 377
            P         DPA+L            A+ +D NT  A+ AL  L  +           
Sbjct: 360 APDQD------DPALLEKIAGHIRTFEDAMRDDFNTPRAVAALFGLTTDVNAALNAGEVG 413

Query: 378 NHDLLPIFNA----SAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
              L    +A       +LG+       +E  ++ ++  +E ++Q R      K+++ AD
Sbjct: 414 RQALTAARDAYRTLGGGVLGLFAEGRTEREDDSQIVNALMELVLQARQHYRLQKQYAQAD 473

Query: 430 YIRKQLESKGFILEDYKN 447
            +R  L + G  +ED + 
Sbjct: 474 ELRNTLAAVGVTVEDTRE 491


>gi|295135612|ref|YP_003586288.1| cysteinyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983627|gb|ADF54092.1| cysteinyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 494

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 173/493 (35%), Positives = 263/493 (53%), Gaps = 58/493 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++KIYN++  +   F+ I+ S + MYVCGPTVY   H+GN R  I FD+++R L++  
Sbjct: 6   EQQLKIYNSISGEKEVFKPINDSYVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHL- 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD           +D+I ++AR E    P+      +  K T  F    
Sbjct: 65  GYK-VRYVRNITDAGHLENDAETGEDRIAKKARLEQIE-PME-----VVQKYTVDFHNIL 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
            +   L P+ +P AT HI + I +I+ II  G AYEAN  + FD    +   +YG  S R
Sbjct: 118 EKFNNLPPSIEPTATGHIVEQIEIIKTIIDRGFAYEANGSVYFDVLKYNEEKHYGKLSGR 177

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            I++    TR +  +  K+NP DF LWK++ P     W SPW  G PGWH+EC+ MS+ Y
Sbjct: 178 AIEDMIANTRELAAQSDKRNPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DL FPHHE EIAQ   A   +   + W+H   L L G+KM+KS GN I
Sbjct: 238 LGEEFDIHGGGMDLKFPHHECEIAQGEAATG-KDPVHYWMHANMLTLNGKKMAKSTGNNI 296

Query: 287 TINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------------- 331
              EL   K +  G+++   V R  ML  HYR  +DF+ + L+ +E              
Sbjct: 297 LPEELFSGKNEVIGKAFSPNVARFFMLQAHYRSILDFSKEALSASEKGFNRLIEAYASID 356

Query: 332 ---------ILLSKWPQT---STSKGIIDPAVLSALYNDLNTVSAI--QALHKLARESTK 377
                    I L++W Q+   + +     P +++ L++ +  ++AI  ++L   A +  +
Sbjct: 357 DLPESSASTINLAEWKQSCYDAMNDDFNSPILIAKLFDAVKWINAIKEESLKISAEDKLE 416

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
              +L  F     ILG+   ++ L+ N   +S A+E L++ R      + F+++D IR Q
Sbjct: 417 LKQVLHDF--LFDILGLRDGEKSLDNNSDKLSGAVELLIKLRAEARNNRDFATSDKIRDQ 474

Query: 435 LESKGFILEDYKN 447
           L+  G  L+D K+
Sbjct: 475 LQEMGIQLKDGKD 487


>gi|189219647|ref|YP_001940288.1| Cysteinyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186505|gb|ACD83690.1| Cysteinyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 469

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 173/479 (36%), Positives = 253/479 (52%), Gaps = 44/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            +++NTL R++     I+P  + +Y CGPTVY+ AHIGN R  +  D+L R L  + G K
Sbjct: 11  FQLFNTLSRRVEPINPINPPQVTIYACGPTVYNLAHIGNFRTFLCVDLLRRALELF-GYK 69

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +  N TD+DDK I  +R          A+S  T +   +F KD   L  L P  QPR
Sbjct: 70  -VVHAMNYTDVDDKTIAASR------AAGVALSAYTQRYIDEFEKDMRSLHMLKPHFQPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEK 182
           AT HI +MI  I+ ++   HAY   +  + F  +S P YG  S  + D+ K+GT+V  ++
Sbjct: 123 ATEHIEKMIEFIRQLLEKDHAYIGVDGSVYFRINSFPEYGKLSHLEKDKLKLGTQVFSDE 182

Query: 183 YHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           Y K+N  DF LWK  ++   E GW SPW  GRPGWHIECS MS  YLG+  DIH GG+DL
Sbjct: 183 YVKENYGDFALWKARKTEDGEIGWISPWEIGRPGWHIECSTMSMCYLGEEIDIHCGGVDL 242

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W H   + +EG KMSKS GN  T+ +++  K F  R
Sbjct: 243 IFPHHENEIAQSESVTG-KNFVRHWFHVSHVLVEGEKMSKSLGNIYTLRDII-NKGFSPR 300

Query: 301 SWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
                V+R  +L  +HYR+ ++FT Q +  +   L +  Q  +    I P+         
Sbjct: 301 -----VLRYHLLTSSHYRQTLNFTWQGMESSREALKRIDQWLSRLQNIPPSQFQQQEGPE 355

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHD---LLPIFNASAHILGIEVCKEH 400
                   + AL +DLN   A+  L +  R + +  D    LP  + +  ++   +    
Sbjct: 356 QQLFVRRFIEALADDLNITEAVGHLFEWIRLTNRLMDKGEALPQIDKAWQLVDAVLGVGE 415

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           LN  +   I+ L+  R    K K +  +D IR++L+  G+I++D   P+ GQ++  WK+
Sbjct: 416 LNVQVPPEIQSLLAIRAEARKHKDWQKSDNIRQKLQEMGWIVQD--TPE-GQKV--WKE 469


>gi|145219092|ref|YP_001129801.1| cysteinyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205256|gb|ABP36299.1| cysteinyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 483

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 170/489 (34%), Positives = 250/489 (51%), Gaps = 66/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R+   F  + P  + +YVCGPTVY  AH+G+A+  + FDV+ R LR   G +
Sbjct: 3   LAIYNSLGREKQPFTPLHPGMVGIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRQS-GYR 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YV+NITD+          +DKI  +AR E    P+      I    T+ F +D  R+
Sbjct: 62  -VKYVQNITDVGHLSDDADEGEDKIARQARLEKTD-PME-----IAQYYTRSFYEDMDRM 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKIDEQ 173
             L P   P AT HIP+ I L++ ++  GHAYE N  + F   S P YG  S R  ++  
Sbjct: 115 GVLRPNIAPLATGHIPEQIALVEALVKSGHAYEVNGNVYFSVESFPGYGKLSGRTDLEAV 174

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           + G RV  +  K+NP+DF LWK++     M+  W SPWG G PGWH+ECSAMS  YLG+ 
Sbjct: 175 QSGARVGVRSEKRNPSDFALWKKAEESHLMQ--WSSPWGMGYPGWHLECSAMSMKYLGET 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIHGGG++  FPHHE EIAQS  A+  +     W+HN  + + G KM KS  N + + E
Sbjct: 233 IDIHGGGMENRFPHHECEIAQSEAANG-KPYVRYWMHNNMVTVNGTKMGKSLKNAVNLKE 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------ST 342
           +  T          P+ IR  +L +HYR P+D++   +  +   L K  +T       + 
Sbjct: 292 IFTTIN--------PLAIRFFILQSHYRSPLDYSDAAIAASTAGLQKLRETRQRLQGATA 343

Query: 343 SKGIIDPAVL-----SALYNDLNTVSAIQALHKLARESTKNHDL-----LPIFNASAHIL 392
             G ++ A        A+ +D NT  AI AL   A+      D       P   A+A + 
Sbjct: 344 GTGAMNVAPFRERFREAMDDDFNTPVAIAALFDFAKALNAALDRPEGLDQPSLGAAADLF 403

Query: 393 ---GIEVCK--EHLNKNIS----------IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
              G++V    EH + +I            A++ L++ R      K F+++D IR  L++
Sbjct: 404 TMAGVDVLGILEHDSGSIGNGAGDRQRLEGAMKVLMELRSAARSEKDFATSDLIRDGLKA 463

Query: 438 KGFILEDYK 446
            G  ++D +
Sbjct: 464 AGIEIKDTR 472


>gi|262183479|ref|ZP_06042900.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 470

 Score =  261 bits (668), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 163/481 (33%), Positives = 246/481 (51%), Gaps = 63/481 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R   EF+ + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 1   MRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A + +   P  + +S       ++F K    L  L P+ +PR
Sbjct: 60  -VALVRNVTDIDDKILTKAAENNR--PWWEWVSTYE----REFTKAYNTLGVLPPSVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----------EIIFDTSSI-----PNYGSFSRRK 169
           AT  + QM+  +Q +I  G AY   N           + FD ++       +YGS S  +
Sbjct: 113 ATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSVYFDVAAWNATEGSDYGSLSGNR 172

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           ++E + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG 
Sbjct: 173 VEEMEQGE--TDNAGKRSPQDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGG 230

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I 
Sbjct: 231 EFDIHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSIA 288

Query: 290 ELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTS 341
            +LE  +        PV +R  +   HYR  ++++   LTEA       E  + K+   +
Sbjct: 289 NMLEIVR--------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVGKF--EN 338

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHD----LLPIFNASAHIL 392
             KG   PA   A+ +D+    A+  +H   R   K     N +    L     A A +L
Sbjct: 339 VEKGEWTPAFEEAMNDDIAVPKALAEIHTTVRAGNKALSEGNREEAKRLAGAVRAMAAVL 398

Query: 393 GIEVCKEHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           G +   E    +         + + +   ++ R      K +++AD +R +L + G  + 
Sbjct: 399 GFDPLDEQWKDSGEESGAEAALDVLVRAELERRTTARAEKDWATADAVRDRLAAAGITIT 458

Query: 444 D 444
           D
Sbjct: 459 D 459


>gi|153824225|ref|ZP_01976892.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518251|gb|EAZ75476.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 263

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 129/271 (47%), Positives = 175/271 (64%), Gaps = 10/271 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------AETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           HHENEIAQSCCA   +   N W+H+G + ++
Sbjct: 234 HHENEIAQSCCAHDTQYV-NTWMHSGMVMVD 263


>gi|227502088|ref|ZP_03932137.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077147|gb|EEI15110.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 468

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 170/482 (35%), Positives = 249/482 (51%), Gaps = 61/482 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           ++I++T  R   +F+ I P +  +Y+CG T     HIG+ R  + FD+L R LL   Y  
Sbjct: 4   LRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGYD- 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  L P+ +P
Sbjct: 63  --VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNLLGVLPPSVEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYE------ANNEIIFDTSSI-----PNYGSFSRRKIDE 172
           RAT  + QM+  +Q +I  G AY       A   + FD  +       +YG+ S  +++E
Sbjct: 115 RATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDVEAWTKAEGSDYGALSGNRVEE 174

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG  FD
Sbjct: 175 MEQGES--DNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGSNFD 232

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I+ +L
Sbjct: 233 IHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSISNML 290

Query: 293 ETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSK 344
           E  +        PV +R  +   HYR  ++++   LTEA       E  + ++      +
Sbjct: 291 ELVR--------PVELRYYLGSAHYRSVLEYSESALTEAAAGYRRIEGFVKRF--AGVER 340

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNAS----AHILGIE 395
           G   P    A+ +D+    A+ A+H   R   K     + D      A     AH+LG +
Sbjct: 341 GDWTPDFEDAMNDDIAVPKALAAIHTTVRAGNKDLAAGDEDAARAKAAQVRGMAHVLGFD 400

Query: 396 VCKEHLNKNIS---IAIEKLVQ---ERLILLKMKK-FSSADYIRKQLESKGFILEDYKNP 448
             +       S    A++ LVQ   ER    + +K F++AD +R +L + G  + D   P
Sbjct: 401 PLEWEDGGEASGADAALDALVQAELERRTQARAEKDFATADAVRDRLTAAGITITD--TP 458

Query: 449 DN 450
           D 
Sbjct: 459 DG 460


>gi|325962199|ref|YP_004240105.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468286|gb|ADX71971.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 488

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 170/494 (34%), Positives = 242/494 (48%), Gaps = 64/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T   ++  F  +      +Y CG TV    H+G+ R  I FD L R L +  G +
Sbjct: 3   LRFYDTASAEVRNFVPLVEGKASLYYCGATVQGMPHVGHIRSAIAFDQLTRWLAFR-GLR 61

Query: 65  CVTYVRNITDIDDKIIERARQ--------EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            VT VRN+TDIDDKI+ ++          E   +P  +  ++   +  ++F+K    L  
Sbjct: 62  -VTVVRNVTDIDDKILAKSEASFAPGFQPEAGEVPEEEWWAL-AYRYEREFLKAYDILGV 119

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQ 173
             PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ ID+ 
Sbjct: 120 SRPTYEPRATGHIPEMHALIQQLIDRGHAYPALDDSGDVYFDVRSWSKYGALTRQNIDDM 179

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           +       +  KK+P DF LWK S   EP    W SPWG GRPGWH+ECSAM + YLG  
Sbjct: 180 QAAPDADPR-GKKDPRDFALWKGSKEGEPTTASWASPWGAGRPGWHLECSAMVTKYLGTE 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  EG KMSKS GN I+  E
Sbjct: 239 FDIHGGGLDLRFPHHENEMAQSQAAGH--PFANFWMHNGMVTYEGEKMSKSIGNTISPAE 296

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE--------ILLSKWPQTST 342
           +LE            V+R  +   HYR  +D+    L EA          L     +   
Sbjct: 297 MLELAS-------PRVVRYYLGQAHYRSVLDYRPTSLQEAAAAVERIDGFLAKAAARFGK 349

Query: 343 SKGIID----------PAVLSALYNDLNTVSAIQALHKLARE-----STKNHD------- 380
            +G +D           A   A+ +DLN   A+ ALH+  R      +  N D       
Sbjct: 350 EQGSVDGGSGPSSNAMEAFSEAMDDDLNVPRALAALHETVRAGNTALAEGNDDDARLALD 409

Query: 381 ----LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
               +  +    A + GI+         + + ++  +  R      K ++++D IR+ L 
Sbjct: 410 TVRVMTDVLGLDA-VAGIDAGSGKEAAALDVLVQAQLAARAAARAQKDWAASDAIRETLA 468

Query: 437 SKGFILEDYKNPDN 450
             G ++ED   PD 
Sbjct: 469 HAGIVVED--GPDG 480


>gi|15834784|ref|NP_296543.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|11387147|sp|Q9PLE0|SYC_CHLMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|7190201|gb|AAF39040.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 475

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 248/484 (51%), Gaps = 65/484 (13%)

Query: 7   IYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +YNTL R+   F    PSN  +++Y CGPTVYD+AHIGN R  +  D+L R+L +     
Sbjct: 5   LYNTLSREKERFL---PSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDK +  AR++  S+                F  D   L  L     P 
Sbjct: 60  SVHHVMNITDVDDKTLAGARKKGCSL------EKYCQPYINAFFADLETLHILKADAYPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEK 182
           AT++IPQMI  IQ +I  G AY   ++ + F  S  PNYGS S   ++E +  +R+  ++
Sbjct: 114 ATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDADE 173

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           Y K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D
Sbjct: 174 YDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            IFPHHENEIAQS    R +     W+H+  L ++G+KMSKS GNF T+ +LL+ + F G
Sbjct: 234 NIFPHHENEIAQSESLSR-KPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQ-QGFSG 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQTS 341
                  +R  +L  HYR  ++FT + L  A   L +                   P+  
Sbjct: 292 EE-----VRYLLLQGHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPEVG 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKN-------HDLL 382
           ++      A ++++ NDLN  SA+ +L    R            E T +         +L
Sbjct: 347 SACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQHIL 406

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            +      +LG+    +    +I   +  LV+ER    K+K +  AD +R ++ S+GF +
Sbjct: 407 SLLRQIDQVLGVLPFSQ---ADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGFAI 463

Query: 443 EDYK 446
           ED K
Sbjct: 464 EDGK 467


>gi|86742926|ref|YP_483326.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
 gi|109894901|sp|Q2J545|SYC_FRASC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86569788|gb|ABD13597.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 524

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 134/352 (38%), Positives = 193/352 (54%), Gaps = 43/352 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R L      +
Sbjct: 3   LHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQAAPHVGHIRTALPFDLLRRWL--VQSGR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TDIDDKII  A ++  S+        + ++ T+ F      L  L PT QPR
Sbjct: 61  SVTFVQNVTDIDDKIIINADRDGTSV------WELATRQTRAFDDAYRTLGILPPTIQPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+MI L+  ++  G+AY +   + F   +  +YG+ S ++ D   M   V  +  
Sbjct: 115 ATGHIPEMIALVSALVEGGYAYASGGSVWFRVGAFADYGALSHQRPD--AMQPSVEAEPG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+FPH
Sbjct: 173 KADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANI--------------------------WIHNGFLNLEGRKM 278
           HENE AQ+ CA      +N                           W+H G L   G KM
Sbjct: 233 HENERAQTVCAATARPASNAASADSPGPGGGEPGGGEPSSGEMARYWMHVGLLTTGGTKM 292

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           SKS GN + + + L+  +         V+R  +L  HYR  ++++ + L E+
Sbjct: 293 SKSLGNSVLVADALDAVR-------PQVLRYHLLSAHYRSTLEYSAEALAES 337


>gi|270284951|ref|ZP_06194345.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270288977|ref|ZP_06195279.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336349|ref|ZP_07224551.1| cysteinyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
          Length = 479

 Score =  261 bits (667), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 248/484 (51%), Gaps = 65/484 (13%)

Query: 7   IYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +YNTL R+   F    PSN  +++Y CGPTVYD+AHIGN R  +  D+L R+L +     
Sbjct: 9   LYNTLSREKERFL---PSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFL--GY 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDK +  AR++  S+                F  D   L  L     P 
Sbjct: 64  SVHHVMNITDVDDKTLAGARKKGCSL------EKYCQPYINAFFADLETLHILKADAYPH 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEK 182
           AT++IPQMI  IQ +I  G AY   ++ + F  S  PNYGS S   ++E +  +R+  ++
Sbjct: 118 ATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDADE 177

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           Y K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D
Sbjct: 178 YDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGGVD 237

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            IFPHHENEIAQS    R +     W+H+  L ++G+KMSKS GNF T+ +LL+ + F G
Sbjct: 238 NIFPHHENEIAQSESLSR-KPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQ-QGFSG 295

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQTS 341
                  +R  +L  HYR  ++FT + L  A   L +                   P+  
Sbjct: 296 EE-----VRYLLLQGHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPEVG 350

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKN-------HDLL 382
           ++      A ++++ NDLN  SA+ +L    R            E T +         +L
Sbjct: 351 SACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQHIL 410

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            +      +LG+    +    +I   +  LV+ER    K+K +  AD +R ++ S+GF +
Sbjct: 411 SLLRQIDQVLGVLPFSQ---ADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGFAI 467

Query: 443 EDYK 446
           ED K
Sbjct: 468 EDGK 471


>gi|300859175|ref|YP_003784158.1| cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300686629|gb|ADK29551.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206865|gb|ADL11207.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302331429|gb|ADL21623.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308277117|gb|ADO27016.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 465

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 245/472 (51%), Gaps = 54/472 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + +F  +   +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 3   LRIFDTGTRSLRDFTPLREGHASIYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +EH   P  + +S       ++F     +L  L P+ +PR
Sbjct: 62  -VAFVRNVTDIDDKILRKA-EEH-GRPWWEWVSTYE----REFTWAYDQLGVLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRV 179
           AT H+ QM+  +Q +I +G+AY+A   + FD S+       +YGS S  K++E + G   
Sbjct: 115 ATGHVTQMVDYMQRLIDNGYAYDAEGSVYFDVSAWTAATGSDYGSLSGNKVEEMEQGE-- 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            + + K+   DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIH GGLD
Sbjct: 173 TDNHGKRGSHDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATWYLGGEFDIHCGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A   +  A  W+HN ++ + G KMSKS GN +++  +LE  +   
Sbjct: 233 LQFPHHENEIAQSHAAG--DGFAQYWMHNHWVTMSGEKMSKSLGNVLSVPNILEKVR--- 287

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAV 351
                PV +R  +   HYR  ++++   L EA       E  L+K        G   P  
Sbjct: 288 -----PVELRYYLGSAHYRSMLEYSDNALLEAAAGYRRIEAFLAK--VGPVEIGEWTPEF 340

Query: 352 LSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEHLN 402
             AL +DL    A+  +H L R         ++T+   +     A   +LG++   EH  
Sbjct: 341 AKALDDDLAVPKALAEIHGLVRAGNTALSSGDTTEAQRIASSIRAMTSVLGVDPQSEHWA 400

Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                       + I +   ++ R    + K +++AD +R +L + G  + D
Sbjct: 401 TESDTSEDAMAALDILVRAELERRTAAREAKDWATADQVRDRLAAAGITVTD 452


>gi|293194132|ref|ZP_06609933.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292819774|gb|EFF78785.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 454

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 146/391 (37%), Positives = 214/391 (54%), Gaps = 42/391 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y++   ++     + P  + +Y+CG TV    H+G+ R  + FD L R LR    E 
Sbjct: 2   LHLYDSKSARVQPLTPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+      H S            +  ++F +    L   APT++PR
Sbjct: 61  -VTYVRNVTDIDDKIL------HKSAEAGWDWWAWAYRFEREFTQAYETLGVQAPTYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKM---GTRVP 180
           AT HIP+ + L+Q++I  GHAY + +  + FD  S  +YGS +R+++ + +      ++ 
Sbjct: 114 ATGHIPEQLDLVQSLIDAGHAYSDGHGNVYFDVHSQADYGSLTRQRLADMRTTEDDAQID 173

Query: 181 EKYH--KKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           E     K++P DF LWK + P EP    W+SPWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 174 EAVEAGKRDPRDFALWKATKPGEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIHG 233

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHENE AQS  A    + A +W+HN ++  +G KMSKS GN ++I  L E  
Sbjct: 234 GGIDLRFPHHENEQAQSHGAGW--EFARLWVHNAWVTTKGEKMSKSLGNVLSIGALTE-- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSK 344
                 +PA  +R A+   H+R  I++  + L  A     K+            +   S+
Sbjct: 290 -----EYPAVAVRWALSTVHHRSSIEWGAETLPAAHAAWEKFSTFVARAIETAGEAPASE 344

Query: 345 GIIDPAVL-----SALYNDLNTVSAIQALHK 370
             + PA L     +A+ +DLN   A+  LH+
Sbjct: 345 IALAPADLPEAFVAAMDDDLNVAGALAVLHE 375


>gi|116622355|ref|YP_824511.1| cysteinyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122254163|sp|Q021Y7|SYC_SOLUE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116225517|gb|ABJ84226.1| cysteinyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 466

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 165/488 (33%), Positives = 239/488 (48%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL +++ EF     + +RMY CGPTVYDFAHIGN R     D+L ++LR    + 
Sbjct: 3   LRFYNTLSQQVEEFTPASDNTVRMYTCGPTVYDFAHIGNFRTFTFVDLLRKVLRANGFQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V NITD+DDKII  A  +H S+         T   T+ F++D   L    P     
Sbjct: 62  -LNHVMNITDVDDKIIRNAVAQHQSL------EQYTKIYTEAFLEDCKMLRLERPERIAP 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT HI  M+  I+ +    H Y ++  + F  +S P YG  S         G RV  ++Y
Sbjct: 115 ATEHIHDMVSAIERLGDSQHTYASDGSVYFKIASFPGYGKLSHNDFSGNLAGARVDVDEY 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +  DF LWK     EP W++  G GRPGWHIECS M+  YLG+  DIH GG+DL+FP
Sbjct: 175 EKADARDFALWKTPKEGEPFWDTTIGPGRPGWHIECSVMAIKYLGETLDIHAGGIDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      +  +  W+H  FL +EG+KMSKS GN+ T+ +L+       + + 
Sbjct: 235 HHENEIAQSESLTG-KLFSRFWLHAEFLMVEGQKMSKSLGNYYTLRDLV------AKGYE 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGII------ 347
              IR  +    YR+ ++FT+  L  A I + +           P       I+      
Sbjct: 288 PESIRYLLASVPYRKSLNFTLDGLKAARIAIERLRNFKRRLETEPFAEGLSAILAERTAQ 347

Query: 348 -DPAVLSALYNDLNTVSAIQALHKLARE--------------STKNHDLLPIFNASAHIL 392
              A +  L  DLNT  A+ ++ +  R+              +T   + L  F++   +L
Sbjct: 348 ASQAFIGGLNEDLNTAEALASVFEYVRDLNSAMDSGEFRAGNTTAALEFLARFDSIFDVL 407

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                   L+      I+  +  R    K + F+ AD IR QL ++G ILED K+     
Sbjct: 408 KPTAKAGELS---DAEIDAQIAARAAAKKSRDFALADQIRDQLLAQGIILEDTKSG---- 460

Query: 453 RMTRWKQK 460
              RWK+K
Sbjct: 461 --VRWKRK 466


>gi|150019973|ref|YP_001305327.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|187631644|sp|A6LJ41|SYC_THEM4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149792494|gb|ABR29942.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 469

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 168/472 (35%), Positives = 239/472 (50%), Gaps = 52/472 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I NT   K  +     P  ++MYVCGPTVY++ HIGNARP +VFD   R L Y  G K
Sbjct: 3   IYITNTESGKKEKLVPNTPGVVKMYVCGPTVYNYIHIGNARPAVVFDAFRRFLEYR-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TDIDDKII  A      +   D      +    ++ KD   L   A    PR
Sbjct: 62  VVM-VQNFTDIDDKIINEANAW--GVNFKDVADTFIA----EYWKDAENLGIRAANFHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+++ +++  ++ +I   +AY A+N ++ F      +YG  S +K+++   G RV    
Sbjct: 115 TTDYVKEIVEAVEKLIAKNYAYVADNGDVYFSVKEFKDYGKLSGKKLEDLVAGARVEVSE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF LWK   P EP W+SPWG GRPGWHIECS MS   LG  FDIH GG DLIFP
Sbjct: 175 LKKNPLDFALWKAVKPGEPSWDSPWGNGRPGWHIECSVMSQRLLGDSFDIHAGGEDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE+E AQS      +  A  W+HNG +   G KMSKS GN   + E +  K++G  +  
Sbjct: 235 HHEDEKAQSEALTG-KPFAKYWMHNGMIITRGDKMSKSIGNVFLVREAV--KRYGKDA-- 289

Query: 304 APVIRLAMLMTHYREPIDFT-----------VQRLTEAEILLSKW-----PQTSTSKGII 347
              ++L +L  HYR PI+F+           ++ L        K+     P+  T    +
Sbjct: 290 ---VKLFLLSKHYRTPIEFSHEIMFNTKKAALRILNTLNRFEEKYPYPLVPKRDTFMNDM 346

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHIL-- 392
           +   + AL +D NT   I  + +L+++  K  D             +  +F +   I   
Sbjct: 347 EARFVEALEDDFNTPRVIALIFELSKDLNKAMDEGKEEEALKRYHLITRVFGSVLGIFER 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G++V + + N+ I   IE+++  R  L K K ++ AD IR  L   G  + D
Sbjct: 407 GLKVVETN-NQKI---IEEILSVRQELRKEKDYNVADKIRDALLRAGVKILD 454


>gi|54022402|ref|YP_116644.1| cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|61216444|sp|Q5Z2R1|SYC_NOCFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|54013910|dbj|BAD55280.1| putative cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 467

 Score =  261 bits (666), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 165/492 (33%), Positives = 248/492 (50%), Gaps = 67/492 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R + EF  + P    +Y+CG TV    HIG+ R  + FDVL R L+ +  + 
Sbjct: 3   LRLFDTESRTMREFAPLVPGRASVYLCGATVQGEPHIGHVRSGVAFDVLRRWLQAH--DY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A +     P  +      +   + F +    L    P+ +PR
Sbjct: 61  DVWFIRNVTDIDDKILNKAAE--AGRPWWE----WAATYERAFDRAYRLLGVQPPSAEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ L++ +I  GHAY +   + FD  S P YG+ S  K+D+   G    E   
Sbjct: 115 ATGHITQMVELMRRLIERGHAYASAGNVYFDVQSYPEYGALSGHKLDDVHQGESAGEG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG  FDIH GG+DL+FPH
Sbjct: 173 KRDPRDFTLWKAAKPGEPSWPSPWGPGRPGWHLECSAMAEFYLGAEFDIHCGGMDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++ + G KMSKS GN +++  +L   +       A
Sbjct: 233 HENEIAQSKAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSVPNMLTKVR-------A 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------------------EILLSKWPQTSTSKG 345
             +R  +   HYR  ++++ + L +A                   EI + KW        
Sbjct: 284 VELRFYLGSAHYRSMLEYSDKALDDAVAGYQRIEAFLHRTAERVGEIPVGKWTD------ 337

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------HILGI-EVCK 398
               A   A+ +DL    A+  + +L  E  K  +   +  A         +LGI  VC 
Sbjct: 338 ----AFAEAMDDDLAVPRALAEVFRLVTEGNKALEAGAVDTARELGGQVRAMLGILGVCP 393

Query: 399 -----EHLNKN--ISIAIEKLVQERLILLKM----KKFSSADYIRKQLESKGFILEDYKN 447
                +H   +     A++ LV+  L   +     K +++AD +R +L + G  + D  N
Sbjct: 394 FDPQWDHKQDDSVAQTALDVLVRAELDRRQQARADKDWATADAVRDRLHAAGIDVTDTPN 453

Query: 448 -PDNGQRMTRWK 458
            P+   R  R K
Sbjct: 454 GPEWSLRTARGK 465


>gi|68535378|ref|YP_250083.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|109894894|sp|Q4JXJ2|SYC_CORJK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68262977|emb|CAI36465.1| cysS3 [Corynebacterium jeikeium K411]
          Length = 478

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/486 (32%), Positives = 246/486 (50%), Gaps = 67/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T  R++ +F+ I   +  +Y+CG TV    HIG+ R  + FD+L   L     + 
Sbjct: 3   LRIYDTAARQLRDFEPIREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPIND-AISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V +VRN+TDIDDKI+ +A +       ND       + + + F     +L    P+ +P
Sbjct: 62  -VAFVRNVTDIDDKILTKAAE-------NDRPWWEWAATHERAFNWAYDQLGVTPPSIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+PQMI  +Q II +GH Y A+  +    ++I NYG  S +K+DE   G       
Sbjct: 114 RATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPATIDNYGFLSGQKLDEMDQGESA--GT 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG  FDIH GGLDL FP
Sbjct: 172 GKRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGSEFDIHCGGLDLQFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+  A   +  A  W+HNG++ + G KMSKS GN ++I  +L+  +       
Sbjct: 232 HHENEAAQATAAG--DGFARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR------- 282

Query: 304 APV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAVL--- 352
            PV +R  +   HYR  ++++   L EA       E  L +  +  T +  +DP  L   
Sbjct: 283 -PVELRYYLGSAHYRSMLEYSEAALGEAAAGYRRIEKFLVRAIEYVTGETAVDPQALPVG 341

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHIL 392
                    + +DL    ++  +H + RE  K  D  P                A A +L
Sbjct: 342 EMPAQFAEKMDDDLAVPQSLAVIHDVVREGNKLLDAKPTDEAKQQVKEIAGQVRAMAAVL 401

Query: 393 GIEVCKEHLNKN--------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           G++   E   ++              + + ++  ++ R      K +++AD +R +L   
Sbjct: 402 GVDPLSEAWLESTKAAAGGSDVAMGALDVLVKAELERRAEARAAKDWATADEVRDRLAEA 461

Query: 439 GFILED 444
           G  + D
Sbjct: 462 GIEVTD 467


>gi|326383076|ref|ZP_08204765.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198212|gb|EGD55397.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 464

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 156/482 (32%), Positives = 241/482 (50%), Gaps = 62/482 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++  R++ +F  + P    +Y+CG TV    HIG+ R  I FDVL R L Y   + 
Sbjct: 3   LRLYDSATREVRDFVPLRPGTASVYLCGATVQGVPHIGHVRSGIAFDVLRRWLDYRGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +     P  +      + + ++F +    L  L P+ +PR
Sbjct: 62  -VLFVRNVTDIDDKILTKAAE--AGRPWWE----WAATHEREFTRAYDALGVLPPSAEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I QM+  +Q +I  GHAY ++  + FD  S+P YGS S  ++++   G        
Sbjct: 115 ATGFITQMVEYMQRLIERGHAYSSDGNVYFDVRSLPEYGSLSGHRLEDVHQGESAGTG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++  LG  FDIH GG+DLIFPH
Sbjct: 173 KRDPRDFTLWKAAKPGEPAWPTPWGDGRPGWHLECSAMATSLLGAEFDIHCGGMDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  +LE  +       A
Sbjct: 233 HENEIAQSHGAG--DGFAQYWLHNGWVTMSGEKMSKSLGNVVAIPAMLERVR-------A 283

Query: 305 PVIRLAMLMTHYREPIDFT------------------------VQRLTEAEILLSKWPQT 340
             +R  +   HYR  ++++                        V R+   E+        
Sbjct: 284 VELRYYLGSAHYRSMLEYSEGALAEAAAGYRRIESFVHRVADRVGRVDVGEVNDDFAAAL 343

Query: 341 STSKGIIDPAVLSALYNDLNTV-SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
               G+  PA L+A++N +    +A++     A +  +   +     A   +LG +    
Sbjct: 344 DDDLGV--PAALAAVHNAVREGNTALE-----AGDGARALAIAAQVRAMTAVLGTDPLDP 396

Query: 400 H---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           H          +  + + I+  +  R      K +++AD +R +L   G  + D   PD 
Sbjct: 397 HWTAAGADDEAHDALDVLIKAELDRRAQARAAKDWATADEVRDRLAEAGVEVTD--TPDG 454

Query: 451 GQ 452
            Q
Sbjct: 455 AQ 456


>gi|295394484|ref|ZP_06804707.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972663|gb|EFG48515.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 456

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/466 (34%), Positives = 241/466 (51%), Gaps = 72/466 (15%)

Query: 30  VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS 89
           +CG TV    HIG+ R  +VFD L R + Y   +  VT VRN+TDIDDKI+ ++  E   
Sbjct: 1   MCGATVQGAPHIGHMRSAVVFDQLRRWMTYRNFD--VTLVRNVTDIDDKILSKSVDEGRP 58

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
              +  +        Q F +   R+    PT++PRAT HIP+MI LI  +I  GHAY A 
Sbjct: 59  WWAHAFLY------EQVFTEAYDRIGVAPPTYEPRATGHIPEMIELIARLIEAGHAYPAQ 112

Query: 150 N---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK---RSTPMEPG 203
           +   ++ FDT+S P YGS +R+     +     P +  K++P DF +WK    + P+   
Sbjct: 113 DGSGDVYFDTASWPEYGSLTRQDRGSMEDAADAPVR-GKRDPRDFAVWKGRKDADPVTAS 171

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W++PWGRGRPGWHIECSAMS+ YLG  FDIHGGG DL FPHHENE+AQS  A   +  AN
Sbjct: 172 WDTPWGRGRPGWHIECSAMSTKYLGAQFDIHGGGRDLRFPHHENEMAQSNAAG--DPFAN 229

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +W+H+G ++++G KMSKS GN I  ++L +        +   ++R  +   HYR  ++FT
Sbjct: 230 LWMHSGLVSVDGNKMSKSLGNSIFAHDLFD-------EYSPLLVRFFLTSGHYRSQLEFT 282

Query: 324 VQRLTEAEILLSK----WPQTSTSKGIIDPAVLS----------------ALYNDLNTVS 363
              + + +  +++      +  T  G   PAV+S                A+ +DL+T  
Sbjct: 283 RDNVAQQQAAVTRITNFLTRARTELGDTAPAVVSFESGYEGGHVAPEFAEAMDDDLSTPR 342

Query: 364 AIQALHKLARESTKNHDLLPIFNAS-----AHIL-GIEVCKEHLNKN------------- 404
           A+  +       +K + LL    ++     AH L  +E   + L  N             
Sbjct: 343 ALAVVFDYV---SKGYKLLEAGGSANREELAHTLVAVETMLDTLGINPTSLQWAETASGS 399

Query: 405 ------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + + + +L   RL   K K F++AD IR QL   G ++ED
Sbjct: 400 DSATQALDVLVSELANRRLEAKKAKDFANADAIRDQLTQAGIVIED 445


>gi|15843193|ref|NP_338230.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|13883546|gb|AAK48044.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|323717774|gb|EGB26972.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 469

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/472 (33%), Positives = 246/472 (52%), Gaps = 50/472 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRY 59
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R  L R 
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           Y     V ++RN+TDI+DKI+ +A                 + + + F      L  L P
Sbjct: 64  Y----DVAFIRNVTDIEDKILAKA------AAAGRPWWEWAATHERAFTAAYDALDVLPP 113

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V
Sbjct: 114 SAEPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGV 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+D
Sbjct: 174 AAG--KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN +++  +L+      
Sbjct: 232 LVFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQ------ 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKW-PQTSTSKGIIDPA----- 350
           R  PA  +R  +   HYR  ++F+   +Q   +A + L  +  +  T  G + P      
Sbjct: 284 RVRPAE-LRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPR 342

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK-----NHD-LLPIFNASAHILGIEVCK------ 398
              AL +DL+   A+  +H +  E  +     +HD  L   +A   ++GI  C       
Sbjct: 343 FAEALDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRW 402

Query: 399 EHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           E  ++       + + ++  +Q R    + + ++ AD IR +L+  G  + D
Sbjct: 403 ESRDETSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTD 454


>gi|31794757|ref|NP_857250.1| cysteinyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|57117128|ref|YP_177992.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|121639500|ref|YP_979724.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663444|ref|YP_001284967.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824786|ref|YP_001289540.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167967115|ref|ZP_02549392.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215405629|ref|ZP_03417810.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215429081|ref|ZP_03427000.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215432553|ref|ZP_03430472.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218755364|ref|ZP_03534160.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219559657|ref|ZP_03538733.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224991997|ref|YP_002646686.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800621|ref|YP_003033622.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234153|ref|ZP_04927477.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis C]
 gi|254366143|ref|ZP_04982187.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552689|ref|ZP_05143136.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260184497|ref|ZP_05761971.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260198622|ref|ZP_05766113.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260202768|ref|ZP_05770259.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289441010|ref|ZP_06430754.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289445174|ref|ZP_06434918.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555844|ref|ZP_06445054.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           605]
 gi|289571822|ref|ZP_06452049.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T17]
 gi|289572233|ref|ZP_06452460.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis K85]
 gi|289747417|ref|ZP_06506795.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           02_1987]
 gi|289752295|ref|ZP_06511673.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T92]
 gi|289755709|ref|ZP_06515087.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           EAS054]
 gi|289763759|ref|ZP_06523137.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis GM
           1503]
 gi|294993700|ref|ZP_06799391.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297636255|ref|ZP_06954035.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297733248|ref|ZP_06962366.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|306786487|ref|ZP_07424809.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu003]
 gi|306790852|ref|ZP_07429174.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu004]
 gi|306791175|ref|ZP_07429477.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu005]
 gi|306795960|ref|ZP_07434262.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu006]
 gi|306801208|ref|ZP_07437876.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu008]
 gi|306805420|ref|ZP_07442088.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu007]
 gi|306974052|ref|ZP_07486713.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu010]
 gi|307081761|ref|ZP_07490931.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu011]
 gi|307086377|ref|ZP_07495490.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu012]
 gi|313660578|ref|ZP_07817458.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|61248033|sp|P0A634|SYC_MYCTU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61248034|sp|P0A635|SYC_MYCBO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166225298|sp|A1KPR6|SYC_MYCBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166225299|sp|A5U8Q5|SYC_MYCTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781686|sp|C1AI39|SYC_MYCBT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|31620354|emb|CAD95797.1| CYSTEINYL-TRNA SYNTHETASE 1 CYSS1 (CYSTEINE--TRNA LIGASE 1) (CYSRS
           1) (CYSTEINE TRANSLASE) [Mycobacterium bovis AF2122/97]
 gi|41352809|emb|CAE55617.1| CYSTEINYL-TRNA SYNTHETASE 1 CYSS1 (CYSTEINE--TRNA LIGASE 1) (CYSRS
           1) (CYSTEINE TRANSLASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|121495148|emb|CAL73634.1| Cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124603821|gb|EAY61784.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis C]
 gi|134151655|gb|EBA43700.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507596|gb|ABQ75405.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148723313|gb|ABR07938.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis F11]
 gi|224775112|dbj|BAH27918.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322124|gb|ACT26727.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           1435]
 gi|289413929|gb|EFD11169.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289418132|gb|EFD15333.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440476|gb|EFD22969.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           605]
 gi|289536664|gb|EFD41242.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis K85]
 gi|289545576|gb|EFD49224.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T17]
 gi|289687945|gb|EFD55433.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           02_1987]
 gi|289692882|gb|EFD60311.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T92]
 gi|289696296|gb|EFD63725.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           EAS054]
 gi|289711265|gb|EFD75281.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis GM
           1503]
 gi|308328975|gb|EFP17826.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu003]
 gi|308332797|gb|EFP21648.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu004]
 gi|308340288|gb|EFP29139.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu005]
 gi|308343627|gb|EFP32478.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu006]
 gi|308348094|gb|EFP36945.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu007]
 gi|308352017|gb|EFP40868.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu008]
 gi|308356654|gb|EFP45505.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu010]
 gi|308360609|gb|EFP49460.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu011]
 gi|308364197|gb|EFP53048.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu012]
 gi|328460352|gb|AEB05775.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           4207]
          Length = 469

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 160/475 (33%), Positives = 247/475 (52%), Gaps = 50/475 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRY 59
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R  L R 
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           Y     V ++RN+TDI+DKI+ +A                 + + + F      L  L P
Sbjct: 64  Y----DVAFIRNVTDIEDKILAKA------AAAGRPWWEWAATHERAFTAAYDALDVLPP 113

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V
Sbjct: 114 SAEPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGV 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+D
Sbjct: 174 AAG--KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN +++  +L+      
Sbjct: 232 LVFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQ------ 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKW-PQTSTSKGIIDPA----- 350
           R  PA  +R  +   HYR  ++F+   +Q   +A + L  +  +  T  G + P      
Sbjct: 284 RVRPAE-LRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPR 342

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK-----NHD-LLPIFNASAHILGIEVCK------ 398
              AL +DL+   A+  +H +  E  +     +HD  L   +A   ++GI  C       
Sbjct: 343 FAEALDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRW 402

Query: 399 EHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           E  ++       + + ++  +Q R    + + ++ AD IR +L+  G  + D  +
Sbjct: 403 ESRDETSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTAD 457


>gi|307720859|ref|YP_003891999.1| cysteinyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978952|gb|ADN08987.1| cysteinyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 466

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 147/392 (37%), Positives = 215/392 (54%), Gaps = 31/392 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I++++++   +F  +    + +YVCGPTVYD AH+G+A+  +VFD+L R+LR    + 
Sbjct: 1   MHIFDSVQKTKRKFTPLKEGKVSLYVCGPTVYDDAHLGHAKSALVFDLLTRVLRANGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITDIDDKII++A      I     I  IT   T+ F  +   +    PT +P+
Sbjct: 60  -VTYARNITDIDDKIIKKA------IEQKKEIKEITDFYTETFHTEMEAIGVKRPTIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ +  M+ LIQ +I  GHAY+    ++ FDT+S   Y S S R  +E+    RV    
Sbjct: 113 ATHSLEAMVDLIQKLIDKGHAYQTPEGDVYFDTASDSEYLSLSHRMQNEEDKQERVVSST 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGGL 238
           +KKN ADF LWK        + SP+G GRPGWH+ECSAM   +L         DIHGGG 
Sbjct: 173 YKKNHADFALWKSVKDNSITFSSPFGAGRPGWHLECSAMIEKHLAYRDTPFAIDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ C       +N W+HNGF+N+EG KMSKS GN   + + L      
Sbjct: 233 DLLFPHHENEAAQTRCGTN-HALSNYWMHNGFVNIEGEKMSKSLGNSFFLKDAL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDP 349
            + +   V+R  +L THYR   +F  Q L  ++  L K  +           + +     
Sbjct: 286 -KEYDGEVLRFYLLSTHYRSNFNFNTQDLAASKKRLDKLYRLKKRLFGLAPCSDETTFKK 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
            +L AL +D+N  SA+  + ++   + +  D+
Sbjct: 345 ELLEALNDDMNVSSALALIDEMISGANETLDI 376


>gi|160916264|ref|ZP_02078471.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
 gi|158431988|gb|EDP10277.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
          Length = 446

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 168/478 (35%), Positives = 250/478 (52%), Gaps = 73/478 (15%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YG 62
           ++K++N++ + I EF+ +    +RMYVCGPTVY++ HIGN RP++VFD L R L+   Y 
Sbjct: 2   EMKLFNSMTQSIEEFKPLHEGEVRMYVCGPTVYNYPHIGNVRPIVVFDTLKRTLQAIGYN 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V+   N TD+DDKII+ A++   S         IT K  + + +D   L  + P   
Sbjct: 62  VKMVS---NYTDVDDKIIKVAKEAGVS------EKEITEKFIKAYNEDRLSLHAMMPDAA 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T  +  +I  I  ++  G+AY  + ++ F  +S+ +YG  S ++I++  +G R+ E 
Sbjct: 113 PKVTETMDAIIAFINLLVEKGNAYVVDGDVYFRVNSVDDYGKLSNQQIEDLMVGARIDEN 172

Query: 183 YHKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLD 239
             K+NP DF LWKR+   E G  W+SPW  GRPGWH EC  M +    + + DIHGGG+D
Sbjct: 173 SKKENPLDFTLWKRT---EEGIRWQSPWSLGRPGWHTECVVMINDVFKEPIIDIHGGGMD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A      A  WIHNG +N++G KMSKS GN I   +++ +   GG
Sbjct: 230 LKFPHHENEIAQSKAAYGT-AIAKYWIHNGMVNIDGEKMSKSLGNVIWAKDMIAS--IGG 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPAV---- 351
                 V+R  ML THYR P++     +  A   LSK      Q      + D  +    
Sbjct: 287 N-----VLRWLMLSTHYRSPLNINEDGIETARKELSKVMQPLKQAYVKLSLADHVIGEDH 341

Query: 352 --------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
                   L+A+ +DLNT +A  AL +  +          +FN +     I+  K  L+K
Sbjct: 342 DEVLVAPFLAAMEDDLNTPNAFAALFEAVK----------VFNQTLRQREIDYAK--LSK 389

Query: 404 NISIAIEKLVQ------ERLIL--------------LKMKKFSSADYIRKQLESKGFI 441
              ++IEK++       +RL+L              +K K F  AD  R +L  +G +
Sbjct: 390 Q-CVSIEKMLDILGIESQRLVLSDEDKALHGKWRAAVKEKDFEQADMYRAKLIERGIL 446


>gi|330816203|ref|YP_004359908.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327368596|gb|AEA59952.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 457

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 137/379 (36%), Positives = 209/379 (55%), Gaps = 24/379 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I++YNT+ R+ +  +   P  + +YV GPT++D AH+GN RP +VFDVL RLLR +
Sbjct: 1   MNAPIQLYNTITREKSPLRTPVPGRVTLYVGGPTLHDHAHLGNVRPAVVFDVLARLLRLH 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y +  V +V  + D+DD+I   A      +   +++   T++    + +D   L  LAP 
Sbjct: 61  YPD--VLHVGRLADVDDRIHAAA------LAAGESVEAFTARYRDAWREDLDALGVLAPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRA+  +  ++     ++  GHAY     ++F   S P +G    R +++     R  
Sbjct: 113 VEPRASEQVAGVVEQAARLLERGHAYIEAGHVLFHVPSYPGHGRLCGRPVEDMIALARGE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               +++P DF+LWK +    P W SPWG GRPGWH +C+++    LG+  DIHGGG DL
Sbjct: 173 PAPRRRHPLDFVLWKPAEHGFPAWPSPWGAGRPGWHAQCTSILERELGREIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           I PHHENEIAQ  CA+        W+HN FL +  +KMSK   N +T+  L E       
Sbjct: 233 IHPHHENEIAQLACANG-RPPNRTWLHNAFLTVNWQKMSKPLRNVVTLRALRERAS---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGI-------IDPAVL 352
                 IRLA+L  HYR+P+++ +QRL+ A   L++ +   + ++G         D AVL
Sbjct: 288 ---GEAIRLALLSVHYRQPLNWNLQRLSSARRTLTRGYHVLAAARGTRVDTAVEPDEAVL 344

Query: 353 SALYNDLNTVSAIQALHKL 371
           +AL NDLN  +A+  L+ L
Sbjct: 345 AALRNDLNVPAALARLNGL 363


>gi|260578396|ref|ZP_05846310.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase)(CysRS)
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603418|gb|EEW16681.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase)(CysRS)
           [Corynebacterium jeikeium ATCC 43734]
          Length = 486

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 245/485 (50%), Gaps = 65/485 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T  R++ +F+ I   +  +Y+CG TV    HIG+ R  + FD+L   L     + 
Sbjct: 11  LRIYDTAARQLRDFEPIREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLD- 69

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +       N       + + + F     +L    P+ +PR
Sbjct: 70  -VAFVRNVTDIDDKILTKAAEN------NRPWWEWAATHERAFNWAYDQLGVTPPSIEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+PQMI  +Q II +GH Y A+  +    ++I NYG  S +K+DE   G        
Sbjct: 123 ATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPATIDNYGFLSGQKLDEMDQGESA--GTG 180

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG  FDIH GGLDL FPH
Sbjct: 181 KRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGSEFDIHCGGLDLQFPH 240

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+  A   +  A  W+HNG++ + G KMSKS GN ++I  +L+  +        
Sbjct: 241 HENEAAQATAAG--DGFARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR-------- 290

Query: 305 PV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAVL---- 352
           PV +R  +   HYR  ++++   L EA       E  L +  +  T +  +DP  L    
Sbjct: 291 PVELRYYLGSAHYRSMLEYSEAALGEAAAGYRRIEKFLMRAIEYVTGETAVDPQALPVGE 350

Query: 353 ------SALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHILG 393
                   + +DL    ++  +H + RE  K  +  P                A A +LG
Sbjct: 351 VPAQFAEKMDDDLAVPQSLAVIHDIVREGNKLLEAKPTDEVKQQVKQIAGQVRAMAAVLG 410

Query: 394 IEVCKEHLNKN--------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           ++   E   ++              + + ++  ++ R      K +++AD +R +L   G
Sbjct: 411 VDPLSETWLESTKAAAGGSDVAMGALDVLVKAELERRAEARAAKDWATADEVRDRLAEAG 470

Query: 440 FILED 444
             + D
Sbjct: 471 IEVTD 475


>gi|78184269|ref|YP_376704.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|109894955|sp|Q3AZ17|SYC_SYNS9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78168563|gb|ABB25660.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 499

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 173/502 (34%), Positives = 244/502 (48%), Gaps = 78/502 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L   +   
Sbjct: 3   LRLTNTLTRRTEPFTPLRPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYL--IWSGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKI++RA  E      N +++ ++ +N   F  D   L  L P   PR
Sbjct: 61  DVRFVQNFTDIDDKILKRASDE------NSSMTAVSERNIDAFHADMDSLGILRPDSMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP-- 180
           AT  +  +  LI  +   G AY A  ++ F       YG  S R + EQ+   G RV   
Sbjct: 115 ATQCLDGIRALIGELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQENAGGRVADA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EGARKQHPFDFALWKAAKEGEPSFPSPWGAGRPGWHIECSAMVRAELGDTIDIHLGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   ++ A +W+HNG +N+ G+KMSKS GNF TI  LLE       
Sbjct: 235 VFPHHENEIAQSEAATG-QELAQVWMHNGMVNVGGQKMSKSLGNFTTIRALLE------- 286

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQR----------------LTEAEILLSKWPQTSTS 343
           S  +P+ +RL +L  HYR+P+DFT +                 L E      +WP T   
Sbjct: 287 SGVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERHGQSLEWPATPAL 346

Query: 344 K--GIIDPA-------------VLSALYNDLNTVSAIQALHKLAR-------------ES 375
               ++ P+              + A+ +DLN+  A+  L  LA+              +
Sbjct: 347 APVALVAPSNHPSEPLEPLQQRFIDAMDDDLNSSGALAVLFDLAKPLRALANRLERGDRA 406

Query: 376 TKNHDLLP-------IFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKM 422
            +  D L        +    A +LG+      E      +      I+  +  R+     
Sbjct: 407 DRPADELAALALRWRLLRDLAAVLGLRREADSESSGPGDDSTNQDEIQAAIDARIAAKSA 466

Query: 423 KKFSSADYIRKQLESKGFILED 444
           K ++ AD IR +L+++G  L D
Sbjct: 467 KNYAEADRIRDELKAQGIELID 488


>gi|73669162|ref|YP_305177.1| cysteinyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|109894908|sp|Q46BZ5|SYC_METBF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|6599478|gb|AAF18751.1|AF164201_1 cysteinyl-tRNA synthetase [Methanosarcina barkeri]
 gi|72396324|gb|AAZ70597.1| cysteinyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 471

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 180/483 (37%), Positives = 246/483 (50%), Gaps = 55/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+ +    + +Y CGPTVY+  HIGN R  ++ D + R L Y  G K
Sbjct: 2   LQVYNTLTRKKEVFKPLKEGEVSIYACGPTVYNMPHIGNYRTFLMADNIVRSLEYL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  ++    S+         T K T +F K    L     +  PR
Sbjct: 61  -VKLVMNITDIDDKTIRDSKAAGMSL------KDFTDKYTAEFFKGLDMLNIKRASAYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT +I  MI L Q +I  G AYE    + +  SS P+YG  S+   D   +G  V  ++Y
Sbjct: 114 ATENIDSMIELTQKLIDKGMAYEKGGSVYYRISSFPDYGKLSKLDFDSIIIGASVDVDEY 173

Query: 184 HKKNPADFILWKRSTP--MEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L K STP  +E G  +ESPWG+ RPGWHIECS M+ +  G   D+H GG+D
Sbjct: 174 DKDNPRDFALLKTSTPEEIERGIYYESPWGKIRPGWHIECSVMAMNCFGPTLDMHLGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +  A  WIH   L +EG KMSKS GN  T+ E++   K+GG
Sbjct: 234 LIFPHHENEIAQSEGATG-KPFACYWIHGEHLIVEGEKMSKSKGNVFTLPEIV--GKYGG 290

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA-EILLSKWPQTSTSKGIID 348
                 V+R   L  HYR+ +D++            RL E  E L         +    D
Sbjct: 291 E-----VVRFMFLSVHYRKKLDYSDAFAENAKNNYLRLKETLENLEFSLESAENTDYPGD 345

Query: 349 PAVL-----------SALYNDLNTVSAIQALHKLAR------ESTKNHDLL----PIFNA 387
             VL            AL +D N   A+    +L+R      ES KN  +L     ++  
Sbjct: 346 EEVLKILPELETQFREALEDDFNIPKALTVFKELSRTANKYLESEKNRHVLEKLYSLYRQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +  LG+    E   K I   + +LV+ER    K K ++ +D IR++++S G+I++D K 
Sbjct: 406 FSDTLGL--FSESGKKEIPTEVMRLVEEREAARKKKDWTVSDAIREKIKSLGYIVQDTKE 463

Query: 448 PDN 450
             N
Sbjct: 464 GPN 466


>gi|269986687|gb|EEZ92967.1| cysteinyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 467

 Score =  260 bits (665), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 167/476 (35%), Positives = 247/476 (51%), Gaps = 58/476 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L RKI  F+A++   + MY CGPTVY++ HIGN R  I +D + R L+    + 
Sbjct: 1   MKVYNSLSRKIENFKALEQGKVTMYTCGPTVYNYVHIGNLRTFIFYDTVKRALKL--NDY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDK I+ A +   S+         T      F++D  +L     T   +
Sbjct: 59  KVKHVMNITDVDDKTIKGAIERRMSLKE------YTELYANYFLEDLNKLNVDMDTKFTK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT++I +M  +I  ++  G+AYEA++ + F+ S   +YG  S  K+D     +R+  + Y
Sbjct: 113 ATDNIDEMQKIIVKLVKEGYAYEADDGVYFNVSKFKDYGKLSGMKVDGSY--SRIKNDDY 170

Query: 184 HKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N +DF LWK   +   E  W+    +GRPGWHIECSAMS  YLGK  DIH G +DLI
Sbjct: 171 DKENASDFALWKYWDANDGEAYWKGELKKGRPGWHIECSAMSMKYLGKTIDIHCGAVDLI 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS    + +K  N W+H   L + G+KMSKS  NF T+ +L       G+ 
Sbjct: 231 FPHHENEIAQSESYSK-QKFVNYWLHAEHLLVNGQKMSKSLNNFYTLKDL------EGQG 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------WPQTS 341
           +     RL  + +HYR  +DF  + L + E LL+K                    + +  
Sbjct: 284 FNPLSFRLMAIDSHYRNKLDFNFENLRKYEKLLAKIDLSIKALNKVEKYEEKEDNYSRVQ 343

Query: 342 TSKGIIDPAVL--SALYNDLNTVSAIQ---ALHKLARESTKNHDLLPIFNASAHILGIEV 396
           T + +     L   A+ NDLNT  A+Q   +L  LA E TK      I N    +L   +
Sbjct: 344 TKQKVEKVIELFKEAVNNDLNTHEALQHFLSLLDLADEKTKKG---KIDNNEFSVLSTAI 400

Query: 397 CKEHLNKNISIAIEKLVQERLILL--------KMKKFSSADYIRKQLESKGFILED 444
            K   N  + I I+  + E +I L        + K+F  AD +R+++   G+ + D
Sbjct: 401 SK--ANDVLGIYIDYKIPEEIIALAEEREQKRREKQFIEADLLREKISENGYSIAD 454


>gi|218295459|ref|ZP_03496272.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244091|gb|EED10617.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 480

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 172/487 (35%), Positives = 255/487 (52%), Gaps = 66/487 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T++RK   F+   P ++ +YVCGPTVY   H+G+AR  IV+DVL R    + G K V
Sbjct: 5   IYDTMQRKKVPFEPATPGHVGIYVCGPTVYADPHLGHARGPIVYDVLRRYF-LHKGYK-V 62

Query: 67  TYVRNITDI---------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +V NITD+         +DK+ +RA+ E    P+      +  K T  +      L  L
Sbjct: 63  RFVSNITDVGHLTEDDEGEDKVAKRAKLEKLE-PME-----VAEKYTWSYFDAMAALNVL 116

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+  PRA+ HIP+M  L Q ++  G AY     + F   + P YG  S ++ +E + G 
Sbjct: 117 RPSIAPRASGHIPEMWELTQKLLERGVAYVREGSVYFRVRAFPEYGKLSGKRPEELRAGA 176

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           RV  +  K++P DF LWKR+   EPG    W+SPWG G PGWHIEC+AMS  YLG+ FD+
Sbjct: 177 RVEVREEKEDPLDFALWKRA---EPGHLMRWKSPWGEGYPGWHIECTAMSLKYLGEGFDL 233

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++LL 
Sbjct: 234 HAGGIDLQFPHHECEIAQAEAAGY--RFARHWMHHNHVLLEGEKMAKSTGNLVLLHDLL- 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----LLSKW------------ 337
                 R+     +R  +L THYR P+DFT   L  A+     LL+ +            
Sbjct: 291 ------RAHEPMAVRFYLLQTHYRSPMDFTFAGLEAAKKGYARLLNAYREVRARKKTAPK 344

Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQ-------ALHKL---ARESTKNHDLLPI 384
              P+   +   ++   ++A+ +DL+T  A+         LH+L   ARE +        
Sbjct: 345 GTTPELERALEALEKGFMAAIEDDLSTPEALAQFFTFLPELHRLLPEAREESLRRAEEAF 404

Query: 385 FNASAHILGI---EVCKEHLNK-NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                 ILG+    V +E L+   +   I  L++ R    + K ++ +D IR +L++ G 
Sbjct: 405 HTLGEGILGLFPERVLEEKLSGPLLEGLIGLLLELREEARRAKDYAKSDLIRDRLKALGV 464

Query: 441 ILEDYKN 447
           I+ED K 
Sbjct: 465 IVEDTKE 471


>gi|224418544|ref|ZP_03656550.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253826903|ref|ZP_04869788.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142072|ref|ZP_07804265.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510309|gb|EES88968.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131103|gb|EFR48720.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 467

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 163/478 (34%), Positives = 252/478 (52%), Gaps = 59/478 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++KIY++++++  +F  I+P  +R+YVCGPTVYD +H+G+AR  IVFD+L R+LR    E
Sbjct: 2   QLKIYDSIKKEKVDFFPINPPKVRLYVCGPTVYDDSHLGHARSAIVFDLLRRILRENGYE 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V + +N TDIDDKII ++ Q   S      ++ IT   TQ+++ +   L       +P
Sbjct: 62  --VLFAKNFTDIDDKIINKSLQSGLS------VAEITQTYTQKYLDEMAALGVERADIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT  +  +  +I+ ++  G AY+  N +I       P YGS S R + E +  +R+   
Sbjct: 114 KATESLESICAMIEKLLEKGFAYQTPNGDIYLSVEKDPQYGSLSGR-VAELETQSRIQNS 172

Query: 183 YHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLG----KVFDIHGGG 237
             K++  DF LWK    + + G++SP+G+GRPGWHIECSAM   +L        DIHGGG
Sbjct: 173 EQKRDARDFALWKSYKGIGDIGYDSPFGKGRPGWHIECSAMIKKHLAYSGEYAIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE +Q+ CAD  +  A  WIHNGF+ + G KM+KS GN   I + L     
Sbjct: 233 ADLLFPHHENEASQTRCADN-QTIAKYWIHNGFVTINGEKMAKSLGNSFFIKDAL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------WPQTSTSKG---I 346
             +++   ++R  +L THYR  ++F  + L  A+  L +        +P     +G    
Sbjct: 287 --KNYDGEILRFYLLGTHYRAGLNFAEEDLLTAKKRLDRIYRLKKRIYPIQKIDEGECCE 344

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNAS----AHILGI--- 394
              A L AL +DLN   A+  + +   ++      K  D  P+   +      +LGI   
Sbjct: 345 FREAFLEALNDDLNVSKALSVVDEFVAKANELLDKKQKDKAPMIAGNLVIIERLLGIGSK 404

Query: 395 --------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    V +E  N+     IE L+ +R    K K ++ AD IR++L   G  + D
Sbjct: 405 NPFAYFQLGVSEEQKNE-----IETLIAKRNEAKKQKDYAEADKIREELRKMGIEIMD 457


>gi|27262230|gb|AAN87396.1| Cysteinyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 454

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 164/454 (36%), Positives = 228/454 (50%), Gaps = 71/454 (15%)

Query: 58  RYYYGEKC-------VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           R+ YG          V Y++N TDIDDKII RA  E    PI      + ++  +++ +D
Sbjct: 19  RFRYGSPLPGVYRYEVDYIQNFTDIDDKIINRA-NEVGEDPIQ-----LAARFVEEYFQD 72

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              L     T  P+ + H+  +I +I+ +   GHAYE   ++ F   S  +YG  S R  
Sbjct: 73  AKALNVRPATVHPKVSTHMGDIIAMIRRLEEKGHAYEMEGDVYFSIPSFKDYGKLSGRSQ 132

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           ++ + G RV     K++P DF LWK+  P EP W+SPWG+GRPGWHIECSAMS  YLG  
Sbjct: 133 EDMQAGARVEVDERKRHPMDFALWKKVKPGEPSWDSPWGKGRPGWHIECSAMSQKYLGDT 192

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG DLIFPHHENEIAQS         A  W+HNGF+ +   KMSKS GNF T+ +
Sbjct: 193 FDIHGGGQDLIFPHHENEIAQSEACTSTAPMARYWLHNGFITVNQEKMSKSLGNFFTLRQ 252

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQT 340
           +L  KKF G      V+R  +L THYR P+DF           +QRL     LL +  + 
Sbjct: 253 IL--KKFSG-----DVVRFYLLSTHYRSPLDFDDTKLEAAQKGLQRLRTGRRLLEEALKD 305

Query: 341 STSK-GIIDPAVL----------------SALYNDLNTVSAIQALHKLARES-------- 375
           S  + G   PA                   A+ +D NT  A+  L  LARE+        
Sbjct: 306 SARQSGNNRPAAQREKLADQWTKTKNDFREAMDDDFNTALALSLLFDLARETNAFLHGGE 365

Query: 376 ---TKNHDLL----PIFNASAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKF 425
               ++  LL      F+  + ++GIE+ +     + S+    ++ L+  R    K K +
Sbjct: 366 GLGAEDLQLLRHVAETFDQLSGVMGIELSETAEAADDSLVDGLMDLLISLRAEARKKKDW 425

Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ++AD IR  L+    I+ED   P       RWK+
Sbjct: 426 ATADKIRDGLKELAIIIED--TPQG----ARWKK 453


>gi|311897431|dbj|BAJ29839.1| putative cysteinyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 461

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 162/474 (34%), Positives = 245/474 (51%), Gaps = 45/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           I+++NTL ++  EF  + P  +RM+VCGPTVY  +H+G+A+    FD++ R L  R Y  
Sbjct: 3   IRLHNTLTKRKEEFVTMTPGVVRMFVCGPTVYGLSHVGHAKTYTQFDLVARYLKKRGY-- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY +N+TD+DDKII RA  E    P +     + ++  + ++ D   L        
Sbjct: 61  --QVTYAQNLTDVDDKIIRRA-NELGMDPRD-----LATEYEKHYLDDMAALHNTNVDVF 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKIDEQKMGTRVPE 181
            RA +HI +++  +Q +I  GHAY  ++   +D ++ P YG  S R ++  +    RV E
Sbjct: 113 GRAHDHIDEIVAQVQQLIERGHAYRLDDGWYYDLTTFPGYGKLSGRTEVKAEDSLARVDE 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK   P EP W +  G GRPGWHIE +A++    G  +D+HGG +DLI
Sbjct: 173 NDQKRNPGDFALWKARKPGEPYWATALGEGRPGWHIEDTAITEALFGPQYDLHGGAVDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHE EIAQ   A  ++  A  W+H G L ++G KMSKS GNF+TI ++L+T  F    
Sbjct: 233 FPHHEAEIAQMEAASGLDPLARYWMHTGLLRVDGAKMSKSTGNFLTIRDILKTADF---- 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----------LLSKWPQTSTSKGIID--- 348
                +R A L  HYR  ++     L +A            L+ +  + S +   +    
Sbjct: 289 ---RTLRYAFLSQHYRSSMELNDTTLEQARAARRRVENFARLIDRNHEDSPASAALARNA 345

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             A+   L +DL+T  A+  L    RE  +  +  P   A A +  ++   +  + +   
Sbjct: 346 REAIFERLDDDLDTPGALAVLFDYIREQNRREE-PPGTAALALLRELDELFDAFDLDDRT 404

Query: 408 A----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                IE L+  R  L + ++F  AD IRK L  +G ++ED   PD     TRW
Sbjct: 405 TDDAEIEALLARRRELRQARRFEEADEIRKTLHQRGIVIED--TPDT----TRW 452


>gi|294055072|ref|YP_003548730.1| cysteinyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614405|gb|ADE54560.1| cysteinyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 478

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 170/487 (34%), Positives = 253/487 (51%), Gaps = 62/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R +          +R Y CGPTVY  AHIGN R  ++ D L R+L       
Sbjct: 3   VQLYDTHSRSLQTLAPEGDQPLRFYCCGPTVYGPAHIGNFRTFLIQDTLRRVLEV--DNT 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRNITD+DDK I R+++E  S+         T+K T++F  D   L  L+P+ +P 
Sbjct: 61  PVKHVRNITDVDDKTIRRSQEEGMSL------GSFTAKWTEKFHADCEALNMLSPSIEPS 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKI------DEQKMG- 176
           A  HIPQ I L++ ++  GHAY  ++  + F  SS  NYGS S+ K       +E   G 
Sbjct: 115 AVEHIPQQIALVEKLVEKGHAYATDDGSVYFRVSSFANYGSLSKLKQRELQTQNENSAGE 174

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAM-SSHYLGKVFD 232
               ++Y +++  DF LWK   P E G   W SPWG GRPGWH+ECSAM  S + G+  +
Sbjct: 175 VNDADEYDRESVTDFALWKGRKP-EDGDNYWSSPWGEGRPGWHLECSAMVDSAFDGETIE 233

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +HGGG+DL FPHHENEIAQS CA         W H+  L +EG KMSKS GN  T+++L 
Sbjct: 234 LHGGGIDLCFPHHENEIAQSECA-HGHAFCKHWFHSAHLMVEGAKMSKSLGNLYTLDDLR 292

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-----------AEILLSKWPQTS 341
           E      + +   V+R  ++   YR+ ++FT   L             AE LL+K  + +
Sbjct: 293 E------KGFNPMVVRYTLIAGSYRQQLNFTFDGLHASESAILKLERFAESLLAKTGEET 346

Query: 342 TSKGIID------PA-------VLSALYNDLNTVSAIQALHKL-------ARESTKNHDL 381
           T+  + D      PA          AL N+LNT + + A+  +         +++   +L
Sbjct: 347 TA--LADYISKEAPADFGRFGKAWDALRNNLNTAACLGAIFGVIGSNPAATLDASGAREL 404

Query: 382 LPIFNASAHILGIEV-CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           L  + +  + LG+ +   E    +    I  L Q+R    K K +  AD +R QL ++G+
Sbjct: 405 LKAYGSLLYALGLNLFTAEEKQVDAPAEIVALAQQRWEAKKAKDWGKADELRDQLLTQGW 464

Query: 441 ILEDYKN 447
           I++D K+
Sbjct: 465 IVKDSKD 471


>gi|218283691|ref|ZP_03489652.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
 gi|218215680|gb|EEC89218.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
          Length = 443

 Score =  260 bits (664), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 168/467 (35%), Positives = 240/467 (51%), Gaps = 54/467 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+  + I E + I+   I MYVCGPTVY++ HIGNARP++VFD L + L     E 
Sbjct: 1   MKLYNSYSQTIEELKPIEEGKISMYVCGPTVYNYPHIGNARPIVVFDTLKKALSAQGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+  N TD+DDKII+ A      I  N +   IT K    +      L    P + PR
Sbjct: 60  -VTFASNYTDVDDKIIKTA------IEQNVSEKEITDKFIAAYNDVRRGLHADLPDYAPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  I  ++ +G AY+   ++ F  +S   YG  S + ID+  +G R+ E   
Sbjct: 113 VTETMDRIIEFIDKMVKNGSAYQVGGDVYFRVNSDKKYGELSHQSIDDLMVGARIDENEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFP 243
           K+NP DF LWK +T     W+SPW +GRPGWH EC  M      K + DIHGGGLDL FP
Sbjct: 173 KENPLDFTLWKETTE-GIKWDSPWSKGRPGWHTECVVMIQDVFKKTLIDIHGGGLDLKFP 231

Query: 244 HHENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ   C D     ANIW+HNG +N+ G KMSKS GN     +L+     GG   
Sbjct: 232 HHENEIAQCEVCNDT--HLANIWVHNGMININGIKMSKSLGNVWWAKDLI--ANHGGN-- 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQTSTSKGII 347
              + R  M+ THYR P++   +    ++  L K                 Q +T+    
Sbjct: 286 ---LTRWLMISTHYRAPLNLNEEAFATSKKELDKIAAAYKQACVKLVLSSAQEATTFDET 342

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAR---ESTKNHD--------LLPIFNASAHILGIEV 396
             A + AL +DLNT +AI  +++L +   ++ +  +        L+       +ILGIE 
Sbjct: 343 YTAFIDALNDDLNTPNAISVVYELVKKINQAVRQREIDVENLAVLVHTLEKMLYILGIEF 402

Query: 397 CKEHLNKNISIAIE--KLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            K      +S+  E  ++ Q     +K K F +AD +R+ L  KG +
Sbjct: 403 DK------VSMTNEDKEMYQNWRSAVKEKDFKTADTLRQTLIEKGIL 443


>gi|294495735|ref|YP_003542228.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666734|gb|ADE36583.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 471

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 56/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F  +    + +Y CGPTVY+  HIGN R  ++ D L R+L Y     
Sbjct: 2   LRLYNTLTRKKEVFHPLKEEEVSIYACGPTVYNIPHIGNYRTFLMTDNLVRILEYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  +++   S+         T K T++F      L     +  PR
Sbjct: 60  TVNLVMNITDIDDKTIRDSKKAGMSL------KEFTEKYTEEFFCGLDMLNIQRASSYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT ++  MI L Q ++  G AYE +  + +  ++ P YG  S+   +  K+G  V  ++Y
Sbjct: 114 ATENVDGMIELAQTLMEKGLAYEKDGSVYYRIAAFPEYGKLSKLDFNSIKVGASVDVDEY 173

Query: 184 HKKNPADFILWKRST--PMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF+L K ST   +E G  +ESPWG+ RPGWH ECS MS ++ G   DIH GG+D
Sbjct: 174 DKDNPRDFVLLKASTQEEIERGIYYESPWGKIRPGWHTECSVMSMNHFGPSLDIHTGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +     WIH   L ++G KMSKS GN  T+ EL+E  K+GG
Sbjct: 234 LIFPHHENEIAQSEGATG-KPFVRYWIHGEHLIVDGEKMSKSKGNVFTLPELVE--KYGG 290

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------STS 343
                 V+R   +  HYR+ +DF+      A+    K  +T                 + 
Sbjct: 291 E-----VVRFMFMSVHYRKKLDFSDSFAQNAQNSYFKLRETLENLQFAIKGADDNEYPSD 345

Query: 344 KGIIDPA------VLSALYNDLNTVSAIQALHKLAR------ESTKNHD----LLPIFNA 387
           K +ID +        +AL +D+N   AI   H+L+R      ES +N D    LL ++  
Sbjct: 346 KEMIDLSGNLEDDFRNALEDDMNIPKAIAVYHELSRISNQYLESGRNKDVLEKLLSLYRK 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A  LGI   +E   + +   I +LV+ R    K + + +AD +R+++  +GF+++D   
Sbjct: 406 FADTLGI-FAQE--GEEVPEEIMELVKIREQARKDRDWDTADALREKIAQEGFVVQDTCE 462

Query: 448 PDNGQRMTR 456
             N +R  R
Sbjct: 463 GPNVKRQKR 471


>gi|87310876|ref|ZP_01093002.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286391|gb|EAQ78299.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 507

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 174/516 (33%), Positives = 248/516 (48%), Gaps = 93/516 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL +   EFQ + P  + +Y+CGPTVY  AHIG+    ++FD + R L Y   E 
Sbjct: 3   IRVYNTLSKTKEEFQTVTPGKVGIYLCGPTVYAEAHIGHMVGPVIFDTVKRYLVYSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITD+DDK+I++A +   S+        + ++N   ++ +   L        P+
Sbjct: 62  -VNLVVNITDVDDKLIKKATERGISM------EEVANENIADYLHNLAALGVDQIDQMPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +  +I ++  +I  G AY +  ++ F+ +  P YG  + R + E   G        
Sbjct: 115 ATETMDGIIAMVAELIEKGFAYASEGDVYFEVTKDPEYGKLTNRTV-EAMQGEGGEAASR 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++   EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDLIFPH
Sbjct: 174 KRSPGDFALWKKAKAGEPSWKSPWGDGRPGWHIECSAMSKAILGETFDIHGGGLDLIFPH 233

Query: 245 HENEIAQS-CCADRIEKTANIWIHNGFLNLE------------------GRKMSKSNGNF 285
           HENEIAQS CC    +     W+HNG L  +                  G KMS+S G  
Sbjct: 234 HENEIAQSECC--HAKPMVKYWMHNGLLRSDPAAGKIGGRAEREGAAEAGGKMSRSGGAG 291

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
             + +L+E ++ G R      IR  +L THYR  I F+ + + EA I L  +        
Sbjct: 292 -GLAKLIE-RQSGER------IRFFLLRTHYRSTILFSEEAIAEAGIGLDSFYRLFERYE 343

Query: 338 ----------PQTSTSK-GIIDP--------------AVLSALYNDLNTVSAIQALHKLA 372
                     P   T K G  +P              A L  + +D NT  A+  L ++A
Sbjct: 344 RLTGESFFDLPAAKTRKEGDFEPKKSELLVAIAKHRDAYLEKMDDDFNTGGAVSELFEMA 403

Query: 373 R-----------ESTKNHDLLPIFNASA------HILGIEVCKEHLNKN-----ISIAIE 410
           R           E  K+ DL  I  A +       ILGI V     + +     +   ++
Sbjct: 404 RLINKTIDQQKLEGDKSADLTNIKKAFSVLRELTGILGIFVTAPEKSSSGDSELVGQLMQ 463

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            L+  R    + K F  +D IR +L + G  LED K
Sbjct: 464 LLIDVRASARQKKDFEMSDVIRDRLTAMGVTLEDRK 499


>gi|238061386|ref|ZP_04606095.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883197|gb|EEP72025.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 471

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 169/478 (35%), Positives = 243/478 (50%), Gaps = 60/478 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + +F   +     +Y+CG T+    HIG+ R  + +DVL R L     E 
Sbjct: 3   LRLYDTATRSVRDFVPREAGKAGVYLCGLTLQGPPHIGHLRSGVNYDVLRRWLLARGFE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A ++            I   N +        L  L PT++PR
Sbjct: 62  -VRFIRNLTDIDDKILVKAVEQ------GRPFWSIAYANERALAAAYGMLNVLPPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT HIP+M  LI  +I  GHAY A +   ++ FD +S P YG+ S +  D  +     PE
Sbjct: 115 ATGHIPEMHELIARLIDTGHAYPATDGSGDVYFDVASWPAYGALSGQSPDAMQAADDAPE 174

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K +P DF LWK + P EP    W SPWGRGRPGWHIECSAM   YLG+ FDIHGGGL
Sbjct: 175 R-GKHDPRDFALWKGAKPNEPADAYWPSPWGRGRPGWHIECSAMCWRYLGEEFDIHGGGL 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A      A  W+H+G L + G KM KS GN +   +L      G
Sbjct: 234 DLTFPHHENEIAQSQAAGL--PFARYWVHHGLLGIGGAKMGKSLGNAL---DLTYIDSLG 288

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSK------GIID 348
            R    P+ +R      HYR  +D+T   L E      +   + Q +  +      G + 
Sbjct: 289 VR----PIELRYYYAAAHYRSHVDYTEDSLREWASGFRRIEGFVQRAAERVGPGELGELS 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARES----TKNHDL-----LPIFNASAHILGIEVCKE 399
              ++A+ +DLNT +A+  L ++ R+         D+     L    A   ILGI+   E
Sbjct: 345 AGFVAAMDDDLNTSAALAVLQEVLRDGNTALAAGDDVTVRTALGSTRAMLDILGIDPLDE 404

Query: 400 H-------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                         ++  +++A+E+  Q R      K + +AD +R QL+  G ++ED
Sbjct: 405 AWTGGGRADDLRGVVDSLVALALEQRAQAR----SRKDWVAADAVRDQLKLAGVVVED 458


>gi|332826849|gb|EGJ99649.1| cysteinyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 489

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 178/514 (34%), Positives = 266/514 (51%), Gaps = 79/514 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL R    F+ +   ++ MYVCGPTVY  AH+G+AR  + FD+L+R L++ 
Sbjct: 1   MEQKLSVYNTLTRTKEVFEPLHAPHVGMYVCGPTVYSDAHLGHARHGVTFDLLFRYLQHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +    + ++ K 
Sbjct: 61  -GYK-VRYVRNITDVGHLENEEGSGEDKISKKARLEQLE-PME-----VVQYYSNRYHKV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I  I+ I+ +G+AYE+N  + FD        +YG  S 
Sbjct: 113 MDDLNTLPPSIEPHASGHIIEQIESIKEILKNGYAYESNGSVYFDVEKYNKDYDYGILSH 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I+E    TR +  +  K +  DF LWK++ P     W SPW  G PGWH+ECS MS  
Sbjct: 173 RNIEEMLNTTRELDGQDEKHSKVDFALWKKAAPEHIMRWPSPWSDGFPGWHLECSTMSIK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLGK FDIHGGGLDL+FPHHE EIAQ+   ++  +    W+HN  + + G+KM++S GNF
Sbjct: 233 YLGKEFDIHGGGLDLMFPHHECEIAQNTAMEK-HQVVKYWMHNNMITIAGQKMARSLGNF 291

Query: 286 ITINELLETKKFGG------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           IT+ +L     F G      +++    +R  +L  HYR  +DF+ + L  AE  L +   
Sbjct: 292 ITLEQL-----FAGNHDLLEKAYSPMTVRFFILQAHYRSTVDFSNEALQAAEKSLERLLD 346

Query: 340 TSTSKGIIDPAVLS----------------ALYNDLNTV--------------SAIQALH 369
              S G +D   +S                A+ +D+N+               SAI    
Sbjct: 347 ---SYGRLDKVAISDTSSVDVKSIRQKCYDAMNDDMNSAVVIAHLCEASTTINSAIAGNI 403

Query: 370 KLARES-TKNHDLLPIFNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
           KL +E  T+  D+  IF  S  +LGI  E    + N+    A++ L+  R    + K ++
Sbjct: 404 KLTKEDITELKDVFDIFLFS--VLGIRNEASLTNNNEAFGKAVDLLLDIRQKAKENKDWA 461

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++D IR +L   GF ++D      G+    WK K
Sbjct: 462 TSDQIRNELAKAGFEIKD------GKDGAEWKLK 489


>gi|2181176|emb|CAA67901.1| cysteine tRNA synthetase [Azospirillum brasilense]
          Length = 448

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 178/475 (37%), Positives = 235/475 (49%), Gaps = 50/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ + P  + MYVCGPTVYD AHIGNARP +VFD+L+RLLR  Y   
Sbjct: 3   LDLYNTLTRRKERFEPMTPDRVGMYVCGPTVYDTAHIGNARP-VVFDLLFRLLRRLY--P 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNIT  DDKII+R          + A      +               APT +PR
Sbjct: 60  AVTYVRNITASDDKIIDRRATTGADRGADQAHRGPLPRRHGPLNA--------APTIEPR 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  M+ LI  +I                    + G  SRR +DE   G RV    +
Sbjct: 112 ATHHISHMVALIGLLIEPATPTPRKGTCCSPCRRWRSTGQLSRRSLDEMIAGARVEVAPY 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++ +DF+LWK ST  +PGW+SPWGRGRPGWHIECSAM+  +LG  FDIHGGGLDLI P 
Sbjct: 172 KRDSSDFVLWKPSTDGQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLILPD 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN-GNFITINELLETKKFGGRSWP 303
           HENEIAQS CA    +       NGF+ +EGR+   S    F T      T+  GG    
Sbjct: 232 HENEIAQSRCAHAGSRWPATGSTNGFVTVEGREGCPSRWATFFTGGTSCWTEFPGGGH-- 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------VLSALY 356
                  + +  YR      +    E++  L +W Q    +G   PA       VL+AL 
Sbjct: 290 ------PLGVRPYRS---RGLPEAEESKATLDRWYQ--ALRGDPAPAQAELPFDVLAALE 338

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI----------- 405
           +DLN+  AI  LH+LA    K         A       E       +++           
Sbjct: 339 DDLNSPLAISHLHELASAVNKATGEAEKAAAKGRCRSAERWAAPETRSVVPLGAEGAAAL 398

Query: 406 -SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               I++ +++R    K K ++ AD IRK+L   G +LED      G + T WK+
Sbjct: 399 SDADIQQRIEDRSAARKAKNYAEADRIRKELADLGIVLED------GPQGTTWKR 447


>gi|3122878|sp|O07045|SYC_AZOBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 448

 Score =  259 bits (663), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 180/475 (37%), Positives = 236/475 (49%), Gaps = 50/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ + P  + MYVCGPTVYD AHIGNARP +VFD+L+RLLR  Y   
Sbjct: 3   LDLYNTLTRRKERFEPMTPDRVGMYVCGPTVYDTAHIGNARP-VVFDLLFRLLRRLY--P 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNIT  DDKII+R          + A      +               APT +PR
Sbjct: 60  AVTYVRNITASDDKIIDRRATTGADRGADQAHRGPLPRRHGPLNA--------APTIEPR 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  M+ LI  +I                    + G  SRR +DE   G RV    +
Sbjct: 112 ATHHISHMVALIGLLIEPATPTPRKGTCCSPCRRWRSTGQLSRRSLDEMIAGARVEVAPY 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++ +DF+LWK ST  +PGW+SPWGRGRPGWHIECSAM+  +LG  FDIHGGGLDLI P 
Sbjct: 172 KRDSSDFVLWKPSTDGQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLILPD 231

Query: 245 HENEIAQSCCADRIEKTANIWIHN-GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQS CA   E  A  W+H         R+MSKS GN +       T+  GG    
Sbjct: 232 HENEIAQSRCAHAGEPLARYWVHQRLRDRRGARRMSKSLGNLLHRGTSCWTEFPGGGH-- 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------VLSALY 356
                  + +  YR      +    E++  L +W Q    +G   PA       VL+AL 
Sbjct: 290 ------PLGVRPYRS---RGLPEAEESKATLDRWYQ--ALRGDPAPAQAELPFDVLAALE 338

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI----------- 405
           +DLN+  AI  LH+LA    K         A       E       +++           
Sbjct: 339 DDLNSPLAISHLHELASAVNKATGEAEKAAAKGRCRSAERWAAPETRSVVPLGAEGAAAL 398

Query: 406 -SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               I++ +++R    K K ++ AD IRK+L   G +LED      G + T WK+
Sbjct: 399 SDADIQQRIEDRSAARKAKNYAEADRIRKELADLGIVLED------GPQGTTWKR 447


>gi|118619335|ref|YP_907667.1| cysteinyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|166225300|sp|A0PV27|SYC_MYCUA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118571445|gb|ABL06196.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium ulcerans Agy99]
          Length = 468

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 156/474 (32%), Positives = 242/474 (51%), Gaps = 48/474 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RAGLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQ-EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            +  V ++RN+TDIDDKI+ +A   E P            +   + F      L  L P+
Sbjct: 64  FD--VAFIRNVTDIDDKILNKAAAAERPWWEW-------AATYERAFTAAYDALDVLPPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT H+ QM+ LI+ +I  GHAY    ++ FD  S P+YG  S  K+D+   G  V 
Sbjct: 115 AEPRATGHVTQMVELIERLIERGHAYAGGGDVYFDVLSYPDYGQLSGHKVDDVHQGEGVA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL
Sbjct: 175 TG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAQFDIHCGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  +L+  +    
Sbjct: 233 IFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLAIPTMLQRVR---- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK------GIIDPAV 351
             PA  +R  +   HYR  ++F+   +Q    A + + ++     S+      G   P  
Sbjct: 287 --PAE-LRYYLGSAHYRSILEFSDIALQDAVNAYVGVEEFLHRVRSRVGAVVVGDWTPRF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTK-----NHDL----LPIFNASAHILGIEVCKEHLN 402
            +AL +DL+   A+  +H +  E  +     +HD          A   ILG +   E   
Sbjct: 344 AAALDDDLSVPIALAEIHHIRAEGNRALDAGDHDAALQSASSIRALMGILGCDPLDERWE 403

Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                      + + ++  ++ R    + + ++ AD IR +L++ G  + D  +
Sbjct: 404 SRDETSAALAAVDVLVQAELENRQKAREERNWALADEIRNRLKNAGIEVTDTAD 457


>gi|323343623|ref|ZP_08083850.1| cysteine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095442|gb|EFZ38016.1| cysteine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 496

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 178/497 (35%), Positives = 253/497 (50%), Gaps = 59/497 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQRLVIYNTLSRKKEVFKPLHAPNVGMYVCGPTVYGAPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I       +   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYANSYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +PRAT HI +   L+  I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPRATGHIIEQEELVNEILKNGYAYESNGSIYFDIEKYNRKHRYGILSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  E   +K N ADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINNSRALEGVEEKHNQADFALWKKAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+ +  + T +   +++    IR  +L  HYR  +DF+            RL      +
Sbjct: 292 ITLEQFFKGTHESLSQAYSPMTIRFFILSAHYRGTVDFSNEALIASAKGFDRLMTGIADI 351

Query: 335 SKWPQTSTSK-------GIIDPAVLSALYNDLNTVSAIQAL------------HKLARES 375
           ++ P +S S        G +      A+ +DL T + I  L            HK    +
Sbjct: 352 ARVPVSSESDEAVKQFVGELRQKCYDAMNDDLQTPTVISNLFEACHVINSLLDHKARISA 411

Query: 376 TKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILL----KMKKFSSADY 430
           T   DL    +  A  ILG++  K   N     +  K+V   L L     + K ++++D 
Sbjct: 412 TDLADLADTMHLFALDILGLKSEKGINNDAREASYGKVVDMVLALRAKAKQNKDWTTSDQ 471

Query: 431 IRKQLESKGFILEDYKN 447
           IR  L   GF ++D K+
Sbjct: 472 IRDALAEAGFEVKDTKD 488


>gi|307298183|ref|ZP_07577987.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916269|gb|EFN46652.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 462

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 167/471 (35%), Positives = 252/471 (53%), Gaps = 44/471 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT+ R+   F+ +    + +Y CG TVY+FAHIGN R  +  D L R+  + +  
Sbjct: 2   EIRLTNTMSRRKEIFKPLKIGEVGIYTCGLTVYNFAHIGNLRAYVFADTLKRM--FLFNG 59

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V +V NITD+          +DK+   AR+E  ++        I    T+ F KD  R
Sbjct: 60  YKVRHVMNITDVGHLTGDEDEGEDKMEAGARREGKTV------WEIVDFYTKAFFKDLER 113

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L  + PT   RAT H+  MI +IQ I  +G+ Y A   + FDTS +P+YG  +R ++DE+
Sbjct: 114 LRIILPTVTCRATEHVQDMIDMIQKIEANGYTYIAGGNVYFDTSKVPDYGKLARLQLDEE 173

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           K+ +RV     KKNP DF+LW      E     W+SPWGRG PGWHIECSAM+S YLG+ 
Sbjct: 174 KIRSRVENDPFKKNPFDFVLWFTRYKYENHAMQWDSPWGRGFPGWHIECSAMASKYLGER 233

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITIN 289
           FDIH GG+D I  HH NEIAQS  A   E   N W+H+ FL + EG KMSKS GNFIT+ 
Sbjct: 234 FDIHTGGIDHIPVHHTNEIAQSEAAFGHE-WVNFWLHSEFLVIGEGEKMSKSLGNFITLQ 292

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------ 337
            L++      R +     R  +L  HY++ + FT++ L  A+  + K             
Sbjct: 293 TLID------RGYEPADYRYYLLGAHYKKQLTFTMEALDGAKSAMKKLITRIEELKELNE 346

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEV 396
            +T  +  +++     A+ +DLNT  A+  L K+   E  +  + L + +    +LG+ +
Sbjct: 347 SETRPNDDLMNE-FHEAINDDLNTPKALAVLWKVVDSEDLRPGEKLSLIDRFDEVLGLGL 405

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  +K I   + +L  +R    K + +  AD +R+ +  KG+ + D ++
Sbjct: 406 S-EVESKTIPEEVIELANQRDAARKERNWEKADELRQLISEKGYEVLDERD 455


>gi|304383413|ref|ZP_07365879.1| cysteine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335581|gb|EFM01845.1| cysteine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 499

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 179/499 (35%), Positives = 254/499 (50%), Gaps = 63/499 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ +YNTL RK  EF  +   N+ MYVCGPTVY   H+G+ARP I FDVL+R LR+ 
Sbjct: 4   MQQRLFVYNTLTRKKEEFVPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVLFRYLRHI 63

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I    T ++   
Sbjct: 64  -GYK-VRYVRNITDVGHLEHDADDGDDKITKKARLEQLE-PME-----IAQLYTNRYHDA 115

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE++  I FD         YG  S 
Sbjct: 116 MRALNVLPPSIEPHATGHIIEQEELVKQIMSNGYAYESHGSIYFDIEKYNKDHRYGILSG 175

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  +   +K N  DF LWKR+ P     W SPWG G PGWH EC+AM   
Sbjct: 176 RNLDDVINNSRELDGVGEKHNQVDFALWKRAHPEHIMRWPSPWGDGFPGWHCECTAMGRK 235

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + ++G+KM KS GNF
Sbjct: 236 YLGNHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITVDGKKMGKSLGNF 294

Query: 286 ITINE-LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +  + T     +++    IR  +L  HYR  +DF+   L  +E  L +        
Sbjct: 295 ITLEQFFIGTHPLLKQAFSPMTIRFFILSAHYRGTVDFSNDALAASEKGLERLMNGLDDL 354

Query: 345 GIIDPA-----------------VLSALYNDLNTVSAIQALHKLAR--ESTKNH------ 379
             I PA                    AL +DL T + I  L +  R   +  +H      
Sbjct: 355 DRIQPAPSTDETTAQTVATLRKRCYDALNDDLQTPTVISHLFEACRIINTVLDHKGSINA 414

Query: 380 -------DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSA 428
                  D + +F  +  +LG++  K   N     A  K+V   L L       K +S++
Sbjct: 415 ADLQELKDTMHLF--AFDLLGLKSEKNANNDAREAAYGKVVDMVLDLRAKAKADKDWSTS 472

Query: 429 DYIRKQLESKGFILEDYKN 447
           D IR +L   GF ++D K+
Sbjct: 473 DRIRDELAKDGFEVKDTKD 491


>gi|320533525|ref|ZP_08034187.1| cysteinyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134258|gb|EFW26544.1| cysteinyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 498

 Score =  259 bits (662), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 140/345 (40%), Positives = 201/345 (58%), Gaps = 31/345 (8%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y++  R I        P  + +Y+CG TV    HIG+ R  I FDVL R L     E
Sbjct: 28  LRLYDSAARAIVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLERSGQE 87

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  +RN+TDIDDKI+ ++    P +P          +  ++F      L   APT++P
Sbjct: 88  --VRLIRNVTDIDDKILSKSAAAEPPVPW----WAWAQRFEREFDAAYRALGVAAPTYEP 141

Query: 124 RATNHIPQMIYLIQNIILHGHAY--EANNEIIFDTSSIPNYGSFSRRKI-------DEQK 174
           RAT HIP+MI L+Q ++  GHAY  E+ N + +D  S+P+YGS + +++       DE +
Sbjct: 142 RATGHIPEMIDLVQRLLDAGHAYIGESGN-VYYDVRSLPDYGSLTNQRLEDLATTEDESQ 200

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
           +   V  +  K++P DF LWK + P EP    W +PWGRGRPGWH+ECSAMS  YLG+ F
Sbjct: 201 LDDDV--EADKRDPRDFALWKAAKPTEPADAAWGAPWGRGRPGWHLECSAMSRRYLGETF 258

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + + EL
Sbjct: 259 DIHGGGIDLRFPHHENEQAQSHGAGW--GFARHWVHNAWVTIKGEKMSKSLGNSLVVAEL 316

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           L       + + A V+RLA+   H+R  ++F+ + L +A  L  +
Sbjct: 317 L-------KRYDAAVLRLALGTVHHRSTVEFSDETLADAAALWER 354


>gi|38234535|ref|NP_940302.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|61216541|sp|Q6NFC3|SYC_CORDI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|38200798|emb|CAE50502.1| Putative cysteinyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 463

 Score =  259 bits (662), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 159/478 (33%), Positives = 243/478 (50%), Gaps = 56/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + +F+ I P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 3   LRIFDTGTRSLRDFEPIRPGHASIYLCGATPQTQPHIGHVRSGVAFDILRRWLIAQGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +     P  + +S       ++F     +L  L P+ +PR
Sbjct: 62  -VAFVRNVTDIDDKILTKAAEN--GRPWWEWVSTYE----REFTWAYNQLGVLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRV 179
           AT H+ QM+  +Q +I +G AY A   + FD ++       +YGS S  +++E + G   
Sbjct: 115 ATGHVTQMVEYMQRLIDNGFAYAAEGSVYFDVAAWTAAEGSDYGSLSGNRVEEMEQGET- 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K+   DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIH GGLD
Sbjct: 174 -EITGKRGAHDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATWYLGGEFDIHCGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A   +  AN W+HN ++ + G KMSKS GN +++  +L+  +   
Sbjct: 233 LQFPHHENEIAQSHAAG--DGFANYWMHNHWVTMSGEKMSKSLGNVLSVPNILDKVR--- 287

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAV 351
                PV +R  +   HYR  ++++   L EA       E  L+K        G      
Sbjct: 288 -----PVELRYYLGSAHYRSMLEYSEGALLEAAAGYRRIEAFLTK--VADVEAGQWTTEF 340

Query: 352 LSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKE--- 399
             A+ +DL    A+  +H   R            K H++     A A +LG++   E   
Sbjct: 341 EEAMNDDLAVPRALAEIHTQVRHGNSALAAGDVDKAHEIAASVRAMAAVLGVDPLDEKWL 400

Query: 400 -------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                    N  + + ++  +Q R      K +++AD +R +L + G  + D   PD 
Sbjct: 401 DSAASDSSTNAALDVLVQAELQRRTEARAAKDWATADEVRDRLHAAGITVTD--TPDG 456


>gi|256371123|ref|YP_003108947.1| cysteinyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007707|gb|ACU53274.1| cysteinyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 446

 Score =  259 bits (662), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 157/458 (34%), Positives = 232/458 (50%), Gaps = 35/458 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R++ +     P  + +YVCGPTVYD  H+G+ R  +VFD L R L       
Sbjct: 2   LRLYDTARRELIQLTPGTPEQVTVYVCGPTVYDDPHLGHGRLAVVFDTLRRTLERLVAP- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITDIDDKI++RA +E  + P       I  +   ++      L    PT  P 
Sbjct: 61  -VRFVSNITDIDDKIVDRAAREGVTPPA------IAERYESRWWDAIDALGVRRPTVAPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A+  +  M+ LI+ ++  GHAY   N +      +P+YG    + ++E + G RV     
Sbjct: 114 ASEWLDAMVALIERLVDRGHAYMTKNGVYLSVDHVPDYGLLKHQALEELRAGARVEVDDA 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK       G+ +  G GRPGWH EC AMS+  LG  FD+HGGG+DL+FPH
Sbjct: 174 KRSPLDFALWKTVESDAYGFATSLGYGRPGWHTECVAMSTELLGSTFDLHGGGMDLVFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+   D     A  W+HN F+ LEG KMSKS GN   +++ + +   GGR    
Sbjct: 234 HENERAQASLLDM--GFAQHWVHNAFVELEGEKMSKSLGNTFGLHDAIASA--GGR---- 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--IIDPAVL----SALYND 358
            V+RLA L  HYR P++ T   L +A   L++    + +      +PA L    +AL +D
Sbjct: 286 -VVRLAYLRAHYRSPVELTTTTLEQAAAQLARLDSQAGAGDARAAEPADLEEFDAALADD 344

Query: 359 LNT---------VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
           L+T          +       LA ES   +       A    LG+ V       +I   +
Sbjct: 345 LDTPAALAVMAEAARAARSAALAGESALANRRRAALAAMLETLGLPVPP---RASIPSEV 401

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             LV ER    + + F+ AD +R ++ + G+ + D  N
Sbjct: 402 TALVAERDHAKRDRDFARADALRAEIAALGYQVRDTPN 439


>gi|183985048|ref|YP_001853339.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium marinum M]
 gi|229558716|sp|B2HJ21|SYC_MYCMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183178374|gb|ACC43484.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium marinum M]
          Length = 468

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 243/474 (51%), Gaps = 48/474 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RAGLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQ-EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            +  V ++RN+TDIDDKI+ +A   E P            +   + F      L  L P+
Sbjct: 64  FD--VAFIRNVTDIDDKILNKAAAAERPWWEW-------AATYERAFTAAYDALDVLPPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT H+ QM+ LI+ +I  GHAY    ++ FD  S P+YG  S  K+D+   G  V 
Sbjct: 115 AEPRATGHVTQMVELIERLIERGHAYAGGGDVYFDVLSYPDYGQLSGHKVDDVHQGEGVA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL
Sbjct: 175 TG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAQFDIHCGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  +L+      R
Sbjct: 233 IFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLAIPTMLQ------R 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK-GII-----DPAV 351
             PA  +R  +   HYR  ++F+   +Q    A + + ++     S+ G++      P  
Sbjct: 285 VRPAE-LRYYLGSAHYRSMLEFSDIALQDAVNAYVGVEEFLHRVRSRAGVVVVGDWTPRF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTK-----NHDL----LPIFNASAHILGIEVCKEHLN 402
            +AL +DL+   A+  +H    E  +     +HD          A   ILG +   E   
Sbjct: 344 AAALDDDLSVPIALAEIHHTRAEGNRALDAGDHDAALQSASSIRAMMGILGCDPLDERWE 403

Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                      + + ++  ++ R    + + ++ AD IR +L++ G  + D  +
Sbjct: 404 SRDETSAALAAVDVLVQAELENRQKAREERNWALADEIRNRLKNAGIEVTDTAD 457


>gi|25029072|ref|NP_739126.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259505936|ref|ZP_05748838.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|23494359|dbj|BAC19326.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166417|gb|EEW50971.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 479

 Score =  259 bits (661), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 158/469 (33%), Positives = 241/469 (51%), Gaps = 51/469 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + EF  + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 23  LRIFDTATRTLREFIPLKPGHASVYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGLD- 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A  EH   P  + +S       ++F      L  L P+ +PR
Sbjct: 82  -VAFVRNVTDIDDKILTKA-AEH-GRPWWEWVSTYE----REFTWAYNTLGVLPPSVEPR 134

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRV 179
           AT H+ QM+  +Q +I +G AYE N  + FD ++       +YGS S  ++++ + G   
Sbjct: 135 ATGHVTQMVQYMQRLIDNGFAYEVNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQGE-- 192

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            + + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIH GGLD
Sbjct: 193 TDNFGKRGPQDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATYYLGAEFDIHCGGLD 252

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQ+  A   +  A  W+HN ++ + G KMSKS GN +++  +LE  +   
Sbjct: 253 LQFPHHENEIAQAHAAG--DGFARYWMHNHWVTMAGEKMSKSLGNVLSVPNMLEKVR--- 307

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAV 351
                PV +R  +   HYR  ++++   LTEA       E  + +  +     G      
Sbjct: 308 -----PVELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEAFVDRVGEVEV--GTWTAGF 360

Query: 352 LSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLN 402
            +A+  DL    A+  +H   RE           K  +L     A   +LG +  +    
Sbjct: 361 EAAMDEDLAVPKALAEIHNAVREGNSALAAGEMEKARELAGAVRAMTGVLGFDPVEWGTQ 420

Query: 403 KNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + S A E L       ++ R      K ++ AD +R +L + G  + D
Sbjct: 421 TDDSAAHEALEVLVHAELERRATARAEKDWAVADEVRDRLAAAGIEVVD 469


>gi|30316165|sp|Q8FMI8|SYC_COREF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 459

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 158/469 (33%), Positives = 241/469 (51%), Gaps = 51/469 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + EF  + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 3   LRIFDTATRTLREFIPLKPGHASVYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A  EH   P  + +S       ++F      L  L P+ +PR
Sbjct: 62  -VAFVRNVTDIDDKILTKA-AEH-GRPWWEWVSTYE----REFTWAYNTLGVLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRV 179
           AT H+ QM+  +Q +I +G AYE N  + FD ++       +YGS S  ++++ + G   
Sbjct: 115 ATGHVTQMVQYMQRLIDNGFAYEVNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQGE-- 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            + + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIH GGLD
Sbjct: 173 TDNFGKRGPQDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATYYLGAEFDIHCGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQ+  A   +  A  W+HN ++ + G KMSKS GN +++  +LE  +   
Sbjct: 233 LQFPHHENEIAQAHAAG--DGFARYWMHNHWVTMAGEKMSKSLGNVLSVPNMLEKVR--- 287

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAV 351
                PV +R  +   HYR  ++++   LTEA       E  + +  +     G      
Sbjct: 288 -----PVELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEAFVDRVGEVEV--GTWTAGF 340

Query: 352 LSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLN 402
            +A+  DL    A+  +H   RE           K  +L     A   +LG +  +    
Sbjct: 341 EAAMDEDLAVPKALAEIHNAVREGNSALAAGEMEKARELAGAVRAMTGVLGFDPVEWGTQ 400

Query: 403 KNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + S A E L       ++ R      K ++ AD +R +L + G  + D
Sbjct: 401 TDDSAAHEALEVLVHAELERRATARAEKDWAVADEVRDRLAAAGIEVVD 449


>gi|315605246|ref|ZP_07880292.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313063|gb|EFU61134.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 486

 Score =  259 bits (661), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 159/496 (32%), Positives = 240/496 (48%), Gaps = 66/496 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +Y++   +I     + P  + +Y+CG TV    H+G+ R  + FD L R LR  
Sbjct: 1   MSTMLHLYDSKSARIQPLNPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  VTYVRN+TDIDDKI+ ++ +                +  ++F +    L   APT
Sbjct: 61  GYE--VTYVRNVTDIDDKILTKSAESGWDW------WAWAYRFEREFTQAYDTLGVQAPT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKM---G 176
           ++PRAT HIP  I L+  +I  GHAY +    + FD  S  +YGS +R+++ + +     
Sbjct: 113 YEPRATGHIPDQIDLVSRLIDAGHAYSDGRGNVYFDVHSQADYGSLTRQRLADMRTTEDD 172

Query: 177 TRVPEKYH--KKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            ++ E     K++P DF LWK + P EP    WESPWGRGRPGWH+ECSAMS  YLG  F
Sbjct: 173 AQIDEAVEAGKRDPRDFALWKATKPGEPDTASWESPWGRGRPGWHLECSAMSRRYLGDEF 232

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHENE AQS  A      A +W+HN ++  +G KMSKS GN ++I  L
Sbjct: 233 DIHGGGIDLRFPHHENEQAQSHGAGW--AFARLWVHNAWVTTKGEKMSKSLGNVLSIGAL 290

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------- 338
            E         PA  +R A+   H+R  I++    L  A     K+              
Sbjct: 291 TEEH-------PAVAVRWALSTVHHRSAIEWGPDTLPAAHAAWEKFSSFVARAIEAVGEA 343

Query: 339 ---QTSTSKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASA--- 389
              + +   G +  A ++A+ +DLN   A+  LH   K    +    D   I+       
Sbjct: 344 GADEIALGPGDLPEAFVAAMDDDLNVAGALAVLHEHLKAGNAALAAGDADGIYREQVLVR 403

Query: 390 ---HILGIEVCKEHL---------------NKNISIAIEKLVQERLILLKMKKFSSADYI 431
               +LG++   +                 +  +   +  +++ER      K +  AD +
Sbjct: 404 SMLDVLGLDPASQQWRGQAGIDAGGAAAGEHSALDALVGAVLEERAQARAAKDWGRADEL 463

Query: 432 RKQLESKGFILEDYKN 447
           R +L + G  + D ++
Sbjct: 464 RDRLAAAGVSVADGRD 479


>gi|162139903|ref|YP_716650.2| cysteinyl-tRNA synthetase [Frankia alni ACN14a]
          Length = 513

 Score =  259 bits (661), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 140/332 (42%), Positives = 190/332 (57%), Gaps = 23/332 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R L     E 
Sbjct: 3   LHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQSPPHVGHLRTALPFDLLRRWL--VQSEH 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT V+N+TDIDDKII  A ++  S+        + ++ T+ F      +  L PT QPR
Sbjct: 61  EVTLVQNVTDIDDKIIVNADRDGTSV------WELATRQTRAFDDAYRTIGILPPTIQPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+MI LI  +I  GHAY     + F   S P YG+ S ++ D   M      +  
Sbjct: 115 ATGHIPEMIALISALIAGGHAYAGAGSVWFRVGSFPGYGALSHQRPD--SMLPSAESEPG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+FPH
Sbjct: 173 KADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVFPH 232

Query: 245 HENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           HENE AQ+ C          E+ A  W+H G L   G KMSKS GN + + + LE  +  
Sbjct: 233 HENERAQTVCAAGGAAGAGAEEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALEAVR-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
                  V+R  +L  HYR  +++T + L E+
Sbjct: 291 -----PQVLRYHLLSAHYRSTLEYTPEALGES 317


>gi|329943176|ref|ZP_08291950.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848330|emb|CBY17333.1| putative cysteinyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|328814723|gb|EGF84713.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915014|gb|AEB55847.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 476

 Score =  259 bits (661), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 168/482 (34%), Positives = 253/482 (52%), Gaps = 56/482 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           ++ + +YNT  R    F    PSN  +R+Y CGPTVYD+AHIGN R  +  D+L R L +
Sbjct: 8   RQNLYLYNTASRTKELFS---PSNDPVRLYTCGPTVYDYAHIGNFRTYVFEDLLKRTLLF 64

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           +     V +V NITD+DDK +  A ++      N ++   T+   Q F +D   L  L  
Sbjct: 65  F--GYSVKHVMNITDVDDKTLAGACKK------NISLDTYTAPFIQAFFEDVATLNILPA 116

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
              PRAT++IPQM+  I+ ++  G AY   +N + F   + P+YG  S+ ++   +  +R
Sbjct: 117 DTYPRATHYIPQMLEAIRKLLDDGIAYTGQDNSVYFSIKAFPSYGKLSQLQLQNLQCCSR 176

Query: 179 VP-EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           V  ++Y K+N +DF+LWK       G   WESP+G+GRPGWH+ECS M+   LG   DIH
Sbjct: 177 VASDEYDKENLSDFVLWKAYDKKRDGHIYWESPFGKGRPGWHLECSIMAMELLGSSIDIH 236

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+ 
Sbjct: 237 AGGVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD- 294

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-----------SKWPQTSTS 343
                R +    IR  +L +HYR  ++FT + L      L           S +P+++T 
Sbjct: 295 -----RGFSGEEIRYMLLQSHYRMQLNFTEEGLIACRQALKRLRDFISRLESPYPESATI 349

Query: 344 KGIIDPA-------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF 385
              ID           +A+ NDLN  +A+ +L     ++    D           +L I 
Sbjct: 350 SEDIDRCGQLFLQDFSNAIANDLNIATALASLFDFIHQTNSLIDKSNFTQADSNYVLDIM 409

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                +LG+      L   I   + +LV+ER +  K K +  AD +R Q+ S G+++ED 
Sbjct: 410 KKIDTVLGVIPFTTSL--EIPSEVAQLVEEREVARKEKNWKQADVLRNQIASLGYVIEDT 467

Query: 446 KN 447
           K+
Sbjct: 468 KS 469


>gi|269957728|ref|YP_003327517.1| cysteinyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306409|gb|ACZ31959.1| cysteinyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 480

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 171/497 (34%), Positives = 252/497 (50%), Gaps = 66/497 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYG 62
            +++Y+T  R +++F    P  + +YVCG TV    H+G+ RP + FDVL R L R  Y 
Sbjct: 2   SLRLYDTATRTVSDFVPRTPGQVGIYVCGATVQSSPHVGHLRPSVAFDVLRRWLTRNGY- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT VRNITDIDDKI+ +A         + A      +  ++F      L  L PT++
Sbjct: 61  --QVTLVRNITDIDDKILAKAAAAGVEWWAHAA------RYEREFTAAYDALGVLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDE-----QKMG 176
           PRAT H+ QM+ L++ ++  GHAY      + FD  S P YG  +R+++++     Q   
Sbjct: 113 PRATQHVTQMVELMERLVERGHAYTTGEGNVWFDVRSWPAYGELTRQRLEDLAPEPQSSD 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 + K+N  DF LWK   P EP    W +PWG GRPGWH+ECSAM+  YLG  FDI
Sbjct: 173 DVAYPGHAKRNVHDFALWKAPKPGEPATAAWPTPWGPGRPGWHLECSAMAQRYLGDEFDI 232

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHENE AQS  A      A  W+H  ++   G KMSKS GN + ++ELL+
Sbjct: 233 HGGGLDLRFPHHENEQAQSRAAGF--GFARRWLHAAWITQSGVKMSKSLGNGLLVSELLK 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWPQTSTSK-GIIDP 349
           T        PAPV+R A++   YR  +++    L EA      L  + + +T + G +D 
Sbjct: 291 TT-------PAPVVRYAIVAVQYRSMLEWAPDTLAEATTTWDRLCGFVERATERVGAVDA 343

Query: 350 ----------AVLSALYNDLNTVSAIQALHK------LARESTKNHDL-----LPIFNAS 388
                       ++AL +DLN  +A+  +H+       A  ++  +D      L      
Sbjct: 344 DEIAKAELPVGFVAALDDDLNVPAALAVVHEHLRAGNTALAASAGNDAAVRAELVAVRGM 403

Query: 389 AHILGIEVCKEHLNKNISI------AIEKLVQ----ERLILLKMKKFSSADYIRKQLESK 438
             +LG++       +  +       A++ LVQ     R      K ++++D IR +L   
Sbjct: 404 LDVLGLDPADPQWARTDAASSSTRHALDALVQAELEARAAARAAKDWAASDAIRDRLAGA 463

Query: 439 GFILEDYKNPDNGQRMT 455
           G +++D   PD G R T
Sbjct: 464 GILVQD--GPD-GARWT 477


>gi|315446220|ref|YP_004079099.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315264523|gb|ADU01265.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 475

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/474 (33%), Positives = 233/474 (49%), Gaps = 50/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL   + +F  + P ++ +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 9   MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A       P  +      +   + F      L  L P+ +PR
Sbjct: 68  -VAFIRNVTDIDDKILIKAAD--AGRPWWE----WAATYERAFTAAYDALGVLPPSAEPR 120

Query: 125 ATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           AT HI QM+ LI  +I  GHAY    E N ++ F  S++P+YG  S  +ID+   G  V 
Sbjct: 121 ATGHITQMVELIDRLIERGHAYCADQEGNGDVYFSVSTLPDYGKLSGHRIDDVHQGEGVA 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL
Sbjct: 181 TG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDL 238

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN + I  +L+  +    
Sbjct: 239 VFPHHENEIAQAEAAG--DGFARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVR---- 292

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAV 351
              A  +R  +   HYR  ++F+   L +A    S              +   G   P  
Sbjct: 293 ---AAELRYYLGSAHYRSMLEFSENALQDAARAYSGVEDFLHRVRVRVGAVVPGEWTPKF 349

Query: 352 LSALYNDLNTVSAIQALHKLARESTK-----NHDLLPI----FNASAHILGIEVCKEHLN 402
            +AL +DL   +A+  +H    E  +     +HD          A   ILG +   E   
Sbjct: 350 GAALDDDLAVPAALAEVHAARAEGNRALDAGDHDAALTHAMSIRAMMGILGADPLDERWE 409

Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                      + + +   V+ R      + ++ AD IR +L+  G  + D  +
Sbjct: 410 SRDETSAALAAVDVLVHAEVRRREDARARRDWAEADAIRDRLKEAGIEVTDTGD 463


>gi|145222038|ref|YP_001132716.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|187631640|sp|A4T5K9|SYC_MYCGI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145214524|gb|ABP43928.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 467

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/471 (33%), Positives = 232/471 (49%), Gaps = 50/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL   + +F  + P ++ +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 1   MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A       P  +      +   + F      L  L P+ +PR
Sbjct: 60  -VAFIRNVTDIDDKILIKAAD--AGRPWWE----WAATYERAFTAAYDALGVLPPSAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           AT HI QM+ LI  +I  GHAY    E N ++ F  S++P YG  S  +ID+   G  V 
Sbjct: 113 ATGHITQMVELIDRLIERGHAYCADQEGNGDVYFSVSTLPEYGKLSGHRIDDVHQGEGVA 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL
Sbjct: 173 TG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDL 230

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN + I  +L+  +    
Sbjct: 231 VFPHHENEIAQAEAAG--DGFARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVR---- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAV 351
              A  +R  +   HYR  ++F+   L +A    S              +   G   P  
Sbjct: 285 ---AAELRYYLGSAHYRSMLEFSENALQDAARAYSGVEDFLHRVRVRVGAVVPGEWTPKF 341

Query: 352 LSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIF----NASAHILGIEVCKEHLN 402
            +AL +DL   +A+  +H    E  +     +HD    +     A   ILG +   E   
Sbjct: 342 GAALDDDLAVPAALAEVHAARAEGNRALDAGDHDAALTYAMSIRAMMGILGADPLDERWE 401

Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      + + +   V+ R      + ++ AD IR +L+  G  + D
Sbjct: 402 SRDKTSAALAAVDVLVHAEVRRREDARARRDWAEADAIRDRLKEAGIEVTD 452


>gi|332300111|ref|YP_004442032.1| cysteinyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177174|gb|AEE12864.1| cysteinyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 492

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 258/493 (52%), Gaps = 59/493 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ IYNTLER    F+ I P ++ +YVCGPTVY   H+G+AR  I FD+L+R L++  G 
Sbjct: 3   QLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHL-GY 61

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           K V YVRN+TD+          +DKI ++A+ E    P+  A   +T  +      D+ R
Sbjct: 62  K-VRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLE-PMEVAYYYLTRYH------DSLR 113

Query: 114 LA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
           L   L P+ +P A+ HI + I L+Q I+  G+AY +   + FD     +   YG  S R 
Sbjct: 114 LLNVLPPSIEPLASGHIIEQIALVQQILDAGYAYVSQGSVYFDVLKYHADHPYGILSGRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  K NP DF LWK++ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 VEDMISNTRELDGQDEKHNPLDFALWKKAQPNHIMRWPSPWSEGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGGLDL FPHHE EIAQ+  A + E     W+HN  + ++G+KM+KS GNFIT
Sbjct: 234 GAHFDIHGGGLDLTFPHHECEIAQA-VASQGEPMVKYWMHNNMITVDGKKMAKSAGNFIT 292

Query: 288 INELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEI-LLS 335
           + E             AP+ IR  +L  HYR  +DF+           QRL +A+  L S
Sbjct: 293 LEEFFTGDHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQS 352

Query: 336 KWPQTSTSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTKNHD------------L 381
             P  +++   ID A     A+ +D+NT   I AL   AR     HD            L
Sbjct: 353 LKPSATSTIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGHEQITSEQLEEL 412

Query: 382 LPIFNASAH-ILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
              ++   H ILG++   E  +      +  + A++ L++ R      K + ++D IR +
Sbjct: 413 RRAYDLYLHDILGMQSATETADLSGSQQEAFAGAMDLLLEIRAKAKASKDWETSDLIRDK 472

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 473 LTALGFEIQDTKS 485


>gi|154490024|ref|ZP_02030285.1| hypothetical protein PARMER_00253 [Parabacteroides merdae ATCC
           43184]
 gi|154089466|gb|EDN88510.1| hypothetical protein PARMER_00253 [Parabacteroides merdae ATCC
           43184]
          Length = 492

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 179/493 (36%), Positives = 255/493 (51%), Gaps = 55/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  I IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPISIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHHA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        NYG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESEGSVYFDVEKYNKDHNYGVLSG 172

Query: 168 RKIDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R ID+    TR  + +  K+NP DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIDDMLNTTRALDGQDEKRNPIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + E   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGEDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
           IT+ E      K   +++    IR  +L  HYR  +DF+ + L  AE  L +        
Sbjct: 292 ITLEEFFTGDNKVLSQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLMDAYNHL 351

Query: 341 ----STSKGIIDPAVL-----SALYNDLNTVSAIQALHKLAR--ESTKN----------H 379
               ++    +D   L      A+ +DLN+   I  L   AR   S K+           
Sbjct: 352 MKLKASDVSTVDVKDLRRKCYDAMNDDLNSPIVIAHLFDAARAINSVKDGKATISAEDLK 411

Query: 380 DLLPIFNASA-HILGI--EVCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQ 434
           +L  +F+     ILGI  E      N N +   A++ L+  R      K ++++D IR +
Sbjct: 412 ELQDVFHTFVFDILGIKDEAASGGSNNNEAFGKAMDLLLTIRQQAKANKDWATSDKIRNE 471

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 472 LTAIGFDIKDTKD 484


>gi|313885925|ref|ZP_07819664.1| cysteine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924614|gb|EFR35384.1| cysteine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 492

 Score =  258 bits (660), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 178/493 (36%), Positives = 258/493 (52%), Gaps = 59/493 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ IYNTLER    F+ I P ++ +YVCGPTVY   H+G+AR  I FD+L+R L++  G 
Sbjct: 3   QLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHL-GY 61

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           K V YVRN+TD+          +DKI ++A+ E    P+  A   +T  +      D+ R
Sbjct: 62  K-VRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLE-PMEVAYYYLTRYH------DSLR 113

Query: 114 LA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
           L   L P+ +P A+ HI + I L+Q I+  G+AY +   + FD     +   YG  S R 
Sbjct: 114 LLNVLPPSIEPLASGHIIEQIALVQQILDAGYAYVSQGSVYFDVLKYHADHPYGILSGRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  K NP DF LWK++ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 VEDMISNTRELDGQDEKHNPLDFALWKKAQPNHIMRWPSPWSEGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGGLDL FPHHE EIAQ+  A + E     W+HN  + ++G+KM+KS GNFIT
Sbjct: 234 GTHFDIHGGGLDLTFPHHECEIAQA-VASQGEPMVKYWMHNNMITVDGKKMAKSAGNFIT 292

Query: 288 INELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEI-LLS 335
           + E             AP+ IR  +L  HYR  +DF+           QRL +A+  L S
Sbjct: 293 LEEFFTGDHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQS 352

Query: 336 KWPQTSTSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTKNHD------------L 381
             P  +++   ID A     A+ +D+NT   I AL   AR     HD            L
Sbjct: 353 LKPSATSTIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGYEQITSEQLEEL 412

Query: 382 LPIFNASAH-ILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
              ++   H ILG++   E  +      +  + A++ L++ R      K + ++D IR +
Sbjct: 413 RRAYDLYLHDILGMQSATETADLSGSQQEAFAGAMDLLLEIRAKAKASKDWETSDLIRDK 472

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 473 LTALGFEIQDTKS 485


>gi|308232507|ref|ZP_07416271.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308369166|ref|ZP_07416800.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu002]
 gi|308378377|ref|ZP_07482373.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu009]
 gi|308213806|gb|EFO73205.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308328560|gb|EFP17411.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu002]
 gi|308352804|gb|EFP41655.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu009]
          Length = 463

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 244/472 (51%), Gaps = 50/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRYYYG 62
           +++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R  L R Y  
Sbjct: 1   MRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARGY-- 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V ++RN+TDI+DKI+ +A                 + + + F      L  L P+ +
Sbjct: 59  --DVAFIRNVTDIEDKILAKA------AAAGRPWWEWAATHERAFTAAYDALDVLPPSAE 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V   
Sbjct: 111 PRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVAAG 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+F
Sbjct: 171 --KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLVF 228

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN +++  +L+      R  
Sbjct: 229 PHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQ------RVR 280

Query: 303 PAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK------GIIDPAVLS 353
           PA  +R  +   HYR  ++F+   +Q   +A + L  +     ++      G   P    
Sbjct: 281 PAE-LRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFAE 339

Query: 354 ALYNDLNTVSAIQALHKLARESTK-----NHD-LLPIFNASAHILGIEVCK------EHL 401
           AL +DL+   A+  +H +  E  +     +HD  L   +A   ++GI  C       E  
Sbjct: 340 ALDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWESR 399

Query: 402 NKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           ++       + + ++  +Q R    + + ++ AD IR +L+  G  + D  +
Sbjct: 400 DETSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTAD 451


>gi|62185411|ref|YP_220196.1| cysteinyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312439|sp|Q5L546|SYC_CHLAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|62148478|emb|CAH64248.1| putative cysteinyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 476

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 168/482 (34%), Positives = 253/482 (52%), Gaps = 56/482 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           ++ + +YNT  R    F    PSN  +++Y CGPTVYD+AHIGN R  I  D+L R+L +
Sbjct: 8   RQNLYLYNTASRTKELFS---PSNDPVKLYTCGPTVYDYAHIGNFRTYIFEDLLKRILLF 64

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           +     V +V NITD+DDK +  A +       N ++   T+   Q F KD   L  L  
Sbjct: 65  F--GYSVKHVMNITDVDDKTLAGACKN------NISLDTYTAPFIQAFFKDVATLHILPA 116

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
              PRAT++IPQM+  I+ ++  G AY   ++ + F     P+YG  S+ ++   +  +R
Sbjct: 117 DAYPRATHYIPQMLVAIRKLLDDGIAYIGQDHSVYFSIKEFPSYGKLSQLQLQNLQCCSR 176

Query: 179 VP-EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           +  ++Y K+N +DF+LWK       G   WESP+G+GRPGWH+ECS M+   LG   DIH
Sbjct: 177 IASDEYDKENLSDFVLWKAYDKHRDGHIYWESPFGKGRPGWHLECSIMAMELLGPSIDIH 236

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+ 
Sbjct: 237 AGGVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD- 294

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-----------SKWPQTSTS 343
                R +    IR  +L +HYR  ++FT + L      L           S +P+++T 
Sbjct: 295 -----RGFSGAEIRYMLLQSHYRMQLNFTEEGLMACRQALKRLRDFISRLESPYPESATI 349

Query: 344 KGIIDPA-------VLSALYNDLNTVSAIQALHKLARES-----------TKNHDLLPIF 385
              ID           +A+ NDLN  +A+ +L     ++             +H +L I 
Sbjct: 350 SEGIDQCGQRFLQDFSNAIANDLNIAAALASLFDFIHQTNSRIDQSHFTQADSHYVLDIL 409

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                +LG+      L   I   + +LV+ER I  K K +  AD +R Q+ S G+++ED 
Sbjct: 410 KKINTVLGVIPFSTSL--EIPSEVARLVEEREIARKEKNWKQADVLRNQIASFGYVVEDT 467

Query: 446 KN 447
           K+
Sbjct: 468 KS 469


>gi|300934657|ref|ZP_07149913.1| cysteinyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 482

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/392 (36%), Positives = 215/392 (54%), Gaps = 39/392 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T  R++ +F+ +   +  +Y+CG TV    HIG+ R  + FD+L   L+    + 
Sbjct: 6   LRIYDTATRQLRDFEPVREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLQAKGLD- 64

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +     P  +      + + + F     +L    P+ +PR
Sbjct: 65  -VAFVRNVTDIDDKILTKAAEN--GRPWWE----WAATHERAFSWAYDQLGVAPPSIEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIPQMI  +Q II +GH Y A+  +    ++I NYG  S +K+DE   G        
Sbjct: 118 ATGHIPQMIEYMQRIIDNGHGYAADGNVYAQPATIQNYGFLSGQKLDEMDQGESAGTG-- 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG  FDIH GGLDL FPH
Sbjct: 176 KRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGGEFDIHCGGLDLQFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+  A   ++ A  W+HNG++ + G KMSKS GN ++I  +L+  +        
Sbjct: 236 HENEAAQATAAG--DRFARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR-------- 285

Query: 305 PV-IRLAMLMTHYREPIDFTVQRLTEA--------EILLSKWPQTSTSK----------G 345
           PV +R  +   HYR  ++++   L EA        + LL      S S           G
Sbjct: 286 PVELRYYLGSGHYRSMLEYSETALGEAAAGYRRIEKFLLRTAASLSDSDATSLPEIIPTG 345

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
            +  A  + + +DL    A+  +H+  RE  K
Sbjct: 346 EVTDAFAAKMDDDLAVPQALALIHERVREGNK 377


>gi|289642333|ref|ZP_06474481.1| cysteinyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289507865|gb|EFD28816.1| cysteinyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 528

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/334 (41%), Positives = 190/334 (56%), Gaps = 25/334 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R L     E 
Sbjct: 3   LHIYDTRTRRLRPFEPLRPGHVSVYVCGPTVQSPPHVGHIRTAVAFDLLRRWLVASGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TDIDDKII  A +        +++  + ++ T+ F      +  L PT QPR
Sbjct: 62  -VTFVQNVTDIDDKIIINASRA------GESVWELATRQTRAFDDAYRAVGVLPPTIQPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+M+ LI  ++  G+AY     + F  S    YG  S ++ +  +      E   
Sbjct: 115 ATGHIPEMLALIGRLVDTGYAYPGGGSVWFRVSRFAGYGGLSHQRPEAVQASPECDEG-- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK + P EP WESPWGRGRPGWHIECSAM+  YLG+VFDIHGGGLDL+FPH
Sbjct: 173 KVDPRDFALWKGAKPGEPFWESPWGRGRPGWHIECSAMAGKYLGEVFDIHGGGLDLVFPH 232

Query: 245 HENEIAQSCCADRIE--------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           HENE AQS  A            + A  W+H G L   G KMSKS GN   +++  E  +
Sbjct: 233 HENERAQSASAAHSHGGAGGGAPQMARYWMHVGLLTTGGTKMSKSLGNSFLVSDAFEQVR 292

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
                    V+R  +L  HYR  +++T + L E+
Sbjct: 293 -------PQVLRYHLLSAHYRSSLEYTPEGLAES 319


>gi|296270626|ref|YP_003653258.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093413|gb|ADG89365.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 451

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 155/430 (36%), Positives = 229/430 (53%), Gaps = 38/430 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + EF    P  + +Y+CGPTV    H G  R  I FD+L R L++   + 
Sbjct: 3   LRLYDTFHRAVREFSPRIPGRVSIYLCGPTVVTPPHAGQMRSQIDFDILQRWLKFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V   RN+TD++DKII R      SI        IT    + F +    L CL P+ +PR
Sbjct: 62  -VLLCRNVTDVEDKIIGR------SISEGTPWWRITDSVYRMFDRAFADLGCLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+MI +I+ ++  GHAYE + ++ F  +S P YG+ S ++++  ++  R P +  
Sbjct: 115 ATGHIPEMIEMIEELLARGHAYEHDGDVYFSVASYPRYGALSGQRMERLRVTER-PAR-G 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWKR    EP W+SPWG+GRPGWH+ECSAM+  YLG  FDIHGGG +LIFPH
Sbjct: 173 KRDPRDFTLWKRVDLGEPVWDSPWGKGRPGWHLECSAMARRYLGPAFDIHGGGSNLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS      ++ A  W+HNG +   G K+ K  G+   +  LL      GR  P 
Sbjct: 233 HENELAQSRALG--DEFARFWVHNGQVTYGGEKIRKRLGDPFAVPALL------GRVRPV 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----SALYNDL 359
             +R  +   HYR  ++F++  L EA     +  +     G     VL      A+ +DL
Sbjct: 285 E-LRYYLAAAHYRSRLEFSLAALEEAAAAYRRIERFVLRVGADRSPVLPHRFAEAMDDDL 343

Query: 360 NTVSAIQALHKLARES-----TKNH----DLLPIFNASAHILGIEVCKEHLN-----KNI 405
           N   A+  +H    E      T++H     +     A   +LG++   EH       + I
Sbjct: 344 NVPRALSLVHAAVAEGNAALVTRDHVAAARICGSVRAMLDVLGLDPLSEHWAGGEPLEEI 403

Query: 406 SIAIEKLVQE 415
           + A+ +LV+E
Sbjct: 404 AAAVLRLVRE 413


>gi|323342428|ref|ZP_08082660.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463540|gb|EFY08734.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 445

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 158/465 (33%), Positives = 245/465 (52%), Gaps = 48/465 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+    + EF+ I+   + MYVCGPTVY++AHIGNARP++VFD+L R+L     + 
Sbjct: 1   MKLYNSKSNSLEEFKPIEEGKVSMYVCGPTVYNYAHIGNARPIVVFDLLRRVLETLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TD+DDKII++A +E          S+I+++  + + K    L        P+
Sbjct: 60  -VKLVSNYTDVDDKIIKKASEEGVDE------SVISNRYIEAYEKVRKGLHADHVQATPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            TN +P++I  IQ++I H +AY +  ++ F  S    YG+ S + IDE  +G R+ E  +
Sbjct: 113 VTNTMPEIISFIQDLIDHDYAYASKGDVYFRVSKAEEYGAISSQNIDELMVGARIEENSN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFP 243
           K+NP DF+LWK +      W++PWG+GRPGWH EC  M ++ +  ++ DIHGGG DL FP
Sbjct: 173 KENPLDFVLWKDTNDNGIKWDAPWGKGRPGWHTECVVMINNEFKQEIIDIHGGGQDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ C A      AN W+HN  LN++G KMSKS GN +   E ++  K G  +  
Sbjct: 233 HHENESAQ-CRALHNHDLANYWVHNAMLNIDGEKMSKSIGNVMWAQEFID--KLGENA-- 287

Query: 304 APVIRLAMLMTHYR--------------EPIDFTVQRLTEAEILLSKWP-QTSTSKGIID 348
               R  ++ THYR              + +D   Q L +A I L K   Q  T+   + 
Sbjct: 288 ---TRWLLMSTHYRLTLNITEELVEQTHKELDRIFQGLNKAYIELEKLEFQIDTNYDELR 344

Query: 349 -PAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAH----ILGIEV 396
               + A+ +DLN  +A       ++ L+   R+   N   +  +  +      +LGI  
Sbjct: 345 FNQFMDAMSDDLNVANANVVLFDTVKQLNAAVRQREINASDVSKYIVTVEKMLDVLGISY 404

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            +  L++   +  ++  + +      K F  AD  R +L  +G +
Sbjct: 405 TRIVLDEAARLLFKQWNEAK----ARKDFDDADRYRGELIERGLL 445


>gi|332186293|ref|ZP_08388038.1| cysteinyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332013661|gb|EGI55721.1| cysteinyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 485

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 168/479 (35%), Positives = 246/479 (51%), Gaps = 59/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R +  FQ IDP+N+R+Y CGPTVY++AHIGN R  +  D L R+LR+     
Sbjct: 12  LTLYNSLTRALETFQPIDPANVRVYSCGPTVYNYAHIGNLRAYVFTDTLSRVLRWKGWP- 70

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            +T++ NITD+          DDK+   A++          I  I +  T  F ++   L
Sbjct: 71  -LTHIINITDVGHLTSDADAGDDKMEAAAKKS------GQDIWSIAAHYTTAFKQNLKDL 123

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
              APT  P AT H+PQMI   + I    H Y   + + FD +++P+YG  +R + DE +
Sbjct: 124 GIAAPTRFPLATEHVPQMIEFAKAIEAK-HCYRLPDGLYFDVTTVPDYGRLARHQDDEGE 182

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
             +R+     K++PADF +W+ S P E     W+SPWG G PGWH+ECS MS  YLG+ F
Sbjct: 183 --SRIDPVAGKRHPADFAIWRSSAPGENRQMEWDSPWGPGAPGWHLECSVMSKQYLGEQF 240

Query: 232 DIHGGGLDLIFPHHENEIAQS----CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           DIH GG+D    HH NEIAQ+    C A+     ANIW+HN FL     KMSKS+G F+T
Sbjct: 241 DIHTGGIDHREIHHPNEIAQNQAHGCTAN---TGANIWMHNNFLVDRTGKMSKSSGEFLT 297

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +  L++      R +     RL  L  HYR  ++F    L  A++ L +  QT       
Sbjct: 298 LQALMD------RGFHPLAYRLMCLQAHYRSEMEFGWDGLAAAQVRLKRLVQTVEGLRSR 351

Query: 341 --STSKGIIDP---AVLSALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASAHI 391
             + SKG   P    + +AL +DL T  A+  L ++  +  ++ D+    L  F+A+  +
Sbjct: 352 ADAASKGDATPYRERLDAALSDDLATPRALPVLDEMLGDKKQSSDVRLAALADFDATLGL 411

Query: 392 LGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + +  L      A      IE  + ER      K F+ +D IR  L + G  + D
Sbjct: 412 QLTTLTRADLRTRPKTATVDEATIEAQLAERRAARAEKDFAKSDMIRDSLLAAGVEVMD 470


>gi|293400415|ref|ZP_06644561.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306815|gb|EFE48058.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 439

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 169/463 (36%), Positives = 243/463 (52%), Gaps = 56/463 (12%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + + I EF+ I    + MYVCGPTVY++ HIGNARP++VFD L R  +   G K V  V 
Sbjct: 1   MNQTIEEFKPIHEHEVNMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAL-GYK-VKMVS 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII+ A++   S         IT K  + +  D   L  + P   PR T  + 
Sbjct: 59  NYTDVDDKIIKVAKECGVSE------KEITEKFIKAYNDDRLALHAMMPDAAPRVTETMD 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            +I  I+ ++  GHAYE + ++ F  +S+ +YG  S ++ID+  +G R+ E   K+NP D
Sbjct: 113 AIIAFIELLVKKGHAYEIDGDVYFRVNSVESYGKLSNQQIDDLMVGARIDENSKKENPLD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAM-SSHYLGK-VFDIHGGGLDLIFPHHENE 248
           F LWKR T     W SPW  GRPGWH EC  M +  + G+   DIHGGG+DL FPHHENE
Sbjct: 173 FTLWKR-TDEGIQWNSPWSVGRPGWHTECVVMINKEFHGEHTIDIHGGGMDLKFPHHENE 231

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IAQS  A      AN WIHNG +N++G KMSKS GN I   +++E  K GG      V+R
Sbjct: 232 IAQSRAAYET-PIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIE--KIGGN-----VLR 283

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV----------------- 351
              L  HYR P++   + +  A+  L K  QTS  +  +  A+                 
Sbjct: 284 WVFLSAHYRSPLNINEEAIETAKKELQK-VQTSLKQAYVKLALADVEITDEAEDTLLTPF 342

Query: 352 LSALYNDLNTVSAIQALH---KLARESTKNHDLLPIF--------NASAHILGIEVCKEH 400
           + A+ +D+NT +A  AL    K+  ++ +  ++   F             +LGIE     
Sbjct: 343 MDAMQDDMNTPNAFAALFETVKVLNQTIRQREVDLAFLQRIVKTVETMLDVLGIE----- 397

Query: 401 LNKNISIAIE--KLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            N  + ++ E  +L  +    +K K F++AD  R +L  KG +
Sbjct: 398 -NNRLILSDEDKELHHKWKAAVKEKDFATADDYRARLIEKGIL 439


>gi|94971018|ref|YP_593066.1| cysteinyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|122986084|sp|Q1IJF8|SYC_ACIBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94553068|gb|ABF42992.1| cysteinyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 495

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 177/514 (34%), Positives = 247/514 (48%), Gaps = 79/514 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  KI  FQ ++ + +RMY CGPTVYD+ HIGN R  IV D L R L+   G K
Sbjct: 3   LELFNTLSGKIETFQPLEDNEVRMYACGPTVYDYGHIGNFRTFIVVDTLRRFLKQS-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V N+TD+DDKII  A ++  ++         T+K  + F++D   L    P     
Sbjct: 62  -LKHVMNVTDVDDKIIRNAARDGKTV------QEYTAKYRKAFLEDCEALNIEHPELLVN 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT+HI +M   I+ +     AY+  +    F  +  P YG  S++       G RV  ++
Sbjct: 115 ATDHIDEMARFIKRMEDLDVAYKTEDGSYYFRIAKFPEYGKLSKKDFAGMNDGARVDVDE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K N  DF LWK   P E  W++  G GRPGWHIECS MS  YLG+ FDIH GG DL+F
Sbjct: 175 YEKDNARDFALWKAPKPGEAKWDTVIGSGRPGWHIECSIMSMKYLGESFDIHLGGEDLVF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +K AN W+H+ FL +EG+KMSKS GNF T+ +L+          
Sbjct: 235 PHHENEIAQSESVTH-KKFANFWVHSRFLLVEGQKMSKSLGNFFTVRDLILM------GH 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTS-TSKGIIDPAVL--- 352
               IR  ++   YR+ ++FT   L +A I + +        QT   ++G  D   L   
Sbjct: 288 KPSSIRFLLMSVPYRKQLNFTFDGLKQAAISVDRLRNFKRRIQTEPFAEGTNDKIGLMAN 347

Query: 353 -------SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGI-EV 396
                  +AL NDLNT  A+  +  L R+          K  D+  +  A      I  V
Sbjct: 348 ETITKIKAALDNDLNTAEALAPIFDLVRDVNAAADAGEVKRGDVASLLEALQKFDEIFAV 407

Query: 397 CKEHLNKNISIA------------------------------IEKLVQERLILLKMKKFS 426
             +  +  +  A                              +E LV E     K K F 
Sbjct: 408 LNDDDSGKVKFAVDWANQEGKADKISAETAEMAKAAGLSDEKVEALVAEHSAARKAKDFK 467

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +D IR +L   G ILE+ K+        RWK+K
Sbjct: 468 RSDAIRAELMESGIILENTKDG------VRWKRK 495


>gi|242310378|ref|ZP_04809533.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522776|gb|EEQ62642.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 467

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 160/473 (33%), Positives = 252/473 (53%), Gaps = 49/473 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++KIY++++++  +F  I+P  +R+YVCGPTVYD +H+G+AR  IVFD+L R+LR   G 
Sbjct: 2   QLKIYDSVQKEKVDFIPINPPEVRLYVCGPTVYDDSHLGHARSAIVFDLLRRVLR-ENGY 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V + +N TDIDDKII ++ Q   S      I+ IT    Q+++ +   L       +P
Sbjct: 61  K-VYFAKNFTDIDDKIINKSLQTGLS------ITEITKTYIQKYLDEMEALGVERADIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +AT  +  +  +IQ ++  G AY+  N +I    +    YGS S R + E ++ +R+   
Sbjct: 114 KATESLESICEMIQELLDKGFAYQTPNGDIYLSVAKDSKYGSLSGR-VAELELQSRIHNS 172

Query: 183 YHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLG----KVFDIHGGG 237
             K++  DF LWK    + + G+ESP+G+GRPGWHIECSAM   +L        DIHGGG
Sbjct: 173 EQKRDSKDFALWKSYKGIGDIGYESPFGKGRPGWHIECSAMIKKHLAYSGQYAIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE +Q+ CA+  +  A  WIHNGF+ + G KM+KS GN   I + L     
Sbjct: 233 ADLLFPHHENEASQTRCAEN-QTIAKYWIHNGFVTINGEKMAKSLGNSFFIKDAL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------WPQTSTSKGIID- 348
             +++   ++R  +L THYR  ++F  + L  A+  L +        +P     +   + 
Sbjct: 287 --KNYDGEILRFYLLGTHYRAGLNFAEEDLLSAKKRLDRIYRIKKRIYPIQEADESQCNE 344

Query: 349 --PAVLSALYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFNASAHILGI--- 394
              A+L AL +DLN   A+  + +           ++  K   +         +LG+   
Sbjct: 345 FKEAILEALNDDLNISKALSVVDEFINKANEFLDKKQKDKISSIAGFLAILERLLGVGGK 404

Query: 395 ---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              E  +  +++     IE L+ +R    K K F+ AD IR++L S G  + D
Sbjct: 405 NPFEYFQLGVSEEQKQEIENLIAQRTEAKKQKDFAKADEIRERLHSMGIEIMD 457


>gi|34541486|ref|NP_905965.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|61216267|sp|Q7MTR6|SYC_PORGI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|34397803|gb|AAQ66864.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 490

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 171/492 (34%), Positives = 248/492 (50%), Gaps = 54/492 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  ++IYNTL RK   F+ I   ++ +YVCGPTVY  AH+G+ARP I FD+LYR LR+ 
Sbjct: 1   MEHPLEIYNTLHRKKERFEPIHKPHVGLYVCGPTVYGDAHLGHARPAITFDLLYRYLRHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          +DKI ++AR E    P+      +T     ++   
Sbjct: 61  GYQ--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PMEVVQYYLT-----RYRHA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P A+ HI + I L++ I+  G+AYE+   + FD         YG  S 
Sbjct: 113 MEALNVLPPSIEPMASGHIIEQIELVKQILKAGYAYESCGSVYFDVEKYNQDHRYGVLSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I+E    TR +  +  K+N  DF LWK + P     W SPWG G PGWH EC+AM   
Sbjct: 173 RNIEEMINNTRRLDGQDEKRNGVDFALWKAAQPEHIMRWPSPWGMGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQ+  A +       W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEEFDIHGGGMDLVFPHHECEIAQA-VASQGHPIVRYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+ E          +++    IR  +L  HYR  +DF+          ++RL +A  LL
Sbjct: 292 ITLEEFFSGAHPSLNKAYSPMTIRFFILGAHYRGTVDFSNEALEAAEKGLERLLDAAALL 351

Query: 335 SKWP---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-- 389
                   TS   G +      A+ +DLN+   I AL   AR     H+      +S   
Sbjct: 352 DGLKTADTTSVEVGDLRKRCYDAMNDDLNSPMVIAALFDAARAINAVHNGQGTITSSNLE 411

Query: 390 -----------HILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                       +LG+          ++    A++ L+  R      K ++++D IR +L
Sbjct: 412 ELRTTFRLFLFDLLGMRDERASSAGGSEAFGKAMDLLLSIRAEAKARKDWATSDKIRDEL 471

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 472 TALGFTIKDTKD 483


>gi|194334830|ref|YP_002016690.1| cysteinyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312648|gb|ACF47043.1| cysteinyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 481

 Score =  258 bits (658), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 178/489 (36%), Positives = 245/489 (50%), Gaps = 69/489 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYN+L R   EF  +    + MYVCGPTVY  AH+G+A+  + FDV+ + LR+  G + V
Sbjct: 5   IYNSLNRVKEEFIPLQDGVVTMYVCGPTVYGHAHLGHAKSYVSFDVVAKWLRHS-GYR-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            Y++NITD+          +DKI  +AR+E    P+      I    T+ + +D  RL  
Sbjct: 63  KYIQNITDVGHLTDDSDEGEDKIARQARKERID-PME-----IAQYYTRSYYEDMDRLGI 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM- 175
             P   P AT HIP  + LI  +I  GHAYE N  + F   S   YG  S R  +E +  
Sbjct: 117 DRPNIAPTATGHIPDQVNLISTLIEKGHAYEVNGNVYFSVESFKEYGKLSGRTTEEARQS 176

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVF 231
           G RV  +  K++PADF LWK++   EPG    W+SPWG G PGWH ECSAM+  YLG+  
Sbjct: 177 GGRVETRSEKRHPADFALWKKA---EPGHLMKWDSPWGSGYPGWHAECSAMAMKYLGETI 233

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG++  FPHHE EIAQS  A   +     W+HN  + + G KM KS GNFI + ++
Sbjct: 234 DIHGGGMENKFPHHECEIAQSEAATG-KPYVRYWMHNNMVTVNGTKMGKSLGNFINLKDI 292

Query: 292 LETKKFGGRSWPAP-VIRLAMLMTHYREPIDFTVQRL----TEAEILLSKWP---QTSTS 343
              K+F      AP VIR  +L +HYR P+DF+   +    T  E L   W    Q +  
Sbjct: 293 F--KRF------APVVIRFFILQSHYRSPLDFSETAIDASRTGLEKLQDTWTRLQQAAPG 344

Query: 344 KGIIDP-----AVLSALYNDLNTVSAIQALHKLARE--------STKNHDLL----PIFN 386
            G I+       +  A+ +D NT  AI  L  LA+         S  N D L     +F 
Sbjct: 345 SGEIETRPFQERLTEAMNDDFNTPIAIAVLFDLAKAVNTAIAAPSGLNQDSLDRCISLFR 404

Query: 387 A-SAHILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY-----IRKQLES 437
           +    +LGI      ++    N        V   LI ++ +  S  DY     IR +L  
Sbjct: 405 SFGEEVLGILQNPATEKGKTNNEDEETLDTVMNLLIDIRSRARSGKDYELSDLIRDKLAE 464

Query: 438 KGFILEDYK 446
            G  ++D +
Sbjct: 465 AGITMKDTR 473


>gi|227547937|ref|ZP_03977986.1| cysteine--tRNA ligase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079948|gb|EEI17911.1| cysteine--tRNA ligase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 485

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 157/478 (32%), Positives = 246/478 (51%), Gaps = 63/478 (13%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRYYYGE 63
           +I++T  R+   F+ +   ++ +Y+CG T     HIG+ R  + FD++ R  L + Y   
Sbjct: 21  RIFDTSARRSRVFEPVREGHVSIYLCGATPQSSPHIGHLRSGVAFDIVRRWFLAKGY--- 77

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN+TDIDDKI+ +A +     P  + +S       ++F +    L  L P+ +P
Sbjct: 78  -DVAFVRNVTDIDDKILAKAAEN--GRPWWEWVSTYE----REFTRAYNLLGVLPPSVEP 130

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTR 178
           RAT H+ QM+  ++ +I +G AYEA   + FD ++       +YGS S  +++E + G  
Sbjct: 131 RATGHVTQMVDYMRRLIDNGFAYEAAGSVYFDVAAWVRAEGSDYGSISGNRVEEMEPGE- 189

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P+   K+ P DF LWK + P EP W +PWG GRPGWHIECSAM++ YLG  FDIH GGL
Sbjct: 190 -PDNRGKRGPHDFALWKAAKPGEPSWPTPWGEGRPGWHIECSAMATWYLGGSFDIHAGGL 248

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A   +  A  W+HN ++ + G KMSKS GN ++I+ +L T +  
Sbjct: 249 DLQFPHHENEQAQSHAAG--DGFATYWMHNHWVTMAGEKMSKSLGNVLSIDNMLSTVR-- 304

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPA 350
                 PV +R  +   HYR  ++++ + L+EA       E  +++    +  K    P 
Sbjct: 305 ------PVELRYYLGSAHYRSVLEYSPEALSEAAAGYRRIEDFVAR--AGTPEKTTWTPQ 356

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIE------ 395
              AL +D +   A+  +H   RE  K           ++     A A +LG++      
Sbjct: 357 FEQALNDDFSVPKALAEIHNHVREGNKALAAGDGARASEIAGGVRAMAAVLGVDPGEWAR 416

Query: 396 ---------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                       E  NK + + +   ++ R      K ++SAD +R +L + G  + D
Sbjct: 417 AAGEGVGGASSSEAANKALDVLVAAELERRAAARAEKDWASADAVRDRLAAAGIDITD 474


>gi|229094812|ref|ZP_04225817.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228688555|gb|EEL42428.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 420

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 156/444 (35%), Positives = 227/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   E  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N++  KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------Q 339
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +          +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 340 TSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
             +S  + D              A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILED------TAQGTRWKR 419


>gi|221633882|ref|YP_002523108.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156184|gb|ACM05311.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 407

 Score =  257 bits (657), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/349 (39%), Positives = 195/349 (55%), Gaps = 21/349 (6%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + ++++N+L   I  F  +D   +R+YVCG T YD  H+G+A   +VFD+L R+ +Y+ 
Sbjct: 6   SEAVRLFNSLTGTIEPFAPLDGRTVRLYVCGVTPYDTTHMGHAMTYLVFDILNRICQYH- 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V YV+NITDIDD I+ +ARQ      + +    +  +  +QF +D   L  L P+ 
Sbjct: 65  GWR-VKYVQNITDIDDDILRKARQ------VGEPWDRLGDRYIRQFQEDLNALNVLFPSV 117

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ-----KMG 176
            PRAT  IP MI +IQ ++  G AY  +  + F  +S P+YG   R   DE      + G
Sbjct: 118 FPRATEEIPLMIEIIQKLLERGAAYMRDGNVYFRVASDPDYGHLCRCSRDEMIRLSAERG 177

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P+   K++P DF+LW+ + P EP W+SPWG GRPGWHIECSAM+  YLG   D+HGG
Sbjct: 178 AD-PQDPRKEDPLDFLLWQAAQPGEPTWDSPWGPGRPGWHIECSAMAMKYLGPQIDVHGG 236

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLI+PHHE+EIAQS         A  W+H   +  EG KMSKS GN + + + L    
Sbjct: 237 GYDLIYPHHESEIAQSESYTGTSPFARFWVHVAMVEYEGAKMSKSLGNLVLVRDTL---- 292

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
              R      IRL +L  HYR P  +        E L+ +  +  T+ G
Sbjct: 293 ---RRHTGDAIRLYLLSHHYRTPFAYEDDGPARFEPLVQRLREAVTAPG 338


>gi|229113766|ref|ZP_04243201.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669637|gb|EEL25044.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 420

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 156/444 (35%), Positives = 227/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   E  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N++  KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------Q 339
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +          +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 340 TSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
             +S  + D              A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILED------TAQGTRWKR 419


>gi|34556870|ref|NP_906685.1| cysteinyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|61216261|sp|Q7MA68|SYC_WOLSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|34482585|emb|CAE09585.1| CYSTEINYL-TRNA SYNTHETASE (FRAGMENT) [Wolinella succinogenes]
          Length = 467

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 169/472 (35%), Positives = 251/472 (53%), Gaps = 49/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+++++R+  EF  +    + +YVCGPTVYD +H+G+AR  I FD+L RL+  + G +
Sbjct: 3   IKIFDSVKREKVEFIPLKKGEVSLYVCGPTVYDDSHLGHARSAIAFDLLRRLME-FEGYR 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII++      S+   + I  IT +    +++D  +L    P  +PR
Sbjct: 62  -VRFVKNFTDIDDKIIKK------SLESGEEIGAITERYITSYLEDMQKLGIKRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  +IQ+++  G AY+    +I  D    P+YG  S R  D +++ +R+    
Sbjct: 115 ATESLDLMWEMIQSLLQKGIAYQTPRGDIYLDVKQDPSYGKLSGRGEDLEQV-SRIESSE 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGL 238
            K++P DF LWK      + G+ESP+GRGRPGWHIECSAM   +L K      DIH GG 
Sbjct: 174 EKRDPRDFALWKSYKGQSDVGYESPFGRGRPGWHIECSAMIEKHLAKEGDYAIDIHAGGS 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE  Q+ CA   E  A  W+HNGF+ + G KMSKS GN   + + L      
Sbjct: 234 DLLFPHHENEACQTRCATGRE-LAKYWMHNGFVTINGEKMSKSLGNSFFVKDAL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPA----- 350
            R +   V+R  +L THYR  ++F+ + L  ++  L +  +     G   +  P+     
Sbjct: 287 -RVYDGEVLRFYLLSTHYRMGLNFSEEDLLASKKRLDRLYRLKKRVGEGEVGAPSEKFLE 345

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-SAHILG-IEVCKEHLNKNISI 407
            +L  L +D+N   A+ A+ ++   S +  D  P   A  A I G +EV +  L      
Sbjct: 346 RLLEGLRDDMNISRALSAMDEMLTLSNEELDSSPKERALQATIRGNLEVLERLLGIGAKS 405

Query: 408 AI---------------EKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            I               E+L++ER    K K F+ AD IRK L  +G  L D
Sbjct: 406 PILYFQMGVSPEEKEKIEELIKERAEAKKAKDFARADEIRKSLSDQGIALLD 457


>gi|108801700|ref|YP_641897.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870851|ref|YP_940803.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123368663|sp|Q1B2P3|SYC_MYCSS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629832|sp|A1UMF5|SYC_MYCSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|108772119|gb|ABG10841.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696940|gb|ABL94013.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 481

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 155/473 (32%), Positives = 241/473 (50%), Gaps = 52/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T+   + +F  +   ++ +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 17  LRLYDTMTGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGLD- 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A       P  +      +   + F      L  L P+ +PR
Sbjct: 76  -VAFIRNVTDIDDKILNKAAD--AGRPWWE----WAATYERAFSAAYDALGVLPPSAEPR 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ LI+ +I  GHAY  + ++ F+ +++P+YG  S  +ID+   G  V     
Sbjct: 129 ATGHITQMVELIERLIDRGHAYTGDGDVYFNVATLPDYGKLSGHRIDDVHQGEGVATG-- 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+FPH
Sbjct: 187 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDLVFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN ++I  +L+  +       A
Sbjct: 247 HENEIAQAEAAG--DGFARFWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR-------A 297

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGII-----DPAVL 352
             +R  +   HYR  ++F+   L +A       E  L +     T  G +      P   
Sbjct: 298 AELRYYLGSAHYRSMLEFSETALQDAVKAYAGVEDFLHR---VRTRVGTVVPGDWTPKFA 354

Query: 353 SALYNDLNT------VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK------EH 400
           +AL +DL+       V A +A+   A +S  +   +    +   ++GI  C       E 
Sbjct: 355 AALDDDLSVPIALAEVHAARAVGNRALDSGDHETAMTQARSIRAMMGILGCDPLDERWES 414

Query: 401 LNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++       I + +   +  R      K +++AD IR +L+  G  + D  +
Sbjct: 415 RDETSAALAAIDVLVRWALDSRADARNRKDWATADQIRDRLKEAGIEVTDTAD 467


>gi|11387154|sp|Q9RTT6|SYC_DEIRA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 498

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 171/507 (33%), Positives = 253/507 (49%), Gaps = 78/507 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +Y+T++R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R L ++  + 
Sbjct: 18  ITLYDTMQRQKVPFVPGTPGYVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRALTHFGYQ- 76

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YV NITD+          +DK+  RAR E    P+      +  K    F +D   L
Sbjct: 77  -VRYVSNITDVGHLLNDADEGEDKLQARARLEQLE-PME-----VADKYFWSFFRDMDAL 129

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P+  PRAT HI + I LI+ +I  GHAYE+   + FD  S P YG  S RK+D+Q+
Sbjct: 130 NVLRPSINPRATGHIQEQIKLIEELIEKGHAYESAGSVYFDVRSWPEYGKLSGRKLDDQE 189

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            GTR   +  K++P DF LWK++ P     W+SPW  G PGWHIECSAMS  YLG+ FDI
Sbjct: 190 EGTREAVRDEKRDPRDFALWKKAEPEHLMRWDSPWSVGFPGWHIECSAMSLKYLGEGFDI 249

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHE EIAQ+  A      A  W+HN  L + G KMSKS GNF TI ++L 
Sbjct: 250 HGGGLDLQFPHHEAEIAQAEAAG--HHFARYWMHNNMLTIGGEKMSKSKGNFTTIQDIL- 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------S 341
                 + +   V+R  ++ +HYR   +   +    A     +  +T            +
Sbjct: 307 ------KKYDPMVVRFLLVSSHYRSVTEMNEEAFASAANGYRRLSETLHEIERRLKDAPA 360

Query: 342 TSKGIIDPAVLS-------ALYNDLNTVSAIQALHKL--------------------ARE 374
            S   +D  + +       A+ +D NT  A+ +L  L                    AR+
Sbjct: 361 GSDTALDSKIAARVTEFEDAMRDDFNTPKAVASLFGLTGELNTALNAGPVGRDTLERARD 420

Query: 375 STKN--HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
           + ++   D+L +F  +     +      +   I   ++ +++ R      K+++ AD +R
Sbjct: 421 AYRSLGGDVLGLFAETGSAASVAQDDASV---IDALMDLVLKARQNYRLQKQYAEADELR 477

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + L   G  +ED K+        RWK+
Sbjct: 478 ETLGKAGITVEDTKDG------ARWKR 498


>gi|331699815|ref|YP_004336054.1| cysteinyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326954504|gb|AEA28201.1| cysteinyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 482

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 244/475 (51%), Gaps = 49/475 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++++T  R+  +F  +    + MYVCG TV    HIG+ R  + +DVL R L Y   +
Sbjct: 20  SLRLHDTATREQRDFVPLRAGTVSMYVCGATVQGVPHIGHVRSSLNYDVLRRWLTYSGHD 79

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  VRN+TDIDDKI+ +A       P  +      + + + F      L CL  + +P
Sbjct: 80  --VLLVRNVTDIDDKILRKAADA--GRPWWE----WAATHERAFSAAYDALGCLPASAEP 131

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+ QM+ LI  +I  GHAY A  ++ F   S P YGS S +K+D+   G    +  
Sbjct: 132 RATGHVTQMVDLIARLIDRGHAYAAGGDVYFAVRSFPEYGSLSGQKVDDVAQGE--GDCG 189

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIHGGGLDL+FP
Sbjct: 190 DKRDPLDFTLWKGAKPGEPSWPTPWGAGRPGWHLECSAMATAYLGPEFDIHGGGLDLVFP 249

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS  A   +  A  W+HN ++ + G KMSKS GN ++I  +L+  +       
Sbjct: 250 HHENEQAQSHAAG--DGFARYWLHNAWVTMGGEKMSKSLGNTLSIPAMLQRVR------- 300

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGI---IDPAVLS 353
              +R  ++  HYR  I+++   L+E+       E  L +  + + + G+   +  A  +
Sbjct: 301 GVELRYYLVGPHYRSSIEYSDAALSESVSAYRRIEGFLGRVTERAGTPGVAAEVPAAFAA 360

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN 404
           AL +DL T  A+  +H   RE     D               A   +LG++   E     
Sbjct: 361 ALDDDLGTPGALAVVHNTVREGNSALDAGDHAAAVRAAESVRAMTGVLGLDPLDEKWAGG 420

Query: 405 ---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                    +   ++ L+Q R      + F++AD +R +L + G  +ED   PD 
Sbjct: 421 GSDTAALGALGSLVDDLLQRRQEARAARDFAAADEVRDRLTAAGISVED--GPDG 473


>gi|320108591|ref|YP_004184181.1| cysteinyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927112|gb|ADV84187.1| cysteinyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 492

 Score =  257 bits (656), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 179/511 (35%), Positives = 252/511 (49%), Gaps = 76/511 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++NTL  ++        + +RMY CGPTVYD+ HIGN R  +  DVL R      G K
Sbjct: 3   IDLFNTLGGRVEALVPQHDNELRMYCCGPTVYDYGHIGNFRTFLHVDVLRRFA-ALKGMK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V N+TD+DDKII  A     ++PI +     T+K  + F +D   L    P    R
Sbjct: 62  -LKHVMNVTDVDDKIIRNAAA--ANMPIAE----YTAKFERAFFEDMDALGVQRPEIIAR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT +I  M+ LI+ +     AY+  +    F  +  P+YG  S++  D  + G RV  ++
Sbjct: 115 ATENIGDMVTLIEKLASEDIAYKTEDGSWYFRIARFPDYGKLSKKDFDGIEDGARVDVDE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K    DF LWK   P E  W++  G GRPGWHIECSAM+  +LG  FD+H GG DL F
Sbjct: 175 YEKDAARDFALWKAVKPNEHSWDTSLGIGRPGWHIECSAMAMKHLGPTFDLHAGGEDLTF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A  +   A  W H  FL +EG+KMSKS GNF T+ +LL       + +
Sbjct: 235 PHHENEIAQSEAASHV-PLARHWFHVRFLLVEGKKMSKSEGNFYTLRDLLL------KGY 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--TSKG---IIDPAVL----- 352
            A  IR  +L   YR  ++FT + LTE+   + +    +    KG   + + A L     
Sbjct: 288 RASAIRFLLLSVPYRHQMNFTFEGLTESANAIDRLRTFARRLDKGEFAVGENAGLAALTT 347

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKN--------------HDLLPIFNASAHI 391
                  +AL NDLNT  A  A+  L R +                  DLL  F++   +
Sbjct: 348 EKLRLFDAALSNDLNTAEARAAIFDLVRAANSAADTGTLLAGNVASIRDLLARFDSIFDV 407

Query: 392 L---GIEVCKEHLN----------------KNISIA---IEKLVQERLILLKMKKFSSAD 429
           L     +V ++ L                  + S +   I+KLV ER +  K + F+ AD
Sbjct: 408 LTDRDQQVTRDALAWAEAEGRLGEAAPDLVASSSFSEDDIQKLVDERTLAKKQRNFARAD 467

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IRK+L  KG ++ED      G+    WK+K
Sbjct: 468 AIRKELAEKGILIED------GKDGVSWKRK 492


>gi|302348041|ref|YP_003815679.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328453|gb|ADL18648.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 476

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 173/484 (35%), Positives = 240/484 (49%), Gaps = 65/484 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL R+   F+   P  + MYVCGPTVYD+ HIG+A+  + FD + R L       
Sbjct: 3   LTVTNTLGRREEVFRPWSPPLVTMYVCGPTVYDYVHIGHAKTFVAFDGIKRYLSLI--GY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITDIDDKII+RA     S         +     Q +++  +RL      H PR
Sbjct: 61  SVYHVQNITDIDDKIIKRASDRGVSW------KEVADSYAQDYLESLSRLNIRVDLH-PR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFS---RRKIDEQKMGTRVP 180
            T+HI ++I  I  +I  G+AY A +  + FD  + P+YG  S    + + +Q  G  V 
Sbjct: 114 VTSHINEIIDFIGKLIEKGYAYVAPSGSVYFDVDAYPDYGRLSGNFNKALWDQGEGV-VS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           EK H   P DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG   DIHGGG DL
Sbjct: 173 EKRH---PYDFALWKAAKPGEPWWESPWGRGRPGWHIECSVMSSRYLGSRIDIHGGGSDL 229

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENE AQS            W+H G L + G KMSKS GN +++ + +        
Sbjct: 230 IFPHHENERAQSESLFG-GPWVKYWLHTGMLTIRGEKMSKSLGNIVSLRDAIN------- 281

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SK 344
            W   VIR+ +L +HYR  ++++ Q L +A+ L+ +    ++                + 
Sbjct: 282 EWGPNVIRMWVLTSHYRGSLEYSEQSLGQAKKLVERLRDIASDVVKRLSKEEYVNYMKAA 341

Query: 345 GIIDPAVLSALY--------NDLNTVSAIQALHKLARESTK-------------NHDLLP 383
            + +   L +LY         D N   A  ++  L  E  K              + +L 
Sbjct: 342 DVDELFKLRSLYLNWHAAMQRDFNMGEAAGSVWALTSEYYKYIASSESRALIAFTYKMLV 401

Query: 384 IFNASAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            FN    +L     +  +    S+    I+ LV+ R  L K K +  ADYIR +L S G 
Sbjct: 402 DFNRVYAVLDDIFERAPMAPVASLEDQLIDLLVEVRSQLRKNKMYDLADYIRSKLASYGI 461

Query: 441 ILED 444
            L D
Sbjct: 462 TLVD 465


>gi|170049121|ref|XP_001870889.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167871024|gb|EDS34407.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 516

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 176/498 (35%), Positives = 248/498 (49%), Gaps = 77/498 (15%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           I+IY+  ER     Q A DPS+    Y CGPTVYD AHIG+A   +  D++ R+LR ++ 
Sbjct: 28  IRIYSCKERAKVPLQLASDPSSFTSFYTCGPTVYDSAHIGHASCYVRLDIVQRILRDHFR 87

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V+ + NITDIDDKII+RA ++    P  D    ++ +  Q+F  D  RL    P  +
Sbjct: 88  LRLVSAM-NITDIDDKIIKRAGED--GRPWQD----VSRRYEQEFWGDLQRLNVRLPDIR 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            R T+HIP ++  ++ +I  G AY+++++ + F+TS    YG        E+        
Sbjct: 141 LRVTDHIPAIVGFVEALIREGFAYKSSDDSVYFETSRYSQYGKLQNIPAVEESTSE---- 196

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KK+ ADF LWK + P EP WESP+G GRPGWHIECS +++   GK  D H GGLDL 
Sbjct: 197 --GKKSAADFALWKAAKPGEPAWESPFGPGRPGWHIECSTLATQIFGKRLDFHAGGLDLR 254

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQSCC   +      WIH G L+LEG+  KMSKS  N I+I ELLE      
Sbjct: 255 FPHHENEEAQSCCYHGVPDWVQHWIHTGQLHLEGQTAKMSKSLKNTISIGELLERSS--- 311

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQT---- 340
               A   R+  L++HYR  I+F  Q +T A  +L K+               P T    
Sbjct: 312 ----ADEFRMLCLLSHYRSAIEFGDQSMTVATNVLRKFHSFFDDSKAYVSGVKPATVINS 367

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-----------------ARESTKNHD 380
               ++   ID  +   L ND NT SAI +L  L                 A ES     
Sbjct: 368 ADLQSTLQEIDLKIDEFLRNDFNTASAITSLGDLASVVHKSINQKPPEAVQASESGTVQA 427

Query: 381 LLPIFNASAHILGIEVCKEHLNKNIS------------IAIEKLVQERLILLKMKK-FSS 427
           +        ++ G+E   E+    IS            + I   V+ + I  K ++ F+ 
Sbjct: 428 VTNYIRDKLNLFGLEAFGENRKSEISSKDSTGQIIDSVVQIRNSVRGQAIESKDRRLFAV 487

Query: 428 ADYIRKQLESKGFILEDY 445
            D +R QL+  G  ++D+
Sbjct: 488 CDQMRNQLKQAGVEVKDH 505


>gi|126437687|ref|YP_001073378.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|187629831|sp|A3Q6W0|SYC_MYCSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126237487|gb|ABO00888.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 481

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 155/473 (32%), Positives = 241/473 (50%), Gaps = 52/473 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T+   + +F  +   ++ +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 17  LRLYDTMTGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGLD- 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A       P  +      +   + F      L  L P+ +PR
Sbjct: 76  -VAFIRNVTDIDDKILNKAAD--AGRPWWE----WAATYERAFSAAYDALGVLPPSAEPR 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ LI+ +I  GHAY  + ++ F+ +++P+YG  S  +ID+   G  V     
Sbjct: 129 ATGHITQMVELIERLIDRGHAYTGDGDVYFNVATLPDYGKLSGHRIDDVHQGEGVATG-- 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+FPH
Sbjct: 187 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDLVFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN ++I  +L+  +       A
Sbjct: 247 HENEIAQAEAAG--DGFARFWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR-------A 297

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGII-----DPAVL 352
             +R  +   HYR  ++F+   L +A       E  L +     T  G +      P   
Sbjct: 298 AELRYYLGSAHYRSMLEFSETALQDAVKAYAGVEDFLHR---VRTRVGTVVPGDWTPKFA 354

Query: 353 SALYNDLNT------VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK------EH 400
           +AL +DL+       V A +A+   A +S  +   +    +   ++GI  C       E 
Sbjct: 355 AALDDDLSVPIALAEVHAARAVGNRALDSGDHETAMTQARSIRAMMGILGCDPLDERWES 414

Query: 401 LNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++       I + +   +  R      K +++AD IR +L+  G  + D  +
Sbjct: 415 RDETSAALAAIDVLVRWALDSRAEARNRKDWATADQIRDRLKEAGIEVTDTAD 467


>gi|315104398|gb|EFT76374.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
          Length = 490

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 166/486 (34%), Positives = 240/486 (49%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 17  FKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 70

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 71  CSGYRVTVVANVTDIDDKILAK------SAAAGTPWWAHAYHYENELHAAYKALGCRPPT 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE     
Sbjct: 125 YEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAE 184

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 185 DSDPR-GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIH 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A+ W+HN ++ + G KMSKS GN   ++E+  T
Sbjct: 244 GGGIDLRFPHHENELAQSAAAGR--PFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEV--T 299

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T+  L EA   + +            
Sbjct: 300 KTYSPRA-----VRYFLLAPHYRSMIEFSPSDEGTMGSLDEATKAIERIDSFLDRASNLV 354

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL-----------ARESTKNH-----DL 381
            +  T+   +  A ++A+ +DL T  A+ AL                E+T++H      +
Sbjct: 355 GEQVTASHELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAM 414

Query: 382 LPIFN---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           L +F     +     +    + L   +   +  ++++R      K +++AD IR  L + 
Sbjct: 415 LAVFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNL 474

Query: 439 GFILED 444
           G  +ED
Sbjct: 475 GLTIED 480


>gi|270339596|ref|ZP_06005360.2| cysteine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334442|gb|EFA45228.1| cysteine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 498

 Score =  256 bits (655), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 175/497 (35%), Positives = 255/497 (51%), Gaps = 59/497 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK+ + +YNTL R    F+ +   N+ MYVCGPTVY   H+G+ARP I FDVL+R L++ 
Sbjct: 3   MKQNLLVYNTLTRSKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVLFRYLKHL 62

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          +DKI ++AR E    P+      I    T ++ K 
Sbjct: 63  GYQ--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----IAQHYTNRYHKA 114

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD +       YG  S 
Sbjct: 115 MEALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVAKYDKDHKYGILSG 174

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R + +    +R +     K+N ADF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 175 RNLTDIINNSRELSGTDEKRNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 234

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + E+    W+HN  + + G+KM KS GNF
Sbjct: 235 YLGDHFDIHGGGMDLVFPHHECEIAQA-VASQGEQMVRYWMHNNMITINGQKMGKSLGNF 293

Query: 286 ITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE------------- 331
           IT+ +             +P+ IR  +L  HYR  +DF+   L  A+             
Sbjct: 294 ITLEQFFNGDHESLEQAYSPMTIRFFILSAHYRGTVDFSNDALKAAKKGLEKLMTGIADL 353

Query: 332 --ILLSKWPQTSTSKGI--IDPAVLSALYNDLNTVSAIQALHK--------LARESTKNH 379
             I  SK  Q  T+K +  +   +  A+ +DL T   I AL +        L  ++  + 
Sbjct: 354 DRIQPSKGSQPDTAKFVKALRQRLYDAMNDDLQTPLVISALFEACHLVNLLLDHKTKISE 413

Query: 380 DLLPIFNASAHI-----LGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSADY 430
           D L   + + H+     LG++  +   N+    A  K+V+  L L +     K ++++D 
Sbjct: 414 DDLKELSDTMHVFTFDLLGLQNEQGESNEVREEAYGKVVEMVLKLRQQAKEAKDWATSDE 473

Query: 431 IRKQLESKGFILEDYKN 447
           IR  L   GF ++D K+
Sbjct: 474 IRDALAEAGFEVKDTKD 490


>gi|188995669|ref|YP_001929921.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188595349|dbj|BAG34324.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 486

 Score =  256 bits (655), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 173/490 (35%), Positives = 246/490 (50%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL RK   F+ I   ++ +YVCGPTVY  AH+G+ARP I FD+LYR LR+   + 
Sbjct: 1   MEIYNTLHRKKERFEPIHEPHVGLYVCGPTVYGDAHLGHARPAITFDLLYRYLRHLGYQ- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD+          +DKI ++AR E    P+      +T       V     L
Sbjct: 60  -VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PMEVVQYYLTRYRHAMEV-----L 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKID 171
             L P+ +P A+ HI + I L++ I+  G+AYE+   + FD         YG  S R I+
Sbjct: 113 NVLPPSIEPMASGHIIEQIELVKQILKAGYAYESCGSVYFDVEKYNQDHRYGVLSGRNIE 172

Query: 172 EQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGK 229
           E    TR +  +  K+N  DF LWK + P     W SPWG G PGWH EC+AM   YLG+
Sbjct: 173 EMINNTRRLDGQDEKRNGVDFALWKAAQPEHIMRWPSPWGMGFPGWHCECTAMGRKYLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGG+DL+FPHHE EIAQ+  A +       W+HN  + + G+KM KS GNFIT+ 
Sbjct: 233 EFDIHGGGMDLVFPHHECEIAQA-VASQGHPIVRYWMHNNMITINGQKMGKSLGNFITLE 291

Query: 290 ELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWP 338
           E          +++    IR  +L  HYR  +DF+          ++RL +A  LL    
Sbjct: 292 EFFSGAHPSLNKAYSPMTIRFFILGAHYRGTVDFSNEALEAAEKGLERLLDAAALLDGLK 351

Query: 339 ---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------ 389
               TS   G +      A+ +DLN+   I AL   AR     H+       S       
Sbjct: 352 TADTTSVEVGDLRKRCYDAMNDDLNSPMVIAALFDAARAINAVHNGQGTITPSDLEELRT 411

Query: 390 -------HILGIEVCKEHL-----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                   +LG+  C E       ++    A++ L+  R      K ++++D IR +L +
Sbjct: 412 TFRLFLFDLLGM--CDERASSAGGSEAFGKAMDLLLSIRAEAKARKDWATSDKIRDELTA 469

Query: 438 KGFILEDYKN 447
            GF ++D K+
Sbjct: 470 LGFTIKDTKD 479


>gi|332665290|ref|YP_004448078.1| cysteinyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334104|gb|AEE51205.1| cysteinyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 502

 Score =  256 bits (655), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 147/350 (42%), Positives = 199/350 (56%), Gaps = 28/350 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KIYN+L ++   F+ I P  + MYVCGPTVY   H+GN R  + FD++YR L++ 
Sbjct: 1   MNSELKIYNSLSKEKEVFRPIHPGRVGMYVCGPTVYSNVHLGNCRTFVSFDIVYRYLQFL 60

Query: 61  YGEKCVTYVRNITDI-----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            G K V YVRN+TD+           +DK+ +RAR E    P+      I  K T  F  
Sbjct: 61  -GYK-VRYVRNVTDVGHLEGDVDTGGEDKLGKRARLEELQ-PME-----IAHKYTVGFHD 112

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----YGSF 165
                  L P+ +PRAT HIP+ I ++Q I+ +G+AYE N  + FDT         YG  
Sbjct: 113 MMRVFNVLPPSIEPRATGHIPEQIEMVQQILDNGYAYEVNGSVYFDTLKFAEKDGIYGEL 172

Query: 166 SRRKIDEQKMGTR--VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAM 222
           S RKI++    +R  + ++  K++P+DF +W ++ P     W SPW  G PGWH+ECSAM
Sbjct: 173 SGRKIEDLIAESRNNLKKQDEKRHPSDFAIWIKAAPEHLMHWNSPWSVGFPGWHLECSAM 232

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S+ YLGK FDIHGGG DL FPHHENE+AQ+  A      A  W+H   L L G+KMSKS+
Sbjct: 233 STKYLGKTFDIHGGGNDLKFPHHENEVAQNYGACGC-TPARTWMHGNMLLLNGKKMSKSD 291

Query: 283 GNFITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           GN I   EL   K     + +   V+R  ML THYR  +D +   L  AE
Sbjct: 292 GNSIMPEELFTGKSAHLSKGYTPMVVRFFMLQTHYRSTLDLSDDALQAAE 341


>gi|309789812|ref|ZP_07684391.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308228116|gb|EFO81765.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 397

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 142/385 (36%), Positives = 205/385 (53%), Gaps = 30/385 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R+   F       + +YVCG T YD  HIG+AR  ++FD+L R LR+   E 
Sbjct: 1   MRLYNSLSREKDRFVLPADRPVTLYVCGVTPYDTTHIGHARTFLIFDLLVRFLRWQGAE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N+TD+DD + ERA ++   +   D    + +  T+Q + D   L  + PT+ PR
Sbjct: 60  -VRYCQNVTDVDDPLFERAARD--GVKWQD----LAATQTEQLLADYAALNIIMPTYFPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-----QKMGTRV 179
           A+  I  MI +I+ +I  GHAY     + F   + P++G  +R   DE      + G + 
Sbjct: 113 ASEEIGTMIPIIERLIELGHAYVIEGNVYFSVQTDPDFGKMARMGYDELLAVANQRGNK- 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P+   K++P DF+LW+   P +P W SPWG GRPGWHIECSAM++ YLG   DIHGGG D
Sbjct: 172 PDDPLKRDPLDFVLWQTGKPGDPTWPSPWGPGRPGWHIECSAMATRYLGAQIDIHGGGAD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH  EIAQ            IW+H G + L+G KMSKS GN +   + L+      
Sbjct: 232 LIFPHHPCEIAQIEPVTGKRPFVQIWMHTGLVWLDGEKMSKSLGNLVFARDALKEHS--- 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDF----TVQRLTEAEILLSKWPQTSTSKGIIDP-----A 350
               A  +R  +   HYR+  D+             +L +     S     +DP      
Sbjct: 289 ----ADTLRWYLFSQHYRQEFDYQRAEVANAAEAVALLHTALDAVSGDGAPLDPDASRAE 344

Query: 351 VLSALYNDLNTVSAIQALHKLARES 375
            L+AL +DLNT +A+  LH +AR +
Sbjct: 345 FLAALEDDLNTPTALAVLHLMARNT 369


>gi|228470387|ref|ZP_04055290.1| cysteinyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307969|gb|EEK16852.1| cysteinyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 492

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 177/493 (35%), Positives = 256/493 (51%), Gaps = 59/493 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ IYNTLER    F+ I P ++ +YVCGPTVY   H+G+AR  I FD+L+R L++  G 
Sbjct: 3   QLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHL-GY 61

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           K V YVRN+TD+          +DKI ++A+ E    P+  A   +   +      D+ R
Sbjct: 62  K-VRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLE-PMEVAYYYLNRYH------DSLR 113

Query: 114 LA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
           L   L P+ +P A+ HI + I L+Q I+  G+AY +   + FD     +   YG  S R 
Sbjct: 114 LLNVLPPSIEPLASGHIIEQIQLVQQILDAGYAYVSEGSVYFDVLKYHADHPYGILSGRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  K NP DF LWK++ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 VEDMISNTRELDGQDEKHNPLDFALWKKAQPSHIMRWPSPWSEGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGGLDL FPHHE EIAQ+  A + E     W+HN  + ++G+KM+KS GNFIT
Sbjct: 234 GAHFDIHGGGLDLTFPHHECEIAQA-VASQGEPMVKYWMHNNMITVDGKKMAKSAGNFIT 292

Query: 288 INELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEI-LLS 335
           + E             AP+ IR  +L  HYR  +DF+           QRL +A+  L S
Sbjct: 293 LEEFFTGNHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQS 352

Query: 336 KWPQTSTSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTKNHD------------L 381
             P  +++   ID A     A+ +D+NT   I AL   AR     HD            L
Sbjct: 353 LKPSATSTIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGHEQITSEQLEEL 412

Query: 382 LPIFNASAH-ILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
              ++   H ILG++   E  +      +  + A++ L+  R      K + ++D IR +
Sbjct: 413 RKTYDLYLHDILGMQSATEASDLSGSQQEAFAGAVDLLLDIRSKAKASKDWETSDLIRDK 472

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 473 LTALGFEIQDTKS 485


>gi|229119752|ref|ZP_04249013.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228663653|gb|EEL19232.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 420

 Score =  256 bits (654), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 157/444 (35%), Positives = 230/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYSNLKHR 284

Query: 338 PQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST       K + D      A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILED------TAQGTRWKR 419


>gi|218258486|ref|ZP_03474853.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225458|gb|EEC98108.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
           DSM 18315]
          Length = 492

 Score =  256 bits (654), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 175/493 (35%), Positives = 255/493 (51%), Gaps = 55/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLSIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHRA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        NYG  S 
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESEGSVYFDVEKYNKDHNYGVLSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R ID+    TR  +   +K NP DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIDDMLNTTRALDGQDEKHNPIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + E   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGEDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
           IT++E      K   +++    IR  +L  HYR  +DF+ + L  AE  L +        
Sbjct: 292 ITLDEFFTGDNKMLSQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLMDAYHHL 351

Query: 341 ----STSKGIIDPAVL-----SALYNDLNTVSAIQALHKLAR--ESTKN----------H 379
               +     +D   L      A+ +DLN+   I  L   AR   S K+           
Sbjct: 352 MKLKAADVSTVDVKDLRRKCYDAMNDDLNSPIVIAHLFDAARTINSVKDGKATISLEDLK 411

Query: 380 DLLPIFNASA-HILGIE----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
           +L  +F+     ILG++        + N+    A++ L+  R      K ++++D IR +
Sbjct: 412 ELQDVFHTFIFDILGMKDEAASAGNNSNEAFGKAMDLLLTIRQQAKANKDWATSDKIRNE 471

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 472 LTAIGFEIKDTKD 484


>gi|15806673|ref|NP_295393.1| cysteinyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6459435|gb|AAF11225.1|AE002009_5 cysteinyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 532

 Score =  256 bits (654), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 171/507 (33%), Positives = 253/507 (49%), Gaps = 78/507 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +Y+T++R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R L ++  + 
Sbjct: 52  ITLYDTMQRQKVPFVPGTPGYVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRALTHFGYQ- 110

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YV NITD+          +DK+  RAR E    P+      +  K    F +D   L
Sbjct: 111 -VRYVSNITDVGHLLNDADEGEDKLQARARLEQLE-PME-----VADKYFWSFFRDMDAL 163

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P+  PRAT HI + I LI+ +I  GHAYE+   + FD  S P YG  S RK+D+Q+
Sbjct: 164 NVLRPSINPRATGHIQEQIKLIEELIEKGHAYESAGSVYFDVRSWPEYGKLSGRKLDDQE 223

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            GTR   +  K++P DF LWK++ P     W+SPW  G PGWHIECSAMS  YLG+ FDI
Sbjct: 224 EGTREAVRDEKRDPRDFALWKKAEPEHLMRWDSPWSVGFPGWHIECSAMSLKYLGEGFDI 283

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHE EIAQ+  A      A  W+HN  L + G KMSKS GNF TI ++L 
Sbjct: 284 HGGGLDLQFPHHEAEIAQAEAAG--HHFARYWMHNNMLTIGGEKMSKSKGNFTTIQDIL- 340

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------S 341
                 + +   V+R  ++ +HYR   +   +    A     +  +T            +
Sbjct: 341 ------KKYDPMVVRFLLVSSHYRSVTEMNEEAFASAANGYRRLSETLHEIERRLKDAPA 394

Query: 342 TSKGIIDPAVLS-------ALYNDLNTVSAIQALHKL--------------------ARE 374
            S   +D  + +       A+ +D NT  A+ +L  L                    AR+
Sbjct: 395 GSDTALDSKIAARVTEFEDAMRDDFNTPKAVASLFGLTGELNTALNAGPVGRDTLERARD 454

Query: 375 STKN--HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
           + ++   D+L +F  +     +      +   I   ++ +++ R      K+++ AD +R
Sbjct: 455 AYRSLGGDVLGLFAETGSAASVAQDDASV---IDALMDLVLKARQNYRLQKQYAEADELR 511

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + L   G  +ED K+        RWK+
Sbjct: 512 ETLGKAGITVEDTKDG------ARWKR 532


>gi|198275421|ref|ZP_03207952.1| hypothetical protein BACPLE_01584 [Bacteroides plebeius DSM 17135]
 gi|198271757|gb|EDY96027.1| hypothetical protein BACPLE_01584 [Bacteroides plebeius DSM 17135]
          Length = 493

 Score =  256 bits (654), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 171/492 (34%), Positives = 257/492 (52%), Gaps = 59/492 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ IYNTL RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+++R L +  G 
Sbjct: 5   QLFIYNTLTRKKELFVPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDIVFRYLTHL-GY 63

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           K V YVRNITD+          +DKI ++AR E    P+      +      ++ K    
Sbjct: 64  K-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLLRYHKAMEA 116

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKI 170
           L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +
Sbjct: 117 LNVLPPSIEPHASGHIIEQIKLVEEILKNGYAYESKGSVYFDVAKYNKDHHYGVLSGRNL 176

Query: 171 DEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           D+    TR +  +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG
Sbjct: 177 DDVLNTTRELDGQDEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRKYLG 236

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIHGGG+DL+FPHHE EIAQ+  ++   +    W+HN  + + G+KM KS GNFIT+
Sbjct: 237 ETFDIHGGGMDLVFPHHECEIAQAVASEG-HQMVRYWMHNNMITINGQKMGKSLGNFITL 295

Query: 289 NELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------- 337
           +E    + K   +++    IR  +L  HYR  +DF+ + L  AE  L +           
Sbjct: 296 DEFFTGSNKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGVKNLDRI 355

Query: 338 -PQTSTSKGIIDPAVL-----SALYNDLNTVSAIQAL------------HKLARESTKNH 379
            P  +TS   I+P  L      A+ +DLNT   I  L             K A  +    
Sbjct: 356 TPAKATSG--IEPKGLREKCYEAMNDDLNTPIVISHLFDATRMINTVIDKKAAISAEDLE 413

Query: 380 DLLPIFNASA-HILGIEVCKEH---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           +L  +F+     ILG++   E+     +     ++ L+++R+     K ++++D IR  L
Sbjct: 414 ELKSVFHLFVFDILGLKAEAENNAAREEAYGKVVDMLLEQRMQAKANKDWATSDKIRDNL 473

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 474 AALGFEVKDTKD 485


>gi|15228880|ref|NP_191189.1| tRNA synthetase class I (C) family protein [Arabidopsis thaliana]
 gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
 gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 489

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 160/471 (33%), Positives = 245/471 (52%), Gaps = 60/471 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +YNT+ +    ++ ++P  I +YVCG T YD++HIG+AR  + FD+LYR LR+  
Sbjct: 8   KPDLTLYNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  VTYVRN TD+DDK      +     P++     ++++  ++++ D   L CL PTH
Sbjct: 68  YQ--VTYVRNFTDVDDKAKNCGEK-----PLD-----LSNRFCEEYLLDMAALQCLLPTH 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR ++H+ Q+I +I+ II +G  Y    ++ F     P+YG  S +++D  + G RV  
Sbjct: 116 QPRVSDHMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAV 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF L K +   EP WESPWG GRPGWHIE            FDIHGGG DL 
Sbjct: 176 DSRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIE------------FDIHGGGADLK 223

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG +     KM KS  NF TI ++         +
Sbjct: 224 FPHHENEIAQTCAACE-DSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQI-------AAN 275

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRL-TEAEILLSKWPQTSTSKGIIDPAVLSALYNDL- 359
           +    +R  ++   YR P++++V +L + ++ L S  P      G +     SA   ++ 
Sbjct: 276 YHPLALRHFLMSAQYRSPLNYSVSQLESSSDALYSLSPYREEMSGDVGKTQQSAEAKEMI 335

Query: 360 ----NTVSAIQ-ALHKLARESTKNH-----DLLPIFNASAHILGI----------EVCKE 399
               N +  I  ++ KL +   K        L+ +  A   +L +          E+ K+
Sbjct: 336 KKVKNALKFINVSISKLKKMQKKQRMSLVVSLVEVEKAVREVLDVLGLLTTLSYGELLKD 395

Query: 400 HLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              K ++ A      + + ++ER +  K K F  +D IR+ L  KG  LED
Sbjct: 396 MKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIRELLAFKGIFLED 446


>gi|228925343|ref|ZP_04088439.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931592|ref|ZP_04094498.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228983345|ref|ZP_04143558.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229089221|ref|ZP_04220502.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228694060|gb|EEL47742.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228776335|gb|EEM24688.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228828020|gb|EEM73748.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834265|gb|EEM79806.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 420

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 159/445 (35%), Positives = 231/445 (51%), Gaps = 59/445 (13%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENEIAQS       KT A  W+HNG++N+   KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEAL--TGKTFARYWMHNGYININNEKMSKSLGNFI 230

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK 336
            +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L  
Sbjct: 231 LVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKH 283

Query: 337 WPQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDL 381
             ++ST       K + D      A   A+ +D NT +AI  L+ +A  + +     H  
Sbjct: 284 RMESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTS 343

Query: 382 LPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
             +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  
Sbjct: 344 TVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDD 400

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ +  ILED        + TRWK+
Sbjct: 401 LKDRNIILED------TAQGTRWKR 419


>gi|229182484|ref|ZP_04309735.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228600939|gb|EEK58508.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 420

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 157/444 (35%), Positives = 230/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTGNMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 338 PQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST       K + D      A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILED------TAQGTRWKR 419


>gi|50841867|ref|YP_055094.1| cysteinyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|61216186|sp|Q6AAT0|SYC_PROAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50839469|gb|AAT82136.1| tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|315106472|gb|EFT78448.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 490

 Score =  256 bits (653), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 166/486 (34%), Positives = 240/486 (49%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 17  FKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 70

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 71  CSGYRVTVVANVTDIDDKILAK------SAAAGTPWWAHAYHYENELHAAYKALGCRPPT 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE     
Sbjct: 125 YEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGIRVDEMSPAE 184

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 185 DSDPR-GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIH 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A+ W+HN ++ + G KMSKS GN   ++E+  T
Sbjct: 244 GGGIDLRFPHHENELAQSAAAGR--PFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEV--T 299

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T+  L EA   + +            
Sbjct: 300 KTYSPRA-----VRYFLLAPHYRSMIEFSPSDEGTMGSLDEATKAIERIDSFLDRASNLV 354

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL-----------ARESTKNH-----DL 381
            +  T+   +  A ++A+ +DL T  A+ AL                E+T++H      +
Sbjct: 355 GEQVTASHELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAM 414

Query: 382 LPIFN---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           L +F     +     +    + L   +   +  ++++R      K +++AD IR  L + 
Sbjct: 415 LAVFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNL 474

Query: 439 GFILED 444
           G  +ED
Sbjct: 475 GLTIED 480


>gi|229194480|ref|ZP_04321283.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228588946|gb|EEK46961.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 420

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 159/445 (35%), Positives = 231/445 (51%), Gaps = 59/445 (13%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENEIAQS       KT A  W+HNG++N+   KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEAL--TGKTFARYWMHNGYININNEKMSKSLGNFI 230

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK 336
            +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L  
Sbjct: 231 LVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKH 283

Query: 337 WPQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDL 381
             ++ST       K + D      A   A+ +D NT +AI  L+ +A  + +     H  
Sbjct: 284 RMESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTS 343

Query: 382 LPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
             +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  
Sbjct: 344 TVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDD 400

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ +  ILED        + TRWK+
Sbjct: 401 LKDRNIILED------TAQGTRWKR 419


>gi|298372255|ref|ZP_06982245.1| cysteine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275159|gb|EFI16710.1| cysteine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 488

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 171/490 (34%), Positives = 258/490 (52%), Gaps = 53/490 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ I+NTL R+   F+ ++   + +YVCGPTVY  AH+G+ARP I FD+L R LR+ 
Sbjct: 1   MQHKMYIHNTLSRRKELFEPLNEPFVGLYVCGPTVYGDAHLGHARPAITFDILVRWLRH- 59

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
                V YVRNITD+          +DKI ++AR E    P+      +    T ++   
Sbjct: 60  -NGYRVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQHFTIRYHDA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +PRA+ HI + +  +Q I+ +G+AYE+   + FD         YG  S 
Sbjct: 113 MRALNVLPPSIEPRASGHIIEQMEYVQRILDNGYAYESEGSVYFDVERYNKDHRYGILSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR +  +  K+   DF LWK+++P     W S W  G PGWH+ECSAM   
Sbjct: 173 RNIEDIIENTRELDGQSDKRRSVDFALWKKASPEHIMRWHSKWSDGFPGWHLECSAMGQK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQS  ++   +    W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEKFDIHGGGMDLIFPHHECEIAQSVASNG-HQAVRYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT++E    + K   +++    IR  +L  HYR   DF+ + L+ ++  LS+  +     
Sbjct: 292 ITLDEFFTGSHKLISQAYSPMTIRFFILQAHYRSTADFSDEALSASQKGLSRLFEAYERL 351

Query: 340 ------TSTSKGIIDPAVL--SALYNDLNTVSAIQALHKLARESTKNHD----------- 380
                 T+T+  + D   L   A+ +DLNT   I  L   A+     HD           
Sbjct: 352 QRLSTGTTTTVEMKDWDSLCEEAMNDDLNTPIVIAHLFDAAKVINTVHDGKGSLSQNDID 411

Query: 381 -LLPIFNAS-AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
            L  +F+   + ILG+  E       ++   AI+ ++  RL   + K ++ +D IR +L 
Sbjct: 412 RLKAVFSTYLSDILGLKTEQGDSKYMESYRRAIDLILNLRLEAKQNKNWALSDKIRDELA 471

Query: 437 SKGFILEDYK 446
           S GF+++D K
Sbjct: 472 SYGFVVKDTK 481


>gi|189501179|ref|YP_001960649.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496620|gb|ACE05168.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 484

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 172/492 (34%), Positives = 241/492 (48%), Gaps = 69/492 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R+  EF  +      +YVCGPTVY  AH+G+A+  + FDV  + LR+     
Sbjct: 3   LHIYNSLSRQKEEFIPLHEKIASVYVCGPTVYGHAHLGHAKSYVSFDVAVKWLRHI--GY 60

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VTY++NITD+          +DKI  +AR E    P+      I    T+ +  D  RL
Sbjct: 61  SVTYIQNITDVGHLTDDADEGEDKIARQARLEKTD-PME-----IAQYYTRSYYDDMDRL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-Q 173
               P   P AT HIP+ I LI+ +I  GHAYE N  + F  SS P+YG  S R   E Q
Sbjct: 115 GVDRPNIAPTATGHIPEQIALIEKLIAKGHAYEVNGNVYFSVSSFPDYGKLSGRTDQEAQ 174

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             G RV  +  K++PADF LWK++       W SPW  G PGWH ECSAM+  YLG+  D
Sbjct: 175 HSGVRVESRSEKRHPADFALWKKADSGHIMKWNSPWSTGYPGWHTECSAMAMKYLGETID 234

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG++  FPHHE EIAQS  A   +     W+HN  + + G KM KS  N + + +L 
Sbjct: 235 IHGGGMENKFPHHECEIAQSEAATD-KPYVRYWMHNNMVTVNGTKMGKSLKNSVNLKDLF 293

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKG 345
            T        P  VIR  +L +HYR  +DF+   +  +   L K  +T       +    
Sbjct: 294 TTV-------PPIVIRFFILQSHYRSSLDFSETAIRASRTGLEKLQETWHALLAATPGSE 346

Query: 346 IIDPA-----VLSALYNDLNTVSAIQALHKLAR-----------------ESTKN----- 378
            +D A        A+ +D NT  AI  L  LA+                  S +N     
Sbjct: 347 KLDTAPFEKRFADAMNDDFNTPVAISVLFDLAKAVNTALNSGQGLSEDSLNSCRNIFAAC 406

Query: 379 -HDLLPIFNASAHILGIE--VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
             D+L I +A+    G +    KE L+  +SI ++   Q R    + + F+ +D IR +L
Sbjct: 407 GRDILGIIDAADTGKGGDKTAGKEVLDNVVSILLDLRKQAR----ENRDFALSDLIRDRL 462

Query: 436 ESKGFILEDYKN 447
              G  L+D ++
Sbjct: 463 ADSGVTLKDTRD 474


>gi|296166635|ref|ZP_06849062.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898007|gb|EFG77586.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 469

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 161/475 (33%), Positives = 244/475 (51%), Gaps = 50/475 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWL---M 60

Query: 62  GEKC-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
              C V ++RN+TDIDDKI+ +A         +       +   + F      L  L P+
Sbjct: 61  ARGCDVAFIRNVTDIDDKILNKA------AAADRPWWEWAATYERAFSAAYDALDVLPPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT HI QM+ L++ +I  GHAY A  ++ FD  S P YG  S  KID+   G  V 
Sbjct: 115 AEPRATGHITQMVELMERLIETGHAYPAGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL
Sbjct: 175 TC--KRDQRDFTLWKAAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGPEFDIHCGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  LL+      R
Sbjct: 233 VFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLAIPALLQ------R 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQ------TSTSKGIIDPAV 351
             PA  +R  +   HYR  ++F+   +Q   +A + + ++             G   P  
Sbjct: 285 VRPAE-LRYYLGSAHYRSMLEFSDNALQDAVKAYVGVEEFLHRVRVRVGGVEPGEWTPRF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTK-----NHD-LLPIFNASAHILGIEVC-------- 397
             AL +DL   +A+  +H    E  +     +HD  L    A   ++GI  C        
Sbjct: 344 AEALDDDLAVPAALAEVHHARAEGNRALDSGDHDGALQHARAIRAMMGILGCDPLDERWE 403

Query: 398 -KEHLNKNISIAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++  +  ++ A+E LV+  L       + + ++ AD IR +L+  G  + D  +
Sbjct: 404 TRDETSAALA-AVEVLVRAELENREKAREQRNWALADEIRDRLKIAGIEVTDTAD 457


>gi|229136936|ref|ZP_04265563.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228646474|gb|EEL02681.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 420

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 159/445 (35%), Positives = 231/445 (51%), Gaps = 59/445 (13%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENEIAQS       KT A  W+HNG++N+   KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEAL--TGKTFARYWMHNGYININNEKMSKSLGNFI 230

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK 336
            +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L  
Sbjct: 231 LVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKH 283

Query: 337 WPQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDL 381
             ++ST       K + D      A   A+ +D NT +AI  L+ +A  + +     H  
Sbjct: 284 RMESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTS 343

Query: 382 LPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
             +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  
Sbjct: 344 TVVIQAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDD 400

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ +  ILED        + TRWK+
Sbjct: 401 LKDRNIILED------TAQGTRWKR 419


>gi|269217459|ref|ZP_06161313.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269213080|gb|EEZ79420.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 501

 Score =  256 bits (653), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 161/482 (33%), Positives = 243/482 (50%), Gaps = 62/482 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +KIY++    + +F+ ++P    +Y+CG TV    HIG+ R  + FDVL R LR    +
Sbjct: 29  SLKIYDSAAHSLRDFEPLEPGRAGIYLCGATVQGAPHIGHMRSALAFDVLARWLRRSGYD 88

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  +RN+TDIDDKI+ +      S            +  ++F +    L  L PT++P
Sbjct: 89  --VRMIRNVTDIDDKILRK------SAEAGRPWWEWAYRFEREFSQAYRTLGVLPPTYEP 140

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT HI   I LIQ I+  GHAY  +   + FD +S+P+YGS +R+ +    +     E 
Sbjct: 141 RATGHIADQIELIQAILDAGHAYVGDPGNVYFDVASLPDYGSLTRQSLANMTVDESDVEP 200

Query: 183 YHKKNPADFILWKRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K+NP DF LWK   P EP   +     GRGRPGWHIECSAM+  YLG+ FDIHGGG+D
Sbjct: 201 -DKRNPHDFALWKAPKPGEPATAAWAAPWGRGRPGWHIECSAMAGRYLGETFDIHGGGID 259

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE AQS  A R    A  W+HN ++ +EG KMSKS GN +T+  +        
Sbjct: 260 LRFPHHENEQAQSHAAGR--GFARYWMHNAWVTIEGEKMSKSLGNSLTVEAV-------A 310

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVL- 352
           R  P  ++R A+   HYR  + ++   L EA+ +  +          S   G+ + A L 
Sbjct: 311 REVPPVILRFALGTVHYRSTVAYSPATLAEAQAVWDRLAGFVARAAESEEIGLDEVASLG 370

Query: 353 ---------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------HI 391
                    +A+ +DLN   A+ A+H+     TK +  L   +++              I
Sbjct: 371 PDRLPAEFTAAMDDDLNVSGALAAVHEAV---TKGNTALSERDSAGVRRAQLEVRSMLDI 427

Query: 392 LGIE---------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           LG++            + + K +   +  +++ R      K +++AD +R  L + G ++
Sbjct: 428 LGLDPLSPQWRSGAGSDAVGKALDALVADMLERRAQARAAKDWATADAVRDSLSAAGVVV 487

Query: 443 ED 444
           ED
Sbjct: 488 ED 489


>gi|229153868|ref|ZP_04281998.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629549|gb|EEK86246.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 420

 Score =  256 bits (653), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 157/444 (35%), Positives = 230/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 338 PQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST       K + D      A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTNHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILED------TAQGTRWKR 419


>gi|300775102|ref|ZP_07084965.1| cysteine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506917|gb|EFK38052.1| cysteine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 488

 Score =  256 bits (653), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 174/490 (35%), Positives = 249/490 (50%), Gaps = 56/490 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++KIYN+L  +   F+ I   N+ MYVCGPTVY   H+GN R  + FD +YR L +  G 
Sbjct: 2   QLKIYNSLTAEKEIFKPILEGNVGMYVCGPTVYSNVHLGNVRTFLSFDFIYRTLMHL-GY 60

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           K V YVRNITD           +D+ +++ R E    P+      I  K T  F K    
Sbjct: 61  K-VRYVRNITDAGHLTDDGNVDNDRFVKQTRLEKLE-PME-----IVQKYTVDFHKVLDM 113

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRK 169
              L P  +P AT HI + I L Q +I  G AYE+N  + FD         NYG  S+R 
Sbjct: 114 FNLLPPNIEPTATGHIVEQIELTQKLIERGFAYESNGSVYFDVLEYNKRGLNYGELSKRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           I+E    TR +  +  KKNP DF LWK+++P     W SPWG G PGWH+EC+AMS+ YL
Sbjct: 174 IEELFANTRDLDGQGEKKNPQDFALWKKASPAHIMRWNSPWGEGFPGWHLECTAMSTKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G+ FDIHGGG+DL FPHHE EIAQ   C D      N W+H   L +  ++MSKS GN+I
Sbjct: 234 GETFDIHGGGMDLKFPHHECEIAQGKACND--AAPVNYWMHANMLTMNSQRMSKSTGNYI 291

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ----------RLTEA-EILL 334
              +L+     F  + +   ++R   L  HYR  +D +            RL EA ++L 
Sbjct: 292 LPMQLVTGDNDFFEKPFHPSIVRFCFLQAHYRSVLDISNDAMIASEKGFIRLMEAVKVLN 351

Query: 335 SKWPQTSTSKGI----IDPAVLSALYNDLNT-------VSAIQALHKL--ARESTKNHDL 381
           S  P  +   G            AL +D N+         A++ +  L   +E+    DL
Sbjct: 352 SITPDDTKQSGFNLQEWKNKAYDALTDDFNSPILIAHLFEAVKYIFALNDGKETISTADL 411

Query: 382 LPI---FNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
             +    NA    +LG++  +E+ N+ +   ++ L++ R    K K F  +D IR +L +
Sbjct: 412 EDLKTTLNAFIFDVLGLQTVEENNNEKLDQTLKVLIELRNQARKSKNFELSDQIRDKLLA 471

Query: 438 KGFILEDYKN 447
           +G  L+D ++
Sbjct: 472 EGIELKDGRD 481


>gi|157167844|ref|XP_001662428.1| cysteinyl-tRNA synthetase [Aedes aegypti]
 gi|108871286|gb|EAT35511.1| cysteinyl-tRNA synthetase [Aedes aegypti]
          Length = 526

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 237/461 (51%), Gaps = 58/461 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           I+IY+   R+    Q   P+ I   Y CGPTVYD AHIG+A   +  D+L R+L+ ++G 
Sbjct: 22  IRIYSCRFREKVPLQLPSPARITSFYTCGPTVYDSAHIGHASCYVRLDILQRILKDHFGL 81

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VT + NITDIDDKII RA +      +    + I     Q+F  D  RL    P  + 
Sbjct: 82  RLVTAM-NITDIDDKIIRRAAE------VGKPWTDIARHYEQEFWTDLQRLNVRPPDIKL 134

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T+HIP+++  I+ +I   +AY++++  + F+T++ P YG       ++Q      PE 
Sbjct: 135 RVTDHIPRIVAFIEQLIAKNYAYKSSDGSVYFETANYPQYGKLQNIPTEQQSS----PES 190

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+ ADF LWK + P EP W SP+G GRPGWHIECS +++   G+  D H GGLDL F
Sbjct: 191 --KKSAADFALWKAAKPGEPSWPSPFGLGRPGWHIECSTLATQIFGRQLDFHAGGLDLRF 248

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGR 300
           PHHENE AQSCC   ++   + WIH G L+LEG+  KMSKS  N ++I EL+        
Sbjct: 249 PHHENEEAQSCCYHGVDDWVHYWIHTGQLHLEGQTHKMSKSLKNTVSIGELMG------- 301

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPA 350
            + A   R+  L++HYR  I+F    +T A  +L K          + +     G+ID  
Sbjct: 302 KYSADEFRMLCLLSHYRSVIEFGDDSMTVATNVLKKFRSFFGDCRAYVEGVKPAGMIDSG 361

Query: 351 VLSA------------LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
            L              L ND NT S + +L  LA  ST N  +    +  A I+  E   
Sbjct: 362 ALHGKVQEVDEKIEEFLRNDFNTASVVTSLGDLA--STVNKSINQGNSGDAAIVASE--- 416

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                 +  A+   ++ +  LL + +F   D +RK     G
Sbjct: 417 ----SGVVQAMMNYIRGKFTLLGLLEF---DEVRKTSPGSG 450


>gi|213965076|ref|ZP_03393274.1| cysteinyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952190|gb|EEB63574.1| cysteinyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 471

 Score =  255 bits (652), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 248/477 (51%), Gaps = 60/477 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
            +I++T  R++ +F+ +   +  +Y+CG T     HIG+ R  + FD+L R L  + Y  
Sbjct: 7   FQIFDTATRQLKDFEPLREGHASIYLCGATPQAQPHIGHVRSGVAFDILRRWLIAKGY-- 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN+TDIDDKI+ +A  EH   P  + +S    +  ++F     +L  L P+ +
Sbjct: 65  --DVVFVRNVTDIDDKILNKA-AEH-GRPWWEWVS----RFEREFTWAYNQLGVLPPSVE 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMG- 176
           PRAT H+ QM+  +Q ++ +G AY  +  + FD  +       +YGS S  ++DE + G 
Sbjct: 117 PRATGHVTQMVEYMQRLMDNGFAYAVDGSVYFDVDAWSKAEGSDYGSLSGNRVDEMEQGE 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           T  P    K+   DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIH G
Sbjct: 177 TNTP---GKRGAHDFALWKAAKPGEPSWPTPWGNGRPGWHLECSAMATYYLGSEFDIHCG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENEIAQS  A   +  A  W+HN ++ + G KMSKS GN +++  +L   +
Sbjct: 234 GLDLQFPHHENEIAQSHAAG--DGFARYWMHNHWVTMAGEKMSKSLGNVLSVPHILTMVR 291

Query: 297 FGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI---LLSKWPQTSTSK------GI 346
                   PV +R  +   HYR  ++++ + L EA +    +  +   +  K      G 
Sbjct: 292 --------PVELRYYLGSAHYRSVLEYSEEALQEAAVGYRRIEAFMHRAVDKLGDIEIGE 343

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVC 397
             PA  +AL +DL    A+  +H   R         + TK  ++     A A +LG +  
Sbjct: 344 WTPAFEAALDDDLAVPRALAEIHNAVRGGNQALADGDETKAKEIAGAVRAMAAVLGFDPL 403

Query: 398 KEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            E    +          + + +E  ++ER      K +++AD +R +L+  G  + D
Sbjct: 404 NEQWATSDSGSDAAMHALGVLVEHQLEERTRARAEKDWATADAVRDRLKEAGIEVTD 460


>gi|33242297|ref|NP_877238.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33236808|gb|AAP98895.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 474

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 168/482 (34%), Positives = 245/482 (50%), Gaps = 62/482 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  YNT  +K  E    + + +R+Y CGPTVYD+AHIGN R  +  D+L R L ++    
Sbjct: 9   LYFYNTASQK-KELFFPNHTPVRLYTCGPTVYDYAHIGNFRTYVFEDILKRTLVFF--GY 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITD++DK I  A ++  +IP+ +     T   T+ F +D   L        P 
Sbjct: 66  SVTHVMNITDVEDKTIAGASKK--NIPLQE----YTQPYTEAFFEDLDTLNIARADFYPH 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEK 182
           AT++IPQMI  I  ++  G AY   +  + F  +  PNYG  S   +   +  +R+  ++
Sbjct: 120 ATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISADE 179

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           Y K+NP+DF+LWK   P   G   WESP+G+GRPGWH+ECS M+   LG   DIH GG+D
Sbjct: 180 YDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGGVD 239

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            IFPHHENEIAQS      +  A  W+H+  L ++G+KMSKS GNF+T+ +LL  ++F G
Sbjct: 240 NIFPHHENEIAQSEALSG-KPFARYWLHSEHLLIDGKKMSKSLGNFLTLRDLLH-QEFTG 297

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------SKWPQTS 341
           +      +R  +L +HYR  ++FT + L      L                  S  P+T 
Sbjct: 298 QE-----VRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPRTL 352

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
            S      A   AL NDLN  +   +L     E     D           +L        
Sbjct: 353 DSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKVDT 412

Query: 391 ILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +LG+      VC       I   + +LV ER    K K ++ AD +R ++ + GF++ED 
Sbjct: 413 VLGVLPLTTSVC-------IPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDS 465

Query: 446 KN 447
           K+
Sbjct: 466 KS 467


>gi|15618841|ref|NP_225127.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836465|ref|NP_300989.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752101|ref|NP_445468.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|6831686|sp|Q9Z6X4|SYC_CHLPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4377255|gb|AAD19070.1| Cysteinyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189843|gb|AAF38714.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979306|dbj|BAA99140.1| cysteinyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 474

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 168/482 (34%), Positives = 245/482 (50%), Gaps = 62/482 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  YNT  +K  E    + + +R+Y CGPTVYD+AHIGN R  +  D+L R L ++    
Sbjct: 9   LYFYNTASQK-KELFFPNHTPVRLYTCGPTVYDYAHIGNFRTYVFEDILKRTLVFF--GY 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITD++DK I  A ++  +IP+ +     T   T+ F +D   L        P 
Sbjct: 66  SVTHVMNITDVEDKTIAGASKK--NIPLQE----YTQPYTEAFFEDLDTLNIARADFYPH 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEK 182
           AT++IPQMI  I  ++  G AY   +  + F  +  PNYG  S   +   +  +R+  ++
Sbjct: 120 ATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISADE 179

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           Y K+NP+DF+LWK   P   G   WESP+G+GRPGWH+ECS M+   LG   DIH GG+D
Sbjct: 180 YDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGGVD 239

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            IFPHHENEIAQS      +  A  W+H+  L ++G+KMSKS GNF+T+ +LL  ++F G
Sbjct: 240 NIFPHHENEIAQSEALSG-KPFARYWLHSEHLLIDGKKMSKSLGNFLTLRDLLH-QEFTG 297

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------SKWPQTS 341
           +      +R  +L +HYR  ++FT + L      L                  S  P+T 
Sbjct: 298 QE-----VRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPRTL 352

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
            S      A   AL NDLN  +   +L     E     D           +L        
Sbjct: 353 DSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKVDT 412

Query: 391 ILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +LG+      VC       I   + +LV ER    K K ++ AD +R ++ + GF++ED 
Sbjct: 413 VLGVLPLTTSVC-------IPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDS 465

Query: 446 KN 447
           K+
Sbjct: 466 KS 467


>gi|21228013|ref|NP_633935.1| cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|24418695|sp|Q8PVQ1|SYC_METMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20906443|gb|AAM31607.1| Cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 473

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 171/479 (35%), Positives = 246/479 (51%), Gaps = 55/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R    F+ +    + +Y CGPTVY+  HIGN R  ++ D + R L+Y  G K
Sbjct: 2   LQVYNTLTRNKETFKPLKEGEVSIYACGPTVYNMPHIGNYRTFLLADTVVRTLQYL-GYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  ++    S+         T K + +F K    L     +  PR
Sbjct: 61  -VKLVMNITDIDDKTIRDSKAAGMSL------KDFTDKYSAEFFKGLDMLNIKRASAYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT ++  MI L Q +I  G AYE    + +  S  P+YG  S+   D  ++G  V  ++Y
Sbjct: 114 ATENVDGMIELAQKLIEKGLAYEKGGSVYYRISGFPDYGKLSKLDFDSIRIGASVDVDEY 173

Query: 184 HKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L K S P E      +ESPWG+ RPGWHIECS M+ +  G   D+H GG+D
Sbjct: 174 DKDNPRDFALLKASAPEEIERSIYYESPWGKIRPGWHIECSVMAMNSFGPTLDVHIGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A  I    + WIH   L +EG KMSKS GN  T+ E++E   +GG
Sbjct: 234 LIFPHHENEIAQSEGATGIPFVRH-WIHGEHLIVEGEKMSKSKGNVFTLPEIVEM--YGG 290

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIID---PAV 351
                 V+R   L  HYR+ +D++      A+    K  +T  +     K + D   P  
Sbjct: 291 E-----VVRFMFLSVHYRKKLDYSETFAENAKNNYLKLKETLDNLEFALKNVEDEPGPGD 345

Query: 352 L--------------SALYNDLNTVSAIQALHKLAR------ESTKNHDLL----PIFNA 387
           L               AL +D NT  AI    +L+R      E+ KN  +L     ++  
Sbjct: 346 LETLKTLPELENRFREALEDDFNTPKAITVFRELSRTANVYLETGKNMQVLEEIHALYKR 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  LGI    +   + +   + +LV+ER    K+K + ++D IR++++S G+I++D K
Sbjct: 406 FSDTLGI--FAKAGGEEVPGEVVRLVEEREEARKIKDWKTSDAIREKIKSLGYIVQDTK 462


>gi|260772517|ref|ZP_05881433.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611656|gb|EEX36859.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 397

 Score =  255 bits (652), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 154/417 (36%), Positives = 223/417 (53%), Gaps = 45/417 (10%)

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           +RNITDIDDKII+RA +   S         +T +  Q+   D   L  L P  +PRAT +
Sbjct: 1   MRNITDIDDKIIKRASENQESC------DSLTERLIQEMYTDFDALNILRPDVEPRATAY 54

Query: 129 IPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           I ++I L++ +I  G AY A+N +++F+ S    YG  S++ + + + G RV  +  K++
Sbjct: 55  IEEIIALVERLIDRGFAYVADNGDVMFEVSKFKEYGRLSKQDLTQLQAGARVDIETAKRS 114

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
           P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FPHHEN
Sbjct: 115 PLDFVLWKMSKPGEPTWQSPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHEN 174

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           EIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L+        +    +
Sbjct: 175 EIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDVLQ-------HYDPETV 226

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------LSALYND 358
           R  ++  HYR  ++++ + LT+A   L +         +   A           SA+ +D
Sbjct: 227 RYFLMSGHYRSQLNYSEENLTQARASLERLYTALRGLDMTVAAAGGEEYVSRFTSAMNDD 286

Query: 359 LNTVSAIQALHKLAREST--KNHDLL------PIFNASAHILGIEVCKEHLNKNISIAIE 410
            NT  A   L  +ARE    K  D+L       +    A ++GI   +       S+A +
Sbjct: 287 FNTPEAYSVLFDMAREVNRLKTEDMLQASALGALMRELADVIGILYQEPERFLQSSVAND 346

Query: 411 KLVQERLILLKM-------KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              +E   L+K+       K +++AD  R +L   G ILED      G   T W++K
Sbjct: 347 DQAEEIEALIKLRNDSRANKDWANADLARHKLTEMGIILED------GPNGTTWRRK 397


>gi|325106932|ref|YP_004268000.1| cysteinyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324967200|gb|ADY57978.1| cysteinyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 505

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 174/496 (35%), Positives = 244/496 (49%), Gaps = 69/496 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+ YNTL  ++ EFQ ++P  +RMY CGPTVYDFAHIGN R  +  D++ R L     E 
Sbjct: 3   IQFYNTLNNRLEEFQPLEPGTVRMYSCGPTVYDFAHIGNFRSFLFADLIRRFLEVMGNE- 61

Query: 65  CVTYVRNITDI-------------DDKIIERARQ---------------EHPSIPINDAI 96
            V +V NITD+             +DK+   A++               E+P  P     
Sbjct: 62  -VIHVMNITDVGHMTDDHLADGGGEDKMEAAAKRLKEDKKSGKVPEGAIENPDDPYQ--- 117

Query: 97  SIITSKNTQQFVKDTTRL----ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNE 151
             +    TQ F++D  +L    A   P   P AT HIP+M  +I+ +I   HAY   +  
Sbjct: 118 --VAEYFTQAFLEDARKLGMKIAFEYPERIPHATKHIPEMQQMIEQLIAKDHAYVGPDGA 175

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGT--RVPE--KYHKKNPADFILWKRSTPMEPGWESP 207
           + +   S P YGS S   +D+ + G+  RV E  + +K++PADF+LWK        W+SP
Sbjct: 176 VYYSVESFPEYGSLSGNTLDQLREGSGGRVQEADQVNKRHPADFLLWKPDQSHVMKWDSP 235

Query: 208 WGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           WG+G PGWHIECS M+   LG+   DIH GG DLIFPHHE EIAQS  A      A  W+
Sbjct: 236 WGKGYPGWHIECSVMARLLLGRDTIDIHTGGEDLIFPHHECEIAQSRGASGEGSFARFWM 295

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H  FL +EG KMSKS GNF T+ ++L  K  G    PA V+R  +L +HYR  ++FT + 
Sbjct: 296 HARFLMVEGEKMSKSKGNFYTVRDVLSGKVTGRDVHPA-VLRYELLKSHYRSNMNFTEKG 354

Query: 327 LTEAEILLSKW--------PQTSTSKGIIDPA------VLSALYNDLNTVSAIQALHK-L 371
           L ++   + K          +T      ID +       L+AL +DLN   A+  L   +
Sbjct: 355 LKDSAGAVRKLNEFNQQLQAKTGGKVAEIDNSHPVLAEFLAALSDDLNIAGALGVLFPWM 414

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS-------IAIEKLVQERLILLKMKK 424
              +    + L +      IL +    EH     S       + IE L +        K 
Sbjct: 415 HNNNDAPEEALAVLQTINRILDV-APMEHEQAEESGGAAEGGLDIEALCRGIDEARASKD 473

Query: 425 FSSADYIRKQLESKGF 440
           +  AD +R QL+  G+
Sbjct: 474 WGKADELRNQLQDAGY 489


>gi|240172166|ref|ZP_04750825.1| cysteinyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 468

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/475 (33%), Positives = 237/475 (49%), Gaps = 50/475 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RY 59
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L  R 
Sbjct: 4   RARLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIARG 63

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           +     V ++RN+TDIDDKI+ +A                 +   + F      L  + P
Sbjct: 64  F----DVAFIRNVTDIDDKILNKA------AAAGRPWWEWAATYERAFTAAYDALDVMPP 113

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT HI QMI L++ +I  GHAY  + ++ FD  S PNYG  S  KID+   G  V
Sbjct: 114 SAEPRATGHITQMIELMERLIETGHAYTGDGDVYFDVLSYPNYGQLSGHKIDDVHQGEGV 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+D
Sbjct: 174 AAG--KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARTYLGSEFDIHCGGMD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  +L+  +   
Sbjct: 232 LIFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQRVR--- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK------GIIDPA 350
                P +R  +   HYR  ++F+   +Q    A + +  +     S+      G   P 
Sbjct: 287 ----PPELRYYLGSAHYRSMLEFSDTALQDAVNAYVGVEDFLHRVRSRVGAVLPGEWTPR 342

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--SA-------HILGIEVCKEHL 401
              AL +DL+   A+  +H    E  +  D      A  SA        ILG +   E  
Sbjct: 343 FAEALDDDLSVPIALAEIHHARAEGNRALDAGDHEGALRSAGSIRTMMGILGCDPLDERW 402

Query: 402 NKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                       + + +   ++ R    + + ++ AD IR +L++ G  + D  +
Sbjct: 403 ESRDETTAALAAVDVLVHAELENREKAREQRNWALADQIRDRLKNAGIEVTDTAD 457


>gi|269929418|ref|YP_003321739.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269788775|gb|ACZ40917.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 399

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 148/415 (35%), Positives = 221/415 (53%), Gaps = 43/415 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L ++  EF  ++   +RMYVCG T YD  H+G+A   + FDV+ R  ++  G +
Sbjct: 1   MRLYNSLTQRKEEFTPLNGKTVRMYVCGITPYDTTHMGHAMTYLTFDVINRYCQHL-GWR 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TDIDD I+ +AR+      + +    +  +  +QF +D   +  L P+  PR
Sbjct: 60  -VKYVQNVTDIDDDILRKARE------VGEPWDRLGDRYIRQFQEDLNSINILPPSVYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ-----KMGTRV 179
           A+  IP +I +I  ++  G AY  +  + F  +S P+YG   R   +E      + G   
Sbjct: 113 ASEEIPTIIEMISTLVERGMAYVRDGNVYFRVASDPDYGHLCRCSTEEMIALSAERGAD- 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K+NP DFILW+   P EP W+SPWG GRPGWHIECSAM+  YLG   DIHGGG D
Sbjct: 172 PNDPRKENPLDFILWQAQQPGEPAWDSPWGPGRPGWHIECSAMAYRYLGPQIDIHGGGGD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LI+PHHE+EIAQ+    + E  A  W+H   +  +G KMSKS GN + + ++L       
Sbjct: 232 LIYPHHESEIAQTEAYTQKEPFARFWVHVAMVRYQGEKMSKSLGNLVLVRDVL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-------- 351
           R   A  +RL +L  HYRE  ++        E L     +     G   PA+        
Sbjct: 285 RDHTADALRLYLLSNHYRESFEYQDDGPARFEPLADLLRRAVRLPGGSGPALDVADTHRA 344

Query: 352 -LSALYNDLNTVSAIQALHKL----------ARESTKNHDLLPIFNASAHILGIE 395
              A+ +DL+T + IQ L ++           R+ T+  +LL     +A ILG++
Sbjct: 345 FTDAIGDDLDTPTGIQVLREMGEQVISAAEAGRDVTEARELL---RQAAGILGLQ 396


>gi|229170941|ref|ZP_04298542.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612481|gb|EEK69702.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 420

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 157/444 (35%), Positives = 230/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHR 284

Query: 338 PQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST       K + +      A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILED------TAQGTRWKR 419


>gi|224372980|ref|YP_002607352.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589717|gb|ACM93453.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 464

 Score =  255 bits (651), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 166/475 (34%), Positives = 246/475 (51%), Gaps = 50/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++  ++  +F+ I     R+YVCGPTVYD AH+G+AR  I FD+L R L    G K
Sbjct: 1   MTIYDSHLKQKVDFKPIKEGEARIYVCGPTVYDDAHLGHARSSISFDLLRRTLE-KLGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII +  Q   S      +  IT      +++D   L       +P+
Sbjct: 60  -VTFVKNFTDIDDKIINKMNQTGKS------LKEITEYYIDSYLRDMGALNVKRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  LIQN++  G+AY+  N +I FD S    Y   S +  D++ +  RV  + 
Sbjct: 113 ATESLEAMFDLIQNLLDKGYAYQLPNGDIYFDVSKDEEYCKLSNKCQDDEVV-HRVDTE- 170

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLG----KVFDIHGGGL 238
            K+NPADF LWK     +   ++SP+G+GRPGWHIECSAM   ++        DIHGGG 
Sbjct: 171 GKRNPADFALWKACKGEDDVCFDSPFGKGRPGWHIECSAMIKKHIAYNGEYEIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+ CA   E  A  W+HNGF+ + G KMSKS GN   I + L      
Sbjct: 231 DLFFPHHENEEAQTHCA-YGEHLAKYWMHNGFVQINGEKMSKSLGNSFFIKDAL------ 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDP 349
            + +P  V+R  ++ THYR P++F+ + L  ++  L K  +                 + 
Sbjct: 284 -KHYPGEVLRFYLMSTHYRAPLNFSEEDLIASKKRLDKLYRLKKRIYGLAKKQKDSEFEA 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L A+ +DLN   A+  + +  +E+ +  D           +L        +LGI    
Sbjct: 343 KLLEAMSDDLNISKALAVVDEFVKEANEALDKNPKDKVLKQKILSNIEFINELLGIGGSD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  +  +++     I +L+++R    K K F +AD IR +L S G  ++D  N
Sbjct: 403 AYEYFQAGIDEETKAKINELIEKRTQAKKEKDFETADKIRDELTSMGIQIQDTPN 457


>gi|257068447|ref|YP_003154702.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559265|gb|ACU85112.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 481

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 164/500 (32%), Positives = 247/500 (49%), Gaps = 74/500 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T  R    F  + P  + +YVCGPT     H+G+ R  + FDVL R L     E 
Sbjct: 3   LHLHDTATRTTAPFTPVQPGAVSLYVCGPTTQGDPHLGHLRTFLAFDVLVRWLERSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +      S   + A    + +  ++F     R+    PT++PR
Sbjct: 62  -VAHVRNVTDIDDKILVK------SAEADAAWWAWSLRFEREFQDTLDRIGNRRPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRVPEK 182
           AT H+P+MI L++ +I  GHAY +    + FD +S P YG+ +R+ + D Q  G  +  +
Sbjct: 115 ATGHVPEMIALMERLIERGHAYADGAGSVYFDVASHPGYGALTRQSLEDMQDAGEEM--E 172

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++  DF LWK + P EP    W++P+GRGRPGWH+ECSAM+  YLG+ FDIH GGLD
Sbjct: 173 PGKRDRHDFALWKAAKPTEPETASWDTPFGRGRPGWHLECSAMARKYLGESFDIHAGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE AQS  A      A  W+H+G + ++G KM KS  NF+T    L       
Sbjct: 233 LRFPHHENEQAQSHAAGY--GFAQRWMHSGMVTVDGMKMGKSLDNFVTAARALAEH---- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL--------------LSKWPQTSTSKG 345
              PAP +RLA++  HYR  +++    + EAE +              L   P  +    
Sbjct: 287 ---PAPAVRLALVSGHYRATVEYNATAMREAETVWERFRATAARAAERLEGAPLAAAEAP 343

Query: 346 IID---PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------FNA 387
           + D   PA  +A  +D   ++  +AL  + RE    + LL                   A
Sbjct: 344 LADVELPAEFTAAMDD--DLAVPEALAVVHREQAALNTLLAAPGTAPSAEVTSSLGRLRA 401

Query: 388 SAHILGIEVCKEHLNKNISI------AIEKLVQERL----ILLKMKKFSSADYIRKQLES 437
              +LG++       ++  +      A++ L+  +L         K ++ AD +R  L +
Sbjct: 402 MLDVLGLDPLGAQWGQDQGVSGAEHAALDALISSQLAAREAARAEKDWARADALRDALTA 461

Query: 438 KGFILEDYKNPDNGQRMTRW 457
            G  +ED      GQ   RW
Sbjct: 462 AGIRIED------GQDGARW 475


>gi|228905887|ref|ZP_04069784.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853702|gb|EEM98462.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 420

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 226/444 (50%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------Q 339
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +          +
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 340 TSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
             +S  + D              A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILED------TAQGTRWKR 419


>gi|255507398|ref|ZP_05383037.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525826|emb|CBJ15307.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435406|gb|ADH17584.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296439123|gb|ADH21276.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 497

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/482 (36%), Positives = 245/482 (50%), Gaps = 59/482 (12%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 25  LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 80

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 81  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 134

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 135 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 194

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 195 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGGVDN 254

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 255 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 312

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 313 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 367

Query: 354 A-----------LYNDLNTVSAIQALHKLARE---STKNHDLLPIFNASA--------HI 391
           A           L NDLN  S++ AL    R+   S   H  + I   S+        HI
Sbjct: 368 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQIETDSSVFSKQDAQHI 427

Query: 392 LGIEVCKEHL-------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L +    + +         +I   +  LV++R    K+K +  AD +R ++ S+GF +ED
Sbjct: 428 LALLRKIDQVLGVLPFSQPDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRGFAIED 487

Query: 445 YK 446
            K
Sbjct: 488 GK 489


>gi|215447914|ref|ZP_03434666.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289759738|ref|ZP_06519116.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289715302|gb|EFD79314.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 428

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/390 (37%), Positives = 214/390 (54%), Gaps = 32/390 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRY 59
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R  L R 
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           Y     V ++RN+TDI+DKI+ +A       P  +      + + + F      L  L P
Sbjct: 64  Y----DVAFIRNVTDIEDKILAKAAAA--GRPWWE----WAATHERAFTAAYDALDVLPP 113

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V
Sbjct: 114 SAEPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGV 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+D
Sbjct: 174 AAG--KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN +++  +L+      
Sbjct: 232 LVFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQ------ 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKW-PQTSTSKGIIDPA----- 350
           R  PA  +R  +   HYR  ++F+   +Q   +A + L  +  +  T  G + P      
Sbjct: 284 RVRPAE-LRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPR 342

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD 380
              AL +DL+   A+  +H +  E  +  D
Sbjct: 343 FAEALDDDLSVPIALAEIHHVRAEGNRALD 372


>gi|328949107|ref|YP_004366444.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449431|gb|AEB15147.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 510

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/516 (32%), Positives = 249/516 (48%), Gaps = 88/516 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ RKI EF  I    +  Y CGPTVY++AHIGN R  +  D L R L +   +K
Sbjct: 3   LRLYNTMGRKIEEFVPIHEGFVGFYGCGPTVYNYAHIGNLRAYVFLDTLDRTLTFLGYDK 62

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
              +V NITDI          +DK+++ A++ H S+        +    T  F  D  RL
Sbjct: 63  --KHVMNITDIGHLTGDADEGEDKMLKTAQERHQSVLE------VAKFYTDAFFNDIDRL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P    +AT H+  MI LI+ I  +GH Y +   + +D ++ P+YG  +   +D+ K
Sbjct: 115 NIIRPDVVCKATEHVQDMIELIKRIEANGHTYMSGGNLYYDVTTYPDYGKLANLNLDDLK 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G R+    +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+ F
Sbjct: 175 AGARIEVDQNKRNPYDFVLWFTKSKFENQALTWDSPWGRGYPGWHIECSAMSMKYLGEHF 234

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL----------EGRKMSKS 281
           DIH GG+D I  HH NEIAQS  A    K  N W+HN FL +          +  KMSKS
Sbjct: 235 DIHTGGIDHIPIHHTNEIAQSEGATG-HKWVNYWLHNEFLVIAKDKKAAESGQAEKMSKS 293

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKW 337
           +GNF+T+  L++      + +     R  +L  HYR+ I F+   +  A+     L+ + 
Sbjct: 294 HGNFLTLQSLID------KGYNPLDYRFFLLGGHYRKQIYFSWDAMDSAKNSRTALVQRV 347

Query: 338 PQTSTSKGIIDPAVLSALY---------------------------NDLNTVSAIQALHK 370
            + + + G  D    S +Y                           NDL+T  A+  + K
Sbjct: 348 ARLAQNAGGADSLNYSKIYSKGEACKTENLSEKAKEYIEKFQAALENDLSTPVALSCIQK 407

Query: 371 LARE-STKNHDLLPIFNASAHILGIEVCK------------------EHLNKNISIAIEK 411
             ++ S K  + L +      ++G+ + K                  +H     +  I+ 
Sbjct: 408 AVKDGSLKPEESLELVRRMDSVIGLNLVKSAADFLAEQEKEKKASVPDHSGDPEAQEIDA 467

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           LV ER+   K K F+ AD IR  L S+G I+ D  N
Sbjct: 468 LVAERVEAKKAKNFARADEIRNMLSSRGIIITDTPN 503


>gi|166154124|ref|YP_001654242.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166154999|ref|YP_001653254.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335362|ref|ZP_07223606.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|165930112|emb|CAP03595.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165930987|emb|CAP06549.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 497

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/485 (35%), Positives = 243/485 (50%), Gaps = 65/485 (13%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 25  LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 80

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 81  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 134

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 135 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 194

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 195 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSMSLLGQSLDIHAGGVDN 254

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 255 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 312

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 313 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 367

Query: 354 A-----------LYNDLNTVSAIQALHKLARESTKNHD---------------------L 381
           A           L NDLN  S++ AL    R+   + D                     +
Sbjct: 368 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQHI 427

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+GF 
Sbjct: 428 LALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRGFA 484

Query: 442 LEDYK 446
           +ED K
Sbjct: 485 IEDGK 489


>gi|255349180|ref|ZP_05381187.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503717|ref|ZP_05382107.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 500

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 174/482 (36%), Positives = 245/482 (50%), Gaps = 59/482 (12%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 28  LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 83

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 84  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 137

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 138 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 197

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 198 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGGVDN 257

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 258 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 315

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 316 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 370

Query: 354 A-----------LYNDLNTVSAIQALHKLARE---STKNHDLLPIFNASA--------HI 391
           A           L NDLN  S++ AL    R+   S   H  + I   S+        HI
Sbjct: 371 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQIETDSSVFSKQDAQHI 430

Query: 392 LGIEVCKEHL-------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L +    + +         +I   +  LV++R    K+K +  AD +R ++ S+GF +ED
Sbjct: 431 LALLRKIDQVLGVLPFSQPDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRGFAIED 490

Query: 445 YK 446
            K
Sbjct: 491 GK 492


>gi|256419903|ref|YP_003120556.1| cysteinyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034811|gb|ACU58355.1| cysteinyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 499

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 179/504 (35%), Positives = 253/504 (50%), Gaps = 75/504 (14%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++KIYN+L R+   F ++ P ++ MYVCGPTV   +H+G+ARP I FDV+YR L++  G 
Sbjct: 3   ELKIYNSLHRQKEVFTSLYPGHVGMYVCGPTVSGESHLGHARPYITFDVVYRYLQFL-GY 61

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           K V YVRNITD           +DKI +RA+ E    P+      +  K T  F     R
Sbjct: 62  K-VRYVRNITDAGHFEEEGREAEDKIAKRAQLEKLE-PME-----LVQKYTNLFHWAFLR 114

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKI 170
             CL P+ +P AT HI + I +I+ I+  G+AYE+N  + FD        +YG  S R +
Sbjct: 115 FNCLEPSIEPTATGHIVEQIEMIKTIMEKGYAYESNGSVYFDVKKYAESHDYGILSGRVL 174

Query: 171 DE--QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           ++  +     +  +  K N  DF LWK + P     W SPWG G PGWHIECSAMSS YL
Sbjct: 175 EDMLESSNRELDGQEEKINNVDFALWKNAPPEHIMRWPSPWGEGFPGWHIECSAMSSKYL 234

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           GK FDIHGGG+DL FPHHE EIAQS  A   E  A  W+HN  + + GRKM K+  N I 
Sbjct: 235 GKQFDIHGGGMDLQFPHHECEIAQSEIAHG-ELMARYWMHNNMITINGRKMGKAYNNTIK 293

Query: 288 INELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK 336
           + EL         +++    IR  +L THYR  +DF+          +QRL  A  +L K
Sbjct: 294 LTELFTGNHHLLEKAYSPMTIRFFILQTHYRSTLDFSNEALQAAEKGLQRLWAAFEVLQK 353

Query: 337 WPQTSTSKGI---IDPAVL-------SALYNDLNTVSAIQAL-----------------H 369
              T+ ++ I   +D  V          + +D NT   +  L                 H
Sbjct: 354 LSYTADAQPINEELDKQVRQWCLECEEFISDDFNTAKVLANLFELSPVINSIKGGQVKMH 413

Query: 370 KLARES------TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           +L+ E+      T  + L+ I       L  +      N  +   I+ L++ R      K
Sbjct: 414 ELSEETFQLLKKTWQNFLIDILGLQPETLATD------NSKLDGVIQLLMEMRKEAKGRK 467

Query: 424 KFSSADYIRKQLESKGFILEDYKN 447
            ++++D IR QL + G  L+D K+
Sbjct: 468 DYAASDKIRNQLLAVGIQLKDEKD 491


>gi|189347672|ref|YP_001944201.1| cysteinyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341819|gb|ACD91222.1| cysteinyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 484

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 170/494 (34%), Positives = 241/494 (48%), Gaps = 75/494 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R    F+ + P  + MYVCGPTVY  AH+G+A+  + FDV+ R LR   G +
Sbjct: 3   LQIYNSLSRSKETFEPVHPGVVGMYVCGPTVYGHAHLGHAKSYVSFDVVARWLRQS-GYR 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YV+NITD+          +DKI  +AR E    P+      I    T+ F  D  RL
Sbjct: 62  -VRYVQNITDVGHLSDDADEGEDKIARQARLEKTD-PME-----IAQFYTRSFYDDMDRL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ- 173
               P   P AT H+P+ I LI+ ++   HAY  N  + F   S P+YG  S R   E  
Sbjct: 115 GVERPNIAPTATGHVPEQIALIRQLVGSSHAYVVNGNVYFSVQSFPDYGKLSGRTDQEAL 174

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGK 229
           + GTR+  +  K++P+DF LWK++   E G    WESPWG G PGWH+ECSAMS  YLG+
Sbjct: 175 QSGTRIEVRNEKRHPSDFALWKKA---EEGHIMKWESPWGTGYPGWHVECSAMSMKYLGE 231

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIHGGG++  FPHH+ EIAQS  A         W+HN  + + G KM KS  N + + 
Sbjct: 232 TVDIHGGGMENKFPHHDCEIAQSEAATG-RPYVRYWMHNNMVTVGGIKMGKSLKNSVNLK 290

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTST 342
           +L        R     VIR  +L +HYR P+D++   +  +   L K         +T  
Sbjct: 291 DLF-------RETDPMVIRFFILQSHYRSPLDYSEAAIRASSAGLEKLQDTRQRLQKTRP 343

Query: 343 SKGIIDPAVLS-----ALYNDLNTVSAIQALHKLARESTKNHD----------------- 380
             G  D    +     A+ +D NT  AI  L   ++      D                 
Sbjct: 344 GTGNFDSTAFTERFTAAMDDDFNTPLAISILFDFSKSVNSALDKQEGLSADSIAEAAAFL 403

Query: 381 ------LLPIFNASAHILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                 +L I +AS    G   E  ++ L K ISI ++  ++ R    K K F+ +D IR
Sbjct: 404 DTFAGKVLGIVSASDEASGHASENSRQTLEKTISILLDMRIEAR----KNKDFALSDRIR 459

Query: 433 KQLESKGFILEDYK 446
            +L   G  ++D +
Sbjct: 460 DRLLEAGVEVKDTR 473


>gi|229015492|ref|ZP_04172490.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021701|ref|ZP_04178283.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739569|gb|EEL89983.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745779|gb|EEL95783.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 420

 Score =  254 bits (650), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/445 (35%), Positives = 228/445 (51%), Gaps = 59/445 (13%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENEIAQS       KT A  W+HNG++N++  KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEAL--TGKTFARYWMHNGYINIDNEKMSKSLGNFI 230

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------- 338
            +++++       + +   +IR  ML  HYR PI+F+ + L      L +          
Sbjct: 231 LVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKH 283

Query: 339 QTSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK----NHDL 381
           +  +S  + D              A   A+ +D NT +AI  L+ +A  + +     H  
Sbjct: 284 RMESSTDLTDHNEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTS 343

Query: 382 LPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
             +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  
Sbjct: 344 KVVIGAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDD 400

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ +  ILED        + TRWK+
Sbjct: 401 LKDRNIILED------TAQGTRWKR 419


>gi|110598118|ref|ZP_01386396.1| cysteinyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340250|gb|EAT58747.1| cysteinyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 481

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/488 (33%), Positives = 245/488 (50%), Gaps = 67/488 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC- 65
           IYN+L R   +F+ + P  + +YVCGPTVY  +H+G+A+  + FDV+ R LR+     C 
Sbjct: 5   IYNSLSRTKEQFEPLHPGFVSIYVCGPTVYGHSHLGHAKSYVSFDVVVRWLRH-----CG 59

Query: 66  --VTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V YV+NITD+          +DKI+++AR E    P+      I    T+ F +D  R
Sbjct: 60  YQVKYVQNITDVGHLTDDADEGEDKIMKQARLEKTD-PME-----IAQFYTRSFYEDMDR 113

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKIDE 172
           L  L P   P AT HIP+ I LI+ ++  GHAYE N  + F   S P YG  S R  ++ 
Sbjct: 114 LGILRPNIAPAATAHIPEQIALIERLVETGHAYEVNGNVYFSVESFPGYGRLSGRTDMEA 173

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           Q+ G RV  +  K++ +DF LWK++       W SPWG G PGWH+ECSAMS  YLG+  
Sbjct: 174 QQSGNRVEVRSEKRHTSDFALWKKAEENHLMKWRSPWGTGYPGWHLECSAMSMKYLGETI 233

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG++  FPHHE EIAQ+      +     W+HN  + + G KM KS  N + + EL
Sbjct: 234 DIHGGGMENKFPHHECEIAQAESVTG-KPYVRFWMHNNMVTVNGIKMGKSLKNSVNLKEL 292

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKG- 345
             T       +   VIR  +L +HYR P+DF+   +  ++  L K  +T      T+ G 
Sbjct: 293 FST-------FDPIVIRFFILQSHYRSPLDFSDVAIRASQTGLEKLHETYRRLMETNSGS 345

Query: 346 ---IIDPAVL---SALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLPIFN 386
               ++P +     A+ +D NT  A+  L   A+             E+ +      +  
Sbjct: 346 GMFAVEPYLDRFNDAMNDDFNTPIAVSVLFDCAKALNTALDRSEGVSETAREEAGKFLAM 405

Query: 387 ASAHILGI--------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           A   +LGI        +   E   K +   +  +++ R    K K F+ +D +R +L   
Sbjct: 406 AGTEVLGILQPRGSSGDKQSEETGKALEGVMALILELRAEARKNKDFALSDKLRDRLLEA 465

Query: 439 GFILEDYK 446
           G  ++D K
Sbjct: 466 GIEIKDTK 473


>gi|196232145|ref|ZP_03131000.1| cysteinyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196223867|gb|EDY18382.1| cysteinyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 466

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 168/478 (35%), Positives = 248/478 (51%), Gaps = 58/478 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYY 60
           I+++NT  R++ EF  +DP+   ++MY CGPTVY+ AHIGN R  +  D+L R L  R Y
Sbjct: 3   IRLFNTYTRQLEEFTPLDPAGQQVKMYTCGPTVYNHAHIGNFRAYLFEDLLQRHLEARGY 62

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E+    V N+TD+DDK I  +R+          ++  T+     F +D   L      
Sbjct: 63  QVER----VMNLTDVDDKTIRNSRE------AGRRLADFTAIYKDAFFQDVDTLRIKRAQ 112

Query: 121 HQPRATN--HIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGT 177
           H P AT   +I +MI +IQ +   G AY+A ++ + F  S  P+YG  +   +DE +   
Sbjct: 113 HFPAATEPRYIERMISMIQQLESQGIAYQAEDKSVYFRLSKFPDYGKLAHLNLDELRPSG 172

Query: 178 RVP-EKYHKKNPADFILWKR--STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+  ++Y K++  DF LWK       +  W+SPWGRGRPGWHIECSAM++  LG   DIH
Sbjct: 173 RIANDEYEKESIGDFALWKAWDEKDGDVAWDSPWGRGRPGWHIECSAMATALLGPEIDIH 232

Query: 235 GGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GG+D IFPHHE EIAQS CC  +  K    W+H   L ++G+KMSK  GNF T+ +L+E
Sbjct: 233 CGGVDNIFPHHEAEIAQSECCTGK--KFVRYWLHCAHLMVDGQKMSKKLGNFYTLRDLIE 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQ----------- 339
            K F GR       R A+L  +YR P++FT+  L  A   L++   W             
Sbjct: 291 -KGFTGRE-----ARYALLTVNYRLPLNFTLPGLESARASLARIDEWVDRLTAHAAGASP 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES-----------TKNHDLLPIFNAS 388
           T+T          +AL  DLN   A+  L  L RES            +   LL  +   
Sbjct: 345 TATPLSDFTEKFFAALDEDLNISGALAPLFDLIRESNSALNRSELSPAEAAQLLADWRRI 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             +LG E     +  ++   +E+  Q R      K++  +D +R ++ +KG++++D K
Sbjct: 405 DSVLGFEREAAAIPADVLALVEQRQQAR----ADKEWKKSDELRDEILAKGWVVKDTK 458


>gi|89890596|ref|ZP_01202106.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517511|gb|EAS20168.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 494

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 175/491 (35%), Positives = 254/491 (51%), Gaps = 62/491 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+++YN+L  +   F++I+   + MYVCGPTVY   H+GN R  I FD++YR L++  G
Sbjct: 7   QKLQLYNSLTGEKEIFKSINEGLVGMYVCGPTVYSNVHLGNCRTFISFDMIYRYLQHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +DKI ++AR E    P+      I  + T  F     
Sbjct: 66  YK-VRYVRNITDAGHLTDDADEGEDKISKKARVEKLE-PME-----IVQQYTLDFHNVLN 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRK 169
           +   L P  +P AT HI + I +I+ II +G+AYE N  I F+         YG  S RK
Sbjct: 119 KFNNLPPNIEPTATGHIVEQIEIIKTIIDNGYAYERNGSIYFNVLKFNEDHEYGKLSGRK 178

Query: 170 IDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR  + +  K NP DF LWK+++P     W SPWG G PGWH+EC+ MSS YL
Sbjct: 179 LEDMIANTRALDAQSEKDNPQDFALWKKASPAHIMRWPSPWGDGFPGWHLECTVMSSKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DL FPHHE EIAQ   A       N W+H   L L G+KMSKS GN I 
Sbjct: 239 GETFDIHGGGMDLKFPHHECEIAQGEAA-HGHSPVNYWLHANMLTLNGKKMSKSTGNSIL 297

Query: 288 INELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------- 339
             EL      F  +++   V+R  M+  HYR  +DF+   +  AE   ++  +       
Sbjct: 298 PEELFTGDNDFMEKAFSPSVVRFFMMQAHYRSVLDFSNDAILAAEKGFNRLSEAIKTIDD 357

Query: 340 -TSTSKGIID-PA----VLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLL 382
            T + +  ID PA      +A+ +D N+   I  L + A+            +  + +L+
Sbjct: 358 LTPSKESSIDVPAWVERCYAAMNDDFNSPILIAELFEGAKMIHAVKEGKQTATAGDTELI 417

Query: 383 -PIFNASAH-ILGIEVC-------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
              FNA  + +LG+E          +HL+  + + I+   Q R      K ++++D IR 
Sbjct: 418 KETFNAFFYDVLGLETASKTGSTDSKHLDGAMQLIIDLRTQAR----ANKDWATSDQIRD 473

Query: 434 QLESKGFILED 444
           QL + G  L+D
Sbjct: 474 QLVAAGIQLKD 484


>gi|76789524|ref|YP_328610.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803212|ref|YP_002888406.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805133|ref|YP_002889287.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76168054|gb|AAX51062.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273433|emb|CAX10348.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274446|emb|CAX11241.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436332|gb|ADH18506.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296438191|gb|ADH20352.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140692|gb|ADH97450.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 497

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 171/485 (35%), Positives = 243/485 (50%), Gaps = 65/485 (13%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 25  LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 80

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 81  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 134

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 135 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 194

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 195 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGGVDN 254

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 255 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 312

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 313 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 367

Query: 354 A-----------LYNDLNTVSAIQALHKLARESTKNHD---------------------L 381
           A           L NDLN  S++ AL    R+   + D                     +
Sbjct: 368 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQHI 427

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+GF 
Sbjct: 428 LALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRGFA 484

Query: 442 LEDYK 446
           +ED K
Sbjct: 485 IEDGK 489


>gi|288800463|ref|ZP_06405921.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332676|gb|EFC71156.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 497

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 173/496 (34%), Positives = 251/496 (50%), Gaps = 59/496 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+++ IYNTL RK   F+ ++  N+ MYVCGPTVY   H+G+ARP I FD+L+R L++  
Sbjct: 3   KQQLVIYNTLSRKKETFEPLNAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLKHL- 61

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD+          DDKI ++AR E    P+      I    T ++    
Sbjct: 62  GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHDAM 114

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRR 168
             L  L P+ +P+AT HI +   L++ I+ +G AYE+N  I FDT+       YG  S R
Sbjct: 115 NALNVLPPSIEPQATGHIIEQEQLVKEIMDNGFAYESNGSIYFDTAKYNQKYRYGKLSGR 174

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +D+    +R +     K+N  DF LWK++TP     W S W  G PGWH EC+AM   Y
Sbjct: 175 NLDDVINASRELGGVEDKRNQTDFALWKKATPEHIMKWPSSWSEGFPGWHCECTAMGRKY 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG+DL+FPHHE EIAQ+  A +       W+HN  + + G+KM KS GNFI
Sbjct: 235 LGSNFDIHGGGMDLMFPHHECEIAQA-VASQGHDMVRYWMHNNMITINGKKMGKSLGNFI 293

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           T+ E  + T +   +++    IR  +L  HYR  +DF+ + L  AE  L++         
Sbjct: 294 TLEEFFKGTHEALTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGLNRLLSGIKDLD 353

Query: 346 IIDPA-----------------VLSALYNDLNTVSAIQALHK--------LARESTKNHD 380
            I PA                   +A+ +DL T   I  L +        +  + T + +
Sbjct: 354 RIQPANESDKATATFVKECRSRCYNAMNDDLQTPVVISILFEACHIINTIVDHKGTISSE 413

Query: 381 LLPIFNASAH-----ILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSADYI 431
            L     + H     ++G+       N+    A  K+V   L L       K ++++D I
Sbjct: 414 DLAELKETMHLFAFDLMGLRAENSDNNQAREEAYGKVVDMVLDLRSKAKADKDWATSDKI 473

Query: 432 RKQLESKGFILEDYKN 447
           R  L   GF ++D K+
Sbjct: 474 RDMLADAGFEVKDTKD 489


>gi|228937392|ref|ZP_04100038.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228976848|ref|ZP_04137260.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782818|gb|EEM30984.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228822225|gb|EEM68207.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 420

 Score =  254 bits (649), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 226/444 (50%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------Q 339
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +          +
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 340 TSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
             +S  + D              A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILED------TAQGTRWKR 419


>gi|330836349|ref|YP_004410990.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748252|gb|AEC01608.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 478

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 165/479 (34%), Positives = 237/479 (49%), Gaps = 54/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
             +YNT+ R I EFQ I+   + MY CGPTVY++AHIGN R  +  DVL R+L Y     
Sbjct: 3   FSVYNTMSRTIEEFQPIEEGKVGMYCCGPTVYNYAHIGNLRTYVFEDVLRRVLSY--AGY 60

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V +V NITD+          +DK+++ AR++  S+        I S  T  F +D   L
Sbjct: 61  NVKHVMNITDVGHLTDDGDAGEDKMLKSAREKGMSV------WDIASFYTDAFFRDFDAL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS--RRKIDE 172
             + P    +AT+H+ QMI LIQ +   GH Y A   + F   + P+YG  +     +DE
Sbjct: 115 GNMRPQIICKATDHVQQMITLIQKLEEGGHTYAAGGNVYFSIDTFPDYGKLAGLHLHMDE 174

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGK 229
            K G R+     K+NP DF+LW  ++        W+SPWGRG PGWHIECSAMS  YLG 
Sbjct: 175 LKAGARIEVDTFKRNPKDFVLWFTNSKFGEQAMMWDSPWGRGYPGWHIECSAMSMTYLGD 234

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+H GG+D I  HH NEIAQS  A         W+H  FL  +  KMSKS+G+F+T+ 
Sbjct: 235 KFDLHCGGIDAIPVHHTNEIAQSEAATGDHPWVKYWMHGEFLLNDTGKMSKSSGSFLTLQ 294

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            L++      + +     R   L  HYR  + F+ + L  A      L+ +  +     G
Sbjct: 295 VLID------KGYEPLDYRFFCLGAHYRTQLRFSWEALDGARSSRRNLVGRIGRLKAEAG 348

Query: 346 IIDPA-----------VLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHILG 393
           I  P                ++NDLN   A+  +  L + +S    D L +      I G
Sbjct: 349 IPSPQPGETASGYLANFTEQIFNDLNMPRALAVMWGLLKDDSVSAADKLAVLLEMDKIFG 408

Query: 394 IEVCKEHLNKNISIAIE--------KLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   K    ++ S  +E        +LV+ R    K + F++AD +R +LE  G+I+ D
Sbjct: 409 LSFDKVQPQED-STPVEGADDPEALELVRLRAEAKKSRDFATADRLRAKLEGIGYIVTD 466


>gi|282890732|ref|ZP_06299252.1| hypothetical protein pah_c026o057 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499325|gb|EFB41624.1| hypothetical protein pah_c026o057 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 489

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 169/479 (35%), Positives = 243/479 (50%), Gaps = 61/479 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NT E+++ E    +   I +Y CGPTVY+FAHIGN R  +  D+L R L+++ G K
Sbjct: 18  IQLFNT-EKRVKETLVAEKGQITLYTCGPTVYNFAHIGNFRTYVFEDLLRRTLKFF-GLK 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N+TD+DDK I+ A      I     ++  T      F +D   L        P 
Sbjct: 76  -VKQVMNLTDVDDKTIKGA------ISKGITLNAFTQPYKDAFFQDLATLHIEPAEVYPA 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT++I  MI +IQ +I  G AY+  +  I +     P YG  S  K+DE K+G       
Sbjct: 129 ATDYIQPMIEMIQTLIDKGFAYKGQDGSIYYAIRKFPRYGCLSHLKLDELKVGASERVAA 188

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K+N +DF+LWK   P   G   W+SP+G GRPGWH+ECSAM+   LG   DIH GG
Sbjct: 189 DEYDKENVSDFVLWKNYDPQRDGKIYWDSPFGPGRPGWHLECSAMAMQLLGDTIDIHVGG 248

Query: 238 LDLIFPHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           +D +FPHHENEIAQS  C      K    W+H   L ++G+KMSKS GNF T+ +LL  K
Sbjct: 249 VDNMFPHHENEIAQSEACSGKTFVKH---WMHAEHLIVDGKKMSKSMGNFYTLRDLL-AK 304

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGI 346
            F G       +R  +L THY+  ++FT + L      L +           + S   G 
Sbjct: 305 GFSGVE-----VRYMLLQTHYKTQLNFTFEGLDAVRHSLRRVQDFIRRVQEIKGSADSGS 359

Query: 347 IDPAVLSALY-------NDLNTVSAIQALHKLAR--------------ESTKNHDLLPIF 385
           + P +   LY       +DLN   A+ AL ++ R              E+ +  + L   
Sbjct: 360 VAPVIERTLYAFAKALADDLNISVALAALFEMIREINTLCDKGLVGDSEAAEILEFLQKI 419

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N    I   EV  E + + +  A+E    +R I  + K +S AD +R  + S G+I+ED
Sbjct: 420 NQVLAIFTFEVQAEQIPQELQDALE----QRNIARQNKNWSEADRLRDLIHSHGYIIED 474


>gi|194335476|ref|YP_002017270.1| cysteinyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194307953|gb|ACF42653.1| cysteinyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 484

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 176/488 (36%), Positives = 249/488 (51%), Gaps = 67/488 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYN+L R   +F+ + P  + MYVCGPTVY  AH+G+A+  + FDV+ R LR+  G + V
Sbjct: 5   IYNSLGRTKEKFEPLHPPIVTMYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHS-GYR-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            YV+NITD+          +DKI ++A  E    P+      I+   T+ F +D  +L  
Sbjct: 63  KYVQNITDVGHLTDDADEGEDKISKQALLEKTD-PME-----ISQFYTRSFYEDMDKLEV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ-KM 175
           L P   P AT HIP+ I LI+ +I  GHAYE +  + F   S P YG  S R   E  + 
Sbjct: 117 LRPNIAPAATAHIPEQIELIERLIDAGHAYEVHGNVYFSVESFPGYGKLSGRTDQEAVQS 176

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVF 231
           G RV  +  K++P+DF LWK++   E G    W SPW  G PGWH+ECSAMS  YLG+  
Sbjct: 177 GIRVGVRSEKQHPSDFALWKKA---EEGHLMKWNSPWSIGYPGWHLECSAMSMKYLGETI 233

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG++  FPHH+ EIAQS      +     W+HN  + + G KM KS  NFI + +L
Sbjct: 234 DIHGGGMENKFPHHDCEIAQSESVTG-KPYVRFWMHNNMVTVNGIKMGKSLKNFINLKDL 292

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSK 344
                    S+   VIR  +L +HYR P+DF+   +  ++  L K  +T       +   
Sbjct: 293 F-------LSFDPMVIRFFILQSHYRSPLDFSDAAIRASQTGLEKLRETQRRLREQTPGS 345

Query: 345 GIIDPA-----VLSALYNDLNTVSAIQALHKLAR------ESTKNHDLLPIFNASA--HI 391
           G  D A        A+ +D NT  AI  L  L++      + T++   LP   A+A   +
Sbjct: 346 GDFDTAPFIQRFTEAMDDDFNTPIAISVLFDLSKSINAALDRTESISELPQQEAAAFLDL 405

Query: 392 LGIEVC------------KEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            G E+              E LN K +   ++ L+  R    K K F+ +D IR QL   
Sbjct: 406 AGREILCILQHDNQSGSRNEELNGKRLDGVMDILLDLRAEARKSKDFALSDKIRDQLLVA 465

Query: 439 GFILEDYK 446
           G  ++D K
Sbjct: 466 GIEIKDTK 473


>gi|150024693|ref|YP_001295519.1| cysteinyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|187629821|sp|A6GX80|SYC_FLAPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149771234|emb|CAL42703.1| Cysteine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 495

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 184/493 (37%), Positives = 245/493 (49%), Gaps = 60/493 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + IKIYN+L  +   F  I+  NI MYVCGPTVY   H+GN R  + FDV+YR    + G
Sbjct: 7   QSIKIYNSLSGEKEIFSPINEGNIGMYVCGPTVYSNVHLGNVRTFMSFDVIYRYF-LHLG 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V Y+RNITD+          +DKI ++A+ E    P+      I  + T  F     
Sbjct: 66  YK-VRYIRNITDVGHIVDDVDHGEDKIAKKAKLEQLE-PME-----IVQRYTVDFHNVLK 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
               L P+ +P AT HI + I +++ II  G  YE+N  + FD        +YG  S R 
Sbjct: 119 AYNLLPPSIEPTATGHIIEQIEIVKTIINKGIGYESNGSVYFDVVKFNESNHYGKLSGRN 178

Query: 170 IDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           I++    TR  + +  K+N  DF LWK++ P     W SPW  G PGWH+EC+AMS+ YL
Sbjct: 179 IEDMLANTRDTDGQSDKRNHQDFALWKKAEPEHIMRWPSPWSDGFPGWHLECTAMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQ--SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           G  FDIHGGG+DL FPHHE EIAQ  +C     ++  N W+H   L L G+KMSKS GN 
Sbjct: 239 GSHFDIHGGGMDLKFPHHECEIAQGEACTG---QEPVNYWMHANMLTLNGKKMSKSTGNN 295

Query: 286 ITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           I  +E+      F  +++ A V R  ML  HYR  +DFT            RL EA   L
Sbjct: 296 ILPSEIYSGGSPFLTKAFSASVARFFMLQAHYRSNLDFTNDAILAAEKGFYRLMEAIGSL 355

Query: 335 SKWPQTSTSKGI-ID-----PAVLSALYNDLNTVSAIQALHKLAR---------ESTKNH 379
               Q +TS    ID          A+ +D NT   I  L +  R         E+    
Sbjct: 356 KNTAQFTTSNTTSIDIKAWKQNCYDAMNDDFNTPILIAHLFEGVRFVNVLKENKETITTE 415

Query: 380 DLLPIF---NASA-HILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           DLL      NA    +LG+E  K   N N  +   +E L+Q R      K F+ +D IR 
Sbjct: 416 DLLDFLTTMNAFVFDVLGLEDEKLATNNNDKLDGVVEMLIQMRKQARDNKDFAMSDQIRD 475

Query: 434 QLESKGFILEDYK 446
           QL + G  L+D K
Sbjct: 476 QLLALGIQLKDSK 488


>gi|109894892|sp|Q3KKR0|SYC_CHLTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 477

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 171/486 (35%), Positives = 243/486 (50%), Gaps = 65/486 (13%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 5   LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 60

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 61  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 114

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 115 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 175 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGGVDN 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 235 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 292

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 293 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 347

Query: 354 A-----------LYNDLNTVSAIQALHKLARESTKNHD---------------------L 381
           A           L NDLN  S++ AL    R+   + D                     +
Sbjct: 348 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQHI 407

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+GF 
Sbjct: 408 LALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRGFA 464

Query: 442 LEDYKN 447
           +ED K 
Sbjct: 465 IEDGKT 470


>gi|78189774|ref|YP_380112.1| cysteinyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|109894890|sp|Q3APK6|SYC_CHLCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78171973|gb|ABB29069.1| cysteinyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 480

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 170/488 (34%), Positives = 247/488 (50%), Gaps = 65/488 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R    F+ +    + +YVCGPTVY  AH+G+A+  I FDV+ R  R   G K
Sbjct: 3   LAIYNSLSRTKEIFEPLHSGVVSIYVCGPTVYGHAHLGHAKSYISFDVVVRWFRQS-GYK 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y++NITD+          +DKI+++AR E    P+      I    T+ F +D  RL
Sbjct: 62  -VKYIQNITDVGHLTDDADEGEDKIMKQARLEKTD-PME-----IAQFYTRSFYEDMDRL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ- 173
               P   P AT HIP+ I L++ ++  G+AYE N  + F  +S   YG  S R   E  
Sbjct: 115 GVERPNIAPTATAHIPEQIALVETLLRKGYAYEVNGNVYFSVNSFAGYGKLSGRTDQEAL 174

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGK 229
           + G+RV  +  K++ +DF LWK++   E G    W+SPW  G PGWH+ECSAM+  YLG+
Sbjct: 175 QSGSRVGIRSEKRDASDFALWKKA---EEGHIMKWQSPWSVGYPGWHLECSAMAMKYLGE 231

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIHGGG++  FPHHE EIAQS  A   +     W+HN  + + G KM KS  NF+ + 
Sbjct: 232 TIDIHGGGMENKFPHHECEIAQSEAATG-KPYVRYWMHNNMVTVNGTKMGKSLKNFVNLK 290

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------ST 342
           ELL+T+           +R  +L +HYR P+D++   L  A   L K  +T       + 
Sbjct: 291 ELLQTRN-------PLALRFFILQSHYRSPLDYSEAALDAAAQGLEKLHETLRRFRHQAA 343

Query: 343 SKGIIDPAVLS-----ALYNDLNTVSAIQALHKLARESTKNHDLLPIFN----------- 386
             G +D    +     A+ +D NT  AI  L  L++      D   I             
Sbjct: 344 GSGSLDVTPYAERFSEAMNDDFNTPIAIAVLFDLSKAINSALDSKGIVEADRAAIEAFLT 403

Query: 387 -ASAHILGI---EVCKEHLNKNISIAIEKLVQERLIL----LKMKKFSSADYIRKQLESK 438
            A+ + LGI    +  E  N N    ++K++Q  L L     K K F+++D IR  L + 
Sbjct: 404 IAATNTLGIASNNLADEQSNGNSMQRLDKVMQIMLELRHNARKQKDFATSDKIRDMLLAA 463

Query: 439 GFILEDYK 446
           G  ++D K
Sbjct: 464 GIEIKDTK 471


>gi|332521572|ref|ZP_08398025.1| cysteinyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332042661|gb|EGI78861.1| cysteinyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 493

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 174/490 (35%), Positives = 250/490 (51%), Gaps = 57/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++IKIYN+L  K   F++I+   + MYVCGPTVY   H+GN R  + FD+++R L++  G
Sbjct: 7   QQIKIYNSLTGKKEPFKSINEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMVFRYLKHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +DKI ++AR E    P+      I  + T  F     
Sbjct: 66  YK-VRYVRNITDAGHLENDADVGEDKITKKARLEEIE-PME-----IVQRYTVDFHNVIN 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
               L P+ +P AT HI + I LI  II +G  Y  N  + FD    +   +YG  S+RK
Sbjct: 119 TFNLLPPSIEPTATGHIIEQIELINAIIENGFGYVVNGSVYFDVHKYNETNDYGILSKRK 178

Query: 170 IDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR  + +  KKNP DF LWK++ P     W SPW  G PGWH+EC+AMS+ YL
Sbjct: 179 LEDLIHNTRALDGQSDKKNPQDFALWKKAEPTHIMRWPSPWSDGFPGWHLECTAMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DL FPHHE EIAQ+  A   +   N W+H   L L G +MSKS GN I 
Sbjct: 239 GNQFDIHGGGMDLKFPHHECEIAQNQAA-LGQSPVNYWMHANMLELNGARMSKSTGNIIN 297

Query: 288 INELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE--------------- 331
             ELL  K     +++   V+R  M+ + YR  +D T   L  +E               
Sbjct: 298 PAELLSGKNNIMSKAYNPSVVRFFMMQSAYRSVLDLTDNGLLASEKGFNRLMNAVADIEK 357

Query: 332 --------ILLSKWPQT---STSKGIIDPAVLSALYNDLNTVSAIQALHK-LARESTKN- 378
                     +  W Q+   + +     P +++ L+  +N V+AI+   K +  E  K  
Sbjct: 358 LKTANQTNFDIQAWKQSCYDAMNDDFNTPILIANLFEGVNQVNAIKEGSKTITTEDLKTL 417

Query: 379 HDLLPIFNASAHILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
            D+  IF     ILG++  +E     + +S A+E L++ R      K F+ +D IR +L 
Sbjct: 418 KDVFNIF--VFDILGLKNNQESGAGTEKLSGAVELLIKLRQEARANKDFALSDKIRDELA 475

Query: 437 SKGFILEDYK 446
           + G  L D +
Sbjct: 476 AVGITLNDSR 485


>gi|282853446|ref|ZP_06262783.1| cysteine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582899|gb|EFB88279.1| cysteine--tRNA ligase [Propionibacterium acnes J139]
 gi|314922189|gb|EFS86020.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314928560|gb|EFS92391.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970346|gb|EFT14444.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|314982476|gb|EFT26569.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092230|gb|EFT64206.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094030|gb|EFT66006.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|328908175|gb|EGG27934.1| cysteine--tRNA ligase [Propionibacterium sp. P08]
          Length = 476

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 165/486 (33%), Positives = 237/486 (48%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 3   LKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 56

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 57  CSGYQVTVVANVTDIDDKILAK------SAATGTPWWAHAYHYENELHAAYKALGCRPPT 110

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE     
Sbjct: 111 YEPRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAE 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 171 DSDPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIH 229

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A  W+HN ++ + G KMSKS GN   + E+  T
Sbjct: 230 GGGIDLRFPHHENELAQSAAAGR--PFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV--T 285

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 286 KAYSPRA-----VRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLV 340

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-----------LARESTKNH-----DL 381
            +  T+   +  A ++A+ +DL T  A+ AL                E+T++H      +
Sbjct: 341 GEQVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAM 400

Query: 382 LPIFN---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           L +F     +     +    + L   +   +  ++++R      K +++AD IR  L + 
Sbjct: 401 LAVFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNL 460

Query: 439 GFILED 444
           G  +ED
Sbjct: 461 GLTIED 466


>gi|314965270|gb|EFT09369.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 476

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 163/486 (33%), Positives = 233/486 (47%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 3   LKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 56

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 57  CSGYQVTVVANVTDIDDKILAK------SAATGTPWWAHAYHYENELHAAYKALGCRPPT 110

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE     
Sbjct: 111 YEPRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAE 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 171 DSDPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIH 229

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A  W+HN ++ + G KMSKS GN   + E+  T
Sbjct: 230 GGGIDLRFPHHENELAQSAAAGR--PFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV--T 285

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 286 KAYSPRA-----VRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLV 340

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV- 396
            +  T+   +  A ++A+ +DL T  A+ AL     E  K+     +     H+  ++  
Sbjct: 341 GEQVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAM 400

Query: 397 ------------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                               + L   +   +  ++++R      K +++AD IR  L + 
Sbjct: 401 LAVFGLDPQAPEWADVTGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNL 460

Query: 439 GFILED 444
           G  +ED
Sbjct: 461 GLTIED 466


>gi|116515227|ref|YP_802856.1| hypothetical protein BCc_306 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285377|sp|Q057D6|SYC_BUCCC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116257081|gb|ABJ90763.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 476

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 168/488 (34%), Positives = 252/488 (51%), Gaps = 71/488 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL +K   F  +    I +YVCG T YDF HIG+AR  I+FD++ R L+ Y G  
Sbjct: 2   LRIFNTLTKKKEIFDFLLNKKINIYVCGVTTYDFCHIGHARTFIIFDIIIRYLQ-YLGYN 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              Y+RNITDIDDKII +A+        N++I I+ ++  +   KD   L  + P  +PR
Sbjct: 61  TF-YIRNITDIDDKIINKAKIN------NESIHILVNRMIKLMHKDFLSLNLIKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKID--EQKMGTRVPE 181
            T HI  +I  I+ ++ + +AY ++N +I+F  ++   YG  S R  +  E+   T   E
Sbjct: 114 VTQHISNIISSIKLLLKNNYAYVSDNKDILFKLNNFKEYGFLSNRMFNCSEKNFTTISKE 173

Query: 182 KYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGG 236
           K +  N  DF+LWK S  +       W SPWG GRPGWHIECS++ +++    V DIHGG
Sbjct: 174 KNYINNINDFVLWKHSNQLSIDTCTNWSSPWGAGRPGWHIECSSIINNFFKDGVVDIHGG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL+FPHHENEIAQ    +    + N WIH+G +  +  KMSKS  N ++I  LL    
Sbjct: 234 GIDLLFPHHENEIAQLKSMNN-SFSVNFWIHSGMVINKNHKMSKSFSNSVSIQYLL---- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV----- 351
              + + + +IR   L THYR P+ +     +E  +L+ K       + ++D  V     
Sbjct: 289 ---KKYDSEIIRWYFLATHYRHPLYY-----SEKNLLMMKNIFIKIYRSLLDCVVTINTK 340

Query: 352 ---------------LSALYNDLNT---VSAIQALHKLARESTKNHDLLPIFNAS----- 388
                           SA+ +D NT    S +Q + KL  ++ KN+  L    AS     
Sbjct: 341 IDYEYHLRNKIKRKFFSAMNDDFNTPKACSILQKISKLIYKNKKNNTYLANILASDLVYL 400

Query: 389 AHILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
             ILG+              C +  + ++ I +EKL   R      K+++ +D IRK+L 
Sbjct: 401 GKILGLFQNDPKNFFLKDNFCNK--STDLLIIVEKLFHMRNFYRSKKQWNLSDIIRKKLF 458

Query: 437 SKGFILED 444
             G I+ED
Sbjct: 459 CLGVIVED 466


>gi|228989298|ref|ZP_04149289.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228995481|ref|ZP_04155149.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764210|gb|EEM13089.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228770376|gb|EEM18949.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 420

 Score =  254 bits (648), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 228/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  I+ ++  G+AYE+  ++ + T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYESEGDVYYKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQNTNNGLERIKTAYGNLKHR 284

Query: 338 PQTSTS-----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST                  A  +A+ +D NT +A+  L+ LA  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLAEMKKFQVAFEAAMDDDFNTANAVTELYNLANHANQYLLEEHTSK 344

Query: 383 PIFNASAH-------ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 AVLEAYVKQFETLFGILGLELTKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILED------TAQGTRWKR 419


>gi|291529941|emb|CBK95526.1| cysteinyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 472

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 173/478 (36%), Positives = 248/478 (51%), Gaps = 54/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  K  EF       + MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F +D T+L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKYYTDAFFEDCTKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT+ I   I +I ++I  G+AYEA   I FDTS +  Y  F+  K ++  
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIEKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S  +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDDQELKWDSPWGVGYPGWHIECSCISMKHLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS  A    K  N W H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQS-EAYLGHKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQ-TSTS 343
            LLE+K +       PVI R   L++HYR+ + FT + L  A    E L++K  Q     
Sbjct: 292 -LLESKGYD------PVIYRFFCLLSHYRKSLVFTYENLDNAKGAYEKLVAKIAQLLKAE 344

Query: 344 KGIIDPAVL--------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           +G +D A          +A+ ND+NT  AI AL+ + +  T     L +      +L + 
Sbjct: 345 QGEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADTTPATKLALIADFDKVLSLS 404

Query: 396 VCKE---------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + ++           N  +   I +L ++R    K K F+ AD +R ++ + G+ +E+
Sbjct: 405 LIEKAKAVNEKPADTNDELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEE 462


>gi|15827087|ref|NP_301350.1| cysteinyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229565|ref|YP_002502981.1| cysteinyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13431898|sp|P57990|SYC_MYCLE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781687|sp|B8ZUA9|SYC_MYCLB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13092635|emb|CAC29831.1| putative cysteinyl-tRNA synthase [Mycobacterium leprae]
 gi|219932672|emb|CAR70416.1| putative cysteinyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 473

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 160/472 (33%), Positives = 241/472 (51%), Gaps = 50/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYG 62
           +++++T+   + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L  R Y  
Sbjct: 7   LRLHDTVAGAVRDFVPLRAGHVSIYLCGATVQGQPHIGHVRSGVAFDILRRWLMARGY-- 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V ++RN+TDIDDKI+ +A       P  +      + + + F      L  L P+ +
Sbjct: 65  --DVAFIRNVTDIDDKILNKAAA--AGRPWWE----WAATHERAFTAAYDALDVLPPSAE 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QMI LI+ +I  GHAY   +++ FD  S P+YG  S  K+D    G  V   
Sbjct: 117 PRATGHITQMIELIELLIETGHAYTGGSDVYFDVLSYPDYGQLSGHKMDYIHQGEGVTTG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+F
Sbjct: 177 --KRDQRDFTLWKGAKSGEPSWPTPWGRGRPGWHLECSAMARAYLGSEFDIHCGGMDLVF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++ + G KMSKS GN ++I  +L+      R  
Sbjct: 235 PHHENEIAQSRAVG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSIPAVLQ------RVR 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQ--TSTSKGIIDPAVLS 353
           PA  +R  +   HYR  ++F+   L +A       E  L++      +   G + P   +
Sbjct: 287 PAE-LRYYLGSAHYRSMLEFSEAALQDAVKAYVGVENFLTRVRTRVGAVGTGELTPRFAA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASA-----HILGIEVCKEHLNKN 404
           AL +DL    A+  +H    E  +  D+      + NA A      ILG +   E     
Sbjct: 346 ALDDDLAVPIALAEVHHARVEGNRALDIGDHEGALTNAGAIRAMMGILGCDPLDERWESR 405

Query: 405 ---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                    + + +   ++ R +  + + +  AD IR +L+  G  + D  N
Sbjct: 406 DETSAALAAVDVLVAAELESRQMAREQRNWVLADQIRDRLKDAGIEVTDTVN 457


>gi|288923576|ref|ZP_06417688.1| cysteinyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288345075|gb|EFC79492.1| cysteinyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 493

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/507 (31%), Positives = 242/507 (47%), Gaps = 78/507 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R++  F  + P ++ +YVCGPTV    H+G+ R  + FD+L R L       
Sbjct: 3   LRLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTGLAFDLLRRWLTQS--GL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TDIDDKII  A Q          +  + ++ T+ F +    +  L PT  P 
Sbjct: 61  SVTFVQNVTDIDDKIIINADQA------GTTVWELATRQTRAFDEAYRAVGVLPPTISPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+M+ +I  ++  G AY     + F   +  +YG+ S ++     M      +  
Sbjct: 115 ATGHIPEMLEMISVLVERGFAYPGAGSVWFRVGAFADYGALSHQR--PASMHPSPEAEPG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK   P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+FPH
Sbjct: 173 KADPRDFALWKAVKPGEPSWSSPWGPGRPGWHLECSAMAGKYLGGVFDIHGGGLDLVFPH 232

Query: 245 HENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HENE AQ+ CA       + AN W+H G L   G KMSKS GN   + + L   +     
Sbjct: 233 HENERAQTVCAAGGPAGGEMANYWMHIGLLTTGGTKMSKSLGNSFFVTDALAAVR----- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRL--------------------------------TE 329
               V+R  +L  HYR  ++++ Q L                                TE
Sbjct: 288 --PQVLRYHLLSAHYRSSLEYSPQTLDESGAAHDRVETFVRNALDILGGPAEAAALAGTE 345

Query: 330 AEILLSKWPQT---STSKGIIDPAVL-----SALYNDLNTVSAIQALHKLARES----TK 377
           A +  S  P T   + ++G + P ++     +A+ +DL    A+ AL           +K
Sbjct: 346 AGLAGSVGPGTVAGAAAEGDLTPELVWSEFAAAMDDDLAIGRALAALFGAVSRGNQVLSK 405

Query: 378 NHD-----LLPIFNASAHILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKKFS 426
            H       + +      +LG++  ++       L   +   +  L+  R      + ++
Sbjct: 406 AHSRELAGWVEVTRRMLTVLGLDPVEQWPTAGAELRPALDSVMGILLDLRSSARARRDYT 465

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQR 453
            AD IR +L + G ++ED      GQR
Sbjct: 466 EADSIRSRLAASGVVIEDTP---EGQR 489


>gi|153803824|ref|ZP_01958410.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124120641|gb|EAY39384.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 248

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 125/252 (49%), Positives = 165/252 (65%), Gaps = 9/252 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------AETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCA 255
           HHENEIAQSCCA
Sbjct: 234 HHENEIAQSCCA 245


>gi|126661994|ref|ZP_01732993.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625373|gb|EAZ96062.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 494

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 173/491 (35%), Positives = 243/491 (49%), Gaps = 55/491 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL  +   F  I   NI MYVCGPTVY   H+GN R  + FDV++R L++   
Sbjct: 7   QTLHIYNTLSGEKETFTPIHEGNIGMYVCGPTVYSNVHLGNVRTFMSFDVIFRYLQHL-- 64

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD           +D+ ++++R E    P+      I  K T  F K   
Sbjct: 65  DYKVRYVRNITDAGHLTDDGDVDNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKVLD 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRR 168
               L PT +P AT HI + I L Q +I  G AYE+N  + FD  +      NYG  S R
Sbjct: 119 TFNFLPPTIEPTATGHILEQIELTQKLIDTGFAYESNGSVYFDVFAYNQKGMNYGELSNR 178

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            I+E    TR +  +  KKNP DF LWK ++P     W SPWG G PGWH+EC+AMS+ Y
Sbjct: 179 NIEELFANTRDLDGQSEKKNPQDFALWKNASPAHIMRWNSPWGEGFPGWHLECTAMSTKY 238

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DL FPHHE E+AQ    +      N W+H   L + G +MSKS GN+I
Sbjct: 239 LGETFDIHGGGMDLKFPHHECEVAQGKACNG-HSPVNFWMHTNMLTMNGLRMSKSTGNYI 297

Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLS 335
              EL+  +  F  + +   ++R   L  HYR  +D +            RL E+  L+ 
Sbjct: 298 LPMELVTGENTFFEKPFQPNIVRFCFLQAHYRSVLDISNDAMLASEKGYSRLMESYKLIP 357

Query: 336 KWPQTSTSKGIIDP---AVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLP 383
               ++TS   I     +   A+ +D NT   I  L + AR         ES     +  
Sbjct: 358 MLKASATSTLDIASWKQSCYDAMNDDFNTPILIAQLFEGARYINLVNDGKESLTTEHIQL 417

Query: 384 IFNASAH----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
           + N  +     +LG+        +  + +S  +E L+  R      K F+ +D IR QL 
Sbjct: 418 LQNTISSFLFDVLGLSNEASGNSNTTEKLSGVVEMLIGMRNEARANKNFALSDQIRDQLL 477

Query: 437 SKGFILEDYKN 447
           + G  L+D K+
Sbjct: 478 ALGIQLKDGKD 488


>gi|183221111|ref|YP_001839107.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911202|ref|YP_001962757.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775878|gb|ABZ94179.1| Cysteine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779533|gb|ABZ97831.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 485

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 170/493 (34%), Positives = 238/493 (48%), Gaps = 61/493 (12%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           NT   K   FQ  DP+++ +Y CGPTVY+FAHIGN R  +  DVL R L    G   +  
Sbjct: 10  NTKSGKKEPFQPKDPNSVTIYSCGPTVYNFAHIGNIRSFLFVDVLRRAL--LLGGYKLNQ 67

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
             NITDIDDKII+       SI  N ++   T   T  F KD   L      H P+AT  
Sbjct: 68  SMNITDIDDKIIKE------SIKQNVSVEEFTKPWTDAFFKDLETLQVQKLEHYPKATES 121

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKYHKKN 187
           I  M+ L++ +  +G AYE +  + F       YG  S+  +   K G R   ++Y K +
Sbjct: 122 IDDMVTLVETLQSNGLAYERDGNVYFSIQKFNQYGELSKIDVSGMKSGVRYDADEYEKDD 181

Query: 188 PADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
             DF+LWK + T  E  W +  G GRPGWH+ECSAM     G   DIH GG+DL+FPHHE
Sbjct: 182 VRDFVLWKNQKTKEEKCWHTRIGMGRPGWHLECSAMIRKIYGTGIDIHTGGIDLLFPHHE 241

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NE AQS  A   E     W+H   L ++G KMSKS GNF T+ ++L  K F  R+     
Sbjct: 242 NEFAQSVGAYPEETFVGTWLHCEHLLVDGEKMSKSKGNFYTLRDIL-NKGFEPRA----- 295

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------------WPQ---TST 342
           IR  ++  HYR  ++F++ +L E+++ L +                     W Q   T  
Sbjct: 296 IRFHLISAHYRSKLNFSLGKLEESKVALDRIQNTIFRLLELNPSVDLNTNDWNQIHFTDP 355

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLAR------ESTKNHDLLPIF----------N 386
               +D   L+A+ +DLN   A+  L++  R      + TK  +    F          N
Sbjct: 356 EIQTLDSDFLNAIADDLNVPKALATLYEFVRLVNQSLDQTKEKNADEFFKQCLGFFYKIN 415

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +   +   E  KE L+      I   +  R +  + K F++AD IRK+LE  G +L D K
Sbjct: 416 SLFAVFSFEKQKETLDGISEDWILDQIANRKLAKQNKDFATADNIRKELEKIGILLTDTK 475

Query: 447 NPDNGQRMTRWKQ 459
             +     T WK+
Sbjct: 476 EGN-----TTWKK 483


>gi|217968073|ref|YP_002353579.1| cysteinyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|226735054|sp|B8E391|SYC_DICTD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217337172|gb|ACK42965.1| cysteinyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 465

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/469 (36%), Positives = 249/469 (53%), Gaps = 48/469 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YNTL R+  +F+ ++P  + MY CGPTVY++AHIGN R  I  D+L R+L   Y  
Sbjct: 2   ELYLYNTLTRRKEKFEPLNPPYVGMYTCGPTVYNYAHIGNLRTYIFEDILKRVL--LYNG 59

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V +V NITD+          +DKI   A++E  +         I    T+ F +D  +
Sbjct: 60  YIVKHVMNITDVGHLTSDADEGEDKIEREAKKERRTA------WEIAEFYTEAFKRDIKK 113

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L  L P    +AT+HI   I LI  +   G+ Y+ ++ I FDTS +P+YG  + + ++  
Sbjct: 114 LNILEPDIWCKATDHIKDFIDLILILEKKGYTYKTSDGIYFDTSKVPDYGKLAGQDLENL 173

Query: 174 KMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
             G RV     KKNP DF LWK   +    +  W+SPWG G PGWHIECSAMS+ YLG+ 
Sbjct: 174 LPGARVEYNPEKKNPTDFALWKFSPKDVKRQMEWDSPWGIGFPGWHIECSAMSTKYLGQP 233

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIH GG+D I  HH NEIAQS  A   +  A  W+H  FL +  ++M KS GNFIT+++
Sbjct: 234 FDIHCGGIDHIPIHHTNEIAQSEAA-YDKPMAKYWLHGEFLVMGEKRMGKSEGNFITLSD 292

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTS 343
            LE K +   S+     R   L  HYR P+ FT   L  A+  L        ++PQ + S
Sbjct: 293 -LEEKGYHPLSY-----RYFCLTAHYRSPLRFTWTALESAQRALFRLYENMKRYPQENAS 346

Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-VCKEHL 401
                +     A+ +DL+   A+    +L ++     D +P     A +L  + V    L
Sbjct: 347 YDKKYEEEFHKAINDDLDMPKALAITWELVKD-----DQVPPEVKRATLLQFDKVLGLSL 401

Query: 402 NKNISIAIE------KLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N    I IE      KLV+ER +  K K +  AD IR+++ +KG+I+ED
Sbjct: 402 NNPPEIKIEIPEEIWKLVEERELARKNKDWEKADKIREEIRNKGYIIED 450


>gi|163846330|ref|YP_001634374.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524094|ref|YP_002568565.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163667619|gb|ABY33985.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222447973|gb|ACM52239.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 398

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 145/382 (37%), Positives = 203/382 (53%), Gaps = 30/382 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL R    F       + +YVCG T YD  H+G+AR  IVFDVL R L++     
Sbjct: 1   MQLFSTLSRTRETFTVPTDRPVTLYVCGVTPYDTTHMGHARTFIVFDVLVRYLQWQ--GA 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N+TD+DD + ERAR++   +  ++    +  +  +Q   D   L  L PT  PR
Sbjct: 59  TVRYCQNVTDVDDPLFERARRD--GVQWDE----LAERQIRQLRADCADLNILPPTFFPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-----QKMGTRV 179
            +  +  MI +I+ +I  GHAY  +  + F   + P++G  +R    E      + G   
Sbjct: 113 VSEEVGTMIPIIERLIELGHAYVVDGNVYFSIQTDPDFGRMARMGYSELLAIANQRGNN- 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P   +K++P DF+LW+R  P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG D
Sbjct: 172 PHDPNKRDPLDFVLWQRGNPDEPKWESPWGLGRPGWHIECSAMSQRYLGEQIDIHGGGAD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH  EIAQS  A      A  W+H G + L+G KMSKS GN +   + L       
Sbjct: 232 LIFPHHSCEIAQSESATGKRPFARFWMHVGLVWLDGEKMSKSLGNLVFARDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPA-------- 350
           R      IR  +L  HYRE  D+    L   E   +   Q  S + G   P         
Sbjct: 285 REHHPDAIRWYLLSEHYREDFDYRRDALVRFEQYAADLRQALSVTGGSHSPLDVSRGRED 344

Query: 351 VLSALYNDLNTVSAIQALHKLA 372
           V++A+ +DL+T + +  LH +A
Sbjct: 345 VIAAMNDDLDTPTVLAVLHTMA 366


>gi|269302721|gb|ACZ32821.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 474

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 167/482 (34%), Positives = 243/482 (50%), Gaps = 62/482 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  YNT  +K  E    + + +R+Y CGPTVYD+AHIGN R  +  D+L R L ++    
Sbjct: 9   LYFYNTASQK-KELFFPNHTPVRLYTCGPTVYDYAHIGNFRTYVFEDILKRTLVFF--GY 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITD++DK I  A ++  +IP+ +     T   T+ F +D   L        P 
Sbjct: 66  SVTHVMNITDVEDKTIAGASKK--NIPLQE----YTQPYTEAFFEDLDTLNIAKADFYPH 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEK 182
           AT++IPQMI  I  ++  G AY   +  + F  +  PNYG  S   +   +  +R+  ++
Sbjct: 120 ATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISADE 179

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           Y K+NP+DF+LWK   P   G   WESP+G+GRPGWH+ECS M+   LG   DIH GG+D
Sbjct: 180 YDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGGVD 239

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            IFPHHENEIAQS      +     W+H+  L ++G+KMSKS GNF+T+ +LL  + F G
Sbjct: 240 NIFPHHENEIAQSEALSG-KPFVRYWLHSEHLLIDGKKMSKSLGNFLTLRDLLH-QGFTG 297

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------SKWPQTS 341
           +      +R  +L +HYR  ++FT + L      L                  S  P+T 
Sbjct: 298 QE-----VRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPRTL 352

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
            S      A   AL NDLN  +   +L     E     D           +L        
Sbjct: 353 DSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKVDT 412

Query: 391 ILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +LG+      VC       I   + +LV ER    K K ++ AD +R ++ + GF++ED 
Sbjct: 413 VLGVLPLTTSVC-------IPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDS 465

Query: 446 KN 447
           K+
Sbjct: 466 KS 467


>gi|325681471|ref|ZP_08160997.1| cysteine--tRNA ligase [Ruminococcus albus 8]
 gi|324106961|gb|EGC01251.1| cysteine--tRNA ligase [Ruminococcus albus 8]
          Length = 470

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 173/487 (35%), Positives = 242/487 (49%), Gaps = 53/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  K+ EF       + MY CGPTVY FAHIGN R  I+ DVL + +R+   + 
Sbjct: 1   MRIYNTLSHKVEEFVPNTAGKVAMYTCGPTVYHFAHIGNLRSYIMEDVLEKYMRWQGLD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F  D  +L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKFYTDAFFTDCAKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT +I + I +I ++I  G+AYEA   I FDTS +  Y  F     ++ +
Sbjct: 113 NIKTPDVVAPATTYIDEFIKVISSLIEKGYAYEAGGNIYFDTSKLDEYYVFHNFSAEDLE 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  WESPWG G PGWHIECS +S   LG+
Sbjct: 173 VGVREGVEEDTNKRNKADFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSCISMKNLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D IFPHH NEIAQS  A    K  N W H   LN +  KMSKS G F+T++
Sbjct: 233 YLDIHCGGVDNIFPHHTNEIAQS-EAYIGHKWCNYWFHVHHLNTDTGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSK 344
            LLE K      +   V R   L +HYR+ + F+ + L  A+    K         S  K
Sbjct: 292 -LLEEK-----GYDPLVYRFFCLQSHYRKSLVFSWENLDNAKTAYEKLTARIASLMSGDK 345

Query: 345 GIIDPAVLSALY--------NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           G +  A   AL         +D+NT + I AL+ + +  T     L +      +L + +
Sbjct: 346 GEVISADFDALKAKFTAAMDDDINTSNGITALYDVLKADTTPATKLALIEDFDKVLSVGL 405

Query: 397 CK-------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            K       E    +I   +  LV+ER    K K F+ AD IR ++ + G+ +   K   
Sbjct: 406 IKAAEKQNEEKSGGDIPAEVMALVEERQAARKAKDFAKADEIRDKIAALGYAV---KETR 462

Query: 450 NGQRMTR 456
            G  +T+
Sbjct: 463 QGTEITK 469


>gi|313765525|gb|EFS36889.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772927|gb|EFS38893.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313793050|gb|EFS41117.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802500|gb|EFS43722.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313806517|gb|EFS45024.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811065|gb|EFS48779.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313814433|gb|EFS52147.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313815074|gb|EFS52788.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313817384|gb|EFS55098.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313821872|gb|EFS59586.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313824232|gb|EFS61946.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826599|gb|EFS64313.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313828596|gb|EFS66310.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313831829|gb|EFS69543.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834628|gb|EFS72342.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313840141|gb|EFS77855.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314915835|gb|EFS79666.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314917110|gb|EFS80941.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314921385|gb|EFS85216.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314926686|gb|EFS90517.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314931295|gb|EFS95126.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954883|gb|EFS99289.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958817|gb|EFT02919.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314961109|gb|EFT05210.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314964465|gb|EFT08565.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314969564|gb|EFT13662.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974629|gb|EFT18724.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314977177|gb|EFT21272.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314980410|gb|EFT24504.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314985726|gb|EFT29818.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314987251|gb|EFT31342.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314988860|gb|EFT32951.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315078520|gb|EFT50551.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315082016|gb|EFT53992.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315082488|gb|EFT54464.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315086199|gb|EFT58175.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315087784|gb|EFT59760.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315097463|gb|EFT69439.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315099913|gb|EFT71889.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101774|gb|EFT73750.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315110268|gb|EFT82244.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327331451|gb|EGE73190.1| cysteine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333438|gb|EGE75158.1| cysteine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327445542|gb|EGE92196.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327447161|gb|EGE93815.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327449804|gb|EGE96458.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327454653|gb|EGF01308.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327456727|gb|EGF03382.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|327457001|gb|EGF03656.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|328755708|gb|EGF69324.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328756487|gb|EGF70103.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328758784|gb|EGF72400.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328761794|gb|EGF75307.1| cysteine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 490

 Score =  253 bits (647), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 166/486 (34%), Positives = 235/486 (48%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 17  FKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 70

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 71  CSGYRVTVVANVTDIDDKILAK------SAAAGTPWWAHAYHYENELHAAYKALGCRPPT 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE     
Sbjct: 125 YEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAE 184

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 185 DSDPR-GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIH 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A+ W+HN ++ + G KMSKS GN   ++E+  T
Sbjct: 244 GGGIDLRFPHHENELAQSAAAGR--PFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEV--T 299

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 300 KTYSPRA-----VRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLV 354

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNAS 388
            +  T+   +  A + A+ +DL T  A+ AL     E  K+  +         L    A 
Sbjct: 355 GEQVTASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAM 414

Query: 389 AHILGIE----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             + G++               L   +   ++ ++ +R      K +++AD IR  L + 
Sbjct: 415 LAVFGLDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNL 474

Query: 439 GFILED 444
           G  +ED
Sbjct: 475 GLTIED 480


>gi|229027937|ref|ZP_04184090.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228733325|gb|EEL84154.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 420

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 156/444 (35%), Positives = 229/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGNGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 338 PQTST------SKGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST       K + +      A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTELTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILED------TAQGTRWKR 419


>gi|282878389|ref|ZP_06287179.1| cysteine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299491|gb|EFA91870.1| cysteine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 496

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 174/499 (34%), Positives = 256/499 (51%), Gaps = 63/499 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFVYNTLTRKKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQLYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  + FD        +YG  S 
Sbjct: 113 MDALNVLRPSIEPHATGHIIEQEELVKQILANGYAYESNGSVYFDIEKYNKDHHYGILSG 172

Query: 168 RKIDEQKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  +    K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINNSRELDGVDEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVRYWMHNNMITINGKKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+ +    T     +++    IR  +L  HYR  +DF+          ++RL      L
Sbjct: 292 ITLEQFFHGTHDRLTQAYSPMTIRFFILSAHYRSTVDFSNKALQASEKGLERLMNGINDL 351

Query: 335 SKWPQTSTSKGIIDPAVLS-------ALYNDLNTVSAI----QALHKL-----------A 372
            +    STS       V++       A+ +DL T + I    +A H +           A
Sbjct: 352 ERIQAASTSDEATHQLVVTLRQKCHEAMNDDLQTPTVISNLFEACHAINSLLDHKGSINA 411

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSA 428
            + T+   ++ +F  +  +LG++  K   N     A  K+V   L L       K ++++
Sbjct: 412 EDLTELKAVMQLF--AFDLLGLKSEKGSNNDAREAAYGKVVDMVLSLRAKAKAEKDWATS 469

Query: 429 DYIRKQLESKGFILEDYKN 447
           D IR  L   GF ++D K+
Sbjct: 470 DQIRDALAENGFEVKDTKD 488


>gi|262384651|ref|ZP_06077784.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262293632|gb|EEY81567.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 491

 Score =  253 bits (646), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 175/493 (35%), Positives = 258/493 (52%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +          +++ A  IR  +L  HYR  +DF+ + L  AE  LS+  +     
Sbjct: 292 ITLEQFFTGDHASLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351

Query: 340 -------TST--SKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLL 382
                  TST  +KG+ +     A+ +DLN+   I  L  +AR        ++T + + L
Sbjct: 352 MKLKPSATSTVDTKGLREK-CFEAMNDDLNSPIVISHLFDVARTINSVKDGKATLSEEDL 410

Query: 383 PIFNASAH-----ILGI--EVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H     ILG+  E      N +  S A++ L+  R      K ++++D IR +
Sbjct: 411 KELQEVFHLFLFDILGMKDEASASGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTAMGFEIKDTKD 483


>gi|170783050|ref|YP_001711384.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189082062|sp|B0RAX1|SYC_CLAMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169157620|emb|CAQ02818.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 484

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 156/484 (32%), Positives = 243/484 (50%), Gaps = 58/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++++  + + +F  +    + +YVCGPTV    HIG+ R  + +D L R L Y   + 
Sbjct: 3   LRLHDSRTQSLRDFVPLVDGRVGIYVCGPTVQSAPHIGHLRSALAYDQLRRWLAYRGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT VRN+TDIDDK+I+ AR+   +    +  ++   +   +F +    L  L P+++PR
Sbjct: 62  -VTLVRNVTDIDDKVIDNARRGQEAGGTEEWWAL-AYRVELEFSRAYAALGILPPSYEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT  I +M  +I  ++  GHAY A++   ++ FDT+S P YG  +R++  + +       
Sbjct: 120 ATASIGEMQAIIGRLVERGHAYPADDGSGDVYFDTASWPEYGELTRQRAADMEAAADADP 179

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++  DF LWK + P EP    W SPWG GRPGWHIECSAMS+ YLG  FDIHGGGL
Sbjct: 180 RA-KRDVRDFALWKGAKPGEPASASWPSPWGAGRPGWHIECSAMSTRYLGAEFDIHGGGL 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A   +  A  W+HNG + + G+KMSKS GN +   +LL + +  
Sbjct: 239 DLRFPHHENELAQSRAAG--DPFARYWLHNGLVAVAGQKMSKSLGNSLFAADLLASAR-- 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF---------------------TVQRLTEAEILLSKW 337
               P  V+R  +   HYR  ++F                     + +RL       ++ 
Sbjct: 295 ----PV-VVRYFLGSAHYRSTLEFHDGALAEAEAALDRIETFLDRSARRLAGTR-FQAEP 348

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
             T  +   +      A+ +DL+   A+  LH   R      D         L    +A 
Sbjct: 349 AATDGAPAAVPDEFAEAMDDDLSVPQALAVLHDAVRAGNAALDAGDLQEAASLRADVSAM 408

Query: 389 AHILGIE--------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             +LGI+           +   + +   +E  + ER    + + F+ AD IR++L   G 
Sbjct: 409 VAVLGIDPLADEWRTASDQPARRALQALVEHRIAERQTAREARDFALADRIRQELAEAGI 468

Query: 441 ILED 444
            +ED
Sbjct: 469 TIED 472


>gi|300813895|ref|ZP_07094199.1| putative cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511958|gb|EFK39154.1| putative cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 276

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 132/284 (46%), Positives = 169/284 (59%), Gaps = 12/284 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L  K  EF  I+   + MY CGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLFNSLTGKKEEFYPINSGKVTMYNCGPTVYNYIHVGNARPIVVFDTLRRY--FLYKGL 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDKII RA +E      N     I  K  ++F KD + L      T  P
Sbjct: 59  DVKFVLNFTDIDDKIINRANEE------NKTTEQIAEKYIEEFKKDASALGLYDYQTINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+ + QMI  IQ +I  G AY ++ ++ FD +    YG  S +KI++ + G+RV    
Sbjct: 113 RATHVVDQMISFIQTLIDKGAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRVDVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK     EP W++PWG GRPGWHIECS M+   LG   DIH GG DL FP
Sbjct: 173 LKRNPYDFALWKNKKENEPYWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGEDLKFP 232

Query: 244 HHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           HHENEIAQS  C D     A  W+HNG + +   KMSKS GNF 
Sbjct: 233 HHENEIAQSETCND--APFARFWLHNGMITVNNEKMSKSKGNFF 274


>gi|289424245|ref|ZP_06426028.1| cysteine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154942|gb|EFD03624.1| cysteine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 486

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 166/486 (34%), Positives = 235/486 (48%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 13  FKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 66

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 67  CSGYRVTVVANVTDIDDKILAK------SAAAGTPWWAHAYHYENELHAAYKALGCRPPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE     
Sbjct: 121 YEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAE 180

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 181 DSDPR-GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIH 239

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A+ W+HN ++ + G KMSKS GN   ++E+  T
Sbjct: 240 GGGIDLRFPHHENELAQSAAAGR--PFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEV--T 295

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 296 KTYSPRA-----VRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLV 350

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNAS 388
            +  T+   +  A + A+ +DL T  A+ AL     E  K+  +         L    A 
Sbjct: 351 GEQVTASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAM 410

Query: 389 AHILGIE----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             + G++               L   +   ++ ++ +R      K +++AD IR  L + 
Sbjct: 411 LAVFGLDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNL 470

Query: 439 GFILED 444
           G  +ED
Sbjct: 471 GLTIED 476


>gi|327329368|gb|EGE71128.1| cysteine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 476

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 165/486 (33%), Positives = 236/486 (48%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 3   FKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 56

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 57  CSGYQVTVVANVTDIDDKILAK------SAATGTPWWAHAYHYENELHAAYKALGCRPPT 110

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE     
Sbjct: 111 YEPRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAE 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 171 DSDPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIH 229

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A  W+HN ++ + G KMSKS GN   + E+  T
Sbjct: 230 GGGIDLRFPHHENELAQSAAAGR--PFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV--T 285

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 286 KAYSPRA-----VRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLV 340

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-----------LARESTKNH-----DL 381
            +  T+   +  A ++A+ +DL T  A+ AL                E+T++H      +
Sbjct: 341 GEQVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAM 400

Query: 382 LPIFN---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           L +F     +     +    + L   +   +  ++++R      K +++AD IR  L + 
Sbjct: 401 LAVFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNL 460

Query: 439 GFILED 444
           G  +ED
Sbjct: 461 GLTIED 466


>gi|148273671|ref|YP_001223232.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166200144|sp|A5CTY3|SYC_CLAM3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|147831601|emb|CAN02569.1| cysS1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 484

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 155/484 (32%), Positives = 244/484 (50%), Gaps = 58/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++++  + + +F  +    + +YVCGPTV    HIG+ R  + +D L R L +   + 
Sbjct: 3   LRLHDSRTQSLRDFVPLVDGRVGIYVCGPTVQSAPHIGHLRSALAYDQLRRWLTHRGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT VRN+TDIDDK+I+ AR+   +    +  ++   +   +F +  + L  L P+++PR
Sbjct: 62  -VTLVRNVTDIDDKVIDNARRGQEAGGTEEWWAL-AYRVELEFSRAYSALGILPPSYEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT  I +M  +I+ ++  GHAY A++   ++ FDT+S P YG  +R++  + +       
Sbjct: 120 ATASIGEMQEIIRRLVERGHAYAADDRSGDVYFDTASWPEYGELTRQRAADMEAAADADP 179

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++  DF LWK + P EP    W SPWG GRPGWHIECSAMS+ YLG  FDIHGGGL
Sbjct: 180 RA-KRDVRDFALWKGAKPGEPASASWPSPWGSGRPGWHIECSAMSTRYLGAEFDIHGGGL 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A   +  A  W+HNG + + G+KMSKS GN +   +LL + +  
Sbjct: 239 DLRFPHHENELAQSRAAG--DPFARYWLHNGLVAVAGQKMSKSLGNSLFAADLLASAR-- 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF---------------------TVQRLTEAEILLSKW 337
               P  V+R  +   HYR  ++F                     + +RL       +  
Sbjct: 295 ----PV-VVRYFLGSAHYRSTLEFHDGALAEAEAALDRIETFLDRSARRLAGTRFQAAPA 349

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
               +   + D     A+ +DL+   A+  LH   R      D         L    +A 
Sbjct: 350 APDGSPAAVPDE-FAEAMDDDLSVPQALAVLHDAVRAGNAALDAGDLQEAASLRADVSAM 408

Query: 389 AHILGIE--------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             +LGI+           +   + +   +E  + ER    + + F+ AD IR++L   G 
Sbjct: 409 VAVLGIDPLADEWRTASDQPARRALQALVEHRIAERQTAREARDFALADRIRQELAEAGI 468

Query: 441 ILED 444
            +ED
Sbjct: 469 TIED 472


>gi|289426643|ref|ZP_06428372.1| cysteine--tRNA ligase [Propionibacterium acnes J165]
 gi|295129940|ref|YP_003580603.1| cysteine--tRNA ligase [Propionibacterium acnes SK137]
 gi|289160138|gb|EFD08313.1| cysteine--tRNA ligase [Propionibacterium acnes J165]
 gi|291375451|gb|ADD99305.1| cysteine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332674781|gb|AEE71597.1| cysteine--tRNA ligase [Propionibacterium acnes 266]
          Length = 499

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 166/486 (34%), Positives = 235/486 (48%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 26  FKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 79

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 80  CSGYRVTVVANVTDIDDKILAK------SAAAGTPWWAHAYHYENELHAAYKALGCRPPT 133

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE     
Sbjct: 134 YEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAE 193

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 194 DSDPR-GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIH 252

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A+ W+HN ++ + G KMSKS GN   ++E+  T
Sbjct: 253 GGGIDLRFPHHENELAQSAAAGR--PFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEV--T 308

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 309 KTYSPRA-----VRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLV 363

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNAS 388
            +  T+   +  A + A+ +DL T  A+ AL     E  K+  +         L    A 
Sbjct: 364 GEQVTASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAM 423

Query: 389 AHILGIE----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             + G++               L   +   ++ ++ +R      K +++AD IR  L + 
Sbjct: 424 LAVFGLDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNL 483

Query: 439 GFILED 444
           G  +ED
Sbjct: 484 GLTIED 489


>gi|328950671|ref|YP_004368006.1| cysteinyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450995|gb|AEB11896.1| cysteinyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 481

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 146/335 (43%), Positives = 191/335 (57%), Gaps = 28/335 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F+   P  + +YVCGPTVY   H+G+AR  I +DVL R L++  G K V
Sbjct: 5   IYNTLSRRKEAFEPATPGYVGIYVCGPTVYSDPHLGHARGPITYDVLRRWLQHL-GYK-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +V NITD+          +DKI +RA+ E    P+      +  K   ++  D   L  
Sbjct: 63  RFVSNITDVGHLTDDADEGEDKIQKRAKLERLE-PME-----VAEKYMWRYFDDMRDLNV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L P   PRAT HIP+ I L Q +I  G+AYE N  + F  +  P YG  S +++DE   G
Sbjct: 117 LRPDIAPRATGHIPEQIELTQRLIERGYAYERNGSVYFRAAKWPGYGRLSGKRLDELVAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
            RV  +  K++P D+ LWK + P     W+SPWG G PGWHIECSAMS  YLG+ FDIH 
Sbjct: 177 ARVAVREEKEDPRDWALWKAADPGHIMRWKSPWGEGYPGWHIECSAMSLKYLGENFDIHA 236

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHE EIAQ+  A    K A  W+H+  + L G KM+KS GN + + ELL   
Sbjct: 237 GGIDLQFPHHECEIAQAEAAGY--KFARYWMHHNHVLLNGEKMAKSTGNLVVLRELLS-- 292

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
               R  P  VIR  +L +HYR  +DFT + L  A
Sbjct: 293 ----RHEPM-VIRFYLLQSHYRSVLDFTEEGLEAA 322


>gi|41406576|ref|NP_959412.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|61216572|sp|Q743W3|SYC_MYCPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|41394925|gb|AAS02795.1| CysS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 468

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 154/474 (32%), Positives = 236/474 (49%), Gaps = 48/474 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYY 60
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L+   
Sbjct: 4   RPRLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIALG 63

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y    V ++RN+TDIDDKI+ +A                 +   + F      L  L P+
Sbjct: 64  YD---VAFIRNVTDIDDKILNKA------AAAGRPWWEWAATYERAFSAAYDALDVLPPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT HI QM+ LI+ +I  GHAY  + ++ FD  S P YG  S  +ID+   G  V 
Sbjct: 115 AEPRATGHITQMVELIERLIEKGHAYTGDGDVYFDVLSYPEYGQLSGHRIDDVHQGEGVA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH EC AM+  YLG  FDIH GG+DL
Sbjct: 175 SG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMAHEYLGPEFDIHCGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  +L+      R
Sbjct: 233 VFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQ------R 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQ------TSTSKGIIDPAV 351
             PA  +R  +   HYR  ++F+   +Q   +A + + ++         +   G  +P  
Sbjct: 285 VRPAE-LRYYLGSAHYRSMLEFSDTALQDAVKAYVGVEEFLHRVRVRVGAVEPGEPNPRF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN 402
             AL +DL   +A+  +H+   E  +  D               A   ILG +   E   
Sbjct: 344 ADALNDDLAVPAALAEVHQARAEGNRALDSGDHEGALRQARSIRAMMGILGCDPLHERWE 403

Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                      + + +   +Q R    + + ++ AD IR +L+  G  + D  +
Sbjct: 404 TRDETSAALAAVDVLVRAELQNREKAREQRNWALADEIRNRLKQAGIEVTDTAD 457


>gi|269103035|ref|ZP_06155732.1| cysteinyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162933|gb|EEZ41429.1| cysteinyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 410

 Score =  253 bits (646), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 163/435 (37%), Positives = 233/435 (53%), Gaps = 52/435 (11%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           + R LRY   +  +T+VRNITDIDDKII+RA +        +    +T +   +   D  
Sbjct: 1   MSRYLRYLGYD--LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFD 52

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKID 171
            L    P  +PRAT  I ++I L + +I  G AY A+N +++F+ S   +YG  S++ +D
Sbjct: 53  ALGMKRPDVEPRATAFISEIIALCERLIERGFAYVADNGDVMFEVSKFKDYGRLSKQDLD 112

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           + + G RV  +  K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  F
Sbjct: 113 QLQAGARVDIELAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHF 172

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG DL FPHHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++
Sbjct: 173 DIHGGGSDLQFPHHENEIAQSCCAHDTQYV-NTWMHSGMVMVDREKMSKSLGNFFTIRDV 231

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           L         +    +R  ++  HYR  ++++   L +A   L +     TS   +D +V
Sbjct: 232 L-------NHYDPETVRYFLMSGHYRSQLNYSEDNLKQARSALER---LYTSLRGLDTSV 281

Query: 352 LS------------ALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNAS----AHI 391
            +            A+ +D NT  A   L  +ARE     T +     +  A     A +
Sbjct: 282 EAAGGEEFVARFKEAMDDDFNTPEAYSVLFDMAREINRLKTDDMAAASVLGARMRELADV 341

Query: 392 LGI-----EV-CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           LG+     EV  +   N +    IE L+Q+RL     K +++AD  R +L   G ILED 
Sbjct: 342 LGLLGQEPEVFLQSGANDDDVAEIEALIQQRLDARAAKDWAAADQARDKLTEMGIILED- 400

Query: 446 KNPDNGQRMTRWKQK 460
                G + T W++K
Sbjct: 401 -----GPQGTTWRRK 410


>gi|219849725|ref|YP_002464158.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543984|gb|ACL25722.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 400

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 145/384 (37%), Positives = 204/384 (53%), Gaps = 34/384 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL R    F       + +YVCG T YD  H+G+AR  IVFDVL R LR      
Sbjct: 1   MQLFSTLSRIREPFSPPTDRPVTLYVCGVTPYDTTHMGHARTFIVFDVLVRYLRRQ--GA 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            VTY +NITD+DD + ERAR+        D ++   +  +   Q   D   L  L PT  
Sbjct: 59  TVTYCQNITDVDDPLFERARR--------DGVNWYELAERQIAQLRADCADLNILPPTFA 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-----QKMGT 177
           PR +  +  MI +I+ ++  GHAY  +  + F   + P++G  +R    E      + G 
Sbjct: 111 PRVSEEVAIMIPIIERLVELGHAYVVDGNVYFSIQTDPDFGRMARMGYAELLSIANQRGN 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P   +K++P DF+LW+R  P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG
Sbjct: 171 N-PHDPNKRDPLDFVLWQRGNPDEPKWESPWGLGRPGWHIECSAMSIRYLGEQIDIHGGG 229

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH  EIAQS  A      A IW+H G + L+G KMSKS GN +   + L+    
Sbjct: 230 ADLIFPHHSCEIAQSESATGKRPFARIWMHVGLVWLDGEKMSKSLGNLVFARDALQMHH- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPA------ 350
                    +R  +L  HYRE  D+  + +   E   +      S + G   P       
Sbjct: 289 ------PDALRWYLLSEHYREDFDYRREAVARYEQYAADLRHALSLTGGTHSPLDVSRGR 342

Query: 351 --VLSALYNDLNTVSAIQALHKLA 372
             V++++ +DL+T +A+ +LH +A
Sbjct: 343 SDVITSMNDDLDTPAALASLHAMA 366


>gi|320095413|ref|ZP_08027091.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977656|gb|EFW09321.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 437

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 146/396 (36%), Positives = 210/396 (53%), Gaps = 52/396 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++    +   + + P  + +Y+CG TV    H+G+ R  + FD L R LR    E 
Sbjct: 1   MRLYDSKTASVRPLEPVVPGEVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++ Q                +  ++F      L   APT++PR
Sbjct: 60  -VTYVRNVTDIDDKILTKSAQAGWDW------WAWAYRYEREFTSAYDALGVQAPTYEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKI-------DEQKMG 176
           AT HIP  I L++ ++  GHAY+     + FD  S P+YGS +R+++       DE ++ 
Sbjct: 113 ATGHIPDQIDLVRRLVERGHAYDDGAGNVYFDVHSQPDYGSLTRQRLADMRTTEDEAQID 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
             V  +  K++P DF LWK + P EP    W+SPWGRGRPGWH+ECSAMS  YLG  FDI
Sbjct: 173 AAV--EAGKRDPRDFALWKATKPGEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDI 230

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL FPHHENE AQS  A      A +W+HN ++  +G KMSKS GN +++  L  
Sbjct: 231 HGGGIDLRFPHHENEQAQSHGAGW--AFARMWVHNAWVTTKGEKMSKSLGNVLSLEALT- 287

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--TSKGI----- 346
                 R  PA  +R A+   H+R  I++  + L  A    S W + S   S+ I     
Sbjct: 288 ------RDHPAVAVRWALSTVHHRSAIEWGPETLDNA---ASAWARFSGFVSRAIEAVGE 338

Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHK 370
                       +  A   A+ +DLN   A+   H+
Sbjct: 339 AGAEEVAIPADGLPAAFREAMDDDLNVAGALAVAHE 374


>gi|226226241|ref|YP_002760347.1| cysteinyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089432|dbj|BAH37877.1| cysteinyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 473

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 162/491 (32%), Positives = 246/491 (50%), Gaps = 56/491 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           + ++YNTL R++  F  +D   +RMY CGPTVY+ AH+GN R  +  D+L R++R    +
Sbjct: 3   EFRLYNTLTRRVEPFAPVDGQTVRMYTCGPTVYNPAHLGNFRTFLFEDLLRRVIRLAGWQ 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V N+TD+DDKII +A            I  +T   T  F +D   L        P
Sbjct: 63  --VEQVMNLTDVDDKIIRKA------AATGQDILQVTEPFTALFHQDRRYLRIEDAERYP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE- 181
           +AT H+P+MI L++ ++ +G AY A +  + F      +YG  S+    E K G RV + 
Sbjct: 115 KATEHVPEMIELVERLVANGVAYTAEDGSVYFAIDRFADYGKLSQLDKRELKSGARVAQD 174

Query: 182 KYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +Y K+N  DF LWK + P +      W+SPWGRGRPGWH+ECSAM+  YLG+ FD+H GG
Sbjct: 175 EYAKENAQDFALWKSAKPEDEATGAAWDSPWGRGRPGWHLECSAMAMKYLGETFDLHAGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DLIFPHHE+EIAQS  A   ++ A  W H  FL  +G KM+K  GN   + EL E    
Sbjct: 235 IDLIFPHHEDEIAQSEAATG-KQFARCWCHGEFLLTDGAKMAKRIGNVANVVELREQGIS 293

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---DPAVL-- 352
           G       V R  +   HYR+ ++ T   L ++   +++    +   G      PA++  
Sbjct: 294 G------TVYRHFVFNAHYRKQLNLTEDSLEQSRAAVNRIGAFARRLGEATHGTPALVVV 347

Query: 353 ---------SALYNDLNTVSAIQALHKLARESTKNHDLL---PIFNASAHILGIEVCKEH 400
                    +AL+ DLN   A+ AL     ++ +  D+    P    +A +         
Sbjct: 348 AERAEQEFYAALFEDLNAPEALAALFTFISDANRELDIAVAEPAVGDTAALERARTAFRL 407

Query: 401 LNKNISIAIEKLVQERLI------------LLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           ++  + +  E+L    L               + + F++AD IR +L  +  ++ED    
Sbjct: 408 MDSVLDLVPEQLTDGELADWVEERLAARRAARERRDFAAADAIRVELTERNILIED---- 463

Query: 449 DNGQRMTRWKQ 459
             G   TRW++
Sbjct: 464 --GPAGTRWRR 472


>gi|298206748|ref|YP_003714927.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849379|gb|EAP87247.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 495

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 174/492 (35%), Positives = 255/492 (51%), Gaps = 56/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K ++IYN+L  +   F+ ID  ++ MYVCGPTVY   H+GN R  I FD+++R L++  G
Sbjct: 7   KNLQIYNSLSGQKEIFKPIDEHHVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +D+I ++AR E    P+      +  + T  F     
Sbjct: 66  YK-VRYVRNITDAGHLENDAEVGEDRIAKKARLEQIE-PME-----VVQRYTVDFHNTLG 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
           +   L P+ +P AT HI + I +I++II  G AYEAN  + FD    +S  NYG  S RK
Sbjct: 119 KFNNLPPSIEPTATGHIVEQIEIIKDIIDKGFAYEANGSVYFDVLKYNSSNNYGILSGRK 178

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  KKNP DF LWK++ P     W SPW  G PGWH+EC+ MS+ YL
Sbjct: 179 LEDMIANTRELAAQSDKKNPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DL FPHHE EIAQ   A   +   N W+H   L L G+KM+KS GN+I 
Sbjct: 239 GEQFDIHGGGMDLKFPHHECEIAQGKAASG-KDPVNYWMHANMLTLNGKKMAKSTGNYIL 297

Query: 288 INELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----------LLSK 336
            NE+         +++   V+R +ML  +YR  +DF+ + L  +E           +L  
Sbjct: 298 PNEMFTGDNDILSKAYLPSVVRFSMLQANYRSILDFSDEALLASEKGYFKLMTAINMLDS 357

Query: 337 WPQTSTSKGIIDP---AVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASA- 389
            P ++TS   ++    +  +A+ +D N+   I  L    KL      N D +   N S  
Sbjct: 358 LPTSNTSSIDVETWKNSCYTAMNDDFNSPVLIAKLFDAVKLINTVNDNKDTITKENLSIL 417

Query: 390 ---------HILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                     +LG+E        +  +  +S  +E L+Q R      K F+++D IR +L
Sbjct: 418 KETLNAFVFDVLGLENANSNTATDSSSDKLSGTLELLIQLRAEARANKDFATSDKIRDEL 477

Query: 436 ESKGFILEDYKN 447
                 L+D K+
Sbjct: 478 AKLDIELKDGKD 489


>gi|307564821|ref|ZP_07627349.1| cysteine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346543|gb|EFN91852.1| cysteine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 495

 Score =  253 bits (645), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 172/496 (34%), Positives = 252/496 (50%), Gaps = 61/496 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   ++ MYVCGPTVY   H+G+ARP I FD+L+R L++  G
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T  +     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIAKKARLEQLE-PME-----IAQHYTNSYHDAMH 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRK 169
            L  L P+ +P AT HI +   L++ II +G+AY++N  + FD +       YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEQLVEEIINNGYAYQSNGSVYFDVAKFNEKHKYGVLSGRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    +R +     K+N  DF LWKR+ P     W S W  G PGWH EC+AM   YL
Sbjct: 174 LNDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSQWSEGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DL+FPHHE EIAQ+  A + +     W+HN  + + G+KM KS GNFIT
Sbjct: 234 GNHFDIHGGGIDLVFPHHECEIAQA-VASQGDDMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLS-----KW 337
           +NE    K K   +++    IR  ++  HYR  +DF+   L  A    E L++     K 
Sbjct: 293 LNEFFSGKHKSLDQAYSPMTIRFFIISAHYRSTVDFSNDALKAAQKGYEKLMNGIEDLKK 352

Query: 338 PQTST---------------------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
            QTST                     +  ++ PAV+S L+   + ++ +   HK     +
Sbjct: 353 IQTSTESDANTKMFVNSLRKKCYDAMNDDLMTPAVISLLFEACHVINLL-IDHKAQISLS 411

Query: 377 KNHDLLPIFNASA-HILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
            + +L  + N  A  ILG+     +  E   +     ++ +++ R      K ++ +D I
Sbjct: 412 DSKELTEVMNIFAFDILGLRNERSINNEAREEAFGKVVDMVLELRAKAKAEKNWAVSDQI 471

Query: 432 RKQLESKGFILEDYKN 447
           R  L   GF ++D K+
Sbjct: 472 RNALSEAGFQVKDTKD 487


>gi|327334964|gb|EGE76675.1| cysteine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 487

 Score =  252 bits (644), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 166/486 (34%), Positives = 235/486 (48%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 14  FKLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 67

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 68  CSGYRVTVVANVTDIDDKILAK------SAAAGTPWWAHAYHYENELHAAYKALGCRPPT 121

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE     
Sbjct: 122 YEPRATGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAE 181

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 182 DSDPR-GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIH 240

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A+ W+HN ++ + G KMSKS GN   ++E+  T
Sbjct: 241 GGGIDLRFPHHENELAQSAAAGR--PFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEV--T 296

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSK-----------W 337
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 297 KTYSPRA-----VRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLV 351

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNAS 388
            +  T+   +  A + A+ +DL T  A+ AL     E  K+  +         L    A 
Sbjct: 352 GEQVTASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAM 411

Query: 389 AHILGIE----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             + G++               L   +   ++ ++ +R      K +++AD IR  L + 
Sbjct: 412 LAVFGLDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNL 471

Query: 439 GFILED 444
           G  +ED
Sbjct: 472 GLTIED 477


>gi|224542354|ref|ZP_03682893.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524736|gb|EEF93841.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
           15897]
          Length = 468

 Score =  252 bits (644), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 163/466 (34%), Positives = 245/466 (52%), Gaps = 48/466 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  K  EF+ I+   + +Y+CGPTVY+ AHIGN RPMIVFDVL R   Y   + 
Sbjct: 22  MRLFNTLTNKKEEFKPIEEGKVSIYICGPTVYNHAHIGNTRPMIVFDVLRRTFEYLGND- 80

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V N TD+DDKII+ A+ E  +         +T K  + +      L    PT++PR
Sbjct: 81  -VTFVSNYTDVDDKIIKAAKAEGIT------EKELTDKYIKAYEDVRAGLNIEDPTYKPR 133

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TRVP 180
            T  +P++I  IQ +I  G+AYE + ++ F  + +  YG  S  K+++   G    T   
Sbjct: 134 VTETMPEIIDFIQALIDKGYAYEVDGDVYFRVTKVKEYGMLSGIKVEDLIAGASDRTLSV 193

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVFDIHGGGL 238
           +   K++  DF LWK+ T     +++PW +GRPGWH EC  M +     GK+ DIHGGG 
Sbjct: 194 DDKKKESTTDFALWKK-TDEGIQFDTPWSKGRPGWHTECVVMINKLFKDGKI-DIHGGGQ 251

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS   +     AN W+HN  +N++G KMSKS GN +   +L+   +FG
Sbjct: 252 DLKFPHHENEIAQSMAYNG-HPIANYWMHNQMINIDGEKMSKSLGNVLWAKDLI--VEFG 308

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTST 342
                  V +  ML THYR P++ TV  +      +SK                 P    
Sbjct: 309 -----CNVFKWLMLSTHYRNPLNLTVDVIAGVRKEVSKVENATKNASLYLQVNHVPAHDY 363

Query: 343 SKGIIDPAVLSALYNDLNT-------VSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
            K  +D A+++AL +DLNT       +  ++ L+++ R   K++D++    A+   +G  
Sbjct: 364 KKETVD-AMVNALEDDLNTSLALTQILDQVKVLNQVMRVREKDNDVIATEYATLVKMGDV 422

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +        +S     L +E     K K F  AD +RK+L  +G +
Sbjct: 423 LGFLFEGTKLSEEDIALYEEWNAYKKEKNFDEADRVRKELTERGIL 468


>gi|118466391|ref|YP_879853.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254773531|ref|ZP_05215047.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|166200182|sp|A0QAB5|SYC_MYCA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118167678|gb|ABK68575.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 468

 Score =  252 bits (644), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 156/477 (32%), Positives = 234/477 (49%), Gaps = 54/477 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYY 60
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L+   
Sbjct: 4   RPRLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIALG 63

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y    V ++RN+TDIDDKI+ +A                 +   + F      L  L P+
Sbjct: 64  YD---VAFIRNVTDIDDKILNKA------AAAGRPWWEWAATYERAFSAAYDALDVLPPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT HI QM+ LI+ +I  GHAY  + ++ FD  S P YG  S  +ID+   G  V 
Sbjct: 115 AEPRATGHITQMVELIERLIEKGHAYTGDGDVYFDVLSYPEYGQLSGHRIDDVHQGEGVA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH EC AM+  YLG  FDIH GG+DL
Sbjct: 175 SG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMAHEYLGPEFDIHCGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  +L+      R
Sbjct: 233 VFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQ------R 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPA--- 350
             PA  +R  +   HYR  ++F+   L +A       E  L +        G ++P    
Sbjct: 285 VRPAE-LRYYLGSAHYRSMLEFSDTALQDAVKAYVGVEEFLHR---VRVRVGAVEPGEPT 340

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKE 399
                AL +DL   +A+  +H+   E  +  D               A   ILG +   E
Sbjct: 341 PRFADALNDDLAVPAALAEVHQARAEGNRALDSGDHEGALRQARSIRAMMGILGCDPLHE 400

Query: 400 HLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                         + + +   +Q R    + + ++ AD IR +L+  G  + D  +
Sbjct: 401 RWETRDESSAALAAVDVLVRAELQNREKAREQRNWALADEIRNRLKQAGIEVTDTAD 457


>gi|170290560|ref|YP_001737376.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174640|gb|ACB07693.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 472

 Score =  252 bits (644), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 150/476 (31%), Positives = 242/476 (50%), Gaps = 61/476 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++NTL R+   F+ +    + M+VCGPTVYD++H+G+AR  + +D L R LR       +
Sbjct: 9   VFNTLTRRFEPFEPLVGRRVFMFVCGPTVYDYSHLGHARTYVFYDTLARFLRKL--GYSL 66

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++NITD+DDKI+ RA +E    P+      +  +    + +D   L   +     RA+
Sbjct: 67  FYLQNITDVDDKIVNRAAEEGRD-PVE-----LAREFESYYYEDMRALNITSVNLYARAS 120

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           +++ ++   ++ +I  G AY   + + FD ++ P+YG  S ++ +E ++  R+     K+
Sbjct: 121 DYLKEIFEQVETLIKLGKAYVTESGVYFDITTFPDYGKLSGQRPEELRV-HRIEPDPTKR 179

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF LW+     E GWESPWG GRPGWHIE +A+S  + GK +DIHGG ++L FPHHE
Sbjct: 180 NPGDFALWRNRPREEFGWESPWGYGRPGWHIEDTAISIKHFGKQYDIHGGAIELAFPHHE 239

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            EIAQ+      +     WIH G L +EG KMSKS GNF+TI E L       R + A  
Sbjct: 240 AEIAQAESFTGEKPFVKYWIHTGLLTVEGEKMSKSLGNFVTIREAL-------REYDANT 292

Query: 307 IRLAMLMTHYREPIDF-----------------TVQRLTEAEI---------LLSKWPQT 340
           +R+ +L  HYR PIDF                  ++ L E EI          LS+  + 
Sbjct: 293 LRIFLLSRHYRSPIDFRWEYLEQARSSYERIINCLENLKELEIGEEGDEEREFLSRVRER 352

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARE------------STKNHDLLPIFNAS 388
             S           + +D+NT  A+  L++L R+                ++++  F+  
Sbjct: 353 RDS-------FYRRMLDDVNTAEALGELYELVRDVNSFSERMGKISEAGRNEVISTFSEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +LG+ + +      +   I  ++  R  L + +++  AD IR ++   G  ++D
Sbjct: 406 LDLLGLRIEEGPDTSMLHALISLILDVRENLRRRREYDLADEIRGRMRELGIDVQD 461


>gi|258648227|ref|ZP_05735696.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852123|gb|EEX71992.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 495

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 171/492 (34%), Positives = 252/492 (51%), Gaps = 57/492 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ I+NTL RK  EF+ + P  + MYVCGPTVY   H+G+ARP I FD+L+RLL+   G 
Sbjct: 5   KLFIHNTLTRKKEEFKPLHPGRVGMYVCGPTVYGDPHLGHARPAITFDLLFRLLKNE-GY 63

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           K V YVRNITD+          +DKI ++A+ E    P+      +    + +F K    
Sbjct: 64  K-VRYVRNITDVGHLEHDADEGEDKIAKKAKLEQLE-PME-----VAQHYSNRFHKAMDD 116

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKI 170
           L  L P+ +P+A+ HI +   L+Q I+ +G+AYE N  I FD         YG  S R +
Sbjct: 117 LNVLPPSIEPQASGHIIEQEALVQKILDNGYAYERNGSIYFDVEKYNTKYRYGILSGRNL 176

Query: 171 DEQKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           ++    +R  +    K+N  DF LWK++ P     W SPWG G PGWH EC+AM   YLG
Sbjct: 177 EDTIDASRTLDGVDEKRNQVDFALWKKARPEHIMRWPSPWGDGFPGWHCECTAMGRKYLG 236

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDIHGGG+DL+FPHHE EIAQ+  A+  E+    W+HN  + + G+KM KS GNFIT+
Sbjct: 237 DHFDIHGGGMDLVFPHHECEIAQAVAAEG-EQMVRYWMHNNMITINGQKMGKSLGNFITL 295

Query: 289 NELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
            +             +P+ IR  +L  HYR  +DF+          + RL E    L + 
Sbjct: 296 EQFFTGDHPKLDQPYSPMTIRFFILQAHYRSTVDFSNEALQASRKGLDRLMEGFATLGRL 355

Query: 338 PQ------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLLP 383
                   T +    +     +AL +DLN+   I  L    R        ++T   D L 
Sbjct: 356 AGNDGGEITESYAEALSERCYAALNDDLNSPIVISHLFDACRLINQVAYKQTTITPDGLE 415

Query: 384 ----IFNASA-HILGIEVCKE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               +F+  A  +LG++   +      ++   A++ L+  R      K ++++D IR  L
Sbjct: 416 ALKRVFSLFAFDLLGLKPEADGNAQREESFGKAVDLLLDVRQQAKAAKDWATSDKIRDDL 475

Query: 436 ESKGFILEDYKN 447
            + GF ++D K+
Sbjct: 476 AALGFAVKDTKD 487


>gi|300727688|ref|ZP_07061075.1| cysteine--tRNA ligase [Prevotella bryantii B14]
 gi|299775052|gb|EFI71657.1| cysteine--tRNA ligase [Prevotella bryantii B14]
          Length = 496

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 174/502 (34%), Positives = 254/502 (50%), Gaps = 69/502 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+ +   N+ MYVCGPTVY  AH+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQHLLIYNTLTRTKELFKPLHAPNVGMYVCGPTVYGDAHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I    T ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQYYTNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P AT HI +   L+Q I+ +G+AYE+N  + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHATGHIIEQEQLVQQILDNGYAYESNGSVYFDIEKYDKDHKYGILSH 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R + +    +R +     KKN  DF LWK++TP     W SPWG G PGWH EC+AM   
Sbjct: 173 RNLTDMINNSRELNGVGEKKNQVDFALWKKATPEHIMRWPSPWGDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+++          +++    IR  +L  HYR  +DF+           +RL  A   L
Sbjct: 292 ITLDQFFTGNHASLDQAYSPMTIRFFILSAHYRGTVDFSNEALLAAQKGYERLMNAIDDL 351

Query: 335 SKWPQTSTS--------------------KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
           S+    +TS                       + P V+S L+   + +++I     L  +
Sbjct: 352 SRVQVVATSDEPTAKFVKELRQRCYDAMNDDFMTPLVISYLFEACHLINSI-----LDHK 406

Query: 375 STKNHDLLPIFNASAH-----ILGIEVCKEHLNKNISIAIEKLVQERLILL----KMKKF 425
           +  + D L     + H     +LG++  K   N     A  K+V   L L       K +
Sbjct: 407 ANISADDLKELTDTMHLFTFDLLGLKNEKGANNDAREEAYGKVVDMVLDLRAKAKASKDW 466

Query: 426 SSADYIRKQLESKGFILEDYKN 447
           +++D IR  L   GF ++D K+
Sbjct: 467 ATSDQIRDMLADAGFEIKDTKD 488


>gi|297748910|gb|ADI51456.1| Cysteinyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749790|gb|ADI52468.1| Cysteinyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 500

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/485 (35%), Positives = 242/485 (49%), Gaps = 65/485 (13%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 28  LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 83

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 84  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 137

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 138 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 197

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 198 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGGVDN 257

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 258 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 315

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 316 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 370

Query: 354 A-----------LYNDLNTVSAIQALHKLARESTKNHD---------------------L 381
           A           L NDLN  S++ AL    R+   + D                     +
Sbjct: 371 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQHI 430

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+ F 
Sbjct: 431 LALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRSFA 487

Query: 442 LEDYK 446
           +ED K
Sbjct: 488 IEDGK 492


>gi|223040210|ref|ZP_03610489.1| cysteinyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878571|gb|EEF13673.1| cysteinyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 462

 Score =  252 bits (643), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 166/472 (35%), Positives = 242/472 (51%), Gaps = 52/472 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+++++RK  EF+ +    +R+YVCGPTVYD AH+G+A+  I FDVL R L    G K
Sbjct: 1   MQIFDSVKRKKVEFEPVKSDFVRIYVCGPTVYDDAHLGHAKSAISFDVLRRTLS-ELGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TDIDDKI+++  +   S+        IT +    + +D + L  L P  +P+
Sbjct: 60  -VKFVRNYTDIDDKILKKMSESGESLK------SITDRYIASYERDMSALNVLEPDVKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + +MI  I+ ++ +G AYE   + I FDT+    Y S S  K D +    RV    
Sbjct: 113 ATQTLKEMIEYIEILLKNGFAYEIKGDGIYFDTAKDAQYLSLS-GKFDTEANVARVASSD 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVF--DIHGGGLD 239
            KK+  DF+LWK     E  +ESP+GRGRPGWH EC AM   +L  G+ F  DIH GGLD
Sbjct: 172 EKKDEKDFVLWKFD---EKWYESPFGRGRPGWHTECVAMIKKHLSSGEKFEIDIHAGGLD 228

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ  CA+R +  A  W+HNGF+ +   KMSKS GN   + + LE +  G 
Sbjct: 229 LLFPHHENEAAQCRCAER-KSLAKYWLHNGFIQVNNEKMSKSLGNSFFVKDALE-RNLG- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDP 349
                  +R  ++ +HYR   +F+   L  A+  L K               ++      
Sbjct: 286 -----EAVRFYLISSHYRANFNFSEDDLNAAKKRLDKIYRLKKRVLGAAANLSANEKFKS 340

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-----------AHILGI---- 394
             +SA+ +DLNT  A+ ++ +  R +    D  P   A            A +LGI    
Sbjct: 341 EFMSAMQDDLNTSKALASVDEFVRSANDELDANPKDKAKKGKIAANLELIARVLGILQID 400

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E  +  ++      IE L+ +R      K +  +D IR  L + G  L D
Sbjct: 401 VFEYFQFGVSDEKRAYIEDLINQRNEAKAAKNYELSDKIRDMLAANGISLMD 452


>gi|152990845|ref|YP_001356567.1| cysteinyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166225301|sp|A6Q401|SYC_NITSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151422706|dbj|BAF70210.1| cysteinyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 465

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/471 (36%), Positives = 248/471 (52%), Gaps = 51/471 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY++ +++    + +   +I++YVCGPTVYD AH+G+AR  I FD+L R L    G K  
Sbjct: 3   IYDSSKKEYCSLEPLKNRHIKVYVCGPTVYDDAHLGHARSAIAFDLLRRTLN-ALGYK-T 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+++N TDIDDKII++  +   S      +  ITS   Q++++D   L       +P+AT
Sbjct: 61  TFMKNFTDIDDKIIKKMNETGKS------LQEITSYYIQRYLEDMEALGVQRADIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  MI +I+ ++    AY+  N +I FDTS    Y + S  K DE+ M +R+     K
Sbjct: 115 QNLDAMIDMIERLLQKECAYQTPNGDIYFDTSKDEKYCTLS-HKCDEESM-SRIEPNPDK 172

Query: 186 KNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGGLD 239
           KNPADF LWKR     +  ++SP+G+GRPGWHIECSAM   +L         DIH GG D
Sbjct: 173 KNPADFALWKRCKGEGDVCFDSPFGKGRPGWHIECSAMIDKHLAYHDTPFQIDIHAGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+ CA   E  A  W+HNGF+ + G KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEAAQTRCACNQE-LAKYWMHNGFVTISGEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPA 350
           + +   ++R  +L THYR  ++F  + L  ++  L K           Q ST +      
Sbjct: 285 KVYDGEILRFYLLSTHYRSDLNFNEEDLLASKKRLDKLYRLKKRVYGVQASTPQKEFVDE 344

Query: 351 VLSALYNDLN---TVSAIQALHKLARESTKNHDLLPIFNAS--------AHILGIEVCKE 399
           +L AL  DLN   T++AI      A E   N+     F           + +LGI     
Sbjct: 345 LLQALSQDLNISKTLAAIDQFIAYANEHLDNNPKDKAFKKQIVANIEYISKLLGIGHKDA 404

Query: 400 HLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   ++ I+      IE+L+++R    K K F  AD IR++L S G  + D
Sbjct: 405 YSYFHLGISEEEKQKIEELIEKRTTAKKEKNFQLADSIREELRSMGIAIMD 455


>gi|302671187|ref|YP_003831147.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
 gi|302395660|gb|ADL34565.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
          Length = 474

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/483 (35%), Positives = 240/483 (49%), Gaps = 58/483 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  K   YNTL RKI EF   +   + MY CGPTVY FAHIGN R  I+ DVL + L Y 
Sbjct: 1   MSHKFTFYNTLSRKIEEFNPREEGKVSMYTCGPTVYHFAHIGNIRTYIMQDVLIKALGY- 59

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
                V  V NITD+          +DK++  A++EH ++        I    T  F KD
Sbjct: 60  -AGYDVKRVMNITDVGHLSSDADTGEDKMLAGAKREHKTV------MEIAKFYTDAFFKD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              +    P     ATN IP+ I++++ ++  G+AY A   + FDTS + +Y  FS    
Sbjct: 113 FDAVGNKRPDVVEPATNCIPEFIHMVEVLLEKGYAYVAGGNVYFDTSKLQDYYVFSSEVE 172

Query: 171 DEQ-KMGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
            EQ ++G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S 
Sbjct: 173 KEQLQVGVRDDVEEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISM 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +LG+  DIH GG+D IFPHH NEIAQS      E     W H+  LN +  KMSKS G 
Sbjct: 233 KHLGEYIDIHCGGVDNIFPHHTNEIAQSESYLGHE-WCKYWFHSNHLNDKSGKMSKSKGA 291

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
            +T++ L E      + +   V R   L +HYR+P++F+ + L +A    +K  +  +  
Sbjct: 292 VLTVSVLQE------KGYDPLVYRFFCLQSHYRKPLEFSYEALDQAAQAFNKLVKRVSEL 345

Query: 343 -SKGIIDPAV--------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
              G +D A           A+ NDLNT  AI  L+ + +    +   L +  +   +L 
Sbjct: 346 KEDGAVDTAAKEKFEENFRDAVSNDLNTSMAITVLYDVLKADINDATKLALVESFDKVLS 405

Query: 394 IEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +++                L K I  AIE+    +    K K F++AD IR +L  KG  
Sbjct: 406 LDLLGHAKAVSEGPSVDPELEKFILDAIERRANAK----KAKDFATADAIRAELLEKGVE 461

Query: 442 LED 444
           ++D
Sbjct: 462 IKD 464


>gi|294675457|ref|YP_003576073.1| cysteine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474025|gb|ADE83414.1| cysteine--tRNA ligase [Prevotella ruminicola 23]
          Length = 496

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/497 (34%), Positives = 245/497 (49%), Gaps = 59/497 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+++R L++ 
Sbjct: 1   MESKLVIYNTLTRQKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDLVFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      I    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE-PME-----IAQYYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P AT HI +   L+Q I+ +G AYE+N  I FD  +      YG  S 
Sbjct: 113 MDALNVLRPSIEPHATGHIIEQQQLVQQILDNGFAYESNGSIYFDIEAYNKKFQYGILSG 172

Query: 168 RKIDEQKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R ++  K  +R  +    K+N ADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RSLENVKDASRELDGVGEKRNQADFALWKKAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL+FPHHE EIAQ+  A         W+HN  L + G+KM KS  NF
Sbjct: 233 YLGEEFDIHGGGMDLVFPHHECEIAQA-QASMGHPAVKYWMHNNMLTINGQKMGKSYNNF 291

Query: 286 ITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
           IT+ +          +++    IR  +L  HYR  +DF+ + L  AE  L K        
Sbjct: 292 ITLEQFFTGNHPLLKKAYSPMTIRFFVLSAHYRGTVDFSNEALEAAEKGLEKMMNAIADL 351

Query: 338 ----------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA--------RESTKNH 379
                      +T      +      A+ +DL T   I  L +           ++T   
Sbjct: 352 ERVQVADKCDAETEKVVKALRQKCYDAMNDDLATPQVISYLFEACTVVNKLTDHKATICA 411

Query: 380 DLLPIFNASAH-----ILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSADY 430
           D L     + H     ILG++  K   N     A  K++   L L       K ++++D 
Sbjct: 412 DCLQELKETMHLFAEDILGLKAEKSGTNDEREAAFGKVMDMVLELRAKAKADKDWATSDK 471

Query: 431 IRKQLESKGFILEDYKN 447
           IR +L + GF ++D K+
Sbjct: 472 IRDELAAAGFEVKDTKD 488


>gi|15605515|ref|NP_220301.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|255311617|ref|ZP_05354187.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317918|ref|ZP_05359164.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|3329246|gb|AAC68377.1| Cysteinyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|296437262|gb|ADH19432.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 497

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/485 (35%), Positives = 242/485 (49%), Gaps = 65/485 (13%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 25  LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 80

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 81  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 134

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 135 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 194

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 195 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGGVDN 254

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 255 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 312

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 313 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 367

Query: 354 A-----------LYNDLNTVSAIQALHKLARESTKNHD---------------------L 381
           A           L NDLN  S++ AL    R+   + D                     +
Sbjct: 368 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQHI 427

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+ F 
Sbjct: 428 LALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRSFA 484

Query: 442 LEDYK 446
           +ED K
Sbjct: 485 IEDGK 489


>gi|27904909|ref|NP_778035.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|27904307|gb|AAO27140.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 469

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 236/468 (50%), Gaps = 44/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+  R   + +      I MYVCG T YDF HIG+ R  I FDV+ R LR      
Sbjct: 7   LKIFNSYTRLQEQLEVDKKKTINMYVCGITAYDFCHIGHGRTFIFFDVVVRYLRSL--GY 64

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII        S+  N++   ++++       D + L  L P  +PR
Sbjct: 65  ALKYVRNITDIDDKIIA------ASLKNNESYISLSNRMISNMKDDFSALNILPPDSEPR 118

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T +I  +I  I  ++   HAY A N +I+F  SS  NYG+ S +          +    
Sbjct: 119 VTENISDIIKFISILLNKKHAYVACNGDIMFSVSSYLNYGALSNQFSKILNKEINISHYS 178

Query: 184 HKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKN ADF LWK S + +  GW SPWG GRPGWHIECS+M         DIHGGG+DL+F
Sbjct: 179 TKKNIADFALWKTSKSSIFVGWNSPWGNGRPGWHIECSSMCRSAFKNKIDIHGGGVDLLF 238

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C D    +   W+H G + +   KMSKS  N + + +LL         +
Sbjct: 239 PHHENELAQSVCIDS-NFSIKHWMHTGLVIINNEKMSKSLNNTLLLRDLLT-------QY 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KG--IID---PAVL 352
            + +IR  +L THYR P+ F  + L+ +  LL K   +        KG  I+D       
Sbjct: 291 DSEIIRFFLLSTHYRHPLYFCYKNLSNSSKLLKKLYLSLRGVDFDIKGLDIVDNFKTDFY 350

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEV------CK 398
            A+ +D NT  A+  L +L++E        S K   L         ILGI +       +
Sbjct: 351 KAMNSDFNTPLALSILLRLSKEINKFKLIDSNKASQLASKLRQLGSILGILLKDPEYFLQ 410

Query: 399 EHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + N N SI   I  L+ ER    ++K +  AD IRK+L   G +LED
Sbjct: 411 NNFNCNNSIIGKINSLIYERDKARRVKDWVRADRIRKELLELGIVLED 458


>gi|149369775|ref|ZP_01889626.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356266|gb|EDM44822.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 493

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 161/496 (32%), Positives = 252/496 (50%), Gaps = 64/496 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++ IYN+L +    F  I+   + +YVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   EQQVHIYNSLTKAKEVFTPINEGAVGLYVCGPTVYSNVHLGNCRTFLSFDLVFRYLKHL- 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            +  V YVRNITD           DD I ++AR E+   P+      +  K T  F    
Sbjct: 65  -DYKVRYVRNITDAGHLENDGESGDDPIAKKARLENIE-PME-----VVQKYTVDFHDTM 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRR 168
            +     P+ +P AT HI + I ++Q+II  G+ YE N  + FD +      +YG  S R
Sbjct: 118 AKFNAFPPSIEPTATGHIIEQIEIVQDIIKKGYGYEKNGSVYFDVTKFNEDHDYGKLSGR 177

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +++    +R +  +  KKNP DF LWK++ P     W SPW  G PGWH+EC+AMS+ Y
Sbjct: 178 NLEDMVSNSRELAGQSEKKNPQDFALWKKAEPKHIMRWPSPWSDGFPGWHLECTAMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG+DL FPHHE EIAQ+   +  E   N+W+H   L L G+KMSKS GN I
Sbjct: 238 LGNKFDIHGGGMDLKFPHHECEIAQAEACNN-ESPVNVWMHANMLTLNGKKMSKSTGNNI 296

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------------- 331
             +EL+        +++PA V +  M   HYR  +DF+ + L  +E              
Sbjct: 297 LPSELISGNNDILNKAFPATVAKFFMYQAHYRSILDFSNEALEASEKGYNRLMESYRNID 356

Query: 332 ---------ILLSKWPQT---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                    + +S W Q+   + +     P +++ L+     ++ ++  ++   E+ K  
Sbjct: 357 ALPVSEMTSMNVSTWKQSCYDAMNDDFNSPILIAQLFEATKFINGVKDGNEKLSETDK-- 414

Query: 380 DLLPIFNASAH-----ILGIE-VCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYI 431
               +  ++ H     +LG+E V  E    +  +  A+  L+Q R      K ++ +D I
Sbjct: 415 ---ALLKSTMHAFIFDVLGLEDVSMEGSGDSSKLEGAMNLLIQLRNEARANKDWAKSDEI 471

Query: 432 RKQLESKGFILEDYKN 447
           R QL+  G  L+D K+
Sbjct: 472 RDQLQEIGIQLKDGKD 487


>gi|29427401|sp|P59421|SYC_BUCBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 464

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 172/468 (36%), Positives = 236/468 (50%), Gaps = 44/468 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+  R   + +      I MYVCG T YDF HIG+ R  I FDV+ R LR      
Sbjct: 2   LKIFNSYTRLQEQLEVDKKKTINMYVCGITAYDFCHIGHGRTFIFFDVVVRYLRSL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII        S+  N++   ++++       D + L  L P  +PR
Sbjct: 60  ALKYVRNITDIDDKIIA------ASLKNNESYISLSNRMISNMKDDFSALNILPPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T +I  +I  I  ++   HAY A N +I+F  SS  NYG+ S +          +    
Sbjct: 114 VTENISDIIKFISILLNKKHAYVACNGDIMFSVSSYLNYGALSNQFSKILNKEINISHYS 173

Query: 184 HKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKN ADF LWK S + +  GW SPWG GRPGWHIECS+M         DIHGGG+DL+F
Sbjct: 174 TKKNIADFALWKTSKSSIFVGWNSPWGNGRPGWHIECSSMCRSAFKNKIDIHGGGVDLLF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C D    +   W+H G + +   KMSKS  N + + +LL         +
Sbjct: 234 PHHENELAQSVCIDS-NFSIKHWMHTGLVIINNEKMSKSLNNTLLLRDLLT-------QY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KG--IID---PAVL 352
            + +IR  +L THYR P+ F  + L+ +  LL K   +        KG  I+D       
Sbjct: 286 DSEIIRFFLLSTHYRHPLYFCYKNLSNSSKLLKKLYLSLRGVDFDIKGLDIVDNFKTDFY 345

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEV------CK 398
            A+ +D NT  A+  L +L++E        S K   L         ILGI +       +
Sbjct: 346 KAMNSDFNTPLALSILLRLSKEINKFKLIDSNKASQLASKLRQLGSILGILLKDPEYFLQ 405

Query: 399 EHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + N N SI   I  L+ ER    ++K +  AD IRK+L   G +LED
Sbjct: 406 NNFNCNNSIIGKINSLIYERDKARRVKDWVRADRIRKELLELGIVLED 453


>gi|11467971|sp|O84787|SYC_CHLTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 477

 Score =  251 bits (642), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 170/486 (34%), Positives = 242/486 (49%), Gaps = 65/486 (13%)

Query: 7   IYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +YNTL R+   F  + DP  +++Y CGPTVYD+AHIGN R  I  D+L R+L +      
Sbjct: 5   LYNTLSREKERFLPVNDP--VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFL--GYS 60

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V NITD+DDK +  AR++  S+                F  D   L  L     P A
Sbjct: 61  VYHVMNITDVDDKTLAGARKKGCSL------EKYCQPYIHAFFADLETLHILKADAYPHA 114

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV-PEKY 183
           T++IPQMI  IQ +I  G AY   ++ + F  S  PNYG+ S   ++E +   R+  ++Y
Sbjct: 115 THYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDADEY 174

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K N  DF+LWK   P   G   WESP+G+GRPGWH+ECS MS   LG+  DIH GG+D 
Sbjct: 175 DKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGGVDN 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+ + F G 
Sbjct: 235 IFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD-QGFSGE 292

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +R  +L  HYR  ++FT        Q L      + +    S    II P V +
Sbjct: 293 E-----VRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEVAT 347

Query: 354 A-----------LYNDLNTVSAIQALHKLARESTKNHD---------------------L 381
           A           L NDLN  S++ AL    R+   + D                     +
Sbjct: 348 ACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQHI 407

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+ F 
Sbjct: 408 LALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRSFA 464

Query: 442 LEDYKN 447
           +ED K 
Sbjct: 465 IEDGKT 470


>gi|298377784|ref|ZP_06987734.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265230|gb|EFI06893.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 491

 Score =  251 bits (642), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 256/493 (51%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +          +++ A  IR  +L  HYR  +DF+ + L  AE  LS+  +     
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351

Query: 340 -------TST--SKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLL 382
                  TST  +KG+ +     A+ +DLN+   I  L   AR        ++T + + L
Sbjct: 352 MKLQPSATSTVDTKGLREK-CFEAMNDDLNSPIVISHLFDAARAINSVKDGKATLSEEDL 410

Query: 383 PIFNASAH-----ILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H     ILG++        N    S A++ L+  R      K ++++D IR +
Sbjct: 411 KELQEVFHLFLFDILGMKDEASAGGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTAMGFEIKDTKD 483


>gi|254822713|ref|ZP_05227714.1| cysteinyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 469

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 234/474 (49%), Gaps = 48/474 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWL---I 60

Query: 62  GEKC-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
              C V ++RN+TDIDDKI+ +A       P  +      +   + F      L  L P+
Sbjct: 61  ARGCDVAFIRNVTDIDDKILNKAAA--AGRPWWE----WAATYERAFSAAYDALDVLPPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT HI QMI L+  +I   HAY A  ++ FD  S P YG  S  KID+   G    
Sbjct: 115 AEPRATGHITQMIELMHRLIETEHAYAAGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGAA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL
Sbjct: 175 TC--KRDQRDFTLWKAAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAEFDIHCGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN + I  LL+      R
Sbjct: 233 VFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLAIPALLQ------R 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQ------TSTSKGIIDPAV 351
             PA  +R  +   HYR  ++F+   +Q   +A + + ++             G   P  
Sbjct: 285 VRPAE-LRYYLGSAHYRSMLEFSETALQDAVKAYVGVEEFLHRVRVRVGGVEPGQWTPKF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH---------ILGIEVCKEHLN 402
             AL +DL   +A+  +H    E  +  D      A  H         ILG +   E   
Sbjct: 344 ADALNDDLAVPAALAEVHAARAEGNRALDSGDHDGALRHARAIRAMMGILGCDPLDERWE 403

Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                      + + +   ++ R    + + ++ AD IR +L+  G  + D  +
Sbjct: 404 TRDETSAALAAVDVLVHTELENREKAREQRNWALADEIRDRLKHAGIEVTDTAD 457


>gi|291556370|emb|CBL33487.1| cysteinyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 472

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 172/478 (35%), Positives = 248/478 (51%), Gaps = 54/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  K  EF       + MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F +D T+L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKYYTDAFFEDCTKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT+ I   I +I ++I  G+AYEA   I FDTS +  Y  F+  K ++  
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIEKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S  +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDAQELKWDSPWGVGYPGWHIECSCISMKHLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS  A    K  N W H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQS-EAYLGHKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQ-TSTS 343
            LLE+K +       PVI R   L++HYR+ + FT + L  A    E L++K  Q     
Sbjct: 292 -LLESKGYD------PVIYRFFCLLSHYRKSLVFTYENLDNAKGAYEKLVAKIAQLLKAE 344

Query: 344 KGIIDPAVL--------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           +G +D A          +A+ ND+NT  AI AL+ + +        L +      +L + 
Sbjct: 345 QGEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADATPATKLALIADFDKVLSLS 404

Query: 396 VCKEHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + ++  + N         +   I +L ++R    K K F+ AD +R ++ + G+ +E+
Sbjct: 405 LIEKAKSVNEKPADTAEELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEE 462


>gi|313835565|gb|EFS73279.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
          Length = 476

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/486 (33%), Positives = 236/486 (48%), Gaps = 68/486 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L      +
Sbjct: 3   LKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWL------E 56

Query: 65  C----VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           C    VT V N+TDIDDKI+ +      S                +       L C  PT
Sbjct: 57  CSGYQVTVVANVTDIDDKILAK------SAATGTPWWAHAYHYENELHAAYKALGCRPPT 110

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE     
Sbjct: 111 YEPRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAE 170

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P  F LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 171 DSDPR-GKRDPRGFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIH 229

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE+AQS  A R    A  W+HN ++ + G KMSKS GN   + E+  T
Sbjct: 230 GGGIDLRFPHHENELAQSAAAGR--PFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV--T 285

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF------TVQRLTEAEILLSKWP---------- 338
           K +  R+     +R  +L  HYR  I+F      T   L EA   + +            
Sbjct: 286 KAYSPRA-----VRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLV 340

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-----------LARESTKNH-----DL 381
            +  T+   +  A ++A+ +DL T  A+ AL                E+T++H      +
Sbjct: 341 GEQVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAM 400

Query: 382 LPIFN---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           L +F     +     +    + L   +   +  ++++R      K +++AD IR  L + 
Sbjct: 401 LAVFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNL 460

Query: 439 GFILED 444
           G  +ED
Sbjct: 461 GLTIED 466


>gi|298527059|ref|ZP_07014468.1| cysteinyl-tRNA synthetase 1 [Mycobacterium tuberculosis 94_M4241A]
 gi|298496853|gb|EFI32147.1| cysteinyl-tRNA synthetase 1 [Mycobacterium tuberculosis 94_M4241A]
          Length = 384

 Score =  251 bits (641), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 131/331 (39%), Positives = 189/331 (57%), Gaps = 23/331 (6%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRY 59
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R  L R 
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           Y     V ++RN+TDI+DKI+ +A                 + + + F      L  L P
Sbjct: 64  Y----DVAFIRNVTDIEDKILAKA------AAAGRPWWEWAATHERAFTAAYDALDVLPP 113

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V
Sbjct: 114 SAEPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGV 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+D
Sbjct: 174 AAG--KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQS  A   +  A  W+HNG++ + G KMSKS GN +++  +L+      
Sbjct: 232 LVFPHHENEIAQSRAAG--DGFARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQ------ 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           R  PA  +R  +   HYR  ++F+   + +A
Sbjct: 284 RVRPAE-LRYYLGSAHYRSMLEFSETAMQDA 313


>gi|119358160|ref|YP_912804.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355509|gb|ABL66380.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 484

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 171/493 (34%), Positives = 247/493 (50%), Gaps = 75/493 (15%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYN+L +K  +F+++ P  + MYVCGPTVY  AH+G+A+  + FDV+ R LR+  G + V
Sbjct: 5   IYNSLGKKKEQFESLYPGLVTMYVCGPTVYGHAHLGHAKSYVSFDVVARWLRHI-GFR-V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            YV+NITD+          +DKI  +AR E    P+      I    T+ F +D  RL  
Sbjct: 63  KYVQNITDVGHLTDDGDDGEDKIERQARTEKTD-PME-----IAQFYTRSFYEDMDRLGV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM- 175
             P   P AT HIP+ I LI+ +I   HAY  N  + F   S P YG  S R   +  + 
Sbjct: 117 ERPNIAPTATGHIPEQIALIEKLIASEHAYVVNGNVYFSVDSFPGYGKLSGRTDQDAVLS 176

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVF 231
           G RV  +  K+NP+DF LWK++   EPG    W SPWG G PGWH+ECSAM++ YLG   
Sbjct: 177 GNRVQLRSEKRNPSDFALWKKA---EPGHMMQWHSPWGSGFPGWHVECSAMATKYLGPTI 233

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG++  FPHH+ EIAQS  A   +     W+HN  + + G KM KS  N + + +L
Sbjct: 234 DIHGGGMENKFPHHDCEIAQSEAASG-KPFVRYWMHNNMVTVNGTKMGKSLKNSVNLKDL 292

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SK 344
            +      R  P  VIR  +L +HYR P+D++   +  ++  L K   T           
Sbjct: 293 FK------RVDPV-VIRFFILQSHYRSPLDYSETAIRASQTGLEKLHDTMRRLLQALPGS 345

Query: 345 GIIDPAVL-----SALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
           G ++ +       SA+ +D NT  AI  L   ++      D                   
Sbjct: 346 GELNISAFIDRFESAMNDDFNTPIAISVLFDFSKSLNSALDQECGLSETALDNAKRFLGM 405

Query: 381 ----LLPIFNASAHIL--GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
               LL I    A  L  G+E  ++ L++ ISI ++   + R    + K +  +D IR +
Sbjct: 406 YGTTLLGIIPPEAQPLTTGMENGEKTLDEVISILLDMRKEAR----EQKNYPLSDTIRDR 461

Query: 435 LESKGFILEDYKN 447
           L   G  ++D K+
Sbjct: 462 LLEAGIEVKDTKD 474


>gi|332287758|ref|YP_004422659.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|325506592|gb|ADZ18230.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 444

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 160/454 (35%), Positives = 239/454 (52%), Gaps = 51/454 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MY CGPTVYD+AHIGN R  +  D+L R L ++     V +V NITD+DDK +  A ++ 
Sbjct: 1   MYTCGPTVYDYAHIGNFRTYVFEDLLKRTLLFF--GYSVKHVMNITDVDDKTLAGACKK- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N ++   T+   Q F +D   L  L     PRAT++IPQM+  I+ ++  G AY 
Sbjct: 58  -----NISLDTYTAPFIQAFFEDVATLNILPADTYPRATHYIPQMLEAIRKLLDDGIAYT 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRSTPMEPG-- 203
             +N + F   + P+YG  S+ ++   +  +RV  ++Y K+N +DF+LWK       G  
Sbjct: 113 GQDNSVYFSIKAFPSYGKLSQLQLQNLQCCSRVASDEYDKENLSDFVLWKAYDKKRDGHI 172

Query: 204 -WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            WESP+G+GRPGWH+ECS M+   LG   DIH GG+D IFPHHENEIAQS      +  +
Sbjct: 173 YWESPFGKGRPGWHLECSIMAMELLGSSIDIHAGGVDNIFPHHENEIAQSESLSH-QPFS 231

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             W+H+  L ++G+KMSKS GNF T+  LL+      R +    IR  +L +HYR  ++F
Sbjct: 232 RYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD------RGFSGEEIRYMLLQSHYRMQLNF 285

Query: 323 TVQRLTEAEILL-----------SKWPQTSTSKGIIDPA-------VLSALYNDLNTVSA 364
           T + L      L           S +P+++T    ID           +A+ NDLN  +A
Sbjct: 286 TEEGLIACRQALKRLRDFISRLESPYPESATISEDIDRCGQLFLQDFSNAIANDLNIATA 345

Query: 365 IQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           + +L     ++    D           +L I      +LG+      L   I   + +LV
Sbjct: 346 LASLFDFIHQTNSLIDKSNFTQADSNYVLDIMKKIDTVLGVIPFTTSL--EIPSEVAQLV 403

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +ER +  K K +  AD +R Q+ S G+++ED K+
Sbjct: 404 EEREVARKEKNWKQADVLRNQIASLGYVIEDTKS 437


>gi|290558858|gb|EFD92250.1| cysteinyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 467

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 162/471 (34%), Positives = 247/471 (52%), Gaps = 48/471 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL +K  +F  ID   + MY CGPTVY++ HIGN R  I +D+L R         
Sbjct: 1   MELFNTLSKKKEKFNPIDGKTVSMYTCGPTVYNYVHIGNLRTFIFYDILKRAFEL--EGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+DDK I+ +++   S+   D  ++ T+     F++D  RL        P+
Sbjct: 59  TVQHVMNLTDVDDKTIKGSQETGTSLE--DYTTVYTN----YFMEDLKRLNIKDNIKFPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT +I +M  +I  ++  G+AYEA++ I +D S   +YG  S   ++ +   +R+  + Y
Sbjct: 113 ATENIDEMQSIINELLKKGYAYEADDGIYYDVSKFNDYGKLSGMTVNGKY--SRIKNDDY 170

Query: 184 HKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N ADF LWK  T  +    WE    +GRPGWHIECSAMS  YLGK  D+H G +DLI
Sbjct: 171 DKENAADFALWKYWTENDGKVYWEGKLKKGRPGWHIECSAMSLKYLGKTIDVHCGAVDLI 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   +K  N W+H   L + G+KMSKS GNF T+N+L++      + 
Sbjct: 231 FPHHENEIAQSE-AYTGQKFVNYWVHAEHLLVNGQKMSKSLGNFYTLNDLVQ------QG 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAVL-- 352
           +     RL +L +HYR  +DFT   L +        ++ +    +T   +G  + A +  
Sbjct: 284 FNPLSFRLMVLDSHYRNRLDFTFDSLKKYEKLLKKIDLSIKSLEKTEKYEGNNNNARVQQ 343

Query: 353 -------------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                        +A+ NDL+T SA+ A   L        +   I N    +L   V K 
Sbjct: 344 IQDQVNKLLENFKAAVNNDLDTHSALVAFFSLLDLCDSTAEKGSIDNLEYKLLKDAVDKM 403

Query: 400 ------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 ++   I   +E+L ++R    K K F  AD +R+++  KG+ + D
Sbjct: 404 NGFLGVYVEYEIPKDVEELAEKREEFRKQKNFVEADELRERINGKGYYIAD 454


>gi|77417496|sp|Q7US70|SYC_RHOBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 537

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/426 (35%), Positives = 212/426 (49%), Gaps = 60/426 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL +    F  +    + MY+CGPTVY  +HIG+    ++FD + R L Y   E 
Sbjct: 20  IRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSGYE- 78

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITD+DDK+I ++++    IP+    S I  + T  ++ +   L      H PR
Sbjct: 79  -VTWVVNITDVDDKLIGKSKER--GIPM----SQIAVEMTADYLANLRELGVNQIDHLPR 131

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+PQ+I  I ++   G AY  + ++ FD +  P YG  S R +++Q+ G        
Sbjct: 132 ATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVEDQQ-GEGGGAAAK 190

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+FPH
Sbjct: 191 KRNPGDFALWKSARPGEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLMFPH 250

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSN----------GNFITINELL 292
           HENE AQS C          W+HNG +    +G+   KS+                 ++ 
Sbjct: 251 HENERAQSTCC-HGAPMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASGKIS 309

Query: 293 ETKKFGG-----RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------- 337
            +K  GG     RS     IR  +L T YR  I +  + L EA   L  +          
Sbjct: 310 RSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRFAEI 369

Query: 338 ---------PQTSTSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLARE 374
                      T  + G  DPA               L+A+ +D NT +AI  L    R 
Sbjct: 370 TGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDALRT 429

Query: 375 STKNHD 380
             ++ D
Sbjct: 430 LNRHID 435


>gi|300780461|ref|ZP_07090317.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300534571|gb|EFK55630.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 473

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 150/475 (31%), Positives = 241/475 (50%), Gaps = 56/475 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T  R +  F+     ++ +Y+CG T     HIG+ R  + FD++ R   +      
Sbjct: 4   QIFDTATRTLRAFEPFRDGHVSIYLCGATPQSSPHIGHLRSGVAFDIVRRW--FAANGND 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +VRN+TDIDDKI+ +A  EH   P  + +S       ++F +    L  L P+ +PRA
Sbjct: 62  VAFVRNVTDIDDKILTKA-AEHDR-PWWEWVSTYE----REFSRAYETLGVLPPSVEPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKIDEQKMGTRVPE 181
           T H+ QM+  +Q ++ +G+AY A+  + FD ++      +YGS S  ++++ + G    +
Sbjct: 116 TGHVTQMVDYMQRLMDNGYAYAADGSVYFDVAAWVAAGGDYGSLSGNRVEDMEQGE--TD 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+   DF LWK + P EP W +PWG GRPGWH+ECSAMS+ YLG+ FDIHGGGLDL 
Sbjct: 174 NRGKRGAHDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTWYLGESFDIHGGGLDLK 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS  A   +  A  W+HN ++ + G KMSKS GN ++I+ +LE  +     
Sbjct: 234 FPHHENEQAQSHAAG--DGFARYWMHNHWVTMAGEKMSKSLGNVLSIDRMLEAVR----- 286

Query: 302 WPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVL 352
              PV +R  +   HYR  ++++ + L EA +   +     T    + P        A  
Sbjct: 287 ---PVELRYYLGSAHYRSVLEYSPEALQEAAVAYRRIEDLITRASALAPVEPGQWTDAFA 343

Query: 353 SALYNDLNTVSAIQALHKLARESTK-----NHD----LLPIFNASAHILGIEVCK----- 398
            A+  D +   A+  +H   R + K     + D    L     A A +LG++  +     
Sbjct: 344 DAMNEDFSVPRALAEIHNTVRAANKALAAGDTDEATRLAGAVRAMAGVLGVDPVEWAGRA 403

Query: 399 ---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      + + + + +   +  R      K +++AD +R +L   G  + D
Sbjct: 404 GAGSDSADTARVTEALDVLVRAELDRRAEARAAKDWATADAVRDRLTEAGIEVTD 458


>gi|167756028|ref|ZP_02428155.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
 gi|237734013|ref|ZP_04564494.1| cysteinyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167704020|gb|EDS18599.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
 gi|229382839|gb|EEO32930.1| cysteinyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 449

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 167/471 (35%), Positives = 242/471 (51%), Gaps = 52/471 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  +KI+NTL  K  EF+ +    + +YVCGPTVY++ HIGN RPMIVFDVL R    Y
Sbjct: 1   MEVMMKIFNTLTNKKEEFKPLREGEVSIYVCGPTVYNYVHIGNTRPMIVFDVLRRTFE-Y 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV---KDTTR-LAC 116
            G K VT+V N TD+DDKII+ A+ E           I   + T +++   +D  R L  
Sbjct: 60  LGYK-VTFVSNFTDVDDKIIKAAKAE----------GITEKELTDKYIAAYEDVRRNLNL 108

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L PT+ PR TN +  +I  I N++  G+AYE + ++ F  S I  YG  S  KI++   G
Sbjct: 109 LFPTYAPRVTNTMDAIIKFIDNLVKSGYAYEVDGDVYFRVSKIDEYGQLSGIKIEDLVAG 168

Query: 177 T--RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH-YLGKVFDI 233
              R+ E   K+   DF LWK+ T     ++SPW +GRPGWH EC  M +  + G   DI
Sbjct: 169 ASERIDENDKKEESTDFALWKK-TDEGIRFDSPWSKGRPGWHTECVVMINDIFEGGKIDI 227

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG DL FPHHENEIAQS         A+ W+HN  +N++ +KMSKS GN I   +++ 
Sbjct: 228 HGGGQDLKFPHHENEIAQSMACHH-HPIAHTWMHNQMINIDNQKMSKSLGNVIWAKDMV- 285

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------- 343
                       V++  ML +HYR P++ T + L   +  ++K      S          
Sbjct: 286 ------AELGCNVVKWFMLSSHYRNPLNLTEEVLNSVKKEVAKVDNVIKSVSLYLQVNHI 339

Query: 344 ------KGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAH 390
                 K  +D  ++ AL +DLNT  A       ++ L+   R+  KN   + I   +  
Sbjct: 340 ANENYNKAAVD-GMVGALEDDLNTSLALTKILDQVKKLNLAFRQKEKNDKAIAIEYQTLL 398

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            +   +      + ++ A  ++ Q  L   + K F +AD +R QL  KG I
Sbjct: 399 KMTAVIGFVFEPRKLNAAELEIYQAWLEAKQNKDFETADKLRTQLIEKGII 449


>gi|189502029|ref|YP_001957746.1| hypothetical protein Aasi_0619 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497470|gb|ACE06017.1| hypothetical protein Aasi_0619 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 495

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 154/410 (37%), Positives = 217/410 (52%), Gaps = 46/410 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YN+L R+   F   +P  + MYVCGPTVY  AH+G+AR  + FDV+ R L + 
Sbjct: 1   MHNSLQVYNSLTRQQETFTPTNPPYVGMYVCGPTVYGPAHLGHARCYVTFDVIQRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----------DKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+           DKI ++A  E+   P+      +  +    F +D
Sbjct: 61  GYQ--VRYVRNITDVGHLERDADEGADKIAKQASLENVE-PME-----VVQRYMNSFHRD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L    P  +P+A+ HIP+ I +IQ I+  G AYE N  + F+  +     +YG  S 
Sbjct: 113 MALLNVQPPNIEPQASGHIPEQIRMIQEIMNQGLAYEVNGSVYFNIMAYREKYHYGKLSG 172

Query: 168 RKIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R ID+   GTRV   +  KK P DF LWK++       W SPWG G PGWHIEC+A+++ 
Sbjct: 173 RNIDDLLAGTRVLAGQQEKKFPLDFALWKKANNTHIMRWPSPWGEGFPGWHIECTALATK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE E+AQS  A      A  W+HN  + +  +KMSKS GN 
Sbjct: 233 YLGSCFDIHGGGMDLLFPHHECELAQSQAAQHT-TLAKYWLHNNLVTINDQKMSKSLGNS 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQT 340
           IT++EL +       R++   V+R  +L  HYR  + FT + L  AE     L++    T
Sbjct: 292 ITLDELFQGIHPLLDRAYSPMVLRFFILQAHYRSTLSFTNEALQAAEKGYLKLINGLKTT 351

Query: 341 STSK------GIIDPAVLS-----------ALYNDLNTVSAIQALHKLAR 373
              K      G +D A+++           A+ ND NT   I  L  L +
Sbjct: 352 KDMKYAPIGLGNVDEAMVAQVEKHMAACYQAMNNDFNTAKLIAELFHLLK 401


>gi|319948867|ref|ZP_08022980.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437469|gb|EFV92476.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 478

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 244/494 (49%), Gaps = 67/494 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           + +Y+T  R + EF  +   +  +Y+CG T     HIG+ R  + FD+L R LL   Y  
Sbjct: 3   LHLYDTATRSLREFTPVREGHASVYLCGATPQAVPHIGHVRSGVAFDILRRWLLSTGYD- 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN+TDIDDKI+ +A +     P  +      + + ++F +    L  L P+ +P
Sbjct: 62  --VAFVRNVTDIDDKILTKAAEN--GRPWWE----WAATHEREFTRAYDALGVLPPSTEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIP--NYGSFSRRKIDEQKMGTR 178
           RAT H+ QMI  ++ +I  G+AY A   + FD    S+ P  +YG  S  ++DE   G  
Sbjct: 114 RATGHMTQMIEYMERLIERGYAYPAEGSVYFDVAAWSAAPEGDYGHLSGHRLDEVDQG-E 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +   K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIHGGGL
Sbjct: 173 AADLRGKRDPRDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATWYLGGTFDIHGGGL 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A   +  A  W+HNG++ + G KMSKS GN +++  +L   +  
Sbjct: 233 DLQFPHHENEAAQSHAAG--DGFARYWLHNGWVTMAGEKMSKSLGNVLSVPNILTAVR-- 288

Query: 299 GRSWPAPV-IRLAMLMTHYREPIDFT-----------------VQRLTEAEILLSKWPQT 340
                 PV +R  +   HYR  ++++                 VQR+ EA +     P  
Sbjct: 289 ------PVELRYYLGSAHYRSMLEYSPEALQEAAAAYRRIEAFVQRVDEA-VRSGATPDA 341

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARE---STKNHDLLPIFNASAH------I 391
               G    A  +A+ +DL   +A+  +H   R    +    D      A++       +
Sbjct: 342 EVPVGEWTEAFAAAMDDDLGVPAALAEIHGRVRAGNTALSAGDTEAALTAASSVRAMTAV 401

Query: 392 LGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           LG++                   + + +   ++ R      K F++AD IR +L + G  
Sbjct: 402 LGVDPLDPQWASAAGGDDAALTALDLLVRAELEARAQARADKDFATADAIRDRLVAAGIE 461

Query: 442 LEDYKNPDNGQRMT 455
           + D     +GQ+ +
Sbjct: 462 VADTA---DGQKWS 472


>gi|32473247|ref|NP_866241.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32397926|emb|CAD73927.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 628

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 152/426 (35%), Positives = 212/426 (49%), Gaps = 60/426 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL +    F  +    + MY+CGPTVY  +HIG+    ++FD + R L Y   E 
Sbjct: 111 IRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSGYE- 169

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITD+DDK+I ++++    IP+    S I  + T  ++ +   L      H PR
Sbjct: 170 -VTWVVNITDVDDKLIGKSKER--GIPM----SQIAVEMTADYLANLRELGVNQIDHLPR 222

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+PQ+I  I ++   G AY  + ++ FD +  P YG  S R +++Q+ G        
Sbjct: 223 ATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVEDQQ-GEGGGAAAK 281

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+FPH
Sbjct: 282 KRNPGDFALWKSARPGEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLMFPH 341

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSN----------GNFITINELL 292
           HENE AQS C          W+HNG +    +G+   KS+                 ++ 
Sbjct: 342 HENERAQSTCC-HGAPMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASGKIS 400

Query: 293 ETKKFGG-----RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------- 337
            +K  GG     RS     IR  +L T YR  I +  + L EA   L  +          
Sbjct: 401 RSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRFAEI 460

Query: 338 ---------PQTSTSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLARE 374
                      T  + G  DPA               L+A+ +D NT +AI  L    R 
Sbjct: 461 TGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDALRT 520

Query: 375 STKNHD 380
             ++ D
Sbjct: 521 LNRHID 526


>gi|213963733|ref|ZP_03391983.1| cysteinyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953613|gb|EEB64945.1| cysteinyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 490

 Score =  250 bits (639), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 168/491 (34%), Positives = 249/491 (50%), Gaps = 54/491 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MNHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRTLKFL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +D+ ++++R E    P+      I  K T  F K 
Sbjct: 61  -GYK-VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFS 166
                 L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  S
Sbjct: 113 LEIFNLLPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELS 172

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           RR I+E    TR +  +  K NP DF LWK+++P     W SPWG G PGWH+EC+ MS+
Sbjct: 173 RRNIEELFANTRDLDGQGEKHNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMST 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL FPHHE EIAQ   A   E     W+H   L + G++MSKS GN
Sbjct: 233 KYLGNQFDIHGGGMDLKFPHHECEIAQG-KAGHGESPVRYWMHANMLTMNGQRMSKSTGN 291

Query: 285 FITINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--- 340
           +I   +L+  +  F  + +   VIR   +  HYR  +D + + +  AE   S+  +    
Sbjct: 292 YILPMQLISGENSFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFSRLMEAVKT 351

Query: 341 --STSKGIIDPAVLS------------ALYNDLNTVSAIQALHKLARESTKN-------- 378
               S  +  P  LS            AL +D N+   I  L ++ +    +        
Sbjct: 352 LNEMSTDLEHPGPLSYEIDQWKQKCYDALLDDFNSPILIAHLFEMVKWINSDEKISVDEL 411

Query: 379 HDLLPIFNASAH-ILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           ++L  + NA    +LG++  ++ +N N  +   ++ L+  R+     K ++ +D IR +L
Sbjct: 412 NELKTLMNAFVFDVLGLQSEQQTVNNNDKLDGVLQLLINMRMEARANKDWALSDKIRDEL 471

Query: 436 ESKGFILEDYK 446
            + G  L+D K
Sbjct: 472 LAMGIQLKDGK 482


>gi|327540430|gb|EGF27015.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 539

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 173/539 (32%), Positives = 249/539 (46%), Gaps = 105/539 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL +    F  +    + MY+CGPTVY  +HIG+    ++FD + R L Y   E 
Sbjct: 22  IRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSGYE- 80

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITD+DDK+I ++++    IP+    S I  + T  ++ +   L      H PR
Sbjct: 81  -VTWVVNITDVDDKLIGKSKER--GIPM----SQIAVEMTADYLANLRELGVNQIDHLPR 133

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+PQ+I  I ++   G AY  + ++ FD +  P YG  S R +++Q+ G        
Sbjct: 134 ATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVEDQQ-GEGGGAAAK 192

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+FPH
Sbjct: 193 KRNPGDFALWKSARPDEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLMFPH 252

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSN----------GNFITINELL 292
           HENE AQS C          W+HNG +    +G+   KS+                 ++ 
Sbjct: 253 HENERAQSTCC-HGAPMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASGKIS 311

Query: 293 ETKKFGG-----RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------- 337
            +K  GG     RS     IR  +L T YR  I +  + L EA   L  +          
Sbjct: 312 RSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRFAEI 371

Query: 338 ---------PQTSTSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLARE 374
                      T  + G  DPA               L+A+ +D NT +AI  L    R 
Sbjct: 372 TGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDALRT 431

Query: 375 STKNHDLLPIFNAS--------------------AHILGI-----------EVCKEHLNK 403
             ++ D   +   +                    + +LG+           E   E L+ 
Sbjct: 432 LNRHIDANQLVAGADAKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEADAELLDS 491

Query: 404 --NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             ++ I + K  +ER      K +++ D IR +L   G  L D K        T W++K
Sbjct: 492 VVHLLINLRKEARER------KDYATGDAIRDRLADLGVALLDKKEG------TSWERK 538


>gi|120437076|ref|YP_862762.1| cysteinyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|187629825|sp|A0M500|SYC_GRAFK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117579226|emb|CAL67695.1| cysteinyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 494

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 164/490 (33%), Positives = 252/490 (51%), Gaps = 54/490 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +K+YN++  +   F  I+  N+ MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   EQSLKLYNSMSGEKETFTPINEGNVGMYVCGPTVYSNVHLGNCRTFMSFDLVFRYLKHL- 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD           +D+I ++AR E    P+      +  K T  F    
Sbjct: 65  GYK-VRYVRNITDAGHLENDADSGEDRIAKKARLEQIE-PME-----VVQKYTVDFHNIL 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRR 168
            +     P+ +P AT HI + I +I+ I+ +G AYEAN  + FD        +YG  S R
Sbjct: 118 NKFNNYPPSIEPTATGHIVEQIEIIKTILDNGFAYEANGSVYFDVVKFNKEHSYGKLSGR 177

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            I++    TR +  +  K++P DF LWK++ P     W SPW  G PGWH+EC+ MS+ Y
Sbjct: 178 AIEDMIANTRELSAQSDKRSPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DL FPHHE EIAQ   A   +   N W+H   L L G+KM+KS GNFI
Sbjct: 238 LGEEFDIHGGGMDLKFPHHECEIAQGEAATG-KSPVNYWLHANMLTLNGKKMAKSTGNFI 296

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA----- 330
              ++     +   +++   V+R  +L  HYR  +DF+            RL +A     
Sbjct: 297 LPEQIFTGNNEVLTKAFSPNVVRFFVLQAHYRSILDFSSDALLGSEKGFNRLMDAYRSIE 356

Query: 331 --------EILLSKWPQT---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                   +  LS+W Q+   + +     P +++ L++ + T++ I+       ++ K  
Sbjct: 357 ELPASDKSDFNLSEWKQSCYDAMNDDFNSPILIAKLFDAVKTINGIKDGSIQITDTDKEE 416

Query: 380 DLLPIFNASAHILG-IEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLE 436
               +      ILG I+   E+ N+   +A  IE L++ R      K F+ +D IR +L+
Sbjct: 417 FKATMSAFMFDILGLIDAASENKNEGDKLAGTIELLIKLRADARNNKDFALSDQIRDRLQ 476

Query: 437 SKGFILEDYK 446
             G  L+D K
Sbjct: 477 EIGIQLKDGK 486


>gi|256842437|ref|ZP_05547940.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256736044|gb|EEU49375.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 491

 Score =  250 bits (638), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 256/493 (51%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +          +++ A  IR  +L  HYR  +DF+ + L  AE  LS+  +     
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351

Query: 340 -------TST--SKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLL 382
                  TST  +KG+ +     A+ +DLN+   I  L    R        ++T + + L
Sbjct: 352 MKLQPSATSTVDTKGLREK-CFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDL 410

Query: 383 PIFNASAH-----ILGI--EVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H     ILG+  E      N +  S A++ L+  R      K ++++D IR +
Sbjct: 411 KELQEVFHLFLFDILGMKDEASASGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTAMGFEIKDTKD 483


>gi|289178054|gb|ADC85300.1| Cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 559

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 168/520 (32%), Positives = 249/520 (47%), Gaps = 97/520 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T    ++ F+ I P  + MYVCG TV    HIG+ R  + FD++ R      G K
Sbjct: 44  LKLYDTATHAVSRFEPIKPGEVGMYVCGATVQSAPHIGHIRAAVAFDIIRRWFERL-GYK 102

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKI+++A          +          ++F      L  LAPT++PR
Sbjct: 103 -VTFIRNVTDIDDKILDKA------AAAGEDWWARAYHYEREFTHAYNELGVLAPTYEPR 155

Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK-------- 169
           AT HI  M++LI+ II +GHAY       E   ++ FD +S P+YG  + +K        
Sbjct: 156 ATGHIIDMVHLIERIIDNGHAYVIRDEHGELTGDVYFDVASWPHYGELTHQKQTAEVDEA 215

Query: 170 -IDEQKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGRG 211
                +MG  V     +KY+          K++P DF LWKR   + P +  W++P+G G
Sbjct: 216 AAVADRMGPSVDASGDDKYNPADPADLSENKRDPRDFALWKRPKSTDPADARWKTPFGTG 275

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A    +TAN W+H+ ++
Sbjct: 276 RPGWHIECSAMSYRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGY--RTANRWMHSAWV 333

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L EAE
Sbjct: 334 TAKGEKMSKSLGNGLSVPVVLAEHS----AW---VVRYALGSVQYRSMLEWSDQTLAEAE 386

Query: 332 I--------------LLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
                           L + P     T  S   +    ++A+ +D+N   A  A+    R
Sbjct: 387 AAYERIMNFIGHAADALGEQPSRDEITGVSADNLPVDFVAAMNDDVNVSRATAAIFTQIR 446

Query: 374 ES-------TKNHDLLPIFNASAHILGIEVCKEHLN----------------------KN 404
           E          N D        A ++ +    + L                       K 
Sbjct: 447 EGNTLLARLAGNADDADRTALRAALVNVRAMLDTLGLDPLASPWIDGGDEAGGDSSALKT 506

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   ++  +  R    K K F+ AD IR  L + G  +ED
Sbjct: 507 LGELVDAQLAARAEARKNKDFAKADQIRDALAAAGITIED 546


>gi|313228816|emb|CBY17967.1| unnamed protein product [Oikopleura dioica]
          Length = 636

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 153/447 (34%), Positives = 225/447 (50%), Gaps = 54/447 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+K+ N+L R   EF+  D   ++ Y CGPTVYD +H+G+AR  + FD++ R+LR Y+G 
Sbjct: 20  KLKVNNSLTRSKDEFRTADGKTVKWYSCGPTVYDHSHMGHARSYVSFDIIRRILRDYFGY 79

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y  NITDIDDKII+R+     ++  N     +     +++ +D   L    P    
Sbjct: 80  D-VFYQINITDIDDKIIKRS-----TVTDNSIFDALPRYWEKKYFEDMQALNIEDPDCLT 133

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIF-----DTSSIPNYG-----SFSRRKIDEQ 173
           R + ++P+++  ++ II HG+AYE+N  + F     D+SS   Y      +   R+   +
Sbjct: 134 RVSEYVPEIVTFVEKIIEHGYAYESNGSVYFKVDHFDSSSNHYYAKLVPEAVGNREALAE 193

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
             G+       K++ +DF LWK S P EP W+SPWG+GRPGWHIECS M+S  +GK  DI
Sbjct: 194 GEGSLAAAASEKRSESDFALWKNSKPGEPSWDSPWGKGRPGWHIECSVMASDIMGKTMDI 253

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DL FPHH+NE+AQS      +     ++H G L + G KMSKS  NFITI E L 
Sbjct: 254 HSGGVDLKFPHHDNELAQSEAYHANDNWVQYFLHTGHLTIAGCKMSKSLKNFITIKEAL- 312

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---------------------EI 332
            KK   R      IRL+ L+  + + +D++   L +A                     + 
Sbjct: 313 -KKNSARQ-----IRLSFLLHAWDKTLDYSDNTLADAVQYEKAISEFFANIKAALLNDDG 366

Query: 333 LLSKW--PQTSTSKGIIDPA--VLSALYNDLNTVSAIQALHKLARESTK------NHDLL 382
           +L KW  P+       +     V   L ++LNT  A  AL  +   + K      N D  
Sbjct: 367 ILKKWGAPEKDLHAEFMAAQNDVHDKLCDNLNTAGACLALKDIVSATNKYLAKQENPDFK 426

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAI 409
            + N   ++  I  C   LN    I  
Sbjct: 427 LLRNVGTYVTKIMKCFGCLNSEDQIGF 453


>gi|145330001|ref|NP_001077986.1| SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA
           ligase/ nucleotide binding [Arabidopsis thaliana]
 gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 401

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 146/386 (37%), Positives = 203/386 (52%), Gaps = 64/386 (16%)

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
           +L CL P+ QPR ++HIPQ+I LI+ I+ +G+AY+ + +I F     P YG  S RK+++
Sbjct: 3   QLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLED 62

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            + G RV     KK+PADF LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  FD
Sbjct: 63  NRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFD 122

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANI--WIHNGFLNLEGRKMSKSNGNFITINE 290
           IHGGG+DL+FPHHENEIAQSC A     ++NI  WIHNGF+ ++  KMSKS GNF TI +
Sbjct: 123 IHGGGMDLVFPHHENEIAQSCAAC---DSSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQ 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSK 336
           +++        +    +RL ++ THYR PI+++               Q L + E  L +
Sbjct: 180 VIDL-------YHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGE 232

Query: 337 WPQT-----------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
              T                       S S  ++ P  L+A+   L T++ +    K  +
Sbjct: 233 KDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKK 292

Query: 374 ESTKNHDLLPIFNASAHILGI------------EVCKEHLNKNISIAIEKL---VQERLI 418
           ++ +   L  +      +L I            E  KE   K   +  E +   VQER  
Sbjct: 293 QARREESLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTD 352

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
             K K++  +D IRK L   G  L D
Sbjct: 353 ARKNKEYERSDAIRKDLAKVGIALMD 378


>gi|84498461|ref|ZP_00997231.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381204|gb|EAP97088.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 465

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 159/466 (34%), Positives = 237/466 (50%), Gaps = 56/466 (12%)

Query: 17  EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
           +F  + P  + +Y+CG T     HIG+ R  + FDVL R L   +G   V  VRN+TD+D
Sbjct: 3   DFVPLQPGRVGIYICGLTTQAPPHIGHVRFAVAFDVLRRWLVRGHGLD-VALVRNVTDLD 61

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           DKI+ ++ +        +    ++ +N     +  T L  L PT++PRA  HI +M+ LI
Sbjct: 62  DKILRKSAES------GEDWFALSYRNEVATSEALTLLGVLPPTYEPRAMGHITEMVELI 115

Query: 137 QNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
           + +I +GHAY A +   ++ FD  S P YG  + +KID+         +  K++P DF L
Sbjct: 116 EVLIANGHAYAAEDGSGDVYFDVRSWPAYGEVTNQKIDDMAAAEDADPR-GKRDPRDFAL 174

Query: 194 WKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           WK     EP    W +PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DL FPHHENE A
Sbjct: 175 WKGRKDGEPETASWPTPWGRGRPGWHLECSAMARKYLGDAFDIHGGGVDLRFPHHENEQA 234

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV-IRL 309
           QS  A      A++W+HN ++ + G KMSKS GN + I+E+ +  +        P+ +R 
Sbjct: 235 QSRAAGL--PFASLWMHNAWVTISGEKMSKSLGNSLLIHEVTKKAR--------PLAVRY 284

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSK---------WPQ---TSTSKGIIDPAVLSALYN 357
            +   HYR  I+F    L EAE  + +          P    T T    +    + A+ +
Sbjct: 285 YLTAAHYRSMIEFHEGSLAEAEAAVDRIEGFLRRALGPDSAVTPTGDEKLPVEFVEAMDD 344

Query: 358 DLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIE------VCKEHLN 402
           DL    A+ A+H             E+    +L  +  A   ILG+          ++ +
Sbjct: 345 DLGVSGALAAIHDTVTQGNTALDDGENDTARELAALVIAMTDILGVNPLDPAWAGADNSS 404

Query: 403 KNISIAIEKLVQERLI----LLKMKKFSSADYIRKQLESKGFILED 444
            +   A++ LV ERL         + ++++D IR QL S G  +ED
Sbjct: 405 SDAQSALDALVSERLAARTSARSARDYATSDAIRDQLISAGITIED 450


>gi|327312789|ref|YP_004328226.1| cysteine--tRNA ligase [Prevotella denticola F0289]
 gi|326946352|gb|AEA22237.1| cysteine--tRNA ligase [Prevotella denticola F0289]
          Length = 495

 Score =  249 bits (637), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 181/504 (35%), Positives = 253/504 (50%), Gaps = 77/504 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   ++ MYVCGPTVY   H+G+ARP I FD+L+R LR+  G
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGRN 173

Query: 170 IDEQKMGTR----VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           + +    +R    V EK+   N ADF LWKR+ P     W SPW  G PGWH EC+AM  
Sbjct: 174 LTDMINNSRELAGVGEKH---NQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGR 230

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GN
Sbjct: 231 KYLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGN 289

Query: 285 FITINELLETKKFGGRS------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----- 333
           FIT+ +      F GR       +    IR  +L  HYR  +DF+ + L  AE       
Sbjct: 290 FITLEQF-----FTGRHETLMQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLM 344

Query: 334 -----LSKWPQTSTSKG--------------------IIDPAVLSALYNDLNTVSAIQAL 368
                L++   ++ S G                    ++ PAV+S L+   + V+ I   
Sbjct: 345 NGIEDLARIQASAASDGNTGKFVSAFRKKCYEAMNDDLMTPAVISELFEACHLVN-ILID 403

Query: 369 HKLARESTKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKM----K 423
           HK    +    +L    +  A  ILG++  +   N     A  K+V   L L       K
Sbjct: 404 HKAQISADDLKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEK 463

Query: 424 KFSSADYIRKQLESKGFILEDYKN 447
            ++ +D IR  L + GF ++D K+
Sbjct: 464 NWAVSDQIRDALSAAGFQVKDTKD 487


>gi|301308608|ref|ZP_07214561.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833402|gb|EFK64019.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 491

 Score =  249 bits (636), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 172/493 (34%), Positives = 256/493 (51%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +          +++ A  IR  +L  HYR  +DF+ + L  AE  LS+  +     
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351

Query: 340 -------TST--SKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLL 382
                  TST  +KG+ +     A+ +DLN+   I  L   AR        ++T + + L
Sbjct: 352 MKLQPSATSTVDTKGLREK-CFEAMNDDLNSPIVISHLFDAARAINSVKDGKATLSEEDL 410

Query: 383 PIFNASAH-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H     ILG++       +  +    A++ L+  R      K ++++D IR +
Sbjct: 411 KELQEVFHLFLFDILGMKDEASAGGNSYETFGKAVDLLLSIRQQAKANKDWATSDKIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTAMGFEIKDTKD 483


>gi|255322247|ref|ZP_05363393.1| cysteinyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300620|gb|EET79891.1| cysteinyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 462

 Score =  249 bits (636), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 164/472 (34%), Positives = 243/472 (51%), Gaps = 52/472 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+++++RK  EF+ +    +R+YVCGPTVYD AH+G+A+  I FD+L R L    G K
Sbjct: 1   MQIFDSVKRKKVEFEPVKSDFVRIYVCGPTVYDDAHLGHAKSAISFDLLRRTLS-ELGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TDIDDKI+++  +   S+        IT +    + +D + L  L P  +P+
Sbjct: 60  -VKFVRNYTDIDDKILKKMSESGESLE------AITDRYIASYERDMSALNVLEPDVKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + +MI  I+ ++ +G AYE A++ I FDT+    Y S S  K D +    RV    
Sbjct: 113 ATQTLKEMIGYIEILLKNGFAYEIADDGIYFDTAKDAEYLSLS-GKFDTEANVARVESNL 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVF--DIHGGGLD 239
            K++  DF+LWK     E  +ESP+GRGRPGWH EC AM   +L  G+ F  DIH GGLD
Sbjct: 172 QKEDKKDFVLWKFD---EKWYESPFGRGRPGWHTECVAMIKKHLSSGEKFEIDIHAGGLD 228

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ  CA+  +  A  W+HNGF+ +   KMSKS GN   + + LE +  G 
Sbjct: 229 LLFPHHENEAAQCRCAEH-KNLAKYWLHNGFIQVNNEKMSKSLGNSFFVKDALE-RNLG- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDP 349
                  +R  ++ +HYR   +F+   L  A+  L K               ++      
Sbjct: 286 -----EAVRFYLISSHYRANFNFSEDDLNAAKKRLDKIYRLKKRVLGAAANLSANDKFKS 340

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-----------AHILGI---- 394
             +SA+ +DLNT  A+ ++ +  R +    D  P   A            A +LGI    
Sbjct: 341 DFMSAMGDDLNTSKALASVDEFVRSANDELDANPKDKAKKSEIAANLELIARVLGILQVD 400

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E  +  ++      IE L+ +R      K +  +D IR  L + G  L D
Sbjct: 401 VFEYFQFGVSDEKRAYIEDLINQRNEAKAAKNYELSDKIRDMLAANGISLMD 452


>gi|183601840|ref|ZP_02963209.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219682755|ref|YP_002469138.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190331|ref|YP_002967725.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195737|ref|YP_002969292.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218725|gb|EDT89367.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620405|gb|ACL28562.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240248723|gb|ACS45663.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250291|gb|ACS47230.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793318|gb|ADG32853.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 545

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 168/520 (32%), Positives = 249/520 (47%), Gaps = 97/520 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T    ++ F+ I P  + MYVCG TV    HIG+ R  + FD++ R      G K
Sbjct: 30  LKLYDTATHAVSRFEPIKPGEVGMYVCGATVQSAPHIGHIRAAVAFDIIRRWFERL-GYK 88

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKI+++A          +          ++F      L  LAPT++PR
Sbjct: 89  -VTFIRNVTDIDDKILDKA------AAAGEDWWARAYHYEREFTHAYNELGVLAPTYEPR 141

Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK-------- 169
           AT HI  M++LI+ II +GHAY       E   ++ FD +S P+YG  + +K        
Sbjct: 142 ATGHIIDMVHLIERIIDNGHAYVIRDEHGELTGDVYFDVASWPHYGELTHQKQTAEVDEA 201

Query: 170 -IDEQKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGRG 211
                +MG  V     +KY+          K++P DF LWKR   + P +  W++P+G G
Sbjct: 202 AAVADRMGPSVDASGDDKYNPADPADLSENKRDPRDFALWKRPKSTDPADARWKTPFGTG 261

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A    +TAN W+H+ ++
Sbjct: 262 RPGWHIECSAMSYRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGY--RTANRWMHSAWV 319

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L EAE
Sbjct: 320 TAKGEKMSKSLGNGLSVPVVLAEHS----AW---VVRYALGSVQYRSMLEWSDQTLAEAE 372

Query: 332 I--------------LLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
                           L + P     T  S   +    ++A+ +D+N   A  A+    R
Sbjct: 373 AAYERIMNFIGHAADALGEQPSRDEITGVSADNLPVDFVAAMNDDVNVSRATAAIFTQIR 432

Query: 374 ES-------TKNHDLLPIFNASAHILGIEVCKEHLN----------------------KN 404
           E          N D        A ++ +    + L                       K 
Sbjct: 433 EGNTLLARLAGNADDADRTALRAALVNVRAMLDTLGLDPLASPWIDGGDEAGGDSSALKT 492

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   ++  +  R    K K F+ AD IR  L + G  +ED
Sbjct: 493 LGELVDAQLAARAEARKNKDFAKADQIRDALAAAGITIED 532


>gi|225468795|ref|XP_002262997.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 435

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 146/405 (36%), Positives = 209/405 (51%), Gaps = 67/405 (16%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           ++S+  Q+++ D T L CL+PTHQPR ++H+ Q+  +I  II +  AY  + ++ F    
Sbjct: 15  LSSRFCQEYLDDMTDLHCLSPTHQPRVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDK 74

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
            PNYG  S RK++  + G RV     K+NPADF LWK + P EP W+SPWG GRPGWHIE
Sbjct: 75  SPNYGRLSGRKLENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIE 134

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           CSAMS+HYL   FDIHGGG+DLIFPHHENEIAQSC A + E   + W+HNG +     KM
Sbjct: 135 CSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQSCAACQ-ESNVSYWMHNGHVTNNNEKM 193

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV-------------- 324
           SKS GNF TI ++ +        +    +R  +L THYR P+++++              
Sbjct: 194 SKSLGNFFTIRQITDL-------YHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIY 246

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAV-----------LSALYNDLNT------------ 361
           Q L + E  LS + + +     I PA             + + +DL+T            
Sbjct: 247 QTLRDCEDTLSLFQEVNGRNVCITPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEAL 306

Query: 362 -------------------VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                              +SA+++L +L +E      +L + +  A+   ++  K    
Sbjct: 307 RFINSCLNMLKKKQQKQQQLSAVESLTELGKEVKGVLSVLGLLSTLAYSEVLQQLKGKAL 366

Query: 403 KN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K    I   +  L++ER +  K K FS  D IR  L SKG  L D
Sbjct: 367 KRAGMIEDDVLHLIEERALARKNKDFSKGDQIRADLASKGIALMD 411


>gi|206900189|ref|YP_002251400.1| cysteinyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|226735053|sp|B5YAD0|SYC_DICT6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206739292|gb|ACI18350.1| cysteinyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 465

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 167/465 (35%), Positives = 241/465 (51%), Gaps = 46/465 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL ++  +F+ ++P  + MY CGPTVY++AHIGN R  I  D+L R+L   Y    V
Sbjct: 5   LYNTLTKRKEKFEPLNPPYVGMYTCGPTVYNYAHIGNLRTYIFEDILKRVL--IYNGYIV 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +V NITD+          +DKI   A++E  S         I    T+ F +D  +L  
Sbjct: 63  KHVMNITDVGHLTSDADEGEDKIEREAKKERRSA------WEIAEFYTEAFKRDLKKLNI 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L P    +AT+HI   I LI  +   G+ Y  ++ I FDTS +P+YG  + + ++    G
Sbjct: 117 LEPDIWCKATDHIQDFIDLILILERKGYTYRTSDGIYFDTSKVPDYGKLAGQDLENLLPG 176

Query: 177 TRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            RV     KKNP DF LWK   +    +  W+SPWG G PGWHIECSAMS+ YLG+ FDI
Sbjct: 177 ARVEYNPEKKNPTDFALWKFSPKDVKRQMEWDSPWGVGFPGWHIECSAMSTKYLGQPFDI 236

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+D I  HH NEIAQS  A   +  A  W+H  FL +  ++M KS GNFIT+++ LE
Sbjct: 237 HCGGIDHIPIHHTNEIAQSEAA-YDKPMAKYWLHGEFLIMGEKRMGKSEGNFITLSD-LE 294

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTS-KG 345
            K +   S+     R   L  HYR P+ FT   L  A+  L        K+P+       
Sbjct: 295 EKGYHPLSY-----RYFCLTAHYRSPLKFTWSALEAAQRALFRLYENMKKYPKEEAKYDE 349

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-----HILGIEVCKEH 400
             +     A+ +DL+   A+     +  E  K+  L P    +       +LG+ +    
Sbjct: 350 KYEEEFHKAINDDLDMPKALA----ITWELVKDDKLAPEVKRATLLQFDKVLGLSLDNPP 405

Query: 401 LNKNISIAIE-KLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             K        KLV+ER +  K K +  AD IR++++++G+I+ED
Sbjct: 406 EIKIEIPEEIWKLVEERELARKNKDWEKADRIREEIKNRGYIIED 450


>gi|296128532|ref|YP_003635782.1| cysteinyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020347|gb|ADG73583.1| cysteinyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 481

 Score =  249 bits (636), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 187/333 (56%), Gaps = 26/333 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++++T  + + +F  +    + +Y+CG TV    H+G+ R  + FDVL R LR     
Sbjct: 2   SLRLFDTGTQSVRDFVPLVEGEVGVYLCGATVQSPPHVGHVRSAVAFDVLVRWLRRSGAR 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT VRN+TDIDDKI+ +A                  +N + F      L  L P ++P
Sbjct: 62  --VTMVRNVTDIDDKILAKA------AAAGRPWWAWALQNERAFASAYAALGVLPPDYEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT H+P M+ L+  ++  GHAY A   ++ FD  S   YG+ + +++D+    T VPE 
Sbjct: 114 RATGHVPAMLELMDRLVERGHAYAAGPGDVYFDVRSWAEYGALTNQRVDDM---TDVPED 170

Query: 183 YH--KKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K++P DF LWK   P EPG   W++ +GRGRPGWH+ECSAM+  YLG+ FDIHGGG
Sbjct: 171 AGSGKRDPHDFALWKAPKPGEPGTAAWQTRYGRGRPGWHLECSAMAHRYLGESFDIHGGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENE AQS  A      A  W+HNG++   G KMSKS GN + +  +LE    
Sbjct: 231 LDLRFPHHENEQAQSRAAGY--GFARYWLHNGWVTQGGAKMSKSLGNGLLVTTVLEKA-- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
                PA V+R A+    YR  +++T   L EA
Sbjct: 287 -----PAVVVRYALTAVQYRSMLEWTDDTLAEA 314


>gi|212550657|ref|YP_002308974.1| cysteinyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229558615|sp|B6YQU1|SYC_AZOPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212548895|dbj|BAG83563.1| cysteinyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 492

 Score =  249 bits (636), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 173/496 (34%), Positives = 255/496 (51%), Gaps = 61/496 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK ++ IYNTL  +   FQ++ P  + +YVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MKNQLFIYNTLTGRKELFQSLYPKRVGLYVCGPTVYGDPHLGHARPAITFDILFRYLMHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQE--HPSIPINDAISIITSKNTQQFV 108
                V YVRNITD+          +DKI  +AR E   P   +   +++        + 
Sbjct: 61  --NYKVRYVRNITDVGHLTSDSDLGEDKIARKARLEDLEPMEVVQHYLNL--------YH 110

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSF 165
           K    L  L P+ +P A+ HI + I LI+ I+  G+AYE+   + FD        NYG  
Sbjct: 111 KTMDALNVLPPSIEPHASAHIIEQIQLIKEILEKGYAYESKGSVYFDVEKYNKKYNYGKL 170

Query: 166 SRRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMS 223
           S + I +    TR +  +  K+NP DF LWK+++      W SPW  G PGWH+EC+ MS
Sbjct: 171 SGQNIADMLNTTRKLDGQEGKRNPIDFALWKKASSKHIMQWISPWSNGFPGWHLECTTMS 230

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             YLG +FDIHGGG+DLIFPHHE EIAQ   +   E     W+HN  + + G+KM KS+ 
Sbjct: 231 RKYLGNLFDIHGGGMDLIFPHHECEIAQKVASTGYE-GVKYWMHNNMVTVNGQKMGKSSN 289

Query: 284 NFITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----- 337
           NFI + +L   T     +S+    +R  +L +HYR  IDF+ + L  ++  LS+      
Sbjct: 290 NFINLEQLFNGTNPLLIQSYNPMTVRFFILQSHYRNTIDFSNKALQASKKGLSRLLEANN 349

Query: 338 ------PQTSTS----KGIIDPAVLSALYNDLNTVSAI-----------QALHKLAREST 376
                  QT+ S    +G+ + ++  A+ +DLNT   I            AL K  + +T
Sbjct: 350 NIKQLTAQTTNSTVNIEGLRNKSI-EAMNDDLNTPIIISYLFEATRIVNSALAKQTQLTT 408

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYI 431
           ++   L  F        + +  E   KN S      A++ L+Q R+   + K +  AD I
Sbjct: 409 EDIQQLKDFFQLFLFNLLGIKDELKYKNTSYNSFAKAVDLLLQIRVQAKQEKNWIFADKI 468

Query: 432 RKQLESKGFILEDYKN 447
           R +L   GF ++D KN
Sbjct: 469 RDELTVLGFEVKDTKN 484


>gi|325859814|ref|ZP_08172944.1| cysteine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482740|gb|EGC85743.1| cysteine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 495

 Score =  249 bits (635), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 182/504 (36%), Positives = 251/504 (49%), Gaps = 77/504 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   ++ MYVCGPTVY   H+G+ARP I FD+L+R LR+  G
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGRN 173

Query: 170 IDEQKMGTR----VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           + +    +R    V EK+   N ADF LWKR+ P     W SPW  G PGWH EC+AM  
Sbjct: 174 LTDMINNSRELAGVGEKH---NQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGR 230

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GN
Sbjct: 231 KYLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGN 289

Query: 285 FITINELLETKKFGGRS------WPAPVIRLAMLMTHYREPIDFTVQRLTEAE------- 331
           FIT+ +      F GR       +    IR  +L  HYR  +DF+ + L  AE       
Sbjct: 290 FITLEQF-----FTGRHETLTQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLM 344

Query: 332 --------ILLSKWPQTSTSK---------------GIIDPAVLSALYNDLNTVSAIQAL 368
                   I  S     +T K                ++ PAV+S L+   + V+ I   
Sbjct: 345 NGIEDLACIQASAASDGNTGKFVSAFRQKCYEAMNDDLMTPAVISELFEACHLVN-ILID 403

Query: 369 HKLARESTKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKM----K 423
           HK    +    +L    +  A  ILG++  +   N     A  K+V   L L       K
Sbjct: 404 HKAQISADDLKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEK 463

Query: 424 KFSSADYIRKQLESKGFILEDYKN 447
            ++ +D IR  L + GF ++D K+
Sbjct: 464 NWAVSDQIRDALSAAGFQVKDTKD 487


>gi|291519016|emb|CBK74237.1| cysteinyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 475

 Score =  249 bits (635), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 164/480 (34%), Positives = 239/480 (49%), Gaps = 51/480 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK   K YNT  R++  F+  +   + MY CGPTVY FAHIGN R  I+ D L + L Y 
Sbjct: 1   MKMDFKFYNTATRQVEVFKPNEEGKVSMYTCGPTVYHFAHIGNIRTYIMQDALIKSLEY- 59

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
                V  V NITD+          +DK++  A++EH ++        I    T  F KD
Sbjct: 60  -AGYQVKRVMNITDVGHLSSDADTGEDKMVAGAKREHKTVME------IAKFYTDAFFKD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              +    P     ATN IP+ I++++ ++  G+AY A   + FDTS + +Y  FS    
Sbjct: 113 FDAVGNKRPDVVEPATNCIPEFIHMVEVLLEKGYAYVAGGNVYFDTSKLSDYYVFSSSVE 172

Query: 171 DEQ-KMGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
            E  ++G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S 
Sbjct: 173 KEALEVGVRDDVEEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISM 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +LG+  DIH GG+D IFPHH NE+AQS  A    K  N W H+  LN +  KMSKS G 
Sbjct: 233 KHLGEYMDIHCGGVDNIFPHHTNEVAQS-EAYLGHKWCNYWFHSNHLNDQSGKMSKSKGA 291

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
            +T++ L E      + +   V R   L +HYR+P+ F+   L       +K  +  +  
Sbjct: 292 ILTVSVLQE------KGYDPLVYRFFCLQSHYRKPLVFSWDNLDNTVTAYNKLVKRVSEL 345

Query: 343 -SKGIIDPAVLS--------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
            ++G +D AV S        A+ NDLNT  AI  L+   +  T +   L +  +   +L 
Sbjct: 346 KAEGAVDEAVKSEFEEKFCEAVSNDLNTSMAITILYDALKADTSDATKLALVESFDKVLS 405

Query: 394 IEV---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +++             ++  +   I   +  R    K K F++AD IR +L +KG  ++D
Sbjct: 406 LDLIGHAKALGEAGSSVDAELEAYINDAIARRAEAKKAKDFATADAIRDELLAKGVEIKD 465


>gi|167750381|ref|ZP_02422508.1| hypothetical protein EUBSIR_01355 [Eubacterium siraeum DSM 15702]
 gi|167656741|gb|EDS00871.1| hypothetical protein EUBSIR_01355 [Eubacterium siraeum DSM 15702]
          Length = 472

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 171/478 (35%), Positives = 247/478 (51%), Gaps = 54/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  K  EF       + MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F  D T+L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKYYTDAFFDDCTKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT+ I   I +I ++I  G+AYEA   I FDTS +  Y  F+  K ++  
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIKKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S  +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDDQELKWDSPWGVGYPGWHIECSCISMKHLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS  A    K  N W H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQS-EAYLGHKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQ-TSTS 343
            LLE+K +       PVI R   L++HYR+ + F+ + L  A    E L+++  Q     
Sbjct: 292 -LLESKGYD------PVIYRFFCLLSHYRKSLVFSYENLDNAKGAYEKLVARIAQLLKAE 344

Query: 344 KGIIDPAVL--------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           +G +D A          +A+ ND+NT  AI AL+ + +  T     L +      +L + 
Sbjct: 345 QGEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADTTPATKLALIADFDKVLSLS 404

Query: 396 VCKEHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + ++    N         +   I +L ++R    K K F+ AD +R ++ + G+ +E+
Sbjct: 405 LIEKAKAVNEKPTDTAEELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEE 462


>gi|240146533|ref|ZP_04745134.1| cysteine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201344|gb|EEU99628.1| cysteine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535114|emb|CBL08226.1| cysteinyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291539640|emb|CBL12751.1| cysteinyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 471

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 169/477 (35%), Positives = 245/477 (51%), Gaps = 49/477 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K + YNTL RK+      +   I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENKFQFYNTLTRKVETVIPHEDGKIGMYTCGPTVYHFAHIGNLRSYIMEDVLEKSLRYV 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V  V NITD+          +DK+++ A++EH ++        I    T  F  D
Sbjct: 61  GYD--VKRVMNITDVGHLSSDADTGEDKMLKGAKREHKTV------MEIAKYYTDAFFSD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
             +L    P     ATN IP+ I++I+ ++  G+AY A   + FDTS + +Y  FS +  
Sbjct: 113 CKKLNIKTPDVVEPATNCIPEFIHMIEVLLEKGYAYVAGGNVYFDTSKLDDYYVFSSQSE 172

Query: 171 DEQKMGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSH 225
            E  +G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S  
Sbjct: 173 KELLVGVRDDVEEDVNKKNKNDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGN 284
           +LG+  DIH GG+D IFPHH NEIAQS     +  T    W H   LN +  KMSKS G+
Sbjct: 233 HLGEYVDIHCGGVDNIFPHHTNEIAQS--ESYLGHTWCKYWFHVQHLNDKSGKMSKSKGD 290

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL---TEAEILLSKWPQTS 341
           F+T++ L E      + +   V R+  L +HYR+P++F+ + L     A   L+K     
Sbjct: 291 FLTVSLLQE------KGYDPIVYRMFCLQSHYRKPLEFSYEVLDNMAAAYKKLTKRIAEL 344

Query: 342 TSKGIIDPAVL--------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
             +G +              A+ NDLNT  AI  ++ L ++   +   L + N    +L 
Sbjct: 345 KDEGTVQQDKFDAYKAKFEDAISNDLNTSMAITIIYDLLKDDMNDKTKLALINDFDKVLS 404

Query: 394 IEV------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +       KE ++  +   +   ++ER    K K F+ AD IR +L +KG +L+D
Sbjct: 405 LNLTTAQADAKEEIDAELESYVLAKIEERKEAKKAKDFAKADAIRDELLAKGIVLKD 461


>gi|29840595|ref|NP_829701.1| cysteinyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301685|sp|Q821U7|SYC_CHLCV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29834945|gb|AAP05579.1| cysteinyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 476

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 167/482 (34%), Positives = 251/482 (52%), Gaps = 56/482 (11%)

Query: 2   KKKIKIYNTLERKITEF-QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           K+K+ +YNT+ R    F  + DP  +++Y CGPTVYD+AHIGN R  +  D+L R L ++
Sbjct: 8   KQKLYLYNTVSRAKELFCSSNDP--VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRTLLFF 65

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V ++ NITD+DDK +  A ++      N ++   T+   Q F +D   L  L   
Sbjct: 66  --GYSVRHIMNITDVDDKTLAGACKK------NISLDAYTAPYIQAFFEDVASLNILPAD 117

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             P AT++IPQMI  I  ++  G AY   ++ + F     P YG  S+ K+ + +  +RV
Sbjct: 118 VYPHATHYIPQMIEAIAKLLDEGIAYVGQDSSVYFSIEKFPTYGKLSQLKLQDLQCCSRV 177

Query: 180 P-EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
             ++Y K+N +DF+LWK       G   WESP+G+GRPGWH+ECS M+   LG   DIH 
Sbjct: 178 SSDEYDKENLSDFVLWKAYEEKRDGHIYWESPFGKGRPGWHLECSIMAMELLGASIDIHA 237

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+  
Sbjct: 238 GGVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD-- 294

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-----------SKWPQTS--- 341
               R +    IR  +L +HYR  ++FT + L      L           S +P++S   
Sbjct: 295 ----RGFSGEEIRYMLLQSHYRMQLNFTEEGLLACRQALKRLRDFISRIESVYPESSHIS 350

Query: 342 -----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH------ 390
                  +G +  A   A+ NDLN  +A+ AL     ++    D      A A+      
Sbjct: 351 EDMQQHGEGFLQ-AFSEAIANDLNIAAALAALFDFIHQTNSTIDQANFTQADANYVLDIM 409

Query: 391 -----ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                +LG+      L   I   +++LV+ER +    K +  AD +R Q+ S G+ +ED 
Sbjct: 410 KRINTVLGVIPFSADL--EIPDHVKQLVEEREVARSEKNWKQADALRDQVASLGYSIEDA 467

Query: 446 KN 447
           K+
Sbjct: 468 KS 469


>gi|187735526|ref|YP_001877638.1| cysteinyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425578|gb|ACD04857.1| cysteinyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 471

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 164/480 (34%), Positives = 243/480 (50%), Gaps = 54/480 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R   +   +D   +R Y CGPTVY   HIGN R  ++ DV  R+L    G  
Sbjct: 2   LHLYDTRTRTAQDISPMDGKTLRFYCCGPTVYGPTHIGNFRTFVMQDVFRRVLEL--GGV 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             T++RN+TD+DDK I  +++   S+      +  T+     F +D   L CL P  +P 
Sbjct: 60  PTTHIRNLTDVDDKTIRDSQKAGVSL------AEFTAGWADLFHRDCAALNCLPPHAEPS 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFS---RRKIDEQKMG-TRV 179
           A  HIP+ I ++Q ++  GHAY   +  + F  SS P YG  S    R++D  K   TR 
Sbjct: 114 AVGHIPEQIRMVQTLVEKGHAYVSEDGSVYFRISSFPEYGRLSHLDERELDLGKTANTRS 173

Query: 180 -PEKYHKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             ++Y K + ADF+LWK   P +    W SPWG GRPGWH+ECSAM   Y G  FD+H G
Sbjct: 174 NADEYEKDSVADFVLWKSRRPEDGNNFWPSPWGEGRPGWHLECSAMIHKYFGNDFDLHSG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL+FPHHENE+AQS CA      A +W H   L ++G KMSKS GN  T+ +L    K
Sbjct: 234 GVDLVFPHHENEVAQSRCACG-GGFARLWFHITHLLVDGGKMSKSLGNMYTLADL---DK 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSK---- 344
            G R      +R  +   +YR P++FT+  L +A+  L++  +        + T      
Sbjct: 290 LGHRP---SAVRYVLAGGYYRRPLNFTLSSLEDAKAALNRLSKFDMQLRNASGTDSVPSY 346

Query: 345 ----------GIIDPAVLSALYNDLNTVSAI----QALHKLARESTKNHDLLPIFNASAH 390
                     GI  PA   +L +DLNT  A+     A+ K    S    +   + NA   
Sbjct: 347 EEFCAAFPELGIFQPA-WDSLNDDLNTPEALGHVFSAIRKADIPSLSPEEAARLRNAFHF 405

Query: 391 IL---GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           IL   GI +  E   +     I  L  +R    + + ++ AD +R ++ + G++++D K+
Sbjct: 406 ILAAFGI-ILPEEGQEEAPEEIRTLADQRWQAKQNRDWTEADRLRAEVAALGWVIKDRKD 464


>gi|88803012|ref|ZP_01118539.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88781870|gb|EAR13048.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 492

 Score =  249 bits (635), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 174/491 (35%), Positives = 253/491 (51%), Gaps = 56/491 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++K+YN+L +K  +F+ I    + MYVCGPTVY  AH+GN R  + FD+++R L  + 
Sbjct: 6   ENQLKVYNSLSKKKEDFKPITAGYVGMYVCGPTVYSNAHLGNVRTFMFFDIVFRYL-LHL 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD           +D+I ++AR E    P+      +  + T  F    
Sbjct: 65  GYK-VRYVRNITDAGHLENDADEGEDRIAKKARIEKIE-PME-----VVQRYTVDFHNVL 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
                L P+ +P AT HI + I +I++I+  G AYE N  + FD  +     +YG  S R
Sbjct: 118 KNYNFLPPSIEPTATGHIVEQIEMIKDIVNKGFAYEVNGSVYFDVLAYNKKEHYGILSGR 177

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
           K+++    TR +  +  KKNP DF LWK++       W SPW  G PGWH+ECS MS+ Y
Sbjct: 178 KVEDLVHNTRSLDGQSDKKNPQDFALWKKAEEKHIMRWPSPWSEGFPGWHLECSVMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           LG+ FDIHGGG+DL FPHHE EIAQS  C+ +     N W+H   L L G+KM+KS GNF
Sbjct: 238 LGEQFDIHGGGMDLKFPHHECEIAQSKTCSGKT--PVNYWMHTNMLLLNGQKMAKSTGNF 295

Query: 286 ITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTV----------QRLTEAEILL 334
           I  NE+L  +     +++ A V+R   L  +YR  +DF+            +L EA  +L
Sbjct: 296 ILPNEILTGENDILPKAFSASVVRFFNLQANYRSILDFSGAALEASEKGHSKLMEAVNVL 355

Query: 335 SKWPQTSTSKGIID---PAVLSALYNDLNTVSAIQALH---------KLARESTKNHDL- 381
                +S S   ++    +  +A+ +D NT   I  L          K  +ES    DL 
Sbjct: 356 ENLATSSVSSFDVEKWKKSCYAAMNDDFNTPVLISYLFEAVKIINQIKEQKESITATDLG 415

Query: 382 -----LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                L  F      L  EV   H  K   + +E L++ R    + K+++ +D IR +L 
Sbjct: 416 VLQETLNTFVFDVLGLTNEVLSHHSEKTNGV-VELLIKLRKEARENKEWALSDQIRDELI 474

Query: 437 SKGFILEDYKN 447
             G  L+D K+
Sbjct: 475 ELGIQLKDGKD 485


>gi|41614851|ref|NP_963349.1| hypothetical protein NEQ055 [Nanoarchaeum equitans Kin4-M]
 gi|61216257|sp|Q74MI1|SYC_NANEQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|40068575|gb|AAR38910.1| NEQ055 [Nanoarchaeum equitans Kin4-M]
          Length = 457

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/474 (33%), Positives = 241/474 (50%), Gaps = 61/474 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGEKC 65
           +YNTL  +   F  ++   ++MY CG T YD AH+G+ R  +V D+L R+LR+  Y +  
Sbjct: 4   LYNTLTSRKEAFIPLEEPFVKMYTCGVTPYDKAHVGHLRTYLVTDLLRRILRFLGYYDIA 63

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT   N TDIDDKII+++++      +N     I  +N +        L  L     PR 
Sbjct: 64  VT---NFTDIDDKIIKKSQE------LNKDWKEIVEENIKYVFDVLKELKVLPFYVYPRV 114

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS----RRKIDEQKMGTRVPE 181
           T HI  +   +++++  G+AY+    I FD    P YG  S    +++ +++K       
Sbjct: 115 TYHIDDIANAVKSLLDRGYAYKGKYSIYFDVDKYPYYGQLSGIKSKKEWEQEKHLLE--- 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF LWK   P EP W +  G GRPGWHIECS MSS YLG+ FDIH GG DLI
Sbjct: 172 --DKKNPYDFALWKFKQPGEPYWNTIVGEGRPGWHIECSVMSSKYLGERFDIHLGGSDLI 229

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS     +      W+H G + + G KMSKS GN I   E +       + 
Sbjct: 230 FPHHENEIAQSETLYNVHPWVRYWVHIGMVQINGEKMSKSLGNIIEAKEFI-------KK 282

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAV--------- 351
           +    +R  +L THYR+P+D + + + +A+ +  K     +T+K I++  V         
Sbjct: 283 YKPEFVRFFLLSTHYRKPLDISEENIEQAQTIYKKLTDAYNTAKSIVENEVSYRFDKDVR 342

Query: 352 ---------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                    + A  +D+NT +AI +L+K+     +N +  PI   +          E  N
Sbjct: 343 IILDYYREMIKAFLDDMNTPTAIASLNKIVSIFNQNPE-YPIAYLTLRAF------EDFN 395

Query: 403 KNISIAIEKLVQ---------ERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           + +++  EK +           R +L + K++  AD IR  L+ KG  ++DYK+
Sbjct: 396 RIMNVWFEKPIDLDIINEIIEIRNMLRREKQYELADKIRDILQKKGIKIKDYKD 449


>gi|149194602|ref|ZP_01871698.1| cysteinyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135346|gb|EDM23826.1| cysteinyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 464

 Score =  248 bits (634), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/482 (35%), Positives = 255/482 (52%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY++  ++  EF  I    +R+YVCGPTVYD AH+G+AR  I FD+L R L    G K
Sbjct: 1   MKIYDSHLKEKVEFIPIKEKEVRIYVCGPTVYDDAHLGHARSSISFDLLRRTLE-CLGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII++  +   S      +  IT    +++++D   L       +P+
Sbjct: 60  -VTFVKNFTDIDDKIIKKMNETKKS------LKEITEYYIKRYLEDMDALNVKRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  +IQ ++  G+AY+  N +I FD S    Y   S +  D++ +  RV E  
Sbjct: 113 ATQSLEAMFEIIQILLDKGYAYKLPNGDIYFDVSKDEEYCKLSNKCQDDEVV-HRV-EIE 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLG----KVFDIHGGGL 238
            KKNPADF LWK      +  ++SP+G+GRPGWHIECSAM   ++        DIHGGG 
Sbjct: 171 GKKNPADFALWKACKGESDVCFDSPFGKGRPGWHIECSAMIKKHIAYDGEYEIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS CA      A  W+HNGF+ + G KMSKS GN   I + L      
Sbjct: 231 DLFFPHHENEEAQSHCA-YGGHLAKYWMHNGFVQINGEKMSKSLGNSFFIKDAL------ 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPA--- 350
            + +   V+R  ++ THYR P++F+ + L  ++  L K  +        SK   D +   
Sbjct: 284 -KHYSGEVLRFYLMSTHYRAPLNFSEEDLIASKKRLDKLYRLKKRIYGVSKKQQDKSFEE 342

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNAS--AHILGI---- 394
            +L+A+ +DLN   A+  + +  +++ +N D  P         + N      +LG+    
Sbjct: 343 NLLNAMSDDLNISKALAVVDEFIKDANENLDKNPKDKILKQKIVSNIEFINKLLGVGGSD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  +++     IE+L+ +R    K K F  AD IR +L+  G  ++D  N    +
Sbjct: 403 AYEYFQAGIDEETKKKIEELIAKRSEAKKEKNFELADKIRDELKEMGISIQDTPNGTKWE 462

Query: 453 RM 454
           R+
Sbjct: 463 RV 464


>gi|20089634|ref|NP_615709.1| cysteinyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|24418697|sp|Q8TSP6|SYC_METAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19914556|gb|AAM04189.1| cysteinyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 473

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 172/485 (35%), Positives = 249/485 (51%), Gaps = 59/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F+ +    I +Y CGPTVY+  HIGN R  ++ D + R L Y  G +
Sbjct: 2   LQVYNTLTREKEIFKPVKEGEISIYACGPTVYNMPHIGNYRTFLMTDNVLRALEYL-GYR 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  ++     + + D     T K T +F K    L        PR
Sbjct: 61  -VKLVMNITDIDDKTIRDSKA--AGMTLKD----FTDKYTAEFFKGLDMLNIKRAFAYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT ++  MI L + +I  G AYE +  + +  S  P YG  SR   D   +G  V  ++Y
Sbjct: 114 ATENVDGMIELARKLIEKGLAYEKDGSVYYRISGFPEYGKLSRLNFDNILIGASVDVDEY 173

Query: 184 HKKNPADFILWKRSTP--MEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L K STP  +E G  ++SPWG+ RPGWHIECS M+ +  G   DIH GG+D
Sbjct: 174 DKDNPRDFALLKASTPEEIERGIYYDSPWGKIRPGWHIECSVMAMNSFGPTLDIHTGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +     WIH   L +EG KMSKS  N  T+ E++E  K+GG
Sbjct: 234 LIFPHHENEIAQSEGATG-KPFVCTWIHGEHLIVEGEKMSKSKRNVFTLPEIVE--KYGG 290

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIID---PAV 351
                 V+R   L  HYR+ +D++      A+    +  +T  +     KG  D   P  
Sbjct: 291 E-----VVRFMFLSVHYRKKLDYSEAFAENAKNNYLRLKETLDNLEFSLKGADDKSYPGD 345

Query: 352 LS--------------ALYNDLNTVSAIQALHKLAR------ESTKNHDLLP----IFNA 387
           L               AL +D NT  A+    +L+R      E+ KN  +L     ++  
Sbjct: 346 LETLKALPELETQFRHALEDDFNTPRALTVFRELSRTANLYLEAGKNRKVLEKVHTLYRK 405

Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            + +LG+  +  KE + + +     +LV+ER    K K + ++D +R+++ + G+I++D 
Sbjct: 406 FSDVLGLFAQAGKEEIPEEVF----RLVEEREAARKKKDWGTSDTLREKIRTLGYIIQDK 461

Query: 446 KNPDN 450
           K   N
Sbjct: 462 KEGPN 466


>gi|154175222|ref|YP_001408206.1| cysteinyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166200139|sp|A7GYB4|SYC_CAMC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|112802485|gb|EAT99829.1| cysteinyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 460

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+++++++   F+ I      +Y+CGPTVYD AH+G+A+  + FD+L R+L     E 
Sbjct: 1   MQIFDSVKKQKVAFEPIKSGKASIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLLELGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TDIDDKI+++      S      +  IT +    +  D + L  + P  +P+
Sbjct: 60  -VKFVRNYTDIDDKILKKMSDTGKS------LEEITQRYIASYEADMSALNVMQPDIKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +  +I  IQ ++  G AYE  + I FDT     Y S S  K +   +  RV     
Sbjct: 113 ATQCLEAIINYIQKLVDKGVAYELKDGIYFDTGKDARYFSLS-GKDNNTDLIARVQSNDE 171

Query: 185 KKNPADFILWKRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGLD 239
           K++  DF+LWK     +  W ESP+GRGRPGWH EC AM   YL        DIH GG+D
Sbjct: 172 KRDEKDFVLWK----FDDKWYESPFGRGRPGWHSECVAMIKQYLSNDGEYEIDIHAGGID 227

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ  CA+  +K A  W+HNGF+ +   KMSKS GN   + + L       
Sbjct: 228 LLFPHHENEAAQCRCAEH-KKLAKYWMHNGFIKVNNEKMSKSLGNSFFVKDAL------- 279

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDP----A 350
           +S P   +R  ++ +HYR   +++ + L  A+  L K  +        S G  +P    +
Sbjct: 280 KSVPGEALRFYLIASHYRAHFNYSQEDLFAAKKRLDKIYRLKKRVLGVSAGTCEPNFKAS 339

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------------IFNASAHIL 392
           VL AL +DLNT  A+ ++ +  + +    DL P                  +F   A + 
Sbjct: 340 VLEALSDDLNTSKALASVDEFVKSANDGLDLDPKNKALKAQIAANLEFITRVFGVGA-MD 398

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G E  +  ++ +    I+ L+ ER    K + FS AD IRK+L +    + D
Sbjct: 399 GFEYFQFGVSDDEKAKIKALLDERTQAKKERNFSKADEIRKKLNAMDIAIMD 450


>gi|86141205|ref|ZP_01059751.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831764|gb|EAQ50219.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 495

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 175/488 (35%), Positives = 247/488 (50%), Gaps = 54/488 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K++IK+YN+L      F+ +   N+ MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 7   KQEIKVYNSLSGSKETFKPLLEGNVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHL- 65

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD           +DKI ++AR E    P+      +  + T  F    
Sbjct: 66  GYK-VRYVRNITDAGHLTDDADEGEDKIAKKARLEQIE-PME-----VVQQYTIDFHTIL 118

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
            +  CL P+ +P AT HI + I +I+ II +G AYE N  + FD    +   +YG  S R
Sbjct: 119 QKFNCLPPSIEPTATGHIIEQIEIIKEIIDNGFAYEKNGSVYFDVLKFNESHDYGKLSGR 178

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +++    TR +  +  KKN  DF LWK++ P     W SPWG G PGWH+EC+AMS+ Y
Sbjct: 179 NLEDMIANTRELTAQSEKKNAQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKY 238

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DL FPHHE EIAQS  ++  +   N W+H   L L G+KMSKS+GN I
Sbjct: 239 LGEQFDIHGGGMDLKFPHHECEIAQSEASNG-KNPVNYWLHANMLTLNGKKMSKSDGNNI 297

Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLS 335
              ++      F  + +   V R  ++  HYR  +DF+            RL EA  LL 
Sbjct: 298 FPAQIFTGDSPFLTKGFSPSVARFFVMQAHYRSVLDFSNDALLASEKGFNRLMEAVNLLE 357

Query: 336 KWPQTSTSK---GIIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKNHD 380
             P +  S     I   +   A+ +D N+   I  L + A+              T   D
Sbjct: 358 ALPTSEKSSIDVEIWKQSCYDAMNDDFNSPILIAQLFEAAKFIHQIKDSKAAITQTDLED 417

Query: 381 LLPIFNASA-HILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                 A    +LG+E      E     ++ AIE L+Q R      K F+++D IR QL 
Sbjct: 418 FKTTIKAFVFDVLGLEDVNAAAEANTDKLNGAIELLIQLRKEARANKDFATSDQIRDQLL 477

Query: 437 SKGFILED 444
             G  L+D
Sbjct: 478 ELGIQLKD 485


>gi|282880438|ref|ZP_06289145.1| cysteine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305541|gb|EFA97594.1| cysteine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 496

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/497 (33%), Positives = 248/497 (49%), Gaps = 59/497 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFVYNTLTRKKELFEPLHAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  + FD        +YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSVYFDIEKYNKDHHYGILSG 172

Query: 168 RKIDEQKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  +    K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINNSRELDGVGEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVRYWMHNNMITINGKKMGKSLGNF 291

Query: 286 ITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+ +    +        +P+ IR  +L  HYR  +DF+          ++RL      L
Sbjct: 292 ITLEQFFTGEHDSLEQPYSPMTIRFFILSAHYRGTVDFSNEALQASQKGLERLMNGVHDL 351

Query: 335 SKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQALHK--------LARESTKNH 379
            +    +TS       V         A+ +DL T   I  L +        L    + + 
Sbjct: 352 ERLQAAATSNEATHKFVAELRQQCYDAMNDDLQTPVVISKLFEACHIINTLLDHTGSIDQ 411

Query: 380 DLLPIFNASAHILGIEVC---KEHLNKN------ISIAIEKLVQERLILLKMKKFSSADY 430
             L       H+   ++     E  N N          ++ +++ R    + K ++++D 
Sbjct: 412 KDLDELKEVMHLFAFDLLGLKNEQGNDNDAREAAYGKVVDMVLELRAKAKQAKDWATSDQ 471

Query: 431 IRKQLESKGFILEDYKN 447
           IR  L + GF ++D K+
Sbjct: 472 IRDALAANGFEVKDTKD 488


>gi|315186109|gb|EFU19871.1| cysteinyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 470

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 250/493 (50%), Gaps = 62/493 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++++NT+ R    F   +   + MY CGPTVY++AHIGN R  I  DVL R L  + G 
Sbjct: 2   ELRLFNTMGRIQEPFVPREAGKVGMYTCGPTVYNYAHIGNLRTYIFEDVLRRTL-LHAGY 60

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           + V +V N+TD+          +DK+I+ AR+   S+        I    T+ F +DT +
Sbjct: 61  RLV-HVMNVTDVGHLTSDGDEGEDKVIKAARERGMSV------WEIAEFFTKAFFEDTDK 113

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L    P    +AT HIP+MI L++ +   GH Y A   + +D S+ P YG  +R  +DEQ
Sbjct: 114 LNIQRPEIVCKATEHIPEMIDLVKRLEERGHTYLAGGNVYYDISTFPRYGELAR--LDEQ 171

Query: 174 KM--GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLG 228
            +  G RV    HK++P DF+LW   +  E     W+SPWG+G PGWH+ECSAMS  YLG
Sbjct: 172 DLRAGARVGVDAHKRSPRDFVLWFTRSKFEHQAMVWDSPWGKGYPGWHLECSAMSMKYLG 231

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIH GG+D I  HH NEIAQS  A         W+H  FL ++  KMSKS GNF+T+
Sbjct: 232 EQFDIHCGGVDHIPVHHTNEIAQSEGATGRHPWVRYWLHAEFLVMDSGKMSKSKGNFLTL 291

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------------S 335
           + L E + F    +     R   L  HYR  + F+ + L  A                  
Sbjct: 292 SSL-EEEGFHPLDY-----RYFCLGAHYRSQLFFSWEALEAARNARRNLIEHLSGLHPRE 345

Query: 336 KWPQTSTSK--GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---- 389
            W QT  S+           A+ +DL+T  A+  L +    + K+ DL P   A      
Sbjct: 346 GWEQTPLSERGEAYKREFEEAIGDDLSTPRALAVLWR----AVKDEDLPPEERAVLTVTM 401

Query: 390 -HILGIEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             ILG+ + +   + + +   + +LVQ R  L K + F+ AD IR +L  +G I+ED   
Sbjct: 402 DRILGLSLAEAIASDDALEPELLELVQRREALRKQRDFAEADRIRDELARRGIIVED--T 459

Query: 448 PDNGQRMTRWKQK 460
           P       RWK+K
Sbjct: 460 PQG----PRWKRK 468


>gi|306836885|ref|ZP_07469840.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567226|gb|EFM42836.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 374

 Score =  248 bits (633), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 147/394 (37%), Positives = 213/394 (54%), Gaps = 43/394 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           ++I++T  R   +F+ I P +  +Y+CG T     HIG+ R  + FD+L R LL   Y  
Sbjct: 4   LRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGYD- 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  L P+ +P
Sbjct: 63  --VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNLLGVLPPSVEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYE------ANNEIIFDTSSI-----PNYGSFSRRKIDE 172
           RAT  + QM+  +Q +I  G AY       A   + FD  +       +YG+ S  +++E
Sbjct: 115 RATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDVEAWTKAEGSDYGALSGNRVEE 174

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG  FD
Sbjct: 175 MEQGES--DNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGSNFD 232

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I+ +L
Sbjct: 233 IHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSISNML 290

Query: 293 ETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSK 344
           E  +        PV +R  +   HYR  ++++   LTEA       E  + ++      +
Sbjct: 291 ELVR--------PVELRYYLGSAHYRSVLEYSESALTEAAAGYRRIEGFVKRF--AGVER 340

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
           G   P    A+ +D+    A+ A+H   R   K+
Sbjct: 341 GDWTPDFEDAMNDDIAVPKALAAIHTTVRAGNKD 374


>gi|288801920|ref|ZP_06407362.1| cysteine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288335962|gb|EFC74395.1| cysteine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 495

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 176/495 (35%), Positives = 243/495 (49%), Gaps = 59/495 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++  G
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 SLNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGVLSGRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           I +    +R +     K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 ITDMINNSRELAGVGEKRNQIDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GDHFDIHGGGMDLIFPHHECEIAQA-VASQGDEMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + +    +        +P+ IR  +L  HYR  +DF+ + L  AE    +          
Sbjct: 293 LEQFFTGEHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLAR 352

Query: 347 IDPAVLS-----------------ALYNDLNTVSAIQALHKLA---------RESTKNHD 380
           I PA  S                 A+ +DL T + I  L +           +      D
Sbjct: 353 IQPAAASDENTKKFVAGFRQKCYDAMNDDLMTPAVISTLFEACHLVNILIDHKAQISVDD 412

Query: 381 LLPIFNA----SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSADYIR 432
           L  +  A    +  ILG++  +   N     A  K+V   L L       K ++ +D IR
Sbjct: 413 LKELTEAMQLFAFDILGLQNERGANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKN 447
             L   GF ++D K+
Sbjct: 473 DALAEAGFQVKDTKD 487


>gi|225377341|ref|ZP_03754562.1| hypothetical protein ROSEINA2194_02988 [Roseburia inulinivorans DSM
           16841]
 gi|225210872|gb|EEG93226.1| hypothetical protein ROSEINA2194_02988 [Roseburia inulinivorans DSM
           16841]
          Length = 473

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 171/478 (35%), Positives = 248/478 (51%), Gaps = 50/478 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL +KI      +   I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTKKIETVIPHEDGKIAMYTCGPTVYHFAHIGNLRSYIMEDVLEKSLRYV 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V  V NITD+          +DK+++ A++EH ++        I    T  F +D
Sbjct: 61  GYD--VKRVMNITDVGHLASDADTGEDKMLKGAKREHKTV------MEIAKFYTDAFFED 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
             +L    P     ATN IP+ I +I+ ++  G+AY+A   + FDTS + NY  FS +  
Sbjct: 113 CKKLNIKTPDVVEPATNCIPEFIKMIEGLLEKGYAYQAGGNVYFDTSKLDNYYVFSTQAE 172

Query: 171 DEQKMGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSH 225
            E  +G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +   
Sbjct: 173 LETLVGVRDDVDEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCIGIK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           +LG+  DIH GG+D IFPHH NEIAQS       K  N W H   LN +  KMSKS G+F
Sbjct: 233 HLGEYMDIHCGGVDNIFPHHTNEIAQSESY-LGHKWCNYWFHVQHLNDKSGKMSKSKGDF 291

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-- 343
           +T++ L E      + +   V R+  L +HYR+P++F+ + +   +   +K  +      
Sbjct: 292 LTVSLLQE------KGYDPIVYRMFCLQSHYRKPLEFSYEIMDNTKAAYNKLVKRVAGLK 345

Query: 344 -KGIIDPAVLS--------ALYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHI 391
            +G  D  V +        A+ NDLNT  AI  L+ L +  T +   ++L+  F+     
Sbjct: 346 KEGETDQNVFAEYKAKFVDAISNDLNTSMAITVLYDLLKADTNDITKYELIKDFDKVLS- 404

Query: 392 LGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           L +E  K     E ++  +   +   ++ER    K K F+ AD IR +L +KG +++D
Sbjct: 405 LNLENAKSTETTEGVDAELESFVLAKIEERKEAKKAKDFAKADAIRDELLAKGIVIKD 462


>gi|282858921|ref|ZP_06268061.1| cysteine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588303|gb|EFB93468.1| cysteine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 495

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 173/496 (34%), Positives = 248/496 (50%), Gaps = 61/496 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++  G
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLQHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDSDEGDDKIEKKARLEQLE-PME-----IAQYYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRK 169
            L  L P+ +P AT HI +   L+  I+ +G+AYE+N  I FD +       YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEQLVDEIMKNGYAYESNGSIYFDVAKFNEDYKYGVLSGRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    +R +     K+N  DF LWKR+ P     W S W  G PGWH EC+AM   YL
Sbjct: 174 LNDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSKWSEGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GNHFDIHGGGIDLVFPHHECEIAQA-VASQGDEMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRL------------------- 327
           ++E             +P+ IR  +L  HYR  +DF+ + L                   
Sbjct: 293 LSEFFTGSHEKLEQAYSPMTIRFFILSAHYRGTVDFSNEALQASQKGYEKLMNGIEDLSR 352

Query: 328 --------TEAEILLSKWPQ---TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
                   T  +  +S + Q    + +  ++ PAV+S+L+   + V+ +   HK    + 
Sbjct: 353 VQTSGESDTNTKQFVSTFRQKCYDAMNDDLMTPAVISSLFEACHVVNLL-VDHKAQISAD 411

Query: 377 KNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSADYI 431
              +L  + N  A  ILG+   +   N     A  K+V   L L       K ++ +D I
Sbjct: 412 DLKELSEVMNIFAFDILGLRNERSANNDAREEAFGKVVDMVLDLRAKAKAEKNWAVSDQI 471

Query: 432 RKQLESKGFILEDYKN 447
           R  L   GF ++D K+
Sbjct: 472 RDALAEAGFNVKDTKD 487


>gi|325268337|ref|ZP_08134970.1| cysteine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989479|gb|EGC21429.1| cysteine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 495

 Score =  248 bits (632), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 180/504 (35%), Positives = 252/504 (50%), Gaps = 77/504 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ     ++ MYVCGPTVY   H+G+ARP I FD+L+R LR+  G
Sbjct: 2   QDLVIYNTLHRKKELFQPTAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGRN 173

Query: 170 IDEQKMGTR----VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           + +    +R    V EK+   N ADF LWKR+ P     W SPW  G PGWH EC+AM  
Sbjct: 174 LTDMINNSRELAGVGEKH---NQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGR 230

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GN
Sbjct: 231 KYLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGN 289

Query: 285 FITINELLETKKFGGRS------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----- 333
           FIT+ +      F GR       +    IR  +L  HYR  +DF+ + L  AE       
Sbjct: 290 FITLEQF-----FTGRHETLTQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLM 344

Query: 334 -----LSKWPQTSTSKG--------------------IIDPAVLSALYNDLNTVSAIQAL 368
                L++   ++ S G                    ++ PAV+S L+   + V+ I   
Sbjct: 345 NGIEDLARIQASAASDGNTGKFVSAFRKKCYEAMNDDLMTPAVISELFEACHLVN-ILID 403

Query: 369 HKLARESTKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKM----K 423
           HK    +    +L    +  A  ILG++  +   N     A  K+V   L L       K
Sbjct: 404 HKAQISAGDLKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEK 463

Query: 424 KFSSADYIRKQLESKGFILEDYKN 447
            ++ +D IR  L + GF ++D K+
Sbjct: 464 NWAVSDQIRDALSAAGFQVKDTKD 487


>gi|150009429|ref|YP_001304172.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|187629835|sp|A6LFT6|SYC_PARD8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149937853|gb|ABR44550.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 491

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 169/493 (34%), Positives = 255/493 (51%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +          +++ A  IR  +L  HYR  +DF+ + L  AE  LS+  +     
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351

Query: 340 -------TST--SKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLL 382
                  TST  +KG+ +     A+ +DLN+   I  L    R        ++T + + L
Sbjct: 352 MKLQPSATSTVDTKGLREK-CFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDL 410

Query: 383 PIFNASAHILGIEVC--KEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H+   ++   K+  + +         A++ L+  R      K ++++D IR +
Sbjct: 411 KELQEVFHLFLFDILGMKDEASASGNHYEAFGKAVDLLLSIRQQAKANKDWATSDKIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTAMGFEIKDTKD 483


>gi|86133639|ref|ZP_01052221.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85820502|gb|EAQ41649.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 492

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 174/490 (35%), Positives = 255/490 (52%), Gaps = 56/490 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++KIYN+L +   +F+ I    + MYVCGPTVY  AH+GN R  + FDV+YR L  + 
Sbjct: 6   ENQLKIYNSLSKSKEDFKPITEGYVGMYVCGPTVYSNAHLGNVRTFMFFDVVYRYL-LHL 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD           +D+I ++AR E    P+      +  K T  F    
Sbjct: 65  GYK-VRYVRNITDAGHLENDADEGEDRISKKARLEEIE-PME-----VVQKYTVDFHNVL 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
                L P+ +P AT HI + I +I+ II  G AYE N  + FD    +   NYG  S R
Sbjct: 118 ENYNFLPPSIEPTATGHIVEQIEMIKEIIEKGFAYEVNGSVYFDVLEYNKKENYGILSGR 177

Query: 169 KIDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
           K+++    TR  + +  KKNP DF LWK++       W SPW  G PGWH+ECS MS+ Y
Sbjct: 178 KVEDLIHNTRTLDGQSDKKNPQDFALWKKADDRHIMRWPSPWSDGFPGWHLECSVMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DL FPHHE EIAQS     + K  N W+H   L L  +KM+KS GNFI
Sbjct: 238 LGESFDIHGGGMDLKFPHHECEIAQSKTCSGV-KPVNYWMHTNMLLLNSQKMAKSTGNFI 296

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLS 335
             NE+L        +++ A V+R   +  +YR  +DF+            +L EA   L 
Sbjct: 297 LPNEILTGNNDILPKAFSASVVRFFNMQANYRSILDFSGDALEASEKGHSKLMEAVAFLD 356

Query: 336 KWPQTSTSKGIID---PAVLSALYNDLNT-------VSAIQALHKL--ARESTKNHDLLP 383
           K    STS   ++       +A+ +D NT         A++ ++++   + S    D L 
Sbjct: 357 KIEAGSTSTFNVENWKKDCYAAMNDDFNTPILISHLFEAVKLINQIKEGKGSLTETD-LT 415

Query: 384 IFNASA-----HILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
           +F  +       +LG+  E  +++ +K +   +E L++ R    + K ++ +D IR +L 
Sbjct: 416 LFKTTIKAFVFDVLGLIGEDAQDNSDK-VKGVVELLIKLRKEARENKDWALSDQIRDELV 474

Query: 437 SKGFILEDYK 446
           + G  L+D K
Sbjct: 475 ALGIQLKDGK 484


>gi|283781355|ref|YP_003372110.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439808|gb|ADB18250.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 515

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 167/525 (31%), Positives = 244/525 (46%), Gaps = 104/525 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL +    F  +    + +Y+CGPTVY  +HIG+    ++FD + R L Y     
Sbjct: 3   IRVYNTLSKTKEPFVPVVAGKVGIYLCGPTVYKESHIGHMVGPVIFDTIKRYLTY----- 57

Query: 65  C---VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           C   VT+V NITD+DDK+I + R+ +  +P+++    I ++    ++ +   L       
Sbjct: 58  CGYQVTWVVNITDVDDKLIGQMRERN--LPMSE----IAAEMVVDYLNNLKALGVDQIDR 111

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            P+AT ++  +I  I+++I    AY A  ++ FD      YG  S R  D Q+ G     
Sbjct: 112 MPKATEYMDDIIRFIEDLIKKDFAYAAGGDVFFDVGRDAQYGKLSNRSADSQQ-GEGGEA 170

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P+DF LWK + P EP W+SPWG+GRPGWHIECSAMS   LG+ FDIHGGGLDL+
Sbjct: 171 ASRKRSPSDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSRAILGETFDIHGGGLDLV 230

Query: 242 FPHHENEIAQS-CCADRIEKTANIWIHNGFL-------NLEGR-------------KMSK 280
           FPHHENE+AQS CC+ +     N W+HNG L        + G+             KMS+
Sbjct: 231 FPHHENELAQSECCSGK--PMVNFWMHNGLLRASSAAGKVGGKGDREEAAAPQPAGKMSR 288

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--- 337
           S G     + + E    GG       IR  +L THYR  + +  + L E+   L  +   
Sbjct: 289 SGGAGGLADVIAEQ---GGER-----IRFFLLKTHYRSTVVYGPEGLEESSTALESFYRF 340

Query: 338 ----------------PQTSTSKGIIDPA--------------VLSALYNDLNTVSAIQA 367
                           P      G  DPA               L  + +D NT  A+  
Sbjct: 341 FERFQRITKQRFFNLPPTLKREDGEFDPAGDPLLTLVHGFRQGFLEKMDDDFNTGGAMSD 400

Query: 368 LHKLARESTK-------------NHDLLPIFNASA-------HILGIEVCKEHLNKNISI 407
           L ++ RE  K              H  + I   +A        ILG+ + +         
Sbjct: 401 LFEMVREMNKFADQNKLDEVTQLPHPQVAILVKAAKTLRELTSILGLFLSQPAKRGGGGD 460

Query: 408 AIEKLVQERLILLKM-----KKFSSADYIRKQLESKGFILEDYKN 447
           A+   V + ++ L+      K F++AD IR  L   G  LED K 
Sbjct: 461 AVLPKVMQLMMELRTEARNRKDFATADRIRLGLAEMGIALEDRKG 505


>gi|89897982|ref|YP_515092.1| cysteinyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|109894891|sp|Q255U1|SYC_CHLFF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89331354|dbj|BAE80947.1| cysteinyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 476

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 163/482 (33%), Positives = 246/482 (51%), Gaps = 58/482 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +YNT  R    F A + + +++Y CGPTVYD+AHIGN R  +  D+L R L ++  
Sbjct: 9   QNLYLYNTATRTKELFSASN-APVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRTLLFF-- 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V ++ NITD+DDK +  A ++      N ++   T+   Q F +D   L  L     
Sbjct: 66  GYSVKHIMNITDVDDKTLAGACRK------NISLEEYTAPFIQAFFEDIAELNILPADVY 119

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-P 180
           P AT++IPQMI  IQ ++    AY   ++ + F     P YG  S+ K+ + +  +RV  
Sbjct: 120 PHATHYIPQMIKAIQKLLDENIAYIGQDSSVYFSIKKFPTYGKLSQLKLQDLQCCSRVTS 179

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K+N +DF+LWK       G   WESP+G+GRPGWH+ECS M+   LG   DIH GG
Sbjct: 180 DEYDKENLSDFVLWKAYDEQRDGHIYWESPFGKGRPGWHLECSIMAMELLGSSIDIHAGG 239

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+    
Sbjct: 240 VDNIFPHHENEIAQSESLSH-KPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD---- 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGI 346
             R +    IR  +L +HYR  ++FT + L      L +           +P+++T    
Sbjct: 295 --RGFSGEEIRYLLLQSHYRMQLNFTEEGLLACRQALKRLRDFISRLENPYPESTTISDE 352

Query: 347 ID-------PAVLSALYNDLN--------------TVSAIQALHKLARESTKNHDLLPIF 385
           ID        A   ++ NDLN              T S I        ++    DLL   
Sbjct: 353 IDQQGKTFLKAFSDSIANDLNIAAALAALFDFIHQTNSFIDKSKFTQADANYILDLLKKI 412

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           N    IL     +E     I   + +LV++R +  + K ++ AD  R Q+ S G+++ED 
Sbjct: 413 NTVLGILQFSATQE-----IPDEVMQLVEKREVARREKNWAQADAFRDQVASLGYLIEDS 467

Query: 446 KN 447
           K+
Sbjct: 468 KS 469


>gi|227503949|ref|ZP_03933998.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227199471|gb|EEI79519.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 477

 Score =  247 bits (631), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/481 (33%), Positives = 245/481 (50%), Gaps = 61/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R   +F  +   +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 7   LRIFDTATRTQRDFVPVKEGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLMAQGLD- 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +     P  + +S       ++F K    L  L P+ +PR
Sbjct: 66  -VAFVRNVTDIDDKILNKAAEN--GRPWWEWVSTYE----REFTKAYNTLGVLPPSVEPR 118

Query: 125 ATNHIPQMIYLIQNIILHGHAY---------EANNEIIFDTSSI-----PNYGSFSRRKI 170
           AT  + QM+  +Q +I  G AY         +    + FD ++       +YGS S  ++
Sbjct: 119 ATGFVTQMVDYMQRLIDAGFAYAVPDDTAGVDGAGSVYFDVTAWNAAEGSDYGSLSGNRV 178

Query: 171 DEQKMG-TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           ++   G  +      K+ P DF LWK + P EP W +PWG+GRPGWH+ECSAMS++YLG 
Sbjct: 179 EDMDQGEGQEALARGKRGPQDFALWKGAKPGEPSWPTPWGKGRPGWHLECSAMSTYYLGS 238

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIH GGLDL FPHHENE+AQS  A   +K AN W+HN ++ + G KMSKS GN + I+
Sbjct: 239 EFDIHCGGLDLQFPHHENEVAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLAID 296

Query: 290 ELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA---------------EIL 333
            +LE  +        PV +R  +   HYR  ++++   LTEA               +++
Sbjct: 297 NMLEIVR--------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVNKFDDLV 348

Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFNASAHIL 392
           +  W Q        D AV  AL     TV A  +AL + + +  +         A A +L
Sbjct: 349 VGDWTQGFEDAMNDDIAVPKALAEIHTTVRAGNKALAEGSADEARK--AAESVRAMAAVL 406

Query: 393 GIEVCKEH-----LNKNISIAIEKLVQ---ERLILLKMKK-FSSADYIRKQLESKGFILE 443
           G +   E      L  N   A++ LVQ   ER    + +K +++AD +R +L + G  + 
Sbjct: 407 GFDPLDEQWKDGTLTSNADAALDVLVQAELERRTQARAEKDWATADAVRDRLAAAGITIT 466

Query: 444 D 444
           D
Sbjct: 467 D 467


>gi|256820848|ref|YP_003142127.1| cysteinyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582431|gb|ACU93566.1| cysteinyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 492

 Score =  247 bits (631), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 171/493 (34%), Positives = 250/493 (50%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MEHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRTLKFL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +D+ ++++R E    P+      I  K T  F K 
Sbjct: 61  -GYK-VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFS 166
                 L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  S
Sbjct: 113 LEIFNLLPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELS 172

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           RR I+E    TR +  +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+
Sbjct: 173 RRNIEELFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMST 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL FPHHE EIAQ   A   E     W+H   L + G++MSKS GN
Sbjct: 233 KYLGNQFDIHGGGMDLKFPHHECEIAQG-KAGHGESPVRYWMHANMLTMNGQRMSKSTGN 291

Query: 285 FITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
           +I   EL+  +  F  + +   VIR   +  HYR  +D +            RL EA  +
Sbjct: 292 YILPMELISGENTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAIKI 351

Query: 334 LSKWPQTS---TSKGIID--PAVLSALYNDLNTVSAIQALHKLAR------------EST 376
           L++    +   TS  I +       AL +D N+   I  L +  +              T
Sbjct: 352 LNELTTDTELPTSLPIAEWKQKCYDALLDDFNSPILIAHLFEAVKWIFQVKNDEERISVT 411

Query: 377 KNHDLLPIFNASAH-ILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           +  +L  + NA    +LG++  ++ +N N  +   ++ L+  R+     K +  +D IR 
Sbjct: 412 ELKELKELMNAFVFDVLGLQSEQQTVNNNDKLDGVLQLLINMRMEARANKDWVLSDKIRD 471

Query: 434 QLESKGFILEDYK 446
           +L + G  L+D K
Sbjct: 472 ELLALGIQLKDGK 484


>gi|167045622|gb|ABZ10271.1| putative tRNA synthetases class I (C) catalytic domain protein
           [uncultured marine microorganism HF4000_APKG10K24]
          Length = 754

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 159/465 (34%), Positives = 230/465 (49%), Gaps = 40/465 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL ++I E Q I+P  +RMY CGPTVY  AHIGN R  ++ D + R L     E 
Sbjct: 24  LRIFNTLTKQIEEIQPIEPGKVRMYTCGPTVYRDAHIGNLRTYLMADWIRRALEIKGIE- 82

Query: 65  CVTYVRNITDID-----------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
            V +V+NITD+            DK+I  A +E            I      +F  D  R
Sbjct: 83  -VHHVKNITDVGHMRQELVEAGGDKMILAALEE------GKTTQDIAQFYADRFHADEAR 135

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           +  L     P AT HIP+M+ +++ ++ +G+AYEA   I F+ +S  +YG  SR    + 
Sbjct: 136 MNILPAHVFPWATQHIPEMVAIVEKLMANGNAYEAGGNIYFNVNSFADYGKLSRNTGADL 195

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             G R      KK+P DF LWK + P  +  W SPWG G PGWHIECSAM+S Y G+ FD
Sbjct: 196 LEGVRAEADPLKKDPRDFTLWKAAEPGRDLKWASPWGDGFPGWHIECSAMASKYFGESFD 255

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H GG+D IFPHHE+EIAQS  A   ++    W+H   L  +G KM+KS+GN   I EL+
Sbjct: 256 LHTGGVDNIFPHHEDEIAQSEAAFG-QQHVRYWVHAQHLLADGAKMAKSSGNVFLIEELI 314

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----W-----PQTST 342
                  R +     R   L   YR  ++FT   L  AE  L+      W     P+ S 
Sbjct: 315 ------FRGFDPLAFRYLCLTVRYRHRMNFTFNSLRAAEKALTSMRQRFWIWKGLPELSQ 368

Query: 343 SKGIIDP---AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
               +D        ++ NDL+   A+     + +        L +      I G+++   
Sbjct: 369 LPSEVDEWRRKFWESVENDLDLPGALALTWDMFKSDLPGQAKLALLIEFDEIFGLDLDAL 428

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + +I   +   V +R  L     ++ AD IR  + S+GF++ED
Sbjct: 429 SKSHDIPAPVTAAVGQRESLRYNSDYAPADTIRTDVLSQGFLVED 473


>gi|255016291|ref|ZP_05288417.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 491

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 169/493 (34%), Positives = 255/493 (51%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++AR E    P+      +      ++ + 
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE-PME-----VVQYYLNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHRYGILSG 172

Query: 168 RKIDEQKMGTRVPEKYHKK-NPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I++    TR  +   +K N  DF LWK + P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +          +++ A  IR  +L  HYR  +DF+ + L  AE  LS+  +     
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351

Query: 340 -------TST--SKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLL 382
                  TST  +KG+ +     A+ +DLN+   I  L    R        ++T + + L
Sbjct: 352 MKLQPSATSTVDTKGLREK-CFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDL 410

Query: 383 PIFNASAHILGIEVC--KEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                  H+   ++   K+  + +         A++ L+  R      K ++++D IR +
Sbjct: 411 KELQEVFHLFLFDILGMKDEASASGNHYEAFGKAVDLLLSIRQQAKANKDWATSDKIRNE 470

Query: 435 LESKGFILEDYKN 447
           L + GF ++D K+
Sbjct: 471 LTAMGFEIKDTKD 483


>gi|315224033|ref|ZP_07865874.1| cysteine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946004|gb|EFS98012.1| cysteine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 492

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 170/493 (34%), Positives = 251/493 (50%), Gaps = 56/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MEQRLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRTLKFL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +D+ ++++R E    P+      I  K T  F K 
Sbjct: 61  -GYK-VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFS 166
                 L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  S
Sbjct: 113 LEIFNLLPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELS 172

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           RR I+E    TR +  +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+
Sbjct: 173 RRNIEELFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMST 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL FPHHE EIAQ   A   E     W+H   L + G++MSKS GN
Sbjct: 233 KYLGNQFDIHGGGMDLKFPHHECEIAQG-KAGHGESPVRYWMHANMLTMNGQRMSKSTGN 291

Query: 285 FITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
           +I   +L+  +  F  + +   VIR   +  HYR  +D +            RL EA  +
Sbjct: 292 YILPMQLISGENTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAMKI 351

Query: 334 LSKW---PQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLAR------------EST 376
           L++     +  TS  I +       AL +D N+   I  L +  +              T
Sbjct: 352 LNELTTDAELPTSLPIAEWKQKCYDALLDDFNSPILIAHLFEAVKWIFQVKNGEEKISVT 411

Query: 377 KNHDLLPIFNASAH-ILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRK 433
           + ++L  + NA    +LG++  ++  N N  +   ++ L+  R+     K +  +D IR 
Sbjct: 412 ELNELKELMNAFVFDVLGLQNEQQTANNNDKLDGVLQLLINMRMEARANKDWVLSDKIRD 471

Query: 434 QLESKGFILEDYK 446
           +L + G  L+D K
Sbjct: 472 ELLALGIQLKDGK 484


>gi|46446869|ref|YP_008234.1| cysteinyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|61216206|sp|Q6MBU0|SYC_PARUW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46400510|emb|CAF23959.1| putative cysteinyl tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 478

 Score =  247 bits (630), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 162/478 (33%), Positives = 249/478 (52%), Gaps = 58/478 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT ER+  E + I  ++I++Y CGPTVY +AHIGN R  I  D+L R ++++    
Sbjct: 11  LRLYNTAERQKQELKPIKGNHIQLYTCGPTVYHYAHIGNFRTYIFEDLLRRTIQFF--GF 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T V N+TD+DDK I  A      I     +   T      F +D   L   +  + P 
Sbjct: 69  SITQVMNLTDVDDKTIRGA------IAKGITLDEYTKPYKDAFFEDLKTLNIQSAEYYPA 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT++IP MI +I+ ++    AY+  +  I +  +  P YG  S   +++ + G       
Sbjct: 123 ATDYIPAMIEMIKVLLDKKVAYKGGDGSIYYAINQFPRYGCLSHLHLEDLQAGASERVAA 182

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K++ ADF+LWK       G   WESP+G GRPGWH+ECSAM+ H LG+  DIH GG
Sbjct: 183 DEYEKEHVADFVLWKSYDSERDGQIYWESPFGLGRPGWHLECSAMAMHLLGETIDIHVGG 242

Query: 238 LDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           +D +FPHHENEIAQS  C+ +  K  N+W+H   L ++ +KMSKS GNF T+ +LL  K 
Sbjct: 243 IDNMFPHHENEIAQSEACSGK--KFVNLWMHAEHLVVDQKKMSKSLGNFYTLRDLL-NKG 299

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGII 347
           F G       +R  +L THY+  ++FT Q +   +  L +           QT  S G +
Sbjct: 300 FTGIQ-----VRYLLLQTHYKTQLNFTFQGVESVKSSLQRLNDFIQRIYNIQTLQSDGQV 354

Query: 348 DPAV-------LSALYNDLNTVSAIQALHKLARE----------STKNHD----LLPIFN 386
           D  V         AL +DLN  SA+ A+    RE          S K  +    L+  F+
Sbjct: 355 DLLVNDALIRFAEALADDLNISSALAAIFDFVREINCLCDVNQVSQKEAETVINLMKKFD 414

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +L  +  +E +  ++  A  K  Q R    + K ++ +D +R  +  +G+++ED
Sbjct: 415 TILGVLTFDKREESIPVDLQEAFAKRQQAR----QEKNWTLSDELRDFIHQRGYLIED 468


>gi|305680320|ref|ZP_07403128.1| cysteine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659851|gb|EFM49350.1| cysteine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 507

 Score =  247 bits (630), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 158/477 (33%), Positives = 234/477 (49%), Gaps = 57/477 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + +F  + P    MY+CG T     HIG+ R  + FD++ R L       
Sbjct: 40  LRIFDTRTRSLRDFVPLTPGRATMYLCGATPQTNPHIGHVRSGVAFDIVRRWL--MASGY 97

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +       N       S   + F      L  L P+ +PR
Sbjct: 98  DVAFVRNVTDIDDKILTKAAE------ANRPWWEWVSTYERAFSHAYDMLGVLPPSVEPR 151

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGTRV 179
           AT H+ QMI  +Q +I  G AY A   + FD ++       +YGS S   + + + G   
Sbjct: 152 ATGHMTQMITYMQRLIDAGFAYPAQGSVYFDVAAWSAADGSDYGSLSGNNLIDMEQGET- 210

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +   K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS+ YLG  FDIHGGGLD
Sbjct: 211 -DNVGKRSPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTWYLGPEFDIHGGGLD 269

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQ+  A   +  A  W+HN ++ + G KMSKS GN +++ E+++  +   
Sbjct: 270 LQFPHHENEIAQAHAAG--DGFARYWMHNHWVTIAGEKMSKSLGNVLSVPEIVKLVR--- 324

Query: 300 RSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWP----QTSTSKGII 347
                PV +R  +   HYR  ++++   L EA       E  + K      Q     G  
Sbjct: 325 -----PVELRYYLGSAHYRSVLEYSPDALQEAAQGYRRIESFVEKVDDLPGQPPVPVGEW 379

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCK 398
             A   A+ +D+    A+  +H   R            +   +     A   +LG +   
Sbjct: 380 TDAFAEAMNDDIGVPRALAEIHNTVRAGNSALAMRDYGEARRMAARVRAMTEVLGFDPLS 439

Query: 399 EHLNKNIS-------IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILED 444
           +      S       +A++ LVQE L    I   +K + +AD +R +L   G I+ D
Sbjct: 440 DQWQDGESVRFDAPMVALDALVQEELDRREIARSVKDWETADAVRDRLLEVGIIVTD 496


>gi|148926966|ref|ZP_01810643.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845050|gb|EDK22147.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 462

 Score =  247 bits (630), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 234/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LAQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSGQTLEE------ITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNVSK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F++AD IR+QL SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN 453


>gi|302346055|ref|YP_003814408.1| cysteine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150108|gb|ADK96370.1| cysteine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 495

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 178/498 (35%), Positives = 243/498 (48%), Gaps = 65/498 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++  G
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
            L  L P+ +P AT HI +   L+  I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 SLNVLPPSIEPHATGHIIEQEELVNQILANGYAYESNGSIYFDVEKYDKDHHYGVLSGRN 173

Query: 170 IDEQKMGTR----VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           I +    +R    V EK+   N  DF LWKR+ P     W SPW  G PGWH EC+AM  
Sbjct: 174 ITDMINNSRELAGVDEKH---NQIDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGR 230

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GN
Sbjct: 231 KYLGDHFDIHGGGMDLIFPHHECEIAQA-VASQGDEMVKYWMHNNMITINGQKMGKSLGN 289

Query: 285 FITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           FIT+ +    +        +P+ IR  +L  HYR  +DF+ + L  AE    +       
Sbjct: 290 FITLEQFFTGEHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIED 349

Query: 344 KGIIDPAVLS-----------------ALYNDLNTVSAIQALHKLA---------RESTK 377
              I PA  S                 A+ +DL T + I  L +           +    
Sbjct: 350 LARIQPAAASDENTKKFVAGFRQKCYDAMNDDLMTPAVISTLFEACHLVNILIDHKAQIS 409

Query: 378 NHDLLPIFNA----SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSAD 429
             DL  +  A    +  ILG++  +   N     A  K+V   L L       K ++ +D
Sbjct: 410 ADDLKELTEAMQLFAFDILGLQNERGANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSD 469

Query: 430 YIRKQLESKGFILEDYKN 447
            IR  L   GF ++D K+
Sbjct: 470 QIRDALAEAGFQVKDTKD 487


>gi|268316373|ref|YP_003290092.1| cysteinyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333907|gb|ACY47704.1| cysteinyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 504

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 152/398 (38%), Positives = 207/398 (52%), Gaps = 38/398 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++YNTL R I     ++ + +R+Y CGPTVY +AHIGN R  +  D++ R+ +   G
Sbjct: 6   KTLRLYNTLTRSIEPIYPLERNRLRLYACGPTVYTYAHIGNFRSFLTADLIVRVAQAL-G 64

Query: 63  EKCVTYVRNITDI-------------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            + V YV N+TD+             +DK+    R E      N  I  +    TQ F++
Sbjct: 65  WQTV-YVCNVTDVGHLTVDDYADASGEDKLERALRSEEGRRFPN--IWDLARYYTQAFLE 121

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           D   L  + P  +PRAT HI Q I  I+ ++  GHAYE    + F   S P+YG  S  +
Sbjct: 122 DWQTLKLVEPDVRPRATEHIRQQILAIEQLVKTGHAYETRQGVYFHVPSFPDYGKLSGNR 181

Query: 170 IDEQ--KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
             EQ  +    V +   K++P DF LWK+       W SPWG G PGWHIECS MS  YL
Sbjct: 182 DPEQLARAVRDVVQDPEKRDPRDFALWKKDEKHLMQWYSPWGWGFPGWHIECSVMSMEYL 241

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FD+H GG DLIFPHHE EIAQ+      +  A  W+H  FL +EG KMSKS GNF T
Sbjct: 242 GETFDLHLGGEDLIFPHHECEIAQAESLTG-KPLARYWVHTRFLLVEGEKMSKSKGNFFT 300

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           + EL+   + GG+      +R A++   YREP++FT          VQR  EA   +   
Sbjct: 301 VRELIFPPEAGGQGIDPMALRYALISGKYREPLNFTRKHLRDSIRIVQRYQEAARHVEAA 360

Query: 338 PQTSTSK--------GIIDPAVLSALYNDLNTVSAIQA 367
            ++  S           I    L AL +DLNT  A+ A
Sbjct: 361 LESDRSGPDRLGDRLSTIYDKTLEALCDDLNTPVALAA 398


>gi|86150258|ref|ZP_01068485.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597534|ref|ZP_01100768.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562430|ref|YP_002344209.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|11387149|sp|Q9PPB8|SYC_CAMJE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|85839374|gb|EAQ56636.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190126|gb|EAQ94101.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360136|emb|CAL34930.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926048|gb|ADC28400.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928267|gb|EFV07583.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929359|gb|EFV08565.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 462

 Score =  246 bits (629), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 234/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LAQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSGQTLEE------ITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIGIKSEIAKQILEILNDDLNVSK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGFMDATLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F++AD IR+QL SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN 453


>gi|308450233|ref|XP_003088225.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
 gi|308248740|gb|EFO92692.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
          Length = 364

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 145/364 (39%), Positives = 207/364 (56%), Gaps = 39/364 (10%)

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRR 168
           D   L CLAP   PRATN+I QM  +I N++  G AY  AN ++ F+     NYG  S R
Sbjct: 4   DAENLGCLAPDEAPRATNYIDQMQNMIGNLVNKGTAYPSANGDVYFEVEKFENYGRLSGR 63

Query: 169 KIDEQKMGT--RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
           K+D+ + G   RV  +  KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  
Sbjct: 64  KLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCC 123

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG DL+FPHHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF 
Sbjct: 124 LGNHFDIHGGGSDLLFPHHENEIAQSEAATD-EQYVNYWMHVGFINVDGEKMSKSLGNFF 182

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTST 342
           TI +++E        +   VIR  ++ +HYR  +DF+   L EA+    + +    + + 
Sbjct: 183 TIRDVME-------KFHPEVIRYFIVSSHYRSRVDFSDFALKEAKLRFLVFIMHLKRINK 235

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNAS----AHILG 393
           S  I  P   +++ +D NT  AI  L ++ +E       +N     ++ ++     +ILG
Sbjct: 236 SMAI-KPQ--TSMRDDFNTSEAIAVLFEIIKELNRAVKEENAAQSTLYYSTLRHLTNILG 292

Query: 394 I-----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +           ++ +E L  +    IE  +Q+R+   K K F+ AD IR+ L ++G +L
Sbjct: 293 LVQYNVDDFLKSDIGQEALGLS-EADIEDFIQQRVDAKKNKDFARADEIRQSLLAQGVVL 351

Query: 443 EDYK 446
           ED +
Sbjct: 352 EDTR 355


>gi|288928857|ref|ZP_06422703.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329841|gb|EFC68426.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 543

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 165/491 (33%), Positives = 243/491 (49%), Gaps = 59/491 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FDV++R L++  G K V
Sbjct: 54  IYNTLTRKKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVVFRYLQHQ-GYK-V 111

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            YVRNITD+          DDKI ++AR E    P+      I    T  +      L  
Sbjct: 112 RYVRNITDVGHLEHDADDGDDKIAKKARLEQLE-PME-----IAQHYTNTYHAAMQLLNV 165

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS---SIPNYGSFSRRKIDEQ 173
           L P+ +P+A+ HI +   L++ I+ +G AYE+N  I FD +       YG  S R +++ 
Sbjct: 166 LPPSIEPQASGHIIEQEELVKKILANGFAYESNGSIYFDIAKYNETHRYGILSGRNLEDV 225

Query: 174 KMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              +R  +    K+N ADF LWK + P     W SPWG G PGWH EC+AM   YLG+ F
Sbjct: 226 LDASRKLDGVGEKRNQADFALWKHAQPEHIMRWPSPWGDGFPGWHCECTAMGRKYLGEHF 285

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A+  E+    W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 286 DIHGGGMDLIFPHHECEIAQAVAAEG-EQMVRYWMHNNMITINGQKMGKSLGNFITLEQF 344

Query: 292 LETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                       +P+ IR  +L  HYR  +DF+ + L  +E  L +          I PA
Sbjct: 345 FNGAHPALEKAYSPMTIRFFILSAHYRGTVDFSNEALQASEKGLERLLNGIADLQRIQPA 404

Query: 351 VLS-----------------ALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIF 385
             S                 A+ +D  T   +  L +  R        ++  + + L   
Sbjct: 405 KTSDEATATIVNELPRKCYEAMNDDFQTPMVLSHLFEACRLINTLIDHKAQISAEHLEQL 464

Query: 386 NASAHILGIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
             + H+   ++   +           +     ++ ++  R      K ++++D IR +L 
Sbjct: 465 ATTMHLFAFQLLGLNADNGNNNDAREEAFGHVVDMVLDLRAKAKADKDWATSDRIRDELA 524

Query: 437 SKGFILEDYKN 447
           S GF ++D K+
Sbjct: 525 SAGFEVKDTKD 535


>gi|302873995|ref|YP_003842628.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307689757|ref|ZP_07632203.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576852|gb|ADL50864.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 472

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 166/477 (34%), Positives = 249/477 (52%), Gaps = 49/477 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K    YNTL +K+ +F   +   ++MY CGPTVY +AHIGN R  I+ D+L + L+Y   
Sbjct: 2   KDFNFYNTLTKKVEKFIPNEEGKVKMYTCGPTVYHYAHIGNLRSYIMEDILEKYLKYIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V  V NITD+          +DK+++ A++E  ++        I    T  F  D  
Sbjct: 62  D--VKRVMNITDVGHLASDADVGEDKMLKGAKREKKTVLE------IAKFYTDAFFADCK 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
           +L    P     ATN I   I +I  ++   +AY A + + FDTS + +Y   S +  +E
Sbjct: 114 KLNIDIPEIIEPATNCIEDFINMISELLKKDYAYIAGDNVYFDTSKLDSYHVLSNQSEEE 173

Query: 173 QKMGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
             +  R  V E  +K+N  DF+LW    +    E  WESPWG G PGWHIECS++S  +L
Sbjct: 174 LMVAVRDDVEEDTNKRNKNDFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSSISMKHL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+  DIH GG+D IFPHH NEIAQS  A    K  N W H  +LN +  KMSKS G+F+T
Sbjct: 234 GEYIDIHCGGIDNIFPHHTNEIAQS-EAFVGHKWCNYWFHIHYLNDKTGKMSKSKGDFLT 292

Query: 288 INELLETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRL---TEAEILLSKWPQTSTS 343
           ++ LLE+K +       P+I R+  L +HYR+P+ F+ + L     A   L K       
Sbjct: 293 VS-LLESKNYN------PLIYRMFCLQSHYRKPLVFSYEVLDNVVSAYNKLIKRVGDLKD 345

Query: 344 KGIIDPAVLSA--------LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           +G +D A ++         L NDLNT SA   ++ L ++   +   L +      +L I 
Sbjct: 346 EGELDQAKVAEYTEQFTNFLGNDLNTASAFTVIYDLLKDDISDKTKLHLVKDFDRVLSIG 405

Query: 396 VCK------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +        + ++K++   +   ++ER    K K F+SAD IR++L  KG +++D K
Sbjct: 406 LTNIDNNKIQEIDKDLEEFVTSKIEERNEARKRKDFASADAIRQELLDKGIVIKDSK 462


>gi|156974741|ref|YP_001445648.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156526335|gb|ABU71421.1| hypothetical protein VIBHAR_02459 [Vibrio harveyi ATCC BAA-1116]
          Length = 457

 Score =  246 bits (628), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 159/460 (34%), Positives = 238/460 (51%), Gaps = 37/460 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K++++NTL R +  F  I+   + +Y CGPTVYD+AH GN R  +  DVL R L     +
Sbjct: 5   KLQLFNTLGRTLEPFNTIETGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLELNGYD 64

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V +V NITD+          +DK+ + AR++      N +   I       F+ D  R
Sbjct: 65  --VNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAKYFEDVFLDDLNR 116

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L  + P+   RAT HI + I  +  +   G  Y+ ++ + FD++ +P+YG  ++   +  
Sbjct: 117 LNIIEPSIICRATEHIQEQIEFVLELEQKGFTYQTSDGVYFDSAKLPDYGKLAKLDREGL 176

Query: 174 KMGTRVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           + G RV E   KK+P DF LWK S  TP +  WESPWG G PGWHIECSAM+  YLG+VF
Sbjct: 177 EAGIRV-EMAEKKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGEVF 235

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG D I  HH NEIAQ C A      AN W+H  FL L   K+SKS G  + ++ L
Sbjct: 236 DIHVGGEDHIPVHHTNEIAQ-CQAKNGHVQANYWLHGFFLQLNKEKISKS-GTSLRLDAL 293

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIID 348
           +E      + +     R  +L +HYR  + FT + L  A+  L +    +++    G +D
Sbjct: 294 IE------KGYDPLAYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKASALPEGGKVD 347

Query: 349 PA----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                  +S + NDL    AI  + +L   +  + D          + G+E+ K    + 
Sbjct: 348 QTNVERFMSLINNDLAMPQAIALMWELLGSALNDADKKATARYFDRVFGLELDKVE-EEE 406

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I   I +LV+ RL + K K++  AD IR+++   G+ + D
Sbjct: 407 IPSEILELVELRLQMKKQKEYQQADEIRQKVAELGYRIND 446


>gi|205356771|ref|ZP_03223530.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345338|gb|EDZ31982.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 462

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 163/461 (35%), Positives = 234/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LVQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMTQSGQTLEE------ITEFYIKSYEEDMRALNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +E+ +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNVSK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F++AD IR+QL SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN 453


>gi|330443848|ref|YP_004376834.1| cysteinyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328806958|gb|AEB41131.1| cysteinyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 475

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 168/481 (34%), Positives = 248/481 (51%), Gaps = 54/481 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +K + +YNT  R+   F     S +++Y CGPTVYDFAHIGN R  I  D+L R L +  
Sbjct: 7   QKPLYLYNTASRQKEAFSPY-ASPVKLYTCGPTVYDFAHIGNFRTYIFEDLLKRTLIFL- 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+V NITD+DDK +  A ++  S+         T    Q F +D   L       
Sbjct: 65  -GYSVTHVMNITDVDDKTLAGACKQGISL------QEYTQPYIQAFFEDLETLHISRADA 117

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR-V 179
            PRAT++IPQMI  I+ ++  G AY  ++  + F  S   +YG  S   + + +  T+  
Sbjct: 118 YPRATHYIPQMIQAIEKLLDQGAAYIGHDASVYFSISRFSSYGKLSHLHLQDLQCCTQNT 177

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K+N  DF+LWK       G   WESP+G+GRPGWH+ECS M+   LG+  DIH G
Sbjct: 178 SDEYDKENLCDFVLWKAYNSERDGKIYWESPFGKGRPGWHLECSIMAMELLGESIDIHAG 237

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D IFPHHENEIAQS      +  A  W+H+  L ++G+KMSKS GNF+T+ +L     
Sbjct: 238 GVDNIFPHHENEIAQSETLSG-KPFARYWLHSEHLLVDGKKMSKSLGNFLTLRDLTH--- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WP---QTST 342
              R +    +R  +L +HYR  ++FT + L      L +           +P   Q S 
Sbjct: 294 ---RGFSGEELRYMLLQSHYRTQLNFTEEGLLSCRQALKRLRDFISRLQEPYPDGEQPSE 350

Query: 343 SKGIIDPAVLS----ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-HILGIEVC 397
           +   +   +L+    AL NDLN    + +L     E+    D      A A HIL +   
Sbjct: 351 ATRTVAKTLLTNFTDALTNDLNIAVGLASLFDFVHETHSLIDAGSFSKADAEHILAL--- 407

Query: 398 KEHLNK-------NISIAIE----KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +HLN+       + SI+I     +LV +R      K +  AD++R ++ + GF++ED K
Sbjct: 408 LKHLNQVLKVLPISASISIPDRVWELVMKREKARTSKSWKEADFLRNEILALGFVVEDSK 467

Query: 447 N 447
           +
Sbjct: 468 S 468


>gi|281422306|ref|ZP_06253305.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403627|gb|EFB34307.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 496

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 178/502 (35%), Positives = 249/502 (49%), Gaps = 69/502 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ IYNTL R    F  +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLLIYNTLTRTKERFTPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQYYTNRYHDA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P AT HI +   L+Q I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEKLVQEILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172

Query: 168 RK----IDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAM 222
           R     I+E +    + EK   KN ADF LWK+++P     W SPW  G PGWH EC+AM
Sbjct: 173 RNLENVINESRELAGIGEK---KNQADFALWKKASPEHIMRWPSPWSDGFPGWHCECTAM 229

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS 
Sbjct: 230 GRKYLGSHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSL 288

Query: 283 GNFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAE 331
           GNFIT+ +             +P+ IR  +L  HYR  +DF+          ++RL    
Sbjct: 289 GNFITLEQFFTGNHDSLEQAYSPMTIRFFILSAHYRSTVDFSNDALKASQKGLERLMNGL 348

Query: 332 ILLSKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQAL------------HKL- 371
             L + P    S   +   V         A+ +D  T   I  L            HK  
Sbjct: 349 NDLERVPVAKQSDEQVKKFVSELRQRCYDAMNDDFQTQLVISYLFEACHVINTALDHKAN 408

Query: 372 --ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKF 425
             A +  +  D + +F  +  +LG++  K   N     A  K+V   L L       K +
Sbjct: 409 ISAEDLKELSDTMHLF--TFDLLGLKSEKGANNDAREEAYGKVVDMVLNLRAKAKADKDW 466

Query: 426 SSADYIRKQLESKGFILEDYKN 447
           +++D IR  L   GF ++D K+
Sbjct: 467 ATSDQIRDALAEAGFEVKDTKD 488


>gi|260592037|ref|ZP_05857495.1| cysteine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536321|gb|EEX18938.1| cysteine--tRNA ligase [Prevotella veroralis F0319]
          Length = 495

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 179/499 (35%), Positives = 248/499 (49%), Gaps = 67/499 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++  G
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLKHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQYYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD +      +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQIMDNGYAYESNGSIYFDVAKYDKDHHYGVLSGRN 173

Query: 170 IDEQKMGTR----VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           + +    +R    V EK+   N  DF LWKR+ P     W SPW  G PGWH EC+AM  
Sbjct: 174 LTDMINNSRELAGVGEKH---NQVDFALWKRAMPEHIMRWPSPWSNGFPGWHCECTAMGR 230

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GN
Sbjct: 231 KYLGDHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGN 289

Query: 285 FITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE------------ 331
           FIT+ +    K        +P+ IR  +L  HYR  +DF+ + L  AE            
Sbjct: 290 FITLEQFFTGKHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIED 349

Query: 332 ---ILLSKWPQTSTSK---------------GIIDPAVLSALYNDLNTVSAIQALHKLAR 373
              I  S     +T K                ++ PAV+S L+   + V+ +   HK   
Sbjct: 350 SARIQPSDASDDNTKKFVANFRQKCYDAMNDDLMTPAVISNLFEACHLVNVL-IDHKAQI 408

Query: 374 ESTKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSA 428
            +    +L       A  ILG++  +   N     A  K+V   L L       K ++ +
Sbjct: 409 SADDLKELTEAMQLFAFDILGLKNERSANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVS 468

Query: 429 DYIRKQLESKGFILEDYKN 447
           D IR  L   GF ++D K+
Sbjct: 469 DQIRDALADAGFQVKDTKD 487


>gi|57237647|ref|YP_178895.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|121612326|ref|YP_001000491.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005427|ref|ZP_02271185.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|61216114|sp|Q5HUZ0|SYC_CAMJR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200143|sp|A1VZF0|SYC_CAMJJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57166451|gb|AAW35230.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|87249406|gb|EAQ72366.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315058256|gb|ADT72585.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 462

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 163/461 (35%), Positives = 234/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LAQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMTQSGQTLEE------ITEFYIKSYEEDMRALNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +E+ +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNVSK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F++AD IR+QL SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN 453


>gi|163839174|ref|YP_001623579.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|189082074|sp|A9WLY4|SYC_RENSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|162952650|gb|ABY22165.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 493

 Score =  246 bits (628), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 171/498 (34%), Positives = 239/498 (47%), Gaps = 74/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T   ++ +F  +      +Y CG TV    HIG+ R  +VFD L R L++   + 
Sbjct: 3   LRFYDTATAEVRDFAPLVEGKASLYYCGATVQSEPHIGHLRSALVFDQLTRWLQFRGFQT 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A +        +       K  QQF     +L    P ++PR
Sbjct: 63  TV--VRNVTDIDDKILAKAAE------AGEEWWARAYKYEQQFNAAYDKLGITRPDYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT +I +M  LIQ++I  GHAY A   + ++ FD  S   YGS + + ID+ +       
Sbjct: 115 ATGNISEMHSLIQDLIDRGHAYPAPDGSGDVYFDVRSWGKYGSLTHQNIDDMQAAADADP 174

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  KK+  DF LWK   P EP    W SPWG GRPGWH+ECSAM   YLG  FDIHGGGL
Sbjct: 175 R-GKKDARDFALWKGRKPEEPTTASWPSPWGAGRPGWHLECSAMVGKYLGDAFDIHGGGL 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A R    AN W+HNG +  +G KMSKS GN I   EL       
Sbjct: 234 DLRFPHHENEMAQSQAAGR--PFANFWMHNGLVAYQGEKMSKSIGNVIGPGELFAQAS-- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT------------------------VQRLTEAEILL 334
                  V+R  +   HYR  +D++                        VQR+ E E   
Sbjct: 290 -----PRVVRYYLGQAHYRSVLDYSPESLEEAAAALARIDGFLVNAGANVQRV-EVEDSG 343

Query: 335 SKWPQTSTSKGI----------IDPAVLSALYNDLNTVSAIQALHKLAR---ESTKNHDL 381
             +   +  +G              A + A+ +DLN   A+  LH+  R    +  + DL
Sbjct: 344 HMYLPPAAKQGFGWFAYAPLSDTPAAFVEAMDDDLNVPKALAVLHETVRAGNSAIASSDL 403

Query: 382 LPI---FNASAHILGI----EVCKEHLNKNISI-AIEKLVQERLILLKM----KKFSSAD 429
           + +   F A   +L +     +  +    N S  A+E LVQ RL   +     K ++ +D
Sbjct: 404 VELQKKFEAVLAMLDVLGLSSIATDQAADNGSTHALETLVQTRLQERQQARTEKNWARSD 463

Query: 430 YIRKQLESKGFILEDYKN 447
            IR +L   G  +ED  N
Sbjct: 464 EIRDELAEAGIKIEDSSN 481


>gi|148657437|ref|YP_001277642.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148569547|gb|ABQ91692.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 401

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 140/383 (36%), Positives = 206/383 (53%), Gaps = 34/383 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++TL  +  E        + +YVCG T YD  H+G+A   ++FDVL R +R+  G   V
Sbjct: 3   LFDTLRGQKAELLIPRDRPLTLYVCGVTPYDTTHVGHAHTFLIFDVLIRYIRHCGG--TV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y +N TD+DD + ERA ++   IP ++    +  + T+QFVKD   L  + P   P+A+
Sbjct: 61  RYCQNTTDVDDPLFERAARD--GIPWDE----LARRETEQFVKDCRALNLIPPDFFPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG-----TRVPE 181
             I  MI +I+ +I  GHAY  N  + +D S+ P YG+ +R    E+ +         P 
Sbjct: 115 EEIAAMIPIIERLIELGHAYVRNGNVYYDVSTEPTYGAMARVSGYEELLALANERGNNPN 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K +P DF+LW+RS P EP W SPWGRGRPGWHIEC+AM++ YLG   DIHGGG DLI
Sbjct: 175 DPLKDDPLDFVLWQRSRPGEPTWPSPWGRGRPGWHIECTAMATRYLGPQLDIHGGGRDLI 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH +EI Q+          + W+H G   L+G+KMSKS GN + I + L       R 
Sbjct: 235 FPHHPSEIVQTEPYTGKRPFVHFWVHGGLAWLDGQKMSKSLGNLVFIKDAL-------RQ 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------ 349
             A  +R  +L   YR+  ++    + +AE  + +      ++G  DP            
Sbjct: 288 HSADALRWYLLSFPYRDDFEYVRSDVPQAEQKVGQLKAALAAQG--DPRGERLNPEPFRQ 345

Query: 350 AVLSALYNDLNTVSAIQALHKLA 372
           A  +AL +DL+T  A+  +  L+
Sbjct: 346 AYFAALDDDLDTPKALAQISVLS 368


>gi|297619138|ref|YP_003707243.1| cysteinyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378115|gb|ADI36270.1| cysteinyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 559

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 143/420 (34%), Positives = 210/420 (50%), Gaps = 64/420 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN+L   + +F+ ++   ++MY+CGPTVYD +H+G+ R  + FDV+ R L +     
Sbjct: 29  IKVYNSLTNTMEKFRPLEQKAVKMYICGPTVYDSSHLGHGRTYVSFDVIKRYLEH--KGY 86

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII +A+       +      ++ +N   F+KD   L        P+
Sbjct: 87  NVYLVINFTDIDDKIINKAKN------LKVDCKNVSEENIASFLKDMLSLGVEPANVYPK 140

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
            T  I ++I  I  ++   +AY A + + F+      YG  S   +D+ K  ++      
Sbjct: 141 VTQSISEIIDFIGVLVEKDYAYIAKDGVYFNVRKFRQYGRLSNINLDKLKPKSKEAQNNN 200

Query: 179 ---------VPEKYHKKNPADFILWKRSTP-------MEPGWESPWGRGRPGWHIECSAM 222
                      +K  K N  DF LWK + P       +EP W SPWG+GRPGWHIECS M
Sbjct: 201 ENNNENNNENKDKNGKLNVEDFALWKFNEPVFDGDTCIEPAWNSPWGKGRPGWHIECSVM 260

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK-TANIWIHNGFLNLEGRKMSKS 281
           S+ Y G+ FDIHGGG DL FPHHENEIAQS      E      W+H GF+ + G KMSKS
Sbjct: 261 SAKYFGECFDIHGGGKDLAFPHHENEIAQS--DSYFEAPCVKYWMHTGFVRVNGEKMSKS 318

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------- 331
            GNF+TI ++L       + +    +RL  +  HYR P+D++ + L+  +          
Sbjct: 319 LGNFVTIEDML-------KKYDKDTLRLFFIQRHYRSPLDYSDESLSHVKNTLNKFENAI 371

Query: 332 ---ILLSKWPQTSTSKGIIDPAVLSALY-----------NDLNTVSAIQALHKLARESTK 377
              I  SK  +      + D   ++ LY           +D NTV A++ L+ L   + K
Sbjct: 372 KKLIYYSKNSEVKNKLTVNDVEFMNILYTCRNKYYDAMDDDFNTVEAVRVLNSLVGATNK 431


>gi|86153279|ref|ZP_01071483.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843005|gb|EAQ60216.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 462

 Score =  246 bits (627), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 164/461 (35%), Positives = 233/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LAQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSGQTLEE------ITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNVSK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFINNANLELDKESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F+ AD IR+QL SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKSKDFNIADTIREQLSSKKITLLDTPN 453


>gi|325954818|ref|YP_004238478.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437436|gb|ADX67900.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 489

 Score =  246 bits (627), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 168/487 (34%), Positives = 246/487 (50%), Gaps = 52/487 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YN+L  +  +F  I+   + MYVCGPTVY   H+GN R  + FD++YR L    G 
Sbjct: 6   QLKVYNSLSGQKEKFVPINKEFVGMYVCGPTVYSHVHLGNVRTFMSFDMIYRYL-LLLGY 64

Query: 64  KCVTYVRNITDI--------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           K V YVRNITD+        +DKI ++AR E    P+      I  K T  F     +  
Sbjct: 65  K-VRYVRNITDVGHLLDDSDEDKIAKKARLEKVE-PME-----IVQKYTVDFHDVLRKFN 117

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKID 171
              P  +P AT HI + I + + +I  G AYE+N  + FD         NYG  S R I+
Sbjct: 118 NHPPNVEPTATGHIVEQIVITKELIEKGLAYESNGSVYFDVKKYNEKGGNYGELSNRNIE 177

Query: 172 EQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +    TR  + +  K+NP DF LWK++ P     W SPWG G PGWH+EC+ MS+ YLG+
Sbjct: 178 DLMANTRTLDGQDEKRNPQDFALWKKALPDHIMRWPSPWGEGFPGWHLECTVMSTKYLGE 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGG+DL FPHHE EIAQ+  A   ++    W+H   L L G+KMSKS GN I   
Sbjct: 238 QFDIHGGGMDLKFPHHECEIAQAKGA-YGQEPVKYWLHANMLTLNGQKMSKSTGNTILPE 296

Query: 290 ELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           ELL     F  + +   VIR  M+  HYR  +DF+ + +  +E   ++  +   +   I+
Sbjct: 297 ELLSGNNSFFDKGFSPMVIRFFMMQAHYRSILDFSNEAILASEKGYTRLMEAYKTIPSIE 356

Query: 349 PAVLS-------------ALYNDLNT-------VSAIQALHKLARES-TKNHDLLPIFNA 387
           P   S             A+ +D NT         A++ ++ L   + T N + L +   
Sbjct: 357 PNATSTFDVKAFETKLYEAMDDDFNTPILIAHLFDAVKIINSLKEGTETLNTEDLALLQK 416

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM-------KKFSSADYIRKQLESKGF 440
             +   ++V      +  S +  KL     +L++M       K ++ +D IR +L S G 
Sbjct: 417 IMNDFVVKVLGLKEEETSSDSTHKLDGVLQMLIEMRNQARVDKNWTLSDQIRDELSSLGI 476

Query: 441 ILEDYKN 447
            L+D K+
Sbjct: 477 QLKDSKD 483


>gi|288925853|ref|ZP_06419783.1| cysteine--tRNA ligase [Prevotella buccae D17]
 gi|288337277|gb|EFC75633.1| cysteine--tRNA ligase [Prevotella buccae D17]
          Length = 496

 Score =  246 bits (627), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 174/506 (34%), Positives = 247/506 (48%), Gaps = 77/506 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQTLLIYNTLSRSKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      +    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHMEHDADDGDDKIEKKARLEQLE-PME-----VAQYYTNRYHTA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P+AT HI +   L++ I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MNALNVLPPSIEPQATGHIIEQEELVKQILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172

Query: 168 RK----IDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAM 222
           R     ++E +  T V EK H+   ADF LWKR+ P     W SPW  G PGWH EC+AM
Sbjct: 173 RSLENIVNESRSLTGVGEKRHQ---ADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAM 229

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS 
Sbjct: 230 GRKYLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVRYWMHNNMITINGQKMGKSL 288

Query: 283 GNFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAE 331
           GNFIT+ +             +P+ IR  +L  HYR  +DF+          ++RL    
Sbjct: 289 GNFITLEQFFTGSHDSLEQAYSPMTIRFFILSAHYRSTVDFSNDALKASEKGLERLMNGL 348

Query: 332 ILLSKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L + P + T     D  V         A+ +D  T   I  L +        H +  +
Sbjct: 349 SDLDRVPVSDTCDEATDQFVKQLRQRCYDAMNDDFQTQLVISYLFEAC------HVVNTL 402

Query: 385 FNASAHI-------------------LGIEVCKEHLNKNISIAIEKLVQERLILLKM--- 422
            +  AHI                   LG++      N+    A  K+V   L L      
Sbjct: 403 LDHKAHICTDCLKELSETMRLFAFDLLGLKPENGDNNEAREEAYGKVVDMVLSLRSKAKA 462

Query: 423 -KKFSSADYIRKQLESKGFILEDYKN 447
            K ++++D IR  L   GF ++D K+
Sbjct: 463 DKDWTTSDKIRDALADAGFEVKDTKD 488


>gi|163755873|ref|ZP_02162990.1| cysteinyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161324044|gb|EDP95376.1| cysteinyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 494

 Score =  245 bits (626), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 58/493 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++KIYN+L  +   F  I+  ++ MYVCGPTVY   H+GN R  + FD+++R L +  
Sbjct: 6   EQELKIYNSLTNQKEVFTPINEGHVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLNHL- 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD+          +DKI ++AR E    P+      I  + T  F    
Sbjct: 65  GYK-VRYVRNITDVGHLENDAEEGEDKIAKKARLEELE-PME-----IVQRYTIDFHDIL 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRR 168
            +   + P+ +P AT HI + I +++ II +G+ YE N  + FD         YG  S R
Sbjct: 118 QKFNFIPPSIEPTATGHIIEQIEIVKEIIANGYGYEVNGSVYFDVHKFNEKNKYGILSNR 177

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +D+    +R +  +  KKNP DF LWK++       W SPWG G PGWH+EC+AMS+ Y
Sbjct: 178 NLDDLVNNSRELDGQSDKKNPQDFALWKKAEETHIMHWPSPWGEGFPGWHLECTAMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQ--SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           LG+ FDIHGGG+DL FPHHE+EIAQ  +CC        N W+H   L L G+KMSKS  N
Sbjct: 238 LGQKFDIHGGGMDLKFPHHESEIAQNEACCG---TSPVNYWMHANMLTLNGKKMSKSTDN 294

Query: 285 FITINELLETKKFGGRSWPAP-VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
            I   E+   +        AP V R  M+  HYR  +DF+   L  +E   +K  +  T+
Sbjct: 295 NILPGEIFSGESTHLSKGFAPSVARFFMMQAHYRSILDFSNNALLASEKGYNKLMEAMTT 354

Query: 344 KGIIDPA--------------VLSALYNDLNT-------VSAIQALHKLAR-ESTKNHDL 381
              + P                 +AL +D NT         A++ +++L   ++T   + 
Sbjct: 355 LENLKPIGDKTSFNLSVWKRNCYNALNDDFNTPILIADLFEAVKFINQLKDGKATILAES 414

Query: 382 LPIFNASAH-----ILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
           L       H     ILG+E      +    +S  +E L+  R      K F+++D IR +
Sbjct: 415 LAELKKCMHAFVFEILGLEQPNASSDDGDALSGVVELLINMRTEARANKDFATSDKIRDE 474

Query: 435 LESKGFILEDYKN 447
           L + G  L+D K+
Sbjct: 475 LLALGIQLKDGKD 487


>gi|162447013|ref|YP_001620145.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|187629784|sp|A9NEI9|SYC_ACHLI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|161985120|gb|ABX80769.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 434

 Score =  245 bits (626), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 165/463 (35%), Positives = 231/463 (49%), Gaps = 56/463 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGE 63
           +KIYN+L  KI EF+ I    + MYVCGPTVYD  HIGN RP++ FDV+ R L+Y  YG 
Sbjct: 2   LKIYNSLSNKIEEFKPIHEKKVNMYVCGPTVYDDIHIGNGRPVVFFDVVKRYLQYLDYG- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y  NITD+DDKII+RA++ H +         + +  T  F +   ++        P
Sbjct: 61  --VKYASNITDVDDKIIDRAQKLHITE------KELATTYTNNFFEIAKKIGGYNFDVTP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            ATN+I +MI  I  +I  G AY+  + + F    I +YG  S +++ + K G R+  + 
Sbjct: 113 HATNYIEEMIKFIGELISDGFAYKTQSGVYFRVDKIKDYGILSNQQVKDLKTGVRIDLET 172

Query: 184 HKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+   DF LWK +   E G  + +PWG GRPGWH EC  M++   G   DIHGGG DL 
Sbjct: 173 DKEKDYDFALWKNT---EEGIKYHAPWGDGRPGWHTECVVMTNEIFGGEIDIHGGGFDLK 229

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+H G L+L   KMSKS GN I + +L++        
Sbjct: 230 FPHHENEIAQS-VAKHDHHLAKYWMHVGRLDLANEKMSKSLGNDIKLKDLVQV------- 281

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWP----QTSTSKGIIDPA 350
           +     RL +L  HYR PI F+   + + +         L+KW       + ++  +D  
Sbjct: 282 YNPNAYRLMLLAHHYRAPIQFSDDLIEQYQKAYDKISYTLNKWHFHMILNNINENGLDHE 341

Query: 351 VL----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE-HLNKNI 405
            +      + +D  T   I  + KL +      DL   F    +   I++     +N NI
Sbjct: 342 SMEYFEGFMNDDFATPRVISLIDKLIK------DLNKAFKVENYNTIIQILSTLGINPNI 395

Query: 406 SIAIEKLVQE-------RLILLKMKKFSSADYIRKQLESKGFI 441
              +E  +Q        RL     K +  AD  RK L  KGFI
Sbjct: 396 LEVLEDDIQNYNNWQQARL----EKNYEKADIYRKPLLDKGFI 434


>gi|317126032|ref|YP_004100144.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315590120|gb|ADU49417.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 492

 Score =  245 bits (626), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 148/483 (30%), Positives = 233/483 (48%), Gaps = 59/483 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +++T  R++  F   +   + MY+CG T     HIG+ R  + FDVL R L   + +
Sbjct: 2   SLHLFDTATRELRAFVPRESGKVGMYICGLTTQGAPHIGHIRFAVAFDVLRRWLETAH-D 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT +RN+TDIDDK++ +A          +    +T +N +        L     T++P
Sbjct: 61  YHVTLIRNVTDIDDKVLRKAAD------AGEDWFALTYRNERLTTDALDALGVKPATYEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           RAT H+P M+ L++ +I  GHAY A   + ++ FD  S P+YGS S + +D+  +     
Sbjct: 115 RATGHVPDMVALMETLIEKGHAYAAPDGSGDVYFDVRSWPDYGSLSNQSLDDM-VAAEDA 173

Query: 181 EKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +   K++P DF LWK      P+   W +P+G GRPGWH+ECSAM+  +LG  FDIHGGG
Sbjct: 174 DPRGKRDPRDFALWKGRKSDEPLSASWPTPFGSGRPGWHLECSAMARRWLGDEFDIHGGG 233

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHHENE AQS  A      A  W+HN ++ ++G KM KS GN + +  LLE  + 
Sbjct: 234 IDLRFPHHENEQAQSRAAGL--GFARYWLHNAWVTVKGEKMGKSLGNALEVRHLLEHTR- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTS 341
                   V+R  +   HYR  I++    L EA   + +                    +
Sbjct: 291 ------PLVLRYYLTAAHYRSTIEYHSGSLDEAAAAVERIEGFLERAARRGEITSPTDAA 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHIL 392
            ++ ++ P  + A+ +DL    A+ A+H   R                      A   +L
Sbjct: 345 AARAVLPPEFVEAMDDDLGVSGALAAVHDTVRAGNVALEEGDDDAALAAAVRVVAMTDVL 404

Query: 393 GI-------EVCKEHLNKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFI 441
           GI          ++     + +A++ LV    +ER    + + F+ AD IR +L + G  
Sbjct: 405 GINPLAPNWATSQDATTTAVEVALDALVRARLEERQSARQERDFARADAIRDELAAVGVA 464

Query: 442 LED 444
           + D
Sbjct: 465 ITD 467


>gi|158312230|ref|YP_001504738.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158107635|gb|ABW09832.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 506

 Score =  245 bits (626), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 162/520 (31%), Positives = 235/520 (45%), Gaps = 91/520 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R++  F  + P ++ +YVCGPTV    H+G+ R  + FD+L R L       
Sbjct: 3   LHLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTALAFDLLRRWL--TQSGL 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TDIDDKII  A +   S+        + ++ T+ F      +  L PT  PR
Sbjct: 61  SVTFVQNVTDIDDKIIVNADRAGTSV------WELATRQTRAFEDAYRAVGILPPTISPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+M+ +I  ++  G AY     + F   +  +YG+ S ++     M      +  
Sbjct: 115 ATGHIPEMLEMIAVLVERGFAYPGAGSVWFRVGAFADYGALSHQR--PAAMHPSPESEPG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK   P EP W SPWG GRPGWH+ECSAM   YLG VFDIHGGGLDL+FPH
Sbjct: 173 KADPRDFALWKAVKPGEPSWSSPWGPGRPGWHLECSAMVGKYLGDVFDIHGGGLDLVFPH 232

Query: 245 HENEIAQSCC----------------------------ADRIEKTANIWIHNGFLNLEGR 276
           HENE AQS C                            A    + A  W+H G L   G 
Sbjct: 233 HENERAQSVCAAELAAAGAAPAAASSRGAVAAGADVPGAGGAGEMARYWMHVGLLTTGGT 292

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA------ 330
           KMSKS GN   + + L   +         V+R  +L  HYR  ++++ Q L E+      
Sbjct: 293 KMSKSLGNSFFVTDALAAVR-------PQVLRYHLLSAHYRSSLEYSAQTLEESAAAHDR 345

Query: 331 ---------EILLSKWPQ----------TSTSKGIIDPA---VLSALYNDLNTVSAIQAL 368
                    +IL                  T     D A     +AL +DL    A+ AL
Sbjct: 346 IETFVRNALDILGGPAEAAALAAEADRVAGTEAADADGAWSEFAAALDDDLGVGRALAAL 405

Query: 369 HKLARES----TKNHD-----LLPIFNASAHILGIEVCKE------HLNKNISIAIEKLV 413
             +        +K H       + +      +LG++  ++       L   +   ++ L+
Sbjct: 406 FGVVGRGNQVLSKTHSRELAGWVDVARRMLTVLGLDPVEQWPTAGAELRPALDGVMDVLL 465

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             R      + +S AD IR +L + G ++ED      GQR
Sbjct: 466 DLRSAARARRDYSEADSIRSRLAAAGVVIEDTP---EGQR 502


>gi|6599474|gb|AAF18749.1|AF162864_1 cysteinyl-tRNA synthetase [Rhodothermus marinus]
          Length = 504

 Score =  245 bits (626), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 152/398 (38%), Positives = 206/398 (51%), Gaps = 38/398 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++YNTL R I     ++ + +R+Y CGPTVY +AHIGN R  +  D++ R+ +   G
Sbjct: 6   KTLRLYNTLTRSIEPIYPLERNPLRLYACGPTVYTYAHIGNFRSFLTADLIVRVAQAL-G 64

Query: 63  EKCVTYVRNITDI-------------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
            + V YV N+TD+              DK+    R E      N  I  +    TQ F++
Sbjct: 65  WQTV-YVCNVTDVGHLTVDDYADASGQDKLERALRSEEGRRFPN--IWDLARYYTQAFLE 121

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           D   L  + P  +PRAT HI Q I  I+ ++  GHAYE    + F   S P+YG  S  +
Sbjct: 122 DWQTLKLVEPDVRPRATEHIRQQILAIEQLVKTGHAYETRQGVYFHVPSFPDYGKLSGNR 181

Query: 170 IDEQ--KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
             EQ  +    V +   K++P DF LWK+       W SPWG G PGWHIECS MS  YL
Sbjct: 182 DPEQLARAVRDVVQDPEKRDPRDFALWKKDEKHLMQWYSPWGWGFPGWHIECSVMSMEYL 241

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FD+H GG DLIFPHHE EIAQ+      +  A  W+H  FL +EG KMSKS GNF T
Sbjct: 242 GETFDLHLGGEDLIFPHHECEIAQAESLTG-KPLARYWVHTRFLLVEGEKMSKSKGNFFT 300

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           + EL+   + GG+      +R A++   YREP++FT          VQR  EA   +   
Sbjct: 301 VRELIFPPEAGGQGIDPMALRYALISGKYREPLNFTRKHLRDSIRIVQRYQEAARHVEAA 360

Query: 338 PQTSTSK--------GIIDPAVLSALYNDLNTVSAIQA 367
            ++  S           I    L AL +DLNT  A+ A
Sbjct: 361 LESDRSGPDRLGDRLSTIYDKTLEALCDDLNTPVALAA 398


>gi|169350895|ref|ZP_02867833.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
 gi|169292481|gb|EDS74614.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
          Length = 460

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 169/471 (35%), Positives = 249/471 (52%), Gaps = 60/471 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  K  EF+ +    + +YVCGPTVY++ HIGN RPMIVFDVL R    Y G K
Sbjct: 16  MRLFNTLTNKKEEFKPLRDGEVSIYVCGPTVYNYVHIGNTRPMIVFDVLRRTFE-YLGYK 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK---DTTR-LACLAPT 120
            V +V N TD+DDKII+ A+QE           I   + T +++K   D  R L  L PT
Sbjct: 75  -VIFVSNFTDVDDKIIKAAKQE----------GISEKELTDKYIKAYEDVRRDLNLLFPT 123

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           + PR TN +  +I  I +++  G+AYE + ++ F  S I  YG  S  KI++   G   R
Sbjct: 124 YAPRVTNTMEAIISFIDDLVKTGYAYEVDGDVYFRVSKIEEYGQLSGIKIEDLVAGASER 183

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVFDIHGG 236
           V E   K+   DF LWK+ T     ++SPW +GRPGWH EC  M +     GK+ DIHGG
Sbjct: 184 VDENNKKEESTDFALWKK-TDEGIRFDSPWSKGRPGWHTECVVMINDIFQDGKI-DIHGG 241

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENEIAQS         A+ W+HN  +N++ +KMSKS GN I   +++    
Sbjct: 242 GQDLKFPHHENEIAQSMACHH-HPIAHTWMHNQMINIDNQKMSKSLGNVIWAKDMI---- 296

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKG- 345
                    V +  ML +HYR P++ T          V ++      +S + Q +   G 
Sbjct: 297 ---NDLGCNVYKWFMLSSHYRNPLNLTDAVLNNVKKEVAKVDNVVKTVSLYLQVNGLDGN 353

Query: 346 -----IIDPAVLSALYNDLNT-------VSAIQALHKLARESTKNHD-LLPIFNASAHIL 392
                 +D  V  AL +DLNT       ++ ++ L++L R   K+ + +L  +N    ++
Sbjct: 354 EYCKETVDVMV-DALEDDLNTSLALTQILNQVKVLNQLMRVKEKDDESILMNYNTLMKMV 412

Query: 393 GI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            +   V + H    +S+   +L ++ L   ++K F  AD +R +L SKG I
Sbjct: 413 TVIGFVYQPH---QLSLDELELYKKWLEAKEVKNFDVADKLRSELISKGII 460


>gi|291296187|ref|YP_003507585.1| cysteinyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471146|gb|ADD28565.1| cysteinyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 481

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 180/488 (36%), Positives = 249/488 (51%), Gaps = 64/488 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL+R+   F    P  + +YVCGPTVY   H+G+AR  IV+DVL R LRY  G K
Sbjct: 3   LQIYNTLKRQKEPFVPATPGYVGIYVCGPTVYSDPHLGHARGPIVYDVLRRWLRYQ-GYK 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V +V NITD+          +DKI+ RA+ E    P+      +  K    +  +   L
Sbjct: 62  -VRFVSNITDVGHLTDDADQGEDKILRRAKLERLE-PME-----VAEKYMWSYFDEMQAL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P   PRA  HIP+ I L + ++  GHAY  N  + F   S P +G  S R I+EQ+
Sbjct: 115 NVLRPDITPRAAGHIPEQIELTEALLERGHAYVVNGSVYFRVKSWPAFGKLSNRDIEEQE 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G RV  +  K++P DF LWKR+ P     W SPWG G PGWHIECSAMS  YLG  FDI
Sbjct: 175 AGARVEVREEKEDPRDFALWKRAEPEHIMRWNSPWGEGFPGWHIECSAMSLKYLGDGFDI 234

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DL FPHHE EIAQ+  A      A  W+H+  + L G+KM+KS GN IT+ EL  
Sbjct: 235 HAGGVDLQFPHHEAEIAQAEAAG--HPFARYWMHHYHVLLNGQKMAKSTGNLITLAEL-- 290

Query: 294 TKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQT-------- 340
                 R+   P+ IR  +L +HYR  +DFT + L  A+     LL+ + +         
Sbjct: 291 ------RARYEPMYIRFYLLNSHYRSVLDFTDEGLEAAKNGYLRLLNAYREVRRLLHNAP 344

Query: 341 STSKGIIDPAV-------LSALYNDLNTVSAIQALHKLARESTKNHDLLP---------- 383
           +     +D A+        +AL +DLNT  AI A      E  K     P          
Sbjct: 345 AGRHAGLDRAIENLRKDFANALNDDLNTAQAIAAFFNFVTELNKALTERPGRESLQAAEQ 404

Query: 384 IF-NASAHILGI---EVCKEHLNKNISIAIEKLVQE-RLILLKMKKFSSADYIRKQLESK 438
           +F      +LG+    V +  L   +   +  L+ E R    + + F+ +D IR++L   
Sbjct: 405 VFAELGEGVLGLFPARVLEHQLGGALLDGLVNLLLEIREEARRNRNFALSDRIRERLIEL 464

Query: 439 GFILEDYK 446
           G ++ED +
Sbjct: 465 GVVVEDTR 472


>gi|268610792|ref|ZP_06144519.1| cysteinyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
 gi|268611696|ref|ZP_06145423.1| cysteinyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 473

 Score =  245 bits (625), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 170/472 (36%), Positives = 237/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L  K  EF   +   + MY CGPTVY +AHIGN R  I+ D+L + LRY   +  V
Sbjct: 3   LYNSLSHKKEEFIPHEEGKVSMYTCGPTVYHYAHIGNLRSYIMEDILEKYLRYTGYD--V 60

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             V NITD+          DDK+++ A++EH ++        I    T  F  D  +L  
Sbjct: 61  KRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKFYTDAFFDDCKKLNI 114

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P     AT +I + I +I +++  G+AYEA   I FDTS +  Y  F+    ++  +G
Sbjct: 115 KTPDVVVPATTYIDEFIRVISSLMEKGYAYEAGGNIYFDTSKLDKYYVFNDFNEEDLAVG 174

Query: 177 TR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            R  V    +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S   LG+  
Sbjct: 175 VRDGVEADENKRNKADFVLWFTKSKFDDQELKWDSPWGIGYPGWHIECSCISMKNLGEYL 234

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D  FPHH NEIAQS  A    K  N W H   LN    KMSKS G F+T++ L
Sbjct: 235 DIHCGGIDNAFPHHTNEIAQS-EAYLGHKWCNYWFHILHLNTNDGKMSKSKGEFLTVS-L 292

Query: 292 LETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKG 345
           LE K +       PVI R   L +HYR+ + F+   L  A+    K      P T  S G
Sbjct: 293 LEEKGY------KPVIYRFFCLQSHYRKSLVFSWDNLDNAKAAYGKLIEKIAPLTQESGG 346

Query: 346 II--------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC 397
            I        D A   AL +D+NT  AI  L+ + +        L + N    +LG+++ 
Sbjct: 347 DIDKAEYERLDKAFREALDSDVNTAMAITVLYDVLKSKANAATKLALINDFDKVLGLDLV 406

Query: 398 -------KEHLNKNISIAIE--KLVQERLILLKMKKFSSADYIRKQLESKGF 440
                  +E  N +  I  E  +LV++R    K K F+ AD +R ++ S G+
Sbjct: 407 ANAKLFLEESANASADIPAEVMELVEQRKEARKAKDFALADELRDKIASLGY 458


>gi|86152065|ref|ZP_01070277.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85840850|gb|EAQ58100.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 462

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 163/461 (35%), Positives = 233/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LAQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSGQTLEE------ITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE  Q  C  +  K
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEATQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F++AD IR+QL SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN 453


>gi|256824257|ref|YP_003148217.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256687650|gb|ACV05452.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 500

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/337 (39%), Positives = 197/337 (58%), Gaps = 33/337 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++++  R++ +F    P    +Y+CG T     HIG+ R  + FDVL R +   +G +
Sbjct: 3   LRLHDSATREVRDFVPRVPGRASIYICGLTTQTSPHIGHLRFAVAFDVLRRWMERGHGLE 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR----LACLAPT 120
            VT VRN+TDIDDKI+ ++  EH         S+  ++ +Q++ ++T+     +    P+
Sbjct: 63  -VTLVRNVTDIDDKILAKS-AEH---------SVAWNEWSQRYERETSAALETIGVRPPS 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT H+P MI L++ +I  GHAY A++   ++ FD  S P YG  +R+ ID+    T
Sbjct: 112 YEPRATGHVPDMIELMERLIERGHAYPADDGSGDVYFDVRSWPAYGELTRQSIDDMTPAT 171

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
              +   K++P DF LWK +   EP    W +PWGRGRPGWH+ECSAM+  +LG+ FDIH
Sbjct: 172 DA-DPRGKRDPRDFALWKGAKADEPHTATWPTPWGRGRPGWHLECSAMAWRWLGEEFDIH 230

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHENE AQS  A       N W+HNG L   G KMSKS GN +T+ EL + 
Sbjct: 231 GGGNDLRFPHHENEQAQSRAAGF--GFTNFWLHNGMLTTGGEKMSKSIGNTLTVQELTKI 288

Query: 295 KKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEA 330
            +        P+ +R  +   HYR  +++T   L EA
Sbjct: 289 YR--------PLAVRWLLATVHYRSALEYTPTSLDEA 317


>gi|326798885|ref|YP_004316704.1| cysteinyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549649|gb|ADZ78034.1| cysteinyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 487

 Score =  244 bits (624), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 171/489 (34%), Positives = 244/489 (49%), Gaps = 53/489 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + IYNTL RK   F+ I+P  + +YVCGPTVY   H+GN R  + FD++YR L  Y
Sbjct: 1   MSSNLVIYNTLSRKKEIFEPINPPMVGLYVCGPTVYSDVHLGNCRTFVSFDLIYRYL-LY 59

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           DDK  ++A+ E    P+      I  K T  F  D
Sbjct: 60  SGYK-VRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE-PME-----IVQKYTIGF-HD 111

Query: 111 TTRL-ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFS 166
             RL   L P+ +P AT HI + I +++ II +G+AYE N  + FD    S   +Y   +
Sbjct: 112 VLRLFNTLPPSIEPTATGHISEQIEMVKQIIANGYAYEVNGTVYFDVEKYSKNNDYTILT 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R++++    TR +  +  KK   DF LW ++ P     W SPWG G PGWHIECSAMS+
Sbjct: 172 NRQLEDMLNNTRELGGQDEKKGRLDFALWIKAKPEHIMRWPSPWGVGFPGWHIECSAMSN 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL   HH NEIAQS   +     A  W+H   L + G +MSKS GN
Sbjct: 232 KYLGHQFDIHGGGMDLAATHHTNEIAQSQACNHT-NPAKYWMHTNMLTVNGARMSKSAGN 290

Query: 285 FITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
                EL         R +    +R  ML  HYR  +DF+           +RL  A  L
Sbjct: 291 GFLPRELFTGDHPLLTRGYSPMSVRFFMLQAHYRSTLDFSNEALEASDKGYRRLMNAIAL 350

Query: 334 LSKWPQTSTSK---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA- 389
           L K   +++S+     I    ++A+ +D N+   I  L ++ R     +D     +A   
Sbjct: 351 LPKLKASASSEVDFEEIKQRFIAAMNDDFNSPVLIAELFEVVRIINSVYDNKTKIDAKGL 410

Query: 390 ------------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                       +ILG++  +   N ++   ++ +++ R      K ++++D IR  L+ 
Sbjct: 411 AQLNTLVNDFVFNILGLKDDQTENNGDLEKLMDFIIKLRQEAKASKDYATSDLIRNSLQE 470

Query: 438 KGFILEDYK 446
            GF L+D K
Sbjct: 471 MGFQLKDSK 479


>gi|153951726|ref|YP_001398277.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166200142|sp|A7H447|SYC_CAMJD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152939172|gb|ABS43913.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 462

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 165/468 (35%), Positives = 236/468 (50%), Gaps = 55/468 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LANGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSCQTLEE------ITEFYIKSYEEDMRTLNVLDPDFKPRATHYIIAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSSRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K  +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKIYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISNANLELDKESKNKILKQNIKEALSELAKIFGFGFMDATLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
             IEKL+ ER    K K F++AD IR+QL SK   L D  N    ++M
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIREQLSSKKITLLDTPNGTIWEKM 460


>gi|157415073|ref|YP_001482329.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047114|sp|A8FLL5|SYC_CAMJ8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157386037|gb|ABV52352.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747715|gb|ADN90985.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932527|gb|EFV11462.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 462

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 163/461 (35%), Positives = 234/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LANGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSGQTLEE------ITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +L +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +ES       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F++AD IR++L SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIRERLSSKKITLLDTPN 453


>gi|299142423|ref|ZP_07035555.1| cysteine--tRNA ligase [Prevotella oris C735]
 gi|298576145|gb|EFI48019.1| cysteine--tRNA ligase [Prevotella oris C735]
          Length = 496

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 176/499 (35%), Positives = 251/499 (50%), Gaps = 63/499 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R+   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQNLIIYNTLTRQKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQYYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKEILKNGYAYESNGSIYFDVEKYDKEHKYGILSG 172

Query: 168 RKIDEQKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R + +    +R  +    KKN  DF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLTDMINNSRELQGVGEKKNQVDFALWKKAQPEHIMRWPSPWSVGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGSHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
           IT+ +          +++    IR  +L  HYR  +DF+           +RL  A   L
Sbjct: 292 ITLEQFFTGNHESLTQAYTPMTIRFFILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDL 351

Query: 335 SKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQAL------------HK--LAR 373
            + P +S      D  V         A+ +DL T   I  L            HK  +  
Sbjct: 352 ERVPVSSHCDAETDKFVKAFRQRCYEAMNDDLQTPLVISYLFEACHLINTLLDHKAEICA 411

Query: 374 ESTKN-HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSSA 428
           +  K   D+L +F  +  +LG++  K   N     A  K+V   L L       K ++++
Sbjct: 412 DCLKELSDVLKLF--AFDLLGLQSEKGANNVAREEAYGKVVDMVLDLRAKAKADKDWTTS 469

Query: 429 DYIRKQLESKGFILEDYKN 447
           D IR  L + GF ++D K+
Sbjct: 470 DKIRDALAAAGFEVKDTKD 488


>gi|283954375|ref|ZP_06371896.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794174|gb|EFC32922.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 463

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 169/480 (35%), Positives = 241/480 (50%), Gaps = 57/480 (11%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           L+  I E   +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + R
Sbjct: 4   LDSVIKEKIKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LANGNR-VKFAR 61

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TDIDDKI+++  +   S+        IT    + + +D   L  L P  +PRAT++I 
Sbjct: 62  NYTDIDDKILKKMAKSGQSLEE------ITEFYIKSYEEDMKALNVLDPDFKPRATHYIA 115

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            M+ LI+ +      Y   + I FDTS    Y S S R ++E    +R+  +  K+N +D
Sbjct: 116 AMLDLIKKLAKGEFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESD 173

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE A
Sbjct: 174 FVLWKFD---ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAA 230

Query: 251 QS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           Q  C   RI   ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R 
Sbjct: 231 QCRCGCKRI--LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRF 281

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVL 352
            +L +HYR   ++++  L  ++  L K+ +                     K  I   +L
Sbjct: 282 YLLSSHYRSHFNYSLSDLENSKKRLDKFYRLKKRVELSEISDFDVLNNIEIKSEIAKQIL 341

Query: 353 SALYNDLNTVSAIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL 401
            AL +DLN   A+  L         +L +ES       ++    +  A I G       L
Sbjct: 342 KALNDDLNISKALALLDDFISNANLELDKESKNKFLKQNIKEALSELAKIFGFGFMDTTL 401

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +K     IE L+ ER    K K FS+AD IR+QL SK  IL D  N    ++M 
Sbjct: 402 YFQWGVSKEEQEEIEGLILERTEAKKNKDFSTADAIREQLSSKKIILLDTPNGTIWEKMN 461


>gi|260910729|ref|ZP_05917387.1| cysteine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635145|gb|EEX53177.1| cysteine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 536

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 144/363 (39%), Positives = 197/363 (54%), Gaps = 25/363 (6%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F+ +   N+ MYVCGPTVY   H+G+ARP I FDV++R L++  G K V
Sbjct: 47  IYNTLTRQKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVVFRYLQHL-GYK-V 104

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            YVRNITD+          DDKI ++AR E    P+      I    T  +      L  
Sbjct: 105 RYVRNITDVGHLEHDADDGDDKIAKKARLEQLE-PME-----IAQHYTNTYHAAMQLLNV 158

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS---SIPNYGSFSRRKIDEQ 173
           L P+ +P+A+ HI +   L++ I  +G AYE+N  I FD +       YG  S R +++ 
Sbjct: 159 LPPSIEPQASGHIIEQEELVKKIFANGFAYESNGSIYFDIAKYNQTHRYGILSGRNLEDV 218

Query: 174 KMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              +R  +    K+N ADF LWK + P     W SPWG G PGWH EC+AM   YLG  F
Sbjct: 219 LDASRQLDGVGEKRNQADFALWKHAQPEHIMRWPSPWGEGFPGWHCECTAMGRKYLGNQF 278

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQ+  ++  E+    W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 279 DIHGGGMDLVFPHHECEIAQAVASEG-EQMVRYWMHNNMITINGQKMGKSLGNFITLEQF 337

Query: 292 LETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                       +P+ IR  +L  HYR  +DF+ + L  +E  L +          I PA
Sbjct: 338 FNGSHSALEKAYSPMTIRFFILSAHYRGTVDFSNEALQASEKGLERLLNGIADLQRIQPA 397

Query: 351 VLS 353
             S
Sbjct: 398 KAS 400


>gi|319442435|ref|ZP_07991591.1| cysteinyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 474

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 151/488 (30%), Positives = 246/488 (50%), Gaps = 68/488 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R++ +F  +   +  +Y+CG TV    HIG+ R  + FD+L    R +   K
Sbjct: 3   LRIFDTATRELRDFVPLQEGHASVYLCGATVQSIPHIGHVRSGVAFDIL----RNWLAAK 58

Query: 65  C--VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN+TDIDDKI+ ++ +       N       + + + F +    L    P+ +
Sbjct: 59  GLDVAFVRNVTDIDDKILAKSAEN------NRPWWEWAATHERAFTRAYDLLGVTPPSIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIF-DTSSIPNYGSFSRRKIDEQKMG-TRVP 180
           PRAT H+P+MI  I+ II +G  Y   +  ++  T+ +P+YG  S +K+DE   G   VP
Sbjct: 113 PRATGHVPEMIAYIRRIIDNGLGYATEDGSVYCRTAQVPDYGFLSHQKLDELDQGEDAVP 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF +WK + P EPGWE+PWG GRPGWHIECSAMS+ YLG  FDIH GG+DL
Sbjct: 173 ---GKEDPRDFAMWKAAKPGEPGWETPWGFGRPGWHIECSAMSNKYLGGAFDIHAGGMDL 229

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQ+  A   +  AN W+HNG++ + G KMSKS GN +++  +L   +    
Sbjct: 230 QFPHHENEAAQAHAA--GDAFANHWMHNGWVTMSGEKMSKSLGNVLSVPNVLTKVR---- 283

Query: 301 SWPAPV-IRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIID---- 348
               P+ +R  +   HYR  ++++ + L +A       E  L +  +   ++ ++     
Sbjct: 284 ----PIELRWYLGSAHYRSMLEYSEKALQDAAAGFRKIEKFLDRAVELLGAEAVVAGAWR 339

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE---- 395
           PA   AL +DL   +A+  +    RE     D         +     A   +LG++    
Sbjct: 340 PAFEEALDDDLGVPTALAVIQDAVREGNAALDAGDTAAVQRIAGEVRAMMGVLGVDPLSD 399

Query: 396 ----------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                              +     + + ++  ++ R      K +++AD +R +L+  G
Sbjct: 400 TWAGEDSKGRGQGIGAGASDEAIGALDVLVKAELERRATARAEKDWATADAVRDRLKDAG 459

Query: 440 FILEDYKN 447
             + D  +
Sbjct: 460 IAVADSAD 467


>gi|290958497|ref|YP_003489679.1| cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260648023|emb|CBG71131.1| putative cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 482

 Score =  244 bits (622), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 170/480 (35%), Positives = 238/480 (49%), Gaps = 55/480 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +++ + +Y+TL R  T F   + S +RMYVCGPTVY   HIGN R  +  D+  R+L + 
Sbjct: 10  LRQSLSLYSTLSRTSTHFTPAEDSAVRMYVCGPTVYSAPHIGNMRTYLFADIARRVLGF- 68

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
                V    NITD+          DDK+ + A               +  K T+ F+ D
Sbjct: 69  -AGYSVQAAMNITDVGHLTSDADSGDDKMAKAAAA------ERATAWEVAEKYTEIFLAD 121

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
             RL  L      RAT HIPQ I LIQ +   G  Y  N+ + FDTS +P+YG  +    
Sbjct: 122 AGRLNILPMDLVLRATQHIPQQIALIQRLEDKGVVYRTNDGMYFDTSFVPDYGKLTPNDT 181

Query: 171 DEQ-KMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSH 225
            E  + G RV     K++  DF LWK S P  P     W SPWG G PGWHIECSAM+  
Sbjct: 182 REHLRAGERVAMG-EKRHATDFALWKFSPPEAPKRDMEWPSPWGVGFPGWHIECSAMAME 240

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGN 284
           YLG+  D+H GG+D I  HH NEIAQS  A  +   +  W+H  FL LEG R+M KS GN
Sbjct: 241 YLGESLDLHLGGIDHIPVHHTNEIAQSETATGV-PFSRWWMHGAFLTLEGERRMGKSEGN 299

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------W 337
            IT++ L+E        +     R  +L++HYR P+ F+   L +A   L +       W
Sbjct: 300 KITLDTLVE------EGFDPLEFRYLVLLSHYRSPLSFSPTALEQAANALRRLRHRVAAW 353

Query: 338 PQTSTSKGIIDPAV---------LSALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNA 387
            + S   G   P           + AL  DLN   A+  L +LAR+    +   L +  A
Sbjct: 354 -KKSVGAGAELPDCPDSPYLTRFVEALAEDLNMPRAVAELWQLARDPDVDDATKLSLILA 412

Query: 388 SAHILGIEVCKEHLNK---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +LG+++  E  +K    I  A+ +L QER  L   K+F  +D +R Q+ + G+ ++D
Sbjct: 413 FDEVLGLDL--ESASKEPAEIPDAVVRLAQERWELRSAKQFEESDKLRAQILAAGYNVQD 470


>gi|225011916|ref|ZP_03702354.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004419|gb|EEG42391.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 492

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 167/487 (34%), Positives = 250/487 (51%), Gaps = 66/487 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +YN+L  K   F++I P+++ MYVCGPTVY   H+GN R  I FD+++R L++ 
Sbjct: 1   MDSTLVLYNSLNGKKETFKSILPNHVGMYVCGPTVYSNVHLGNCRTFISFDLIFRYLQHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +D+I ++AR E    P+      +  + T  F   
Sbjct: 61  -GYK-VRYVRNITDAGHLENDADEGEDRIAKKARLESIE-PME-----VVQRYTVDFRDT 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFS 166
             +   L P+ +P AT HI + I LI+ II  G+AYE N  + FD       IP YG  S
Sbjct: 113 MAQFNALVPSIEPTATGHIVEQIELIKEIIEQGYAYEVNGSVYFDVIKFNKDIP-YGKLS 171

Query: 167 RRKIDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R I++    TR  + +  KKNP DF LWK++ P+    W SPW  G PGWH+EC+AMS+
Sbjct: 172 GRNIEDLIHNTRTLDGQSDKKNPQDFALWKKAEPVHIMRWPSPWSEGFPGWHLECTAMST 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA--NIWIHNGFLNLEGRKMSKSN 282
            YLG  FDIHGGG+DL FPHHE EIAQ   A+ I K +  N W+H   L L G+KM+KS 
Sbjct: 232 KYLGSQFDIHGGGMDLKFPHHECEIAQ---AESIHKKSPVNYWLHANMLTLNGKKMAKST 288

Query: 283 GNFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTE-- 329
           GN I   E+   +    +   +P+ +R  +L  HYR  +D +           QRL +  
Sbjct: 289 GNNILPGEMFSGENSIFKKAFSPMTVRFFILQAHYRSIVDLSESALEASEKGFQRLIDGI 348

Query: 330 ------------AEILLSKWPQ---TSTSKGIIDPAVLSALYNDLNTVSAIQ-ALHKLAR 373
                       ++  L KW      + +     P +++ L++ +  ++A+   L ++ +
Sbjct: 349 SKLERLPIGDKTSDFDLVKWKNKCYAAMNDDFNSPLLIAHLFDAVKYINAVDNGLQQINK 408

Query: 374 ESTKNHDLLPIFNA-SAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
           +  K  DL  + N     +LG+    +  KE+    +  A+  +++ R      K F ++
Sbjct: 409 DDLK--DLSKLINDFFFDVLGLLNEDDNNKENGGVQLDGALNLILELRNKARASKDFETS 466

Query: 429 DYIRKQL 435
           D IR  L
Sbjct: 467 DLIRDSL 473


>gi|255530399|ref|YP_003090771.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255343383|gb|ACU02709.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 486

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 173/490 (35%), Positives = 242/490 (49%), Gaps = 56/490 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K + +YNTL R    F+ +   N+ MYVCGPTVY   H+GN R  I FD+++R L+Y 
Sbjct: 1   MDKGLHLYNTLTRTKELFEPLHAPNVGMYVCGPTVYSDVHLGNCRTFISFDLIFRYLKYS 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           DDK  +RA+ E    P+      I  K T  F   
Sbjct: 61  -GYK-VRYVRNITDAGHLEGDRDEGDDKFAKRAKLEQLE-PME-----IVQKYTLGFHDV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
                 L P+ +P AT HI + I +I+ I+ +G+AYEAN  + FD    S+  NY   + 
Sbjct: 113 LRMFNTLPPSIEPTATGHIIEQIEMIKVIMDNGYAYEANGTVYFDVEKYSASYNYTILTN 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +++    TR +  +  K+   DF LW ++ P     W SPWG G PGWHIECSAMS+ 
Sbjct: 173 RNLEDMLANTRELGGQDEKRGRLDFALWIKAKPETIMRWPSPWGIGFPGWHIECSAMSAK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL   HH NEIAQS   +  ++ A  W+H   L + G +MSKS GN 
Sbjct: 233 YLGEEFDIHGGGMDLAATHHTNEIAQSEACNH-KQPAKYWMHTNMLTVNGARMSKSAGNG 291

Query: 286 ITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
               EL         R +    ++  ML  HYR  +DF+           +RL  A  LL
Sbjct: 292 FLPGELFTGDHPLLDRGYSPMTVKFFMLQAHYRSTLDFSNEALDASEKGFRRLMNAVTLL 351

Query: 335 SKWPQTSTSKGIIDPAV---LSALYNDLNTVSAIQALHKLAR---------------EST 376
            K    + S   IDP     + A+ +D N+   I  L +  R               E  
Sbjct: 352 DKLVPAAESDFEIDPIASNCIRAMNDDFNSPVVIAELFEATRIINIVYDGKGKISVAELG 411

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
           K   L+  F     I G++  +E  N  ++  +E ++  R    + K ++++D IR  L+
Sbjct: 412 KLKKLVKDF--VFDIFGLK-DEEASNTELNDVLEMMIDIRKAAKENKDYATSDKIRVGLQ 468

Query: 437 SKGFILEDYK 446
           S G  L+D K
Sbjct: 469 SMGIQLKDSK 478


>gi|332879668|ref|ZP_08447361.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682385|gb|EGJ55289.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 502

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 166/494 (33%), Positives = 247/494 (50%), Gaps = 56/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 11  MKHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRALKFL 70

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +D+ ++++R E    P+      I  K T  F K 
Sbjct: 71  -GYK-VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKV 122

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFS 166
                 L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  S
Sbjct: 123 LEIFNLLPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELS 182

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           RR I+E    TR +  +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+
Sbjct: 183 RRNIEELFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMST 242

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL FPHHE EIAQ   A   E     W+H   L + G++MSKS GN
Sbjct: 243 KYLGNQFDIHGGGMDLKFPHHECEIAQG-KAGHGESPVRYWMHANMLTMNGQRMSKSTGN 301

Query: 285 FITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--- 340
           +I   +L+     F  + +   VIR   +  HYR  +D + + +  AE   ++  +    
Sbjct: 302 YILPMQLITGNNTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFTRLMEAMKI 361

Query: 341 --STSKGIIDPAVL----------SALYNDLNT-------VSAIQALHKLARESTK---- 377
               +  +  P  L           AL +D N+         A++ + +L     K    
Sbjct: 362 LNELTTEVTHPTALPIAEWKQKCYEALLDDFNSPILIAHLFEAVKWVFQLKNGEEKISVE 421

Query: 378 -NHDLLPIFNASAH-ILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRK 433
             ++L  + NA    +LG++  +   + N  +   ++ L+  R+     K ++ +D IR 
Sbjct: 422 ELNELKTLMNAFVFDVLGLQAEQLAADNNDKLDGVLQLLIDMRMEARANKDWALSDKIRD 481

Query: 434 QLESKGFILEDYKN 447
            L   G  L+D K+
Sbjct: 482 ALLPLGIQLKDGKD 495


>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 399

 Score =  243 bits (621), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 149/399 (37%), Positives = 210/399 (52%), Gaps = 71/399 (17%)

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L CL P+ +PR ++HI Q+I +I+ II +  AY    ++ F   + P YG  S RK+D+ 
Sbjct: 4   LHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDN 63

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G RV     KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDI
Sbjct: 64  RAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDI 123

Query: 234 HGGGLDLIFPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           HGGG DLIFPHHENEIAQS   CC   I    N WIHNGF+N+  +KMSKS GNF+TI +
Sbjct: 124 HGGGEDLIFPHHENEIAQSRAACCDSSI----NYWIHNGFVNVNSQKMSKSLGNFVTIRK 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           + E        +    +R+ +L THYR PI++T+++L  A   L    QT          
Sbjct: 180 VTEL-------YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQ 232

Query: 341 -----------STSKGI--IDPAVLSALYNDLNTVSAIQALHK---------LARESTKN 378
                      +T+  I  +     +++ +DL+T  A+ A+ +           R+  K 
Sbjct: 233 HQSKAGDPLPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQ 292

Query: 379 HDLLPIFNA----------------SAHILGIEVCKEHLNKNISIAIEKLVQ---ERLIL 419
              L   +A                S++   ++  +E   +  S+  E+++Q   ER   
Sbjct: 293 EKRLESLSAMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSA 352

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            K K++  +D IRK+L + G  L D   PD     T W+
Sbjct: 353 RKAKQYEKSDEIRKELAAVGIALMD--GPDG----TTWR 385


>gi|156744229|ref|YP_001434358.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156235557|gb|ABU60340.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 401

 Score =  243 bits (620), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 139/381 (36%), Positives = 200/381 (52%), Gaps = 30/381 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++TL  +  E        + +YVCG T YD  H+G+A   ++FDVL R +R+  G   V
Sbjct: 3   LFDTLRGQKAELLIPRDRPLTLYVCGVTPYDTTHVGHAHTFLIFDVLIRYIRHCGG--TV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y +N TD+DD + ERA ++   IP ++    +  + T+QFVKD   L  + P   P+A+
Sbjct: 61  RYCQNTTDVDDPLFERAARD--GIPWDE----LARRETEQFVKDCQALNLIPPDFFPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG-----TRVPE 181
             I  MI +I+ ++  GHAY  N  + FD S+ P YG+ +R    E  +         P 
Sbjct: 115 EEIATMIPIIERLVELGHAYVRNGNVYFDVSTEPTYGAMARVDGYEALLALANERGNNPN 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K +P DF+LW+RS P EP W SPWGRGRPGWHIEC+AM++ YLG   DIHGGG DLI
Sbjct: 175 DPLKDDPLDFVLWQRSRPGEPTWPSPWGRGRPGWHIECTAMATRYLGPQIDIHGGGRDLI 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH +EI Q+          + W+H G   L+G+KMSKS GN + I + L+        
Sbjct: 235 FPHHPSEIVQTEPYTGKRPFVHFWVHGGLAWLDGQKMSKSLGNLVFIKDALQQHS----- 289

Query: 302 WPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAV 351
             A  +R  +L   YR+  ++           V+RLT A            +        
Sbjct: 290 --ADALRWYLLSFPYRDDFEYVRSDVPLAVQQVERLTAALAAQGDSKGEPLNAEPFYQTY 347

Query: 352 LSALYNDLNTVSAIQALHKLA 372
            +AL NDL+T  A+  +  L+
Sbjct: 348 FAALDNDLDTPKALAQIGALS 368


>gi|291277354|ref|YP_003517126.1| cysteinyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964548|emb|CBG40401.1| cysteinyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 486

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 242/475 (50%), Gaps = 49/475 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIY++  ++      I    +R+YVCGPTVYD AH+G+AR  IVFD+L R L    
Sbjct: 16  RASMKIYDSKSKQKVPLVPIKEKEVRIYVCGPTVYDDAHLGHARSSIVFDLLRRTLN-LS 74

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G K  T V+N TDIDDKII ++      IP+ +    +T      ++ D  RL  L P  
Sbjct: 75  GYK-TTLVKNFTDIDDKIIHKSLNH--QIPLEE----VTQTYIHSYIHDMDRLNVLPPDI 127

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            P+AT  +  +I  ++ ++  GHAY++ N ++  D    P YGS S+R +D++   +R+ 
Sbjct: 128 HPKATQSLGAIISFVERLLHRGHAYQSENGDVYLDVKKDPLYGSLSQRGVDDENQ-SRIQ 186

Query: 181 EKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIH 234
           E   KK+P DF+LWK     +  G+ESP+G GRPGWHIECSAM   +L         DIH
Sbjct: 187 ENKEKKDPRDFVLWKTYKGEDDIGYESPFGFGRPGWHIECSAMIDEHLAYKDEDFCIDIH 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHENE +Q+ CA   E  A  W+HN  +++ G KMSKS GN   + + L  
Sbjct: 247 GGGADLLFPHHENEASQTRCAYDSE-LAKYWMHNEMVHINGEKMSKSLGNSFFVKDAL-- 303

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------WPQTSTSKGI 346
            KF        ++R  +L THYR  + F  + L  ++  L K         P        
Sbjct: 304 -KFH----DGEILRNYLLTTHYRAILHFNEEDLLMSKKRLDKIYRLKKRALPVQGVRDKD 358

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--------IFNASAHI---LGIE 395
            +  +L  + +DLN    +  L +    + ++ D  P        I +  A I   LGI 
Sbjct: 359 FEARLLHPMQDDLNISQTLSVLDEFLAHANQSLDQNPKDKALHANIISNLAFIEALLGIG 418

Query: 396 VCKEHLNKNISIAIEKL------VQERLILLKMKKFSSADYIRKQLESKGFILED 444
                +   + ++ EK+      + ER    K K +  AD IR++L  +G  + D
Sbjct: 419 GKDGKVYFQLGVSEEKVKWIEEKIHERKNAKKEKNYVLADEIRQELHEEGIAIMD 473


>gi|228473829|ref|ZP_04058571.1| cysteine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274670|gb|EEK13504.1| cysteine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 494

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 168/495 (33%), Positives = 241/495 (48%), Gaps = 58/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR LR+ 
Sbjct: 1   MNHQLKIFNSLTGEKEIFVPLHANNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRALRFL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +D+ ++++R E    P+      I  K T  F K 
Sbjct: 61  -GYK-VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFS 166
                 L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  S
Sbjct: 113 LEIFNLLPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNRRGLNYGELS 172

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           RR I+E    TR +  +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+
Sbjct: 173 RRNIEELFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMST 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL FPHHE EIAQ   A   +     W+H   L + G++MSKS GN
Sbjct: 233 KYLGDQFDIHGGGMDLKFPHHECEIAQG-KAGHGQSPVRYWMHANMLTMNGQRMSKSTGN 291

Query: 285 FITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
           +I   +L+     F  + +   VIR   +  HYR  +D +            RL EA  +
Sbjct: 292 YILPMQLISGDNTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAVKI 351

Query: 334 LSKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQALHKLAR------------E 374
           L++        G +   +         AL +D N    I  L +  +             
Sbjct: 352 LNELTSEIEHPGPLSSEIEQWKQKCYDALLDDFNAPILIAHLFEAVKWIFQVKSGEEKIS 411

Query: 375 STKNHDLLPIFNASAH-ILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
             +  +L  + NA    +LG+  E      N  +   ++ L+  R+     K F+ +D I
Sbjct: 412 IQELEELRSLVNAFVFDVLGLKNEELNAANNDRLDGVLQLLINMRMEARANKDFALSDKI 471

Query: 432 RKQLESKGFILEDYK 446
           R +L + G  L+D K
Sbjct: 472 RDELLALGIQLKDGK 486


>gi|193084115|gb|ACF09782.1| cysteinyl-tRNA synthetase [uncultured marine crenarchaeote
           KM3-153-F8]
          Length = 469

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 163/476 (34%), Positives = 234/476 (49%), Gaps = 50/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K +NTL RK   F+     N+ +Y CGPTVYD+AHIGN R  +  D+L R L Y  G K
Sbjct: 4   LKFFNTLGRKKESFKHDKNKNVLIYCCGPTVYDYAHIGNFRTFLFEDILIRYLEYK-GYK 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V NITDIDDK I+ + +   ++P+ +     T K    F +D  +L        PR
Sbjct: 63  -IKFVMNITDIDDKTIKASSEN--NVPLKE----YTKKYEDAFFEDIKKLRIRKAESYPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKIDEQKMGTRVPEKY 183
           AT HI  ++  I+ +     AYE+N  I F  S    YG+ S  +  +         ++Y
Sbjct: 116 ATEHIDNIVTHIKKLKELEFAYESNGSIYFSISKFKKYGTLSGEKNKNINNKKPINSDEY 175

Query: 184 HKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K    DF LWK     +    W++  G+GRPGWHIECS MS+  L    DIH GG+DLI
Sbjct: 176 SKNEIQDFALWKAWVQDDNNVFWDNELGKGRPGWHIECSVMSTKLLNDSIDIHAGGVDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+       K    W+H   L +EG+KMSKS GNF T+ +LL+        
Sbjct: 236 FPHHENEIAQAEALTN-NKFVRYWLHAEHLIVEGKKMSKSEGNFFTLRDLLK------EG 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA------------EILLSK---------WPQT 340
           +    IRL ++ +HYR  ++FT+  L +A            ++ LSK         +  T
Sbjct: 289 YEPLTIRLLLISSHYRSQLNFTINGLKQASENIKRLQEIYTKVKLSKTKNGYDEELFKHT 348

Query: 341 STSKGIID---------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            TSK   +         P  LS ++N +  ++  + +           ++L  F     I
Sbjct: 349 KTSKEKFERAMDDDFNMPVALSVIFNYVRIIN--KYIDNTELTEMNKQEILDFFVKIDQI 406

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           L +   KE         IE+L++ R    + K +  AD IRK+L   GFI+ED  N
Sbjct: 407 LDVVNTKEKDQIFPEPRIEELIRRRNEARERKDWKKADEIRKELLKSGFIIEDTSN 462


>gi|298246065|ref|ZP_06969871.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297553546|gb|EFH87411.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 395

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 140/404 (34%), Positives = 207/404 (51%), Gaps = 35/404 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL + I  F  +      +YVCG T YD  H+G+A   + FD L R L       
Sbjct: 1   MKLFNTLTQSIDPFTPLKQGLATLYVCGVTPYDTTHLGHAFTYVSFDTLIRYLEAQ--GI 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TDIDD ++ +AR+      +N A   +  + T +F+ D   L    P    R
Sbjct: 59  TVRYVQNVTDIDDDVLRKARE------LNMAWDELGRRETARFLGDMDALNVRRPDVYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR--------RKIDEQKMG 176
           AT+ IP ++ ++Q+++  G AY +   + +     P++G+  R          +D     
Sbjct: 113 ATDAIPDIVEIVQDLVEKGLAYVSEGCVFYSVKQDPDFGTLGRAIGLNDYQSMLDVANER 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE   K +P DF+LW+   P EP W SPWG GRPGWHIECSAMS  +LG+  DIHGG
Sbjct: 173 GNFPEDKRKHDPLDFVLWQAQAPGEPAWPSPWGPGRPGWHIECSAMSIRHLGQQIDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHH  EIAQS      +  +  W+H G +  +G KMSKS GN   I+ LL+T  
Sbjct: 233 GADLAFPHHTCEIAQSEHYTGKKPFSQFWMHTGMVYQDGEKMSKSLGNLTLISNLLKT-- 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IID 348
                +   VIR+ +   HYR+P + T + L++A+  +  + Q     G         + 
Sbjct: 291 -----YSPDVIRVTLQSHHYRQPWECTPEDLSKAQETIELFKQVRRLVGEESHGEDAQVR 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
                A+ NDL+  +A+  L + A+    N DL    NA A ++
Sbjct: 346 ALFQQAMENDLDAPTAVSGLREAAQTVIANRDL----NAGAEVI 385


>gi|269926313|ref|YP_003322936.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789973|gb|ACZ42114.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 392

 Score =  243 bits (619), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 139/389 (35%), Positives = 200/389 (51%), Gaps = 29/389 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL  +I      D   + +YVCG T YD  H+G+A   + FDVL R L     + 
Sbjct: 1   MKLYDTLTNQIKPLAGED-GRVSVYVCGITPYDTTHLGHAFLYVTFDVLIRYLESTGYQ- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N+TDIDD I+ +A++      +N     +  + T +F+ D   L    P H P 
Sbjct: 59  -VIYTQNVTDIDDDILRKAKE------LNMFYLDLAERETNRFLSDLRALNVRMPDHYPH 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT  I  M+ ++  +I  GHAY  +  + FD  +   +G  S+   +E     R     P
Sbjct: 112 ATQEIDGMVEIVSKLIDKGHAYVRDGNVYFDIDTYEGFGQLSKLSREEMIAIARERGGNP 171

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   + +P DF+LW+RS   EP W+SPW +GRPGWHIECS MS  YLG    IHGGG DL
Sbjct: 172 EDPLRDDPLDFLLWQRSAEGEPAWDSPWSKGRPGWHIECSTMSLKYLGASLTIHGGGADL 231

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE E AQS C   I      W+H G L  +G KMSKS GN + ++ LL+       
Sbjct: 232 IFPHHECERAQSECYTGISPFVKHWMHVGMLRYQGEKMSKSLGNLVLVDRLLQ------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS------- 353
           ++    +RL ++  HY+E  ++    + EAE L  K    ++     D            
Sbjct: 285 NYSPDAVRLVLISHHYQESWEYQDSMIEEAEKLAQKIRIAASLAPAHDAEFQDTYEFDLF 344

Query: 354 --ALYNDLNTVSAIQALHKLARESTKNHD 380
             A+ ++LNT  A++ L  L+ E  +N D
Sbjct: 345 RQAMEDNLNTPRAVELLRSLSEEIIQNDD 373


>gi|313204739|ref|YP_004043396.1| cysteinyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444055|gb|ADQ80411.1| cysteinyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 488

 Score =  243 bits (619), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 174/502 (34%), Positives = 246/502 (49%), Gaps = 75/502 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +    + MYVCGPTVY   H+GN R  I FD++YR L  Y
Sbjct: 1   MEHNLYIYNTLSRKKEQFIPLHEDRVGMYVCGPTVYSDVHLGNCRTFISFDLIYRYL-LY 59

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           DDK  ++A+ E    P+      I  K T  F   
Sbjct: 60  LGYK-VRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE-PME-----IVQKYTVGFHDV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS----SIPNYGSFS 166
                 L P+ +P AT HI + I +++ I+  G+AYE    + FD       +P YG  +
Sbjct: 113 LNVFNTLPPSIEPTATGHISEQIEMVKAILESGYAYEIEGTVYFDVEKYNKDLP-YGILT 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAM 222
            RK+++   GTR +  +  KK   DF LW ++ P   M+  W SPWG G PGWHIECSAM
Sbjct: 172 NRKLEDLLEGTRELGGQDEKKGRLDFALWIKAKPETLMQ--WPSPWGWGFPGWHIECSAM 229

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S+ YLG  FDIHGGG+DL   HH NEIAQS   + +      W+H   L + G +MSKS 
Sbjct: 230 STKYLGATFDIHGGGMDLQATHHTNEIAQSQACNHV-APVKYWMHTNMLTVNGVRMSKSA 288

Query: 283 GN-------FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQ 325
           GN       F   + LLE      R +    +R  M  +HYR  +DF+           +
Sbjct: 289 GNGFLPKELFTGAHPLLE------RGYSPMTVRFFMAQSHYRSTLDFSNEALQASEKGFE 342

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLS----ALYNDLNT----------VSAIQALHKL 371
           RL +    L K  Q ST+  +   ++ S    A+ +D NT          + AI  +H  
Sbjct: 343 RLMDGYARLQKL-QASTASSVYTSSLRSKCEEAMNDDFNTPIAIAHLFDALKAINLIHD- 400

Query: 372 ARESTKNHDL------LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKF 425
            +E+    DL        +F      L  EV     ++    A++ L+  RL   + K +
Sbjct: 401 GKETISAKDLEELKSVFKVFIEDVLGLKSEVATSGGSEAYKGAVDLLLNMRLAAKQNKDW 460

Query: 426 SSADYIRKQLESKGFILEDYKN 447
           +++D IR +L + GF ++D K+
Sbjct: 461 ATSDKIRNELTALGFEIKDTKD 482


>gi|91216061|ref|ZP_01253030.1| cysteinyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186038|gb|EAS72412.1| cysteinyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 497

 Score =  243 bits (619), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 62/494 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYN++  +  +FQ I    + MYVCGPTVY   H+GN R  I FD+++R L++  G
Sbjct: 7   QSLKIYNSITGEKEDFQPITKGYVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K + YVRNITD           +D+I ++A+      P+      +  K +  F +   
Sbjct: 66  YK-IRYVRNITDAGHLENDGEEGEDRIAKKAKVMELE-PME-----VVQKYSIDFHQILE 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
           +   L P+ +P AT HI + I  I+ II  G AY+ N  + FD    +   +YG  S RK
Sbjct: 119 KFNNLPPSIEPTATGHIIEQIETIKTIIDKGLAYQVNGNVYFDVLKYNEKHHYGKLSGRK 178

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           I++    TR +  +  KKNP DF LWK++ P     W SPWG G PGWH+EC+ MSS YL
Sbjct: 179 IEDLISNTRELAGQSDKKNPQDFALWKKAEPQHIMRWPSPWGIGFPGWHLECTVMSSKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DL FPHHE EIAQ   A   +   N W+H   L L G+KMSKS GN I 
Sbjct: 239 GDEFDIHGGGMDLKFPHHECEIAQGQAATG-KDPVNYWMHANMLTLNGKKMSKSTGNNIL 297

Query: 288 INELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
             EL     +   +S+ APVIR  ML  +YR  +DF+ + L+ +E    K  ++ ++  +
Sbjct: 298 PRELFTGDNETLSKSYTAPVIRFFMLQANYRSILDFSDEALSASEKGFQKLMESLSTLKV 357

Query: 347 IDPAVLS-------------ALYNDLNT-------VSAIQALH-------KLARESTKNH 379
           +  +  S             A+ +D N+         A++ ++       +L+RES    
Sbjct: 358 LKASKTSDFNVNTWKDKCYEAMNDDFNSPILIAHLFEAVKQINLAKSGDKRLSRESL--- 414

Query: 380 DLLP--IFNASAHILGIE----VCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIR 432
           DLL   + +    ++G+E      K   N  +    IE ++Q R      K F ++D IR
Sbjct: 415 DLLSKTMNDFIFEVMGLEDLEDTSKSEANTDDFKELIEFMIQMRNHARLNKDFETSDKIR 474

Query: 433 KQLESKGFILEDYK 446
            +L      L+D K
Sbjct: 475 DKLLKMDVELKDQK 488


>gi|317056857|ref|YP_004105324.1| cysteinyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449126|gb|ADU22690.1| cysteinyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 471

 Score =  242 bits (618), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 165/472 (34%), Positives = 233/472 (49%), Gaps = 51/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF   +   + MY CGPTVY +AHIGN R  I+ DVL + +R+   + 
Sbjct: 1   MKIYNTLSHKVEEFVPNEAGKVSMYTCGPTVYHYAHIGNLRSYIMEDVLEKYMRWTGLD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F  D  +L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTVME------IAKFYTDAFFADCAKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT +I + I +I ++I  G+AYEA   I FDTS +  Y  F     ++ +
Sbjct: 113 NIKTPDVVAPATTYIDEFIKVISSLIEKGYAYEAGGNIYFDTSKLDEYYVFHNFSAEDLE 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  WESPWG G PGWHIECS +S   LG 
Sbjct: 173 VGVREGVEEDTNKRNKADFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSCISMKNLGD 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D IFPHH NEIAQS  A    K  N W H   LN +  KMSKS G F+T++
Sbjct: 233 KLDIHCGGVDNIFPHHTNEIAQS-EAYIGHKWCNYWFHVHHLNTDTGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------- 339
            LLE K      +   V R   L +HYR+ + F+ + L  A+    K             
Sbjct: 292 -LLEEK-----GYDPLVYRFFCLQSHYRKSLVFSWENLDNAKTAYDKLTARIAALLNEKD 345

Query: 340 ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL--G 393
                +  K  +  A  +A+  DLNT + +  ++ + +        L        +L  G
Sbjct: 346 AAPADAAKKDELKAAFAAAMDEDLNTSNGMTVIYDILKSDASAATKLAAIEDIDKVLCVG 405

Query: 394 IEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +      LN+  S A     +  LV+ER    K K F+ AD +R ++ + G+
Sbjct: 406 LIAAANKLNEKNSSADIPAEVMALVEERQAARKAKDFAKADELRDKITALGY 457


>gi|283957215|ref|ZP_06374677.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791287|gb|EFC30094.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 462

 Score =  242 bits (618), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 162/461 (35%), Positives = 233/461 (50%), Gaps = 55/461 (11%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LAQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSGQTLEE------ITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPHHENE AQ  C  +  K
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPHHENEAAQCRCGCK-RK 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            ANIW+HNGF+ ++G KMSKS  N   I + L  K+F G +     +R  +  +HYR   
Sbjct: 240 LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL--KEFMGEA-----LRFYLSSSHYRSHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTS-----------------KGIIDPAVLSALYNDLNTVS 363
           ++++  L  A+  L K+ +                     K  I   +L  L +DLN   
Sbjct: 293 NYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISK 352

Query: 364 AIQALH--------KLARESTK---NHDLLPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L         +L +E+       ++    +  A I G       L      +K   
Sbjct: 353 ALALLDDFISSANLELDKENKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEER 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             IEKL+ ER    K K F++AD IR+QL SK   L D  N
Sbjct: 413 EEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN 453


>gi|325106147|ref|YP_004275801.1| cysteinyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974995|gb|ADY53979.1| cysteinyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 486

 Score =  242 bits (618), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 248/493 (50%), Gaps = 62/493 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + IYNT+ RK  EF+AI+P  + MYVCGPTVY   H+GN R  I FD++YR L + 
Sbjct: 1   MYDSLFIYNTISRKKEEFKAINPPYVGMYVCGPTVYSDVHLGNCRTFISFDLIYRYLMHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +DKI ++A+     +   + + I+ +  T  F   
Sbjct: 61  -GYK-VRYVRNITDAGHLEGDGDSGEDKISKKAK-----LASLEPMEIVQTY-TNGFHDM 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
                 L P+ +P AT HI + I +++ I+  G AYE +  + FD        NYG  + 
Sbjct: 113 MKVFNVLPPSIEPTATGHIIEQIEMVKTILAKGLAYEVDGSVYFDVEKYNQHHNYGVLNG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           RK+++    TR +  +  K    DF LW ++ P     W SPWG G PGWH+ECSAMSS 
Sbjct: 173 RKLEDLLNNTRELGGQDQKHGKLDFALWIKAKPEHLMQWPSPWGMGFPGWHLECSAMSSK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL   HH NEIAQ+  A   +  AN WIH   L + G+KMSKS GN 
Sbjct: 233 YLGEQFDIHGGGMDLAPTHHTNEIAQNVAACG-KHPANYWIHTNMLTVNGQKMSKSLGNS 291

Query: 286 ITINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILL 334
              +EL   + +   + +   V++  ML  HYR  +DF+           +RL  A  LL
Sbjct: 292 FLPHELFTGQHELLNKGYSPMVVKFFMLQAHYRSTLDFSNEALDASEKGFKRLMNALGLL 351

Query: 335 SKWPQTSTSK---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------- 380
            K   + TS+     I+    SA+ +D N+   I  L  + +     +D           
Sbjct: 352 DKLKVSETSEVDLKAIEQRFESAMNDDFNSPILIAELFDVVKTINSIYDGKTSISEADLI 411

Query: 381 -LLPIFNASAH-ILGIEVCKEHLNK-----NISIAIEKLVQERLILLKMKKFSSADYIRK 433
            L  + N   H ILG++      N+     N  I I K  +E+      K ++++D IR 
Sbjct: 412 GLTSLLNEYVHNILGLKDELSEGNEIEPLMNFLINIRKEAKEK------KDYATSDKIRI 465

Query: 434 QLESKGFILEDYK 446
            L+  G+ L+D K
Sbjct: 466 GLQEIGYQLKDSK 478


>gi|228898843|ref|ZP_04063125.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228963190|ref|ZP_04124359.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228796448|gb|EEM43887.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228860743|gb|EEN05121.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 420

 Score =  242 bits (618), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 154/444 (34%), Positives = 231/444 (52%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 338 PQTSTS------KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST       K +++      A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLVEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ +    + +   IE+L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELTQ---EELLDEEIEELIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KGRNIILED------TAQGTRWKR 419


>gi|153831904|ref|ZP_01984571.1| cysteinyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871902|gb|EDL70725.1| cysteinyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 457

 Score =  242 bits (618), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 161/460 (35%), Positives = 234/460 (50%), Gaps = 37/460 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K++++NTL R +  F  I+   + +Y CGPTVYD+AH GN R  +  DVL R L      
Sbjct: 5   KLQLFNTLGRALEPFNTIESGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLEL--NG 62

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V +V NITD+          +DK+ + AR++      N +   I       F+ D  R
Sbjct: 63  YDVNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAKYFEDVFLDDLNR 116

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L  + P+   RA  HI + I  +Q +   G  Y+ ++ + FD++ +P+YG  ++   +  
Sbjct: 117 LNIIKPSIICRAAEHIQEQIEFVQELEQKGFTYQTSDGVYFDSAKLPDYGKLAKLDREGL 176

Query: 174 KMGTRVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           + G RV E   KK+P DF LWK S  TP +  WESPWG G PGWHIECSAM+  YLG+VF
Sbjct: 177 EAGIRV-EMAEKKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGEVF 235

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG D I  HH NEIAQ C A      AN W+H  FL L   K+SKS G  + ++ L
Sbjct: 236 DIHVGGEDHIPVHHTNEIAQ-CQAKNGHVQANYWLHGFFLQLNKEKISKS-GTSLRLDAL 293

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTSK 344
           +E      + +     R  +L +HYR  + FT + L  A+  L       S  P+     
Sbjct: 294 IE------KGYDPLAYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKVSALPEGGKVD 347

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                  +S + NDL    AI  + +L   +  + D+         + G+E+ K    + 
Sbjct: 348 QTFVERFMSLINNDLAIPQAIALMWELLGSALNDADIKATARYFDSVFGLELDKVE-EEE 406

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           I   I +LV+ RL + K KK+  AD IR+Q+   G+ + D
Sbjct: 407 IPREILELVELRLQMKKQKKYQQADEIRQQVAEFGYRIND 446


>gi|229176690|ref|ZP_04304094.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228606733|gb|EEK64150.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 420

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 155/444 (34%), Positives = 229/444 (51%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIKFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKW 337
           +++++       + +   +IR  ML  HYR PI+F+          ++R+  A   L   
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 338 PQTSTSKGIIDPAVLS-----------ALYNDLNTVSAIQALHKLARESTK----NHDLL 382
            ++ST     +   LS           A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLSEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ K    + +   IE+L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELSK---EELLDEEIEELIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILED------TAQGTRWKR 419


>gi|325529638|gb|EGD06509.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 466

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 166/471 (35%), Positives = 235/471 (49%), Gaps = 39/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           +++Y+T  R +  F  I P  + MY CGPTVYD AHIGN R  +  D+L R L+R  Y  
Sbjct: 3   LELYDTWSRAVRPFTPIRPGRVGMYCCGPTVYDDAHIGNLRTYVFEDILRRVLMRNGY-- 60

Query: 64  KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             V +V NITD+     D      + E  S    ++   I  + T  FV+D   L  L P
Sbjct: 61  -AVRHVVNITDVGHLTSDADEGEDKMEKGSRRTGESAWAIAQRYTDAFVQDWRALNLLEP 119

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T   RAT+HI + I  I+ +   G+ Y  ++ + FDT    +YG  +R      + G RV
Sbjct: 120 TIWCRATDHIAEQIAFIETLERAGYVYRTDDGLYFDTRRQDDYGHLARLDRAGLQAGKRV 179

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K++  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ YLG +FDIH G
Sbjct: 180 AMG-GKQSVTDFALWKFSRAGVKRQMEWDSPWGRGFPGWHIECSAMSAKYLGTLFDIHCG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELLETK 295
           G D I  HH NEIAQ+  A    + AN W+H  FL L+   KMSKS+G+F+ +  L E  
Sbjct: 239 GEDHIAVHHSNEIAQTQAAHGT-RLANYWLHGHFLTLDADAKMSKSSGDFVRLQTLQE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIID 348
               R+      R   L  HYR  + FT   L  A+  L++       WP      G  D
Sbjct: 296 ----RNIDPLAYRYLCLTAHYRSKLHFTWASLDAAQTALNRLRQLYVAWP----DGGRAD 347

Query: 349 PAVL----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-EHLNK 403
           PA +    + L +DLN   A+  L +L R       L    ++   +LG+ +     ++ 
Sbjct: 348 PAFVARFDAELNDDLNLPRALAVLWELVRSDLPPSTLKATVDSFDTVLGLGLRDWTAVSF 407

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           +I   +  L+  R      + ++SAD IR  L ++G+ +ED      GQR+
Sbjct: 408 DIPEDVRVLLDARERARAERDWASADRIRDSLRAQGWRVEDTT---EGQRL 455


>gi|225467252|ref|XP_002268960.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 408

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 144/391 (36%), Positives = 200/391 (51%), Gaps = 66/391 (16%)

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
           T L CL+PTHQPR ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK++
Sbjct: 2   TDLHCLSPTHQPRVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLE 61

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
             + G RV     K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   F
Sbjct: 62  NNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKF 121

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHENEIAQSC A + E   + W+HNG +     KMSKS GNF TI ++
Sbjct: 122 DIHGGGIDLIFPHHENEIAQSCAACQ-ESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQI 180

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKW 337
            +        +    +R  +L THYR P+++++              Q L + E  LS +
Sbjct: 181 TDL-------YHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLF 233

Query: 338 PQTSTSKGIIDPAV-----------LSALYNDLNT------------------------- 361
            + +     I PA             + + +DL+T                         
Sbjct: 234 QEVNGRNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKQ 293

Query: 362 -----VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN---ISIAIEKLV 413
                +SA+++L KL +E      +L + +  A+   ++  K    K    I   +  L+
Sbjct: 294 QKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLI 353

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILED 444
           +ER +  K K FS  D IR  L SKG  L D
Sbjct: 354 EERALARKNKDFSKGDQIRADLASKGIALMD 384


>gi|228919040|ref|ZP_04082419.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228956531|ref|ZP_04118327.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229040995|ref|ZP_04189758.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229107776|ref|ZP_04237412.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229125607|ref|ZP_04254639.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229142896|ref|ZP_04271337.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229148499|ref|ZP_04276755.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296500924|ref|YP_003662624.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228634915|gb|EEK91488.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228640517|gb|EEK96906.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228657799|gb|EEL13605.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228675625|gb|EEL30833.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228727292|gb|EEL78486.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803096|gb|EEM49918.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228840565|gb|EEM85827.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296321976|gb|ADH04904.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 420

 Score =  242 bits (617), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 153/444 (34%), Positives = 226/444 (50%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +    +P       I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------Q 339
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +          +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 340 TSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLL 382
             +S  + D              A   A+ +D NT +AI  L+ +A  + +     H   
Sbjct: 285 MESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 383 PIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  A          ILG+E+ K    + +   IE+L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELSK---EELLDEEIEELIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILED------TAQGTRWKR 419


>gi|307719502|ref|YP_003875034.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
           6192]
 gi|306533227|gb|ADN02761.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
           6192]
          Length = 702

 Score =  241 bits (616), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 172/489 (35%), Positives = 249/489 (50%), Gaps = 54/489 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++++NT+ R    F   +   + MY CGPTVY++AHIGN R  I  DVL R L  + G 
Sbjct: 234 ELRLFNTMGRIQEPFVPREAGKVGMYTCGPTVYNYAHIGNLRTYIFEDVLRRTL-LHAGY 292

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           + V +V N+TD+          +DK+I+ AR+         ++  I    T+ F +DT +
Sbjct: 293 RLV-HVMNVTDVGHLTSDGDEGEDKVIKAARER------GMSVWEIAEFFTRAFFEDTDK 345

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L    P    +AT HIP+MI L++ +   GH Y A   + +D S+ P YG  +R  +DEQ
Sbjct: 346 LNIQRPEIVCKATEHIPEMIDLVKRLEERGHTYLAGGNVYYDISTFPRYGELAR--LDEQ 403

Query: 174 KM--GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLG 228
            +  G RV    HK++P DF+LW   +  E     W+SPWGRG PGWH+ECSAMS  YLG
Sbjct: 404 DLRAGARVGVDAHKRSPRDFVLWFTRSKFEHQAMVWDSPWGRGYPGWHLECSAMSMKYLG 463

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIH GG+D I  HH NEIAQS  A         W+H  FL ++  KMSKS GNF+T+
Sbjct: 464 EQFDIHCGGVDHIPVHHTNEIAQSEGATGKHPWVRYWLHAEFLVMDSGKMSKSKGNFLTL 523

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------EILLS----- 335
           +  LE + F    +     R   L  HYR  + F+ + L  A        E L       
Sbjct: 524 SG-LEEEGFHPLDY-----RYFCLGAHYRSQLFFSWEALEAARNARRNLIEHLSGLHPRD 577

Query: 336 KWPQTSTSK--GIIDPAVLSALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHIL 392
            W QT  S+           A+ +DL T  A+  L + L  E+    +   +      IL
Sbjct: 578 GWEQTRLSERGEAYMREFEEAIGDDLATPRALAVLWRALKDEALPPEERAVLAVTMDRIL 637

Query: 393 GIEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           G+ + +   + + +   + +LV+ R  L K + F+ AD IR +L  +G I+ED   P   
Sbjct: 638 GLSLAEAIASDDALEPELLELVRRREALRKQRNFAEADRIRDELARRGIIVED--TPQG- 694

Query: 452 QRMTRWKQK 460
               RWK+K
Sbjct: 695 ---PRWKRK 700


>gi|19173375|ref|NP_597178.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697526|sp|Q8SRE0|SYC_ENCCU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19170964|emb|CAD26354.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 480

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 127/294 (43%), Positives = 177/294 (60%), Gaps = 8/294 (2%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K +K+YN++ R I  F     + ++MY+CGPTVYD +HIG+AR  ++FDV+ R+L  Y
Sbjct: 1   MDKTLKLYNSITRTIDIFTPRKGNEVKMYICGPTVYDSSHIGHARTYVMFDVIRRVLSDY 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V +V NITDIDDKII RA +   S+        +T K T++F +D   L   +P+
Sbjct: 61  L-KYNVRFVMNITDIDDKIIARANETGASM------EEVTRKYTEEFFEDMKTLNVRSPS 113

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
                T+++ +++  I+ +  +G AYE+   + FD +S     S+   K  +  + +   
Sbjct: 114 FVTFVTSYVDKIVKFIEKLEANGLAYESRGSVYFDLNSYQQRYSYPLFK-SKDGINSEGD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF+LWKRS   EP +ES WG GRPGWHIECS MSS  LG+  DIH GG+DL
Sbjct: 173 ENKDKRSPCDFVLWKRSKENEPRYESKWGHGRPGWHIECSVMSSDILGEDLDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHHENEIAQ       E     ++H G LN+ G KMSKS  NF TI E L+T
Sbjct: 233 AFPHHENEIAQCQAYFMQEPWVKCFLHTGHLNISGLKMSKSLKNFTTIKEALKT 286


>gi|284040387|ref|YP_003390317.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283819680|gb|ADB41518.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 499

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/501 (33%), Positives = 248/501 (49%), Gaps = 71/501 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F A++   + MYVCGPTVY++ H+GN R  + FD LYR L +  G K
Sbjct: 4   LQLYNTLSRKKEPFVALNAPYVGMYVCGPTVYNYVHLGNVRTFLTFDTLYRYLTFI-GYK 62

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRN+TD+          +DKI   A+ E    P+      I  + T  F     + 
Sbjct: 63  -VRYVRNLTDVGHLVGDGDDGEDKIGRMAKLEKVE-PME-----IVQRFTNDFHTVMAQF 115

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKI 170
               P+ +P AT H+ + I  +Q ++ +G AYE+N  + FD  +      NYG  S R +
Sbjct: 116 NTFPPSIEPTATGHMVEQIEAVQTLLANGLAYESNGSVYFDIDTYNKRGGNYGKLSGRIL 175

Query: 171 DEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           D+    TR +  +  K++P DF +WKR+ P     W SPWG G PGWH+EC+ MS+ YLG
Sbjct: 176 DDLLNETRELDGQSEKRSPLDFAIWKRAAPEHLMRWNSPWGEGFPGWHLECTCMSTKYLG 235

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           K FDIHGGG+DL FPHHE EIAQ      ++     W+H+  L + G+KMSKS GN    
Sbjct: 236 KQFDIHGGGMDLKFPHHECEIAQGDGLTGVDPV-RYWMHSNMLTVNGQKMSKSLGNSFLP 294

Query: 289 NELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE------------ILLS 335
            EL   +     + +    +R  ML +HYR  +DF+   L  A+            I   
Sbjct: 295 AELFAGSHPLLDQPYSPMTVRFFMLQSHYRSTLDFSNDALKAAQKGYRRLANGLRVIKTL 354

Query: 336 KWPQTSTSK-GI-IDPA-----------VLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
            +P  + ++ G+ +D A              A+ +DLNT  AI  L  L     K  ++L
Sbjct: 355 SYPSDAEAENGVAVDEAKQKEIQKAVQQFYDAMNDDLNTAVAIAQLFTL----LKYVNML 410

Query: 383 PIFNASAHILGIE---VCKEHLNKNISIAIEKL--------VQERLILL-----KMKKFS 426
            +    A +LG E   + KE     +   +  L        V E L+ L     + +++ 
Sbjct: 411 YLNQLQAAVLGEETFNLLKESFVTFMQDVLGLLEEGATNQPVLEGLLTLYKEYKEQRQYD 470

Query: 427 SADYIRKQLESKGFILEDYKN 447
             D IR   +++G  ++D K+
Sbjct: 471 KVDQIRSYFKAQGLAIKDMKH 491


>gi|317504596|ref|ZP_07962566.1| cysteine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664290|gb|EFV03987.1| cysteine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 496

 Score =  241 bits (615), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 177/500 (35%), Positives = 247/500 (49%), Gaps = 65/500 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+     N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQNLIIYNTLTRHKELFKPQHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      I    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQHYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD     N   YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKEILNNGYAYESNGSIYFDVVKYNNDHRYGILSG 172

Query: 168 RKIDEQKMGTR----VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAM 222
           R + +    +R    V EK H+    DF LWK++ P     W SPW  G PGWH EC+AM
Sbjct: 173 RNLTDLINNSRELQGVSEKKHQ---VDFALWKKAQPEHIMRWPSPWSVGFPGWHCECTAM 229

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS 
Sbjct: 230 GRKYLGSHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSL 288

Query: 283 GNFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAE 331
           GNFIT+ +             +P+ IR  +L  HYR  +DF+           +RL  A 
Sbjct: 289 GNFITLEQFFTGNHASLTQAYSPMTIRFFILSAHYRGTVDFSNEALEAAQKGYERLMNAF 348

Query: 332 ILLSKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQAL------------HKLA 372
             L + P +          V         A+ +DL T   I  L            HK  
Sbjct: 349 DDLERVPVSDHCDAETQQFVKNFRQRCYDAMNDDLQTPLVISYLFEACHLINTLLDHKTT 408

Query: 373 RESTKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KKFSS 427
            +S   H+L       A ++LG++  K   N+    A  K+V   L L       K +++
Sbjct: 409 IDSDSLHELSEAMKLFAFNLLGLKNEKGDNNEAREEAYGKVVDMVLDLRAKAKADKDWAT 468

Query: 428 ADYIRKQLESKGFILEDYKN 447
           +D IR  L   GF ++D K+
Sbjct: 469 SDKIRDALSEAGFEVKDTKD 488


>gi|149280305|ref|ZP_01886427.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149228994|gb|EDM34391.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 486

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/488 (34%), Positives = 245/488 (50%), Gaps = 52/488 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL RK   F+ ++  N+ +YVCGPTVY   H+GN R  I FD+++R L+Y 
Sbjct: 1   MNTGLQLYNTLTRKKEVFEPLNAPNVGLYVCGPTVYSDVHLGNCRTFISFDLIFRYLKYS 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           DDK  +RA+ E    P+      I  K T  F   
Sbjct: 61  -GYK-VRYVRNITDAGHLEGDRDEGDDKFAKRAKLEQLE-PME-----IVQKYTLGFHDV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
                 L P+ +P AT HI + I +I+ II +G+AYEA+  + FD    S   NY   + 
Sbjct: 113 LRMFNTLPPSIEPTATGHIIEQIEMIKEIISNGYAYEADGTVYFDVEKYSKSYNYTILTN 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +++    TR +  +  K+   DF LW ++ P     W SPWG G PGWHIECSAMS+ 
Sbjct: 173 RNLEDMLANTRELGGQDQKRGRLDFALWIKAKPETLMRWASPWGEGFPGWHIECSAMSAK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           YLG+ FDIHGGG+DL   HH NEIAQS  C+ +  + A  W+H   L + G +MSKS GN
Sbjct: 233 YLGEEFDIHGGGMDLAATHHTNEIAQSEACSHK--QPAKYWMHTNMLTVNGARMSKSAGN 290

Query: 285 FITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
                +L +          +P+ ++  ML  HYR  +DF+           +RL  A  L
Sbjct: 291 GFLPEQLFKGDHVLLEKGFSPMTVKFFMLQAHYRSTLDFSNEALDASEKGFRRLMNAVSL 350

Query: 334 LSKWPQTSTSKGIIDPAV---LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA- 389
           L K   +  S   I P     + A+ +D N+   I  L +  R     +D     +A++ 
Sbjct: 351 LDKLVPSEASDFDIRPIAENCVKAMNDDFNSPVVIAELFEAVRIINTVYDGKGRISAASL 410

Query: 390 ---------HILGIEVCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                     +  I   K+  + N+ +   ++ ++  R    + K ++++D IR  L+S 
Sbjct: 411 EELKKLMNDFVFEIFGLKDEDSSNVELNSVLDMVIDLRKTAKENKDYATSDKIRLGLQSM 470

Query: 439 GFILEDYK 446
           G  L+D K
Sbjct: 471 GIQLKDSK 478


>gi|323453109|gb|EGB08981.1| hypothetical protein AURANDRAFT_37286 [Aureococcus anophagefferens]
          Length = 660

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 163/484 (33%), Positives = 230/484 (47%), Gaps = 70/484 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           K ++ IYN+L R    F  +DP    I MYVCGPTVYD AH+G+AR  + FDV+ R+LR 
Sbjct: 24  KPQLMIYNSLTRSKVPFVPMDPLGKVITMYVCGPTVYDAAHLGHARTYLQFDVMRRILRD 83

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             G   V YV N+TD+DDKII R+ +   S         +  +    F++D T L    P
Sbjct: 84  ALGYD-VNYVMNVTDVDDKIIMRSAERGVSP------ETLAREWEHAFLEDMTSLGVERP 136

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSF------SRRK 169
           T  PR T ++P+++  ++ I+ +G AY     + FDT +      +YG        S   
Sbjct: 137 TSMPRVTEYVPEIVAFVEKIVANGFAYADQGSVYFDTVAFGKAGYDYGKLVPESIGSAEL 196

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-- 227
           + E +    +     KK+P DF LWK S P EP W SPWG GRPGWHIECSAM  + +  
Sbjct: 197 MAESEGKLGILLGGGKKDPRDFALWKASKPGEPTWPSPWGDGRPGWHIECSAMIDNTIGS 256

Query: 228 ------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                     DIHGGG+DL FPHH+NE+AQ       ++T N + H G L++ G KMSKS
Sbjct: 257 GGVGGAAGCIDIHGGGVDLRFPHHDNELAQGEAFCACKQTVNYFAHTGHLHIRGLKMSKS 316

Query: 282 NGNFITINELLETKKFGGRSWPAPV----IRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
             NFITI + L      G     PV    +RL   +  Y  P D++   L  A ++  K+
Sbjct: 317 LKNFITIGQAL--AGLEGVEGSEPVHPRTMRLMFCLVSYNAPCDYSDNMLANARVVEKKF 374

Query: 338 -----------------PQTSTSKGIIDPAVLSAL-----------YNDLNTVSAIQALH 369
                            P +       D  +L+AL            +D +T  A+ AL 
Sbjct: 375 KEYFLNVAAALRPLDADPDSRQKLCAEDKELLAALKKAQDTVYARFLDDFDTPGAVLALQ 434

Query: 370 KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
            L   ++     L  F+A      +  C   L      A  + V E L LL ++   + D
Sbjct: 435 TLVDTTSA---YLQKFDAKQASRAVP-CSLAL-----CATARYVGETLDLLGLEGLCADD 485

Query: 430 YIRK 433
            +R+
Sbjct: 486 VLRR 489


>gi|261337996|ref|ZP_05965880.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277500|gb|EFA23354.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 550

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 167/521 (32%), Positives = 252/521 (48%), Gaps = 100/521 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGE 63
           +K+Y+T    +++F+ I P  + +YVCG TV    HIG+ R  + FD++ R   R  Y  
Sbjct: 40  LKLYDTASHTVSQFEPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDIIRRWFERLGY-- 97

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++      S               ++F K    L    PT++P
Sbjct: 98  -QVTFVRNVTDIDDKILDK------SAAAGQQWWQRAYLYEREFTKAYDELGVEPPTYEP 150

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRK------- 169
           RAT H+  M+ LIQ II +GHAY   +E       + FD +S P+YG  + +K       
Sbjct: 151 RATGHMMDMVALIQRIIDNGHAYVVRDEQGNPTGNVYFDVASWPHYGELTHQKQSEPGAQ 210

Query: 170 -------IDE-----QKMGTRVP----EKYH----------KKNPADFILWKR---STPM 200
                  +DE       MG  V     +KY+          K +P DF LWK    + P+
Sbjct: 211 IDAVDVELDEAARVADAMGPSVDTAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDTDPV 270

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           +  W +P+G GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+C A     
Sbjct: 271 DARWHTPFGEGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTCAAGY--D 328

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
           +A  W+H+ ++  +G KMSKS GN +++  +L          PA V+R A+    YR  +
Sbjct: 329 SAARWMHSAWVTAKGEKMSKSLGNGLSVPVVLAEH-------PAWVVRYALGGVQYRSML 381

Query: 321 DFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAV-----------------LSALYNDLNTV 362
           +++ Q L EA     +     S ++ ++   +                  +A+  D+N  
Sbjct: 382 EWSDQTLAEATAAYERVTNFISRAEDVLGEQIDRDQIVAVGADDLPIDFTNAMNEDINVS 441

Query: 363 SAIQALHKLAR----------ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
            A+ A+    R          ++ +  + L    A    LG++   E   +  S A  ++
Sbjct: 442 GALAAIFTAIRNGNALMDANADAAQVRESLLQVRAMLDTLGLDPEAEPWAQETSNAANEV 501

Query: 413 VQERLILL---------KMKKFSSADYIRKQLESKGFILED 444
           + +RLI           K K F++AD IR  L + G  +ED
Sbjct: 502 L-DRLIATQLEARAEARKAKDFATADAIRDALAAAGITIED 541


>gi|326335690|ref|ZP_08201876.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692119|gb|EGD34072.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 494

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 165/495 (33%), Positives = 246/495 (49%), Gaps = 58/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KI+N+L  +   F  +  +++ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MNHQLKIFNSLTGEKEVFVPLHANHVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRALKFL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           +D+ ++++R E    P+      I  K T  F K 
Sbjct: 61  -GYK-VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLE-PME-----IVQKYTVDFHKV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFS 166
                 L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  S
Sbjct: 113 LEIFNLLPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNRRGLNYGELS 172

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
           RR I+E    TR +  +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+
Sbjct: 173 RRNIEELFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMST 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL FPHHE EIAQ   A   E     W+H   L + G++MSKS GN
Sbjct: 233 KYLGNQFDIHGGGMDLKFPHHECEIAQG-KAGHGESPVRYWMHANMLTMNGQRMSKSTGN 291

Query: 285 FITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
           +I   +L+     F  + +   V+R   +  HYR  +D +            RL EA   
Sbjct: 292 YILPMQLVSGNNTFFEKPFAPAVVRFCFMQAHYRSVLDISNEAMLAAERGFARLMEAMKT 351

Query: 334 LSKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQALHKLAR------------E 374
           +++   TS +   +   +         AL +D N+   I  L +  +             
Sbjct: 352 INELTPTSNTPTALTTMIENWKDKCYDALLDDFNSPMLIAHLFEAVKWIFQVKNDEEKIS 411

Query: 375 STKNHDLLPIFNASAH-ILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYI 431
           + +  +L  + NA    +LG++  ++  N N  +   ++ L+  R      K ++ +D I
Sbjct: 412 AAELKELQTLMNAFVFDVLGLQSEEQTNNYNDKLDGVLQLLINMREEARANKDWTLSDKI 471

Query: 432 RKQLESKGFILEDYK 446
           R +L + G  L+D K
Sbjct: 472 RNELLTIGIQLKDGK 486


>gi|292609692|ref|XP_682732.4| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 566

 Score =  241 bits (614), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 141/335 (42%), Positives = 191/335 (57%), Gaps = 23/335 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  YN+L +K              Y CGPTVYD AH+G+A   + FD+L R+L   +G  
Sbjct: 54  VTAYNSLTKKKEPLILSQEKIATWYSCGPTVYDHAHLGHACSYVRFDILQRILSRLFGIN 113

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V  ITDIDDKII+R+ +E+ S PI      +   + ++F KD   L  L P    R
Sbjct: 114 -VIHVMVITDIDDKIIQRSLEENIS-PIT-----LARMHEEEFKKDMLALRVLPPVVYMR 166

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
            T +IPQ+I  I+ II +GHAY  +   + F+T SI + YG       +  + G +    
Sbjct: 167 VTENIPQIIAFIERIIGNGHAYVTSQGNVYFNTKSISHRYGKLVNLGGNAGEQGVQ---- 222

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+N  DF LWK S P EP WESPWG+GRPGWHIECS ++S   G   DIH GG+DL F
Sbjct: 223 -DKENSRDFALWKASKPFEPYWESPWGQGRPGWHIECSTIASSVFGHQLDIHSGGIDLAF 281

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS    + E+  N ++H+G L+L+G   KMSKS  N++TI + L        
Sbjct: 282 PHHENEIAQSEAYHQCEQWGNYFLHSGHLHLKGSVEKMSKSLKNYVTIKDFLA------- 334

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           S+ A   RL  L+T YR  ID++   + EA+  LS
Sbjct: 335 SYTANEFRLFCLLTKYRSAIDYSDASMNEAQSTLS 369


>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
          Length = 400

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/400 (38%), Positives = 211/400 (52%), Gaps = 73/400 (18%)

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L CL P+ +PR ++H+ ++I +I+ I+ +  AY    ++ F   + P YG  S RK+D+ 
Sbjct: 4   LQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKLDDN 63

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G RV     K+NPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDI
Sbjct: 64  RAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDI 123

Query: 234 HGGGLDLIFPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           HGGG DLIFPHHENEIAQS   CC    + T N WIHNGF+N+  +KMSKS GNF+TI +
Sbjct: 124 HGGGEDLIFPHHENEIAQSRAACC----DSTINYWIHNGFVNVNSQKMSKSLGNFVTIRK 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           ++E        +    +R+ +L THYR PI++T+++L  A   L    QT      I   
Sbjct: 180 VIEM-------YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEEICQH 232

Query: 351 VLSALYNDL--NTVSAIQALHKLARESTKNHDL------------LPIFNASAH------ 390
             S   N L  NT++ IQ LH    E++ + DL            L + N   H      
Sbjct: 233 QQSNTGNPLPANTLNYIQKLHD-EFETSMSDDLHTSVALAAMSEPLKVMNDLLHTRKGKK 291

Query: 391 --------------------ILGI------EVCKEHLNKNI---SIAIEKLVQ---ERLI 418
                               +LG+      E  ++  +K +   SI  E +VQ   ER  
Sbjct: 292 QDKRLESLSALEEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTA 351

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K K++  +D IRK+L + G  L D   PD     T W+
Sbjct: 352 ARKAKQYEKSDEIRKELAAVGIALMD--GPDG----TTWR 385


>gi|168700079|ref|ZP_02732356.1| cysteinyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 519

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/328 (41%), Positives = 192/328 (58%), Gaps = 27/328 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL RK   F       + MYVCGPTVY  +HIG+    ++FD + R L Y  G K
Sbjct: 3   LQVYSTLTRKKEPFHKQPGDTVTMYVCGPTVYKPSHIGHMVGPVIFDTVKRYLTYL-GYK 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK--DTTRLACLAPTHQ 122
            V +V NITD+DDK+I RA+++  ++P       + +K T+ +        +A  +P   
Sbjct: 62  -VKWVVNITDVDDKLIGRAQEQKTTVPE------LAAKMTEDYFACLKALNIAVSSPDGI 114

Query: 123 ---PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
              PRAT HI  MI +IQ++I   HAYE ++ + FD S   +YG  + R  ++ + G R+
Sbjct: 115 DVFPRATQHIGGMIQVIQDLIKKDHAYEVDDGVYFDVSKDADYGKLTNRDPEQMEAGARL 174

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPW--GRGRPGWHIECSAMSSHYLGKVFDIH 234
                K+NP DF LWK S P EP    ++SP+  GRGRPGWHIEC+ M+   LG+  DIH
Sbjct: 175 EPNPKKRNPGDFALWK-SKPGEPAEVQFDSPFKCGRGRPGWHIECTCMAIKELGETLDIH 233

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGGLDL FPHHENE+AQS      +  A +W+HNG L L+  KM+ S GN + + + L  
Sbjct: 234 GGGLDLQFPHHENELAQSESWTG-KPFARVWMHNGLLKLKSGKMAGSLGNVLNVADAL-- 290

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           K  GG +     +R  +L THYR PID 
Sbjct: 291 KAVGGGA-----LRFFVLNTHYRSPIDL 313


>gi|154498448|ref|ZP_02036826.1| hypothetical protein BACCAP_02437 [Bacteroides capillosus ATCC
           29799]
 gi|150272516|gb|EDM99701.1| hypothetical protein BACCAP_02437 [Bacteroides capillosus ATCC
           29799]
          Length = 469

 Score =  240 bits (613), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 168/484 (34%), Positives = 238/484 (49%), Gaps = 49/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L     EF    P  + MY CGPTVY FAHIGN R  I+ DVL + LRY     
Sbjct: 1   MKLYNSLSHTKEEFVPHVPGKVSMYTCGPTVYHFAHIGNLRSYIMEDVLEKFLRY--DGY 58

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT V NITD+          +DK+++ A++EH ++        I    T  F  D  +L
Sbjct: 59  DVTRVMNITDVGHLASDADTGEDKMVKGAQREHKTV------MEIAKFYTDAFFSDCKKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT  I   I +I +++  G+AY A   I FDTS +  Y  F+    ++  
Sbjct: 113 NIKYPDVVQPATGMIDDYIKVITSLLEKGYAYHAGGNIYFDTSKLKQYYVFNDHDEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW   +  E     W+SPWG G PGWHIECS +S  YLG+
Sbjct: 173 VGVRDSVEEDQNKRNKADFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMKYLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS  A         W+H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQS-EAYLGHPWCKYWMHVHHLNTSNGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGI 346
            LLE K +        V RL  L +HYR+ + F+ + L  A+    K      +    G 
Sbjct: 292 -LLEEKGY-----DPLVYRLFCLQSHYRKGLVFSWENLDNAKAAYDKLVARVAALGEDGD 345

Query: 347 IDP--------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC- 397
           +D         A + A+ NDLNT   + A++   +  T +     +      +LG+++  
Sbjct: 346 VDQAAVDAARAAFIEAVGNDLNTSLGVTAVYDALKADTNDATKRAVIADFDKVLGLDLLG 405

Query: 398 -------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  KE      +  IE L+ +R    K K ++ AD IR QL++ G  ++D  N   
Sbjct: 406 RAAALKEKESAPVEGAEEIEALIAQRAQAKKEKNWAQADAIRDQLKAMGVEIKDTPNGVE 465

Query: 451 GQRM 454
            +R+
Sbjct: 466 WKRI 469


>gi|152992414|ref|YP_001358135.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225309|sp|A6Q8G9|SYC_SULNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151424275|dbj|BAF71778.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 465

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 164/472 (34%), Positives = 239/472 (50%), Gaps = 49/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++++++    F+ I      +YVCGPTVYD AH+G+AR  + FD+L R L+   G K
Sbjct: 1   MQIFDSVQKTKVTFEPIREGEASIYVCGPTVYDDAHLGHARSSLAFDLLSRTLK-ALGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V   +N TDIDDKII++  +   S      +  ITS   Q+++ +  +L       +P+
Sbjct: 60  -VIMAKNFTDIDDKIIKKVEETGKS------MQEITSYYIQRYLDEMEQLGVQRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  +  +IQ +I    AY  +N ++ FDTS   +YG  S  K+ +    +RV    
Sbjct: 113 ATESLDAIEQMIQTLIDKDFAYVVSNGDVYFDTSKDSHYGDIS-HKVSDDDTQSRVEHNS 171

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYL---GKV-FDIHGGGL 238
            K+NP DF LWK     E   + +P+  GRPGWHIECSAM   Y    G+   DIHGGG 
Sbjct: 172 EKRNPRDFALWKACKGEEDICFGAPFSSGRPGWHIECSAMIEKYFKGNGQYSIDIHGGGA 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQS CA   E  A  W+HNGF+ + G KMSKS GN   + + LE   +G
Sbjct: 232 DLLFPHHENEAAQSRCATGHE-LAKYWMHNGFVQINGEKMSKSLGNSFFLKDALEV--YG 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDP 349
           G      V+R  +   HYR   +F  + L  A+  L K           + ST       
Sbjct: 289 GE-----VLRYYLNSVHYRNDFNFNEEDLQTAKKRLDKLYRLKKRVLPGKASTVNKAFKQ 343

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--SAHILGIEVCKEHL------ 401
           A+L+A+ +DLN   A+  + ++  E+ +  D  P   A     I  IE     L      
Sbjct: 344 ALLNAMSDDLNISIALAVIDEMIAETNEKLDTDPKNKALKKETIANIEFIDTLLGFGGKE 403

Query: 402 ---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                    ++ +   IE L+QER    K K F+++D IR +L   G  + D
Sbjct: 404 PFSYFQIGVDEALKEKIEILLQERTEAKKAKDFATSDAIRNELIDMGISIMD 455


>gi|308235882|ref|ZP_07666619.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311115022|ref|YP_003986243.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946516|gb|ADP39220.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 529

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 169/523 (32%), Positives = 247/523 (47%), Gaps = 100/523 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYG 62
           ++++YNT     + F  + P ++ MYVCG TV    HIG+ R  I FDV+ R LLR  Y 
Sbjct: 15  RLRLYNTATHNTSGFTTVTPGHVGMYVCGATVQSSPHIGHIRAAIAFDVVRRWLLRLGY- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+VRN+TDIDDKII++A +   +      I        ++F K    L  + PT +
Sbjct: 74  --TVTFVRNVTDIDDKIIKKASENGQTWWQRAYIY------EREFTKAYNTLGVMPPTVE 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNE----IIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT HI  M+ LIQ +I  GHAY   +AN      + F   S  +YG+ + +  +    
Sbjct: 126 PRATGHINDMVELIQRLINRGHAYAITDANGNPTGNVYFSVPSWQDYGALTHQNGNSDGS 185

Query: 176 GT----RVPEKYHKKNPAD----------FILWKRSTPME---PGWESPWGRGRPGWHIE 218
            +       +KY+  +PAD          F LWK     +     W +P+G GRPGWHIE
Sbjct: 186 NSDDKSSKADKYNPVDPADASPDKHDARDFALWKAPCDFDQKDARWNTPFGAGRPGWHIE 245

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           CSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A    K+AN+W+H+ ++  +G KM
Sbjct: 246 CSAMSHRYLGDSFDIHGGGLDLRFPHHENEMAQTLAAGW--KSANVWMHSAWVTSKGEKM 303

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI------ 332
           SKS GN +++  +L  K        A V+R A+    YR  ++++ Q LTEA+       
Sbjct: 304 SKSLGNGLSVPSVLAQKS-------AWVVRYALGGVQYRAMLEWSDQSLTEAQSAYDRIS 356

Query: 333 --------LLSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQA-----------LH 369
                   ++   P  +  + +    +      A+ +D+N   A+ A           L 
Sbjct: 357 NFLERANRVIENQPDYAEVQSVDADNLPKDFTKAMNDDINVSGALAAIFTAIRSGNALLD 416

Query: 370 KLARESTKNH-------------------DLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
             A+   +N                    D L +   S     +    + L  N   + E
Sbjct: 417 DYAQNQNENQSNGIKSLIKTCVLQVRAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAE 476

Query: 411 KLVQERLILLKM---------KKFSSADYIRKQLESKGFILED 444
             V E LI  ++         K F+ AD IR  L + G ++ED
Sbjct: 477 HKVLESLIANQLEQRAIARAAKDFARADAIRDSLTAAGVVIED 519


>gi|311106733|ref|YP_003979586.1| cysteinyl-tRNA synthetase 1 [Achromobacter xylosoxidans A8]
 gi|310761422|gb|ADP16871.1| cysteinyl-tRNA synthetase 1 [Achromobacter xylosoxidans A8]
          Length = 467

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 171/474 (36%), Positives = 235/474 (49%), Gaps = 43/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           + +Y+T  R +  F  I   ++ MY CGPTVYD AHIGN R  +  D+L R L+R  Y  
Sbjct: 3   LALYDTWSRTVRSFTPIHAGHVGMYCCGPTVYDHAHIGNLRTYVFEDILRRVLIRNGYE- 61

Query: 64  KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             V +V NITD+     D      + E  S    ++   I  + T+ FV D   L  L P
Sbjct: 62  --VRHVVNITDVGHLTSDADEGEDKMEKGSRRTGESAYAIAQRYTEAFVADWQALNLLEP 119

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T   RAT+HI + I  I  +   G+ Y  N+ + FDTS   +YG  +R      + G RV
Sbjct: 120 TVWCRATDHIAEQIAFIGQLDRSGYVYRTNDGLYFDTSKQDDYGFLARLDRAGLQAGKRV 179

Query: 180 PEKYHKKNPADFILWKRS-----TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                K+N  DF LWK S       ME  W+SPWGRG PGWHIECSAMS+ +LG  FDIH
Sbjct: 180 ALGA-KQNITDFALWKFSPEGVVRQME--WDSPWGRGFPGWHIECSAMSAKHLGIWFDIH 236

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELLE 293
            GG D I  HH NEIAQ+  A    + AN WIH  FL L    KMSKS+G+F+ +  L  
Sbjct: 237 CGGEDHIAVHHSNEIAQTQAAHGT-RLANFWIHGHFLTLNADSKMSKSSGDFVRLQTLRS 295

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQTSTSKGI 346
                 R+      R   +  HYR  + F+   L  A+        L S WP      G 
Sbjct: 296 ------RNIDPLAYRYLCMTAHYRSKLHFSWASLGAAQTALNRLRHLYSGWPD----GGR 345

Query: 347 IDPAVL----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH-L 401
           IDP       + L +DLN   A+  L +L +       L    ++   +LG+ +   + +
Sbjct: 346 IDPDFAARFNAELNDDLNLPRALAVLWELVKSELPPATLKATVDSFDFVLGLGLRDWNPV 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +I  +I  L+ ER    + K +  AD IRK L ++G+ +ED    ++GQR+T
Sbjct: 406 ASDIPESIRVLLGERAQAREAKNWVKADEIRKMLNTRGWRVED---GNDGQRLT 456


>gi|325287202|ref|YP_004262992.1| cysteinyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322656|gb|ADY30121.1| cysteinyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 494

 Score =  240 bits (612), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 173/490 (35%), Positives = 243/490 (49%), Gaps = 54/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + IK+YN+L  K  EF+ I+  +I MYVCGPTVY   H+GN R  + FD+++R  ++  G
Sbjct: 7   QTIKVYNSLSGKKEEFKPINDGHIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +DKI ++AR E    P+      +  + T  F     
Sbjct: 66  YK-VRYVRNITDAGHLVDDADEGEDKIAKKARLEQIE-PME-----VVQRYTVDFHNTLQ 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
           +   L P+ +P AT HI + I +I+ II  G AYE N  + FD    +   +YG  S RK
Sbjct: 119 KFNFLPPSIEPTATGHIIEQIEIIKEIIEKGFAYEVNGSVYFDVVEFNKTNDYGILSGRK 178

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  KKNP DF LWK++ P     W SPWG G PGWH+EC+AMS+ YL
Sbjct: 179 LEDMIANTRELAAQSDKKNPQDFALWKKAEPEHIMRWPSPWGDGFPGWHLECTAMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DL FPHHE EIAQ+  ++      N W+H   L L G+KMSKS  N I 
Sbjct: 239 GETFDIHGGGMDLKFPHHECEIAQAQASNG-SAPVNYWLHANMLTLNGKKMSKSTDNNIY 297

Query: 288 INELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
            NE+         +++    +R  M+  HY   +D +   L  +E    K  +  TS   
Sbjct: 298 PNEIFSGDNNILSKAFSPSAVRFFMMQAHYTSILDLSNDALLASEKGYLKLMEAITSLKA 357

Query: 347 IDPA-------------VLSALYNDLNTVSAIQALH---------KLARESTKNHD---L 381
           I+                  A+ +D N+   I  L          K  +E+    D   L
Sbjct: 358 IETGSKTEFDVAAWQQKCYDAMNDDFNSPILIAHLFEAVKHINLIKDGKETITKEDKELL 417

Query: 382 LPIFNASA-HILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               N  A  ILG+    E  N N   +   +  L+Q R      K F+ +D IR QL +
Sbjct: 418 ENTLNTFAFDILGLTGVNEDANGNSEKLEEVVNLLIQLRNDARSNKDFALSDQIRDQLLA 477

Query: 438 KGFILEDYKN 447
            G  L+D K+
Sbjct: 478 IGIQLKDGKD 487


>gi|227495626|ref|ZP_03925942.1| cysteine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226830858|gb|EEH63241.1| cysteine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 445

 Score =  239 bits (611), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 157/456 (34%), Positives = 229/456 (50%), Gaps = 72/456 (15%)

Query: 45  RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
           R  + FD L R L+   G K VTYVRNITDIDDKI+ +      S  + +      +K  
Sbjct: 2   RSAVAFDTLIRWLKRN-GMK-VTYVRNITDIDDKILRK------SAEVGEPWWAWAAKFE 53

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG 163
           ++F      L  L  T +PRAT HI   + LI  +I  GHAY +    + FD  S+ +YG
Sbjct: 54  REFSAAYDALGLLPATFEPRATAHITDQLNLINRLIERGHAYADGQGNVYFDVHSLDDYG 113

Query: 164 SFSRRKI-------DEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRP 213
           S +R+ +       DE ++ +    +  K++  DF LWK + P EP    W+SPWGRGRP
Sbjct: 114 SLTRQDLANMRTTEDESQIDSAT--EAGKRDTRDFALWKSAKPTEPTTAAWDSPWGRGRP 171

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWH+ECSAMS  YLG+ FDIHGGG+DL FPHHENE AQS  A      AN+W+HN ++ L
Sbjct: 172 GWHLECSAMSERYLGETFDIHGGGIDLRFPHHENEQAQSHGAGW--GFANLWVHNAWVTL 229

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI- 332
           +G KMSKS GN + + ++LET        PAPV+R A+   H+R  +++  + L  A+  
Sbjct: 230 KGEKMSKSLGNSLVVADILETV-------PAPVLRFALGTVHHRSTVEYGEETLAAAQAA 282

Query: 333 -------------LLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAIQALHK---- 370
                        LL++      S+G +       A  +A+ +DLN   A+ ++++    
Sbjct: 283 WDRLAGFVVRATQLLAENQVAEISEGELAQHPLPEAFAAAMNDDLNVAGALASVYERLKA 342

Query: 371 -----LARESTKNHDLLPIFNASAHILGIEVCKEHL----------NKNISIAIEKLV-- 413
                 A ++      L    A   ILG++                N     A++ LV  
Sbjct: 343 GNSALTAGDTETVRVALCDVRAMLSILGLDPASTQWAPFVFGNGSSNNGAQHALDTLVSA 402

Query: 414 --QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             +ER      K +  AD +R +L   G ++ED  +
Sbjct: 403 VIEERAQARADKDWGRADALRDRLTVAGIVVEDSAD 438


>gi|167584729|ref|ZP_02377117.1| Cysteine--tRNA ligase [Burkholderia ubonensis Bu]
          Length = 467

 Score =  239 bits (611), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 161/467 (34%), Positives = 231/467 (49%), Gaps = 30/467 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R +  F AI   ++ +Y CGPTVYD AHIGN R  +  D+L R+L     E 
Sbjct: 3   LALYDTWSRTLRPFTAIHDDHVGLYCCGPTVYDHAHIGNLRTYVFEDILRRVLTRNGHE- 61

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V +V NITD+     D      + E  S     +   I +  T  F  D   L  L P+
Sbjct: 62  -VRHVVNITDVGHLTSDADEGEDKLEKGSRRTGRSAWEIAAHYTDAFKADWRALNLLEPS 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
              RAT+HI + I  I+ I   G+ Y  ++ + FDTS   +YG  +R      + G RV 
Sbjct: 121 IWCRATDHIAEQIAFIEEIERAGYVYRTDDGLYFDTSKQDDYGFLARLDRAGLQAGKRVA 180

Query: 181 EKYHKKNPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               K+N  DF LWK S P E      W+SPWGRG PGWHIECSAMS+ YLG  FDIH G
Sbjct: 181 VGA-KRNATDFALWKFS-PAEVRRQMEWDSPWGRGFPGWHIECSAMSAKYLGVWFDIHCG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G D +  HH NEIAQ+  A    + AN W+H  FL L+  KMSKSNG+F+ +  L +   
Sbjct: 239 GEDHVAVHHSNEIAQTEAAHGT-RLANFWMHGHFLTLDATKMSKSNGDFVRLQTLRD--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQTSTSKGIIDP 349
              R+      R   L  HYR  ++F    L  ++        L S WP   ++      
Sbjct: 295 ---RNVDPLAYRYLCLTAHYRSKLNFNWTSLDASQTALNRLRQLYSGWPDGGSADAAFVA 351

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN-KNISIA 408
              + +  DLN   A+  L +L + +     L         +LG ++     +  ++  A
Sbjct: 352 RFDAEVDQDLNMPRALAVLWELVKSNLPPATLKATMENFDAVLGFKLRDWRPSASDVPEA 411

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +  L+ ER      + ++ AD IR+ L+++G+ +ED K   +GQR+T
Sbjct: 412 VRALLGERERARAERNWARADEIRETLKARGWQIEDGK---DGQRVT 455


>gi|149057584|gb|EDM08827.1| rCG43187, isoform CRA_a [Rattus norvegicus]
          Length = 549

 Score =  239 bits (611), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 148/405 (36%), Positives = 213/405 (52%), Gaps = 54/405 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  K           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTSVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N + + + S   ++F +D   L  L PT   
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTVYL 148

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  IQ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 149 RVTENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKL----VNTVPSATAEPV 204

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+DL 
Sbjct: 205 DSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLA 264

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS    + ++  N ++H+G L+++G+  KMSKS  N+ITI + L+T     
Sbjct: 265 FPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLQT----- 319

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------- 336
             +   V RL  L T+YR  ID++   L EA  LL                         
Sbjct: 320 --FSPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPVGE 377

Query: 337 ---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
              W + +++K     AV +AL ND +T  A+ ++  L   + + 
Sbjct: 378 DVLWERLASTK----KAVKAALANDFDTPRAVNSILDLVHHANRQ 418


>gi|305664986|ref|YP_003861273.1| cysteinyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707398|gb|EAQ99643.1| cysteinyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 493

 Score =  239 bits (611), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 161/489 (32%), Positives = 246/489 (50%), Gaps = 53/489 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++K+K+ N+L  K  +F+ I+  +I MYVCGPTVY   H+GN R  + FD+++R  ++  
Sbjct: 6   EQKLKVSNSLTGKKQDFEPINEGHIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHL- 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD           +DKI ++AR E    P+      +  + T  F    
Sbjct: 65  GYK-VRYVRNITDAGHLVDDADEGEDKIAKKARLEKIE-PME-----VVQRYTVDFHNIL 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRR 168
            +   L P+ +P AT HI + + +I+ I+    AYE N  + FD         YG  S R
Sbjct: 118 DQFNFLPPSIEPTATGHIIEQLEIIKEILKKEFAYEVNGSVYFDVKKFNESFEYGKLSGR 177

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
           K+++    TR +  +  K++P DF LWK++ P     W SPWG G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDMIANTRELTAQSDKRSPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DL FPHHE EIAQ+  ++      N W+H   L + G+KM+KS GN I
Sbjct: 238 LGETFDIHGGGMDLKFPHHECEIAQAEASNG-HSPVNYWLHANMLTMNGKKMAKSTGNNI 296

Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA----- 330
              E+   K     +++   V+R  M+  HY   +D +           QRL EA     
Sbjct: 297 LPGEIFTGKNDILSKAFTPSVVRFFMMQAHYTSILDLSNDALLASEKGYQRLMEAVENLD 356

Query: 331 --------EILLSKWPQ---TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                   +  + +W Q    + +     P +++ L+  +  ++ IQ  ++    S K  
Sbjct: 357 GLDAGGKSDFDVIEWRQKCYDAMNDDFNTPILIANLFEAVKHINLIQEGNESISISDKEL 416

Query: 380 DLLPIFNASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               +      +LG+E   E    +  +   +E L+Q R      K F ++D IR QL +
Sbjct: 417 LQQTMKGFVFEVLGLEQKNESGQDSNKLQGVVELLIQLRNEARSNKDFVTSDKIRDQLLA 476

Query: 438 KGFILEDYK 446
            G  L+D K
Sbjct: 477 LGIQLKDGK 485


>gi|163786101|ref|ZP_02180549.1| cysteinyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877961|gb|EDP72017.1| cysteinyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 493

 Score =  239 bits (610), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 172/489 (35%), Positives = 244/489 (49%), Gaps = 53/489 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + IKIYNTL  +   F  I   ++ MYVCGPTVY   H+GN R  + FD+++R   +  G
Sbjct: 7   QHIKIYNTLSGEKELFVPITEGHVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYFNHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +DKI ++AR E    P+      I  + T  F     
Sbjct: 66  YK-VRYVRNITDAGHLENDDDVGEDKITKKARLEAIE-PME-----IVQRYTVDFHNVLN 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
               L P+ +P AT HI + I LI++II  G AY  N  + FD    +    YG  S+RK
Sbjct: 119 TFNFLPPSIEPTATGHIIEQIELIESIIDKGFAYVVNGSVYFDVHKYNESNAYGILSKRK 178

Query: 170 IDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR  + +  KKNP DF LWK++ P     W SPW  G PGWH+EC+AMS+ YL
Sbjct: 179 LEDLIHNTRTLDGQSDKKNPQDFALWKKAEPAHIMRWPSPWSDGFPGWHLECTAMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DL FPHHE EIAQ+  A + +     W+H   L L G +MSKS+GN+I 
Sbjct: 239 GEYFDIHGGGMDLKFPHHECEIAQNQAA-KGQDPVKYWMHANMLELNGARMSKSSGNYIN 297

Query: 288 INELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK 336
             ELL        + +   VIR  M+   Y+  +D T            RL +A  L+  
Sbjct: 298 PAELLSGNNDKMSKGYNPMVIRFFMMQASYKSVLDLTDAGLKAAEKGFNRLMDAINLIDN 357

Query: 337 WPQTSTSK---GIIDPAVLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLL 382
              + +S     +       A+ +D NT   I  L   A+            ++++ D L
Sbjct: 358 LKTSDSSSFDISVWKQKCYDAMNDDFNTPILIAHLFDAAKFINQIKDGSATVTSEDLDFL 417

Query: 383 --PIFNASAHILGI-EVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
              I   +  ILG+  V K+  N + ++ A+E L+  R      K F+ +D IR +L   
Sbjct: 418 KQTIETFTFDILGLTNVSKDDSNTDKLTGAVEILINLRKEARLNKDFALSDKIRDELAEA 477

Query: 439 GFILEDYKN 447
           G  L D ++
Sbjct: 478 GIQLNDSRD 486


>gi|57505460|ref|ZP_00371388.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016285|gb|EAL53071.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 454

 Score =  239 bits (609), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 156/446 (34%), Positives = 225/446 (50%), Gaps = 48/446 (10%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I MY+CGPTVYD AH+G+AR  I FD+L R+L    G K + + RN TDIDDKI+++ ++
Sbjct: 20  ITMYLCGPTVYDHAHLGHARSSICFDLLRRVL-LSLGRK-LYFARNYTDIDDKILKKMQE 77

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              S+        IT K    + +D   L  L P  +P+AT +I QMI LI ++   G  
Sbjct: 78  SGESLEQ------ITQKYIAHYERDMKNLRVLEPDLKPKATEYIKQMIELILHLQRQGFT 131

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           Y   + I FDTS   +Y S S+R  ++ +  TR+ E+  KKN ADF+LWK     E  + 
Sbjct: 132 YTLEDGIYFDTSKDKDYLSLSKRSFEDNQ--TRLNEQKEKKNEADFVLWKFD---EGFYA 186

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           +P+G+GRPGWH EC AM         DIH GG+DL FPHHENE AQ  CA   +  A+ W
Sbjct: 187 APFGKGRPGWHSECVAMIEALFKDSLDIHAGGVDLFFPHHENEAAQCRCAFN-KNLASHW 245

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +HNGF+N+ G KMSKS  N   I + L  K+F G +     +R  ++  HYR   +++++
Sbjct: 246 LHNGFVNINGEKMSKSLNNSFFIEDAL--KEFSGEA-----LRFYLMSVHYRAHFNYSLE 298

Query: 326 RLTEAEILLSKWPQTSTSKGI-------------IDPAVLSALYNDLNTVSAIQALH--- 369
            L+  +  L K  +      +             +   +L AL +DLN   A+       
Sbjct: 299 DLSLCKKRLDKLYRLKKRLDLNLLEDKPKKCERELSLTILQALQDDLNISKALALFDEFI 358

Query: 370 -----KLARESTKNHDLLPIFNASAHILGIEV------CKEHLNKNISIAIEKLVQERLI 418
                KL         L   F   A I G+         ++  +K     IE  + +R  
Sbjct: 359 ANANLKLDENKALKEGLREDFKELAFIFGVGFEDVILYFQQGFSKEQIAWIETQIAKRSE 418

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
             K K ++ AD +R+ L   G +L D
Sbjct: 419 AKKAKDYALADKLRQDLAEFGVVLLD 444


>gi|315453045|ref|YP_004073315.1| cysteinyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132097|emb|CBY82725.1| cysteinyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 474

 Score =  239 bits (609), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 158/480 (32%), Positives = 245/480 (51%), Gaps = 55/480 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IY++  ++    + +   ++++Y+CGPTVYD AH+G+AR  I FD+L R L     
Sbjct: 2   QAVYIYDSKTKQKQLLEPLVGHDVKIYICGPTVYDHAHLGHARSAIAFDLLRRTLE--QS 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V+N TDIDDKII +A QE  S       S ++++  + +  D   L    P  +
Sbjct: 60  GYVVEMVKNFTDIDDKIIAKAAQEGVS------TSALSARYIESYTADMQALGVQKPHLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT H+  M  +IQ ++  GHAY+ +++I  DT     YGS S    +E  + +R+ + 
Sbjct: 114 PKATAHLGAMFNIIQQLLDKGHAYQIDHDIYLDTHKDQAYGSLSGHIYNEADV-SRLEDN 172

Query: 183 YHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA-----MSSHYLGKVFDIHGG 236
             K++P DF LWK      + G+ESP+G+GRPGWH+ECS+     M+ H      DIH G
Sbjct: 173 PLKRHPQDFALWKSYKGESDVGYESPFGKGRPGWHLECSSMIFANMAYHDQAYQIDIHAG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENE  Q+ CA   ++ A  W+HNGF+N+ G KMSKS GN   + + L+   
Sbjct: 233 GSDLFFPHHENEACQTRCAFS-QELAKYWMHNGFVNISGEKMSKSLGNSFYVKDALKI-- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGII 347
                +   ++R  +L  HYR  + F  + L  ++  L K  +         T T     
Sbjct: 290 -----YDGEIVRNYLLGIHYRAVLHFNEEDLLASKKRLDKIYRLKKRALECATKTPPPSP 344

Query: 348 DP----AVLSALYNDLNTVSAIQAL-------HKLARESTKNH------DLLPIFNASAH 390
           +P    A L AL +DLN   A+  L       +++  ++TK         +L   +    
Sbjct: 345 NPNFQRAFLQALQDDLNISKALSVLEEHVHVCNEILDQATKQTRASMACAILEDLDYVNT 404

Query: 391 ILG------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LG      I   +  ++  +   IE+ +  RL   K K F+ AD IR+ L  +G +L D
Sbjct: 405 LLGLGGKDPIAYFQLGVDATLLAHIEEQIARRLEAKKAKDFALADRIREDLAHQGILLMD 464


>gi|322379889|ref|ZP_08054175.1| cysteinyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147684|gb|EFX42298.1| cysteinyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 475

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/488 (32%), Positives = 251/488 (51%), Gaps = 67/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I ++++  ++   F  +    +++Y+CGPTVYD++H+G+AR  IVFD+L R+L   
Sbjct: 1   MHPPIYLFDSHHKQKRPFVPLKAPKVKIYICGPTVYDYSHLGHARSAIVFDLLTRMLT-- 58

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+N TDIDDKII +A QE   + I D    ++ +    ++++   L  L PT
Sbjct: 59  LSGYSVEIVKNFTDIDDKIISKALQE--GVNITD----LSRRFIASYLEEMQALGVLRPT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P+A+ H+  +  +I+ ++  G+AY+     I  DT     YGS S   ++ + + +R+
Sbjct: 113 SEPKASEHLEAIEDMIKRLLEKGYAYQTKEGSIYLDTRLDSAYGSLSAHSLEAENV-SRI 171

Query: 180 PEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDI 233
            +   K +P DF LWK      + G+ S +G+GRPGWHIECSAM ++ L  +      DI
Sbjct: 172 EDNLEKHHPQDFALWKTYKGEGDLGYLSAFGKGRPGWHIECSAMIANTLAYLDEPYQIDI 231

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG DL FPHHENE  Q+ CA   ++ A  WIHNGF+N+ G+KMSKS GN   I + L+
Sbjct: 232 HGGGSDLFFPHHENEACQTRCAFN-QELAQFWIHNGFVNISGQKMSKSLGNSFYIKDALK 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTST 342
                   +   V+R  +L  HY   + F  + L   +  L K            P+ S 
Sbjct: 291 V-------YDGEVLRNYLLGVHYSAILHFNEEDLNSQKKRLDKLYRLKKRALEISPEKSK 343

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           S      A+L A+ +DLN   A+  L +  +ES ++ D     NAS+     + C + + 
Sbjct: 344 SNQNFQHALLQAMQDDLNISKALSILEEYLQESNQSLD-----NASSKT-NKKKCAQEIL 397

Query: 403 KNIS------------------IAIEKLVQERL---ILLKM-----KKFSSADYIRKQLE 436
           +N++                  + ++  +++++   IL +      K F+ AD IRK L 
Sbjct: 398 ENLTFIDQLLGLGGKDPTLYFQLGVDTALKDKITTQILRRQKAKEAKDFALADSIRKDLA 457

Query: 437 SKGFILED 444
            +G  L D
Sbjct: 458 QQGISLMD 465


>gi|300770934|ref|ZP_07080811.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762207|gb|EFK59026.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 488

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/491 (35%), Positives = 243/491 (49%), Gaps = 54/491 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + +YNT+ RK  +F  I PS + MYVCGPTVY   H+GN R  + FD+++R L  +
Sbjct: 1   MENNLVLYNTISRKKEKFNPIHPSMVGMYVCGPTVYSDVHLGNCRTFVSFDLIFRYL-LH 59

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           DDK  ++A+ E    P+      I  K T  F  D
Sbjct: 60  LGYK-VRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE-PME-----IVQKYTIGF-HD 111

Query: 111 TTRL-ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFS 166
             RL   L P+ +P AT HI + I +I+ II +G+AYE N  + FD        +Y   +
Sbjct: 112 VLRLFNTLPPSIEPTATGHISEQIEMIKQIIDNGYAYEVNGTVYFDVEKYVQKYDYTVLT 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            RK+++    TR +  +  K+   DF LW ++ P     W +PW  G PGWHIECSAMS+
Sbjct: 172 NRKLEDLLNNTRELGGQDEKRGRLDFALWIKAKPEHIMRWPAPWSTGFPGWHIECSAMSN 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL   HH NEIAQS   +     A  W+H   L + G +MSKS+GN
Sbjct: 232 KYLGAQFDIHGGGMDLAATHHTNEIAQSEACNHT-SPARYWMHTNMLTVNGARMSKSSGN 290

Query: 285 FITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
                EL         R +    +R  ML  HYR  +DF+           +RL  A  L
Sbjct: 291 GFLPQELFTGNHPLLERGYSPMAVRFFMLQAHYRSTLDFSNEALDAADKGFKRLMNAIAL 350

Query: 334 LSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH-- 379
           L+K   +  + G     I     +A+ +D N+   I  L ++ R        +ST N   
Sbjct: 351 LNKITPSKATSGFNLEDIRKNCYAAMDDDFNSPILIAELFEVVRIINSIYDGKSTINQKG 410

Query: 380 -DLLPIF--NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
            D L  F  +    ILG+         N+   +  ++  R    + K F+++D IR++L 
Sbjct: 411 LDELKAFMKDFVEDILGLNDDSNAGTDNMDELMNVIINIRNSAKQNKDFATSDRIREELS 470

Query: 437 SKGFILEDYKN 447
           S G  L+D K+
Sbjct: 471 SIGIQLKDSKD 481


>gi|322378637|ref|ZP_08053073.1| cysteinyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148944|gb|EFX43408.1| cysteinyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 475

 Score =  238 bits (607), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 157/488 (32%), Positives = 251/488 (51%), Gaps = 67/488 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I ++++  ++   F  +    +++Y+CGPTVYD++H+G+AR  IVFD+L R+L   
Sbjct: 1   MHPPIYLFDSHHKQKRPFVPLKAPKVKIYICGPTVYDYSHLGHARSAIVFDLLTRMLT-- 58

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+N TDIDDKII +A QE   + I D    ++ +    ++++   L  L PT
Sbjct: 59  LSGYSVEIVKNFTDIDDKIISKALQE--GVNITD----LSRRFIASYLEEMQALGVLRPT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P+A+ H+  +  +I+ ++  G+AY+     I  DT     YGS S   ++ + + +R+
Sbjct: 113 SEPKASEHLEAIEDMIKRLLEKGYAYQTKEGSIYLDTRLDSAYGSLSAHSLEAENV-SRI 171

Query: 180 PEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDI 233
            +   K +P DF LWK      + G+ S +G+GRPGWHIECSAM ++ L  +      DI
Sbjct: 172 EDNLEKHHPQDFALWKTYKGEGDLGYLSAFGKGRPGWHIECSAMIANTLAYLDEPYQIDI 231

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG DL FPHHENE  Q+ CA   ++ A  WIHNGF+N+ G+KMSKS GN   I + L+
Sbjct: 232 HGGGSDLFFPHHENEACQTRCAFN-QELAQFWIHNGFVNISGQKMSKSLGNSFYIKDALK 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTST 342
                   +   V+R  +L  HY   + F  + L   +  L K            P+ S 
Sbjct: 291 V-------YDGEVLRNYLLGVHYSAILHFNEEDLNSQKKRLDKLYRLKKRTLEISPEKSK 343

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           S      A+L A+ +DLN   A+  L +  +ES ++ D     NAS+     + C + + 
Sbjct: 344 SNQNFQHALLQAMQDDLNISKALSILEEYLQESNQSLD-----NASSKT-NKKKCAQEIL 397

Query: 403 KNIS------------------IAIEKLVQERL---ILLKM-----KKFSSADYIRKQLE 436
           +N++                  + ++  +++++   IL +      K F+ AD IRK L 
Sbjct: 398 ENLTFIDQLLGLGGKDPTLYFQLGVDTALKDKITTQILRRQKAKEAKDFALADSIRKDLA 457

Query: 437 SKGFILED 444
            +G  L D
Sbjct: 458 QQGISLMD 465


>gi|146300023|ref|YP_001194614.1| cysteinyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|187629820|sp|A5FHM5|SYC_FLAJO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146154441|gb|ABQ05295.1| cysteinyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 492

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 174/488 (35%), Positives = 239/488 (48%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  +   F+ I   N+ MYVCGPTVY   H+GN R  + FDV++R   + + + 
Sbjct: 9   LKIYNSLSGEKENFKPIHEGNVGMYVCGPTVYSNVHLGNVRTFMSFDVIFRY--FLHLDY 66

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD+          +DKI ++AR E    P+      +  + T  F       
Sbjct: 67  KVRYVRNITDVGHIVDDVDEGEDKIAKKARLEQLE-PME-----VVQRYTVDFHDILKAF 120

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKID 171
             L P+ +P AT HI + I +I+ II  G  YEAN  + FD    +   NYG  S R I+
Sbjct: 121 NFLPPSIEPTATGHIIEQIEIIKKIIDTGIGYEANGSVYFDVVKYNETNNYGVLSGRNIE 180

Query: 172 EQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +    TR +  +  K+NP DF LWK++ P     W SPW  G PGWH+EC+AMS+ YLG 
Sbjct: 181 DMLANTRDLDGQSDKRNPQDFALWKKAEPEHIMRWPSPWSDGFPGWHLECTAMSTKYLGN 240

Query: 230 VFDIHGGGLDLIFPHHENEIAQ--SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
            FDIHGGG+DL FPHHE EIAQ  +C     +   N W+H   L L G+KM+KS GN I 
Sbjct: 241 HFDIHGGGMDLKFPHHECEIAQNEACTG---QSPVNYWMHTNMLTLNGKKMAKSTGNNIL 297

Query: 288 INELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQ 339
             E+L        +++ A V R  ML  HYR  +DF+   +T AE         L   P 
Sbjct: 298 PGEILSGDNTILSKAFSASVTRFFMLQAHYRSILDFSDDAITAAEKGYKRLMEALEALPA 357

Query: 340 T-STSKGIID-----PAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPI 384
             + S   +D      A   A+ +D NT   I  L +  R         E+    DL   
Sbjct: 358 IKAGSSSSVDFAAWKQACYDAMNDDFNTPILIAQLFEAVRYINLLKEGKETISAEDLKSF 417

Query: 385 FNA----SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             A       +LG+  E   +  N  +   +  L+  R      K F+ +D IR QL + 
Sbjct: 418 STAINAFVFDVLGLSDEKAADGNNDKLEGVVNMLIGMRNQARADKNFALSDQIRDQLIAL 477

Query: 439 GFILEDYK 446
           G  L+D K
Sbjct: 478 GIQLKDGK 485


>gi|261749164|ref|YP_003256849.1| cysteinyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497256|gb|ACX83706.1| cysteinyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 484

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 167/491 (34%), Positives = 250/491 (50%), Gaps = 63/491 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  I+IYN+   K   F+ I    I +YVCGPTVY+  H+GN R  I+FD+++R  ++ 
Sbjct: 10  IRDHIQIYNSFTGKKELFKPIHKEYIGIYVCGPTVYNHLHLGNCRTFILFDLVFRYFKHL 69

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V Y+RNITD+          +DKI +R+R E    P+      I  K T  F   
Sbjct: 70  -GYK-VRYIRNITDVGHLENDSDDGEDKIHQRSRFEGIE-PME-----IVQKYTLSFHHI 121

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
                 L P+ +P AT HI + I +IQ +I    AYE N  + FD    S + +YG  S 
Sbjct: 122 LNIFNTLPPSIEPTATGHIIEQIDMIQKLIQKNLAYENNGSVYFDVKKYSQLCSYGILSH 181

Query: 168 RKIDE--QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            +ID+  +K    + EK H +   DF LWK++       W SPWG+G PGWHIEC+ MS+
Sbjct: 182 NRIDQLFKKESNFLGEKRHFQ---DFSLWKKAKHSHIMNWNSPWGKGVPGWHIECTTMST 238

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG+VFDIHGGG+DL FPHHE E+AQ+         A+ W+H   L L G+KMSKS GN
Sbjct: 239 KYLGEVFDIHGGGIDLKFPHHECELAQAIGVYNKNHLAHYWMHTNMLTLNGKKMSKSTGN 298

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI------------ 332
           +++  +L+         +   +IR  +L +HYR  ++F+ + L +AE             
Sbjct: 299 YLSTKDLVS-------KYHPIIIRFFILQSHYRSLLNFSQKGLIDAEKGYHRLINAIEKL 351

Query: 333 -LLSKWPQTSTSKGIIDPAV---LSALYNDLNTVSAI----QALHKLARESTKNHDLLPI 384
              SK  + + SK  ++  +     A+ +D NT   I    Q +H L        D + +
Sbjct: 352 EFFSKSDKKNISKFDVNKWIKNCYEAINDDFNTPLLISHLFQVIHILNHSINYIGDSIHL 411

Query: 385 FNASAH-----ILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                +     ILG++  +    E  +K + I  E L++ R+   K + +  +D IR++L
Sbjct: 412 LKKYMNHFLFDILGLQKIEKNPFEKTSKKLKILTEILIKIRIEARKKRNWVLSDLIREEL 471

Query: 436 ESKGFILEDYK 446
              G  L D K
Sbjct: 472 SRIGISLHDDK 482


>gi|255524399|ref|ZP_05391356.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187519|ref|ZP_06855914.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255511956|gb|EET88239.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048041|gb|EFG87480.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 471

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 169/488 (34%), Positives = 246/488 (50%), Gaps = 55/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+ RK  +F  I    + MY CGPTVY+FAHIGN R  I  DVL + LRY   E  V
Sbjct: 5   VYNTMSRKKEKFVPILEGKVGMYTCGPTVYNFAHIGNLRTYIFEDVLKKSLRYLGYE--V 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +V NITD+          +DK+   A++E      N ++  I       F+ D  +L  
Sbjct: 63  KHVMNITDVGHLQSDADEGEDKMELGAKRE------NKSVWEIAKFYENAFLDDCKKLNV 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             PT   RAT HI  MI LI+ +   G+ Y +N  + ++     +Y   +   ++E + G
Sbjct: 117 ETPTVICRATEHIDDMINLIKKLEEKGYTYISNGNVYYEIDKFEDYNKLANLSMEELEAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            RV    +KKNP DF+LW  ++  +     W+SPWGRG PGWH+ECSAMS  YLG+  D+
Sbjct: 177 NRVEVDENKKNPLDFVLWFTNSKFKNQIMQWDSPWGRGFPGWHLECSAMSMKYLGERIDV 236

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+D I  HH NEIAQS  A    K  N W+H  FL L+  KMSKS G+F+T+N+L E
Sbjct: 237 HCGGVDHIPVHHTNEIAQSEGAIG-HKWVNYWMHGEFLVLDSGKMSKSKGDFLTVNKLEE 295

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAV 351
                   +   V R   L + YR+ + F+   L +AEI   K      + +K   +   
Sbjct: 296 ------EGFNPLVYRYFCLQSRYRKQLLFSFDALKDAEIAYKKLKNKVAALAKDAKEDQR 349

Query: 352 LS-------------ALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNASAHILGI 394
           L               + +DLN  +A   L ++ ++    S +   L+  F+    +   
Sbjct: 350 LDLEKIKNYKNKFAEKISDDLNMPNAFTVLWEVVKDNELTSREKCHLVESFDTVLSMNLF 409

Query: 395 EVCKE-HLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           E  +E +L+ NI S  +++L++ER +  K K +S AD IR +L      + D K      
Sbjct: 410 EPNEEQNLDSNIDSELVDELIKERDMARKNKDWSKADEIRDKLSFMNIEILDSKEG---- 465

Query: 453 RMTRWKQK 460
             T+WK K
Sbjct: 466 --TKWKLK 471


>gi|319952072|ref|YP_004163339.1| cysteinyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319420732|gb|ADV47841.1| cysteinyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 493

 Score =  238 bits (606), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 173/489 (35%), Positives = 247/489 (50%), Gaps = 55/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +K+YN+L  +   F +I    I MYVCGPTVY   H+GN R  + FD+++R  ++  G
Sbjct: 7   QHLKVYNSLTGQKEPFTSIHEGAIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +DKI ++AR E    P+      +  + T  F     
Sbjct: 66  YK-VRYVRNITDAGHLENDAEDGEDKIAKKARLERIE-PME-----VVQRYTVDFHNILQ 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
           +   L P+ +P AT HI + I +I+ I+  G AYE N  + FD    +   NYG  S RK
Sbjct: 119 KFNFLPPSIEPTATGHIIEQIEIIKEILEKGFAYEVNGSVYFDVPKFNETHNYGKLSGRK 178

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  K +P DF LWK++ P     W SPWG G PGWH+EC+AMS+ YL
Sbjct: 179 LEDMIANTRELAAQDDKHSPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DL FPHHE EIAQ+  ++ +    N W+H   L L G+KM+KS GN I 
Sbjct: 239 GETFDIHGGGMDLKFPHHECEIAQAEASNGVSPV-NYWLHANMLTLNGKKMAKSTGNNIL 297

Query: 288 INELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSK 336
            +E+   T     +++   V+R  M+  HY   +D +            +L EA   + K
Sbjct: 298 PDEIFSGTNPLLSKAFTPTVVRFFMMQAHYTSILDLSNDALLASEKGFLKLMEALNTIHK 357

Query: 337 WPQTSTSKGIIDP---AVLSALYNDLNTVSAIQALH---------KLARESTKNHD---L 381
               S+S    +        A+ +D NT + I  L          K  +ES    D   L
Sbjct: 358 LETNSSSDFDFNAWQQKCYDAMNDDFNTPTLIAHLFEAVKHINAIKEGKESISEMDKALL 417

Query: 382 LPIFNASA-HILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
              FNA    ILG+E  K   N +   +S  +  L+Q R      K F+++D IR QL  
Sbjct: 418 NNTFNAFIFDILGLE-DKNDANSDTDKLSGVVALLIQLRKEARDNKDFATSDIIRDQLAE 476

Query: 438 KGFILEDYK 446
            G  L+D K
Sbjct: 477 LGIQLKDGK 485


>gi|292655283|ref|YP_003535180.1| cysteinyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370540|gb|ADE02767.1| cysteinyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 494

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 164/507 (32%), Positives = 242/507 (47%), Gaps = 82/507 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  +  EF++     + +YVCG TV D AH+G+AR  +  D+++R L Y   + 
Sbjct: 3   LSVTNTLTGEREEFES-HGDEVLLYVCGLTVSDHAHLGHARLWMHADLMHRWLDYEGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+++KI  R  ++     + D  + +        ++D   L        PR
Sbjct: 61  -VRHVENFTDVNEKIAARIGED----DLGDDEAGVAEHFVGDVIRDMRGLNLKRAEVYPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HIP++I L+Q ++  GHAYE+N  + FD S+  +YG  S +K++E +      E+  
Sbjct: 116 VSEHIPEIIDLVQTLVDRGHAYESNGSVYFDVSTFDDYGKLSNQKLEELESRATKDERSE 175

Query: 185 KKNPADFILWK------------RSTPMEP-------GWESPWGRGRPGWHIECSAMSSH 225
           K+NP DF LWK            R   +EP        WESPWG GRPGWHIECSAMS  
Sbjct: 176 KRNPTDFALWKAGAVDPKTAAEHRDPDLEPLHAPCGETWESPWGEGRPGWHIECSAMSMT 235

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           +LG   DIH GG DL+FPHHENEIAQS  A   ++ A  W+H G L  EG KMS S GNF
Sbjct: 236 HLGDTLDIHVGGRDLVFPHHENEIAQSEAA-TGQQFARYWLHVGLLQTEGDKMSSSLGNF 294

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
            T+ + L+  +FG     A VIR   L T Y     ++ + + EAE    +W +   +  
Sbjct: 295 FTVGDALD--EFG-----ADVIRTFYLSTAYGSEQTYSAETIAEAE---ERWERLERAYE 344

Query: 346 IIDPAVLS-------------------------ALYNDLNTVSAIQALHKLARESTKN-- 378
               AV S                         A+ +D N   A+  L  LA    ++  
Sbjct: 345 AAVDAVDSPDARTKVEATDLRDTVTETRENFREAMNDDFNVREAMAELLGLAGAVNRHVA 404

Query: 379 ----HDLLPIFNA-------SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK--- 424
               +D   +  A          + G+         ++S+A E LVQ  L + + ++   
Sbjct: 405 DADEYDYRALRRAVEAFEDLGGEVFGLSFGDAGEGGDVSVA-EDLVQLVLDVREAEREAG 463

Query: 425 -FSSADYIRKQLESKGFILEDYKNPDN 450
            +  AD +R  L + G  +ED   PD 
Sbjct: 464 NYERADDLRDDLTALGVDVED--GPDG 488


>gi|229818303|ref|ZP_04448584.1| hypothetical protein BIFANG_03603 [Bifidobacterium angulatum DSM
           20098]
 gi|229784173|gb|EEP20287.1| hypothetical protein BIFANG_03603 [Bifidobacterium angulatum DSM
           20098]
          Length = 548

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 168/527 (31%), Positives = 250/527 (47%), Gaps = 104/527 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYG 62
           ++K+Y+T    ++ F  I P  + MYVCG TV    HIG+ R  + FD++ R  L+  Y 
Sbjct: 30  RLKLYDTASHAVSTFTPIKPGEVGMYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY- 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+VRN+TDIDDKI+++A  E                  ++F +  + L  L PT +
Sbjct: 89  --QVTFVRNVTDIDDKILDKAAAEGQQWWAR------AYHYEREFSQAYSDLGVLPPTVE 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDE--- 172
           PRAT H+  MI +IQ II +GHAY       +    + FD +S P+YG  + +K      
Sbjct: 141 PRATGHMADMIDMIQRIIDNGHAYVVRGDDGKPTGNVYFDVASWPHYGELTHQKQTAVAD 200

Query: 173 ------QKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWG 209
                   MG  V     +KY+          K +P DF LWK    S P++  W +P+G
Sbjct: 201 AASEVADAMGPSVDNAGDDKYNPVDPADASPDKHDPRDFALWKAPKDSDPLDARWNTPFG 260

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL   FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ 
Sbjct: 261 TGRPGWHIECSAMSHRYLKDGFDIHGGGLDLRFPHHENEMAQTRAAGY--DSAARWMHSA 318

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L E
Sbjct: 319 WVTAKGEKMSKSLGNGLSVPAVLAENS----AW---VVRYALGGVQYRSMLEWSDQTLAE 371

Query: 330 AE--------------ILLSKWPQTSTSKGIIDPAV----LSALYNDLNTVSAIQA---- 367
           A+              I + + P  +    +   A+    ++A+ +D+N   A  A    
Sbjct: 372 AQSAYDRISNFIERAGIAIGEQPSRTEVASVPADALPADFVAAMNDDINVSGATAAIFTA 431

Query: 368 -------LHKLARESTKN------HDLLPIFNASAHILGIEVCKE-------------HL 401
                  L KLA  +  +       ++L    A    LG++   E               
Sbjct: 432 IRSGNTLLSKLADRADSDAAKAEVREVLLGVRAMLDTLGLDPLAEPWVNGGAAGGAAGEG 491

Query: 402 NKNISIAIEKLVQERLI----LLKMKKFSSADYIRKQLESKGFILED 444
                  ++ L++E+L       K K F+ AD IR  L + G  +ED
Sbjct: 492 ESAEHDVLDSLIREQLTARAEARKAKDFAKADAIRDALNAAGIAIED 538


>gi|325971494|ref|YP_004247685.1| cysteinyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026732|gb|ADY13491.1| cysteinyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 471

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 162/470 (34%), Positives = 233/470 (49%), Gaps = 42/470 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ R +  F  I  S + +Y CGPTVY++AHIGN R  +  D+L R LR      
Sbjct: 3   VLLYNTMSRALEPFHPIKESEVGLYSCGPTVYNYAHIGNLRTFLFEDLLKRTLRV--SGF 60

Query: 65  CVTYVRNITDI-------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            V +V NITD+       DD   +  +  H +   N     I +  T+ F KD   L  +
Sbjct: 61  TVNHVMNITDVGHLTGDGDDGEDKLEKMAHTT---NRTAWEIAAFYTEAFFKDYDDLNMI 117

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+   +AT+H+ QMI LI+ +   GH Y +   + F   SIP+YG  +R  +D  +   
Sbjct: 118 RPSTVCKATDHVQQMIDLIKRLEAGGHTYISGGNVYFSIDSIPDYGKLARLDLDALRTAV 177

Query: 178 R--VPEKYHKKNPADFILW-KRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           R  V    +KKN  DF+LW  +S   E    W+SPWGRG PGWHIECSAMS HYLG+ FD
Sbjct: 178 REDVEVDGNKKNSKDFVLWFTKSKHGEQAMMWDSPWGRGFPGWHIECSAMSMHYLGESFD 237

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+D I  HH NEIAQS  A   +   N W+H  FL  E  KMSKS G F+T++ LL
Sbjct: 238 IHCGGIDAIPVHHTNEIAQSEAATG-KGWVNYWLHGEFLLDETGKMSKSKGEFLTLS-LL 295

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGI 346
            +K +    +     R   L  HYR  + F+   L+ A               T  +K +
Sbjct: 296 TSKGYEPMDY-----RYFCLGGHYRSQLKFSFDSLSTARTARRNVYDRIQNLLTQGAKQV 350

Query: 347 I---------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD---LLPIFNASAHILGI 394
           +           A L  + NDLNT  A+  L  + ++   + D    L +F      L  
Sbjct: 351 VLQRDEALAYQTAFLQHIQNDLNTPRALADLWGVLKDENLSIDEKYSLCLFFDQVFGLKF 410

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   +   +        L+ +R    K + ++ AD +R +LES G++++D
Sbjct: 411 DSITKAEEQTFPSQALALLDQRTEAKKARNWALADSLRSELESMGYVVKD 460


>gi|158300888|ref|XP_001238361.2| AGAP011821-PA [Anopheles gambiae str. PEST]
 gi|157013377|gb|EAU75859.2| AGAP011821-PA [Anopheles gambiae str. PEST]
          Length = 525

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 156/452 (34%), Positives = 227/452 (50%), Gaps = 62/452 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           +   +++Y+   ++    Q I PS   +  Y CGPTVYD AHIG+A   +  D+L R+LR
Sbjct: 16  LTHDLRLYDGRLKEKVALQ-IHPSKSYLSFYTCGPTVYDSAHIGHASCYVRLDILQRILR 74

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +++    VT + NITDIDDKII RA ++            +  +   +F  D  RL   A
Sbjct: 75  HHFHLPLVTAM-NITDIDDKIIARALEQQVDW------QQLARRYEDEFWSDLQRLNVCA 127

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           P  + R T+HIP +I  +Q ++  G AY  A+  + F+T+    YG   +  I+ +   +
Sbjct: 128 PDVKLRVTDHIPAIIRFVQTLVEKGFAYSTADGSVYFETAKYERYGKLQKVIIEPESNAS 187

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               K  K++ +DF LWK S P EP W +P +  GRPGWHIECS ++SH  G+  D H G
Sbjct: 188 ----KGQKRHQSDFALWKASKPGEPFWTAPGFSHGRPGWHIECSTLASHLFGRTIDFHAG 243

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLET 294
           GLDL FPHHENE  QSCC   +      W+H G L+LEG+  KMSKS  N ++I ELL  
Sbjct: 244 GLDLRFPHHENEETQSCCYHDVPDWVTHWLHTGQLHLEGQTHKMSKSLKNTVSIGELLG- 302

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIID---PA 350
                 ++ A   R+  L++HYR  I++  + +  A  +L K+    S +K  ID   PA
Sbjct: 303 ------AYSADEFRMLCLLSHYRSAIEYGPEAMGTARNVLRKFASFFSDAKAYIDGLKPA 356

Query: 351 VLSA--------------------LYNDLNTVSAIQALHKLARE----------STKNHD 380
              A                    L ND NT +++ AL +LA            ST    
Sbjct: 357 AYDATSTESLLGKLSNTRTTVREFLKNDFNTANSVLALGELASNVQRIINSHEPSTSGVS 416

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
           L+   N  A +   E  +E L   +S  ++ L
Sbjct: 417 LIGSSNVGAVLAVTEYIREEL---VSYGVQSL 445


>gi|242024681|ref|XP_002432755.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212518240|gb|EEB20017.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 530

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 150/464 (32%), Positives = 242/464 (52%), Gaps = 43/464 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYN ++ +      ++ + ++ Y+CGPTVY+ +H+G+A   + FD++ R+L   +G +
Sbjct: 41  IKIYNKIKNEKVPLILLNKNFVKWYLCGPTVYNSSHVGHASTYVRFDIIRRILEQNFGIR 100

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  +  ITDIDDKII++A        ++     +  K   +F K+   L  L+PT   R
Sbjct: 101 PVVAL-GITDIDDKIIKKANL------LSTNFKTLAKKYELEFFKNLKDLNVLSPTFVLR 153

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEII-FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            ++HIP +I  I  I+    AY +    + FDT+S   YG     K++   +    P + 
Sbjct: 154 VSDHIPHIIDFIYKIVDKRQAYVSKEGCVYFDTASFGKYG-----KLNPIPLENSDPVRI 208

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+  DF LWK + P EP W+SPWG GRPGWHIECSAM+S   G   D+H GG+DL FP
Sbjct: 209 GKKSYLDFTLWKAAKPGEPFWDSPWGNGRPGWHIECSAMASEIFGSKMDLHSGGIDLKFP 268

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQSC     ++  N W+H+G L ++  KMSKS  NFITI+E L+T       + 
Sbjct: 269 HHENEEAQSCSYHDCDQWVNYWLHSGQLMIDDEKMSKSLNNFITIDEFLKT-------YS 321

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA--------EILL-------SKWPQTSTSKGII- 347
           +  +R+    +HYR  + ++ + +  A        + L+       S W + +  + II 
Sbjct: 322 SDHMRMFCFESHYRNALHYSSESMKTAVSTCNLFSDFLMDANSYIKSNWYKGNVEESIIL 381

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNAS-AHILGIEVCKEHLN 402
                +   L +D NT   + +L  L + + +  N ++    + S   +  ++   E L 
Sbjct: 382 KMSNVIKDCLMDDFNTSQCLISLMNLTKNTVRMMNEEVTVTSSRSPGAVAAVKTYVEGLL 441

Query: 403 KNISIAIE-KLVQERLILLKMKK-FSSADYIRKQLESKGFILED 444
           K+    ++  L QE    +KM+   +SA   R+++  +   L+D
Sbjct: 442 KSFGFQLDTALSQEGEDDIKMEFILNSAINFRQEVRKEALALKD 485


>gi|47226781|emb|CAG06623.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 499

 Score =  237 bits (605), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 145/410 (35%), Positives = 212/410 (51%), Gaps = 56/410 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L ++              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 14  LKVFNSLTKQKEPLILAREGVATWYSCGPTVYDHAHLGHACSYVRFDIVQRILTRLFG-I 72

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +   +TDIDDKII+R+ +E      N   ++I S    +F +D   L  + P    R
Sbjct: 73  TVIHAMVVTDIDDKIIKRSWEE------NICSTVIASLYEDEFKRDMLSLKVIPPAVYLR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
            T ++PQ++  I+ II +GHAY A   ++ FD  SI   YG F      + + G+     
Sbjct: 127 VTENVPQIVSFIERIIENGHAYAAREGDVYFDIKSIGERYGKFGGAADSQPEPGS----- 181

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWKRS   EP WESPWGRGRPGWHIECS ++S   G   DIH GG+DL F
Sbjct: 182 -HKRDARDFALWKRSKAGEPSWESPWGRGRPGWHIECSTIASTVFGSQLDIHSGGIDLAF 240

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS    +  + AN ++H+G L+L+    KMSKS  N+ITI + L       +
Sbjct: 241 PHHENEIAQSEAYHQCGQWANYFLHSGHLHLKSSAEKMSKSLKNYITIKDFL-------K 293

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------------------ 336
           S+ A   R+  L++ YR  +D++   + EA   L                          
Sbjct: 294 SFSANEFRMFCLLSKYRSAVDYSDGSMLEARSSLGSICSFMHDAGAYMKGQLQCTSVQEA 353

Query: 337 --WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             W + + +K     +V+ AL  D +T  A+ A+  L   +  N  L P+
Sbjct: 354 FLWERLAEAKS----SVVEALAEDFDTPRAVSAVMNLVHHA--NRQLQPV 397


>gi|298242724|ref|ZP_06966531.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555778|gb|EFH89642.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 486

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 158/485 (32%), Positives = 240/485 (49%), Gaps = 56/485 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K + IYNTL RK   FQ ++P  + +Y CGPTVY   H+GN R  ++ D L R+L Y   
Sbjct: 7   KPVYIYNTLTRKRELFQPLNPPGVGIYSCGPTVYKDIHVGNFRTFMMTDWLRRMLEY--N 64

Query: 63  EKCVTYVRNITDI-----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
              V  VRNITD+     DD      + E+ +     +   I  + T+Q+++D   L  L
Sbjct: 65  GYDVYLVRNITDVGHLQNDDVESGEDKLEYEARTTGRSAYDIAQRYTEQYMRDAAELNIL 124

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P   P+AT+HI +M+ + Q ++  G AY A+  + +D +  P YG  S   ++  + G 
Sbjct: 125 PPHLSPKATDHIGEMLEMTQALVEKGLAYIADGNVYYDVAHFPEYGKLSGNTVENLRAGG 184

Query: 178 RVPEKYH----KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
              E+      K++P DF LWK+     +  W SPWG G PGWHIECSAM++ YLG+ FD
Sbjct: 185 HGREQMEVAEDKRSPEDFALWKKGDEGRQMNWGSPWGSGFPGWHIECSAMATKYLGEQFD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-------------KMS 279
           IH GGLDL+FPHHE+EIAQS      E     W+H  FL +  R             KMS
Sbjct: 245 IHTGGLDLMFPHHEDEIAQSQGTFGKEPV-KYWVHGEFLIIGNRKMKASNENGDDSIKMS 303

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL------ 333
           +S GN + ++ L E              R  ML  HYR  I++T   +  A+        
Sbjct: 304 RSKGNVLLVSTLKE------EGIDPMAFRYLMLTAHYRSKINYTDDSIQAAQNALNNLRD 357

Query: 334 -LSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--- 383
            L++ P T      S     +  A   A+ NDL+  +A+     L RE+ +N  + P   
Sbjct: 358 DLAELPITEQTANWSEEAQRVRDAFREAINNDLDLPTAL----VLTRETVRNAKIEPAER 413

Query: 384 --IFNASAHILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             +      +LG+ +      K + I+  ++++V++R      K +  +D +R +L++ G
Sbjct: 414 RHLVLDFDRVLGLRLDTVEPKKPLEISDEVKEIVRQRDEARAAKNWKRSDQLRDELKALG 473

Query: 440 FILED 444
           F + D
Sbjct: 474 FEVRD 478


>gi|224436533|ref|ZP_03657542.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143036|ref|ZP_07805229.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128067|gb|EFR45684.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 504

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/511 (31%), Positives = 251/511 (49%), Gaps = 89/511 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++++++++  +F+ I P  +R+YVCGPTVYD AH+G+AR  I FD+  RL  + + + 
Sbjct: 2   ITLFDSIKKQKLKFEPISPKQVRIYVCGPTVYDDAHLGHARSSIAFDLWRRL--FLFLDF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TDIDDKII+++ Q   S      +  ++ +  + ++ D   L  L P  +P+
Sbjct: 60  KVIFAKNFTDIDDKIIKKSLQNGIS------VEEVSERYIELYLNDMHALGILRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM  +I+ ++  G+AY+  NN++    +    YGS S+R   EQ   +R+    
Sbjct: 114 ATSNLPQMHEMIEQLLQKGYAYKGENNDVYLSIAKDKAYGSLSQRTTHEQNQ-SRITNAN 172

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGK------------- 229
            K+  +DF LWK     +   ++SP+G+GRPGWHIECSAM   +L               
Sbjct: 173 DKQEESDFALWKGYKGEDDIAYDSPFGKGRPGWHIECSAMIEKHLAYDMREKQEYEKQEF 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG DL+FPHHENE +Q+ CA   E  A  W+HNGF+N+ G KMSKS GN   I 
Sbjct: 233 AIDIHAGGADLLFPHHENEASQTRCATGRE-LAKYWLHNGFVNINGEKMSKSLGNSFFIK 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE----------------AEIL 333
           + L+        +   ++R  +L  HYR  ++F  + L +                AE +
Sbjct: 292 DALKV-------YDGEILRNYLLGVHYRLALNFNEEDLLQSKKRLDKIYRLKKRIMAERI 344

Query: 334 LSKWPQT-----------------------STSKGIIDPAVLSALYNDLNTVSAIQALHK 370
               PQT                       +     I P +L AL +D N   A+  + +
Sbjct: 345 ADSIPQTKALDSTELADQLESLNTLKTHTKNAQDSFIKP-LLEALSDDYNISKALSIIEE 403

Query: 371 LARESTKNHDLLPIFNA-SAHILGIEVCKEHL----NKNISI------------AIEKLV 413
           +   S    D  P   A    I G   C E+L    +K+ ++             IE  +
Sbjct: 404 MLSISNDYLDKNPKDKAYKLAISGNLACIEYLLGLGDKDPTLYFQLGLTEQERQDIESKL 463

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILED 444
           Q R    K K +  AD IR +L+S+G  + D
Sbjct: 464 QARTEAKKQKNYVLADSIRDELKSQGIEIMD 494


>gi|206896033|ref|YP_002247201.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738650|gb|ACI17728.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 460

 Score =  236 bits (603), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 166/483 (34%), Positives = 237/483 (49%), Gaps = 56/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL RK  + +      I  YVCG T YD  H+G+ R  +VFD+ +R ++   G K
Sbjct: 1   MKLYDTLSRKFVDLEKKPGEKIAGYVCGITPYDEPHLGHVRTALVFDLFHRYVKAQ-GYK 59

Query: 65  CVTYVRNITDIDDKIIERARQE--HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            V +V N TD+DDKIIER+ Q   HP      A++ I  +   + +        + P + 
Sbjct: 60  PV-FVSNFTDVDDKIIERSVQLSIHPF-----ALAEIYERLYYKLMD----FLNVEPLYA 109

Query: 123 P-RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-QKMGTRVP 180
             R +  IP +I  I+ +I   HAY   + + F   S PNYG  S RK+++   + +RV 
Sbjct: 110 YIRVSQVIPDIIEAIKQLIDKKHAYVTPDGVYFSVPSFPNYGELSGRKVEDISLLESRVE 169

Query: 181 EKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               KK+P DF LWK   P E   W SPWG GRPGWHIEC+ +S  + G   D HGGG D
Sbjct: 170 PSPFKKDPRDFALWKSRKPNETVWWHSPWGDGRPGWHIECTVISVKFAGFPLDFHGGGSD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS      E  A  W+H G L +   +M KS GNFI   E++       
Sbjct: 230 LIFPHHENEKAQSEALMGQEPFARAWMHTGMLRIGKEEMHKSLGNFIGATEIMA------ 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------W--------PQTST 342
             +   V+R  +L T+YR+P+ F+ +   +A   ++          W         Q  +
Sbjct: 284 -KYDPDVLRYLLLSTYYRDPVTFSEEVYNQAANTVNNLRSYFERLDWVSRDGEARTQVVS 342

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARE------STKNHDLLPIF--NASAHILGI 394
                     SAL +DLN+ +A+  +HKL  +      +T    ++  F  +    + G+
Sbjct: 343 LVASAKETFHSALEDDLNSSAALAEVHKLIAQLRVEDLNTSEASIVKQFLTHGLRTVFGL 402

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            + K    K     I+ +V+ R    K KKFS AD IR  L   G +LED K        
Sbjct: 403 RLTKN--GKVDESLIQDMVELRNDFRKQKKFSEADAIRDMLLRHGIVLEDTKEG------ 454

Query: 455 TRW 457
           TRW
Sbjct: 455 TRW 457


>gi|32266016|ref|NP_860048.1| cysteinyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|61216291|sp|Q7VIT7|SYC_HELHP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|32262065|gb|AAP77114.1| cysteinyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 488

 Score =  236 bits (602), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/339 (38%), Positives = 195/339 (57%), Gaps = 24/339 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++++ +++   F  I  + IR+YVCGPTVYD AH+G+AR  IVFD+  RL  +   E 
Sbjct: 2   ITLFDSAKKQKIPFTPIQDNQIRLYVCGPTVYDDAHLGHARSSIVFDLWRRLFLFLGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII+++ Q       N ++  I S     ++KD   L  L    +P+
Sbjct: 61  -VVFVKNFTDIDDKIIKKSLQN------NASVQEIGSHYIHSYLKDMASLGVLRADIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM  +IQ ++  G+AYE  N++I        NYG+ S+R +++    +R+    
Sbjct: 114 ATDNLPQMCEMIQTLLHKGYAYEGENSDIYLRIHKDKNYGALSQR-LEQSHTQSRIQNAQ 172

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K    DF LWK      +  ++SP+G+GRPGWHIECSAM   +L         DIH GG
Sbjct: 173 DKLEHNDFALWKGYKGENDIAYDSPFGKGRPGWHIECSAMIEKHLAYQNEEYGIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE +Q+ CA   E  A  W+HNGF+N+ G KMSKS GN   I + L+    
Sbjct: 233 SDLLFPHHENEASQTRCATGRE-IAKYWLHNGFVNINGEKMSKSLGNSFFIKDALKV--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
               +   ++R  +L  HYR  ++F  + L +++  L K
Sbjct: 289 ----YDGEILRNYLLGVHYRLALNFNEEDLLQSKKRLDK 323


>gi|289583246|ref|YP_003481712.1| cysteinyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289532799|gb|ADD07150.1| cysteinyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 498

 Score =  236 bits (601), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 155/505 (30%), Positives = 237/505 (46%), Gaps = 87/505 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  +   F+  DP N+ +Y CG TV D  H+G+AR  +  DV++R L Y   + 
Sbjct: 3   LHVTNTLTGEKEPFEPQDPENVLLYYCGLTVSDPPHLGHARSWVHVDVMHRWLEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TDI++KI+ R  ++     + +  + +     ++ + D   L  L     PR
Sbjct: 62  -VRHVENFTDINEKIVARVGEDE----LGEGEAEVAETYIERTLADMRSLNLLRAEVYPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HIP++I L++ +I  G+AYE+N  + FD SS   YG  S +++DE +      E+  
Sbjct: 117 VSEHIPEIIDLVETLIEKGYAYESNGSVYFDVSSFEEYGKLSNQELDEIESQGDPDERSE 176

Query: 185 KKNPADFILWKRSTPMEPG----------------------WESPWGRGRPGWHIECSAM 222
           K+NPADF LWK +  +EPG                      W+SPWG GRPGWHIECSAM
Sbjct: 177 KRNPADFALWK-ADGVEPGDIEEHRHEAAAPAEHACETALTWDSPWGEGRPGWHIECSAM 235

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S+ +L    DIH GG DL+FPHHENE+AQS  A   ++ AN W+H     +   KMS S 
Sbjct: 236 STTHLDDTLDIHVGGRDLVFPHHENEVAQSEAA-TGQQFANYWLHCELFQMADEKMSSSL 294

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T++E ++        W   VIR  +    Y     ++ + + EA     +W Q   
Sbjct: 295 GNFVTVDEAVD-------QWGTNVIRTFLTAGSYNSQQLYSDETIAEAR---ERWEQLER 344

Query: 343 S-----KGIIDPAV--------------------LSALYNDLNTVSAIQALHKLA----- 372
           +     + +  PA                      +A+ +D NT  A  AL  +A     
Sbjct: 345 AHERAVEAVDSPAARTKVEDDDLRTAVDEARETFTTAMNDDFNTREAQSALLSVASAINA 404

Query: 373 -RESTKNHD------LLPIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLIL 419
            RE    +D       +        ILG+    +           + + ++   QER   
Sbjct: 405 HREDRDEYDYRGLRRAIDTLEELGAILGLSFTGDTTGSAALAGDVVDLVLDVREQER--- 461

Query: 420 LKMKKFSSADYIRKQLESKGFILED 444
                +  AD +R +LES G  ++D
Sbjct: 462 -ADGNYERADDLRDELESLGVEVQD 485


>gi|312131550|ref|YP_003998890.1| cysteinyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908096|gb|ADQ18537.1| cysteinyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 496

 Score =  236 bits (601), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 136/346 (39%), Positives = 192/346 (55%), Gaps = 26/346 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +K+YN+L RK   F+ ++P  + MYVCGPTVY+  H+GN R  + FD+LYR L  + G
Sbjct: 2   QALKLYNSLSRKKELFEPLNPGYVGMYVCGPTVYNNVHLGNIRTFLTFDILYRYL-LHTG 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          +DKI + A+ E    P+      +  + T  F     
Sbjct: 61  YK-VRYVRNITDVGHLVGDGDEGEDKIGKIAKLEKLE-PME-----VVQRYTNDFHDVLN 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRR 168
           +   L P+ +P AT H+ + I  +Q++I  G AYE+N  + FD +       NYG  S R
Sbjct: 114 QFNFLPPSIEPSATGHLIEQIEAVQDLIQKGLAYESNGSVYFDINKYNEAGNNYGKLSGR 173

Query: 169 KIDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +++    TR  + +  K+NP DF LWK++ P     W SPWG+G PGWH+EC+ MS  Y
Sbjct: 174 ILEDLLNETRALDGQAEKRNPLDFALWKKAAPEHIMQWNSPWGKGFPGWHLECTCMSVKY 233

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG+DL FPHHE EIAQ       E     W+H+  L + G+KMSKS GN  
Sbjct: 234 LGNQFDIHGGGMDLKFPHHECEIAQGKGLTG-EDPVRYWMHSNMLTVNGQKMSKSLGNSF 292

Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
              EL+        +++    +R  ML +HYR  +DF+   L  A+
Sbjct: 293 LPRELITGDHPLLEQAYSPMTVRFFMLQSHYRSTLDFSNDALKAAQ 338


>gi|269964028|ref|ZP_06178334.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831247|gb|EEZ85400.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 457

 Score =  236 bits (601), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 158/462 (34%), Positives = 233/462 (50%), Gaps = 37/462 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K++++NTL R +  F  I+   + +Y CGPTVYD+AH GN R  +  DVL R L    
Sbjct: 3   QSKLQLFNTLGRTLEPFNTIESGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLEL-- 60

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
               V +V NITD+          +DK+ + AR++      N +   I       F+ D 
Sbjct: 61  NGYDVNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAKYFEDAFLDDL 114

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
           T L    P+   RAT HI + I  +Q +      Y+ ++ + FD++ +P+YG  ++   +
Sbjct: 115 TSLNITKPSIICRATEHIQEQIEFVQELEQKSFTYQTSDGVYFDSAKLPDYGKLAKLDRE 174

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
             + G RV E   KK+P DF LWK S  TP +  WESPWG G PGWHIECSAM+  YLG+
Sbjct: 175 GLEAGIRV-EMAEKKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGE 233

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           VFDIH GG D I  HH NEIAQ C A      AN W+H  FL L   K+SKS G  + ++
Sbjct: 234 VFDIHVGGEDHIPVHHTNEIAQ-CQAKNGHVQANYWLHGFFLQLNKEKISKS-GTSLRLD 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTST 342
             +E      + +     R  +L +HYR  + FT + L  A+  L       S  P+   
Sbjct: 292 AFIE------KGYDPLTYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKVSALPEGGK 345

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +     +S + NDL    AI  + +L      + D          + G+E+ K    
Sbjct: 346 VDQMYVERFVSLINNDLAMPQAIALMWELLGSVLNDADKKATARYFDRVFGLELDKV-EE 404

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + I + I +LV+ RL + K K++  AD IR+++   G+ + D
Sbjct: 405 EEIPLEILELVELRLEMKKQKEYQQADEIRQKVAEIGYRIND 446


>gi|255037654|ref|YP_003088275.1| cysteinyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950410|gb|ACT95110.1| cysteinyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 500

 Score =  236 bits (601), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 141/350 (40%), Positives = 195/350 (55%), Gaps = 38/350 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL RK   F  I P  + MYVCGPTVY+  H+GN R  + FD+L+R L +  G K
Sbjct: 9   LKIFNTLTRKKDVFVPIAPPYVGMYVCGPTVYNNVHLGNIRTFLSFDILFRYLTHI-GYK 67

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD+          +DKI + A+ +    P+      I  + T  F + T   
Sbjct: 68  -VRYVRNITDVGHLVGDGDEGEDKIGKMAKLQKLE-PME-----IVQRYTNDFHEVTAVF 120

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKI 170
             L+P+ +P AT H+ + I  ++ +I  G AYE+N  + FD +        YG  S R I
Sbjct: 121 NLLSPSIEPTATGHLIEQIEAVEALIEKGVAYESNGSVYFDINKYQAGGNEYGKLSGRII 180

Query: 171 DEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           ++    TR +  +  K+NP DF LWK+++P     WESPWG+G PGWH+EC+ MS+ YLG
Sbjct: 181 EDLLNETRDLDGQAEKRNPLDFALWKKASPEHIMQWESPWGKGFPGWHLECTCMSAKYLG 240

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN---- 284
           K FDIHGGG+DL FPHHE EIAQ       E+    W+H   L + G+KMSKS GN    
Sbjct: 241 KQFDIHGGGMDLKFPHHECEIAQGKSLTG-EEPVRYWMHTNMLTVNGQKMSKSLGNSFLP 299

Query: 285 ---FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
              F   +ELLE      +++    +R  ML + YR  +DF+   L  A+
Sbjct: 300 AELFSGNHELLE------QAYSPMTVRFFMLQSQYRSTLDFSNDALKAAQ 343


>gi|296453539|ref|YP_003660682.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296182970|gb|ADG99851.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 546

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 176/548 (32%), Positives = 257/548 (46%), Gaps = 120/548 (21%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R  L+  Y
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+++A                     ++F +    L  L PT 
Sbjct: 89  ---KVTFVRNVTDIDDKILDKAAA------AGQRWWARAYYYEREFTEAYNTLGVLPPTV 139

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY---EANNE----IIFDTSSIPNYGSFSRRK----I 170
           +PRAT H+  MI LIQ I+ +GH Y   +AN +    + FD +S P+YG  + +K    +
Sbjct: 140 EPRATGHMSDMIDLIQRILDNGHGYVVTDANGKPTGNVYFDVASWPHYGELTHQKQTSEV 199

Query: 171 DE-----QKMGTRV----PEKYH----------KKNPADFILWKR---STPMEPGWESPW 208
           DE      +MG  V     +KY+          K +P DF LWK    + P +  W +P+
Sbjct: 200 DEAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPF 259

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+
Sbjct: 260 GVGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHS 317

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L 
Sbjct: 318 AWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALV 370

Query: 329 EAE--------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQA--- 367
           EA+              + L   P      + S   +    ++A+ +D+N   A  A   
Sbjct: 371 EAQAAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFT 430

Query: 368 --------LHKLA------------RES---------TKNHDLL--PIFNASAHILGIEV 396
                   L +LA            RE+         T   D L  P  +A     G   
Sbjct: 431 AIRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGGAADGTAE 490

Query: 397 CKEHLNKNISIAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             EH       A+E L+ E+L       K K F+ AD IR  L   G  +ED      G 
Sbjct: 491 SPEH------AALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GP 538

Query: 453 RMTRWKQK 460
           + + W  K
Sbjct: 539 QGSTWSLK 546


>gi|295148062|ref|NP_001171155.1| hypothetical protein LOC361184 [Rattus norvegicus]
 gi|183986065|gb|AAI66536.1| RGD1311612 protein [Rattus norvegicus]
          Length = 550

 Score =  235 bits (600), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 148/406 (36%), Positives = 213/406 (52%), Gaps = 55/406 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  K           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTSVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N + + + S   ++F +D   L  L PT   
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTVYL 148

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  IQ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 149 RVTENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKL----VNTVPSATAEPA 204

Query: 182 -KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++ +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+DL
Sbjct: 205 VDSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDL 264

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS    + ++  N ++H+G L+++G+  KMSKS  N+ITI + L+T    
Sbjct: 265 AFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLQT---- 320

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------------- 336
              +   V RL  L T+YR  ID++   L EA  LL                        
Sbjct: 321 ---FSPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPVG 377

Query: 337 ----WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
               W + +++K     AV +AL ND +T  A+ ++  L   + + 
Sbjct: 378 EDVLWERLASTK----KAVKAALANDFDTPRAVNSILDLVHHANRQ 419


>gi|291524578|emb|CBK90165.1| cysteinyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 475

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 165/480 (34%), Positives = 235/480 (48%), Gaps = 51/480 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL R+I          I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V  V NITD+          +DK+++ A++EH S+        +  + T  F KD
Sbjct: 61  GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSV------MEVAKEYTDAFFKD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
            T +    P     ATN IP+ I++++ +I  G+AY A   + FDTS + +Y  FS    
Sbjct: 113 FTAVHNRMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVE 172

Query: 171 DEQ-KMGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
            EQ ++G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S 
Sbjct: 173 KEQLQVGVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISM 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +LG+  DIH GG+D IFPHH NEIAQS            W H   LN    KMSKS G 
Sbjct: 233 KHLGEYVDIHCGGVDNIFPHHTNEIAQSESY-LGHDWCKYWFHVNHLNDRAGKMSKSKGA 291

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
            +T++ L E      + +     R   L +HYR+P++F+   L  A    +K  +     
Sbjct: 292 ILTVSVLQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAEL 345

Query: 343 -SKGIIDPAVLS--------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
             +G ID    +        A+ NDLNT  AI  ++ + +    +   L + +    +L 
Sbjct: 346 KDEGDIDETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLD 405

Query: 394 IEV---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +              +  +   I   + ER    K K F++AD IR +L +KG  ++D
Sbjct: 406 LGLRESGKALLEASSSADSELEAFINDKITERAAAKKAKDFATADAIRDELLAKGVAIKD 465


>gi|294787393|ref|ZP_06752646.1| cysteine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294484749|gb|EFG32384.1| cysteine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 550

 Score =  235 bits (600), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 168/554 (30%), Positives = 249/554 (44%), Gaps = 123/554 (22%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T   K+ +F+ + P  + MYVCG TV    H+G+ R  + FDV+ R       E 
Sbjct: 16  VRIYDTAHHKVMDFRPVTPGKVTMYVCGATVQASPHVGHVRAGVSFDVIRRWFMKLGYE- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKI+++A  +  +               Q+F +    L  L PT++PR
Sbjct: 75  -VTFVRNVTDIDDKILDKAAADGQNWWAR------AYYYEQEFSQAYRVLGVLTPTYEPR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           AT H+  M+ L+Q +I  GHAY         +  + FD  S P+YG  + ++   Q  G 
Sbjct: 128 ATGHVTDMVDLVQRLIDRGHAYLIPNPDGSPSGNVYFDVPSWPHYGELTHQQAGTQATGD 187

Query: 178 RVP---------------EKYH----------KKNPADFILWKRS---TPMEPGWESPWG 209
                             +KY+          K +P DF LWK S    P+   W +P+G
Sbjct: 188 ESARIADAMGPSVDAAGEDKYNPADEADLSEEKHDPRDFALWKASKDSDPLTARWRTPFG 247

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWH+ECSAMS  YLG  FDIHGGGLDL FPHHENE+AQS  A      A+ W+H+ 
Sbjct: 248 TGRPGWHLECSAMSHRYLGDEFDIHGGGLDLRFPHHENEMAQSRAAGW--GFAHYWMHSA 305

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS GN ++I  +L         W   ++R A+    YR  ++++ Q + E
Sbjct: 306 WVTQKGEKMSKSLGNGLSIPVVLSQCT----PW---MVRYALATVQYRSMLEWSQQTIAE 358

Query: 330 AEILLSKWP-----------QTSTSKGIIDPA------VLSALYNDLNTVSAIQALHKLA 372
           A+   S+             Q S  +    PA       ++A+ +D N  +A+ A+    
Sbjct: 359 AQSAYSRISNFLDHAGAAVGQPSRQEVTSYPADQLPQDFIAAMNDDFNVSTALAAVFSSI 418

Query: 373 R-ESTKNHDLLPIFNASAHILGIEVCKEHL------------------------------ 401
           R  +T  +DL  +   S     I + KE L                              
Sbjct: 419 RYGNTTMNDLATLPEGSERDQAITLLKESLLLVRAMLDVFGLDPLDPQWLPGGDGFPAQA 478

Query: 402 -----------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                            +K +   I   + +R    K K F+ AD IR  L + G  +ED
Sbjct: 479 EDSAQADKTSGASSSQTSKVLDSLIRSQLDQRQAARKAKDFARADAIRNSLAAAGISIED 538

Query: 445 YKNPDNGQRMTRWK 458
                 G + + WK
Sbjct: 539 ------GPQGSSWK 546


>gi|187251570|ref|YP_001876052.1| cysteinyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971730|gb|ACC98715.1| Cysteinyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 460

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 152/466 (32%), Positives = 231/466 (49%), Gaps = 42/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L ++  +   I+     MY CGPTVY++AHIGN R  I  D+L R LR    E 
Sbjct: 1   MQLYNSLTKEKEKIVPINVDYATMYACGPTVYNYAHIGNLRTYIFEDILVRALRL---EM 57

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V +V N+TD+          DDK+   A +E  S         I     ++F +D   L
Sbjct: 58  PVKHVMNVTDVGHLTSDGDSGDDKMELGAAREGKSA------WDIAKFYEKKFFEDFDSL 111

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSF-SRRKIDEQ 173
            C+ P+   RAT HI +MI L+  +   G  Y+ ++ I +DTS   +Y        I   
Sbjct: 112 NCVRPSVISRATEHIKEMIELVSILEQKGFTYKTSDGIYYDTSKFSHYHDLVGASHISGL 171

Query: 174 KMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           K G RV     K+NP+DF LWK   +    +  W+SPWG G PGWHIECSAM+  YLG  
Sbjct: 172 KSGARVEFNTEKRNPSDFALWKFSPKDKKRQMEWDSPWGTGFPGWHIECSAMAMKYLGPT 231

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D +  HH NEIAQS  A   ++    W+H  FL L   KMSKS+G F+T++ 
Sbjct: 232 IDIHCGGIDHVAIHHTNEIAQSEAATG-KQYVRYWVHGEFLVLHAGKMSKSDGTFLTLDA 290

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID 348
           L E      + +     R   L  HYR  ++FT + L  A+  L      + +   G++D
Sbjct: 291 LKE------KGYKPLDYRYLCLGAHYRTQLEFTFESLDFAKASLKGLRDRAKALKDGVVD 344

Query: 349 PAVL--------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
            A +        +AL +DLNT   +  + +  + +  +         +  +  +++ K  
Sbjct: 345 EAQVEEFKAKFAAALKDDLNTSKGLAVIWETLKSNAADGTKKEFLKYTEFVFALDLFKVE 404

Query: 401 LNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + I   ++ L+ ER    K K F  +D +R ++ + GFI++D
Sbjct: 405 KEAGVEIPAEVQSLLDERANARKEKDFKKSDELRDKINTLGFIVKD 450


>gi|332291036|ref|YP_004429645.1| cysteinyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169122|gb|AEE18377.1| cysteinyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 494

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 164/487 (33%), Positives = 246/487 (50%), Gaps = 54/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++ +YN+L  K   F+ +    + MYVCGPTVY   H+GN R  + FD+++R L++  G
Sbjct: 7   QELTVYNSLSGKKELFKPLLEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +DKI ++AR E    P+      +  K T  F     
Sbjct: 66  YK-VRYVRNITDAGHLTDDADQGEDKIAKKARLEKIE-PME-----VVQKYTLDFHDILN 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
           +   L P+ +P AT HI + + +I+ II +G+AYE N  + FD         YG  S RK
Sbjct: 119 KFNFLPPSIEPTATGHIIEQMEIIKKIIDNGYAYEKNGSVYFDVVKFNKDHEYGKLSGRK 178

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  K+NP DF LWK++ P     W SPWG G PGWH+EC+AMS+ YL
Sbjct: 179 LEDMIANTRTLNAQDEKENPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DL FPHHE EIAQ+  A   E     W+H   L L G+KM+KS GN I 
Sbjct: 239 GDQFDIHGGGMDLKFPHHECEIAQNEAALGTE-PVRYWLHANMLTLNGQKMAKSTGNSIN 297

Query: 288 INELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL--- 333
             E+     +   + +   V R  +L T YR  +DF+            RL EA  +   
Sbjct: 298 PGEIFSGDSEHLSKGFAPSVARFFILQTSYRSIMDFSNDALLASEKGFHRLMEALKIAKN 357

Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNT-------VSAIQALH--KLARESTKNHDLLPI 384
           L+   ++S        +  +A+ +D NT         A++ +H  K  + +    DL  +
Sbjct: 358 LTVSKESSFDVTAWKQSCYNAMNDDFNTPILIAQLFEAVKQIHLIKDGKATITAEDLKLL 417

Query: 385 FNASA----HILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
            +        +LG+E      +  +  ++  +E L++ R    + K F+ +D IR +L  
Sbjct: 418 LDTLEAFVFDVLGLEDNNAFAKADDSKLNGTVELLIKLRKEARENKDFALSDKIRDELIE 477

Query: 438 KGFILED 444
            G  L+D
Sbjct: 478 LGIQLKD 484


>gi|26553474|ref|NP_757408.1| cysteinyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|61216349|sp|Q8EX28|SYC_MYCPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|26453480|dbj|BAC43812.1| cysteinyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 439

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/330 (39%), Positives = 188/330 (56%), Gaps = 23/330 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRL-LRYYYGE 63
           +KIY+ + +   E  ++D  NI+MYVCGPTVY+  HIGN RP+I FDVL RL L   Y  
Sbjct: 1   MKIYDFVSKTDKEV-SLDKKNIKMYVCGPTVYNHVHIGNLRPIITFDVLNRLFLELGYN- 58

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ- 122
             VT++ NITDIDDKI+ +A++E+        + + +   TQ F  D  +   +  ++  
Sbjct: 59  --VTFIHNITDIDDKIVNKAKEENIG-----ELELSSYYETQYF--DILKTINIHTSNMK 109

Query: 123 -PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PR ++HI  +   IQ I+ +  AY  + ++ FDT+    YG  S +K+DE  +G +  +
Sbjct: 110 FPRVSDHIKDIENYIQKIVNNKFAYLVDGDVYFDTTKSNQYGKISNKKLDELLVGDKSED 169

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K NP DF LWK++T +   W+  +  GRPGWH ECS + + YLG   DIHGGG+DL 
Sbjct: 170 NLKKNNPQDFALWKQTT-IGLNWDLKFSTGRPGWHTECSCLINKYLGDQIDIHGGGIDLK 228

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE  Q+   +  +  A IW+H G LN+  +KMSKS  NFI   +LL         
Sbjct: 229 FPHHENENIQNIAVNN-KDLARIWMHVGHLNINNQKMSKSLSNFILAKDLL-------SE 280

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           +    +R     T Y  P++FT + L  ++
Sbjct: 281 YNTNTVRWFFYQTSYSNPLNFTTENLINSK 310


>gi|225022147|ref|ZP_03711339.1| hypothetical protein CORMATOL_02180 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945080|gb|EEG26289.1| hypothetical protein CORMATOL_02180 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 445

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 153/454 (33%), Positives = 222/454 (48%), Gaps = 57/454 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MY+CG T     HIG+ R  + FD++ R L        V +VRN+TDIDDKI+ +A +  
Sbjct: 1   MYLCGATPQTNPHIGHVRSGVAFDIVRRWL--MASGYDVAFVRNVTDIDDKILTKAAE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N       S   + F      L  L P+ +PRAT H+ QMI  +Q +I  G AY 
Sbjct: 57  ----ANRPWWEWVSTYERAFSHAYDMLGVLPPSVEPRATGHMTQMITYMQRLIDAGFAYP 112

Query: 148 ANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
           A   + FD ++       +YGS S   + + + G    +   K++P DF LWK + P EP
Sbjct: 113 AQGSVYFDVAAWSAADGSDYGSLSGNNLVDMEQGET--DNVGKRSPQDFALWKAAKPGEP 170

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W +PWG GRPGWH+ECSAMS+ YLG  FDIHGGGLDL FPHHENEIAQ+  A   +  A
Sbjct: 171 SWPTPWGDGRPGWHLECSAMSTWYLGPEFDIHGGGLDLQFPHHENEIAQAHAAG--DGFA 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPID 321
             W+HN ++ + G KMSKS GN +++ E+++  +        PV +R  +   HYR  ++
Sbjct: 229 RYWMHNHWVTIAGEKMSKSLGNVLSVPEIVKLVR--------PVELRYYLGSAHYRSVLE 280

Query: 322 FTVQRLTEA-------EILLSKWP----QTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           ++   L EA       E  + K      Q     G    A   A+ +D+    A+  +H 
Sbjct: 281 YSPDALQEAAQGYRRIETFVEKVDDLPGQPPVPVGEWTDAFAEAMNDDIGVPRALAEIHN 340

Query: 371 LAREST---------KNHDLLPIFNASAHILGIEVCKEHLNKNIS-------IAIEKLVQ 414
             R            +   +     A   +LG +   +      S       +A++ LVQ
Sbjct: 341 TVRAGNSALAMRDYGEARRMAARVRAMTEVLGFDPLSDQWQDGESVRFDAPMVALDALVQ 400

Query: 415 ERL----ILLKMKKFSSADYIRKQLESKGFILED 444
           E L    I   +K + +AD +R +L   G I+ D
Sbjct: 401 EELNRREIARSVKDWETADAVRDRLLEVGIIVTD 434


>gi|110667612|ref|YP_657423.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
 gi|109625359|emb|CAJ51782.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 497

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 159/501 (31%), Positives = 241/501 (48%), Gaps = 79/501 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  +  EF+      + +YVCG TV D AH+G+AR  +  D+++R L Y     
Sbjct: 3   LSVTNTLTGEREEFEP-RGDEVLLYVCGLTVSDHAHLGHARLWVHADIMHRWLEYQ--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+++KI+ R  ++     + +  + +    T   ++D   L     T  PR
Sbjct: 60  TVRHVENFTDVNEKIVARIGED----ELGETEATVADHFTNSVIQDMRGLNLKRATVYPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HIP +I L+++++  G+AYEAN  + FD ++   YG  S +++DE +  T   E+  
Sbjct: 116 VSEHIPTIIDLVESLLDDGYAYEANGSVYFDVTAFDGYGDLSNQQLDEMEAQTPADERAE 175

Query: 185 KKNPADFILWK------------RSTPMEP-------GWESPWGRGRPGWHIECSAMSSH 225
           K++PADF LWK            RS  ++         W +PWG GRPGWHIECSAMS  
Sbjct: 176 KRHPADFALWKAGGVKPDDLNEHRSEELDQLETTHGQTWNAPWGEGRPGWHIECSAMSMD 235

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           +L +  DIH GG DL+FPHHENE+AQS  A   ++ A  W+H G L   G KMS S GN 
Sbjct: 236 HLDETLDIHVGGRDLMFPHHENEVAQSEAATD-QQFARYWLHVGLLQSAGDKMSSSIGNI 294

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
           +TI + L+            VIR+  L T YR         L EA     +W +      
Sbjct: 295 LTIKQALDEHGVN-------VIRMFYLATAYRSEQTLGQSELAEA---TERWDRLNRAYE 344

Query: 340 -------TSTSKGIIDPAVL------------SALYNDLNTVSAIQALHKLAR------E 374
                  ++ +  I++   L            SA+ ND N   AI +L KLA       +
Sbjct: 345 MAVDASNSTDAYAIVEDESLRSSVSETKSSFTSAMNNDFNVREAIASLLKLATSVNRHLD 404

Query: 375 STKNHDLLPIFNA--SAHILGIEVCKEHL------NKNISIA---IEKLVQERLILLKMK 423
           S + +D   ++ A  +   LG EVC          +  + IA   IE ++  R    +  
Sbjct: 405 SQERYDYRGLYMAIEAFEALGGEVCGLKFGDQPTGDGTVEIAEELIELILDVRETEREAG 464

Query: 424 KFSSADYIRKQLESKGFILED 444
            +  AD +R  L+  G  ++D
Sbjct: 465 NYDRADELRDSLDEIGIEVQD 485


>gi|315227039|ref|ZP_07868826.1| cysteinyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
 gi|315119489|gb|EFT82622.1| cysteinyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
          Length = 557

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 168/554 (30%), Positives = 249/554 (44%), Gaps = 123/554 (22%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T   K+ +F+ + P  + MYVCG TV    H+G+ R  + FDV+ R       E 
Sbjct: 23  VRIYDTAHHKVMDFRPVTPGKVTMYVCGATVQASPHVGHVRAGVSFDVIRRWFMKLGYE- 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKI+++A  +  +               Q+F +    L  L PT++PR
Sbjct: 82  -VTFVRNVTDIDDKILDKAAADGQNWWAR------AYYYEQEFSQAYRVLGVLTPTYEPR 134

Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           AT H+  M+ L+Q +I  GHAY         +  + FD  S P+YG  + ++   Q  G 
Sbjct: 135 ATGHVTDMVDLVQRLIDRGHAYLIPNPDGSPSGNVYFDVPSWPHYGELTHQQAGTQATGD 194

Query: 178 RVP---------------EKYH----------KKNPADFILWKRS---TPMEPGWESPWG 209
                             +KY+          K +P DF LWK S    P+   W +P+G
Sbjct: 195 ESARIADAMGPSVDAAGEDKYNPADEADLSEEKHDPRDFALWKASKDSDPLTARWRTPFG 254

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWH+ECSAMS  YLG  FDIHGGGLDL FPHHENE+AQS  A      A+ W+H+ 
Sbjct: 255 TGRPGWHLECSAMSHRYLGDEFDIHGGGLDLRFPHHENEMAQSRAAGW--GFAHYWMHSA 312

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS GN ++I  +L         W   ++R A+    YR  ++++ Q + E
Sbjct: 313 WVTQKGEKMSKSLGNGLSIPVVLSQCT----PW---MVRYALATVQYRSMLEWSQQTIAE 365

Query: 330 AEILLSKWP-----------QTSTSKGIIDPA------VLSALYNDLNTVSAIQALHKLA 372
           A+   S+             Q S  +    PA       ++A+ +D N  +A+ A+    
Sbjct: 366 AQSAYSRISNFLDHAGAAVGQPSRQEVTSYPADQLPQDFIAAMNDDFNVSTALAAVFSSI 425

Query: 373 R-ESTKNHDLLPIFNASAHILGIEVCKEHL------------------------------ 401
           R  +T  +DL  +   S     I + KE L                              
Sbjct: 426 RYGNTTMNDLATLPEGSERDQAITLLKESLLLVRAMLDVFGLDPLDPQWLPGGDGFPAQA 485

Query: 402 -----------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                            +K +   I   + +R    K K F+ AD IR  L + G  +ED
Sbjct: 486 EDSAQADKTSGASSSQTSKVLDSLIRSQLDQRQAARKAKDFARADAIRNSLAAAGISIED 545

Query: 445 YKNPDNGQRMTRWK 458
                 G + + WK
Sbjct: 546 ------GPQGSSWK 553


>gi|154148402|ref|YP_001406167.1| cysteinyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166200141|sp|A7I0X6|SYC_CAMHC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|153804411|gb|ABS51418.1| cysteinyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 468

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 160/473 (33%), Positives = 239/473 (50%), Gaps = 52/473 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I++++ +K  EF  ++   +R+YVCGPTVYD AH+G+A+  I FD+L R L    G K V
Sbjct: 3   IFDSVVKKKLEFIPLENDFVRIYVCGPTVYDDAHLGHAKSAISFDLLRRTL-VALGFK-V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +V+N TDIDDKI+++      S+        IT     +++ D   L  L    +PRAT
Sbjct: 61  KFVKNFTDIDDKILKKMEDSGKSLK------EITEFYISRYLDDMNALNVLRADIEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             I ++I  ++ ++ +G AY+   + I FDTS   +Y S S +K  ++ +  RV     K
Sbjct: 115 ECIDEIIEFVEELLDNGAAYKIQGDGIYFDTSKDSDYLSLSGKKDSDENIA-RVASNAQK 173

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGGLDL 240
           K+  DF LWK     E  +++ +G GRPGWH EC  M   YL       + DIH GG+DL
Sbjct: 174 KDEKDFALWKFD---EKYYKAKFGCGRPGWHTECVVMIKKYLTDNKQKYLIDIHAGGMDL 230

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE AQ  CA+  +  A  W+HNGF+ +   KMSKS GN   I + L+       
Sbjct: 231 LFPHHENEAAQCRCAEH-KNLAKYWMHNGFVQVNNEKMSKSLGNSFFIKDALKI------ 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIID----PAV 351
             P   +R  ++ +HYR   +++V  L  ++  L K  +         KGI D      +
Sbjct: 284 -VPGEALRFYLMSSHYRANFNYSVNDLFSSKKRLDKIYRLKKRLQGAKKGISDEKFKAEI 342

Query: 352 LSALYNDLNTV-----------SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           L AL +DLNT            SA + L K  ++  K  ++L   +     LGI    E+
Sbjct: 343 LDALSDDLNTSLALSIVDSMVNSANERLDKNPKDKMKKGEILANLDFVKETLGILYTDEN 402

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           L     ++      I  L+ +R    K K F+ AD IR++L  +   L D  N
Sbjct: 403 LYFQFGVSETKKAEISDLIAQRDAAKKEKNFALADEIREKLALQNITLMDTPN 455


>gi|262341324|ref|YP_003284179.1| cysteine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272661|gb|ACY40569.1| cysteine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 485

 Score =  234 bits (598), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 163/488 (33%), Positives = 243/488 (49%), Gaps = 57/488 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIYN+L  K   F+ I    + +YVCGPTVY+  H+GN R  I FDV++R L++  
Sbjct: 10  RNNLKIYNSLTGKKELFKPIHEEYVGIYVCGPTVYNHLHLGNCRTFISFDVVFRYLKHL- 68

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V YVRNITD+          +DKI +++R E    P+      I  K T  F    
Sbjct: 69  GYK-VRYVRNITDVGHLENEENDLEDKISKKSRIEGLE-PME-----IVQKYTLSFHNLL 121

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
             L    P  +P AT HI + I +I+ +I    AYE N  + F+      + +YG  S+ 
Sbjct: 122 NILNVQPPNIEPTATGHIIEQIDMIEKLIAKNLAYEINGSVYFNLKEYGKLYSYGILSKN 181

Query: 169 KIDEQKMGTRVPEKYHKKNPAD--FILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           KID  K+  +    + +KN     F LWKR+       W SPWG+G PGWHIEC+AMS+ 
Sbjct: 182 KID--KLFNK-EFNFQEKNVIHKIFSLWKRAHSGHIMSWNSPWGKGFPGWHIECTAMSTK 238

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL FPHHE E+AQ+         A+ W+H   L L G+KMSKS GNF
Sbjct: 239 YLGVTFDIHGGGIDLKFPHHECELAQATAIYNKSYLAHYWMHTNMLTLNGKKMSKSTGNF 298

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           + + ++++   F  + +   ++R  +L +HYR  +DF+ + L  AE   +K  +      
Sbjct: 299 LILKDVIQ---FYKKPFSPSILRFFILQSHYRSVMDFSKEGLMNAEKGYNKIMKAINKLK 355

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH--------------- 390
             DP +    +N  N    I+  +K   +      L+     + H               
Sbjct: 356 NFDPNISKKNHNVFNVYDWIKDCYKAIDDDFNIPLLISHLFKATHVINSLNEIEKSYLLK 415

Query: 391 ---------ILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                    ILG++  ++  N   K + I +++L++ R    K K +  +D IR++L S 
Sbjct: 416 KYMTYFVFDILGLQDQEQKTNSSEKKLKILVKRLIKFRAEARKQKNWIVSDKIREELSSI 475

Query: 439 GFILEDYK 446
           G    D K
Sbjct: 476 GIPFHDDK 483


>gi|313676536|ref|YP_004054532.1| cysteinyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943234|gb|ADR22424.1| cysteinyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 495

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 140/347 (40%), Positives = 195/347 (56%), Gaps = 25/347 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K++KI N+L R+   F+ I+P  + MYVCGPTVY  AH+GN R  + FDV+ R LR+ 
Sbjct: 1   MDKELKIQNSLTRQKEIFKPINPPFVGMYVCGPTVYSDAHMGNVRTFMSFDVINRYLRHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          +DKI ++A+ E+   P+      I  +    F + 
Sbjct: 61  -GYK-VRYVRNITDVGHLVDDADDGEDKIGKKAKLENVE-PME-----IVQRYANGFHRV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
                 L P  +P AT HI + I + + ++ +G AYE N  I FD S       YG  S 
Sbjct: 113 MDLFNILEPDIEPTATGHIVEQIEINKKLLENGWAYEKNGSIYFDVSKYNEAHEYGILSG 172

Query: 168 RKIDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           RKI++ +  TR  + +  KKNP DF LWK+++      W SPW  G PGWH+EC+ MS+ 
Sbjct: 173 RKIEDLQSNTRTLDGQDDKKNPLDFALWKKASDEHIMRWPSPWSDGFPGWHLECTVMSTK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG+ FDIHGGG+DL FPHHE EIAQ+  A+  +   N WIH   L + G+KMSKS GN 
Sbjct: 233 YLGETFDIHGGGMDLKFPHHECEIAQAVGANG-KTPVNYWIHTNMLTVNGQKMSKSLGNS 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
               +L+        + +    +R  M+ THY   +DF+ + L  A+
Sbjct: 292 FLPTQLVSGNHDMLEQGYTPMTVRFFMMQTHYSSTLDFSNEALKAAQ 338


>gi|156543451|ref|XP_001601176.1| PREDICTED: similar to Albumin [Nasonia vitripennis]
          Length = 515

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 144/367 (39%), Positives = 199/367 (54%), Gaps = 46/367 (12%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y+CGPTVYD AHIG+A   + FD++ R+L  ++ +  V  V  +TDIDDKII+RA +   
Sbjct: 60  YMCGPTVYDSAHIGHACTYVKFDIIRRILSEFF-DINVVLVMGLTDIDDKIIKRANESGQ 118

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
           S         IT K  ++F+ D   L  L P    + TN+IPQ++  ++ I+    AY  
Sbjct: 119 SW------QSITQKYEKEFISDMDSLNVLKPFATCKVTNYIPQIVEFVEKIVNKNGAYVG 172

Query: 149 -NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
            +  + FDTS+  NYG     K+D  +     P+K   ++  DF LWK S   EP WESP
Sbjct: 173 KDGSVYFDTSNYRNYG-----KLDTPQAQEPHPDK---RSSLDFALWKASKENEPYWESP 224

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WGRGRPGWHIECSA++S  LG   DIH GG+DL FPHHENE AQSCC     +  N W+H
Sbjct: 225 WGRGRPGWHIECSAIASTVLGSNIDIHSGGMDLAFPHHENEEAQSCCYHEKNQWINYWLH 284

Query: 268 NGFLNLEG-RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT--- 323
            G L+LEG  KMSKS  N ++I  LL+T+        A   R+  L++ YR+ + F+   
Sbjct: 285 TGHLHLEGDTKMSKSLQNTVSIPSLLKTQ-------TANQFRMLCLLSDYRKNVIFSKTL 337

Query: 324 ----VQRLTEAEILLSKWPQTSTSK---GIIDPAVL------------SALYNDLNTVSA 364
               +  L + E   S   +    K   G ++   L            SAL +D +T  A
Sbjct: 338 VHTAITTLKKIEFFTSDCNEYICGKLDCGNVNSVELLKCLEDTRQEVNSALADDFDTAKA 397

Query: 365 IQALHKL 371
           + A+ KL
Sbjct: 398 MHAILKL 404


>gi|313126857|ref|YP_004037127.1| cysteinyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293222|gb|ADQ67682.1| cysteinyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 495

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/503 (31%), Positives = 236/503 (46%), Gaps = 77/503 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  +  EF+  D  ++ +YVCG TV D AH+G+AR  +  DV++R L +     
Sbjct: 3   LSVTNTLTGEREEFEPQDDDDVLLYVCGLTVSDDAHLGHARLWMHADVMHRWLEHEG--Y 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+++KI  R   +       D    +    T   ++D   L        PR
Sbjct: 61  TVHHVENFTDVNEKIAARIGDDELGQSEPD----VARHFTDHVIRDMRGLNLKRAEVYPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+PQ+I LI+ +  +G+AYE+N  + FD ++  +YG  S +KI+E +      E+  
Sbjct: 117 VSEHVPQIIDLIETLTENGYAYESNGSVYFDVTAFEDYGKLSNQKIEEMEAQGEADERAE 176

Query: 185 KKNPADFILWKRST---------------PMEPG----WESPWGRGRPGWHIECSAMSSH 225
           K++PADF LWK                  P+E      WESPWG GRPGWHIECSAMS  
Sbjct: 177 KRHPADFALWKAGAVSPDAVAEHRPEELDPIEDACGETWESPWGEGRPGWHIECSAMSMT 236

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           +LG   DIH GG DL+FPHHENE+AQS  A   +  A  W+H G L +E  KMS S GNF
Sbjct: 237 HLGDTIDIHVGGRDLVFPHHENEVAQSEAA-TGQTFARYWLHVGLLQMEDDKMSSSLGNF 295

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
            T+++ L+  +FG       VIR   L T Y     F+   + EAE    +W +      
Sbjct: 296 FTVSDALD--EFG-----VDVIRTFYLSTGYGAEQTFSDSAMAEAE---ERWDRLERAYE 345

Query: 340 ------------TSTSKGIIDPAVLS-------ALYNDLNTVSAIQALHKLAR------E 374
                        S     +  A+ +       A+ +D N   A+ AL +LAR       
Sbjct: 346 TAIEACDSPDAYASVEDADLREAIETTQTDFQKAMNDDFNVREAMAALIELARAVNTHVN 405

Query: 375 STKNHDLLPIFNA-------SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK 424
               +D   +  A          + G+         ++ IA   +  L+  R    +   
Sbjct: 406 DADEYDYRGLREAIETFEDLGGDVFGLSFGDAADGGDVEIAEDLVSLLLNVREAEREAGN 465

Query: 425 FSSADYIRKQLESKGFILEDYKN 447
           +  AD +R +L++ G  + D ++
Sbjct: 466 YERADELRDELDALGVEVHDSED 488


>gi|225351179|ref|ZP_03742202.1| hypothetical protein BIFPSEUDO_02769 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158635|gb|EEG71877.1| hypothetical protein BIFPSEUDO_02769 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 557

 Score =  234 bits (596), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 172/526 (32%), Positives = 249/526 (47%), Gaps = 103/526 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T    ++ F  I P  + MYVCG TV    HIG+ R  + FDV+ R      G K
Sbjct: 39  LKLYDTASHAVSNFTPIKPGQVGMYVCGATVQSSPHIGHIRAAVAFDVVRRWFERL-GYK 97

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKI+++A            I        ++F +    L    PT++PR
Sbjct: 98  -VTFVRNVTDIDDKILDKAAAAGQQWWERAYIY------EREFTEAYNTLGVEPPTYEPR 150

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRKIDE----- 172
           AT H+  MI LI+ II +GH Y   +E       + FD +S P+YG  + +K        
Sbjct: 151 ATGHMIDMIDLIKQIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVADAA 210

Query: 173 ----QKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGRG 211
                 MG  V     +KY+          K +P DF LWK    S P++  W +P+G G
Sbjct: 211 SEVADAMGPSVDNTGNDKYNPVDPADMSEDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGY--DSAARWMHSAWV 328

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q LTEA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAENS----AW---VVRYALGSVQYRSMLEWSDQTLTEAQ 381

Query: 332 ILL------------------SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA------ 367
                                S+    S S   +    ++A+ +D+N   A  A      
Sbjct: 382 SAYDRVSNFIERAGAAVGGQPSREEIVSVSADELPADFVAAMNDDINVSGASAAIFTAIR 441

Query: 368 -----LHKLA----RESTKNHDLLPIFNASAHI--LGIEVCKE--------------HLN 402
                L KLA     +  K+     + N  A +  LG++   E                +
Sbjct: 442 SGNTLLSKLADRVDSDVAKDEVRAVLVNVRAMLDTLGLDPLAEPWVSEGAAGGTAGAGAD 501

Query: 403 KNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILED 444
                A+++LV    +ER    K K F+ AD IR  L + G  +ED
Sbjct: 502 SAEHTALDRLVSEQLEERAEARKAKDFARADAIRDALGAAGIAIED 547


>gi|269839611|ref|YP_003324303.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269791341|gb|ACZ43481.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 785

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/484 (32%), Positives = 241/484 (49%), Gaps = 55/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           +++YNTL R++ E   ++P  IRMY CGPTVY + HIGN R     D + R LLR  Y  
Sbjct: 1   MRLYNTLTRRVEEVVPVEPGRIRMYTCGPTVYRYIHIGNLRSFCTADWIRRALLREGYE- 59

Query: 64  KCVTYVRNITDI-----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
             V +V+NITD+           +DK+   AR+      +      I    T+ F++D  
Sbjct: 60  --VIHVKNITDVGHMRQELLDQGEDKLEAEARR------VGRTPGEIAEFYTRAFMRDEA 111

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
           R+  L  +  PRAT H+ +MI +++ +   G+AY A   + FD + +P YG  S   + E
Sbjct: 112 RMNILPASVFPRATQHVGEMIEIVRELERQGYAYRAGGNVYFDVARLPQYGQLSGNSLPE 171

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
               ++      K++P DF LWK + P     W+SPWGRG PGWHIEC+AM+  YLG   
Sbjct: 172 LT-SSQEDATADKRSPLDFALWKEAEPGRLMAWDSPWGRGFPGWHIECTAMAIKYLGTEI 230

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D IFPHHENE AQS  A    +    W+H   L  +G KMSKS  N  T++++
Sbjct: 231 DIHTGGVDNIFPHHENERAQS-EAYVGHRWVRHWVHTQHLLTDGLKMSKSMSNDYTLDDI 289

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIID 348
           +       R +    +R      HYR  ++FT + L  A+  L +    + +   + +  
Sbjct: 290 V------ARGFEPLALRYLFTTAHYRTRLNFTFRALAGAQTSLRRLRMAALAARDEAVAP 343

Query: 349 P----------AVLSALYNDLNTVSAIQALHKLARES----TKNHDLLPIFNASAHILGI 394
           P          A   +L +DLN  +A+  +  + R S     +   LL  F+    +LG+
Sbjct: 344 PDEEAMRPWREAFDRSLRDDLNLPAAMAVVWDVVRRSGLGPAERAALLAEFD---EVLGL 400

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKK----FSSADYIRKQLESKGFILEDYKNPDN 450
           +V  E  +  + +   + V+E L L    +    ++ AD +R  LE++G  L D +    
Sbjct: 401 DVFAEP-DSGLLLEPRQDVRELLALRAEVRARGDYALADALRSDLEARGVELRDTRQGTR 459

Query: 451 GQRM 454
             R+
Sbjct: 460 AYRL 463


>gi|320355263|ref|YP_004196602.1| cysteine synthase [Desulfobulbus propionicus DSM 2032]
 gi|320123765|gb|ADW19311.1| cysteine synthase [Desulfobulbus propionicus DSM 2032]
          Length = 775

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 159/475 (33%), Positives = 244/475 (51%), Gaps = 54/475 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYG 62
           +++++NT+ RK   FQ I  + + +Y CGPT  +  +I + R +IV D++ R LL   Y 
Sbjct: 306 QLRLFNTMTRKKEVFQPIRDNRVTLYACGPTAAESPNIAHCRRLIVADLINRSLLAQGY- 364

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V    N TD+DD  I  A      I     +   T +   +F +    L     T  
Sbjct: 365 --AVELYMNFTDLDDNTITGA------IDAGADLREFTGRYIDEFKQAIEALNVQQATGY 416

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-E 181
           P A+ H+  MI +  ++I  G+AYE    I FD S   +YG  S   + + K+G  V  +
Sbjct: 417 PLASEHVGHMIEIAHDLIHKGYAYEKLGSIYFDISKFKHYGRLSGIDLSKIKIGQTVDLD 476

Query: 182 KYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            Y K NP DF L KRST  E      +E+ WG  RPGWHIECSAMS++YLG+  DIH   
Sbjct: 477 NYEKDNPRDFTLLKRSTLAELKKGIFYETDWGNIRPGWHIECSAMSTNYLGETIDIHTAS 536

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENEIA +  A   +  AN W+H+G L ++GRKM+K  GN +T+ E+L+ + +
Sbjct: 537 QDLLFPHHENEIAIA-EALTGKPLANYWLHSGQLLMDGRKMAKETGNVVTLREVLD-RGY 594

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL----- 352
           GGR      +R  +L  HYR+P+ F+ +RL  A   L +  +  T K +  PA L     
Sbjct: 595 GGRE-----LRFMLLGVHYRKPLLFSFKRLNAARTALRRIDEY-TRKLLCLPAGLPHPEL 648

Query: 353 ------------SALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
                        A+ +DLN   AI AL    +++            + +D+L       
Sbjct: 649 ASYVSELEQRFHDAINDDLNISGAIGALFNFIKQTNPVVQARQLDRDQKNDVLEALRMVN 708

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LG+ +  EH    ++  I++L+++R    ++K +++AD  R++L  KG  + D
Sbjct: 709 TVLGV-LRLEHC--PLTPEIDRLIRQRERARQLKDWTAADSAREELLRKGVTIVD 760


>gi|78061440|ref|YP_371348.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
 gi|109894878|sp|Q39A07|SYC1_BURS3 RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|77969325|gb|ABB10704.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 470

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 161/467 (34%), Positives = 231/467 (49%), Gaps = 31/467 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL-RYYYGE 63
           + +Y+T  R +  F  I    + MY CGPTVYD AHIGN R  +  D+L R+L R  Y  
Sbjct: 3   LALYDTWSRTVRPFTPIRAGQVGMYGCGPTVYDDAHIGNLRTYVFEDLLRRVLERNGY-- 60

Query: 64  KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             V +V NITD+     D      + E  S    ++   I  + T+ FV+D   L  L P
Sbjct: 61  -AVRHVVNITDVGHLTSDADEGEDKMEKGSRRTGESAWAIARRYTEAFVRDWHALNLLEP 119

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T   RAT+HI + I  I+ +   G+ Y  ++ + FDTS   +YG  +R      + G RV
Sbjct: 120 TIWCRATDHIAEQIAFIETLDRAGYVYRTDDGLYFDTSRQDDYGYLARLDRAGLQAGKRV 179

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K++  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ YLG +FDIH G
Sbjct: 180 ALG-GKRSITDFALWKFSPADVQRQMEWDSPWGRGFPGWHIECSAMSAKYLGTLFDIHCG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETK 295
           G D I  HH NEIAQ+  A   +  AN W+H  FL L+   KMSKS+G+F+ +  L    
Sbjct: 239 GEDHIAVHHSNEIAQTRAAHGTQ-LANYWMHGHFLTLDVHTKMSKSSGDFVRLQTLQR-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIID 348
               R       R   L  HYR  + FT + L  A+  L++       WP          
Sbjct: 296 ----RGVDPLAYRYLCLTAHYRSKLHFTWESLDAAQTALNRLRHLYIGWPDGGRVDADFA 351

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH-LNKNISI 407
               + +  DLN   A+  L  L R +     L    ++   +LG+ + +   +  ++  
Sbjct: 352 ARFDAEVNEDLNLPRALAVLWDLVRSNLPPATLKATVDSFDMVLGLGLREWRPVAVDVPE 411

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            +  L+ ER      K ++ AD IR+ L ++G+ +ED   P+ GQR+
Sbjct: 412 HVRALLGERARARAEKDWAQADRIREALSAEGWRVED--TPE-GQRL 455


>gi|312381823|gb|EFR27474.1| hypothetical protein AND_05800 [Anopheles darlingi]
          Length = 1017

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 154/448 (34%), Positives = 223/448 (49%), Gaps = 63/448 (14%)

Query: 20  AIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           +I+P    +  Y CGPTVYD AHIG+A   +  D+L R+L++++    VT + NITDIDD
Sbjct: 521 SINPQKPFLSFYTCGPTVYDSAHIGHASCYVRLDILQRILKHHFQLPLVTAM-NITDIDD 579

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KII RA +             +  K   +F  D T L    P  + R T HIP ++  +Q
Sbjct: 580 KIIARANERGMDW------QALARKYEAEFWNDLTNLNVQPPDVKLRVTEHIPAIVRFVQ 633

Query: 138 NIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
            +I  G+AY A++  + F+TS    YG   +  ++  +      E   K++P+DF LWK 
Sbjct: 634 TLIDKGYAYRADDGSVYFETSKYERYGKLQKVILEPAQ------ESRFKRHPSDFALWKA 687

Query: 197 STPMEPGWESPW-----GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           S P EP W           GRPGWHIECS M+SH  GK  D H GGLDL FPHHENE  Q
Sbjct: 688 SKPGEPAWSGEGEAVSVTSGRPGWHIECSTMASHVFGKRLDFHAGGLDLRFPHHENEETQ 747

Query: 252 SCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           SCC   +      WIH G L+LEG+  KMSKS  N I+I+ELL+          A   R+
Sbjct: 748 SCCYHDVPDWVTHWIHTGQLHLEGQTHKMSKSLKNTISISELLQEHT-------ADEFRM 800

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQT----STSKGIID-- 348
             L++HYR  I++  + +  A  +L K+               PQT    S+ + + D  
Sbjct: 801 LCLLSHYRSVIEYGSESMATASNVLRKFISFFQDSKAYVDGLKPQTYGNGSSEENLFDCL 860

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH--ILGIEVCKEHLN 402
                 V + L ND NT +++ AL  L   + K  +        AH  ++G        N
Sbjct: 861 AKTRNIVEACLTNDFNTANSVLALSDLISTAQKAINGNEQLGDGAHPRLIGAS------N 914

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADY 430
               +A+ + V+E+L+   ++ F  + +
Sbjct: 915 IGAVLAVTRYVREQLLSYGLQSFERSTH 942


>gi|150398926|ref|YP_001322693.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150011629|gb|ABR54081.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 459

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 163/475 (34%), Positives = 241/475 (50%), Gaps = 50/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +K   F     + ++++VCGPT Y  +HIG+AR  I FD + R L+Y     
Sbjct: 2   LQIYNTLSKKEELFLPNHQNIVKLFVCGPTTYAESHIGHARTYIAFDAIVRYLKYL--GY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII++A+ +  + P      +++    +++++D   L         R
Sbjct: 60  TVFYLQNITDIDDKIIDKAKIQSKN-P-----DLLSKHYEKKYLEDMENLGVNNVNFYAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H  ++I  ++ +I  G AYE  N + F+ S    +G  S + I+E  +    P+   
Sbjct: 114 ATEHTFEIINQVKILIEKGFAYETENGVYFEVSKFQEFGKLSNQNIEELNVHRVNPDGL- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+  DF+LWK+ +  +P W+SPWG GRPGWHIE +A++  Y G  +DIHGGGLDLIFPH
Sbjct: 173 KKDVKDFVLWKKVSE-KPCWDSPWGFGRPGWHIEDTAITEKYFGPKYDIHGGGLDLIFPH 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ       +     W+H GFLN+ G KMSKS  NFITI E+LE        + A
Sbjct: 232 HEAEIAQMESISGEKPMVKYWMHTGFLNVNGTKMSKSLSNFITIKEILE-------KYNA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
              R  +L THYR PIDF+ + L  ++    +      S     P +             
Sbjct: 285 LEFRFFVLSTHYRSPIDFSSENLEASKKSFERITNFIKSTEFFIPILEIEHENDDLVEQN 344

Query: 352 --------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-----------AHIL 392
                     A+ ND NT  AI A+    R   K+ +   I   S             +L
Sbjct: 345 IKFTKEKFFDAMNNDFNTPLAISAIFGYVRFINKHLNDKNISKKSLLKSSELIFELMQVL 404

Query: 393 GIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           G E+     N KN    ++ ++  R  L + K++  +DYIR +L      ++D K
Sbjct: 405 GFEIKTNLKNDKNAEELLDLILNVRSKLREKKEWEISDYIRNRLNEINIKIDDIK 459


>gi|114052012|ref|NP_001039409.1| cysteinyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|115502846|sp|Q2KIF8|SYCM_BOVIN RecName: Full=Cysteinyl-tRNA synthetase, mitochondrial; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|86826764|gb|AAI12655.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Bos taurus]
          Length = 555

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 160/497 (32%), Positives = 238/497 (47%), Gaps = 67/497 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 44  VKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVFG-- 101

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V  V  ITD+DDKII RA +      ++ + + +     + F +D   L  L PT   
Sbjct: 102 CTVVMVMGITDVDDKIIRRANE------MSVSPASLARLYEEDFKQDMAALKVLPPTAYL 155

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T H+PQ++  I+ +I +GHAY  A   + FD  S  + YG      +    +G   P 
Sbjct: 156 RVTEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGDRYGKLV--GVAPGPVGE--PV 211

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P EP W SPWG GRPGWHIECS ++S   G   DIH GG+DL 
Sbjct: 212 DSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIHSGGVDLA 271

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ     +  +  N ++H+G L+++  G KMSKS  N++TI + L       
Sbjct: 272 FPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYVTIKDFL------- 324

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------- 336
           RS    V RL  L + YR  ID++   L EA  LL                         
Sbjct: 325 RSTSPDVFRLFCLRSSYRSAIDYSEGALLEARSLLRATAAFVEDARAYLRGQLAGGPIQE 384

Query: 337 ---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---PIFNASAH 390
              W +   +K     AV +AL +D +TV A+ A+  L     +        P    S  
Sbjct: 385 DVLWERLGRTKA----AVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPA 440

Query: 391 ILGIEVCK-EHLNKNISIAIEKLVQERLILLKMKKFSS-----ADYIRKQLESKGFILED 444
           +LG  V   EH  + + +++     ER  +      ++      + +R +L+ + F L  
Sbjct: 441 VLGAVVASVEHFFETVGVSL----AERQCVPGAGSPAALYSLVEELVRFRLKVRQFALAS 496

Query: 445 YKNPDNGQRMTRWKQKP 461
            + P   +R    +++P
Sbjct: 497 GEAPGEARRQRLLERQP 513


>gi|303390212|ref|XP_003073337.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302483|gb|ADM11977.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 482

 Score =  233 bits (593), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 123/294 (41%), Positives = 174/294 (59%), Gaps = 8/294 (2%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + +K+YN++ +    F     + ++MY+CGPTVYD  HIG+AR  ++FDV+ R+L  Y
Sbjct: 3   MDRTLKLYNSISKTSEVFIPRRDNEVKMYICGPTVYDSPHIGHARTYVMFDVIRRVLSDY 62

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V +V NITDIDDKII RA +   S+        +T K T++F +D   L    P+
Sbjct: 63  L-RYNVNFVMNITDIDDKIIVRANETGVSM------DEVTRKYTEEFFEDMKALNVRPPS 115

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
                T+++ ++I  I+ + ++G AYE+   + F+ +   +   +   K ++  + T   
Sbjct: 116 FVTFVTSYVDKIIKFIEKLEVNGFAYESEGSVYFNLNKYQDKHGYPLFK-NKDGINTEGD 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K+NP DF+LWK+S   EP +ES WG GRPGWHIECS MSS  LG+  DIH GG+DL
Sbjct: 175 ENKDKRNPCDFVLWKKSKENEPRYESKWGYGRPGWHIECSVMSSDILGEDLDIHAGGIDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHHENEIAQ       E     ++H G LN++G KMSKS  NF TI E LE 
Sbjct: 235 AFPHHENEIAQCQAYFMKEPWVKCFLHTGHLNIDGLKMSKSLKNFTTIKEALEV 288


>gi|23464902|ref|NP_695505.1| cysteinyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|61216350|sp|Q8G7G5|SYC_BIFLO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|23325493|gb|AAN24141.1| cysteinyl-tRNA synthetase 1 [Bifidobacterium longum NCC2705]
          Length = 546

 Score =  233 bits (593), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 174/548 (31%), Positives = 253/548 (46%), Gaps = 120/548 (21%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R  L+  Y
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+ +A                     ++F +    L  L PT 
Sbjct: 89  ---KVTFVRNVTDIDDKILVKAAA------AGQRWWARAYYYEREFTEAYNTLGVLPPTV 139

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK----I 170
           +PRAT H+  MI LIQ I+ +GH Y       +    + FD +S P+YG  + +K    +
Sbjct: 140 EPRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEV 199

Query: 171 DE-----QKMGTRV----PEKYH----------KKNPADFILWKR---STPMEPGWESPW 208
           DE      +MG  V     +KY+          K +P DF LWK    + P +  W +P+
Sbjct: 200 DEAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPF 259

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+
Sbjct: 260 GVGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHS 317

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L 
Sbjct: 318 AWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALV 370

Query: 329 EAE--------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQA--- 367
           EA+              + L   P      + S   +    ++A+ +D+N   A  A   
Sbjct: 371 EAQAAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFT 430

Query: 368 --------LHKLA------------RES---------TKNHDLL--PIFNASAHILGIEV 396
                   L +LA            RE+         T   D L  P  +A     G   
Sbjct: 431 AIRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGGAADGTAE 490

Query: 397 CKEHLNKNISIAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             EH       A+E L+ E+L       K K F+ AD IR  L   G  +ED      G 
Sbjct: 491 SPEH------AALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GP 538

Query: 453 RMTRWKQK 460
           + + W  K
Sbjct: 539 QGSTWSLK 546


>gi|57167801|ref|ZP_00366941.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020923|gb|EAL57587.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 460

 Score =  233 bits (593), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 152/458 (33%), Positives = 228/458 (49%), Gaps = 55/458 (12%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  N+ +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDQDNVNIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LSLGYR-VQFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  +   S+  N+ +    +     + +D   L  L P  +PRAT +I  M+ LI  + 
Sbjct: 72  KKMSESGKSL--NELVEFYIA----NYERDMKALNVLEPDFKPRATYYIEPMLDLIHKLS 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
            +G  Y   + + FDTS   +Y S S R  +E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENV--SRLSNEVEKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  ++S +G+GRPGWH EC AM     G   DIH GG+DL+FPHHENE AQ  CA +   
Sbjct: 181 ENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGVDLLFPHHENEAAQCRCACK-RT 239

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A IW+HNGF+ + G KMSKS  N   + + L  K F G +     +R  +L +HYR   
Sbjct: 240 LAKIWLHNGFVKINGEKMSKSLNNSFFLKDAL--KDFMGEA-----LRFYLLSSHYRAHF 292

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGI-----------------IDPAVLSALYNDLNTVS 363
           ++++  L   +  L K+ +      +                 I   +L  L +DLN   
Sbjct: 293 NYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHSNIAKQILEVLSDDLNISK 352

Query: 364 AIQALHKL-------ARESTKNHDL----LPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L +          + +KN +L        +  A I G     E+L       K + 
Sbjct: 353 ALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIFGFGFMDENLYFQWGVAKELK 412

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             I+  + +R    K K F+ AD IR+ L   G  L+D
Sbjct: 413 EKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQD 450


>gi|269861043|ref|XP_002650237.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066327|gb|EED43813.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 500

 Score =  233 bits (593), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 150/380 (39%), Positives = 217/380 (57%), Gaps = 24/380 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +Y+++ +K  EF   DP+N++MYVCGPTVYD  HIG+AR  I FD++ ++L  Y+ 
Sbjct: 4   KSILLYDSISKKKIEFIPDDPTNVKMYVCGPTVYDSPHIGHARTYISFDIIRKILENYF- 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+V NITDIDDKII R+++++   PI   +S I  K   +F  D  +L    P   
Sbjct: 63  EYNVTFVMNITDIDDKIIIRSKEKNLD-PI--QLSQIYEK---EFFDDMDKLKVKRPDFI 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS---IPNYGSFSRRKIDEQKMGTRV 179
            R T HIPQ+I  IQ +  +G  Y +N  + FD      I  Y       I++  + T V
Sbjct: 117 TRVTEHIPQIINFIQKLENNGLTYVSNGSVYFDLKKYKKIFKYNVLRLSGIEQHLIDTTV 176

Query: 180 PE--KYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                  KK+  DF LWK      E  + SPWG GRPGWHIECS MS+H  G   DIHGG
Sbjct: 177 KSIISTEKKSLDDFALWKNVVNKDELKFHSPWGEGRPGWHIECSVMSTHIFGSKLDIHGG 236

Query: 237 GLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           G+DL+FPHHENEIAQ  C      T    ++H G LN++GRKMSKS  NF+TI+E++   
Sbjct: 237 GIDLMFPHHENEIAQ--CQGYFNDTWVKYFLHTGHLNIDGRKMSKSLKNFLTISEII--- 291

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSA 354
                ++    IR+  L  H+  P++++ ++L  A++   K +   ST++ II    L+ 
Sbjct: 292 ----NNYSGITIRILFLQHHWNSPMNYSEEQLKRADVTRKKIFNFISTAESIITQQKLNN 347

Query: 355 LYNDLNTVSAIQALHKLARE 374
           + N   +   I+++  + +E
Sbjct: 348 INNFQKSNPYIRSMTSVDKE 367


>gi|118475287|ref|YP_891963.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166200140|sp|A0RP30|SYC_CAMFF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118414513|gb|ABK82933.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 459

 Score =  232 bits (592), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 156/459 (33%), Positives = 231/459 (50%), Gaps = 51/459 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+++ ++  EF+ I      +YVCGPTVYD AH+G+A+  I FD+L R L+   G K V
Sbjct: 3   IYDSILKQKVEFKPIREYEANIYVCGPTVYDDAHLGHAKSSISFDLLRRTLK-SLGYK-V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +++N TDIDDKI+++  Q   S+        IT+    ++  D   L       +P+AT
Sbjct: 61  KFIKNFTDIDDKILKKMSQTGKSLE------DITNHYISRYKADMYALNVADADIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +  +I  I  +  +G AY+ ++ I FDTS    Y S S RK  ++ +  RV  K  KK
Sbjct: 115 TSLTSIINYITTLFENGWAYKIDDGIYFDTSKDDKYLSLSGRK--DENLIARVASKDEKK 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM-SSHYLGKV---FDIHGGGLDLIF 242
           +  DF+LWK     E  ++SP+GRGRPGWH EC AM   H+ G      DIH GG DL+F
Sbjct: 173 DEKDFVLWKFD---ENWYDSPFGRGRPGWHSECVAMIKDHFCGSCEFEIDIHAGGADLLF 229

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQ  CA   +  A  W+HNGF+ +   KMSKS GN   I + LE         
Sbjct: 230 PHHENEAAQCRCAYN-KNLAKYWMHNGFVQVNNEKMSKSLGNSFFIKDALELV------- 281

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAVLS 353
           P   +R  ++ +HYR   ++ +  L  ++  L K           +TS +       +L 
Sbjct: 282 PGEALRFYLMSSHYRANFNYDIDDLKSSKKRLDKIYRLKKRLIGVKTSKTDAKFKKDILD 341

Query: 354 ALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNAS----AHILGIEVCKEH-- 400
           A+ +DLN   A+  L ++   +        KN D   I  ++      +LGI    E   
Sbjct: 342 AMSDDLNISVALAILDEMVNNANAKLDNEPKNRDFKQILVSNLEFVKELLGILYIDEFKW 401

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               ++ ++   I  L+ +R +  K K F  AD IR +L
Sbjct: 402 FQWGVDDSLKQEISVLIDQRNMAKKDKNFILADQIRDKL 440


>gi|305432177|ref|ZP_07401341.1| cysteine--tRNA ligase [Campylobacter coli JV20]
 gi|304444720|gb|EFM37369.1| cysteine--tRNA ligase [Campylobacter coli JV20]
          Length = 457

 Score =  232 bits (592), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 152/458 (33%), Positives = 228/458 (49%), Gaps = 55/458 (12%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  N+ +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 11  LDQDNVNIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LSLGYR-VQFARNYTDIDDKIL 68

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  +   S+  N+ +    +     + +D   L  L P  +PRAT +I  M+ LI  + 
Sbjct: 69  KKMSESGKSL--NELVEFYIA----NYERDMKALNVLEPDFKPRATYYIEPMLDLIHKLS 122

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
            +G  Y   + + FDTS   +Y S S R  +E    +R+  +  K+N +DF+LWK     
Sbjct: 123 KNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENV--SRLSNEVEKRNESDFVLWKFD--- 177

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           E  ++S +G+GRPGWH EC AM     G   DIH GG+DL+FPHHENE AQ  CA +   
Sbjct: 178 ENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGVDLLFPHHENEAAQCRCACK-RT 236

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A IW+HNGF+ + G KMSKS  N   + + L  K F G +     +R  +L +HYR   
Sbjct: 237 LAKIWLHNGFVKINGEKMSKSLNNSFFLKDAL--KDFMGEA-----LRFYLLSSHYRAHF 289

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGI-----------------IDPAVLSALYNDLNTVS 363
           ++++  L   +  L K+ +      +                 I   +L  L +DLN   
Sbjct: 290 NYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHSNIAKQILEVLSDDLNISK 349

Query: 364 AIQALHKL-------ARESTKNHDL----LPIFNASAHILGIEVCKEHL------NKNIS 406
           A+  L +          + +KN +L        +  A I G     E+L       K + 
Sbjct: 350 ALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIFGFGFMDENLYFQWGVAKELK 409

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             I+  + +R    K K F+ AD IR+ L   G  L+D
Sbjct: 410 EKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQD 447


>gi|291542167|emb|CBL15277.1| cysteinyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 468

 Score =  232 bits (592), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 157/474 (33%), Positives = 232/474 (48%), Gaps = 49/474 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L +   EF    P  + MY CGPTVY +AHIGN R  I+ DVL + LR+   +  V
Sbjct: 3   LYNSLGQTKQEFVPHTPGKVNMYTCGPTVYHYAHIGNLRTYIMEDVLEKYLRFSGYD--V 60

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             V NITD+          +DK++  A++EH ++        I    T  F  D  +L  
Sbjct: 61  NRVMNITDVGHLSSDADTGEDKMLSGAKREHKTV------MEIAKFYTDAFFADCEKLNI 114

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P     ATN I   I +I  ++  G+AY A   + FDTS + NY  F     D+  +G
Sbjct: 115 KRPDVVEPATNCIDDFINMISVLLEKGYAYIAGGNVYFDTSKLDNYYVFGNMNEDDLAVG 174

Query: 177 TR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            R  V E  +K+N ADF+LW    +    E  WESPWG G PGWHIECS +S  + G+  
Sbjct: 175 VRDSVEEDENKRNKADFVLWFTKSKFDSQELKWESPWGVGYPGWHIECSCISYKHCGEYL 234

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D  FPHH NEIAQS  A    K    W H   LN    KMSKS G F+T++ L
Sbjct: 235 DIHCGGIDNAFPHHTNEIAQS-EAFLGHKWCPYWFHVLHLNDARGKMSKSKGGFLTVS-L 292

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQ 339
           LE K +        V R+  L +HYR+P+ F+   L       +K             P 
Sbjct: 293 LEEKGYN-----PLVYRMFCLQSHYRKPLTFSYDNLDNTATAYNKLVKRISALSRDGEPD 347

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC-- 397
            + ++ +       AL NDLNT  A+  ++ + +    +   L +      +L +++   
Sbjct: 348 MAKAEELT-KGFSEALDNDLNTSLALTCVYDVLKADADDATKLYVIGEFDKVLSLDLTKV 406

Query: 398 ----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               K   + + +  +E+L+ +R      K +++AD IR +L+    +++D K+
Sbjct: 407 PESNKADADDDFAKEVEELIAQRTKARAEKDWATADAIRDKLKEMKVVVKDTKD 460


>gi|115502847|sp|Q8BYM8|SYCM_MOUSE RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|148690122|gb|EDL22069.1| mCG11180, isoform CRA_e [Mus musculus]
          Length = 551

 Score =  232 bits (592), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 210/405 (51%), Gaps = 54/405 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYL 148

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 149 RVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAEPG 204

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+DL 
Sbjct: 205 DSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLA 264

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T     
Sbjct: 265 FPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT----- 319

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------- 336
             +   V RL  L T+YR  I+++   L EA+ LL                         
Sbjct: 320 --FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPVEE 377

Query: 337 ---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
              W + +++K     AV +AL ND +T  A+  +  L   + + 
Sbjct: 378 DVLWERLTSTK----KAVKAALANDFDTPRAVNTILDLVHHANRQ 418


>gi|189234350|ref|XP_973716.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 501

 Score =  232 bits (592), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 144/391 (36%), Positives = 203/391 (51%), Gaps = 45/391 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N   R        + + +  Y CGPTVYD +HIG+A   +  D++ RLLR+Y+   
Sbjct: 26  IKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKLDIIQRLLRHYFNLN 85

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT V NITDIDDKII RA      +P  +    +  K   +F KD   L    P    R
Sbjct: 86  VVT-VMNITDIDDKIIARANT--AKVPPKE----LAKKFEAEFWKDLDALDVRRPDCVLR 138

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-K 182
            T ++  +   I+ +I  G AY+A +N + FD  +  NY          Q +G   PE  
Sbjct: 139 VTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYDNYAKL-------QNIGEDAPEPS 191

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+  DF LWK + P E  W S WG+GRPGWHIECSA++ H LG   DIH GG+DL F
Sbjct: 192 KFKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHVLGPEIDIHAGGIDLRF 251

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENE AQSC      +  N W+H G L+L + +KMSKS  N I+I+ +LE        
Sbjct: 252 PHHENEEAQSCARYCRPQWVNYWLHTGHLHLKDSQKMSKSLHNTISISSMLEDT------ 305

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQTST 342
             AP  R+A LM+HYR  ++++ + +  A  +L  +                      + 
Sbjct: 306 -TAPAFRMACLMSHYRSRMEYSNEFVITASKVLQNYINFVDNCQNYLNGYLKADVDNDTV 364

Query: 343 SKGIIDPA--VLSALYNDLNTVSAIQALHKL 371
           SK +++ A  + SAL +D NT   I  +++L
Sbjct: 365 SKLVVESANKIHSALIDDFNTSEVISTINEL 395


>gi|224282426|ref|ZP_03645748.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 540

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 165/532 (31%), Positives = 249/532 (46%), Gaps = 118/532 (22%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +LR  Y  
Sbjct: 25  LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGY-- 82

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN--------TQQFVKDTTRLA 115
             VT+VRN+TDIDDKI+++A               +  +          ++F +    L 
Sbjct: 83  -QVTFVRNVTDIDDKILDKA--------------AVAGQQWWARAYFYEREFTQAYDTLG 127

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRR 168
            L PT++PRAT H+  MI LI+ II +GH Y       +    + FD +S P+YG  + +
Sbjct: 128 VLPPTYEPRATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQ 187

Query: 169 K----------IDEQKMGTRVP----EKYH----------KKNPADFILWKRSTPMEPG- 203
           K              +MG  V     +KY+          K +P DF LWK   P +P  
Sbjct: 188 KQGAAEADEAAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQD 247

Query: 204 --WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
             W +P+G GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A    ++
Sbjct: 248 ARWSTPFGVGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGY--ES 305

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
           A  W+H+ ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++
Sbjct: 306 AARWMHSAWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLE 358

Query: 322 FTVQRLTEAE--------------ILLSKWPQTSTSKGI----IDPAVLSALYNDLNTVS 363
           ++ Q L EA+              + L + P+ +   G+    +    +SA+ +D+N   
Sbjct: 359 WSDQALVEAQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSG 418

Query: 364 AIQALHKLARES----TKNHDLLPIFNASAHI-------------LGIEVCKEHLNKNIS 406
           A  A+    R      +K  D      A A +             LG++   E       
Sbjct: 419 ATAAIFTAIRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAG 478

Query: 407 I----------AIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILED 444
                       ++ L+ E+L       K + F+ AD IR  L + G  +ED
Sbjct: 479 ADGNGESREHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED 530


>gi|315638875|ref|ZP_07894047.1| cysteine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481093|gb|EFU71725.1| cysteine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 454

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/447 (35%), Positives = 226/447 (50%), Gaps = 50/447 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I MY+CGPTVYD AH+G+AR  I FD+L R+L    G K + + RN TDIDDKI+++ ++
Sbjct: 20  ITMYLCGPTVYDNAHLGHARSSICFDLLRRVL-LSLGRK-LYFARNYTDIDDKILKKMQE 77

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              S+        IT K    + +D   L  L P  +P+AT +I QMI LI ++   G  
Sbjct: 78  SGESLEQ------ITQKYIAHYERDMKNLRVLEPDLKPKATEYIKQMIELILHLQRQGFT 131

Query: 146 YEANNEIIFDTSSIPNYGSFSRRK-IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           Y   + I FDTS    Y S S+R  +D Q   TR+  +  KKN +DF+LWK     E  +
Sbjct: 132 YTLEDGIYFDTSKDKEYLSLSKRGFMDNQ---TRLIAQKEKKNESDFVLWKFD---EGFY 185

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            +P+G+GRPGWH EC AM         DIH GG+DL FPHHENE AQ  CA   +  A+ 
Sbjct: 186 AAPFGKGRPGWHSECVAMIEALFKDSLDIHAGGVDLFFPHHENEAAQCRCAFN-KNLASH 244

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+HNGF+N+ G KMSKS  N   I + L  K+F G +     +R  ++  HYR   ++++
Sbjct: 245 WLHNGFVNINGEKMSKSLNNSFFIKDAL--KEFSGEA-----LRFYLMSVHYRAHFNYSL 297

Query: 325 QRLTEAEILLSKWPQTSTSKGI-------------IDPAVLSALYNDLNTVSAIQALH-- 369
           + L+  +  L K  +      +             +   +L AL +DLN   A+  L   
Sbjct: 298 EDLSLCKKRLDKLYRLKKRLDLNSLEDKPKKCERELSLTILQALQDDLNISKALALLDEF 357

Query: 370 ------KLARESTKNHDLLPIFNASAHILGI--EVCKEHLNKNIS---IA-IEKLVQERL 417
                 KL         L   F   A I G+  E    +  +  S   IA IE  + +R 
Sbjct: 358 IANANLKLDENKALKEGLREDFKELAFIFGVGFEDVILYFQQGFSEEQIAWIETQITKRS 417

Query: 418 ILLKMKKFSSADYIRKQLESKGFILED 444
              K K ++ AD +R+ L   G +L D
Sbjct: 418 EAKKAKDYALADKLRQDLAEFGVVLLD 444


>gi|26332939|dbj|BAC30187.1| unnamed protein product [Mus musculus]
          Length = 581

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 144/405 (35%), Positives = 210/405 (51%), Gaps = 54/405 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 67  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 124

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   
Sbjct: 125 CNVVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYL 178

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 179 RVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAEPG 234

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+DL 
Sbjct: 235 DSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLA 294

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T     
Sbjct: 295 FPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT----- 349

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------- 336
             +   V RL  L T+YR  I+++   L EA+ LL                         
Sbjct: 350 --FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPVEE 407

Query: 337 ---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
              W + +++K     AV +AL ND +T  A+  +  L   + + 
Sbjct: 408 DVLWERLTSTK----KAVKAALANDFDTPRAVNTILDLVHHANRQ 448


>gi|225010586|ref|ZP_03701057.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005415|gb|EEG43366.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 492

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 169/483 (34%), Positives = 239/483 (49%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  K   F  I    + MYVCGPTVY   H+GN R  + FD+++R L++  G K
Sbjct: 9   LKIYNSLSGKKEIFTPITAGYVGMYVCGPTVYSQVHLGNCRTFMSFDMIFRYLKHL-GFK 67

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD           +DKI ++AR E    P+      +  K T  F    T+ 
Sbjct: 68  -VRYVRNITDAGHLENDAEEGEDKIAKKARLEQIE-PME-----VVQKYTVDFHNILTQF 120

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKID 171
             L P+ +P AT HI + I +I  II  G+AY  N  + FD    +   +YG  S RK++
Sbjct: 121 NLLPPSIEPTATGHIIEQIQIIDEIIAKGYAYHVNGSVYFDVQKFNETNDYGKLSGRKLE 180

Query: 172 EQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +    TR +  +  KK+P DF LWK++ P     W S WG G PGWH+EC+AMS+ YLGK
Sbjct: 181 DMLANTRSLTAQDEKKSPQDFALWKKAEPQHIMRWHSKWGDGFPGWHLECTAMSTKYLGK 240

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGG+DL FPHHE EIAQ+   + +      W+H   L L G+KMSKS  N I   
Sbjct: 241 TFDIHGGGMDLKFPHHECEIAQAEATNGVSPV-KYWMHANMLTLNGKKMSKSTDNNILPG 299

Query: 290 ELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQ----- 339
           E+   +     + + A V+R  M+  HY   +D + + L  +E     L+  + Q     
Sbjct: 300 EIFSGENNILSKPFTASVLRFFMMQAHYTSILDLSNEALLASEKGHARLMEAFKQLDSVV 359

Query: 340 ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE----STKNHDLLPIFNA---- 387
               T       +    SA+ +D NT   I  L +  +E       NH +     A    
Sbjct: 360 VGNHTDFDLKSWEDKCYSAMNDDFNTPILIAHLFEGVKEINLLKEGNHQISQADKAHFTA 419

Query: 388 --SAHILGIEVCKEHL----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              A +L +   KE +    N      +E L++ R      K F+++D IR QL + G  
Sbjct: 420 LLKAFVLDVLGLKEGVEMATNSQTPALVEMLIKLRKEARDNKDFATSDAIRDQLLALGIQ 479

Query: 442 LED 444
           L+D
Sbjct: 480 LKD 482


>gi|260062016|ref|YP_003195096.1| cysteinyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783578|gb|EAR14749.1| cysteinyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 492

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/497 (31%), Positives = 241/497 (48%), Gaps = 69/497 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +K++N+L      F  I   ++ MYVCGPTVY   H+GN R  + FD+++R LR+  
Sbjct: 6   EQTLKVHNSLTGTKETFTPIHEGHVGMYVCGPTVYSNVHLGNCRTFMSFDLIFRYLRHL- 64

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           G K V +VRNITD           +DKI ++AR E    P+      +  + T  F    
Sbjct: 65  GYK-VRFVRNITDAGHLEDDADQGEDKIAKKARLEKIE-PME-----VVQRYTVDFHNIL 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRR 168
            R   L P+ +P AT HI + I +I+ I+  G+AYE N  + FD         YG  S R
Sbjct: 118 QRFNLLPPSIEPTATGHIVEQIEIIKVIMGRGYAYEKNGSVYFDVKRFNQDYEYGKLSGR 177

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
           K+++    TR +  +  K+NP DF LWK++ P     W SPWG G PGWH+EC+ MS+ Y
Sbjct: 178 KLEDMIANTRELTAQDEKRNPQDFALWKKAEPQHIMRWPSPWGEGFPGWHLECTVMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG+DL FPHHE EIAQ+   +  +     W+H   L L G+KM+KS GN +
Sbjct: 238 LGDTFDIHGGGMDLKFPHHECEIAQAEAGND-QSPVRYWLHANMLTLNGKKMAKSTGNNL 296

Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLS 335
              E+   +     + +   V+R  M+  HY   +D + +          RL EA   L 
Sbjct: 297 LPGEIFSGENDILSKPFAPTVVRFFMMQAHYTSILDLSDEALLAAEKGYNRLMEAMEQLP 356

Query: 336 KWPQTSTSKGII----------------DPAVLSALYNDLNTVSAI----QALHKLARES 375
             P   TS   +                 P +++ L+  + T++ +    Q+L    R++
Sbjct: 357 GLPTGKTSDFDVAAWRQRCYDAMNDDFNSPVLIAQLFEAVKTINLVRDGKQSLSPADRDT 416

Query: 376 TKNHDLLPIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
            +      +   +  +LG+E  +      E L   + + I+   Q R      K + ++D
Sbjct: 417 LQE----TMEGFAFEVLGLEPGRSQTQETEKLEGVMKLVIDLRNQAR----ANKDYHTSD 468

Query: 430 YIRKQLESKGFILEDYK 446
            IR  L   G  L+D K
Sbjct: 469 QIRDTLSELGIQLKDGK 485


>gi|306823683|ref|ZP_07457058.1| cysteine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802923|ref|ZP_07697024.1| cysteine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304553390|gb|EFM41302.1| cysteine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220390|gb|EFO76701.1| cysteine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 557

 Score =  232 bits (591), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 169/526 (32%), Positives = 252/526 (47%), Gaps = 103/526 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T    ++ F  + P  + +YVCG TV    HIG+ R  + FDV+ R  +   G K
Sbjct: 39  LKLYDTASHTVSSFVPLKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFQRL-GYK 97

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRN+TDIDDKI+++A            I        ++F +    L    PT++PR
Sbjct: 98  -ITFVRNVTDIDDKILDKAAAAGQQWWERAYIY------EREFTEAYDALGVEPPTYEPR 150

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRK-----IDE 172
           AT H+  MI LI+ II +GH Y   +E       + FD +S P+YG  + +K      D 
Sbjct: 151 ATGHMIDMIDLIRKIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVSDDA 210

Query: 173 QK----MGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGRG 211
            K    MG  V     +KY+          K +P DF LWK    S P++  W +P+G G
Sbjct: 211 SKITDAMGPSVDNAGDDKYNPIDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGY--DSAARWMHSAWV 328

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L EA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAENS----AW---VVRYALGSVQYRSMLEWSDQTLAEAQ 381

Query: 332 --------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQA------ 367
                           + + P      + S   +    ++A+ +D+N   AI A      
Sbjct: 382 SAYDRVANFIERAGAAVGEQPSHDEIAAISADALPADFVAAMNDDINVSGAIAAIFTAIR 441

Query: 368 -----LHKLARESTKNHDLLPIFNASAHI------LGIEVCKE--------------HLN 402
                L KLA  +  +     +  A  ++      LG++   E                +
Sbjct: 442 SGNTLLSKLADRADSDAAKAEVREALVNVRAMLDTLGLDPLAEPWVNGGVAGGAAGAAAD 501

Query: 403 KNISIAIEKLVQERLI----LLKMKKFSSADYIRKQLESKGFILED 444
                A++KLV E+L       K K F+ AD IR  L + G  +ED
Sbjct: 502 SAEHAALDKLVSEQLAERAEARKSKDFARADAIRNALNAAGIAIED 547


>gi|296481581|gb|DAA23696.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor [Bos
           taurus]
          Length = 555

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/475 (33%), Positives = 229/475 (48%), Gaps = 74/475 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 44  VKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVFG-- 101

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V  V  ITD+DDKII RA +      ++ + + +     + F +D   L  L PT   
Sbjct: 102 CTVVMVMGITDVDDKIIRRANE------MSVSPASLARLYEEDFKQDMAALKVLPPTAYL 155

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T H+PQ++  I+ +I +GHAY  A   + FD  S  + YG      +    +G   P 
Sbjct: 156 RVTEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGDRYGKLV--GVAPGPVGE--PV 211

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P EP W SPWG GRPGWHIECS ++S   G   DIH GG+DL 
Sbjct: 212 DSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIHSGGVDLA 271

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ     +  +  N ++H+G L+++  G KMSKS  N++TI + L       
Sbjct: 272 FPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYVTIKDFL------- 324

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------- 336
           RS    V RL  L + YR  ID++   L EA  LL                         
Sbjct: 325 RSTSPDVFRLFCLRSSYRSAIDYSEGALLEARSLLRATAAFVEDARAYLRGQLAGGPIQE 384

Query: 337 ---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---PIFNASAH 390
              W +   +K     AV +AL +D +TV A+ A+  L     +        P    S  
Sbjct: 385 DVLWERLGRTKA----AVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPA 440

Query: 391 ILGIEVCK-EHLNKNISI---------------AIEKLVQERLIL-LKMKKFSSA 428
           +LG  V   EH  + + +               A+  LV+E +   LK+++F+ A
Sbjct: 441 VLGAVVASVEHFFETVGVSLAERQCVPGAGSPAALHSLVEELVCFRLKVRQFALA 495


>gi|310286868|ref|YP_003938126.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309250804|gb|ADO52552.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 540

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/524 (31%), Positives = 246/524 (46%), Gaps = 102/524 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +LR  Y  
Sbjct: 25  LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGY-- 82

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++A                     ++F +    L  L PT++P
Sbjct: 83  -QVTFVRNVTDIDDKILDKAAAAGQQWWARAYF------YEREFTQAYDTLGVLPPTYEP 135

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK------- 169
           RAT H+  MI LI+ II +GH Y       +    + FD +S P+YG  + +K       
Sbjct: 136 RATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEAD 195

Query: 170 ---IDEQKMGTRVP----EKYH----------KKNPADFILWKRSTPMEPG---WESPWG 209
                  +MG  V     +KY+          K +P DF LWK   P +P    W +P+G
Sbjct: 196 EAAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFG 255

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A    ++A  W+H+ 
Sbjct: 256 VGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGY--ESAARWMHSA 313

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L E
Sbjct: 314 WVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALVE 366

Query: 330 AE--------------ILLSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKL 371
           A+              + L + P+ +   G+    +    +SA+ +D+N   A  A+   
Sbjct: 367 AQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTA 426

Query: 372 ARES----TKNHDLLPIFNASAHI-------------LGIEVCKE--------------H 400
            R      +K  D      A A +             LG++   E               
Sbjct: 427 IRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESR 486

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  +   I + +  R    K + F+ AD IR  L + G  +ED
Sbjct: 487 EHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED 530


>gi|186471445|ref|YP_001862763.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184197754|gb|ACC75717.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 465

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/467 (35%), Positives = 228/467 (48%), Gaps = 31/467 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           + +Y+T  R +  F +I+     MY CGPTVYD AHIGN R  +  DVL R L+R  Y  
Sbjct: 4   LMLYDTWSRALRPFVSIEAGRAGMYCCGPTVYDHAHIGNLRTYVFEDVLRRALVRNGYQ- 62

Query: 64  KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             + +V NITD+     D      + E  S    ++   I S+ T  FV D   L  L P
Sbjct: 63  --LRHVVNITDVGHLVSDADEGEDKMEKGSRRTGESAWTIASRYTDAFVSDWRALNLLEP 120

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           +   RAT+HI + I  I  +   G+ Y  ++ + FDT    +YG  +R      + G RV
Sbjct: 121 SIWCRATDHIAEQIAFIVELERGGYVYRTDDGLYFDTGKQHSYGYLARLDRAGLQAGKRV 180

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                KKN  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ YLG  FDIH G
Sbjct: 181 ALG-AKKNITDFALWKFSPVDVKRQMEWDSPWGRGFPGWHIECSAMSAKYLGTSFDIHCG 239

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G D I  HH NEIAQ+  A    + AN W+H  FL L   KMSKSNG+FI +  L +   
Sbjct: 240 GEDHIAVHHSNEIAQTEAA-YGTRLANFWLHGRFLTLSAAKMSKSNGDFIRLQTLRD--- 295

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTSKGIIDP 349
              R       R   L  HYR  + FT + L  A+  L       ++W Q +        
Sbjct: 296 ---RHIDPIAYRYLCLTAHYRSNLHFTWESLYAAQAALNRLRHAYARWRQKNALADARFV 352

Query: 350 AVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-EHLNKNISI 407
           A   A  N DLN  +A+  L  L +    +       ++   +LG+ +     L   I  
Sbjct: 353 ARFDAEVNEDLNMPNALAVLWDLVKSDLPDATRRASVDSFDAVLGLGLRDWTPLATEIPE 412

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            I+ L+ ER  +     ++ +D +R  L+ +G+ +ED +   +GQR+
Sbjct: 413 DIQALLDERARVRLEGDWAKSDALRTTLQLRGWQVEDGR---DGQRV 456


>gi|313139572|ref|ZP_07801765.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132082|gb|EFR49699.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 550

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 164/532 (30%), Positives = 247/532 (46%), Gaps = 118/532 (22%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +LR  Y  
Sbjct: 35  LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGY-- 92

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN--------TQQFVKDTTRLA 115
             VT+VRN+TDIDDKI+++A               +  +          ++F +    L 
Sbjct: 93  -QVTFVRNVTDIDDKILDKA--------------AVAGQQWWARAYFYEREFTQAYDTLG 137

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRR 168
            L PT++PRAT H+  MI LI+ II +GH Y       +    + FD +S P+YG  + +
Sbjct: 138 VLPPTYEPRATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQ 197

Query: 169 K----------IDEQKMGTRVP----EKYH----------KKNPADFILWKRSTPMEPG- 203
           K              +MG  V     +KY+          K +P DF LWK   P +P  
Sbjct: 198 KQGAAEADEAAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQD 257

Query: 204 --WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
             W +P+G GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A    ++
Sbjct: 258 ARWSTPFGVGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGY--ES 315

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
           A  W+H+ ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++
Sbjct: 316 AARWMHSAWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLE 368

Query: 322 FTVQRLTEAE--------------ILLSKWPQTSTSKGI----IDPAVLSALYNDLNTVS 363
           ++ Q L EA+              + L + P+ +   G+    +    +SA+ +D+N   
Sbjct: 369 WSDQALVEAQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSG 428

Query: 364 AIQALHKLARES----TKNHDLLPIFNASAHI-------------LGIEVCKEHLNKN-- 404
           A  A+    R      +K  D      A A +             LG++   E       
Sbjct: 429 ATAAIFTAIRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAG 488

Query: 405 ------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                       +   I + +  R    K + F+ AD IR  L + G  +ED
Sbjct: 489 ADGNGESREHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED 540


>gi|213691306|ref|YP_002321892.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213522767|gb|ACJ51514.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457373|dbj|BAJ67994.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 549

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 169/545 (31%), Positives = 250/545 (45%), Gaps = 111/545 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R  L+  Y
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+++A                     ++F +    L  L PT 
Sbjct: 89  ---KVTFVRNVTDIDDKILDKAAA------AGQRWWARAYYYEREFTEAYNTLGVLPPTV 139

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK----I 170
           +PRAT H+  MI LIQ I+ +GH Y       +    + FD +S P+YG  + +K    +
Sbjct: 140 EPRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEV 199

Query: 171 DE-----QKMGTRV----PEKYH----------KKNPADFILWKR---STPMEPGWESPW 208
           DE      +MG  V     +KY+          K +P DF LWK    + P +  W +P+
Sbjct: 200 DEAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPF 259

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+
Sbjct: 260 GVGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHS 317

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L 
Sbjct: 318 AWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALV 370

Query: 329 EAE--------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           EA+              + L   P      + S   +    ++A+ +D+N   A  A+  
Sbjct: 371 EAQAAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFT 430

Query: 371 LAR---------------ESTKNH--DLLPIFNASAHILGIEVCKEHLNKNIS------- 406
             R               E+ K    + L    A    LG++   E              
Sbjct: 431 AIRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGVAGGAADG 490

Query: 407 -------IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                   A+E L+ E+L       K K F  AD IR  L   G  +ED      G + +
Sbjct: 491 TAESPEHAALEALIAEQLNARAEARKAKDFVKADQIRDALTEAGIAIED------GPQGS 544

Query: 456 RWKQK 460
            W  K
Sbjct: 545 TWSLK 549


>gi|312881510|ref|ZP_07741296.1| cysteinyl-tRNA synthetase CysS [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370787|gb|EFP98253.1| cysteinyl-tRNA synthetase CysS [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 457

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 162/462 (35%), Positives = 229/462 (49%), Gaps = 43/462 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T++R+I  F AI    + +Y CGPTVYD+AHIGN R  +  D L R+  +   + 
Sbjct: 6   LNLFDTMKRQIIPFNAIKNGKVSLYACGPTVYDYAHIGNLRTYLFVDTLKRV--FTLNDY 63

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V +V NITD+          +DK+ + AR++      N +   I       F  D  +L
Sbjct: 64  QVNHVMNITDVGHLVSDGDTGEDKMEKGARKQ------NKSAWEIARYFENIFFNDLAKL 117

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P    RAT HI + I  IQ++   G  Y  ++ + FDT  + +YG  +R       
Sbjct: 118 NISRPNITCRATEHIQEQIEFIQSLEEQGFTYLTDDGVYFDTRKLNDYGKLARLDKLGLS 177

Query: 175 MGTRVPEKYHKKNPADFILWK----RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
            G R+ E   KK+P DF LWK    R   ME  W SPWG G PGWHIECSAM+  YLGK 
Sbjct: 178 PGKRI-ELGDKKSPTDFALWKLSGRRQRQME--WPSPWGIGFPGWHIECSAMAEKYLGKQ 234

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIH GG D I  HH NEIAQ C A      AN W+H  FL L+  K+SKS G  +T+N 
Sbjct: 235 FDIHIGGEDHIPVHHTNEIAQ-CEAKNGHIQANYWLHGYFLQLDNEKISKS-GVSLTLNT 292

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKGI 346
           L+E      + +     R   L +HYR  ++FT Q L  A+     L++K  Q+    G 
Sbjct: 293 LIE------KGFDPLDYRYLTLTSHYRSHLNFTWQGLAGAQKARRRLMTKL-QSLPKGGK 345

Query: 347 IDPAVLSALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           IDP+  S        D N   A+  +  +        D          + G+++ +E + 
Sbjct: 346 IDPSYQSQFVGFINQDFNMPRALALVWAILDSHLNGADKRATLVYFDQVFGLDMERE-VK 404

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             I + IEKL Q+R  L +   +  AD IR +LE  G+ + D
Sbjct: 405 LIIPVEIEKLAQQRHQLKQQGNYQDADQIRAELEKLGYQIND 446


>gi|87200394|ref|YP_497651.1| cysteinyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|109894915|sp|Q2G5Q6|SYC_NOVAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|87136075|gb|ABD26817.1| cysteinyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 493

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 160/485 (32%), Positives = 241/485 (49%), Gaps = 62/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L R++  FQ +     R+Y CGPTVY++ HIGN R  +  D+L R L +  G K
Sbjct: 15  LRLFNSLTRQLEAFQPVHAGEARVYSCGPTVYNYPHIGNMRAYVFADLLGRTLSFK-GLK 73

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            +T+V NITD+          +DK+ + AR E  SI        I    TQ + +D   L
Sbjct: 74  -LTHVINITDVGHLTDDADEGEDKMEKMARAEARSI------WDIAKHYTQAYWEDVKAL 126

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT ++PQMI   + I    H YE ++ + FD S++ +YG  +R + +E +
Sbjct: 127 NIRQPARWTIATEYVPQMIAFAERIAAK-HCYELDSGLYFDVSTVADYGRLARAQTEEGE 185

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              R+     K+N ADF +W+++ P E     W+SPWGRG PGWH+ECS MS   LG  F
Sbjct: 186 --GRIEAVEGKRNGADFAIWRKTPPGEKRQMEWDSPWGRGAPGWHLECSVMSGEVLGFPF 243

Query: 232 DIHGGGLDLIFPHHENEIAQS---CCADRIEKTAN----IWIHNGFLNLEGRKMSKSNGN 284
           DIH GG+D    HH NEIAQ+   CC + ++  AN    IW+HN FL     KMSKS+G 
Sbjct: 244 DIHTGGIDHREIHHPNEIAQNQAFCCTNGLDVPANSGARIWMHNNFLVERSGKMSKSSGE 303

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
           F+ +  L++      + +     RL  L  HYR  ++F+ + L  A   L +        
Sbjct: 304 FLRLQLLID------KGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRMLIAVGQL 357

Query: 338 ----PQTSTSKGIIDPAVL----SALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNAS 388
               P+ +   G      L    +A+ +DLNT  A+    + L  +     D L    A 
Sbjct: 358 KERAPEVAAQPGPRFTPFLERFDAAMSDDLNTAVALTVFEEVLGLKKVDPADKLAAVAAM 417

Query: 389 AHILG---IEVCKEHLN---KNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
             +LG   +E+ +  L    K + I    IE L+  R      K F+ +D +R Q+ +KG
Sbjct: 418 DAVLGLGLLELDRRALRIRPKGVEIDEAGIEALLDARKAARAEKDFARSDALRDQIAAKG 477

Query: 440 FILED 444
             + D
Sbjct: 478 VEVMD 482


>gi|39938627|ref|NP_950393.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|61216243|sp|Q6YR75|SYC_ONYPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39721736|dbj|BAD04226.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 438

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 161/466 (34%), Positives = 223/466 (47%), Gaps = 58/466 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L RK   F    P  I MYVCGPTVY+  H+GN RP+I FD + R L       
Sbjct: 2   LKIYNSLTRKKEFFNPAHPPQINMYVCGPTVYNHLHLGNTRPLIFFDTVKRYLEMLNFR- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDKIIE A +    +   D    + +K  + F      L       +P+
Sbjct: 61  -VYYVVNITDIDDKIIENALKN--QVLEQD----LANKYIKSFNNLLKTLNIQTINFKPQ 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI  IQ ++  G AY  +  I F  S I +YG   ++ + + K   R      
Sbjct: 114 ATQYINSMIVYIQTLLDQGFAYFTDQGIYFRVSKIDDYGKLKKQDLSQLKQNARKQLDPQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DFILWK+ T     + SPW  GRPGWH EC+ M         DIHGGG DL FPH
Sbjct: 174 KEFPGDFILWKK-TSQGITYPSPWFAGRPGWHTECATMIEQLFKLPLDIHGGGTDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +K AN ++H   L+ + +KMSKS GN I   +LL       + +  
Sbjct: 233 HENEIAQTH-AHSHQKLANFFMHVERLDYQNQKMSKSLGNIIWCKDLL-------KQYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            +I+L +L THYR+PI+F+   + +A+            + I D    +  Y  +N  S 
Sbjct: 285 CIIKLLILSTHYRKPINFSYDLMEQAQ---------QKYQKITDFLTKNNFYLKVNQFSC 335

Query: 365 -------IQALHKLARESTKNHDLLPIFNAS---AHILGI-----------------EVC 397
                  +Q  H+L ++    H ++ +   +   AH   I                    
Sbjct: 336 QALDQDIMQLFHQLMQDDLATHKVIDLMEQTIKQAHQTQILDKLSQFQNSLLLILNILGI 395

Query: 398 KEHLNKNISIAIEK--LVQERLILLKMKKFSSADYIRKQLESKGFI 441
               NK     ++   L Q+     K + F+ AD +RKQL  KGFI
Sbjct: 396 TIPFNKPTKTDLQTYFLWQDAR---KYRDFAQADILRKQLLDKGFI 438


>gi|262165957|ref|ZP_06033694.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025673|gb|EEY44341.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 372

 Score =  231 bits (589), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/386 (35%), Positives = 201/386 (52%), Gaps = 38/386 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTS 157
           +T +  Q+   D   L    P  +PRAT +I ++I L+Q +I  G AY A+N +++F+  
Sbjct: 1   MTERLIQEMYADFDALNIKRPDVEPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVG 60

Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHI 217
               YG  S++ +++ + G RV  +  K++P DF+LWK S P EP WESPWG GRPGWHI
Sbjct: 61  KYDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHI 120

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           ECSAM+S  LG  FDIHGGG DL FPHHENEIAQSCCA   +   N W+H+G + ++  K
Sbjct: 121 ECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKEK 179

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GNF TI ++L         + A  +R  ++  HYR  ++++ + L +A   L + 
Sbjct: 180 MSKSLGNFFTIRDVL-------GHYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERL 232

Query: 338 PQTSTSKGIIDPAV---------LSALYNDLNTVSAIQALHKLARE--STKNHDLL---- 382
                      PA           +A+ +D NT  A   L  +ARE    K+ DL     
Sbjct: 233 YNALRGLDRSVPAAGGEEYLSRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASA 292

Query: 383 --PIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
              +    A ++GI         +       +  IE L++ R      K +++AD  R +
Sbjct: 293 LGSLMRELADVIGILYQEPETFFQGSAEDEEAEQIEALIKLRNDSRAAKDWANADMARDK 352

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L   G +LED      G   T W++K
Sbjct: 353 LNEMGIVLED------GPNGTTWRRK 372


>gi|212716741|ref|ZP_03324869.1| hypothetical protein BIFCAT_01678 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660445|gb|EEB21020.1| hypothetical protein BIFCAT_01678 [Bifidobacterium catenulatum DSM
           16992]
          Length = 556

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 170/525 (32%), Positives = 247/525 (47%), Gaps = 102/525 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T    ++ F  I P  + MYVCG TV    HIG+ R  + FDV+ R      G K
Sbjct: 39  LKLYDTASHAVSNFTPIKPGQVGMYVCGATVQSSPHIGHIRAAVTFDVVRRWFERL-GYK 97

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKI+++A            I        ++F +    L    PT++PR
Sbjct: 98  -VTFVRNVTDIDDKILDKAAAAGQQWWERAYIY------EREFTEAYNTLGVEPPTYEPR 150

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRKIDE----- 172
           AT H+  MI LI+ II +GH Y   +E       + FD +S P+YG  + +K        
Sbjct: 151 ATGHMIDMIDLIKQIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVADAA 210

Query: 173 ----QKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGRG 211
                 MG  V     +KY+          K +P DF LWK    S P++  W +P+G G
Sbjct: 211 SEVADAMGPSVDNAGNDKYNPVDPADMSEDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGY--DSAARWMHSAWV 328

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L EA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAENS----AW---VVRYALGSVQYRSMLEWSDQTLPEAQ 381

Query: 332 ILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQA------ 367
               +                      S S   +    ++A+ +D+N   A  A      
Sbjct: 382 SAYDRVSNFIERAGAAVGGQPPREEIVSISADALPADFVAAMNDDINVSGASAAIFTAIR 441

Query: 368 -----LHKLA----RESTKNHDLLPIFNASAHI--LGIEVCKEHLNKNIS---------- 406
                L KLA     +  K+     + N  A +  LG++   E      +          
Sbjct: 442 SGNTLLSKLADRVDSDVAKDEVRAVLVNVRAMLDTLGLDPLAEPWVSEGAAGGAGSGADS 501

Query: 407 ---IAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILED 444
               A+++LV    +ER    K K F+ AD IR  L + G  +ED
Sbjct: 502 AEHTALDRLVSEQLEERAEARKAKDFARADAIRDALGAAGITIED 546


>gi|291528005|emb|CBK93591.1| cysteinyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 475

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 211/421 (50%), Gaps = 42/421 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL R+I          I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V  V NITD+          +DK+++ A++EH S+        +  + T  F KD
Sbjct: 61  GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSV------MEVAKEYTDAFFKD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
            T +    P     ATN IP+ I++++ +I  G+AY A   + FDTS + +Y  FS    
Sbjct: 113 FTAVHNRMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVE 172

Query: 171 DEQ-KMGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
            EQ ++G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S 
Sbjct: 173 KEQLQVGVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISM 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +LG+  DIH GG+D IFPHH NEIAQS            W H   LN    KMSKS G 
Sbjct: 233 KHLGEYVDIHCGGVDNIFPHHTNEIAQSESY-LGHDWCKYWFHVNHLNDRAGKMSKSKGA 291

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
            +T++ L E      + +     R   L +HYR+P++F+   L  A    +K  +     
Sbjct: 292 ILTVSVLQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAEL 345

Query: 343 -SKGIIDPAVLS--------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
             +G ID    +        A+ NDLNT  AI  ++ + +    +   L + +    +L 
Sbjct: 346 KDEGDIDETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLD 405

Query: 394 I 394
           +
Sbjct: 406 L 406


>gi|238923819|ref|YP_002937335.1| cysteinyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238875494|gb|ACR75201.1| cysteinyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 475

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 211/421 (50%), Gaps = 42/421 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL R+I          I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V  V NITD+          +DK+++ A++EH S+        +  + T  F KD
Sbjct: 61  GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSV------MEVAKEYTDAFFKD 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
            T +    P     ATN IP+ I++++ +I  G+AY A   + FDTS + +Y  FS    
Sbjct: 113 FTAVHNRMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVE 172

Query: 171 DEQ-KMGTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
            EQ ++G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S 
Sbjct: 173 KEQLQVGVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISM 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +LG+  DIH GG+D IFPHH NEIAQS            W H   LN    KMSKS G 
Sbjct: 233 KHLGEYVDIHCGGVDNIFPHHTNEIAQSESY-LGHDWCKYWFHVNHLNDRAGKMSKSKGA 291

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
            +T++ L E      + +     R   L +HYR+P++F+   L  A    +K  +     
Sbjct: 292 ILTVSVLQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAEL 345

Query: 343 -SKGIIDPAVLS--------ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
             +G ID    +        A+ NDLNT  AI  ++ + +    +   L + +    +L 
Sbjct: 346 KDEGDIDETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLD 405

Query: 394 I 394
           +
Sbjct: 406 L 406


>gi|257459527|ref|ZP_05624636.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442952|gb|EEV18086.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 476

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 156/473 (32%), Positives = 231/473 (48%), Gaps = 64/473 (13%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY++L +K   F+ I    +R+Y CGPTVYD AH+G+A+  + FD+L R+L+    E  V
Sbjct: 3   IYDSLSKKKLPFKPISDGLVRIYACGPTVYDDAHLGHAKSAVSFDLLRRVLQAEGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            + RN TDIDDKI+++  Q   S      +  IT   T+++++D + L     +  P+AT
Sbjct: 61  KFARNFTDIDDKILKKMEQSGKS------LEEITEFYTRRYLQDMSALNVADASISPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +I  +  LI +++  G AYE A + I FDT    +Y S S +K    K   RV     K
Sbjct: 115 ENIAAICELISSLLQKGFAYEIAGDGIYFDTRKDGDYLSLSGKKEGAGKNIARVASNDAK 174

Query: 186 KNPADFILWKRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGGLD 239
            +  DF+LWK     +  W +SP+G+GRPGWH EC AM   +L         DIH GG D
Sbjct: 175 HDEKDFVLWK----FDENWFDSPFGKGRPGWHSECVAMILAHLDSGDPQFCIDIHAGGAD 230

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ  CA R    +  W+HNGF+ +   KMSKS GN   + + L+      
Sbjct: 231 LLFPHHENEAAQCRCA-RHRALSKYWLHNGFVQVNNEKMSKSLGNSFFVGDALKIA---- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------WPQ 339
              P   +R  +L +HYR   +++V  L  ++  L K                     P+
Sbjct: 286 ---PGEALRFYLLSSHYRANFNYSVTDLLASKKRLDKIYRLKKRVRDILTPVAGQNSAPK 342

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-----------S 388
              ++      ++  L +DLNT  A+  L      + +  D  P   A           +
Sbjct: 343 LPAAEVKFRSEMMEFLSDDLNTSGALAVLDSFVASANEALDRAPKDKALKARIAANLEFA 402

Query: 389 AHILGI--EVCKEHLNKNIS----IAIEKLVQERLILLKMKKFSSADYIRKQL 435
              LGI  E   E+    +S      IE+L+++R      K F+SAD IR +L
Sbjct: 403 KQTLGILYEDETEYFRFGVSEQQRAQIEELIKQRAQAKAEKDFASADAIRARL 455


>gi|171741395|ref|ZP_02917202.1| hypothetical protein BIFDEN_00478 [Bifidobacterium dentium ATCC
           27678]
 gi|283455255|ref|YP_003359819.1| cysteinyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171277009|gb|EDT44670.1| hypothetical protein BIFDEN_00478 [Bifidobacterium dentium ATCC
           27678]
 gi|283101889|gb|ADB08995.1| cysS Cysteinyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 547

 Score =  231 bits (588), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 170/527 (32%), Positives = 251/527 (47%), Gaps = 103/527 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+Y+T    ++ F  + P  + +YVCG TV    HIG+ R  + FDV+ R  +   G 
Sbjct: 28  ELKLYDTASHTVSSFVPLRPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFQRL-GY 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K VT+VRN+TDIDDKI+++A            I        ++F +    L    PT++P
Sbjct: 87  K-VTFVRNVTDIDDKILDKAAAAGQQWWERAYIY------EREFTEAYDTLGVEPPTYEP 139

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRK-----ID 171
           RAT H+  MI LI+ II +GH Y   +E       + FD +S P+YG  + +K      D
Sbjct: 140 RATGHMIDMIDLIRKIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVSDD 199

Query: 172 EQK----MGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGR 210
             K    MG  V     +KY+          K +P DF LWK    S P++  W +P+G 
Sbjct: 200 ASKITDAMGPSVDNAGDDKYNPIDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGT 259

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ +
Sbjct: 260 GRPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGY--DSAARWMHSAW 317

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +  +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L EA
Sbjct: 318 VTAKGEKMSKSLGNGLSVPAVLAENS----AW---VVRYALGSVQYRSMLEWSDQTLAEA 370

Query: 331 E--------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQA----- 367
           +                + + P      + S   +    ++A+ +D+N   A  A     
Sbjct: 371 QSAYDRVANFIERAGAAVGEQPSHDEIAAISADALPADFVAAMNDDINVSGATAAIFTAI 430

Query: 368 ------LHKLARESTKN------HDLLPIFNASAHILGIEVCKE--------------HL 401
                 L KLA  +  +       + L    A    LG++   E                
Sbjct: 431 RSGNTLLSKLADRADSDAAKAEVREALVNVRAMLDTLGLDPLAEPWVNGGVAGGAAGAAA 490

Query: 402 NKNISIAIEKLVQERLI----LLKMKKFSSADYIRKQLESKGFILED 444
           +     A++KLV E+L       K K F+ AD IR  L + G  +ED
Sbjct: 491 DSAEHAALDKLVSEQLAERAEARKSKDFARADAIRNALNAAGIAIED 537


>gi|197294544|ref|YP_001799085.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853871|emb|CAM11833.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 439

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 234/459 (50%), Gaps = 43/459 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  +  +F  + P ++ MYVCGPTVY+  H+GNARP+I F+ + + L    G K
Sbjct: 2   LKIYNSLTNQKEDFIPLSPPDVNMYVCGPTVYNHLHLGNARPLIFFNTVKKYLETI-GFK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDKII+ + Q+           ++  +    F++    L        P+
Sbjct: 61  -VFYVVNITDIDDKIIKSSLQKQTKE------EVLAKEYISSFLQLLKDLNIETINSHPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           ATN+IP MI  I+ ++  G AY  +  I F+ S I +YG    + + + K   R     +
Sbjct: 114 ATNYIPSMIEYIKVLLDKGFAYFTDQGIYFEISKISDYGQLKNQDLTQLKKNARKTLDPN 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK+ T     ++SPW  GRPGWH EC  M         DIHGGG DL FPH
Sbjct: 174 KKKPGDFVLWKK-TSQGVQYQSPWFCGRPGWHTECVTMIEQIFKTSLDIHGGGADLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NEIAQ+  A +    AN ++H   L+ E +KMSKS GN +   +LL       + + +
Sbjct: 233 HQNEIAQA-KAYKNNNLANFFMHVARLDFENQKMSKSLGNIVWCKDLL-------KRFSS 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSKWPQTSTSKGIID--PAVLS 353
            VI+  +L THYR+PI+F+   + +++         ++ + +      K I+D  P ++ 
Sbjct: 285 SVIKFFILSTHYRKPINFSENLIKQSQKKYDKIMLFLIKNDFYLQIKKKPIVDLEPKIID 344

Query: 354 ALY----NDLNTVSAIQALH---KLARESTKNHDLLPIFNAS----AHILGIEVCKEHLN 402
           + +    +D +T   I  +    K A +  ++ D L   + S      +LGIE       
Sbjct: 345 SFHRLMKDDFSTNKVIDLIEINIKEAYQKQQDLDFLAKIHKSLLWILDVLGIEPQFFRAE 404

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K       K  + R    + K F  AD++RK+L  K  +
Sbjct: 405 KKDFETYVKWQEAR----QNKDFKQADFLRKELIDKNLL 439


>gi|163785696|ref|ZP_02180221.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879035|gb|EDP73014.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 382

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/319 (38%), Positives = 173/319 (54%), Gaps = 38/319 (11%)

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KII RA++E   +P     ++I+ +  + + +D           +PR T HIP +I LIQ
Sbjct: 1   KIINRAKKE--CLPF----TVISDRYIKSYFEDAENFKIEPADVEPRVTTHIPDIIDLIQ 54

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            +I  G+AYE   ++ F      +YG  S+R +DE   G RV     KK+P DF LWK S
Sbjct: 55  KLIEKGYAYEVEGDVYFSVRKFKDYGKLSKRSVDELIAGARVEPGEKKKDPLDFALWKAS 114

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
              EP W+SPWG+GRPGWH EC+AM   +LG+  DIHGGGLDL FPHHENE+AQ+     
Sbjct: 115 KAGEPAWDSPWGKGRPGWHTECTAMIFKHLGQTIDIHGGGLDLTFPHHENELAQAEALSE 174

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            +  A  WIHNG + + G+KMSKS GN+IT+ E+ +        +   ++RL +L  HYR
Sbjct: 175 -KPFAKYWIHNGLVTVNGQKMSKSLGNYITLKEIYQ-------KYHPDILRLLVLSVHYR 226

Query: 318 EPIDFTVQRLTEAEI-------------LLSKWPQT---------STSKGIIDPAVLSAL 355
            P+DF+  ++ E +              +L K P+           T+K   D     A+
Sbjct: 227 SPLDFSWDKMEEMKKAYERLKNAIDEYEILEKLPENPDFEEDLYGKTAKAQQD--FYRAM 284

Query: 356 YNDLNTVSAIQALHKLARE 374
            ND NT  A  AL+ L RE
Sbjct: 285 SNDFNTPEAFAALYGLVRE 303


>gi|239622493|ref|ZP_04665524.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239514490|gb|EEQ54357.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 536

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 170/546 (31%), Positives = 253/546 (46%), Gaps = 112/546 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R  L+  Y
Sbjct: 15  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 74

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+++A                     ++F +    L  L PT 
Sbjct: 75  K---VTFVRNVTDIDDKILDKAAA------AGQRWWARAYYYEREFTEAYNTLGVLPPTV 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK----I 170
           +PRAT H+  MI LIQ I+ +GH Y       +    + FD +S P+YG  + +K    +
Sbjct: 126 EPRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEV 185

Query: 171 DE-----QKMGTRV----PEKYH----------KKNPADFILWKR---STPMEPGWESPW 208
           DE      +MG  V     +KY+          K +P DF LWK    + P +  W +P+
Sbjct: 186 DEAAAVADRMGPSVDATGADKYNPVDPADVSPDKHDPRDFALWKAPKDTDPEDARWSTPF 245

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+
Sbjct: 246 GVGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHS 303

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L 
Sbjct: 304 AWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALV 356

Query: 329 EAEILLSKWP----QTSTSKGIIDP------AV---------LSALYNDLNTVSAIQALH 369
           EA+    +      +   + G + P      AV         ++A+ +D+N   A  A+ 
Sbjct: 357 EAQAAYDRVSNFIERAGVALGDLKPNRDEITAVPADDLPADFVAAMNDDVNVSGATAAIF 416

Query: 370 KLAR---------------ESTKNH--DLLPIFNASAHILGIEVCKEHLNKNIS------ 406
              R               E+ K    + L    A    LG++   E             
Sbjct: 417 TAIRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGVAGGAAD 476

Query: 407 --------IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                    A+E L+ E+L       K K F+ AD IR  L   G  +ED      G + 
Sbjct: 477 GTAESPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQG 530

Query: 455 TRWKQK 460
           + W  K
Sbjct: 531 STWSLK 536


>gi|209877248|ref|XP_002140066.1| cysteinyl-tRNA synthetase [Cryptosporidium muris RN66]
 gi|209555672|gb|EEA05717.1| cysteinyl-tRNA synthetase, putative [Cryptosporidium muris RN66]
          Length = 591

 Score =  230 bits (587), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/338 (39%), Positives = 191/338 (56%), Gaps = 23/338 (6%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           N+L    TEF  ++   I  Y CGPTVYD AH+G+AR  + FD++ R+L  Y+G   V  
Sbjct: 44  NSLTAGKTEFIPVNGKRINWYACGPTVYDSAHLGHARTYVTFDIVRRILEDYFGYD-VYM 102

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V NITDIDDKII+R+ ++       D    +  +  ++F  D   L    P    R +  
Sbjct: 103 VMNITDIDDKIIKRSIEQK-----RDNFLDLAREYEKEFFDDMHALNVKPPDIITRVSEF 157

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKI-DEQKM----GTR 178
           IP+++  I  II  G AYE +  + FD ++  +     YG    + + DE K+    G  
Sbjct: 158 IPEILDYISTIIYRGFAYECDGSVYFDINAFRSKEGHFYGRMEPKSVADESKVLEGEGDL 217

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
                 KK+P DF LWK++ P EP W+SPWG+GRPGWHIECSAM+S+ LG   DIH GG+
Sbjct: 218 GEHSKDKKSPLDFALWKKAKPGEPFWDSPWGKGRPGWHIECSAMASNTLGFPIDIHSGGI 277

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHH+NE+AQS       +  N ++H+G L++ G KMSKS  NF TI ++L  K++ 
Sbjct: 278 DLRFPHHDNELAQSEAHYDQPQWVNYFLHSGHLHIHGAKMSKSLKNFTTIRDVL--KEYS 335

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
            R      IR+  L+  +  PI+F+ +   +  + + K
Sbjct: 336 PRH-----IRMLFLLHKWDGPINFSPETSLKEAVAVDK 368


>gi|109947774|ref|YP_665002.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123362573|sp|Q17WH3|SYC_HELAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109714995|emb|CAK00003.1| cysS [Helicobacter acinonychis str. Sheeba]
          Length = 465

 Score =  230 bits (586), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 158/463 (34%), Positives = 237/463 (51%), Gaps = 54/463 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ + P    +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLAPKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 VDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIID----P 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   S G ID     
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGSLGNIDLNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L  + +DLN   A+  L  +     +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFVEELLGIGFKN 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
             E  +  + ++    IEK ++ER    + K F  AD IR++L
Sbjct: 403 PTEYFQLGVKESEKQEIEKKIEERKRAKEQKDFIKADSIREEL 445


>gi|210135076|ref|YP_002301515.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226710843|sp|B6JMA7|SYC_HELP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|210133044|gb|ACJ08035.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 465

 Score =  230 bits (586), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 153/461 (33%), Positives = 233/461 (50%), Gaps = 50/461 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKSKQKVPFEPLVQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K
Sbjct: 115 EYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMH--NSSVEFSRIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI V    
Sbjct: 345 LECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGVKDPS 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQL 435
               + ++      IE  ++ER    + K F  AD IR++L
Sbjct: 405 AYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREEL 445


>gi|157165603|ref|YP_001466909.1| cysteinyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166200138|sp|A7ZDQ1|SYC_CAMC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|112800284|gb|EAT97628.1| cysteinyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 464

 Score =  229 bits (585), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 151/464 (32%), Positives = 232/464 (50%), Gaps = 54/464 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T +R+  EF  I    + +Y+CGPTVYD AH+G+A+  + FD+L R+L+      
Sbjct: 1   MRIFDTSKREKVEFSPIKDGEVSIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLK---ALG 57

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V + RN TDIDDKI+ +  Q   S+        IT+K    +  D   L  L P  +P
Sbjct: 58  CKVKFARNYTDIDDKILNKMAQTGQSLE------EITNKYIAHYESDMGALNVLDPDFKP 111

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT  +  +I  I+ ++  G AY+ ++ I FDTS    Y S S  K +   +  RV    
Sbjct: 112 KATQCLEAIISYIKVLMDRGVAYKTSDGIYFDTSKDSGYFSIS-GKDNNTDLIARVASFG 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK------VFDIHGGG 237
            K++  DF+LWK     E  +ESP+G+GRPGWH EC AM   +L          DIH GG
Sbjct: 171 EKRDEKDFVLWKFD---EKWYESPFGKGRPGWHTECVAMIREFLSDKENDKFEIDIHAGG 227

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL+FPHHENE +Q  CA   +  +  W+HNGF+ +   KMSKS  N   + + L     
Sbjct: 228 IDLLFPHHENEASQCRCAYH-KNLSKYWMHNGFIKVNNEKMSKSLNNSFFVKDAL----- 281

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIID 348
             ++    V+R  +L +HYR   +++ + L  ++  L K           Q   +     
Sbjct: 282 --KNVHGEVLRYYLLTSHYRAHFNYSDEDLVASKKRLDKIYRLKKRVDGVQAGMANESFK 339

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-----------AHILGIEVC 397
             +L AL +DLN   A+ ++ +  + + +  D  P   A              ILGI + 
Sbjct: 340 SELLEALSDDLNASKALASVDEFVKTANERLDNNPKDKAYKAEVVANLELIGEILGIAIT 399

Query: 398 K--EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQL 435
              E+    +S      I+KL+ ER +  K + F+ AD IR +L
Sbjct: 400 NYVEYFQFGVSDEQKEHIQKLLDERAVAKKERNFARADEIRDEL 443


>gi|124002858|ref|ZP_01687710.1| cysteinyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123992086|gb|EAY31473.1| cysteinyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 568

 Score =  229 bits (585), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 129/293 (44%), Positives = 173/293 (59%), Gaps = 24/293 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL      F+ ++P  + MYVCGPTVY+  HIGNARP + FDVL R L Y  G K
Sbjct: 14  LKIQNTLTNTKEVFEPLNPPFVGMYVCGPTVYNNPHIGNARPAVFFDVLSRYLTYL-GYK 72

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V YVRNITD+          +D+I ++A+ E   +   + ++I T+K    +++    L
Sbjct: 73  -VRYVRNITDVGHLTGSENDGEDRISKQAKLEQ--LEPMEIVNIYTNK----YLELMDAL 125

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKID 171
               P+  P AT HI + I  +Q I+  G AYE+   + FD        NYG  S R ID
Sbjct: 126 NVKRPSISPTATGHIVEQIDTVQKILDAGLAYESEGSVYFDVKKYNERHNYGELSGRVID 185

Query: 172 EQKMGTR--VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
           E    TR  +  +  KKNP DF +WK+++P     W SPWG G PGWH+ECS MS+ YLG
Sbjct: 186 ELLANTRENLEGQSEKKNPMDFAIWKKASPEHLMRWNSPWGEGFPGWHLECSVMSTKYLG 245

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           + FDIHGGG+DL+FPHHE EIAQ+  A+  +     W+HN  L ++G KMSKS
Sbjct: 246 EQFDIHGGGMDLMFPHHECEIAQAKAANGGKAPVKYWMHNNMLTIDGVKMSKS 298



 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 50/205 (24%)

Query: 284 NFITINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----------- 331
           NFITI E+   + +   +++    IRL +L  HYR  IDF+ + L +A+           
Sbjct: 363 NFITIEEVFTGEHEILAQAYSPMTIRLFILQAHYRSTIDFSNKALLDAQKAYKKLMNSLR 422

Query: 332 -ILLSKWPQTSTS---------KGIIDPAVLSALYNDLNTVSAIQALHKLARE----STK 377
            + L ++P  + +          G  D A L ++ +D+NT  A+  +  + ++     T 
Sbjct: 423 VLKLMEYPTAAGTLNTKLDQQINGFCDNA-LRSMNDDMNTAKALAQIFNINKKINHFYTH 481

Query: 378 NHDLLPIFNAS------------AHILGIEVCKEHLNKNISIAIEKLVQERLILLK---- 421
             D+  I  A+              + G+   +E  NK      E L+Q  L L K    
Sbjct: 482 PQDIATIEKATFDRMKSFFITFIVDVFGL--IEEKTNKQ-----EVLIQGMLDLYKDAKE 534

Query: 422 MKKFSSADYIRKQLESKGFILEDYK 446
            K +   D IR   +  G +++D K
Sbjct: 535 NKDYDKVDQIRTTFKESGLLIKDLK 559


>gi|222823636|ref|YP_002575210.1| cysteinyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254781231|sp|B9KFX4|SYC_CAMLR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222538858|gb|ACM63959.1| cysteinyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 460

 Score =  229 bits (584), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 137/383 (35%), Positives = 202/383 (52%), Gaps = 34/383 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            ++++ +K  EF   +     +Y+CGPTVYD AH+G+AR  + FD L R+L     E  V
Sbjct: 3   FFDSVLKKKCEFIPHEAKKANIYLCGPTVYDDAHLGHARSSVCFDFLRRVLLASGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            + RN TDIDDKI+++ ++   S+        IT+   +++ +D   L  L P  +P+AT
Sbjct: 61  VFARNYTDIDDKILKKMQESGKSLKE------ITNFYIKRYEEDMQALNILEPDFKPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I QMI  I+ ++    AY+  + I FDTS    Y   S+R +++ +  +R+ E   KK
Sbjct: 115 AYIEQMITYIEKLLELNLAYKLEDGIYFDTSKDDKYFYISKRNLEDNQ--SRLEESVAKK 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           N +DF+LWK      P   + +G+GRPGWH EC  M         DIH GG+DL+FPHHE
Sbjct: 173 NDSDFVLWKFDEKFYP---ASFGKGRPGWHTECVVMIESIFKDKLDIHAGGIDLLFPHHE 229

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NE  Q  C +  E  AN W+HNGF+ + G KMSKS GN   + + L  K F G      V
Sbjct: 230 NEACQCRCKNNHE-LANFWLHNGFVQINGEKMSKSLGNSFFLKDSL--KLFNGE-----V 281

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAV----LS 353
           +R  +L  HYR   ++ ++ L  A+  L K+ +             K II+  V    L 
Sbjct: 282 LRFYLLSVHYRAHFNYALEDLQAAKKRLDKFYRLKKRLNLNAFIDEKTIIESKVSQNILD 341

Query: 354 ALYNDLNTVSAIQALHKLAREST 376
            L +DLN   A+  L +   ES 
Sbjct: 342 VLNDDLNASKALALLDEFINESN 364


>gi|261211911|ref|ZP_05926198.1| cysteinyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839261|gb|EEX65893.1| cysteinyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 364

 Score =  229 bits (584), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/366 (36%), Positives = 194/366 (53%), Gaps = 38/366 (10%)

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           P  +PRAT +I ++I L++ +I  G AY A+N +++F+      YG  S++ +D+ + G 
Sbjct: 13  PDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLDQLQAGA 72

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           RV  +  K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG
Sbjct: 73  RVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGG 132

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L     
Sbjct: 133 SDLQFPHHENEIAQSCCAHGTQYV-NTWMHSGMVMVDKEKMSKSLGNFFTIRDVL----- 186

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------ 351
               + A  +R  ++  HYR  ++++ + L +A   L +            PA       
Sbjct: 187 --GHYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYL 244

Query: 352 ---LSALYNDLNTVSAIQALHKLARE--STKNHDLL------PIFNASAHILGI------ 394
               +A+ +D NT  A   L  +ARE    K+ DL        +    A ++GI      
Sbjct: 245 SRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILHQEPE 304

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
              +       +  IE L++ R      K +++AD  R +L   G +LED      G   
Sbjct: 305 SFFQGSAEDEDAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPNG 358

Query: 455 TRWKQK 460
           T W++K
Sbjct: 359 TTWRRK 364


>gi|15790190|ref|NP_280014.1| hypothetical protein VNG1097G [Halobacterium sp. NRC-1]
 gi|169235919|ref|YP_001689119.1| cysteine--tRNA ligase [Halobacterium salinarum R1]
 gi|21264026|sp|Q9HQL9|SYC_HALSA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|10580644|gb|AAG19494.1| cysteinyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726985|emb|CAP13771.1| cysteine--tRNA ligase [Halobacterium salinarum R1]
          Length = 494

 Score =  229 bits (584), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 155/508 (30%), Positives = 242/508 (47%), Gaps = 76/508 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGEKC 65
           + NT   +   F+  DP N+ +Y CG TV D AH+G+AR  +  DV+ R L +  YG   
Sbjct: 5   VSNTRSGEQEAFEPDDPENVLVYTCGLTVSDDAHLGHARLWVQSDVMTRWLSHAGYG--- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V+N+TD+++KI+ R   +     + D  + + +  TQ  + D   L        PR 
Sbjct: 62  VRHVQNVTDVNEKIVARVGAD----GLGDTEAAVAAHYTQSVIDDMRALNLARADVYPRV 117

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           + H+P++I LI +++  G+AYEA   + FD      YG+ S +++DE        E+  K
Sbjct: 118 SEHVPEIIDLIGDLVDAGYAYEAGGSVYFDVRRFEEYGALSGQQVDELDPQGPDAEQAEK 177

Query: 186 KNPADFILWK------------RSTPMEP-------GWESPWGRGRPGWHIECSAMSSHY 226
           ++PADF LWK            R   + P        W SPWG GRPGWHIECSAM+  +
Sbjct: 178 RHPADFALWKAGGVSPDDANTHRDDELPPLDGERGQTWASPWGEGRPGWHIECSAMAMTH 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L    DIH GG DL+FPHHENEIAQS  A   E+ A+ W+H   L  +G KMS S GNF 
Sbjct: 238 LDDHIDIHVGGQDLVFPHHENEIAQSEAASG-ERFADHWLHVRLLETDGEKMSSSLGNFF 296

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE---------------AE 331
           T++  +  +          V+R+ ++ T Y +   ++   ++E               A+
Sbjct: 297 TVSNAVAERG-------PNVVRMLLVSTSYTQRQTYSEATVSEATQRWERLQRAHERAAD 349

Query: 332 ILLSKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAIQALHKLARESTKN------ 378
            + S       +   +  AV        +A+  D NT +A+ AL +LA    ++      
Sbjct: 350 AIDSVAAHAKPADDALRTAVADARGEFAAAMRADFNTRAAVSALLELASAVNRHVDGTDT 409

Query: 379 ------HDLLPIFNA-SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSA 428
                 HD +  F      +LG++         +S+A   I+ ++  R        +  A
Sbjct: 410 YDYQGLHDAVDAFETLGGDVLGLQFDDGAGEDAVSLADDVIDLVLDVREQERTAGNYERA 469

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTR 456
           D +R +LE+ G  +ED    D+G  + R
Sbjct: 470 DDLRDRLEALGVSVED---TDDGATVRR 494


>gi|302834082|ref|XP_002948604.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
           nagariensis]
 gi|300266291|gb|EFJ50479.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
           nagariensis]
          Length = 509

 Score =  229 bits (583), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 170/507 (33%), Positives = 248/507 (48%), Gaps = 92/507 (18%)

Query: 1   MKKKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           ++ ++  +NT+ +    F+  +    + MYVCG TVYD++HIG+AR  + FDVLYR L  
Sbjct: 16  LRGRVAFFNTMSKSKELFRPRLADGRVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLTA 75

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             G   V YVRN TDIDDKII RA+Q           S +T +  ++F +D   L  L P
Sbjct: 76  ACGYD-VQYVRNFTDIDDKIIARAQQSGVD------PSELTERFIREFNQDMAALNVLTP 128

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           T +PRAT  +PQMI  I  I+ HGHAY     ++ FD +S+  YG  S R +++ + G R
Sbjct: 129 TLEPRATAFVPQMISTITAIMQHGHAYAVEGGDVFFDVTSLEGYGRLSGRALEDNRAGER 188

Query: 179 VPEKYHKKNPADFIL-------WKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYL 227
           V     K++PADF L         R  P    +  GW   W R        C   +S +L
Sbjct: 189 VAVDGRKRSPADFALILVCLGGTGRDGPPGIVIFGGWGFSWFR--------CFRAASGFL 240

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCA----DRIEKTANI---WIHNGFLNLEGRKMSK 280
              +     G DL+FPHHENE+AQS  A    D++    +    W+HNGF+N++  KMSK
Sbjct: 241 VG-WPQFLRGRDLVFPHHENELAQSQAACGYPDQLHNGTDFVRYWLHNGFVNVDSEKMSK 299

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S GNF TI ++L        S+    +R  +L   YR P++++ + L EA    S+    
Sbjct: 300 SLGNFFTIRDVLS-------SYHPLALRWFLLAAQYRAPLNYSDKGLEEAS---SRLYYV 349

Query: 341 STSKGIIDPA-----------------VLSALYNDLNTVSAIQALHKLAR---------E 374
             ++  ++PA                 VLSAL +DLNT +A+ AL    R          
Sbjct: 350 IQARADVEPAATSSSSSTSSGAVLVSEVLSALADDLNTPAAVGALSGPLRTINDLMTTKA 409

Query: 375 STKNHDLLPIFNASAHI--------LGIEVCK--------EHLNKNISIAIEKLVQERLI 418
             K  D L +  A  H+        LG+E           E   +  +  +E+L+Q  LI
Sbjct: 410 GRKRPDRLAVL-AQLHVAMGVVMELLGMEPNSGTKQQPQLEGSLEGAAAGLEQLLQ--LI 466

Query: 419 LLKMKK-FSSADYIRKQLESKGFILED 444
             +  K F+ +D IR +L S+G +L D
Sbjct: 467 QARQAKDFARSDAIRLELASRGILLLD 493


>gi|317011097|gb|ADU84844.1| cysteinyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 465

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 156/461 (33%), Positives = 233/461 (50%), Gaps = 50/461 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K
Sbjct: 115 EYLDAMVRMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG+D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGVD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCTFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIID----PAV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   S G ID      +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGSLGNIDLNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI------ 394
           L  + +DLN   A+  L  +     +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFVEELLGIGFKNPT 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           E  +  +N++    IEK ++ER    + K F  AD IR++L
Sbjct: 405 EYFQLGVNESEKQEIEKKIEERKRAKEQKDFMKADSIREEL 445


>gi|189409152|ref|NP_077210.1| probable cysteinyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|148690118|gb|EDL22065.1| mCG11180, isoform CRA_a [Mus musculus]
          Length = 552

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 144/406 (35%), Positives = 210/406 (51%), Gaps = 55/406 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYL 148

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 149 RVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAEPA 204

Query: 182 -KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+DL
Sbjct: 205 GDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDL 264

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T    
Sbjct: 265 AFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT---- 320

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------------- 336
              +   V RL  L T+YR  I+++   L EA+ LL                        
Sbjct: 321 ---FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPVE 377

Query: 337 ----WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
               W + +++K     AV +AL ND +T  A+  +  L   + + 
Sbjct: 378 EDVLWERLTSTK----KAVKAALANDFDTPRAVNTILDLVHHANRQ 419


>gi|46190761|ref|ZP_00121063.2| COG0215: Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439911|ref|YP_001954992.1| cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227545810|ref|ZP_03975859.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|312133327|ref|YP_004000666.1| cyss [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482007|ref|ZP_07941032.1| tRNA synthetase class I catalytic domain-containing protein
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690503|ref|YP_004220073.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|189428346|gb|ACD98494.1| Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227213926|gb|EEI81765.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|291517397|emb|CBK71013.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
 gi|311772544|gb|ADQ02032.1| CysS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916574|gb|EFV37971.1| tRNA synthetase class I catalytic domain-containing protein
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455359|dbj|BAJ65981.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 549

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 169/545 (31%), Positives = 251/545 (46%), Gaps = 111/545 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R  L+  Y
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+ +A                     ++F +    L  L PT 
Sbjct: 89  ---KVTFVRNVTDIDDKILVKAAA------AGQRWWARAYYYEREFTEAYNTLGVLPPTV 139

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK----I 170
           +PRAT H+  MI LIQ I+ +GH Y       +    + FD +S P+YG  + +K    +
Sbjct: 140 EPRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEV 199

Query: 171 DE-----QKMGTRV----PEKYH----------KKNPADFILWKR---STPMEPGWESPW 208
           DE      +MG  V     +KY+          K +P DF LWK    + P +  W +P+
Sbjct: 200 DEAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPF 259

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+
Sbjct: 260 GVGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAAGY--PSAARWMHS 317

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L 
Sbjct: 318 AWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALV 370

Query: 329 EAE--------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           EA+              + L   P     T+ S   +    ++A+ +D+N   A  A+  
Sbjct: 371 EAQAAYDRVSNFIERAGVALGGQPSREEVTAVSADDLPADFVAAMNDDVNVSGATAAIFT 430

Query: 371 LAR---------------ESTKNH--DLLPIFNASAHILGIEVCKEHLNKNIS------- 406
             R               E+ K    + L    A    LG++   E      +       
Sbjct: 431 AIRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGAAGGAADG 490

Query: 407 -------IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                   A+E L+ E+L       K K F+ AD IR  L   G  +ED      G + +
Sbjct: 491 TAESPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGS 544

Query: 456 RWKQK 460
            W  K
Sbjct: 545 TWSLK 549


>gi|311063769|ref|YP_003970494.1| cysteinyl-trna synthetase CysS [Bifidobacterium bifidum PRL2010]
 gi|310866088|gb|ADP35457.1| CysS Cysteinyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 540

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 245/524 (46%), Gaps = 102/524 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +LR  Y  
Sbjct: 25  LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGY-- 82

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++A                     ++F +    L  L PT++P
Sbjct: 83  -QVTFVRNVTDIDDKILDKAAAAGQQWWARAYF------YEREFTQAYDTLGVLPPTYEP 135

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQK-- 174
           RAT H+  MI LI+ II +GH Y       +    + FD +S P+YG  + +K    +  
Sbjct: 136 RATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEAD 195

Query: 175 --------MGTRVP----EKYH----------KKNPADFILWKRSTPMEPG---WESPWG 209
                   MG  V     +KY+          K +P DF LWK   P +P    W +P+G
Sbjct: 196 EAAAVADLMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFG 255

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+       ++A  W+H+ 
Sbjct: 256 VGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAVGY--ESAARWMHSA 313

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L E
Sbjct: 314 WVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALVE 366

Query: 330 AE--------------ILLSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKL 371
           A+              + L + P+ +   G+    +    +SA+ +D+N   A  A+   
Sbjct: 367 AQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTA 426

Query: 372 ARES----TKNHDLLPIFNASAHI-------------LGIEVCKE--------------H 400
            R      +K  D      A A +             LG++   E               
Sbjct: 427 IRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESR 486

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  +   I + +  R    K + F+ AD IR  L + G  +ED
Sbjct: 487 EHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED 530


>gi|149730502|ref|XP_001496717.1| PREDICTED: similar to Cysteinyl-tRNA synthetase 2, mitochondrial
           (putative) [Equus caballus]
          Length = 559

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 145/398 (36%), Positives = 206/398 (51%), Gaps = 54/398 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+  R+              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 48  VKVYNSRTRRKDPLIVGSADATSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 105

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C +  V  ITD+DDKII RAR+      +N + + + +   + F +D   L  L PT   
Sbjct: 106 CNIIMVMGITDVDDKIIRRARE------MNVSPTSLANLYEEDFKQDMAALKILPPTVYL 159

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II  GHAY  A   + FD  S  + YG      +    +G   P 
Sbjct: 160 RVTENIPQIISFIEGIIAKGHAYSTAKGNVYFDLQSRGDKYGKLV--GVAPGPVGE--PV 215

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++ +DF LWK + P E  W SPWG GRPGWHIECS +SS   G   DIH GG+DL 
Sbjct: 216 ESDKRHASDFALWKAAKPQEMFWASPWGNGRPGWHIECSTISSLVFGSQLDIHSGGIDLA 275

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ     + ++  N ++H+G L+++G+  KMSKS  N+ITI + L+T     
Sbjct: 276 FPHHENEIAQCEVFHQCKQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKTAS--- 332

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------- 336
                 V RL  + + YR  ID++   + EA+ LL                         
Sbjct: 333 ----PDVFRLFCMRSSYRSAIDYSDGAVLEAKHLLLAATAFVEDARAYMRGQLACGPIGE 388

Query: 337 ---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
              W + S +KG    AV +AL +D +T  A+ A+  L
Sbjct: 389 DVLWERLSHTKG----AVKAALADDFDTPGAVDAVMDL 422


>gi|12845041|dbj|BAB26596.1| unnamed protein product [Mus musculus]
          Length = 552

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/336 (39%), Positives = 189/336 (56%), Gaps = 25/336 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYL 148

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 149 RVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAEPA 204

Query: 182 -KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+DL
Sbjct: 205 GDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDL 264

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T    
Sbjct: 265 AFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT---- 320

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
              +   V RL  L T+YR  I+++   L EA+ LL
Sbjct: 321 ---FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLL 353


>gi|307637574|gb|ADN80024.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996165|gb|ADZ51570.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997761|gb|ADZ49969.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 465

 Score =  228 bits (581), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 232/461 (50%), Gaps = 50/461 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K
Sbjct: 115 EYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMH--NSSVEFSRIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGTD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPS 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQL 435
               + ++      IE  ++ER    + K F  AD IR++L
Sbjct: 405 AYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREEL 445


>gi|332031259|gb|EGI70793.1| Cysteinyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 518

 Score =  228 bits (580), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 161/509 (31%), Positives = 240/509 (47%), Gaps = 72/509 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++ IYN + +          + ++ Y+CGPTVYD AHIG+A   I  D++ R+L  Y+
Sbjct: 31  QTEVSIYNLITKCKVPLILKTQNILKWYICGPTVYDSAHIGHATTYIKSDIIRRILSDYF 90

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V  V  ITDIDDKII R+ +             ++     +F  D  +L    P  
Sbjct: 91  NID-VLLVMGITDIDDKIIRRSNESGKDFKT------LSRHFETEFFADMNKLNIREPYL 143

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           + R T++IPQ+I  I+ +I  G  Y A +  + F+TS    YG  S   +D       V 
Sbjct: 144 RCRVTDYIPQIIQFIEKLIAKGDGYVAPDGSVYFNTSKYNKYGKLSTLVLDTVNDQNFVG 203

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK+  DF LWK +   EP W+SPW  GRPGWHIECSA++S   G   DIH GG+DL
Sbjct: 204 ----KKSALDFALWKAAKENEPSWKSPWSYGRPGWHIECSAIASTVFGNSIDIHSGGIDL 259

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKFGG 299
            FPHHENE AQSCC   +++  N W+H G L+L+G  KMSKS  N I+I + LE      
Sbjct: 260 AFPHHENEEAQSCCYHDVDQWVNYWLHCGHLSLKGDVKMSKSLKNTISIQDYLE------ 313

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDP 349
            ++ A  +R+  L++HYR  I+F+ + +  A  +  K          +       G ID 
Sbjct: 314 -NYSANNLRMLCLLSHYRNGIEFSDEVIQTAMSVTKKIDNFINDCDNYVAGKFKTGEIDE 372

Query: 350 AVL------------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC 397
            +L            SAL +D +T  A+ A+  L     K      + + S ++  +   
Sbjct: 373 NLLYTTLHDTRSKVYSALADDFDTSKAMHAIINLVGIGNKMFHQDNVTSRSNNVSVVAAV 432

Query: 398 KEHLNK-----NISIAIEKLVQERLI------LLKMKK----------------FSSADY 430
             +L+       IS + +  V+ R I       L  +K                    D 
Sbjct: 433 SNYLSNILSKFGISRSTKSTVENRQIEDIIDHFLNFRKTVRIRALEQNPKDTILLKECDN 492

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +RK L + G +++D KN ++      WKQ
Sbjct: 493 VRKCLYTCGIMVKDQKNDNSSW---SWKQ 518


>gi|119025230|ref|YP_909075.1| cysteinyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764814|dbj|BAF38993.1| cysteinyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 543

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 167/524 (31%), Positives = 246/524 (46%), Gaps = 103/524 (19%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+T    ++ F  I P  + +Y CG TV    HIG+ R  + FDV+ R      G K V
Sbjct: 27  LYDTASHAVSSFTPIKPGQVGIYACGATVQSSPHIGHIRAAVAFDVVRRWFERL-GYK-V 84

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRN+TDIDDKI+++A            I        ++F +  ++L    PT++PRAT
Sbjct: 85  TFVRNVTDIDDKILDKAAAAGQQWWERAYIY------EREFTEAYSKLGVEPPTYEPRAT 138

Query: 127 NHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDE------- 172
            H+  MI LI+ II +GHAY            + FD +S P+YG  + +K          
Sbjct: 139 GHMIDMIDLIKKIIDNGHAYVVRDADGNPTGNVYFDVASWPHYGELTHQKQTAVSDAASE 198

Query: 173 --QKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGRGRP 213
               MG  V     +KY+          K +P DF LWK    S P++  W +P+G GRP
Sbjct: 199 VTDAMGPSVDNAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTGRP 258

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ ++  
Sbjct: 259 GWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGY--DSAARWMHSAWVTA 316

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-- 331
           +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L EA+  
Sbjct: 317 KGEKMSKSLGNGLSVPAVLAEHS----AW---VVRYALGSVQYRSMLEWSDQTLAEAQSA 369

Query: 332 ------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQA-------- 367
                         + + P      + S   +    ++A+ +D+N   A  A        
Sbjct: 370 YDRVANFIERAGAAVGEQPSREEIMAISADALPADFVAAMNDDINVSGASAAIFTAIRSG 429

Query: 368 ---LHKLARESTKN------HDLLPIFNASAHILGIEVCKEHLNKNISI----------- 407
              L KLA  +  +       + L    A    LG++   E    + +            
Sbjct: 430 NTLLSKLADRADSDVAKAEVREALVNVRAMLDTLGLDPLAEPWVSDGAAGGAAGAGADSA 489

Query: 408 ---AIEKLVQERLI----LLKMKKFSSADYIRKQLESKGFILED 444
              A++KLV E+L       K K F+ AD IR  L + G  +ED
Sbjct: 490 EHDALDKLVSEQLAERAEARKAKDFARADAIRDALGAAGIAIED 533


>gi|162453596|ref|YP_001615963.1| hypothetical protein sce5320 [Sorangium cellulosum 'So ce 56']
 gi|161164178|emb|CAN95483.1| cysS2 [Sorangium cellulosum 'So ce 56']
          Length = 512

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 164/521 (31%), Positives = 242/521 (46%), Gaps = 102/521 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK   F +  P  +R+Y CG TVY   HIG+AR    +DV  R L Y  G  
Sbjct: 3   LKVHNTLTRKKEPFVSARPKVVRIYTCGLTVYAPMHIGHARTYCFWDVFRRYLEYR-GYH 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            ++ + N TDIDD+I++RA +   ++ + +       +N   F +D  +L         R
Sbjct: 62  VLSII-NYTDIDDRIMQRASEREGAVDVAE-------RNIAAFRRDCRKLHIKDYAVYTR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT+ + + + + + +I  GHAY  N E+ ++  +   YG  S RK+DEQ++G   RV E 
Sbjct: 114 ATDFVDEQVDMAKRLIEKGHAYTVNGEVFYEVGTWAPYGELSGRKVDEQEVGASGRVEED 173

Query: 183 Y-HKKNPADFILWKRSTPMEPGW---ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++PADF LWK +   +P W   E  W  GRPGWHIECSAMS+  LG  FD+HGGG+
Sbjct: 174 FARKRHPADFSLWKPTGAGQPSWRTGEEGWPTGRPGWHIECSAMSTALLGDHFDVHGGGI 233

Query: 239 DLIFPHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           D +FPHHENEIAQS   C          W+H   L+L+  KMSKS GN I+I ELL    
Sbjct: 234 DNMFPHHENEIAQSEPLCG---RPWVRYWLHPEHLDLKDMKMSKSLGNVISIEELLSRHG 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-----------AEILLSKWPQTSTSKG 345
                W         +  HYR  + F  + L +           A +L  K   +  ++ 
Sbjct: 291 HDEARW-------FFVTQHYRCKLPFGWELLQQSAQGYARIKKLATVLAGK--LSGATEA 341

Query: 346 IIDPAV----------------------------------LSALYNDLNTVSA------- 364
            + P                                    + A+ +DLNT +A       
Sbjct: 342 PLAPGAYASQRPEEERFPRMRHHYVHGQFGEHTERFIARFIEAMDDDLNTPNAVAAFFDY 401

Query: 365 IQALHKLARESTKNH-DLLPIFNASAH---ILGIEVCKEHLNKNI--------------- 405
           + AL+    E  ++   LL ++ A      + G+E+ +  L   +               
Sbjct: 402 VSALYSAGIEQCEDRPSLLAVYRAIVRHLAVFGVEIAEPALYPELVPDYALAPAEGAAGR 461

Query: 406 --SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               AI++L+  R    K K F+ AD IR  L   G +LED
Sbjct: 462 GGDAAIDRLIAMRQEARKAKDFAKADAIRNLLIEAGVVLED 502


>gi|154486613|ref|ZP_02028020.1| hypothetical protein BIFADO_00430 [Bifidobacterium adolescentis
           L2-32]
 gi|154084476|gb|EDN83521.1| hypothetical protein BIFADO_00430 [Bifidobacterium adolescentis
           L2-32]
          Length = 553

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 167/524 (31%), Positives = 246/524 (46%), Gaps = 103/524 (19%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R      G K V
Sbjct: 37  LYDTASHAVSSFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFERL-GYK-V 94

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRN+TDIDDKI+++A            I        ++F +  ++L    PT++PRAT
Sbjct: 95  TFVRNVTDIDDKILDKAAAAGQQWWERAYIY------EREFTEAYSKLGVEPPTYEPRAT 148

Query: 127 NHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDE------- 172
            H+  MI LI+ II +GH Y            + FD +S P+YG  + +K          
Sbjct: 149 GHMIDMIDLIKKIIDNGHGYVVRDADGNPTGNVYFDVASWPHYGELTHQKQTAVSDAASE 208

Query: 173 --QKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPWGRGRP 213
               MG  V     +KY+          K +P DF LWK    S P++  W +P+G GRP
Sbjct: 209 VTDAMGPSVDNAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTGRP 268

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ ++  
Sbjct: 269 GWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGY--DSAARWMHSAWVTA 326

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-- 331
           +G KMSKS GN +++  +L        +W   V+R A+    YR  ++++ Q L EA+  
Sbjct: 327 KGEKMSKSLGNGLSVPAVLAEHS----AW---VVRYALGSVQYRSMLEWSDQTLAEAQSA 379

Query: 332 ------------ILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQA-------- 367
                         + + P      + S   +    ++A+ +D+N   A  A        
Sbjct: 380 YDRVANFIERAGAAVGEQPSREEIMAISADALPADFVAAMNDDINVSGASAAIFTAIRSG 439

Query: 368 ---LHKLARESTKN------HDLLPIFNASAHILGIEVCKEHLNKNISI----------- 407
              L KLA  +  +       + L    A    LG++   E    + +            
Sbjct: 440 NTLLSKLADRADSDVAKAEVREALVNVRAMLDTLGLDPLAEPWVSDGAAGGAAGAGADSA 499

Query: 408 ---AIEKLVQERLI----LLKMKKFSSADYIRKQLESKGFILED 444
              A++KLV E+L       K K F+ AD IR  L + G  +ED
Sbjct: 500 EHDALDKLVSEQLAERAEARKAKDFARADAIRDALGAAGIAIED 543


>gi|315607013|ref|ZP_07882019.1| cysteine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251394|gb|EFU31377.1| cysteine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 515

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 171/525 (32%), Positives = 246/525 (46%), Gaps = 96/525 (18%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQTLLIYNTLSRSKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD+          DDKI ++AR E    P+      +    T ++   
Sbjct: 61  -GYK-VRYVRNITDVGHMEHDADDGDDKIEKKARLEQLE-PME-----VAQYYTNRYHTA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P+AT HI +   L++ I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MNALNVLPPSIEPQATGHIIEQEELVKQILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172

Query: 168 RK----IDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWG------------- 209
           R     ++E +    V EK H+   ADF LWKR+ P     W S +              
Sbjct: 173 RSLENIVNESRSLAGVGEKRHQ---ADFALWKRAMPEHIMRWHSVFKYKTGSYYENKKAK 229

Query: 210 ------RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
                  G PGWH EC+AM   YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++   
Sbjct: 230 YRQITIEGFPGWHCECTAMGRKYLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVR 288

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDF 322
            W+HN  + + G+KM KS GNFIT+ +             +P+ IR  +L  HYR  +DF
Sbjct: 289 YWMHNNMITINGQKMGKSLGNFITLEQFFTGSHDSLEQAYSPMTIRFFILSAHYRSTVDF 348

Query: 323 T----------VQRLTEAEILLSKWPQTSTSKGIIDPAV-------LSALYNDLNTVSAI 365
           +          ++RL      L + P + T   + D  V         A+ +D  T   I
Sbjct: 349 SNDALKASEKGLERLMNGLSDLDRVPVSDTCDEVTDRFVKQLRQRCYDAMNDDFQTQLVI 408

Query: 366 QALHKLARESTKNHDLLPIFNASAHI-------------------LGIEVCKEHLNKNIS 406
             L +        H +  + +  AHI                   LG++      N+   
Sbjct: 409 SYLFEAC------HVVNTLLDHKAHICADCLKELAETMRLFAFDLLGLKPENGDNNEARE 462

Query: 407 IAIEKLVQERLILLKM----KKFSSADYIRKQLESKGFILEDYKN 447
            A  K+V   L L       K ++++D IR  L   GF ++D K+
Sbjct: 463 EAYGKVVDMVLSLRAKAKADKDWTTSDKIRDALADAGFEVKDTKD 507


>gi|315586833|gb|ADU41214.1| cysteine--tRNA ligase [Helicobacter pylori 35A]
          Length = 465

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 161/472 (34%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  MI +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMIGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IEK ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIEKKIEERKRAKEQKDFLKADRIREELLKQKIALMD 454


>gi|208434794|ref|YP_002266460.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226710844|sp|B5Z7P5|SYC_HELPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|208432723|gb|ACI27594.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 465

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 152/462 (32%), Positives = 232/462 (50%), Gaps = 52/462 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKSKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKAFKE------NKSIQELSSVYIESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMG-TRVPEKYH 184
            ++  M+ +I+ ++    AY  +N +I  DT+   +YGS S   +    M  +R+     
Sbjct: 115 EYLDAMVRMIETLLEKNIAYRVSNGDIYLDTTKDKDYGSLS---VHNSSMEFSRIGLVQE 171

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 172 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGA 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L      
Sbjct: 232 DLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------ 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----A 350
            +++   ++R  +L  HYR  ++F  + L  ++  L K      + S + G I+P     
Sbjct: 285 -KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVSGTLGGINPNFKKE 343

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKE 399
           +L  + +DLN   A+  L  +   + +  D           +L        +LGI     
Sbjct: 344 ILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDP 403

Query: 400 HLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQL 435
                + ++      IE  ++ER    + K F  AD IR++L
Sbjct: 404 SAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREEL 445


>gi|108563291|ref|YP_627607.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373736|sp|Q1CSY9|SYC_HELPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|107837064|gb|ABF84933.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 465

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 156/472 (33%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+++I+ ++    AY  +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 SDLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLENMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402

Query: 399 EHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + ++      IE  ++ER    + K F  AD IR++L ++   L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADRIREELLNRKIALMD 454


>gi|19922218|ref|NP_610930.1| CG8257 [Drosophila melanogaster]
 gi|7303228|gb|AAF58291.1| CG8257 [Drosophila melanogaster]
 gi|16183283|gb|AAL13681.1| GH24360p [Drosophila melanogaster]
 gi|220945642|gb|ACL85364.1| CG8257-PA [synthetic construct]
 gi|220955498|gb|ACL90292.1| CG8257-PA [synthetic construct]
          Length = 558

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 143/391 (36%), Positives = 198/391 (50%), Gaps = 47/391 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYN   R+       +P  +  Y CGPTVYD AH+G+A   +  D+L R+LR Y+   
Sbjct: 48  INIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII+RA+              +      +F +D  RL   AP  +  
Sbjct: 108 LVTAM-NITDVDDKIIKRAQLAGLDW------QKMARAYEAEFRQDMLRLNVQAPDVRSH 160

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T  +P +I  IQ +I    AY   +N + FD S   NYG      + E K+        
Sbjct: 161 VTTTMPVIIQFIQQLIDGKQAYVTPDNSVYFDVSKSKNYGKLQNLGLSEDKLDP------ 214

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N ADF LWK R +  EP W +PWG  GRPGWHIECSA++  + G+  DIH GGLDL 
Sbjct: 215 IKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDIHAGGLDLR 274

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQ C   + ++  N W+H G L++ G   KMSKS GN I+++ELL       
Sbjct: 275 FPHHENEEAQCCARYKTDQWVNYWVHTGQLHMVGDREKMSKSLGNTISVSELL------- 327

Query: 300 RSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + + A   R+A L+++YR  + +          T+QR    +  LS + Q      ++D 
Sbjct: 328 KKYTADEFRMACLLSNYRNAMPYSDQLMVTARQTLQRFRNFQADLSAYTQFLKPVHLLDE 387

Query: 350 AVLSA------------LYNDLNTVSAIQAL 368
             L A            L +D +T  AI  L
Sbjct: 388 GALKAQLTHTVTEFDNCLRDDFDTARAISVL 418


>gi|317180259|dbj|BAJ58045.1| cysteinyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 465

 Score =  227 bits (578), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+++      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKSKQKVPFESLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ S+    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKALKENKSVQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALRGEILANLKFIEELLGIGFKN 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMD 454


>gi|298715268|emb|CBJ27917.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 664

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 136/344 (39%), Positives = 182/344 (52%), Gaps = 40/344 (11%)

Query: 22  DPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DPS   ++ Y CGPTVYD AH+G+AR  +  DV+ R+L  Y+    VTY   ITD+DDKI
Sbjct: 60  DPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYF-RFDVTYALGITDVDDKI 118

Query: 80  IERARQ----EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           I RAR+    E P       ++ + ++  +QF++D + L    P    R T+HIP ++  
Sbjct: 119 IARARENGLREWPE------VAEMAAEFERQFLEDMSDLGVRPPDALTRVTDHIPDIVAY 172

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPN-YGSF----SRRKIDEQKMGTRVPEKYHKKNPAD 190
           IQ I+ +G  YEA   + FD   +   YG      S     E++ G+   E   K++  D
Sbjct: 173 IQRILENGMGYEAAGGVYFDVEGMGGAYGKLGVKASSSTTPEEEGGS---ELRGKRSHKD 229

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   EP WESP+GRGRPGWHIECSAM+    G   D+H GG+DL FPHH NEIA
Sbjct: 230 FALWKTAKADEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGVDLKFPHHTNEIA 289

Query: 251 QS---CCADRIEKTANI---------------WIHNGFLNLEGRKMSKSNGNFITINELL 292
           Q     C       A                 WIH G LN+EG KMSKS  NF+TI E L
Sbjct: 290 QCEAHACGGVAATAAATGDGGVGGERKPWVRHWIHTGHLNIEGLKMSKSLKNFVTIREYL 349

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           E     G+   A   R+  LM  Y   + F+  R+ EA ++  +
Sbjct: 350 EGHS-AGQEAAAEDFRMFCLMHKYSSNVTFSEDRMEEASVVRGR 392


>gi|261838269|gb|ACX98035.1| cysteinyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 465

 Score =  226 bits (577), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD+IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADHIREELLKQKIALMD 454


>gi|217034711|ref|ZP_03440113.1| hypothetical protein HP9810_896g8 [Helicobacter pylori 98-10]
 gi|216942824|gb|EEC22321.1| hypothetical protein HP9810_896g8 [Helicobacter pylori 98-10]
          Length = 465

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 238/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI     I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSGIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFSRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNSKNKALKGEILANLKFVEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMD 454


>gi|195149692|ref|XP_002015790.1| GL10829 [Drosophila persimilis]
 gi|194109637|gb|EDW31680.1| GL10829 [Drosophila persimilis]
          Length = 556

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 129/340 (37%), Positives = 190/340 (55%), Gaps = 28/340 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYN   R+       +P+ +  Y CGPTVYD AH+G+A   +  D++ R+LR Y+   
Sbjct: 48  IRIYNNGMRRKVPLILRNPNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQRILRNYFNIN 107

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII +AR         D + +  +   + F +D  RL    P  +  
Sbjct: 108 LVTAM-NITDVDDKIIRKARDSGC-----DWLGMARTYEAE-FKQDMLRLNVQPPDIRTH 160

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
            T+++P ++  I+ +I   HAY   +N + FD S  P+YG         Q++G    EK 
Sbjct: 161 VTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPHYGKL-------QRLGMSTEEKS 213

Query: 183 -YHKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK +    EP W +PWG  GRPGWHIECSA++  + G   D H GGLD
Sbjct: 214 DLFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAGFFFGHKLDFHAGGLD 273

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + ++  N W+H G L + G  +KMSKS GN I+I+E+L+    
Sbjct: 274 LRFPHHENEEAQCCVRYQTDQWVNYWMHTGQLYIAGDEQKMSKSLGNTISISEMLQ---- 329

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
              S+ +   R+A L+++YR  + ++ Q +  A   L ++
Sbjct: 330 ---SYTSDEFRMACLLSNYRNAMPYSEQLMLTARQTLQRF 366


>gi|322369387|ref|ZP_08043952.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551119|gb|EFW92768.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 495

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 153/502 (30%), Positives = 237/502 (47%), Gaps = 74/502 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           + NTL  +   F+  DP ++ +Y CG TV DFAH+G+AR  I  DV++R L +   +  V
Sbjct: 5   VTNTLTGEREPFEPGDPDSVLLYYCGLTVSDFAHLGHARGWIHTDVMHRWLEHLGYD--V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +V N TD+++KI  R  ++     + D  + +      Q ++D   L        PR +
Sbjct: 63  HHVENFTDVNEKITARVGED----DLGDDEADVARTFITQVIRDMRDLNLKRADVYPRVS 118

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            H+P++  LI+ ++  G+AYE+N  + FD ++  +YG  S ++++E +      E+  K+
Sbjct: 119 EHLPEITDLIETLVEKGYAYESNGSVYFDVTTFEDYGKLSNQRVEEMEAQGEGDERGEKR 178

Query: 187 NPADFILWKR--------------------STPMEPGWESPWGRGRPGWHIECSAMSSHY 226
           +P DF LWK                     S P    W+SPWG GRPGWHIECSAMS  +
Sbjct: 179 HPGDFALWKADGVSEGAVEEHRDPDTEYAVSHPSGQTWDSPWGEGRPGWHIECSAMSMEH 238

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+  DIH GG DL+FPHHENEIAQS  A    + A  W+H   L  EG KMS S GN+ 
Sbjct: 239 LGETIDIHVGGQDLVFPHHENEIAQSEAA-TGHQFARYWLHVRLLETEGEKMSSSLGNYS 297

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---------------E 331
           T+   +   + G     A  +R+ +L T Y     F+ + L EA               E
Sbjct: 298 TVRGAI--SEIG-----ANAVRMFLLSTSYANRQTFSDETLNEAVERWDRLSDGYDRAVE 350

Query: 332 ILLSKWPQTSTSKGIIDPAVL-------SALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
            L     +T      +  AV         A+ +D NT  A+ AL  L     ++ D    
Sbjct: 351 ALDGPDARTKVEDDELRQAVTETREEFADAMNDDFNTRRALAALLDLVTAVNRHADAHEE 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAI-----------EKLVQERLILLKMKK----FSSAD 429
           ++       +E  +E     +  ++           E LV+  L L + ++    +  AD
Sbjct: 411 YDYDGLKSAVETFEELGGDVLGFSLGGEAGGDVRLAEDLVELVLDLREGERDAGNYDRAD 470

Query: 430 YIRKQLESKGFILEDYKNPDNG 451
            +R  L++ G    D ++ D+G
Sbjct: 471 ALRDDLQALGV---DVQDSDSG 489


>gi|308183038|ref|YP_003927165.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065223|gb|ADO07115.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 465

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANSPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMD 454


>gi|281202238|gb|EFA76443.1| cysteinyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 633

 Score =  226 bits (577), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 133/333 (39%), Positives = 194/333 (58%), Gaps = 22/333 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++IYN+L      F  I    ++  Y+CGPTVYD +H+G+AR  I FD++ R+++ Y G
Sbjct: 29  ELQIYNSLTSSKVPFTPISGGKSVSWYICGPTVYDASHMGHARSYISFDIIRRIMKDYLG 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y+ NITDIDDKII R+R++  +       + ++ K    F  D   L  L P   
Sbjct: 89  YD-VQYIMNITDIDDKIIIRSREQGITH------TELSRKWENSFFDDLKALNVLPPDAL 141

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS---IPNYGSFSRRKIDEQKMGTR- 178
            R T ++P+++  ++ II +G AYE+N  + FDT +   +  YG      +  +K+ +  
Sbjct: 142 TRVTEYVPEIVTFVEKIIANGFAYESNGSVYFDTEAYMKVHEYGKLEPSSVGNEKLNSEG 201

Query: 179 ---VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +     K+N  DF LWK+S   EP W SPWG GRPGWHIECSAM+S  LG   DIH 
Sbjct: 202 EGALSAGSDKRNNNDFALWKKSKEGEPKWNSPWGEGRPGWHIECSAMASDILGANIDIHS 261

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHH+NEIAQS      ++  N +IH+G L ++G KMSKS  NFITI + L  K
Sbjct: 262 GGEDLKFPHHDNEIAQSEAHYGCKQWINYFIHSGHLLIDGLKMSKSLKNFITIQDAL--K 319

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           K+  R      IR+  L+  Y +P++++ + +T
Sbjct: 320 KYTARQ-----IRMLFLIHRYDKPMNYSTESMT 347


>gi|317177679|dbj|BAJ55468.1| cysteinyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 465

 Score =  226 bits (576), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 160/472 (33%), Positives = 238/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI     I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSGIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVGIIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    K K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKKQKDFLKADRIREELLKQKIALMD 454


>gi|15611885|ref|NP_223536.1| cysteinyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6831687|sp|Q9ZKW6|SYC_HELPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4155389|gb|AAD06399.1| CYSTEINYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 465

 Score =  226 bits (576), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 234/470 (49%), Gaps = 50/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVHNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S      +   +R+     K
Sbjct: 115 EYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHNSSVE--FSRIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGTD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPS 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + ++      IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 405 AYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLQQKIALMD 454


>gi|284931715|gb|ADC31653.1| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 435

 Score =  226 bits (576), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 140/384 (36%), Positives = 207/384 (53%), Gaps = 36/384 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL +   +   ID + I +YVCGPTVYD  HIGN RP++ FDVL RLL +    K
Sbjct: 1   MKLYDTLTKTNVD---IDANEINIYVCGPTVYDHIHIGNLRPIVTFDVLRRLLEH--SNK 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITDIDDKII +A++      +N +   +T + T  + +    L    P    +
Sbjct: 56  KVNFVHNITDIDDKIINQAQR------LNLSEEEVTKRYTSAYFEILDALNIKLPK-IVK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  +I  I+ I    +AYE + +I FDT+ IP+YG  S+RK+DEQ  G RV    +
Sbjct: 109 VTDVMNGIIKYIEKIYDKQYAYELDGDIYFDTTRIPDYGVLSKRKLDEQISGIRVKSNEN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS-AMSSHYLGKVFDIHGGGLDLIFP 243
           K +P DF+LWK+ T     W S +G GRPGWH EC+  +   +  K F IHGGG+DL+FP
Sbjct: 169 KTSPNDFVLWKK-TVNGIKWNSKFGLGRPGWHTECAYIIDQEFKQKGFVIHGGGIDLVFP 227

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+      +  AN W+H G L ++  KMSKS  NFI +  L+E+  +      
Sbjct: 228 HHENENAQNLALHN-KNLANCWVHVGHLLIDNEKMSKSLNNFIYVKHLIESHNYRA---- 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------SKGIIDP 349
              IR     T + +P++F    +  A+  + K   T                S  ++  
Sbjct: 283 ---IRWVFYNTAHTQPLNFDGTIIKAAQKDVEKIISTVNRFRTFLIANKNNIPSSSLVCE 339

Query: 350 AVLSALYNDLNTVSAIQALHKLAR 373
               AL+++LN  +A + +  L +
Sbjct: 340 EFKKALFDNLNFANATKVIWDLIK 363


>gi|187919716|ref|YP_001888747.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187718154|gb|ACD19377.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 462

 Score =  226 bits (576), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 158/467 (33%), Positives = 218/467 (46%), Gaps = 48/467 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R + EF  I P ++ +Y CGPTVYD AHIGN R  +  DVL R L       
Sbjct: 3   LRLYDTWTRTVREFTPIHPDHVGLYCCGPTVYDHAHIGNLRTYVFEDVLRRAL--VLNGY 60

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V +V NITD+     D      + E  S    ++   I  + T  F+ D   L  L P 
Sbjct: 61  NVRHVVNITDVGHLVSDADEGEDKMEKGSRRTGESAWAIAERYTAAFMNDWRALNLLEPA 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
              RAT+HI + I  I  +  +G  Y   + + FDTS   +YG  +R  +   + G RV 
Sbjct: 121 LWCRATDHIAEQIDFIAELERNGFTYRTADGVYFDTSRQDDYGYLARLDVAGLQAGKRVA 180

Query: 181 EKYHKKNPADFILWKRSTP-----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               K+   DF LWK S P     ME  W+SPWGRG PGWHIECSAMS+ YL   FDIH 
Sbjct: 181 PG-EKQRATDFALWKFSPPGATRQME--WDSPWGRGFPGWHIECSAMSAKYLSPWFDIHC 237

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ+  A    + AN W+H  FL L+  KMSKS G+F+ +  L E  
Sbjct: 238 GGEDHIPVHHSNEIAQT-QARYGTRLANFWMHGHFLLLDAGKMSKSGGDFLRLQTLSE-- 294

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKG 345
               R       R   L  HYR  + F+          + RL  +    ++WPQ      
Sbjct: 295 ----RGNDPLAYRYLCLSAHYRSSLRFSEAALDAAQAALDRLRRS---YARWPQGGKPDA 347

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--------LGIEVC 397
                  + + +DLN   A+  L  + R        LP     A +        LG+   
Sbjct: 348 ASVARFKAEVDHDLNLPRALAVLWDVVRSD------LPPATRRASVDCFDVVLGLGLADW 401

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           K+     +   I  L  +R      K++S AD +R  + + G+++ED
Sbjct: 402 KDVDTPELPAEIAALADQRERARAAKQWSEADRLRDVMTAAGWLVED 448


>gi|188524105|ref|ZP_03004185.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867746|ref|ZP_03079747.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273408|ref|ZP_03205944.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|195660058|gb|EDX53438.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660601|gb|EDX53857.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249928|gb|EDY74708.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
          Length = 436

 Score =  226 bits (576), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/468 (32%), Positives = 230/468 (49%), Gaps = 63/468 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   K+ E   I    I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +  E 
Sbjct: 1   MKLYDSYSNKLVE---ISDKLISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKHNIE- 56

Query: 65  CVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              YV NITDIDDKII  A        E      N+ + I  + NT + +          
Sbjct: 57  -TKYVLNITDIDDKIINYALANNLKELEVSEYYFNEYLKIKKALNTLEMI---------- 105

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               P+ + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R
Sbjct: 106 ---NPKVSTHMDKIINYIQKLIDKQAGYFVGDDVYFDTKKALNYGQLSKRDLENDIVGMR 162

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    +K+NP DFILWK+ T     W +PWG GRPGWH ECS + + Y+G+   IHGGG+
Sbjct: 163 IENVVNKRNPNDFILWKK-TNKGIMWNTPWGIGRPGWHSECSCLINAYIGEQVSIHGGGI 221

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL      
Sbjct: 222 DLKFPHHENENAQNQVLYN-KNLAKVWMHFGLVNVNNEKMSKSLNNFILVKDLLA----- 275

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
              +   V+R       Y++PI F+  + +  E EI   K    +    +     L +L 
Sbjct: 276 --QYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEIFKIKNTIYNAKNYLYFNHELKSLV 333

Query: 357 -------------NDLNTVSAIQALH-------KLARESTKNHDL---LPIFNASAHILG 393
                        +DL+ V  +  +H        L +E+   ++L   L        ILG
Sbjct: 334 PIDHFKPFDELINDDLDFVGIVDLIHISVKKINTLIKENKNINELKLNLVQLLYMLDILG 393

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           IE    H ++N++     L+      +  K ++ AD +RK+L + G +
Sbjct: 394 IEFIDLHNDENLA-----LLNAWKNYVDKKDYTKADELRKELINIGIL 436


>gi|308062209|gb|ADO04097.1| cysteinyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 465

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 157/470 (33%), Positives = 236/470 (50%), Gaps = 50/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK-- 398
           L  + +DLN   A+  L  +   + +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKDPV 404

Query: 399 EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 405 EYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMD 454


>gi|301778487|ref|XP_002924663.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 611

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 179/314 (57%), Gaps = 24/314 (7%)

Query: 23  PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDDKIIE 81
           P+  R Y CGPTVYD AH+G+A   + FD++ R+L   +G  C +  V  ITD+DDKII 
Sbjct: 118 PTASRGYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG--CNIIMVMGITDVDDKIIR 175

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
           RA +      +N + + + +   + F +D   L  L PT   R T +IPQ+I  I+ II 
Sbjct: 176 RAAE------MNVSPASLANLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIA 229

Query: 142 HGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
           +GHAY  A   + FD  SI + YG      +         P    K++ +DF LWK + P
Sbjct: 230 NGHAYSTAQGNVYFDLRSIGDKYGKL----VGAVPSPVGEPVDSDKRHASDFALWKAAKP 285

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            E  W SPWG+GRPGWHIECS +SS   G+  DIH GG DL FPHHENEIAQ     +  
Sbjct: 286 QEVFWASPWGKGRPGWHIECSTISSLVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCR 345

Query: 260 KTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
           +  N ++H+G L+++G+  KMSKS  N+ITI + L+T       +P  V RL  + + YR
Sbjct: 346 QWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT-------FPPDVFRLFCMRSAYR 398

Query: 318 EPIDFTVQRLTEAE 331
             ID++   + EA+
Sbjct: 399 SAIDYSDGTMLEAK 412


>gi|317014292|gb|ADU81728.1| cysteinyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 465

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 235/470 (50%), Gaps = 50/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLIHNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI     I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKAFKENKSIQELSNIYI------ESYTRDLNALNVKQPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K
Sbjct: 115 EYLDAMVSMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMH--NSSVEFSRIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGTD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI     +
Sbjct: 345 LECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPN 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + ++      IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 405 AYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLQQKIALMD 454


>gi|159900776|ref|YP_001547023.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893815|gb|ABX06895.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 396

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/384 (34%), Positives = 203/384 (52%), Gaps = 34/384 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+TL +     + ID   +RMYVCG T YD  H+G+AR  +V+D + R L +      V
Sbjct: 3   LYDTLCQTPVAMEPID-GFVRMYVCGVTPYDTTHMGHARTYVVYDTIRRYLEWQ--GLPV 59

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N+TDIDD I+ ++ Q      +      +  + T++F++D   L    P H  +AT
Sbjct: 60  LYVQNVTDIDDDILRKSAQ------LGLTWDELGRQETERFLRDMDALNVRMPNHYVKAT 113

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSF------SRRKIDEQKMGTRVP 180
           + I ++I +   +I  G AYE    + F+  + P++GS       S   I  ++     P
Sbjct: 114 DAIAKIIEVNSGLIERGVAYENQGNVYFNVHADPDFGSLAHSDYASMLAIANER--GNFP 171

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  HK++P DF+LW+ + P EP W+SPWGRGRPGWHIEC+AM   YLG   +IHGGG DL
Sbjct: 172 DDPHKRDPLDFVLWQATKPGEPWWDSPWGRGRPGWHIECTAMVLEYLGPQINIHGGGSDL 231

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHH  E+AQ+            W H G +  EG KMSKS GN +  ++ L+       
Sbjct: 232 QFPHHACELAQAENFTGQSPHVAAWSHIGMVYYEGEKMSKSLGNLVLASKTLQ------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
            + A  IRL +L  +YR+  +++   +   E  + ++ Q   S G+   A+         
Sbjct: 285 HYSADAIRLGLLKYYYRDQFEYSNDDVAWGERTVERFKQAVNS-GVSGGALHAEELRNEA 343

Query: 352 LSALYNDLNTVSAIQALHKLARES 375
           ++AL  D  T + +QAL  LA  S
Sbjct: 344 IAALDADFQTPACLQALITLAEAS 367


>gi|312892185|ref|ZP_07751682.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295315|gb|EFQ72487.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 486

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 158/482 (32%), Positives = 240/482 (49%), Gaps = 40/482 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK  EF+ ++  ++ MYVCGPTVY   H+GN R  I FD+++R L + 
Sbjct: 1   MEQKLFVYNTLTRKKEEFKPLNAPHVGMYVCGPTVYSDVHLGNCRTFISFDLIFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      +    E           +    I  + T  F +       
Sbjct: 61  GYQ--VRYVRNITDAGHLEGDADEGEDKISKKAKIAKLEPMEIVQRYTVGFHEIMQVFNA 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I L++ I+  G AYE +  + FD    ++  +YG  + R +D+ 
Sbjct: 119 LPPSIEPTATGHIIEQIELVKLILEKGFAYEVDGSVYFDVEKYNATQDYGILNGRNLDDL 178

Query: 174 KMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR +  +  K    DF LW ++ P     W SPWG G PGWH+ECSAMS  YLG+ F
Sbjct: 179 LNNTRTLGGQDDKHGKLDFALWIKAKPEHLMKWPSPWGLGFPGWHLECSAMSHKYLGEQF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+  HH NEIAQ+  A   +  A  WIH   L + G+KMSKS GN    +EL
Sbjct: 239 DIHGGGIDLMPTHHTNEIAQN-VASCGKNPALYWIHTNMLTVNGQKMSKSLGNSFLPHEL 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQT 340
              T     + +    +R  M+  HYR  +DF+           +RL  A  L++    +
Sbjct: 298 FAGTHSLLTKGYSPMTVRFFMMQAHYRSTLDFSNEAMEASEKGFKRLMNAFALVNGLKAS 357

Query: 341 STSK---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
           + S      +     +A+ +D N+   I  L ++++     HD         L  + N  
Sbjct: 358 AESDVNVAELQSKCYAAINDDFNSPVLIAELFEISKIVNSVHDGKLKIDQNNLQLLQNIM 417

Query: 389 AH----ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            H    ILG++  ++  N+ +   I+ ++  R    K   ++++D IR  L+  GF L+D
Sbjct: 418 QHFVVDILGLK-DEQAANEELPKVIDFIINLRSEAKKNMDYATSDKIRIGLQQIGFQLKD 476

Query: 445 YK 446
            K
Sbjct: 477 SK 478


>gi|261415170|ref|YP_003248853.1| cysteinyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371626|gb|ACX74371.1| cysteinyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326975|gb|ADL26176.1| cysteine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 484

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 166/492 (33%), Positives = 235/492 (47%), Gaps = 69/492 (14%)

Query: 5   IKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++ YNT  RK   F   +  P+ +RMY CGPTVY FAHIGN R  I  D L R L YY G
Sbjct: 3   LQFYNTASRKKELFTLPEGVPA-VRMYCCGPTVYHFAHIGNLRTYIFEDFLVRTLNYY-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V ++ NITD+          DDK+ + A +E  S+        I    T  F+ D  
Sbjct: 61  YK-VNHIVNITDVGHLTSDGDTGDDKMEKGAAREGKSV------WDIAKFYTDAFMADWH 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
           RL    PT   RAT+HI + I L++ +   G  Y  ++ I FD+   P Y  F+R  ++ 
Sbjct: 114 RLNIQEPTRWTRATDHIQEQIDLVKTLEEKGFTYRTSDGIYFDSLKFPRYADFARLDVEN 173

Query: 173 QKMGTRVPEKYHKKNPADFILWK-----RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
            + G+R+ +   K N  DF LWK     +   ME  W+SPWG G PGWHIECSAM+  Y 
Sbjct: 174 LRKGSRI-DMGEKHNATDFALWKFSPTDKKRAME--WDSPWGVGFPGWHIECSAMAMKYN 230

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR----------- 276
           G   DIH GG D I  HH NEIAQS CA+ ++  +  W+H  FL                
Sbjct: 231 GPTLDIHCGGTDHIRVHHTNEIAQSECANGVQ-FSRFWMHGEFLRTASEEKLEDGTTEQK 289

Query: 277 --KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---- 330
             KMSKS+G F+T+  L+E      R +     R   L +HYR  ++FT + LT A    
Sbjct: 290 FGKMSKSSGEFLTVTLLME------RGFNPLDYRYFALGSHYRNYLNFTWEALTGAKEAF 343

Query: 331 -------EILLSKWPQ-TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
                  + L+ K    TS +          A+ +DLN   A+  ++ + +    + +  
Sbjct: 344 KSLHKKTDPLIGKATAITSEAAKAFQQEFKDAIGDDLNMPRALGIMNTMLKSDIDDGEKA 403

Query: 383 PIFNASAHILGI-------EVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQ 434
            +      I G+       E  K+  N NI  A IE L+  R      K ++ +D IR +
Sbjct: 404 ALVADFDKIFGLKLDQPREEYVKKGANDNIDTAKIEALIAARKEARANKNWAESDRIRDE 463

Query: 435 LESKGFILEDYK 446
           L +   +++D K
Sbjct: 464 LAAMNIVIKDSK 475


>gi|72162231|ref|YP_289888.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123733517|sp|Q47NV4|MSHC_THEFY RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|71915963|gb|AAZ55865.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 412

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 135/364 (37%), Positives = 194/364 (53%), Gaps = 35/364 (9%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           +  RMYVCG T YD AH+G+A   + FD++ R+ R       V YV+NITDIDD ++ERA
Sbjct: 38  ATARMYVCGITPYDAAHLGHAFTYLTFDLVNRVWRD--AGHTVDYVQNITDIDDPLLERA 95

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL-- 141
                          + ++  Q F +D   L  L     PRA   + + + LI + +   
Sbjct: 96  ------AATGQDWQELAAREIQVFREDMAALRIL----PPRAFLGVVESMDLIADFVARL 145

Query: 142 --HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV------PEKYHKKNPADFIL 193
              G  YE + +I F  +  P +GS S  ++D   M          P +  KK+P D++L
Sbjct: 146 RAQGVTYEVDGDIYFSAADAPGFGSLS--QLDRTAMLELFAERGGDPGRAGKKDPLDWLL 203

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W+   P EP W++P GRGRPGWH+ECSA+S H LG  FD++GGG DLIFPHHE   A++C
Sbjct: 204 WRAERPGEPAWDTPLGRGRPGWHVECSAISVHELGMGFDLNGGGDDLIFPHHEMGAAEAC 263

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           CA      A  ++H   + L+G KMSKS GN + +++L   +K G        IRLA+L 
Sbjct: 264 CATGSRPQARHYLHVAMVGLDGEKMSKSRGNLVFVSQL---RKAGTDPM---AIRLALLA 317

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAIQAL 368
            HYR   ++T   L  AE  L +W   +  +   D       V SAL +DL+T +A+ A+
Sbjct: 318 HHYRTAWEWTDADLRTAEQRLERWRAAAAVENAPDARPLLARVRSALADDLDTATALAAV 377

Query: 369 HKLA 372
            + A
Sbjct: 378 DEWA 381


>gi|322688493|ref|YP_004208227.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|320459829|dbj|BAJ70449.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 549

 Score =  226 bits (575), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 169/545 (31%), Positives = 250/545 (45%), Gaps = 111/545 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R  L+  Y
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+ +A                     ++F +    L  L PT 
Sbjct: 89  ---KVTFVRNVTDIDDKILVKAAA------AGQRWWARAYYYEREFTEAYNTLGVLPPTV 139

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK----I 170
           +PRAT H+  MI LIQ I+ +GH Y       +    + FD +S P+YG  + +K    +
Sbjct: 140 EPRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEV 199

Query: 171 DE-----QKMGTRV----PEKYH----------KKNPADFILWKR---STPMEPGWESPW 208
           DE      +MG  V     +KY+          K +P DF LWK    + P +  W +P+
Sbjct: 200 DEAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPF 259

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+
Sbjct: 260 GVGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAAGY--PSAARWMHS 317

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L 
Sbjct: 318 AWVTAKGEKMSKSLGTGLSVPSVLAEHS----AW---VVRYALGSVQYRSMLEWSDQALV 370

Query: 329 EAEILLSKWPQTSTSKGII---------DPAV---------LSALYNDLNTVSAIQALHK 370
           EA+    +        G+           PAV         ++A+ +D+N   A  A+  
Sbjct: 371 EAQAAYDRVSNFIERAGVALGGQPSREEVPAVSADDLPADFVAAMNDDVNVSGATAAIFT 430

Query: 371 LAR---------------ESTKNH--DLLPIFNASAHILGIEVCKEHLNKNIS------- 406
             R               E+ K    + L    A    LG++   E      +       
Sbjct: 431 AIRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGAAGGAADG 490

Query: 407 -------IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                   A+E L+ E+L       K K F+ AD IR  L   G  +ED      G + +
Sbjct: 491 TAESPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGS 544

Query: 456 RWKQK 460
            W  K
Sbjct: 545 TWSLK 549


>gi|221055309|ref|XP_002258793.1| cysteine--trna ligase [Plasmodium knowlesi strain H]
 gi|193808863|emb|CAQ39566.1| cysteine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 695

 Score =  226 bits (575), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 130/298 (43%), Positives = 173/298 (58%), Gaps = 20/298 (6%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           + N+L R   EF   +   IR Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ +  V
Sbjct: 126 VNNSLTRSKVEFVPQEKDQIRWYACGPTVYDAAHLGHARTYVSFDIIRRILVNYF-KYDV 184

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V NITDIDDKII+R+ +E  S       + +  K   +F +D  +L  L PT   R +
Sbjct: 185 FMVINITDIDDKIIKRSEEEKVSF------TELARKWELEFWEDMKKLNVLLPTAITRVS 238

Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIP-NYGSFSRR----------KIDEQK 174
            ++ Q+I+ I+ II + +AY      + FD  +   N   F  R          KI E +
Sbjct: 239 EYVDQIIHYIEKIIENKYAYVSEEGSVYFDIDAFKKNPKHFYARMEPLSVKDETKILEGE 298

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               V  K  KKN  DF LWK S P EP W SPWG+GRPGWHIECS M+S+ LG V DIH
Sbjct: 299 GDLGVISK-KKKNSYDFALWKSSKPNEPYWNSPWGKGRPGWHIECSTMASNILGSVLDIH 357

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
            GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +L
Sbjct: 358 SGGVDLRFPHHDNELAQSEAFFDASQWVNYFLHSGHLHIEGLKMSKSLKNFITIKHML 415


>gi|257051141|ref|YP_003128974.1| cysteinyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256689904|gb|ACV10241.1| cysteinyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 496

 Score =  226 bits (575), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 147/503 (29%), Positives = 235/503 (46%), Gaps = 76/503 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL  +   F+  DP  + +Y CG T  D  H+G+AR  +  DV++R L +   + 
Sbjct: 3   LRVTNTLSGEREAFEPQDPDAVTLYYCGLTTSDPPHLGHARGWVHVDVMHRWLSWLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+++KI+ R  +      +  + + +     Q  ++D   L        PR
Sbjct: 62  -VHHVENFTDVNEKIVARVGE------VGGSEADVARTYIQDVIRDMRSLNLKRAEVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+P++I L++ +I  G+AYEAN  + FD ++  +YG  S + ++E        E+  
Sbjct: 115 VSEHVPEIIDLVETLIDRGYAYEANGSVYFDVTAFEDYGELSNQTVEELDAQGDPDERGE 174

Query: 185 KKNPADFILWKR---------------STPMEPG------WESPWGRGRPGWHIECSAMS 223
           K++P DF LWK                + P E        W+SPWG+GRPGWHIECSAMS
Sbjct: 175 KRHPQDFALWKAGGVDPADIGAHRHADAAPAEDACRTAQTWDSPWGQGRPGWHIECSAMS 234

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             +LG+  DIH GG DL+FPHHENE+AQS  A   ++ AN W+H G L     KMS S G
Sbjct: 235 MTHLGETIDIHVGGQDLVFPHHENEVAQSEAATG-DRFANYWLHVGLLETGEEKMSSSLG 293

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQ 339
           NF T+ + +     G       V+R  +L T Y     +T + L+EA    E L   + +
Sbjct: 294 NFATVEDAIAEYGLG-------VVRTFLLSTAYHSRAAYTEETLSEATKRFETLERGYER 346

Query: 340 TSTSKGIIDP------------------AVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
              +   +D                   A+  A+ +D NT  A+ AL +      ++ D 
Sbjct: 347 AVEAADSVDATAKTTDDALREAVETVREAIPRAMNDDFNTREALAALVEFTSAVNRHVDE 406

Query: 382 LPIFNASAHILGIEVCKEH--------LNKNISIAIEKLVQERLILLKMK---------K 424
           +  ++       I+V  E         L    S   +  + E L+ L +           
Sbjct: 407 VEPYDYRGLRRAIDVYDEFAVGVLGLPLGDGGSDTGDVRLAEDLVELVLDVRAQERDAGN 466

Query: 425 FSSADYIRKQLESKGFILEDYKN 447
           +  AD +R +L + G  ++D  +
Sbjct: 467 YERADELRDELAALGVEVQDSDD 489


>gi|85000123|ref|XP_954780.1| cysteinyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65302926|emb|CAI75304.1| cysteinyl-tRNA synthetase, putative [Theileria annulata]
          Length = 694

 Score =  225 bits (574), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 177/318 (55%), Gaps = 25/318 (7%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
            EF   +   +R Y CGPTVYD AH+G+AR  I  D +  +L  Y     + +V NITD+
Sbjct: 80  VEFVPEEGRKVRWYTCGPTVYDAAHMGHARTYIACDTIRSILENYLNYD-LFFVENITDV 138

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           +DKII+RA  E          + +TS   ++F  D   L    P    R ++++ +++  
Sbjct: 139 EDKIIQRALNE------GKPFTEVTSHWEKEFWNDMLSLGVSLPDCITRVSDYMTEIVDF 192

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----------GTRVPEKYHK 185
           I+ I+ +G+AY ++  + FD  S  N G     K++              GT      +K
Sbjct: 193 IKKILDNGYAYVSDGSVYFDIESFRNSGKHVYAKLEPTSFNDLNRILDAEGTLGEVSLNK 252

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPH 244
           K+ +DF LWK+S   EP WESPWGRGRPGWHIECSAMS+   GK VFDIH GG+DL FPH
Sbjct: 253 KSKSDFALWKKSKVNEPSWESPWGRGRPGWHIECSAMSTCIFGKEVFDIHSGGIDLRFPH 312

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NEIAQS       + AN ++H G L++ G KMSKS  NFIT+ E+L   K+  R    
Sbjct: 313 HDNEIAQSEAYFDTNRWANYFLHFGHLHIHGLKMSKSLKNFITVKEMLS--KYNKRQ--- 367

Query: 305 PVIRLAMLMTHYREPIDF 322
             IRL  L + Y   ++F
Sbjct: 368 --IRLLFLNSRYDSTLNF 383


>gi|308184667|ref|YP_003928800.1| cysteinyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060587|gb|ADO02483.1| cysteinyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 465

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 152/461 (32%), Positives = 232/461 (50%), Gaps = 50/461 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+++I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K
Sbjct: 115 EYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L       
Sbjct: 233 LLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPS 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQL 435
               + ++      IE  ++ER    + K F  AD IR++L
Sbjct: 405 AYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREEL 445


>gi|297380086|gb|ADI34973.1| cysteinyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 465

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 239/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMD 454


>gi|301117980|ref|XP_002906718.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108067|gb|EEY66119.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 688

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 129/368 (35%), Positives = 188/368 (51%), Gaps = 50/368 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN++ R  T F  +    +  Y+CGPTVYD  H+G+ R    FD + R+L  Y+G +
Sbjct: 35  LRLYNSMTRSKTAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGLE 94

Query: 65  CVTYVRNITDIDDKIIERAR-----QEHPSIPI----NDAISIITSKNTQQ--------- 106
            V  V NITDIDDKII RA      + +P   +    ++   ++    +QQ         
Sbjct: 95  -VELVMNITDIDDKIILRASETGWLEANPGKELPKDKDEKAKLVMEWASQQSAEDNMRRT 153

Query: 107 ----------FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
                     F++D   L    PT   R + ++P+++  ++ II +G AYE+N  + FDT
Sbjct: 154 RELSKFWEKSFLEDMAALNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAYESNGSVYFDT 213

Query: 157 SSIPN-----YGSFSRRKIDEQKM-----GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           ++        YG      + + ++     G     +  K+N +DF LWK+S   EP W S
Sbjct: 214 AAFGQSKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFWPS 273

Query: 207 PWGRGRPGWHIECSAMSS----HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           PWG GRPGWHIECSAM+S    H  G   D+H GG+DL FPHH+NEIAQS       +  
Sbjct: 274 PWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWV 333

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N ++H G LN+EG KMSKS  NF+ I E L              +R   L+  Y  P+D+
Sbjct: 334 NYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDNS-------PRQLRFLFLLHKYNVPMDY 386

Query: 323 TVQRLTEA 330
               + EA
Sbjct: 387 NDNSMDEA 394


>gi|195334248|ref|XP_002033796.1| GM20229 [Drosophila sechellia]
 gi|194125766|gb|EDW47809.1| GM20229 [Drosophila sechellia]
          Length = 558

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/391 (36%), Positives = 201/391 (51%), Gaps = 47/391 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYN   R+       +P  +  Y CGPTVYD AH+G+A   +  D+L R+LR Y+   
Sbjct: 48  INIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII+RA+     +   D   +  +   + F +D  RL   A   +  
Sbjct: 108 LVTAM-NITDVDDKIIKRAQ-----LAGLDWQKMARAYEAE-FRQDMLRLNVQAADVRSH 160

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T  +P +I  IQ +I    AY   +N + FD S   NYG      + E K+        
Sbjct: 161 VTTTMPVIIQFIQQLIAEKQAYVTPDNSVYFDVSKSKNYGKLQNLGLSEDKLDPI----- 215

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N ADF LWK R +  EP W +PWG  GRPGWHIECSA++  + G+  DIH GGLDL 
Sbjct: 216 -KRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDIHAGGLDLR 274

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQ C   + ++  N W+H G L++ G  +KMSKS GN I+++ELL       
Sbjct: 275 FPHHENEEAQCCARYKTDQWVNYWLHTGQLHMVGDAQKMSKSLGNTISVSELL------- 327

Query: 300 RSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + + A   R+A L+++YR  + +          T+QR    +  LS + Q      ++D 
Sbjct: 328 KKYTADEFRMACLLSNYRNAMPYSDQLMLTARQTLQRFKNFQADLSAYTQFLKPVHLLDE 387

Query: 350 AVLSA------------LYNDLNTVSAIQAL 368
             L A            L +D +T  AI  L
Sbjct: 388 GALKAQLTHTVTEFDNCLRDDFDTARAISVL 418


>gi|308063719|gb|ADO05606.1| cysteinyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 465

 Score =  225 bits (574), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 239/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFSRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADNIREELLKQKIALMD 454


>gi|298736162|ref|YP_003728688.1| Cysteinyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298355352|emb|CBI66224.1| Cysteinyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 465

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 156/472 (33%), Positives = 238/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKSKQKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + ++      IE  ++ER      K F  AD+IR++L  +   L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKAQKDFLKADHIREELLKQKIALMD 454


>gi|328876354|gb|EGG24717.1| cysteinyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 628

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/333 (41%), Positives = 192/333 (57%), Gaps = 23/333 (6%)

Query: 7   IYNTLERKITEF-QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           I N+L     EF  +    ++  Y+CGPTVYD +H+G+AR  I FDV+ R++R Y G   
Sbjct: 32  INNSLTMSKNEFVPSSGTKDVSWYICGPTVYDASHMGHARSYISFDVIRRIMRDYMGFN- 90

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           + YV NITDIDDKII RAR+   +       + ++      F +D   L  L P    R 
Sbjct: 91  IMYVMNITDIDDKIIIRARERGITH------TELSRACEASFFEDMKALNVLPPDALTRV 144

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQKM-----GT 177
           T +I +++  ++ II +G AYE+N  + FDT   S   +YG      +  +K+     G 
Sbjct: 145 TEYITEIVTFVEKIIENGFAYESNGSVYFDTVAYSKQHDYGKLDPNAVGNEKLNSEGEGA 204

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
                  K+N  DF LWK+S  +EP W SPWG GRPGWHIECSAM+S  LG   DIH GG
Sbjct: 205 LSAAVSEKRNNNDFALWKKSKELEPKWNSPWGEGRPGWHIECSAMASDILGPNIDIHSGG 264

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH+NEIAQS    + ++  N +IH+G L ++G KMSKS  NFITI E L  KK+
Sbjct: 265 EDLKFPHHDNEIAQSEAHYKCKQWINYFIHSGHLLIDGSKMSKSLKNFITIQEAL--KKY 322

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
             R      +R+  L+  Y +P++++V+ +T A
Sbjct: 323 TARQ-----MRMLFLIHKYDKPMNYSVESMTNA 350


>gi|194754415|ref|XP_001959490.1| GF12902 [Drosophila ananassae]
 gi|190620788|gb|EDV36312.1| GF12902 [Drosophila ananassae]
          Length = 559

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/391 (36%), Positives = 198/391 (50%), Gaps = 47/391 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYN   R+        P     Y CGPTVYD  H+G+A   +  D+L R+LR Y+   
Sbjct: 49  INIYNPGMRRKVPLILRSPHMATWYTCGPTVYDETHLGHASTYVKVDILQRILRDYFKIN 108

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII RA     S+   D + +      + F +D  RL    P  +  
Sbjct: 109 LVTAM-NITDVDDKIIMRA-----SLDGQDWLQLARDYEAE-FRRDMLRLNVKPPDVRSH 161

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+ +P +I  IQ +I   +AY  ++N + FD S    YG  ++  I+E+          
Sbjct: 162 VTSSMPVIIQFIQELIDDNYAYITSSNSVYFDVSKSKEYGKLAKVTIEEETSSN------ 215

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N ADF LWK R T  EP W++PWG  GRPGWHIECSA++  + G+  D H GGLDL 
Sbjct: 216 EKRNSADFALWKARKTQKEPSWQAPWGGEGRPGWHIECSAIAGLFFGRTVDFHAGGLDLR 275

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQ C   + ++  N W+H G L+L G  RKMSKS  N I++ ELL       
Sbjct: 276 FPHHENEEAQCCARYKTDQWVNYWLHTGQLHLTGDQRKMSKSLRNTISVEELL------- 328

Query: 300 RSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + + A   R+A L+++YR  + +          T+QR       LS + Q      ++D 
Sbjct: 329 KKYTADEFRMACLLSNYRNAMYYSDDLMQTARQTLQRFKNFHADLSAYVQFLKPVHLLDE 388

Query: 350 AVLSA------------LYNDLNTVSAIQAL 368
             L A            L +D +T  AI  +
Sbjct: 389 GALRAQLAHTMAEFDNSLRDDFDTSRAISVM 419


>gi|227537539|ref|ZP_03967588.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242676|gb|EEI92691.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 390

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/392 (37%), Positives = 201/392 (51%), Gaps = 41/392 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + +YNT+ RK  +F  I PS + MYVCGPTVY   H+GN R  + FD+++R L  +
Sbjct: 1   MENNLVLYNTISRKKEKFNPIHPSMVGMYVCGPTVYSDVHLGNCRTFVSFDLIFRYL-LH 59

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            G K V YVRNITD           DDK  ++A+ E    P+      I  K T  F  D
Sbjct: 60  LGYK-VRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE-PME-----IVQKYTIGF-HD 111

Query: 111 TTRL-ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFS 166
             RL   L P+ +P AT HI + I +I+ II +G+AYE N  + FD        +Y   +
Sbjct: 112 VLRLFNTLPPSIEPTATGHISEQIEMIKQIIDNGYAYEVNGTVYFDVEKYVQKYDYTVLT 171

Query: 167 RRKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            RK+++    TR +  +  KK   DF LW ++ P     W +PW  G PGWHIECSAMS+
Sbjct: 172 NRKLEDLLNNTRELGGQDEKKGRLDFALWIKAKPEHIMRWPAPWSTGFPGWHIECSAMSN 231

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL   HH NEIAQS   +     A  W+H   L + G +MSKS+GN
Sbjct: 232 KYLGAQFDIHGGGMDLAATHHTNEIAQSEACNHTSP-ARYWMHTNMLTVNGARMSKSSGN 290

Query: 285 FITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
                EL         R +    +R  ML  HYR  +DF+           +RL  A  L
Sbjct: 291 GFLPQELFTGNHPLLERGYSPMAVRFFMLQAHYRSTLDFSNEALDAADKGFKRLMNAIAL 350

Query: 334 LSKWPQTSTSKGI----IDPAVLSALYNDLNT 361
           L+K   +  + G     I     +A+ +D N+
Sbjct: 351 LNKITPSKATSGFNLEDIRKNCYAAMDDDFNS 382


>gi|298674878|ref|YP_003726628.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287866|gb|ADI73832.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 486

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/486 (32%), Positives = 231/486 (47%), Gaps = 59/486 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN+L  K+  F  +D   +RMY CGPTVY   HIGN R  ++ D+L R L     + 
Sbjct: 3   IKLYNSLTNKVESFIPVDDKFVRMYNCGPTVYGRVHIGNIRSFLMADLLKRFLNLEGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLACLAPT 120
            V    NITD+     +    E       D   +    I  K  Q F+ D  +L      
Sbjct: 62  -VRQAMNITDVGHMTSDSDEGEDKLQVAADKEKLDPWKIADKYKQLFIDDLNKLNIDDAD 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PRAT HI +MI +I+ +I +G+AY +   + FD +  P YG  S   +++ +   R  
Sbjct: 121 VYPRATQHINEMIEVIKKLIDNGYAYVSGGNVYFDITKFPEYGKLSGNVLEKLQSQERAV 180

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF------ 231
              +K+NP DF+LW   +  +     W+SPWG G PGWHIECSAM+  YL   F      
Sbjct: 181 YDPYKRNPQDFVLWFSHSKYKNHIMNWDSPWGEGYPGWHIECSAMALKYLTDAFNKHFDS 240

Query: 232 ------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
                 DIH GG D  FPHHE EIAQS  A   +K  N W+H   L +EG KMSKS  N 
Sbjct: 241 EKSTTIDIHTGGEDNKFPHHECEIAQSEGATG-QKFVNYWMHVTHLLVEGDKMSKSLNNI 299

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
            T+ ++L       + +    +R  +L THYR+ ++FT + L  ++  + +  +      
Sbjct: 300 YTLPDIL------NQGYKPEAVRYVLLTTHYRQKLNFTFKNLQASQNAIDRLQELIFNLK 353

Query: 340 -TSTSKGIIDPA---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
                 G  +            +  L NDLN   AI  L +  +  T N  L  I    A
Sbjct: 354 HIGNESGDFEAEKFAEKVKDDFIKELENDLNIAGAIGVLFEAVK--TINKSLTNIGQQEA 411

Query: 390 HILGIEVCKEHLNKNISI-----------AIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            IL +++ K+ ++K + +            I++L+++R      K F++AD IR  L+ +
Sbjct: 412 DIL-LDMLKD-VDKVLGVLDFSEQAPLEKEIQELIEQRDRARDSKDFATADKIRDNLKKR 469

Query: 439 GFILED 444
           G  L D
Sbjct: 470 GIHLID 475


>gi|188527712|ref|YP_001910399.1| cysteinyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|229558719|sp|B2UU37|SYC_HELPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188143952|gb|ACD48369.1| cysteinyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 465

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 159/472 (33%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADNIREELLKQKIALMD 454


>gi|317012690|gb|ADU83298.1| cysteinyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 465

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 155/463 (33%), Positives = 234/463 (50%), Gaps = 54/463 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVGMIETLLEKNFAYKVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 SDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGNLGEINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402

Query: 399 EHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQL 435
                 + ++      IE  ++ER    + K F  AD IR++L
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREEL 445


>gi|15645504|ref|NP_207679.1| cysteinyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2507427|sp|P41259|SYC_HELPY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2314022|gb|AAD07934.1| cysteinyl-tRNA synthetase (cysS) [Helicobacter pylori 26695]
          Length = 465

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/472 (33%), Positives = 239/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + ++      IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKERKDFLKADSIREELLKQKIALMD 454


>gi|76802853|ref|YP_330948.1| cysteine--tRNA ligase [Natronomonas pharaonis DSM 2160]
 gi|76558718|emb|CAI50311.1| cysteine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 497

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/355 (34%), Positives = 183/355 (51%), Gaps = 33/355 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL  +  EF+  DP N+ +Y CG TV D+AH+G+AR  +  DV++R L     + 
Sbjct: 3   LRVSNTLSGEREEFEPADPDNVLLYYCGLTVSDYAHLGHARTWVHVDVIHRWLEALGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+++KI+ R  +        D    + +    Q + D   L        PR
Sbjct: 62  -VRHVENITDVNEKIVARVGEPADGDTFGDDEGDVATHFIDQLLSDMRSLNLKRAEVYPR 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+P++I LI+ ++  G+AYE+N  + FD +    YG  S ++++  +      E+  
Sbjct: 121 VSEHVPEIIDLIETLVERGYAYESNGSVYFDVTEFEEYGKLSNQRLEAVEAQGPETEQAE 180

Query: 185 KKNPADFILWKRS--------------------TPMEPGWESPWGRGRPGWHIECSAMSS 224
           K++PADF LWK                      +P    W SPWG GRPGWHIECSAMS 
Sbjct: 181 KRHPADFALWKAGGVSESALEEHRDADCEYATESPAGQTWASPWGEGRPGWHIECSAMSM 240

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +L    DIH GG DL+FPHHENEIAQS  A   E+ A  W+H     ++  KMS S GN
Sbjct: 241 THLDDSIDIHMGGRDLVFPHHENEIAQSEAA-TGEQFARYWLHADLFQMDDEKMSSSLGN 299

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           FI ++E +   +FG        +R+  L   Y     ++   + EA   L +W +
Sbjct: 300 FIPVSEAV--ARFG-----VNPLRMFFLSASYNSTQTYSEAAIEEA---LERWDR 344


>gi|85057859|ref|YP_456775.1| cysteinyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|109894883|sp|Q2NIP7|SYC_AYWBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|84789964|gb|ABC65696.1| cysteinyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 438

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 156/460 (33%), Positives = 221/460 (48%), Gaps = 46/460 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L RK   F+   P  I +YVCGPTVY+  H+GN RP+I FD + R L     + 
Sbjct: 2   LQIYNSLTRKKEFFKPDHPPQINIYVCGPTVYNHLHLGNTRPLIFFDTVKRYLEMLKFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI-ITSKNTQQFVKDTTRLACLAPTHQP 123
            V YV NITDIDDKIIE + +       N  +   + +K  + F      L       +P
Sbjct: 61  -VYYVVNITDIDDKIIETSLK-------NQVLEKDLANKYIKSFNNLLETLNIQTINFKP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I  MI  IQ ++  G AY  +  I F  S I +YG   ++ + + K   R     
Sbjct: 113 QATQYINSMILYIQTLLDQGFAYFTDQGIYFRVSKITDYGKLKKQDLSQLKQNVRKQLDP 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DFILWK+ T     + SPW  GRPGWH EC+ M         DIHGGG DL FP
Sbjct: 173 QKEFPGDFILWKK-TSQGITYPSPWFAGRPGWHTECATMIEQLFKLPLDIHGGGTDLKFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +K AN ++H   L+ + +KMSKS GN I   +LL       + + 
Sbjct: 232 HHENEIAQT-HAHSHQKLANFFMHVERLDYQNQKMSKSLGNIIWCKDLL-------KQYN 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLSALYNDLN 360
             +I+  +L THYR+PI+F+   + + +    K     T       ++      L  D+ 
Sbjct: 284 PCIIKFLILSTHYRKPINFSYDLMEQTQQKYKKITYFLTKNNFYLKVNHFFCQTLDQDI- 342

Query: 361 TVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV---- 413
               +Q  H+L ++    H   DL+      AH   I         ++ + +  LV    
Sbjct: 343 ----MQLFHQLMQDDFATHKVIDLMEQIIKRAHQTQILDKLSQFQNSLLLILNTLVIAIP 398

Query: 414 ---------QERLI---LLKMKKFSSADYIRKQLESKGFI 441
                    Q   +     K + F  AD +RKQL  KGFI
Sbjct: 399 FNKPTKKDLQTYFLWQDARKCRDFIQADILRKQLLDKGFI 438


>gi|66475306|ref|XP_627469.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|32398684|emb|CAD98644.1| cysteinyl-tRNA-synthetase, possible [Cryptosporidium parvum]
 gi|46229332|gb|EAK90181.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|323508907|dbj|BAJ77346.1| cgd6_960 [Cryptosporidium parvum]
 gi|323510143|dbj|BAJ77965.1| cgd6_960 [Cryptosporidium parvum]
          Length = 581

 Score =  224 bits (572), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/342 (37%), Positives = 188/342 (54%), Gaps = 31/342 (9%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           N++    TEF  ++   +  Y CGPTVYD AH+G+AR  + FD++ R+L  Y+G   V  
Sbjct: 44  NSMTGGRTEFIPVNGRRVNWYACGPTVYDSAHLGHARNYVTFDIIRRVLEDYFGYD-VYL 102

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V NITDIDDKII+R+ ++     ++     +  +   +F  D   L    P    R +  
Sbjct: 103 VMNITDIDDKIIKRSNEQKRENFLD-----LAREFELEFFDDMKALNVKMPDVVTRVSEF 157

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKI--------DEQKM 175
           IP++I  I  II  G AYE+   + FD  S        YG    + +         E ++
Sbjct: 158 IPEIIDFISTIISRGFAYESEGSVYFDVESFRADEKHVYGRMEPKSVADVNRVLEGEGEL 217

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G  + +K   K+P DF LWK++ P EP W+SPWG+GRPGWHIECS M+S+ LG   DIH 
Sbjct: 218 GEHLKDK---KSPLDFALWKKAKPEEPCWDSPWGKGRPGWHIECSVMASNTLGFPIDIHS 274

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHH+NE+AQS       +  N ++H+G L++ G KMSKS  NF TI E+L+  
Sbjct: 275 GGIDLRFPHHDNELAQSEAHYDQAQWVNYFLHSGHLHIHGSKMSKSLKNFTTIQEILKEN 334

Query: 296 KFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
                   +P  IR+  L+  +  P++++ +   +  I + K
Sbjct: 335 --------SPRHIRMLFLLHKWDAPMNYSPETSLQEAIAVDK 368


>gi|156096861|ref|XP_001614464.1| cysteine -tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803338|gb|EDL44737.1| cysteine -tRNA ligase, putative [Plasmodium vivax]
          Length = 686

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/297 (42%), Positives = 173/297 (58%), Gaps = 18/297 (6%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           + N+L R   EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+    V
Sbjct: 117 VNNSLTRSKVEFVPQEKNQIKWYACGPTVYDAAHLGHARTYVSFDIIRRILVNYFKYD-V 175

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V NITDIDDKII+R+ +E  S       + +  K   +F +D  +L  L PT   R +
Sbjct: 176 FMVINITDIDDKIIKRSEEEKVSF------TELARKWECEFWEDMKKLNVLLPTAITRVS 229

Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGS--FSRRKIDEQKMGTRVPE-- 181
            ++ Q+I+ I+ II + +AY      + FD           ++R +    K  T++ E  
Sbjct: 230 EYVDQIIHYIEKIIDNKYAYVSEEGSVYFDIDEFKKSPKHFYARMEPLSVKDETKILEGE 289

Query: 182 ------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
                    KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V DIH 
Sbjct: 290 GDLGVISKKKKNAYDFALWKSSKPNEPYWDSPWGKGRPGWHIECSTMASNILGSVLDIHS 349

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +L
Sbjct: 350 GGVDLRFPHHDNELAQSEAFFDASQWVNYFLHSGHLHIEGLKMSKSLKNFITIKHML 406


>gi|317178758|dbj|BAJ56546.1| cysteinyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 465

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 240/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ S+    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKALKENKSVQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILKCMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKN 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMD 454


>gi|298710863|emb|CBJ26372.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 535

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/349 (36%), Positives = 185/349 (53%), Gaps = 31/349 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  + ++NT  R    F+  D   ++ Y CGPTVYD AHIGN R  + +DVL R L Y 
Sbjct: 15  VESGLMLFNTEGRTKERFRPQDRRRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQ 74

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V +V N+TD+DDKII R  ++  S+        +T K  + F  D   L  +  +
Sbjct: 75  GFE--VDHVCNLTDVDDKIIARMARDGVSL------EELTGKYAKLFFDDLESLNIVPAS 126

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PRAT HI  ++ ++Q +I    AY+ N  + F  S    YG+ +   +D   M     
Sbjct: 127 RYPRATEHIDDIVEMVQGLIDKELAYKVNGSVYFRVSKHGKYGTLA--CLDTSGMEDGAG 184

Query: 181 E----------KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYL 227
           E          +  K++  DF LWK   P E G   W++  G+GRPGWHIECSAM+  +L
Sbjct: 185 EGGGVNDAAEFESEKEDAKDFALWKGYKP-EDGEVFWDTLLGKGRPGWHIECSAMARKFL 243

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   D+H GG+DL+FPHHENE+AQS      +     W+HN F+N++G KMSKS GNF+T
Sbjct: 244 GDTLDVHAGGIDLVFPHHENEVAQSEGFTG-KPFCRCWVHNAFVNVDGEKMSKSKGNFLT 302

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           +   L T      +      R  ++ + YR  + F+++ L  A+  L +
Sbjct: 303 LKSTLAT------ALDVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRR 345


>gi|85374564|ref|YP_458626.1| cysteinyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787647|gb|ABC63829.1| cysteinyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 500

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/506 (33%), Positives = 239/506 (47%), Gaps = 89/506 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R + EFQ I P   R+Y CGPTVY++ HIGN R  I  D L R L +   + 
Sbjct: 6   LKLFNSLTRSLEEFQPIHPGEARVYTCGPTVYNYQHIGNMRAYIFADTLGRTLSWKGFD- 64

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            + +V NITD+          DDK+ + A +E  S         I     Q F  D  RL
Sbjct: 65  -LKHVINITDVGHLTSDADAGDDKMEKAAAREGKSA------WDIARYYQQVFEADLDRL 117

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P H PRAT+++  MI   ++I    H YE ++ + FD S++P YG  +R   DE +
Sbjct: 118 NIRKPEH-PRATDYVESMIAWAKSIEAK-HCYELDSGLYFDVSTVPEYGRLARAVTDEGE 175

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              R+ E   K+N ADF +W+++ P E     W+SPWG+G PGWH+ECS MS+  LG  F
Sbjct: 176 --GRIDEVEGKRNAADFAIWRKTPPGETRQMEWDSPWGKGAPGWHLECSVMSAELLGHPF 233

Query: 232 DIHGGGLDLIFPHHENEIAQ----SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           DIH GG+D    HH NEIAQ    +C  D     A IW+HN FL     KMSKS+G F+T
Sbjct: 234 DIHTGGIDHREIHHPNEIAQNQAHNCSPD---SGAKIWMHNNFLIDRRGKMSKSSGEFLT 290

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------- 336
           +  L++      R +     R+  L  HYR  ++FT + L  A + L +           
Sbjct: 291 LQALVD------RGFHPLAYRMLCLQAHYRSELEFTWEGLEAALVRLKRMVMALETLKAR 344

Query: 337 --------------WPQTST---------SKGIIDPAVL---SALYNDLNTVSAIQALHK 370
                         W Q              G + PA+    +A+ +DLNT  ++ A+  
Sbjct: 345 HAELVSASMPNSKPWAQMEAWTLKQVQGDDWGKLGPAIEKFGTAIADDLNTAISLTAMED 404

Query: 371 LARESTKNHD------LLPIFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLI 418
           L   +TK  D      L   F+A      + + +  L    + A      IE    ER  
Sbjct: 405 LL--ATKKIDPAKKLVLASAFDAVLGFDLLNLSRTDLRTRPATAEISEAEIEAAFAERKE 462

Query: 419 LLKMKKFSSADYIRKQLESKGFILED 444
               K F+ +D IR  L +KG  + D
Sbjct: 463 ARAAKDFARSDAIRDDLAAKGVEVMD 488


>gi|296188978|ref|XP_002742588.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           [Callithrix jacchus]
          Length = 565

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/400 (35%), Positives = 207/400 (51%), Gaps = 58/400 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 51  VQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFG-- 108

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   
Sbjct: 109 CNIVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYL 162

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ++  I+ II  GHAY  A   + FD  S  + YG      +         P 
Sbjct: 163 RVTENIPQIVSFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKL----VSVAPGPAGEPA 218

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P+DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL 
Sbjct: 219 DSDKRHPSDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLA 278

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ     + E+  N ++H+G L+++G+  KMSKS  N++TI + L+T     
Sbjct: 279 FPHHENEIAQCEVFHQCEQWGNYFLHSGHLHMKGKEEKMSKSLKNYVTIKDFLKT----- 333

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----------------------------E 331
             +   + RL  L + YR  ID++   + +A                            E
Sbjct: 334 --FSPDIFRLFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLASGSVRE 391

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           ++L  W + S++K     AV +AL +D +T S + A+  L
Sbjct: 392 VML--WERLSSTK----RAVRAALADDFDTPSVLDAILGL 425


>gi|284031725|ref|YP_003381656.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Kribbella flavida DSM 17836]
 gi|310947189|sp|D2PPT3|MSHC_KRIFD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|283811018|gb|ADB32857.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Kribbella flavida DSM 17836]
          Length = 406

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/404 (33%), Positives = 207/404 (51%), Gaps = 24/404 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++++Y+T    + E         RMYVCG T YD  H+G+A   + FD++ RL R    
Sbjct: 17  RRLRLYDTASGGLVEVPPGPDGPARMYVCGITPYDATHMGHAATYVTFDLVNRLWRD--A 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y +NITD+DD ++ERA      +   D    +  +  Q F  D T L  + P   
Sbjct: 75  GYTVHYTQNITDVDDPLLERATAT--GVEWTD----LAEREIQLFRDDMTALRVIPPQEY 128

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRV- 179
                 IP ++  I  +   G  Y+ + ++ F   + P +G  S    D  +   G R  
Sbjct: 129 VGVVESIPLVVERIAELQQAGAVYDVDGDLYFAVKADPAFGGISSYDADTMRTLFGERGG 188

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P++  K++P D ++W++  P EP W+SP+GRGRPGWHIECSA++  YLG   D+ GGG 
Sbjct: 189 DPDREGKRDPLDCLVWQQERPGEPAWDSPFGRGRPGWHIECSAIALQYLGMTIDVQGGGS 248

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHE   +++ CA      A  ++H   + L+G KMSKS GN +    L+  ++  
Sbjct: 249 DLIFPHHEMSASEAQCATGQHPFARAYVHQAMVGLDGEKMSKSKGNLV----LVSRERQA 304

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVL----S 353
           G    A  IRLA+L  HYR    +T   L +A+  L  W    T   G   PA +    +
Sbjct: 305 GSDPMA--IRLALLAHHYRTDWFWTDSELLDAQERLDVWRGAITRGTGPDGPAAVDALRA 362

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHILGIEV 396
           AL NDL+T +A+ A+ + A  +  + +   +   A   +LGI++
Sbjct: 363 ALTNDLDTTAALAAIDQWAETNGDDPEASALVALAVDALLGIKL 406


>gi|186701979|ref|ZP_02971607.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|186700745|gb|EDU19027.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 436

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 154/468 (32%), Positives = 228/468 (48%), Gaps = 63/468 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              YV NITDIDDKII  A        E      N+ + I  + NT + +          
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKELEVSEYYFNEYLKIKKALNTLEMI---------- 105

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               P+ + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R
Sbjct: 106 ---NPKVSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMR 162

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    +K NP DFILWK+ T     W +PWG GRPGWH ECS + + Y+G+   IHGGG+
Sbjct: 163 IESAANKHNPNDFILWKK-TNKGIMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGI 221

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL      
Sbjct: 222 DLKFPHHENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA----- 275

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
              +   V+R       Y++PI F+  + +  E EIL  K    +    +     L +L 
Sbjct: 276 --EYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNNQLKSLT 333

Query: 357 -------------NDLNTVSAIQALH-------KLARESTKNHDL---LPIFNASAHILG 393
                        +DL+ V  +  +H        L +E+   ++L   L        ILG
Sbjct: 334 QIDHFGLFDERINDDLDFVGIVDLIHISVKKINILIKENKDMNELKLNLTQLLYMLDILG 393

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           I     H +KN++     L+      +  K +  AD +RKQL + G +
Sbjct: 394 INFVDLHNDKNLA-----LLNTWKNYIDKKDYVKADELRKQLINIGIL 436


>gi|291456071|ref|ZP_06595461.1| cysteine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291382480|gb|EFE89998.1| cysteine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 549

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 163/529 (30%), Positives = 243/529 (45%), Gaps = 105/529 (19%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R  L+  Y
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+++A                     ++F +    L  L PT 
Sbjct: 89  ---KVTFVRNVTDIDDKILDKAAT------AGQRWWARAYYYEREFTEAYNTLGVLPPTV 139

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK----- 169
           +PRAT H+  MI LIQ I+ +GH Y       +    + FD +S P+YG  + +K     
Sbjct: 140 EPRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTAEV 199

Query: 170 ----IDEQKMGTRVP----EKYH----------KKNPADFILWKR---STPMEPGWESPW 208
                   +MG  V     +KY+          K +P DF LWK    + P +  W +P+
Sbjct: 200 DEAAAVADRMGPSVDATGDDKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPF 259

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+
Sbjct: 260 GVGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAAGY--PSAARWMHS 317

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            ++  +G KMSKS G  +++  +L        +W   V+R A+    YR  ++++ Q L 
Sbjct: 318 AWVTAKGEKMSKSLGTGLSVPSVLAENS----AW---VVRYALGSVQYRSMLEWSDQALV 370

Query: 329 EAE--------------ILLSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQA--- 367
           EA+              + L   P      GI    +    ++A+ +D+N   A  A   
Sbjct: 371 EAQAAYDRVSNFIERAGVALGGQPSREEVTGISADDLPTDFVAAMNDDVNVSGATAAIFT 430

Query: 368 --------LHKLARESTKN------HDLLPIFNASAHILGIEVCKEHLNKNIS------- 406
                   L +LA  +          + L    A    LG++   E      +       
Sbjct: 431 TIRSGNTLLSQLADRADSEAVQAEVRETLLAVRAMLDTLGLDPLAEPWVSAGAAGGASDG 490

Query: 407 -------IAIEKLVQERL----ILLKMKKFSSADYIRKQLESKGFILED 444
                   A+E L+ E+L       K + F+ AD IR  L   G  +ED
Sbjct: 491 TTETPEHAALEALITEQLNARAEARKARDFAKADQIRDTLAEAGITIED 539


>gi|86131788|ref|ZP_01050385.1| cysteine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|85817610|gb|EAQ38784.1| cysteine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 494

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 174/493 (35%), Positives = 251/493 (50%), Gaps = 66/493 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++ +YN+L  K   F  +    + MYVCGPTVY   H+GN R  + FD+++R L++  G
Sbjct: 7   QELTVYNSLSGKKEIFTPLLEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHL-G 65

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD           +DKI ++AR E    P+      +  K T  F     
Sbjct: 66  YK-VRYVRNITDAGHLTDDADQGEDKIAKKARLEQIE-PME-----VVQKYTLDFHDILN 118

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRK 169
           +   L P+ +P AT HI + I +I+ II +G+AYE N  + FD         YG  S RK
Sbjct: 119 KFNFLPPSIEPTATGHIIEQIEIIKKIIDNGYAYEKNGSVYFDVIKFNEDHEYGKLSGRK 178

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    TR +  +  K NP DF LWK++ P     W SPWG G PGWH+EC+AMS+ YL
Sbjct: 179 LEDMITNTRALSAQDEKNNPQDFALWKKAEPEHIMRWPSPWGDGFPGWHLECTAMSTKYL 238

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DL FPHHE EIAQ+  A   E     W+H   L L G+KM+KS GN I 
Sbjct: 239 GEQFDIHGGGMDLKFPHHECEIAQNEAAIGTEPV-KYWLHANMLTLNGQKMAKSTGNSIN 297

Query: 288 INELLETKKFGGRS------WPAPVIRLAMLMTHYREPIDFT----------VQRLTEAE 331
             E+     F G S      +   V R  +L + YR  +DF+            RL EA 
Sbjct: 298 PGEI-----FTGDSPHLTKGFAPSVARFFILQSSYRSIMDFSNDALLASEKGFNRLMEA- 351

Query: 332 ILLSKWPQTS--TSKGIID--PAVLSALYNDLNT-------VSAIQALH--KLARESTKN 378
           + ++K   TS  +S  + D   +  +A+ +D NT         A++ +H  K  + +   
Sbjct: 352 LKIAKNLDTSKESSFNVNDWKASCYAAMNDDFNTPILIAHLFDAVKQIHLIKDGKATITA 411

Query: 379 HD---LLPIFNASA-HILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
            D   LL   NA    +LG+E      +  +  +S  +E L++ R    + K F+ +D I
Sbjct: 412 SDLKLLLETINAFVFDVLGLEDNNAFAKADDSKLSGTVELLIKLRKEARENKDFALSDKI 471

Query: 432 RKQLESKGFILED 444
           R +L   G  L+D
Sbjct: 472 RDELIELGIQLKD 484


>gi|270001919|gb|EEZ98366.1| hypothetical protein TcasGA2_TC000823 [Tribolium castaneum]
          Length = 511

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/401 (35%), Positives = 203/401 (50%), Gaps = 55/401 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N   R        + + +  Y CGPTVYD +HIG+A   +  D++ RLLR+Y+   
Sbjct: 26  IKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKLDIIQRLLRHYFNLN 85

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT V NITDIDDKII RA      +P  +    +  K   +F KD   L    P    R
Sbjct: 86  VVT-VMNITDIDDKIIARANT--AKVPPKE----LAKKFEAEFWKDLDALDVRRPDCVLR 138

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-K 182
            T ++  +   I+ +I  G AY+A +N + FD  +  NY          Q +G   PE  
Sbjct: 139 VTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYDNYAKL-------QNIGEDAPEPS 191

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY----------LGKVFD 232
             KK+  DF LWK + P E  W S WG+GRPGWHIECSA++ H           LG   D
Sbjct: 192 KFKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHVLVPTIRNNTSLGPEID 251

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINEL 291
           IH GG+DL FPHHENE AQSC      +  N W+H G L+L + +KMSKS  N I+I+ +
Sbjct: 252 IHAGGIDLRFPHHENEEAQSCARYCRPQWVNYWLHTGHLHLKDSQKMSKSLHNTISISSM 311

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------- 337
           LE          AP  R+A LM+HYR  ++++ + +  A  +L  +              
Sbjct: 312 LEDT-------TAPAFRMACLMSHYRSRMEYSNEFVITASKVLQNYINFVDNCQNYLNGY 364

Query: 338 -----PQTSTSKGIIDPA--VLSALYNDLNTVSAIQALHKL 371
                   + SK +++ A  + SAL +D NT   I  +++L
Sbjct: 365 LKADVDNDTVSKLVVESANKIHSALIDDFNTSEVISTINEL 405


>gi|195485861|ref|XP_002091264.1| GE12334 [Drosophila yakuba]
 gi|194177365|gb|EDW90976.1| GE12334 [Drosophila yakuba]
          Length = 560

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/391 (36%), Positives = 202/391 (51%), Gaps = 45/391 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYN   R+       +P  +  Y CGPTVYD AH+G+A   +  D+L R+LR Y+   
Sbjct: 48  INIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII+RA+     +   D   +  +   + F +D +RL       +  
Sbjct: 108 LVTAM-NITDVDDKIIKRAQ-----LAGLDWQKMARAYEAE-FRQDMSRLNVQPADVRSH 160

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T  +P +I  IQ +I    AY   +N + FD S   NYG      + ++K+        
Sbjct: 161 VTTTMPVIIQFIQQLIDQKQAYVTPDNSVYFDVSKSQNYGKLENLGLSKEKL----ERGS 216

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N ADF LWK R +  EP WE+PWG  GRPGWHIECSA++  + G+  D H GGLDL 
Sbjct: 217 IKRNSADFALWKARKSGSEPTWEAPWGGEGRPGWHIECSAIAGLFFGRQLDFHAGGLDLR 276

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQ C   + ++  N W+H G L++ G  +KMSKS GN I+++ELL       
Sbjct: 277 FPHHENEEAQCCARYKTDQWVNYWLHTGQLHMVGDAQKMSKSLGNTISVSELL------- 329

Query: 300 RSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + + A   R+A L+++YR  + +          T+QR    +  LS + Q      ++D 
Sbjct: 330 KKYTADEFRMACLLSNYRNAMPYSDQLMVTARQTLQRFKNFQADLSAYTQFLKPVHLLDE 389

Query: 350 AVLSA------------LYNDLNTVSAIQAL 368
             L A            L +D +T  AI  L
Sbjct: 390 GALKAQLTYTVTEFDNCLRDDFDTARAISVL 420


>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
 gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
          Length = 466

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 107/217 (49%), Positives = 136/217 (62%), Gaps = 8/217 (3%)

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L CL PT +PR T HI  +I LI  II +GH Y    ++ F   S P Y   S RK+D+ 
Sbjct: 4   LQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKLDQN 63

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G RV     K+NPADF LWK +   EP WESPWG GRPGWHIECSAMS+HYLG VFDI
Sbjct: 64  RAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHVFDI 123

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG DLIFPHHENE+AQS  A   E     W+HNGF+N + +KMSKS  NF TI +++ 
Sbjct: 124 HGGGRDLIFPHHENELAQSRAA-YPESEVICWMHNGFVNKDDQKMSKSENNFFTIRDIIS 182

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
                   +    +R  ++ THYR  ++ + + + +A
Sbjct: 183 L-------YHPMALRYFLIRTHYRSDVNHSDKAIEKA 212


>gi|258570935|ref|XP_002544271.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237904541|gb|EEP78942.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 692

 Score =  224 bits (570), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/348 (37%), Positives = 186/348 (53%), Gaps = 38/348 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L RLLR Y+ 
Sbjct: 26  LKIWNSLTRSKVPFVPLDPEGRKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISI---ITSKNTQQFVKDTT 112
           +  V ++ NITD+DDK   +A        + H S    +  SI   +T +   +F+ D  
Sbjct: 85  KFDVRFIMNITDVDDKPDTKADVMLAYLDKLHGSSICGEDYSIFTKLTKRFEDRFMADAR 144

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRR--- 168
            L  +      R +  IP+++  ++ I+ H  AY   +  + FD ++    G+   R   
Sbjct: 145 ALNIIDADEVTRVSEFIPEIVSFVEQIVQHNFAYVTGDGSVYFDIAAFETVGNHYARLEP 204

Query: 169 ------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM 222
                  +     G  + +   K++ ADF LWK S P EP W SPWG GRPGWHIECSAM
Sbjct: 205 WNRNDTALQADGEGALINKSIEKRSKADFALWKASKPGEPSWPSPWGPGRPGWHIECSAM 264

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQS-------CCADRIEKTANIWIHNGFLNLEG 275
           +S  LGK  DIH GG+DL FPHH+NE+AQS       C  D+     N ++H G L+++G
Sbjct: 265 ASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW---VNYFLHMGHLSIQG 321

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            KMSKS  NF TI E LE   +  RS     +R+  LM  + + I+ T
Sbjct: 322 SKMSKSLKNFTTIREALERGDWTPRS-----LRIVFLMGSWADGIEIT 364


>gi|171920807|ref|ZP_02695358.2| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|225550663|ref|ZP_03771612.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903571|gb|EDT49860.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|225379817|gb|EEH02179.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 436

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 156/468 (33%), Positives = 228/468 (48%), Gaps = 63/468 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              YV NITDIDDKII  A        E      N+ + I  + NT + +          
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKELEVSEYYFNEYLKIKKALNTLEMI---------- 105

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               P+ + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R
Sbjct: 106 ---NPKVSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMR 162

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    +K NP DFILWK+ T     W +PWG GRPGWH ECS + + Y+G+   IHGGG+
Sbjct: 163 IESAANKHNPNDFILWKK-TNKGIMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGI 221

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL      
Sbjct: 222 DLKFPHHENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA----- 275

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEILLSK-----------WPQTSTSKG 345
              +   V+R       Y++PI F+  + +  E EIL  K           +     S  
Sbjct: 276 --EYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLT 333

Query: 346 IIDPAVL--SALYNDLNTVSAIQALH----KLARESTKNHDL------LPIFNASAHILG 393
            ID   L    + +DL+ V  +  +H    K+     KN D+      L        ILG
Sbjct: 334 QIDHFGLFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILG 393

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           I     H ++N++     L+      +  K +  AD +RKQL + G +
Sbjct: 394 INFVDLHNDENLA-----LLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|209554323|ref|YP_002284545.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|209541824|gb|ACI60053.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 436

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/468 (32%), Positives = 227/468 (48%), Gaps = 63/468 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              YV NITDIDDKII  A        E      N+ + I  + NT + +          
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKELEVSEYYFNEYLKIKKALNTLEMI---------- 105

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               P+ + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R
Sbjct: 106 ---NPKVSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMR 162

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    +K NP DFILWK+ T     W +PWG GRPGWH ECS + + Y+G+   IHGGG+
Sbjct: 163 IESAANKHNPNDFILWKK-TNKGIMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGI 221

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL      
Sbjct: 222 DLKFPHHENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA----- 275

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
              +   V+R       Y++PI F+  + +  E EIL  K    +    +     L +L 
Sbjct: 276 --EYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLT 333

Query: 357 -------------NDLNTVSAIQALH----KLARESTKNHDL------LPIFNASAHILG 393
                        +DL+ V  +  +H    K+     KN D+      L        ILG
Sbjct: 334 QIDHFGFFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILG 393

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           I     H ++N++     L+      +  K +  AD +RKQL + G +
Sbjct: 394 INFVDLHNDENLA-----LLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|185178726|ref|ZP_02964542.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024163|ref|ZP_02996889.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518554|ref|ZP_03004015.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225551139|ref|ZP_03772085.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209327|gb|EDU06370.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018795|gb|EDU56835.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997891|gb|EDU66988.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225378954|gb|EEH01319.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 436

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 156/468 (33%), Positives = 228/468 (48%), Gaps = 63/468 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              YV NITDIDDKII  A        E      N+ + I  + NT + +          
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKELEVSEYYFNEYLKIKKALNTLEMI---------- 105

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               P+ + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R
Sbjct: 106 ---NPKVSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMR 162

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    +K NP DFILWK+ T     W +PWG GRPGWH ECS + + Y+G+   IHGGG+
Sbjct: 163 IESAANKHNPNDFILWKK-TNKGIMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGI 221

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL      
Sbjct: 222 DLKFPHHENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA----- 275

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEILLSK-----------WPQTSTSKG 345
              +   V+R       Y++PI F+  + +  E EIL  K           +     S  
Sbjct: 276 --EYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLT 333

Query: 346 IIDPAVL--SALYNDLNTVSAIQALH----KLARESTKNHDL------LPIFNASAHILG 393
            ID   L    + +DL+ V  +  +H    K+     KN D+      L        ILG
Sbjct: 334 QIDHFRLFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILG 393

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           I     H ++N++     L+      +  K +  AD +RKQL + G +
Sbjct: 394 INFVDLHNDENLA-----LLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 420

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 106/216 (49%), Positives = 139/216 (64%), Gaps = 8/216 (3%)

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
            +L CL PT +PR T+HI  +I LI  I+ +G AY    ++ F   + P Y S S RK+D
Sbjct: 2   AQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLD 61

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
               G+RV     K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG VF
Sbjct: 62  HNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVF 121

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG DLIFPHHENE+AQS  A   E     W+HNGF+N + +KMSKS+ NF TI ++
Sbjct: 122 DIHGGGKDLIFPHHENELAQSRAA-YPESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDI 180

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           ++        +    +R  ++ THYR  ++ + + L
Sbjct: 181 IDL-------YHPMALRFFLMRTHYRGDVNHSDKAL 209


>gi|261839681|gb|ACX99446.1| cysteinyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 465

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 154/463 (33%), Positives = 234/463 (50%), Gaps = 54/463 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVSMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHNSSIEFSRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALRGEILANLKFIEELLGIGFKN 402

Query: 399 EHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQL 435
                 + ++      IE  ++ER    + K F  AD IR++L
Sbjct: 403 PSTYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREEL 445


>gi|237844837|ref|XP_002371716.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969380|gb|EEB04576.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 766

 Score =  223 bits (569), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/334 (38%), Positives = 185/334 (55%), Gaps = 34/334 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++  Y    
Sbjct: 109 LMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSDYLNYD 168

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN--TQQFVKDTTRLACLAPTHQ 122
            VT   NITDIDDKII+R+ ++         +  +T      ++F  D T L    PT  
Sbjct: 169 -VTMCMNITDIDDKIIKRSTEQ--------GVDFLTLARHWEKEFFNDMTALNVRLPTVV 219

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------------PNYGSFSRRKI 170
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +             P   S   R +
Sbjct: 220 TRVSEYIPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVL 279

Query: 171 D-EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           + E ++G    EK H   P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L  
Sbjct: 280 EGEGELGLTSSEKRH---PCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPF 336

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI 
Sbjct: 337 PLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIK 396

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           E L   +F  R      IRL  LM  +   ++++
Sbjct: 397 ECL--SRFTARQ-----IRLLCLMNRWDSFMNYS 423


>gi|294660604|ref|NP_853461.2| cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|187608843|sp|Q7NAH7|SYC_MYCGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|284812267|gb|AAP57029.2| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930959|gb|ADC30898.1| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 435

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 137/384 (35%), Positives = 206/384 (53%), Gaps = 36/384 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL +   +   ID + I +YVCGPTVYD  HIGN RP++ FDVL RLL +    K
Sbjct: 1   MKLYDTLTKTNVD---IDANEINIYVCGPTVYDHIHIGNLRPIVTFDVLRRLLEH--SNK 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TDIDDKII +A++      +N +   +T + T  + +    L    P    +
Sbjct: 56  KVNFVHNLTDIDDKIINQAQR------LNLSEEEVTKRYTSAYFEILDELNIKLPK-IVK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  +I  I+ I    +AYE + +I FDT+ I +YG  S+RK+DEQ  G RV    +
Sbjct: 109 VTDVMSGIIKYIEKIYDKQYAYELDGDIYFDTTRIADYGVLSKRKLDEQISGIRVKSNEN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS-AMSSHYLGKVFDIHGGGLDLIFP 243
           K +P DF+LWK+ T     W S +G GRPGWH EC+  +   +  K F IHGGG+DL+FP
Sbjct: 169 KTSPNDFVLWKK-TVEGIKWNSRFGLGRPGWHTECAYIIDQEFKQKGFVIHGGGIDLVFP 227

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+      +   N W+H G+L ++  KMSKS  NFI +  L+E+  +      
Sbjct: 228 HHENENAQNLALHN-KNLVNCWVHVGYLLIDNEKMSKSLNNFIYVKHLIESHNYRA---- 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------SKGIIDP 349
              IR     T + +P++F    +  A+  + K   T                S  ++  
Sbjct: 283 ---IRWVFYNTAHTQPLNFDGTIIKAAQKDVEKIISTVNRFRTFLIANKNNIPSSSLVCE 339

Query: 350 AVLSALYNDLNTVSAIQALHKLAR 373
               AL+++LN  +A + +  L +
Sbjct: 340 EFKKALFDNLNFANATKVIWDLIK 363


>gi|221481003|gb|EEE19417.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 684

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/334 (38%), Positives = 185/334 (55%), Gaps = 34/334 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++  Y    
Sbjct: 33  LMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSDYLNYD 92

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN--TQQFVKDTTRLACLAPTHQ 122
            VT   NITDIDDKII+R+ ++         +  +T      ++F  D T L    PT  
Sbjct: 93  -VTMCMNITDIDDKIIKRSTEQ--------GVDFLTLARHWEKEFFNDMTALNVRLPTVV 143

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------------PNYGSFSRRKI 170
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +             P   S   R +
Sbjct: 144 TRVSEYIPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVL 203

Query: 171 D-EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           + E ++G    EK H   P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L  
Sbjct: 204 EGEGELGLTSSEKRH---PCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPF 260

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI 
Sbjct: 261 PLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIK 320

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           E L   +F  R      IRL  LM  +   ++++
Sbjct: 321 ECL--SRFTARQ-----IRLLCLMNRWDSFMNYS 347


>gi|332673723|gb|AEE70540.1| cysteine--tRNA ligase [Helicobacter pylori 83]
          Length = 465

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 158/472 (33%), Positives = 239/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V E  
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQE-- 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             E+    +S +    IE  +++R    + K F  AD IR++L  +   L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEKRKRAKEQKDFLKADRIREELLKQKIALMD 454


>gi|198456470|ref|XP_001360335.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
 gi|198135626|gb|EAL24910.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
          Length = 556

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/340 (37%), Positives = 189/340 (55%), Gaps = 28/340 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN   R+       + + +  Y CGPTVYD AH+G+A   +  D++ R+LR Y+   
Sbjct: 48  IRVYNNGMRRKVPLILRNQNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQRILRNYFNIN 107

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII +AR         D + +  +   + F +D  RL    P  +  
Sbjct: 108 LVTAM-NITDVDDKIIRKARDSGC-----DWLGMARTYEAE-FKQDMLRLNVQPPDIRTH 160

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
            T+++P ++  I+ +I   HAY   +N + FD S  P+YG         Q++G    EK 
Sbjct: 161 VTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPHYGKL-------QRLGMSTEEKS 213

Query: 183 -YHKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK +    EP W +PWG  GRPGWHIECSA++  + G   D H GGLD
Sbjct: 214 DLFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAGFFFGHKLDFHAGGLD 273

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + ++  N W+H G L + G  +KMSKS GN I+I+E+L+    
Sbjct: 274 LRFPHHENEEAQCCVRYQTDQWVNYWMHTGQLYIAGDEQKMSKSLGNTISISEMLQ---- 329

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
              S+ +   R+A L+++YR  + ++ Q +  A   L ++
Sbjct: 330 ---SYTSDEFRMACLLSNYRNAMPYSEQLMLTARQTLQRF 366


>gi|171920288|ref|ZP_02691052.2| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902701|gb|EDT48990.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 436

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 181/337 (53%), Gaps = 35/337 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              YV NITDIDDKII  A        E      N+ + I  + NT + +          
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKELEVSEYYFNEYLKIKKALNTLEMI---------- 105

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               P+ + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R
Sbjct: 106 ---NPKVSTHMDKIIDYIQKLIYKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMR 162

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    +K NP DFILWK+ T     W +PWG GRPGWH ECS + + Y+G+   IHGGG+
Sbjct: 163 IESVANKHNPNDFILWKK-TNKGIMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGI 221

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL      
Sbjct: 222 DLKFPHHENENAQNQVLYN-KNLAKVWMHFGLVNVNNEKMSKSLNNFILVKDLLA----- 275

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEIL 333
              +   V+R       Y++PI F+  + +  E EIL
Sbjct: 276 --EYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEIL 310


>gi|317009539|gb|ADU80119.1| cysteinyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 465

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 155/470 (32%), Positives = 233/470 (49%), Gaps = 50/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K
Sbjct: 115 EYLDAMVSMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALANTPYQIDIHAGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPS 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + ++      IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 405 AYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMD 454


>gi|29290062|gb|AAO72326.1| cysteinyl tRNA synthetase [synthetic construct]
          Length = 465

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 154/470 (32%), Positives = 233/470 (49%), Gaps = 50/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCTFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPS 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               + ++      IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 405 AYFQLGVSESEKQEIENKIEERKRAKEQKIFLKADSIREELLKQKIALMD 454


>gi|257388228|ref|YP_003178001.1| cysteinyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257170535|gb|ACV48294.1| cysteinyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 494

 Score =  223 bits (568), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 236/501 (47%), Gaps = 74/501 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL  +   F+  DP ++ +Y CG T  D AH+G+AR  +  DV++R L +   + 
Sbjct: 3   LRVTNTLTGEREAFEPRDPDSVLLYYCGLTTSDPAHLGHARGWVHVDVMHRWLAHLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+++KI+ R  +        ++ + +     Q  + D   L        PR
Sbjct: 62  -VRHVENFTDVNEKIVARVGEN------GESEADVARHYVQSVIDDMRALNLRRAEVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+P+++ +++ +I  G+AYEAN  + FD ++   YG  S +++DE +      E+  
Sbjct: 115 VSEHVPEIVAMVETLIEKGYAYEANGSVYFDVTTFEEYGKLSNQQLDEIEAQGDPDEQSE 174

Query: 185 KKNPADFILWKR---------------STPMEPG------WESPWGRGRPGWHIECSAMS 223
           K+NPADF LWK                ++P E        W+SPW  GRPGWHIECSAMS
Sbjct: 175 KRNPADFALWKAGGVDPAAIEDHQHEGASPPEAACETAQTWDSPWSEGRPGWHIECSAMS 234

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           + +LG+  DIH GG DL+FPHHENEIAQS  A   ++ A  W+H   L  +G KMS S G
Sbjct: 235 TTHLGETIDIHVGGQDLVFPHHENEIAQSEAATG-QQFARHWLHVRLLETKGEKMSSSLG 293

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQ 339
           NF  +   ++        +   V+R  +L T Y     ++   + EA    E L   + +
Sbjct: 294 NFFAVEAAVD-------EYGTDVVRTFLLSTAYHNSAVYSEATIDEAIERWETLERGYER 346

Query: 340 TSTSKGIIDPAVL------------------SALYNDLNTVSAIQALHKLARESTKNHDL 381
              +   +D                      +A+ +D NT  A+ AL +L      + D 
Sbjct: 347 AVRACDDVDAYATVEDDTLRTAVTTAREHFETAMNDDFNTREALAALTELVGAVNVHVDE 406

Query: 382 LPIFNASAHILGIEVCKE------------HLNKNISIA---IEKLVQERLILLKMKKFS 426
              F+  A    +E  +E                ++S+A   +E L+  R        + 
Sbjct: 407 QSSFDYRALREAVETIEELGGGVLGLSFGGSEGGDVSVAEDLVELLLDVREAERAAGNYE 466

Query: 427 SADYIRKQLESKGFILEDYKN 447
            AD +R ++ES G  ++D  +
Sbjct: 467 RADELRDEVESLGVEVQDTDD 487


>gi|289064335|gb|ADC80543.1| cysteine aminoacyl-tRNA synthetase [Toxoplasma gondii]
          Length = 904

 Score =  223 bits (568), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/334 (38%), Positives = 185/334 (55%), Gaps = 34/334 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++  Y    
Sbjct: 247 LMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSDYLNYD 306

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN--TQQFVKDTTRLACLAPTHQ 122
            VT   NITDIDDKII+R+ ++         +  +T      ++F  D T L    PT  
Sbjct: 307 -VTMCMNITDIDDKIIKRSTEQ--------GVDFLTLARHWEKEFFNDMTALNVRLPTVV 357

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------------PNYGSFSRRKI 170
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +             P   S   R +
Sbjct: 358 TRVSEYIPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVL 417

Query: 171 D-EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           + E ++G    EK H   P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L  
Sbjct: 418 EGEGELGLTSSEKRH---PCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPF 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI 
Sbjct: 475 PLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIK 534

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           E L   +F  R      IRL  LM  +   ++++
Sbjct: 535 ECL--SRFTARQ-----IRLLCLMNRWDSFMNYS 561


>gi|300708706|ref|XP_002996527.1| hypothetical protein NCER_100366 [Nosema ceranae BRL01]
 gi|239605836|gb|EEQ82856.1| hypothetical protein NCER_100366 [Nosema ceranae BRL01]
          Length = 467

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 159/487 (32%), Positives = 246/487 (50%), Gaps = 74/487 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L +K+  F  IDP+N+++Y+CGPTVYD +HIG+AR  + FDV+  +L  Y+   
Sbjct: 2   LKIYNSLTKKLEIFNPIDPNNVKIYICGPTVYDHSHIGHARTYVSFDVIRNILEKYFNYN 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITDIDDKII ++++   S+        IT K T  F++D   L    PT   +
Sbjct: 62  -VTFVMNITDIDDKIINKSKETGMSM------KDITVKYTNLFLEDMALLNVRKPTVLTK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKMGTRVPE 181
            T ++ ++   ++ +  +G+AYE+N  + FD         Y  F    ++   +G   P 
Sbjct: 115 VTEYVDKIKEYVKILENNGYAYESNGSVYFDVMEYKKKFKYPIFREETVNN--LGDS-PN 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KK+P DF LWK+        ++ +G GRPGWHIECS M++  LG   DIH GG+DL 
Sbjct: 172 IQDKKSPLDFALWKK--------DNLFGSGRPGWHIECSVMANDVLGDYIDIHAGGVDLK 223

Query: 242 FPHHENEIAQSCCADRIEKT--ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ  C  R +K    N ++H G LN+ G KMSKS  NF TI  +LE      
Sbjct: 224 FPHHENEIAQ--CQARYQKKPWVNYFMHTGHLNINGLKMSKSLKNFTTIKSILE------ 275

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----------ILLSKWPQTSTSKGIIDP 349
           R  P   +R+  L   + + +++  +++  A+          + ++     S      D 
Sbjct: 276 RCTPIQ-LRILFLYHQWNKDMNYEEEQIKFAQNVEKKIFNFFMYVNSINNISKIYNKNDI 334

Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASA 389
            VL            +  N+ +T S I+AL +L   +    DL+                
Sbjct: 335 EVLDLISKTSKIVDVSFSNNFDTPSVIKALLELVSFTNSKLDLVSACTLYQVRDFVKRIL 394

Query: 390 HILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKK-------FSSADYIRKQLESKG 439
            ILGI   E  ++  ++N++  I   +    I + +KK       ++  D +R  L+  G
Sbjct: 395 DILGINKEEKVRDEDSENLAKLIN--IFRNKIRMALKKGVNKKDLYNICDEVRDNLKDLG 452

Query: 440 FILEDYK 446
           ++LED K
Sbjct: 453 YVLEDSK 459


>gi|13357680|ref|NP_077954.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761946|ref|YP_001752206.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508782|ref|ZP_02958248.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|24418701|sp|Q9PR21|SYC_UREPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|11271610|pir||H82930 cysteinyl-tRNA synthetase UU123 [imported] - Ureaplasma urealyticum
 gi|6899081|gb|AAF30529.1|AE002113_3 cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827523|gb|ACA32785.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675727|gb|EDT87632.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
          Length = 436

 Score =  223 bits (567), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 181/337 (53%), Gaps = 35/337 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              YV NITDIDDKII  A        E      N+ + I  + NT + +          
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKELEVSEYYFNEYLKIKKALNTLEMI---------- 105

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               P+ + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R
Sbjct: 106 ---NPKVSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMR 162

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    +K NP DFILWK+ T     W +PWG GRPGWH ECS + + Y+G+   IHGGG+
Sbjct: 163 IESAANKHNPNDFILWKK-TNKGIMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGI 221

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL      
Sbjct: 222 DLKFPHHENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA----- 275

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEIL 333
              +   V+R       Y++PI F+  + +  E EIL
Sbjct: 276 --EYDYQVVRWFFYQADYKQPIKFSHEIMKQNEKEIL 310


>gi|317182191|dbj|BAJ59975.1| cysteinyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 465

 Score =  223 bits (567), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 156/472 (33%), Positives = 237/472 (50%), Gaps = 54/472 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ S+    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKENKSVQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKY 183
            ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK 
Sbjct: 115 EYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKR 173

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 174 LEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP---- 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
            +L  + +DLN   A+  L  +     +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + ++      IE  ++ER    + K F  AD IR++L  +   L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMD 454


>gi|223996950|ref|XP_002288148.1| probable cysteinyl-trna synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220975256|gb|EED93584.1| probable cysteinyl-trna synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 474

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 240/494 (48%), Gaps = 72/494 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R  T F  +   ++ MY CGPTVYD AH+GN R  + +DVL R+L Y   + 
Sbjct: 1   LTLYNSLTRSKTPFTPLRSPSVSMYTCGPTVYDSAHVGNFRAFLTYDVLKRVLLYLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISII--TSKNTQQFVKDTTRLACLAPTHQ 122
            V +V N+TD+DDKII+R  +E         +S+I  T K   +F +D   L  +     
Sbjct: 60  -VDHVCNLTDVDDKIIKRCERE--------GVSLIELTRKFEGKFFEDLEALNIIKAREY 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQ-------K 174
           PRAT HI +M  LI ++  +G AY++      F  S    YG+   +   EQ       +
Sbjct: 111 PRATEHIDEMAKLILDLERNGLAYQSEEGSWYFSVSKKEGYGTRLVQLDPEQLKIGASAQ 170

Query: 175 MGTRVPEKY--HKKNPADFILWKRSTPMEPGWESPW---------GRGRPGWHIECSAMS 223
            G+   ++Y   K+   DF LWK   P     ++ W         GRGRPGWH+ECSAM+
Sbjct: 171 RGSLDADEYDTEKEGVRDFCLWKAYKPEFDREDATWDPDGVTRNIGRGRPGWHLECSAMA 230

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             YLG   D+H GG+DL FPHHENEIAQS  A+      N WIHNGF+N+   KMSKS G
Sbjct: 231 RKYLGDTIDLHAGGVDLKFPHHENEIAQSEGAN-CAPFCNCWIHNGFVNIGDEKMSKSKG 289

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEIL 333
           NF+T+     T             R  ++ + YR P+ FT          ++RL + + L
Sbjct: 290 NFLTLRGACPTAD------DVRAYRYLVVSSQYRNPLSFTDAALGAAKGALKRLDKVKTL 343

Query: 334 LSKWPQTST-SKGIIDPAVLS----ALYNDLNTVSAIQALHKLARESTK----------N 378
           L +  ++S  + G      L+    A+ +DL+   A   L  + + + K           
Sbjct: 344 LDEALESSNDNSGDASAEKLTNFEVAIADDLSMPRASACLFSIVKAAEKEFKRVDKAKDE 403

Query: 379 HDLLPIFNASAHILGIEVCKEHLNK-----NISIAIEKLVQERLILLKMKKFSSADYIRK 433
            D  P  +    ++G++  ++ L+       I   +  LV +R      K +  AD +R 
Sbjct: 404 DDNAPPLD----LVGLQRVRDALDLMDNVFEIPQDVMDLVVQRSAAKDAKDWDLADSLRT 459

Query: 434 QLESKGFILEDYKN 447
           ++   GF ++D K 
Sbjct: 460 RITELGFAVKDVKG 473


>gi|237750277|ref|ZP_04580757.1| cysteinyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229374171|gb|EEO24562.1| cysteinyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 499

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 161/520 (30%), Positives = 245/520 (47%), Gaps = 87/520 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++  R   +   ++ + IRMY+CGPTVYD AH+G+AR  I FD+L R L    G K
Sbjct: 1   MKVYDSKHRDKIDLVPLNSNEIRMYICGPTVYDDAHLGHARSAISFDLLARFLE-TKGYK 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +   +N TDIDDK+I ++ Q     P+N+    +      ++++D   L       +PR
Sbjct: 60  VIV-AKNFTDIDDKLINKSFQ--TKTPLNE----LAKHYIDKYLQDMEPLNVRRAHFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M   I++++    AY   N +I  + S   +YG+ SR  +D+     RV  + 
Sbjct: 113 ATEFLESMSNFIESLLQKDIAYRLPNGDICLEVSKDKSYGTLSRH-LDDTDSVHRVEVEE 171

Query: 184 HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLG---KVF--DIHGGG 237
            K++  DF+LWK      + G+ES  G+GRPGWHIECSAM    L    K F  DIH GG
Sbjct: 172 GKRDQRDFVLWKAYKGENDIGYESILGKGRPGWHIECSAMIDSVLAYKDKEFCIDIHAGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENE +Q+ C    E  A  W+HNGF+ + G KMSKS GN   I + L     
Sbjct: 232 QDLFFPHHENEASQTRCLHNKE-LAKYWLHNGFVTINGEKMSKSLGNSFFIKDAL----- 285

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------------WPQ 339
             + +   ++R  ++ THYR P+ F  + L +++  L K                   P 
Sbjct: 286 --KVYHGEILRNYLIGTHYRSPLHFNEEDLLQSKKRLDKIYRLKKRLDYEKDSIPKFLPF 343

Query: 340 TSTSKGI-----------------------IDPAVLSALYNDLNTVSAIQALHKLAREST 376
           ++ +  I                            L +L +DLN   A+  + +  +E+ 
Sbjct: 344 SNDTDSIKANEWEEFFKPYMSEILKQATKDFSEKFLESLSDDLNISLALSVIEEFIKEAN 403

Query: 377 KNHDLLP---IFNASAHI----------LGIEVCKEHLNKNIS----IAIEKLVQERLIL 419
           ++ D  P    + A A            LG     E+    +S    + IE L++ERL  
Sbjct: 404 EHLDTQPKDKAYKAQAKANLALIDFVLGLGTLSYSEYFQLGVSDEEKLKIETLIKERLEA 463

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +K F  AD IR  LE+ G  +      D  +  T W++
Sbjct: 464 KAVKDFVKADSIRNTLENMGISI-----MDKSKEHTEWEK 498


>gi|219115755|ref|XP_002178673.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410408|gb|EEC50338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 647

 Score =  222 bits (566), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 128/345 (37%), Positives = 192/345 (55%), Gaps = 33/345 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRM--YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ I N+L R+   F  +D S+ RM  Y+CGPTVY  +H+G+AR  + FD++ R+L  ++
Sbjct: 33  RLWITNSLTRQKEHFLTMDGSS-RMVWYMCGPTVYAPSHMGHARTYLGFDIIRRILERHF 91

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   VT V N+TDIDDKIIERA ++H           +  +   +F +D   L    PT 
Sbjct: 92  GYH-VTLVMNVTDIDDKIIERAAEQHV------GHLQLARRYEAEFHQDMADLGVAPPTT 144

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
             R T ++ ++   I NII  G AYE+N  + FD  +  +       K+  +++G     
Sbjct: 145 LTRVTEYMDEVTAYIANIIQRGFAYESNGSVYFDVQTFSDTPHMHYCKLAPEQVGNAELL 204

Query: 178 -----RVPEKY--HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
                ++ + +   K++P DF LWK++ P EP W+SPWG GRPGWHIECS M+S  L ++
Sbjct: 205 AEGEGKLTQDFVTDKQSPRDFALWKKTKPGEPSWDSPWGPGRPGWHIECSVMASDVLDRL 264

Query: 231 F-----DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
                 D+H GG+DL FPHH+NE+AQ+       +  N ++H G L+++G KMSKS  NF
Sbjct: 265 LQHRRMDLHSGGVDLKFPHHDNEMAQAEAECGETQWVNYFVHAGHLHIKGLKMSKSLKNF 324

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ITI + LE          A  IR+  L+  Y   +D+    +T A
Sbjct: 325 ITIQQALEINS-------ARQIRMLFLLHKYNAQMDYGDNTMTHA 362


>gi|307204345|gb|EFN83100.1| Cysteinyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 511

 Score =  222 bits (566), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 137/393 (34%), Positives = 205/393 (52%), Gaps = 47/393 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++ +YN + R          + ++ Y+CGPTVYD AHIG+A   I  D++ R+L  ++
Sbjct: 31  QTEVVVYNPVTRCKVPLILKTKNVLKWYMCGPTVYDSAHIGHATTYIKSDIIRRILTDHF 90

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V  V  ITDIDDKII+ A +             +  +   +F++D  RL    P  
Sbjct: 91  NID-VLLVMGITDIDDKIIKCALESKQDFKA------LARRFEMEFLEDMNRLNVREPYI 143

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             R T+++P++++ ++ +I  G+ Y   +  + FDT+    YG          K+    P
Sbjct: 144 YCRVTDYVPRIVHFVEKLIASGYGYILKDGSVYFDTNKYNRYG----------KISIPSP 193

Query: 181 EKYH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  H  KK+  DF LWK     EP WESPWGRGRPGWHIECSA++S   G   D+H GG+
Sbjct: 194 DATHPDKKSTLDFALWKAGKSDEPFWESPWGRGRPGWHIECSAIASAVFGNSIDVHSGGI 253

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKF 297
           DL FPHHENE AQSCC   +++  N W+H G L+L+G  KMSKS  N ++I + L+    
Sbjct: 254 DLAFPHHENEEAQSCCYHGVDQWVNYWLHCGHLHLKGDVKMSKSLRNTVSIRDYLD---- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSK---GII 347
               + A  +R   L++HYR  I+F+ + +  A       E  +S     +  K   G I
Sbjct: 310 ---KYSANQLRTLCLLSHYRNGIEFSDEVMQNAVSVTKKIENFISDSDTYTAGKLQAGEI 366

Query: 348 DPAVL---------SALYNDLNTVSAIQALHKL 371
           D  +L         SAL +D +T  A+ A+  L
Sbjct: 367 DENLLLTNTRSKVDSALADDFDTSRAMHAILNL 399


>gi|307181000|gb|EFN68774.1| Cysteinyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 518

 Score =  222 bits (566), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 136/370 (36%), Positives = 190/370 (51%), Gaps = 43/370 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           ++ Y+CGPTVYD AHIG+A   I  D++ R+L  Y+    +  V  ITDIDDKII+    
Sbjct: 58  LKWYMCGPTVYDSAHIGHAATYIKSDIIRRILSNYFNID-ILLVMGITDIDDKIIK---- 112

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              SI        ++     +F  D  +L    P    R T++IPQ+I+ ++ ++   + 
Sbjct: 113 --CSIESGKDFKTLSKHFETEFYADMNKLNIGEPYLYCRVTDYIPQIIHFVEELLTRNYG 170

Query: 146 Y-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           Y   +  + FDT+    YG       D  K  ++ P+K   K+  DF LWK +   EP W
Sbjct: 171 YITKDGSVYFDTNKYNKYGKLKTSVHDVVK--SQHPDK---KSALDFALWKAAKNNEPSW 225

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
             PWG GRPGWHIECSA++S   G   DIH GG+DL FPHHENE AQSCC   + +  N 
Sbjct: 226 RCPWGYGRPGWHIECSAIASAVFGNSVDIHSGGIDLAFPHHENEEAQSCCYHNVNQWVNY 285

Query: 265 WIHNGFLNLEGR-KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           W+H G LNL+G  KMSKS  N I+I   LE        + A  +R+  L++HYR  I+F+
Sbjct: 286 WLHCGHLNLKGDVKMSKSLKNTISIQNYLE-------EYSANHLRMLCLLSHYRNDIEFS 338

Query: 324 VQRLTEAEILLSKWPQ----------TSTSKGIIDPAVL------------SALYNDLNT 361
            + +  A ++  K+                 G ID  +L            SAL +D NT
Sbjct: 339 DEVMQNAVLVTQKFDNFINDCDNYVVGKFETGDIDENLLFTTLYDTRNKVYSALADDFNT 398

Query: 362 VSAIQALHKL 371
             AI A+  L
Sbjct: 399 SKAIHAIINL 408


>gi|300123539|emb|CBK24811.2| unnamed protein product [Blastocystis hominis]
          Length = 595

 Score =  222 bits (566), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/416 (33%), Positives = 206/416 (49%), Gaps = 63/416 (15%)

Query: 23  PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
           P  +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+    V +V NITDIDDKII+R
Sbjct: 3   PRKVLWYSCGPTVYDVAHMGHARTYLSQDIIMRILRDYFNYD-VQFVMNITDIDDKIIKR 61

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           + +    IP  +    +  K   +F++D   L C       R + ++ ++I +IQ II +
Sbjct: 62  STE--AGIPFTE----LARKYENEFMEDMKTLGCRTANVITRVSEYVDEIIEMIQGIINN 115

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG-TRVPE-------------KYHKKNP 188
           G+AYEAN  + FDT+S      + +       +  + VPE                K++P
Sbjct: 116 GYAYEANGSVYFDTTSFQKNHVYGKLSTAHAVLSLSLVPEMVGNVNTEEEQDFASEKRHP 175

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGGGLDLIFPH 244
            DF LWK S P EP W SPWG GRPGWHIECSAMS      +     D+H GG+DL  PH
Sbjct: 176 NDFALWKASKPGEPMWNSPWGAGRPGWHIECSAMSFSIFKTISDGRIDVHSGGVDLRLPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H NE+AQS       ++ N ++H G LN++G KMSKS  NFITI + L+        +  
Sbjct: 236 HTNEMAQSEAYMECSQSVNYFLHTGHLNIDGLKMSKSLKNFITIRQTLQ-------QFTP 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI------------------LLSKWPQTSTSKGI 346
             IR+  L+  +   ++++   + EA                    L +  PQ      +
Sbjct: 289 SQIRIYFLLHKWNTTMNYSDGAMEEARAKEKLFAEFFHNVKATLRQLTADQPQRWDDAEV 348

Query: 347 -----IDPA---VLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASA 389
                +D A   V + L +D +T  A++AL  L R       T  H + P+  + A
Sbjct: 349 QLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLETAKHIVAPLVLSCA 404


>gi|284165104|ref|YP_003403383.1| cysteinyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284014759|gb|ADB60710.1| cysteinyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 498

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/503 (28%), Positives = 238/503 (47%), Gaps = 77/503 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  +   F+  DP ++ +Y CG TV D  H+G+AR  +  DV++R L Y   + 
Sbjct: 3   LHVTNTLTGEKEPFEPRDPESVLLYYCGLTVSDPPHLGHARSWVHVDVMHRWLEYIGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TDI++KI+ R  ++     + +    +     ++ + D   L  L     PR
Sbjct: 62  -VRHVENFTDINEKIVARVGED----DLGEDELHVAETYIERTLADMRSLNLLRAEVYPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+P++I L++ ++  G+AYE+N  + FD +S   YG  S +++DE +      E+  
Sbjct: 117 VSEHVPEIIDLVETLVEEGYAYESNGSVYFDVTSFEEYGKLSNQELDEIESQGDPDERSE 176

Query: 185 KKNPADFILWKR---------------STPMEPG------WESPWGRGRPGWHIECSAMS 223
           K++PADF LWK                + P E        WESPWG GRPGWHIECSAMS
Sbjct: 177 KRHPADFALWKAGGVDESAIEEHRHEGAAPAEEACETSQTWESPWGEGRPGWHIECSAMS 236

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             +L +  DIH GG DL+FPHHENE+AQS  A   +  AN W+H     ++  KMS S G
Sbjct: 237 MTHLDETLDIHVGGRDLVFPHHENEVAQSEAA-TGQAFANYWLHCELFQMDDEKMSSSLG 295

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---- 339
           NF+T+++ ++        W   V+R  +    Y     ++ + + EAE    +W +    
Sbjct: 296 NFVTVDDAVD-------QWGTNVLRTFLTAGSYNSKQLYSDETIAEAE---ERWDRLERA 345

Query: 340 -TSTSKGIIDP--------------------AVLSALYNDLNTVSAIQALHKLARESTKN 378
             +  + +  P                    + ++A+ +D NT  A  AL  +A     +
Sbjct: 346 YEAAVEAVDSPDARTKVEDASFRDEIETARESFVAAMNDDFNTREAQSALLSVATAINAH 405

Query: 379 ------------HDLLPIFNASAHILGIEVCKEHLN-KNISIAIEKLVQE-RLILLKMKK 424
                        D + +      +LG+    E     +++  +  LV E R    +   
Sbjct: 406 LEDRAEYDYRGLRDAVDVLEELGAVLGLSFAGETTGTADLAGDVVDLVLEVREREREAGN 465

Query: 425 FSSADYIRKQLESKGFILEDYKN 447
           +  AD +R +L++ G  ++D  +
Sbjct: 466 YERADDLRDELQALGIEVQDTDD 488


>gi|109121280|ref|XP_001083935.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           isoform 3 [Macaca mulatta]
          Length = 563

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/332 (38%), Positives = 183/332 (55%), Gaps = 24/332 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 51  VQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFG-- 108

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   
Sbjct: 109 CNIVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYL 162

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II  GHAY  A   + FD  S  + YG      +    +G   P 
Sbjct: 163 RVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLV--GVVPGPVGE--PA 218

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL 
Sbjct: 219 DSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLA 278

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ     + E+  N ++H+G L+++G+  KMSKS  N+ITI + L+T     
Sbjct: 279 FPHHENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT----- 333

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +   V R   L + YR  ID++   +  A+
Sbjct: 334 --FSPDVFRFFCLRSSYRSAIDYSDSAMLHAQ 363


>gi|194883178|ref|XP_001975680.1| GG22443 [Drosophila erecta]
 gi|190658867|gb|EDV56080.1| GG22443 [Drosophila erecta]
          Length = 560

 Score =  222 bits (565), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/391 (36%), Positives = 199/391 (50%), Gaps = 45/391 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYN   R+       +P     Y CGPTVYD AH+G+A   +  D+L R+LR Y+   
Sbjct: 48  INIYNHGLRQKVPLILRNPQMATWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII+RA+     +   D   +  +   + F +D  RL       +  
Sbjct: 108 LVTAM-NITDVDDKIIKRAQ-----LAGLDWQKMARAYEAE-FRQDMLRLNVQPADVRSH 160

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T  +P +I  IQ +I    AY   +N + FD S   NYG      + E+K+        
Sbjct: 161 VTTTMPVIIQFIQQLIDEKQAYVTPDNSVYFDVSKSQNYGKLQNIGLSEEKL----ERGS 216

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N ADF LWK R +  EP W +PWG  GRPGWHIECSA++  + G+  D H GGLDL 
Sbjct: 217 IKRNSADFALWKARKSSGEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDFHAGGLDLR 276

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQ C   + E+  N W+H G L++ G  +KMSKS GN I+++ELL       
Sbjct: 277 FPHHENEEAQCCARYKTEQWVNYWLHTGQLHMVGDHQKMSKSLGNTISVSELL------- 329

Query: 300 RSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + + A   R+A L+++YR  + +          T+QR    +  LS + Q      ++D 
Sbjct: 330 KKYTADEFRMACLLSNYRNAMPYSDQLMLTARQTLQRFKNFQADLSAYTQFLKPIHLLDE 389

Query: 350 AVLSA------------LYNDLNTVSAIQAL 368
             L A            L +D +T  AI  L
Sbjct: 390 GALKAQLTHTVTELDNCLRDDFDTARAISVL 420


>gi|254779493|ref|YP_003057598.1| cysteinyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001404|emb|CAX29397.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Helicobacter pylori B38]
          Length = 465

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 151/461 (32%), Positives = 230/461 (49%), Gaps = 50/461 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+
Sbjct: 61  MLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K
Sbjct: 115 EYLDAMVCMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEK 172

Query: 186 KNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLD 239
           +   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG D
Sbjct: 173 RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFETLALANTPYQIDIHAGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I + L       
Sbjct: 233 LLFPHHENEACQTRCTFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AV 351
           +++   ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +
Sbjct: 285 KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEI 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  + +DLN   A+  L  +   + +  D           +L        +LGI      
Sbjct: 345 LECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPS 404

Query: 401 LNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQL 435
               + ++      IE  ++ER    + K F  AD IR++L
Sbjct: 405 AYFQLGVSESEKQEIESKIEERKRAKERKDFLKADSIREEL 445


>gi|73989537|ref|XP_534184.2| PREDICTED: similar to CG8257-PA [Canis familiaris]
          Length = 628

 Score =  221 bits (564), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/373 (37%), Positives = 205/373 (54%), Gaps = 44/373 (11%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           ++ +Y CGPTVYD AH+G+A   + FD++ R+L   +G   V  V  ITD+DDKII RA 
Sbjct: 137 DLLLYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGYN-VIMVMGITDVDDKIIHRAS 195

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +      +N + + + +   ++F +D   L  L PT   R T  IPQ+I  I+ II +GH
Sbjct: 196 E------MNVSPASLANLYEEEFKQDMAALKVLPPTVYVRVTETIPQIISFIEGIIANGH 249

Query: 145 AYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
           AY  A   + FD  S  + YG      +    +G   P    K++ +DF LWK + P E 
Sbjct: 250 AYSTAQGNVYFDLQSRGDKYGKLV--GVVPGPLGE--PVDSDKRHASDFALWKAAKPQEV 305

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPWG+GRPGWHIECS +SS   G   DIH GG+DL FPHHENEIAQ     + ++  
Sbjct: 306 FWASPWGKGRPGWHIECSTISSLVFGSQLDIHSGGVDLAFPHHENEIAQCEAFHQCKQWG 365

Query: 263 NIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
           N ++H+G L+++G+  KMSKS  N+ITI + L+T       +   V RL  + + YR  I
Sbjct: 366 NYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT-------FSPDVFRLFCMRSSYRAAI 418

Query: 321 DFTVQRLTEAEILL---SKWPQTSTS--KG--IIDP---------------AVLSALYND 358
           D++   + EA+ LL   + + + + +  KG  +  P               AV +AL +D
Sbjct: 419 DYSDGTMLEAKHLLLVVAAFVEDARAYMKGQLVCGPIRDDVLWERLCHTQEAVKAALADD 478

Query: 359 LNTVSAIQALHKL 371
            NT +A+ A+  L
Sbjct: 479 FNTPAAVDAIMDL 491


>gi|255513529|gb|EET89795.1| cysteinyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 482

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 165/490 (33%), Positives = 238/490 (48%), Gaps = 75/490 (15%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ IYNTL R + EF+      + M+VCG T YD AH+G+AR  IVFDV+ R LR+   +
Sbjct: 2   KLHIYNTLSRSVEEFKPRLEGKVDMFVCGQTPYDDAHLGHARNYIVFDVVVRWLRHLGYD 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIP----------INDAISIITSKNTQQFVKDTTR 113
             V Y++NITDI+DKII RA++   +            + D  +I   KN  Q++     
Sbjct: 62  --VRYIQNITDIEDKIINRAKERGITAEELERYYEKRFLEDMEAIGVKKNVTQYL----- 114

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
                     R+ ++I  M+  IQ ++  G+AY+ +++I +D     +Y   S  K+ EQ
Sbjct: 115 ----------RSHDYIDTMVMQIQMLLDGGYAYQIDSDIYYDVDKFVDYTKLSGMKL-EQ 163

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSAMSSH 225
               R+  +  K+N  DF LWK S P EP W+             GRPGWHIE +AM+  
Sbjct: 164 LKEHRIEPREGKRNVYDFALWKGSKPGEPSWKIKLRIGGNEIEFVGRPGWHIEDTAMTYA 223

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             G  +DIHGG  +LIFPHH NEIAQ+  A         W+H G LN+   KMSKS  NF
Sbjct: 224 VFGPQYDIHGGASELIFPHHSNEIAQAEAAFGKVPFVRYWMHAGVLNVNNIKMSKSLKNF 283

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------- 334
           ITI E+L         + A  +RL M+ THYR+ I++T + + EA+  L           
Sbjct: 284 ITIREIL-------GKYDAEALRLLMVSTHYRKEINYTERLIKEAQEKLDYMYNSMGVLY 336

Query: 335 -SKWPQTSTSKGIIDPAV-----LSALYN-DLNTVSAIQALHKL---------ARESTKN 378
            +K    +    + + AV        L N D NT  A+  L            +  S  +
Sbjct: 337 NAKEGNDAEGNDLAEKAVKLDSRFEELMNADFNTSVAVMELFGAFSDIRSYFESNRSIGH 396

Query: 379 HDLLPIFNA---SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ- 434
            +   ++ +    A  LG+     +       A+E L++ R  L   KKF  AD IR++ 
Sbjct: 397 SNKETVYKSLLKCAGALGLLESDAYKTGLEDEAME-LIKTREKLRVQKKFEDADRIRQEL 455

Query: 435 LESKGFILED 444
           LE  G  LED
Sbjct: 456 LEKYGLALED 465


>gi|148927563|ref|ZP_01811041.1| cysteinyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147887091|gb|EDK72581.1| cysteinyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 484

 Score =  221 bits (563), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 159/497 (31%), Positives = 240/497 (48%), Gaps = 75/497 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  RK+ EF  ++P  + +Y CGPTVYD+  +GN    I +D L R LR      
Sbjct: 2   LTLYNTPHRKLEEFTPVEPGKVSVYTCGPTVYDYLTVGNWIAYIRWDTLVRTLRA--NGL 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT+  NITD+          +DK+ + AR+E  +         I +  T  F++   +L
Sbjct: 60  AVTHAMNITDVGHLTSDEDHGEDKMQKGARREGKTA------WDIAAFYTNDFLEGMKQL 113

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L P H P+AT +IPQ + L++ +   G  Y+ ++ I FDTS  P Y  F+   +D  K
Sbjct: 114 NLLTPEHIPKATEYIPQQLELVRALKQKGFTYQIDDGIYFDTSKFPRYAQFAHLDLDALK 173

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWG--------RGRPGWHIECSAMS 223
            G RV     K++P+DF LWK + P E     W++P          +G PGWH+ECSAM+
Sbjct: 174 AGARVEHNAKKRSPSDFALWKFTQPGEIRDMEWDTPIDLLDEGEPRKGFPGWHLECSAMA 233

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-DRIEKTANIWIHNGFLNLEGRKMSKSN 282
               G   DIH GG+D I  HH NEIAQS  A D++   A  WIH   +  +G K+SKS 
Sbjct: 234 MDIFGPTLDIHAGGIDHIPVHHTNEIAQSEAATDKL--FARYWIHCNHIKADGTKISKSL 291

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS- 341
           GN  T+ + L T+ F    +     R   L +HYR   +FT + L  A+   + W + + 
Sbjct: 292 GNGYTLQD-LATRDFSPLDY-----RTFALQSHYRTEGNFTWENLEGAKNRRAHWREIAA 345

Query: 342 ----TSKGIIDPA-----------------VLSALYNDLNTVSAIQALHKLARESTKN-- 378
               T   ++D +                 +L AL +DLNT  A+Q + ++  E  K+  
Sbjct: 346 LRWQTYDTLVDDSEKTTDERTVQLINARQEILLALNDDLNTPLALQIIDEVFSELEKHRP 405

Query: 379 --------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
                    DLL   +    +LGI++       +IS   ++L+ ER    + K F  +D 
Sbjct: 406 VDIQQSALEDLLTFID---DVLGIKLLDS--TPDISDEAKQLILERQQAREAKDFKKSDE 460

Query: 431 IRKQLESKGFILEDYKN 447
           +R  L      L D ++
Sbjct: 461 LRDTLLKHNIGLRDTQS 477


>gi|50364902|ref|YP_053327.1| cysteinyl-tRNA synthetase [Mesoplasma florum L1]
 gi|61216193|sp|Q6F230|SYC_MESFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50363458|gb|AAT75443.1| cysteinyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 441

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 152/463 (32%), Positives = 231/463 (49%), Gaps = 48/463 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+++TL +   E + I+   I +Y CGPT+YD+ HIGNARP+I+ D L R L    G K
Sbjct: 1   MKLFDTLTQ---EQKNINKEVINIYSCGPTIYDYIHIGNARPIILMDTLIRFLE-SEGIK 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++NITDIDDKIIE+A QE      N     IT K    F+++   L    P     
Sbjct: 57  -VNFLQNITDIDDKIIEKAIQE------NKTEKEITDKYLSAFLQNLKDLKIRMPDKLIP 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            +  I +M   I +++    AY  + ++ FD     + YG  S +KI++   G RV  + 
Sbjct: 110 ISEKISEMNLFIDDLVKLEAAYNVDGDVYFDIQKFSDEYGKLSNKKINDLISGNRVEIED 169

Query: 184 HKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDL 240
            K NP DF +WK++   E G  ++S +G+GRPGWH EC+ +   Y  G+  DIH GG+DL
Sbjct: 170 KKNNPLDFSVWKKT---EKGITFDSNFGKGRPGWHTECALLIDEYFKGETIDIHSGGIDL 226

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE  Q   A   ++ ++IW+HNG L + G KMSKS GN +T+   L        
Sbjct: 227 QFPHHENERIQ-FIAKHGKEISDIWVHNGHLTINGEKMSKSLGNTMTLTNFL-------A 278

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------TSKGIID 348
           ++ + ++R   L T+Y++P++     + +A   + K    S                  D
Sbjct: 279 NYNSDILRWIFLTTYYKQPLNINDDLIEQANKFIQKINNLSKKIKQLLIENKFVKTNQFD 338

Query: 349 PAVLSA----LYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIEVCK 398
             ++      + NDLNT   +  L    ++  K        DL    N+  +IL      
Sbjct: 339 EEIIKQFKIHMKNDLNTSRVLTLLEDTLKDINKLSTLKEFDDLFLKINSLNYILKTLGLS 398

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            ++N  +S   + L      ++  K F  AD IRK L SKG +
Sbjct: 399 ININTFVSDEEQNLFLLWKKIVSEKDFEKADEIRKVLISKGIL 441


>gi|55378085|ref|YP_135935.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68052897|sp|Q5V2M3|SYC_HALMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55230810|gb|AAV46229.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 492

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/506 (30%), Positives = 244/506 (48%), Gaps = 85/506 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ NTL  +   F+  DP ++ +Y CG T  D  H+G+AR  +  DV+ R L Y   + 
Sbjct: 3   LRVTNTLTGEKEPFEPRDPDSVLLYYCGLTTSDPPHLGHARGWVHVDVMARWLDYLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+++KI+ R  ++       D+ + +     QQ + D   L        PR
Sbjct: 62  -VHHVENLTDVNEKIVARVGED------GDSEADVARHYVQQAIDDMRSLNLGRAEVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-QKMGTRVPEKY 183
            + H+P++I L++ +I  GHAYE N  + FD +S  +YG  S + +D+ +  G     + 
Sbjct: 115 VSEHVPEIIDLVERLIEQGHAYEQNGSVYFDVTSFEDYGKLSNQSVDDIESQGADT--EG 172

Query: 184 HKKNPADFILWK---------------RSTPMEPG------WESPWGRGRPGWHIECSAM 222
            K++PADF LWK                + P E        W+SPWG GRPGWHIECSAM
Sbjct: 173 EKRHPADFALWKAGGVDPADIAEHQHPEAAPAEEACQTAQIWDSPWGEGRPGWHIECSAM 232

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S  +L +  DIH GG DL+FPHHENE+AQS  A   ++ AN W+H   L  E  KMS S 
Sbjct: 233 SMTHLDESIDIHVGGQDLVFPHHENEVAQSEAA-TGKQFANYWLHVRLLETEEEKMSSSL 291

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS- 341
           GN+ T+ + +E  +FG       V+R  +L T Y     ++ + + EA+    +W + S 
Sbjct: 292 GNYFTVADAVE--EFG-----PDVLRTFLLSTAYTSRATYSDETIAEAK---ERWDRLSR 341

Query: 342 ------------------TSKGIIDP------AVLSALYNDLNTVSAIQALHKLAR---- 373
                             T + + D       A  +AL +D NT  A+ AL  L      
Sbjct: 342 GYERAVEACDDVDAHTKVTDETLRDAVEDARSAFEAALNDDFNTREAMTALLDLTAAVNT 401

Query: 374 --ESTKNHDLLPIFNA-------SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLK 421
             +    +D   +  A          ILG+    +  + ++S+A   ++ ++  R    +
Sbjct: 402 HVDGHDEYDYQGLRRAVETFEEFGGGILGLAFGDDD-SGDVSLAGDVVDLVLTVRQQERE 460

Query: 422 MKKFSSADYIRKQLESKGFILEDYKN 447
              +  AD +R +LE+ G  ++D  +
Sbjct: 461 AGNYERADELRDELEALGVEVQDTDD 486


>gi|217032936|ref|ZP_03438411.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
 gi|216945346|gb|EEC24018.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
          Length = 462

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 154/467 (32%), Positives = 234/467 (50%), Gaps = 54/467 (11%)

Query: 12  ERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           + K   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V  VRN
Sbjct: 5   QNKKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--VVLVRN 62

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
            TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++  
Sbjct: 63  FTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLDA 116

Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNP 188
           M+ +I+ ++    AY  +N +I  DTS   +YGS S     I+  ++G  V EK  ++  
Sbjct: 117 MVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ-- 173

Query: 189 ADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIF 242
            DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+F
Sbjct: 174 -DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L       +++
Sbjct: 233 PHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL-------KNY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AVLSA 354
              ++R  +L  HYR  ++F  + L  ++  L K      +   + G I+P     +L  
Sbjct: 285 DGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKKEILEC 344

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHLNK 403
           + +DLN   A+  L  +   + +  D           +L        +LGI         
Sbjct: 345 MQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPSAYF 404

Query: 404 NISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            + ++      IE  ++ER      K F  AD+IR++L  +   L D
Sbjct: 405 QLGVSESEKQEIENKIEERKRAKAQKDFLKADHIREELLKQKIALMD 451


>gi|54302905|ref|YP_132898.1| cysteinyl-tRNA synthetase CysS [Photobacterium profundum SS9]
 gi|61216516|sp|Q6LHY2|SYC2_PHOPR RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|46916329|emb|CAG23098.1| hypothetical cysteinyl-tRNA synthetase (cysS) [Photobacterium
           profundum SS9]
          Length = 457

 Score =  221 bits (562), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 156/465 (33%), Positives = 228/465 (49%), Gaps = 47/465 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +++T+ R++  F +I  + + +Y CGPTVYD+AH GN R  +  DVL R L     E
Sbjct: 5   ELLLFDTMARELRPFNSIRANKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLEINGYE 64

Query: 64  KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V +V NITD+          +DK+ + AR++      N +   I     Q F  D   
Sbjct: 65  --VNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAQFFEQAFFDDLKL 116

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L    P+   RAT HI + I  IQ +   G  Y+ ++ + F+T  + +YG  +R      
Sbjct: 117 LNISTPSVTCRATEHIQEQIKFIQELETKGFTYQTSDGVYFNTDRLADYGKLARLDKQGL 176

Query: 174 KMGTRVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           + G RV E   KK+P DF LWK S   P +  W+ PWG G PGWHIECSAM+  YLG VF
Sbjct: 177 EAGIRV-EMAEKKHPTDFALWKFSGDKPRQMEWQGPWGIGFPGWHIECSAMAEKYLGDVF 235

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG D I  HH NEIAQ C A      AN W+H  FL L+  K+SKS G  + ++ L
Sbjct: 236 DIHVGGEDHIPVHHTNEIAQ-CQAKNGHVQANYWLHGYFLQLKKEKISKS-GTSLRLDAL 293

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIID 348
           +       + +     R   L +HYR  + FT + L+ A+  L +         S G +D
Sbjct: 294 V------AKGYEPMAYRYLTLTSHYRSHLSFTWEGLSGAQKALHRLRNKVAFLPSNGNVD 347

Query: 349 PA----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-----HILGIEVCKE 399
            +     +  +  DLN   A+  +  +      N +LLP    +       ILG+++ K 
Sbjct: 348 ESYRELFMRHINRDLNMPQALALVWDVL-----NSELLPENKRATALFFDRILGLDIHKI 402

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                I   I +LV+ R  + +   F  AD IR Q+   G+ + D
Sbjct: 403 E-TVEIPEHISRLVELRTQVKRQGNFKKADAIRNQIHDLGYQVND 446


>gi|297242895|ref|ZP_06926833.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889106|gb|EFH27840.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 545

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/366 (36%), Positives = 191/366 (52%), Gaps = 55/366 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +YNT       F    P  + MYVCG TV    HIG+ R  I FD++ R +LR  Y
Sbjct: 18  ENLHLYNTASHSTNTFVPKKPGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY 77

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+++A +   +      I        ++F K    L  LAPT 
Sbjct: 78  K---VTFVRNVTDIDDKIMKKANESGQNWWERAYIY------EREFTKSYNTLGVLAPTV 128

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRKIDEQK 174
           +PRAT HI  M+ LI+ +I  GHAY  N+        + FD  S  +YG  + +  ++ +
Sbjct: 129 EPRATGHITDMVELIERLIERGHAYVINDSDGNPTGNVYFDVPSWEHYGELTHQNQNQNE 188

Query: 175 M------------GTRVPEKYH--------------KKNPADFILWKRSTPM---EPGWE 205
                        G  V    +              K +P DF LWK        +  W+
Sbjct: 189 TCADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWK 248

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           +P+G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A    ++A++W
Sbjct: 249 TPFGEGRPGWHIECSAMSHRYLGDDFDIHGGGLDLRFPHHENEMAQTRAAGW--ESADVW 306

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H+ ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q
Sbjct: 307 MHSAWVTAKGEKMSKSLGNGLSVPVVLANNS-------AWVVRYALGAVQYRAMLEWSDQ 359

Query: 326 RLTEAE 331
            L E++
Sbjct: 360 ALVESK 365


>gi|145547719|ref|XP_001459541.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427366|emb|CAK92144.1| unnamed protein product [Paramecium tetraurelia]
          Length = 668

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 191/335 (57%), Gaps = 23/335 (6%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+ N+L+  ++  F  I+   +  Y CGPTVY  +H+G+AR  +  DV+ R LR Y+  
Sbjct: 37  LKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLRDYFHY 96

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             ++ V NITDIDDKII  A     +    D +   T    + F      L    P    
Sbjct: 97  DLLS-VMNITDIDDKIITGA-----NAAKQDFLEF-TKVWEKDFFDAMEALNIELPDVIT 149

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-IPNYGSFSRRK-------IDEQKM 175
           R ++++P+++  IQ II +G+AYE+N  + F+    I +  ++ + +       + E + 
Sbjct: 150 RVSDYVPEIVTFIQKIISNGYAYESNGSVYFEVQKYIADGHTYPKMRPEVNAELLQEGEG 209

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
            ++V ++  KK+P DF LWK S P EP W+SPWG GRPGWHIECS M+S  LG   D+H 
Sbjct: 210 ESQVNKQSEKKSPYDFALWKASKPEEPKWQSPWGEGRPGWHIECSVMASAILGNPIDLHA 269

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL+FPHH+N +AQ+      E+  N +IH G LN+  RKMSKS  NF+TI E+L  K
Sbjct: 270 GGIDLLFPHHDNSLAQAEACFNCEQWINYFIHLGHLNIADRKMSKSLKNFMTIEEVL--K 327

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ++  R      +RL   +  Y  P +++ +++ +A
Sbjct: 328 RYTPRQ-----VRLNFAIHQYDAPQNYSEEQMEQA 357


>gi|327268009|ref|XP_003218791.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 686

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 132/335 (39%), Positives = 186/335 (55%), Gaps = 25/335 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+ YN+L +        +P  +  Y CGPTVYD AH+G+A   + FD++ R++   +G++
Sbjct: 159 IQTYNSLSKSKEPLVLRNPDVVTWYSCGPTVYDHAHLGHACSYVRFDIIRRIMTRLFGKE 218

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN--TQQFVKDTTRLACLAPTHQ 122
            V  V  ITDIDDKII+RA +          IS +T      + F +D   L  L PT  
Sbjct: 219 -VVMVMGITDIDDKIIKRANEM--------GISPLTLARFYEEDFKQDMAALKVLPPTVY 269

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVP 180
            R T +IPQ+I  IQ II   H Y  +   + FD  S    YG  +    D Q+     P
Sbjct: 270 MRVTENIPQIISFIQKIIASRHGYATSKGNVYFDVRSRGERYGKLANIYPDAQEE----P 325

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K +  DF LWK + P E  W+SPWG+GRPGWHIECS +SS   G   DIH GG+DL
Sbjct: 326 VDSDKSHVKDFALWKAAKPQEMCWDSPWGKGRPGWHIECSTISSLVFGGHLDIHTGGIDL 385

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELLETKKFGG 299
            FPHHENEIAQ     + ++ AN ++H+G L+++G  KMSKS  N+ITI + L  K+F  
Sbjct: 386 AFPHHENEIAQCEVYHQCDQWANYFLHSGHLHVKGSEKMSKSLKNYITIKDFL--KEFSS 443

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
             +     R+  L + YR  I+++   ++EA+ +L
Sbjct: 444 DQF-----RMLCLRSRYRAGIEYSDDHMSEAKSIL 473


>gi|67623595|ref|XP_668080.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis TU502]
 gi|54659275|gb|EAL37860.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis]
          Length = 425

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/338 (37%), Positives = 186/338 (55%), Gaps = 23/338 (6%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           N++    TEF  ++   +  Y CGPTVYD AH+G+AR  + FD++ R+L  Y+G   V  
Sbjct: 44  NSMTGGKTEFIPVNGRRVNWYACGPTVYDSAHLGHARNYVTFDIIRRVLEDYFGYD-VYL 102

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V NITDIDDKII+R+ ++     ++     +  +   +F  D   L    P    R +  
Sbjct: 103 VMNITDIDDKIIKRSNEQKRENFLD-----LAREFELEFFDDMKALNVKMPDVITRVSEF 157

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDE--QKMGTRVPE 181
           IP++I  I  II  G AYE+   + FD  S        YG    + + +  + +      
Sbjct: 158 IPEIIDFISTIISRGFAYESEGSVYFDVESFRADEKHVYGRMEPKSVADVNRLLEGEGEL 217

Query: 182 KYH---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             H   KK+P DF LWK++ P EP W+SPWG+GRPGWHIECS M+S+ LG   DIH GG+
Sbjct: 218 GEHLKDKKSPLDFALWKKAKPEEPCWDSPWGKGRPGWHIECSVMASNTLGFPIDIHSGGI 277

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHH+NE+AQS       +  N ++H+G L++ G KMSKS  NF TI E+L  K+  
Sbjct: 278 DLRFPHHDNELAQSEAHYDQAQWVNYFLHSGHLHIHGSKMSKSLKNFTTIQEIL--KENS 335

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
            R      IR+  L+  +  P++++ +   +  I + K
Sbjct: 336 PRH-----IRMLFLLHKWDAPMNYSPETSLQEAIAVDK 368


>gi|149635956|ref|XP_001514971.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 522

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 129/310 (41%), Positives = 177/310 (57%), Gaps = 22/310 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y CGPTVYD AH+G+A   + FD++ R+L   +G   VT V  ITDIDDKII+RA +   
Sbjct: 22  YSCGPTVYDHAHLGHACSYVRFDIIRRILTKIFGINLVT-VMGITDIDDKIIKRANE--- 77

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
              +N +   +     + F +D   L  L PT   R T +IPQ+I  I+ II +GHAY  
Sbjct: 78  ---LNISPIALARLYEEDFKEDMAALKVLPPTVYMRVTENIPQIISFIERIIANGHAYST 134

Query: 149 N-NEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           N   + FD  +  + YG+      D ++     P    K++P+DF LWK + P E  W S
Sbjct: 135 NQGNVYFDLKARGDKYGTLVGMTSDPREE----PADSDKRHPSDFALWKAAKPQEIFWTS 190

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECS +SS   G   DIH GG+DL FPHHENEIAQ     +  +  N ++
Sbjct: 191 PWGNGRPGWHIECSTISSLIFGSQLDIHSGGIDLAFPHHENEIAQCEVYHQCSQWGNYFL 250

Query: 267 HNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           H+G L+++G+  KMSKS  N+ITI + L  KKF    +     RL  +   YR  I+++ 
Sbjct: 251 HSGHLHVKGKEEKMSKSLKNYITIKDFL--KKFSPDEF-----RLFCMRGSYRSAIEYSE 303

Query: 325 QRLTEAEILL 334
             + EA+ LL
Sbjct: 304 DSMQEAKHLL 313


>gi|325120070|emb|CBZ55622.1| hypothetical protein NCLIV_060470 [Neospora caninum Liverpool]
          Length = 671

 Score =  220 bits (560), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 127/324 (39%), Positives = 177/324 (54%), Gaps = 34/324 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++  Y    
Sbjct: 12  LMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSDYLNYD 71

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN--TQQFVKDTTRLACLAPTHQ 122
            VT   NITDIDDKII+R+        I   +  +T      ++F  D   L    P+  
Sbjct: 72  -VTMCMNITDIDDKIIKRS--------IEQGVDFLTLARHWEKEFFNDMAALNVRLPSVV 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSF--------SRRK 169
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +        YG          SR  
Sbjct: 123 TRVSEYIPEVLSLIERIVKNGYGYESQGSVYFDTQTFRKTDKHIYGRMEPSSVSDESRVL 182

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
             E ++G    EK H   P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L  
Sbjct: 183 EGEGELGLTSSEKRH---PCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPF 239

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI 
Sbjct: 240 PLDIHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIK 299

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM 313
           E L   +F  R      IRL  LM
Sbjct: 300 ECL--SRFTARQ-----IRLLCLM 316


>gi|294791389|ref|ZP_06756546.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
 gi|294457860|gb|EFG26214.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
          Length = 589

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 135/390 (34%), Positives = 193/390 (49%), Gaps = 78/390 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++IY+T    I +F  I P    +YVCG TV    H+G+ R  + FD++ R L     
Sbjct: 21  QKVRIYDTARHAIVDFTTITPGKATIYVCGATVQSSPHVGHLRAGVAFDLIRRWLMKLGY 80

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN+TDIDDKI++++  +  +                +F K    L  L PT++
Sbjct: 81  E--VVFVRNVTDIDDKILDKSAAQGQNWWAR------AYYYEAEFTKAYHTLGVLNPTYE 132

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK------ 169
           PRAT HIP MI L+Q +I  GHAY         +  + FD  S   YG+ + ++      
Sbjct: 133 PRATGHIPDMINLVQRLIDRGHAYIIPNPDGSPSGNVYFDVPSWSQYGALTHQESGVSSG 192

Query: 170 -----------------------IDEQKMGTRVPE------------KYHKKNPAD---- 190
                                   D      R+ +            KY+  +PAD    
Sbjct: 193 QPDGETESGSLAEADSSEADSSEADSLAEAARIADAIAPSVDAPGNDKYNPTDPADQSER 252

Query: 191 ------FILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
                 F LWK S P +P    W++P+G GRPGWH+ECS MS  YLG  FDIHGGGLDL 
Sbjct: 253 KHDPRDFALWKASKPTDPPSARWQTPFGTGRPGWHLECSTMSRKYLGDDFDIHGGGLDLR 312

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS  A      A+ W+H+ ++  +G KMSKS GN ++I+ +L         
Sbjct: 313 FPHHENEMAQSRAAGW--GFAHYWMHSAWVTEKGEKMSKSLGNGLSIDSVLTHYS----P 366

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           W   ++R A++  HYR  +++  Q L EA+
Sbjct: 367 W---MVRYALVTVHYRSMLEWGDQTLEEAK 393


>gi|289739575|gb|ADD18535.1| cysteinyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 537

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 136/393 (34%), Positives = 207/393 (52%), Gaps = 41/393 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  ++IYN + ++   F   +   +  Y CGPTVYD  H+G+A   +  D+L R+LR++
Sbjct: 34  IETDLRIYNCVAKRNVPFILNNQYFVTWYTCGPTVYDSCHLGHASCYVKLDILQRILRHH 93

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    V+ + NITDIDDKII  A+ E+      D      +    +F  D  +L  L P 
Sbjct: 94  FNLNIVSAM-NITDIDDKII--AKSENLGKDWRDVARFYEA----EFWTDLKKLNVLEPN 146

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            + R T+HIP++I  I+ II    AY  + N +  D  S+ NYG      +DEQ    ++
Sbjct: 147 VKARVTDHIPKIINYIERIIKKRMAYVGDDNSVYMDVKSVKNYGKLQNISLDEQNAEEQL 206

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            EK  KK+P DF LWK +    P + SPWG GRP WHIECS ++    G    IH GG+D
Sbjct: 207 -EKGIKKSPMDFALWK-ARKTGPTFPSPWGDGRPAWHIECSTLAGMIFGDNVHIHAGGID 264

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENE  QSC     ++  N W+H G L+++G  +KMS S  N IT+ ++L  KK+
Sbjct: 265 LRFPHHENEECQSCVYHDNKQWVNYWLHTGHLSMKGESQKMSNSLKNTITVKDML--KKY 322

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKGI 346
            G  +     R+A  ++HYR  +D++ + +  A+  L+K+               T+ G+
Sbjct: 323 SGDDF-----RMACALSHYRNSMDYSDELMEMAKSNLNKFKGFRTDCLAYLSGKKTAVGL 377

Query: 347 IDPAVL-----------SALYNDLNTVSAIQAL 368
            D A+            S++ +D NT  +I  L
Sbjct: 378 DDSAIFENLKFAQSHIDSSIKDDFNTARSITTL 410


>gi|323495762|ref|ZP_08100832.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323319229|gb|EGA72170.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 456

 Score =  219 bits (559), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 153/459 (33%), Positives = 220/459 (47%), Gaps = 37/459 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T+ R+   FQ+I+ + + +Y CGPTVYD+AH GN R  +  D L R+L       
Sbjct: 6   LSLFDTMARQQRPFQSIENNTVGLYACGPTVYDYAHAGNLRTYLFVDTLRRVLSL--NGY 63

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V +V NITD+          +DK+ + AR++      N +   I       F+ D  +L
Sbjct: 64  QVNHVMNITDVGHLTSDADTGEDKMEKGARKQ------NKSAWEIAQYFEHAFLADLEQL 117

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             L PT   RAT HI + I  I  +   G  Y+  + + FDTS +  YG  +R      +
Sbjct: 118 NILTPTTICRATEHIQEQIDFIAQLEEKGFTYQTRDGLYFDTSKLAEYGQLARLDKTGLE 177

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            G RV +   KK   DF LWK S   E    W SPWG G PGWHIECSAM+  YLG+ FD
Sbjct: 178 AGIRV-DMAEKKLATDFALWKFSGEQERQMEWPSPWGVGFPGWHIECSAMAEKYLGEQFD 236

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG D I  HH NEIAQ C A      AN W+H  FL L   K+SKS G  + +  L+
Sbjct: 237 IHVGGEDHIPIHHTNEIAQ-CQAKNGRIQANYWLHGFFLQLNKEKISKS-GTSLRLEALI 294

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----SKWPQTSTSKGIID 348
           E      R +     R   L  HYR  + FT + L  A+  L    +K  + +    IID
Sbjct: 295 E------RGFEPLAYRYLTLTGHYRSHLSFTWESLQGAQTALKRLRNKVTKLADGGQIID 348

Query: 349 P---AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
                    +  DLN   A+  L ++      + D          I  +++      K +
Sbjct: 349 EYQQRFFQLINQDLNMPKALALLWEVLDSGYSSQDKKATALFFDQIFALDINHVEQEK-V 407

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              + +L  +RL + + K+F+ AD IR+Q+   G+ + D
Sbjct: 408 PEDVMQLALQRLAMKQQKRFAEADKIREQINQLGYQVAD 446


>gi|123477243|ref|XP_001321790.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121904623|gb|EAY09567.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 660

 Score =  219 bits (559), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 132/365 (36%), Positives = 190/365 (52%), Gaps = 27/365 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYN+L   I   +      +R Y CGPTVY  +H+G+AR  + FD++ R+L  Y+   
Sbjct: 11  IKIYNSLGANIVPLKREKGLPLRCYTCGPTVYSTSHLGHARTYLSFDMIRRILTDYFN-I 69

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ-FVKDTTRLACLAPTHQP 123
            V +  N+TDIDDKII                ++  S + ++ F  +   L    P    
Sbjct: 70  PVQWSMNVTDIDDKIINTFNGMSDDKKAKYGTALGYSADREKAFFAELDTLNIRRPDALL 129

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK-MGTRVPE- 181
           R +  IP++I  I N+     AYE+   + FD     + G F   +++ Q  +GT   E 
Sbjct: 130 RVSEVIPEIIEFISNLEEKSFAYESEGSVYFDVEKFEHDGRFVYAELERQSYLGTAKSEN 189

Query: 182 ----KYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
               +  K+N  DF LWK++ P E      WE+ WGRGRPGWHIECS MS  + G  FD+
Sbjct: 190 PEDMQEKKRNRNDFALWKKAKPEEEAAGQYWETKWGRGRPGWHIECSTMSGLFYGPQFDL 249

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANI--WIHNGFLN-LEGRKMSKSNGNFITINE 290
           H GG+DL FPHH NEIAQS    R EK   +  W+H G L    G KMSKS GNF ++ +
Sbjct: 250 HAGGIDLRFPHHSNEIAQSQA--RWEKVPWVRNWMHTGTLRAANGEKMSKSLGNFFSVQD 307

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                  G + W   V+R+    +HYR P+D +   +++A++ LSK     +S   I+P 
Sbjct: 308 -------GLQHWSPAVLRMIFCQSHYRNPMDLSEDNISQAQVKLSKITNFLSS---IEPL 357

Query: 351 VLSAL 355
            L ++
Sbjct: 358 TLKSI 362


>gi|103485844|ref|YP_615405.1| cysteinyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98975921|gb|ABF52072.1| cysteinyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 527

 Score =  219 bits (559), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 164/517 (31%), Positives = 246/517 (47%), Gaps = 92/517 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L R++  F+ + P   R+Y CGPTVY++ HIGN R  +  D L R L +  G K
Sbjct: 14  LRLFNSLTRRLETFEPVHPGEARVYSCGPTVYNYPHIGNMRAYVFADTLGRTLSFK-GYK 72

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP- 119
            +T+V NITD+    DD      + E  +     +I  I    T+ +  D   L    P 
Sbjct: 73  -LTHVINITDVGHLTDDADAGEDKLEKAAAEKAQSIWDIARHYTEAYWADVKALNIRGPM 131

Query: 120 -------THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
                   H   AT+++PQMI   + I    H YE ++ + FDTS++ +YG  +R   DE
Sbjct: 132 KAGKPEAAHWSIATDYVPQMIEFAKAIA-DKHCYELDSGLYFDTSTVADYGRLARHATDE 190

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
            +  +R+     K++PADF +W+++ P E     W+SPWG+G PGWH+ECS MS   LG 
Sbjct: 191 GE--SRIDPVDGKRHPADFAIWRKTPPGETRQMEWDSPWGKGAPGWHLECSVMSEALLGF 248

Query: 230 VFDIHGGGLDLIFPHHENEIAQ----SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            FDIH GG+D    HH NEIAQ    SC  D     A IW+HN FL     KMSKS G F
Sbjct: 249 PFDIHTGGIDHREIHHPNEIAQNQARSCSTD---SGARIWMHNNFLVERSGKMSKSAGEF 305

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT-----------------VQRLT 328
           + +  L++      + +     RL  L  HYR  ++F+                 VQR  
Sbjct: 306 LRLQLLID------KGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRLVMAVQRTK 359

Query: 329 EAEILLSKW---PQTSTSKGIIDPAVLS-------------------ALYNDLNTVSAIQ 366
           EA   LS+W    +   S G++D  + S                   A+ NDLNT SA  
Sbjct: 360 EAAT-LSEWKPFKKYLRSPGMVDDYIDSINETDEWFDFTGILGEFDDAISNDLNTASAFP 418

Query: 367 -----ALHKLARESTKN-----HDLLPIFNASAHILGIEVCK-EHLN-----KNISIA-- 408
                AL KL  E+  +      + L +      I G+ + + + ++     K  +I   
Sbjct: 419 TSEKLALTKLVEEAVTDPFIQLDNRLRLIATMDQIFGLRLLELDRIDLRIRPKTATITES 478

Query: 409 -IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            IE ++  R      K F+++D +R +L + G  + D
Sbjct: 479 EIEAILTRRKEARAAKDFATSDKLRDELIAAGVEVMD 515


>gi|146162816|ref|XP_001010154.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146146260|gb|EAR89909.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 716

 Score =  219 bits (558), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/351 (36%), Positives = 188/351 (53%), Gaps = 30/351 (8%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+ NTL  + + EF       +R Y CGPTVYD +HIG+AR  I  D++ R++  Y+G 
Sbjct: 71  LKVKNTLNPQNLVEFVPHKGKQVRFYNCGPTVYDSSHIGHARTYISADIIKRIMVKYFGY 130

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +  NITDIDDKII+++ +        +  +    K    + +D   L    P    
Sbjct: 131 D-VFHCMNITDIDDKIIKKSNES------GEEFTAFARKWEMDYWQDMETLNVDKPDVIV 183

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----------SSIPNYGSFSRRKIDE 172
           R + ++P++I  I+ II +G+AY AN  + F+            S +        +K+DE
Sbjct: 184 RVSEYVPEIISYIEKIIENGYAYVANGSVYFNVDKFHESPTHCYSKLEPQSVNDAQKLDE 243

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            +      ++  K++P DF LWK S P EP W+SPWG+GRPGWHIECS M+S  LG   D
Sbjct: 244 GEGALGKKDEKEKRSPRDFALWKASKPGEPFWDSPWGQGRPGWHIECSTMASEILGYPVD 303

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI----HNGFLNLEGRKMSKSNGNFITI 288
           IH GG DL FPHH+NE+AQS      +   N W+    H G L+++G KMSKS  NFITI
Sbjct: 304 IHMGGEDLKFPHHDNELAQSEAFYNKQDCQNQWVNYFMHTGHLHIDGLKMSKSLKNFITI 363

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
             L  + +   R     V+RL  +   Y   +D+T   + EA+    K+ +
Sbjct: 364 KHL--SSQHSQR-----VLRLLFMKQTYDSTMDYTTDSIHEAKTKDKKYSE 407


>gi|71026881|ref|XP_763084.1| cysteinyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350037|gb|EAN30801.1| cysteinyl-tRNA synthetase, putative [Theileria parva]
          Length = 659

 Score =  219 bits (557), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 125/318 (39%), Positives = 178/318 (55%), Gaps = 25/318 (7%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
            EF   +   ++ Y CGPTVYD AH+G+AR  I  D +  +L  Y     + +V NITD+
Sbjct: 80  VEFVPEEGRKVKWYTCGPTVYDVAHMGHARTYIACDTIRSILENYLNYD-LFFVENITDV 138

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DDKII+RA  E  S       S ++S   ++F  D   L    P    R ++++ +++  
Sbjct: 139 DDKIIQRALNEGKSY------SEVSSHWEREFWNDMLSLGVSLPDCITRVSDYMVEIVDF 192

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----------GTRVPEKYHK 185
           I+ I+ +G+AY ++  + FD  +  + G     K++              GT      +K
Sbjct: 193 IKKILDNGYAYVSDGSVYFDIEAFRSSGKHVYAKLEPTSFNDLNRILDAEGTLGEVSVNK 252

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPH 244
           K+ +DF LWK+S   EP W+SPWG+GRPGWHIECSAMS+   GK VFDIH GG+DL FPH
Sbjct: 253 KSKSDFALWKKSKVNEPSWDSPWGKGRPGWHIECSAMSTCIFGKEVFDIHSGGVDLRFPH 312

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NEIAQS       K AN ++H G L++ G KMSKS  NFI+I E+L   K+  R    
Sbjct: 313 HDNEIAQSEAYFDSNKWANYFLHFGHLHIHGLKMSKSLKNFISIKEML--TKYNKRQ--- 367

Query: 305 PVIRLAMLMTHYREPIDF 322
             IR+  L + Y   ++F
Sbjct: 368 --IRILFLNSRYDSTLNF 383


>gi|298711628|emb|CBJ32684.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 663

 Score =  219 bits (557), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/418 (33%), Positives = 209/418 (50%), Gaps = 64/418 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R  T F   D + +  Y+CGPTVY  +H+G+AR  + FD+L R++  ++G  
Sbjct: 40  LKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGYD 99

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V+   NITDIDDKII RA +   +         + +   + +++D   L   APT   R
Sbjct: 100 -VSLCMNITDIDDKIITRANEGGQNY------RELAAHFEEDYMQDMALLGVRAPTVVTR 152

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--VPE- 181
            +  IP+++  IQ II +G+AYE+N  + F+  S       +  K+  + +G    + E 
Sbjct: 153 VSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEG 212

Query: 182 -------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL----GKV 230
                     K++  DF LWKRS   EP W SPWG GRPGWHIECS M+S          
Sbjct: 213 EGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGT 272

Query: 231 FDIHGGGLDLIFPHHENEIAQS-----CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            DIH GG+DL FPHH+NE+AQ+     CC     +  N ++H G L+++G KMSKS  NF
Sbjct: 273 MDIHSGGVDLKFPHHDNEMAQAEAKYDCC-----QWVNYFLHTGHLHIKGFKMSKSLKNF 327

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF----------------------- 322
           ITI + L+             IRL  L+  Y  P+D+                       
Sbjct: 328 ITIKQALQENS-------PRQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVK 380

Query: 323 -TVQRLTEAEILLSKWPQTSTSKGIIDP--AVLSALYNDLNTVSAIQALHKLARESTK 377
             ++R T  +   +K P+ +    + D    V   L +D++T  A+ AL +L +   K
Sbjct: 381 AALRRTTARDPARTKEPELALMSSLSDAKKEVKKCLCDDVDTPGAMGALQELVKNVNK 438


>gi|111153388|emb|CAJ65144.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysS1) [Frankia
           alni ACN14a]
          Length = 458

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/274 (43%), Positives = 156/274 (56%), Gaps = 21/274 (7%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT V+N+TDIDDKII  A ++  S+        + ++ T+ F      +  L PT Q
Sbjct: 4   EHEVTLVQNVTDIDDKIIVNADRDGTSV------WELATRQTRAFDDAYRTIGILPPTIQ 57

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI LI  +I  GHAY     + F   S P YG+ S ++ D   M      +
Sbjct: 58  PRATGHIPEMIALISALIAGGHAYAGAGSVWFRVGSFPGYGALSHQRPD--SMLPSAESE 115

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 116 PGKADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVF 175

Query: 243 PHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           PHHENE AQ+ C          E+ A  W+H G L   G KMSKS GN + + + LE  +
Sbjct: 176 PHHENERAQTVCAAGGAAGAGAEEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALEAVR 235

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
                    V+R  +L  HYR  +++T + L E+
Sbjct: 236 -------PQVLRYHLLSAHYRSTLEYTPEALGES 262


>gi|269126521|ref|YP_003299891.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermomonospora curvata DSM 43183]
 gi|310947225|sp|D1A2Q5|MSHC_THECD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|268311479|gb|ACY97853.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermomonospora curvata DSM 43183]
          Length = 414

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/317 (37%), Positives = 172/317 (54%), Gaps = 22/317 (6%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           RMYVCG T YD  H+G+A   + FD++ R+ R   G   V YV+N+TD+DD ++ERA Q 
Sbjct: 44  RMYVCGITPYDATHLGHAATYLAFDLVNRVWRD--GGHKVCYVQNVTDVDDPLLERAEQ- 100

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                       +  +    F  D T L  L P H   A   IP ++ +I+ +   G  Y
Sbjct: 101 -----TGQDWRELADREIALFRDDMTALRILPPDHYVGAVEAIPLIVEMIERLRSRGAVY 155

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDE------QKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E N ++ F  S+ P++G  S    ++      ++ G   P++  KK+P D +LW+   P 
Sbjct: 156 EVNGDLYFPISADPDFGRVSGLTTEQMLPLFAERGGD--PQRRGKKDPLDALLWRAQRPG 213

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           EP WESP+G GRPGWH+ECSA+S H+LG  FD+ GGG DL FPHHE   + +  A     
Sbjct: 214 EPSWESPFGPGRPGWHVECSAISIHHLGMAFDVEGGGSDLAFPHHEMSASHAQVATGRHP 273

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  ++H G + L+G+KMSKS GN + ++ L   +  G        +RLA+L  HYR   
Sbjct: 274 HAKAYVHTGMVGLDGQKMSKSLGNLVFVSRL---RADGADPM---AVRLALLAHHYRSDW 327

Query: 321 DFTVQRLTEAEILLSKW 337
           ++T + L  A   L +W
Sbjct: 328 EWTGEDLPRATARLERW 344


>gi|148553156|ref|YP_001260738.1| cysteinyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498346|gb|ABQ66600.1| cysteinyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 510

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/346 (38%), Positives = 177/346 (51%), Gaps = 30/346 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++++L R    F  IDP+ +R+Y CGPTVY+FAH+GN R  +  D L R L +     
Sbjct: 11  LMLFDSLTRSTRAFAPIDPAMVRLYSCGPTVYNFAHLGNLRAYVFTDTLRRTLNWK--GW 68

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V +V NITD+          DDK+      E  +      I  I +  T  F  D   L
Sbjct: 69  PVNHVINITDVGHLTSDADEGDDKM------EAAAKKAARTIWEIAAFYTDAFKADLRDL 122

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             +APT    AT+HI  MI   + I   G +YE +  + FDTS +P+YG  +  + DE  
Sbjct: 123 NIIAPTLWSVATDHIQDMIAFARTIEAAGASYELDGGLYFDTSKVPDYGRLAGARGDETV 182

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              R+ E   K+N ADF LW+RS   E     W SPWG G PGWH+ECS MS  YLG  F
Sbjct: 183 --GRIAEVEGKRNAADFALWRRSATGEQRQMEWMSPWGPGAPGWHLECSVMSMKYLGSQF 240

Query: 232 DIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           DIH GG+D    HH NEIAQ+          AN W+HN FL   G KMSKS G F T+  
Sbjct: 241 DIHTGGIDHREIHHCNEIAQNQAFTGTAASGANFWMHNNFLVDRGGKMSKSKGGFATLAG 300

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           +++      +       RL  L  HYR  ++F+ + L  A   L++
Sbjct: 301 VID------KGVHPLAYRLLCLSAHYRSELEFSPEALASALTRLTR 340


>gi|260753260|ref|YP_003226153.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552623|gb|ACV75569.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 516

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 164/505 (32%), Positives = 238/505 (47%), Gaps = 75/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  +N+L +KI  F  IDP  +R+Y CGPTVY+FAH+GN R  +  D L R+L +     
Sbjct: 8   VLFFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWK--GY 65

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V +V NITD+     D      + E  +      I  +    T+ F  D   L    PT
Sbjct: 66  PVNHVINITDVGHLTSDSDTGDDKMEAAAHKAQKTIWDVARFYTEAFWSDLKNLNIFNPT 125

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
               AT+HI  MI   + I   G  Y+ ++ + FDTS +  YG  +  +  E +   R+ 
Sbjct: 126 IWSIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGVGRIE 183

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KK+PADF LW+RS+P E     W SPWG G PGWH+ECS MS  YLG+ FDIH GG
Sbjct: 184 TVAGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDIHTGG 243

Query: 238 LDLIFPHHENEIA--QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           +D    HH NEIA  Q+   D+ +  AN W+HN FL     KMSKS G+F+T++ L+E  
Sbjct: 244 IDHREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTLIEAG 303

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA--------------- 330
                       R+  L  HYR  ++F+          ++RL  A               
Sbjct: 304 IH------PLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKKVVAD 357

Query: 331 ----------EILLSKWPQTSTSKGIIDP-------AVL----SALYNDLNTVSAIQALH 369
                     E   SK       +G+I+        A+L     A+ NDL    A+  L 
Sbjct: 358 GEPDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILERFDQAVSNDLMLPQALPLLE 417

Query: 370 K-LARESTKNHDLLPIFNASAHILGIEVC---KEHLN---KNISIA---IEKLVQERLIL 419
           + L  +  +  + L +  +   ILG+ +    +  LN   KN S+    +  L++ER + 
Sbjct: 418 ETLGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLALLEERQLK 477

Query: 420 LKMKKFSSADYIRKQLESKGFILED 444
            K K F+++D IR +L   G  + D
Sbjct: 478 RKEKDFAASDAIRDRLSEAGIDVLD 502


>gi|56551082|ref|YP_161921.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|61216128|sp|Q5NR44|SYC_ZYMMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56542656|gb|AAV88810.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 516

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 164/505 (32%), Positives = 238/505 (47%), Gaps = 75/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  +N+L +KI  F  IDP  +R+Y CGPTVY+FAH+GN R  +  D L R+L +     
Sbjct: 8   VLFFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWK--GY 65

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V +V NITD+     D      + E  +      I  +    T+ F  D   L    PT
Sbjct: 66  PVNHVINITDVGHLTSDSDTGDDKMEAAAHKAQKTIWDVARFYTEAFWSDLKNLNIFNPT 125

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
               AT+HI  MI   + I   G  Y+ ++ + FDTS +  YG  +  +  E +   R+ 
Sbjct: 126 IWSIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGVGRIE 183

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KK+PADF LW+RS+P E     W SPWG G PGWH+ECS MS  YLG+ FDIH GG
Sbjct: 184 TVAGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDIHTGG 243

Query: 238 LDLIFPHHENEIA--QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           +D    HH NEIA  Q+   D+ +  AN W+HN FL     KMSKS G+F+T++ L+E  
Sbjct: 244 IDHREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTLIEAG 303

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA--------------- 330
                       R+  L  HYR  ++F+          ++RL  A               
Sbjct: 304 IH------PLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKKVVAD 357

Query: 331 ----------EILLSKWPQTSTSKGIIDP-------AVL----SALYNDLNTVSAIQALH 369
                     E   SK       +G+I+        A+L     A+ NDL    A+  L 
Sbjct: 358 GEPDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILERFDQAVSNDLMLPQALPLLE 417

Query: 370 K-LARESTKNHDLLPIFNASAHILGIEVC---KEHLN---KNISIA---IEKLVQERLIL 419
           + L  +  +  + L +  +   ILG+ +    +  LN   KN S+    +  L++ER + 
Sbjct: 418 ETLGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLALLEERQLK 477

Query: 420 LKMKKFSSADYIRKQLESKGFILED 444
            K K F+++D IR +L   G  + D
Sbjct: 478 RKEKDFAASDAIRNRLSEAGIDVLD 502


>gi|241761347|ref|ZP_04759435.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374254|gb|EER63751.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 516

 Score =  218 bits (556), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 164/505 (32%), Positives = 238/505 (47%), Gaps = 75/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  +N+L +KI  F  IDP  +R+Y CGPTVY+FAH+GN R  +  D L R+L +     
Sbjct: 8   VLFFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNW--KGY 65

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V +V NITD+     D      + E  +      I  +    T+ F  D   L    PT
Sbjct: 66  PVNHVINITDVGHLTSDSDTGDDKMEAAAHKAQKTIWDVARFYTEAFWSDLKNLNIFNPT 125

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
               AT+HI  MI   + I   G  Y+ ++ + FDTS +  YG  +  +  E +   R+ 
Sbjct: 126 IWSIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGVGRIE 183

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KK+PADF LW+RS+P E     W SPWG G PGWH+ECS MS  YLG+ FDIH GG
Sbjct: 184 TVAGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDIHTGG 243

Query: 238 LDLIFPHHENEIA--QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           +D    HH NEIA  Q+   D+ +  AN W+HN FL     KMSKS G+F+T++ L+E  
Sbjct: 244 IDHREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTLIEAG 303

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA--------------- 330
                       R+  L  HYR  ++F+          ++RL  A               
Sbjct: 304 IH------PLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKKVVAD 357

Query: 331 ----------EILLSKWPQTSTSKGIIDP-------AVLS----ALYNDLNTVSAIQALH 369
                     E   SK       +G+I+        A+L     A+ NDL    A+  L 
Sbjct: 358 GEPDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILELFDLAVSNDLMLPQALPLLE 417

Query: 370 K-LARESTKNHDLLPIFNASAHILGIEVC---KEHLN---KNISIA---IEKLVQERLIL 419
           + L  +  +  + L +  +   ILG+ +    +  LN   KN S+    +  L++ER + 
Sbjct: 418 ETLGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLDLLEERQLK 477

Query: 420 LKMKKFSSADYIRKQLESKGFILED 444
            K K F+++D IR +L   G  + D
Sbjct: 478 RKEKDFAASDAIRDRLSEAGIDVLD 502


>gi|300711054|ref|YP_003736868.1| cysteinyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299124737|gb|ADJ15076.1| cysteinyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 495

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 149/494 (30%), Positives = 233/494 (47%), Gaps = 69/494 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  +  EF+      + +YVCG TV D AH+G+AR  +  DV+ R L +     
Sbjct: 2   LSVTNTLSDEREEFRPT-GDEVLVYVCGLTVSDDAHLGHARVWVHADVMCRWLSHEG--H 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+++KI  R  +      +  +   +  +  +  ++D   L     T  PR
Sbjct: 59  AVRHVENFTDVNEKIAARIDEG----DLGGSELGVARRFIEGTLEDMRGLNLQRATVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+P+++ LI+ ++  GHAYE++  + FD ++   YG  S +++ + +      E+  
Sbjct: 115 VSEHVPEILALIERLLESGHAYESDGSVYFDVTTFEEYGKLSNQRVTDLEAQGDPTERSE 174

Query: 185 KKNPADFILWKRSTPMEPG-----------------WESPWGRGRPGWHIECSAMSSHYL 227
           K+NPADF LWK     E                   W+SPWG GRPGWHIECSAM+  +L
Sbjct: 175 KRNPADFALWKAGGVSESAIRDHEKVDHAHPPDGETWDSPWGEGRPGWHIECSAMAMTHL 234

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
            +  DIH GG DL+FPHHENEIAQS  A   +  AN W+H G L  +G KMS S GNF T
Sbjct: 235 DETIDIHVGGHDLVFPHHENEIAQSEAATG-KPFANYWLHTGLLETDGEKMSSSLGNFFT 293

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------------ILL 334
           ++  L+  +FG       V+R   L T Y     F+   + EA+             I  
Sbjct: 294 VSAALD--EFG-----PDVLRSFYLATEYGSNQTFSEDAMAEAKERYERLERAYERAIEA 346

Query: 335 SKWPQTSTS------KGIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
           +  P   T       +  I+ A    + A+ +D     A+ AL +LA    ++ D    +
Sbjct: 347 ADGPDARTKIEDHELRAAIEEARGEFVRAMNDDFGVREAMSALLELAGALNRHLDAREEY 406

Query: 386 NASAHILGIEVCK------------EHLNKNISIA---IEKLVQERLILLKMKKFSSADY 430
           +  A    IE  +                  + +A   +E +++ R    +   +  AD 
Sbjct: 407 DYRALRRAIETIEGFGGEIFGFSFGSGAGDGVDLAGDLVELVLEVREAEREAGNYERADA 466

Query: 431 IRKQLESKGFILED 444
           +R+ LE+ G  +ED
Sbjct: 467 LREDLEALGVTVED 480


>gi|219114520|ref|XP_002176430.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402676|gb|EEC42666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 568

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/346 (39%), Positives = 190/346 (54%), Gaps = 33/346 (9%)

Query: 5   IKIYNTLERKITEFQAI--DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--Y 60
           + ++N+  R    F+ +  D + + MY CGPTVYDFAH+GN R  + +DVL R+LRY  Y
Sbjct: 71  LSLFNSKTRAKEPFRPVRADTNVVSMYTCGPTVYDFAHVGNFRAFLTYDVLKRVLRYLGY 130

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    VT+V N+TD+DDKII+RA ++       D +  +T +  Q F  D   L      
Sbjct: 131 H----VTHVCNLTDVDDKIIQRANEQKI-----DHVQTLTRRYEQHFRDDLQALNIQPAC 181

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMG-TR 178
             PRAT HI  M+ LI+ +     AYE  +    F T + P YG+    +++ Q+M  T 
Sbjct: 182 QYPRATEHIDDMMDLIRVLRDKELAYETPDGSWYFRTQAQPRYGT-QLVQLNYQEMAQTE 240

Query: 179 VPEKYHKKNPADFILWKRSTP----MEPGWES-PWGRGRPGWHIECSAMSSHYLG-KVFD 232
             E   K++ ADF LWK        M+  WES     GRPGWH+ECSAM+ H+ G    D
Sbjct: 241 RGESDDKEHFADFCLWKAFKTGVDRMDAAWESNDIALGRPGWHLECSAMARHFFGDDTID 300

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +HGGG+DL FPHHENEIAQS  A       N W HNGF+N++  KMSKS GNF+T+    
Sbjct: 301 LHGGGIDLKFPHHENEIAQSEGATG-NVFCNCWFHNGFVNMDNEKMSKSLGNFLTLR--- 356

Query: 293 ETKKFGGRSWPAPV--IRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
                G    P  V   R   + + YR+ + FT Q +T A   +++
Sbjct: 357 -----GACPTPDDVRAYRYLAVSSQYRQALAFTPQAMTAARNAIAR 397


>gi|296269905|ref|YP_003652537.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermobispora bispora DSM 43833]
 gi|310947224|sp|D6Y1N8|MSHC_THEBD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296092692|gb|ADG88644.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermobispora bispora DSM 43833]
          Length = 403

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/373 (34%), Positives = 191/373 (51%), Gaps = 32/373 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y+T  R++ E    +PS   RMYVCG T YD  H+G+A   + FD++ R  R     
Sbjct: 19  LRLYDTATREVRE---TEPSGKARMYVCGITPYDATHLGHANTYLAFDLVNRAWRD--AG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y +N TD+DD ++ERA+       I      +  +  + F  D   L  L P    
Sbjct: 74  HDVHYTQNTTDVDDPLLERAQA------IGVDWRELADREIELFRTDMEALRILPPRDYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS------RRKIDEQKMGT 177
             T  I  +  +I  ++  G  Y   +++ F  ++ P +G+ S       R++  ++ G 
Sbjct: 128 AVTEVIDDIAEVIVRLMERGATYRIGDDVYFSVAAAPKFGAISGYDEETMRRLFAERGGD 187

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P +  K+NP D++LW+   P EP WESP+GRGRPGWH+EC+A++  +LG  FD+ GGG
Sbjct: 188 --PGRAGKRNPLDWLLWRGERPGEPSWESPFGRGRPGWHVECTAIALRHLGPGFDVSGGG 245

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHE    +   A      A  ++H G +  EG KMSKS GN + ++EL      
Sbjct: 246 SDLIFPHHEMGACEGHVATGEWPFARAYVHAGMVAYEGEKMSKSRGNLVFVSELRHEAD- 304

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA--- 354
                    IRLA+L  HYR   ++T  RLTEAE  L++W          D A L A   
Sbjct: 305 ------PMAIRLALLARHYRSDWEWTPDRLTEAEARLARWRAAVARPAGPDGAALLARVR 358

Query: 355 --LYNDLNTVSAI 365
             + +DL+   A+
Sbjct: 359 ERIADDLDAPGAL 371


>gi|13375695|ref|NP_078813.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|74761587|sp|Q9HA77|SYCM_HUMAN RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|10433519|dbj|BAB13978.1| unnamed protein product [Homo sapiens]
 gi|55957407|emb|CAI17004.1| novel protein [Homo sapiens]
 gi|55957784|emb|CAI16971.1| novel protein [Homo sapiens]
 gi|119629531|gb|EAX09126.1| hypothetical protein FLJ12118 [Homo sapiens]
          Length = 564

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 178/323 (55%), Gaps = 22/323 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 52  VQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCS 111

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R
Sbjct: 112 IVM-VMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLR 164

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
            T +IPQ+I  I+ II  G+AY  A   + FD  S  + YG      +    +G   P  
Sbjct: 165 VTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLV--GVVPGPVGE--PAD 220

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL F
Sbjct: 221 SDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAF 280

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQ     + E+  N ++H+G L+ +G+  KMSKS  N+ITI + L+T      
Sbjct: 281 PHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKT------ 334

Query: 301 SWPAPVIRLAMLMTHYREPIDFT 323
            +   V R   L + YR  ID++
Sbjct: 335 -FSPDVFRFFCLRSSYRSAIDYS 356


>gi|283782829|ref|YP_003373583.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441414|gb|ADB13880.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 588

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 164/538 (30%), Positives = 241/538 (44%), Gaps = 116/538 (21%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +YNT       F       + MYVCG TV    HIG+ R  I FD++ R +LR  Y
Sbjct: 61  ENLHLYNTASHSTNTFVPKKHGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY 120

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+++A +   +      I        ++F K    L  LAPT 
Sbjct: 121 K---VTFVRNVTDIDDKIMKKANESGQNWWERAYIY------EREFTKSYNTLGVLAPTV 171

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQK 174
           +PRAT HI  M+ LI+ +I  GHAY            + FD  S  +YG  + +  ++ +
Sbjct: 172 EPRATGHITDMVELIERLIERGHAYVIKDNDGNPTGNVYFDVPSWEHYGELTHQNQNQNE 231

Query: 175 M------------GTRVPEKYH--------------KKNPADFILWKRSTPM---EPGWE 205
                        G  V    +              K +P DF LWK        +  W+
Sbjct: 232 TCADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWK 291

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           +P+G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A    ++AN+W
Sbjct: 292 TPFGEGRPGWHIECSAMSHRYLGNDFDIHGGGLDLRFPHHENEMAQTRAAGW--ESANVW 349

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H+ ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q
Sbjct: 350 MHSAWVTAKGEKMSKSLGNGLSVPVVLANNS-------AWVVRYALGAVQYRAMLEWSDQ 402

Query: 326 RLTE--------------AEILLSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQA 367
            L E              A+ LL K P     + +    +      A+ +D+N   AI  
Sbjct: 403 ALVESKSAYDRIMNFLERADRLLDKKPTCEEVRSVNADELPEDFTRAMNDDINVSGAIAE 462

Query: 368 LHKLAR------------------ESTKNHDLLPIFNASAHI--LGIE------------ 395
           +    R                  ES +    L +    A +  LG++            
Sbjct: 463 IFTTIRQGNTLIDDCSKDSSQAQSESIQKLIYLAVLQVRAMLDTLGLDPYAKTWASNNNQ 522

Query: 396 ---------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                      KEH   +  I ++  ++ R    K K F++AD IR  L + G ++ D
Sbjct: 523 SPAEGSNGKESKEHSALDSLITLQ--LKARADARKAKDFATADAIRDALNNAGIVIVD 578


>gi|298253308|ref|ZP_06977100.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532703|gb|EFH71589.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 588

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 163/536 (30%), Positives = 241/536 (44%), Gaps = 112/536 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYY 61
           + + +YNT       F       + MYVCG TV    HIG+ R  I FD++ R +LR  Y
Sbjct: 61  ENLHLYNTASHSTNTFVPKKHGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY 120

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+VRN+TDIDDKI+++A +   +      I        ++F K    L  LAPT 
Sbjct: 121 K---VTFVRNVTDIDDKIMKKANESGQNWWERAYIY------EREFTKSYNTLGVLAPTV 171

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQK 174
           +PRAT HI  M+ LI+ +I  GHAY            + FD  S  +YG  + +  ++ +
Sbjct: 172 EPRATGHITDMVELIERLIERGHAYVIKDNDGNPTGNVYFDVPSWEHYGELTHQNQNQNE 231

Query: 175 M------------GTRVPEKYH--------------KKNPADFILWKRSTPM---EPGWE 205
                        G  V    +              K +P DF LWK        +  W+
Sbjct: 232 TCADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWK 291

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           +P+G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A    ++AN+W
Sbjct: 292 TPFGEGRPGWHIECSAMSHRYLGNDFDIHGGGLDLRFPHHENEMAQTRAAGW--ESANVW 349

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H+ ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q
Sbjct: 350 MHSAWVTAKGEKMSKSLGNGLSVPVVLANNS-------AWVVRYALGAVQYRAMLEWSDQ 402

Query: 326 RLTE--------------AEILLSKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQA 367
            L E              A+ LL K P     + +    +      A+ +D+N   AI  
Sbjct: 403 ALVESKSAYDRIMNFLERADRLLDKKPTCEEVRSVNADELPEDFTRAMNDDINVSGAIAE 462

Query: 368 LHKLAR------------------ESTKNHDLLPIFNASAHI--LGIEVCKEHLNKNIS- 406
           +    R                  ES +    L +    A +  LG++   +    N + 
Sbjct: 463 IFTTIRQGNTLIDDCSKDSSQAQSESVQKLIYLAVLQVRAMLDTLGLDPYAQTWASNDNQ 522

Query: 407 --------------IAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILED 444
                          A++ L+    + R    K K F++AD IR  L + G ++ D
Sbjct: 523 SPAEGSNGKENKEHSALDSLITLQLKARADARKAKDFATADAIRDALNNAGIVIVD 578


>gi|13938199|gb|AAH07220.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Homo
           sapiens]
          Length = 564

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/323 (39%), Positives = 178/323 (55%), Gaps = 22/323 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 52  VQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCS 111

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R
Sbjct: 112 IVM-VMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLR 164

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
            T +IPQ+I  I+ II  G+AY  A   + FD  S  + YG      +    +G   P  
Sbjct: 165 VTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLV--GVVPGPVGE--PAD 220

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL F
Sbjct: 221 SDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAF 280

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQ     + E+  N ++H+G L+ +G+  KMSKS  N+ITI + L+T      
Sbjct: 281 PHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKT------ 334

Query: 301 SWPAPVIRLAMLMTHYREPIDFT 323
            +   V R   L + YR  ID++
Sbjct: 335 -FSPDVFRFFCLRSSYRSAIDYS 356


>gi|311899990|dbj|BAJ32398.1| putative ATP-dependent L-cysteine--1D-myo-inosityl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase
           [Kitasatospora setae KM-6054]
          Length = 409

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/339 (36%), Positives = 181/339 (53%), Gaps = 23/339 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T    + E     P+  R+YVCG T YD  H+G+A     FD++ R+  +     
Sbjct: 19  LRIYDTATSSVREVVPTGPTA-RLYVCGITPYDATHLGHAATYTTFDLVQRV--WKDAGH 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TD+DD ++ERA      +      +++  + T  F +D T L  L P H   
Sbjct: 76  DVLYVQNVTDVDDPLLERA------VATGQDWTVLAERETALFREDMTALRMLPPAHYIG 129

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE------QKMGTR 178
           A   IP ++ L+Q ++  G AYE + ++ F   S P +G  S    ++      ++ G  
Sbjct: 130 AVESIPWIVPLVQRLLASGAAYEVDGDVYFSVESDPRFGEVSGLTREQMLPVFAERGGD- 188

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE+  KKNP D +LW  + P EP WE+  G GRPGWHIEC A++  +LG  FDI GGG 
Sbjct: 189 -PERPGKKNPLDALLWLAARPGEPAWETELGHGRPGWHIECVAIALQFLGMDFDIQGGGS 247

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHE   A +  A      A  ++H G + L+G KMSKS GN + ++ L   ++ G
Sbjct: 248 DLSFPHHEMGAAHAQVALGEHPYARAYVHAGMVGLDGHKMSKSRGNLVFVSAL---RRDG 304

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
               PA  IRLA+L  HYR   ++T   L  A   L+ W
Sbjct: 305 VD--PA-AIRLALLAHHYRSDWEWTPADLDTALTRLAAW 340


>gi|145499052|ref|XP_001435512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402645|emb|CAK68115.1| unnamed protein product [Paramecium tetraurelia]
          Length = 679

 Score =  217 bits (553), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 191/335 (57%), Gaps = 23/335 (6%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+ N+L+  ++  F  I+   +  Y CGPTVY  +H+G+AR  +  DV+ R LR Y+  
Sbjct: 37  LKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLRDYFNY 96

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             ++ V NITDIDDKII  A+     +   D +   T    + F      L    P    
Sbjct: 97  DLLS-VMNITDIDDKIINGAK-----LAKQDFLEF-TRVWEKDFFSAMEALNIELPDVIT 149

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG-SFSRRK-------IDEQKM 175
           R ++++P+++  I+ II +G+AY++N  + FD       G ++ + +       + E + 
Sbjct: 150 RVSDYVPEIVTFIEKIIANGYAYDSNGSVYFDVQKYLADGHTYPKMRPEMNVDLLQEGEG 209

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
            ++V ++  K++P DF LWK S P EP W SPWG GRPGWHIECS M+S  LG   D+H 
Sbjct: 210 ESQVNKQQEKRSPNDFALWKASKPEEPKWPSPWGEGRPGWHIECSVMASAILGNPIDLHA 269

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DLIFPHH+N +AQ+      ++  N +IH G LN+  RKMSKS  NF+TI+E+L  K
Sbjct: 270 GGIDLIFPHHDNSLAQAEACFNCDQWINYFIHLGHLNIADRKMSKSLKNFLTIDEVL--K 327

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ++  R      +RL   +  Y   ++++ +++ +A
Sbjct: 328 RYTPRQ-----VRLNFAIHQYDAVMNYSEEQVEQA 357


>gi|109894936|sp|Q2S3T5|SYC_SALRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 516

 Score =  217 bits (552), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 243/524 (46%), Gaps = 85/524 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            ++YNTL  +    + I+  ++R Y CGPTVY +AHIGN R  +  D++ R       + 
Sbjct: 6   FRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIGWD- 64

Query: 65  CVTYVRNITDI-----DDKI-------IERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            VT V NITD+     DD +       ++RA +       N  I  +    T+ F++D  
Sbjct: 65  -VTNVSNITDVGHLTQDDLVDPGGEDKMQRALEREGERFAN--IYDLARHYTEAFLEDWG 121

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
            L    P  +PRAT H+   +  +  ++   HAY  +  + F   S+ +YG  S     +
Sbjct: 122 ALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGNTEAQ 181

Query: 173 QKMGTR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           Q   T   V E   K++P DF LWK        W SPWG G PGWHIECS M   YLG  
Sbjct: 182 QLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQYLGDR 241

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+H GG DLIFPHHE EIAQ+       +  N W+H  FL +EG KMSKS GNF T+ +
Sbjct: 242 FDLHTGGEDLIFPHHECEIAQNQSL-AGHQVVNYWVHTRFLQVEGEKMSKSKGNFYTVRD 300

Query: 291 LL-----------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           L+             ++ GG    A  +R A++   YR+P +FT+  L  A   + ++  
Sbjct: 301 LIAPGPDDDHVPDSVREQGGVDPLA--LRYALMQGQYRKPFNFTLDTLHTAARHVRRYQD 358

Query: 340 TSTS---------------KGIIDP---AVLSALYNDLNT----------VSAIQALHKL 371
            +                  G + P     L A+ +DLNT          V AI+   +L
Sbjct: 359 AAERVDAALAADADGPDELGGRLRPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTDRL 418

Query: 372 ARESTKN-HDLLPIFNASAHILGIEVCKEH--------------LNKNISIAIEKLVQER 416
              + ++  + L   NA   +LG+ V  EH                 ++S +I+ L+++R
Sbjct: 419 NGATARSARNWLDRTNA---LLGV-VEPEHEADQRTDAGSENGLAPAHLSDSIDTLLEDR 474

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                  +++ AD IR  LE+ G  + D   PD     T W+++
Sbjct: 475 EAARADGEYARADAIRDTLEALGIEVMD--TPDG----TEWERR 512


>gi|193216531|ref|YP_001999773.1| cysteinyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001854|gb|ACF07069.1| cysteinyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 401

 Score =  217 bits (552), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 151/421 (35%), Positives = 212/421 (50%), Gaps = 33/421 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y+CGPTVY++ HIGN RP++ FD++ R  RY   E  + Y+ NITDIDDKII ++ +E  
Sbjct: 6   YLCGPTVYNYPHIGNMRPIVTFDLMIRAQRYLGDE--IFYLHNITDIDDKIINKSLEE-- 61

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
               N +   ITS   + ++   T      PT   R T+ +  M   IQ +I    AY+ 
Sbjct: 62  ----NKSEKEITSFYEKYYLNLFTLFNLEMPTKVIRVTDSLDDMYNYIQRLIDIKAAYQV 117

Query: 149 NNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
              + FD     N YGS S +KI          +K+ K NP DF LWK  T     + SP
Sbjct: 118 GKNVFFDIEKYQNTYGSISNQKIANLNYD---EDKFQKNNPFDFALWKE-TSKGIKFASP 173

Query: 208 WGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           +G GRPGWH ECS     Y  GK  DIH GG+DLIFPHHENE  Q       +  A  W+
Sbjct: 174 FGEGRPGWHTECSCFIDKYFEGKTIDIHAGGIDLIFPHHENENIQHFALHH-QPIAKNWM 232

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G LN + +KMSKS GN I  ++ LE        + A   +L ML T+Y +PI+ T + 
Sbjct: 233 HFGTLNYKNQKMSKSIGNLIYPHDFLE-------KYEADTYKLLMLTTNYAKPINLTDEM 285

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHD 380
           L   +  ++K+ +   SK +++    S     +N + A+ A    A+ +      TK+ +
Sbjct: 286 LVLNQNQINKF-KVIASKCLLEKMHDSIDQEKVNHIIALIASLNFAKANEELIKLTKSKE 344

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
               F A   ILG        +K I+   E+L Q+    +  K F  AD +R +L  KG 
Sbjct: 345 KYTTFIAIMKILGFNFA----SKTITKEDEELYQQWKNEVANKNFEQADTLRAKLIKKGL 400

Query: 441 I 441
           I
Sbjct: 401 I 401


>gi|310947220|sp|D7BSS4|MSHC_STRBB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|297161859|gb|ADI11571.1| cysteinyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 409

 Score =  217 bits (552), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/366 (36%), Positives = 196/366 (53%), Gaps = 31/366 (8%)

Query: 21  IDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +DP  + R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TDIDD +
Sbjct: 32  LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDIDDPL 89

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           +ERA      +   D  + +  + T  F +D T L  L P H   A   IP ++ L++ +
Sbjct: 90  LERA------VANGDDWTALAERETTLFREDMTALRMLPPRHYIGAVEAIPGIVPLVERL 143

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFIL 193
              G AYE   +I F   S P++G  S       R +  ++ G   P++  KKNP D +L
Sbjct: 144 RDAGAAYELEGDIYFSVESDPSFGGVSGLDAEAMRLLSAERGGD--PDRPGKKNPLDPML 201

Query: 194 WKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           W  + P EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG DL FPHHE   + +
Sbjct: 202 WLAARPGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHA 261

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                    A  ++H G + L+G KMSKS GN + ++ L           PA  IRLA+L
Sbjct: 262 QVLTGERPFAKAYVHAGMVALDGEKMSKSKGNLVFVSALRRDGVD-----PA-AIRLALL 315

Query: 313 MTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
             HYRE  ++T   L EA+  L++W      P    +  ++D  + +AL NDL+  SA+ 
Sbjct: 316 AHHYREDWEWTDGVLQEAQERLARWRAAVSRPDGPPADALLD-EIRTALANDLDAPSALA 374

Query: 367 ALHKLA 372
           A+ + A
Sbjct: 375 AVDRWA 380


>gi|94495840|ref|ZP_01302419.1| cysteinyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424532|gb|EAT09554.1| cysteinyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 518

 Score =  216 bits (551), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 161/517 (31%), Positives = 243/517 (47%), Gaps = 85/517 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L R +  F  I+  + R+Y CGPTVY++AHIGN R  +  D L R L   +   
Sbjct: 23  LRLFNSLTRAVAPFAPIEDGHARVYSCGPTVYNYAHIGNLRAYVFTDTLRRTL--LWKGL 80

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT++ NITD+          DDK+   AR    SI        I +  TQ F ++   L
Sbjct: 81  SVTHIINITDVGHLTSDADAGDDKMEAAARASAKSI------WDIAAHYTQAFKQNIADL 134

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             +AP+    AT+++PQMI   + I    H YE ++ + FD+ S+P+YG+ +  + D   
Sbjct: 135 NIIAPSEWTVATDYVPQMIEFAEKIA-PDHCYELDSGLYFDSRSVPDYGALAGGRDDAAH 193

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              R+     K+NP+DF +W++S P E     W+SPWG+G PGWH+ECS MS   LG+ F
Sbjct: 194 --ARIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSQARLGQPF 251

Query: 232 DIHGGGLDLIFPHHENEIAQ-----SCC------ADRIEKTANIWIHNGFLNLEGRKMSK 280
           DIH GG+D    HH NEIAQ     +CC       D     A  W+HN FL     KMSK
Sbjct: 252 DIHTGGIDHREIHHPNEIAQNQAFHACCDPDVGAVDAGFTGARWWMHNNFLVDRQGKMSK 311

Query: 281 SNGNFITINELLETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRLTEAEILLSK--- 336
           S G F T+  L++           P+  RL  L  HYR  ++F+   L  A   L +   
Sbjct: 312 SKGGFTTLFSLIDAGVH-------PLAYRLLCLGAHYRSELEFSADNLAAALTRLKRLVM 364

Query: 337 -------------W--PQTSTSKGIIDPAVL-------SALYNDLNTVSAIQALHK-LAR 373
                        W  P+    +  + P +        +A+ +DL T  A+  L + +A 
Sbjct: 365 GVEGLKARAEGVTWQSPRLDYLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEEAIAV 424

Query: 374 ESTKNHDLLPIFNASAHILG---IEVCKEHLNKNISIA------IEKLVQERLILLKMKK 424
           +     + L +  A    LG   + + +  L      A      +E  ++ R      K 
Sbjct: 425 KKVPADEKLCLIAAFDQALGFNLLSLTRADLRMRPKDAQLTADQVETELERRAAARANKD 484

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           F+ +D IR +L +KG  + D  +P       RW  +P
Sbjct: 485 FALSDTIRDELIAKGVEVMD-GDP------LRWDWRP 514


>gi|118084394|ref|XP_416955.2| PREDICTED: similar to MGC88928 protein [Gallus gallus]
          Length = 624

 Score =  216 bits (551), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 127/310 (40%), Positives = 180/310 (58%), Gaps = 22/310 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y CGPTVYD AH+G+A   + FD++ R+L  ++ E  V  V  ITDIDDKII RA + + 
Sbjct: 64  YSCGPTVYDHAHLGHACSYVRFDIIRRILTRFF-ETEVIMVMGITDIDDKIIRRANEMNI 122

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE- 147
           S P+  A++ I  ++   F +D   L  L PT   R T +IPQ+I  I+ II +G AY  
Sbjct: 123 S-PV--ALARIYEED---FKQDMASLKVLPPTVYMRVTENIPQIISFIKTIIANGQAYAT 176

Query: 148 ANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           +   + FD +S    YG  +    D Q       +++ +    DF LWK + P E  W S
Sbjct: 177 SQGNVYFDVNSWGERYGVLTAVSPDTQGEAVDTDKRHGR----DFALWKAAKPQELSWSS 232

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG+GRPGWHIECS +SS   GK  DIH GG+DL FPHHENEIAQ     + E+  N ++
Sbjct: 233 PWGKGRPGWHIECSTISSAVFGKQLDIHTGGIDLAFPHHENEIAQCEVYHQCEQWGNYFL 292

Query: 267 HNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           H+G L+++G   KMSKS  N+ITI + L  KKF    +     R+  L + Y   ++F+ 
Sbjct: 293 HSGHLHVKGSQEKMSKSLKNYITIKDFL--KKFSSDQF-----RMFCLRSRYSSAVEFSD 345

Query: 325 QRLTEAEILL 334
           + + +A+ +L
Sbjct: 346 ETMNDAKNVL 355


>gi|156082812|ref|XP_001608890.1| cysteinyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796140|gb|EDO05322.1| cysteinyl-tRNA synthetase, putative [Babesia bovis]
          Length = 662

 Score =  216 bits (550), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/292 (42%), Positives = 163/292 (55%), Gaps = 25/292 (8%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
            EF   +   I  Y CGPTVYD AH+G+AR  +  D +  +L  Y+    V  V N+TDI
Sbjct: 71  VEFVPENGRRINWYCCGPTVYDTAHLGHARTYVACDTIRSILERYFNYD-VHLVINVTDI 129

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DDKII+RA  E      N+    + S+   +F +D   L    P    R +  +P++I  
Sbjct: 130 DDKIIQRANDE--GCKFNE----LASRWEHEFWEDMAALGVDPPNVITRVSEFLPEIISY 183

Query: 136 IQNIILHGHAYEANNEIIFDTSSI------------PN-YGSFSRRKIDEQKMGTRVPEK 182
           I+ I+ +G+AYEA+  + FD  +             PN Y    R    E   GT     
Sbjct: 184 IETIMKNGYAYEADGSVYFDIDAFIGSDKHVYAKLEPNSYNDLCRITDGE---GTLGEVS 240

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--VFDIHGGGLDL 240
            HKK+P DF LWK++ P EP W SPWG GRPGWHIECSAM S+  GK  + DIH GG+DL
Sbjct: 241 THKKSPRDFALWKKAKPGEPFWSSPWGEGRPGWHIECSAMCSNVFGKDTIIDIHSGGIDL 300

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
            FPHH+NEIAQS       +  N ++H G L+++G KMSKS  NFI+I +LL
Sbjct: 301 KFPHHDNEIAQSEAFSDRNQWVNYFLHFGHLHIQGLKMSKSLKNFISIKQLL 352


>gi|271969633|ref|YP_003343829.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270512808|gb|ACZ91086.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 459

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 138/396 (34%), Positives = 205/396 (51%), Gaps = 40/396 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R++         ++RMY CGPTVY +AH+GN R  ++ D++ R+        
Sbjct: 2   LRLYDTRNRQVGPVLPEGARSMRMYTCGPTVYRYAHVGNFRSYVLADLIRRVSERQ--RI 59

Query: 65  CVTYVRNITDI-------------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            V   RNITD+             +DKI+ +AR E  +      + I        F+ DT
Sbjct: 60  RVVACRNITDVGHLVDDAEIDPAGEDKILLQARAEGRT-----GLEIARFYEAA-FLSDT 113

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKI 170
             L    P H PRAT  I  MI +I  +I  GHAY   +  + FD +S P YG  S  ++
Sbjct: 114 ATLNIRPPEHSPRATETIDLMIEMIAKLIEKGHAYPTPDGSVFFDAASFPTYGEISGNRL 173

Query: 171 DEQKMGTRVPE-KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           D  K G R+      K+  AD+ LWK S   E  WE+PWGRG PGWHIECSAMS  +LG+
Sbjct: 174 DRLKPGHRLEGVDPRKRFHADWALWKPSD-REMTWEAPWGRGFPGWHIECSAMSLRFLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+H GG+DL FPHHE+E AQS      E   + W+H   L  +GRKM+KS GN + + 
Sbjct: 233 HIDVHTGGIDLRFPHHEDERAQSDATAGHEVVRH-WVHGEHLLFDGRKMAKSTGNVVLLQ 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKG 345
           ++++             +RLA+L   YR+ ++ T   L  A+  L +W     + S +  
Sbjct: 292 DVVDA------GLDPLAVRLALLEHRYRQQMNLTWDTLRAADRTLRRWRSHVAEWSETPS 345

Query: 346 IIDPA-----VLSALYNDLNTVSAIQALHKLAREST 376
              PA     + +A  +DL+T  A++ + +L R+ +
Sbjct: 346 RPMPAERVSRIEAAFDDDLDTPLALRLMRELERDDS 381


>gi|332654253|ref|ZP_08419997.1| cysteine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517339|gb|EGJ46944.1| cysteine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 480

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 164/490 (33%), Positives = 234/490 (47%), Gaps = 74/490 (15%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+   K  EF    P ++ MY CGPTVY FAHIGN R  I+ DVL + LRY   +  V
Sbjct: 3   LYNSATHKKEEFTTHTPGHVEMYTCGPTVYHFAHIGNLRSYIMEDVLEKFLRYSGYD--V 60

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             V NITD+          +DK+++ A++EH ++        I    T  F  D  +L  
Sbjct: 61  NRVMNITDVGHLSSDADTGEDKMLKGAKREHKTV------MEIAQYYTDAFFSDCAKLNI 114

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P     AT  I + I ++  ++  G+AY A   + FD+S +  Y  F+    ++  +G
Sbjct: 115 KTPDTVQPATGCIDEYIKIVSGLLDKGYAYVAGGNVYFDSSKLDRYYIFNDHNEEDLAVG 174

Query: 177 TR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            R  V E  +K+N  DF+LW   +  E     W+SPWG G PGWHIECS +S  Y G+  
Sbjct: 175 VREGVEEDSNKRNKNDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSGISLKYNGEYL 234

Query: 232 DIHGGGLDLIFPHHENEIAQS-------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           D+H GG+D  FPHH NEIAQS        C          W H   LN    KMSKS G 
Sbjct: 235 DLHCGGIDNAFPHHTNEIAQSESYLGHPWCKQ--------WFHVHHLNTNSGKMSKSKGE 286

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS- 343
           F+T++ LLE K +   S+     R   L +HYR+ + F+ + L  A+    K  +   + 
Sbjct: 287 FLTVS-LLEEKGYDPLSY-----RFFCLQSHYRKGLVFSWENLDNAQGAYQKLIKRIAAL 340

Query: 344 --KGIIDPAV--------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
              G  D AV        L  + NDLNT  A+  L+   +  T +   L I      +L 
Sbjct: 341 KEGGEPDQAVVQEYREKFLQQVGNDLNTSMAVTLLYDALKAKTDDATKLAILGDFDQVLS 400

Query: 394 I-------EVCKEHLNK------NISI------AIEKLVQERLILLKMKKFSSADYIRKQ 434
           +       +V KE   +      N +I      A++ LV ER    K K F+ AD IR +
Sbjct: 401 LSLLEKAAQVRKEQAAQKTTSAGNYTITGEGDPAVDALVLERYQAKKAKDFAKADQIRDE 460

Query: 435 LESKGFILED 444
           L+++G  + D
Sbjct: 461 LKAQGIEITD 470


>gi|83815337|ref|YP_445146.1| cysteinyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756731|gb|ABC44844.1| cysteinyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 569

 Score =  216 bits (550), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 163/524 (31%), Positives = 243/524 (46%), Gaps = 85/524 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            ++YNTL  +    + I+  ++R Y CGPTVY +AHIGN R  +  D++ R       + 
Sbjct: 59  FRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIGWD- 117

Query: 65  CVTYVRNITDI-----DDKI-------IERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            VT V NITD+     DD +       ++RA +       N  I  +    T+ F++D  
Sbjct: 118 -VTNVSNITDVGHLTQDDLVDPGGEDKMQRALEREGERFAN--IYDLARHYTEAFLEDWG 174

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
            L    P  +PRAT H+   +  +  ++   HAY  +  + F   S+ +YG  S     +
Sbjct: 175 ALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGNTEAQ 234

Query: 173 QKMGTR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           Q   T   V E   K++P DF LWK        W SPWG G PGWHIECS M   YLG  
Sbjct: 235 QLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQYLGDR 294

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+H GG DLIFPHHE EIAQ+       +  N W+H  FL +EG KMSKS GNF T+ +
Sbjct: 295 FDLHTGGEDLIFPHHECEIAQNQSL-AGHQVVNYWVHTRFLQVEGEKMSKSKGNFYTVRD 353

Query: 291 LL-----------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           L+             ++ GG    A  +R A++   YR+P +FT+  L  A   + ++  
Sbjct: 354 LIAPGPDDDHVPDSVREQGGVDPLA--LRYALMQGQYRKPFNFTLDTLHTAARHVRRYQD 411

Query: 340 TSTS---------------KGIIDP---AVLSALYNDLNT----------VSAIQALHKL 371
            +                  G + P     L A+ +DLNT          V AI+   +L
Sbjct: 412 AAERVDAALAADADGPDELGGRLRPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTDRL 471

Query: 372 ARESTKN-HDLLPIFNASAHILGIEVCKEH--------------LNKNISIAIEKLVQER 416
              + ++  + L   NA   +LG+ V  EH                 ++S +I+ L+++R
Sbjct: 472 NGATARSARNWLDRTNA---LLGV-VEPEHEADQRTDAGSENGLAPAHLSDSIDTLLEDR 527

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                  +++ AD IR  LE+ G  + D   PD     T W+++
Sbjct: 528 EAARADGEYARADAIRDTLEALGIEVMD--TPDG----TEWERR 565


>gi|332242118|ref|XP_003270233.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 564

 Score =  216 bits (550), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 179/324 (55%), Gaps = 24/324 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 52  VQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFG-- 109

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   
Sbjct: 110 CNIVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYL 163

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II  GHAY  A   + FD  +  + YG      +    +G   P 
Sbjct: 164 RVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKARGDKYGKLV--GVVPGPVGE--PA 219

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL 
Sbjct: 220 DSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLA 279

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ     + E+  N ++H+G L+++G+  KMSKS  N+ITI + L+T     
Sbjct: 280 FPHHENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT----- 334

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT 323
             +     R   L + YR  I+++
Sbjct: 335 --FSPDTFRFFCLRSSYRSAINYS 356


>gi|117928379|ref|YP_872930.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|310947169|sp|A0LU34|MSHC_ACIC1 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|117648842|gb|ABK52944.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 403

 Score =  216 bits (550), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 210/404 (51%), Gaps = 33/404 (8%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
            +++T  R++    +   ++  MYVCG T YD  H+G+A   + FD+L R   ++     
Sbjct: 20  SLFDTASRRLVTVGSQQGAS--MYVCGITPYDATHLGHAATYVAFDLLVRT--WHDAGVT 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V Y +N+TD+DD ++ERARQ      ++     I ++ T +F  D   L  + P      
Sbjct: 76  VRYAQNVTDVDDPLLERARQ------VDQPWEAIAARETAKFRADMAALRVVPPDRYVGV 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ------KMGTRV 179
              +PQ+I LI+ +   G  YE + +  F T +IP++G+ S    D+       + G   
Sbjct: 130 VESLPQIIGLIEVLRSRGLTYELDGDQYFATHAIPDFGAVSHLGRDDMIALFAARGGD-- 187

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P++  KK+P D +LW+   P EP W +P+GRGRPGWH+EC+A++  +L    D+ GGG D
Sbjct: 188 PDRAGKKDPLDALLWRGKRPEEPSWPAPFGRGRPGWHVECAAIALTHLPLPLDVQGGGAD 247

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHH+   AQ+  A    + A  ++H G +  +G KMSKS GN + +++L        
Sbjct: 248 LVFPHHDMTAAQAEAATG-RRFARAYVHTGLVAYQGEKMSKSLGNLVFVSDLCAAGA--- 303

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLS 353
                  +RLA+L  HYR   ++T + L EA   L++W      P+ +   G++  AV  
Sbjct: 304 ---DPMAVRLALLDHHYRTEWEWTPRLLDEATDRLAEWRAAVRRPRGAPGDGLL-AAVRD 359

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-ILGIEV 396
            L +DL+   AI  + +   +   + D   +  A A  +LG+ +
Sbjct: 360 RLADDLDAPGAIALIDEWTTQDGDDPDAPTLVAAMADALLGVHL 403


>gi|332242120|ref|XP_003270234.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 572

 Score =  216 bits (550), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 179/324 (55%), Gaps = 24/324 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 52  VQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFG-- 109

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   
Sbjct: 110 CNIVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYL 163

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II  GHAY  A   + FD  +  + YG      +    +G   P 
Sbjct: 164 RVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKARGDKYGKLV--GVVPGPVGE--PA 219

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL 
Sbjct: 220 DSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLA 279

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQ     + E+  N ++H+G L+++G+  KMSKS  N+ITI + L+T     
Sbjct: 280 FPHHENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT----- 334

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT 323
             +     R   L + YR  I+++
Sbjct: 335 --FSPDTFRFFCLRSSYRSAINYS 356


>gi|294013315|ref|YP_003546775.1| cysteinyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676645|dbj|BAI98163.1| cysteinyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 509

 Score =  216 bits (549), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 127/356 (35%), Positives = 187/356 (52%), Gaps = 42/356 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L R +  F  I P++ R+Y CGPTVY++AH+GN R  +  D L R L +   + 
Sbjct: 16  LRLFNSLTRAVEPFAPIQPNHARVYSCGPTVYNYAHLGNLRAYVFTDTLRRTLLWKGLD- 74

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT++ NITD+          DDK+   AR +  SI        I +  T  F ++   L
Sbjct: 75  -VTHIINITDVGHLTSDADAGDDKMEAAARAQAKSI------WDIAAHYTDAFKRNIADL 127

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P+    AT+++PQMI   + I    H YE  + + FD+SS+P+YG+ +  + D   
Sbjct: 128 NIIPPSEWTVATDYVPQMIAFAEKIA-PAHCYELESGLYFDSSSVPDYGALAGGRDDAAH 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              R+     K+NP+DF +W++S P E     W+SPWG+G PGWH+ECS MS   LG  F
Sbjct: 187 --ARIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSEARLGHPF 244

Query: 232 DIHGGGLDLIFPHHENEIAQ-----SCCADRIEKTANI-----WIHNGFLNLEGRKMSKS 281
           DIH GG+D    HH NEIAQ      CC +     A       W+HN FL     KMSKS
Sbjct: 245 DIHTGGIDHREIHHPNEIAQNQAFHGCCGEADAAAAGFTGARWWMHNNFLVDRQGKMSKS 304

Query: 282 NGNFITINELLETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRLTEAEILLSK 336
            G F T+  L++           P+  RL  L  HYR  ++F+ + ++ A   L +
Sbjct: 305 KGGFTTLFSLIDAGVH-------PLAYRLLCLGAHYRSELEFSAESVSAALTRLKR 353


>gi|28493314|ref|NP_787475.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572575|ref|NP_789355.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|61216626|sp|Q83GF1|SYC1_TROWT RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|61216630|sp|Q83HS8|SYC1_TROW8 RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|28410707|emb|CAD67093.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476355|gb|AAO44444.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 466

 Score =  216 bits (549), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 138/394 (35%), Positives = 195/394 (49%), Gaps = 42/394 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+TL R+I      D   + +YVCGPTV    HIG+ R  +V+D L R L Y     
Sbjct: 3   LNLYDTLSRRIVTLDCRD--RVELYVCGPTVQSPPHIGHMRSGVVYDCLRRWLEY--KGL 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI+  AR    S    +    I  + +  F +    L    P ++P 
Sbjct: 59  PVLYVRNITDIDDKILASAR----STETGETWWQIAYRVSGLFNEAYKALFVKPPDYEPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            T HIP +I  I+ +I    AY A   +  + F     P+YG  +    D++ +      
Sbjct: 115 VTAHIPDIIKAIEILIQKNVAYRAMDGSGNVFFSIDKHPSYGELT----DQKDLLIDDCI 170

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF LWK     +P    WESPWG GRPGWHIECS M++ YLG  F IHGGG+
Sbjct: 171 TPGKRDPRDFTLWKEKKDTDPDLAFWESPWGPGRPGWHIECSVMATKYLGTRFAIHGGGV 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQ+         A+IW+H G +N+EG KMSKS GN + + + L      
Sbjct: 231 DLRFPHHENELAQARALG--AHFADIWMHTGAVNVEGIKMSKSFGNSVLVQDALSKVS-- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---------------EILLSKWPQTSTS 343
                   +R   L  HYR  +++T   L++A               + L  +  +    
Sbjct: 287 -----PSALRYYFLTAHYRSTLNYTENSLSQACNTWNKLQGCIYRVYDYLEREGYENDFC 341

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              ++    ++L NDLN   A+  +H   RE  +
Sbjct: 342 VSQLNTDFSTSLDNDLNIPEALAIVHNKVREMNR 375


>gi|76799584|ref|ZP_00781709.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76585067|gb|EAO61700.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 351

 Score =  215 bits (548), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 131/367 (35%), Positives = 200/367 (54%), Gaps = 35/367 (9%)

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
           ++D   L     T  PR  +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + 
Sbjct: 1   MEDVAALGVKPATKNPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLAN 60

Query: 168 RKIDEQKMGT--RVP-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
           + +++ ++G   RV  E   K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++
Sbjct: 61  KTLEDLEIGASGRVDGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMAT 120

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNG 283
             LG   DIHGGG DL FPHH NEIAQS    +  KT AN W+HNGF+N++  KMSKS G
Sbjct: 121 EILGDTIDIHGGGADLEFPHHTNEIAQSEA--KTGKTFANYWMHNGFVNVDNEKMSKSLG 178

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           NFIT++++L       +S    VIR  +    YR+P++FT + + +AE+ L K+ + + +
Sbjct: 179 NFITVHDML-------KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNL-KYLKNTFN 230

Query: 344 KGIID-----------PAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASA 389
             I +            A   A+ +D NT + I  + ++A+     H    +   F    
Sbjct: 231 LPIQENANDEELEQFVKAFQGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELL 290

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            I GI   +E L+ +    IE L+++R      + F++AD IR +L  +G  L D K   
Sbjct: 291 EIFGIVFQEEVLDAD----IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTK--- 343

Query: 450 NGQRMTR 456
           +G R TR
Sbjct: 344 DGVRWTR 350


>gi|330805509|ref|XP_003290724.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
 gi|325079146|gb|EGC32761.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
          Length = 638

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 183/321 (57%), Gaps = 22/321 (6%)

Query: 18  FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           F   D   I  Y CGPTVYD +H+G+AR  I FD+L R++R Y G   + +V NITDIDD
Sbjct: 48  FSNKDGKTITWYACGPTVYDASHMGHARTYISFDILRRVMRDYLGFN-IRFVMNITDIDD 106

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KII R++++      N + S ++ K    F +D   L  L P    R T ++PQ++  +Q
Sbjct: 107 KIIIRSKEQ------NISHSDLSKKWESSFFEDMKALNVLPPDALTRVTEYVPQIVDYVQ 160

Query: 138 NIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKM-----GTRVPEKYHKKNPA 189
            II +G AYE+   + FDT S     +YG      +  + +     G        K++P 
Sbjct: 161 KIIDNGFAYESEGSVYFDTQSFIKSHDYGKLEPNSVGNENLAAEGEGALSVGISDKRSPF 220

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK+S   EP W SPWG GRPGWHIECSAM+S  LG   DIH GG DL FPHH+NE+
Sbjct: 221 DFALWKKSKEGEPVWSSPWGEGRPGWHIECSAMASDILGDNIDIHSGGSDLKFPHHDNEL 280

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS      ++  N +IH+G L ++G KMSKS  NFITI E LE  K+  R      +R+
Sbjct: 281 AQSEAYFGNKQWINYFIHSGHLLIDGLKMSKSLKNFITIKEALE--KYTSRQ-----MRM 333

Query: 310 AMLMTHYREPIDFTVQRLTEA 330
             ++  Y + ++++ + +  A
Sbjct: 334 FFILHKYDKAMNYSSESMGYA 354


>gi|12045107|ref|NP_072918.1| cysteinyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351147|sp|P47495|SYC_MYCGE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3844851|gb|AAC71473.1| cysteinyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078699|gb|ABY79317.1| cysteinyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 428

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 151/440 (34%), Positives = 214/440 (48%), Gaps = 53/440 (12%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y+CGPTVY+  H+GN RP+IVFDVL R+L+    +  V +V+NITDIDDKII+ A+Q
Sbjct: 18  INIYLCGPTVYNDLHLGNTRPLIVFDVLNRVLKK--AKYTVNFVQNITDIDDKIIKIAQQ 75

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           +  S       S++T +    +     +L  L P    + T  I ++   I  ++   HA
Sbjct: 76  QEVSE------SVVTKQQITAYKSLLKKLNIL-PIKHIQITEKIDKIPDYIDQLVNQNHA 128

Query: 146 Y-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           Y    N + F  +S+  YG  + R +  ++  T       KKN  DF+LWK +T     W
Sbjct: 129 YVSTQNNVYFAVNSLKQYGYLANRMVHLEETDTD------KKNKLDFVLWKITTA-GIKW 181

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            S WG GRPGWH+EC+ +  +       IHGGG+DL FPHHENE A          T + 
Sbjct: 182 NSKWGLGRPGWHVECAFLIDYCFKNELTIHGGGVDLKFPHHENENALHMALYNQPITKH- 240

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT- 323
           W+H G L +E +KMSKS  NF+   + L    F        V+R      HY  PID   
Sbjct: 241 WMHIGHLMIENQKMSKSLQNFLLAVDFLNFHDF-------RVLRWIFYQKHYLHPIDLNQ 293

Query: 324 ---------VQRLTEAEILLSKWPQTSTSKGIIDPA----VLSALYNDLNTVSAIQALHK 370
                    +QR+ +   +   W   S    +I P     V SAL ++LN  +A+ A+ K
Sbjct: 294 SLIEKANNDIQRIAKTLNVARTWLVYSEQSELISPKQYDPVFSALLDNLNFANAVAAIWK 353

Query: 371 LARE---STKNHDL------LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           L ++   S K  D       L     S  +LGI     H   N+     +L++E  IL K
Sbjct: 354 LIKKINTSIKTKDFSVLREQLSFLEWSIDLLGISFKSIHTKLNV-----RLIKEWSILHK 408

Query: 422 MKKFSSADYIRKQLESKGFI 441
            K    AD IRK+L  K  +
Sbjct: 409 QKAMDKADQIRKKLIKKMLL 428


>gi|241856247|ref|XP_002416056.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215510270|gb|EEC19723.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 547

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/336 (36%), Positives = 176/336 (52%), Gaps = 25/336 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+ + R     +       + Y CGPTVYD +H+G+A   +  D++ R+L  ++ + 
Sbjct: 42  IRVYDPIGRAKVPLKLQHERVAKWYSCGPTVYDSSHVGHAYTYLRTDIIRRILGRFF-DV 100

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V  ITDIDDKII RA Q      + +    +  +  ++F +D  +L  L PT   R
Sbjct: 101 DVVMVMGITDIDDKIIARAVQ------LGETPETLARRYEREFREDIAKLGVLPPTLYAR 154

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + ++P ++   + +   GHAY A +  + FD S  P+YG F         MG+ +P   
Sbjct: 155 VSEYVPSVVRFCEVLRDKGHAYAAADGSLYFDVSQRPDYGLFR-----APGMGSSIPVVG 209

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAM+S  LG   DIH GG DL FP
Sbjct: 210 VKRDPRDFALWKGAKPGEPQWTSPWGPGRPGWHIECSAMASELLGDSVDIHTGGRDLAFP 269

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFL-----NLEGRKMSKSNGNFITINELLETKKFG 298
           HHENE AQS       +    W+H G +       +  KMSKS GN + +  +LE     
Sbjct: 270 HHENEEAQSRSRHGKSRWVRHWLHMGQVMVAKGGTDAVKMSKSAGNTLPLQTVLEDHS-- 327

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
                A  +RL  L +HY   +    + L +A++ L
Sbjct: 328 -----AETLRLLCLRSHYSADVVVGPEALHQAQVNL 358


>gi|319956986|ref|YP_004168249.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419390|gb|ADV46500.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 470

 Score =  215 bits (548), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 159/490 (32%), Positives = 245/490 (50%), Gaps = 56/490 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++I++++++    F+ I P    +YVCGPTVYD AH+G+AR  + FD+L R LR   G 
Sbjct: 2   QMQIFDSVKKAKVPFEPIRPGEASIYVCGPTVYDEAHLGHARSALSFDLLSRTLR-SLGY 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K VT  +N TDIDDKII++  +         ++  +T    Q+++++   L       +P
Sbjct: 61  K-VTLAKNFTDIDDKIIKKINE------TGQSLQELTDYYIQRYLEEMAALGVRRADIEP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE- 181
           +AT  +  +  +++ +I  G AY   + ++ FDT    +YG  S    DE++  +R+ E 
Sbjct: 114 KATESLDAIQAMVEGLIEKGCAYRTESGDVYFDTCKDEHYGEISHMLGDEEEARSRLCEI 173

Query: 182 -KYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAM-SSHYLGK---VFDIHG 235
               K++P DF LWK  S   +  +++  G GRPGWHIECSAM   H+ G      DIHG
Sbjct: 174 KTGEKRHPRDFALWKACSGEGDVCFDTELGSGRPGWHIECSAMIEKHFQGNGEYTIDIHG 233

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL+FPHHENE AQ+ CA   E  A  W+HNGF+ ++G KMSKS GN   + + L   
Sbjct: 234 GGADLLFPHHENEAAQTRCATGHE-IAKYWMHNGFVQIDGEKMSKSLGNSFFLKDALAI- 291

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGI 346
                 +P  ++R  ++  HYR   +F    L  A+  L K           +   ++  
Sbjct: 292 ------YPGELLRFYLIGVHYRNDFNFNEVDLQAAKKRLDKLYRLKKRLTPGKVGEAEAG 345

Query: 347 IDPAVLSALYNDLNTVSAI-----------QALHKLARESTKNHDLLPIFNASAHILGIE 395
              A+  A+ +DLNT  A+           +AL    R+      LL        +LG  
Sbjct: 346 FVQALKEAMADDLNTSKALAIVDEMVSAANEALDANPRDKVLKRTLLGNIAFIDELLGFG 405

Query: 396 VC------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                   +  +++     IE  + ER    K K FS AD IR +L+ KG  L D   P+
Sbjct: 406 GSDPYAWFQHGVSEEERQEIEAKIAERDAAKKAKDFSKADTIRDELKEKGIALMD--TPE 463

Query: 450 NGQRMTRWKQ 459
                T+W++
Sbjct: 464 G----TKWEK 469


>gi|147901608|ref|NP_001083370.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor
           [Xenopus laevis]
 gi|82237606|sp|Q6PA41|SYCM_XENLA RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|38014676|gb|AAH60463.1| MGC68641 protein [Xenopus laevis]
          Length = 572

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 135/330 (40%), Positives = 188/330 (56%), Gaps = 22/330 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN+L RK       DP+    Y CGPTVYD AH+G+A   + FD + R+L   +G  
Sbjct: 55  IKVYNSLTRKKEPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDTIRRILLKVFGID 114

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  +  +TDIDDKII+RA++      +N +   +     Q F +D T L  L PT   R
Sbjct: 115 IVMAMV-VTDIDDKIIKRAKE------LNISPVALARTYEQDFKQDMTALRVLPPTVYMR 167

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
            T  IPQ+I  IQ II +GHAY  +   + FD  SI + YG F+    D     + + +K
Sbjct: 168 VTESIPQIISFIQQIIANGHAYSTSQGNVYFDVQSIGDQYGKFNDSFCDAASE-SALQDK 226

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            H +   DF LWK S P EP W SPWG+GRPGWHIECS ++S   GK  DIH GG+DL F
Sbjct: 227 RHIR---DFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGIDLAF 283

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQ     +  +  N ++H G L+L+G   KMSKS  N++TI E L       +
Sbjct: 284 PHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLKNYVTIKEFL-------K 336

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           S+    +R+  L + Y+  ++++ + + +A
Sbjct: 337 SFSPDHLRMFCLRSKYKSAVEYSKESMHDA 366


>gi|260787696|ref|XP_002588888.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
 gi|229274059|gb|EEN44899.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
          Length = 512

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 145/407 (35%), Positives = 207/407 (50%), Gaps = 60/407 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L R+       + S    Y CGPTVYD AH+G+A   + FD++ R++  ++    V
Sbjct: 2   VYNSLCRRKVPLILPNKSFASWYQCGPTVYDHAHLGHACCYVKFDIIRRIMEDFFNIDLV 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V  ITDIDDKII +AR+      +N   + +      +F +D  RL    PT   R T
Sbjct: 62  M-VMGITDIDDKIISKARE------LNMEFTHVAQTFANEFKRDMVRLRVQPPTVYTRVT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPN-YGSFS-------RRKIDEQKMGT 177
           N++PQ+I  +Q II  G+AY  +N  + FD     + YG  S          +D++K G 
Sbjct: 115 NYMPQIITFVQKIIDRGYAYPTDNGSVYFDVRKYGDRYGKLSVPSCFFLSPAVDKEKRGF 174

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG--RPGWHIECSAMSSHYLGKVFDIHG 235
           R           DF LWK   P EP W SPWG+G  RPGWHIECS M+S   G   DIH 
Sbjct: 175 R-----------DFALWKAGKPGEPWWTSPWGKGKGRPGWHIECSTMASAIFGDQLDIHT 223

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN--LEGRKMSKSNGNFITINELLE 293
           GG+DL+FPHHENEIAQ      + + AN ++H G L+   +  KMSKS  N ITI E LE
Sbjct: 224 GGIDLMFPHHENEIAQCEAHHCVPQWANYFLHAGHLHKTSDKDKMSKSLKNTITIREFLE 283

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKWPQTSTS--KG--- 345
                   + A   R+  LMT YR  +++    + EA   +  L+ +   + +  +G   
Sbjct: 284 -------KYTANQFRIFCLMTRYRSVVEYCDTMMNEAVSVQRTLTSFLNNADAYIRGQLQ 336

Query: 346 --IIDPAVL------------SALYNDLNTVSAIQALHKLARESTKN 378
              ID A+L             A+ +D +T +A++A+  L R + K 
Sbjct: 337 CEAIDEALLMEKLGETKDKFRRAISDDFDTRAALEAILHLVRVTNKQ 383


>gi|26334827|dbj|BAC31114.1| unnamed protein product [Mus musculus]
 gi|148690121|gb|EDL22068.1| mCG11180, isoform CRA_d [Mus musculus]
          Length = 335

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/313 (38%), Positives = 174/313 (55%), Gaps = 18/313 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYL 148

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T +IPQ+I  I+ II HGHAY  A   + FD  +    G    + ++     T  P  
Sbjct: 149 RVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHA---RGDKYGKLVNTVPSATAEPGD 205

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+DL F
Sbjct: 206 SDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAF 265

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI +    +  G  
Sbjct: 266 PHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDSAGLQAVGAE 325

Query: 301 SWPAPVIRLAMLM 313
               P +  A+L+
Sbjct: 326 P---PGLLFALLL 335


>gi|15639085|ref|NP_218531.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025325|ref|YP_001933097.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094392|sp|O83129|SYC_TREPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735067|sp|B2S239|SYC_TREPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3322350|gb|AAC65085.1| cysteinyl-tRNA synthetase (cysS) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189017900|gb|ACD70518.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291059509|gb|ADD72244.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 520

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 161/523 (30%), Positives = 247/523 (47%), Gaps = 98/523 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   FQ  +  ++R+Y CGPTVY++ H+GN R  +  D + R L ++ G +
Sbjct: 3   LRVYNTLTRQQEHFQPWEHGHVRLYGCGPTVYNYPHLGNLRAYVFQDTVRRTL-HFLGYR 61

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VTYV NITD+          +DK++ R+ Q H       ++  + +     F +DT  L
Sbjct: 62  -VTYVMNITDVGHLESDADSGEDKLV-RSAQAH-----GHSVLQVAAHYRAAFFRDTALL 114

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P+    A++ I  MI  I+ ++  GHAY A   + FD  S P+Y SF    +++ +
Sbjct: 115 GIEEPSIVCNASDCIQDMIAFIEQLLARGHAYCAGGNVYFDVRSFPSYESFGSAAVEDVQ 174

Query: 175 MG-----TRVPEKYHKKNPADFILW-KRSTPMEPG--WESPWGRGRPGWHIECSAMSSHY 226
            G      RV    HK++  DF+LW  RS  +     W+SPWGRG PGWHI CSAMS  +
Sbjct: 175 EGEDAARARVAHDTHKRDARDFVLWFTRSKFVRHALTWDSPWGRGYPGWHIGCSAMSMKF 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL--NLEGR-------- 276
           LG   DIH GG+D I  HH NE AQ C A         W+H+ FL   L+ R        
Sbjct: 235 LGPRCDIHIGGVDHIRVHHRNERAQ-CEAITGAPWVRYWLHHEFLLMQLQKRAVHADMGS 293

Query: 277 -------KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT------ 323
                  KMSKS G F+T++ L E      R +     R  +L   YR  + F+      
Sbjct: 294 SVVSSFSKMSKSCGQFLTLSSLQE------RGFQPADFRFFLLSGQYRTQLAFSWDALKT 347

Query: 324 --------VQRL----------------TEAEILLSKWPQTSTSKG-IIDPAVLSALYND 358
                   V+R+                T AE    +  ++  S+  ++     +AL +D
Sbjct: 348 ARAARRSFVRRVARVVDAARATTGSVRGTSAECAAERVCESRASESELLLTDFRAALEDD 407

Query: 359 LNTVSAIQALHKLARESTKNHDL-LPIFNASAHILGIEVCKE---HLNKNISIA------ 408
            +T  A+ AL KL R+++    L +     +  +LG+ + +E    L+  +         
Sbjct: 408 FSTPRALSALQKLVRDTSVPPSLCVSALQVADTVLGLGIIQEATASLSAQVPAGDTLPQR 467

Query: 409 -------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                  I +LV+ R    + + F  AD IR+QL+++G  LED
Sbjct: 468 PLPSEEWIGQLVRARAHARQTRDFPRADEIRRQLKAEGIELED 510


>gi|307295116|ref|ZP_07574958.1| cysteinyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879590|gb|EFN10808.1| cysteinyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 505

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/352 (36%), Positives = 188/352 (53%), Gaps = 38/352 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L R +  F  I P++ R+Y CGPTVY++AH+GN R  +  D L R L +   + 
Sbjct: 16  LRLFNSLTRTVDPFAPIQPNHARVYSCGPTVYNYAHLGNLRAYVFTDTLRRTLLWKGLD- 74

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            VT++ NITD+          DDK+   AR +  SI        I +  T  F ++   L
Sbjct: 75  -VTHIINITDVGHLTSDADAGDDKMEAAARAQAKSI------WDIAAHYTDAFKRNIADL 127

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             +AP+    AT+++PQMI   + I    H YE    + FD+SS+P+YG+ +  + D   
Sbjct: 128 NIIAPSEWTVATDYVPQMIAFAEKIA-PAHCYELETGLYFDSSSVPDYGALAGGRDDAAH 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              R+     K+NP+DF +W++S P E     W+SPWG+G PGWH+ECS MS   LG  F
Sbjct: 187 --ARIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSEARLGHPF 244

Query: 232 DIHGGGLDLIFPHHENEIAQS---CCADRIE---KTANIWIHNGFLNLEGRKMSKSNGNF 285
           DIH GG+D    HH NEIAQ+   C  +  +     A  W+HN FL     KMSKS G F
Sbjct: 245 DIHTGGIDHREIHHPNEIAQNQAYCACNDAQPGFTGAQWWMHNNFLVDRQGKMSKSKGGF 304

Query: 286 ITINELLETKKFGGRSWPAPVI-RLAMLMTHYREPIDFTVQRLTEAEILLSK 336
            T+  L++           P+  RL  L  HYR  ++F+ + ++ A   L +
Sbjct: 305 TTLFSLIDAGVH-------PLAYRLLCLGAHYRSELEFSAESVSAALTRLKR 349


>gi|70953127|ref|XP_745684.1| cysteine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526086|emb|CAH76958.1| cysteine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 582

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 192/331 (58%), Gaps = 27/331 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ + 
Sbjct: 23  LMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYF-KY 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L PT   R
Sbjct: 82  DVFMVINITDIDDKIIKRSEEEKVNF------TELARKWEYEFWEDMKNLNVLLPTSITR 135

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
            + ++ ++I  I+ II + +AY  +   + FD  +    PN+  ++R +    K  T++ 
Sbjct: 136 VSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNH-FYARMEPMSVKDETKIL 194

Query: 181 E--------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           E          +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVLD 254

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +L
Sbjct: 255 IHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNML 314

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
                  + + +  IR+  L+  +   ++++
Sbjct: 315 -------KKYTSNQIRILFLLNKWDSFMNYS 338


>gi|170694947|ref|ZP_02886096.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
 gi|170140045|gb|EDT08224.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
          Length = 255

 Score =  214 bits (546), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 108/244 (44%), Positives = 151/244 (61%), Gaps = 12/244 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  Q--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFINALHEDADALGIARPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A++ ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIETLEANGYAYQASDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK+S   EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKQSKEGEPADTGWDSKYGRGRPGWHIECSAMGCALLGERFDIHGGGQ 233

Query: 239 DLIF 242
           DL F
Sbjct: 234 DLQF 237


>gi|312197580|ref|YP_004017641.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EuI1c]
 gi|311228916|gb|ADP81771.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EuI1c]
          Length = 426

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/362 (33%), Positives = 190/362 (52%), Gaps = 33/362 (9%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           ++ +YVCG T YD  H+G+A   + +D+L R LR    +  V +V N+TD+DD ++ERA 
Sbjct: 46  SVSLYVCGITPYDATHLGHAFTYVTYDLLNRALRDAGYQ--VRFVENVTDVDDPLLERAA 103

Query: 85  QEHPSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           +        D +  + +  + T+ F  D T L  L P H       IP ++ ++  ++  
Sbjct: 104 R--------DGVDWTEVAERETELFRTDMTALRVLPPDHYVGVVEAIPLIVEMVTELVAA 155

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKR 196
           G  Y  + ++ F  ++ P +G  S       R +  ++ G   P++  KK+P D  LW+ 
Sbjct: 156 GATYTLDGDVYFSVAAAPRFGYVSGLDAAAMRALSAERGGD--PDRRGKKDPLDPPLWRA 213

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
             P EP W SP+G GRPGWHIECSA++  YLG V D+ GGG DL+FPHHE   A +  A 
Sbjct: 214 EQPGEPSWPSPFGPGRPGWHIECSAIARRYLGDVIDVQGGGEDLVFPHHECSSAHAEVAT 273

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                A  ++H G + L+G KMSKS GN   ++ L        R      IRLA+L   +
Sbjct: 274 GHNPFARRYVHTGMVGLDGHKMSKSRGNLELVSRLR------ARGVAPAAIRLALLAHSH 327

Query: 317 REPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           R+  ++T   L  AE  L +W      P    + G++   V +A+ +DL+T +A+ A+ +
Sbjct: 328 RDDWEWTEGELAAAEARLGRWRAAVALPAGPDATGLL-AEVRAAVASDLDTPTALGAVDR 386

Query: 371 LA 372
            A
Sbjct: 387 WA 388


>gi|237785512|ref|YP_002906217.1| MshC ligase [Corynebacterium kroppenstedtii DSM 44385]
 gi|310947182|sp|C4LIL9|MSHC_CORK4 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|237758424|gb|ACR17674.1| MshC ligase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 520

 Score =  214 bits (545), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 144/462 (31%), Positives = 231/462 (50%), Gaps = 53/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T  R++T     D + +  YVCG T YD  H+G+A   + FDVL R L    G +
Sbjct: 24  LHMWDTASREVTPLTPSDEATV--YVCGITPYDSTHLGHAATYVTFDVLNRQL-LANGHR 80

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            V +V+N+TD+DD + ERA++        D +    +  + T  F +D   L  + PT  
Sbjct: 81  -VNFVQNVTDVDDPLFERAQR--------DGVDWQELGEEQTDLFRQDMANLGVIPPTSY 131

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSR--RKIDEQKMG 176
             A   IP +I ++  ++ +G AY  ++    ++  D ++ P +G  SR      EQ   
Sbjct: 132 IGAVEAIPDVIDMVSTLLDNGSAYVVDDPTYPDVYADRTATPQFGYESRYDEATMEQFFA 191

Query: 177 TRV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            R   P++  K++P D +LW+   P EP W+SP+GRGRPGWHIEC+A+++ YLG  FD+ 
Sbjct: 192 ERGGDPDRPGKRDPLDSLLWRAERPGEPAWDSPFGRGRPGWHIECAAIAARYLGSHFDVQ 251

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A    A  +E+ A+ ++H G + L G KMSKS GN + ++ L   
Sbjct: 252 GGGEDLIFPHHEYSAAHVEAACGVERMADHYMHTGLIALGGVKMSKSLGNLVFVSRLCNA 311

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------PQTS 341
                       IRLA+   HYR+  +++   L  A   L+ W                +
Sbjct: 312 GT------DPSSIRLALYAGHYRDQRNWSDALLAAASRRLALWRTAVETVHAHNDADSEA 365

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAH---ILGIE 395
            ++ ++D  V  AL  DL+T +A+  + + A    +  K  DL  +   +AH    + + 
Sbjct: 366 RARRLVDD-VRQALATDLDTPAAVDLVDEWAGSIVDKEKIWDLPGVDGKNAHESLSVPVP 424

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                 +  +S+A     Q ++ +L   K S AD    +L S
Sbjct: 425 CAAPATDDKLSVA-----QGKITILDDGKDSEADAKSVELAS 461


>gi|296282436|ref|ZP_06860434.1| cysteinyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 483

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/481 (32%), Positives = 234/481 (48%), Gaps = 54/481 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K++N+L R++  F  +     R+Y CGPTVY++ HIGN R  +  DVL R L +  G 
Sbjct: 6   QLKLFNSLNRQLEPFVPVHEGEARVYTCGPTVYNYPHIGNMRAYVFADVLGRTLSWR-GY 64

Query: 64  KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           K +T++ NITD+    DD      + E  +     +I  I    TQ F  D   L    P
Sbjct: 65  K-LTHIINITDVGHLTDDADAGEDKLEKMAAKQKQSIWDIAEHYTQAFKADVAALNIREP 123

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
                AT++I QMI   + I    H Y+  + + FD S++ +YG  +R   +E +   R+
Sbjct: 124 AEWSVATDYIEQMIDFAKQIEAK-HCYQLESGLYFDVSTVEDYGRLARAVTEEGE--GRI 180

Query: 180 PEKYHKKNPADFILWKRSTP------MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                K+N ADF +W R+TP      ME  W+SPWGRG PGWH+ECS M    LG  FDI
Sbjct: 181 DTVEGKRNAADFAIW-RTTPEGETRQME--WDSPWGRGAPGWHLECSVMGGKLLGFPFDI 237

Query: 234 HGGGLDLIFPHHENEIAQS---C-CA---DRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           H GG+D    HH NEIAQ+   C C    D     A IW+HN FL     KMSKS+G F+
Sbjct: 238 HTGGIDHREIHHPNEIAQNQAYCGCGGLDDAAHSGAKIWMHNNFLVERSGKMSKSSGEFL 297

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-----EILLSKWPQTS 341
            +  L++      + +     R+  L  HYR  ++F+ + L  A      ++++  P   
Sbjct: 298 RLQLLID------KGYHPLAYRMMCLQAHYRSELEFSWEGLGAALTRLKRMVMAVQPLRE 351

Query: 342 TSKGIID-----PAVL---SALYNDLNTVSAIQALH-KLARESTKNHDLLPIFNASAHIL 392
                 D     PA+     A+ +DLNT  A+ AL   LA +         +      +L
Sbjct: 352 VESAATDHPKFAPALAKFQDAMADDLNTAIALTALEDALATKKVDAGIKRAVVERMDAVL 411

Query: 393 G---IEVCKEHLN---KNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           G   +++ +  L    K+  I    IE  ++ R      K F+++D IR +L +KG  + 
Sbjct: 412 GLGLLDLARTDLRLRPKDAIITEAEIEDALERRKAARAEKDFATSDAIRDELAAKGVEVM 471

Query: 444 D 444
           D
Sbjct: 472 D 472


>gi|26344287|dbj|BAC35800.1| unnamed protein product [Mus musculus]
 gi|148690123|gb|EDL22070.1| mCG11180, isoform CRA_f [Mus musculus]
          Length = 392

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 170/301 (56%), Gaps = 19/301 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCN 96

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   R
Sbjct: 97  -VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLR 149

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
            T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  P  
Sbjct: 150 VTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAEPGD 205

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+DL F
Sbjct: 206 SDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAF 265

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI +     +  GR
Sbjct: 266 PHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDC----RLSGR 321

Query: 301 S 301
           S
Sbjct: 322 S 322


>gi|255084145|ref|XP_002508647.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
 gi|226523924|gb|ACO69905.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
          Length = 744

 Score =  214 bits (544), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 190/384 (49%), Gaps = 74/384 (19%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++ N+  +    F  +D + +  Y+CGPTVYD AH+G+AR  + FDV+ R++  Y+    
Sbjct: 43  RLLNSFTKTKVPFVPLDGNRVGWYICGPTVYDSAHMGHARNYVNFDVIRRVMTDYF-RYD 101

Query: 66  VTYVRNITDIDDKIIERA--RQEHPSIPINDAI--------------------------- 96
           V ++ N+TDIDDKI+ RA  R+    I   +A+                           
Sbjct: 102 VRFIMNVTDIDDKIVMRAHLRRSEAMIAAAEAVGGLDALIAPLKALLASGEKNLGEQEAL 161

Query: 97  ------SIITSKNTQ---------------------QFVKDTTRLACLAPTHQPRATNHI 129
                 +I+    T+                     +F++D   +    P    R + + 
Sbjct: 162 TASLCAAIVAKDPTKVADPDWTVQDGYLALAHAFEAEFMEDMRLMGVARPDALTRVSEYT 221

Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSI---PN--YGSFSRRKIDEQKM-----GTRV 179
            +++  IQ II  G+AYE+N  + FD  +    PN  Y   ++  +   ++     G   
Sbjct: 222 EKIVQYIQTIIDRGYAYESNGSVYFDVPTFEQSPNHKYAKLNKEALKNVELAMDGEGALA 281

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +   K+   DF+LWK S P EP W SPWG GRPGWHIECSAM S  LG+  DI+GGG+D
Sbjct: 282 ADASEKRAENDFVLWKASKPGEPRWPSPWGLGRPGWHIECSAMCSDILGEAVDINGGGID 341

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHEN++AQS     I++  N ++H G L+++G KMSKS  NFITI   L       
Sbjct: 342 LNFPHHENQLAQSEAHYDIKQWVNYFVHTGHLHIDGLKMSKSLKNFITIRAAL------- 394

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT 323
           + + A  IR   L+  + +P+D T
Sbjct: 395 KMYTARQIRFLFLLHQWSDPMDLT 418


>gi|68072763|ref|XP_678295.1| cysteine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56498716|emb|CAH94957.1| cysteine--tRNA ligase, putative [Plasmodium berghei]
          Length = 582

 Score =  213 bits (543), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 192/331 (58%), Gaps = 27/331 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ + 
Sbjct: 23  LMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYF-KY 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L P+   R
Sbjct: 82  DVFMVINITDIDDKIIKRSEEEKVNF------TELARKWEYEFWEDMKSLNVLLPSSITR 135

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
            + ++ ++I  I+ II + +AY  +   + FD  +    PN+  ++R +    K  T++ 
Sbjct: 136 VSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNH-FYARMEPMSVKDETKIL 194

Query: 181 E--------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           E          +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVLD 254

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +L
Sbjct: 255 IHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNML 314

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
                  + + +  IR+  L+  +   ++++
Sbjct: 315 -------KKYTSNQIRILFLLNKWDSFMNYS 338


>gi|258597035|ref|XP_001347434.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|254922413|gb|AAN35347.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 677

 Score =  213 bits (543), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 125/328 (38%), Positives = 179/328 (54%), Gaps = 25/328 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ +  V
Sbjct: 109 VNNSLTHSKVEFIPQEGNKIKWYACGPTVYDAAHLGHARTYVSFDIIRRILVNYF-KYDV 167

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V NITDIDDKII+R+ +E          + +  K   +F +D   L  L PT   R +
Sbjct: 168 FMVINITDIDDKIIKRSVEEKI------GFTELARKWEYEFWEDMKSLNVLLPTAITRVS 221

Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-----YGSFSRRKI-DEQKM---- 175
            ++  ++  I+ II + +AY      + FD           Y       + DE K+    
Sbjct: 222 EYVGDIVKYIEKIIENKYAYVSEEGSVYFDIDEFKKSEKHFYARMEPLSVKDENKILEGE 281

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G        KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V DIH 
Sbjct: 282 GDLGVISKKKKNAYDFALWKSSKPNEPHWDSPWGKGRPGWHIECSTMASNILGDVLDIHS 341

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +L   
Sbjct: 342 GGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNML--- 398

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFT 323
                 + +  IR+  L+  +   ++++
Sbjct: 399 ----TKYTSNQIRILFLLNKWDNFMNYS 422


>gi|301606905|ref|XP_002933053.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 572

 Score =  213 bits (542), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 184/330 (55%), Gaps = 22/330 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN+L R+       DP+    Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 55  IKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILLKVFGID 114

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
               V  +TDIDDKII+RA++      +N +   +     Q F +D T L  L PT   R
Sbjct: 115 -TVVVMVVTDIDDKIIKRAKE------LNISPVALARTYEQDFKQDMTALKVLPPTVYMR 167

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
            T +IPQ+I  I++II +G+AY  +   + FD  SI   YG F+    D           
Sbjct: 168 VTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGERYGKFNDSFSDTASESA----S 223

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W SPWG+GRPGWHIECS ++S   GK  DIH GG+DL F
Sbjct: 224 QDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGIDLAF 283

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQ     +  +  N ++H G L+L+G   KMSKS  N++T+ E L       +
Sbjct: 284 PHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLRNYVTVKEFL-------K 336

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           S+     R+  L + Y+  ++++   + +A
Sbjct: 337 SFSPDQFRMFCLRSKYKSAVEYSNGSMHDA 366


>gi|219685228|ref|ZP_03540048.1| cysteine--tRNA ligase [Borrelia garinii Far04]
 gi|219673324|gb|EED30343.1| cysteine--tRNA ligase [Borrelia garinii Far04]
          Length = 480

 Score =  213 bits (542), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 239/494 (48%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E      +N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTRDFSELANF--ANVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F KD  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISKFFTEAFFKDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-IDEQ 173
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +    ID+ 
Sbjct: 113 NVVYPDKVLIASKHIPNMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
              +RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS+GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSHGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDP 349
           L E      +++     R   L +HYR  + F+   L  ++I       + S     +DP
Sbjct: 292 LEE------QNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASLDP 345

Query: 350 AVLSAL---------------YN--------DLNTVSAIQALHKLARES----TKNHDLL 382
           A L+ L               Y+        DLN    +  L ++ +           L 
Sbjct: 346 ADLNMLNKDLKNFGFSAEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLKLA 405

Query: 383 PIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            IF+    + L  E+ K+  N N+ +   ++ L++ER I    K F  AD IR     KG
Sbjct: 406 FIFDEIMSLNLREEILKKSENHNVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKG 465

Query: 440 FILEDYKNPDNGQR 453
           F+L D K     +R
Sbjct: 466 FVLIDTKEGTKVKR 479


>gi|307330786|ref|ZP_07609922.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces violaceusniger Tu 4113]
 gi|306883589|gb|EFN14639.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces violaceusniger Tu 4113]
          Length = 409

 Score =  213 bits (542), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/365 (35%), Positives = 193/365 (52%), Gaps = 30/365 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TD+DD ++ERA++ 
Sbjct: 39  RIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDDPLLERAQRN 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  D  + +  + T  F +D T L  L P H   A   IP ++ L++ +   G AY
Sbjct: 97  ------GDDWTALAERETALFREDMTALRMLPPRHYIGAVESIPGIVPLVERLRDLGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E   +I F   S P++GS SR      R +  ++ G   PE+  KKNP D +LW  +   
Sbjct: 151 ELEGDIYFSVESDPSFGSVSRLDAEAMRLLSAERGGD--PERPGKKNPLDPMLWMAAREG 208

Query: 201 EPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+    G GRPGWHIEC A++  +LG  FD+ GGG DL FPHHE   + +       
Sbjct: 209 EPSWDGGSLGSGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHAQVLTGER 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L+G KMSKS GN + ++ L           PA  IRLA+L  HYR  
Sbjct: 269 PFAKTYVHAGMVALDGEKMSKSKGNLVFVSALRRDGVD-----PA-AIRLALLAHHYRSD 322

Query: 320 IDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            ++T   L EAE  L +W      P   ++  +++  +  AL NDL++ +A+ A+ + A 
Sbjct: 323 WEWTDGVLREAEERLGRWRAAVSRPDGPSAAALVE-EIREALANDLDSPAALAAVDRWAA 381

Query: 374 ESTKN 378
             T  
Sbjct: 382 AQTAT 386


>gi|82541403|ref|XP_724944.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479772|gb|EAA16509.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 579

 Score =  213 bits (542), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/331 (38%), Positives = 191/331 (57%), Gaps = 27/331 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ + 
Sbjct: 23  LMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYF-KY 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L P+   R
Sbjct: 82  DVFMVINITDIDDKIIKRSEEEKVNF------TELARKWEYEFWEDMKSLNVLLPSSITR 135

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
            + ++ ++I  I+ II + +AY  +   + FD  +    PN+  ++R +    K  T++ 
Sbjct: 136 VSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNH-FYARMEPMSVKDETKIL 194

Query: 181 E--------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           E          +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGNVLD 254

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +L
Sbjct: 255 IHSGGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKSML 314

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
                  + + A  IR+  L+  +   ++++
Sbjct: 315 -------KKYTANQIRILFLLNKWDSFMNYS 338


>gi|68536033|ref|YP_250738.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|123761878|sp|Q4JVN7|MSHC2_CORJK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2;
           Short=L-Cys:GlcN-Ins ligase 2; AltName: Full=Mycothiol
           ligase 2; Short=MSH ligase 2
 gi|68263632|emb|CAI37120.1| cysS1 [Corynebacterium jeikeium K411]
          Length = 415

 Score =  213 bits (542), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 133/389 (34%), Positives = 203/389 (52%), Gaps = 34/389 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+T +  +   + I    + MYVCG T YD  H+G+A   + FD+++R LR     
Sbjct: 18  QLRLYDTADDVVKPVE-IPAGEVGMYVCGITPYDSTHLGHAATYLTFDLIHRYLRA--AG 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITD+DD + ERA ++   +   D    + +     F  D   LA + P    
Sbjct: 75  HGVHYVQNITDVDDPLFERAERD--GVDWQD----LGTSQIDLFRSDMEDLAVIPPRDYI 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            A   I ++I ++  ++  G AY+   +    I  D + +P +G  SR   DEQ+M    
Sbjct: 129 GAMESIDEVIEMVAKLLEVGAAYQLEGDEYPDIYADYTFLPQFGYESR--YDEQQMAEFF 186

Query: 180 ------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 PE+  K++P D +LW+     EP W+SP+G GRPGWHIECSA++ + LG  F I
Sbjct: 187 AERGGDPERPGKRHPMDALLWRAHREGEPKWDSPFGPGRPGWHIECSAIAVNRLGAPFAI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE     +  A  +++ A+ ++H G + L+G KMSKS GN + ++ L  
Sbjct: 247 QGGGSDLRFPHHEFSATHAEAAHGVDRMAHHYVHTGMIGLDGTKMSKSLGNLVFVSRLTA 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDPA-- 350
                    PA  IRL +   HYR+  D+T   L  AE  L+ W    +T    +D A  
Sbjct: 307 AGHE-----PA-AIRLGVYAGHYRQDRDWTNDVLAHAEHRLASWRAALATGSTTLDEARE 360

Query: 351 ----VLSALYNDLNTVSAIQALHKLARES 375
               V   L NDL+T +A++AL   A ++
Sbjct: 361 LVATVRGHLANDLDTAAALEALDDWAADT 389


>gi|82236042|sp|Q6DJ95|SYCM_XENTR RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|49522960|gb|AAH75287.1| albumin [Xenopus (Silurana) tropicalis]
          Length = 572

 Score =  213 bits (541), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 130/330 (39%), Positives = 184/330 (55%), Gaps = 22/330 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN+L R+       DP+    Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 55  IKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILLKVFGID 114

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
               V  +TDIDDKII+RA++      +N +   +     Q F +D T L  L PT   R
Sbjct: 115 -TVVVMVVTDIDDKIIKRAKE------LNISPVALARTYEQDFKQDMTALKVLPPTVYMR 167

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
            T +IPQ+I  I++II +G+AY  +   + FD  SI   YG F+    D           
Sbjct: 168 VTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGERYGKFNDSFSDTASESA----S 223

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W SPWG+GRPGWHIECS ++S   GK  DIH GG+DL F
Sbjct: 224 QDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGIDLAF 283

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQ     +  +  N ++H G L+L+G   KMSKS  N++T+ E L       +
Sbjct: 284 PHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLRNYLTVKEFL-------K 336

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           S+     R+  L + Y+  ++++   + +A
Sbjct: 337 SFSPDQFRMFCLRSKYKSAVEYSNGSMHDA 366


>gi|300855265|ref|YP_003780249.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300435380|gb|ADK15147.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 471

 Score =  212 bits (540), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 232/472 (49%), Gaps = 47/472 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+ RK  EF  ++   + +Y CGPTVY++AHIGN R  I  D+L +   Y  G   V
Sbjct: 5   VYNTMSRKKEEFVPVNEGKVGIYTCGPTVYNYAHIGNLRTYIFEDILKKAFEY--GHYKV 62

Query: 67  TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +V NITD+          +DK+   A +E      N  +  I       F +D  +L  
Sbjct: 63  KHVMNITDVGHLQSDADTGEDKMQIGAERE------NKTVWEIAKFYENAFFEDCHKLNI 116

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P    +AT+HI  MI +I+ +   G+ Y +   + ++     +Y   +   ++E + G
Sbjct: 117 RKPDIVCKATDHIQDMIDIIKTLEKKGYTYTSKGNVYYEIDKFKDYNKLANLSMEELEAG 176

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            R+    +KKNP DF+LW  ++  +     W SPWG+G PGWHIECSAMS  YLG   DI
Sbjct: 177 ARIDVDENKKNPLDFVLWFTNSKFKDQIMQWNSPWGKGFPGWHIECSAMSIKYLGDRIDI 236

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+D I  HH NEIA+S  A    K  N W+H  FL L   KMSKS G+F+T+++ +E
Sbjct: 237 HCGGVDHIPVHHTNEIAES-EAVLGHKWVNYWMHGEFLVLSDGKMSKSKGDFLTLSK-IE 294

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------S 341
            + F    +     R   L + YR+ + F+   L +A++   K  +              
Sbjct: 295 KEGFSPMDY-----RYFCLQSRYRKQLMFSFDALRQAQLAYKKLKEKVADIVSNVKENER 349

Query: 342 TSKGIIDP---AVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHILGIEVC 397
             K +++         + +DLN  +A   L ++ +++   N +   +  +   +  +++ 
Sbjct: 350 ADKELVNKYKNKFQEKISDDLNIPNAFTVLFEVIKDNELTNKEKSLLIESFDTVFSLDLL 409

Query: 398 KE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           K    +L K  S  I++L+ ER      K +  AD IR +L+S G  + D K
Sbjct: 410 KSNNHNLEKLDSEDIKRLICERNDARNHKDWHKADVIRDELKSMGIDIIDSK 461


>gi|68063221|ref|XP_673620.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491605|emb|CAI02493.1| hypothetical protein PB300790.00.0 [Plasmodium berghei]
          Length = 386

 Score =  212 bits (540), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 180/301 (59%), Gaps = 20/301 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+   
Sbjct: 23  LMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYFKYD 82

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L P+   R
Sbjct: 83  -VFMVINITDIDDKIIKRSEEEKVNF------TELARKWEYEFWEDMKSLNVLLPSSITR 135

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
            + ++ ++I  I+ II + +AY  +   + FD  +    PN+  ++R +    K  T++ 
Sbjct: 136 VSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNH-FYARMEPMSVKDETKIL 194

Query: 181 E--------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           E          +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVLD 254

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITIN++ 
Sbjct: 255 IHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITINDMF 314

Query: 293 E 293
           +
Sbjct: 315 K 315


>gi|301108884|ref|XP_002903523.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262097247|gb|EEY55299.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 678

 Score =  212 bits (540), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 134/375 (35%), Positives = 191/375 (50%), Gaps = 48/375 (12%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           ++ P+ ++ Y CGPTVYD AH+G+AR  +  D+L R+     G   V  V  +TD+DDKI
Sbjct: 45  SVTPNILKWYACGPTVYDKAHLGHARAYVSQDILRRVAERTGGYN-VQLVMGVTDVDDKI 103

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           I+RA+++      N +   +  +  QQF  D  RL    PT   R + H+P+++  I+ I
Sbjct: 104 IKRAKEQ------NVSFHTLAWEQEQQFFADMARLYVKPPTAITRVSEHLPEIVKYIEEI 157

Query: 140 ILHGHAYEA--NNEIIFDTSSIPN-YGSFSRRKI---DEQKMGTRVPEKYH--------- 184
              G AY+A   + + F+T  + + YG    R+    DEQ + T                
Sbjct: 158 QHKGFAYQAVDGSGVYFNTRQLGDKYGKLDPRRQTQRDEQ-LQTEAEAAVEESDVAEEEE 216

Query: 185 --KKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             K++P DF LWK +  P EP W SPWG GRPGWHIECSAM+ H LG   D+H GG+DL 
Sbjct: 217 KVKRDPRDFALWKAAKEPDEPAWPSPWGLGRPGWHIECSAMTHHVLGDRLDVHTGGVDLR 276

Query: 242 FPHHENEIAQ--------SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           FPHH NEIAQ         C  D  EK  N ++H G L + GRKMSKS  NFI++ + L 
Sbjct: 277 FPHHNNEIAQCEAHNHGPQCGHD--EKWCNHFVHFGHLYIRGRKMSKSLKNFISVRDFL- 333

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                     A   RL  L   YR  + ++  R+ +AE    +       +G     V  
Sbjct: 334 -----AEGHTADHFRLFCLQFKYRASLVYSEDRVRDAEATAGRL------RGFFRSVVAY 382

Query: 354 ALYNDLNTVSAIQAL 368
              +D+++ S  + L
Sbjct: 383 GSGHDMSSSSHTETL 397


>gi|222478729|ref|YP_002564966.1| cysteinyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451631|gb|ACM55896.1| cysteinyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 497

 Score =  212 bits (539), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/309 (37%), Positives = 165/309 (53%), Gaps = 29/309 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + + +TL  +  EF A    ++ +YVCG TV D  H+G+AR     DVL+R L +   +
Sbjct: 2   SLVVTDTLADERVEFTA--DGDVTLYVCGLTVSDDPHLGHARLWFHADVLHRWLDHVGYD 59

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR-LACLAPTHQ 122
             V +V N+TD+++KI  R  +        D     T+        D  R L  L     
Sbjct: 60  --VRHVENVTDVNEKITARIGERDAWTDERDVAETFTATTF-----DAMRGLNLLRAEVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+P+++ L++ +I  G+AYE+N  + FD ++  +YG  S + + + +      E+
Sbjct: 113 PRVTEHVPEIVDLVETLIEKGYAYESNGSVYFDVTAFDDYGKLSNQNVQDLEAQGEPDER 172

Query: 183 YHKKNPADFILWKRS------------------TPMEPGWESPWGRGRPGWHIECSAMSS 224
             K+NP+DF LWK                    TP    W SPW  GRPGWH+ECSAMS+
Sbjct: 173 SEKRNPSDFALWKADGVSETAAREHAKHDHGDETPSGEIWNSPWSEGRPGWHVECSAMST 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +LG   DIH GG DL+FPHHENEIAQS  A   E  A  W+H G L +EG KMS S GN
Sbjct: 233 THLGDTLDIHMGGRDLVFPHHENEIAQSEAA-TGETFARHWLHVGLLAMEGEKMSSSIGN 291

Query: 285 FITINELLE 293
           F T+ + L+
Sbjct: 292 FWTVPDALD 300


>gi|294507027|ref|YP_003571085.1| Cysteinyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343355|emb|CBH24133.1| Cysteinyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 569

 Score =  211 bits (538), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 162/532 (30%), Positives = 240/532 (45%), Gaps = 101/532 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            ++YNTL  +    + I+  ++R Y CGPTVY +AHIGN R  +  D++ R       + 
Sbjct: 59  FRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIGWD- 117

Query: 65  CVTYVRNITDI-----DDKI-------IERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            VT V NITD+     DD +       ++RA +       N  I  +    T+ F++D  
Sbjct: 118 -VTNVSNITDVGHLTQDDLVDPGGEDKMQRALEREGERFAN--IYDLARHYTEAFLEDWG 174

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
            L    P  +PRAT H+   +  +  ++   HAY  +  + F   S+ +YG  S     +
Sbjct: 175 ALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGNTEAQ 234

Query: 173 QKMGTR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           Q   T   V E   K++P DF LWK        W SPWG G PGWHIECS M   YLG  
Sbjct: 235 QLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQYLGDR 294

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+H GG DLIFPHHE EIAQ+       +  N W+H  FL +EG KMSKS GNF  + +
Sbjct: 295 FDLHTGGEDLIFPHHECEIAQNQSL-AGHQVVNYWVHTRFLQVEGEKMSKSKGNFYIVRD 353

Query: 291 LLETKKFGGRSWPAP------------------VIRLAMLMTHYREPIDFTVQRLTEAEI 332
           L+          P P                   +R A++   YR+P +FT+  L  A  
Sbjct: 354 LIA---------PGPDDDHVPDSVREQEGVDPLALRYALMQGQYRKPFNFTLDTLHTAAR 404

Query: 333 LLSKWPQTSTSK-------------------GIIDPAVLSALYNDLNT----------VS 363
            + ++ Q +  +                   G I    L A+ +DLNT          V 
Sbjct: 405 HVRRY-QDAAERVDAALAADADGPDELGGRLGPIYDRTLEAMCDDLNTPAATAAALDGVK 463

Query: 364 AIQALHKLARESTKN-HDLLPIFNASAHILGIEVCKEH--------------LNKNISIA 408
           AI+   +L   + ++  + L   NA   +LG+ V  EH                 ++S +
Sbjct: 464 AIEQTDRLNGATARSARNWLDRTNA---LLGV-VEPEHEADQRTDAGSENGLAPTHLSDS 519

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           I+ L+++R       +++ AD IR  LE+ G  + D   PD     T W+++
Sbjct: 520 IDTLLEDREAARADGEYARADAIRDTLEALGIEVMD--TPDG----TEWERQ 565


>gi|326386996|ref|ZP_08208606.1| cysteinyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208177|gb|EGD58984.1| cysteinyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 485

 Score =  211 bits (538), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/348 (36%), Positives = 182/348 (52%), Gaps = 25/348 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + ++N+L R+   FQ + P   R+Y CGPTVY++ HIGN R  +  DVL R L Y  G
Sbjct: 5   RPLVLFNSLTRQSEPFQPVHPGEARVYSCGPTVYNYPHIGNMRAYVFADVLGRTLTYK-G 63

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            K +T+V NITD+    DD      + E  +     +I  I    TQ +  D   L    
Sbjct: 64  YK-LTHVINITDVGHLTDDADDGEDKMEKAAAQGAQSIWDIARHYTQAYWADIAALNIRQ 122

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P     AT++IPQMI   + I    H YE    + FD  S+ +YG  +R   +E +   R
Sbjct: 123 PAQWSIATDYIPQMIAFAEKIA-DKHCYELPTGLYFDVGSVADYGRLARATTEEGE--GR 179

Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           + +   K++ ADF +W+++ P E     W+SPWGRG PGWH+ECS MS   LG  FDIH 
Sbjct: 180 IEDVEGKRHKADFAIWRKTPPGEKRQMEWDSPWGRGAPGWHLECSVMSGALLGFPFDIHT 239

Query: 236 GGLDLIFPHHENEIAQSC---CADRIEKTAN----IWIHNGFLNLEGRKMSKSNGNFITI 288
           GG+D    HH NEIAQ+    CA  +   AN    +W+HN FL     KMSKS+G F+ +
Sbjct: 240 GGIDHREIHHPNEIAQNQAFRCAGSLTDPANSGARMWLHNNFLVERSGKMSKSSGEFLRL 299

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
             L++      R +     R+  L  HYR  ++F+ + L  A   L +
Sbjct: 300 QLLID------RGYHPLAYRMMCLQAHYRSELEFSWEGLGAALTRLKR 341


>gi|303236112|ref|ZP_07322714.1| putative cysteine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483694|gb|EFL46687.1| putative cysteine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 310

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/290 (42%), Positives = 165/290 (56%), Gaps = 24/290 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL R+   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++  G
Sbjct: 2   QNLVIYNTLHRQKERFQPIAAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLQHI-G 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
            K V YVRNITD+          DDKI ++AR E    P+      I    T ++     
Sbjct: 61  YK-VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE-PME-----IAQFYTNRYHNAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRK 169
            L  L+P+ +P AT HI +   L++ I+ +G+AYE+N  I FD +       YG  S R 
Sbjct: 114 MLNVLSPSIEPHATGHIIEQEELVKEIMANGYAYESNGSIYFDVTKYDKDHKYGRLSGRN 173

Query: 170 IDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           + +    +R +     K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 LTDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           G  FDIHGGG+DL+FPHHE EIAQ+  A + +     W+HN  + + G+K
Sbjct: 234 GNHFDIHGGGMDLVFPHHECEIAQA-VASQGDDMVKYWMHNNMITINGKK 282


>gi|297198535|ref|ZP_06915932.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sviceus ATCC 29083]
 gi|197716199|gb|EDY60233.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sviceus ATCC 29083]
          Length = 409

 Score =  211 bits (537), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 133/386 (34%), Positives = 209/386 (54%), Gaps = 38/386 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T    +    ++DP  + R+YVCG T YD  H+G+A     FD++ R+  +  
Sbjct: 17  RDLRIHDTATGGLV---SLDPGPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI--SIITSKNTQQFVKDTTRLACLAP 119
            ++ V YV+N+TDIDD ++ERA +        D+I  + +  K T  F +D T L  L P
Sbjct: 72  TKRQVHYVQNVTDIDDPLLERAER--------DSIDWAALAEKETVLFREDMTALRMLPP 123

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQ 173
            H   A   IP ++ L++ +   G AYE   +  F   S PN+G  S       R +  +
Sbjct: 124 RHYIGAVEAIPGIVPLVERLRDAGAAYELEGDTYFSVESDPNFGKVSNLDAAAMRLLSAE 183

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFD 232
           + G   P++  KKNP D +LW  +   EP W+ +  GRGRPGWHIEC A++  +LG  FD
Sbjct: 184 RGGD--PDRPGKKNPLDPMLWMAAREGEPSWDGASLGRGRPGWHIECVAIALDHLGMTFD 241

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L 
Sbjct: 242 VQGGGSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSQL- 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGI 346
             ++ G    PA  IRLA+L  HYR   ++T Q L +A   L +W      P   +++ +
Sbjct: 301 --RREGVD--PA-AIRLALLAHHYRADWEWTDQVLQDAVDRLGRWRAAVSRPDGPSAEEL 355

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLA 372
           ++  +  AL NDL+  +A+ A+ + A
Sbjct: 356 VE-EIREALANDLDAPTALTAVDRWA 380


>gi|213965593|ref|ZP_03393787.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium amycolatum SK46]
 gi|213951752|gb|EEB63140.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium amycolatum SK46]
          Length = 451

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/379 (32%), Positives = 208/379 (54%), Gaps = 40/379 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T ++K+++ +A       MYVCG T YD  H+G+A   + FD++YR L       
Sbjct: 42  LRLYDTADQKVSQVEA--GPEATMYVCGITPYDATHLGHAATYLTFDLIYRQL--LDNGH 97

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+NITD+DD + ERA ++       D   + TS+    F  D   L+ + P     
Sbjct: 98  SVHYVQNITDVDDPLFERAERDGV-----DWRELGTSQ-IDLFRSDMENLSVIPPRDYIG 151

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYG---SFSRRKIDE---QK 174
           A   + +++ +++ ++ +G AY+  N+    + F  S+  N+G   ++S  ++ E   ++
Sbjct: 152 AMESVDEVVDMVEKLLENGSAYQLTNDEYPDVYFRKSATENFGYESNYSAEQMAEFFAER 211

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G   P++  K+NP D ++W+ + P EP WE+P+G GRPGWHIECSA++++ LGK FDI 
Sbjct: 212 GGD--PDRPGKENPLDALVWRAARPGEPSWEAPFGAGRPGWHIECSAIATNRLGKSFDIQ 269

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L+  
Sbjct: 270 GGGSDLAFPHHEFSAAHAEAATGCARMARHYVHAGMIALDGVKMSKSLGNLVFVSKLVAA 329

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
                       IR+ +  +HYR   D++ + L  A+  L  W       +T+T +  + 
Sbjct: 330 GV------DPSAIRIGVFASHYRSDRDWSDEVLEAAKARLEAWRAACESTKTATDEKAVR 383

Query: 349 PA------VLSALYNDLNT 361
            A      V ++L NDL+T
Sbjct: 384 EAAALVADVRASLANDLDT 402


>gi|219684162|ref|ZP_03539106.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672151|gb|EED29204.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 480

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 158/494 (31%), Positives = 238/494 (48%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E      +N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTKDFSELANF--ANVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F KD  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISKFFTEAFFKDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-IDEQ 173
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +    ID+ 
Sbjct: 113 NVVYPDKVLIASKHIPNMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
              +RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDP 349
           L E      +++     R   L +HYR  + F+   L  ++I       + S     +DP
Sbjct: 292 LEE------QNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASLDP 345

Query: 350 AVLSAL---------------YN--------DLNTVSAIQALHKLARES----TKNHDLL 382
           A L+ L               Y+        DLN    +  L ++ +           L 
Sbjct: 346 ADLNMLNKDLKNFGFSAEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLRLA 405

Query: 383 PIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            IF+    + L  E+ K+  N N+ +   ++ L++ER I    K F  AD IR     KG
Sbjct: 406 FIFDEIMSLNLREEILKKSENHNVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKG 465

Query: 440 FILEDYKNPDNGQR 453
           F+L D K     +R
Sbjct: 466 FVLIDTKEGTKVKR 479


>gi|195380357|ref|XP_002048937.1| GJ21318 [Drosophila virilis]
 gi|194143734|gb|EDW60130.1| GJ21318 [Drosophila virilis]
          Length = 566

 Score =  211 bits (536), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 187/338 (55%), Gaps = 24/338 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYN   R        +P  +  Y CGPTVYD  H+G+A   +  D++ R+LR ++   
Sbjct: 60  IRIYNHSVRGKVPLVLRNPQMVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDHFKYN 119

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT + NITD+DDKII+R+R+        + + +  + + + F ++ T L    P  +  
Sbjct: 120 LVTAM-NITDVDDKIIKRSRETG-----RNWLELAHAYDAE-FKENMTWLNVKPPNLRAH 172

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + +IP +   I  ++++  AY A +N + FD S   NYG     K+++         + 
Sbjct: 173 VSANIPVIQRFIDQLLVNKQAYVAQDNSVYFDVSKYANYG-----KLEKISKEAHAVAEM 227

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+N ADF LWK +    EP W + WG  GRPGWHIECSA++S + G   D H GGLDL 
Sbjct: 228 GKRNAADFALWKAQKEEHEPSWPASWGGAGRPGWHIECSAIASMFFGNKVDFHAGGLDLR 287

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQ C   + ++  N W+H G L+L+G  +KMSKS GN +T+ +LL+      
Sbjct: 288 FPHHENEEAQCCAHFKTDQWVNYWLHTGQLHLQGEEQKMSKSLGNTVTVEQLLQ------ 341

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
             + A   R+A L+++YR  + ++ Q +  A   L K+
Sbjct: 342 -KYTADEFRMACLLSNYRNAMQYSDQLMLTARQTLRKF 378


>gi|196006167|ref|XP_002112950.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
 gi|190584991|gb|EDV25060.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
          Length = 532

 Score =  211 bits (536), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/373 (35%), Positives = 188/373 (50%), Gaps = 28/373 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN+L                 Y+CGPTVYD  H+G+A   + FD++ R++   +   
Sbjct: 37  IKVYNSLTNSKVSLILPQDKLATWYMCGPTVYDSPHLGHASSYVKFDIIRRIMTDLFDID 96

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V  ITDIDDKI++RA               +  K  ++F++D   L  L  T   R
Sbjct: 97  IVM-VMGITDIDDKIVQRAADTKT------GFRDLARKYEKEFLEDMECLNVLRATRVTR 149

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSF--SRRKIDEQKMGTRVP 180
            T HI  +I  I+ I  HG+AY+ ++  + F T    + YG    SR+ I +        
Sbjct: 150 VTEHIDHIIKFIEKIFQHGYAYKTSDGSVYFYTEKYGDRYGKLAPSRQTIHKSIDKATDS 209

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           EK   +   DF LWK +   EP W+SPWG GRPGWHIECSAMSS   G   DIH GG+DL
Sbjct: 210 EKISDR---DFALWKAAKADEPCWQSPWGSGRPGWHIECSAMSSAIFGNQLDIHTGGIDL 266

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQ     +I +  N ++H G L++   KMSKS  NF+TI + L        
Sbjct: 267 LFPHHENEIAQCEAYHQINQWTNYFLHTGHLHIAKEKMSKSLRNFVTIKDYLNLN----- 321

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVLSALYNDL 359
                  R   L++ YR P ++      +AE++  K+    + +K  +D ++ S +    
Sbjct: 322 --SPDQFRTLCLLSKYRSPTEYNSDIFKKAEVVHQKFSSYINDAKAYVDGSINSLI---- 375

Query: 360 NTVSAIQALHKLA 372
              S  + L KLA
Sbjct: 376 --ASESEILEKLA 386


>gi|51598852|ref|YP_073040.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
 gi|61216166|sp|Q660S3|SYC_BORGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51573423|gb|AAU07448.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 480

 Score =  211 bits (536), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 160/494 (32%), Positives = 239/494 (48%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E      S++++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTKDFSELANF--SDVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F KD  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISKFFTEAFFKDCKKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +I+ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NVVYPDKVLIASKHIPNMIEVIKILEEKKFTYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MG-TRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M  +RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MAFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS+GNFIT+  
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSHGNFITVKG 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDP 349
           L E      +++     R   L +HYR  + F+   L  ++I       + S     +DP
Sbjct: 292 LEE------QNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASLDP 345

Query: 350 AVLSAL---------------YN--------DLNTVSAIQALHKLARES----TKNHDLL 382
           A L+ L               Y+        DLN    +  L ++ +           L 
Sbjct: 346 ADLNMLNKDLKNFGFSIEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLKLA 405

Query: 383 PIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            IF+    + L  E+ K+  N NI I   ++ L++ER I    K F  AD IR     KG
Sbjct: 406 FIFDEIISLNLREEILKKSENHNIVIDENMKILLEERRIAKCEKNFKRADEIRDFFAKKG 465

Query: 440 FILEDYKNPDNGQR 453
           F+L D K     +R
Sbjct: 466 FVLIDTKEGTKVKR 479


>gi|269114835|ref|YP_003302598.1| Cysteinyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322460|emb|CAX37195.1| Cysteinyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 401

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 147/427 (34%), Positives = 217/427 (50%), Gaps = 40/427 (9%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R Y+CGPTVY++ HIGN RP++ FD++ R  R   GE  V ++ NITDIDDKII +A+QE
Sbjct: 3   RYYLCGPTVYNYPHIGNLRPIVSFDLMIRAQRQL-GED-VYFLHNITDIDDKIIAKAKQE 60

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                 N     I+S     ++      +   P    R T+ +  M   IQ++I  G AY
Sbjct: 61  ------NKTEKEISSFYEAYYLNLFKLFSIEMPNKIVRVTDSLNDMYEYIQSLIEKGAAY 114

Query: 147 EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE---KYHKKNPADFILWKRSTPMEP 202
           + N  + FD     + YG     KI  QK+   + +   +  K++P DF LWK +T    
Sbjct: 115 QVNGNVYFDVLKFKDVYG-----KISNQKLANLISDSSNEVDKRSPYDFALWKDTTE-GI 168

Query: 203 GWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
            ++SP+G GRPGWH ECS   + Y  GK  DIHGGG+DLIFPHHENE  Q    +R +  
Sbjct: 169 KFQSPFGLGRPGWHTECSCFINKYFEGKQLDIHGGGIDLIFPHHENENIQHFAINR-QDI 227

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
           A  WIH G LN + +KMSKS GN I   E L       +++ A   +L ML T Y +PI+
Sbjct: 228 AKDWIHFGTLNYKNQKMSKSIGNIIYAEEFL-------KNYSADTYKLLMLSTSYSKPIN 280

Query: 322 FTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
            T + L   +  ++         Q    K  +D  ++ ++  +++ +    A  +L    
Sbjct: 281 ITDELLASLQKQINNIEAHFNKSQLEDIKYTLDKQIIDSILKNVSNLDFSLAFKQL---- 336

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
             N  L    N        +V    L +N +S   ++L ++  IL + K++  AD IR  
Sbjct: 337 --NEQLKSPLNYGNAFFVFKVLGFKLVENKVSNDDKELYRKWNILKEQKQYDKADEIRNI 394

Query: 435 LESKGFI 441
           L++K  I
Sbjct: 395 LKTKRLI 401


>gi|254385070|ref|ZP_05000404.1| cysteinyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194343949|gb|EDX24915.1| cysteinyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 409

 Score =  210 bits (535), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 134/381 (35%), Positives = 201/381 (52%), Gaps = 32/381 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +KI++T  +         P  + R+YVCG T YD  HIG+A     FD++ R+  +  
Sbjct: 17  RDLKIHDTATQGTITLA---PGPVARIYVCGITPYDATHIGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERALRD------GQDWTELAERETSLFREDMTALRMLPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKM 175
              A   IP ++ L++ +   G AYE + +I F   S PN+G  S       R +  ++ 
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDIYFSVESDPNFGQVSHLDAQAMRLLSAERG 185

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G   P++  KKNP D +LW  + P EP W+ +  GRGRPGWHIEC A++  +LG  FDI 
Sbjct: 186 GD--PDRAGKKNPLDPMLWMAARPGEPSWDGASLGRGRPGWHIECVAIALDHLGMGFDIQ 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L   
Sbjct: 244 GGGSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSAL--- 300

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDPAVL- 352
           ++ G    PA  IRLA+L  HYR   ++T + L EA   L +W    S   G+   A++ 
Sbjct: 301 RRAGVD--PA-AIRLALLSHHYRADWEWTDEVLAEAVARLERWRAAVSRPDGLPADALVE 357

Query: 353 ---SALYNDLNTVSAIQALHK 370
               AL NDL+   A+ A+ +
Sbjct: 358 EIREALANDLDAPGALAAVDR 378


>gi|224042836|ref|XP_002190645.1| PREDICTED: cysteinyl-tRNA synthetase 2, mitochondrial (putative)
           [Taeniopygia guttata]
          Length = 652

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/307 (40%), Positives = 176/307 (57%), Gaps = 22/307 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y CGPTVYD AH+G+A   + FD++ R++  ++G + V  V  ITDIDDKII+RA + + 
Sbjct: 145 YSCGPTVYDHAHLGHACSYVRFDIIRRIMTRFFGIE-VIMVMGITDIDDKIIKRANEMNI 203

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE- 147
           S PI  A++ I  ++   F +D   L  L PT   R T++IPQ+I  I+ I+  G AY  
Sbjct: 204 S-PI--ALARIYEED---FKQDMAALKVLPPTVYMRVTDNIPQIISFIETIMSSGQAYAT 257

Query: 148 ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           +   + FD  S    YG  +    D Q       +++ K    DF LWK + P E  W S
Sbjct: 258 SQGNVYFDVKSWGRRYGVLTAINPDTQDEAVDSDKRHGK----DFALWKAAKPQELSWNS 313

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG+GRPGWHIECS +SS   GK  DIH GG+DL FPHHENEIAQ     + E+  N ++
Sbjct: 314 PWGKGRPGWHIECSTISSAVFGKQLDIHTGGIDLAFPHHENEIAQCEVYHQCEQWGNYFL 373

Query: 267 HNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           H+G L+++G   KMSKS  N+ITI + L       +   +   R+  L   Y   I+++ 
Sbjct: 374 HSGHLHVKGSQEKMSKSLKNYITIKDFL-------KKCSSDQFRMFCLRGRYSSAIEYSE 426

Query: 325 QRLTEAE 331
           + + +A+
Sbjct: 427 ESMEDAK 433


>gi|224534810|ref|ZP_03675382.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514058|gb|EEF84380.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 480

 Score =  210 bits (535), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 159/494 (32%), Positives = 231/494 (46%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVYD+AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTKNFSELTNFN--NVKVYACGPTVYDYAHIGNFRTYIFGDLLIKALRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F KD  +L
Sbjct: 60  -VDYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------HEISEFFTEAFFKDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +I+ +      Y +N  + FDTS   +YG  +   +  + 
Sbjct: 113 NIVYPNKVLVASKHIPIMIEVIKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLINKD 172

Query: 175 MG-TRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M  +RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVED 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDP 349
           L E      +++     R   L +HYR  + F++  L  + I       + S     +DP
Sbjct: 292 LEE------QNFSPLDFRYLCLTSHYRSQLKFSLNNLQASRIARENMINRLSYFYASLDP 345

Query: 350 AVLSALYNDLNTVSA-------------------IQALHKLARESTKNHDLLPIFNASAH 390
             LS L  DL   +                    I     L  E  K+ +L  +      
Sbjct: 346 VDLSMLNKDLKNFAFSAEKEYYDSFIERVSFDLNISQGLALLWEIIKSENLGLVSKLRLA 405

Query: 391 ILGIEVCKEHLNKNISIAIEK-----------LVQERLILLKMKKFSSADYIRKQLESKG 439
            +  EV   +L K I   +E            L++ER I    K F  AD IR     KG
Sbjct: 406 FIFDEVISLNLRKEILKNLENHDVVVDESMKILIEERRIAKCEKNFKRADEIRDFFAKKG 465

Query: 440 FILEDYKNPDNGQR 453
           F+L D K     +R
Sbjct: 466 FVLVDTKEGTKVKR 479


>gi|296165216|ref|ZP_06847763.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899405|gb|EFG78864.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 411

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 137/413 (33%), Positives = 214/413 (51%), Gaps = 39/413 (9%)

Query: 4   KIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++Y+T +R++   + + P S   MYVCG T YD  H+G+A   + FD++YR  ++   
Sbjct: 18  ELRLYDTSDRQV---RPVAPGSTATMYVCGITPYDSTHLGHAATYLTFDLVYR--QWLDL 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPT 120
              V YV+N+TD+DD + ERA +        D +    +  +   +F +D   L  L P 
Sbjct: 73  GHDVHYVQNVTDVDDPLFERAER--------DGVDWRELGDREVARFREDMAALRVLPPR 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYG--SFSRRKIDEQKM 175
               AT  IP+++ L++ ++  G AY  + +   + +   + P +G  S   R+   +  
Sbjct: 125 EYVAATQAIPEVVELVEKMLASGGAYVIDGDYPDVYYRADATPQFGYESGYDRETMLRLF 184

Query: 176 GTRV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           G R   PE+  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++S  +G   DI
Sbjct: 185 GERGGDPERAGKTDELDALLWRAARPGEPSWPSPFGDGRPGWHVECAAIASSRIGSGLDI 244

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ L  
Sbjct: 245 QGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTLRA 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                    PA  IRL +L  HYR    ++ Q L EA   L +W   +      D A + 
Sbjct: 305 QGVE-----PA-AIRLGLLSGHYRADRFWSPQVLEEANTRLGRWRSATGLPAGPDAADVI 358

Query: 354 A-----LYNDLNTVSAIQALHKLARESTK--NHDL-LPIFNASA--HILGIEV 396
           A     L +DLNT  A+ AL   A ++ +   HD   P   A+A   +LG+E+
Sbjct: 359 ARVRQYLADDLNTPKALAALDGWATDALEYGGHDTDAPRLVATAIDALLGVEL 411


>gi|269124814|ref|YP_003298184.1| cysteine--tRNA ligase [Thermomonospora curvata DSM 43183]
 gi|268309772|gb|ACY96146.1| Cysteine--tRNA ligase [Thermomonospora curvata DSM 43183]
          Length = 372

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/348 (35%), Positives = 178/348 (51%), Gaps = 23/348 (6%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
            + RMYVCG T YD  H+G+AR  +  DV  R+LR+      V   RN+TD+DD ++ RA
Sbjct: 21  GHARMYVCGITPYDTTHLGHARTFVWADVAARVLRH--AGNTVKVCRNVTDVDD-VLTRA 77

Query: 84  RQEHPSIPINDAISIITSKNTQQ--FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
            Q   S P +   ++      QQ  F +D   L   + THQPRA N+I + I L Q ++ 
Sbjct: 78  AQRAGS-PYDSFAAV------QQYYFEQDMAALGVHSVTHQPRAHNYIRETIALAQALLD 130

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
            GHAY     + F  + +P      R+  +D        PE   K +P D  LW+ S   
Sbjct: 131 LGHAYLREGAVYFRGAHVPGQAGLDRQTALDLLAEYGDDPEDPRKDDPFDIALWRPSEAG 190

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           EP W SPW  GRPGWH EC++M+    G   D+H GG DL FPHH  E A +     +  
Sbjct: 191 EPAWPSPWSAGRPGWHAECASMALAIFGPALDLHAGGADLRFPHHAYESALAEAMTGVRP 250

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  W+H G ++ +G KM+KS GN + + +LL+         PA V+RLA+L T + +  
Sbjct: 251 FARAWLHVGMVSKDGAKMAKSTGNLVFVADLLKEH-------PASVLRLALLSTPWAQEW 303

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYNDLNTVSAI 365
            +T   L+ A   L +    +   G     D AV +AL +DLN  +A+
Sbjct: 304 HYTPGDLSAAAARLDRLHTAAGRPGSSPAADEAVTAALLDDLNVDAAL 351


>gi|326436975|gb|EGD82545.1| cysteinyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 528

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 126/353 (35%), Positives = 180/353 (50%), Gaps = 41/353 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIR------MYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           ++++N L R++   + ++P+ +        Y CGPTVYD +HIG+A     FD+L R++ 
Sbjct: 16  LRVFNGLTRQL---ETVNPAGVNERGWLTWYQCGPTVYDHSHIGHAVCFQRFDILRRVME 72

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            ++G   V  V  +TDIDDKII +A  E            I  +  + F +D   L  L 
Sbjct: 73  RHFGMH-VLQVWGMTDIDDKIIRKAHTEQRHW------QDIARQYEESFFQDMAALNILP 125

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI--PNYGSFSRRKIDEQKMG 176
           P H  R T HI ++I  IQ I+  GHAY   + + FD  +     YG   +         
Sbjct: 126 PAHITRVTEHIDEIIEFIQGILDRGHAYVTPSGVYFDLQAFGEDKYGRLGKGVQSTAAAS 185

Query: 177 TRVPEKY----------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
           TR               HK++ ADF LWKR    +P W++P+G+GRPGWHIECSAM+S Y
Sbjct: 186 TRADADAGAAADSNDAAHKRHRADFALWKRGDAGDPTWDAPFGKGRPGWHIECSAMASKY 245

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNG 283
           LG+  DIH GG+DL++PHH NE+AQ  C       +   + W H G L     KMSKS G
Sbjct: 246 LGQHIDIHTGGIDLLYPHHTNELAQ--CESHYGHCDWVRHFW-HTGHLTTRSEKMSKSLG 302

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           N I I + L++            +R+  L + YR  I F+   +T A  LL +
Sbjct: 303 NTIAIKDFLQSHTHND-------LRMLCLQSRYRSDIAFSDSDVTAASRLLQR 348


>gi|227487324|ref|ZP_03917640.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542745|ref|ZP_03972794.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227092750|gb|EEI28062.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181511|gb|EEI62483.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 404

 Score =  210 bits (534), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 206/387 (53%), Gaps = 29/387 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+++T ++++ E      +N  + MYVCG T YD  H+G+A   + FD+  R L    G
Sbjct: 19  LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL-LANG 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V YV+NITD+DD + ERA ++       D   + TS+    F  D   L+ + P   
Sbjct: 78  HK-VHYVQNITDVDDPLFERAERDGV-----DWRELGTSQ-INLFRSDMEILSVIPPCDY 130

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRV 179
             A   + ++I ++Q ++  G AYE +   I+   D +    Y S   R   E+    R 
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GGG
Sbjct: 191 GDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E    
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEAGH- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPA 350
                    IRLA+   HYRE  DF+   L EAE  L++W +        + +  ++D  
Sbjct: 310 -----DPSAIRLAVFSGHYREDRDFSDAILAEAEERLARWREQLAGEVSEAGATDVVDK- 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
           + + L +DLNT  A+  L   A +  +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQ 390


>gi|320011719|gb|ADW06569.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces flavogriseus ATCC 33331]
          Length = 409

 Score =  210 bits (534), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/391 (33%), Positives = 207/391 (52%), Gaps = 36/391 (9%)

Query: 3   KKIKIYNTLER-KITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + ++I++T    +IT    +DP  + R+YVCG T YD  H+G+A     FD++ R+  + 
Sbjct: 17  RDLRIHDTATGGRIT----LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WL 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             ++ V YV+N+TD+DD ++ERA ++       +  + +  + T  F +D T L  L P 
Sbjct: 71  DTKRQVHYVQNVTDVDDPLLERAVRD------GEDWTELAERETALFREDMTALRMLPPK 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQK 174
           H   A   IP ++ L++ +   G AYE + ++ F   S P++G  S       R +  ++
Sbjct: 125 HYIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVESDPHFGEVSNLDAEAMRLLSAER 184

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G   PE+  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+
Sbjct: 185 GGD--PERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMTFDV 242

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 243 QGGGSDLAFPHHEMGASHAQVLTGEHPFAKAYVHAGMVGLDGEKMSKSKGNLVFVSALRR 302

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGII 347
                    PA  IRL +L  HYR   ++T Q L +A   L++W      P   ++  ++
Sbjct: 303 ADVD-----PA-AIRLTLLAHHYRSDWEWTDQVLADAVERLARWRAAVSRPDGLSADALV 356

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN 378
           +  V  AL +DL+T +A+ A+ + A   T  
Sbjct: 357 E-EVREALADDLDTPAALAAVDRWAELQTSG 386


>gi|260578725|ref|ZP_05846633.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603222|gb|EEW16491.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 415

 Score =  210 bits (534), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/389 (33%), Positives = 203/389 (52%), Gaps = 34/389 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+T +  +   + I    + MYVCG T YD  H+G+A   + FD+++R LR   G 
Sbjct: 18  QLRLYDTADDVVKPVE-IPAGEVGMYVCGITPYDSTHLGHAATYLTFDLIHRYLRA--GG 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITD+DD + ERA ++   +   D    + +     F  D   LA + P    
Sbjct: 75  HGVHYVQNITDVDDPLFERAERD--GVDWQD----LGTSQIDLFRSDMEDLAVIPPRDYI 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            A   I ++I ++  ++  G AY+   +    I  D + +P +G  SR    E++M    
Sbjct: 129 GAMESIDEVIEMVAKLLEVGAAYQLEGDEYPDIYADYTFLPQFGYESRYS--EEQMAEFF 186

Query: 180 ------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 PE+  K++P D +LW+     EP W+SP+G GRPGWHIECSA++ + LG  F I
Sbjct: 187 AERGGDPERPGKRHPMDALLWRAHREGEPKWDSPFGPGRPGWHIECSAIAVNRLGAPFAI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE     +  A  +++ A+ ++H G + L+G KMSKS GN + +++L  
Sbjct: 247 QGGGSDLRFPHHEFSATHAEAAHGVDRMAHHYVHTGMIGLDGTKMSKSLGNLVFVSKLTA 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDPA-- 350
                    PA  IRL +   HYR+  D+T   L  AE  L+ W    +T    +D A  
Sbjct: 307 AGHE-----PA-AIRLGVYAGHYRQDRDWTNDVLAHAEHRLASWRAALATGSTPLDEARE 360

Query: 351 ----VLSALYNDLNTVSAIQALHKLARES 375
               V   L NDL+T +A+ AL   A ++
Sbjct: 361 LVATVRGHLANDLDTAAALDALDGWAADT 389


>gi|32479379|ref|NP_862232.1| cysteinyl-tRNA synthetase [Corynebacterium striatum]
 gi|81324595|sp|Q9FB57|MSHC_CORST RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|9945792|gb|AAG03366.1| CysS [Corynebacterium striatum]
          Length = 404

 Score =  210 bits (534), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 206/387 (53%), Gaps = 29/387 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+++T ++++ E      +N  + MYVCG T YD  H+G+A   + FD+  R L    G
Sbjct: 19  LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL-LANG 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V YV+NITD+DD + ERA ++       D   + TS+    F  D   L+ + P   
Sbjct: 78  HK-VHYVQNITDVDDPLFERAERDGV-----DWRELGTSQ-INLFRSDMEILSVIPPCDY 130

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRV 179
             A   + ++I ++Q ++  G AYE +   I+   D +    Y S   R   E+    R 
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GGG
Sbjct: 191 GDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E    
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEAGH- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPA 350
                    IRLA+   HYRE  DF+   L EAE  L++W +        + +  ++D  
Sbjct: 310 -----DPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDK- 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
           + + L +DLNT  A+  L   A +  +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQ 390


>gi|66807293|ref|XP_637369.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996749|sp|Q54KR1|SYCC_DICDI RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|60465778|gb|EAL63854.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 660

 Score =  209 bits (533), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 178/312 (57%), Gaps = 24/312 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y CGPTVYD +H+G+AR  I FD++ R+++ Y G   + YV NITDIDDKII RA +   
Sbjct: 63  YACGPTVYDASHMGHARTYISFDIIRRIMKNYLGFN-IQYVMNITDIDDKIIIRANENGI 121

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
           S       S ++ K    F +D   L  L P    R T ++PQ++  ++ II +G AYE+
Sbjct: 122 SH------SDLSKKWETAFFEDMKLLNVLPPDALTRVTEYVPQIVEYVEKIISNGFAYES 175

Query: 149 NNEIIFDT---SSIPNYGSFSRRKIDEQKMG-------TRVPEKYHKKNPADFILWKRST 198
           N  + FDT   S   +YG      +  +K+        T       K++  DF LWK+S 
Sbjct: 176 NGSVYFDTVAFSKAHDYGKLEPNSVGNEKLAAEGEGSLTATSAVSEKRSGFDFALWKKSK 235

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           P EP W SPWG GRPGWHIECSAM+S  LG   DIH GG DL FPHH+NE+AQS      
Sbjct: 236 PGEPVWNSPWGEGRPGWHIECSAMASDLLGGNIDIHSGGSDLKFPHHDNELAQSEAFYGN 295

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
            +  N ++H+G L ++G KMSKS  NFITI + LE  K+  R      +R+  ++  Y +
Sbjct: 296 RQWINYFVHSGHLLIDGLKMSKSLKNFITIKQALE--KYTSRQ-----MRMFFILHKYDK 348

Query: 319 PIDFTVQRLTEA 330
            ++++ + +  A
Sbjct: 349 AMNYSPESMGYA 360


>gi|216263552|ref|ZP_03435547.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980396|gb|EEC21217.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 480

 Score =  209 bits (533), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 239/494 (48%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT  +  +E    D  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLHNTRTKDFSELTNFD--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+++ AR++  ++        I+   T+ F KD  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVVKTAREKGLTVQE------ISEFFTEAFFKDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-IDEQ 173
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +    ID+ 
Sbjct: 113 NVVYPDKVLIASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
              +RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS+GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSSGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDP 349
           L E      +++     R   L +HYR  + F++  L  ++I       + S     +DP
Sbjct: 292 LEE------QNFSPLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASLDP 345

Query: 350 AVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH----DLL 382
             L  L               Y+        DLN    +  L ++ +    +      L 
Sbjct: 346 VALGVLNKDLKNFGFSEEKEYYDSFIEKVSFDLNISQGLALLWEIIKSENLSFVSKLRLA 405

Query: 383 PIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            IF+    + L  E+ K   N ++ +   ++ L++ER I    K F  AD IR     KG
Sbjct: 406 FIFDEIMSLNLREEILKNLENHDVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKG 465

Query: 440 FILEDYKNPDNGQR 453
           F+L D K     +R
Sbjct: 466 FVLVDTKEGTKVKR 479


>gi|172039961|ref|YP_001799675.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|310947167|sp|B1VEQ2|MSHC1_CORU7 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 1;
           Short=L-Cys:GlcN-Ins ligase 1; AltName: Full=Mycothiol
           ligase 1; Short=MSH ligase 1
 gi|171851265|emb|CAQ04241.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 404

 Score =  209 bits (533), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 131/387 (33%), Positives = 206/387 (53%), Gaps = 29/387 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+++T ++++ E      +N  + MYVCG T YD  H+G+A   + FD+  R L    G
Sbjct: 19  LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL-LANG 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V YV+NITD+DD + ERA ++       D   + TS+    F  D   L+ + P   
Sbjct: 78  HK-VHYVQNITDVDDPLFERAERDGV-----DWRELGTSQ-INLFRSDMEILSVIPPRDY 130

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRV 179
             A   + ++I ++Q ++  G AYE +   I+   D +    Y S   R   E+    R 
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GGG
Sbjct: 191 GDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E    
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEAGH- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPA 350
                    IRLA+   HYRE  DF+   L EAE  L++W +        + +  ++D  
Sbjct: 310 -----DPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDK- 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
           + + L +DLNT  A+  L   A +  +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQ 390


>gi|227833074|ref|YP_002834781.1| MshC ligase [Corynebacterium aurimucosum ATCC 700975]
 gi|262182436|ref|ZP_06041857.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|310947180|sp|C3PG89|MSHC_CORA7 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|227454090|gb|ACP32843.1| MshC ligase [Corynebacterium aurimucosum ATCC 700975]
          Length = 414

 Score =  209 bits (533), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 138/430 (32%), Positives = 216/430 (50%), Gaps = 51/430 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           + +Y++ + ++     I      MYVCG T YD  H+G+A   + FD++YR LL   Y  
Sbjct: 19  LHLYDSADGEVKRLN-IKGETATMYVCGITPYDSTHLGHAATYLTFDLIYRQLLDNGY-- 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y +NITD+DD + ERA ++       D   + TS+    F  D   L+   P H  
Sbjct: 76  -KVNYAQNITDVDDPLFERAERDGV-----DWRELGTSQ-INLFRSDMELLSVFPPQHFV 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG---SFSRRKID---EQ 173
            A   I ++  ++Q ++  G AY  ++    ++     +  N+G   ++SR +++    +
Sbjct: 129 GAMEAIDEITEMVQALLDAGAAYVVDDPDYPDVYASIEATKNFGYESNYSREQMETFFAE 188

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G   PE+  K++P D ++W+     EP WESP+G GRPGWHIECSA++++ LG  FDI
Sbjct: 189 RGGD--PERPGKRDPLDALIWRAHREGEPAWESPFGPGRPGWHIECSAIATNRLGSSFDI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   A +  A  +E+ A  ++H G + LEG KMSKS GN + +++L+E
Sbjct: 247 QGGGSDLKFPHHEFSAAHAEAALGVERMAQSYVHTGMIGLEGTKMSKSLGNLVFVHKLVE 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--- 350
                        IRL +   HYRE  D++ + L  A+  L +W   S + G ++     
Sbjct: 307 AGV------DPSAIRLGVFSGHYREDRDWSDEVLHTAQERLERWRAASRNPGTVEEIKEV 360

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              V  AL  DL+T  AI  L + A ++                LG     E  +  +  
Sbjct: 361 VHNVRLALAEDLDTQRAIAVLDQWAEQA----------------LGAAEASEEASDVLRT 404

Query: 408 AIEKLVQERL 417
           A+  L+  RL
Sbjct: 405 AVNSLLGVRL 414


>gi|85858128|ref|YP_460330.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721219|gb|ABC76162.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 769

 Score =  209 bits (533), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 141/474 (29%), Positives = 234/474 (49%), Gaps = 54/474 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+ YN L R    F+ ++P  + M+ CGPT ++  HIG+ R  +V D++ R L +   E 
Sbjct: 306 IRFYNVLSRSKNFFRPVNPDKVLMHSCGPTTHEVPHIGSYRRFVVSDLIRRYLEFRGYE- 364

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NI D+ D+ I  A +E   +       + T++  + F+ D  +L        PR
Sbjct: 365 -VKHVLNIIDLADRSIRGAEREGMDL------GVYTARCEEVFLNDINKLNIKKDESYPR 417

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           A+ +   M+ L++ ++  G AYE    + FD S + +YG  S   +   + G R+  + Y
Sbjct: 418 ASENFDSMVKLVEKLVDKGFAYEKLRSVYFDISKLRDYGCLSNIDLVRVQHGRRIDLDDY 477

Query: 184 HKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K +P DF L KRST  E      +++ WG  RP WH+EC+A++ HYL   FDIH  G D
Sbjct: 478 EKDSPVDFTLLKRSTLSELKRGVFFKTRWGNVRPSWHLECAAIAQHYLADTFDIHASGSD 537

Query: 240 LIFPHHEN--EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           ++FPH EN   I ++    RI   AN WI+   + + G+KMS+S  N +T+ E LE K +
Sbjct: 538 IVFPHCENVMAIGKAATGKRI---ANYWINTELVMVGGKKMSRSLNNALTL-EDLEKKGY 593

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---ILLSKWPQ--TSTSKGIIDPAVL 352
            GR      +R  ++ +HYR+P++F+   L  A+   + L+ + Q       G  DP + 
Sbjct: 594 SGRE-----VRFFLVSSHYRKPLNFSFGALDTAKNTVLKLNGFIQRLIRLKAGEGDPDLE 648

Query: 353 SALY-----------NDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
             LY           +DLN   A+  L    ++ +           +   +L        
Sbjct: 649 QKLYDLRQGFTAAMDDDLNISGALAVLFDFVKKVSSSLAQGVLTVEQRDQVLEALKKIDD 708

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LG+   +E   + IS    +L++ R  L +  +++ AD IR++L   G ++ D
Sbjct: 709 VLGVMKFEE---EQISEEALQLMKRREALRQEGRWAQADEIRQRLLDMGVVVAD 759


>gi|194246729|ref|YP_002004368.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807086|emb|CAP18522.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 438

 Score =  209 bits (533), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 164/462 (35%), Positives = 234/462 (50%), Gaps = 50/462 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   F+ +  + I MYVCGPTVYD  H+GNARP+I F++L + L+    + 
Sbjct: 2   LKIYNTLTRKKEIFKPLYSNIINMYVCGPTVYDNIHLGNARPLIFFNMLKKYLQNLNFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y  NITDIDDKII+ A ++  +         I++K    F+    +L      + P+
Sbjct: 61  -VNYAVNITDIDDKIIKIAIEQKTTE------KFISTKYINCFLNILKQLEIENIDYFPQ 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ IP +I  I+ +I  G+AY  +  + F    I NYG    + I++ K   R      
Sbjct: 114 VTDFIPSIISYIEKLIFKGYAYINDQGVYFRVGLISNYGQLGSKIIEDLKKNNRKEFDSQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DFILWK+ T     ++SPW  GRPGWH EC  M         DIHGGG DL FPH
Sbjct: 174 KENHQDFILWKK-TKFGIKYQSPWFEGRPGWHTECVVMIKKIFNVTLDIHGGGNDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS   D     +N +IH G ++ +  KMSKS GN I + +LL       + +  
Sbjct: 233 HENELAQSIAYDG-NNLSNFFIHIGRIDYQQVKMSKSLGNVIWVKDLL-------KKFHP 284

Query: 305 PVIRLAMLMTHYREPIDF-------TVQRLTEAEILLSKWPQTSTSKGI----IDPAVLS 353
            VI+L +L  +YR+PI+F        V +  +   LL K         I    ++ +++ 
Sbjct: 285 NVIKLLILSHYYRQPINFHDSLMEQFVAKYEKINNLLQKNNFILKINNIFSNQLEISMIK 344

Query: 354 ALY----NDLNTVSAIQALHK----------LARESTKNHDLLPIFNASAHILGIEVCKE 399
             Y    +DLNT + +  + K            R S   + L+ I N    ILGI++  +
Sbjct: 345 EFYEYMNDDLNTPNVVSLIEKGLKIFHQNINFDRLSQIQNTLIFILN----ILGIKIFLK 400

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            + K I I I  L Q+     K + F  +DY RK L   GFI
Sbjct: 401 PVTKEI-IEIYHLWQKE---FKCRNFEKSDYYRKILIDLGFI 438


>gi|312139693|ref|YP_004007029.1| mycothiol ligase mshc [Rhodococcus equi 103S]
 gi|325676858|ref|ZP_08156531.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311889032|emb|CBH48345.1| mycothiol ligase MshC [Rhodococcus equi 103S]
 gi|325552406|gb|EGD22095.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 413

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 204/390 (52%), Gaps = 35/390 (8%)

Query: 5   IKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y+T +R++   + + P +  +MYVCG T YD  H+G+A   + FD++ R+LR     
Sbjct: 19  LRLYDTADRQV---RPVTPGATAKMYVCGITPYDATHLGHAATYLTFDLVNRVLRD--AG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P    
Sbjct: 74  HAVHYVQNVTDVDDPLFERADRD------GEDWVVLGMRETALFREDMEALRVLPPQDYI 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG---SFSRRKIDE---Q 173
            A   I +++ L++  +  G AY  ++    ++ F   +   +G    + R  +D    +
Sbjct: 128 GAVESIGEVVELVEKFVASGAAYVVDDPEYPDVYFRADATAQFGYESGYDRATMDHFFAE 187

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G   P +  K++P D ++W+   P EP W SP+G GRPGWHIEC+A++ + +G  FDI
Sbjct: 188 RGGD--PNRPGKRDPLDALVWRAQRPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDI 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +  A   ++ A  ++H G + L+G KMSKS GN + +++L  
Sbjct: 246 QGGGSDLIFPHHEFSAAHAESATGTDRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR- 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                G       IRL +L  HYR    +T Q L +A+  L+ W + +  +         
Sbjct: 305 -----GEGVDPAAIRLGLLSGHYRVDRPWTDQVLADAQERLALWRKAAALESAPSAEDTV 359

Query: 354 A-----LYNDLNTVSAIQALHKLARESTKN 378
           A     L +DL+T  A+ AL   AR +  +
Sbjct: 360 ARLRQHLADDLDTPKALDALDGWARRAVDH 389


>gi|326780298|ref|ZP_08239563.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces cf. griseus XylebKG-1]
 gi|326660631|gb|EGE45477.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces cf. griseus XylebKG-1]
          Length = 409

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 208/385 (54%), Gaps = 36/385 (9%)

Query: 3   KKIKIYNTLER-KITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + ++I++T    +IT    +DP  + R+YVCG T YD  H+G+A     FD++ R+  + 
Sbjct: 17  RDLRIHDTATGGRIT----LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WL 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  L P 
Sbjct: 71  DTKRQVHYVQNVTDVDDPLLERAVRD------GQDWTELAERETALFREDMTALRMLPPR 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQK 174
           H   A   IP ++ L++ +   G AY+ + +I F   + P++G  S       R +  ++
Sbjct: 125 HYIGAVEAIPGIVPLVERLRDSGAAYDLDGDIYFSVDTDPHFGEVSGLDAEAMRLLSAER 184

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G   PE+  KKNP D +LW  + P EP W+ +  G GRPGWHIEC A++  +LG  FDI
Sbjct: 185 GGD--PERPGKKNPLDPMLWMAARPGEPSWDGASLGEGRPGWHIECVAIALDHLGMGFDI 242

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 243 QGGGSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSTLRR 302

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGII 347
                    PA  +RLA+L  HYR   ++T Q L EA   L++W      P   +++ ++
Sbjct: 303 EGVD-----PA-ALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALV 356

Query: 348 DPAVLSALYNDLNTVSAIQALHKLA 372
           +  V  AL +DL++ +A+ A+ + A
Sbjct: 357 E-EVREALADDLDSPAALAAVDRWA 380


>gi|291000007|ref|XP_002682571.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
 gi|284096198|gb|EFC49827.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
          Length = 668

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 215/449 (47%), Gaps = 83/449 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           I++YN+L  +  +F   D SN I  Y CGPTVYD++H+G+AR  + FD++ R+L  Y+  
Sbjct: 29  IEVYNSLTCQKEKFILQDNSNTITWYTCGPTVYDWSHMGHARTYVGFDIVRRILEDYFNF 88

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y+ NITDIDDKII   ++   S+P               F +D  +L    PT   
Sbjct: 89  N-VIYIENITDIDDKII---KKNFLSVP---------RYYEHLFWEDMKQLQVKTPTVLV 135

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFS-------RRKID 171
           R T HI +++  IQ II +G AYE    + FD  +        YG           R +D
Sbjct: 136 RVTEHIDEVVSFIQQIIDNGFAYEEGGNVYFDVEAFQQNQKHVYGKLEPWNVNCEERLMD 195

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV- 230
            +       + + KK+  DF LWK S P EP W+S WG+GRPGWHIECSAM+ + L +  
Sbjct: 196 GEGESETEKKVFKKKSKKDFALWKTSKPGEPEWDSKWGKGRPGWHIECSAMACYALQQAA 255

Query: 231 -----------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
                       D+H GG+DL FPHH+NE+AQS       +  N ++H G L+++G  MS
Sbjct: 256 KLAGRSANDATLDVHCGGIDLKFPHHDNELAQSEAYLGSRQWVNYFLHTGHLSIDGMSMS 315

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL------ 333
           KS  NFITI + LE        + A  IR+  L   + + ++++   +  A+ +      
Sbjct: 316 KSKKNFITIRQALE-------KYTARQIRMMFLYRKFDDEMEYSETTMEYAKSIEKSFQE 368

Query: 334 -------------------LSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQAL 368
                              + KW Q       + SK  +D  V +AL N  +T+  +  L
Sbjct: 369 FFGNLKIIFRDYVTKTGKSIEKWDQADFELSETLSKSKLD--VDTALRNSFDTIKCMITL 426

Query: 369 HKLAREST-----KNHDLLPIFNASAHIL 392
             L + +      KN+  +P+     + +
Sbjct: 427 QSLIKATNTYLEKKNYPSVPLLKQVGYYV 455


>gi|541386|pir||F53402 cysteine-tRNA ligase (EC 6.1.1.16) - Bacillus stearothermophilus
           (fragment)
          Length = 221

 Score =  209 bits (532), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 100/226 (44%), Positives = 138/226 (61%), Gaps = 8/226 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   + 
Sbjct: 4   IRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDK+I+ AR+   S+P       I  +  + + +D   L C      PR
Sbjct: 63  -VTYVSNFTDVDDKLIKAARELGESVPA------IAERFIEAYFEDIQALGCKKADIHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  IQ +I  G+AYE + ++ + T   P YG  S + IDE + G R+     
Sbjct: 116 VTENIGTIIEFIQALIDKGYAYEVDGDVYYRTRKFPGYGKLSHQSIDELQAGARIEVGEK 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG V
Sbjct: 176 KDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMAGRYLGTV 221


>gi|182439633|ref|YP_001827352.1| cysteinyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|310947221|sp|B1W2Y7|MSHC_STRGG RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|178468149|dbj|BAG22669.1| putative cysteinyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 409

 Score =  209 bits (532), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 130/385 (33%), Positives = 208/385 (54%), Gaps = 36/385 (9%)

Query: 3   KKIKIYNTLER-KITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + ++I++T    +IT    +DP  + R+YVCG T YD  H+G+A     FD++ R+  + 
Sbjct: 17  RDLRIHDTATGGRIT----LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WL 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  L P 
Sbjct: 71  DTKRQVHYVQNVTDVDDPLLERAVRD------GQDWTELAERETALFREDMTALRMLPPR 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS------RRKIDEQK 174
           H   A   IP ++ L++ +   G AY+ + +I F   + P++G  S       R +  ++
Sbjct: 125 HYIGAVEAIPGIVPLVERLRDAGAAYDLDGDIYFSVDTDPHFGEVSGLDAEAMRLLSAER 184

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G   PE+  KKNP D +LW  + P EP W+ +  G GRPGWHIEC A++  +LG  FDI
Sbjct: 185 GGD--PERPGKKNPLDPMLWMAARPGEPSWDGASLGEGRPGWHIECVAIALDHLGMGFDI 242

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 243 QGGGSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSTLRR 302

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGII 347
                    PA  +RLA+L  HYR   ++T Q L EA   L++W      P   +++ ++
Sbjct: 303 EGVD-----PA-ALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALV 356

Query: 348 DPAVLSALYNDLNTVSAIQALHKLA 372
           +  V  AL +DL++ +A+ A+ + A
Sbjct: 357 E-EVREALADDLDSPAALAAVDRWA 380


>gi|225548609|ref|ZP_03769656.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370639|gb|EEH00075.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 480

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 161/501 (32%), Positives = 246/501 (49%), Gaps = 73/501 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N ADF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKADFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDA 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQRMTR 456
             KGF+L D K    G R+ R
Sbjct: 462 AKKGFVLVDTK---EGTRVKR 479


>gi|111115428|ref|YP_710046.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123341311|sp|Q0SMQ8|SYC_BORAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110890702|gb|ABH01870.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 480

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 156/494 (31%), Positives = 238/494 (48%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT  +  +E    D  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLHNTRTKDFSELTNFD--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+++ AR++  ++        I+   T+ F KD  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVVKTAREKGLTV------QEISEFFTEAFFKDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-IDEQ 173
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +    ID+ 
Sbjct: 113 NVVYPDKVLIASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
              +RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDP 349
           L E      +++     R   L +HYR  + F++  L  ++I       + S     +DP
Sbjct: 292 LEE------QNFSPLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASLDP 345

Query: 350 AVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH----DLL 382
             L  L               Y+        DLN    +  L ++ +    +      L 
Sbjct: 346 VALGVLNKDLKNFGFSEEKEYYDSFIEKVSFDLNISQGLALLWEIIKSENLSFVSKLRLA 405

Query: 383 PIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            IF+    + L  E+ K   N ++ +   ++ L++ER I    K F  AD IR     KG
Sbjct: 406 FIFDEIMSLNLREEILKNLENHDVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKG 465

Query: 440 FILEDYKNPDNGQR 453
           F+L D K     +R
Sbjct: 466 FVLVDTKEGTKVKR 479


>gi|257056227|ref|YP_003134059.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|310947214|sp|C7MWX8|MSHC_SACVD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256586099|gb|ACU97232.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 415

 Score =  209 bits (531), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/394 (31%), Positives = 206/394 (52%), Gaps = 37/394 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            + +++Y+T   +I   +   P  + +MYVCG T YD  H+G+A   + FD+++RL  + 
Sbjct: 16  SRPLRLYDTATGQI---RPTAPGRVAKMYVCGITPYDATHLGHAATYLAFDLVHRL--WL 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V YV+N+TDIDD ++ERA ++      ++   ++  + T  F +D   L  L P 
Sbjct: 71  DAGHEVHYVQNVTDIDDPLLERAERD------SEDWVVLGLRETALFREDMEALRVLPPR 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSI------PNYGSFSRRKI 170
               A   IP+++ +I+ ++  G AY  ++    ++ FD S         NY   + R I
Sbjct: 125 DFVGAVESIPEVVEMIEKLLASGAAYRVDDPEYPDVYFDRSFTGRFGYESNYDDETMRAI 184

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
             ++ G   P++  K++P D +LW+   P EP W+S  GRGRPGWHIECSA++  +LG  
Sbjct: 185 FPERGGD--PDRPGKRDPLDALLWRVERPGEPAWDSSLGRGRPGWHIECSAIALKHLGIG 242

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+ GGG DL+FPHHE   A +         A  ++H G + L+G KMSKS GN + ++ 
Sbjct: 243 FDVQGGGSDLVFPHHEFSAAHAEAMTGEHPFARHYVHAGMIGLDGEKMSKSKGNLVFVSR 302

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSK 344
           L               IRLA+   HYR+  ++T + L +A   L++W      P    ++
Sbjct: 303 LRADDV------DPSAIRLALFAGHYRDDREWTDELLKQANSRLARWREAVSLPSGPDAE 356

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
             +D  +   L +DL+T  A+ A+     E+ ++
Sbjct: 357 ATVD-RLRDHLADDLDTPKALAAVDAWVDEALRH 389


>gi|306836112|ref|ZP_07469098.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567962|gb|EFM43541.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 412

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 196/365 (53%), Gaps = 40/365 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD++YR  ++    K V Y +NITD+DD + ERA ++ 
Sbjct: 41  MYVCGITPYDSTHLGHAATYLTFDLIYR--QFLDAGKKVNYAQNITDVDDPLFERAERDG 98

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 D   + TS+    F  D   L+ + P H   A   + +++ ++Q ++ +G AY 
Sbjct: 99  -----VDWRELGTSQ-IDLFRSDMELLSVIPPQHFIGAMEAVDEIVDMVQKLLDNGAAYV 152

Query: 147 -------------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
                        +A  E  +++    NY     R+   ++ G   P++  KK+P D ++
Sbjct: 153 VDDPEYPDVYASIDATEEFGYES----NYSMEQMREFFAERGGD--PDRPGKKHPMDALI 206

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W+     EP W+SP+G GRPGWHIECSA++++YLG  FDI GGG DL FPHHE   A + 
Sbjct: 207 WRAHREGEPAWKSPFGPGRPGWHIECSAIATNYLGSTFDIQGGGSDLKFPHHEFSAAHAE 266

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A  +++ A  ++H G + L+G KMSKS GN + +++L+E  +          IRL +  
Sbjct: 267 AALGVDRMAQFYVHTGMIGLDGVKMSKSLGNLVFVHKLVEQGE------DPSAIRLGVFS 320

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------VLSALYNDLNTVSAIQA 367
            HYR   D++ + L +A+  L+ W     + G +  A      +  AL +DL+T +A++A
Sbjct: 321 GHYRAERDWSDEVLDQAKARLATWRTALEAPGSLSAAEGAVAGLRQALADDLDTPTALRA 380

Query: 368 LHKLA 372
           +   A
Sbjct: 381 IDDWA 385


>gi|195122364|ref|XP_002005681.1| GI18944 [Drosophila mojavensis]
 gi|193910749|gb|EDW09616.1| GI18944 [Drosophila mojavensis]
          Length = 537

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 122/338 (36%), Positives = 185/338 (54%), Gaps = 22/338 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYN   R        +P  +  Y CGPTVYD  H+G+A   +  D++ R+LR Y+   
Sbjct: 27  INIYNHRVRGKVPLVLRNPHMVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDYFKYN 86

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T + NITD+DDKII R++++  +         +      +F ++  RL    P  +  
Sbjct: 87  LITAM-NITDVDDKIITRSKEQGRNW------QELARTYDAEFKENMLRLNVKPPNMRAH 139

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + +IP +   I+ +I +  AY A ++ + FD S   NYG    + I +++   +  E+ 
Sbjct: 140 VSANIPVIQRFIEQLIENQQAYVAEDKSVYFDVSKCQNYGKL--QNISKEEWALQENEQ- 196

Query: 184 HKKNPADFILWK-RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K++ ADF LWK +    EP W S WG  GRPGWHIECSA++  + G+  D H GGLDL 
Sbjct: 197 GKRSAADFALWKAKKAKYEPSWSSKWGGEGRPGWHIECSAIAGMFFGEELDFHAGGLDLR 256

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQ C   +  +  N W+H G L+L G  +KMSKS GN IT++E+L       
Sbjct: 257 FPHHENEEAQCCAHFKKNQWVNYWLHTGQLHLLGDQQKMSKSLGNTITVDEML------- 309

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           +S+ A   R+A L+++Y   + ++ Q +  A   L K+
Sbjct: 310 KSYTADEFRMACLLSNYNNAMPYSDQLMLTARQTLKKF 347


>gi|311739444|ref|ZP_07713279.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305260|gb|EFQ81328.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 415

 Score =  209 bits (531), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 206/397 (51%), Gaps = 42/397 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y++  + I   + +      MYVCG T YD  H+G+A   + FD++YR   +    
Sbjct: 21  QLRLYDSANQTIAPVE-VAGDTATMYVCGITPYDSTHLGHAATYLTFDLIYRA--FLDAG 77

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YV+NITD+DD + ERA ++       D   + TS+    F  D   L+   P    
Sbjct: 78  KKVHYVQNITDVDDPLFERAERDG-----VDWRELGTSQ-IDLFRSDMELLSVFPPQDYI 131

Query: 124 RATNHIPQMIYLIQNIILHGHAY--------------EANNEIIFDTSSIPNYGSFSRRK 169
            A   + +++ ++Q ++  G AY              EA     +++    NY +   R 
Sbjct: 132 GAMEAVDEVVEMVQKLLDAGAAYVVDDPEHPDIYASIEATERFGYES----NYSAEEMRT 187

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
              ++ G   P++  KKNP D ++W+     EP W+SP+G GRPGWHIECSA++++ LG 
Sbjct: 188 FFAERGGD--PDRPGKKNPLDALIWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGS 245

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI GGG DL FPHHE   A +  A  +E+ A  ++H G + L+G KMSKS GN + ++
Sbjct: 246 TFDIQGGGSDLKFPHHEFSAAHAEAALNVERMAQFYVHTGMIGLDGVKMSKSLGNLVFVH 305

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           +L+      G       IRL +   HYR+  D++ + L  A+  L+ W +     G +  
Sbjct: 306 KLV------GAGEDPSAIRLGVFAGHYRDERDWSDEALDAAKRRLAAWREALAQPGSMAG 359

Query: 350 A------VLSALYNDLNTVSAIQALHKLARESTKNHD 380
           A      + +A+ NDL+T +A+ A+ + A E+ +  D
Sbjct: 360 AEGVVAKLRAAIANDLDTPAALAAVDEWA-EADRGTD 395


>gi|149186074|ref|ZP_01864388.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148830105|gb|EDL48542.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 482

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 148/477 (31%), Positives = 230/477 (48%), Gaps = 48/477 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R++  F  + P   R+Y CGPTVY++ HIGN R  +  DVL R L +   + 
Sbjct: 6   LKLFNSLTREVETFTPVHPGEARVYTCGPTVYNYPHIGNMRAYVFADVLGRTLSWKGYD- 64

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            +T++ NITD+    DD      + E  +     +I  I    T+ +  D   L    P 
Sbjct: 65  -LTHIINITDVGHLTDDADEGEDKMEKMAAEKAQSIWDIAKHYTEAYWADVKALNIRQPA 123

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
               AT++I +MI   + I    H YE  + + FD S+I +YG  +R  + E   G R+ 
Sbjct: 124 KWSVATHYIDEMIEFAKGIA-DKHCYELESGLYFDVSTIEDYGKLAR-AVTEDGEG-RID 180

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K+N ADF +W+++   E     W+SPWG+G PGWH+ECS M    LG  FDIH GG
Sbjct: 181 TVEGKRNAADFAIWRKTPAGETRQMEWDSPWGKGAPGWHLECSVMGGKLLGFPFDIHTGG 240

Query: 238 LDLIFPHHENEIAQS---CCADRIEKTAN----IWIHNGFLNLEGRKMSKSNGNFITINE 290
           +D    HH NEIAQ+   CC + ++   N    IW+HN FL     KMSKS G F+ +  
Sbjct: 241 IDHREIHHPNEIAQNQAHCCTNGLDVAENSGARIWMHNNFLVERSGKMSKSAGEFLRLQL 300

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGII 347
           L++      + +     R+  L  HYR  ++F+ + L  A   L +     +        
Sbjct: 301 LID------KGYHPLAYRMMCLQAHYRSELEFSWEGLQAALTRLKRIVMQVERLEDDLAG 354

Query: 348 DPA----------VLSALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHILGI-- 394
           DP+            +A+ +DLNT  A+ AL + LA +         +      +LG+  
Sbjct: 355 DPSHQKFAPMREKFAAAISDDLNTSVALVALEEALAVKKVDGSVKRAVVEDMDRVLGLNL 414

Query: 395 -EVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ++ +E+L     +A      IE  +  R      K ++++D IR  L +KG  + D
Sbjct: 415 FDLTRENLRIRPKVAKISESEIEAEILRRKEAKVAKDYANSDAIRASLAAKGVEVMD 471


>gi|296117896|ref|ZP_06836479.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969127|gb|EFG82369.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 420

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 212/420 (50%), Gaps = 45/420 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++ + KI   + ++     MYVCG T YD  H+G+A   + FDV+YR+L+   G K
Sbjct: 19  LKLYDSADEKIKPVR-VEGDTATMYVCGITPYDSTHLGHAATYVTFDVIYRMLQDQ-GHK 76

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            V YV+NITD+DD + ERA +        D +    +       F  D  +L    P   
Sbjct: 77  -VHYVQNITDVDDPLFERAER--------DGVDWRELGESQVDLFRSDMEQLGVYPPQDY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE------IIFDTSSIPNYGSFSRRKIDEQKMG 176
             A   I ++I L Q ++ +G AY  ++          D +S   Y S   R+  E+   
Sbjct: 128 IGAIESIDEVIDLTQKLLDNGAAYAVDDAKYPDVYASVDATSQFGYESNYDRETMEKFFA 187

Query: 177 TRV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            R   P++  KK+P D +LW+ +   EP WESP+G GRPGWH+ECSA++++ LG  F I 
Sbjct: 188 ERGGDPDREGKKDPLDALLWRAAREGEPSWESPFGAGRPGWHVECSAIATNRLGSSFLIQ 247

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL +PHHE   A +     +++ A  ++H G + L+G KMSKS GN + +++L+E 
Sbjct: 248 GGGSDLKYPHHEYSAAHAEAGLGVDRMAEFYVHAGMIGLDGTKMSKSLGNLVFVHKLVE- 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------ 348
                +   A  IRL +   HYR   D++ + L+ A   L+ W +T+ ++          
Sbjct: 307 -----QGAEASAIRLGLYAHHYRGDRDWSDEVLSTAVERLNTW-RTAVAETDDADASIDA 360

Query: 349 -----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC 397
                       A+   L NDL+TV A+  + + A++ T       +  A   +LG+ + 
Sbjct: 361 AAAQQAAEETVQALREYLANDLDTVGALNVIDEWAKKPTTAEAAGVVATAVDGLLGVRIS 420


>gi|302344681|ref|YP_003809210.1| cysteine synthase [Desulfarculus baarsii DSM 2075]
 gi|301641294|gb|ADK86616.1| cysteine synthase [Desulfarculus baarsii DSM 2075]
          Length = 775

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 150/480 (31%), Positives = 233/480 (48%), Gaps = 63/480 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K +NTL R+I E + + P  + +Y CGP++     +G  R MI  D+L R L     E 
Sbjct: 309 LKFFNTLTRRIDELRPVRPGRVGIYACGPSLDGPPDLGLCRRMIFADLLRRYLELRGFE- 367

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NI DIDD+ + +   E   +         T++  + F +D   L  L  +  P+
Sbjct: 368 -VKLVVNIADIDDRTVNQCLAEGAEL------KEFTARWEKAFHEDMAALNVLPASDYPK 420

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           A+ HIP+MI   + ++    AYE    + F+ S  PNYG  S   ++  + G  V  + Y
Sbjct: 421 ASEHIPEMIEETRKLLAKDLAYEKLRSVYFNISRYPNYGQLSHVDLNAIQKGKTVDFDYY 480

Query: 184 HKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K+NP+DF L+KR++  E      W +PWG  RPGWH+EC+ MS+ +LG+ FDIH    D
Sbjct: 481 EKENPSDFTLFKRASLQELKAGVYWPTPWGNCRPGWHVECACMSAGHLGQPFDIHLASSD 540

Query: 240 LIFPHHENEIAQSCCADRI--EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LIFPH +NEIA    A+ +  +  AN+W+H+  + ++G+K ++  GN +++ ELLE    
Sbjct: 541 LIFPHGDNEIA---IAESLYGKPLANLWLHSEVVVVDGKKANRVQGNDVSLRELLEQ--- 594

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------- 350
            G S  A  +R  ML  HYR  + F  ++L  AE  + +          + PA       
Sbjct: 595 -GHSPQA--VRYWMLSQHYRRALRFAPEQLDLAERTVRRLNDFVARLRFLTPAPDDAQAE 651

Query: 351 ------------VLSALYNDLNTVSA-------IQALHKLARES----TKNHDLLPIFNA 387
                          A+ NDL    A       I+A+++LA        +   +L     
Sbjct: 652 DVDQLIYETRYRFQEAMDNDLGVAKAQGHIFAFIKAINRLAAGEGLTMAQIQKVLEFMQR 711

Query: 388 SAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +LG+      +N + S    AIE+LVQ+R        F+ AD +R+QL   G  + D
Sbjct: 712 LDSVLGV------MNFDGSSWDPAIEELVQKREQARADGDFALADRLREQLAEMGVQVAD 765


>gi|224531997|ref|ZP_03672629.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511462|gb|EEF81868.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 480

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 157/494 (31%), Positives = 239/494 (48%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    D  ++++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKVYNTRTKDFSELTNFD--DVKLYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F KD  +L
Sbjct: 60  -VNYAMNITDIGHLTGDFDDGEDKVAKTAREKGLTV------YEISEFFTEAFFKDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-IDEQ 173
               P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +    ID+ 
Sbjct: 113 NVTYPDKVLIASKHIPIMIEVVKILEEKKVTYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
              +RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGLGYPSWHLECAAMNLEYFKDK 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFITIN+
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSLGNFITIND 291

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKGI 346
           L E      +++ +   R   L +HYR  + F++  L  ++I    ++++      S   
Sbjct: 292 LEE------QNFSSLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASLNP 345

Query: 347 IDPAVLSA-LYN-------------------DLNTVSAIQALHKLARES----TKNHDLL 382
           +D  +L   L N                   DLN    +  L ++ +           L 
Sbjct: 346 VDLKILDKDLKNLSSNAEKEYYDSFVEKISFDLNVPQGLALLWEIIKSENLGFVSKLKLA 405

Query: 383 PIFNASAHI-LGIEVCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            +F+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR     KG
Sbjct: 406 FVFDEIMSLNLKEEILKSLENHDVVIDDDMKTLIEERRIAKCEKNFKRADEIRDFFAKKG 465

Query: 440 FILEDYKNPDNGQR 453
           F+L D K     +R
Sbjct: 466 FVLVDTKEGTKVKR 479


>gi|145492154|ref|XP_001432075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399184|emb|CAK64678.1| unnamed protein product [Paramecium tetraurelia]
          Length = 672

 Score =  208 bits (530), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 188/345 (54%), Gaps = 33/345 (9%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMI---VF------DVLY 54
           +K+ N+L+  ++  F  I+   +  Y CGPTVY  +H+G+AR      VF      DV+ 
Sbjct: 25  LKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARQCYCNYVFRTYLGIDVIR 84

Query: 55  RLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
           R LR Y+    ++ V NITDIDDKII  A+        N      T    + F      L
Sbjct: 85  RTLRDYFNYDLLS-VMNITDIDDKIINGAK------SANQDFLEFTKVWEKDFFSAMEAL 137

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD--------TSSIPNYGSFS 166
               P    R ++++P+++  I+ II +G+AY++N  + FD          + P     +
Sbjct: 138 NIELPDVITRVSDYVPEIVTFIEKIIANGYAYDSNGSVYFDYFQFQIKLQHTYPKMRPET 197

Query: 167 RRKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
              + ++  G ++  ++  KK+P DF LWK S P EP W SPWG GRPGWHIECS M+S 
Sbjct: 198 NADLLQEGEGESQANKQSEKKSPNDFALWKASKPEEPKWPSPWGEGRPGWHIECSVMASA 257

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            LG   D+H GG+DLIFPHH+N +AQ+      ++  N +IH G LN+  RKMSKS  NF
Sbjct: 258 ILGNPIDLHAGGIDLIFPHHDNSLAQAEACFNCDQWINYFIHLGHLNIADRKMSKSLKNF 317

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +TI+E+L  K++  R      IRL   +  Y   ++++ +++ +A
Sbjct: 318 LTIDEVL--KRYTPRQ-----IRLNFAIHQYDAVMNYSEEQVEQA 355


>gi|216264257|ref|ZP_03436249.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980730|gb|EEC21537.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 480

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/498 (32%), Positives = 243/498 (48%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDA 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  +I++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQR 453
             KGF+L D K     +R
Sbjct: 462 AKKGFVLVDTKEGTKVKR 479


>gi|149920369|ref|ZP_01908839.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149818811|gb|EDM78253.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 537

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/342 (38%), Positives = 175/342 (51%), Gaps = 36/342 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY--YYG 62
           + +YNT  ++   F +  P  +R+Y CG TVY   HIG+AR    +DV  R L Y  Y+ 
Sbjct: 16  LHVYNTRTKRKEAFVSAQPRVVRIYTCGLTVYSDMHIGHARTYCFWDVFRRWLEYRGYH- 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TDIDD+II+ AR++       +    +  +    F +D   L        
Sbjct: 75  ---VISVINYTDIDDRIIKDAREK------GEGTLDLAERVVASFRRDCRALKIKDYAVY 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
            RAT+ + + I  ++ ++  GHAY    E+++D  S   YG  S R ++  + G    T 
Sbjct: 126 TRATDFVEEQIAAVKALVDKGHAYVVEGEVLYDVRSFERYGQLSGRSLEGMQEGASGRTD 185

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGW---ESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
             E   K+  ADF LWK S   EP W   E+ W  GRPGWHIECSAMS+  LGK FD+HG
Sbjct: 186 SAETSRKRFFADFTLWKPSKEGEPCWQTGEAEWPSGRPGWHIECSAMSTTTLGKNFDVHG 245

Query: 236 GGLDLIFPHHENEIAQS--CCADRIEKTANIWIHNG---FLNLEGR--KMSKSNGNFITI 288
           GG+D +FPHHENE+AQS   C        N W+H      LN EG+  KMSKS GN I+I
Sbjct: 246 GGIDNLFPHHENEVAQSEPLCG---HPWVNYWMHPAHLQLLNEEGQPIKMSKSLGNVISI 302

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            +L+         W   V       THYR  + F  Q L EA
Sbjct: 303 GDLVAKHGPDAARWYFGV-------THYRSSLAFNWQLLDEA 337


>gi|68535433|ref|YP_250138.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|260578233|ref|ZP_05846150.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
 gi|311740644|ref|ZP_07714471.1| cysteinyl-tRNA synthetase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|123761918|sp|Q4JXD7|MSHC1_CORJK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 1;
           Short=L-Cys:GlcN-Ins ligase 1; AltName: Full=Mycothiol
           ligase 1; Short=MSH ligase 1
 gi|68263032|emb|CAI36520.1| cysS2 [Corynebacterium jeikeium K411]
 gi|258603633|gb|EEW16893.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
 gi|311304164|gb|EFQ80240.1| cysteinyl-tRNA synthetase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 404

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/387 (33%), Positives = 205/387 (52%), Gaps = 29/387 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+++T ++++ E      +N  + MYVCG T YD  H+G+A   + FD+  R L    G
Sbjct: 19  LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL-LANG 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V Y +NITD+DD + ERA ++       D   + TS+    F  D   L+ + P   
Sbjct: 78  HK-VHYAQNITDVDDPLFERAERDGV-----DWRELGTSQ-INLFRSDMEILSVIPPRDY 130

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRV 179
             A   + ++I ++Q ++  G AYE +   I+   D +    Y S   R   E+    R 
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GGG
Sbjct: 191 GDPDREGKRDPLDALIWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E    
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEAGH- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPA 350
                    IRLA+   HYRE  DF+   L EAE  L++W +        + +  ++D  
Sbjct: 310 -----DPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDK- 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
           + + L +DLNT  A+  L   A +  +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQ 390


>gi|225552408|ref|ZP_03773348.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371406|gb|EEH00836.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 480

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 159/499 (31%), Positives = 244/499 (48%), Gaps = 72/499 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +    + Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLIASKHIPIMIEVVKILEEKKNTYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIA-QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            DIH GG+D I  HH NEIA   C  D+  K  ++++H  FL ++  KMSKS GNFIT+ 
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLDK--KWCDVFVHGEFLIMDYNKMSKSRGNFITVK 290

Query: 290 ELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSK 344
           + LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S 
Sbjct: 291 D-LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYES- 342

Query: 345 GIIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH-- 379
             +DP  L+ L               Y+        DLN    +  L ++ +    +   
Sbjct: 343 --LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVSQGLALLWEIIKSENLSFVS 400

Query: 380 --DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQ 434
              L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR  
Sbjct: 401 KLRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDF 460

Query: 435 LESKGFILEDYKNPDNGQR 453
              KGF+L D K     +R
Sbjct: 461 FAKKGFVLVDTKEGTKVKR 479


>gi|255325703|ref|ZP_05366800.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297313|gb|EET76633.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium tuberculostearicum SK141]
          Length = 415

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 206/397 (51%), Gaps = 42/397 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y++  + I   + +      MYVCG T YD  H+G+A   + FD++YR   +    
Sbjct: 21  QLRLYDSANQTIAPVE-VAGDTATMYVCGITPYDSTHLGHAATYLTFDLIYRA--FLDAG 77

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YV+NITD+DD + ERA ++       D   + TS+    F  D   L+   P    
Sbjct: 78  KKVHYVQNITDVDDPLFERAERDG-----VDWRELGTSQ-IDLFRSDMELLSVFPPQDYI 131

Query: 124 RATNHIPQMIYLIQNIILHGHAY--------------EANNEIIFDTSSIPNYGSFSRRK 169
            A   + +++ ++Q ++  G AY              EA     +++    NY +   R 
Sbjct: 132 GAMEAVDEIVEMVQKLLDAGAAYVVDDPEHPDIYASIEATERFGYES----NYSAEEMRT 187

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
              ++ G   P++  KKNP D ++W+     EP W+SP+G GRPGWHIECSA++++ LG 
Sbjct: 188 FFAERGGD--PDRPGKKNPLDALIWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGS 245

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI GGG DL FPHHE   A +  A  +E+ A  ++H G + L+G KMSKS GN + ++
Sbjct: 246 TFDIQGGGSDLKFPHHEFSAAHAEAALNVERMAQFYVHTGMIGLDGVKMSKSLGNLVFVH 305

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           +L+      G       IRL +   HYR+  D++ + L  A+  L+ W +     G +  
Sbjct: 306 KLV------GAGEDPSAIRLGVFAGHYRDERDWSDEVLDAAKRRLAAWREALAQPGSMAG 359

Query: 350 A------VLSALYNDLNTVSAIQALHKLARESTKNHD 380
           A      + +A+ NDL+T +A+ A+ + A E+ +  D
Sbjct: 360 AEGVVAKLRAAIANDLDTPAALAAVDEWA-EADRGTD 395


>gi|290977210|ref|XP_002671331.1| predicted protein [Naegleria gruberi]
 gi|284084899|gb|EFC38587.1| predicted protein [Naegleria gruberi]
          Length = 416

 Score =  208 bits (529), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/348 (35%), Positives = 176/348 (50%), Gaps = 37/348 (10%)

Query: 5   IKIYNTLERKITEFQAI----DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + +YNTL +     +      D   I  Y CGPTVYD  H+G+AR  +  D++YR+L +Y
Sbjct: 53  VALYNTLSKSKVSLKIAKRLSDVPVINWYSCGPTVYDDTHLGHARNYVCLDIIYRILAHY 112

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    V +V  ITD+DDKI++RA +      +    S I+ K    F++D  +L  + P 
Sbjct: 113 FNYP-VLHVMGITDVDDKILKRAAE------LGKQPSEISRKYEFDFIEDMKKLNVIQPY 165

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN----YGSFSRRKIDEQKM 175
              R T HI ++   ++ +  +G  Y  AN  + FD+         YG  S     E   
Sbjct: 166 VYTRVTEHIEEIKQFVEEMEKNGFTYTTANGGVYFDSKKFEQNDHYYGKLSPNNAQESIQ 225

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKV 230
              +  +  KK+P DF LWK ++    GWES WG GRPGWHIECSAM  H          
Sbjct: 226 QEHIEHREEKKDPRDFALWKFTSRDYLGWESKWGYGRPGWHIECSAMIDHIFNNKSGAAT 285

Query: 231 FDIHGGGLDLIFPHHENEIAQS--------CCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
            DIH GG+DL FPHH NEIAQS        CC+ R     N +IH G L+++G KMSKS 
Sbjct: 286 IDIHSGGIDLAFPHHNNEIAQSEAKNHAHFCCS-RETNWCNYFIHVGHLHIKGLKMSKSL 344

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            NFITI + L       + +     R+  L+  Y + +D+    + EA
Sbjct: 345 KNFITIKDFL-------KRYSPDQFRIFCLLHQYNQTLDYNEDAIGEA 385


>gi|227503624|ref|ZP_03933673.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075660|gb|EEI13623.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 412

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/365 (33%), Positives = 196/365 (53%), Gaps = 40/365 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD++YR  ++    K V Y +NITD+DD + ERA ++ 
Sbjct: 41  MYVCGITPYDSTHLGHAATYLTFDLIYR--QFLDAGKKVNYAQNITDVDDPLFERAERDG 98

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 D   + TS+    F  D   L+ + P H   A   + +++ ++Q ++ +G AY 
Sbjct: 99  V-----DWRELGTSQ-IDLFRSDMELLSVIPPQHFIGAMEAVDEIVDMVQKLLDNGAAYV 152

Query: 147 -------------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
                        +A  E  +++    NY     R+   ++ G   P++  KK+P D ++
Sbjct: 153 VDDPEYPDVYASIDATEEFGYES----NYSMEQMREFFAERGGD--PDRPGKKHPMDALI 206

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W+     EP W+SP+G GRPGWHIECSA++++YLG  FDI GGG DL FPHHE   A + 
Sbjct: 207 WRAHREGEPAWKSPFGSGRPGWHIECSAIATNYLGSTFDIQGGGSDLKFPHHEFSAAHAE 266

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A  +++ A  +++ G + L+G KMSKS GN + +++L+E  +          IRL +  
Sbjct: 267 AALGVDRMAQFYVYTGMIGLDGVKMSKSLGNLVFVHKLVEQGE------DPSAIRLGVFS 320

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------VLSALYNDLNTVSAIQA 367
            HYR   D++ + L +A+  L+ W     + G +  A      +  AL +DL+T +A++A
Sbjct: 321 GHYRAERDWSDEVLDQAKARLATWRTALEAPGALSAAEDAVAGLRQALADDLDTPAALRA 380

Query: 368 LHKLA 372
           +   A
Sbjct: 381 IDNWA 385


>gi|312149265|gb|ADQ29336.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 480

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 160/498 (32%), Positives = 242/498 (48%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS    YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKGYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDA 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  +I++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQR 453
             KGF+L D K     +R
Sbjct: 462 AKKGFVLVDTKEGTKVKR 479


>gi|226320825|ref|ZP_03796378.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233767|gb|EEH32495.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 480

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 244/498 (48%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +    + Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKNTYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDA 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQR 453
             KGF+L D K     +R
Sbjct: 462 AKKGFVLVDTKEGTKVKR 479


>gi|308271740|emb|CBX28348.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 761

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 150/480 (31%), Positives = 241/480 (50%), Gaps = 53/480 (11%)

Query: 1   MKKKIKI--YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           +K+KI +  +NT+ R    F+ I P    +Y CGPTV+D  H G  R  +  D+L R L 
Sbjct: 300 VKEKINLMLFNTITRSKEPFEPIHPGKASVYSCGPTVHDRMHPGECRRFVFSDLLCRYLE 359

Query: 59  YYYGEKCVTYVRNITDIDDKII---ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +      V ++ NITD+DDK I   E+A  E         +S  T K    F +D   L 
Sbjct: 360 FR--GYSVKHIMNITDLDDKTINGSEKAGLE---------LSEFTEKYINLFKEDLNLLG 408

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
                + P+A+ HI  M+ L + ++  G+AYE    + FD S   +YG  S   I++ ++
Sbjct: 409 IKPAENYPKASEHIEDMVLLAEKLVKKGYAYEKLRSLYFDISRFSDYGKLSGIDINKIRI 468

Query: 176 GTRVP-EKYHKKNPADFILWKRS--TPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKV 230
           G  V  ++Y K NP DF L KR+  + +  G    + WG  RP WHI+C+AM+  YLG+ 
Sbjct: 469 GATVDLDEYEKDNPRDFTLMKRAKLSELRRGIYTATDWGNVRPSWHIQCAAMAMKYLGES 528

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIH    +LIFPHHENEIA S  A   +  A  W+H   + ++G+K+ +  G  + +++
Sbjct: 529 FDIHTSSRELIFPHHENEIAIS-KALTGKALAKFWMHCDRVLVDGKKLDEIKGR-LCVSD 586

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------- 336
           L+    + GR      IR  ++ THYR+PI F+ +RL +A   L +              
Sbjct: 587 LINM-GYSGRE-----IRYWLISTHYRKPIVFSNKRLEDARKSLKRLDTCVHALLDIKAG 640

Query: 337 --WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE---STKNHDLLP-----IFN 386
             +P+       I    + A+ +DLN  +A+ ++ ++ R+    +++  + P     I +
Sbjct: 641 EPYPEIDQLLYDIKNGFIGAMDDDLNISAALSSIFRIVRKINVLSRDKKIDPAGAKKILD 700

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I  +    +  N      +++L++ER      K + +AD IRK+LES G  + D K
Sbjct: 701 AFKDIDSVLNVFDFGNCYFDPEVKRLLEERDRARTEKNWGAADDIRKKLESMGVAIRDRK 760


>gi|300121951|emb|CBK22525.2| Cysteinyl-tRNA synthetase [Blastocystis hominis]
          Length = 593

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 170/310 (54%), Gaps = 26/310 (8%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y CGPTVYD +H+G+AR  +  D+L R+L   +G   +     IT+IDDKII ++RQ   
Sbjct: 43  YSCGPTVYDSSHVGHARTYVQIDLLQRILSRRFGMN-IHSAMGITNIDDKIINKSRQ--T 99

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
            IP  +    I S+  ++F+ D  RL    P    R ++ IP+++  I+ +   G AY+ 
Sbjct: 100 MIPWQE----IASRYEEEFINDMQRLNVKMPMSVVRVSDMIPEIVDYIRVLEDKGIAYKT 155

Query: 149 NNEIIFDT-SSIPNYGSF--SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           ++ I FDT SS+  Y     S   ++ Q    + PEK H   P DF LWKR+  ++  W+
Sbjct: 156 SSGIYFDTQSSLYKYEKLVPSISDVESQSRLAQDPEKRH---PRDFALWKRADDIDYSWD 212

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWGRGRPGWHIECS       G   D+H GG+DL FPHH NEIAQ  C          W
Sbjct: 213 SPWGRGRPGWHIECSVNCHSLFGDHLDVHAGGIDLRFPHHCNEIAQ--CEAYSGGGGGAW 270

Query: 266 ----IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
               +H G + +EGRKMSKS  NFITI++LL+T       + A   R+  ++ HY   I 
Sbjct: 271 CDMMLHIGHIFIEGRKMSKSLKNFITIDQLLQT-------YSANDFRMFCMLNHYSARIQ 323

Query: 322 FTVQRLTEAE 331
                L EA+
Sbjct: 324 LDDNGLVEAQ 333


>gi|291242855|ref|XP_002741321.1| PREDICTED: cysteinyl-tRNA synthetase 2, mitochondrial-like, partial
           [Saccoglossus kowalevskii]
          Length = 424

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/337 (37%), Positives = 176/337 (52%), Gaps = 24/337 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R          +  + Y+CGPTVYD AHIG+A   + FDVL R+L  ++   
Sbjct: 75  VDVYNSLTRTKVPLILQKDNIAKWYMCGPTVYDSAHIGHASCYVRFDVLRRILTEFFDID 134

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V  +T+IDDKII RAR++   +       I  +    +F  D   L  L  T   R
Sbjct: 135 -VVMVMGVTNIDDKIINRAREK--DVDFKQLARIYEN----EFASDMQALKVLPATVYTR 187

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSS--IPNYGSFSRRKIDEQKMGTRVPE 181
            T++IPQ++  +QNII  G AY   +  + FD  +  I  Y         +       PE
Sbjct: 188 VTDYIPQILVFVQNIIDTGCAYSTPSGSVYFDVEAFGIERYAKLMPHVRHDHGRHIVEPE 247

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWG--RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           K H +   DF LWK + P EP W SPWG  +GRPGWHIECS MSS   G   DIH GG+D
Sbjct: 248 KRHLR---DFALWKAAKPGEPWWSSPWGQGKGRPGWHIECSTMSSAIFGNALDIHTGGID 304

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHH+NEIAQ     +  +  N ++H+G L+L  +  KMSKS GN IT+ + L+    
Sbjct: 305 LAFPHHDNEIAQCEACHQTHQWTNYFLHSGILHLKDDAEKMSKSIGNTITVQDYLQKHT- 363

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
                 A   R+  L+T Y   I++    + +A  +L
Sbjct: 364 ------ANQFRMICLLTKYSHNIEYCEDIVMQASSIL 394


>gi|226360027|ref|YP_002777805.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|310947211|sp|C1ASS8|MSHC_RHOOB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|226238512|dbj|BAH48860.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Rhodococcus opacus B4]
          Length = 415

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/390 (31%), Positives = 203/390 (52%), Gaps = 35/390 (8%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++++T +R++   + + P     MYVCG T YD  H+G+A   + FD++ R+ R     
Sbjct: 19  LRLFDTADRQV---RPVTPGRTATMYVCGITPYDATHLGHAATYLTFDLVNRIWRD--AG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P    
Sbjct: 74  HDVHYVQNVTDVDDPLFERANRD------GEDWVVLGMRETALFREDMEALRVLPPRDYI 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG---SFSRRKID---EQ 173
            A   I ++I +++  +  G AY  ++    ++ F   +   +G    + R  +D    +
Sbjct: 128 GAVESIGEVIEMVEKFVASGAAYVVDDPEFPDVYFRADATEQFGYESGYDRATMDTFFAE 187

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G   P++  K+NP D ++W+ + P EP W SP+G GRPGWHIECSA++ + +G  FD+
Sbjct: 188 RGGD--PDRPGKQNPLDALVWRAARPGEPSWPSPFGPGRPGWHIECSAIALNRIGSGFDV 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L  
Sbjct: 246 QGGGSDLIFPHHEYSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR- 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIID-- 348
                G       IRL +L  HYR+   +T Q L +A   L  W   +   +++   D  
Sbjct: 305 -----GEGVDPAAIRLGLLSGHYRQDRPWTEQVLADAHTRLQLWKDAAALESAQSATDTI 359

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN 378
             +   L +DL+T  A+ AL   AR +  N
Sbjct: 360 ARLRQHLADDLDTPKALDALDGWARRALDN 389


>gi|313665040|ref|YP_004046911.1| cysteine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949642|gb|ADR24238.1| cysteine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 441

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 144/441 (32%), Positives = 214/441 (48%), Gaps = 43/441 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y CGPTVY++ HIGNARP+I+ DVL R L+       + Y++NITDIDDKII +A  
Sbjct: 19  INLYCCGPTVYNYIHIGNARPVILVDVLIRYLK--SRNIKINYLQNITDIDDKIILKALD 76

Query: 86  EHPSIPINDAISI-ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
                  N+   + I+ K T+ ++ D   L    P      +  + +MI  I++++    
Sbjct: 77  -------NNLTELEISQKYTKAYLNDLESLNINQPDKIILISEKMNEMIKFIKDLVDIKA 129

Query: 145 AYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           AYE   ++ F+     N Y   S  K+DE   G R+     K    DF LWK+ T +   
Sbjct: 130 AYELEGDVYFNIKKYQNEYCKLSGYKLDELISGKRIEIDSKKDYSLDFSLWKK-TEIGIK 188

Query: 204 WESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           W+S +G GRPGWH EC  +   Y   +  DIH GG+DL FPHHENE  Q    +  E  A
Sbjct: 189 WDSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKFPHHENERIQFIAKNNKE-LA 247

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           NIW+HNG L +   KMSKS GN I + + +       + +    +R   L T+Y +P++ 
Sbjct: 248 NIWLHNGHLQINNEKMSKSLGNVILVKDFI-------KKYNKNTLRWIFLTTNYTQPLNI 300

Query: 323 TVQRLTEAEILLSKWPQTS--TSKGIIDPAVLSALYN--------------DLNTVSAIQ 366
           +   + +A     K    S  T + II   +   L N              DLNT   + 
Sbjct: 301 SDDLIYQANKFFEKLTNLSKKTIQFIIKNDLEIELINQSEYIDQFNSYMDDDLNTSLVLS 360

Query: 367 ALHKLARESTKN------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
            +  L ++  KN       +   + ++ ++IL +   K   N N     +KL  +   L+
Sbjct: 361 LIDSLIKQINKNILDNKFENFNLLISSLSYILDVLGFKNVFNYNFKKETKKLFLKWQQLV 420

Query: 421 KMKKFSSADYIRKQLESKGFI 441
           K K+F  AD IRK L  +G +
Sbjct: 421 KNKEFDKADLIRKDLIEQGIL 441


>gi|221218126|ref|ZP_03589592.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192074|gb|EEE18295.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 480

 Score =  207 bits (527), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 243/498 (48%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+  G K
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDA 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQR 453
             KGF+L D K     +R
Sbjct: 462 AKKGFVLVDTKEGTKVKR 479


>gi|86741333|ref|YP_481733.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
 gi|123723762|sp|Q2J9N8|MSHC_FRASC RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|86568195|gb|ABD12004.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 464

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 127/380 (33%), Positives = 198/380 (52%), Gaps = 35/380 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K ++I++T    + E         R+YVCG T YD  H+G+A   + +D+  R+LR    
Sbjct: 41  KPLRIFDTATSSVRELAPA--VTARLYVCGITPYDATHLGHAFTYLTYDLAQRVLRD--A 96

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS--IITSKNTQQFVKDTTRLACLAPT 120
              V YV+N+TD+DD ++ERA +        D +    +  +    F +D T L  LAP 
Sbjct: 97  GHHVHYVQNVTDVDDPLLERATR--------DGLDWRALADREIDLFREDMTALRMLAPD 148

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK------IDEQK 174
                   IP ++ ++  ++  G AY+ ++++ F  ++ P +G  S         I  ++
Sbjct: 149 AYVGVVEAIPMIVDMVVELVDRGAAYQVDDDLYFSIATAPAFGEISHLSRAEMLAICAER 208

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G   P +  KK+P D +LW+   P EP W SP+G GRPGWHIECSA++ HYLG V DI 
Sbjct: 209 GGD--PRRTGKKDPLDPLLWRAHRPGEPSWPSPFGPGRPGWHIECSAIARHYLGGVIDIQ 266

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   A +  A  I   A  ++H   ++L+G KMSKS GN   ++ L   
Sbjct: 267 GGGTDLSFPHHECSAAHAEVAAGIRPFARSYVHTAMVSLDGHKMSKSRGNLEFVSRL--- 323

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
           ++ G    PA  +RLA+L   + E  ++T   L +A   +++W      P    + G++ 
Sbjct: 324 RRAGVD--PA-ALRLALLDHRHTEDWEWTPGLLDDAVDRMNRWRAAVALPTGPDAMGLL- 379

Query: 349 PAVLSALYNDLNTVSAIQAL 368
            AV   L +DL+   A+ A+
Sbjct: 380 AAVRERLADDLDAPGAVAAV 399


>gi|239940119|ref|ZP_04692056.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239986608|ref|ZP_04707272.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291443551|ref|ZP_06582941.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346498|gb|EFE73402.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 409

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 206/385 (53%), Gaps = 36/385 (9%)

Query: 3   KKIKIYNTLER-KITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + ++I++T    +IT    +DP  + R+YVCG T YD  H+G+A     FD++ R+  + 
Sbjct: 17  RDLRIHDTATGGRIT----LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WL 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  L P 
Sbjct: 71  DTKRQVHYVQNVTDVDDPLLERAVRD------GQDWTELAERETALFREDMTALRMLPPR 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQK 174
           H   A   IP ++ L++ +   G AY+   ++ F   + P++G  S       R +  ++
Sbjct: 125 HYIGAVEAIPGIVPLVERLRDAGAAYDLEGDVYFSVDADPHFGEVSGLDAAAMRLLSAER 184

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G   PE+  KKNP D +LW  + P EP W+ +  G GRPGWHIEC A++  +LG  FDI
Sbjct: 185 GGD--PERPGKKNPLDPMLWMAARPGEPSWDGASLGDGRPGWHIECVAIALDHLGMGFDI 242

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 243 QGGGSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSALRR 302

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGII 347
                    PA  IRLA+L  HYR   ++T Q L +A   L++W      P   ++  ++
Sbjct: 303 DGVD-----PA-AIRLALLSRHYRSDWEWTDQVLADAVERLARWRAAVSRPDGPSADALV 356

Query: 348 DPAVLSALYNDLNTVSAIQALHKLA 372
           +  V  AL +DL++ +A+ A+ + A
Sbjct: 357 E-QVREALADDLDSPAALAAVDRWA 380


>gi|110004174|emb|CAK98512.1| probable cysteinyl-trna synthetase protein [Spiroplasma citri]
          Length = 445

 Score =  207 bits (526), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/336 (35%), Positives = 176/336 (52%), Gaps = 30/336 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R  T++      NI  Y CGPTVY++ HIGNAR +I  D+L   L++   E 
Sbjct: 1   MKLYNTLTRNFTDYSQTKKINI--YGCGPTVYNYIHIGNARAIITVDLLVSFLQFQQIE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII +A  EH +         I     + F +D   L    PT   R
Sbjct: 58  -VNYIQNYTDIDDKIIAKAAAEHKT------EQEIAEFYIKAFEEDVFNLNVRTPTKWVR 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
            T+H+  ++  IQ ++    AYE N  + FD +     YG  + +KI E +   R+    
Sbjct: 111 VTDHVKDIVTFIQKLVKINAAYEVNGSVYFDIAKYQTQYGQLANKKISELEANARIEHDA 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPW-------GRGRPGWHIECSAMSSHYLGK-VFDIHG 235
           +K +  DF LWK++T    G   P+        +GRPGWH EC+ +   +  K   DIH 
Sbjct: 171 NKHSQYDFALWKQTT---EGISFPFYDQKGKLYQGRPGWHTECAVLIDKFFHKETIDIHA 227

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL+FPHHENE  Q    +  E  A IW+HNG LN+  +KMSKS  N I + + +   
Sbjct: 228 GGIDLVFPHHENERIQFFAKNNKE-IAKIWMHNGHLNVADKKMSKSLNNTILVRDFI--- 283

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
               + + A  +R  +  T+Y +P++ T   +  A+
Sbjct: 284 ----KLYGANTLRYLLYATNYTQPLNVTETLIISAQ 315


>gi|195941732|ref|ZP_03087114.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi 80a]
          Length = 480

 Score =  207 bits (526), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 243/498 (48%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+  G K
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQR 453
             KGF+L D K     +R
Sbjct: 462 AKKGFVLVDTKEGTKVKR 479


>gi|218249402|ref|YP_002375106.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223888983|ref|ZP_03623574.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224533521|ref|ZP_03674110.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226321905|ref|ZP_03797431.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226735049|sp|B7J2G1|SYC_BORBZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218164590|gb|ACK74651.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885799|gb|EEF56898.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224513194|gb|EEF83556.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226233094|gb|EEH31847.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|312148140|gb|ADQ30799.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 480

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 159/499 (31%), Positives = 242/499 (48%), Gaps = 72/499 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+  G K
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDT 232

Query: 231 FDIHGGGLDLIFPHHENEIA-QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            DIH GG+D I  HH NEIA   C  D   K  ++++H  FL ++  KMSKS GNFIT+ 
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLDN--KWCDVFVHGEFLIMDYNKMSKSRGNFITVK 290

Query: 290 ELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSK 344
           + LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S 
Sbjct: 291 D-LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYES- 342

Query: 345 GIIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH-- 379
             +DP  L+ L               Y+        DLN    +  L ++ +    +   
Sbjct: 343 --LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVS 400

Query: 380 --DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQ 434
              L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR  
Sbjct: 401 KLRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDF 460

Query: 435 LESKGFILEDYKNPDNGQR 453
              KGF+L D K     +R
Sbjct: 461 FAKKGFVLVDTKEGTKVKR 479


>gi|225549500|ref|ZP_03770466.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369777|gb|EEG99224.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 480

 Score =  206 bits (525), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 243/498 (48%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+  G K
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDA 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNIAQGLALLWEIIKSENLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQR 453
             KGF+L D K     +R
Sbjct: 462 AKKGFVLVDTKEGTKVKR 479


>gi|118617863|ref|YP_906195.1| cysteinyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|310947204|sp|A0PQV5|MSHC_MYCUA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|118569973|gb|ABL04724.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium ulcerans Agy99]
          Length = 411

 Score =  206 bits (525), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/415 (32%), Positives = 215/415 (51%), Gaps = 39/415 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + ++++Y+T +R++   + + P N   MYVCG T YD  H+G+A   + FD+++RL    
Sbjct: 16  EPELRLYDTADRQV---RPVAPGNTATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDL 72

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V YV+N+TD+DD + ERA ++   +   D    + ++    F +D   L  L+P 
Sbjct: 73  GHE--VRYVQNVTDVDDPLFERADRD--GVDWRD----LAAQEVALFREDMAALRVLSPH 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRKID------ 171
               AT  + ++I L++ ++  G AY  + E   + + + +   +G  S    D      
Sbjct: 125 DYVGATEAVAEIIELVEKLLASGAAYVLDGEHPDVYYRSDATLQFGYESGYDRDTMLGLF 184

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           EQ+ G   P +  K +  D +LW+ + P EP W SP+G GRPGWHIEC+A++   +G   
Sbjct: 185 EQRGGD--PGRPGKNDALDALLWRAARPGEPSWPSPFGPGRPGWHIECAAIALSRVGSGL 242

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+ GGG DLIFPHHE   A + C    ++ A  ++H G +  +G KMSKS GN + ++ L
Sbjct: 243 DVQGGGSDLIFPHHEFTAAHAECVTGEQRFARHYVHAGMIGWDGHKMSKSRGNLVLVSGL 302

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                      PA  +RL +L  HYR    ++ Q L EA   L +W   +T     D A 
Sbjct: 303 RAEGVN-----PA-AVRLGLLAGHYRADRFWSQQVLDEAVGRLQRWRAATTLPAGPDAAA 356

Query: 352 LSA-----LYNDLNTVSAIQALHKLARESTK--NHD-LLPIFNASA--HILGIEV 396
           + A     L +DLNT  AI AL   A ++     HD + P   AS    +LG+++
Sbjct: 357 VVARVRQYLADDLNTPKAIAALDGWATDALDYGGHDEVAPRLVASTIDALLGVDL 411


>gi|119953383|ref|YP_945592.1| cysteinyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254765179|sp|A1R030|SYC_BORT9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119862154|gb|AAX17922.1| cysteinyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 481

 Score =  206 bits (525), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 162/508 (31%), Positives = 246/508 (48%), Gaps = 86/508 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL---YRLLRYYY 61
           +++YNT  + ++E +  + S+I++Y CGPTVY++AHIGN R  I  D+L    RLL+Y  
Sbjct: 3   LRLYNTKTKSLSEVK--NFSDIKVYACGPTVYNYAHIGNFRTYIFEDLLIKSLRLLKY-- 58

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
               V Y  NITDI          +DK+++ AR+   ++        I+   T+ F  D 
Sbjct: 59  ---NVNYAMNITDIGHLTGEFDEGEDKVVKAARERGLTVYE------ISRFFTEAFFCDC 109

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
            +L  + P     A+ +I  MI +I+ +  +G  Y  N  + FDTS   +YG  +   ++
Sbjct: 110 EKLNIVRPDKVLIASEYIASMIEVIKVLEQNGFTYFVNGNVYFDTSLFKSYGQMAGINLN 169

Query: 172 EQKMGT--RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHY 226
           + +  +  RV     KKN +DF+LW  ++     E  W+SPWG G P WH+EC+AM+   
Sbjct: 170 DFEFSSVSRVEVDPSKKNKSDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLDC 229

Query: 227 LGKVFDIHGGGLDLIFPHHENEIA-QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
                DIH GG+D I  HH NEIA   C  +R+    +I++H  FL +E  KMSKSN NF
Sbjct: 230 FRSTLDIHLGGVDHIGVHHINEIAIAECYLNRM--WCDIFVHGEFLIMEDEKMSKSNNNF 287

Query: 286 ITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQT 340
           ITI + LET  F      +P+  R   L  HYR  + FT   L   ++    +L+K    
Sbjct: 288 ITIQD-LETNGF------SPLDFRYFCLTAHYRTQLKFTFNNLRACKVARKNMLNKLTAV 340

Query: 341 STSKGIIDPAVLSALYNDLNTV--------------------------------SAIQAL 368
            +S    D  +LS  Y ++ +V                                  + AL
Sbjct: 341 FSSLNQFDLLLLSKNYENIESVLEKRYYDSFLEKIAFDLSIPQALALLWDIIKDDNLSAL 400

Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
            KL R + K  ++L +         IE  K+ +  NI  A+  L++ER +    K F  A
Sbjct: 401 SKL-RLTFKFDEVLSLGLKEGVFREIE--KDRI--NIDDAMNSLLEERRLAKIRKDFKRA 455

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTR 456
           D IR+   SKGF+L D    + G ++ R
Sbjct: 456 DEIREYFYSKGFVLID---TEEGTKVKR 480


>gi|256376329|ref|YP_003099989.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Actinosynnema mirum DSM 43827]
 gi|310947170|sp|C6WIA0|MSHC_ACTMD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|255920632|gb|ACU36143.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Actinosynnema mirum DSM 43827]
          Length = 412

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 127/388 (32%), Positives = 201/388 (51%), Gaps = 33/388 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++++T   ++      D    R+YVCG T YD  H+G+A   + FD++ R+  +   
Sbjct: 17  RPLRLHDTATGEVRPTAPGD--TARLYVCGITPYDATHLGHAATYLAFDLVQRV--WLDN 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD ++ERA ++       D   ++  + T  F +D   L  LAP   
Sbjct: 73  GHDVHYVQNVTDVDDPLLERAARD------QDDWVVLAMRETALFREDMEALRVLAPREY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYG---SFSRR---KIDE 172
             A   IP ++ +I+ ++  G AY  +++    + F   + PN+G   ++ R    ++  
Sbjct: 127 VGAVESIPGIVDMIEKLLASGAAYRLDDDEYPDVYFPHDATPNFGYESNYDRETMLRLFA 186

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K++P D +LW+ + P EP WE+  G GRPGWHIECS ++   L   FD
Sbjct: 187 ERGGD--PDRPGKRDPLDALLWRMARPGEPSWETSIGTGRPGWHIECSHIALANLDTPFD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL+FPHHE   A +         A  + H G + L+G KMSKS GN + +++L 
Sbjct: 245 LQGGGSDLVFPHHEYSAAHAEALTGQHPFARHYAHAGMIGLDGEKMSKSRGNLVFVSKLR 304

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPA 350
            T    G      VIRLA+   HYRE   +T +   EA   L+ W   +   S   +D  
Sbjct: 305 STGVDPG------VIRLALFAGHYREDRPWTDELFAEAGTRLALWRSAADLESGPSVDDV 358

Query: 351 VLSA---LYNDLNTVSAIQALHKLARES 375
           V      L NDL+T  A+ AL   ARE+
Sbjct: 359 VARVREHLGNDLDTPKALAALDAWAREA 386


>gi|325185588|emb|CCA20071.1| cysteinyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 656

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 154/459 (33%), Positives = 221/459 (48%), Gaps = 93/459 (20%)

Query: 22  DPSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--VRNITDIDDK 78
           D S IR  Y CGPTVYD AH+G+AR  +  D++ R++   +G   +++  V  +TDIDDK
Sbjct: 53  DTSCIRKWYACGPTVYDRAHLGHARAYVSQDIIRRIIERQFG---ISFFLVMGVTDIDDK 109

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
           II+RA++          + +  ++ +Q F  D  RL    P    R + H+ ++I  I+ 
Sbjct: 110 IIQRAKERQIHY-----LELARAEESQ-FFYDLDRLGVRRPHAVTRVSEHVEEIIRFIER 163

Query: 139 IILHGHAYEANN--EIIFDTSSI-PNYGSFSRRKID-EQKMGTRVPEKYH------KKNP 188
           I+L+G AY A++   + FDT  +   YG     K+D  Q       E  +      KKNP
Sbjct: 164 IVLNGFAYIASDVSGVYFDTEQLGTEYG-----KLDPSQGSSVEAVELMYESKDSIKKNP 218

Query: 189 ADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
            DF+LWK  +    EP WESPWG GRPGWHIECSAM  + LG   D+H GG+DL FPHH 
Sbjct: 219 KDFVLWKTVKEPQNEPCWESPWGLGRPGWHIECSAMIHYVLGDKIDLHTGGIDLRFPHHN 278

Query: 247 NEIAQS----------CCADRIEKTANIW----IHNGFLNLEGRKMSKSNGNFITINELL 292
           NEIAQS          CC+  + +    W    +H G L ++G+KMSKS  NF TI   L
Sbjct: 279 NEIAQSEAHNYPQNKTCCS--VHQINEPWCRHFLHFGHLYIQGQKMSKSLKNFTTIEAFL 336

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------- 337
           E          A   R+  L   YR  I ++ +R+ +A   + K                
Sbjct: 337 EKH-------TADQFRVFCLQYKYRSNIHYSSERMRDAAAFIDKLCNFFRNVEAYSSHES 389

Query: 338 PQTSTSKGIIDPAVLSALY-----------NDLNTVSAIQALHKLARESTKNHDLLPIFN 386
            + S     +D  +L AL+           +D +T SA+Q + K+   S  N  LL    
Sbjct: 390 SEASKKCTDLDLEILKALFHAKERVSICLADDFDTPSALQHISKMV--SRANEYLL---- 443

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKF 425
                      +EH    I +AI + V + L L  M++ 
Sbjct: 444 ---------TRQEHNPIEIRMAIAQYVLDVLELFGMRQL 473


>gi|300786807|ref|YP_003767098.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796321|gb|ADJ46696.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 412

 Score =  206 bits (524), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 208/393 (52%), Gaps = 36/393 (9%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           +  RMYVCG T YD  H+G+A   + FD++ R+ R    +  V YV+N+TDID+ ++ERA
Sbjct: 36  ATARMYVCGITPYDATHLGHAATYLAFDLVNRIWRDNGHD--VHYVQNVTDIDEPLLERA 93

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
            ++       D + ++  + T  F +D T L  + P     A   IP+++ +I  ++ +G
Sbjct: 94  ARDQ-----GDWV-VLGMRETALFREDMTALRVIPPRQFVGAVESIPEIVEVIAKLLANG 147

Query: 144 HAYEANN----EIIFDTSSI------PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            AY A +    +I FD ++        NY + +  K   ++ G   P +  K++P D +L
Sbjct: 148 SAYRAGDPEFPDIYFDHTATGRFGYESNYDAETMAKFFAERGGD--PGRAGKRHPLDALL 205

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W+ +   EP WES  G GRPGWHIECSA++ + LG  FD+ GGG DLIFPHHE   A + 
Sbjct: 206 WRVAREGEPSWESELGPGRPGWHIECSAIAVNRLGLGFDLQGGGSDLIFPHHEYSAAHAE 265

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
              +  + A  ++H G + L+G KMSKS GN + ++ L   +   G       IRLA+  
Sbjct: 266 AVAKDGRFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRADQVDPG------AIRLALFA 319

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPA--VLSALYNDLNTVSAIQAL 368
            HYR+   +T + LT+AE  L++W +    +T     D    +   L ++L+T  A+ A+
Sbjct: 320 GHYRDDRPWTDRLLTDAETRLARWREAVALATGPAAEDTVTRLRDHLSDNLDTPKALAAI 379

Query: 369 HKLARESTKNHDLLP-----IFNASAHILGIEV 396
              A E+ +     P     I +A   +LGI +
Sbjct: 380 DAWANEALRRDGTDPTAPGLIRDAVDALLGIAL 412


>gi|15594944|ref|NP_212733.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|224532694|ref|ZP_03673311.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|6831681|sp|O51545|SYC_BORBU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2688519|gb|AAC66952.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi B31]
 gi|224512312|gb|EEF82696.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 480

 Score =  206 bits (524), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 158/498 (31%), Positives = 243/498 (48%), Gaps = 70/498 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+  G K
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFL-GYK 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+ + AR++  ++        I+   T+ F  D  +L
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------YEISEFFTEAFFNDCRKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
             + P     A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + ++ 
Sbjct: 113 NIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKD 172

Query: 175 MGT-RVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           M   RV     K+N  DF+LW  ++     E  W+SPWG G P WH+EC+AM+  Y    
Sbjct: 173 MTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDA 232

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +
Sbjct: 233 LDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKD 291

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSKG 345
            LE + F      +P+  R   L +HYR  + F++  L  ++I    L++K      S  
Sbjct: 292 -LEDQNF------SPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYES-- 342

Query: 346 IIDPAVLSAL---------------YN--------DLNTVSAIQALHKLARESTKNH--- 379
            +DP  L+ L               Y+        DLN    +  L ++ +    +    
Sbjct: 343 -LDPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSK 401

Query: 380 -DLLPIFNASAHI-LGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQL 435
             L  IF+    + L  E+ K   N ++ I   ++ L++ER I    K F  AD IR   
Sbjct: 402 LRLAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFF 461

Query: 436 ESKGFILEDYKNPDNGQR 453
             KGF+L D K     +R
Sbjct: 462 AKKGFVLVDTKEGTKVKR 479


>gi|195057996|ref|XP_001995365.1| GH23122 [Drosophila grimshawi]
 gi|193899571|gb|EDV98437.1| GH23122 [Drosophila grimshawi]
          Length = 533

 Score =  206 bits (523), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/397 (33%), Positives = 197/397 (49%), Gaps = 52/397 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYN   R        +P  +  Y CGPTVYD  H+G+A   +  D++ R+LR Y+   
Sbjct: 26  IQIYNHTVRGKVPLVLRNPHVVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDYFKYN 85

Query: 65  CVTYVRNITDIDDKIIERARQEHPS-IPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            VT + NITD+DDKII+R+R+   + + +  A +        +F  D  RL    P  + 
Sbjct: 86  LVTAM-NITDVDDKIIKRSRETGRNWLELAQAFAA-------EFKLDMHRLNVKPPNLRA 137

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
             + +I  +   I+ ++    AY   +N + FD +S  +YG   +      ++    P+ 
Sbjct: 138 HVSANIATIQLFIEQLLATQQAYVSQDNSVYFDVASCASYGKLEKLL----QLQESNPQS 193

Query: 183 YHKKNPADFILWKR------STPMEPGWESPWGR-GRPGWHIECSAMSSHYLGKVFDIHG 235
             K+  ADF LWK       +   EP WE+ WG  GRPGWHIECSA++  + G+  DIH 
Sbjct: 194 SGKRTAADFALWKAKKEGEAAQQDEPSWEASWGGVGRPGWHIECSAIAGKFFGRQLDIHA 253

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLE 293
           GGLDL FPHHENE AQ C     ++  N W+H G L+L G   KMSKS GN I++ E+L 
Sbjct: 254 GGLDLRFPHHENEEAQCCAHYETDQWVNYWLHTGQLHLVGDEHKMSKSRGNTISVEEML- 312

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTS 343
           TK      + A   R+A L+++YR  + +          T+++       LS + Q    
Sbjct: 313 TK------YTADEFRMACLLSNYRNAMPYGDSLMITARQTLRKFKNFHADLSAYMQFQKP 366

Query: 344 KGIIDPAVLSA------------LYNDLNTVSAIQAL 368
             ++D   L A            L +D +T  A+  L
Sbjct: 367 LKLLDEGALQAQLKHTMLEFDNSLRDDFDTARALAVL 403


>gi|183983109|ref|YP_001851400.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium marinum M]
 gi|310947198|sp|B2HFY1|MSHC_MYCMM RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|183176435|gb|ACC41545.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium marinum M]
          Length = 411

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/413 (32%), Positives = 213/413 (51%), Gaps = 39/413 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++Y+T +R++   + + P N   MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 18  ELRLYDTADRQV---RPVAPGNTATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGH 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV+N+TD+DD + ERA ++   +   D    + ++    F +D   L  L+P   
Sbjct: 75  E--VRYVQNVTDVDDPLFERADRD--GVDWRD----LAAQEVALFREDMAALRVLSPHDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRKID------EQ 173
             AT  + ++I L++ ++  G AY  + E   + + + +   +G  S    D      EQ
Sbjct: 127 VGATEAVAEIIELVEKLLASGAAYVLDGEHPDVYYRSDATLQFGYESGYDRDTMLGLFEQ 186

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G   P +  K +  D +LW+ + P EP W SP+G GRPGWHIEC+A++   +G   D+
Sbjct: 187 RGGD--PGRPGKNDALDALLWRAARPGEPSWPSPFGPGRPGWHIECAAIALSRVGSGLDV 244

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ L  
Sbjct: 245 QGGGSDLIFPHHEFTAAHAECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSGLRA 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                    PA  +RL +L  HYR    ++ Q L EA   L +W   +T     D A + 
Sbjct: 305 EGVN-----PA-AVRLGLLAGHYRADRFWSQQVLDEAVGRLQRWRAATTLPAGPDAAAVV 358

Query: 354 A-----LYNDLNTVSAIQALHKLARESTK--NHD-LLPIFNASA--HILGIEV 396
           A     L +DLNT  AI AL   A ++     HD + P   AS    +LG+++
Sbjct: 359 ARVRQYLADDLNTPKAIAALDGWATDALDYGGHDEVAPRLVASTIDALLGVDL 411


>gi|229494883|ref|ZP_04388636.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rhodococcus erythropolis SK121]
 gi|229318241|gb|EEN84109.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rhodococcus erythropolis SK121]
          Length = 413

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 199/388 (51%), Gaps = 31/388 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y+T +R++   + + P     MYVCG T YD  H+G+A   + FD++ R+ R     
Sbjct: 19  LRLYDTADRQV---RPVTPGEKATMYVCGITPYDATHLGHAATYLTFDLVNRIWRD--AG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD + ERA ++       D I ++  + T  F +D   L  L P    
Sbjct: 74  HDVHYVQNVTDVDDPLFERANRDG-----EDWI-VLGMRETALFREDMEALRVLPPKDYI 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG--SFSRRKIDEQKMGT 177
            A   + +++ L++  +  G AY  ++    ++ F   +   +G  S   R   E+    
Sbjct: 128 GAVESVNEVVELVEKFVASGAAYIVDDAEFPDVYFRADATEQFGYESGYDRATMEKFFAE 187

Query: 178 RV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           R   P++  K+NP D ++W+   P EP W SP+G GRPGWHIEC+A++ + +G  FD+ G
Sbjct: 188 RGGDPDRVGKRNPLDALVWRAERPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDVQG 247

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L    
Sbjct: 248 GGSDLIFPHHEFSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR--- 304

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA- 354
              G       IRL +L  HYR+   +T Q L +A+  L  W + +            A 
Sbjct: 305 ---GEGVDPAAIRLGLLSGHYRQDRAWTDQVLADAQSRLKVWREAAALGSAPSATDTVAR 361

Query: 355 ----LYNDLNTVSAIQALHKLARESTKN 378
               L +DL+T  A+ AL   AR + + 
Sbjct: 362 LRQHLADDLDTPKALDALDGWARRAIEG 389


>gi|153827601|ref|ZP_01980268.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149737926|gb|EDM52831.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 222

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 103/229 (44%), Positives = 144/229 (62%), Gaps = 9/229 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+N +++F+ S    YG  S++ +++ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLEQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FD
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFD 222


>gi|325066743|ref|ZP_08125416.1| cysteinyl-tRNA synthetase [Actinomyces oris K20]
          Length = 229

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 105/238 (44%), Positives = 149/238 (62%), Gaps = 24/238 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIFDTSSIPNY 162
           ++F      L   APT++PRAT HIP+MI L+Q ++  GHAY  E+ N + +D  S+P Y
Sbjct: 3   REFDAAYRALGVDAPTYEPRATGHIPEMIDLVQRLLDAGHAYVGESGN-VYYDVRSLPGY 61

Query: 163 GSFSRRKI-------DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGR 212
           GS + +++       DE ++   V  +  K++P DF LWK + P EP    W++PWGRGR
Sbjct: 62  GSLTNQRLEDLATTEDESQLDDDV--EADKRDPRDFALWKAAKPTEPADAAWDAPWGRGR 119

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWH+ECS MS  YLG+ FDIHGGG+DL FPHHENE AQS  A      A  W+HN ++ 
Sbjct: 120 PGWHLECSTMSRRYLGETFDIHGGGIDLRFPHHENEQAQSHGAGW--GFARHWVHNAWVT 177

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ++G KMSKS GN + + ELL       + + A V+RLA+   H+R  ++F+ + L +A
Sbjct: 178 IKGEKMSKSLGNSLVVAELL-------KRYDAAVLRLALGTVHHRSTVEFSEETLADA 228


>gi|21220159|ref|NP_625938.1| cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256788729|ref|ZP_05527160.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289772623|ref|ZP_06532001.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces lividans TK24]
 gi|61216726|sp|Q9ADA4|MSHC_STRCO RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|13620189|emb|CAC36366.1| putative cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702822|gb|EFD70251.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces lividans TK24]
          Length = 409

 Score =  205 bits (522), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/368 (33%), Positives = 195/368 (52%), Gaps = 35/368 (9%)

Query: 21  IDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +DP  + R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TD+DD +
Sbjct: 32  LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDDPL 89

Query: 80  IERARQEHPSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           +ERA        + D +  + +  + T  F +D T L  L P H   A   IP ++ L++
Sbjct: 90  LERA--------VRDGVDWTALAEQETALFREDMTALRMLPPQHYIGAVEAIPGIVPLVE 141

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADF 191
            +   G AYE   ++ F   + P++G  S       R +  ++ G   P++  KKNP D 
Sbjct: 142 RLRDAGAAYELEGDVYFSVEADPHFGGVSHLDAATMRLLSAERGGD--PDRPGKKNPLDP 199

Query: 192 ILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG DL FPHHE   +
Sbjct: 200 MLWMAAREGEPSWDGGTLGRGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGAS 259

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +         A  ++H G + L+G KMSKS GN + +++L           PA  IRL 
Sbjct: 260 HAQALTGEFPMAKAYVHAGMVGLDGEKMSKSKGNLVFVSQLRREGVD-----PA-AIRLT 313

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSA 364
           +L  HYR   ++T Q L +A   L +W      P    ++ +++  +  AL NDL++ +A
Sbjct: 314 LLAHHYRSDWEWTDQVLQDALARLDRWRAAVSRPDGPPAEALVE-EIREALANDLDSPAA 372

Query: 365 IQALHKLA 372
           + A+ + A
Sbjct: 373 LAAVDRWA 380


>gi|83319731|ref|YP_424102.1| cysteinyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|109894910|sp|Q2ST11|SYC_MYCCT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83283617|gb|ABC01549.1| cysteinyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 441

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 142/441 (32%), Positives = 219/441 (49%), Gaps = 43/441 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y CGPTVY++ HIGNARP+I+ DVL R L+    +  + Y++NITDIDDKII +A  
Sbjct: 19  INLYCCGPTVYNYIHIGNARPVILVDVLTRYLKSRNIK--INYLQNITDIDDKIILKALD 76

Query: 86  EHPSIPINDAISI-ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
                  N+   + I+ K T+ +++D   L    P      +  + +M+  I++++    
Sbjct: 77  -------NNLTELEISQKYTKAYLEDLESLNINQPDKIILISEKMNEMVKFIKDLVDIKA 129

Query: 145 AYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           AYE + ++ FD     N Y   S  K+DE   G R+     KK   DF LWK+ T +   
Sbjct: 130 AYELDGDVYFDIKKYQNEYCKLSGYKLDELISGKRIEIDSKKKYSLDFSLWKK-TQIGIK 188

Query: 204 WESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           W+S +G GRPGWH EC  +   Y   +  DIH GG+DL FPHHENE  Q    +  E  A
Sbjct: 189 WDSFFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKFPHHENERIQFIAKNNKE-LA 247

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +IW+HNG L +   KMSKS GN I + + +       +      +R   L T+Y +P++ 
Sbjct: 248 DIWLHNGHLQINDEKMSKSLGNVILVKDFI-------KKHNKNTLRWIFLTTNYTQPLNI 300

Query: 323 TVQRLTEAEILLSKWPQTS--TSKGIIDPAVLSALY--------------NDLNTVSAIQ 366
           +   + +A     K    S  T + II   +  +L               +DLNT   + 
Sbjct: 301 SDDLIYQANKFFEKLTNLSKKTIQFIIKNDLKISLIKQSKYIDQFNNYMDDDLNTSLVLS 360

Query: 367 ALHKLARESTKN------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
            +  L ++  KN       +   + ++ ++IL +   K+  N      I++L  +   L+
Sbjct: 361 LIDSLIKQINKNILDNISDNFNLLISSLSYILDVLGFKDVFNYKFKKEIKELFLKWQQLV 420

Query: 421 KMKKFSSADYIRKQLESKGFI 441
           K K+F  AD IRK L  +G +
Sbjct: 421 KDKEFDKADLIRKDLIEQGIL 441


>gi|323455151|gb|EGB11020.1| hypothetical protein AURANDRAFT_12123 [Aureococcus anophagefferens]
          Length = 271

 Score =  205 bits (521), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 152/284 (53%), Gaps = 30/284 (10%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           ++ Y CGPTVYD  H+G+AR  +  D++ R    Y G + V +   +TD+DDKII RAR 
Sbjct: 1   LKWYACGPTVYDATHLGHARTYVTLDLVRRAATAYGGSR-VDFAMGVTDVDDKIINRAR- 58

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E    P+      +  +    F +D  RL CL P    R + H+  ++  + +I+  G  
Sbjct: 59  ELGLEPLE-----LARREEANFFEDLDRLGCLRPDRVLRVSEHVDDIVAYVGDIVDRGFG 113

Query: 146 YEA-NNEIIFDTSSIPN-YGSFSRRK-------------IDEQKMGTRVPEKYHKKNPAD 190
           Y     ++ FD   + + YG+F+  +              D+  + T+      K++  D
Sbjct: 114 YATEGGDVWFDVGKLGDAYGAFAEGRGTSKAAAQAALEAEDKASISTK------KRDGRD 167

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   E  W+SPWG GRPGWHIECSAM+    G   D+H GG+DL FPHHENEIA
Sbjct: 168 FALWKGAKAGEISWDSPWGAGRPGWHIECSAMTRATFGDALDLHAGGVDLAFPHHENEIA 227

Query: 251 Q--SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           Q      D        W+H G L++EGRKMSKS  NF+T+ ELL
Sbjct: 228 QWRGASGDLEGVWCPCWLHTGHLHIEGRKMSKSLKNFVTVRELL 271


>gi|271967212|ref|YP_003341408.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|310947222|sp|D2AU10|MSHC_STRRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|270510387|gb|ACZ88665.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 407

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/337 (34%), Positives = 176/337 (52%), Gaps = 21/337 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T   ++   Q       R+YVCG T YD  H+G+A   + FD++ RL R    E 
Sbjct: 19  LRLFDTAAGEVGPTQP--GPTARLYVCGITPYDATHLGHANTYLAFDLVNRLWRDAGHE- 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TD+DD ++ERA Q             +  +  + F  D   L  L P     
Sbjct: 76  -VHFTQNATDVDDPLLERAEQ------TGQDWRELAEREIELFRTDMEALRILPPREYVG 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS----RRKIDEQKMGTRVP 180
            T  I Q+  LI+ +   G  Y+ + ++ FD ++ P +G+ S     R +D        P
Sbjct: 129 VTEVIDQVAELIELLRDKGATYDLDGDLYFDVAAAPKFGAVSGYSEERMLDLFGQRGGDP 188

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           ++  KK+P D++LW+   P EP W SP+G+GRPGWHIEC+A++   LG  FD+ GGG DL
Sbjct: 189 DRAGKKHPLDWLLWRAERPGEPSWPSPFGQGRPGWHIECTAIALANLGSGFDVAGGGSDL 248

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE    +   A      A  ++H G + L+G KMSKS GN + ++ L +       
Sbjct: 249 IFPHHECGAHEGHVACGEWPFAKAYVHAGMVALDGEKMSKSKGNLVFVSRLRKEAD---- 304

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
                 IRLA+L  HYR   ++T  +L  AE+ L++W
Sbjct: 305 ---PMAIRLALLAHHYRSDWEWTADQLASAEVRLARW 338


>gi|333028184|ref|ZP_08456248.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332748036|gb|EGJ78477.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 409

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 193/359 (53%), Gaps = 30/359 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +    + V YV+N+TD+DD ++ERA ++
Sbjct: 39  RIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDSGRQVHYVQNVTDVDDPLLERAVRD 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +  + +  + T  F +D T L  L P H   A   IP ++ L++ +   G AY
Sbjct: 97  ------GEDWTGLAERETALFREDMTALRMLPPRHYIGAVEAIPGIVPLVERLCAMGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E   +I F  +S  ++G  S       R +  ++ G   PE+  KKNP D +LW  +   
Sbjct: 151 ELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERGGD--PERPGKKNPLDPMLWMAAREG 208

Query: 201 EPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG DL FPHHE   + +       
Sbjct: 209 EPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHAQVLTGEH 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L+G KMSKS GN + ++ L   +K G    PA  IRLA+L  HYR  
Sbjct: 269 PFARSYVHAGMVGLDGEKMSKSKGNLVFVSRL---RKDGVD--PA-AIRLALLAHHYRAD 322

Query: 320 IDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            ++T + L EA   L++W      P   +++ +++  V  AL +DL++  A+ A  + A
Sbjct: 323 WEWTAEGLQEAVDRLARWRAAVSRPDGPSAEALVE-EVRDALADDLDSPRALLAFDRWA 380


>gi|302518136|ref|ZP_07270478.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB78]
 gi|318059123|ref|ZP_07977846.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318078551|ref|ZP_07985883.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|302427031|gb|EFK98846.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB78]
          Length = 409

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 126/359 (35%), Positives = 193/359 (53%), Gaps = 30/359 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +    + V YV+N+TD+DD ++ERA ++
Sbjct: 39  RIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDSGRQVHYVQNVTDVDDPLLERAVRD 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +  + +  + T  F +D T L  L P H   A   IP ++ L++ +   G AY
Sbjct: 97  ------GEDWTGLAERETALFREDMTALRMLPPRHYIGAVEAIPGIVPLVERLCAMGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E   +I F  +S  ++G  S       R +  ++ G   PE+  KKNP D +LW  +   
Sbjct: 151 ELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERGGD--PERPGKKNPLDPMLWMAAREG 208

Query: 201 EPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG DL FPHHE   + +       
Sbjct: 209 EPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHAQVLTGEH 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L+G KMSKS GN + ++ L   +K G    PA  IRLA+L  HYR  
Sbjct: 269 PFARSYVHAGMVGLDGEKMSKSKGNLVFVSRL---RKDGVD--PA-AIRLALLAHHYRAD 322

Query: 320 IDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            ++T + L EA   L++W      P   +++ +++  V  AL +DL++  A+ A  + A
Sbjct: 323 WEWTAEGLQEAVDRLARWRAAVSRPDGPSAEALVE-EVRDALADDLDSPRALLAFDRWA 380


>gi|254823397|ref|ZP_05228398.1| cysteinyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 400

 Score =  204 bits (520), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/399 (32%), Positives = 199/399 (49%), Gaps = 46/399 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+T +R++    +   S   MYVCG T YD  H+G+A   + FD++YR  ++    
Sbjct: 7   ELRLYDTSDRQVRPVAS--GSTATMYVCGITPYDATHLGHAATYLAFDLIYR--QWLDLG 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD ++ERA  E   I   +    +  +    F +D T L  LAP    
Sbjct: 63  HDVHYVQNVTDVDDPLLERA--ERDGIDWRE----LAQREVSLFREDMTALRMLAPREYV 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGS------------FSRR 168
            AT  I +++ L++ ++  G AY    E   I +   + P +G             FS R
Sbjct: 117 GATEAIAEVVELVEKMLASGAAYVVEGEYPDIYYRADATPQFGYESGYDRETMLRLFSER 176

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
             D Q+ G        K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G
Sbjct: 177 GGDPQRPG--------KTDQLDALLWRAARPGEPSWPSPFGDGRPGWHVECAAIALSRIG 228

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
              DI GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +
Sbjct: 229 SGLDIQGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLV 288

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + L        +   A  IRL +L  HYR    ++ Q L EA   L +W   +      D
Sbjct: 289 STLR------AQGVEAAAIRLGLLAGHYRGDRYWSQQVLDEAVARLQRWRTATALPTGPD 342

Query: 349 PAVLSA-----LYNDLNTVSAIQALHKLARESTK--NHD 380
            A + A     L +DL+T  A+ AL   + ++ +   HD
Sbjct: 343 AADVIARVRQYLADDLDTPKALAALDGWSTDALEYGGHD 381


>gi|226306683|ref|YP_002766643.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Rhodococcus erythropolis PR4]
 gi|310947210|sp|C0ZZW9|MSHC_RHOE4 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|226185800|dbj|BAH33904.1| probable cysteine--1D-myo-inosityl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC
           [Rhodococcus erythropolis PR4]
          Length = 413

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 199/388 (51%), Gaps = 31/388 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y+T +R++   + + P     MYVCG T YD  H+G+A   + FD++ R+ R     
Sbjct: 19  LRLYDTADRQV---RPVTPGKKATMYVCGITPYDATHLGHAATYLTFDLVNRIWRD--AG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD + ERA ++       D I ++  + T  F +D   L  L P    
Sbjct: 74  HDVHYVQNVTDVDDPLFERANRDG-----EDWI-VLGIRETALFREDMEALRVLPPKDYI 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG--SFSRRKIDEQKMGT 177
            A   + +++ L++  +  G AY  ++    ++ F   +   +G  S   R   E+    
Sbjct: 128 GAVESVNEVVELVEKFVASGAAYIVDDAEFPDVYFRADATEQFGYESGYDRATMEKFFAE 187

Query: 178 RV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           R   P++  K+NP D ++W+   P EP W SP+G GRPGWHIEC+A++ + +G  FD+ G
Sbjct: 188 RGGDPDRVGKRNPLDALVWRAERPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDVQG 247

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L    
Sbjct: 248 GGSDLIFPHHEFSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR--- 304

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA- 354
              G       IRL +L  HYR+   +T Q L +A+  L  W + +            A 
Sbjct: 305 ---GEGVDPAAIRLGLLSGHYRQDRAWTDQVLEDAQSRLKVWREAAALDSAPSATDTVAR 361

Query: 355 ----LYNDLNTVSAIQALHKLARESTKN 378
               L +DL+T  A+ AL   AR + + 
Sbjct: 362 LRQHLADDLDTPKALDALDGWARRAIEG 389


>gi|297560505|ref|YP_003679479.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|310947207|sp|D7B412|MSHC_NOCDD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296844953|gb|ADH66973.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 407

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/345 (37%), Positives = 180/345 (52%), Gaps = 28/345 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MY CG T YD AH+G+A   + FD++ R+ R    +  V YV+N TDIDD ++ERA  E 
Sbjct: 40  MYACGITPYDAAHLGHAFTYLTFDLVNRVWRDAGHD--VNYVQNTTDIDDPLLERA--EA 95

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   D    +  +    F +D   L  + PT        +  +  L   I   G AYE
Sbjct: 96  TGVDWRD----LAHREIDVFREDMAALRIIPPTSYVGVVESVDLISDLAARIRDTGAAYE 151

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRV--PEKYHKKNPADFILWKRSTPME 201
            + ++ F  +  P +G  S   +D  +M    G R   P++  KK+P D++LW+   P E
Sbjct: 152 LDGDLYFSVAEAPEFGEIS--NLDRGQMLELFGERGGDPQRTGKKDPLDWLLWRAERPGE 209

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           P W+SP GRGRPGWHIECSA++   LG  FD++GGG DLIFPHHE   A++ CA      
Sbjct: 210 PAWDSPLGRGRPGWHIECSAIALDRLGPAFDLNGGGSDLIFPHHEMGAAETRCATGGPNA 269

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N  +H G + L+G KMSKS GN + +++L +         PA VIRLAML  HYR P +
Sbjct: 270 HNH-LHVGMVGLDGEKMSKSLGNLVFVSKLRQQGVD-----PA-VIRLAMLAHHYRAPWE 322

Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNT 361
           +T   L  A     +W          D      AV +AL  DL++
Sbjct: 323 WTDAELPAATARAERWRSALALGAAPDAAPVLAAVRAALSEDLDS 367


>gi|328881306|emb|CCA54545.1| L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Streptomyces venezuelae ATCC 10712]
          Length = 409

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/361 (34%), Positives = 194/361 (53%), Gaps = 34/361 (9%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TD+DD ++ERA   
Sbjct: 39  RIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDDPLLERA--- 93

Query: 87  HPSIPINDAISII--TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
                I D +  +    + T  F +D T L  L P H   A   IP ++ L++ +   G 
Sbjct: 94  -----IRDGVDWVGLAERETALFREDMTALRMLPPQHYIGAVEAIPGIVPLVERLRDSGA 148

Query: 145 AYEANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           AYE + +I F   + P++G  S       R +  ++ G   PE+  KKNP D +LW  + 
Sbjct: 149 AYELDGDIYFSVDADPHFGEVSHYSTELMRHLSAERGGD--PERPGKKNPLDPMLWMAAR 206

Query: 199 PMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W+ +  G GRPGWHIEC A++  +LG  FD+ GGG DLIFPHHE   + +     
Sbjct: 207 EGEPSWDGASLGAGRPGWHIECVAIALDHLGMGFDVQGGGSDLIFPHHEMGASHAQALTG 266

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A  ++H G + L+G KMSKS GN + +++L           PA  IRLA+L   YR
Sbjct: 267 EFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSKLRRDGVD-----PA-AIRLALLSHRYR 320

Query: 318 EPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           +  ++T Q L +A+  L +W      P   ++  +++  +  AL +DL+T +A+ A+ + 
Sbjct: 321 DDWEWTDQVLRDAQERLGRWRAAVSRPDGPSADALVE-ELREALSDDLDTPTALVAVDRW 379

Query: 372 A 372
           A
Sbjct: 380 A 380


>gi|187918460|ref|YP_001884023.1| cysteinyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|229558618|sp|B2S0U7|SYC_BORHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119861308|gb|AAX17103.1| cysteinyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 481

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 159/505 (31%), Positives = 243/505 (48%), Gaps = 80/505 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL---YRLLRYYY 61
           +K+YNT  + +++ +    S+ ++Y CGPTVY++AHIGN R  I  D+L    RLL+Y  
Sbjct: 3   LKLYNTKTKSLSDIKNF--SDTKVYACGPTVYNYAHIGNLRTYIFEDLLIKSLRLLKY-- 58

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
               V Y  NITDI          +DK+++ AR+   ++        I+   T+ F  D 
Sbjct: 59  ---NVNYAMNITDIGHLTGDFDEGEDKVVKAARERGLTVYE------ISRFFTEAFFDDC 109

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
            +L  + P     A+ +I  MI +++ +  +G  Y  N  + FDTS    YG  +   I+
Sbjct: 110 AKLNIVYPDKVLVASEYIASMIEVVKVLEQNGFTYFVNGNVYFDTSRFNGYGQMA--GIN 167

Query: 172 EQKMG----TRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSS 224
               G    +RV     KKN +DF+LW  ++     E  W+SPWG G P WH+EC+AM+ 
Sbjct: 168 LNNFGRSSVSRVEIDLSKKNKSDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNL 227

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNG 283
            Y     DIH GG+D +  HH NEIA + C   + K   ++++H  FL +E  KMSKSN 
Sbjct: 228 DYFKSTLDIHLGGVDHVGVHHINEIAIAECY--LNKMWCDMFVHGEFLIMEDEKMSKSNN 285

Query: 284 NFITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWP 338
           NFITI + LE+  F      +P+  R   L  HYR  + FT   L   +I    +L+K  
Sbjct: 286 NFITIKD-LESDGF------SPLDFRYFCLTAHYRTQLKFTFSNLRACKIARENMLNKLT 338

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQA----LHKLAREST------------KNHDLL 382
              +S    D A+L+    ++ +VS  +     L K+A + +            K+ DL 
Sbjct: 339 FFYSSLSQFDMALLNKNCENIESVSENKYYNNFLEKIAFDLSIPQALALLWDIVKDDDLS 398

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEK-----------LVQERLILLKMKKFSSADYI 431
            +          EV    L + +   IE+           L++ER +    K F  AD I
Sbjct: 399 ALLKLLLAFKFDEVLSLGLKEGVLREIERDRVNIDDTMHSLIEERRLAKLRKDFKRADEI 458

Query: 432 RKQLESKGFILEDYKNPDNGQRMTR 456
           R+   SKGF+L D    + G ++ R
Sbjct: 459 REYFRSKGFVLID---TEEGTKVKR 480


>gi|115903770|ref|XP_796899.2| PREDICTED: similar to MGC88928 protein [Strongylocentrotus
           purpuratus]
 gi|115973007|ref|XP_001191711.1| PREDICTED: similar to MGC88928 protein [Strongylocentrotus
           purpuratus]
          Length = 523

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 193/377 (51%), Gaps = 40/377 (10%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           + CGPTVYD AHIG+A   + FD++ R+L  ++ +  V  V  ITDIDDKII R+ +++ 
Sbjct: 48  FACGPTVYDSAHIGHASSYVRFDIIRRILAEFF-QTSVVMVMGITDIDDKIIRRSHEQN- 105

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
              + D    +     ++F +D   L  L  T   R ++HIP+++  I +II +G+ Y  
Sbjct: 106 ---LKD-FRELAGFYEREFYQDMQHLKVLPATVYTRVSDHIPEILTFIDSIIKNGYGYST 161

Query: 149 NNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           ++  ++   D  ++  Y   + + +D Q    +      K++P DF LWK   P EP W+
Sbjct: 162 SSGSVYFNVDAFTLERYDKLASQDLDVQHDEGKEFIDPEKRHPRDFALWKGVKPGEPWWD 221

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           +PWG+GRPGWHIECSAMS    G+  DIH GG DL FPHH NEIAQ        + AN +
Sbjct: 222 APWGKGRPGWHIECSAMSKAIFGERLDIHTGGRDLAFPHHNNEIAQCEACFNSNQWANYF 281

Query: 266 IHNGFL--NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +H+G L    +  KMSKS  N ++I + L+T       +     R   LM+ Y   +++ 
Sbjct: 282 LHSGHLYRKYDADKMSKSLQNVVSIQDFLKT-------YTPNQFRFLCLMSKYDHDLEYG 334

Query: 324 VQRLTEAEIL---LSKWPQTSTS--KGII-----------------DPAVLSALYNDLNT 361
              + +A +L   +S +   + +  KG I                    V+ AL +D +T
Sbjct: 335 PDTMQQAVVLHRQMSAFLNDADAYVKGQICCKPFNEAELMQRLETTREEVIEALADDFDT 394

Query: 362 VSAIQALHKLARESTKN 378
             A+  + KLA     N
Sbjct: 395 KRALDCIMKLAHTCNSN 411


>gi|13508095|ref|NP_110044.1| cysteinyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500964|sp|P75423|SYC_MYCPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1674171|gb|AAB96128.1| cysteinyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 437

 Score =  204 bits (519), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/448 (32%), Positives = 213/448 (47%), Gaps = 56/448 (12%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            ++   I +Y+CGPTVY+  H+GN RP+IVFDVL R+L+    +  V +V+NITDIDDKI
Sbjct: 20  VLEQKQINIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQA--AQYKVQFVQNITDIDDKI 77

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           I+ A+Q+  S            K      K   +   + P    + T+ I +M   I  +
Sbjct: 78  IKIAQQQEIS-------EAQLCKQQITAYKSLLKKLNILPIKHLQVTDKIDKMPGYIARL 130

Query: 140 ILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           +  G AY +      F  S +P YG  + R ++     T   E   K+N  DF+LWK++T
Sbjct: 131 VKKGFAYVSPLGNTYFSVSQLPQYGILANRVVE-----TIEDEATDKRNKLDFVLWKQTT 185

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                W SPWG GRPGWH+EC+ +  +       IHGGG+DL FPHHENE A        
Sbjct: 186 A-GVKWNSPWGWGRPGWHVECAFLIDYSFKDQLTIHGGGVDLKFPHHENENAMHMALYDK 244

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
             T + W+H G L  E +KMSKS  NF+   + L    F        ++R      HY  
Sbjct: 245 PLTQH-WMHIGHLMFENQKMSKSLQNFLLAVDFLTIHDF-------RILRWLFYQKHYYH 296

Query: 319 PIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPA----VLSALYNDLNTVSA 364
           P+D +          ++R+ +A  +   W   S    I  P     V  AL N+LN  +A
Sbjct: 297 PLDLSQSLIEQACSDIKRIQKAVNVCRTWFVYSEQSAIPAPKQFEPVFKALLNNLNFANA 356

Query: 365 IQALHKLARESTKNHDL-----------LPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           I  + KL ++   NHD+           L     + +ILGI     H   N+     +L+
Sbjct: 357 ITHIWKLVKQI--NHDVSKQNLSGLKEHLSHLEWALNILGIGFKSIHTKLNV-----QLI 409

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFI 441
           ++   L K  +   AD +R++L  KG +
Sbjct: 410 KKWASLRKNGQLDKADEVRQKLIKKGLL 437


>gi|301633284|gb|ADK86838.1| cysteine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 437

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 145/448 (32%), Positives = 213/448 (47%), Gaps = 56/448 (12%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            ++   I +Y+CGPTVY+  H+GN RP+IVFDVL R+L+    +  V +V+NITDIDDKI
Sbjct: 20  VLEQKQINIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQA--AQYKVQFVQNITDIDDKI 77

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           I+ A+Q+  S            K      K   +   + P    + T+ I +M   I  +
Sbjct: 78  IKIAQQQEIS-------EAQLCKQQITAYKSLLKKLNILPIKHLQVTDKIDKMPGYIARL 130

Query: 140 ILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           +  G AY +      F  S +P YG  + R ++     T   E   K+N  DF+LWK++T
Sbjct: 131 VQMGFAYVSPLGNTYFSVSQLPQYGILANRVVE-----TIEDEATDKRNKLDFVLWKQTT 185

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                W SPWG GRPGWH+EC+ +  +       IHGGG+DL FPHHENE A        
Sbjct: 186 A-GVKWNSPWGWGRPGWHVECAFLIDYSFKDQLTIHGGGVDLKFPHHENENAMHMALYDK 244

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
             T + W+H G L  E +KMSKS  NF+   + L    F        ++R      HY  
Sbjct: 245 PLTQH-WMHIGHLMFENQKMSKSLQNFLLAVDFLTIHDF-------RILRWLFYQKHYYH 296

Query: 319 PIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPA----VLSALYNDLNTVSA 364
           P+D +          ++R+ +A  +   W   S    I  P     V  AL N+LN  +A
Sbjct: 297 PLDLSQSLIEQACSDIKRIQKAVNVCRTWFVYSEQSAIPAPKQFEPVFKALLNNLNFANA 356

Query: 365 IQALHKLARESTKNHDL-----------LPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           I  + KL ++   NHD+           L     + +ILGI     H   N+     +L+
Sbjct: 357 ITHIWKLVKQI--NHDVSKQNLSGLKEHLSHLEWALNILGIGFKSIHTKLNV-----QLI 409

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFI 441
           ++   L K  +   AD +R++L  KG +
Sbjct: 410 KKWASLRKNGQLDKADEVRQKLIKKGLL 437


>gi|289641824|ref|ZP_06473981.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia symbiont of Datisca glomerata]
 gi|289508349|gb|EFD29291.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia symbiont of Datisca glomerata]
          Length = 413

 Score =  204 bits (518), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/379 (33%), Positives = 189/379 (49%), Gaps = 29/379 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +T  R +    A     +RMYVCG T YD  H+G+A   + +D+ YR+L       
Sbjct: 19  LRVSDTATRAVRPLAA--GQTVRMYVCGITPYDATHLGHAFTYLTYDLAYRVL--LDAGH 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TD+DD + ERAR++  S+   +    I    T+ F  D T L  L P     
Sbjct: 75  DVVYVQNVTDVDDPLFERARRD--SLDWRE----IARSQTELFRADMTALRILPPAVYAG 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----- 179
           A   IP +I LI+ +   G AY    +I F   + P +G  S   +   +M TR      
Sbjct: 129 AVESIPLVIELIEQLRDRGAAYPVEQDIYFPIGAAPRFGEVS--HLSHAEMVTRAAGNGG 186

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P +  K +P D +LW+     EP W SP+G GRPGWHIEC+A++  +LG   DI GGG 
Sbjct: 187 DPRRAGKDDPLDPLLWRAERAGEPSWPSPFGPGRPGWHIECAAIALAHLGDSIDIQGGGT 246

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHE  +A +  A  +   A  ++H   ++L G KMSKS GN   ++ LL      
Sbjct: 247 DLVFPHHECGVAHAEVASGVWPFARTYVHTAMVSLGGHKMSKSRGNLEFVSRLLR----- 301

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----S 353
           G   PA  IRLA+L   +    ++T   +  A   L++W   +      D   L      
Sbjct: 302 GGVQPA-AIRLALLDHRHTVGWEWTPGAIDTARDRLARWQAATAGASAPDARPLLDDVRR 360

Query: 354 ALYNDLNTVSAIQALHKLA 372
            L +DL+   A+ A+ + A
Sbjct: 361 HLADDLDAPGALAAVDRWA 379


>gi|111017896|ref|YP_700868.1| cysteinyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|122956108|sp|Q0SIC6|MSHC_RHOSR RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|110817426|gb|ABG92710.1| cysteine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 415

 Score =  203 bits (517), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/387 (31%), Positives = 200/387 (51%), Gaps = 35/387 (9%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++++T +R++   + + P     MYVCG T YD  H+G+A   + FD++ R+ R     
Sbjct: 19  LRLFDTADRQV---RPVTPGRTATMYVCGITPYDATHLGHAATYLTFDLVNRIWRD--AG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P    
Sbjct: 74  HDVHYVQNVTDVDDPLFERANRD------GEDWVVLGMRETALFREDMEALRVLPPRDYI 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG---SFSRRKIDE---Q 173
            A   I ++I +++  +  G AY  ++    ++ F  ++   +G    + R  +D+   +
Sbjct: 128 GAVESIGEVIEMVEKFVASGAAYVVDDPEFPDVYFRANATEQFGYESGYDRETMDKFFAE 187

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G   P++  K++P D ++W+   P EP W SP+G GRPGWHIECSA++ + +G  FD+
Sbjct: 188 RGGD--PDRPGKEDPLDALVWRAVRPGEPSWPSPFGPGRPGWHIECSAIALNRIGSGFDV 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L  
Sbjct: 246 QGGGSDLIFPHHEYSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR- 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                G       IRL +L  HYR+   +T Q L +A   L  W   +  +         
Sbjct: 305 -----GEGVDPAAIRLGLLSGHYRQDRPWTEQLLADAHTRLQLWKDAAALESAPSATDTI 359

Query: 354 A-----LYNDLNTVSAIQALHKLARES 375
           A     L +DL+T  A+ AL   AR +
Sbjct: 360 ARLRQHLADDLDTPKALDALDGWARRA 386


>gi|291301962|ref|YP_003513240.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Stackebrandtia nassauensis DSM 44728]
 gi|310947219|sp|D3Q598|MSHC_STANL RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|290571182|gb|ADD44147.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Stackebrandtia nassauensis DSM 44728]
          Length = 431

 Score =  203 bits (517), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/383 (33%), Positives = 200/383 (52%), Gaps = 27/383 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R+        P   RMYVCG T YD  H+G+A  M+ FDV+ R+ R    + 
Sbjct: 19  LRLYDT-ARQAVHATEPHPDGARMYVCGITPYDATHLGHAATMVTFDVINRVWRDNGHD- 76

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TD+D+ + ERA ++       +   ++  + T  F +D   L+ + P     
Sbjct: 77  -VAYVQNVTDVDEPLFERAERD------GEDWVVLGMRETALFREDMEALSIIPPKAYVG 129

Query: 125 ATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTRV 179
           A   +P +  L++ ++  G AY   +   ++ F  ++   +GS S    D   +  G R 
Sbjct: 130 AVESMPTIAALVERLVDAGAAYTVDDGTGDVYFPVTATEGFGSESHYDRDTMLRFFGERG 189

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P++  K++P D +LW+     EP WES  GRGRPGWHIEC+A++  +LG   D++GGG
Sbjct: 190 GDPDRSGKRDPLDALLWRGEREGEPSWESRLGRGRPGWHIECAAIALAHLGDRIDVNGGG 249

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHE   A +  A +    A  ++H G + L+G KMSKS GN + ++ L      
Sbjct: 250 NDLIFPHHEFSAAHAEAATKAVPFAKHYVHAGMIGLDGEKMSKSRGNLVFVSRLRADGVD 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVL 352
                PA VIRLA+L  HYRE   +T +    A   L++W +     +  S       V 
Sbjct: 310 -----PA-VIRLALLDGHYREDRPWTAELHAAAADRLARWREAMGMSSGASGTTTAQRVR 363

Query: 353 SALYNDLNTVSAIQALHKLARES 375
             L +DL+T  A++A+ + A  S
Sbjct: 364 ERLSDDLDTPGALRAVDEWAAAS 386


>gi|85709165|ref|ZP_01040231.1| cysteinyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690699|gb|EAQ30702.1| cysteinyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 486

 Score =  203 bits (516), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 231/490 (47%), Gaps = 74/490 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L R+I EF  I     R+Y CGPTVY++ HIGN R  +  D L R L+   G K
Sbjct: 10  LRLFNSLNRQIEEFVPIHEGEARVYTCGPTVYNYQHIGNMRAYVFADTLGRTLQLK-GLK 68

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            +T+V NITD+     D      + E  +     +   I     + F +D  RL      
Sbjct: 69  -LTHVINITDVGHLTSDADEGEDKMEKMAASQGKSAWDIARFYQEDFERDLARLNVQKKQ 127

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H PRAT ++ +MI   + +    H YE  + + FD S++ +YG  +R   +E +   R+ 
Sbjct: 128 H-PRATQYVEEMIAWGKRVA-DKHCYELESGLYFDVSTVADYGKLARAVTEEGE--GRIE 183

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K+N ADF +W+++   E     W+SPWG+G PGWH+ECS M    LG  FDIH GG
Sbjct: 184 RLEGKRNAADFAIWRKTPEGETRQMEWDSPWGKGAPGWHLECSVMGEALLGFPFDIHTGG 243

Query: 238 LDLIFPHHENEIAQS---CC----ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           +D    HH NEIAQ+   CC    +D     A IW+HN FL     KMSKS+G F+ + +
Sbjct: 244 IDHREIHHPNEIAQNQAYCCSGGLSDATNSGARIWMHNNFLVERSGKMSKSSGEFLRL-Q 302

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQT 340
           LL  K F   ++     R+  L  HYR  ++F+          ++R+  A   L+  P  
Sbjct: 303 LLVDKGFHPHAY-----RMMCLQAHYRSELEFSWEGLEAALTRLKRMIMAVERLADAPSQ 357

Query: 341 STSKGIIDPAVLS----ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
             ++     A L+    A+ +DLNT  A+ AL           D L      A I    V
Sbjct: 358 PVAEHPKFAAPLAKFEEAMSDDLNTAIALTAL----------EDALATKKVDAGIKRAVV 407

Query: 397 CKEHLNKNISIAIEKLVQERLIL----------------------LKMKKFSSADYIRKQ 434
             EH++  + + +  L +  L +                         K F+++D IR +
Sbjct: 408 --EHMDAVLGLDLFSLSRADLRIRPASAEIAEEEIEDALARRKAARAEKDFATSDAIRDE 465

Query: 435 LESKGFILED 444
           L +KG  + D
Sbjct: 466 LAAKGVEVMD 475


>gi|227488922|ref|ZP_03919238.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091106|gb|EEI26418.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 442

 Score =  203 bits (516), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/393 (32%), Positives = 204/393 (51%), Gaps = 35/393 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y++ + +I   +A   +   MYVCG T YD  H+G+A   + FD++YR L+    + 
Sbjct: 49  LNLYDSADDRIKPVKAGKVAT--MYVCGITPYDATHLGHAATYLAFDLIYRQLKANGHD- 105

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TD+DD + ERA ++      N     + +     F  D  +L+   P     
Sbjct: 106 -VHYVQNVTDVDDPLFERAERD------NVDWRELGTSQIDLFRSDMEKLSVFPPQDFVG 158

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDE------QK 174
               + ++I ++Q +I  G  Y  ++    ++    ++   +G  SR   +E      ++
Sbjct: 159 VQEAVDEVIDMVQELIDKGVVYAIDDPEYPDLYVRVNATEQFGYESRFSREEMLDVFAER 218

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G   PE+  KK+P D ++WK + P EP W++P+G GRPGWHIECSA++ + L   FDI 
Sbjct: 219 GGD--PERPGKKDPLDALVWKMARPGEPSWDAPFGAGRPGWHIECSAIARNRLSVPFDIQ 276

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++LLE 
Sbjct: 277 GGGRDLVFPHHEFSAAHAEAATGEPRMAGHYVHGGMIALDGVKMSKSLGNLVFVSKLLEE 336

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
                   PA  IRL++   HYR   DF+   L + E L+ +       P T      + 
Sbjct: 337 GHT-----PA-AIRLSVFSGHYRADRDFSGAILKQCESLVERLRASVDKPSTRAETEALV 390

Query: 349 PAVLSALYNDLNTVSAIQALHKLA-RESTKNHD 380
             +  AL +DL+T  AI A+   A RE T + D
Sbjct: 391 TEIREALADDLDTPRAIAAIEAWANREWTGDSD 423


>gi|172040712|ref|YP_001800426.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|310947168|sp|B1VDU4|MSHC2_CORU7 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2;
           Short=L-Cys:GlcN-Ins ligase 2; AltName: Full=Mycothiol
           ligase 2; Short=MSH ligase 2
 gi|171852016|emb|CAQ04992.1| MshC ligase [Corynebacterium urealyticum DSM 7109]
          Length = 439

 Score =  203 bits (516), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/387 (32%), Positives = 202/387 (52%), Gaps = 36/387 (9%)

Query: 4   KIKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++Y+T + ++       D + + +YVCG T YD  H+G+A     FD++ R LR    
Sbjct: 32  ELRLYDTADDRVKAVALPDDGAPVGIYVCGITPYDSTHLGHAATYNTFDLVNRYLRA--A 89

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPT 120
              VTYV+N+TD+DD + ERA +        D +    +  + T  F  D T+L  L P 
Sbjct: 90  GHGVTYVQNVTDVDDPLFERADR--------DGVDWRELGKEQTDLFRSDMTQLRILPPE 141

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSR------RKID 171
               A   I +++ ++  ++  G AY  + E   I  D +    +G  SR      R++ 
Sbjct: 142 FFVGAMETIDEVVEMVSTLLDKGAAYVVDGEYPDIYADHTYTEQFGYESRYDEATMRELF 201

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            ++ G   PE+  K++P D +LW+     EP W++P+G GRPGWH+EC+A++++ LG+ F
Sbjct: 202 AERGGD--PEREGKRHPLDALLWRAHRTGEPEWDAPFGSGRPGWHVECAAIATNRLGEQF 259

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
            I GGG+DL +PHHE   A +  A   ++ A  ++H G + LEG KMSKS GN   ++ L
Sbjct: 260 AIQGGGVDLRYPHHEYSAAHAEAACGNQRMAGHYVHTGMIGLEGTKMSKSLGNLEFVSAL 319

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------G 345
                   + +    IR+ +   HYRE  D++ + L EAE  L+KW   +  +       
Sbjct: 320 T------AQGFDPAAIRVGLYAGHYREDRDWSAEVLNEAEDRLAKWRAAAAEENNPQRVA 373

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLA 372
            +   V   L NDL+T S ++ L + A
Sbjct: 374 EVLATVTGHLANDLDTPSVLRTLDEWA 400


>gi|326382269|ref|ZP_08203961.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198999|gb|EGD56181.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 416

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/344 (34%), Positives = 181/344 (52%), Gaps = 30/344 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y+T + ++   + + P  +  MYVCG T YD  H+G+A   + FD++ R+LR   G 
Sbjct: 19  LRLYDTSDAQV---KPVSPGEVATMYVCGITPYDATHLGHAATYVTFDLINRVLRD--GG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITD+DD + ERA ++   +   D    + ++    F  D T L  LAP    
Sbjct: 74  HDVHYVQNITDVDDPLFERAERD--GVDWRD----LGAREIDLFRADMTALRVLAPRDYI 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            A   I ++I  +  ++ +G AY  ++    ++ F   + P +G  S    D + M    
Sbjct: 128 GAVESIDEVIDAVGKLLANGSAYVVDDPEFPDVYFSVDATPQFGYES--GYDGETMAKFF 185

Query: 180 ------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K+NP D ++W+ +   EP WESP G GRPGWHIECSA++ + LG  FDI
Sbjct: 186 AERGGDPDRAGKRNPLDALVWRAARDGEPSWESPMGPGRPGWHIECSAIALNRLGMAFDI 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A         + A  ++H G + L+G KMSKS GN + +++L  
Sbjct: 246 QGGGSDLIFPHHEFSAAHGEALTGERRFARHYVHTGMIGLDGEKMSKSLGNLVLVSKLRA 305

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
                G       +RL ++  HYR    +T   LT+ E  L+ W
Sbjct: 306 AGVDAG------AVRLGLMSQHYRADRMWTDDILTDGERRLATW 343


>gi|295839782|ref|ZP_06826715.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB74]
 gi|197697718|gb|EDY44651.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB74]
          Length = 409

 Score =  202 bits (515), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/359 (34%), Positives = 195/359 (54%), Gaps = 30/359 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +    + V YV+N+TD+DD ++ERA ++
Sbjct: 39  RIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDSGRQVHYVQNVTDVDDPLLERAVRD 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +  + +  + T  F +D T L  L P H   A   IP ++ L++ +   G AY
Sbjct: 97  ------GEDWTGLAERETALFREDMTALRMLPPRHYIGAVEAIPGIVPLVERLRERGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E   +I F  +S  ++G  S       R +  ++ G   PE+  KKNP D +LW  +   
Sbjct: 151 ELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERGGD--PERPGKKNPLDPMLWMAAREG 208

Query: 201 EPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+    G GRPGWHIEC A++  +LG  FD+ GGG DL FPHHE   + +       
Sbjct: 209 EPSWDGGSLGDGRPGWHIECVAIALDHLGMAFDVQGGGSDLAFPHHEMGASHAQVLTGEH 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L+G KMSKS GN + +++L   +K G    PA  IRLA+L  HYR  
Sbjct: 269 PFARSYVHAGMVGLDGEKMSKSRGNLVFVSQL---RKDGVD--PA-AIRLALLAHHYRAD 322

Query: 320 IDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            ++T + L EA   L++W      P  + ++ +++  V  AL +DL++  A++A+ + A
Sbjct: 323 WEWTAEGLQEAVDRLARWRAAVSRPDGTPAETLVE-EVRDALADDLDSPRALRAIDRWA 380


>gi|302533542|ref|ZP_07285884.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. C]
 gi|302442437|gb|EFL14253.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. C]
          Length = 409

 Score =  202 bits (515), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 123/347 (35%), Positives = 187/347 (53%), Gaps = 30/347 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  HIG+A     FD++ R+  +   ++ V YV+N+TD+DD ++ERA ++
Sbjct: 39  RLYVCGITPYDATHIGHAATYNAFDLVQRV--WLDNKRQVHYVQNVTDVDDPLLERALRD 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                     + +  + T  F +D T L  L P H   A   IP ++ L++ +   G AY
Sbjct: 97  ------GHDWTELAERETALFREDMTALRMLPPQHYIGAVEAIPGIVPLVERLRDAGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E + ++ F   + P++G  S       R +  ++ G   P++  KKNP D +LW  +   
Sbjct: 151 ELDGDVYFSVEADPDFGGVSHLDAAAMRALSAERGGD--PDRPGKKNPLDPMLWMAAREG 208

Query: 201 EPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+    GRGRPGWHIEC A++  +LG  FDI GGG DL FPHHE   + +       
Sbjct: 209 EPSWDGGSLGRGRPGWHIECVAIALEHLGMGFDIQGGGSDLAFPHHEMGASHAQALTGEF 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L G KMSKS GN + ++ L   ++ G    PA  IRLA+L  HYR  
Sbjct: 269 PMAKAYVHAGMVALHGEKMSKSKGNLVFVSAL---RRAGVD--PA-AIRLALLAHHYRAN 322

Query: 320 IDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLN 360
            ++T   L +AE  L++W      P    ++ +++  V +AL +DLN
Sbjct: 323 WEWTDDVLAQAEARLARWRAAVSRPDGLPAEALVE-EVRAALADDLN 368


>gi|290961655|ref|YP_003492837.1| cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|310947223|sp|C9Z2Z3|MSHC_STRSW RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|260651181|emb|CBG74302.1| putative cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 409

 Score =  202 bits (514), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/343 (34%), Positives = 184/343 (53%), Gaps = 27/343 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T    +     +DP  + R+YVCG T YD  H+G+A     FD++ R+  +  
Sbjct: 17  RDLRIHDTATDGLI---TLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++       D +++   K T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAARDD-----IDWVAL-AEKETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKM 175
              A   IP ++ L++ ++  G AYE   ++ F   + P++G  SR      R +  ++ 
Sbjct: 126 YIGAVEAIPGIVPLVERLLASGAAYELEGDVYFSVEADPDFGKVSRLDAATMRLLSAERG 185

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G   P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ 
Sbjct: 186 GD--PDRAGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQ 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L   
Sbjct: 244 GGGSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSALRRD 303

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
                   PA  IRLA+L  HYR   ++T Q L +A   L +W
Sbjct: 304 GVD-----PA-AIRLALLAHHYRADWEWTDQVLQDAVDRLGRW 340


>gi|329939109|ref|ZP_08288483.1| cysteinyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301994|gb|EGG45887.1| cysteinyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 409

 Score =  202 bits (513), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 203/387 (52%), Gaps = 35/387 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T        Q   P  + R+YVCG T YD  H+G+A     FD++ R+  +  
Sbjct: 17  RDLRIHDTATGAPVTLQ---PGPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++          + +  + T+ F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAERDGLDW------TALAEQETKLFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKM 175
              A   IP ++ L++ +   G AY+   ++ F   S P++G  S       R +  ++ 
Sbjct: 126 YIGAVEAIPGIVPLVERLRELGAAYDLEGDVYFSVESDPHFGEVSHLDAAAMRLLSAERG 185

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G   P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ 
Sbjct: 186 GD--PDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQ 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L   
Sbjct: 244 GGGSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSRLRRD 303

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
                   PA  IRLA+   HYR   ++T Q L +A   L +W      P    ++ +++
Sbjct: 304 GVD-----PA-AIRLALHAHHYRSDWEWTDQVLRDAVARLERWRAAVSRPDGPAAEDMVE 357

Query: 349 PAVLSALYNDLNTVSAIQALHK-LARE 374
            AV +AL +DLN   A+ A+ + +AR+
Sbjct: 358 -AVRAALADDLNAPEALAAVDRWVARQ 383


>gi|227542084|ref|ZP_03972133.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182135|gb|EEI63107.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 442

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 204/393 (51%), Gaps = 35/393 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y++ + +I   +A   +   MYVCG T YD  H+G+A   + FD++YR L+    + 
Sbjct: 49  LNLYDSADDRIKPVKAGKVAT--MYVCGITPYDATHLGHAATYLAFDLIYRQLKANGHD- 105

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TD+DD + ERA ++      N     + +     F  D  +L+   P     
Sbjct: 106 -VHYVQNVTDVDDPLFERAERD------NVDWRELGTSQIDLFRSDMEKLSVFPPQDFVG 158

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDE------QK 174
               + ++I ++Q +I  G  Y  ++    ++    ++   +G  SR   +E      ++
Sbjct: 159 VQEAVDEVIDMVQELIDKGVVYAIDDPEYPDLYVRVNATEQFGYESRFSREEMLDVFAER 218

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G   PE+  K++P D ++WK + P EP W++P+G GRPGWHIECSA++ + L   FDI 
Sbjct: 219 GGD--PERPGKEDPLDALVWKMARPGEPSWDAPFGAGRPGWHIECSAIARNRLSVPFDIQ 276

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++LLE 
Sbjct: 277 GGGRDLVFPHHEFSAAHAEAATGEPRMAGHYVHGGMIALDGVKMSKSLGNLVFVSKLLEE 336

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
                   PA  IRL++   HYR   DF+   L + E L+ +       P T      + 
Sbjct: 337 GHT-----PA-AIRLSVFSGHYRADRDFSGAILKQCESLVERLRASVDKPSTRAEAEALV 390

Query: 349 PAVLSALYNDLNTVSAIQALHKLA-RESTKNHD 380
             +  AL +DL+T  AI A+   A RE T + D
Sbjct: 391 TEIREALADDLDTPRAIAAIEAWANREWTGDSD 423


>gi|119716853|ref|YP_923818.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|310947208|sp|A1SJZ6|MSHC_NOCSJ RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|119537514|gb|ABL82131.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 397

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/331 (34%), Positives = 179/331 (54%), Gaps = 23/331 (6%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A   + FD+L R  R    +  VTYV+N+TD+DD ++ERA + 
Sbjct: 21  RLYVCGITPYDATHLGHASTYVAFDLLNRAWRNAGHD--VTYVQNVTDVDDPLLERAAKV 78

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           H      D + +   + T+ F +D   L  + P H   A   IP +I LI  +   G  Y
Sbjct: 79  H-----VDWVEL-AERETELFRQDMAALRVIPPDHYVGAVESIPLVIELIGRLETAGAIY 132

Query: 147 EANNEIIFDTSSIPNYGS---FSRRKIDE---QKMGTRVPEKYHKKNPADFILWKRSTPM 200
              +++ F  ++ P +G+   + R ++ E   ++ G   P++  KK+P D ++W+     
Sbjct: 133 RVEDDLYFSVTADPAFGAESGWDRERMLEIYPERGGD--PDRPGKKDPLDCVVWRGRREG 190

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           EP WESPWG GRPGWH+EC+A++  +LG  FD+ GGG DL+FPHHE     +  A     
Sbjct: 191 EPSWESPWGPGRPGWHVECTAIAQRHLGGAFDVQGGGSDLVFPHHEMCAGHAQVAVPGTP 250

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A ++ H G +  +G KMSKS GN + ++ L  +            IRLA+L  H+R   
Sbjct: 251 FAQVYSHGGMVGYDGEKMSKSRGNLVFVSALRNSDV------DPMAIRLALLRHHFRSDW 304

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           ++T  +L  A   +++W + + S G   PA 
Sbjct: 305 EWTDDQLWVAVDDIARW-RKALSLGAGAPAA 334


>gi|302561530|ref|ZP_07313872.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302479148|gb|EFL42241.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 409

 Score =  201 bits (512), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/384 (33%), Positives = 200/384 (52%), Gaps = 34/384 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T      +   +DP  + R+YVCG T YD  HIG+A     FD++ R+  +  
Sbjct: 17  RDLRIHDT---ATGDLVTLDPGPVARIYVCGITPYDATHIGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  L P  
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAERDGLDW------TALAERETALFREDMTALRMLPPRQ 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKM 175
              A   IP ++ L++ +   G  YE + +I F   + P++G  S       R +  ++ 
Sbjct: 126 YIGAVEAIPGIVPLVERLRELGATYELDGDIYFSVEADPHFGEVSHLDAAAMRLLSAERG 185

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G   PE+  KK+P D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ 
Sbjct: 186 GD--PERPGKKDPVDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQ 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L   
Sbjct: 244 GGGSDLVFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSTL--- 300

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
           ++ G    PA  IRLA+L  HYR   ++T Q L +A   L  W      P    +  +++
Sbjct: 301 RRDGVD--PA-AIRLALLAHHYRADWEWTDQVLQDAVTRLDHWRAAVSRPDGPPADALVE 357

Query: 349 PAVLSALYNDLNTVSAIQALHKLA 372
             +  AL  DLN  +A+ A+ + A
Sbjct: 358 -EIREALAGDLNAPAALAAVDRWA 380


>gi|311742513|ref|ZP_07716322.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314141|gb|EFQ84049.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 412

 Score =  201 bits (510), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 187/355 (52%), Gaps = 33/355 (9%)

Query: 21  IDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +DP S+ R+YVCG T YD  H+G+A   + FD+L R  R    +  VTY +N+TD+DD +
Sbjct: 36  VDPDSHARLYVCGITPYDATHLGHAATYLAFDLLQRAWRDRGLD--VTYTQNVTDVDDPL 93

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           +ERA     +    D +++  ++ T+ F +D T L  ++P H   A   I  ++ L+  +
Sbjct: 94  LERA-----TATGVDWVTLAEAQ-TELFRQDMTALRIISPDHYVGAVESIDLVVDLVDRL 147

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV------PEKYHKKNPADFIL 193
              G  Y  ++++ FD  +   +GS S   +DE  M          P++  K++P D +L
Sbjct: 148 TGAGATYRVDDDLYFDVHADAGFGSVS--GLDEAAMRAVFAERGGDPDRPGKRHPLDCLL 205

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W+   P EP W++  GRGRPGWHIEC+A++  +LG  FD+ GGG DL+FPHHE   +++ 
Sbjct: 206 WQAERPGEPAWDTRLGRGRPGWHIECAAIALEHLGTTFDVQGGGSDLLFPHHEMSASEAA 265

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A  +   A  ++H G +  +G KMSKS GN + ++ L               IRLA+L 
Sbjct: 266 VATGL-PFAGAFVHTGMVGYQGEKMSKSKGNLVLVSRLRADGH------DPMAIRLALLA 318

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------VLSALYNDLNT 361
            HYR   ++    +  AE  L  W   S     + PA       V +AL +DL+ 
Sbjct: 319 HHYRTDWEWHDDEIVVAEQRLGAW--RSAVHRTVAPAGDALLAEVRAALSDDLDA 371


>gi|61216674|sp|Q8NQC4|MSHC_CORGL RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|21324282|dbj|BAB98907.1| Cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 404

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 201/387 (51%), Gaps = 35/387 (9%)

Query: 5   IKIYNTLERKITEFQ---AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++++T ++++   +   A   + + MYVCG T YD  H+G+A   + FD++YR+L    
Sbjct: 3   LELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL--LD 60

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YV+NITD+DD + ERA ++   +   D    + +     F  D   L+ + P  
Sbjct: 61  NDHDVHYVQNITDVDDPLFERAARD--GVDWRD----LGTSQINLFRSDMEALSIIPPKD 114

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSI---------PNYGSFSRRKID 171
              A   I ++I +++ ++  G AY   +    D  +SI          NY + +  +  
Sbjct: 115 YIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAEFF 174

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            ++ G   PE+  KKNP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  F
Sbjct: 175 AERGGD--PERPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSF 232

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DLIFPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ L
Sbjct: 233 DIQGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRL 292

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                  G       IRL +   HYR   D+  + L  AE  L+ W + + +    + A+
Sbjct: 293 TAAGHEPG------AIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAI 346

Query: 352 L------SALYNDLNTVSAIQALHKLA 372
                  + L  DL+T  A+ A+   A
Sbjct: 347 AVVEQLRAHLSADLDTPGALAAVDNWA 373


>gi|325179782|emb|CCA14185.1| cysteinyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 703

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 154/446 (34%), Positives = 210/446 (47%), Gaps = 81/446 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R    F  I    +  Y+CGPTVYD  H+G+ R    FD   R+L  Y+G +
Sbjct: 35  LKLYNSLTRTKNHFIPIHGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYARRILEDYFGYE 94

Query: 65  CVTYVRNITDIDDKIIERA-----RQEHPS--IPINDAISIIT----------------S 101
            V  V NITDIDDKII RA     +Q +P   +P N    +                  +
Sbjct: 95  -VELVMNITDIDDKIIIRAAENGWKQANPGEDLPTNTEQRVRKVMEWASEQSAEENMKRT 153

Query: 102 KNTQQ-----FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           K+  Q     F+ D   L    PT   R + ++  +I L+Q II +G AYE+N  + FDT
Sbjct: 154 KDLSQFWEASFLHDMASLGIKIPTVITRVSEYVDDIILLVQGIINNGFAYESNGSVYFDT 213

Query: 157 -----SSIPNYGSFSRRKIDEQKM-----GTRVPE-----KYHKKNPADFILWKRSTPME 201
                SS   YG      I +  +     G+            K+  +DF+LWK+S   E
Sbjct: 214 NTFSQSSGKAYGKLLPENIGQSDLLAEGEGSLAANPTLLGNSDKRGASDFVLWKKSKNGE 273

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGGGLDLIFPHHENEIAQSCCADR 257
           P W SPWG GRPGWHIECSAM+S  L +      DIH GG+DL FPHH+NEIAQS     
Sbjct: 274 PFWVSPWGPGRPGWHIECSAMASSTLQRFADGQIDIHSGGIDLRFPHHDNEIAQSEAYFN 333

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
             +  N ++H G LN+EG KMSKS  NF+ I + L           +  +R   L+  Y 
Sbjct: 334 FSQWINYFLHTGHLNIEGLKMSKSLKNFVKIKDALMDHS-------SRQLRFLFLLHKYN 386

Query: 318 EPIDFTVQRLTEAEIL----------------------LSKWPQTSTS--KGII--DPAV 351
            P+D+    + EA ++                        +W Q        I+     V
Sbjct: 387 VPMDYNDHSVEEAVVVDRFFNEFFQNVKVQLRLLGMTNAQRWEQRDIQLHDAIVACKENV 446

Query: 352 LSALYNDLNTVSAIQALHKLARESTK 377
             AL NDLNT  AI  L +LA+E ++
Sbjct: 447 HQALANDLNTPQAILHLQQLAKEVSR 472


>gi|300781182|ref|ZP_07091036.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532889|gb|EFK53950.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 412

 Score =  200 bits (509), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/389 (32%), Positives = 197/389 (50%), Gaps = 47/389 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +++T +++  E      ++   I MYVCG T YD  H+G+A   + FD+++R L    
Sbjct: 19  LTLFDTADQQAKEVDTTATTSGGEIGMYVCGITPYDSTHLGHAATYLTFDLVHRQLNA-- 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAP 119
               V YV+NITD+DD + ERA +        D +    +    T  F  D   L+ + P
Sbjct: 77  NGHSVHYVQNITDVDDPLFERAER--------DGVDWRELGQSQTDLFRTDMEILSVIPP 128

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP--------------NYGSF 165
                A   + ++I ++Q ++ +G AYE    ++ D+   P               Y S 
Sbjct: 129 RDYIGAMESVDEVIAMVQTLLDNGSAYE----LVDDSGDHPVTDIYAPITATEQFGYESN 184

Query: 166 SRRKIDEQKMGTRV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
             R   E+    R   PE+  K++P D +LW+     EP WE+ +G GRPGWHIECSA++
Sbjct: 185 LDRATMEEYFAERGGDPERTGKRDPLDALLWRGHREGEPSWEARFGAGRPGWHIECSAIA 244

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           ++ LG  F I GGG DL FPHHE   A +  A  + + A  ++H G + L+G KMSKS G
Sbjct: 245 TNRLGTQFAIQGGGSDLAFPHHEFSAAHAEAAYDVPRMAGHYVHAGMIALDGVKMSKSLG 304

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           N + +++L E          A  IRLA+   HYR+  DF+   L +AE  L+ W +   +
Sbjct: 305 NLVFVHKLREEGH------DASAIRLAVFGGHYRDDRDFSYAVLDQAEQRLANWREALAN 358

Query: 344 KGIIDPAV------LSALYNDLNTVSAIQ 366
           +   D AV       +AL +DLNT  A++
Sbjct: 359 EVSEDEAVGTVDKLRAALADDLNTPEALR 387


>gi|19552728|ref|NP_600730.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390397|ref|YP_225799.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325734|emb|CAF21523.1| PUTATIVE CYSTEINE TRNA SYNTHETASE [Corynebacterium glutamicum ATCC
           13032]
          Length = 420

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/387 (32%), Positives = 201/387 (51%), Gaps = 35/387 (9%)

Query: 5   IKIYNTLERKITEFQ---AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++++T ++++   +   A   + + MYVCG T YD  H+G+A   + FD++YR+L    
Sbjct: 19  LELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL--LD 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YV+NITD+DD + ERA ++   +   D    + +     F  D   L+ + P  
Sbjct: 77  NDHDVHYVQNITDVDDPLFERAARD--GVDWRD----LGTSQINLFRSDMEALSIIPPKD 130

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSI---------PNYGSFSRRKID 171
              A   I ++I +++ ++  G AY   +    D  +SI          NY + +  +  
Sbjct: 131 YIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAEFF 190

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            ++ G   PE+  KKNP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  F
Sbjct: 191 AERGGD--PERPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSF 248

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DLIFPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ L
Sbjct: 249 DIQGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRL 308

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                  G       IRL +   HYR   D+  + L  AE  L+ W + + +    + A+
Sbjct: 309 TAAGHEPG------AIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAI 362

Query: 352 L------SALYNDLNTVSAIQALHKLA 372
                  + L  DL+T  A+ A+   A
Sbjct: 363 AVVEQLRAHLSADLDTPGALAAVDNWA 389


>gi|296139847|ref|YP_003647090.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Tsukamurella paurometabola DSM 20162]
 gi|310947226|sp|D5UPJ5|MSHC_TSUPD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296027981|gb|ADG78751.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Tsukamurella paurometabola DSM 20162]
          Length = 414

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 133/412 (32%), Positives = 208/412 (50%), Gaps = 36/412 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y+T ++ +   ++++P  +  MYVCG T YD  H+G+A   + FD++ R+LR    E
Sbjct: 19  LRLYDTSDQAV---RSVNPGAVSGMYVCGITPYDATHLGHAATYLTFDLINRVLRANGHE 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD + ERA ++   I   D    + ++ T  F +D   L  LAP    
Sbjct: 76  --VHYVQNVTDVDDPLFERAARD--GIDWRD----LGARETDLFCEDMQALRVLAPQDYI 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG--SFSRRKIDEQKMGT 177
            A   I ++I L+  ++ +G AY  ++    ++ + T +   +G  S   R   E+    
Sbjct: 128 GAVESIDEVIALVGRLLENGAAYIVDDPEFPDVYYRTDATEQFGYESGYDRATMERFFAE 187

Query: 178 RV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           R   P++  K++P D +LW+ + P EP W SP G GRPGWHIEC+A++ + LG  FDI G
Sbjct: 188 RGGDPDRPGKRDPLDALLWRAARPGEPSWPSPQGPGRPGWHIECAAIAQNRLGVGFDIQG 247

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A         + A  ++H   + L+G KMSKS GN + ++ L    
Sbjct: 248 GGSDLIFPHHEFSAAHVEADTGERRFARHYVHAAMIGLDGEKMSKSRGNLVFVSTLRRAG 307

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA- 354
                  PA  IRL +   HYR    ++ + L  A+  L  W     +    D A L   
Sbjct: 308 VD-----PA-AIRLGLFEGHYRTDRAWSDEVLARAQARLDLWRNAFAAASSPDGAELVGR 361

Query: 355 ----LYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEVC 397
               L +DL+T  A+ AL   A  +  +    P     +  A   +LG+ V 
Sbjct: 362 LRRYLADDLDTPKALSALDAWAHRAVTSGGPDPDGPSTVATAVDALLGVAVS 413


>gi|288923721|ref|ZP_06417819.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EUN1f]
 gi|288344927|gb|EFC79358.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EUN1f]
          Length = 401

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 112/316 (35%), Positives = 169/316 (53%), Gaps = 22/316 (6%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCG T YD  H+G+A   + +D++ R+LR    E  V YV+N+TD+DD ++ERA ++ 
Sbjct: 12  LYVCGITPYDATHLGHAFTYLTYDLVQRVLRDAGHE--VRYVQNVTDVDDPLLERADRD- 68

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             I   D    +  +    F  D T L  L P H       +P ++ +I  ++  G AY 
Sbjct: 69  -GIDWRD----LARREIDLFRADMTALRVLPPDHYVGVVEAVPLIVEMIGQLVERGAAYS 123

Query: 148 ANNEIIFDTSSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
              ++ F  SS   +G  +         +  ++ G   P +  KK+P D +LW+   P E
Sbjct: 124 VEGDLYFSVSSAKEFGEVAGLSPAQMLALAAERGGD--PGRPGKKDPLDPLLWRAERPGE 181

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           P W SP+G GRPGWH+ECSA++ H+LG   DI GGG DL+FPHHE   A +  A      
Sbjct: 182 PSWPSPFGPGRPGWHVECSAIARHHLGAPIDIQGGGSDLVFPHHECSAAHAEVAGGTAPF 241

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
           A  ++H   + L+G KMSKS GN   ++ LL      G + PA  IRLA+L  H+    +
Sbjct: 242 ARAYVHTAMVGLDGHKMSKSRGNLEFVSRLL-----AGGADPA-AIRLALLHHHHTVEWE 295

Query: 322 FTVQRLTEAEILLSKW 337
           +T   L  A++++ +W
Sbjct: 296 WTPADLPAADLMVRRW 311


>gi|302527180|ref|ZP_07279522.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. AA4]
 gi|302436075|gb|EFL07891.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. AA4]
          Length = 412

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 135/388 (34%), Positives = 199/388 (51%), Gaps = 36/388 (9%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           RMYVCG T YD  H+G+A   + FD++ R+ R    E  V YV+N+TDID+ ++ERA ++
Sbjct: 39  RMYVCGITPYDATHLGHAATYLAFDLVNRIWRDNGHE--VHYVQNVTDIDEPLLERAERD 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                 +D   ++  + T  F +D   L  L P     A   IP+++ +I  ++  G AY
Sbjct: 97  ------SDDWIVLGMRETALFREDMEALRVLPPRQFVGAVEAIPEIVEVIAKLLADGSAY 150

Query: 147 EANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV------PEKYHKKNPADFILWKR 196
            A++    ++ FD ++   +G  S    D + M          P++  K++P D +LW+ 
Sbjct: 151 RADDAEFPDVYFDHNATGRFGYES--SYDAETMAKFFAERGGDPDRPGKRHPLDALLWRV 208

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           +   EP WES  G GRPGWHIECSA++ + LG  FD+ GGG DLIFPHHE   A +    
Sbjct: 209 AREGEPSWESELGAGRPGWHIECSAIAVNRLGLGFDVQGGGSDLIFPHHEYSAAHAEAVA 268

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                A  ++H G + L+G KMSKS GN + ++ L    +  G   PA  IRLA+   HY
Sbjct: 269 ADHPFARHYVHAGMIGLDGEKMSKSRGNLVFVSRL----RADGVD-PA-AIRLALFAGHY 322

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-----LYNDLNTVSAIQALH-- 369
           RE   +T Q L +A+  L++W +        D     A     L +DLNT  A+ A+   
Sbjct: 323 REDRAWTDQLLVDAQERLARWREAVALPAGPDAEDTVARLRDHLSDDLNTPKALTAIDAW 382

Query: 370 ---KLARESTKNHDLLPIFNASAHILGI 394
               L R+ T       I  A   +LGI
Sbjct: 383 VTSALRRDGTDQAAPGLIKEAVDALLGI 410


>gi|324997324|ref|ZP_08118436.1| cysteinyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 412

 Score =  200 bits (509), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/361 (33%), Positives = 190/361 (52%), Gaps = 27/361 (7%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD++ RL R    E  V YV+N+TDID+ ++ERA ++ 
Sbjct: 40  MYVCGITPYDATHLGHAATYLAFDLVNRLWRDLGHE--VHYVQNVTDIDEPLLERAERD- 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 D   ++  + T  F +D   L  L P     A   IP++  L++ ++  G AY 
Sbjct: 97  -----QDDWVVLGLRETALFREDMEALRVLPPRQFVGAVEAIPEIAELVEKLVASGAAYR 151

Query: 148 ANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PEKYHKKNPADFILWKRSTP 199
            ++    ++  D S+   +G  S   ++     +R     P++  K+NP D +LW+ + P
Sbjct: 152 LDDPEYPDVYHDVSATGRFGYESNYDLETMLQFSRERGGDPDRPGKRNPLDPLLWRMARP 211

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP WES  GRGRPGWH+EC+A+  + LG+  D++GGG DLIFPHHE     +       
Sbjct: 212 GEPAWESGLGRGRPGWHVECAAIGLNRLGQQIDLNGGGSDLIFPHHECGALHAESLTGEH 271

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L+G KMSKS GN + +++L  +           V+R+A+L  HYR+ 
Sbjct: 272 PFARHYVHTGMIGLDGEKMSKSKGNLVFVSKLRSSGV------DPNVVRVALLDGHYRDD 325

Query: 320 IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-----LYNDLNTVSAIQALHKLARE 374
             +T +   + E  +++W +        D A L A     L +DL+T  A+ A+   A E
Sbjct: 326 RSWTDEVHAKGEGRVARWREAVELDAGPDAAELVAKLRTHLADDLDTPGALAAVDAWADE 385

Query: 375 S 375
           +
Sbjct: 386 A 386


>gi|153217385|ref|ZP_01951136.1| cysteinyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113603|gb|EAY32423.1| cysteinyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 314

 Score =  200 bits (508), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 166/327 (50%), Gaps = 37/327 (11%)

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
           S    YG  S++ +D+ + G RV  +  K++P DF+LWK S P EP WESPWG GRPGWH
Sbjct: 2   SQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWH 61

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECSAM+S  LG  FDIHGGG DL FPHHENEIAQSCCA   +   N W+H+G + ++  
Sbjct: 62  IECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQYV-NTWMHSGMVMVDKE 120

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GNF TI ++L         + A  +R  ++  HYR  ++++ + L +A   L +
Sbjct: 121 KMSKSLGNFFTIRDVL-------GHYDAETVRYFLMSGHYRSQLNYSEENLNQARASLER 173

Query: 337 WPQTSTSKGIIDPAV---------LSALYNDLNTVSAIQALHKLARE--------STKNH 379
                       PA           +A+ +D NT  A   L  +ARE         T   
Sbjct: 174 LYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNAS 233

Query: 380 DLLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
            L  +    A ++GI         +       +  IE L++ R      K +++AD  R 
Sbjct: 234 ALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARD 293

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
           +L   G +LED      G   T W++K
Sbjct: 294 KLNEMGIVLED------GPNGTTWRRK 314


>gi|320165548|gb|EFW42447.1| cysteine-tRNA ligase [Capsaspora owczarzaki ATCC 30864]
          Length = 582

 Score =  200 bits (508), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/413 (33%), Positives = 207/413 (50%), Gaps = 66/413 (15%)

Query: 6   KIYNTLERKITEFQAID------------PSNIRMYVCGPTVYDFAHIGNARPMIVFDVL 53
           + YN L R +    + D            P+ +  Y+CGPTVYD AH+G+A   + FD++
Sbjct: 72  RAYNALTRSVAPLLSPDSNSNSHTRSDLTPNTLSWYICGPTVYDEAHLGHASCYVRFDII 131

Query: 54  YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
            R+L    G + V  +  +TDIDDKII +A         N + S +  +  + FV+D   
Sbjct: 132 RRILTDRAGLR-VFQLMGMTDIDDKIIAKAAS------TNRSHSEVARQFEESFVQD--- 181

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPN-YGSFS-RRKI 170
           +A   P    R T  IP +   I NII  G  Y A++  + FDT +  + YG        
Sbjct: 182 MAVRPPDAISRVTESIPAIQQFITNIIERGFGYTASDGSVYFDTQAFGSRYGKLRPSATA 241

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRS-TPMEPGWESPW--GRGRPGWHIECSAMSSHYL 227
           D+       P   +K++P DF LWK + +  EPG+ SP+  G GRPGWHIECSA++    
Sbjct: 242 DKSSAEATEPADSNKRSPRDFALWKATKSASEPGYPSPFSQGLGRPGWHIECSAIA--VF 299

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+  DIH GG+DL+FPHHENEIAQ      +++ A+ + H G L +   KMSKS  NF+T
Sbjct: 300 GQHLDIHSGGIDLLFPHHENEIAQCEAHHGVDQWAHHFWHTGHLLINKEKMSKSLNNFVT 359

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTEAEILLSKWP---QTS 341
           I + L       RS+ +   RL  L+T+YR+ + F   T+Q     E  L+++    QT+
Sbjct: 360 IKDFL-------RSYTSNQFRLFCLLTNYRQSVHFDDKTMQGAIALERKLAQFGAVLQTA 412

Query: 342 TSKGI-----------------------IDPAVLSALYNDLNTVSAIQALHKL 371
            + G+                        +  V +AL ND +T +A+QA   L
Sbjct: 413 GATGVAWDSPATRAWGTSEVALRDRILTFEATVDAALCNDFDTSTAMQAAMTL 465


>gi|203288037|ref|YP_002223052.1| cysteinyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085257|gb|ACH94831.1| cysteinyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 485

 Score =  200 bits (508), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 155/499 (31%), Positives = 241/499 (48%), Gaps = 68/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  + ++E + +  S  ++Y CGPTVY++AHIGN R  I  D+L + L+ +  + 
Sbjct: 7   LKLYNTKTKCLSEVKNL--SETKIYACGPTVYNYAHIGNLRTYIFEDLLIKSLKLF--KY 62

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+++ A++    + + D    I+   T+ F  D  +L
Sbjct: 63  NVNYAMNITDIGHLTGDFDDGEDKVVKAAKER--GLTVYD----ISRFFTKAFFDDCKKL 116

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
             L P     A+ +I  MI +++ +  +G  Y  N  + FD S   NYG  +   +++  
Sbjct: 117 NILYPDKVLVASEYILDMIEVVKVLEKNGFTYFVNGNVYFDISRFKNYGQMAGINLNDIN 176

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +   +RV   + K+N +DF+LW  ++     E  W+SPWG G P WH+EC+ M+ +Y   
Sbjct: 177 ENSVSRVELDFSKRNKSDFVLWFTNSKFQNQEMKWDSPWGFGYPSWHLECATMNLNYFNS 236

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             +IH GG+D I  HH NEIA   C    +   +++IH  FL +E  KMSKSN +FITI 
Sbjct: 237 TLNIHLGGIDHIRVHHVNEIAIMECY-LGKNWCDMFIHGEFLIMENEKMSKSNNDFITIK 295

Query: 290 ELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSK 344
             LE + F      +P+  R   L  HYR  + FT   L   ++    LLSK     +S 
Sbjct: 296 N-LEDEGF------SPLDFRYFCLTAHYRTQLKFTFHSLKACKVARENLLSKLTSCYSSL 348

Query: 345 GIIDPAVLSA--------------------LYNDLNTVSAIQALHKLARE---STKNHDL 381
              D ++LS                     +  DLN    +  L  + R+   S+ +   
Sbjct: 349 SQFDISLLSQDDENIEFILEHKYYDSFLERIAFDLNIPKVLALLWDIVRDNNLSSLSKLK 408

Query: 382 LPIFNASAHILGI--EVCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLES 437
           L         LG+  E+ +E     I I   +  L++ER +    K F  AD IR+   S
Sbjct: 409 LAFKFDEVLSLGLREEILREIDMSRIVIDDVMNSLIEERRLAKLKKDFKRADEIREYCRS 468

Query: 438 KGFILEDYKNPDNGQRMTR 456
           KGFIL D    + G ++ R
Sbjct: 469 KGFILID---TEEGTKVKR 484


>gi|321309540|ref|YP_004191869.1| cysteinyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801384|emb|CBY92030.1| cysteinyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 424

 Score =  199 bits (507), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 140/459 (30%), Positives = 220/459 (47%), Gaps = 65/459 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++LE+ +       P + ++Y+CGPTVYD+ HIGN  P+I+FD L R L Y    +
Sbjct: 3   LKLYDSLEQTLKTL----PKDPKIYLCGPTVYDYVHIGNVAPLIIFDFLIRYLEY--KRE 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              Y+ NITDIDDKI+ +A++      ++     I S+ T  ++     L  + PT  P+
Sbjct: 57  NYLYIHNITDIDDKIVNKAKE------LSLKEEEIASEYTDHYLWVMNALNVIKPTLMPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HI  +   + +++  G A+    +++ +   I NYG  S++ ++             
Sbjct: 111 VSDHIEDIQRDVSSLLESGFAHFEGKDVVMNIGKIKNYGCLSKQNLN------------M 158

Query: 185 KKNPADFILWKRSTPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            K+  +F LWK    ME G  W+SPWG GRPGWH EC +  + Y     D+HGGG+DL F
Sbjct: 159 LKSNENFCLWKY---MENGKTWKSPWGDGRPGWHSECFSFINRYSRGGVDLHGGGIDLKF 215

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE A S  A   +  + IW++ G L  +  K+SKS      + +LLE        +
Sbjct: 216 PHHENENAHS-EALYSKSLSKIWMYIGHLQTQDGKISKSTNKKFLVKDLLE-------KY 267

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTE--------------AEILLSKWPQTSTSKGIID 348
            A  +R   L + Y  P+     R+ E              A+  L        S G +D
Sbjct: 268 SANSLRYLFLTSKYSLPLLVDESRIEEVGKEFDNYLLTINQAKTYLYLNGGEINSAGDLD 327

Query: 349 PAVLSALYNDLNTVSAIQALHKLARE---STKNHDLLPIFNASAHI------LGIEVCKE 399
              LS   NDLN    +  L KL +E     K   +  +    + +      LG ++  E
Sbjct: 328 SEFLSIFENDLNLPEVLTWLQKLKKEVLTGIKEKKIEVVSKGGSQLIRHLEFLGFKIEDE 387

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           H  +N++     L+ E    L  K +S AD IR+ L+ +
Sbjct: 388 HTVENVA-----LIDEWKNSLANKDYSKADEIRELLKRR 421


>gi|227504344|ref|ZP_03934393.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198992|gb|EEI79040.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 412

 Score =  199 bits (507), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 127/385 (32%), Positives = 198/385 (51%), Gaps = 35/385 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGE 63
           + +Y++ +  I + + +      MYVCG T YD  H+G+A   + FD+ YR LL   Y  
Sbjct: 19  LHLYDSADETIRKVE-VSGETATMYVCGITPYDSTHLGHAATYLTFDLAYRQLLDNGY-- 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITD+DD + ERA ++       D   + TS+    F  D   L+ L P    
Sbjct: 76  -QVHYVQNITDVDDPLFERAERDGV-----DWRELGTSQ-INLFRSDMELLSVLPPQDYV 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDE------Q 173
            A   I ++  ++  +I  G AY  ++    ++     +  N+G  S     E      +
Sbjct: 129 GAMEVIDEVTEMVSKLIDAGAAYVVDDPEFPDVYASIDATKNFGYESNYTAAEMAEFFAE 188

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           + G   P++  K+NP D ++W+     EP W+SP+G GRPGWHIECSA++++ LG  FDI
Sbjct: 189 RGGD--PDRPGKRNPLDALVWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGAPFDI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   A +  A  +E+ A +++H G + L+G KMSKS GN + +++L+E
Sbjct: 247 QGGGSDLKFPHHEFSAAHAEAALGVERMAQVYVHTGMIGLDGVKMSKSLGNLVFVHKLVE 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
                        IRL +   HYR   D++ + L +A   L  W     + G ++     
Sbjct: 307 AGV------DPSAIRLGVFAGHYRAERDWSDEVLEQANERLGVWRDALQNPGSLEVAQEL 360

Query: 349 -PAVLSALYNDLNTVSAIQALHKLA 372
             A+  AL NDL+T + + A+   A
Sbjct: 361 VAAIRGALANDLDTPAVLAAVDAWA 385


>gi|195436238|ref|XP_002066076.1| GK22127 [Drosophila willistoni]
 gi|194162161|gb|EDW77062.1| GK22127 [Drosophila willistoni]
          Length = 491

 Score =  199 bits (506), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/321 (36%), Positives = 171/321 (53%), Gaps = 29/321 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +  Y CGPTVYD AH+G+A   +  D++ R+LR Y+    VT + NITD+DDKII RAR+
Sbjct: 2   VSWYTCGPTVYDSAHLGHASTYVKVDIIQRILRDYFRINLVTAM-NITDVDDKIIRRARE 60

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              +         +      +F +D   L    P  +   + +I  +   I  +I +  A
Sbjct: 61  SGCNWLD------MARAYEAEFREDMLSLNVQPPDIRSHVSANIDNIQRFINELISNEQA 114

Query: 146 YEANN-EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWK-RSTP 199
           Y   +  + FD S   +YG   R  ID      + GT      HK++ +DF LWK +  P
Sbjct: 115 YVTKDYSVYFDVSKAVHYGKLQRADIDSSTEPGEQGT------HKRHRSDFALWKAKKFP 168

Query: 200 MEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
            EP W + WG  GRPGWHIECSA++  + G+  D H GGLDL FPHHENE AQ C     
Sbjct: 169 DEPSWPASWGGEGRPGWHIECSAIAGMFFGRRLDFHAGGLDLRFPHHENEEAQCCARYET 228

Query: 259 EKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
           ++  N W+H G L++ G   KMSKS  N I+++ELL       + + A   R+A L+++Y
Sbjct: 229 DQWVNYWMHTGQLHVAGDKDKMSKSLKNTISVSELL-------KHYTADEFRMACLLSNY 281

Query: 317 REPIDFTVQRLTEAEILLSKW 337
           R  + ++ Q +  A   L K+
Sbjct: 282 RNAMPYSDQLMITARQTLQKF 302


>gi|239978594|ref|ZP_04701118.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 385

 Score =  199 bits (506), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 196/362 (54%), Gaps = 34/362 (9%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TD+DD ++ERA   
Sbjct: 15  RLYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDDPLLERA--- 69

Query: 87  HPSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
                + D +  + +  + T  F +D T L  + P     A   IP++I L++ +   G 
Sbjct: 70  -----VRDGVEWTGLAERETALFREDMTALRMIPPRDYIGAVEAIPRIIPLVERLRDAGA 124

Query: 145 AYEANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           AYE   ++ F   + P++G  S       R +  ++ G   PE+  KKNP D +LW  + 
Sbjct: 125 AYELEGDLYFSVEADPHFGEVSHLDATAMRLLSAERGGD--PERPGKKNPLDPMLWMAAR 182

Query: 199 PMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W+    G+GRPGWHIEC A++  +LG  FD+ GGG DL+FPHHE   + +  A  
Sbjct: 183 EGEPSWDGGSLGQGRPGWHIECVAIALDHLGMGFDLQGGGSDLVFPHHEMGASHAHAATG 242

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A+ ++H G + L+G KMSKS GN + ++ L   ++ G    PA  IRLA+   HYR
Sbjct: 243 EYPFAHSYVHAGMVALDGEKMSKSKGNLVFVSAL---RRAGVE--PA-AIRLALHAHHYR 296

Query: 318 EPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
              ++T   L EA   L++W      P    +  +++  V +AL +DL+  +A++A+   
Sbjct: 297 ADWEWTDATLQEATRRLARWRAAVSRPDGPDASAVVE-QVRAALADDLDAPAALRAVDAW 355

Query: 372 AR 373
           A+
Sbjct: 356 AQ 357


>gi|145295647|ref|YP_001138468.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|310947181|sp|A4QEA0|MSHC_CORGB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|140845567|dbj|BAF54566.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 420

 Score =  199 bits (506), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 201/387 (51%), Gaps = 35/387 (9%)

Query: 5   IKIYNTLERKITEFQ---AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++++T ++++   +   A   + + MYVCG T YD  H+G+A   + FD++YR+L    
Sbjct: 19  LELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL--LD 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YV+NITD+DD + ERA ++   +   D    + +     F  D   L+ + P  
Sbjct: 77  NDHDVHYVQNITDVDDPLFERAARD--GVDWRD----LGTSQINLFRSDMEALSIIPPKD 130

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSI---------PNYGSFSRRKID 171
              A   I ++I +++ ++  G AY   +    D  +SI          NY + +  +  
Sbjct: 131 YIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAEFF 190

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            ++ G   P++  KKNP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  F
Sbjct: 191 AERGGD--PDRPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSF 248

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DLIFPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ L
Sbjct: 249 DIQGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRL 308

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                  G       IRL +   HYR   D+  + L  AE  L+ W + + +    + A+
Sbjct: 309 TAAGHEPG------AIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAI 362

Query: 352 L------SALYNDLNTVSAIQALHKLA 372
                  + L  DL+T  A+ A+   A
Sbjct: 363 AVVEQLRAHLSADLDTPGALAAVDNWA 389


>gi|291450490|ref|ZP_06589880.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353439|gb|EFE80341.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 409

 Score =  199 bits (506), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/362 (33%), Positives = 196/362 (54%), Gaps = 34/362 (9%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TD+DD ++ERA   
Sbjct: 39  RLYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDDPLLERA--- 93

Query: 87  HPSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
                + D +  + +  + T  F +D T L  + P     A   IP++I L++ +   G 
Sbjct: 94  -----VRDGVEWTGLAERETALFREDMTALRMIPPRDYIGAVEAIPRIIPLVERLRDAGA 148

Query: 145 AYEANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           AYE   ++ F   + P++G  S       R +  ++ G   PE+  KKNP D +LW  + 
Sbjct: 149 AYELEGDLYFSVEADPHFGEVSHLDATAMRLLSAERGGD--PERPGKKNPLDPMLWMAAR 206

Query: 199 PMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W+    G+GRPGWHIEC A++  +LG  FD+ GGG DL+FPHHE   + +  A  
Sbjct: 207 EGEPSWDGGSLGQGRPGWHIECVAIALDHLGMGFDLQGGGSDLVFPHHEMGASHAHAATG 266

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A+ ++H G + L+G KMSKS GN + ++ L   ++ G    PA  IRLA+   HYR
Sbjct: 267 EYPFAHSYVHAGMVALDGEKMSKSKGNLVFVSAL---RRAGVE--PA-AIRLALHAHHYR 320

Query: 318 EPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
              ++T   L EA   L++W      P    +  +++  V +AL +DL+  +A++A+   
Sbjct: 321 ADWEWTDATLQEATRRLARWRAAVSRPDGPDASAVVE-QVRAALADDLDAPAALRAVDAW 379

Query: 372 AR 373
           A+
Sbjct: 380 AQ 381


>gi|120404450|ref|YP_954279.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|310947205|sp|A1TAS3|MSHC_MYCVP RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|119957268|gb|ABM14273.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 429

 Score =  199 bits (505), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 125/390 (32%), Positives = 199/390 (51%), Gaps = 39/390 (10%)

Query: 4   KIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++Y++ +R++   + + P +   MYVCG T YD  H+G+A   + FD+++RL R    
Sbjct: 35  QLRLYDSADRQV---RPVAPGATATMYVCGITPYDATHLGHAATYLTFDLVHRLWRD--S 89

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPT 120
              V YV+NITD+DD + ERA++        D I    +  + T+ F +D   L  L P 
Sbjct: 90  GHDVHYVQNITDVDDPLFERAQR--------DGIGWRELGDRETELFREDMAALRVLPPR 141

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKID----- 171
               AT  I +++ L++ ++  G AY  ++    ++ F   +   +G  S    D     
Sbjct: 142 DYVAATEAIAEVVELVEKMLAAGAAYVVDDPQYPDVYFRADATVQFGYESGYDRDTMLAL 201

Query: 172 -EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
             ++ G   P++  K +P D +LW    P EP W SP+G GRPGWH+EC+A++   +G  
Sbjct: 202 FAERGGD--PDRPGKSDPLDALLWLAERPGEPSWPSPFGPGRPGWHVECAAIALSRIGTG 259

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DI GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++
Sbjct: 260 LDIQGGGSDLIFPHHEFSAAHAECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQ 319

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           L           PA  IRL +   HYR+   ++   L EA   L +W   +   G  D  
Sbjct: 320 LRRDGVD-----PA-AIRLGLFAGHYRDDRFWSPAVLDEALARLHRWRSATALAGAPDAT 373

Query: 351 VLSA-----LYNDLNTVSAIQALHKLARES 375
            + A     L +DL+T  A+ AL   A ++
Sbjct: 374 DVVARVRRYLADDLDTPKALAALDGWATDA 403


>gi|227549273|ref|ZP_03979322.1| cysteinyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078592|gb|EEI16555.1| cysteinyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 404

 Score =  199 bits (505), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/408 (32%), Positives = 211/408 (51%), Gaps = 36/408 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++K+Y+T ++ +        ++  + MYVCG T YD  H+G+A   + FD++ R L    
Sbjct: 18  ELKLYDTADQVVKPVDTTPNAHGEVGMYVCGITPYDSTHLGHAATYLTFDLVQRQL-IAN 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAP 119
           G + V YV+NITD+DD + ERA +        D +    +       F  D   L  + P
Sbjct: 77  GHR-VHYVQNITDVDDPLFERAAR--------DGVDWRELGQSQIDLFRSDMGILGVIPP 127

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMG 176
                A   + ++I ++  ++    AY  ++  I+   D ++   Y S   R+  E    
Sbjct: 128 RDYIGAIESVNEVIEMVGKLLDASAAYRLDHGDIYASIDATAQFGYESNYSREEMETYFA 187

Query: 177 TRV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            R   PE+  K++P D ++W+     EP W+SP+G GRPGWHIECSA++++ LG  F I 
Sbjct: 188 ERGGDPERPGKRDPLDALVWRGHRDGEPAWDSPFGPGRPGWHIECSAIATNRLGATFAIQ 247

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   A +  A R  + A  ++H G + L+G KMSKS GN + +++L E 
Sbjct: 248 GGGSDLAFPHHEFSAAHAEAAYRQRRMATHYVHAGMIALDGVKMSKSLGNLVFVHKLTE- 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDPAVL- 352
                +   A  IRLA+   HYR   DF+   L  AE  L++W    +   G +D AV+ 
Sbjct: 307 -----KGHEASAIRLAVFAEHYRTDRDFSDAILVAAEQRLARWRDNLARPVGQVDAAVVV 361

Query: 353 ----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
               +AL +DL+T +A+    ++  E+  +H+   I  A   +LG+ V
Sbjct: 362 DKLRAALADDLDTAAAL----RIIDEAAGDHE-GAIARAIDGLLGVRV 404


>gi|145223636|ref|YP_001134314.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|310947196|sp|A4TB85|MSHC_MYCGI RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|145216122|gb|ABP45526.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 444

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 200/397 (50%), Gaps = 41/397 (10%)

Query: 4   KIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++++++ +R+I   + + P +   MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 50  QLRLFDSADRQI---RPVSPGATATMYVCGITPYDATHLGHAATYLTFDLVNRVWRDSGH 106

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPT 120
           +  V YV+NITD+DD + ERA +        D I    +  + T  F +D   L  + P 
Sbjct: 107 D--VHYVQNITDVDDPLFERAAR--------DGIGWRELGDRETDLFREDMAALRVVPPR 156

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMG 176
               AT  I ++I +++ ++  G AY  ++    ++ F   +   +G  S    D + M 
Sbjct: 157 DYVAATEAIAEVIEVVEKLLASGAAYVVDDAQYPDVYFHAGATVQFGYES--GYDRETML 214

Query: 177 TRV------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
                    P++  K +P D +LW+   P EP W SP+G GRPGWH+EC+A++   +G V
Sbjct: 215 ALFAERGGDPDRPGKSDPLDALLWRAERPEEPSWPSPFGPGRPGWHVECAAIAMTRIGNV 274

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DI GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++
Sbjct: 275 LDIQGGGSDLIFPHHEFSSAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQ 334

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           L       G       IRL +   HYR+   ++   L EA+  L +W   +   G  D  
Sbjct: 335 LRRDGVDPG------AIRLGLFAGHYRQDRYWSPAVLDEAQQRLHRWRSATALDGAPDAT 388

Query: 351 VLSA-----LYNDLNTVSAIQALHKLARE--STKNHD 380
            + A     L +DL+T  A+ A+   A +  S   HD
Sbjct: 389 DVVARVRRYLADDLDTPKALAAIDGWAEDTLSYGGHD 425


>gi|315443963|ref|YP_004076842.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315262266|gb|ADT99007.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 412

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 200/397 (50%), Gaps = 41/397 (10%)

Query: 4   KIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++++++ +R+I   + + P +   MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 18  QLRLFDSADRQI---RPVSPGATATMYVCGITPYDATHLGHAATYLTFDLVNRVWRDSGH 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPT 120
           +  V YV+NITD+DD + ERA +        D I    +  + T  F +D   L  + P 
Sbjct: 75  D--VHYVQNITDVDDPLFERAAR--------DGIGWRELGDRETDLFREDMAALRVVPPR 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMG 176
               AT  I ++I +++ ++  G AY  ++    ++ F   +   +G  S    D + M 
Sbjct: 125 DYVAATEAIAEVIEVVEKLLASGAAYVVDDAQYPDVYFHAGATVQFGYES--GYDRETML 182

Query: 177 TRV------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
                    P++  K +P D +LW+   P EP W SP+G GRPGWH+EC+A++   +G V
Sbjct: 183 ALFAERGGDPDRPGKSDPLDALLWRAERPEEPSWPSPFGPGRPGWHVECAAIAMTRIGNV 242

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DI GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++
Sbjct: 243 LDIQGGGSDLIFPHHEFSSAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQ 302

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           L       G       IRL +   HYR+   ++   L EA+  L +W   +   G  D  
Sbjct: 303 LRRDGVDPG------AIRLGLFAGHYRQDRYWSPAVLDEAQQRLHRWRSATALDGAPDAT 356

Query: 351 VLSA-----LYNDLNTVSAIQALHKLARE--STKNHD 380
            + A     L +DL+T  A+ A+   A +  S   HD
Sbjct: 357 DVVARVRRYLADDLDTPKALAAIDGWAEDTLSYGGHD 393


>gi|297195348|ref|ZP_06912746.1| cysteinyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152754|gb|EDY63189.2| cysteinyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 366

 Score =  198 bits (504), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/370 (33%), Positives = 194/370 (52%), Gaps = 34/370 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T    +     +DP  + R+YVCG T YD  H+G+A     FD++ R+  +  
Sbjct: 17  RDLRIHDTATDGLV---TLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERATRD------GHDWTELAERETALFREDMTALRMLPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKM 175
              A   IP ++ L++ +   G AYE   ++ F   S P++G  SR      R +  ++ 
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDVYFSVESDPHFGEVSRLDAEAMRLLSAERG 185

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G   PE+  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ 
Sbjct: 186 GD--PERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQ 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 244 GGGSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVALDGAKMSKSKGNLVFVSKLRRD 303

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
                   PA  IRLA+L  HYR   ++T   L EA   + +W      P   ++  +++
Sbjct: 304 GVD-----PA-AIRLALLSHHYRADWEWTDAVLREAVERVGRWRAAVSRPDGPSADALVE 357

Query: 349 PAVLSALYND 358
             + +AL +D
Sbjct: 358 -EIRAALADD 366


>gi|158316655|ref|YP_001509163.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|310947183|sp|A8LH67|MSHC_FRASN RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|158112060|gb|ABW14257.1| Cysteine--tRNA ligase [Frankia sp. EAN1pec]
          Length = 444

 Score =  198 bits (503), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 167/319 (52%), Gaps = 22/319 (6%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +R+Y CG T YD  H+G+A   + +D++ R+LR    E  V YV+N+TD+DD ++ERA 
Sbjct: 60  TVRLYACGITPYDATHLGHAFTYLTYDLVQRVLRDAGHE--VRYVQNVTDVDDPLLERAT 117

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           ++   I   D    +  +    F  D T L  L P H       +  ++ ++  ++  G 
Sbjct: 118 RD--GIDWRD----LARREIDLFRADMTALRILPPDHYVGVVEAVGLIVDMVSQLVERGA 171

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV------PEKYHKKNPADFILWKRST 198
           AY  + ++ F  ++ P++G  +   +D  +M          P +  KK+P D +LW+   
Sbjct: 172 AYSVDGDLYFSVAAAPDFGQVA--HLDPAQMLVSCAEHGGDPGRPGKKDPLDPLLWRAER 229

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           P EP W SP+G GRPGWH+ECSA++ HYLG   DI GGG DL FPHHE   A +  A+  
Sbjct: 230 PGEPSWPSPFGPGRPGWHVECSAIARHYLGATIDIQGGGSDLAFPHHECSAAHAEVANGA 289

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  ++H   ++L+G KMSKS GN   ++ LL       R      IRLA+L  H+  
Sbjct: 290 RPFARAYVHTALVSLDGHKMSKSRGNLEFVSRLL------ARGADPAAIRLALLQHHHTV 343

Query: 319 PIDFTVQRLTEAEILLSKW 337
             ++T   +  A   L +W
Sbjct: 344 EWEWTAAAMPAAAERLDRW 362


>gi|294628495|ref|ZP_06707055.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. e14]
 gi|292831828|gb|EFF90177.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. e14]
          Length = 409

 Score =  197 bits (502), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 184/343 (53%), Gaps = 27/343 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T    +       P  + R+YVCG T YD  H+G+A     FD++ R+  +  
Sbjct: 17  RDLRIHDTATGGLVTLT---PGPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA+++       D +++   + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAQRDD-----LDWVAL-AERETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKM 175
              A   IP ++ L++ +   G AYE + ++ F   S P++GS SR      R +  ++ 
Sbjct: 126 YIGAVEAIPGIVPLVERLRDLGAAYELDGDVYFSVESDPHFGSVSRLDAAAMRLLSAERG 185

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G   P++  KKNP D +LW  +   EP W+    G GRPGWHIEC A++  +LG  FD+ 
Sbjct: 186 GD--PDRPGKKNPLDPMLWMAAREGEPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQ 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L   
Sbjct: 244 GGGSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSRLRRD 303

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
                   PA  IRLA+L  HYR   ++T Q L +A   L +W
Sbjct: 304 GVD-----PA-AIRLALLAHHYRSDWEWTDQVLQDAVARLGRW 340


>gi|41407974|ref|NP_960810.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|61216571|sp|Q73YS9|MSHC_MYCPA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|41396328|gb|AAS04193.1| CysS2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 415

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 132/415 (31%), Positives = 207/415 (49%), Gaps = 39/415 (9%)

Query: 4   KIKIYNTLERKI--TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++Y+T +R++      A   S   MYVCG T YD  H+G+A   + FD++YR  ++  
Sbjct: 18  ELRLYDTSDRQVRPVAAGAGPGSAATMYVCGITPYDATHLGHAATYLAFDLIYR--QWLD 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+N+TD+DD ++ERA ++            +  +    F +D   L  LAP  
Sbjct: 76  LGHDVHYVQNVTDVDDPLLERAARDGVDW------RALAEREVSLFREDMAALRILAPRD 129

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYG---SFSRR---KIDE 172
              AT  I  ++ L++ ++  G AY  + E   I +   +   +G    + R    ++  
Sbjct: 130 YVGATEAIADVVELVEKMLASGAAYVVDGEFPDIYYRADATLQFGYESGYDRETMLRLFA 189

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   D
Sbjct: 190 ERGGD--PQRPGKTDALDALLWRAARPGEPSWPSPFGNGRPGWHVECAAIALSRIGSGLD 247

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++L 
Sbjct: 248 IQGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLR 307

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGI 346
                 GR      IRL +L  HYR    ++ Q L EA   L +W      P    +  +
Sbjct: 308 ------GRGVEPAAIRLGLLAGHYRGDRYWSDQVLDEATARLRRWRTATALPAGPDATDV 361

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK--NHD-LLPIFNASA--HILGIEV 396
           I   V   L +DLNT  A+ AL     ++     HD   P   ASA   +LG+ +
Sbjct: 362 I-ARVRQYLADDLNTPKALAALDGWTTDALDYGGHDTAAPRLVASAVDALLGVAL 415


>gi|302550316|ref|ZP_07302658.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces viridochromogenes DSM 40736]
 gi|302467934|gb|EFL31027.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces viridochromogenes DSM 40736]
          Length = 409

 Score =  197 bits (501), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/343 (34%), Positives = 185/343 (53%), Gaps = 27/343 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T    +     +DP  + R+YVCG T YD  H+G+A     FD++ R+  +  
Sbjct: 17  RDLRIHDTATGGLV---TLDPGPVARIYVCGITPYDATHLGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA+++          + +  + T  F +D T L  L P  
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAQRDGLDW------AALAEQETALFREDMTALRMLPPRQ 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQKM 175
              A   IP ++ L++ +   G AYE   ++ F   S P++G  S       R +  ++ 
Sbjct: 126 YIGAVEAIPGIVPLVERLRDLGAAYELEGDVYFSVESDPHFGKVSNLDAAAMRLLSAERG 185

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G   P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FDI 
Sbjct: 186 GD--PDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDIQ 243

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 244 GGGSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSKL--- 300

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
            ++ G   PA  IRLA+L  HYR   ++T Q L +A   L +W
Sbjct: 301 -RYDGVD-PA-AIRLALLAHHYRADWEWTDQVLQDAVDRLGRW 340


>gi|203284503|ref|YP_002222243.1| cysteinyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083946|gb|ACH93537.1| cysteinyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 485

 Score =  197 bits (500), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 154/499 (30%), Positives = 237/499 (47%), Gaps = 68/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  + ++E + +  S  ++Y CGPTVY++AHIGN R  I  D+L + L+ +  + 
Sbjct: 7   LKLYNTKTKCLSEVKNL--SETKIYACGPTVYNYAHIGNLRTYIFEDLLIKSLKLF--KY 62

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V Y  NITDI          +DK+++ A++   ++        I    T+ F  D  +L
Sbjct: 63  NVNYAMNITDIGHLTGDFDDGEDKVVKAAKERGLTV------CEIGKFFTKAFFDDCKKL 116

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
             L P     A+ +I  MI +++ +  +G  Y  N  + FD S   NYG  +   +++  
Sbjct: 117 NILHPDKVLVASEYILDMIEVVKVLEKNGFTYFVNGNVYFDISRFKNYGQMAGINLNDIN 176

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +   +RV     K+N +DF+LW  ++     E  W+SPWG G P WH+EC+ M+ +Y   
Sbjct: 177 ENSVSRVELDLSKRNKSDFVLWFTNSKFQNQEMKWDSPWGFGYPSWHLECATMNLNYFNS 236

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             +IH GG+D I  HH NEIA   C    +   +++IH  FL +E  KMSKSN +FITI 
Sbjct: 237 TLNIHLGGIDHIRVHHVNEIAIMECY-LGKNWCDMFIHGEFLIMENEKMSKSNNDFITIK 295

Query: 290 ELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEI----LLSKWPQTSTSK 344
            L E + F      +P+  R   L  HYR  + FT   L   ++    LLSK     +S 
Sbjct: 296 NL-EDEGF------SPLDFRYFCLTAHYRTQLKFTFHSLKACKVARENLLSKLTSCYSSL 348

Query: 345 GIIDPAVLSA--------------------LYNDLNTVSAIQALHKLARE----STKNHD 380
              D ++LS                     +  DLN    +  L  + R+    S     
Sbjct: 349 SQFDISLLSQDDENIEFILEHKYYDSFLERIAFDLNIPKVLALLWDIVRDNNLSSLAKLK 408

Query: 381 LLPIFNASAHI-LGIEVCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLES 437
           L   F+    + L  E+ +E     I I   +  L++ER +    K F  AD IR+   S
Sbjct: 409 LAFKFDEVLSLGLREEILREIDRSRIVIDDVMNSLIEERRLAKLKKDFKRADEIREYCRS 468

Query: 438 KGFILEDYKNPDNGQRMTR 456
           KGFIL D    + G ++ R
Sbjct: 469 KGFILID---TEEGTKVKR 484


>gi|239932256|ref|ZP_04689209.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291440619|ref|ZP_06580009.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343514|gb|EFE70470.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 409

 Score =  197 bits (500), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 117/318 (36%), Positives = 168/318 (52%), Gaps = 23/318 (7%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  HIG+A     FD++ R+  +   ++ V YV+N+TD+DD ++ERA ++
Sbjct: 39  RIYVCGITPYDATHIGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDDPLLERAERD 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                     + +  + T  F +D T L  L P H   A   IP ++ L++ +   G AY
Sbjct: 97  ------GLDWAALAEQETALFREDMTALRMLPPRHYTGAVEAIPGIVPLVERLRDLGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E   +I F   S P++G  S       R +  ++ G   P++  KKNP D +LW  +   
Sbjct: 151 ELEGDIYFSVESDPHFGQVSHLDAAAMRLLSAERGGD--PDRPGKKNPVDPMLWMAAREG 208

Query: 201 EPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG DLIFPHHE   + +       
Sbjct: 209 EPSWDGGSLGRGRPGWHIECVAIALEHLGMGFDVQGGGSDLIFPHHEMGASHAQVLTGEF 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L G KMSKS GN + ++ L           PA  IRLA+L  HYR  
Sbjct: 269 PMAKAYVHAGMVALHGEKMSKSKGNLVFVSRLRRDGVD-----PA-AIRLALLAHHYRAD 322

Query: 320 IDFTVQRLTEAEILLSKW 337
            ++T Q L +A   L  W
Sbjct: 323 WEWTDQVLQDAVTRLGHW 340


>gi|118472573|ref|YP_888468.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|308197104|sp|A0QZY0|MSHC_MYCS2 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|118173860|gb|ABK74756.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 412

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 194/383 (50%), Gaps = 41/383 (10%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++ +R++   + + P     MYVCG T YD  H+G+A   + FD+++RL  +    
Sbjct: 19  LRLFDSADRQV---RPVTPGPTATMYVCGITPYDATHLGHAATYLTFDLVHRL--WLDAG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAIS--IITSKNTQQFVKDTTRLACLAPTH 121
             V YV+N+TD+DD + ERA +        D I    +  + TQ F +D   L  L P  
Sbjct: 74  HTVQYVQNVTDVDDPLFERAER--------DGIDWRTLGDRETQLFREDMAALRVLPPHD 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
              AT+ I +++ +++ ++  G AY   +    ++ F   +   +G  S    D   M T
Sbjct: 126 YVAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRADATAQFGYES--GYDRDTMLT 183

Query: 178 RV------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                   P++  K +  D +LW+   P EP W SP+GRGRPGWH+ECSA++   +G   
Sbjct: 184 LFAERGGDPDRPGKSDQLDALLWRAERPGEPSWPSPFGRGRPGWHVECSAIALTRIGTGL 243

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + +++L
Sbjct: 244 DIQGGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQL 303

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKG 345
                   +      IRL +   HYRE   ++ + L EA   L++W      P+   +  
Sbjct: 304 R------AQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEAPDATD 357

Query: 346 IIDPAVLSALYNDLNTVSAIQAL 368
           +I   V   L +DL+T  A+ AL
Sbjct: 358 VI-ARVRQYLADDLDTPKALAAL 379


>gi|326332343|ref|ZP_08198622.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardioidaceae bacterium Broad-1]
 gi|325949832|gb|EGD41893.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardioidaceae bacterium Broad-1]
          Length = 410

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/351 (33%), Positives = 186/351 (52%), Gaps = 27/351 (7%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCG T YD  H+G+A   + FD+L+R   +      V Y +N+TD+DD ++ERA +  
Sbjct: 40  LYVCGITPYDATHMGHANTYVAFDLLHRA--WLNAGYEVGYTQNVTDVDDPLLERADK-- 95

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               +      +  + T+ F +D   L  + P H   A   IP ++ LI  +   G  Y+
Sbjct: 96  ----VGIEWEALAERETELFRQDMEALRVVPPQHYIGAVESIPLVLSLIGELEEAGAIYK 151

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTRV--PEKYHKKNPADFILWKRSTPMEPG 203
            + ++    +    +G  SR   +E  +  G R   PE+  KK+P D +LW+   P EP 
Sbjct: 152 VDEDVYASVAVDDAFGEESRMSREEMLELFGERGGDPERPGKKDPLDPLLWRAERPGEPA 211

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SP+G GRPGWHIEC+A++  +LG  F +  GG DL+FPHHE   + +  A +  + A 
Sbjct: 212 WPSPYGPGRPGWHIECTAIALEHLGAGFTVQAGGSDLVFPHHEMSGSHARSAGK--EFAE 269

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           I+ H G +  +G KMSKS GN + ++ L  ++           IRL +L  HYR+  ++T
Sbjct: 270 IYTHGGMVAYDGHKMSKSRGNLVFVSALRNSEI------DPMAIRLVLLGHHYRDDWEWT 323

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPA------VLSALYNDLNTVSAIQAL 368
             +L +A   +++W + + + G   PA      VL AL +DL+   A+QA+
Sbjct: 324 DAKLFDAVDQIAEW-RKAVALGRGAPAAPVVETVLGALADDLDAPRAVQAV 373


>gi|219109269|pdb|3C8Z|A Chain A, The 1.6 A Crystal Structure Of Mshc: The Rate Limiting
           Enzyme In The Mycothiol Biosynthetic Pathway
 gi|219109270|pdb|3C8Z|B Chain B, The 1.6 A Crystal Structure Of Mshc: The Rate Limiting
           Enzyme In The Mycothiol Biosynthetic Pathway
          Length = 414

 Score =  196 bits (499), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/383 (31%), Positives = 194/383 (50%), Gaps = 41/383 (10%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++ +R++   + + P     MYVCG T YD  H+G+A   + FD+++RL  +    
Sbjct: 21  LRLFDSADRQV---RPVTPGPTATMYVCGITPYDATHLGHAATYLTFDLVHRL--WLDAG 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAIS--IITSKNTQQFVKDTTRLACLAPTH 121
             V YV+N+TD+DD + ERA +        D I    +  + TQ F +D   L  L P  
Sbjct: 76  HTVQYVQNVTDVDDPLFERAER--------DGIDWRTLGDRETQLFREDMAALRVLPPHD 127

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
              AT+ I +++ +++ ++  G AY   +    ++ F   +   +G  S    D   M T
Sbjct: 128 YVAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRADATAQFGYES--GYDRDTMLT 185

Query: 178 RV------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                   P++  K +  D +LW+   P EP W SP+GRGRPGWH+ECSA++   +G   
Sbjct: 186 LFAERGGDPDRPGKSDQLDALLWRAERPGEPSWPSPFGRGRPGWHVECSAIALTRIGTGL 245

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + +++L
Sbjct: 246 DIQGGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQL 305

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKG 345
                   +      IRL +   HYRE   ++ + L EA   L++W      P+   +  
Sbjct: 306 R------AQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEAPDATD 359

Query: 346 IIDPAVLSALYNDLNTVSAIQAL 368
           +I   V   L +DL+T  A+ AL
Sbjct: 360 VI-ARVRQYLADDLDTPKALAAL 381


>gi|328869460|gb|EGG17838.1| cysteinyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 640

 Score =  196 bits (498), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/399 (34%), Positives = 192/399 (48%), Gaps = 69/399 (17%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           NI  Y CGPTVYD +H+G+AR  +  D++ R++  Y+    V +V  +TDIDDKII++++
Sbjct: 120 NISWYSCGPTVYDSSHLGHARTYVTIDIIQRIINDYFNYN-VIHVMGMTDIDDKIIKKSK 178

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +   S         +     Q+FV D   L    P    R T HI  +I  I  I  +G 
Sbjct: 179 ETGVSF------QELARVKEQEFVDDMASLHVRPPLLITRVTEHIDNIIDFIGKIKENGF 232

Query: 145 AYEAN----NEIIFDTSSIPN-YGSF--SRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
           AY+      N I+FDT  + + YG F  +   I +  +   V  K   ++  DF LWK +
Sbjct: 233 AYDVQSDNTNSILFDTKQMGDRYGKFVYNDNIISDDTLKINVDAK---RDARDFALWKGT 289

Query: 198 TPME---------PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
              +           WESP+G+GRPGWHIECS+M     G   DIH GG+DL FPHHENE
Sbjct: 290 YGNDYDKDGKGTIVSWESPFGKGRPGWHIECSSMIESVFGNKLDIHAGGIDLKFPHHENE 349

Query: 249 IAQSCCAD----------RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           IAQ C A+            ++  N +IH G LN++G KMSKS  NFITI E L+T    
Sbjct: 350 IAQ-CEANFSPTPNTETGEYDQWINYFIHIGHLNIQGLKMSKSLKNFITIREYLKTN--- 405

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF-------------------TVQRLTEAEILLSKWPQ 339
                A  +R   LM  Y + ID+                     QRL E   +  +  +
Sbjct: 406 ----TADSLRWICLMNRYYDKIDYNPNNDYSSLPNKFYGWFGLVEQRLKEPLDMNLERSK 461

Query: 340 TSTSKGIIDP------AVLSALYNDLNTVSAIQALHKLA 372
            + +K  ID        V  AL  D NT  AI+++  L 
Sbjct: 462 FTDAKQYIDAFNTTKNEVHQALSQDFNTAKAIRSMGNLV 500


>gi|108800119|ref|YP_640316.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869247|ref|YP_939199.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126435744|ref|YP_001071435.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|123070011|sp|Q1B774|MSHC_MYCSS RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947199|sp|A3Q1B7|MSHC_MYCSJ RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947200|sp|A1UHV1|MSHC_MYCSK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|108770538|gb|ABG09260.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695336|gb|ABL92409.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126235544|gb|ABN98944.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 415

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 125/387 (32%), Positives = 199/387 (51%), Gaps = 33/387 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y++ +R++    A D +   MYVCG T YD  H+G+A   + FD+++RL  +    
Sbjct: 18  QLRLYDSADRQVRPVSAGDTAT--MYVCGITPYDATHLGHAATYLAFDLVHRL--WLDAG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITD+DD + ERA ++   I   D    + ++  Q F +D   L  L P    
Sbjct: 74  HRVHYVQNITDVDDPLFERAARD--GIDWRD----LGAREIQLFREDMAALRVLPPHDYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            AT+ I ++I L++ ++  G AY  ++    ++ +   +   +G  S    D + M T  
Sbjct: 128 AATDAIAEVIELVEKMLASGAAYVVDDPEFPDVYYRADATVQFGYES--NYDHETMLTLF 185

Query: 180 ------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K +  D +LW+   P EP W SP+G GRPGWH+EC+A++   +G   DI
Sbjct: 186 AERGGDPDRAGKADELDALLWRAERPGEPSWPSPFGPGRPGWHVECAAIALSRIGTGLDI 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + ++ L  
Sbjct: 246 QGGGSDLIFPHHEFSAAHAESVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSRLRA 305

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVL 352
                        IRL +L  HYRE   ++   L++A+  L +W + TS   G     VL
Sbjct: 306 EGV------DPSAIRLGLLAGHYREDRFWSDDVLSDAQTRLQRWRRATSLPTGPDATDVL 359

Query: 353 SA----LYNDLNTVSAIQALHKLARES 375
           +     L +DL+T  A+ AL     E+
Sbjct: 360 ARVRTYLADDLDTPKALIALDAWCTEA 386


>gi|281346768|gb|EFB22352.1| hypothetical protein PANDA_014037 [Ailuropoda melanoleuca]
          Length = 468

 Score =  196 bits (498), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/289 (39%), Positives = 162/289 (56%), Gaps = 24/289 (8%)

Query: 48  IVFDVLYRLLRYYYGEKC-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
           + FD++ R+L   +G  C +  V  ITD+DDKII RA +      +N + + + +   + 
Sbjct: 3   VRFDIIRRILTRVFG--CNIIMVMGITDVDDKIIRRAAE------MNVSPASLANLYEED 54

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGS 164
           F +D   L  L PT   R T +IPQ+I  I+ II +GHAY  A   + FD  SI + YG 
Sbjct: 55  FKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAQGNVYFDLRSIGDKYGK 114

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
                +         P    K++ +DF LWK + P E  W SPWG+GRPGWHIECS +SS
Sbjct: 115 L----VGAVPSPVGEPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTISS 170

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSN 282
              G+  DIH GG DL FPHHENEIAQ     +  +  N ++H+G L+++G+  KMSKS 
Sbjct: 171 LVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCRQWGNYFLHSGHLHVKGKEEKMSKSL 230

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
            N+ITI + L+T       +P  V RL  + + YR  ID++   + EA+
Sbjct: 231 KNYITIKDFLKT-------FPPDVFRLFCMRSAYRSAIDYSDGTMLEAK 272


>gi|301060756|ref|ZP_07201571.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300445153|gb|EFK09103.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 770

 Score =  196 bits (497), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/471 (30%), Positives = 237/471 (50%), Gaps = 54/471 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +++YNT+ R+  +F  I  + + +Y CGPT+     +   R ++  D++ R + Y  
Sbjct: 303 KSGLRVYNTMTRRKEDFVPIKENQVTLYSCGPTLCQVVDLVQCRRLVFSDLITRYMVYRG 362

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++ N+TD+DD+ IE A++   S+         T      F+KD   L  +  T 
Sbjct: 363 YD--VNHIMNVTDLDDRTIEGAQRAGVSL------KEFTDMFYNSFMKDLDSLNIIRATQ 414

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR + H+  MI L Q ++  G+AYE    I FD S   +YG  S+  +++ ++G  V  
Sbjct: 415 YPRPSEHVDDMIELAQTLLEKGYAYEKLRSIYFDISRFKDYGKLSKIDLNKIRIGKTVDL 474

Query: 181 EKYHKKNPADFILWKRST--PMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++Y K+NP DF L KRST   ++ G  +++ WG  RPGWH+EC+A++   LG   DIH  
Sbjct: 475 DQYEKENPKDFTLLKRSTLNELKSGLFFKTKWGNIRPGWHLECAAIALKTLGPTHDIHTS 534

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+ L+FPHHEN IA S  A      AN W+HN  +   G   + S+   +T+ +LL T+ 
Sbjct: 535 GVSLVFPHHENAIAISKAATG-RPLANYWLHNEPVMFNGP--NPSDDVKLTLRDLL-TEG 590

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---ILLSKWPQ-----TSTSKG--- 345
           F GR      IR  +L  HYR+PI F+  +L         L K+ Q      STS+    
Sbjct: 591 FKGRE-----IRYWLLSRHYRKPIFFSHTKLAAVRNTIAHLDKFVQKIYFAKSTSEDPDL 645

Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNASA 389
                 +    ++A+ +D N  +A+ AL +  R            ++     L       
Sbjct: 646 DQTIYALKQGFVTAMDDDFNVAAALAALFQFTRNINLRMDQRGLSTSDREKTLAALTRIN 705

Query: 390 HILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            +LGI     +L+   S A + KL+++R +    K + +AD++RK++E+ G
Sbjct: 706 SVLGI----MNLDPPDSDAEVAKLIEKRELARSQKDWGTADHLRKEMEAMG 752


>gi|254775033|ref|ZP_05216549.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 384

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/391 (32%), Positives = 195/391 (49%), Gaps = 41/391 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD++YR  ++      V YV+N+TD+DD ++ERA +  
Sbjct: 13  MYVCGITPYDATHLGHAATYLAFDLIYR--QWLDLGHDVHYVQNVTDVDDPLLERAAR-- 68

Query: 88  PSIPINDAIS--IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 D I    +  +    F +D   L  LAP     AT  I  ++ L++ ++  G A
Sbjct: 69  ------DGIDWRALAEREVSLFREDMAALRILAPRDYVGATEAIADVVELVEKMLASGAA 122

Query: 146 YEANNE---IIFDTSSIPNYG---SFSRR---KIDEQKMGTRVPEKYHKKNPADFILWKR 196
           Y  + E   I +   +   +G    + R    ++  ++ G   P++  K +  D +LW+ 
Sbjct: 123 YVVDGEFPDIYYRADATLQFGYESGYDRETMLRLFAERGGD--PQRPGKTDALDALLWRA 180

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           + P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C  
Sbjct: 181 ARPGEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVR 240

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
              + A  ++H G +  +G KMSKS GN + +++L       GR      IRL +L  HY
Sbjct: 241 GERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLR------GRGVEPAAIRLGLLAGHY 294

Query: 317 REPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           R    ++ Q L EA   L +W      P    +  +I   V   L +DLNT  A+ AL  
Sbjct: 295 RGDRYWSDQVLDEATARLRRWRTATALPAGPDATDVI-ARVRQYLADDLNTPKALAALDG 353

Query: 371 LARESTK--NHD-LLPIFNASA--HILGIEV 396
              ++     HD   P   ASA   +LG+ +
Sbjct: 354 WTTDALDYGGHDTAAPRLVASAVDALLGVAL 384


>gi|15609267|ref|NP_216646.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|31793310|ref|NP_855803.1| cysteinyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638012|ref|YP_978236.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661945|ref|YP_001283468.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823340|ref|YP_001288094.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167967870|ref|ZP_02550147.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215403514|ref|ZP_03415695.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411843|ref|ZP_03420627.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427508|ref|ZP_03425427.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431057|ref|ZP_03428976.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215446356|ref|ZP_03433108.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218753852|ref|ZP_03532648.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558106|ref|ZP_03537182.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990506|ref|YP_002645193.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798807|ref|YP_003031808.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232288|ref|ZP_04925615.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis C]
 gi|254364936|ref|ZP_04980982.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551164|ref|ZP_05141611.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187126|ref|ZP_05764600.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260201240|ref|ZP_05768731.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205422|ref|ZP_05772913.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443634|ref|ZP_06433378.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Mycobacterium tuberculosis T46]
 gi|289447756|ref|ZP_06437500.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554084|ref|ZP_06443294.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           605]
 gi|289570243|ref|ZP_06450470.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T17]
 gi|289574811|ref|ZP_06455038.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis K85]
 gi|289745403|ref|ZP_06504781.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           02_1987]
 gi|289750724|ref|ZP_06510102.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T92]
 gi|289754239|ref|ZP_06513617.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289758250|ref|ZP_06517628.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T85]
 gi|289762291|ref|ZP_06521669.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis GM
           1503]
 gi|294993134|ref|ZP_06798825.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297634716|ref|ZP_06952496.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297731705|ref|ZP_06960823.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525625|ref|ZP_07013034.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306776378|ref|ZP_07414715.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu001]
 gi|306780156|ref|ZP_07418493.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu002]
 gi|306784900|ref|ZP_07423222.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu003]
 gi|306789267|ref|ZP_07427589.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu004]
 gi|306793596|ref|ZP_07431898.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu005]
 gi|306797986|ref|ZP_07436288.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu006]
 gi|306803865|ref|ZP_07440533.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu008]
 gi|306808437|ref|ZP_07445105.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu007]
 gi|306968261|ref|ZP_07480922.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu009]
 gi|306972490|ref|ZP_07485151.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080200|ref|ZP_07489370.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu011]
 gi|307084779|ref|ZP_07493892.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu012]
 gi|313659040|ref|ZP_07815920.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039653|sp|P67018|MSHC_MYCBO RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|54042274|sp|P67017|MSHC_MYCTU RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947194|sp|A1KKH3|MSHC_MYCBP RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947195|sp|C1AQ46|MSHC_MYCBT RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947201|sp|A5U4F6|MSHC_MYCTA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947202|sp|A5WPA3|MSHC_MYCTF RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947203|sp|C6DPT0|MSHC_MYCTK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|3261823|emb|CAB10724.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium
           tuberculosis H37Rv]
 gi|31618902|emb|CAD97007.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium bovis
           AF2122/97]
 gi|121493660|emb|CAL72135.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601347|gb|EAY60357.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis C]
 gi|134150450|gb|EBA42495.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506097|gb|ABQ73906.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721867|gb|ABR06492.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis F11]
 gi|224773619|dbj|BAH26425.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320310|gb|ACT24913.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           1435]
 gi|289416553|gb|EFD13793.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Mycobacterium tuberculosis T46]
 gi|289420714|gb|EFD17915.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289438716|gb|EFD21209.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           605]
 gi|289539242|gb|EFD43820.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis K85]
 gi|289543997|gb|EFD47645.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T17]
 gi|289685931|gb|EFD53419.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           02_1987]
 gi|289691311|gb|EFD58740.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T92]
 gi|289694826|gb|EFD62255.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289709797|gb|EFD73813.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis GM
           1503]
 gi|289713814|gb|EFD77826.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T85]
 gi|298495419|gb|EFI30713.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308215167|gb|EFO74566.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326927|gb|EFP15778.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu002]
 gi|308330361|gb|EFP19212.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu003]
 gi|308334196|gb|EFP23047.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337992|gb|EFP26843.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu005]
 gi|308341678|gb|EFP30529.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu006]
 gi|308345168|gb|EFP34019.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu007]
 gi|308349474|gb|EFP38325.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu008]
 gi|308354105|gb|EFP42956.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu009]
 gi|308358045|gb|EFP46896.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361985|gb|EFP50836.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu011]
 gi|308365646|gb|EFP54497.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu012]
 gi|323719283|gb|EGB28425.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903745|gb|EGE50678.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           W-148]
 gi|328458569|gb|AEB03992.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           4207]
          Length = 414

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 135/418 (32%), Positives = 209/418 (50%), Gaps = 46/418 (11%)

Query: 4   KIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++Y++ +R++   + + P S   MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 18  QLRLYDSADRQV---RPVAPGSKATMYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGH 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  + YV+NITDIDD + ERA ++   +   D    +       F +D   L  L P   
Sbjct: 75  E--LHYVQNITDIDDPLFERADRD--GVDWRD----LAQAEVALFCEDMAALRVLPPQDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE------IIFDTSSIPNYGSFSRRKID----- 171
             AT  I +M+ LI+ ++  G AY  + E      I F   +   +G  S    D     
Sbjct: 127 VGATEAIAEMVELIEKMLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRL 186

Query: 172 -EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
            E++ G   P +  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G  
Sbjct: 187 CEERGGD--PRRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSG 244

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DI GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ 
Sbjct: 245 LDIQGGGSDLIFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSA 304

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           L               +RL +L  HYR    ++ Q L EA   L +W +T+T+     PA
Sbjct: 305 LRAQDV------EPSAVRLGLLAGHYRADRFWSQQVLDEATARLHRW-RTATAL-PAGPA 356

Query: 351 VLSA-------LYNDLNTVSAIQALHKLARESTK--NHDL-LPIFNASA--HILGIEV 396
            +         L +DL+T  AI AL     ++ +   HD   P   A+A   +LG+++
Sbjct: 357 AVDVVARVRRYLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL 414


>gi|240047303|ref|YP_002960691.1| Cysteinyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984875|emb|CAT04868.1| Cysteinyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 401

 Score =  195 bits (496), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 173/321 (53%), Gaps = 23/321 (7%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  + ++YVCGPTVYDF HIGN RP+I FD L  +LRY+   K V ++ NITDIDDKII
Sbjct: 3   INKDSFKIYVCGPTVYDFIHIGNLRPIISFDFLISILRYF--NKKVDFLHNITDIDDKII 60

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
            RA  E      N + S I +     +++         P    + T+H+ ++I  I N+ 
Sbjct: 61  NRALAE------NKSESEIANFYYLHYLEMLKIYNVFPPNMIIKVTDHLDKIINYISNLE 114

Query: 141 LHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G  Y   + ++IF+T  I NYG     K+  Q +      K +K N  DF+LWK+ T 
Sbjct: 115 QAGFTYYNQDGDLIFNTKKIENYG-----KVSGQILSKLYKNKDNKANNNDFVLWKK-TK 168

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
               + S +G GRPGWH ECSAM   Y     DIHGGG DLIFPHHENE AQ    ++ +
Sbjct: 169 KGVVYNSSFGLGRPGWHTECSAMIFDYFNTQIDIHGGGNDLIFPHHENENAQHFALNKED 228

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
            T + W+  G +N+ G+KMSKS GN I        K F  +  P  V R  +L +    P
Sbjct: 229 ITKD-WLRVGVININGQKMSKSLGNVIL------AKDFYQKYHP-DVFRNILLTSSLSSP 280

Query: 320 IDFTVQRLTEAEILLSKWPQT 340
           I+ T + LT    L+  + ++
Sbjct: 281 INITSELLTNHSNLILSYKKS 301


>gi|255027861|ref|ZP_05299847.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 300

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 106/268 (39%), Positives = 147/268 (54%), Gaps = 32/268 (11%)

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
           MI +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     K++  DF
Sbjct: 1   MIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNERKQDELDF 60

Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
            LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPHHE+EIAQ
Sbjct: 61  TLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPHHEDEIAQ 120

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A   +  AN W+HN FLN++G KMSKS GNFIT++++L+            VIR  M
Sbjct: 121 SEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------DPNVIRFFM 172

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI--------------I 347
           L  HYR+PI      L +A+  L +            QT   + +              +
Sbjct: 173 LSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDEWLEQLTEL 232

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARES 375
             A    + +D NT +AI   H+LA+ +
Sbjct: 233 KQAFEDDMDDDFNTANAITTFHELAKRA 260


>gi|225021443|ref|ZP_03710635.1| hypothetical protein CORMATOL_01463 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945825|gb|EEG27034.1| hypothetical protein CORMATOL_01463 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 419

 Score =  195 bits (495), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 208/387 (53%), Gaps = 39/387 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T +  +   + +  +   MYVCG T YD  H+G+A   + FD+++RLL       
Sbjct: 19  LRLYDTADETLKPVR-VTHNQAGMYVCGITPYDSTHLGHAATYLAFDLIHRLL--IDAGV 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            VTYV+NITD+DD + ERA +        D +    + S     F  D   L+ + P   
Sbjct: 76  QVTYVQNITDVDDPLFERATR--------DGVDWRELGSSQIDLFRSDMADLSVIPPQDY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG---SFSRRKIDE--- 172
             A   + ++I ++Q ++  G AY  ++    +I    ++   +G   ++ R+++ E   
Sbjct: 128 VGAMESVGEVITMVQQLLDAGAAYVVDDPDYPDIYASITATDRFGYESNYPRQRMLELFA 187

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K++P D +LW+ +   EP W++P+G GRPGWH+ECSA++++ LG  F 
Sbjct: 188 ERGGD--PDRPGKRDPLDALLWRVAREGEPAWDAPFGAGRPGWHVECSAIATNRLGSSFA 245

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A +  A    + A  ++H G ++L+G KMSKS GN + +++L 
Sbjct: 246 IQGGGSDLIFPHHEFSAAHAEAALASPRMAEHYVHTGMISLDGVKMSKSLGNLVFVSKLT 305

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKG 345
           E             IRL + + HYR   D++ + L  AE  L  W   +T       ++ 
Sbjct: 306 EAGH------DPSAIRLGVYLGHYRSDRDWSDKVLWAAEHRLVYWRMATTLASDESAARA 359

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLA 372
           ++   + S L +DLNT +AI+A+ + A
Sbjct: 360 LVQ-QIRSLLADDLNTPAAIKAIDEWA 385


>gi|282864361|ref|ZP_06273417.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. ACTE]
 gi|282560848|gb|EFB66394.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. ACTE]
          Length = 409

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/391 (31%), Positives = 203/391 (51%), Gaps = 36/391 (9%)

Query: 3   KKIKIYNTLER-KITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + ++I++T    +IT    +DP  + R+YVCG T YD  H+G+A     FD++ R+  + 
Sbjct: 17  RDLRIHDTATGGRIT----LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WL 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             ++ V YV+N+TD+DD ++ERA ++       +  + +  + T  F +D T L  L P 
Sbjct: 71  DTKRQVHYVQNVTDVDDPLLERAVRD------GEDWAELAERETALFREDMTALRMLPPK 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQK 174
           H   A   IP ++ L++ ++  G AYE + ++ F   S P++G  S       R +  ++
Sbjct: 125 HYIGAVEAIPGIVPLVERLLDAGAAYELDGDVYFSVGSDPHFGGVSHLDAEAMRLLSAER 184

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDI 233
            G   PE+  KKNP D +LW  +   EP W+          WHIEC A++  +LG  FD+
Sbjct: 185 GGD--PERPGKKNPLDPMLWMAARDGEPSWDGGRLGRGRPGWHIECVAIALDHLGMGFDV 242

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL+FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 243 QGGGSDLVFPHHEMGASHAQALTGEYPFAQAYVHAGMVGLDGEKMSKSKGNLVFVSALRR 302

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGII 347
                    PA  IRL++L  HYR   ++T Q L +A   L++W      P    +  ++
Sbjct: 303 DGVD-----PA-AIRLSLLAHHYRSDWEWTDQVLADAVERLARWRAAVSRPDGLPADALV 356

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN 378
           D  V  AL +DL++ +A+ A+ + A   T  
Sbjct: 357 D-EVREALADDLDSPAALAAVDRWAERQTSG 386


>gi|83768602|dbj|BAE58739.1| unnamed protein product [Aspergillus oryzae]
          Length = 531

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/281 (39%), Positives = 161/281 (57%), Gaps = 21/281 (7%)

Query: 15  ITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           +T F A+DP    +  Y CGPTVYD AH+G+AR     D++ R+L+ Y+ +  V +V NI
Sbjct: 44  LTPFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKDYF-KFDVEFVMNI 102

Query: 73  TDIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           TD+DDK+         ++P  DA  I   +T K  + F++D   L  L P    R T + 
Sbjct: 103 TDVDDKL------RGSTVP-GDAYEIFTKLTKKYEEHFMRDMRDLNVLDPDEITRVTEYG 155

Query: 130 PQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
            ++   ++ I+ +   Y   +  + FD  S    G    R  +    GT +     K++P
Sbjct: 156 QEIADFVEKIVTNDFGYVTLDGSVYFDIKSFEKAGHPYARDGE----GT-LSHAVEKRSP 210

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            DF +WK S P EP W+S WG+GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE
Sbjct: 211 DDFAIWKASRPGEPSWKSQWGQGRPGWHIECSAMASSRLGSQNDIHSGGIDLAFPHHDNE 270

Query: 249 IAQSCC--ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           +AQS    +++ ++  N ++H G L+++G KMSKS  NF T
Sbjct: 271 LAQSEAYWSEKKQQWVNYFLHMGHLSIQGSKMSKSLKNFAT 311


>gi|198426695|ref|XP_002130035.1| PREDICTED: similar to cysteinyl-tRNA synthetase 2
           (mitochondrial)(putative) [Ciona intestinalis]
          Length = 523

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/493 (30%), Positives = 218/493 (44%), Gaps = 89/493 (18%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           DP ++  Y CGPTVYD  HIG+A   I FD + R+L  Y+G   ++ V  IT+IDDKII 
Sbjct: 50  DPKHVTWYACGPTVYDKTHIGHASSYIRFDTIRRILTNYFG-LTISMVMGITNIDDKIIT 108

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
           RA        +N     +      +F  D   L  L P    R +  +P+++  I  ++ 
Sbjct: 109 RANL------LNKEFLSMAEHYENEFKTDLLNLNILPPIAYVRVSEIVPELLSFIYRLLE 162

Query: 142 HGHAY-EANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
             HAY      + FD       G      ++  E   G        K+   DF LWK + 
Sbjct: 163 QRHAYVSKQGNVWFDVDQFTKVGKLVPIHQEWKESDSGGE------KRCARDFALWKAAK 216

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           P EP WE+PWG+GRPGWH+ECS ++S Y GK  DIH G  DL FPHHE+EI QS      
Sbjct: 217 PGEPYWEAPWGKGRPGWHLECSTIASLYFGKQIDIHSGASDLEFPHHESEILQSEAFHCE 276

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E+ AN ++H+G L     KMSKS GN + ++E L+      R  P  V+R   L T +  
Sbjct: 277 EQWANYFLHSGLLKFGKSKMSKSLGNVVNVDEALK------RHSP-DVLRYLCLSTAWHT 329

Query: 319 PIDFTVQRL--TEAEILLSK--------WPQTSTSKGIIDPA------------VLSALY 356
            + +T + +   +A I L K        + Q +      D A            V   + 
Sbjct: 330 NLSYTSKDIKHVKASIQLLKTFLSKCQQYVQGNIETKNFDSAAIYHSLDTCKSEVYVCMC 389

Query: 357 NDLNTVSAIQALHKLARESTK--------------NH--DLLPIFNASAHI------LGI 394
           ND +T   ++AL +L     K              NH  +  P      ++      LG 
Sbjct: 390 NDFDTPGVLRALKQLCYSVEKTFGEQIVVENWEPGNHVRNTKPFVEVMTYVTETFTNLGF 449

Query: 395 E-VCKEHLNKNISIA-------IEKLVQERLIL--------------LKMKKFSSADYIR 432
           + +   H + N  I        +E+L++ R  +              LK   F   DY+R
Sbjct: 450 QSISAAHTDSNPDITAKGQDDILEELLKFRAKVRKLAMSSNKTSDDGLKQLLFKECDYLR 509

Query: 433 KQLESKGFILEDY 445
            +L +KG  ++D+
Sbjct: 510 NELSNKGISIKDW 522


>gi|218781656|ref|YP_002432974.1| cysteine synthase [Desulfatibacillum alkenivorans AK-01]
 gi|218763040|gb|ACL05506.1| cysteine synthase [Desulfatibacillum alkenivorans AK-01]
          Length = 756

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 142/478 (29%), Positives = 226/478 (47%), Gaps = 55/478 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +YNT  R    F  I P    MY CGPT  +   +G+ R  +  D+L R L Y  
Sbjct: 299 KSGLSLYNTAIRSKESFTPIKPGKAGMYSCGPTANEPMGLGHCRRFVFADLLSRYLTYKG 358

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++ NITD+DDK IE +++          +   T K   QF++D   L       
Sbjct: 359 LD--VKHIINITDMDDKTIEGSQE------AGMGLEEFTQKYIDQFMEDIETLGVKPAEA 410

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PRA+ H+  M+ +   +   G AYE    + FD S +  YG  S   +D+ ++G  V  
Sbjct: 411 YPRASKHVDDMVEIASKLAGTGFAYEKMRSLYFDISRLEGYGDLSGIDLDKIRLGATVEL 470

Query: 181 EKYHKKNPADFILWKRS--TPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           + Y K NP DF L+KRS    ++ G   ++ WG  RP WHI+C+AMS  YLG+ +DIH  
Sbjct: 471 DDYEKDNPRDFTLFKRSRLNELKRGIFVKTEWGNVRPSWHIQCTAMSMKYLGETYDIHTA 530

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
             DL+FPHHENE+A +  A   +  AN W+H   + ++ +         IT+ + L+ K 
Sbjct: 531 SRDLVFPHHENEVAIA-KALTGKPLANYWLHCDQVIVDEKDAWPEK---ITLQD-LKDKG 585

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
           + GR      IR  +L THYR+P+  T+  L  A   L +               T+  +
Sbjct: 586 YTGRQ-----IRFWLLATHYRKPLHLTLASLDSAAKGLERLDHFVEALQNADGARTNADV 640

Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASA 389
                 I    ++A+ +DL+  +A+ +L  + ++           S+  + +L     + 
Sbjct: 641 DQLLYDIKQGFIAAMDDDLSVSAALSSLFAVVKKVNRLASQNALGSSGANKILEALRKTD 700

Query: 390 HILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +LG+     E  +  IS  +EK  + R        +++AD IR QL ++G  + D K
Sbjct: 701 QVLGVLSFDAEPQDAEISALMEKREKAR----AEGDYAAADAIRDQLTARGVTVRDGK 754


>gi|305681204|ref|ZP_07404011.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659409|gb|EFM48909.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 419

 Score =  194 bits (494), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/387 (31%), Positives = 208/387 (53%), Gaps = 39/387 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T +  +   + +  +   MYVCG T YD  H+G+A   + FD+++RLL       
Sbjct: 19  LRLYDTADETLKPVR-VTHNQAGMYVCGITPYDSTHLGHAATYLAFDLIHRLL--IDAGV 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            VTYV+NITD+DD + ERA +        D +    + S     F  D   L+ + P   
Sbjct: 76  QVTYVQNITDVDDPLFERATR--------DGVDWRELGSSQIDLFRSDMADLSVIPPHDY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG---SFSRRKIDE--- 172
             A   + ++I ++Q ++  G AY  ++    +I    ++   +G   ++ R+++ E   
Sbjct: 128 VGAMESVGEVITMVQQLLDAGAAYVVDDPDYPDIYASITATDRFGYESNYPRQRMLELFA 187

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K++P D +LW+ +   EP W++P+G GRPGWH+ECSA++++ LG  F 
Sbjct: 188 ERGGD--PDRPGKRDPLDALLWRAAREGEPAWDAPFGAGRPGWHVECSAIATNRLGSSFA 245

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A +  A    + A  ++H G ++L+G KMSKS GN + +++L 
Sbjct: 246 IQGGGSDLIFPHHEFSAAHAEAALASPRMAEHYVHTGMISLDGVKMSKSLGNLVFVSKLT 305

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKG 345
           E             IRL + + HYR   D++ + L  AE  L  W   +T       ++ 
Sbjct: 306 EAGH------DPSAIRLGVYLGHYRSDRDWSDKVLWAAEHRLVYWRMATTLASDESAARA 359

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLA 372
           ++   + S L +DLNT +AI+A+ + A
Sbjct: 360 LVQ-QIRSLLADDLNTPAAIKAIDEWA 385


>gi|167465001|ref|ZP_02330090.1| cysteinyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 317

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/331 (37%), Positives = 169/331 (51%), Gaps = 47/331 (14%)

Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
           +YG  S + +DE + G R+     K+NP DF+LWK + P E  W SPWG GRPGWHIECS
Sbjct: 3   DYGKLSHQNLDELQYGIRIEVDERKENPQDFVLWKAAKPGEVYWSSPWGNGRPGWHIECS 62

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           A+   YLG+  DIHGGG+DL FPHHE EIAQ+  A   +  A  W+HN FLN++  KMSK
Sbjct: 63  ALVHKYLGETIDIHGGGVDLTFPHHECEIAQT-EALTCKPMAKYWLHNAFLNIDNEKMSK 121

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S GN + + E+L+  K         V+RL M+M HYR  I+F    L +A   L +   +
Sbjct: 122 SLGNGVLVREILKRVK-------PQVLRLFMMMAHYRNQINFNSDGLEQAANGLERIMNS 174

Query: 341 STS---------KGIIDPAVL-----------SALYNDLNTVSAIQALHKLARESTKN-- 378
            T+         +G  D  V            + + +D NT  AI A+ +L  E+     
Sbjct: 175 VTNLKHRLKIAQEGPADEQVKNRIQAIKAQFEAKMNDDFNTPDAITAVFELVSEANNTLK 234

Query: 379 ---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
                      LL  F +   +LGI   +E     +   IEKL+ ER    + K ++ AD
Sbjct: 235 EERVNVSTLEMLLDQFKSFDTVLGILEPEE--TDLMDEEIEKLIAERTEARRAKNWARAD 292

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR  L  KG +LED        +  RW+QK
Sbjct: 293 EIRDILTEKGILLEDTP------QGIRWRQK 317


>gi|317124881|ref|YP_004098993.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588969|gb|ADU48266.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 418

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 136/404 (33%), Positives = 204/404 (50%), Gaps = 46/404 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++ +T+  ++    A+D S   +YVCG T YD  H+G+A   + FD+L R LR     
Sbjct: 18  EVRVRDTVSGELVP-AAVDGS-ASVYVCGITPYDATHLGHAATYLTFDLLVRSLRD--AG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITDIDD ++ERA  E   +   D    + ++    F +D T LA L P    
Sbjct: 74  VSVRYVQNITDIDDPLLERA--ERDGVSWED----LATREIGLFREDMTALAVLPPDEYL 127

Query: 124 RATNHIPQMIYLIQNIILHGHAY---------EANNEIIFDTSSIPNYGSFSRRKIDEQK 174
            A   IP  I  I+ ++  G AY            +++ FD S  P +GS SR  +DE  
Sbjct: 128 GAVESIPTFIAPIEQLLATGDAYLVPAPDASRPGAHDVYFDISRDPKFGSVSR--LDEAG 185

Query: 175 M------GTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYL 227
           M          P++  K+N  D +LW+     EP W+    G GRPGWHIEC+ ++  +L
Sbjct: 186 MLEVFAERGGDPDREGKRNRLDALLWRAHRAGEPEWDGGQLGPGRPGWHIECACIACTHL 245

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   D+ GGG DL+FPHHE   A +         A  ++H G + L+G KMSKS GN + 
Sbjct: 246 GLPIDVQGGGTDLVFPHHEMSAAHARAFSGRPAFARTYVHQGMVGLDGEKMSKSKGNLVF 305

Query: 288 INELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           ++EL        R+   P+ IRLA+L  H+     +    LT AE  L+ W +  +  G 
Sbjct: 306 VSELR-------RAGVDPMAIRLALLARHHAADWIWQDHDLTAAEERLATWRRALSGNG- 357

Query: 347 IDPA-------VLSALYNDLNTVSAIQALHKLARES-TKNHDLL 382
             PA       V +AL +DL++  A+ ++ + A E+ T+  D L
Sbjct: 358 -GPAADGTVEEVRAALADDLDSPRALASVDRWAAEALTRGGDDL 400


>gi|42561475|ref|NP_975926.1| cysteinyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|61216209|sp|Q6MS23|SYC_MYCMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|42492974|emb|CAE77568.1| cysteine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321346|gb|ADK69989.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 441

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 140/443 (31%), Positives = 215/443 (48%), Gaps = 47/443 (10%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y CGPTVY++ HIGNARP+++ DVL R L+    +  V Y++NITDIDDKII +A +
Sbjct: 19  INLYCCGPTVYNYIHIGNARPILLVDVLIRYLKSRSIK--VNYLQNITDIDDKIILKALE 76

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
            +    +N+    ++ K T  +++D   L    P      +  + +MI  I+N++    A
Sbjct: 77  NN----LNEL--EVSQKYTSAYLEDLKSLNINQPDKIILISQKMNEMIDFIKNLVDINAA 130

Query: 146 YEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           Y  + ++ FD     N Y   S  K+DE   G RV     K    DF LWK+ T +   W
Sbjct: 131 YVLDGDVYFDIKKYENEYCKLSGYKLDELISGKRVEIDSKKHYSLDFSLWKK-TDIGIKW 189

Query: 205 ESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           +S +G GRPGWH EC  +   Y   +  DIH GG+DL FPHHENE  Q    +  E  A+
Sbjct: 190 DSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKFPHHENERIQFIAKNNKE-LAH 248

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           IW+HNG L +   KMSKS GN I + + +       +      +R   L T+Y +P++ +
Sbjct: 249 IWLHNGHLQINDEKMSKSLGNVILVRDFI-------KKHNKNTLRWIFLTTNYTQPLNIS 301

Query: 324 VQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSALY---------NDLNTVSAIQA 367
              + +A     K    S         K +   ++ S+ Y         +DLNT   +  
Sbjct: 302 DDLIYQANKFFEKLTNLSKKTIQFIIKKDLKIKSINSSEYINKFNEYMEDDLNTSLVLSL 361

Query: 368 LHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI 418
           +  L ++  KN         + L+   N    +LG +      N       ++L  +   
Sbjct: 362 IDLLIKQINKNIVDKNLDNFNLLIGSLNYILDVLGFDNV---FNYKFDNKTKELFLKWQE 418

Query: 419 LLKMKKFSSADYIRKQLESKGFI 441
           L+K K+F+ AD IR +L  +G +
Sbjct: 419 LVKNKEFNKADLIRNKLIEQGIL 441


>gi|118465539|ref|YP_881564.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
 gi|310947192|sp|A0QF76|MSHC_MYCA1 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|118166826|gb|ABK67723.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 384

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/358 (33%), Positives = 182/358 (50%), Gaps = 36/358 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD++YR  ++      V YV+N+TD+DD ++ERA +  
Sbjct: 13  MYVCGITPYDATHLGHAATYLAFDLIYR--QWLDLGHDVHYVQNVTDVDDPLLERAAR-- 68

Query: 88  PSIPINDAIS--IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 D I    +  +    F +D   L  LAP     AT  I  ++ L++ ++  G A
Sbjct: 69  ------DGIDWRALAEREVSLFREDMAALRILAPRDYVGATEAIADVVELVEKMLASGAA 122

Query: 146 YEANNE---IIFDTSSIPNYG---SFSRR---KIDEQKMGTRVPEKYHKKNPADFILWKR 196
           Y  + E   I +   +   +G    + R    ++  ++ G   P++  K +  D +LW+ 
Sbjct: 123 YVVDGEFPDIYYRADATLQFGYESGYDRETMLRLFAERGGD--PQRPGKTDALDALLWRA 180

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           + P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C  
Sbjct: 181 ARPGEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVR 240

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
              + A  ++H G +  +G KMSKS GN + +++L       GR      IRL +L  H+
Sbjct: 241 GERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLR------GRGVEPAAIRLGLLAGHF 294

Query: 317 REPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
           R    ++ Q L EA   L +W      P    +  +I   V   L +DLNT  A+ AL
Sbjct: 295 RGDRYWSDQVLDEATARLRRWRTATALPAGPDATDVI-ARVRQYLADDLNTPKALAAL 351


>gi|302867391|ref|YP_003836028.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micromonospora aurantiaca ATCC 27029]
 gi|302570250|gb|ADL46452.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micromonospora aurantiaca ATCC 27029]
          Length = 412

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/366 (33%), Positives = 189/366 (51%), Gaps = 32/366 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A  MI FD++ R+ R    +  V YV+N+TDIDD ++ERA ++ 
Sbjct: 40  MYVCGITPYDATHLGHAATMITFDLVQRMWRDAGLD--VRYVQNVTDIDDPLLERAERD- 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 +   ++  + T  F +D   L  + P H   A   IP +   +  ++  G AY 
Sbjct: 97  -----GEDWKVLAMRETALFREDMEALRMIPPAHYVGAVESIPDIAEKVLMLLKDGAAYR 151

Query: 147 --EANNEIIFDTSSIPNYG---SFSRRKIDE---QKMGTRVPEKYHKKNPADFILWKRST 198
             +   ++ FD S+ P +G   + +R ++ E   ++ G   PE+  K++P D +LW+ + 
Sbjct: 152 LDDGTGDVYFDISAAPRFGYESNLTREQMIELFAERGGD--PERAGKRDPLDPLLWRGAR 209

Query: 199 PMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W     G GRPGWHIEC+ ++ + LG   D+ GGG DLIFPHHE   A +     
Sbjct: 210 EGEPSWPGGDLGPGRPGWHIECTVIALNLLGDRIDVQGGGNDLIFPHHECSAAHAERLTG 269

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A+ ++H G + L+G KMSKS GN + ++ L   K           +RLA++  HYR
Sbjct: 270 EAPFADHYVHAGMIGLDGEKMSKSQGNLVFVSRLRADKV------DPMAVRLALMSGHYR 323

Query: 318 EPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
               +T   LTEA+  L +W +        S   +  AV   L +DL+T  A+ A  + A
Sbjct: 324 SDRSWTDDLLTEAQERLGRWRRAAAAPAGPSGAALLAAVRERLADDLDTPGALAAADRWA 383

Query: 373 RESTKN 378
            E T N
Sbjct: 384 -EGTLN 388


>gi|224369114|ref|YP_002603278.1| CysS1 [Desulfobacterium autotrophicum HRM2]
 gi|223691831|gb|ACN15114.1| CysS1 [Desulfobacterium autotrophicum HRM2]
          Length = 668

 Score =  194 bits (493), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 229/472 (48%), Gaps = 51/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ NTL +K   F+     +I +Y CGPTV+   H+G AR  +  D+L R L +  G K
Sbjct: 213 LKVLNTLTQKKELFKPNKSESIGIYSCGPTVHGRIHLGEARRFVFSDLLCRYLEFS-GYK 271

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDKIIE + + H  +       + T +N  QF KD   L     T  P 
Sbjct: 272 -VNHVMNITDLDDKIIEASEKAHMDM------DLFTEENIIQFKKDLDLLGIRDATKYPL 324

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           A+ H+ +MI L   II +G  YE    + FD S +P+YG  S   +D+  +GT V  + Y
Sbjct: 325 ASLHVEEMISLADKIIENGFGYEKLRSVYFDVSKLPSYGRLSGVDLDKMNLGTTVDLDDY 384

Query: 184 HKKNPADFILWKRS--TPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K++P DF L KR     ++ G  + + WG  RP WHI+C AM+  YL + FDIH     
Sbjct: 385 EKEDPRDFTLLKRVKLNELKKGIYYSTKWGNVRPSWHIQCPAMAMKYLSENFDIHTSARH 444

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIA +      +  AN W+H G +  E +++ +    F+T+  +L+   F  
Sbjct: 445 LIFPHHENEIAIAEAVTG-KLLANYWMHCGPVMFEDKEVDEKK-RFLTVEFVLKM-GFSE 501

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRL-------------TEAEILLSKWPQTSTSKGI 346
           R      +R  +L ++Y+  + F+ +RL              +A + +      S  + +
Sbjct: 502 RE-----LRYWLLSSNYQRSLPFSRERLLAKRKSLKRVDDFIQALLNVENADNDSVVEDL 556

Query: 347 IDPAV---LSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNASAHIL 392
               +     A+ +DLN   A+ ++ K  R   K ++L+            I NA   I 
Sbjct: 557 AQDTIDEFTKAMDDDLNISVALASIFKTVR---KGNNLIQKMEMTAQAAENIINAFKKID 613

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +          +    + L+  R  L K K + +AD IR +LE++G  + D
Sbjct: 614 AVLNVFSFDPPFLEQDTQVLMDRRNALRKGKDWEAADQIRVELENRGIEIND 665


>gi|308160745|gb|EFO63218.1| Cysteinyl-tRNA synthetase [Giardia lamblia P15]
          Length = 645

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 134/436 (30%), Positives = 205/436 (47%), Gaps = 56/436 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I N+L  ++ E +   PS +  Y+CGPTVYD  H+G+AR  + FDV+ R+   Y+G + V
Sbjct: 10  ITNSLTGRLEELRTRAPSTVLAYICGPTVYDSTHLGHARTYVTFDVIRRIFEDYFGLR-V 68

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y  NITD+DDKII RA +   S      I  +  K  Q+F  D   L+    T   R T
Sbjct: 69  HYQCNITDVDDKIIARAVERGSS------IFDVCRKYEQEFFSDMRTLSVRPFTVVTRVT 122

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-------DEQKM---- 175
            ++  +I  IQ I+ +G AY +   + FD     N G +S  K+       DE ++    
Sbjct: 123 EYMADIILFIQKIMDNGFAYVSAGSVYFDVVVARNAG-YSYPKLRPLGSSSDELQLLIQN 181

Query: 176 ------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR------------GRPGWHI 217
                   RV EK    + A +  WK + P +  W++ + R            GRPGWHI
Sbjct: 182 ADGVDSKNRVSEKRSSSDFALWKAWKETEPEDAKWDATFSRKNGAVSELITLPGRPGWHI 241

Query: 218 ECSAMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           ECSAM++  LGK     FD+H GG DL FPHH+NE+ Q     + +     ++H+G L +
Sbjct: 242 ECSAMAAAALGKNTEGAFDLHLGGCDLQFPHHDNELIQLETWAKKKNMIGCFLHSGHLKI 301

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--- 330
            G  MSKS  NF T+ E+L         + A  +R+   M  Y   +D+++  +  A   
Sbjct: 302 AGDVMSKSKKNFKTVREVLNI-------FTANQVRMLFCMVPYSASLDYSISMMDAAVAK 354

Query: 331 ----EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
                  LS   Q    +  +   + +  YN +      Q +  L+       + + I +
Sbjct: 355 DKKITSFLSNCRQIIQHEEELSEPIKNLRYNTMEETLEAQTIEFLSNVDIAFRNDISIVS 414

Query: 387 ASAHILG-IEVCKEHL 401
           A  HI+  I+ CK ++
Sbjct: 415 AMNHIMSLIDNCKAYI 430


>gi|117928653|ref|YP_873204.1| cysteine--tRNA ligase [Acidothermus cellulolyticus 11B]
 gi|117649116|gb|ABK53218.1| Cysteine--tRNA ligase [Acidothermus cellulolyticus 11B]
          Length = 373

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/349 (34%), Positives = 174/349 (49%), Gaps = 24/349 (6%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
             +RMYVCG T YD  H+G+A   I  DVL RLLR    +  V   RN+TD+DD +++ A
Sbjct: 23  GKVRMYVCGVTPYDVTHLGHAATYIWVDVLTRLLRQLGTD--VEVCRNVTDVDDVLLDAA 80

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           R+   S    DA + +   + +Q   D   L    PTH+PRA N +  ++ L   ++  G
Sbjct: 81  RRAGASY---DAFAAVQQFHFEQ---DMAALGVRPPTHEPRAHNFVRNVVSLAAGLVDAG 134

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PEKYHKKNPADFILWKRSTP 199
            AY  N  + F  + +P     S    DE +         P+   K+NP D  +W+ S  
Sbjct: 135 KAYVRNGSVYFRGADVPVRAGLS---ADEARQLAAEFNDEPDDPAKENPFDVAIWRASGE 191

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
             P W SPWG GRPGWH EC+AM+    G   DIH GG DL FPHH  E A +     + 
Sbjct: 192 GVPAWPSPWGPGRPGWHAECAAMAMTVFGPALDIHAGGADLRFPHHAYEAALAEALTGVR 251

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  W+  G ++  GRKM+KS GN + +++LL           A  +R+ ++   + +P
Sbjct: 252 PFARTWLRVGMVHHGGRKMAKSAGNLVLVSDLLAAHP-------AAALRMYVVHRRWPQP 304

Query: 320 IDFTVQRLTEAEILLSKWPQTSTSKGIID--PAVLSALYNDLNTVSAIQ 366
            +F  + L  AE  +      +   G  D   AVL+AL +DL+  +A Q
Sbjct: 305 WEFDARELQRAEADVDALFTAAARPGRSDGREAVLAALRDDLDVPTAFQ 353


>gi|302546650|ref|ZP_07298992.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464268|gb|EFL27361.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 373

 Score =  194 bits (492), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/312 (37%), Positives = 165/312 (52%), Gaps = 23/312 (7%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TDIDD ++ERA   
Sbjct: 39  RIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDIDDPLLERA--- 93

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +   D  + +  + T  F +D T L  L P H   A   IP ++ L++ +   G AY
Sbjct: 94  ---VANGDDWTALAERETALFREDMTALRMLPPRHYIGAVESIPGIVPLVERLRDAGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E   +I F   S P +GS SR      R +  ++ G   PE+  KKNP D +LW  +   
Sbjct: 151 EVEGDIYFSVESDPAFGSVSRLDAEAMRLLSAERGGD--PERPGKKNPLDPMLWVAAREG 208

Query: 201 EPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+    G GRPGWHIEC A++  +LG  FD+ GGG DL FPHHE   + +       
Sbjct: 209 EPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQGGGSDLAFPHHEMGASHAQVLTGER 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L G KMSKS GN + ++ L           PA  IRLA+L  HYR  
Sbjct: 269 PFAQSYVHAGMVGLNGEKMSKSKGNLVFVSALRRDGVD-----PA-AIRLALLAHHYRSD 322

Query: 320 IDFTVQRLTEAE 331
            ++T   L +AE
Sbjct: 323 WEWTDGVLRDAE 334


>gi|169629202|ref|YP_001702851.1| cysteinyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|310947193|sp|B1MPE6|MSHC_MYCA9 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|169241169|emb|CAM62197.1| Cysteinyl-tRNA synthetase (CysS) [Mycobacterium abscessus]
          Length = 412

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/415 (31%), Positives = 206/415 (49%), Gaps = 42/415 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+T +R++       P+   MYVCG T YD  H+G+A   + FD++YR  ++    
Sbjct: 18  QLRLYDTADRQVRPVT-TGPTAT-MYVCGITPYDATHLGHAATYLTFDLIYR--QWLDAG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTH 121
             V YV+N+TDIDD + ERA +        D I    +  + T+ F  D T L  L P  
Sbjct: 74  LDVHYVQNVTDIDDPLFERADR--------DGIDWRELGDRETELFRGDMTALRVLPPRE 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKID------ 171
             RAT  I  +I L++ ++  G AY  ++    ++ F   +   +G  S   I+      
Sbjct: 126 YVRATESIACIIELVEKMLASGAAYVVDDPEYPDVYFRVDATEQFGYESGYDIETMSRLF 185

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            ++ G   P +  K N  D +LW+ + P EP WE+ +G GRPGWH+ECSA+    LG   
Sbjct: 186 AERGGD--PGRPGKANELDALLWRAARPGEPSWEASFGPGRPGWHVECSAIVLRELGAGI 243

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + ++ L
Sbjct: 244 DIQGGGSDLIFPHHEYSAAHAEAVTAQRRFARHYVHAGMIGWDGHKMSKSRGNLVKVSGL 303

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGI 346
                      PA  +RL +L  HYR    ++   L +A+  L++W        + S   
Sbjct: 304 TAQGVD-----PA-AVRLGLLAGHYRADRSWSDAVLADAQGRLARWRHAVALSAAPSARD 357

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
           +   V   L +DL+T +A+ AL     ++     HD      + +A   +LG+++
Sbjct: 358 VVARVRRYLADDLDTPNALAALDNWVTDALAYGGHDAAAGAQVRDAVDALLGVQL 412


>gi|47458983|ref|YP_015845.1| cysteinyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|61216201|sp|Q6KIE2|SYC_MYCMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|47458311|gb|AAT27634.1| cysteinyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 413

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 173/322 (53%), Gaps = 21/322 (6%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCGPTVY+  HIGN +P++ FD+  R   +   EK   ++ N+TDIDDKIIE+A +E+
Sbjct: 4   IYVCGPTVYNKVHIGNMKPIMTFDLFLRGANFI--EKQYLFLHNLTDIDDKIIEKASKEN 61

Query: 88  PS-IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
            + + I++  S         ++K         P +  + T++I  +I  I  ++  G  Y
Sbjct: 62  KTELEISELYSDF-------YLKMLDEYNINKPDYIEKVTDNINMIIEYIGLLVKKGSGY 114

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
                + FDT+  P YGS S   +++   G     K  K NP DF+LWK+ T +   W+S
Sbjct: 115 IKKGSVYFDTTKYPEYGSISNLNLNKTLDGDD-DFKNEKNNPHDFVLWKK-TKVGITWKS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           PW  GRPGWH ECSA+ +H   K   DIHGGG+DLIFPH+ENE  Q+     +   A  W
Sbjct: 173 PWSEGRPGWHTECSALINHIFKKDQIDIHGGGIDLIFPHNENENIQNIALHGLS-LAKKW 231

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G +  E  KMSKS  NFI  ++ +E  K+G  ++     R  +L T +  PI    +
Sbjct: 232 LHVGHIKWENEKMSKSLNNFILADDFIE--KYGNDTF-----RTLILNTSFSTPISINEE 284

Query: 326 RLTEAEILLSKWPQTSTSKGII 347
            L   + + +K+  T     ++
Sbjct: 285 ILESNKKISNKYQVTFNQANLL 306


>gi|304373037|ref|YP_003856246.1| Cysteinyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309228|gb|ADM21708.1| Cysteinyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|330723349|gb|AEC45719.1| cysteinyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 400

 Score =  193 bits (491), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 142/421 (33%), Positives = 207/421 (49%), Gaps = 41/421 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCGPTVYD+ HIGN RP++  D+L R+ +Y+  E  + ++ NIT+IDDKII++A  E 
Sbjct: 7   IYVCGPTVYDYIHIGNLRPILTIDILNRVKKYFKYE--LFFLHNITNIDDKIIKKAILE- 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGH 144
                N   + I+    + ++K         PT   + TN    I   IYL+Q     G 
Sbjct: 64  -----NKTEAEISEFYYKDYMKKLKLFNIQKPTKIVKVTNELNTIKNYIYLLQK---QGF 115

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
            Y+ N+++ F+TS + NYG  S +KI+     ++     +K N  DF+LWK++T +   +
Sbjct: 116 TYQENDDLYFNTSKVKNYGHISGQKINSLVSSSKTQ---YKSNANDFVLWKKTT-LGIKY 171

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
            S  G GRPGWH ECSA+   Y  K   DIH GG+DLIFPHHENE AQ     +   T  
Sbjct: 172 YSLLGLGRPGWHTECSALIFKYFNKQTIDIHSGGIDLIFPHHENENAQHFALTKKNITKK 231

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+H G + +   KMSKS  N   ++  +E        +   V R  +L +    PID T
Sbjct: 232 -WVHVGQIKINNEKMSKSLNNVFLVDNFVE-------KYHPDVYRHILLTSSISGPIDLT 283

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTVSAIQALHKLARESTKNHD 380
            + L   +  + ++ +      I     L  +YN    L   S     +K      KN D
Sbjct: 284 NELLEANKNKIIQYKKAFFEHLINPRKSLKKVYNPILKLFLQSKFAQANKELNLLLKNKD 343

Query: 381 ---LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
              L  IFN    +LG     + LNK     +EK  +    L   K +  AD IR++L +
Sbjct: 344 YANLSFIFN----VLGFIFATKKLNKTDFALLEKWKK----LKSEKNYQKADKIREKLWN 395

Query: 438 K 438
           K
Sbjct: 396 K 396


>gi|29833189|ref|NP_827823.1| cysteinyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|61216619|sp|Q828M2|MSHC_STRAW RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|29610311|dbj|BAC74358.1| putative ATP-dependent l-cysteine: 1D-myo-inositoyl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase
           [Streptomyces avermitilis MA-4680]
          Length = 409

 Score =  193 bits (490), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/345 (34%), Positives = 179/345 (51%), Gaps = 31/345 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T    +       P  + R+YVCG T YD  H+G+A     FD++ R+  +  
Sbjct: 17  RDLRIHDTATGGVIPLH---PGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII--TSKNTQQFVKDTTRLACLAP 119
            ++ V YV+N+TD+DD ++ERA +        D +  +    K T  F +D T L  L P
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAER--------DGVDWVGLAEKETALFREDMTALRMLPP 123

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR------RKIDEQ 173
            H   A   IP ++ L++ +   G AYE + ++ F   + P++G  S       R +  +
Sbjct: 124 QHYIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVEADPHFGKVSNLDAAAMRLLSAE 183

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFD 232
           + G   P++  KKNP D +LW  +   EP W+ +  GRGRPGWHIEC A++  +LG  FD
Sbjct: 184 RGGD--PDRPGKKNPLDPMLWMAAREGEPSWDGASLGRGRPGWHIECVAIALDHLGMGFD 241

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE   + +         A  ++H G + L G KMSKS GN + +++L 
Sbjct: 242 VQGGGSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALNGEKMSKSKGNLVFVSKLR 301

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
                     PA  IRLA+L  HYR   ++T   L EA   L  W
Sbjct: 302 RDGVD-----PA-AIRLALLAHHYRSDWEWTDAVLEEALARLGTW 340


>gi|302206181|gb|ADL10523.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276423|gb|ADO26322.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 416

 Score =  193 bits (490), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 209/397 (52%), Gaps = 41/397 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           K  + +Y+T +R I   + ++ SN  + +YVCG T YD  H+G+A   + FD++ R L  
Sbjct: 16  KVALSLYDTADRVI---KPVNCSNGEVGVYVCGITPYDSTHLGHAATYLAFDLINRQL-- 70

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACL 117
                 V +V+NITD+DD + ERA +        D +S   + +     F  D   L+ +
Sbjct: 71  IDAGHTVHFVQNITDVDDPLFERAER--------DGVSWRELGTDQINLFRSDMEALSVI 122

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYG---SFSRRKI 170
            P     A   I ++I ++Q ++ +G AY    +   +I   TS+  ++G   ++SR  +
Sbjct: 123 PPRDYVGAMEAIDEVIEMVQALLDNGSAYIVDVDQYRDIYASTSATSHFGYESNYSRDLM 182

Query: 171 DE---QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           +E   ++ G   PE+  KK+P D ++W+ +   EP W++P+G GRPGWHIECSA++++ L
Sbjct: 183 EEFFAERGGD--PERPGKKDPLDALIWRSARKGEPSWDAPFGAGRPGWHIECSAIATNRL 240

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  F I GGG DLIFPHHE   A +  A  + + AN ++H G + L+G KMSKS GN + 
Sbjct: 241 GNNFAIQGGGSDLIFPHHEFSAAHAEAAHHVHRMANHYVHAGMIALDGVKMSKSLGNLVF 300

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           +++L               IRL +   HYR P +++ + L++AE     W   + +   +
Sbjct: 301 VSQLTADGHH------PSAIRLGLYSGHYRSPREWSEKILSDAEKRRELWINAADTATDL 354

Query: 348 DPA------VLSALYNDLNTVSAIQALHKLARESTKN 378
             A      +   L  DL+T  A+ A+   A+   KN
Sbjct: 355 QAAQNLVASIRFYLSQDLDTPKALAAVDAWAKAIEKN 391


>gi|300858471|ref|YP_003783454.1| mshC ligase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685925|gb|ADK28847.1| MshC ligase [Corynebacterium pseudotuberculosis FRC41]
 gi|302330740|gb|ADL20934.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 416

 Score =  192 bits (489), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/397 (32%), Positives = 209/397 (52%), Gaps = 41/397 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           K  + +Y+T +R I   + ++ SN  + +YVCG T YD  H+G+A   + FD++ R L  
Sbjct: 16  KVALSLYDTADRVI---KPVNCSNGEVGVYVCGITPYDSTHLGHAATYLAFDLINRQL-- 70

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACL 117
                 V +V+NITD+DD + ERA +        D +S   + +     F  D   L+ +
Sbjct: 71  IDAGHTVHFVQNITDVDDPLFERAER--------DGVSWRELGTDQINLFRSDMEALSVI 122

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYG---SFSRRKI 170
            P     A   I ++I ++Q ++ +G AY    +   +I   TS+  ++G   ++SR  +
Sbjct: 123 PPRDYVGAMEAIDEVIEMVQALLDNGSAYIVDVDQYRDIYASTSATSHFGYESNYSRDLM 182

Query: 171 DE---QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           +E   ++ G   PE+  KK+P D ++W+ +   EP W++P+G GRPGWHIECSA++++ L
Sbjct: 183 EEFFAERGGD--PERPGKKDPLDALIWRSARKGEPSWDAPFGAGRPGWHIECSAIATNRL 240

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  F I GGG DLIFPHHE   A +  A  + + AN ++H G + L+G KMSKS GN + 
Sbjct: 241 GNNFAIQGGGSDLIFPHHEFSAAHAEAAHHVHRMANHYVHAGMIALDGVKMSKSLGNLVF 300

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           +++L               IRL +   HYR P +++ + L++AE     W   + +   +
Sbjct: 301 VSQLTADGHH------PSAIRLGLYSGHYRSPREWSEKILSDAEKRRELWINAADTATDL 354

Query: 348 DPA------VLSALYNDLNTVSAIQALHKLARESTKN 378
             A      +   L  DL+T  A+ A+   A+   KN
Sbjct: 355 QAAQNLVASIRFYLSQDLDTPKALAAVDAWAKAIEKN 391


>gi|13432247|sp|Q49784|MSHC_MYCLE RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
          Length = 412

 Score =  192 bits (489), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/414 (32%), Positives = 204/414 (49%), Gaps = 37/414 (8%)

Query: 4   KIKIYNTLERKITEFQA-IDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++Y+T +R++    A + P+    MYVCG T YD  H+G+A   + FD+++RL     
Sbjct: 15  ELRLYDTSDRQVRPVSAAVAPTCKATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLG 74

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV+N+TD+DD + ERA +    +   D    +  +    F  D   L  L P  
Sbjct: 75  HE--VHYVQNVTDVDDPLFERADRN--GVDWRD----LAEREVALFRDDMASLRILPPHD 126

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRKID------E 172
              AT  I +++ L+  +++ G AY  ++E   I F   +   +G  S    D      E
Sbjct: 127 YVAATETIVEIVELVDKMLVSGAAYVIDDEYPDIYFRADATLQFGYESGYDRDTMLRLYE 186

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           Q  G   P +  K    D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   D
Sbjct: 187 QSGGD--PRRPGKNGELDALLWRAARPGEPSWSSPFGPGRPGWHVECAAIALSRIGIGLD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A + C     + A  ++H G +  +  KMSKS GN + ++ L 
Sbjct: 245 IQGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDEHKMSKSRGNLVLVSTLR 304

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-- 350
                     P   IRL +L  HYR    ++ Q L +A   L +W   ++     D A  
Sbjct: 305 AQGA------PPSAIRLGLLAGHYRADRFWSSQLLDDAIARLHRWRTAASMPAGPDVADV 358

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTK--NHD-LLPIFNASA--HILGIEV 396
              V   L +DL+T  AI AL     ++ +   HD   P   A+A   +LG+++
Sbjct: 359 IARVRGYLADDLDTPKAIAALDGWVTDALEYGGHDAAAPKLLATAIDALLGVDL 412


>gi|16518968|gb|AAL25085.1| CysS [Wolbachia sp. wMelPop]
          Length = 204

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 95/211 (45%), Positives = 139/211 (65%), Gaps = 12/211 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFTPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  I++  T+ F +D   + C  PTH+P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESISTYYTKAFHEDMRSINCAEPTHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATKNVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPME----PGWESPWGRG 211
           KK+P DF+LWK +  ++      W SPWG G
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEG 204


>gi|315506205|ref|YP_004085092.1| cysteine/1-d-myo-inosityl 2-amino-2-deoxy-alpha-d-glucopyranoside
           ligase [Micromonospora sp. L5]
 gi|315412824|gb|ADU10941.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micromonospora sp. L5]
          Length = 412

 Score =  192 bits (489), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/360 (33%), Positives = 185/360 (51%), Gaps = 31/360 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A  MI FD++ R+ R    +  V YV+N+TDIDD ++ERA ++ 
Sbjct: 40  MYVCGITPYDATHLGHAATMITFDLVQRMWRDAGLD--VRYVQNVTDIDDPLLERAERD- 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 +   ++  + T  F +D   L  + P H   A   IP +   +  ++  G AY 
Sbjct: 97  -----GEDWKVLAMRETALFREDMEALRMIPPAHYVGAVESIPDIAEKVLMLLKDGAAYR 151

Query: 147 --EANNEIIFDTSSIPNYG---SFSRRKIDE---QKMGTRVPEKYHKKNPADFILWKRST 198
             +   ++ FD S+ P +G   + +R ++ E   ++ G   PE+  K++P D +LW+ + 
Sbjct: 152 LDDGTGDVYFDISAAPRFGYESNLTREQMIELFAERGGD--PERAGKRDPLDPLLWRGAR 209

Query: 199 PMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W     G GRPGWHIEC+ ++ + LG   D+ GGG DLIFPHHE   A +     
Sbjct: 210 EGEPSWPGGDLGPGRPGWHIECTVIALNLLGDRIDVQGGGNDLIFPHHECSAAHAERLTG 269

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A+ ++H G + L+G KMSKS GN + ++ L   K           +RLA++  HYR
Sbjct: 270 EAPFADHYVHAGMIGLDGEKMSKSQGNLVFVSRLRADKV------DPMAVRLALMSGHYR 323

Query: 318 EPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
               +T   LTEA+  L +W +        S   +  AV   L +DL+T  A+ A    A
Sbjct: 324 SDRSWTDDLLTEAQERLGRWRRAAAAPAGPSGAALLAAVRERLADDLDTPGALAAADSWA 383


>gi|25028195|ref|NP_738249.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507253|ref|ZP_05750153.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium efficiens YS-314]
 gi|61216662|sp|Q8FTD0|MSHC_COREF RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|23493479|dbj|BAC18449.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259165196|gb|EEW49750.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium efficiens YS-314]
          Length = 430

 Score =  192 bits (487), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/377 (34%), Positives = 199/377 (52%), Gaps = 37/377 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSN----IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + +Y+T ++++   + + PS     + MYVCG T YD  H+G+A   + FD++YR+L   
Sbjct: 19  LALYDTADQQVKPVE-VPPSGSGTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRVL--L 75

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V YV+NITD+DD + ERA ++       D   + TS+    F KD   LA + P 
Sbjct: 76  DNDHQVHYVQNITDVDDPLFERAERDG-----VDWRELGTSQ-IDLFRKDMETLAVIPPK 129

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSI---------PNYGSFSRRKI 170
               A   I ++I ++  ++  G AY  ++    D  +SI          NY + +  ++
Sbjct: 130 DYIGAIESIDEVIEMVSTLLEEGAAYVVDDPEYPDVYASINATENFGYESNYDAATMAEL 189

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
             ++ G   P++  K+NP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  
Sbjct: 190 FAERGGD--PDRPGKRNPMDALLWRAAREGEPSWESPFGPGRPGWHIECSAIATNRLGHS 247

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDI GGG DL+FPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ 
Sbjct: 248 FDIQGGGSDLMFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVHR 307

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           L       G       IRL +   HYR   D++ + L  AE  L+ W    T    +  A
Sbjct: 308 LTAAGHEPG------AIRLGVYAHHYRGDRDWSDEILAAAEARLALWRSAITVATDVQAA 361

Query: 351 VLSA------LYNDLNT 361
           V +       L NDL+T
Sbjct: 362 VDAVAQLRTHLSNDLDT 378


>gi|66818080|ref|XP_642733.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997262|sp|Q54ZY3|SYCM_DICDI RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|60470862|gb|EAL68834.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 583

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 144/447 (32%), Positives = 215/447 (48%), Gaps = 47/447 (10%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I  Y CGPTVY  +HIG+AR  +  D++ R+L  Y+    + +V  +TDIDDKII +++Q
Sbjct: 77  ISWYTCGPTVYSSSHIGHARNYMTVDIIQRILINYFRFNII-HVMGLTDIDDKIINKSKQ 135

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E  S       S ++ K  Q+F +D   L    P    R + HI ++I  I+ I  +   
Sbjct: 136 ELISA------SELSKKFEQEFFEDLKSLNIKPPMFTTRVSEHIDEIIKYIEKIKENQLT 189

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--------RS 197
           YE+   +IFD +        S R  ++Q        +  KK+  DF+LWK          
Sbjct: 190 YESTKSVIFDVNKFGIDRYCSLRAANQQIKSDDTLLEKDKKSSQDFVLWKAYNENIDIDG 249

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ------ 251
           T     W+SP+G+GRPGWHIECSAM         D+H GG+DL FPHH+NEIAQ      
Sbjct: 250 TGNPVCWDSPFGKGRPGWHIECSAMIDSIFKDHLDVHSGGVDLEFPHHQNEIAQCEGHSH 309

Query: 252 SCCADRIEKT--ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           S  +   E T  AN + H G L L   KMSKS GN ITI + L         + A  +R 
Sbjct: 310 SHGSGDAESTQWANYFFHIGHLILNNEKMSKSLGNVITIRDFLS-------RYSANSLRW 362

Query: 310 AMLMTHYREPIDF---TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
             L+  Y +P+ F   T+Q     EI    W +   SK  ++   ++ +    N   +I+
Sbjct: 363 ICLIHKYNDPLSFSDETLQLCISKEIKFLNWFKIVRSKLKLEQTSVNKVKKTFN--HSIE 420

Query: 367 ALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS-------IAIEKLVQER 416
            L++L+   TK     DL   FN  + I  +E+  +  N++++         ++  V+  
Sbjct: 421 LLNQLSE--TKYLIEKDLKDDFNTPSVIKRLELLMKQTNESMNSIDTDLLFNVQDYVESI 478

Query: 417 LILLKMKKFSSADYIRKQLESKGFILE 443
           L +  ++  S      K  ES  F+LE
Sbjct: 479 LNIFGLEVNSEISDHNKTDESNQFLLE 505


>gi|289705192|ref|ZP_06501594.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micrococcus luteus SK58]
 gi|289558082|gb|EFD51371.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micrococcus luteus SK58]
          Length = 422

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/423 (30%), Positives = 205/423 (48%), Gaps = 49/423 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T   + T     D     +YVCG T YD  H+G+A   + FD+L+R  R    E
Sbjct: 18  RLRLHDTATGR-TRHPGNDAQRASLYVCGITPYDATHLGHASTYVAFDLLHRYWRAAGLE 76

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD ++ERA               +  + T  F  D   L  LAP H  
Sbjct: 77  --VAYVQNVTDVDDPLLERAEA------TGVDWRALAEEQTDLFRADMAALEVLAPGHYV 128

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPN-----YGSFSRRKID 171
            AT  +  ++  ++ ++  G AY       E + ++ FD  +  +      G  S   +D
Sbjct: 129 GATEAVGLVVDAVETMLAAGRAYRVPGGDGEPDGDVYFDVRAAQSATDWRLGQVSAMGLD 188

Query: 172 E------QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSS 224
           E      ++ G   P++  K++P D +LW+     EP W+    G GRPGWHIECS +S 
Sbjct: 189 EMAAVFPERGGD--PDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIECSVISR 246

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +L   F + GGG DL FPHHE   A +   D +   A+ + H G + L+G KMSKS GN
Sbjct: 247 AHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGL-PLAHTYAHTGMVALDGEKMSKSLGN 305

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------P 338
              ++ L        R      +R A+L  HYR   +++ Q L +A+  +++W      P
Sbjct: 306 LELVSRLR------ARGVEPVAVRAAILAHHYRSDWEWSEQVLADAQARVARWRAALDGP 359

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----HDLLPIFNASAHILG 393
             +    ++D AV +AL +DL+   A++AL   A  +         D +P+ +  A +LG
Sbjct: 360 HAAAGVAVLD-AVHAALSDDLDAPRALEALDAWAAGTLPGLVEAAADPVPVIDVVAALLG 418

Query: 394 IEV 396
           + +
Sbjct: 419 LRL 421


>gi|54024903|ref|YP_119145.1| cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|61216443|sp|Q5YVL0|MSHC_NOCFA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|54016411|dbj|BAD57781.1| putative ATP-dependent L-cysteine:1D-myo-inosityl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase [Nocardia
           farcinica IFM 10152]
          Length = 412

 Score =  191 bits (486), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/390 (33%), Positives = 205/390 (52%), Gaps = 41/390 (10%)

Query: 5   IKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y+T +R++   + + P +   MYVCG T YD  H+G+A   + FD++ R+LR   G 
Sbjct: 19  LRLYDTADRQV---RPVAPGATATMYVCGITPYDATHLGHAATYLTFDLVNRVLRD--GG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTH 121
             V YV+N+TD+DD + ERA +        D +    + S+  + F  D   L  L P  
Sbjct: 74  HDVHYVQNVTDVDDPLFERAAR--------DGVDWRELGSREIELFRTDMAALRVLPPRE 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG--SFSRRKIDEQKM 175
              A   + +++  +Q ++ +G AY  ++    +I F T +   +G  S   R   E+  
Sbjct: 126 YVGAVESVEEVVEFVQKLLANGAAYVVDDPDFPDIYFRTDATEQFGYESGYDRATMERLF 185

Query: 176 GTRV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
             R   P++  K++P D +LW+ + P EP W +P+G GRPGWHIECSA++ + LG  FDI
Sbjct: 186 AERGGDPDRPGKRDPLDALLWRAARPGEPSWPAPFGAGRPGWHIECSAIALNRLGPEFDI 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLI+PHHE   A +       + A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 246 QGGGSDLIYPHHEYSAAHAESVVAGRRFARHYVHAGLIGLDGEKMSKSRGNLVLVSTL-- 303

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTSKGIIDPAVL 352
            +K G    PA  IRL +L  HYR+   +T   L  A   L++W   T+ S G   PA  
Sbjct: 304 -RKDGVD--PA-AIRLGLLDGHYRQDRMWTDAVLEAALARLARWRSATALSAG---PAAH 356

Query: 353 SA-------LYNDLNTVSAIQALHKLARES 375
                    L +DL++  A+ A+     E+
Sbjct: 357 DTIARLRQHLADDLDSPKALAAVDNWVTEA 386


>gi|330805180|ref|XP_003290564.1| hypothetical protein DICPUDRAFT_155084 [Dictyostelium purpureum]
 gi|325079310|gb|EGC32916.1| hypothetical protein DICPUDRAFT_155084 [Dictyostelium purpureum]
          Length = 591

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/478 (30%), Positives = 225/478 (47%), Gaps = 74/478 (15%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I  Y CGPTVY  +HIG+AR  +  D++ R+L+ Y+    + +V  +TDIDDKI+ ++R+
Sbjct: 82  ISWYTCGPTVYSSSHIGHARNYVTVDIIQRILQDYFRLNII-HVMGMTDIDDKILIKSRE 140

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           +  S      +S I  K   +F++D   L    P    R + H+ ++I  I+ I  +   
Sbjct: 141 KQISAS---ELSRIYEK---EFIEDLKSLNIKPPMFTTRVSEHMGEIINYIEKIRDNNLT 194

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR--------S 197
           YE+   I F+          + R I+E      + +   K N  DF+LWK          
Sbjct: 195 YESTKSIFFNVEKFGFDRYSTLRAINEHGESKDLVDDTKKSN-QDFVLWKSFNKDLDYDG 253

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ------ 251
                GWESP+G+GRPGWHIECSAM +   G   D+H GG+DL FPHH+NEIAQ      
Sbjct: 254 KNEAVGWESPFGKGRPGWHIECSAMINSIFGNHLDVHSGGIDLEFPHHQNEIAQCEGHHS 313

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            C  D   + AN ++H G L+L+  KMSKS  N ITI + L+        +    +R   
Sbjct: 314 ECNKDGSYQWANYFLHVGHLHLKNVKMSKSLNNVITIRDFLD-------KYTPNTLRWLC 366

Query: 312 LMTHYREPI---DFTVQRLTEAEILLSKWPQ-------------TSTSKGIIDPAVL--- 352
           L+  Y +P+   D T++   E E+L   W +                 K   D A L   
Sbjct: 367 LIHRYTDPLVYSDETLKLCVEKELLFINWFKFVQNKLDEELVSVDKVKKTFNDSAALLEQ 426

Query: 353 ---------SALYNDLNT---VSAIQALHKLARESTKNHDLLPIFNASAHI------LGI 394
                      L ND +T   V ++Q+L K  RES    D   ++N   +I       G+
Sbjct: 427 LSNTKLKVEKDLANDFDTPAVVESLQSLMKQTRESIDTIDTDLLYNIQDYIKSILNVFGL 486

Query: 395 EVCK-EHLNKNISIAIEKLVQERLILLK--MKKF-----SSADYIRKQLESKGFILED 444
           +V    +L  N+     + + E L+ L+  +KK      +S D   K+++SK + + D
Sbjct: 487 DVSNLSNLPTNVGDNTNEFLLETLMDLRSDLKKLLKDVPNSQDPSFKEIKSKLYKITD 544


>gi|134098795|ref|YP_001104456.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|310947213|sp|A4FBV6|MSHC_SACEN RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|133911418|emb|CAM01531.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 412

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 38/414 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++++T   ++    A      RMYVCG T YD  H+G+A   + FD+++R+  +   
Sbjct: 17  RPLRLFDTAAGEVRPVTA--GRTARMYVCGITPYDATHLGHAATYLAFDLVHRI--WLDN 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TDIDD ++ERA ++      N+   ++  + T  F +D   L  + PT  
Sbjct: 73  GHDVHYVQNVTDIDDPLLERANRD------NEDWVVLAMRETALFREDMEALRVVPPTDF 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSI------PNYGSFSRRKIDE 172
             A   IP++   +  ++  G AY  +++    + F  S+        NY   +   +  
Sbjct: 127 IGAVESIPEIEEAVGKLLASGAAYRVDDDEYPDVYFRHSATGRFGYESNYDEATMLDLSA 186

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K++P D +LW+ +   EP WES  G GRPGWH+ECS ++ + LG  FD
Sbjct: 187 ERGGD--PDRKGKEHPLDALLWRMARDGEPSWESELGPGRPGWHLECSVIALNRLGMGFD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE   A +         A  + H G + L+G KMSKS GN + ++ L 
Sbjct: 245 VQGGGSDLAFPHHEFSAAHAEALAGDHPFARHYCHAGMIGLDGEKMSKSKGNLVFVSRLR 304

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--IIDPA 350
                G R  P   IRLA+L  HYR    +T   LT+    L++W +    +     +P 
Sbjct: 305 -----GDRVDPM-AIRLALLDGHYRSDRSWTADALTKGSARLARWREAVALEAGPSAEPV 358

Query: 351 V---LSALYNDLNTVSAIQAL-----HKLARESTKNHDLLPIFNASAHILGIEV 396
           V      L +DL+T  A+ A+       L R          I +A   +LG+++
Sbjct: 359 VERLRDRLSDDLDTERALLAVDAWVDEALCRRGGDAEAPAAIRDAVDGLLGVQL 412


>gi|291005851|ref|ZP_06563824.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 404

 Score =  191 bits (484), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 204/414 (49%), Gaps = 38/414 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++++T   ++    A      RMYVCG T YD  H+G+A   + FD+++R+  +   
Sbjct: 9   RPLRLFDTAAGEVRPVTA--GRTARMYVCGITPYDATHLGHAATYLAFDLVHRI--WLDN 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TDIDD ++ERA ++      N+   ++  + T  F +D   L  + PT  
Sbjct: 65  GHDVHYVQNVTDIDDPLLERANRD------NEDWVVLAMRETALFREDMEALRVVPPTDF 118

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSI------PNYGSFSRRKIDE 172
             A   IP++   +  ++  G AY  +++    + F  S+        NY   +   +  
Sbjct: 119 IGAVESIPEIEEAVGKLLASGAAYRVDDDEYPDVYFRHSATGRFGYESNYDEATMLDLSA 178

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K++P D +LW+ +   EP WES  G GRPGWH+ECS ++ + LG  FD
Sbjct: 179 ERGGD--PDRKGKEHPLDALLWRMARDGEPSWESELGPGRPGWHLECSVIALNRLGMGFD 236

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE   A +         A  + H G + L+G KMSKS GN + ++ L 
Sbjct: 237 VQGGGSDLAFPHHEFSAAHAEALAGDHPFARHYCHAGMIGLDGEKMSKSKGNLVFVSRLR 296

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--IIDPA 350
                G R  P   IRLA+L  HYR    +T   LT+    L++W +    +     +P 
Sbjct: 297 -----GDRVDPM-AIRLALLDGHYRSDRSWTADALTKGSARLARWREAVALEAGPSAEPV 350

Query: 351 V---LSALYNDLNTVSAIQAL-----HKLARESTKNHDLLPIFNASAHILGIEV 396
           V      L +DL+T  A+ A+       L R          I +A   +LG+++
Sbjct: 351 VERLRDRLSDDLDTERALLAVDAWVDEALCRRGGDAEAPAAIRDAVDGLLGVQL 404


>gi|296129854|ref|YP_003637104.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Cellulomonas flavigena DSM 20109]
 gi|310947177|sp|D5UFA8|MSHC_CELFN RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296021669|gb|ADG74905.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Cellulomonas flavigena DSM 20109]
          Length = 415

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 197/389 (50%), Gaps = 39/389 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++ +T   ++    A  P + R+YVCG T YD  H+G+A   + FDVL R   +   
Sbjct: 17  EPVRVLDTATGRLV-VAATGP-HARLYVCGITPYDATHLGHASTYVAFDVLVRA--WLDE 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTY  N+TD+DD ++ERA      +   D    + ++ T  +  D T L  + P   
Sbjct: 73  GKTVTYASNVTDVDDPLLERATAT--GVDWRD----LAAQQTALYASDMTTLGVVPPDVY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-----EANNEIIFDTSSIPNYGSFSRRK------ID 171
                 +PQ++  +  ++    AY     +  +++  D S+ P +GS +  +      + 
Sbjct: 127 RGVVESVPQVVAAVDALLSRDAAYRLPAPDGGDDVYADLSADPGFGSVAGLEHAAMLALS 186

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKV 230
            ++ G   P++  K++P D +LW+   P EP W++P  GRGRPGWH+EC+ ++S  LG  
Sbjct: 187 AERGGD--PDRPGKRSPLDPLLWRAERPGEPAWDAPGLGRGRPGWHVECAVIASDGLGVP 244

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+ GGG DL FPHHE+  +         + A   +H G +   G KMSKS GN + +++
Sbjct: 245 FDVQGGGSDLAFPHHESSASHLRVLTGTPQPAAAHVHTGMVGYRGHKMSKSLGNLVLVSQ 304

Query: 291 LLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
           L+            P+ +RLA+L   YR   ++T   L  A+  +++W +  +  G    
Sbjct: 305 LVADGV-------EPMAVRLAVLAHRYRSDWEWTDDVLATAQQRVARWRRALSGNGGPAA 357

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLA 372
             ++D  V +A+ +DL+T  A+  +   A
Sbjct: 358 QPVLD-GVRAAVADDLDTPRALAVVDAWA 385


>gi|15841621|ref|NP_336658.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|13881872|gb|AAK46472.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 375

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 131/393 (33%), Positives = 194/393 (49%), Gaps = 42/393 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD+++RL      E  + YV+NITDIDD + ERA ++ 
Sbjct: 1   MYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGHE--LHYVQNITDIDDPLFERADRD- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   D    +       F +D   L  L P     AT  I +M+ LI+ ++  G AY 
Sbjct: 58  -GVDWRD----LAQAEVALFCEDMAALRVLPPQDYVGATEAIAEMVELIEKMLACGAAYV 112

Query: 148 ANNE------IIFDTSSIPNYGSFSRRKID------EQKMGTRVPEKYHKKNPADFILWK 195
            + E      I F   +   +G  S    D      E++ G   P +  K +  D +LW+
Sbjct: 113 IDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGD--PRRPGKSDELDALLWR 170

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
            + P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C 
Sbjct: 171 AARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECV 230

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
               + A  ++H G +  +G KMSKS GN + ++ L               +RL +L  H
Sbjct: 231 SGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALRAQDV------EPSAVRLGLLAGH 284

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------LYNDLNTVSAIQAL 368
           YR    ++ Q L EA   L +W +T+T+     PA +         L +DL+T  AI AL
Sbjct: 285 YRADRFWSQQVLDEATARLHRW-RTATAL-PAGPAAVDVVARVRRYLADDLDTPKAIAAL 342

Query: 369 HKLARESTK--NHDL-LPIFNASA--HILGIEV 396
                ++ +   HD   P   A+A   +LG+++
Sbjct: 343 DGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL 375


>gi|258652959|ref|YP_003202115.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Nakamurella multipartita DSM 44233]
 gi|310947206|sp|C8X8S1|MSHC_NAKMY RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|258556184|gb|ACV79126.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Nakamurella multipartita DSM 44233]
          Length = 405

 Score =  190 bits (483), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/393 (31%), Positives = 201/393 (51%), Gaps = 38/393 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +++Y++      E +  DP  +  MYVCG T YD  H+G+A   + FD+++R+  +  
Sbjct: 17  RPLRLYDS---ATGEVRPTDPGPVATMYVCGITPYDATHLGHAATYLAFDLVHRM--WLD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAP 119
               V YV+NITDIDD ++ERA++        D +S   +  +    F  D T L  + P
Sbjct: 72  AGHQVHYVQNITDIDDPLLERAQR--------DGVSWRKLADREIGLFRDDMTALRVIPP 123

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRR------K 169
                A   + ++   +Q +I  G AY   +E    + FD ++   +G  SR       +
Sbjct: 124 ADYIGAVEAMDEVTAAVQELIDAGAAYRVPDEQYPDVYFDVTASGQFGYESRYDEATMLR 183

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +  ++ G   P++  K+   D +LW+   P EP W SP G GRPGWHIEC+ ++ + +G 
Sbjct: 184 LSAERGGD--PDRPGKRQRLDPLLWRVERPQEPSWSSPMGPGRPGWHIECAVIAGNRIGP 241

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           V D+ GGG DLIFPHHE   A +         A  + H G + L+G KMSKS GN + ++
Sbjct: 242 VIDLQGGGSDLIFPHHECSAAHAEVLSGKRPFARHYTHAGMIGLDGEKMSKSRGNLVFVS 301

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
            LL       +      +RL +L  HYR+   ++ + LT AE  L++W   +   G+   
Sbjct: 302 RLLH------QGVDPMAMRLGLLAGHYRQDRAWSDEVLTAAEARLARWRAAAARTGVDAD 355

Query: 350 AVLSA----LYNDLNTVSAIQALHKLARESTKN 378
           +V+ A    L +DL+T + I+AL   A + T +
Sbjct: 356 SVVQAIRDGLADDLDTPTVIEALDAWAADETLD 388


>gi|159111673|ref|XP_001706067.1| Cysteinyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|11528339|gb|AAG37230.1| cysteinyl-tRNA synthetase [Giardia intestinalis]
 gi|157434160|gb|EDO78393.1| Cysteinyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 645

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/439 (30%), Positives = 211/439 (48%), Gaps = 62/439 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           + N+L  ++ E +   PS +  Y+CGPTVYD  H+G+AR  + FDV+ R+L  Y+G + V
Sbjct: 10  LTNSLTGRLEELRTHAPSTVLAYICGPTVYDSTHLGHARTYVTFDVVRRILEDYFGLR-V 68

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y  NITD+DDKII RA +   S      I  I  K  Q+F+ D   L+    T   R T
Sbjct: 69  RYQCNITDVDDKIIARAVERGSS------IFDICRKYEQEFLSDMHTLSVRPFTVVTRVT 122

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-------DEQKM---- 175
            ++  +I  IQ I+ +G AY +   + FD ++  + G +S  K+       DE ++    
Sbjct: 123 EYMADIILFIQKIMDNGFAYVSAGSVYFDVAAARSAG-YSYPKLRPLGSSSDELQLLIQN 181

Query: 176 ------GTRVPEKYHKKNPADFIL---WKRSTPMEPGWESPWGR------------GRPG 214
                   RV E   K++ +DF L   WK + P +  W++ +              GRPG
Sbjct: 182 ADGMDSKNRVSE---KRSASDFALWKAWKETEPEDAKWDATFSHKNGAVSELITLPGRPG 238

Query: 215 WHIECSAMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           WHIECSAM++  LGK     FD+H GG DL FPHH+NE+ Q       +     ++H+G 
Sbjct: 239 WHIECSAMAAAVLGKDTGGAFDLHLGGCDLQFPHHDNELIQLETWAGKKNMIGCFLHSGH 298

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           L + G  MSKS  NF T+ E+L         + A  +R+   M  Y   +D+++  +  A
Sbjct: 299 LKIAGDVMSKSKKNFKTVREILSI-------FTANQVRMLFCMVPYSASLDYSISMMDAA 351

Query: 331 -------EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
                     LS   Q    +  +   + +  Y+        Q +  L+   T   + + 
Sbjct: 352 VAKDKKITSFLSNCRQIIQHEEELSEPIKNLRYSTTEEALEAQTIEFLSNVDTAFRNDIN 411

Query: 384 IFNASAHI-LGIEVCKEHL 401
           I +A +H+ L I+ CK ++
Sbjct: 412 IVSAMSHVMLLIDNCKAYI 430


>gi|38233849|ref|NP_939616.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|61216544|sp|Q6NH81|MSHC_CORDI RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|38200110|emb|CAE49790.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 414

 Score =  190 bits (482), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 195/384 (50%), Gaps = 33/384 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T ++ I   + +D   + +YVCG T YD  H+G+A   + FD++ R L    G +
Sbjct: 19  LSLFDTSDQLIKPVE-VDTPEVGVYVCGITPYDSTHLGHAATYLTFDLINRQL-IDAGHR 76

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            V +V+NITD+D+ + ERA        + D +    + S     F  D   L+ + P H 
Sbjct: 77  -VHFVQNITDVDEPLFERA--------LRDGVDWRELGSSQIDLFRSDMENLSVIPPRHY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYG--SFSRRKIDEQKMG 176
             A   IP++I +++ ++ +G AY    ++  +I    ++   +G  S   R++ EQ   
Sbjct: 128 VGAMESIPEVIAMVETMLANGTAYIVESDSYRDIYASITATTQFGYESHYSRELMEQFFA 187

Query: 177 TRV--PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            R   PE+  KK+  D ++W+     EP W++P+G GRPGWH+ECSA+++H+LG  F I 
Sbjct: 188 ERGGDPERVGKKDSLDALIWRAHRLGEPSWDAPFGAGRPGWHVECSAIATHHLGSHFAIQ 247

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +       + A  ++H G + L+G KMSKS GN + ++ L   
Sbjct: 248 GGGSDLIFPHHEFSAAHAEATFGESRMAGHYVHTGMIGLDGTKMSKSLGNLVFVSRLTS- 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
                  +    IRL +   HYR+  D++   LT A+     W   + +   +       
Sbjct: 307 -----EGYHPSDIRLGVFAGHYRDDRDWSTDLLTAAQERRQAWITAADNARDVQQVQQTI 361

Query: 351 --VLSALYNDLNTVSAIQALHKLA 372
             +   L NDLNT + +  +   A
Sbjct: 362 QKIRHLLANDLNTPAVLAEVDNWA 385


>gi|256384189|gb|ACU78759.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385021|gb|ACU79590.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455708|gb|ADH21943.1| cysteine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 441

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 212/440 (48%), Gaps = 41/440 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y CGPTVY++ HIGNARP+++ DVL R L+       V Y++NITDIDDKII +A  
Sbjct: 19  INLYCCGPTVYNYIHIGNARPVLLVDVLIRYLK--SRNIKVNYLQNITDIDDKIILKALD 76

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
            +    +N+    ++ K T  +++D   L    P      +  + +MI  I+N++    A
Sbjct: 77  NN----LNEL--EVSQKYTTAYLEDLKSLNINQPDKIILISQKMNEMIDFIKNLVDINAA 130

Query: 146 YEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           Y  + ++ FD     N Y   S  K+DE   G R+     K    DF LWK+ T +   W
Sbjct: 131 YVLDGDVYFDIKKYENEYCKLSGYKLDELISGKRIEIDSKKHYSLDFSLWKK-TDIGIKW 189

Query: 205 ESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
            S +G GRPGWH EC  +   Y   +  DIH GG+DL FPHHENE  Q    +  E  A+
Sbjct: 190 NSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKFPHHENERIQFIAKNNKE-LAH 248

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           IW+HNG L +   KMSKS GN I + +         +      +R   L T+Y +P++ +
Sbjct: 249 IWLHNGHLQINDEKMSKSLGNVILVRDF-------NKQHNKNTLRWIFLTTNYTQPLNIS 301

Query: 324 VQRLTEAEILLSKWPQTS--TSKGIID-----PAVLSALY---------NDLNTVSAIQA 367
              + +A     K    S  T + II       ++ S+ Y         +DLNT   +  
Sbjct: 302 DDLIYQANKFFEKLTNLSKKTIQFIIKNDLKIQSINSSEYINKFNEYMEDDLNTSLVLSL 361

Query: 368 LHKLARE-----STKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           +  L ++       KN D   +   S  +IL +       N       ++L  +   L+K
Sbjct: 362 IDLLIKQINKDIVDKNLDNFNLLIGSLNYILDVLGFNNVFNYKFDNKTKELFLKWQELVK 421

Query: 422 MKKFSSADYIRKQLESKGFI 441
            K+F+ AD IR +L  +G +
Sbjct: 422 NKEFNKADIIRNKLIEQGIL 441


>gi|262202368|ref|YP_003273576.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Gordonia bronchialis DSM 43247]
 gi|310947185|sp|D0LDR0|MSHC_GORB4 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|262085715|gb|ACY21683.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Gordonia bronchialis DSM 43247]
          Length = 413

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 183/345 (53%), Gaps = 32/345 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T +R +    A  P+   +YVCG T YD  H+G+A   + FD + R+LR    + 
Sbjct: 19  LRLYDTADRAVRPV-APGPTAT-LYVCGITPYDATHLGHAATYVTFDQVNRVLRDQGHD- 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            V YV+NITD+DD + ERA +        D +    + S+  Q F  D T L  L P   
Sbjct: 76  -VHYVQNITDVDDPLFERAER--------DGVDWRELGSEQIQLFRDDMTALRVLPPRDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYG---SFSRRKIDE--- 172
             A   + ++I  ++ ++  G AY  ++    ++ F T +   +G    + R  +     
Sbjct: 127 IGAMESVDEVIEAVEKLLASGAAYVVDDPEYPDVYFRTDATEQFGYESGYDRATMARFFA 186

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K++P D +LW+ +   EP WE+P+G GRPGWHIECSA++ + LG  FD
Sbjct: 187 ERGGD--PDRAGKRDPLDAVLWRAARDGEPSWEAPFGPGRPGWHIECSAIALNRLGIEFD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A         + A  ++H G + L+G KMSKS GN + ++ L 
Sbjct: 245 IQGGGNDLIFPHHEFSAAHGEALTDSRRFARHYVHTGMVGLDGEKMSKSRGNLVFVSVL- 303

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
             ++ G    PA  IRLA+L  HYR    +T   L  A   L +W
Sbjct: 304 --RRDGVD--PA-AIRLALLADHYRSDRMWTDDVLATAVDRLQRW 343


>gi|253742420|gb|EES99254.1| Cysteinyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 644

 Score =  189 bits (481), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 218/469 (46%), Gaps = 60/469 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I N+L  ++ E +   PS +  Y+CGPTVYD  H+G+AR  + FD+  R+L  Y+G + +
Sbjct: 10  ITNSLTGRLEELRTRAPSTVLAYICGPTVYDSTHLGHARTYVTFDIARRILEDYFGLR-I 68

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y  NITD+DDKII RA      I    +I  I  K   +F+ D   L+    T   R T
Sbjct: 69  HYQCNITDVDDKIIARA------IERGSSIFDICRKYEHEFLSDMRALSVRPFTVLTRVT 122

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG----------------SFSRRKI 170
            ++  +I  IQ II +G AY +   + FD  +  N G                    + +
Sbjct: 123 EYMADIILFIQKIIDNGFAYVSAGSVYFDVVAARNAGYVYPKLRPLGSSSDELQLLIQNV 182

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR------------GRPGWHIE 218
           D      RV EK    + A +  WK + P +  W + +              GRPGWHIE
Sbjct: 183 DGIDSKNRVAEKRSSSDFALWKAWKETEPEDAKWNATFSYKDGDKLEQITLPGRPGWHIE 242

Query: 219 CSAMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           CSAM++  LGK     FD+H GG DL FPHH+NE+ Q     R ++    ++H+G L + 
Sbjct: 243 CSAMAAAVLGKSTEGAFDLHLGGCDLQFPHHDNELIQLETWARNKEMIGYFMHSGHLKIA 302

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G  MSKS  NF T+ E+L         + A  +R+   M  Y   +D+++  +  A    
Sbjct: 303 GDVMSKSKKNFRTVREILSI-------FTANQVRMLFCMVPYNASLDYSISMMDAAVAKD 355

Query: 335 SKWPQ-TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----LPIFNAS 388
            K     +    II    LS    +L   ++ +AL   + E   N D      + I +  
Sbjct: 356 KKITSFLANCHQIIHADELSRPLENLRYDASEEALAAQSMEFLSNIDAAFRNDINIVSVM 415

Query: 389 AHILG-IEVCKEHL------NKNISIAIEKLVQERLI-LLKMKKFSSAD 429
            HI+  I+ CK ++       K I+  +   V+++++ +L +  FS A+
Sbjct: 416 NHIISLIDSCKAYIFACQTREKQINTFLLSSVRDKIVHILSIMGFSYAE 464


>gi|15384254|gb|AAK96213.1|AF405551_1 cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 406

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/357 (35%), Positives = 186/357 (52%), Gaps = 37/357 (10%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           S+M    L         DIH GG DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+ 
Sbjct: 170 SSMVFETLALTDTPYQIDIHAGGADLVFPHHENEACQTRCAFGVE-LAKYWMHNGFVNIN 228

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
             KMSKS GN   I + L       +++   ++R  +L  HYR  ++F  + L  ++  L
Sbjct: 229 NEKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRL 281

Query: 335 SKW----PQTSTSKGIIDP----AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
            K      +   + G I+P     +L  + +DLN   A+  L  +   + +  D  P
Sbjct: 282 DKIYRLKQRVLGTLGGINPNFKKEILECMQDDLNVSKALSVLENMLSSTNEKLDQNP 338


>gi|262043517|ref|ZP_06016634.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259039133|gb|EEW40287.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 296

 Score =  189 bits (481), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/293 (38%), Positives = 157/293 (53%), Gaps = 32/293 (10%)

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           GTR+    +K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG  FDIHG
Sbjct: 2   GTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHG 61

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHENEIAQS  A+      N W+H G + +   KMSKS  NF T+ ++L   
Sbjct: 62  GGSDLIFPHHENEIAQSTSAND-GPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDIL--N 118

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGII 347
           +F  +S     +R  +L  HYR+P++++ + +  A   L++            S      
Sbjct: 119 RFDAQS-----VRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDAW 173

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK----NHD----LLPIFNASAHILG-IEVCK 398
                 A+ +D NT  A+  L +L RE  +    N D    L        ++LG +E   
Sbjct: 174 RARFCEAMDDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSA 233

Query: 399 EHLNKNIS-------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   KN S         IEKL+ +R    +M K+  AD +R +L  +G  LED
Sbjct: 234 DAFLKNRSDLHPAELQLIEKLIHQRGEARRMGKWDKADRLRNELAEQGIDLED 286


>gi|119715257|ref|YP_922222.1| cysteine--tRNA ligase [Nocardioides sp. JS614]
 gi|119535918|gb|ABL80535.1| Cysteine--tRNA ligase [Nocardioides sp. JS614]
          Length = 390

 Score =  189 bits (480), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 175/356 (49%), Gaps = 17/356 (4%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
            + R+YVCG T YD  H+G+A   +  D+L  +L     +  V+  RN+TD+DD ++E A
Sbjct: 41  GSARVYVCGITPYDVTHLGHASTFVWADLLASVLDGTGVD--VSTCRNVTDVDDVLLEAA 98

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           R         D +++    +   F +    L    P HQPRA +++  ++ L Q ++  G
Sbjct: 99  RLRGSHF---DELAVTQEAD---FDRSMRELRVATPAHQPRARHYVDAVVQLAQALLDAG 152

Query: 144 HAYEANNEIIFDTSSIPNYGSFSR-RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
            AYE +  + F    +       R R +   +     P +  K +  D  +W+ S   +P
Sbjct: 153 AAYERDGTVWFRGRDVVARTGLERDRALALAEAYGDQPGEPAKDDSFDVAVWRPSADQQP 212

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPWG GRPGWH EC+AM+    G   D+  GG DL+FPHH  ++A +     +   A
Sbjct: 213 AWASPWGWGRPGWHAECAAMALAVHGPSVDVLVGGDDLVFPHHAYQVAMAEAVSGVAPFA 272

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
              +H G + + G+KM+KS+GN + +++LLE         P   +RL +L   Y EP DF
Sbjct: 273 RAQLHVGEVRIGGQKMAKSSGNLVLVDDLLE-------HLPPAALRLHLLHRRYAEPWDF 325

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDP-AVLSALYNDLNTVSAIQALHKLARESTK 377
              +L EAE LL      +   G  DP A L AL  DL+  +A+        ES +
Sbjct: 326 EAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALRTDLDVPTAVATALDQGGESAR 381


>gi|319949266|ref|ZP_08023346.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437056|gb|EFV92096.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 399

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 130/413 (31%), Positives = 196/413 (47%), Gaps = 42/413 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+++T   ++ E   + P  +  MYVCG T YD  H+G+A   + FD++YR L     E
Sbjct: 1   MKLFDTAGGEVRE---VSPGPVAGMYVCGITPYDTTHLGHAATYLTFDLVYRQLLDAGHE 57

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTH 121
             V YV+N TD+DD + ERA +        D +    +  + T  F +D   L  L P  
Sbjct: 58  --VHYVQNTTDVDDPLFERAER--------DGVDWRELGDRETDLFREDMEALRVLPPRD 107

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY------EANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
              AT  I +++ ++  ++  GHAY      +  +++ +   +  ++G  S    DE  +
Sbjct: 108 YVAATETIDEVVEMVGELLDRGHAYRIDPDVDGYSDVYYRHRATADFGYESGYDDDEMAV 167

Query: 176 G----TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                   P++  K++P D +LW+   P EP W SPWG GRPGWHIECSA++ + LG  F
Sbjct: 168 AFAERGGDPDRPGKEHPLDALLWRVERPGEPSWPSPWGAGRPGWHIECSAIARNRLGMEF 227

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DL FPHHE   A +  A      A  ++H   + L+G KMSKS GN + +  L
Sbjct: 228 DIQGGGSDLAFPHHEFSAAHAEAAAGRRPFARFYVHAAMIGLDGVKMSKSLGNLVRVQAL 287

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
            +      R     +IRL +   HYR    ++   L  A      W +        D A 
Sbjct: 288 RD------RGVDPALIRLGLFAGHYRVDRSWSDDLLERARTRYDLWCRVIARGVGADAAP 341

Query: 352 LSA-----LYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI 394
           + A     L +DL+T  A+  +   A  +    D  P     I  A   +LGI
Sbjct: 342 VIAELRERLADDLDTPGALAVVDAWASATLDGDDSDPSAGAGIATALDALLGI 394


>gi|239917682|ref|YP_002957240.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281413827|ref|ZP_06245569.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|310947191|sp|C5CBT9|MSHC_MICLC RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|239838889|gb|ACS30686.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 422

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/394 (31%), Positives = 193/394 (48%), Gaps = 44/394 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T   + T     D     +YVCG T YD  H+G+A   + FD+L+R  R    E
Sbjct: 18  RLRLHDTATGR-TRHPGNDGRRASLYVCGITPYDATHLGHASTYVAFDLLHRYWRAAGLE 76

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD ++ERA               +  + T  F  D   L  LAP H  
Sbjct: 77  --VAYVQNVTDVDDPLLERAEA------TGVDWRALAEEQTDLFRADMAALEVLAPDHYV 128

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPN-----YGSFSRRKID 171
            AT  +  ++  ++ ++  G AY       E   ++ FD  S  +      G  S   +D
Sbjct: 129 GATEAVGLVVDAVETMLAAGRAYRVPGGDGEPEGDVYFDVRSAQSATDWRLGQVSAMDLD 188

Query: 172 E------QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSS 224
           E      ++ G   P++  K++P D +LW+     EP W+    G GRPGWHIECS +S 
Sbjct: 189 EMAAVFPERGGD--PDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIECSVISR 246

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +L   F + GGG DL FPHHE   A +   D +   A+ + H G + L+G KMSKS GN
Sbjct: 247 AHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGL-PLAHTYAHTGMVALDGEKMSKSLGN 305

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------P 338
              ++ L        R      +R A+L  HYR   +++ Q LT+A+  +++W      P
Sbjct: 306 LELVSRLR------ARGVEPVAVRAAILAHHYRSDWEWSEQVLTDAQARVTRWRAALDGP 359

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
             +    ++D AV +AL +DL+   A++AL   A
Sbjct: 360 HAAAGVAVLD-AVHAALSDDLDAPRALEALDAWA 392


>gi|331703852|ref|YP_004400539.1| Cysteinyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802407|emb|CBW54562.1| Cysteinyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 441

 Score =  189 bits (479), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 141/440 (32%), Positives = 212/440 (48%), Gaps = 41/440 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y CGPTVY++ HIGNARP+++ DVL R L+       V Y++NITDIDDKII +A  
Sbjct: 19  INLYCCGPTVYNYIHIGNARPVLLVDVLIRYLK--SRNIKVNYLQNITDIDDKIILKALD 76

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
            +    +N+    ++ K T  +++D   L    P      +  + +MI  I+N++    A
Sbjct: 77  NN----LNEL--EVSQKYTNAYLEDLKSLNINQPDKIILISQKMNEMIDFIKNLVDINAA 130

Query: 146 YEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           Y  + ++ F+     N Y   S  K+DE   G RV     K    DF LWK+ T +   W
Sbjct: 131 YVLDGDVYFNIKKYENEYCKLSGYKLDELISGKRVEIDSKKHYSLDFSLWKK-TDIGIKW 189

Query: 205 ESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
            S +G GRPGWH EC  +   Y   +  DIH GG+DL FPHHENE  Q    +  E  A+
Sbjct: 190 NSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKFPHHENERIQFIAKNNKE-LAH 248

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           IW+HNG L +   KMSKS GN I + + +       +      +R   L T+Y +P++  
Sbjct: 249 IWLHNGHLQINDEKMSKSLGNVILVRDFI-------KQHNKNTLRWIFLTTNYTQPLNIR 301

Query: 324 VQRLTEAEILLSKWPQTS--TSKGIID-----PAVLSALY---------NDLNTVSAIQA 367
              + +A     K    S  T + II       ++ S+ Y         +DLNT   +  
Sbjct: 302 DDLIYQANKFFEKLTNLSKKTIQFIIKNDLKIKSINSSEYINKFNEYMEDDLNTSLVLSL 361

Query: 368 LHKLARE-----STKNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           +  L ++       KN D   +   S  +IL +       N       ++L  +   L+K
Sbjct: 362 IDSLIKQINKDIVDKNLDNFNLLIGSLDYILDVLGFDNVFNYKFDNKTKELFLKWQELVK 421

Query: 422 MKKFSSADYIRKQLESKGFI 441
            K+F+ AD IR +L  +G +
Sbjct: 422 NKEFNKADIIRNKLIEQGIL 441


>gi|331697134|ref|YP_004333373.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Pseudonocardia dioxanivorans CB1190]
 gi|326951823|gb|AEA25520.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Pseudonocardia dioxanivorans CB1190]
          Length = 412

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/353 (32%), Positives = 182/353 (51%), Gaps = 31/353 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD++ R  R    +  V YV+N+TDIDD ++ERA ++ 
Sbjct: 40  MYVCGITPYDATHLGHAATYLAFDLVNRYWRDLGHD--VHYVQNVTDIDDPLLERAARD- 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 D   ++  + T  F +D   L  + P H   A   + ++   +  ++  G AY 
Sbjct: 97  -----QDDWVVLGMRETALFREDMEALRVVPPRHYIGAVEAMGEIAEFVGKLLAGGSAYR 151

Query: 148 ANN----EIIFDTSSIPNYGSFSRRKIDEQKM------GTRVPEKYHKKNPADFILWKRS 197
            ++    ++ FD+++  ++G  S    DEQ M          P++  K++PAD +LW+ +
Sbjct: 152 IDDPEFPDVYFDSTASGHFGYES--NYDEQTMIALSRERGGDPDRPGKRHPADALLWRMA 209

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
              EP WES  G GRPGWH+EC+A++ + LG   D++GGG DLIFPHHE   A +     
Sbjct: 210 REGEPSWESDLGAGRPGWHVECAAIALNRLGDQIDLNGGGSDLIFPHHEFGAAHAEAHTG 269

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
           +   A  ++H G + L+G KMSKS GN + +++L               +RLA+L  HYR
Sbjct: 270 VHPFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLRADDV------DPNAVRLALLSGHYR 323

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-----LYNDLNTVSAI 365
               +T   L  A+  L++W +  T     D     A     L +DL+T  A+
Sbjct: 324 TDRAWTDDLLEAAQQRLARWREAVTLDAGPDATETVANLRAHLADDLDTPRAL 376


>gi|187631650|sp|Q4A786|SYC_MYCH7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|144575567|gb|AAZ54003.2| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 406

 Score =  188 bits (477), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/323 (37%), Positives = 178/323 (55%), Gaps = 27/323 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 6   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLK--NKGFSINFLHNITDIDDKII 63

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++    + I++A   +T K T ++ K         PT   R T  I ++I  I+ + 
Sbjct: 64  EKAQE----LGISEA--ELTEKYTNEYFKILEIFNIKKPTKIVRVTEKIEKIIEYIKLLE 117

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA--DFILWKRS 197
             G   Y  NN+++FD   IPNYG  S +KI+       + +K  KK  +  DF+LWK+ 
Sbjct: 118 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIES------LLDKNTKKTKSNNDFVLWKK- 170

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           T     ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ     
Sbjct: 171 TQKGLFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALT 230

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                A  W  +GF+NL G+KM+KS      +N +L  K F  +  P  +IR   L  + 
Sbjct: 231 G-NPIAENWFRSGFVNLNGKKMAKS------LNNVLLAKDFSHKYNP-DIIRSIFLSINP 282

Query: 317 REPIDFTVQRLTEAEILLSKWPQ 339
             PI+ T + +   + L+ K+ +
Sbjct: 283 TVPINLTEELIKNHKKLIEKYQK 305


>gi|296393640|ref|YP_003658524.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Segniliparus rotundus DSM 44985]
 gi|310947218|sp|D6ZFG9|MSHC_SEGRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296180787|gb|ADG97693.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Segniliparus rotundus DSM 44985]
          Length = 420

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 200/397 (50%), Gaps = 41/397 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++++++ +R I   + + P     MYVCG T YD  H+G+A   + FD+++RL  +   
Sbjct: 18  RLRLWDSADRII---RPVTPGRTATMYVCGITPYDATHLGHAATYLAFDLVHRL--WLDA 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y +NITD+DD ++ERA ++H           + ++  + F  D + L  L P   
Sbjct: 73  GHQVAYAQNITDVDDPLLERADRDHRDW------QELAAEQIELFRTDMSALRVLPPHEY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIF-------DTSSIPNYGSFSRRKIDE 172
              T  +  ++ +++ ++ +  AY   E     ++       D   +  YG     ++  
Sbjct: 127 VGVTESVGLVVAMVEKLLANQSAYVVAEGEYPDVYHRIAATEDFGYVSGYGREEMAQVFR 186

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           ++ G   P++  K +P D +LW+ + P EP W SP+G GRPGWH+ECSA++   +G  FD
Sbjct: 187 ERGGD--PDRPGKADPLDALLWRAARPGEPSWPSPFGPGRPGWHVECSAIALDRIGFGFD 244

Query: 233 IHGGGLDLIFPHHE------NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           + GGG DL+FPHHE           +  AD   + A  ++H G + L+G KMSKS GN +
Sbjct: 245 VQGGGSDLVFPHHEFSAAHAQAQHGAGAADEHRRFARNYVHAGMIGLDGEKMSKSLGNLV 304

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKG 345
            ++ L E      R      IRLA+   HYR    +    L EA+  L++W   ++ + G
Sbjct: 305 FVSALRE------RGVDPSAIRLALFAGHYRADRSWDQGLLREAQERLARWRHAASLASG 358

Query: 346 IIDPAVLSA----LYNDLNTVSAIQALHKLARESTKN 378
                V++     L NDL+T  A+ AL   + E+  +
Sbjct: 359 PAAHDVVARMREHLANDLDTPKALAALDSWSLEAAAH 395


>gi|15827673|ref|NP_301936.1| cysteinyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230150|ref|YP_002503566.1| cysteinyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|310947197|sp|B8ZRD9|MSHC_MYCLB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|13093224|emb|CAC31683.1| cysteinyl-tRNA synthase [Mycobacterium leprae]
 gi|219933257|emb|CAR71397.1| cysteinyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 384

 Score =  187 bits (475), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/388 (32%), Positives = 189/388 (48%), Gaps = 35/388 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD+++RL      E  V YV+N+TD+DD + ERA +  
Sbjct: 13  MYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGHE--VHYVQNVTDVDDPLFERADRN- 69

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   D    +  +    F  D   L  L P     AT  I +++ L+  +++ G AY 
Sbjct: 70  -GVDWRD----LAEREVALFRDDMASLRILPPHDYVAATETIVEIVELVDKMLVSGAAYV 124

Query: 148 ANNE---IIFDTSSIPNYGSFSRRKID------EQKMGTRVPEKYHKKNPADFILWKRST 198
            ++E   I F   +   +G  S    D      EQ  G   P +  K    D +LW+ + 
Sbjct: 125 IDDEYPDIYFRADATLQFGYESGYDRDTMLRLYEQSGGD--PRRPGKNGELDALLWRAAR 182

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C    
Sbjct: 183 PGEPSWSSPFGPGRPGWHVECAAIALSRIGIGLDIQGGGSDLIFPHHEFTAAHAECVRGE 242

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
            + A  ++H G +  +  KMSKS GN + ++ L           P   IRL +L  HYR 
Sbjct: 243 RRFARHYVHAGMIGWDEHKMSKSRGNLVLVSTLRAQGA------PPSAIRLGLLAGHYRA 296

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSALYNDLNTVSAIQALHKLAR 373
              ++ Q L +A   L +W   ++     D A     V   L +DL+T  AI AL     
Sbjct: 297 DRFWSSQLLDDAIARLHRWRTAASMPAGPDVADVIARVRGYLADDLDTPKAIAALDGWVT 356

Query: 374 ESTK--NHD-LLPIFNASA--HILGIEV 396
           ++ +   HD   P   A+A   +LG+++
Sbjct: 357 DALEYGGHDAAAPKLLATAIDALLGVDL 384


>gi|240171407|ref|ZP_04750066.1| cysteinyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 383

 Score =  187 bits (474), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/393 (32%), Positives = 192/393 (48%), Gaps = 42/393 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD+++RL  +      V YV+N+TD+DD + ERA +  
Sbjct: 9   MYVCGITPYDATHLGHAATYLAFDLIHRL--WLDLGHDVQYVQNVTDVDDPLFERADR-- 64

Query: 88  PSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 D +    +  +  + F  D   L  L P     AT  + +M+ LI+ ++  G A
Sbjct: 65  ------DGVDWRELADREVKLFRADMEALRVLPPHDYVAATEAVAEMVELIEKMLASGAA 118

Query: 146 YEANNEI------IFDTSSIPNYGSFSRRKID------EQKMGTRVPEKYHKKNPADFIL 193
           Y  + EI       +   +   +G  S    D      EQ+ G   P +  K +  D +L
Sbjct: 119 YTVDPEIGDYPDIYYRADATVQFGYESGCDRDTMLTLFEQRGGD--PSRPGKTDQLDALL 176

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W+ +   EP W SP+G GRPGWH+EC+A++   +    DI GGG DLIFPHHE   A + 
Sbjct: 177 WRAARAGEPSWPSPFGPGRPGWHVECAAIALSRINSGLDIQGGGSDLIFPHHEFTAAHAE 236

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           C     + A  ++H G +  +G KMSKS GN + ++ L        +      +RL +L 
Sbjct: 237 CVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTLR------AQGVEPSAVRLGLLA 290

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-----LYNDLNTVSAIQAL 368
            HYRE   +T Q L EA   L +W   +      D A + A     L +DL+T  AI AL
Sbjct: 291 GHYREDRFWTHQVLDEAAGRLQRWRTATALPAGPDAADVIARVRRYLADDLDTPKAIAAL 350

Query: 369 HKLARESTK--NHD-LLPIFNASA--HILGIEV 396
              A ++ +   HD   P   A+A   +LG+++
Sbjct: 351 DGWATDALEYGGHDESAPTSVATAIDALLGVDL 383


>gi|72080968|ref|YP_288026.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 401

 Score =  186 bits (473), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 119/323 (36%), Positives = 178/323 (55%), Gaps = 27/323 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           ++  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 1   MNKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLK--NKGFSINFLHNITDIDDKII 58

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++    + I++A   +T K T ++ K         PT   R T  I ++I  I+ + 
Sbjct: 59  EKAQE----LGISEA--ELTEKYTNEYFKILEIFNIKKPTKIVRVTEKIEKIIEYIKLLE 112

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA--DFILWKRS 197
             G   Y  NN+++FD   IPNYG  S +KI+       + +K  KK  +  DF+LWK+ 
Sbjct: 113 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIES------LLDKNTKKTKSNNDFVLWKK- 165

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           T     ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ     
Sbjct: 166 TQKGLFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALT 225

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                A  W  +GF+NL G+KM+KS      +N +L  K F  +  P  +IR   L  + 
Sbjct: 226 G-NPIAENWFRSGFVNLNGKKMAKS------LNNVLLAKDFSHKYNP-DIIRSIFLSINP 277

Query: 317 REPIDFTVQRLTEAEILLSKWPQ 339
             PI+ T + +   + L+ K+ +
Sbjct: 278 TVPINLTEELIKNHKKLIEKYQK 300


>gi|50550761|ref|XP_502853.1| YALI0D15268p [Yarrowia lipolytica]
 gi|49648721|emb|CAG81041.1| YALI0D15268p [Yarrowia lipolytica]
          Length = 743

 Score =  186 bits (472), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 146/243 (60%), Gaps = 18/243 (7%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSF 165
           +F KD  +L  LAP+   R + ++P+++  ++ II +G+AY +++ + FDT++      +
Sbjct: 224 EFDKDMAKLNVLAPSVTTRVSEYVPEIVEYVEKIIDNGYAYVSDSGVYFDTAAFDKSHDY 283

Query: 166 SRRK---------IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
           ++ +         IDE +    +  K  K+N +DF LWK S P EP W+SPWG+GRPGWH
Sbjct: 284 AKLQPWNKGHADLIDEGE--GSLSNKTGKRNSSDFALWKASKPGEPFWDSPWGQGRPGWH 341

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L++EG+
Sbjct: 342 IECSVMASAILGPQMDIHSGGIDLAFPHHDNELAQSEAHYDCKQWVNYFLHTGHLHIEGQ 401

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS  NFITI+E L+T       +    +RLA  +  +   +DF    ++E + + S 
Sbjct: 402 KMSKSLKNFITIDEALQT-------YSPRQLRLAFALQQWNNQLDFKSALISEVKSVEST 454

Query: 337 WPQ 339
           + +
Sbjct: 455 FSK 457



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +K+YN+L R  T F  I  + +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 20  RDTLKLYNSLTRSKTAFVPIAGNKVTWYCCGPTVYDSSHMGHARNYVSTDINRRILQDYF 79

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V +V+N+TDIDDKII R RQ+H
Sbjct: 80  GYD-VLFVQNVTDIDDKIIIRGRQQH 104


>gi|67468752|ref|XP_650386.1| cysteinyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56467004|gb|EAL45000.1| cysteinyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 701

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/284 (38%), Positives = 152/284 (53%), Gaps = 11/284 (3%)

Query: 50  FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE-RARQEHPSIPINDAISIITSKNTQQFV 108
           ++ ++  L  + G+        +TD+  K ++ R ++    I + +A  I   K  + F 
Sbjct: 139 YEKVFPTLDSFNGQNTAEVFARMTDVIGKYLDVRQKETVDPIEMKEAARIHARKYEELFF 198

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
            D   L    P    R T  IP++I  IQ II +G+AYE+N  + FDT+S    G  +  
Sbjct: 199 ADCDALGIRRPDVISRVTEFIPEVIAFIQKIIDNGYAYESNGSVYFDTASFRKAG-MTYG 257

Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           +++   +G    P    K N  DF LWK+S   EP WES WG GRPGWHIECSAM+S+  
Sbjct: 258 RLEPWSVGDVDAPADGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVF 317

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENE+AQS    ++ E     ++H G L++ G KMSKS  NFI
Sbjct: 318 GDTLDIHSGGEDLKFPHHENELAQSEAYFNKKESWVRYFLHTGHLHINGLKMSKSLKNFI 377

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           TI + LE  K+  R      +R+  LM  +   I+F+   L EA
Sbjct: 378 TIKQALE--KYSARQ-----LRILFLMQSWDAVINFSDSALDEA 414



 Score = 73.6 bits (179), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 38/86 (44%), Positives = 57/86 (66%), Gaps = 4/86 (4%)

Query: 1  MKKKIKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
          M + +K++NTL+R  +  F    P  IR Y CGPTVYD +H+G+AR  +  D+  R+L  
Sbjct: 1  MTETLKVHNTLKRDGLDNFVCNGP--IRWYCCGPTVYDDSHLGHARTYLSTDIFRRILED 58

Query: 60 YYGEKCVTYVRNITDIDDKIIERARQ 85
          Y+G + +  + NITD+DDKII +AR+
Sbjct: 59 YFGYQVIQCM-NITDVDDKIILKARK 83


>gi|111222276|ref|YP_713070.1| cysteinyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123338663|sp|Q0RLV2|MSHC_FRAAA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|111149808|emb|CAJ61502.1| Cysteinyl-tRNA synthetase 2 (Cysteine--tRNA ligase 2) [Frankia alni
           ACN14a]
          Length = 413

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 188/363 (51%), Gaps = 34/363 (9%)

Query: 18  FQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
            +A+D +    +YVCG T YD  H+G+A   + +D+  R+LR   G K V YV+N+TD+D
Sbjct: 1   MRALDSAPTAHLYVCGITPYDATHLGHAFTYLTYDLAQRVLRDS-GHK-VLYVQNVTDVD 58

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D ++ERA ++   +   D    + ++    F +D T L  LAP         IP ++ ++
Sbjct: 59  DPLLERADRD--GLDWRD----LAAREIALFREDMTALRMLAPDSYVGVVEAIPMIVDMV 112

Query: 137 QNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPAD 190
             ++  G AY  ++++ F  ++ P +G  S         I  ++ G   P +  KK+P D
Sbjct: 113 AELVDRGAAYHVDDDLYFSVAAAPAFGEISHLSRAEMLAICAERGGD--PGRGGKKDPLD 170

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
            +LW+   P EP W SP+G GRPGWHIECSA++ H+LG V D+ GGG DL FPHHE   A
Sbjct: 171 PLLWRARRPGEPSWPSPFGPGRPGWHIECSAIARHHLGGVVDLQGGGTDLSFPHHECSAA 230

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +  A      A  ++H   ++L+G KMSKS GN   ++ L        R     +  L 
Sbjct: 231 HAEVAAGARPFARSYVHTAMVSLDGHKMSKSRGNLEFVSRL--------RRAGTDLAALR 282

Query: 311 MLMTHYREPID--FTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDLNTV 362
           + +  +R   D  ++   LT+A   + +W      P    ++G++  AV   L +DL+  
Sbjct: 283 LALLDHRHTADWEWSASLLTDAVARVGRWRAAVALPAGPDAQGVL-AAVRERLADDLDAP 341

Query: 363 SAI 365
            A+
Sbjct: 342 GAL 344


>gi|90077312|dbj|BAE88336.1| unnamed protein product [Macaca fascicularis]
          Length = 451

 Score =  185 bits (469), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/267 (40%), Positives = 149/267 (55%), Gaps = 21/267 (7%)

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R T +
Sbjct: 2   VMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTEN 55

Query: 129 IPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKK 186
           IPQ+I  I+ II  GHAY  A   + FD  S  + YG      +    +G   P    K+
Sbjct: 56  IPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLV--GVVPGPVGE--PADSDKR 111

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           + +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL FPHHE
Sbjct: 112 HASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHE 171

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPA 304
           NEIAQ     + E+  N ++H+G L+++G+  KMSKS  N+ITI + L+T       +  
Sbjct: 172 NEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT-------FSP 224

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE 331
            V R   L + YR  ID++   +  A+
Sbjct: 225 DVFRFFCLRSSYRSAIDYSDSAMLHAQ 251


>gi|284991120|ref|YP_003409674.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Geodermatophilus obscurus DSM 43160]
 gi|310947184|sp|D2S6C9|MSHC_GEOOG RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|284064365|gb|ADB75303.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Geodermatophilus obscurus DSM 43160]
          Length = 422

 Score =  184 bits (468), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 126/400 (31%), Positives = 191/400 (47%), Gaps = 43/400 (10%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           +  RMYVCG T YD  H+G+A   + FD++ R+ R       V YV+N+TDIDD ++ERA
Sbjct: 36  TTARMYVCGITPYDATHLGHAATYLAFDLVNRVWRD--AGHAVHYVQNVTDIDDPLLERA 93

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
            ++       +   ++  + T  F +D T L  L P     A   +P+++  ++ ++  G
Sbjct: 94  ERD------GEDWVVLGMRETALFREDMTALRVLPPDDYVGAVESVPRIVAHVETLLDEG 147

Query: 144 HAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKM------GTRVPEKYHKKNPADFILW 194
            AY   +   ++  D +  P +GS S    DE  M          P++  K+N  D +LW
Sbjct: 148 LAYVLDDGTGDVYHDIAQAPGFGSES--GYDEATMLRFSAERGGDPDRPGKRNRLDPMLW 205

Query: 195 KRSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE-----NE 248
           +   P EP W  P G  GRPGWHIEC+ ++   +G  FD+ GGG DL+FPHHE      E
Sbjct: 206 RGRRPGEPSWPGPRGVAGRPGWHIECATIALETIGMGFDVQGGGSDLVFPHHEFSAVHAE 265

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
              +         A  ++H   + L+G KMSKS GN + ++      K  G       IR
Sbjct: 266 ALTATVTGEKLPFARAYVHAAMIGLDGEKMSKSRGNLVFVS------KLRGEGVDPMAIR 319

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSA----LYNDLNTVS 363
           LA+L  HYR    +T   L  AE  L+ W +  T   G     VL      L +DL++  
Sbjct: 320 LALLAGHYRTDRAWTPDLLAGAEQRLATWRRAVTRDAGAPAAEVLQGLRERLADDLDSPG 379

Query: 364 AIQ-----ALHKLARESTKNHDLLP--IFNASAHILGIEV 396
           AI      A   LA  + +  +  P  + +A   +LG+ +
Sbjct: 380 AIALVDAWAERTLAATADEQEEGAPTIVCDAVDALLGVAL 419


>gi|256394535|ref|YP_003116099.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|310947176|sp|C7Q9B2|MSHC_CATAD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256360761|gb|ACU74258.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Catenulispora acidiphila DSM 44928]
          Length = 427

 Score =  184 bits (466), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 118/384 (30%), Positives = 191/384 (49%), Gaps = 33/384 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +++++T  + +    A  P    R+YVCG T YD  H+G+A   + FD++ R   +  
Sbjct: 17  SAVRLHDTAAQGLVPTPAAAPGEAARIYVCGITPYDATHMGHANTYLTFDLIQRA--WLD 74

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V+YV+N+TD+DD ++ERA               +    T  F +D T L  L P H
Sbjct: 75  AGHPVSYVQNVTDVDDPLLERAAA------TGRDWEALAESETALFREDMTALRILPPQH 128

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ--KMGTRV 179
              A   IP ++ L+  ++  G AY+ + ++ F   + P +G+ +     E     G R 
Sbjct: 129 YVGAVESIPLVVDLVVKLLERGAAYDVDGDVYFSVHADPAFGAVAHLDAPEMLTTFGERG 188

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWE-------SPWGRGRPGWHIECSAMSSHYLGKV 230
             P +  KK+P D +LW+     EP WE       +    GRPGWHIEC+A++  +LG  
Sbjct: 189 GDPGRPGKKDPLDCLLWQAEREGEPSWEPGEQARAAGLKPGRPGWHIECAAIALEHLGMG 248

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            D+ GGG DL FPHHE   +++         A+ ++H+G + L+G KMSKS GN + +++
Sbjct: 249 IDLQGGGSDLAFPHHEMGASEAQVVTGQRPYAHSYVHSGMVGLDGEKMSKSKGNLVLVSK 308

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSK 344
           L    +  G    A  IRLA+L  HYR   ++T   L  A   L++W      P    + 
Sbjct: 309 L----RHAGVDPMA--IRLALLAHHYRTDWEWTDADLVSAVARLARWRAAVSRPDGVPAD 362

Query: 345 GIIDPAVLSALYNDLNTVSAIQAL 368
            ++D AV + + +DL+   A+  +
Sbjct: 363 DVLD-AVRARIADDLDAPGALAVI 385


>gi|320165586|gb|EFW42485.1| cysteinyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 727

 Score =  183 bits (464), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 135/238 (56%), Gaps = 19/238 (7%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
           +QF  D   L  L P    R +++I ++I  ++ +I +G+AY +N  + F T+S      
Sbjct: 202 EQFNIDMKALHILEPDRLTRVSDYIDEIIEFVEKVIGNGYAYASNGSVYFSTTSFDQNKG 261

Query: 165 FSRRKIDEQKMG------------TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
               K+  + +G            +       KK+P DF LWK+S   EP W+SPWG+GR
Sbjct: 262 HHYAKLVPEAVGNAASLAEGEGELSATDAGSDKKHPNDFALWKKSKAGEPAWDSPWGKGR 321

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   +G   DIHGGG+DL FPHH+NEIAQS      ++  N ++H G L 
Sbjct: 322 PGWHIECSAMAGKVIGSTLDIHGGGIDLKFPHHDNEIAQSEAFFDNKQWINYFMHTGHLA 381

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +EGRKMSKS  NFITI E LE       ++ A  IR+  L+  + + +D++   +TEA
Sbjct: 382 IEGRKMSKSLKNFITIREALE-------AYTARQIRIMFLLHAWNKGLDYSKSTMTEA 432



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  ++++N+L R++ EF   + + +  Y+CGPTVYD +H+G+A   I FDV+ R+L  Y
Sbjct: 18  VRTGLRLHNSLTREVDEFIPANGNTVNAYICGPTVYDASHMGHASTYIQFDVIRRVLADY 77

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEH 87
           +    + +V NITD+DDKII +AR+ H
Sbjct: 78  F-HYDMRWVMNITDVDDKIILKARRNH 103


>gi|319442059|ref|ZP_07991215.1| cysteinyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 430

 Score =  183 bits (464), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/356 (31%), Positives = 180/356 (50%), Gaps = 34/356 (9%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
             + +YVCG T YD  H+G+A   + FD+++R L    G + V +V NITD+DD + ERA
Sbjct: 39  GEVGIYVCGITPYDSTHLGHAATYVTFDLVHRAL-LDNGHR-VHFVENITDVDDPLFERA 96

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
             E   +   D    + +     F  D   L+ + P     A   + ++I L+  ++  G
Sbjct: 97  --ERDGVDWRD----LGTSQIDLFRSDMEALSVIPPREYIGAMESVDEVIDLVSRLLEVG 150

Query: 144 HAYEANNE----IIFDTSSIPNYGSFSRRKIDE------QKMGTRVPEKYHKKNPADFIL 193
            AY  + +    I  D +    +G  SR   DE      ++ G   P++  K+ P D ++
Sbjct: 151 AAYRLDGDEFPDIYVDHTFTEQFGYESRYTADEMAEFFAERGGD--PDRAGKRYPLDALV 208

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W+     EP W++P+G GRPGWH+ECSA++++ LG  F + GGG DL FPHHE   A + 
Sbjct: 209 WRARRDGEPSWDAPFGAGRPGWHVECSAIATNRLGASFAVQGGGSDLRFPHHEFSAAHAE 268

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A   ++ A+ ++H G + L+G KMSKS GN + +++L            A  +RL +  
Sbjct: 269 AAHGCDRMADHYVHTGMIGLDGVKMSKSLGNLVFVSKLTADGH------DASAVRLGLYE 322

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------IDPAVLSALYNDLNT 361
            HYR   D++   L  AE  L++W   + +           +   V +AL +DL+T
Sbjct: 323 QHYRADRDWSDAVLARAEDRLARWRAAAQTAASRPASAAAQLVADVRAALSDDLDT 378


>gi|187631651|sp|Q4A947|SYC_MYCHJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|144227739|gb|AAZ44724.2| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 406

 Score =  183 bits (464), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/321 (36%), Positives = 174/321 (54%), Gaps = 23/321 (7%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 6   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLK--NKGFSINFLHNITDIDDKII 63

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++    + I++A   +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 64  EKAQE----LGISEA--ELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 117

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK+ T 
Sbjct: 118 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIE----SLLDKNTKKTKSKNDFVLWKK-TQ 172

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 173 KGLFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 231

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS      +N +L  K F  +  P  +IR   L  +   
Sbjct: 232 NPIAENWFRSGFVNLNGKKMAKS------LNNVLLAKNFSHKYNP-DIIRSIFLSINPTV 284

Query: 319 PIDFTVQRLTEAEILLSKWPQ 339
           PI+ T + +   + L+ K+ +
Sbjct: 285 PINLTEELIKNHKKLIEKYQK 305


>gi|281205872|gb|EFA80061.1| cysteinyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 837

 Score =  183 bits (464), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 132/419 (31%), Positives = 190/419 (45%), Gaps = 87/419 (20%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I  Y CGPTVYD AH+G+AR  +  D++ R+L  Y+    + +V  +TD+DDKII+ +  
Sbjct: 83  ISWYTCGPTVYDSAHLGHARAYVSIDIVQRVLTDYFNLN-INHVMGMTDVDDKIIKMSAT 141

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           +  S         +  +   +F++D   L    P    R + HIP +I  ++ I  +G+A
Sbjct: 142 KGMSF------KELARQKELEFIQDMDSLNVRPPLLITRVSEHIPNIINFVKQIRENGYA 195

Query: 146 YEAN------NEIIFDTSSIPNYGSFSRR--KIDEQKMGTRVPEKYH-----KKNPADFI 192
           Y+ +        ++FDT      G F  R  K++++  G +  E        K    DF 
Sbjct: 196 YDVDIPGSTGQSVLFDT------GKFGTRYGKLEKENQGAQADENLAIQSDVKLGTRDFA 249

Query: 193 LWKRSTPMEPG--------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           LWK + P+           W SP+G GRPGWHIECS+M     G   D+H GG+DL FPH
Sbjct: 250 LWKSANPITDVDGQGKLVVWNSPFGDGRPGWHIECSSMIHSIFGDKLDVHAGGIDLKFPH 309

Query: 245 HENEIAQSCCA----------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           HENEIAQ C A             ++  N ++H G LN++G KMSKS  NFITI E L  
Sbjct: 310 HENEIAQ-CEAHFSPHPNPATGEYKQWVNYFMHIGHLNIKGLKMSKSLKNFITIREYLAK 368

Query: 295 KKFGGRSWPAPVIR-------------------------LAMLMTHYREPIDFTVQRLTE 329
                  W     R                           M+     EPI+  + R + 
Sbjct: 369 NTATSFRWLCLTNRYFDTINYNPKSDEQYQNSLQRFIDWFNMVEMRMMEPININLTRASY 428

Query: 330 AEILLSKWPQTSTSKGIIDPAVLS------ALYNDLNTVSAIQALHKLARESTKNHDLL 382
            +           +K IID   LS      AL +D NT  AI+ +  L +E+  N+  L
Sbjct: 429 QQ-----------AKPIIDLFNLSKNDIHLALTDDFNTPKAIKIMQLLVKETMMNNTQL 476


>gi|145594700|ref|YP_001158997.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|310947216|sp|A4X6W9|MSHC_SALTO RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|145304037|gb|ABP54619.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 404

 Score =  182 bits (463), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 181/353 (51%), Gaps = 31/353 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A  MI FD++ R+ R    +  VTYV+N+TDIDD ++ERA ++ 
Sbjct: 32  MYVCGITPYDATHLGHAATMITFDLIQRVWRDAGLD--VTYVQNVTDIDDPLLERAARD- 88

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 +   ++  + T  F +D   L  + P H   A   IP +   +  ++  G AY 
Sbjct: 89  -----GEDWKVLAMRETALFREDMEALRIIPPEHYVGAVESIPDIAERVLMLVKEGAAYR 143

Query: 147 --EANNEIIFDTSSIPNYG---SFSRRKIDE---QKMGTRVPEKYHKKNPADFILWKRST 198
             +   ++ FD S+ P +G     SR ++ E   ++ G   P++  K++P D +LW+ + 
Sbjct: 144 LEDGTGDVYFDISATPRFGYESHLSREQMLEIFPERGGD--PDRAGKRDPLDPLLWRGAR 201

Query: 199 PMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W     G GRPGWHIEC+ ++ + LG   D+ GGG DLIFPHHE   A +     
Sbjct: 202 ADEPSWPGGDLGPGRPGWHIECAVIALNLLGAQIDVQGGGNDLIFPHHECSAAHAELLTG 261

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A  ++H G + L+G KMSKS GN + ++ L   +           +RLA++  HY 
Sbjct: 262 QTPFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRADQV------DPMAVRLALMSGHYH 315

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK-GIIDPAVLSA----LYNDLNTVSAI 365
               +  + L  A+  L +W + +    G    A L+A    L +DL++  A+
Sbjct: 316 SDRSWNDELLATAQKRLGRWRKAAAMPCGPSAEAFLAALRGRLADDLDSPGAL 368


>gi|312601583|gb|ADQ90838.1| Cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 404

 Score =  182 bits (462), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/321 (36%), Positives = 174/321 (54%), Gaps = 23/321 (7%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 4   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLK--NKGFSINFLHNITDIDDKII 61

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++    + I++A   +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 62  EKAQE----LGISEA--ELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 115

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK+ T 
Sbjct: 116 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIE----SLLDKNTKKTKSKKDFVLWKK-TQ 170

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 171 KGLFFKSFFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 229

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS      +N +L  K F  +  P  +IR   L  +   
Sbjct: 230 NPIAENWFRSGFVNLNGKKMAKS------LNNVLLAKDFSHKYNP-DIIRSIFLSINPTV 282

Query: 319 PIDFTVQRLTEAEILLSKWPQ 339
           PI+ T + +   + L+ K+ +
Sbjct: 283 PINLTEELIKNHKKLIEKYQK 303


>gi|54020642|ref|YP_116169.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|61216154|sp|Q5ZZP6|SYC_MYCH2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53987815|gb|AAV28016.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 404

 Score =  182 bits (462), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/321 (36%), Positives = 174/321 (54%), Gaps = 23/321 (7%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 4   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLK--NKGFSINFLHNITDIDDKII 61

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++    + I++A   +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 62  EKAQE----LGISEA--ELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 115

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK+ T 
Sbjct: 116 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIE----SLLDKNTKKTKSKNDFVLWKK-TQ 170

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 171 KGLFFKSFFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 229

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS      +N +L  K F  +  P  +IR   L  +   
Sbjct: 230 NPIAENWFRSGFVNLNGKKMAKS------LNNVLLAKDFSHKYNP-DIIRSIFLSINPTV 282

Query: 319 PIDFTVQRLTEAEILLSKWPQ 339
           PI+ T + +   + L+ K+ +
Sbjct: 283 PINLTEELIKNHKKLIEKYQK 303


>gi|260948980|ref|XP_002618787.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
 gi|238848659|gb|EEQ38123.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
          Length = 762

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/276 (38%), Positives = 152/276 (55%), Gaps = 26/276 (9%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN---- 161
           F +D  +L  L PT   R + ++P++I  +  II +G AY  A+  + FDT+   N    
Sbjct: 235 FNEDMAKLNVLPPTVTTRVSEYVPEIIDFVDKIISNGFAYVTADGSVYFDTAKFENDPNH 294

Query: 162 -------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
                  +   S   I++ +    V E   KKNPADF LWK S P EP W+S WG GRPG
Sbjct: 295 DYAKLQPWNKGSMSLINDGEGSLSVSESIIKKNPADFSLWKASKPGEPAWDSKWGPGRPG 354

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L+++
Sbjct: 355 WHIECSVMASDILGSTIDIHSGGIDLCFPHHDNELAQSEAYFDNKQWINYFMHNGHLHIQ 414

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G+KMSKS  NFITI E L+       ++ +  +RL     ++ +PIDF    + E +   
Sbjct: 415 GQKMSKSLKNFITIEEALQ-------NYTSRQLRLIFAFGNWDKPIDFKDSLVHEVKAY- 466

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
               ++S SK       L+  Y   ++VS+ QA+ K
Sbjct: 467 ----ESSLSKFFTTVRALNTDYK--HSVSSGQAISK 496



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R   +F     + I  Y CGPTVY++AH+G+AR  +  D+  R+L+ Y+G  
Sbjct: 31  LKIYNSLTRAKEDFVPQKFNYITWYCCGPTVYNYAHMGHARNYVCSDICRRILQDYFGYN 90

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            + +V+N+TDIDDKII  ARQ++
Sbjct: 91  -INFVQNVTDIDDKIIISARQQY 112


>gi|303286934|ref|XP_003062756.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455392|gb|EEH52695.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 724

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 91/247 (36%), Positives = 135/247 (54%), Gaps = 19/247 (7%)

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
           S  I DA   +  +   +F+ D   L  + P    R + ++ +++  IQ I+  G AYE+
Sbjct: 160 SWSIQDAYLTLAKRFEDEFMGDMASLNVMRPDALTRVSEYVDKIVSYIQRIVDRGFAYES 219

Query: 149 NNEIIFDTSSIPN-----YGSFSRRKIDEQKM-------GTRVPEKYHKKNPADFILWKR 196
           N  + FD  +        Y   ++  + E ++       G    +   KK+  DF+LWK 
Sbjct: 220 NGSVYFDVPTFEKDANHKYAKLNKAALAEDEVEAAMDGEGALAADASEKKDAHDFVLWKA 279

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           S P EP W SPWG GRPGWHIECSAM S  LG+  DI+GGG+DL FPHHEN++AQS    
Sbjct: 280 SKPGEPSWASPWGEGRPGWHIECSAMCSDVLGEAVDINGGGIDLNFPHHENQLAQSEAFY 339

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +++  N ++H+G L+++G KMSKS  NFITI   L       + + A  +R   L+  +
Sbjct: 340 DVKQWVNYFVHSGHLHIDGLKMSKSLKNFITIRAAL-------KMYTARQLRFLFLLHQW 392

Query: 317 REPIDFT 323
            +P+D T
Sbjct: 393 SDPMDLT 399



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 1/80 (1%)

Query: 6  KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
          ++ NT  +  T F  +D + +  Y+CGPTVYD AH+G+AR  + FDVL R++  Y+    
Sbjct: 11 RLMNTFTKTKTPFVPLDGNRVGWYICGPTVYDSAHMGHARNYVNFDVLRRVVTEYF-RYD 69

Query: 66 VTYVRNITDIDDKIIERARQ 85
          V +V N+TDIDDKI+ RA Q
Sbjct: 70 VRFVMNVTDIDDKIVMRAHQ 89


>gi|71893989|ref|YP_279435.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 401

 Score =  181 bits (460), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/321 (36%), Positives = 174/321 (54%), Gaps = 23/321 (7%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           ++  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 1   MNKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLK--NKGFSINFLHNITDIDDKII 58

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++    + I++A   +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 59  EKAQE----LGISEA--ELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 112

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK+ T 
Sbjct: 113 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIE----SLLDKNTKKTKSKNDFVLWKK-TQ 167

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 168 KGLFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 226

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS      +N +L  K F  +  P  +IR   L  +   
Sbjct: 227 NPIAENWFRSGFVNLNGKKMAKS------LNNVLLAKNFSHKYNP-DIIRSIFLSINPTV 279

Query: 319 PIDFTVQRLTEAEILLSKWPQ 339
           PI+ T + +   + L+ K+ +
Sbjct: 280 PINLTEELIKNHKKLIEKYQK 300


>gi|331698452|ref|YP_004334691.1| Cysteine--tRNA ligase [Pseudonocardia dioxanivorans CB1190]
 gi|326953141|gb|AEA26838.1| Cysteine--tRNA ligase [Pseudonocardia dioxanivorans CB1190]
          Length = 365

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 166/343 (48%), Gaps = 19/343 (5%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           RMYVCG T YD  H+G+A   +  DV  R+LR+   +  V   RN+TD+DD +      +
Sbjct: 16  RMYVCGITPYDTTHLGHAATFVWADVAARVLRHVGVD--VDVCRNVTDVDDVL------D 67

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
             +           +    +F +D   L    PT++PRA  H+ Q++ L + ++  G AY
Sbjct: 68  AAAARAGARYDSFAAVQQFRFERDMAALGVRRPTYEPRAHVHVAQVVELAEALLERGAAY 127

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
             +  + F  + +      +  +               + +PAD ++W+ +   EP W S
Sbjct: 128 HRDGTVWFRGAGVRERAGLAADEAAALADEFGDRRDDGRDDPADVVIWRVAGHGEPAWPS 187

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWH EC+AMS   LG   D+H GG DL +PHH  E A +     +   A  W+
Sbjct: 188 PWGEGRPGWHAECAAMSLTTLGPALDLHVGGADLRYPHHAYEAAMAEAVTGVTPFARAWL 247

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G + ++GRKM+KS GN + ++++L  +       PA  +RL ++   + +  D+  + 
Sbjct: 248 HVGTVRIDGRKMAKSAGNLVLVSDVLADR-------PAAALRLLLVDRPWAQTWDYRDED 300

Query: 327 L----TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
           L    T  E L +      T   +    V +AL +DL+   A+
Sbjct: 301 LRAAETRLEALYAAASHGVTENPVASAEVTAALLDDLDVPRAL 343


>gi|294811722|ref|ZP_06770365.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440529|ref|ZP_08215263.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324321|gb|EFG05964.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 409

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/318 (34%), Positives = 170/318 (53%), Gaps = 23/318 (7%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T YD  H+G+A     FD++ R+  +   ++ V YV+N+TD+DD ++ERA ++
Sbjct: 39  RIYVCGITPYDATHLGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDDPLLERALRD 96

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +  + +  + T  F +D T L  L P H   A   IP+++ L++ ++  G AY
Sbjct: 97  ------GEDWTRLAERETALFREDMTALRMLPPKHYIGAVEAIPRIVPLVERLLGAGAAY 150

Query: 147 EANNEIIFDTSSIPNYGSFSR------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
           E + +I F   S P++G  S       R +  ++ G   PE+  KKNP D +LW  +   
Sbjct: 151 ELDGDIYFSVESDPHFGEVSHLDAAAMRLLSAERGGD--PERPGKKNPLDPMLWLAARSG 208

Query: 201 EPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           EP W+          WHIEC A++  +LG  FD+ GGG DL+FPHHE   + +       
Sbjct: 209 EPSWDGGGLGPGRPGWHIECVAIALDHLGMGFDVQGGGSDLVFPHHEMGASHAQVLTGEH 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  ++H G + L G KMSKS GN + ++ L   ++ G    PA  IRLA+L  HYR  
Sbjct: 269 PFAQAYVHAGMVALHGEKMSKSRGNLVFVSAL---RRDGVD--PA-AIRLALLAHHYRAD 322

Query: 320 IDFTVQRLTEAEILLSKW 337
            ++T   L EA   L++W
Sbjct: 323 WEWTDGVLQEAVERLARW 340


>gi|224369768|ref|YP_002603932.1| CysS3 [Desulfobacterium autotrophicum HRM2]
 gi|223692485|gb|ACN15768.1| CysS3 [Desulfobacterium autotrophicum HRM2]
          Length = 759

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 135/476 (28%), Positives = 224/476 (47%), Gaps = 54/476 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R    F+      + +Y CGPTV+        R  +  D+L R L Y     
Sbjct: 303 LTLYNTLTRSQERFEPKAQGKVAVYTCGPTVHKAMDPTRFRRFVATDLLVRYLEYR--GL 360

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DD+ I+ + +   ++P        T  + + F KD TRL        P 
Sbjct: 361 TVNHVVNITDLDDRTIKGSERMDMTVPE------FTRPHIRSFKKDLTRLGVRPAQAYPL 414

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
            + HI  M+ + + ++  G AYE  N +  D SS+  YGS S   +D+ ++G  V  + Y
Sbjct: 415 VSEHIEDMVAVAERLVEQGVAYEKLNSLYCDISSLEGYGSLSGVNLDKIRVGATVDLDDY 474

Query: 184 HKKNPADFILWKRS--TPMEPGW--ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L KR   + ++ G    + WG  RP  H++C+A++  Y G  FDIH G  +
Sbjct: 475 EKDNPRDFTLLKRVGLSELKRGVCVRTKWGNVRPSLHLQCAALAMKYHGGGFDIHTGSRE 534

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE A S    + E  A IW+H   +  +G    ++ G      +LLE  K G 
Sbjct: 535 LLFPHHENENAMSRALVK-EPLARIWVHCDCVTYDGSLGVETLGEVDL--DLLE--KLG- 588

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------- 343
             W   V+R  +L  HYR+P+ F+ Q L +A   L ++ +   S                
Sbjct: 589 --WEPRVVRFFLLSCHYRKPLTFSSQGLIDAGRALDRFDRCIESLSQVREGEPFPGMDQL 646

Query: 344 -----KGIID--------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
                 G I           V++ L+  + T++ + A H++  ++    ++L +F     
Sbjct: 647 LYDIRNGFISSMDDDLKISGVMAVLFKGVKTLNRLIACHQI--DARGAREVLALFREING 704

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +L I   +    K++S     L+++R       +++ AD +R+++++ G  + D K
Sbjct: 705 VLNI--FEFEPGKSVSHEAAALIEKREAARLSGQWTLADRLRQEIKALGVEINDKK 758


>gi|256832427|ref|YP_003161154.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Jonesia denitrificans DSM 20603]
 gi|310947186|sp|C7R3Z4|MSHC_JONDD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256685958|gb|ACV08851.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Jonesia denitrificans DSM 20603]
          Length = 423

 Score =  181 bits (458), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 131/422 (31%), Positives = 194/422 (45%), Gaps = 45/422 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++ +T   ++ E          MYVCG T YD  HIG+A   I FD+LYR   +    
Sbjct: 18  SVRVMDTSSGQLVETVRPGVGESSMYVCGITPYDATHIGHAATYIAFDLLYRA--WLDAG 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V Y  N+TD+DD ++ERA          D   + TS+ T  F  D + L  L P    
Sbjct: 76  QRVVYTSNVTDVDDPLLERATATG-----VDWTELATSQITL-FFDDMSALGVLPPHTYL 129

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPNYGSFS----- 166
            A   +P +I   ++++  G AY                +I  D +S P++GS S     
Sbjct: 130 SAVESVPMVISATRHLLESGRAYRVPVPAQERPVHSPAYDIYADVTSDPDFGSISGYTSE 189

Query: 167 -RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSS 224
            R ++   + G   P    KKNP D I+WK     EPGW+    G GRPGWHIEC+ ++ 
Sbjct: 190 ERVRLFTDRGGD--PATPGKKNPIDPIMWKAQREGEPGWDGDDLGWGRPGWHIECTTIAH 247

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             +G+   + GGG DLIFPHHE   A +      +  A++  H G +  +G KMSKS GN
Sbjct: 248 CGIGRSCTVQGGGSDLIFPHHEMSSAHARALFGQDAGASVHAHAGLIAYQGEKMSKSKGN 307

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
            + ++ L +             IRLA+L  HYR+  ++T   L         W Q  ++ 
Sbjct: 308 LVFVSRLRQEGV------DPMAIRLAILANHYRDEWEWTSDVLDAGIKRHQLWLQAMSTN 361

Query: 345 GIIDP-----AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI 394
           G   P     A+  AL NDL+   A+ A+   A  +   +D  P     +  A   +LGI
Sbjct: 362 GGPHPGATLAAMREALSNDLDAPRALDAVDAWAYATLAGNDEDPGAPGVVSRAVNALLGI 421

Query: 395 EV 396
            +
Sbjct: 422 RL 423


>gi|300934462|ref|ZP_07149718.1| cysteinyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 438

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 178/348 (51%), Gaps = 33/348 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +Y+T + +I    +I P+   I MYVCG T YD  H+G+A   + FD++ R L    
Sbjct: 18  ELCLYDTADDQIRPV-SIPPAGKEIGMYVCGITPYDSTHLGHAATYLTFDLINRYL--VA 74

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQ--QFVKDTTRLACLAP 119
               V YV+NITD+DD + ERA +        D +      ++Q   F  D   L  + P
Sbjct: 75  AGHQVHYVQNITDVDDPLFERAER--------DGVDWRELGDSQIDLFRSDMEALQVIPP 126

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRRKIDEQKM 175
                A   + +++ ++  ++  G AY+ +++    I  D +    +G  SR   D   M
Sbjct: 127 RDYIGAIESVGEVVEMVGRLLEVGAAYQLSDDEFADIYADHTFTKQFGYESR--YDASTM 184

Query: 176 GTRV------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
                     PE+  K++P D +LW+     EP W++P+G GRPGWHIECSA++++ LG 
Sbjct: 185 AELFAERGGDPERPGKRHPMDALLWRAHREGEPQWDAPFGAGRPGWHIECSAIATNRLGP 244

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            F I GGG DL FPHHE   A +  A   E+ A+ ++H G + L+G KMSKS GN + ++
Sbjct: 245 QFSIQGGGSDLRFPHHEFSAAHAEAAHGCERMADHYVHAGMIALDGVKMSKSLGNLVFVS 304

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           +L               IRL +  +HYR   D++ + L  AE  L  W
Sbjct: 305 KLTAAGH------EPSAIRLGVYASHYRTDRDWSDEVLATAEQRLRLW 346


>gi|319777676|ref|YP_004137327.1| cysteinyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|238810260|dbj|BAH70050.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|318038751|gb|ADV34950.1| Cysteinyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 411

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 212/429 (49%), Gaps = 36/429 (8%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN  P++ FD++ +  R   GEK  T+V NITDIDDKII RAR+
Sbjct: 2   LKIYVCGPTVYNDLHIGNMVPILTFDLMLKA-RRVLGEK-FTFVHNITDIDDKIINRARE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 +N +   ++ K T+ ++K    L     +H  + T+++  +I  +   + + +A
Sbjct: 60  ------LNISEKELSQKYTKDYLKLLKTLDVDTISHLEKVTDNMGLIIEYVNKQVKNNNA 113

Query: 146 Y-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +    + FD     N YG  +   +D+        +  +KK  ADF LWK+ T +   
Sbjct: 114 YIDQEGNVWFDVKKFENHYGQVANLNLDKMIFE---EQNNNKKFEADFALWKK-TNVGIQ 169

Query: 204 WESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           ++SP+ +GRPGWH EC+ + + H+  K  DIHGGG+DL FPHHENE  Q       + T 
Sbjct: 170 FDSPFSKGRPGWHTECAVLINKHFKNKGLDIHGGGMDLTFPHHENENIQHFALYNQDITK 229

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G +N EG KMSKS GN I   + L       +     +++L +L +    PI+ 
Sbjct: 230 E-WIRCGQINYEGEKMSKSLGNVILAKDFL-------KEHDREILKLIILSSKISAPINV 281

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL- 381
           T + +    ++L+K+ +      I    +  +  N       I    K+   S  N+ L 
Sbjct: 282 TNELIENMYVILNKYKKLIFKFFINFKNIDKSKINKNEEFIKIMNSLKIGDFSDFNYLLN 341

Query: 382 --LPIFNASAHILGIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADY 430
             +  FN + +I   E+    L           N + A E   Q R  + K K++  AD 
Sbjct: 342 EQIKEFNKTKNIKNAEIIFNTLKVIHPQLTIKANYNKAFELFDQWRCFIDK-KEYKQADK 400

Query: 431 IRKQLESKG 439
           IRK+L   G
Sbjct: 401 IRKKLMKLG 409


>gi|302698421|ref|XP_003038889.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
 gi|300112586|gb|EFJ03987.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
          Length = 768

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 12/231 (5%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSF 165
           +F  D  RL    P    R T ++P+++  +Q +I +G+AYE+   + FDT +     + 
Sbjct: 244 RFFDDMARLRVRRPDTVTRVTEYVPEIVAFVQKVIDNGYAYESAGSVYFDTQAFDAAPNH 303

Query: 166 SRRKIDEQKMGTRVPE----KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSA 221
              K++    G R  +       +++ +DF LWK S P EP WESPWG GRPGWHIECS 
Sbjct: 304 FYAKLEPYSKGNREDDGGSRAAGQRSASDFALWKASKPGEPYWESPWGHGRPGWHIECSV 363

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M+S  LG   DIH GG+DL FPHH+NE+AQS          N ++H G L++EG KMSKS
Sbjct: 364 MASAILGDNMDIHSGGVDLAFPHHDNEMAQSEAYHDCSAWVNYFLHTGHLHIEGLKMSKS 423

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
             NFITI+E+LE  +F  R      +RL+ L   +   +DF+ + L + E+
Sbjct: 424 LKNFITIDEILE--RFTARQ-----LRLSFLSQLWNAKLDFS-EALMQGEV 466



 Score = 81.3 bits (199), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +   EF   +   ++ Y CGPTVYD +H+G+AR  +  D+L R++  Y+G  
Sbjct: 19  LKVYNTLTKAKNEFIPSNGRLVKWYNCGPTVYDASHMGHARNYVSQDILRRIMSDYFGYD 78

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V +V NITDID+KII+RAR+ H
Sbjct: 79  -VHFVMNITDIDNKIIDRARKTH 100


>gi|328766817|gb|EGF76869.1| hypothetical protein BATDEDRAFT_92152 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 755

 Score =  180 bits (457), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 130/237 (54%), Gaps = 17/237 (7%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS 166
           F  D   L    P    R + +IP++I  +Q I+ +G+AYE +  + FDT         S
Sbjct: 233 FFHDMDSLNIRRPDVLTRVSEYIPEIIAFVQKIMSNGYAYEFDGSVYFDTVCFDRSDKHS 292

Query: 167 RRKID----------EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
             KI+          ++  G    +   K+N +DF LWK S P EP W SPWG GRPGWH
Sbjct: 293 YAKIEPWSAGNVKLVQEGEGDLTADTSGKRNISDFALWKSSKPGEPSWSSPWGEGRPGWH 352

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECSAM+   LG+  DIH GG+DL FPHH+NE+AQS       +  N ++H G L++EG+
Sbjct: 353 IECSAMAGCVLGEKIDIHSGGIDLTFPHHDNELAQSEGHFGCTQWVNYFMHTGHLHIEGQ 412

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           KMSKS  NFI+I E LE          A  IR+  L+ H+   +D++   L+EA  +
Sbjct: 413 KMSKSLKNFISIKEALEQS-------TAQQIRIMYLLHHWDSTLDWSAGSLSEARTI 462



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ I N+L RK   F       +  Y CGPTVYD +H+G+AR    FD++ R++  Y+G 
Sbjct: 23  RLYINNSLTRKKELFVPEKGRRVTWYSCGPTVYDKSHVGHARTFFSFDIVRRIMSEYFGY 82

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV NITDIDDKII  ARQ+H
Sbjct: 83  D-LQYVMNITDIDDKIIVSARQKH 105


>gi|294155832|ref|YP_003560216.1| cysteine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600502|gb|ADE19998.1| cysteine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 408

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/346 (34%), Positives = 185/346 (53%), Gaps = 27/346 (7%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP++ FD++ R   Y    K    + NITDIDDKII +A +
Sbjct: 2   LKIYVCGPTVYNDLHIGNIRPILNFDLMLR--AYRNTGKDFILIHNITDIDDKIINKALE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E+      D + +I+ +   Q++K    L     +H     +++  M   I+NI  +  A
Sbjct: 60  ENV-----DEL-VISQRYANQYIKLLQELNIKTISHLEYVRDNLDVMKKYIENIRQNKDA 113

Query: 146 Y-EANNEIIFDTS-SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +    ++FD   +   YG+ S +KI++        E   KK+P+DF LWK+ T +   
Sbjct: 114 YLDKEGNVLFDVEKNKKAYGTVSNQKIEQMVFE---QENSTKKHPSDFSLWKK-TNVGVK 169

Query: 204 WESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           + S +G GRPGWH EC A+   H+ G+  DIHGGG+DL FPHHENE  Q     + +  A
Sbjct: 170 FNSQFGEGRPGWHTECCAIIDKHFPGQGVDIHGGGIDLKFPHHENENIQHYSLYK-KPLA 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WIH G +N  G KMSKS GN I   + LE  + G  ++     R+ +L+     P++ 
Sbjct: 229 KNWIHCGHINYNGEKMSKSLGNVILAKDFLE--EHGSNTF-----RMILLLADITSPMNL 281

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVL----SALYNDLNTVSA 364
           +   +  ++ + +K  Q +    ++D   +      LY +LN++ A
Sbjct: 282 SDSLIENSKKIYAKIKQVAFKNFLLDANKIIDLNEELYIELNSLVA 327


>gi|190347294|gb|EDK39538.2| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 769

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 129/228 (56%), Gaps = 18/228 (7%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGS 164
           +F +D  RL  L PT+  R + +IP+++  ++ II +G AY   +  + FDT+   N   
Sbjct: 241 KFNEDMARLNVLPPTYTTRVSEYIPEIMAFVEKIISNGFAYPTKDGSVYFDTAKFENDPK 300

Query: 165 FSRRKID----------EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
               K+               G+    +  KKNPADF LWK S P EP W+S WG GRPG
Sbjct: 301 HDYAKLQPWNKGDMSLINDGEGSLSLGQESKKNPADFALWKASKPGEPAWDSKWGPGRPG 360

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      E+  N ++HNG L+++
Sbjct: 361 WHIECSVMASDITGETMDIHSGGIDLCFPHHDNELAQSEAYFNNEQWVNYFMHNGHLHIQ 420

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           G+KMSKS  NFITI + L    F  R      +RL   M+ +  P+DF
Sbjct: 421 GQKMSKSLKNFITIEQAL--NDFTSRQ-----MRLVFAMSAWDRPLDF 461



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R  TEF  + P+++  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G  
Sbjct: 34  LMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHSHMGHARNYVSTDISRRILQDYFGYN 93

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            VT+V+N+TDIDDKII  ARQE+
Sbjct: 94  -VTFVQNVTDIDDKIIVAARQEY 115


>gi|146416571|ref|XP_001484255.1| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 769

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 129/228 (56%), Gaps = 18/228 (7%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGS 164
           +F +D  RL  L PT+  R + +IP+++  ++ II +G AY   +  + FDT+   N   
Sbjct: 241 KFNEDMARLNVLPPTYTTRVSEYIPEIMAFVEKIISNGFAYPTKDGSVYFDTAKFENDPK 300

Query: 165 FSRRKID----------EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
               K+               G+    +  KKNPADF LWK S P EP W+S WG GRPG
Sbjct: 301 HDYAKLQPWNKGDMSLINDGEGSLSLGQESKKNPADFALWKASKPGEPAWDSKWGPGRPG 360

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      E+  N ++HNG L+++
Sbjct: 361 WHIECSVMASDITGETMDIHSGGIDLCFPHHDNELAQSEAYFNNEQWVNYFMHNGHLHIQ 420

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           G+KMSKS  NFITI + L    F  R      +RL   M+ +  P+DF
Sbjct: 421 GQKMSKSLKNFITIEQAL--NDFTSRQ-----MRLVFAMSAWDRPLDF 461



 Score = 90.9 bits (224), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 60/83 (72%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R  TEF  + P+++  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G  
Sbjct: 34  LMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHSHMGHARNYVSTDISRRILQDYFGYN 93

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            VT+V+N+TDIDDKII  ARQE+
Sbjct: 94  -VTFVQNVTDIDDKIIVAARQEY 115


>gi|330468546|ref|YP_004406289.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328811517|gb|AEB45689.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 395

 Score =  180 bits (456), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 163/318 (51%), Gaps = 26/318 (8%)

Query: 23  PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
           P    MYVCG T YD  H+G+A  MI FD++ R+ R    E  V YV+N+TDIDD ++ER
Sbjct: 15  PGTATMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGHE--VRYVQNVTDIDDPLLER 72

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           A ++       +   ++  + T  F +D   L  + P H   A   IP++   +  ++  
Sbjct: 73  AERD------GEDWKVLAMRETALFREDMEALRIIPPAHYIGAVESIPEIAEKVLVLLKD 126

Query: 143 GHAY---EANNEIIFDTSSIPNYG---SFSRRKIDE---QKMGTRVPEKYHKKNPADFIL 193
             AY   +   ++ FD S+ P +G   + SR ++ E   ++ G   P++  K++P D +L
Sbjct: 127 DAAYRLDDGTGDVYFDISAAPRFGYESNLSRAEMLELFPERGGD--PDRAGKRDPLDPLL 184

Query: 194 WKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           W+ +   EP W     G GRPGWHIEC+ ++   LG   D+ GGG DLIFPHHE   A +
Sbjct: 185 WRGAREGEPSWPGGELGPGRPGWHIECTVIALALLGNTIDVQGGGNDLIFPHHECSAAHA 244

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                    A  ++H G + L+G KMSKS GN + ++ L   K           +RLA+L
Sbjct: 245 ERLTGAAPFAGHYVHAGMIGLDGEKMSKSLGNLVFVSRLRADKV------DPMAVRLALL 298

Query: 313 MTHYREPIDFTVQRLTEA 330
             HYR    +T   L  A
Sbjct: 299 SGHYRADRSWTDDLLATA 316


>gi|297626576|ref|YP_003688339.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922341|emb|CBL56913.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 418

 Score =  179 bits (455), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 133/435 (30%), Positives = 203/435 (46%), Gaps = 55/435 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + +++ +  T  R+       D  +  +YVCG T YD  H+G+A   ++FDVL R+ R  
Sbjct: 21  VPERLVMVTTNNRRAVPIGPAD-GDAGLYVCGITPYDATHMGHAFTYVMFDVLDRVWRDL 79

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLAC 116
                V Y +N+TD+DD ++ERAR          A  +    + S  TQ F  D   L  
Sbjct: 80  --GLNVRYAQNVTDVDDPLLERAR----------ATGVDWRELASDQTQLFRDDMESLRV 127

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGS---FSRRK 169
           L P     AT+ I +++ LI+ +   G  Y+ ++    +  F+    P +G+    SR+ 
Sbjct: 128 LPPRWYVPATSIIDEVVELIERLRQQGTIYQVDDPQYPDWYFEVGKAPGFGTESHLSRQD 187

Query: 170 -IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            I E       PE+  K++  D ++W+   P EP W+S  GRGRPGWHIEC+A + + LG
Sbjct: 188 MISEFAEHGGDPERPGKRDALDCLVWRMERPGEPAWDSRLGRGRPGWHIECTATALNRLG 247

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT----ANIWIHNGFLNLEGRKMSKSNGN 284
           + F + GGG DL FPHHE      C A+ I  T    A  +IH G + L+G KMSKS GN
Sbjct: 248 EDFAVQGGGRDLAFPHHE-----MCAAEAIVATGKPFAEAYIHVGMVGLDGEKMSKSLGN 302

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-PQTSTS 343
            + ++      K   +      IRLA+L   Y     +T   L +A+  L  W   T  S
Sbjct: 303 LVLVS------KLRAQGVDPMAIRLALLAHGYASDWSWTQAGLDDAQRRLDAWRAATRAS 356

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-SAHILGIEVCKEHLN 402
            G              + V  I  + +  RE       L + +  S+ +L  +       
Sbjct: 357 SGT-------------DAVPVIADIRRALREGLDTPTALAVVDEWSSAVLAGDGDDLAAP 403

Query: 403 KNISIAIEKLVQERL 417
           + IS A++ L+  RL
Sbjct: 404 QQISQAVDALLGIRL 418


>gi|167519473|ref|XP_001744076.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777162|gb|EDQ90779.1| predicted protein [Monosiga brevicollis MX1]
          Length = 667

 Score =  179 bits (455), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 132/237 (55%), Gaps = 17/237 (7%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-----TSSIP 160
           +F +D + L         R T ++PQ++  IQ II +G AYE+N  + FD     T    
Sbjct: 171 EFFQDMSALNVEPADVITRVTGYVPQIVAYIQRIIDNGFAYESNGSVYFDVTKFRTDKDH 230

Query: 161 NYGSFSRRKIDEQKM-----GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
            Y       +   K+     G        K+N +DF LWK S P EP W SPWG+GRPGW
Sbjct: 231 TYAKLKPEAVGNDKLLSDGEGALSGAGSEKRNQSDFALWKASKPGEPSWTSPWGQGRPGW 290

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIECSAM+S  LG   DIH GG+DL FPHH+NE+AQS    + ++  N ++H+G L++EG
Sbjct: 291 HIECSAMASDILGDNMDIHSGGVDLQFPHHDNELAQSEAYFQNDQWVNYFLHSGHLHIEG 350

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
            KMSKS  NFITI + LET       + A  IR   L+  + + ++++     EA++
Sbjct: 351 LKMSKSLKNFITIKQALET-------YTARQIRFMFLLHSWTDTLNYSADAFEEAQV 400



 Score = 63.2 bits (152), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 38/59 (64%), Positives = 46/59 (77%), Gaps = 1/59 (1%)

Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          Y CGPTVYD AH+G+AR  + FD+L R+LR Y+G   V +V NITDIDDKII RARQ+H
Sbjct: 12 YACGPTVYDAAHLGHARSYVSFDILRRILREYFGYD-VQFVMNITDIDDKIIIRARQQH 69


>gi|84496470|ref|ZP_00995324.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383238|gb|EAP99119.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 414

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/371 (32%), Positives = 192/371 (51%), Gaps = 36/371 (9%)

Query: 17  EFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           E + + P  + R+YVCG T YD  H+G+A   + FD++ R+LR    E  V Y +N+TD+
Sbjct: 28  ELREVVPGEVARLYVCGITPYDATHLGHAATYVAFDLVGRVLRDNGHE--VHYTQNVTDV 85

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DD ++ERA+++   I   D    +       + +D T L  + P         +P +  L
Sbjct: 86  DDPLLERAKRD--GIDWRD----LAVAEADLYREDMTALQVIPPQDYIGVVEALPVIADL 139

Query: 136 IQNIILHGHAYEANNE------IIFDTSSIPNYGSFSRRKIDE------QKMGTRVPEKY 183
           ++  I  G AYE  N+      +  D S +  +G  S    ++      ++ G   P++ 
Sbjct: 140 VRRTIESGAAYELPNDEAEGPDLYVDLSHVSGFGKVSGWTREQMLTVFAERGGD--PDRP 197

Query: 184 HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            K++  D +LW+ +   EP WE      GRPGWH+EC+A++   LG   D++GGG DLIF
Sbjct: 198 GKRDVLDPLLWRAARDGEPSWEFEGLPAGRPGWHVECTAIALDRLGVPIDVNGGGSDLIF 257

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE  +AQ+  A  ++  A +  H G + L+G KMSKS GN + +++L    +  G   
Sbjct: 258 PHHEMTVAQA-SAIGVDDYARLHAHAGMVGLDGHKMSKSRGNLVLVSKL----RADGVDP 312

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVLSALYN 357
            A  IRL +L  HYR   D+T + LT A+  L  W +     T+ S      A+ +AL +
Sbjct: 313 MA--IRLVLLAEHYRSDWDYTPELLTVAQTRLEHWREALSVNTAPSADETVAAIRAALSD 370

Query: 358 DLNTVSAIQAL 368
           DL+   A+ A+
Sbjct: 371 DLDAPRALAAI 381


>gi|308802207|ref|XP_003078417.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116056869|emb|CAL53158.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 503

 Score =  179 bits (455), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 134/242 (55%), Gaps = 17/242 (7%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
           I D    +  +   +F++D   L    P    R + ++ ++I  IQ II  G AYE+NN 
Sbjct: 199 IQDGYLELAREFEAEFMEDMKSLGIARPDALTRVSEYVDKVILYIQVIINKGFAYESNNS 258

Query: 152 IIFDTSSIPN-----YGSFSRRKID--EQKM---GTRVPEKYHKKNPADFILWKRSTPME 201
           + FD  +        YG  ++  +   E+ M   G    EK  K++  DF+LWK S   E
Sbjct: 259 VYFDVKAFEEAENHKYGKLNKNAMANVEEAMDGEGALAAEKSEKRSEFDFVLWKASKSGE 318

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           P W SPWG GRPGWHIECSAM S  LGK  DI+GGG+DL FPHHEN++AQS     IE+ 
Sbjct: 319 PSWSSPWGMGRPGWHIECSAMCSDVLGKSVDINGGGIDLNFPHHENQLAQSEAHYDIEQW 378

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N +IH G L+++G KMSKS  NFITI   L       + + A  IR   L+  + +P++
Sbjct: 379 VNFFIHTGHLHIDGLKMSKSLKNFITIRAAL-------KMYSARQIRFLFLLNQWCDPME 431

Query: 322 FT 323
            T
Sbjct: 432 LT 433



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 1/83 (1%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +++  ++ NT  +    F  +  +++  Y+CGPTVYD AH+G+AR  + FDVL R++  Y
Sbjct: 43  LRRGPRLLNTFTKTKVPFVPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVMSEY 102

Query: 61  YGEKCVTYVRNITDIDDKIIERA 83
           +G   V +V N+TDIDDKII RA
Sbjct: 103 FGYD-VRFVMNVTDIDDKIIMRA 124


>gi|157105607|ref|XP_001648945.1| cysteinyl-tRNA synthetase [Aedes aegypti]
 gi|108880067|gb|EAT44292.1| cysteinyl-tRNA synthetase [Aedes aegypti]
          Length = 735

 Score =  179 bits (454), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 96/253 (37%), Positives = 134/253 (52%), Gaps = 20/253 (7%)

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           ++E  S+  N     +      +F KD   L  LAP    R + ++PQ++  IQ II +G
Sbjct: 191 KKEGASVNENSIFETLPRYWEDEFHKDMNALNVLAPDVLTRVSEYVPQIVEYIQKIIDNG 250

Query: 144 HAYEANNEIIFDTSS------------IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            AYEAN  + FD +             +P  YG     +  E  + T       K++P D
Sbjct: 251 LAYEANGSVYFDVAGFDKREKHYYAKLVPEAYGDAKSLQEGEGDLSTTEDRLSEKRSPND 310

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S   EP W SPWG+GRPGWHIECSAM+S   G   DIH GG+DL FPHH+NE+A
Sbjct: 311 FALWKNSKAGEPWWNSPWGKGRPGWHIECSAMASDICGDYLDIHTGGVDLKFPHHDNELA 370

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS   D   +    ++H G L + G KMSKS  NF+TI + L+          A  +RLA
Sbjct: 371 QSEAHDNSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQALQKH-------TATQLRLA 423

Query: 311 MLMTHYREPIDFT 323
            L+  +++ +D++
Sbjct: 424 FLLHSWKDTLDYS 436



 Score = 93.2 bits (230), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R+   F   D  N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 20  KLRLYNSLTRQKELFVPKDGKNVKWYSCGPTVYDASHMGHARSYISFDILRRVLTDYFGY 79

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V YV NITDIDDKII+RARQ +
Sbjct: 80  N-VLYVMNITDIDDKIIKRARQNY 102


>gi|308190282|ref|YP_003923213.1| cysteine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307625024|gb|ADN69329.1| cysteine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 411

 Score =  179 bits (454), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 136/429 (31%), Positives = 211/429 (49%), Gaps = 36/429 (8%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN  P++ FD++ +  R   GEK  T+V NITDIDDKII RAR+
Sbjct: 2   LKIYVCGPTVYNDLHIGNMVPILTFDLMLKA-RRVLGEK-FTFVHNITDIDDKIINRARE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 +N +   ++ K T+ ++K    L     +H  + T+++  +I  +   + + +A
Sbjct: 60  ------LNISEKELSQKYTKDYLKLLKTLDVDTISHLEKVTDNMGLIIEYVNKQVKNNNA 113

Query: 146 Y-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +    + FD     N YG  +   +D+        +  +KK  ADF LWK+ T +   
Sbjct: 114 YIDQEGNVWFDVKKFENHYGQVANLNLDKMIFE---EQNNNKKFEADFALWKK-TNVGIQ 169

Query: 204 WESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           ++SP+ +GRPGWH EC  + + H+  K  DIHGGG+DL FPHHENE  Q       + T 
Sbjct: 170 FDSPFSKGRPGWHTECVVLINKHFKNKGLDIHGGGMDLTFPHHENENIQHFALYNQDITK 229

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G +N EG KMSKS GN I   + L       +     +++L +L +    PI+ 
Sbjct: 230 E-WIRCGQINYEGEKMSKSLGNVILAKDFL-------KEHDREILKLIILSSKISAPINV 281

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL- 381
           T + +    ++L+K+ +      I    +  +  N       I    K+   S  N+ L 
Sbjct: 282 TNELIENMYVILNKYKKLIFKFFINFKNIDKSKINKNEEFIKIMNSLKIGDFSDFNYLLN 341

Query: 382 --LPIFNASAHILGIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADY 430
             +  FN + +I   E+    L           N + A E   Q R  + K K++  AD 
Sbjct: 342 EQIKEFNKTKNIKNAEIIFNTLKVIHPQLTIKANYNKAFELFDQWRCFIDK-KEYKQADK 400

Query: 431 IRKQLESKG 439
           IRK+L   G
Sbjct: 401 IRKKLMKLG 409


>gi|19115476|ref|NP_594564.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1351621|sp|Q09860|SYC_SCHPO RecName: Full=Probable cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1044932|emb|CAA91428.1| putative cysteinyl-trna synthetase [Schizosaccharomyces pombe]
 gi|6723893|emb|CAB66469.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 754

 Score =  179 bits (453), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 127/226 (56%), Gaps = 18/226 (7%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSF 165
           F KD   L  L PT   R + ++P+++  +Q II  G+AY   +  + FDT +    G F
Sbjct: 229 FNKDMANLNVLPPTAVTRVSEYVPEIVDFVQRIIDRGYAYPVTDGSVYFDTEAFEKGGHF 288

Query: 166 SRRKIDEQKMGTR---------VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
              K++    G R         +     KK P DF LWK S P EP W+SPW +GRPGWH
Sbjct: 289 -YAKLEPWNKGNRELIAEGEGSLAALTGKKRPGDFALWKASKPGEPSWDSPWSKGRPGWH 347

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECS M+S  LG   DIH GG+DL FPHH+NE+AQS       +  N + H G L++EG+
Sbjct: 348 IECSVMASALLGSNIDIHSGGIDLAFPHHDNELAQSEAYFDCPQWVNYFFHAGHLHIEGQ 407

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           KMSKS  NFITI E+L  KKF  R      +RLA L+  +   +DF
Sbjct: 408 KMSKSLKNFITIKEIL--KKFTPRQ-----LRLAFLLQQWNTQLDF 446



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 2/86 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++ +YNTL      F + + SN+  Y CGPTVYD +H+G+AR  +  D+L R+L+ Y+
Sbjct: 18  RTELYVYNTLTHSKVPFVS-NGSNLTWYCCGPTVYDASHMGHARNYVTTDILRRILQSYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   +T+V+N+TDIDDKII RARQ++
Sbjct: 77  GYN-ITFVQNVTDIDDKIILRARQQY 101


>gi|269956278|ref|YP_003326067.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Xylanimonas cellulosilytica DSM 15894]
 gi|310947227|sp|D1BS17|MSHC_XYLCX RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|269304959|gb|ACZ30509.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Xylanimonas cellulosilytica DSM 15894]
          Length = 404

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/345 (31%), Positives = 170/345 (49%), Gaps = 37/345 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++++  + + E  A   +   +Y CG T YD  H+G+A   + FD+L R   +    K
Sbjct: 21  VLVHDSTTQSLVE--AAPGATATLYACGITPYDATHLGHANTYLAFDLLQRA--WLDAGK 76

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLACLAPT 120
            V Y  N+TD+DD ++ERA           A  +    +  + T+ +  D T L  L P 
Sbjct: 77  TVVYTSNVTDVDDPLLERAT----------ATGVDWRELAREQTELYRTDMTALRMLPPA 126

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS------RRKIDEQK 174
               A   IP ++  +  ++  G AY  + ++  D S+ P +G  +       R +  ++
Sbjct: 127 TWTGAVESIPAVVEAVTALLDAGAAYRVDADVYADLSADPGFGRVAGLDDATMRALFAER 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDI 233
            G   P++  KK+P D  LW+   P EP W+    G GRPGWHIEC+ ++   LG  FD+
Sbjct: 187 GGD--PDRPGKKHPLDPALWRGEQPGEPSWDGGKLGPGRPGWHIECAVIARDGLGLPFDV 244

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL+FPHH  E++ S         A + +H G L  +G KMSKS GN + ++ LL 
Sbjct: 245 QGGGADLLFPHH--EMSTSHARLLAGGAARVHVHAGLLAYDGHKMSKSRGNLVFVSRLLA 302

Query: 294 TKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
                      P+ +RLA+L  HYRE  ++T   L  A+  L  W
Sbjct: 303 AGT-------DPMTVRLALLAHHYREEWEWTDVELRTAQRRLDTW 340


>gi|317506755|ref|ZP_07964536.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Segniliparus rugosus ATCC BAA-974]
 gi|316254954|gb|EFV14243.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Segniliparus rugosus ATCC BAA-974]
          Length = 354

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/357 (30%), Positives = 179/357 (50%), Gaps = 41/357 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++++++ +R +   + + P     MYVCG T YD  H+G+A   + FD++ RL  +   
Sbjct: 18  QLRLWDSADRLL---RPVAPGRKAGMYVCGITPYDATHLGHAATYLAFDLVCRL--WLDA 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y +NITD+DD ++ERA ++      +     + ++  + F  D   L  L P   
Sbjct: 73  GHEVHYTQNITDVDDPLLERAERD------DRDWRALAAEQIELFRTDMAALRVLPPQDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
              T  I  ++ +++ ++ +  AY        ++     +  ++G  S    DE    TR
Sbjct: 127 VGVTESIDLVVAMVEKLLANQSAYVVAEGEYPDVYHRVGATEDFGYVSGYDRDEM---TR 183

Query: 179 V-------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           V       P++  K +P D +LW+ + P EP W SP+G GRPGWH+ECSA++   +G  F
Sbjct: 184 VFRERGGDPDRPGKADPLDALLWRAARPGEPSWPSPFGPGRPGWHVECSAIALDRIGFGF 243

Query: 232 DIHGGGLDLIFPHHENEIAQS------CC---ADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           D+ GGG DL+FPHHE   A +      C    AD   + A  ++H G + L+G KMSKS 
Sbjct: 244 DVQGGGADLVFPHHEFSAAHAQAQVGGCSVPGADGRGRFARNYVHAGMIGLDGEKMSKSL 303

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           GN + +++L               IRLA+   HYR    +    L +A+  LS+W Q
Sbjct: 304 GNLVFVSKLRAAGV------DPSAIRLALFAGHYRADRSWDQNLLAQAQARLSRWRQ 354


>gi|195382430|ref|XP_002049933.1| GJ21863 [Drosophila virilis]
 gi|194144730|gb|EDW61126.1| GJ21863 [Drosophila virilis]
          Length = 741

 Score =  178 bits (451), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/247 (39%), Positives = 135/247 (54%), Gaps = 23/247 (9%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------- 158
           F  D   L  L P    R + ++PQ++  IQ II +G AYEAN  + FD +         
Sbjct: 215 FHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGLAYEANGSVYFDVNGFDKREKHH 274

Query: 159 ----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
               +P  YG  +  +  E  +         K++P DF LWK S   EP W+SPWG GRP
Sbjct: 275 YAKLVPEAYGDTTSLQEGEGDLSVTADRLSEKRSPNDFALWKASKAGEPWWDSPWGHGRP 334

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+S   G +FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L +
Sbjct: 335 GWHIECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQSEAAFGESEWVKYFLHTGHLTI 394

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTEA 330
            G KMSKS  NF+TI E L       R   A  +RLA L+  +++ +D+   T++  T+ 
Sbjct: 395 AGCKMSKSLKNFVTIQEAL-------RKHSATQLRLAFLLHSWKDTLDYSENTMEMATQY 447

Query: 331 EILLSKW 337
           E  L+++
Sbjct: 448 EKFLNEF 454



 Score = 95.9 bits (237), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++YN+L R+  EF  +  +N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPQLRLYNSLTRQKEEFVPLSGNNVKWYSCGPTVYDASHMGHARSYISFDILRRILANYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + YV NITDIDDKII+RARQ H
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQYH 101


>gi|71406898|ref|XP_805952.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70869553|gb|EAN84101.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 785

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/327 (34%), Positives = 159/327 (48%), Gaps = 48/327 (14%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG--- 163
           F +D  RL    P    R T ++PQ++  IQ I+ +G AY   + I FDT++    G   
Sbjct: 246 FFEDMRRLGVRDPDVVSRVTEYVPQVVDFIQKIMDNGFAYRGTSSIFFDTTAFLRAGHDY 305

Query: 164 ------------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                         +  ++ E +    V     K+N  DF LWK S P EP W SPWG G
Sbjct: 306 PKLKPVSESGENDATEAEMAEGEGALTVGVAGEKRNANDFALWKFSKPGEPRWPSPWGEG 365

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   D+H GG DL FPHH+NE AQS       +  N ++H G L
Sbjct: 366 RPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDNECAQSEACHMQHQWINYFLHCGHL 425

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
           +++G KMSKS  NFITI + L+      R     V+RL  L  H+ +P++F+ Q + EA 
Sbjct: 426 HIKGLKMSKSLKNFITIRQALDELDVTPR-----VMRLLFLANHWGKPMNFSDQSIEEAK 480

Query: 331 -------------EILLSK--WPQTSTSKG----------IIDPAVLSALYNDLNTVSAI 365
                        +I+L K  W +T    G            + AV  AL N+ +T +A+
Sbjct: 481 ERERVLRAFFGSVDIVLRKDNWGETQGLNGHDRRLQETWLTAENAVHGALQNNFDTPAAM 540

Query: 366 QALHKLARESTKNHDLLPIFNASAHIL 392
            ++  L      NH LL     SA ++
Sbjct: 541 DSVMGLV--GATNHYLLSGERPSATLV 565



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ N+L   +  F   +   +R Y CGPTVY+ +H+G+AR  + FD+L R++  Y+G
Sbjct: 37  KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMEDYFG 96

Query: 63  EKCVTYVRNITDIDDKIIERAR 84
            + V Y  NITDIDDKII+RAR
Sbjct: 97  YQVV-YQMNITDIDDKIIKRAR 117


>gi|221043810|dbj|BAH13582.1| unnamed protein product [Homo sapiens]
          Length = 341

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/259 (40%), Positives = 144/259 (55%), Gaps = 21/259 (8%)

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R T +
Sbjct: 2   VMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTEN 55

Query: 129 IPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKK 186
           IPQ I  I+ II  G+AY  A   + FD  S  + YG      +    +G   P    K+
Sbjct: 56  IPQTISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLV--GVVPGPVGE--PADSDKR 111

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           + +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL FPHHE
Sbjct: 112 HASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHE 171

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPA 304
           NEIAQ     + E+  N ++H+G L+ +G+  KMSKS  N+ITI + L+T       +  
Sbjct: 172 NEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKT-------FSP 224

Query: 305 PVIRLAMLMTHYREPIDFT 323
            V R   L + YR  ID++
Sbjct: 225 DVFRFFCLRSSYRSAIDYS 243


>gi|156848081|ref|XP_001646923.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117605|gb|EDO19065.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 769

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 93/238 (39%), Positives = 131/238 (55%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGS 164
           Q+  D  +L  L P    R + ++P++I  ++ II +G+AY A++  + FDT +      
Sbjct: 242 QYDNDMAKLNVLPPNVTTRVSEYVPEIIEFVEKIISNGYAYAADDGSVYFDTQNFDTSKD 301

Query: 165 FSRRKI------------DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            S  K             D +   +       KK+P+DF LWK S P EP WESPWG+GR
Sbjct: 302 HSYAKCQPWNKGHLDLINDAEGSLSNFSNTNGKKSPSDFALWKASKPGEPEWESPWGKGR 361

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS       +  N ++H G L+
Sbjct: 362 PGWHIECSVMASDILGQNIDIHSGGIDLAFPHHDNELAQSEAHFDNNQWINYFLHTGHLH 421

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +EG+KMSKS  NFITI+E L       + + A  +RLA     +   +DF    + E 
Sbjct: 422 IEGQKMSKSLKNFITIDEAL-------KMYSARQLRLAFASVQWNNQLDFKESLINEV 472



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 56/87 (64%), Gaps = 2/87 (2%)

Query: 2   KKKIKIYNTLERKITEF-QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           K  +K+YNTL R   EF        +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y
Sbjct: 36  KSVLKVYNTLTRSKEEFIPRSGTKEVSWYSCGPTVYDASHMGHARNYVSIDINRRILQDY 95

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEH 87
           +G   + +V+N+TDIDDKII RARQ H
Sbjct: 96  FGYN-INFVQNVTDIDDKIILRARQNH 121


>gi|119964010|ref|YP_947911.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|310947171|sp|A1R6P9|MSHC_ARTAT RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|119950869|gb|ABM09780.1| putative cysteinyl-tRNA synthetase (cysS) [Arthrobacter aurescens
           TC1]
          Length = 425

 Score =  177 bits (449), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 201/431 (46%), Gaps = 61/431 (14%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y+T   ++ + +   P    MYVCG T YD  H+G+A   + FD+L R  R   G 
Sbjct: 18  QLRLYDTALGRVVDVER-QPEQ-SMYVCGITPYDATHMGHAASYVAFDLLNRAWRDA-GV 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLACLAP 119
           + V+YV+N+TDIDD ++ERA           A  +    +       F  D   L  LAP
Sbjct: 75  R-VSYVQNVTDIDDPLLERAT----------ATGVDWRELAQSQIDLFQTDMDALNVLAP 123

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSS-------------- 158
            H   A   IP ++  I+ +I  G AY       E + ++ +D  +              
Sbjct: 124 NHYIGAVEAIPDIVPAIEQLIADGVAYRVAGSEGEPDGDVYYDVETAGKRSDATDAWTLG 183

Query: 159 -IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWH 216
            +   G     ++  ++ G   P +  K++  D +LW+ +   EP W  S  G GRPGWH
Sbjct: 184 DVSGLGEKEMLELFAERGGD--PTRAGKRHALDPLLWRVARDGEPSWPGSTLGDGRPGWH 241

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IEC+ ++  YL   F + GGG DL+FPHHE     +     +   A  + H G + L+G 
Sbjct: 242 IECTVIAQKYLPAPFTVQGGGSDLVFPHHEMGAGHAYSLSGV-PLARHYSHAGMVGLDGE 300

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN + +++L    +      PA  IRLA+L  HYR    +T     EA+  L +
Sbjct: 301 KMSKSKGNLVLVSKLRAAGEE-----PA-AIRLAILAHHYRSDWSWTDAEFAEAKDRLKQ 354

Query: 337 WPQT-----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------HDLLPIF 385
           W        + S   +  A+   L NDLN   AI A+   A E+ ++       D   + 
Sbjct: 355 WRAALDHAPAGSAAALISAMRDELANDLNAPGAIAAVDHWAAEAIRSGSDKSEQDTALVT 414

Query: 386 NASAHILGIEV 396
           +A   +LG+E+
Sbjct: 415 DAIDALLGVEL 425


>gi|238064513|ref|ZP_04609222.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237886324|gb|EEP75152.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 412

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 114/353 (32%), Positives = 178/353 (50%), Gaps = 31/353 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A  MI FD++ R+ R       V YV+N+TDIDD ++ERA ++ 
Sbjct: 40  MYVCGITPYDATHLGHAATMITFDLVQRMWRD--AGLTVRYVQNVTDIDDPLLERAARD- 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 +   ++  + T  F +D   L  + P H   A   IP +   +  ++  G AY 
Sbjct: 97  -----GEDWKVLAMRETALFREDMEALRMIPPAHYVGAVESIPDIADKVLVLLKDGAAYR 151

Query: 147 --EANNEIIFDTSSIPNYG---SFSRRKIDE---QKMGTRVPEKYHKKNPADFILWKRST 198
             +   ++ FD ++ P +G   + SR ++ E   ++ G   PE+  K++P D +LW+ + 
Sbjct: 152 LDDGTGDVYFDIAATPEFGYESNLSRAEMLEIFPERGGD--PERAGKRDPLDPLLWRGAR 209

Query: 199 PMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W     G GRPGWHIEC+ ++ + LG+  D+ GGG DL+FPHHE   A +     
Sbjct: 210 EGEPSWPGGDLGPGRPGWHIECAVIALNLLGESIDVQGGGNDLLFPHHECSAAHAERLTG 269

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A  ++H G + L G KMSKS GN + ++ L   +           +RL ++  HYR
Sbjct: 270 RSPFATHYVHAGMIGLNGEKMSKSRGNLVFVSRLRADRV------DPMAVRLGLMAGHYR 323

Query: 318 EPIDFTVQRLTEAE----ILLSKWPQTSTSKGI-IDPAVLSALYNDLNTVSAI 365
               +T   LT A+             +   G+ +  AV + L +DL+T  AI
Sbjct: 324 ADRTWTEDLLTVAQERLARWRRAAAAPAGPSGVELMSAVRARLADDLDTPGAI 376


>gi|170093199|ref|XP_001877821.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647680|gb|EDR11924.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 796

 Score =  177 bits (449), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/232 (39%), Positives = 130/232 (56%), Gaps = 16/232 (6%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSF 165
           +F  +  RL    P    R T ++P+++  ++ II +G+AYEA   + FDT +       
Sbjct: 270 KFFDEMARLKVREPDIVTRVTEYVPEIVAYVERIIQNGYAYEAEGSVYFDTLTFDGTDGH 329

Query: 166 SRRKIDEQKMGTR---------VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
           +  K++    G R         +  +  +++P+DF LWK S P EP W SPWG GRPGWH
Sbjct: 330 NYAKLEPWSKGNRELLEGGEGALSSRTGRRSPSDFALWKASKPGEPSWPSPWGPGRPGWH 389

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECS M+S   G+  DIH GG DL FPHH+NE+AQ+          N ++H G L++EG 
Sbjct: 390 IECSVMASAIFGENIDIHSGGSDLAFPHHDNEMAQAEAYHNCSPWVNYFLHTGHLHIEGL 449

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           KMSKS  NFITI+E+L+  KF  R      +RLA L   +   +DF+   +T
Sbjct: 450 KMSKSLKNFITIDEILQ--KFTPRQ-----LRLAFLTQLWNSKVDFSESLMT 494



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L +  TEF   +  +++ Y CGPTVYD +H+G+AR  +  D+L R++  Y+G  
Sbjct: 55  LRVYNSLTKTKTEFVPTNGRHVKWYNCGPTVYDASHMGHARNYVTQDILRRIMSDYFGYD 114

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V +V N+TDIDDKIIERARQ H
Sbjct: 115 -VHFVMNVTDIDDKIIERARQNH 136


>gi|270000778|gb|EEZ97225.1| hypothetical protein TcasGA2_TC011023 [Tribolium castaneum]
          Length = 730

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 131/232 (56%), Gaps = 21/232 (9%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PN 161
           Q+F KD   L  L P    R + +IP++I  I  II +G  YEAN  + FD ++    PN
Sbjct: 211 QEFHKDMEALNILKPHVLTRVSEYIPEIIGYISRIISNGFGYEANGSVYFDVAAFDKQPN 270

Query: 162 ----------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                     YG  +  +  E  + T   ++  K +P DF LWKRS P EP W+SPWG+G
Sbjct: 271 HYYAKLVPEAYGDTNSLQEGEGDL-TTADQRNEKHSPNDFALWKRSKPGEPAWDSPWGKG 329

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+S   G   DIH GG+DL FPHH+NEIAQS       +    ++H+G L
Sbjct: 330 RPGWHIECSAMASTIFGDTLDIHTGGVDLKFPHHDNEIAQSEAHFGASEWVKYFLHSGHL 389

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            + G KMSKS  NF++I + L   K+  R      +R A L+  +R+ +D++
Sbjct: 390 TIAGCKMSKSLKNFVSIQDAL--AKYTARQ-----LRFAFLLHAWRDTLDYS 434



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R+   F+ I    +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFDILRRVLADYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            + +V NITDIDDKII+RARQ +
Sbjct: 80  -IFFVMNITDIDDKIIKRARQNY 101


>gi|195150237|ref|XP_002016061.1| GL10698 [Drosophila persimilis]
 gi|194109908|gb|EDW31951.1| GL10698 [Drosophila persimilis]
          Length = 741

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/248 (39%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           QF  D   L  L P    R + ++PQ++  IQ II +G AY ANN + FD +        
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQKIIDNGLAYAANNSVYFDVNGFDRKEKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++  DF LWK S   EP W+SPWGRGR
Sbjct: 274 HYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 YEKFLNEF 454



 Score = 97.8 bits (242), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+++YN+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILADYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + YV NITDIDDKII+RARQ H
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQNH 101


>gi|189241753|ref|XP_968189.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 734

 Score =  176 bits (447), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 131/232 (56%), Gaps = 21/232 (9%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PN 161
           Q+F KD   L  L P    R + +IP++I  I  II +G  YEAN  + FD ++    PN
Sbjct: 211 QEFHKDMEALNILKPHVLTRVSEYIPEIIGYISRIISNGFGYEANGSVYFDVAAFDKQPN 270

Query: 162 ----------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                     YG  +  +  E  + T   ++  K +P DF LWKRS P EP W+SPWG+G
Sbjct: 271 HYYAKLVPEAYGDTNSLQEGEGDL-TTADQRNEKHSPNDFALWKRSKPGEPAWDSPWGKG 329

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+S   G   DIH GG+DL FPHH+NEIAQS       +    ++H+G L
Sbjct: 330 RPGWHIECSAMASTIFGDTLDIHTGGVDLKFPHHDNEIAQSEAHFGASEWVKYFLHSGHL 389

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            + G KMSKS  NF++I + L   K+  R      +R A L+  +R+ +D++
Sbjct: 390 TIAGCKMSKSLKNFVSIQDAL--AKYTARQ-----LRFAFLLHAWRDTLDYS 434



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R+   F+ I    +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFDILRRVLADYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            + +V NITDIDDKII+RARQ +
Sbjct: 80  -IFFVMNITDIDDKIIKRARQNY 101


>gi|299752108|ref|XP_001830705.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298409681|gb|EAU91074.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 820

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/309 (34%), Positives = 156/309 (50%), Gaps = 48/309 (15%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F  D  +L  + P    R T+++P++I  I  II +G+AY     + FD  +       
Sbjct: 307 EFFSDMAKLNVVPPDVVTRVTDYVPEIINFIDRIIQNGYAYSVGGNVYFDIRAFNQAPGH 366

Query: 162 -YGSFSRRKIDEQKM---GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHI 217
            YG       +   M   G   P   HKK+P+DF LWK S P EP WESPWG GRPGWHI
Sbjct: 367 QYGKLIPWNENHGGMDDAGDTAPAA-HKKSPSDFALWKASKPGEPFWESPWGPGRPGWHI 425

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           ECSAM++  LG+  DIH GG+DL+FPHH NE+AQS    + +   + +IH G L+++G K
Sbjct: 426 ECSAMATAILGEKLDIHSGGIDLLFPHHTNELAQSEAYFKTDSWVDCFIHTGHLHIQGLK 485

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL--- 334
           MSKS  NFI+I ++L+        + A  +RLA L+  +    DF+     ++E+L    
Sbjct: 486 MSKSLKNFISIKDILQC-------YTADQLRLAFLLHPWHAKFDFS-DEFMKSEVLTLEA 537

Query: 335 -----------------SKWPQTSTSKGIIDP-----------AVLSALYNDLNTVSAIQ 366
                            S +P  +   G  +            A  SAL N +++V A+ 
Sbjct: 538 FFANLFSRTRSLARAAQSSYPPPAQHFGAHEAVLRTQLEDAKVAFRSALANSIDSVGALN 597

Query: 367 ALHKLARES 375
            L KL  ++
Sbjct: 598 VLRKLTSQT 606



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ +YN+L +  TE  +     ++ Y CGPTVYD +H+G+AR  +  DV+ R+L  Y+G 
Sbjct: 87  KLLLYNSLTKSKTEVTSASARPLKWYSCGPTVYDTSHLGHARNYVTQDVMRRILTDYFGL 146

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV N+TDIDDKIIER RQ +
Sbjct: 147 N-IQYVMNVTDIDDKIIERTRQHY 169


>gi|125807796|ref|XP_001360523.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
 gi|122097947|sp|Q291L4|SYCC_DROPS RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|54635695|gb|EAL25098.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
          Length = 741

 Score =  176 bits (447), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/248 (39%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           QF  D   L  L P    R + ++PQ++  IQ II +G AY ANN + FD +        
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQKIIDNGLAYAANNSVYFDVNGFDRKEKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++  DF LWK S   EP W+SPWGRGR
Sbjct: 274 HYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 YEKFLNEF 454



 Score = 97.4 bits (241), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 63/86 (73%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+++YN+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILADYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + YV NITDIDDKII+RARQ H
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQNH 101


>gi|47213255|emb|CAF92916.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 852

 Score =  176 bits (446), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +  +I +G+ YE+N  + FDT+       
Sbjct: 264 EEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVAKVISNGYGYESNGSVYFDTAKFDASPQ 323

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +Y       + +QK        +         KK+P DF LWK S P EP W+SPWG+G
Sbjct: 324 HSYAKLVPEAVGDQKALQEGEGDLSVSAERLSEKKSPNDFALWKASKPGEPSWDSPWGKG 383

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG+  D+HGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 384 RPGWHIECSAMAGTVLGESMDVHGGGFDLRFPHHDNELAQSEAFFDNDHWVRYFLHTGHL 443

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI E L           A  +RLA LM  +++ +D++   +  A
Sbjct: 444 TIAGCKMSKSLKNFITIKEALAKNT-------ARQLRLAFLMHSWKDTLDYSSNTMESA 495



 Score = 48.1 bits (113), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 1/41 (2%)

Query: 45  RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           R  I FD+L R+LR Y+  + V Y  NITDIDDKII+RARQ
Sbjct: 112 RSYISFDILRRILRDYFKYE-VFYCMNITDIDDKIIKRARQ 151


>gi|71894372|ref|YP_278480.1| cysteinyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851160|gb|AAZ43769.1| cysteinyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 406

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 208/431 (48%), Gaps = 41/431 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVYD  HIGN RP++ FD++ +  RY   +K   ++ NITDIDDKII +A++
Sbjct: 2   LKIYVCGPTVYDELHIGNMRPILTFDLMLKAARYL--KKDFIFIHNITDIDDKIIFKAKE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           ++ S         +  K +Q+++      +    T     T ++  +   +  +    +A
Sbjct: 60  QNISEK------ELAQKYSQKYLNHLKTFSVDTITKLEYVTKNLEYIESFLDKLYKRDNA 113

Query: 146 YEANNE-IIFDTS-SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y   N  + F+   ++ NYG  S + +D+      +  K  K N ADF LWK +T     
Sbjct: 114 YLIENSGLYFNVEKNLNNYGKISNQNLDDMHFDFDLNSKLQKYNKADFALWK-NTSEGIK 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           ++S +G+GRPGWH EC A+     G    DIHGGG+DLIFPHHENE  Q     + + T 
Sbjct: 173 FDSKFGQGRPGWHTECVALIEKNFGDSQLDIHGGGVDLIFPHHENENIQYQALYQKDITK 232

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             W+ +G +NL   KMSKS  N I+++  LE             ++   LM+     I+ 
Sbjct: 233 K-WLRSGQINLNNEKMSKSLQNIISVDAFLENN-------SGNTLKFIFLMSSLTANINL 284

Query: 323 TVQRLTEAEILLSKWPQTSTSKGI----IDPAVLS---ALYNDLNTVSAIQALHKLARES 375
               +++A  L  K  + S    +    I P  +S       +L+    +  ++ L + +
Sbjct: 285 NENLISDASNLDKKLIKLSFLAKVNNLEIKPCDVSKEMEFLFELSFSKFMFEVNALLKNA 344

Query: 376 TKN-----HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
            KN     + LL +FN     LG    K   +  I     +  ++    L++K + SAD 
Sbjct: 345 NKNDLEALNKLLFLFNT----LGFSYNKLDFSSEI-----QTYKKWKAALELKDYKSADL 395

Query: 431 IRKQLESKGFI 441
           +R+ L  K  I
Sbjct: 396 LREDLLKKNLI 406


>gi|20988543|gb|AAH30473.1| Cars protein [Mus musculus]
          Length = 671

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 144 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 203

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 204 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 263

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 264 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 323

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 324 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 375


>gi|116670715|ref|YP_831648.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|310947173|sp|A0JWX8|MSHC_ARTS2 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|116610824|gb|ABK03548.1| Cysteine--tRNA ligase [Arthrobacter sp. FB24]
          Length = 426

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 202/426 (47%), Gaps = 52/426 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++I++T    +  +  +D +  + +YVCG T YD  H+G+A   + FD+L R  R   G 
Sbjct: 19  VRIFDT---AVGAYSTLDATGEQSLYVCGITPYDATHMGHAASYVAFDLLNRAWRD--GG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + V YV+N+TD+DD ++ERA      +   D    + +   + F  D   L  LAP H  
Sbjct: 74  QRVAYVQNVTDVDDPLLERATAT--GVDWRD----LAASQIELFQTDMAALNVLAPDHYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSR--------R 168
            A   IP+++  I+ ++  G AY       E + ++ +D  +   + + ++         
Sbjct: 128 GAVESIPEIVPAIERLLHLGLAYRVTGTPGEPDGDVYYDVEAASKHSAEAKDAWTLGSVS 187

Query: 169 KIDEQKMGTRV------PEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSA 221
            + E +M          P +  K+   D +LW+ +   EP W     G GRPGWHIEC+ 
Sbjct: 188 GLSETEMLELFAERGGDPGRRGKRQALDPLLWRVARDGEPSWAGGELGSGRPGWHIECTV 247

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           ++  YL   F + GGG DLIFPHHE     +     +   A  + H G + L+G KMSKS
Sbjct: 248 IAQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLTGV-PLARHFAHAGMVGLDGEKMSKS 306

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GN + +++L    +      PA  IRLA+L  HYR    +T     +A+  L++W    
Sbjct: 307 KGNLVLVSKLRAAGEE-----PA-AIRLAILAHHYRTDWSWTEAGFAQAKTRLAEWRDAL 360

Query: 342 T-----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------DLLPIFNASAH 390
           T     S   +   + S L NDLN   A+ A+ + A  + +        D   + +A   
Sbjct: 361 TMAPGESAATLIAEMRSELANDLNAPGALAAVDRWAVAAKQQAGAGSPMDQALVSDAVNA 420

Query: 391 ILGIEV 396
           +LG+E+
Sbjct: 421 LLGVEL 426


>gi|157821465|ref|NP_001099789.1| cysteinyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|149061784|gb|EDM12207.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 748

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 221 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 280

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 281 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 340

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 341 RPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 400

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 401 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNY 110


>gi|229820734|ref|YP_002882260.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Beutenbergia cavernae DSM 12333]
 gi|310947174|sp|C5BVB1|MSHC_BEUC1 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|229566647|gb|ACQ80498.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Beutenbergia cavernae DSM 12333]
          Length = 420

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/383 (30%), Positives = 180/383 (46%), Gaps = 46/383 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++++ +T   ++T   A       MYVCG T YD  H+G+A   + FD+L R  R    
Sbjct: 20  REVRVRDTATGELT--PAGHDGRASMYVCGITPYDSTHLGHANTYVSFDLLVRAWRD--A 75

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLACLA 118
              VTYV+N+TD+DD ++ERA           A  +    + +   + F  D   L  +A
Sbjct: 76  GLAVTYVQNVTDVDDPLLERAA----------ATGVDWRQLAADQIELFHHDMVALRVVA 125

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNE--------IIFDTSSIPNYGSFSRRKI 170
           P H   A   +P ++  ++ ++    AY             +    S+ P +GS     +
Sbjct: 126 PEHYIGAVESVPDVVRAVERMLADRAAYRVGAAADGAGDGDVYAALSADPRFGSLG--SL 183

Query: 171 DEQKM----GTRV--PEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMS 223
           DE +M    G R   P++  K+ P D +LW+     EP W     GRGRPGWHIEC+ ++
Sbjct: 184 DEAEMLELFGERGGDPDRLGKQAPLDPLLWRVEREEEPSWPGESLGRGRPGWHIECATIA 243

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           + +LG  FD+ GGG DL FPHHE   +           A   +H G +  +G KMSKS G
Sbjct: 244 ARFLGVPFDVQGGGTDLEFPHHEMSESHLRVLTATAHPARAHVHGGMVAYQGHKMSKSRG 303

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQ 339
           N + ++EL+ +            +RL +L  HY E  ++    L  AE  L+ W     Q
Sbjct: 304 NLVFVSELVASGV------DPMAVRLVILAHHYAEDWEYEAGALGLAEERLATWRAALAQ 357

Query: 340 TSTSKGI-IDPAVLSALYNDLNT 361
            S   G  +   V +AL NDL+ 
Sbjct: 358 GSGPSGADVVAGVRAALANDLDA 380


>gi|307210717|gb|EFN87140.1| Cysteinyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 729

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 187/428 (43%), Gaps = 127/428 (29%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIV-------------FD 51
           +++YN+L RK   F     + I  Y CGPTVYD +H+G+AR  I              +D
Sbjct: 20  LQLYNSLTRKKEVFVPQFGNRILWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFGYD 79

Query: 52  VLY-------------RLLRYYYGEKCV---------------------TYVRNITDIDD 77
           VLY             R  + Y  EK V                       V  ITD+D 
Sbjct: 80  VLYVMNITDIDDKIIKRARQNYLYEKYVEENHNLNTILDDAKQVMSNFENTVHTITDLDK 139

Query: 78  K------------IIE------RARQEHPSIPINDAI-----------------SIITSK 102
           K            +IE      R + EH    + + +                 S IT  
Sbjct: 140 KCMLENMLSKLTKVIENLEKAVREKDEHEIAVLQELLLKEVKDLLSDWLDQLKGSTITEH 199

Query: 103 NT---------QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           +           +F KD   L  L P+   R + ++P++I  +Q II +G AY +N  + 
Sbjct: 200 SIFNKLSKHWESEFHKDMDALNVLKPSVLTRVSEYVPEIIAFVQQIIDNGLAYGSNGSVY 259

Query: 154 FDTSSIPNYGSFSRRKIDEQK---MGTRVPEKY---------------HKKNPADFILWK 195
           FD S           K D+Q+       VPE Y                K++  DF LWK
Sbjct: 260 FDVS-----------KFDKQEKHFYAKLVPEAYGDTSSDLSVTEDKLSEKRSLTDFALWK 308

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
            S   EP W+SPWG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQ+   
Sbjct: 309 SSKAGEPWWDSPWGKGRPGWHIECSVMASVICGENLDIHTGGVDLKFPHHDNELAQAEAY 368

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                    ++H+G L + G KMSKS  NF+TI + L  KK   R      +RLA L+  
Sbjct: 369 FDNSHWVKYFLHSGHLTIAGCKMSKSLKNFVTIQDAL--KKHSARQ-----LRLAFLLHS 421

Query: 316 YREPIDFT 323
           +++ +D++
Sbjct: 422 WKDTLDYS 429


>gi|149061783|gb|EDM12206.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 831

 Score =  176 bits (446), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 304 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 363

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 424 RPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 484 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNY 193


>gi|213401855|ref|XP_002171700.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999747|gb|EEB05407.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 766

 Score =  176 bits (446), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 97/233 (41%), Positives = 130/233 (55%), Gaps = 20/233 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSF 165
           F KD   L  L PT   R + ++P+++  ++ II  G+AY   +  + FDT +    G F
Sbjct: 232 FNKDMRALNVLPPTVVTRVSEYMPEIVDFVKKIIERGYAYAVEDGSVYFDTEAFSAAGHF 291

Query: 166 ----------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
                     +R  IDE +    +  +  KK P DF LWK S   EP W+SPWG+GRPGW
Sbjct: 292 YAKIEPWNKNNRELIDEGEGA--LAARTGKKRPGDFALWKASKSGEPFWDSPWGKGRPGW 349

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIECS M+   LG   DIH GG+DL FPHH+NE+AQS       +  N + H G L++EG
Sbjct: 350 HIECSVMAGTILGSNIDIHSGGIDLAFPHHDNELAQSEAFFDCPQWINYFFHMGHLHIEG 409

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           +KMSKS  NFITI E+L  KK+  R      +RLA L+  +   +DF    LT
Sbjct: 410 QKMSKSLKNFITIKEIL--KKYTARQ-----LRLAFLLQQWNTQMDFKDALLT 455



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 56/80 (70%), Gaps = 1/80 (1%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           +N++    T F A +  ++  Y CGPTVYD +H+G+AR  +  D+L R+L+ Y+    +T
Sbjct: 24  FNSMTHTKTPFIAPNGHSLTWYCCGPTVYDASHMGHARNYVTTDILRRILQNYFNYD-IT 82

Query: 68  YVRNITDIDDKIIERARQEH 87
           +V+N+TDIDDKII RARQ++
Sbjct: 83  FVQNVTDIDDKIIVRARQKY 102


>gi|281425990|ref|ZP_06256903.1| cysteine--tRNA ligase [Prevotella oris F0302]
 gi|281399883|gb|EFB30714.1| cysteine--tRNA ligase [Prevotella oris F0302]
          Length = 421

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 134/414 (32%), Positives = 197/414 (47%), Gaps = 51/414 (12%)

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DDKI ++AR E    P+      I    T ++      L  L P+ +P AT HI +   L
Sbjct: 9   DDKIEKKARLEQLE-PME-----IAQYYTNRYHAAMEALNVLPPSIEPHATGHIIEQEEL 62

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKMGTRVPEKY-HKKNPADF 191
           ++ I+ +G+AYE+N  I FD         YG  S R + +    +R  +    KKN  DF
Sbjct: 63  VKEILKNGYAYESNGSIYFDVEKYDKEHKYGILSGRNLTDMINNSRELQGVGEKKNQVDF 122

Query: 192 ILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
            LWK++ P     W SPW  G PGWH EC+AM   YLG  FDIHGGG+DLIFPHHE EIA
Sbjct: 123 ALWKKAQPEHIMRWPSPWSIGFPGWHCECTAMGRKYLGSHFDIHGGGMDLIFPHHECEIA 182

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG-GRSWPAPVIRL 309
           Q+  A + ++  + W+HN  + + G+KM KS GNFIT+ +          +++    IR 
Sbjct: 183 QA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNFITLEQFFTGNHASLTQAYTPMTIRF 241

Query: 310 AMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAVLS------ 353
            +L  HYR  +DF+           +RL  A   L + P +S      D  V +      
Sbjct: 242 FILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDLERVPVSSHCDAKTDKFVRTFRQRCY 301

Query: 354 -ALYNDLNTVSAIQALHKLAR--ESTKNH-------------DLLPIFNASAHILGIEVC 397
            A+ +DL T   I  L +      +  +H             D + +F  +  +LG++  
Sbjct: 302 EAMNDDLQTPLVISYLFEACHLINTLLDHKAEICADCLKELGDAMKLF--AFDLLGLKNE 359

Query: 398 KEHLNKNISIAIEKLVQERLILLKM----KKFSSADYIRKQLESKGFILEDYKN 447
           K   N     A  K+V   L L       K ++++D IR  L + GF ++D K+
Sbjct: 360 KGDNNVAREEAYGKVVDMVLDLRAKAKADKDWTTSDKIRDALAAAGFEVKDTKD 413


>gi|289803124|ref|ZP_06533753.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 294

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/301 (37%), Positives = 157/301 (52%), Gaps = 39/301 (12%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FPH
Sbjct: 8   KRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 67

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + A
Sbjct: 68  HENEIAQSTCAHDGEYV-NYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDA 119

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG-----IIDPAVLSAL 355
             +R  ++  HYR  ++++ + L +A    E L +    T  S         +   + A+
Sbjct: 120 ETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAM 179

Query: 356 YNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISI------ 407
            +D NT  A   L  +ARE    K  D+      ++H+  I      L +   +      
Sbjct: 180 NDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGA 239

Query: 408 --------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                    IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W++
Sbjct: 240 QADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWRR 293

Query: 460 K 460
           K
Sbjct: 294 K 294


>gi|187468988|gb|AAI66707.1| Cars protein [Rattus norvegicus]
          Length = 655

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 221 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 280

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 281 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 340

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 341 RPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 400

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 401 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNY 110


>gi|74183161|dbj|BAE22530.1| unnamed protein product [Mus musculus]
          Length = 831

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 304 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 363

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 424 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 484 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNY 193


>gi|195122821|ref|XP_002005909.1| GI18835 [Drosophila mojavensis]
 gi|193910977|gb|EDW09844.1| GI18835 [Drosophila mojavensis]
          Length = 740

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 136/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           +F  D   L  L P    R + ++PQ++  IQ II +G AYEAN  + FD +        
Sbjct: 214 KFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGLAYEANGSVYFDVNGFDKRDKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG  +  +  E  +         K++  DF LWK S   EP W+SPWGRGR
Sbjct: 274 HYAKLVPEAYGDTASLQEGEGDLSVTEDRLSEKRSANDFALWKASKAGEPWWDSPWGRGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G +FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQSEAAFGESEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 YEKFLNEF 454



 Score = 99.4 bits (246), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 63/84 (75%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YN+L R+  EF  +D +N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 19  QLKLYNSLTRQKEEFVPLDGNNVKWYSCGPTVYDASHMGHARSYISFDILRRILADYFGY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV NITDIDDKII+RARQ H
Sbjct: 79  N-IHYVMNITDIDDKIIKRARQYH 101


>gi|157074020|ref|NP_001096719.1| cysteinyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|133777443|gb|AAI14706.1| CARS protein [Bos taurus]
 gi|296471434|gb|DAA13549.1| cysteinyl-tRNA synthetase [Bos taurus]
          Length = 832

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT    N    
Sbjct: 306 EFHKDMEALNVLPPDVLTRVSEYVPEIVDFVQKIVDNGYGYASNGSVYFDTVKFANTEGH 365

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +QK        +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 366 SYGKLVPEAVGDQKALHEGEGDLSVSAERLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 425

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 426 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 485

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 486 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSANTMESA 536



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/82 (51%), Positives = 57/82 (69%), Gaps = 1/82 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R+   F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 112 QLRLYNSLTRRKDVFVPQDGRRVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-K 170

Query: 64  KCVTYVRNITDIDDKIIERARQ 85
             V Y  NITDIDDKII+RARQ
Sbjct: 171 FDVFYCMNITDIDDKIIKRARQ 192


>gi|148747198|ref|NP_038770.3| cysteinyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|47117033|sp|Q9ER72|SYCC_MOUSE RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|11191806|emb|CAC16403.1| CysRS protein [Mus musculus]
 gi|32493323|gb|AAH54717.1| Cysteinyl-tRNA synthetase [Mus musculus]
 gi|37748375|gb|AAH58954.1| Cysteinyl-tRNA synthetase [Mus musculus]
          Length = 831

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 304 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 363

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 424 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 484 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNY 193


>gi|26328991|dbj|BAC28234.1| unnamed protein product [Mus musculus]
          Length = 831

 Score =  176 bits (445), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 304 EEFHKDKEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 363

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 424 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 484 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 86.3 bits (212), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNY 193


>gi|11191800|emb|CAC16398.1| Cysteinyl-tRNA-synthetase [Mus musculus domesticus]
 gi|148686272|gb|EDL18219.1| cysteinyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 831

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 304 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 363

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 424 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 484 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNY 193


>gi|26332072|dbj|BAC29766.1| unnamed protein product [Mus musculus]
 gi|74225237|dbj|BAE31556.1| unnamed protein product [Mus musculus]
          Length = 748

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 221 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 280

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 281 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 340

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 341 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 400

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 401 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNY 110


>gi|148686274|gb|EDL18221.1| cysteinyl-tRNA synthetase, isoform CRA_c [Mus musculus]
          Length = 748

 Score =  176 bits (445), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 221 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 280

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 281 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 340

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 341 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 400

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 401 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNY 110


>gi|26346422|dbj|BAC36862.1| unnamed protein product [Mus musculus]
          Length = 649

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 221 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 280

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 281 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 340

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 341 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 400

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 401 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNY 110


>gi|195488337|ref|XP_002092271.1| GE11760 [Drosophila yakuba]
 gi|194178372|gb|EDW91983.1| GE11760 [Drosophila yakuba]
          Length = 741

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/256 (38%), Positives = 136/256 (53%), Gaps = 39/256 (15%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSF 165
           QF  D   L  L P    R + ++PQ++  IQ II +G AY ANN + FD +       F
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYAANNSVYFDVNG------F 267

Query: 166 SRRKIDEQKMGTRVPEKY---------------------HKKNPADFILWKRSTPMEPGW 204
            +R  D+      VPE Y                      K++  DF LWK S   EP W
Sbjct: 268 DKR--DKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWW 325

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           +SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    
Sbjct: 326 DSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKY 385

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF-- 322
           ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+  
Sbjct: 386 FLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSE 438

Query: 323 -TVQRLTEAEILLSKW 337
            T++  T+ E  L+++
Sbjct: 439 NTMEMATQYEKFLNEF 454



 Score = 97.1 bits (240), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + YV NITDIDDKII RARQ H
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNH 101


>gi|302782427|ref|XP_002972987.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
 gi|300159588|gb|EFJ26208.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
          Length = 457

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 11/237 (4%)

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI 159
            S+  ++F +D   L    P    R T++I +++  ++ II +G+AYE +  + FDT + 
Sbjct: 187 ASRYEKEFFEDMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAYEVDGSVYFDTEAF 246

Query: 160 PN---YGSFSRRKIDEQKMGTRVPEKY---HKKNPADFILWKRSTPMEPGWESPWGRGRP 213
                YG  +   +    + +     +   +KKN  DF LWK S   EP W+SPWG GRP
Sbjct: 247 NTKHTYGKLNPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVGEPFWDSPWGPGRP 306

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+S  +G++ DIH GG DL FPHH+NE+AQ+       +  N + H+G L++
Sbjct: 307 GWHIECSAMASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQWVNYFFHSGHLSV 366

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NF TI + LE   +         +RL  L+  + +P+DF+   ++EA
Sbjct: 367 NGLKMSKSLKNFTTIRQALEELHYSSSQ-----LRLLFLLHQWDKPMDFSASAMSEA 418



 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
          +  Y+CGPTVYD +HIG+AR  + FD+L R+L  ++G   V YV N+TD+DDKII+RAR+
Sbjct: 23 VTWYICGPTVYDSSHIGHARNYVTFDILRRILEDFFGYD-VFYVMNVTDVDDKIIKRARR 81

Query: 86 EH 87
          +H
Sbjct: 82 DH 83


>gi|157865847|ref|XP_001681630.1| cysteinyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68124928|emb|CAJ02484.1| putative cysteinyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 784

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 131/242 (54%), Gaps = 17/242 (7%)

Query: 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-- 159
           K  + F +D  RL    P    R T ++PQ++  +Q II +G AY     + FDT +   
Sbjct: 238 KYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNGFAYAGETSVFFDTEAYIR 297

Query: 160 -----PNYGSFSRRKIDEQKM--GTRVPEKY---HKKNPADFILWKRSTPMEPGWESPWG 209
                P       R   E +M  G  V  K     K++P DF LWK S P EP W SPWG
Sbjct: 298 AGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEGEKRSPNDFALWKFSKPGEPRWPSPWG 357

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECS M+S  LG+  DIH GG DL FPHH+NE AQS   +   +  N ++H G
Sbjct: 358 EGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQSEACNLHSQWVNYFLHCG 417

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L+++G KMSKS  NFITI + L+      R+     +RL  L   + +P++F+ Q L E
Sbjct: 418 HLHIKGLKMSKSLKNFITIRQALDELGVTART-----MRLLFLANPWNKPMNFSDQSLDE 472

Query: 330 AE 331
           A+
Sbjct: 473 AK 474



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G  
Sbjct: 38  LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMEDYFG-Y 96

Query: 65  CVTYVRNITDIDDKIIERAR 84
            V Y  NITDIDDKII+RAR
Sbjct: 97  SVIYQMNITDIDDKIIKRAR 116


>gi|326436995|gb|EGD82565.1| cysteinyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 708

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 17/245 (6%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            S ++ K   +F +D   L   AP    R T  +P++   +Q II +G+ YEAN  + FD
Sbjct: 186 FSSVSRKWEAEFHRDMNALNVEAPDVLKRVTECVPEIAAFVQRIIDNGYGYEANGSVYFD 245

Query: 156 T-----SSIPNYGSF-----SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
                 SS  NY        +  K  E+  G        K++ +DF LWK S P EP W 
Sbjct: 246 VAAFRGSSEHNYPKLLPEAAANAKALEEGEGALSSGAGDKRSQSDFALWKASKPGEPAWP 305

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG+GRPGWHIECS M+S  L    DIH GG+DL FPHH+NE AQS      +K  N +
Sbjct: 306 SPWGQGRPGWHIECSVMASSVLNDNMDIHSGGVDLKFPHHDNECAQSEAYYGNDKWVNYF 365

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           IH+G L++EG KMSKS  NFITI E L+        + A  IRL  L+ +++  +D++  
Sbjct: 366 IHSGHLHIEGHKMSKSLKNFITIKEALD-------QYTARQIRLMFLLHNWKATLDYSSH 418

Query: 326 RLTEA 330
            +  A
Sbjct: 419 SMMTA 423



 Score = 84.3 bits (207), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 57/84 (67%), Gaps = 1/84 (1%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          +++++N+  R+   F   + + +  Y CGPTVYD +H+G+AR  I FD++ R+LR Y+  
Sbjct: 8  QLQLFNSYTRQKEVFVPRERNRVTWYGCGPTVYDASHMGHARAYITFDIMRRVLRDYFKY 67

Query: 64 KCVTYVRNITDIDDKIIERARQEH 87
           C  YV NITD+DDKII RARQ H
Sbjct: 68 DC-EYVMNITDLDDKIILRARQNH 90


>gi|322489357|emb|CBZ24616.1| putative cysteinyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 784

 Score =  175 bits (444), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 131/242 (54%), Gaps = 17/242 (7%)

Query: 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-- 159
           K  + F +D  RL    P    R T ++PQ++  +Q II +G AY     + FDT +   
Sbjct: 238 KYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNGFAYVGETSVFFDTEAYIR 297

Query: 160 -----PNYGSFSRRKIDEQKM--GTRVPEKY---HKKNPADFILWKRSTPMEPGWESPWG 209
                P       R   E +M  G  V  K     K++P DF LWK S P EP W SPWG
Sbjct: 298 AGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGVEGEKRSPNDFALWKFSKPGEPRWSSPWG 357

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECS M+S  LG+  DIH GG DL FPHH+NE AQS   +   +  N ++H G
Sbjct: 358 EGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQSEACNLHSQWVNYFLHCG 417

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L+++G KMSKS  NFITI + L+      R+     +RL  L   + +P++F+ Q L E
Sbjct: 418 HLHIKGLKMSKSLKNFITIRQALDELGVTART-----MRLLFLANPWNKPMNFSDQSLDE 472

Query: 330 AE 331
           A+
Sbjct: 473 AK 474



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G  
Sbjct: 38  LKVMNSLTESLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMEDYFG-Y 96

Query: 65  CVTYVRNITDIDDKIIERAR 84
            V Y  NITDIDDKII+RAR
Sbjct: 97  SVIYQVNITDIDDKIIKRAR 116


>gi|195334811|ref|XP_002034070.1| GM21666 [Drosophila sechellia]
 gi|194126040|gb|EDW48083.1| GM21666 [Drosophila sechellia]
          Length = 741

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           QF  D   L  L P    R + ++PQ++  IQ II +G AY ANN + FD +        
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYAANNSVYFDVNGFDKREKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++  DF LWK S   EP W+SPWG+GR
Sbjct: 274 HYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 YEKFLNEF 454



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 19  KLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYFGY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV NITDIDDKII RARQ H
Sbjct: 79  N-IHYVMNITDIDDKIIRRARQNH 101


>gi|302805410|ref|XP_002984456.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
 gi|300147844|gb|EFJ14506.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
          Length = 450

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 133/237 (56%), Gaps = 11/237 (4%)

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI 159
            S+  ++F +D   L    P    R T++I +++  ++ II +G+AYE +  + FDT + 
Sbjct: 180 ASRYEKEFFEDMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAYEVDGSVYFDTEAF 239

Query: 160 PN---YGSFSRRKIDEQKMGTRVPEKY---HKKNPADFILWKRSTPMEPGWESPWGRGRP 213
                YG  +   +    + +     +   +KKN  DF LWK S   EP W+SPWG GRP
Sbjct: 240 NTKHTYGKLNPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVGEPFWDSPWGPGRP 299

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+S  +G++ DIH GG DL FPHH+NE+AQ+       +  N + H+G L++
Sbjct: 300 GWHIECSAMASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQWVNYFFHSGHLSV 359

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NF TI + LE   +         +RL  L+  + +P+DF+   ++EA
Sbjct: 360 NGLKMSKSLKNFTTIRQALEELHYSSSQ-----LRLLFLLHQWDKPMDFSASAMSEA 411



 Score = 79.0 bits (193), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 48/62 (77%), Gaps = 1/62 (1%)

Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
          +  Y+CGPTVYD +HIG+AR  + FD+L R+L  ++G   V YV N+TD+DDKII+RAR+
Sbjct: 16 VTWYICGPTVYDSSHIGHARNYVTFDILRRILEDFFGYD-VFYVMNVTDVDDKIIKRARR 74

Query: 86 EH 87
          +H
Sbjct: 75 DH 76


>gi|294657639|ref|XP_459935.2| DEHA2E14476p [Debaryomyces hansenii CBS767]
 gi|199432842|emb|CAG88179.2| DEHA2E14476p [Debaryomyces hansenii]
          Length = 780

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/265 (38%), Positives = 145/265 (54%), Gaps = 26/265 (9%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI---P 160
           ++F  D  RL  L P+   R + +IP +I  ++ II +G AY   +  + FDT+     P
Sbjct: 250 KKFNDDMGRLNVLPPSITTRVSEYIPDVIEFVEKIITNGFAYATKDGSVYFDTAKFENDP 309

Query: 161 NYGSFSRRKIDEQKM-------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           N+     +  ++  M       G+    +  KKN ADF LWK S P EP W S WG GRP
Sbjct: 310 NHDYAKLQPWNKGDMSLINDGEGSLSTGQDTKKNAADFALWKGSKPGEPSWPSKWGEGRP 369

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L++
Sbjct: 370 GWHIECSVMASDITGQTMDIHSGGVDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLHI 429

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           +G+KMSKS  NFITI E L    F  R      +RL   ++++ +PIDF    + E    
Sbjct: 430 QGQKMSKSLKNFITIEEAL--NDFTSRQ-----LRLVFALSYWEKPIDFKDSLIKE---- 478

Query: 334 LSKWPQTSTSKGIIDPAVLSALYND 358
           +  W ++S SK       + AL ND
Sbjct: 479 VKSW-ESSVSKFF---TTVRALNND 499



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R   EF  +  ++I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G  
Sbjct: 43  LHIYNSLTRSKDEFIPLRNNHITWYCCGPTVYDHSHMGHARNYVSTDICRRILQDYFGYN 102

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V +++N+TDIDDKII  ARQE+
Sbjct: 103 -VKFIQNVTDIDDKIIIAARQEY 124


>gi|295666742|ref|XP_002793921.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226277574|gb|EEH33140.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 820

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/363 (32%), Positives = 177/363 (48%), Gaps = 58/363 (15%)

Query: 67  TYVRNITDI-----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           T+ +N+ D+     D       R E  SI      + +T     +F+KD   L  L P  
Sbjct: 233 TFYKNVQDVLLEHLDSLYGSSIRGEDRSI-----FTKLTKTYEDRFMKDIRDLNVLDPDA 287

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKID 171
             R T ++P+++  ++ I+ H  AY  ++  + FD ++    G S++R         K+ 
Sbjct: 288 VTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQ 347

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G  +     K++PADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  
Sbjct: 348 AEGEGALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQM 407

Query: 232 DIHGGGLDLIFPHHENEIAQS-------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           DIH GG+DL FPHH+NE+AQS       C  D      N ++H G L+++G KMSKS  N
Sbjct: 408 DIHSGGIDLAFPHHDNELAQSEAYWHENCAHDHW---VNYFLHMGHLSIQGSKMSKSLKN 464

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
           F TI E L+   +  RS     +R+  L+  +++ I+ T   +        K        
Sbjct: 465 FTTIREALDKGDWTPRS-----LRIVFLLGGWKDGIEITEDLVKAGNAWEEKANNFFINA 519

Query: 338 ----PQTSTSKGIIDPAVLSAL-------YNDL----NTVSAIQALHKL-ARESTKNHDL 381
                QT++  G  D  + +AL       Y +L    NT  A+ A+ +L ++ +  N   
Sbjct: 520 RDSVAQTNSDAGSTDDTLATALKSAQDAVYQNLCDSFNTAGAMYAISELISKYNISNKST 579

Query: 382 LPI 384
           LP+
Sbjct: 580 LPV 582



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYFN 85

Query: 63  EKCVTYVRNITDIDDKI 79
              V ++ NITD+DDK+
Sbjct: 86  FD-VQFIMNITDVDDKV 101


>gi|171682892|ref|XP_001906389.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941405|emb|CAP67056.1| unnamed protein product [Podospora anserina S mat+]
          Length = 843

 Score =  175 bits (443), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/240 (38%), Positives = 128/240 (53%), Gaps = 21/240 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T +  + F  D   L  L PT   R T ++PQ++  ++ II  G AYEA+  + FD  +
Sbjct: 248 LTQRMEKAFNDDMAALNVLEPTAVTRVTEYVPQIVSFVEQIIQKGFAYEADGSVYFDIGA 307

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKY----------HKKNPADFILWKRSTPMEPGWESPW 208
               G+   R   E +    + E+            KK  ADF LWKRS P EP W SPW
Sbjct: 308 FEKAGNTYARLRPESRNDKALQEEGEGSLSKSSGGQKKRDADFALWKRSKPGEPYWPSPW 367

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS-----CCADRIEKTAN 263
           G+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      C        N
Sbjct: 368 GQGRPGWHIECSVMASDKLGDNMDIHSGGIDLAFPHHDNELAQSEAFFHQCGKGEHTWVN 427

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H G L++ G KMSKS  NF TI + L T      ++ A  +R+  LM  + + ++ +
Sbjct: 428 YFLHMGHLSIAGSKMSKSLKNFQTIQDALAT------TYTARNMRIVFLMGRWNDGVEIS 481



 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/61 (45%), Positives = 43/61 (70%), Gaps = 1/61 (1%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I  Y CGPT YD +H+G+AR  +  D++ R+ + Y+G + V +V N TD+DDKII +AR+
Sbjct: 61  ISWYACGPTTYDLSHLGHARNYLSNDIIRRIFQDYFGYE-VNFVMNYTDVDDKIIIKARR 119

Query: 86  E 86
           +
Sbjct: 120 Q 120


>gi|195583830|ref|XP_002081719.1| GD11166 [Drosophila simulans]
 gi|194193728|gb|EDX07304.1| GD11166 [Drosophila simulans]
          Length = 741

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           QF  D   L  L P    R + ++PQ++  IQ II +G AY ANN + FD +        
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYAANNSVYFDVNGFDKREKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++  DF LWK S   EP W+SPWG+GR
Sbjct: 274 HYAKLVPEAYGDTKSLQEGEGDLSAAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 YEKFLNEF 454



 Score = 96.7 bits (239), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + YV NITDIDDKII RARQ H
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNH 101


>gi|73982653|ref|XP_851224.1| PREDICTED: similar to cysteinyl-tRNA synthetase isoform c isoform 2
           [Canis familiaris]
          Length = 831

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSI 159
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT     S  
Sbjct: 304 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTVKFASSER 363

Query: 160 PNYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 424 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 484 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+G 
Sbjct: 111 KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFGY 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITD+DDKII+RARQ +
Sbjct: 171 D-VFYCMNITDVDDKIIKRARQNY 193


>gi|73982657|ref|XP_533205.2| PREDICTED: similar to cysteinyl-tRNA synthetase isoform b isoform 1
           [Canis familiaris]
          Length = 748

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSI 159
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT     S  
Sbjct: 221 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTVKFASSER 280

Query: 160 PNYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 281 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 340

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 341 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 400

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 401 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+G 
Sbjct: 28  KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFGY 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITD+DDKII+RARQ +
Sbjct: 88  D-VFYCMNITDVDDKIIKRARQNY 110


>gi|71402719|ref|XP_804237.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70867098|gb|EAN82386.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 785

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 162/330 (49%), Gaps = 54/330 (16%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------- 159
           F +D  RL    P    R T ++PQ++  IQ I+ +G AY   + I FDT++        
Sbjct: 246 FFEDMRRLGVRDPDVVSRVTEYVPQVVDFIQKIMDNGFAYRGTSSIFFDTAAFLRAGHDY 305

Query: 160 PNYGSFSRR--------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
           P     S R        ++ E +    V     K+N  DF LWK S P EP W SPWG G
Sbjct: 306 PKLKPVSERGENDATEAEMAEGEGALTVGVAGEKRNANDFALWKFSKPGEPRWPSPWGAG 365

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   D+H GG DL FPHH+NE AQS       +  N ++H G L
Sbjct: 366 RPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDNECAQSEACHMQHQWINYFLHCGHL 425

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
           +++G KMSKS  NFITI + L+      R     V+RL  L  H+ +P++F+ Q + EA 
Sbjct: 426 HIKGLKMSKSLKNFITIRQALDELDVTPR-----VMRLLFLANHWGKPMNFSDQSIEEAK 480

Query: 331 -------------EILLSK--WPQTSTSKGIID-------------PAVLSALYNDLNTV 362
                        +I+L K  W +T   +G+ D              AV  AL N+ +T 
Sbjct: 481 ERERVLRAFFGSVDIVLRKDNWGKT---QGLNDHDRRLQETWLTAENAVHGALQNNFDTP 537

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHIL 392
           +A+ ++  L      NH LL     SA ++
Sbjct: 538 AAMDSVMGLV--GATNHYLLSGERPSATLV 565



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ N+L   +  F   +   +R Y CGPTVY+ +H+G+AR  + FD+L R++  Y+G
Sbjct: 37  KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMEDYFG 96

Query: 63  EKCVTYVRNITDIDDKIIERAR 84
            + V Y  NITDIDDKII+RAR
Sbjct: 97  YQVV-YQMNITDIDDKIIKRAR 117


>gi|195028283|ref|XP_001987006.1| GH21680 [Drosophila grimshawi]
 gi|193903006|gb|EDW01873.1| GH21680 [Drosophila grimshawi]
          Length = 743

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/248 (39%), Positives = 135/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           +F  D   L  L P    R + ++PQ++  IQ II +  AYEAN  + FD +        
Sbjct: 215 KFHNDMKSLNILPPDVLTRVSEYVPQIVEFIQRIIDNKLAYEANGSVYFDVNGFDKREKH 274

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++P DF LWK S   EP W+SPWGRGR
Sbjct: 275 HYAKLVPEAYGDTQSLQEGEGDLSVTEERLSEKRSPNDFALWKTSKAGEPWWDSPWGRGR 334

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 335 PGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHLT 394

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NFITI E L TK        A  +RLA L+  +++ +D+   T++  T+
Sbjct: 395 IAGCKMSKSLKNFITIQEAL-TKH------SATQLRLAFLLHSWKDTLDYSENTMEMATQ 447

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 448 FEKFLNEF 455



 Score = 94.7 bits (234), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 62/84 (73%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R+   F  ++ +N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 20  QLRLYNSLTRQKETFVPLEGNNVKWYSCGPTVYDASHMGHARSYISFDILRRILANYFGY 79

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV NITDIDDKII+RARQ H
Sbjct: 80  N-IQYVMNITDIDDKIIKRARQYH 102


>gi|225683481|gb|EEH21765.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 792

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/360 (32%), Positives = 174/360 (48%), Gaps = 52/360 (14%)

Query: 67  TYVRNITDI-----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           T+ +N+ D+     D       R E  SI      + +T     +F+KD   L  L P  
Sbjct: 195 TFYKNVQDVLLEHLDSLYGSSIRGEDRSI-----FTKLTKTYEDRFMKDIRDLNVLDPDA 249

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKID 171
             R T ++P+++  ++ I+ H  AY  ++  + FD ++    G S++R         K+ 
Sbjct: 250 VTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQ 309

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G  +     K++PADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  
Sbjct: 310 AEGEGALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQM 369

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI----HNGFLNLEGRKMSKSNGNFIT 287
           DIH GG+DL FPHH+NE+AQS          N W+    H G L+++G KMSKS  NF T
Sbjct: 370 DIHSGGIDLAFPHHDNELAQSEAYWHENSAQNHWVNYFLHMGHLSIQGSKMSKSLKNFTT 429

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------- 337
           I E L+   +  RS     +R+  L+  +++ I+ T   +        K           
Sbjct: 430 IREALDKGDWNPRS-----LRIVFLLGGWKDGIEITEDLVKAGNAWEEKANNFFINARDS 484

Query: 338 -PQTSTSKGIIDPAVLSAL-------YNDL----NTVSAIQALHKL-ARESTKNHDLLPI 384
             Q ++  G  D  + +AL       Y +L    NT  A+ A+ +L ++ +  N   LP+
Sbjct: 485 VAQANSDAGSTDDTLATALKSAQDAVYQNLCDSFNTAGAMHAISELISKYNISNKSTLPV 544



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYFN 85

Query: 63  EKCVTYVRNITDIDDKI 79
              V ++ NITD+DDK+
Sbjct: 86  FD-VQFIMNITDVDDKV 101


>gi|301791662|ref|XP_002930799.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Ailuropoda melanoleuca]
          Length = 832

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN--- 161
           ++F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +   
Sbjct: 305 EEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFASSER 364

Query: 162 --YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
             YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 365 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 424

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 425 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 484

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 485 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 536



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 112 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLRGYFGY 171

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITD+DDKII RARQ +
Sbjct: 172 D-VLYCMNITDVDDKIIRRARQNY 194


>gi|321399071|emb|CBZ08414.1| putative cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322497350|emb|CBZ32425.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 784

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 131/242 (54%), Gaps = 17/242 (7%)

Query: 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-- 159
           K  + F +D  RL    P    R T ++PQ++  +Q II +G AY     + FDT +   
Sbjct: 238 KYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNGFAYVGETSVFFDTEAYIR 297

Query: 160 -----PNYGSFSRRKIDEQKM--GTRVPEKY---HKKNPADFILWKRSTPMEPGWESPWG 209
                P       R   E +M  G  V  K     K++P DF LWK S P EP W SPWG
Sbjct: 298 AGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEGEKRSPNDFALWKFSKPGEPRWPSPWG 357

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECS M+S  LG+  DIH GG DL FPHH+NE AQS   +   +  N ++H G
Sbjct: 358 EGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQSEACNLHSQWVNYFLHCG 417

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L+++G KMSKS  NFITI + L+      R+     +RL  L   + +P++F+ Q L E
Sbjct: 418 HLHIKGLKMSKSLKNFITIRQALDELGVTART-----MRLLFLANPWNKPMNFSDQSLDE 472

Query: 330 AE 331
           A+
Sbjct: 473 AK 474



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G  
Sbjct: 38  LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRVMEDYFG-Y 96

Query: 65  CVTYVRNITDIDDKIIERAR 84
            V Y  NITDIDDKII+RAR
Sbjct: 97  SVIYQMNITDIDDKIIKRAR 116


>gi|301791660|ref|XP_002930798.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Ailuropoda melanoleuca]
          Length = 831

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN--- 161
           ++F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +   
Sbjct: 304 EEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFASSER 363

Query: 162 --YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
             YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 424 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 483

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 484 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 111 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLRGYFGY 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITD+DDKII RARQ +
Sbjct: 171 D-VLYCMNITDVDDKIIRRARQNY 193


>gi|328351033|emb|CCA37433.1| cysteinyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 741

 Score =  174 bits (442), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/235 (39%), Positives = 134/235 (57%), Gaps = 17/235 (7%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII------FDTSS 158
           Q++ +D  RL  L  T   R + ++P+++  +Q II  G+AY   +  +      FDT+ 
Sbjct: 215 QRYDEDMERLNILPATVTTRVSEYVPEIVEFVQGIIDRGYAYVTKDGSVYFDTTQFDTNE 274

Query: 159 IPNYGS---FSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
             +Y     +++  ++  K G   +     K+N ADF LWK S P EP W+SPWG+GRPG
Sbjct: 275 KHDYAKLQPWNKADLELLKEGEGSLSSNDGKRNSADFALWKSSKPGEPSWKSPWGQGRPG 334

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++H G L++E
Sbjct: 335 WHIECSVMASDITGESMDIHSGGIDLAFPHHDNELAQSEARFDCKQWVNYFLHTGHLHIE 394

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           G+KMSKS  NFITI+E L   K+  R      +RL   +  +   +DF    L E
Sbjct: 395 GQKMSKSLKNFITIDEAL--SKYSARQ-----LRLCFALVQWNNQLDFKESLLNE 442



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          +K++N+L R    F   + + +  Y CGPTVYD +H+G+AR  +  D+  R+L+ ++G  
Sbjct: 18 LKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMGHARNYVTIDINRRILQDFFGYN 77

Query: 65 CVTYVRNITDIDDKIIERARQEH 87
           + +V+N+TDIDDKII +ARQE+
Sbjct: 78 -IKFVQNVTDIDDKIILKARQEY 99


>gi|194882631|ref|XP_001975414.1| GG20575 [Drosophila erecta]
 gi|190658601|gb|EDV55814.1| GG20575 [Drosophila erecta]
          Length = 741

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           QF  D   L  L P    R + ++PQ++  IQ II +G AY ANN + FD +        
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYAANNSVYFDVNGFDKREKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++  DF LWK S   EP W+SPWG+GR
Sbjct: 274 HYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNEAEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 YEKFLNEF 454



 Score = 97.1 bits (240), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 61/84 (72%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 19  KLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYFGY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV NITDIDDKII RARQ H
Sbjct: 79  N-IHYVMNITDIDDKIIRRARQNH 101


>gi|58393703|ref|XP_320253.2| AGAP012283-PA [Anopheles gambiae str. PEST]
 gi|55234373|gb|EAA00242.2| AGAP012283-PA [Anopheles gambiae str. PEST]
          Length = 743

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 126/230 (54%), Gaps = 20/230 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------- 158
           F KD   L  L P    R + ++PQ++  I+ II +G AYEAN  + FD +         
Sbjct: 215 FHKDMAALNVLQPDVLTRVSEYVPQIVTYIEKIIANGLAYEANGSVYFDVAGFDRREQHH 274

Query: 159 ----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
               +P  YG   + +  E  +         K++  DF LWK S   EP W+SPWGRGRP
Sbjct: 275 YAKLVPEAYGDAKQLQEGEGDLSIGADRLTEKRSANDFALWKSSKAGEPWWDSPWGRGRP 334

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+S   G   DIH GG+DL FPHH+NE+AQS   D   +    ++H G L +
Sbjct: 335 GWHIECSAMASDICGDYLDIHTGGVDLKFPHHDNELAQSEAHDGSAEWVKYFLHTGHLTI 394

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            G KMSKS  NF+TI ++LE          A  +RLA L+  +++ +D++
Sbjct: 395 AGCKMSKSLKNFVTIQQVLEKHT-------ATQLRLAFLLHSWKDTLDYS 437



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ +YN+L R+   F   D  N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 19  KLYLYNSLTRRKELFVPRDGRNVHWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFGY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V YV NITDIDDKII+RARQ H
Sbjct: 79  N-VLYVMNITDIDDKIIKRARQNH 101


>gi|19922364|ref|NP_611087.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
 gi|122087256|sp|Q7KN90|SYCC_DROME RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4972706|gb|AAD34748.1| unknown [Drosophila melanogaster]
 gi|7302987|gb|AAF58057.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
 gi|220943686|gb|ACL84386.1| Aats-cys-PA [synthetic construct]
          Length = 741

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           QF  D   L  L P    R + ++PQ++  IQ II +G AY ANN + FD +        
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAYAANNSVYFDVNGFDKREKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++  DF LWK S   EP W+SPWG+GR
Sbjct: 274 HYAKLVPEAYGDTKSLQEGEGDLSIAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 YEKFLNEF 454



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 45/86 (52%), Positives = 62/86 (72%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + YV NITDIDDKII RARQ H
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNH 101


>gi|281351477|gb|EFB27061.1| hypothetical protein PANDA_021387 [Ailuropoda melanoleuca]
          Length = 823

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN--- 161
           ++F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +   
Sbjct: 296 EEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFASSER 355

Query: 162 --YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
             YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 356 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 415

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 416 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 475

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 476 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 527



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 103 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLRGYFGY 162

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITD+DDKII RARQ +
Sbjct: 163 D-VLYCMNITDVDDKIIRRARQNY 185


>gi|146080697|ref|XP_001464062.1| cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 784

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/242 (40%), Positives = 131/242 (54%), Gaps = 17/242 (7%)

Query: 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-- 159
           K  + F +D  RL    P    R T ++PQ++  +Q II +G AY     + FDT +   
Sbjct: 238 KYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNGFAYVGETSVFFDTEAYIR 297

Query: 160 -----PNYGSFSRRKIDEQKM--GTRVPEKY---HKKNPADFILWKRSTPMEPGWESPWG 209
                P       R   E +M  G  V  K     K++P DF LWK S P EP W SPWG
Sbjct: 298 AGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEGEKRSPNDFALWKFSKPGEPRWPSPWG 357

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECS M+S  LG+  DIH GG DL FPHH+NE AQS   +   +  N ++H G
Sbjct: 358 EGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQSEACNLHSQWVNYFLHCG 417

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L+++G KMSKS  NFITI + L+      R+     +RL  L   + +P++F+ Q L E
Sbjct: 418 HLHIKGLKMSKSLKNFITIRQALDELGVTART-----MRLLFLANPWNKPMNFSDQSLDE 472

Query: 330 AE 331
           A+
Sbjct: 473 AK 474



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G  
Sbjct: 38  LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRVMEDYFG-Y 96

Query: 65  CVTYVRNITDIDDKIIERAR 84
            V Y  NITDIDDKII+RAR
Sbjct: 97  SVIYQMNITDIDDKIIKRAR 116


>gi|195431327|ref|XP_002063694.1| GK15775 [Drosophila willistoni]
 gi|194159779|gb|EDW74680.1| GK15775 [Drosophila willistoni]
          Length = 741

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 140/270 (51%), Gaps = 23/270 (8%)

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           +Q+   I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G
Sbjct: 192 KQKGAQINDNSVFEALPQYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNG 251

Query: 144 HAYEANNEIIFDTSS------------IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            AY AN+ + FD +             +P  YG     +  E  +         K++  D
Sbjct: 252 LAYAANSSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSIAEDRLSEKRSAND 311

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S   EP W+SPWGRGRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+A
Sbjct: 312 FALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDVFGSQFDIHTGGVDLKFPHHDNELA 371

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS  A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA
Sbjct: 372 QSEAAFNEAEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLA 424

Query: 311 MLMTHYREPIDF---TVQRLTEAEILLSKW 337
            L+  +++ +D+   T++  T+ E  L+++
Sbjct: 425 FLLHSWKDTLDYSENTMEMATQYEKFLNEF 454



 Score = 94.0 bits (232), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 61/86 (70%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K++++N+L R+  EF  +  + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RAKLRLFNSLTRQKEEFVPLQGNTVTWYSCGPTVYDASHMGHARSYISFDILRRILSNYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + YV NITDIDDKII+RARQ H
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQNH 101


>gi|73982655|ref|XP_863344.1| PREDICTED: similar to cysteinyl-tRNA synthetase isoform c isoform 3
           [Canis familiaris]
          Length = 827

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSI 159
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT     S  
Sbjct: 300 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTVKFASSER 359

Query: 160 PNYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 360 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 419

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 420 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 479

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 480 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 531



 Score = 86.7 bits (213), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+G 
Sbjct: 111 KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFGY 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITD+DDKII+RARQ +
Sbjct: 171 D-VFYCMNITDVDDKIIKRARQNY 193


>gi|145344518|ref|XP_001416778.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577004|gb|ABO95071.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 746

 Score =  174 bits (441), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 129/242 (53%), Gaps = 17/242 (7%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
           I D    +  +   +F++D   L    P    R + ++ ++I  IQ II  G AYE+N  
Sbjct: 194 IQDGYLTLAHQFEAEFMEDMKSLGVARPDMLTRVSEYVDKVILYIQVIINKGFAYESNGS 253

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKM----------GTRVPEKYHKKNPADFILWKRSTPME 201
           + FD  +     +    K+++  M          G    EK  KK   DF+LWK S   E
Sbjct: 254 VYFDVKAFEAAENHKYGKLNQNAMENITEAMDGEGALEAEKSEKKCDFDFVLWKMSKDGE 313

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           P W SPWG GRPGWHIECSAM S  LG+  DI+GGG+DL FPHHEN++AQS      E+ 
Sbjct: 314 PCWSSPWGMGRPGWHIECSAMCSDILGQSVDINGGGIDLNFPHHENQLAQSEAHYDTEQW 373

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N +IH G L+++G KMSKS  NFITI   L       + + A  IR   L+  + +P++
Sbjct: 374 VNFFIHTGHLHIDGLKMSKSLKNFITIRAAL-------KMYSARQIRFLFLLNQWCDPME 426

Query: 322 FT 323
            T
Sbjct: 427 LT 428



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 52/77 (67%), Gaps = 1/77 (1%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           + NT  +    F+ +  +++  Y+CGPTVYD AH+G+AR  + FDVL R++  Y+G   V
Sbjct: 47  LLNTFTKTKVPFKPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVMMEYFGYD-V 105

Query: 67  TYVRNITDIDDKIIERA 83
            +V N+TDIDDKII RA
Sbjct: 106 RFVMNVTDIDDKIIMRA 122


>gi|170049267|ref|XP_001855148.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167871109|gb|EDS34492.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 738

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/259 (38%), Positives = 135/259 (52%), Gaps = 34/259 (13%)

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           R+E  S+  N     +      +F KD   L  L P    R + ++PQ++  IQ II +G
Sbjct: 191 RKEGSSVSENSIFETLPRYWEDEFHKDMDALNVLPPDVLTRVSEYVPQIVEYIQKIIENG 250

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------------H 184
            AYEAN  + FD +     G  +R K    K+   VPE Y                    
Sbjct: 251 LAYEANGSVYFDVA-----GFDAREKHHYAKL---VPEAYGDAKSLQEGEGDLSGDQSSE 302

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK S   EP W+SPWGRGRPGWHIECSAM+S   G   DIH GG+DL FPH
Sbjct: 303 KRSANDFALWKCSKAGEPWWDSPWGRGRPGWHIECSAMASDICGDFLDIHTGGVDLKFPH 362

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NE+AQS   D   +    ++H G L + G KMSKS  NF+TI + L+          A
Sbjct: 363 HDNELAQSEAHDNSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQALQKHT-------A 415

Query: 305 PVIRLAMLMTHYREPIDFT 323
             +RLA L+  +++ +D++
Sbjct: 416 TQLRLAFLLHSWKDTLDYS 434



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R+   F   D  N+R Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 20  RLRLYNSLTRQKELFVPRDGRNVRWYSCGPTVYDASHMGHARSYISFDILRRVLTDYFGF 79

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V YV NITDIDDKII+RARQ +
Sbjct: 80  N-VLYVMNITDIDDKIIKRARQNY 102


>gi|254567071|ref|XP_002490646.1| Essential protein of unknown function [Pichia pastoris GS115]
 gi|238030442|emb|CAY68366.1| Essential protein of unknown function [Pichia pastoris GS115]
          Length = 761

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 92/236 (38%), Positives = 134/236 (56%), Gaps = 17/236 (7%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII------FDTSS 158
           Q++ +D  RL  L  T   R + ++P+++  +Q II  G+AY   +  +      FDT+ 
Sbjct: 235 QRYDEDMERLNILPATVTTRVSEYVPEIVEFVQGIIDRGYAYVTKDGSVYFDTTQFDTNE 294

Query: 159 IPNYGS---FSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
             +Y     +++  ++  K G   +     K+N ADF LWK S P EP W+SPWG+GRPG
Sbjct: 295 KHDYAKLQPWNKADLELLKEGEGSLSSNDGKRNSADFALWKSSKPGEPSWKSPWGQGRPG 354

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++H G L++E
Sbjct: 355 WHIECSVMASDITGESMDIHSGGIDLAFPHHDNELAQSEARFDCKQWVNYFLHTGHLHIE 414

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           G+KMSKS  NFITI+E L   K+  R      +RL   +  +   +DF    L E 
Sbjct: 415 GQKMSKSLKNFITIDEAL--SKYSARQ-----LRLCFALVQWNNQLDFKESLLNEV 463



 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R    F   + + +  Y CGPTVYD +H+G+AR  +  D+  R+L+ ++G  
Sbjct: 38  LKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMGHARNYVTIDINRRILQDFFGYN 97

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            + +V+N+TDIDDKII +ARQE+
Sbjct: 98  -IKFVQNVTDIDDKIILKARQEY 119


>gi|269795398|ref|YP_003314853.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|310947217|sp|D1BHU9|MSHC_SANKS RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|269097583|gb|ACZ22019.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 425

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 180/385 (46%), Gaps = 47/385 (12%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           A +  +  +YVCG T YD  HIG+A   + FD+L R  R     + VTY  N+TD+DD +
Sbjct: 32  AAEGPSASLYVCGITPYDATHIGHAATYVAFDLLGRAWRD--AGQQVTYASNVTDVDDPL 89

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           +ERA      +   D    +  + T  F +D T L  + P     A   IP +   ++ +
Sbjct: 90  LERATAT--GVEWQD----LAVEQTALFAEDMTALGVVPPDVYLGAVETIPPVAAAVEEL 143

Query: 140 ILHGHAYE------------ANNEIIFDTSSIPNYGSFSRRKIDEQKM-------GTRVP 180
           +  G AY             A  ++  D ++   +G  SR  +DE  M       G   P
Sbjct: 144 VAAGAAYRVPLEEGAGGDAPALGDVYADVTADSAFGQVSR--MDEATMLELFAERGGD-P 200

Query: 181 EKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +  K+N  D +LW+R  P EP WE+   G GRPGWHIEC+ ++   LG  FD+ GGG D
Sbjct: 201 GRAGKRNALDPLLWRRERPGEPAWEAGSLGTGRPGWHIECAVIARAGLGLPFDVQGGGSD 260

Query: 240 LIFPHHENEIAQS---CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           L+FPHHE   + +      D     A   +H G +  +G KMSKS GN + ++ L     
Sbjct: 261 LLFPHHEMSTSHARLIGDGDVHGVGAATHVHAGLVGYQGEKMSKSRGNLVFVSRLRAEGV 320

Query: 297 FGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PA 350
                   P+ IRLA+L  HYR   ++T   LTE       W    +  G  D       
Sbjct: 321 -------EPMAIRLALLAHHYRSDWEWTDASLTEGVARFETWRSAVSGNGGPDADATLAE 373

Query: 351 VLSALYNDLNTVSAIQALHKLARES 375
           V +AL +DL+   A+ A+ + A  S
Sbjct: 374 VRAALADDLDAPRALAAVDRWAELS 398


>gi|194755026|ref|XP_001959793.1| GF11862 [Drosophila ananassae]
 gi|190621091|gb|EDV36615.1| GF11862 [Drosophila ananassae]
          Length = 741

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 134/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           QF  D   L  L P    R + ++PQ+I  IQ II +G AY AN+ + FD +        
Sbjct: 214 QFHNDMKSLNILPPDVLTRVSEYVPQIITFIQKIIDNGLAYAANSSVYFDVNGFDKREKH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG     +  E  +         K++  DF LWK S   EP W+SPWG+GR
Sbjct: 274 HYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFALWKASKAGEPWWDSPWGKGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS  A    +    ++H G L 
Sbjct: 334 PGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSEAAFNESEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI E L       +   A  +RLA L+  +++ +D+   T++  T+
Sbjct: 394 IAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLLHSWKDTLDYSENTMEMATQ 446

Query: 330 AEILLSKW 337
            E  L+++
Sbjct: 447 FEKFLNEF 454



 Score = 98.6 bits (244), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 46/84 (54%), Positives = 62/84 (73%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+K++N+L R+  EF  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 19  KLKLFNSLTRQKEEFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILANYFGY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV NITDIDDKII+RARQ H
Sbjct: 79  H-IHYVMNITDIDDKIIKRARQNH 101


>gi|109105041|ref|XP_001096069.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 2 [Macaca
           mulatta]
          Length = 738

 Score =  174 bits (440), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 128/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 212 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 271

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +QK        +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 272 SYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 331

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 332 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 391

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 392 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 442



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 47/66 (71%), Gaps = 1/66 (1%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+
Sbjct: 36  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIK 94

Query: 82  RARQEH 87
           RARQ H
Sbjct: 95  RARQNH 100


>gi|116203083|ref|XP_001227353.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
 gi|88177944|gb|EAQ85412.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
          Length = 794

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 132/239 (55%), Gaps = 20/239 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    + F  D   L  L P    R T ++PQ++  ++ II  G AYEAN  + FD ++
Sbjct: 204 LTQAMEKAFSDDMEALNVLPPDAVTRVTEYVPQIVSFVEQIIAKGFAYEANGSVYFDIAA 263

Query: 159 IPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R        + + E+  G+       KK   DF LWK+S P EP W SPWG
Sbjct: 264 FEQAGNTYARLRPESKNDKALQEEGEGSLSKSLEGKKRSGDFALWKKSKPGEPFWPSPWG 323

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC----ADRIEKT-ANI 264
            GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS       +R E +  N 
Sbjct: 324 AGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHQYERGEHSWVNY 383

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           ++H G L++ G KMSKS  NF TI + L T      ++ A  +R+  LM  + + ++ +
Sbjct: 384 FLHMGHLSIAGSKMSKSLKNFQTIQDALAT------TYTARNMRIVFLMGRWNDGVEIS 436



 Score = 45.8 bits (107), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 5  IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
          I ++N+L+      F   +   +  Y CGPT YD +H+G+AR  +  D++ R+L +++G
Sbjct: 4  ITVHNSLKPGSPVPFVPREEGKVSWYACGPTTYDLSHLGHARNYVSTDIIRRILIHHFG 62


>gi|297267201|ref|XP_002799492.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 662

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 128/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 158 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 217

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +QK        +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 218 SYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 277

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 278 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 337

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 338 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 388



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          +G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+RARQ H
Sbjct: 1  MGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIKRARQNH 46


>gi|194218608|ref|XP_001492545.2| PREDICTED: similar to CysRS protein [Equus caballus]
          Length = 868

 Score =  173 bits (439), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSI 159
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT     S  
Sbjct: 341 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTVKFASSEK 400

Query: 160 PNYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +Q+        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 401 HSYGKLVPEAVGDQRALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 460

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 461 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 520

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 521 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 572



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 147 RLRLYNSLTRNKDVFIPQSGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-K 205

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ +
Sbjct: 206 FDVFYCMNITDIDDKIIKRARQNY 229


>gi|58263374|ref|XP_569097.1| cysteine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108600|ref|XP_776953.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259636|gb|EAL22306.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223747|gb|AAW41790.1| cysteine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 785

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 134/249 (53%), Gaps = 26/249 (10%)

Query: 92  INDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
           I D I++   + S     F  D  RL  L P    R + ++P+++  +Q I+ +G AYE 
Sbjct: 235 IADPIAVCRRLASYWENAFFTDMARLRVLPPDTITRVSEYVPEIVSFVQRIVDNGFAYEG 294

Query: 149 NNEIIFDTSSIPNY--------------GSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
              + FD                      S   +K+ ++  G     +  K+ PADF LW
Sbjct: 295 GGSVWFDVDKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEGEGALTGSQ-GKRRPADFALW 353

Query: 195 K-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           K +S P EP W SPWG GRPGWHIECS M+S  LG   DIH GG+DL+FPHH+NE+AQ+ 
Sbjct: 354 KAKSKPGEPAWPSPWGEGRPGWHIECSVMASAILGSGMDIHSGGVDLMFPHHDNELAQAE 413

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                ++  N ++H G L++EG KMSKS  NFITI+E L+T       + A  +RLA ++
Sbjct: 414 AYHGCKQWVNYFLHTGHLHIEGLKMSKSLKNFITIDEALQT-------YSARQLRLAFML 466

Query: 314 THYREPIDF 322
             +   +DF
Sbjct: 467 QIWNAKLDF 475



 Score = 77.4 bits (189), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/132 (37%), Positives = 73/132 (55%), Gaps = 12/132 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R    F   +   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y+   
Sbjct: 25  LRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQDIVRRILRDYFNYD 84

Query: 65  CVTYVRNITDIDDKIIERARQEH---PSIPINDA-----ISIITSKNTQQFVKDTTRLAC 116
            V +V N+TDIDDKII RAR+ +    +I  N A     IS + +  T+   K    L  
Sbjct: 85  -VNFVMNVTDIDDKIILRARESYLLDQAISTNLALTPELISDVEAAFTKYLAKPLKSLT- 142

Query: 117 LAP-THQPRATN 127
            AP  H P AT+
Sbjct: 143 -APLEHSPNATS 153


>gi|326920114|ref|XP_003206320.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 748

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 132/241 (54%), Gaps = 26/241 (10%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSIP 160
           +F KD   L  L P    R + ++P+++  ++ I+ +G+ Y +N  + FDT     S   
Sbjct: 222 EFHKDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGYVSNGSVYFDTVKFASSEKH 281

Query: 161 NYGSFSRRKIDEQKM-----------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
           +Y       + +QK              R+ EK+   +P DF LWK S P EP W+SPWG
Sbjct: 282 SYAKLVPEAVGDQKALQEGEGDLSISADRLCEKH---SPNDFALWKSSKPGEPSWDSPWG 338

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
           +GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS      +     ++H G
Sbjct: 339 KGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDNWVRYFLHTG 398

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  
Sbjct: 399 HLTIAGCKMSKSLKNFITIKDAL--KKHTARQ-----LRLAFLMHSWKDTLDYSSNTMES 451

Query: 330 A 330
           A
Sbjct: 452 A 452



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    FQ  +   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+R RQ +
Sbjct: 87  FDVFYCMNITDIDDKIIKRTRQNY 110


>gi|109105037|ref|XP_001096302.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 4 [Macaca
           mulatta]
          Length = 831

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 128/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 305 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 364

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +QK        +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 365 SYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 424

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 425 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 484

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 485 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNH 193


>gi|289622623|emb|CBI50892.1| unnamed protein product [Sordaria macrospora]
          Length = 807

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 157/327 (48%), Gaps = 61/327 (18%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    Q F  D   L  L P    R T ++PQ++  ++ II  G AYEA+  + FD  +
Sbjct: 212 LTKTMEQAFADDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGFAYEADGSVYFDIGA 271

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYH---------KKNPADFILWKRSTPMEPGWESPWG 209
               G+   R   E K  T + E+           KK   DF LWK+S P EP W SPWG
Sbjct: 272 FEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWKKSKPGEPYWPSPWG 331

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS------CCADRIEKTAN 263
            GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS      CC     K  +
Sbjct: 332 AGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHDCC-----KGEH 386

Query: 264 IWI----HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
            W+    H G L++ G KMSKS  NF TI + L +      ++ A  +R+  L++ + + 
Sbjct: 387 TWVKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAS------TYTARNMRIVFLLSRWNDG 440

Query: 320 IDFTVQRLTEAE-----------ILLSKWPQTSTSKGIIDPAVL---------------- 352
           ++ +     +A+            + ++  +   S G+ D ++                 
Sbjct: 441 VEISPDMRKQADNWETTLDNFFTNIKARLSEVDASSGLKDLSLSEDVGAKGLLEDFESAK 500

Query: 353 ----SALYNDLNTVSAIQALHKLARES 375
               +AL N  +T +A+Q L KL R +
Sbjct: 501 KDLDAALRNSFDTPTAMQVLLKLVRNA 527



 Score = 68.2 bits (165), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/102 (40%), Positives = 58/102 (56%), Gaps = 14/102 (13%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR- 84
           I  Y CGPTVYD +H+G+AR  +  D++ R+L +Y+  K V +V N TD+DDKII +AR 
Sbjct: 26  ISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYFDYK-VNFVMNYTDVDDKIIIKARR 84

Query: 85  -------QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
                  +E P  P  + I  +  K  Q + K+   L  LAP
Sbjct: 85  KRLLELEKEKPYTP--EQIRDLIFKAFQAYTKN---LPLLAP 121


>gi|114635644|ref|XP_508228.2| PREDICTED: cysteinyl-tRNA synthetase isoform 9 [Pan troglodytes]
 gi|114635646|ref|XP_001156007.1| PREDICTED: cysteinyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 684

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 159 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 218

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 219 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 278

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 279 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 338

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 339 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 388



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 35/47 (74%), Gaps = 1/47 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          +G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+RARQ H
Sbjct: 1  MGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIKRARQNH 46


>gi|109105039|ref|XP_001096538.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 5 [Macaca
           mulatta]
          Length = 748

 Score =  173 bits (439), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 90/238 (37%), Positives = 128/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 222 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 281

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +QK        +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 282 SYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 341

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 342 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 401

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 402 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNH 110


>gi|114635648|ref|XP_001155769.1| PREDICTED: cysteinyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 656

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 131 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 190

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 191 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 250

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 251 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 310

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 311 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 360


>gi|321252445|ref|XP_003192408.1| cysteine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458876|gb|ADV20621.1| Cysteine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 785

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 135/249 (54%), Gaps = 26/249 (10%)

Query: 92  INDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
           I D I++   + S     F  D  RL  L P    R + ++P+++  +Q I+ +G AYE 
Sbjct: 235 IADPIAVCRRLASYWENAFFTDMARLRVLPPDTITRVSEYVPEIVSFVQRIVDNGFAYEG 294

Query: 149 NNEIIFDTSSIPNY--------------GSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
              + FD +                    S   +K+ ++  G     +  K+ PADF LW
Sbjct: 295 GGSVWFDVNKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEGEGALTGSQ-GKRRPADFALW 353

Query: 195 K-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           K +S P EP W SPWG GRPGWHIECS M+S  LG   D+H GG+DL+FPHH+NE+AQ+ 
Sbjct: 354 KAKSKPGEPAWPSPWGEGRPGWHIECSVMASAILGSGMDVHSGGVDLMFPHHDNELAQAE 413

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                ++  N ++H G L++EG KMSKS  NFITI+E L+T       + A  +RLA ++
Sbjct: 414 AYHGCKQWVNYFLHTGHLHIEGLKMSKSLKNFITIDEALQT-------YSARQLRLAFML 466

Query: 314 THYREPIDF 322
             +   +DF
Sbjct: 467 QIWNAKLDF 475



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 8/130 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R    F   +   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y+   
Sbjct: 25  LRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQDIIRRILRDYFNYD 84

Query: 65  CVTYVRNITDIDDKIIERARQEH---PSIPINDAIS-IITSKNTQQFVKDTTRLACLAPT 120
            V +V N+TDIDDKII RAR+ +    +I  N A++  + S     F K   +     PT
Sbjct: 85  -VNFVMNVTDIDDKIILRARESYLLDQAISSNPALTPQLISDVEAAFTKYIAKPLKSLPT 143

Query: 121 ---HQPRATN 127
              H P AT+
Sbjct: 144 PLEHSPNATS 153


>gi|226287115|gb|EEH42628.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 830

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 117/362 (32%), Positives = 176/362 (48%), Gaps = 56/362 (15%)

Query: 67  TYVRNITDI-----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           T+ +N+ D+     D       R E  SI      + +T     +F+KD   L  L P  
Sbjct: 233 TFYKNVQDVLLEHLDSLYGSSIRGEDRSI-----FTKLTKTYEDRFMKDIRDLNVLDPDA 287

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKID 171
             R T ++P+++  ++ I+ H  AY  ++  + FD ++    G S++R         K+ 
Sbjct: 288 VTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQ 347

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G  +     K++PADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  
Sbjct: 348 AEGEGALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQM 407

Query: 232 DIHGGGLDLIFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           DIH GG+DL FPHH+NE+AQS       CA       N ++H G L+++G KMSKS  NF
Sbjct: 408 DIHSGGIDLAFPHHDNELAQSEAYWHENCAQN--HWVNYFLHMGHLSIQGSKMSKSLKNF 465

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
            TI E L+   +  RS     +R+  L+  +++ I+ T   +        K         
Sbjct: 466 TTIREALDKGDWTPRS-----LRIVFLLGGWKDGIEITEDLVKAGNAWEEKANNFFINAR 520

Query: 338 ---PQTSTSKGIIDPAVLSAL-------YNDL----NTVSAIQALHKL-ARESTKNHDLL 382
               Q ++  G  D  + +AL       Y +L    NT  A+ A+ +L ++ +  N   L
Sbjct: 521 DSVAQANSDAGSTDDTLATALKSAQDAVYQNLCDSFNTAGAMHAISELISKYNISNKSTL 580

Query: 383 PI 384
           P+
Sbjct: 581 PV 582



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 3/77 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYFN 85

Query: 63  EKCVTYVRNITDIDDKI 79
              V ++ NITD+DDK+
Sbjct: 86  FD-VQFIMNITDVDDKV 101


>gi|184201038|ref|YP_001855245.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|310947188|sp|B2GIP6|MSHC_KOCRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|183581268|dbj|BAG29739.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Kocuria rhizophila DC2201]
          Length = 438

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 127/406 (31%), Positives = 198/406 (48%), Gaps = 60/406 (14%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++++T   ++    A D     +YVCG T YD  H+G+A   + FD+L+RL R       
Sbjct: 20  RVHDTSTGQLEPLAARD-GRASLYVCGITPYDATHMGHAATYVAFDLLHRLWRD--AGWS 76

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLACLAPTH 121
           V YV+N+TD+DD ++ERA          DA  +    +    T+ F  D + L  LAP H
Sbjct: 77  VDYVQNVTDVDDPLLERA----------DATGVDWRELAESQTELFRTDMSALNVLAPQH 126

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSI-------PN- 161
              AT  + +++  ++ ++  G AY A              ++ FD  +        P+ 
Sbjct: 127 YVGATEVVDRIVPAVERLLERGLAYRAPAGTGQGGEPAPAGDVYFDVDAAGALRAEDPDA 186

Query: 162 --YGSFSRRKIDEQKMGTRV------PEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGR 212
              GS  R   +  +M          P++  K++P D +LW+     EP W+ +  G GR
Sbjct: 187 WVVGSTCRLAGERDRMMPLFADHGGDPDRTGKRDPMDPLLWRAHRAGEPSWDGASLGPGR 246

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS ++   L + F + GGG DL FPHH+   A    A   +  A  ++H   + 
Sbjct: 247 PGWHIECSVIALDLLPRPFTVQGGGSDLAFPHHDMG-AGHAYALSGQPMAEHYVHTAMVG 305

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
           L+G KMSKS GN +    L+ T +  G   PA VIRLA+L  HYR    +T + L +A  
Sbjct: 306 LDGEKMSKSRGNLV----LVSTLRAQGMD-PA-VIRLAILANHYRTDWFWTDELLEQARR 359

Query: 333 LLSKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            L  W       +T+ +  +++ AV +AL  DLN+ +A+ A+   A
Sbjct: 360 RLGTWREAAAKQETAGADAMLE-AVRAALGEDLNSPAALIAVDAWA 404


>gi|119622942|gb|EAX02537.1| cysteinyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|193788362|dbj|BAG53256.1| unnamed protein product [Homo sapiens]
          Length = 738

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 213 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 272

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 273 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 332

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 333 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 392

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 393 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 442



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+
Sbjct: 36  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIK 94

Query: 82  RARQEH 87
           RARQ H
Sbjct: 95  RARQNH 100


>gi|114635640|ref|XP_001155891.1| PREDICTED: cysteinyl-tRNA synthetase isoform 3 [Pan troglodytes]
 gi|332835583|ref|XP_001156119.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 6 [Pan
           troglodytes]
          Length = 738

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 213 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 272

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 273 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 332

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 333 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 392

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 393 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 442



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+
Sbjct: 36  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIK 94

Query: 82  RARQEH 87
           RARQ H
Sbjct: 95  RARQNH 100


>gi|194379958|dbj|BAG58331.1| unnamed protein product [Homo sapiens]
          Length = 662

 Score =  173 bits (438), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 159 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 218

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 219 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 278

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 279 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 338

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 339 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 388



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          +G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+RARQ H
Sbjct: 1  MGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIKRARQNH 46


>gi|332835587|ref|XP_003312913.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 662

 Score =  173 bits (438), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 159 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 218

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 219 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 278

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 279 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 338

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 339 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 388



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          +G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+RARQ H
Sbjct: 1  MGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIKRARQNH 46


>gi|119622944|gb|EAX02539.1| cysteinyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
          Length = 622

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 159 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 218

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 219 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 278

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 279 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 338

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 339 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 388



 Score = 53.1 bits (126), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          +G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+RARQ H
Sbjct: 1  MGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIKRARQNH 46


>gi|30583997|gb|AAP36247.1| Homo sapiens cysteinyl-tRNA synthetase [synthetic construct]
 gi|60652837|gb|AAX29113.1| cysteinyl-tRNA synthetase [synthetic construct]
 gi|60652839|gb|AAX29114.1| cysteinyl-tRNA synthetase [synthetic construct]
          Length = 749

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 223 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 282

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 283 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 342

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 343 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 402

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 403 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|332835581|ref|XP_003312912.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 831

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 306 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 365

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 366 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 425

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 426 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 485

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 486 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 171 D-VFYCMNITDIDDKIIKRARQNH 193


>gi|114635636|ref|XP_001156397.1| PREDICTED: cysteinyl-tRNA synthetase isoform 8 [Pan troglodytes]
 gi|332835579|ref|XP_001155829.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 2 [Pan
           troglodytes]
          Length = 748

 Score =  172 bits (437), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 223 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 282

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 283 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 342

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 343 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 402

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 403 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|10835051|ref|NP_001742.1| cysteinyl-tRNA synthetase, cytoplasmic isoform b [Homo sapiens]
 gi|20141641|sp|P49589|SYCC_HUMAN RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|9837515|gb|AAG00578.1|AF288206_1 cytoplasmic cysteinyl-tRNA synthetase [Homo sapiens]
 gi|12804055|gb|AAH02880.1| Cysteinyl-tRNA synthetase [Homo sapiens]
 gi|32880169|gb|AAP88915.1| cysteinyl-tRNA synthetase [Homo sapiens]
 gi|60655925|gb|AAX32526.1| cysteinyl-tRNA synthetase [synthetic construct]
 gi|119622941|gb|EAX02536.1| cysteinyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119622945|gb|EAX02540.1| cysteinyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|123979740|gb|ABM81699.1| cysteinyl-tRNA synthetase [synthetic construct]
          Length = 748

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 223 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 282

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 283 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 342

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 343 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 402

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 403 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|62240992|ref|NP_001014437.1| cysteinyl-tRNA synthetase, cytoplasmic isoform c [Homo sapiens]
 gi|57997552|emb|CAI46108.1| hypothetical protein [Homo sapiens]
 gi|119622946|gb|EAX02541.1| cysteinyl-tRNA synthetase, isoform CRA_e [Homo sapiens]
 gi|194380236|dbj|BAG63885.1| unnamed protein product [Homo sapiens]
          Length = 831

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 306 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 365

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 366 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 425

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 426 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 485

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 486 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 171 D-VFYCMNITDIDDKIIKRARQNH 193


>gi|322816399|gb|EFZ24717.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 721

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/309 (35%), Positives = 155/309 (50%), Gaps = 52/309 (16%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------- 159
           F +D  RL    P    R T ++PQ++  IQ I+ +G AY   + I FDT++        
Sbjct: 246 FFEDMRRLGIRDPDVVSRVTEYVPQVVDFIQKIMDNGFAYRGTSSIFFDTTAFLRAGHDY 305

Query: 160 PNYGSFSRR--------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
           P     S R        ++ E +    V     K+N  DF LWK S P EP W SPWG G
Sbjct: 306 PKLKPVSERGENDATEAEMAEGEGALTVGVAGEKRNANDFALWKFSKPGEPRWPSPWGAG 365

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   D+H GG DL FPHH+NE AQS       +  N ++H G L
Sbjct: 366 RPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDNECAQSEACHMQHQWINYFLHCGHL 425

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
           +++G KMSKS  NFITI + L+      R     V+RL  L  H+ +P++F+ Q + EA 
Sbjct: 426 HIKGLKMSKSLKNFITIRQALDELDVTPR-----VMRLLFLANHWGKPMNFSDQSIEEAK 480

Query: 331 -------------EILLSK--WPQTSTSKGIID-------------PAVLSALYNDLNTV 362
                        +I+L K  W +T   +G+ D              AV +AL N+ +T 
Sbjct: 481 ERERVLRAFFGSVDIVLRKDNWGET---QGLNDHDRRLQETWLTAENAVHAALQNNFDTP 537

Query: 363 SAIQALHKL 371
           +A+ ++  L
Sbjct: 538 AAMDSVMGL 546



 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 55/82 (67%), Gaps = 1/82 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ N+L   +  F   +   +R Y CGPTVY+ +H+G+AR  + FD+L R++  Y+G
Sbjct: 37  KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMEDYFG 96

Query: 63  EKCVTYVRNITDIDDKIIERAR 84
            + V Y  NITDIDDKII+RAR
Sbjct: 97  YQVV-YQMNITDIDDKIIKRAR 117


>gi|3242657|dbj|BAA29032.1| cysteinyl-tRNA synthetase [Mus musculus]
          Length = 486

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 128/239 (53%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD      L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 176 EEFHKDMEAPNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 235

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 236 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 295

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 296 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 355

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 356 TIAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 407



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 22 DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
          D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +  V Y  NITDIDDKII 
Sbjct: 1  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-QYDVFYCMNITDIDDKIIR 59

Query: 82 RARQEH 87
          RARQ +
Sbjct: 60 RARQNY 65


>gi|21269877|ref|NP_644802.1| cysteinyl-tRNA synthetase, cytoplasmic isoform a [Homo sapiens]
 gi|9837517|gb|AAG00579.1|AF288207_1 cysteinyl-tRNA synthetase [Homo sapiens]
 gi|119622943|gb|EAX02538.1| cysteinyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 726

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 223 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 282

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 283 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 342

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 343 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 402

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 403 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|332024052|gb|EGI64270.1| Cysteinyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 732

 Score =  172 bits (437), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 92/231 (39%), Positives = 128/231 (55%), Gaps = 20/231 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           +F KD   L  L P    R + ++ ++I  IQ II +G+AYE+N  + FD          
Sbjct: 206 EFHKDMDALNILKPNVLTRVSEYVEEIITFIQQIIDNGYAYESNGSVYFDVDKFDKQEKH 265

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG  S  +  E  + T   +   KK+  DF LWK S   EP WESPWGRGR
Sbjct: 266 SYAKLVPEAYGDTSSLEEGEGDLSTTADKLSEKKSVTDFALWKCSKAGEPWWESPWGRGR 325

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQ+            ++H+G L 
Sbjct: 326 PGWHIECSVMASAICGESLDIHTGGVDLKFPHHDNELAQAEACFNNSHWVRYFLHSGHLT 385

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           + G KMSKS  NF+TI + L  KK+  R      +RLA L+  +++ +D++
Sbjct: 386 IAGCKMSKSLKNFVTIQDAL--KKYSSRQ-----LRLAFLLHSWKDTLDYS 429



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 7/83 (8%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          +++YN+L R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L      Y+G  
Sbjct: 20 LRLYNSLTREKEIFVPQFGNRVLWYSCGPTVYDASHMGHARSYISFDIL------YFGYD 73

Query: 65 CVTYVRNITDIDDKIIERARQEH 87
           + YV NITDIDDKII+RARQ +
Sbjct: 74 -ILYVMNITDIDDKIIKRARQNY 95


>gi|303304987|ref|NP_001181926.1| cysteinyl-tRNA synthetase, cytoplasmic isoform e [Homo sapiens]
          Length = 809

 Score =  172 bits (437), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 306 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 365

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 366 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 425

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 426 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 485

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 486 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 171 D-VFYCMNITDIDDKIIKRARQNH 193


>gi|194391202|dbj|BAG60719.1| unnamed protein product [Homo sapiens]
          Length = 809

 Score =  172 bits (436), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 306 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 365

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 366 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 425

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 426 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 485

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 486 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 171 D-VFYCMNITDIDDKIIKRARQNH 193


>gi|60302812|ref|NP_001012601.1| cysteinyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|82231219|sp|Q5F408|SYCC_CHICK RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|60098591|emb|CAH65126.1| hypothetical protein RCJMB04_3o5 [Gallus gallus]
          Length = 748

 Score =  172 bits (436), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 91/241 (37%), Positives = 131/241 (54%), Gaps = 26/241 (10%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSIP 160
           +F KD   L  L P    R + ++P+++  ++ I+ +G+ Y +N  + FDT     S   
Sbjct: 222 EFHKDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGYVSNGSVYFDTVKFGSSEKH 281

Query: 161 NYGSFSRRKIDEQKM-----------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
           +Y       + +QK              R+ EK+   +P DF LWK S P EP W+SPWG
Sbjct: 282 SYAKLVPEAVGDQKALQEGEGDLSISADRLCEKH---SPNDFALWKSSKPGEPSWDSPWG 338

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
           +GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS      +     ++H G
Sbjct: 339 KGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDNWVRYFLHTG 398

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L + G KMSKS  NFITI + L+          A  +RLA LM  +++ +D++   +  
Sbjct: 399 HLTIAGCKMSKSLKNFITIKDALQKHT-------ARQLRLAFLMHSWKDTLDYSSNTMES 451

Query: 330 A 330
           A
Sbjct: 452 A 452



 Score = 83.6 bits (205), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    FQ  +   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+R RQ +
Sbjct: 87  FDVFYCMNITDIDDKIIKRTRQNY 110


>gi|927229|gb|AAA73901.1| cysteinyl-tRNA synthetase [Homo sapiens]
          Length = 595

 Score =  172 bits (436), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 180 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 239

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 240 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 299

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 300 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 359

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 360 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 409



 Score = 77.8 bits (190), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 22 DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
          D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+
Sbjct: 3  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIK 61

Query: 82 RARQEH 87
          RARQ H
Sbjct: 62 RARQNH 67


>gi|224050868|ref|XP_002197995.1| PREDICTED: cysteinyl-tRNA synthetase [Taeniopygia guttata]
          Length = 831

 Score =  172 bits (436), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 131/241 (54%), Gaps = 26/241 (10%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSIP 160
           +F KD   L  L P    R + ++P+++  ++ I+ +G+ Y +N  + FDT     S   
Sbjct: 305 EFHKDMEALNVLPPDVLTRVSEYVPEIVDFVKKIVDNGYGYVSNGSVYFDTMKFDASEKH 364

Query: 161 NYGSFSRRKIDEQKM-----------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
           +Y       + +QK              R+ EK+   +P DF LWK S P EP W+SPWG
Sbjct: 365 SYAKLVPEAVGDQKALQEGEGDLSISADRLSEKH---SPNDFALWKSSKPGEPSWDSPWG 421

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
           +GRPGWHIECSAM    LG+  DIHGGG DL FPHH+NE+AQS      +     ++H G
Sbjct: 422 KGRPGWHIECSAMGGSVLGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTG 481

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  
Sbjct: 482 HLTIAGCKMSKSLKNFITIKDAL--KKHTARQ-----LRLAFLMHSWKDTLDYSNNTMES 534

Query: 330 A 330
           A
Sbjct: 535 A 535



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 57/84 (67%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    FQ  +   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLCLYNSLTRSKEVFQPQNGKKVLWYCCGPTVYDASHMGHARSYISFDILRRILRDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 170 YDVFYCMNITDIDDKIIKRARQNH 193


>gi|164425498|ref|XP_960203.2| hypothetical protein NCU05642 [Neurospora crassa OR74A]
 gi|157070948|gb|EAA30967.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 806

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 157/327 (48%), Gaps = 61/327 (18%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    + F  D   L  L P    R T ++PQ++  ++ II  G AYEA+  + FD  +
Sbjct: 212 LTKTMEKAFADDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGFAYEADGSVYFDIGA 271

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYH---------KKNPADFILWKRSTPMEPGWESPWG 209
               G+   R   E K  T + E+           KK   DF LWK+S P EP W SPWG
Sbjct: 272 FEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWKKSKPGEPYWPSPWG 331

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS------CCADRIEKTAN 263
            GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS      CC     K  +
Sbjct: 332 AGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHDCC-----KGEH 386

Query: 264 IWI----HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
            W+    H G L++ G KMSKS  NF TI + L +      ++ A  +R+  L++ + + 
Sbjct: 387 TWVKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAS------TYTARNMRIVFLLSRWNDG 440

Query: 320 IDFTVQRLTEAE-----------ILLSKWPQTSTSKGIIDPAVL---------------- 352
           ++ +     +A+            + ++  +   S GI D ++                 
Sbjct: 441 VEISPDMRKQADNWETTLDNFFTNIKARLSEVDASSGIKDLSLSEDAGARGLLEDFEQAK 500

Query: 353 ----SALYNDLNTVSAIQALHKLARES 375
               +AL N  +T +A+Q L KL R +
Sbjct: 501 KDLDAALRNSFDTPTAMQVLLKLVRNA 527



 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 30/61 (49%), Positives = 44/61 (72%), Gaps = 1/61 (1%)

Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
          I  Y CGPTVYD +H+G+AR  +  D++ R+L +Y+  K V +V N TD+DDKII +AR+
Sbjct: 26 ISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYFDYK-VNFVMNYTDVDDKIIIKARR 84

Query: 86 E 86
          +
Sbjct: 85 K 85


>gi|114635650|ref|XP_001156338.1| PREDICTED: cysteinyl-tRNA synthetase isoform 7 [Pan troglodytes]
          Length = 683

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 223 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 282

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 283 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 342

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 343 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 402

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 403 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|332835585|ref|XP_001155951.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 4 [Pan
           troglodytes]
          Length = 739

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 236 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 295

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 296 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 355

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 356 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 415

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 416 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 465



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 41  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 100

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 101 D-VFYCMNITDIDDKIIKRARQNH 123


>gi|194383970|dbj|BAG59343.1| unnamed protein product [Homo sapiens]
          Length = 739

 Score =  172 bits (436), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 236 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 295

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 296 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 355

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 356 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 415

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 416 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 465



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 41  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 100

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 101 D-VFYCMNITDIDDKIIKRARQNH 123


>gi|154333641|ref|XP_001563077.1| cysteinyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060087|emb|CAM37400.1| putative cysteinyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 780

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 163/330 (49%), Gaps = 47/330 (14%)

Query: 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-- 159
           K  + F +D  RL    P    R T ++PQ++  +Q II +G AY     + FDT +   
Sbjct: 238 KYERAFFEDMQRLGIRDPDIVSRVTEYVPQVVEFVQKIIDNGFAYVGETSVFFDTEAYIR 297

Query: 160 -----PNYGSFSRRKIDEQKMG------TRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
                P       R   E++M       T+  E   K++  DF LWK S P EP W SPW
Sbjct: 298 AGHDYPKLKPGGDRNTTEEEMAEGEGTLTKAVEG-EKRSSNDFALWKFSKPGEPRWPSPW 356

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECS M+S  LG+  DIH GG DL FPHH+NE AQS   +   +  N ++H 
Sbjct: 357 GAGRPGWHIECSVMASDVLGENMDIHSGGWDLKFPHHDNECAQSEACNLHNQWVNYFLHC 416

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L+++G KMSKS  NFITI + L+      R+     +RL  L + + +P++F+ Q L 
Sbjct: 417 GHLHIKGLKMSKSLKNFITIRQALDDLGVTPRT-----MRLLFLASPWYKPMNFSDQSLD 471

Query: 329 EA--------------EILL--SKWPQTST---------SKGI-IDPAVLSALYNDLNTV 362
           EA              +I+L    W  T            K I  + AV +AL ++ +TV
Sbjct: 472 EAKEKERVLRAFFGSVDIVLRADNWKATQGVNTYDRELLGKCIEAEAAVHAALQDNFDTV 531

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHIL 392
            A+Q L  L   +  N  LL     SA ++
Sbjct: 532 VALQQLMSLV--AATNQYLLSGERPSATLV 559



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G  
Sbjct: 38  LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMEDYFG-Y 96

Query: 65  CVTYVRNITDIDDKIIERAR 84
            V Y  NITDIDDKII+RAR
Sbjct: 97  SVLYQMNITDIDDKIIKRAR 116


>gi|328952801|ref|YP_004370135.1| cysteine synthase [Desulfobacca acetoxidans DSM 11109]
 gi|328453125|gb|AEB08954.1| cysteine synthase [Desulfobacca acetoxidans DSM 11109]
          Length = 770

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 137/470 (29%), Positives = 213/470 (45%), Gaps = 50/470 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            +NT  R    F         +Y  GPT+  +  + +AR ++V D+L R L Y   +  V
Sbjct: 309 FFNTEGRSKQAFLPQHLGQASIYTDGPTMDGYLTLTDARRLMVADLLRRYLEYRGYQ--V 366

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V N+TD+DD+ I  A      +P+N      T +   +F  D   L        P+AT
Sbjct: 367 KQVVNLTDLDDRTIRGAVA--AGLPLN----AFTQQYIDEFFADIDALRLKRAEVYPKAT 420

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHK 185
           +HI  M+ L++ ++  G+AYE    + FD S    YG  S   +++ ++G  V  + Y K
Sbjct: 421 DHIDDMVALVKRLLEKGYAYEKLRSVYFDISRFRGYGKLSHVNLEKIRLGKTVDLDDYEK 480

Query: 186 KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            NP DF L KR+   E      + + WG  RPGWH+EC+AM+  +LG+ FDI  GG +LI
Sbjct: 481 DNPCDFTLLKRAKLGELKLGLYYPTEWGNVRPGWHLECAAMALKHLGESFDIVTGGSNLI 540

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHEN IA  C A   +  A  W+HN  +        +S G   T+  L +T  +G   
Sbjct: 541 FPHHENVIA-ICEAVSGKPLARYWLHNESVLGVMAAAEESEGP-TTVRRLFQTGVWG--- 595

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSK---------G 345
                +R  +L THYR+ +  + + L  A       ++ L +  + +  K          
Sbjct: 596 ---VDLRFLLLATHYRKTLHLSNEALDAARRSRRRLDLFLERLNRVNGGKPEGDLPERLA 652

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARE-----------STKNHDLLPIFNASAHILGI 394
            ++    +AL +DLN   A+ AL    RE             +   ++  F     +LG 
Sbjct: 653 RLESEFTAALDDDLNIAGALAALFNFQREINIWMDRGRLAEAEAEAIIDQFRQFDRVLG- 711

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            V           AIE+ ++ER      + F+ AD IR++L   G  + D
Sbjct: 712 -VMNFPTPAPTDAAIEEKLREREEARGRQDFARADEIRQELAVLGIEVLD 760


>gi|297687912|ref|XP_002821443.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 6
           [Pongo abelii]
          Length = 662

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 158 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 217

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +Q         +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 218 SYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 277

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 278 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 337

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 338 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 388



 Score = 53.1 bits (126), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/47 (57%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          +G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+RARQ H
Sbjct: 1  MGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIKRARQNH 46


>gi|147899657|ref|NP_001080786.1| cysteinyl-tRNA synthetase, cytoplasmic [Xenopus laevis]
 gi|82241490|sp|Q7ZWR2|SYCC_XENLA RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28436794|gb|AAH46746.1| Cars-prov protein [Xenopus laevis]
          Length = 747

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 128/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           ++ KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + F T+   +    
Sbjct: 221 EYHKDMEALNVLTPDVLTRVSEYVPEIVAFVQKIVDNGYGYVSNGSVYFSTAKFHDSENH 280

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            Y       + +QK        +         K++P DF LWK S P EP WESPWG+GR
Sbjct: 281 FYAKLVPEAVGDQKALQEGEGDLSISADRLSEKQSPNDFALWKASKPGEPSWESPWGKGR 340

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 341 PGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHTGHLT 400

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L+          A  +RLA LM  +++ +D++   +  A
Sbjct: 401 IAGCKMSKSLKNFITIKDALQKNT-------ARQLRLAFLMHSWKDTLDYSNNTMESA 451



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ + 
Sbjct: 28  LRLYNSLTRSKELFFPQVGRKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-KY 86

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V Y  NITDIDDKII+RARQ H
Sbjct: 87  DVFYCMNITDIDDKIIKRARQRH 109


>gi|258652760|ref|YP_003201916.1| cysteine--tRNA ligase [Nakamurella multipartita DSM 44233]
 gi|258555985|gb|ACV78927.1| Cysteine--tRNA ligase [Nakamurella multipartita DSM 44233]
          Length = 392

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 149/292 (51%), Gaps = 20/292 (6%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           S  RMYVCG T YD  H+G+A   +  D    +LR   G   V+  RN+TD+DD ++  A
Sbjct: 41  SPARMYVCGITPYDVTHLGHAATFVWADAAQAVLRSI-GVHTVS-CRNVTDVDD-VLTAA 97

Query: 84  RQEHPSIPINDAISIITSKNTQQFV--KDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
              H       A+        Q+F+  +D   L    PTH PRA + +PQ+  L   ++ 
Sbjct: 98  ADAHGRHYDEHAV-------YQEFLFEQDMAALRVARPTHTPRARHFVPQVRQLAAALLA 150

Query: 142 HGHAYEANNEIIF-DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
            GHAY+ +  + F    ++   G      ++        PE   +++P D  +W+ ST  
Sbjct: 151 TGHAYQRDGSVYFRGRGAVAAAGLSGDLAVELSAEFGDAPEDPAREDPFDVPVWRPSTDR 210

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           +P W SPWG GRPGWH EC+AMS   LG   D+  GG DL+FPHH  + A    A  +  
Sbjct: 211 DPAWPSPWGWGRPGWHAECAAMSMATLGAGVDVLIGGQDLVFPHHAYQAALVQAASGVAP 270

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            A   +H G ++ +GRKM+KS GN + I++LL       RS P   +R+ +L
Sbjct: 271 FARRAMHVGAVHYQGRKMAKSTGNLVLISDLL-------RSCPPAAVRMLLL 315


>gi|297687908|ref|XP_002821441.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 4
           [Pongo abelii]
          Length = 738

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 212 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 271

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +Q         +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 272 SYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 331

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 332 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 391

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 392 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 442



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+
Sbjct: 36  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIK 94

Query: 82  RARQEH 87
           RARQ H
Sbjct: 95  RARQNH 100


>gi|75075917|sp|Q4R550|SYCC_MACFA RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|67970866|dbj|BAE01775.1| unnamed protein product [Macaca fascicularis]
          Length = 748

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 128/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y ++  + FDT+   +    
Sbjct: 222 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSDGSVYFDTAKFASSEKH 281

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +QK        +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 282 SYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 341

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 342 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 401

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 402 ITGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNH 110


>gi|167526279|ref|XP_001747473.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773919|gb|EDQ87553.1| predicted protein [Monosiga brevicollis MX1]
          Length = 531

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 160/333 (48%), Gaps = 50/333 (15%)

Query: 85  QEHPSIPINDAI-SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           ++H S   + AI + +T     ++  D   L    PT   R T ++ +++  I+ II +G
Sbjct: 107 KQHGSTVEDHAIFARLTQHWEAEYFADMAALNVRPPTVLTRVTEYVEEIVTFIEQIISNG 166

Query: 144 HAYEANNEIIFDTSSIPNYGSFSR----RKIDEQKM---------GTRVPEKYHKKNPAD 190
           +AY +N  + FD+   P Y +       + + E            G+       K++P D
Sbjct: 167 YAYASNGSVYFDS---PRYAASDAHDYPKLVPEASQDVASLADAEGSLSSSDNEKRSPYD 223

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S P EP W+SPWG+GRPGWHIECSAM     G   DIH GG+DL FPHH+NEIA
Sbjct: 224 FALWKASKPGEPAWDSPWGKGRPGWHIECSAMCHAAFGDKIDIHSGGIDLCFPHHDNEIA 283

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS       +  N + H+G L +EG KMSKS  NFITI + L+          A  IRL 
Sbjct: 284 QSEAFYDQGQWCNYFCHSGHLTIEGLKMSKSLKNFITIKDALKKHN-------ATQIRLT 336

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------------TSTSKGIIDPA 350
            L   +   +D++   + EA +L  ++ +                    T   KG++   
Sbjct: 337 FLTHGWNSTLDYSEAGMVEATVLEKQFKEFFYTVNALVRRDEGQPFRDMTENDKGLLQTF 396

Query: 351 VL------SALYNDLNTVSAIQALHKLARESTK 377
            +       AL ++ +T +AI A+  L  E+ K
Sbjct: 397 GVHRQRLHEALCDNFDTATAIAAMRSLMTEANK 429


>gi|167540088|ref|XP_001733555.1| cysteinyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165893955|gb|EDR22070.1| cysteinyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 405

 Score =  171 bits (434), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/247 (38%), Positives = 135/247 (54%), Gaps = 4/247 (1%)

Query: 50  FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE-RARQEHPSIPINDAISIITSKNTQQFV 108
           ++ ++  L  + G+        +TD+  K ++ R ++    I + +A      K  + F 
Sbjct: 102 YEKVFPTLDSFNGQNTTEVFARMTDVIGKYLDIRQKESVDPIEMKEAARAHARKYEELFF 161

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
            D   L    P    R T  IP++I  IQ II +G+AYE+N  + FDT+S    G  +  
Sbjct: 162 ADCDALGIRRPDVISRVTEFIPEVIAFIQKIIDNGYAYESNGSVYFDTASFRKAG-MTYG 220

Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           +++   +G    P    K N  DF LWK+S   EP WES WG GRPGWHIECSAM+S+  
Sbjct: 221 RLEPWSVGDVDAPADGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVF 280

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENE+AQS    ++ E     ++H G L++ G KMSKS  NFI
Sbjct: 281 GDTLDIHSGGEDLKFPHHENELAQSEAYFNKKESWVRYFLHTGHLHINGLKMSKSLKNFI 340

Query: 287 TINELLE 293
             N+LL+
Sbjct: 341 PSNKLLK 347



 Score = 44.3 bits (103), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%)

Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
          +H+G+AR  +  D+  R+L  Y+G + +  + NITD+DDKII +AR+
Sbjct: 1  SHLGHARTYLSTDIFRRILEDYFGYQVIQCM-NITDVDDKIILKARK 46


>gi|297687904|ref|XP_002821439.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Pongo abelii]
 gi|297687906|ref|XP_002821440.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 3
           [Pongo abelii]
          Length = 748

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 222 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 281

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +Q         +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 282 SYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 341

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 342 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 401

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 402 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|62896787|dbj|BAD96334.1| cysteine-tRNA ligase isoform a variant [Homo sapiens]
          Length = 726

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 127/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 223 FHRDMEALNVLPPDVLTRVSEYVPEIVNSVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 282

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 283 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 342

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 343 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 402

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 403 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 452



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFMPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|297687902|ref|XP_002821438.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Pongo abelii]
          Length = 831

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 305 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 364

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +Q         +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 365 SYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 424

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 425 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 484

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 485 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 535



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 170

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 171 D-VFYCMNITDIDDKIIKRARQNH 193


>gi|158521179|ref|YP_001529049.1| cysteine synthase [Desulfococcus oleovorans Hxd3]
 gi|158510005|gb|ABW66972.1| cysteine synthase [Desulfococcus oleovorans Hxd3]
          Length = 771

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/331 (32%), Positives = 165/331 (49%), Gaps = 21/331 (6%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + ++NTL R+   F  +      +Y CGPTV+    +G  R M+  D+L R L Y  
Sbjct: 300 KSGVVLFNTLTREKEAFAPLAQGKASIYSCGPTVHARMDLGQCRRMVFADLLCRYLVYRG 359

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V ++ NITD DD+ IE A++    +      +  T      F  D   L       
Sbjct: 360 FE--VRHIVNITDFDDRTIEGAQKAGMDL------AAFTGTYIDLFKADLKTLRVHPADA 411

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            P A+   P+M+ L++ ++  G AYE    + FD +S   YG  S    ++ ++G  V  
Sbjct: 412 YPLASQEAPEMVALVEKLVDRGVAYEKLRSVYFDIASAEGYGGLSNIDTNKIRLGATVDL 471

Query: 181 EKYHKKNPADFILWKRS--TPMEPGW--ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++Y K+NP DF L KR+  + ++ GW  ++ WG  RP  HI+C+A+S  YLG  FDIH G
Sbjct: 472 DEYEKENPRDFTLLKRAKMSELKQGWYLKTRWGNVRPSLHIQCAAISRKYLGDRFDIHTG 531

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
             DL+FPHHENEIA +  A   E  A  W+H   + LE            T+ + L+   
Sbjct: 532 SRDLVFPHHENEIAIARAATGRE-PARYWVHCDSV-LESDDSVHWKTARTTLEQALDM-G 588

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           F GR      +R  ++  HYR+ + F+  R+
Sbjct: 589 FTGRQ-----LRYWLISGHYRKALSFSADRI 614


>gi|134099214|ref|YP_001104875.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007173|ref|ZP_06565146.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133911837|emb|CAM01950.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 375

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 149/306 (48%), Gaps = 18/306 (5%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+Y CG T YD  H+G+A   +  DVL R+LR    E  V   RN+TD+DD +++ A + 
Sbjct: 19  RVYACGVTPYDVTHLGHAATFVWVDVLARVLRLLDVEPEVC--RNVTDVDD-VLDAASER 75

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
             +    D  + I   +  QF  D   L    P H+PRA  ++  +I L   ++  G AY
Sbjct: 76  AGAY--YDRFAAI---HQFQFDDDMAALNVRPPEHEPRAHRYVESVIRLACGLLGRGAAY 130

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
            +   + F    +P      R +     ++ G R P+   K++  D  +W+ S P  P W
Sbjct: 131 SSGGSVYFRGHDVPARAGVERLEALRLARQFGGR-PDDPAKEDEFDVAVWQASEPGHPSW 189

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           +SPWG GRPGWH EC AMS   LG   DIH GG DL FPHH    A +     I   A  
Sbjct: 190 DSPWGPGRPGWHAECVAMSLSVLGAGVDIHAGGADLRFPHHAYHAAMAEAFTGITPYARS 249

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W H G + + G KM+KS GN + + +LL           +  IRL +L   ++   D+  
Sbjct: 250 WFHVGTVAVAGEKMAKSAGNLVLLGDLLAEHS-------SDTIRLMILDRPWQSSWDYLP 302

Query: 325 QRLTEA 330
           Q+   A
Sbjct: 303 QQADAA 308


>gi|158259887|dbj|BAF82121.1| unnamed protein product [Homo sapiens]
          Length = 647

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 90/237 (37%), Positives = 126/237 (53%), Gaps = 20/237 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +     
Sbjct: 223 FHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKHS 282

Query: 162 YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           YG      + +QK        +         K++P DF LWK S P EP W  PWG+GRP
Sbjct: 283 YGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGRP 342

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L +
Sbjct: 343 GWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLTI 402

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L  KK   R      +RLA LM  ++  +D++   +  A
Sbjct: 403 AGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKGTLDYSSNTMESA 452



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 88  D-VFYCMNITDIDDKIIKRARQNH 110


>gi|242001294|ref|XP_002435290.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215498620|gb|EEC08114.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 819

 Score =  171 bits (433), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 91/247 (36%), Positives = 134/247 (54%), Gaps = 22/247 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-NYG 163
           ++F KD T L  L P    R + ++P+++  +  I+  G  YE+   + FDT+    + G
Sbjct: 214 EEFYKDMTALNVLPPDVVTRVSEYVPEIVDYVAKIVEAGFGYESKGSVYFDTARFDGDPG 273

Query: 164 SF----------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
            F           R+ + E +    V     K+N  DF LWK S P EP W+SPWG GRP
Sbjct: 274 HFYAKLVPEAFGDRKALREGEGDLSVAGDDEKRNANDFALWKASKPGEPAWDSPWGAGRP 333

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S+ LG   DIH GG DL FPHH+NEIAQ+      +     ++H+G L +
Sbjct: 334 GWHIECSVMASNLLGSSLDIHTGGYDLKFPHHDNEIAQAEAYFGNDHWVRYFLHSGHLTI 393

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
            G KMSKS  NF++I + L       RS  A  +RLA L+  +++ +D++   +  A   
Sbjct: 394 AGCKMSKSLKNFVSIRDAL-------RSHSARRLRLAFLLHSWKDTLDYSDNTMESA--- 443

Query: 334 LSKWPQT 340
            ++W +T
Sbjct: 444 -AQWEKT 449



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R+   F       +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 24  RLRLYNSLSREKEVFVPQTGKRVLWYNCGPTVYDASHMGHARSYISFDILRRVLADYFGY 83

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             + YV NITDIDDKII RARQ +
Sbjct: 84  D-IFYVMNITDIDDKIIRRARQNY 106


>gi|119479397|ref|XP_001259727.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119407881|gb|EAW17830.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 808

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 163/313 (52%), Gaps = 29/313 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTS 157
           +T K  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  ++  + FD +
Sbjct: 247 LTKKYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENKFGYVTDDGSVYFDIT 306

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +  N G         S S  K+  +  G    +   K++ +DF LWK S P EP W S W
Sbjct: 307 AFENAGHPYARLEPWSRSDNKLLAEGEGALTKKTTEKRSASDFALWKASKPGEPSWTSSW 366

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-----DRIEKTAN 263
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS           ++  N
Sbjct: 367 GRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSEAYWTHGHSHTDQWVN 426

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +R+ ++ T
Sbjct: 427 YFLHMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWRDGVEIT 481

Query: 324 VQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
            + ++      + W     +  I   DPA LS   +  +T   + A  + A+++T +H L
Sbjct: 482 EELVSAG----NSWEDKVNNFFIKMKDPATLSGQTSGSDTT--LPAALEAAKKATFDH-L 534

Query: 382 LPIFNASAHILGI 394
              FN    +  I
Sbjct: 535 CDSFNTQGAMSAI 547



 Score = 84.3 bits (207), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R    F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 26  LKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
              V ++ NITD+DDKII RARQ+H
Sbjct: 85  HFDVKFIMNITDVDDKIILRARQQH 109


>gi|332267015|ref|XP_003282484.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic, partial
           [Nomascus leucogenys]
          Length = 656

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 128/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y ++  + FDT+   +    
Sbjct: 212 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSSGSVYFDTAKFASSEKH 271

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +QK        +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 272 SYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 331

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 332 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 391

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 392 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 442



 Score = 77.8 bits (190), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+
Sbjct: 36  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIK 94

Query: 82  RARQEH 87
           RARQ H
Sbjct: 95  RARQNH 100


>gi|159126589|gb|EDP51705.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 808

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 163/313 (52%), Gaps = 29/313 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTS 157
           +T K  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  ++  + FD +
Sbjct: 247 LTKKYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENKFGYVTDDGSVYFDIT 306

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +  N G         S S  K+  +  G    +   K++ +DF LWK S P EP W S W
Sbjct: 307 AFENAGHPYARLEPWSRSDNKLVAEGEGALTKKTTEKRSASDFALWKASKPGEPSWTSSW 366

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-----DRIEKTAN 263
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS           ++  N
Sbjct: 367 GRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSEAYWSHGHPHTDQWVN 426

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +R+ ++ T
Sbjct: 427 YFLHMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWRDGVEIT 481

Query: 324 VQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
            + ++      + W     +  I   DPA LS   +  +T   + A  + A+++T +H L
Sbjct: 482 EELVSAG----NSWEDKVNNFFIKMKDPATLSGQTSGSDTT--LPAALEAAKKATFDH-L 534

Query: 382 LPIFNASAHILGI 394
              FN    +  I
Sbjct: 535 CDSFNTQGAMSAI 547



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R    F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 26  LKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
              V ++ NITD+DDKII RARQ+H
Sbjct: 85  HFDVKFIMNITDVDDKIILRARQQH 109


>gi|297687910|ref|XP_002821442.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 5
           [Pongo abelii]
          Length = 739

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+   +    
Sbjct: 235 EFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYVSNGSVYFDTAKFASSEKH 294

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            YG      + +Q         +         K++P DF LWK S P EP W  PWG+GR
Sbjct: 295 SYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKGR 354

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 355 PGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHLT 414

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   +  A
Sbjct: 415 IAGCKMSKSLKNFITIKDAL--KKHSARQ-----LRLAFLMHSWKDTLDYSSNTMESA 465



 Score = 85.5 bits (210), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 41  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKF 100

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 101 D-VFYCMNITDIDDKIIKRARQNH 123


>gi|70997892|ref|XP_753678.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66851314|gb|EAL91640.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 808

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 163/313 (52%), Gaps = 29/313 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTS 157
           +T K  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  ++  + FD +
Sbjct: 247 LTKKYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENKFGYVTDDGSVYFDIT 306

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +  N G         S S  K+  +  G    +   K++ +DF LWK S P EP W S W
Sbjct: 307 AFENAGHPYARLEPWSRSDNKLVAEGEGALTKKTTEKRSASDFALWKASKPGEPSWTSSW 366

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-----DRIEKTAN 263
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS           ++  N
Sbjct: 367 GRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSEAYWSHGHPHTDQWVN 426

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +R+ ++ T
Sbjct: 427 YFLHMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWRDGVEIT 481

Query: 324 VQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
            + ++      + W     +  I   DPA LS   +  +T   + A  + A+++T +H L
Sbjct: 482 EELVSAG----NSWEDKVNNFFIKMKDPATLSGQTSGSDTT--LPAALEAAKKATFDH-L 534

Query: 382 LPIFNASAHILGI 394
              FN    +  I
Sbjct: 535 CDSFNTQGAMSAI 547



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R    F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 26  LKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
              V ++ NITD+DDKII RARQ+H
Sbjct: 85  HFDVKFIMNITDVDDKIILRARQQH 109


>gi|327259955|ref|XP_003214801.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 826

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 93/242 (38%), Positives = 131/242 (54%), Gaps = 26/242 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-----SSI 159
           +++  D   L  L P    R + +IP+++  +Q I+ +G+ Y +N  + FDT     S  
Sbjct: 299 EEYHNDMAALNVLPPDVLTRVSEYIPEIVDFVQKIVDNGYGYVSNGSVYFDTVKFDASEK 358

Query: 160 PNYGSFSRRKIDEQKM-----------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
            +Y       + +QK              R+ EK+   +P DF LWK S   EP WESPW
Sbjct: 359 HSYAKLVPEAVGDQKALQEGEGDLSVSADRLSEKH---SPNDFALWKSSKLGEPSWESPW 415

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G+GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS      +     ++H 
Sbjct: 416 GKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHT 475

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L + G KMSKS  NFITI + L  KK   R      +RLA LM  +++ +D++   + 
Sbjct: 476 GHLTIAGCKMSKSLKNFITIKDAL--KKHTARQ-----LRLAFLMHSWKDTLDYSCNTME 528

Query: 329 EA 330
            A
Sbjct: 529 SA 530



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ +YN+L R   +FQ  + + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 106 KLCLYNSLTRNKDKFQPQNGNKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 164

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ H
Sbjct: 165 YDVFYCMNITDIDDKIIKRARQNH 188


>gi|50304753|ref|XP_452332.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641465|emb|CAH01183.1| KLLA0C03025p [Kluyveromyces lactis]
          Length = 766

 Score =  171 bits (432), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/247 (38%), Positives = 139/247 (56%), Gaps = 22/247 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII------FDTSS 158
           Q++ +D   L  L PT   R + ++P+++  ++ II +G+AY  ++  +      FD+S 
Sbjct: 241 QRYDQDMAALNVLPPTVTTRVSEYVPEIVQFVETIISNGYAYATSDGSVYFDTAKFDSSE 300

Query: 159 IPNYGS---FSRRKIDEQKMG----TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
              Y     +++ ++D  + G    +    K  K++  DF LWK S P EP W SPWG+G
Sbjct: 301 GHEYAKCQPWNKGQLDLIQDGEGSLSDFSAKNGKRSANDFALWKASKPGEPEWPSPWGKG 360

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGF 270
           RPGWHIECS M+S   G V DIH GG+DL FPHH+NE+AQS  C D   +  N ++H G 
Sbjct: 361 RPGWHIECSVMASDIHGSVIDIHTGGIDLAFPHHDNELAQSEACYDN-HQWINYFLHTGH 419

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           L++EG+KMSKS  NFITI E L   K+  R      +RLA     +   +DF    L E 
Sbjct: 420 LHIEGQKMSKSLKNFITIEEAL--NKYSARQ-----LRLAFASVQWNNQLDFKDSLLNEV 472

Query: 331 EILLSKW 337
           + L S +
Sbjct: 473 KSLESSF 479



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/82 (48%), Positives = 55/82 (67%), Gaps = 2/82 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YNTL R   EF     S  +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G 
Sbjct: 41  LKLYNTLTRNKEEFVTHSNSKCVTWYSCGPTVYDASHMGHARNYVSIDINRRILQDYFGY 100

Query: 64  KCVTYVRNITDIDDKIIERARQ 85
             + +V+N+TDIDDKII RARQ
Sbjct: 101 D-INFVQNVTDIDDKIIIRARQ 121


>gi|308198189|ref|XP_001387132.2| cysteinyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149389073|gb|EAZ63109.2| cysteinyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 776

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 138/249 (55%), Gaps = 18/249 (7%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI---PN 161
           +F +D  RL  L  T   R + +IP +I  I  II +G  Y   +  + FDT+     PN
Sbjct: 248 KFDQDMARLNVLPSTVTTRVSEYIPDIIEFIDKIIENGFGYPTKDGSVYFDTAKFENDPN 307

Query: 162 YGSFSRRKIDEQKM-------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
           +     +  ++  M       G+    +  KK+ ADF LWK S P EP W S WG GRPG
Sbjct: 308 HDYAKLQPWNKGDMSLINDGEGSLTTGQDTKKSSADFALWKASKPGEPSWPSKWGEGRPG 367

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++H+G L+++
Sbjct: 368 WHIECSVMASDITGQTMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHSGHLHIQ 427

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G+KMSKS  NFITI + LE   F  R      +RL   ++ + +P+DF    ++E + + 
Sbjct: 428 GQKMSKSLKNFITIEQALE--DFSSRQ-----LRLVFALSSWEKPLDFKDSLISEVKTIE 480

Query: 335 SKWPQTSTS 343
           S + +  T+
Sbjct: 481 SAFSKFFTN 489



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R  TEF  I P +I  Y CGPTVYD +H+G+AR  +  D+  R+ + Y+G  
Sbjct: 38  LKIYNSLTRSKTEFVPIVPGHITWYCCGPTVYDHSHMGHARNYVSTDICRRIFQDYFGYN 97

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V +++N+TDIDDKII  ARQ++
Sbjct: 98  -VKFIQNVTDIDDKIIIAARQQY 119


>gi|323335869|gb|EGA77147.1| YNL247W-like protein [Saccharomyces cerevisiae Vin13]
          Length = 767

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 131/230 (56%), Gaps = 19/230 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDT---SSIP 160
           Q+F  D   L  L PT   R + ++P++I  +Q II +G+AY  ++  + FDT      P
Sbjct: 243 QKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSP 302

Query: 161 NYG-----SFSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGR 212
           N+       +++ ++D    G      +    KK+  DF LWK S   EP WESPWG+GR
Sbjct: 303 NHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDFALWKASKAGEPEWESPWGKGR 362

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L+
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +EG+KMSKS  NFITI E L  KKF  R      +RLA     +   +DF
Sbjct: 423 IEGQKMSKSLKNFITIQEAL--KKFSPRQ-----LRLAFASVQWNNQLDF 465



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 57/86 (66%), Gaps = 6/86 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRM---YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +K+YN+L R   EF  I  S  R    Y CGPTVYD +H+G+AR  +  D+  R+++ Y+
Sbjct: 36  LKLYNSLTRSKVEF--IPQSGNRXVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V +V+N+TDIDDKII RARQ +
Sbjct: 94  GYD-VQFVQNVTDIDDKIILRARQNY 118


>gi|28856175|gb|AAH48039.1| Cars protein [Danio rerio]
          Length = 652

 Score =  170 bits (431), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 133/251 (52%), Gaps = 20/251 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
           N   S++      ++ KD   L  L P    R + ++P+++  ++ I+ +G+ YE+N  +
Sbjct: 208 NSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGYESNGSV 267

Query: 153 IFDTS---SIP--NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTP 199
            FDT+   S P  +Y       + +QK        +         K++  DF LWK S P
Sbjct: 268 YFDTAKFDSCPAHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFALWKASKP 327

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP W+SPWG GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS      +
Sbjct: 328 GEPSWDSPWGMGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFESD 387

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
                ++H G L + G KMSKS  NFITI + L           A  +RLA LM  +++ 
Sbjct: 388 YWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALAKHT-------ARQLRLAFLMHSWKDT 440

Query: 320 IDFTVQRLTEA 330
           +D++   +  A
Sbjct: 441 LDYSNNTMESA 451



 Score = 83.2 bits (204), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 27  KLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILKNYF-K 85

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ +
Sbjct: 86  YDVFYCMNITDIDDKIIKRARQNY 109


>gi|6324082|ref|NP_014152.1| hypothetical protein YNL247W [Saccharomyces cerevisiae S288c]
 gi|1730840|sp|P53852|SYC_YEAST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1255971|emb|CAA65497.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1302287|emb|CAA96154.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285814418|tpg|DAA10312.1| TPA: hypothetical protein YNL247W [Saccharomyces cerevisiae S288c]
          Length = 767

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 131/230 (56%), Gaps = 19/230 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDT---SSIP 160
           Q+F  D   L  L PT   R + ++P++I  +Q II +G+AY  ++  + FDT      P
Sbjct: 243 QKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSP 302

Query: 161 NYG-----SFSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGR 212
           N+       +++ ++D    G      +    KK+  DF LWK S   EP WESPWG+GR
Sbjct: 303 NHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDFALWKASKAGEPEWESPWGKGR 362

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L+
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +EG+KMSKS  NFITI E L  KKF  R      +RLA     +   +DF
Sbjct: 423 IEGQKMSKSLKNFITIQEAL--KKFSPRQ-----LRLAFASVQWNNQLDF 465



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V+N+TDIDDKII RARQ +
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNY 118


>gi|151944300|gb|EDN62578.1| conserved protein [Saccharomyces cerevisiae YJM789]
          Length = 767

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 131/230 (56%), Gaps = 19/230 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDT---SSIP 160
           Q+F  D   L  L PT   R + ++P++I  +Q II +G+AY  ++  + FDT      P
Sbjct: 243 QKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSP 302

Query: 161 NYG-----SFSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGR 212
           N+       +++ ++D    G      +    KK+  DF LWK S   EP WESPWG+GR
Sbjct: 303 NHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDFALWKASKAGEPEWESPWGKGR 362

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L+
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +EG+KMSKS  NFITI E L  KKF  R      +RLA     +   +DF
Sbjct: 423 IEGQKMSKSLKNFITIQEAL--KKFSPRQ-----LRLAFASVQWNNQLDF 465



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V+N+TDIDDKII RARQ +
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNY 118


>gi|325093822|gb|EGC47132.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 806

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 146/269 (54%), Gaps = 26/269 (9%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  SI   +T K   +F++D   L  L P    R T ++P
Sbjct: 212 DVQDVLLEYLDSIHGSSIRGEDRSIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 271

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD ++    G S++R         K+  +  G    
Sbjct: 272 EIVSFVERIVKHKFGYVTSDGSVYFDITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 331

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 332 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 391

Query: 241 IFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHH+NE+AQS       CA   +   N ++H G L+++G KMSKS  NF TI E L+ 
Sbjct: 392 AFPHHDNELAQSEAYWHETCAH--DHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDK 449

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             +  RS     +R+  L++ +++ I+ T
Sbjct: 450 GDWTPRS-----LRIVFLLSAWKDGIEIT 473



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 6/85 (7%)

Query: 5   IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V ++ NITD+DDK+    RQ H
Sbjct: 85  KFDVEFIMNITDVDDKV---GRQHH 106


>gi|256272357|gb|EEU07340.1| YNL247W-like protein [Saccharomyces cerevisiae JAY291]
          Length = 767

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 131/230 (56%), Gaps = 19/230 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDT---SSIP 160
           Q+F  D   L  L PT   R + ++P++I  +Q II +G+AY  ++  + FDT      P
Sbjct: 243 QKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSP 302

Query: 161 NYG-----SFSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGR 212
           N+       +++ ++D    G      +    KK+  DF LWK S   EP WESPWG+GR
Sbjct: 303 NHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDFALWKASKAGEPEWESPWGKGR 362

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L+
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +EG+KMSKS  NFITI E L  KKF  R      +RLA     +   +DF
Sbjct: 423 IEGQKMSKSLKNFITIQEAL--KKFSPRQ-----LRLAFASVQWNNQLDF 465



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V+N+TDIDDKII RARQ +
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNY 118


>gi|257056300|ref|YP_003134132.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586172|gb|ACU97305.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 382

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/359 (30%), Positives = 173/359 (48%), Gaps = 43/359 (11%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA- 83
            +R+Y CG T YD  H+G+A   +  D L R+LR    E  V   RN+TD+DD +   A 
Sbjct: 30  RVRIYACGITPYDVTHLGHATTFVWVDTLRRVLRVLGVEPVV--CRNVTDVDDVLDAAAH 87

Query: 84  ----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
               R +H             + +  +F  D + L    P ++PRA  ++  +I L   +
Sbjct: 88  RAGIRYDH-----------YAAFHELRFTDDMSALGVSIPDYEPRAHRYVDTVIRLAAAL 136

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-------QKMGTRVPEKYHKKNPADFI 192
              G AY  +  + F   S+      +R ++DE       ++ G R P+   K++P D  
Sbjct: 137 AESGAAYVRDGGVYFRGRSV-----VARSQLDEGTALRLAREYGGR-PDDPAKEDPFDVA 190

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           +W+ + P  P W+SPWG GRPGWH EC AMS+   G   DIH GG DL FPHH    A +
Sbjct: 191 VWQPAEPEHPAWDSPWGPGRPGWHAECVAMSATTFGPCVDIHAGGADLRFPHHAYHAAMA 250

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                +   A  W   G + ++G KM+KS  N + + +LL+T       +PA V+RLA++
Sbjct: 251 EAFTGVTPYARAWFRVGTVTVDGEKMAKSADNLVLVRDLLQT-------YPAAVVRLAII 303

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-GIIDPAVLSA----LYNDLNTVSAIQ 366
              + +P ++    L  A   L    Q +  + G  D A ++     L +DL+  +A+ 
Sbjct: 304 DRPWAQPWEYAPGVLDVAAARLEDLHQAAGRRVGHTDEAGVAQLRQLLADDLDVPAALD 362


>gi|256825221|ref|YP_003149181.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|310947190|sp|C7NHQ9|MSHC_KYTSD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256688614|gb|ACV06416.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 438

 Score =  170 bits (430), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/364 (31%), Positives = 176/364 (48%), Gaps = 45/364 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++++T    IT           +YVCG T YD  H+G+A   + FD++ R LR       
Sbjct: 20  RVHDTARGAITPLTPRPGQEAGLYVCGITPYDATHLGHAATYLTFDLVNRALRA--AGHP 77

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQP 123
           V +V+N+TD+D+ ++ERA +        D +    + S+  Q F  D   L  +AP    
Sbjct: 78  VRFVQNVTDVDEPLLERAER--------DGVHWEELASREIQLFRDDMAALRIIAPDAYV 129

Query: 124 RATNHIPQMIYLIQNIILHGHAYE------------ANNEIIFDTSSIPNYGSFSR---- 167
            A   IP  +  I+ ++  G AY             +  ++  D + +P +G  S     
Sbjct: 130 GAVEGIPSDVAAIRAMLESGRAYRVPAEDAAADAGESPADVYLDLAQVPTFGEVSHWTPT 189

Query: 168 --RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSS 224
              ++   + G   P++  K++  D +LW+     EP WE    G GRPGWHIEC+ ++ 
Sbjct: 190 QMMEVFADRGGD--PDRAGKRDRLDPLLWRAHREGEPHWEGGSLGAGRPGWHIECTTIAR 247

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            +LG  F + GGG DL+FPHHE   AQ+    D  +  A  ++H   + L+G KMSKS G
Sbjct: 248 DHLGTPFLVQGGGDDLVFPHHEMSAAQTRALTD--DAFAEHYVHQAMVGLDGEKMSKSKG 305

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---PQT 340
           N + ++ L    +  G   PA  IRLA+L  HYR   ++T   L  A   L +W    QT
Sbjct: 306 NLVLVSRL----RAAGED-PA-AIRLALLSQHYRTAWEWTDAHLEAARQRLDRWRHAAQT 359

Query: 341 STSK 344
           +T+ 
Sbjct: 360 ATAS 363


>gi|207341909|gb|EDZ69841.1| YNL247Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 610

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 131/230 (56%), Gaps = 19/230 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSI---P 160
           Q+F  D   L  L PT   R + ++P++I  +Q II +G+AY  ++  + FDT      P
Sbjct: 243 QKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSP 302

Query: 161 NYG-----SFSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGR 212
           N+       +++ ++D    G      +    KK+  DF LWK S   EP WESPWG+GR
Sbjct: 303 NHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDFALWKASKAGEPEWESPWGKGR 362

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L+
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +EG+KMSKS  NFITI E L  KKF  R      +RLA     +   +DF
Sbjct: 423 IEGQKMSKSLKNFITIQEAL--KKFSPRQ-----LRLAFASVQWNNQLDF 465



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V+N+TDIDDKII RARQ +
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNY 118


>gi|169646833|ref|NP_001112372.1| cysteinyl-tRNA synthetase, cytoplasmic [Danio rerio]
          Length = 824

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 133/251 (52%), Gaps = 20/251 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
           N   S++      ++ KD   L  L P    R + ++P+++  ++ I+ +G+ YE+N  +
Sbjct: 287 NSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGYESNGSV 346

Query: 153 IFDTS---SIP--NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTP 199
            FDT+   S P  +Y       + +QK        +         K++  DF LWK S P
Sbjct: 347 YFDTAKFDSCPAHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFALWKASKP 406

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP W+SPWG GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS      +
Sbjct: 407 GEPSWDSPWGMGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFEND 466

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
                ++H G L + G KMSKS  NFITI + L           A  +RLA LM  +++ 
Sbjct: 467 YWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALAKHT-------ARQLRLAFLMHSWKDT 519

Query: 320 IDFTVQRLTEA 330
           +D++   +  A
Sbjct: 520 LDYSNNTMESA 530



 Score = 83.2 bits (204), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 106 KLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILKNYF-K 164

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII+RARQ +
Sbjct: 165 YDVFYCMNITDIDDKIIKRARQNY 188


>gi|238878314|gb|EEQ41952.1| cysteinyl-tRNA synthetase [Candida albicans WO-1]
          Length = 781

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 20/250 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDT------- 156
           +++ +D  RL  L P+   R + ++P +I  +  I+ +G+AY+ ++  + FDT       
Sbjct: 251 KRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNGYAYKTDDGSVYFDTVKYEHSQ 310

Query: 157 ---SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
              + +  +       I++ +    V     K+N +DF LWK S P EP W+S WG+GRP
Sbjct: 311 HDYAKLQPWSKGDMSLINDGEGSLSVSNT--KRNASDFALWKASKPGEPAWDSKWGKGRP 368

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L++
Sbjct: 369 GWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLHI 428

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           +G+KMSKS  NFITI+E L    F  R      +RL   +  + +P+DF    ++E + +
Sbjct: 429 QGQKMSKSLKNFITIDEALND--FSARQ-----LRLVFALNAWEKPLDFKDSLISEVKSI 481

Query: 334 LSKWPQTSTS 343
            S + +  T+
Sbjct: 482 ESTFSKFFTN 491



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KIYN+L R   EF    P +I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 43  KPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYF 102

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + +V+N+TDIDDKII  ARQ++
Sbjct: 103 GYN-IKFVQNVTDIDDKIIIAARQQY 127


>gi|115944413|ref|XP_001195853.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 694

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 130/242 (53%), Gaps = 20/242 (8%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            S++      +F  D   L  L      R + ++P++I  +Q II  G  YE+N  + F 
Sbjct: 201 FSVLPQHWEAEFHSDMNALNVLPADVLTRVSEYVPEVIDYVQKIIDRGFGYESNGSVYFT 260

Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV------------PEKYHKKNPA-DFILWKRSTPMEP 202
           TS   N  S    K+  +  G +             P++  +K  A DF LWK S P EP
Sbjct: 261 TSKFDNDDSHHYAKLVPEAYGDQAALAEGEGDLSISPDQLQEKQSANDFALWKNSKPGEP 320

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            WESPWG GRPGWHIECSAM+S  LG+  DIH GG DL FPHH+NE+AQ+      +   
Sbjct: 321 EWESPWGMGRPGWHIECSAMASSILGESMDIHTGGADLKFPHHDNELAQAEAHYGNDDWV 380

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             ++H+G L ++G KMSKS  NFITI + LET       + +  IRL  L+  +++ +D+
Sbjct: 381 RYFLHSGHLTIQGCKMSKSLKNFITIKQALET-------YSSRQIRLVFLLHSWKDTLDY 433

Query: 323 TV 324
           + 
Sbjct: 434 ST 435



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K +++ +N+L R+   F   +   +  Y CGPTVYD AH+G+AR  I FD+L R++  Y+
Sbjct: 23  KAQLRHFNSLTRQKELFVPQEGKRVSWYSCGPTVYDAAHMGHARSYISFDILRRVMTKYF 82

Query: 62  GEKCVTYVRNITDIDDKIIERAR 84
               VTYV NITD+DDKII+RAR
Sbjct: 83  NYD-VTYVMNITDVDDKIIKRAR 104


>gi|68467189|ref|XP_722256.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
 gi|68467418|ref|XP_722142.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
 gi|46444091|gb|EAL03368.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
 gi|46444215|gb|EAL03491.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
          Length = 781

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 20/250 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDT------- 156
           +++ +D  RL  L P+   R + ++P +I  +  I+ +G+AY+ ++  + FDT       
Sbjct: 251 KRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNGYAYKTDDGSVYFDTVKYEHSQ 310

Query: 157 ---SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
              + +  +       I++ +    V     K+N +DF LWK S P EP W+S WG+GRP
Sbjct: 311 HDYAKLQPWSKGDMSLINDGEGSLSVSNT--KRNASDFALWKASKPGEPAWDSKWGKGRP 368

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L++
Sbjct: 369 GWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLHI 428

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           +G+KMSKS  NFITI+E L    F  R      +RL   +  + +P+DF    ++E + +
Sbjct: 429 QGQKMSKSLKNFITIDEALND--FSARQ-----LRLVFALNAWEKPLDFKDSLISEVKSI 481

Query: 334 LSKWPQTSTS 343
            S + +  T+
Sbjct: 482 ESTFSKFFTN 491



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KIYN+L R   EF    P +I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 43  KPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYF 102

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + +V+N+TDIDDKII  ARQ++
Sbjct: 103 GYN-IKFVQNVTDIDDKIIIAARQQY 127


>gi|312374234|gb|EFR21828.1| hypothetical protein AND_16292 [Anopheles darlingi]
          Length = 744

 Score =  169 bits (429), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 94/248 (37%), Positives = 135/248 (54%), Gaps = 23/248 (9%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           +F KD   L  L      R + ++P+++  I+ II  G AYEAN  + FD +        
Sbjct: 214 EFHKDMRALNVLPADVLTRVSEYVPEIVTYIERIIERGLAYEANGSVYFDVARFDGRPEH 273

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG   + +  E  + T       K++P DF LWK S   EP W+SPWG+GR
Sbjct: 274 HYAKLVPEAYGDARQLQEGEGDLSTGEDRLGEKRSPNDFALWKASKAGEPWWDSPWGKGR 333

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S   G   DIH GG+DL FPHH+NE+AQS   D   +    ++H G L 
Sbjct: 334 PGWHIECSAMASAICGDYLDIHTGGVDLKFPHHDNELAQSEAHDGSSEWVKYFLHTGHLT 393

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTE 329
           + G KMSKS  NF+TI + LE          A  +RLA L+  +++ +D+   T++   +
Sbjct: 394 IAGCKMSKSLKNFVTIQQALERHT-------ATQLRLAFLLHSWKDTLDYSDNTMEMAVQ 446

Query: 330 AEILLSKW 337
            E LL+++
Sbjct: 447 YERLLNEF 454



 Score = 92.8 bits (229), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R+   F   D  N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G 
Sbjct: 19  RLHLYNSLTRRKELFVPRDGRNVQWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFGY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V YV NITDIDDKII+RARQ H
Sbjct: 79  N-VLYVMNITDIDDKIIKRARQNH 101


>gi|212535374|ref|XP_002147843.1| cysteinyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210070242|gb|EEA24332.1| cysteinyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 798

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 132/238 (55%), Gaps = 18/238 (7%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T K  ++F++D   L  L P    R T + PQ+   ++ I+ +  AY  ++  + FD  
Sbjct: 240 LTRKYEERFMRDLRDLNVLDPDELTRVTEYGPQIAQFVERIVENKFAYVTSDGSVYFDIK 299

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +  + G         S S  K+  +  G    +   K +P+DF LWK S P EP W S W
Sbjct: 300 AFEDAGFPYARLEPWSRSDGKLVAEGEGALTSKTTEKHSPSDFALWKASKPGEPSWSSQW 359

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIW 265
           G+GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS         ++  N +
Sbjct: 360 GKGRPGWHIECSAMASDRLGKSIDIHSGGIDLAFPHHDNELAQSEAYWNTHTHDQWINYF 419

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +H G L+++G KMSKS  NF TI E LE K +  RS     +R+  L+ ++   I+ T
Sbjct: 420 LHMGHLSIQGSKMSKSLKNFTTIREALERKDWTSRS-----LRIVFLLGNWNSGIEIT 472



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 15/109 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L +    F  +DP+   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y+ 
Sbjct: 24  LKIYNSLTKTKVPFVPVDPNGRKVTWYACGPTVYDDSHLGHARNYVTTDIIRRILRDYF- 82

Query: 63  EKCVTYVRNITDIDDKIIERARQE---------HPSIPINDAISIITSK 102
           +  V +V NITD+DDKII R RQ+         HP+I   DA  + T+K
Sbjct: 83  KFDVHFVMNITDVDDKIILRGRQQYLFNKFVSAHPTI---DATVLDTAK 128


>gi|115741226|ref|XP_001190614.1| PREDICTED: similar to Cars protein, partial [Strongylocentrotus
           purpuratus]
          Length = 596

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 131/245 (53%), Gaps = 20/245 (8%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            S++      +F  D   L  L      R + ++P++I  +Q II  G  YE+N  + F 
Sbjct: 201 FSVLPQHWEAEFHSDMNALNVLPADVLTRVSEYVPEVIDYVQKIIDRGFGYESNGSVYFT 260

Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV------------PEKYHKKNPA-DFILWKRSTPMEP 202
           TS   N  S    K+  +  G +             P++  +K  A DF LWK S P EP
Sbjct: 261 TSKFDNDDSHHYAKLVPEAYGDQAALAEGEGDLSISPDQLQEKQSANDFALWKNSKPGEP 320

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            WESPWG GRPGWHIECSAM+S  LG+  DIH GG DL FPHH+NE+AQ+      +   
Sbjct: 321 EWESPWGMGRPGWHIECSAMASSILGESMDIHTGGADLKFPHHDNELAQAEAHYGNDDWV 380

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             ++H+G L ++G KMSKS  NFITI + LET       + +  IRL  L+  +++ +D+
Sbjct: 381 RYFLHSGHLTIQGCKMSKSLKNFITIKQALET-------YSSRQIRLVFLLHSWKDTLDY 433

Query: 323 TVQRL 327
           +   +
Sbjct: 434 STATM 438



 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K +++ +N+L R+   F   +   +  Y CGPTVYD AH+G+AR  I FD+L R++  Y+
Sbjct: 23  KAQLRHFNSLTRQKELFVPQEGKRVSWYSCGPTVYDAAHMGHARSYISFDILRRVMTKYF 82

Query: 62  GEKCVTYVRNITDIDDKIIERAR 84
               VTYV NITD+DDKII+RAR
Sbjct: 83  NYD-VTYVMNITDVDDKIIKRAR 104


>gi|58332582|ref|NP_001011365.1| cysteinyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana)
           tropicalis]
 gi|82232096|sp|Q5M7N8|SYCC_XENTR RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56788842|gb|AAH88531.1| cysteinyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 747

 Score =  169 bits (429), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 127/238 (53%), Gaps = 20/238 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           ++ +D   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + F T+        
Sbjct: 221 EYHRDMEALNVLPPDVLTRVSEYVPEIVAFVQRIVDNGYGYVSNGSVYFSTAKFHASEKH 280

Query: 162 -YGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            Y       + +QK        +         K++P DF LWK S P EP WESPWG+GR
Sbjct: 281 YYAKLVPEAVGDQKALQEGEGDLSISADRLSEKQSPNDFALWKASKPGEPSWESPWGKGR 340

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS      +     ++H G L 
Sbjct: 341 PGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFDNDHWVRYFLHTGHLT 400

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + G KMSKS  NFITI + L+          A  +RLA LM  +++ +D++   +  A
Sbjct: 401 IAGCKMSKSLKNFITIKDALQKNT-------ARQLRLAFLMHAWKDTLDYSSNTMESA 451



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/83 (51%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R    F   D + +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ + 
Sbjct: 28  LRLYNSLTRSKELFVPQDGNKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-KY 86

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V Y  NITDIDDKII+RARQ H
Sbjct: 87  DVFYCMNITDIDDKIIKRARQRH 109


>gi|323352855|gb|EGA85157.1| YNL247W-like protein [Saccharomyces cerevisiae VL3]
          Length = 637

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 131/230 (56%), Gaps = 19/230 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSI---P 160
           Q+F  D   L  L PT   R + ++P++I  +Q II +G+AY  ++  + FDT      P
Sbjct: 243 QKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFDTLKFDKSP 302

Query: 161 NYG-----SFSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGR 212
           N+       +++ ++D    G      +    KK+  DF LWK S   EP WESPWG+GR
Sbjct: 303 NHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDFALWKASKAGEPEWESPWGKGR 362

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L+
Sbjct: 363 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINYFLHTGHLH 422

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +EG+KMSKS  NFITI E L  KKF  R      +RLA     +   +DF
Sbjct: 423 IEGQKMSKSLKNFITIQEAL--KKFSPRQ-----LRLAFASVQWNNQLDF 465



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V+N+TDIDDKII RARQ +
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNY 118


>gi|46123171|ref|XP_386139.1| hypothetical protein FG05963.1 [Gibberella zeae PH-1]
          Length = 800

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 130/239 (54%), Gaps = 20/239 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    + F  D   L  L P    R T ++PQ+   ++ I+  G AYEA+  + FD ++
Sbjct: 212 LTQSMEKLFTDDMDALNVLRPDVITRVTEYVPQIADFVKTIVDKGFAYEADGSVYFDITA 271

Query: 159 IPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R        + + E+  G+       KKNP DF LWK+S   EP W SPWG
Sbjct: 272 FEKAGNTYARLRPDNRNDKSLQEEGEGSLSKGLSGKKNPGDFALWKKSKAGEPFWSSPWG 331

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEKT-ANI 264
            GRPGWHIECS M+   LG   DIH GG+DL FPHH+NE+AQS    C   + E T  N 
Sbjct: 332 DGRPGWHIECSVMAGAVLGSNMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVNY 391

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           ++H G L++ G KMSKS  NF TI + L T      ++ +  +R+  LM  + + ++ +
Sbjct: 392 FLHMGHLSISGSKMSKSLKNFQTIQDALAT------TYSSRGMRIVFLMGRWNDGVEIS 444



 Score = 56.6 bits (135), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 78/138 (56%), Gaps = 13/138 (9%)

Query: 3   KKIKIYNTLERKI-TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +K+YN+L+      F  I+   +  Y CGPTVYD +H+G+AR  +  D++ R+L +Y+
Sbjct: 2   ESLKLYNSLKPGAPVPFVPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRILMHYF 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V +V NITDIDDKII +AR++           ++  +  + + KD  R   LA   
Sbjct: 62  GFE-VKFVMNITDIDDKIIIKARRQR----------LLELEKNKNYSKDELRDLALA-AF 109

Query: 122 QPRATNHIPQMIYLIQNI 139
           Q  A + +P ++   ++I
Sbjct: 110 QAYAKSSLPLLLKDGEDI 127


>gi|328716861|ref|XP_001946257.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Acyrthosiphon pisum]
 gi|328716863|ref|XP_003246061.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Acyrthosiphon pisum]
          Length = 723

 Score =  169 bits (428), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 88/237 (37%), Positives = 132/237 (55%), Gaps = 22/237 (9%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F  + + L  L P    R + ++P+ I  I+ II +G+AYE+N  + FD ++  +     
Sbjct: 204 FHSNMSSLNILPPDKLSRVSEYVPETIAYIETIIKNGYAYESNGSVYFDVAAFDSQPIHH 263

Query: 162 --------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
                   YG     +  E  + T    +  K++P DF LWK+S   EP W+SPWG+GRP
Sbjct: 264 YAKLVPEAYGDSKSLQDGEGDLTTSAVNE--KRSPNDFALWKKSKKGEPWWDSPWGKGRP 321

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S  LG+  DIH GG+DL FPHH+NEIAQ+      E+    ++H+G L +
Sbjct: 322 GWHIECSVMASCILGQTLDIHTGGIDLKFPHHDNEIAQAEAYYNNEEWVRYFLHSGHLTI 381

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            G KMSKS  NFITI + L+          +  +RLA L+  +++ +D++   +  A
Sbjct: 382 SGCKMSKSLKNFITIEDALKNN-------TSRQLRLAFLLHSWKDTLDYSESTMESA 431



 Score = 87.4 bits (215), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 43/84 (51%), Positives = 59/84 (70%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K++N+L RK   F   + + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+  
Sbjct: 19  RLKLFNSLTRKKEIFIPKNGNKVHWYSCGPTVYDASHMGHARSYITFDILRRVLKDYFHY 78

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V YV NITDIDDKII+RARQ H
Sbjct: 79  D-VEYVMNITDIDDKIIKRARQLH 101


>gi|115401840|ref|XP_001216508.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
 gi|114190449|gb|EAU32149.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
          Length = 777

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/319 (34%), Positives = 159/319 (49%), Gaps = 49/319 (15%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +T K  ++F +D   L  LAP    R T ++PQ++  ++ I+ +G  Y   +  + FD  
Sbjct: 209 LTQKFERRFFEDMNALNVLAPDQLTRVTEYVPQIVRFVEKIVANGFGYATPDGSVYFDID 268

Query: 158 SIPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           S    G ++SR        R +     G+    +  K+N   F LWK S P EP W SPW
Sbjct: 269 SFEKAGHNYSRLEPWNKNDRALQADGEGSLSKGRSMKRNENHFALWKASKPGEPAWPSPW 328

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ-----SCCADRIEKTAN 263
           G GRPGWHIECSAM+S  +GK  DIH GG+DL FPHH+NE+AQ     S    +++ T N
Sbjct: 329 GYGRPGWHIECSAMASEVIGKTIDIHSGGVDLRFPHHDNELAQSEAYWSTPGCQVQWT-N 387

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            +IH G L + G KMSKS  N+ TI   L  K++  RS     +R+  L+  +++ I+ T
Sbjct: 388 YFIHMGQLRIRGLKMSKSLKNYTTIRTFLSQKEWSARS-----LRICFLLMPWQDGIEIT 442

Query: 324 VQRLTEAEI------------LLSKWPQTSTSK----GIIDPAVL-----------SALY 356
              L +A +             L  W  T T+     GI D  +L           +AL 
Sbjct: 443 -DELMKAVVSWEDKLNNFFLKSLDIWKSTKTATMQEPGIADQQLLNALDKAKADVDTALC 501

Query: 357 NDLNTVSAIQALHKLARES 375
           +  NT + ++ L  L  ES
Sbjct: 502 DSFNTPAVMRILSDLVTES 520



 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 42/61 (68%), Gaps = 2/61 (3%)

Query: 4  KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          ++KIYN+L R   +F  +DP+   +  Y CGPTVY+ AH+G+A+  +  D++ R+++ Y+
Sbjct: 24 RLKIYNSLTRTKNDFIPLDPTGKVVTWYGCGPTVYEDAHLGHAKNYVSTDIIRRIMQDYF 83

Query: 62 G 62
          G
Sbjct: 84 G 84


>gi|159490726|ref|XP_001703324.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280248|gb|EDP06006.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 665

 Score =  169 bits (428), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/257 (38%), Positives = 140/257 (54%), Gaps = 22/257 (8%)

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG 163
            ++F++D   L C  P    R + +IP++I  +  II +G AY +N  + FDT +     
Sbjct: 224 AREFLEDMDALGCRRPDVLTRVSEYIPEIIEYVTRIIGNGMAYASNGSVYFDTQN----- 278

Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
            FS     E   G    E   K++P DF LWK + P EP WESPWG GRPGWHIECSAM+
Sbjct: 279 -FSAALAAE---GESNFETSEKRSPQDFALWKAAKPGEPAWESPWGVGRPGWHIECSAMA 334

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DRIEKTANIWIHNGFLNLEGRKMSK 280
           S  +G   DIH GG DL FPHH+NE+AQ+      D  ++  N ++H G L++EG KMSK
Sbjct: 335 SSIIGSRLDIHTGGEDLRFPHHDNELAQAEAYYHHDGCKQWVNYFLHCGHLHIEGLKMSK 394

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S  NF+TI E L +  F  R      +RL   +  + + + +  Q  TE ++   +  Q 
Sbjct: 395 SLKNFVTIREALAS--FNARQ-----LRLMFCLQPWNKTMMYGEQSRTEMKV---REAQL 444

Query: 341 STSKGIIDPAVLSALYN 357
               G +D A+ ++  N
Sbjct: 445 RNFFGNVDAAIRNSSVN 461



 Score = 76.6 bits (187), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 57/84 (67%), Gaps = 4/84 (4%)

Query: 5   IKIYNT-LERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +YN+ ++ K+    A  P++  I  Y CGPTVYD AH+G+AR  + FD++ R+L  Y+
Sbjct: 25  LMLYNSFVDEKVPFVPAAGPTSKQITWYACGPTVYDVAHMGHARNYLSFDIVRRVLEDYF 84

Query: 62  GEKCVTYVRNITDIDDKIIERARQ 85
           G  C+  V N+TD+DDKII RAR+
Sbjct: 85  GYNCLM-VMNVTDVDDKIILRARR 107


>gi|242792877|ref|XP_002482046.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218718634|gb|EED18054.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 828

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/238 (39%), Positives = 130/238 (54%), Gaps = 18/238 (7%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T K   +F+KD   L  L P    R T + PQ+   ++ I+ +  AY  ++  + FD  
Sbjct: 270 LTKKYEGRFMKDLRDLNVLDPDELTRVTEYGPQIAQFVERIVENKFAYVTSDGSVYFDIK 329

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G         S S  K+  +  GT   +   K + +DF LWK S P EP W S W
Sbjct: 330 AFEEAGFPYARLEPWSKSDGKLIAEGEGTLTSKTTEKHSLSDFALWKASKPGEPSWSSQW 389

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIW 265
           G+GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS         ++  N +
Sbjct: 390 GKGRPGWHIECSAMASDRLGKTIDIHSGGIDLAFPHHDNELAQSEAYWNTHTHDQWINYF 449

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +H G L+++G KMSKS  NF TI E LE K +  RS     +R+  L+ H+   I+ T
Sbjct: 450 LHMGHLSIQGSKMSKSLKNFTTIREALERKDWTSRS-----LRIVFLLGHWNGGIEIT 502



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 47/109 (43%), Positives = 67/109 (61%), Gaps = 15/109 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L +    F  IDP+   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y+ 
Sbjct: 54  LKIYNSLTKSKVPFVPIDPNGRKVTWYACGPTVYDDSHLGHARNYVTTDIIRRILRDYF- 112

Query: 63  EKCVTYVRNITDIDDKIIERARQE---------HPSIPINDAISIITSK 102
           +  V +V NITD+DDKII R RQ+         HP+I   DA  + T+K
Sbjct: 113 KFDVHFVMNITDVDDKIILRGRQQYLFNKFVSAHPTI---DATVLDTAK 158


>gi|196019398|ref|XP_002118971.1| hypothetical protein TRIADDRAFT_62948 [Trichoplax adhaerens]
 gi|190577490|gb|EDV18543.1| hypothetical protein TRIADDRAFT_62948 [Trichoplax adhaerens]
          Length = 257

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/252 (38%), Positives = 144/252 (57%), Gaps = 17/252 (6%)

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPW  GRPGWHIECS MS  YLG  FDIHGGG+DL+F HHENEIAQS C  +  K AN W
Sbjct: 5   SPWSDGRPGWHIECSVMSKKYLGDNFDIHGGGIDLVFXHHENEIAQSVCESKSNKFANYW 64

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +HNGFL +   KMSKS  NFIT+ ELL+ K  GG       +R   L  +YR+P+DF  +
Sbjct: 65  VHNGFLTVNSEKMSKSLKNFITVKELLD-KGVGGAE-----LRYFYLTANYRKPLDFNEK 118

Query: 326 RLTEAEILLSKWPQTSTSKGI--------IDPAVLSALYNDLNTVSAIQALHKLARESTK 377
            L +++  +SK+ +      I        +    L  + +DLNT  A+  +H+LA ++  
Sbjct: 119 ALLDSKKSISKFQKCIQKFNIKFDEISYELPDEFLKYISDDLNTPLALSFIHQLANKALD 178

Query: 378 NHD--LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            ++     ++N     LG+++ ++  +  I+  +  L ++R  L   K +  AD +R ++
Sbjct: 179 GNENSANDVYNC-CKFLGLDIKEKEEDIYITQEVINLAEKRKQLKIDKNWQEADKVRIEI 237

Query: 436 ESKGFILEDYKN 447
           E  G+ + D K+
Sbjct: 238 EKLGYKVIDIKD 249


>gi|241950257|ref|XP_002417851.1| cysteine-tRNA ligase, putative; cysteinyl-tRNA synthetase, putative
           [Candida dubliniensis CD36]
 gi|223641189|emb|CAX45566.1| cysteine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 780

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 20/250 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDT------- 156
           +++ +D  RL  L P+   R + ++P +I  +  I+ +G+AY+ ++  + FDT       
Sbjct: 250 KRYNEDMARLNVLPPSITTRVSEYMPDIIEFVDKIVSNGYAYKTDDGSVYFDTVKYEHSQ 309

Query: 157 ---SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
              + +  +       I++ +    V     K+N +DF LWK S P EP W+S WG+GRP
Sbjct: 310 HDYAKLQPWSKGDMSLINDGEGSLSVSNT--KRNASDFALWKASKPGEPAWDSKWGKGRP 367

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L++
Sbjct: 368 GWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFMHNGHLHI 427

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           +G+KMSKS  NFITI+E L    F  R      +RL   +  + +P+DF    ++E + +
Sbjct: 428 QGQKMSKSLKNFITIDEAL--NDFSARQ-----LRLVFALNAWEKPLDFKDSLISEVKSI 480

Query: 334 LSKWPQTSTS 343
            S + +  T+
Sbjct: 481 ESTFSKFFTN 490



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  ++IYN+L R   EF    P +I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 42  KPTLRIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYF 101

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + +V+N+TDIDDKII  ARQ++
Sbjct: 102 GYN-IKFVQNVTDIDDKIIIAARQQY 126


>gi|39940736|ref|XP_359905.1| hypothetical protein MGG_04872 [Magnaporthe oryzae 70-15]
 gi|145010901|gb|EDJ95557.1| hypothetical protein MGG_04872 [Magnaporthe oryzae 70-15]
          Length = 803

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 133/247 (53%), Gaps = 20/247 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T +    F  D   L  L P    R T ++PQ+   +  I+  G AYE+   + FD ++
Sbjct: 213 LTRRMEADFFDDMDNLNNLRPDEITRVTEYVPQIADFVDRIVKKGFAYESEGSVYFDIAA 272

Query: 159 IPNYG-SFSRRK--------IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R K        + E+  G+       K++P DF LWK+S P EP W SPWG
Sbjct: 273 FEKGGNTYARLKPESRGDKALQEEGEGSLSKGAGGKRSPGDFALWKQSKPGEPYWPSPWG 332

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEKT-ANI 264
            GRPGWHIECS M+S  LG   D+H GG+DL FPHH+NE+AQS    C   + E T    
Sbjct: 333 NGRPGWHIECSVMASDRLGAQMDVHSGGIDLAFPHHDNELAQSEAYYCEHGKGEHTWVKY 392

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G L++ G KMSKS  NF TI + L T      ++ A  +R+  +M  + E ++ + 
Sbjct: 393 FLHMGHLSISGSKMSKSLKNFQTIKDALAT------TYSARNLRIVFMMGRWNEGVEISP 446

Query: 325 QRLTEAE 331
           +   +A+
Sbjct: 447 ELRVQAD 453



 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 5  IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          IK++N+L+      F+  +  N+  Y CGPTVYD +H+G+AR  +  D++ R+  +Y+  
Sbjct: 6  IKVHNSLQPGGPVPFEPKEKGNVSWYACGPTVYDQSHLGHARNYVSTDIIRRIFLHYFDY 65

Query: 64 KCVTYVRNITDIDDKIIERARQE 86
          K V +V NITDIDDKII RAR++
Sbjct: 66 K-VKFVMNITDIDDKIIIRARRQ 87


>gi|261202288|ref|XP_002628358.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239590455|gb|EEQ73036.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 801

 Score =  169 bits (427), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 26/269 (9%)

Query: 74  DIDDKIIERARQEH-PSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H  SI   D +  + +  K   +F++D   L  L P    R T ++P
Sbjct: 207 DVKDVLLEYLDSVHGSSIRGEDRLIFTKLAKKYEARFMQDVRDLNVLDPDAITRVTEYMP 266

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVP 180
           +++  ++ II H   Y  ++  + FD ++    G S++R         K+  +  G    
Sbjct: 267 EIVSFVERIIDHKFGYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEGALTK 326

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 327 KTTEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 386

Query: 241 IFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHH+NE+AQS       CAD      N ++H G L+++G KMSKS  NF TI E L+ 
Sbjct: 387 AFPHHDNELAQSEAYWHETCADH--HWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDK 444

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             +  RS     +R+  L+  +++ I+ T
Sbjct: 445 GDWTPRS-----LRIVFLLGGWKDGIEIT 468



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 13/151 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDK-IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL-ACLAPT 120
           +  V ++ NITD+DDK         HP++  +  I I  S  +    K    L A LAP 
Sbjct: 85  KFDVKFIMNITDVDDKHFFTEFVYSHPTVD-DKVIEIALSAYSAYLEKKLPLLEAGLAPE 143

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
              R  + + +    +   IL+G A + N +
Sbjct: 144 ---RYQDEVEK----VYATILNGGALDGNGK 167


>gi|320585786|gb|EFW98465.1| cysteinyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 916

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 128/239 (53%), Gaps = 20/239 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    + F  D   L  L P    R T ++PQ++   + II  G AYEAN  + FD  +
Sbjct: 223 LTQAMEKAFTDDMDALNVLRPDAVTRVTEYVPQIVAFTKGIIDKGFAYEANGSVYFDIEA 282

Query: 159 IPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R        + + E+  G+       K+   DF LWKRS P EP W SPWG
Sbjct: 283 FERAGNTYARLRPESKNDKALQEEGEGSLSKSLAGKRRAGDFALWKRSKPGEPFWASPWG 342

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWI-- 266
            GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS     R     + W+  
Sbjct: 343 AGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAFFHRPGAGEHSWVRY 402

Query: 267 --HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             H G L++ G KMSKS  NF TI + LET       + A  +R+  +++ + + ++ +
Sbjct: 403 FLHMGHLSIAGSKMSKSLKNFQTIQDALET------GYTARSMRIVFMLSRWNDGLEVS 455



 Score = 74.3 bits (181), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 36/86 (41%), Positives = 56/86 (65%), Gaps = 2/86 (2%)

Query: 2  KKKIKIYNTLERKI-TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
          +  I ++N+L+      F+      +  Y CGPTVYD +H+G+AR  +  DV+ R+LR Y
Sbjct: 9  RAGIAVHNSLKPGTPVHFEPKQEDTVTWYSCGPTVYDLSHMGHARNYVSTDVIRRILRDY 68

Query: 61 YGEKCVTYVRNITDIDDKIIERARQE 86
          +G K V ++ NITD+DDKII +AR++
Sbjct: 69 FGYK-VQFIMNITDVDDKIIIKARRK 93


>gi|239612172|gb|EEQ89159.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 801

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 26/269 (9%)

Query: 74  DIDDKIIERARQEH-PSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H  SI   D +  + +  K   +F++D   L  L P    R T ++P
Sbjct: 207 DVKDVLLEYLDSVHGSSIRGEDRLIFTKLAKKYETRFMQDVRDLNVLDPDAITRVTEYMP 266

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVP 180
           +++  ++ II H   Y  ++  + FD ++    G S++R         K+  +  G    
Sbjct: 267 EIVSFVERIIDHKFGYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEGALTK 326

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 327 KTTEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 386

Query: 241 IFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHH+NE+AQS       CAD      N ++H G L+++G KMSKS  NF TI E L+ 
Sbjct: 387 AFPHHDNELAQSEAYWHETCADH--HWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDK 444

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             +  RS     +R+  L+  +++ I+ T
Sbjct: 445 GDWTPRS-----LRIVFLLGGWKDGIEIT 468



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 13/151 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDK-IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL-ACLAPT 120
           +  V ++ NITD+DDK         HP++  +  I I  S  +    K    L A LAP 
Sbjct: 85  KFDVKFIMNITDVDDKHFFTEFVYSHPTVD-DKVIEIALSAYSAYLEKKLPLLEAGLAPE 143

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
              R  + + +    +   IL+G A + N +
Sbjct: 144 ---RYQDEVEK----VYATILNGGALDGNGK 167


>gi|240277739|gb|EER41247.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 783

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 146/269 (54%), Gaps = 26/269 (9%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  SI   +T K   +F++D   L  L P    R T ++P
Sbjct: 215 DVQDVLLEYLDSIHGSSIRGEDRSIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 274

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD ++    G S++R         K+  +  G    
Sbjct: 275 EIVSFVERIVKHKFGYVTSDGSVYFDITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 334

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LG+  DIH GG+DL
Sbjct: 335 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGEQMDIHSGGIDL 394

Query: 241 IFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHH+NE+AQS       CA   +   N ++H G L+++G KMSKS  NF TI E L+ 
Sbjct: 395 AFPHHDNELAQSEAYWHETCAH--DHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDK 452

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             +  RS     +R+  L++ +++ I+ T
Sbjct: 453 GDWTPRS-----LRIVFLLSAWKDGIEIT 476



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V ++ NITD+DDKII R RQ H
Sbjct: 85  KFDVEFIMNITDVDDKIITRGRQHH 109


>gi|295395900|ref|ZP_06806085.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971173|gb|EFG47063.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 391

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 188/391 (48%), Gaps = 39/391 (9%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           ++YVCG T YD  H+G+A   + FDVL+RL  +      VTYV+NITD+DD ++ERA+  
Sbjct: 20  KLYVCGITPYDATHLGHASTYVAFDVLHRL--WIDAGYSVTYVQNITDVDDPLLERAQAT 77

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                       +  +    F  D   L  + PTH   A   +  +   +  ++  G AY
Sbjct: 78  GVDW------QELAREQIDLFRSDMEALRVIPPTHYIGAVEAMDIVARSVVELLDKGFAY 131

Query: 147 EANNEIIF---DTSSIPNYGSFSRRKID------EQKMGTRVPEKYHKKNPADFILWKRS 197
             +N  ++   D+S  P +GS S    D       ++ G   P+   K+NP D +LW+  
Sbjct: 132 SLDNGDVYFKIDSSYKPPFGSVSHYDADTMAKLFAERGGD--PDVAGKENPLDPLLWRAK 189

Query: 198 TPMEPGWESPWG--RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
              EP W+ P G   GRPGWHIEC+A++  Y G    + GGG DL FPHHE   A +  A
Sbjct: 190 REGEPSWD-PDGLPAGRPGWHIECTAIAQEYAGLPLHVQGGGNDLAFPHHEMGAAHA-AA 247

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                 A  ++H G +  EG KMSKS GN + +++L E      +      IRL +L  H
Sbjct: 248 WLDTPLAQSYMHTGMVGYEGEKMSKSLGNLVLVSQLRE------QGVDPMAIRLTILDHH 301

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTS------TSKGIIDPAVLSALYNDLNTVSAIQALH 369
           YR    +    L +A   L +W + +       SK ++   +   L +DL+T +A+  + 
Sbjct: 302 YRSDWMYDDGALAKATERLEQWRRAAQCGSHYVSKDVV-RELRECLADDLDTPTALSLID 360

Query: 370 KLAR---ESTKNHDLLPIFNASAHILGIEVC 397
             A    ++T   +   +  A   +LGI++ 
Sbjct: 361 DWAAARDQNTSESESEAVVKAVDALLGIQLA 391


>gi|225557189|gb|EEH05476.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 806

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 145/269 (53%), Gaps = 26/269 (9%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  SI   +T K   +F++D   L  L P    R T ++P
Sbjct: 212 DVQDVLLEYLDSIHGSSIRGEDRSIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 271

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD ++    G S++R         K+  +  G    
Sbjct: 272 EIVSFVERIVKHKFGYVTSDGSVYFDITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 331

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 332 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 391

Query: 241 IFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHH+NE+AQS       CA       N ++H G L+++G KMSKS  NF TI E L+ 
Sbjct: 392 AFPHHDNELAQSEAYWHETCAHG--HWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDK 449

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             +  RS     +R+  L++ +++ I+ T
Sbjct: 450 GDWTPRS-----LRIVFLLSAWKDGIEIT 473



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 54/85 (63%), Gaps = 6/85 (7%)

Query: 5   IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V ++ NITD+DDK+    RQ H
Sbjct: 85  KFDVEFIMNITDVDDKV---GRQHH 106


>gi|327354912|gb|EGE83769.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 844

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 26/269 (9%)

Query: 74  DIDDKIIERARQEH-PSIPINDAI--SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H  SI   D +  + +  K   +F++D   L  L P    R T ++P
Sbjct: 250 DVKDVLLEYLDSVHGSSIRGEDRLIFTKLAKKYETRFMQDVRDLNVLDPDAITRVTEYMP 309

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVP 180
           +++  ++ II H   Y  ++  + FD ++    G S++R         K+  +  G    
Sbjct: 310 EIVSFVERIIDHKFGYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEGALTK 369

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 370 KTTEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 429

Query: 241 IFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHH+NE+AQS       CAD      N ++H G L+++G KMSKS  NF TI E L+ 
Sbjct: 430 AFPHHDNELAQSEAYWHETCADH--HWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDK 487

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             +  RS     +R+  L+  +++ I+ T
Sbjct: 488 GDWTPRS-----LRIVFLLGGWKDGIEIT 511



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 61  LKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDYF- 119

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V ++ NITD+DDKII R RQ+H
Sbjct: 120 KFDVKFIMNITDVDDKIISRGRQQH 144


>gi|121712962|ref|XP_001274092.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119402245|gb|EAW12666.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 808

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/313 (33%), Positives = 159/313 (50%), Gaps = 29/313 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTS 157
           +T K   +F+KD   L  L P    R T +  ++   ++ I+ +   Y  ++  + FD +
Sbjct: 247 LTKKYEDRFLKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVANKFGYVTDDGSVYFDIN 306

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G         S S  K+  +  G    +   K++ +DF LWK S P EP W S W
Sbjct: 307 AFEAAGHPYARLEPWSRSDNKLLAEGEGALTKKTTEKRSASDFALWKASKPGEPSWTSSW 366

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-----DRIEKTAN 263
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS           ++  N
Sbjct: 367 GRGRPGWHIECSAMASARLGKEMDIHSGGVDLAFPHHDNELAQSEAYWSHDHSHTDQWVN 426

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +R+ ++ T
Sbjct: 427 YFLHMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWRDGVEIT 481

Query: 324 VQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
            + ++      + W +   +    I DPA L A  +  +T   + A  +  R++   H L
Sbjct: 482 EELVSAG----NSWEEKVNNFFIKIRDPATLQAQTSGTDTT--LPAALEAGRKAVHEH-L 534

Query: 382 LPIFNASAHILGI 394
              FN    +  I
Sbjct: 535 CDSFNTQGAMFAI 547



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 26  LKIWNSLTRSKTPFVPIDPEAKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
              V ++ NITD+DDKII RARQ+H
Sbjct: 85  HFDVKFIMNITDVDDKIILRARQQH 109


>gi|302911731|ref|XP_003050554.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731491|gb|EEU44841.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 800

 Score =  168 bits (426), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/239 (38%), Positives = 130/239 (54%), Gaps = 20/239 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T      F++D   L  L P    R T ++PQ+   ++ I+  G AYEA   + FD S+
Sbjct: 212 LTQSMEDLFMEDMDALNVLRPDVITRVTEYVPQIAKFVERIVDKGFAYEAEGSVYFDISA 271

Query: 159 IPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R        + + E+  G+       KK+P DF LWK+S   EP W SPWG
Sbjct: 272 FEKAGNTYARLRPDNRNDKSLQEEGEGSLSKNLGGKKSPGDFALWKKSKAGEPYWPSPWG 331

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEKT-ANI 264
            GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS    C   + E T  N 
Sbjct: 332 NGRPGWHIECSVMASDVLGAQMDIHSGGIDLAFPHHDNELAQSEAYFCEHGKGEHTWVNY 391

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           ++H G L++ G KMSKS  NF TI + L T      ++    +R+  LM  + + ++ +
Sbjct: 392 FLHMGHLSISGSKMSKSLKNFQTIQDALAT------NYSPRGMRIVFLMGRWNDGVEIS 444



 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 75/132 (56%), Gaps = 13/132 (9%)

Query: 3   KKIKIYNTLERKI-TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +K+YN+L       F  I+   +  Y CGPTVYD +H+G+AR  +  D++ R+L++Y+
Sbjct: 2   ESLKLYNSLNPGAPVPFVPIEKGKVAWYACGPTVYDKSHLGHARNYVSTDIIRRILQHYF 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V +V NITDIDDKII +AR++           ++  +  + + KD  R   LA   
Sbjct: 62  GFE-VNFVMNITDIDDKIIIKARRQR----------LLELEKNKTYSKDELRELALA-AF 109

Query: 122 QPRATNHIPQMI 133
           +  A + +P ++
Sbjct: 110 RAYAKSSLPLLL 121


>gi|224011277|ref|XP_002295413.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583444|gb|ACI64130.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 322

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/321 (35%), Positives = 161/321 (50%), Gaps = 57/321 (17%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRL-LRYYYGEKC-----VTYVRNITDIDDKIIER 82
           Y+CGPTVYD AH+G+ R  ++ D+L R+ +  + G          YV N+TD+DDKII+R
Sbjct: 2   YICGPTVYDSAHLGHGRTYVLLDILRRVAINLHKGSASHLTPPPLYVMNVTDVDDKIIQR 61

Query: 83  ----ARQEHPSIPINDAISIITSKNTQ-QFVKDTTRLACLAPTHQPRATNHIPQMIY-LI 136
               A Q+  +  + +A  +  +++ + +F +D  RL  L P    R + H+   I   I
Sbjct: 62  SMENASQQSTTSTVQEADPLSLARHFEAEFWQDMDRLNVLRPDIVCRVSEHVESTIVPYI 121

Query: 137 QNIILHGHAY---------EANNEIIFD-------TSSIPNYGS----------FSRRKI 170
           + I+  G AY         + N  + FD       TS    YG           FS    
Sbjct: 122 EQILKGGMAYVIPEGDDNTQQNGSVYFDVRAFESLTSGRTKYGKLAPDVASSDFFSLEAA 181

Query: 171 DEQK---MGTRVPEKYHKKNPADFILWK--------RSTPMEPG---WESPWGRGRPGWH 216
           D  +    G  V     K++P DF LWK        +ST +EP    ++SPWG GRPGWH
Sbjct: 182 DADENNSEGQHVSLIRKKRDPRDFCLWKYRSRTQNNKSTVIEPASVSFKSPWGFGRPGWH 241

Query: 217 IECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           +ECSAM             F +H GG+DL FPHH NEIAQ+      ++    W+H G L
Sbjct: 242 VECSAMIQRLAEDFSYTHQFQLHAGGIDLKFPHHSNEIAQAEAYGDWKEWIPHWVHTGHL 301

Query: 272 NLEGRKMSKSNGNFITINELL 292
            ++GRKMSKS  NF+TI E+L
Sbjct: 302 YVKGRKMSKSLKNFVTIREML 322


>gi|260903707|ref|ZP_05912029.1| cysteinyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 419

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 117/388 (30%), Positives = 183/388 (47%), Gaps = 44/388 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++T  R     +  D +   +YVCG T YD  H+G+A   + FD+L R+ R    +  V
Sbjct: 21  VFDTGTRSPRRLKGRDQA-AGLYVCGITPYDATHLGHAATYVAFDLLNRVWRDAGLD--V 77

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISI----ITSKNTQQFVKDTTRLACLAPTHQ 122
            YV+N TD+DD ++ERA          DA  +    +     + F +D + L  L P   
Sbjct: 78  VYVQNTTDVDDPLLERA----------DATGVDWRELAESQIELFREDMSALRVLPPQSY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSR------RKIDEQ 173
                 + Q++  +++++    AY  +N  ++    T   P +GS S        K+  +
Sbjct: 128 IGVVESVDQIVKAVEDLVDSRAAYTLDNGDVYYRVSTPINPPFGSVSHDDRATMAKLSAE 187

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFD 232
           + G   PE   K N  D +LWK +   EP W+    G GRPGWHIEC+ ++  Y G   D
Sbjct: 188 RGGD--PETPGKDNEIDPLLWKAAREGEPSWDGGKLGPGRPGWHIECTVIADKYAGLPVD 245

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL+FPHHE   A +  A +    A  ++H G +  +G KMSKS GN + +++L 
Sbjct: 246 VQGGGSDLVFPHHEMSAAHA-AAWKQTPLARTYMHTGMVGYQGEKMSKSKGNLVLVSKLR 304

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------K 344
           E      +     VIR  +L  HYR   +FT   L  A   L  W   +          +
Sbjct: 305 E------QGVDPMVIRTVLLSNHYRSDWNFTEDLLETASARLKAWRHAAMCEAECREGLR 358

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLA 372
           G I   +  +L +DL++  A+  L + A
Sbjct: 359 GHIIGLLRESLADDLDSPRALGILDEWA 386


>gi|255716136|ref|XP_002554349.1| KLTH0F03168p [Lachancea thermotolerans]
 gi|238935732|emb|CAR23912.1| KLTH0F03168p [Lachancea thermotolerans]
          Length = 773

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/242 (38%), Positives = 133/242 (54%), Gaps = 20/242 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN------EIIFDTSS 158
           ++F KD   L  L P+   R + ++P+++  ++ II +G+AY   +       + FD S 
Sbjct: 247 REFNKDMAALNVLEPSVTTRVSEYVPEIVDFVKRIIDNGYAYATGDGSVYFDTVAFDKSE 306

Query: 159 IPNYGS---FSRRKID----EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
             +Y     +++ K+D     +   +       K++  DF LWK S P EP W+SPWG+G
Sbjct: 307 KHDYAKCQPWNKGKLDLINDAEGSLSNFSSTNGKRSSNDFALWKSSKPGEPEWDSPWGKG 366

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+   LG   DIH GG+DL FPHH+NEIAQS       +  N ++H G L
Sbjct: 367 RPGWHIECSVMACDVLGPNIDIHTGGIDLAFPHHDNEIAQSEAFYDNHQWVNYFLHTGHL 426

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           ++EG+KMSKS  NFITI E L  KK+  R      +RLA     +   +DF    L E +
Sbjct: 427 HIEGQKMSKSLKNFITIGEAL--KKYSARQ-----LRLAFSSAQWNSQLDFKEVLLVEVK 479

Query: 332 IL 333
            L
Sbjct: 480 SL 481



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 60/85 (70%), Gaps = 2/85 (2%)

Query: 4   KIKIYNTLERKITEFQAID-PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++K+YN+L R+  +F  I    N+  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G
Sbjct: 45  RLKLYNSLTRQKEDFVTISGDKNVTWYSCGPTVYDSSHMGHARNYVSIDINRRILQDYFG 104

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
            + + +V+N+TD+DDKII RARQ H
Sbjct: 105 YR-IRFVQNVTDVDDKIILRARQSH 128


>gi|163840786|ref|YP_001625191.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|310947209|sp|A9WSI9|MSHC_RENSM RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|162954262|gb|ABY23777.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 423

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/385 (29%), Positives = 183/385 (47%), Gaps = 46/385 (11%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           ++  +YVCG T YD  H+G+A   + FD+L R+ R       V YV+N+TDIDD ++ERA
Sbjct: 36  ADASLYVCGITPYDATHMGHAATYLAFDLLGRVWRD--SGASVNYVQNVTDIDDPLLERA 93

Query: 84  RQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
            +        D +    +     + F  D T L  +AP     A   I  ++  ++ +I 
Sbjct: 94  DR--------DGVDWRELAESQIELFRADMTALNVIAPQQYIGAIEAIQWIVPAVEELIA 145

Query: 142 HGHAYEANN-EIIFDT--SSIPNYGSFSRRKIDEQKMGT-----------------RVPE 181
            G AY  ++ ++ FDT  +S+    S +  ++    +G                    PE
Sbjct: 146 EGFAYRMDSGDVYFDTVAASVKTPDSSNAGELGAWWLGQISGLSPEEMLPVFAERGGDPE 205

Query: 182 KYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  K+NP D +LW+     EP W  +  G GRPGWHIEC+ ++  +L   F + GGG DL
Sbjct: 206 RDGKRNPLDPLLWRVERAGEPAWPGASLGDGRPGWHIECTVIARKFLPAPFSVQGGGSDL 265

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHE     +   D     A  + H G + L+G KMSKS GN + ++ L         
Sbjct: 266 LFPHHEMGDGHAWALDHT-PLAKHYAHAGMVGLDGEKMSKSRGNLVLVSALRAEGV---- 320

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----SAL 355
                 +RL++L  HYR    +T + L  +++ L++W        +   A L     +AL
Sbjct: 321 --DPMAVRLSILANHYRSDWSWTAELLERSKLRLAQWRAAMEHTSVGSAAQLVSEIRTAL 378

Query: 356 YNDLNTVSAIQALHK-LARESTKNH 379
             DL+  +A+ A+   + +++T  H
Sbjct: 379 AADLDAPTALNAVDNWVGQKATTEH 403


>gi|154285550|ref|XP_001543570.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
 gi|150407211|gb|EDN02752.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
          Length = 665

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 145/269 (53%), Gaps = 26/269 (9%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  +I   +T K   +F++D   L  L P    R T ++P
Sbjct: 188 DVQDVLLEYLDSIHGSSIRGEDRTIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 247

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD  +    G S++R         K+  +  G    
Sbjct: 248 EIVSFVERIVKHRFGYVTSDGSVYFDIGAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 307

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 308 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 367

Query: 241 IFPHHENEIAQS------CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            FPHH+NE+AQS       CA   +   N ++H G L+++G KMSKS  NF TI E L+ 
Sbjct: 368 AFPHHDNELAQSEAYWHETCAH--DHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDK 425

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
             +  RS     +R+  L++ +++ I+ T
Sbjct: 426 GDWTPRS-----LRIVFLLSAWKDGIEIT 449



 Score = 76.6 bits (187), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 3/81 (3%)

Query: 5   IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 26  LKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERA 83
           +  V ++ NITD+DDKI+  A
Sbjct: 85  KFDVEFIMNITDVDDKIVRSA 105


>gi|303319833|ref|XP_003069916.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240109602|gb|EER27771.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 839

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 25/242 (10%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTS 157
           ++ +   +F++D   L  L      R T  IP+++  ++ I+ HG AY  A+  + FD +
Sbjct: 277 LSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYFDIA 336

Query: 158 SIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G+   R          +     G  + +   K++ ADF LWK S   EP W SPW
Sbjct: 337 AFEAAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWKASKAGEPSWPSPW 396

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS-------CCADRIEKT 261
           G GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS       C  D+    
Sbjct: 397 GLGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW--- 453

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L+++G KMSKS  NF TI E LE   +  RS     +R+  LM ++ + I+
Sbjct: 454 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGDWTPRS-----LRIVFLMGNWADGIE 508

Query: 322 FT 323
            T
Sbjct: 509 IT 510



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 15/150 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L R    F  +DP+   +  Y CGPTVYD AH+G+AR  +  D+L RLLR Y+ 
Sbjct: 60  LKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRDYF- 118

Query: 63  EKCVTYVRNITDIDDKIIERARQEH------PSIP-INDAISIITSKNTQQFVKDTTRLA 115
           +  V ++ NITD+DDKII RARQ+H       S P I+D++    +   + +V+    L 
Sbjct: 119 KFDVKFIMNITDVDDKIITRARQQHLFMEYVTSHPTIDDSVVETITSAYESYVRKNLPLL 178

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              PT  P+A    P+ + +    +L+G A
Sbjct: 179 EHVPT--PKA---FPEAVEIKYGFVLNGGA 203


>gi|71014778|ref|XP_758760.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
 gi|46098550|gb|EAK83783.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
          Length = 824

 Score =  168 bits (425), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/248 (38%), Positives = 130/248 (52%), Gaps = 31/248 (12%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-----EANNEIIFDTSSIP 160
           ++  D  RL    PT   R + ++P+++  +Q II  G AY     +    + FDT +  
Sbjct: 276 EYFNDMKRLHVEPPTTLTRVSEYVPEIVTFVQQIIDRGFAYAEGVDQNKKNVWFDTRAFD 335

Query: 161 NY----GSF------------SRRKIDEQKMG---TRVPEKYHKKNPADFILWKRSTPME 201
                 GSF              R++ E+  G   T       K+  +DF LWK S P E
Sbjct: 336 GAKSQDGSFQHSYAKLQPWSKGNRELLEEGEGSLSTSTAATAGKRAASDFALWKSSKPGE 395

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           P W SPWG GRPGWHIECS M S  LG+  DIH GG+DL+FPHH+NEIAQS       + 
Sbjct: 396 PAWPSPWGPGRPGWHIECSVMGSAVLGETMDIHSGGVDLMFPHHDNEIAQSEAHHGCRQW 455

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L++EG KMSKS  NFI+I+E LE  +F  R      +R++ L+  +   +D
Sbjct: 456 VNYFLHTGHLHIEGLKMSKSLKNFISIDEALE--RFTARQ-----LRMSFLLQPWHGRMD 508

Query: 322 FTVQRLTE 329
           F    L E
Sbjct: 509 FKQSALGE 516



 Score = 77.0 bits (188), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YN+L R  T F       +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y G 
Sbjct: 39  ELKMYNSLTRTKTPFVPKKGRTVTWYNCGPTVYDASHMGHARNYVTQDIIRRILRDYLGY 98

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V NITD+DDKII +AR  +
Sbjct: 99  D-VHFVMNITDVDDKIIIKARHSY 121


>gi|119183429|ref|XP_001242754.1| hypothetical protein CIMG_06650 [Coccidioides immitis RS]
          Length = 809

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 131/242 (54%), Gaps = 25/242 (10%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTS 157
           ++ +   +F++D   L  L      R T  IP+++  ++ I+ HG AY  A+  + FD +
Sbjct: 247 LSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYFDIA 306

Query: 158 SIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G+   R          +     G  + +   K++ ADF LWK S   EP W SPW
Sbjct: 307 AFEAAGNQYARLEPWNRNDTALQADGEGALINKAVEKRSKADFALWKASKAGEPSWPSPW 366

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS-------CCADRIEKT 261
           G GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS       C  D+    
Sbjct: 367 GPGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW--- 423

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L+++G KMSKS  NF TI E LE   +  RS     +R+  LM ++ + I+
Sbjct: 424 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGDWTPRS-----LRIVFLMGNWADGIE 478

Query: 322 FT 323
            T
Sbjct: 479 IT 480



 Score = 52.4 bits (124), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 9/79 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L R    F  +DP+   +  Y CGPTVYD AH+G+AR  I+     + L     
Sbjct: 60  LKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYIITRARQQHL----- 114

Query: 63  EKCVTYVRNITDIDDKIIE 81
              + YV +   IDD ++E
Sbjct: 115 --FMEYVTSHPTIDDSVVE 131


>gi|293363664|ref|ZP_06610414.1| putative cysteinyl-tRNA synthetase [Mycoplasma alligatoris A21JP2]
 gi|292552771|gb|EFF41531.1| putative cysteinyl-tRNA synthetase [Mycoplasma alligatoris A21JP2]
          Length = 403

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/338 (34%), Positives = 167/338 (49%), Gaps = 26/338 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           YVCGPTVY   HIGN RP+   D+  +  R         +V NITDIDDKII +A +   
Sbjct: 1   YVCGPTVYSDLHIGNIRPITTIDLFLKANRNL--NIPFIFVHNITDIDDKIINKAIELKV 58

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-E 147
                D + I ++K  +Q+ +    L     TH      ++  +   IQ ++ +  AY +
Sbjct: 59  -----DELEI-STKYAKQYKELLNALKIDTITHLVYVRKNMDLITDYIQELLNNKSAYFD 112

Query: 148 ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
            N  ++FD     N YG  S++KID+        +K H   P+DF LWK +T +   + S
Sbjct: 113 LNKNVLFDVKKYENNYGIVSKQKIDKMIFENENVQKNH---PSDFALWK-NTNIGVKFNS 168

Query: 207 PWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
            +G GRPGWH ECSA+   Y  G+  DIH GG+DL FPHHENE  Q       + T   W
Sbjct: 169 SFGPGRPGWHTECSALIKKYFNGESLDIHSGGIDLKFPHHENENIQHFALYNRQITKK-W 227

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G +N  G+KMSKS GN +   + LE        +   V R+  L++    P++   +
Sbjct: 228 LHCGHINFAGQKMSKSLGNVVLAKDFLE-------QYGPNVFRMIQLLSDITSPMNLDEE 280

Query: 326 RLTEAEILLSKWPQTSTSKGIID---PAVLSALYNDLN 360
            +  A+   SK  Q S    + D     +   LY +LN
Sbjct: 281 FIKNAQKAFSKIKQLSFKLFLQDNLSNEINQELYKELN 318


>gi|21104458|dbj|BAB93499.1| OK/SW-CL.10 [Homo sapiens]
          Length = 453

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 138/260 (53%), Gaps = 21/260 (8%)

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R T +
Sbjct: 2   VMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTEN 55

Query: 129 IPQMIYLIQNIILH-GHAYEANNEIIFDTSSIPN--YGSFSRRKIDEQKMGTRVPEKYHK 185
           IPQ+I  I+ II      +    + +  + S+    YG   RR        + +    H 
Sbjct: 56  IPQIISFIEGIIASWERLFNGKRQCLLRSESLEETKYGKIGRRGPWSSPETSGLLTSRHA 115

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
               DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL FPHH
Sbjct: 116 N---DFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHH 172

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWP 303
           ENEIAQ     + E+  N ++H+G L+ +G+  KMSKS  N+ITI + L+T       + 
Sbjct: 173 ENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKT-------FS 225

Query: 304 APVIRLAMLMTHYREPIDFT 323
             V R   L + YR  ID++
Sbjct: 226 PDVFRFFCLRSSYRSAIDYS 245


>gi|302309006|ref|NP_986187.2| AFR640Wp [Ashbya gossypii ATCC 10895]
 gi|299790899|gb|AAS54011.2| AFR640Wp [Ashbya gossypii ATCC 10895]
          Length = 750

 Score =  167 bits (424), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 131/238 (55%), Gaps = 16/238 (6%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
           D    + +     F  D  RL    P+   R + ++ +++  I+ I+ +G+AY  ++  +
Sbjct: 225 DVFRALAAHWENSFNADMERLGVRPPSVTTRVSEYVDEIVKFIERIVANGYAYATSDGSV 284

Query: 153 IFDT-------SSIPNYGSFSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPGW 204
            FDT        + P    ++R   D    G   +     K+NP DF LWK S   EP W
Sbjct: 285 YFDTVQFEAGGHAYPKCQPWNRGVADLIADGEGALATGTEKQNPNDFALWKASKAGEPEW 344

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQ+      ++  N 
Sbjct: 345 PSPWGLGRPGWHIECSVMASDVLGERVDIHSGGIDLAFPHHDNELAQAEACFNSQQWVNY 404

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           ++H G L++EG+KMSKS  NFITI+E L  K +  R      +RLA  M+ +  P+DF
Sbjct: 405 FLHTGHLHIEGQKMSKSLKNFITIDEAL--KMYSARQ-----LRLAFAMSPWGSPLDF 455



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 57/84 (67%), Gaps = 2/84 (2%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF  +    N+  Y CGPTVYD +H+G+AR  +  D+  RL+  Y+G 
Sbjct: 36  LKLYNSLTRTKDEFIPLSQGRNVTWYSCGPTVYDASHMGHARNYVSIDINRRLIEDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V+N+TDIDDKII RARQEH
Sbjct: 96  H-VEFVQNVTDIDDKIILRARQEH 118


>gi|320034216|gb|EFW16161.1| cysteinyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 805

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 96/255 (37%), Positives = 136/255 (53%), Gaps = 27/255 (10%)

Query: 88  PSIPIND--AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           PSI   D    + ++ +   +F++D   L  L      R T  IP+++  ++ I+ HG A
Sbjct: 230 PSIRGEDYSIFTQLSQRFEDRFMEDARVLNILDADEVTRVTEFIPEIVSFVEQIVQHGFA 289

Query: 146 YE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWK 195
           Y  A+  + FD ++    G+   R          +     G  + +   K++ ADF LWK
Sbjct: 290 YATADGSVYFDIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWK 349

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS--- 252
            S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS   
Sbjct: 350 ASKAGEPSWPSPWGLGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAY 409

Query: 253 ----CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
               C  D+     N ++H G L+++G KMSKS  NF TI E LE   +  RS     +R
Sbjct: 410 WHKGCSHDQW---VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGDWTPRS-----LR 461

Query: 309 LAMLMTHYREPIDFT 323
           +  LM ++ + I+ T
Sbjct: 462 IVFLMGNWADGIEIT 476



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 86/150 (57%), Gaps = 15/150 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L R    F  +DP+   +  Y CGPTVYD AH+G+AR  +  D+L RLLR Y+ 
Sbjct: 26  LKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH------PSIP-INDAISIITSKNTQQFVKDTTRLA 115
           +  V ++ NITD+DDKII RARQ+H       S P I+D++    +   + +V+    L 
Sbjct: 85  KFDVKFIMNITDVDDKIITRARQQHLFMEYVTSHPTIDDSVVETITSAYESYVRKNLPLL 144

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              PT  P+A    P+ + +    +L+G A
Sbjct: 145 EHVPT--PKA---FPEAVEIKYGFVLNGGA 169


>gi|307178002|gb|EFN66863.1| Cysteinyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 738

 Score =  167 bits (423), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 126/231 (54%), Gaps = 20/231 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS------- 158
           +F KD   L  L P    R + +IP++I  +Q +I +G AYE+N  + FD          
Sbjct: 212 EFHKDMDALNVLRPNVLTRVSEYIPEIIAFVQKVIDNGFAYESNGSVYFDVGKFDKQEKH 271

Query: 159 -----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                +P  YG  S  +  E  +         K++  DF LWK S   EP W+SPWG+GR
Sbjct: 272 SYAKLVPEAYGDTSSLQEGEGDLSVTEDRLSEKRSVTDFALWKSSKTGEPWWDSPWGKGR 331

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S   G+  DIH GG+DL FPHH+NEIAQ+            ++H+G L 
Sbjct: 332 PGWHIECSVMASAICGESLDIHTGGVDLKFPHHDNEIAQAEAYFDNSNWVKYFLHSGHLT 391

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           + G KMSKS  NF+TI + L  KK+  R      +RLA L+  +++ +D++
Sbjct: 392 IAGCKMSKSLKNFVTIQDAL--KKYSSRQ-----LRLAFLLHSWKDTLDYS 435



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LRLYNSLTREKEVFVPQFGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILSDYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V YV NITDIDDKII+RARQ +
Sbjct: 80  -VLYVMNITDIDDKIIKRARQNY 101


>gi|261328614|emb|CBH11592.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 785

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 46/312 (14%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------- 159
           F +D  RL    P    R T ++PQ++  IQ I+ +G AY     + FDT++        
Sbjct: 245 FFEDMKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFAYSGETSVFFDTTAFIRAGHNY 304

Query: 160 PNYGSFSRR--------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
           P     S R        ++ E +          K++P DF LWK S P EP W SPWG G
Sbjct: 305 PKLKPISERDECNTTEAEMAEGEGALAACVAGEKRSPNDFALWKFSKPGEPHWPSPWGAG 364

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   DIH GG DL FPHH+NE AQS       +  N ++H G L
Sbjct: 365 RPGWHIECSVMASDILGTNMDIHSGGCDLKFPHHDNECAQSEAYSMQHQWVNYFLHCGHL 424

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           +++G KMSKS  NFITI   L+      R+     +RL  L   + + ++F+ Q + EA+
Sbjct: 425 HIKGLKMSKSLKNFITIRHALDDLGVTPRT-----MRLLFLANQWNKAMNFSDQSIDEAK 479

Query: 332 ----ILLSKWP------QTSTSKGI----------------IDPAVLSALYNDLNTVSAI 365
               +L S +       ++ T K I                 + AV +AL N+ +T +A+
Sbjct: 480 ERERVLRSFFGSVDMVLRSDTLKEIQGFNEHDRKLNEAWISTESAVDAALRNNFDTPTAM 539

Query: 366 QALHKLARESTK 377
           +A+  L  E+ +
Sbjct: 540 EAIMGLVSETNR 551



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N++   + +F   +   +R Y CGPTVYD +H+G+AR  + FD+L R++  ++G K
Sbjct: 38  VCVLNSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFDILRRIMEDFFGYK 97

Query: 65  CVTYVRNITDIDDKIIERAR 84
            V Y  NITDIDDKII+RAR
Sbjct: 98  -VIYQMNITDIDDKIIKRAR 116


>gi|72389845|ref|XP_845217.1| cysteinyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359925|gb|AAX80350.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801752|gb|AAZ11658.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 785

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/312 (34%), Positives = 154/312 (49%), Gaps = 46/312 (14%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------- 159
           F +D  RL    P    R T ++PQ++  IQ I+ +G AY     + FDT++        
Sbjct: 245 FFEDMKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFAYSGETSVFFDTTAFIRAGHNY 304

Query: 160 PNYGSFSRR--------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
           P     S R        ++ E +          K++P DF LWK S P EP W SPWG G
Sbjct: 305 PKLKPISERDECNTTEAEMAEGEGALAACVAGEKRSPNDFALWKFSKPGEPHWPSPWGAG 364

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   DIH GG DL FPHH+NE AQS       +  N ++H G L
Sbjct: 365 RPGWHIECSVMASDILGTNMDIHSGGCDLKFPHHDNECAQSEAYSMQHQWVNYFLHCGHL 424

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           +++G KMSKS  NFITI   L+      R+     +RL  L   + + ++F+ Q + EA+
Sbjct: 425 HIKGLKMSKSLKNFITIRHALDDLGVTPRT-----MRLLFLANQWNKAMNFSDQSIDEAK 479

Query: 332 ----ILLSKWP------QTSTSKGI----------------IDPAVLSALYNDLNTVSAI 365
               +L S +       ++ T K I                 + AV +AL N+ +T +A+
Sbjct: 480 ERERVLRSFFGSVDMVLRSDTLKEIQGFNEHDRKLNEAWISTESAVDAALRNNFDTPTAM 539

Query: 366 QALHKLARESTK 377
           +A+  L  E+ +
Sbjct: 540 EAIMGLVSETNR 551



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 36/80 (45%), Positives = 54/80 (67%), Gaps = 1/80 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + N++   + +F   +   +R Y CGPTVYD +H+G+AR  + FD+L R++  ++G K
Sbjct: 38  VCVLNSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFDILRRIMEDFFGYK 97

Query: 65  CVTYVRNITDIDDKIIERAR 84
            V Y  NITDIDDKII+RAR
Sbjct: 98  -VIYQMNITDIDDKIIKRAR 116


>gi|50291223|ref|XP_448044.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527355|emb|CAG60995.1| unnamed protein product [Candida glabrata]
          Length = 788

 Score =  167 bits (422), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 131/230 (56%), Gaps = 19/230 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII------FDTSS 158
           +Q+  D   L  + P    R + ++P+++  +++II +G+AY  N+  +      FD + 
Sbjct: 251 KQYDSDMAALNVIPPNVTTRVSEYVPEIVSFVEDIINNGYAYATNDGSVYFDTVRFDQNE 310

Query: 159 IPNYGS---FSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGR 212
             +Y     +++ K+D    G      +    KK+  DF LWK S P EP W+SPWG+GR
Sbjct: 311 KHDYAKCQPWNKGKLDLINDGEGSLSNFDNNGKKSANDFALWKGSKPGEPAWDSPWGKGR 370

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L+
Sbjct: 371 PGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEAKFDNKQWINYFLHTGHLH 430

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +EG+KMSKS  NFITI E L+  K+  R      +RLA     +   +DF
Sbjct: 431 IEGQKMSKSLKNFITIQEALQ--KYTPRQ-----LRLAFASVPWNNQLDF 473



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 12/110 (10%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R    F  +     +  Y CGPTVYD +H+G+AR  +  D+  RL++ Y+G 
Sbjct: 39  LKLYNSLTRSKEVFAPSSGTKTVSWYSCGPTVYDASHMGHARNYVSIDINRRLIQNYFGY 98

Query: 64  KCVTYVRNITDIDDKIIERAR----------QEHPSIPINDAISIITSKN 103
             + +V+N+TDIDDKII RAR          Q     P+N++  I+   N
Sbjct: 99  D-IQFVQNVTDIDDKIIIRARHNYLFEEFVKQNDSETPLNESDEIVKKAN 147


>gi|255728717|ref|XP_002549284.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240133600|gb|EER33156.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 786

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 90/231 (38%), Positives = 129/231 (55%), Gaps = 24/231 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIP--- 160
           +++ +D  RL  L P+   R + ++P +I  +  II +G+AY   +  + FDT       
Sbjct: 257 KRYNEDMARLNVLPPSITTRVSEYVPDIIEFVDKIIENGYAYATEDGSVYFDTVKYEHSK 316

Query: 161 ---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                    + G  S     E  + T       K++ ADF LWK S P EP W+S WG+G
Sbjct: 317 HEYAKLQPWSKGDLSLINDGEGSLSTGNT----KRSSADFALWKASKPGEPSWDSKWGKG 372

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L
Sbjct: 373 RPGWHIECSVMASDIGGETLDIHSGGIDLCFPHHDNELAQSEAYFDNKQWINYFMHNGHL 432

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +++G+KMSKS  NFITI+E L  K F  R      +RL   +  + +P+DF
Sbjct: 433 HIQGQKMSKSLKNFITIDEAL--KDFSARQ-----LRLVFALNPWEKPLDF 476



 Score = 85.9 bits (211), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/86 (46%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +K+YN+L R   EF  I P  I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 47  KPTLKLYNSLTRSKNEFHPIKPGQITWYSCGPTVYDHSHMGHARNYVSTDISRRILQDYF 106

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + +++N+TDIDDKII  ARQ++
Sbjct: 107 GYH-INFIQNVTDIDDKIIIAARQQY 131


>gi|315124323|ref|YP_004066327.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018045|gb|ADT66138.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 240

 Score =  167 bits (422), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 128/223 (57%), Gaps = 13/223 (5%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L    G + V + RN TDIDDKI+
Sbjct: 14  LDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL-LAQGNR-VKFARNYTDIDDKIL 71

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           ++  Q   ++        IT    + + +D   L  L P  +PRAT++I  M+ LI+ + 
Sbjct: 72  KKMAQSGQTL------EEITEFYIKSYEEDMRVLNVLDPDFKPRATHYITAMLDLIKKLA 125

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
             G  Y   + I FDTS    Y S S R ++E    +R+  +  K+N +DF+LWK     
Sbjct: 126 KDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQKRNESDFVLWKFD--- 180

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           E  +ES +G+GRPGWH EC AM         DIH GG+DL+FP
Sbjct: 181 ENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFP 223


>gi|170584986|ref|XP_001897270.1| cysteinyl tRNA synthetase protein 1, isoform b [Brugia malayi]
 gi|158595316|gb|EDP33879.1| cysteinyl tRNA synthetase protein 1, isoform b, putative [Brugia
           malayi]
          Length = 768

 Score =  166 bits (421), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/248 (37%), Positives = 130/248 (52%), Gaps = 23/248 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +  K   +F+ D   L  L PT   R + +IP++I  ++ II +G+ Y   +  + FDT 
Sbjct: 223 LAKKYENEFLCDMASLNVLPPTVLTRVSEYIPEIIAYVEKIINNGYGYVTKDGSVYFDTV 282

Query: 158 SIPNYGSFSRRKI------DEQKMGTRVPEKY---------HKKNPADFILWKRSTPMEP 202
              N    S  K+      D +++   + E           +K+N  DF LWK S   EP
Sbjct: 283 KFDNSEKHSYCKLVPEAFADNEQLMKNMRESEGDLSMGNLENKRNVTDFALWKASKDGEP 342

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPWG+GRPGWHIECSAMSS   G   DIH GG DL FPHH+NEIAQ      IE   
Sbjct: 343 YWNSPWGKGRPGWHIECSAMSSKICGTSLDIHAGGFDLKFPHHDNEIAQVEAYYDIENWV 402

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N ++H G L + G KMSKS  NFITI E L       + + A  +R+  LM ++ + +D+
Sbjct: 403 NYFLHCGSLRIAGLKMSKSLKNFITIREAL-------KHYSARQLRILFLMHNWNDVLDY 455

Query: 323 TVQRLTEA 330
           +   +  A
Sbjct: 456 SAASMERA 463



 Score = 92.0 bits (227), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 41/79 (51%), Positives = 58/79 (73%), Gaps = 1/79 (1%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+  RK   F  ++P  ++ Y+CGPTVYD +HIG+AR  + FD+L R+L+ Y+G   +
Sbjct: 37  LYNSFTRKKELFVPLNPKQVKWYICGPTVYDSSHIGHARAYLSFDILRRVLQDYFGYD-I 95

Query: 67  TYVRNITDIDDKIIERARQ 85
            Y+ NITDIDDKII+RARQ
Sbjct: 96  QYIMNITDIDDKIIKRARQ 114


>gi|259482994|tpe|CBF77996.1| TPA: cysteinyl-tRNA synthetase (AFU_orthologue; AFUA_5G09610)
           [Aspergillus nidulans FGSC A4]
          Length = 833

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 17/237 (7%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T K  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  A+  + FD +
Sbjct: 277 LTRKYEERFMKDMDDLNVLRPDELTRVTEYGQEIADFVEKIVENKFGYVSADGSVYFDIN 336

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G         S S  K+  +  G+   +   K++ +DF LWK S P EP W S W
Sbjct: 337 AFEAAGFPYARLEPWSRSDNKLLAEGEGSLANKTTEKRSKSDFALWKSSKPGEPSWSSSW 396

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWI 266
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS        ++  N ++
Sbjct: 397 GRGRPGWHIECSAMASARLGKHMDIHSGGIDLAFPHHDNELAQSEAYWHSHGDQWVNYFL 456

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +++ I+ T
Sbjct: 457 HMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWKDGIEIT 508



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+YN+L +  T F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 57  LKVYNSLTKSKTPFIPIDPHGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 115

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V +V NITD+DDKII RARQ+H
Sbjct: 116 KFNVHFVMNITDVDDKIILRARQQH 140


>gi|67903626|ref|XP_682069.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
 gi|40741403|gb|EAA60593.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
          Length = 838

 Score =  166 bits (420), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 133/237 (56%), Gaps = 17/237 (7%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T K  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  A+  + FD +
Sbjct: 282 LTRKYEERFMKDMDDLNVLRPDELTRVTEYGQEIADFVEKIVENKFGYVSADGSVYFDIN 341

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G         S S  K+  +  G+   +   K++ +DF LWK S P EP W S W
Sbjct: 342 AFEAAGFPYARLEPWSRSDNKLLAEGEGSLANKTTEKRSKSDFALWKSSKPGEPSWSSSW 401

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWI 266
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS        ++  N ++
Sbjct: 402 GRGRPGWHIECSAMASARLGKHMDIHSGGIDLAFPHHDNELAQSEAYWHSHGDQWVNYFL 461

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +++ I+ T
Sbjct: 462 HMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWKDGIEIT 513



 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 8/90 (8%)

Query: 5   IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+YN+L +  T F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 57  LKVYNSLTKSKTPFIPIDPHGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 115

Query: 63  EKCVTYVRNITDIDDK-----IIERARQEH 87
           +  V +V NITD+DDK     II RARQ+H
Sbjct: 116 KFNVHFVMNITDVDDKVNGVQIILRARQQH 145


>gi|149057587|gb|EDM08830.1| rCG43187, isoform CRA_d [Rattus norvegicus]
          Length = 241

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 88/201 (43%), Positives = 119/201 (59%), Gaps = 12/201 (5%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           +ITD+DDKII+RA +      +N + + + S   ++F +D   L  L PT   R T +IP
Sbjct: 4   SITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTVYLRVTENIP 57

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           Q+I  IQ II HGHAY  A   + FD  +  + YG    + ++     T  P    K++ 
Sbjct: 58  QIISFIQGIIAHGHAYATATGSVYFDLRARGDKYG----KLVNTVPSATAEPVDSDKRHS 113

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
           +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+DL FPHHENE
Sbjct: 114 SDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAFPHHENE 173

Query: 249 IAQSCCADRIEKTANIWIHNG 269
           IAQS    + ++  N ++H+G
Sbjct: 174 IAQSEVFHQCQQWGNYFLHSG 194


>gi|296817003|ref|XP_002848838.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839291|gb|EEQ28953.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 804

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/244 (38%), Positives = 134/244 (54%), Gaps = 23/244 (9%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
            +++T +   +F++D   L  L P    R T  +P+++  ++ II H   Y   +  + F
Sbjct: 240 FTLLTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYF 299

Query: 155 DTSSIPNYG-SFSRRK--------IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           D  S    G S++R +        +  +  G    ++  KK+ ADF LWK S   EP W 
Sbjct: 300 DIESFEAAGNSYARLEPWNRNDANLQSEGEGALSNKQAEKKSAADFALWKASKAGEPSWP 359

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS------CCADRIE 259
           SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NEIAQS       C+    
Sbjct: 360 SPWGNGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSPTCSHV-- 417

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
           +  N +IH G L+++G KMSKS  NF TI + L+   +  RS     +R+  L+  +R+ 
Sbjct: 418 QWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDALQRGDWTPRS-----LRIVFLLGGWRDG 472

Query: 320 IDFT 323
           I+ T
Sbjct: 473 IEIT 476



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+ 
Sbjct: 26  LKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V Y+ NITD+DDKII R RQ+H
Sbjct: 85  KFDVNYIMNITDVDDKIITRGRQQH 109


>gi|168008202|ref|XP_001756796.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692034|gb|EDQ78393.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 811

 Score =  166 bits (419), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/239 (38%), Positives = 131/239 (54%), Gaps = 16/239 (6%)

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI 159
           T K   +F  D T L C  P    R T ++ ++I  ++ ++ +  AY AN  + FDT + 
Sbjct: 222 TLKYENEFWDDMTALGCGYPDVLVRVTEYMDKIIEYVEVVLANKFAYVANGSVYFDTKAF 281

Query: 160 PNYGSFSRRKIDEQKMGTRVP--------EKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
              G     K++   +G+ +         E   K+   DF LWK+S P EP WESPWG G
Sbjct: 282 REAG-HQYGKLNPAAVGSSLLASESESNFETSEKRTSCDFALWKKSKPGEPAWESPWGLG 340

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+S  LG   DIH GG DL FPHH+NE+AQS       +    + H+G L
Sbjct: 341 RPGWHIECSAMASDILGDNMDIHSGGHDLQFPHHDNELAQSEAYFHCHEWVRYFFHSGHL 400

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +++G KMSKS  NFITI E L TK      + A  +R+  ++  + + I+F+   + EA
Sbjct: 401 SIDGLKMSKSLKNFITIKEAL-TK------YTARQLRMLFVIQSWDKSINFSTTVVNEA 452



 Score = 80.1 bits (196), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 71/122 (58%), Gaps = 9/122 (7%)

Query: 2   KKKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           K+ + + N+L ++   F   D S N+  Y+CGPTVYD +H+G+AR  + FD++ R+L  Y
Sbjct: 13  KRGLMVNNSLCKEKVPFFTKDGSRNVTWYICGPTVYDSSHVGHARNYVTFDIIRRILEDY 72

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEH-------PSIPINDAISIITSKNTQQFVKDTTR 113
           +    V YV N+TD+DDKII RAR+ +        +I +N  I  +     ++ VK   +
Sbjct: 73  F-HYNVKYVMNVTDVDDKIINRARRNYLMDQYRSGAIDLNKVIEDLERAMEEELVKQQKK 131

Query: 114 LA 115
           ++
Sbjct: 132 IS 133


>gi|328849314|gb|EGF98497.1| hypothetical protein MELLADRAFT_46041 [Melampsora larici-populina
           98AG31]
          Length = 791

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 132/249 (53%), Gaps = 24/249 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           + +K    F +D   L    PT   R +++IPQ+   I  I+ +G+AYE+N  I FD  +
Sbjct: 237 LATKWEHSFFEDMKSLNVEPPTVLTRVSDYIPQIESFISQIMENGYAYESNGSIYFDVLA 296

Query: 159 IPN------------YGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
             +            Y   S       K+ ++  G        K++ ADF LWKRS   E
Sbjct: 297 FDHSTLRSDPSLHHTYAKLSPSSKTNLKLIKEGEGGLSSLMDSKRSTADFALWKRSKAGE 356

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           P WES WG+GRPGWHIECS M+S  LG   DIH GG+DL+FPHH+NE+AQS       + 
Sbjct: 357 PEWESRWGKGRPGWHIECSVMASEVLGNGMDIHSGGVDLMFPHHDNELAQSEAYHDCHQW 416

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L++EG KMSKS  NFITI + L  K+   R      +R++ +   +   +D
Sbjct: 417 VNYFLHTGHLHIEGLKMSKSLKNFITIQDAL--KRHSARQ-----LRISFIGQRWDLGMD 469

Query: 322 FTVQRLTEA 330
           F    ++E 
Sbjct: 470 FAESSMSEV 478



 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 3  KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
          K +K+YN+L +  T+F    P  I  Y CGPTVYD +H+G+AR  +  D+L R+ R Y+ 
Sbjct: 13 KGLKLYNSLTKSKTDFIPRIPGKISWYNCGPTVYDASHMGHARNYVAQDILRRITRDYFK 72

Query: 63 EKCVTYVRNITDIDDKIIERARQE 86
           + + +V NITDIDDKII+RAR+E
Sbjct: 73 YE-INFVMNITDIDDKIIKRAREE 95


>gi|315049511|ref|XP_003174130.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342097|gb|EFR01300.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 804

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 162/326 (49%), Gaps = 55/326 (16%)

Query: 89  SIPIND--AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           SIP +D    + +T +   +F+KD   L  L P    R T  +P+++  ++ II H   Y
Sbjct: 231 SIPGSDHSIFTRLTREYEDRFMKDVRDLNVLDPDEITRVTEFMPEIVSFVERIIDHKFGY 290

Query: 147 -EANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKR 196
              +  + FD  S    G+   R          +  +  G+   ++  KK+ ADF LWK 
Sbjct: 291 VTPDGSVYFDIESFEAAGNNYARLEPWNRNDANLQSEGEGSLSNKQAEKKSSADFALWKA 350

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS---- 252
           S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NEIAQS    
Sbjct: 351 SKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYW 410

Query: 253 --CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
              C+    +  N +IH G L+++G KMSKS  NF TI + L+   +  RS     +R+ 
Sbjct: 411 SPTCSHV--QWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDALQRGDWTPRS-----LRIV 463

Query: 311 MLMTHYREPIDFTVQ-----------------RLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            L+  +R+ I+ T +                 R+ +  + L   P+T+  + +  PA L 
Sbjct: 464 FLLGGWRDGIEITEEIVKAGNAWEEKVNNFFIRVKDPSVKL---PETTQDEEL--PAALK 518

Query: 354 A--------LYNDLNTVSAIQALHKL 371
           A        L +  NT  A+ A+ +L
Sbjct: 519 AAQDNVHKHLCDSFNTAGAMYAISEL 544



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 41/85 (48%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+ 
Sbjct: 26  LKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  + Y+ NITD+DDKII R RQ+H
Sbjct: 85  KFDINYIMNITDVDDKIITRGRQQH 109


>gi|159037918|ref|YP_001537171.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|310947215|sp|A8M264|MSHC_SALAI RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|157916753|gb|ABV98180.1| Cysteine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 412

 Score =  165 bits (417), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/320 (31%), Positives = 158/320 (49%), Gaps = 26/320 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A  MI FD++ R+ R    +  VTYV+N+TDIDD ++ERA ++ 
Sbjct: 40  MYVCGITPYDATHLGHAATMITFDLVQRVWRDAGLD--VTYVQNVTDIDDPLLERAARD- 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 +   ++  + T  F +D   L  + P H   A   IP +   +  ++    AY 
Sbjct: 97  -----GEDWKVLAMRETALFREDMVALRIIPPAHYVGAVESIPDIAERVLTLVKEEAAYR 151

Query: 147 --EANNEIIFDTSSIPNYG---SFSRR---KIDEQKMGTRVPEKYHKKNPADFILWKRST 198
             +   ++ FD S+ P +G   +  R    KI  ++ G   P++  K++P D +LW+ + 
Sbjct: 152 IDDGTGDVYFDISAAPRFGYESNLGREQMLKIFPERGGD--PDRAGKRDPLDPLLWRSAR 209

Query: 199 PMEPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
             EP W           WHIEC+ ++ + LG   D+ GGG DLIFPHHE   A +     
Sbjct: 210 ADEPSWPGGGLGPGRPGWHIECAVIALNLLGHRIDVQGGGNDLIFPHHECSAAHAELLTG 269

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
               A  ++H G + L G KMSKS GN + ++ L   +           +RLA++  HYR
Sbjct: 270 QSPFAQHYVHAGMIGLAGEKMSKSRGNLVFVSRLRADRV------DPMAVRLALMSGHYR 323

Query: 318 EPIDFTVQRLTEAEILLSKW 337
               +    L  A+  L +W
Sbjct: 324 SDRSWNDDLLVTAQKRLDRW 343


>gi|302848858|ref|XP_002955960.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
           nagariensis]
 gi|300258686|gb|EFJ42920.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
           nagariensis]
          Length = 650

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/202 (41%), Positives = 118/202 (58%), Gaps = 7/202 (3%)

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI 159
            +K  ++F++D   L C  P    R + ++P+++  +Q I+ +G AY +N  + FDT + 
Sbjct: 221 AAKYEREFLEDMDALGCRRPDVLTRVSEYMPEIVNYVQRILDNGMAYVSNGSVYFDTQNF 280

Query: 160 P----NYGSFSRRKIDEQKM---GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
                 YG  +   +    +   G    E   K++  DF LWK S P EP W+SPW +GR
Sbjct: 281 RACGHTYGKLNPWAVGSAALAAEGESNFETSEKRSLQDFALWKASKPGEPVWDSPWSQGR 340

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECSAM+S  +G   D+H GG DL FPHH+NE+AQ+      E   N ++H G L+
Sbjct: 341 PGWHIECSAMASTIIGSRLDLHSGGEDLRFPHHDNELAQAEAYYHTEWWVNYFLHCGHLH 400

Query: 273 LEGRKMSKSNGNFITINELLET 294
           +EG KMSKS  NFITI E L+T
Sbjct: 401 IEGLKMSKSLKNFITIREALQT 422



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 54/86 (62%), Gaps = 4/86 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRM---YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +YN+   +   F  +   N R    Y CGPTVYD AH+G+AR  + FD++ R+L  Y+
Sbjct: 24  LMLYNSFVDEKVPFVPVAGPNSRQITWYACGPTVYDVAHMGHARNYLSFDIVRRVLEDYF 83

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G  C+  V N+TD+DDKII RAR+ +
Sbjct: 84  GYNCLM-VMNVTDVDDKIILRARRNY 108


>gi|324509893|gb|ADY44145.1| Cysteinyl-tRNA synthetase [Ascaris suum]
          Length = 574

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 133/248 (53%), Gaps = 23/248 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +  K   +F +D ++L  L P    R + ++P++I  +Q II +G+ Y   +  + FDT 
Sbjct: 315 LAKKYENEFHEDMSKLNVLPPDVLTRVSEYVPEVIAYVQKIIDNGYGYTTKDGSVYFDTI 374

Query: 158 SIPNYGSFSRRKI------DEQKMGTRVPEKY---------HKKNPADFILWKRSTPMEP 202
           +  +  + S  K+      D +++   + E            K+NP DF LWK S   EP
Sbjct: 375 AFESKPNHSYAKLVPEAFGDNEQLLKNMRESEGELSMGNLEEKRNPTDFALWKSSKSGEP 434

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W+SPWG+GRPGWHIECSAMSS   G   DIH GG DL FPHH+NEIAQ       +   
Sbjct: 435 FWDSPWGKGRPGWHIECSAMSSQICGSKLDIHSGGFDLKFPHHDNEIAQVEAHYDYDNWV 494

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N ++H G L + G KMSKS  NFITI + L       + + A  +R+  LM ++ + +D+
Sbjct: 495 NYFLHCGTLRIAGMKMSKSLKNFITIRDAL-------KQYTARQLRILFLMHNWTDVLDY 547

Query: 323 TVQRLTEA 330
           +   +  A
Sbjct: 548 SASSMERA 555



 Score = 91.3 bits (225), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 41/84 (48%), Positives = 59/84 (70%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K  ++N+  RK   F  +    ++ Y+CGPTVYD +H+G+AR  + FD+L R++++Y+G 
Sbjct: 126 KFHLFNSFTRKKELFVPLSGKRVKWYICGPTVYDSSHMGHARAYLSFDILRRVMQHYFGY 185

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V YV NITDIDDKII+RARQ H
Sbjct: 186 D-VHYVMNITDIDDKIIKRARQNH 208


>gi|257068786|ref|YP_003155041.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|310947175|sp|C7MCZ4|MSHC_BRAFD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256559604|gb|ACU85451.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 416

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 187/393 (47%), Gaps = 40/393 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T   +IT    + P   R+YVCG T YD  H+G+A      D++ R LR      
Sbjct: 19  LRLHDTRTGRITPVVPLTPGTARLYVCGITPYDSTHLGHAATYHAADLMRRALRD--SGL 76

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISI--ITSKNTQQFVKDTTRLACLAPTHQ 122
            V   +N+TD+DD ++ERA +        D +    + +  +  F +D   L  +AP   
Sbjct: 77  AVEMAQNVTDVDDPLLERADR--------DGVDWRELAASQSALFAEDMEALRVIAPETY 128

Query: 123 PRATNHIPQMIYLIQNIILHGHAY------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
              +  + ++I ++  +   G AY       A  +   D ++    G  S    +EQ + 
Sbjct: 129 RSVSEAMDEIIAVVLALHARGRAYPVEAADAAGPDWYLDLAADGALGDVSGWS-EEQMLA 187

Query: 177 TRV-----PEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKV 230
                   P++  K+   D +LW      EP W++   GRGRPGWH+EC  ++   +G  
Sbjct: 188 VFAERGGDPDREGKRGRFDPLLWSAEREGEPAWDAGVLGRGRPGWHVECVCIAEEGIGLP 247

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+  GG DLIFPHH+   A S    R    A  + H+G +  +G KMSKS GN + ++ 
Sbjct: 248 FDVQAGGSDLIFPHHDLSAAHSVALGR--PFAAAYAHSGMVGYQGEKMSKSLGNLVFVHR 305

Query: 291 LLETKKFGGRSWPAP-VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           L+       R    P VIRL ++  HYR   ++T   L  A   L  + + +  +G   P
Sbjct: 306 LV-------REGTDPMVIRLVLMAHHYRSDWEWTDGELDRAAERLKSY-RLAARRGDHRP 357

Query: 350 AVL----SALYNDLNTVSAIQALHKLARESTKN 378
           A +    +AL +DL+TV A++AL   A   + +
Sbjct: 358 ATVEALRAALRDDLDTVRALEALDAWAEGGSSS 390


>gi|260825281|ref|XP_002607595.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
 gi|229292943|gb|EEN63605.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
          Length = 636

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/223 (39%), Positives = 121/223 (54%), Gaps = 26/223 (11%)

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT------ 177
           R + +IP++I  +Q II  G+ YE+N  + FDT+      S    K+  +  G       
Sbjct: 146 RVSEYIPEVIEYVQTIIDKGYGYESNKSVYFDTTKFDGADSHFYAKLVPEAFGDSKAMLE 205

Query: 178 ----------RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
                     R+ EK   ++  DF LWK S P EP W+SPWG GRPGWHIECS M+S  L
Sbjct: 206 GEGDLSISQDRLSEK---RSTTDFALWKASKPGEPSWDSPWGMGRPGWHIECSVMASSIL 262

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHH+NEIAQ+      +     ++H+G L +EG KMSKS  NFIT
Sbjct: 263 GGSLDIHTGGYDLKFPHHDNEIAQAEAYYDNDHWVRYFLHSGHLTIEGCKMSKSLKNFIT 322

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           I E L   K+  R      +RL  L+  +++ +D++   +  A
Sbjct: 323 IQEAL--SKYSSRQ-----LRLGFLLHSWKDTLDYSSDTMGTA 358



 Score = 50.8 bits (120), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 34/47 (72%), Gaps = 1/47 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          +G+AR  I FD+L R+++ Y+    V Y  NITDIDDKII+RARQ +
Sbjct: 1  MGHARSYISFDILRRVMKDYFNYD-VLYAMNITDIDDKIIKRARQNY 46


>gi|254584650|ref|XP_002497893.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
 gi|186703720|emb|CAQ43411.1| Cysteinyl-tRNA synthetase [Zygosaccharomyces rouxii]
 gi|238940786|emb|CAR28960.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
          Length = 746

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 131/240 (54%), Gaps = 26/240 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIP--- 160
           +++  D   L  LAP    R + ++P+++  ++ I+ +G+ Y   +  + FDT+      
Sbjct: 233 EKYDDDMRLLNVLAPDVTTRVSEYVPEIVEFVKRIVDNGYGYATEDGSVYFDTTKFDRDE 292

Query: 161 ----------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
                     N G     ++  +  G+ V     K++ +DF LWK S   EP WESPWG 
Sbjct: 293 KHAYAKNQPWNKGDL---ELVSEGEGSLVGSTSGKRSSSDFALWKASKDGEPRWESPWGE 349

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNG 269
           GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS  C D  +   N ++H G
Sbjct: 350 GRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNEMAQSEACFDNYQ-WVNYFLHTG 408

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L++EG+KMSKS  NFIT+ E L       + + +  +RLA  +T +   +DF    + E
Sbjct: 409 HLHIEGQKMSKSLKNFITVQESL-------KMYSSRQLRLAFCLTQWNNQMDFKESLMQE 461



 Score = 79.3 bits (194), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 2/87 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           K+ +K+YN+L R    F  I    ++  Y CGPTVYD AH+G+AR  +  D+  RLL+ Y
Sbjct: 32  KRVLKLYNSLTRNKEVFVPISGGKSVSWYSCGPTVYDAAHMGHARNYVSIDINRRLLQDY 91

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEH 87
           +G   V +V+N+TDIDDKII R RQ +
Sbjct: 92  FGYD-VKFVQNVTDIDDKIILRGRQNY 117


>gi|213513600|ref|NP_001133392.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209153132|gb|ACI33145.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 541

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 20/227 (8%)

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKID 171
           L P    R + + P+++  ++ I+ +G  YE+N  + FDT+         YG      + 
Sbjct: 28  LPPDVLTRVSEYCPEIVDFVKKILDNGFGYESNGSVYFDTAKFDTSQKHAYGKLVPEAVG 87

Query: 172 EQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
           + K        +     +   K++  DF LWK S P EP W+SPWG+GRPGWHIECSAM+
Sbjct: 88  DMKALQEGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGWHIECSAMA 147

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              LG+  DIHGGG DL FPHH+NE+AQS      +     ++H G L + G KMSKS  
Sbjct: 148 GSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAGCKMSKSLK 207

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           NFITI + L           A  +RLA LM  +++ +D++   +  A
Sbjct: 208 NFITIKDALAKNT-------ARQLRLAFLMHSWKDTLDYSSNTMESA 247


>gi|15828648|ref|NP_326008.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Mycoplasma
           pulmonis UAB CTIP]
 gi|61216356|sp|Q98R33|SYC_MYCPU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|14089590|emb|CAC13350.1| CYSTEINYL-TRNA SYNTHETASE (CYSTEINE--TRNA LIGASE) [Mycoplasma
           pulmonis]
          Length = 596

 Score =  164 bits (415), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 203/430 (47%), Gaps = 54/430 (12%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
            ++Y+CGPTVYD  HIGN R ++V D++ R  + Y G+K + +V NITDIDDKIIER+ Q
Sbjct: 207 FKVYLCGPTVYDEVHIGNMRSVVVVDLIVRAQK-YLGKKTL-FVHNITDIDDKIIERSIQ 264

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              S       + I+ K  +++ K   +    +    P+ T++I  ++  I ++   G+ 
Sbjct: 265 SKIS------ENKISEKYFREYKKVLKKYRIKSIDKMPKVTDNIDSIVKFINSLDKKGYV 318

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
            + ++  +FD S I NYG    R+               KK   +F LWK ST     + 
Sbjct: 319 IQKDDGFVFDVSKIKNYGKRLSRE--------------DKKQVENFYLWK-STTKGVQYN 363

Query: 206 SPWGRGRPGWHIECSA-MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
                GRPGWH EC+  +   +  +  DIH GG+DL FPHHENE AQ    + ++ T + 
Sbjct: 364 YNGFLGRPGWHSECTLFIDDIFNSQTLDIHAGGIDLTFPHHENENAQYIAKNDVKITKH- 422

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+H G +  + +KMSKS GN I             + +   + ++ ++ +    PI  T 
Sbjct: 423 WLHVGQVMFKNQKMSKSLGNVIL-----------AKDFDEDIFKIILINSSVTAPIYITN 471

Query: 325 QRLTEAEILLSKWPQ-------TSTSKGIIDPA---VLSALYNDLNTVSAIQALHKLARE 374
           + +  A+++++K+ +        S S    D     V      D ++ +     +  A  
Sbjct: 472 ELIENAKVIINKYKKLYFKFLNLSLSFNFDDNVRYMVRKIADKDFSSFNLKLNEYIKAYN 531

Query: 375 STKNHDLLPIFNASAHILG---IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
           ++   D L I ++  H L    IE  ++   KN     +K+       LK K +  AD  
Sbjct: 532 TSLEADKLTIVSSVIHFLNFSFIEQIEKDFRKN-----KKIYDIWQGFLKQKNYEKADMF 586

Query: 432 RKQLESKGFI 441
           RK L  +G I
Sbjct: 587 RKILIDQGLI 596


>gi|321453850|gb|EFX65049.1| hypothetical protein DAPPUDRAFT_265305 [Daphnia pulex]
          Length = 676

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 85/239 (35%), Positives = 124/239 (51%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN--- 161
           ++F KD   L  L      R + ++P+++  I  I+  G AY AN  + FD +   +   
Sbjct: 206 EEFYKDMAALNVLPADVITRVSQYVPEIVDYIAKIMERGFAYSANGSVYFDVAKFDSQKN 265

Query: 162 ----------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                     YG     +  E  +         KK+P DF LWK S   EP W+SPWG+G
Sbjct: 266 HKYAKLVPEAYGDSKALQEGEGDLSVSEDRLSEKKSPNDFALWKNSKSGEPSWDSPWGKG 325

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   D H GG+DL FPHH+NE+AQS      ++  + ++H G L
Sbjct: 326 RPGWHIECSVMASAILGSSMDFHTGGVDLKFPHHDNELAQSEAYYDNDEWVSYFLHTGHL 385

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            ++G KMSKS  NFITI + L           +  +R+  L+  ++E +D++   + EA
Sbjct: 386 TIQGCKMSKSLKNFITIQDALSRN-------SSRELRIFFLLHQWKETLDYSHSAMEEA 437



 Score = 96.3 bits (238), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 1/84 (1%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          K+ IYN+L RK   F   + +NI  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 13 KLMIYNSLTRKKEVFTPQNGNNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRDYFGY 72

Query: 64 KCVTYVRNITDIDDKIIERARQEH 87
            +TYV NITDIDDKII+RARQ +
Sbjct: 73 D-ITYVMNITDIDDKIIKRARQNY 95


>gi|255949146|ref|XP_002565340.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592357|emb|CAP98704.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 800

 Score =  164 bits (414), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 153/313 (48%), Gaps = 32/313 (10%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +T +  ++F KD   L  L PT   R T +  ++   +  I+ +   Y   +  + FD +
Sbjct: 245 LTKRYEERFTKDMRDLNVLDPTELTRVTEYGDEIAAFVDRIVKNNFGYATKDGSVYFDIN 304

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G         S S  K+  +  G+   +   K+  +DF LWK S P EP W S W
Sbjct: 305 AFEAAGHPYARLEPWSRSDNKLAAEGEGSLASKTTEKRGASDFALWKSSKPGEPSWSSAW 364

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC----ADRIEKTANI 264
           G+GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+AQS        + E+  N 
Sbjct: 365 GKGRPGWHIECSAMASARLGNQMDIHSGGIDLAFPHHDNELAQSEAYWHGDHKHEQWVNY 424

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G L+++G KMSKS  NF TI E L+ K +  RS     +R+  L+  +++ ++ T 
Sbjct: 425 FLHMGHLSIQGSKMSKSLKNFTTIREALDRKDWSPRS-----LRIVFLLGGWKDGVEITD 479

Query: 325 QRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-L 381
             +       S W +   +    + DPA L +   D    + ++   K        HD L
Sbjct: 480 DLVNTG----SSWEEKVNNFFLKVKDPAALQSSGTDTTFAADLETAKKAV------HDQL 529

Query: 382 LPIFNASAHILGI 394
              FN  A +  I
Sbjct: 530 CDSFNTPAVMASI 542



 Score = 84.7 bits (208), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 8/116 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRM--YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L +  T F  ID +  ++  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 23  LKVWNSLTKSKTPFVPIDSAGKKVVWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 81

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V +V NITD+DDKII RARQ+H       A   ITS+     V DT + A +A
Sbjct: 82  KFDVNFVMNITDVDDKIILRARQQHLFNEFITANPTITSE-----VLDTVKSAFVA 132


>gi|321478384|gb|EFX89341.1| hypothetical protein DAPPUDRAFT_303176 [Daphnia pulex]
          Length = 730

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 124/239 (51%), Gaps = 20/239 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN--- 161
           ++F KD   L  L      R + ++P+++  I  II  G AY AN  + F+ S   +   
Sbjct: 202 EEFYKDMAALNVLPADVITRVSEYVPEIVDYISRIIERGLAYSANGSVYFNVSKFDSQKN 261

Query: 162 ----------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                     YG     +  E  +         KK+P DF LWK S   EP W+SPWG+G
Sbjct: 262 HKYAKLVPEAYGDSKALQEGEGDLSVSEDRLSEKKSPNDFALWKTSKSGEPSWDSPWGKG 321

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++    ++H G L
Sbjct: 322 RPGWHIECSVMASAILGSSMDIHTGGVDLKFPHHDNELAQSEAYYDNDEWVRYFLHTGHL 381

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            ++G KMSKS  NFITI + L           +  +R+  L+  ++E +D++   + EA
Sbjct: 382 TIQGCKMSKSLKNFITIQDALSRN-------SSRELRIFFLLHPWKETLDYSDSAMDEA 433



 Score = 96.7 bits (239), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 1/84 (1%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          ++KIYN+L RK   F   +  NI  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 12 ELKIYNSLTRKKEVFTPQNGKNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRDYFGY 71

Query: 64 KCVTYVRNITDIDDKIIERARQEH 87
            +TYV NITDIDDKII+RARQ +
Sbjct: 72 D-ITYVMNITDIDDKIIKRARQNY 94


>gi|310799373|gb|EFQ34266.1| tRNA synthetase class I catalytic domain-containing protein
           [Glomerella graminicola M1.001]
          Length = 804

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 134/256 (52%), Gaps = 24/256 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    ++F  D   L CL P    R T ++PQ+   +  I+  G AYE++  + FD ++
Sbjct: 210 LTQSMEREFFDDMDALNCLRPDVITRVTEYVPQIAEFVARIVDKGFAYESDGSVYFDITA 269

Query: 159 IPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R        + + E   G        K+N  DF LWK+S   EP W+S WG
Sbjct: 270 FEKAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRNEGDFALWKKSKKGEPYWDSRWG 329

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC----ADRIEKT-ANI 264
           +GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS        + E T  N 
Sbjct: 330 QGRPGWHIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAYYVDNSKGEHTWVNN 389

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G L++ G KMSKS  NF TI + L T      ++ +  +R+  LM  + + ++ + 
Sbjct: 390 FLHMGHLSISGSKMSKSLKNFQTIQDALAT------TYTSRGMRIVFLMGKWNDGVEISP 443

Query: 325 QRLTEAEILLSKWPQT 340
               +A    S W  T
Sbjct: 444 DMRAQA----SSWEAT 455



 Score = 75.9 bits (185), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 58/85 (68%), Gaps = 2/85 (2%)

Query: 3  KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          + +K++N+L+  +   F  I P  +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+
Sbjct: 2  ESLKLHNSLKPGQPVPFTPIKPGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYF 61

Query: 62 GEKCVTYVRNITDIDDKIIERARQE 86
          G   V +V NITD+DDKII +AR++
Sbjct: 62 GAD-VKFVMNITDVDDKIIIKARRQ 85


>gi|149912421|ref|ZP_01900960.1| cysteinyl-tRNA synthetase [Moritella sp. PE36]
 gi|149804500|gb|EDM64593.1| cysteinyl-tRNA synthetase [Moritella sp. PE36]
          Length = 276

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 151/291 (51%), Gaps = 45/291 (15%)

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           P EP W SPWG GRPGWHIECSAM++  LG+VFDIHGGG DL+FPHHENE+AQSCCA   
Sbjct: 2   PGEPRWVSPWGEGRPGWHIECSAMNNKILGEVFDIHGGGSDLMFPHHENEVAQSCCAHNG 61

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E   N W+H+G + ++  KMSKS  NF TI ++LE  K+ G S     +R  ++  HYR 
Sbjct: 62  EYV-NTWMHSGMVQIDKVKMSKSLNNFFTIRDVLE--KYDGES-----VRYFLISGHYRS 113

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGI----IDPAV----------LSALYNDLNTVSA 364
            ++++   L +A   L +    +  +G+    ID  V           +A+ +D NT  A
Sbjct: 114 QLNYSEDNLKQARASLERL--YTALRGVTVAEIDGVVPDCEAYVETFKAAMDDDFNTPEA 171

Query: 365 IQALHKLARE--------STKNHDLLPIFNASAHILGI------EVCKEHLNKNISIA-I 409
              L +LA+E          +  +L         +LG+         +     +  +A I
Sbjct: 172 FPVLFELAKEINRIKETDEKRAGELAAQLITFGEVLGLLSQDPEAFLQGDTGADDEVAEI 231

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           E L+++R      K +  AD  R +L + G +LED      G   T W++K
Sbjct: 232 EALIKQRNDARVSKDWGMADDARDKLNALGIVLED------GANGTSWRRK 276


>gi|316970881|gb|EFV54739.1| cysteinyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 786

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/248 (36%), Positives = 124/248 (50%), Gaps = 37/248 (14%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
           Q F  D   L  L P    R + +IP+++  +  ++  G AYE    + FDT +      
Sbjct: 214 QDFDLDMAALNVLPPDVVTRVSEYIPEVVAFVDGLVKRGFAYEVQGSVYFDTVT------ 267

Query: 165 FSRRKIDEQKMGTRVPEKYH----------------------KKNPADFILWKRSTPMEP 202
           F R   D  + G  +PE                         K+   DF LWK S P EP
Sbjct: 268 FGR--TDGHRYGRLLPEAVQDTSLLVEGEGELSLGDENQARQKRFSGDFALWKASKPGEP 325

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPWG GRPGWHIECSAM+S   G+  D+H GG DL FPHH+NE+AQS          
Sbjct: 326 AWPSPWGPGRPGWHIECSAMASAICGEQLDVHAGGFDLKFPHHDNELAQSEAYHGHAPWV 385

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             ++H G L ++G KMSKS  NF+TI + L+        + +  IRL  LM ++ EP+D+
Sbjct: 386 RYFLHAGTLRIQGLKMSKSLKNFVTIKQALQ-------QYTSRQIRLLFLMHNWAEPLDY 438

Query: 323 TVQRLTEA 330
           + Q + +A
Sbjct: 439 SPQTMEKA 446



 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L RK   F     + +  Y+CGPTVYD AH+G+AR  I FD+L R+L++Y+G  
Sbjct: 29  LKLYNSLTRKKEIFIPRHGNQVNWYICGPTVYDAAHMGHARSYISFDILRRVLQHYFGYD 88

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V +V N+TDIDDKII RARQ H
Sbjct: 89  -VLFVMNVTDIDDKIIVRARQRH 110


>gi|322694236|gb|EFY86071.1| cysteinyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 799

 Score =  163 bits (413), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 134/247 (54%), Gaps = 20/247 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T +    F++D   L  L P    R T ++PQ+   ++ I+  G AYEA   + FD ++
Sbjct: 212 LTKRMEAVFLEDMDNLNVLRPDVITRVTEYMPQIAKFVEQIVDKGFAYEAEGSVYFDIAA 271

Query: 159 IPNYG-SFSRRKID--------EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R + D        E+  G+       K+   DF LWK+S   EP W S WG
Sbjct: 272 FQKAGNTYARLRPDSKNDKALQEEGEGSLSTNLGGKRGAGDFALWKKSKAGEPYWPSKWG 331

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEKT-ANI 264
            GRPGWHIECS M+S  LG   D+H GG+DL FPHH+NE+AQS    C   + E T  N 
Sbjct: 332 DGRPGWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNELAQSEAYFCQHGKGEHTWVNY 391

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G L++ G KMSKS  NF TI++ L T      ++ A  +R+  LM  + + ++ + 
Sbjct: 392 FLHMGHLSISGSKMSKSLKNFQTISDALAT------TYTARSMRIVFLMGRWNDGVEISP 445

Query: 325 QRLTEAE 331
              ++A+
Sbjct: 446 DMRSKAD 452



 Score = 74.7 bits (182), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 74/127 (58%), Gaps = 13/127 (10%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K++N+L+      F  ++P  +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+G 
Sbjct: 4   LKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVASDIIRRIMMHYFGF 63

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV N+TD+DDKII +AR++           ++  +  +Q+ +D  R   LA   + 
Sbjct: 64  N-VKYVMNMTDVDDKIIIKARRQR----------LLDLEKKKQYSEDELRNLGLA-AFRA 111

Query: 124 RATNHIP 130
            A+ ++P
Sbjct: 112 YASKNLP 118


>gi|238504958|ref|XP_002383708.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220689822|gb|EED46172.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 874

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 28/295 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTS 157
           +T +  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  ++  + FD  
Sbjct: 313 LTKRYEERFLKDMRDLNVLDPNEITRVTEYGAEIADFVEKIVKNNFGYVTDDGSVYFDIE 372

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G         + S  K+  +  G+   +   K++ +DF LWK S P EP W S W
Sbjct: 373 AFEAAGHPYARLEPWNRSDSKLLAEGEGSLTKKATDKRSASDFALWKASKPGEPSWASSW 432

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC--ADR-----IEKT 261
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS    AD       E+ 
Sbjct: 433 GRGRPGWHIECSAMASARLGKQLDIHSGGVDLAFPHHDNELAQSEAYWADSHNHSHDEQW 492

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N + H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +++ ++
Sbjct: 493 VNYFFHMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWKDGVE 547

Query: 322 FTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYNDLNTVSAIQALHKLARE 374
            T   ++      S W +   +    + DPA L     D    +A+    K   E
Sbjct: 548 ITDDLVSAG----SSWEEKVNNFFIKVKDPAALQGSGTDDTLATALADAQKAVYE 598



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L R    F  ID     +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 94  LKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 152

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V +V NITD+DDKII R RQ+H
Sbjct: 153 KFDVNFVMNITDVDDKIILRGRQQH 177


>gi|317155055|ref|XP_003190552.1| cysteinyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 806

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 28/295 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTS 157
           +T +  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  ++  + FD  
Sbjct: 245 LTKRYEERFLKDMRDLNVLDPNEITRVTEYGAEIADFVEKIVKNNFGYVTDDGSVYFDIE 304

Query: 158 SIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G         + S  K+  +  G+   +   K++ +DF LWK S P EP W S W
Sbjct: 305 AFEAAGHPYARLEPWNRSDSKLLAEGEGSLTKKATDKRSASDFALWKASKPGEPSWASSW 364

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC--AD-----RIEKT 261
           GRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS    AD       E+ 
Sbjct: 365 GRGRPGWHIECSAMASARLGKQLDIHSGGVDLAFPHHDNELAQSEAYWADSHNHSHDEQW 424

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N + H G L+++G KMSKS  NF TI E LE K++  RS     +R+  L+  +++ ++
Sbjct: 425 VNYFFHMGHLSIQGSKMSKSLKNFTTIREALERKEWTPRS-----LRIVFLLGGWKDGVE 479

Query: 322 FTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
            T   ++      S W +   +    + DPA L     D    +A+    K   E
Sbjct: 480 ITDDLVSAG----SSWEEKVNNFFIKVKDPAALQGSGTDDTLATALADGQKAVYE 530



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 56/85 (65%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L R    F  ID     +  Y CGPTVYD AH+G+AR  +  D++ R++R Y+ 
Sbjct: 26  LKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V +V NITD+DDKII R RQ+H
Sbjct: 85  KFDVNFVMNITDVDDKIILRGRQQH 109


>gi|156547291|ref|XP_001606432.1| PREDICTED: similar to cysteinyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 735

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 123/229 (53%), Gaps = 20/229 (8%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS-------- 158
           F KD   L    P    R + ++P+++  I+ II +G AYE+N  + FD  +        
Sbjct: 213 FHKDMDALNVWRPNVLTRVSEYVPEIVAFIEKIIANGLAYESNGSVYFDVKAFDKSEKHY 272

Query: 159 ----IPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
               +P  YG  S  +  E  +         K++  DF LWK S   EP W+SPWG+GRP
Sbjct: 273 YAKLVPEAYGDTSSLQEGEGDLSVSADRLSEKRSVTDFALWKSSKAGEPWWDSPWGKGRP 332

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQ+            ++H+G L +
Sbjct: 333 GWHIECSVMASAICGESLDIHTGGVDLKFPHHDNELAQAEAYFDNSHWVRYFLHSGHLTI 392

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
            G KMSKS  NFITI E L  KK   R      +RLA L+  +++ +D+
Sbjct: 393 SGCKMSKSLKNFITIKEAL--KKHSARQ-----LRLAFLLHSWKDTLDY 434



 Score = 87.8 bits (216), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF     + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+   
Sbjct: 20  LKLYNSLTRQKEEFVPQYRNRVLWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFNFD 79

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V YV NITDIDDKII+RARQ H
Sbjct: 80  -VVYVMNITDIDDKIIKRARQNH 101


>gi|308177410|ref|YP_003916816.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744873|emb|CBT75845.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 420

 Score =  163 bits (412), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 200/420 (47%), Gaps = 46/420 (10%)

Query: 5   IKIYNTLE--RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++NT    +++T       +   MYVCG T YD  H+G+A   + FD++ R  R    
Sbjct: 19  LELFNTATGTQQVTAPADQAAAPASMYVCGITPYDATHMGHAATYVTFDLVQRTWRD--A 76

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y +NITD+DD ++ERA         N     +     Q F  D   L  + P + 
Sbjct: 77  GRSVAYTQNITDVDDPLLERAE------ATNVDWRELAESQIQLFRDDMEALNVIPPQNY 130

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDT----------SSIPNYGSF 165
             A   I  ++ +++ ++    AY           ++ FDT           S+ NY   
Sbjct: 131 IGAVESIHWLVPVVEQLLEADLAYVVPAGADGVEGDVYFDTMGAQNDAWKLGSVSNYDRE 190

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSS 224
           +  +   ++ G   P++  K++  D +LW+ +   EP W+    G GRPGWHIECS ++ 
Sbjct: 191 TMLRFFAERGGD--PQRAGKRDALDPLLWRAAREGEPSWDGGKLGEGRPGWHIECSVIAR 248

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             L   F + GGG DLIFPHHE   A +   D  E  A  ++H G + L+G KMSKS GN
Sbjct: 249 KTLPAPFTVQGGGSDLIFPHHEFSAAHAAAGDHAE-LAQTYVHTGMVGLDGEKMSKSLGN 307

Query: 285 FITINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
            + +++L    +  G     PV IR  +L  HYR    +T + L  A+  ++ W +   S
Sbjct: 308 LVLVSKL----RAAGVE---PVAIRAVLLSQHYRTDWFWTDELLAGAQQRVATWRKALES 360

Query: 344 KGIIDPAVLSA-----LYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEV 396
             + D   + A     + NDL+  SA++A+ + A +  S++      + +    +LG+++
Sbjct: 361 ASMQDAQQVIAGIREHMANDLDAPSALKAIDQWATQPASSQGEGATALRDGINALLGLKL 420


>gi|313678172|ref|YP_004055912.1| cysteine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950555|gb|ADR25150.1| cysteine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 413

 Score =  163 bits (412), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/318 (34%), Positives = 160/318 (50%), Gaps = 23/318 (7%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP++ FD + +  R    E    +V NITD+DDKII +A  
Sbjct: 2   LKIYVCGPTVYNDPHIGNLRPIVTFDFMLKAYRELGKE--FKFVHNITDVDDKIINKA-- 57

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
               I ++   S + S   + + K   +L     +   + T++I  +   I  +   G+A
Sbjct: 58  ----IQLDIKESEVASYYFKSYQKILRKLNVNTISKIEKVTHNISYINKYINRLYESGNA 113

Query: 146 Y-EANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y + N  + FD   +  +YG  S + +D            HKK  ADF LWK ST +   
Sbjct: 114 YKDVNGNVWFDVLKNKDSYGVVSNQNLDNMVFE---ENSLHKKFKADFALWK-STAVGIK 169

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           + S +G GRPGWH EC A+   + G+   DIHGGG+DL FPHHENE  Q         T 
Sbjct: 170 FYSNFGAGRPGWHTECCALIDKHFGQNGVDIHGGGMDLTFPHHENENIQHYALYGKPLTK 229

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G LNL+G KMSKS GN I  N+ +        ++ A +++L          I+ 
Sbjct: 230 E-WIRCGQLNLDGEKMSKSVGNVILANDFI-------NAYGATILKLIFFNAKVSANINI 281

Query: 323 TVQRLTEAEILLSKWPQT 340
           T + +   E +  K+ + 
Sbjct: 282 TKELIENMEAIEIKYKKV 299


>gi|110757574|ref|XP_394641.3| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Apis
           mellifera]
          Length = 729

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/238 (40%), Positives = 129/238 (54%), Gaps = 34/238 (14%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
           Q+F KD   L  L P    R + +IP++I  I+ II +G AYE+N  + FD S+      
Sbjct: 211 QEFHKDMDSLNVLRPNVLTRVSEYIPEIIEFIKKIIENGIAYESNGSVYFDVSTF----- 265

Query: 165 FSRRKIDEQKMGTRVPEKY-------------------HKKNPADFILWKRSTPMEPGWE 205
               K D+      VPE Y                    K++P DF LWK S   EP WE
Sbjct: 266 ---NKQDKHYYAKLVPEAYGDTLSLQEGEGDLSTLEISEKRSPIDFALWKCSKEGEPWWE 322

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NEIAQ+            +
Sbjct: 323 SPWGKGRPGWHIECSVMASIICGESLDIHTGGVDLKFPHHDNEIAQAEAYFNNSNWVRYF 382

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +H+G L + G KMSKS  NFITI + L  KK+  R      +RLA L+  +++ +D++
Sbjct: 383 LHSGHLTISGCKMSKSLKNFITIQDAL--KKYSARQ-----LRLAFLLHSWKDTLDYS 433



 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R    F     ++I  Y CGPTVYD +H+G+AR  + FD++ R+L  Y+G  
Sbjct: 20  LKLYNSLTRNKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYMSFDIIRRVLSDYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            + YV NITDIDDKII+RARQ +
Sbjct: 80  -ILYVMNITDIDDKIIKRARQNY 101


>gi|327292372|ref|XP_003230885.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466921|gb|EGD92374.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 804

 Score =  162 bits (411), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/368 (30%), Positives = 177/368 (48%), Gaps = 63/368 (17%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T +   +F++D   L  L P    R T  +P+++  ++ II H   Y   +  + FD  
Sbjct: 243 LTREYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIE 302

Query: 158 SIPNYGS-------FSRRKIDEQKMG--TRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G+       ++R   + Q  G  +   ++  KK+ ADF LWK S   EP W SPW
Sbjct: 303 NFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSSADFALWKASKAGEPSWPSPW 362

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ------SCCADRIEKTA 262
           G GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NEIAQ      S C+    +  
Sbjct: 363 GNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSSTCSHV--QWV 420

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N +IH G L+++G KMSKS  NF TI + L    +  RS     +R+  L+  +R+ I+ 
Sbjct: 421 NYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGDWTPRS-----LRIVFLLGGWRDGIEI 475

Query: 323 TVQ-----------------RLTEAEILLSKWPQTSTSKGIIDPAVLSA--------LYN 357
           T +                 R+ +  + L   P+T++ + +  PA L A        L +
Sbjct: 476 TDEIVKAGNAWEEKVNNFFIRVKDPSVKL---PETTSDEEL--PAALKAAQHSVHKHLCD 530

Query: 358 DLNTVSAIQALHKL----------ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             NT  A+ A+ +L          A  +   H +     +  +I G+    +  ++NI  
Sbjct: 531 SFNTAGAMYAISELITKFNNTNEAALSAQNTHAVAKWLTSMVNIFGLNSTAKPDSENIGW 590

Query: 408 AIEKLVQE 415
             +++ +E
Sbjct: 591 HGDEIAEE 598



 Score = 89.7 bits (221), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/156 (36%), Positives = 80/156 (51%), Gaps = 19/156 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+ 
Sbjct: 26  LKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQ---------EHPSIPINDAISIITSKNTQQFVKDTTR 113
           +  V Y+ NITD+DDKII R RQ         EHPS  I+  +  I     + ++ D   
Sbjct: 85  KFDVRYIMNITDVDDKIITRGRQQHLYNQFSAEHPS--IDQELLDIAKAAYEAYITDNL- 141

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
              L P   P  TN   +    +   +L G   E N
Sbjct: 142 --PLVPVSTP--TNEFKETAEKVYAAVLDGKPLEGN 173


>gi|219122536|ref|XP_002181599.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406875|gb|EEC46813.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 373

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 115/353 (32%), Positives = 169/353 (47%), Gaps = 50/353 (14%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE----------------KCVTYV 69
           I  Y CGPTVY  AH+G+AR  +  D++ R+L + Y +                    +V
Sbjct: 1   IAFYTCGPTVYAPAHLGHARTYVCLDIVRRVLEHQYAQHRGGSSNSTMPSSPVPPPPLFV 60

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
            N+TD+DDKI+  A     +  ++  +++        F  D  RL  L P    R T H+
Sbjct: 61  MNVTDVDDKILATAAARDETDSLSSPLALARHYEA-AFWSDLDRLNVLRPHVVTRVTEHV 119

Query: 130 PQMIY-LIQNIILHGHAYEA-NNEIIFD-------TSSIPNYGSFSRRKIDEQKMGTRVP 180
              I   IQ ++ +G AY A + ++ FD       T++   YG  +   +      +R+ 
Sbjct: 120 ETAILPYIQRLVDNGTAYCATSGDVYFDVRAFEDRTNARTRYGKLA-PPVSATDFYSRLD 178

Query: 181 EKYH--KKNPADFILWKRSTPMEP-GWESP-WGRGRPGWHIECSAMSSHYLGKV-----F 231
           +     K++P DF+LWKR    E   W +P WG GRPGWHIECSAM      +      F
Sbjct: 179 QTAETVKRDPRDFVLWKRRKEGEALFWTAPVWGEGRPGWHIECSAMIQAVQEQFQQTHRF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCC-----ADRIEKTA-------NIWIHNGFLNLEGRKMS 279
            +H GG+DL FPHH NEIAQ+        D +  T          WIH G ++++G KMS
Sbjct: 239 VVHAGGVDLQFPHHTNEIAQAEAHVLPDLDNVTDTTLPVQEWIPHWIHTGHVHIDGLKMS 298

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEA 330
           KS  NF++I ELL+       S PA   RL  L     YR P  ++   ++++
Sbjct: 299 KSLKNFVSIEELLQDDNPSSLSSPADDFRLWCLGMSGSYRGPATYSRDAVSQS 351


>gi|302657026|ref|XP_003020246.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
 gi|291184058|gb|EFE39628.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
          Length = 804

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 175/365 (47%), Gaps = 57/365 (15%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T +   +F++D   L  L P    R T  +P+++  ++ II H   Y   +  + FD  
Sbjct: 243 LTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIE 302

Query: 158 SIPNYGS-------FSRRKIDEQKMG--TRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G+       ++R   + Q  G  +   ++  KK+ ADF LWK S   EP W SPW
Sbjct: 303 NFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSSADFALWKASKAGEPSWPSPW 362

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ------SCCADRIEKTA 262
           G GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NEIAQ      S C+    +  
Sbjct: 363 GNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSSTCSHV--QWV 420

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N +IH G L+++G KMSKS  NF TI + L+   +  RS     +R+  L+  +R+ I+ 
Sbjct: 421 NYFIHMGHLSIQGSKMSKSLKNFTTIRDALQRGDWTPRS-----LRIVFLLGGWRDGIEI 475

Query: 323 TVQ--------------RLTEAEILLSKWPQTSTSKGIIDPAVLSA--------LYNDLN 360
           T +                  A+    K P+T++ + +  PA L A        L +  N
Sbjct: 476 TDEIVKAGNAWEEKVNNFFIRAKDPSVKLPETTSDEEL--PAALKAAQDSVHKHLCDSFN 533

Query: 361 TVSAIQALHKL----------ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
           T  A+ A+ +L          A  +   H +     +  +I G+       ++NI    +
Sbjct: 534 TAGAMYAISELITKFNNTSEAALSAQNTHAVAKWLTSMVNIFGLNSTAGPDSENIGWHGD 593

Query: 411 KLVQE 415
           ++ +E
Sbjct: 594 EIAEE 598



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+ 
Sbjct: 26  LKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V Y+ NITD+DDKII R RQ+H
Sbjct: 85  KFDVKYIMNITDVDDKIITRGRQQH 109


>gi|302506132|ref|XP_003015023.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
 gi|291178594|gb|EFE34383.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
          Length = 844

 Score =  162 bits (411), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 175/365 (47%), Gaps = 57/365 (15%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T++   +F++D   L  L P    R T  +P+++  ++ II H   Y   +  + FD  
Sbjct: 283 LTTEYENRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIE 342

Query: 158 SIPNYGS-------FSRRKIDEQKMG--TRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G+       ++R   + Q  G  +   ++  KK+ ADF LWK S   EP W SPW
Sbjct: 343 NFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSSADFALWKASKAGEPSWPSPW 402

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ------SCCADRIEKTA 262
           G GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NEIAQ      S C+    +  
Sbjct: 403 GNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSSTCSHV--QWV 460

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N +IH G L+++G KMSKS  NF TI + L    +  RS     +R+  L+  +R+ I+ 
Sbjct: 461 NYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGDWTPRS-----LRIVFLLGGWRDGIEI 515

Query: 323 TVQ--------------RLTEAEILLSKWPQTSTSKGIIDPAVLSA--------LYNDLN 360
           T +                  A+    K P+T++ + +  PA L A        L +  N
Sbjct: 516 TDEIVKAGNAWEEKVNNFFIRAKDPSVKLPETTSDEEL--PAALKAAQDSVHKHLCDSFN 573

Query: 361 TVSAIQALHKL----------ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
           T  A+ A+ +L          A  +   H +     +  +I G+       ++NI    +
Sbjct: 574 TAGAMYAISELITKFNNTSEAALSAQNTHAVAKWLTSMVNIFGLNSTAGPDSENIGWYGD 633

Query: 411 KLVQE 415
           ++ +E
Sbjct: 634 EIAEE 638



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 86/160 (53%), Gaps = 23/160 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+ 
Sbjct: 66  LKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDYF- 124

Query: 63  EKCVTYVRNITDIDDKIIERARQ---------EHPSIPINDAISIITSKNTQQ--FVKDT 111
           +  V Y+ NITD+DDKII R RQ         EHPSI   D   + T+K   +    K+ 
Sbjct: 125 KFDVKYIMNITDVDDKIITRGRQQHLYNQFSAEHPSI---DQELLDTAKAAYEAYITKNL 181

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
             +    PTH+ + T    + +Y     +L G   E N++
Sbjct: 182 PLVPVSTPTHELKDT---AEKVYA---AVLDGKPLEGNSK 215


>gi|322706523|gb|EFY98103.1| cysteinyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 799

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 129/239 (53%), Gaps = 20/239 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T +    F++D   L  L P    R T ++PQ+   ++ I+  G AYEA   + FD ++
Sbjct: 212 LTKRMEAVFLEDMDNLNVLRPDVITRVTEYVPQIAKFVEQIVDKGFAYEAEGSVYFDIAA 271

Query: 159 IPNYG-SFSRRKID--------EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R + D        E+  G+       K+   DF LWK+S   EP W S WG
Sbjct: 272 FQKAGNTYARLRPDSKNNKALQEEGEGSLSTNLGGKRGAGDFALWKKSKAGEPYWPSKWG 331

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEKT-ANI 264
            GRPGWHIECS M+S  LG   D+H GG+DL FPHH+NE+AQS    C   + E T  N 
Sbjct: 332 DGRPGWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNELAQSEAYFCQHGKGEHTWVNY 391

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           ++H G L++ G KMSKS  NF TI + L T      ++ A  +R+  LM  + + ++ +
Sbjct: 392 FLHMGHLSISGSKMSKSLKNFQTIADALAT------TYTARSMRIVFLMGRWNDGVEIS 444



 Score = 75.5 bits (184), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/83 (42%), Positives = 57/83 (68%), Gaps = 2/83 (2%)

Query: 5  IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          IK++N+L+      F  ++P  +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+G 
Sbjct: 4  IKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVTSDIIRRIMMHYFGF 63

Query: 64 KCVTYVRNITDIDDKIIERARQE 86
            V YV N+TD+DDKII +AR++
Sbjct: 64 N-VKYVMNMTDVDDKIIIKARRQ 85


>gi|320580808|gb|EFW95030.1| Cysteinyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 737

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/234 (37%), Positives = 128/234 (54%), Gaps = 17/234 (7%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII------FDTSSI 159
           ++ +D   L  L PT   R + ++P+++  +Q II  G+AY  ++  +      FD    
Sbjct: 215 KYDEDMAALNVLPPTIVTRVSEYVPEIVAFVQQIIDKGYAYATSDGSVYFNVAKFDKDPA 274

Query: 160 PNYGS---FSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
             Y     +S+  ++  + G   +     K N +DF LWK S   EP W SPWG GRPGW
Sbjct: 275 HEYAKLQPWSKGNLELLEDGEGSLSAAQGKLNASDFALWKASKAGEPSWPSPWGPGRPGW 334

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIECS M++ ++G   DIH GG+DL FPHH+NE+AQS      ++  N ++H G L++EG
Sbjct: 335 HIECSVMAADFVGDKLDIHSGGIDLAFPHHDNELAQSEAHYDCKQWVNYFLHTGHLHIEG 394

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           +KMSKS  NFITI E L      GR + A  +RL   +  +   +DF    L E
Sbjct: 395 QKMSKSLKNFITIEEAL------GR-YSARQLRLCFALVQWNNALDFKESLLNE 441



 Score = 80.1 bits (196), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 1/81 (1%)

Query: 7  IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
          +YNTL R    F       +  Y CGPTVY+ +H+G+AR  +  D+  R+L+ Y+G   V
Sbjct: 17 LYNTLTRSKVPFVPSSSDEVTWYSCGPTVYNSSHMGHARNYVTIDINRRILQDYFGYN-V 75

Query: 67 TYVRNITDIDDKIIERARQEH 87
           +V+N+TDIDDKII +ARQEH
Sbjct: 76 KFVQNVTDIDDKIIIKARQEH 96


>gi|330939693|gb|EGH42992.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 187

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 80/192 (41%), Positives = 119/192 (61%), Gaps = 9/192 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIEAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWK 195
            K++P DF+LWK
Sbjct: 174 SKEDPLDFVLWK 185


>gi|299751746|ref|XP_002911681.1| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298409516|gb|EFI28187.1| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 801

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 133/269 (49%), Gaps = 41/269 (15%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSF 165
           F +D   L  L PT   R +  IP+ I  +Q II +G AY      + FD  +    G +
Sbjct: 241 FNEDLRTLNILPPTVTTRVSEFIPENIAFVQQIIDNGFAYAIPGGTVYFDVDAFERAGHY 300

Query: 166 ----------SRRKIDEQKMGTRVP-------------EKYHKKNPADFILWKRSTPMEP 202
                        K +E       P             EK  K++P DF LWK+S   EP
Sbjct: 301 YAKLEPGNRKGEAKQEEDTPAVEAPTNVATTSEAEIQNEKAQKRSPRDFALWKKSRVGEP 360

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC-------- 254
           GWESPWG GRPGWHIECSAM+S  LG  FDIH GG+DL FPHH+NE+AQS          
Sbjct: 361 GWESPWGYGRPGWHIECSAMASQVLGAQFDIHSGGIDLAFPHHDNELAQSEAYWHKNPKE 420

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +    +  N +IH G L++ G KMSKS  NFI+I + L +       W A  +R+  +M 
Sbjct: 421 SRGPVQWVNYFIHMGHLSIAGSKMSKSLKNFISIRDALASG-----DWTARKLRILFMMG 475

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTS 343
            ++  ++ +     E ++    W +T T+
Sbjct: 476 GWKGGLEISQNFRAEVDL----WEKTVTN 500



 Score = 89.7 bits (221), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 41/83 (49%), Positives = 60/83 (72%), Gaps = 3/83 (3%)

Query: 7   IYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +YN+L +  T F  +DPS   +  Y CGPTVYD  H+G+AR  +  DVL R++R Y+G +
Sbjct: 26  LYNSLTKTKTPFIPVDPSGRKVTWYCCGPTVYDAGHLGHARNYLTTDVLRRIMRDYFGYE 85

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V +V+N+TD+DDKII+RAR++H
Sbjct: 86  -VEFVQNVTDVDDKIIKRAREQH 107


>gi|152965802|ref|YP_001361586.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|310947187|sp|A6W933|MSHC_KINRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|151360319|gb|ABS03322.1| Cysteine--tRNA ligase [Kineococcus radiotolerans SRS30216]
          Length = 419

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 107/361 (29%), Positives = 175/361 (48%), Gaps = 36/361 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCG T YD  H+G+A   + FD+L R  R    +  V YV+N+TD+DD ++ERA  E 
Sbjct: 41  LYVCGITPYDATHLGHANTYVAFDLLGRAWRDAGLD--VRYVQNVTDVDDPLLERA--EA 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   D    +     + F  D   L+ + P         +  +   +++++  G AY 
Sbjct: 97  TGVDWRD----LAESQVELFRGDMEALSVVPPQRYLGVVEAVDLVAEAVRDLLAAGAAYR 152

Query: 148 A-------NNEIIFDTSSIPNYGSFSRRKID------EQKMGTRVPEKYHKKNPADFILW 194
                   + ++ F   +   +G+     ++       ++ G   P++  K+NP D +LW
Sbjct: 153 VPGTDGGPDGDVYFPVDADAAFGTVGGYDLETMLALSAERGGD--PQRPGKRNPLDPLLW 210

Query: 195 KRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS- 252
           +   P EP WE+   GRGRPGWHIEC+A++  +LG   D+  GG DL+FPHHE   A + 
Sbjct: 211 RVERPGEPAWEAGELGRGRPGWHIECTAIALEHLGMPIDVQAGGSDLVFPHHEMGAAHAH 270

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
               R    A  + H+G + L+G KMSKS GN + ++ L+           A V+RLA++
Sbjct: 271 LLRPRARPFARAYAHSGMVALDGEKMSKSKGNLVLVSRLVAAGVP------AAVVRLAIV 324

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-----LYNDLNTVSAIQA 367
             H+R   ++T + L +A     +W     +        L A     L +DL+   A+ A
Sbjct: 325 DHHWRTDWEWTDEVLAQARARHERWSAAVAAPAGPPAEALLATVRERLADDLDAPGAVAA 384

Query: 368 L 368
           +
Sbjct: 385 V 385


>gi|326480593|gb|EGE04603.1| cysteinyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 790

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/365 (30%), Positives = 174/365 (47%), Gaps = 57/365 (15%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T +   +F++D   L  L P    R T  +P+++  ++ II H   Y   +  + FD  
Sbjct: 243 LTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIE 302

Query: 158 SIPNYGS-------FSRRKIDEQKMG--TRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G+       ++R   + Q  G  +   ++  KK+ ADF LWK S   EP W SPW
Sbjct: 303 NFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAKKKSSADFALWKASKAGEPSWPSPW 362

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ------SCCADRIEKTA 262
           G GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NEIAQ      S C+    +  
Sbjct: 363 GNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSSTCSHV--QWV 420

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N +IH G L+++G KMSKS  NF TI + L    +  RS     +R+  L+  +R+ I+ 
Sbjct: 421 NYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGDWTPRS-----LRIVFLLGGWRDGIEI 475

Query: 323 TVQ--------------RLTEAEILLSKWPQTSTSKGIIDPAVLSA--------LYNDLN 360
           T +                  A+    K P+T++ + +  PA L A        L +  N
Sbjct: 476 TDEIVKAGNAWEEKVNNFFIRAKDPSVKLPETTSDEEL--PAALKAAQDSVHKHLCDSFN 533

Query: 361 TVSAIQALHKL----------ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
           T  A+ A+ +L          A  +   H +     +  +I G+       ++NI    +
Sbjct: 534 TAGAMYAISELITKFNNTNEAALSAQNTHAVAKWLTSMVNIFGLNSTAGPDSENIGWYGD 593

Query: 411 KLVQE 415
           ++ +E
Sbjct: 594 EIAEE 598



 Score = 88.6 bits (218), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 86/160 (53%), Gaps = 23/160 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+ 
Sbjct: 26  LKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQ---------EHPSIPINDAISIITSKNTQQ--FVKDT 111
           +  V Y+ NITD+DDKII R RQ         EHPSI   D   + T+K   +    K+ 
Sbjct: 85  KFDVKYIMNITDVDDKIITRGRQQHLYDQFSAEHPSI---DQELLDTAKAAYEAYIAKNL 141

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
             +    PTH+ + T    + +Y     +L G   E N++
Sbjct: 142 PLIPVSTPTHELKDT---AEEVYA---AVLDGKPLEGNSK 175


>gi|156063134|ref|XP_001597489.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980]
 gi|154697019|gb|EDN96757.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 753

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 128/239 (53%), Gaps = 20/239 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    +QF++D   L  L P    R T ++P++   ++ II  G AYE++  + FD ++
Sbjct: 169 VTQYWEEQFMEDMDALNVLRPDVITRVTTYVPKIATFVEKIIQKGFAYESDGSVYFDIAA 228

Query: 159 IPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G         S + + + E+  G+       K+   DF LWK+S   EP W SPWG
Sbjct: 229 FEKAGNPYARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWG 288

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS---CCADR--IEKTANI 264
            GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS    C       +  N 
Sbjct: 289 EGRPGWHIECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCEHEHGPHEWVNY 348

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           ++H G L++ G KMSKS  NF TI + L T  +  RS     +R+  LM  + + ++ +
Sbjct: 349 FLHMGHLSIAGSKMSKSLKNFQTIRDALAT-DYTPRS-----MRIVFLMGRWNDGVEIS 401


>gi|170782058|ref|YP_001710390.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|310947179|sp|B0RC50|MSHC_CLAMS RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|169156626|emb|CAQ01778.1| putative cysteinyl-tRNA synthetase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 409

 Score =  161 bits (408), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/344 (30%), Positives = 161/344 (46%), Gaps = 37/344 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRYYYGEK 64
           +++T    +   +      + +YVCG T YD  HIG+A   + FD L R  L R Y    
Sbjct: 1   MFDTSAGSVRPAECTGDGRVGLYVCGITPYDATHIGHASTYLAFDTLQRVWLDRGYD--- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TD+DD ++ERA      +   D    + ++  + F  D   L  L P     
Sbjct: 58  -VAYVQNVTDVDDPLLERATAT--GVDWRD----LAAEQVELFRTDMEALRILPPDSYVG 110

Query: 125 ATNHIPQMIYLIQNIILHGHAY---------EANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
            T  + ++   +  ++  G AY             ++ FD +     G ++        +
Sbjct: 111 VTEVVDEVASAVAELVRRGTAYPVATPDAVVAGAQDLYFDVARAGEDGPWALGDESGYDL 170

Query: 176 GTRV---------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
            T           PE+  K++P D +LW+     EP W+S  GRGRPGWHIEC+ ++   
Sbjct: 171 DTMAALSAERGGDPERPGKRDPLDPLLWRAERAGEPAWDSVVGRGRPGWHIECAVIALRK 230

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L +   + GGG DLIFPHHE   A    A   E  A ++ H+G +  +G KMSKS GN +
Sbjct: 231 LDRPVTVQGGGSDLIFPHHEMS-AGHAAALTGEDFACVYAHSGMVAYQGEKMSKSLGNLV 289

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            ++  L       R+     IRLA+L  HYR   ++T + L E+
Sbjct: 290 LVSR-LRAAGVDPRA-----IRLALLAQHYRADWEWTDELLAES 327


>gi|315055169|ref|XP_003176959.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338805|gb|EFQ98007.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 818

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 140/290 (48%), Gaps = 33/290 (11%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +T     +F++D   L  L P    + T HI ++I  ++ II +G AY   +  + F+ +
Sbjct: 255 LTKNYESRFLEDMRCLNVLEPDKLTKVTTHISEIIQFVKTIIGNGFAYSTPDGSVYFNIN 314

Query: 158 SIPNYGSF---------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
                G +           + +     G+       K +  DF+LWK S P EP W SPW
Sbjct: 315 KFEESGHYYAKLEPWNRHNKHLQRDGEGSLSKGATSKLSRNDFVLWKASRPGEPSWPSPW 374

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAM+S   G   DIH GG+DL FPHH+NE+AQS       +  N ++H 
Sbjct: 375 GNGRPGWHIECSAMASANFGSQMDIHSGGIDLAFPHHDNELAQSEAFWGGTQWVNYFLHM 434

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L+++G KMSKS  NF TI E L+       +W +  +R+  L++ +RE I+ T   + 
Sbjct: 435 GHLSIQGSKMSKSLKNFTTIREALDRG-----TWTSRNLRIVFLLSGWREGIEITTDMVD 489

Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
            +     K                  L N        +ALHKLA E+  N
Sbjct: 490 ASRAWEEK------------------LNNFFLKSRNFKALHKLASEAPNN 521



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 58/85 (68%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++N+L R  T F   DP+   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y+ 
Sbjct: 24  LRVWNSLTRSKTHFVPADPNGQKVTWYACGPTVYDDAHLGHARNYVTTDILRRIMRDYFK 83

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
              V ++ NITD+D+KII RARQ+H
Sbjct: 84  FD-VNFIMNITDVDNKIIIRARQQH 107


>gi|291319975|ref|YP_003515233.1| cysteinyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752304|emb|CBH40275.1| Cysteinyl tRNA synthetase (Cysteine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 413

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/322 (34%), Positives = 161/322 (50%), Gaps = 31/322 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP+I FD + +  R     K   +V NITD+DDKII +A Q
Sbjct: 2   LKIYVCGPTVYNEPHIGNLRPIITFDFMLKAYREL--NKEFKFVHNITDVDDKIINKAIQ 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ----PRATNHIPQMIYLIQNIIL 141
                     + +  S+    + K   RL  +   +      + T +I  +   ++ +  
Sbjct: 60  ----------MDVKESEVASFYFKSYQRLLRMLNVNTISKIEKVTKNINVINKYVEKLYQ 109

Query: 142 HGHAY-EANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             +AY +AN  + FD   +  NYG  S + ID          K  K    DF LWK ST 
Sbjct: 110 TENAYKDANGNVWFDVLKNKSNYGLVSNQNIDNMVFDENSLLKRFK---GDFALWK-STA 165

Query: 200 MEPGWESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +   + S +G GRPGWH ECSA+   H+     DIHGGG+DL FPHHENE  Q     + 
Sbjct: 166 VGIKFRSSFGMGRPGWHTECSALIDKHFGSDGVDIHGGGMDLTFPHHENENIQHYALYQ- 224

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           ++ A  WI  G LNL+G KMSKS GN I   + +   K+G     A +++L         
Sbjct: 225 KQLAKEWIRCGQLNLDGEKMSKSVGNVILAEDFIN--KYG-----AAILKLIFFNAKVSA 277

Query: 319 PIDFTVQRLTEAEILLSKWPQT 340
            I+ T + +   + + +K+ + 
Sbjct: 278 SINITSELIENMKAIENKYKKV 299


>gi|326469078|gb|EGD93087.1| cysteinyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 804

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 131/241 (54%), Gaps = 23/241 (9%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T +   +F++D   L  L P    R T  +P+++  ++ II H   Y   +  + FD  
Sbjct: 243 LTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIE 302

Query: 158 SIPNYGS-------FSRRKIDEQKMG--TRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G+       ++R   + Q  G  +   ++  KK+ ADF LWK S   EP W SPW
Sbjct: 303 NFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAKKKSSADFALWKASKAGEPSWPSPW 362

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ------SCCADRIEKTA 262
           G GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NEIAQ      S C+    +  
Sbjct: 363 GNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSSTCSHV--QWV 420

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N +IH G L+++G KMSKS  NF TI + L    +  RS     +R+  L+  +R+ I+ 
Sbjct: 421 NYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGDWTPRS-----LRIVFLLGGWRDGIEI 475

Query: 323 T 323
           T
Sbjct: 476 T 476



 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 86/160 (53%), Gaps = 23/160 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+ 
Sbjct: 26  LKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQ---------EHPSIPINDAISIITSKNTQQ--FVKDT 111
           +  V Y+ NITD+DDKII R RQ         EHPSI   D   + T+K   +    K+ 
Sbjct: 85  KFDVKYIMNITDVDDKIITRGRQQHLYDQFSAEHPSI---DQELLDTAKAAYEAYIAKNL 141

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
             +    PTH+ + T    + +Y     +L G   E N++
Sbjct: 142 PLIPVSTPTHELKDT---AEEVYA---AVLDGKPLEGNSK 175


>gi|312220209|emb|CBY00150.1| similar to cysteinyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 803

 Score =  160 bits (406), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/243 (38%), Positives = 130/243 (53%), Gaps = 25/243 (10%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTS 157
           +T K   +F +D   L  L P    R T +  Q++  ++ I+ +G AY+ ++  + FD  
Sbjct: 239 LTQKYEARFNEDMRSLNVLDPHVVTRVTEYGDQIVTFVEKIVDNGFAYKTSDGSVYFDID 298

Query: 158 S---IP----------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           S   IP          N G    +   E  + T+  +   K++ ADF LWK S P EP W
Sbjct: 299 SFEKIPGNHYARLEPWNRGDKGLQADGEGALSTQ--KTSEKRSDADFALWKSSKPGEPAW 356

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEK 260
            SPWG GRPGWHIECS M+S  LGK  D+H GG+DL FPHH+NE+AQS       D   +
Sbjct: 357 NSPWGPGRPGWHIECSVMASDVLGKQMDVHSGGIDLCFPHHDNELAQSEAHWSGKDGGHQ 416

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
             N ++H G L++ G KMSKS  NF TI E L  K +  RS     +R+  L+  + + I
Sbjct: 417 WVNYFLHMGHLSISGSKMSKSLKNFTTIREALARKDWNARS-----LRIIFLLGGWHDGI 471

Query: 321 DFT 323
           + T
Sbjct: 472 EIT 474



 Score = 91.7 bits (226), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 43/86 (50%), Positives = 60/86 (69%), Gaps = 3/86 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+K++N+L R   EF  IDP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L  Y+
Sbjct: 22  KLKVWNSLTRSKNEFAPIDPQGKLVKWYNCGPTVYDDAHLGHARNYVTIDILRRILSDYF 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
             K + +V+NITD+DDKII R RQ+H
Sbjct: 82  EYKLL-FVQNITDVDDKIILRGRQQH 106


>gi|291234575|ref|XP_002737225.1| PREDICTED: cysteinyl-tRNA synthetase-like [Saccoglossus
           kowalevskii]
          Length = 739

 Score =  160 bits (405), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 137/254 (53%), Gaps = 26/254 (10%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
           N   S++     +++ +D   +  L      R +++IP+++  ++ II +G+ Y +N  +
Sbjct: 203 NSIFSLLPKYWEEEYHRDMASINVLPADVLTRVSDYIPEVVEYVKKIIDNGYGYVSNGSV 262

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGT----------------RVPEKYHKKNPADFILWKR 196
            F  S+  N  + S  K+  + +G                 R+ EK   K+  DF +WK+
Sbjct: 263 YFSVSTFDNDPNHSYAKLVPEAVGDCKALEEGEGDLSISQDRLDEK---KSQVDFAVWKK 319

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           S P EP W+SPWG+GRPGWHIECS M+S  LG+  DIH GG DL FPHH+NE+AQ+    
Sbjct: 320 SKPGEPAWDSPWGKGRPGWHIECSVMASCILGESLDIHTGGFDLRFPHHDNELAQAEAYY 379

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +     ++H+G L ++G KMSKS  NFITI + LE          +  +RL  L+  +
Sbjct: 380 GNDHWVRYFLHSGHLTIQGCKMSKSLKNFITIKDALENH-------TSRQLRLVFLLHSW 432

Query: 317 REPIDFTVQRLTEA 330
           ++ +D++   +  A
Sbjct: 433 KDTLDYSDNTMESA 446



 Score = 79.7 bits (195), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 55/84 (65%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R+   F   +   +  Y CGPTVYD +H+G+AR + +FD+L R+L  Y+  
Sbjct: 24  QLYLYNSLTRQRELFIPQNGKQVLWYSCGPTVYDASHMGHARSLHIFDILRRILSEYFNY 83

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 84  D-VVYCMNITDIDDKIIRRARQNY 106


>gi|115433550|ref|XP_001216912.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
 gi|114189764|gb|EAU31464.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
          Length = 811

 Score =  160 bits (404), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 133/251 (52%), Gaps = 22/251 (8%)

Query: 89  SIPIND--AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           SI  ND    + +T K  ++F +D   L  L P    R T ++PQ++  I+ +I  G AY
Sbjct: 229 SIDSNDHSIFTRLTEKFEKRFFEDMNSLNVLYPDVLTRVTEYVPQVVSFIEKVIASGFAY 288

Query: 147 EA-NNEIIFDTSSIPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKR 196
              +  + FD  +    G +++R        + +     G+   +   K++ +DF LWK 
Sbjct: 289 ATPDGSVYFDIEAFEKAGHNYARLEPWNRNDKSLLADGEGSLTNKTTVKRSESDFALWKA 348

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS---- 252
           S P EP W SPW  GRPGWHIECS M+S  LGK  DIH GG DL FPHH+NE+AQS    
Sbjct: 349 SKPGEPSWPSPWAPGRPGWHIECSVMASDVLGKAIDIHSGGADLRFPHHDNELAQSEAYW 408

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
               R++   N +IH G L+++G KMSKS  NF TI   L   ++  RS     +R+  L
Sbjct: 409 STGPRVQ-WVNYFIHTGHLSIQGMKMSKSLKNFTTIRAALSQGQWTSRS-----LRICFL 462

Query: 313 MTHYREPIDFT 323
           +  +   ++ T
Sbjct: 463 LGPWEAGVEVT 473



 Score = 89.4 bits (220), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 44/85 (51%), Positives = 59/85 (69%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R+  ++  IDP       Y CGPTVYD AH+G+AR  +  D+L R+L+ Y+G
Sbjct: 25  LKIYNSLTRRKDDYVPIDPEGKATTWYTCGPTVYDDAHMGHARNYVSTDILRRILKDYFG 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
            + V YV NITDIDDKII R RQ++
Sbjct: 85  YQ-VKYVMNITDIDDKIILRGRQQY 108


>gi|164658560|ref|XP_001730405.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
 gi|159104301|gb|EDP43191.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
          Length = 823

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 128/246 (52%), Gaps = 39/246 (15%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNE---IIFDTSSIPN 161
           F  D  RL    PT   R + ++P+++  I+ I+ +G AY  +A+ E   + F TS    
Sbjct: 260 FFHDMKRLHVEPPTILTRVSEYVPEIVQFIERILQNGFAYVDDASAESKNVWFATSQFDG 319

Query: 162 YG-------------------------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
                                      S   R++ E+  G    +   K+N ADF LWKR
Sbjct: 320 SACVAGALAENQPEAREHHFYAKLAPWSKGNRELLEEGEGALAAKG--KRNAADFALWKR 377

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           + P EP W SPWG GRPGWHIECS M+S  LG   DIH GG+DL+FPHH+NE+AQS    
Sbjct: 378 AKPGEPAWPSPWGPGRPGWHIECSVMASKVLGSQIDIHSGGIDLMFPHHDNELAQSEAFH 437

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
              +  N ++H G L++EG KMSKS  NFI+I+E L         + A  +RLA LM  +
Sbjct: 438 GCPQWINYFLHTGHLHIEGLKMSKSLKNFISIDEALA-------RYTARQLRLAFLMHPW 490

Query: 317 REPIDF 322
              +DF
Sbjct: 491 HAKMDF 496



 Score = 78.2 bits (191), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 53/83 (63%), Gaps = 1/83 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F       +  Y CGPTVYD +H+G+AR  +  DV+ R++R Y G 
Sbjct: 23  ELHVYNSLTRSKERFVPKRGRLVTWYNCGPTVYDASHMGHARNYVTQDVIRRIMRDYLGY 82

Query: 64  KCVTYVRNITDIDDKIIERARQE 86
             V +V N+TDIDDKII RARQE
Sbjct: 83  D-VNFVMNVTDIDDKIIMRARQE 104


>gi|323651396|gb|ADX97544.1| cysteinyl-tRNA synthetase [Moumou virus]
          Length = 417

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 112/323 (34%), Positives = 166/323 (51%), Gaps = 43/323 (13%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I+MYVCGPTVY+ AHIG+AR  ++ D++ + +  +     +  V NITDIDDKII+ +  
Sbjct: 7   IKMYVCGPTVYNDAHIGHARVYMMVDLINKTMNRFLNRNTLL-VMNITDIDDKIIKAS-- 63

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E   I   +    ++ K   +F    ++L    P    R +  I  +I  IQNII +  A
Sbjct: 64  EINGISWQE----LSKKYEDKFFTSMSQLNIDLPDIIIRVSESIIDIIEYIQNIINNNFA 119

Query: 146 YEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR-------VPEKYHKKNPADFILWKRS 197
           Y  ++  + FDT S  N G     +IDE+++          + +K HKK   DF LWK  
Sbjct: 120 YITDDGSVYFDTISYINAGYEFSFEIDEEEISYESQISNDIINQKKHKK---DFALWKSR 176

Query: 198 TPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           T    G+++ +          G PGWHIECS M    +G   DIH GG+DL FPHH NE 
Sbjct: 177 TKNNVGFDANFSFNGNLIKTYGIPGWHIECSTMIHKTIGNHLDIHFGGIDLKFPHHHNEN 236

Query: 250 AQSCC--------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
            Q+C          D+ ++  N ++H G L ++G+KMSKS  NF TI+++L+        
Sbjct: 237 LQACAYYHPKYHPNDKTKEWTNKFMHIGHLCIKGKKMSKSLKNFSTIDDILQDLTPNEFR 296

Query: 302 WPAPVIRLAMLMTH-YREPIDFT 323
           W        M M H ++ P++F 
Sbjct: 297 W--------MFMQHKWQNPMEFN 311


>gi|256087600|ref|XP_002579954.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
 gi|238665453|emb|CAZ36193.1| cysteinyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 843

 Score =  160 bits (404), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 130/240 (54%), Gaps = 25/240 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-- 161
           ++++ D   L  + P+   R T +I  +I  ++ II +G AY   +  + FDT+   +  
Sbjct: 236 KEYLVDMECLNIIPPSVLVRVTEYIDPIIKYVKQIIDNGFAYVVPSGSVYFDTNRFASSP 295

Query: 162 -----------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
                      YG  S+ +  E ++         KK+  DF LWK S P EP W SPWG+
Sbjct: 296 MHFYAKLVPTAYGDTSQLESGEGELCI----TGEKKSSNDFALWKASKPGEPSWPSPWGK 351

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS          N ++H+G 
Sbjct: 352 GRPGWHIECSVMASDILGDTLDIHSGGVDLKFPHHDNELAQSEAYFGHSHWVNYFLHSGH 411

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           L + G KMSKS  NFITI + L+T         +  IRL  L+  +R+ +D++V  L EA
Sbjct: 412 LTISGCKMSKSLKNFITIRDALKTHT-------SRQIRLIFLLHSWRDTMDYSVDTLAEA 464



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 1/81 (1%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L  +   F   D  +++ Y CGPTVYD +H+G+AR  + FDV+ R+L  Y+  K V
Sbjct: 55  LYNSLTSQKDLFIPQDGRHVKWYTCGPTVYDVSHLGHARTYVAFDVIRRVLMDYFNFK-V 113

Query: 67  TYVRNITDIDDKIIERARQEH 87
           TYV NITDIDDKII+RARQ H
Sbjct: 114 TYVLNITDIDDKIIKRARQNH 134


>gi|256087602|ref|XP_002579955.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
 gi|238665454|emb|CAZ36194.1| cysteinyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 814

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 130/240 (54%), Gaps = 25/240 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-- 161
           ++++ D   L  + P+   R T +I  +I  ++ II +G AY   +  + FDT+   +  
Sbjct: 207 KEYLVDMECLNIIPPSVLVRVTEYIDPIIKYVKQIIDNGFAYVVPSGSVYFDTNRFASSP 266

Query: 162 -----------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
                      YG  S+ +  E ++         KK+  DF LWK S P EP W SPWG+
Sbjct: 267 MHFYAKLVPTAYGDTSQLESGEGELCI----TGEKKSSNDFALWKASKPGEPSWPSPWGK 322

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS          N ++H+G 
Sbjct: 323 GRPGWHIECSVMASDILGDTLDIHSGGVDLKFPHHDNELAQSEAYFGHSHWVNYFLHSGH 382

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           L + G KMSKS  NFITI + L+T         +  IRL  L+  +R+ +D++V  L EA
Sbjct: 383 LTISGCKMSKSLKNFITIRDALKTHT-------SRQIRLIFLLHSWRDTMDYSVDTLAEA 435



 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 43/81 (53%), Positives = 57/81 (70%), Gaps = 1/81 (1%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L  +   F   D  +++ Y CGPTVYD +H+G+AR  + FDV+ R+L  Y+  K V
Sbjct: 26  LYNSLTSQKDLFIPQDGRHVKWYTCGPTVYDVSHLGHARTYVAFDVIRRVLMDYFNFK-V 84

Query: 67  TYVRNITDIDDKIIERARQEH 87
           TYV NITDIDDKII+RARQ H
Sbjct: 85  TYVLNITDIDDKIIKRARQNH 105


>gi|154312989|ref|XP_001555821.1| hypothetical protein BC1G_05496 [Botryotinia fuckeliana B05.10]
 gi|150849581|gb|EDN24774.1| hypothetical protein BC1G_05496 [Botryotinia fuckeliana B05.10]
          Length = 796

 Score =  159 bits (403), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 127/232 (54%), Gaps = 20/232 (8%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG-- 163
           QF++D   L  + P    R T ++P++   ++ II  G AYE++  + FD ++    G  
Sbjct: 219 QFMEDMDALNVMRPDVITRVTTYVPKIAIFVKKIIDKGFAYESDGSVYFDIAAFEKAGNP 278

Query: 164 -------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
                  S + + + E+  G+       K+   DF LWK+S   EP W SPWG GRPGWH
Sbjct: 279 YARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWGEGRPGWH 338

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADR-IEKTANIWIHNGFL 271
           IECS M+S  LG   DIH GG+DL FPHH+NE+AQS    C  ++   +  N ++H G L
Sbjct: 339 IECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCEHEQGPHEWVNYFLHMGHL 398

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           ++ G KMSKS  NF TI + L T  +  RS     +R+  LM  + + ++ +
Sbjct: 399 SIAGSKMSKSLKNFQTIRDAL-TTDYTPRS-----MRIVFLMGRWNDGVEIS 444



 Score = 73.2 bits (178), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 58/84 (69%), Gaps = 2/84 (2%)

Query: 4  KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
          ++K++N+L+      F  I+   +  YVCGPTVYD +H+G+AR  +  D++ R+++ Y+G
Sbjct: 3  QLKVHNSLKPGGPVPFVPIEKGKVSWYVCGPTVYDHSHLGHARNYVSTDIIRRIMKDYFG 62

Query: 63 EKCVTYVRNITDIDDKIIERARQE 86
             + +V NITD+DDKII +AR++
Sbjct: 63 FD-LNFVMNITDVDDKIILKARRQ 85


>gi|168027561|ref|XP_001766298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682512|gb|EDQ68930.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 736

 Score =  159 bits (402), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 123/232 (53%), Gaps = 14/232 (6%)

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---- 161
           +F  D + L C  P    R T ++ +++  ++ I+ +  AY AN  + FDT +       
Sbjct: 194 EFWDDMSALGCGYPDVLVRVTEYMDKIVEYVEVIVANKFAYVANESVYFDTRAFREAGHR 253

Query: 162 YGSFSRRKIDEQKMGTRVPEKY---HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
           YG  +   +    + +     +    K+   DF LWK+S P EP W+SPWG GRPGWHIE
Sbjct: 254 YGKLNPAAVGSSMLASESESNFDTSEKRTSCDFALWKKSKPGEPSWDSPWGPGRPGWHIE 313

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           CSAM+S  LG   DIH GG DL FPHH+NE+AQS       +    + H+G L+++G KM
Sbjct: 314 CSAMASDILGDSIDIHTGGHDLQFPHHDNELAQSEAYFHCHEWVRYFFHSGHLSIDGLKM 373

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           SKS  NFITI   L         + A  +R   ++  + + I+F+   + EA
Sbjct: 374 SKSLKNFITIKTALTM-------YTARQLRTLFVIQSWDKSINFSTTVVNEA 418



 Score = 37.0 bits (84), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 16/22 (72%), Positives = 18/22 (81%)

Query: 66  VTYVRNITDIDDKIIERARQEH 87
           V YV NITD+DDKII RAR+ H
Sbjct: 84  VKYVMNITDVDDKIINRARRNH 105


>gi|325963276|ref|YP_004241182.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469363|gb|ADX73048.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 425

 Score =  159 bits (402), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 191/401 (47%), Gaps = 45/401 (11%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           I++Y+T   R++   Q   PS   MYVCG T YD  H+G+A   + FD+L R  R    E
Sbjct: 19  IRLYDTAAGREVALEQENHPS---MYVCGITPYDATHMGHASSYVAFDLLNRAWRDAGQE 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD ++ERA      +   D    + +   + F  D   L  L P H  
Sbjct: 76  --VAYVQNVTDVDDPLLERATAT--GVDWRD----LAAGQIELFQTDMEALNVLPPDHYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDT------SSIPNYGSFSR-RK 169
            A   I  ++  ++ ++  G AY       E + ++ +D       S  P+  +      
Sbjct: 128 GAVESIGLIVPEVERLVSLGLAYKVDGTNGEPDGDVYYDVEAAGKQSVAPDAWTLGCISG 187

Query: 170 IDEQKMGTRV------PEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAM 222
           ++E +M          P +  K+   D +LW+     EP W     G GRPGWHIEC+ +
Sbjct: 188 LNESEMLELFAERGGDPGRAGKRQALDPLLWRVEREGEPSWPGGSLGPGRPGWHIECTVI 247

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +  YL + F + GGG DLIFPHHE     +     +   A  + H G + L+G KMSKS 
Sbjct: 248 AQKYLPQPFTVQGGGSDLIFPHHEMGAGHAYSLAGV-PLARHYAHAGMVGLDGEKMSKSK 306

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-- 340
           GN + +++L    +      PA  IRL +L  HYR    +T     +A+ +L+ W Q   
Sbjct: 307 GNLVLVSKLRAAGED-----PA-AIRLGILAHHYRSDWSWTDHGFEDAKAILASWRQALP 360

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
              + S   +  A+  AL  DLN  +A+ A+++ A ++  +
Sbjct: 361 HAPAGSAAPLVAAMREALAADLNAPAAVAAVNRWAEQALSD 401


>gi|156405455|ref|XP_001640747.1| predicted protein [Nematostella vectensis]
 gi|156227883|gb|EDO48684.1| predicted protein [Nematostella vectensis]
          Length = 634

 Score =  159 bits (401), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/237 (37%), Positives = 130/237 (54%), Gaps = 17/237 (7%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
           Q++ KD   L  L        T ++P+++  I+ +I +G+AYE+N  + FDT    +   
Sbjct: 209 QEYHKDMAALNVLPADILTNITEYVPEVVTFIEKVIANGYAYESNGSVYFDTIKFGSSEK 268

Query: 165 FSRRKIDEQKMGT--RVPEKY--------HKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
            S  ++  + +G    + E           K++  DF LWK S P EP WESPWG+GRPG
Sbjct: 269 HSYARLVPEAVGDLDALAEGEGELSQNLGEKRSERDFALWKASKPGEPSWESPWGKGRPG 328

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WH+ECS M+   LG   DI  GG++L FP H+NE+AQS     + +  N ++H G L +E
Sbjct: 329 WHVECSVMARDGLGSKIDIPTGGVNLKFPPHDNELAQSEAHFCVSQWVNYFLHAGHLTIE 388

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           G KMSKS  NFITI + L  K+   R      IRLA L+  +   +D++   + EAE
Sbjct: 389 GCKMSKSLKNFITIKQAL--KRNSSRQ-----IRLAFLLHTWNATLDYSQNVIREAE 438



 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          ++K+YN+L R+   F   +   +  Y CGPTVYD +H+G+AR  I FD++ R+L+ Y+  
Sbjct: 17 ELKLYNSLTREKNLFIPSNGRRVTWYSCGPTVYDASHMGHARSYITFDIVRRVLQSYFNY 76

Query: 64 KCVTYVRNITDIDDKIIERARQEH 87
            V  V N+TDIDDKII RAR+ H
Sbjct: 77 D-VFCVMNVTDIDDKIIHRARRNH 99


>gi|332670290|ref|YP_004453298.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Cellulomonas fimi ATCC 484]
 gi|332339328|gb|AEE45911.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Cellulomonas fimi ATCC 484]
          Length = 418

 Score =  158 bits (400), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 182/382 (47%), Gaps = 41/382 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCG T YD  H+G+A   + FDVL R  R     + V Y  N+TD+DD ++ERA    
Sbjct: 40  LYVCGITPYDATHLGHAATYVAFDVLGRAWRDA--GQQVRYASNVTDVDDPLLERATAT- 96

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
             +   D    + ++    + +D T L  + P         +P ++  +  ++  G AY 
Sbjct: 97  -GVEWQD----LAAEQVALYAEDMTALGVVPPDAWTGVVESVPAVVDAVAALVAAGAAYT 151

Query: 147 --------EANNEIIFDTSSIPNYGSFSRR------KIDEQKMGTRVPEKYHKKNPADFI 192
                   +   ++  D S+   +G+ +         +  ++ G   P +  K++P D +
Sbjct: 152 VDTPDALGDGPGDVYADLSADGAFGTVAGLDPATMLALSAERGGD--PGRPGKRSPLDPL 209

Query: 193 LWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           LW+R    EP W+    GRGRPGWHIEC+ ++   LG  FD+ GGG DL FPHHE   + 
Sbjct: 210 LWRRERAGEPAWDGGTLGRGRPGWHIECAVIARDSLGLPFDVEGGGSDLQFPHHEMSTSH 269

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV-IRLA 310
           +   D     A + +H G + L+G KMSKS GN + ++ L E           P+ IRLA
Sbjct: 270 ARLLD-AGHGARVHVHAGMVGLDGEKMSKSRGNLVLVSRLREDGVD-------PMAIRLA 321

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAI 365
           +L   Y E  D+T   L EA   L  W +  +  G  D      A+ +A+ +DL+T  A+
Sbjct: 322 ILAHRYSEDWDWTDAGLKEAVERLGGWRRALSGNGGPDATATIAALRAAVADDLDTPRAL 381

Query: 366 QALHKLARESTKNHDLLPIFNA 387
             +   A  + +  D  P+  A
Sbjct: 382 DVVDDWALAALRG-DAEPVEGA 402


>gi|325973156|ref|YP_004250220.1| cysteinyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651758|gb|ADX97840.1| cysteinyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 435

 Score =  158 bits (400), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 195/454 (42%), Gaps = 79/454 (17%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y+CGPT+Y++ H+GN RP++VFD L R  +     +   YV+N+TDID+KII +A+ 
Sbjct: 22  ITIYLCGPTLYNYLHLGNLRPIVVFDFLIRYFKII--NQPYKYVQNLTDIDEKIILKAKH 79

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E      N  +  I  +  + F      L  + P   P  + HI  + + I +++  G A
Sbjct: 80  E------NKTVKEIVDQYAESFFNILKNLNIVWPDQLPTVSTHIKNIQFHIDSLLKQGKA 133

Query: 146 -YEANNEII--FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
            ++   + I   +T        FS  ++DE+               + F LWK +     
Sbjct: 134 VWDKKTQTIRFLNTGKEKGLNYFSGNEVDEED--------------SCFALWKENNHTSY 179

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            WESPW  G PGWH+EC AM          IHGGG+DL FPHHENE    C        A
Sbjct: 180 SWESPWFPGIPGWHLECFAMIEDNFSLPITIHGGGVDLKFPHHENE-NLLCRFWHNHDLA 238

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
            +W+H G +  E  K+SKS+   + + E  E       SW    +R   +   Y +P   
Sbjct: 239 KVWVHVGQVLNEAGKLSKSSNYSLAVEECAEQ-----YSW--NFLRYIFMKVRYNKPFMI 291

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------------------------LYND 358
             + L+      S+W    T+    +  +L+A                        L ND
Sbjct: 292 NKEALSSY---WSEWKSYLTALNYAEITLLNAKHIFFCPEKELRKIEKPDETIVKHLEND 348

Query: 359 LN---TVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
           LN    +S ++ L K    S K  D   I F     +  +EV        +   +E+L +
Sbjct: 349 LNLPELLSWLEDLKKTLLNSIKKSDYDNILFYWKKLLTSLEV--------LGFTLERLSR 400

Query: 415 ERL-------ILLKMKKFSSADYIRKQLESKGFI 441
           E +        LL  K +  AD +R +L  KG +
Sbjct: 401 ENIDEAERWFDLLSQKNYEEADKLRLRLTEKGIL 434


>gi|325989599|ref|YP_004249298.1| Cysteinyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574684|emb|CBZ40340.1| Cysteinyl-tRNA synthetase [Mycoplasma suis]
          Length = 435

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 195/454 (42%), Gaps = 79/454 (17%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I +Y+CGPT+Y++ H+GN RP++VFD L R  +     +   YV+N+TDID+KII +A+ 
Sbjct: 22  ITIYLCGPTLYNYLHLGNLRPIVVFDFLIRYFKII--NQPYKYVQNLTDIDEKIILKAKH 79

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E      N  +  I  +  + F      L  + P   P  + HI  + + I +++  G A
Sbjct: 80  E------NKTVKEIVDQYAESFFNILKNLNIVWPDQLPAVSTHIKNIQFHIDSLLKQGKA 133

Query: 146 -YEANNEII--FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
            ++   + I   +T        FS  ++DE+               + F LWK +     
Sbjct: 134 VWDKKTQTIRFLNTGKEKGLNYFSGNEVDEED--------------SCFALWKENNHTSY 179

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            WESPW  G PGWH+EC AM          IHGGG+DL FPHHENE    C        A
Sbjct: 180 SWESPWFPGIPGWHLECFAMIEDNFSLPITIHGGGVDLKFPHHENE-NLLCRFWHNHDLA 238

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
            +W+H G +  E  K+SKS+   + + E  E       SW    +R   +   Y +P   
Sbjct: 239 KVWVHVGQVLNEAGKLSKSSNYSLAVEECAEQ-----YSW--NFLRYIFMKVRYNKPFMI 291

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------------------------LYND 358
             + L+      S+W    T+    +  +L+A                        L ND
Sbjct: 292 NKEALSSY---WSEWKSYLTALNYAEITLLNAKHIFFCPEKELRKIEKPDETIVKHLEND 348

Query: 359 LN---TVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
           LN    +S ++ L K    S K  D   I F     +  +EV        +   +E+L +
Sbjct: 349 LNLPELLSWLEDLKKTLLNSIKKSDYDNILFYWKKLLTSLEV--------LGFTLERLSR 400

Query: 415 ERL-------ILLKMKKFSSADYIRKQLESKGFI 441
           E +        LL  K +  AD +R +L  KG +
Sbjct: 401 ENIDEAERWFDLLSQKNYEEADKLRLRLTEKGIL 434


>gi|284990719|ref|YP_003409273.1| cysteine--tRNA ligase [Geodermatophilus obscurus DSM 43160]
 gi|284063964|gb|ADB74902.1| Cysteine--tRNA ligase [Geodermatophilus obscurus DSM 43160]
          Length = 391

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 167/350 (47%), Gaps = 25/350 (7%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           S  R+YVCG T YD  H+G+A   +  DVL  +LR   G   VT  RN+TD+DD +   A
Sbjct: 40  SPARVYVCGITPYDVTHLGHAATFVWADVLGSVLRLA-GADVVTS-RNVTDVDDVLTRAA 97

Query: 84  --RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
             R  H                   F +D   L    PTH PRA +H+  +  L   ++ 
Sbjct: 98  DARGRH--------FDEFALGQEFAFEQDLRALGVRPPTHVPRARHHVTHVQQLAAALLQ 149

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTRVPEKYHKKNPADFILWKRSTP 199
            G AYE    + F  + +         +  E   + G   P+   +++P D  +W+ S  
Sbjct: 150 AGRAYEREGHVFFRGAGVVGASGLDAGRARELAAEFGDD-PDDPLREDPFDVPVWRPSGE 208

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            +P W SPWG GRPGWH EC+AM++  LG+  D+  GG DL FPHH ++ A +  A  + 
Sbjct: 209 RDPAWPSPWGWGRPGWHAECAAMATATLGRGVDVLVGGADLAFPHHAHQAAMAEAASGVA 268

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A   +H G ++ +G KM+KS GN   +++LL       R    PV+RL +L   + +P
Sbjct: 269 PFARSRVHVGAVSQDGAKMAKSTGNLTLVSDLL-------RGTTGPVLRLLVLDRPWSQP 321

Query: 320 IDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYNDLNTVSAIQ 366
            ++  + L  A   L +    +   G       AV+  L +DL+  +A+ 
Sbjct: 322 WEYRPELLETASARLDELFAAAGRPGSSPAASRAVVDRLLDDLDVSAALD 371


>gi|148377308|ref|YP_001256184.1| cysteinyl-tRNA synthetase (cysteine-trnaligase) [Mycoplasma
           agalactiae PG2]
 gi|148291354|emb|CAL58737.1| Cysteinyl tRNA synthetase (Cysteine tRNAligase) [Mycoplasma
           agalactiae PG2]
          Length = 413

 Score =  157 bits (396), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/322 (33%), Positives = 160/322 (49%), Gaps = 31/322 (9%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP+I FD + +  R     K   +V NITD+DDKII +A Q
Sbjct: 2   LKIYVCGPTVYNEPHIGNLRPIITFDFMLKAYREL--NKEFKFVHNITDVDDKIINKAIQ 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ----PRATNHIPQMIYLIQNIIL 141
                     + +  S+    + K   RL  +   +      + T +I  +   ++ +  
Sbjct: 60  ----------MDVKESEVASFYFKSYQRLLRMLNVNTISKIEKVTKNINVINKYVEKLYQ 109

Query: 142 HGHAY-EANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             +AY +AN  + FD   +  NYG  S + ID          K  K    DF LWK ST 
Sbjct: 110 TENAYKDANGNVWFDVLRNKGNYGLVSNQNIDNMVFDENSLLKRFK---GDFALWK-STA 165

Query: 200 MEPGWESPWGRGRPGWHIECSAM-SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +   + S +G GRPGWH ECSA+   H+     DIHGGG+DL FPHHENE  Q     + 
Sbjct: 166 VGIKFRSSFGMGRPGWHTECSALIDKHFGSDGVDIHGGGMDLTFPHHENENIQHYALYQ- 224

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           ++ A  WI  G LNL+  KMSKS GN I   + +   K+G     A +++L         
Sbjct: 225 KQLAKEWIRCGQLNLDCEKMSKSVGNVILAEDFIN--KYG-----AAILKLIFFNAKVSA 277

Query: 319 PIDFTVQRLTEAEILLSKWPQT 340
            I+ T + +   + + +K+ + 
Sbjct: 278 SINITSELIENMKAIENKYKKV 299


>gi|189206896|ref|XP_001939782.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975875|gb|EDU42501.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 797

 Score =  156 bits (395), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 127/242 (52%), Gaps = 19/242 (7%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIF 154
            + +T K   +F +D   L  L P    R T +  +++  +  II +G AY  ++  + F
Sbjct: 235 FTTLTKKYEARFNEDMQNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYSTSDGSVYF 294

Query: 155 DTSSIPNYGS-------FSRRKIDEQKMGTRV---PEKYHKKNPADFILWKRSTPMEPGW 204
           D  +    G+       ++R   + Q  G       +   K+N +DF LWK S P EP W
Sbjct: 295 DIENFEKEGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNDSDFALWKSSKPGEPAW 354

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC---ADRIEKT 261
            SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS      D   + 
Sbjct: 355 NSPWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYWQKDGGAQW 414

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L++ G KMSKS  NF TI E L    +  RS     +R+  L+  + + I+
Sbjct: 415 VNYFLHMGHLSISGSKMSKSLKNFTTIREALSRGDWNARS-----LRIIFLLGGWHDGIE 469

Query: 322 FT 323
            T
Sbjct: 470 IT 471



 Score = 93.6 bits (231), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 3/86 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+K++N+L R   +F  IDP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L +YY
Sbjct: 21  KLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVTNDILRRILAHYY 80

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V +V+NITD+DDKII R RQ+H
Sbjct: 81  GYN-VKFVQNITDVDDKIILRGRQQH 105


>gi|302410221|ref|XP_003002944.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261357968|gb|EEY20396.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 792

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 20/239 (8%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    Q F  D   L  L P    R T ++PQ+   +  I+  G AYE++  + FD ++
Sbjct: 200 LTQSMEQLFFDDMDALNVLRPDVITRVTEYVPQIADFVARIVDKGFAYESDGSVYFDITA 259

Query: 159 IPNYG-SFSR--------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G +++R        + + E   G        K++  DF LWK+S   EP W S WG
Sbjct: 260 FEKAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRSDGDFALWKKSKEGEPYWPSRWG 319

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEKT-ANI 264
            GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS    C  ++ E T    
Sbjct: 320 NGRPGWHIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAYYCEQEKGEHTWVRH 379

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           ++H G L++ G KMSKS  NF TI + L T  +  RS     +R+  L+  + + ++ +
Sbjct: 380 FLHMGHLSISGSKMSKSLKNFQTIQDALAT-NYTSRS-----MRVVFLLGKWNDGVEIS 432



 Score = 50.1 bits (118), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 37/58 (63%), Gaps = 1/58 (1%)

Query: 5  IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          +K++N+L   +   F  I+   +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+
Sbjct: 4  LKVHNSLSPGQPVPFDPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYF 61


>gi|223994283|ref|XP_002286825.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220978140|gb|EED96466.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 807

 Score =  156 bits (394), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 86/242 (35%), Positives = 127/242 (52%), Gaps = 24/242 (9%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
           ++F++D   L    P    R T ++P+++  ++ II  G AY++N  +     +    G 
Sbjct: 252 REFMEDMAALGIREPDILTRVTEYVPKIVAFVETIISKGLAYKSNGSVYLSLDAFQEAG- 310

Query: 165 FSRRKIDEQKMG----------------TRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
            + RK++    G                  V     K+NP DF LWK S   EP WESP+
Sbjct: 311 HNYRKLNPAGPGGAATTAAEMAEGEGALGGVGGDSEKRNPNDFALWKASKAGEPAWESPF 370

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECS ++   LG+  DIH GG DL FPHH+NE+AQS       +  N + H 
Sbjct: 371 GPGRPGWHIECSVVAGDILGERIDIHSGGEDLKFPHHDNELAQSEACFGCNQWVNYFTHT 430

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L++EG KMSKS  NFITI + LE          A  +R+  L+  + +P++++ Q + 
Sbjct: 431 GHLHIEGLKMSKSLKNFITIRQALEHNT-------ARQLRIMFLLQGWDQPMNYSDQTID 483

Query: 329 EA 330
           +A
Sbjct: 484 DA 485



 Score = 73.6 bits (179), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 9/100 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           + NTL  K   F  +   +++ Y CGPTVYD +H+G+AR  + FD++ R++  Y+    V
Sbjct: 44  LRNTLTGKKEPFVPMQSRHVKWYTCGPTVYDSSHVGHARTYLSFDIMRRIMTDYF-HYNV 102

Query: 67  TYVRNITDIDDKIIERARQ--------EHPSIPINDAISI 98
            Y  N TDIDDKII RARQ        E PS+  +  + +
Sbjct: 103 LYQINTTDIDDKIILRARQNELMRLLEEDPSVDFDKLVVL 142


>gi|158312510|ref|YP_001505018.1| cysteine--tRNA ligase [Frankia sp. EAN1pec]
 gi|158107915|gb|ABW10112.1| Cysteine--tRNA ligase [Frankia sp. EAN1pec]
          Length = 371

 Score =  155 bits (393), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 110/346 (31%), Positives = 155/346 (44%), Gaps = 23/346 (6%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T Y   H+G+A   +  D+  R+ R       V   RNITD+DD + + AR+ 
Sbjct: 19  RVYVCGITPYAVTHLGHAATYLWTDLAIRVWRNV--GVPVELARNITDVDDAMFDEARRT 76

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +P +     I S     F +  T L    P H+P A   + ++I L   ++  GHAY
Sbjct: 77  --GLPFDQ----IASLQRFAFDRTMTSLGIRPPDHEPTARAAVTRVIELATALLRAGHAY 130

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMG-TRVPEKYHKKNPADFILWKRSTP--MEPG 203
           E    +   T+         R             P    + +P D  +W+ + P    P 
Sbjct: 131 ERGGSVYARTAEAAERAGLDRAAAIALAAEYNDDPHDPERDDPLDVAVWRAARPDGGYPS 190

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWH EC+AM     G   D+H GG DL +PHH  E   +  A  ++  A 
Sbjct: 191 WPSPWGPGRPGWHAECAAMVLSTFGSSVDLHAGGADLRYPHHAVEALLAERATGVQPFAR 250

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+  G +   G KMSKS GN   +++LL       R  PA  +RL  L+    +  DF 
Sbjct: 251 AWLRPGTVRSGGVKMSKSLGNLTFVDDLLT------RHSPA-AVRLLCLVRPRDDDWDFD 303

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSALYNDLNTVSA 364
                EAE  L      +   G +  A     V +AL +DL+TV A
Sbjct: 304 EAAFDEAEAGLDLLYSAAGRPGAVRGASAVDEVDAALLDDLDTVRA 349


>gi|148272876|ref|YP_001222437.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|310947178|sp|A5CRN7|MSHC_CLAM3 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|147830806|emb|CAN01747.1| cysS2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 426

 Score =  155 bits (392), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 160/344 (46%), Gaps = 37/344 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR--LLRYYYGEK 64
           +++T    +   +      + +YVCG T YD  HIG+A   + FD L R  L R Y    
Sbjct: 21  LFDTSAGSVRPAECTGDGRVGLYVCGITPYDATHIGHASTYLAFDTLQRVWLDRGYD--- 77

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TD+DD ++ERA      +   D    + ++  + F  D   L  L P     
Sbjct: 78  -VAYVQNVTDVDDPLLERATAT--GVDWRD----LAAEQVELFRTDMEALRILPPDSYVG 130

Query: 125 ATNHIPQMIYLIQNIILHGHAYE---------ANNEIIFDTSSIPNYGSFS---RRKIDE 172
            T  + ++   +  ++  G AY             ++ FD +     G ++       D 
Sbjct: 131 VTEVVDEVAAAVAELVRRGTAYPVATPDAAQPGARDLYFDVARAGADGPWALGDESGYDR 190

Query: 173 QKMGTRV------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
             M          PE+  K++P D +LW+     EP W+S  GRGRPGWHIEC+ ++   
Sbjct: 191 DTMAALSAERGGDPERPGKRDPLDPLLWRAERADEPAWDSAVGRGRPGWHIECAVIALRK 250

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L +   + GGG DLIFPHHE   A    A   E  A ++ H+G +  +G KMSKS GN +
Sbjct: 251 LDRPVTVQGGGSDLIFPHHEMS-AGHAAALTGEDFACVYAHSGMVAYQGEKMSKSLGNLV 309

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
            ++  L       R+     IRLA+L  HYR   ++T   L E+
Sbjct: 310 LVSR-LRAAGVDPRA-----IRLALLAQHYRADWEWTDALLAES 347


>gi|197693918|gb|ACH71628.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 128/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ S+    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSVQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVH--NSSIEFSRIALVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M S  L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMISKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693880|gb|ACH71609.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ H+ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEHLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|323651394|gb|ADX97543.1| cysteinyl-tRNA synthetase [Terra1 virus]
          Length = 487

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/320 (33%), Positives = 155/320 (48%), Gaps = 37/320 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           I MYVCGPTVY+ +HIG+AR  ++ D++ R +     +     V NITDIDDKII+ A  
Sbjct: 5   INMYVCGPTVYNDSHIGHARIYVMVDIINRTMTNILNQDT-HLVMNITDIDDKIIKAAND 63

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           +  S         ++ K   +F +   +L    P    R +  I  +I  IQ II +  A
Sbjct: 64  QLVSWKT------LSKKYEDKFFESMAKLGVAKPDVVIRVSESIDDIIKYIQQIINNDFA 117

Query: 146 Y-EANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEKY--HKKNPADFILWKRSTPM 200
           Y  ++  + FDT    N G      ID  EQ   +++  +    K++  DF LWK     
Sbjct: 118 YVTSDGSVYFDTIKYVNAGYILDCDIDIEEQTYESQIASEIINEKRHIKDFALWKSRADY 177

Query: 201 EPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           + G+   +          G PGWHIECSAM    +G   +IH GG+DL FPHH NE  Q+
Sbjct: 178 DVGFFVEFIFNNAIIKTYGVPGWHIECSAMIERTIGDSVNIHFGGIDLKFPHHHNECLQA 237

Query: 253 CC----------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
                           EK    ++H G L +EG+KMSKS  NF TI+E+LET       W
Sbjct: 238 NAYYHPKYKPNTNINTEKWTQEFMHVGHLCVEGQKMSKSLKNFSTIDEVLETINSNEMRW 297

Query: 303 PAPVIRLAMLMTHYREPIDF 322
                    +  ++R+P++F
Sbjct: 298 -------MFMQNNWRKPMEF 310


>gi|197693892|gb|ACH71615.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  155 bits (391), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ H+ 
Sbjct: 1   DFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEHLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGTDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|308505978|ref|XP_003115172.1| CRE-CARS-1 protein [Caenorhabditis remanei]
 gi|308259354|gb|EFP03307.1| CRE-CARS-1 protein [Caenorhabditis remanei]
          Length = 770

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 126/245 (51%), Gaps = 26/245 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-- 161
           ++F+ D  RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +     
Sbjct: 223 KEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIINNGYAYAAEDGSVYFDTKAFEQNP 282

Query: 162 -----------YGSFSRRKIDEQKMG----TRVPEKYH-KKNPADFILWKRSTPMEPGWE 205
                      YG  S + +   + G    +   E+   K+NP DF LWK S   EP W 
Sbjct: 283 KHFYAKLVPEAYGDDSEQLLKNMREGEGELSMSDERLKSKRNPTDFALWKSSKDGEPFWS 342

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           S WG GRPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N +
Sbjct: 343 SEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYF 402

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G L ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++  
Sbjct: 403 LHCGTLRIQGMKMSKSLKNFITIRKALE-------DYTPRQLRLLFLMHNWADVLDYSSS 455

Query: 326 RLTEA 330
            +  A
Sbjct: 456 TMERA 460



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+G 
Sbjct: 29  QLTVYNSLTRQKEIFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYFGY 88

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V ++ NITD+DDKII+RARQ H
Sbjct: 89  D-VEFIMNITDVDDKIIKRARQSH 111


>gi|197693882|gb|ACH71610.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  154 bits (390), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ H+ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEHLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|171690590|ref|XP_001910220.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945243|emb|CAP71354.1| unnamed protein product [Podospora anserina S mat+]
          Length = 780

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/239 (37%), Positives = 129/239 (53%), Gaps = 26/239 (10%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           ++ K  ++F +D   L  L P    R T ++ Q++  ++ I+ +G  Y   +  + FD  
Sbjct: 222 LSQKFERRFFEDMDALNVLPPDQLTRVTEYVRQIVDFVEKIVANGFGYATPDGSVYFDID 281

Query: 158 SIPNYG-SFSR----RKIDEQKM----GTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           S    G S+SR     K D   +    G+       K++P  F LWK S P EP W+SPW
Sbjct: 282 SFEKAGHSYSRLEPWNKNDPALLADGEGSLSKGASMKRSPNHFALWKASKPGEPAWDSPW 341

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEKTANI 264
           GRGRPGWHIECSAM+S  +GK  DIH GG+DL FPHH+NE+AQS       D   + AN 
Sbjct: 342 GRGRPGWHIECSAMASEAIGKTMDIHSGGVDLRFPHHDNELAQSEAYWSTPDCHVQWANY 401

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +IH G       ++SKS  N+ TI  +L  K +  RS     +R+  L+  +++ I+ T
Sbjct: 402 FIHMG-------QLSKSLKNYTTIRSVLSEKDWTARS-----LRICFLLMPWQDGIEVT 448



 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 39/85 (45%), Positives = 60/85 (70%), Gaps = 3/85 (3%)

Query: 5  IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
          +KIYN+L R   +F  +DP+   +  Y CGPTVY+ AH+G+A+  +  D++ R++R Y+G
Sbjct: 14 LKIYNSLTRTKNDFIPVDPTGEVVTWYACGPTVYEDAHLGHAKNYVSTDIIRRIMRDYFG 73

Query: 63 EKCVTYVRNITDIDDKIIERARQEH 87
           + V +V N TDIDDKII +AR++H
Sbjct: 74 FR-VKFVMNTTDIDDKIILQARRQH 97


>gi|197693912|gb|ACH71625.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  154 bits (389), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E  SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|317035121|ref|XP_001401149.2| cysteinyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 804

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 133/255 (52%), Gaps = 26/255 (10%)

Query: 86  EHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           E  +IP  DA  I   +T K    F++D   L  L P    R T +  Q+   ++ I+ +
Sbjct: 228 EGSTIP-GDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRVTEYGQQIADFVEKIVAN 286

Query: 143 GHAY-EANNEIIFDTSSIPNYGSFSRRKI-----------DEQKMGTRVPEKYHKKNPAD 190
              Y  ++  + FD  +    G+   R             D +   +R  EK   K+  D
Sbjct: 287 KFGYVTSDGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGEGALSRATEK---KSSDD 343

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S P EP W S WG+GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 344 FALWKASRPGEPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSGGIDLAFPHHDNELA 403

Query: 251 QSCC--ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           QS     +  ++  N ++H G L+++G KMSKS  NF T+ + LE   +  RS     +R
Sbjct: 404 QSEAYWCEHKQQWVNYFLHMGHLSIQGSKMSKSLKNFTTVKDALERGDYTPRS-----LR 458

Query: 309 LAMLMTHYREPIDFT 323
           +  L+  +R+ ++ T
Sbjct: 459 IVFLLGGWRDGVEIT 473



 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 84/156 (53%), Gaps = 19/156 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L R  T F  +DP    ++ Y CGPTVYD AH+G+AR  +  D+L R+LR Y+ 
Sbjct: 23  LKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYF- 81

Query: 63  EKCVTYVRNITDIDDKIIERARQ---------EHPSIPINDAISIITSKNTQQFVKDTTR 113
           +  V +V NITD+DDKII R RQ         EHP++  +  +     K    ++K    
Sbjct: 82  KFDVEFVMNITDVDDKIILRGRQQHLFNKYIAEHPTVTPD--VLETARKAYSAYIK--KN 137

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
           L  + P  +P       Q +Y    ++L G A EA+
Sbjct: 138 LPLVDPDTEPENFVAEAQKVY---GVVLQGGALEAD 170


>gi|169615663|ref|XP_001801247.1| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
 gi|160703013|gb|EAT81491.2| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
          Length = 837

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 129/243 (53%), Gaps = 25/243 (10%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTS 157
           +T K   +F +D   L  L P    R T +  Q++  ++ I+ +G AY  ++  + FD  
Sbjct: 275 LTQKYEARFNEDMRSLNVLDPNVVTRVTEYGDQIVTFVEKIVANGFAYSTSDGSVYFDIE 334

Query: 158 S---IP----------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           +   +P          N G  S +   E  +  +  +   K++ +DF LWK S P EP W
Sbjct: 335 AFEKVPGNHYARLEPWNRGDKSLQADGEGALSQQ--KTSEKRSESDFALWKSSKPGEPAW 392

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS----CCADRIEK 260
           +SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS       +   +
Sbjct: 393 KSPWGPGRPGWHIECSVMASDVLGEQMDIHSGGIDLCFPHHDNELAQSEAHWSSKEGGHQ 452

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
             N ++H G L++ G KMSKS  NF TI E L    +  RS     +R+  L+  + + I
Sbjct: 453 WVNYFLHMGHLSISGSKMSKSLKNFTTIREALARGDWNARS-----LRIIFLLGGWHDGI 507

Query: 321 DFT 323
           + T
Sbjct: 508 EIT 510



 Score = 89.0 bits (219), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 60/86 (69%), Gaps = 3/86 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+K++N+L R   EF  +DP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L  Y+
Sbjct: 58  KLKVWNSLTRSKNEFVPVDPEGKVVKWYSCGPTVYDDAHLGHARNYVTIDILRRVLAGYF 117

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   + +V+NITD+DDKII R RQ++
Sbjct: 118 GYN-LRFVQNITDVDDKIILRGRQQY 142


>gi|197693920|gb|ACH71629.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 127/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|330924798|ref|XP_003300783.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
 gi|311324916|gb|EFQ91133.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
          Length = 798

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 127/245 (51%), Gaps = 24/245 (9%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIF 154
            + +T K   +F +D   L  L P    R T +  +++  +  II +G AY  ++  + F
Sbjct: 235 FTTLTKKYEARFNEDMRNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYSTSDGSVYF 294

Query: 155 DTSSIP-------------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
           D  +               N G  + +   E  + +   +   K+N +DF LWK S P E
Sbjct: 295 DIENFEKKEGNHYARLEPWNRGDTNLQADGEGALSS--VKTSEKRNDSDFALWKSSKPGE 352

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC---ADRI 258
           P W+SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS      D  
Sbjct: 353 PAWDSPWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYWQKDGG 412

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
            +  N ++H G L++ G KMSKS  NF TI E L    +  RS     +R+  L+  + +
Sbjct: 413 AQWVNYFLHMGHLSISGSKMSKSLKNFTTIREALSRGDWNARS-----LRIIFLLGGWHD 467

Query: 319 PIDFT 323
            I+ T
Sbjct: 468 GIEIT 472



 Score = 93.2 bits (230), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 44/86 (51%), Positives = 61/86 (70%), Gaps = 3/86 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+K++N+L R   +F  IDP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L +YY
Sbjct: 21  KLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVTNDILRRILAHYY 80

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V +V+NITD+DDKII R RQ+H
Sbjct: 81  GYN-VKFVQNITDVDDKIILRGRQQH 105


>gi|197693944|gb|ACH71641.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693930|gb|ACH71634.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 127/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSMH--NSSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGSDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|220912666|ref|YP_002487975.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|310947172|sp|B8H8K8|MSHC_ARTCA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|219859544|gb|ACL39886.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Arthrobacter chlorophenolicus A6]
          Length = 410

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/355 (31%), Positives = 167/355 (47%), Gaps = 40/355 (11%)

Query: 5   IKIYNTLERKITEFQAID-PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           I++++T        ++ D PS   MYVCG T YD  H+G+A   + FD+L R  R     
Sbjct: 4   IRLFDTAAGHEVLLESGDRPS---MYVCGITPYDATHMGHAASYVAFDLLNRAWRD--AG 58

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YV+N+TD+DD ++ERA         N     +       F  D   L  L+P H  
Sbjct: 59  KDVDYVQNVTDVDDPLLERA------TATNVDWRDLAQSQIDLFQTDMEALNVLSPDHYV 112

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDT------SSIPNYGSF-SRRK 169
            A   I  ++  ++ ++  G AY       E + ++ +D       S  P+  S  S   
Sbjct: 113 GAVESISLIVPQVERLVSQGLAYTVPGTNGEPDGDVYYDVEAAGKQSVAPDAWSLGSISG 172

Query: 170 IDEQKMGTRV------PEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAM 222
           + E +M          P +  K+   D +LW+ +   EP W  +  G GRPGWHIEC+ +
Sbjct: 173 LSESEMLELFAERGGDPGRSGKRQALDPLLWRVARDGEPSWPGASLGDGRPGWHIECTVI 232

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +  YL   F + GGG DLIFPHHE     +     +   A  + H G + L+G KMSKS 
Sbjct: 233 AQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLAGV-PLARHYAHAGMVGLDGEKMSKSK 291

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           GN + +++L    +      PA  IRLA+L  HYR    +T +    A+  L+ W
Sbjct: 292 GNLVLVSKLRAAGEN-----PA-AIRLAILAHHYRSDWSWTDEGFAAAKADLAAW 340


>gi|197693894|gb|ACH71616.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  SMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGTDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|134081832|emb|CAK42087.1| unnamed protein product [Aspergillus niger]
          Length = 729

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 133/255 (52%), Gaps = 26/255 (10%)

Query: 86  EHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           E  +IP  DA  I   +T K    F++D   L  L P    R T +  Q+   ++ I+ +
Sbjct: 199 EGSTIP-GDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRVTEYGQQIADFVEKIVAN 257

Query: 143 GHAY-EANNEIIFDTSSIPNYGSFSRRK-----------IDEQKMGTRVPEKYHKKNPAD 190
              Y  ++  + FD  +    G+   R             D +   +R  EK   K+  D
Sbjct: 258 KFGYVTSDGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGEGALSRATEK---KSSDD 314

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S P EP W S WG+GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 315 FALWKASRPGEPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSGGIDLAFPHHDNELA 374

Query: 251 QSCC--ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           QS     +  ++  N ++H G L+++G KMSKS  NF T+ + LE   +  RS     +R
Sbjct: 375 QSEAYWCEHKQQWVNYFLHMGHLSIQGSKMSKSLKNFTTVKDALERGDYTPRS-----LR 429

Query: 309 LAMLMTHYREPIDFT 323
           +  L+  +R+ ++ T
Sbjct: 430 IVFLLGGWRDGVEIT 444



 Score = 87.4 bits (215), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 42/85 (49%), Positives = 59/85 (69%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L R  T F  +DP    ++ Y CGPTVYD AH+G+AR  +  D+L R+LR Y+ 
Sbjct: 23  LKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDYF- 81

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
           +  V +V NITD+DDKII R RQ+H
Sbjct: 82  KFDVEFVMNITDVDDKIILRGRQQH 106


>gi|197693884|gb|ACH71611.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  154 bits (388), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693948|gb|ACH71643.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693896|gb|ACH71617.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 125/225 (55%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI     I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSGIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|296418824|ref|XP_002839025.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635019|emb|CAZ83216.1| unnamed protein product [Tuber melanosporum]
          Length = 718

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 125/252 (49%), Gaps = 42/252 (16%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           +  S +TS     F +D   L  L PT   R +  IP+ +  ++ ++  G AY       
Sbjct: 194 EVFSKLTSYWENHFNEDMATLNVLPPTTVTRVSEFIPENVAFVKKLVDRGFAYPTA---- 249

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR---STPMEPGWESPWGR 210
            D SS+   G  S                  KK P DF LWK      P EP W+SPWG+
Sbjct: 250 -DGSSLIADGEAS------------------KKTPQDFALWKAFKAEKPGEPSWDSPWGK 290

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS------CC-----ADRIE 259
           GRPGWHIECS M S  LG   DIH GG+DL FPHH+NEIAQS      CC     AD   
Sbjct: 291 GRPGWHIECSVMCSEVLGGQVDIHSGGIDLAFPHHDNEIAQSEAYWDGCCDTPKTADGKH 350

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
           +  N ++H G L++ G KMSKS  NF++I + L     GG  W    +R+  L+  +R+ 
Sbjct: 351 QWVNYFLHMGHLSIHGSKMSKSLKNFVSIRDALTR---GG--WTPRGLRVVFLLGGWRDG 405

Query: 320 IDFTVQRLTEAE 331
           I+     L EA+
Sbjct: 406 IEVREGVLMEAK 417



 Score = 93.6 bits (231), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 46/85 (54%), Positives = 60/85 (70%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRM--YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + IYN+L R+   F  IDPS  R+  Y CGPTVYD  H+G+AR  +  DVL R+LR Y+G
Sbjct: 25  LHIYNSLTREKNVFVPIDPSGRRITWYCCGPTVYDAGHLGHARNYVTTDVLRRILRDYFG 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
              V +V+N+TD+DDKII RARQ+H
Sbjct: 85  FD-VQFVQNVTDVDDKIILRARQQH 108


>gi|302508593|ref|XP_003016257.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
 gi|291179826|gb|EFE35612.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
          Length = 1165

 Score =  153 bits (387), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/242 (36%), Positives = 124/242 (51%), Gaps = 15/242 (6%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTS 157
           +T     +F++D   L  L P    RAT++IP++I  I+ II +G AY  ++  I F+  
Sbjct: 63  LTRNFETRFLEDMRFLNVLDPDELTRATSYIPEIIQFIEKIIDNGFAYSTSDGSIYFNID 122

Query: 158 SIPNYGS-------FSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
              N G+       ++R  + +     G+       K +  DF LW  S   EP W  PW
Sbjct: 123 KFANAGNHYAKLEPWNRHNKHLQRDGEGSLSKNTTAKASKNDFALWNASRAGEPSWPGPW 182

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+ Q        +  N ++H 
Sbjct: 183 GNGRPGWHIECSAMASATLGSQIDIHSGGIDLAFPHHDNELPQGEAYWGETQWVNYFLHM 242

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L++ G KMSKS  NF  I   L    +  RS     +R+  L+  +RE I+ T   + 
Sbjct: 243 GHLSIHGSKMSKSLKNFTAIGGALAKGTWTSRS-----VRIVFLLGRWREGIEITTDMVN 297

Query: 329 EA 330
            A
Sbjct: 298 AA 299


>gi|197693954|gb|ACH71646.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693916|gb|ACH71627.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 127/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVSMIKTLLEKNIAYQISNGDIYLDTSKDKDYGSLSVH--NSSIEFSRIALVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693902|gb|ACH71620.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693956|gb|ACH71647.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693888|gb|ACH71613.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (386), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN-SSVEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|195374027|ref|XP_002046047.1| GM15123 [Drosophila sechellia]
 gi|194123235|gb|EDW45278.1| GM15123 [Drosophila sechellia]
          Length = 256

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 117/214 (54%), Gaps = 23/214 (10%)

Query: 139 IILHGHAYEANNEIIFDTSS------------IPN-YGSFSRRKIDEQKMGTRVPEKYHK 185
           II +G AY ANN + FD +             +P  YG     +  E  +         K
Sbjct: 1   IIDNGLAYAANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEK 60

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++  DF LWK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH
Sbjct: 61  RSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHH 120

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           +NE+AQS  A    +    ++H G L + G KMSKS  NF+TI E L+          A 
Sbjct: 121 DNELAQSEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEALKKH-------SAT 173

Query: 306 VIRLAMLMTHYREPIDF---TVQRLTEAEILLSK 336
            +RLA L+  +++ +D+   T++  T+ E  L++
Sbjct: 174 QLRLAFLLHSWKDTLDYSENTMEMATQYEKFLNE 207


>gi|197693924|gb|ACH71631.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E  SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKESKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  SMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN-SSVEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693940|gb|ACH71639.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  153 bits (386), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 125/225 (55%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E  SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|311113625|ref|YP_003984847.1| cysteinyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
 gi|310945119|gb|ADP41413.1| cysteinyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
          Length = 438

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 179/405 (44%), Gaps = 57/405 (14%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T    + + Q  +P +  +YVCG T YD  H+G+A   + FDVL R  R       
Sbjct: 20  QIFDTSTGTVVQLQ--EPQHAGLYVCGITPYDATHMGHASTYVAFDVLNRAWRD--AGVT 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA               +  + T+ F  D   L  L P H    
Sbjct: 76  VTYVQNVTDVDDPLLERA------TATGVDWQELAEEQTELFRTDMEALHVLPPDHYVGV 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPNY----------- 162
              I  +  +I++++    AY                +I  D  ++              
Sbjct: 130 VESIQWLFPVIEDLVERSLAYRVAGYVDEKGVQHPGGDIYLDLKAVQALPQNEDGYSWTP 189

Query: 163 GSFSRRKIDE------QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGW 215
           G  S    DE      ++ G   PE+  K++P D +LW+     EP W++   G GRPGW
Sbjct: 190 GEVSHMSRDEMLDIFSERGGD--PERSGKRDPLDPLLWRIKREGEPSWDAGSLGEGRPGW 247

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIEC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G
Sbjct: 248 HIECTMIARKFIDGPLTVQAGGSDLKFPHHDLGAGHSWAVSN-RPHALHYAHTGMVGLDG 306

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN + +++L    +  G       IRLA++  HYRE   +T + L +A+  L 
Sbjct: 307 HKMSKSRGNLVLVSKL----RAAGVD--PNTIRLAIMDHHYREDWFWTDEDLKKAQARLD 360

Query: 336 KWPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLA 372
            + Q   S    D +        V   L +DL T  A+ AL   A
Sbjct: 361 LYRQAVESANGTDSSAAEQALEKVREYLADDLKTSGALMALDAWA 405


>gi|197693950|gb|ACH71644.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (385), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 125/225 (55%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E  SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693914|gb|ACH71626.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693960|gb|ACH71649.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 127/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693928|gb|ACH71633.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+++I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVHMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCTFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693890|gb|ACH71614.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (385), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 125/225 (55%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E  SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN-SSVEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693908|gb|ACH71623.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (385), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 130/227 (57%), Gaps = 20/227 (8%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKN 187
            M+ +I+ ++    AY  +N +I  DTS   +YGS S     I+  ++G  V EK  ++ 
Sbjct: 55  AMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHNSSIEFSRIGL-VQEKRLEQ- 112

Query: 188 PADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLI 241
             DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+
Sbjct: 113 --DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLL 170

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 171 FPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693898|gb|ACH71618.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 130/227 (57%), Gaps = 20/227 (8%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKN 187
            M+ +I+ ++    AY  +N +I  DTS   +YGS S     I+  ++G  V EK  ++ 
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHNSSIEFGRIGL-VQEKRLEQ- 112

Query: 188 PADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLI 241
             DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+
Sbjct: 113 --DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGGADLL 170

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 171 FPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693952|gb|ACH71645.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 127/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693900|gb|ACH71619.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 127/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693904|gb|ACH71621.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSMHN-SSVEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|268565691|ref|XP_002639522.1| Hypothetical protein CBG04128 [Caenorhabditis briggsae]
 gi|187036303|emb|CAP24909.1| CBR-CARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 584

 Score =  152 bits (384), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 125/245 (51%), Gaps = 26/245 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-- 161
           ++F+ D  RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +     
Sbjct: 222 KEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIINNGYAYAAEDGSVYFDTKAFEQNP 281

Query: 162 -----------YGSFSRRKIDEQKMG----TRVPEKYH-KKNPADFILWKRSTPMEPGWE 205
                      YG  S   +   + G    +   E+   K+NP DF LWK S   EP W 
Sbjct: 282 KHFYAKLVPEAYGDDSELLLKNMREGEGELSMSDERLKSKRNPTDFALWKSSKDGEPFWP 341

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           S WG GRPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N +
Sbjct: 342 SEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYF 401

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G L ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++  
Sbjct: 402 LHCGTLRIQGMKMSKSLKNFITIRKALE-------DYTPRQLRLLFLMHNWADVLDYSSS 454

Query: 326 RLTEA 330
            +  A
Sbjct: 455 TMERA 459



 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+G 
Sbjct: 28  QLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYFGY 87

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V ++ NITD+DDKII+RARQ H
Sbjct: 88  D-VEFIMNITDVDDKIIKRARQSH 110


>gi|197693932|gb|ACH71635.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 125/225 (55%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I        + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKENKSIQELSSIYI------GSYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693878|gb|ACH71608.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693934|gb|ACH71636.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693936|gb|ACH71637.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693938|gb|ACH71638.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693942|gb|ACH71640.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 20/227 (8%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKN 187
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK  ++ 
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ- 112

Query: 188 PADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLI 241
             DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+
Sbjct: 113 --DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLL 170

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 171 FPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|332841659|ref|XP_509736.3| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial [Pan
           troglodytes]
          Length = 591

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 165/355 (46%), Gaps = 59/355 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 52  VQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCN 111

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R
Sbjct: 112 IVM-VMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLR 164

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
            T +IPQ+I  I+ II  G+AY  A   + FD  S         R     K+   VP   
Sbjct: 165 VTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKS---------RGDKYGKLVGVVPGPV 215

Query: 182 -----KYHKKNPADFILWKRST--------------------PMEP--GWESPWGRGR-- 212
                  H K    +I++ RS+                     M P  GW      GR  
Sbjct: 216 GEPGFSAHLKASYTYIIFSRSSVFCCYRVSEKRRLLRRDTAWGMLPTGGWRGFHQGGRLD 275

Query: 213 -PGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
            PG   + S      L G   DIH GG+DL FPHHENEIAQ     + E+  N ++H+G 
Sbjct: 276 FPGGGDQLSFCGGGMLFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGH 335

Query: 271 LNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           L+ +G+  KMSKS  N+ITI + L+T       +   V R   L + YR  ID++
Sbjct: 336 LHAKGKEEKMSKSLKNYITIKDFLKT-------FSPDVFRFFCLRSSYRSAIDYS 383


>gi|197693906|gb|ACH71622.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693910|gb|ACH71624.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (383), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 126/225 (56%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     K+   
Sbjct: 55  AMVSMIKTLLEKNIAYRISNGDIYLDTSKDKDYGSLSVH--NSSIEFSRIALVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|197693886|gb|ACH71612.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  152 bits (383), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 20/227 (8%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKN 187
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK  ++ 
Sbjct: 55  AMVSMIKTLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ- 112

Query: 188 PADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLI 241
             DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+
Sbjct: 113 --DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLL 170

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 171 FPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|17509795|ref|NP_491013.1| Cysteinyl tRNA Synthetase family member (crs-1) [Caenorhabditis
           elegans]
 gi|3319446|gb|AAC64633.1| Cysteinyl trna synthetase protein 1, isoform a, partially confirmed
           by transcript evidence [Caenorhabditis elegans]
          Length = 909

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 124/245 (50%), Gaps = 26/245 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-- 161
           ++F+ D  RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +     
Sbjct: 377 KEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIISNGYAYAAEDGSVYFDTKAFEQNP 436

Query: 162 -----------YGSFSRR-----KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
                      YG  S +     K  E ++         K++P DF LWK S   EP W 
Sbjct: 437 KHFYAKLVPEAYGEDSEQLLKNMKESEGELSMSDDRLKSKRSPNDFALWKSSKDGEPFWP 496

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           S WG GRPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N +
Sbjct: 497 SEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYF 556

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G L ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++  
Sbjct: 557 LHCGTLRIQGMKMSKSLKNFITIRKALE-------DYTPRQLRLLFLMHNWADVLDYSSS 609

Query: 326 RLTEA 330
            +  A
Sbjct: 610 TMERA 614



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+G 
Sbjct: 183 QLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYFGY 242

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V ++ NITD+DDKII+RARQ H
Sbjct: 243 D-VEFIMNITDVDDKIIKRARQSH 265


>gi|197693922|gb|ACH71630.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693926|gb|ACH71632.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 131/227 (57%), Gaps = 20/227 (8%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKN 187
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK  ++ 
Sbjct: 55  AMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ- 112

Query: 188 PADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLI 241
             DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+
Sbjct: 113 --DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLL 170

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 171 FPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|17509797|ref|NP_491014.1| Cysteinyl tRNA Synthetase family member (crs-1) [Caenorhabditis
           elegans]
 gi|14574274|gb|AAK68426.1|AF077541_9 Cysteinyl trna synthetase protein 1, isoform b, partially confirmed
           by transcript evidence [Caenorhabditis elegans]
          Length = 908

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/245 (36%), Positives = 124/245 (50%), Gaps = 26/245 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-- 161
           ++F+ D  RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +     
Sbjct: 376 KEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIISNGYAYAAEDGSVYFDTKAFEQNP 435

Query: 162 -----------YGSFSRR-----KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
                      YG  S +     K  E ++         K++P DF LWK S   EP W 
Sbjct: 436 KHFYAKLVPEAYGEDSEQLLKNMKESEGELSMSDDRLKSKRSPNDFALWKSSKDGEPFWP 495

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           S WG GRPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N +
Sbjct: 496 SEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYF 555

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G L ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++  
Sbjct: 556 LHCGTLRIQGMKMSKSLKNFITIRKALE-------DYTPRQLRLLFLMHNWADVLDYSSS 608

Query: 326 RLTEA 330
            +  A
Sbjct: 609 TMERA 613



 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+G 
Sbjct: 182 QLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYFGY 241

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V ++ NITD+DDKII+RARQ H
Sbjct: 242 D-VEFIMNITDVDDKIIKRARQSH 264


>gi|197693946|gb|ACH71642.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  151 bits (382), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 125/225 (55%), Gaps = 16/225 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I        + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKENKSIQELSSIYI------GSYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|294880574|ref|XP_002769069.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239872171|gb|EER01787.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 769

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/212 (41%), Positives = 114/212 (53%), Gaps = 30/212 (14%)

Query: 140 ILHGHAYEANNEIIFDTSSIPNYG--------SFSRRKID------EQKMGTRV------ 179
           +  G AYE+   + FDT     +G        S  +   D      E  + T        
Sbjct: 252 VQRGIAYESKGSVYFDTQRYKTHGFNYPKLVPSAGKGATDAEIAEGEGALSTNATGGDFG 311

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            EK H+    DF LWK S   EP WESPWG GRPGWHIECS M+S  LG   DIHGGG D
Sbjct: 312 SEKRHRN---DFALWKSSKRGEPSWESPWGLGRPGWHIECSVMASEVLGAHIDIHGGGSD 368

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH+NEIAQS       +  N ++H G L+++G KMSKS  NFITI + L+      
Sbjct: 369 LKFPHHDNEIAQSEAYHFNAQWVNYFLHAGHLHIKGLKMSKSLKNFITIRQALQ------ 422

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
            S+ A  +R+  L+  + +PI+F+ Q + EA+
Sbjct: 423 -SYTARQLRIMFLLQQWDKPINFSDQTIAEAK 453



 Score = 83.6 bits (205), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 1/81 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L      F  I+   +RMYVCGPTVYD AH+G+AR  + FD++ R+L  Y+  +
Sbjct: 23  LRVHNSLTDTKVPFVPINGKEVRMYVCGPTVYDSAHMGHARAYLTFDIIRRILEDYFQYR 82

Query: 65  CVTYVRNITDIDDKIIERARQ 85
            V Y  NITDIDDKII +AR+
Sbjct: 83  -VFYQMNITDIDDKIILKARK 102


>gi|300741532|ref|ZP_07071553.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia dentocariosa M567]
 gi|300380717|gb|EFJ77279.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia dentocariosa M567]
          Length = 438

 Score =  150 bits (380), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 179/405 (44%), Gaps = 57/405 (14%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T    + + Q  +P +  +YVCG T YD  H+G+A   + FDVL R  R       
Sbjct: 20  QIFDTSTGTVVQLQ--EPQHAGLYVCGITPYDATHMGHASTYVAFDVLNRAWRD--AGVN 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA               +  + T+ F  D   L  L P H    
Sbjct: 76  VTYVQNVTDVDDPLLERA------TATGVDWQELAEEQTELFRTDMEALHVLPPEHYVGV 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPNY----------- 162
              I  +  +I++++    AY              + +I  D  ++              
Sbjct: 130 VESIQWLFPVIEDLVERSLAYRVAGYVDEKGVQHPDGDIYLDLKAVQALPQNEDGYSWTP 189

Query: 163 GSFSRRKIDE------QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGW 215
           G  S    DE      ++ G   PE+  K++P D +LW+     EP W++   G GRPGW
Sbjct: 190 GEVSHMSRDEMLDIFSERGGD--PERSGKRDPLDPLLWRIKREGEPSWDAGSLGEGRPGW 247

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIEC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G
Sbjct: 248 HIECTMIARKFIDGPLTVQAGGSDLKFPHHDLGAGHSWAVSN-RPHALHYAHTGMVGLDG 306

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN + +++L    +  G       IRL ++  HYRE   +T + L +A+  L 
Sbjct: 307 HKMSKSRGNLVLVSKL----RAAGVD--PNTIRLTIMDHHYREDWFWTDEDLKKAQARLD 360

Query: 336 KWPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLA 372
            + Q   S    D +        V   L +DL T  A+ AL   A
Sbjct: 361 LYRQAVESANGTDSSAAEQALEKVREYLADDLKTSGALMALDAWA 405


>gi|28493283|ref|NP_787444.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572606|ref|NP_789386.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|61216627|sp|Q83GH3|SYC2_TROWT RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|61216629|sp|Q83HQ8|SYC2_TROW8 RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|28410738|emb|CAD67124.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476324|gb|AAO44413.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 450

 Score =  150 bits (380), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/384 (29%), Positives = 189/384 (49%), Gaps = 27/384 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            +++++  R I +   ++   +R+YVCG T Y   H+G+A   + FD L+RL       +
Sbjct: 4   FEVFDSRTRSIVK---LEDCLLRLYVCGITPYKSTHLGHAFTYVGFDTLFRLA--LDSGR 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NI+DID+ + + A  E   I   D    +    T++F +D   L CL P +   
Sbjct: 59  DVLYIQNISDIDEPLFQYA--EKVGIHYKD----LARTQTKRFFEDMHTLECLPPGYVIP 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  +  +   I+ +I    AY+  N  ++  S++ + G       D +   + + E   
Sbjct: 113 VSKVLDGIKTGIEGLISRNMAYKLPNGDVYFDSTLTDPGKMF--CFDRKTAMSLMLETDT 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIF 242
            KNP D +LW R    EP WE+ +G GRP WHI C+ +S+       V  I+GGG DL F
Sbjct: 171 GKNPFDPLLW-RGRGAEPQWEASFGAGRPAWHISCAVLSNLQTQYENVLHIYGGGRDLAF 229

Query: 243 PHHE--NEIAQSCCADRIEK----TANIWIHNGFLNLEGRKMSKSNGNFITINELLE-TK 295
           PHHE  N +++   A +  K      ++++H G ++  G KMSKS GN + I++L E  +
Sbjct: 230 PHHEFTNVLSKLIRAPKDNKQQDTVQDVFMHTGLVSYMGDKMSKSKGNLVFISQLREQCE 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
           K G       VIRLA+L  HYRE  ++  + L  A      W +++  + I    + S  
Sbjct: 290 KIGLHH---SVIRLALLQRHYREDWEWQDECLDRAASRFRLW-KSALQEYIGAKGIRSTA 345

Query: 356 YNDLNTVSAIQALHKLARESTKNH 379
             +  T  A + +H    +S  +H
Sbjct: 346 DQNKGTQGAWERIHGGVFDSNFDH 369


>gi|309813142|ref|ZP_07706866.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Dermacoccus sp. Ellin185]
 gi|308432946|gb|EFP56854.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Dermacoccus sp. Ellin185]
          Length = 420

 Score =  150 bits (378), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/387 (29%), Positives = 184/387 (47%), Gaps = 41/387 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T   +I      + +   +YVCG T YD  H+G+A   + FD+  R++     + 
Sbjct: 22  VRLFDTAAGEIVPIDLGEQAG--LYVCGITPYDATHLGHAATYVTFDIAQRVMIDAGAQ- 78

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N+TD+DD ++ERA ++       D   + TS+  + F  D   L  + P H   
Sbjct: 79  -VTYVQNVTDVDDPLLERAARDG-----VDWRELATSE-IELFHGDMEALGVIPPQHYVG 131

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-----------NEIIFDTSSIPNYGSFSRRKIDEQ 173
               +      +  ++  G AY  +            ++  D +  P +GS S     EQ
Sbjct: 132 VVESMTLHSTNVARLLERGLAYTVDVPAAENAAAGAKDVYLDLAQQPTFGSVSHWD-REQ 190

Query: 174 KMGTRV-----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG--WHIECSAMSSHY 226
            M         PE+  K++  D +LW+     EP W+   G GR    WHIEC++++  +
Sbjct: 191 MMAVFADRGGDPEREGKRDVFDPLLWRAEREGEPAWDGGPGVGRGRPGWHIECTSIALEH 250

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  F + GGG DLIFPHHE    Q+         A+ + H G +  +G KMSKS GN +
Sbjct: 251 LGNGFTLQGGGTDLIFPHHEMSAVQANALTGQPPFAHHYAHQGMVGYDGEKMSKSKGNLV 310

Query: 287 TINELLETKKFGGRSWPAPV-IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
            ++ L        R    P+ IRL +L  HYR   ++T   L  A+  L+ W +   + G
Sbjct: 311 KVSVLR-------REGVDPMAIRLVLLDQHYRTDWEYTDALLDAAKERLATWRRAIEADG 363

Query: 346 I----IDPAVLSALYNDLNTVSAIQAL 368
           +       AV  AL +DL+T +A+ A+
Sbjct: 364 VDATPTIEAVRRALRSDLDTPAALAAI 390


>gi|148690119|gb|EDL22066.1| mCG11180, isoform CRA_b [Mus musculus]
          Length = 270

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 121/222 (54%), Gaps = 15/222 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYL 148

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 149 RVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAEPG 204

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
              K++ +DF LWK + P E  W SPWG GRPGWHIECS M+
Sbjct: 205 DSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMA 246


>gi|12862152|dbj|BAB32367.1| unnamed protein product [Mus musculus]
          Length = 276

 Score =  150 bits (378), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 121/222 (54%), Gaps = 15/222 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 43  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 100

Query: 65  C-VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           C V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   
Sbjct: 101 CNVVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYL 154

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  P 
Sbjct: 155 RVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAEPG 210

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
              K++ +DF LWK + P E  W SPWG GRPGWHIECS M+
Sbjct: 211 DSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMA 252


>gi|116751465|ref|YP_848152.1| cysteinyl-tRNA synthetase, class Ia [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700529|gb|ABK19717.1| cysteinyl-tRNA synthetase, class Ia [Syntrophobacter fumaroxidans
           MPOB]
          Length = 418

 Score =  149 bits (376), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/328 (28%), Positives = 167/328 (50%), Gaps = 20/328 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ R+   F+  +   ++M+ CGP++Y   H+GN R  +  DVL R L +     
Sbjct: 2   LQLYNTMSRRKERFEPRNEGAVKMFSCGPSIYGRPHVGNYRSFLWEDVLQRYLEHL--GF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V    ++TD++DK I  A++   ++        +T +NT+ F ++   L    P+  PR
Sbjct: 60  TVERALSLTDVEDKAISEAQKAGTTV------LELTDRNTRLFFEEAGALRIKLPSLVPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-QKMGTRVPEKY 183
           ++  + Q + LI  ++  G AY    ++ FD   +  +G   R  + +  K   R  +  
Sbjct: 114 SSTTVEQAVRLILLLLSKGIAYWHEGDVFFDPLQVKGFGRLFRLDMSKWPKAKRRFKQDT 173

Query: 184 H---KKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           +   + N  DF+LW      +P  W++P G+GRP W+I+  AM + +LG   DI  GG+D
Sbjct: 174 YPGRRWNLGDFVLWHGYRQGDPLYWDTPIGKGRPAWNIQDPAMITRHLGYTIDIACGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            ++ HH+  +A    A   E+ +  WIH   L ++G+KMSKS GN +   +LL+      
Sbjct: 234 NLYRHHDYNLA-VIEAISGEEFSRYWIHGEHLLVDGKKMSKSVGNILYPEDLLKEGA--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRL 327
                  IR  ++  ++R+ I+ T+ R 
Sbjct: 290 ---EHRHIRFYLIYGNHRKTINLTMDRF 314


>gi|149057585|gb|EDM08828.1| rCG43187, isoform CRA_b [Rattus norvegicus]
          Length = 385

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 120/222 (54%), Gaps = 39/222 (17%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++ +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+DL FPH
Sbjct: 44  KRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAFPH 103

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSW 302
           HENEIAQS    + ++  N ++H+G L+++G+  KMSKS  N+ITI + L+T       +
Sbjct: 104 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLQT-------F 156

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------------------- 336
              V RL  L T+YR  ID++   L EA  LL                            
Sbjct: 157 SPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPVGEDVL 216

Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
           W + +++K     AV +AL ND +T  A+ ++  L   + + 
Sbjct: 217 WERLASTK----KAVKAALANDFDTPRAVNSILDLVHHANRQ 254


>gi|255572116|ref|XP_002526998.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
 gi|223533633|gb|EEF35370.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
          Length = 183

 Score =  149 bits (376), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 96/174 (55%), Gaps = 2/174 (1%)

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           +   L C       R  N +P     + +      AY +  ++ F     PNYG  S +K
Sbjct: 3   NCAALTCQVLLKCSREVNPLPVKELQLSSDYQQWFAYASEGDVFFSVDEFPNYGQLSGQK 62

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           ++  + G R P+   K+NPADF LWK + P EP WESPW  GRPGWHIEC AMS   L  
Sbjct: 63  LENHRAGERNPDS-RKQNPADFALWKAAKPGEPSWESPWVPGRPGWHIECGAMSVQCLTF 121

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            FDIHGGG DLIFPH+ENE+ +S  A   E   + W+HNG +     KMSKS G
Sbjct: 122 KFDIHGGGSDLIFPHYENEMTRS-IATCQESNVSYWMHNGHVTNNNEKMSKSPG 174


>gi|261884433|ref|ZP_06008472.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 241

 Score =  149 bits (376), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/241 (38%), Positives = 134/241 (55%), Gaps = 17/241 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+++ ++  EF+ I      +YVCG  VYD AH+G+A+  I FD+L R L+   G K V
Sbjct: 3   IYDSILKQKVEFKPIREDEANIYVCGHPVYDDAHLGHAKSSISFDLLRRTLK-SLGYK-V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +++N TDIDD+I+++  Q  P   + D    IT+    ++  D   L       +P+AT
Sbjct: 61  KFIKNFTDIDDEILKKMSQ--PGKSLED----ITNHYISRYKADMYALNVADADIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +  +I  I  +  +G AY+ ++ I FDTS    Y S S RK  ++ +  RV  K  KK
Sbjct: 115 TSLTSIINYIPTLFENGWAYKIDDGIYFDTSKDDKYLSLSGRK--DENLIARVASKDEKK 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM-SSHYLGKV---FDIHGGGLDLIF 242
           +  DF+LWK     E  ++SP+GRGRPGW  EC AM   H+ G      DIH GG DL+F
Sbjct: 173 DEKDFVLWKFD---ENWYDSPFGRGRPGWRSECVAMIKDHFCGSYEFEIDIHAGGADLLF 229

Query: 243 P 243
           P
Sbjct: 230 P 230


>gi|311977536|ref|YP_003986656.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|81999783|sp|Q5UP36|SYC_MIMIV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55416788|gb|AAV50438.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204215|gb|ADO18016.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 509

 Score =  148 bits (374), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 166/341 (48%), Gaps = 46/341 (13%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +E +++E   I P+  +MYVCGPTVY+ AHIG+AR  ++ D++ R +      K    V 
Sbjct: 1   METELSE--TILPTVTKMYVCGPTVYNDAHIGHARIYVIVDLINRTMNKILN-KPTHLVM 57

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ--FVKDTTRLACLAPTHQPRATNH 128
           N+TDIDDKII  ++        N  I+ +      +  F    ++L    P    R T  
Sbjct: 58  NVTDIDDKIIRESK--------NKGITWLELARLHENSFFDCMSKLNVTRPDSVIRVTES 109

Query: 129 IPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG-SFSRRKIDEQKMGTRVPEK---Y 183
           I  ++  IQ II +G AY  +++ + FD+      G  FS    +E++    +  K    
Sbjct: 110 ISDIVLYIQQIINNGFAYIVSDSSVYFDSIEYKKAGYEFSEIDDEEEQQYESLLSKEIVS 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHG 235
            KK+  DF LWK  +  + G+   +          G PGWHIECSAM    LG   DIH 
Sbjct: 170 QKKHHKDFALWKGRSESDVGFNVEFIFDNQTFKSFGVPGWHIECSAMIKKTLGNSIDIHF 229

Query: 236 GGLDLIFPHHENEIAQSCC-----ADRIEKTANI--------WIHNGFLNLEGRKMSKSN 282
           GG+DL FPHH NE  Q+        + + ++  +        +IH G L ++G+KMSKS 
Sbjct: 230 GGIDLKFPHHYNECLQANAYHHPMYNPLHQSDTMIFHTWTREFIHVGHLCIKGQKMSKSL 289

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            NF TI E+L+        W         + T +++ +DFT
Sbjct: 290 KNFSTIKEMLDKINSNQFRW-------LFMSTKWKQQVDFT 323


>gi|207109052|ref|ZP_03243214.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 242

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/241 (36%), Positives = 133/241 (55%), Gaps = 26/241 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG 163
           + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YG
Sbjct: 3   ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYG 62

Query: 164 SFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           S S     I+  ++G  V EK   +   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 63  SLSVHNSSIEFGRIGL-VQEK---RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 118

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+  
Sbjct: 119 SMIFKTLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINN 177

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN   I + L       +++   ++R  +L  HYR  ++F      E ++L+S
Sbjct: 178 EKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVLNF-----NEEDLLVS 225

Query: 336 K 336
           K
Sbjct: 226 K 226


>gi|294921527|ref|XP_002778678.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239887397|gb|EER10473.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 451

 Score =  148 bits (374), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/147 (49%), Positives = 95/147 (64%), Gaps = 7/147 (4%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK S   EP WESPWG GRPGWHIECS M+S  LG   DIHGGG DL FPH
Sbjct: 15  KRHRNDFALWKSSKRGEPSWESPWGLGRPGWHIECSVMASEVLGAHIDIHGGGSDLKFPH 74

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NEIAQS       +  N ++H G L+++G KMSKS  NFITI + L+       S+ A
Sbjct: 75  HDNEIAQSEAYHFNAQWVNYFLHAGHLHIKGLKMSKSLKNFITIRQALQ-------SYTA 127

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +R+  L+  + +PI+F+ Q + EA+
Sbjct: 128 RQLRIMFLLQQWDKPINFSDQTIAEAK 154


>gi|288918881|ref|ZP_06413225.1| Cysteine--tRNA ligase [Frankia sp. EUN1f]
 gi|288349733|gb|EFC83966.1| Cysteine--tRNA ligase [Frankia sp. EUN1f]
          Length = 375

 Score =  146 bits (369), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 154/350 (44%), Gaps = 27/350 (7%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R+YVCG T Y   H+G+A   +  D+  R+ R    +  V   RNITD+DD +   AR+ 
Sbjct: 19  RVYVCGITPYAVTHLGHAATYLWTDLTARVWRAAGVQ--VELARNITDVDDAMFTEARRL 76

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +P +     + +     F +  + L    P H+P A   + ++I L   ++  GHAY
Sbjct: 77  --GMPFDQ----VAAMQRFSFDRSMSALGIQPPDHEPTARAAVTRVIELTTALLRAGHAY 130

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME---PG 203
           E N  +   T+   +     R              +   ++    +   R+ P E   P 
Sbjct: 131 ERNGTVYARTAEAADRAGLDRAAAITLAAEFNDDPRDPDRDDPLDVAVWRADPAEGQLPS 190

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWH EC+AM     G   D+H GG DL FPHH  E   +  A  +   A 
Sbjct: 191 WPSPWGPGRPGWHAECAAMVLSTFGSSIDLHVGGADLRFPHHAVESLLAEQATGVRPFAR 250

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+H G + + G KMSKS GN   +++LL       R  PA  +RL  L   +    DF 
Sbjct: 251 AWLHPGTVRVGGVKMSKSLGNLAFVDDLLT------RHTPA-ALRLLCLGRAWDADWDFD 303

Query: 324 VQRLTEAEILL------SKWPQTSTSKGIIDPA---VLSALYNDLNTVSA 364
                 AE  L      +  P          PA   V +AL ++L+TV A
Sbjct: 304 ESAFDAAEAALDGLYAAAARPNGGGGGERESPAAAEVDAALLDNLDTVRA 353


>gi|255018754|ref|ZP_05290880.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 198

 Score =  145 bits (367), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 116/204 (56%), Gaps = 8/204 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVPE------VADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     
Sbjct: 115 VTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPW 208
           K++  DF LWK + P E  WESP+
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPF 198


>gi|156603446|ref|XP_001618835.1| hypothetical protein NEMVEDRAFT_v1g224771 [Nematostella vectensis]
 gi|156200573|gb|EDO26735.1| predicted protein [Nematostella vectensis]
          Length = 475

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/176 (40%), Positives = 109/176 (61%), Gaps = 9/176 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   + 
Sbjct: 4   LSIYNTLTKSKEAFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDI+DKII RAR+        +   ++T +      +D  RL  L P  +PR
Sbjct: 63  -LTYVRNITDIEDKIINRAREN------GEPFDVLTERMIAAMHEDEARLNILKPDMEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           AT+HIP M+ +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+
Sbjct: 116 ATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARI 171


>gi|212695898|ref|ZP_03304026.1| hypothetical protein ANHYDRO_00431 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677021|gb|EEB36628.1| hypothetical protein ANHYDRO_00431 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 204

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 78/198 (39%), Positives = 117/198 (59%), Gaps = 15/198 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  RK  +F+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R LRY   + 
Sbjct: 1   MKIYNTFTRKKEDFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLRYLGND- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH--Q 122
            V YV N TD+DDKII +A +E+ S         +T K  + +++D   L  L   H   
Sbjct: 60  -VKYVVNFTDVDDKIINKAIKENIS------TKEVTDKYIKAYMEDAKDLN-LDEEHTIH 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           P+AT  +  +I  ++ ++    AYE++ ++ FD S   +YG  S + I++ + G      
Sbjct: 112 PKATETMDDIIDFVKELVDKDCAYESDGDVYFDISKAKDYGHLSGKNIEDLREGASNRLD 171

Query: 179 VPEKYHKKNPADFILWKR 196
             +K  K+NP DF LWK+
Sbjct: 172 DKDKGKKRNPMDFTLWKK 189


>gi|197693958|gb|ACH71648.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  145 bits (367), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 129/227 (56%), Gaps = 20/227 (8%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E+ SI    +I I        + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKENKSIQELSSIYI------GSYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKN 187
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK  ++ 
Sbjct: 55  AMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ- 112

Query: 188 PADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLI 241
             DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG +L+
Sbjct: 113 --DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGAELL 170

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           FPHH NE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I
Sbjct: 171 FPHHGNEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216


>gi|226324504|ref|ZP_03800022.1| hypothetical protein COPCOM_02287 [Coprococcus comes ATCC 27758]
 gi|225206952|gb|EEG89306.1| hypothetical protein COPCOM_02287 [Coprococcus comes ATCC 27758]
          Length = 211

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/194 (39%), Positives = 110/194 (56%), Gaps = 11/194 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL +K  EF  ++   +RMYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKVFNTLTKKKEEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E  S         I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEQVS------AQEISQRYIAECKKDMAGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + F T    +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVEMISELIDKGYAYEKNGTVYFSTRKFKDYGKLSHKNLDDLRSGGRSLLVSG 172

Query: 182 KYHKKNPADFILWK 195
           +  K++P DF+LWK
Sbjct: 173 EDEKEDPLDFVLWK 186


>gi|25808902|gb|AAN73943.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S  
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIY 53

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 54  IESYTRDLNALNVKKPSLEPKASEHLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|255327118|ref|ZP_05368193.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295736|gb|EET75078.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia mucilaginosa ATCC 25296]
          Length = 438

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 175/399 (43%), Gaps = 63/399 (15%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T   +I + Q  +     +YVCG T YD  H+G+A   + FD+L+R   +      
Sbjct: 20  RIFDTSAGEIVQVQ--EDKAASLYVCGITPYDATHMGHASTYVAFDLLHRA--WLDAGVP 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA         N     +    T+ F  D   L  + P H    
Sbjct: 76  VTYVQNVTDVDDPLLERA------TATNVDWRELAEDQTELFRTDMKALNVIPPAHYVGV 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPNYGS--------- 164
              I  +  LI+++   G AY              + ++  D  ++    +         
Sbjct: 130 VESIEWLFPLIEDLFRRGLAYRVPGFTDEQGVVHPDGDVYLDLKAVRELPANAEGYSWAP 189

Query: 165 -----FSRRKIDE---QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGW 215
                 SR ++ E   ++ G   P +  K++  D +LW+     EP W++   G GRPGW
Sbjct: 190 GEVCHLSRDEMLEIFAERGGD--PNRAGKRDALDPLLWRVEREGEPSWDAGELGAGRPGW 247

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIEC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G
Sbjct: 248 HIECTMIARRFVDGSLTVQAGGNDLTFPHHDLGAGHSWAVS-ARPHAKHYAHTGMVGLDG 306

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN + ++ L    +       A  +RLA++  HYR    +T + L  A+  L 
Sbjct: 307 HKMSKSRGNLVLVSRLRAAGE------DANAVRLAIMGQHYRSDWFWTDELLEHAKARLD 360

Query: 336 KWPQTST-------SKGIID-------PAVLSALYNDLN 360
            +    +       S+G+ D        AV  AL  DLN
Sbjct: 361 TYRHAVSVAEGREGSEGVTDEAAVELLAAVREALGEDLN 399


>gi|25808850|gb|AAN73917.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|260781591|ref|XP_002585889.1| hypothetical protein BRAFLDRAFT_256696 [Branchiostoma floridae]
 gi|229270953|gb|EEN41900.1| hypothetical protein BRAFLDRAFT_256696 [Branchiostoma floridae]
          Length = 736

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 109/207 (52%), Gaps = 26/207 (12%)

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----------------RVPEKY 183
           + H   YE+N  + FDT+      S    K+  +  G                 R+ EK 
Sbjct: 240 VRHIVKYESNKSVYFDTTKFDGADSHFYAKLVPEAFGDSKAMLEGEGDLSISQDRLSEK- 298

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
             ++  DF LWK S P EP W+SPWG GRPGWHIECS M+S  LG   DIH GG DL FP
Sbjct: 299 --RSTTDFALWKASKPGEPSWDSPWGMGRPGWHIECSVMASSILGGSLDIHTGGYDLKFP 356

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HH+NEIAQ+      +     ++H+G L +EG KMSKS  NFITI E L   ++  R   
Sbjct: 357 HHDNEIAQAEAYYDNDHWVRYFLHSGHLTIEGCKMSKSLKNFITIQEALS--RYSSRQ-- 412

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA 330
              +RL  L+  +++ +D++   +  A
Sbjct: 413 ---LRLGFLLHSWKDTLDYSSDTMGTA 436



 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/166 (32%), Positives = 78/166 (46%), Gaps = 17/166 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L RK   F       +  Y CGPTVYD +H+G+AR  I FD+L R+++ Y+   
Sbjct: 23  LKLYNSLTRKKEVFVPQKGRRVGWYSCGPTVYDTSHMGHARSYISFDILRRVMKDYFNYD 82

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDA----ISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDIDDKII+RARQ +      D       ++    T   V+D T+     P 
Sbjct: 83  -VLYAMNITDIDDKIIKRARQNYLLEQYMDKKPSRKQLLEDTQTAMKVRDLTQYGSGRPL 141

Query: 121 HQPRATNHIPQMIYLIQNI------------ILHGHAYEANNEIIF 154
              +A      M + +  +            +L GH Y      I+
Sbjct: 142 WLRQALGACSGMTHPLTRVRGRRNPLHHWSEVLLGHGYSKQQSCIY 187


>gi|242022617|ref|XP_002431736.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212517051|gb|EEB18998.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 728

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 35/247 (14%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----- 161
           F KD + L  L P    R + +IP++I  I+ II +G AY +N  + FD ++        
Sbjct: 214 FHKDMSDLNVLPPDVLTRVSEYIPEVIEYIKKIIDNGFAYHSNGSVYFDVANFDTNKKHF 273

Query: 162 --------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
                   YG     +  E  + +       KK+  DF LWK S   EP WESPWGRGRP
Sbjct: 274 YAKLVPEAYGDSKSLQEGEGDLSSTDERTSEKKSINDFALWKNSKSGEPWWESPWGRGRP 333

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S   G   DIH GG+DL FPHH+NEIAQ+          N ++H+G L +
Sbjct: 334 GWHIECSVMASAICGSNIDIHTGGVDLKFPHHDNEIAQAEAYFGSNNWINYFLHSGHLTI 393

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---TVQRLTEA 330
            G K+                KK   R      +R+A L+  +++ +D+   T++   + 
Sbjct: 394 SGCKIC--------------IKKNSARQ-----LRIAFLLHSWKDTLDYSPKTMEMSVQY 434

Query: 331 EILLSKW 337
           E LL+++
Sbjct: 435 EKLLNEF 441



 Score = 84.0 bits (206), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+  R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LKLYNSFTRQKEIFIPNVGNRVLWYSCGPTVYDASHMGHARTYISFDILRRVLTEYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V YV NITDIDDKII +ARQE+
Sbjct: 80  -VQYVMNITDIDDKIIRKARQEY 101


>gi|167957252|ref|ZP_02544326.1| Cysteine--tRNA ligase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 333

 Score =  144 bits (363), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 165/321 (51%), Gaps = 38/321 (11%)

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPW 208
           + FDTS + +YG  +R  ID  + G RV  +  K+N  DF +WK   + +  +  WESPW
Sbjct: 13  LYFDTSKLNDYGKLARLDIDGLEAGARVSVE-GKRNITDFAIWKFSPKDSQRDMEWESPW 71

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G G PGWH+ECS ++   LG   DIH GG+D I  HH NEIAQ+      ++ A IW+HN
Sbjct: 72  GVGFPGWHLECSVIARETLGDQIDIHTGGIDHIPVHHINEIAQTESVTG-KQFAQIWLHN 130

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
             + ++G KMSKS  N IT++++L+        +     ++A+L  H++   +FT + + 
Sbjct: 131 NHIKVDGHKMSKSLKNIITLDDILD------HGFSPAAFKVAVLSKHFQTEGNFTWEIMK 184

Query: 329 EAEILLSKWPQTSTSKGIIDP------------------AVLSALYNDLNTVSAIQALHK 370
            A      W + ++ +  I+                   A++  L ++LNT  A+  +  
Sbjct: 185 SANQRYKNWQRAASLRHQINKTIDNTDQEKSVPSFAASQALIEILDDNLNTPQALAHIDH 244

Query: 371 LARE------STKNHDLLPIFNASAH-ILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
           + R+      S+ N   L  F  + + ILG+++       +IS  +++L+ ER    + K
Sbjct: 245 VFRQVIEAPLSSINQSALQNFIETINDILGVDLINS--TPDISDDMKQLILERRQAREKK 302

Query: 424 KFSSADYIRKQLESKGFILED 444
            ++ +D IR +L ++G  + D
Sbjct: 303 DWAKSDLIRDKLLAQGISIRD 323


>gi|25808806|gb|AAN73895.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 121/220 (55%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S      +   +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVE--FSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808856|gb|AAN73920.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 121/220 (55%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|149061785|gb|EDM12208.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_c [Rattus
           norvegicus]
          Length = 473

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 13/161 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 304 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 363

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS
Sbjct: 424 RPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQS 464



 Score = 86.7 bits (213), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNY 193


>gi|312086706|ref|XP_003145183.1| cysteinyl tRNA synthetase 1 [Loa loa]
 gi|307759655|gb|EFO18889.1| cysteinyl tRNA synthetase 1 [Loa loa]
          Length = 470

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 71/146 (48%), Positives = 88/146 (60%), Gaps = 7/146 (4%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DF LWK S   EP W SPWG+GRPGWHIECSAMSS   G   DIH GG DL FPH
Sbjct: 19  KRNVTDFALWKASKDGEPYWNSPWGKGRPGWHIECSAMSSKICGSSLDIHAGGFDLKFPH 78

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NEIAQ      IE   N ++H G L + G KMSKS  NFITI E L       + + A
Sbjct: 79  HDNEIAQVEAYYDIENWVNYFLHCGSLRIAGLKMSKSLKNFITIREAL-------KHYSA 131

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA 330
             +R+  LM ++ + +D++   +  A
Sbjct: 132 RQLRILFLMHNWNDVLDYSAASMERA 157


>gi|283458070|ref|YP_003362681.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|310947212|sp|D2NT85|MSHC_ROTMD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|283134096|dbj|BAI64861.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 453

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 172/399 (43%), Gaps = 63/399 (15%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T   +I + Q  +     +YVCG T YD  H+G+A   + FD+L+R   +      
Sbjct: 35  RIFDTAAGEIVQVQ--EDKAASLYVCGITPYDATHMGHASTYVAFDLLHRA--WLDAGVP 90

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA         N     +    T+ F  D   L  + P H    
Sbjct: 91  VTYVQNVTDVDDPLLERA------TATNVDWRELAEDQTELFRTDMKALNVIPPAHYVGV 144

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPNY----------- 162
              I  +  LI+++   G AY              + ++  D  ++              
Sbjct: 145 VESIEWLFPLIEDLFRRGLAYRVPGFTDEQGVVHPDGDVYLDLKAVRELPANAEGYSWAP 204

Query: 163 GSFSRRKIDE------QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGW 215
           G       DE      ++ G   P +  K++  D +LW+     EP W++   G GRPGW
Sbjct: 205 GEVCHLTRDEMLEIFAERGGD--PNRAGKRDALDPLLWRVEREGEPSWDAGELGAGRPGW 262

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIEC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G
Sbjct: 263 HIECTMIARRFVDGSLTVQAGGNDLTFPHHDLGAGHSWAVS-ARPHAKHYAHTGMVGLDG 321

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN + ++ L    +       A  +RLA++  HYR    +T + L  A+  L 
Sbjct: 322 HKMSKSRGNLVLVSRLRAAGE------DANAVRLAIMGQHYRSDWFWTDELLEHAKARLD 375

Query: 336 KWPQTST-------SKGIIDPA-------VLSALYNDLN 360
            +    +       S+G+ D A       V  AL  DLN
Sbjct: 376 TYRHAVSVAEGREGSEGVTDEAAVELLTTVREALGEDLN 414


>gi|25808846|gb|AAN73915.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|148686273|gb|EDL18220.1| cysteinyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 473

 Score =  144 bits (362), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 66/161 (40%), Positives = 91/161 (56%), Gaps = 13/161 (8%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---- 160
           ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT+       
Sbjct: 304 EEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTAKFAASEK 363

Query: 161 -NYGSFSRRKIDEQK--------MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK        +         K++P DF LWK S P EP W  PWG+G
Sbjct: 364 HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 423

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS
Sbjct: 424 RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQS 464



 Score = 86.3 bits (212), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 1/84 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V Y  NITDIDDKII RARQ +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNY 193


>gi|25808922|gb|AAN73953.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 121/220 (55%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E  SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKESKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG+DL+FPHHENE  Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGVDLLFPHHENEACQTRCA 210


>gi|25808918|gb|AAN73951.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S      +   +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMHNSSVE--FSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANSPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|30961751|gb|AAP39992.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
          Length = 219

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 127/225 (56%), Gaps = 21/225 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           S+M    L         DIH GG+DL+FPHHENE  Q+ CA  +E
Sbjct: 170 SSMVFKTLALANTPYQIDIHAGGVDLLFPHHENEACQTRCAFGVE 214


>gi|25808912|gb|AAN73948.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 211

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 118/218 (54%), Gaps = 17/218 (7%)

Query: 45  RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
           R  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I      
Sbjct: 1   RSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI------ 52

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG 163
           + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N +I  DTS   +YG
Sbjct: 53  ESYTRDLNALNVKKPSLEPKASEHLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYG 112

Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAM 222
           S S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M
Sbjct: 113 SLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSM 170

Query: 223 SSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
               L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 VFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCA 208


>gi|2145826|pir||S72854 cysteine-tRNA ligase (EC 6.1.1.16) - Mycobacterium leprae
 gi|467009|gb|AAA17194.1| syC [Mycobacterium leprae]
          Length = 241

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 122/236 (51%), Gaps = 19/236 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD+++RL      E  V YV+N+TD+DD + ERA +  
Sbjct: 1   MYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGHE--VHYVQNVTDVDDPLFERADRN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   D    +  +    F  D   L  L P     AT  I +++ L+  +++ G AY 
Sbjct: 58  -GVDWRD----LAEREVALFRDDMASLRILPPHDYVAATETIVEIVELVDKMLVSGAAYV 112

Query: 148 ANNE---IIFDTSSIPNYGSFSRRKID------EQKMGTRVPEKYHKKNPADFILWKRST 198
            ++E   I F   +   +G  S    D      EQ  G   P +  K    D +LW+ + 
Sbjct: 113 IDDEYPDIYFRADATLQFGYESGYDRDTMLRLYEQSGGD--PRRPGKNGELDALLWRAAR 170

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
           P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C
Sbjct: 171 PGEPSWSSPFGPGRPGWHVECAAIALSRIGIGLDIQGGGSDLIFPHHEFTAAHAEC 226


>gi|25808810|gb|AAN73897.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  143 bits (361), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L +   E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLEWSGYE--VVLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808852|gb|AAN73918.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  143 bits (361), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808838|gb|AAN73911.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808804|gb|AAN73894.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  143 bits (360), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSDYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|221104705|ref|XP_002168960.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 543

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 79/173 (45%), Positives = 100/173 (57%), Gaps = 9/173 (5%)

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
           IP   ++  R I+   +    P    KK+  DF LWK S   EP W SPWG GRPGWHIE
Sbjct: 91  IPEIVAYIERIIENGDLSQLNPGA--KKSDRDFALWKASKVGEPYWPSPWGNGRPGWHIE 148

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           CSAM+S  LG   DIH GG+DL FPHH+NEIAQ+       +  N ++H G L +EG KM
Sbjct: 149 CSAMASDILGNSIDIHTGGVDLKFPHHDNEIAQAEAHYNCTQWINYFLHAGHLTIEGCKM 208

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           SKS  NF+T+ + L  KK   R      IRLA L+  +   +D++   L EAE
Sbjct: 209 SKSLKNFVTVKDAL--KKNTSRQ-----IRLAFLLHAWNATLDYSSNVLKEAE 254


>gi|25808906|gb|AAN73945.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  143 bits (360), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L +   E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLEWSGYE--VMLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S      +   +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMHNSSVE--FSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808848|gb|AAN73916.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S  
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIY 53

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 54  IESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLVFPHHENEACQTRCA 210


>gi|25808948|gb|AAN73966.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 118/218 (54%), Gaps = 17/218 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEHLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 172 MVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 209


>gi|25808952|gb|AAN73968.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (359), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSDYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808938|gb|AAN73961.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E  SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKESKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S      +   +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVE--FSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808824|gb|AAN73904.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 88/222 (39%), Positives = 125/222 (56%), Gaps = 21/222 (9%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L +   E  V  VRN TDIDDKII +A +E+ SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLEWSGYE--VVLVRNFTDIDDKIINKAFKENKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIE 218
           YGS S     I+  ++G  V EK   +   DF+LWK      + G++SP G+GRPGWHIE
Sbjct: 113 YGSLSVHNSSIEFGRIGL-VQEK---RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIE 168

Query: 219 CSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           CS+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 169 CSSMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808940|gb|AAN73962.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (359), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSIEFSRIALVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|325845931|ref|ZP_08169129.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481837|gb|EGC84869.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 210

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 76/195 (38%), Positives = 113/195 (57%), Gaps = 13/195 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  RK  +F+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R LRY   + 
Sbjct: 1   MKIYNTFTRKKEDFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLRYLGND- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V YV N TD+DDKII +A +E+ S         +T K  + ++ D   L      T  P
Sbjct: 60  -VKYVVNFTDVDDKIINKAIKENIS------TKEVTDKYIKAYMDDAKDLNLDEEHTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
           +AT  +  +I  ++ ++    AYE++ ++ FD S   +YG  S + I++ + G       
Sbjct: 113 KATETMDDIIDFVKELVDKDCAYESDGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDD 172

Query: 180 PEKYHKKNPADFILW 194
            +K  K+NP DF LW
Sbjct: 173 KDKGKKRNPMDFTLW 187


>gi|25808814|gb|AAN73899.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (359), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808944|gb|AAN73964.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALTNTPYQIDIHAGGTDLLFPHHENEACQTRCA 210


>gi|90076574|dbj|BAE87967.1| unnamed protein product [Macaca fascicularis]
          Length = 230

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/146 (48%), Positives = 90/146 (61%), Gaps = 7/146 (4%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPH
Sbjct: 53  KRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPH 112

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NE+AQS      +     ++H G L + G KMSKS  NFITI + L  KK   R    
Sbjct: 113 HDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL--KKHSARQ--- 167

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA 330
             +RLA LM  +++ +D++   +  A
Sbjct: 168 --LRLAFLMHSWKDTLDYSSNTMESA 191


>gi|25808844|gb|AAN73914.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E  SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKESKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808932|gb|AAN73958.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIKTLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808924|gb|AAN73954.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (358), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFSRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808834|gb|AAN73909.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808936|gb|AAN73960.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808798|gb|AAN73891.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|30959114|gb|AAO73316.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALTDTPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808836|gb|AAN73910.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808942|gb|AAN73963.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|30959116|gb|AAO73317.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808892|gb|AAN73938.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFSRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808910|gb|AAN73947.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  142 bits (357), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALTNAPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808858|gb|AAN73921.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCA 210


>gi|25808854|gb|AAN73919.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808900|gb|AAN73942.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808842|gb|AAN73913.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808916|gb|AAN73950.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 123/221 (55%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK   +   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEK---RLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808954|gb|AAN73969.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808812|gb|AAN73898.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S  
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAIKE------NKSIQELSSIY 53

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 54  IESYTRDLNALNVKQPSLEPKASEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808874|gb|AAN73929.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (356), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFETLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCA 210


>gi|25808876|gb|AAN73930.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALADTPYQIDIHAGGTDLLFPHHENEACQTRCA 210


>gi|25808816|gb|AAN73900.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 118/219 (53%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
              + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -GSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808820|gb|AAN73902.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/220 (38%), Positives = 119/220 (54%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E  SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKESKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S    +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVH--NSSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808886|gb|AAN73935.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCA 210


>gi|25808914|gb|AAN73949.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 123/221 (55%), Gaps = 21/221 (9%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIE 218
           YGS S     I+  ++G  V EK   +   DF+LWK      + G++SP G+GRPGWHIE
Sbjct: 113 YGSLSMHNSSIEFGRIGL-VQEK---RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIE 168

Query: 219 CSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           CS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 169 CSSMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRC 209


>gi|25808898|gb|AAN73941.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/222 (39%), Positives = 125/222 (56%), Gaps = 21/222 (9%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIE 218
           YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIE
Sbjct: 113 YGSLSLHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIE 168

Query: 219 CSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           CS+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 169 CSSMIFKTLALADTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808958|gb|AAN73971.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  141 bits (355), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808950|gb|AAN73967.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808862|gb|AAN73923.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808870|gb|AAN73927.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCA 210


>gi|25808860|gb|AAN73922.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808894|gb|AAN73939.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNMKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808920|gb|AAN73952.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/219 (39%), Positives = 118/219 (53%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
              + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -GSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808934|gb|AAN73959.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 123/221 (55%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AYE +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYEISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ C 
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCT 210


>gi|25808928|gb|AAN73956.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 119/220 (54%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E  SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808904|gb|AAN73944.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/222 (39%), Positives = 124/222 (55%), Gaps = 21/222 (9%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E  SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYQVSNGDIYLDTSKDKD 112

Query: 162 YGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIE 218
           YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIE
Sbjct: 113 YGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIE 168

Query: 219 CSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           CS+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 169 CSSMIFKTLALANTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808840|gb|AAN73912.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (354), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S  
Sbjct: 2   ARSAIAFDLLRRALELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIY 53

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 54  IESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSA 221
           GS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 MVFKTLALANAPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808946|gb|AAN73965.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 120/220 (54%), Gaps = 17/220 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           +M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808864|gb|AAN73924.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808872|gb|AAN73928.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808884|gb|AAN73934.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808890|gb|AAN73937.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808896|gb|AAN73940.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (353), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 124/221 (56%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ S+    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSVQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 210


>gi|25808888|gb|AAN73936.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  140 bits (352), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 123/221 (55%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ S+    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSVQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGIIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK   +   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEK---RLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCA 210


>gi|25808930|gb|AAN73957.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  139 bits (351), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 122/221 (55%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
              + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -GSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 170 SSMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCA 210


>gi|25808868|gb|AAN73926.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 87/221 (39%), Positives = 123/221 (55%), Gaps = 21/221 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           S+M    L         DIH GG DL+FPHHENE  Q+ C 
Sbjct: 170 SSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCT 210


>gi|207092910|ref|ZP_03240697.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 332

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/330 (31%), Positives = 156/330 (47%), Gaps = 45/330 (13%)

Query: 148 ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGW 204
           +N +I  DTS   +YGS S     I+  ++G  V EK   +   DF+LWK      + G+
Sbjct: 4   SNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEK---RLEQDFVLWKSYKGDNDVGF 59

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           +SP G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ CA  +E
Sbjct: 60  DSPLGKGRPGWHIECSSMIFKTLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGVE 119

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  W+HNGF+N+   KMSKS GN   I + L       +++   ++R  +L  HYR  
Sbjct: 120 -LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSV 171

Query: 320 IDFTVQRLTEAEILLSKW----PQTSTSKGIIDP----AVLSALYNDLNTVSAIQALHKL 371
           ++F  + L  ++  L K      +   + G I+P     +L  + +DLN   A+  L  +
Sbjct: 172 LNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQDDLNVSKALSVLESM 231

Query: 372 ARESTKNHD-----------LLPIFNASAHILGIEVCKEHLNKNISIA------IEKLVQ 414
              + +  D           +L        +LGI          + ++      IE  ++
Sbjct: 232 LSSTNEKLDQNPKNKTLKGEILANLKFVEELLGIGFKDPSAYFQLGVSESEKQEIENKIE 291

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILED 444
           ER      K F  AD IR++L  +   L D
Sbjct: 292 ERKRAKVQKDFLKADRIREELLKQKIALMD 321


>gi|25808866|gb|AAN73925.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 209

 Score =  139 bits (350), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/215 (39%), Positives = 117/215 (54%), Gaps = 17/215 (7%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I      + +
Sbjct: 2   IAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESY 53

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS 166
            +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S
Sbjct: 54  TRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLS 113

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSH 225
                  + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M   
Sbjct: 114 VHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFE 171

Query: 226 YLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
            L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 TLALANTPYQIDIHAGGADLLFPHHENEACQTRCA 206


>gi|30961753|gb|AAP39993.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
 gi|30961755|gb|AAP39994.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
          Length = 219

 Score =  139 bits (349), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 126/225 (56%), Gaps = 21/225 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S  
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIY 53

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +Y
Sbjct: 54  IESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           S+M    L         DIH GG+DL+FPHHENE  Q+  A  +E
Sbjct: 170 SSMVFKTLALANTPYQIDIHAGGMDLLFPHHENEACQTRWAFGVE 214


>gi|25808800|gb|AAN73892.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 119/219 (54%), Gaps = 17/219 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S    +     +R+     K+   DF+LWK      + G++S  G+GRPGWHIECS
Sbjct: 113 YGSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSHLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           +M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 209


>gi|25808926|gb|AAN73955.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 209

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 117/215 (54%), Gaps = 17/215 (7%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I      + +
Sbjct: 2   IAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESY 53

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS 166
            +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S
Sbjct: 54  TRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLS 113

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSH 225
               +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M   
Sbjct: 114 VH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFE 171

Query: 226 YLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
            L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 172 TLALANAPYQIDIHAGGSDLLFPHHENEACQTRCA 206


>gi|25808956|gb|AAN73970.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 121/220 (55%), Gaps = 21/220 (9%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           A   I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I     
Sbjct: 2   ASSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI----- 54

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +Y
Sbjct: 55  -ESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKDY 113

Query: 163 GSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIEC 219
           GS S     I+  ++G  V EK   +   DF+LWK      + G++SP G+GRPGWHIEC
Sbjct: 114 GSLSMHNSSIEFGRIGL-VQEK---RLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIEC 169

Query: 220 SAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           S+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 170 SSMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRC 209


>gi|322787495|gb|EFZ13583.1| hypothetical protein SINV_12569 [Solenopsis invicta]
          Length = 159

 Score =  138 bits (348), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/156 (44%), Positives = 94/156 (60%), Gaps = 7/156 (4%)

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           + T V +   KK+  DF LWK S   EP W+SPWGRGRPGWHIECS M+S   G   DIH
Sbjct: 3   LSTTVDKLSEKKSVTDFALWKSSKSGEPWWDSPWGRGRPGWHIECSVMASTICGDSLDIH 62

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+DL FPHH+NE+AQ+            ++H+G L + G KMSKS  NF+TI E L  
Sbjct: 63  TGGVDLKFPHHDNELAQAEAYYGNSDWVKYFLHSGHLTIAGCKMSKSLKNFVTIQEAL-- 120

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           KK+  R      +RLA L+  +++ +D++   +  A
Sbjct: 121 KKYSSRQ-----LRLAFLLHSWKDTLDYSDNTMNMA 151


>gi|25808908|gb|AAN73946.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  137 bits (345), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 17/219 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I    
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKENKSIQELSSIYI---- 54

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 55  --ESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECS 220
           YGS S    +     +R+     K+   DF+LWK      + G++S  G+GRPGWHIECS
Sbjct: 113 YGSLSMH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSHLGKGRPGWHIECS 170

Query: 221 AMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           +M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 209


>gi|293334393|ref|NP_001169895.1| hypothetical protein LOC100383789 [Zea mays]
 gi|224032219|gb|ACN35185.1| unknown [Zea mays]
          Length = 229

 Score =  137 bits (344), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 60/85 (70%), Positives = 69/85 (81%), Gaps = 1/85 (1%)

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIFPHHENE+AQS  A   E 
Sbjct: 132 EPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSQAA-YPES 190

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNF 285
               W+HNGF+N + +KM+KS+ NF
Sbjct: 191 EVKCWMHNGFVNKDDKKMAKSDNNF 215


>gi|260187118|ref|ZP_05764592.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 278

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 141/288 (48%), Gaps = 34/288 (11%)

Query: 133 IYLIQNIILHGHAYEANNE------IIFDTSSIPNYGSFSRRKID------EQKMGTRVP 180
           + LI+ ++  G AY  + E      I F   +   +G  S    D      E++ G   P
Sbjct: 1   VELIEKMLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGD--P 58

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DL
Sbjct: 59  RRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDL 118

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ L         
Sbjct: 119 IFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALRAQDV---- 174

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------ 354
                 +RL +L  HYR    ++ Q L EA   L +W +T+T+     PA +        
Sbjct: 175 --EPSAVRLGLLAGHYRADRFWSQQVLDEATARLHRW-RTATAL-PAGPAAVDVVARVRR 230

Query: 355 -LYNDLNTVSAIQALHKLARESTK--NHDL-LPIFNASA--HILGIEV 396
            L +DL+T  AI AL     ++ +   HD   P   A+A   +LG+++
Sbjct: 231 YLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL 278


>gi|25808882|gb|AAN73933.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 205

 Score =  135 bits (340), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 120/214 (56%), Gaps = 21/214 (9%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           D+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I      + + +D
Sbjct: 1   DLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRD 52

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--R 167
              L    P+ +P+A+ H+  M+ +I+ ++    AY+ +N +I  DTS   +YGS S   
Sbjct: 53  LNALNVKKPSLEPKASEHLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHY 226
             I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIECS+M    
Sbjct: 113 SSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKT 168

Query: 227 LGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
           L         DIH GG DL+FPHHENE  Q+ CA
Sbjct: 169 LALTDTPYQIDIHAGGADLLFPHHENEACQTRCA 202


>gi|226324505|ref|ZP_03800023.1| hypothetical protein COPCOM_02288 [Coprococcus comes ATCC 27758]
 gi|225206953|gb|EEG89307.1| hypothetical protein COPCOM_02288 [Coprococcus comes ATCC 27758]
          Length = 259

 Score =  135 bits (339), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 134/272 (49%), Gaps = 49/272 (18%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS  YLG+  DIH GG DLIFPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS
Sbjct: 1   MSRKYLGEQIDIHAGGEDLIFPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL-------------- 327
            GNF T+ E+ E        +   V+R  ML  HYR P++F+ + +              
Sbjct: 60  LGNFRTVREISE-------QYDLQVLRFFMLSAHYRSPLNFSAELMEASKNGLERILNAT 112

Query: 328 ---------TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR----- 373
                      AE + ++  +  +           A+ +D NT  AI A+ +L +     
Sbjct: 113 DNLKHLIASVAAEEMSAEEKEAFSKTDAYVEEFEKAMDDDFNTADAIAAIFELVKYANTT 172

Query: 374 ---ESTKNH--DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
              ES+K +   LL        +LG+ + K+   + +   IEKL++ER    K K F+ A
Sbjct: 173 ATAESSKEYLRGLLDRIVKLGDVLGLILDKKE--ELLDADIEKLIEERQAARKAKDFARA 230

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           D IR +L  KG IL+D +         +WK+K
Sbjct: 231 DAIRDELLEKGIILKDTREG------VQWKKK 256


>gi|25808808|gb|AAN73896.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 109/197 (55%), Gaps = 15/197 (7%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 12  VMLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKA 65

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     
Sbjct: 66  SEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQE 123

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 124 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGA 183

Query: 239 DLIFPHHENEIAQSCCA 255
           DL+FPHHENE  Q+ CA
Sbjct: 184 DLLFPHHENEACQTRCA 200


>gi|25808880|gb|AAN73932.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/197 (39%), Positives = 109/197 (55%), Gaps = 15/197 (7%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 12  VMLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKA 65

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     
Sbjct: 66  SEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQE 123

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 124 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGA 183

Query: 239 DLIFPHHENEIAQSCCA 255
           DL+FPHHENE  Q+ CA
Sbjct: 184 DLLFPHHENEACQTRCA 200


>gi|25808878|gb|AAN73931.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 208

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/217 (39%), Positives = 121/217 (55%), Gaps = 21/217 (9%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI    +I I      + +
Sbjct: 1   IAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS 166
            +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S
Sbjct: 53  TRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLS 112

Query: 167 --RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMS 223
                I+  ++G  V EK  ++   DF+LWK      + G++SP G+GRPGWHIECS+M 
Sbjct: 113 VHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMI 168

Query: 224 SHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
              L         DIH GG  L+FPHHENE  Q+ CA
Sbjct: 169 FKTLALTDTPYQIDIHAGGAGLLFPHHENEACQTRCA 205


>gi|30961749|gb|AAP39991.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
          Length = 197

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/203 (38%), Positives = 117/203 (57%), Gaps = 19/203 (9%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A
Sbjct: 4   VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKA 57

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEK 182
           + ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK
Sbjct: 58  SEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEK 116

Query: 183 YHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGG 236
             ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH G
Sbjct: 117 RLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALANTPYQIDIHAG 173

Query: 237 GLDLIFPHHENEIAQSCCADRIE 259
           G+DL+FPHHENE  Q+ CA  +E
Sbjct: 174 GVDLLFPHHENEACQTRCAFGVE 196


>gi|25808830|gb|AAN73907.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 205

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 17/212 (8%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           D+L R L     E  V  VRN TDIDDKII +A +E  SI    +I I      + + +D
Sbjct: 1   DLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESKSIQELSSIYI------ESYTRD 52

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRK 169
              L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S   
Sbjct: 53  LNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH- 111

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            +     +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L 
Sbjct: 112 -NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLA 170

Query: 229 KV-----FDIHGGGLDLIFPHHENEIAQSCCA 255
                   DIH GG DL+FPHHENE  Q+ CA
Sbjct: 171 LANTPYQIDIHAGGADLLFPHHENEACQTRCA 202


>gi|25808822|gb|AAN73903.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 204

 Score =  134 bits (337), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 113/199 (56%), Gaps = 19/199 (9%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 13  VMLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKQPSLEPKA 66

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEK 182
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S     I+  ++G  V EK
Sbjct: 67  SEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEK 125

Query: 183 YHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGG 236
             ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH G
Sbjct: 126 RLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAG 182

Query: 237 GLDLIFPHHENEIAQSCCA 255
           G DL+FPHHENE  Q+ CA
Sbjct: 183 GADLLFPHHENEACQTRCA 201


>gi|25808826|gb|AAN73905.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 110/197 (55%), Gaps = 15/197 (7%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A
Sbjct: 12  VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKA 65

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+++I+ ++    AY  +N +I  DTS   +YGS S       + G R+     
Sbjct: 66  SEYLGAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQE 123

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 124 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGA 183

Query: 239 DLIFPHHENEIAQSCCA 255
           DL+FPHHENE  Q+ CA
Sbjct: 184 DLLFPHHENEACQTRCA 200


>gi|25808832|gb|AAN73908.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 204

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 15/197 (7%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E      N  I  ++S   + + +D   L    P+ +P+A
Sbjct: 13  VMLVRNFTDIDDKIINKALKE------NKIIQELSSIYIESYTRDLNALNVKKPSLEPKA 66

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     
Sbjct: 67  SEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQE 124

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 125 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGA 184

Query: 239 DLIFPHHENEIAQSCCA 255
           DL+FPHHENE  Q+ CA
Sbjct: 185 DLLFPHHENEACQTRCA 201


>gi|89266455|gb|ABD65519.1| hypothetical protein [Ictalurus punctatus]
          Length = 142

 Score =  134 bits (336), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 70/142 (49%), Positives = 89/142 (62%), Gaps = 8/142 (5%)

Query: 154 FDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
           FDT SI + YG          + G++      K++P DF LWK   P+EP WESPWGRGR
Sbjct: 1   FDTRSIGSRYGKLVNMGNAAGESGSK-----DKRDPRDFALWKAWKPLEPFWESPWGRGR 55

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS ++S   G   DIH GG+DL FPHHENEIAQ       ++  N ++H+G L+
Sbjct: 56  PGWHIECSTIASSVFGSQLDIHSGGIDLAFPHHENEIAQCEAYHNCDQWGNYFLHSGHLH 115

Query: 273 LEG--RKMSKSNGNFITINELL 292
           L+G   KMSKS  N+ITI  L+
Sbjct: 116 LKGSTEKMSKSLKNYITIKRLI 137


>gi|330948101|gb|EGH48361.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 107

 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/95 (64%), Positives = 69/95 (72%), Gaps = 1/95 (1%)

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FPHHENEIAQS  A   
Sbjct: 2   PGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATG- 60

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           +  AN W+H G + + G KMSKS  NF TI ++LE
Sbjct: 61  KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE 95


>gi|46205378|ref|ZP_00048616.2| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 137

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 68/141 (48%), Positives = 88/141 (62%), Gaps = 16/141 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD A IGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFAPIDPANVRMYACGPTVYDAAXIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-- 118
           YG   VTY RN+TD+DDKI  RA +    I I D    +T     QF +D   L  L   
Sbjct: 61  YGAAHVTYARNVTDVDDKINARALER--GITIRD----LTDGTLAQFHEDLRDLGVLMAE 114

Query: 119 --------PTHQPRATNHIPQ 131
                   P ++PRAT+H+P+
Sbjct: 115 DVIGRASRPAYRPRATDHMPK 135


>gi|289447749|ref|ZP_06437493.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289420707|gb|EFD17908.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 272

 Score =  132 bits (333), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 133/263 (50%), Gaps = 24/263 (9%)

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           + A+  + F   S   Y   +  ++ E++ G   P +  K +  D +LW+ + P EP W 
Sbjct: 22  FRADATLQFGYES--GYDRDTMLRLCEERGGD--PRRPGKSDELDALLWRAARPGEPSWP 77

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C     + A  +
Sbjct: 78  SPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVSGERRFARHY 137

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G +  +G KMSKS GN + ++ L               +RL +L  HYR    ++ Q
Sbjct: 138 VHAGMIGWDGHKMSKSRGNLVLVSALRAQDV------EPSAVRLGLLAGHYRADRFWSQQ 191

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTK- 377
            L EA   L +W +T+T+     PA +         L +DL+T  AI AL     ++ + 
Sbjct: 192 VLDEATARLHRW-RTATAL-PAGPAAVDVVARVRRYLADDLDTPKAIAALDGWVTDAVEY 249

Query: 378 -NHDL-LPIFNASA--HILGIEV 396
             HD   P   A+A   +LG+++
Sbjct: 250 GGHDAGAPKLVATAIDALLGVDL 272


>gi|25808802|gb|AAN73893.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  132 bits (333), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 108/197 (54%), Gaps = 15/197 (7%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 12  VVLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKA 65

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     
Sbjct: 66  SEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQE 123

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 124 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGGA 183

Query: 239 DLIFPHHENEIAQSCCA 255
           DL+FPHHENE  Q+ C 
Sbjct: 184 DLLFPHHENEACQTRCT 200


>gi|25808818|gb|AAN73901.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  131 bits (330), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 75/197 (38%), Positives = 107/197 (54%), Gaps = 15/197 (7%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI     I I      + + +D   L    P+ +P+A
Sbjct: 12  VVLVRNFTDIDDKIINKAFKENKSIQELSGIYI------ESYTRDLNALNVKKPSLEPKA 65

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     
Sbjct: 66  SEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVH--NSSMEFSRIGLVQE 123

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 124 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGS 183

Query: 239 DLIFPHHENEIAQSCCA 255
           DL+FPHHENE  Q+ C 
Sbjct: 184 DLLFPHHENEACQTRCT 200


>gi|25808828|gb|AAN73906.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 204

 Score =  131 bits (329), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 108/197 (54%), Gaps = 15/197 (7%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 13  VILVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKA 66

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     
Sbjct: 67  SEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQE 124

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 125 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGA 184

Query: 239 DLIFPHHENEIAQSCCA 255
           DL+FPHHENE  Q+ C 
Sbjct: 185 DLLFPHHENEACQTRCT 201


>gi|323651392|gb|ADX97542.1| cysteinyl-tRNA synthetase [Courdo11 virus]
          Length = 283

 Score =  129 bits (325), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 131/278 (47%), Gaps = 30/278 (10%)

Query: 23  PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
            + I MYVCGPTVY+ +HIG+AR  ++ D++ R +     +     V NITDIDDKII+ 
Sbjct: 2   SNTINMYVCGPTVYNDSHIGHARIYVMVDIINRTMTNILNQD-THLVMNITDIDDKIIKA 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           A  +  S         ++ K   +F +   +L    P    R +  I  +I  IQ II +
Sbjct: 61  ANDQLVSWKT------LSKKYEDKFFESMAKLGVAKPDVVIRVSESIDDIIKYIQQIINN 114

Query: 143 GHAYEA-NNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEKY--HKKNPADFILWKRS 197
             AY   +  + FDT    N G      ID  EQ   +++  +    K++  DF LWK  
Sbjct: 115 DFAYVTFDGSVYFDTIKYVNAGYILDCDIDIEEQTYESQIASEIINEKRHIKDFALWKNR 174

Query: 198 TPMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              + G+   +          G PGWHIECSAM    +G   +IH GG+DL FPHH NE 
Sbjct: 175 ADYDVGFFVEFIFNNSIIKTYGVPGWHIECSAMIERTIGDSVNIHFGGIDLKFPHHHNEC 234

Query: 250 AQSCCADR----------IEKTANIWIHNGFLNLEGRK 277
            Q+                EK    +IH G L +EG+K
Sbjct: 235 LQANAYYHPKYKPNTNINTEKWTQEFIHVGHLCVEGQK 272


>gi|331243229|ref|XP_003334258.1| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309313248|gb|EFP89839.1| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 822

 Score =  129 bits (324), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 26/172 (15%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI------- 159
           F  D   L    P+   R ++++ +++  +Q I+  G AY     + FD ++        
Sbjct: 226 FFDDMATLGVEPPSVLTRVSDYVEEIVEYVQKIVERGFAYVHEGSVYFDVNAFDGAEVKD 285

Query: 160 -PNYGSFS------------RRKIDEQKMGTRVPEKYH------KKNPADFILWKRSTPM 200
            P+  +FS             +K+ E+  G              K++PADF LWK+S P 
Sbjct: 286 HPSQQTFSHCYAKLQPGSKANKKLMEEGEGALSVNPASSTATDVKRSPADFALWKKSKPG 345

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           EPGW+S WG GRPGWHIECS M+S  LG   DIH GG+DL+FPHH+NE+AQS
Sbjct: 346 EPGWQSVWGMGRPGWHIECSVMASAILGDGMDIHSGGVDLMFPHHDNEMAQS 397



 Score = 48.9 bits (115), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 18/102 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L +    F   +P+ I         +++         +  D+L R+ R Y+   
Sbjct: 24  LRVYNSLTKSKVPFIPKEPNKI--------TWNY---------VTQDILRRIARDYFAYD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
            V +V N+TDIDDKII+RARQ+H    +     +IT + T Q
Sbjct: 67  -VKFVMNVTDIDDKIIQRARQQHLLENLRSKADLITPELTDQ 107


>gi|327307610|ref|XP_003238496.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326458752|gb|EGD84205.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 453

 Score =  127 bits (318), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 88/164 (53%), Gaps = 10/164 (6%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +T     +F++D   L  L P    R T++IP++I  I+ II +G AY   +  I F+  
Sbjct: 63  LTRNFETRFLEDMWCLNVLDPDELTRVTSYIPEIIQFIEKIIDNGFAYSTLDGSIYFNID 122

Query: 158 SIPNYGSF---------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
              N G+            + +     G+       K +  DF LW+ S P EP W SPW
Sbjct: 123 KFENAGNHYAKLEPWNRHNKHLQRDGEGSLSKNTTAKASKNDFALWEASRPGEPSWPSPW 182

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           G GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+ Q+
Sbjct: 183 GNGRPGWHIECSAMASAKLGSQIDIHSGGIDLAFPHHDNELPQN 226


>gi|229100889|ref|ZP_04231693.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
 gi|228682468|gb|EEL36541.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
          Length = 254

 Score =  125 bits (314), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/271 (33%), Positives = 131/271 (48%), Gaps = 51/271 (18%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSK 280
           M+  YLG   DIH GG DL FPHHENEIAQS       KT A  W+HNG++N++  KMSK
Sbjct: 1   MARKYLGDTIDIHAGGQDLAFPHHENEIAQSEAL--TGKTFARYWMHNGYINIDNEKMSK 58

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-- 338
           S GNFI +++++       + +   +IR  ML  HYR PI+F+ + L      L +    
Sbjct: 59  SLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTA 111

Query: 339 ------QTSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK-- 377
                 +  +S  + D              A   A+ +D NT +AI  L+ +A  + +  
Sbjct: 112 YGNLKHRMESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYL 171

Query: 378 --NHDLLPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
              H    +  A          ILG+E+ KE L   +   IE L+Q+R+   K + F+ +
Sbjct: 172 LEEHTSKVVIEAYVKQLETLFDILGLELAKEEL---LDEEIEALIQKRIEARKNRDFALS 228

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           D IR  L+ +  ILED          TRWK+
Sbjct: 229 DQIRDDLKERNIILEDTAQG------TRWKR 253


>gi|195995945|ref|XP_002107841.1| hypothetical protein TRIADDRAFT_51757 [Trichoplax adhaerens]
 gi|190588617|gb|EDV28639.1| hypothetical protein TRIADDRAFT_51757 [Trichoplax adhaerens]
          Length = 764

 Score =  125 bits (314), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 85/170 (50%), Gaps = 45/170 (26%)

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSF------------- 165
           R + ++P++I  +Q II   + Y +N  + FDT +  N     YG               
Sbjct: 266 RVSEYVPEVIEFVQGIIKRNYGYVSNGSVYFDTVAFNNSPDHRYGKLLPEAIGDLNALAE 325

Query: 166 -----SRRKIDEQKMG-------------------TRVPEKYHKKNPADFILWKRSTPME 201
                   K+D    G                    R+ EK   ++P DF LWK S P E
Sbjct: 326 GEDNNKSNKLDSLICGLSNLSNSDAHLIGELSIGDDRLREK---RSPNDFALWKCSKPGE 382

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           P W+SPWG+GRPGWHIECS M+S  LGK  DIH GG+DL FPHHENEIAQ
Sbjct: 383 PFWDSPWGKGRPGWHIECSVMASAILGKSLDIHSGGVDLKFPHHENEIAQ 432



 Score = 80.5 bits (197), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/84 (44%), Positives = 57/84 (67%), Gaps = 1/84 (1%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          ++K+YN++ R+   F   + S +  Y CGPTVYD +H+G+AR  + FD++ R+L  Y+  
Sbjct: 6  QLKLYNSMTRRKDTFVPSNESCLSWYNCGPTVYDASHMGHARSYVSFDIIRRVLTSYFNY 65

Query: 64 KCVTYVRNITDIDDKIIERARQEH 87
            ++Y  NITDIDDKII RAR+ +
Sbjct: 66 N-ISYAMNITDIDDKIIFRARRNY 88


>gi|213022498|ref|ZP_03336945.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 151

 Score =  123 bits (309), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 67/157 (42%), Positives = 96/157 (61%), Gaps = 9/157 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR + G K
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLR-FLGYK 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIP 160
           AT+HI ++I L + +I  GHAY A+N +++FD  + P
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDP 150


>gi|780131|gb|AAD09434.1| cysteinyl-tRNA synthetase [Buchnera aphidicola]
          Length = 178

 Score =  122 bits (306), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 108/184 (58%), Gaps = 9/184 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT   K   F+ I    I +YVCG TVYDF HIG+AR  +VFD++ R LR    + 
Sbjct: 2   LKIFNTATSKKEIFKPIKNKKINLYVCGVTVYDFCHIGHARTFVVFDMIVRYLRLIGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII ++ +E         IS  T+   ++  KD + L    P  +PR
Sbjct: 61  -VKYIRNITDIDDKIILKSLKEKID------ISAFTNIMIKEMNKDFSLLGISPPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            TN+I  +I +I+ +I + +AY  ++ ++IF  +S   YG+ SR+ +D+   GTR+    
Sbjct: 114 VTNYIIDIIKVIEKLIKNKNAYVNDHGDVIFSINSDKFYGTLSRQSLDKLISGTRISIDK 173

Query: 184 HKKN 187
            KKN
Sbjct: 174 EKKN 177


>gi|167535910|ref|XP_001749628.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772020|gb|EDQ85679.1| predicted protein [Monosiga brevicollis MX1]
          Length = 473

 Score =  120 bits (302), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 138/339 (40%), Gaps = 70/339 (20%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
            +I N+L R++          +  Y CGPTVYD AH+G+A   +  D L R+L       
Sbjct: 39  FQITNSLTRQVEPLPIPSGRPLYWYQCGPTVYDDAHLGHAMSHLRLDALRRILE--AAGV 96

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +    ++TDIDDKII RA     +         +  +  Q F  D  +L  L P    R
Sbjct: 97  SLIQAMSVTDIDDKIIARAHANQRN------WQDLAREMEQHFWDDMAKLNVLPPHLPLR 150

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSS--IPNYGSFSRRKIDEQKMGTRVPE 181
            + H+  +I  IQNI+   HAY A +  I FD ++  +  YG F    + E       P 
Sbjct: 151 VSEHMNSIITFIQNILDRNHAYAAEDGSIYFDVTAFGLDRYGPFG---LSESNAQDAEPR 207

Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  ++P DF LWK S    EPG+ESP+GRGRPG                          
Sbjct: 208 AHDIRSPRDFALWKASRHSDEPGFESPFGRGRPG-------------------------- 241

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
                       CC          ++H G L L   KMSKS GN  +I   L        
Sbjct: 242 ------------CC----------FVHTGMLLLNSVKMSKSLGNSRSIRAFLADHS---- 275

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
              A  +R   L  +Y   +D T + +  AE  + K  Q
Sbjct: 276 ---ADSLRYIALQGYYDTSLDLTSELIDGAESAVRKLAQ 311


>gi|116747926|ref|YP_844613.1| cysteine synthases [Syntrophobacter fumaroxidans MPOB]
 gi|116696990|gb|ABK16178.1| cysteine synthases [Syntrophobacter fumaroxidans MPOB]
          Length = 773

 Score =  117 bits (293), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 173/392 (44%), Gaps = 40/392 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            +N LERK  +F+ +    +R+ V GP + +   +G +R  ++ D L R L        V
Sbjct: 308 FFNFLERKKVDFKPVVEGKVRICVTGPPLDNPLTLGESRRFLLADFLARFL--TAKSFSV 365

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V  + D+D + I        S+     +S  T +     ++D  RLA       PR++
Sbjct: 366 EQVVQVPDLDSRTI------GGSLASRMPLSAYTRQQLDLILEDLDRLAVKRAYRYPRSS 419

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHK 185
            HI  +    + ++  G AY+    + F+ S   +YG+ SR  + + ++GT V  + Y K
Sbjct: 420 EHINAITEDTKTLVNKGLAYDKLRSVYFNLSGSKDYGALSRVNLKKIRIGTTVDLDAYEK 479

Query: 186 KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            NP DF L KR+T  E       ++ WG   P WHI  ++++   LG   DI    +D +
Sbjct: 480 LNPRDFALLKRATLAELKRGVCLKTDWGNVIPTWHIAAASVALRELGAPIDIQVSSVDFL 539

Query: 242 FPHHEN--EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           FPH EN  EI  +      +  AN+W+ +  +   G  + + +G    ++E    ++   
Sbjct: 540 FPHLENVREIGHALTG---KPFANVWMLSERM-WSGADVKREDG----LSEETPIRELNK 591

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE---------ILLSKWPQTSTSKGIIDPA 350
             +    +R  +L  HYR+PI  T + +  A          I   +  +T++    + P 
Sbjct: 592 LGYSPIEVRYWLLSNHYRKPIHVTPENIDNARRGYHRLREFIHRVQHARTASQDHKLLPE 651

Query: 351 VL--------SALYNDLNTVSAIQALHKLARE 374
           ++         AL +DLN   A   L +  R+
Sbjct: 652 MIYALEQGFFDALADDLNVPRAFACLFRFIRQ 683


>gi|262043515|ref|ZP_06016633.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259039138|gb|EEW40291.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 164

 Score =  116 bits (291), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 95/167 (56%), Gaps = 9/167 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +      +  S I MYVCG TVYD  H+G+AR  + FD++ R LR+   + 
Sbjct: 2   IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RAR         +    +T +   +   D  +L  L P  +PR
Sbjct: 61  -VTFVRNITDIDDKIIQRARDT------GEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKI 170
            T HIPQ+I +I+ ++    AY A N +++F T+S   YG  S + I
Sbjct: 114 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDI 160


>gi|313585674|gb|ADR70979.1| CysS [Helicobacter pylori]
 gi|313585678|gb|ADR70981.1| CysS [Helicobacter pylori]
 gi|313585684|gb|ADR70984.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  116 bits (290), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/185 (36%), Positives = 100/185 (54%), Gaps = 15/185 (8%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 9   VMLVRNFTDIDDKIINKAFKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKA 62

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           + ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    +     +R+     
Sbjct: 63  SEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMH--NSSVEFSRIGLVQE 120

Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
           K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG 
Sbjct: 121 KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGA 180

Query: 239 DLIFP 243
           DL+FP
Sbjct: 181 DLLFP 185


>gi|313585672|gb|ADR70978.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 19/187 (10%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 9   VVLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKA 62

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEK 182
           + ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK
Sbjct: 63  SEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEK 121

Query: 183 YHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGG 236
             ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH G
Sbjct: 122 RLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFETLALTNTPYQIDIHAG 178

Query: 237 GLDLIFP 243
           G DL+FP
Sbjct: 179 GADLLFP 185


>gi|313585676|gb|ADR70980.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  115 bits (289), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 19/187 (10%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ S+    +I I      + + +D   L    P+ +P+A
Sbjct: 9   VMLVRNFTDIDDKIINKALKENKSVQELSSIYI------ESYTRDLNALNVKKPSLEPKA 62

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEK 182
           + ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK
Sbjct: 63  SEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFSRIGL-VQEK 121

Query: 183 YHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGG 236
             ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH G
Sbjct: 122 RLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALTDTPYQIDIHAG 178

Query: 237 GLDLIFP 243
           G DL+FP
Sbjct: 179 GADLLFP 185


>gi|313585670|gb|ADR70977.1| CysS [Helicobacter pylori]
 gi|313585682|gb|ADR70983.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  115 bits (288), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 105/187 (56%), Gaps = 19/187 (10%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ SI    +I I      + + +D   L    P+ +P+A
Sbjct: 9   VVLVRNFTDIDDKIINKALKENKSIQELSSIYI------ESYTRDLNALNVKKPSLEPKA 62

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEK 182
           + ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK
Sbjct: 63  SEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEK 121

Query: 183 YHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGG 236
             ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH G
Sbjct: 122 RLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAG 178

Query: 237 GLDLIFP 243
           G DL+FP
Sbjct: 179 GADLLFP 185


>gi|313585680|gb|ADR70982.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  114 bits (286), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/187 (37%), Positives = 105/187 (56%), Gaps = 19/187 (10%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V  VRN TDIDDKII +A +E+ S+    +I I      + + +D   L    P+ +P+A
Sbjct: 9   VMLVRNFTDIDDKIINKALKENKSVQELSSIYI------ESYTRDLNALNVKKPSLEPKA 62

Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEK 182
           + ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S     I+  ++G  V EK
Sbjct: 63  SEYLDTMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEK 121

Query: 183 YHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGG 236
             ++   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH G
Sbjct: 122 RLEQ---DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAG 178

Query: 237 GLDLIFP 243
           G DL+FP
Sbjct: 179 GADLLFP 185


>gi|308081958|ref|NP_001183395.1| hypothetical protein LOC100501811 [Zea mays]
 gi|238011202|gb|ACR36636.1| unknown [Zea mays]
          Length = 178

 Score =  114 bits (285), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 8/136 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ ++N+L ++   FQ      + MYVCG T YDF+HIG+AR  + FDVLYR L++   E
Sbjct: 32  QLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYE 91

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D T L CL PT +P
Sbjct: 92  --VEYVRNFTDIDDKIIKRANER------GETVTSLSSRFINEFLLDMTELQCLPPTCEP 143

Query: 124 RATNHIPQMIYLIQNI 139
           R T HI  +I LI  +
Sbjct: 144 RVTEHIEHIIELITKV 159


>gi|261881607|gb|ACY04687.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 96/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLDAMVRMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFSRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|168071075|ref|XP_001787045.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162659850|gb|EDQ48141.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 315

 Score =  113 bits (283), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 123/258 (47%), Gaps = 48/258 (18%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSK 280
           M   YLG   DIH GG DL FPHHENEIAQS       KT AN W+HNG++N++  KMSK
Sbjct: 1   MVRKYLGDTIDIHAGGQDLAFPHHENEIAQSEAL--TGKTFANYWMHNGYINIDNEKMSK 58

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-- 338
           S GNFIT+N++++            V+R  ML  HYR PI+++ + L      L +    
Sbjct: 59  SLGNFITVNDIIKIH-------DPQVLRFFMLSVHYRNPINYSEEVLENTRAGLERIRTS 111

Query: 339 ------QTSTSKGIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKN- 378
                 +++ S  + D                + ++ +D NT + I  L +L++++    
Sbjct: 112 YENLKHRSTASTDLTDTNDEWIAKIADLRKQFVESMDDDFNTANGISVLFELSKQANYYL 171

Query: 379 ----------HDLLPIFNASAHILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFS 426
                     H  +  F     +LG+ +  +    +  I   IEK  Q R    K + F+
Sbjct: 172 LEKTTSPAVIHAFMKEFEELFAVLGLSLSSDEELLDEEIEALIEKRTQAR----KDRDFA 227

Query: 427 SADYIRKQLESKGFILED 444
            AD IR QL++   ILED
Sbjct: 228 LADQIRDQLKAMNIILED 245


>gi|261881617|gb|ACY04692.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  112 bits (281), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S      +   +R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSMHNSSVEF--SRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANSPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881623|gb|ACY04695.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S    +     +R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVH--NSSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881619|gb|ACY04693.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  112 bits (280), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881613|gb|ACY04690.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  112 bits (279), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S      +   +R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSMHNSSVE--FSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881637|gb|ACY04702.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  111 bits (278), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881645|gb|ACY04706.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881647|gb|ACY04707.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSMHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|229077385|ref|ZP_04210045.1| hypothetical protein bcere0023_1000 [Bacillus cereus Rock4-2]
 gi|228705919|gb|EEL58245.1| hypothetical protein bcere0023_1000 [Bacillus cereus Rock4-2]
          Length = 254

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/271 (32%), Positives = 132/271 (48%), Gaps = 51/271 (18%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSK 280
           M+  YLG   DIH GG DL FPHHENEIAQS       KT A  W+HNG++N+   KMSK
Sbjct: 1   MARKYLGDTIDIHAGGQDLAFPHHENEIAQSEAL--TGKTFARYWMHNGYININNEKMSK 58

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-- 338
           S GNFI +++++       + +   +IR  ML  HYR PI+F+ + L      L +    
Sbjct: 59  SLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTA 111

Query: 339 ------QTSTSKGIID-------------PAVLSALYNDLNTVSAIQALHKLARESTK-- 377
                 +  +S  + D              A   A+ +D NT +AI  L+ +A  + +  
Sbjct: 112 YGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYL 171

Query: 378 --NHDLLPIFNASA-------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
              H    +  A          ILG+E+ KE   + +   IE+L+Q+R+   K + F+ +
Sbjct: 172 LEEHTSKVVIEAYVKQLETLFDILGLELSKE---ELLDEEIEELIQKRIEARKNRDFALS 228

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           D IR  L+ +  ILED        + TRWK+
Sbjct: 229 DQIRDDLKERNIILED------TAQGTRWKR 253


>gi|261881635|gb|ACY04701.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S      +   +R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSVEF--SRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881621|gb|ACY04694.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  111 bits (277), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S      +   +R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSVEF--SRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881649|gb|ACY04708.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQVSNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881605|gb|ACY04686.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNTPYQIDIHAGGTDLLFPHHENEACQTRC 168


>gi|261881633|gb|ACY04700.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (275), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S      +   +R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSVEF--SRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNAPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|261881631|gb|ACY04699.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|261881609|gb|ACY04688.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 91/169 (53%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S     + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881625|gb|ACY04696.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881627|gb|ACY04697.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGR 212
            DTS   +YGS S      +   +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSMHNSSVE--FSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881663|gb|ACY04715.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (275), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSMYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK   +   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEK---RLDQDFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881611|gb|ACY04689.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|261881629|gb|ACY04698.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGR 212
            DTS   +YGS S    +     +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSVH--NSSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881689|gb|ACY04728.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881693|gb|ACY04730.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881717|gb|ACY04742.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881719|gb|ACY04743.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881721|gb|ACY04744.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881723|gb|ACY04745.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881665|gb|ACY04716.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881667|gb|ACY04717.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881671|gb|ACY04719.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881673|gb|ACY04720.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881675|gb|ACY04721.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881677|gb|ACY04722.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881679|gb|ACY04723.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (274), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881643|gb|ACY04705.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  110 bits (274), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N ++  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881669|gb|ACY04718.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (273), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 93/169 (55%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLAFTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881655|gb|ACY04711.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881615|gb|ACY04691.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (273), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881657|gb|ACY04712.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881659|gb|ACY04713.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881661|gb|ACY04714.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N ++  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881705|gb|ACY04736.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRC 168


>gi|261881651|gb|ACY04709.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVSMIKTLLEKNIAYRISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFSRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881687|gb|ACY04727.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881695|gb|ACY04731.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881703|gb|ACY04735.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881707|gb|ACY04737.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881709|gb|ACY04738.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881711|gb|ACY04739.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881713|gb|ACY04740.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881727|gb|ACY04747.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881729|gb|ACY04748.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881731|gb|ACY04749.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881733|gb|ACY04750.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881735|gb|ACY04751.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881737|gb|ACY04752.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881739|gb|ACY04753.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881741|gb|ACY04754.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881743|gb|ACY04755.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881745|gb|ACY04756.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881747|gb|ACY04757.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (273), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881641|gb|ACY04704.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGR 212
            DTS   +YGS S    +     +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSVH--NSSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881653|gb|ACY04710.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  109 bits (272), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 92/169 (54%), Gaps = 9/169 (5%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGD 61

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGR 210
           I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G+
Sbjct: 62  IYLDTSKDKDYGSLSVHN-SSVEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119

Query: 211 GRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881681|gb|ACY04724.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881683|gb|ACY04725.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881685|gb|ACY04726.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881701|gb|ACY04734.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881715|gb|ACY04741.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N ++  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881691|gb|ACY04729.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENESCQTRC 168


>gi|261881639|gb|ACY04703.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 91/167 (54%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGR 212
            DTS   +YGS S    +     +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSVH--NSSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881725|gb|ACY04746.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  108 bits (271), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 96/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK        G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNNVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|255023445|ref|ZP_05295431.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 147

 Score =  108 bits (270), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 55/150 (36%), Positives = 87/150 (58%), Gaps = 8/150 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  PR
Sbjct: 62  -VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
            T ++ ++I LI  +I  G+AYE+  ++ F
Sbjct: 115 VTENMDEIIQLISTLIEKGYAYESAGDVYF 144


>gi|261881697|gb|ACY04732.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881699|gb|ACY04733.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 62/171 (36%), Positives = 97/171 (56%), Gaps = 13/171 (7%)

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
           N +I  +++   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +
Sbjct: 2   NKSIQELSNIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61

Query: 152 IIFDTSSIPNYGSFS--RRKIDEQKMGTRVPEKYHKKNPADFILWKR-STPMEPGWESPW 208
           I  DTS   +YGS S     I+  ++G  V EK  ++   DF+LWK      + G++SP 
Sbjct: 62  IYLDTSKDKDYGSLSVHNSSIEFGRIGL-VQEKRLEQ---DFVLWKSYKGDNDVGFDSPL 117

Query: 209 GRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDLIFPHHENEIAQSCC 254
           G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 118 GKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|270708936|ref|ZP_06223130.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270315728|gb|EFA27875.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 127

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 56/133 (42%), Positives = 81/133 (60%), Gaps = 8/133 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALEN------KETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQ 137
           AT+HIP++I +++
Sbjct: 114 ATHHIPEIIEIVE 126


>gi|330948819|gb|EGH49079.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 62

 Score =  107 bits (267), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 43/62 (69%), Positives = 48/62 (77%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP 
Sbjct: 1   KEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPR 60

Query: 245 HE 246
           HE
Sbjct: 61  HE 62


>gi|2500965|sp|P77986|SYC_STAXY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1514657|emb|CAA68888.1| cysteinyl-tRNA synthetase [Staphylococcus xylosus]
          Length = 118

 Score =  107 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 8/125 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +++++  IT +  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLIKRSKE------LDESVETITDRYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHI 129
             NH+
Sbjct: 114 VMNHM 118


>gi|167465216|ref|ZP_02330305.1| cysteinyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 131

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 47/136 (34%), Positives = 81/136 (59%), Gaps = 8/136 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT+ R+  EF+ + P  + MYVCGPTVY++ HIGN RP I FDV++R L Y   + 
Sbjct: 3   LRMFNTMTREKEEFKPVVPGKVSMYVCGPTVYNYIHIGNGRPAIFFDVVHRYLTYLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDK+I +A +        + +  +  +  + +++D   L        PR
Sbjct: 62  -VTYVVNFTDVDDKLIRKAEE------TGETVKELADRFIEAYLEDMEALGIRKADINPR 114

Query: 125 ATNHIPQMIYLIQNII 140
            T ++ ++I  I++++
Sbjct: 115 VTENMDEIISFIRSLV 130


>gi|212695899|ref|ZP_03304027.1| hypothetical protein ANHYDRO_00432 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677022|gb|EEB36629.1| hypothetical protein ANHYDRO_00432 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 257

 Score =  100 bits (249), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 132/271 (48%), Gaps = 46/271 (16%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS   LG+  D+H GG DL FPHHENEIAQS      +K AN W+HNG + ++G KMSKS
Sbjct: 1   MSKKLLGETIDLHAGGEDLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAE 331
            GNF T++++        + +   V+R  +L   YR PI+FT          ++RL  A+
Sbjct: 60  LGNFFTLHDI-------KKEYDLMVVRFWLLSAGYRLPINFTREIIEQAKNSLERLNNAK 112

Query: 332 ILLSKWPQTSTS------KGII------DPAVLSALYNDLNTVSAIQALHKLAR------ 373
             +    + ++       K ++      +      + +DLNT  A+  L ++++      
Sbjct: 113 FRMDDLLEKASGNLKDEEKDLVKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKL 172

Query: 374 ESTKNHDLL----PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
           +S  + + +     +F     +LGIE  K+  +      I KL+ ER    K K F+ AD
Sbjct: 173 DSNSSKEFVEKTRALFIKLEDVLGIENRKKTDDSLDEDLINKLIDERKEAKKAKDFAKAD 232

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L   G I++D +        T+W+ K
Sbjct: 233 EIRDKLSDMGIIIKDTREG------TKWELK 257


>gi|325845903|ref|ZP_08169101.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481809|gb|EGC84841.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 257

 Score =  100 bits (248), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 132/272 (48%), Gaps = 48/272 (17%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS   LG+  D+H GG DL FPHHENEIAQS      +K AN W+HNG + ++G KMSKS
Sbjct: 1   MSKKLLGETIDLHAGGEDLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAE 331
            GNF T++++        + +   V+R  +L   YR PI+FT          ++RL  A+
Sbjct: 60  LGNFFTLHDI-------KKEYDLMVVRFWLLSAGYRLPINFTREIIEQAKNSLERLNNAK 112

Query: 332 ILLSKWPQTSTSKGIIDPA--VLSALYN-----------DLNTVSAIQALHKLAR----- 373
             +    + + S  + D    +L  L N           DLNT  A+  L ++++     
Sbjct: 113 FRMDDLLEKA-SGNLKDEEKDLLKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTK 171

Query: 374 -ESTKNHDLL----PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
            +S  + + +     +F     +LGIE  K+  +      I KL+ ER    K K F+ A
Sbjct: 172 LDSNSSKEFVEKTRALFIKLEDVLGIENRKKTDDSLDEDLINKLIDERKEAKKAKDFAKA 231

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           D IR +L   G I++D +        T+W+ K
Sbjct: 232 DEIRDKLSDMGIIIKDTREG------TKWELK 257


>gi|148690120|gb|EDL22067.1| mCG11180, isoform CRA_c [Mus musculus]
          Length = 226

 Score = 97.4 bits (241), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 83/152 (54%), Gaps = 8/152 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCN 96

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT   R
Sbjct: 97  -VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLR 149

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFD 155
            T +IPQ+I  I+ II HGHAY  A   + FD
Sbjct: 150 VTENIPQIIAFIEGIIAHGHAYSTATGSVYFD 181


>gi|213024399|ref|ZP_03338846.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 78

 Score = 96.7 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/78 (52%), Positives = 50/78 (64%)

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           FD  + P YG  SR+ +++ + G RV     K+NP DF+LWK S   EP W SPWG GRP
Sbjct: 1   FDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRP 60

Query: 214 GWHIECSAMSSHYLGKVF 231
           GWHIECSAM+   LG  F
Sbjct: 61  GWHIECSAMNCKQLGNHF 78


>gi|312093145|ref|XP_003147582.1| hypothetical protein LOAG_12019 [Loa loa]
 gi|307757252|gb|EFO16486.1| hypothetical protein LOAG_12019 [Loa loa]
          Length = 274

 Score = 90.5 bits (223), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 1/79 (1%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+  RK   F  + P  I+ Y+CGPTVYD +HIG+AR  + FD+L R+L+ Y+G   +
Sbjct: 35  LYNSFTRKKELFVPLKPKQIKWYICGPTVYDSSHIGHARAYLSFDILRRVLQDYFGYD-I 93

Query: 67  TYVRNITDIDDKIIERARQ 85
            Y+ NITDIDDKII+RARQ
Sbjct: 94  QYIMNITDIDDKIIKRARQ 112


>gi|255026265|ref|ZP_05298251.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 99

 Score = 88.6 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/87 (45%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3  IQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65 CVTYVRNITDIDDKIIERARQEHPSIP 91
           V +V N TD+DDK+I  A +   ++P
Sbjct: 62 -VKFVSNFTDVDDKLIRAANELKLTVP 87


>gi|207093180|ref|ZP_03240967.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 128

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 77/134 (57%), Gaps = 8/134 (5%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E  V
Sbjct: 3   IYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+
Sbjct: 61  VLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKAS 114

Query: 127 NHIPQMIYLIQNII 140
            ++  M+ +I+ ++
Sbjct: 115 EYLDAMVGMIETLL 128


>gi|328478464|gb|EGF48188.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 116

 Score = 87.8 bits (216), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 4/94 (4%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R    Y G K
Sbjct: 2  LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFE-YRGFK 60

Query: 65 CVTYVRNITDIDDKIIERARQ--EHPSIPINDAI 96
           VTYV N TD+DDKII  A +  E P I  ND +
Sbjct: 61 -VTYVSNFTDVDDKIITAAHKTGEAPLIWRNDLL 93


>gi|315301166|ref|ZP_07872435.1| cysteinyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630469|gb|EFR98333.1| cysteinyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 107

 Score = 87.4 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 2/87 (2%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+I+FD + R   Y   + 
Sbjct: 3  IQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIIFDTVRRYFTYRGYD- 61

Query: 65 CVTYVRNITDIDDKIIERARQEHPSIP 91
           V +V N TD+DDK+I  A +   ++P
Sbjct: 62 -VKFVSNFTDVDDKLIHAANELKLTVP 87


>gi|76154769|gb|AAX26189.2| SJCHGC03758 protein [Schistosoma japonicum]
          Length = 230

 Score = 87.0 bits (214), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 44/83 (53%), Positives = 57/83 (68%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L  +   F   D   ++ Y CGPTVYD +H+G+AR  IVFDV+ R+L  Y+  K
Sbjct: 61  VYLYNSLTLRKDLFVPQDERCVKWYTCGPTVYDVSHMGHARTYIVFDVIRRVLMDYFNFK 120

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V YV NITDIDDKII+RARQ H
Sbjct: 121 -VIYVLNITDIDDKIIKRARQNH 142


>gi|149246694|ref|XP_001527772.1| cysteinyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447726|gb|EDK42114.1| cysteinyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 411

 Score = 86.3 bits (212), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 44/116 (37%), Positives = 70/116 (60%), Gaps = 7/116 (6%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M+S   G   DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L+++G+KMSKS
Sbjct: 1   MASDVGGSQLDIHSGGVDLCFPHHDNELAQSEAYFDNDQWVNYFMHNGHLHIQGQKMSKS 60

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
             NFITI + L       + + A  +RL   ++ + +P+DF    ++E + + S +
Sbjct: 61  LKNFITIQDAL-------KDYSARQLRLVFAVSSWDKPLDFKDSLISEVKSIESTF 109


>gi|330947053|gb|EGH47846.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 161

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 51/147 (34%), Positives = 76/147 (51%), Gaps = 16/147 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE  
Sbjct: 1   GGSDLEFPHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-- 57

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
                 +   V+R  ++ +HYR  I+++   L E++  L ++        + +PA     
Sbjct: 58  -----KYHPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAF 112

Query: 351 ---VLSALYNDLNTVSAIQALHKLARE 374
                +A+ +D  T  A   L ++ RE
Sbjct: 113 VERFSTAMNDDFGTPEACAVLFEMVRE 139


>gi|289812154|ref|ZP_06542783.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 117

 Score = 84.3 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 7/113 (6%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PRAT+
Sbjct: 3   YVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPRATH 56

Query: 128 HIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +++ + G RV
Sbjct: 57  HIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARV 109


>gi|149246696|ref|XP_001527773.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447727|gb|EDK42115.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 188

 Score = 84.0 bits (206), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/83 (45%), Positives = 58/83 (69%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R   EF ++ P  +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G  
Sbjct: 53  LRIYNSLTRSKDEFISLQPGQVTWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYFGYN 112

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V +++N+TDIDDKII  ARQ++
Sbjct: 113 -VKFIQNVTDIDDKIIIAARQQY 134


>gi|297721797|ref|NP_001173262.1| Os03g0143300 [Oryza sativa Japonica Group]
 gi|255674196|dbj|BAH91990.1| Os03g0143300 [Oryza sativa Japonica Group]
          Length = 98

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 2/77 (2%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          +++++N++ +K   F+ +    +RMYVCG T YDF+HIG+AR  + FDVLYR L++   E
Sbjct: 10 QLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGYE 69

Query: 64 KCVTYVRNITDIDDKII 80
            V YVRN TDIDDK +
Sbjct: 70 --VEYVRNFTDIDDKFL 84


>gi|221118260|ref|XP_002160433.1| PREDICTED: similar to cysteinyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 170

 Score = 82.0 bits (201), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 39/86 (45%), Positives = 56/86 (65%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++ +YN+L R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L R++  Y+
Sbjct: 40  KSQLHLYNSLTRETNLFVPQSGNKVTWYSCGPTVYDASHMGHARSYITFDILRRVMSDYF 99

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
               + YV NITD+DDKII RAR+ H
Sbjct: 100 NFD-IFYVMNITDVDDKIINRARRNH 124


>gi|266623922|ref|ZP_06116857.1| cysteine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288864254|gb|EFC96552.1| cysteine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 215

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 103/229 (44%), Gaps = 46/229 (20%)

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
           A  W+HN FLN++ RKMSKS GNF T+ E+ E        +   V+R  ML  HYR P++
Sbjct: 1   AKYWMHNAFLNIDNRKMSKSLGNFFTVREISE-------KYDLSVLRFFMLSAHYRSPLN 53

Query: 322 FTVQRLTEA--------------EILLSKWPQTSTSKG----IIDPAVL---SALYNDLN 360
           F+ + +  +              + L S+    S ++G     +D  V    +A+ +D N
Sbjct: 54  FSAELMESSKNGLERILTAVDKLKDLESRAVGDSFTEGESREAVDELVAKYEAAMDDDFN 113

Query: 361 TVSAIQALHKLAR--ESTKNHD--------LLPIFNASAHILGIEVCKEHLNKNISIAIE 410
           T   I A+ +L +   ST   D        L         +LGI    E   + +   IE
Sbjct: 114 TADGISAVFELVKLSNSTAGADSSKAYVVYLKETIEKLCDVLGI--VTEKKEEMLDSEIE 171

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +++  R    K K F+ AD IR +L  KG +LED +         +WK+
Sbjct: 172 EMIAARQQARKDKNFALADEIRGKLLEKGIVLEDTREG------VKWKR 214


>gi|198413558|ref|XP_002119777.1| PREDICTED: similar to cysteinyl-tRNA synthetase, partial [Ciona
           intestinalis]
          Length = 336

 Score = 80.9 bits (198), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R+   F   + + ++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 32  LKLFNSLTRQKEVFIPENGNFVKWYSCGPTVYDASHMGHARSYISFDILRRVLMDYFGYN 91

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V Y  NITDIDDKII RAR  +
Sbjct: 92  -VLYCMNITDIDDKIITRARHNY 113



 Score = 65.9 bits (159), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 13/119 (10%)

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN--- 161
           +++ +D   L    P    R ++++P+++  ++ II +G+ Y++N  + F  S   +   
Sbjct: 218 REYFEDMDALNVSPPDVLTRVSDYVPEIVKYVEEIIKNGYGYKSNGSVYFSVSQFDSSDD 277

Query: 162 ----------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
                      G     +  E  + +   +   K+ P DF LWK S P EP WESPWG+
Sbjct: 278 HFYARLVPEAVGDLQALQEGEGSLSSVADQLNEKRAPNDFALWKASKPGEPSWESPWGK 336


>gi|289523838|ref|ZP_06440692.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502922|gb|EFD24086.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 134

 Score = 80.5 bits (197), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 8/95 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHENEIAQ+  A   ++    WIHNG+L +   KMSKS GN +T+ E+    
Sbjct: 1   GGSDLIFPHHENEIAQAEAATG-KQFVRFWIHNGYLLINKEKMSKSLGNILTVREI---- 55

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
               +++    +RL +L  HYR P+DF+   L +A
Sbjct: 56  ---RKNFQPLAVRLFILAAHYRSPLDFSDDSLIQA 87


>gi|115753744|ref|XP_001191812.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115928438|ref|XP_001180238.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 163

 Score = 79.7 bits (195), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 6/122 (4%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           + CGPTVYD AHIG+A   + FD++ R+L  ++ +  V  V  ITDIDDKII R+ +++ 
Sbjct: 48  FACGPTVYDSAHIGHASSYVRFDIIRRILAEFF-QTSVVMVMGITDIDDKIIRRSHEQN- 105

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
              + D    +     ++F +D   L  L      R ++HIP+++  I NII +G+ Y  
Sbjct: 106 ---LKD-FRELAGFYEREFYQDMQHLNVLPANVYTRVSDHIPEILTFIDNIIRNGYGYST 161

Query: 149 NN 150
           ++
Sbjct: 162 SS 163


>gi|225710076|gb|ACO10884.1| Cysteinyl-tRNA synthetase, cytoplasmic [Caligus rogercresseyi]
          Length = 122

 Score = 78.6 bits (192), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 39/83 (46%), Positives = 56/83 (67%), Gaps = 2/83 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L ++   F     S +  Y CGPTVYD +H+G+AR  + FD+L R++  Y+G  
Sbjct: 23  LSLYNSLTKRKEVF-VPRGSTVTWYNCGPTVYDASHMGHARTYLSFDILRRVMSKYFGYN 81

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            + YV NITDIDDKII+R+RQ H
Sbjct: 82  -IFYVMNITDIDDKIIKRSRQNH 103


>gi|33322800|gb|AAQ07135.1|AF496446_1 cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 44

 Score = 77.8 bits (190), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/42 (69%), Positives = 33/42 (78%)

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           E  W+SPWG+GRPGWHIEC+ MS+ YLG   DIHGGG DL F
Sbjct: 3   EIAWDSPWGKGRPGWHIECAVMSTKYLGDTLDIHGGGQDLEF 44


>gi|289811526|ref|ZP_06542155.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 70

 Score = 76.6 bits (187), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/71 (53%), Positives = 48/71 (67%), Gaps = 2/71 (2%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR + G K
Sbjct: 2  LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLR-FLGYK 60

Query: 65 CVTYVRNITDI 75
           + YVRNITDI
Sbjct: 61 -LKYVRNITDI 70


>gi|62087208|dbj|BAD92051.1| cysteine-tRNA ligase isoform b variant [Homo sapiens]
          Length = 281

 Score = 76.3 bits (186), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 37/66 (56%), Positives = 46/66 (69%), Gaps = 1/66 (1%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+    V Y  NITDIDDKII+
Sbjct: 66  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFKFD-VFYCMNITDIDDKIIK 124

Query: 82  RARQEH 87
           RARQ H
Sbjct: 125 RARQNH 130


>gi|227885421|ref|ZP_04003226.1| conserved hypothetical protein [Escherichia coli 83972]
 gi|227837606|gb|EEJ48072.1| conserved hypothetical protein [Escherichia coli 83972]
          Length = 80

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)

Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
          + MYVCG T+YD  HIG+ R  + FDV+ R LRY      + YVRN+TD+DDKII RA +
Sbjct: 2  VGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYL--GYSLNYVRNVTDVDDKIIRRAAE 59

Query: 86 EHPS 89
           H +
Sbjct: 60 NHET 63


>gi|225466980|ref|XP_002268953.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
 gi|225468419|ref|XP_002263606.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 78

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          ++++YNT+ ++    + +    + MYVCG T YD +H+G+ R  + FDVLYR L++   E
Sbjct: 6  ELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGYE 65

Query: 64 KCVTYVRNITDIDDK 78
            VTYVRN TD+DDK
Sbjct: 66 --VTYVRNFTDVDDK 78


>gi|190409217|gb|EDV12482.1| hypothetical protein SCRG_03371 [Saccharomyces cerevisiae RM11-1a]
          Length = 123

 Score = 74.3 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/84 (45%), Positives = 56/84 (66%), Gaps = 2/84 (2%)

Query: 5   IKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 23  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 82

Query: 64  KCVTYVRNITDIDDKIIERARQEH 87
             V +V+N+TDIDDKII RARQ +
Sbjct: 83  D-VQFVQNVTDIDDKIILRARQNY 105


>gi|256828837|ref|YP_003157565.1| cysteine synthase [Desulfomicrobium baculatum DSM 4028]
 gi|256578013|gb|ACU89149.1| cysteine synthase [Desulfomicrobium baculatum DSM 4028]
          Length = 768

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 173/456 (37%), Gaps = 65/456 (14%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           ++  GP++ D   +   R ++  DVL + L      + V     + D+DD+ +  AR+  
Sbjct: 330 LFTPGPSLDDLGELDVWRRIVWLDVLAKAL--VERGQSVRLAVGLADMDDRALAAAREAK 387

Query: 88  PSIPIND----AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
             I + D    A   + +      V DT  L  LA   Q RA       + L + +++ G
Sbjct: 388 --IGLQDFGLRAREFMLAHAKALGVSDTV-LFPLAGASQERA-------LGLARKLLVKG 437

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRST---- 198
            AYE    + FD +    YG  S        +G  V    Y K NPADF L KR+T    
Sbjct: 438 QAYEKLRSVYFDVTRDKTYGQISCVDTAGMNLGYTVDLADYVKDNPADFTLLKRATLQDL 497

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
            +    E+ WG+ RP W ++ +A +   LG V  +        FPH +N  A       +
Sbjct: 498 KLGDVIETEWGKVRPSWFLQLAATALDALGSV-SVMFAAESHRFPHLDNFSAIWSAGAGV 556

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFI-TINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
              A  W+ +  +        +  G  + ++ E LE    G      P +RL +L   Y 
Sbjct: 557 RPMA--WMVSQPVT------PREPGEAVPSLAEALEIAGTG------PALRLWLLSASYL 602

Query: 318 EPIDFTVQ----------RLTEAEILLSKWPQTSTSKGIIDPAV-------LSALYNDLN 360
           + + ++ +          RL +A +  S     +     ++ A+        +AL ++L+
Sbjct: 603 KSLAYSPESLVMWVKNQNRLQDAYVSASLGGAGTGVSAELEQAIYDLKTAFATALDDNLD 662

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN-----------KNISIAI 409
                 AL   A+        +    A+     +  C   L            K+     
Sbjct: 663 LAHFWPALFAFAKTVNSRAGKMSTDEAALVAEQLLACDRVLGYLDHARLPLAEKSWPREA 722

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             LV  R    K K F  AD +R +L   G  LED+
Sbjct: 723 ADLVGRREEARKAKDFVRADALRAELAGMGLRLEDH 758


>gi|317154053|ref|YP_004122101.1| cysteine synthase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944304|gb|ADU63355.1| cysteine synthase [Desulfovibrio aespoeensis Aspo-2]
          Length = 771

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 112/480 (23%), Positives = 187/480 (38%), Gaps = 96/480 (20%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
             + +Y  GP + +   +   R ++V DVL R LR    E        ++D+DD+ +  A
Sbjct: 319 GGLGLYTMGPNLDNPDGLDAWRRVVVLDVLARHLRSLGVETRAAV--GLSDMDDRTLTAA 376

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-------PRATNHIPQMIYLI 136
           R         DA   + +   +  + +  R   +A           P ++N   + + L 
Sbjct: 377 RH-------TDADRAVFAAGLRARIMERARDMGVAVAGGDGAGVDFPLSSNSEGKALELC 429

Query: 137 QNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWK 195
           + ++  G AYE    + FD      YG      +D+   G  V  + Y K NP DF L K
Sbjct: 430 RKLLGKGLAYEKLRSVYFDIFRDKRYGEIGAMDMDKVSGGRTVDLDAYVKDNPLDFTLLK 489

Query: 196 RSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           R+T ++       E+ WG  RP W ++ +A +   L ++ D+  G     FPH EN  A 
Sbjct: 490 RATLLDLKRGEVLETEWGNVRPSWFLQHAATALTSLPRI-DVMIGSEKHRFPHLENLRAI 548

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
              A R       W+ N       +    ++    T+ + L   +   R W        +
Sbjct: 549 WSAAGR---ELQAWLLN------HQATDCADATLTTVADTLGGFR-AARFW--------L 590

Query: 312 LMTHYREPI----DFTV------QRLTEAEILLSKWPQTSTS---------KGIIDPAVL 352
           L +  R+P+    D  V      +R+ EA   LS  P+T  +          G  D AV 
Sbjct: 591 LSSACRKPLCASSDNLVMWARNWRRVQEALAALSA-PRTGAAPSGESAGKIPGEADQAVF 649

Query: 353 -------SALYNDL----------------NTVSAIQALHKLARESTKNHDLLPIFNASA 389
                  +A+  DL                N  +A  AL   A  +  +  L     A  
Sbjct: 650 DLRAGFKTAMNEDLALHRFWPVLFRFVKQVNAWAAAGALTGPAASACLDELL-----AVD 704

Query: 390 HILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ILGI    +H        ++ I ++ ++ +R    + K F+++D +R Q+ + GF LED
Sbjct: 705 AILGI---LDHAQMPLPLADLPIEVQGMLADRQKAREAKDFAASDALRDQIANAGFRLED 761


>gi|156349415|ref|XP_001622048.1| hypothetical protein NEMVEDRAFT_v1g15338 [Nematostella vectensis]
 gi|156208453|gb|EDO29948.1| predicted protein [Nematostella vectensis]
          Length = 136

 Score = 71.6 bits (174), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 37/68 (54%), Positives = 47/68 (69%), Gaps = 4/68 (5%)

Query: 23 PSNIRM---YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
          PSN R    Y CGPTVYD +H+G+AR  I FD++ R+L+ Y+    V  V N+TDIDDKI
Sbjct: 9  PSNGRRVTWYSCGPTVYDASHMGHARSYITFDIVRRVLQSYFNYD-VFCVMNVTDIDDKI 67

Query: 80 IERARQEH 87
          I RAR+ H
Sbjct: 68 IHRARRNH 75


>gi|119384075|ref|YP_915131.1| cysteinyl-tRNA synthetase-like [Paracoccus denitrificans PD1222]
 gi|119373842|gb|ABL69435.1| Cysteinyl-tRNA synthetase-like protein [Paracoccus denitrificans
          PD1222]
          Length = 124

 Score = 71.2 bits (173), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/58 (51%), Positives = 41/58 (70%)

Query: 9  NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
          N+L  +   F   +P  +R+YVCGPTVYD+AHIGNARP +VFDVL R+ R  Y ++ +
Sbjct: 7  NSLGGEKQPFIPRNPREVRIYVCGPTVYDYAHIGNARPAVVFDVLVRVFRLSYPQQAL 64


>gi|242280324|ref|YP_002992453.1| cysteine synthase [Desulfovibrio salexigens DSM 2638]
 gi|242123218|gb|ACS80914.1| cysteine synthase [Desulfovibrio salexigens DSM 2638]
          Length = 764

 Score = 70.9 bits (172), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 103/238 (43%), Gaps = 24/238 (10%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +I  +   ++  GP+  +       R +++ DVL R L    G K V+ +  + D++D+ 
Sbjct: 318 SISEAETGLFTMGPSFDNPYDPEVFRRIVLLDVLARHLERE-GAK-VSALVGLADLEDQT 375

Query: 80  IERARQ-----EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
           +  +R+     E  S  I  A+            K    L         RA+  + + + 
Sbjct: 376 LAASRERGVDRETFSTEIATAVR-----------KAAYLLGVRKSMRFERASESVDRTVE 424

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFIL 193
           L + ++ HG AYE    + FD S    YG  S   ID+  +G  V  + Y K+NP DF L
Sbjct: 425 LCRALLAHGLAYEKLRSVYFDISRDKGYGQMSNMDIDKVSLGKTVDMDDYVKENPRDFTL 484

Query: 194 WKRSTPMEPGW----ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
            KR+T  +       E+ WG  RP W ++ +  +   L  V  +  G +   FPH EN
Sbjct: 485 LKRATLQDLKLGDIIETEWGNVRPSWFMQQAVTALEGLPGVSLVLAGEIHR-FPHLEN 541


>gi|317145384|ref|XP_003189699.1| hypothetical protein AOR_1_280144 [Aspergillus oryzae RIB40]
          Length = 296

 Score = 70.5 bits (171), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 3/75 (4%)

Query: 15 ITEFQAIDPSNIRM--YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
          IT F A+DP   ++  Y CGPTVYD AH+G+AR     D++ R+L+ Y+ +  V +V NI
Sbjct: 3  ITPFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKDYF-KFDVEFVMNI 61

Query: 73 TDIDDKIIERARQEH 87
          TD+DDKII R  Q+H
Sbjct: 62 TDVDDKIIVRGWQQH 76


>gi|170694948|ref|ZP_02886097.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
 gi|170140046|gb|EDT08225.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
          Length = 206

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 99/219 (45%), Gaps = 39/219 (17%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +HNG++ ++  KMSKS  NF TI E+L         + A V+R  +   HYR P++++  
Sbjct: 1   MHNGYVQIDNEKMSKSLNNFFTIREVLA-------QYDAEVVRFFIARAHYRSPLNYSDV 53

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVL-----------SALYNDLNTVSAIQALHKLARE 374
            + +A   L +   T+      D A L           +A+ +D NT  A+  L +LA E
Sbjct: 54  HIDDARNALGRL-YTALKDVTPDGAALDWNEAHAQRFQAAMNDDFNTPVAVSVLFELATE 112

Query: 375 STKNHD-----LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ---------ERLILL 420
             +  D      L    A   +LG E  + +L +    A+E  ++         ER+   
Sbjct: 113 VNRTRDPALARQLRSLGAVLGLLGRE-PRAYLQQAAGAAVEGALEPAAIEAKIAERVAAK 171

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + K +++AD IR +L   G  LED   P     +T W++
Sbjct: 172 QAKDYAAADRIRAELLEAGVALED--KPGG---LTEWRR 205


>gi|311266558|ref|XP_003131141.1| PREDICTED: hypothetical protein LOC100515683 [Sus scrofa]
          Length = 283

 Score = 70.1 bits (170), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+              Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 46  VKVYNSLTRRKDPLIVSSADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCS 105

Query: 65  CVTYVRNITDIDDKIIERARQ 85
            V  V  +TD+DDKII+RA +
Sbjct: 106 -VVMVMGVTDVDDKIIKRANE 125


>gi|323700693|ref|ZP_08112605.1| cysteine synthase [Desulfovibrio sp. ND132]
 gi|323460625|gb|EGB16490.1| cysteine synthase [Desulfovibrio desulfuricans ND132]
          Length = 759

 Score = 69.7 bits (169), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 100/226 (44%), Gaps = 18/226 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDDKIIERARQEH 87
           Y  GP++ +   + + R +++ DV    LR+  G     + V  +TD+DD+ +  AR+  
Sbjct: 324 YTMGPSLDNPDGLDSWRRLVLLDVF---LRHLAGRGVKASGVAGLTDMDDRTLAAAREAD 380

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-PRATNHIPQMIYLIQNIILHGHAY 146
                 D  S+  S+      +   R   L+   + P ++      + L + ++  G AY
Sbjct: 381 -----TDRASLAESRREDILAR--GRAMGLSDELKFPLSSASNETALSLCRKLLGKGLAY 433

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRSTPME---- 201
           E    + FD      YG      +D+   G  V  + Y K NP DF L KR++ M+    
Sbjct: 434 EKLRSVYFDVFRDKRYGEIGTVDMDKVSGGRTVDLDAYVKDNPLDFTLLKRASLMDLKRG 493

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
              E+ WG  RP W ++ +AM+   L +  D+  G     FPH EN
Sbjct: 494 EVLETQWGNVRPSWFLQHAAMALDELPRT-DVMIGSDKHRFPHLEN 538


>gi|296825514|ref|XP_002850827.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238838381|gb|EEQ28043.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 601

 Score = 67.4 bits (163), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 123/291 (42%), Gaps = 55/291 (18%)

Query: 91  PINDAISIITSKNTQ----QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           PI    SI ++  T+    +F+ D   L  L P    R   ++P+++  +  + L     
Sbjct: 156 PICCGSSICSTTLTKHYESRFIGDIRSLNVLNPDELTRVVAYVPEILCFLLRVGL----- 210

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
                 I    S+ N+ +    K++ +       + + K     F+ +K    +E G+ +
Sbjct: 211 -----FILILISLRNHYA----KLEHRNRNNTSSDGWRK-----FLTFKEFCALE-GFPA 255

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
             G   PGWHIECSAM+S  LG   DI+  G+DL F HH+NE+AQ+      E  +  W 
Sbjct: 256 R-GTKLPGWHIECSAMTSAKLGNHMDINSRGIDLAFSHHDNEVAQN------EVFSLHWA 308

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
                +L   + ++    F TI E+L                  + +  +RE I+ T   
Sbjct: 309 -----SLIQAQRAQITPKFTTIREVLARSTI-------------IFLGGWREGIEITTDM 350

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
           +  + I   K          +   + SAL N  +T +A+ A+ +LA   T+
Sbjct: 351 VDTSGIREEKL------NNFLKDKIFSALCNLFDTPTAMNAILELASSFTR 395


>gi|326473872|gb|EGD97881.1| hypothetical protein TESG_05385 [Trichophyton tonsurans CBS 112818]
          Length = 306

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I+++L R  T F  +D    ++  + CGPTVYD A  G+AR  ++ D+  R++R Y+ 
Sbjct: 26  LRIWSSLTRSETAFIPVDYVGKSVTWHTCGPTVYDNAQSGHARNYVITDIPPRIMRDYFK 85

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
              V ++ NI D+DDK+I R RQ+H
Sbjct: 86  FN-VKFIMNIADVDDKVISRVRQQH 109


>gi|207109337|ref|ZP_03243499.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 65

 Score = 67.4 bits (163), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/61 (57%), Positives = 42/61 (68%), Gaps = 2/61 (3%)

Query: 30 VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS 89
          +CGPTVYD AH+G+AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ S
Sbjct: 1  MCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKS 58

Query: 90 I 90
          I
Sbjct: 59 I 59


>gi|258404957|ref|YP_003197699.1| cysteine synthase [Desulfohalobium retbaense DSM 5692]
 gi|257797184|gb|ACV68121.1| cysteine synthase [Desulfohalobium retbaense DSM 5692]
          Length = 764

 Score = 64.7 bits (156), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 104/466 (22%), Positives = 185/466 (39%), Gaps = 74/466 (15%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           +  + + ++  GP   +       R ++  D+L R LR+   E  V  V  + D D+ + 
Sbjct: 321 VQKNALGVFTPGPGPEELEQPELWRRLVWADILVRYLRHKDFE--VHGVVGLADWDEHLS 378

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
             A Q+  ++       +  ++   + +   T   C A + Q R T      + L + ++
Sbjct: 379 HLAEQQGCNLQEMRGAMLDRAEALLRRLGLETGWHCQAAS-QCRETQ-----LALCRELV 432

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRS-- 197
             G  YE    + +D     +YG   R  + +  +G  V  ++Y K NP DF L KR+  
Sbjct: 433 RKGLGYEKLRSVYYDVGRDTDYGVLRRTDLAKLSLGKTVDLDRYAKDNPRDFTLLKRTNL 492

Query: 198 TPMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
             ++ G  W++ WG  RP W+++ +A +    G   D+   G    FPH EN  A     
Sbjct: 493 ADLKRGDFWKTEWGNVRPSWYLQMAAAALAE-GIAMDVVLAGRAHHFPHMENLRALWAVR 551

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKS-NGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           + + +   +W+           M+++  G  I  +    +++ GG       +RL +L  
Sbjct: 552 NALPQ---VWL-----------MTQAVEGEAIVPDIETASERLGGMH----ALRLWLLSG 593

Query: 315 HYREPIDFTV----------QRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-------- 356
            YR+P+  +           +RL E+   L          G +DP     LY        
Sbjct: 594 GYRKPLHSSEDNATMWRRNWERLQESVATLHV---ARGEGGQVDPGFEQTLYDVKTMFWD 650

Query: 357 ---NDLNTVSAIQALHKLARESTKNHD---LLPIFNASA--------HILGIEVCKEHLN 402
              +DL+       L  L R   K      L P+  A           ILG  V   H  
Sbjct: 651 QLEDDLDLQHFWPVLWSLCRTILKKASQGRLAPVEAARGWKLVTDLDTILG--VVDWHTL 708

Query: 403 KNISIAIEKLVQERLILLKMKK----FSSADYIRKQLESKGFILED 444
                   + V++R+ L +  +    F+ AD +R+++ +KG+ LED
Sbjct: 709 PLRQDQWPEGVRDRIALREQARRDRDFARADLLRQEIVAKGYRLED 754


>gi|289607157|emb|CBI60873.1| unnamed protein product [Sordaria macrospora]
          Length = 114

 Score = 64.3 bits (155), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           + ++N+L R    F+ +DP   +R+Y CGPTVY++AHIGN R  +  D L R+LR  +  
Sbjct: 46  LTLHNSLTRSPQRFEPLDPEKGVRVYSCGPTVYNYAHIGNLRAYVFTDTLSRVLR--WKG 103

Query: 64  KCVTYVRNITD 74
             +T+V NITD
Sbjct: 104 YALTHVINITD 114


>gi|12846272|dbj|BAB27101.1| unnamed protein product [Mus musculus]
          Length = 143

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 3/82 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +G  
Sbjct: 37  VQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-- 94

Query: 65  C-VTYVRNITDIDDKIIERARQ 85
           C V    +ITD+DDKII+RA +
Sbjct: 95  CNVVMAMSITDVDDKIIKRANE 116


>gi|298528121|ref|ZP_07015525.1| cysteine synthase B [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511773|gb|EFI35675.1| cysteine synthase B [Desulfonatronospira thiodismutans ASO3-1]
          Length = 776

 Score = 62.0 bits (149), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 106/493 (21%), Positives = 195/493 (39%), Gaps = 84/493 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+  +RK    Q        ++  GP    F      R  +  DVL R L     + 
Sbjct: 302 IKIYDLQKRKKAVLQC-SGKKPGIFTPGPRTNFFQDPDFWRRAVFLDVLCRRLAQKGHDP 360

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
               V  + D DD+ +E  R++  S       ++ + ++    +K       L       
Sbjct: 361 --NPVAAVADFDDRTLECMREKGVSREDFSRETLDSIRDLAGRIKLNRNFNFLP------ 412

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM--GTRVP-E 181
           A   +   I +   ++  G AYE    + FD     +YG  +   ID +K+  G  V  E
Sbjct: 413 AAGSLDTGIEMCNKLLSRGLAYEKLRCVYFDVGRDRDYGLLA--GIDPEKIISGKTVDLE 470

Query: 182 KYHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            Y K +P DF L KR++      E   ++ WG  RP W+++ +A+++   G + D+   G
Sbjct: 471 DYVKDSPRDFTLLKRASLKDLKEENVLKTKWGNVRPSWYLQMAAVAAENAGHL-DLVMAG 529

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS-----KSNGNFI-TINEL 291
              +FPH +N ++             IW  +  L  +   ++     +  G  +  I E+
Sbjct: 530 EAHLFPHLDNLLS-------------IWKGSTSLRPQCWSLALPVHHQEKGEPLPGIQEM 576

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------- 337
              ++ GG       +R+ ++   Y  P+ F+ + L   E+ +  W              
Sbjct: 577 --AREMGGFH----PLRMWLMSVSYHRPLMFSPKNL---EMWVKNWKRLQELMGKLKICA 627

Query: 338 ----PQTSTSKGI------IDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIF 385
               P   T   +      + PA+   L +DL        L +  R+  K  + +L+ + 
Sbjct: 628 RGTRPDKETGSEVEKQCRELGPALSGCLDDDLALYKFWPQLFEFCRKMQKLLDENLMDVR 687

Query: 386 NASA---HILGIEVCKEHLN--------KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
           +A +   H+ G++   + ++            + I +L+Q R    + K F +AD +R +
Sbjct: 688 DAGSCLHHLQGLDSILKIIDWQALPLAENEYPVQISELLQARARAKEAKDFVAADELRDR 747

Query: 435 LESKGFILEDYKN 447
             S GF L D ++
Sbjct: 748 ALSSGFRLVDTRD 760


>gi|303249135|ref|ZP_07335375.1| cysteine synthase [Desulfovibrio fructosovorans JJ]
 gi|302489460|gb|EFL49407.1| cysteine synthase [Desulfovibrio fructosovorans JJ]
          Length = 767

 Score = 61.2 bits (147), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 96/462 (20%), Positives = 171/462 (37%), Gaps = 60/462 (12%)

Query: 21  IDPSNIR--MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +DP+     ++  GP +     +   R ++  DVL R L    G   +     + D++D+
Sbjct: 317 LDPAGATPGLFTFGPPLAAPGDLDAWRRVVTLDVLRRTLARGGGRPVLAV--GLADLEDR 374

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
            ++ +R     +   +      +K   Q       L  +A    P A   + + + + + 
Sbjct: 375 CLDASRAA--GVKCRE----FAAKARDQVAARAAALG-VADARFPLAGEALDEALAMTRK 427

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-KYHKKNPADFILWKRS 197
           ++  G AYE    + FD +    YG      + +  +G  V    Y K NP DF L KR 
Sbjct: 428 LMSKGLAYEKLRSVYFDVARDKAYGGLLGTDMTKLALGKTVDLLAYAKDNPQDFTLLKRV 487

Query: 198 T--PMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           +   ++ G    +PWG  RP W ++ +A +   L  V  +     D  FPH EN  A   
Sbjct: 488 SLKDLKAGDALSTPWGNVRPSWFLQMAAAAVKALPAVTVVL-TDEDKTFPHLENLRAIWS 546

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
               +   A  W+  G   + GR+  ++    +     L       R+W        +L 
Sbjct: 547 VGAGLSPAA--WLVGG--RVAGREGEEAGAADLADLLALGVHPLAVRAW--------LLS 594

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------------AVLSAL 355
             YR+P+    + L   E   ++  + + + G+I                    ++ +A+
Sbjct: 595 VGYRKPLCAVPEALRMWEKNRNRVQELAANLGLIAAGGGKASDTVAAEAEKLTQSLDAAV 654

Query: 356 YNDLNTVS---AIQALHKLARESTKNHDLLP--------IFNASAHILGI--EVCKEHLN 402
            +DL        + A  + A        L P           ++  +LG+    C     
Sbjct: 655 ADDLAVFQFWPQLFAFCRFANGLIAAGSLTPADAARLAGALGSADGVLGLLDPACLPVAT 714

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +     + KLV  R      K F  AD IR  +E  G+ +ED
Sbjct: 715 REWPAPVAKLVAAREQARNAKDFGKADAIRSDIEGLGYRVED 756


>gi|239907708|ref|YP_002954449.1| cysteine synthase B [Desulfovibrio magneticus RS-1]
 gi|239797574|dbj|BAH76563.1| cysteine synthase B [Desulfovibrio magneticus RS-1]
          Length = 773

 Score = 60.8 bits (146), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 31/241 (12%)

Query: 21  IDPSNIR--MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +DP+     ++  GP + +   +   R ++  DVL R L    G    T    + D+DD+
Sbjct: 317 LDPAAAAPGLFTFGPPLPEPGDLDAWRRIVTLDVLRRTLSRSGGRP--TLAVGLADLDDR 374

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDT-TRLACLAPTHQ------PRATNHIPQ 131
            ++ +R                 +  +++  +   ++A LA +        P A   + +
Sbjct: 375 CLDASRA--------------AGRKCREYAAEAREQVAALAESLGVADAVFPLAGEAMDE 420

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPAD 190
            + L + ++  G AYE    + FD +    YG      + +  +G  V  + Y K +P D
Sbjct: 421 AMALARKLMDKGLAYEKLRSVYFDVARDKAYGGLLGLDMTKLCLGKTVDLDSYAKDHPRD 480

Query: 191 FILWKRST--PMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           F L KR +   ++ G  W + WG  RP W ++ ++ +   L  V  +     D  FPH E
Sbjct: 481 FTLLKRVSLKDLKAGDVWATAWGNVRPSWFLQMASAAVRALPAV-TVVATDEDKTFPHIE 539

Query: 247 N 247
           N
Sbjct: 540 N 540


>gi|323141394|ref|ZP_08076285.1| DALR domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414143|gb|EFY04971.1| DALR domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 214

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 89/211 (42%), Gaps = 51/211 (24%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GNF  + ++LE        +    +R  ++ THYR P+DF+  RLTEA+  L++ 
Sbjct: 1   MSKSLGNFFMVIDILE-------HYDPETLRFFIVSTHYRSPLDFSDARLTEAQKSLARL 53

Query: 338 PQTSTSKGIID----------------------PAVLSALYNDLNTVSAIQALHKLARES 375
            Q   + G +                        A + A+ +D NT  AI  +  LA+E 
Sbjct: 54  RQAQETLGELSEMLSAGPTAESLALREKVKELREAFMEAMRDDFNTALAISHMFALAKEI 113

Query: 376 TKNH------------DLLPIFN----ASAHILGI------EVCKEHLNKNISIAIEKLV 413
              H             L+ +FN     +  I+G+         +E  +   +  +E L+
Sbjct: 114 NIYHKAVVDAGIKPDGKLVAMFNDVFAETCSIIGVLEKTAAPAAEEAGDSKEAELVEMLI 173

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILED 444
             R    K K ++ AD +R +L   G +L+D
Sbjct: 174 AMRQDARKNKNYALADELRNKLNEIGIVLQD 204


>gi|218678400|ref|ZP_03526297.1| cysteinyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 117

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 47/113 (41%), Positives = 73/113 (64%)

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
           D  VL+AL +DLNTV+A+QALH LA+ +  +      F A+A +LG+   K  +++ ++ 
Sbjct: 4   DETVLNALADDLNTVAAVQALHALAQAAHSDPAAAARFAATASLLGLLPKKAEIDEAVAA 63

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           A++ LV  RL +LK K F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 64  AVDALVAMRLEMLKAKNFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 116


>gi|242036955|ref|XP_002465872.1| hypothetical protein SORBIDRAFT_01g047370 [Sorghum bicolor]
 gi|241919726|gb|EER92870.1| hypothetical protein SORBIDRAFT_01g047370 [Sorghum bicolor]
          Length = 94

 Score = 58.9 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 12/65 (18%)

Query: 4  KIKIYNTLERKITEFQ-----------AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDV 52
          ++K++N++ R+   FQ           A+D   + MYVCG T YDF H+GN R  +VFDV
Sbjct: 9  QLKLFNSMTRRKEPFQPASSRKEPFQPAVD-GKVTMYVCGVTPYDFCHMGNGRAFVVFDV 67

Query: 53 LYRLL 57
          LYR L
Sbjct: 68 LYRYL 72


>gi|225464766|ref|XP_002265714.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 58

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 22/53 (41%), Positives = 36/53 (67%)

Query: 4  KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRL 56
          ++++YNT+ ++   F+ +    + MYVCG T YD +H+G+AR  + FDVLYR 
Sbjct: 6  ELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRF 58


>gi|25395240|pir||A87730 protein Y23H5A.1 [imported] - Caenorhabditis elegans
          Length = 230

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R+   F   + + +  Y+CGPTV D +H+G+AR  +  D+L R+ R Y+G 
Sbjct: 97  QLTVYNSLTRQKEVFVPNEGARVGWYICGPTVNDSSHMGHARSYLSLDILRRVFRDYFGY 156

Query: 64  KCVTYVRNITD 74
             V ++ NITD
Sbjct: 157 D-VEFIMNITD 166


>gi|332703394|ref|ZP_08423482.1| cysteine synthase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553543|gb|EGJ50587.1| cysteine synthase [Desulfovibrio africanus str. Walvis Bay]
          Length = 779

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 84/368 (22%), Positives = 140/368 (38%), Gaps = 57/368 (15%)

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            H   A     + + L + ++  G AYE    + +D      YG      ++   +G  V
Sbjct: 415 VHFALAGESTERALTLCRRLLARGLAYEKLRSVYYDVLRDKAYGQTGSMDLERLSLGKTV 474

Query: 180 PEK-YHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
             + Y K NP DF L KR T  +       E+ WG+ RP W ++ +A +   L     + 
Sbjct: 475 DLRDYVKDNPRDFTLLKRVTLQDLKAGDALETEWGKVRPSWFLQQAAAALDGL-PALSVA 533

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN----GFLNLEGRKMSKSNGNFITINE 290
            G     FPH EN  A       +  TA  W+      G L+  G            + E
Sbjct: 534 LGAETHRFPHLENFRAIWTLGAGVVPTA--WLVAQPVIGVLDSAGADAPGVQQPVFGLRE 591

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--------QRLTEAEILLSKW----- 337
            +     G        +R+ +L T Y +P+            ++  E  + LS       
Sbjct: 592 AVGAVSSGA------ALRMWLLSTSYHKPLSLQSLPMWSRNWRKTQELYVTLSSAERKKG 645

Query: 338 -PQTSTSKGIID--PAVLSALYNDLN-------------TVSAIQALHKLARESTKNHDL 381
            P  + ++   D    + +A+ +DL+             T++A  A+ +L+   T+    
Sbjct: 646 EPGQAVAQAAYDLRQGLFAAVEDDLSLHRFWPELFKFVRTINAKLAVGQLSGAGTEL--C 703

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLE 436
           L    A   +LGI    +H    +S +     + +LV+ R      K F  AD +R +L 
Sbjct: 704 LRRLTACDQVLGI---LDHSQAPVSPSMLTAELAELVRLREEARGRKDFPQADDLRGRLW 760

Query: 437 SKGFILED 444
            KG+ LED
Sbjct: 761 EKGYRLED 768


>gi|255018804|ref|ZP_05290930.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 207

 Score = 56.2 bits (134), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 84/206 (40%), Gaps = 48/206 (23%)

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---- 330
           G+K SKS GNFIT++++L       +     VIR  ML  HYR+PI      L +A    
Sbjct: 3   GKKXSKSLGNFITLHDVL-------KDNDPNVIRFFMLSVHYRKPITLNDAILEDAKNGL 55

Query: 331 -----------------------EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA 367
                                  E+   +W +  T    +  A    + +D NT +AI  
Sbjct: 56  ERLMIAYQNIDHRIQTDDGEYVEEVHEDEWLEQLTE---LKQAFEDDMDDDFNTANAITT 112

Query: 368 LHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQER 416
            H+LA+ +               + L +    A +LG+++     +      +E L++ER
Sbjct: 113 FHELAKRANIYLAKETVSINVLREFLSMMRLFAEVLGLKLENTQSDSLDDSEVEALIEER 172

Query: 417 LILLKMKKFSSADYIRKQLESKGFIL 442
           L     + F+ AD IR  L+ K + L
Sbjct: 173 LQARNERNFARADEIRDILKRKKYYL 198


>gi|239610479|gb|EEQ87466.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 279

 Score = 55.5 bits (132), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 12/92 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRM--YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+YN+L R    F   DP   R+  Y CGPTVYD AH+G+ R  +  D++ R+++ Y+ 
Sbjct: 24  LKMYNSLTRSKNAFIPKDPEGHRVTWYSCGPTVYDDAHLGHPRNYVTTDIIRRIMQDYFH 83

Query: 63  EKCVTYVRN---ITD-------IDDKIIERAR 84
              +   R    I+D       +DD +++ AR
Sbjct: 84  FNIIVRARQQHLISDYVAKHPVVDDHVVKTAR 115


>gi|327349091|gb|EGE77948.1| hypothetical protein BDDG_00885 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 284

 Score = 54.7 bits (130), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 12/92 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRM--YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+YN+L R    F   DP   R+  Y CGPTVYD AH+G+ R  +  D++ R+++ Y+ 
Sbjct: 24  LKMYNSLTRSKNAFIPKDPEGHRVTWYSCGPTVYDDAHLGHPRNYVTTDIIRRIMQDYFH 83

Query: 63  EKCVTYVRN---ITD-------IDDKIIERAR 84
              +   R    I D       +DD +++ AR
Sbjct: 84  FNIIVRARQQHLIADYVAKHPVVDDHVVKTAR 115


>gi|283853744|ref|ZP_06370971.1| cysteine synthase [Desulfovibrio sp. FW1012B]
 gi|283570868|gb|EFC18901.1| cysteine synthase [Desulfovibrio sp. FW1012B]
          Length = 767

 Score = 52.8 bits (125), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 98/241 (40%), Gaps = 31/241 (12%)

Query: 21  IDPSNI--RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +DP+     ++  GP + +   +   R ++  DVL R L    G    T    + D++D+
Sbjct: 317 LDPAGAVPGLFTFGPPLAEPGDLDAWRRVVTLDVLRRALSR--GPARPTLAVGLADLEDR 374

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDT-TRLACLAPTHQ------PRATNHIPQ 131
            ++ AR                 +  + F +   TR+A  A          P A   + +
Sbjct: 375 SLDAARA--------------AGQKCRDFAEAARTRVAGYAGLLGVSGAVFPLAGEALDE 420

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-KYHKKNPAD 190
            + L + ++  G AYE    + FD +    YG      + +  +G  V    Y K NP D
Sbjct: 421 ALALTRKLMGKGLAYEKLRSVYFDVARDKAYGRLLGTDMTKLALGKTVDLLAYAKDNPQD 480

Query: 191 FILWKRST--PMEPG--WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           F L KR +   ++ G    + WG  RP W ++ +A ++  L  V  +     D  FPH E
Sbjct: 481 FTLLKRVSLKDLKAGDALATTWGNVRPSWFLQMAAAAAQALPAVTVVL-TDEDKTFPHLE 539

Query: 247 N 247
           N
Sbjct: 540 N 540


>gi|300813898|ref|ZP_07094202.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511961|gb|EFK39157.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 189

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 34/181 (18%)

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIID 348
            + +   ++R  +L T YR PI+F+          ++RL  A+  L K  + S  + + +
Sbjct: 2   SKEYDLEILRFFLLTTSYRAPINFSREVMNQTKNALERLYNAKYKLEKDIELSKERALTE 61

Query: 349 P-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIF 385
                         +   A+ +DLNT  AI A+  L ++   N D           + + 
Sbjct: 62  DEKKIEEKFQTHRQSFEKAMEDDLNTADAITAIFDLVKDINVNLDENSAKKLLEEGMSLL 121

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                ILGI + +E    ++   I  L++ER    K K F  AD IR +L  KG  ++D 
Sbjct: 122 KTLTKILGI-MEREKNCDDLDEEILNLIKEREDARKNKDFKRADEIRDELLEKGIEIKDT 180

Query: 446 K 446
           +
Sbjct: 181 R 181


>gi|218458260|ref|ZP_03498351.1| cysteinyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 90

 Score = 48.1 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 46/70 (65%)

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+   K  +++ ++ A++ LV  RL +LK K F+ AD IR +L +KG  L+D K+P  
Sbjct: 20  LLGVLPKKAEIDEAVAAAVDALVAMRLEMLKAKNFAEADNIRDELTAKGIQLKDGKDPVT 79

Query: 451 GQRMTRWKQK 460
           G+R+T W+ K
Sbjct: 80  GERVTTWEVK 89


>gi|298204804|emb|CBI25637.3| unnamed protein product [Vitis vinifera]
          Length = 85

 Score = 47.0 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
           ++  K G RV     K+NPA+F+LWK   P E   ++PW    PG H+E
Sbjct: 24  LENNKAGERVDVDSRKRNPAEFVLWKNVRPGESSQDNPWDFKIPGRHVE 72


>gi|156053840|ref|XP_001592846.1| hypothetical protein SS1G_05768 [Sclerotinia sclerotiorum 1980]
 gi|154703548|gb|EDO03287.1| hypothetical protein SS1G_05768 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 404

 Score = 45.4 bits (106), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 2/71 (2%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +T K   +F +D   L  LAP H  R T ++PQ++  I+ I+ +G  Y   +  + FD  
Sbjct: 134 LTQKFEHRFFEDMNALNVLAPDHITRVTEYVPQIVPFIEKIVANGFGYATPDGSVYFDID 193

Query: 158 SIPNYG-SFSR 167
           S    G S+SR
Sbjct: 194 SFEKAGHSYSR 204


>gi|153827624|ref|ZP_01980291.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149737896|gb|EDM52801.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 191

 Score = 45.4 bits (106), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 80/204 (39%), Gaps = 36/204 (17%)

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GNF TI ++L         + A  +R  ++  HYR  ++++ + L +A   L +   
Sbjct: 1   KSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYI 53

Query: 340 TSTSKGIIDPAV---------LSALYNDLNTVSAIQALHKLARE--------STKNHDLL 382
                    PA           +A+ +D NT  A   L  +ARE         T    L 
Sbjct: 54  ALRGLDRSVPAAGGEEYVTRFTTAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALG 113

Query: 383 PIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
            +    A ++GI         +       +  IE L++ R      K +++AD  R +L 
Sbjct: 114 SLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 173

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
             G +LED      G   T W++K
Sbjct: 174 EMGIVLED------GPNGTTWRRK 191


>gi|293376478|ref|ZP_06622707.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842048|ref|ZP_08167585.1| valine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644900|gb|EFF62981.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489770|gb|EGC92126.1| valine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 878

 Score = 44.7 bits (104), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 58/138 (42%), Gaps = 17/138 (12%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGW-HIECSAMS 223
           G ++P  YHK+          PAD   W +   +   W S   W     GW  +EC    
Sbjct: 412 GHQIPAWYHKETGEMYVGEEAPADIENWNQDEDVLDTWFSSALWPFTTLGWPDVECEDFK 471

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           +++     D    G D+IF      I QS          N+ IH    + EGRKMSKS G
Sbjct: 472 AYFPT---DTLVTGYDIIFFWVSRMIFQSLEFTDERPFKNVLIHGLVRDAEGRKMSKSLG 528

Query: 284 NFITINELLETKKFGGRS 301
           N +   +++E  K+G  S
Sbjct: 529 NGVDPMDVIE--KYGADS 544


>gi|238608061|ref|XP_002397132.1| hypothetical protein MPER_02496 [Moniliophthora perniciosa FA553]
 gi|215471001|gb|EEB98062.1| hypothetical protein MPER_02496 [Moniliophthora perniciosa FA553]
          Length = 169

 Score = 44.3 bits (103), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 22/37 (59%), Positives = 28/37 (75%), Gaps = 1/37 (2%)

Query: 51 DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
          DV+ R++  Y+G   V +V NITDIDDKII+RARQ H
Sbjct: 1  DVIRRIMSDYFGYD-VHFVMNITDIDDKIIKRARQTH 36


>gi|296085084|emb|CBI28499.3| unnamed protein product [Vitis vinifera]
          Length = 78

 Score = 43.9 bits (102), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
           ++  K G RV     K+NPA+F+LWK   P E   ++PW    PG H+E
Sbjct: 17  LENNKGGERVDVDSRKRNPAEFVLWKNVRPSESSQDNPWDFKIPGRHVE 65


>gi|313611176|gb|EFR85996.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 125

 Score = 43.9 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 11/99 (11%)

Query: 357 NDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
           +D NT +AI   H+LA+ +               + L +    A +LG+++     +   
Sbjct: 17  DDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLFAEVLGLKLENTQTDSLD 76

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
              +E L++ERL     + F+ AD IR  L+ K  ILED
Sbjct: 77  DSEVEALIEERLQARNERNFARADEIRDILKEKNIILED 115


>gi|330720057|gb|EGG98482.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 182

 Score = 43.5 bits (101), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 46/187 (24%)

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-------------L 352
           V+R  ++ +HYR  I+++ + L +A+  L ++  T  +    + AV              
Sbjct: 8   VVRYFLISSHYRSAINYSEESLKQAQQALERFYNTLRNAQPSNEAVPVVESNTEFRIRFE 67

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLP----IFNASAHILGI-------------- 394
           +A+ +D NT  A+  L  LARE  +     P    +       LGI              
Sbjct: 68  TAMNDDFNTPEALAVLFDLAREINRGGTSTPAQVELLKELGETLGILQQEPEAFLQGGDT 127

Query: 395 -EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            E+  E         IE+L+ +R      K ++ AD IR  L  KG +L      D+G+ 
Sbjct: 128 GEISAEQ--------IEQLIIDRKNARSDKDWARADEIRDLLIEKGVVL------DDGRE 173

Query: 454 MTRWKQK 460
            T W+++
Sbjct: 174 GTTWRRQ 180


>gi|19115794|ref|NP_594882.1| cytoplasmic leucine-tRNA ligase Lrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1711638|sp|Q10490|SYLC_SCHPO RecName: Full=Putative leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|1314182|emb|CAA97370.1| cytoplasmic leucine-tRNA ligase Lrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 1111

 Score = 43.5 bits (101), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 9/82 (10%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITIN 289
           FDI   G DL+ P+H      +  A   EK     I  NG L + G KMSKS GNF+T++
Sbjct: 691 FDIRASGKDLV-PNHLTFCLYTHTAIFDEKYWPKGIRANGHLLMNGEKMSKSTGNFMTLH 749

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           E   TKKFG     A   RLA+
Sbjct: 750 E--ATKKFG-----ADATRLAL 764


>gi|294501414|ref|YP_003565114.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351351|gb|ADE71680.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 880

 Score = 43.1 bits (100), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 17/138 (12%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGW-HIECSAMS 223
           G R+P  YHK+          PAD   W++ + +   W S   W     GW  ++ +   
Sbjct: 415 GHRIPAWYHKETGEVYVDHEAPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFK 474

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            +Y   V      G D+IF      I Q           ++ IH    + EGRKMSKS G
Sbjct: 475 RYYPTNVLVT---GYDIIFFWVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLG 531

Query: 284 NFITINELLETKKFGGRS 301
           N +   E++E  K+G  S
Sbjct: 532 NGVDPMEVIE--KYGADS 547


>gi|295706762|ref|YP_003599837.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804421|gb|ADF41487.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 880

 Score = 43.1 bits (100), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 58/138 (42%), Gaps = 17/138 (12%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGW-HIECSAMS 223
           G R+P  YHK+          PAD   W++ + +   W S   W     GW  ++ +   
Sbjct: 415 GHRIPAWYHKETGEVYVDHETPADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFK 474

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            +Y   V      G D+IF      I Q           ++ IH    + EGRKMSKS G
Sbjct: 475 RYYPTNVLVT---GYDIIFFWVSRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLG 531

Query: 284 NFITINELLETKKFGGRS 301
           N +   E++E  K+G  S
Sbjct: 532 NGVDPMEVIE--KYGADS 547


>gi|296085083|emb|CBI28498.3| unnamed protein product [Vitis vinifera]
          Length = 84

 Score = 42.7 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 32/70 (45%)

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           N   ++DT       S     ++  K G RV     K+NPA+F+LWK   P E   ++PW
Sbjct: 2   NGSCLYDTPLYLAPTSHDSYPLENNKAGKRVDVDSRKRNPAEFVLWKNVRPSESSQDNPW 61

Query: 209 GRGRPGWHIE 218
                  H+E
Sbjct: 62  DFKISRRHVE 71


>gi|319937416|ref|ZP_08011823.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807782|gb|EFW04375.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 876

 Score = 42.4 bits (98), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 100/271 (36%), Gaps = 35/271 (12%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G +VP  YHK+          P D   WK+   +   W S   W     GW    S M  
Sbjct: 410 GHQVPAWYHKETGEVYVGKTAPEDIDNWKQDEDVLDTWFSSALWPFSTMGWPNTESEMFK 469

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I QS          ++ IH    + +GRKMSKS GN
Sbjct: 470 RYFPT--DTLVTGYDIIFFWVSRMIFQSLEFTHERPFKDVLIHGLIRDEQGRKMSKSLGN 527

Query: 285 FITINELL-----ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
            +   +++     +T +F   +  AP + L  +        +F  +    A  +L    +
Sbjct: 528 GVDPMDVIDEYGADTLRFFLTTNSAPGMDLRYIPEKLEASWNFINKIWNSARFVLMNIDE 587

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG------ 393
               +       LS  Y +L+    +  L+ + R   +N D     N  + +        
Sbjct: 588 DMKYED------LSFTYLNLSDQWILNRLNDVIRSVDENMDKFEFVNVGSELYNFIWDDF 641

Query: 394 ----IEVCKEHLNKNISIAIEKLVQERLILL 420
               IE+ K HLN +     ++  QE L+ +
Sbjct: 642 CSWYIELSKAHLNSDNDTE-KRATQETLVYV 671


>gi|303328459|ref|ZP_07358896.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302861453|gb|EFL84390.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 947

 Score = 41.6 bits (96), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 10/71 (14%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           ++  H   ++ EGRKMSKS GN I   EL+E  KFG     A ++RL +    YRE I  
Sbjct: 593 SVLTHGYVVDGEGRKMSKSIGNVIAPQELIE--KFG-----AEIVRLWVSSVEYREDIRI 645

Query: 323 TVQ---RLTEA 330
           + Q   RL +A
Sbjct: 646 SDQILGRLVDA 656


>gi|212638460|ref|YP_002314980.1| valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|254783550|sp|B7GH39|SYV_ANOFW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|212559940|gb|ACJ32995.1| Valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 875

 Score = 41.2 bits (95), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W++   +   W S   W     GW  + SA  +
Sbjct: 410 GHRIPAWYHKETGEVYVDHEPPADIENWEQDQDVLDTWFSSALWPFSTMGWPDKTSADYN 469

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D+   G D+IF      I Q+          ++ IH    + +GRKMSKS GN
Sbjct: 470 RYYPT--DVLVTGYDIIFFWVSRMIFQALEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGN 527

Query: 285 FITINELLETKKFGGRS 301
            +   ++++  ++G  S
Sbjct: 528 GVDPMDVID--QYGADS 542


>gi|257893530|ref|ZP_05673183.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257829909|gb|EEV56516.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 930

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 579 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 631

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 632 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 691

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 692 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 719


>gi|257890202|ref|ZP_05669855.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257826562|gb|EEV53188.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
          Length = 930

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 579 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 631

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 632 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 691

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 692 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 719


>gi|257885188|ref|ZP_05664841.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821040|gb|EEV48174.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 932

 Score = 40.8 bits (94), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 581 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 633

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 634 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 693

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 694 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 721


>gi|293571723|ref|ZP_06682742.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291608180|gb|EFF37483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 932

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 581 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 633

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 634 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 693

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 694 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 721


>gi|293553195|ref|ZP_06673832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602605|gb|EFF32820.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 932

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 581 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 633

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 634 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 693

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 694 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 721


>gi|257888495|ref|ZP_05668148.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824549|gb|EEV51481.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 930

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 579 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 631

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 632 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 691

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 692 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 719


>gi|227550467|ref|ZP_03980516.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180368|gb|EEI61340.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 932

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 581 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 633

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 634 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 693

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 694 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 721


>gi|69244704|ref|ZP_00602968.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879376|ref|ZP_05659029.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881758|ref|ZP_05661411.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260558818|ref|ZP_05831007.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206528|ref|ZP_05921228.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565438|ref|ZP_06445887.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293568290|ref|ZP_06679614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614701|ref|ZP_06694603.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619001|ref|ZP_06698496.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294621613|ref|ZP_06700778.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950111|ref|ZP_07853397.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|68196295|gb|EAN10724.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813604|gb|EEV42362.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817416|gb|EEV44744.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260075277|gb|EEW63590.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079238|gb|EEW66929.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162767|gb|EFD10618.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291589002|gb|EFF20826.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592439|gb|EFF24046.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594662|gb|EFF26044.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598778|gb|EFF29830.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|313643552|gb|EFS08132.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
          Length = 932

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 581 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 633

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 634 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 693

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 694 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 721


>gi|293560464|ref|ZP_06676956.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937861|ref|ZP_07845177.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314941352|ref|ZP_07848245.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314951348|ref|ZP_07854402.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314992821|ref|ZP_07858222.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997981|ref|ZP_07862876.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|291605612|gb|EFF35054.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313587993|gb|EFR66838.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313592625|gb|EFR71470.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313596565|gb|EFR75410.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313599775|gb|EFR78618.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313642719|gb|EFS07299.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
          Length = 932

 Score = 40.8 bits (94), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 581 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 633

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 634 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 693

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 694 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 721


>gi|257899128|ref|ZP_05678781.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837040|gb|EEV62114.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 930

 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 579 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 631

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 632 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 691

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 692 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 719


>gi|293377353|ref|ZP_06623557.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|292644045|gb|EFF62151.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 932

 Score = 40.8 bits (94), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 581 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 633

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 634 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 693

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 694 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 721


>gi|330946917|gb|EGH47752.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 165

 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 23/157 (14%)

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSALYNDLNTVSAI 365
           +HYR  I+++   L E++  L ++        + +PA          +A+ +D  T  A 
Sbjct: 1   SHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAMNDDFGTPEAC 60

Query: 366 QALHKLARE--STKNHDLLPIFNAS------AHILGI------EVCKEHLNKNISIA-IE 410
             L ++ RE    +  D+      +      A +LG+      +  +      +  A +E
Sbjct: 61  AVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGAEGRVDAAEVE 120

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            L+Q RL     K +  +D IR Q+ + G +LED K 
Sbjct: 121 ALIQARLAARAAKDWGESDRIRDQITAMGVLLEDGKG 157


>gi|258615786|ref|ZP_05713556.1| isoleucyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 795

 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 444 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 496

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 497 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 556

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 557 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 584


>gi|257897130|ref|ZP_05676783.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257833695|gb|EEV60116.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 930

 Score = 40.8 bits (94), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 67/148 (45%), Gaps = 18/148 (12%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I  GF L+ EGRKMSKS GN I   +++  K+FG     A ++RL +    Y   +  ++
Sbjct: 579 ISQGFALDGEGRKMSKSLGNIIAPEKVI--KQFG-----ADILRLWVSSVDYEADVRVSM 631

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAI------QALHKLARE 374
             L++   +  K   T      +    DP   +  YNDL +V         Q + ++  E
Sbjct: 632 DILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDKYMTVRLNQVIKEIREE 691

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLN 402
               ++ + I+    + L +++   +L+
Sbjct: 692 GYDKYNFMHIYRTVMNFLTVDLSSFYLD 719


>gi|206975955|ref|ZP_03236865.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961947|ref|YP_002340517.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097904|ref|YP_002531961.1| valyl-tRNA synthetase [Bacillus cereus Q1]
 gi|206745707|gb|EDZ57104.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067118|gb|ACJ81368.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241962|gb|ACM14672.1| valyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 881

 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 534 GIDPMEVIE--KYGA 546


>gi|75759956|ref|ZP_00740025.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218899626|ref|YP_002448037.1| valyl-tRNA synthetase [Bacillus cereus G9842]
 gi|74492553|gb|EAO55700.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218541207|gb|ACK93601.1| valyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 881

 Score = 40.8 bits (94), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|229019683|ref|ZP_04176490.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229175140|ref|ZP_04302656.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608276|gb|EEK65582.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228741590|gb|EEL91783.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 881

 Score = 40.8 bits (94), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|229025922|ref|ZP_04182314.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735368|gb|EEL85971.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTDAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|229141196|ref|ZP_04269735.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228642237|gb|EEK98529.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 520 GIDPMEVIE--KYGA 532


>gi|228910293|ref|ZP_04074110.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849353|gb|EEM94190.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|228902987|ref|ZP_04067127.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967560|ref|ZP_04128586.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792139|gb|EEM39715.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856663|gb|EEN01183.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|229198587|ref|ZP_04325289.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584869|gb|EEK42985.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 520 GIDPMEVIE--KYGA 532


>gi|228987710|ref|ZP_04147821.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771984|gb|EEM20439.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 520 GIDPMEVIE--KYGA 532


>gi|229163414|ref|ZP_04291365.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619983|gb|EEK76858.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 867

 Score = 40.8 bits (94), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|42783595|ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409029|sp|Q72ZW8|SYV_BACC1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42739524|gb|AAS43450.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 881

 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 534 GIDPMEVIE--KYGA 546


>gi|324328361|gb|ADY23621.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 881

 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 534 GIDPMEVIE--KYGA 546


>gi|52141048|ref|YP_085781.1| valyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824177|sp|Q633Y6|SYV_BACCZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51974517|gb|AAU16067.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus cereus E33L]
          Length = 881

 Score = 40.8 bits (94), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 534 GIDPMEVIE--KYGA 546


>gi|47566648|ref|ZP_00237470.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|229158076|ref|ZP_04286146.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|47556678|gb|EAL15010.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228625395|gb|EEK82152.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 534 GIDPMEVIE--KYGA 546


>gi|228923211|ref|ZP_04086501.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836417|gb|EEM81768.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|186476942|ref|YP_001858412.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184193401|gb|ACC71366.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 726

 Score = 40.4 bits (93), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           N++ H GFL ++G KMSKS G FIT N ++ET
Sbjct: 341 NVFAH-GFLTVDGAKMSKSRGTFITANSVIET 371


>gi|156936945|ref|YP_001434741.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|189030282|sp|A8A8T2|SYL_IGNH4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156565929|gb|ABU81334.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 1022

 Score = 40.4 bits (93), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 7/47 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           + NGF+NLEG+KMSKS GN I I   +       RS+   +IRL +L
Sbjct: 686 VVNGFVNLEGKKMSKSLGNIIPITVAI-------RSFAPDIIRLVLL 725


>gi|326942237|gb|AEA18133.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSVLWPFSTLGWPNEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|228941625|ref|ZP_04104172.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974554|ref|ZP_04135120.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981149|ref|ZP_04141449.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778349|gb|EEM26616.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784957|gb|EEM32970.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228817837|gb|EEM63915.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|229123998|ref|ZP_04253190.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228659300|gb|EEL14948.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|229081723|ref|ZP_04214216.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701568|gb|EEL54061.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 867

 Score = 40.4 bits (93), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|206969837|ref|ZP_03230791.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218233729|ref|YP_002369265.1| valyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229071967|ref|ZP_04205177.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206735525|gb|EDZ52693.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218161686|gb|ACK61678.1| valine--tRNA ligase [Bacillus cereus B4264]
 gi|228711126|gb|EEL63091.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|163942206|ref|YP_001647090.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864403|gb|ABY45462.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PADF  W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADFENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 KFYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|30022546|ref|NP_834177.1| valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048175|ref|ZP_04193744.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111929|ref|ZP_04241473.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504949|ref|YP_003666649.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433513|sp|Q817R6|SYV_BACCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29898104|gb|AAP11378.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228671493|gb|EEL26793.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723162|gb|EEL74538.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326001|gb|ADH08929.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 881

 Score = 40.4 bits (93), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|228954741|ref|ZP_04116763.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229192669|ref|ZP_04319628.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590759|gb|EEK48619.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228804939|gb|EEM51536.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 867

 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|228960734|ref|ZP_04122373.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229129750|ref|ZP_04258717.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147028|ref|ZP_04275388.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180734|ref|ZP_04308072.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602712|gb|EEK60195.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636416|gb|EEK92886.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653666|gb|EEL09537.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228798950|gb|EEM45925.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 867

 Score = 40.4 bits (93), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|220903664|ref|YP_002478976.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782389|sp|B8J3R3|SYI_DESDA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219867963|gb|ACL48298.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 938

 Score = 40.0 bits (92), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 28/67 (41%), Positives = 37/67 (55%), Gaps = 10/67 (14%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFT 323
           H   ++ +GRKMSKS GN I   EL+E  KFG     A ++RL +    YRE I   D  
Sbjct: 597 HGYVVDGDGRKMSKSVGNVIAPQELIE--KFG-----AEIVRLWVSSVEYREDIRLSDEI 649

Query: 324 VQRLTEA 330
           + RL +A
Sbjct: 650 LGRLVDA 656


>gi|302817213|ref|XP_002990283.1| hypothetical protein SELMODRAFT_131311 [Selaginella moellendorffii]
 gi|300141992|gb|EFJ08698.1| hypothetical protein SELMODRAFT_131311 [Selaginella moellendorffii]
          Length = 1093

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 30/60 (50%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI +
Sbjct: 667 FDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIRD 726


>gi|169350153|ref|ZP_02867091.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
 gi|169292936|gb|EDS75069.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
          Length = 878

 Score = 40.0 bits (92), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 94/255 (36%), Gaps = 38/255 (14%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G +VP  YHK+          P D   WK+   +   W S   W     GW  E S +  
Sbjct: 416 GHQVPAWYHKETGEVYVGKQPPKDIENWKQDEDVLDTWFSSALWPFSTLGWPNEDSELFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 476 RYFPT--NTLVTGYDIIFFWVSRMIFQSLHFTDQRPFENVLIHGLIRDEQGRKMSKSLGN 533

Query: 285 FITINELL-----ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
            +   +++     +T +F   +  AP + L  +        +F  +    A  +L    +
Sbjct: 534 GVDPMDVIDEYGADTLRFFLTTNSAPGMDLRYIPEKLESSWNFINKIWNSARFVLMNIDE 593

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILG---- 393
           +   + +         +++LN      +  L+++ RE   N D     N    +      
Sbjct: 594 SMKYEDLT--------FDNLNLCDKWILNRLNEVIREVDINMDKFEFVNVGTELYKFIWD 645

Query: 394 ------IEVCKEHLN 402
                 IE+ K HLN
Sbjct: 646 DFCSWYIELTKVHLN 660


>gi|302807078|ref|XP_002985270.1| hypothetical protein SELMODRAFT_157130 [Selaginella moellendorffii]
 gi|300147098|gb|EFJ13764.1| hypothetical protein SELMODRAFT_157130 [Selaginella moellendorffii]
          Length = 1103

 Score = 40.0 bits (92), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 30/60 (50%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI +
Sbjct: 669 FDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIRD 728


>gi|302755993|ref|XP_002961420.1| hypothetical protein SELMODRAFT_77212 [Selaginella moellendorffii]
 gi|300170079|gb|EFJ36680.1| hypothetical protein SELMODRAFT_77212 [Selaginella moellendorffii]
          Length = 1096

 Score = 40.0 bits (92), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 30/60 (50%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI +
Sbjct: 670 FDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIRD 729


>gi|222148975|ref|YP_002549932.1| arginyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|254782937|sp|B9JXE6|SYR_AGRVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221735961|gb|ACM36924.1| arginyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 585

 Score = 40.0 bits (92), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 50/111 (45%), Gaps = 22/111 (19%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI---- 332
           KMSK +G+F+T+ +++E     GR      +R  ML     EP+DF   ++TE       
Sbjct: 399 KMSKRSGDFVTLRDVVEEV---GRD----SVRFMMLYRKSSEPLDFDFAKVTEQSKDNPV 451

Query: 333 ---------LLSKWPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLA 372
                     +S + Q   + G ID  P VL A    +   S +Q + KLA
Sbjct: 452 FYVQYAHARCMSIFRQAREAFGDIDLSPDVLEAAVTGITEPSEVQLIAKLA 502


>gi|302773323|ref|XP_002970079.1| hypothetical protein SELMODRAFT_410808 [Selaginella moellendorffii]
 gi|300162590|gb|EFJ29203.1| hypothetical protein SELMODRAFT_410808 [Selaginella moellendorffii]
          Length = 1108

 Score = 40.0 bits (92), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 24/60 (40%), Positives = 30/60 (50%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI +
Sbjct: 678 FDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIRD 737


>gi|239993317|ref|ZP_04713841.1| isoleucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 939

 Score = 40.0 bits (92), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 21/147 (14%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFT 323
           H   ++  GRKMSKS GN +   E+  T K G     A ++RL +  T YR  I   D  
Sbjct: 595 HGFTVDAHGRKMSKSVGNVVAPQEV--TNKLG-----ADILRLWVASTDYRGEIAVSDEI 647

Query: 324 VQRLTE--------AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
           ++R  +        A  LL+     S    + +  +++    D   V+  +AL +   E+
Sbjct: 648 LKRAADGYRRVRNTARFLLANLNGFSVEDAVAEEDMVAL---DRWIVARAKALQEELIEA 704

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLN 402
             N+DLL +     H   IE+   +L+
Sbjct: 705 YDNYDLLVVSQKLTHFCSIELGSFYLD 731


>gi|23099516|ref|NP_692982.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746073|sp|Q8EPN2|SYV_OCEIH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22777745|dbj|BAC14017.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 883

 Score = 40.0 bits (92), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 58/137 (42%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W++   +   W S   W     GW  E SA   
Sbjct: 419 GHRIPAWYHKETKEIYVGKEAPADIENWEQDEDVLDTWFSSALWPFSTMGWPNEDSADLK 478

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     ++   G D+IF      I QS      +   +  +H    + +GRKMSKS GN
Sbjct: 479 RYFPT--NVLVTGYDIIFFWVSRMIFQSKEFMNEKPFEDTLLHGLIRDADGRKMSKSLGN 536

Query: 285 FITINELLETKKFGGRS 301
            +   +++E  K+G  S
Sbjct: 537 GVDPMDVIE--KYGADS 551


>gi|123473252|ref|XP_001319815.1| leucyl-tRNA synthetase  [Trichomonas vaginalis G3]
 gi|121902607|gb|EAY07592.1| leucyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 1040

 Score = 39.7 bits (91), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 17/26 (65%), Positives = 21/26 (80%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLE 293
           NGFLNL  +KMSKS GNF+T+ E +E
Sbjct: 691 NGFLNLNNKKMSKSEGNFLTVVESIE 716


>gi|56459820|ref|YP_155101.1| methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|68565965|sp|Q5R0G6|SYM_IDILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56178830|gb|AAV81552.1| Methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 677

 Score = 39.7 bits (91), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 11/79 (13%)

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           W  +  A   H++GK         D+I+ H     A    AD  + T N+W H GF+ + 
Sbjct: 281 WQADSEAELYHFIGK---------DIIYFHSLFWPAMLKGADFRQPT-NVWAH-GFITVN 329

Query: 275 GRKMSKSNGNFITINELLE 293
           G KMSKS G FI     LE
Sbjct: 330 GTKMSKSKGTFIKARTYLE 348


>gi|256761215|ref|ZP_05501795.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256682466|gb|EEU22161.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|299822786|ref|ZP_07054672.1| valine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816315|gb|EFI83553.1| valine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 884

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHKK          PAD   W++   +   W S   W     GW    +    
Sbjct: 418 GHRIPAWYHKKTGELYVGTEAPADLENWEQDEDVLDTWFSSGLWPFSTMGWPDTENEDYK 477

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     ++   G D+IF      I QS      +   +  +H    + EGRKMSKS GN
Sbjct: 478 HFFPT--NVLVTGYDIIFFWVSRMIFQSLEFTGHKPFNDTLLHGLVRDAEGRKMSKSLGN 535

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 536 GVDPIEVID--KYGADS 550


>gi|255974415|ref|ZP_05425001.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|307281862|ref|ZP_07562078.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|255967287|gb|EET97909.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|306503893|gb|EFM73114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|315150958|gb|EFT94974.1| valyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|295114302|emb|CBL32939.1| valyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|257080637|ref|ZP_05574998.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|307290155|ref|ZP_07570074.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|256988667|gb|EEU75969.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|306498783|gb|EFM68281.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|255970840|ref|ZP_05421426.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256958166|ref|ZP_05562337.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860819|ref|ZP_07106906.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307275085|ref|ZP_07556239.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899334|ref|ZP_07758668.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312952220|ref|ZP_07771097.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|255961858|gb|EET94334.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256948662|gb|EEU65294.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849858|gb|EFK77608.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306508203|gb|EFM77319.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310629807|gb|EFQ13090.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293536|gb|EFQ72092.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315036220|gb|EFT48152.1| valyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315154542|gb|EFT98558.1| valyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315160097|gb|EFU04114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315169319|gb|EFU13336.1| valyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315174736|gb|EFU18753.1| valyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|323478896|gb|ADX78335.1| valyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEVPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|229547604|ref|ZP_04436329.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548188|ref|ZP_04436913.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|256852478|ref|ZP_05557854.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257091151|ref|ZP_05585512.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902616|ref|ZP_07761821.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229306667|gb|EEN72663.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229307294|gb|EEN73281.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256712332|gb|EEU27364.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256999963|gb|EEU86483.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633954|gb|EFQ17237.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315030884|gb|EFT42816.1| valyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315163283|gb|EFU07300.1| valyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578975|gb|EFU91166.1| valyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|167636213|ref|ZP_02394517.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688689|ref|ZP_02879894.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254687052|ref|ZP_05150910.1| valyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741600|ref|ZP_05199287.1| valyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528434|gb|EDR91202.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667375|gb|EDT18133.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 881

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSFGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|307288317|ref|ZP_07568312.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306500703|gb|EFM70025.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165976|gb|EFU09993.1| valyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|227518203|ref|ZP_03948252.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074359|gb|EEI12322.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 880

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEAPADSENWVQDSDVLDTWFSSALWPFSTMGWPDEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|323697808|ref|ZP_08109720.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457740|gb|EGB13605.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 938

 Score = 39.7 bits (91), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 10/67 (14%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFT 323
           H   ++ EGRKMSKS GN +   E+++  KFG     A ++R+ +  ++Y+E I   D T
Sbjct: 596 HGYVVDAEGRKMSKSIGNVLAPQEIID--KFG-----AEILRMWVSASNYQEDIRISDET 648

Query: 324 VQRLTEA 330
           + RL +A
Sbjct: 649 LSRLVDA 655


>gi|309803792|ref|ZP_07697878.1| DALR domain protein [Lactobacillus iners LactinV 11V1-d]
 gi|308164201|gb|EFO66462.1| DALR domain protein [Lactobacillus iners LactinV 11V1-d]
          Length = 110

 Score = 39.7 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 20/112 (17%)

Query: 357 NDLNTVSAIQALHKLAREST----------KN-HDLLPIFNASAHILGIEVCKEHLNKNI 405
           +D N  +A+  +H+L               KN  D + + +    I G+++  E  N + 
Sbjct: 3   DDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDEWLLIFGVKITTEMENDD- 61

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
              ++KLV +R +  + K ++++D IR +L +KG ILED   P      TRW
Sbjct: 62  --TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILED--TPQG----TRW 105


>gi|254757634|ref|ZP_05209661.1| valyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
          Length = 881

 Score = 39.7 bits (91), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|30264526|ref|NP_846903.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529989|ref|YP_021338.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187350|ref|YP_030602.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321827|ref|ZP_00394786.1| COG0525: Valyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872012|ref|ZP_02216653.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167640706|ref|ZP_02398966.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708361|ref|ZP_02898805.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653987|ref|ZP_02936028.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567025|ref|ZP_03019941.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218905660|ref|YP_002453494.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817238|ref|YP_002817247.1| valyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229093554|ref|ZP_04224656.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229600610|ref|YP_002868742.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724614|ref|ZP_05186397.1| valyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736562|ref|ZP_05194268.1| valyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254754802|ref|ZP_05206837.1| valyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|81581271|sp|Q81LD3|SYV_BACAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|30259184|gb|AAP28389.1| valine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505137|gb|AAT33813.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181277|gb|AAT56653.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712302|gb|EDR17838.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511278|gb|EDR86664.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126736|gb|EDS95619.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172081042|gb|EDT66120.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562016|gb|EDV15985.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218536093|gb|ACK88491.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227005238|gb|ACP14981.1| valine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228689884|gb|EEL43689.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229265018|gb|ACQ46655.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 881

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|301055965|ref|YP_003794176.1| valyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378134|gb|ADK07038.1| valyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 881

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|228917096|ref|ZP_04080654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228935777|ref|ZP_04098589.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823834|gb|EEM69654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842514|gb|EEM87604.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 867

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|49478642|ref|YP_038508.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394711|sp|Q6HD68|SYV_BACHK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49330198|gb|AAT60844.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 881

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|257417812|ref|ZP_05594806.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257159640|gb|EEU89600.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 880

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|196034490|ref|ZP_03101899.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228948172|ref|ZP_04110456.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993032|gb|EDX56991.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228811530|gb|EEM57867.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 881

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|29377395|ref|NP_816549.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227554378|ref|ZP_03984425.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|75541540|sp|Q82ZW6|SYV_ENTFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29344862|gb|AAO82619.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227176497|gb|EEI57469.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315576283|gb|EFU88474.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582775|gb|EFU94966.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 880

 Score = 39.3 bits (90), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W + + +   W S   W     GW  E S    
Sbjct: 414 GHQIPAWYHKETGEMYVGMEEPADSENWVQDSDVLDTWFSSALWPFSTMGWPNEASEDYQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPTSTLVTG--YDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 532 GIDPMDVIE--KYGA 544


>gi|229032112|ref|ZP_04188090.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729202|gb|EEL80200.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 867

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEEPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|196039248|ref|ZP_03106554.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029875|gb|EDX68476.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 881

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|118479624|ref|YP_896775.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196044847|ref|ZP_03112081.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225866439|ref|YP_002751817.1| valyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229186699|ref|ZP_04313858.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118418849|gb|ABK87268.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196024335|gb|EDX63008.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789413|gb|ACO29630.1| valine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596802|gb|EEK54463.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 881

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|172058142|ref|YP_001814602.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990663|gb|ACB61585.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 878

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W++   +   W S   W     GW  E +A   
Sbjct: 413 GHRIPAWYHKETGEVYVGKEAPADLENWEQDNDVLDTWFSSALWPFSTMGWPNEGAADYQ 472

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      +   G D+I       I QS          ++ IH    + EGRKMSKS GN
Sbjct: 473 KYFPTSTLV--TGYDIIAFWVSRMIFQSYEFTGERPFNDVLIHGLIRDSEGRKMSKSLGN 530

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 531 GIDPMDVIE--KYGADS 545


>gi|317153419|ref|YP_004121467.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943670|gb|ADU62721.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 942

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 10/67 (14%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFT 323
           H   ++ +GRKMSKS GN I   E+++  KFG     A ++R+ +  ++Y+E I   D T
Sbjct: 596 HGYVVDADGRKMSKSIGNVIAPQEIID--KFG-----AEILRMWVSASNYQEDIRISDET 648

Query: 324 VQRLTEA 330
           + RL +A
Sbjct: 649 LNRLVDA 655


>gi|309804780|ref|ZP_07698844.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165890|gb|EFO68109.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 879

 Score = 39.3 bits (90), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+KK          P D   W +   +   W S   W     GW  E +A   
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 529 GIDPMDVVE--KYGADS 543


>gi|309803196|ref|ZP_07697293.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164704|gb|EFO66954.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 879

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+KK          P D   W +   +   W S   W     GW  E +A   
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 529 GIDPMDVVE--KYGADS 543


>gi|116333862|ref|YP_795389.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099209|gb|ABJ64358.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 888

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+K         K P D   W++   +   W S   W     GW  E SA   
Sbjct: 421 GHRIPAWYNKQTGEVYVDTKAPKDIENWEQDPDVLDTWFSSALWPFSTMGWPDEDSADFK 480

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      + G   D+IF      + QS          N+ +H    + EGRKMSKS GN
Sbjct: 481 RYFPTSTLVTG--YDIIFFWVSRMMFQSLEFTGKRPFKNVLLHGLIRDEEGRKMSKSLGN 538

Query: 285 FITINELLETKKFGGRS 301
            I   E+++  K+G  +
Sbjct: 539 GIDPMEVID--KYGADA 553


>gi|325911674|ref|ZP_08174081.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476440|gb|EGC79599.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 879

 Score = 39.3 bits (90), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+KK          P D   W +   +   W S   W     GW  E +A   
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 529 GIDPMDVVE--KYGADS 543


>gi|259501662|ref|ZP_05744564.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191130|ref|ZP_07267384.1| valyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806332|ref|ZP_07700345.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309807726|ref|ZP_07701660.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809959|ref|ZP_07703807.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871976|ref|ZP_07732058.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874665|ref|ZP_07734689.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921098|ref|ZP_08277621.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259166947|gb|EEW51442.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167316|gb|EFO69482.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308168986|gb|EFO71070.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169747|gb|EFO71792.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311089895|gb|EFQ48315.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311092553|gb|EFQ50915.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|328935005|gb|EGG31494.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 879

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+KK          P D   W +   +   W S   W     GW  E +A   
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 529 GIDPMDVVE--KYGADS 543


>gi|315653725|ref|ZP_07906645.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325913051|ref|ZP_08175424.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|315489087|gb|EFU78729.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325477731|gb|EGC80870.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 879

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+KK          P D   W +   +   W S   W     GW  E +A   
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 529 GIDPMDVVE--KYGADS 543


>gi|312871640|ref|ZP_07731732.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|311092865|gb|EFQ51217.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 879

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+KK          P D   W +   +   W S   W     GW  E +A   
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 529 GIDPMDVVE--KYGADS 543


>gi|312873260|ref|ZP_07733316.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091271|gb|EFQ49659.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 879

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+KK          P D   W +   +   W S   W     GW  E +A   
Sbjct: 411 GHRIPAWYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSSALWPFSTLGWPDEEAADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  S
Sbjct: 529 GIDPMDVVE--KYGADS 543


>gi|257874768|ref|ZP_05654421.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257808934|gb|EEV37754.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 881

 Score = 38.9 bits (89), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 53/138 (38%), Gaps = 13/138 (9%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W++   +   W S   W     GW  E +    
Sbjct: 414 GHQIPAWYHKETGEMYVGLEAPADAENWQQDPDVLDTWFSSALWPFSTMGWPDETNEDFQ 473

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          N+ IH    + +GRKMSKS GN
Sbjct: 474 RYFPT--NTLVTGYDIIFFWVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGN 531

Query: 285 FITINELLETKKFGGRSW 302
            I   E++E        W
Sbjct: 532 GIDPMEVIEQYGADALRW 549


>gi|309776468|ref|ZP_07671454.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915859|gb|EFP61613.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 875

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E + +  
Sbjct: 412 GHRIPAWYHKETGEIYVGMQAPADIDNWVQDEDVLDTWFSSALWPFSTLGWPQETADLKR 471

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           ++     D+   G D+IF        Q+  C   R  K  ++ IH    + +GRKMSKS 
Sbjct: 472 YFPN---DVLVTGYDIIFFWVARMAFQTRYCMNSRPFK--DVLIHGLVRDAQGRKMSKSL 526

Query: 283 GNFI 286
           GN I
Sbjct: 527 GNGI 530


>gi|296424993|ref|XP_002842028.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638285|emb|CAZ86219.1| unnamed protein product [Tuber melanosporum]
          Length = 547

 Score = 38.9 bits (89), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 18/63 (28%), Positives = 34/63 (53%)

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
            I  ++ +K++G     AP++  A+L    + PI+F V  +   +I+ S  PQ+   KG+
Sbjct: 162 AIRTVIASKQYGNEDLLAPLVAQAVLAVLPKNPINFNVDNIRVVKIMGSSLPQSRVVKGM 221

Query: 347 IDP 349
           + P
Sbjct: 222 VFP 224


>gi|58261734|ref|XP_568277.1| leucine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134118365|ref|XP_772196.1| hypothetical protein CNBM1150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254804|gb|EAL17549.1| hypothetical protein CNBM1150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230450|gb|AAW46760.1| leucine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1114

 Score = 38.9 bits (89), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 36/69 (52%), Gaps = 4/69 (5%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITIN 289
            D+   G DLI P+H         A   EK     +  NG L L G+KMSKS GNF+T+ 
Sbjct: 704 LDVRSSGKDLI-PNHLTFWVYCHAALFPEKHWPKAVRANGHLMLNGKKMSKSTGNFLTMK 762

Query: 290 ELLETKKFG 298
           E   TKK+G
Sbjct: 763 EA--TKKYG 769


>gi|313885106|ref|ZP_07818858.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619797|gb|EFR31234.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 877

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 52/138 (37%), Gaps = 13/138 (9%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          PAD   W R + +   W S   W     GW  +      
Sbjct: 412 GHQIPAWYHKETGEVYVGEEAPADEENWDRDSDVLDTWFSSALWPFSTMGWPDKSQNDYQ 471

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      +   G D+IF      I QS          N+ +H    + EGRKMSKS GN
Sbjct: 472 RYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGQRPFKNVLLHGLIRDEEGRKMSKSLGN 529

Query: 285 FITINELLETKKFGGRSW 302
            I   +++E        W
Sbjct: 530 GIDPMDVIEEYGVDALRW 547


>gi|229152660|ref|ZP_04280848.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630806|gb|EEK87447.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 867

 Score = 38.9 bits (89), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          P D   W +   +   W S   W     GW  E SA   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPVDIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|229169200|ref|ZP_04296914.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614266|gb|EEK71377.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 881

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 KFYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 534 GIDPMDVIE--KYGA 546


>gi|116205303|ref|XP_001228462.1| hypothetical protein CHGG_10535 [Chaetomium globosum CBS 148.51]
 gi|88176663|gb|EAQ84131.1| hypothetical protein CHGG_10535 [Chaetomium globosum CBS 148.51]
          Length = 1120

 Score = 38.5 bits (88), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 2/34 (5%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           NG L L G KMSKS GNF+T+N++++  K+G  +
Sbjct: 745 NGHLQLNGEKMSKSTGNFMTLNDVVQ--KYGADA 776


>gi|260654931|ref|ZP_05860419.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630246|gb|EEX48440.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 918

 Score = 38.5 bits (88), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 7/51 (13%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
           H  F++ EGRKMSKS GN ++  +++E  K+G     A ++RL +  T YR
Sbjct: 592 HGFFMDGEGRKMSKSLGNVVSAQKIVE--KYG-----ADILRLWVASTDYR 635


>gi|91782348|ref|YP_557554.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123063115|sp|Q143I7|SYM_BURXL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91686302|gb|ABE29502.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 710

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           N++ H GFL ++G KMSKS G FIT   ++ET
Sbjct: 334 NVFAH-GFLTVDGAKMSKSRGTFITAQSVIET 364


>gi|296162307|ref|ZP_06845101.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295887461|gb|EFG67285.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 710

 Score = 38.1 bits (87), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 1/32 (3%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           N++ H GFL ++G KMSKS G FIT   ++ET
Sbjct: 334 NVFAH-GFLTVDGAKMSKSRGTFITAQSVIET 364


>gi|229087021|ref|ZP_04219175.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696284|gb|EEL49115.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 881

 Score = 38.1 bits (87), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 40/135 (29%), Positives = 52/135 (38%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E      
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNENDEDFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   E++E  K+G 
Sbjct: 534 GIDPMEVIE--KYGA 546


>gi|229013673|ref|ZP_04170802.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135303|ref|ZP_04264098.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648172|gb|EEL04212.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747595|gb|EEL97469.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 867

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 KFYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|307728927|ref|YP_003906151.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583462|gb|ADN56860.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 719

 Score = 38.1 bits (87), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           N++ H GFL ++G KMSKS G FIT    +ET
Sbjct: 334 NVFAH-GFLTVDGAKMSKSRGTFITAQSFIET 364


>gi|315282473|ref|ZP_07870879.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613881|gb|EFR87619.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 883

 Score = 38.1 bits (87), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         K P +   W++   +   W S   W     GW    S    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLAEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFK 476

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     +    G D+IF      I QS          +  IH    + EGRKMSKS GN
Sbjct: 477 HFFPT--NTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDXEGRKMSKSLGN 534

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 535 GVDPIEVID--KYGADS 549


>gi|229062152|ref|ZP_04199476.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717135|gb|EEL68811.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 867

 Score = 38.1 bits (87), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADLENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 462 KFYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|159158351|gb|ABW94430.1| CysS [Treponema paraluiscuniculi]
 gi|159158353|gb|ABW94431.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158355|gb|ABW94432.1| CysS [Treponema pallidum subsp. endemicum]
 gi|159158357|gb|ABW94433.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158359|gb|ABW94434.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158361|gb|ABW94435.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158363|gb|ABW94436.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158365|gb|ABW94437.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158367|gb|ABW94438.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158369|gb|ABW94439.1| CysS [Treponema pallidum subsp. pertenue str. Gauthier]
 gi|159158371|gb|ABW94440.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158373|gb|ABW94441.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158375|gb|ABW94442.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158377|gb|ABW94443.1| CysS [Treponema pallidum subsp. endemicum]
 gi|159158379|gb|ABW94444.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158381|gb|ABW94445.1| CysS [Treponema pallidum subsp. pallidum str. Mexico A]
 gi|159158383|gb|ABW94446.1| CysS [Treponema pallidum subsp. pallidum str. Nichols]
 gi|159158385|gb|ABW94447.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158387|gb|ABW94448.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158389|gb|ABW94449.1| CysS [Treponema paraluiscuniculi]
 gi|159158391|gb|ABW94450.1| CysS [Treponema paraluiscuniculi]
 gi|159158393|gb|ABW94451.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158395|gb|ABW94452.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158397|gb|ABW94453.1| CysS [Treponema pallidum]
          Length = 55

 Score = 38.1 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMG-----TRVPEKYHKKNPADFILW 194
           A   + FD  S P+Y SF    +++ + G      RV    HK++  DF+LW
Sbjct: 1   AGGNVYFDVRSFPSYESFGSAAVEDVQEGEDAARARVAHDTHKRDARDFVLW 52


>gi|66808675|ref|XP_638060.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996834|sp|Q54N83|SYLC_DICDI RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|60466511|gb|EAL64563.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1058

 Score = 38.1 bits (87), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 15/21 (71%), Positives = 18/21 (85%)

Query: 268 NGFLNLEGRKMSKSNGNFITI 288
           NGF+NL G KMSKS GNF+T+
Sbjct: 702 NGFVNLNGEKMSKSTGNFLTL 722


>gi|315124324|ref|YP_004066328.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018046|gb|ADT66139.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 206

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 54/199 (27%), Positives = 79/199 (39%), Gaps = 41/199 (20%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS  N   I + L  K+F G +     +R  +L +HYR    +++  L  A+  L K+
Sbjct: 1   MSKSLNNSFFIKDAL--KEFMGEA-----LRFYLLSSHYRSHFKYSLSDLENAKKRLDKF 53

Query: 338 PQTSTS-----------------KGIIDPAVLSALYNDLNTVSAIQALH--------KLA 372
            +                     K  I   +L  L +DLN   A+  L         +L 
Sbjct: 54  YRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISKALALLDDFISSANLELD 113

Query: 373 RESTKN---HDLLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMK 423
           +ES       ++    +  A I G       L      +K     IEKL+ ER    K K
Sbjct: 114 KESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEEREEIEKLILERTEAKKNK 173

Query: 424 KFSSADYIRKQLESKGFIL 442
            F++AD IR+QL SK   L
Sbjct: 174 DFNTADAIREQLNSKKITL 192


>gi|237734819|ref|ZP_04565300.1| valyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382147|gb|EEO32238.1| valyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 874

 Score = 37.7 bits (86), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 94/256 (36%), Gaps = 40/256 (15%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G +VP  YHK+          PAD   WK+   +   W S   W     GW    S +  
Sbjct: 412 GHQVPAWYHKETGEVYVGKNPPADLENWKQDEDVLDTWFSSALWPFSTLGWPNTDSELFK 471

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          ++ IH    + +GRKMSKS GN
Sbjct: 472 RYFPT--NTLVTGYDIIFFWVSRMIFQSLHFTEERPFEHVLIHGLIRDEQGRKMSKSLGN 529

Query: 285 FITINELL-----ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
            +   +++     +T +F   +  AP + L  +        +F  +    A  +L     
Sbjct: 530 GVDPMDVIDEYGADTLRFFLTTNSAPGMDLRYIPEKLEASWNFINKIWNSARFVLM---- 585

Query: 340 TSTSKGIIDPAVLSAL-YNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILG--- 393
                 I D      L +++LN      +  L+++ RE   N D     N  + +     
Sbjct: 586 -----NIDDEMKFEELSFDNLNLCDKWILNRLNEVIREVDINMDKFEFVNVGSELYKFIW 640

Query: 394 -------IEVCKEHLN 402
                  IE+ K HLN
Sbjct: 641 DDFCSWYIELTKVHLN 656


>gi|310778463|ref|YP_003966796.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747786|gb|ADO82448.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 931

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 14/128 (10%)

Query: 266 IHNGFLN-LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           + +GF+N  EG+KMSKS GN ++ +++++T       + A ++RL      YRE +  + 
Sbjct: 590 LTHGFVNDGEGKKMSKSTGNVMSPDDVIKT-------YGADILRLWCASVDYREDVKISE 642

Query: 325 QRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKN 378
             L +      +   T+     +    DP      Y++L  +   A+  L  L R+ T+N
Sbjct: 643 NILKQMAEAYRRVRNTARYILGNTNDFDPIKDRVSYDELPEIDRWAMHKLETLKRKVTEN 702

Query: 379 HDLLPIFN 386
           ++    +N
Sbjct: 703 YNKYEFYN 710


>gi|167755851|ref|ZP_02427978.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
 gi|167704790|gb|EDS19369.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
          Length = 873

 Score = 37.7 bits (86), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 94/256 (36%), Gaps = 40/256 (15%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G +VP  YHK+          PAD   WK+   +   W S   W     GW    S +  
Sbjct: 411 GHQVPAWYHKETGEVYVGKNPPADLENWKQDEDVLDTWFSSALWPFSTLGWPNTDSELFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          ++ IH    + +GRKMSKS GN
Sbjct: 471 RYFPT--NTLVTGYDIIFFWVSRMIFQSLHFTEERPFEHVLIHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELL-----ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
            +   +++     +T +F   +  AP + L  +        +F  +    A  +L     
Sbjct: 529 GVDPMDVIDEYGADTLRFFLTTNSAPGMDLRYIPEKLEASWNFINKIWNSARFVLM---- 584

Query: 340 TSTSKGIIDPAVLSAL-YNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILG--- 393
                 I D      L +++LN      +  L+++ RE   N D     N  + +     
Sbjct: 585 -----NIDDEMKFEELSFDNLNLCDKWILNRLNEVIREVDINMDKFEFVNVGSELYKFIW 639

Query: 394 -------IEVCKEHLN 402
                  IE+ K HLN
Sbjct: 640 DDFCSWYIELTKVHLN 655


>gi|85110062|ref|XP_963218.1| hypothetical protein NCU09463 [Neurospora crassa OR74A]
 gi|135140|sp|P10857|SYLC_NEUCR RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|168832|gb|AAA33593.1| leucyl-tRNA synthetase [Neurospora crassa]
 gi|28924888|gb|EAA33982.1| hypothetical protein NCU09463 [Neurospora crassa OR74A]
 gi|38524246|emb|CAE75711.1| leucine--tRNA ligase, cytosolic [Neurospora crassa]
          Length = 1123

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 2/34 (5%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           NG L L G KMSKS GNF+T+++++  KK+G  +
Sbjct: 748 NGHLQLNGEKMSKSTGNFMTLDDVV--KKYGADA 779


>gi|289620721|emb|CBI52731.1| unnamed protein product [Sordaria macrospora]
          Length = 1105

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 24/32 (75%), Gaps = 2/32 (6%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           NG L L G KMSKS GNF+T+++++  KK+G 
Sbjct: 730 NGHLQLNGEKMSKSTGNFMTLDDVV--KKYGA 759


>gi|213404928|ref|XP_002173236.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001283|gb|EEB06943.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 1112

 Score = 37.7 bits (86), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITIN 289
           FDI   G DL+ P+H      +  A   EK     I  NG L + G KMSKS GNF+T++
Sbjct: 693 FDIRVSGKDLV-PNHLTFCLYTHAAIFDEKFWPKGIRANGHLLMNGEKMSKSTGNFMTLH 751

Query: 290 ELLETKKFG 298
           E    KK+G
Sbjct: 752 E--ACKKYG 758


>gi|313897678|ref|ZP_07831220.1| valine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957630|gb|EFR39256.1| valine--tRNA ligase [Clostridium sp. HGF2]
          Length = 874

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 53/124 (42%), Gaps = 18/124 (14%)

Query: 176 GTRVPEKYHKK---------NPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+         +P D   W +   +   W S   W     GW  E   ++ 
Sbjct: 412 GHRIPAWYHKETGEIYVGMEDPQDLENWIQDEDVLDTWFSSALWPFSTLGWPKETDDLNR 471

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           ++     D+   G D+IF        Q+  C  +R  K  ++ IH    + +GRKMSKS 
Sbjct: 472 YFPN---DVLVTGYDIIFFWVARMAFQTRYCMKNRPFK--DVLIHGLVRDAQGRKMSKSL 526

Query: 283 GNFI 286
           GN I
Sbjct: 527 GNGI 530


>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 925

 Score = 37.7 bits (86), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 69/149 (46%), Gaps = 16/149 (10%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            +  H   L+ +GRKMSKS GN +  + ++  KK+G     A ++RL +    YR+ +  
Sbjct: 589 TVLTHGFVLDGKGRKMSKSMGNVVAPDAII--KKYG-----ADILRLWVAAEDYRDDLRI 641

Query: 321 -DFTVQRLTEAEILLSKWPQTSTSKGI-IDPAVLSALYNDL-----NTVSAIQALHKLAR 373
            D  + RL E+   +    +         +P   + LY D+       ++   A  K   
Sbjct: 642 SDEIINRLAESYRRIRNTARYMLGNLYDFNPLTDAILYGDMLEFDRYALARYHAFEKRVL 701

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           ++ +N++   I++A  +   +++  ++L+
Sbjct: 702 DAYENYEFHVIYHACNNFCSVDMSAQYLD 730


>gi|145606256|ref|XP_365730.2| hypothetical protein MGG_02432 [Magnaporthe oryzae 70-15]
 gi|145013967|gb|EDJ98608.1| hypothetical protein MGG_02432 [Magnaporthe oryzae 70-15]
          Length = 1106

 Score = 37.7 bits (86), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 7/44 (15%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           NG L + G KMSKS GNF+T++E   T+K+G     A  +R+A+
Sbjct: 729 NGHLMMNGEKMSKSTGNFMTLDEA--TRKYG-----ADALRMAI 765


>gi|332638500|ref|ZP_08417363.1| valyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 887

 Score = 37.7 bits (86), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 101/262 (38%), Gaps = 39/262 (14%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          P D   W++ + +   W S   W     GW  E +A   
Sbjct: 419 GHQIPAWYHKQTGEMYVGMEAPEDIENWEQDSDVLDTWFSSALWPFSTMGWPDEDAADFK 478

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      + QS          N+ IH    + +GRKMSKS GN
Sbjct: 479 RYFPT--NTLVTGYDIIFFWVARMMFQSKEFTGRRPFKNVLIHGLIRDEQGRKMSKSLGN 536

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID--FTVQRLTEAEILLSK-WPQTS 341
            I   +++E  K+G     A  +R   L T     +D  F+  ++  A   ++K W  + 
Sbjct: 537 GIDPMDVIE--KYG-----ADALRW-FLATGSTPGLDVRFSYTKMDSAWNFINKIWNASR 588

Query: 342 TSKGIIDPAVLSALYNDLNTVSA-----IQALHKLARESTKNHDLLPIFNASAHILG--- 393
                +D    + L  DL+ ++      +  L++     TKN D      A   +     
Sbjct: 589 YVILNLDDETKAELPADLSVLTLADKWILSRLNETIASVTKNFDKFEFGEAGRSLYNFIW 648

Query: 394 -------IEVCKEHLNKNISIA 408
                  IE+ KE LN N   A
Sbjct: 649 NDFADWYIEMTKETLNGNDEAA 670


>gi|320588787|gb|EFX01255.1| leucyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 1106

 Score = 37.7 bits (86), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 19/82 (23%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-------MTHYREPI 320
           NG L + G+KMSKS GNF+T+ E   T+KFG     A   R+A+          ++ E +
Sbjct: 730 NGHLLVNGQKMSKSTGNFLTLRE--STEKFG-----ADATRIALADAGDGIEDANFEETV 782

Query: 321 -DFTVQRLTEAEILLSKWPQTS 341
            + T+ RL E    L KW Q +
Sbjct: 783 ANATILRLYE----LRKWAQET 800


>gi|85712085|ref|ZP_01043138.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694075|gb|EAQ32020.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 680

 Score = 37.4 bits (85), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 37/79 (46%), Gaps = 11/79 (13%)

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           W  + +A   H++GK         D+I+ H     A    A +  +  N+W H GF+ + 
Sbjct: 281 WQADSTAEVYHFIGK---------DIIYFHSLFWPAMLKGA-QFRQPTNVWAH-GFITVN 329

Query: 275 GRKMSKSNGNFITINELLE 293
           G KMSKS G FI     L+
Sbjct: 330 GTKMSKSKGTFIKARTYLD 348


>gi|213025899|ref|ZP_03340346.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 52

 Score = 37.4 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           S CA   E   N W+H+G + ++  KMSKS GNF T+ ++L+
Sbjct: 2   STCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLK 42


>gi|293390593|ref|ZP_06634927.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951127|gb|EFE01246.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 686

 Score = 37.4 bits (85), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 11/72 (15%)

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WH +  A   H++GK         D+++ H     A    AD   K +NI++H G++ + 
Sbjct: 281 WHKDSDAELYHFIGK---------DIMYFHSLFWPAMLEGAD-FRKPSNIFVH-GYVTVN 329

Query: 275 GRKMSKSNGNFI 286
           G KMSKS G FI
Sbjct: 330 GEKMSKSRGTFI 341


>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511506|sp|C5CHA1|SYI_KOSOT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 921

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 63/144 (43%), Gaps = 35/144 (24%)

Query: 266 IHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           I +GF+N E GRKMSKS GN +   E+    K+G     A ++RL +  ++Y+E I  ++
Sbjct: 580 ITHGFINDEQGRKMSKSLGNAVDPQEI--NNKYG-----AEILRLWVASSNYQEDIRISM 632

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS----------------AIQAL 368
             + +         Q    K I +   L  L  +L+  S                AI  L
Sbjct: 633 NIIQQ---------QIENYKKIRN--TLRYLLGNLSDYSPQDSVPYEELLELDKWAIMKL 681

Query: 369 HKLARESTKNHDLLPIFNASAHIL 392
           HKL R+ T+ +D    +     IL
Sbjct: 682 HKLIRDVTRYYDRYEFYKVFQSIL 705


>gi|46123263|ref|XP_386185.1| hypothetical protein FG06009.1 [Gibberella zeae PH-1]
          Length = 1116

 Score = 37.4 bits (85), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/34 (52%), Positives = 24/34 (70%), Gaps = 2/34 (5%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           NG L L G KMSKS GNF+T+ +L  T+K+G  +
Sbjct: 740 NGHLMLNGEKMSKSTGNFMTLRDL--TQKYGADA 771


>gi|308174506|ref|YP_003921211.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607370|emb|CBI43741.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554425|gb|AEB24917.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912829|gb|AEB64425.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 880

 Score = 37.4 bits (85), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          P D   W++ + +   W S   W     GW  E +    
Sbjct: 415 GHRIPAWYHKETKEVYVGLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFK 474

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 475 RYYST--DVLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGN 532

Query: 285 FITINELLETKKFGGRS 301
            +   ++++  K+G  S
Sbjct: 533 GVDPMDVID--KYGADS 547


>gi|154686944|ref|YP_001422105.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154352795|gb|ABS74874.1| ValS [Bacillus amyloliquefaciens FZB42]
          Length = 880

 Score = 37.4 bits (85), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          P D   W++ + +   W S   W     GW  E +    
Sbjct: 415 GHRIPAWYHKETKEVYVGLEAPEDSENWEQDSDVLDTWFSSALWPFSTMGWPDENAEDFK 474

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 475 RYYST--DVLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLIRDEQGRKMSKSLGN 532

Query: 285 FITINELLETKKFGGRS 301
            +   ++++  K+G  S
Sbjct: 533 GVDPMDVID--KYGADS 547


>gi|291333442|gb|ADD93144.1| putative tRNA synthetases class I I L M and V [uncultured archaeon
           MedDCM-OCT-S05-C57]
          Length = 953

 Score = 37.4 bits (85), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           +D+   G DLI  H    +         E     +  NG++ ++G KMSKS GNF T+ E
Sbjct: 581 YDLRVSGKDLIQNHLSFSLYNHTAMFEKEMWPKGFAVNGWVLVDGEKMSKSKGNFFTLKE 640

Query: 291 LLETKKFGGRSWPAPVIRLAM 311
           L+        ++ A V+R  +
Sbjct: 641 LV-------TNYSADVVRFTL 654


>gi|163791284|ref|ZP_02185698.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873425|gb|EDP67515.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 877

 Score = 37.0 bits (84), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK +         P D   W +   +   W S   W     GW  E S    
Sbjct: 410 GHRIPAWYHKTSGELYVGMEAPEDSENWMQDPDVLDTWFSSALWPFSTMGWPDEESEDFK 469

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      + QS          N+ IH    + EGRKMSKS GN
Sbjct: 470 RYFPT--NTLVTGYDIIFFWVSRMMFQSLEFTGKRPFNNVLIHGLIRDTEGRKMSKSLGN 527

Query: 285 FITINELLETKKFGGRS 301
            I   +++E  K+G  +
Sbjct: 528 GIDPMDVIE--KYGADA 542


>gi|47096717|ref|ZP_00234302.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898281|ref|ZP_05258205.1| valyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912226|ref|ZP_05262238.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936554|ref|ZP_05268251.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014901|gb|EAL05849.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609148|gb|EEW21756.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590201|gb|EFF98535.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 883

 Score = 37.0 bits (84), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         K P +   W++   +   W S   W     GW    S    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     +    G D+IF      I QS          +  IH    + EGRKMSKS GN
Sbjct: 477 HFFPT--NTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGN 534

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 535 GVDPIEVID--KYGADS 549


>gi|325989806|ref|YP_004249505.1| Valyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574891|emb|CBZ40551.1| Valyl-tRNA synthetase [Mycoplasma suis]
          Length = 833

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           F     G D++FP     I  S   +      NI++H    N +G KMSKS GN I   E
Sbjct: 436 FSTLVSGKDILFPWISRMIYLSLHFNAKPPFKNIFLHGILRNSQGEKMSKSLGNGILPEE 495

Query: 291 LLETKKFGGRSWPAPVIRLAMLM-THYREPIDFT 323
           L          + + VIR A L  TH+   I ++
Sbjct: 496 LYS-------KYSSDVIRFAFLSNTHFDRDIKYS 522


>gi|254831953|ref|ZP_05236608.1| valyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 883

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         K P +   W++   +   W S   W     GW    S    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     +    G D+IF      I QS          +  IH    + EGRKMSKS GN
Sbjct: 477 HFFPT--NTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGN 534

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 535 GVDPIEVID--KYGADS 549


>gi|254828213|ref|ZP_05232900.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600602|gb|EEW13927.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 883

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         K P +   W++   +   W S   W     GW    S    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     +    G D+IF      I QS          +  IH    + EGRKMSKS GN
Sbjct: 477 HFFPT--NTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGN 534

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 535 GVDPIEVID--KYGADS 549


>gi|284801943|ref|YP_003413808.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995085|ref|YP_003416853.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057505|gb|ADB68446.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060552|gb|ADB71491.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 883

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         K P +   W++   +   W S   W     GW    S    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     +    G D+IF      I QS          +  IH    + EGRKMSKS GN
Sbjct: 477 HFFPT--NTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGN 534

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 535 GVDPIEVID--KYGADS 549


>gi|224499788|ref|ZP_03668137.1| valyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 883

 Score = 37.0 bits (84), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         K P +   W++   +   W S   W     GW    S    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     +    G D+IF      I QS          +  IH    + EGRKMSKS GN
Sbjct: 477 HFFPT--NTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGN 534

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 535 GVDPIEVID--KYGADS 549


>gi|16803592|ref|NP_465077.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501508|ref|ZP_03669815.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508987|sp|Q8Y6X9|SYV_LISMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16410981|emb|CAC99630.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 883

 Score = 37.0 bits (84), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         K P +   W++   +   W S   W     GW    S    
Sbjct: 417 GHRIPAWYHKETGEIYVGEKEPENLSEWEQDEDVLDTWFSSALWPFSTMGWPDTESPDFQ 476

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           H+     +    G D+IF      I QS          +  IH    + EGRKMSKS GN
Sbjct: 477 HFFPT--NTLVTGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGN 534

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 535 GVDPIEVID--KYGADS 549


>gi|228929504|ref|ZP_04092524.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228830184|gb|EEM75801.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 867

 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W +   +   W S   W     GW  E +A   
Sbjct: 402 GHRIPAWYHKETGEVYVGTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFK 461

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +G KMSKS GN
Sbjct: 462 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGHKMSKSLGN 519

Query: 285 FITINELLETKKFGG 299
            I   +++E  K+G 
Sbjct: 520 GIDPMDVIE--KYGA 532


>gi|229543663|ref|ZP_04432723.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328083|gb|EEN93758.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 881

 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          P D   W++   +   W S   W     GW  E +    
Sbjct: 415 GHRIPAWYHKETGEVYVDTEPPRDIENWEQDPDVLDTWFSSALWPFSTMGWPDEEAKDYK 474

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 475 RYYPT--DTLVTGYDIIFFWVSRMIFQGLAFTGKRPFKDVLIHGLVRDEQGRKMSKSLGN 532

Query: 285 FITINELLETKKFGGRS 301
            +   E+++  K+G  S
Sbjct: 533 GVDPMEVID--KYGADS 547


>gi|300214744|gb|ADJ79160.1| Valyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 886

 Score = 37.0 bits (84), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G ++P  YHK+          P D   W++ + +   W S   W     GW    S    
Sbjct: 419 GHQIPAWYHKETGEIYVGEEAPEDIENWEQDSDVLDTWFSSALWSFSTMGWPDTESPDFK 478

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS    +     N+ IH    + +GRKMSKS GN
Sbjct: 479 RYFPT--NTLVTGYDIIFFWVSRMIFQSVEFTKRRPFKNVLIHGLIRDEQGRKMSKSLGN 536

Query: 285 FITINELLETKKFGGRS 301
            I   ++++  K+G  +
Sbjct: 537 GIDPMDVID--KYGADA 551


>gi|15615600|ref|NP_243904.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|12585349|sp|Q9K8G8|SYV_BACHD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10175660|dbj|BAB06757.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 880

 Score = 37.0 bits (84), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          P D   WK+   +   W S   W     GW  E +    
Sbjct: 415 GHRIPAWYHKETGEVYVGHEAPQDIDNWKQDEDVLDTWFSSALWPFSTMGWPDEEAPDYK 474

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + EG+KMSKS GN
Sbjct: 475 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGQPPFKDVLIHGLVRDAEGQKMSKSLGN 532

Query: 285 FITINELLETKKFGG 299
            +   E+++  K+G 
Sbjct: 533 GVDPMEVID--KYGA 545


>gi|41615033|ref|NP_963531.1| leucyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|48428516|sp|P61760|SYL_NANEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|40068757|gb|AAR39092.1| NEQ239 [Nanoarchaeum equitans Kin4-M]
          Length = 977

 Score = 37.0 bits (84), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 15/26 (57%), Positives = 20/26 (76%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLE 293
           +GF+ + G KMSKS GNFITI E ++
Sbjct: 690 SGFVTVNGEKMSKSKGNFITIREAIQ 715


>gi|295698760|ref|YP_003603415.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157378|gb|ADD79823.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 543

 Score = 36.6 bits (83), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 1/37 (2%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           +  K  NI++H G L ++G+KMSKS GNFI+ N  L+
Sbjct: 310 KYRKPNNIFVH-GHLTVDGQKMSKSKGNFISANSYLK 345


>gi|303389510|ref|XP_003072987.1| leucyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302131|gb|ADM11627.1| leucyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 873

 Score = 36.6 bits (83), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 24/34 (70%), Gaps = 2/34 (5%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           NG+L L   KMSKS+GNF+T++E L   KFG  S
Sbjct: 535 NGYLMLNSEKMSKSSGNFLTVDESL--AKFGVSS 566


>gi|321456139|gb|EFX67254.1| hypothetical protein DAPPUDRAFT_189542 [Daphnia pulex]
          Length = 965

 Score = 36.6 bits (83), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           GK  D +  G+D      ++ +  S  +       NI++H   L+ EGRKMSKS GN I 
Sbjct: 570 GKQADFYLEGIDQFGGWFQSSLLTSVASSGHAPYKNIFVHGFVLDHEGRKMSKSLGNVID 629

Query: 288 INELLETKKFGGRSWPA 304
            + +L+     G+  PA
Sbjct: 630 PHLILDGD---GKKQPA 643


>gi|261418346|ref|YP_003252028.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767695|ref|YP_004133196.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374803|gb|ACX77546.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112561|gb|ADU95053.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 880

 Score = 36.6 bits (83), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGW-HIECSAMS 223
           G R+P  YHK+          PAD   W++   +   W S   W     GW  +E     
Sbjct: 415 GHRIPAWYHKETGEIYVDHEPPADIENWEQDPDVLDTWFSSALWPFSTMGWPDVESPDYK 474

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            +Y     D+   G D+IF      I Q           ++ IH    + +GRKMSKS G
Sbjct: 475 RYY---PTDVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLG 531

Query: 284 NFI 286
           N +
Sbjct: 532 NGV 534


>gi|321265103|ref|XP_003197268.1| leucine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317463747|gb|ADV25481.1| Leucine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 1114

 Score = 36.6 bits (83), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 2/31 (6%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           NG L L G+KMSKS GNF+T+ E   T K+G
Sbjct: 741 NGHLMLNGKKMSKSTGNFLTMKEA--TNKYG 769


>gi|323342873|ref|ZP_08083105.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463985|gb|EFY09179.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 861

 Score = 36.6 bits (83), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 14/130 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  +HK+          P D   W++   +   W S   W     GW      +  
Sbjct: 411 GHRIPAWFHKETEEIYVGLEAPEDIENWRQDEDVLDTWFSSALWPFSTLGWPENTEDLER 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           +Y   V      G D+IF        Q+          ++ IH    + +GRKMSKS GN
Sbjct: 471 YYPTNVL---VTGYDIIFFWVARMAFQARYFTNSRPFEDVLIHGLIRDQDGRKMSKSLGN 527

Query: 285 FITINELLET 294
            +   +++ET
Sbjct: 528 GVDPMDVIET 537


>gi|171689796|ref|XP_001909838.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944860|emb|CAP70972.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1088

 Score = 36.6 bits (83), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 2/34 (5%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           NG L L G KM+KS GNF+T+++++  KK+G  +
Sbjct: 713 NGHLQLNGAKMAKSTGNFMTLDDVV--KKYGADA 744


>gi|300811354|ref|ZP_07091851.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497718|gb|EFK32743.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 879

 Score = 36.6 bits (83), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+K+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   ++++  K+G  +
Sbjct: 529 GIDPMDIID--KYGADA 543


>gi|325125475|gb|ADY84805.1| Valine-tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 879

 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+K+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   ++++  K+G  +
Sbjct: 529 GIDPMDVID--KYGADA 543


>gi|325973370|ref|YP_004250434.1| valyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651972|gb|ADX98054.1| valyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 833

 Score = 36.6 bits (83), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           F     G D++FP     I  S   +      NI++H    N +G KMSKS GN I   E
Sbjct: 436 FSTLVSGKDILFPWISRMIYLSLHFNAKPPFKNIFLHGILRNSKGEKMSKSLGNGILPEE 495

Query: 291 LLETKKFGGRSWPAPVIRLAMLM-THYREPIDFT 323
           L          + + VIR A L  TH+   I ++
Sbjct: 496 LYS-------KYSSDVIRFAFLSNTHFDRDIKYS 522


>gi|152976875|ref|YP_001376392.1| valyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025627|gb|ABS23397.1| valyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 881

 Score = 36.6 bits (83), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 54/135 (40%), Gaps = 15/135 (11%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK+          PAD   W++   +   W S   W     GW  E +    
Sbjct: 416 GHRIPAWYHKETGEVYVGTEAPADIENWEQDNDVLDTWFSSALWPFSTLGWPNEDAKDFK 475

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS GN
Sbjct: 476 RYYST--DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGN 533

Query: 285 FITINELLETKKFGG 299
            I   ++++  K+G 
Sbjct: 534 GIDPMDVID--KYGA 546


>gi|313123426|ref|YP_004033685.1| valyl-tRNA synthetase (valine--tRNA ligase) (valrs) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279989|gb|ADQ60708.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 879

 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+K+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   ++++  K+G  +
Sbjct: 529 GIDPMDVID--KYGADA 543


>gi|325684336|gb|EGD26505.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 879

 Score = 36.6 bits (83), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 56/137 (40%), Gaps = 15/137 (10%)

Query: 176 GTRVPEKYHKKN---------PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  Y+K+          PAD   W +   +   W S   W     GW  E SA   
Sbjct: 411 GHRIPAWYNKQTGEMYVGEEAPADIENWDQDQDVLDTWFSSALWPFSTLGWPDEDSADFK 470

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y     +    G D+IF      I QS          N+ +H    + +GRKMSKS GN
Sbjct: 471 RYFPT--NALVTGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDEQGRKMSKSLGN 528

Query: 285 FITINELLETKKFGGRS 301
            I   ++++  K+G  +
Sbjct: 529 GIDPMDVID--KYGADA 543


>gi|283769125|ref|ZP_06342030.1| valine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104311|gb|EFC05689.1| valine--tRNA ligase [Bulleidia extructa W1219]
          Length = 871

 Score = 36.6 bits (83), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 51/129 (39%), Gaps = 14/129 (10%)

Query: 176 GTRVPEKYHK---------KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           G R+P  YHK         + P D   W++   +   W S   W     GW  E      
Sbjct: 412 GHRIPAWYHKDTKEIYVGQEAPQDIENWRQDEDVLDTWFSSALWPFSTLGWPKETEDFKR 471

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
           +Y   +    G G D+IF        Q+          ++ +H    + +GRKMSKS GN
Sbjct: 472 YYPNSMM---GTGYDIIFFWVARMAFQARHFTGQAPFKDVVLHGLIRDAKGRKMSKSLGN 528

Query: 285 FITINELLE 293
            I   E+++
Sbjct: 529 GIDPMEVID 537


>gi|315426839|dbj|BAJ48460.1| leucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 978

 Score = 36.6 bits (83), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           NG + +EG KMSKS GNF+T+ + L           +   RLA+L++
Sbjct: 640 NGMITIEGNKMSKSRGNFVTLKQALARHG-------SDATRLALLLS 679


>gi|315428060|dbj|BAJ49648.1| leucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 978

 Score = 36.6 bits (83), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 7/47 (14%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           NG + +EG KMSKS GNF+T+ + L           +   RLA+L++
Sbjct: 640 NGMITIEGNKMSKSRGNFVTLKQALARHG-------SDATRLALLLS 679


>gi|167042850|gb|ABZ07567.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine microorganism HF4000_ANIW137J11]
          Length = 1212

 Score = 36.6 bits (83), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 32/63 (50%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           +D+   G DLI  H    +         +K    +  NG++ + G KMSKS GNF TI +
Sbjct: 840 YDLRVSGKDLIQNHLSFSLFNHTAVFSRDKWPRGFAVNGWVLVNGEKMSKSRGNFYTIRQ 899

Query: 291 LLE 293
           L++
Sbjct: 900 LID 902


Searching..................................................done


Results from round 2




>gi|254780573|ref|YP_003064986.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040250|gb|ACT57046.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 461

 Score =  709 bits (1831), Expect = 0.0,   Method: Composition-based stats.
 Identities = 461/461 (100%), Positives = 461/461 (100%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY
Sbjct: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT
Sbjct: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP
Sbjct: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL
Sbjct: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR
Sbjct: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN
Sbjct: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL
Sbjct: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP
Sbjct: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461


>gi|315121767|ref|YP_004062256.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495169|gb|ADR51768.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 461

 Score =  666 bits (1720), Expect = 0.0,   Method: Composition-based stats.
 Identities = 373/460 (81%), Positives = 418/460 (90%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+K IK+YNTL+R+  EFQAIDPSN+RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR++
Sbjct: 1   MQKNIKLYNTLKRETIEFQAIDPSNVRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRHH 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE+CVTYVRNITDIDDKIIERAR++HPSI I++AI +IT KN +QF+ DTT+L CL PT
Sbjct: 61  YGEQCVTYVRNITDIDDKIIERARRDHPSIAIDNAICMITEKNIKQFILDTTKLGCLIPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           HQPRAT +IPQMI LI+ II HGHAYE+NNEI+FDT+S PNYGS S+RKIDEQK G RVP
Sbjct: 121 HQPRATEYIPQMINLIEKIISHGHAYESNNEILFDTNSAPNYGSLSQRKIDEQKTGARVP 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           EKYHKKNPADF+LWK S+  EPGWESPWG GRPGWHIECSAMSS++LGK+FDIHGGGLDL
Sbjct: 181 EKYHKKNPADFVLWKTSSEEEPGWESPWGIGRPGWHIECSAMSSYHLGKLFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQSCCA R +K AN+WIHNGFLNLEG KMSKSNGNFITINELLETKKFGG+
Sbjct: 241 IFPHHENEIAQSCCAYRTDKIANVWIHNGFLNLEGHKMSKSNGNFITINELLETKKFGGQ 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           +WPAPVIRLAMLMT YREPIDFTVQRL EAEILLSKWP T+ S+G  DPAVLSAL+NDLN
Sbjct: 301 AWPAPVIRLAMLMTSYREPIDFTVQRLQEAEILLSKWPPTTESRGKPDPAVLSALFNDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TVSAIQALHKLARES KN DLLP FNASA+ILGIEV +E L+KN+SIAIEKLVQERL+LL
Sbjct: 361 TVSAIQALHKLARESIKNPDLLPTFNASANILGIEVREEPLSKNLSIAIEKLVQERLLLL 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K+K FS+AD IR+QLE KGF+LEDYK+P + QRMTRWKQK
Sbjct: 421 KIKNFSAADSIREQLECKGFVLEDYKDPKSKQRMTRWKQK 460


>gi|150395937|ref|YP_001326404.1| cysteinyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|187631642|sp|A6U7D9|SYC_SINMW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150027452|gb|ABR59569.1| cysteinyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 466

 Score =  638 bits (1646), Expect = 0.0,   Method: Composition-based stats.
 Identities = 276/456 (60%), Positives = 349/456 (76%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+ T+F+ IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 7   LKLYNTLTREKTDFRPIDPKNVRMYVCGPTVYDFAHIGNARPIIVFDVLFRLLRHVYGTD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI  RA +++P +P+N+AI  +T +   +F++D   L CL PT QPR
Sbjct: 67  HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTERTETRFLEDAALLGCLDPTVQPR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IP MI +I+ +I  GHAYEA  E++FDT S+  YG  S+R +DEQ+ G RV  + H
Sbjct: 127 ATENIPGMIEIIETLIAKGHAYEAEGEVLFDTRSMAEYGQLSKRNLDEQQAGARVAVEAH 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S   EPGWESPWGRGRPGWHIECSAMS  YLG+VFDIHGGG+DLIFPH
Sbjct: 187 KRNPGDFVLWKLSAGHEPGWESPWGRGRPGWHIECSAMSGRYLGEVFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN+W+HNGFL +EGRKMSKS GNFITI +LL T+KFGGR WP 
Sbjct: 247 HENEIAQSRCAHGTAVMANVWMHNGFLQVEGRKMSKSEGNFITIYDLLHTEKFGGRKWPG 306

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            V+RLAMLMTHYREPIDF+++RL EAE LLSKWP   ++ G  DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVHGSASGEADPAVVAALTDDLNTVAA 366

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           IQALH LA+++T +   L  F ASA +LG+E  +  L++ +   I+  V+ERL LLK K 
Sbjct: 367 IQALHALAQKATADARHLGAFAASAALLGVEPKEIELDEAVVQEIDGRVRERLELLKSKN 426

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462


>gi|307946682|ref|ZP_07662017.1| cysteinyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770346|gb|EFO29572.1| cysteinyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 477

 Score =  636 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 267/458 (58%), Positives = 346/458 (75%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ NTL R   +F  I  +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLL + YG
Sbjct: 19  KGLRVTNTLTRTKEDFVPISDANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLNHLYG 78

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA ++HP +P+N+AI+ +T +   QF  D  RL CL PTH+
Sbjct: 79  GENVTYARNITDVDDKINARALRDHPDLPLNEAIAKVTERTANQFHVDIARLGCLEPTHE 138

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  MI +I  +I  G+AY A+ E++FDT+S+P YG  S+R +DEQK G R+  +
Sbjct: 139 PRATGHIGGMIAMIDTLIAKGNAYVASGEVLFDTTSMPAYGGLSKRNLDEQKAGARIAVE 198

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HKKNPADF+LWK S+  EPGW+SPWGRGRPGWHIECS MS H+LGKVFDIHGGGLDLIF
Sbjct: 199 AHKKNPADFVLWKLSSDEEPGWDSPWGRGRPGWHIECSVMSEHHLGKVFDIHGGGLDLIF 258

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA+  +K +N W+HNGFL +EGRKMSKS GNF TI+ELL+ + FGGR W
Sbjct: 259 PHHENEIAQSCCANGTKKMSNYWMHNGFLQVEGRKMSKSEGNFFTIHELLDDETFGGRKW 318

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           P  V+RLAMLMTHYREPIDF+ +RL EAE LLSKWP    +      A+L AL +DLNTV
Sbjct: 319 PGEVLRLAMLMTHYREPIDFSKKRLEEAERLLSKWPAPIETDAAPSEAILEALTDDLNTV 378

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
           +AIQ LH+LA E+ +N ++L +++ASA +LG++  K   ++  + +I+  V ERL  LK 
Sbjct: 379 AAIQVLHQLAAEAAQNPEMLGVYSASAALLGVQPVKADTSELDTSSIDARVSERLEQLKA 438

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K ++ AD IR +L ++G +L+D K+ + G+R+T W+ K
Sbjct: 439 KNWAEADRIRDELAAEGILLKDGKDAETGERVTTWEVK 476


>gi|307300935|ref|ZP_07580704.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|306903890|gb|EFN34476.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 466

 Score =  636 bits (1642), Expect = e-180,   Method: Composition-based stats.
 Identities = 276/456 (60%), Positives = 347/456 (76%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 7   LKLYNTLTREKADFRPIDPQNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYGAD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI  RA +++P +P+N+AI  +T K   QF++D T L CL PT QPR
Sbjct: 67  HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTEKTETQFLEDATVLGCLDPTVQPR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI +I+ +I  GHAYEA  E++FDT S+ +YG  S+R +DEQ+ G RV  + H
Sbjct: 127 ATENIAGMIEIIEKLIAKGHAYEAEGEVLFDTRSMDDYGQLSKRNLDEQQAGARVAVEAH 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  YLG VFDIHGGG+DLIFPH
Sbjct: 187 KKNPGDFVLWKLSAEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNFITI ELL T+KFGGR WP 
Sbjct: 247 HENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFITIYELLHTEKFGGRKWPG 306

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            V+RLAMLMTHYREPIDF+++RL EAE LLSKWP    + G  DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVYGDAAGEADPAVVTALADDLNTVAA 366

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           IQALH LA++++ +   L  F ASA +LG+   +  L++ +   I+  V+ERL LLK K 
Sbjct: 367 IQALHALAQKASADSRHLGTFAASAALLGLVPKEVELDEAVVHEIDGRVRERLELLKAKN 426

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462


>gi|15964864|ref|NP_385217.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307321838|ref|ZP_07601224.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|21264014|sp|Q92R20|SYC_RHIME RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15074043|emb|CAC45690.1| Probable cysteinyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306892507|gb|EFN23307.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 466

 Score =  636 bits (1641), Expect = e-180,   Method: Composition-based stats.
 Identities = 276/456 (60%), Positives = 347/456 (76%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 7   LKLYNTLTREKADFRPIDPQNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYGAD 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKI  RA +++P +P+N+AI  +T K   QF++D T L CL PT QPR
Sbjct: 67  HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTEKTETQFLEDATVLGCLDPTVQPR 126

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI +I+ +I  GHAYEA  E++FDT S+ +YG  S+R +DEQ+ G RV  + H
Sbjct: 127 ATENIAGMIEIIEKLIAKGHAYEAEGEVLFDTRSMDDYGQLSKRNLDEQQAGARVAVEAH 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  YLG VFDIHGGG+DLIFPH
Sbjct: 187 KKNPGDFVLWKLSAEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNFITI ELL T+KFGGR WP 
Sbjct: 247 HENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFITIYELLHTEKFGGRKWPG 306

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
            V+RLAMLMTHYREPIDF+++RL EAE LLSKWP    + G  DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVYGDAAGEADPAVVTALADDLNTVAA 366

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           IQALH LA++++ +   L  F ASA +LG+   +  L++ +   I+  V+ERL LLK K 
Sbjct: 367 IQALHALAQKASADSRHLGTFAASAALLGVVPKEVELDEAVVHEIDGRVRERLELLKAKN 426

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462


>gi|86357063|ref|YP_468955.1| cysteinyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|109894928|sp|Q2KAA8|SYC_RHIEC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86281165|gb|ABC90228.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 458

 Score =  628 bits (1621), Expect = e-178,   Method: Composition-based stats.
 Identities = 267/459 (58%), Positives = 340/459 (74%), Gaps = 5/459 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++K+YNTL R+ + F+ ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 4   TPELKLYNTLTREKSAFKPIDAENVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           GE  VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P+ 
Sbjct: 64  GEDHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPSV 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT++I +MI +I+ +I +GHAY A  E++FDT S+ +YG  S+R +DEQ+ G RV  
Sbjct: 124 EPRATDNIAEMIQIIEKLIGNGHAYVAAGEVLFDTKSMADYGELSKRPLDEQQAGARVAV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HKKNP DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLI
Sbjct: 184 DAHKKNPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLI 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   E  AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR 
Sbjct: 244 FPHHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRK 303

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
           WP  V+RLAMLMTHYREPIDF+++RL EAE LL+KWP         D +VL+AL +DLNT
Sbjct: 304 WPGEVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPTAEAGDAAPDESVLNALADDLNT 363

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           V+A+QALH LA+          +F ASA +LG+   K  +++  + A++ LV  RL +LK
Sbjct: 364 VAAVQALHALAQPGND-----AVFAASAVLLGVLPKKVEIDEAFAAAVDALVAMRLEVLK 418

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K F  AD IR +L +KG  L+D K+P+ G+R+T W+ K
Sbjct: 419 AKNFVEADRIRDELGAKGIQLKDGKDPETGERVTTWEVK 457


>gi|15888416|ref|NP_354097.1| cysteinyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|24418698|sp|Q8UGG4|SYC_AGRT5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15156102|gb|AAK86882.1| cysteinyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 461

 Score =  627 bits (1618), Expect = e-178,   Method: Composition-based stats.
 Identities = 276/460 (60%), Positives = 342/460 (74%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++K++NTL R+ +EF  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ 
Sbjct: 1   MSLRLKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTY RNITD+DDKI  RA +++P +P+NDAI  +T K   QF  D   L CL PT
Sbjct: 61  YGEDHVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT++I +MIYLI+ +I  GHAY+A  E++FDT S+ +YG  S+R +DEQ+ G RV 
Sbjct: 121 VEPRATDYIAEMIYLIERLIERGHAYKAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVA 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            + HKKNP DF+LWK S+  EPGWESPWG GRPGWHIECSAM+  YLG+VFDIHGGGLDL
Sbjct: 181 VEAHKKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA      AN+W+HNGF+ +EGRKMSKS GNF+TI ELL T KFGGR
Sbjct: 241 IFPHHENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGR 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            WP  V+RLAMLMTHYREPIDF+V+RL EAE LLSKWP   TS    D  VL AL +DLN
Sbjct: 301 QWPGEVLRLAMLMTHYREPIDFSVKRLEEAERLLSKWPAAETSDAAADETVLEALADDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TV+A+QALH LA  +  +   LP F ASA +LG+   K  +++ I  A++ LV+ RL +L
Sbjct: 361 TVAAVQALHALAHAANTDPSRLPAFAASAALLGVLPKKTEMDEAIVSAVDALVELRLEML 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K K F+ AD +R +L  KG  L+D K+ + G+R T W+ K
Sbjct: 421 KAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWELK 460


>gi|118588096|ref|ZP_01545506.1| cysteinyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118439718|gb|EAV46349.1| cysteinyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 471

 Score =  627 bits (1617), Expect = e-177,   Method: Composition-based stats.
 Identities = 261/458 (56%), Positives = 332/458 (72%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+ NTL R+  +F+AID  N+R+YVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 13  KGLKLTNTLTRQKEDFRAIDDGNVRLYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY RNITD+DDKI  RA ++ P +P+N+AI+ +T K   QF KD   L  L P+ +
Sbjct: 73  ADHVTYARNITDVDDKINARALRDFPDLPLNEAIARVTQKTADQFHKDIRSLGVLEPSIE 132

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  M+ +I  +I  GHAY+A  E++FDT S+P+YG  S+RK+DEQ  G R+   
Sbjct: 133 PRATQHIGGMVEMIAALIEKGHAYQAGGEVLFDTQSMPDYGGLSKRKLDEQLAGARIAVD 192

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECS MS+ +LG+VFDIHGGGLDLIF
Sbjct: 193 AHKKNPGDFVLWKLSSDEEPGWDSPWGRGRPGWHIECSVMSAQHLGEVFDIHGGGLDLIF 252

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  AN W+HNGFL +EGRKMSKS GNF TI ELLET  FGGR W
Sbjct: 253 PHHENEIAQSRCAHGTKVMANYWMHNGFLQVEGRKMSKSEGNFFTIQELLETDSFGGRKW 312

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           P  V+RLAMLMT+YREPIDF+ ++L EAE LL++WP    +       VL AL +DLNT 
Sbjct: 313 PGEVLRLAMLMTNYREPIDFSKRKLEEAENLLARWPDPVETDAAPAAEVLDALLDDLNTA 372

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
            AIQALH LA E++K+   L +++ASA +LG+   K  L+     AI+  +++RL  L  
Sbjct: 373 GAIQALHALAVEASKDPAKLTVYSASAALLGVHPVKADLSGVDEAAIQAAIEKRLEALNA 432

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K ++ AD IR  L S+G +L+D K+ + G R+T W+ K
Sbjct: 433 KNWAEADAIRDDLTSQGILLKDSKDSETGARVTTWEVK 470


>gi|325292453|ref|YP_004278317.1| Cysteinyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060306|gb|ADY63997.1| Cysteinyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 461

 Score =  626 bits (1616), Expect = e-177,   Method: Composition-based stats.
 Identities = 275/460 (59%), Positives = 342/460 (74%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++K++NTL R+ TEF  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVLYRLLR+ 
Sbjct: 1   MSLRLKLHNTLTREKTEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLYRLLRHV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTY RNITD+DDKI  RA +++P +P+NDAI  +T K   QF +D   L CL PT
Sbjct: 61  YGESHVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHEDVAALGCLQPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT++I +MI +I+ +I  GHAY A  E++FDT S+ +YG  S+R +DEQ+ G RV 
Sbjct: 121 VEPRATDYIAEMIDIIEKLIARGHAYAAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVA 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            + HKK P DF+LWK S+  EPGWESPWGRGRPGWHIECSAM+  YLG+VFDIHGGGLDL
Sbjct: 181 VEAHKKTPGDFVLWKLSSDNEPGWESPWGRGRPGWHIECSAMAGRYLGEVFDIHGGGLDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA   +  AN+W+HNGF+ +EGRKMSKS GNF+TI ELL T+KFGGR
Sbjct: 241 IFPHHENEIAQSRCAHGTQVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTEKFGGR 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            WP  V+RLAMLMTHYREPIDF+V+RL EAE LL+KWP    S    D  VL AL +DLN
Sbjct: 301 QWPGEVLRLAMLMTHYREPIDFSVKRLEEAERLLAKWPAAEASDAAPDETVLDALADDLN 360

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           TV+A+QALH LA  +  +   LP F ASA +LG+   K  +++ I  A++ LVQ RL +L
Sbjct: 361 TVAAVQALHALAHAANTDPARLPAFAASAALLGVLPKKAEVDEAIVSAVDALVQLRLEML 420

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K K F+ AD +R +L  KG  L+D K+ + G+R T W+ K
Sbjct: 421 KAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWELK 460


>gi|254504528|ref|ZP_05116679.1| cysteinyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222440599|gb|EEE47278.1| cysteinyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 475

 Score =  626 bits (1615), Expect = e-177,   Method: Composition-based stats.
 Identities = 268/462 (58%), Positives = 335/462 (72%), Gaps = 4/462 (0%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+ NTL R+  +F AID SN+R+YVCGPTVYDFAHIGNARP IVFDVLYRLLR+ YG
Sbjct: 13  KGLKLTNTLTRQKEDFCAIDDSNVRLYVCGPTVYDFAHIGNARPAIVFDVLYRLLRHLYG 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P+N+AI+++T K   Q+ KD   L CL PT Q
Sbjct: 73  AEHVTYARNITDVDDKINARALRDYPDMPLNEAIALVTKKTADQYQKDVAALGCLEPTVQ 132

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN----NEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PRAT HI  M+ +I+ +I  GHAY A      E++FDT S+PNYG  S+RK+DEQ  G R
Sbjct: 133 PRATEHIDGMVKMIEQLIEKGHAYVAETPEGGEVLFDTVSMPNYGGLSKRKLDEQIAGAR 192

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +    HKKNP DF+LWK S+P EPGW+SPWGRGRPGWHIECS MS H+LGKVFDIHGGGL
Sbjct: 193 IAVDSHKKNPGDFVLWKLSSPEEPGWDSPWGRGRPGWHIECSVMSEHHLGKVFDIHGGGL 252

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQSCCA+  +  +N W+HNGF+ +EGRKMSKS GNF TI+ELLET+ FG
Sbjct: 253 DLIFPHHENEIAQSCCANGTKTMSNYWVHNGFVQVEGRKMSKSEGNFFTIHELLETENFG 312

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
           GR WP  V+RLAMLMTHY+EPIDF+V++L EAE LL KWP    +       VL A+ +D
Sbjct: 313 GRKWPGEVLRLAMLMTHYKEPIDFSVRKLEEAENLLGKWPDLVETDAAPAADVLDAMNDD 372

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI 418
           LNT +AIQALH LA E+ K+   L  F+ASA +LG++     ++     AI   +  RL 
Sbjct: 373 LNTAAAIQALHGLAGEANKDPHKLAEFSASAALLGLKPVAADMSGIDETAIATAITARLE 432

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            L  K ++ AD IR +L S+G  L+D K+ + G R+T W  K
Sbjct: 433 ALNGKNWAEADRIRDELASQGIALKDSKDSETGARVTTWDLK 474


>gi|116251309|ref|YP_767147.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|123384854|sp|Q1MJ22|SYC_RHIL3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115255957|emb|CAK07038.1| putative cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 463

 Score =  625 bits (1612), Expect = e-177,   Method: Composition-based stats.
 Identities = 270/459 (58%), Positives = 344/459 (74%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++K+YNTL R+ + F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLRY Y
Sbjct: 4   TPELKLYNTLTREKSVFSPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRYVY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           GE  VTY RNITD+DDKI  RA ++HP +P+NDAI  +T K   QF  D   L CL P  
Sbjct: 64  GEDHVTYARNITDVDDKINARALRDHPGLPLNDAIRAVTEKTETQFHADVAELGCLEPNF 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT++I +M  +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G R+  
Sbjct: 124 EPRATDNIVEMTEIIEKLIGNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARIAV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HKKNP DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLI
Sbjct: 184 DAHKKNPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGDVFDIHGGGLDLI 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNF+TI+ELL+T+ FGGR 
Sbjct: 244 FPHHENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFVTIHELLQTETFGGRK 303

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
           WP  V+RLAMLMTHYREPIDF+++RL EAE LL+KWP    S    D +VL+AL +DLNT
Sbjct: 304 WPGQVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPAAEASDAAPDESVLNALSDDLNT 363

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           V+A+QALH LA+ +  +     +F A+A +LG+   K  +++ ++ A++ LV  RL +LK
Sbjct: 364 VAAVQALHALAQAAHGDPTARAVFAATADLLGLLPKKMEIDEAVASAVDALVAMRLEMLK 423

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 424 AKNFTEADKIRDELTAKGIQLKDGKDAVTGERVTTWEVK 462


>gi|241203922|ref|YP_002975018.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857812|gb|ACS55479.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 463

 Score =  623 bits (1606), Expect = e-176,   Method: Composition-based stats.
 Identities = 267/459 (58%), Positives = 343/459 (74%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++K+YNTL R+ + F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 4   TPELKLYNTLTREKSVFSPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           GE  VTY RNITD+DDKI  RA ++HP +P+NDAI  +T K   QF  D   L CL P+ 
Sbjct: 64  GEDHVTYARNITDVDDKINARALRDHPGLPLNDAIRAVTEKTETQFHTDVAELGCLEPSF 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT++I +M  +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G R+  
Sbjct: 124 EPRATDNIVEMTEIIEKLIGNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARIAV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HKK+P DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLI
Sbjct: 184 DAHKKHPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGNVFDIHGGGLDLI 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   E  AN+W+HNGFL +EGRKMSKS GNF+TI+ELL T+ FGGR 
Sbjct: 244 FPHHENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFVTIHELLHTETFGGRK 303

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
           WP  V+RLAMLMTHYREPIDF+++RL EAE LL+KWP         D +VL+AL +DLNT
Sbjct: 304 WPGQVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPAAEVGDAAPDESVLNALSDDLNT 363

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           V+A+QALH LA+ +  +     +F A+A +LG+   K  +++ ++ A++ LV  RL +LK
Sbjct: 364 VAAVQALHALAQAAHTDPTASAVFAATADLLGLLPKKMEIDEAVASAVDALVAMRLEMLK 423

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 424 AKNFTEADKIRDELTAKGIQLKDGKDAVTGERVTTWEVK 462


>gi|227821436|ref|YP_002825406.1| cysteinyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340435|gb|ACP24653.1| cysteinyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 463

 Score =  610 bits (1573), Expect = e-172,   Method: Composition-based stats.
 Identities = 270/458 (58%), Positives = 344/458 (75%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL R+  +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 2   PTLKLYNTLTREKADFRPIDPLNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTY RNITD+DDKI  RA +++P +P+N+AI  +T K   QF+ D T L CL PT Q
Sbjct: 62  ESRVTYARNITDVDDKINARALRDYPGLPLNEAIRRVTEKTETQFLDDATVLGCLEPTVQ 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  I +M+ +I+ ++  GHAY+A  E++FDT S+ +YG  SRR +DEQ+ G RV  +
Sbjct: 122 PRATESIAEMVEIIEKLLAKGHAYQAEGEVLFDTKSMRDYGQLSRRNLDEQQAGARVAVE 181

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HKKNP DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLIF
Sbjct: 182 AHKKNPGDFVLWKLSQEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGLDLIF 241

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  AN+W+HNGFL +EGRKMSKS GNF+TI ELL T+KFGGR W
Sbjct: 242 PHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGRKMSKSEGNFVTIYELLHTEKFGGRQW 301

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           P  V+RLAMLMTHYREPIDF+++RL EAE LLS+WP    + G  D A+++AL +DLNTV
Sbjct: 302 PGEVLRLAMLMTHYREPIDFSIKRLEEAEHLLSRWPVPGEAAGEADAAIVAALADDLNTV 361

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
           +AIQALH LA++++ +   L  F ASA +LG+   +  L+  +   I+  V+ RL LLK 
Sbjct: 362 AAIQALHALAQKASVDAQYLGAFAASAALLGVLPKEIELDVAVVEEIDGRVRARLELLKA 421

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K ++ AD IR  L ++G  L+D K+P+ G+R+T W+ K
Sbjct: 422 KNYAEADAIRADLLARGIQLKDGKDPETGERVTTWEVK 459


>gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 459

 Score =  609 bits (1572), Expect = e-172,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFAETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAVRLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GPNGTTWRKQ 459


>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 482

 Score =  609 bits (1570), Expect = e-172,   Method: Composition-based stats.
 Identities = 184/483 (38%), Positives = 262/483 (54%), Gaps = 46/483 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KI+NTL R+   F+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR   
Sbjct: 22  KNMLKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLG 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  
Sbjct: 82  YD--LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDF 133

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT+HIP++I +++ +I  GHAY AN  +++FD  S   YG  SR+ +D+ + G R+ 
Sbjct: 134 EPRATHHIPEIIEIVEKLIARGHAYVANNGDVMFDVESFKEYGKLSRQDLDQLQAGARIE 193

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 194 INEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 253

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA    +  N WIH+G + ++  KMSKS  NF TI ++L        
Sbjct: 254 MFPHHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVLN------- 305

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAV 351
            + A  +R  +L  HYR  ++++ + L  A+  L +                      A 
Sbjct: 306 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVEAF 365

Query: 352 LSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVC 397
             A+ +D NT +A+  L ++ARE          K + L       A ILG+      +  
Sbjct: 366 REAMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLCELAGILGLLQQDPEKFL 425

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +   + +    IE L+++R      K +++AD  R +L + G +LED      G   T W
Sbjct: 426 QAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLED------GPNGTTW 479

Query: 458 KQK 460
           +++
Sbjct: 480 RKQ 482


>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 459

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWRKQ 459


>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 459

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 262/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G+R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGSRIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWRKQ 459


>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|81336945|sp|Q4QPG7|SYC_HAEI8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 459

 Score =  607 bits (1566), Expect = e-171,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARAAKDWATADAARNELIAMGIVLED------GPNGTTWRKQ 459


>gi|37679546|ref|NP_934155.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|37198290|dbj|BAC94126.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 509

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 179/485 (36%), Positives = 256/485 (52%), Gaps = 47/485 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY 
Sbjct: 47  IEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYL 106

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  +T+VRNITDIDDKII+RA +        +    +T +   +   D   L    P 
Sbjct: 107 GYD--LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFDALNMKRPD 158

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +PRAT +I ++I L++ +I  G AY A+  +++F+ +    YG  S++ +D+ + G RV
Sbjct: 159 VEPRATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARV 218

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             +  K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG D
Sbjct: 219 DVETAKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSD 278

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L       
Sbjct: 279 LQFPHHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG------ 331

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPA 350
             + A  +R  ++  HYR  ++++ + L +A   L +                       
Sbjct: 332 -HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAPAGGEEYVSR 390

Query: 351 VLSALYNDLNTVSAIQALHKLAREST--KNHDLL------PIFNASAHILGIEVCKEHL- 401
             +A+ +D NT  A   L  +ARE    K  DL        +    A ++GI        
Sbjct: 391 FTAAMNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAF 450

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 N +    IE L++ R      K +++AD  R +L   G +LED      G   T
Sbjct: 451 LKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPDGT 504

Query: 456 RWKQK 460
            W++K
Sbjct: 505 TWRRK 509


>gi|319784480|ref|YP_004143956.1| cysteinyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170368|gb|ADV13906.1| cysteinyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 478

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 258/476 (54%), Positives = 326/476 (68%), Gaps = 20/476 (4%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + +++YNTL R   +F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5   SQGLRLYNTLTRTKEDFVPIDPLNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLY 64

Query: 62  GEKCVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           G+  VTYVRNITD+DDKI  RA           ++ +N+AI  +T K   QF  D   L 
Sbjct: 65  GQTHVTYVRNITDVDDKINARALRDFGGEIASGTLSLNEAIRRVTEKTADQFHSDVAVLG 124

Query: 116 CLAPTHQPRATNHIP-------QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
           CL PT +PRAT  +         MI LIQ++I  GHAY A  E++FDT+S+P+YG  S+R
Sbjct: 125 CLEPTVEPRATEFVEPRADGKVDMITLIQSLIERGHAYVAAGEVLFDTASMPDYGQLSKR 184

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            +DEQ+ G RV    HKKNP DF+LWK S+P EPGW SPWGRGRPGWHIECSAMS+ YLG
Sbjct: 185 NLDEQQAGARVAVDAHKKNPGDFVLWKLSSPEEPGWNSPWGRGRPGWHIECSAMSAAYLG 244

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           +VFDIHGGGLDLIFPHHENEIAQS CA   E  ANIW+HNGFL +EG+KMSKS GNF +I
Sbjct: 245 EVFDIHGGGLDLIFPHHENEIAQSRCAHGTEMMANIWMHNGFLQVEGQKMSKSLGNFYSI 304

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSK 344
           NELLET+ FGGR WP  V+RLAMLMTHYREPIDF+V++L EAE  L KW +      T+ 
Sbjct: 305 NELLETETFGGRKWPGEVLRLAMLMTHYREPIDFSVRKLEEAENTLRKWKRGADLAPTAA 364

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
           G +   ++ AL +DL T +A Q L +LA E+   +D      AS   LG +V    +++ 
Sbjct: 365 GQVPVEIIDALSDDLATYAAFQVLTQLAGEAMDGNDAAASLKASLLFLGFDVASAKVDEG 424

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               + K + +RL  +  K ++ AD IR  L ++G  L+D K+P  G+R+T W+ K
Sbjct: 425 ---HVGKAIAKRLAFIAAKSWAEADRIRDDLLAQGIQLKDGKDPVTGERITTWEVK 477


>gi|15602810|ref|NP_245882.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|13431884|sp|P57890|SYC_PASMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|12721267|gb|AAK03029.1| CysS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 459

 Score =  607 bits (1565), Expect = e-171,   Method: Composition-based stats.
 Identities = 188/480 (39%), Positives = 260/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  H+G+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA      +  N+  + +  K   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRA------LENNETCNQLVEKMIAEMHKDFDALNVLRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +I+ +I   HAY  AN +++FD  S   YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIVN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL FP
Sbjct: 174 VKKNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N WIH+G + ++  KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSCCAHSGR-YVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +                      A   A
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLNLAHSALERLYTALRGTDPTAVATEGQNYLAAFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  AI  L ++ARE          K + L       A ILG+      +  +  
Sbjct: 346 MDDDFNTPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQSG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K ++SAD  R +L   G +LED  N       T W+++
Sbjct: 406 SDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVN------GTTWRKQ 459


>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
 gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 459

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 260/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVVFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N +    IE L+++R      K + +AD  R +L + G +LED      G   T W+++
Sbjct: 406 SNDDEVAKIEALIKQRNEARAAKDWPAADAARNELTAMGIVLED------GPNGTTWRKQ 459


>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 460

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 180/481 (37%), Positives = 257/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I+   + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           +  +R  ++  HYR  ++++ + L +A   L +   +     +  PA            A
Sbjct: 286 SETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLTTPAAGGEEYVSRFTEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLP------IFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    K  D+        +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRIKAEDIAAASALGSLMRELADVIGILYQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|312885230|ref|ZP_07744908.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309367089|gb|EFP94663.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 459

 Score =  606 bits (1562), Expect = e-171,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 263/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I+   I MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII RA +       N++   +T +   +  +D   L    P  +P+
Sbjct: 61  -LTFVRNITDIDDKIITRANEN------NESCEALTERLIGEMHRDFDALNMKRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATEYIQEIIQLVEKLIERGFAYVADNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           +  +R  ++  HYR  ++++ + L +A   L +   +     +  PA            A
Sbjct: 286 SETVRYFLMSGHYRSQLNYSEENLNQARAGLERLYTSLRGLDLTVPAADGEEYVSRFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRVKATDNEHASALGSLLRELADVIGILHQDPEAFLQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +K+    IE L++ R      K +++AD  R +L + G +LED      G   T W++K
Sbjct: 406 DDKDQVAEIEALIKLRNDSRAAKDWATADVARDKLTAMGIVLED------GPSGTTWRRK 459


>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
 gi|188022312|gb|EDU60352.1| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
          Length = 494

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 181/485 (37%), Positives = 258/485 (53%), Gaps = 49/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I+NTL R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD + R LRY   
Sbjct: 32  QMLQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGY 91

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  + YVRN+TDIDDKII+RA +       N+ +  +T++   +  KD   L  L P  +
Sbjct: 92  D--LNYVRNVTDIDDKIIKRAAEN------NETVDSLTTRMLAEMHKDFDALNILRPDSE 143

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I +   +I  GHAY A+  +++F+  +  NYG  SR+ +++ + G RV  
Sbjct: 144 PRATQHIDEIIEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEV 203

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+
Sbjct: 204 ADSKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLM 263

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        
Sbjct: 264 FPHHENEIAQSSCAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE-------Y 315

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
           +    +R  +L  HYR  +++T + L +A   L +                  I      
Sbjct: 316 YDPETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSVAPAGGEIFKKRFE 375

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
            A+ +D NT  A   L  +ARE  +         ++L       A +LG+          
Sbjct: 376 DAMNDDFNTPEAYSVLFDMAREINRLKSENKVAANELASELRKLAGVLGLLEQDPEAFLQ 435

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        IE L+++R    K K+++ AD  R +L + G +LED      G + T
Sbjct: 436 GNAQGEGDEEVAKIEALIKQRNNARKNKEWALADAARDELTAMGIVLED------GAQGT 489

Query: 456 RWKQK 460
            W++K
Sbjct: 490 TWRRK 494


>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|187631638|sp|A8FTH6|SYC_SHESH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
          Length = 459

 Score =  605 bits (1561), Expect = e-171,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RNITD+DDKII+RA +        ++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFLRNITDVDDKIIKRANENK------ESCESLTERLIGEMHRDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I   HAY + N +++F  SS P YG  S + +D+ + G RV  + 
Sbjct: 114 ATLHIPEIIDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSCCAHNT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLE-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A+  L +   +         + S          A
Sbjct: 286 AATVRYFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVEAASADEYVAKFKVA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L ++ RE          K   L       A +LGI         K  
Sbjct: 346 MDDDFNTPEAYSVLFEMVREINRLKEADNAKASSLGVKLKELADVLGILDQDVDTFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 GSTDEVAEIEALIAERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTWRKK 459


>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 461

 Score =  605 bits (1560), Expect = e-171,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWTAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|187629826|sp|A5UFP3|SYC_HAEIG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 459

 Score =  604 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 259/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVVFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +  AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEVLIKQRNEARAAKDWPVADAARNELTAMGIVLED------GPNGTTWRKQ 459


>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|166200148|sp|A4IJG8|SYC_GEOTN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
 gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 467

 Score =  604 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 177/489 (36%), Positives = 258/489 (52%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   
Sbjct: 2   SSIRLYNTLTRKKETFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV N TD+DDK+I  AR+      + +++  I  +  + + +D   L C      
Sbjct: 62  D--VTYVSNFTDVDDKLIRAARE------LGESVPAIAERFIEAYFEDIEALGCKKADIH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE + G R+   
Sbjct: 114 PRVTENIETIIEFIQALIDKGYAYEVDGDVYYRTRKFDGYGKLSHQSIDELQAGARIEVG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 174 EKKDDPLDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R  
Sbjct: 234 PHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RQI 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
              V+R  ML  HYR PI+++ + L  A   L +      +                   
Sbjct: 286 DPQVLRFFMLSVHYRHPINYSEELLESARRGLERLRTAYGNLQHRLGASTNLTDNDGEWL 345

Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                I  + +  + +D NT + I  L +LA+++              H  L  F     
Sbjct: 346 SRLADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSENVIHAFLREFEQLMD 405

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + +E L   +   IE L+++R    K + F+ AD IR +L++K  ILED      
Sbjct: 406 VLGLTLKQEEL---LDEEIEALIRQRNEARKNRDFALADRIRDELKAKNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|222085422|ref|YP_002543952.1| cysteinyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|254765171|sp|B9JCA5|SYC_AGRRK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221722870|gb|ACM26026.1| cysteinyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 463

 Score =  604 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 274/459 (59%), Positives = 343/459 (74%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++K+YNTL R+  +FQ ID  N+R+YVCGPTVYDFAHIGNARP IVFDVL+RLLR  Y
Sbjct: 4   EPQLKLYNTLTREKVDFQPIDRENVRLYVCGPTVYDFAHIGNARPAIVFDVLFRLLRQVY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           GE  VTY RNITD+DDKI  RA ++HP +P+N+AI ++T K   Q+ +DTT L CL PT 
Sbjct: 64  GENHVTYARNITDVDDKINARALRDHPGLPLNEAIRLVTEKTETQYYQDTTALGCLEPTV 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPRAT++I QMI +I+ +I  GHAY+A  E++FDT S+ +YG  S+R +DEQ+ G R+  
Sbjct: 124 QPRATDNIAQMIEIIEKLIARGHAYQAAGEVLFDTKSMADYGQLSKRNLDEQQAGARIAV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HKK+P DF+LWK S   EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLI
Sbjct: 184 DAHKKSPGDFVLWKLSAENEPGWESPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGLDLI 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   +  AN+W+HNGFL +EGRKMSKS GNF+TI ELL+T+K GGR+
Sbjct: 244 FPHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGRKMSKSEGNFVTIYELLQTEKLGGRT 303

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
           WP  V+RLAMLMTHYREPIDF+V+RL EAE LL+KWP         D  VL AL +DLNT
Sbjct: 304 WPGAVLRLAMLMTHYREPIDFSVKRLEEAERLLAKWPAADIGNAKPDATVLVALADDLNT 363

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           V AIQALH LA+ +  +  +LP+F ASA +LG+   K  ++  ++  I+  V+ RL LLK
Sbjct: 364 VVAIQALHALAQAANADASILPVFAASAALLGLLPEKVEMDDAVASEIDARVRARLELLK 423

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K F+ AD IR  L ++G  L+D K+P  G+R+T W+ K
Sbjct: 424 AKNFAEADKIRDTLLAEGIQLKDGKDPATGERITTWEVK 462


>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|61216143|sp|Q5X5P9|SYC_LEGPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 456

 Score =  604 bits (1559), Expect = e-171,   Method: Composition-based stats.
 Identities = 191/474 (40%), Positives = 260/474 (54%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +         +I  +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASER------GVSIDELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G+AY ++  ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGNAYVSDNGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L       +   
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEHH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAVLS 353
             VIR  +L +HYR P++++ + L  A+  L +  Q                        
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFNQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------VCKEHLNKNI 405
           A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +  
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEE 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 406 KLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELED------GATGTTWRR 453


>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 459

 Score =  604 bits (1558), Expect = e-171,   Method: Composition-based stats.
 Identities = 185/479 (38%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVCLKELAAVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 459

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  + P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEGMAKANGLAVRLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511845|sp|C4LG04|SYC_TOLAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 463

 Score =  604 bits (1558), Expect = e-170,   Method: Composition-based stats.
 Identities = 180/483 (37%), Positives = 257/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITD+DDKII+RA +        ++   +T +       D   L    P  +PR
Sbjct: 61  -VTFVRNITDVDDKIIKRAAENA------ESCDALTERLIGDMHADFDALKLQRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+Q+++   +AY A+  +++F   S P YG  S + I++ + G RV  + 
Sbjct: 114 ATQHIGEIITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGARVDVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 SKRNPMDFVLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHHT-PYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVL-------KVYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLS 353
           A  +R  ++  HYR P++++   L +A   L +            + +      D    +
Sbjct: 286 AETVRYFLMSGHYRSPLNYSDLNLQQARASLERLYTALRGVEDGEEQAALSAPFDERFKA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEH----- 400
           A+ +D NT  A   L  LAR+  +           L         +LG+   +       
Sbjct: 346 AMDDDFNTPEAYSVLFDLARDLNRAKQDSPADAVALAACLRRLGGVLGLLQQQPEQFLQS 405

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 +    IE L++ R      K ++ AD  R +L   G +LED      G + T W
Sbjct: 406 GAAAETDDVAEIELLIKTRNDARASKNWALADEARNKLTEMGIVLED------GPQGTTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|187629818|sp|A3N0S3|SYC_ACTP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
          Length = 459

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 459

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEVAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 466

 Score =  604 bits (1557), Expect = e-170,   Method: Composition-based stats.
 Identities = 177/489 (36%), Positives = 260/489 (53%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  +VFD + R L +   
Sbjct: 2   SSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAVVFDTIRRYLEFRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV N TD+DDK+I+ AR+      + +++  I  +  + + +D   L C      
Sbjct: 62  D--VTYVSNFTDVDDKLIKAARE------LGESVPAIAERFIEAYFEDIQALGCKKADIH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE + G R+   
Sbjct: 114 PRVTENIDAIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 174 EKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R  
Sbjct: 234 PHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------REI 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI+++ + L  A   L +     ++                   
Sbjct: 286 DPQVLRFFMLSVHYRHPINYSEELLESARRGLERLKTAYSNLQHRLQASTNLTDNDEEWV 345

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                I  + +  + +D NT + I  L +LA+++              H  L  F   A 
Sbjct: 346 SRIADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSEKVIHAFLREFEQLAD 405

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + ++ L   +   IE L+Q+R    K + F+ AD IR +L +K  ILED      
Sbjct: 406 VLGLTLKQDEL---LDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226735044|sp|B7GJ46|SYC_ANOFW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 465

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 259/489 (52%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F  ++P+ ++MYVCGPTVY++ HIGNARP IVFD + R L++   
Sbjct: 1   MSIQVYNTLTRKKEPFIPLEPNKVKMYVCGPTVYNYIHIGNARPAIVFDTIRRYLQFRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV N TD+DDK+I  AR+      + + +  I  +  + + +D T L C      
Sbjct: 61  E--VQYVSNFTDVDDKLIRAARE------LGEDVPTIAERFIEAYFEDITALGCKKADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T +I  +I  I+ +I  G+AYE + ++ + T    +YG  S + +DE K G R+   
Sbjct: 113 PRVTENIDTIIQFIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSVDELKSGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKEDPLDFALWKAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNFI +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWLHNGYINIDNEKMSKSLGNFILVHDII-------KQV 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI+++   L  A   L +      +                   
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSQPLLESARSGLERLKTAYANLKHRLESSTNLTTNDEQWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                +    +  + +D NT + I  L +LA+++                 L  F     
Sbjct: 345 AKIEELRNEFIREMDDDFNTANGIAVLFELAKQANVYLMENHTSQQVIQAFLQQFEQLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + ++ L   +   IE L+Q+R+   K + F+ AD IR +L++K  ILED      
Sbjct: 405 VLGLSLQQDEL---LDEEIEALIQQRIEARKNRDFALADRIRDELKAKNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRW++
Sbjct: 457 -PQGTRWRR 464


>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|61216117|sp|Q5L429|SYC_GEOKA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 466

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 178/489 (36%), Positives = 260/489 (53%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   
Sbjct: 2   SSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV N TD+DDK+I+ AR+      + +++  I  +  + + +D   L C      
Sbjct: 62  D--VTYVSNFTDVDDKLIKAARE------LGESVPAIAERFIEAYFEDIQALGCKKADIH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE + G R+   
Sbjct: 114 PRVTENIDTIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEIG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 174 EKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R  
Sbjct: 234 PHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------REI 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI+++ + L  A   L +     ++                   
Sbjct: 286 DPQVLRFFMLSVHYRHPINYSEELLESARRGLERLKTAYSNLQHRLQASTNLTDNDEEWV 345

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                I  + +  + +D NT + I  L +LA+++              H  L  F   A 
Sbjct: 346 SRIADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSEKVIHAFLREFEQLAD 405

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + ++ L   +   IE L+Q+R    K + F+ AD IR +L +K  ILED      
Sbjct: 406 VLGLTLKQDEL---LDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174501|sp|P43816|SYC_HAEIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
 gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 459

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 183/480 (38%), Positives = 262/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +             A            A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVATFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N +    IE L+++R      K +S+AD  R +L + G +LED      G   T W+++
Sbjct: 406 SNDDEVAKIEALIKQRNEARTAKDWSAADSARNELTAMGIVLED------GPNGTTWRKQ 459


>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 461

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 188/482 (39%), Positives = 265/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHPGIVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA + H      ++   +TS+   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRAAENH------ESCDDLTSRMLAEMYKDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I L +++I  GHAY A+  +++F   S  +YG+ SR+ + + + G RV    
Sbjct: 114 ATRHIPEIIELTESLIKRGHAYVADNGDVMFSVESDSDYGALSRQDLSQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +                  + +   + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDASVSPAGGEVFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHD------LLPIFNASAHILGIEVCKEH------ 400
           + +D NT  A   L  +ARE    K+ D      L  +    A ILG+            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINCLKSEDLSAANGLAAVLRKLAGILGLLEQDPEQFLHSG 405

Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             ++      IE L+++R    K K ++ AD  R QL   G  LED      G + T W+
Sbjct: 406 VQVDDEDIAKIEALIKQRNDARKNKDWTLADSARDQLNEMGIELED------GPQGTSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|229558613|sp|B0BPJ8|SYC_ACTPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 459

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 460

 Score =  603 bits (1556), Expect = e-170,   Method: Composition-based stats.
 Identities = 180/481 (37%), Positives = 255/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP++I L+Q +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIPEIIELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGARVDVET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K  +L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|262404192|ref|ZP_06080747.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262349224|gb|EEY98362.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 459

 Score =  603 bits (1555), Expect = e-170,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 256/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENS------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLDQLQAGARVDVEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRTVPAAGGEEYLTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMCELADVIGILYQEPEAFFQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 459

 Score =  602 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  + P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 461

 Score =  602 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA      +   +    +T +   +  KD   L    P  +PR
Sbjct: 61  -LKYVRNVTDVDDKIIKRA------LENGETCDQLTERMLAEMHKDFDSLNIARPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIPEIIEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++LE        + 
Sbjct: 234 HHENEIAQSSCAHDG-PYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLE-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                  + +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTEPQAEPAGGDVFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A  AL  LARE  +         + L       A ILG+            
Sbjct: 346 MDDDFNTPEAYSALFDLAREVNRLKSEDMAQANALAAELRKLAKILGLLEQDPEVFLQGG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL + G +LED      G + T W+
Sbjct: 406 AQADDSEVAQIEALIKQRNDARAAKDWAMADSARDQLNALGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 459

 Score =  602 bits (1554), Expect = e-170,   Method: Composition-based stats.
 Identities = 183/479 (38%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  + P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNIIRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|61216153|sp|Q5ZVY1|SYC_LEGPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 456

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 194/474 (40%), Positives = 263/474 (55%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLKPGTIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +         +I  +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASER------GVSIDELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G+AY + N ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L       +   
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEHH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------TSKGIIDP----AVLS 353
             VIR  +L +HYR P++++ + L  A+  L +  Q        T    +D         
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTEDSKLDEYWQVQFNQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------VCKEHLNKNI 405
           A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +  
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEE 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 406 KLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELED------GATGTTWRR 453


>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 459

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 178/480 (37%), Positives = 256/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L+Q +I  G AY A+  +++F+      YG  S++ +++ + G RV  + 
Sbjct: 114 ATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYLSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 485

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 181/483 (37%), Positives = 260/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+N+L ++   F+ I P ++RMYVCG TVYD+ H+G+AR ++VFD++ R LR+     
Sbjct: 25  LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGY-- 82

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII RA +      + + +  +T +  +   +D   L  L P H+PR
Sbjct: 83  RVTFVRNITDIDDKIIRRAAE------LGEPMGAVTERFIRAMHEDAEALGVLPPDHEPR 136

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I +I+ ++  GHAY A+  ++ F  SS P YG  S  + ++ + G RV    
Sbjct: 137 ATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDE 196

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGGLDL FP
Sbjct: 197 GKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFP 256

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+HNG + +   KM+KS GNF T+ E+L   +       
Sbjct: 257 HHENEIAQSECATG-HPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHR------- 308

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLS 353
           A  +RL +L +HYR P+++++  L +A+  L +                          +
Sbjct: 309 AEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEADPQGFRARFHA 368

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH---- 400
           A+ +D NT  A+  L +LARE  +               +      +LG+          
Sbjct: 369 AMDDDFNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERFLR 428

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 +    I+ LV  R    K + F+ AD IR +L  +G ILED      G + T W
Sbjct: 429 GGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILED------GPQGTTW 482

Query: 458 KQK 460
           +++
Sbjct: 483 RRE 485


>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
           furnissii NCTC 11218]
          Length = 460

 Score =  602 bits (1553), Expect = e-170,   Method: Composition-based stats.
 Identities = 181/481 (37%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENQ------ESCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L+Q +I  G AY A+  +++F+ +   +YG  S++ +D+ + G RV    
Sbjct: 114 ATAYIQEIIELVQRLIDRGFAYVADNGDVMFEVNKFDDYGKLSKQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +   +     +  PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDMTVPAAGGEEYLTRFTTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K   L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTEDTDKASALGALMRELADVIGILYQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLNEMGIVLED------GPSGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
 gi|187629845|sp|A5IBG0|SYC_LEGPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 456

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 192/474 (40%), Positives = 259/474 (54%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +         +I  +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASERDV------SIDELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G AY + N ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L       +   
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEHH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAVLS 353
             VIR  +L +HYR P++++ + L  A+  L +  Q                        
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFNQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------VCKEHLNKNI 405
           A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +  
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEE 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 406 KLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELED------GATGTTWRR 453


>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 459

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 185/479 (38%), Positives = 262/479 (54%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL+R+   F  I P+ + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA + H      +    +  +   +  KD   L    P  +PR
Sbjct: 60  HLTYVRNITDVDDKIIKRALENH------ETCEHLVDRMVAEMYKDFDALNIQRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L+Q +I +GHAY A N +++FD  S P YG  SR+ + + + G RV    
Sbjct: 114 ATHHIPEIIALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGARVEIND 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHGGA-YVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +            T+        A  +A
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLKLAHSALERLYTALRGTDANATAAGGEQFIEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L  +ARE  K                   A +LG+         +  
Sbjct: 346 MDDDFNTPGALSVLFDMARELNKLKAEQNPQTDAFAARLRELAGVLGLLYQDPETFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ++ + +  IE L+ +R      K +++AD  R +L + G ++ED      G   T W++
Sbjct: 406 MDDDETKIIETLIAQRNQARANKDWATADAARDKLAAMGVVIED------GANGTTWRK 458


>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 460

 Score =  602 bits (1552), Expect = e-170,   Method: Composition-based stats.
 Identities = 175/481 (36%), Positives = 254/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYVGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LKFVRNITDIDDKIIKRANEN------GESCESLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATEFIAEIIELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGARVDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L+        + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLD-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLSA 354
              +R  ++  HYR  ++++   L +A   L +   +     +               +A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLNQARSALERLYTSLRGLDLDAEPTGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKTVDLGQASQLGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGDNDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|187631658|sp|Q0A7N3|SYC_ALHEH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 462

 Score =  601 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 181/483 (37%), Positives = 260/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+N+L ++   F+ I P ++RMYVCG TVYD+ H+G+AR ++VFD++ R LR+     
Sbjct: 2   LHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII RA +      + + +  +T +  +   +D   L  L P H+PR
Sbjct: 60  RVTFVRNITDIDDKIIRRAAE------LGEPMGAVTERFIRAMHEDAEALGVLPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I +I+ ++  GHAY A+  ++ F  SS P YG  S  + ++ + G RV    
Sbjct: 114 ATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGGLDL FP
Sbjct: 174 GKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+HNG + +   KM+KS GNF T+ E+L   +       
Sbjct: 234 HHENEIAQSECATG-HPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHR------- 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLS 353
           A  +RL +L +HYR P+++++  L +A+  L +                          +
Sbjct: 286 AEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEADPQGFRARFHA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH---- 400
           A+ +D NT  A+  L +LARE  +               +      +LG+          
Sbjct: 346 AMDDDFNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERFLR 405

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 +    I+ LV  R    K + F+ AD IR +L  +G ILED      G + T W
Sbjct: 406 GGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILED------GPQGTTW 459

Query: 458 KQK 460
           +++
Sbjct: 460 RRE 462


>gi|22125011|ref|NP_668434.1| cysteinyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45440695|ref|NP_992234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|21957858|gb|AAM84685.1|AE013714_1 cysteine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45435553|gb|AAS61111.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
          Length = 476

 Score =  601 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 183/484 (37%), Positives = 258/484 (53%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   
Sbjct: 15  PMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +
Sbjct: 75  --SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLE 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+HI ++I + + +I  GHAY A N +++F   S P+YG  SR+ +D+ + G RV  
Sbjct: 127 PRATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEV 186

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+
Sbjct: 187 ADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLM 246

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         
Sbjct: 247 FPHHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------Y 298

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVL 352
           + A  +R  ++  HYR  ++++ + L +A   L +            T       +    
Sbjct: 299 YDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFR 358

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL--- 401
           +A+ +D NT  A   L  +ARE  +  +        L       A +LG+      L   
Sbjct: 359 TAMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQ 418

Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                + +    IE L+++R      K ++ AD  R QL   G +LED      G + T 
Sbjct: 419 GGAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTT 472

Query: 457 WKQK 460
           W++K
Sbjct: 473 WRRK 476


>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 459

 Score =  601 bits (1551), Expect = e-170,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ + P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRAAEN------NESCKSLTERLIGEMHRDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   +AY ++  +++F  SS   YG  S + I++ + G RV  + 
Sbjct: 114 ATQHMPEIIDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVL-------KHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-IDPA--------VLSA 354
           A  IR  +L  HYR  ++++   L +A+  L +   +     + ++PA          +A
Sbjct: 286 AGTIRYFLLSGHYRSQLNYSEDNLKQAKSALDRLYTSLKGLDLNVEPADASEFVVKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE    K  DL             A +LG+         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRVKGSDLAQASAMGVKLKELAGVLGLLDQDVDIFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 GSDDEVAQIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPSGTTWRKK 459


>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|187631636|sp|A3QFX9|SYC_SHELP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 459

 Score =  601 bits (1550), Expect = e-170,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 256/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA          ++   +T + TQ+   D   L    P  +PR
Sbjct: 61  -VNFHRNITDVDDKIIKRA------TENGESCDALTERLTQEMYHDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ ++   HAY A+  +++F  +S P YG  S + +D+ + G RV    
Sbjct: 114 ATQHMPEIIEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 NKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  +L  HYR  ++++   L +A+  L +         +   A            A
Sbjct: 286 ASTVRYFLLSGHYRSQLNYSEDNLKQAKAALERLYTALKGLDLSVEAAPASEYVAKFKEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE    K  DL               +LGI         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKVDDLAAASALGVSMKQLGDVLGILEQDVDGFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K +++AD  R  L + G ILED      G   T W++K
Sbjct: 406 GSDDEVAQIEALIAERNRARTEKDWAAADVARDGLNALGVILED------GPEGTTWRKK 459


>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 473

 Score =  601 bits (1549), Expect = e-170,   Method: Composition-based stats.
 Identities = 187/484 (38%), Positives = 259/484 (53%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY   
Sbjct: 12  PMLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +
Sbjct: 72  --SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLE 123

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+HIP++I L + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV  
Sbjct: 124 PRATHHIPEIIELTERLIAREHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEI 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+
Sbjct: 184 ADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLM 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        
Sbjct: 244 FPHHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLE-------Y 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVL 352
           + A  +R  ++  HYR  ++++ + L +A   L +                    +    
Sbjct: 296 YDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVHAAPAGGAEFEARFR 355

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
           +A+ +D NT  A   L  LARE  +         + L       AH+LG+      L   
Sbjct: 356 AAMDDDFNTPEAYSVLFDLAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQ 415

Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                + +    IE L+++R      K ++ AD  R QL   G +LED      G + T 
Sbjct: 416 SGAQSDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTT 469

Query: 457 WKQK 460
           W++K
Sbjct: 470 WRRK 473


>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 459

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 182/480 (37%), Positives = 262/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSL--DY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 60  DLTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +             A            A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVATFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +S+AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMGIVLED------GANGTTWRKQ 459


>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|229558789|sp|B1KLU0|SYC_SHEWM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 459

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RNITD+DDKII+RA +        ++   +T +   +  KD   L    P  +PR
Sbjct: 61  -VNFLRNITDVDDKIIKRAAENK------ESCDSLTERLIGEMHKDFDSLNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ ++I +++ +I   HAY + N +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATLHMAEIIEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 SKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHNT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-IDPA--------VLSA 354
           A  IR  +L  HYR  ++++   L +A+  L++         + ++PA           A
Sbjct: 286 AATIRYFLLSGHYRSQLNYSEDNLKQAKSALARLYTALKDLDLTVEPAAAENFVSKFKQA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE  +           L       A +LGI         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREVNRLKVTDLAQASALAVRLKELAGVLGILEQDVDSFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N      +E L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 SNDAEVAEVEALIAERNRARAEKDWPAADIARDGLNALGVILED------GPEGTTWRKK 459


>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 461

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LNFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I +++ L++ +I  G AY A N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIVELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHGT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFSTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L ++ARE          K   L  +    A I+GI            
Sbjct: 346 MNDDFNTPEAYSVLFEMAREINRIKTESVEKASALGALMRELADIIGILHQDPEAFLQGD 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 406 AAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 459

 Score =  601 bits (1549), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRAAKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 459

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 463

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/485 (36%), Positives = 254/485 (52%), Gaps = 47/485 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY 
Sbjct: 1   IEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  +T+VRNITDIDDKII+RA +        ++   +T +       D   L    P 
Sbjct: 61  GYD--LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGDMHADFDALNMKRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +PRAT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV
Sbjct: 113 VEPRATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             +  K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG D
Sbjct: 173 DIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L       
Sbjct: 233 LQFPHHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG------ 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPA 350
             + A  +R  ++  HYR  ++++   L +A   L +                       
Sbjct: 286 -HYDAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSR 344

Query: 351 VLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL- 401
             +A+ +D NT  A   L  +ARE          K  +L  +    A ++GI        
Sbjct: 345 FTAAMNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAF 404

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 N +    IE L++ R      K +++AD  R +L   G +LED      G   T
Sbjct: 405 LKGNAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGT 458

Query: 456 RWKQK 460
            W++K
Sbjct: 459 TWRRK 463


>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|21264007|sp|Q8ZCC0|SYC_YERPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123073499|sp|Q1CKY1|SYC_YERPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123372235|sp|Q1C4U1|SYC_YERPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187470969|sp|A7FL46|SYC_YERP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187470970|sp|A4TP63|SYC_YERPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558804|sp|A9R253|SYC_YERPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
          Length = 461

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +  +        L       A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|30316151|sp|Q8D8R1|SYC_VIBVU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 460

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/481 (37%), Positives = 256/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ +    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAPAGGEEYVSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLL------PIFNASAHILGIE-------VCKE 399
           + +D NT  A   L  +ARE    K  DL        +    A ++GI        +  +
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPDAFLKGD 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 473

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 187/484 (38%), Positives = 259/484 (53%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY   
Sbjct: 12  PMLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              +TYVRN+TD+DDKII+RA      I  N+    +TS+   +  KD   L    P  +
Sbjct: 72  --SLTYVRNVTDVDDKIIKRA------IENNETCEQLTSRMLAEMHKDFDALNLERPDLE 123

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+HIP++I L + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV  
Sbjct: 124 PRATHHIPEIIELTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+
Sbjct: 184 ADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLM 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         
Sbjct: 244 FPHHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------Y 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVL 352
           + A  +R  ++  HYR  ++++ + L +A   L +            T       +    
Sbjct: 296 YDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFR 355

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
           +A+ +D NT  A   L  +ARE  +         + L       AH+LG+      L   
Sbjct: 356 AAMDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQ 415

Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                + +    IE L+++R      K ++ AD  R QL   G +LED      G + T 
Sbjct: 416 SGAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTT 469

Query: 457 WKQK 460
           W++K
Sbjct: 470 WRRK 473


>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|56749448|sp|Q7MLR5|SYC_VIBVY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 460

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/481 (37%), Positives = 254/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ +    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAPAGGEEYVSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLL------PIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    K  DL        +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPDGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|229558612|sp|B3GXR0|SYC_ACTP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 459

 Score =  600 bits (1548), Expect = e-169,   Method: Composition-based stats.
 Identities = 183/479 (38%), Positives = 264/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+ + + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNEMCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAARLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458


>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|123030490|sp|Q0HTK4|SYC_SHESR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 461

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 253/482 (52%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYN++ R+  EF+ I P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   
Sbjct: 2   PMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V + RNITDIDDKII+RA +        +  + +T +   +  KD   L  + P  +
Sbjct: 62  E--VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDFE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I +++ ++  GHAY A + +++F  +S P YG  S + +++ + G RV  
Sbjct: 114 PRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL 
Sbjct: 174 DDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
           +    +R  +L  HYR  I+++ + L +A   L +                         
Sbjct: 286 YDPETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAPAPAEEFVAKFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A   L  + RE  +           +       A +LG+         K
Sbjct: 346 AAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFK 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W+
Sbjct: 406 GEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED------GPSGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 KK 461


>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
 gi|304409708|ref|ZP_07391328.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307304064|ref|ZP_07583817.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
 gi|187631634|sp|A6WLP8|SYC_SHEB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
 gi|304352226|gb|EFM16624.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912962|gb|EFN43385.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 459

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 255/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A + +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A   L +             +           +A
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE  +           L       A +LG+         +  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K +++AD  R +L   G  LED      G   T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED------GPSGTTWRKK 459


>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 460

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/481 (37%), Positives = 252/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +       D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGDMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K  +L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKGN 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 459

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 256/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|91226019|ref|ZP_01260946.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269968727|ref|ZP_06182720.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|91189460|gb|EAS75737.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|269826654|gb|EEZ80995.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 460

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/481 (37%), Positives = 253/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K  +L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
 gi|187631635|sp|A9KWH4|SYC_SHEB9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 459

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 255/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A + +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A   L +             +           +A
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIAKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE  +           L       A +LG+         +  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K +++AD  R +L   G  LED      G   T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED------GPSGTTWRKK 459


>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 459

 Score =  600 bits (1547), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 459

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +        ++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRAAENK------ESCESLTERLIGEMHRDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   HAY + N +++F  SS P YG  S + I++ + G RV  + 
Sbjct: 114 ATLHMPEIIDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTS-YVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  IR  +L  HYR  ++++   L +A+  L +   +         S           +A
Sbjct: 286 AGTIRYFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVESADASEFVAKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIE------VCKEH 400
           + +D NT  A   L ++ RE    K  D+             A +LG+         K  
Sbjct: 346 MDDDFNTPEAYSVLFEMVREINRVKGSDIAAASALGVKLKELAEVLGLLEQDVDTFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 GSDDEVAQIEALIVERNRARAEKDWPAADIARDGLNALGVILED------GPSGTTWRKK 459


>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166225307|sp|A1RL92|SYC_SHESW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 461

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 258/482 (53%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYN++ R+  EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   
Sbjct: 2   PMLKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +
Sbjct: 62  E--VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDFE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I +++ ++  GHAY A + +++F  +S P+YG  S + +D+ + G RV  
Sbjct: 114 PRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL 
Sbjct: 174 DENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VL 352
           + A  +R  +L  HYR  ++++   L +A   L +         +   A           
Sbjct: 286 YDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIVKFK 345

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A   L  + R+          K   L       A +LG+         K
Sbjct: 346 AAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFFK 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W+
Sbjct: 406 GEGSDDEVAEIEALIVERNRARSEKDWPAADVARNRLNELGVVLED------GPSGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 KK 461


>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|31076996|sp|Q87QJ9|SYC_VIBPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 460

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/481 (37%), Positives = 252/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +       D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGDMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K  +L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKGN 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082075|sp|B0TLV2|SYC_SHEHH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 459

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 255/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  +F  + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  KD   L    P ++PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCDSLTERLIAEMHKDFDSLNMARPDNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I   HAY A+  +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATQHIPEIIDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  +L  HYR  ++++   L +A+  L +         +   A           +A
Sbjct: 286 AATVRYFLLSGHYRSQLNYSEDNLKQAKAALERIYTALKDLDLSVEAAPAQEFVAKFKTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE          K   L       A +LGI         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKATDMAKASALGVALKELADVLGILGQDVDTFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTWRKK 459


>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 461

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  ++    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENSETCEQLTTRMLAEMHKDFDALNLQRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I + + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIEMTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPKGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDNDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|187629806|sp|A3DH43|SYC_CLOTH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 468

 Score =  599 bits (1546), Expect = e-169,   Method: Composition-based stats.
 Identities = 176/483 (36%), Positives = 255/483 (52%), Gaps = 53/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF  ID   ++MY CGPTVY++ HIGNARP I+FD L R L Y     
Sbjct: 1   MRLYNTLTRKKEEFHPIDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTLRRYLEYKGYN- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA +E         +  +  K   ++  D   L     T  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKRANEE------GITVKELADKFINEYFVDAKGLGIKEATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I +I+ +   G AY  + ++ F       YG  S + +++ ++G R+     
Sbjct: 113 ATENIDAIIEMIKKLEEKGFAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARIDVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK   P EP W+SPWG+GRPGWHIECSAM++ YLG+  DIH GG DL+FPH
Sbjct: 173 KKDPMDFALWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  W+HNGF+N++G KM+KS GNF T+ ++        +++  
Sbjct: 233 HENEIAQSEAANG-KPFARFWLHNGFINVDGEKMAKSKGNFFTVRDI-------AKTFDY 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
            VIR  ML  HYR PI+F+ + L +A+  L +      +                     
Sbjct: 285 EVIRFFMLSAHYRSPINFSAELLEQAKNGLERIYNCLDNLEYLKEHAQAEKITDSERELQ 344

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNASA 389
                I    + A+ +D+NT  AI A+  + +E   N +             L +     
Sbjct: 345 NRLLGIKAKFIEAMDDDINTADAIAAIFDIVKEVNTNINATSNSSKEIIDFSLSLIKELG 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LGI   ++   K +   IE+L++ R    K K + +AD IR +L+  G ILED     
Sbjct: 405 GVLGI--AQKSRQKVLDKEIEELIERRQKARKEKDWKTADEIRDKLKEMGIILEDTPQGV 462

Query: 450 NGQ 452
              
Sbjct: 463 KWT 465


>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 461

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 256/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESIETLTNRMIGEMHKDFAALGILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+  +I  GHAY A+  +++FD  S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATRHIDEIIELVGRLIERGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA       N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEVAQSTCAHDG-PYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  +++    L +A   L +             +      +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDVSAVAAGGEEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +           L       A +LGI            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDKTAADALAAKLRQLAEVLGILQQDPEQFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L++ R    + K ++ AD  R +L + G +LED      G + T W+
Sbjct: 406 AQANDDEVAEIEALIKMRNDARQAKDWAQADVARDKLNALGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|187631637|sp|A8H617|SYC_SHEPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 459

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 254/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+  +F  + P  + MYVCG T+YD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +        ++   +T +   +  +D   L    P ++PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANENK------ESCDSLTERLIAEMHRDFDALNMARPDNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   HAY A N +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATLHMPEIIEMVEKLIEREHAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  +L  HYR  ++++   L +A+  L +         +   A           SA
Sbjct: 286 ATTVRYFLLSGHYRSQLNYSEDNLKQAKSGLERIYTALKDLDLTVEAAPAEEFVAKFKSA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE          K   L       A +LGI         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKATDMAKASALGVALKQLADVLGILGQDVDTFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N +    IE L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 GNDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTWRKK 459


>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166225306|sp|A0KYM2|SYC_SHESA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 461

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 256/482 (53%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYN++ R+  EF+ I P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   
Sbjct: 2   PMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V + RNITDIDDKII+RA +        +  + +T +   +  KD   L  + P  +
Sbjct: 62  E--VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDFE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I +++ ++  GHAY A + +++F  +S P YG  S + +++ + G RV  
Sbjct: 114 PRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL 
Sbjct: 174 DDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
           + A  +R  +L  HYR  I+++ + L +A   L +            T+           
Sbjct: 286 YDAETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVTAAPAEEFVAKFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A   L  + RE  +           +       A +LG+         K
Sbjct: 346 AAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFK 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W+
Sbjct: 406 GEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED------GPSGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 KK 461


>gi|54294205|ref|YP_126620.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
 gi|61216142|sp|Q5WX29|SYC_LEGPL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
 gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
          Length = 456

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 192/474 (40%), Positives = 260/474 (54%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L RK   F ++ P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +         +I  +T++       DT  L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIARASERDV------SIDELTAQYIDAMNNDTHALNILPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ ++  G+AY + N ++ ++  + P YG  S + I+    G+RV    
Sbjct: 114 ATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L + G KM+KS GNF TI ++L       +   
Sbjct: 234 HHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEHH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAVLS 353
             VIR  +L +HYR P++++ + L  A+  L +  Q                        
Sbjct: 286 PEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFNQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------VCKEHLNKNI 405
           A+ +D NT  A+  L +LA E  K++   L       A ILG          +  L +  
Sbjct: 346 AMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEEE 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + IE+L+ ERL     + ++ AD IR  L SKG  LED      G   T W++
Sbjct: 406 KLVIEQLIAERLKARAERNWTKADQIRADLLSKGIELED------GATGTTWRR 453


>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|30316159|sp|Q8EG22|SYC_SHEON RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24347617|gb|AAN54844.1|AE015623_6 cysteinyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 459

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 255/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I+P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITDIDDKII+RA +        +  + +T +   +  KD   L    P  +PR
Sbjct: 61  -VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A + +++F  +S P YG  S + +++ + G RV    
Sbjct: 114 ATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLS-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  I+++ + L +A   L +             +           +A
Sbjct: 286 AETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAAAPAEEFVAKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE  +           L       A +LG+         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKLTDMAEASALAVSMKQLADVLGLLHQSPDAFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWPAADVARNRLNELGVVLED------GPSGTTWRKK 459


>gi|254496542|ref|ZP_05109412.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354241|gb|EET12906.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 455

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 183/473 (38%), Positives = 260/473 (54%), Gaps = 40/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R    F +I+P  I MYVCG TVYD  H+G+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRTKEPFVSINPGKIGMYVCGITVYDHCHLGHARSMVCFDVIVRYLRSQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII RA +          I  +T+       +D   L  L P ++PR
Sbjct: 61  -VTFVRNITDIDDKIIARANER------GIPIDELTAHYIDAMHEDMRALNILPPNYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LI+ ++  G+AY ++  ++ +   S   YG  S + ++    G RV    
Sbjct: 114 ATEHIATIIRLIERLLARGNAYVSDNGDVCYQVDSFAEYGKLSHKDLEGLMSGARVEVVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKPGEPYWASPWGNGRPGWHIECSAMAIEELGEHFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L +   KMSKS GNF TI ++L           
Sbjct: 234 HHENEIAQSEAATH-KPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKH-------H 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIID----PAVLSA 354
             V+R  +L +HYR  ++++ + L  A+  L++  QT      T  G +D         A
Sbjct: 286 PEVVRYFLLSSHYRSSLNYSEENLFNAKKALTRLYQTMKDSPVTVNGELDNHWINEFNKA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEHLNKNIS 406
           + +D N+  A+  L +L+ E  KN    L       A ++G+      E  +   +++  
Sbjct: 346 MNDDFNSPVALSVLFQLSHEVNKNGTPVLATTLKHLAGLMGLLQSDSAEFLQAGFDEDDK 405

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            AIE+L+ ERL     + +  AD IR +L ++G  LED      G + T W++
Sbjct: 406 AAIEQLIAERLQARADRNWERADQIRAELLNQGIELED------GAKGTTWRK 452


>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 460

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/481 (37%), Positives = 258/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I+   + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATEFIAEIIELVEKLIERGFAYVADNGDVMFEVGQFDEYGKLSKQDLDQLQAGARVDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +   +     +  PA            A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLTVPAAGGEEYVKRFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           +  +    A ++GI   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRIKNDNLEQASAMGSLMRELADVIGILHQEPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEGLIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254781698|sp|B7VGZ1|SYC_VIBSL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 461

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LNFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDIDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHGT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFSTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L ++ARE          K   L  +    A I+GI            
Sbjct: 346 MNDDFNTPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQGD 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 406 AAGNDDEVAEIEGLIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|51595384|ref|YP_069575.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186894407|ref|YP_001871519.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|61216168|sp|Q66DK9|SYC_YERPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558803|sp|B2K7N2|SYC_YERPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51588666|emb|CAH20275.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|186697433|gb|ACC88062.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
          Length = 461

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +  +        L       A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNDLGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254781693|sp|B8E5F2|SYC_SHEB2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 459

 Score =  599 bits (1545), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 254/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A + +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A   L +             +           +A
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE  +           L       A +LG+         +  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K +++AD  R +L   G  LED          T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELEDS------PSGTTWRKK 459


>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|187631632|sp|A1S4X2|SYC_SHEAM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 459

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 182/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKII+RA +        ++   +T +   +   D   L  + P+ +PR
Sbjct: 61  -VNYQRNITDVDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMVRPSFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I ++  ++  GHAY A + +++FD SS   YG  S + +++ + G RV    
Sbjct: 114 ATLHIDEIIDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 NKRNPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  +L  HYR  ++++   L +A   L +         +   A          ++A
Sbjct: 286 AQTVRYFLLSGHYRSQLNYSEDNLKQARASLERMYTALKGLDLTVEAAGADEFVSRFMAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLP------IFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE    K  D+             A +LGI         +  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKTSDMAAASQLGVALKELAEVLGILSSTPEAFLQGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N +    IE L+ ER      K + +AD  R +L + G +LED      G   T W++K
Sbjct: 406 GNADEVAEIEALIVERNRARAEKDWPAADVARDRLNALGVVLED------GPEGTTWRKK 459


>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 459

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 185/479 (38%), Positives = 266/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVDRMIAEMHKDFDDLNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A +++++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSCCAHSGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           +  +R   L  HYR  +++++  L  A   L +   +                  A  +A
Sbjct: 286 SETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVQVAGSEQYVEAFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N +    IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 ANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTMWRK 458


>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|123029526|sp|Q0HH98|SYC_SHESM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 461

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 253/482 (52%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYN++ R+  EF+ I P  + MYVCG TVYD  HIG+ R  + FD++ R LRY   
Sbjct: 2   PMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V + RNITDIDDKII+RA +        +  + +T +   +  KD   L  + P  +
Sbjct: 62  E--VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDFE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I +++ ++  GHAY A + +++F  +S P YG  S + +++ + G RV  
Sbjct: 114 PRATLHITEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL 
Sbjct: 174 DDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
           +    +R  +L  HYR  I+++ + L +A   L +                         
Sbjct: 286 YDPETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAPAPAEEFVAKFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A   L  + RE  +           +       A +LG+         K
Sbjct: 346 AAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFFK 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+ ER      K + +AD  R +L   G +LED      G   T W+
Sbjct: 406 GEGSDDEVAEIEALIVERNRARVEKDWPAADVARNRLNELGVVLED------GPSGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 KK 461


>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 461

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LNFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A N +++F+      YG  S++ +++ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDIDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHGT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFSTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L ++ARE          K   L  +    A I+GI            
Sbjct: 346 MNDDFNTPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQGD 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 406 AAGNDDEVAEIEGLIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|22257048|sp|Q8R7T3|SYC_THETN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 467

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 188/488 (38%), Positives = 253/488 (51%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ R   EF+ +    + MYVCGPTVY++ HIGNAR  IVFD + R L Y     
Sbjct: 1   MRLYNTMTRTKEEFKPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII RA++E      N     I  +  +++ KD   L     T  PR
Sbjct: 59  TVNYVQNFTDIDDKIINRAKEE------NTTEKEIAERFIEEYFKDADALGIKRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  +  + F+T+   +YG  S + IDE   G RV     
Sbjct: 113 ATEHIDDIIEFIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARVEIDEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPLDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ EL E        +  
Sbjct: 233 HENEIAQSEAAY-DQPFSKYWMHIGYLNVNNEKMSKSKGNFFTVRELTE-------KYDP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
            V+RL MLM HYR PI+F++  L +A+    +      +                     
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLLDQAKSAYERLSNAVVNLKHLANITKDRELSDEEKDLI 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ +  N            +L +F   + +
Sbjct: 345 VKFDEYKKQFEEAMDDDFNTADAISVLFEMAKTANANLSGNSSKKLVEYILEMFLKLSDV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+        +     I +L++ER    K K +  AD IR +L+ +G ILED       
Sbjct: 405 LGLSYKNAET-EIEDEEILRLIEERQKARKEKNWKLADEIRDKLKERGIILEDT------ 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 PEGVRWKR 465


>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511839|sp|C6DAX2|SYC_PECCP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 461

 Score =  599 bits (1544), Expect = e-169,   Method: Composition-based stats.
 Identities = 174/482 (36%), Positives = 251/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA +        +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRAAEN------GETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A N +++F   + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHITDIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSSCAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +             +      +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYTALRGTDPDAAAQGGDEFEGRFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAQAANQLASALRKLSGVLGLLEQDPEQFLQNG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             ++ +    IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDNDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 461

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 185/482 (38%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLV-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTVWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|269960838|ref|ZP_06175209.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269834502|gb|EEZ88590.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 460

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K  +L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGDDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 459

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 188/479 (39%), Positives = 266/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ I MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -VRYVRNITDVDDKIIKRALENK------ETCDQLVDRMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R   L  HYR  +D++V+ L  A   L +   +         +        A  +A
Sbjct: 286 AESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTSLRGCDVSGVAEGGEHYVEAFKTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIARELNKLKIEDMAKANGLAVRLKELAGVLGLLEQEPESFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N + +  IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 TNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPN------GTIWRK 458


>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
 gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
 gi|11387140|sp|Q9KQZ9|SYC_VIBCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631647|sp|A5F763|SYC_VIBC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781697|sp|C3LNF1|SYC_VIBCM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
 gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
 gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
          Length = 459

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 459

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYIADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDIAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 406 AEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 459


>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|61216155|sp|Q60BG8|SYC_METCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 465

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 186/486 (38%), Positives = 264/486 (54%), Gaps = 52/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ ++P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR+   + 
Sbjct: 2   LKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRHLGLK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKII RA      +   + I  +T++  +   +D   L  L P H+PR
Sbjct: 61  -VTYVRNVTDIDDKIIRRA------VENGETIGALTARFIEAMHEDERALGVLPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  ++ +I  +I  GHAY  +N ++ +  +S PNYG  S + +DE + G R+    
Sbjct: 114 ATESIDDILAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSGKNLDELRAGERIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG+DL FP
Sbjct: 174 AKRDPLDFVLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ +   KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSEGATGEH-FVNYWMHNGFVRINEEKMSKSLGNFFTVREILAR-------YR 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDPA 350
             V+R  +L +HYR P++++ + L EA   LS+                           
Sbjct: 286 PEVVRFFILNSHYRSPLNYSDENLDEAAAALSRLYTALRGLAPDLPLPLGEDRDEGFSSR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL- 401
              A+ +D NT  AI  L  LARE  +           L     +  ++LG+        
Sbjct: 346 FADAMQDDFNTPEAIAVLFDLAREINRHKAAEPAKAAALGATLKSLGNVLGLLQTDPEAY 405

Query: 402 -------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                  +      IE  ++ RL   K K ++ +D IR +L+++G ILED          
Sbjct: 406 FKSDAGGSGLSDADIETRIRARLEARKAKNWAESDRIRDELKAQGIILEDSAA------G 459

Query: 455 TRWKQK 460
           T W+++
Sbjct: 460 TTWRRE 465


>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 459

 Score =  598 bits (1543), Expect = e-169,   Method: Composition-based stats.
 Identities = 184/480 (38%), Positives = 262/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCEQLVDRMVVEMYKDFDALNILRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHG-NQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +             A            A
Sbjct: 286 AESVRYFLLSAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDTFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L       A ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMARELNKLKTEDMDKANGLAARLRELAGILGLLQLDPEQFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K + +AD  R  L   G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTQMGIVLED------GLNGTTWRKQ 459


>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 461

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 187/482 (38%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLKRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIAREHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDMTAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 461

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 185/482 (38%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADGDEVAKIEALIKQRNDARTSKDWALADSARDQLNELGIVLED------GPQGTVWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|229558805|sp|B1JHJ1|SYC_YERPY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
          Length = 461

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 257/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGVEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +  +        L       A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKDWALADAARDQLNDLGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 459

 Score =  598 bits (1542), Expect = e-169,   Method: Composition-based stats.
 Identities = 178/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L+Q +I  G AY A+  +++F+      YG  S++ +++ + G RV  + 
Sbjct: 114 ATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            PA           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRRVPAAGGEEYLSRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  +ARE  +           L  +    A ++GI         +  
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                +  IE L++ R     +K +++AD  R +L   G +LED  N       T W++K
Sbjct: 406 AEDEEAEQIEALIKLRNDSRAVKDWANADMARDKLNEMGIVLEDCPN------GTTWRRK 459


>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 461

 Score =  597 bits (1541), Expect = e-169,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A N +++F+      YG  S++ +D+ + G RV    
Sbjct: 114 ATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF++WK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVVWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI +LL         + 
Sbjct: 234 HHENEIAQSCCAHGTD-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDLLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLTAAPAGGEEYVTRFSTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L ++ARE          K   L  +    A I+GI            
Sbjct: 346 MNDDFNTPEAYSVLFEMAREINRIKTESIEKASGLGALMRELADIIGILHQDPEAFLQGD 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L++ R      K +++AD  R +L   G +LED      G   T W+
Sbjct: 406 AAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|187470968|sp|A1JNP9|SYC_YERE8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 461

 Score =  597 bits (1541), Expect = e-169,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      +  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------LENNETCEQLTTRMLVEMHKDFDALNLKRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       A++LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDITAANALAAELRKLAYVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDDDEVAKIEVLIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|61216136|sp|Q5QYP3|SYC_IDILO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 459

 Score =  597 bits (1541), Expect = e-169,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 268/478 (56%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL RK   F+ I P ++ +YVCG T YD+ HIG+AR  + FD++ R LR      
Sbjct: 3   LTVFNTLTRKKQLFEPIQPGHVGIYVCGVTTYDYCHIGHARTYVAFDIVVRYLRKLGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA +        +    +T +  ++  KD   L  + P  +PR
Sbjct: 61  SVKYVRNITDLDDKIIKRAAEN------GEDFHQVTERFIREMHKDFDALNLVRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+H+ ++I +I+ +I +G+AYEA N +++FD S+  +YG  SR+ +++ + G+RV    
Sbjct: 115 VTSHMDEIILMIERLIENGNAYEAGNGDVLFDVSTFNDYGKLSRQDLEQLQAGSRVDVDA 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 175 AKQDPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLSFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA++ E     W+H+G + ++  KMSKS GNF TI  +LE        + 
Sbjct: 235 HHENEIAQSCCANQSE-YVKYWMHSGMVQVDNEKMSKSLGNFFTIRSVLE-------QYD 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAVLS 353
           A  +R  +L +HYR  +++T + L +A   L +                 +     +   
Sbjct: 287 AETVRYFLLSSHYRSQLNYTQENLDQAHSALERLYTALRDITPQTASEELRSKYWQSFQQ 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
           A+ +DLN   A+  L ++ARE  +N +        L  +    A ++G+           
Sbjct: 347 AMDDDLNAPEAMSVLFEIAREINRNRESAPDTAAQLAHVLLELAEVMGLLQQSPEEFLQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + +    IE L+ +R    + K +++AD  R +L + G +LED      G   TRW++
Sbjct: 407 DDDDVAKIEALIAKRNQAREDKDWAAADEARDELTNMGIVLED------GAEGTRWRR 458


>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 461

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 184/482 (38%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +P 
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLQRPDLEPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A+  +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELTERLIARNHAYVADNGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDMTAANALAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 467

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 264/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F+ I  + + MYVCG TVYD  H+G+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA      +   ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRA------LKNRESCDQLVDRMVAEMYKDFDMLNVLRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY + N +++F+  S   YG  SR+ +++ + G RV   +
Sbjct: 114 ATHHIAEIITLVEKLIQRGHAYVSSNGDVMFNVESFKEYGKLSRQNLEQLQAGARVEIVH 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKPEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF T+ ++L         + 
Sbjct: 234 HHENEIAQSCCAHG-NQYVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLNI-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR P++++ + L  A   L +                      A   A
Sbjct: 286 AESVRYFLLNAHYRSPLNYSEENLNLAHTALERLYTALRGTDKSAIACGGENYINAFKEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L       A ILG+      E  +  
Sbjct: 346 MNDDFNTPNAVSVLFEIAREVNKLKNEDMEKANSLAARLRELADILGLLYQDPEEFLQSG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           L+      IE L+++R      K +++AD  R+QL     +LED      G   T W++
Sbjct: 406 LDDEEVKLIESLIKQRNEARAAKDWATADAAREQLSKMKVVLED------GANGTTWRK 458


>gi|330963331|gb|EGH63591.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 460

 Score =  597 bits (1540), Expect = e-168,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++  ++T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDVLTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIEKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          DPA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAADPAGGEAFVERFTAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166225305|sp|A4Y5H9|SYC_SHEPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 461

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYN++ R+  EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   
Sbjct: 2   PMLKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +
Sbjct: 62  E--VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDFE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I +++ ++  GHAY A + +++F  +S P+YG  S + +D+ + G RV  
Sbjct: 114 PRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL 
Sbjct: 174 DENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQ 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VL 352
           + A  +R  +L  HYR  ++++   L +A   L +         +   A           
Sbjct: 286 YDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIVKFK 345

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A   L  + R+          K   L       A +LG+         K
Sbjct: 346 AAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFFK 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+ ER      K +++AD  R +L+  G +LED      G   T W+
Sbjct: 406 GEGSDDEVAEIEALIVERNRARSEKDWAAADVARNRLDILGVVLED------GPSGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 KK 461


>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
 gi|187631633|sp|A3D302|SYC_SHEB5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 459

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 254/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A + +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 TKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A   L +             +           +A
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE  +           L       A +LG+         +  
Sbjct: 346 MDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K +++AD  R  L   G  LED      G   T W++K
Sbjct: 406 GSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELED------GPSGTTWRKK 459


>gi|330503048|ref|YP_004379917.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328917334|gb|AEB58165.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 461

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 190/478 (39%), Positives = 263/478 (55%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ ++ +++RMYVCG TVYDF HIG+AR M+ FDV+ R LR    + 
Sbjct: 3   LSIYNTLSKVKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        +    +  +      +D  RL  L P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIKRANEN------GEPFEALVERMIAAMHEDEARLNVLRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M  +IQ +I  G AY   N ++ +  +    YG  SRRKIDE K+G R+    
Sbjct: 115 ATGHIAGMHQMIQTLIDKGFAYAPGNGDVYYRVTKFETYGKLSRRKIDELKIGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG+GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 175 IKEDPLDFVLWKAAKPGEPSWESPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 235 HHENEIAQSEAATG-KQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++           PA          SA+
Sbjct: 287 PEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAGGEAFVERFGSAM 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-------EH 400
            +D N+  A   L ++ RE  +  +        L       A +LG+   +         
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRESDLQAAAGLAAQLKQLASVLGVLQLEPDAFLQAGA 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+  RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 407 AGKVDAAEVEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 458


>gi|320016265|gb|ADV99836.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 461

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 257/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P E  WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGESRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +  +        L       A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|156974130|ref|YP_001445037.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156525724|gb|ABU70810.1| hypothetical protein VIBHAR_01842 [Vibrio harveyi ATCC BAA-1116]
          Length = 460

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +++ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRYTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K  +L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|330878748|gb|EGH12897.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 460

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++         ++PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAVEPAGGEAFVERFTAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETGVTAAAGLAARLKQLACVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 461

 Score =  597 bits (1539), Expect = e-168,   Method: Composition-based stats.
 Identities = 185/482 (38%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  ++    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENSETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L++ +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIELVERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANAAPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|212636030|ref|YP_002312555.1| cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|226735064|sp|B8CRG0|SYC_SHEPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
          Length = 459

 Score =  596 bits (1538), Expect = e-168,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F  I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCDSLTERLIGEMHRDFDSLNMARPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I +++ +I   HAY A N +++F  SS P YG  S + +++ + G RV  + 
Sbjct: 114 ATLHMPEIIEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVED 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDTK-YVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAVLS----A 354
           A  +R  +L  HYR  ++++ + L +A+  L +                  A ++    A
Sbjct: 286 AATVRYFLLSGHYRSQLNYSEENLKQAKSGLERIYTALKDLDLTVDAAPAEAFIAQFKRA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L ++ RE  +           L       A +LGI         K  
Sbjct: 346 MDDDFNTPEAYSVLFEMVREINRLKLTDMQQASALGVALKQLADVLGILGQDVDTFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R  L + G ILED      G   T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWPAADVARDGLNALGVILED------GPEGTTWRKK 459


>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 459

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 187/479 (39%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ I MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -VRYVRNITDVDDKIIKRALENK------ETCDQLVDRMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIVAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W+SPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R   L  HYR  +D++V+ L  A   L +             +        A  +A
Sbjct: 286 AESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTALRGCDVSGAAEGGEHYVEAFKTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPESFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N + +  IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 TNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPN------GTIWRK 458


>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 459

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 182/480 (37%), Positives = 262/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVVEMYKDFDALNILRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++  +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHG-NQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +                      A   A
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDAFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L       A ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEIARELNKLKTQDMAKANGLAARLRELAAILGLLQLDPEQFLQAS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +++    IE L+++R      K + +AD  R  L   G +LED      G   T W+++
Sbjct: 406 SDEDEVAKIEALIKQRNEARVAKDWPAADAARNALTQMGIVLED------GPNGTTWRKQ 459


>gi|330810612|ref|YP_004355074.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327378720|gb|AEA70070.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 460

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 177/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDI+DKII RAR+        +    +T +  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIEDKIINRAREN------GEPYDALTERMIKAMHEDEARLNILKPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M+ +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++         +  A            +
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVPAAGGEAFVARFTEVM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLTARANKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|157369409|ref|YP_001477398.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|187631631|sp|A8GAY0|SYC_SERP5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157321173|gb|ABV40270.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 461

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII RA          ++   +T++   +   D   L    P  +PR
Sbjct: 60  SLNYVRNVTDVDDKIIRRA------TENGESCDQLTTRMLAEMHADFDSLLIERPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +++ + Q +I  GHAY A N +++F   S P YG  SR+ +D+ + G RV    
Sbjct: 114 ATQHIAEIVEITQRLIDRGHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCAHDG-PYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLG-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                  + +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDVNAQPAGGEVFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A  AL  LARE  +         + L       A +LG+   +  L     
Sbjct: 346 MDDDFNTPEAYSALFDLAREVNRLKAEDLTAANGLAAELRKLAKVLGLLQQEPELFLQGG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    K K ++ AD  R +L     +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIKQRNDARKAKDWALADAARDRLNEMNIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 460

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 180/481 (37%), Positives = 257/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRANEN------GESCDSLTERLIGEMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ +   +YG  SR+ +D+ + G RV  + 
Sbjct: 114 ATEYIKEIIELVETLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLDQLQAGARVEIES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSSLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGTD-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++   L +A   L +   +     I  PA            A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDISVPAAGGEDYVKRFTDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKTEDVMAASALGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N +    IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GSEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|61216271|sp|Q7N0S5|SYC_PHOLL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
           [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 461

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 184/482 (38%), Positives = 256/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHPGKVGMYVCGITIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA +        ++   +T +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRAAENS------ESCDDLTGRMLAEMYKDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L +++I  GHAY A+  +++F   S  +YG  SR+ + + + G RV    
Sbjct: 114 ATRHIQEIIALTESLIKRGHAYVADNGDVMFSVESDQDYGLLSRQDLSQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T   L +A   L ++                 I +   + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEDNLKQARTALERFYTALRGTDASVPPAGGEIFEARFIDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH------ 400
           + +D NT  A   L  + RE  +         + L       A ILG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMVREINRLKSEDMDAANGLAAELRKLAGILGLLQQQPEQFLHRG 405

Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    K K +  AD  R QL   G  LED      G + T W+
Sbjct: 406 IQADDEEIAKIEALIKQRNDARKNKDWPLADSARNQLNEMGIELED------GPQGTSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|307822084|ref|ZP_07652316.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736650|gb|EFO07495.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 492

 Score =  596 bits (1537), Expect = e-168,   Method: Composition-based stats.
 Identities = 187/482 (38%), Positives = 267/482 (55%), Gaps = 47/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   FQ      + MYVCG TVYD+ HIG+AR M+VFD + R  R+   E 
Sbjct: 32  LKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHQGYE- 90

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA      I   +    +T +      +D   LA L P  +PR
Sbjct: 91  -LTYVRNITDIDDKIIQRA------IENGEDYGKLTERFIDAMHEDERALAVLPPDLEPR 143

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  +I +I+ ++    AY  +N ++ +  +   +YG  S + +D+ + G RV    
Sbjct: 144 ATQSIADIISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSGKNLDDLQAGERVDVDL 203

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG+DL FP
Sbjct: 204 AKRNPMDFVLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQFP 263

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   EK  N+W+HNGF+ ++  KMSKS GNF T+ E+L         + 
Sbjct: 264 HHENEIAQSEGATG-EKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVLN-------QYK 315

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPA----VLSA 354
             +IR  +L +HYR P++++ ++L +A+  L++         +T++  I+ A       A
Sbjct: 316 PEIIRFFILSSHYRSPLNYSDEQLNDAKAALTRLYTALRGVETTAEAAIEEAYKTRFEQA 375

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L  LAR+  K  +        L       + +LGI         K  
Sbjct: 376 MDDDFNTPVALAVLFDLARDLNKAKELDQQKACALAATLKYLSGLLGILQDDPDAFLKGS 435

Query: 401 LNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  +     +E+ +Q RL   K K ++ AD IR  L+ +G ILED  +       T W+
Sbjct: 436 GDAAVLGEETVEQQIQARLDAKKAKDWALADKIRNDLKEQGVILEDSPDGT-----TSWR 490

Query: 459 QK 460
           ++
Sbjct: 491 RE 492


>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 461

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 175/482 (36%), Positives = 249/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA      I   +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A N +++F   + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSSCAHDGS-YVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +                    +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALDRLYTALRGTDASVAAHGGDEFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             ++ +    IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|190891109|ref|YP_001977651.1| cysteinyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|229558782|sp|B3PUS4|SYC_RHIE6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|190696388|gb|ACE90473.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 463

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 266/459 (57%), Positives = 344/459 (74%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++K+YNTL R+ + F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 4   TPELKLYNTLTREKSVFAPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           GE  VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P  
Sbjct: 64  GESHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNV 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G RV  
Sbjct: 124 EPRATDNIEEMIEIIEKLISNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLI
Sbjct: 184 DAHKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLI 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   E  AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR 
Sbjct: 244 FPHHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRK 303

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
           WP  V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T       D AV++AL +DLNT
Sbjct: 304 WPGAVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDAKPDEAVMNALADDLNT 363

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           V+A+QALH LA+ +  +  +   F A+A +LG+   K  +++ ++ A++ LV  RL +LK
Sbjct: 364 VAAVQALHALAQAAHTDAAVGATFAATAFLLGVLPKKAEIDEAVAAAVDALVAIRLEMLK 423

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 424 AKNFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 462


>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 461

 Score =  596 bits (1536), Expect = e-168,   Method: Composition-based stats.
 Identities = 175/482 (36%), Positives = 248/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA      I   +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A N +++F   + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSSCAHDGS-YVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +                    +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALDRLYTALRGTDASVAAHGGDEFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             ++      IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDEEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 465

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 174/486 (35%), Positives = 251/486 (51%), Gaps = 53/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF  ++ + + +Y CGPTVYDF H+GNAR  I FDV+   L+Y   E 
Sbjct: 1   MRIYNTLTRRKEEFIPLNGNKVTIYTCGPTVYDFFHVGNARVFITFDVIRNYLKYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA +E         +  +  +  +++ KD   L        PR
Sbjct: 60  -VKFVQNFTDIDDKMIKRANEE------GVTVKELGDRFIKEYFKDADALNIKRADVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AYE   ++ F     P YG  S + ++E + G RV     
Sbjct: 113 ATEHIEDIIEFIKVLIEKGYAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEPGEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK   P EP W SPWG GRPGWHIECSAM+  +LG+  DIHGGG DLIFPH
Sbjct: 173 KKDPIDFALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS      +  A  ++H G+LN+   KMSKS GNF T+ ++L       + +  
Sbjct: 233 HENEVAQSEAFTG-KPFARFFMHVGYLNINNEKMSKSLGNFFTVRDIL-------KEYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------- 350
            V+R  ML +HYR PI+F+ + L +++  L +      +   ++ A              
Sbjct: 285 EVLRFLMLSSHYRSPINFSRELLDQSKSALERLYNALYAMEHLENAAPERPLNGEEEEYL 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASAHILG-- 393
                       A+ +D NT  AI  L  + RE         + + +         LG  
Sbjct: 345 RRQLENKNKFKDAMDDDFNTAGAIAVLFDMIREFNVSLNENSSREAVKKTKEMVLELGGV 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +    +     +   IE+ ++ER    K K ++ AD IR +L ++G ILED         
Sbjct: 405 LGFFSKFEPVLLDEEIEQKIKEREEARKAKNYALADKIRDELRARGIILEDT------PA 458

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 459 GVRWKR 464


>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 461

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 186/482 (38%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      +  N++   +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------LENNESCEQLTTRMLAEMHKDFDALNLKRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I L + +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIALTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A  AL  +ARE  +         + L       AH+LG+      L     
Sbjct: 346 MDDDFNTPEAYSALFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+++R      K ++ AD  R QL   G +LED      G + T W+
Sbjct: 406 AQTNDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299286|sp|Q07ZX5|SYC_SHEFN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 460

 Score =  595 bits (1535), Expect = e-168,   Method: Composition-based stats.
 Identities = 182/480 (37%), Positives = 253/480 (52%), Gaps = 45/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R   EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYIGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L    P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRAAEN------NESCESLTERLIAEMHQDFDALNMKRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I ++Q ++   HAY A N +++F  +S P YG  S + +D+ + G RV    
Sbjct: 114 ATLHIEEIIDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGARVEIDN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS  NF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVL-------KHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A   L +             +           SA
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARAALERLYTALKGLDLTVDAAPAEAFVAKFKSA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGI------EVCKEH 400
           + +D NT  A   L ++ RE    K  D+             A +LG+         K  
Sbjct: 346 MDDDFNTPEAYSVLFEMVREINRLKTTDMAEASALGVSLKQLADVLGLISQTPEAFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R +L   G  LED      G   T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWPAADVARDRLNELGVELED-----GGPSGTTWRKK 460


>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 469

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 188/479 (39%), Positives = 265/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 12  LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYN- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 71  -LRYVRNITDVDDKIIKRA------LENNETCDELVDRMIAEMHKDFDALNILRPDVEPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 124 ATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 183

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 184 IKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 243

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 244 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 295

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R   L  HYR  +D+++  L  A   L +         +            A  +A
Sbjct: 296 AESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGGEHYVEAFKTA 355

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L ++ARE          K + L       A +LG+         K  
Sbjct: 356 MDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKGD 415

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N + +  IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 416 ANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPN------GTIWRK 468


>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123356646|sp|Q12L98|SYC_SHEDO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 459

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 185/480 (38%), Positives = 260/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T + T +  KD   L  + P  +P+
Sbjct: 61  -VNFQRNITDVDDKIIKRAAEN------NESCDALTERLTAEMHKDFDALNMVRPDFEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P++I ++Q ++  GHAY A + +++F  +S   YG  S + ID+ + G RV   +
Sbjct: 114 ATLHMPEIIEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEIDH 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 NKQNPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------KHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A   L +            T+           SA
Sbjct: 286 AQTVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAFKDLDLTVTAAPADEYVTKFKSA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + RE  +           L       A +LGI         K  
Sbjct: 346 MNDDFNTPEAYSVLFDMVREINRLKTTDMGAASALGVSMKQLADVLGIVSVDIETFFKGS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K +++AD  R +L   G +LED      G+  T WK+K
Sbjct: 406 GSDDEVAEIEALIVERNRARTEKDWAAADVARDRLNQLGVVLED------GENGTTWKKK 459


>gi|323705641|ref|ZP_08117215.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323535118|gb|EGB24895.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 464

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 269/488 (55%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  ++ + + MYVCGPTVY+F HIGNAR  IVFD + R L Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I+R+ +E      N  +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VNYVQNFTDIDDKLIKRSHEE------NTTVKELADRYIEEYFKDADSLGIKRATFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  ++ +I  G AYE +  + +DT+   +YG  S + IDE K G R+     
Sbjct: 113 ATENIKEIIEFVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNED 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK +   EP W+SPWG+GRPGWHIECS MS+ +LGK  DIH GG DLIFPH
Sbjct: 173 KKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKFLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  E  A  W+H G+LN+   KMSKS  NF T+ +++         +  
Sbjct: 233 HENEIAQSEAANDAE-FAKYWMHIGYLNINNEKMSKSKNNFFTVRDVIS-------QYDP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPA---- 350
            V+R  MLM+HYR PI+++   + +A+    +   T          +  + + D      
Sbjct: 285 EVLRFFMLMSHYRNPINYSQDLIEQAKNGYLRLSNTVYNLQHLLDVAEDRQLSDEEKAYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  + ++ R+   N D          +L +F   + +
Sbjct: 345 EKYEEYRRKFEEAMDDDFNTADAISVIFEMVRDINSNIDGNSPKELIKYILDVFLNLSSV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   K+ L   +   I++L+++R    K K ++ AD IR +L+ +G +LED  N    
Sbjct: 405 LGITYKKKEL---LDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVLEDTPN---- 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 --GVRWKR 463


>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 461

 Score =  595 bits (1534), Expect = e-168,   Method: Composition-based stats.
 Identities = 173/482 (35%), Positives = 264/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F+ + P  + MYVCG T+YD+ HIG+ R  + FD + R LR+     
Sbjct: 2   LKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y+RNITD+DDKII+RA +       N++   +TS+ T+   +D   L  L P  +PR
Sbjct: 60  SLNYIRNITDVDDKIIKRAAEN------NESCDQLTSRFTEAMHQDFDALFMLRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+H+P++I +I+ +I  GHAY A NN+++F   S   YG  S + ++  + G+RV  + 
Sbjct: 114 VTDHMPEVIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK + P EP W SPWG GRPGWHIECSAM+  +LG+VFDIHGGG DL FP
Sbjct: 174 SKRNPLDFVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS  NF TI E+L       + + 
Sbjct: 234 HHENEIAQSCCAHHG-QYVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVL-------KFFD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDPAVL 352
           +  +R  ++  HYR  ++++   L +A   L +   +                +     +
Sbjct: 286 SESVRYFLISGHYRSQLNYSEDNLKQARASLERLYNSVRDLTFSKDTPLDKTNLHYQQFI 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCK 398
            A+ +D NT  A+  L  LA+E  +              +    A++LG+      +  +
Sbjct: 346 KAMDDDFNTPGALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSAEQFLQ 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L+++R    + K ++SAD  R +L +   +LED      G   T W+
Sbjct: 406 GDEKNEEVAMIEALIKQRNDARQNKDWASADSARDKLAALKIVLED------GPGGTTWR 459

Query: 459 QK 460
           ++
Sbjct: 460 KQ 461


>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 458

 Score =  594 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 253/478 (52%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +             +T++       D   L  + P  +PR
Sbjct: 61  -LNYVRNVTDVDDKIIKRAAE------TGVTCDDLTARLIGDMHADFDALGMVRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+Q+++   HAY A+  +++F   S  +YG  S + +++ + G RV    
Sbjct: 114 ATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPA-VLSAL 355
           A  +R  ++  HYR  ++++   L +A   L +        P  + + G    A    A+
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAGGDEQVARFKEAM 345

Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEHL 401
            +D NT  A  AL  L RE  +           L         +LGI         K   
Sbjct: 346 DDDFNTPEAYSALFDLVREINRQKGEDMAVAAALGARLRELGAVLGILQQDPEAFLKGDE 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  IE+L+ +R      K +++AD  R +L   G +LED          T W++
Sbjct: 406 ADEEVAEIEQLIAQRNQARADKNWAAADAARNRLTEMGIVLEDS------AGKTSWRR 457


>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 458

 Score =  594 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 188/478 (39%), Positives = 265/478 (55%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDELVDRMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I +GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------IDPAVLSAL 355
           A  +R   L  HYR  +D+++  L  A   L +         +           A  +A+
Sbjct: 286 AESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGEHYVEAFKTAM 345

Query: 356 YNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEHL 401
            +D NT  A+  L ++ARE          K + L       A +LG+         K   
Sbjct: 346 DDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKGDA 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           N + +  IE L+++R      K ++ AD +R +L++   +LED  N       T W++
Sbjct: 406 NDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPN------GTIWRK 457


>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 457

 Score =  594 bits (1533), Expect = e-168,   Method: Composition-based stats.
 Identities = 189/477 (39%), Positives = 266/477 (55%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ I P    MYVCG TVYD+ H+G+AR ++VFD++ R LR    + 
Sbjct: 2   LNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA +        + I  +T++      +D   L  + P  +PR
Sbjct: 61  -LTYVRNITDIDDKIIKRAAEN------GEPIQALTARFIDAMNEDFDALGVIHPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P MI LI+ +I +G AY A N ++ +     P YG  S + +++ + G RV    
Sbjct: 114 ATEHVPGMIALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVDV 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W SPWG GRPGWHIECS MS H+LG+ FDIHGGG DL FP
Sbjct: 174 NKRDPFDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEGAHN-HDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----------VL 352
           A V+R  +L  HYR P++++   L +A+  L++      +    D A             
Sbjct: 286 AEVVRFFILRAHYRSPLNYSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEENDYARRFR 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGI--EVCKEHLN------ 402
            A+ +D NTV A+  L  LA E  +        +  A   +LG+     +E L       
Sbjct: 346 QAMDDDFNTVEAMAVLFDLAGEVNRGESAAQAGLLKALGAVLGLLQRAPQEFLQGGSTAA 405

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +  + AIE L+Q R      K ++ +D IR +L +KG ILED      G + T W++
Sbjct: 406 ELSADAIEALIQARRDARTAKNWAESDRIRDELAAKGVILED------GAQGTTWRR 456


>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 460

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 177/481 (36%), Positives = 252/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTDRLIGEMHVDFDSLNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L++ +I  G AY A+  +++F+      YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIELVEKLIERGFAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++   L +A   L +                         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDSNAAPAGGEEYVTRFTAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE          K  +L  +    A ++GI            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKTENVEKASELGALMRELADVIGILHQDPEAFLKGD 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +      IE L++ R      K +++AD  R +L   G +LED      G   T W++
Sbjct: 406 AGDDEEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GSEGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 459

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  EF+ I+P  I MYVCG T+YD  HIG+ R  + FD++ R LRY   E 
Sbjct: 2   LKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITD+DDKII+RA +       N++   +T +   +  +D   L  L P  +PR
Sbjct: 61  -VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ ++  GHAY A + +++F  +S P+YG  S + +D+ + G RV    
Sbjct: 114 ATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 NKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  ++++   L +A   L +             +           +A
Sbjct: 286 AETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIAKFKAA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A   L  + R+          K   L       A +LG+         K  
Sbjct: 346 MDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFFKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+ ER      K + +AD  R +L+  G +LED      G   T W++K
Sbjct: 406 GSDDEVAEIEALIVERNRARSEKDWVAADVARNRLDILGVVLED------GPSGTTWRKK 459


>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 461

 Score =  594 bits (1531), Expect = e-167,   Method: Composition-based stats.
 Identities = 174/482 (36%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA      I   +    +T++   +   D   L  + P  +PR
Sbjct: 60  SLKYVRNVTDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNIVHPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A N +++F   + P YG+ SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEITA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSRCAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +             +      +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDLSVAAHGGDEFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDVQAANQLASALRKLSGVLGLLEQDPEQFLQNG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             ++ +    IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDNDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|303240982|ref|ZP_07327492.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591407|gb|EFL61145.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 467

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 177/490 (36%), Positives = 256/490 (52%), Gaps = 59/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  I+   +RMY CGPTVY++ HIGNARP I+FD + R L Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPINEKEVRMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA +E         +  +  +  +++  D   L     T  P+
Sbjct: 60  -VKFVQNFTDIDDKMIKRANEE------GITVKDLADRFIKEYFIDAKGLGIDEATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I LI+ +  +G AY  N ++ F       YG  S   +++  +G+ V     
Sbjct: 113 ATENIDAIIDLIKKLEENGFAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSVNVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF +WK   P EP W+SPWG+GRPGWHIECSAM++ YLG+  DIH GG DLIFPH
Sbjct: 173 KQNPMDFAVWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNGF+N+   KMSKS GNF T+ +++E        +  
Sbjct: 233 HENEIAQSEAASG-KPFAKYWMHNGFINVNNEKMSKSAGNFFTVRDIVE-------KFDY 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA---- 350
            VIR  ML  HYR PI+F+   L +A+  L +            + + +K + D      
Sbjct: 285 EVIRFFMLSAHYRSPINFSADLLEQAQNGLERIYNCLDNLVYLGEHAQAKEMSDEEKSLQ 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLL------------PIFNASA 389
                     +  + +DLNT  AI A+  + +E   N                 +     
Sbjct: 345 SRLLEIKGKFIEGMDDDLNTADAIAAIFDIVKEVNSNITASSNSSKEIIDFSHSLIRELG 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LGI   ++  N  +   +E L+ +R    K K +  +D IR +L+  G +LED     
Sbjct: 405 GVLGIGQKQKENN--LDSEVEALISQRQQARKEKNWKLSDEIRDKLKDMGIVLEDT---- 458

Query: 450 NGQRMTRWKQ 459
              +  +WK+
Sbjct: 459 --PQGVKWKR 466


>gi|237803609|ref|ZP_04591194.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331025591|gb|EGI05647.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 460

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 258/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDTLTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        +  PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALRGLPVAAPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVPAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|61216191|sp|Q6D2E4|SYC_ERWCT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 461

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 177/482 (36%), Positives = 250/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHADQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA      I   +    +T++   +   D   L  L P  +PR
Sbjct: 60  SLKYVRNITDIDDKIIKRA------IENGETSDQLTTRMIAEMHADFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I +++ +I   HAY A N +++F   +   YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIADIIEMVETLITRRHAYVASNGDVMFSVDTASGYGVLSRQDLDQLRAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSCCAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLSA 354
              +R  ++  HYR  ++++   L +A   L +                    +     A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDPSVEAHGGDEFEARFHDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDVQAANQLASTLRKLSGVLGLLEQDPEQFLQNG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +N +    IE L+Q+R      K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVNDDEVKEIEALIQQRKDARATKDWALADQARDRLNEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 467

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 180/488 (36%), Positives = 262/488 (53%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+ ++ + + MYVCGPTVYD+ HIGNARP++VFD L R L Y   + 
Sbjct: 2   VRLYNTLTRKQEIFEPLNDNTVTMYVCGPTVYDYFHIGNARPLVVFDTLRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I+RA QE         +  +  +  Q++  D   L        PR
Sbjct: 61  -VKYVQNFTDIDDKMIKRANQE------GITVKELGDRFIQEYFVDAKGLNIRPADVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  MI  I+ +I  G AY  +  + FDTS  P YG  S +  +E + G RV     
Sbjct: 114 ATEHITDMIEFIKKLIDKGVAYVVDGNVYFDTSKFPQYGKLSHQDFNEIEAGARVEVNES 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK   P EP W+SPWG GRPGWH+ECS MS  YLG   DIHGGG DLIFPH
Sbjct: 174 KRNPMDFVLWKAQKPGEPAWDSPWGMGRPGWHMECSVMSMKYLGDTIDIHGGGQDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++G+KMSKS GNF T+ ++        + +  
Sbjct: 234 HENEIAQSESLTG-KPLARFWLHNGYINVDGQKMSKSLGNFFTVRDI-------SKEYDL 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
             +R+ ML++HYR PI+F+ Q L +A+  L++          I                 
Sbjct: 286 ETVRIFMLLSHYRSPINFSHQLLEQAKNALARLYNVKFRLEDIKNSSDISAVSEQERAFI 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHI 391
                     + A+ +D+NT SA+  +  LA++               +   +      +
Sbjct: 346 NDMPRYRQKFIEAMDDDMNTASAMGVIFDLAKDVNILMADGASAEFASEASDMLKELTGV 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +G+   K+     +   IE+++Q+R      + +++AD IR +L++ G +LED       
Sbjct: 406 MGLLY-KDSACSQLDNEIEQMIQKRQQARANRDWATADRIRDELKAMGIVLEDT------ 458

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 459 PQGVRWKR 466


>gi|167855009|ref|ZP_02477783.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853857|gb|EDS25097.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 459

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 180/479 (37%), Positives = 256/479 (53%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I P ++ MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPIYPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+R+      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRS------LENNETCDQLVDRMIIEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ ++  GHAY A + +++F+  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W+SPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L +   KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGDD-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILN-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
              +R   L   YR  +D++ + +  A   L +                      A   +
Sbjct: 286 CESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNVELAENDQYVTAFKES 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L +LARE  K         + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFELAREINKLKAENQVEANKLAARLKQLAGVLGLLEQDPETFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N +    IE L+++R      K ++ AD  R +L + G +LED      G   T W++
Sbjct: 406 ANNDEVAEIEALIKQRNEARASKNWAVADEARNKLTAMGIVLED------GANGTTWRK 458


>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 462

 Score =  593 bits (1530), Expect = e-167,   Method: Composition-based stats.
 Identities = 193/480 (40%), Positives = 271/480 (56%), Gaps = 45/480 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++IYN+L R    F  I+P  +RMYVCG T+YD+ HIG+AR M+ FDV+YR L+    E
Sbjct: 3   SLQIYNSLTRSKEVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKATGYE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKII RA +        + IS +TS+ TQ   +DT  L  L P H+P
Sbjct: 63  --VTYVRNITDIDDKIINRAAEN------GEPISSLTSRFTQYMHEDTCALGILPPDHEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT ++P+M+ LI  +  +G AY++ + ++ +       YG  S + +D+ + G RV   
Sbjct: 115 RATEYVPEMLELIGKLEKNGLAYQSTDGDVNYSVRDFEGYGKLSGKSLDDLRAGERVDIN 174

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF+LWK + P EP    W S WG GRPGWHIECSAMSS  LG+ FDIHGGG D
Sbjct: 175 TGKRDPLDFVLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGAD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++L       
Sbjct: 235 LQFPHHENEIAQSEGASH-HPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVL------- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
           +S+ A V+R  ++ +HYR P++++   L +A+  L++         + D A         
Sbjct: 287 KSYDAEVLRFFIIRSHYRSPLNYSDAHLDDAKNALTRLYTALKDVDVKDQAVDWDSEYAK 346

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGI--------EVCKE 399
              SA+ +D NT  A+  L +LA E  + H  +L     A A +LG+             
Sbjct: 347 RFASAMNDDFNTPEAVAVLFELANEVNRTHLAELGSQLKALAGVLGLLERDPRQFLQGDG 406

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +++     IE  +Q R+   K K F+ AD IR +L  KG +LED         +T W++
Sbjct: 407 AVDEGEEKWIESQIQARIDAKKAKNFAEADKIRSELLEKGIVLEDKPGG-----LTEWRR 461


>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 462

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 183/483 (37%), Positives = 260/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA +       N+++  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LNYVRNVTDIDDKIIKRAAEN------NESVEALTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L Q++I  GHAY A N +++F+  + PNYG  SR+ +++ + G RV    
Sbjct: 114 ATRHIGEIIELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +                        + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARSALERMYTALRGTDKSAVPAGGDEFKARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  + RE  +         + +       A +LG+      +     
Sbjct: 346 MNDDFNTPEAYSVLFDMVREVNRLKSEDMSAANGMAAQLRELASVLGLLEQDPEVFLKGG 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +      IE L+Q+RL   K K ++ AD  R +L + G +LED        + T W
Sbjct: 406 AQTEDDAEVAKIEALIQQRLDARKNKDWAQADAARDELTAMGIVLEDS------AQGTIW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|109894958|sp|Q31H54|SYC_THICR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 456

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 183/475 (38%), Positives = 261/475 (54%), Gaps = 42/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  I P+ + +YVCG TVYD+ H+G+AR M+VFD + R LR    + 
Sbjct: 3   LKIYNTETRQKETFTPIQPNKVGLYVCGVTVYDYCHVGHARVMVVFDTVVRHLRSLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        ++I  +TS+      +D   L  L P  +P+
Sbjct: 62  -VTYVRNITDIDDKIIQRALENK------ESIQSLTSRFIDAMHEDEKALNVLRPDMEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ ++  +I  +I    AY A N ++ F   +  +YG  S + I+E   G+RV    
Sbjct: 115 ATEYMDEIETMISTLIEKDFAYPAENGDVYFHVKADDDYGRLSGKNIEELDSGSRVEINS 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK S   EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGGLDL FP
Sbjct: 175 VKKDPLDFVLWKASKENEPAWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLSFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H GF+ ++  KMSKS GNF TI E+L       + + 
Sbjct: 235 HHENEIAQSECATGEH-YVNSWMHCGFVRIDDEKMSKSLGNFFTIREVL-------KQYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
             VIR  +L +HYR P++++ + L  A+  + +           Q   ++  ++   ++A
Sbjct: 287 PEVIRYFLLASHYRSPVNYSEENLDVAKASVGRLYSALELVPADQAEPAESKLEAEFMAA 346

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVC--------KEHLNKN 404
           + +D NT  A+  L +LA+E  K     L  +    A+ +G+           +   +  
Sbjct: 347 MNDDFNTPQAMAVLFELAKEVNKQKSPGLAALLKKLANQIGLLEQTAESFFKSQPSDSDL 406

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               IE L+ ER    K K FS +D IR +L ++G  L D          T W++
Sbjct: 407 TDEMIEALIVERAEARKAKDFSRSDEIRDELLAQGIELLDS------AEGTSWRK 455


>gi|327187990|gb|EGE55220.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 463

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 267/459 (58%), Positives = 343/459 (74%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++K+YNTL R+ + F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 4   TPELKLYNTLTREKSVFAPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           GE  VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P  
Sbjct: 64  GESHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNV 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G RV  
Sbjct: 124 EPRATDNIEEMIEIIEKLISNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLI
Sbjct: 184 DAHKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLI 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA   E  AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR 
Sbjct: 244 FPHHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRK 303

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
           WP  V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T       D AV++AL +DLNT
Sbjct: 304 WPGAVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDASPDEAVMNALADDLNT 363

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           V+A+QALH LA+ +  +  +   F A+A +LG+   K  +++ ++ A++ LV  RL +LK
Sbjct: 364 VAAVQALHALAQAAHTDAAIGATFAATAFLLGVLPKKAEIDEAVAAAVDALVAMRLEMLK 423

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K F+ AD IR QL +KG  L+D K+   G+R+T W+ K
Sbjct: 424 AKNFAEADKIRDQLTTKGIQLKDGKDAATGERVTTWEVK 462


>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 458

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 250/478 (52%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +             +T +       D   L  + P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRAAETRV------TCDELTERLIGDMHADFDALGMVRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L+Q+++   HAY A+  +++F   S  +YG  S + +++ + G RV    
Sbjct: 114 ATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
           A  +R  ++  HYR  ++++   L +A   L +         +   A           A+
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDEQVARFKEAM 345

Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEHL 401
            +D NT  A  AL  L RE  +           L         +LGI         K   
Sbjct: 346 DDDFNTPEAYSALFDLVREINRQKAEDMVVAAALGARLRELGAVLGILQQDPEAFLKGDE 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  IE+L+ ER      K +++AD  R +L   G +LED          T W++
Sbjct: 406 ADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDS------AGKTSWRR 457


>gi|213968819|ref|ZP_03396960.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|213926422|gb|EEB59976.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 466

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 258/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 8   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 67  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 120 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 179

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 180 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF T+ ++LE        + 
Sbjct: 240 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLE-------KYH 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          +PA          +A+
Sbjct: 292 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFTTAM 351

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 352 NDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 411

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 412 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 463


>gi|298486254|ref|ZP_07004317.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298159261|gb|EFI00319.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 460

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVARWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|229558797|sp|B6YUQ3|SYC_THEON RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 476

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 182/493 (36%), Positives = 250/493 (50%), Gaps = 60/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL ++  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 3   IRVYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA +        +    +  K  + F++D   L        PR
Sbjct: 61  TVLMVMNFTDIDDKIIRRANE------TGEDPKELAEKFLRYFLEDMKALKVKPADIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I  ++ +   G+AYE N+ + F+     +YG  S  K++E   G RV     
Sbjct: 115 VTEHIQDIIDFVRKLQEKGYAYEGNDGVYFEVRKFKDYGKLSGIKLEELVKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPH
Sbjct: 175 KKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E     W+H GF+ + G KMSKS GNF+TI ELL       + +  
Sbjct: 235 HENEIAQSEACTGHE-WVRYWLHTGFVMVSGEKMSKSLGNFVTIRELL-------QKYSP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            VIR  +L  HYR P+D+T + +  A+  L +   T  +                     
Sbjct: 287 EVIRFFVLQKHYRSPLDYTEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWDEEEFEL 346

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
                        A+ +D NT  A++A+ +++    +                L  F   
Sbjct: 347 YETVREARKKFYDAMDDDFNTAEALKAVFEVSNAVNRYLTKVEKPKESVLRKALEFFKIV 406

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           + + G+  +  KE    +    IE LV  R  L K + F+ AD IR +L++ G  LED  
Sbjct: 407 SEVFGLFEDYFKEQKAGDEEALIELLVSVRAELRKQRNFTLADKIRDELKALGIQLEDT- 465

Query: 447 NPDNGQRMTRWKQ 459
                 + T WK+
Sbjct: 466 -----PQGTIWKR 473


>gi|257483826|ref|ZP_05637867.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|289625911|ref|ZP_06458865.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651301|ref|ZP_06482644.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330868387|gb|EGH03096.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330890007|gb|EGH22668.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330985629|gb|EGH83732.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 460

 Score =  593 bits (1529), Expect = e-167,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|205372089|ref|ZP_03224906.1| cysteinyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 467

 Score =  592 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 163/489 (33%), Positives = 248/489 (50%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D + R L Y   
Sbjct: 1   MSIQLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V N TD+DDK+I+ A +      + + +  I  +    + +DT  L C      
Sbjct: 61  --AVNFVSNFTDVDDKLIKAANE------LGEDVPTIAERFIDAYFEDTAALGCSKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T +I  +I  I  ++  G+AYE+  ++ + T     YG  S + I++ + G R+   
Sbjct: 113 PRVTENIDIIIEFISALMDKGYAYESQGDVYYRTKKFEGYGKLSHQPIEDLQSGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   E  W SP+G+GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKEDPLDFVLWKAAKEGEIYWSSPFGKGRPGWHIECSAMVRKYLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWMHNGYINIDNEKMSKSLGNFVLVHDII-------KET 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              V+R  ML  HYR PI+++   +   +  L +   T                      
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSADLVENTKTALDRLRTTYQNITYRKESSVNLGEGTEKWV 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
                +    + A+ +D NT +AI  L  L+++                +    F     
Sbjct: 345 GQIAELKKQFIQAMDDDFNTANAISVLFDLSKQGNYYLMEENTEVRVLDEFTQTFEELFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+++  E   + +   IEKL++ER+   K   F  +D IR +L+    +LED      
Sbjct: 405 VLGLKLSGEA--ELLDEEIEKLIEERIQARKNCDFKRSDEIRDKLKEMNIVLEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|219870367|ref|YP_002474742.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254781682|sp|B8F392|SYC_HAEPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219690571|gb|ACL31794.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 459

 Score =  592 bits (1528), Expect = e-167,   Method: Composition-based stats.
 Identities = 179/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I P ++ MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPIHPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+R+      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRS------LENNETCDQLVDRMIIEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ ++  GHAY A + +++F+  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W+SPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H G L +   KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGDD-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILN-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
              +R   L   YR  +D++ + +  A   L +                      A   +
Sbjct: 286 CESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNVELVENDQYVTAFKES 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L +LARE  K         + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFELAREVNKLKAENQAEANKLAARLKQLAGVLGLLEQDPETFLQGD 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N +    IE  +++R      K ++ AD  R +L + G +LED      G   T W++
Sbjct: 406 ANNDEVAEIEAFIKQRNEARASKNWAVADEARNKLTAMGIVLED------GANGTTWRR 458


>gi|225181302|ref|ZP_03734747.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225168082|gb|EEG76888.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 469

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 178/493 (36%), Positives = 264/493 (53%), Gaps = 59/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++NTL RK  EF  ++   + +Y CGPTVYD+ HIGNAR  IVFDV+ R LR+   
Sbjct: 1   MSVRVFNTLTRKKEEFVPVEGKKVGIYACGPTVYDYFHIGNARIFIVFDVIRRYLRWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V+N TDIDDK+I+RA +      +   +  +  +  + + +D   L        
Sbjct: 61  D--VTFVQNFTDIDDKMIKRANE------LGITVPELAERYIEAYFEDVEALGVEPADEH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI +M+ LIQ +   G AYE + ++ F T +  NYG  S + +DE + G RV   
Sbjct: 113 PKATEHIEEMVELIQKLEAKGMAYEVDGDVYFHTPAFDNYGELSHQPLDELESGARVDVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF+LWK+  P EP WESPWG+GRPGWHIECS MSS YLG   DIH GG DLIF
Sbjct: 173 ERKKHPLDFVLWKKQKPGEPAWESPWGKGRPGWHIECSVMSSKYLGDTLDIHAGGPDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS  A   +  A  W+H G+LN+   KMSKS GNF+T+ E+        +  
Sbjct: 233 PHHENEKAQSEGATG-QPFAKYWLHAGYLNINQEKMSKSLGNFMTVREIR-------KQI 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPA--- 350
              ++R  ML  HYR PI+++   L +A+  L +      +         +G  D A   
Sbjct: 285 DPQIVRFFMLSAHYRNPINYSPDLLEQAKSGLDRLNNVVYNLRDLLEKLPEGQGDSADAT 344

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
                        + A+ +D NT   +  L  +ARE+                 L +F  
Sbjct: 345 ERLAALEAHRGRFVEAMDDDFNTADGLAVLFDVARETNAYLKNAQVSRQVVEKTLALFEE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LG    ++  ++++   + +++++R    K K +++AD IR QL++ G +LED   
Sbjct: 405 LGSVLG--FFQKQDDEDLDATVNEMIEKRQAARKEKDWATADAIRDQLQAMGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQK 460
                +  RW++K
Sbjct: 461 ----PQGIRWRRK 469


>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 460

 Score =  592 bits (1527), Expect = e-167,   Method: Composition-based stats.
 Identities = 184/481 (38%), Positives = 258/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDAIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N++   +T++   +   D   L  L P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRA------IENNESCDDLTTRMLAEMHNDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIEITETLIERGHAYVAANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKQGEPSWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLG-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +                    +     A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTSLRGTDKSAQPAGGAGFEARFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLN--- 402
           + +D NT  A   L  +ARE  +         + L       A ILG +E   EH     
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKAEDIVAANGLAAELRKLAGILGLLEQEPEHFLQGG 405

Query: 403 ---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               +    IE L+++R    K K+++ AD  R QL   G  LED      G + T W++
Sbjct: 406 AQVDDDVAQIEALIKQRNDARKNKEWALADAARNQLNELGIELED------GPQGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|293392469|ref|ZP_06636789.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424871|gb|EFE98080.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 461

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII RA +        +    +T +   +   D   L    P  +PR
Sbjct: 61  -LNYVRNVTDVDDKIIRRAAEN------GETCDQLTGRMLAEMHADFDALLIERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L + +I  GHAY A N +++F   S  +YG  SR+ +D+ + G RV    
Sbjct: 114 ATQHIAEIIELTERLIARGHAYVASNGDVMFAIDSDADYGLLSRQDLDQLQAGARVEVDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLG-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDPLATPDGGAEFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-------- 398
           + +D NT  A  AL  LARE  +  +        +       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSALFDLAREVNRLKNEDMAAANAMAAELRKLAKVLGLLQQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    K K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIKQRNDARKSKDWALADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|300715706|ref|YP_003740509.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061542|emb|CAX58656.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 462

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 181/483 (37%), Positives = 258/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        + + ++T++   +  KD   L  L P  +PR
Sbjct: 60  SLNYVRNITDIDDKIIKRANEN------GETVEVLTNRMIGEMHKDFAALNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I ++  +I   HAY A N +++F   S P YG  SR+ +++ + G RV  + 
Sbjct: 114 ATRHISEIIEIVSKLIDREHAYVASNGDVMFSVPSDPQYGQLSRQDLEQLQAGARVEVEQ 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKANEPSWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 PHHENEIAQSTCAHEG-PYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QHF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
            A  +R  ++  HYR  +++    L +A   L +                  + +     
Sbjct: 286 DAETVRCFLMSGHYRSQLNYGEDNLKQARSALERLYTAIRNTDSSAEPAGGEVFETRFRE 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
           A+ +D NT  A  AL  +ARE  +         + L       A +LG+      L    
Sbjct: 346 AMDDDFNTPEAYSALFDMAREVNRLKAEDMSAANGLAAKLRQLAGVLGLLEQDPELFLQN 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               N +    IE L+++RL   + K ++ AD  R +L + G +LED      G + T W
Sbjct: 406 GAQSNDDEVAEIEALIRQRLDARREKNWAQADMARDKLVAMGIVLED------GPQGTSW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|122985612|sp|Q1H417|SYC_METFK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 455

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 195/475 (41%), Positives = 265/475 (55%), Gaps = 42/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R    F  I P  + MYVCG TVYD+ H+G+AR M+VFD++ R LR    E 
Sbjct: 2   LKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + I+ +T +      +D  RL    P  +PR
Sbjct: 61  -VTYVRNITDIDDKIIARANEN------GETINALTDRFIAAMNEDAARLGVWRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I +MI +I  +I   HAY A+  ++ +  SS  +YG  S + +++ + G RV    
Sbjct: 114 ATDYIHEMIAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSGKSLEDLRAGERVEVDA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HK++P DF+LWK + P EP W+SPWG GRPGWHIECSAM + +LG  FDIHGGG DL FP
Sbjct: 174 HKRDPMDFVLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEGAHGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIREVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVLS 353
           A V+R  +L  HYR P++++   L +A+  L++   T   + +                 
Sbjct: 286 AEVVRFFILRAHYRSPLNYSSHHLDDAKQALTRLYNTLRGRELPQLDIDWRQPEAERFKQ 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGI------EVCKEHLNKNI 405
           AL +D NT  A   L +LA E+ +        +  A A  LG+      E  K      +
Sbjct: 346 ALDDDFNTPEAFAVLFELASEANRTGSAVQAALLKALAGQLGLLQRDPDEFLKGEAVAGL 405

Query: 406 S-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           S   IE+L+ ERL   K K F+ AD IR  L ++G ILED        + T W++
Sbjct: 406 SPDEIERLIAERLAARKCKNFAEADRIRDALTAQGIILEDT------PQGTSWRR 454


>gi|28870897|ref|NP_793516.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|301384135|ref|ZP_07232553.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302059502|ref|ZP_07251043.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302134322|ref|ZP_07260312.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|37999386|sp|Q87YQ2|SYC_PSESM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28854146|gb|AAO57211.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|331018326|gb|EGH98382.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 460

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 258/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF T+ ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFTTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|192290599|ref|YP_001991204.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|229558783|sp|B3QCS4|SYC_RHOPT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|192284348|gb|ACF00729.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 491

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 232/489 (47%), Positives = 308/489 (62%), Gaps = 34/489 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL R    F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MELRLYDTLTRDKRPFTPIDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +
Sbjct: 61  EAHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
           PRAT HI +M  +I+ ++  G AY   + ++F  S++       P YGS + R +DE   
Sbjct: 121 PRATEHIGEMRSIIEKLVAGGFAYVEQDHVLFSPSAMNAANGVLPRYGSLANRSLDEMIA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
           G RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHENE+AQSCCA   ++ A  W+HNGFL +EG KMSKS GNFITI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTKRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELL 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGII 347
            T KFGGRSW    +RLAML THYR+PID+TV  L EA+  ++K+ +T           +
Sbjct: 301 ATNKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALEEAQKRVAKYRRTLERFRGGKNVEV 360

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPIFNASAHIL 392
              V+SAL +DLNT +AI  L  L R +                 N        AS  +L
Sbjct: 361 PHGVVSALSDDLNTHAAITELDALNRRANGVTHEGPTSEADALAANAIAADELRASLRLL 420

Query: 393 GIEVCKE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           GI V  E    +N+     I++L+  R      K +  +D IR +L + G +L+D K+ D
Sbjct: 421 GISVASERSGAVNQIFDQNIQRLIAVRTAARANKDWKESDRIRDELAAMGVVLKDGKDAD 480

Query: 450 NGQRMTRWK 458
            G+ +T W+
Sbjct: 481 -GKPVTTWE 488


>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 460

 Score =  592 bits (1526), Expect = e-167,   Method: Composition-based stats.
 Identities = 173/479 (36%), Positives = 259/479 (54%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F   +   + MYVCG T YD  HIG+AR  + FDV+ R LR    + 
Sbjct: 3   LTLFNTLTREKETFTPREAGRVGMYVCGVTTYDLCHIGHARTYVAFDVVVRYLRKIGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII+RA +        +    +T +   +  +D   L  L P  +PR
Sbjct: 62  -VTYVRNITDLDDKIIKRAAEN------GEPFDALTQRYIDEMHRDFAALNLLEPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+  +I +I++++  G+AY+A+  +++FD S+  +YG  SR+ +++ + G RV  + 
Sbjct: 115 VTQHMDDIIRMIESLVTQGYAYQADNGDVLFDVSTFDDYGRLSRQNLEQLQAGARVDVEA 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W+SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DL FP
Sbjct: 175 SKLDPLDFVLWKKAKAGEPSWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSDLTFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA++     N W+H+G + ++  KMSKS GNF TI ++L        ++ 
Sbjct: 235 HHENEIAQSCCANQTN-YVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVLN-------AYD 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------AVLS 353
           A  +R  +L +HYR  +++T   L +A   L +            P              
Sbjct: 287 AETVRYFLLSSHYRSQLNYTQDNLEQAHAALERLYTALRGLTPEQPDENLRLPYWNQFTD 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI-----EVCKEH 400
           A+ +D N   A+  L +L RE  K  D        L  +    A +LG+     E   + 
Sbjct: 347 AMNDDFNAPEAMSVLFELVREINKARDNDAERAAQLAHVLVELADVLGLLQQSPESFLQG 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +    IE L+ +R      K +++AD  R +L   G +LED      G   T+W++
Sbjct: 407 GADDEVALIEALIAQRNKARAEKDWAAADEARDRLTEMGIVLED------GANGTQWRR 459


>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|109894945|sp|Q2NV45|SYC_SODGM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 457

 Score =  591 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 178/477 (37%), Positives = 255/477 (53%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDI+DKII RA +        +    +T +   +   D  +L  L P  +PR
Sbjct: 61  -VNYVRNITDIEDKIIRRAAEN------GETFHQLTERMISEMHSDFDQLNILRPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I  +I L+  +I   HAY A N +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATHYIDAIIELVGQLIDRDHAYVAANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DLIFP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N+W+H G + ++  KMSKS GNF T+ ++L       R + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVL-------RYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                        ++A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIALRGTDATAVPAGGDHFVAQFIAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCK-----EHLN 402
           + +D NT  A   L  +ARE  +          +       A +LG+   +     +   
Sbjct: 346 MDDDFNTPKAYSVLFDIAREVNRLKSEQPAAQGMAATLRQLAGVLGLLEQEPAAFLQQGA 405

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              ++ IE L+Q+R    K ++++ AD  R +L + G +LED      G + T W++
Sbjct: 406 AEDNVMIEALIQQRNDARKARQWALADEARDKLTALGIVLED------GPQGTTWRR 456


>gi|229591304|ref|YP_002873423.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511840|sp|C3JYD3|SYC_PSEFS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229363170|emb|CAY50215.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 462

 Score =  591 bits (1525), Expect = e-167,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 257/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFDALTERMIAAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++         + PA            +
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAGGEAFVARFTEVM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMKPEDFLQAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    ++ L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGRVDAAEVDALIQARLAARANKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|167036780|ref|YP_001664358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167039500|ref|YP_001662485.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|256752501|ref|ZP_05493358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300915250|ref|ZP_07132565.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307725174|ref|YP_003904925.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115202|ref|YP_004185361.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|229558799|sp|B0KCH9|SYC_THEP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558800|sp|B0K5F6|SYC_THEPX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166853740|gb|ABY92149.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166855614|gb|ABY94022.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|256748636|gb|EEU61683.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|300888974|gb|EFK84121.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307582235|gb|ADN55634.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928293|gb|ADV78978.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 466

 Score =  591 bits (1524), Expect = e-167,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 257/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF+ ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y   + 
Sbjct: 1   MKLYNTLSRTKEEFEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K  +++  D   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIEEYFIDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSEAAYG-QPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
            V+RL MLM HYR PI+F++  + +A+    +      +   +                 
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQAKSAYERLLNAVANLKHLLTVCKDRELNEEEKRIK 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++++ +  N            +L IF   + I
Sbjct: 345 EKFEEYKKEFEDAMDDDFNTADAISVLFEMSKTANTNISGNSSKKLVEYILDIFLKLSEI 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   +    +     I  L++ER    K K +  AD IR +L  KG ILED       
Sbjct: 405 LGLSY-RGVETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDT------ 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 PEGVRWKR 465


>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 465

 Score =  591 bits (1524), Expect = e-167,   Method: Composition-based stats.
 Identities = 179/488 (36%), Positives = 261/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K   F  I+   +RMY CGPTVY++ HIGNARP IVFDVL R L Y   + 
Sbjct: 1   MKLYNTLTQKKEAFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII R+ +E          + +  K   ++ KD   L        PR
Sbjct: 60  -VKFVQNFTDVDDKIINRSIEE------GITAAEVADKYIAEYFKDADALGIRRADVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++H+P++I +I+ +   G AY  +  + +      +YG  S++ ID+ K G R+     
Sbjct: 113 VSDHMPEIIEMIKELEARGLAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK+    EP WESPWG+GRPGWHIECSAMS  +LG+  DIHGGG DLIFPH
Sbjct: 173 KRSPLDFALWKKKKDGEPYWESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  +   +  AN W+HNG++N+   KMSKS GNF T+ ++        + +  
Sbjct: 233 HENEIAQSEGSCGCK-FANYWVHNGYININNEKMSKSKGNFFTVRDI-------AKHYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------------- 341
            V+R+ MLM HYR P++F+ + L +A+  L +                            
Sbjct: 285 EVVRMFMLMAHYRSPVNFSDELLGQAQNALERLYNAKYQMEYLLENNKSEAASEDEKTWM 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
            +        + A+ +DLNT  AI A+ +L R++  N             L +F     +
Sbjct: 345 DNLAQYKKGFIDAMNDDLNTADAIAAIFELVRDTNSNLSEASSREAVKAALDLFKELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +G+   ++  +  +   +E L+ +R    K K FS AD IR  L +KG ILED +     
Sbjct: 405 IGLAAKEKETD--LEAEVEALIAQRQEARKNKDFSLADEIRDALLAKGIILEDTR----- 457

Query: 452 QRMTRWKQ 459
               +WK+
Sbjct: 458 -EGVKWKK 464


>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710839|sp|B6EH43|SYC_ALISL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 462

 Score =  591 bits (1524), Expect = e-167,   Method: Composition-based stats.
 Identities = 175/483 (36%), Positives = 258/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +       N++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------NESCEALTERLIAEMHADFDALKMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--PE 181
           AT +I +++ L++ +I  G AY A N +++F+      YG  SR+ +++ + G+RV   E
Sbjct: 114 ATEYITEIVELVERLIERGFAYVASNGDVMFEVKKFDEYGRLSRQDLEQLQAGSRVTLEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+
Sbjct: 174 TSVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLM 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDAK-YVNTWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
           + +  +R  ++  HYR  ++++ + L +A   L +            T            
Sbjct: 286 YDSETVRYFLMSGHYRSQLNYSEENLNQARSSLERLYTSLRGLDLTVTPAGGETFVTRFS 345

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
           +A+ +D NT  A   L ++ARE  +           L  +    A +LG+   +      
Sbjct: 346 TAMNDDFNTPEAYSVLFEMAREVNRLKTENIEAASKLGALMRELAEVLGLLSQEPEAFLQ 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               + N    IE L++ R      K +S+AD  R  + +   +LED      G   T W
Sbjct: 406 GDSGSDNEVAEIEALIKARNDARAAKDWSAADAARDAITALNIVLED------GPEGTTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 470

 Score =  591 bits (1524), Expect = e-167,   Method: Composition-based stats.
 Identities = 184/480 (38%), Positives = 257/480 (53%), Gaps = 44/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I+NT+ RK  EF+ I+   I MYVCG TVYD  HIG+AR  + FD++ R LRY   
Sbjct: 13  PMLQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYLRYRGY 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+RNITDIDDKII+RA +         +   +      +  KD   L  + P  +
Sbjct: 73  K--VRYIRNITDIDDKIIKRAHERKV------SAKELAENFIVEMHKDFDALNIMRPDEE 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IP++I L+Q +I +G+AY A+  +++F   +   YG  S + ++E + G R+  
Sbjct: 125 PRATETIPEIIALVQRLIDNGNAYVADNGDVMFAIDTFKQYGRLSGQNLEELEAGARIEI 184

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+  YLG+ FDIHGGG DLI
Sbjct: 185 EKTKRNPFDFVLWKMSKPGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLI 244

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA   +   N W+H+G + +   KMSKS  NF TI ++LE        
Sbjct: 245 FPHHENEIAQSCCACHSK-YVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLE-------H 296

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLS 353
           + A  IR  +L   YR P+++T + L +A+  L++            +  +         
Sbjct: 297 YDAETIRFFLLSAQYRSPLNYTQENLDKAKASLARLYTALRDVVPVKAEGEDEYTKRFKE 356

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-----DLLPIFNASAHILGIEVC--------KEH 400
            + +D NT  A+  L  LA+   K        L         +LGI            E 
Sbjct: 357 LMDDDFNTPGAMAVLFDLAKAVNKEEGETKAKLAGRLVELGSVLGILYQNPSSFLKGAES 416

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+QER      K F +AD  R +L + G +LED      G   T W++K
Sbjct: 417 SDNDEVSVIEALIQERKDARARKDFKAADAARDKLTAMGIVLED------GPSGTTWRRK 470


>gi|70731271|ref|YP_261012.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|109894922|sp|Q4K9S1|SYC_PSEF5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68345570|gb|AAY93176.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 460

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 255/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +A   +T +      +D  RL    P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEAFEALTERMIAAMHEDEARLNIKKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHTMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKAAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++         + PA            +
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAGGEAFVERFTQVM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIDAAAGLAARLKELASVLGVLQLEADDFLQAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G ILED K        T W+
Sbjct: 406 EGRVDGAQVEALIQARLAARANKDWAESDRIRDQITAMGVILEDGK------GGTTWR 457


>gi|312171645|emb|CBX79903.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 507

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 188/485 (38%), Positives = 253/485 (52%), Gaps = 49/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   
Sbjct: 45  SMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGY 104

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  + YVRNITDIDDKII+RA +        ++I  +T +   +  KD   L  L P  +
Sbjct: 105 Q--LNYVRNITDIDDKIIKRAHEN------GESIEQLTQRMIGEMHKDFAALNILPPDLE 156

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I L++ +I   HAY A N +++F   S   YGS SR+ +D+ + G RV  
Sbjct: 157 PRATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEV 216

Query: 182 KYH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 217 TADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 276

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A       N W+H+G + ++  KMSKS  NF T+ ++LE       
Sbjct: 277 MFPHHENEIAQSTSAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE------- 328

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAV 351
            + A  +R  ++  HYR  +++    L +A   L +            T       +   
Sbjct: 329 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARF 388

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH--- 400
            +A+ +D NT  A  AL  LARE  +           L         +LG+         
Sbjct: 389 RAAMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFL 448

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                +N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   T
Sbjct: 449 QSGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGT 502

Query: 456 RWKQK 460
           RW++K
Sbjct: 503 RWRRK 507


>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|109894889|sp|Q3A9P1|SYC_CARHZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 465

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 191/486 (39%), Positives = 261/486 (53%), Gaps = 53/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +   EF   +P  + MYVCGPT Y++ HIGNARP++ FD + R   Y   E 
Sbjct: 1   MKIYNTLTKTKEEFIPREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFEYKGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII RA +E        +   +  K   ++ KD  RL     T  P+
Sbjct: 60  -VIYVQNFTDIDDKIINRALEE------GISPIELGQKYIIEYFKDADRLGVKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I +++ +I  G+AYE    + F   S  +YG  S R ++E K G RV     
Sbjct: 113 VTEHIPEIIEMVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARVEVDEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 173 KKNPLDFALWKKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS      +  A  W+HNGF+ +   KMSKS GNF  + E+LE        +P 
Sbjct: 233 HENEVAQSEAFTG-KPFARYWMHNGFITVNQEKMSKSLGNFFLVREILE-------KFPG 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  +L THYR P+DF  ++L EA+  L +      +   ++P               
Sbjct: 285 RVVRFFLLSTHYRSPLDFDDKKLNEAKAALERVDNFVQNLKEVNPLPGEARIEIQEKITN 344

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
                  A+ +D NT  A+ +L +L R                       N    + GIE
Sbjct: 345 FLRDFNEAMEDDFNTAQAMASLFELVRFGNTQIASGNLTAGDKKLFEEALNVYTQVFGIE 404

Query: 396 V--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               ++   ++I+  +E L++ R  L K KK+  AD+IR +L+ +G ILED        +
Sbjct: 405 FGVLEKIAGEDITPFVELLIEVRARLKKEKKYDLADFIRDELKKQGIILEDT------PK 458

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 459 GVRWKR 464


>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 463

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 180/484 (37%), Positives = 257/484 (53%), Gaps = 50/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA +       N+    +TS+   +  KD   L    P  +P 
Sbjct: 60  SLTYVRNVTDVDDKIIKRAAEN------NETCDQLTSRMLAEMHKDFDALNLERPDLEPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L+Q +I   HAY A N +++F   S P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHISEIIQLVQRLIERDHAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +             +      +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGMDTNAVAAGGEEFEARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH------ 400
           + +D NT  A   L  +ARE  +         + L       AH+LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGLAAELRKLAHVLGLLAQDPEQFLQSS 405

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               ++ N    IE L+++R      K ++ AD  R +L   G +LED        + T 
Sbjct: 406 AQTDVDNNEVSEIEALIKQRNDARSSKDWALADSARDRLNEMGIVLEDS------PQGTI 459

Query: 457 WKQK 460
           W++K
Sbjct: 460 WRRK 463


>gi|302188937|ref|ZP_07265610.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 460

 Score =  591 bits (1523), Expect = e-166,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI +++E        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVVE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + + A          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEAAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|38372510|sp|Q7VMA0|SYC_HAEDU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 459

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 186/479 (38%), Positives = 267/479 (55%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL+R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY     
Sbjct: 2   LKIYNTLKREKEEFKPINPAQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N++   +  +   +   D   L  + P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNESCEALVERMIAEMHNDFDALNIMRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +++ +I++GHAY A + +++FD +S   YG+ SR+ +D+ + G RV  K 
Sbjct: 114 ATEHIAEIIAMVEKLIMNGHAYVAADGDVMFDVTSFNQYGALSRQNLDQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWKRS   EP W SPWG GRPGWHIECSAM++  LG+ FDIHGGG DL+FP
Sbjct: 174 AKKNPMDFVLWKRSKENEPSWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA + E   N W+H G L ++  KMSKS GNF +I  +L         + 
Sbjct: 234 HHENEIAQSCCAHQGE-YVNYWLHTGMLTIDKEKMSKSVGNFFSIRHMLGL-------YD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R   L  HYR  +D++   L  A   L +             +        A  +A
Sbjct: 286 AESLRYFFLTAHYRSLLDYSTDNLDLARSALERLYTALRGCDLSVQANGGENYVTAFKTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT +A+  L ++ARE  K         + L       A +LG+         K  
Sbjct: 346 MDDDFNTPAALAVLFEMAREVNKLKTEDQQQANALAVCLKELAAVLGLLTQDPDNFLKGE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +N + +  IE L+Q+R      K ++ AD +R +L++   +LED          T W++
Sbjct: 406 VNIDQTAEIEALIQQRNQAKANKNWAVADQVRGKLKAMNILLEDTPT------GTVWRK 458


>gi|71736729|ref|YP_273919.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|109894921|sp|Q48L06|SYC_PSE14 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71557282|gb|AAZ36493.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 460

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 462

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/483 (37%), Positives = 257/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LQIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII+RA +       N+++  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LNYVRNVTDIDDKIIKRAAEN------NESVEELTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L +++I  GHAY A+  +++F+  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L       + + 
Sbjct: 234 HHENEIAQSTCAHEG-PYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVL-------QYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +                          A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDKSVAPAGGEAFKARFCEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + +       A +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDIAREINRLKTEDMAAANGMAAQLRELAKVLGLLEQEPEAFLQGG 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +      IE L+++R    + K ++ AD  R  L + G +LED          T W
Sbjct: 406 AQGEDDAEVAKIEALIKQRNDARQSKDWALADQARDALTAMGVVLEDSSA------GTTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|251788870|ref|YP_003003591.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247537491|gb|ACT06112.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 461

 Score =  590 bits (1522), Expect = e-166,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 256/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA          + I  +T++   +   D   L  L+P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIKRA------TENGETIEQLTNRMIGEMHTDFQALNILSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I ++I L++ +I   HAY A+  +++F   + P YG  SR+ +D+ K G RV    
Sbjct: 114 ATHYIAEIIELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLDQLKAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +   N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGD-YVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLT-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSA 354
           A  IR  ++  HYR  +++T + L +A   L +                    +     A
Sbjct: 286 AETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDASASAAGGEAFERRFRDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           L  +    A +LG+  C   L     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDAAAANGLAAMLRQLAGVLGLLECDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    + K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|312961737|ref|ZP_07776235.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311283996|gb|EFQ62579.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 462

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +A   +T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEAFDALTERMIAAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++         + PA            +
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAGGEAFVARFTEVM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARTNKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|123131947|sp|Q0I1Q1|SYC_HAES1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 459

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 183/479 (38%), Positives = 256/479 (53%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII R+      +   +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIRRS------LENRETCEQLVDRMVVEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY A+  +++FD  S   YG  SR+ + + + G RV    
Sbjct: 114 ATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGNR-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +                          A
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLDLAHGALERLYTALRGTDKSAVAFGGENFIAQFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEH 400
           + +D NT +AI  L ++ARE  +  +        L       A ILG+      +  +  
Sbjct: 346 MNDDFNTPNAISVLFEMAREINRLKNEDKLLADGLAARLRELAGILGLLEQDPEDFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +      IE L+++R    + K ++ AD  R +L + G ILED      G   T W++
Sbjct: 406 SDDAEIAKIEALIKQRNDARQAKDWARADAARNELTTMGVILED------GSNGTMWRK 458


>gi|146307594|ref|YP_001188059.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|187629851|sp|A4XVG1|SYC_PSEMY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145575795|gb|ABP85327.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 461

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 189/478 (39%), Positives = 262/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    FQ +  + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR    + 
Sbjct: 3   LSIYNTLTKTKDVFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        +    +  +      +D  RL+ L P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIKRANEN------GEPFEALVERMIAAMHEDEARLSVLRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M  +IQ +I  G+AY   N ++ +  +    YG  SRRKIDE K+G R+    
Sbjct: 115 ATGHIAGMHQMIQTLIDKGYAYAPGNGDVYYRVTRFETYGKLSRRKIDELKIGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 175 IKEDPLDFVLWKGAKPGEPSWDSPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 235 HHENEIAQSEAATG-KQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++           PA           A+
Sbjct: 287 PEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAGGEAYVERFGVAM 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH------- 400
            +D N+  A   L ++ RE  +  +        L       A +LG+   +         
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLRESDVQAAAGLAAQLKQLASVLGVLQLEPEAFLQAGA 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+  RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 407 AGKVDAAEVEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 458


>gi|254172364|ref|ZP_04879039.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033293|gb|EEB74120.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 476

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/493 (36%), Positives = 252/493 (51%), Gaps = 60/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 3   IRIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA +        +    +  +  + F++D   L        PR
Sbjct: 61  TVLMVMNFTDIDDKIIKRANE------TGEDPKELAERFLRIFLEDMKALKVKPADVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+ ++I  ++ +   G+AYE ++ + F+     +YG  S+ K+++   G RV     
Sbjct: 115 VTEHMDEIINFVKKLEEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E   + W+H GFL + G KMSKS GNF+T+ ELL       + +  
Sbjct: 235 HENEIAQSEACFGHE-WVHYWMHTGFLMVNGEKMSKSLGNFVTVRELL-------KRYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------------- 342
            VIRL +L  HYR P+D++ + +  A+  L +   T                        
Sbjct: 287 EVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMGRAEISFRWDEPEFRV 346

Query: 343 --SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
             +          A+ +D NT  A++A+ +++    +                   F   
Sbjct: 347 YEAIRDARRKFYEAMDDDFNTAEALKAVFEVSNAINRYLTEVETPKESILRKAWEFFRDV 406

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             + G+  +  KE    N    I+ L++ R  L K +KF  AD IR +L   G  LED  
Sbjct: 407 GEVFGLFEDYFKEQRAGNEEALIDLLIEVRAQLRKERKFDLADRIRDELRKLGIQLEDT- 465

Query: 447 NPDNGQRMTRWKQ 459
                 + T WK+
Sbjct: 466 -----PQGTVWKR 473


>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 467

 Score =  590 bits (1521), Expect = e-166,   Method: Composition-based stats.
 Identities = 183/489 (37%), Positives = 271/489 (55%), Gaps = 55/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ RK  EF  ++   ++MYVCGPTVY+F H+GNARP  VFD L R   Y   E 
Sbjct: 1   MKVYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII+R+ +E        +   +  K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIIKRSHEE------GISPEEVAEKYIKEYFIDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I ++I  IQ+++  G+AYE+N +++F T     YG  S + I+E ++G R+     
Sbjct: 113 VTDNIKEIISFIQDLVDKGYAYESNGDVLFRTREFKEYGKLSHQNIEELELGARIDVDDK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MSS YLG   DIH GG DL FPH
Sbjct: 173 KEDPLDFVLWKAKKDGEPGWKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQDLQFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     AN W+HNG++N++G KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSECRNG-HVFANYWMHNGYINVDGEKMSKSLGNFFTVREIAE-------KYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GII 347
            ++R  +L THYR P++F+   L +A+  L +      +                  G++
Sbjct: 285 GLVRFFLLSTHYRNPVNFSDTILDQAKAGLERLTNARDNAEFMMSKLEDTKMSPEETGLV 344

Query: 348 DP------AVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
           D         + A+ +DLNT  AI A+ +LA+    N             + +FN    +
Sbjct: 345 DELNSYKTKFIEAMDDDLNTSDAISAIFELAKFMNTNIKDTSSKEFIGLNIDLFNELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I       N +++  +E+++ +R    K K F+ AD IR++L   G ++ED +     
Sbjct: 405 LNIANKSVEENDDLARTVEEMIAKRAEAKKNKDFALADKIREELLEMGIVIEDTR----- 459

Query: 452 QRMTRWKQK 460
            +  +WK+K
Sbjct: 460 -QGVKWKRK 467


>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082066|sp|B0UVH6|SYC_HAES2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 459

 Score =  589 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 257/479 (53%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIRRALENK------ETCEQLVDRMVVEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY A+  +++FD  S   YG  SR+ + + + G RV    
Sbjct: 114 ATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEISE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA       N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGNR-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A   L +                          A
Sbjct: 286 AESVRYFLLTAHYRSQLNYSEENLDLAHGALERLYTALRGTDKSAVSFGGENFIAQFTEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEH 400
           + +D NT +AI  L ++ARE  +  +        L       A ILG+      +  +  
Sbjct: 346 MNDDFNTPNAISVLFEMAREINRLKNEDKLLADGLAARLRELASILGLLDQDPEDFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +      IE+L+++R    + K ++ AD  R +L + G ILED  N       T W++
Sbjct: 406 SDDAEIAKIEELIKQRNDARQAKDWARADAARNELTTMGVILEDSSN------GTMWRK 458


>gi|330897806|gb|EGH29225.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 460

 Score =  589 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 261/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|270157070|ref|ZP_06185727.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269989095|gb|EEZ95349.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 464

 Score =  589 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/475 (37%), Positives = 258/475 (54%), Gaps = 40/475 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN+L R    F +I P  I +YVCG TVYD  HIG+AR M+ FDV+ R LR    
Sbjct: 10  NMLHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGY 69

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+RNITDIDDKII RA +    I        +T++      +DT  L  L P  +
Sbjct: 70  D--VKYIRNITDIDDKIIARAHERAIPI------DELTAQYIAAMNEDTQALNILPPDVE 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+HI  +I+LI+ ++  G+AY ++  ++ +  +S  +YG  S + ++    G RV  
Sbjct: 122 PRATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEI 181

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK++   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGGLDL 
Sbjct: 182 VKEKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQ 241

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   +  AN W+H G L +   KMSKS GNF TI ++L         
Sbjct: 242 FPHHENEIAQSEAAT-EKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKH------ 294

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIID----PAVL 352
               V+R  +L +HYR  ++++ + L  A+  L++  QT       + G +D        
Sbjct: 295 -HPEVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADGELDNHWINEFN 353

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------VCKEHLNKN 404
            A+ +D NT  A+  + +L+ E  K++   L        + +G+         +  L+  
Sbjct: 354 QAMNDDFNTPVALSVMFQLSHEVNKSNSPILAATLKYLGNTMGLLLTDPSSFLQSGLDDE 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              +IE+L+ ERL     + +  AD IR  L S+G  LED      G   T W++
Sbjct: 414 DKASIEQLINERLQARTERNWERADQIRADLLSRGIELED------GANGTTWRK 462


>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 461

 Score =  589 bits (1520), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 255/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA          + I  +T++   +   D   L  L+P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIRRA------TENGETIEQLTNRMIDEMHTDFRALNILSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I ++I L++ +I   HAY A+  +++F   + P YG  SR+ +++ K G RV    
Sbjct: 114 ATHYIAEIIELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +   N W+H+G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGD-YVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLS-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  IR  ++  HYR  +++T + L +A   L +             +      +     A
Sbjct: 286 AETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDASVPAAGGEAFEHRFRDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           L       A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKADDAAAASGLASALRQLAGVLGLLEHDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+++R    + K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|330952785|gb|EGH53045.1| cysteinyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 460

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 262/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIGAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPLAEPAGGEAFVERFSAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +  +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVNAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254781696|sp|B8GNT5|SYC_THISH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 460

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 186/480 (38%), Positives = 264/480 (55%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+N+L R+   F  ++P  +RMYVCG TVYD+ H+G+AR ++VFDV+YR L+    + 
Sbjct: 2   LQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+RNITDIDDKII RA +        + I  +T +      +D   L  L P+ +PR
Sbjct: 61  -VTYIRNITDIDDKIIRRAAEN------GEDIRALTDRFIAAMHEDAEALGVLPPSAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M+ +I  ++  G+AY  +  ++ +  +    YG  S +++++ + G RV    
Sbjct: 114 ATEHIDGMLAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DL FP
Sbjct: 174 AKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ +   KMSKS GNF T+ E+L         +P
Sbjct: 234 HHENEIAQSEAATCEH-FVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLAR-------YP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A V+R  +L +HYR P++++ + L  A   L++          +DPA           +A
Sbjct: 286 AEVVRYFILSSHYRSPLNYSDEPLDAARAGLTRLYTALRGVQAVDPAGQGEGYRRRFQAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE---------------VCKE 399
           + +D NT  A+  L  +ARE  +  D  P   A    L  E               +   
Sbjct: 346 MDDDFNTPVAMAVLFDIARELNRLRDEDPAGAAPLAGLLRELGGMLGLLAGDPEAFLKGG 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                   AIE L+ +RL   K K F+ AD IR +L  +G +LED      G   T W++
Sbjct: 406 EAGDLDEAAIEALIAQRLAARKAKDFAEADRIRDELAGQGVVLED------GPGGTTWRR 459


>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
           30120]
 gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
           30120]
          Length = 462

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 183/483 (37%), Positives = 259/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TDIDDKII+RA +       N+++  +T++   +  KD   L  L P  +PR
Sbjct: 61  -VNYVRNVTDIDDKIIKRAAEN------NESVEELTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L +++I  GHAY A+  +++F+  + P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPSYGLLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +            T     I       A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSATPAGGEIYKSRFCEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A  AL  +ARE  +         + +       A +LG+            
Sbjct: 346 MNDDFNTPEAYSALFDMARELNRLKTENMDAANGMAAQLRELAKVLGLLEQDPETFLQGG 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +      IE L+++R    + K ++ AD  R  L + G +LED          T W
Sbjct: 406 AQSEDDAEVAKIEALIKQRNDARQSKDWALADQARDALTAMGIVLEDSSA------GTTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|66044980|ref|YP_234821.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75502675|sp|Q4ZVN9|SYC_PSEU2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|63255687|gb|AAY36783.1| Cysteinyl-tRNA synthetase, class Ia [Pseudomonas syringae pv.
           syringae B728a]
          Length = 460

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 262/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIEAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR ++ + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDRITAMGVLLEDGK------GGTTWR 457


>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 474

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 183/493 (37%), Positives = 250/493 (50%), Gaps = 60/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 1   MKVYNTLTKQKEEFKPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA++        +    +  K  + F++D   L        PR
Sbjct: 59  TVLMVMNFTDIDDKIIRRAQE------TGEDPKELAEKFLKYFLEDMKALKVKPADIYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I  ++ +   G+AYE ++ + F+     +YG  S  K++E + G RV     
Sbjct: 113 VTEHIEDIIDFVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK++ P EP W+SPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPH
Sbjct: 173 KRNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSTMSTKYLGEQFDIHGGGNDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      E     W+H GF+ ++G KMSKS GNF+TI ELL       + +  
Sbjct: 233 HENEIAQTEACTGKE-WVRYWLHTGFVMVKGEKMSKSLGNFVTIRELL-------QRYSP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
            VIR  +L  HYR P+D+T + +  A+  L K   T  +  I                  
Sbjct: 285 EVIRFFVLQKHYRSPLDYTEEGIQHAKNNLEKLYNTIENIRIALEKAEIPFKWSKEEFEL 344

Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
                        A+ +D NT  A++ + ++A    K                L  F   
Sbjct: 345 YEVIREAKRKFYEAMDDDFNTAEAMKPIFEVANAVNKYLAKVEKPKESVLRKALEFFKMV 404

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             + GI  E  KE         IE L+Q R  L K K ++ AD IR +L   G  LED  
Sbjct: 405 GEVFGIFEEYFKETKETKEEELIELLIQVRAELRKQKNYALADKIRAELRELGIQLEDT- 463

Query: 447 NPDNGQRMTRWKQ 459
                 + T WK+
Sbjct: 464 -----PQGTIWKR 471


>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|187629827|sp|A1WT89|SYC_HALHL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 459

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 186/478 (38%), Positives = 258/478 (53%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L      FQ I+P  +R+YVCG TVYDF H+G+AR ++VFD + R LR+   E 
Sbjct: 2   LKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYLRWLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + ++ +T +  +   +D + L    P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAAEN------GEPMTALTDRFIRAMHEDCSALGVEPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  MI LI+ +I  GHAY  +  ++ F  +S P YG  S R+++E + G+R+    
Sbjct: 114 ATERLESMIALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSGRRVEELRSGSRIEPDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP W SPWG GRPGWHIECSAMS   LG  FDIHGGG+DL FP
Sbjct: 174 AKHDPVDFVLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+HNG + ++  KM+KS GNF T+ ++L          P
Sbjct: 234 HHENEIAQSECASG-HRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEH-------P 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------VLSALY 356
           A V+RL +L +HYR P+++T   L EA   L +            PA          A+ 
Sbjct: 286 AEVVRLFLLSSHYRSPLNYTGDALDEARGGLERLYNALRGLPAAAPARSQARERFREAMD 345

Query: 357 NDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL------ 401
           +D NT  A+  L   ARE  +  +                   +LG+             
Sbjct: 346 DDFNTREALAVLFDGAREINRLREAGDASGAASAAAELRELGAVLGLLQQDPEAYLRGDV 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               +  IE LV +R    K K F+ AD IR +L+++G  LED          T+W++
Sbjct: 406 ADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARGIELEDT------PEGTKWRR 457


>gi|300023350|ref|YP_003755961.1| cysteinyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525171|gb|ADJ23640.1| cysteinyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 469

 Score =  589 bits (1519), Expect = e-166,   Method: Composition-based stats.
 Identities = 229/470 (48%), Positives = 299/470 (63%), Gaps = 22/470 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  IDPSN+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG +
Sbjct: 3   LKLYNTLTRQKAEFAPIDPSNVRMYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGPE 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA ++ P +P+NDAI  +T    +QF +D   L  L PT +PR
Sbjct: 63  HVTYVRNITDVDDKINARAARDFPDLPLNDAIRKVTEATEKQFHEDIAALGVLPPTFEPR 122

Query: 125 ATNHI------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           AT +I        M+ LI+ ++  G+AY A + ++FD +S+P+YG  S R +DE + G R
Sbjct: 123 ATEYIRRDDGRETMVSLIEALVQRGNAYVAEDHVLFDVASMPDYGRLSNRSLDEMEAGAR 182

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHG 235
           V    +KK P DF+LWK S P EP W SP G    GRPGWHIECSAM+   LG  FDIHG
Sbjct: 183 VEVAPYKKGPMDFVLWKPSKPGEPAWPSPCGIATPGRPGWHIECSAMAGALLGPEFDIHG 242

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHENEIAQS CA      AN+W+HNGFL +EG KMSKS GNF+TINELL   
Sbjct: 243 GGIDLTFPHHENEIAQSRCAHGTPFMANVWMHNGFLQVEGEKMSKSLGNFVTINELLSD- 301

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIIDPAV 351
                 WP  V+R  ML THYR+PID+T + L E++ +LS W      ++  +  + PA 
Sbjct: 302 -----GWPGEVLRFNMLRTHYRQPIDWTKKGLEESQKILSGWFSQNGLSTDDRTELSPAF 356

Query: 352 LSALYNDLNTVSAIQALHKL--ARESTKNHDLLPIFNASAHIL-GIEVCKEHLNKNISIA 408
           L AL +DLNT  AI  LH    A+++T+    L         L   +       ++++  
Sbjct: 357 LDALADDLNTPKAIAELHGFATAKDATRLGAALSFLGFDGATLKKADARAAETAQSVASK 416

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +E L+  RL   K K F+ +D IR +L   G  L+D KN + G+  T W+
Sbjct: 417 VEPLIIARLDARKRKDFAESDRIRDELAKMGISLKDAKNKETGEIETTWE 466


>gi|226328546|ref|ZP_03804064.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
 gi|225203279|gb|EEG85633.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
          Length = 463

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 186/482 (38%), Positives = 263/482 (54%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 61  -VNYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNIARPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIELTEALIKLGHAYVADNGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVAN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNSKELGHHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +   +                +   + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDENAQPVGGEAFEAQFIDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHL---- 401
           + +D NT  A   L  LARE  +         + L  +    A +LG +E   EH     
Sbjct: 346 MNDDFNTPEAYSVLFDLAREVNRLKAVDMNAANGLAAVLRKLAKVLGLLEQEPEHFLQSG 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               + +    IE L+Q+R    K K +++AD  R  L + G +LED      G + T W
Sbjct: 406 AKADDASEVEKIELLIQQRNDARKNKDWAAADVARDALTAMGIVLED------GPQGTVW 459

Query: 458 KQ 459
           ++
Sbjct: 460 RR 461


>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 461

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 177/482 (36%), Positives = 249/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII RA          ++   +T++   +   D   L    P  +PR
Sbjct: 60  SLNYVRNVTDVDDKIIRRA------TENGESCDQLTARMLAEMHADFDSLLIERPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I + Q +I   HAY A N +++F   S P YG  SR+ +D+ + G RV    
Sbjct: 114 ATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEIDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCAHDG-PYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDANAQPAGGEAFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A  AL  LARE  +         + L       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSALFDLAREVNRLKGEDMAAANGLAAELRKLAKVLGLLQQEPEQFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    K K ++ AD  R +L     +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIKQRNDARKAKDWALADAARDRLNEMSIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|259511844|sp|C5A739|SYC_THEGJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
          Length = 476

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 183/493 (37%), Positives = 252/493 (51%), Gaps = 60/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+  EF+ +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 3   IRIYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA +        +    +  K  + F++D   L        PR
Sbjct: 61  TVLMVMNFTDIDDKIIKRANE------TGEDPKELAEKFLRIFLEDMKALKVKPADIYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +I  I+ +   G+AYE ++ + F+     +YG  S+ K+++   G RV     
Sbjct: 115 VTEHMQDIISFIKKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPGEG 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFPH
Sbjct: 175 KRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E   + W+H GFL + G KMSKS GNF+T+ ELL       + +  
Sbjct: 235 HENEIAQSEACFGHE-WVHYWMHTGFLMVNGEKMSKSLGNFVTVRELL-------KRYNP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------------- 341
            VIRL +L  HYR P+D++ + +  A+  L +   T                        
Sbjct: 287 EVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMSKAEISFRWDEPEFRA 346

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
             +          A+ +D NT  A++A+ +++    +                   F   
Sbjct: 347 YEAIRDARKKFYEAMDDDFNTAEALKAVFEVSNAINRYLTEVEKPKESILRKAWEFFKDV 406

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             + G+  +  KE   +N    I  LV+ R  L K KKF  AD IR++L   G  LED  
Sbjct: 407 GEVFGLFEDYFKEQKAENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLGIQLEDT- 465

Query: 447 NPDNGQRMTRWKQ 459
                 + T WK+
Sbjct: 466 -----PQGTVWKR 473


>gi|289164517|ref|YP_003454655.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
 gi|288857690|emb|CBJ11533.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
          Length = 454

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/473 (37%), Positives = 258/473 (54%), Gaps = 40/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R    F +I P  I +YVCG TVYD  HIG+AR M+ FDV+ R LR    + 
Sbjct: 2   LHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII RA +    I        +T++      +DT  L  L P  +PR
Sbjct: 61  -VKYIRNITDIDDKIIARAHERAIPI------DELTAQYIAAMNEDTQALNILPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  +I+LI+ ++  G+AY ++  ++ +  +S  +YG  S + ++    G RV    
Sbjct: 114 ATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIVK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGGLDL FP
Sbjct: 174 EKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G L +   KMSKS GNF TI ++L           
Sbjct: 234 HHENEIAQSEAAT-EKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLAKH-------H 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIID----PAVLSA 354
             V+R  +L +HYR  ++++ + L  A+  L++  QT       + G +D         A
Sbjct: 286 PEVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADGELDNHWINEFNQA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------VCKEHLNKNIS 406
           + +D NT  A+  + +L+ E  K++   L        + +G+         +  L+    
Sbjct: 346 MNDDFNTPVALSVMFQLSHEVNKSNSPILAATLKYLGNTMGLLLTDPSSFLQSGLDDEDK 405

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +IE+L+ ERL     + +  AD IR  L S+G  LED      G   T W++
Sbjct: 406 ASIEQLINERLQARTERNWERADQIRADLLSRGIELED------GANGTTWRK 452


>gi|320325346|gb|EFW81413.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320327670|gb|EFW83678.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330882429|gb|EGH16578.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 460

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 258/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +R+YVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRIYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++          +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|310766910|gb|ADP11860.1| Cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 462

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 188/483 (38%), Positives = 254/483 (52%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY     
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +  +D   L  L P  +PR
Sbjct: 60  HLKYVRNITDIDDKIIKRANEN------GESIERLTNRMIDEMHQDFAALNILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I   HAY A N +++F   S P YGS SR+ +D+ + G RV    
Sbjct: 114 ATRHIAEIIELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 PHHENEIAQSTCAHDG-PYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QHY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLS 353
            A  +R  ++  HYR  +++    L +A   L +            T       +     
Sbjct: 286 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARFRE 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
           A+ +D NT  A  AL  LARE  +           L         +LG+           
Sbjct: 346 AMDDDFNTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPEQFLQS 405

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
              +N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   TRW
Sbjct: 406 GVNINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTRW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|330959375|gb|EGH59635.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 460

 Score =  589 bits (1518), Expect = e-166,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ R+  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVRDINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|307266362|ref|ZP_07547900.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918598|gb|EFN48834.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 466

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 255/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   E + ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y   + 
Sbjct: 1   MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIDEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSEAAY-EQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----------- 353
            V+RL MLM HYR PI+F++  + +A     +      +   +                 
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQANSAYERLLNAVANLKHLANVCKDGGLNEEEKKLM 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ S  N            +L +F   + +
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTSNANLSRNSSKKLVEYILDMFLKLSEV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   +    +     I  L++ER    K K +  AD IR +L  KG ILED       
Sbjct: 405 LGLSY-RGVETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDT------ 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 PEGVRWKR 465


>gi|15596992|ref|NP_250486.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|218892253|ref|YP_002441120.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254240136|ref|ZP_04933458.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|21264027|sp|Q9I2U7|SYC_PSEAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735063|sp|B7VB84|SYC_PSEA8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|9947777|gb|AAG05184.1|AE004605_6 cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126193514|gb|EAZ57577.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218772479|emb|CAW28261.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 460

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 256/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++                       +A+
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D NT  A   L +LARE  +  +        L       A +LG+   +         
Sbjct: 346 DDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|313110488|ref|ZP_07796373.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310882875|gb|EFQ41469.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 460

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 256/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++                       +A+
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D NT  A   L +LARE  +  +        L       A +LG+   +         
Sbjct: 346 DDDFNTAGACAVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|77459860|ref|YP_349367.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|109894924|sp|Q3KA28|SYC_PSEPF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77383863|gb|ABA75376.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 460

 Score =  588 bits (1517), Expect = e-166,   Method: Composition-based stats.
 Identities = 175/478 (36%), Positives = 255/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   + 
Sbjct: 2   LTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T +      +D  RL    P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFEALTERMIAAMHEDEARLNIKKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++         + PA            +
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAGGEAFVERFTQVM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    ++ L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGRVDAAEVDALIQARLTARANKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
          Length = 465

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 177/488 (36%), Positives = 259/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 1   MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E        +   + +K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIINRSHEE------GISPEEVAAKYIKEYFVDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  +  W+HNG++N+   KMSKS GNF T+ ++        + +  
Sbjct: 233 HENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------------- 342
            ++R  ML  HYR P++F+ + L +A+  L +   T                        
Sbjct: 285 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 344

Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     + A+ +D+NT  A+  + +LA+    N D           L  FN    +
Sbjct: 345 KELDGFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I   K+  +  +   IE+L+Q+R    K K+F  AD IR+QL   G +LED +     
Sbjct: 405 LNIVNKKK--DTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR----- 457

Query: 452 QRMTRWKQ 459
            +  +WK+
Sbjct: 458 -QGVKWKR 464


>gi|239825672|ref|YP_002948296.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511835|sp|C5D3P6|SYC_GEOSW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239805965|gb|ACS23030.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 466

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 182/489 (37%), Positives = 261/489 (53%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   
Sbjct: 2   SSIRLYNTLTRKKELFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV N TD+DDK+I+ AR+      + + +  I  +  Q + +D T L C      
Sbjct: 62  E--VKYVSNFTDVDDKLIKAARE------LGEDVPTIAERFIQAYFEDITALGCKKADVH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T +I  +I  IQ +I  G+AYE + ++ + T     YG  S + IDE K G R+   
Sbjct: 114 PRVTENIDTIIEFIQTLIDRGYAYEVDGDVYYRTRKFKEYGKLSHQSIDELKAGARIEVG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 174 EKKEDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       +  
Sbjct: 234 PHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------QQI 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIID---- 348
              V+R  ML  HYR PI+++ + L  A+  L +            Q+ST+    D    
Sbjct: 286 DPQVLRFFMLSVHYRHPINYSEELLESAKKGLERLKTSYFNLKHRLQSSTNLTDDDDQWL 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A +  + +D NT + I  L +L++++              H  L  F     
Sbjct: 346 ARIQEQHEAFIREMDDDFNTANGIAVLFELSKQANLYLLEKNTSERVIHAFLREFEQLLD 405

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI + +E L          L+Q+R    K + F+ AD IR +L++K  ILED      
Sbjct: 406 VLGITLQEEELLDEEIE---ALIQKRNEARKNRNFALADQIRDELKAKNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
 gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
 gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
 gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
          Length = 467

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 177/490 (36%), Positives = 259/490 (52%), Gaps = 57/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   
Sbjct: 1   MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII R+ +E        +   + +K  +++  D   L     T  
Sbjct: 61  D--VTYVQNFTDVDDKIINRSHEE------GISPEEVAAKYIKEYFVDCDGLGIKRATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+   
Sbjct: 113 PQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL F
Sbjct: 173 DQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  +  W+HNG++N+   KMSKS GNF T+ ++        + +
Sbjct: 233 PHHENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
              ++R  ML  HYR P++F+ + L +A+  L +   T                      
Sbjct: 285 DLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVE 344

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASA 389
                       + A+ +D+NT  A+  + +LA+    N D           L  FN   
Sbjct: 345 LVKELDGFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELT 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +L I   K+  +  +   IE+L+Q+R    K K+F  AD IR+QL   G +LED +   
Sbjct: 405 GVLNIVNKKK--DTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR--- 459

Query: 450 NGQRMTRWKQ 459
              +  +WK+
Sbjct: 460 ---QGVKWKR 466


>gi|126697618|ref|YP_001086515.1| cysteinyl-tRNA synthetase [Clostridium difficile 630]
 gi|122974209|sp|Q18CD5|SYC_CLOD6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 468

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 177/490 (36%), Positives = 259/490 (52%), Gaps = 57/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   
Sbjct: 2   MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII R+ +E        +   + +K  +++  D   L     T  
Sbjct: 62  D--VTYVQNFTDVDDKIINRSHEE------GISPEEVAAKYIKEYFVDCDGLGIKRATVH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+   
Sbjct: 114 PQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL F
Sbjct: 174 DQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  +  W+HNG++N+   KMSKS GNF T+ ++        + +
Sbjct: 234 PHHENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
              ++R  ML  HYR P++F+ + L +A+  L +   T                      
Sbjct: 286 DLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVE 345

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASA 389
                       + A+ +D+NT  A+  + +LA+    N D           L  FN   
Sbjct: 346 LVKELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELT 405

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +L I   K+  +  +   IE+L+Q+R    K K+F  AD IR+QL   G +LED +   
Sbjct: 406 GVLNIVNKKK--DTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR--- 460

Query: 450 NGQRMTRWKQ 459
              +  +WK+
Sbjct: 461 ---QGVKWKR 467


>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 504

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 189/486 (38%), Positives = 265/486 (54%), Gaps = 50/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL R+  EF+ I P  I MYVCG T+YD  HIG+ R  + FDV+ R LRY   
Sbjct: 41  SMLKIYNTLSRQKEEFRPITPGKIGMYVCGVTIYDLCHIGHGRTFVAFDVISRYLRYLGY 100

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +TYVRNITD+DDKII+RA +       N+    +TS+   +  KD   L  L P  +
Sbjct: 101 D--LTYVRNITDVDDKIIKRAAEN------NETCDALTSRMLIEMYKDFDALNILRPDFE 152

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P AT+HI ++I L + ++  GHAY A+  +++F  +S P+YG  SR+ +++ + G RV  
Sbjct: 153 PNATHHIKEIIALTERLLKRGHAYIADNGDVMFAINSDPDYGLLSRQDLEQLQAGARVEV 212

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+
Sbjct: 213 ADVKRNPLDFVLWKMSKPNEPSWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGGADLM 272

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA+      N W+H G + ++  KMSKS  NF TI ++L         
Sbjct: 273 FPHHENEIAQSTCANDG-PYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLA-------H 324

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
           + A  +R  +L  HYR  +++T + L +A   L +              S    I     
Sbjct: 325 YDAETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTALRDTDANHVKSADNEIFKQRF 384

Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGI------EVC 397
           ++A+ +D NT  A   L  LARE  +         ++L       A+ILG+      +  
Sbjct: 385 MAAMNDDFNTPEAYSVLFDLAREINRLKVDDMAMANELAVQLRQLANILGLLTQNPEQFL 444

Query: 398 KEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           +     + S     IE L+++R    K K ++ AD  R +L   G ILED        + 
Sbjct: 445 QSRAQVSHSAEIEKIEALIKQRNDARKNKFWAQADSARDELTRMGIILEDS------PQG 498

Query: 455 TRWKQK 460
           T W++K
Sbjct: 499 TVWRRK 504


>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
 gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Clostridium difficile]
          Length = 465

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 177/488 (36%), Positives = 259/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 1   MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E        +   + +K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIINRSHEE------GISPEEVAAKYIKEYFVDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  +  W+HNG++N+   KMSKS GNF T+ ++        + +  
Sbjct: 233 HENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------------- 342
            ++R  ML  HYR P++F+ + L +A+  L +   T                        
Sbjct: 285 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 344

Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     + A+ +D+NT  A+  + +LA+    N D           L  FN    +
Sbjct: 345 KELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I   K+  +  +   IE+L+Q+R    K K+F  AD IR+QL   G +LED +     
Sbjct: 405 LNIVNKKK--DTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR----- 457

Query: 452 QRMTRWKQ 459
            +  +WK+
Sbjct: 458 -QGVKWKR 464


>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 460

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 177/481 (36%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  +    + MYVCG T+YD  HIG+ R  + FD + R LR+   + 
Sbjct: 2   LKIYNTLSKQKEEFTPLVAGKVSMYVCGVTIYDNCHIGHGRTFVAFDSVVRYLRFKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + ++RNITD+DDKII+RA +       N++   +T++ T+   +D   L  L P  +PR
Sbjct: 61  -LNFIRNITDVDDKIIKRANEN------NESCDALTARFTKAMHRDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+P +I +I+ +I   HAY A N +++F  SS   YG  S + +D  + G RV  + 
Sbjct: 114 VTEHMPDVIAMIKTLIEKQHAYVASNGDVLFSVSSFDGYGKLSGQNLDMLQAGARVDVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK S   EP WESPWG GRPGWHIECSAMS  +LG +FDIHGGG DL FP
Sbjct: 174 SKHDPLDFVLWKMSKENEPSWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      AN W+H+G + ++  KMSKS  NF TI ++LE       ++ 
Sbjct: 234 HHENEIAQSCCAHDA-TYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLE-------AYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVLS 353
           A  +R  ++  HYR  ++++   L +A   L +         I D           A   
Sbjct: 286 AESVRYFLISGHYRSQLNYSEDNLKQARASLERLYTALRDVDISDAPIAKDNSHYQAFCK 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGI------EVCKE 399
           A+ +D NT  A+  L +LA+   K          +L  +     ++LG+      +  + 
Sbjct: 346 AMDDDFNTPEALAVLFELAKALNKAKLSADKSAPELALLLRTLGNVLGLLDQSADDFLQG 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +      IE L+++R      K ++SAD  R QL +   +LED      G   T W++
Sbjct: 406 DESSAEVEKIELLIKQRNDARANKDWASADDARAQLSALNIVLED------GANGTTWRK 459

Query: 460 K 460
           +
Sbjct: 460 Q 460


>gi|92117041|ref|YP_576770.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|123083715|sp|Q1QN87|SYC_NITHX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91799935|gb|ABE62310.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 482

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 248/480 (51%), Positives = 316/480 (65%), Gaps = 25/480 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL ++   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLL++ YG
Sbjct: 1   MELRLYDTLTKEKRAFIPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLQHIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI +RA ++ P +P+N+AI  +T K  +QF  D   L CL PTHQ
Sbjct: 61  TDHVTYVRNITDVDDKINDRAARDFPGLPLNEAIRKVTEKTAEQFQADVAALGCLPPTHQ 120

Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT  +         M+ LI+ +I  GHAYEA  E++FD  S+P+YG+ S R+++EQK 
Sbjct: 121 PRATEFVLPRDDGRADMVTLIKQLIARGHAYEAGGEVLFDVQSMPDYGALSGRRLEEQKA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G RV    HK+NPADF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARVAVDAHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHG 240

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF TINELL T+
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHTMANYWMHNGFLQVEGEKMSKSLGNFFTINELLTTE 300

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----GIIDPAV 351
           KFGGR WP  V+RLAML THYR PID+TV  L E++ +L  W           G +D  V
Sbjct: 301 KFGGRKWPGEVLRLAMLKTHYRSPIDWTVDALEESKRILDSWYDIVGDDTEAIGEVDREV 360

Query: 352 LSALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
            + L +DLNT +A+  LH +A     +      D       SA +LG+     +E+L  +
Sbjct: 361 SAFLGDDLNTSAAVTRLHAIAASRIGKSGQLQIDAKRKLKVSAVMLGLLGRTKREYLETD 420

Query: 405 ------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                  S  +  L+ +R      K F  +D IR +L + G +L+D K+ D     T W+
Sbjct: 421 PQVILVDSNLVAHLLSDRAAARARKDFKESDRIRDELAAMGVVLKDGKDADGKPE-TTWE 479


>gi|292487539|ref|YP_003530411.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|291552958|emb|CBA20003.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 502

 Score =  588 bits (1516), Expect = e-166,   Method: Composition-based stats.
 Identities = 188/485 (38%), Positives = 253/485 (52%), Gaps = 49/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   
Sbjct: 40  SMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGY 99

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  + YVRNITDIDDKII+RA +        ++I  +T +   +  KD   L  L P  +
Sbjct: 100 Q--LNYVRNITDIDDKIIKRAHEN------GESIEQLTQRMIGEMHKDFAALNILPPDLE 151

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI ++I L++ +I   HAY A N +++F   S   YGS SR+ +D+ + G RV  
Sbjct: 152 PRATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEV 211

Query: 182 KYH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 212 TADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 271

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A       N W+H+G + ++  KMSKS  NF T+ ++LE       
Sbjct: 272 MFPHHENEIAQSTSAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE------- 323

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAV 351
            + A  +R  ++  HYR  +++    L +A   L +            T       +   
Sbjct: 324 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARF 383

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH--- 400
            +A+ +D NT  A  AL  LARE  +           L         +LG+         
Sbjct: 384 RAAMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFL 443

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                +N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   T
Sbjct: 444 QSGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGT 497

Query: 456 RWKQK 460
           RW++K
Sbjct: 498 RWRRK 502


>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 466

 Score =  587 bits (1515), Expect = e-166,   Method: Composition-based stats.
 Identities = 192/484 (39%), Positives = 268/484 (55%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR      
Sbjct: 2   LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRASGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKII+RA +       N+ I+ +T +      +D+ +L  L P  +P+
Sbjct: 61  -VTYVRNVTDIDDKIIKRANEN------NETIAQLTQRFIDAMDEDSAKLGVLRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M+ +I  +I  G AY A N ++ +  SS   YG  S + +++ + G RV    
Sbjct: 114 ATEFVDGMLSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP WESPWG+GRPGWHIECSAMSSH+LG+ FDIHGGG DL FP
Sbjct: 174 FKKDPMDFVLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           HHENEIAQS  A   +    +  N W+HNGF+ ++  KMSKS GNF TI  +LE      
Sbjct: 234 HHENEIAQSEAAHSHDGKPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLE------ 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
             + A VIR  +L  HYR P++++ Q L +A++ L++         + D A         
Sbjct: 288 -QYDAEVIRFFILRAHYRSPLNYSDQHLNDAKLALTRLYTALRGVDVSDDAIDWQHPYAA 346

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCK--EHLNK-- 403
               A+ +D NT  A+  L  LA E  K    +   +    A +LG+   K  E L    
Sbjct: 347 RFKLAMDDDFNTPEAMAVLFDLANEVNKTKSTEAAGLLKGLASVLGLLSRKSDEFLQAKT 406

Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                       + ++ ++ +RL   + K F+ AD IRK+L   G ILED        + 
Sbjct: 407 NANGAANDGAAELDVDAMIVKRLEAKQAKNFAEADRIRKELAEAGIILEDT------PQG 460

Query: 455 TRWK 458
           T W+
Sbjct: 461 TTWR 464


>gi|254234889|ref|ZP_04928212.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126166820|gb|EAZ52331.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 460

 Score =  587 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 256/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++                       +A+
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D NT  A   L +LARE  +  +        L       A +LG+   +         
Sbjct: 346 DDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR +L + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEALIQARLEARAAKNWAESDRIRDRLTAMGVVLEDGK------GGTTWR 457


>gi|295401941|ref|ZP_06811904.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109240|ref|YP_003987556.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294976071|gb|EFG51686.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214341|gb|ADP72945.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 466

 Score =  587 bits (1515), Expect = e-165,   Method: Composition-based stats.
 Identities = 180/489 (36%), Positives = 259/489 (52%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   
Sbjct: 2   SSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV N TD+DDK+I+ AR+      + + +  +  +  Q + +D T L C      
Sbjct: 62  E--VKYVSNFTDVDDKLIKAARE------LGEDVPTVAERFIQAYFEDITALGCKKADVH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE + ++ + T     YG  S + IDE K G R+   
Sbjct: 114 PRVTENMDTIIEFIQALVEKGYAYEVDGDVYYRTRKFAEYGKLSHQSIDELKAGARIEIG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 174 EKKEDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG+LN+   KMSKS GNF+ +++++       R  
Sbjct: 234 PHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RQI 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIID---- 348
              V+R  ML  HYR PI+++ + L  A+  L +            Q+ST+    D    
Sbjct: 286 DPQVLRFFMLSVHYRHPINYSEELLENAKKGLERLKTAYFNLKHRLQSSTNLTDDDEQWL 345

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A +  + +D NT + I  L +LA+++              H  L        
Sbjct: 346 ARIQEQHEAFIREMDDDFNTANGIAVLFELAKQANLYLHEKNTSERVIHAFLRELEQLLD 405

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI + +E L          L+Q+R    K + F+ AD IR +L +K  ILED      
Sbjct: 406 VLGITLQEEELLDEEIE---ALIQKRNEARKNRNFALADQIRDELRAKNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 467

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 177/490 (36%), Positives = 259/490 (52%), Gaps = 57/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   
Sbjct: 1   MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII R+ +E        +   + +K  +++  D   L     T  
Sbjct: 61  D--VTYVQNFTDVDDKIINRSHEE------GISPEEVAAKYIKEYFVDCDGLGIKRATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+   
Sbjct: 113 PQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL F
Sbjct: 173 DQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  +  W+HNG++N+   KMSKS GNF T+ ++        + +
Sbjct: 233 PHHENEIAQSEARSG-KIFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
              ++R  ML  HYR P++F+ + L +A+  L +   T                      
Sbjct: 285 DLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVE 344

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASA 389
                       + A+ +D+NT  A+  + +LA+    N D           L  FN   
Sbjct: 345 LVKELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELT 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +L I   K+  +  +   IE+L+Q+R    K K+F  AD IR+QL   G +LED +   
Sbjct: 405 GVLNIVNKKK--DTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR--- 459

Query: 450 NGQRMTRWKQ 459
              +  +WK+
Sbjct: 460 ---QGVKWKR 466


>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
          Length = 465

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 177/488 (36%), Positives = 259/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF  ++   ++MYVCGPTVY++ HIGNARP I+FD L R L Y   + 
Sbjct: 1   MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII R+ +E        +   + +K  +++  D   L     T  P+
Sbjct: 60  -VTYVQNFTDVDDKIINRSHEE------GISPEEVAAKYIKEYFVDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  I+ +   G+AY  N ++ FDT+    YG  S +K ++ + G R+     
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG+  DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  +  W+HNG++N+   KMSKS GNF T+ ++        + +  
Sbjct: 233 HENEIAQSEARSG-KIFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------------- 342
            ++R  ML  HYR P++F+ + L +A+  L +   T                        
Sbjct: 285 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 344

Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     + A+ +D+NT  A+  + +LA+    N D           L  FN    +
Sbjct: 345 KELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I   K+  +  +   IE+L+Q+R    K K+F  AD IR+QL   G +LED +     
Sbjct: 405 LNIVNKKK--DTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR----- 457

Query: 452 QRMTRWKQ 459
            +  +WK+
Sbjct: 458 -QGVKWKR 464


>gi|330975115|gb|EGH75181.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 460

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 261/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 TEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457


>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 469

 Score =  587 bits (1514), Expect = e-165,   Method: Composition-based stats.
 Identities = 190/488 (38%), Positives = 270/488 (55%), Gaps = 54/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR      
Sbjct: 2   LKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRSSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I  +T +  +   +D+ +L  + P  +P+
Sbjct: 60  AVTYVRNITDIDDKIIKRANEN------GETIGQLTQRFIEAMDEDSAKLGIIRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I  +I  G AY A N ++ +  ++   YG  S + +++ + G RV    
Sbjct: 114 ATEFIDGMIQMISALIEKGFAYVAANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVDT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWG-----RGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           HKK+P DF+LWK   P EP W+SP+G     +GRPGWHIECSAMSSH+LG+ FDIHGGG 
Sbjct: 174 HKKDPMDFVLWKSVKPNEPSWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           DL FPHHENEIAQS  A        +  N W+HNGF+ ++  KMSKS GNF TI  +LE 
Sbjct: 234 DLQFPHHENEIAQSEAAHSHNGEPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLE- 292

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
                  + A V+R  +L  HYR P++++ Q L +A++ L++   +     + D A    
Sbjct: 293 ------KYDAEVVRFFILRAHYRSPLNYSDQHLDDAKLALTRLYTSLRGHVVADVAIDWQ 346

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGI-------- 394
                    A+ +D NT  A+  L  LA E  K    ++  +  + A +LG+        
Sbjct: 347 QPHSARFKEAMDDDFNTPEAMAVLFDLANEVNKTKSLEVAALLKSLAGVLGLLQRDADAF 406

Query: 395 ---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
              +V  +     + I I++LV +R    K K F+ AD IRK+L   G +LED       
Sbjct: 407 LQGDVAAQLAGTELKIDIDQLVIQRNEAKKTKNFAEADRIRKELADAGIVLEDT------ 460

Query: 452 QRMTRWKQ 459
              T W++
Sbjct: 461 ALGTTWRK 468


>gi|326391118|ref|ZP_08212664.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325992817|gb|EGD51263.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 466

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 255/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   E + ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y   + 
Sbjct: 1   MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIDEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSETAY-EQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----------- 353
            V+RL MLM HYR PI+F++  + +A     +      +   +                 
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQANSAYERLLNAVANLKHLANVCKDGGLNEEEKKLM 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ S  N            +L +F   + +
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTSNANLSRNSSKKLVEYILDMFLKLSEV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   +    +     I  L++ER    K K +  AD IR +L  KG ILED       
Sbjct: 405 LGLSY-RGVETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDT------ 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 PEGVRWKR 465


>gi|292898782|ref|YP_003538151.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198630|emb|CBJ45738.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
          Length = 462

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 188/483 (38%), Positives = 253/483 (52%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T +   +  KD   L  L P  +PR
Sbjct: 61  -LNYVRNITDIDDKIIKRAHEN------GESIEQLTQRMIGEMHKDFAALNILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I   HAY A N +++F   S   YGS SR+ +D+ + G RV    
Sbjct: 114 ATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVTA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A       N W+H+G + ++  KMSKS  NF T+ ++LE        +
Sbjct: 234 PHHENEIAQSTSAHDG-PYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE-------HY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLS 353
            A  +R  ++  HYR  +++    L +A   L +            T       +    +
Sbjct: 286 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARFRA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH----- 400
           A+ +D NT  A  AL  LARE  +           L         +LG+           
Sbjct: 346 AMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQS 405

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
              +N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   TRW
Sbjct: 406 GANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTRW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|304315919|ref|YP_003851064.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777421|gb|ADL67980.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 464

 Score =  587 bits (1513), Expect = e-165,   Method: Composition-based stats.
 Identities = 190/488 (38%), Positives = 264/488 (54%), Gaps = 58/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  ++ + + MYVCGPTVY+F HIGNAR  IVFD + R L Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPLNDNIVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I+R+ +E      N  +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VNYVQNFTDIDDKLIKRSHEE------NTTVKELADRYIEEYFKDADSLGIKRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I  ++ +I  G AY  N ++ +DT+    YG  S + IDE K G R+     
Sbjct: 113 ATENIDDIINFVKKLIDKGFAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARIEVNED 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK +   EP W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  E  A  W+H G+LN+   KMSKS  NF T+ ++          +  
Sbjct: 233 HENEIAQSEAANDAE-FARFWMHIGYLNINNEKMSKSKNNFFTVRDITS-------QYDP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPA------------- 350
            V+R  ML +HYR PI+F+   L +++    +   T  + + ++D A             
Sbjct: 285 EVLRFFMLTSHYRNPINFSHDLLEQSKSGFLRLSNTVDNLRHLLDDALDRELSDEEKAYK 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++ R+   N D          +L IF   + +
Sbjct: 345 EKYDEYKRRFEEAMDDDFNTADAISVLFEMVRDINTNIDGNSPKELIEYILDIFLKLSSV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   K  L   +   I+KL+++R    K K ++ AD IR +L+ +G  LED       
Sbjct: 405 LGISYKKRDL---LDDEIKKLIEKREEARKAKNWAEADKIRDELKKQGIALEDT------ 455

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 456 PSGVRWKR 463


>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 462

 Score =  586 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 187/480 (38%), Positives = 267/480 (55%), Gaps = 45/480 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++IYN+L R    F  I+P  +RMYVCG T+YD+ HIG+AR M+ FDV+YR L+    E
Sbjct: 3   SLQIYNSLTRSKQVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKALGYE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKII RA +        ++IS +T++ TQ   +DT+ L  L P H+P
Sbjct: 63  --VTYVRNITDIDDKIINRAGEN------GESISSLTARFTQYMHEDTSALGILPPDHEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT ++P+M+ LI  +  +G AY++ + ++ +       YG  S + +D+ + G RV   
Sbjct: 115 RATEYVPEMLELIAKLEKNGLAYQSEDGDVNYSVRDFRGYGKLSGKSLDDLRAGERVDVN 174

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF+LWK + P EP    W S WG GRPGWHIECSAMSS  LG  FDIHGGG D
Sbjct: 175 TGKRDPLDFVLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGAD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++L       
Sbjct: 235 LQFPHHENEIAQSEGASG-HPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVL------- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------- 349
           +++ A V+R  ++ +HYR P++++   L +A   L++         + D           
Sbjct: 287 KNYDAEVLRFFIIRSHYRSPLNYSDAHLDDARSALTRLYTALKDIDVQDKPVDWQEEHAV 346

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEH------- 400
               A+ +D NT  A+  L +LA E  + H  ++     A   +LG+             
Sbjct: 347 RFSRAMNDDFNTPEAVAVLFELANEVNRTHSVEVASQLKALGSVLGLLERDPRQFLQGNG 406

Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +++N    IE  +Q R    K + F+ AD IR +L  KG +LED          T W++
Sbjct: 407 TVDENEEKWIEAQIQARREAKKTRDFAKADKIRNELLEKGIVLEDKPGGK-----TEWRR 461


>gi|39935066|ref|NP_947342.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|61216212|sp|Q6N8A7|SYC_RHOPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39648917|emb|CAE27438.1| cysteine-tRNA ligase [Rhodopseudomonas palustris CGA009]
          Length = 463

 Score =  586 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 225/467 (48%), Positives = 297/467 (63%), Gaps = 18/467 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL R    F  IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MELRLYDTLTRDKRPFTPIDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +
Sbjct: 61  EAHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
           PRAT HI +M  +I+ ++  G AY   + ++F  S++       P YGS + R +DE   
Sbjct: 121 PRATEHIGEMRSIIEKLVAGGFAYVEQDHVLFSPSAMNAANGVLPRYGSLANRSLDEMIA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
           G RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHENE+AQSCCA   E+ A  W+HNGFL +EG KMSKS GNFITI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTERMAQTWMHNGFLQVEGEKMSKSLGNFITIRELL 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPAV 351
            T KFGGRSW    +RLAML THYR+PID+TV  L EAE  +  W   +     +    V
Sbjct: 301 ATNKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALHEAEKAILDWSDFAKDATPVRCDEV 360

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++AL +DLNT   I  LH L R              +  +LGI         ++    + 
Sbjct: 361 IAALTDDLNTPKMIAELHALRRAG-----KADELRGAMQLLGINPVV-RAPVDLDATAKS 414

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           L++ R      K +  +D IR +L + G +L+D K+ D G+ +T W+
Sbjct: 415 LIEARTAARANKDWKESDRIRDELAAMGVVLKDGKDAD-GKSVTTWE 460


>gi|152989578|ref|YP_001348862.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|187629850|sp|A6V727|SYC_PSEA7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150964736|gb|ABR86761.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 460

 Score =  586 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 182/478 (38%), Positives = 256/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGRFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++                       +A+
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEHVERFAAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D NT  A   L +LARE  +  D        L       A +LG+   +         
Sbjct: 346 DDDFNTAGACSVLFELAREVNRLRDSDLPAAAALAARLKQLAGLLGVLQLEPEAFLQAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|290476082|ref|YP_003468980.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289175413|emb|CBJ82216.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 460

 Score =  586 bits (1512), Expect = e-165,   Method: Composition-based stats.
 Identities = 180/481 (37%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA         N++   +T++   +   D   L    P  +PR
Sbjct: 61  -LTYVRNVTDVDDKIIKRA------TENNESCDALTTRMLSEMHSDFDALNIQRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I + + +I  GHAY A+  +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATQHISEIIQITEELINRGHAYVADNGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEIAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWESPWGVGRPGWHIECSAMNGKQLGQHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHGG-PYVNYWMHSGMVMVDKEKMSKSLSNFFTIRDVLG-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +              T     +     A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSAQPTGSEAFEARFTEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A   L  +ARE            + L       A ILG+      +  +  
Sbjct: 346 MNDDFNTPEAYSVLFDIAREINCLKTENLAAANGLAAELRKLAGILGLLEQEPEQFLQGG 405

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +  +A IE L+++R      K+++ AD  R QL +    LED      G + T W++
Sbjct: 406 AHVDDDVAQIEALIKQRNDARTNKEWALADAARDQLNAMRIELED------GPQGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
          Length = 463

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 196/486 (40%), Positives = 260/486 (53%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL R+  EF  I+   + +YVCGPTVYD+ HIGNARPMIVFD L R L Y   + 
Sbjct: 1   MKILNTLTRRKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E          S+I+ +   +  KD   L     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANEE------GVDASVISERYIAEVKKDMAALNVREATTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  IP MI +++ +I  G+AYE N  + F T    +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIPDMIEMVKTLIEKGYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W SPWG GRPGWH+ECS MS  Y+G V DIH GG DL+
Sbjct: 173 VDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFL +   KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGTE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------KWPQTSTSKGIIDPAVL-- 352
           +P  VIR  ML  HYR P++F+   +  ++  L        +    S ++G +D AV   
Sbjct: 285 YPLQVIRFFMLSAHYRSPLNFSADLVEASKNGLERILTAVDRLKSISGTEGEVDKAVADE 344

Query: 353 ---------SALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILG 393
                    +A+ +DLNT  AI  + +L + +  N            +L        ILG
Sbjct: 345 MDAFVKKYEAAMDDDLNTADAISVIFELVKYANVNVTEESTKATVELVLNTVTKLCDILG 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           I    E   + +   IE L++ER    K K F+ AD IR QL   G ILED +       
Sbjct: 405 I--ITEKKKEILDSDIEALIEERQAARKAKNFARADEIRDQLSDMGIILEDTR------E 456

Query: 454 MTRWKQ 459
             +WK+
Sbjct: 457 GVKWKR 462


>gi|13476470|ref|NP_108040.1| cysteinyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|21264021|sp|Q984X8|SYC_RHILO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|14027231|dbj|BAB54185.1| cysteine-tRNA ligase [Mesorhizobium loti MAFF303099]
          Length = 477

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 256/475 (53%), Positives = 329/475 (69%), Gaps = 19/475 (4%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + +++YNTL R  T+F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5   SQGLRLYNTLTRAKTDFVPIDALNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLY 64

Query: 62  GEKCVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           G+  VTYVRNITD+DDKI  RA            + +N+AI  +T K   QF +D   L 
Sbjct: 65  GQAHVTYVRNITDVDDKINARALRDFGSEISAGKLSLNEAIRRVTEKTADQFHRDVATLG 124

Query: 116 CLAPTHQPRATNHIP-------QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
           CL PT +PRAT  +         MI LIQ++I  GHAY A  E++FDT+S+P+YG  S+R
Sbjct: 125 CLEPTVEPRATEFVEPRADGKADMITLIQSLIKRGHAYAAAGEVLFDTASMPDYGQLSKR 184

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            +DEQ+ G RV    HKKNP DF+LWK S+P EPGW+SPWGRGRPGWHIECSAMS+ YLG
Sbjct: 185 NLDEQQAGARVAVDAHKKNPGDFVLWKLSSPEEPGWQSPWGRGRPGWHIECSAMSAAYLG 244

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           +VFDIHGGGLDLIFPHHENEIAQS CA      AN+W+HNGFL +EG+KMSKS GNF +I
Sbjct: 245 EVFDIHGGGLDLIFPHHENEIAQSRCAHGTSVMANVWMHNGFLQVEGQKMSKSLGNFYSI 304

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKG 345
           +ELLET+ FGGRSWP  V+RLAMLMTHYREPIDF+V++L EAE  L KW + +    + G
Sbjct: 305 HELLETETFGGRSWPGEVLRLAMLMTHYREPIDFSVRKLEEAENTLRKWKRAADLAPAAG 364

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
            +   V+ AL +DL T +A Q L +LA E+   ++      AS   LG +V    ++++ 
Sbjct: 365 QLPVEVIDALSDDLATYAAFQVLTQLAGEAADGNEAAAALKASLLFLGFDVASADIDEDG 424

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              + K +  RL L+  K ++ AD IR +L ++G  L+D K+P  G+R+T W+ K
Sbjct: 425 ---VAKAIANRLALIAAKNWTEADRIRDELLAQGVQLKDGKDPVTGERITTWEVK 476


>gi|116049743|ref|YP_791450.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296389817|ref|ZP_06879292.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|122258854|sp|Q02KT6|SYC_PSEAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115584964|gb|ABJ10979.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 460

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 257/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +       ++   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------DEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++                       +A+
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D NT  A   L +LARE  +  +        L       A +LG+   +         
Sbjct: 346 DDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457


>gi|107101226|ref|ZP_01365144.1| hypothetical protein PaerPA_01002258 [Pseudomonas aeruginosa PACS2]
          Length = 460

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 256/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +    F  +  + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+   + 
Sbjct: 2   LQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +   ++T +      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GEPFDVLTERMIAAMHEDEARLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SRR++++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQILIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 174 AKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  A  W+H G + + G KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             V+R  ++ +HYR PI+++ + L EA+  L ++                       +A+
Sbjct: 286 PEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D NT  A   L +LARE  +  +        L       A +LG+   +         
Sbjct: 346 DDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR +L + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEALIQARLEARAAKNWAESDRIRDRLTAMGVVLEDGK------GGTTWR 457


>gi|56961911|ref|YP_173633.1| cysteinyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|61216140|sp|Q5WLT3|SYC_BACSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56908145|dbj|BAD62672.1| cysteinyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 466

 Score =  586 bits (1511), Expect = e-165,   Method: Composition-based stats.
 Identities = 170/486 (34%), Positives = 249/486 (51%), Gaps = 54/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+L  K   F  I+   ++MY CGPTVY++ HIGNARP IV+D++ R L Y   + 
Sbjct: 2   IKLFNSLTNKKEPFVPIEEGKVKMYCCGPTVYNYIHIGNARPPIVYDMVRRYLTYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V N TD+DDKII  A +      + + ++ +  +  + +  DT  L        PR
Sbjct: 61  -VTFVSNFTDVDDKIIRAANE------LGEEVAAVAERFIKAYYADTCALNVKEADLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I ++   G AYEA  ++ F T     YG  S + +D+ + G R+     
Sbjct: 114 VTETMDDIIAFIADLEKKGFAYEAGGDVYFRTRKFNGYGKLSGQALDDLQSGARIEVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P E  W SPWG GRPGWHIECSAM    LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFVLWKAAKPNEISWSSPWGEGRPGWHIECSAMIKKSLGDTIDIHAGGKDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +K AN W+HNGF+N+   KMSKS GNF+  ++++       + +  
Sbjct: 234 HENEIAQSEALTG-KKLANYWMHNGFVNINNEKMSKSLGNFVLAHDII-------QQYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
            V+R  ML  HYR PI+F+ + L  AE  L +   T  +                     
Sbjct: 286 EVVRFFMLTAHYRTPINFSDELLKGAEAGLERLKNTVANLQHRLAETADMGAEEEWLEKI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                  +  + +D N+ +AI  L  LA+E+              +  L +F     +LG
Sbjct: 346 AGAKQRFIEEMDDDFNSANAISVLFDLAKEANIYMSEAQTSKKVLNAFLELFAEFGEVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +   ++   + +   IE L++ER +  K + F+ AD IR  L+ K  +LED        +
Sbjct: 406 VSFTQQE-EELLDAEIEALIEERNVARKERNFARADEIRDLLKEKNIVLEDT------PQ 458

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 459 GVRWKR 464


>gi|296447282|ref|ZP_06889211.1| cysteinyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296255244|gb|EFH02342.1| cysteinyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 485

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 234/488 (47%), Positives = 301/488 (61%), Gaps = 43/488 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF+ IDP+N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR  YG +
Sbjct: 8   LKLYNTLTRVKEEFRPIDPANVRMYVCGPTVYDYAHIGNARPLIVFDVLFRLLRQLYGAE 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA +         +I  +T      F  D   L CL P+ QPR
Sbjct: 68  HVTYVRNITDVDDKINARAAER------GISIRELTEGTNAIFQADVAALGCLPPSVQPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI L++ +I  GHAY A+  ++FD  S+ +YG  SRR +DE   G RV    +
Sbjct: 122 ATEHIAQMIALVEKLIASGHAYAADGHVLFDVPSMADYGRLSRRPLDEMIAGARVDVAPY 181

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+   DF+LWK S   EPGW+SPWGRGRPGWH+ECSAMS  +LG+ FDIHGGG+DL+FPH
Sbjct: 182 KRGDMDFVLWKPSKDSEPGWDSPWGRGRPGWHLECSAMSWKHLGETFDIHGGGIDLVFPH 241

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA   E  AN W+HNGFL +EG KMSKS GNF+TI+ELL T+ FGGR WP 
Sbjct: 242 HENEIAQTRCAFGHEVMANYWMHNGFLQVEGEKMSKSLGNFVTIHELLHTENFGGRKWPG 301

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVLSA 354
            V+RLAML THYR+PIDFTV+ L EAE  L +W +               G +  A +  
Sbjct: 302 EVLRLAMLRTHYRQPIDFTVKALEEAERTLLRWRRFVELALSLDDDISDFGPLPSAFMEY 361

Query: 355 LYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNASAH-----------IL 392
           L +DLNT +A+  +H+LAR           EST    +     A+             IL
Sbjct: 362 LADDLNTPAALSRIHELARVGPTAALEWGEESTAASPVEQQIAAARLRAALSLLGLQTIL 421

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                +  +++  S  I++L++ R      K ++ +D IR  L + G  L+D K+     
Sbjct: 422 DPAWQRSSVDEAESDKIKELIERRRTARATKNWAESDRIRDALAAMGVALKDNKDGT--- 478

Query: 453 RMTRWKQK 460
             T W+ K
Sbjct: 479 --TTWEVK 484


>gi|317497616|ref|ZP_07955934.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895175|gb|EFV17339.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 467

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 194/484 (40%), Positives = 258/484 (53%), Gaps = 53/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  + P  + MYVCGPTVY++ HIGNARPMI+FD + R   Y   E 
Sbjct: 1   MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E          + I  +  ++  +D   L     THQPR
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE------GVTATEIAERYIKECKQDMEALNIKPATHQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  GHAYE +  + F T S  +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  KK+P DF+LWK     E  W+SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKKDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  EK AN W+HNGFLN+  +KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEACNG-EKFANYWMHNGFLNINNKKMSKSAGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------------- 341
           +P  VIR  ML  HYR P++F+   +  A+  L +                         
Sbjct: 285 YPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCREMAAKEETGSLSKEET 344

Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASA 389
               +  ++      A+ +D NT  A+ A+ ++ RES              +L +     
Sbjct: 345 EHFANIEVLVKKFEDAMEDDFNTADAVSAIFEIVRESNSTVKDFSADYAKKILKVLEDLC 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LGIE  KE    +  I   KL++ER    K K F+ AD IR QL  +G +L+D +   
Sbjct: 405 SVLGIETTKEEEILDEEIE--KLIEERQAARKNKDFARADEIRDQLLEQGIVLKDTREGV 462

Query: 450 NGQR 453
              R
Sbjct: 463 KWSR 466


>gi|78221284|ref|YP_383031.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|109894903|sp|Q39ZL8|SYC_GEOMG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 485

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 199/507 (39%), Positives = 258/507 (50%), Gaps = 71/507 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL     EF  + P  + MYVCG TVYD  HIG+AR  +VFD++YR LR+   
Sbjct: 1   MSLRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN TD+DDKII RA QE            I+ +   +F +D   L    PTHQ
Sbjct: 61  D--VTYVRNYTDVDDKIINRANQEGVPYN------AISERFIAEFDRDMAALGLDLPTHQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI +MI +I  +I  G AY A+ ++ F       Y   S+R +DE + G R+   
Sbjct: 113 PKATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP WESPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+F
Sbjct: 173 EKKRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A+  +  A+ WIHNGF+N+   KMSKS GNF TI E+LE        +
Sbjct: 233 PHHENEIAQSEAANG-KPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLE-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
            A V+R  +L  HYR PIDF+ Q L EAE  L +   T                      
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLREAEAGLERIYGTLAGIDENLTKGAEGTAEETDRE 344

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPI----F 385
                         A+ +D NT  A+  +  L R + +          N  LL       
Sbjct: 345 LAEKAVTFPERFREAMDDDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRALLAEARDRI 404

Query: 386 NASAHILGIEVCKEHLNKN------------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LGI   +                   +  IE+L+ ER+     + F  AD IR 
Sbjct: 405 RKVGAVLGIFTSEPRAFAERLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRD 464

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
            L +KG +L D        + T WK K
Sbjct: 465 SLAAKGIMLLDS------PQGTTWKVK 485


>gi|313499077|gb|ADR60443.1| CysS [Pseudomonas putida BIRD-1]
          Length = 460

 Score =  586 bits (1510), Expect = e-165,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 253/478 (52%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++           +            A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D  T  A   L  L RE  +  D        L         +LG+   +         
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GTTTWR 457


>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 483

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 184/498 (36%), Positives = 255/498 (51%), Gaps = 62/498 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +K+YNTL ++  EF+ +    ++MYVCGPTVYD+ H+G+AR  I FDV+ R L +  
Sbjct: 5   KNMLKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKG 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V  V N TDIDDKII+RAR+        +    +  +  + F++D   L       
Sbjct: 65  Y--TVLMVMNFTDIDDKIIKRARE------TGEDPKELAERFIKIFLEDMEALKVKPADI 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PR T+HI  +I  I  +   G+AYE ++ I F+    P YG  S  KI++ + G RV  
Sbjct: 117 YPRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEP 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLI
Sbjct: 177 GEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLI 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS      E     W+H GF+ ++G KMSKS GNF+TI ELL       + 
Sbjct: 237 FPHHENEIAQSEACFGHE-WVKYWLHTGFVMVKGEKMSKSLGNFVTIRELL-------KR 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
           +   VIR  +L  HYR P+++T + L  A+  L +   T  +  +               
Sbjct: 289 YEPEVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELE 348

Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIF 385
                           A+ +D NT  A++A+ ++A    K                L  F
Sbjct: 349 FKTYEIIREGKRKFYEAMDDDFNTAEALKAVFEVANAINKYLTEANKPKESILRKALEFF 408

Query: 386 NASAHILGIE----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              + + G+       +    +     IE LV+ R  L K K++  AD IR++L+  G  
Sbjct: 409 KIVSEVFGVFEDYFREETKEREESEKLIELLVEVRKQLRKEKRYELADMIREELKKLGIQ 468

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           LED  +       T WK+
Sbjct: 469 LEDRGS------ETTWKR 480


>gi|148548000|ref|YP_001268102.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
 gi|187629852|sp|A5W458|SYC_PSEP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148512058|gb|ABQ78918.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 460

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 252/478 (52%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTRCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++           +            A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D  T  A   L  L RE  +  D        L         +LG+   +         
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDPEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GTTTWR 457


>gi|289579166|ref|YP_003477793.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528879|gb|ADD03231.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 466

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 187/488 (38%), Positives = 254/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EFQ ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y   + 
Sbjct: 1   MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKELAEKYIHEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I  G+AY  N  + F+T+    YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKGYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWGRGRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSEALYG-QQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----------- 353
            V+RL ML+ HYR PI+F++  + +A     +      +   +                 
Sbjct: 285 EVLRLFMLIAHYRNPINFSLDLMDQANSAYERLLNAVANLKHLFTVCKERELNEEEKRIV 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ +  N            +L +F   + I
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTANINLSGNSSKELVKYILDMFLKLSEI 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   +          I  L+++R    K K +  AD IR +L  KG ILED       
Sbjct: 405 LGL-FYRSVKTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKGIILEDT------ 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 PEGVRWKR 465


>gi|167765721|ref|ZP_02437774.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
 gi|167712594|gb|EDS23173.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
 gi|291559857|emb|CBL38657.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
          Length = 467

 Score =  585 bits (1509), Expect = e-165,   Method: Composition-based stats.
 Identities = 193/484 (39%), Positives = 258/484 (53%), Gaps = 53/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  + P  + MYVCGPTVY++ HIGNARPMI+FD + R   Y   E 
Sbjct: 1   MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E          + I  +  ++  +D   L     THQPR
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE------GVTATEIAERYIKECKQDMEALNIKPATHQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  GHAYE +  + F T S  +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     E  W+SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKEDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  EK AN W+HNGFLN+  +KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEACNG-EKFANYWMHNGFLNINNKKMSKSAGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------------- 341
           +P  VIR  ML  HYR P++F+   +  A+  L +                         
Sbjct: 285 YPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCREMSAKEETGSLSKEET 344

Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASA 389
               +  ++      A+ +D NT  A+ A+ ++ RES              +L +     
Sbjct: 345 EHFANIEVLVKKFEDAMEDDFNTADAVSAIFEIVRESNSTVKDFSADYAKKILKVLEDLC 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LGIE  KE    +  I   KL++ER    K K F+ AD IR QL  +G +L+D +   
Sbjct: 405 SVLGIETTKEEEILDEEIE--KLIEERQAARKNKDFARADEIRDQLLEQGIVLKDTREGV 462

Query: 450 NGQR 453
              R
Sbjct: 463 KWSR 466


>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254765173|sp|B9MMM6|SYC_ANATD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 465

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 182/480 (37%), Positives = 251/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E         +  +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKE------GITVFELAERFIQEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTSTS 343
             +RL ML  HYR+P++F++  + +AE+ L +                       +   +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
              +    + A+ +DLNT  A   L ++ RE     +                   ILGI
Sbjct: 345 IEELKAKFIDAMEDDLNTAEATGYLFEMVREINTYANSCSKETLTFAKDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   + I   I +LV++R    K K F+ AD IR +L+S G+I+ D       +R+
Sbjct: 405 LEQYSAKEEAIPQQILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIERI 464


>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122314719|sp|Q0AJJ4|SYC_NITEC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 467

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 185/488 (37%), Positives = 266/488 (54%), Gaps = 54/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL R   EF  + P  ++MYVCG TVYD  H+G+AR ++VFD + R L+    E 
Sbjct: 2   LKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQTLDYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA + H      +    +T++  Q   +D   L  ++P+ +PR
Sbjct: 61  -VTYVRNITDIDDKIIRRALENH------EPFGALTARYIQAMEEDAAALGIISPSFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  M+ +I++++  G AY AN  ++ +D    P YG  S + +D+ + G RV    
Sbjct: 114 ATECIESMVTMIESLLSKGLAYVANNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAMS HYLG+ FDIHGGG DL FP
Sbjct: 174 NKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS          N W+HNGF+ ++  KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSEGVHG-HPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLAR-------YQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------K 344
             V+R  ++  HYR P++++   L +A   L +      +                    
Sbjct: 286 PEVVRFFIVRAHYRSPLNYSDAHLNDARNALERLYTALKNHAPSQAQAAEEATATIDWVN 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCK---- 398
                  ++A+ +D NT  A+  L  LA E+ +  N     +  A   ILG+        
Sbjct: 346 DGYAQRFMAAMNDDFNTPEAVAVLFDLASEANRTGNSHYASLLKALGGILGLLQQSPRQY 405

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    + +    IE+++Q+RL   K K F+ AD +R+QL   G ILED      G 
Sbjct: 406 LQHPAHPQNDHHSIEEIERMIQQRLQARKEKNFAQADALRQQLAEAGIILED------GP 459

Query: 453 RMTRWKQK 460
           + T W+++
Sbjct: 460 QGTTWRRQ 467


>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68735029|sp|Q5JD45|SYC_PYRKO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 476

 Score =  585 bits (1508), Expect = e-165,   Method: Composition-based stats.
 Identities = 185/495 (37%), Positives = 250/495 (50%), Gaps = 60/495 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKIYNTL R+  EF+ +    +RMYVCGPTVYD+ HIG+AR  I FDV+ R L +   
Sbjct: 1   MGIKIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVIRRYLEHKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TDIDDKII+RA +        +    +  K  + F++D   L        
Sbjct: 61  --TVLMVMNFTDIDDKIIKRANE------TGEDPKELAEKFLKYFLEDMKALKVKPADIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HI  +I  I+ +   G+AYE ++ + F+     +YG  S+ K+++   G RV   
Sbjct: 113 PRVTEHIQDIIDFIRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGSDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      E     W+H GFL + G KMSKS GNF+TI E LE        +
Sbjct: 233 PHHENEIAQTEACTGHE-WVRYWMHTGFLMVNGEKMSKSLGNFVTIREALER-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIRL +L  HYR P+D+T + L  A+  L +   T  +  +                
Sbjct: 285 DPEVIRLFVLQRHYRSPLDYTEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWGEEEF 344

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
                          A+ +D NT  A++A+ +++    +                   F 
Sbjct: 345 EAYEAIRDGRKKFYDAMDDDFNTAEALKAVFEVSNAINRYLTQVEKPKESILRKAWEFFK 404

Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + + GI  +  +E         I+ L+  R  L K +KF  AD IR +L + G  LED
Sbjct: 405 MVSEVFGIFEDYFREQKAGEEEALIKLLIDVRAQLRKERKFDLADKIRDELRNLGIQLED 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + T WK+
Sbjct: 465 T------PQGTVWKR 473


>gi|317126835|ref|YP_004093117.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315471783|gb|ADU28386.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 466

 Score =  584 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 179/489 (36%), Positives = 268/489 (54%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK+  FQ I+   + MYVCGPTVY++ HIGNARP +VFD++ R L+Y   
Sbjct: 1   MTIQVYNTLSRKVEPFQPIEEGKVSMYVCGPTVYNYIHIGNARPAVVFDMVRRYLQYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y+ N TD+DDKII+ A +      + + +  I  +  + + +DT  L        
Sbjct: 61  E--VQYISNFTDVDDKIIKAAEE------MGEDVPTIAERFIEAYFEDTAALGVQKADKH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  +P++I  I  +I  G+AYE+  ++ F T     YG  S + ID+ K+G+R+   
Sbjct: 113 PRVTETMPEIIDFIARLIEKGYAYESQGDVYFRTRKFDGYGKLSHQSIDDLKLGSRIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   E  W+SPWG GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 DKKEDPLDFVLWKSAKEGEIYWDSPWGNGRPGWHIECSAMVKKYLGDTIDIHAGGQDLSF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +  +K AN WIHNG++N++  KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSESLNG-KKMANYWIHNGYINIDNEKMSKSLGNFILVHDII-------KKY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              V+R  ++  HYR PI+F+ ++LT A+  L +   T                     +
Sbjct: 285 DPEVVRFFIVNAHYRSPINFSDEQLTSAKSGLERIKTTYLNVKHRLSETANLGEDVEKWT 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
              G+I    L A+ +D N+ +A+ A+  L +                   +   +  ++
Sbjct: 345 KDMGVIHTRFLEAMDDDFNSANAVAAMFDLIKLGNLYLREDHTNKRVLEYFIKQLDDMSY 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + K+   + +   IE L+QER+   K + F+ AD IR  L+ +  ILED      
Sbjct: 405 VLGLTLNKKE--EILDEEIEVLIQERIDARKNRNFARADEIRDLLKEQNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|259909186|ref|YP_002649542.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224964808|emb|CAX56330.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283479232|emb|CAY75148.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
          Length = 462

 Score =  584 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 189/483 (39%), Positives = 255/483 (52%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I   NI MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGNIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESIERLTNRMIDEMHKDFAALNILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I   HAY A N +++F   S P YGS SR+ +D+ + G RV    
Sbjct: 114 ATRHIAEIIELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   L + FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLSEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 PHHENEIAQSTCAHDG-PYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QHY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLS 353
            A  +R  ++  HYR  +++    L +A   L +            T       +     
Sbjct: 286 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARFRE 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
           A+ +D NT  A  AL  LARE  +           L         +LG+           
Sbjct: 346 AMDDDFNTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPQQFLQS 405

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
              +N      IE L+Q R+   K K ++ AD  R +L   G +LED      G   TRW
Sbjct: 406 GVNINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTRW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 465

 Score =  584 bits (1507), Expect = e-165,   Method: Composition-based stats.
 Identities = 182/480 (37%), Positives = 250/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E         +  +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKE------GITVFELAERFIQEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------------TSTS 343
             +RL ML  HYR+P++F++  + +AE+ L +                           +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDMLKAA 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
              +    + A+ +DLNT  A   L ++ RE     +                   ILGI
Sbjct: 345 IEDLKAKFIDAMEDDLNTAEATGYLFEMVREINTYANSCSKETLTFAKDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   + I   I +LV++R    K K F+ AD IR +L+S G+I+ D       +R+
Sbjct: 405 LEQYSEKEEAIPQEILELVKKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIERI 464


>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|171704442|sp|A1AK01|SYC_PELPD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 493

 Score =  584 bits (1506), Expect = e-165,   Method: Composition-based stats.
 Identities = 190/510 (37%), Positives = 255/510 (50%), Gaps = 79/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  +   F  + P    MYVCG TVYD+ HIG+AR  +VFDV+YR L Y     
Sbjct: 3   LRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TDIDDKII RA QE          + I+ +  + F +D  RL    PT +P+
Sbjct: 61  AVTYVRNFTDIDDKIINRANQE------GVDYTTISERYIEAFNQDMARLGLAKPTVEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+  +I +I+ +I  GHAYE++ ++ +   S P+Y   S R +++   G RV     
Sbjct: 115 ATDHMGGIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVDDR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK S P EP W+SPWG GRPGWHIECSAMS  YLGK FDIHGGG DL+FPH
Sbjct: 175 KRNPMDFALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+   +    W+HNGF+N+   KMSKS GNF TI E+LE        +  
Sbjct: 235 HENEIAQSEAANGC-QFVRYWMHNGFVNINSEKMSKSLGNFFTIREVLE-------QYDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
             +R  +L  HYR PIDF+ Q L +A+  L +      +                     
Sbjct: 287 ETLRFFILSAHYRSPIDFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPVEGAPLP 346

Query: 350 ---------------AVLSALYNDLNTVSAIQALHKLARESTK---------------NH 379
                              A+ +D NT  A+  L +  R + +                 
Sbjct: 347 PAGAELHEKLQSLISRFREAMDDDFNTAQALGVLFEAVRATNRFMAESGDQTPATLALLG 406

Query: 380 DLLPIFNASAHILGI---------EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSS 427
            +  +F  +  +LG+         E  K+  +  + I    IE+L+ ER      + F  
Sbjct: 407 QVRRLFAETGDVLGLFTSQPAAWLESIKQAKSDQMEISPQEIEQLIAERAAARTNRDFKR 466

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            D IR  L  KG  L D        + T W
Sbjct: 467 GDEIRDLLLQKGIQLLDS------PQGTTW 490


>gi|188534564|ref|YP_001908361.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|229558632|sp|B2VBD5|SYC_ERWT9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188029606|emb|CAO97484.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 462

 Score =  584 bits (1506), Expect = e-165,   Method: Composition-based stats.
 Identities = 189/483 (39%), Positives = 257/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R    FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA++        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRAQEN------GESIEQLTNRMIGEMHKDFAALNILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +++ L++ +I   HAY A N +++F   S P YGS SR+ +D+ + G RV    
Sbjct: 114 ATRHITEIVELVEKLIAREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVAA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EPGW SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+F
Sbjct: 174 DVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++LE        +
Sbjct: 234 PHHENEIAQSTCAHDG-PYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLE-------HY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLS 353
            A  +R  ++  HYR  +++    L +A   L +            T       +     
Sbjct: 286 DAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFETRFRE 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKE 399
           A+ +D NT  A  AL  LARE  +           L         +LG+      +  + 
Sbjct: 346 AMDDDFNTPEAYSALFDLAREVNRMKAEAPAAADGLAARLRVLGGVLGLLEQDPEQFLQS 405

Query: 400 HLNKNIS--IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
             N N      IE L+Q R+     K ++ AD  R +L   G +LED      G   TRW
Sbjct: 406 GANSNDEEVAQIEALIQMRIDARNEKNWAQADVARDRLNEMGIVLED------GAGGTRW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|255282796|ref|ZP_05347351.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255266570|gb|EET59775.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 469

 Score =  584 bits (1506), Expect = e-165,   Method: Composition-based stats.
 Identities = 186/492 (37%), Positives = 257/492 (52%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K  EF  + P  + MYVCGPTVY+F HIGNARPMIVFD + R + +   E 
Sbjct: 1   MKIYNTLSKKKEEFVPLVPGKVSMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEHKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A++E            I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAQEE------GVTADEISQRYIAECKKDMEGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +I  +I  G+AY A +  + F T     YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIDGMIEMISTLIEKGYAYPAADGTVYFRTRKFKEYGKLSHKNLDDLRGGNRSLLVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW +GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEQKEDPLDFVLWKPKKEGEPYWESPWCQGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS C +  +  A  W+HNGFLN++ RKMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSECCNG-KIFARYWMHNGFLNIDNRKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
            +   V+R  ML  HYR P++F+ + +  A   L++                        
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEAAGNGLNRIVNAVENLKFLAGNASQETLTEPE 344

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
            +T  +    +     A+ +D NT  AI A+ +L + +  N            +      
Sbjct: 345 AETQKALAEYEKKFDDAMDDDFNTADAISAIFELVKFANTNVTEDSSKALAEAVKDKIVE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + ILG+ V K+   + +   IE L++ER    K K F+ AD IR  L  KG IL+D + 
Sbjct: 405 LSDILGLIVEKKE--EMLDAEIEALIEERQAARKAKNFARADEIRDILLGKGIILKDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 465

 Score =  584 bits (1506), Expect = e-165,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 255/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +   EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E         +  +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKE------GITVFELAKRFIEEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++++   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVSINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTSTS 343
             +RL ML  HYR+P++F++  + +AE+ L +                       +   +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
              +    + A+ +DLNT  A   L ++ RE   + +         +         ILGI
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANSCSKETLTFVKDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   + I   I +LV++R    K K F+ AD IR +L+S G+I+ D       +R+
Sbjct: 405 LEQYGAKEEAIPQEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIERI 464


>gi|88860441|ref|ZP_01135079.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817639|gb|EAR27456.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 459

 Score =  584 bits (1506), Expect = e-165,   Method: Composition-based stats.
 Identities = 175/479 (36%), Positives = 259/479 (54%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  +F+ +    I MYVCG T+YD+ H+G+AR  + FDV+ R  R+   + 
Sbjct: 2   VQIYNTLTRQKEQFKPMVAGKISMYVCGITIYDYCHVGHARTYVSFDVMNRYFRHLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII+RA +       N+ I+ +T + T+   +D   L  L    +P 
Sbjct: 61  -VTYVRNITDVDDKIIKRAHEN------NEEINDLTVRMTKAMHEDFNALNMLPADIEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP++I +++ +I  GHAY A N +++FD S+   YG+ S++ +   + G RV    
Sbjct: 114 VTGHIPEIITMVERLIEKGHAYIAGNGDVLFDVSTFAAYGALSQQDLSMLQAGARVEVDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++ P EP W SPWG GRPGWHIECSAMSS +LG  FDIHGGG DL FP
Sbjct: 174 GKDDPLDFVLWKKAKPEEPSWGSPWGAGRPGWHIECSAMSSKHLGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N WIH G + +   KMSKS  NF T+ E+L       + + 
Sbjct: 234 HHENEIAQSCCASGQK-YVNTWIHTGMVQVNKEKMSKSLNNFFTVREVL-------KQYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
              +R  ++  HYR  ++++ + L +A   L +               +          A
Sbjct: 286 RETVRFFLINGHYRSQLNYSQENLDQARSSLERIYTALRGVTPTPVDLAANEYVAKFRQA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT  A+  + +LA+E          K  +L  +  A   +LGI         + +
Sbjct: 346 MNDDFNTPEALPVVFELAKEINRVKDSDSSKAAELAFVLKAITEVLGIAQQEPESFLQGN 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +++    IE L+ +R      K ++ AD  R +L +   ILED          T W++
Sbjct: 406 QDEDEVAQIEALIAQRNQARADKNWALADDARDKLNAMNIILEDS------AGKTTWRK 458


>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 465

 Score =  584 bits (1506), Expect = e-164,   Method: Composition-based stats.
 Identities = 184/479 (38%), Positives = 251/479 (52%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEQGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDI+DK+I RA +E         +  +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDIEDKMINRANKE------GITVFELAERFIKEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIPDMITLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDLSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWH+ECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------------TSTS 343
             +RL ML  HYR+P++F++  + +AE  L +  +                        S
Sbjct: 285 EALRLFMLQAHYRKPLNFSLDLIEQAESALKRIYKCYENLEYLIRNETGSNSSNSTLKAS 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
                   + A+ +DLNT  A   L ++ RE   + +                   ILGI
Sbjct: 345 LEQFKIKFIDAMEDDLNTAEATGYLFEMVREINTHANTCSKDVLILARDTLKELCGILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               E     I + I +LV++R    K K F+ AD IR +L+S G+I+ D       +R
Sbjct: 405 LEQYEQKEDEIPLEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIER 463


>gi|226309785|ref|YP_002769679.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254765181|sp|C0ZIF7|SYC_BREBN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226092733|dbj|BAH41175.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 468

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 174/492 (35%), Positives = 260/492 (52%), Gaps = 58/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++ NT+ R+   F  ++P  ++MYVCGPTVY++ HIGNARP IVFD L R L+Y   
Sbjct: 1   MGIQLTNTMTRRKEPFHTLEPGKVKMYVCGPTVYNYIHIGNARPAIVFDTLRRYLKYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+V+NITD+DDK+I  A QE         +  +  + T  +  D   L    P  Q
Sbjct: 61  E--VTFVQNITDVDDKLIRVANQE------GVTVKEVADRYTDAYNADLKSLNVSPPDIQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR    IP++I  +Q +I  G AYE+  ++ F T     YG  S + +D+ + G RV   
Sbjct: 113 PRVMQTIPEIIEFVQGLIEKGFAYESEGDVYFRTGRFQEYGKLSHQPLDDLQAGARVEIN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   E  W+SPWG GRPGWHIECSAM+  +LG+  DIH GG DL+F
Sbjct: 173 EKKEHPLDFVLWKAAKTGEVTWDSPWGEGRPGWHIECSAMALKFLGEEIDIHAGGTDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C    +  A  W+HNG LN++  KMSKS GNF+   +L E        +
Sbjct: 233 PHHENEIAQSECFTG-KVFARYWLHNGMLNIDNEKMSKSLGNFLLARDLSE-------KF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              +IR  ML  HYR PI+F+ + + +A   L +     T+                   
Sbjct: 285 GGQLIRFFMLQGHYRNPINFSEELIEQAANGLDRITTAYTNLSHRLDTARAEEPNDQAQE 344

Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
                G +    ++ + +D+NT +AI  +  + +E+            +    + +    
Sbjct: 345 QARIIGELRERFIAEMDDDINTANAITVIFDVVKEANLYLRHQNVGETEVRAYMDLLVEL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+++ +E   + +   I+ L++ER    K + F+ +D IR  L +KG +LED    
Sbjct: 405 TEVLGLDIAEEQ--ELLDSEIDALIEERTEARKARNFARSDEIRDLLAAKGIVLEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               +  RW++K
Sbjct: 460 ---PQGVRWRRK 468


>gi|330972601|gb|EGH72667.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 460

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 260/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H G  R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHPGYGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIEAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 286 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L ++ RE  +  +        L       A +LG+      +  +   
Sbjct: 346 NDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAGA 405

Query: 402 NKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +    +E L+Q RL     K ++ +D IR ++ + G +LED K        T W+
Sbjct: 406 EGRVDAAEVEALIQARLAARAAKDWAESDRIRDRITAMGVLLEDGK------GGTTWR 457


>gi|30316338|sp|Q8U227|SYC_PYRFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 477

 Score =  584 bits (1505), Expect = e-164,   Method: Composition-based stats.
 Identities = 183/495 (36%), Positives = 254/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF+ +    ++MYVCGPTVYD+ H+G+AR  I FDV+ R L +     
Sbjct: 2   LKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RAR+        +    +  +  + F++D   L        PR
Sbjct: 60  TVLMVMNFTDIDDKIIKRARE------TGEDPKELAERFIKIFLEDMEALKVKPADIYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+HI  +I  I  +   G+AYE ++ I F+    P YG  S  KI++ + G RV     
Sbjct: 114 VTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGEG 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFPH
Sbjct: 174 KKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E     W+H GF+ ++G KMSKS GNF+TI ELL       + +  
Sbjct: 234 HENEIAQSEACFGHE-WVKYWLHTGFVMVKGEKMSKSLGNFVTIRELL-------KRYEP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
            VIR  +L  HYR P+++T + L  A+  L +   T  +  +                  
Sbjct: 286 EVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFKT 345

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
                        A+ +D NT  A++A+ ++A    K                L  F   
Sbjct: 346 YEIIREGKRKFYEAMDDDFNTAEALKAVFEVANAINKYLTEANKPKESILRKALEFFKIV 405

Query: 389 AHILGIE----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + + G+       +    +     IE LV+ R  L K K++  AD IR++L+  G  LED
Sbjct: 406 SEVFGVFEDYFREETKEREESEKLIELLVEVRKQLRKEKRYELADMIREELKKLGIQLED 465

Query: 445 YKNPDNGQRMTRWKQ 459
             +       T WK+
Sbjct: 466 RGS------ETTWKR 474


>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 463

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 178/484 (36%), Positives = 253/484 (52%), Gaps = 50/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        +    +T +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRAAEN------GETFMALTDRMIAEMHADFASLNILPPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I ++Q +I   HAY A N +++F   S P+YG  SR+ +D+ + G RV  + 
Sbjct: 114 ATQHIHEIIDIVQKLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVEA 173

Query: 184 H-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           + K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+F
Sbjct: 174 NVKRNPMDFVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 PHHENEIAQSSCAHDG-PYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVL-------KYY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLS 353
            A  +R  ++  HYR  ++++ + L  A   + +            T            +
Sbjct: 286 DAESVRYFLMSGHYRSQLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAFVTRFRA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK------- 398
           A+ +D NT  A   L  +AR+  +         + L       A +LG+           
Sbjct: 346 AMDDDFNTPEAYSVLFDMARDINRLKTEDLSAANGLAAELRQLAGVLGLLEQDPEQFLKS 405

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             +  N +    IE L+++R      K +  AD  R +L   G +LED      G   T 
Sbjct: 406 GAQADNDDEVAEIEALIKQRNDARASKDWGMADKARDRLNEMGIVLED------GAAGTT 459

Query: 457 WKQK 460
           W++K
Sbjct: 460 WRRK 463


>gi|325272290|ref|ZP_08138699.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324102572|gb|EGC00010.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 460

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 179/478 (37%), Positives = 252/478 (52%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLTKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GESFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++           +            A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D  T  A   L  L RE  +  D        L         +LG+             
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDVDAAAGLAGRLRELGDVLGVLQLDADDFLRAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GATTWR 457


>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 483

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 179/503 (35%), Positives = 252/503 (50%), Gaps = 66/503 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNT+ RK  EF  + P  + +YVCG T Y+  HIGNARP +V+DV++R L +   
Sbjct: 2   STIRVYNTMTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V+N TD+DDKII  A +E           +I ++  + + +   +L        
Sbjct: 62  D--VTHVQNFTDVDDKIIREANKE------GVTWDVIANRYIKAYFEVMDKLHVRRAHVY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR ++HIP +I+ +Q +I HG+ Y  + ++ +      +YG  S R +D+   G RV   
Sbjct: 114 PRVSDHIPDIIHTVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK + P EP W+SPWG+GRPGWHIECS MS+ YLG  FD HGGG DLIF
Sbjct: 174 ERKENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A         W+HNGF+ +   KMSKS GNF T+ ++L       + +
Sbjct: 234 PHHENEIAQSEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDIL-------KEY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------- 348
              V+R  +L THYR P+DF+  RL EA   L +    + +   +               
Sbjct: 287 EPEVLRYFILQTHYRSPLDFSDARLKEASRSLERLRTAAQNLTELKGVISVGPDEDSLAL 346

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PI 384
                    + L A+ +D NT  AI  L  L +E    H  +                  
Sbjct: 347 REKVSGFVESFLEAMRDDFNTSLAISYLFALGKEINILHQSVMTGGQKPDGKLVDMMDKA 406

Query: 385 FNASAHILGIEVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           +     I+GI                  + AIE L+ ER    K K F  AD IR +L  
Sbjct: 407 WKEMTSIIGILEEDPGAKTEAVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELAQ 466

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
           KG +LED        +  RWK++
Sbjct: 467 KGILLEDT------PQGVRWKRQ 483


>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783950|ref|YP_089779.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|61216165|sp|Q65PC8|SYC_BACLD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52346452|gb|AAU39086.1| CysS [Bacillus licheniformis ATCC 14580]
          Length = 467

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 169/489 (34%), Positives = 259/489 (52%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IVFD + + L Y   
Sbjct: 1   MTLTLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV N TD+DDK+I+ A +      + + + +I  +  + + +D   L C      
Sbjct: 61  E--VQYVSNFTDVDDKLIKAANE------LGEEVPVIAERFIKAYFEDVGSLGCTKADCH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I  IQ +I  G+AYEA+ ++ + T S   YG  S + +DE + G R+   
Sbjct: 113 PRVTENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KEH 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI+++V+ L   +    +     ++                   
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSVELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A  +A+ +D NT +AI  L  LA+ +                 + +F+    
Sbjct: 345 EKIEEQRKAFQTAMDDDFNTANAISVLFDLAKHANYYLQEKNTAEHVIQAFIQLFDEICS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG  + ++ L   +   IE+L+++R    + + F+++D IR QL+S   ILED      
Sbjct: 405 VLGFSLKEQEL---LDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -PQGTRWKR 464


>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 459

 Score =  583 bits (1504), Expect = e-164,   Method: Composition-based stats.
 Identities = 185/477 (38%), Positives = 267/477 (55%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ I+P  + MYVCG TVYD  HIG+AR +  FDV+YR L+    + 
Sbjct: 4   LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDI+DKII+RA      +        +  +      +D   L  L PTH+PR
Sbjct: 63  -VNYVRNITDIEDKIIKRA------LERGITPEQLVEETIADMRQDAAALGLLPPTHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+H+  M+ +I+ +I +G AY A N ++ +       YG  S R +D+ + G RV    
Sbjct: 116 ATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDP 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS H+LG+ FDIHGGG DL FP
Sbjct: 176 NKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A    +  N W+HNGF+N++G KMSKS GNF TI ++L       + + 
Sbjct: 236 HHENEIAQSEGAHG-HQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVL-------QHFD 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIID-----PAVL 352
             VIR  ++ +HYR P+++T   L +A+  L++        +  TS GI           
Sbjct: 288 GEVIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAARFK 347

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--------N 402
           +A+ +D  T  A+  L +LA E  K+ D  L  +      +LG+      +         
Sbjct: 348 AAMDDDFGTSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGVGEG 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +  +  +E L+Q R      K ++ +D IR +L +KG +LED      G   T W++
Sbjct: 408 ELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLED------GAGGTIWRR 458


>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 481

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 176/502 (35%), Positives = 250/502 (49%), Gaps = 65/502 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YN + R+  EF  + P  + +YVCG T Y+  HIGNARP +V+D + R L +   
Sbjct: 1   MSIRVYNDMTRQKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDTIRRFLDHEGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  A +E           +I ++  + + +   +L        
Sbjct: 61  D--VTYVQNFTDVDDKIIRAANEE------GVTWDVIANRYIKAYFEVMDKLHVKRAHIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP +I+ +Q +I +G+ Y  + ++ +      +YG  S RK+D+   G RV   
Sbjct: 113 PRVSEHIPDIIHTVQELINNGYGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK + P EP W+SPWG+GRPGWHIECS MS+ YLG   D HGGG DLIF
Sbjct: 173 ERKENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A  +      W+HNGF+ +   KMSKS GNF T+ +LL       + +
Sbjct: 233 PHHENEIAQSEGATGVHPFVRYWVHNGFITINEEKMSKSLGNFKTVYDLL-------KEY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
               IR  +L THYR P+DF+ +RL EA   L +      +                   
Sbjct: 286 EPETIRYFILNTHYRSPLDFSQERLAEAGRSLERLRTAQNNLQEIQQVITVGPDAESLAL 345

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PI 384
                 +      A+ +D NT  AI  L  LA+E    H+ +                  
Sbjct: 346 RDKVEELRKGFFDAMSDDFNTSLAISYLFALAKEINVYHNAIISGAKKPDGKLVEQIDKA 405

Query: 385 FNASAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +     ++GI   +   N       N    I   ++ER    K + F+ AD IR +L +K
Sbjct: 406 WKEMIGVIGILENQPAANGEGGAVSNEEAEIAARIEERQAARKARDFAKADAIRDELAAK 465

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G ILED        +  RWK+K
Sbjct: 466 GIILEDT------PQGVRWKRK 481


>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
           16795]
 gi|164604516|gb|EDQ97981.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
           16795]
          Length = 474

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 185/488 (37%), Positives = 262/488 (53%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I+   ++MYVCGPTVY+F HIGNARP I+FD L R L Y   + 
Sbjct: 9   VKLYNTLSRKKEEFKPIEEGKVKMYVCGPTVYNFIHIGNARPFIIFDTLRRYLEYRGYD- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII+R+ +E      N     + +K  +++  D   L     +  P+
Sbjct: 68  -VTFVQNFTDVDDKIIKRSHEE------NITPEEVATKYIKEYFVDADGLGIKRASVHPQ 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I Q+I  ++ +   G+AY  N ++ FDT    +YG  S  K +E + G R+     
Sbjct: 121 VTDNIEQIIAFVKELEDKGYAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARIEVNDQ 180

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW SPWG GRPGWHIECS MS+ YLG+  DIH GG DL FPH
Sbjct: 181 KRHPMDFVLWKAKKEGEPGWASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQDLKFPH 240

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  +N W+HN ++N+   KMSKS GNF T+ E+ E        +  
Sbjct: 241 HENEIAQSEARSG-KNFSNYWLHNEYINVNNEKMSKSLGNFFTVREISEI-------YDL 292

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
            V+RL ML THYR PI+F+ + L +++  L +                            
Sbjct: 293 EVVRLFMLSTHYRNPINFSDEILNQSKAGLERLYNAKEKAEFTINNLEDSKMTEEEAKLQ 352

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     + A+ +D+NT  A+ A+ +LA+    N             L  FN    +
Sbjct: 353 DELASFRQKFIDAMDDDVNTADAVSAIFELAKFMNSNITENSSKEFAQKALDEFNELTGV 412

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I V K+     +   IEKL+++R    K K F  AD IR+QL  KG +LED +     
Sbjct: 413 LNI-VNKDKKEDILDEEIEKLIEQRTEAKKNKNFQLADEIRQQLLDKGIVLEDTR----- 466

Query: 452 QRMTRWKQ 459
            +  +WK+
Sbjct: 467 -QGVKWKR 473


>gi|61216275|sp|Q7NX82|SYC_CHRVO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 457

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 185/477 (38%), Positives = 267/477 (55%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ I+P  + MYVCG TVYD  HIG+AR +  FDV+YR L+    + 
Sbjct: 2   LSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDI+DKII+RA      +        +  +      +D   L  L PTH+PR
Sbjct: 61  -VNYVRNITDIEDKIIKRA------LERGITPEQLVEETIADMRQDAAALGLLPPTHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+H+  M+ +I+ +I +G AY A N ++ +       YG  S R +D+ + G RV    
Sbjct: 114 ATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVDP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS H+LG+ FDIHGGG DL FP
Sbjct: 174 NKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A    +  N W+HNGF+N++G KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSEGAHG-HQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVL-------QHFD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIID-----PAVL 352
             VIR  ++ +HYR P+++T   L +A+  L++        +  TS GI           
Sbjct: 286 GEVIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAARFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--------N 402
           +A+ +D  T  A+  L +LA E  K+ D  L  +      +LG+      +         
Sbjct: 346 AAMDDDFGTSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGVGEG 405

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +  +  +E L+Q R      K ++ +D IR +L +KG +LED      G   T W++
Sbjct: 406 ELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLED------GAGGTIWRR 456


>gi|312876620|ref|ZP_07736601.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796573|gb|EFR12921.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 465

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 256/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +   EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E         +  +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKE------GITVFELARRFIEEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTSTS 343
             +RL ML  HYR+P++F++  + +AE+ L +                       +   +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSESDDKLKAA 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
              +    + A+ +DLNT  A   L ++ RE   + +                   ILGI
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANSCSKEALTFAKDTLKELCGILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   + I   I +LV++R    K+K F+ AD IR +L+S G+I+ D       +R+
Sbjct: 405 LEQYGAKEEAIPQEILELVEKRNQARKVKNFAEADRIRDELKSLGYIVLDTPQGTKIERI 464


>gi|307131980|ref|YP_003883996.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306529509|gb|ADM99439.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 461

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA          + I+ +T +   +   D   L    P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIKRA------TENGETITQLTDRMIGEMHTDFDALNIQRPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I ++I L++ +I   HAY AN  +++F   + P YG+ SR+ +++ K G RV    
Sbjct: 114 ATHYIAEIIELVEQLIARRHAYVANNGDVMFSVDTAPGYGALSRQDLEQLKAGARVEITE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGE-YVNYWMHTGMVMVDREKMSKSLNNFFTMRDVL-------MHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSA 354
           A  IR  ++  HYR  +++T + L +A   L +                    +     A
Sbjct: 286 AETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDAAASAAGGDAFESRFRDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           L       A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDAAAANGLAAALRRLAGVLGLLEQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+++R    + K ++ AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|26989624|ref|NP_745049.1| cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|37999406|sp|Q88IU4|SYC_PSEPK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24984507|gb|AAN68513.1|AE016483_4 cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 460

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 252/478 (52%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR++I++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKRIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++           +            A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D  T  A   L  L RE  +  D        L         +LG+   +         
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEGLIQARLKARADKNWAESDRIRDQLTAMGVVLEDSK------GTTTWR 457


>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 484

 Score =  583 bits (1503), Expect = e-164,   Method: Composition-based stats.
 Identities = 183/504 (36%), Positives = 266/504 (52%), Gaps = 71/504 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+  EF  I+P  +RMYVCG TVYD  H+G+AR M+VFDV+ R LR    E 
Sbjct: 2   LRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        + I  +T++  +   +D   L  L P  +PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAHER------GENIQELTARYIEALHEDAEGLQILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  +I ++Q ++  G+AY+  N +I +D S    YG+ S +++DE + G RV    
Sbjct: 114 ATESMEAIIAMVQRLLEQGYAYQGENGDIYYDVSHFEGYGALSGKQLDELRAGERVQVSE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKPNEPAWDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEAATGCK-FVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLE-------HYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTS 343
             V+R  +L +HYR P+++T Q+L  A+  +++                      + +  
Sbjct: 286 PEVLRYFILSSHYRSPLNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAEG 345

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
                     A+ +D NT  A+  L+++     +  +         L  +  +   ILG+
Sbjct: 346 DDPFVQRFCEAMDDDFNTPEALALLNEIRHALNRAREEGDKDKVQYLARLLPSLGAILGL 405

Query: 395 EVCK-------------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
              +                   E         IE+L+ +R    K K +++AD++R  L
Sbjct: 406 LTQEPEQFLRDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKDWAAADHLRDVL 465

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +G  LED          T W++
Sbjct: 466 KKQGITLEDTPT------GTLWRR 483


>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 474

 Score =  582 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 185/493 (37%), Positives = 260/493 (52%), Gaps = 60/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ + P ++ MYVCGPTVYD +HIG+AR  +VFD+++R L+    E 
Sbjct: 3   LTLYNTLTRQKETFKPLKPGHVSMYVCGPTVYDSSHIGHARSAVVFDIVFRYLQESGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +       +     ++     +F +D   LA L PT +PR
Sbjct: 62  -VTYVRNFTDVDDKIINRANER------DMDCQALSEIYIDEFHRDMDALAVLRPTLEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I +   ++  GHAY  + ++ FD  S  +YG  S RK+++ + G RV     
Sbjct: 115 ATEFIKEIIEVTSKLVEKGHAYVVDGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVDSR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK   P EP WESPWG GRPGWHIECSAMS   LG+ FDIHGGG DLIFPH
Sbjct: 175 KKDPFDFALWKAKKPGEPAWESPWGEGRPGWHIECSAMSWSRLGETFDIHGGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS  A   ++    W+HNGF+N++  KMSKS  NF+T+ E+L+        +  
Sbjct: 235 HENEVAQSEAAFG-QQFVRYWMHNGFVNIDSEKMSKSLNNFLTVKEILD-------QFHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDP---------AV 351
             +RL +L  HYR P+DFT Q + EA   L +      +   S G +D            
Sbjct: 287 EAVRLFLLSKHYRSPVDFTEQAMKEAASGLDRVYSCLQRILESVGGLDDDFQISGHWSRF 346

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHILG----- 393
            + + +D NT  A+  L +  R+  +  D                       +LG     
Sbjct: 347 CACMDDDFNTAGALGILFEAVRDVNRLLDGDLTGDDQVRATEAGAAIVKMGGVLGMFQED 406

Query: 394 ----IEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                E  KE   ++       ++ L+ +R    K K +++AD IR QL   G  +ED  
Sbjct: 407 PVAYFEGKKEQAAQDGGFDPAMVDDLIAKRSQARKDKDWNTADAIRDQLTEMGVAIEDTP 466

Query: 447 NPDNGQRMTRWKQ 459
           +       T WK 
Sbjct: 467 D------GTIWKM 473


>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 490

 Score =  582 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 185/511 (36%), Positives = 248/511 (48%), Gaps = 77/511 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F  + P  +++Y CG TVYD  HIG+AR  +VFDV+ R LR+     
Sbjct: 1   MQVYNTLSRRKEAFIPLKPGIVQIYACGVTVYDDCHIGHARSAVVFDVIVRYLRFLG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V++VRN TDIDDKII+RA +EH       +   +       F +D   L       +P+
Sbjct: 59  KVSWVRNFTDIDDKIIQRAEREHT------SWKTVAETYIASFQRDMAALGVAPADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI ++I  IQ +   G AY+ N ++ F  +  P YG  S R +D+   G RV     
Sbjct: 113 ATDHIDEIIGFIQVLEDQGLAYQRNGDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK S P EP W+SPWG GRPGWHIECSAMS HYLG+ FDIHGGG DLIFPH
Sbjct: 173 KDNPFDFALWKASKPGEPAWDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG + +   KMSKS GNF TI E+L         +  
Sbjct: 233 HENEIAQSEAAHG-KPLARYWLHNGMVTVNQEKMSKSLGNFFTIREVLA-------KFHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            V+R  ++  HYR P+DF+ Q L EAE  L +   T                        
Sbjct: 285 EVVRFFLIQNHYRSPLDFSDQALAEAENALERLYSTLARLDQTTGPIAAPEAISGAFSLS 344

Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPI 384
                       I    L A+ +D NT  A+  L    R              +   L  
Sbjct: 345 GLDSEEQSRLLTIRSRFLEAMDDDFNTAQALGVLFDAVRLLNRIVEHNPSGNADMSALAW 404

Query: 385 FNASAHILG-------------IEVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSAD 429
                 +LG             ++  ++  +        IE+L+  R    K + F+ AD
Sbjct: 405 TRRELTVLGGILNLLQQDPQTMLQNLRQKTDALTIPPSEIERLIAARAEARKQRDFTKAD 464

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR+QL   G +LED        +   W+ K
Sbjct: 465 AIRQQLAEAGVLLEDT------PQGAVWRVK 489


>gi|167769106|ref|ZP_02441159.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
           17241]
 gi|167668746|gb|EDS12876.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
           17241]
          Length = 462

 Score =  582 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 175/486 (36%), Positives = 254/486 (52%), Gaps = 54/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+P  +RMY CGPTVY++ HIGNARP+ VFD L R L Y   + 
Sbjct: 1   MKIFNTLTRQKEEFVPIEPGKVRMYACGPTVYNYIHIGNARPICVFDTLRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I +A +E         +  +  +   +++ DT  L        PR
Sbjct: 60  -VTFVQNFTDIDDKLINKANEE------GITVREVAERYIGEYMTDTKGLGIRPADIHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I +++ +   G AYE +  + F +     YG  S + ++E + G R+     
Sbjct: 113 ATENIDTIINMVKTLEEKGFAYERDGSVYFRSRRFEEYGKLSHQPLEELEAGARIDVSDK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W SPWG GRPGWHIECSAM   +LG   DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSAMIRRHLGDTIDIHCGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C    E   + W+HNG++N++ RKMSKS GNF T+ E+ E   +       
Sbjct: 233 HENEIAQSECCTGAE-YVHYWMHNGYINVDNRKMSKSLGNFFTVREVAEKFGY------- 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------WPQTSTSK 344
             I+  ML  HYR PI+++++ + +    L +                    W       
Sbjct: 285 EPIKFMMLQAHYRSPINYSLEVIEQCRAALERLHNCRDSLDFALESALGQGDWHAFREKM 344

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGI 394
                  + A+ +DLNT   I AL ++AR+                 +  F+    +LG+
Sbjct: 345 DARAAQFVEAMDDDLNTADGIAALFEMARDINTYIAQPQPEEAVAYAVKRFDELCGVLGL 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
              +   +K++   +E L+ ER    K K F+ AD IR QL   G +L+D        + 
Sbjct: 405 LYNR--ASKDLDSEVEALIAERQAARKAKDFARADAIRDQLAGMGILLKDT------PQG 456

Query: 455 TRWKQK 460
            +W +K
Sbjct: 457 VQWSRK 462


>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 465

 Score =  582 bits (1502), Expect = e-164,   Method: Composition-based stats.
 Identities = 183/480 (38%), Positives = 256/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +   EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDI+DK+I RA +E         +  +  +  +++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDIEDKMINRANKE------GITVFELAERFIKEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIPDMIVLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARVDLSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  WIHNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWIHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTSTS 343
             +RL ML  HYR+P++F++  + +AE+ L +                       +  T 
Sbjct: 285 EALRLFMLQAHYRKPLNFSLDLIEQAEVALKRIYTCYENLEFLIQNETSSSENNDKLKTV 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
              +    + A+ +DLNT  A   L ++ RE   + +            +      ILGI
Sbjct: 345 IEQLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANFCSKETLTFAKDVLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   + +   I  +V++R    K+K F+ AD IR +L+S G+I+ D       +R+
Sbjct: 405 LEQYSSKEEYVPQEILDMVEKRNQARKLKNFAEADRIRDELKSLGYIVLDTPQGTKIERI 464


>gi|242240078|ref|YP_002988259.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242132135|gb|ACS86437.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 461

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 257/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FD++ R LRY   + 
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDMVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        + I+ +T +   +   D   L  L+P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIKRAAEN------GETIAQLTDRMIAEMHADFASLNILSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I   HAY A N +++F   + P YG  SR+ +++ K G RV    
Sbjct: 114 ATHHIAEIIELVEKLIARRHAYVAENGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEIAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKLNEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H G + ++  KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTCAHGGE-YVNYWMHTGMVMVDREKMSKSLNNFFTVRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +            +       +    +A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDESASPAGGEAFEARFCTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHLN---- 402
           + +D NT  A   L  +AR+  +           L       A +LG+      L     
Sbjct: 346 MDDDFNTPEAYSVLFDIARDINRLKAEDAAAANALAAELRRLAGVLGLLEQDPELFLQSG 405

Query: 403 ----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                +    I+ L+++R    + K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQPCDDEVQEIDALIKQRNDARQSKDWAAADAARNRLTDMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 469

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 182/490 (37%), Positives = 254/490 (51%), Gaps = 54/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN L RK   F  +    +  Y CGPTVYD+ HIGNARP IVFDVL R + +   
Sbjct: 1   MSLVLYNDLTRKKEPFVPLKDGEVGFYSCGPTVYDYFHIGNARPFIVFDVLRRYMEFSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TD+DDK+I RA +      +   +  +  K    + +D   L     TH 
Sbjct: 61  --RVTFVQNFTDVDDKMINRANE------MGITVQELAEKTIADYFEDADALGIKRATHY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI ++I L++ +   GHAYE +  + FD SS P YG  SR+ I+E + G+R+   
Sbjct: 113 PRATEHIEEIIDLVKRLEESGHAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRIEVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK   P EP W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 SSKRNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+  A   E     W+HN ++ ++  KMSKS GNF+T  E         + +
Sbjct: 233 PHHENEIAQAEAAT-EEVFVRYWLHNEYILIDKEKMSKSLGNFMTAREAR-------KHY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKGIID 348
               IR+ ML  HYR P++F  + L +A   L +               P +     I++
Sbjct: 285 SPLAIRMFMLSAHYRSPVNFGPEGLQQATAALERLHNCWSDFRYAADNRPHSQGQDDIVE 344

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLAREST---KNHDLL---------PIFNASAH 390
                    ++A+ +D NT  AI  + +         K +D L           F     
Sbjct: 345 SIKRHRDDFVAAMDDDFNTAGAIGHIFEAVSTVNGHLKGNDSLSSEGIKAIEDFFRDVDS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           I+G+         + S  IE L+++R      K F+++D IR QL +KG ILED      
Sbjct: 405 IMGLIGLDSDGQDDDSEEIESLIRKREEARSAKDFATSDAIRDQLAAKGVILEDT----- 459

Query: 451 GQRMTRWKQK 460
             + T+WK+K
Sbjct: 460 -PQGTKWKKK 468


>gi|323138201|ref|ZP_08073273.1| cysteinyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396453|gb|EFX98982.1| cysteinyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 455

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 233/467 (49%), Positives = 304/467 (65%), Gaps = 20/467 (4%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + ++IYNTL R+  EF+ +D SN+RMYVCGPTVYD+AHIGNARP+IVFDVLYRLLR++
Sbjct: 1   MSQTLRIYNTLAREKQEFRPLDASNVRMYVCGPTVYDYAHIGNARPLIVFDVLYRLLRHH 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTYVRNITD+DDKI  RA +         +I  +T +  + F +D   L CL PT
Sbjct: 61  YGADHVTYVRNITDVDDKINARAAER------GISIRELTEETNRVFQEDVRALGCLEPT 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            QPRAT HI +MI +I+ +I   HAY A+  ++FD  S+ +YG  SRR +DE   G RV 
Sbjct: 115 VQPRATEHIAEMISIIERLIASRHAYAADGHVLFDVPSMKDYGRLSRRSLDEMLAGARVD 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K+   DF+LWK S   EPGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGG+DL
Sbjct: 175 VAPYKRGDMDFVLWKPSKENEPGWDSPWGRGRPGWHIECSAMSWKHLGETFDIHGGGIDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA   +  AN W+HNGFL +EG KMSKS GNF+TI+ELL T+KFGGR
Sbjct: 235 VFPHHENEIAQSRCAFDHDVMANYWMHNGFLQVEGEKMSKSLGNFVTIHELLHTEKFGGR 294

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPAVLSA 354
            WP  V+RLAML THYR+PID+TV+ L EAE  L +W +      T+          + A
Sbjct: 295 KWPGEVLRLAMLRTHYRQPIDWTVKALEEAETSLRRWAEFIEAGETTGDSSDFFGQFVGA 354

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVCKEHLNKNISIAIEKLV 413
           L +DLNT  A+  LH +      +  L+ +  +A +++  IE  +E      + AI  L+
Sbjct: 355 LKDDLNTPLAMSFLHSVFDPRLLDDALMLVGIDARSYVQWIE--RETRRGVDAAAIGALI 412

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             RL     K ++ +D IR +L + G  L+D K+       T W+ K
Sbjct: 413 NARLAARAAKNWAESDRIRDELAAMGIALKDNKDGT-----TTWEVK 454


>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 467

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 180/476 (37%), Positives = 254/476 (53%), Gaps = 45/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   F  IDP  +RMYVCG TVYD+ H+G+AR M+ FDV+ R LR    + 
Sbjct: 1   MQIYNTLTRRKETFTPIDPGRVRMYVCGMTVYDYCHLGHARVMVAFDVITRYLRARGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKI++RA +        + I+ +T +      +D  RL  L P  +PR
Sbjct: 60  -VTYVRNITDIDDKILKRAEEN------GETIASLTDRMIDAMHEDEGRLGVLRPDAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ +++ +IQ +I  G+AY A N ++ +      +YG  + R  D+ + G RV  + 
Sbjct: 113 ATQHVDEIVTMIQTLIDKGYAYAASNGDVYYRVRKFADYGKLNNRDPDDMRAGARVDVEE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P E  W SPWG GRPGWHIECSAMS+  LG+ FDIHGGG DL FP
Sbjct: 173 LKEDPLDFVLWKAAKPGEADWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++  N W+H G + ++  KMSKS GNF TI E+LE          
Sbjct: 233 HHENEIAQSEAATG-KQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLE-------HHD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------IDPAV 351
             V+R  ++ +HYR PI++    L +A   L ++        +             D   
Sbjct: 285 PEVVRYLLVASHYRSPINYAPDSLADARKSLERFYNALDGVALEGVETPGEVDPSFDRRF 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIE------VC 397
           + A+ +D NT  AI  L  LARE  +           L         +LG+         
Sbjct: 345 IEAMDDDFNTAGAISVLFDLARELNRARKEAPEQAPALAAELKRLGGVLGLLQQEPAVFL 404

Query: 398 KEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           K    +       IE  + ER    + + F+ AD IR +L + G +L+D +   + 
Sbjct: 405 KGGAGELPLSEAEIEARISERAEAKQARDFARADAIRDELAALGIVLKDSREGTSW 460


>gi|297545336|ref|YP_003677638.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296843111|gb|ADH61627.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 466

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 187/488 (38%), Positives = 255/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EFQ ++   + MYVCGPTVY++ HIGNAR  IVFD + R L Y   + 
Sbjct: 1   MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA++E      N     +  K   ++ KD   L     T  P+
Sbjct: 60  -VNYVQNFTDIDDKIIKRAQEE------NVTTKELAEKYIHEYFKDADNLGIKRATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  ++  I+ +I  G+AY  N  + F+T+   +YG  S + I+E + G R+     
Sbjct: 113 ATEHIEDIVKFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK   P EP W+SPWGRGRPGWHIECS MS+ YLGK  DIH GG DLIFPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ +  W+H G+LN+   KMSKS GNF T+ E+ E        +  
Sbjct: 233 HENEIAQSEALYG-QQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----------- 353
            V+RL MLM HYR PI+F++  + +A     +      +   +                 
Sbjct: 285 EVLRLFMLMAHYRNPINFSLDLMDQANSAYERLLNAMANLKHLLTVCKERELNEEEKRIV 344

Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                       A+ +D NT  AI  L ++A+ +  N            +L +F   + I
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTANINLSGNSSKELVKYILDMFLKLSEI 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   +          I  L+++R    K K +  AD IR +L  KG ILED       
Sbjct: 405 LGL-FYRTVKTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKGIILEDT------ 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 PEGVRWKR 465


>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878786|sp|Q9UYV2|SYC_PYRAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 477

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 187/495 (37%), Positives = 253/495 (51%), Gaps = 60/495 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IK+YNTL RK  E + +    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +   
Sbjct: 1   MGIKVYNTLTRKKEELKPLRDGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TDIDDKII+RA++        +    +  +  + F++D   L        
Sbjct: 61  --TVLMVMNFTDIDDKIIKRAQE------TGEDPGKLAERFIKVFLEDMNALKVKPADIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HI  +I  I+ +   G+AYE ++ + F+     +YG  S  KI+E + G RV   
Sbjct: 113 PRVTEHIDDIIEFIKKLKEKGYAYEGSDGVYFEVQKFKDYGKLSGVKIEELRKGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      E     W+H GF+ ++G KMSKS GNF+T+ ELL       + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVRYWLHTGFVMVKGEKMSKSLGNFVTVRELL-------QRY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------------ 338
              VIRL +L  HYR P+D+T + L  A+  L +                          
Sbjct: 285 SPEVIRLFVLQKHYRSPLDYTEEGLQHAKNNLERLYNTLENIRIAMRNAELSYKWSEKDF 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
           +   +          A+ +D NT  A++A+ +++    K                L  F 
Sbjct: 345 EAYEAIREARKKFYDAMDDDFNTAEALKAVFEVSNAINKYILEVDKPKESILRKALEFFK 404

Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + + GI  +  KE         IE LV+ R  L K K+F  AD IR++L   G  LED
Sbjct: 405 VVSEVFGIFEDYFKEEKKGEEEKLIELLVEVRKQLRKEKRFDLADKIREELRKLGIQLED 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + T WK+
Sbjct: 465 K------GQETVWKR 473


>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 467

 Score =  582 bits (1501), Expect = e-164,   Method: Composition-based stats.
 Identities = 178/488 (36%), Positives = 259/488 (53%), Gaps = 55/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ RK  EF  ++   ++MYVCGPTVY+F H+GNARP  VFD L R   Y   E 
Sbjct: 1   MKIYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY++N TD+DDKII+R+ +E        +   +  K  +++  D   L     T  P+
Sbjct: 60  -VTYIQNFTDVDDKIIKRSHEE------GISPEEVAEKYIKEYFIDCDGLGIKRATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I  +I  +Q++I  G+AYEA  +++F T     YG  S + I+E ++G R+     
Sbjct: 113 VTDNIDNIIVFVQDLIDKGYAYEAGGDVLFRTRKFKEYGKLSHQNIEELELGARIDVDDK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS+ YLG   DIH GG DL FPH
Sbjct: 173 KEDPLDFVLWKAKKEGEPGWQSPWGEGRPGWHIECSVMSNRYLGNTIDIHAGGQDLQFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     A  W+HNG++N++G KMSKS GNF T+ ++          +  
Sbjct: 233 HENEIAQSECRNG-HTFARYWMHNGYINVDGEKMSKSLGNFFTVRDI-------SNKYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
            ++R  +L T YR P++F+   L +A+  L +      +   I                 
Sbjct: 285 GLVRFFLLATQYRNPVNFSDTVLEQAKAGLERLTNARDNAEFILGNLADSSLRDEEKDMV 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     + A+ +DLNT  AI  + +LA+    N             L IFN    +
Sbjct: 345 AGLDKYRERFIEAMDDDLNTADAISVIFELAKFMNTNISDQSSKEFVQLNLDIFNELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I       + ++S  +E L+ +R    K K F+ AD IR +L + G  +ED +     
Sbjct: 405 LNIANKSVEEDDSLSQKVEDLIAKRAQAKKEKNFALADQIRDELTAMGIAIEDTR----- 459

Query: 452 QRMTRWKQ 459
            +  +WK+
Sbjct: 460 -QGVKWKR 466


>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|34222758|sp|Q9JWJ3|SYC_NEIMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 699

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 230 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 287

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 288 TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 341

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 342 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 401

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 402 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHH 461

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 462 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 521

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 522 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 574

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 575 LSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 634

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 635 DPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 690

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 691 --AGGTTWRR 698


>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|187629838|sp|A5D5M0|SYC_PELTS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 484

 Score =  582 bits (1500), Expect = e-164,   Method: Composition-based stats.
 Identities = 177/505 (35%), Positives = 253/505 (50%), Gaps = 71/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   FQ  +P  + MYVCGPT Y++ H+GNARP++ FD + R L +   E 
Sbjct: 1   MEIYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII RA++E       D    +  +   ++ KD   L        P 
Sbjct: 60  -VLFVQNFTDVDDKIINRAQEE------GDDPLALARRYIGEYFKDADALNVRRADRHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HIP +I ++  ++  G AY  +  + F+      YG  S R +++ + G RV     
Sbjct: 113 VSEHIPDIIKMVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS  YLG  FDIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+ +   KMSKS GNF  + ++L         +P 
Sbjct: 233 HENEIAQSEAATG-QPFVRYWMHNGFITVNEEKMSKSLGNFFLVRDILA-------KFPP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
            ++R  +L THYR P+DF  +++  A   L +   +                        
Sbjct: 285 ELVRFFLLSTHYRSPLDFDGEKMAAAGRGLERIKTSLRLLYEALERPVSEGVQAVCSRDP 344

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNA 387
              I  +  +A+ +D NT  AI A+  LARE+                      L +FN 
Sbjct: 345 FDEIRASFEAAMDDDFNTALAIGAVFDLAREANTAVQRTGPAVSGQDRQILQYALDLFNE 404

Query: 388 SAHILGI--------EVCKEHLNKNISIAIEKLV----QERLILLKMKKFSSADYIRKQL 435
              +LGI         +  +    + S  +E L+    + R    K K +S+AD IR  L
Sbjct: 405 FNEVLGIFKVDGASGRLLIDGAAGDDSGLVEGLINLILEVRQEARKRKDWSTADRIRDGL 464

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
           +  G +LED        +  RWK++
Sbjct: 465 KELGILLEDT------PQGVRWKKQ 483


>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|229558718|sp|B0TC35|SYC_HELMI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 481

 Score =  581 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 181/501 (36%), Positives = 256/501 (51%), Gaps = 65/501 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL R+   F       + MYVCGPT YD+ H+GNARP++VFD + R L +   
Sbjct: 1   MSLRVYNTLSREKETFVPHKAGRVGMYVCGPTTYDYIHLGNARPLVVFDTIRRYLEHVGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y++N TDIDDKII RA++      I +    + ++  +++ +D   L     T  
Sbjct: 61  E--VVYIQNFTDIDDKIIHRAKE------IGEDPIAMAARFVEEYYRDAKALNVRPATIH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ + H+ ++I +I  ++  GHAYE   ++ F   S  +YG  S R +++ + G RV   
Sbjct: 113 PKVSAHMAEIIAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 173 ERKRHPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS         A  W+HNGF+ +   KMSKS GNF T+ E+L       + +
Sbjct: 233 PHHENEIAQSEACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFTLREIL-------KRF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA-- 350
           P  VIR  +L THYR PIDF   +L  A+  L +              S  +G   PA  
Sbjct: 286 PGDVIRFYLLSTHYRSPIDFDDSKLEAAQKGLQRLRTSRRLIEEALAASGKEGAERPAGQ 345

Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTK---------------NHDL 381
                            A+ +D NT  A+  L  LARE+                    +
Sbjct: 346 REKLEEQWLAAKKGFREAMDDDFNTALALSMLFDLAREANTFLHGGFALTPEDRQLLLQV 405

Query: 382 LPIFNASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
              F   A +LGI++       +   +   +  L+  R    K K +++AD IR  L+  
Sbjct: 406 AETFEELAGVLGIDLAGGAAAADDNTVDGLMNLLIGIRAEARKKKDWATADRIRDGLKEL 465

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G ++ED        +  RWK+
Sbjct: 466 GIVIEDT------PQGARWKK 480


>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 459

 Score =  581 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 173/479 (36%), Positives = 259/479 (54%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  +F+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+     
Sbjct: 2   VQIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +        ++I+ +T + T+   +D   L  L P  +P 
Sbjct: 61  -LKYVRNITDVDDKIIKRANENK------ESINDLTLRMTKAMHEDFDSLNMLRPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +++ +I  GHAY A + +++FD S+   YG+ S++ +   + G+RV    
Sbjct: 114 VTGHMDEIIEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FP
Sbjct: 174 DKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+  E   N WIH G + +   KMSKS  NF T+ ++L       + + 
Sbjct: 234 HHENEIAQSCCANNGE-YVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVL-------KEYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
              +R  ++  HYR  ++++ + L +A   L +          I+              A
Sbjct: 286 PESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVKPIECELESNEFVIKFRKA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEH 400
           + +D NT  A+  L +LA+E  +  +        L  I      +LG+         +  
Sbjct: 346 MDDDFNTPEALPVLFELAKELNRVKESDAIQAGQLAFILRTIGEVLGVAQQAPEAFLQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + N    IE L+ +R      K +++AD  R  L + G ILED          T W++
Sbjct: 406 QDDNEVATIEALIVKRNDARASKNWAAADEARDALNALGVILEDS------AGKTTWRK 458


>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254781681|sp|B9LZV4|SYC_GEOSF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 494

 Score =  581 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 198/516 (38%), Positives = 262/516 (50%), Gaps = 80/516 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL     EF  ++P  ++MYVCG TVYD  HIG+AR  +VFDV+YR   +   
Sbjct: 1   MGLRVYNTLSGNKEEFVPVEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYFCHLGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN TDIDDKII RA +E           +I+ +  ++F +D  RL    PT Q
Sbjct: 61  D--VTYVRNYTDIDDKIINRANRE------GVTYDLISERFIKEFDRDMERLGLKLPTCQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI ++I L+Q +I    AY+A  ++ F      +Y   S R +++ + G R+   
Sbjct: 113 PKATEHIDEIISLVQTLIDKDFAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGARIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 173 ERKRHPMDFALWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +   N W+HNGF+N+   KMSKS GNF TI E+L+        +
Sbjct: 233 PHHENEIAQSEAATG-KPFVNYWLHNGFVNINSEKMSKSLGNFFTIKEVLDR-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
              V+R  +L  HYR PIDF+ Q LTEAE  L +  +   +                   
Sbjct: 285 DNEVLRFFLLSAHYRSPIDFSDQNLTEAEAGLERIYKALAAVEETLAAGNGCTGAPVDAS 344

Query: 347 ---------------IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHD---- 380
                          I      A+ +D NT  A+  +  L R       E+    D    
Sbjct: 345 SLNEAEGELFDKTTSISARFGEAMDDDFNTALAMAHVFDLVRCVNRVLSETAGASDNICS 404

Query: 381 ----LLPIFNASAHILGI---------EVCKEHLNKNISI---AIEKLVQERLILLKMKK 424
               +       A +LGI         E  K     N+ I    IE+L+ ER    K K 
Sbjct: 405 LCTLIKAEVAKIAGVLGIFSSKPASFLERLKSRKAGNLDIAVDEIERLIAERTAARKAKD 464

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           F  +D IR QL +K  +L D       Q+ T W  K
Sbjct: 465 FKRSDEIRDQLAAKNIVLLDS------QQGTTWSVK 494


>gi|154502843|ref|ZP_02039903.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
 gi|153796726|gb|EDN79146.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
          Length = 468

 Score =  581 bits (1499), Expect = e-164,   Method: Composition-based stats.
 Identities = 185/491 (37%), Positives = 254/491 (51%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ +   EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTMSKTKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E            I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKANEE------GVTAEEISKRYIEECKKDMEGMNVKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEIGGMIDMIQTLIDKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLQSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  +  +  W+HNGFLN++ RKMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEAANG-KDFSKYWLHNGFLNIDNRKMSKSLGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------- 342
           +   V+R  ML  HYR P++F+ + +  A+  L +    +                    
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLERIVTAAEHLKFLLEGAKTENMTEKEQ 344

Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                          A+ +D NT  AI A+  L +    N D          LL    A 
Sbjct: 345 AKIVKSQEFTRKFEKAMDDDFNTADAIAAVFDLVKFINTNTDGESSKEYLQNLLSQLVAL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V KE   + ++  IE L+ ER    K + F+ AD IR +L +KG ILED +  
Sbjct: 405 TDVLGIIVEKEQ--EMLADDIEALIAERQAARKERNFARADEIRDELLAKGIILEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKR 467


>gi|51894254|ref|YP_076945.1| cysteinyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|61216176|sp|Q67JP9|SYC_SYMTH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51857943|dbj|BAD42101.1| cysteinyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 471

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 172/493 (34%), Positives = 247/493 (50%), Gaps = 59/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYN L RK  +F  ++P  +R Y CGPTVYD+ HIGNAR  +VFD + R L Y   
Sbjct: 1   MGIRIYNDLTRKKEDFVPLEPGKVRFYNCGPTVYDYFHIGNARNFVVFDTVRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V+N TDIDD++I+RAR+          +S +  +  Q +  D   L        
Sbjct: 61  Q--VTFVQNFTDIDDRMIKRARER------GITVSELAEEMIQAYFADAGALGVRPADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT--RV 179
           PRAT  I + I +IQ +I  GHAY     ++ F  ++ P+YG  S + ++E   G   RV
Sbjct: 113 PRATALIDEQIAMIQQLIDKGHAYVVEGGDVYFRVTTSPDYGKLSHKNLEELVAGASERV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF LWK   P EP W +PWG GRPGWHIECSAM+  YLG   DIH GG D
Sbjct: 173 DPDDRKEHPFDFALWKGQKPGEPAWPAPWGPGRPGWHIECSAMARKYLGDTIDIHAGGED 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS      +  A  W+HN  L ++G KMSKS GNF T+ ++L       
Sbjct: 233 LTFPHHENEIAQSEAVTG-KPFARYWMHNAHLMIDGAKMSKSVGNFFTVRDIL------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------ 347
           + +   V+R+ +L  HYR  + F+ Q + +    L +   T  +   +            
Sbjct: 285 KRYDGEVVRMFLLSAHYRTQLSFSDQLMEDTRRALERLYNTVANLEHLAKTAPRAEMTAE 344

Query: 348 -----------DPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFN 386
                          ++A+ +D NT   +  +  L+RE                 L +  
Sbjct: 345 EQAVLAELSQARERFVAAMDDDFNTAEGLAVIFDLSRELNSRVKPGASAAFAEGGLALLR 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             A +LG+ + ++   + +   IE L+  R    K + F+ AD IR QL + G ILED  
Sbjct: 405 ELAGVLGL-LERKAQPQELDAEIEALIAARQEARKARNFAEADRIRDQLRAMGIILEDT- 462

Query: 447 NPDNGQRMTRWKQ 459
                 +  RW++
Sbjct: 463 -----PQGVRWRR 470


>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|109894912|sp|Q2Y7U5|SYC_NITMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 464

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 184/478 (38%), Positives = 255/478 (53%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L R+  EF  + P  +++YVCG TVYD+ H+G+AR M+VFD++ R  R      
Sbjct: 2   LKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRA--NRF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        ++I  +T++  Q   +D   L    P+ +PR
Sbjct: 60  DVTYVRNITDIDDKIIRRAQENK------ESIEALTARFIQAMEEDAAALGVEPPSWEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  MI +IQ ++    AY A N ++ +     P YG  S + +DE + G RV    
Sbjct: 114 ATRHVEDMIAMIQVLVDKKLAYPASNGDVYYAVHRFPGYGKLSGKSLDELRAGERVIVDP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           HK +P DF+LWK + P EP W+SPWG GRPGWHIECSAM  HYLG+ FDIHGGG DL FP
Sbjct: 174 HKNDPLDFVLWKAAKPGEPQWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ +   KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSEGAHG-HPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREILA-------HFQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----------AVL 352
             V+R  +L  HYR P+++   +L +A   L +         + D               
Sbjct: 286 PEVVRFFILRAHYRSPLNYADMQLEDAGRALDRLYTALKGIEVHDEVEIDWDDPYASRFR 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGI---------EVCKEHL 401
            A+ +D NT  A+  L  LA E  K      + +  A   +LG+         +      
Sbjct: 346 EAMNDDFNTPEALAVLFDLATEVNKTRLPRDIALMKALGGVLGLLQQDPWKYFQQADSED 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  +E+L+Q+RL+    K +  AD IRK+L     ILED      G   T W++
Sbjct: 406 PAFAPEKVEQLIQQRLVARANKDYREADRIRKELMEANIILED------GPHGTTWRR 457


>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 459

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 194/480 (40%), Positives = 271/480 (56%), Gaps = 45/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNT++R+   F  I P +I MYVCG TVYD+ H+G+AR MIVFDV+YR L +   
Sbjct: 1   MSLMLYNTIKREKEAFVPIRPGHIGMYVCGVTVYDYCHVGHARVMIVFDVIYRWLMHSGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YVRN TD+DDKII+RA +         AI  +T++    F  D   L CL PTH+
Sbjct: 61  D--VDYVRNFTDVDDKIIKRAAER------GIAIDALTNEMIDAFHADADALGCLRPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+  MI +IQ ++    AY +   ++++      +YG  S +KIDE + G+RV  
Sbjct: 113 PRATAHMDAMISMIQALMEKDMAYVSESGDVLYAVRGFSDYGQLSGKKIDELESGSRVDV 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK +   EP W SPWG+GRPGWHIECSAMS  +LG  FDIHGGG+DL 
Sbjct: 173 DQSKRDPLDFVLWKMAKADEPAWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLK 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+  A+     A  W+HNGF+N+   KMSKS GNF TI E+ E        
Sbjct: 233 FPHHENEIAQARAANGGG-FARYWLHNGFVNINAEKMSKSLGNFFTIREVTER------- 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPA 350
           +   V+R+ ML THYR P+DF+   L  A+  L +  +T+             + ++   
Sbjct: 285 YHPEVLRMFMLGTHYRSPLDFSDAALDVAKSGLDRLYKTAKRCQESGVTGAGGQALLPHH 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHL-- 401
             +A+ +D NT  A+  L   +R   K  +       L   F A + +LGI      +  
Sbjct: 345 FTTAMDDDFNTPEALAVLFDTSRALNKGLNEAQDVTALAGQFTAMSALLGIVQQDTAIWF 404

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 + AIE L++ERL   K + F+ AD IR +L ++G +LED  +       T WK+
Sbjct: 405 QSGDVDAAAIEALIEERLQARKNRDFARADAIRNELSAQGIVLEDSAS------GTTWKK 458


>gi|332800102|ref|YP_004461601.1| cysteinyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697837|gb|AEE92294.1| cysteinyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 466

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 182/488 (37%), Positives = 257/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF  ++ ++++MY CGPTVYDF HIGNAR  I FD++   L++   + 
Sbjct: 1   MLIYNTLTRKKEEFVPLEDNHVKMYTCGPTVYDFFHIGNARVFITFDMVRNYLKFRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I+RA  E         +  +  +   ++  D   L        PR
Sbjct: 60  -VTFVQNFTDIDDKMIKRANDE------GITVKELGERFIGEYFHDADTLGITRADVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I LI+ ++  G+AYE N ++ + TS   +YG  S + IDE K G R+     
Sbjct: 113 ATEHIDEIIDLIKILVEKGYAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEPGEQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK   P EP W+SPWG+GRPGWHIECS M+  YLG+  DIHGGG DLIFPH
Sbjct: 173 KKDPIDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  ++H G+LN+  +KMSKS GNF T+ ++L+T       +  
Sbjct: 233 HENEIAQSEAATG-KPFARFFMHVGYLNINNQKMSKSLGNFFTVRDILKT-------YDP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
            V+R  ML +HYR PI+F+   + +A+  L +      S   ++                
Sbjct: 285 EVLRFFMLSSHYRNPINFSQDLMEQAKNSLERLHNAIYSMEHLESVAQDKDLAEDDEKYL 344

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     + A+ +D NT  AI +L  + RE               D          +
Sbjct: 345 NKLETNKNEFIKAMDDDFNTADAIASLFNIVREYNMFVDENSPKKLIVDTKDAILTLGSV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   K      +   IE+ + ER    K K ++ AD IR  L+++G ILED       
Sbjct: 405 LGL-FRKFMEKTLLDEEIEQKIIEREQARKEKNYALADKIRDDLKAQGIILEDT------ 457

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 458 PAGVRWKR 465


>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [Clostridium sticklandii]
          Length = 466

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 182/487 (37%), Positives = 267/487 (54%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  ++ + I+MYVCGPTVY+F HIGNARP ++FD     + Y   E 
Sbjct: 1   MKIYNTLTRQKETFIPLEENKIKMYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII+RA +E        +   +  K   ++ KD   L     T  PR
Sbjct: 60  -VTYVQNFTDVDDKIIKRANEE------GISPIEVAEKYIAEYFKDADALGIKRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I  +I  I+++I  G AYE N ++ F++ +   YG  S++ ++E  +G R+     
Sbjct: 113 VTENIENIITFIEDLISKGFAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK     E GW+SPWG GRPGWHIECS MS+ YLG   DIH GG DLIFPH
Sbjct: 173 KKHPIDFALWKAKKEGEIGWQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+HNG++N++ +KMSKS GNF T+ ++L         +  
Sbjct: 233 HENEIAQSEARSG-KQFARYWMHNGYINVDNQKMSKSLGNFFTVRDILS-------EFSG 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------QTST 342
            VIR  +L  HYR P++F+ + + +A+  + +                        +  +
Sbjct: 285 QVIRFFLLSAHYRNPVNFSKELILQAKAGMERLANSKERLVFTISHAKGQMNESELELVS 344

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHIL 392
           +        + A+ +D+NT  AI  + +LAR S  N             L +FN    +L
Sbjct: 345 ALENHRDRFIEAMDDDINTADAISIIFELARFSNTNVTENSSLEWAEKNLSLFNELTGVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            I +  E  + N +  IEKL+++R+   K K F+ AD IR +L+S G  +ED +      
Sbjct: 405 NI-IKAEDTDSNDNEQIEKLIKDRVEAKKNKDFALADAIRDELKSMGIEIEDTR------ 457

Query: 453 RMTRWKQ 459
           + T+WK+
Sbjct: 458 QGTKWKK 464


>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
 gi|158448209|gb|EDP25204.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
          Length = 463

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 196/486 (40%), Positives = 257/486 (52%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL R+  EF+ I+   + +YVCGPTVYD+ HIGNARPMIVFD L R L Y   E 
Sbjct: 1   MKILNTLTRRKEEFKPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA  E          S+I+ +   +  KD   L     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANAE------GVDASVISERYIAEVKKDMAALNVREATTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  IP MI +++ +I   +AYE N  + F T    +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIPDMIEMVKTLIEKDYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W SPWG GRPGWH+ECS MS  Y+G V DIH GG DLI
Sbjct: 173 IDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFL +   KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGTE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIIDPAVL-- 352
           +P  VIR  ML  HYR P++F+ + +  ++  L +               G +D +V   
Sbjct: 285 YPLQVIRFFMLSAHYRSPLNFSAELVEASKNGLERILTAVDRLKSINGIDGDVDKSVADE 344

Query: 353 ---------SALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILG 393
                     A+ +DLNT  AI  + +L + +  N            +L        ILG
Sbjct: 345 MDAFVKKYEDAMDDDLNTADAISVIFELVKYANVNVTEESSKATVELVLNTIEKLCDILG 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           I    E   + +   IE L++ER    K K F+ AD IR QL S G ILED +       
Sbjct: 405 I--ITEKKEEILDSDIEALIEERQAARKAKNFARADEIRDQLSSMGIILEDTR------E 456

Query: 454 MTRWKQ 459
             +WK+
Sbjct: 457 GVKWKR 462


>gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 699

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 287

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 288 TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 341

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 342 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 401

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 402 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 461

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 462 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 521

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 522 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 574

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 575 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 634

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 635 DPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 690

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 691 --AGGTTWRR 698


>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 487

 Score =  581 bits (1498), Expect = e-164,   Method: Composition-based stats.
 Identities = 178/489 (36%), Positives = 259/489 (52%), Gaps = 51/489 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I +YNTL R+  EF  ++P N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR + 
Sbjct: 14  NMPITLYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               +TYVRNITDIDDKII RA +        + I  +T++      +D+  L  L P  
Sbjct: 74  Y--PLTYVRNITDIDDKIIARANEN------GETIGELTARFIAAMNEDSDALGVLRPDI 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +P+AT HI QMI +I++++ +G AY A N ++ +       YG  S + +D+ + G RV 
Sbjct: 126 EPKATEHIGQMIAMIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSGKSLDDLRAGERVD 185

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK + P EP WESPWG GRPGWHIECSAM     G+ FDIHGGG DL
Sbjct: 186 VDANKRDPLDFVLWKAAKPGEPSWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADL 245

Query: 241 IFPHHENEIAQSCCADRI--------------EKTANIWIHNGFLNLEGRKMSKSNGNFI 286
            FPHHENEIAQSC A                       W+HNGF+ ++  KMSKS GNF 
Sbjct: 246 QFPHHENEIAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFF 305

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           TI ++L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +   
Sbjct: 306 TIRDVL-------KKYAPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQA 358

Query: 347 IDPA-----------VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILG 393
            + A             +A+ +D NT  A+  L +LA E+ K  + +L     A    LG
Sbjct: 359 AEFAVREDANDYTRRFFAAMDDDFNTAEAMSVLFELANEANKTGSAELAGCLKALGGTLG 418

Query: 394 IEVCK--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +                   +  IE L+ +R    + K ++ +D IR  L     +L+D 
Sbjct: 419 LLQDDPQHFLQSGGEEGGLSADEIEALITQRKTARETKNWAESDRIRDLLAEHKILLKDG 478

Query: 446 KNPDNGQRM 454
            +     R 
Sbjct: 479 ADGTTWTRG 487


>gi|209548641|ref|YP_002280558.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|226710847|sp|B5ZWB3|SYC_RHILW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|209534397|gb|ACI54332.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 463

 Score =  581 bits (1498), Expect = e-163,   Method: Composition-based stats.
 Identities = 266/458 (58%), Positives = 338/458 (73%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++K+YNTL R+ T F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5   PELKLYNTLTREETVFAPIDPDNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTY RNITD+DDKI  RA ++HP +P+N AI  +T +   QF  D   L CL P+ +
Sbjct: 65  EDHVTYARNITDVDDKINARALRDHPGLPLNQAIRAVTERTETQFHADVAELGCLEPSVE 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT++I +M  +I+ +I +GHAY A  E++FDT S+ +YG  S+R +DEQ+ G R+   
Sbjct: 125 PRATDNIVEMTEIIEKLIGNGHAYVAAGEVLFDTKSMADYGQLSKRPLDEQQAGARIAVD 184

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HKKN  DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG VFDIHGGGLDLIF
Sbjct: 185 AHKKNSGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGDVFDIHGGGLDLIF 244

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   E  ANIW+HNGFL +EGRKMSKS GNF+TI++LL T+ FGGR W
Sbjct: 245 PHHENEIAQSRCAHGTEVMANIWMHNGFLQVEGRKMSKSEGNFVTIHDLLHTQIFGGRKW 304

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           P  V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T       D  VL+AL ++LNTV
Sbjct: 305 PGEVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDAEPDETVLNALADNLNTV 364

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
           +A+QALH LA+ +  +      F A+A +LG+   K  +++ ++ A++ LV  RL +LK 
Sbjct: 365 AAVQALHALAQAAHTDPAAGARFAATAALLGLLPKKAEIDEAVAAAVDALVAMRLEMLKA 424

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 425 KNFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 462


>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|187629798|sp|A4XHE2|SYC_CALS8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 465

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 182/480 (37%), Positives = 252/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E         +  +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKE------GITVFELAERFIQEYYKDADRLNVRRATKSPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I++   G RV     
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARVDPSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTSTS 343
             +RL ML  HYR+P++F++  + +AE+ L +                       +   +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
              +    + A+ +DLNT  A   L ++ RE   + +            I      ILGI
Sbjct: 345 IEELKAKFIDAMEDDLNTAEATGYLFEMVREINTHANSCSKETLTFAKDILKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   + I   I +LV++R    K K F  AD IR +L+S G+I+ D       +R+
Sbjct: 405 LEQYSAKEEAIPQEILELVEKRNQARKAKNFLEADRIRDELKSLGYIVLDTPQGTKVERI 464


>gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 587

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 118 IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 175

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 176 TYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEPKAT 229

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 230 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 289

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 290 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 349

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 350 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 409

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 410 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 462

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                         A+ +D +TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 463 PSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQR 522

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 523 DPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 578

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 579 --AGGTTWRR 586


>gi|170721588|ref|YP_001749276.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229558806|sp|B1J805|SYC_PSEPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169759591|gb|ACA72907.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 460

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 177/478 (37%), Positives = 252/478 (52%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    E 
Sbjct: 2   LTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPYWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDV-------YH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++           +            A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEEFVERFSVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D  T  A   L  L RE  +  D        L         +LG+   +         
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDPDAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEALIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GATTWR 457


>gi|316934832|ref|YP_004109814.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315602546|gb|ADU45081.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 463

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 226/468 (48%), Positives = 305/468 (65%), Gaps = 20/468 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL ++   F  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MELRLYDTLTKEKRTFAPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +
Sbjct: 61  EGHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
           PRAT HI +M  +I  ++  G AY   + ++F   ++       P YGS + R +DE   
Sbjct: 121 PRATEHIGEMRSIIDKLVAGGFAYVEQDHVLFSPGAMNAANGVLPRYGSLANRSLDEMIA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
           G RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHENE+AQSCCA    + A  W+HNGFL +EG KMSKS GNFITI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTSRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELL 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAV 351
            T+KFGGRSW    +RLAML THYR+PID+TV  L EAE  +  W + T  +       V
Sbjct: 301 ATEKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALHEAEKAILDWSEFTKDATPARCDEV 360

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIE 410
           ++AL +DLNT   I  LH L R   +  +LL        +LGI  V ++ ++  I +   
Sbjct: 361 IAALTDDLNTPKMIAELHALRRAG-RAQELLGAL----QLLGIGRVFRQSID--IGVNAR 413

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            L++ R      K +  +D IR +L + G +L+D K+ +NG+ +T W+
Sbjct: 414 ALIEARTAARANKDWKESDRIRDELAAMGVVLKDGKD-ENGKPVTTWE 460


>gi|157690877|ref|YP_001485339.1| cysteinyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|187629792|sp|A8F962|SYC_BACP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157679635|gb|ABV60779.1| cysteine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 466

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 169/489 (34%), Positives = 257/489 (52%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL RK  EF  ++P  ++MYVCGPTVY++ HIGNARP IV+D + + L Y   
Sbjct: 1   MTINIYNTLTRKKEEFVPLEPGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRKYLEYSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I+ A +      + + +  I  +  Q + +D + L C      
Sbjct: 61  D--VNFVSNFTDVDDKLIKAANE------LGEDVPTIADRFIQAYFEDVSALGCKKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  I+ +I  G+AYEA+ ++ + T S   YG  S + IDE K G R+   
Sbjct: 113 PRVTENMDDIIAFIETLIEKGYAYEADGDVYYSTRSFEGYGKLSHQSIDELKTGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKRDALDFALWKAAKNQEISWDSPWGEGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+E  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWMHNGYINIENEKMSKSLGNFVLVHDIV-------KEQ 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI++++  L   +   ++   +  +                   
Sbjct: 285 DPDVLRFFMLSVHYRHPINYSMDLLESTKSAFNRLKTSYANLHHRLESSTNITEDNAKWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
                     +S + +D NT +AI  L +LA+++    +            + +F     
Sbjct: 345 AKVEEQRATFISEMNDDFNTANAISVLFELAKQANYYMENDHTSEEVIKAFIGLFQEITS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG  + ++H    +   +E L+++R    + + F+ +D IR QL+S   +LED      
Sbjct: 405 VLGFSLEEKHT---LEKEVEALIEQRNEARRNRDFALSDQIRDQLKSMNIVLEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -PQGTRWKR 464


>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 474

 Score =  581 bits (1497), Expect = e-163,   Method: Composition-based stats.
 Identities = 180/493 (36%), Positives = 252/493 (51%), Gaps = 59/493 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN L RK   F  +    +  Y CGPTVYD+ HIGNARP IVFDVL R L +   E 
Sbjct: 3   LALYNDLTRKKEPFVPLHEGKVAFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEFRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I RA ++         +  +  K    + +D   L     +  PR
Sbjct: 62  -VTFVQNFTDIDDKMIARANRD------GVTVQQLAEKTIADYYEDADALGIKRASFYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IP++I +IQ II +GHAY A+  + FD  S P YG  S + +D+ + G R+     
Sbjct: 115 ATEYIPKIIAMIQRIIDNGHAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARIEVDDV 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK   P EP WESPWG GRPGWHIECSAMS+  LG   DIH GG+DL+FPH
Sbjct: 175 KRSPLDFVLWKPQKPGEPAWESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGIDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +     W+HN ++ +   KMSKS GNF+T            + +P 
Sbjct: 235 HENEIAQTEAATG-KPFVKYWLHNEYILINAEKMSKSLGNFLTARAAR-------QKFPP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------------TST 342
             IR+ ML  HYR PI+FT + L +A   + +                            
Sbjct: 287 LAIRMFMLGAHYRSPINFTPEGLEQAAAAVERLRNCWSDLQFAKGGRLGETSAAGAALMA 346

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------------NHDLLPIFNA 387
           +         +A+ +D NT +AI  + +   E  K                       ++
Sbjct: 347 ALDTFRADFTAAMDDDFNTAAAIGVIFEAVTEVNKYLKGNEKLDPAAVAAAEKFFGDIDS 406

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I+GIE  K+  + + +  IE L+ ER    K + F  +D IR +L ++G ILED   
Sbjct: 407 VMGIIGIEQEKKEESGDEAARIEPLIAERNAARKARDFKRSDAIRDELAAQGIILEDT-- 464

Query: 448 PDNGQRMTRWKQK 460
                + T+WK+K
Sbjct: 465 ----PQGTKWKKK 473


>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 699

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 287

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 288 TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 341

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 342 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 401

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 402 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 461

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 462 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 521

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 522 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 574

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                         A+ +D +TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 575 PSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 634

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 635 DPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN---- 690

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 691 --AGGTTWRR 698


>gi|167033877|ref|YP_001669108.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|187629853|sp|B0KUU0|SYC_PSEPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166860365|gb|ABY98772.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 460

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 252/478 (52%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR    + 
Sbjct: 2   LTIYNTLSKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        +    +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRANEN------GETFDALTARMIDAMHEDERRLNILPPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   ++ AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +A+  L ++           +            A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSMAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
            +D  T  A   L  L RE  +  D        L         +LG+   +         
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRDSDLEAAAGLAGRLRELGDVLGVLQLEADDFLRAGA 405

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+Q RL     K ++ +D IR QL + G +LED K        T W+
Sbjct: 406 EGKVDAAEVEGLIQARLQARTDKNWAESDRIRDQLTAMGVVLEDSK------GATTWR 457


>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 472

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 200/486 (41%), Positives = 266/486 (54%), Gaps = 53/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +  EF+ ++   ++MYVCGPTVYD AHIG+AR  +VFDV+ R L Y     
Sbjct: 2   IKVTNTLTERKEEFKPLEGKTVKMYVCGPTVYDHAHIGHARSAVVFDVIRRWLEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII+R+++E            ++ K    + +D   L    PT++P+
Sbjct: 60  RVIFVRNYTDVDDKIIKRSKEEGIPWY------EVSKKYIASYEEDMEALNVKEPTYKPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I +I  +I  GHAYEA+ ++ F   S P YG  S+RK +E   G RV     
Sbjct: 114 VTEHIREIIEMIDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKTEELLAGARVEPGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+S   EPGWESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 174 KKNPLDFALWKKSKEGEPGWESPWGVGRPGWHIECSAMSMKYLGETIDIHGGGFDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  WIHNGF+ +   KMSKS GNF TI E+L       + +  
Sbjct: 234 HENEIAQSESYTG-KTFARYWIHNGFVMVNREKMSKSLGNFFTIKEIL-------KQFSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
             +RL +L THYR PIDFTV+RL EAE  L +      S   ++                
Sbjct: 286 DTLRLFLLSTHYRSPIDFTVERLKEAERALKRLTTFIESVKAVEKLPEEGEKGEPIDVES 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------PIFNA------S 388
                 +A+ +D NT  A+ AL++L + +    D               + +A      +
Sbjct: 346 ARREFEAAMDDDFNTAKALGALYELVKRANTLKDKALKRQKITPSERESLVDAARFTENA 405

Query: 389 AHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              LG ++ +E     +  A IE L+Q R  L K K+F  AD IR +L+  G  LED   
Sbjct: 406 LKTLGFKLEREQSEGGLEEALIELLIQVRGELRKKKEFQLADLIRDRLKELGITLEDLPT 465

Query: 448 PDNGQR 453
               +R
Sbjct: 466 GTVYRR 471


>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|61216254|sp|Q747A2|SYC_GEOSL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 481

 Score =  580 bits (1496), Expect = e-163,   Method: Composition-based stats.
 Identities = 194/501 (38%), Positives = 264/501 (52%), Gaps = 67/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     +F  ++P  ++MYVCG TVYD  HIG+AR  +VFD++YR LR+   E 
Sbjct: 3   LRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +E     +      I+ +   +F +D   L    PT+QP+
Sbjct: 62  -VTYVRNYTDVDDKIINRANKEGVPFNV------ISERFIAEFDRDMAALGLDLPTYQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +I+ ++  G AY A+ ++ F   +   Y   S+R ++E + G R+     
Sbjct: 115 ATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  WIHNGF+N+   KMSKS GNF TI E+LE       S+ A
Sbjct: 235 HENEIAQSEAANG-KPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLE-------SYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA--- 350
            V+R  +L  HYR PIDF+ Q L EA   L +                T  G ID     
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGRIDEELAE 346

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHI 391
                      A+ +D NT  A+  +  L R   +                   +    +
Sbjct: 347 KAAGLPTRFREAMDDDFNTAQALGYVFDLVRAVNRVLAEGEIDRAVLASAREAIDRVGAV 406

Query: 392 LG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           LG            ++  K       +  IE+L++ER    K + F  AD IR  L ++G
Sbjct: 407 LGLFTSEPGAFVERLKSRKAAALPIEAAEIERLIEERNAARKARDFRRADEIRDTLAAQG 466

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
            +L D        + T WK K
Sbjct: 467 ILLLDS------AQGTTWKVK 481


>gi|294788619|ref|ZP_06753861.1| cysteine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294483496|gb|EFG31181.1| cysteine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 475

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 178/489 (36%), Positives = 259/489 (52%), Gaps = 54/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ IDP N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +    
Sbjct: 2   LYLYNTLTRQKERFEPIDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA Q        + I  +T +  Q   +D+  L  L P  +P+
Sbjct: 60  PLTYVRNITDIDDKIIARANQN------GETIQQLTERFIQAMNEDSQALGVLRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI QMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATEHIAQMIQMIEKLIENGKAYPAENGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVDG 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W SPWG GRPGWHIECSAM     G+ FDIHGGG DL FP
Sbjct: 174 FKRDPLDFVLWKAAKPEEPSWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENEIAQSC A+                 +     W+HNGF+ ++  KMSKS GNF TI
Sbjct: 234 HHENEIAQSCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFTI 293

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
            ++L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +   I+
Sbjct: 294 RDVL-------KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPIE 346

Query: 349 -------------PAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLPIFNASAHILG 393
                            +A+ +D  T  A+  L ++A E+ KN   +L         +LG
Sbjct: 347 FKLDSNGNNNDYTHKFFNAMNDDFGTAEAVSVLFEIANEANKNDSAELSGCLKTLGGVLG 406

Query: 394 IEVCKEH--------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +              ++   +  I KL+ +R I  + K ++ +D IR  L      ++D 
Sbjct: 407 LLQDNPEQFLQGGNNVDGLSADEINKLISQRKIARETKNWAESDRIRDILAEHKIQVKDS 466

Query: 446 KNPDNGQRM 454
            +     R 
Sbjct: 467 ADGTTWTRG 475


>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|109894904|sp|Q2SK40|SYC_HAHCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 467

 Score =  580 bits (1495), Expect = e-163,   Method: Composition-based stats.
 Identities = 175/481 (36%), Positives = 255/481 (53%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY++L ++  EF+ I    + +YVCG TVYD+ H+G+AR ++ FD++ R LR    + 
Sbjct: 2   LKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI+ RAR         +++  +T++      +D   L  L+PT +PR
Sbjct: 61  -VNYVRNITDVDDKILNRARDN------GESVDALTARFIDAMHEDERALGVLSPTSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I +IQ ++  G+AY  +N ++ +      +YG  S++K+DE + G R+    
Sbjct: 114 ATGHIDEIIAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSKQKLDEIRAGARIEVDA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF+LWK + P E  W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 174 EKRSPADFVLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+H G + +   KMSKS GNF TI E+L+        +P
Sbjct: 234 HHENEIAQSEAATGCK-YVNYWMHAGAVRVNKEKMSKSLGNFFTIREILD-------KYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------GIIDP 349
           A V+R  +  +HYR  ID++   L EA   L +   +                  G    
Sbjct: 286 AEVVRYFLASSHYRSAIDYSDVALEEARSGLERLYNSIRELYGELGAVSMDEPLVGEYRE 345

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK--- 398
               A+ +D NT SA+  L  +A+           +   L       A +LG+       
Sbjct: 346 RFHQAMDDDFNTSSAVAVLFDMAKAVNVAKKEDRTRALSLAKGMVDLAEVLGLLQADPES 405

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E +       IE  + +R      K F+ +D IR  L+ KG +L D +   + Q
Sbjct: 406 LMQGEGEEVGGLSVAEIEDFIAQRNAARANKDFAESDRIRDLLKEKGVLLNDSREGTSWQ 465

Query: 453 R 453
           R
Sbjct: 466 R 466


>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 472

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 170/492 (34%), Positives = 245/492 (49%), Gaps = 56/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN L RK   F  +    +  Y CGPTVYDF HIGNARP IVFDV  R L     
Sbjct: 1   MSLMLYNDLTRKKEPFIPLKEGEVGFYSCGPTVYDFFHIGNARPFIVFDVFRRYLEDIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V+N TDIDDK+I RA +E         +  +     +++ +D   L        
Sbjct: 61  K--VVFVQNFTDIDDKMINRANEE------GITVKELADAFIKEYFEDADALGVRRADIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+H+ +++ ++Q +I  GHAY  + ++ F   S P YG  S++ I++ + G+R+   
Sbjct: 113 PRATDHMKEIVEVVQTLIDKGHAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK   P EP WESPWG GRPGWHIECS MS+ YLG  FDIH GG DLIF
Sbjct: 173 EQKRHPLDFALWKAQKPGEPAWESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQ+  A  + +    W+HNG+L ++  KMSKS GNF+T+           + +
Sbjct: 233 PHHENEVAQAEAATGM-QFVRFWLHNGYLLIDKEKMSKSLGNFLTVRNAR-------KKY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
               IR  ML  HYR PI+F+ + L +A   + +     T                    
Sbjct: 285 SPLAIRYFMLSAHYRSPINFSEEGLNQATGAVERLRNCWTDLEYALQSREQKEKDDTEAF 344

Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
                  +      + +D NT  A+ ++ ++ R                       F   
Sbjct: 345 LSEIKQAETKFYEEMNDDFNTAGALGSVFEVVRLINTYLKDNSSIDFKVCKAAQTFFTKI 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I+GI   +    +  +  IE +++ER    K + F+ +D IR QL  KG ILED    
Sbjct: 405 DGIMGIMGLESEKEELDTSEIESMIEERTAARKARDFAKSDAIRDQLAEKGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
                 T+WK++
Sbjct: 462 ---PEGTKWKKQ 470


>gi|217976332|ref|YP_002360479.1| cysteinyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|254781685|sp|B8EMY2|SYC_METSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217501708|gb|ACK49117.1| cysteinyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 449

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 218/461 (47%), Positives = 291/461 (63%), Gaps = 14/461 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ YNTL R+   F  IDP+++R+Y CGPTVYD  HIGN R +IVFD+L+RLLR+ YG
Sbjct: 1   MSLRFYNTLTRQKEAFTPIDPADVRVYACGPTVYDHLHIGNGRMLIVFDLLFRLLRHVYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YVRNITD+DDKI  RA +          I ++T + T  F +D   L CL PT +
Sbjct: 61  KDHVRYVRNITDVDDKINARAAER------GVDIRVLTDEMTAIFHEDAAGLGCLPPTVE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ +MI +IQ +I  G AY A   ++FD  ++P+YG+ S+R +D+   G RV   
Sbjct: 115 PRATEHMAEMIAIIQKLIDKGAAYIAEGHVLFDVPAMPDYGALSKRPLDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+ P DF+LWK + P EPGWESPWGRGRPGWHIECSAMS  +LG+VFDIHGGG+DL+F
Sbjct: 175 PYKRGPMDFVLWKPAAPSEPGWESPWGRGRPGWHIECSAMSWRHLGEVFDIHGGGIDLVF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+ CA      A++W+HNG L +EG KMSKS GNF+TI+ELL +  FGGR W
Sbjct: 235 PHHENEIAQTRCAFGHSVMAHVWMHNGHLQVEGEKMSKSLGNFVTIHELLNSDSFGGRKW 294

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--TSKGIIDPAVLSALYNDLN 360
           P  V+RLAML THYR+PIDFTV+ L EAE  LS+W   +        D   + AL +DLN
Sbjct: 295 PGAVLRLAMLRTHYRQPIDFTVKALEEAERTLSEWRHAAEGAEPEAPDANFIDALSDDLN 354

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T  AI  LH L +       L  +      +  +   +  L ++    I  L+ ER    
Sbjct: 355 TPRAISELHAL-KAKRPGALLGGLALLGVDLADLGEEERALPRSAFEQIMALIAEREAAR 413

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           + K ++ +D +R +L + G +L+D K        T W+ KP
Sbjct: 414 QHKNWAESDRLRDKLAAMGVVLKDNKGGA-----TSWELKP 449


>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|187629791|sp|A7GK01|SYC_BACCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 465

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 175/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++   ++MYVCGPTVY++ HIGNARP +VFD + R L +   
Sbjct: 1   MTIHIYNTLTRQKEEFIPLEEKKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEHKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIAERFIEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ + T     YG  S + I++ + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYYRTKEFEGYGKLSHQAIEDLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLSF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KPFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +   T                      
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTTYRNLKHRIESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A  +A+ +D NT +AI  L+ LA  + +               +        
Sbjct: 345 AEMKEFQSAFEAAMDDDFNTANAITELYNLANHANQYLLEEHTSKVVIEAYINQLEMLFR 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+   KE L   +   IE L+Q+R+   K + F+ AD IR  L+ +  ILED      
Sbjct: 405 ILGLVFTKEEL---LDKEIEALIQKRIEARKNRDFALADKIRDDLKERNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
           meningitidis WUE 2594]
          Length = 699

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 287

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 288 TYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEPKAT 341

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 342 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 401

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 402 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 461

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 462 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 521

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 522 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 574

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
                         A+ +D +TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 575 PSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQR 634

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  I+ L+  R      K ++ +D IR  L     ILED     
Sbjct: 635 DPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 690

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 691 --AGGTTWRR 698


>gi|315127193|ref|YP_004069196.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015707|gb|ADT69045.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 459

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 174/479 (36%), Positives = 262/479 (54%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+   + 
Sbjct: 2   VQIYNTLTRQKEEFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +        +AI+ +T + T+   +D   L  L P  +P 
Sbjct: 61  -LKYVRNITDVDDKIIKRANEN------GEAINDLTVRMTKAMHEDFDSLNMLRPDIEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +++ +I  GHAY A + +++FD S+   YG+ S++ +   + G+RV    
Sbjct: 114 VTGHMDEIIAMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FP
Sbjct: 174 DKDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   +  N WIH G + +   KMSKS  NF T+ E+L       + + 
Sbjct: 234 HHENEIAQSCCANNG-QYVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KQYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +          ++              A
Sbjct: 286 AESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRGVEPVECELEGNEYVAKFRKA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEH 400
           + +D N+  A+  + ++A+E  +  D        L  I  +   ILGI         +  
Sbjct: 346 MNDDFNSPEALPVVFEVAKELNRVKDSDSEKAGHLAFILRSLGEILGIAQQAPEAFLQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            N +    IE L+ +R      K +++AD  R  L + G +LED          T W++
Sbjct: 406 QNDDEVAEIEALIVKRNDARASKNWAAADEARDALNALGVVLEDS------AGKTTWRK 458


>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 699

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--LL 287

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 288 TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 341

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 342 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 401

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 402 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 461

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 462 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 521

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 522 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 574

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                         A+ +D +TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 575 PSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 634

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 635 DPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN---- 690

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 691 --AGGTTWRR 698


>gi|332306241|ref|YP_004434092.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173570|gb|AEE22824.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 464

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 253/484 (52%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  +  S + +YVCG TVYD +H+G+AR  + FD++ R LR+   E 
Sbjct: 2   LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        +    +T +       D   +  L P  +PR
Sbjct: 61  -VNYVRNITDIDDKIIQRANEN------GETTRALTERTIAMMHDDFAAINLLEPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+P++I +I+ +I  GHAY+A + +++FD SS  +YG  S++ +++  MG+RV    
Sbjct: 114 VTTHMPEIIAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK   P EP W SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DLIFP
Sbjct: 174 DKDDPMDFVLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H G + ++  KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCAYDT-PYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVL-------KQHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLS 353
           A  +R  ++  HYR  + ++   +T+A   L +            Q     G        
Sbjct: 286 AETLRYFLMSAHYRSQLSYSEDNITQARSALERLYTALRDVNANIQVDMQSGDYLARFDK 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-----------DLLPIFNASAHILGIE------- 395
           A+ +D NT  A+  L  +A+E  K             DL  I      +LGI        
Sbjct: 346 AMDDDFNTPEAMAVLFDVAKELNKAKAEEQSGHSRASDLAGILLNLGKVLGILQRSPSEY 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +  +  + +    IE L++ R      K + +AD  R  L     ILED      G   T
Sbjct: 406 LQGDQQDADEVAEIEALIKARNDARAAKDWPAADAARDGLNVLNIILED------GPSGT 459

Query: 456 RWKQ 459
            W++
Sbjct: 460 TWRK 463


>gi|104781222|ref|YP_607720.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079208|sp|Q1IBP9|SYC_PSEE4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|95110209|emb|CAK14916.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 460

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 256/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D +N+RMYVCG TVYD+ H+G+ R M+ FD++ R LR      
Sbjct: 2   LTIYNTLSKTKETFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRKSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        ++   +T++      +D  RL+ L P  +PR
Sbjct: 60  ALTYVRNITDIDDKIINRANEN------GESFDALTARMIDAMHEDERRLSILKPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRKKIEDLRIGARIEVGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKQDPLDFVLWKGAKPGEPFWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++L+        + 
Sbjct: 234 HHENEIAQSEAATG-KPYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSAL 355
             V+R  ++ +HYR  I+++   L +++  L ++           +            A+
Sbjct: 286 PEVVRYLLVASHYRSAINYSEDSLRDSKGALERFYHALRGLPRVAAKGGEAFVERFTVAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHL 401
            +D  T  A   L  L RE  +  +        L         +LG+      E  +   
Sbjct: 346 NDDFGTPEACAVLFDLVREINRLRESDVEAAAGLAGRLRELGDVLGVLQLDADEFLRAGA 405

Query: 402 NKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  A +E L+Q RL     K ++ +D IR Q+ + G +LED K        T W+
Sbjct: 406 EGKVDAAQVEALIQARLQARADKNWAESDRIRDQITAMGVVLEDGK------GGTTWR 457


>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 476

 Score =  579 bits (1494), Expect = e-163,   Method: Composition-based stats.
 Identities = 187/495 (37%), Positives = 250/495 (50%), Gaps = 60/495 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL ++  EF+ I    +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +   
Sbjct: 1   MSLKVYNTLTKRKEEFKPIREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TDIDDKII RAR+        +    +  K  + F++D   L        
Sbjct: 61  --TVLMVMNFTDIDDKIIRRARE------TGEDPKELAEKFIKVFLEDMNALKVKPADIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HI  +I  I+ +   G+AYE  + + F+      YG  S  KI+E + G RV   
Sbjct: 113 PRVTEHIGDIIDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKIEELRKGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      E     W+H GF+ ++G KMSKS GNF+T+ ELL       + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVRYWLHTGFVMVKGEKMSKSLGNFVTVRELL-------QRY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------- 341
              VIR  +L  HYR P+D++ + L  A+  L +   T                      
Sbjct: 285 SPEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMERAELAYTWDEDDY 344

Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
               +          A+ +D NT  A++A+ +++    K                L  F 
Sbjct: 345 EVYEAIKNARKKFYEAMDDDFNTAEALKAVFEVSNAINKYLTEKERPKEAILRKALEFFK 404

Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             + I GI  +  KE   +     I+ LV  R  L K K+F  AD IR++L   G  LED
Sbjct: 405 VVSEIFGIFEDYFKEEKREIEEELIKVLVDVRSQLRKEKRFDLADKIREELRRLGIQLED 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + T WK+
Sbjct: 465 R------GQETVWKR 473


>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 699

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 230 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 287

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 288 TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 341

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 342 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 401

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 402 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 461

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 462 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 521

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 522 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 574

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 575 LSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 634

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 635 DPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN---- 690

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 691 --AGGTTWRR 698


>gi|251799666|ref|YP_003014397.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
 gi|247547292|gb|ACT04311.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
          Length = 470

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 176/491 (35%), Positives = 251/491 (51%), Gaps = 56/491 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R    F   +P  ++MYVCGPTVYD+ HIGNARP+I FDV+ R L Y   
Sbjct: 1   MNVQIYNTLTRSKEAFVPQEPGKVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLEYAGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+ N TD+DDK+I++A Q      +   +  +  K    F +D   L     T  
Sbjct: 61  D--VNYIVNFTDVDDKLIKKAEQ------LGLTVPEVADKFINAFNEDIASLGVHKATLN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HIP +I  IQ ++  G+AY +  ++ + TS    YG  S + ++E + G R+   
Sbjct: 113 PRVTEHIPSIIAFIQGLVDTGYAYASEGDVYYRTSKFEEYGKLSHQNLEELQFGIRIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK   P E  WESPWG GRPGWHIECSAM+  YLG   DIHGGG DL F
Sbjct: 173 ERKENPQDFVLWKGVKPGEINWESPWGPGRPGWHIECSAMAREYLGDTLDIHGGGHDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE E+AQS      ++ AN W+HNG++++   KMSKS GN IT+NEL++  K      
Sbjct: 233 PHHECEVAQSEALTG-KQLANYWMHNGYIHINNEKMSKSLGNGITVNELVKRVK------ 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
               IR  +L THYR P++FT + + +AE  + +    + +                   
Sbjct: 286 -PAAIRYFILSTHYRSPLNFTDETIAQAENSVDRIANCAANLKHRLSTFDGQSEGAAAGE 344

Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                  +     + + +D NT  AI A+ +L  E+ +  +           LL      
Sbjct: 345 LGDRIAQLKAQFEAKMGDDFNTPDAITAVFELVTEANQYMNRADASSEGIAALLAALEQM 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+        + +   I+ L+ ER      K ++ AD IR  L  KG  LED    
Sbjct: 405 NTVLGLLPEAGTDAELLDDEIDALIVERTEARAAKNWARADEIRNLLTEKGIALEDT--- 461

Query: 449 DNGQRMTRWKQ 459
               +  RW++
Sbjct: 462 ---PQGIRWRR 469


>gi|85715405|ref|ZP_01046387.1| cysteinyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
 gi|85697826|gb|EAQ35701.1| cysteinyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
          Length = 477

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 243/483 (50%), Positives = 315/483 (65%), Gaps = 36/483 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL ++   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG
Sbjct: 1   MELRLYDTLTKQKRVFDPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRNLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI +RA ++ P + +N+AI  +T K   QF  D   L CL PTHQ
Sbjct: 61  ADHVTYVRNITDVDDKINDRAARDFPGLSLNEAIRKVTEKTAAQFQADVAALGCLPPTHQ 120

Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT  +         M+  I+ +I  GHAY+A  E++FD  S+P+YG+ S R+++EQK 
Sbjct: 121 PRATEFVLPRADGKTDMVTFIKQLIARGHAYKAGGEVLFDVRSMPDYGALSGRRLEEQKA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G R+    HK+NPADF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG+VFDIHG
Sbjct: 181 GARIAVDEHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSAAYLGEVFDIHG 240

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL T 
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGSHAMANYWMHNGFLQVEGEKMSKSLGNFVTINELLTTG 300

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQT 340
           KFGGR WP  V+RL ML THYR+PID+T + L E+E +L +                 + 
Sbjct: 301 KFGGRKWPGEVLRLNMLRTHYRQPIDWTTKALEESETILRRICGRIKQFDDARRGMAMKE 360

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-- 398
            + +  + P +L AL +DLNT   I  + +L  +   +  LL I        GI+V    
Sbjct: 361 RSGQPKLSPEILEALVDDLNTPLMISRVGELNHDDAFDQALLSI--------GIDVFSYA 412

Query: 399 ---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                  +     +++LV  RL   K K F  +D IR +L + G +L+D K+ D G+ +T
Sbjct: 413 RWLRSQEQQAGSNVDELVAARLEARKRKDFKESDRIRDELAAMGVVLKDSKDAD-GKPVT 471

Query: 456 RWK 458
            W+
Sbjct: 472 TWE 474


>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 463

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 169/485 (34%), Positives = 258/485 (53%), Gaps = 57/485 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IVFD + + L Y   E  V
Sbjct: 1   MYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGYE--V 58

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV N TD+DDK+I+ A +      + + + +I  +  + + +D   L C      PR T
Sbjct: 59  QYVSNFTDVDDKLIKAANE------LGEEVPVIAERFIKAYFEDVGSLGCTKADCHPRVT 112

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            ++ ++I  IQ +I  G+AYEA+ ++ + T S   YG  S + +DE + G R+     K+
Sbjct: 113 ENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +  DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHE
Sbjct: 173 DALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +     V
Sbjct: 233 NEIAQSEALTG-KPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KEHDPQV 284

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------------G 345
           +R  ML  HYR PI+++V+ L   +    +     ++                       
Sbjct: 285 LRFFMLSVHYRHPINYSVELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIE 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGI 394
               A  +A+ +D NT +AI  L  LA+ +                 + +F+    +LG 
Sbjct: 345 EQRKAFQTAMDDDFNTANAISVLFDLAKHANYYLQEKNTAEHVIQAFIQLFDEICSVLGF 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            + ++ L   +   IE+L+++R    + + F+++D IR QL+S   ILED        + 
Sbjct: 405 SLKEQEL---LDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDT------PQG 455

Query: 455 TRWKQ 459
           TRWK+
Sbjct: 456 TRWKR 460


>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|226710842|sp|B5EEK6|SYC_GEOBB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 480

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 195/502 (38%), Positives = 260/502 (51%), Gaps = 66/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL     EF  I+P  + MYVCG TVYD  HIG+AR  +VFD++YR LR    
Sbjct: 1   MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN TDIDDKII RA ++            I+ +  ++F  D  RL    PT Q
Sbjct: 61  E--VTYVRNYTDIDDKIINRANRDGVPYN------EISERFIKEFDNDMARLMLQLPTFQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HIP++I L+Q +I  G AY++ +++ +       Y   S+R +++ + G R+   
Sbjct: 113 PKATEHIPEIIALVQTLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+  DIHGGG DLIF
Sbjct: 173 ERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+LE       S+
Sbjct: 233 PHHENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILE-------SY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------TSTSKGIIDPA 350
            A V+R  +L  HYR PIDF+ Q L EAE+ L +  +             +T  G  +  
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALAGIYERLASGANTPAGADNAE 344

Query: 351 VLS-----------ALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
            +            A+ +D NT  A+  L  L R   +                    A 
Sbjct: 345 FVEKVAGFAGRFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEQAKAEVAKMAA 404

Query: 391 ILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +LGI            +  K    +  +  IE L+ ER    K K F   D IR  L  K
Sbjct: 405 VLGICDSVPAAFLQRMKDRKTSDIEMSAEEIEALIAERAEARKAKNFKRGDEIRDLLLEK 464

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
             +L D        + T WK K
Sbjct: 465 NIVLLDS------AQGTTWKVK 480


>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 481

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 190/501 (37%), Positives = 260/501 (51%), Gaps = 67/501 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL      F+   P  + MYVCG TVYD+ HIG+AR  IVFD++YR L+  Y 
Sbjct: 1   MSLRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLK--YS 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN TD+DDKII RA +             ++ +  Q F +D  RL    PT Q
Sbjct: 59  DYDVTYVRNYTDVDDKIINRANER------GITSQQLSEEFIQAFDEDMARLGLDLPTVQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  +I L++ +I +G AY ++ ++ F   S  +Y   S+R +DE + G R+   
Sbjct: 113 PKATEHIDHIIALVERLIANGKAYASDGDVYFAVESFDSYLKLSKRNLDEMQAGARIAPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK + P EP WESPWG+GRPGWHIECSAM   YLG+ FDIHGGG DL+F
Sbjct: 173 EKKRNPMDFALWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI ++L+T       +
Sbjct: 233 PHHENEIAQSEAATG-QPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILKT-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKG 345
              V+R  +L  HYR PIDF+ Q L EA + LS++ +                  +T   
Sbjct: 285 DPEVVRFFILSAHYRSPIDFSDQNLKEARLGLSRFYEGLQAAAEVLAECPPSDVEATDGA 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
            +      A+ +D NT  AI  L +  R   +                   L   F    
Sbjct: 345 ELTAKFREAMDDDFNTAQAIGYLFEGIRTMNRLMATKKFRKKADLVASVRSLYDTFLELG 404

Query: 390 HILG---------IEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
            +LG         +   +     ++      I+ L+ ERL   + K F+ +D IR +L  
Sbjct: 405 KVLGMFGSEPKAWLNQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDELAE 464

Query: 438 KGFILEDYKNPDNGQRMTRWK 458
           KG +L D      G   T WK
Sbjct: 465 KGILLLD------GAGGTDWK 479


>gi|317500158|ref|ZP_07958391.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331087615|ref|ZP_08336543.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|316898447|gb|EFV20485.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330399794|gb|EGG79454.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 468

 Score =  579 bits (1493), Expect = e-163,   Method: Composition-based stats.
 Identities = 183/491 (37%), Positives = 256/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  ++   ++MYVCGPTVY+F HIGNARPMI FD + R   Y   E 
Sbjct: 1   MKIYNTLSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIAFDTVRRYFEYKGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E        +   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEE------GVSADEISKRYIAECKKDMEAMNVKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVEMISTLIEKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLRSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFLN++ +KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
           +   ++R  ML  HYR P++F+ + +  A+  L +    + +   +              
Sbjct: 285 YDLQILRFFMLSAHYRSPLNFSAELMEAAKNSLERILTAADNLKFLISNTSEEKMTESEK 344

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                      A   A+ +D NT  AI A+  L +      D          LL      
Sbjct: 345 RLFEKSSEYVEAFERAMDDDFNTADAIAAIFDLVKYMNTTADGASSKEYLQNLLDRLCLL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V KE   + +   IE+++++R    K + F+ AD IR +L +KG ILED +  
Sbjct: 405 TDVLGIIVIKEE--EMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGIILEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKK 467


>gi|153814444|ref|ZP_01967112.1| hypothetical protein RUMTOR_00656 [Ruminococcus torques ATCC 27756]
 gi|145848840|gb|EDK25758.1| hypothetical protein RUMTOR_00656 [Ruminococcus torques ATCC 27756]
          Length = 469

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 183/491 (37%), Positives = 256/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  ++   ++MYVCGPTVY+F HIGNARPMI FD + R   Y   E 
Sbjct: 2   MKIYNTLSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIAFDTVRRYFEYKGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E        +   I+ +   +  KD   +     T  P 
Sbjct: 61  -VNFVSNFTDVDDKIIKKAIEE------GVSADEISKRYIAECKKDMEAMNVKPATKNPL 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 114 ATEEICGMVEMISTLIEKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLRSGGRSLLVTG 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 174 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFLN++ +KMSKS GNF T+ E+       G  
Sbjct: 234 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVREI-------GEK 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
           +   ++R  ML  HYR P++F+ + +  A+  L +    + +   +              
Sbjct: 286 YDLQILRFFMLSAHYRSPLNFSAELMEAAKNSLERILTAADNLKFLISNTSEEKMTESEK 345

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                      A   A+ +D NT  AI A+  L +      D          LL      
Sbjct: 346 RLFEKSSEYVEAFERAMDDDFNTADAIAAIFDLVKYMNTTADGASSKEYLQNLLDRLCLL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V KE   + +   IE+++++R    K + F+ AD IR +L +KG ILED +  
Sbjct: 406 TDVLGIIVIKEE--EMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGIILEDTR-- 461

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 462 ----EGVKWKK 468


>gi|241667314|ref|ZP_04754892.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 459

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 249/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  K  EF+ I+P+ I+MYVCG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRNITDIDDKII+RA +        +    +  +  +       +L  L PT +PRAT
Sbjct: 61  TFVRNITDIDDKIIKRANEN------GETTDQLVERTIKSMHDAFDKLNILRPTKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+MI +I+ ++  G AY+  N ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 QTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TINE++E        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           VIR  +  T YR  I+++ + L  A   + +                      +   + A
Sbjct: 287 VIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDANEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDIEEYFKQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +      IEKL+ ER    K K ++ AD IR +L+++G ILED          T WK+
Sbjct: 407 DGIDVSEIEKLIAERAQAKKDKNYARADEIRNELQNQGIILEDSAT------GTTWKK 458


>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 494

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 186/495 (37%), Positives = 263/495 (53%), Gaps = 58/495 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +YNTL R+   F  IDP+N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR   
Sbjct: 20  KPMLNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 79

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               +TYVRNITDIDDKII RA +        + I  +T++      +D   L  L P  
Sbjct: 80  Y--PLTYVRNITDIDDKIIARAAEN------GETIGELTARFIAAMHEDADALGVLRPDL 131

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +P+AT +IPQMI +I+++I  G AY A N ++ +     P YG  S + +D+ + G RV 
Sbjct: 132 EPKATENIPQMIAMIESLIQKGKAYPAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVE 191

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK +   EP WESPWG+GRPGWHIECSAMS +  G  FDIHGGG DL
Sbjct: 192 VDGFKRDPLDFVLWKAAKAGEPAWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGGADL 251

Query: 241 IFPHHENEIAQSCCA------------DRIEKTA---NIWIHNGFLNLEGRKMSKSNGNF 285
            FPHHENEIAQS  A               +  A     W+HNGF+ ++G KMSKS GNF
Sbjct: 252 QFPHHENEIAQSVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNF 311

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----- 340
            TI ++L       + +   V+R  +L  HYR P++++   L +A+  L++         
Sbjct: 312 FTIRDVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALKNTP 364

Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--PIFNASAHIL 392
                 S +         +A+ +D  TV A+  L +LA E  K  D        A   I+
Sbjct: 365 PAGFALSETANNYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTRDAALSGCLKALGGII 424

Query: 393 GI------EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G+      E  +     +   +  IE L+  R      K ++ +D IR  L ++  ILED
Sbjct: 425 GLLQRDPTEFLQGGTASDGLSNEEIENLIAMRKQARADKNWAESDRIRDLLTAQNIILED 484

Query: 445 YKNPDNGQRMTRWKQ 459
                    +T W++
Sbjct: 485 S------AGITTWRR 493


>gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 481

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 194/501 (38%), Positives = 264/501 (52%), Gaps = 67/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     +F  ++P  ++MYVCG TVYD  HIG+AR  +VFD++YR LR+   E 
Sbjct: 3   LRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA +E     +      I+ +   +F +D   L    PT+QP+
Sbjct: 62  -VTYVRNYTDVDDKIINRANKEGVPFNV------ISERFIAEFDRDMAALGLDLPTYQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +I+ ++  G AY A+ ++ F   +   Y   S+R ++E + G R+     
Sbjct: 115 ATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  WIHNGF+N+   KMSKS GNF TI E+LE       S+ A
Sbjct: 235 HENEIAQSEAANG-KPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLE-------SYDA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA--- 350
            V+R  +L  HYR PIDF+ Q L EA   L +                T  G ID     
Sbjct: 287 EVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGRIDEELAE 346

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHI 391
                      A+ +D NT  A+  +  L R   +                   +    +
Sbjct: 347 KAAGLPTRFREAMDDDFNTAQALGYVFDLVRAVNRVLAEGEIDRAVLASAREAIDRVGAV 406

Query: 392 LG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           LG            ++  K       +  IE+L++ER    K + F  AD IR  L ++G
Sbjct: 407 LGLFTSEPGAFVERLKSRKAAALPIEAAEIERLIEERNAARKAQDFRRADEIRDTLAAQG 466

Query: 440 FILEDYKNPDNGQRMTRWKQK 460
            +L D        + T WK K
Sbjct: 467 ILLLDS------AQGTTWKVK 481


>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 465

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 184/480 (38%), Positives = 250/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL     EF+ ++   ++MYVCGPTVYDF HIGNARP+IVFD L R   Y   E 
Sbjct: 1   MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD++DK+I RA +E  ++        +  +  Q++ KD  RL     T  PR
Sbjct: 60  -VIYIQNFTDVEDKMINRANKEGVTVF------ELAERFIQEYYKDADRLNVKRATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI LIQ +I  G+AY  + ++ F T     YG  S + I+E   G RV     
Sbjct: 113 ATEEIEDMIALIQTLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK     EP W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  +   +  A  W+HNG++N+   KMSKS GNF T+ E++E        +  
Sbjct: 233 HENEIAQSEASTG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
             +RL ML  HYR+P++F++  + +AE  L +      +                     
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAESALKRIYTCYENLEYLIKNGTTSNSSDSTLKAV 344

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLL----PIFNASAHILGI 394
              +    + A+ +DLNT  A   L ++ RE        + D+L            ILGI
Sbjct: 345 LKELKAKFIDAMEDDLNTAEATGYLFEMVREINTHSNTCSKDVLILARDTLKELCSILGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E     I   I +LV++R    K K F  AD IR  L S G+I+ D       +R+
Sbjct: 405 LEQYEEKKDEIPPEILELVEKRNEARKAKNFLEADRIRDDLRSLGYIVLDTPQGTKIERI 464


>gi|194017569|ref|ZP_03056180.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010841|gb|EDW20412.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 466

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 169/489 (34%), Positives = 256/489 (52%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL RK  EF  ++P  ++MYVCGPTVY++ HIGNARP IV+D + + L Y   
Sbjct: 1   MTINIYNTLTRKKEEFVPLEPGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRKYLEYSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I+ A +      + + +  I  +  Q + +D + L C      
Sbjct: 61  D--VNFVSNFTDVDDKLIKAANE------LGEDVPTIADRFIQAYFEDVSALGCKKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  I  +I  G+AYEA+ ++ + T S   YG  S + IDE K G R+   
Sbjct: 113 PRVTENMDDIIAFIATLIEKGYAYEADGDVYYSTRSFEGYGKLSHQSIDELKTGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKRDALDFALWKAAKDQEISWDSPWGEGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+E  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWMHNGYINIENEKMSKSLGNFVLVHDIV-------KEQ 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI++++  L   +   ++   +  +                   
Sbjct: 285 DPDVLRFFMLSVHYRHPINYSMDLLESTKSAFNRLKTSYANLHHRLESSTNITEDNAEWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
                     +S + +D NT +AI  L +LA+++    +            + +F     
Sbjct: 345 AKVEEQRATFISEMNDDFNTANAISVLFELAKQANYYMENDHTSEEVIKAFIGLFQEITS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG  + ++H    +   +E L+++R    + + F+ +D IR QL+S   +LED      
Sbjct: 405 VLGFSLEEKHT---LDEEVEALIEKRNEARRNRDFALSDQIRDQLKSMNIVLEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -PQGTRWKR 464


>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
 gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
          Length = 474

 Score =  579 bits (1492), Expect = e-163,   Method: Composition-based stats.
 Identities = 181/494 (36%), Positives = 265/494 (53%), Gaps = 57/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++P N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +  
Sbjct: 2   PNLTVYNTLTRQKEPFIPLNPQNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              +TYVRNITDIDDKII RA +        + I  +T++      +D+  L    P  +
Sbjct: 62  --PLTYVRNITDIDDKIIARANEN------GETIQQLTARFIAAMNEDSDALGVQRPDVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT HI QMI +I+ +I +G AY  AN ++ +     P YG  S + +D+ + G RV  
Sbjct: 114 PKATEHIAQMIAMIEQLIANGKAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVEV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK + P EP W+SPWG GRPGWHIECSAM     G  FDIHGGG DL 
Sbjct: 174 DGFKRDPLDFVLWKAAKPEEPHWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADLQ 233

Query: 242 FPHHENEIAQSCCADRI--------------EKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           FPHHENEIAQSC A                 +     W+HNGF+ ++  KMSKS GNF T
Sbjct: 234 FPHHENEIAQSCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFFT 293

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
           I ++L       + + A V+R  +L  HYR P++++   L +A+  L+       +    
Sbjct: 294 IRDVL-------KKYDAEVVRFFILRAHYRSPLNYSDAHLDDAKHSLTSLYNALGNVAPA 346

Query: 344 -------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI 394
                           +A+ +D +TV A+  L +LA+E  K  + +L     A A +LG+
Sbjct: 347 PFTLSEHANDYTRRFYAAMDDDFDTVKAVAVLFELAKEVNKTQSAELSGCLKALAGVLGL 406

Query: 395 EVCKEH--------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              + H         N   + AIE L+ +R +    K ++ +D IR +L ++G +L D  
Sbjct: 407 LQREPHEFLQSGAPDNGLSADAIEALIAQRNLARANKNWAESDRIRDELAAQGVVLRD-- 464

Query: 447 NPDNGQRMTRWKQK 460
                   T W ++
Sbjct: 465 ----AGGETTWTRE 474


>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 463

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 186/484 (38%), Positives = 256/484 (52%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+ I P  +R+YVCG T YD+ HIG+AR M+ FD + R LR+   + 
Sbjct: 1   MQIYNTLSRSKQVFEPIHPGQVRLYVCGITTYDYCHIGHARVMVAFDAITRYLRHRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKI++RA +        +A   +T++      +D   L  L P  +PR
Sbjct: 60  -VTYVRNITDIDDKILKRAEEN------GEAYDTLTARFIDAMHEDERALGVLPPDREPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I LIQ +I  G AY A N ++ F  S   +YG  S +K+++   G RV  + 
Sbjct: 113 ATQHIQDIIDLIQVLIDKGAAYTAENGDVYFSVSDFADYGKLSNKKLEDLLEGVRVELES 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK +   + GWE+PWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 173 SKRDPRDFALWKGAQQDQVGWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E  AN+W+H G + ++  KMSKS GNF TI E+LE        + 
Sbjct: 233 HHENEIAQSEAATG-ETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLE-------KYQ 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------QTSTSKGIIDPAV 351
             VIR  +L +HYR PI+++   L +A   L +              + + S      A 
Sbjct: 285 PEVIRYFLLSSHYRSPINYSDNSLEQARAGLERLYTALRPYSDVAADEAALSDSSALQAF 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILGIEVCKEH------ 400
              + +D NT  A+  L  LAR+  +       ++         +LG+            
Sbjct: 345 QQVMDDDFNTREALSVLFDLARQLNQQEGEAARNIAVQLKTLGRVLGLLEGDAQAYLKSG 404

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        I+ L+ ER+   + K F+ AD IR QL   G  LED      G   T
Sbjct: 405 GLVSDAGSLSDDDIDALIAERIEAKQNKDFARADDIRDQLTEAGIQLED------GPAGT 458

Query: 456 RWKQ 459
           +W++
Sbjct: 459 QWRR 462


>gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [marine bacterium HP15]
          Length = 462

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 185/482 (38%), Positives = 261/482 (54%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL ++  EF+ I+P  +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR+   + 
Sbjct: 2   IRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI+ RA +        +    +T +  +   +D  RL  L+P  +PR
Sbjct: 61  -VNYVRNITDIDDKILRRADEN------GEPYDELTDRMIKAMHEDEARLGVLSPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I +I  +I  GHAY A+  ++ F   S  +YG  S++K+++   G RV  + 
Sbjct: 114 ATAYIDEIIAMIHKLIAGGHAYAADNGDVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF LWK +   E  W SPWG GRPGWHIECSAMS+  LG+ FDIHGGG DL+FP
Sbjct: 174 AKRSPADFALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H G + +   KMSKS GNF TI E++E        +P
Sbjct: 234 HHENEIAQSECATG-HTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIME-------KYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAVLS 353
           A V+R  ++ +HYR  +D++ + L EA   L++                 +   D     
Sbjct: 286 AEVVRYFLVSSHYRSQVDYSEENLAEAGRTLTRLYHALRGIVPAKAADVPESEHDERFAE 345

Query: 354 ALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHL--- 401
           A+ +D NT  AI  LH +A E                  I      +LG+          
Sbjct: 346 AMDDDFNTAGAIAVLHAVANEINQHRRDGREDDAKQSAAILVRLGGVLGLLQQDPEAFFQ 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                +  +  IE ++Q R    K K F+ AD IR +L  KG IL+D +        T W
Sbjct: 406 ADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSR------EGTTW 459

Query: 458 KQ 459
           ++
Sbjct: 460 RK 461


>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|61216300|sp|Q82Y45|SYC_NITEU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 465

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 183/486 (37%), Positives = 267/486 (54%), Gaps = 52/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL R   EF  + P  +RMYVCG TVYD+ H+G+AR ++VFD + R L+    + 
Sbjct: 2   LKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQTLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII RA + H      +  S +T++  Q   +D   L  ++P+ +PR
Sbjct: 61  -VIYVRNITDVDDKIIRRALENH------EPFSALTARYIQAMEEDAMALGVISPSFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  MI +I++++    AY A N ++ +D    P YG  S + +D+ + G RV    
Sbjct: 114 ATEYVDSMIAMIESLLNRELAYVASNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEIDT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAMS HYLG  FDIHGGG DL FP
Sbjct: 174 NKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS          N W+HNGF+ ++  KMSKS GNF T+ E+L         + 
Sbjct: 234 HHENEIAQSEGVHG-HSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLTR-------YQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA--- 350
             V+R  ++  HYR P++++   L +A   L +             +  +  +ID     
Sbjct: 286 PEVVRFFIVRAHYRSPLNYSDAHLNDARSALERLYTVLKNHAPSQDSEVATAVIDWENNV 345

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKE----- 399
                +SA+ +D NT  A+  L  LA E+ +  D     +  A   +LG+          
Sbjct: 346 YARRFMSAMNDDFNTPEAVAVLFDLASEANRTGDSHYASLLKALGGVLGLLQQPPQQYLQ 405

Query: 400 -----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   +     IE ++Q+RL   K + F+ AD +R+QL   G ILED        + 
Sbjct: 406 YPAHLQDGQYSVEEIENMIQQRLQARKERNFAQADTLRQQLAEAGIILEDS------PQG 459

Query: 455 TRWKQK 460
           T W+++
Sbjct: 460 TTWRRE 465


>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
          Length = 487

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 181/508 (35%), Positives = 252/508 (49%), Gaps = 71/508 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IK+YNT  RK  EF    P  + MYVCGPT Y+  H+GNARP+IVFD + R   Y   
Sbjct: 1   MTIKLYNTCTRKKEEFIPRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TDIDDKII RAR+E      N     + +K  +++ KD   L     T  
Sbjct: 61  Q--VTYVQNFTDIDDKIINRAREE------NTDPITLAAKYIREYFKDAAALGVREATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+ ++I +I+ I+ +G+AY+ + ++ F   S   YG  S R +++ + G RV   
Sbjct: 113 PRVSEHLDEIIEMIRGIMKNGYAYQLDGDVYFSVESFKGYGKLSGRSLEDMQAGARVDVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM++ YLG  FDIHGGG DLIF
Sbjct: 173 TRKRHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMANKYLGMGFDIHGGGFDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+         A  W+HNGF+ +   KMSKS GNF T+ E+L         +
Sbjct: 233 PHHENEIAQAEAYAGCGPFARYWMHNGFITVNEEKMSKSLGNFFTVREILA-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
              V+R  ML THYR P+DF   +L      LS+                          
Sbjct: 286 DPEVVRFYMLSTHYRSPLDFDDTKLEMNRKSLSRLHNALDNIESILKTNKFGEVENPELE 345

Query: 343 --------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------------------ 376
                   ++         A+ +D NT  AI  L  LAR+S                   
Sbjct: 346 KALADLLRAREKAVRDFEEAMDDDFNTALAIAVLFDLARDSNAFIHAATSAGGDALLQEV 405

Query: 377 --KNHDLLPIFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                 +   F     +LG+   +  +     +   ++ ++  R      K +++AD IR
Sbjct: 406 KGALQQVFDTFMKLGQVLGLFEKRGTQGDTGLVDRLMQIILDIRSEARARKDWATADGIR 465

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +L   G I+ED        +  RWK+K
Sbjct: 466 NKLNELGIIIEDS------PQGARWKRK 487


>gi|304413758|ref|ZP_07395202.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283849|gb|EFL92243.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 506

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 184/486 (37%), Positives = 259/486 (53%), Gaps = 52/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ ID   I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 43  LKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVAFDVIVRYLRYL--DY 100

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA +       N+    +T +   +  +D   L  L P  +P+
Sbjct: 101 DLTYVRNITDIDDKIIKRAAEN------NETCQQLTERMMIEMYRDFDALNILRPNEEPQ 154

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I LI+ +I   HAY  A+ +++F   S PNYG  SR+ ++  + G RV    
Sbjct: 155 ATAHITEIIALIKKLIEGKHAYIAADGDVVFAVKSAPNYGLLSRQNLENLQAGARVAIAD 214

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWKR+ P +P W+SPWG GRPGWHIECSAM++  LG+ FDIHGGG DL+FP
Sbjct: 215 GKEDPMDFVLWKRALPGDPSWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGGGSDLLFP 274

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +   N W+H G + +E  KMSKS  NF TI +LL+        + 
Sbjct: 275 HHENEIAQSTCAHG-DPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLD-------HYD 326

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLS 353
           A  +R  ++  HYR  +D++ + L ++ I L +              + +    +     
Sbjct: 327 AETVRYFLMSAHYRSQLDYSEENLRQSRIALERLYIALRGTDETASAAAAGENFEKRFRD 386

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK------- 398
           A+ +D NT  A   L  +ARE  +           L     + A +LG+   K       
Sbjct: 387 AMDDDFNTPEACAVLFDIAREVNRLKTEDNAAASGLAATLRSMAQVLGLLTQKPEHFLQA 446

Query: 399 ----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E         IE L+++R    + K +  AD  R QL      LED      G + 
Sbjct: 447 VNHSEIAKDTEIAKIEALIEQRNTARQQKNWVLADEARHQLNEMKITLED------GPQG 500

Query: 455 TRWKQK 460
           T W++K
Sbjct: 501 TTWRRK 506


>gi|75675421|ref|YP_317842.1| cysteinyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|109894914|sp|Q3STA1|SYC_NITWN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|74420291|gb|ABA04490.1| cysteinyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 477

 Score =  578 bits (1491), Expect = e-163,   Method: Composition-based stats.
 Identities = 245/478 (51%), Positives = 314/478 (65%), Gaps = 26/478 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+TL R+   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MDLRLYDTLTRRKRAFTPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTY RNITD+DDKI +RA ++ P +P+N+AI  +T K   QF  D   L CL PTHQ
Sbjct: 61  DDHVTYARNITDVDDKINDRAARDFPDLPLNEAIRKVTEKTAAQFQADVAALGCLPPTHQ 120

Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT  +         M+  I+ +I  GHAYEA  E++FD  S+P+YG+ S R++DEQK 
Sbjct: 121 PRATEFVLPRTDGKTDMVTFIKQLIARGHAYEAGGEVLFDVRSMPDYGALSGRRLDEQKA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G RV    HK+NPADF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARVAVDAHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSTAYLGDVFDIHG 240

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL T+
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHAMANYWMHNGFLQVEGEKMSKSLGNFVTINELLTTE 300

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
           KFGGR WP  V+RL ML THYR+PID+T++ L E+E +L +                   
Sbjct: 301 KFGGRKWPGEVLRLNMLRTHYRQPIDWTIKALEESETILRRVCGRIKQFEYARRGMPTKE 360

Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
                 + P +L AL +DLNT   +  + +L+ +   +H LL I      +L        
Sbjct: 361 RSVQLNLPPEILEALVDDLNTPLMLSRIGELSYDDAFDHALLSI---GIDVLSYARWLRS 417

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +  S  +++LV  RL     K F  +D IR +L + G +L+D K+ D G+ +T W+
Sbjct: 418 QEQYASSNVDELVVARLEARMRKDFKESDRIRDELAAMGVVLKDGKDAD-GKPVTTWE 474


>gi|115524011|ref|YP_780922.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|122296629|sp|Q07Q42|SYC_RHOP5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115517958|gb|ABJ05942.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 463

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 230/468 (49%), Positives = 304/468 (64%), Gaps = 20/468 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL R+   F  +DPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MELRLYDTLSREKRTFTPLDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKI +RA ++ P +P+N+AI  +T +  +QF  D   L CL PT +
Sbjct: 61  EAHVKYVRNITDVDDKINDRAARDFPGLPLNEAIRKVTEQTEKQFHDDVDALGCLRPTVE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
           PRAT HI +M  +I  +I  G AY A + ++F   ++       P YG+ + R +DE   
Sbjct: 121 PRATEHIGEMRDIIDRLIAGGFAYVAADHVLFSPQAMNAKDGVLPRYGALANRSLDEMIA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
           G RV    +K++  DF+LWK S P EP W SP G   +GRPGWHIECSAMS  +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPGGIAVQGRPGWHIECSAMSWKHLGERFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHENE+AQSCCA   E+ A  W+HNGFL +EG KMSKS GNF+TI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTERMAETWMHNGFLQVEGEKMSKSLGNFVTIRELL 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAV 351
            T KFGG+ W   V+RLAML THYR PID+TV+ L EAE  +  W + T  +       V
Sbjct: 301 ATDKFGGKRWDGAVLRLAMLKTHYRSPIDWTVEALHEAEKAIYDWSEFTKDATPAPCDEV 360

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIE 410
           + AL +DLNT   I  LH L R   K  +LL        +LGI  V ++ +   I +  +
Sbjct: 361 IDALADDLNTPKMIAELHGL-RRVGKPAELLGAL----QLLGIGRVFRQTIE--IDVNAQ 413

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            L++ R      K F  +D IR +L + G +L+D K+ D G+ +T W+
Sbjct: 414 ALIEARTAARARKDFKESDRIRDELAAMGVVLKDGKDAD-GKPVTTWE 460


>gi|160933144|ref|ZP_02080533.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
 gi|156868218|gb|EDO61590.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
          Length = 470

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 183/488 (37%), Positives = 263/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I P   ++Y CGPTVY+F HIGNARPM VFD+L R L Y   + 
Sbjct: 1   MKIFNTLTRQKEEFVPIAPGEAKIYACGPTVYNFIHIGNARPMCVFDILRRYLEYRGMK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII +A +E            +  +  Q++  D   L     T  PR
Sbjct: 60  -VTFVQNFTDIDDKIIRKANEEKT------DYLTVAERYIQEYKTDARGLNIREATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + Q+I +I +++  G+AY A N ++ F T     YG  S + ++E + G R+    
Sbjct: 113 ATETMEQIIEIISDLVKKGYAYPAENGDVYFRTLKFSGYGKLSHQPLEELEAGARIGVGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DLIFP
Sbjct: 173 SKEDPMDFALWKAAKPGEPYWDSPWGKGRPGWHIECSAMARTYLGDTIDIHCGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS C + +   A+ W+HNG++N++ RKMSKS  NF T+ E+        + + 
Sbjct: 233 HHENEIAQSECCNGV-PFAHYWMHNGYINVDNRKMSKSLNNFFTVREV-------AKEFG 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
              IR  M+ +HYR PI+++V  L +    L +      +   +                
Sbjct: 285 YEPIRYLMVASHYRSPINYSVDLLKQCTAALERLYTCRENLEFVVSNAKPGREARDEEIK 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
                       A+ +DLNT  AI  L +LA++   N             + L +FN+ A
Sbjct: 345 KRLEEYQNRFCEAMDDDLNTADAIAVLFELAKDINTNLSTATNPHKEIAEEALTLFNSLA 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+   K+    ++   IE L+Q R+   K K ++ AD IR +L ++  +LED     
Sbjct: 405 DVLGLLYVKKDTKDSLDEEIENLIQRRVEARKNKNWAEADRIRDELSARHVVLEDT---- 460

Query: 450 NGQRMTRW 457
              + T+W
Sbjct: 461 --PQGTKW 466


>gi|319654847|ref|ZP_08008922.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317393410|gb|EFV74173.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 467

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 168/487 (34%), Positives = 248/487 (50%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+  +F  I+   ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IQIYNTLTRQKEDFIPIEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +      +   +  I  +    + +D + L C      PR
Sbjct: 62  -VQYVSNFTDVDDKLIRVANE------LGTDVPSIAERFINAYFEDVSALGCRKADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  I  +I  IQ +I  G AYE+  ++ + T     YG  S + IDE ++G R+     
Sbjct: 115 VTESIDIIIEFIQTLIDKGFAYESEGDVYYHTRKFDEYGKLSHQSIDELRVGARIAVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF+LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDSLDFVLWKAAKEGEIAWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFVLVHDII-------QKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTSTS 343
            V+R  ML  HYR PI+++ + L      L +                       +    
Sbjct: 287 QVLRFFMLSVHYRHPINYSDELLENTRTGLERIKTSYHNLQHRKEASVNLTDNNQEWLDK 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPI----FNASAHIL 392
              +    +  + +D NT +A+  L +L++       E     +++      F     +L
Sbjct: 347 ITSLHEQFIQDMDDDFNTANAVSILFELSKLANYYLMEKNTAVEVIDAFTKEFETLFDVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+   +E     +   IE+L+++R    K + F  AD IR QL+    ILED        
Sbjct: 407 GLS-LEETNADLLDEEIEQLIEQRQQARKERNFELADKIRDQLKEMNIILEDT------P 459

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 460 QGIRWKR 466


>gi|332532274|ref|ZP_08408155.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038372|gb|EGI74817.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 459

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 172/477 (36%), Positives = 261/477 (54%), Gaps = 46/477 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+  +F+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+   +  +
Sbjct: 4   IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYD--L 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII+RA +        ++I+ +T + T+   +D   L  L P  +P  T
Sbjct: 62  KYVRNITDIDDKIIKRANEN------GESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           +H+ ++I +++ +I  GHAY A + +++FD S+   YG+ S++ +   + G+RV     K
Sbjct: 116 SHMDEIIAMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
            +P DF+LWK++   EP W SPWG GRPGWHIECS MSS +LG+ FDIHGGG DL FPHH
Sbjct: 176 DDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSVMSSKHLGEHFDIHGGGSDLQFPHH 235

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQSCCA+  +   N WIH G + +   KMSKS  NF T+ E+L       +++ A 
Sbjct: 236 ENEIAQSCCANNGK-YVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KAYDAE 287

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLSALY 356
            +R  ++  HYR  ++++ + L +A   L +          ++              A+ 
Sbjct: 288 SVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVVPVECDLEGNEFVAKFRKAMN 347

Query: 357 NDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHLN 402
           +D NT  A+  L +LA+E  +  +        L  I  +   +LG+         +   +
Sbjct: 348 DDFNTPEALPVLFELAKELNRVKESDAGQAGKLAFILRSLGEVLGVAQQAPEAFLQGGQD 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +    IE L+ +R      K +++AD  R  L + G ILED          T W++
Sbjct: 408 DDEVATIEALIVKRNEARASKDWAAADEARDALNALGVILEDS------AGKTTWRK 458


>gi|254369813|ref|ZP_04985823.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157122772|gb|EDO66901.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 464

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 252/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANEN------GESTTELVERNIRAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                 +    +   + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDNASEYEEKFIKA 351

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 412 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463


>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 468

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 185/486 (38%), Positives = 261/486 (53%), Gaps = 58/486 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN L  +   F  ++   +R YVCGPTVYD+ HIGNARP IVFDV+ R L +   +  V
Sbjct: 5   VYNDLTNRKEPFVPLEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEHLGYQ--V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYV+N TDIDDK+I+RA++      +   +  +  +  + + +D   L     T  P+AT
Sbjct: 63  TYVQNFTDIDDKMIKRAQE------MGITVKELADRFIEAYYQDADALGIRRATVNPKAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             IP +I LI+ +I  GHAY+ + ++ FD  S P YG   ++ ++E + G RV     K+
Sbjct: 117 EEIPHIIELIELLIQKGHAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARVEVDPRKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF LWK   P EP W+SPWG GRPGWHIECSAM  H+LG   D HGGG DL+FPHHE
Sbjct: 177 HPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCDLVFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS  A   +     W+HNG+L ++  KMSKS GNF+T  +L+       + +P  V
Sbjct: 237 NEIAQSEAATG-KPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDLM-------KRFPPLV 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPA------------ 350
           IRL ML  HYR PI+F+ + L +A+  L +    W Q   +     P+            
Sbjct: 289 IRLFMLSAHYRSPINFSEENLRQAQAALERLRNGWAQIRFALDNPPPSTSESRELREQIA 348

Query: 351 -----VLSALYNDLNTVSAIQALHKLARESTK------NHDLLPI------FNASAHILG 393
                   A+ +DLNT  A+ A+  L R +        + DL  +            I+G
Sbjct: 349 RYRDDFHRAMDDDLNTAEALGAVFSLIRATNSHLSRGDSPDLAALEEASNFLRDVDRIMG 408

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +    E     +   +E L++ER    K + F+ AD IR +L S G +LED        +
Sbjct: 409 VIGIDE---DQLDRDVEALIEERNAARKARDFAKADAIRDRLSSMGIVLEDT------PQ 459

Query: 454 MTRWKQ 459
            TRWK+
Sbjct: 460 GTRWKR 465


>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
 gi|187629804|sp|A0PXS5|SYC_CLONN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
          Length = 466

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 169/489 (34%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y   + 
Sbjct: 1   MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E      N  +  +  +   ++ KD   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIHEYYKDADGLNIKRATANPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++ ++I  ++++I  G+AYE N ++ F T     YG  S + +D+ + G R+     
Sbjct: 113 ATEYMDEIIQFVKDLIDKGYAYEVNGDVYFSTKQFKEYGKLSGQNLDDLQAGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W  PWG+GRPGWHIECS M+   LG   DIH GG DL+FPH
Sbjct: 173 KKDPMDFAIWKSEKPGEPSWNCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +  AN W+H+ +LN+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARNG-KTFANYWMHSAYLNINNKKMSKSLNNFFTTREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIRL ML  HYR P++F+   L  A+    +      +   +   V             
Sbjct: 285 EVIRLFMLSAHYRTPLNFSDDLLQSAKASNERLYNAIGNLERLLDEVKVDKVTENEKEYV 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L ++   N +           L +       
Sbjct: 345 KNLESYKEKYIEKMDDDFNTADAISVIFDLVKDINTNINTESSKELVEYSLELIRELGKP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI      L+  ++  IEKL+++R    K K ++ AD IR  L+++G +LED       
Sbjct: 405 LGILQKSTMLD--LNAEIEKLIEQRQQARKDKDWALADKIRDDLKARGIVLEDT------ 456

Query: 452 QRMTRWKQK 460
            +  RWK++
Sbjct: 457 PQGVRWKRE 465


>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123084029|sp|Q1QVV6|SYC_CHRSD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 461

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 257/478 (53%), Gaps = 47/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   F  +D   +RMYVCG TVYD+ HIG+AR M+ FD++ R LR+   E 
Sbjct: 1   MQIYNTLTRRKETFTPLDAGRVRMYVCGITVYDYCHIGHARVMVAFDMITRYLRWRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI++RA +       ++ I+ +T +      +D  RL  L P  +PR
Sbjct: 60  -VDYVRNITDIDDKILKRAEEN------DEPIAALTERMIAAMHEDEGRLGVLRPDREPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  ++ ++Q +I  G+AY A N ++ +       YG  S R +D+ + G+RV  + 
Sbjct: 113 ATAHVDDIVAMVQRLIDKGYAYPAANGDVYYRVRRFEGYGKLSNRDLDDMRAGSRVEVET 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P E  W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 173 AKEDPLDFVLWKAAKPGEASWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+H G + ++  KMSKS GNF TI E+LE          
Sbjct: 233 HHENEIAQSEAATG-RPYVNTWMHAGAVRVDQEKMSKSLGNFFTIREVLEAH-------A 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLSAL 355
             V+R  +L +HYR PI++    L++A   L ++         +            ++A+
Sbjct: 285 PEVVRYLLLASHYRSPINYAPDALSDARRSLERFYNALQGVAPVAGEVAAGYRERFIAAM 344

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI--EVCKEHLNKNI 405
            +D NT  A+  L  LARE  +           L         +LG+  +  +  L    
Sbjct: 345 DDDFNTAEALAVLFDLARELNRAKQEAPAHAPALAHELKELGGVLGLFGQDPEGFLQAGA 404

Query: 406 ------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                    IE  ++ R    K K F++AD IR +L + G +L+D ++       T W
Sbjct: 405 GRLPMSEEDIEARIEARAQAKKAKDFATADGIRDELAALGIVLKDGRD------GTTW 456


>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
           27560]
 gi|149734002|gb|EDM50121.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
           27560]
          Length = 470

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 182/491 (37%), Positives = 260/491 (52%), Gaps = 58/491 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K  EF  ++   ++MYVCGPTVY+  HIGNARPMI+FD   R L Y   + 
Sbjct: 1   MKIYNTLTKKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTFRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            I+ +  ++  KD   L     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GTTAEEISQRYIKECKKDMHDLNIEPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I+ +I  G+AY+A+  + + T    +YG  S++ ID+ + G R   V  
Sbjct: 113 ATQEIDGMIEMIKTLIDKGYAYDADGTVYYRTRKFKDYGKLSKKNIDDLEAGHRDIKVAG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG   DIH GG DLI
Sbjct: 173 EESKEDPLDFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLGDEIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  +  W+HNGFLN+  +KMSKS GNF T+ ++ E        
Sbjct: 233 FPHHENEIAQSEAANGCE-FSKYWMHNGFLNINNKKMSKSLGNFFTVRDISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTSTSK 344
           +   V+R  ML  HYR P++F+   +  A+  L +                    T    
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSDDLMESAKNGLERIITSGAKIRDIISNGKDGKVTDAEA 344

Query: 345 GIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
            ++D A         A+ +D NT +AI A+ +L + +  N +          +  I +  
Sbjct: 345 KLLDEAKEYITKFEEAMDDDCNTANAISAVFELVKFANSNLNEGSTKEFAAGVYEILDKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            ++LGI + KE         IE+++ +R    K + F+ AD IR +L +KG +L+D +  
Sbjct: 405 CNVLGIILEKEEEKVGDEDYIEEMIAKRAQAKKDRDFAMADQIRDELAAKGIVLKDTR-- 462

Query: 449 DNGQRMTRWKQ 459
                 T+W +
Sbjct: 463 ----EGTKWSR 469


>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
           23834]
 gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
           23834]
          Length = 473

 Score =  578 bits (1490), Expect = e-163,   Method: Composition-based stats.
 Identities = 183/485 (37%), Positives = 258/485 (53%), Gaps = 52/485 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDVEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIEALIRNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS    G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI +
Sbjct: 236 ENEIAQSVGASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRD 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   ++R  +L  HYR P++++   L +A+  L++   T  +   ++  
Sbjct: 296 VL-------KQYDPEIVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLANVPPVEFQ 348

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI--- 394
                        +A+ +D +TV A+  L +LA E+ K  + +L     A A  +G+   
Sbjct: 349 VASEANDYTRRFFAAMNDDFDTVQAVAVLFELAGEANKTQSAELSGCLKALAGTIGLLQR 408

Query: 395 ---EVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     N   +  IE L+  R      K ++ +D IR  L  +G  L D  +  
Sbjct: 409 NPTEFLQGGATANGLSNEEIEALIARRKQARADKNWAESDRIRDLLAEQGITLRDGADGT 468

Query: 450 NGQRM 454
           +  R 
Sbjct: 469 SWTRG 473


>gi|253579512|ref|ZP_04856781.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849013|gb|EES76974.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 469

 Score =  577 bits (1489), Expect = e-163,   Method: Composition-based stats.
 Identities = 179/492 (36%), Positives = 252/492 (51%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF  ++   +RMYVCGPTVY+  HIGNARPMI+FD + R + Y   E 
Sbjct: 1   MKLFNTLTRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        +   I+ +   +  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVSAQEISERYIAECKKDMDGMNVKPATTNPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ ++  G+AY A +  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEINGMISMIQTLVDKGYAYPAADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W SPW  GRPGWHIECS M+  YLG   DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPSWPSPWCDGRPGWHIECSVMAKKYLGDEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS C +  +  A  W+HN FLN++ RKMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSECCN-DKIFAKYWMHNAFLNIDNRKMSKSLGNFRTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
            +   V+R  ML  HYR P++F+   +  A+  L +    + +      A          
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMEAAKNALERITDAAANLKDRKAAAQTETATDAE 344

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
                           A+ +D NT  A+ A+ +L + +  N            LL     
Sbjct: 345 KELLAQAQEFVKKFEEAMDDDFNTADALAAIFELVKFANTNVSEASSAEFAGTLLDTMVK 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LG++  K    + +   IE L+ ER    K K F+ AD IR +L +KG IL+D + 
Sbjct: 405 LCDVLGLKAVK--TEEILDKEIEDLIAERQEARKAKNFARADEIRDELLAKGIILKDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|194324147|ref|ZP_03057921.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|194321594|gb|EDX19078.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 464

 Score =  577 bits (1489), Expect = e-163,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 412 DGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463


>gi|118496920|ref|YP_897970.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|187629823|sp|A0Q4Q1|SYC_FRATN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118422826|gb|ABK89216.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
          Length = 459

 Score =  577 bits (1489), Expect = e-163,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 407 DGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458


>gi|89256953|ref|YP_514315.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115315315|ref|YP_764038.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134301406|ref|YP_001121374.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|156503147|ref|YP_001429212.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010049|ref|ZP_02274980.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254368215|ref|ZP_04984235.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|254372282|ref|ZP_04987773.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|295312486|ref|ZP_06803255.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|109894902|sp|Q2A1T7|SYC_FRATH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|122324692|sp|Q0BKI3|SYC_FRATO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629822|sp|A7NE53|SYC_FRATF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629824|sp|A4IWF2|SYC_FRATW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89144784|emb|CAJ80122.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115130214|gb|ABI83401.1| cysteine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134049183|gb|ABO46254.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|134254025|gb|EBA53119.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|151570011|gb|EDN35665.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3549]
 gi|156253750|gb|ABU62256.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 464

 Score =  577 bits (1489), Expect = e-162,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 412 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463


>gi|197301390|ref|ZP_03166471.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
           29176]
 gi|197299547|gb|EDY34066.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
           29176]
          Length = 468

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 182/485 (37%), Positives = 256/485 (52%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ ++  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTMSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKNYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E            I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKANEE------GVTAEEISKRYIEECKKDMEGMNIQPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I+ +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEIGGMISMIETLIEKGYAYEKNGTVYYRTRKFAEYGKLSHKNLDDLQSGGRALLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP W+SPWG GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWKSPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGFLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNRKMSKSLGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
           +   V+R  ML  HYR P++F+ + +  A+  L +    + +   +              
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLERITTAAENLKFLINNARTEDMSEDER 344

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                          A+ +D NT  AI A+ +L +      D          L       
Sbjct: 345 KKLAGSIAYVENFEKAMDDDFNTADAISAVFELVKYMNTTTDGASSKEYLQNLFDCLIRL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V KE  ++ ++  IE L++ER    K K F+ AD IR +L +KG IL+D +  
Sbjct: 405 TDVLGIIVDKE--DEILASDIEALIEERQAARKAKNFARADEIRDELLAKGIILKDTREG 462

Query: 449 DNGQR 453
              ++
Sbjct: 463 VQWKK 467


>gi|166031083|ref|ZP_02233912.1| hypothetical protein DORFOR_00765 [Dorea formicigenerans ATCC
           27755]
 gi|166028930|gb|EDR47687.1| hypothetical protein DORFOR_00765 [Dorea formicigenerans ATCC
           27755]
          Length = 468

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 186/485 (38%), Positives = 256/485 (52%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ +K  EF  ++   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTMSKKKEEFIPLEEGKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E            I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIAKANEE------GVTAEEISQRYIEECKKDMAGMNVKPATTNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI LIQ ++  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATQEIDGMIQLIQTLMDKGYAYEKNGTVYYRTRQFKEYGKLSHKNLDDLRSGERSLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W+SPW  GRPGWH ECS MS  YLG+  DIH GG DL+
Sbjct: 173 ADEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHTECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  +  AN W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANG-KTFANYWMHNAFLNIDNRKMSKSLGNFRTVREISE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
           +   V+R  ML  HYR P++F+ + +  A+  L +      +   +              
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKSSLERIVNAVDNLNFLIKNAKDEPMTAEEA 344

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                      A   A+ +D NT  A+ A+ +L R S  N D          +  +    
Sbjct: 345 ELFAQTDSFVKAFEDAMDDDFNTADAVAAIFELVRYSNTNADAEKTKEYLGKIKDLIVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A +LG+ V K+   + ++  IEKL++ER    K K F+ AD IR +L  KG IL+D +  
Sbjct: 405 ADVLGLIVEKKE--EILAEDIEKLIEERQAARKAKDFARADAIRDELLEKGIILKDTREG 462

Query: 449 DNGQR 453
              +R
Sbjct: 463 VQWKR 467


>gi|254373761|ref|ZP_04989244.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|290954116|ref|ZP_06558737.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           URFT1]
 gi|151571482|gb|EDN37136.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 459

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458


>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
 gi|187629805|sp|A9KSM5|SYC_CLOPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
          Length = 470

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 179/493 (36%), Positives = 253/493 (51%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +   EF  +    + MYVCGPTVY++ HIGNARP++VFD + R L Y   + 
Sbjct: 1   MKIYNTLTKAKEEFIPLQEGKVSMYVCGPTVYNYIHIGNARPVVVFDTVRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E        +   I+ +  ++++KDT  L  L  T +P+
Sbjct: 60  -VNFVSNFTDVDDKIIKKANEE------GVSAHEISERYIKEYLKDTEALNVLPVTTRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI +I+ +I  GHAYE N  + F T S   YG  S++ ID+ + G R+     
Sbjct: 113 ATEEIDGMIDMIEELIEKGHAYEKNGTVYFKTRSFKQYGKLSKKNIDDLEAGARIAVADE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF+LWK     EP W +PW  GRPGWHIECS MS  YLG   DIH GG DLIFPH
Sbjct: 173 KDDPMDFVLWKPKKVGEPAWSAPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ C    E  A  W+HNGFLN++ +KMSKS GNF T+ E+          +  
Sbjct: 233 HENEIAQTECCTGKE-FAKYWMHNGFLNVDNKKMSKSEGNFFTVREIFA-------EYAP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
            V+R  +L  +YR PI+F+   +  ++  L +                            
Sbjct: 285 AVLRFFLLSVNYRSPINFSRDIIESSKNGLERIQTAVEQLHFLAKVKAEKGELSTELTES 344

Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFN 386
                     +      A+ +D NT  AI ++ ++ + S               +L    
Sbjct: 345 ESTLLKEFDALIKKFEDAMDDDFNTADAISSIFEMVKLSNTYVTVESSVEMIQKVLSNIT 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               ILG+E  K+   + +   IE+L+ +R    K K F+ +D IR  L  KG ILED +
Sbjct: 405 TFCDILGLETEKKA--EILDEEIEQLIADRQSARKAKDFAKSDEIRNLLLEKGIILEDTR 462

Query: 447 NPDNGQRMTRWKQ 459
                    +WK+
Sbjct: 463 ------EGVKWKR 469


>gi|77917718|ref|YP_355533.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|109894916|sp|Q3A8C9|SYC_PELCD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 481

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 190/501 (37%), Positives = 264/501 (52%), Gaps = 67/501 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNT+  +  EF+ + P  + MYVCG TVYD+ HIG+AR  +VFD++YR L++   
Sbjct: 1   MSLRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN TD+DDKII+RA +         +   +  +  Q F +D  RL    PT Q
Sbjct: 61  D--VTYVRNYTDVDDKIIKRANER------GISSDTLAGEFIQAFDEDMNRLGLAEPTIQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  ++ L+Q +I  G AYE+  ++ F     P+Y   S+R +DE + G R+   
Sbjct: 113 PKATCHIDHIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL+F
Sbjct: 173 EQKRNPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI ++L+T       +
Sbjct: 233 PHHENEIAQSEGATG-KPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDILQT-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------TSTSKG 345
              V+R  +L  HYR PIDF+ Q L +A + LS++ +                 TS +  
Sbjct: 285 DPEVLRFFILTAHYRSPIDFSDQNLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGA 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNAS-------- 388
            ++     A+ +D NT +AI  L    R            KN + +    A         
Sbjct: 345 TLENVFREAMDDDFNTAAAIGHLFDAVRTINRLITEKGFRKNREKVAQVRALYDALLKLG 404

Query: 389 -----------AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                      A +  + +            IE  +++R    K K F+ AD IR +L +
Sbjct: 405 GVLGLFVSDPAAWLKQMNLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRDELAA 464

Query: 438 KGFILEDYKNPDNGQRMTRWK 458
           KG  L D      G + T WK
Sbjct: 465 KGIQLLD------GPQGTAWK 479


>gi|260462295|ref|ZP_05810503.1| cysteinyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259031789|gb|EEW33057.1| cysteinyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 482

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 251/480 (52%), Positives = 327/480 (68%), Gaps = 24/480 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            K +++YNTL R   +F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5   SKGLRLYNTLTRTKADFTPIDALNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 64

Query: 62  GEKCVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           GE  VTYVRNITD+DDKI  RA            + +N+AI  +T K   QF +D   L 
Sbjct: 65  GETHVTYVRNITDVDDKINARALRDFGDEISAGKLSLNEAIRRVTEKTADQFHRDVATLG 124

Query: 116 CLAPTHQPRATNHIP-------QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
           CL PT +PRAT  +         MI LIQ++I  GHAY A  E++FDT+S+P+YG  S+R
Sbjct: 125 CLEPTVEPRATEFVEPRADGKADMISLIQSLIERGHAYVAAGEVLFDTASMPDYGQLSKR 184

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            +DEQ+ G R+    HKKNP DF+LWK S+P EPGW SPWGRGRPGWHIECSAMS+ YLG
Sbjct: 185 NLDEQQAGARIAVDAHKKNPGDFVLWKLSSPEEPGWRSPWGRGRPGWHIECSAMSAAYLG 244

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           +VFDIHGGGLDLIFPHHENEIAQS CA   +  AN+W+HNGFL +EG+KMSKS GNF +I
Sbjct: 245 EVFDIHGGGLDLIFPHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGQKMSKSLGNFYSI 304

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKG 345
           +ELLET+ FGGR+WP  V+RLAMLMTHYREPIDF++++L EAE  L KW + +    + G
Sbjct: 305 HELLETETFGGRNWPGEVLRLAMLMTHYREPIDFSMRKLEEAENTLRKWKRAADLAPTAG 364

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILGIEVCKEH 400
            +   V+ AL +DL T +A Q L +LA E+++      +       A+   LG ++    
Sbjct: 365 QLPAKVVEALSDDLATYAAFQQLTQLAGEASEVEGHGENAAAASLKAALLFLGFDIGAAR 424

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +++     + + +  RL L+  K ++ AD IR  L ++G  L+D K+P  G+R+T W+ K
Sbjct: 425 VDE---AEVARSIARRLELIAAKNWAEADRIRDDLLAQGVQLKDGKDPVTGERVTTWEVK 481


>gi|225574357|ref|ZP_03782967.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038413|gb|EEG48659.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
           10507]
          Length = 484

 Score =  577 bits (1488), Expect = e-162,   Method: Composition-based stats.
 Identities = 181/495 (36%), Positives = 255/495 (51%), Gaps = 62/495 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+KIYNTL ++  EF  ++   ++MYVCGPTVY+  HIGNARPMIVFD   R + Y   
Sbjct: 13  EKMKIYNTLSKRKEEFIPLEEGRVKMYVCGPTVYNLIHIGNARPMIVFDTARRYMEYKGY 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDKII +A +E            I+ +  ++  KD   +     T  
Sbjct: 73  K--VNFVSNFTDVDDKIIAKANEE------GVTADEISKRYIEECKKDMEGMNVRPATTH 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
           P AT  I  M+ +IQ +I  G AY  A+  + F       YG  S + +D+ + G R   
Sbjct: 125 PLATEEIEGMVEMIQTLIDKGFAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRALQ 184

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V  +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG 
Sbjct: 185 VSGEEQKEDPLDFVLWKPRKEGEPAWPSPWCEGRPGWHIECSVMSKKYLGEEIDIHAGGE 244

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS C +  +  A  W+HNGFLN++ +KMSKS GNF T+ E+ E     
Sbjct: 245 DLIFPHHENEIAQSECCNG-KVFARYWMHNGFLNIDNKKMSKSLGNFFTVREIAE----- 298

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------- 341
              +   V+R  ML  HYR P++F+   +  ++  L +    +                 
Sbjct: 299 --QYDLQVLRFFMLNAHYRSPLNFSRDLMEASKNSLERILNGAERLRFLADGAKKIEISP 356

Query: 342 -------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPI 384
                   +K I       A+ +D NT  A+ A+ +L + +              ++  I
Sbjct: 357 QEQESLNEAKKIYVSKFEEAMDDDFNTADALAAVFELVKFANTQINEESSKGYVVEVYAI 416

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 +LG+ + KE   + +   IE+L+ ER    KMK F+ AD IR QL + G ILED
Sbjct: 417 LKQLCDVLGLIIEKEK--EVLDEDIERLIAERQAARKMKNFAKADEIRDQLTNMGIILED 474

Query: 445 YKNPDNGQRMTRWKQ 459
            +         +WK+
Sbjct: 475 TR------EGVKWKR 483


>gi|187931126|ref|YP_001891110.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|229558635|sp|B2SFH9|SYC_FRATM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187712035|gb|ACD30332.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 459

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 175/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNIT+IDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITNIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGNTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458


>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica ST-640]
 gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
           (cysrs) [Neisseria lactamica 020-06]
          Length = 473

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 188/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   LYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG+GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 348

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI--- 394
                         A+ +D +TV A+  L +LA E  K  N  L     A   I+G+   
Sbjct: 349 PSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQR 408

Query: 395 ---EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDT---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 475

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 188/495 (37%), Positives = 255/495 (51%), Gaps = 59/495 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN L R+  EF  + P  I  YVCGPTVYD+ HIGNARP +VFD L R + Y   
Sbjct: 1   MGLVLYNDLTRRKEEFAPVSPGRIGFYVCGPTVYDYIHIGNARPFVVFDALRRYMEYKGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV+N TDIDDK+I +A Q      +   +  +  +  + + +D   L     T  
Sbjct: 61  E--VIYVQNFTDIDDKMINKANQ------LGITVKELAEQFIEAYFEDIIPLGVRQATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  +I LI  II +GHAY  +  + FD  S PNYG  S + ++E + G R+   
Sbjct: 113 PKATEHIDDIIRLISRIIENGHAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK     EP W+SPWG GRPGWHIECSAM+  YLG   DIHGGG DLIF
Sbjct: 173 ERKRHPLDFVLWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+  A   ++    WIHNG+L +   KMSKS GN + + E+        +++
Sbjct: 233 PHHENEIAQAEAATG-KQFVRFWIHNGYLLINKEKMSKSLGNILNVREIR-------KNF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIID---- 348
               +RL +L  HYR P+DF+   L +A   L +            + S  K   D    
Sbjct: 285 QPLAVRLFILAAHYRSPLDFSDDSLIQATKSLQRLRNCYSDLLFYMERSQEKNTPDTWLE 344

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPIFN 386
                      +AL +D NT  A+ A+ ++ R+                 K+ D      
Sbjct: 345 DVVNNGYKRFCNALDDDFNTAGALGAVFEVVRDLNNYLKENETLDKQALIKSKDFFETVE 404

Query: 387 ASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               ++GI    E     + S  IE L++ER    K + F+ AD IR +L SKG ILED 
Sbjct: 405 NILGVIGINTIGEEFAGTLSSSEIEGLIKEREAARKKRDFARADAIRNELASKGIILEDT 464

Query: 446 KNPDNGQRMTRWKQK 460
                    TRWK+K
Sbjct: 465 ------PLGTRWKKK 473


>gi|291550109|emb|CBL26371.1| cysteinyl-tRNA synthetase [Ruminococcus torques L2-14]
          Length = 468

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 184/485 (37%), Positives = 254/485 (52%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ ++  EF  ++   ++MYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTMSKRKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKNYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE------GVTAEEISQRYIAECKKDMDGMNIEPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I+ +I  G+AYE N  + + T    +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEIDGMISMIETLIEKGYAYEKNGTVYYRTRKFKDYGKLSHKNLDDLQSGGRTLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP W SPWG GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  +  W+HNGFLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FSRYWMHNGFLNIDNRKMSKSLGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------DPA---- 350
           +   V+R  ML  HYR P++F+ + +  A+  L +    +     +       D A    
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKSGLERIITAADRLKFLMGSAKTEDMAETEA 344

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                         SA+ +D NT  AI A+  L +      D          L       
Sbjct: 345 EKFAKSAEYVGNFESAMDDDFNTADAIAAVFDLVKFINTMTDEDSSKEYLENLFDRLVRL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V KE  ++ +   IE L+ ER    K K F+ AD IR +L +KG +L+D +  
Sbjct: 405 TEVLGIIVDKE--DEILDSDIEALIAERQAARKEKNFARADEIRDELLAKGIVLKDTREG 462

Query: 449 DNGQR 453
              +R
Sbjct: 463 VQWKR 467


>gi|224475678|ref|YP_002633284.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254781694|sp|B9DKW3|SYC_STACT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222420285|emb|CAL27099.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 466

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 168/481 (34%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ ++P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   + 
Sbjct: 2   ITLYNTLTRQKEPFEPLEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  +  Q F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKLIKRSKE------LNESVPEIADRYIQAFYEDTGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDDIIEFIKDLVDKGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIESGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G+GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYNELGETIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNF+ +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFVLVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
            V+R  M+  HYR PI++ ++ +  A+  L +   +  +    +                
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVESAKSGLERIRNSYQAIEEREAIATDIEDQSEYIEQI 345

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                     + +D NT +AI   + LA+ + K                 +F   + +LG
Sbjct: 346 DQLLAQFEKVMDDDFNTANAITTWYDLAKLANKYVLENTTSKKVIERFKEVFQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           I +  +  ++ +   IE L++ER    K K F+ AD IR QL+++  ILED       +R
Sbjct: 406 IPLKGKQQDELLDEDIEALIEERNEARKNKDFARADEIRDQLKAQNIILEDTAQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|295096713|emb|CBK85803.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 465

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 178/487 (36%), Positives = 260/487 (53%), Gaps = 49/487 (10%)

Query: 1   MKKK-IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           M+   +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+
Sbjct: 1   MESSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRF 60

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
                 + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P
Sbjct: 61  LGYN--LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             +PRAT+HI ++I + Q +I  GHAY A+  +++F   + P YG+ SR+ +D+ + G R
Sbjct: 113 DSEPRATHHIHEIIDITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGAR 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG 
Sbjct: 173 VDVVDVKRNPMDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGS 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L      
Sbjct: 233 DLMFPHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
            + + A  +R  ++  HYR  ++++ + L +A   L +             +      + 
Sbjct: 286 -KYYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKSVPAAGGEAFEA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL 401
             +  + +D NT  A   L  +ARE  +         + L       + +LG+   +  L
Sbjct: 345 RFVEVMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDL 404

Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                   +      IE L++ RL   + K +++AD  R +L   G ILED      G +
Sbjct: 405 FLQSGAQADDGEVAEIEALIKARLEARQAKDWAAADAARNRLTEMGIILED------GPQ 458

Query: 454 MTRWKQK 460
            T W++K
Sbjct: 459 GTTWRRK 465


>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 493

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 183/510 (35%), Positives = 256/510 (50%), Gaps = 73/510 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           KK ++IYNTL +   EF   D  ++ MYVCGPT Y+F H+GNARP++ FD + R   + Y
Sbjct: 5   KKVMEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRY--FLY 62

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+N TD+DDKII RA++E            + +K   ++  D   L  L    
Sbjct: 63  KGFKVKYVQNFTDVDDKIINRAKEE------GMDPLALANKYINEYFVDADALNVLRADV 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            P+ + HI ++I LI+ +   GHAY  + ++ F   S P YG  S R +++ + G RV  
Sbjct: 117 HPKVSEHIKEIIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRNLEDMQAGARVEV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KK+P DF LWK + P EP WESPWG GRPGWHIECSAM+  YLG  FDIHGGG DLI
Sbjct: 177 DVRKKDPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLI 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   +  A  W+HNGF+ +   KMSKS GNF  + E+L+        
Sbjct: 237 FPHHENEIAQSE-ASCGKPFARYWMHNGFITINQEKMSKSLGNFFLVREILD-------K 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSKGIIDP 349
           +P  V+R  +L THYR P+DF  ++L  A   L +                S  K  +D 
Sbjct: 289 FPPDVVRWFLLSTHYRSPLDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDA 348

Query: 350 A------------VLSALYNDLNTVSAIQALHKLARESTK----------------NHDL 381
           A               A+ +D NT  AI    +L++E                     D 
Sbjct: 349 ARFKGKLAALRSEFEQAMDDDFNTALAISVFFELSKEINILVGNLGGVVTPAARQLLADA 408

Query: 382 LPIFNASAHILGIEVCKE-----------HLNKNISIAIEKLVQERLILLKMKKFSSADY 430
             +     ++LGI    +             +K +   ++ +++ R      K +++AD 
Sbjct: 409 HALVKDFNYVLGILKEDQTSGRLLLEAPAKDDKLVDALVQLIIKIRQEARGKKDWATADA 468

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           IR  L+  G ILED        +  RWK++
Sbjct: 469 IRDGLKELGIILEDT------PQGVRWKKQ 492


>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 483

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 186/494 (37%), Positives = 259/494 (52%), Gaps = 58/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K + +YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R L     
Sbjct: 10  KMLNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLCECGY 69

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +
Sbjct: 70  --PLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIE 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV  
Sbjct: 122 PKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEV 181

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL 
Sbjct: 182 DGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQ 241

Query: 242 FPHHENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFI 286
           FPHHENEIAQS  A                        W+HNGF+ ++G KMSKS GNF 
Sbjct: 242 FPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 301

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------- 338
           TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++          
Sbjct: 302 TIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPA 354

Query: 339 ---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG 393
              + S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G
Sbjct: 355 AEFELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAYLAGCLKALGGIIG 414

Query: 394 I------EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +      E  +     +   +  IE L+ +R      K ++ +D IR  L     ILED 
Sbjct: 415 LLQRDPTEFLQGGAVSDGLSNEEIEDLIAQRKQARSDKNWAESDRIRDLLNEHKIILEDN 474

Query: 446 KNPDNGQRMTRWKQ 459
                    T W++
Sbjct: 475 ------AGGTTWRR 482


>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6831682|sp|O58370|SYC_PYRHO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 476

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 189/495 (38%), Positives = 253/495 (51%), Gaps = 60/495 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL ++  EF+ I+   +RMYVCGPTVYD+ H+G+AR  I FDV+ R L +   
Sbjct: 1   MTLRIYNTLTKQKEEFKPINEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TDIDDKII RA++        +  + +  K  + F++D   L        
Sbjct: 61  --SVLMVMNFTDIDDKIIRRAKE------TGEDPAKLAEKFIKVFLEDMKALKVKPADIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HI  +I  I+ +   G+AYE ++ + F+      YG  S  K++E + G RV   
Sbjct: 113 PRVTEHIEDIIQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKLEELRKGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      E   + W+H GF+ ++G KMSKS GNF+T+ ELL       + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVHYWLHTGFVMVKGEKMSKSLGNFVTVRELL-------QRY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
              VIR  +L  HYR P+D++ + L  A+  L +   T                      
Sbjct: 285 SPEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMENAELAYTWDENDF 344

Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
               S          A+ +D NT  A++A+ +++    K                   F 
Sbjct: 345 KAYNSIKEARRKFYEAMDDDFNTAEALKAVFEVSNAINKYITEAEKPKESVLRKAWEFFR 404

Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               I GI  E  KE   K     IE L+Q R  L K +KF  AD IR++L   G  LED
Sbjct: 405 TVGEIFGIFEEYFKEEKAKEEEKLIELLIQVRAELRKERKFELADKIREELRKLGIQLED 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + T WK+
Sbjct: 465 K------GKETIWKR 473


>gi|331082990|ref|ZP_08332109.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330399727|gb|EGG79388.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 468

 Score =  577 bits (1487), Expect = e-162,   Method: Composition-based stats.
 Identities = 181/485 (37%), Positives = 261/485 (53%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +K  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R + Y   E 
Sbjct: 1   MRIYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E        +   I+S+  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIAKAVEE------GVSAEEISSRYIKECKKDMADMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ ++  G AYE N  + F   +   YG  S + +++ + G R   V  
Sbjct: 113 ATQEIDGMIDMIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 ENQKEDPLDFVLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS C +  ++ A  W+HN FLN++ RKMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSECCNG-KQFARYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTSTSKG 345
           +   V+R  ML  HYR P++F+ + +  ++  L +                  + + ++ 
Sbjct: 285 YDLQVLRFFMLNAHYRSPLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTETEK 344

Query: 346 IIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
            ++  VL        ++ +D NT  AI A+ +L + +    +          L       
Sbjct: 345 ALEVEVLEYVKKYENSMEDDFNTADAIAAIFELVKFANTKANENSTAAFVQYLFDTIVHL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           + +LG+ V KE   + +   IEKL++ER +  K K F  AD IR +L + G IL+D +  
Sbjct: 405 SDVLGLIVNKEA--EILDEEIEKLIEERQMARKEKNFKRADEIRDELAAMGIILKDTREG 462

Query: 449 DNGQR 453
              +R
Sbjct: 463 VQWKR 467


>gi|208780370|ref|ZP_03247711.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743738|gb|EDZ90041.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
          Length = 464

 Score =  576 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 249/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R   Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFNYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 412 DGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463


>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189082065|sp|A5G949|SYC_GEOUR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 494

 Score =  576 bits (1486), Expect = e-162,   Method: Composition-based stats.
 Identities = 194/514 (37%), Positives = 261/514 (50%), Gaps = 80/514 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL     +F  I+P  ++MYVCG TVYD  HIG+AR  +VFDV+YR LR    E 
Sbjct: 3   LRVYNTLTGTKEDFVPIEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYLRSLGLE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TDIDDKII RA +E        A   I+ +  ++F +D  +L  L PT QP+
Sbjct: 62  -VNYVRNYTDIDDKIINRANRE------GVAYDAISERFIKEFDRDMAQLGLLLPTSQPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I L+Q +I  G AY+   ++ F       Y   S+R +++ + G R+     
Sbjct: 115 ATEHIPEIITLVQTLIDKGFAYQMGGDVNFCVEKFDPYLKLSKRNLEDMQAGARIEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP WESPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KRHPMDFVLWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGETFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+L+        + +
Sbjct: 235 HENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEVLD-------KYDS 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            V+R  +L  HYR P+DF+ Q LTEAE  + +  +   +                     
Sbjct: 287 EVLRFFLLSAHYRSPLDFSDQNLTEAETGMERIYKALVAIDETLASNPATGGEEIDASSL 346

Query: 344 ----------KGIIDPAVLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLL 382
                      G +      A+ +D NT  A+  +  L R            S     L 
Sbjct: 347 GEAERELFDKSGSLPLRFREAMDDDFNTALAMGHIFDLVRCVNRVLSEAKERSNTLSALC 406

Query: 383 PIFNA----SAHILGIEV---------CKEHLNKNIS---IAIEKLVQERLILLKMKKFS 426
               A     A +LGI            K+     +      IE+L+ ER    K K F 
Sbjct: 407 AQVKANIGKIADVLGIFTSEPASLLTRLKDRKASELDISVEEIERLITERAAARKAKDFK 466

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +D IR  L  K  +L D        + T W  K
Sbjct: 467 RSDEIRDFLLGKNIVLLDS------AQGTSWSVK 494


>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 479

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 194/498 (38%), Positives = 257/498 (51%), Gaps = 63/498 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYN L  K   F  ++P  + MYVCGPTVY   HIG+AR ++VFDV+ R LR    
Sbjct: 1   MTLSIYNVLTGKKELFVPVNPGKVGMYVCGPTVYGPCHIGHARSVVVFDVIARYLRVAGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN TD+DDKII RA +E            I  K   +F +D   L     T +
Sbjct: 61  D--VTYVRNFTDVDDKIIHRAAEE------GKTSEQIAEKYIAEFYRDMDALFVQRATVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  ++ +IQ ++  G AYEA  ++ F   + P YG  S RK+D+ + G R+   
Sbjct: 113 PKATEHIDDILAVIQILVNKGVAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK   P EP WESPWGRGRPGWHIEC+AMSS YLG+ FDIHGGG DLIF
Sbjct: 173 KRKRNPFDFVLWKAEKPGEPSWESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   E  A  W+HNGF+ +   KMSKS  NF  INE+LE       ++
Sbjct: 233 PHHENEIAQSEAAFGRE-FARFWVHNGFVQINQEKMSKSLNNFKMINEILE-------AY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQTSTSK 344
               +RL +L +HYR PIDF+   + EA   L K                   P +    
Sbjct: 285 HPETVRLFLLSSHYRSPIDFSDTSMAEAGAGLDKLYTALGRVEALTPSGEKPSPASDGDA 344

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------PIFNASAHIL 392
           G    +   A+ +D NT  A+ AL + AR   +  D               +   S  +L
Sbjct: 345 GEYWNSFCQAMDDDFNTARAVAALFETARHINRLLDQAGDLLTADVSAHYDVMRKSGDVL 404

Query: 393 GI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           G+            +      +      I+++V +R+   K K F+ AD +RKQL     
Sbjct: 405 GLFNTPAQVYFEGRKQAAAKKDAVDPAEIDRMVAQRVAARKAKDFAKADQLRKQLTDLNV 464

Query: 441 ILEDYKNPDNGQRMTRWK 458
           +LED  +       T WK
Sbjct: 465 VLEDSPDGT-----TTWK 477


>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 466

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 180/488 (36%), Positives = 254/488 (52%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+  K  EF  I+   ++MY CGPTVY++ HIGNARP IVFDVL   L Y   E 
Sbjct: 1   MKIYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII++A +E        +   +  K   ++ KD   +     T  PR
Sbjct: 60  -VTFVQNFTDVDDKIIKKANEE------GISAIEVADKYIDEYYKDAAAIGIRKATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +I ++I  IQ++I  G AY    ++ F+      YG  S + IDE   G R+     
Sbjct: 113 VTENIKEIIGFIQDLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGARIDVNEQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK     E GW+SPWG GRPGWHIECS MS+ YLG   DIH GG DLIFPH
Sbjct: 173 KKSPLDFALWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     AN W+HNG++N++  KMSKS GNF T+ ++L       + +  
Sbjct: 233 HENEIAQSECKNGC-TFANYWMHNGYINIDNVKMSKSLGNFFTVRDVL-------KVYDG 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            V+R  ML +HYR PI+++   L  A+  L +     +S                     
Sbjct: 285 DVLRFFMLTSHYRSPINYSKDLLDSAKSSLDRIKNCKSSLDFSLQKSQDKEVSQEEKDIL 344

Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                I    +  + +DLNT  AI A+  L + +  +            +L + N    +
Sbjct: 345 ENVQAIKSTFIEKMNDDLNTADAITAIFDLVKLANTSVNENSSKTFVQSILSMLNELTAV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L I    E   +  +  IE+L++ R    K K F+ AD IR++L   G  ++D +     
Sbjct: 405 LNI-ANNEKAEEQDTSKIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTR----- 458

Query: 452 QRMTRWKQ 459
            + T+W +
Sbjct: 459 -QGTQWSK 465


>gi|77360989|ref|YP_340564.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|109894923|sp|Q3IF51|SYC_PSEHT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|76875900|emb|CAI87121.1| cysteine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 459

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 173/477 (36%), Positives = 258/477 (54%), Gaps = 46/477 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+  +F+ +    I MYVCG T+YD+ HIG+AR  + FDV+ R LR+   +  +
Sbjct: 4   IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYD--L 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITD+DDKII+RA +        ++I+ +T + T+   +D   L  L P  +P  T
Sbjct: 62  KYVRNITDVDDKIIKRANEN------GESINDLTVRMTKAMHEDFDSLNMLRPDVEPTVT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            H+ ++I +++ +I  GHAY A + +++FD S+   YG+ S++ +   + G+RV     K
Sbjct: 116 AHMDEIIEMVERLITKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
            +P DF+LWK++   EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FPHH
Sbjct: 176 DDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHH 235

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQSCCA+  +   N WIH G + +   KMSKS  NF T+ E+L       + + A 
Sbjct: 236 ENEIAQSCCANNGK-YVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KQYDAE 287

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSALY 356
            +R  ++  HYR  ++++ + L +A   L +          +               A+ 
Sbjct: 288 SVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRGVEPVACELDDNEYVIKFRKAMD 347

Query: 357 NDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------N 402
           +D NT  A+  L +LA+E     D        L  I  + + +LG+             +
Sbjct: 348 DDFNTPEALPVLFELAKELNLVKDIDSQQAGQLAFILGSISEVLGVAQQDPEAFLQGGQD 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +    IE L+ +R      K +++AD  R  L + G ILED          T W++
Sbjct: 408 DDEVAQIEALIVKRNDARASKNWAAADEARDALSALGVILEDS------AGKTTWRK 458


>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|187629846|sp|A0L4P8|SYC_MAGSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 490

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 190/504 (37%), Positives = 257/504 (50%), Gaps = 69/504 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            I IYNTL RK   F  + P  + MYVCG TVYD++HIG+AR M+VFDV+ R LR    +
Sbjct: 9   GITIYNTLGRKKEPFVPMIPGKVGMYVCGVTVYDYSHIGHARVMVVFDVIARHLRVTGFD 68

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +TYVRN TDIDDKII+RA +        ++I  +T +    F +D   L       +P
Sbjct: 69  --LTYVRNFTDIDDKIIKRANER------GESIQTLTQRYIDAFHQDMAALGVQPADIEP 120

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT H+P+M+ +I  ++  G AY +  ++ +      NYG  S + +DEQ+ G RV    
Sbjct: 121 KATEHLPEMMQMIGTLMDKGVAYASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDS 180

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK + P EP W+SPWG GRPGWHIECSAM + YLG  FDIHGGG DLIFP
Sbjct: 181 NKQNPMDFVLWKGAKPEEPQWDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFP 240

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLETKKFG 298
           HHENEIAQ+          N WIHNGF+N+     E  KMSKS GNF TI +LL      
Sbjct: 241 HHENEIAQTEGCTGQHA-VNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLAL---- 295

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
              +P  V+R  +L +HYR P+DF+   L  A+  L +                      
Sbjct: 296 ---YPGEVLRFFILNSHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPGTPIGE 352

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIF 385
                + +   +    L A+ +D NT  AI  L + A+                    + 
Sbjct: 353 PADVPAGAPQDLVENYLKAMDDDFNTPQAIAFLFEAAKMLNTAISEQKDPAVIATWARLI 412

Query: 386 NASAHILGIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
               H LG+      L             + AIE L+ ER      K ++ +D IR  L 
Sbjct: 413 RGLGHHLGLAGQDPELWFRSGIGAEQGLQAEAIEALIAERSAARAAKNWAESDRIRDTLA 472

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
            +G +LED      GQ  T+W +K
Sbjct: 473 QQGIVLED------GQHGTQWSRK 490


>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 459

 Score =  576 bits (1485), Expect = e-162,   Method: Composition-based stats.
 Identities = 171/479 (35%), Positives = 252/479 (52%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL R+   F  ++P+ + MYVCG TVYD +H+G+AR  + FDV+ R LR+   E 
Sbjct: 2   LHIFNTLTREKAPFVPLEPNKVGMYVCGITVYDLSHMGHARTYLSFDVMVRYLRHMGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA      I  N+ +S +T +      +D   L  L P  +PR
Sbjct: 61  -VKYVRNITDVDDKIIQRA------IENNETMSQLTERTVAMMHEDFAALNLLPPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +I+ ++  GHAY A+  +++FD S+  +YG+ S++ +D+ + G RV    
Sbjct: 114 VTTHMAEIIEVIEKLVAKGHAYVASSGDVLFDVSTFKDYGALSKQDLDQLQSGARVAVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP W SPWG GRPGWHIECSAM+  +LGK FDIHGGG DL FP
Sbjct: 174 GKDDPMDFVLWKKAKANEPSWSSPWGEGRPGWHIECSAMNHKHLGKHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H G + ++  KMSKS GNF T+  +LE          
Sbjct: 234 HHENEVAQSCCAFDT-PYVNTWVHTGMVQVDNEKMSKSLGNFFTLRSVLEQHHK------ 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLS 353
              +R  ++  HYR  + ++   L +A+  L +            +T    G       +
Sbjct: 287 -ETLRFFLMSAHYRSQLSYSQDNLEQAQSGLERLYTALRDVTPDSRTELGYGGYLARFEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-----EH 400
           A+ +D NT  A   L   A++  K           L  +  +   ILG          + 
Sbjct: 346 AMNDDFNTPIAFSVLFDCAKDLNKAKSTDPAEASRLAQVLISLGAILGCLQDDPVNFLQS 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  A+  L+ +R      K + +AD  R  L + G ++ED          T W++
Sbjct: 406 DADIDGEAVAALIAQRNQARADKDWGAADAARDALTAMGVVIEDSAT------GTTWRK 458


>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082064|sp|B0U0I3|SYC_FRAP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
          Length = 459

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 248/478 (51%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  K  EF+ I+P+ I+MYVCG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRNITDIDDKII+RA +        +    +  +  +       +L  L PT +PRAT
Sbjct: 61  TFVRNITDIDDKIIKRANEN------GETTDKLVERTIKSMHDAFDKLNILRPTKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+MI +I+ ++  G AY+  N ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 QTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TINE++E        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           VIR  +  T YR  I+++ + L  A   + +                      +   + A
Sbjct: 287 VIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDASEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDIEEYFKQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +      IEKL+ ER    K K ++ AD IR  L+++G ILED          T WK+
Sbjct: 407 DGIDVSEIEKLIAERTQAKKDKNYARADEIRNDLQNQGIILEDSAT------GTTWKK 458


>gi|210608929|ref|ZP_03288066.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
 gi|210152846|gb|EEA83852.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
          Length = 476

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 186/491 (37%), Positives = 259/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 9   MKLYNTLSRRKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E        + + I+ +   +  KD   +     T  P 
Sbjct: 68  -VNFVSNFTDVDDKIIKKAIEE------GVSANEISQRYIAECKKDMAGMNVKPATKHPL 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ +I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 121 ATEEICGMIEMIQELIDKGYAYEKNGTVYFRTRKFDEYGKLSHKNLDDLQSGGRSLLVSG 180

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG   DIH GG DL+
Sbjct: 181 EDEKEDPLDFVLWKPKKEGEPAWESPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 240

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 241 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFRTVREISE-------Q 292

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
           +   V+R  ML  HYR P++F+   +  ++  L++      +   ++ A           
Sbjct: 293 YDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLTRIVTAVDNLKHLENATSAEAMTDVEK 352

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                         +A+ +D NT  AI ++ +L + +               L  +    
Sbjct: 353 ETFEKTKEFVEGFETAMEDDFNTADAIASIFELVKFANTTATAESSKEYLKGLHDLIVKL 412

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A +LG+ V KE   + ++  IEKL++ER    K K F  AD IR +L  KG ILED +  
Sbjct: 413 ADVLGLIVEKEE--ELLAEDIEKLIEERQAARKEKNFKRADEIRNELLEKGIILEDTR-- 468

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 469 ----EGVKWKR 475


>gi|224369425|ref|YP_002603589.1| CysS2 [Desulfobacterium autotrophicum HRM2]
 gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
          Length = 477

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 184/497 (37%), Positives = 252/497 (50%), Gaps = 63/497 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNT  R    F  ++ + ++MYVCGPTVYD +HIG+AR ++VFDV++R LR+   
Sbjct: 1   MSLRIYNTQTRTKETFIPLEKNKVKMYVCGPTVYDTSHIGHARSVVVFDVVFRWLRHSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           + C  YVRN TD+DDKII RA +      +      I+ +  ++F  +   L  L PT +
Sbjct: 61  DVC--YVRNFTDVDDKIINRANE------LGQDPKEISERYIKEFHNEMDALNVLRPTIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT HI  +I  IQ +I  G AY     ++ F   S   YG  S R  D+   G+R+  
Sbjct: 113 PKATEHIQDIIDFIQRLIDKGKAYHVPGSDVFFSIQSFDEYGKLSGRNPDDMMPGSRIAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK   P EP W SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLI
Sbjct: 173 DDKKRDPKDFTLWKPVKPGEPSWPSPWGDGRPGWHIECSAMSYKYLGESFDIHGGGKDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   +     WIHNGF+++   KMSKS GNF  I ++L       + 
Sbjct: 233 FPHHENEIAQSEAAFG-KTFVRYWIHNGFVDINNEKMSKSLGNFTMIKDVL-------KD 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------SKGIIDP 349
           +   V+R+ +L  HYR PID+    + E    L +                    G    
Sbjct: 285 YHPEVMRMFLLSKHYRSPIDYNDTSMDEVISGLDRLYAFVERAQGAGATVNGVEPGKEWA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFNASAHILG 393
           +  +A+ +D NT  A+  L    +   +  D                L         ILG
Sbjct: 345 SFEAAMDDDFNTARAMATLFDTVKTGNRILDQQGETVSPETLSAVSTLCADLKRMGSILG 404

Query: 394 IEVCKEH-----------LNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           I   +               K++   AIE+L+QER+   + K F+ AD IR +L++   +
Sbjct: 405 ILAQEPQDYFRAKKESGLAGKDLDGDAIERLIQERVAARQSKNFARADEIRAELDAMNIV 464

Query: 442 LEDYKNPDNGQRMTRWK 458
           LED      G   T WK
Sbjct: 465 LED------GPDGTTWK 475


>gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 473

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 191/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 348

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVC 397
                         A+ +D +TV A+  L +LA E  K  N  L     A   I+G+   
Sbjct: 349 PSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQR 408

Query: 398 K--EHLNKNIS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E L   ++        IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|288550004|ref|ZP_05968971.2| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
 gi|288316405|gb|EFC55343.1| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 465

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 174/487 (35%), Positives = 259/487 (53%), Gaps = 49/487 (10%)

Query: 1   MKKK-IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           M+   +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+
Sbjct: 1   MESSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRF 60

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
                 + YVRNITDIDDKII+RA +        ++   +  +   +   D   L    P
Sbjct: 61  LGYN--LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHNDFDALNIQRP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             +PRAT+HI ++I + + +I  GHAY A+  +++F   + P YG  SR+ +++ + G R
Sbjct: 113 DSEPRATHHIHEIIDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLEQLQAGAR 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LGK FDIHGGG 
Sbjct: 173 VDVVDVKRNPMDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGS 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L      
Sbjct: 233 DLMFPHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
            + + A  +R  ++  HYR  ++++ + L +A   L +             +      + 
Sbjct: 286 -KYYDAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVPAAGGEAFEA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK--- 398
             +  + +D NT  A   L  +ARE  +         + L       + +LG+   +   
Sbjct: 345 RFVEVMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDA 404

Query: 399 -----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                   ++     IE+L++ RL   + K +++AD  R +L   G ILED      G +
Sbjct: 405 FLQSGAQADEGEVAEIEQLIKARLEARQAKDWAAADAARNRLTEMGIILED------GPQ 458

Query: 454 MTRWKQK 460
            T W++K
Sbjct: 459 GTTWRRK 465


>gi|42779170|ref|NP_976417.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|61216251|sp|Q73FB7|SYC_BACC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|42735085|gb|AAS39025.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 465

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|260589563|ref|ZP_05855476.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540131|gb|EEX20700.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 468

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 181/485 (37%), Positives = 260/485 (53%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +K  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R + Y   E 
Sbjct: 1   MRIYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E        +   I+S+  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIAKAVEE------GVSAEEISSRYIKECKKDMADMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ ++  G AYE N  + F   +   YG  S + +++ + G R   V  
Sbjct: 113 ATQEIDGMIDMIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 ENQKEDPLDFVLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS C +  ++ A  W+HN FLN++ RKMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSECCNG-KQFARYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTSTSKG 345
           +   V+R  ML  HYR P++F+ + +  ++  L +                  + +  + 
Sbjct: 285 YDLQVLRFFMLNAHYRSPLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTAEEK 344

Query: 346 IIDPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
            ++  VL        ++ +D NT  AI A+ +L + +    +          L       
Sbjct: 345 ALEAEVLEYVKKYENSMEDDFNTADAIAAIFELVKFANTKANENSTAAFVQYLFDTIVHL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           + +LG+ V KE   + +   IEKL++ER +  K K F  AD IR +L + G IL+D +  
Sbjct: 405 SDVLGLIVNKEA--EILDEEIEKLIEERQMARKEKNFKRADEIRDELATMGIILKDTREG 462

Query: 449 DNGQR 453
              +R
Sbjct: 463 VQWKR 467


>gi|301155906|emb|CBW15375.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 459

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 183/480 (38%), Positives = 262/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +D+ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                      A   A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVALGGENFVEAFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L       A ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELAGILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GPNGTTWRKQ 459


>gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 469

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 176/483 (36%), Positives = 265/483 (54%), Gaps = 48/483 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  +F+ +DP N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +    
Sbjct: 2   LQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA +          I  +T +      +D+ +L  L P  +P+
Sbjct: 60  PLTYVRNITDIDDKIIKRANER------GITIQELTEEFITAMNEDSDKLGVLRPDVEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIPQMI +I+++I +G AY A N ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATEHIPQMIQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVDT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W SPWG+GRPGWHIECSAM     G+ FDIHGGG DL FP
Sbjct: 174 NKRDPLDFVLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADR-----------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           HHENEIAQSC A             I+     W+HNGF+ ++  KMSKS GNF TI ++L
Sbjct: 234 HHENEIAQSCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDVL 293

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------S 341
                  + +   V+R  +L  HYR P++++   L +A+  L++   T           +
Sbjct: 294 -------KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFELT 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCKE 399
            +         +A+ +D  T  A+  L +LA E+ K  + +      A   +LG+   + 
Sbjct: 347 ENTNEYTRKFFAAMNDDFGTAEAMSVLFELANEANKHNSAEFAGCLKALGGMLGLLQEEP 406

Query: 400 HL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     +   +  I +L+ +R    + K ++ +D IR  L +   I++D  +    
Sbjct: 407 QAFLQSGASDDGLSADEINELIAQRKTARETKNWAESDRIRDVLAAHKIIVKDSADGTTW 466

Query: 452 QRM 454
            R 
Sbjct: 467 TRG 469


>gi|291546868|emb|CBL19976.1| cysteinyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 469

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 182/486 (37%), Positives = 260/486 (53%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ++   ++MYVCGPTVY+  HIGNARPMI+FD + R + Y   E 
Sbjct: 1   MKIFNTLTRRKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTVRRYMEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        +   I+++  ++  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVSAEEISTRYIKECKKDMADMNVKPATTAPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ +I  G+AY A +  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIQGMIDMIQTLIDKGYAYPAADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLKVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPSWPSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS C +  +  A  W+HNGFLN++ RKMSKS GNF T+ ++       G 
Sbjct: 233 IFPHHENEIAQSECCNG-KIFARYWMHNGFLNIDNRKMSKSLGNFRTVRQI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
            +   V+R  ML  HYR P++F+   +  A+  L +  + +           ++ I +  
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMEAAKNSLERILEAAGKLSDRKDNGAAENITEEE 344

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
                          +A+ +D NT  A+ A+ +L + +  N D          L      
Sbjct: 345 LALLKEAEGFVAKFEAAMDDDFNTADALAAIFELVKFANTNVDENSSREFAGGLYEELFK 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + +LG+++ K+   + +   IE L+QER    K K F  AD IR +L  KG IL+D + 
Sbjct: 405 LSDVLGLKIEKKE--EILDKEIEDLIQERQAARKAKDFQRADEIRDELLKKGIILKDTRE 462

Query: 448 PDNGQR 453
               QR
Sbjct: 463 GVKWQR 468


>gi|196047745|ref|ZP_03114944.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225862142|ref|YP_002747520.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|254765177|sp|C1ET19|SYC_BACC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|196021423|gb|EDX60131.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225788057|gb|ACO28274.1| cysteine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 465

 Score =  576 bits (1484), Expect = e-162,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|322381145|ref|ZP_08055148.1| cysteinyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154721|gb|EFX46992.1| cysteinyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 461

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 173/485 (35%), Positives = 253/485 (52%), Gaps = 55/485 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++NT+ R+  EF+ + P  + MYVCGPTVY++ HIGN RP I FDV++R L Y   +  V
Sbjct: 1   MFNTMTREKEEFKPVVPGKVSMYVCGPTVYNYIHIGNGRPAIFFDVVHRYLTYLGYD--V 58

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYV N TD+DDK+I +A +        + +  +  +  + +++D   L        PR T
Sbjct: 59  TYVVNFTDVDDKLIRKAEE------TGETVKELADRFIEAYLEDMEALGIRKADINPRVT 112

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            ++ ++I  I++++  G+AYE   ++ + T    +YG  S + +DE + G R+     K+
Sbjct: 113 ENMDEIISFIRSLVDKGYAYENGGDVFYRTQKFADYGKLSHQNLDELQYGIRIEVDERKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF+LWK + P E  W SPWG GRPGWHIECSA+   YLG+  DIHGGG+DL FPHHE
Sbjct: 173 NPQDFVLWKAAKPGEVYWSSPWGNGRPGWHIECSALVHKYLGETIDIHGGGVDLTFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            EIAQ+      +  A  W+HN FLN++  KMSKS GN + + E+L+  K         V
Sbjct: 233 CEIAQTEALTC-KPMAKYWLHNAFLNIDNEKMSKSLGNGVLVREILKRVK-------PQV 284

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------------------I 346
           +RL M+M HYR  I+F    L +A   L +   + T+                       
Sbjct: 285 LRLFMMMAHYRNQINFNSDGLEQAANGLERIMNSVTNLKHRLKIAQEGPADEQVKNRIQA 344

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
           I     + + +D NT  AI A+ +L  E+                LL  F +   +LGI 
Sbjct: 345 IKAQFEAKMNDDFNTPDAITAVFELVSEANNTLKEERVNVSTLEMLLDQFKSFDTVLGIL 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +E     +   IEKL+ ER    + K ++ AD IR  L  KG +LED        +  
Sbjct: 405 EPEE--TDLMDEEIEKLIAERTEARRAKNWARADEIRDILTEKGILLEDT------PQGI 456

Query: 456 RWKQK 460
           RW+QK
Sbjct: 457 RWRQK 461


>gi|325661900|ref|ZP_08150521.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
 gi|325471878|gb|EGC75095.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
          Length = 468

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 188/486 (38%), Positives = 256/486 (52%), Gaps = 54/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K  EF  ++   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKLYNTLTKKKEEFVPLEEKKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +EH       +   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEEHV------SAEEISQRYIAECKKDMEGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 113 ATQEIDGMIEMIGQLIEKGYAYEKNGTVYFRTRKFGPYGKLSHKNLDDLRSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG   DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREIAE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------ 349
           +   V+R  ML  HYR P++F+ + +  ++  L +    + +   +              
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMAASKNGLERIITAAENLKYLAANAKNGEMTDAEK 344

Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                      A   A+ +D NT  AI A+ +L + +    D          LL      
Sbjct: 345 AQIQETEKFVTAFEEAMEDDFNTADAIAAIFELVKFANTTADETSSQAYDSALLERIVHL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           + +LGI V KE   + ++  IE L++ER    K K F  AD IR +L  KG ILED +  
Sbjct: 405 SDVLGIIVVKEE--ELLAEDIEALIEERQAARKAKNFQRADEIRNELLEKGIILEDTREG 462

Query: 449 DNGQRM 454
              +R+
Sbjct: 463 VKWKRV 468


>gi|225026000|ref|ZP_03715192.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
 gi|224956650|gb|EEG37859.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
          Length = 464

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 187/487 (38%), Positives = 253/487 (51%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF  +    + MYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTLTKQKEEFVPVHEGKVGMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E          S I+ +   +  KD   L     TH P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEEGVPA------SEISERFIAECKKDMEGLNIEPATHNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI +I  +I  G+AYE N  + F T    NYG  S++ +D+ + G R+     
Sbjct: 113 ATEEIDGMIAMISTLIEKGYAYEKNGTVYFRTRKFKNYGQLSKKNLDDMRAGIRIAVSDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF+LWK     EP W SPWG GRPGWHIECS MS  Y+G   DIH GG DL+FPH
Sbjct: 173 KEDAMDFVLWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  EK AN W+HN FLN++ +KMSKS GNF T+ E+ E        +P 
Sbjct: 233 HENEIAQSEACN-DEKFANYWMHNAFLNIDNKKMSKSAGNFFTVREISE-------KYPL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------PQTS 341
            VIR  ML  HYR P++F+   +  ++  L +                         +  
Sbjct: 285 QVIRFFMLSAHYRSPLNFSDTLVEASKNGLERILTAIDHLREVIAAAPEGELNVEDQKNL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHIL 392
                +     +A+ +D NT  AI A+ +L + +    +         LL I      IL
Sbjct: 345 EEANALKAKYEAAMEDDFNTADAIAAIFELVKLANVTAESGSKAYAQQLLDIIVQLCDIL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI    E   + +   IE L++ER    K K F+ AD IR  L  KG ILED +      
Sbjct: 405 GI--ITEKKEELLDDDIEALIEERQAARKAKNFARADEIRDLLADKGIILEDTRA----- 457

Query: 453 RMTRWKQ 459
              +WK+
Sbjct: 458 -GVKWKR 463


>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|109894893|sp|Q47XL5|SYC_COLP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 469

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 167/489 (34%), Positives = 245/489 (50%), Gaps = 56/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   F  I+   + +YVCG TVYD  HIG+ R  I FD + R LR+   + 
Sbjct: 2   LQIYNTLSRQKETFTPINAGKVGLYVCGCTVYDLCHIGHGRTYISFDNIARYLRFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD++DKII RA +       N+    +T +      +D   L    P  +PR
Sbjct: 61  -VNYVRNITDVEDKIINRANEN------NETTEALTERTIAAMHQDFDSLNMARPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN--------NEIIFDTSSIPNYGSFSRRKIDEQKMG 176
            T H+ ++I +I+ ++   HAY A          +++FD SS  +YG  S + +++ + G
Sbjct: 114 VTTHMNEIIAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQNLEQLQSG 173

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           +RV    +K NP DF+LWK + P EP W SPWG GRPGWHIECSAM++  LG  FDIHGG
Sbjct: 174 SRVEVDQNKNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHGG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENEIAQSCCA       N W+H G + ++  KMSKS GNF TI ++L    
Sbjct: 234 GSDLTFPHHENEIAQSCCALNT-PYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLA--- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KG 345
                + A  +R  +   HYR  ++++   LT+A   + +   +                
Sbjct: 290 ----QYDAETVRFFLTTGHYRSQLNYSTDNLTQARASVERIYTSLRDVNIESDYVINKDS 345

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHILGIE- 395
                   A+ +D NT  A+  L ++++E              DL     A   I+G+  
Sbjct: 346 SFVKQFCQAMDDDFNTPQALAVLFEISKELNVAKAAANNALAIDLASTLVALGEIVGLLQ 405

Query: 396 -----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +   + +    IE L+ +R      K ++ AD  R +L +   +LED      
Sbjct: 406 LDPAAFLQGDNDNDEVAIIEALIVQRNQARIDKDWAMADDARDKLNAMNIVLEDS----- 460

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 461 -AGKTTWRK 468


>gi|331085695|ref|ZP_08334778.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
 gi|330406618|gb|EGG86123.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
          Length = 468

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 189/491 (38%), Positives = 257/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K  EF  ++   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKLYNTLTKKKEEFVPLEEKKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +EH       +   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEEHV------SAEEISQRYIAECKKDMEGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 113 ATQEIDGMIEMIGQLIEKGYAYEKNGTVYFRTRKFGPYGKLSHKNLDDLRSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG   DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREIAE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------ 349
           +   V+R  ML  HYR P++F+ + +  ++  L +    + +   +              
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMAASKNGLERIITAAENLKYLAANAKNGEMTDAEK 344

Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                      A   A+ +D NT  AI A+ +L + +    D          LL      
Sbjct: 345 VQIQETEKFVTAFEEAMEDDFNTADAIAAIFELVKFANTTADETSSQAYDSALLERIVHL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           + +LGI V KE   + ++  IE L++ER    K K F  AD IR +L  KG ILED +  
Sbjct: 405 SDVLGIIVVKEE--ELLAEDIEALIEERQAARKAKNFQRADEIRNELLEKGIILEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKR 467


>gi|297717798|gb|ADI50042.1| cysteinyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
           L13]
          Length = 452

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 206/470 (43%), Positives = 279/470 (59%), Gaps = 36/470 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R+  +F  +DP++I+MYVCGPTVYDFAHIGNARP++VFD+L RLLR  Y   
Sbjct: 3   LKVYNTYSRQKEDFVPLDPTHIKMYVCGPTVYDFAHIGNARPVVVFDILSRLLRQLY--P 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI   A+           I  IT +  Q + +D   LA  AP   PR
Sbjct: 61  KVTYVRNITDVDDKINAAAKAS------GQTIRTITERTIQAYNEDMAALAAFAPDVTPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HIP+MI++I+++I +GHAY A   ++F   +   YG  SRR  DE   G RV    +
Sbjct: 115 ATDHIPEMIHMIEDLIANGHAYAAEGHVLFAVKTFGAYGKLSRRNHDELLAGARVEIAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS  YLGK FDIHGGG+DL FPH
Sbjct: 175 KRDPGDFVLWKPSDAETPGWDSPWGRGRPGWHIECSAMSEKYLGKTFDIHGGGIDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQSCCA++ +  A  W+HNG L + G KMSKS GNF T+ ELL         +  
Sbjct: 235 HENELAQSCCANKTDYFAKYWMHNGHLTVNGEKMSKSLGNFYTVRELLS-------EFTG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIIDPAVLSALYNDLN 360
             +R  ++  HYR+P+D + + + + +  L +           +G ID  ++SAL +DLN
Sbjct: 288 ESLRYMLMSAHYRQPLDLSKELIHQCQASLDRLYGALRGIKVYEGGIDDQMMSALLDDLN 347

Query: 361 TVSAIQALHKLARESTKNHD------LLPIFNASAHILGI-----EVCKEHLNKNISIAI 409
              A+  LH+LA  + K  D      L     AS ++LGI     E   +      +  +
Sbjct: 348 VPLALARLHELATATNKAEDPQQKSQLASTLKASGYLLGILQQDPEAWFKGATLANADEV 407

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           E L+ +R      + F+ AD +R+QL   G +LED          T W++
Sbjct: 408 EALIAQRNQARSARDFAKADSLRQQLTDMGIVLEDS------PAGTTWRR 451


>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 466

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 167/489 (34%), Positives = 258/489 (52%), Gaps = 57/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y   + 
Sbjct: 1   MKLFNTMTRQKEEFKPIKDGQVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E      N  +  +  +  Q++ KD   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIQEYYKDADGLNIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++ ++I  ++++I  G+AYE N ++ F+T     YG  S + +D+ + G R+     
Sbjct: 113 ATEYMDEIIEFVRDLIDKGYAYEVNGDVYFNTKQFKEYGKLSGQNLDDLQAGARISIDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W+ PWG+GRPGWHIECS M+   LG   DIH GG DL+FPH
Sbjct: 173 KKDPMDFAIWKSEKPGEPSWDCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +  A+ W+H+ +LN++ +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARNG-KAFAHYWMHSAYLNIDNKKMSKSLNNFFTTREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+RL ML  HYR P++F+ + L  A+    +      +   +   V             
Sbjct: 285 EVVRLFMLSAHYRTPLNFSNELLQSAKASNERLYNAIGNLERLLDEVKIDKITEDEKEYV 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L ++   N +           L +       
Sbjct: 345 KNLNSYKEKYIEKMDDDFNTADAIAVIFDLVKDINTNINTESSKELVEYSLELIRELGKP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI      L+  ++  IEKL+++R    K + ++ AD IR  L+++G +LED       
Sbjct: 405 LGILQKSTILD--LNTEIEKLIEQRQQARKDRDWALADKIRDDLKARGIVLEDT------ 456

Query: 452 QRMTRWKQK 460
            +  RWK++
Sbjct: 457 PQGVRWKKE 465


>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511834|sp|C6E7P0|SYC_GEOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
          Length = 480

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 196/502 (39%), Positives = 261/502 (51%), Gaps = 66/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL     EF  I+P  + MYVCG TVYD  HIG+AR  +VFD++YR L     
Sbjct: 1   MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN TDIDDKII RA ++        A + I+ +  ++F  D  RL    PT Q
Sbjct: 61  E--VTYVRNYTDIDDKIINRANRD------GVAYNEISERFIKEFDNDMARLMLQLPTFQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HIP++I L+Q +I  G AY++ +++ +       Y   S+R +++ + G R+   
Sbjct: 113 PKATEHIPEIINLVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+  DIHGGG DLIF
Sbjct: 173 ERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+LE       S+
Sbjct: 233 PHHENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILE-------SY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPA------ 350
            A V+R  +L  HYR PIDF+ Q L EAE+ L +  +         + G   PA      
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALAGIDERLASGAHTPADADNTE 344

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
                         A+ +D NT  A+  L  L R   +            +       A 
Sbjct: 345 FAEKVAGFAGRFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEKVKAEVAKMAA 404

Query: 391 ILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +LGI            +  K    +  +  IE L+ ER    K K F   D IR  L  K
Sbjct: 405 VLGICDSVPAAFLQRMKDRKTSDMEMSAEEIETLIAERAEARKAKNFKRGDEIRDLLLEK 464

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
             +L D        + T WK K
Sbjct: 465 NIVLLDS------AQGTTWKVK 480


>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
 gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
          Length = 480

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 190/502 (37%), Positives = 260/502 (51%), Gaps = 66/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL     EF  I+P  + MYVCG TVYD  HIG+AR  +VFD++YR L+    
Sbjct: 1   MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN TDIDDKII RA ++            I+ +  ++F  D  RL    PT Q
Sbjct: 61  E--VTYVRNYTDIDDKIINRANRDGVPYN------EISERFIKEFDSDMARLMLRIPTFQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT H+P++I L+Q +I  G AY++ +++ +       Y   S+R +++ + G R+   
Sbjct: 113 PKATEHVPEIIALVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+  DIHGGG DLIF
Sbjct: 173 DKKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +     W+HNGF+N+   KMSKS GNF TI E+LE        +
Sbjct: 233 PHHENEIAQSEAASG-KPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEVLER-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
            A V+R  +L  HYR PIDF+ Q L EAE+ L +  +  +                    
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATEESAE 344

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----HDLLPIFNA----SAH 390
                  I    + A+ +D NT  A+  +  L R   +       +LL          A 
Sbjct: 345 LEEKCSAIATRFIEAMDDDFNTAMALGHIFDLVRSINRALPVSPLELLKRVKEEVARIAA 404

Query: 391 ILG---------IEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            LG         ++  K+     +      IE L+ ER    + K F  +D IR  L  K
Sbjct: 405 TLGVCDSVPAAFLQRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEK 464

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
             +L D        + T WK K
Sbjct: 465 DIVLLDT------PQGTTWKVK 480


>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
 gi|254781683|sp|C1D7F5|SYC_LARHH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
          Length = 457

 Score =  575 bits (1483), Expect = e-162,   Method: Composition-based stats.
 Identities = 187/477 (39%), Positives = 263/477 (55%), Gaps = 44/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   FQ I P  + MYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I+++T +      +D   L    P  +PR
Sbjct: 61  -LTYVRNITDIDDKIIRRAAEN------GEPINVLTQRFIDAMDEDAAALGVQKPNFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +P MI +I+ +I  G AY A N ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATQFVPDMISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVDP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W SPWG+GRPGWHIECSAM+ HY G  FDIHGGG DL FP
Sbjct: 174 NKRDPMDFVLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE        + 
Sbjct: 234 HHENEIAQSEGAHDCK-FVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----------VL 352
           A V+R  +L  HYR P++++   L +A   LS+      +    D A             
Sbjct: 286 AEVVRFFILRAHYRSPLNYSDAHLEDARSALSRLYTALKNVPAADVALDWEANDYARRFR 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCK-------EHLNK 403
           +A+ +D NTV A+  L +LA E+ K+   +L         +LG+             L  
Sbjct: 346 AAMDDDFNTVEAVAVLFELAGEANKSRSAELAGWLKTLGGVLGLLQRDPVDFLQGGSLEG 405

Query: 404 NISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IS   +E+L+  R      K ++ +D IR +L ++G +LED      G   T W++
Sbjct: 406 EISADEVEQLIAARKAARAGKDWAESDRIRDELIARGIVLED------GAGGTTWRR 456


>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
          Length = 465

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 254/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I ++  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIANRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|30260280|ref|NP_842657.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47525344|ref|YP_016693.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49183123|ref|YP_026375.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49481691|ref|YP_034442.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52145127|ref|YP_081701.1| cysteinyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65317550|ref|ZP_00390509.1| COG0215: Cysteinyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165873141|ref|ZP_02217757.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167635089|ref|ZP_02393406.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167641949|ref|ZP_02400184.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170689572|ref|ZP_02880758.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707565|ref|ZP_02898018.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177655593|ref|ZP_02936974.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196041797|ref|ZP_03109087.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218901292|ref|YP_002449126.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227812763|ref|YP_002812772.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229601947|ref|YP_002864741.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254684407|ref|ZP_05148267.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254733756|ref|ZP_05191471.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254756312|ref|ZP_05208341.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254758390|ref|ZP_05210417.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|300119599|ref|ZP_07057143.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|33301677|sp|Q81VV1|SYC_BACAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216160|sp|Q63HB0|SYC_BACCZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216199|sp|Q6HPS8|SYC_BACHK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735045|sp|B7JK97|SYC_BACC0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765175|sp|C3P9N5|SYC_BACAA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765176|sp|C3LJ62|SYC_BACAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|30253601|gb|AAP24143.1| cysteine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47500492|gb|AAT29168.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177050|gb|AAT52426.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|49333247|gb|AAT63893.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|51978596|gb|AAU20146.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|164711121|gb|EDR16682.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510080|gb|EDR85491.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529563|gb|EDR92313.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170127561|gb|EDS96435.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170666485|gb|EDT17262.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172080057|gb|EDT65155.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|196027417|gb|EDX66034.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|218537598|gb|ACK89996.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227004950|gb|ACP14693.1| cysteine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229266355|gb|ACQ47992.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|298723071|gb|EFI63969.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 465

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|91976542|ref|YP_569201.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|123721921|sp|Q139D9|SYC_RHOPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91682998|gb|ABE39300.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 463

 Score =  575 bits (1482), Expect = e-162,   Method: Composition-based stats.
 Identities = 220/465 (47%), Positives = 296/465 (63%), Gaps = 18/465 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL ++  +F  +DPS +RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE 
Sbjct: 3   LRLYDTLTKEKRDFAPLDPSRVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGEN 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI +RA +++P +P+N++I  +T +  +QF  D   L CL PT +PR
Sbjct: 63  HVKYVRNITDVDDKINDRAARDYPGLPLNESIRKVTEQTERQFHDDVDALGCLRPTVEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKMGT 177
           AT HI +M  +I  ++  G AY A++ ++F   ++       P YG+ + R +DE   G 
Sbjct: 123 ATEHIGEMRTIIDRLVEGGFAYVADDHVLFSPGAMNAADSVLPRYGALANRSLDEMIAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIH 234
           RV    +K++  DF+LWK S P EP W SP G   +GRPGWHIECSAMS  +LG+ FDIH
Sbjct: 183 RVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATQGRPGWHIECSAMSWKHLGETFDIH 242

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL+FPHHENE+AQSCCA    + A  W+HNGFL +EG KMSKS GNF+TI ELL T
Sbjct: 243 GGGIDLVFPHHENEVAQSCCAFHTSRMAQTWMHNGFLQVEGEKMSKSLGNFVTIRELLAT 302

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVLS 353
           +KFGGR W    +RLAML THYR+PID+T   L EAE  +  W   T  +       V++
Sbjct: 303 EKFGGRKWDGATLRLAMLKTHYRQPIDWTADALHEAEKAIFDWSDFTKDATPGSCDDVIA 362

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           AL +DLNT   I  LH L R   K  +L         +LGI         ++    + L+
Sbjct: 363 ALTDDLNTPKMIAELHALRRAG-KADELCGAM----ELLGISPVVRGT-VDLDATAKSLI 416

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             R      K F  +D IR +L + G  ++D K+ D G+ +T W+
Sbjct: 417 DARTAARARKDFKESDRIRDELAAMGIAIKDGKDSD-GKPVTTWE 460


>gi|324324079|gb|ADY19339.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 465

 Score =  574 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 467

 Score =  574 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 172/489 (35%), Positives = 267/489 (54%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL R+   FQ I+   ++MYVCGPTVY++ HIGNARP +VFD++ R L Y   
Sbjct: 1   MTIQLYNTLTRQKETFQPIEEGKVKMYVCGPTVYNYIHIGNARPAVVFDMVRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV N TD+DDKII+ A +      +++ +  +  +    +  DT  L        
Sbjct: 61  D--VTYVSNFTDVDDKIIKAANE------LDEDVMTVAERYIAAYYNDTEALGVRKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  +  +I  I  +I  G+AYE++ ++ F T     YG  S++ +D+ + G R+  +
Sbjct: 113 PRVTESMDDIITFITRLIDKGYAYESSGDVYFRTRKFDTYGQLSQQSLDDLQAGARIQVE 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   E  W SPWG GRPGWHIECSAM   +LG   DIH GG DL F
Sbjct: 173 EKKEDPLDFVLWKTAKEGEIAWSSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLSF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +  ++ AN WIHNG++N++  KMSKS  NFI +++++       R +
Sbjct: 233 PHHENEIAQSEALN-EQRMANYWIHNGYINIDNEKMSKSLNNFILVHDII-------RQF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIID--- 348
              V+R  ++  HYR PI+F+ ++L  A+  L +             +++   G  D   
Sbjct: 285 DPDVVRFFIVNAHYRSPINFSDEQLETAKTSLERIQTTYENLTYRLGESADLGGGQDKWF 344

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                     ++++ +D N+ +A+  +  L R++                 L  F+  A 
Sbjct: 345 ALIRKEGERFIASMDDDFNSANAVAVMFDLVRQANIYLTEKHTSKEVLEAFLKQFDDMAF 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI V ++   + +   +E+L++ER+   K + F+ AD IR  L+ +G ILED      
Sbjct: 405 VLGIAVKRQA--ELLDEDVEQLIEERIQARKDRDFARADEIRDSLKDQGIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -PQGTRWKR 465


>gi|327438250|dbj|BAK14615.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 467

 Score =  574 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 175/489 (35%), Positives = 261/489 (53%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R L+Y   
Sbjct: 1   MTIQIFNSLTRQKEPFIPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYLQYAGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +V N TD+DDKII+ A +      + +  S++T +    + +D T L C      
Sbjct: 61  E--VKFVSNFTDVDDKIIKAANE------LGEETSVLTDRFIAAYFEDITALGCQKADAH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+  +I  I+ +I  G+AYE+  ++ + T     YG  S + ID+ K+G R+   
Sbjct: 113 PRVTEHMDDIIEFIKVLIDKGYAYESQGDVYYRTRKFNGYGKLSHQSIDDLKVGARIEAG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  W SPWG GRPGWHIECS M+  +LG   DIH GG DL F
Sbjct: 173 EKKEDPLDFALWKAAKAGEIKWASPWGEGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNG++N++  KMSKS GNFI +N++        +  
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIR-------QQI 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI+F    +  A+  L +   + T+                   
Sbjct: 285 DPQVLRFFMLSVHYRNPINFAQDLVEAAKNGLDRIRTSYTNVAHRLTSSASLGDNSEQWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLA-------RESTKNHDLLPI----FNASAH 390
              G I     +A+ +D NT +A+ AL +L+        E+  + ++L      F+   +
Sbjct: 345 EKIGQIKVDFENAMNDDFNTANAVSALFELSHIANVYLNEANTDKEVLQAILTMFDTIGN 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI +  E     +   IE L++ER    K + F+ +D IR QL     +LED +    
Sbjct: 405 VLGIHIKVEA--GLLDEEIEALIEERNQARKNRDFARSDEIRDQLLGMDIVLEDTR---- 458

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 459 --QGTRWKR 465


>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
 gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
          Length = 463

 Score =  574 bits (1481), Expect = e-162,   Method: Composition-based stats.
 Identities = 185/484 (38%), Positives = 273/484 (56%), Gaps = 50/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+N+L ++   F  I+P  +R+YVCG TVYD+ H+G+AR MIVFDV+ R LR    E 
Sbjct: 2   LTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I+ +T +  Q   +DT  L  + P  +PR
Sbjct: 61  -VTYVRNITDIDDKIIQRANEN------GEDINQLTDRFIQAMYEDTDALNVIRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP+++ +IQ+++   +AY  +  ++ +      NYG  S + +D+ + G RV    
Sbjct: 114 ATQSIPEIVAMIQSLLDKNYAYLTDNGDVCYAIQRFENYGQLSGKHLDDLRAGERVEVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWG GRPGWHIECSAMS+H LG  FDIHGGG+DL FP
Sbjct: 174 SKQHPLDFVLWKTAKPGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N+W+HNGF+ +   KMSKS  NF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEGATG-ETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLER-------YQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLSA 354
             V+R  +L +HYR  ++++ Q L  A+  +++           D            L+A
Sbjct: 286 PEVVRYFILTSHYRSELNYSEQELEAAKQSITRLYIAIRDLPNTDEPCPDDSYNQRFLTA 345

Query: 355 LYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILG------------IEVC 397
           + +D NT  A+ AL  L++E       K  + +P+ +    +              ++  
Sbjct: 346 MNDDFNTPEALAALFSLSKEINILRRKKVSEAIPLASELRRLGNLLGLLQAKPETFLQGT 405

Query: 398 KEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +     +S+  IE+L+ ER+   K + F++AD IR  L +KG ILED        + T 
Sbjct: 406 SQEKEPGLSVTEIEQLIVERIDARKNRDFATADQIRADLTAKGIILEDN------AQGTS 459

Query: 457 WKQK 460
           W+++
Sbjct: 460 WRKE 463


>gi|153855861|ref|ZP_01996836.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
 gi|149751829|gb|EDM61760.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
          Length = 468

 Score =  574 bits (1480), Expect = e-162,   Method: Composition-based stats.
 Identities = 182/485 (37%), Positives = 253/485 (52%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ +K  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTMTKKKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVTADEISKRYIAECKKDMDGMNIKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +IQ +I  G AYE N  + + T    +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVDMIQTLIDKGFAYEKNGTVYYSTRKFKDYGKLSHKNLDDLRSGERSLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFRTVREISE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA- 350
           +   V+R  ML  HYR P++F+   +  ++  L +    +           ++ I D   
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERIVNAADNLKFLMENAKAEAITDAEA 344

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                          A+ +D NT  A+ A+  L +      D          L  +    
Sbjct: 345 ENFAKTEEFVAGFEKAMDDDFNTADAVAAIFDLVKYINTTTDAESSKEYLQKLFDLLVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+ V K+   + +   IEKL++ER    K K F+ AD IR +L  KG IL+D +  
Sbjct: 405 TGVLGLIVDKKE--EILDEDIEKLIEERQAARKAKDFARADAIRDELLEKGIILKDTREG 462

Query: 449 DNGQR 453
              +R
Sbjct: 463 VQWKR 467


>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 473

 Score =  574 bits (1480), Expect = e-162,   Method: Composition-based stats.
 Identities = 186/490 (37%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  I+P N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------Q 339
           +L       + +   V+R  +L  HYR P++++   L +A+  L++             +
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAVAFE 348

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408

Query: 395 ---EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAVSDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 473

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 187/492 (38%), Positives = 257/492 (52%), Gaps = 58/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR      
Sbjct: 2   LNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+
Sbjct: 60  PLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDG 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FP
Sbjct: 174 FKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI
Sbjct: 234 HHENEIAQSVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTI 293

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---- 344
            E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +     
Sbjct: 294 REVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAK 346

Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG-- 393
                          +A+ +D  TV A+  L +LA E  K +D  L     A   I+G  
Sbjct: 347 FDLFENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLL 406

Query: 394 ----IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               IE  +     +   +  I+ L+  R      K ++ +D IR  L     ILED   
Sbjct: 407 QRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN-- 464

Query: 448 PDNGQRMTRWKQ 459
                  T W++
Sbjct: 465 ----AGGTTWRR 472


>gi|328675472|gb|AEB28147.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 459

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 254/478 (53%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +P+AT
Sbjct: 61  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+MI +I+ +I  G+AY+ AN ++ +  S   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMIAMIETLIEKGYAYQGANGDVFYRVSKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPIDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + K   T                  +   + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVEKLFNTLRDIEPVEVNLPDDASEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEV--CKEHLNKN 404
           + ND NT  A+  L  LA+E          K      +      +LGI     +E+  + 
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406

Query: 405 ISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            S+    IE+L+ ER    K K +  AD IR QL+ +G ILED          T WK+
Sbjct: 407 DSVDVGEIERLIVERTQAKKDKNYLRADEIRNQLQEQGIILEDSAT------GTTWKK 458


>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 473

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/489 (38%), Positives = 257/489 (52%), Gaps = 58/489 (11%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +T
Sbjct: 5   YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PLT 62

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           YVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT 
Sbjct: 63  YVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKATE 116

Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K+
Sbjct: 117 NIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL FPHHE
Sbjct: 177 DPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236

Query: 247 NEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           NEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E+
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA- 350
           L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP  
Sbjct: 297 L-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPMP 349

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI---- 394
                        A+ +D +TV A+  L +LA E  K  N  L     A   I+G+    
Sbjct: 350 SEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRD 409

Query: 395 --EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             E  +     +   +  I+ L+  R      K ++ +D IR  L     ILED      
Sbjct: 410 PTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDT----- 464

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 465 -AGGTTWRR 472


>gi|47569824|ref|ZP_00240494.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553517|gb|EAL11898.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 465

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 254/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+++  ILED      
Sbjct: 405 ILGLELAQEDL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKNRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|239625541|ref|ZP_04668572.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239519771|gb|EEQ59637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 469

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 184/492 (37%), Positives = 256/492 (52%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  + P  ++MYVCGPTVY+  HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRRKEEFVPLTPGEVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            ++ +  ++  KD   +     T  P+
Sbjct: 60  -VKYVSNFTDVDDKIIKKAIEE------GVDADTVSQRYIEECKKDMAAMNVKPATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +IQ +I  GHAY A +  + F T S   YG  S + +DE + G R   V 
Sbjct: 113 ATQEICGMLEMIQTLIDKGHAYVAKDGTVYFRTGSFKEYGKLSHKNLDELQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P+DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEGKEDPSDFVLWKPKKEGEPFWESPWCNGRPGWHIECSVMSKRYLGEQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSECAN-DKPFATYWMHNAFLNIDNKKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTSTS 343
            +   V+R  ML  HYR P++F+   +  ++  L +                   QT   
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTCVDKLRDLEAKAEGAAQTCAE 344

Query: 344 KGIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
           +G ++ A         A+ +D NT  AI  + +L + +    D          L      
Sbjct: 345 QGSMEEAGKLLGRFEEAMDDDFNTADAISVVFELVKLANTTADSGSTKAYVSFLKKNIEQ 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI    E   + +   IE+++  R    K K F+ AD IR +L   G +LED + 
Sbjct: 405 LCDVLGI--ITEKKEEVLDSDIEEMIAARQQARKDKDFALADEIRGKLLDMGIVLEDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 473

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 LSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 408

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|110803392|ref|YP_699686.1| cysteinyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|122956489|sp|Q0SQC1|SYC_CLOPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110683893|gb|ABG87263.1| cysteine--tRNA ligase [Clostridium perfringens SM101]
          Length = 466

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 171/488 (35%), Positives = 246/488 (50%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y   + 
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +  I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEE------GITVKKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIR  ML  HYR+ ++F+   L  A+  + +      +   +   V             
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     +  + +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++    N+   IE L+ +R    K + F+ AD IR +L+ +G +LED       
Sbjct: 406 LG--MFQKSTKGNLEEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDT------ 457

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 458 PQGVRWKR 465


>gi|288554704|ref|YP_003426639.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288545864|gb|ADC49747.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 465

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 173/486 (35%), Positives = 256/486 (52%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN+L +K   F  ++   ++MYVCGPTVY++ HIGNARP IV+D++ R L Y   E 
Sbjct: 3   IQLYNSLTKKKETFVPMEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMVRRYLEYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII  A        + + +  + ++  +++  DT  L        PR
Sbjct: 62  -VEFISNFTDVDDKIIRAA------HELGEDVFAVANRFIEEYHNDTCALGVKKANKHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  IP++I  +  +I   +AYE+  ++ F T     YG  S + ID+ + G R+     
Sbjct: 115 VTETIPEIIEFVAKLIEKEYAYESGGDVYFRTKKFEGYGKLSSQSIDDLRSGARIEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  WESPWG GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKAAKEGEVSWESPWGDGRPGWHIECSAMVKKYLGDTIDIHAGGKDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  AN W+HNGF+N+   KMSKS GNF+  ++++       R   A
Sbjct: 235 HENEIAQSEALTG-KTMANYWMHNGFININNEKMSKSLGNFVLAHDII-------RQHSA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            V+R  ML  HYR PI+F+ + L  A+  L +     +S                     
Sbjct: 287 EVVRFFMLTAHYRSPINFSDELLDGAKNGLERLRTAVSSLEHRLGESADYGEKAEWLTKI 346

Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
             +  A +  + +D N+ + I  +  LA+E+ +            H  + +F+  A +LG
Sbjct: 347 SQLKEAFIKEMDDDFNSANGIAVMFDLAKEANRYLREEQTSKEVLHAFIDLFDELADVLG 406

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           I V  +   + +   IE L++ER    + + F  AD IR QL+ +G +LED        +
Sbjct: 407 IVVRTQA--ELLDTEIEALIEERNETRRSRNFKRADEIRDQLKDQGILLEDT------AQ 458

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 459 GVRWKR 464


>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
 gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
          Length = 477

 Score =  574 bits (1480), Expect = e-161,   Method: Composition-based stats.
 Identities = 190/493 (38%), Positives = 260/493 (52%), Gaps = 59/493 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  I+P N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N+++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ-KP 461
                T W++ KP
Sbjct: 465 --AGGTTWRRGKP 475


>gi|229542225|ref|ZP_04431285.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326645|gb|EEN92320.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 465

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/486 (35%), Positives = 255/486 (52%), Gaps = 51/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IVFD + R L +   
Sbjct: 1   MSIQIYNTLTRKKEPFIPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLAFRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A++        + +  ++ +  + + +D   L C      
Sbjct: 61  D--VNYVSNFTDVDDKLIKAAKER------GEEVPALSERFIKSYFEDIDALGCCHADAH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  I+ +I  GHAYE+  ++ + T S P+YG  S + IDE K G R+   
Sbjct: 113 PRVTENMDAIIAFIEKLIEKGHAYESGGDVYYHTRSFPDYGKLSHQSIDELKSGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GN + +++++E         
Sbjct: 233 PHHENEIAQSEALT-DKPFARYWMHNGYINIDNEKMSKSLGNIVLVHDIIERH------- 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDP--- 349
              V+R  ML  HYR PI+++ + L  A+  L +            ++S +    D    
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSEELLANAKAGLERIKTSYQNVKHRLESSANLAEDDEKWL 344

Query: 350 --------AVLSALYNDLNTVSAIQALHKLAREST-----KNHD---LLPIFNASAHILG 393
                     + A+ +D NT + I  L +L++++      KN     L         I G
Sbjct: 345 EQVRSLHRQFIEAMDDDFNTANGISVLFELSKQANYYLRGKNTTETVLRAFMKEFETISG 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +   K      +   IE L+++R    K + F  AD IR +L+S   ILED        +
Sbjct: 405 VLGLKLEEEVLLDEEIEALIEKRNEARKARNFQLADEIRDKLKSMNIILEDT------PQ 458

Query: 454 MTRWKQ 459
             RW++
Sbjct: 459 GVRWRR 464


>gi|218134243|ref|ZP_03463047.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991618|gb|EEC57624.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
           43243]
          Length = 474

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 185/494 (37%), Positives = 256/494 (51%), Gaps = 60/494 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KIYNTL  K  EF  ++   ++MYVCGPTVY+  HIGNARPMIVFD + R L Y  
Sbjct: 4   KTNMKIYNTLTAKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYLEYKG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A +E           +I+++   +  KD   +     T 
Sbjct: 64  YE--VNYVSNFTDVDDKIIKAANEE------GVTADVISTRYIAECKKDMAGMNVKPATK 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
            P AT  I  MI LIQ +I  G+AY  N  + + T     YG  S++ ID+ + G R   
Sbjct: 116 HPLATEEIDGMIELIQTLIDKGYAYNVNGTVYYRTRKFKGYGKLSKKNIDDLEAGHRDIK 175

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK     EP WESPW  GRPGWH ECS M+  YLG+  DIH GG 
Sbjct: 176 VAGGEEKEDPLDFVLWKPKKEGEPYWESPWSEGRPGWHTECSVMAKKYLGESIDIHAGGE 235

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A+ + + +  W+HN FL +   KMSKS GNF T+ ++       
Sbjct: 236 DLIFPHHENEIAQSEAANGV-QFSKYWMHNAFLKINNVKMSKSLGNFFTVRDI------- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-IIDPA------- 350
              +   V+R  ML  HYR P++F+ + +  A+  L +    + +   +ID A       
Sbjct: 288 AAKYDLQVLRFFMLSAHYRNPLNFSEELMESAKNSLERITTAAGNLNHMIDNAQDREVSE 347

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIF 385
                            +A+ +D NT  AI A+  + + +  +           D+L   
Sbjct: 348 EEKNILAQLDGMIKQFENAMDDDFNTADAITAIFDMVKLANTSCKSSDSKKFLQDVLDKI 407

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             +  ILG+EV  E   + +   I+ L+QER    K + F+ AD IR+ L  KG +LED 
Sbjct: 408 AGTCGILGLEVVSEK--ELLDEDIDNLIQERQQARKDRNFARADEIRQLLLDKGIVLEDT 465

Query: 446 KNPDNGQRMTRWKQ 459
           +         RWK+
Sbjct: 466 R------EGVRWKR 473


>gi|256823180|ref|YP_003147143.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796719|gb|ACV27375.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 465

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/486 (35%), Positives = 244/486 (50%), Gaps = 52/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN L R+   F+ ++   + MYVCG T YD  HIG+AR    FDV+ R L++   + 
Sbjct: 2   LQIYNNLTRQKEPFKPMEEGKVSMYVCGVTTYDLCHIGHARTYAAFDVINRFLKFSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        +  S +T +  Q+  +D   +    P  +PR
Sbjct: 61  -VTYVRNITDIDDKIINRANEN------GEDFSELTERFIQEMYQDFDAIGLQRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I + Q +I  G AY  +  ++ F   +  +YG  S++ + +   G RV    
Sbjct: 114 ATQTMDEIIQMTQTLIEKGAAYATDNGDVYFHVPAFKDYGKLSKQDLTQLNAGERVDVND 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS   LG  FDIHGGG DL FP
Sbjct: 174 IKKDPMDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAMSKKCLGDTFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA+     A +WIH G + ++  KMSKS GNF TI ++L       + + 
Sbjct: 234 HHENEIAQSECANDC-TFARVWIHTGMVQVDKEKMSKSLGNFFTIRDVL-------KQYR 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA--- 350
              +R  ++  HYR  + +T   L  A+  L +             T    GI++ A   
Sbjct: 286 PESVRYFLMSGHYRSQLSYTQANLESADASLERLYTSLRGVDFNRATDDKLGILEQAQLR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH-- 400
              A+ +D N   A+  L  LA+E  +           +       A +L +        
Sbjct: 346 FTEAMDDDFNVPEAMPVLFDLAKEVNRLKATDMATAATIAVKIKELAGVLSLLQQDPESF 405

Query: 401 ------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                  +      I+ L+Q+RL     K +  AD IR +L +    LED          
Sbjct: 406 LKSGAGDSDVSDEDIDSLIQQRLQARADKNWDLADEIRDKLHAMNIELED------AAGG 459

Query: 455 TRWKQK 460
           T W++K
Sbjct: 460 TSWRRK 465


>gi|153952840|ref|YP_001393605.1| cysteinyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219853505|ref|YP_002470627.1| hypothetical protein CKR_0162 [Clostridium kluyveri NBRC 12016]
 gi|187629803|sp|A5N4M6|SYC_CLOK5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765185|sp|B9DY88|SYC_CLOK1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146345721|gb|EDK32257.1| CysS [Clostridium kluyveri DSM 555]
 gi|219567229|dbj|BAH05213.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 465

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 177/488 (36%), Positives = 254/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NT+ R+  EF  + P  I+MYVCGPTVY+F HIGNAR  +VFD + R   Y   + 
Sbjct: 1   MRIFNTMTRRKEEFVPLIPGEIKMYVCGPTVYNFFHIGNARTFVVFDTVRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A  E      N  +  +  +   ++ +D   L     T  PR
Sbjct: 60  -VNFVQNFTDIDDKMIKKANDE------NITVQQLGDRFIDEYYRDADALNIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  IQ++I  G+AY  + ++ F+     NYG  S + I++ + G R+     
Sbjct: 113 ATLYISKIIEFIQDLIDKGYAYSVDGDVYFNAKKFNNYGKLSGQNIEQLQSGARIDIDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF +WK     EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKNPMDFAVWKSEKKGEPSWESPWGMGRPGWHIECSCMAYNILGETIDIHAGGSDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+H+ F+N+  +KMSKS  NF T  E+L+        +  
Sbjct: 233 HENEIAQSEGRTG-KVFAKYWMHSAFVNINNQKMSKSLNNFFTTREILD-------KYEP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPAV--- 351
            VIRL ML  HYR PI+F+++ L   +  L +                + GI+D  +   
Sbjct: 285 DVIRLFMLSGHYRTPINFSIELLDSTKSALDRICNSIINLEELSSKVKNDGILDSEIKYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N D           L +       
Sbjct: 345 EHLNSYKQRYIEKMDDDFNTADAISVIFDLIRDINTNIDENSSMEIIKYSLALIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++    +I   +E L+++R    K K ++ AD IR  L+ KG ILED  +    
Sbjct: 405 LGI--LQKSKRGSIETEVELLIEKRQKARKDKNWALADKIRDDLKDKGIILEDTSD---- 458

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 459 --GVRWKR 464


>gi|254724230|ref|ZP_05186015.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 465

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSIGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|254473467|ref|ZP_05086864.1| cysteinyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957583|gb|EEA92786.1| cysteinyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 483

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 227/465 (48%), Positives = 291/465 (62%), Gaps = 28/465 (6%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
              F  +D SN+RMYVCGPTVYD+AHIGNARP++VFDVL RLLR  YG+  VTYVRNITD
Sbjct: 22  KEAFVPMDASNVRMYVCGPTVYDYAHIGNARPVVVFDVLARLLRQLYGKDHVTYVRNITD 81

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
           +DDKI ERA +E        +I  +T K   Q+  D   L   AP  +PRAT HI +M  
Sbjct: 82  VDDKINERAARE------GISIRELTEKTAGQYHADMEALGAQAPDIEPRATEHIEEMKV 135

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
           +I+ ++  GHAY A+  ++F   S+P YG  S R +DE   G RV    +KK+P DF+LW
Sbjct: 136 MIETLVDKGHAYVADEHVLFHVPSMPEYGKLSNRTLDEMVAGARVEVASYKKDPTDFVLW 195

Query: 195 KRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           K S   EPGWESP G    GRPGWHIECSAMS  +LGKVFDIHGGG+DL FPHHENEIAQ
Sbjct: 196 KPSKADEPGWESPCGIETPGRPGWHIECSAMSEKHLGKVFDIHGGGVDLTFPHHENEIAQ 255

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S CA      AN+W+HNGFL +EG KMSKS GNF T+++LL+T++ GGR W    IR A+
Sbjct: 256 SRCAHDTHAMANVWLHNGFLQVEGEKMSKSLGNFFTVHQLLDTEEGGGRKWSGQAIRYAL 315

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQ-------TSTSKGIIDPAVLSALYNDLNTVSA 364
           L T YR+PIDFT + L E E  L++W         T+   G  D AVL  L +DLNT  A
Sbjct: 316 LQTQYRQPIDFTFKSLAEGEKQLTRWADLLKKHDVTAQENGTPDEAVLEGLKDDLNTPRA 375

Query: 365 IQALHKLAREST-KNHDLLPIFNASAHILGIEVC-------KEHLNKNISIA----IEKL 412
             ALHKLAR++   + D       S   LG ++        +E    ++S      +E+L
Sbjct: 376 FAALHKLARDARGGDADAAQKLANSIKFLGFDLESFSKAQSEEKAEADVSPELKAKVEEL 435

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           + +RL   K+K F+ +D IR +L + G +L+D KN + G+  T W
Sbjct: 436 IAKRLEARKVKDFAESDRIRDELAADGIVLKDMKNKETGEIETTW 480


>gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
           meningitidis 8013]
          Length = 473

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 190/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 348

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI--- 394
                         A+ +D +TV A+  L +LA E  K  N  L     A   I+G+   
Sbjct: 349 PSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQR 408

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
 gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 473

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 349 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 408

Query: 394 --IEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPIEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 473

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFD 348

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 408

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|206978367|ref|ZP_03239240.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217957665|ref|YP_002336209.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222093860|ref|YP_002527910.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
 gi|226735048|sp|B7HQS4|SYC_BACC7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765178|sp|B9IZH4|SYC_BACCQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206743428|gb|EDZ54862.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217066370|gb|ACJ80620.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221237908|gb|ACM10618.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 465

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 482

 Score =  574 bits (1479), Expect = e-161,   Method: Composition-based stats.
 Identities = 169/500 (33%), Positives = 245/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++   
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  +  E        +   I ++    + +    L        
Sbjct: 62  K--VTYVQNFTDVDDKIINTSNGE------GVSWDTIANRYIDSYFEVMDALGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +IQ +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS            W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
               +R  +L THYR P+DF+ +RL EA   L +                       +  
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRLL 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
                 +     A+ +D NT  A  ++  LA+E    +                ++  IF
Sbjct: 347 EKAKAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILG-IEVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G +E   E      +   E+L+Q     R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED        +  RWK++
Sbjct: 467 TIEDS------PQGARWKKR 480


>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 473

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 187/492 (38%), Positives = 258/492 (52%), Gaps = 58/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR      
Sbjct: 2   LTIYNTLTRKKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+
Sbjct: 60  PLTYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVEVDG 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FP
Sbjct: 174 FKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           HHENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI
Sbjct: 234 HHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTI 293

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------- 338
            E+L       + +   V+R  +L  HYR P++++   L +A+  L++            
Sbjct: 294 REVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAA 346

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI- 394
            + S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+ 
Sbjct: 347 FELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLL 406

Query: 395 -----EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                E  +     +   +  I+ L+  R      K ++ +D IR  L     ILED   
Sbjct: 407 QRDPTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN-- 464

Query: 448 PDNGQRMTRWKQ 459
                  T W++
Sbjct: 465 ----AGGTTWRR 472


>gi|328676393|gb|AEB27263.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 459

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 175/478 (36%), Positives = 249/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN ++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKKGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   +  
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKV 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K ++ AD IR QL+ +G ILED          T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458


>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 473

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGDLTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 349 LSENANDYTSRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDANLAGCLKALGGIIGLLQR 408

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|325263764|ref|ZP_08130497.1| cysteine--tRNA ligase [Clostridium sp. D5]
 gi|324030802|gb|EGB92084.1| cysteine--tRNA ligase [Clostridium sp. D5]
          Length = 468

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/491 (36%), Positives = 256/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  +F  I+   +RMYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTLSKRKEDFVPIEEGKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E            ++ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEE------GVTADEVSKRYIAECKKDMEGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVDMIGTLIEKGYAYEKNGTVYYRTRKFKEYGKLSHKNLDDLQSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
           +   V+R  ML  HYR P++F+   +  A+  L +    + +   +              
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMDAAKTGLDRIITAADNLKFLKGNAKVQEMTSAEK 344

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNAS 388
                      +   A+ +D NT  AI ++ +L +    +           DLL +    
Sbjct: 345 EAFTKTQEYIDSFERAMDDDFNTADAISSVFELVKYINTSADGESSAEYLQDLLDLLVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI V K+   + ++  IE L++ER    K K F+ AD IR +L S+G +LED +  
Sbjct: 405 TDVLGIIVEKDE--EMLAEDIEALIEERQAARKAKNFARADEIRDELLSRGIVLEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKK 467


>gi|56708635|ref|YP_170531.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110671107|ref|YP_667664.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254371268|ref|ZP_04987270.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254875501|ref|ZP_05248211.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|61216126|sp|Q5NEL1|SYC_FRATT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123063359|sp|Q14G14|SYC_FRAT1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56605127|emb|CAG46249.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110321440|emb|CAL09632.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151569508|gb|EDN35162.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254841500|gb|EET19936.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159873|gb|ADA79264.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 464

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 8   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 66  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN+++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K +  AD IR QL+ +G ILED          T WK+
Sbjct: 412 DGADASEIEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILEDSAT------GTTWKK 463


>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 482

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 169/500 (33%), Positives = 247/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++   
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  +  E        +   I ++    + +    L        
Sbjct: 62  K--VTYVQNFTDVDDKIINTSNGE------GVSWDTIANRYIDSYFEVMDALGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +IQ +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIEDIITMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
               +R  +L THYR P+DF+ +RL EA   L +                       +  
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGACDEAQRLL 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
                 +    +A+ +D NT  A  ++  LA+E    +                ++  IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILG-IEVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G +E   E      +   E+L+Q     R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED        +  RWK++
Sbjct: 467 TIEDS------PQGARWKKR 480


>gi|224457829|ref|ZP_03666302.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
          Length = 459

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            YN+L  +  +F+ I+ + I+MY CG TVYD  HIG+AR  I FDV+ R  +Y   +  V
Sbjct: 3   FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T VRNITDIDDKII+RA +        ++ + +  +N +       RL  L P+ +PRAT
Sbjct: 61  TLVRNITDIDDKIIKRANEN------GESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             IP+M+ +I+ +I  G+AY+ AN+++ +  +   +YG  S++ ++  + G+RV     K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF+LWK +   EP W+SPWG GRPGWHIECSAMS   LG  FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS   +     AN W+H+G + +   KMSKS  NF TI E+LE        +   
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
           V+R  +  T YR  I+++ + L  A+  + +                      +   + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
           + ND NT  A+  L  LA+E          K      +      +LGI         +  
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  IEKL+ ER    K K +  AD IR QL+ +G ILED          T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILEDSAT------GTTWKK 458


>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 458

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/478 (37%), Positives = 252/478 (52%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +       N     +T +      +D   L  + P  +PR
Sbjct: 61  -LNYVRNVTDVDDKIIKRAAE------TNVTCDDLTERLIGDMHQDFDALGMVRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++++I   HAY A+  +++F   S  +YG  S + +++ + G RV    
Sbjct: 114 ATQHISEIIELVESLIAQDHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVGVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG  FDIHGGG DL FP
Sbjct: 174 AKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   +   N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGGD-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
           A  +R  ++  HYR  ++++   L +A   L +         +   A         + A+
Sbjct: 286 AESVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDEQVARFVDAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIE------VCKEHL 401
            +D NT  A  AL  L RE  +           L         +LGI         K   
Sbjct: 346 DDDFNTPEAYSALFDLVREINRQKAEDMSVAAGLGARLRELGAVLGILQQDPDAFLKGDE 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  IE+L+ ER      K +++AD  R +L   G +LED          T W++
Sbjct: 406 ADEEVAEIERLIAERNQARADKNWAAADAARARLTEMGIVLEDS------AGKTSWRR 457


>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|30316184|sp|Q9JXE6|SYC_NEIMB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 473

 Score =  573 bits (1478), Expect = e-161,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 348

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                         A+ +D +TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 PSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQR 408

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
 gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
          Length = 461

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/474 (37%), Positives = 254/474 (53%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL ++ + F  I+   I+MYVCG TVYD  HIG+AR M+ FDV+ R +R      
Sbjct: 2   LQIYNTLTKEKSPFTPIEEGKIKMYVCGVTVYDLCHIGHARVMVAFDVITRFMRSQG--W 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII+RA +        +    +T +      +D  RL+ L PT +PR
Sbjct: 60  DVDYVRNITDVDDKIIKRAAEN------GEEPHELTERMIAAMHEDEARLSVLRPTQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I L++ +I  G AY A N ++ +      +YG  + + +DE K G R+  + 
Sbjct: 114 ATAHIGDIISLVETLIEKGFAYPAANGDVYYRVEKFADYGKLTNKNVDELKTGARIEVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   E  W+SPWG+GRPGWHIECSAMS   LG  FDIHGGG DL FP
Sbjct: 174 AKESPLDFVLWKSAKEGEVSWDSPWGKGRPGWHIECSAMSKCCLGNTFDIHGGGPDLPFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H G + +   KMSKS GNF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAANGC-TYVNTWMHAGPVRVNSEKMSKSLGNFFTIRDVLE-------KYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDPAVLSAL 355
           A V+R  +   HYR  ID++   L EA ++L ++ Q            +   +   ++A+
Sbjct: 286 AEVVRFFLARVHYRTYIDYSEDSLKEARVMLERFYQALRGVDAVEGPLENDFEERFIAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGI--EVCKEHLNKNI 405
            +D NT  A+  + +L  E  K           L         +LG+  +   E L    
Sbjct: 346 NDDFNTPKAVSVMFELVNELNKATREGASEAPALAAQLRKLGGMLGLLQQNADEFLQGES 405

Query: 406 S------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                    IE+L+ +R    K K F+ AD IR  L S+G IL+D +   +  R
Sbjct: 406 EEGGLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLASQGIILKDSREGTSWFR 459


>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 473

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKVGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|146310641|ref|YP_001175715.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145317517|gb|ABP59664.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 465

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 176/487 (36%), Positives = 255/487 (52%), Gaps = 49/487 (10%)

Query: 1   MKK-KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           M+   +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+
Sbjct: 1   MESLMLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRF 60

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
                 + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P
Sbjct: 61  LGY--TLKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             +PRAT+HI ++I + + +I  GHAY A N +++F   + P YG  SR+ +++ + G R
Sbjct: 113 DSEPRATHHIHEIIEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGAR 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG 
Sbjct: 173 VDVVDVKRNPMDFVLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGS 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS CA   E   N W+H+G + ++  KMSKS  NF T+ ++L      
Sbjct: 233 DLMFPHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLDNFFTVRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDP 349
            + + A  +R  ++  HYR  ++++ + L +A   L +                    + 
Sbjct: 286 -KYYDAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL 401
             +  + +D NT  A   L  +ARE  +         + L       A +LG+       
Sbjct: 345 RFIDVMNDDFNTPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPET 404

Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                   + +    IE L+  RL   + K +++AD  R +L   G +LED      G +
Sbjct: 405 FLQSGAQNDGDEVAKIEALITARLEARQAKDWAAADAARNRLTEMGIVLED------GPQ 458

Query: 454 MTRWKQK 460
            T W++K
Sbjct: 459 GTIWRRK 465


>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 460

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/481 (37%), Positives = 257/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGEMHADFDALGMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A N +++F+ S   +YG  S++ +D+ + G RV  + 
Sbjct: 114 ATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKFEDYGRLSKQDLDQLQAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
              +R  ++  HYR  ++++ + L +A   L +   +         +            A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGLDTSVEAAGGEEFVARFKEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE    K  D+             A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKADDVAAASVLGARMRELADVLGLLSQEPETFLQGG 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               +    IE L+Q+RL     K +++AD  R +L + G ILED      G + T W++
Sbjct: 406 AGEDDDVAEIEALIQQRLDARAAKDWAAADEARDKLMAMGIILED------GAQGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 483

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/489 (38%), Positives = 257/489 (52%), Gaps = 58/489 (11%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           YNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +T
Sbjct: 15  YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PLT 72

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           YVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT 
Sbjct: 73  YVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKATE 126

Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K+
Sbjct: 127 NIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKR 186

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL FPHHE
Sbjct: 187 DPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 246

Query: 247 NEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           NEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E+
Sbjct: 247 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 306

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA- 350
           L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP  
Sbjct: 307 L-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPMP 359

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI---- 394
                        A+ +D +TV A+  L +LA E  K  N  L     A   I+G+    
Sbjct: 360 SEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRD 419

Query: 395 --EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             E  +     +   +  I+ L+  R      K ++ +D IR  L     ILED      
Sbjct: 420 PTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDT----- 474

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 475 -AGGTTWRR 482


>gi|156934911|ref|YP_001438827.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
 gi|156533165|gb|ABU77991.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
          Length = 479

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  I FDV+ R LR+   + 
Sbjct: 20  LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYK- 78

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 79  -LKYVRNITDIDDKIIKRANEN------GEDFVALVDRMVTEMHKDFDALNILRPDSEPR 131

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A N +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 132 ATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVAD 191

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 192 SKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 251

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 252 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHYD 303

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +   + A
Sbjct: 304 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVEA 363

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       A +LG+   +        
Sbjct: 364 MNDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG 423

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+ +RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 424 AQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILED------GPQGTTWR 477

Query: 459 QK 460
           +K
Sbjct: 478 RK 479


>gi|118475860|ref|YP_893011.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|187629790|sp|A0R8G1|SYC_BACAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118415085|gb|ABK83504.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 465

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 173/489 (35%), Positives = 252/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  I  ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIHELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 474

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 175/493 (35%), Positives = 255/493 (51%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL ++   F   +P  +RMYVCGPT Y++ H+GNAR ++VFD + R L Y     
Sbjct: 2   IEVYNTLTKRKEPFVPREPGRVRMYVCGPTTYNYIHLGNARALVVFDTIRRYLEYRGF-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII+RA +E            +  K  + + +D  ++        PR
Sbjct: 60  RVFFVQNFTDIDDKIIKRAAEEK------MDPQELALKYIEAYFEDADQINIKRADVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++H+P+++ LI  +I  G AY A  ++ F     P YG  S R++ E + G RV    +
Sbjct: 114 VSDHLPEIVELISILIDKGFAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEPGEN 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P EP W SPWG GRPGWHIECSAM+  YLG  FDIHGGG DLIFPH
Sbjct: 174 KRDPLDFALWKKAKPGEPSWPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A      A  W+HNGF+ ++  KMSKS GN   + +++E        +P 
Sbjct: 234 HENEIAQSEAATG-RPFARYWLHNGFITVKEEKMSKSLGNVFLLRKVMEL-------YPP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTSK 344
           P +RL +L THYR P+ +T + L  A   LS+                      +     
Sbjct: 286 PAVRLFLLSTHYRSPLAYTPEYLEGAAKALSRLRSSWLFLQEAQKQAEESSGGTEQLARL 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------FNASA 389
              +    +A+ +D NT  A+     LA E     +L P+               FN   
Sbjct: 346 DKWEQDFTAAMDDDFNTARALALFFDLAHEINSWAELRPLPPAPVLRRALLLWVSFNRVL 405

Query: 390 HIL----GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            +     G+ V ++     +   ++ LV+ R    + K +++AD IR+ L++ G +LED 
Sbjct: 406 GLFPERRGLPVVEQERTMVLEELVKLLVEIRQEARQRKDWATADRIRESLKNLGIVLEDT 465

Query: 446 KNPDNGQRMTRWK 458
                    TRW+
Sbjct: 466 ------PAGTRWR 472


>gi|187631664|sp|A4W7I4|SYC_ENT38 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  573 bits (1477), Expect = e-161,   Method: Composition-based stats.
 Identities = 175/482 (36%), Positives = 253/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 60  TLKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A N +++F   + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIHEIIEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS  NF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLDNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   +  
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEARFIDV 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       A +LG+            
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPETFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+  RL   + K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQNDGDEVAKIEALITARLEARQAKDWAAADAARNRLTEMGIVLED------GPQGTIWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 473

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 186/490 (37%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFD 348

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
            S +         +A+ +D  TV A+  L +LA E  K +D  L         I+G+   
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKVLGGIIGLLQR 408

Query: 395 ---EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  I+ L+ +R      K ++ +D IR  L     ILED  +  
Sbjct: 409 DPTEFLQGGAVSDGLSNEEIDDLIAQRKQARADKNWAESDRIRNLLNEHKIILEDNAD-- 466

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 467 ----GTTWRR 472


>gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 473

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 189/490 (38%), Positives = 258/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    DP 
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPM 348

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
                         A+ +D +TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 PSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 408

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 465

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 NPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 AELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|253732537|ref|ZP_04866702.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253729466|gb|EES98195.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|329731981|gb|EGG68337.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 466

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+ ++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKELVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|218703810|ref|YP_002411329.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403647|ref|ZP_06647738.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298379257|ref|ZP_06989138.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300897246|ref|ZP_07115688.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
 gi|226735058|sp|B7N980|SYC_ECOLU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218430907|emb|CAR11781.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
 gi|291429500|gb|EFF02520.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298280370|gb|EFI21874.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300358974|gb|EFJ74844.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
          Length = 461

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGPGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSSVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 473

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFD 348

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 408

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|225568316|ref|ZP_03777341.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
           15053]
 gi|225162845|gb|EEG75464.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
           15053]
          Length = 468

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 183/491 (37%), Positives = 252/491 (51%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLFNTLTRKKEEFVPVEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        +   I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVSADEISKRYIKECKKDMEGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I ++I  G+AYE N  + F T S  +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVEMIGSLIEKGYAYEKNGTVYFRTRSFKDYGKLSHKNLDDLRTGERSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWDSPWSDGRPGWHIECSVMSRKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++  KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNHKMSKSLGNFRTVREISE-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
           +   V+R  ML  HYR P++F+   +  +   L +                         
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMEASRNGLERIVNAAGNLKFLMGSAKSEEMTAQER 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
           +             +A+ +D NT  A+ A+ +L +      D          LL      
Sbjct: 345 EAFAGSEEFVKGFEAAMDDDFNTADAVAAVFELVKYINTTADAHSSRAYLQALLSRLVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+ V K+     +   IEKL+ ER    K K F+ AD IR  L  KG ILED +  
Sbjct: 405 TDVLGLIVDKKE--DMLEEEIEKLIAERQAARKEKNFARADEIRGTLLEKGIILEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKK 467


>gi|160893352|ref|ZP_02074139.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
 gi|156865044|gb|EDO58475.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
          Length = 468

 Score =  572 bits (1476), Expect = e-161,   Method: Composition-based stats.
 Identities = 192/491 (39%), Positives = 254/491 (51%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R   EF  I+   + +YVCGPTVYD+ HIGNARPMIVFD L R L Y   + 
Sbjct: 1   MKIFNTLTRTKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLTYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E           +I+ +   +  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANEE------GVDSKVISERFIAETKKDMAAMNVQEATTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
           AT  IP MI +I+ +I  GHAYE N  + F T S  +YG  S + ID+ + G R      
Sbjct: 113 ATEEIPDMIEMIKTLIEKGHAYEVNGTVYFRTRSFADYGKLSHKNIDDLESGHRAENHQL 172

Query: 182 ----KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               +  K++P DF+LWK     EP WESPWG GRPGWH+ECS MS  Y+G + DIH GG
Sbjct: 173 KVSGQDEKEDPLDFVLWKPKKEGEPFWESPWGEGRPGWHLECSVMSKKYIGDIIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENEIAQS  A+  E  A  W+HNGFL +   KMSKS GNF T+ E+ +    
Sbjct: 233 EDLIFPHHENEIAQSEAANDKE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAD---- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------- 350
               +P  VIR  ML  HYR P++F+   +  ++  L +          + PA       
Sbjct: 288 ---KYPLQVIRFFMLSAHYRSPLNFSADLVEASKNGLERILTAVDKLKSLAPADVEGSDV 344

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                         +A+ +DLNT  AI  + +L + +  N             +      
Sbjct: 345 SVEAELDGYTKRFETAMDDDLNTADAISVIFELVKYTNINISNDTPKKTVDLAIRTIEKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             ILGI   +E   + +   IE L+ ER    K K F+ AD IR  L  KG ILED +  
Sbjct: 405 CDILGIITEREE--ELLDSDIEALINERQEARKAKNFARADEIRNMLSDKGIILEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKR 467


>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 474

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 189/494 (38%), Positives = 262/494 (53%), Gaps = 60/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +++ EF+ I    + MYVCG TVYD  HIG+AR  + FDV+YR L++   + 
Sbjct: 2   LKIYNTLGKRLEEFKPIKNGKVGMYVCGVTVYDNCHIGHARSAVAFDVMYRYLKFKGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII RA +E        + + I  +   ++ KD  RL    P  +P+
Sbjct: 61  -VTFVKNFTDVDDKIINRANEE------GVSCNEIAQRYIGEYYKDMYRLNIAKPEVEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I L++ +   G+AYE N ++ +      +YG  S + IDE K G RV     
Sbjct: 114 ATEHINEIIELVRKLQDMGYAYEVNGDVYYRVEKFKDYGKLSGKNIDELKSGARVEINDK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWKRS   EP W+SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLIFPH
Sbjct: 174 KENPLDFALWKRSKENEPKWKSPWGEGRPGWHIECSAMSMKYLGESFDIHGGGEDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  WIHNGF+ +   KMSKS GNF TI ++L       + +  
Sbjct: 234 HENEIAQSEAATG-KPFARYWIHNGFVRINKEKMSKSLGNFFTIKDIL-------KKYDG 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
             +R  +L+THYR PIDF+ + L  A+  L+++          +                
Sbjct: 286 QTLRYFLLLTHYRSPIDFSFEGLDAAKEALNRYYNFIQRLEDTEFEKNGKVDELLEKRLK 345

Query: 349 ---PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------------LLPIFNASAH 390
                   A+  D N   AI  +  + +   +  D                L   N    
Sbjct: 346 DLLARFEEAMDEDFNAPKAIGEVFSVIKTFNQYLDSITEGDKPKKAYKETFLESMNKIKS 405

Query: 391 ILGIEV---CKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +LG+         + + I +  +E+ +++R +  K K + +AD IR +L  KG ILED K
Sbjct: 406 VLGVFDTSSASWFIPEGIDVDWVEERIKQRALARKNKDYETADKIRDELNGKGIILEDAK 465

Query: 447 NPDNGQRMTRWKQK 460
                   TRWK K
Sbjct: 466 ------EYTRWKVK 473


>gi|170767865|ref|ZP_02902318.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
 gi|170123353|gb|EDS92284.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
          Length = 461

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L    P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVERMIAEMHKDFDALNIQRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLASVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|283834167|ref|ZP_06353908.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291070317|gb|EFE08426.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 461

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHSDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGMASHLRKLSSVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|89100736|ref|ZP_01173591.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89084553|gb|EAR63699.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 465

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 166/487 (34%), Positives = 249/487 (51%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNT+ R+  EF  ++   ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IAIYNTMSRQKEEFIPLEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I  A++      + + +  I  +    + +D + L C      PR
Sbjct: 62  -VQYISNFTDVDDKLIRAAKE------LGEDVPSIAERFIDAYFEDVSALGCKRADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ +I  G AYE+N ++ F T     YG  S++ IDE ++G R+     
Sbjct: 115 VTESMDLIIQFIEALIEKGFAYESNGDVYFHTRRFDEYGKLSQQSIDELRVGARIAVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KQDALDFALWKTAKEGEISWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N+   KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFVLVHDII-------KKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            V+R  ML  HYR PI+++ + L      L +   +  +                     
Sbjct: 287 QVLRFFMLSVHYRHPINYSDELLENTRSGLERITTSYQNLAHRKEASAELTDNNSEWLKK 346

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
              +    +  + +D NT + I  L +L+R++                 +  F     +L
Sbjct: 347 IEDLHGEFIKEMDDDFNTANGISVLFELSRQANYYLLEKNTSVEVIEAFMKEFEILFDVL 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ +  E L   +   I+ L+++R    K + F  +D IR QL+    ILED        
Sbjct: 407 GLSLGGEEL---LDDEIDALIEKRNQARKERNFQLSDQIRDQLKEMNIILEDT------A 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|144897394|emb|CAM74258.1| Cysteinyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 459

 Score =  572 bits (1475), Expect = e-161,   Method: Composition-based stats.
 Identities = 225/478 (47%), Positives = 280/478 (58%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   FQ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL   Y   
Sbjct: 3   LVLYNTLTRRKEAFQPLSPDHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLSRLY--P 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI +R++         + I++IT++ TQ F  D   L  L PT +PR
Sbjct: 61  SVTYVRNITDVDDKINQRSKDS------GEPIAVITARTTQMFHDDIAELNALPPTIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI +IQ +I  GHAY A   ++F+  S+ +YG  SRR +DE   G RV    +
Sbjct: 115 ATAHIQQMIDMIQVLIAKGHAYAAEGHVLFEVGSMADYGQLSRRSMDEMIAGARVEVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN  DF+LWK STP  PGW+SPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 175 KKNAGDFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMSGQYLGQTFDIHGGGQDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA+     A  W+HNG+L +EG KMSKS GNF T+ ELLE         P 
Sbjct: 235 HENEIAQSQCANGA-PFARYWLHNGYLMVEGEKMSKSLGNFFTVRELLEAA-------PG 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPAVLSALYN 357
             IRL ML THY +P D+T + L +A   L +                 +  AV +AL +
Sbjct: 287 EAIRLCMLSTHYHQPFDWTAEGLKQARATLDRLYNALRGTADAGTEAVDLPLAVQAALED 346

Query: 358 DLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGIEVCKEHL---------- 401
           DLNT  AI  LH+LA    K               A+   LG+ +    +          
Sbjct: 347 DLNTPLAISHLHELAGALNKAESAADKARARGALLAAGQALGVLLQDPEVWFRWQSAGAD 406

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +      IE L+Q RL   K K F+ AD IRK+L   G +LED      G + T WK+
Sbjct: 407 SGPDEAGIESLIQARLEARKAKNFAEADRIRKELADSGVVLED------GPQGTTWKR 458


>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 461

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 184/482 (38%), Positives = 257/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  +  EF+ I    I MYVCG TVYDF HIG+AR MI FDV+ R+LR+   + 
Sbjct: 2   LRIYNTLTGQKEEFKPIVEGKIGMYVCGNTVYDFCHIGHARAMISFDVISRILRHL--DY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +  S +T +  +   +D   L  L P  +P+
Sbjct: 60  DLTYVRNITDVDDKIIKRAAEN------GELPSDLTERMIEAQQEDEKALGNLPPDREPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I +I+ ++  G AY+++  ++ +  S   +YG  + RK++E   G RV    
Sbjct: 114 ATEFMQEIINMIKTLVDKGFAYQSDSGDVFYRASRFTDYGKLNNRKLEEMLAGARVEVTE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF+LWK     E  W+SPWG+GRPGWHIECSAMS++ LG  FDIHGGG DL FP
Sbjct: 174 SKEHPADFVLWKPVKEGEVHWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+H G + +   KMSKS GNF TI E+L       + + 
Sbjct: 234 HHENEIAQSEAATG-KDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVL-------KLYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSAL 355
             V+R  M+ +HYR PID++ Q L +A++ L +       +                +AL
Sbjct: 286 PEVLRYLMVSSHYRSPIDYSDQSLNDAKVALERLYNALRDQSCSEIPESSDYRTRFTAAL 345

Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE-------- 399
            +D NT  A+  L  L R+  K           L       A +LG+             
Sbjct: 346 NDDFNTPVALSVLFDLVRDLNKAKTESAELAETLAAELTNLASVLGLLYQDADYFLKNGT 405

Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                  +  IEKL++ER    K K FS +D IR  L  KG  L D +        T W 
Sbjct: 406 FDAEGISADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIELLDSR------EGTSWT 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|288959132|ref|YP_003449473.1| cysteinyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288911440|dbj|BAI72929.1| cysteinyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 458

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 213/478 (44%), Positives = 285/478 (59%), Gaps = 42/478 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F+ + P ++ MYVCGPTVYD AHIGNARP++VFD+L+RLL   Y 
Sbjct: 1   MPLDLYNTLTRRKERFEPLRPDHVGMYVCGPTVYDTAHIGNARPVVVFDLLFRLLSRLY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKII+RAR         + I  +T++ T  F  D   L  L PT +
Sbjct: 60  -PAVTYVRNITDVDDKIIDRARDS------GEPIDALTARTTDLFHADMDALNALRPTIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QMI LI  +I  G+AY A   ++F   S+P+YG  SRR +++   G RV   
Sbjct: 113 PRATQHIGQMIALIATLIERGNAYAAEGHVLFSVPSMPSYGQLSRRSLEDMIAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++ +DF+LWK S+P +PGW+SPWGRGRPGWHIECSAM+  +LG  FDIHGGGLDLIF
Sbjct: 173 PYKRDASDFVLWKPSSPDQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA+  ++ A  W+HNGF+ +EG KMSKS GNF T+++LL+        +
Sbjct: 233 PHHENEIAQSCCANGTDRLARTWVHNGFVTVEGEKMSKSLGNFFTVHDLLD-------EF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAVLSALYN 357
           P   IRL +L  HYR+P+DFT + + +A+  L +W Q            +   VL+AL +
Sbjct: 286 PGEAIRLTLLSAHYRQPLDFTREGIRQAKGALDRWYQALRGDPAPAAAAVPFDVLAALED 345

Query: 358 DLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGIEVCKEHL---------- 401
           DLN+  AI  LH+LA    K               A+   LG+                 
Sbjct: 346 DLNSPLAIAHLHELATAVNKARSDAEKAAAKGALLAAGQQLGLLRQDPEAWFRWAPTGGV 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  +E+L+ +R      K F+ AD IRK+L  KG +LED      G + T WK+
Sbjct: 406 EGLSDAEVERLIIDRKTARAAKNFAEADRIRKELADKGIVLED------GPQGTSWKR 457


>gi|57651406|ref|YP_185462.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160084|ref|YP_493218.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194292|ref|YP_499084.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220704|ref|YP_001331526.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|262049572|ref|ZP_06022441.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|262052418|ref|ZP_06024618.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|284023539|ref|ZP_06377937.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294850305|ref|ZP_06791039.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|61216110|sp|Q5HIE5|SYC_STAAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894946|sp|Q2FJB0|SYC_STAA3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123291881|sp|Q2G2M6|SYC_STAA8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|172048774|sp|A6QEI2|SYC_STAAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631648|sp|A8YZM7|SYC_STAAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57285592|gb|AAW37686.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126058|gb|ABD20572.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201850|gb|ABD29660.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150373504|dbj|BAF66764.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|259159664|gb|EEW44708.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259162312|gb|EEW46885.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|294822817|gb|EFG39252.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|302332243|gb|ADL22436.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
 gi|315196659|gb|EFU27006.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320141606|gb|EFW33445.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320141766|gb|EFW33594.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329731047|gb|EGG67420.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 466

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
 gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|259511826|sp|C3KVS3|SYC_CLOB6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
 gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 465

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 173/488 (35%), Positives = 255/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFLPLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKKANEE------GTTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMKEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPEEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEGLRDEELKYR 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N             L +       
Sbjct: 345 DELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNITIESSKELVKYALDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++    ++   IE+L+QER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQKSTKASLEEEIERLIQERQKARKEKDWALADKIRDDLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGVRWKQ 464


>gi|221141034|ref|ZP_03565527.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|302750421|gb|ADL64598.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 466

 Score =  572 bits (1474), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
 gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
          Length = 472

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 165/489 (33%), Positives = 260/489 (53%), Gaps = 53/489 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y   
Sbjct: 5   NKMKLFNTMTRQKEEFKPIKDGEVNMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +++N TDIDDK+I++A +E      N  +  +  +  +++ KD+  L     T  
Sbjct: 65  K--VNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIEEYYKDSDGLNIKRATVN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  + +++  ++++I  G+AY+ + ++ F T     YG  S + +++ + G R+   
Sbjct: 117 PRATEFMDEIVAFVKDLIDKGYAYKVDGDVYFSTKKFTEYGKLSGQNLEDLQAGARITVD 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK   P EP WESPWG+GRPGWHIECS M+   LG   DIH GG DL+F
Sbjct: 177 ERKQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +  +  AN W+H+ +LN+  +KMSKS  NF T  E+LE        +
Sbjct: 237 PHHENEIAQSEARNG-KAFANYWMHSAYLNINNKKMSKSLNNFFTTREILER-------Y 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV----------- 351
            A VIRL ML  HYR P++F+ + L  A+    +   +  +   +   V           
Sbjct: 289 DAEVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEKMTEDEKE 348

Query: 352 ------------LSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHI---LG 393
                       +  + +D NT  AI  +  L +E            + N S  I   LG
Sbjct: 349 YTKVLNSYKEKYIEKMDDDFNTADAIAVIFDLIKEINTHVNADSSKELVNYSLEIIRELG 408

Query: 394 --IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             + + ++    +++  IE L+++R    K + ++ AD IR  L+++G +LED       
Sbjct: 409 MPLGILQKSTMLDLNAEIEGLIEQRQQARKDRNWALADKIRDDLKARGIVLEDT------ 462

Query: 452 QRMTRWKQK 460
            +  RWK++
Sbjct: 463 PQGVRWKKE 471


>gi|187608842|sp|A7MK00|SYC_ENTS8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  I FDV+ R LR+   + 
Sbjct: 2   LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        +    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GEDFVALVDRMVTEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A N +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 SKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +            T       +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       A +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+ +RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQANDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|170683319|ref|YP_001742670.1| cysteinyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|331645713|ref|ZP_08346816.1| cysteine--tRNA ligase [Escherichia coli M605]
 gi|226735059|sp|B1LKE5|SYC_ECOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|170521037|gb|ACB19215.1| cysteinyl tRNA synthetase [Escherichia coli SMS-3-5]
 gi|222032317|emb|CAP75056.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
 gi|281177699|dbj|BAI54029.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
 gi|312945102|gb|ADR25929.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|330910316|gb|EGH38826.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
 gi|331044465|gb|EGI16592.1| cysteine--tRNA ligase [Escherichia coli M605]
          Length = 461

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|21282214|ref|NP_645302.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485394|ref|YP_042615.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297208757|ref|ZP_06925185.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912847|ref|ZP_07130289.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|24418688|sp|Q8NXY7|SYC_STAAW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56749395|sp|Q6GBV8|SYC_STAAS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21203650|dbj|BAB94350.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243837|emb|CAG42262.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|296886702|gb|EFH25607.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300885951|gb|EFK81154.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 466

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDRGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|258452738|ref|ZP_05700736.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282924443|ref|ZP_06332115.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|257859611|gb|EEV82461.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282592854|gb|EFB97858.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
          Length = 471

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 262/483 (54%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  
Sbjct: 65  N--VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------T 342
              V+R  M+  HYR PI++ ++ +  A   L +   +                      
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
               I     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468

Query: 452 QRM 454
           +R 
Sbjct: 469 KRG 471


>gi|218547963|ref|YP_002381754.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|226735060|sp|B7LJI4|SYC_ESCF3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218355504|emb|CAQ88115.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|324113037|gb|EGC07013.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 461

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMVAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|161508769|ref|YP_001574428.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|160367578|gb|ABX28549.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
          Length = 476

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 262/483 (54%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 10  KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 69

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  
Sbjct: 70  N--VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 122 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 181

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 182 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 241

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 242 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 293

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------T 342
              V+R  M+  HYR PI++ ++ +  A   L +   +                      
Sbjct: 294 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 353

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
               I     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 354 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 413

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 414 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 473

Query: 452 QRM 454
           +R 
Sbjct: 474 KRG 476


>gi|15800263|ref|NP_286275.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829842|ref|NP_308615.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168747790|ref|ZP_02772812.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168754640|ref|ZP_02779647.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168768489|ref|ZP_02793496.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168774602|ref|ZP_02799609.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168779029|ref|ZP_02804036.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168786387|ref|ZP_02811394.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|195936093|ref|ZP_03081475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208808572|ref|ZP_03250909.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208815777|ref|ZP_03256956.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208822926|ref|ZP_03263244.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209397071|ref|YP_002269179.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217324178|ref|ZP_03440262.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791714|ref|YP_003076551.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261224014|ref|ZP_05938295.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261257708|ref|ZP_05950241.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|291281437|ref|YP_003498255.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|21264001|sp|Q8XCT9|SYC_ECO57 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710840|sp|B5YPP1|SYC_ECO5E RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|12513423|gb|AAG54883.1|AE005233_9 cysteine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13360046|dbj|BAB34011.1| cysteine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187769725|gb|EDU33569.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188017727|gb|EDU55849.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189003129|gb|EDU72115.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189357976|gb|EDU76395.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189362536|gb|EDU80955.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189373672|gb|EDU92088.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|208728373|gb|EDZ77974.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208732425|gb|EDZ81113.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208737119|gb|EDZ84803.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209158471|gb|ACI35904.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209777878|gb|ACI87251.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777880|gb|ACI87252.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777882|gb|ACI87253.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777884|gb|ACI87254.1| cysteine tRNA synthetase [Escherichia coli]
 gi|209777886|gb|ACI87255.1| cysteine tRNA synthetase [Escherichia coli]
 gi|217320399|gb|EEC28823.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254591114|gb|ACT70475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|290761310|gb|ADD55271.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320192951|gb|EFW67591.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320638305|gb|EFX08030.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320643709|gb|EFX12839.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320649025|gb|EFX17612.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320654603|gb|EFX22608.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320660389|gb|EFX27860.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
 gi|320665083|gb|EFX32180.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326341299|gb|EGD65091.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
 gi|326345924|gb|EGD69663.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
          Length = 461

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|194432744|ref|ZP_03065029.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
 gi|194419006|gb|EDX35090.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
          Length = 461

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHITEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|18311409|ref|NP_563343.1| cysteinyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|168214716|ref|ZP_02640341.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|168217920|ref|ZP_02643545.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182626995|ref|ZP_02954725.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|21264002|sp|Q8XHQ5|SYC_CLOPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|18146093|dbj|BAB82133.1| cysteine-tRNA ligase [Clostridium perfringens str. 13]
 gi|170713805|gb|EDT25987.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|177907665|gb|EDT70289.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|182380037|gb|EDT77516.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 466

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 171/488 (35%), Positives = 245/488 (50%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y   + 
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +  I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEE------GTTVKKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIR  ML  HYR+ ++F+   L  A+  + +      +   +   V             
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     +  + +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++    N+   IE L+ +R    K + F+ AD IR +L+ +G +LED       
Sbjct: 406 LG--MFQKSTKGNLEEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDT------ 457

Query: 452 QRMTRWKQ 459
            +  RWK 
Sbjct: 458 PQGVRWKM 465


>gi|256023857|ref|ZP_05437722.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|301648555|ref|ZP_07248272.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|307137169|ref|ZP_07496525.1| cysteinyl-tRNA synthetase [Escherichia coli H736]
 gi|331641048|ref|ZP_08342183.1| cysteine--tRNA ligase [Escherichia coli H736]
 gi|301073390|gb|EFK88196.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
 gi|315616534|gb|EFU97151.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
 gi|323972179|gb|EGB67391.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
 gi|331037846|gb|EGI10066.1| cysteine--tRNA ligase [Escherichia coli H736]
          Length = 461

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADGSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|237730496|ref|ZP_04560977.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226906035|gb|EEH91953.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 461

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHSDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGMAAHLRKLSSVLGLLEQDPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
 gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
          Length = 497

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 168/500 (33%), Positives = 243/500 (48%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++   
Sbjct: 17  REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY 76

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  +  E        +   I ++    + +    L        
Sbjct: 77  K--VTYVQNFTDVDDKIINTSNGE------GVSWDTIANRYIDSYFEVMDALGVQRADIY 128

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +I  +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 129 PRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVD 188

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 189 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 248

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 249 PHHENEIAQSEGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 301

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
               +R  +L THYR P+DF+ +RL EA   L +                          
Sbjct: 302 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQHLL 361

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
                 +    +A+ +D NT  A  ++  LA+E    +                ++  IF
Sbjct: 362 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQTVTGREGVVCQEAIAEVKRIF 421

Query: 386 NASAHILGIEVCKEHLNKNI-SIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++GI       N    +   E+L+Q     R      K+++ AD IR +L   G 
Sbjct: 422 KFMTEVIGILEKAWEGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIRDRLAEIGI 481

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED        +  RWK++
Sbjct: 482 TIEDS------PQGARWKKR 495


>gi|253731134|ref|ZP_04865299.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725099|gb|EES93828.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 466

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKIANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|229825688|ref|ZP_04451757.1| hypothetical protein GCWU000182_01051 [Abiotrophia defectiva ATCC
           49176]
 gi|229790251|gb|EEP26365.1| hypothetical protein GCWU000182_01051 [Abiotrophia defectiva ATCC
           49176]
          Length = 465

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/488 (38%), Positives = 261/488 (53%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF  ++P  ++MYVCGPTVY+F HIGNARP+I+FD + R   Y   + 
Sbjct: 1   MKIHNTLTNKEEEFIPLEPGKVKMYVCGPTVYNFMHIGNARPIIIFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E        + + I+ +   +   D   L  L  T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIKRANEE------GVSSTEISERYIIEAKTDMEGLNVLPATKNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  MI +I+ +I  GHAY  N  + F T S   YG  S + ID+ + G R+     
Sbjct: 113 ATEEIDGMIEMIEELIKKGHAYAKNGSVYFRTRSFEEYGKLSNKNIDDLEAGARIAVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK     EP W SPWG GRPGWHIECS MS  YLG+  DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKPKKEGEPFWVSPWGEGRPGWHIECSVMSKKYLGEQIDIHAGGEDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  W+HNG+L +   KMSKS GNFITI ++        + +  
Sbjct: 233 HENEIAQSEAAN-DKDFAKYWMHNGYLRINNEKMSKSLGNFITIRDV-------SKEYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------TSTSKGII 347
            V+R  ML  HYR PI+F+ + +  A+  L +                    T   K ++
Sbjct: 285 GVLRFFMLGAHYRGPINFSHELMEAAKTGLERITNAVANLDFLLESANDRSLTEAEKEVL 344

Query: 348 DPA------VLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
           D A        +A+  D NT  A+ A+  L + +              ++  +    + +
Sbjct: 345 DKALAYKADFEAAMDADFNTADAVTAVFNLVKLANSEINTESSSELIKEVRGLIVILSDV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG++V KE   + +   IE L++ER    K K F+ AD IR+ L SKG +LED +     
Sbjct: 405 LGVKVVKEK--EILDEEIEALIKERTEARKSKNFARADEIREILTSKGIVLEDTR----- 457

Query: 452 QRMTRWKQ 459
               +WK+
Sbjct: 458 -EGVKWKR 464


>gi|169344133|ref|ZP_02865116.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297744|gb|EDS79843.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 466

 Score =  571 bits (1473), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/488 (35%), Positives = 246/488 (50%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y   + 
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +  I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEE------GTTVKKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIR  ML  HYR+ ++F+   L  A+  + +      +   +   V             
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     +  + +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNQYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++    N++  IE L+ +R    K + F+ AD IR +L+ +G ILED       
Sbjct: 406 LG--MFQKSTKGNLAEEIEALIAKRQQARKDRDFALADKIRDELKDRGIILEDT------ 457

Query: 452 QRMTRWKQ 459
            +  RWK 
Sbjct: 458 PQGVRWKM 465


>gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 473

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFD 348

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 408

Query: 395 ---EVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 460

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 184/480 (38%), Positives = 254/480 (52%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ + P  I MYVCG TVYDF H+G+AR M+ FDV+ R LR+   + 
Sbjct: 3   LQIYNTLSRQKEEFKPLQPGKIGMYVCGMTVYDFCHMGHARVMVSFDVIVRYLRHKGFD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII+RA +        +    +  +      +D  +L  L P  +PR
Sbjct: 62  -VNYIRNITDIDDKIIQRAAEN------GEPFEQLVDRMVDAMNEDFAKLNILTPNSEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  +I +++ +I  G AY A N ++ +       YG  S + ++E + G R+  + 
Sbjct: 115 ATQHIDGIIKMVETLIEKGFAYAAKNGDVYYRVRKFDGYGKLSGKILEELESGARIAVEE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 175 EKEDPLDFVLWKSAKPEEPSWDSPWGQGRPGWHIECSVMSTCCLGNNFDIHGGGPDLKFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A      AN W+H G L ++G KMSKS GNF TI ++LE        + 
Sbjct: 235 HHENEIAQSEAATGEH-YANTWMHAGALRIDGEKMSKSLGNFFTIRDILE-------KYD 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPA---------- 350
           A VIR  +    YR  I+++   L +AE  L +            +ID            
Sbjct: 287 AEVIRFFLSSVQYRSAINYSEDGLKDAEAKLDRLYNAIHGCDLSAVIDEQDAVVQDTRER 346

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCK-----EH 400
             +A+ +D NT  AI  L  L  E  K        L  +    + ILG          + 
Sbjct: 347 FEAAMDDDFNTPKAIAVLFDLVNEINKKEGAEKNPLAALLVELSSILGCLQSDPDNYLQR 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                   I+  +QER    K K F+ AD IR+ L+++G IL+D +        T W +K
Sbjct: 407 GVTLDDAYIQGKIQERAQAKKDKDFALADKIREDLDAQGIILQDSR------EGTTWVKK 460


>gi|16759512|ref|NP_455129.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142716|ref|NP_806058.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56414312|ref|YP_151387.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161615258|ref|YP_001589223.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|168239036|ref|ZP_02664094.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|168240371|ref|ZP_02665303.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|168465640|ref|ZP_02699522.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|194442819|ref|YP_002039781.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194451708|ref|YP_002044570.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194734068|ref|YP_002113550.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197363232|ref|YP_002142869.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|198241911|ref|YP_002214492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200389934|ref|ZP_03216545.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|213162267|ref|ZP_03347977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
 gi|213423442|ref|ZP_03356426.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E01-6750]
 gi|213427916|ref|ZP_03360666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
 gi|213586100|ref|ZP_03367926.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
 gi|213617481|ref|ZP_03372307.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
 gi|213647061|ref|ZP_03377114.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|289823986|ref|ZP_06543585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
 gi|21264006|sp|Q8Z8P6|SYC_SALTI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216133|sp|Q5PCE2|SYC_SALPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631630|sp|A9MW31|SYC_SALPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710850|sp|B5FLP7|SYC_SALDC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558785|sp|B4TA89|SYC_SALHS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558786|sp|B4SXP2|SYC_SALNS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558787|sp|B5BCZ8|SYC_SALPK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558788|sp|B4TN59|SYC_SALSV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|25293235|pir||AC0569 cysteinyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501804|emb|CAD05021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29138347|gb|AAO69918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|56128569|gb|AAV78075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161364622|gb|ABX68390.1| hypothetical protein SPAB_03027 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194401482|gb|ACF61704.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194410012|gb|ACF70231.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|194709570|gb|ACF88791.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|195631983|gb|EDX50503.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|197094709|emb|CAR60239.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197288172|gb|EDY27557.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|197936427|gb|ACH73760.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199602379|gb|EDZ00925.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205339820|gb|EDZ26584.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|322614796|gb|EFY11725.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322618903|gb|EFY15791.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322623610|gb|EFY20449.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322629091|gb|EFY25870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322631812|gb|EFY28566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322637451|gb|EFY34153.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322642135|gb|EFY38745.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322645840|gb|EFY42361.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322649781|gb|EFY46206.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322653205|gb|EFY49538.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
 gi|322660646|gb|EFY56882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322664798|gb|EFY60991.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322669149|gb|EFY65299.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322670695|gb|EFY66828.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322679067|gb|EFY75122.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322682094|gb|EFY78119.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322685076|gb|EFY81073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323193031|gb|EFZ78254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323196887|gb|EFZ82029.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323203872|gb|EFZ88889.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323207042|gb|EFZ91995.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323214431|gb|EFZ99182.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323220129|gb|EGA04593.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323226317|gb|EGA10529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
 gi|323230246|gb|EGA14366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323233984|gb|EGA18073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323238322|gb|EGA22380.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323244009|gb|EGA28018.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323246597|gb|EGA30571.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323252160|gb|EGA36017.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323257792|gb|EGA41471.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323261192|gb|EGA44784.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323264876|gb|EGA48375.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323272440|gb|EGA55847.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
 gi|326622240|gb|EGE28585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
          Length = 461

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 473

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 176/464 (37%), Positives = 251/464 (54%), Gaps = 32/464 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YN+L R+   F   +P  I MYVCG TVYD+ HIG+AR M+VFD + R LR      
Sbjct: 24  LQFYNSLTRQKEAFIPREPGKIGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRASGY-- 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII RA +        + I  +T++      +D   L C  P  +PR
Sbjct: 82  ALKYVRNITDIDDKIIARAHEN------GEPIDALTARFITAMHEDEAALGCQRPDVEPR 135

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  MI L+Q +I  GHAY A+  ++ +   S P YG  + R +D+ + G R+    
Sbjct: 136 ATAAVSGMIELVQTLIAKGHAYAADNGDVYYAVRSFPAYGKLANRSLDDLRAGERIAVNE 195

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP W+SPWG+GRPGWHIECS M +  LG+ FDIHGGG+DL FP
Sbjct: 196 AKKDPLDFVLWKAAKPGEPAWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMDLKFP 255

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EIAQS  A       N WIHNGF+ ++  KMSKS GNF T+ ++L       + + 
Sbjct: 256 HHECEIAQSEGACG-HPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDVL-------KKYD 307

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIID----PAVLSALY 356
              +R  +L +HYR P++++   L EA+  L++       + + G +D     A   A+ 
Sbjct: 308 GETLRAFILSSHYRGPLNYSDAALDEAKKALTRLYSALDKAPADGAMDADAVAAFDEAMN 367

Query: 357 NDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGI------EVCKEHLNKNISIA- 408
           +D NT  A   L  LAR        L       +  LG+      +  K   + ++S A 
Sbjct: 368 DDFNTPKAFAVLFDLARRLNSGETALAATLKTLSGRLGLLQQNPADWLKGENSGSLSEAD 427

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           I   +  R      K ++ AD IR +L ++G I++D       +
Sbjct: 428 ILARIHARAEAKAAKDYARADAIRAELAAQGIIIKDTAGGVEWR 471


>gi|304381872|ref|ZP_07364519.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|304339658|gb|EFM05605.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
          Length = 466

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +D++ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDIVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 486

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 179/500 (35%), Positives = 262/500 (52%), Gaps = 60/500 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL      F+ + P  +RMYVCG TVYD+ HIG+AR  +VFDVL R L Y     
Sbjct: 2   LRLYNTLSGSKEPFEPLVPGKVRMYVCGVTVYDYCHIGHARSALVFDVLRRYLEYSGF-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TD+DDKII+RA+++        +   +T+     + +D  +L     T +PR
Sbjct: 60  VVEFAKNFTDVDDKIIKRAKEQ------GVSCEHVTTTYINAYYEDMEKLGVRRATLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +++ L+  ++  G AY  + ++ F       YG  S+R +D+ + G RV     
Sbjct: 114 ATEHIAEIVRLVDTLLAKGMAYRVDGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG+GRPGWHIECSAM+  +LG+ FDIHGGG+DLIFPH
Sbjct: 174 KRHPMDFALWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMRHLGETFDIHGGGMDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSC A   E  A  W+HNGF+ +   KMSKS GNF TI E+ +  ++   +   
Sbjct: 234 HENEIAQSCGATGKE-FARYWVHNGFVQINQEKMSKSLGNFFTIREIFQKSEW-PDTVTG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            ++R  +L THYR P+DF+ Q L EA+  L+ +           P               
Sbjct: 292 EMLRYFLLTTHYRSPLDFSDQSLKEAKNALNGFYDLFERLNESAPVHSPGDQSMQEAMVR 351

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGIEV 396
              A ++A+ +DLNT +A+ AL  L  ++ K  +          +   F A   +LG+  
Sbjct: 352 TREAFVAAMDDDLNTPNALAALQMLRGDTNKALEAGLSGEMRQMVRQEFRALGIVLGLLQ 411

Query: 397 -----------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                             +          I   +  RL   + K +  AD +R +L S G
Sbjct: 412 TDTWRFKIQQQQPSSGGAEASTGTLSDEDIADKLAARLAAKRSKNYQLADQLRAELASHG 471

Query: 440 FILEDYKNPDNGQRMTRWKQ 459
             +ED ++  +     RWK+
Sbjct: 472 ITIEDRQDGTS-----RWKR 486


>gi|26246536|ref|NP_752575.1| cysteinyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91209601|ref|YP_539587.1| cysteinyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117622783|ref|YP_851696.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157155754|ref|YP_001461714.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
 gi|157160050|ref|YP_001457368.1| cysteinyl-tRNA synthetase [Escherichia coli HS]
 gi|162139357|ref|YP_688055.2| cysteinyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|170021093|ref|YP_001726047.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|191172271|ref|ZP_03033813.1| cysteinyl tRNA synthetase [Escherichia coli F11]
 gi|193064170|ref|ZP_03045254.1| cysteinyl tRNA synthetase [Escherichia coli E22]
 gi|193067585|ref|ZP_03048552.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
 gi|194429574|ref|ZP_03062094.1| cysteinyl tRNA synthetase [Escherichia coli B171]
 gi|194437452|ref|ZP_03069549.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
 gi|209917742|ref|YP_002291826.1| cysteinyl-tRNA synthetase [Escherichia coli SE11]
 gi|218553090|ref|YP_002386003.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218557437|ref|YP_002390350.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
 gi|218688385|ref|YP_002396597.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
 gi|218693989|ref|YP_002401656.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
 gi|218698893|ref|YP_002406522.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
 gi|227884465|ref|ZP_04002270.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
 gi|237707473|ref|ZP_04537954.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|253774486|ref|YP_003037317.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160594|ref|YP_003043702.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|256020497|ref|ZP_05434362.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
 gi|260842721|ref|YP_003220499.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|293408676|ref|ZP_06652515.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
 gi|293413782|ref|ZP_06656431.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
 gi|293418593|ref|ZP_06661028.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
 gi|297517317|ref|ZP_06935703.1| cysteinyl-tRNA synthetase [Escherichia coli OP50]
 gi|300819552|ref|ZP_07099746.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300820228|ref|ZP_07100380.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300903202|ref|ZP_07121133.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300919177|ref|ZP_07135707.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300925801|ref|ZP_07141656.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300929112|ref|ZP_07144605.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300940519|ref|ZP_07155089.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300987704|ref|ZP_07178317.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|301049738|ref|ZP_07196683.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|301301682|ref|ZP_07207817.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|301327827|ref|ZP_07221017.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|307314558|ref|ZP_07594160.1| cysteinyl-tRNA synthetase [Escherichia coli W]
 gi|312970621|ref|ZP_07784802.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331651486|ref|ZP_08352506.1| cysteine--tRNA ligase [Escherichia coli M718]
 gi|331656583|ref|ZP_08357545.1| cysteine--tRNA ligase [Escherichia coli TA206]
 gi|331661914|ref|ZP_08362837.1| cysteine--tRNA ligase [Escherichia coli TA143]
 gi|331666881|ref|ZP_08367755.1| cysteine--tRNA ligase [Escherichia coli TA271]
 gi|331672057|ref|ZP_08372853.1| cysteine--tRNA ligase [Escherichia coli TA280]
 gi|331676195|ref|ZP_08376907.1| cysteine--tRNA ligase [Escherichia coli H591]
 gi|331681920|ref|ZP_08382553.1| cysteine--tRNA ligase [Escherichia coli H299]
 gi|332281678|ref|ZP_08394091.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
 gi|29336539|sp|Q8FK44|SYC_ECOL6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123266145|sp|Q1RF08|SYC_ECOUT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629813|sp|A7ZIT5|SYC_ECO24 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629814|sp|A7ZXI1|SYC_ECOHS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629815|sp|A1A8J2|SYC_ECOK1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631652|sp|Q0T776|SYC_SHIF8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082063|sp|B1IZ75|SYC_ECOLC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710841|sp|B6I0H1|SYC_ECOSE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735055|sp|B7ME49|SYC_ECO45 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735056|sp|B7NL20|SYC_ECO7I RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735057|sp|B7M4M9|SYC_ECO8A RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781679|sp|B7L7F3|SYC_ECO55 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781680|sp|B7MRI9|SYC_ECO81 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|26106935|gb|AAN79119.1|AE016757_23 Cysteinyl-tRNA synthetase [Escherichia coli CFT073]
 gi|91071175|gb|ABE06056.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Escherichia coli
           UTI89]
 gi|115511907|gb|ABI99981.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|157065730|gb|ABV04985.1| cysteinyl tRNA synthetase [Escherichia coli HS]
 gi|157077784|gb|ABV17492.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
 gi|169756021|gb|ACA78720.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|190907370|gb|EDV66967.1| cysteinyl tRNA synthetase [Escherichia coli F11]
 gi|192929199|gb|EDV82809.1| cysteinyl tRNA synthetase [Escherichia coli E22]
 gi|192958997|gb|EDV89433.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
 gi|194412371|gb|EDX28673.1| cysteinyl tRNA synthetase [Escherichia coli B171]
 gi|194423621|gb|EDX39611.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
 gi|209911001|dbj|BAG76075.1| cysteinyl-tRNA synthase [Escherichia coli SE11]
 gi|218350721|emb|CAU96413.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
 gi|218359858|emb|CAQ97400.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218364206|emb|CAR01871.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
 gi|218368879|emb|CAR16629.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
 gi|218425949|emb|CAR06755.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
 gi|226898683|gb|EEH84942.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|227838551|gb|EEJ49017.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
 gi|242376305|emb|CAQ30998.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325530|gb|ACT30132.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972495|gb|ACT38166.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976705|gb|ACT42375.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|257757868|dbj|BAI29365.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|284920336|emb|CBG33396.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
 gi|291325121|gb|EFE64536.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
 gi|291433840|gb|EFF06813.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
 gi|291471854|gb|EFF14337.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
 gi|294494083|gb|ADE92839.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|300298494|gb|EFJ54879.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
 gi|300404775|gb|EFJ88313.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
 gi|300407683|gb|EFJ91221.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
 gi|300413722|gb|EFJ97032.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
 gi|300418111|gb|EFK01422.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
 gi|300454692|gb|EFK18185.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
 gi|300462904|gb|EFK26397.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|300527013|gb|EFK48082.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
 gi|300527878|gb|EFK48940.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
 gi|300843179|gb|EFK70939.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
 gi|300845630|gb|EFK73390.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
 gi|306905876|gb|EFN36399.1| cysteinyl-tRNA synthetase [Escherichia coli W]
 gi|307552429|gb|ADN45204.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|307628004|gb|ADN72308.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
 gi|309700788|emb|CBJ00084.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
 gi|310337270|gb|EFQ02408.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315059799|gb|ADT74126.1| cysteinyl-tRNA synthetase [Escherichia coli W]
 gi|315256355|gb|EFU36323.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
 gi|315289989|gb|EFU49378.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
 gi|315294314|gb|EFU53665.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
 gi|315299089|gb|EFU58343.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
 gi|320180178|gb|EFW55115.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|320201474|gb|EFW76054.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323160878|gb|EFZ46803.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
 gi|323170660|gb|EFZ56310.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323184846|gb|EFZ70216.1| cysteinyl-tRNA synthetase [Escherichia coli 1357]
 gi|323379632|gb|ADX51900.1| cysteinyl-tRNA synthetase [Escherichia coli KO11]
 gi|323945190|gb|EGB41250.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
 gi|323952862|gb|EGB48730.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
 gi|323958529|gb|EGB54234.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
 gi|323965083|gb|EGB60543.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
 gi|323975981|gb|EGB71074.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324006401|gb|EGB75620.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
 gi|324010562|gb|EGB79781.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
 gi|324019545|gb|EGB88764.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
 gi|324116764|gb|EGC10678.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
 gi|327254874|gb|EGE66490.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
 gi|331050759|gb|EGI22816.1| cysteine--tRNA ligase [Escherichia coli M718]
 gi|331054831|gb|EGI26840.1| cysteine--tRNA ligase [Escherichia coli TA206]
 gi|331060336|gb|EGI32300.1| cysteine--tRNA ligase [Escherichia coli TA143]
 gi|331066105|gb|EGI37989.1| cysteine--tRNA ligase [Escherichia coli TA271]
 gi|331071046|gb|EGI42405.1| cysteine--tRNA ligase [Escherichia coli TA280]
 gi|331076253|gb|EGI47535.1| cysteine--tRNA ligase [Escherichia coli H591]
 gi|331081122|gb|EGI52287.1| cysteine--tRNA ligase [Escherichia coli H299]
 gi|332104030|gb|EGJ07376.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
 gi|332341889|gb|AEE55223.1| cysteinyl-tRNA synthetase CysS [Escherichia coli UMNK88]
 gi|332760809|gb|EGJ91097.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|333007742|gb|EGK27218.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333008207|gb|EGK27682.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
 gi|333009963|gb|EGK29398.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333020797|gb|EGK40057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 461

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|146341598|ref|YP_001206646.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146194404|emb|CAL78429.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Bradyrhizobium
           sp. ORS278]
          Length = 469

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 231/474 (48%), Positives = 303/474 (63%), Gaps = 26/474 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R+   F  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG
Sbjct: 1   MDLRLYDTASREKRPFVPLDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRRIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITD+DDKI  RA +++P +P+N+AI  +T     QF  DT  L  L PT +
Sbjct: 61  AEHVTYVRNITDVDDKINARAARDYPGLPLNEAIRKVTEVTANQFHSDTAALGSLPPTFE 120

Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT+ +         M+ LI+ +I  GHAYEA  E++FDT S+P+YG+ S RK+++Q  
Sbjct: 121 PRATDFVLPRPDGKADMVTLIEQLIARGHAYEAGGEVLFDTRSMPDYGALSGRKLEDQLA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G RV    HKKNPADF+LWK+S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARVAVDAHKKNPADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHG 240

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDLIFPHHENEIAQS CA      AN W+HN F+ +EG KMSKS GNF+TI +LL   
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTSVMANYWLHNEFVQVEGAKMSKSLGNFVTIRDLLAD- 299

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLS 353
                 WP  V+RL ML  HYR P D+TV+ L E+   L  W + +        +PA+++
Sbjct: 300 ------WPGEVLRLNMLKMHYRSPADWTVKGLEESAKTLDDWYRVAADAPGEQPEPAIIN 353

Query: 354 ALYNDLNTVSAIQALHKL-ARESTKNHDLLPIFNASAHILGI--------EVCKEHLNKN 404
           AL +D+NT   I  LH L AR ++ +      F  S    G         E  K+     
Sbjct: 354 ALLDDINTPLMIAELHALRARAASGSEVDRAAFAGSLRYFGFLSETATLWEARKQQAKGV 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  +E L+ ER      K F  +D +R +L + G +L+D K   +G+ +T W+
Sbjct: 414 DAAEVEGLIAERTAARARKDFKESDRLRDELAAMGVVLKDGK-GADGKPVTTWE 466


>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
 gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
 gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 476

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 188/496 (37%), Positives = 257/496 (51%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M     IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR  
Sbjct: 1   MMNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                +TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P 
Sbjct: 61  GY--PLTYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P+AT +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV
Sbjct: 113 IEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG D
Sbjct: 173 EVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGN 284
           L FPHHENEIAQS  A                        W+HNGF+ ++G KMSKS GN
Sbjct: 233 LQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGN 292

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           F TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  + 
Sbjct: 293 FFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 345

Query: 345 GIID-----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHI 391
              +               +A+ +D  TV A+  L +LA E  K +D  L     A   I
Sbjct: 346 PAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGI 405

Query: 392 LG------IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +G      IE  +     +   +  IE L+  R      K ++ +D IR  L     ILE
Sbjct: 406 IGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D          T W++
Sbjct: 466 DS------AGGTTWRR 475


>gi|168206821|ref|ZP_02632826.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170661739|gb|EDT14422.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 466

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/488 (35%), Positives = 246/488 (50%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y   + 
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +  I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEE------GTTVKKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIR  ML  HYR+ ++F+   L  A+  + +      +   +   V             
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     +  + +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++    N++  IE L+ +R    K + F+ AD IR +L+ +G ILED       
Sbjct: 406 LG--MFQKSTKGNLAEEIEALIAKRQQARKDRDFALADKIRDELKDRGIILEDT------ 457

Query: 452 QRMTRWKQ 459
            +  RWK 
Sbjct: 458 PQGVRWKM 465


>gi|269940102|emb|CBI48478.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 466

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N+   KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIGNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|255659332|ref|ZP_05404741.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848414|gb|EEX68421.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 477

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 166/496 (33%), Positives = 244/496 (49%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ R+  EF+ + P  + +Y CG T Y+  HIGNARP + +DV+ R       + 
Sbjct: 2   LKVYNTMTRRKEEFKPLKPGEVSIYCCGVTPYNHPHIGNARPFVTWDVIRRYFAKKGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +E            I+ +  + + +    L        PR
Sbjct: 61  -VHYIQNFTDVDDKIINAANKE------GVTWKDISDRYIKAYFEAMDALNVRHADVYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  +P++I ++Q +I  G+AY  +  ++ +      +YG  S R +D+ + G R+    
Sbjct: 114 VSETMPEIIAMVQKLIDKGYAYVIDNGDVYYSVEKFSHYGKLSGRSLDDMQAGARIEVNT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP W+SPWG+GRPGWHIECS MS  YLGK FD HGGG DLIFP
Sbjct: 174 AKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSLKYLGKKFDFHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADR-IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQS          A  W+HNGF+ +   KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQSQACIGDDHSFAQYWLHNGFITIHNEKMSKSKNNFFTVKDIL-------KEY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
           P  VIR  +L THYR P+DF+ +RL EA+  L +   T      +               
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLKEAQTSLGRLQNTKAYVDELSAKQGESDTAAELAA 346

Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLLPIFN 386
                  A   A+ +D NT  AI  +  L+++                      +  ++ 
Sbjct: 347 KAEELRKAFYEAMDDDFNTALAISQMFALSKDINIYYQEVVNGTKAFDAADFKKVAAVYA 406

Query: 387 ASAHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             A I+GI   +E    +       +E ++  R    K K ++ AD IR  L+  G +LE
Sbjct: 407 EMAEIIGIFEQQEKAAADDGLTDKLMEIIITLRQDARKEKNWAVADKIRDALKDAGVVLE 466

Query: 444 DYKNPDNGQRMTRWKQ 459
           D           RWK+
Sbjct: 467 DT------PSGVRWKK 476


>gi|323938475|gb|EGB34726.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
          Length = 461

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   +   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGK-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|15926207|ref|NP_373740.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|148266989|ref|YP_001245932.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393036|ref|YP_001315711.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156978858|ref|YP_001441117.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253315639|ref|ZP_04838852.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|255005323|ref|ZP_05143924.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|269202152|ref|YP_003281421.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|295406906|ref|ZP_06816709.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296275775|ref|ZP_06858282.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297246270|ref|ZP_06930119.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|21264022|sp|Q99W73|SYC_STAAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56749452|sp|Q932G0|SYC_STAAM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171769940|sp|A7WYU7|SYC_STAA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082076|sp|A6TZ06|SYC_STAA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082077|sp|A5IQ83|SYC_STAA9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13700420|dbj|BAB41718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|46395518|dbj|BAB56692.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|147740058|gb|ABQ48356.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945488|gb|ABR51424.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|156720993|dbj|BAF77410.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|262074442|gb|ACY10415.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|285816229|gb|ADC36716.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294968137|gb|EFG44163.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176868|gb|EFH36126.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|312829025|emb|CBX33867.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128822|gb|EFT84821.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329727911|gb|EGG64360.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 466

 Score =  571 bits (1472), Expect = e-161,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|257795372|ref|ZP_05644351.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258408941|ref|ZP_05681222.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420421|ref|ZP_05683364.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258439342|ref|ZP_05690274.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444082|ref|ZP_05692419.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258446350|ref|ZP_05694508.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448443|ref|ZP_05696558.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258453799|ref|ZP_05701773.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282894964|ref|ZP_06303187.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282928866|ref|ZP_06336457.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|257789344|gb|EEV27684.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257840292|gb|EEV64755.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843611|gb|EEV68017.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257847679|gb|EEV71678.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850752|gb|EEV74697.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257854944|gb|EEV77889.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858312|gb|EEV81199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257864055|gb|EEV86809.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|282589474|gb|EFB94563.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282762646|gb|EFC02783.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
          Length = 471

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 261/483 (54%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  
Sbjct: 65  N--VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------T 342
              V+R  M+  HYR PI++ ++ +  A   L +   +                      
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
               I     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468

Query: 452 QRM 454
           +R 
Sbjct: 469 KRG 471


>gi|194099737|ref|YP_002002872.1| CysS [Neisseria gonorrhoeae NCCP11945]
 gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
 gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 475

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 256/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 6   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P  +P+AT
Sbjct: 64  TYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPDIEPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 118 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 177

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 178 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 237

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 238 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 298 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 350

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 351 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 410

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 411 NPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDS---- 466

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 467 --AGGTTWRR 474


>gi|57634618|ref|NP_371054.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
          Length = 476

 Score =  571 bits (1472), Expect = e-160,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 261/483 (54%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 10  KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 69

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  
Sbjct: 70  N--VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 122 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 181

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 182 EHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 241

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 242 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 293

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------T 342
              V+R  M+  HYR PI++ ++ +  A   L +   +                      
Sbjct: 294 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 353

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
               I     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 354 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 413

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 414 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 473

Query: 452 QRM 454
           +R 
Sbjct: 474 KRG 476


>gi|282915852|ref|ZP_06323617.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282320148|gb|EFB50493.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 471

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 262/483 (54%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  
Sbjct: 65  N--VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMEDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------T 342
              V+R  M+  HYR PI++ ++ +  A   L +   +                      
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
               I     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468

Query: 452 QRM 454
           +R 
Sbjct: 469 KRG 471


>gi|167550932|ref|ZP_02344688.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205324269|gb|EDZ12108.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
          Length = 461

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGTDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
 gi|239999926|ref|ZP_04719850.1| CysS [Neisseria gonorrhoeae 35/02]
 gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
 gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
 gi|240081823|ref|ZP_04726366.1| CysS [Neisseria gonorrhoeae FA19]
 gi|240114660|ref|ZP_04728722.1| CysS [Neisseria gonorrhoeae PID18]
 gi|240116861|ref|ZP_04730923.1| CysS [Neisseria gonorrhoeae PID1]
 gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
 gi|240122495|ref|ZP_04735451.1| CysS [Neisseria gonorrhoeae PID332]
 gi|240127206|ref|ZP_04739867.1| CysS [Neisseria gonorrhoeae SK-93-1035]
 gi|260441533|ref|ZP_05795349.1| CysS [Neisseria gonorrhoeae DGI2]
 gi|81311142|sp|Q5F5D6|SYC_NEIG1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
          Length = 473

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 256/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 349 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 NPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDS---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 465

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 175/486 (36%), Positives = 259/486 (53%), Gaps = 52/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL R+  EF  I P   R+Y CGPTVY++ H+GNARPM+VFD+L R L Y   
Sbjct: 1   MTMKIYNTLTREKDEFVPIKPGEARIYACGPTVYNYIHVGNARPMVVFDILRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V + +N TD+DDK+I RA +E        A++ +  K    + +D   L     T  
Sbjct: 61  K--VLFAQNFTDVDDKMIRRANEE------GVAVAEVAEKYIAAYREDAAGLHVREATFH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT +I  ++ LI+ +   G+AY ++ ++ F   +   YG  S + +++ + G RV   
Sbjct: 113 PRATENIADILALIRTLEQKGYAYASDGDVYFRAHAFKEYGKLSHQPLEDLEAGARVDVS 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+ H+LG+  DIH GG DLIF
Sbjct: 173 ERKEDPVDFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMARHFLGQTIDIHCGGQDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA+     A+ W+HNG++N++ RKMSKS GNF T+ E+          +
Sbjct: 233 PHHENEIAQSECANDA-PFAHYWMHNGYINIDNRKMSKSLGNFFTVREV-------AAKY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKG 345
               IR  ML   YR PI+F+ + + ++   L +  +                  S +  
Sbjct: 285 GYEPIRFLMLSAQYRTPINFSDEIMEQSVAALDRLYRCREALKDALRQAGETPADSAAVS 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHILGI 394
                  +A+ +DLNT  A+  L +L +E                    +F     +LG+
Sbjct: 345 AWQEKFDAAMDDDLNTADALAVLFELVKEINTRVAEGTAGADWLKGAAGLFGTFCDVLGL 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E   + +   +E L+++R    K K F +AD IR +L +KG +L+D        + 
Sbjct: 405 LY--ERKERTLDAEVEVLIEKRRQARKAKDFKTADAIRDELSAKGIVLKDT------PQG 456

Query: 455 TRWKQK 460
            +W+ K
Sbjct: 457 VKWEYK 462


>gi|283469822|emb|CAQ49033.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 466

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 476

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 188/496 (37%), Positives = 257/496 (51%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M     IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR  
Sbjct: 1   MMNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                +TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P 
Sbjct: 61  GY--PLTYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P+AT +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV
Sbjct: 113 IEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG D
Sbjct: 173 EVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGN 284
           L FPHHENEIAQS  A                        W+HNGF+ ++G KMSKS GN
Sbjct: 233 LQFPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGN 292

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           F TI E+L       + +   V+R  +L  HYR P++++   L +A+  L++   T  + 
Sbjct: 293 FFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 345

Query: 345 GIID-----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHI 391
              +               +A+ +D  TV A+  L +LA E  K +D  L     A   I
Sbjct: 346 PAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGI 405

Query: 392 LG------IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +G      IE  +     +   +  IE L+  R      K ++ +D IR  L     ILE
Sbjct: 406 IGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D          T W++
Sbjct: 466 DS------AGGTTWRR 475


>gi|74311083|ref|YP_309502.1| cysteinyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|109894944|sp|Q3Z4P5|SYC_SHISS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|73854560|gb|AAZ87267.1| cysteine tRNA synthetase [Shigella sonnei Ss046]
 gi|323163965|gb|EFZ49773.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 461

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYAADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTEKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|329313250|gb|AEB87663.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
          Length = 466

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPRGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|297590580|ref|ZP_06949219.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297576879|gb|EFH95594.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312439051|gb|ADQ78122.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193893|gb|EFU24287.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 466

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N  +  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|325496424|gb|EGC94283.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 461

 Score =  571 bits (1471), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNQMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|260853742|ref|YP_003227633.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|260866682|ref|YP_003233084.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257752391|dbj|BAI23893.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|257763038|dbj|BAI34533.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323153431|gb|EFZ39686.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
 gi|323178201|gb|EFZ63779.1| cysteinyl-tRNA synthetase [Escherichia coli 1180]
          Length = 461

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYIALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|301020339|ref|ZP_07184446.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
 gi|300398784|gb|EFJ82322.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
          Length = 461

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMITEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|257424643|ref|ZP_05601070.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427311|ref|ZP_05603710.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429947|ref|ZP_05606331.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432649|ref|ZP_05609009.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435553|ref|ZP_05611601.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903117|ref|ZP_06311008.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904907|ref|ZP_06312765.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907857|ref|ZP_06315692.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910170|ref|ZP_06317974.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913362|ref|ZP_06321151.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918317|ref|ZP_06326054.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923279|ref|ZP_06330959.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957327|ref|ZP_06374780.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500408|ref|ZP_06666259.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509353|ref|ZP_06668064.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293523940|ref|ZP_06670627.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257272213|gb|EEV04336.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275504|gb|EEV06977.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257279144|gb|EEV09745.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282064|gb|EEV12199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284744|gb|EEV14863.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314147|gb|EFB44537.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317451|gb|EFB47823.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322394|gb|EFB52716.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325562|gb|EFB55870.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328241|gb|EFB58519.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331732|gb|EFB61243.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596072|gb|EFC01033.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790778|gb|EFC29593.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920903|gb|EFD97964.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095413|gb|EFE25674.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467450|gb|EFF09965.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
          Length = 471

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 260/483 (53%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N  +  I  K    F +D   L     T  
Sbjct: 65  N--VEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------T 342
              V+R  M+  HYR PI++ ++ +  A   L +   +                      
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
               I     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  +  ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 409 LGVPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468

Query: 452 QRM 454
           +R 
Sbjct: 469 KRG 471


>gi|83310335|ref|YP_420599.1| cysteinyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|109894907|sp|Q2W7Y5|SYC_MAGMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|82945176|dbj|BAE50040.1| Cysteinyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 459

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 217/480 (45%), Positives = 276/480 (57%), Gaps = 45/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R    F+ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL+  Y 
Sbjct: 1   MPLVLYNTLTRTKDVFEPLVPGHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLKTLY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YVRNITD+DDKI  RA++        + IS IT + T  F +D   L CL P  +
Sbjct: 60  -PSVRYVRNITDVDDKINARAKES------GEPISAITERTTAMFHEDIGALNCLLPDVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QMI +I+ +I  G AY A   ++F   ++ +YG+ SRR  DE   G RV   
Sbjct: 113 PRATAHITQMIAMIERLIAKGFAYAAEGHVLFAVGAMADYGALSRRSSDEMIAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK+P DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGG DL+F
Sbjct: 173 PYKKDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSLQHLGETFDIHGGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA+  +  A  W+HNG+L +EG KMSKS GNF T+ +LL+         
Sbjct: 233 PHHENEIAQSTCANG-KPFARFWLHNGWLMVEGEKMSKSLGNFFTVRDLLD-------QA 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLS 353
           P   IRLAML THY +P D+T   L +A+  L +          ID           VL+
Sbjct: 285 PGEAIRLAMLTTHYHQPFDWTADGLKQAKATLDRLYTALRGVADIDANGYEGEAPLEVLA 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIEVCKEH------- 400
           AL +DLNT  AI  LH+LA    K   L           AS H+LG+             
Sbjct: 345 ALKDDLNTPLAISHLHELAGALNKATGLEDKARRKGALLASGHLLGLLYQDPEAWFKGTG 404

Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +      IE  +  R    K + F+ AD IR+ L ++G +LED      G   T WK+
Sbjct: 405 AADGPSDAEIEAAITARAEARKSRNFAEADRIRQDLAARGVVLED------GAGGTTWKR 458


>gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 473

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 256/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWGRGRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 296 VL-------KQYDLEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVC 397
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQR 408

Query: 398 KEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                       +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTAFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|187629787|sp|A8MLB7|SYC_ALKOO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 464

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 174/485 (35%), Positives = 253/485 (52%), Gaps = 52/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF  ++   +RMY CGPTVY++ HIGNAR  +VFD L R L Y   + 
Sbjct: 1   MKLYNTLTRKKEEFIPLEEGKVRMYACGPTVYNYFHIGNARTFMVFDALRRYLIYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII RA +E        A   I+ +  +++  D   L        P+
Sbjct: 60  -VTFVQNFTDVDDKIIRRANEE------GVAPEEISERFIKEYFYDAGTLGIEKADIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  +  ++  GHAYE+N ++ FD S    YG  S++ +++ + G R+    +
Sbjct: 113 VTENMAEIIAFVAKLVEKGHAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEINEY 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK +   EP WESPWG GRPGWHIECSAM+  YLG+  DIHGGG DL+FPH
Sbjct: 173 KKNPLDFALWKSAKAGEPSWESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +K AN W+H G+LN++ +KMSKS  NF T  E+ E        +  
Sbjct: 233 HENEIAQSEACSG-KKFANYWLHVGYLNVDNKKMSKSLNNFFTPREISE-------EFDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
             +R  ML  HYR PI+F+   L  A+  L +      +   +                 
Sbjct: 285 ENLRFFMLSAHYRNPINFSRDLLEAAKNGLDRLYTGKNNLEYLLENAAEREVSEEEKNFI 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARES-------TKNHDLLPIFNASAHILGI 394
                     + A+ +D NT   I  +  L RE             +   ++    + G+
Sbjct: 345 HGLQSFKNQFIDAVDDDFNTADGIAVIFDLVREINSHISEKNSKKAVEASYDLLMELTGV 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +   +++   IE+L+ ER    K K F+ +D IR  L+ KG +LED        + 
Sbjct: 405 LGLLKREAEDLEEEIERLIAERQQARKDKNFALSDKIRDDLKEKGIVLEDT------AQG 458

Query: 455 TRWKQ 459
            +W++
Sbjct: 459 VKWRK 463


>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 491

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 185/511 (36%), Positives = 274/511 (53%), Gaps = 78/511 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R   EF+ I P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR L+    + 
Sbjct: 2   LKIYNTLARDKQEFKPIIPNTVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        ++I  +T +      +D   L    P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIKRAAENK------ESIHALTQRFIDAMHEDADTLGVQRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ ++  +  +G AY+A + ++ +       YG  S + +++ + G RV    
Sbjct: 114 ATQYVPQMLEMVAQLEQNGLAYQAADGDVNYAVRKFDGYGKLSGKSLEDLRAGERVEVVS 173

Query: 184 HKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   E     W+S WG+GRPGWH+ECSAM+S  LG  FDIHGGG DL
Sbjct: 174 DKHDPLDFVLWKHAKDGEADEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A R  +  N W+HNGF+ ++  KMSKS GNF TI E+L       +
Sbjct: 234 QFPHHENEIAQSEGAHRC-QYVNYWMHNGFVRVDNEKMSKSLGNFFTIREVL-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------- 338
            + A V+R  +L  HYR P++++   L +A+  L++                        
Sbjct: 286 KYDAEVVRFFILRAHYRSPLNYSDVHLDDAKGALTRLYTALKSAPSSSILPPEGEGSEFP 345

Query: 339 ----QTSTSKGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFN 386
               + +  +G+ID          SA+ +D NT  AI  L  LA E  ++  +       
Sbjct: 346 SPSGRGARGEGVIDWDTPHAARFKSAMDDDFNTPEAIAVLFDLANEVNRSQSVTAAAELK 405

Query: 387 ASAHILGI------EVCKEHLNKNISI------------AIEKLVQERLILLKMKKFSSA 428
             A +LG+      +  +   + N+++             I+ L++ R+   K K F+ A
Sbjct: 406 TLAGVLGLLQRDPQDFLQGRASMNLTVPTPTLEASGGALDIDALIEARIAAKKSKNFAEA 465

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           D IRK+L   G +LED        + T W++
Sbjct: 466 DRIRKELLGAGIVLEDT------PQGTTWRR 490


>gi|82750237|ref|YP_415978.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|109894947|sp|Q2YSD1|SYC_STAAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|82655768|emb|CAI80168.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 466

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N  +  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     +N W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFSNYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|329298451|ref|ZP_08255787.1| cysteinyl-tRNA synthetase [Plautia stali symbiont]
          Length = 461

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  E + I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEELKPIHACEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESIETLTNRMIAEMHKDFAALGILPPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I LI  +I  GHAY A+  +++FD  S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATRHIGEIIELIGKLIDRGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA       N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEVAQSTCAHDG-PYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++     L +A   L +            T       +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNDGEDNLNQARAALERLYTALRHTDASATPAGGEAFEARFRTA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +           L       A +LGI            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKSEDKAAADALAAKLRQLADVLGILQQDPEQFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +N +    IE  V+ R      K ++ AD  R +L   G I+ED      G + + W+
Sbjct: 406 AQVNADEVAEIEHWVKTRANARAAKDWAQADIARDKLNELGVIVED------GPKGSSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
           NRL30031/H210]
 gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
           NRL30031/H210]
          Length = 473

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 186/490 (37%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------Q 339
           +L       + +   V+R  +L  HYR P++++   L +A+  L++             +
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPATAFE 348

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--- 394
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G+   
Sbjct: 349 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408

Query: 395 ---EVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              E  +     +   +  I+ L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 DPTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|240114101|ref|ZP_04728591.1| CysS [Neisseria gonorrhoeae MS11]
 gi|240126656|ref|ZP_04739542.1| CysS [Neisseria gonorrhoeae SK-92-679]
          Length = 473

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 187/490 (38%), Positives = 256/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 4   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  + ++  Q   +D   L  L P  +P+AT
Sbjct: 62  TYVRNITDIDDKIIARAAEN------GETIGELNARFIQAMHEDADALGVLRPDIEPKAT 115

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T  +    +  
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
                        +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 349 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  IE L+  R      K ++ +D IR  L     ILED     
Sbjct: 409 NPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDS---- 464

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 465 --AGGTTWRR 472


>gi|90580099|ref|ZP_01235907.1| cysteinyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438984|gb|EAS64167.1| cysteinyl-tRNA synthetase [Vibrio angustum S14]
          Length = 460

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/481 (37%), Positives = 254/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALGMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A N +++F+ S   +YG  S++ +D+ + G RV    
Sbjct: 114 ATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
              +R  ++  HYR  ++++   L +A   L +   +         A            A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEDNLKQARSALERLYTSLRGLDTSVEAAGGEEFVTRFKEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           L       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKTDDVATASALGARMRELADVLGLLSQEPEAFLQGG 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               +    IE L+Q+RL     K +++AD  R +L + G ILED      G + T W++
Sbjct: 406 AGEDDNVAEIEALIQQRLDARAAKDWAAADEARDKLLAMGIILED------GAQGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|296101636|ref|YP_003611782.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295056095|gb|ADF60833.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 461

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIVEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++F   + P YGS SR+ +D+ + G RV    
Sbjct: 114 ATHHIHEIIDITEKLIARGHAYVADNGDVMFSVPTDPTYGSLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LGK FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +             +      +   +  
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVEAAGGEAFEARFVEV 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K+ D+             + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALAAHLRKLSSVLGLLEQEPDAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+  RL   + K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALINARLEARQAKDWAAADAARNRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|294496962|ref|YP_003560662.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294346899|gb|ADE67228.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 465

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 165/487 (33%), Positives = 255/487 (52%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL R+   F  ++ + ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IKLYNTLTRQKETFVPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A++      + + +  I ++    + +DT+ L C      PR
Sbjct: 62  -VEYVSNFTDVDDKLIKAAKE------LGEDVPTIANRFIDAYFEDTSALGCKHADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I  ++  G+AYE+  ++ + T     YG  S + IDE + G R+     
Sbjct: 115 VTENMDIIIEFIDELVKKGYAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            ++R  +L  HYR PI++  + L        +      +                     
Sbjct: 287 SLLRFFILSVHYRHPINYNEEILENTRKGFERLQTAYGNLTHRLEAATNLQEDASEWFEK 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPI----FNASAHIL 392
              +    +  + +D NT +AI  L +LA+++         + D++      F      +
Sbjct: 347 LKELRETFVEEMDDDFNTANAISVLFELAKQANLYLLEQTTSTDVIEAFIKEFKELGAAI 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI   +  L   +   I++L+Q R+   K + F  AD IR +L++K  ILED        
Sbjct: 407 GITFGEAEL---LDEEIDQLIQGRIQARKDRNFQLADQIRDELKAKNIILEDT------A 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|258422624|ref|ZP_05685530.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257847196|gb|EEV71204.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 471

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 174/483 (36%), Positives = 264/483 (54%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  
Sbjct: 65  N--VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMNDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEI 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGIID 348
              V+R  M+  HYR PI++ ++ +  A   L +   +                 +  ID
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQAYID 348

Query: 349 P------AVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
                     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468

Query: 452 QRM 454
           +R 
Sbjct: 469 KRG 471


>gi|328544357|ref|YP_004304466.1| Cysteine tRNA synthetase (Cysteine--tRNA ligase) [polymorphum
           gilvum SL003B-26A1]
 gi|326414099|gb|ADZ71162.1| Cysteine tRNA synthetase (Cysteine--tRNA ligase) [Polymorphum
           gilvum SL003B-26A1]
          Length = 514

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 259/506 (51%), Positives = 319/506 (63%), Gaps = 49/506 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++YNTL R   +F  IDP+N+RMYVCGPTVYDFAHIGNARP IVFDVLYRLLR+ YG
Sbjct: 9   KGLRLYNTLTRAKQDFVPIDPANVRMYVCGPTVYDFAHIGNARPAIVFDVLYRLLRHLYG 68

Query: 63  EKCVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
              VTYVRNITD+DDKI  RA        E   + +NDAI+ +T K   Q+  D + L C
Sbjct: 69  ADRVTYVRNITDVDDKINARALRDFGPEIEAGRMSLNDAIARVTEKTADQYHSDVSALGC 128

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L PTH+PRAT HI  MI +I  +I  GHAYEA  E++FD +S+P YG  S+R +DEQ  G
Sbjct: 129 LPPTHEPRATEHIEGMIVMIGTLIERGHAYEAAGEVLFDVASMPAYGGLSKRNLDEQIAG 188

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            RV    HKKNP DF+LWK+S+  EPGW SPWGRGRPGWHIECS MS H+LGKVFDIHGG
Sbjct: 189 ARVAVDSHKKNPGDFVLWKQSSAEEPGWGSPWGRGRPGWHIECSVMSEHHLGKVFDIHGG 248

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDLIFPHHENEIAQSCCA   +K AN W+HNGF+ +EGRKMSKS GNF+TI++LL T  
Sbjct: 249 GLDLIFPHHENEIAQSCCAHGTDKMANYWLHNGFVQVEGRKMSKSEGNFVTIHDLLHTDT 308

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPA 350
           FGGR WP  V+RLAMLMTHYREPIDF+V+RL EA   L+ W +       S +      A
Sbjct: 309 FGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEANANLTNWLRQIDEHVLSRNSPTAYSA 368

Query: 351 VLSA----------------LYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILG 393
           +L A                L +DL   + I  LH ++ + S        +      ILG
Sbjct: 369 ILDAAQNNDQNDNLAISVEVLSDDLAMPNVIAQLHGMSTDISLGVRSPRSLAWDMMGILG 428

Query: 394 ----IEVCKEHLNKNISIAIEKLVQERLI---------------LLKMKKFSSADYIRKQ 434
               I+       K     + + + ERL                L+K K F+ AD IR  
Sbjct: 429 FLGIIDAEVLRRQKVEPEGLSQRIAERLAIQDAADAAKAAGDKDLMKQK-FAEADRIRAD 487

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L ++G +L+D K+P  GQR+T W+ K
Sbjct: 488 LAAEGILLKDGKDPQTGQRVTTWEVK 513


>gi|215485603|ref|YP_002328034.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|254781678|sp|B7UKK3|SYC_ECO27 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|215263675|emb|CAS08007.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
          Length = 461

 Score =  570 bits (1470), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGR-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|306813010|ref|ZP_07447203.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
 gi|305853773|gb|EFM54212.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
          Length = 461

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+ P DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRTPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|323191193|gb|EFZ76457.1| cysteinyl-tRNA synthetase [Escherichia coli RN587/1]
          Length = 461

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKGGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|167758881|ref|ZP_02431008.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
 gi|167663621|gb|EDS07751.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
          Length = 468

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 179/491 (36%), Positives = 256/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL ++  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKLYNTLSKQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RA +E        +   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKRAIEE------GVSSDEISKRYIAECKKDMDGMNIKPATKNPM 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +IQ +I  G+AYE N  + + T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVDMIQTLIDKGYAYEKNGTVYYRTRKFEEYGKLSHKNLDDLRSGERSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSDGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS GNF T+ E+        + 
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREI-------SQQ 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
           +   ++R  ML  HYR P++F+   +  ++  L +    + +   +              
Sbjct: 285 YDLQILRFFMLSAHYRSPLNFSADLMEASKSGLERIVNAADNLKFLLGNAKSESMTQEEE 344

Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
                          A+ +D NT  AI ++  L +      D          L  +    
Sbjct: 345 AAFAKTAEYVQEFERAMDDDFNTADAIASVFDLVKYINTTADADKSKEFLQNLFDLLVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+ V K+   + ++  IEK+++ER    K K F+ AD IR +L +KG +LED +  
Sbjct: 405 TDVLGLIVDKKE--EMLAEDIEKMIEERQAARKAKDFARADAIRDELLAKGIVLEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKK 467


>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229558616|sp|A9VNA2|SYC_BACWK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 465

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 173/489 (35%), Positives = 252/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+   L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 AEMEKFQVAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L   +   IE L+Q+R+   + + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|161504307|ref|YP_001571419.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|187631629|sp|A9MLA7|SYC_SALAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160865654|gb|ABX22277.1| hypothetical protein SARI_02415 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 461

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 177/482 (36%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIEITRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKSEDMTAANAMASHLRKISGVLGLLEQEPDAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|323963293|gb|EGB58857.1| cysteinyl-tRNA synthetase [Escherichia coli H489]
          Length = 461

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANENS------ESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 466

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 166/487 (34%), Positives = 257/487 (52%), Gaps = 53/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF+ I    + MYVCGPTVY++ HIGN R  +VFD + R   Y   + 
Sbjct: 1   MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E      N  +  +  +   ++ KD   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIKKANEE------NVTVKELGDRFINEYYKDADGLNIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  ++++I  G+AYE + ++ F T     YG  S + +D+ + G R+     
Sbjct: 113 ATEFMDEIISFVKDLIDKGYAYEVDGDVYFSTKKFAEYGKLSGQNLDDLQAGARITVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK   P EP WESPWG+GRPGWHIECS M+   LG   DIH GG DL+FPH
Sbjct: 173 KQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +  AN W+H+ +LN+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARNG-KDFANYWMHSAYLNINNKKMSKSLNNFFTTREILER-------YDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIRL ML  HYR P++F+ + L  A+    +   +  +   +   V             
Sbjct: 285 EVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEEMTGVEKEYI 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHI---LG-- 393
                     +  + +D NT  AI  +  L +E            + N S  +   LG  
Sbjct: 345 KVLNSYKEKYIEKMDDDFNTADAIAVIFDLIKEINTHVNTDSSKELVNYSLELIRELGMP 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + + ++    +++  IE L+++R    K + ++ AD IR  L+++G +LED        +
Sbjct: 405 LGILQKSTIVDLNAEIEGLIEQRQKARKDRDWALADKIRDDLKARGIVLEDT------AQ 458

Query: 454 MTRWKQK 460
             RWK++
Sbjct: 459 GVRWKKE 465


>gi|300996966|ref|ZP_07181604.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
 gi|300304371|gb|EFJ58891.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
          Length = 461

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDID+KII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDEKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|254804107|ref|YP_003082328.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 475

 Score =  570 bits (1469), Expect = e-160,   Method: Composition-based stats.
 Identities = 188/490 (38%), Positives = 257/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 6   IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 64  TYVRNITDIDDKIIARAAEN------GETIGKLTARFIQAMHEDADALGVLRPDIEPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +G AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 118 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 177

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS +  G  FDIHGGG DL FPHH
Sbjct: 178 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 237

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 238 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 298 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFG 350

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 351 LSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 410

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  I+ L+  R      K ++ +D IR  L     ILED     
Sbjct: 411 DPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN---- 466

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 467 --AGGTTWRR 474


>gi|254517452|ref|ZP_05129508.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226911201|gb|EEH96402.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 466

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 165/488 (33%), Positives = 249/488 (51%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L RK  EF  + P  I+MYVCGPTVY++ HIGN R  I+FD + R   Y   + 
Sbjct: 1   MRVYNSLTRKKEEFIPLTPGEIKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYFEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +S I  +   ++ KD   L  +  +  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKKANEE------GTTVSDIGDRYIDEYYKDADGLNIMRASINPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I  ++ +I  G+AYE + ++ F T    +YG    + +++ + G R+     
Sbjct: 113 ATEYIQDIIEFVKGLIEKGYAYEVDGDVYFRTKKFESYGKLIGQNLEDLQAGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK   P EP WESPWG GRPGWHIECS M+   LG   DIH GG+DL FPH
Sbjct: 173 KEDPMDFAVWKAQKPGEPAWESPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLAFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+H  FLN+  +KMSKS  NF+T  ++L       + + A
Sbjct: 233 HENEIAQSEALTG-KPFARYWLHGAFLNINNQKMSKSLNNFLTARDIL-------KQYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R  ML  HYR  ++F+   L  A+  + +     ++   +   V             
Sbjct: 285 DVVRFLMLSGHYRVQLNFSDDLLESAKASVERLYNAVSNLENLIDEVKKESMDDKEKAYL 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     +  + +D NT  AI A+  L ++   N             L +     + 
Sbjct: 345 EFLDVYRQRYIEKMDDDFNTADAITAIFDLIKDINTNVSIESSRELCEAALSLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +     ++   IE+L+ ER    K + F+ AD IR  L+++  +LED       
Sbjct: 405 LGI--LQNSTKGSLEEEIERLIAERQQARKDRNFALADKIRNDLKARNIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 457 PQGVRWKK 464


>gi|110799706|ref|YP_697116.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168211251|ref|ZP_02636876.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|122958668|sp|Q0TMM4|SYC_CLOP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110674353|gb|ABG83340.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170710753|gb|EDT22935.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 466

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 171/488 (35%), Positives = 245/488 (50%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL +K  EF  + P  ++MYVCGPTVY+F HIGN R  IVFD + R   Y   + 
Sbjct: 2   IKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +  I     +++ +D   L     T  PR
Sbjct: 61  -VDFVQNFTDIDDKMIKKANEE------GTTVKKIGDTYIKEYYQDADALNIERATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 114 ATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W SPWG GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A  W+H+ F+N+   KMSKS  NF T  E+LE        + A
Sbjct: 234 HENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            VIR  ML  HYR+ ++F+   L  A+  + +      +   +   V             
Sbjct: 286 DVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAYL 345

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     +  + +D NT  AI A+  L +++  N             L +       
Sbjct: 346 ESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGAP 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG  + ++    N+   IE L+ +R    K + F+ AD IR +L+ +G +LED       
Sbjct: 406 LG--MFQKSTKGNLEEEIEALIAKRQQARKDRDFTLADKIRDELKDRGIVLEDT------ 457

Query: 452 QRMTRWKQ 459
            +  RWK 
Sbjct: 458 PQGVRWKM 465


>gi|16128510|ref|NP_415059.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|89107393|ref|AP_001173.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170080109|ref|YP_001729429.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238899807|ref|YP_002925603.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
 gi|300949224|ref|ZP_07163257.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|300954345|ref|ZP_07166803.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|301022849|ref|ZP_07186685.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|135097|sp|P21888|SYC_ECOLI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558631|sp|B1XGC4|SYC_ECODH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|259511830|sp|C4ZUX4|SYC_ECOBW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20664375|pdb|1LI5|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase
 gi|20664376|pdb|1LI5|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase
 gi|20664379|pdb|1LI7|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase With
           Cysteine Substrate Bound
 gi|20664380|pdb|1LI7|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase With
           Cysteine Substrate Bound
 gi|56966182|pdb|1U0B|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase Binary
           Complex With Trnacys
 gi|41206|emb|CAA41983.1| cysteinyl-tRNA synthetase [Escherichia coli K-12]
 gi|145692|gb|AAA23658.1| transfer RNA-Cys synthetase [Escherichia coli]
 gi|1773207|gb|AAB40279.1| cysteinyl-tRNA synthetase [Escherichia coli]
 gi|1786737|gb|AAC73628.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|85674663|dbj|BAE76303.1| cysteinyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169887944|gb|ACB01651.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|238860697|gb|ACR62695.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
 gi|260450291|gb|ACX40713.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
 gi|299881060|gb|EFI89271.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|300318682|gb|EFJ68466.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
 gi|300451342|gb|EFK14962.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
 gi|315135208|dbj|BAJ42367.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
 gi|323943145|gb|EGB39302.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
 gi|227964|prf||1714234A Cys-tRNA synthetase
          Length = 461

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVAMVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 465

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 175/488 (35%), Positives = 255/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF  +D   ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKIFNTMTREKEEFVPLDSDEVKMYVCGPTVYNFFHIGNARTFVVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A+ EH        +  +  K  +++ KD   L     T  PR
Sbjct: 60  -VRFVQNFTDIDDKMIKKAQDEH------ITVKELGDKFIKEYYKDADALHIKRATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  I ++I   +AYE + ++ F T    NYG  S + ID+ + G R+     
Sbjct: 113 ATLYITKIIEFIGDLIDRDYAYEIDGDVYFSTKKFSNYGKLSGQNIDDLRAGARIDVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+   LG+  DIH GG DL+FPH
Sbjct: 173 KKDPMDFAVWKGQKPGEPAWESPWGMGRPGWHIECSCMAHDLLGETIDIHAGGSDLMFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+H+ F+N+  +KMSKS  NF T+ E+LE        +  
Sbjct: 233 HENEIAQSEGRTG-KTFARYWMHSAFVNVNNQKMSKSLNNFFTVREILE-------KYEP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            VIR+ ML  HYR  I+F+++ L   +  L +   + T+                     
Sbjct: 285 DVIRMFMLSGHYRTQINFSMELLDSTKSALDRLYNSITNLENLLDNKEDIPISENEKEYR 344

Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
              G      +  + +D NT  AI  +  L ++   +           D L +       
Sbjct: 345 NKLGKYKQRYIEKMDDDFNTADAISVIFDLVKDINVSINKDSSVEVIRDSLNLIRELGAP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++    +I   IE L+++R I    K ++ +D IR  L+++G +LED       
Sbjct: 405 LGI--LQQSKRGSIEKEIEALIEKRQIARSEKNWALSDKIRDDLKAQGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
               RWK+
Sbjct: 457 PEGVRWKR 464


>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 454

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 185/474 (39%), Positives = 255/474 (53%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++  R   EF  I P  + MYVCG TVYD  HIG+AR M+VFD++ R  R    E 
Sbjct: 2   LVIYDSHARAKREFVPIKPKTVGMYVCGMTVYDRCHIGHARVMVVFDMVVRYFRASGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        ++I  +T +  +    D   L CL PT +PR
Sbjct: 61  -VHYVRNITDIDDKIIARAAENK------ESIRSLTERYIEAMHDDAAALGCLLPTAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M+ +I+++I  GHAY A N ++ FD S+   YG  S R  D+ + G RV    
Sbjct: 114 ATESVGDMVAMIESLIERGHAYRAANGDVYFDVSTFDRYGELSNRNPDDLRAGARVEIDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK   P +P W++P+G GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAEKPGDPSWDAPFGPGRPGWHIECSAMSTRALGATFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+HNGF+ +   KMSKS GNF T+ E++       R + 
Sbjct: 234 HHENEIAQSECATGHH-YVNYWMHNGFVRINEEKMSKSLGNFFTVAEVM-------RQYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALY 356
             VIRL +L +HYR P++++ Q L  A   L++W       PQ  T    +       + 
Sbjct: 286 PEVIRLFVLSSHYRSPLNYSDQNLDAARASLTRWYTAIKDAPQNGTPNPEVMARFRGVMD 345

Query: 357 NDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEH---------LNKNI 405
           +D NT  A+  + +   E  ++ D        A   IL +                ++  
Sbjct: 346 DDFNTPEALAIVFEQISELNRSKDANCAATIKAIGEILNLGQHDPESFLRWAPSSSDQLS 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             AIE+ + ER      K F+++D IR +L++ G +LED          T W++
Sbjct: 406 DEAIEQKIAERASARANKDFAASDRIRDELQAAGIVLEDK------AGQTTWRR 453


>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 466

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 165/488 (33%), Positives = 248/488 (50%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R+  EF  I P  ++MYVCGPTVY++ HIGN R  I+FD + R L Y   + 
Sbjct: 1   MRLYNSLTRQKEEFVPIVPGEVKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+++N TDIDDK+I +A  E         +  +  K   ++ +D   L     T  PR
Sbjct: 60  -VTFIQNFTDIDDKMINKANAE------GITVKELGDKFIDEYYQDADGLQVKRATINPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I +++  ++++I  G AYE + ++ F T     YG    + +++ + G R+     
Sbjct: 113 ATEYIDEVVEFVKDLIDRGFAYEIDGDVYFSTKKFEEYGKLCGQNLEDLQSGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+   LG   DIHGGG+DL FPH
Sbjct: 173 KKDPMDFAVWKSQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHGGGMDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  AN W+H  F+N++ +KMSKS  NF+T  E L       + + +
Sbjct: 233 HENEIAQSEAVTGQK-FANYWMHAAFVNVDNKKMSKSENNFVTAREAL-------KKYNS 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
            VIR  ML  HYR  I+F+ + L  A+  + +      +   +                 
Sbjct: 285 DVIRFLMLSGHYRTQINFSAELLDSAKSSVERLYNCVNNLENLINEVNRKEANDSEKAYL 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT   I  +  L ++   N  +          L +       
Sbjct: 345 KSLDKHREKFIEKMDDDFNTADGISVIFDLIKDINNNVSIDSSSELCEGTLNLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI    E   K++ + I++L+ +R    K + F+ AD IR  L+++  ILED       
Sbjct: 405 LGILQKTEE--KSLEVEIQELIDKRQEARKNRDFALADKIRDDLKARNIILEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 457 PQGVRWKK 464


>gi|309797198|ref|ZP_07691594.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
 gi|308119182|gb|EFO56444.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
          Length = 461

 Score =  569 bits (1468), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQLRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|157146856|ref|YP_001454175.1| cysteinyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|157084061|gb|ABV13739.1| hypothetical protein CKO_02631 [Citrobacter koseri ATCC BAA-895]
          Length = 461

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 60  TLKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + PNYG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKHNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K+ D+             + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANAMASHLRKISGVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGELAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|15612674|ref|NP_240977.1| cysteinyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|11387138|sp|Q9KGF4|SYC_BACHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|10172723|dbj|BAB03830.1| cysteinyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 466

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/486 (37%), Positives = 263/486 (54%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++N+L RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D++ R L+Y   E 
Sbjct: 3   IQVFNSLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMIRRYLKYRGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      + + +  + ++  + + +DT+ L  L   H PR
Sbjct: 62  -VLFVSNFTDVDDKIIRVANE------LGEDVFAVANRFIEAYKQDTSALGVLEADHHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  I+ +   G+AYE   ++ F T     YG  S + ID+   G R+     
Sbjct: 115 VTETMSEIISFIRVLEEKGYAYEQGGDVYFRTRKFKEYGKLSAQSIDDLLSGARIEVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFVLWKAAKEGEVSWDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLKFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C    +  AN W+HNGF+NL+  KMSKS GN +  NE++       R   A
Sbjct: 235 HENEIAQSECMTG-KPMANYWLHNGFINLDNEKMSKSLGNVVLANEMI-------RQHSA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA---- 350
            V+R  ML  HYR PI+F+ + L  A+  L +            Q S   G  +P     
Sbjct: 287 EVLRFFMLSAHYRSPINFSDELLEGAKRGLERLQTAVSSLVHRLQESADFGGTEPWLERI 346

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                  +  + +D N+ + I  L  LA+E+ +               + +FN    +LG
Sbjct: 347 DEFRGRFIEEMDDDFNSANGIAVLFDLAKEANRYLREEQTSKAVLQSFIDLFNELGGVLG 406

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + + ++   + +   IE+L++ER    K K F  AD IR QL+++G ILED        +
Sbjct: 407 VTLNRQE--ELLDEEIERLIEERNEARKAKNFQRADDIRDQLKAEGIILEDT------PQ 458

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 459 GVRWKR 464


>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|187629854|sp|A5WEW9|SYC_PSYWF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 505

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 189/505 (37%), Positives = 257/505 (50%), Gaps = 69/505 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIY+++      F+ +    I MYVCG TVYD+ HIG+AR M+ FDV+ R LR+  
Sbjct: 22  QAALKIYDSMTTNKRSFEPLQAGKIGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLG 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRNITDIDDKII RA +        + I  +T +  +   +D   L C  P  
Sbjct: 82  YE--VNYVRNITDIDDKIIARANEN------GEPIGELTHRFIKAMHEDAAALGCENPDA 133

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT HI +M+ +I  +    HAY A N ++ +   +   YG  S+RK+++ + G+RV 
Sbjct: 134 EPRATEHIDEMLDMIGTLEQKQHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVD 193

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF+LWK +   EP W S WG GRPGWHIECSAMS+  LG  FDIHGGG DL
Sbjct: 194 VDTDKKNPFDFVLWKAAKAGEPQWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDL 253

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A+ W+H GF+N++G KMSKS GNF TI E++       +
Sbjct: 254 QFPHHENEIAQSEAATGC-TYAHNWMHVGFINVDGEKMSKSLGNFFTIREVM-------Q 305

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
            +    IR  +L +HYR  ++F+   L EA   L++  Q   +   +             
Sbjct: 306 KFHPETIRFFILSSHYRSQVNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAAESIES 365

Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------IF 385
                        ++A+ +D NT  AI  L  LA+E  K                     
Sbjct: 366 INAEHAGTHSADFIAAMNDDFNTPQAISVLFSLAKEVNKLARDADDADTQAQLQLQAVQL 425

Query: 386 NASAHILGI------EVCKEHLNKNI-----SIAIEKLVQERLILLKMKKFSSADYIRKQ 434
            A A IL I      E  +  + +          IE L+QERL     K F+ AD IR  
Sbjct: 426 RALAGILNIGQLNPAEFLQAQIGEVAEDQMSDEQIEALIQERLDSKANKNFARADEIRDL 485

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L++ G  LED K        T W++
Sbjct: 486 LQNSGIELEDGK------LGTTWRR 504


>gi|283784327|ref|YP_003364192.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947781|emb|CBG87337.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 461

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 261/482 (54%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPSYGQLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFIDA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    KN D+             + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKNEDMAAANAMASHLRKISAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDGEVAQIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|229845478|ref|ZP_04465607.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811581|gb|EEP47281.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 459

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVERMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWRKQ 459


>gi|293390637|ref|ZP_06634971.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951171|gb|EFE01290.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 469

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 184/483 (38%), Positives = 265/483 (54%), Gaps = 46/483 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY  
Sbjct: 9   PNMLKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLG 68

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  
Sbjct: 69  YD--LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVVEMYKDFDALNILRPDF 120

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT+HIP++I +++ +I  GHAY A+  +++FD  S  +YG  SR+ +++ + G R+ 
Sbjct: 121 EPRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIE 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL
Sbjct: 181 INEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L        
Sbjct: 241 MFPHHENEIAQSCCAHG-NQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN------- 292

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAV 351
            + A  +R  +L  HYR  ++++ + L  A   L +             +        A 
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAFGGENFVDAF 352

Query: 352 LSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVC 397
             A+ +D NT +A+  L ++ARE          K + L       A ILG+      +  
Sbjct: 353 REAMDDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFL 412

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +   ++     IE L+++R      K +++AD  R  L   G ILED      G   T W
Sbjct: 413 QAGSDEGEVAKIEALIKQRNEARTAKDWAAADAARNALTKMGIILED------GPNGTTW 466

Query: 458 KQK 460
           +++
Sbjct: 467 RKQ 469


>gi|110640787|ref|YP_668515.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
 gi|123344273|sp|Q0TKB5|SYC_ECOL5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110342379|gb|ABG68616.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
          Length = 461

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-LYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|298693861|gb|ADI97083.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 466

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++   E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|49482759|ref|YP_039983.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295427067|ref|ZP_06819703.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|56749424|sp|Q6GJD9|SYC_STAAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49240888|emb|CAG39555.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|295128855|gb|EFG58485.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
          Length = 466

 Score =  569 bits (1467), Expect = e-160,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N  +  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  ++  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFVISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|152969054|ref|YP_001334163.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206578467|ref|YP_002239997.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|262041635|ref|ZP_06014829.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|288936751|ref|YP_003440810.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|187629829|sp|A6T5R2|SYC_KLEP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710845|sp|B5Y0K6|SYC_KLEP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150953903|gb|ABR75933.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|206567525|gb|ACI09301.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|259041024|gb|EEW42101.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|288891460|gb|ADC59778.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 461

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +             +      +   + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           +       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDAEVAEIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|229558717|sp|B3E1P0|SYC_GEOLS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 487

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 193/507 (38%), Positives = 251/507 (49%), Gaps = 73/507 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +   F       + MYVCG TVYDF HIG+AR  IVFD++YR LR+   + 
Sbjct: 3   LRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+RN TDIDDKII RA QE            I  +    F +D  RL  L PT +P+
Sbjct: 62  -VTYIRNYTDIDDKIINRANQE------GTDYRTIADRYIATFDEDMDRLGMLRPTIEPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  +I +IQ +I +GHAY  + ++ F   + P Y   S R +D+   G RV     
Sbjct: 115 ATDHIEDIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK S P EP WESPWG+GRPGWHIECSAMS  +LG  FDIHGGG DL+FPH
Sbjct: 175 KRNPMDFALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+   +    W+HNGF+N+   KMSKS GNF TI E+LE        +  
Sbjct: 235 HENEIAQSEGANGC-QFVKYWLHNGFVNINSEKMSKSLGNFFTIREVLEL-------FDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
             +R  +L  HYR P+D++ Q L EA+  LS+  +   +                     
Sbjct: 287 ETLRFFILQAHYRSPLDYSDQNLREAQAGLSRIYEALAALDQALEKPATAIHLPASAAEF 346

Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARESTK---------------NHDLLPIF 385
                 + P    A+ +D NT  A+  L    R   +                  L    
Sbjct: 347 AEKVAGLLPRFREAMDDDFNTAQALGTLFDSIRTLNRLLAEGGGSSSASRADLEQLRAAV 406

Query: 386 NASAHILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LG+            E  K    +     IE L+ ER    K K F  +D IR 
Sbjct: 407 TEIGAVLGLFRIKPSDWLAAREAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDEIRD 466

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
            L S+   L D        + T WK K
Sbjct: 467 YLLSRDIQLVDT------PQGTAWKVK 487


>gi|187734096|ref|YP_001879221.1| cysteinyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|229558790|sp|B2TTB3|SYC_SHIB3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187431088|gb|ACD10362.1| cysteinyl tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|320174878|gb|EFW49998.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320186200|gb|EFW60940.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
 gi|332098469|gb|EGJ03435.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 461

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +    L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|290510194|ref|ZP_06549564.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289776910|gb|EFD84908.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 461

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +             +      +   + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           +       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDAEVAEIESLIQQRLNARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 456

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 182/476 (38%), Positives = 258/476 (54%), Gaps = 43/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LKIYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA++        ++I  +TS+      +D  RL  + P  +P+
Sbjct: 61  -VTYVRNITDIDDKIIKRAQEN------GESIQALTSRFITAMDEDAARLGVMRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M+ +I  +I  G AY A+  ++ +  SS   YG  S + +++ + G RV    
Sbjct: 114 ATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM + +LG  FDIHGGG DL FP
Sbjct: 174 YKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+HNGF+ ++  KMSKS GNF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAANGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLE-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVLS 353
           A V+R  +L   YR P++++   L +A   L++         +                +
Sbjct: 286 AEVVRFFILRAQYRSPLNYSDHHLDDARQALTRLYTALRGLALPTFTIDWQQPQAARFKA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG----------IEVCKEHLNK 403
           A+ +D NT  A   L +LA E  +   L       A                   E    
Sbjct: 346 AMDDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESAQG 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +  IE+ +Q RL   + K F+ AD IRKQL  +G +LED        + T W++
Sbjct: 406 RSADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDS------PQGTSWRR 455


>gi|260582005|ref|ZP_05849800.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094895|gb|EEW78788.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 459

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 181/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVAFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            N +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SNDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWRKQ 459


>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 469

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 185/483 (38%), Positives = 265/483 (54%), Gaps = 46/483 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K++NTL R+   F+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY  
Sbjct: 9   PNMLKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLG 68

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  +TYVRNITD+DDKII+RA +        +    +  +   +  KD   L  L P  
Sbjct: 69  YD--LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVVEMYKDFDALNILRPDF 120

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT+HIP++I ++Q +I  GHAY A+  +++FD  S  +YG  SR+ +++ + G R+ 
Sbjct: 121 EPRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIE 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG+ FDIHGGG DL
Sbjct: 181 INEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L        
Sbjct: 241 MFPHHENEIAQSCCAHG-NQYVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVLN------- 292

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAV 351
            + A  +R  +L  HYR  ++++ + L  A   L +                      A 
Sbjct: 293 HYDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDAF 352

Query: 352 LSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVC 397
             A+ +D NT +A+  L ++ARE          K + L       A ILG+      +  
Sbjct: 353 REAMDDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFL 412

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +   +++    IE L+++R      K +++AD  R  L   G ILED      G   T W
Sbjct: 413 QAGSDEDEVAKIEALIKQRNESRATKDWAAADAARNALTEMGIILED------GPNGTTW 466

Query: 458 KQK 460
           +++
Sbjct: 467 RKQ 469


>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166200150|sp|A6SZV1|SYC_JANMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 464

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 185/481 (38%), Positives = 257/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  I+P  +RMYVCG TVYD+ HIG+AR M+VFD++ R LR    E 
Sbjct: 4   LKIYNTLAREKQPFTPIEPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        ++IS +T +      +D   L    P H+PR
Sbjct: 63  -VNYVRNITDIDDKIIKRAAEN------GESISALTQRFIDAMDEDAAALGVQKPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN++PQM+ LI+ +  +G AY++ + ++ +     P YG  S + +D+ + G RV    
Sbjct: 116 ATNYVPQMLGLIEALERNGLAYKSSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK S   EP    W S WG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 176 GKRDPLDFVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+L        
Sbjct: 236 QFPHHENEIAQSEGAS-QHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLA------- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
            + + V+R  +L  HYR  ++++   L +A   L++             A          
Sbjct: 288 KYDSEVVRFFILRAHYRSQLNYSDAHLDDARNALTRMYTALKGVAPDQAALDMTEAHALR 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV----------CK 398
              A+ +D NT  A+  L +LA E  K     L       A I+G+              
Sbjct: 348 FAEAMNDDFNTPLAVAVLFELANEINKTKSPALARQLVGLAGIVGLLQRPAQQFLHAGLA 407

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +   + + ++ R+   K K F+ AD IR +L  KG ILED         +T W+
Sbjct: 408 NGEDGEMETFVVEQIEARVNAKKAKNFAEADRIRAELLEKGIILEDKPGG-----LTEWR 462

Query: 459 Q 459
           +
Sbjct: 463 R 463


>gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 508

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 189/508 (37%), Positives = 258/508 (50%), Gaps = 72/508 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIY+++      F+ +    + MYVCG TVYD+ HIG+AR M+ FDV+ R LR+  
Sbjct: 22  QATLKIYDSMTTNKRSFEPLQVGKVGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLG 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII RA +        + I  +T +      +D   L C +P  
Sbjct: 82  FD--VNYVRNITDIDDKIIARANEN------GEEIGQLTERFITAMHEDAAALGCESPDA 133

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT HI  M+ +I  +    HAY A N ++ +   +   YG  S+RK+++ + G+RV 
Sbjct: 134 EPRATQHIDDMLQMIGTLEQKEHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVD 193

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF+LWK +   EP W+S WG GRPGWHIECSAMS+  LG  FDIHGGG DL
Sbjct: 194 VDTDKKNPFDFVLWKAAKAGEPQWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDL 253

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      AN W+H GF+N++G KMSKS GNF TI E++E       
Sbjct: 254 QFPHHENEIAQSEAATGC-TYANNWMHVGFINVDGEKMSKSLGNFFTIREVME------- 305

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGII 347
            +    IR  +L +HYR  ++F+   L EA   L++  Q              + S+  I
Sbjct: 306 KFHPETIRFFILSSHYRSQVNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEATI 365

Query: 348 DPA------------VLSALYNDLNTVSAIQALHKLAREST-------------KNHDLL 382
           D A             + A+ +D NT  AI  L  LA+E               K     
Sbjct: 366 DTASIDSEIRGYSANFIKAMNDDFNTPQAISVLFSLAKEVNKLARETENDQATAKLKAAA 425

Query: 383 PIFNASAHILGI------EVCKEHL-----NKNISIAIEKLVQERLILLKMKKFSSADYI 431
                 A  L I      E  + H+      +     I+ L+QER+     K F+ AD I
Sbjct: 426 VTLKGLAGTLNIGQVKPTEFLQAHIGSVDEEQMTDEQIDTLIQERIDAKANKNFARADEI 485

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R  L+     LED K      + T W++
Sbjct: 486 RNLLQQNNIELEDSK------QGTTWRR 507


>gi|330686235|gb|EGG97847.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 466

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLIKRSKE------LNESVPEIADKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T    +YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKKLVDEGYAYESNGDVYFRTRQFKDYGKLSHQSIDDLKVGARIEAGDQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTSK 344
            V+R  M+  HYR PI++ ++ ++ A+  L +                      +     
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVSAAKSGLERIRNSYQLIEEREAIATDIDNQEEYINQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +A+ A + LA+ + +       +  ++  F       + +LG
Sbjct: 346 DQILENFEAVMDDDFNTANAVTAWYDLAKLANRYVLENVTSSKVIAQFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +     +  +   IE+L++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLKGNQQDDLLDEEIEQLIEERNEARKNKDFARADEIRDHLKEQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|168798100|ref|ZP_02823107.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|189379362|gb|EDU97778.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
          Length = 461

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L  A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKHARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|295108532|emb|CBL22485.1| cysteinyl-tRNA synthetase [Ruminococcus obeum A2-162]
          Length = 469

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 175/492 (35%), Positives = 249/492 (50%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF  ++   +RMYVCGPTVY+  HIGNARPMI+FD + R L Y   E 
Sbjct: 1   MKLFNTMSRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYLEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        +   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVSSEEISQRYIAECKKDMAGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ +I  G+AY  A+  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIDGMIDMIQTLIDKGYAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPFWKSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS C + +   A  W+HN FLN++ RKMSKS GNF T+ ++       G 
Sbjct: 233 VFPHHENEIAQSECCNGV-PFAKYWMHNAFLNIDNRKMSKSLGNFRTVRQI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------ 342
            +   V+R  ML  HYR P++F+   +  ++  L +    +                   
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMESSKNALERITDAAARLRDRQAAASVQEASEDE 344

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
                 +         A+ +D NT  A+ A+ +L +    N             L +   
Sbjct: 345 KKMMQEEAAFVTKFEEAMDDDFNTADALAAVFELVKFGNTNVQEGSSAEFAAHTLEVMTK 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LG+ + K+   + +   IE L+ ER    K K F+ AD IR  L  KG  L+D + 
Sbjct: 405 LCDVLGLILDKKE--EILDEEIENLIAERQAARKAKDFARADEIRGLLLDKGIELKDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|152979432|ref|YP_001345061.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|187629819|sp|A6VQ79|SYC_ACTSZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150841155|gb|ABR75126.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 459

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 183/479 (38%), Positives = 256/479 (53%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I+ + + MYVCG TVYD  H G+ R  + FDV+ R LR+     
Sbjct: 2   LKIFNTLTREKEEFKPINQNQVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRFLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVERMIAEMHKDFDALNILRPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I ++  ++  GHAY  A+ +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVDALLQRGHAYLAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S  LG  FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   E   N W+H G L +   KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILT-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
           A  +R   L   YR  +D++ + +  A   L +               ++     A   A
Sbjct: 286 AESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNSELPAQDQYVGAFKDA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKEH 400
           + +D NT  A+  L +LARE  K         + L       A +LG+         +  
Sbjct: 346 MDDDFNTPGALAVLFELAREINKLKAENPAQANHLAARLKHLAGVLGLLEQDPEAFLQGG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                   IE L+++R      K +++AD  R  L+  G +LED      G   T W++
Sbjct: 406 AENEEVGKIEALIKQRNDARAEKNWAAADAARDALKEMGVVLED------GANGTSWRK 458


>gi|260887698|ref|ZP_05898961.1| cysteine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838629|ref|YP_004413209.1| cysteinyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862578|gb|EEX77078.1| cysteine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746393|gb|AEB99749.1| cysteinyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 476

 Score =  569 bits (1466), Expect = e-160,   Method: Composition-based stats.
 Identities = 166/495 (33%), Positives = 251/495 (50%), Gaps = 61/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+  EF+ ++P    +Y CG T Y+  HIGNARP + +DV+ R L       
Sbjct: 2   LRVYNTLTREKEEFKPLEPGKASIYCCGVTPYNDPHIGNARPFVTWDVVRRYLEKKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII RA++        +    +      ++ K    L        PR
Sbjct: 60  AVHYVQNFTDIDDKIIRRAKE------AGETWKELADHYIAEYFKAIDALNVRRADAYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HI  ++ +I+ +I  G+AY  + ++ +       YG  S R +D+ + G RV     
Sbjct: 114 VSEHIADVLAVIEKLIEKGYAYALDGDVYYSVERFAGYGKLSGRSLDDMQAGARVGVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK + P EP W+SPWG+GRPGWHIECS MS  YLG+ FD HGGG DLIFPH
Sbjct: 174 KHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSMKYLGETFDFHGGGSDLIFPH 233

Query: 245 HENEIAQSCCADR-IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENEIAQ+          A  W+HNGF+ +   KMSKS  NF T+ ++LE        + 
Sbjct: 234 HENEIAQAQACTGDDHSFARYWLHNGFITIHDEKMSKSKNNFFTVKDILE-------KYA 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
             V+R  ++ THYR P+DFT +RL EA+  L++   +  +   +                
Sbjct: 287 GEVVRFFIVQTHYRSPLDFTDERLVEAKTSLARLKNSWDNAAELSSRKDESSGSAKSLLA 346

Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFN 386
                  A   A+ +D NT  AI  L  L++E    ++                +  ++ 
Sbjct: 347 AAMEAKAAFYEAMDDDFNTALAISHLFSLSKEINIYYNEVTTGAAAFDAANFAKVRAVYA 406

Query: 387 ASAHILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             A ++GI   KE    +  +   +E L+  R    + K ++ AD++R +L+++G ++ED
Sbjct: 407 EMAEVIGIFEAKEEKAADGLVDSLMELLLNLRQKAREEKNWALADHLRDELKARGVVIED 466

Query: 445 YKNPDNGQRMTRWKQ 459
                   +  RWK+
Sbjct: 467 T------PQGARWKR 475


>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 482

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 169/500 (33%), Positives = 248/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++   
Sbjct: 2   REITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  +  E        A  +I ++    + +    L        
Sbjct: 62  K--VTYVQNFTDVDDKIINTSNGE------GVAWDVIANRYIDSYFEVMDALGVERADVY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP ++ +I+ +I  G+AYE + ++ F      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+ FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
               +R  +L THYR P+DF+ +RL EA   L +                       +  
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAGPCDDAQRLL 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
                 +    +A+ +D NT  A  ++  LA+E    +                ++  IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRIF 406

Query: 386 NASAHILG-IEVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G +E   E      +   E+L+      R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED           RWK++
Sbjct: 467 TIEDSPT------GARWKKR 480


>gi|283769685|ref|ZP_06342577.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283459832|gb|EFC06922.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 471

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 262/483 (54%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   
Sbjct: 5   KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  
Sbjct: 65  N--VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+   
Sbjct: 117 PRVMDHMEDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGILSHQSIDDLKVGARIDAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------T 342
              V+R  M+  HYR PI++ ++ +  A   L +   +                      
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHI 391
               I     + + +D NT +AI A + LA+ + K       + +++  F A     + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+ +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468

Query: 452 QRM 454
           +R 
Sbjct: 469 KRG 471


>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|187629847|sp|A1U1Q7|SYC_MARAV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 463

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 262/482 (54%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL ++   F+ ++P  +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR+   + 
Sbjct: 1   MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI+ RA +        +  + +T +  +   +D  +L  L+P  +PR
Sbjct: 60  -VHYVRNITDIDDKILRRADEN------GEVYTDLTDRMIRAMHEDEAKLGVLSPNEEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  +I +IQ +I  GHAY A+  ++ F   S P+YG  S++K+++   G RV  + 
Sbjct: 113 ATAFIDDIIAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF LWK + P E  W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 173 AKRSPADFALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       + W+H G + +   KMSKS GNF TI E+LE        +P
Sbjct: 233 HHENEIAQSECATG-HTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILE-------KYP 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLS 353
           A V+R  ++ +HYR  +D++   L EA   L+K            +   ++   D     
Sbjct: 285 AEVVRYFLVSSHYRSQVDYSEDNLAEAGRTLTKLYHALRGIVPAKEADVAETDHDRRFAE 344

Query: 354 ALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHL--- 401
            + +D NT  AI  LH +A +                  +      +LG+          
Sbjct: 345 VMDDDFNTAGAIAVLHAVANDINHYRREGDEEAAKRSAAVLVRLGAVLGLLQQNPEAFFQ 404

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               ++  +  IE ++Q R    K K F+ AD IR  L  KG IL+D +        T W
Sbjct: 405 ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSR------EGTTW 458

Query: 458 KQ 459
           ++
Sbjct: 459 RR 460


>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 475

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 188/490 (38%), Positives = 256/490 (52%), Gaps = 58/490 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F  IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR       +
Sbjct: 6   IYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA +        + I  +T++  Q   +D   L  L P  +P+AT
Sbjct: 64  TYVRNITDIDDKIIARAAEN------GETIGELTARFIQAMHEDANALGVLRPDIEPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +IPQMI +I+ +I +  AY A N ++ +       YG  S + +D+ + G RV     K
Sbjct: 118 ENIPQMIAMIETLIQNSKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 177

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF+LWK +   EP WESPWG GRPGWHIECSAMS + LG  FDIHGGG DL FPHH
Sbjct: 178 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGADLQFPHH 237

Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           ENEIAQS  A                        W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 238 ENEIAQSVGASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           +L       + +   V+R  +L  HYR P++++   L +A+  L++   T          
Sbjct: 298 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAFD 350

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---- 393
            S +         +A+ +D  TV A+  L +LA E  K +D  L     A   I+G    
Sbjct: 351 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 410

Query: 394 --IEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             IE  +     +   +  I+ L+  R      K +  +D IR  L     ILED     
Sbjct: 411 DPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWVESDRIRDLLNEHKIILEDN---- 466

Query: 450 NGQRMTRWKQ 459
                T W++
Sbjct: 467 --AGGTTWRR 474


>gi|228475261|ref|ZP_04059986.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270726|gb|EEK12135.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 466

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEAFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  +  + F +D   L     T  PR
Sbjct: 60  TVDYVSNFTDVDDKLINRSKE------LNESVPEIADRYIKAFYEDVGALNVKRATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIEFIKQLVDDGYAYESNGDVYFRTRQFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G+GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGIIDP- 349
            V+R  M+  HYR PI++ ++ +  A+  L +   +               T    ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                   + + +D NT +A+ A + L++ + K                 ++   + +LG
Sbjct: 346 NDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTQVIQRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDTLKEQNIILEDTPQGVRFRR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082069|sp|A6VX53|SYC_MARMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 460

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 176/480 (36%), Positives = 255/480 (53%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K   F+ I+   + MYVCG TVYDF HIG+AR MI FDV+ R +R+   E 
Sbjct: 2   LKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       N++   +T +      +D  RL    P  +P+
Sbjct: 61  -LNYVRNITDVDDKIIKRAEEN------NESTQSLTERMIAAQREDELRLGNKMPDREPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I ++Q +I  G AY+  + ++ +  +   +YG  + RK+++   G R+  + 
Sbjct: 114 ATEFMQEIIDMVQVLIDKGFAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGARIDVEV 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF+LWK++   E  W SPWG GRPGWHIECSAMS++ LG  FDIHGGG DL FP
Sbjct: 174 AKEHPADFVLWKQAKAGEVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N W+H G + +   KMSKS GNF T+ ++L         + 
Sbjct: 234 HHENEIAQSEAATGKE-YVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLA-------KFN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             V+R  M+ + YR  ID++ Q L EA++ L +       + + +             A+
Sbjct: 286 PEVVRYLMVSSQYRSAIDYSDQSLLEAKVALERLYTALRQQQVAESFEPTVFTERFEEAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH------- 400
            +D NT  A+  L +L RE  K           L     + A +LG+             
Sbjct: 346 KDDFNTAVAVSVLFELVRELNKAKTEDANKASLLAAELRSLAELLGLLYQDPEYFLQNST 405

Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  +AI+ L+ ER    K K F+ +D IR +L S+G  L D +        T W +
Sbjct: 406 VSEGLGEVAIQALIDERTQARKDKNFARSDEIRDELASQGIELLDSR------EGTTWTR 459


>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 483

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 188/504 (37%), Positives = 254/504 (50%), Gaps = 68/504 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNT  R+  EF  ++P  +R+YVCG TVYD  HIG+AR  + FD + R   +   
Sbjct: 1   MPLVVYNTQSRRKEEFIPLEPGVVRVYVCGVTVYDDPHIGHARCYVAFDAMVRH--FLAK 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YVRN TDIDDKII RA +             +  K  + F +D   L  L P+H+
Sbjct: 59  GWRVNYVRNFTDIDDKIIRRAAESGLGW------RELADKYIESFRQDMAALDVLPPSHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI +MI  IQ ++  GHAY+    +++F   S   YG  SRR +++ + G RV  
Sbjct: 113 PRATEHIAEMIATIQTLMAKGHAYQIEGGDVLFAVESFDGYGKLSRRNLEDMQAGARVEV 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF+LWK S P EP W+SP G GRPGWHIEC+AMS  YLG+ FDIHGGG DL+
Sbjct: 173 DPRKKNPMDFVLWKASKPGEPSWDSPLGPGRPGWHIECTAMSGKYLGQTFDIHGGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ          A+ W+HNGF+ +   KMSKS GNF TI ++L+  +     
Sbjct: 233 FPHHENEIAQGEACTG-HPLAHYWLHNGFVRVNHEKMSKSLGNFFTIKDILKITR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIIDPA----- 350
                +RL +L  HYR P+DF+   + EA   L +        Q   + G +D A     
Sbjct: 287 --PEALRLFLLSKHYRSPLDFSDAAIKEAGAGLERLYTALQAAQERAAAGPLDAAGQALA 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPI----FNAS 388
                      + + +D NT  AI AL  LAR   K            LL +        
Sbjct: 345 AEIQALADEFEAGMDDDFNTARAIGALFGLARLGNKLAAEPDGPAKGPLLELCARRLREL 404

Query: 389 AHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              LG+      E  +    +        +  IE L+ +R    K K F+ AD IR QL+
Sbjct: 405 GGRLGLLRIDPAEFFRGAAGQTATQGGVGAADIEALIAQRNQARKDKNFAEADRIRDQLK 464

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
           + G  L+D        + T W+ +
Sbjct: 465 AMGVTLQDS------PQGTTWRME 482


>gi|41203|emb|CAA39691.1| cysteine-tRNA ligase [Escherichia coli K-12]
          Length = 461

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVAMVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   + +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAAVERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|320538832|ref|ZP_08038508.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030992|gb|EFW12995.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 461

 Score =  568 bits (1465), Expect = e-160,   Method: Composition-based stats.
 Identities = 173/482 (35%), Positives = 247/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ ID   + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIDAGKVGMYVCGVTLYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TDIDDKII R+ +        +    +T +   +   D   L    P  +PR
Sbjct: 60  SLNYVRNVTDIDDKIIRRSAENA------ETCDQLTERMLAEMHADFDSLLIERPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I + Q +I   HAY A N +++F   S P YG  S + +++ + G RV    
Sbjct: 114 ATQHIAEIIAITQRLIDRNHAYVASNGDVMFSIDSDPQYGLLSHQALEQLQAGARVEIDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKHNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGPHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSSCAHDGR-YVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGADADAQPMGGDAFEARFRQA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L +LARE  +  +        +       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFELAREVNRLKNEDRVAANGMAATLRKLAKVLGLLQQQPEQLLQNG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +N      IE L+++R    + K ++ AD  R +L     +LED        + T W+
Sbjct: 406 AQVNGGEGAEIEALIKQRNEARETKNWALADVARDRLNEMNIVLED------APQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|162139463|ref|YP_001172566.2| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|187631654|sp|A4VL73|SYC_PSEU5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 187/478 (39%), Positives = 259/478 (54%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+   + 
Sbjct: 3   LAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        +    +  +      +D TRL  L P  +PR
Sbjct: 62  -VTYVRNITDIDDKIIRRASEN------GEPFQALVERMIAAMHEDETRLNVLRPDVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G AY   N ++ +       YG  SRRKI++ K+G R+    
Sbjct: 115 ATDHIAGMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 175 AKEDPLDFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 235 HHENEIAQSEAATG-KLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR PI+++   L EA+  L ++           PA          +A+
Sbjct: 287 PEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAGGDEFVARFAAAM 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-------EH 400
            +D N+  A   L ++ RE  +  +        L       A +LG+   +         
Sbjct: 347 DDDFNSPEACAVLFEMIREVNRLREADLAAAAALAARLKVLAGVLGVLQLEPDAFLQAGA 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+  RL     K +  +D IR QL + G +LED K        T W+
Sbjct: 407 AGKVDAAEVEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGK------GGTTWR 458


>gi|188590724|ref|YP_001919652.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|251778988|ref|ZP_04821908.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|229558624|sp|B2UY90|SYC_CLOBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188501005|gb|ACD54141.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|243083303|gb|EES49193.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 470

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 166/492 (33%), Positives = 251/492 (51%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  EF  I P  ++MYVCGPTVY+F HIGN R  IVFD + R L Y   + 
Sbjct: 1   MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +  I  K  +++ +D  +L     T  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKKANEE------GTTVKEIGDKYIKEYYEDADKLQIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---- 180
           AT +I  +I  +  +I  G+AYE   ++ F+T    +YG  S + I++ +MG        
Sbjct: 113 ATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSV 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK+P DF +WK   P EP W+ PWG GRPGWHIECS M+   LG   DIH GG+DL
Sbjct: 173 ADERKKDPMDFAIWKSQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE+AQS     + + AN W+H+ ++N+  +KMSKS  NF T  ++L       +
Sbjct: 233 TFPHHENEVAQSEALTGV-QFANYWMHSAYVNINNQKMSKSLNNFFTARDIL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
            + + V+R  M+  HYR  I+F+   L  A+  + +      +   +   V         
Sbjct: 285 EYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLIDEVSRENMNEEE 344

Query: 352 --------------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
                         +  + +D NT  A+  L +L +++  N          +  L +   
Sbjct: 345 VRYLNSLNKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINVNSSKELVNKALDLIRE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               LG+   ++    ++   IE L+Q+R    K K F+ +D IR  L+ +G +LED   
Sbjct: 405 LGAPLGL--LQKITKGSLEDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                +  RWK+
Sbjct: 461 ----PQGVRWKK 468


>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|21264018|sp|Q97ED6|SYC_CLOAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 464

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 168/484 (34%), Positives = 251/484 (51%), Gaps = 54/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ RK  EF  + P+ ++MYVCGPTVY+F HIGNAR  IVFD + +   Y   + 
Sbjct: 1   MKIYNTMTRKKEEFVPVKPNEVQMYVCGPTVYNFFHIGNARTFIVFDTVRKYFEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I +A  E        ++  +  +  +++ +D   L     T  PR
Sbjct: 60  -VNFIQNFTDIDDKMIAKANNE------GVSVKELGDRYIKEYYEDADGLNLERATCNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  ++ +   G+AYE + ++ F+T++   YG  S + ++++  G  +     
Sbjct: 113 ATEYIGKIIDFVKGLQDEGYAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATIAVDDR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+PADF LWK   P EP WESPWG+GRPGWHIECS M+   LG   DIH G +DLIFPH
Sbjct: 173 KKSPADFALWKSEKPGEPSWESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAIDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  +  W+H  +LN+   KMSKS  NF+T  ++L       + + A
Sbjct: 233 HENEIAQSEARTG-KPFSKYWMHAAYLNINNEKMSKSLNNFLTARDIL-------KEYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
            VIRL +L  HYR P++FT + +  A+  L +   T  + G +                 
Sbjct: 285 EVIRLFLLSAHYRTPLNFTEESIEAAKTSLERLYNTINNLGSLLNNTAESNDDSEYLKAL 344

Query: 348 ---DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGI 394
                  +  + +D NT   I  +  LA++   N             + +       LGI
Sbjct: 345 DSYREKFIEKMDDDFNTADGISVIFDLAKDINININGKSSKAAVEKAISLMRELGKPLGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E  N  +   I+ L+++R    K K ++ AD IR  L+ +G +LED          
Sbjct: 405 LQKVEKHN--LEDEIQNLIEQRQNARKNKDWALADKIRDDLKERGIVLEDT------PEG 456

Query: 455 TRWK 458
            RWK
Sbjct: 457 IRWK 460


>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 482

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 168/500 (33%), Positives = 242/500 (48%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++   
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  +  E        +   I ++    + +    L        
Sbjct: 62  K--VTYVQNFTDVDDKIINTSNGE------GVSWDTIANRYIDSYFEVMDALGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +I  +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS            W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
               +R  +L THYR P+DF+ +RL EA   L +                       +  
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQRLL 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
                 +    +A+ +D NT  A  ++  LA+E    +                ++  IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTGREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILGIEVCKEHLNKNI-SIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++GI       N    +   E+L+Q     R      K++  AD IR +L   G 
Sbjct: 407 KFMTEVIGILEKAWEGNTGANAAEYEELMQVILSVRQACRDQKQWGLADCIRDRLSEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED        +  RWK++
Sbjct: 467 TIEDS------PQGARWKKR 480


>gi|145635477|ref|ZP_01791177.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145267242|gb|EDK07246.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 459

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 261/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWRKQ 459


>gi|291522471|emb|CBK80764.1| cysteinyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 466

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 182/483 (37%), Positives = 256/483 (53%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ++   +RMYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLTRRKDEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E          S+I+ +  ++  KD   +     TH P+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE------GVDASVISERFIKEAQKDMADMNVKEATHHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +IQ ++  GHAY  +  + F T S  +YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIDGMIDMIQTLVNKGHAYAVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVNG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     EP W SPWG GRPGWHIECS MS  YLG+  DIH GG DLI
Sbjct: 173 EEGKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  E  A+ W+HNGFLN+   KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEACNDKE-FAHYWMHNGFLNINNVKMSKSLGNFFTVREIAE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
           +   V+R  ML  HYR P++F+ + +  +   L +                         
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEASRNGLERILTAIDRLRTLNLQGDTCTAEENEQ 344

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
                 +     +A+ +D NT  AI A+ ++ + +  +            +L        
Sbjct: 345 MKVFDALVAKYEAAMEDDFNTADAISAIFEMVKAANIHVTETSTAAFRDQILSEIVRLCD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI+  K+   + +   I+ L+ ER    K K F+ AD IR +L +KG IL+D +    
Sbjct: 405 VLGIKTEKKE--ELLDDEIQALIDERQAARKAKNFARADEIRDELLAKGIILKDTREGVK 462

Query: 451 GQR 453
             R
Sbjct: 463 WSR 465


>gi|209527155|ref|ZP_03275668.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209492404|gb|EDZ92746.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 486

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 177/504 (35%), Positives = 252/504 (50%), Gaps = 69/504 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  ++P  ++MY CG TVYD+ H+G+AR    +DV+ R L +   E 
Sbjct: 3   LKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA+++         +  ++ +    + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRAKEQ------ESTMEAVSQRFIDAYFEDLRRLNVRDAKAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
            T+HI ++  LI+ +   GHAY  + ++ ++    P+YG  SRR++++ +MG        
Sbjct: 115 VTDHIKEIHQLIEQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVA 174

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELL+     
Sbjct: 235 DLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------- 337
            R     V+RL +L  HYR+P+DFT + +  A+                           
Sbjct: 289 -RPVDPMVVRLFILQGHYRKPLDFTDEAIASAKNGWETLKDGLLFAEQYGARLGWSADSS 347

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
           P    +          A+ +D NT   +  L +LA+E  +  +LL               
Sbjct: 348 PSKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTPSDRIYA 407

Query: 384 ---IFNASAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   A + G+E   +              IE LV++R    K K ++  D IR QL
Sbjct: 408 TWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRDQL 467

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           ++ G  L D    +     T W++
Sbjct: 468 QANGVTLIDRPGGE-----TLWRR 486


>gi|331090783|ref|ZP_08339630.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330399891|gb|EGG79550.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 468

 Score =  568 bits (1464), Expect = e-160,   Method: Composition-based stats.
 Identities = 180/491 (36%), Positives = 250/491 (50%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  ++   ++MYVCGPTVY+  HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKVYNTLTRRKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII++A +E        + + I+ +   +  KD   +     T  P 
Sbjct: 60  -VNFVSNFTDVDDKIIKKAIEE------GVSANEISQRYIAECKKDMEGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I ++I  G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMIEMISDLIDKGYAYEKNGTVYFRTRKFEEYGKLSHKNLDDLQSGGRSLLVTG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++  DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL+
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWCDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HN FLN++  KMSKS GNF T+ E+       G  
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWLHNAFLNIDNHKMSKSLGNFRTVREI-------GEK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
           +   V+R  ML  HYR P++F+   +  +   L +                         
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAALMESSANGLERILTAVANLKHLLGVVSEENMTAEER 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
           +          A   A+ +D NT  AI ++  L + +               L  +    
Sbjct: 345 EQVKETENFVRAYEEAMEDDFNTADAIASIFDLVKFANTTTSAQSSKEYLQTLYDLIVKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           + +LG+ V KE   + ++  IE L++ER    K + F  AD IR +L  KG ILED +  
Sbjct: 405 SDVLGLIVEKEE--EMLAEDIEALIEERQAARKERNFQRADEIRDELLKKGIILEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKK 467


>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 482

 Score =  567 bits (1463), Expect = e-160,   Method: Composition-based stats.
 Identities = 169/500 (33%), Positives = 248/500 (49%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++   
Sbjct: 2   REITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  +  E        A  +I ++    + +    L        
Sbjct: 62  K--VTYVQNFTDVDDKIINTSNGE------GVAWDVIANRYIDSYFEVMDALGVERADVY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP ++ +I+ +I  G+AYE + ++ F      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+ FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS        +   W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
               +R  +L THYR P+DF+ +RL EA   L +                       +  
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAGPCDDAQRLL 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
                 +    +A+ +D NT  A  ++  LA+E    +                ++  IF
Sbjct: 347 EKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRIF 406

Query: 386 NASAHILG-IEVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G +E   E      +   E+L+      R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED           RWK++
Sbjct: 467 TIEDS------PAGARWKKR 480


>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 482

 Score =  567 bits (1463), Expect = e-160,   Method: Composition-based stats.
 Identities = 168/500 (33%), Positives = 244/500 (48%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++I +YNT+ R+   F  + P   +MYVCG T Y+  HIGNARP + +DV+ R +++   
Sbjct: 2   REITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKII  +  E        +   I ++    + +    L        
Sbjct: 62  K--VTYVQNFTDVDDKIINTSNGE------GVSWDTIANRYIDSYFEVMDVLGVQRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  +I +IQ +I  G+AYE + ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNP DF LWK +   EP WESPWG GRPGWHIECSAMS  YLG  FD HGGG DLIF
Sbjct: 174 GRKKNPMDFALWKAAKHGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS            W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------QY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
               +R  +L THYR P+DF+ +RL EA   L +                       +  
Sbjct: 287 SPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRLL 346

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
                 +     A+ +D NT  A  ++  LA+E    +                ++  IF
Sbjct: 347 EKAKAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRIF 406

Query: 386 NASAHILG-IEVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGF 440
                ++G +E   E      +   E+L+Q     R    + K+++ AD IR +L   G 
Sbjct: 407 KFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIGI 466

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED        +  RWK++
Sbjct: 467 TIEDS------PQGARWKKR 480


>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|171460796|sp|A0LIR9|SYC_SYNFM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 493

 Score =  567 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 188/511 (36%), Positives = 256/511 (50%), Gaps = 79/511 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL +   EF  ++P  ++ YVCG TVYD +HIG+AR  IVFDV+YR LR+   E 
Sbjct: 3   LHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGFE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKII RA               I  +    F +D   L  L P  +P 
Sbjct: 62  -VTYVRNFTDVDDKIIRRAND------AGTDCRSIAQRYIAAFYEDMDALGVLRPDLEPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++P MI +I+ ++  G AY+A  ++ F+    P YG  S R+I++   G RV     
Sbjct: 115 ATENVPGMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVDAR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM S +LGK FDIHGGG DLIFPH
Sbjct: 175 KRNPLDFVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A  +      W+HNGF+N+   KMSKS GNF+TI ++L       +    
Sbjct: 235 HENEIAQSEAAFGM-PFVRYWLHNGFVNINNEKMSKSLGNFLTIRDVL-------QKVHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
             +R  +L  HYR P+DF+ + + EAE  L +   T  +                     
Sbjct: 287 ETVRFFVLSKHYRSPVDFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQEKALRGQ 346

Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
                     +  A   A+ ND NT  A+  L  L R   +  D             +  
Sbjct: 347 DPELFDQIAALSGAFREAMDNDFNTAQALGNLFSLQRHLQRFLDKFGRKQLKGPASALAR 406

Query: 387 ASAH-------ILGIEVCKEHLNKNI------------SIAIEKLVQERLILLKMKKFSS 427
           A A        +LG+   +    +                 +E+ ++ R    + K F+ 
Sbjct: 407 AGADAIRDHALVLGLLTREPEAFQAEQRSLKIKSTGLTEAEVERCIELRRQARQDKNFAE 466

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           AD +R+++E KG  LED          TRW+
Sbjct: 467 ADRLREEIEKKGIQLEDS------PAGTRWR 491


>gi|331003582|ref|ZP_08327079.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330412423|gb|EGG91814.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 469

 Score =  567 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 182/490 (37%), Positives = 256/490 (52%), Gaps = 57/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL RK  EF  I+   ++MYVCGPTVY+  HIGNARPMI FD + R   Y   + 
Sbjct: 1   MKIFNTLSRKKEEFVPIEEGKVKMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E          S+I+++   +  KD   +  L  T  P 
Sbjct: 60  -VNYVSNFTDVDDKIINKAIEEGVEA------SVISTRYIDECKKDMEAMNVLPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M  +I ++I  GHAY A +  + F   S  +YG  S + IDE + G R   V 
Sbjct: 113 ATEEIDGMEEMIGSLIEKGHAYVAKDGTVYFRVKSFEDYGKLSHKNIDELQSGFREIKVK 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++  DF+LWK     EP W+SPW +GRPGWHIECS MS  YLG   DIHGGG DL
Sbjct: 173 GEEDKEDSNDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  AN W+HN FLN++ +KMSKS GNF T+ ++ E       
Sbjct: 233 IFPHHENEIAQSESASG-KSFANYWMHNAFLNIDNKKMSKSLGNFFTVRDISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPA 350
            +   V+R  ML  HYR P++F+ + +  ++  L +            + + +  I D  
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEASKNSLERILTGVENIKDVQKRNNADAITDAE 344

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--- 394
                         + A+ +D NT  AI A+ +L + S  + +       +  +L I   
Sbjct: 345 LSNLEIAKVLKDKFVIAMDDDFNTADAITAIFELIKLSNTSLNEKSTVEYANGLLNIILP 404

Query: 395 -----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                 +  E   + +   IE L+++R    K K F+ AD IR +L   G +LED +   
Sbjct: 405 LCDTLGIITERKVEILDSEIEDLIEQRTSARKNKDFALADKIRNELLEMGIVLEDTR--- 461

Query: 450 NGQRMTRWKQ 459
                 +WK+
Sbjct: 462 ---EGVKWKR 468


>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 467

 Score =  567 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 186/486 (38%), Positives = 253/486 (52%), Gaps = 57/486 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN L R+   F   +P  +R YVCGPTVYDF HIGNARP IVFDVL R L +      V
Sbjct: 5   VYNDLTRRKEVFVPQNPGEVRFYVCGPTVYDFFHIGNARPFIVFDVLRRYLEHQGY--TV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYV+N TD+DDK+I RA +      +  ++  +  +    + +D   L     T  PRAT
Sbjct: 63  TYVQNFTDVDDKMIRRAAE------LGISVPELAERFIAAYFEDADALGVRRATVHPRAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             IP ++ LIQ I+  GHAY    ++ FD  S P YG  S++ ++E + G RV     K+
Sbjct: 117 EEIPAILELIQAILDRGHAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARVEVDPRKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF LWK   P EP W+SPWG GRPGWH+ECSAMS  +LG+  D HGGG DLIFPHHE
Sbjct: 177 HPLDFALWKAQKPGEPAWKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCDLIFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS  A   +     W+HNG+L ++  KMSKS GNF+T  E         + +P   
Sbjct: 237 NEIAQSEAATG-KPFVRYWVHNGYLMIDKEKMSKSLGNFLTAREAR-------KRFPPLA 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------------- 347
           IRL ML  HYR PI+F+ + L +A     +     T                        
Sbjct: 289 IRLFMLSAHYRSPINFSEEGLMQATAAQERLRNGWTELEFALGHRSASAEPDGALRRMLR 348

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPI------FNASAHILG 393
                 L+AL +DLNT  AI  +  + +          + DL  +      F     ILG
Sbjct: 349 EGRERFLAALDDDLNTAGAIGVVFDVVKGVNSSLGERPDADLEALGQAKTFFLEVEDILG 408

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           I        +++   +++L+QER    K + F+ AD IR +L ++G +LED        +
Sbjct: 409 ILGVAPE--ESLEEDVDRLIQERQAARKGRDFARADAIRDELLARGILLEDT------PQ 460

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 461 GPRWKR 466


>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 467

 Score =  567 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 171/488 (35%), Positives = 249/488 (51%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN L R    F  +    +  Y CGPTVYD+ HIGNARP IVFDVL R L Y   + 
Sbjct: 3   LSLYNDLTRNKELFVPLADGKVSFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEYKGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I+RA ++         ++ +  K    + +D   L     ++ PR
Sbjct: 62  -VTFVQNFTDIDDKMIDRANRD------GITVAQLAEKTIADYYEDADALGIKRASYNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++PQ+I L+Q +I  GHAY     + FD  S P YG  S++ +DE   G R+     
Sbjct: 115 ATEYMPQIIQLVQKLIDRGHAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARIEVDDA 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK   P EP W+SPWG+GRPGWHIECS MS+  LG   DIH GG+DL FPH
Sbjct: 175 KKCPLDFVLWKPQKPGEPAWDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVDLTFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A   +   N W+HN ++ ++  KMSKS GNF+T  E         + +  
Sbjct: 235 HENEIAQAEAATG-KPFVNFWLHNEYILIDKEKMSKSLGNFLTAREAR-------KHYSP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------------TSTSK 344
             IR  ML  HYR P++F+ + L +A  ++ +                        S + 
Sbjct: 287 LAIRAFMLSAHYRSPVNFSPEGLEQAGAMVERLRNCWSDLQFAKSRRDLSYDDASLSEAV 346

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHIL 392
                    A+ +D NT  A+ A+ ++ +    +             D    F     ++
Sbjct: 347 RQGREDFEEAMDDDFNTAGALGAVFEVVKAVNTHLKSSGALSGKGLDDAEKFFRDIEEVM 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+       +      I+ LV++R    K K F+ +D +R +L ++G +LED        
Sbjct: 407 GLLGLSHETDG--DAEIDALVEQRNAARKAKNFAESDRLRDELAARGIVLEDT------P 458

Query: 453 RMTRWKQK 460
           + T+WK+K
Sbjct: 459 QGTKWKRK 466


>gi|239636927|ref|ZP_04677925.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239597475|gb|EEQ79974.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 466

 Score =  567 bits (1463), Expect = e-159,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 262/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VVYVSNFTDVDDKLIKRSKE------LNESVPEIADKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T    +YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKKLVDEGYAYESNGDVYFRTRQFKDYGKLSHQSIDDLKVGARIEAGDQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTSK 344
            V+R  M+  HYR PI++ ++ ++ A+  L +                      +     
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVSAAKSGLERIRNSYQLIEEREAIATDIDNQEEYINQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +A+ A + LA+ + +       + +++  F       + +LG
Sbjct: 346 DQILENFETVMDDDFNTANAVTAWYDLAKLANRYVLENVTSTNVIAKFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +     +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLKGNQQDDLLDEEIEKLIEERNEARKNKDFARADEIRDHLKEQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|24111894|ref|NP_706404.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30062010|ref|NP_836181.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|61216306|sp|Q83M27|SYC_SHIFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24050695|gb|AAN42111.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|30040254|gb|AAP15987.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|313646855|gb|EFS11312.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|332761515|gb|EGJ91797.1| cysteinyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332768439|gb|EGJ98623.1| cysteinyl-tRNA synthetase [Shigella flexneri 2930-71]
          Length = 461

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+N  DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNRMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|187932481|ref|YP_001884454.1| cysteinyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
 gi|229558625|sp|B2TIF6|SYC_CLOBB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187720634|gb|ACD21855.1| cysteine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
          Length = 470

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 166/492 (33%), Positives = 249/492 (50%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  EF  I P  ++MYVCGPTVY+F HIGN R  IVFD + R L Y   E 
Sbjct: 1   MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I++A +E         +  I  K  +++ +D  +L     T  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKKANEE------GTTVKEIGDKYIKEYYEDADKLQIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---- 180
           AT +I  +I  +  +I  G+AYE   ++ F+T    +YG  S + I++ +MG        
Sbjct: 113 ATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSI 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K +P DF +WK   P EP W+ PWG GRPGWHIECS M+   LG   DIH GG+DL
Sbjct: 173 ADERKNDPMDFAIWKAQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE+AQS     +   AN W+H+ ++N+  +KMSKS  NF T  ++L       +
Sbjct: 233 TFPHHENEVAQSEALTGMR-FANYWMHSAYVNINNQKMSKSLNNFFTARDIL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------- 351
            + + V+R  M+  HYR  I+F+   L  A+  + +      +   +   V         
Sbjct: 285 EYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLIDEVSRENISEEE 344

Query: 352 --------------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
                         +  + +D NT  A+  L +L +++  N          +  L +   
Sbjct: 345 VNYLNSLKKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINVNSSKELVNKALNLIRE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               LG+   ++    ++   IE L+Q+R    K K F+ +D IR  L+ +G +LED   
Sbjct: 405 LGAPLGL--LQKITKGSLEDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                +  RWK+
Sbjct: 461 ----PQGVRWKK 468


>gi|323490593|ref|ZP_08095798.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323395685|gb|EGA88526.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 467

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 171/489 (34%), Positives = 258/489 (52%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+N+L R+  EF  ++   ++MYVCGPTVY++ HIGNARP+IV+D + R L+Y   
Sbjct: 1   MSIQIFNSLSRQKEEFIPLEEGKVKMYVCGPTVYNYIHIGNARPVIVYDTVRRHLQYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      +   +  I  +    + ++T  L C      
Sbjct: 61  D--VKYVSNFTDVDDKLIKAANE------LGQEVPEIAERFIAAYFENTKALGCAEADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  T+H+ Q+I  I  +I  G+AYE+  ++ + T     YG  S + +DE K+G RV   
Sbjct: 113 PLVTDHMAQIIEFIVALIEKGYAYESQGDVYYRTRKFDGYGKLSHQSVDELKIGARVETG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF+LWK + P E  W+SPWG+GRPGWHIECS M+  +LG   DIH GG DL F
Sbjct: 173 DKKEDELDFVLWKAAKPKEISWDSPWGKGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A+ W+HNG++N++  KMSKS  NF+ +N++L       +  
Sbjct: 233 PHHENEIAQSEAFTG-KPFAHYWMHNGYINIDNEKMSKSLNNFVLVNDIL-------KEL 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI+++ Q + +A   L +      +                   
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSQQLVEDAVAGLERLRTAYANLKHRLSASADLGDHSDTWV 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                I  A +  + +D NT +AI +L  L+R S                 + +F+  A 
Sbjct: 345 HKIEEIKTAFIETMDDDFNTANAISSLFDLSRLSNTYLLEKQTATSVLETFIAVFDELAG 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+   ++   + +   +E L+ ER+   K + F+ AD IR   + K  ILED      
Sbjct: 405 ILGLPFNQQE--ELLDEEVEALMAERIEARKNRDFARADEIRDLFKEKNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -AQGTRWKR 465


>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 500

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/522 (34%), Positives = 258/522 (49%), Gaps = 87/522 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+  EF    P  + MYVCGPT Y+F H+GNARP++ FD + R L Y   + 
Sbjct: 1   MLLYNTLSRQKEEFVPAIPGRVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYLIYKGYQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII+RA +E          S +  K T+++  D T L  +     P+
Sbjct: 60  -VLYVQNFTDIDDKIIKRAAEEKL------DPSALAFKYTEEYYIDATSLNVMMADIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++H+ ++I L++ ++  G AY+++ ++ F+     +YG  S R +++   G RV     
Sbjct: 113 VSDHMAEIIELVEKLVQKGFAYQSDGDVYFEVRRFKDYGKLSGRALEDMLAGARVEVNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W SPWG+GRPGWHIECSAMS  YLG+ FD+HGGG DLIFPH
Sbjct: 173 KRDPMDFALWKAAKPGEPSWNSPWGQGRPGWHIECSAMSLKYLGENFDMHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   E  A  W+HNGF+ +   KMSKS GNF  + E+L+        +  
Sbjct: 233 HENEIAQSEAATG-EPLARYWLHNGFITVNQEKMSKSLGNFFLVREILD-------KFSP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
            V+R  +L THYR P+DF  ++L   E  L +   +    G                   
Sbjct: 285 EVVRFFLLGTHYRSPLDFDDEKLAVVEKGLDRIRTSIQLLGEACQRAGVDFSMINAKEKP 344

Query: 347 -------------------IDPAVLSALYNDLNTVSAIQALHKLARESTK---------- 377
                              I  +   A+ +D NT  A+ +L +LA+E+            
Sbjct: 345 ARVTSIIDTRHSSMKAFIKIKTSFEQAMEDDFNTALAVGSLFELAKETNILVQSLGPKIS 404

Query: 378 ------NHDLLPIFNASAHILGIE------------VCKEHLNKNISIAIEKLVQERLIL 419
                       +F     +LGI                E  +  +   ++ L+  R   
Sbjct: 405 EQEKACLLQAAELFKLFNQVLGIFKEDLCTGYPLVTPVDESGDGMLEAVMQMLLDIRNEA 464

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
            K K ++ +D IR  L+    ILED        + TRWK++ 
Sbjct: 465 RKNKNWALSDRIRDALKDINVILEDT------PQGTRWKKQA 500


>gi|148254912|ref|YP_001239497.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166200130|sp|A5EHE7|SYC_BRASB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146407085|gb|ABQ35591.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 472

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 215/478 (44%), Positives = 297/478 (62%), Gaps = 29/478 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T  R+   F  +  +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MELRLYDTATREKRPFVPLHRNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITD+DDKI  RA ++ P +P+N+AI  +T    +QF +D   L CL PT +
Sbjct: 61  AEHVTYVRNITDVDDKINARAARDFPGLPLNEAIRNVTELTERQFHEDVDALGCLRPTIE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
           PRAT HI +M  +I+ ++  G AY A + ++F  +++       P YG+ + R +DE   
Sbjct: 121 PRATEHIAEMRDIIERLVAGGFAYVAEDHVLFSPAAMNAANKVLPRYGALANRSLDEMIA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
           G RV    +KK+  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FD
Sbjct: 181 GARVDVAPYKKDATDFVLWKPSKPGEPSWPSPAGIAAEGRPGWHIECSAMSWKHLGETFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHENE+AQSCCA    + AN+W+HNGFL +EG KMSKS GNF+TI E+L
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTARMANVWMHNGFLQVEGEKMSKSLGNFVTIREVL 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPA 350
                    WP  V+RL ML THYR PID+T++ L E+   +  W +T+    +G    A
Sbjct: 301 AD-------WPGEVVRLNMLKTHYRSPIDWTLRGLEESAKAVDDWYRTAGDLREGRPADA 353

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHILGIEVC--------KEHL 401
           V+ AL +D+NT   +  LH L  E+     D +  F  S  +LG            K+  
Sbjct: 354 VIEALRDDINTPLMVAVLHGLRNEAASGGVDDVARFVGSLRLLGFLAEDAAQWRARKQQA 413

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +   +  +E L+ ER      K F  +D +R +L + G +L+D K   +G+ +T W+ 
Sbjct: 414 SGVDAAKVEGLIAERTAARARKDFKESDRLRDELAAMGVVLKDGK-GADGKPVTTWEM 470


>gi|28212192|ref|NP_783136.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
 gi|61216342|sp|Q890M4|SYC_CLOTE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28204636|gb|AAO37073.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
          Length = 465

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 170/488 (34%), Positives = 246/488 (50%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF  +    + MYVCGPTVY+F HIGN R  IVFD + R L Y   + 
Sbjct: 1   MKLYNTLTRQKEEFIPLKTGEVNMYVCGPTVYNFFHIGNGRTFIVFDTVRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I+RA  E         +  +  +   ++ KD   L     T  PR
Sbjct: 60  -VKFVQNFTDIDDKMIKRANDE------GITVKELGERFIGEYYKDADSLNIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  ++ ++  G+AYE + ++ F T     YG  S + I++ + G R+     
Sbjct: 113 ATEFMEEIIQFVKELVDKGYAYEIDGDVYFHTKRFNEYGKLSGQNIEDLQAGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+  DF +WK+  P EP WESPWG GRPGWHIECS M+ + LG   DIH GG DLIFPH
Sbjct: 173 KKDAMDFAIWKKQKPGEPAWESPWGMGRPGWHIECSCMAHNLLGDTIDIHAGGHDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C    +  A  W+H+ FLN++ +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSECRTG-KPFAKYWMHSAFLNIDNKKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+RL ML  HYR  ++F+ + L  A   + +      +   +   V             
Sbjct: 285 DVVRLFMLSAHYRAQLNFSEELLQSAMSAVERLYNAIYNLENLANEVKRNDLNEEEKKYI 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                     +  + +D NT  AI  +  + R+   N             L I       
Sbjct: 345 KKLDEYREKYIEKMDDDFNTADAIAVIFDMIRDINSNVKSDSSKKIIEYALSIIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++   +++   I++L+  R      K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQKSTEESVEDEIQQLIDRREKARTEKNWALADEIRDGLKERGILLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 457 PQGVRWKR 464


>gi|209363819|ref|YP_001423944.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|212212147|ref|YP_002303083.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212219210|ref|YP_002305997.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|215919193|ref|NP_820470.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|218511865|sp|Q83BL7|SYC_COXBU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206584077|gb|AAO90984.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|207081752|gb|ABS78112.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|212010557|gb|ACJ17938.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|212013472|gb|ACJ20852.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 460

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 174/482 (36%), Positives = 258/482 (53%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KI+N+L ++   F+ I+   +++YVCG TVYD+ HIG+ R  I+FD++ R LR    
Sbjct: 1   MSVKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+VRNITDIDDKII+RA +        ++ + +  +  Q   +D   L  L+P  +
Sbjct: 61  E--VTFVRNITDIDDKIIKRAGENK------ESPAALAERFIQILHEDEKALRVLSPDQE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++P++I LIQ ++ + +AY   N ++ FD     +YG  S R +DE + G RV  
Sbjct: 113 PRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEV 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGGLDL 
Sbjct: 173 SDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLK 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  +    +W+H G L +   KMSKS GN I+I E L       + 
Sbjct: 233 FPHHENEIAQSEAGE-EKPFVKLWMHAGLLEINKEKMSKSLGNIISIREAL-------KE 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLS 353
               V+R  +L  HYR P+ ++ + L    + L ++        +++             
Sbjct: 285 SDVEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYE 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------EVCK 398
           A+ +D NT  A   L ++ RE  +  D         L        +I G+      +  +
Sbjct: 345 AMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQ 404

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               +     I+KL+ +R      K + +AD IR QL   G  +ED  +       T W+
Sbjct: 405 GAKKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSD------GTSWR 458

Query: 459 QK 460
           Q+
Sbjct: 459 QE 460


>gi|153209422|ref|ZP_01947398.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165919402|ref|ZP_02219468.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|187629807|sp|A9KBJ2|SYC_COXBN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120575359|gb|EAX31983.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916918|gb|EDR35522.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 458

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 174/480 (36%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L ++   F+ I+   +++YVCG TVYD+ HIG+ R  I+FD++ R LR    E 
Sbjct: 1   MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RA +        ++ + +  +  Q   +D   L  L+P  +PR
Sbjct: 60  -VTFVRNITDIDDKIIKRAGENK------ESPAALAERFIQILHEDEKALRVLSPDQEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P++I LIQ ++ + +AY   N ++ FD     +YG  S R +DE + G RV    
Sbjct: 113 ATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGGLDL FP
Sbjct: 173 SKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +  +    +W+H G L +   KMSKS GN I+I E L       +   
Sbjct: 233 HHENEIAQSEAGE-EKPFVKLWMHAGLLEINKEKMSKSLGNIISIREAL-------KESD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  +L  HYR P+ ++ + L    + L ++        +++             A+
Sbjct: 285 VEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAM 344

Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------EVCKEH 400
            +D NT  A   L ++ RE  +  D         L        +I G+      +  +  
Sbjct: 345 DDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +     I+KL+ +R      K + +AD IR QL   G  +ED  +       T W+Q+
Sbjct: 405 KKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSD------GTSWRQE 458


>gi|89075764|ref|ZP_01162152.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89048496|gb|EAR54071.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 460

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 179/481 (37%), Positives = 254/481 (52%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+   F  I P  I MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEAFTPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+ RNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFARNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHADFDALGMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A N +++F+ S   +YG  S++ +D+ + G RV    
Sbjct: 114 ATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLN-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
              +R  ++  HYR  ++++ + L +A   L +   +         +            A
Sbjct: 286 PETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGLDTSIEAAGGEEFVARFKEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   +  +ARE          K   L       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVMFDMAREINRLKTDDVTKASALGSRMRELADVLGLLSQEPEAFLQGG 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               +    IE L+Q+RL     K +++AD  R +L + G ILED      G + T W++
Sbjct: 406 AGEDDNVAEIEALIQQRLDARAAKDWAAADEARDKLLAMGIILED------GAQGTTWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|284053526|ref|ZP_06383736.1| cysteinyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 486

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 179/504 (35%), Positives = 252/504 (50%), Gaps = 69/504 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  ++P  ++MY CG TVYD+ H+G+AR    +DV+ R L +   E 
Sbjct: 3   LKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA++       +  +  ++ +    + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRAKEH------DSTMEEVSQRFIDAYFEDLRRLNVRDANAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
            T+HI ++  LI  +   GHAY  + ++ ++    P+YG  SRR++++ +MG        
Sbjct: 115 VTDHIQEIHQLIDTLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVAVA 174

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELL+     
Sbjct: 235 DLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------STS 343
            R     V+RL +L  HYR+P+DFT + +  A                          +S
Sbjct: 289 -RPVDPMVVRLFILQGHYRKPLDFTDEAIASANNGWETLKDGLLFAQQYGAPLGWSDDSS 347

Query: 344 KGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
            G  D           A+ +D NT   +  L +LA+E  +  +LL               
Sbjct: 348 PGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTQSDRIYA 407

Query: 384 ---IFNASAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   A + G+E   +              IE LV++R    K K ++  D IR QL
Sbjct: 408 IWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRDQL 467

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           ++ G  L D    +     T W++
Sbjct: 468 QASGVTLIDRPGGE-----TLWRR 486


>gi|291567546|dbj|BAI89818.1| cysteinyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 486

 Score =  567 bits (1462), Expect = e-159,   Method: Composition-based stats.
 Identities = 179/504 (35%), Positives = 251/504 (49%), Gaps = 69/504 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+   F  ++P  ++MY CG TVYD+ H+G+AR    +DV+ R L +   E 
Sbjct: 3   LKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA++       +  +  ++ +    + +D  RL        PR
Sbjct: 62  -VNYVQNFTDIDDKILNRAKEH------DSTMEEVSQRFIDAYFEDLRRLNVRDANAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
            T+HI ++  LI  +   GHAY  + ++ +     P+YG  SRR++++ +MG        
Sbjct: 115 VTDHIQEIHQLIDTLTATGHAYAVDGDVYYSVGHFPDYGKLSRRQLEDLQMGASGRVAVA 174

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            PE   KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 175 DPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGGGG 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELL+     
Sbjct: 235 DLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------STS 343
            R     V+RL +L  HYR+P+DFT + +  A                          +S
Sbjct: 289 -RPVDPMVVRLFILQGHYRKPLDFTDEAIASANNGWETLKDGLLFAQQYGAPLGWSDDSS 347

Query: 344 KGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
            G  D           A+ +D NT   +  L +LA+E  +  +LL               
Sbjct: 348 PGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTQSDRIYA 407

Query: 384 ---IFNASAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   A + G+E   +              IE LV++R    K K ++  D IR QL
Sbjct: 408 IWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRDQL 467

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           ++ G  L D    +     T W++
Sbjct: 468 QASGVTLIDRPGGE-----TLWRR 486


>gi|238893488|ref|YP_002918222.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545804|dbj|BAH62155.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 461

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +             +      +   + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           +       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQVDDAEVAEIESLIQRRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 460

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 177/474 (37%), Positives = 255/474 (53%), Gaps = 41/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  + MYVCG TVYD+ HIG+AR MI FD++ R +R+   + 
Sbjct: 2   LKVYNTLSGKKEEFVPLVPGKVGMYVCGNTVYDYCHIGHARAMISFDIIARHIRFSGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA +       ++    +T +  +   +D  +L    P  +P+
Sbjct: 61  -LNYVRNITDVDDKIIKRAAEN------DETPESLTLRMIEAQTQDELKLGNKLPDREPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + ++I +I  ++  G AY+ +  ++ F T     YG  + RK+++   G R+  + 
Sbjct: 114 ATEFMQEIIDMISVLVDKGFAYQGSTGDVYFRTEKHEAYGKLNNRKLEDMLAGARIDVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF+LWK +   E  W+SPWG GRPGWHIECSAMS++ LG  FDIHGGG DL FP
Sbjct: 174 AKENPADFVLWKSAKEGEVHWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGGPDLKFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA+  +   N W+H G + +   KMSKS GNF T+ ++LE        + 
Sbjct: 234 HHENEIAQSECANGTD-YVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLE-------KYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
             VIR  M+ + YR PID++ Q L EA++ L +   +   + + D             A+
Sbjct: 286 PEVIRFLMVSSQYRSPIDYSEQSLLEAKVGLERMYTSLQGQALTDDYIASSYTERYQQAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH------- 400
            +D NT  AI  L  L RE  K           L    +  A +LG+             
Sbjct: 346 DDDFNTPVAISVLFDLVRELNKAKASAADNAPILAKELSVLAELLGLLGQDPEYFLKNSV 405

Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             N      IE L+ ER+   K K F+ +D IR +L  +G  L D +   +  R
Sbjct: 406 LNNGISEAEIETLIAERIQARKDKNFARSDEIRDELSEQGITLLDSREGTSWTR 459


>gi|150392183|ref|YP_001322232.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|187629786|sp|A6TWK5|SYC_ALKMQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149952045|gb|ABR50573.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 464

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 172/489 (35%), Positives = 252/489 (51%), Gaps = 58/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F  I+   +RMY CGPTVY++ HIGN R  IVFD L + L Y   + 
Sbjct: 1   MRLYNTLTRKKEVFVPIEQGKVRMYACGPTVYNYFHIGNGRTFIVFDALRKYLVYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII++A++E        +   I+ +   ++ KD   L        P+
Sbjct: 60  -VTFVQNFTDIDDKIIKKAQEEAV------SAKEISERFIVEYFKDAATLGVDQADIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++P++I  IQ ++    AYE N ++ +D S   +YG  S++ ++E + G R+     
Sbjct: 113 VTENVPEIIAFIQELLEKNVAYEVNGDVYYDVSRFEDYGKLSKQNLEELQSGARIEVNEA 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DF+LWK + P EP WESPWG GRPGWHIECSAM+  YLG+  DIHGGG DL+FPH
Sbjct: 173 KRNSLDFVLWKTAKPGEPSWESPWGSGRPGWHIECSAMAKKYLGETIDIHGGGGDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  AN WIH G+LN++ +KMSKS  NF T  E+ E        +  
Sbjct: 233 HENEIAQSEACTG-KTFANYWIHVGYLNIDNKKMSKSLDNFFTPREIAE-------EYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKGII 347
             +R  ML  HYR P++F+ + L  A+  L +                      T K  I
Sbjct: 285 ESLRFFMLSAHYRTPVNFSRELLESAKSGLERLYNAKNHLEHILENTKVEEMKETEKEWI 344

Query: 348 D------PAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
           D            + +D NT   I  +  L R+                   +      +
Sbjct: 345 DSLTHYSEEFNRVMDDDFNTADGIAVIFDLVRDMNTYITGEASKEAVKAAYGMLVELTGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+   +E   +++   I +L++ R      K F+ +D IR  L+ KG +LED       
Sbjct: 405 LGLLRKEE---ESLDKEIGRLIEARQQARIEKNFTKSDEIRDYLKEKGIVLEDT------ 455

Query: 452 QRMTRWKQK 460
            +  +W+++
Sbjct: 456 SQGVKWRKE 464


>gi|260596903|ref|YP_003209474.1| cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260216080|emb|CBA28825.1| Cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 461

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  I FDV+ R LR+   + 
Sbjct: 2   LKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        +    +  +   +   D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GEDFVALVDRMVAEMHNDFDALNILRPESEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A N +++F   S  +YG  SR+ +++ + G RV    
Sbjct: 114 ATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 SKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDRSVAAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + L       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N +    IE L+ +RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQTNDDEVAEIEALIVKRLEARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|254781689|sp|C0QRE6|SYC_PERMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 487

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/509 (34%), Positives = 254/509 (49%), Gaps = 73/509 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL  K  EF  I P  +++Y CG TVYD  H+G+ R +IVFDV+ R LRY   
Sbjct: 1   MSLKVYNTLTGKKEEFVPIKPGEVKIYTCGVTVYDVNHVGHGRSLIVFDVIRRYLRYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN TD+DDKII RA+ E          ++I  +  +++ +D           +
Sbjct: 61  N--VYFVRNFTDVDDKIINRAKNECLP------FTVIADRYIKEYFQDAENFRIEPADVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HIP +I  IQ +I  G+AYE   ++ F       YG  S+R +DE   G RV   
Sbjct: 113 PRVTTHIPDIIDFIQRLIDKGYAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL F
Sbjct: 173 EKKRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQ+      +  A  WIHNG + + G+KMSKS GN+IT+ E+          +
Sbjct: 233 PHHENELAQAEALS-DKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
              V+RL +L  HYR P+DF+ +++ E +    +         I+               
Sbjct: 285 DPDVLRLLVLSVHYRSPLDFSWEKMEETKKAYERLKGAIDEYEILKKLPENPDFDEHLYD 344

Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI 391
                +    +A+ +D NT  A+ +L  L RE     D            L  +  ++ +
Sbjct: 345 EIAKAEQGFYAAMSDDFNTPEALASLFTLVREMNILRDKAVKSGGISKKALESYKEASDV 404

Query: 392 L--------GI-----------EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYI 431
           L        G+           E+  E   + I    +E L++ R    K K+F  ADYI
Sbjct: 405 LHSIGKEIFGLFDSLQPCIEVEEIKVEKAEEKIDTQLVEALIEVRNKARKEKQFEIADYI 464

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           R++L   G ++ED          T+WK+K
Sbjct: 465 REKLSQLGIVIEDT------PVGTKWKKK 487


>gi|218439673|ref|YP_002378002.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226735050|sp|B7K7T8|SYC_CYAP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218172401|gb|ACK71134.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 486

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 171/506 (33%), Positives = 252/506 (49%), Gaps = 70/506 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R+   F+ ++P  +RMY CG TVYD+ H+G+AR  +V+DV+ R L++   
Sbjct: 1   MTLTIYNTLTRQKEPFEPLEPGKVRMYCCGITVYDYCHLGHARTCLVWDVVRRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y++N TDIDDKI+ RAR+E        ++  ++ +  + + +D  RL        
Sbjct: 61  Q--VQYIQNFTDIDDKILNRARKE------GTSMEDVSERFIKAYFEDMDRLHIQKADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  L+  +   G+AY A+ ++ +   S  +YG  S RK+++ + G      
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYPADGDVYYSVRSFSDYGKLSGRKLEDLQAGASGRVD 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E   KK+P DF LWK + P EP WESPWG GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 LEDSESQKKKDPFDFALWKAAKPGEPSWESPWGLGRPGWHIECSAMVRERLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI +LL    
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWMHNGMVKVGGEKMSKSLGNFTTIRDLLA--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
                +    +RL +L THYR P+DFT + L  A        +                 
Sbjct: 289 ----QFDPMAVRLFILQTHYRNPLDFTPKALEAATNGWQTLQEGLLFGYLFGEKLGWDQL 344

Query: 340 ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
               +      +      A+ +D N    +  L ++A++  K  ++L             
Sbjct: 345 SSNSSVREDNPLVQQFQDAVDDDFNFAGGLAVLFEIAKDLRKEGNILVHQEKTETSPEKL 404

Query: 383 ----PIFNASAHILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                     + +LG+E     V +E  +      IE L+++R    K K F+  D IR 
Sbjct: 405 KEQWQTLVQLSQVLGLEAHPPQVHRETTDGLTDAEIETLIEQRTQARKAKNFAEGDRIRD 464

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
            L++KG  L D         +T+W +
Sbjct: 465 DLKAKGITLIDQSGG-----ITKWHR 485


>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 465

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 186/485 (38%), Positives = 262/485 (54%), Gaps = 50/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ HIG+AR ++VFDV+ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDVVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +TS+ T+    D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIQSLTSRFTRAMNVDFDALGVERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPQDPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
              + A V+R  ++ THYR P++++   L +A   L++   T+      D A        
Sbjct: 288 --KFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLY-TALKDATPDVAPLDWSEAH 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV--CKEHLNK 403
                +A+ +D NT  A+  L +LA E  +  +  L       A +LG+     +E L +
Sbjct: 345 ARRFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLKRLAGVLGLLGREPREFLQQ 404

Query: 404 N---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                         IE  +  R+   + K ++ AD IR +L   G  LED          
Sbjct: 405 AAGAARAGALEPEEIEAKIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS----- 459

Query: 455 TRWKQ 459
           T W++
Sbjct: 460 TEWRR 464


>gi|327393038|dbj|BAK10460.1| cysteinyl-tRNA synthetase CysS [Pantoea ananatis AJ13355]
          Length = 461

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        ++I  +T++   +   D   L  L P  +PR
Sbjct: 61  -VNYVRNITDIDDKIIKRANEN------GESIETLTNRMIAEMHSDFDALGILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP+++ L++ +I  GHAY A N +++FD  S  +YG+ SR+ +D+ + G RV    
Sbjct: 114 ATRHIPEIVELVEKLIARGHAYVAENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPSWPSPWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  +++    L +A   L +             +      +     A
Sbjct: 286 AETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDRNAVAHGGEAFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         + L       A++LGI   +  +     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDMTAANALAAKLREIANVLGILQQEPEVFLQSS 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N      IE+ V+ R      K ++ AD  R +L + G I+ED      G + + W+
Sbjct: 406 AQGNDEEVAEIERWVKARADARAAKDWAQADVARDKLNALGVIVED------GPQGSSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|314937165|ref|ZP_07844512.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655784|gb|EFS19529.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 466

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 173/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEAFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  +  + F +D   L     T  PR
Sbjct: 60  TVDYVSNFTDVDDKLINRSKE------LNESVPEIADRYIKAFYEDVGALNVKRATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE+N ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKQLVDDGYAYESNGDVYFRTRQFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G+GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGIIDP- 349
            V+R  M+  HYR PI++ V+ +  A+  L +   +               T    ID  
Sbjct: 286 DVLRFFMISVHYRSPINYNVELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                   + + +D NT +A+ A + L++ + K                 ++   + +LG
Sbjct: 346 NDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTKVIQRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDTLKEQNIILEDTPQGVRFRR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 469

 Score =  567 bits (1461), Expect = e-159,   Method: Composition-based stats.
 Identities = 185/492 (37%), Positives = 251/492 (51%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+   +RMYVCGPTVY+  HIGNARPMI FD + R   Y   E 
Sbjct: 1   MKIFNTLSRRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E          ++I+ +   +  KD   +  L  T  P 
Sbjct: 60  -VNYVSNFTDVDDKIINKAIEE------GVDAAVISQRYINECKKDMAAMNVLPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M  +I  +I  GHAY A +  + F   S  +YG  S + IDE + G R   V 
Sbjct: 113 ATQEIEGMEDMIGKLIKSGHAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++  DF+LWK     EP WESPW +GRPGWHIECS MS  YLG+  DIHGGG DL
Sbjct: 173 GEDGKEDSNDFVLWKPKKEGEPYWESPWSKGRPGWHIECSVMSKKYLGEQIDIHGGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   +  AN W+HN FLN++ +KMSKS GNF T+ ++ E       
Sbjct: 233 IFPHHENEIAQSESASG-KSFANYWMHNAFLNIDNKKMSKSAGNFFTVRDISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------- 343
            +   V+R  ML  HYR P++F+ + +  A+  L +      +                 
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEAAKNSLERILTGMDNIKTVIARNNTAPITDAE 344

Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
                   ++      A+ +D NT  A+ A+ +L + S    +          LL +   
Sbjct: 345 LSNLEIAKVLKDKFADAMDDDFNTADAVSAIFELVKLSNTTLNENSTVEYAKGLLNVIEP 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI    E   + +   IE L+  R    K K F+ AD IR  L  KG +LED + 
Sbjct: 405 LCDVLGI--ITERKTEILDSEIEDLIARRTQARKNKDFALADKIRNDLLEKGIVLEDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|257466691|ref|ZP_05631002.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917843|ref|ZP_07914083.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691718|gb|EFS28553.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 473

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 188/493 (38%), Positives = 271/493 (54%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   +  F       + MYVCGPTVY++ HIGNARP IVFD + R   Y   + 
Sbjct: 2   IKIYNTLSASLDTFTPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            VTYV+N TD+DDK+I+RA +E         +  +  +  Q +++D   L        +P
Sbjct: 61  -VTYVQNFTDVDDKMIKRANEE------GTTVEDVAHRYIQAYLEDMKSLHIKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEK 182
           +AT HI +MI +IQN+I  GHAYE+N ++ F  ++    YG+ S++KI++ + G R+   
Sbjct: 114 KATEHIQEMIDMIQNLIDKGHAYESNGDVYFRVATYHQEYGALSKQKIEDLQSGARIEVT 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS+ Y G  FDIHGGG DLIF
Sbjct: 174 EIKESPLDFALWKASKPGEPSWKSPWGEGRPGWHIECSAMSNKYFGDSFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+      AN W+HNG++N++G KMSKS GNF+ + ++L       + +
Sbjct: 234 PHHENEIAQSKCSCGGS-FANYWMHNGYINIDGVKMSKSLGNFVLLRDIL-------KHF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------QT 340
              VIR  ML  HYR+P++F+   L++A+I L +                        + 
Sbjct: 286 SGKVIRFFMLSAHYRKPMNFSDAELSQAKIALERIENSLIRANEISETSIALEGSAGVEL 345

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASA----- 389
             +        + A+  D NT  AI  + +L RE  K      N +   I   +A     
Sbjct: 346 KKALEDTKEKFIEAMDEDFNTAQAIGVIFELVRELNKTLDSSYNQEAYVIVKETADYLYH 405

Query: 390 ---HILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LGIEV  E   +N+++  +E +++ R      K ++ +D IR +L   G  ++D 
Sbjct: 406 ILYDVLGIEVEVETKVENLTVDLVEFILELRREARAEKNWALSDRIRDRLAELGIQIKDG 465

Query: 446 KNPDNGQRMTRWK 458
           K+       T W+
Sbjct: 466 KDS------TTWR 472


>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 479

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 196/487 (40%), Positives = 268/487 (55%), Gaps = 61/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  +   F  ++ + +++YVCG TVYD+ HIG+AR  IVFD + R L+Y   + 
Sbjct: 2   LKIFNTLSGEKEVFTPLEDNKVKIYVCGVTVYDYCHIGHARSSIVFDTIRRYLKYKGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII+RA +E      N +I+ IT    +   +D  +L  L P + PR
Sbjct: 61  -VTFVKNFTDVDDKIIKRANEE------NKSINEITDFFIKAHDEDMDKLNILRPDYTPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI L + +I  G AYE+N ++ F   +  +YG  S+R +D+   G RV     
Sbjct: 114 ATEYIDGMIKLCEKLIEKGFAYESNGDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNEI 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWKRS   EPGW+SPWGRGRPGWHIECS MS+  LG  FDIHGGG DLIFPH
Sbjct: 174 KEDPLDFALWKRSKEGEPGWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  E  A  WIHNGF+N+   KMSKS GNF TI ++L       +    
Sbjct: 234 HENEIAQSEAAEGKE-FARYWIHNGFVNINKEKMSKSLGNFFTIRDVL-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDP-- 349
            V+R  +L THYR P+DF+ + L EAE  L +                    KG ID   
Sbjct: 286 EVLRFFLLTTHYRSPLDFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKGKIDEIV 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLAREST-----------------KNHDLLPIFNA 387
                    ++ +D NT SAI  + +L +                    +  ++  I   
Sbjct: 346 DRFKRDFEESMDDDFNTASAISNIFELIKGVNLLLSERLNSEDLNYLKVRFEEVKAIIR- 404

Query: 388 SAHILGI--EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
              +LGI  +   E    N+SI    ++KL++ER I  + K FS AD IR +L++KG  L
Sbjct: 405 --DVLGILTKTASEWFKMNLSIDESELQKLIEEREIARRNKDFSKADAIRNELKTKGVEL 462

Query: 443 EDYKNPD 449
            D     
Sbjct: 463 LDTPTGT 469


>gi|283795457|ref|ZP_06344610.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
 gi|291077118|gb|EFE14482.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
 gi|295091141|emb|CBK77248.1| cysteinyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
          Length = 469

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 177/487 (36%), Positives = 249/487 (51%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E            I+ +   +  KD   +     T  P+
Sbjct: 60  -VNYVSNFTDVDDKIIRKAIEE------GVDAQTISERYIAECKKDMEMMNVKPATVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M  +IQ +I  GHAY A +  + F T S   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMEEMIQELIDKGHAYVAKDGTVYFRTKSFKEYGKLSHKNLEDLQSGFRELKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG   DIH GG DL
Sbjct: 173 GEEDKEDPTDFVLWKPKKDGEPFWESPWCEGRPGWHIECSVMSKKYLGDSIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 VFPHHENEIAQSEAANG-KPFAKYWMHNAFLNIDNKKMSKSLGNFRTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
            +   V+R  ML  HYR P++F+ + +  +   L +                        
Sbjct: 285 QYDLQVLRFFMLSAHYRSPLNFSAELMEASRNGLERILTGVERLRDLLAKAAEKEMSGEE 344

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
            +   +   +     +A+ +D NT  AI A+ ++ + S              +L      
Sbjct: 345 RRNLETAAELVKKFEAAMDDDFNTADAISAIFEMVKLSNSTISEESSRAYLEELKGSIER 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI    E   + +   IE +++ER    K K F+ AD IR +L   G +LED + 
Sbjct: 405 LCEVLGI--ITEKKAEVLDDEIEAMIEERQQARKAKNFALADEIRGKLLDMGIVLEDTRE 462

Query: 448 PDNGQRM 454
               +R+
Sbjct: 463 GVKWKRV 469


>gi|16763917|ref|NP_459532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|62179146|ref|YP_215563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167990531|ref|ZP_02571631.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168231534|ref|ZP_02656592.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|168261021|ref|ZP_02682994.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|168818841|ref|ZP_02830841.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|194472796|ref|ZP_03078780.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197251404|ref|YP_002145520.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205351838|ref|YP_002225639.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856015|ref|YP_002242666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224582374|ref|YP_002636172.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|238911333|ref|ZP_04655170.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|21264009|sp|Q8ZR68|SYC_SALTY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81309761|sp|Q57S29|SYC_SALCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710849|sp|B5EYD7|SYC_SALA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226710851|sp|B5R6X0|SYC_SALG2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558784|sp|B5QUV0|SYC_SALEP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781692|sp|C0PVI8|SYC_SALPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|16419048|gb|AAL19491.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|62126779|gb|AAX64482.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194459160|gb|EDX47999.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197215107|gb|ACH52504.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|205271619|emb|CAR36445.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205330830|gb|EDZ17594.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205333999|gb|EDZ20763.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|205343946|gb|EDZ30710.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205349964|gb|EDZ36595.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|206707818|emb|CAR32103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224466901|gb|ACN44731.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261245816|emb|CBG23614.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267992259|gb|ACY87144.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|301157145|emb|CBW16629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312911570|dbj|BAJ35544.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|320084812|emb|CBY94602.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
 gi|321226119|gb|EFX51170.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
 gi|322713608|gb|EFZ05179.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|323128857|gb|ADX16287.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
 gi|332987486|gb|AEF06469.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 461

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLAEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|323439800|gb|EGA97517.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O11]
          Length = 466

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 172/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++   E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K FS AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKKKDFSRADEIRDMLKSQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|295702329|ref|YP_003595404.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294799988|gb|ADF37054.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 465

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 164/487 (33%), Positives = 255/487 (52%), Gaps = 57/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL R+   F  ++ + ++MYVCGPTVY++ HIGNARP IVFD + R L +   + 
Sbjct: 3   IKLYNTLTRQKETFVPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A++      + + +  I ++    + +DT+ L C      PR
Sbjct: 62  -VEYVSNFTDVDDKLIKAAKE------LGEDVPTIANRFIDAYFEDTSALGCKHADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I  ++   +AYE+  ++ + T     YG  S + IDE + G R+     
Sbjct: 115 VTENMDIIIEFIDELVKKEYAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVGEK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 175 KEDPLDFTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +    
Sbjct: 235 HENEIAQSEALTG-KSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKHDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            ++R  +L  HYR PI++  + L        +      +                     
Sbjct: 287 SLLRFFILSVHYRHPINYNEEILENTRKGFERLQTAYGNLTHRLEAATNLQEDASEWFEK 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPI----FNASAHIL 392
              +    +  + +D NT +AI  L +LA+++         + D++      F      +
Sbjct: 347 LKELRETFVEEMDDDFNTANAISVLFELAKQANLYLLEQTTSTDVIEAFIKEFKELGTAI 406

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI   +  L   +   I++L+Q+R+   K + F  AD IR +L++K  ILED        
Sbjct: 407 GITFGEAEL---LDEEIDQLIQDRIQARKDRNFQLADQIRDELKAKNIILEDT------A 457

Query: 453 RMTRWKQ 459
           + TRWK+
Sbjct: 458 QGTRWKR 464


>gi|321313765|ref|YP_004206052.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320020039|gb|ADV95025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 466

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 163/489 (33%), Positives = 255/489 (52%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   
Sbjct: 1   MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I+ +  + + +D + L C      
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTISERFIKAYFEDVSALGCRKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR   ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+   
Sbjct: 113 PRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              ++R  ML  HYR PI+++ + L   +   ++     ++                   
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDL-------LPIFNASAH 390
                   A   A+ +D NT +AI  L  LA+ +     K+H         + +F+    
Sbjct: 345 EKVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED      
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|299133613|ref|ZP_07026807.1| cysteinyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591449|gb|EFI51650.1| cysteinyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 464

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 237/474 (50%), Positives = 311/474 (65%), Gaps = 31/474 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL +    F+ IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MELRLYDTLTKDKRAFKPIDPRNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E+ VTYVRNITD+DDKI +RA +++P +P+N+AI  +T K   QF  D   L CL PT +
Sbjct: 61  EQHVTYVRNITDVDDKINDRALRDYPGLPLNEAIRKVTEKTATQFHADVDALGCLKPTVE 120

Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT+ +         M+ LI+ +I  GHAYEAN E++FDT+S+P+YG  S R++DEQ+ 
Sbjct: 121 PRATDFVLPRADGKADMVSLIKTLIDRGHAYEANGEVLFDTASMPDYGKLSGRRLDEQQA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G R+    HKK+PADF+LWK+S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARIAVDAHKKHPADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHG 240

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL   
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHAMANYWLHNGFLQVEGEKMSKSLGNFVTINELL--- 297

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--VLS 353
               + WP  V+RL ML THYR PID+TV+ L E+  +L  W  T+       PA  VL 
Sbjct: 298 ----KDWPGEVVRLNMLKTHYRSPIDWTVKGLEESAKVLDDWYATAGDIKGSAPAGTVLD 353

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL-LPIFNASAHILGI--------EVCKEHLNKN 404
            L +DLNT   + ALH L  ++ +  +     F +S  +LG         +  K+  +  
Sbjct: 354 TLADDLNTAQTVAALHGLRHQAERGGEAERNEFASSLRLLGFLAETRADWDARKQEASGV 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  +  L+ +R      K +  +D IR +L + G  ++D K        T W+
Sbjct: 414 DAAQVSALIADRTAARARKDWKESDRIRDELAAMGVAIKDSK------EGTTWE 461


>gi|163760568|ref|ZP_02167649.1| cysteinyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282183|gb|EDQ32473.1| cysteinyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 505

 Score =  566 bits (1460), Expect = e-159,   Method: Composition-based stats.
 Identities = 250/503 (49%), Positives = 324/503 (64%), Gaps = 45/503 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++K +NTL R   EFQ ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 2   SELKFWNTLTRVKEEFQPIDKDNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI  RA +++P +P+N+AI+ +T K   +F KD   L CL PTH+
Sbjct: 62  ADHVTYVRNITDVDDKINARALRDYPDLPLNEAIAKVTEKTANRFHKDAAALGCLEPTHE 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PRAT HI  M+ +IQ +I  G+AY  +     E++F  SS+P+YG  S RK ++Q+ G R
Sbjct: 122 PRATAHIDGMVKMIQTLIDKGNAYVTSGREGREVLFAVSSMPDYGKLSNRKPEDQQAGAR 181

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGKV 230
           +  + HK+NPADF+LWK S   EPGW+  +          GRPGWHIECS MS H+LG  
Sbjct: 182 IAVEDHKRNPADFVLWKESASDEPGWDGVFADGGQTISIHGRPGWHIECSVMSEHHLGAT 241

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDLIFPHHENEIAQSCCA   ++ AN+W+HNGFL +EG+KMSKS+GNF+TI E
Sbjct: 242 FDIHGGGLDLIFPHHENEIAQSCCAHGNDRMANLWMHNGFLQVEGKKMSKSDGNFVTIAE 301

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKG 345
           LLET KFGGR WP  V+RLAMLMTHYREPIDF+V+RL EA I LS W      +     G
Sbjct: 302 LLETDKFGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEANISLSNWLGPHARRGVPEDG 361

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------FNASAHILGI- 394
            +   V+ AL +DL+  +A   +  +  ES K  DL               A+   LG+ 
Sbjct: 362 SVSKEVVRALSDDLDFSAAKLVIDFMLAESRKVTDLDQESIGKTKLRNDLAATLVWLGLA 421

Query: 395 ---------EVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLES 437
                       K+ L   +  A        ++  V ERL  +  K ++ AD IR +L +
Sbjct: 422 KQDEDFAVARANKQGLRAVVEAALVGLKASDVDSRVNERLAFIAAKNWAEADRIRDELLA 481

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
           +G  L+D K+P+ G+R+T W+ K
Sbjct: 482 QGIQLKDGKDPETGERVTTWEVK 504


>gi|281599852|gb|ADA72836.1| Cysteinyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|332763819|gb|EGJ94057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-671]
 gi|333021864|gb|EGK41112.1| cysteinyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 461

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 180/482 (37%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+N +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNSDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+N  DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNRMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|242372747|ref|ZP_04818321.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242349520|gb|EES41121.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 466

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 169/481 (35%), Positives = 258/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFNGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------SK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHTEYMNQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
             I     + + +D NT +A+ A + LA+ + K            +    ++   + +LG
Sbjct: 346 DEILKQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVFNKFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  ++ +   IEKL++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLKGKEADELLDEEIEKLIEERNEARKNKDFARADEIRDMLKERNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|326626876|gb|EGE33219.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 461

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 260/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A ++R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AEIVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLAEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|192361138|ref|YP_001982161.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190687303|gb|ACE84981.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 466

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 180/485 (37%), Positives = 265/485 (54%), Gaps = 50/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ + P  I MYVCG TVYD+ HIG+AR ++ FDV+ + LR      
Sbjct: 3   LQIYNTLSRQKEEFKPLKPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQG--W 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        +  + +T +      +D  RL    P  +PR
Sbjct: 61  DVTYVRNITDIDDKIIKRANEN------GEQYTDLTKRFIDYMHEDEARLGIARPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I Q+I + Q +I  G+AY A N ++ +  +   +YG  + + +DE  +G R+    
Sbjct: 115 ATAFIDQIINMNQALIDKGYAYPASNGDVYYRVTRFADYGKLTNKNVDELLVGARIEVDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP W+SPWG+GRPGWHIECSAMS    G  FDIHGGG DL FP
Sbjct: 175 IKEDPRDFVLWKAAKAGEPAWKSPWGQGRPGWHIECSAMSKDCCGTTFDIHGGGPDLPFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+  +   N W+H G + ++G KMSKS GNF TI ++LE        + 
Sbjct: 235 HHENEIAQSEAANGCK-YVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLE-------KYH 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------A 350
             V+R  ++ +HYR PI++    L EA   L ++         ++              +
Sbjct: 287 PEVVRFLLVSSHYRSPINYAEDNLVEARTGLERFYGALRDYADVESLPLTELQASDYYRS 346

Query: 351 VLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL- 401
            ++A+ +D NT  A+ +++ L RE          +   L     A   ILGI      + 
Sbjct: 347 FVAAMNDDFNTRVALASMYDLVRELNNAGKTDVERAQRLAGELKALGLILGILQENPRVF 406

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                  +  +  +++LV ER+   K K ++ AD +RKQL   G ++ED K+       T
Sbjct: 407 LQTGTSGQIAAEEVDRLVAERIQAKKEKNYARADEVRKQLADNGILIEDAKDGT-----T 461

Query: 456 RWKQK 460
           +W+++
Sbjct: 462 QWRRE 466


>gi|291482466|dbj|BAI83541.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 466

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 163/489 (33%), Positives = 254/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   
Sbjct: 1   MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I+ +  + + +D   L C      
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTISERFIKAYFEDVGALGCRKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR   ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+   
Sbjct: 113 PRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              ++R  ML  HYR PI+++ + L   +   ++     ++                   
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDL-------LPIFNASAH 390
                   A   A+ +D NT +AI  L  LA+ +     K+H         + +F+    
Sbjct: 345 EKVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED      
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|82775639|ref|YP_401986.1| cysteinyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|109894938|sp|Q32JL0|SYC_SHIDS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81239787|gb|ABB60497.1| cysteine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 461

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 257/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFNALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY  +  +++FD  + P YG  SR+ +D+   G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVVDNGDVMFDVPTDPTYGVLSRQDLDQLLAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+N  DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNTMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 463

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 176/483 (36%), Positives = 259/483 (53%), Gaps = 50/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L R+   F+ I    + MYVCG TVYD  H+G+AR M+VFDV+ R LR      
Sbjct: 2   LKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + I  +T +   +  +D   L  L P  +P+
Sbjct: 61  -VTYVRNITDIDDKIIKRAAEN------GETIQALTERFIAEMHQDADALGVLRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +P+++ +++ +I  G AY+A+  ++ +D S    YG  S R++D+ + G R+    
Sbjct: 114 ATESMPEILAMVETLIGKGLAYKADNGDVYYDVSKFEAYGKLSGRQVDDLRAGERIAVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP WESPWG GRPGWHIECSAMS+H LG+ FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKEGEPAWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF T+ E+L         +P
Sbjct: 234 HHENEIAQSEGAHDCQS-VNYWMHNGFVRIDDEKMSKSLGNFFTVREVLA-------QYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAVL 352
           A  +R  +L +HYR P+++   +L +A+  L+++  +                       
Sbjct: 286 AEAVRYFILSSHYRSPLNYAEDQLEQAKAALTRFYTSLRDVEPQPELNWQDDKEFGSRFA 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH--- 400
            A+ +D NT  A+  +  + +   K  +         L  +  +   +LG+         
Sbjct: 346 EAMDDDFNTALALSVMADVRQALNKALENNEADLAAYLAGLLLSFGDVLGLFQQDAETFL 405

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                  + + AI+ L+ ER      K +S AD IR QL   G ++ED          T 
Sbjct: 406 VGDMAEDSDADAIDALIVERNQARADKNWSRADDIRDQLSEMGIVIED------AAGKTS 459

Query: 457 WKQ 459
           W++
Sbjct: 460 WRR 462


>gi|327480668|gb|AEA83978.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 462

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 186/478 (38%), Positives = 258/478 (53%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+   + 
Sbjct: 4   LAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +        +    +  +      +D TRL  L P  +PR
Sbjct: 63  -VTYVRNITDIDDKIIRRASEN------GEPFQALVERMIAAMHEDETRLNVLRPDVEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M  +IQ +I  G AY   N ++ +       YG  SRRKI++ K+G R+    
Sbjct: 116 ATDHIAGMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDE 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+  LG+ FDIHGGG DL+FP
Sbjct: 176 AKEDPLDFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + ++G KMSKS GNF TI E+LE        + 
Sbjct: 236 HHENEIAQSEAATG-KLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------KYH 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR PI+++   L EA+  L ++           PA          + +
Sbjct: 288 PEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAGGDEFVARFAAVM 347

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-------EH 400
            +D N+  A   L ++ RE  +  +        L       A +LG+   +         
Sbjct: 348 DDDFNSPEACAVLFEMIREVNRLRESDLTAAAALAARLKELAGVLGVLQLEPGAFLQAGA 407

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K  +  +E L+  RL     K +  +D IR QL + G +LED K        T W+
Sbjct: 408 AGKVDAAEVEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGK------GGTTWR 459


>gi|238920879|ref|YP_002934394.1| cysteinyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
 gi|259511831|sp|C5B8V6|SYC_EDWI9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|238870448|gb|ACR70159.1| cysteinyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 461

 Score =  566 bits (1459), Expect = e-159,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +        ++   +T +   +  +D   L    P  +PR
Sbjct: 60  RLKYVRNVTDVDDKIIKRALENQ------ESCEQLTERMLAEMHRDFDALNIARPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I   HAY A N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDGA-YVNCWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +              T+         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDVAAQPTADETFTTRFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHL---- 401
           + +D NT  A   L  +ARE  +         + L       AH+LG +E   EH     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKGEDMAQANALAAQMRGLAHVLGLLEQTPEHFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                +    IE L+++R      K ++ AD  R  L + G +LED      G + T W+
Sbjct: 406 AAAGDDEVAQIEALIRQRNDARAAKAWALADEARDSLNAMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|301168673|emb|CBW28264.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 459

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 260/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +P 
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNKARAAKDWAAADAARNELTAMGIVLED------GPNGTTWRKQ 459


>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 465

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 168/488 (34%), Positives = 258/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ RK  EF  +    ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVFNTIARKKEEFIPLSEKEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA+++      N  +  +  K  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRAKED------NITVKELGDKFIEEYYKDADSLNIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I +++  ++ +I  G+AYE + ++ F T    +YG  S + +++ + G R+     
Sbjct: 113 ATEYINEIVDFVKELIDRGYAYEVDGDVYFHTKKFKDYGKLSGQNLEDLQAGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP W+SPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAVWKSQKPGEPAWKSPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLAFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS      +  A  W+H+ F+N+   KMSKS  NF T  E+LE        + +
Sbjct: 233 HENEVAQSEARTG-KTFAKYWMHSAFVNVNNEKMSKSLNNFFTAREILE-------KYDS 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV--- 351
            VIRL ML  HYR  I+F+++ L   +  + +   +          +  + ++D  V   
Sbjct: 285 DVIRLFMLSGHYRTQINFSMESLESMKAAMDRLYNSISNLESLLEETKQEELMDQEVEYI 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  A+  +  L R+   N  +          L +       
Sbjct: 345 KILDGYKEKYIEKMDDDFNTADAVSVIFDLIRDINTNVKIDSSKKLIKHCLNLIKELGKP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   ++    N+   IE L++ER    K K ++ +D IR  L+ +G +LED       
Sbjct: 405 LGI--LQKSKKGNLEEKIEALIEERQQARKDKNWALSDKIRDDLKEQGILLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWK+
Sbjct: 457 PQGVRWKR 464


>gi|23015242|ref|ZP_00055024.1| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 460

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 214/481 (44%), Positives = 274/481 (56%), Gaps = 46/481 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R    F+ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL+  Y 
Sbjct: 1   MPLVLYNTLTRTKDVFEPLVPGHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLKTLY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YVRN+TD+DDKI  +A+         + IS+IT + T  F +D   L CL P  +
Sbjct: 60  -PSVRYVRNVTDVDDKINAKAKA------TGEPISVITERTTALFHEDIGALNCLMPDVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QMI +I+ +I  G AY A   ++F   ++ +YG+ SRR  DE   G RV   
Sbjct: 113 PRATAHIGQMIAMIERLIEKGFAYAAEGHVLFAVGAMADYGALSRRSSDEMIAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK+P DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGG DL+F
Sbjct: 173 PYKKDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSLQHLGETFDIHGGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA+  +  A  W+HNG+L +EG KMSKS GNF T+ +LL          
Sbjct: 233 PHHENEIAQSTCANG-KPFARFWLHNGWLMVEGEKMSKSLGNFFTVRDLLG-------QA 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLS 353
           P   IRLAML THY +P D+T   L +A+  L +          +D           +L+
Sbjct: 285 PGEAIRLAMLATHYHQPFDWTSDGLKQAKATLDRLYTALRGAADVDASGYEAEVPLEMLA 344

Query: 354 ALYNDLNTVSA-IQALHKLARESTKNHDL------LPIFNASAHILGIEVCKEH------ 400
           AL +DLNT    I  LH+LA    K   L           AS H+LG+            
Sbjct: 345 ALKDDLNTPLXPISHLHELAGALNKATGLEDKARRKGALLASGHLLGLLYQDPEAWFKGT 404

Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE  +  R    K K F+ AD IR+ L +KG +LED      G   T WK
Sbjct: 405 GAADGPADAEIEAAIIARTEARKAKNFAEADRIRQDLAAKGVVLED------GAGGTTWK 458

Query: 459 Q 459
           +
Sbjct: 459 R 459


>gi|257452930|ref|ZP_05618229.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059471|ref|ZP_07923956.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313685147|gb|EFS21982.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 473

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 189/493 (38%), Positives = 271/493 (54%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   +  F       + MYVCGPTVY++ HIGNARP IVFD + R   Y   + 
Sbjct: 2   IKIYNTLSASLDTFTPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            VTYV+N TD+DDK+I+RA +E         +  +  +  Q +++D   L        +P
Sbjct: 61  -VTYVQNFTDVDDKMIKRANEE------GTTVEDVAHRYIQAYLEDMKSLHIKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEK 182
           +AT HI +MI +IQN+I  GHAYE+N ++ F  ++    YG+ S++KI++ + G R+   
Sbjct: 114 KATEHIQEMIDMIQNLIDKGHAYESNGDVYFRVATYHQEYGALSKQKIEDLQSGARIEVT 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS+ Y G  FDIHGGG DLIF
Sbjct: 174 EIKESPLDFALWKASKPGEPSWKSPWGEGRPGWHIECSAMSNKYFGNSFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+      AN W+HNG++N++G KMSKS GNF+ + ++L       + +
Sbjct: 234 PHHENEIAQSKCSCGGS-FANYWMHNGYINIDGVKMSKSLGNFVLLRDIL-------KHF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
              VIR  ML  HYR+P++F+   L++A+I L +   +      I               
Sbjct: 286 SGKVIRFFMLSAHYRKPMNFSDAELSQAKIALERIENSLIRAHEISETSIALEGSAGVEL 345

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASA----- 389
                      + A+  D NT  AI  + +L RE  K      N +   I   +A     
Sbjct: 346 KKALEDTKGKFIEAMDEDFNTAQAIGVIFELVRELNKTLDSSYNQEAYVIVKETADYLYH 405

Query: 390 ---HILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LGIEV  E   +N+++  +E +++ R      K ++ +D IR +L   G  ++D 
Sbjct: 406 ILYDVLGIEVEVETKVENLTVDLVEFILELRREARAEKNWALSDRIRDRLAELGIQIKDG 465

Query: 446 KNPDNGQRMTRWK 458
           K+       T W+
Sbjct: 466 KDS------TTWR 472


>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 462

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 187/483 (38%), Positives = 265/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++   F+ I+   + +YVCG TVYD+ H+G+AR +++FDV+ R LR Y+   
Sbjct: 2   LKIYNTLSKQKEVFRPINADKVGIYVCGMTVYDYCHMGHARILVIFDVIIRHLRRYF--P 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA      I   + I  +T++      +D   L  L P  +PR
Sbjct: 60  NVEYVRNITDIDDKIIKRA------IENKEDIYALTNRFIDAMHEDERALGVLPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN + Q+ Y+I+++I  G AY+A N ++ +      NYG  SR+ ID+ + G R+  + 
Sbjct: 114 ATNAMKQIFYMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKLSRKNIDKLEAGARIEIES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAMS+H+LG  FDIHGGG+DL FP
Sbjct: 174 AKKNPLDFVLWKMSKPNEPSWDSPWGQGRPGWHIECSAMSTHHLGNHFDIHGGGMDLSFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H GF+N++  KMSKS  NF TI  +LE       S+ 
Sbjct: 234 HHENEIAQSEGANNC-TFVNTWMHIGFVNIDDEKMSKSLNNFFTIRSILE-------SYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------IIDPA 350
              +R  ++ +HYR P++F+   L +A+  LS+                           
Sbjct: 286 CETLRYFIMSSHYRSPLNFSDDNLNKAKSSLSRLYTAIRGLNTSSTVTEKVPMYFDYSVR 345

Query: 351 VLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEV--CKEH 400
              AL ND NT  A+  L +LA+           + + L  +       +GI      + 
Sbjct: 346 FNEALDNDFNTPIALSILFELAKTVNLQRKKDVDQANALAQLLKKLGDYIGILQMDADKF 405

Query: 401 LNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           L + IS     ++  +  R      K F+ +D IR +L   G +LED  N       T W
Sbjct: 406 LKQGISLSNSEVDVKITSRNEARADKNFALSDQIRDKLAELGIVLEDNAND------TTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RRK 462


>gi|323443098|gb|EGB00718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 466

 Score =  566 bits (1458), Expect = e-159,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 261/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y     
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N ++  I  K    F +D   L     T  PR
Sbjct: 61  -VEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I++++  G+AYE+  ++ F T     YG  S + ID+ K+G R+    H
Sbjct: 114 VMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRIFEGYGKLSHQSIDDLKVGARIDAGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++   E  W+SP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   + +   AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHV-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A   L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I     + + +D NT +AI A + LA+ + K       + +++  F A     + +LG
Sbjct: 346 DAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ ++ +   +EKL++ER    K K F+ AD IR  L+S+  ILED       +R
Sbjct: 406 VPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQSIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|172056119|ref|YP_001812579.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229558633|sp|B1YGS9|SYC_EXIS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171988640|gb|ACB59562.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 465

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 259/487 (53%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN++  K   F+ ++   ++MYVCGPTVY++ HIGNARP IVFD + R   Y   + 
Sbjct: 2   IQLYNSMTGKKEPFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYFTYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A +      + +    +T +  + +  DT  L        P 
Sbjct: 61  -VKYVSNFTDVDDKIIRTANE------LGEDYHALTKRFIEAYHADTGALNVQKADIHPL 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ ++  G+AY ++ ++ F T S  +YG  S++ IDE + G R+     
Sbjct: 114 VTETMDDIIAFIEVLVKKGNAYASSGDVYFRTRSFKDYGQLSQQSIDELRSGARIEVGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W SPWG GRPGWHIECSAM+  YLG   DIH GG DL FPH
Sbjct: 174 KEDPLDFVLWKAAKPGEPAWTSPWGEGRPGWHIECSAMAKKYLGDTIDIHAGGQDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +  AN W+HNGFLN+E  KMSKS GNF+T++E +       ++   
Sbjct: 234 HENEIAQSEACNSQK-FANYWMHNGFLNIENEKMSKSLGNFLTVHEAI-------QAVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
            V+R  ML   YR PI+++   + +A   L++  ++  +                     
Sbjct: 286 MVLRFFMLSVQYRHPINYSRDLIDQAANGLARIRESVANVEHRLTMTADLGTATEKWLNR 345

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHIL 392
              I    ++++ +D NT +A+  L  L++E+                 L +F   + +L
Sbjct: 346 IEEIKQHFVTSMDDDFNTANAVTDLFDLSKEANLYLGEDQVAKEVLERFLAVFQELSTVL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ +  E     +   +E+L+++R    K + F+ AD IR QL  +G +LED        
Sbjct: 406 GVTLTIEK--GLLDEEVEQLIRDRDTARKERDFARADAIRDQLRDQGILLEDT------A 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGMRWKR 464


>gi|161830739|ref|YP_001597327.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|187629808|sp|A9N924|SYC_COXBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|161762606|gb|ABX78248.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 458

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 173/480 (36%), Positives = 258/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+L ++   F+ I+   +++YVCG TVYD+ HIG+ R  I+FD++ R LR    E 
Sbjct: 1   MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RA +        ++ + +  +  Q   +D   L  L+P  +PR
Sbjct: 60  -VTFVRNITDIDDKIIKRAGENK------ESPAALAERFIQILHEDEKALRVLSPDQEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P++I LIQ ++ + +AY   N ++ FD     +YG  S R +D+ + G RV    
Sbjct: 113 ATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGGLDL FP
Sbjct: 173 SKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +  +    +W+H G L +   KMSKS GN I+I E L       +   
Sbjct: 233 HHENEIAQSEAGE-EKPFVKLWMHAGLLEINKEKMSKSLGNIISIREAL-------KESD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  +L  HYR P+ ++ + L    + L ++        +++             A+
Sbjct: 285 VEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAM 344

Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------EVCKEH 400
            +D NT  A   L ++ RE  +  D         L        +I G+      +  +  
Sbjct: 345 DDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +     I+KL+ +R      K + +AD IR QL   G  +ED  +       T W+Q+
Sbjct: 405 KKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSD------GTSWRQE 458


>gi|269140042|ref|YP_003296743.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267985703|gb|ACY85532.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304559869|gb|ADM42533.1| Cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 461

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 256/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +        ++   +T +   +  +D   L    P  +PR
Sbjct: 60  RLKYVRNVTDVDDKIIKRALENK------ESCEQLTERMLAEMHRDFDALNIARPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I   HAY A N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDGA-YVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +               +         +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDAAAQPAADETFTARFRAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHL---- 401
           + +D NT  A   L  +ARE  +           L       AH+LG +E   EH     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKGEDMAQASALAAQMRGLAHVLGLLEQTPEHFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                +    IE L+++R      K ++ AD  R  L + G +LED      G + T W+
Sbjct: 406 AAAGDDEVAQIEALIKQRNDARAAKAWALADEARDSLNAMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|209964298|ref|YP_002297213.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
 gi|226710848|sp|B6ISG4|SYC_RHOCS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|209957764|gb|ACI98400.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
          Length = 456

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 217/474 (45%), Positives = 285/474 (60%), Gaps = 40/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R    F  IDPSN+R+YVCGPTVYD+AH+GNAR    FD+L RLL++ Y   
Sbjct: 3   LTLYNTLTRSEEAFTPIDPSNVRLYVCGPTVYDYAHVGNARTFSAFDLLARLLKHLY--P 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITD+DDKII+R+++        + I  +T++ T QF  D   L  L P  +PR
Sbjct: 61  RVTYARNITDVDDKIIDRSQRS------GEPIDGVTARTTAQFHADMDALGLLRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIPQMI +I  ++  G AY A   ++F   ++P+YG  SRR  DE   G RV    +
Sbjct: 115 ATTHIPQMIAMIGRLVEQGFAYAAEGHVLFHVPAMPDYGRLSRRSQDELIAGARVEVAPY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF+LWK + P EPGW+SPWG GRPGWHIECSAM++ +LG VFDIHGGGLDLIFPH
Sbjct: 175 KRSPADFVLWKPAKPGEPGWDSPWGTGRPGWHIECSAMTAAHLGAVFDIHGGGLDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN+W+H+GFL + G KMSKS GNF T+ ELL+        +P 
Sbjct: 235 HENEIAQSRCAHGTAVMANVWMHSGFLTIAGDKMSKSLGNFYTVRELLD-------EFPG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSALYNDL 359
             IRLA+L  HYR+P+DFT +++ +A+  L +W         +  A     VL+AL +DL
Sbjct: 288 EAIRLALLSAHYRQPLDFTKEKIAQAKQALDRWYGVLRGLEEVRAAEVPFDVLAALEDDL 347

Query: 360 NTVSAIQALHKLAR-----ESTKNHDLLPIFNASAHILGIEVCK---------EHLNKNI 405
           NT  AI  LH+LA      ++     L     A+A +LG              +  +   
Sbjct: 348 NTPLAISHLHELATAFHKADAAARPGLAGRLKAAAGLLGFLRQDPDAWFRGTPKGTDGLD 407

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             AIE  +Q R    K K F+ AD IR  L  +G +LED      G + T WK+
Sbjct: 408 EAAIEAAIQARKEARKAKDFAEADRIRAALLEQGIVLED------GPQGTSWKR 455


>gi|86750485|ref|YP_486981.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|109894930|sp|Q2IUP0|SYC_RHOP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86573513|gb|ABD08070.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 493

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 223/490 (45%), Positives = 300/490 (61%), Gaps = 38/490 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL ++   F  IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YGE 
Sbjct: 3   LRLYDTLTKEKRAFAPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGEN 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI +RA +++P +P+N+AI  +T +  +QF  D   L CL PT +PR
Sbjct: 63  HVTYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKMGT 177
           AT HI +M  +I  ++  G AY A + ++F  +++       P YG+ + R +DE   G 
Sbjct: 123 ATEHIGEMRTIIDRLVAGGFAYVAADHVLFSPAAMNAANSVLPRYGALANRSLDEMIAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIH 234
           RV    +K++  DF+LWK S P EP W SP G    GRPGWHIECSAMS  +LG+ FDIH
Sbjct: 183 RVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGITMEGRPGWHIECSAMSWKHLGETFDIH 242

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL+FPHHENE+AQSCCA + ++ A  W+HNGFL +EG KMSKS GNFITI ELL T
Sbjct: 243 GGGIDLVFPHHENEVAQSCCAFQTDRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELLAT 302

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---AV 351
           +KFGG SW   ++R AM+ THYR PID+TV+ L E   +L  W +     G         
Sbjct: 303 EKFGGDSWVGEILRFAMIKTHYRSPIDWTVKALDEGHKVLWDWYRDIGDVGPAQQLPGEF 362

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-----HILG-------IEVCKE 399
           +  L +DLN  SAI  +H L ++  K  +LL   N         +L        I +   
Sbjct: 363 IDCLADDLNISSAIAFMHSLRKDK-KFAELLATMNFLGFSNAESVLARRPVGVRINLPPA 421

Query: 400 HLNKNIS-----------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           H    +              IE+ +  R      K F  +D IR +L + G  ++D K+ 
Sbjct: 422 HAEAAVGTVEVLAKPLSKSEIEERIDARTAARARKDFKESDRIRDELAAMGIAIKDGKDA 481

Query: 449 DNGQRMTRWK 458
           D G+ +T W+
Sbjct: 482 D-GKPVTTWE 490


>gi|197263729|ref|ZP_03163803.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|197241984|gb|EDY24604.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
          Length = 461

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/482 (36%), Positives = 259/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWSSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +         + +       + +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W+
Sbjct: 406 AQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLAEMGIILED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|70727478|ref|YP_254394.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|109894948|sp|Q4L3I9|SYC_STAHJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68448204|dbj|BAE05788.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 466

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 170/481 (35%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  +  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPDIADRYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMDEIIDFIKELVDEGYAYESDGDVYFRTRKFEGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ +  A+  L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVNAAKSGLERIRNSYQLIEERETIATDIVDQSKYIEQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNA----SAHILG 393
             I     + + +D NT +A+ A + L++       E+  +  ++  F       + +LG
Sbjct: 346 DAIIEQFETVMDDDFNTANAVTAWYDLSKLANKYVLENNTSTQVISRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +     +  +   IEKL++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLKGNKSDMLLDEDIEKLIEERNEARKNKDFARADEIRDMLKEQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 470

 Score =  565 bits (1457), Expect = e-159,   Method: Composition-based stats.
 Identities = 181/476 (38%), Positives = 257/476 (53%), Gaps = 43/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K YN+L R+   F  I    + MYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 16  LKFYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA++        ++I  +TS+      +D  RL  + P  +P+
Sbjct: 75  -VTYVRNITDIDDKIIKRAQEN------GESIQALTSRFITAMDEDAARLGVMRPDLEPK 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  M+ +I  +I  G AY A+  ++ +  SS   YG  S + +++ + G RV    
Sbjct: 128 ATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEIDQ 187

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM + +LG  FDIHGGG DL FP
Sbjct: 188 YKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQFP 247

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+HNGF+ ++  KMSKS GNF TI ++LE        + 
Sbjct: 248 HHENEIAQSEAANGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLE-------KYD 299

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVLS 353
           A V+R  +L   YR P++++   L +A   L++         +                +
Sbjct: 300 AEVVRFFILRAQYRSPLNYSDHHLDDARQALTRLYTALRGLALPTFTIDWQQPQAARFKA 359

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG----------IEVCKEHLNK 403
           A+ +D NT  A   L +LA E  +   L       A                   E    
Sbjct: 360 AMDDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESAQG 419

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +  IE+ +Q RL   + K F+ AD IRKQL  +G +LED        + T W++
Sbjct: 420 RSADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDS------PQGTSWRR 469


>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 484

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 181/503 (35%), Positives = 259/503 (51%), Gaps = 69/503 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YN+  RK   F+ ++   + +YVCG TVYD  HIG+AR  IVFDVL R  R    
Sbjct: 1   MPLKLYNSSIRKKEVFKPLNDGKVGLYVCGVTVYDLCHIGHARSTIVFDVLARYFRARGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN TDIDDKIIERA+       +  A   +  +    F +D  +L  L    +
Sbjct: 61  D--VTYVRNFTDIDDKIIERAKL------LKKAPKELAREFIDAFYEDMGKLGVLKADVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+++  MI + Q ++  G+AY    ++ F   S P YGS S R +++ + G+RV   
Sbjct: 113 PRATDYVEDMIEMTQTLMDRGYAYTEGGDVYFSVDSYPGYGSLSGRNLEDMRAGSRVAVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK + P EP W SPWG GRPGWH+ECS MS+ +LG  FDIHGGG DL+F
Sbjct: 173 DRKRHPMDFVLWKSAKPGEPQWPSPWGPGRPGWHLECSVMSNRHLGPTFDIHGGGRDLLF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS CA+  E  A  W+HNGF+ +E  KMSKS GNF+TI + L       + +
Sbjct: 233 PHHENERAQSMCANDGE-FARYWVHNGFVTVESEKMSKSLGNFLTIRDAL-------KKY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------------TS 341
              V+RL +L  HYR P+DF+ + +   +  L +  +                      S
Sbjct: 285 HPEVLRLFLLSKHYRSPLDFSAKDVANLQSGLVRIYRMLQRLNDLLGPGDGEKTSEDSLS 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------------LLPI 384
            + G         + +DLNT  A+  +    RE  +  D                     
Sbjct: 345 GASGEFYEKFCEMMDDDLNTAGALGLVFDKVREMNRLMDPDGNGAVSEKALSSLKSQRDQ 404

Query: 385 FNASAHILGI------EVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
              +  ILG+      E  ++  + +  +    IE LV++R      K ++ +D IR QL
Sbjct: 405 LLRAGEILGLFQQNPAEFFEQLASPSKDVNTDEIEALVKKRSQARVAKDWALSDTIRDQL 464

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
           +  G +LED      G + T W+
Sbjct: 465 KEMGVVLED------GPQGTTWR 481


>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|109894926|sp|Q1QC19|SYC_PSYCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 488

 Score =  565 bits (1456), Expect = e-159,   Method: Composition-based stats.
 Identities = 186/498 (37%), Positives = 262/498 (52%), Gaps = 63/498 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ IY++L  +   F+ +    + MYVCG TVYD+ HIG+AR M+ FD+  R L     
Sbjct: 12  SQLVIYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGY 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YVRNITDIDDKII RA +        + I  +T +      +D T L CL+P  +
Sbjct: 72  D--VNYVRNITDIDDKIITRAAEN------GEEIGTLTQRFITAMHEDATALGCLSPDAE 123

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+HI +M  +I+ ++ + +AY  +  ++ +   S  +YG  S+R +D+ + G+RV  
Sbjct: 124 PRATDHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K+NP DF+LWK + P EP W S WG+GRPGWHIECSAMS+  LG  FDIHGGG DL 
Sbjct: 184 ENDKRNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQ 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   E  A  W+H GF+N++G KMSKS GNF TI +++         
Sbjct: 244 FPHHENEIAQSEAATGCE-YARNWMHVGFINVDGEKMSKSLGNFFTIRDVMA-------K 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPA---- 350
           +    +R  +L +HYR  ++F+   L E+   LS+  Q             IID A    
Sbjct: 296 YLPETVRFFLLSSHYRSQVNFSDSALDESHNSLSRLYQALKVAEQQKGKVLIIDEALINN 355

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHIL 392
                     + A+ +D N+ +AI  L  LAR+  K            L     A A  L
Sbjct: 356 AYASAVGQDFIKAMNDDFNSSTAISVLFGLARDINKASKAQDVETAWQLAQHLKALAQTL 415

Query: 393 GI--EVCKEHLNKNI---------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            I  +  ++ L   I           AI+ L+ ER      K F+ AD IR QL+  G  
Sbjct: 416 NILQQPVQQFLQAVIGEVAEDSLTDEAIDGLIIERADAKTNKNFARADEIRVQLKEAGIE 475

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           LED +        T W++
Sbjct: 476 LEDSRA------GTTWRR 487


>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|109894925|sp|Q4FRZ9|SYC_PSYA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 488

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 181/498 (36%), Positives = 259/498 (52%), Gaps = 63/498 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ IY++L  +   F+ +    + MYVCG TVYD+ HIG+AR M+ FD+  R L     
Sbjct: 12  SQLVIYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLGY 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YVRNITDIDDKII RA +        + I  +T +      +D T L C +P  +
Sbjct: 72  D--VNYVRNITDIDDKIIARAAEN------GEEIGALTQRFITAMHEDATALGCQSPNAE 123

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT++I +M  +I+ ++ + +AY  +  ++ +   S  +YG  S+R +D+ + G+RV  
Sbjct: 124 PRATDYIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVEV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K+NP DF+LWK + P EP W S WG+GRPGWHIECSAMS+  LG  FDIHGGG DL 
Sbjct: 184 ENDKRNPFDFVLWKAAKPDEPQWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDLQ 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   E  A  W+H GF+N++G KMSKS GNF TI +++         
Sbjct: 244 FPHHENEIAQSEAATGCE-YARNWMHVGFINVDGEKMSKSLGNFFTIRDVMA-------K 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------SKGIIDP 349
           +    +R  +L +HYR  ++F+   L EA   LS+  Q                  +I+ 
Sbjct: 296 YLPETVRFFLLSSHYRSQVNFSDSALDEAHNSLSRLYQALKVVEQQKGQTLIVDDALINN 355

Query: 350 A--------VLSALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHIL 392
           A         + A+ +D N+ +AI  L  LAR+  K            L     A A  L
Sbjct: 356 AYASAPGQDFIKAMNDDFNSSTAISVLFGLARDINKASKVEDIESAWQLAQQLKALAQTL 415

Query: 393 GIE-----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            I            + +   +     AI+ L+ ER      K F+ AD IR QL+  G  
Sbjct: 416 NILQQPVQQFLQAVIGEAAEDGLTDEAIDSLIIERADAKTNKNFARADEIRIQLKDAGIE 475

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           LED +        T W++
Sbjct: 476 LEDSRA------GTTWRR 487


>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|123134207|sp|Q0KCA9|SYC_RALEH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 462

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 181/479 (37%), Positives = 252/479 (52%), Gaps = 45/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    E 
Sbjct: 4   LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYE- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+NITDIDDKII RA +        + I  +T++  Q   +D   L  + P H+PR
Sbjct: 63  -VTYVQNITDIDDKIIRRAAEN------GETIGELTTRFIQYMHEDAAALGVIRPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ +I  +   G AY+A + ++ +       YG  S + +++ + G RV    
Sbjct: 116 ATDYVPQMLDMIGKLEAKGLAYQASDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVSAND 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W+S WG GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +   N+W+HNGF+ +   KMSKS GNF TI E+L       +
Sbjct: 236 QFPHHENEIAQSEGASG-KPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVL-------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
           S+ A V+R  +L  HYR P++++   L +A   L++                        
Sbjct: 288 SYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCAVDWDEPHARR 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEHL------- 401
              A+ +D NT  A+  L  LA E  +             A  LG+     H        
Sbjct: 348 FAEAMGDDFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQGGRS 407

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +      IE L+  R      + F+ AD IR QL   G +LED          T W++
Sbjct: 408 DDGISPEQIETLIAARKTAKVERNFAEADRIRAQLLEAGIVLEDKPGGA-----TEWRR 461


>gi|296333091|ref|ZP_06875545.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672793|ref|YP_003864464.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296149707|gb|EFG90602.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411036|gb|ADM36154.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 466

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 163/489 (33%), Positives = 254/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   
Sbjct: 1   MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I+ +  + + +D   L C      
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPAISERFIKAYFEDVGALGCRKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR   ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+   
Sbjct: 113 PRVMENMDAIIDFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              ++R  ML  HYR PI+++ + L   +   ++     ++                   
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDL-------LPIFNASAH 390
                   A   A+ +D NT +AI  L  LA+ +     K+H         + +F+    
Sbjct: 345 EKVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED      
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|110633319|ref|YP_673527.1| cysteinyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284303|gb|ABG62362.1| cysteinyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 506

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 248/491 (50%), Positives = 322/491 (65%), Gaps = 33/491 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+YNTL R+  EF  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG
Sbjct: 15  KALKLYNTLTRRDEEFVPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRQLYG 74

Query: 63  EKCVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +  VTYVRNITD+DDKI  RA            + +N+AI  +T +   QF  D   L C
Sbjct: 75  DDHVTYVRNITDVDDKINARALRDFGEDITAGRLTLNEAIRRVTERTAAQFHADVAALGC 134

Query: 117 LAPTHQPRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           LAPTH+PRAT  +         M  LIQ +I  GHAY A  EI+FDT+S+P+YG  S+R+
Sbjct: 135 LAPTHEPRATEFVLPRTDGKADMASLIQTLIDRGHAYAAKGEILFDTASMPDYGQLSKRR 194

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSA 221
           +++Q+ G RV    HK+NP+DF+LWK S+  EPGWE  +         RGRPGWHIECSA
Sbjct: 195 LEDQQAGARVAVDPHKRNPSDFVLWKESSAEEPGWEGRFTFEGKPLVIRGRPGWHIECSA 254

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS+ YLG+VFDIHGGGLDLIFPHHENEIAQS CA      AN W+HNGF+ +EG+KM+KS
Sbjct: 255 MSAAYLGEVFDIHGGGLDLIFPHHENEIAQSRCAHGTPVMANYWLHNGFVQVEGKKMAKS 314

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+TI++LL T+ FGGR WP  V+RLA+LMTHYREP+DF++++L EAE +L  W +  
Sbjct: 315 EGNFVTIHDLLATENFGGRKWPGEVLRLAILMTHYREPLDFSLRKLEEAEAVLDGWYRVV 374

Query: 342 TSKGIID---PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVC 397
                 +    AV  AL +DL T +AI  LH L  ++ +  +       A+A +LG+   
Sbjct: 375 GDAKHQEGDSGAVRRALLDDLGTPAAITVLHDLRAQAARGSEAAKADLKANAVLLGLLTQ 434

Query: 398 --------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                   K         A+E+ V  RL LL+ K F  AD IR++L  +G  L DYK+P+
Sbjct: 435 SQDQWFSGKAADAAIDEAAVEERVAARLSLLRAKNFPEADRIREELSGRGIQLMDYKDPE 494

Query: 450 NGQRMTRWKQK 460
            G+R T+W+ K
Sbjct: 495 TGERRTKWEVK 505


>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 465

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 178/484 (36%), Positives = 256/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  E--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIAALHEDADALGIARPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKRS   EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
              + A V+R  +   HYR P++++   + +A   L +     T       A        
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRLYTALTDVAPDGAALDWNEAHA 345

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------VCKEH 400
               +A+ +D NT  A+  L +LA E  +  D  L     +   +LG+         ++ 
Sbjct: 346 QRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQQA 405

Query: 401 LNKNIS-----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
               +       AIE  + ER    + K +++AD IR +L   G  LED         +T
Sbjct: 406 AGAAVEGALEPAAIEAKIAERAAAKQAKDYAAADRIRAELLEAGVALEDKPGG-----LT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|145633713|ref|ZP_01789439.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|144985473|gb|EDJ92294.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
          Length = 459

 Score =  564 bits (1455), Expect = e-159,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 260/480 (54%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   E  W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENELSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI------EVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      +  +  
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + +    IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 406 SDDDEVAKIEALIKQRNEARAAKDWAAADAARNELTAMGIVLED------GANGTTWRKQ 459


>gi|314932753|ref|ZP_07840122.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654434|gb|EFS18187.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
          Length = 466

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  M+  HYR PI++ ++ +  A   L +   +       +                
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYIDQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                   + + +D NT +A+ A + LA+ + K            H    ++   + +LG
Sbjct: 346 ETILRQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLHRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  E+ N+ +   IEKL++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLKGENENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|229828827|ref|ZP_04454896.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
           14600]
 gi|229791990|gb|EEP28104.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
           14600]
          Length = 468

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 174/485 (35%), Positives = 259/485 (53%), Gaps = 54/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF  I+P  ++MYVCGPTVY++ HIGNARPMIVFD   R + Y   + 
Sbjct: 1   MRIFNTLTRRKEEFVPIEPGKVKMYVCGPTVYNYIHIGNARPMIVFDTFRRYMEYRGYQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII++A++E          S I+ +   +  KD   L     +  PR
Sbjct: 60  -VTYVSNFTDVDDKIIKKAKEE------GKDASEISERYIAECQKDMEALNVRPASVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I +M++++ ++I  G+AY   +  + + T +  +YG  S + I++ + G R  +  
Sbjct: 113 ATREIGEMVHMVSDLIDKGYAYPVEDGTVYYKTRAFHSYGKLSHKNIEDLEGGHRDIKVT 172

Query: 184 H--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK     EP W+SPW +GRPGWHIECS MS  YLG   DIH GG DLI
Sbjct: 173 GELKRDPLDFVLWKPKKEGEPYWDSPWCQGRPGWHIECSCMSKRYLGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+ +E  A  W+HNGFLN++ RKMSKS GNF T+ E+        + 
Sbjct: 233 FPHHENEIAQSEAANGVE-FARYWMHNGFLNIDHRKMSKSLGNFFTVREVC-------QK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
           +   V+R  ML  HYR P++F+   +  A++ L +                         
Sbjct: 285 YSGQVLRFFMLSAHYRSPLNFSADLMEAAKVSLERILTAGENLRFLAENARIDRMSEEER 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIF----NAS 388
           +              A+ +D NT  A+ A+ +L +          + +L   F    +  
Sbjct: 345 KILADSDQYMDKFNGAMDDDCNTADALAAIFELVKFINSRAAGQISRELADQFYQRLDTL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             + G+ + ++    N+   I+ L++ER    + K F+ AD IR  L ++G +LED +  
Sbjct: 405 TQVCGLILDQKE--DNLDAEIDSLIEERQEARRQKDFARADRIRDDLLARGIVLEDTREG 462

Query: 449 DNGQR 453
               R
Sbjct: 463 VKWHR 467


>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 482

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 168/503 (33%), Positives = 257/503 (51%), Gaps = 65/503 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M +++ +YNTL RK   F+ + P  ++MYVCG T Y+ +H+GNARP + +DV+ R L++ 
Sbjct: 1   MMRELTVYNTLSRKKEAFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VT+++N TD+DDKII  A  E        +   I ++    + +   +L      
Sbjct: 61  GY--AVTHIQNFTDVDDKIINAANGEEV------SWDTIANRYIASYFEVMDKLHIQRAD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PR + H+  +I +I  +I +GHAYE + ++ +   S  +YG  S R +D+   G R+ 
Sbjct: 113 KYPRVSEHMDDIIAMISKLIENGHAYELDGDVYYRVQSFEHYGELSHRSLDDMMAGARIE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+ FD HGGG DL
Sbjct: 173 VDDRKENPMDFALWKAAKPSEPSWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ+          N W+HNGF+ ++  KMSKS  NF  + ++LE       
Sbjct: 233 IFPHHENEIAQTEACCNHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLE------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDP 349
            +    +R  ++  HYR P+DF+ +RLTE    L +             Q S  K  +  
Sbjct: 286 HYSPDALRYFLISNHYRSPLDFSDERLTEMTRSLERLGTAIDNTLWLLEQPSGGKSELSA 345

Query: 350 A-----------VLSALYNDLNTVSAIQALHKLARESTKN----------------HDLL 382
           A             +A+ +D NT  A  A+ +LA++                     ++ 
Sbjct: 346 ALLADAQRTMEDFETAMCDDFNTALASAAMFELAKKVNIYTSEVSTNGVPADSAVLSEVK 405

Query: 383 PIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
            IF     ILG+   +      +  +K+ +  ++ +++ R      K+++ AD IR +L 
Sbjct: 406 RIFKTMTDILGVLEDRWNGTAGKADDKDYAALMDVILELRQECRAQKQYALADAIRDKLS 465

Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
             G  +ED        +  RWK+
Sbjct: 466 DLGITIEDS------PQGARWKK 482


>gi|153813240|ref|ZP_01965908.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
 gi|149830653|gb|EDM85744.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
          Length = 469

 Score =  564 bits (1454), Expect = e-158,   Method: Composition-based stats.
 Identities = 173/492 (35%), Positives = 250/492 (50%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+  EF  ++   +RMYVCGPTVY+  HIGNARPMI+FD + R L Y   + 
Sbjct: 1   MKLFNTMSRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        +   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVSAEEISQRYIAECKKDMAGMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI +IQ +I   +AY  A+  + F       YG  S + +D+ + G R   V 
Sbjct: 113 ATQEIDGMIDMIQTLIDKEYAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP W+SPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPFWKSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS C + +   A  W+HN FLN++ RKMSKS GNF T+ E+       G 
Sbjct: 233 VFPHHENEIAQSECCNGV-PFAKYWMHNAFLNIDNRKMSKSLGNFRTVREI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------ 342
            +   V+R  ML  HYR P++F+   +  ++  L +  + +                   
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMESSKNALERITEAAARLRDRQAAATVQEATEDE 344

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
                 +         ++ +D NT  A+ A+ +L + +  N             L +   
Sbjct: 345 KKLMQEEAAFVTKFEESMDDDFNTADALAAVFELVKFANTNVQEGSSKEFAGHTLEVMTK 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LG+ + K+   + +   IE L+ ER    K K F+ AD IR  L  KG  L+D + 
Sbjct: 405 LCDVLGLTLEKKE--EILDEEIENLIAERQAARKAKDFARADEIRGLLLDKGIELKDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|73663535|ref|YP_302316.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|109894949|sp|Q49V39|SYC_STAS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72496050|dbj|BAE19371.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 466

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 166/481 (34%), Positives = 262/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+R+++      +++++  I  +    F +D   L     T  PR
Sbjct: 61  -VVFVSNFTDVDDKLIKRSKE------LDESVETIADRYIDAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+  +I  I++++  G+AYE+  ++ F T    +YG  S + +++ K+G R+ +   
Sbjct: 114 VMNHMDDIINFIKDLVDEGYAYESGGDVYFRTRKFQDYGKLSHQSLNDLKVGARIEQGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKQAKPGEISWESPFGEGRPGWHIECSVMAYHELGATIDIHAGGTDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNF+ +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFVLVHDII-------KQIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
            V+R  M+  HYR PI++ ++ +  A+  L +   +  +    +                
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVEAAKSGLERVRNSYQAIEEREAIATDIEAQSDYIAEI 345

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
                   + + +D NT +AI A + LA+ + K       +  +L  F       + +LG
Sbjct: 346 DKILEQFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTKVLGRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  ++ +   +E L++ER    K K F+ AD IR QL+ +  ILED       +R
Sbjct: 406 VPLKGKDSDELLDEEVEALIEERNNARKDKDFARADEIRDQLKEQNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|197286005|ref|YP_002151877.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227356519|ref|ZP_03840906.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|229470558|sp|B4F1M6|SYC_PROMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|194683492|emb|CAR44297.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|227163275|gb|EEI48202.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 463

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 259/482 (53%), Gaps = 49/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    I MYVCG T+YD  HIG+ R  + FD + R LRY   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHKGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L  L P  +PR
Sbjct: 61  -VNYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALTETLIKRGHAYVAENGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVAN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNGKELGHHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSA 354
           A  +R  +L  HYR  +++T + L +A   L +                    +   + A
Sbjct: 286 AETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDANAQPAGGEAFEAQFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  LARE  +         + L  +    A +LG+   +        
Sbjct: 346 MNDDFNTPEAYSVLFDLAREVNRLKTVNMEAANGLAAVLRKLAKVLGLLEQQPEHFLQSG 405

Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +  + +    IE L+Q+R    K K +++AD  R  L + G +LED      G + T W
Sbjct: 406 AQADDADEVEKIEALIQQRNDARKNKDWAAADAARDALTAMGIVLED------GPQGTTW 459

Query: 458 KQ 459
           ++
Sbjct: 460 RR 461


>gi|52424677|ref|YP_087814.1| cysteinyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|52306729|gb|AAU37229.1| CysS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 476

 Score =  564 bits (1453), Expect = e-158,   Method: Composition-based stats.
 Identities = 184/481 (38%), Positives = 259/481 (53%), Gaps = 45/481 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +KI+NTL R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY  
Sbjct: 17  PSMLKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLG 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  
Sbjct: 77  YD--LRYVRNITDVDDKIIKRA------LENNETCDQLVERMIAEMHKDFDALNILRPDV 128

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT HIP++I +++ +I  GHAY A + +++FD  S   YG+ SR+ +++ + G RV 
Sbjct: 129 EPRATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVE 188

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K  KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+   LG  FDIHGGG DL
Sbjct: 189 IKSVKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDL 248

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA   E   N W+H G L +   KMSKS  NF TI ++L        
Sbjct: 249 MFPHHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILT------- 300

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVL 352
            + A  +R   L   YR  +D++ + +  A   L +          ++            
Sbjct: 301 KYDAESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCETVEIPAEDQYVIDFK 360

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A+  L +LARE          K + L       A +LG+         +
Sbjct: 361 TAMDDDFNTPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQ 420

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE L++ R      K +++AD  R +L + G +LED      G + T W+
Sbjct: 421 GDAADAEVSKIEALIKRRNEARAAKDWAAADAARNELTAMGVVLED------GAKGTTWR 474

Query: 459 Q 459
           +
Sbjct: 475 K 475


>gi|311070741|ref|YP_003975664.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871258|gb|ADP34733.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 466

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 166/489 (33%), Positives = 262/489 (53%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   
Sbjct: 1   MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I  A +      + + +  I+ +  + + +D   L C      
Sbjct: 61  D--VQYVSNFTDVDDKLIRAADE------LGEDVPTISERFIKAYFEDVGALGCKKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  +Q +I  G+AYE++ ++ F T +   YG  S++ IDE + G R+   
Sbjct: 113 PRVTENMDAIIDFVQELIKKGYAYESDGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W++PWG+GRPGWHIECSAM   YLG+  DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKDGEISWDAPWGKGRPGWHIECSAMVKKYLGEQIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKH 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDP--- 349
              ++R  ML  HYR PI+++ + L   +   ++             +ST+    D    
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKNAFNRLKTAYSNLLHRLNSSTNLTADDDEWL 344

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L +LA+ +              +  + +F+  A 
Sbjct: 345 KKIEEHRTAFEEAMDDDFNTANAISILFELAKHANYYLQEDNTADKVINAFIEMFDRIAS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + ++ L   +   +E+L+++R    + + F+ +D IR QL+S   ILED      
Sbjct: 405 VLGLTMGEQEL---LDQDVEELIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|289450440|ref|YP_003475062.1| cysteine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
 gi|289184987|gb|ADC91412.1| cysteine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
          Length = 473

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 178/484 (36%), Positives = 254/484 (52%), Gaps = 59/484 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++++L  +  EF  ++P  ++MY CGPTVY++ H+GNARP +VFD+L R L Y   + 
Sbjct: 1   MQLFDSLTNQKREFIPLEPGKVKMYSCGPTVYNYFHLGNARPFVVFDLLRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDK+I RA +E         +  +  K   ++ KD   L     T QPR
Sbjct: 60  -VTFVQNFTDIDDKMIRRANEE------GVTLRELADKYIAEYFKDADGLGIKRATIQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
           AT  I  +I  +  ++  GHAY + + + F T S P+YG  S   +DE + G   RV   
Sbjct: 113 ATESIDAIIEQVGKLVAGGHAYVSTDGVYFSTRSFPDYGKLSHFHLDELEAGASERVNTG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K +PADF +WK   P EP W SPWG GRPGWHIECS+M + YLG   DIH GG DLIF
Sbjct: 173 ENKHDPADFAVWKFKKPGEPAWPSPWGEGRPGWHIECSSMINRYLGPTIDIHSGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   ++ A+ W+HNGF+N+   KMSKS GNF T+ +++       + +
Sbjct: 233 PHHENEIAQSECATG-KQLAHYWLHNGFINVNNEKMSKSLGNFFTVRDVV-------KHF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------------- 339
           P  VIR  +L  HYR PI+F+ + L  A+  L++                          
Sbjct: 285 PYDVIRFFLLTGHYRSPINFSDELLQAAQTGLTRLRNCYSAVQFKLKSKAESAESADKAA 344

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
                   S      A ++A+ +DLNT  A+ A+    RE                +L  
Sbjct: 345 AAAESVRKSIDTARAAFIAAMDDDLNTPDALAAIFSWVREVNTLITSSPSAADCQAVLDF 404

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    +LG+   +    + I   I  LV+ R    K K F+ AD +RKQ+   G+ L D
Sbjct: 405 FDELGDVLGL---RWQCEEAIPTEILALVEARTQAKKAKNFTLADELRKQITEAGYTLMD 461

Query: 445 YKNP 448
               
Sbjct: 462 TPQG 465


>gi|160937871|ref|ZP_02085229.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439097|gb|EDP16851.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
           BAA-613]
          Length = 469

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 183/492 (37%), Positives = 258/492 (52%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL RK  EF  + P  ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRKKEEFVPLTPGEVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            ++ +  ++  KD   +     T  P+
Sbjct: 60  -VRYVSNFTDVDDKIIKKAIEE------GVDADTVSRRYIEECKKDMAAMNVKPATVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +IQ +I   HAY A +  + F T S   YG  S + +DE + G R   V 
Sbjct: 113 ATQEICGMLEMIQTLIDKNHAYVAGDGTVYFRTGSFKEYGKLSHKNLDELQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEGKEDPNDFVLWKPKKEGEPFWESPWCDGRPGWHIECSVMSKRYLGEQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSECAN-DKNFATYWMHNAFLNIDNKKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTSTS 343
            +   V+R  ML  HYR P++F+   +  ++  L +                   +T+  
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTCVEKLRDLEAKASDSSKTAGE 344

Query: 344 KGIIDPA------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
           +  ++ A         A+ +D NT  AI A+ +L + +    D          +  +   
Sbjct: 345 QATMEEADKLRGKYEEAMDDDFNTADAISAIFELVKLANTTADESGTREFVSYMKTMIEE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI    E   + +   IE++++ R    K K F+ AD IR +L   G +LED + 
Sbjct: 405 LCDVLGI--ITEKKEEVLDSEIEEMIEARQQARKDKNFALADEIRGKLLDMGIVLEDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|23097554|ref|NP_691020.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|30316161|sp|Q8ETZ9|SYC_OCEIH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|22775777|dbj|BAC12055.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 468

 Score =  563 bits (1452), Expect = e-158,   Method: Composition-based stats.
 Identities = 174/489 (35%), Positives = 252/489 (51%), Gaps = 55/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYNTL R+   F+ ++   ++MYVCGPTVY++ HIGNARP IVFD + R L Y   
Sbjct: 1   MTIQIYNTLTRQKEIFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYRGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDKII+ A+       + + + ++  +    +++D   L     T  
Sbjct: 61  D--VDYVLNFTDVDDKIIKTAKD------VGEEVPVLADRFVNAYLEDVGALGVKKATKN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  + +  +I  I  +I  G+AYEA+ ++ F   S   YG  S + IDE + G R+   
Sbjct: 113 PRVMDTMDDIIAFISALIEKGYAYEADGDVYFKPRSFDTYGKLSHQSIDELRSGARIQVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK++   E  W+SPWG GRPGWHIECSAM   +LG   DIH GG DL F
Sbjct: 173 EKKEDPLDFALWKQAKDDEIAWKSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +  E  AN W+HNG++N++  KMSKS GNF+   +L++         
Sbjct: 233 PHHENEIAQSEAMNG-ETFANYWMHNGYINIDNEKMSKSLGNFVLARDLIQAH------- 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI+FT   L  A+  L +      +                   
Sbjct: 285 DPRVLRFFMLSVHYRNPINFTEALLESAKTSLERIQTAYHNLSHRRDSSLNLTNDDAKWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFN----ASAH 390
                        + +D NT +AI  L  L++E+         + +++  F         
Sbjct: 345 QLVSAAMSKFEQDMDDDFNTANAISVLFDLSKEANVYLQENQTSTEVIDAFQDAISQILT 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI + ++     +   IE L++ER    K + F+ AD IR  L+ KG +LED      
Sbjct: 405 VLGINILEDE-ETLLDETIEALIKERNEARKNRNFARADEIRDMLKEKGIVLEDT----- 458

Query: 451 GQRMTRWKQ 459
             +  RWK+
Sbjct: 459 -PQGVRWKR 466


>gi|73540824|ref|YP_295344.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|109894927|sp|Q473D3|SYC_RALEJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72118237|gb|AAZ60500.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 462

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 178/479 (37%), Positives = 252/479 (52%), Gaps = 45/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    + 
Sbjct: 4   LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+NITDIDDKII RA +        + I  +T++  Q   +D   L  + P H+PR
Sbjct: 63  -VTFVQNITDIDDKIIRRAAEN------GETIGQLTTRFIQYMHEDADALGIVRPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ LI  +  +G AY+A + ++ +       YG  S + +++ + G RV    
Sbjct: 116 ATDYVPQMLDLIGKLEANGLAYQATDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVTAND 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W S WG GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKESEPPESKWNSKWGMGRPGWHIECSAMSCTLLGEHFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +   N+W+HNGF+ +   KMSKS GNF TI E+L       +
Sbjct: 236 QFPHHENEIAQSEGASG-KPFVNVWMHNGFVRVNDEKMSKSLGNFFTIREVL-------K 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
            + A V+R  +L  HYR P++++   L +A   L++                 +      
Sbjct: 288 EYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDTQPGGYAVDWEEAHAKR 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL------- 401
              A+ +D NT  A+  L  LA E  +             A  LG+     H        
Sbjct: 348 FAEAMCDDFNTPIAVSVLFDLASEVNRTGSSVAARQLKGLAGTLGLLERDPHTFLQGGKK 407

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +      IE L+  R      + F+ AD IR  L + G +LED          T W++
Sbjct: 408 VDGPSPDEIEGLIAARKTAKAERNFAEADRIRADLLAAGIVLEDKPGGA-----TEWRR 461


>gi|16077162|ref|NP_387975.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307906|ref|ZP_03589753.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312227|ref|ZP_03594032.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317161|ref|ZP_03598455.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321424|ref|ZP_03602718.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|549024|sp|Q06752|SYC_BACSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|289284|gb|AAA21798.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
 gi|467482|dbj|BAA05328.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
 gi|499303|emb|CAA52167.1| cysteine--tRNA ligase [Bacillus subtilis subsp. subtilis str. 168]
 gi|2632361|emb|CAB11870.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 466

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 163/489 (33%), Positives = 253/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL R+   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   
Sbjct: 1   MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I+ +  + + +D   L C      
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTISERFIKAYFEDVGALGCRKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR   ++  +I  +  ++  G+AYE+  ++ F T +   YG  S++ IDE + G R+   
Sbjct: 113 PRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              ++R  ML  HYR PI+++ + L   +   S+     ++                   
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFSRLKTAYSNLQHRLNSSTNLTEDDDQWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDL-------LPIFNASAH 390
                   A    + +D NT +AI  L  LA+ +     K+H         + +F+    
Sbjct: 345 EKVEEHRKAFEEEMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG  + ++ L   +   IE L+++R    + + F+ +D IR QL+S   ILED      
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|187631655|sp|Q11JR3|SYC_MESSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 497

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 248/491 (50%), Positives = 322/491 (65%), Gaps = 33/491 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+YNTL R+  EF  +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR  YG
Sbjct: 6   KALKLYNTLTRRDEEFVPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRQLYG 65

Query: 63  EKCVTYVRNITDIDDKIIERA------RQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +  VTYVRNITD+DDKI  RA            + +N+AI  +T +   QF  D   L C
Sbjct: 66  DDHVTYVRNITDVDDKINARALRDFGEDITAGRLTLNEAIRRVTERTAAQFHADVAALGC 125

Query: 117 LAPTHQPRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
           LAPTH+PRAT  +         M  LIQ +I  GHAY A  EI+FDT+S+P+YG  S+R+
Sbjct: 126 LAPTHEPRATEFVLPRTDGKADMASLIQTLIDRGHAYAAKGEILFDTASMPDYGQLSKRR 185

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSA 221
           +++Q+ G RV    HK+NP+DF+LWK S+  EPGWE  +         RGRPGWHIECSA
Sbjct: 186 LEDQQAGARVAVDPHKRNPSDFVLWKESSAEEPGWEGRFTFEGKPLVIRGRPGWHIECSA 245

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS+ YLG+VFDIHGGGLDLIFPHHENEIAQS CA      AN W+HNGF+ +EG+KM+KS
Sbjct: 246 MSAAYLGEVFDIHGGGLDLIFPHHENEIAQSRCAHGTPVMANYWLHNGFVQVEGKKMAKS 305

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+TI++LL T+ FGGR WP  V+RLA+LMTHYREP+DF++++L EAE +L  W +  
Sbjct: 306 EGNFVTIHDLLATENFGGRKWPGEVLRLAILMTHYREPLDFSLRKLEEAEAVLDGWYRVV 365

Query: 342 TSKGIID---PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVC 397
                 +    AV  AL +DL T +AI  LH L  ++ +  +       A+A +LG+   
Sbjct: 366 GDAKHQEGDSGAVRRALLDDLGTPAAITVLHDLRAQAARGSEAAKADLKANAVLLGLLTQ 425

Query: 398 --------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                   K         A+E+ V  RL LL+ K F  AD IR++L  +G  L DYK+P+
Sbjct: 426 SQDQWFSGKAADAAIDEAAVEERVAARLSLLRAKNFPEADRIREELSGRGIQLMDYKDPE 485

Query: 450 NGQRMTRWKQK 460
            G+R T+W+ K
Sbjct: 486 TGERRTKWEVK 496


>gi|209885639|ref|YP_002289496.1| cysteinyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|226710846|sp|B6JHT8|SYC_OLICO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|209873835|gb|ACI93631.1| cysteinyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 464

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 233/474 (49%), Positives = 302/474 (63%), Gaps = 31/474 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+Y+TL +    F  +DP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MDLKLYDTLTKDKRAFVPLDPRNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITD+DDKI +RA +++P +P+N+AI  +T K   QF  D   L CL PT +
Sbjct: 61  DSHVTYVRNITDVDDKINDRALRDYPGLPLNEAIRKVTEKTATQFRADVDALGCLQPTVE 120

Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT+ +         M+ LI+ +I  GHAYEAN E++FDT+S+P+YG  S RK++EQ+ 
Sbjct: 121 PRATDFVLPRPDGKTDMVSLIKTLIDRGHAYEANGEVLFDTASMPDYGQLSGRKLEEQQA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G R+    HKK+ ADF+LWK+S+  EPGW+SPWGRGRPGWHIECSAMS+ YLG+ FDIHG
Sbjct: 181 GARIAVDAHKKHAADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGETFDIHG 240

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDLIFPHHENEIAQS CA      AN W+HNGFL +EG KMSKS GNF+TINELL   
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHAMANYWLHNGFLQVEGEKMSKSLGNFVTINELL--- 297

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--VLS 353
               + WP  V+RL ML THYR PID+T++ L E+   L  W  T+       PA  V+ 
Sbjct: 298 ----QDWPGEVVRLNMLKTHYRSPIDWTLKGLEESAKALDDWYATAGDAAGSAPADTVME 353

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL-LPIFNASAHILGI--------EVCKEHLNKN 404
            L +DLNT   + ALH L  ++ K          AS   LG         +  K   +  
Sbjct: 354 TLCDDLNTAQTVAALHGLRHQAEKGDAAQRDQLAASLRFLGFFSETKDAWDARKREASGV 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  +  L+ +R      K +  +D IR +L + G  ++D K        T W+
Sbjct: 414 DAAQVTALIADRTAARARKDWKESDRIRDELAAMGVAIKDSK------EGTTWE 461


>gi|329729466|gb|EGG65869.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 466

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 168/481 (34%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  M+  HYR PI++ ++ +  A   L +   +       +                
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIATDLEEQSEYIQQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
                   + + +D NT +A+ A + LA+ + K       +  +L  F       + +LG
Sbjct: 346 DKILNQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED       +R
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|311029027|ref|ZP_07707117.1| cysteinyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 466

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 165/489 (33%), Positives = 253/489 (51%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL R+  +F  ++   ++MYVCGPTVY++ HIGNARP IVFD + R L Y   
Sbjct: 1   MTIHLYNTLTRQKEKFVPLEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEYRGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV N TD+DDK+I+ A++      + + +  I  +    + +D + L C   T  
Sbjct: 61  E--VNYVSNFTDVDDKLIKAAKE------LGEDVPTIAERFIAAYHEDVSALGCKQATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  +  +I  I+ +I  G+AYE++ ++ + T     YG  S + I++ ++GTR+   
Sbjct: 113 PRVTESMDIIIEFIEALIEKGYAYESDGDVYYRTREFKEYGKLSHQPIEDLQLGTRIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF+LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 DKKQDALDFVLWKAAKEGEIHWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKH 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              ++R  ML  HYR PI++  + L      L +      +                   
Sbjct: 285 DPQLLRFFMLSVHYRHPINYNEELLQSTNNGLERIRTAYANLKHRLDNTVDLATDDTEWV 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
                     +  + +D NT +AI  L  +A+++                 +  F     
Sbjct: 345 QKVEEFKNEFIKVMDDDFNTANAISVLFDMAKQANLYLNGKNTSEKVLKAFIAQFEELFS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ++G+ +  E    +  I    L+Q+R+   K + F+ AD IR +L++K  ILED      
Sbjct: 405 VIGVSLTAEEELLDEEIE--SLIQQRIDARKNRDFARADEIRDELKAKNIILEDT----- 457

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 458 -AQGTRWKR 465


>gi|317472691|ref|ZP_07932006.1| cysteinyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|316899868|gb|EFV21867.1| cysteinyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 466

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 191/489 (39%), Positives = 255/489 (52%), Gaps = 58/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  + P  + MYVCGPTVY++ HIGNARPMI+FD + R   Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        + + I  +  ++  KD   L     THQP+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE------GVSATEIAERYIEECKKDMEGLNVKPATHQPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  GHAYE N  + F T S   YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIDGMIRMIGTLIEKGHAYEVNGTVYFKTRSFDGYGKLSKKNIDDLEAGHRDIKVRG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     E  W SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKQDPLDFVLWKPKKEGEIAWPSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  E  AN W+HNGFLN++ +KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEACN-DECFANYWMHNGFLNIDNQKMSKSAGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
           +P  VIR  ML  HYR P++F+   +  A+  L +                T+ G  + A
Sbjct: 285 YPLQVIRFFMLSAHYRNPLNFSDTLVESAKNGLDRILTAIDLVRDQADKPETAAGKEEEA 344

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAH 390
                         A+ +D NT  A+ A+ +L + +              LL        
Sbjct: 345 NLEEARKLVGKFEEAMEDDFNTADAVSAIFELVKLANTTVKESSSDYAAKLLETMETLCG 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGIE  +E    +  I      ++     K K F+ AD IR +L  KG IL+D +    
Sbjct: 405 VLGIETKQEEDILDEEIERMIEERQ--QARKEKDFARADEIRDELLEKGIILKDTR---- 458

Query: 451 GQRMTRWKQ 459
                +WK+
Sbjct: 459 --EGVKWKR 465


>gi|223042919|ref|ZP_03612967.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443773|gb|EEE49870.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 466

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 170/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             NH+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W+SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  M+  HYR PI++ ++ +  A   L +   +       +                
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYIDQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
                   + + +D NT +A+ A + LA+ + K            H    ++   + +LG
Sbjct: 346 ETILRQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLHRFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  ++ N+ +   IEKL++ER    K K F+ AD IR  L+ +  ILED       +R
Sbjct: 406 VPLKGKNENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|126660010|ref|ZP_01731132.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126618688|gb|EAZ89435.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 482

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 174/502 (34%), Positives = 251/502 (50%), Gaps = 66/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL RK   F  I+   ++MY CG TVYD+ H+G+AR  I++DV+ R L+++  
Sbjct: 1   MTLTVYNTLTRKKEPFTTIEEGKVKMYCCGITVYDYCHLGHARTCIIWDVVRRYLQWHGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY++N TDIDDKI+ RAR+E         +  ++ +  + + +D  RL        
Sbjct: 61  N--VTYIQNFTDIDDKILNRARKEKT------TMEAVSERFIEAYFEDMERLGVQKADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  L+  +   G+AY +N ++ ++      YG  S RK+++ + G      
Sbjct: 113 PRATHTLNGIQRLVSELEAKGYAYASNGDVYYNVHQFKPYGKLSGRKLEDLQAGASGRVN 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E   KK+PADF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 LEDSEASKKKDPADFAVWKSAKPGEPAWDSPWGKGRPGWHIECSAMVRERLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELLE   
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-QPLARYWLHNGMVKVGGEKMSKSLGNFTTIRELLE--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
                     +RL +L  HYR+P+DFT + L  A        +                 
Sbjct: 289 ----KIDPMAVRLFILQAHYRKPVDFTDEALAAATNGWQTLSEGLLFGFQHGTTLGFKGD 344

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------- 383
                        +A+ +D N    +  L ++A+E  K  +LL                 
Sbjct: 345 MLELLPKFVKRFNNAVDDDFNFAGGLAVLFEIAKELRKEGNLLVHQGNTETNSEILEKQW 404

Query: 384 -IFNASAHILGIEVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYIRKQLES 437
                 A +LG+E  +  L    S      AIE L+++R    K K F+ +D IR +L+ 
Sbjct: 405 YTLRTLASVLGLEADRNQLQSEPSDGLNDTAIETLIEQRKEARKNKNFAESDRIRDELKE 464

Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
           +G IL D         +T W +
Sbjct: 465 QGIILVDQPGG-----LTSWHR 481


>gi|251809946|ref|ZP_04824419.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875020|ref|ZP_06283895.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251806489|gb|EES59146.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281296348|gb|EFA88867.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329734647|gb|EGG70954.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 466

 Score =  563 bits (1451), Expect = e-158,   Method: Composition-based stats.
 Identities = 169/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  M+  HYR PI++ ++ +  A   L +   +       +                
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQHI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
                   + + +D NT +A+ A + LA+ + K       +  +L  F       + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           I +  +  ++ +   IE+L++ER    K K F+ AD IR  L+++  ILED       +R
Sbjct: 406 IPLKSKETDELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|27467210|ref|NP_763847.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57866107|ref|YP_187766.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242241861|ref|ZP_04796306.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|30316150|sp|Q8CTU1|SYC_STAES RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216111|sp|Q5HRM3|SYC_STAEQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|27314752|gb|AAO03889.1|AE016744_292 cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57636765|gb|AAW53553.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|242234639|gb|EES36951.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 466

 Score =  562 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 168/481 (34%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  M+  HYR PI++ ++ +  A   L +   +       +                
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
                   + + +D NT +A+ A + LA+ + K       +  +L  F       + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED       +R
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 461

 Score =  562 bits (1450), Expect = e-158,   Method: Composition-based stats.
 Identities = 176/482 (36%), Positives = 256/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L ++  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCEALTERLIGEMYADFDALNMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A N +++F+ +    YG  SR+ +++ + G RV  + 
Sbjct: 114 ATQYIAEIIALVERLIDRGFAYVASNGDVLFEVAKFDEYGKLSRQDLEQLQAGARVDVEE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKKSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   + +             +           +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARASMERLYTSLRGLDTSVAAEGGEAFVERFKAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           L       A +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREINRLKAEDVAAASKLAARMRELAEVLGLLEQDPEAFLKGN 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                +    IE L++ R      K +++AD  R  L + G +LED      G + T W+
Sbjct: 406 TEGGDDEVAEIEALIKARNDARANKDWAAADAARDALTAMGIVLED------GAQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|207722904|ref|YP_002253338.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum MolK2]
 gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 465

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 257/484 (53%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTDRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQAEGANG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            + +   V+R  +L +HYR  ++++   L +A   L++             A        
Sbjct: 287 -KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSESH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH----- 400
                 A+ +D NT  A+  L +LA E  K     L+    A   ++G+     H     
Sbjct: 346 GQRFREAMNDDFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAFLQG 405

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +   ++ +E  ++ R +    + F+ AD IR  L + G +LED         +T
Sbjct: 406 GVGAAADGLDTVEVEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGG-----VT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|167745717|ref|ZP_02417844.1| hypothetical protein ANACAC_00410 [Anaerostipes caccae DSM 14662]
 gi|167655029|gb|EDR99158.1| hypothetical protein ANACAC_00410 [Anaerostipes caccae DSM 14662]
          Length = 466

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 191/489 (39%), Positives = 256/489 (52%), Gaps = 58/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  EF  + P  + +YVCGPTVY++ HIGNARPMI+FD + R   Y   + 
Sbjct: 1   MKIYNTLTRKKEEFVPVHPGKVGIYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        + + I  +  ++  KD   L     THQP+
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE------GVSATEIAERYIEECKKDMEGLNVKPATHQPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI +I  +I  GHAYE N  + F T S   YG  S++ ID+ + G R   V  
Sbjct: 113 ATEEIDGMIRMIGTLIEKGHAYEVNGTVYFKTRSFDGYGKLSKKNIDDLEAGHRDIKVRG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF+LWK     E  W SPWG GRPGWHIECS MS  Y+G   DIH GG DLI
Sbjct: 173 EEGKQDPLDFVLWKPKKEGEIAWPSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS   +  E  AN W+HNGFLN++ +KMSKS GNF T+ E+ E        
Sbjct: 233 FPHHENEIAQSEACN-DECFANYWMHNGFLNIDNQKMSKSAGNFFTVREISE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
           +P  VIR  ML  HYR P++F+   +  A+  L +                T+ G  + A
Sbjct: 285 YPLQVIRFFMLSAHYRNPLNFSDTLVESAKNGLDRILTAIDLVRDQADKPETAAGKEEEA 344

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAH 390
                         A+ +D NT  A+ A+ +L + +              LL I      
Sbjct: 345 NLEEARKLVGKFEEAMEDDFNTADAVSAIFELVKLANTTVKESSSDYAAKLLEIMETLCG 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGIE  +E    +  I      ++     K K F+ AD IR +L  KG IL+D +    
Sbjct: 405 VLGIETKQEEDILDEEIERMIEERQ--QARKEKDFARADEIRDELLEKGIILKDTR---- 458

Query: 451 GQRMTRWKQ 459
                +WK+
Sbjct: 459 --EGVKWKR 465


>gi|119485660|ref|ZP_01619935.1| Cysteinyl-tRNA synthetase, class Ia [Lyngbya sp. PCC 8106]
 gi|119456985|gb|EAW38112.1| Cysteinyl-tRNA synthetase, class Ia [Lyngbya sp. PCC 8106]
          Length = 481

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 184/500 (36%), Positives = 253/500 (50%), Gaps = 66/500 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R    F  ++P +++MY CG TVYD+ H+G+AR  I +DV+ R L +     
Sbjct: 3   LKIYNTQTRTKETFIPLEPQHVKMYCCGVTVYDYCHLGHARSYIFWDVVRRYLEWLGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI+ RA++E      N ++  ++ +  + + +D  RL        PR
Sbjct: 61  TVQYVQNFTDIDDKILNRAKKE------NSSMEAVSERFIEAYYEDLRRLNIRDADAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
           AT++I ++  LIQ +   G+AY +  ++ +     P YG  S RK D+ + G        
Sbjct: 115 ATDNISEIYQLIQQLEKKGYAYASKGDVFYSVEKFPEYGKLSGRKQDQLQAGASGRVSGA 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  KK+ +DF LWK S P EP W+SPWG GRPGWHIECSAM    LG   DIHGGG DLI
Sbjct: 175 EGEKKHSSDFALWKASKPGEPAWKSPWGEGRPGWHIECSAMVRQLLGATIDIHGGGGDLI 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+  E  A  W+HNGF+ + G KMSKS GNF TI +LLET       
Sbjct: 235 FPHHENEIAQSEAANC-EPLARFWMHNGFVTVGGEKMSKSLGNFTTIRQLLETV------ 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIID------ 348
               VIRL +   HYR+P+DFT   +T AE   +          Q     G +D      
Sbjct: 288 -DPMVIRLFVFQAHYRKPLDFTPDAITSAENGWNTLCEGLLFKSQHGEKLGWLDKNDLPP 346

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------I 384
                       A+ +D NT   +  L +LA+E     ++L                   
Sbjct: 347 ALHSEAVERFQIAMDDDFNTPGGLAVLFELAKELRTEGNILTHEGKTETPLPQIQQTWWT 406

Query: 385 FNASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
               A +LG+EV  E       +      IE L+Q+RL   K K ++  D IR +L+  G
Sbjct: 407 LVQLAEVLGLEVKPEDTSIPTASGLSDQEIEDLIQQRLAARKAKNYAEGDQIRDRLKEAG 466

Query: 440 FILEDYKNPDNGQRMTRWKQ 459
             L D    +     T W +
Sbjct: 467 ITLIDRPGGE-----TVWHR 481


>gi|238916434|ref|YP_002929951.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|259511832|sp|C4Z3N5|SYC_EUBE2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|238871794|gb|ACR71504.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 472

 Score =  562 bits (1449), Expect = e-158,   Method: Composition-based stats.
 Identities = 179/495 (36%), Positives = 253/495 (51%), Gaps = 64/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF+ ++   ++MYVCGPTVY+  HIGNARPMIVFD + R L Y   + 
Sbjct: 1   MRIYNTLSRRKEEFKPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYLEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        +   I+++   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKANEE------GVSAEEISTRYIAECKKDMEGMNIKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---- 180
           AT  I  MI +IQ +I  G+AYE N  + + T     YG  S++ ID+ + G R      
Sbjct: 113 ATQEIGGMIDMIQTLIDKGYAYEVNGTVYYRTRKFAEYGKLSKKNIDDLEAGHRDEAHSL 172

Query: 181 ---EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               +  K++P DF+LWK     EP W SPW  GRPGWHIECS MS  YL    DIH GG
Sbjct: 173 KVTGEDEKEDPLDFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLADEIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENEIAQS  A+ +   +  W+HN FLN++ +KMSKS GNF T+ ++      
Sbjct: 233 EDLIFPHHENEIAQSEAANGV-PFSKYWMHNAFLNIDNKKMSKSLGNFFTVRDI------ 285

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------- 337
             R +   V+R  ML  HYR P++F+   +  A+  L +                     
Sbjct: 286 -SREYDLEVLRFFMLSAHYRNPVNFSHDLMESAKNGLDRILTAVDNLRHLSENAKDVIMT 344

Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
               +   S   I      ++ +D NT  AI A+ +L + +  N            L+  
Sbjct: 345 EDEKKIIASIDDIYKKFEDSMDDDFNTADAISAIFELVKLANSNSSSDNSKEYIDTLMKK 404

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 ILG++  K+   + +   IE L+ ER    K K F+ AD IR +L +KG +L+D
Sbjct: 405 ITTLTDILGLKTDKKE--EMLDEDIEALIAERQQARKDKNFARADEIRDELLAKGIVLKD 462

Query: 445 YKNPDNGQRMTRWKQ 459
            +         RW +
Sbjct: 463 TR------EGVRWSR 471


>gi|257888689|ref|ZP_05668342.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824743|gb|EEV51675.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 470

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 175/494 (35%), Positives = 257/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANE------LGITAPEVADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           ++    V+R  M  T YR PI ++   + EA   L +   T                   
Sbjct: 286 QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
              T    ++   +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKITLLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 550

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 194/515 (37%), Positives = 247/515 (47%), Gaps = 80/515 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K+YNTL  K   F  I    + +YVCG TVYD  H+G+AR  +VFDVL R L Y  
Sbjct: 56  PMSLKLYNTLNNKKEVFTPIREGRVGLYVCGITVYDVCHVGHARSAVVFDVLKRYLEYRG 115

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VTY++N TD+DDKII RA  E        +IS I ++      KD  RL  L PT 
Sbjct: 116 YE--VTYIKNFTDVDDKIIARANAE------GVSISEIANRYIASHDKDMDRLGVLRPTV 167

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT HI +MI LI  +   G AY  +  + +     P YG  S RK+++   G R+  
Sbjct: 168 TPRATEHIGEMIELISKLQKRGLAYAVDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDV 227

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HK NP DF LWK S P EP W+SPWG GRPGWHIECS MS  YLG  FDIHGGG DL+
Sbjct: 228 NEHKNNPMDFALWKASKPNEPAWDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLV 287

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS      +  ANIWIHNGF+ +   KMSKS GN  TI E+L         
Sbjct: 288 FPHHENEIAQSEGVTG-KPLANIWIHNGFVKINSEKMSKSLGNVFTIQEMLTR------- 339

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
           + A VIRL ML +HYR  +DF+ + L+EA   + ++  T  +   +              
Sbjct: 340 YHAEVIRLFMLQSHYRSAVDFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEASPISPE 399

Query: 348 ----------------DPAVLSALYNDLNTVSAIQALHKLAREST--------------- 376
                               + A+ +DLNT  AI  L   AR+                 
Sbjct: 400 TLTGKTAELYAHVQGLPDRFVEAMDDDLNTARAIGYLFDAARQINGFIRDAKMAKSKEGW 459

Query: 377 KNHDLL-PIFNASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMK 423
           K   L         ++LG+      +                   IE L+ +R      K
Sbjct: 460 KVLALAGKSIKDLGYVLGLFQENPDVYFLQDREREIRKRGLEPAEIELLIADRWAARNDK 519

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  AD IR+ L  KG +L+D          T WK
Sbjct: 520 DWHKADEIRQLLTEKGIVLKDTPT------GTTWK 548


>gi|82543006|ref|YP_406953.1| cysteinyl-tRNA synthetase [Shigella boydii Sb227]
 gi|109894937|sp|Q324Y3|SYC_SHIBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81244417|gb|ABB65125.1| cysteine tRNA synthetase [Shigella boydii Sb227]
          Length = 439

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 167/448 (37%), Positives = 241/448 (53%), Gaps = 42/448 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 DKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA    +  N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDG-QYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +    L +                    +   + A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE    K  D+             + +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFS 426
              + +    IE L+Q+RL   K K ++
Sbjct: 406 AQADDSEVAEIEALIQQRLDARKAKDWA 433


>gi|302879529|ref|YP_003848093.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582318|gb|ADL56329.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 456

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 178/471 (37%), Positives = 251/471 (53%), Gaps = 37/471 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R   EF  I+P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR  +    + 
Sbjct: 2   LKIYNTLARDKQEFVPIEPNVVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWFKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA +       N++I  +T +       D   L    P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAAEN------NESIHSLTQRFIDAMHVDADALGVTRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P+M+ +I  +  +G AY+A + ++ +       YG  S + +++ + G RV    
Sbjct: 114 ATQYVPEMLEMIAKLEANGLAYQAADGDVNYAVRKFEGYGKLSGKSLEDLRAGERVEVTD 173

Query: 184 HKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +      E  W+S WGRGRPGWHIECSAM S  LG+ FDIHGGG DL
Sbjct: 174 AKNDPLDFVLWKHARDDEAEEVKWDSKWGRGRPGWHIECSAMGSKLLGEHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A +     N W+HNGF+ ++  KMSKS GNF TI E+L       +
Sbjct: 234 QFPHHENEIAQSEGAHQCS-YVNYWMHNGFVRVDNEKMSKSLGNFFTIREVL-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDP 349
            +   V+R  +L  HYR P++++   L +A+  L +      S                 
Sbjct: 286 QYDPEVVRFFILRAHYRSPLNYSDAHLDDAKKALDRLYTALKSGSASGVRAVDWTEAYAV 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCKE----HLNK 403
              +A+ +D NT  AI  L  LA +  +  + D      A   +LG+             
Sbjct: 346 RFKAAMDDDFNTAEAIAVLFDLANDVNRSQSEDAAAQLKALGAVLGLLERDPTEFLQGAG 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           +    I   +  R      K ++ AD IRK L + G +LED     N +R+
Sbjct: 406 SDDAQIVGQIAARNAAKLAKNYAEADRIRKALLADGIVLEDSAAGTNWRRV 456


>gi|298290922|ref|YP_003692861.1| cysteinyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296927433|gb|ADH88242.1| cysteinyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 464

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 218/471 (46%), Positives = 286/471 (60%), Gaps = 30/471 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++K+YNTL R    F  ++PS +RMYVCGPTVYDFAHIGNARP+IVFD+LYRLLR+ YG
Sbjct: 10  PELKLYNTLTRAKETFVPLEPSQVRMYVCGPTVYDFAHIGNARPVIVFDLLYRLLRHLYG 69

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V YVRNITD+DDKI  RA  E P + +N+AI+ +T     QF  D   L  L P  +
Sbjct: 70  AEHVKYVRNITDVDDKINARAASEFPGLDLNEAIAKVTFTTEAQFHDDLEALGVLHPDVE 129

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M  LI+ ++  GHAY A + ++F   S+P+YG  S R +++   G RV   
Sbjct: 130 PRATEHIAEMRVLIERLVASGHAYVAEDHVLFSVPSMPDYGQLSHRPLEDMIAGARVDVA 189

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +K++  DF+LWK S P EPGW SP G    GRPGWHIECSAMS  +LG+ FDIHGGG+D
Sbjct: 190 PYKQDAMDFVLWKPSKPGEPGWLSPAGIAVPGRPGWHIECSAMSWKHLGETFDIHGGGID 249

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE+AQS CA      A +W+HNGFL +EG KMSKS GNF+TI +LL       
Sbjct: 250 LVFPHHENEVAQSRCAFHANIMAKVWMHNGFLQVEGEKMSKSLGNFVTIRDLLAD----- 304

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--VLSALYN 357
             WP  V+RL ML THYR+PID+TV+ L E+   L +W   +       PA  VL AL +
Sbjct: 305 --WPGEVLRLNMLKTHYRQPIDWTVKGLEESAKTLEQWFDAAAPDAYPRPAAAVLEALAD 362

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV--CKEHLNKNI------SIAI 409
           DLNT  AI  +H L     K+H        +   LG E    +E               I
Sbjct: 363 DLNTPKAIAEMHAL-----KDHAGKKALAGTLAFLGFEPGPFREWAAAQAPELTIPEAEI 417

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           E  + ER+   + + ++++D IR +L + G  L+D K+       T W+ K
Sbjct: 418 EARIAERIEARRNRDWAASDRIRDELMALGVALKDNKDGT-----TTWEPK 463


>gi|88941991|sp|Q65UY1|SYC_MANSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 458

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 184/478 (38%), Positives = 259/478 (54%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I+P+ + MYVCG TVYD  H G+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITD+DDKII+RA      +  N+    +  +   +  KD   L  L P  +PR
Sbjct: 61  -LRYVRNITDVDDKIIKRA------LENNETCDQLVERMIAEMHKDFDALNILRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HIP++I +++ +I  GHAY A + +++FD  S   YG+ SR+ +++ + G RV  K 
Sbjct: 114 ATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVEIKS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA   E   N W+H G L +   KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILT-------KYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSAL 355
           A  +R   L   YR  +D++ + +  A   L +          ++            +A+
Sbjct: 286 AESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCETVEIPAEDQYVIDFKTAM 345

Query: 356 YNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEHL 401
            +D NT  A+  L +LARE          K + L       A +LG+         +   
Sbjct: 346 DDDFNTPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQGDA 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  IE L++ R      K +++AD  R +L + G +LED      G + T W++
Sbjct: 406 ADAEVSKIEALIKRRNEARAAKDWAAADAARNELTAMGVVLED------GAKGTTWRK 457


>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 478

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 183/491 (37%), Positives = 246/491 (50%), Gaps = 57/491 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNT+ERK   F+ + P  + MYVCGPTVYD  HIG+AR +IVFDV+ + L     
Sbjct: 1   MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN TD+DDKII RA      + +      +  +  ++F +D   L     T +
Sbjct: 61  E--VTYVRNFTDVDDKIINRA------VQLGIESHEVAERYIKEFYEDMDALNIKRATIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI ++I LI+ ++    AY  + +I +      +YG  S RK+++ + G RV   
Sbjct: 113 PKATEHIDKIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEID 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K NP DF LWK   P EP WESPWGRGRPGWHIECSAMSS YLG+ FDIHGGG DLIF
Sbjct: 173 ERKNNPFDFALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNGF+N+   KMSKS GNF+ I ++L       +S+
Sbjct: 233 PHHENEIAQSEGAF-EKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDIL-------KSY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
               +RL +L  HYR PIDFT + + E+E  L K          I               
Sbjct: 285 HPDSVRLFLLSNHYRSPIDFTDKAMEESEAALDKIYSAIQRVEEIADITGKDFINYPEGY 344

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNASAHILG 393
                 ++ +D NT   I  L    R   +  D              +         ++G
Sbjct: 345 WEKFCESMDDDFNTAKGIGYLFDSVRHINRLLDENSNSDEIKTIINSIYADIRKMGDVIG 404

Query: 394 IEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           I      +                   I+ LV++R    K K +  AD IR +L     I
Sbjct: 405 ILSEPAEIYFNKKKTKFIETKDVDPSLIDALVKQRFEARKAKDWKKADRIRDKLSGIDVI 464

Query: 442 LEDYKNPDNGQ 452
           +ED       +
Sbjct: 465 IEDKPEGSIWK 475


>gi|227552721|ref|ZP_03982770.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257897353|ref|ZP_05677006.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|227178121|gb|EEI59093.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833918|gb|EEV60339.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 470

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 176/494 (35%), Positives = 258/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      +  A   +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANE------LGIAAPEVADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           ++    V+R  M  T YR PI ++   + EA   L +   T                   
Sbjct: 286 QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
              T    ++   +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKITLLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|291563603|emb|CBL42419.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 469

 Score =  562 bits (1448), Expect = e-158,   Method: Composition-based stats.
 Identities = 175/492 (35%), Positives = 249/492 (50%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++  EF  ++P  ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIYNTLTKRKEEFVPVEPGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVDAETISKRYIAECKKDMEGMNIEPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +I  +I  G+AY A +  + +      +YG  S + +D+ + G R   V 
Sbjct: 113 ATEEICGMLNMISTLIEKGYAYVAADGTVYYSVRKFKDYGKLSHKNLDDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS M+  YLG   DIH GG DL
Sbjct: 173 GEEGKQDPNDFVLWKPKKEGEPYWESPWCEGRPGWHIECSVMAKRYLGDEIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +  A  W+HN FLN++ +KMSKS GNF T+ E+ E       
Sbjct: 233 IFPHHENEIAQSEAANG-KPFAKYWMHNAFLNIDNKKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAV 351
            +   V+R  ML  HYR P++F+   +  ++  L +           +   + G +    
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTGMEKLREAEAKAADGTMTEEE 344

Query: 352 LS--------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
           L               A+ +D NT  AI A+ +L + S               +      
Sbjct: 345 LENKKKAMELVAKYEAAMDDDFNTADAISAIFELIKLSNSTVSGASTKEYVSWMKNEIQR 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              ++GI    E   + +   +E L+ +R    K K F+ AD IR +L   G +LED + 
Sbjct: 405 LCDVMGI--ITEKKAEVLDSEVEDLIAQRQAARKAKNFALADEIRGKLLDMGIVLEDTR- 461

Query: 448 PDNGQRMTRWKQ 459
                   +WK+
Sbjct: 462 -----EGVKWKR 468


>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 481

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 187/484 (38%), Positives = 256/484 (52%), Gaps = 55/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL  K  EF  +  + +RMYVCG TVYD+ HIG+AR  +VFD++ R L   Y E 
Sbjct: 2   LIIFNTLTGKKEEFIPLQDNKVRMYVCGVTVYDYCHIGHARSSVVFDIIRRYL--IYKEY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII+R+ +E      N     +T K  ++   D  +L  + P   P+
Sbjct: 60  DVTFVKNFTDIDDKIIKRSNEE------NIHWKELTEKFIKEHDYDMEKLNIMPPDFTPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I +MI L + +I  G+AY  + ++ +      +YG  S+R +DE   G RV     
Sbjct: 114 ATEFIDEMIKLCEKLIEKGYAYVVDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK+S   EP WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DLIFPH
Sbjct: 174 KENPLDFALWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A+  +  A  WIHNGF+N+   KMSKS GNF TI E++       + +  
Sbjct: 234 HENEIAQSEAAE-EKMFAKYWIHNGFVNINKEKMSKSLGNFFTIREII-------KEFDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTSK 344
            V+R  +L THYR PIDF+   L EAE  L++                      + +   
Sbjct: 286 EVLRFFLLTTHYRSPIDFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLEEANKIF 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNAS-AH 390
                   +++ +D N+  A+ A+    +E  +  +             L   F      
Sbjct: 346 ENFKKEFETSMDDDFNSAKALAAIFDYIKEINRLLNQKVVKETYEEILKLTNNFKKIVNQ 405

Query: 391 ILGI--EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +LGI  +  KE    N+ I+  +L   ++ER    K K F  AD IR +LES G  L D 
Sbjct: 406 VLGIINKTPKEWFASNLPISESELIKKIEERTNARKNKNFELADKIRDELESLGIELLDT 465

Query: 446 KNPD 449
               
Sbjct: 466 PTGT 469


>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|226735066|sp|B5YID4|SYC_THEYD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 487

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 194/507 (38%), Positives = 258/507 (50%), Gaps = 73/507 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  K+ EF+ I+   + +Y CG TVYD  HIG+AR  +VFDV+ + LRY   E 
Sbjct: 1   MRVFNTLTDKLEEFKPINDKKVGIYACGVTVYDLCHIGHARSAVVFDVIVKYLRYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII RA +E        +   I  K T ++ KD  RL       +P+
Sbjct: 60  -VKFVKNFTDIDDKIINRANKE------GVSWKEIAEKYTGEYYKDMDRLGITRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           AT HI +MI +IQ +I  G+AYE        + F     P YG  S++KIDE   G RV 
Sbjct: 113 ATEHINEMIEIIQTLINKGYAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DL
Sbjct: 173 VDERKKSPLDFALWKASKPGEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS      +  A  WIHNGF+ +   KMSKS GN + I +LL+       
Sbjct: 233 IFPHHENEIAQSEAFTG-KPFAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDI------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
            + A  +RL +L +HYR PI+F  + + EAE  + +   T       +            
Sbjct: 286 -YDAEALRLFLLSSHYRSPIEFAHEYIKEAEATVDRVYSTIMRIEDFEKIEINDKSSIEF 344

Query: 349 -----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
                      P    A+ +D NT  A+  L +  +E  +  D  P              
Sbjct: 345 DKVKAMLENLKPEFEKAMDDDFNTAKALGILFEFIKEINRFMDKKPSQNKEIDFLVTAKR 404

Query: 384 IFNASAHILGI----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                  +L +          ++ K          I +L++ER    K K +  AD IR+
Sbjct: 405 AIKEIGSVLNLFQRQPVDWYRDLLKVKKIAIKEEEINRLIKERTEARKNKDWKKADSIRE 464

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
           QL SKG ILED  +       T WK K
Sbjct: 465 QLLSKGIILEDKPD------RTIWKVK 485


>gi|90411646|ref|ZP_01219656.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90327536|gb|EAS43889.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 464

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 180/485 (37%), Positives = 259/485 (53%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L ++  EF+ I P  + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTKQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +  KD   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCDSLTERLIGEMHKDFDALGMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I + + +I  G AY A N +++F+ S    YG  SR+ +D+ + G RV    
Sbjct: 114 ATEFIAEIITMCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCATG-SQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +   +     +   A           ++
Sbjct: 286 AESVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGLDLTAQAEGGEEFVTRFTAS 345

Query: 355 LYNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASAHILGIE------ 395
           + +D NT  A   L  + RE  +                L       A ILG+       
Sbjct: 346 MNDDFNTPEAYSVLFDMVREINRLKADETIADNIAQASALGARLRELADILGLLSQDPEA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +    ++    IE L+Q+RL     K +++AD  R +L +   ILED      G + T
Sbjct: 406 FLQGGAGQDDVAEIESLIQQRLDARAAKDWAAADAARDKLLAMKIILED------GPQGT 459

Query: 456 RWKQK 460
            W++K
Sbjct: 460 TWRRK 464


>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 469

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 177/486 (36%), Positives = 255/486 (52%), Gaps = 53/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L  +   F+ I+P  +RMYVCG TVYD+ H+G+AR M+VFD + R LR      
Sbjct: 2   LYIYNSLTNRKEPFRPIEPGRVRMYVCGMTVYDYCHLGHARAMVVFDTVVRYLRSAGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII RA +      + + ++++T +       DT  L CL P  +PR
Sbjct: 60  RVDYVRNITDVDDKIIRRAAE------LGEPVNVLTERFIAAMHADTAALGCLLPDAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA--NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           AT ++  ++ LIQ ++  G+AY+A     I +       YG  S  +++  + G RV   
Sbjct: 114 ATAYMDAIVALIQRLLDRGYAYQAVDEGSIYYAVERFEGYGRLSGERLEALRAGARVEPG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++ ADF+LWK + P EP W +PWG GRPGWHIECSAM+   LG+ FDIHGGGLDL F
Sbjct: 174 AGKRDAADFVLWKAAKPGEPSWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLKF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A       N W+HNG + +   KMSKS GNF T+ E+L+        +
Sbjct: 234 PHHENEIAQSEAAWGGR-YVNFWMHNGHIRINDEKMSKSLGNFFTVREVLQV-------Y 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVL 352
            A  IR  +L +HYR P++++   L  +   L +             +         A  
Sbjct: 286 RAEEIRYFLLSSHYRSPLNYSTSDLDNSRAALERLYLALRDLPFTEASPALAAPYREAFR 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNA------SAHILGIEVCK 398
            A+ +D NT  A+  L  LARE  +  D        L             A +      K
Sbjct: 346 QAMDDDFNTPLALAVLFDLAREINRRRDRFESQAAALAATLRELGGLLGLAQVAPEVFLK 405

Query: 399 EHLNKNISIAI-----EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                ++++ I     E L+ ER +  K + F++AD IR +L+++G  LED        +
Sbjct: 406 GGAGSSVAVGIASERVEALLAERALARKNRDFATADRIRDELQAQGIALEDT------PQ 459

Query: 454 MTRWKQ 459
            T W++
Sbjct: 460 GTAWRR 465


>gi|293367905|ref|ZP_06614543.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291317934|gb|EFE58342.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329738050|gb|EGG74271.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 466

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 168/481 (34%), Positives = 258/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F  D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYDDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  M+  HYR PI++ ++ +  A   L +   +       +                
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
                   + + +D NT +A+ A + LA+ + K       +  +L  F       + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED       +R
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|304392050|ref|ZP_07373992.1| cysteinyl-tRNA synthetase [Ahrensia sp. R2A130]
 gi|303296279|gb|EFL90637.1| cysteinyl-tRNA synthetase [Ahrensia sp. R2A130]
          Length = 500

 Score =  561 bits (1447), Expect = e-158,   Method: Composition-based stats.
 Identities = 237/499 (47%), Positives = 313/499 (62%), Gaps = 46/499 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YNTL R    F  IDP+N+RMYVCGPTVYD AHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 2   TQLTLYNTLTRSKEPFTPIDPNNVRMYVCGPTVYDHAHIGNARPVIVFDVLFRLLRHIYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKII+RAR++ P + +N AI+ +T   T QF  D   L CL PT +
Sbjct: 62  EDAVKYVRNITDVDDKIIDRARRDFPDLDLNAAIAKVTESTTAQFQADMKALGCLEPTVE 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P+AT HI  M+ +I  +I  G+AY A+     E++FD +S  +YG  S RK+D+Q+ G R
Sbjct: 122 PKATEHIGGMVEMISTLIAKGNAYVASGAKGREVLFDVTSDDDYGVLSNRKLDDQQAGAR 181

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGKV 230
           V  + HK+NP DF+LWK S   EPGW+  +          GRPGWHIECSAMS  +LG+ 
Sbjct: 182 VAVESHKRNPGDFVLWKESAADEPGWDGGFTSSSGGETIHGRPGWHIECSAMSKAHLGET 241

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGGLDLIFPHHENEIAQSCCA+  ++ AN+W+HNG+L +EG+KMSKS+GNFIT+++
Sbjct: 242 FDIHGGGLDLIFPHHENEIAQSCCANSTDRMANVWMHNGYLQVEGKKMSKSDGNFITVHD 301

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------- 343
           LL T+K GGR WP  V+RLA+LMTHYREP+DFTV+RL EA+ +L K  +   S       
Sbjct: 302 LLHTEKVGGRKWPGEVVRLAILMTHYREPLDFTVRRLEEADDILIKLNRIFDSLMTSTFA 361

Query: 344 --------KGIIDPAVLSA------LYNDLNTVSAIQALHKLARE---------STKNHD 380
                   +   + A  +A      L  DLN       L  L RE           K  D
Sbjct: 362 KAISRPPERAGTNSAYRTANRTILSLVEDLNF---KAVLDFLIRELRVSYHNLSEEKQSD 418

Query: 381 LLPIFNASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            L        +LGI+   +    ++    I   V+ R   +  K +  AD IR +L ++G
Sbjct: 419 WLDALARIFLMLGIKPAPQQTRNDVRDSQIAYAVRSRAEAIASKNWPVADRIRDELLAQG 478

Query: 440 FILEDYKNPDNGQRMTRWK 458
             L+D K+P+ G+R T W+
Sbjct: 479 IQLKDGKDPETGERTTTWE 497


>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|187629810|sp|A4J0Y9|SYC_DESRM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 486

 Score =  561 bits (1446), Expect = e-158,   Method: Composition-based stats.
 Identities = 179/507 (35%), Positives = 245/507 (48%), Gaps = 73/507 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R   EF   D  ++ MYVCGPT Y+F H+GNARP++ FD + R   + Y   
Sbjct: 1   MQIYNTLARAKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRY--FLYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKII RA +E            +  K  Q+F  D   L  +     P+
Sbjct: 59  KVDYVQNFTDVDDKIINRAAEEK------IDPLELAQKYIQEFFVDADALNVMRADTHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HI ++I LI+ +   GHAY  + ++ F   S   YG  S R +++ + G RV     
Sbjct: 113 VSEHIEEIIDLIKRLEDQGHAYVVDGDVYFAVRSFAEYGKLSGRSLEDMQAGARVEVDPR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK + P EP W+SPWG GRPGWHIECSAM+  YLG  FDIHGGG DLIFPH
Sbjct: 173 KKDPMDFALWKAAKPGEPSWDSPWGSGRPGWHIECSAMAEKYLGNGFDIHGGGFDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A      A  W+HNGF+ +   KMSKS GNF  + E+L         +P 
Sbjct: 233 HENEIAQSEAA-CKAPFARYWMHNGFITINQEKMSKSLGNFFLVREILA-------KFPP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------------ 340
            V+R  +L THYR P+DF  ++L  +   L +                            
Sbjct: 285 DVVRWYLLSTHYRSPLDFDDEKLVMSGKGLERIKTALRLLYEAMDLPVYEGEDIQGAENF 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLL-PI 384
             +   I      A+ +D NT  AI     LA+E                 K  D    +
Sbjct: 345 EETLQRIRLEFEKAMDDDFNTALAISYFFDLAKEVNIYVGKLNSKVTLEMRKILDQAHTL 404

Query: 385 FNASAHILGIEVCKEHLNKNI-----------SIAIEKLVQERLILLKMKKFSSADYIRK 433
                 +LGI    +   K +              ++ +++ R      K +S+AD IR 
Sbjct: 405 IKDFNRVLGILKEDKMTGKLLIEMAGADDTLTEGLVQLIIKIRQEARSKKDWSTADAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
            L+  G +LED        +  RWK++
Sbjct: 465 GLKELGVVLEDT------PQGVRWKKQ 485


>gi|293553639|ref|ZP_06674263.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602214|gb|EFF32442.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 470

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 177/494 (35%), Positives = 259/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I    + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGRVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANE------LGITAPEVADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L +   T         + S+ + D A
Sbjct: 286 KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|257462531|ref|ZP_05626942.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060185|ref|ZP_07924670.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685861|gb|EFS22696.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 473

 Score =  561 bits (1446), Expect = e-157,   Method: Composition-based stats.
 Identities = 187/493 (37%), Positives = 267/493 (54%), Gaps = 61/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   +  F       + MYVCGPTVY++ HIGNARP IVFD + R   Y   + 
Sbjct: 2   IKIYNTLSAALDTFVPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V YV+N TD+DDK+I+RA +E         +  I  +  + +++D   L        +P
Sbjct: 61  -VKYVQNFTDVDDKMIKRANEE------GSTVEEIAHRYIEAYLEDMKCLHIKEEGMLRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT HI +MI +IQ++I  GHAYEAN ++ F  S+    YG+ S++KI++ + G R+   
Sbjct: 114 KATEHIQEMIDMIQSLIDKGHAYEANGDVYFRVSTYHEEYGALSKQKIEDLQSGARIEVT 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS+ Y G  FDIHGGG DLIF
Sbjct: 174 ELKESPLDFALWKASKPGEPHWDSPWGKGRPGWHIECSAMSNKYFGNSFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+      A  W+HNG++N++G KMSKS GNF+ + ++L       + +
Sbjct: 234 PHHENEIAQSKCSCGGS-FAKYWMHNGYINIDGVKMSKSLGNFVLLRDIL-------KHF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
              VIR  ML  HYR+P++F+   L +A+I L +   +      I               
Sbjct: 286 SGKVIRFFMLSAHYRKPMNFSDTELNQAKIALERMENSLIRVHEISEHKIDPQGNSGEEL 345

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASA----- 389
                  +   + A+  D NT  AI  L +L RE  K  D         +   +A     
Sbjct: 346 KKVLKDTEEKFIEAMDEDFNTAQAIGVLFELVRELNKTLDSPYNQEGYEVLKKTATYLYH 405

Query: 390 ---HILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LGI V  E   +N+++  +E +++ R      K +  +D IR +L   G  ++D 
Sbjct: 406 ILYDVLGIAVEVETKVENLTVDLVEFILELRREARAAKNWELSDRIRDRLAELGIQIKDG 465

Query: 446 KNPDNGQRMTRWK 458
           K+       T W+
Sbjct: 466 KDS------TTWR 472


>gi|257899915|ref|ZP_05679568.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837827|gb|EEV62901.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 470

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 177/494 (35%), Positives = 260/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANE------LGITAPEVADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L +   T         + S+ + D A
Sbjct: 286 QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPEVSATVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|315659130|ref|ZP_07911995.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315495854|gb|EFU84184.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 466

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 169/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   + 
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  +  Q F +D   L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKLIKRSQE------LNESVPEIADRYIQAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+N++  G+AYE++ ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMDHMEDIIEFIKNLVDEGYAYESHGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWSSPFGEGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ ++ A+  L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVSAAKSGLERIRNSYQLIEERETIATNIVEQTDYIEQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I       + +D NT +A+ A + LA+ + K       +  ++  F       + +LG
Sbjct: 346 DEILKQFEQVMNDDFNTANAVTAWYDLAKLANKYVLEKSTSTAVIERFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  +  +   IE+++ ER    K K F+ AD IR  L+++  ILED       +R
Sbjct: 406 VPLKGQEADVLLDEEIEQMIAERDEARKNKDFARADEIRDTLKAQHIILEDTPQGVRYKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|289551670|ref|YP_003472574.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289181201|gb|ADC88446.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 466

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 169/481 (35%), Positives = 260/481 (54%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   + 
Sbjct: 2   ITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +N+++  I  +  Q F +D   L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKLIKRSQE------LNESVPEIADRYIQAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+N++  G+AYE++ ++ F T     YG  S + ID+ K+G R+     
Sbjct: 114 VMDHMEDIIEFIKNLVDEGYAYESHGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G GRPGWHIECS M+ H LGK  DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWSSPFGEGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TSK 344
            V+R  M+  HYR PI++ ++ ++ A+  L +   +                        
Sbjct: 286 DVLRFFMISVHYRSPINYNMELVSAAKSGLERIRNSYQLIEERETIATNIVEQTDYIEQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
             I       + +D NT +A+ A + LA+ + K       +  ++  F       + +LG
Sbjct: 346 DAILKQFEQVMNDDFNTANAVTAWYDLAKLANKYVLEKSTSTAVIERFKEVYQIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +  +  +   IE+++ ER    K K F+ AD IR  L+++  ILED       +R
Sbjct: 406 VPLKGQEADVLLDEEIEQMIAERDEARKNKDFARADEIRDTLKAQHIILEDTPQGVRYKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|329769070|ref|ZP_08260492.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328839561|gb|EGF89137.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 465

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 182/488 (37%), Positives = 273/488 (55%), Gaps = 56/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + ++MYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVKMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E        + + +T+K  + F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEE------GISTTELTNKYIEAFFKDYDALGCARATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I +++  G AYE+N ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIIDFIADLVKEGFAYESNGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W+SP+G GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGETIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     +N W+HN F+N++  KMSKS GNF  + +++            
Sbjct: 234 HENEIAQSECHNHA-PFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIA-------EIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLSA 354
            V+RL ML  HYR PI++T++ +  A     K               T++ ++D  V++A
Sbjct: 286 MVLRLFMLTVHYRTPINYTLENIELATTNYEKLKTAYQNLQFRLNNETTEEVLDKEVVNA 345

Query: 355 -----------LYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----IL 392
                      + +D NT +A+ + ++L R S         N + L + NA+      IL
Sbjct: 346 VTQELEKFEEYMQDDFNTANALSSWYELVRISNSYTSKETVNKETLELLNAAFETYSSIL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI V ++  NK     IE L+ ER    K + F+ AD IR  L+ +G +LED K      
Sbjct: 406 GINVKED--NKLDDSYIENLIAEREQARKDRNFALADKIRDDLKEQGIVLEDTK------ 457

Query: 453 RMTRWKQK 460
           +  RWK++
Sbjct: 458 QGVRWKKQ 465


>gi|89893193|ref|YP_516680.1| hypothetical protein DSY0447 [Desulfitobacterium hafniense Y51]
 gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997351|sp|Q250Q6|SYC_DESHY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781676|sp|B8G1U2|SYC_DESHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 477

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 175/496 (35%), Positives = 255/496 (51%), Gaps = 61/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT+  +  EF+  +   + MY CGPTVY++ H+GN R ++VFD++ R L   Y   
Sbjct: 3   LRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYL--LYKGY 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII+R ++E            +      ++ KD   L  +  +  P+
Sbjct: 61  DVTFVQNFTDIDDKIIKRGQEE------GRDPLELAQDYIGEYFKDAAALNLMPASIHPK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HIP+MI +I+ +   G AY  + ++ F    +P YG  S R +++ + G RV     
Sbjct: 115 ATDHIPEMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVGER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG  FDIHGGG DL+FPH
Sbjct: 175 KQNPMDFALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      E  A  W+HN FL +  +KMSKS GNF T+ E+LE        +P 
Sbjct: 235 HENEIAQAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILE-------HFPG 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----DPAVLSA----- 354
            VIR  +L THYR P+DF  + L  A+  L +   +              +  +A     
Sbjct: 288 EVIRFYLLGTHYRSPLDFDDENLQMAQKGLERLQTSIRLADEALGRQGQNSADAASGQKL 347

Query: 355 --------------LYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
                         + +D N+  A  +L +L +    +                     A
Sbjct: 348 RAAAEEARREFAEAMDDDFNSALAYASLFELGKAINAHVQAYPYSSEGLLKARATLWELA 407

Query: 390 HILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LG ++ K     E  N+ +   +E L++ R I  K K +  +D IR +L+  G +LED
Sbjct: 408 DVLGFDLAKPANQAEAGNQKLDQVMELLLEVRAIARKKKDWEMSDLIRDRLKDLGIVLED 467

Query: 445 YKNPDNGQRMTRWKQK 460
                   +  RW  K
Sbjct: 468 T------PQGARWTLK 477


>gi|313884762|ref|ZP_07818517.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620023|gb|EFR31457.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 475

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 172/497 (34%), Positives = 246/497 (49%), Gaps = 63/497 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYNTL R+  +F    P+ + MYVCGPTVY++ HIGNAR  + FD + R L+Y   
Sbjct: 1   MTIQIYNTLTRQKEDFVPQVPNQVSMYVCGPTVYNYIHIGNARSAVAFDTVRRYLQYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDKII+ A+ E        +   ++ K    F +DT  +  L     
Sbjct: 61  Q--VNYVSNFTDVDDKIIKAAKAEDL------STEALSDKYIAAFKEDTAAINILPANIH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
           PR  +HI ++I  I+ +I   HAY +  ++ F T S   YG  S + I E ++G      
Sbjct: 113 PRVKDHITEIIDYIKVLIESDHAYASQGDVYFRTQSFDGYGKLSHQSISELEIGASQRTD 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E   K++P DF LWK +   E  W SPWG GRPGWHIECS MS+ YLG   DIHGGG 
Sbjct: 173 TAETDRKEDPLDFALWKSAKEGEVSWPSPWGPGRPGWHIECSVMSTKYLGDTLDIHGGGQ 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQ+   +  E  AN W+HNGF+    +G KMSKS GNF+ + +LL    
Sbjct: 233 DLEFPHHENEIAQAEAHNHGENFANYWMHNGFVTFGEDGEKMSKSLGNFVLLRDLL---- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------- 346
              +     V+R  +   HYR P+ +  Q L EA+  + +  + S    +          
Sbjct: 289 ---KEADPMVVRYLLGTVHYRRPLRYDDQALQEAQTNIKRLEEVSRRLDLRLADATTQAN 345

Query: 347 -------------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLL 382
                        ++   + A+ +D N  + +  + +L +E  +              + 
Sbjct: 346 LDTDEANLAVLAQLEADFIQAMDDDFNAANGMTVIFELVKEINRYLQSEVVSEKVLSKMQ 405

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            IF     I G+    E     +   I+ L+ ER +  K K F  AD IR QL+ +G  L
Sbjct: 406 EIFKDLLAIFGLVF--ETKEDLLDQEIQALIDERNVARKAKDFGRADEIRDQLKEQGIYL 463

Query: 443 EDYKNPDNGQRMTRWKQ 459
           +D        + T WK+
Sbjct: 464 DDT------PQGTTWKR 474


>gi|237736150|ref|ZP_04566631.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421703|gb|EEO36750.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 472

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 185/491 (37%), Positives = 265/491 (53%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK+ EF+ +    + MYVCGPTVY++ HIGNARP I FD + R   +   + 
Sbjct: 2   IKIYNTLTRKLEEFKPVKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEFRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            VTYV N TD+DDKII+RA +E        +   + +K  + + +DT ++        +P
Sbjct: 61  -VTYVSNFTDVDDKIIKRANEE------GISCEEVAAKYIKAYFEDTAKVNLKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT HI  MI LI+++I  GHAYE+  ++ FD  S  + Y   S + +++ + G R+   
Sbjct: 114 KATEHIGGMIKLIKSLIEKGHAYESQGDVYFDVESYKDEYLGLSHQNLEDLRSGARIEIS 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK++   EP W SPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 174 EIKKSPLDFALWKKAKEGEPSWNSPWGQGRPGWHIECSAMSHKYLGDTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C    +  A  W+HNG++N+ G KMSKS GNF  + ++LE        +
Sbjct: 234 PHHENEIAQSKCGCGGD-YARYWMHNGYINVNGEKMSKSLGNFFLLRDVLE-------HY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              V+RL +L +HYR+PIDF+   LT+A+  L +                          
Sbjct: 286 DGRVVRLFVLSSHYRKPIDFSDAELTQAKTSLERIENALMRGKEAVIDVKADGSSCMELK 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNA 387
               +     ++A+  D NT   + A+ +L +E  K  D              +  I N 
Sbjct: 346 EQLAVAKEKFIAAMDEDFNTSMGLGAIFELVKELNKAVDTPINAEGAEVVKETVEYIINV 405

Query: 388 SAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               LG+++  E +  N+ S  IE +++ R      K ++ +D IR +L   G  ++D K
Sbjct: 406 MEEALGVKLKLETVVGNMTSELIEFILELRREARNEKNWAMSDKIRDRLAEMGIKIKDGK 465

Query: 447 NPDNGQRMTRW 457
           +       T W
Sbjct: 466 DK------TTW 470


>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6831683|sp|O67163|SYC_AQUAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 495

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 173/514 (33%), Positives = 251/514 (48%), Gaps = 78/514 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL  K+ EF  I+P  + +Y CG TVYD +H+G+ R +IVFDV  R L +   
Sbjct: 1   MSLRIYNTLSGKVEEFVPINPPKVLIYTCGVTVYDDSHVGHGRSLIVFDVFRRFLEHLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN TD+DDKII RA+QE            I  +   ++  D   +       +
Sbjct: 61  Q--VKFVRNFTDVDDKIINRAKQECT------DFMTIADRYIARYYVDMENIRVRPADVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HIP++I +IQ ++  G+AY    ++ F      +YG  S+R I+E   G RV   
Sbjct: 113 PRVTEHIPEIIEVIQKLVEKGYAYVVEGDVYFSVKKFKDYGKLSKRDIEELIAGARVEPS 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL+F
Sbjct: 173 EKKRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HNG + + G+KMSKS GN++T+ E+          +
Sbjct: 233 PHHENEIAQAEAITG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYT-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
              V+RL +L THYR P+DF+ +++ E      +         ++               
Sbjct: 285 HPDVLRLLVLFTHYRSPLDFSWEKMEETLKAYERLKNAIEDLELLKKLQVVESKEGGTHP 344

Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
                   +    ++L +D NT  A+  ++KL  E  K  +                   
Sbjct: 345 LYEQVKEFEENFYASLSDDFNTPEALSHVYKLVGELNKVKNKAYSEGKITDRELSAYEFA 404

Query: 383 --PIFNASAHILGI--------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
              + N    I G+              E   E         I+ L++ R I  K K F 
Sbjct: 405 SKSLLNTMKKIFGLLEDLYPECKVERVVERELEAGQVFDEKLIQILIEARNIARKEKVFK 464

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            ADYIR +L+  G +LED          T+WK++
Sbjct: 465 VADYIRDKLKELGIVLEDT------PAGTKWKKR 492


>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|109894959|sp|Q3SHN1|SYC_THIDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
           ATCC 25259]
          Length = 454

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 180/475 (37%), Positives = 260/475 (54%), Gaps = 41/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I N+L R   EF  + P  +RMYVCG TVYD  H+G+AR  +VFD++ R LR      
Sbjct: 2   LHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRASGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        +  + +T +   +  +D   L  L P H+PR
Sbjct: 60  AVEYVRNITDIDDKIIKRAHENK------ETPAALTERFIAEMHEDERALGVLPPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ QM+ LI  ++  G AY A N ++ +     P YG  S + +DE + G RV    
Sbjct: 114 ATAYVAQMLALIAQLVDRGLAYAAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVDP 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK + P EP WESPWG+GRPGWHIECSAMS+  LG+ FDIHGGG DL FP
Sbjct: 174 NKRDPMDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+L       + + 
Sbjct: 234 HHENEIAQSEGAHGC-TFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVL-------QKYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIID------PAVLSA 354
           A ++R  +L  HYR P++++   L +A   L++       + + G +D           A
Sbjct: 286 AEIVRFFILRAHYRSPLNYSDAHLDDARGALTRLYTALKGAPAAGPVDWDAPAAARFRGA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGI------EVCKEHLNKN--I 405
           + +D NT  AI  L +LA E+ +              ++G+      +  +   ++    
Sbjct: 346 MDDDFNTPEAIAVLFELAAEANRGDTGAAQTLRNLGAVIGLLQRDASDFLQAGTSEAGLD 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  IE  +  R    K + F+ +D IR +L + G +LED      G   T W+++
Sbjct: 406 ASEIEARIAARQAARKARDFAESDRIRDELAAAGIVLED------GPGGTTWRRQ 454


>gi|323483933|ref|ZP_08089308.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
           WAL-14163]
 gi|323693471|ref|ZP_08107680.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
 gi|323402771|gb|EGA95094.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
           WAL-14163]
 gi|323502478|gb|EGB18331.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
          Length = 468

 Score =  561 bits (1445), Expect = e-157,   Method: Composition-based stats.
 Identities = 178/491 (36%), Positives = 250/491 (50%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R   EF  ++   ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKIFNTLSRTKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            I+ +  ++  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEE------GVDADTISKRYIEECKKDMAMMNVKPATTHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +IQ++I  GHAY   +  + F T S   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMLDMIQDLIDKGHAYTGKDGTVYFRTKSFKEYGKLSHKNLEDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P DF+LWK     EP WESPW  GRPGWHIECS MS  YLG   DIH GG DL
Sbjct: 173 GEEDKEDPTDFVLWKPKKDGEPYWESPWCNGRPGWHIECSVMSKKYLGDSIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  ++  +  A  W+HN FLN++ RKMSKS GNF T+ E+ E       
Sbjct: 233 VFPHHENEIAQSEASNG-KTFAKYWMHNAFLNIDNRKMSKSLGNFFTVREISE------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------P 338
            +   V+R  ML  HYR P++F+ + +  ++  L +                        
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEASKNGLERILTAVEKLNDALKAAEGELTESEK 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
           +  TS         +++ +D NT  AI A+ +L + S               L       
Sbjct: 345 ENITSAKEFVQKFEASMDDDFNTADAISAVFELVKFSNTTASENSSKAYLSWLKETIEKL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI    E   + +   IE ++ +R    K K F+ AD IR +L   G +LED +  
Sbjct: 405 CDVLGI--ITEKKEEILDSEIEDMIAQRQQARKDKNFALADEIRGKLLEMGIVLEDTR-- 460

Query: 449 DNGQRMTRWKQ 459
                  +WK+
Sbjct: 461 ----EGVKWKR 467


>gi|293572688|ref|ZP_06683656.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607274|gb|EFF36628.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 470

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 177/494 (35%), Positives = 260/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANE------LGITAPEVADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L +   T         + S+ + D A
Sbjct: 286 QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPEVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|228477775|ref|ZP_04062403.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250467|gb|EEK09681.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 447

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 164/468 (35%), Positives = 247/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYCGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +         +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------AGISTKELSDKFIAAFMEDTGQLGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             N++ ++I  +  ++  G AY +  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIITFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R  +    YR+PI+FT + + +AE+ L     T                   A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEQVNQAELQTYLDAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + +  L  +A+       +  +   F     + GI   +E L+++    
Sbjct: 346 QEAMDDDFNTANGVTVLFDMAKWINSGNYDQTVKDAFEKMLQVFGIVFEEEVLDED---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 402 IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|225387932|ref|ZP_03757696.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
           DSM 15981]
 gi|225045975|gb|EEG56221.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
           DSM 15981]
          Length = 469

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 181/487 (37%), Positives = 252/487 (51%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  + P  ++MYVCGPTVY+F HIGNARPMIVFD + R   Y   E 
Sbjct: 1   MKIFNTLSRRKEEFVPLTPGVVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E            I+ +  ++  KD   +     T  P 
Sbjct: 60  -VQYVSNFTDVDDKIIKKAIEE------GVDADTISKRYIEECKKDMASMNVKPATVHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +I  +I  GHAY A +  + F T S   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMLDMIGTLIEKGHAYAAADGTVYFRTGSFKEYGKLSHKNLEDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++PADF+LWK     EP WESPW +GRPGWHIECS MS  YLG+  DIH GG DL
Sbjct: 173 GEEGKEDPADFVLWKPKKDGEPFWESPWCQGRPGWHIECSVMSKKYLGEQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +  A  W+HN FLN++ RKMSKS GNF T+ E+       G 
Sbjct: 233 IFPHHENEIAQSESAN-DKPFATYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
            +   V+R  ML  HYR P++F+   +  ++  L +          ++            
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERIITCMEKLRDLESKARGNAETCDE 344

Query: 353 ---------------SALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
                          +A+ +D NT  AI A+ +L + +    D          L  +   
Sbjct: 345 QNNMAQADGLRGKYEAAMDDDFNTADAISAVFELVKLANSTADADSTARYVSYLKDMIQE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI    E   + +   +E+L+  R    K K F+ AD IR +L   G +LED + 
Sbjct: 405 LCDVLGI--ITERKAETLDSQVEELIAARQQARKEKNFALADEIRGRLLDMGIVLEDTRE 462

Query: 448 PDNGQRM 454
               +R+
Sbjct: 463 GVKWKRV 469


>gi|304395563|ref|ZP_07377446.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356857|gb|EFM21221.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
          Length = 461

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 184/482 (38%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++I  +T++   +   D   L  L P  +PR
Sbjct: 61  -LNYVRNITDIDDKIIKRANEN------GESIETLTNRMIGEMHNDFAALGILPPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L++ +I  GHAY A+  +++FD  S  +YG+ SR+ +++ + G RV    
Sbjct: 114 ATRHIAEIIELVEKLIARGHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSSCAHDG-PYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  +++    L +A   L +             ++     +    SA
Sbjct: 286 AETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSVPASGGDAFEARFRSA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +         H L       A++LGI      L     
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKSEDGASAHALASKLREMANVLGILQQDPELFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              N      IE  V+ R      K ++ AD  R +L + G I+ED      G + + W+
Sbjct: 406 AQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVED------GPQGSSWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|253577158|ref|ZP_04854478.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251843402|gb|EES71430.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 468

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 172/492 (34%), Positives = 247/492 (50%), Gaps = 58/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R   EF ++ P  ++MYVCGPTVY + HIGNARPMI FDV+   L     
Sbjct: 1   MGLQIYNTLTRAKEEFVSLTPGKVKMYVCGPTVYGYIHIGNARPMIFFDVVRSYLENQRY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I +A +      +N  +  +     + + +D   L     T  
Sbjct: 61  D--VNYVVNFTDVDDKLIRKAEE------MNLTVPEVAEMFIKAYYEDLDGLGIPRATAN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  I+++   G AYE+  ++ F T   P YG  S + I E + G R+   
Sbjct: 113 PRVTENMDVIINFIRDLEQKGFAYESGGDVFFRTHKFPEYGKLSGQNIGELQFGIRIDVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK + P E  W SPWG GRPGWHIECSAMS   LG   DIHGGG DL F
Sbjct: 173 ERKEHPEDFVLWKAAKPGEIHWSSPWGEGRPGWHIECSAMSRQLLGDTLDIHGGGQDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE E+AQS  A   +  A  W+HNG++N++G KMSKS GN + + +L          +
Sbjct: 233 PHHECEVAQSEAATG-KPLARYWMHNGYINIDGEKMSKSLGNGVLVKDLRA-------QY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------PQ 339
               IR  ML THYR P++F+ + + +AE  + +                        P+
Sbjct: 285 KREAIRYFMLSTHYRNPLNFSEETMQQAERSVERISNAANNLRHRLNTAPQGGETKVTPE 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
            +     I     + + +D NT  AI A+ +   E                  L +F   
Sbjct: 345 WAEKLETIRNLFHAKMQDDFNTPDAITAVFEWVSEVNALLQQPVTVRGDLEAALQLFEEM 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +L I +  E   +     IE L+ ER    K K ++ AD IR  L+++G +LED    
Sbjct: 405 NGVLRIALPPE--TELPGEEIEALIAERAEARKAKNWARADEIRDLLDARGIVLEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               +  RW++K
Sbjct: 460 ---PQGMRWRRK 468


>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
 gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
          Length = 482

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 185/497 (37%), Positives = 262/497 (52%), Gaps = 61/497 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I IY+++  +   F  ++   + MYVCG TVYD+ HIG+AR M+ FDV+ R LR+  
Sbjct: 7   PMPITIYDSMSGQKRPFTPLEAGKVGMYVCGMTVYDYCHIGHARVMVGFDVVVRWLRHIG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII RA+         ++I  +T +  +   +D   L C  P  
Sbjct: 67  YD--VNYVRNITDIDDKIINRAKDN------GESIYELTDRFIKAMHEDADNLGCERPNS 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           +P+AT+ IPQM +LIQ +     AY+ A  ++ +   +   YG  S+R++ + + G   R
Sbjct: 119 EPKATDFIPQMQHLIQTLESKNLAYQGATGDVYYAVENFAEYGKLSKRRLADMQAGASER 178

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V  +  KKNP DF+LWK +   EP    W+SPWG GRPGWHIECSAMS+  LG  FDIHG
Sbjct: 179 VNVETDKKNPFDFVLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHG 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI +++   
Sbjct: 239 GGHDLQFPHHENEIAQSEGATG-KTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVMG-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIID 348
                 +    IR  +L +HYR P++F+   L EA+  L++  Q   S        G ID
Sbjct: 296 -----QFHPETIRFFILSSHYRSPVNFSDSALKEAQTSLTRLYQALKSVESLTEPAGEID 350

Query: 349 PA-----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF---------------NAS 388
                     A+ +D N+  A+  L  LARE  K  +L  +                   
Sbjct: 351 ETPFETPFNQAMCDDFNSAGAVSVLFSLAREINKAVNLETVEGNAQALALATLLKDLAQP 410

Query: 389 AHILGI---EVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            +IL +   +  +  + +        IE  ++ R      K F+ AD IR  L+++G  L
Sbjct: 411 LNILQLNPTDFLQAKVGETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSDLKAQGIEL 470

Query: 443 EDYKNPDNGQRMTRWKQ 459
           ED KN       T W++
Sbjct: 471 EDGKN------GTTWRR 481


>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|61216190|sp|Q6AJ23|SYC_DESPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 489

 Score =  560 bits (1444), Expect = e-157,   Method: Composition-based stats.
 Identities = 179/499 (35%), Positives = 255/499 (51%), Gaps = 66/499 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL  K    Q I+P+++++YVCG T YD+ HIG+AR  + FD++ R LRY   
Sbjct: 1   MDIRVYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYLDY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN TDIDDKII RA +             +  +   +F  D   L  L P  +
Sbjct: 61  K--VTFVRNFTDIDDKIIARANE------TGVTAQALAERFIDEFHTDMDNLGTLRPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI +MI +IQ ++    AY +  ++ +  +S P YG  S R I++ + G R+   
Sbjct: 113 PKATEHIQEMIDIIQELVDKDMAYPSAGDVYYVVNSFPEYGKLSGRNIEDMQAGARISIN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK S P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLIF
Sbjct: 173 EQKRNPMDFALWKASKPGEPSWESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A+  +  AN WIH+GF+ ++  KMSKS GNF+TI ++L+        +
Sbjct: 233 PHHENEIAQSEGANG-KPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDILD-------HY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
              ++R  +  T YR P+DF+   + +AE  L +  +                       
Sbjct: 285 HPEILRAFIFSTQYRNPLDFSEIAMQDAETALVRLYECLHDIQQLAKGDPTLPALISAKD 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PI 384
           +     I+     A+ ND NT  A+  L+   +   +    L                 +
Sbjct: 345 AAKLNSIETRFQEAMNNDFNTALALGVLYDAIKIINRAQRALTDTPSALDVKMLKGSMTL 404

Query: 385 FNASAHILGI------EVCKEHLNKNIS------IAIEKLVQERLILLKMKKFSSADYIR 432
               A I+G+         ++   K +S        IE  +Q+RL     K ++ +D IR
Sbjct: 405 IQKLAGIVGLLQEDANLFLQQRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIR 464

Query: 433 KQLESKGFILEDYKNPDNG 451
             L  KG  L+D  +    
Sbjct: 465 DILLEKGITLKDGADGTGW 483


>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 479

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 176/484 (36%), Positives = 255/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  ++P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 16  ESLRIYNTLARDKQTFVPLEPGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 75

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +  Q   +D   L    P  +
Sbjct: 76  Q--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIQALHEDADALGIARPDME 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +   G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 128 PRATDFIPQMLGMIEKLEEKGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 187

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK+S   EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 188 NDAKEDPLDFVLWKQSKADEPADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIHGGGQ 247

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 248 DLQFPHHENEIAQSEAATG-QPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 301

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  +   HYR P++++   + +A   L +                      
Sbjct: 302 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRLYTALKDVTPDGAALDWNEAHA 359

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL----- 401
               +A+ +D NT  A+  L +LA E  +  D  L     +   +LG+   +        
Sbjct: 360 QRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQQA 419

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                       AIE  + ER+   + K +++AD IR +L   G  LED         +T
Sbjct: 420 AGAAVQGALEPAAIEAKIAERVAAKQAKDYAAADRIRAELLEAGVALEDKPGG-----LT 474

Query: 456 RWKQ 459
            W++
Sbjct: 475 EWRR 478


>gi|257886072|ref|ZP_05665725.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821928|gb|EEV49058.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 470

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 177/494 (35%), Positives = 259/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTASE------LGITAPEVADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L +   T         + S  + D A
Sbjct: 286 KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASDNLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F+ +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 461

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 180/480 (37%), Positives = 260/480 (54%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+N+L R+   FQ I+P  +RMYVCG TVYD+ H+G+AR ++VFDV+YR LR    + 
Sbjct: 2   LQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLRALGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+RNITDIDDKII RA +        +    +T +  Q   +D+  L  L PT +PR
Sbjct: 61  -VTYIRNITDIDDKIIRRANEN------GEPFQALTERFIQAMREDSEALGVLPPTDEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +++ ++Q +I  G AY A+  ++ +  S  P+YG  S +   + + G+RV    
Sbjct: 114 ATAHIGEILAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIGE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 174 SKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E   N+W+HNGF+ +   KMSKS GNF T+ E+L       R + 
Sbjct: 234 HHENEIAQSEGATG-EPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREIL-------RLYR 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
              +R  +L +HYR P+++    L +A   L++            PA          +A+
Sbjct: 286 PEEVRYFILTSHYRSPLNYDDSALQKARAALTRLYTALRGLPEAAPAEGEAFRARFQAAM 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHDL--------LPIFNASAHILGIEVCKEH------- 400
            +D NT  A+  L +LARE  +              +       LG+             
Sbjct: 346 DDDFNTPEALAVLFELAREINRLRSDGSDQAAAHGALLRELGAALGLLQDDPERYLRGGA 405

Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +      IE ++ +R      + ++ AD +R+ L + G +LED      G + T W++
Sbjct: 406 DADGPSDAEIEAMIAQRRAARANRDWAEADRLREALTAAGIVLED------GPQGTTWRR 459


>gi|220910551|ref|YP_002485862.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254781541|sp|B8HQA4|SYC_CYAP4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219867162|gb|ACL47501.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 494

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 186/513 (36%), Positives = 272/513 (53%), Gaps = 76/513 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R    F+ ++P +++MY CG TVYD+ H+G+AR  IV+DV+ R L++   
Sbjct: 1   MPLSLYNTLTRHQEPFEPLEPGHVKMYCCGVTVYDYCHLGHARSYIVWDVVRRYLQWSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV+N TDIDDKI+ RARQE      N  +  ++ +  Q + +D  RL  L     
Sbjct: 61  Q--VRYVQNFTDIDDKILNRARQE------NSTMQAVSDRFIQAYHEDMQRLNILLADVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
           P+AT+ IP++I LIQ ++  G+AY  + ++ +     P+YG  S R++++ + G   RV 
Sbjct: 113 PKATDVIPEIIQLIQTLVDQGYAYAVDGDVYYAVDRFPDYGKLSGRQLEQMQAGASGRVD 172

Query: 181 E-KYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           + +  K++P DF LWK +   E      W+SPWG+GRPGWHIECSAM    LG   DIH 
Sbjct: 173 DTEPKKRHPLDFALWKAAKSEELSVYQPWDSPWGKGRPGWHIECSAMVRKELGHTIDIHC 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DLIFPHHENEIAQS  A R +  A+ W+HNGF+N++G KMSKS GNF TI   L + 
Sbjct: 233 GGMDLIFPHHENEIAQSEAATRAD-LAHYWLHNGFVNIQGEKMSKSLGNFKTIRAFLNS- 290

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQ 339
                     ++RL +L  HYR+PIDF+ + +T A+                    +W  
Sbjct: 291 -----GVDPMMLRLFVLQAHYRKPIDFSDETITAAQHSWQTLQEGLRFGYDYGQQLRWED 345

Query: 340 TSTS------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
              S             G       +A+ +DLNT SAI  L +LA+E  +  +L+     
Sbjct: 346 YQDSSFGDPACMRIPDSGAEIERFRAAMDDDLNTASAIAVLFELAKELRREGNLISHAGQ 405

Query: 384 -------------IFNASAHILGIEVCKE----HLNKNISIAIEKLVQERLILLKMKKFS 426
                             A +LG+EV  E      +      IE L+Q+R    K K ++
Sbjct: 406 PQLDPQELRSIWQTLVCLAQVLGLEVSPETEVTADDGLSEAEIEDLIQQRQAARKAKNYA 465

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             D IR +L++KG  L D K+       T+W +
Sbjct: 466 EGDRIRNELKTKGITLIDQKDGS-----TKWIR 493


>gi|270291200|ref|ZP_06197423.1| cysteinyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280596|gb|EFA26431.1| cysteinyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 472

 Score =  560 bits (1443), Expect = e-157,   Method: Composition-based stats.
 Identities = 177/492 (35%), Positives = 252/492 (51%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT+ R    F+ +    + MYVCGPTVY++ HIGNAR +I FD + R L Y   + 
Sbjct: 2   IKLYNTMTRSKEVFKPLVDQQVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A+ E      N  +  +  +    F +D   L     T  PR
Sbjct: 61  -VRFVSNFTDVDDKMIKAAQAE------NITVPELAERYIAAFKEDVQALNVEPATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I  +I  + ++I   +AY     + +      NYG+ S + IDE + G        
Sbjct: 114 ATENIADIIAFVADLIEKDYAYVVEGNVYYRARRFKNYGALSHQNIDELEQGASQHINDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  WE+PWG+GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETMQKEDPIDFALWKAAKPGEIAWEAPWGKGRPGWHIECSVMSTKYLGDTFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS     + + A  W+HNGF+ +  +  KMSKS GNF+T+++L+      
Sbjct: 234 QFPHHENEIAQSEARTGV-QFARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLI------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA 350
            +     V+R  M  T YR+PI +T   L +A+  L K          +  T+ G  DPA
Sbjct: 287 -KQVNPQVLRFLMSTTQYRKPIQYTETSLQDAKNNLEKLQNAYVNLNYRLQTADGAADPA 345

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                       ++A+ +D N  + I  +++ AR      +           L   F   
Sbjct: 346 VDQQAAALQADFVAAMDDDFNAQNGITVVYEFARLINVYSEQATVNHEQIARLAKQFAEM 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A I GIE+            IE LV++R      + F ++D +R QL+  G ILED    
Sbjct: 406 AAIFGIELA-TATEAPADEKIEALVKQRDAARAARDFETSDRLRDQLKEMGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 462 ---PQGTRWRKK 470


>gi|160872079|ref|ZP_02062211.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
 gi|159120878|gb|EDP46216.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
          Length = 466

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 179/487 (36%), Positives = 262/487 (53%), Gaps = 53/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K   F+ +    + MYVCG TVYDF HIG+AR ++VFDV+ R L+    + 
Sbjct: 2   LKIYNTLTQKKEAFKPMIAKKVGMYVCGMTVYDFCHIGHARVVVVFDVILRYLKMQGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII+RA++       N++   +T +  +   +D  RL  L P  +P+
Sbjct: 61  -VNYIRNITDIDDKIIKRAQEN------NESPFELTQRMIKAMHEDFNRLNTLPPNAEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ I  +I LIQ ++   +AY + N +I FD      YG  + + + + + G RV    
Sbjct: 114 ATDAIVYIIALIQRLVDKAYAYRSENGDICFDVKKFKTYGDLAHQNVQKLRRGLRVAVDI 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK++   EP WESPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+FP
Sbjct: 174 TKKDPLDFVLWKKAKSGEPSWESPWGPGRPGWHIECSAMSMAALGEHFDIHGGGLDLVFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HH+NEIAQS      +K  N WIH GF+ ++ +KMSKS GNF T+ ++L       + +P
Sbjct: 234 HHQNEIAQSEGVT-DKKFVNTWIHVGFVQIDRQKMSKSLGNFFTLRDVL-------KQYP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGIIDP 349
           A V+R  ++ +HYR PI ++++ L  A+  L +   +                S      
Sbjct: 286 AEVVRYFLISSHYRSPIQYSLENLQAAQAALQRLYTSLRGLVGKGPQKFVLEESSKEYQE 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK--- 398
               A+ +D NT  A+  L +LAR   +  +                A +LGI   +   
Sbjct: 346 KFEHAMNDDFNTPDALAILFELARRINRLRETNSKHAQRDANCLQYLASLLGILQQEPEQ 405

Query: 399 -----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                +  + ++   I  L+  R      K +  AD IR +L +   +LED         
Sbjct: 406 FLKLNQEKDPHLVEKINGLMNARNHARAAKNWQEADRIRDELLALNIVLEDTTT------ 459

Query: 454 MTRWKQK 460
            T+W++K
Sbjct: 460 GTQWRRK 466


>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 465

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 256/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASAY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTDRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQAEGANG-NTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            + +   V+R  +L +HYR  ++++   L +A   L++             A        
Sbjct: 287 -KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSESH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
                 A+ +D NT  A+  L +LA E  K     L+    A   ++G+     H     
Sbjct: 346 GQRFREAMNDDFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAFLQG 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +   +  +E  ++ R +    + F+ AD IR  L + G +LED         +T
Sbjct: 406 GVGAAADGLDAAEVEARIEARRVAKAERDFARADGIRADLLAAGIVLEDKPGG-----VT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|126654401|ref|ZP_01726146.1| cysteinyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589151|gb|EAZ83335.1| cysteinyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 466

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 171/489 (34%), Positives = 250/489 (51%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R  +Y   
Sbjct: 1   MSIQIFNSLSRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDKII+ A +      + + +  +T +    + +D T L C      
Sbjct: 61  D--VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+  +I  IQ +I  G+AYE+  ++ + T     YG  S + +D+ K+G R+   
Sbjct: 113 PRVTEHMTDIIQFIQILIEKGYAYESAGDVYYRTRKFNGYGKLSHQSVDDLKIGARIEAG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +  DF LWK + P E  WESPWG GRPGWHIECS M+  +LG   DIH GG DL F
Sbjct: 173 EKKDDALDFALWKAAKPGEIFWESPWGNGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNG++N++  KMSKS GNFI +N++        +  
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIR-------KQI 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
              V+R  ML  HYR PI+F    +  A   L +      +                   
Sbjct: 285 DPQVLRFFMLSVHYRHPINFAKDLVEAAAAGLERIRTAYNNVKHRLTTTVSLGDHSDEWL 344

Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                       A+ +D NT + I  L +LAR +                 +  F     
Sbjct: 345 NKITEQKAQFEEAMDDDFNTANGISVLFELARIANIYLNETNTCKKVLETFIETFEVLGD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI+  KE    +  I    L+QER+   K + F+ +D IR  L+++G ILED +    
Sbjct: 405 VLGIKFAKEEELLDEEID--ALLQERVEARKNRDFARSDEIRDHLQAQGIILEDTR---- 458

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 459 --QGTRWKR 465


>gi|222152121|ref|YP_002561281.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121250|dbj|BAH18585.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 469

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 172/483 (35%), Positives = 256/483 (53%), Gaps = 49/483 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + I +YNTL R   +F  I+   ++MYVCGPTVY++ HIGNARP I FDV+ R   Y   
Sbjct: 5   RMITLYNTLTRSKEKFVPIEEGRVKMYVCGPTVYNYIHIGNARPAISFDVVRRYFEYRGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV N TD+DDK+I+ A +      + + +  I  +  + + +DT  L C   TH 
Sbjct: 65  E--VDYVSNFTDVDDKLIKAANE------LGETVPEIADRFIEAYFEDTHALNCKTATHH 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR  +H+  +I  I  +I  G+AYE+  ++ F T     YG  S + IDE K+G R+   
Sbjct: 117 PRVMDHMEDIIEFIDELIKKGYAYESGGDVYFRTRKFEGYGKLSHQSIDELKVGARIQAG 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +  DF LWK + P E  W+SPWG GRPGWHIECS M+  +LG   DIH GG DL F
Sbjct: 177 ELKDDALDFALWKTAKPGEISWQSPWGEGRPGWHIECSVMAKKHLGDSIDIHAGGSDLTF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A      AN W+HNGF+N++  KMSKS GNFI +++++       +  
Sbjct: 237 PHHENEIAQSE-AHNDTTFANYWLHNGFINIDNEKMSKSLGNFILVHDII-------KEI 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  M+  HYR PI++ ++ +  A+  L +      +                   
Sbjct: 289 DPNVLRFFMISVHYRNPINYNMELVASAKAGLERIQNAYQAMKERQAISVDVVNHAETIL 348

Query: 345 --GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI 391
               I     +A+ +D NT +AI A ++LA+++   +             + +F   + +
Sbjct: 349 VIDNILKQFETAMDDDFNTANAITAWYELAKQANIYNQNPSTDLKVINRFIEVFEVFSEV 408

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LG+++  +  +  +   +E+L++ER    K K F  AD IR  L+++  ILED       
Sbjct: 409 LGVKL--DTSDTLLDEEVERLIEERQEARKNKDFKRADEIRDALKAQNIILEDTAQGVRY 466

Query: 452 QRM 454
           +R 
Sbjct: 467 KRG 469


>gi|304385485|ref|ZP_07367830.1| cysteine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328692|gb|EFL95913.1| cysteine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 472

 Score =  559 bits (1442), Expect = e-157,   Method: Composition-based stats.
 Identities = 176/492 (35%), Positives = 252/492 (51%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT+ R    F+ +    + MYVCGPTVY++ HIGNAR +I FD + R L Y   + 
Sbjct: 2   IKLYNTMTRSKEVFKPLVDQQVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A+ E      N  +  +  +    F +D   L     T  PR
Sbjct: 61  -VRFVSNFTDVDDKMIKAAQAE------NITVPELAERYIAAFKEDVQALNVEPATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT +I  +I  + ++I   +AY     + +      NYG+ S + IDE + G        
Sbjct: 114 ATENITDIIAFVADLIEKDYAYVVEGNVYYRARRFKNYGALSHQNIDELEQGASQHINDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W++PWG+GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETMQKEDPIDFALWKAAKPGEIAWKAPWGKGRPGWHIECSVMSTKYLGDTFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS     + + A  W+HNGF+ +  +  KMSKS GNF+T+++L+      
Sbjct: 234 QFPHHENEIAQSEARTGV-QFARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLI------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA 350
            +     V+R  M  T YR+PI +T   L +A+  L K          +  T+ G  DPA
Sbjct: 287 -KQVNPQVLRFLMSTTQYRKPIQYTETSLQDAKNNLEKLQNAYVNLNYRLQTANGAADPA 345

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                       ++A+ +D N  + I  +++ AR      +           L   F   
Sbjct: 346 VDQQAAALQADFVAAMDDDFNAQNGITVVYEFARLINVYSEQATVNHEQIARLAKQFAEM 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A I GIE+            IE LV++R      + F ++D +R QL+  G ILED    
Sbjct: 406 AAIFGIELA-TATEAPADEKIEALVKQRDAARAARDFETSDRLRDQLKEMGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 462 ---PQGTRWRKK 470


>gi|319946262|ref|ZP_08020502.1| cysteine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319747644|gb|EFV99897.1| cysteine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 450

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 180/472 (38%), Positives = 248/472 (52%), Gaps = 39/472 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMSRDLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E            +  K    F +D T L     T
Sbjct: 61  GYE--VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PR    +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G    
Sbjct: 113 RHPRVVEFMDDIIRFVTDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGR 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  WESPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEVSWESPWGPGRPGWHIECSVMSTGILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA----- 350
                   V+R      HYR+PI+FT + + +AE  L     T      G +DPA     
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLQSF 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKN 404
               ++A+  D+N  + I  + +LA+     H   D+         + GI   +E L  +
Sbjct: 345 VDKFVAAMDEDINAANGITVVFELAKWINSGHYDQDVKEALAKMLEVFGIVFVEEVLAAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               IE L+ ER      K F+ AD IR QL ++G  L D K    G R TR
Sbjct: 405 ----IEALIAERQEARANKDFARADEIRDQLAAQGIKLLDTK---EGVRWTR 449


>gi|289665721|ref|ZP_06487302.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 476

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 196/496 (39%), Positives = 268/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++NTL R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNTLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLSALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +      N  IS IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ------NVPISTITDRFAAIYRQDMAALGVMPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      +D            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALDADGGSDVGSSKT 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARES-----------------TKNHDLLPIFNASA 389
               V +AL +DLNT  A+  +  +A E+                  + H +      + 
Sbjct: 346 IPAEVEAALDDDLNTPLALSVIASIAAEARALRNELVHGGEPLGRMNELHAVRAKLLGAG 405

Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             LG+             +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERNAAKKAKDFARADAIRKQLADQGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|332970727|gb|EGK09707.1| cysteine--tRNA ligase [Desmospora sp. 8437]
          Length = 462

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 171/486 (35%), Positives = 251/486 (51%), Gaps = 56/486 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++NT  RK+  F+      + MYVCGPTVY++ HIGNAR  + FDV+ R LRY   +  V
Sbjct: 1   MFNTQTRKLEPFRPQHDRKVAMYVCGPTVYNYIHIGNARVFVFFDVVRRYLRYKGYD--V 58

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYV+N TD+DD++IE A++E      N  +  +  +  + +  D   L        P+AT
Sbjct: 59  TYVQNFTDVDDRLIESAKRE------NTTVKELAERYIRAYFDDMDALGVQRADVHPKAT 112

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            HIP+M   I  +I  G+AYE   ++ +      +YG  S + ++E   G RV     K+
Sbjct: 113 EHIPEMQEAILTLIDKGYAYEREGDVYYRALRKEDYGKLSGQSVEELNAGARVEVNEKKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
            P DF LWK++ P E  WESPWGRGRPGWHIECSAMS  YLG   D+H GG+DL FPHHE
Sbjct: 173 TPLDFALWKKAKPGEISWESPWGRGRPGWHIECSAMSRKYLGDTLDVHAGGMDLCFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQS      +     W+HNG++N+   KMSKS GN + ++EL E        +    
Sbjct: 233 NEIAQSEAWT-EKPFVRYWLHNGYINMGNEKMSKSLGNVVRVHELRE-------QYAPRA 284

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP-------- 349
           +R  +L  HYR PI F+ + + + E  L ++            +  +G  +P        
Sbjct: 285 LRYFLLSAHYRNPISFSHEAIRQIEGSLERFDTAVTNLHHRMGAAQEGEAEPEVRERLAS 344

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKN--------HDLLPIFNAS----AHILGI 394
                 +A+ +DLNT + I  LH+  + + +           L  + +        ILG+
Sbjct: 345 LTGEFEAAMDDDLNTANGISVLHEAVKFANETVARSVVPKGSLAMLLDWIHRFGGEILGL 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E    +++  IE L++ER      + F  AD IR +L ++G ILED        + 
Sbjct: 405 VTAGEE--DSLAGEIEALIEERQQARAARDFKRADAIRDRLAAQGIILEDT------PQG 456

Query: 455 TRWKQK 460
            RW++K
Sbjct: 457 VRWRRK 462


>gi|329925602|ref|ZP_08280443.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328939731|gb|EGG36073.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 468

 Score =  559 bits (1441), Expect = e-157,   Method: Composition-based stats.
 Identities = 171/490 (34%), Positives = 249/490 (50%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F A +P  +++YVCGPTVYD+ HIGNARPMI FDV+           
Sbjct: 3   LQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQG--N 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I +A Q          +  +  K    + +D   L     T  PR
Sbjct: 61  DVNYVVNFTDVDDKMIRKAEQ------TGTTVPEVAEKFINAYYEDLDGLGIPRATLNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+++  +I  IQ +I    AYE   ++ + T    +YG  S++ +DE + G R+     
Sbjct: 115 VTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL FPH
Sbjct: 175 KENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE E+AQS      +  AN W+HNG++ +   KMSKS GN + + EL E        +  
Sbjct: 235 HECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QYTK 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------------SKGII 347
             +R  ML THYR P++++ + + +A+  + +    +                  S+ + 
Sbjct: 287 EAVRYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGTAIGSKDDQVSQDVA 346

Query: 348 DP------AVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAH 390
           D            + +D NT  AI A+ + A E+ +            H++L  FN    
Sbjct: 347 DKISAVLVEFHEKMQDDFNTPDAITAMFQWASEANQLLKEASIPAANLHEVLRAFNEMNS 406

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +L I       ++ +   IE L+ ER+   K K ++ AD IR +L  +G +LED      
Sbjct: 407 VLRI--VNTGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLEDT----- 459

Query: 451 GQRMTRWKQK 460
             +  RW++K
Sbjct: 460 -AQGMRWRRK 468


>gi|261409541|ref|YP_003245782.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261286004|gb|ACX67975.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 468

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 171/490 (34%), Positives = 248/490 (50%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F A +P  +++YVCGPTVYD+ HIGNARPMI FDV+           
Sbjct: 3   LQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQG--N 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I +A Q          +  +  K    + +D   L     T  PR
Sbjct: 61  DVNYVVNFTDVDDKMIRKAEQ------TGTTVPEVAEKFINAYYEDLDGLGIPRATLNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+++  +I  IQ +I    AYE   ++ + T    +YG  S++ +DE + G R+     
Sbjct: 115 VTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL FPH
Sbjct: 175 KENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE E+AQS      +  AN W+HNG++ +   KMSKS GN + + EL E        +  
Sbjct: 235 HECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QYTK 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------------SKGII 347
             +R  ML THYR P++++ + + +A+  + +    +                  S+ + 
Sbjct: 287 EAVRYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGTAIGSKDDQVSQDVA 346

Query: 348 DP------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
           D            + +D NT  AI A+ + A E+              H++L  FN    
Sbjct: 347 DKISAVLVEFHEKMQDDFNTPDAITAMFQWASEANQLLKEASIPAADLHEVLRAFNEMNG 406

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +L I       ++ +   IE L+ ER+   K K ++ AD IR +L  +G +LED      
Sbjct: 407 VLRI--VNNGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLEDT----- 459

Query: 451 GQRMTRWKQK 460
             +  RW++K
Sbjct: 460 -AQGMRWRRK 468


>gi|206972194|ref|ZP_03233141.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206732768|gb|EDZ49943.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 465

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 172/489 (35%), Positives = 250/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              +IR  ML  HYR PI+F+ + L      L +      +                   
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 SEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ KE L       +    Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKERNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|90420879|ref|ZP_01228784.1| cysteine--tRNA ligase [Aurantimonas manganoxydans SI85-9A1]
 gi|90334854|gb|EAS48626.1| cysteine--tRNA ligase [Aurantimonas manganoxydans SI85-9A1]
          Length = 494

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 245/494 (49%), Positives = 320/494 (64%), Gaps = 42/494 (8%)

Query: 3   KKIKIYNTLERKITEFQAID---PSN------IRMYVCGPTVYDFAHIGNARPMIVFDVL 53
           + + ++NT++R   EF+ +D   P        +RMYVCGPTVYD+AHIGNARP+IVFDVL
Sbjct: 6   RGLTLWNTMKRAKEEFRPLDWQDPGKAEAGRHVRMYVCGPTVYDYAHIGNARPVIVFDVL 65

Query: 54  YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           YRLLR+ YG   VTYVRNITD+DDKI  RA +++P +P+N AI+ +T     QF  D   
Sbjct: 66  YRLLRHLYGADHVTYVRNITDVDDKINRRAARDYPDLPLNAAIAKVTQATADQFHADVAA 125

Query: 114 LACLAPTHQPRATNHI------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
           L CL P H+PRAT+ +        M+ +I  +I  GHAYEA  E++FD +S+ +YG  S 
Sbjct: 126 LGCLPPDHEPRATDFVTGRSDGHDMVSMIATLIEKGHAYEAGGEVLFDVTSMADYGQLSN 185

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR-------------GRPG 214
           RK+DEQ+ G R+  + HK+NP DF+LWK S+  EPGWE+PWGR             GRPG
Sbjct: 186 RKLDEQRAGARIAVEGHKRNPGDFVLWKLSSEGEPGWEAPWGREAWEASGRTGMPKGRPG 245

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECSAMS  YLG+ FDIHGGGLDLIFPHHENEIAQS CA      A +W+HNG+L LE
Sbjct: 246 WHIECSAMSEAYLGQTFDIHGGGLDLIFPHHENEIAQSRCAHGTAAMAQVWMHNGYLQLE 305

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           GRKMSKS+GNF+TI++LL T +FG RSW   V+RLAMLMT YREPIDF+V+RL EAE  L
Sbjct: 306 GRKMSKSDGNFVTIHDLLHTDRFGRRSWAGAVLRLAMLMTQYREPIDFSVKRLEEAEEAL 365

Query: 335 SKWPQTST--SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           + W +     +        L+AL +DL + +AI  LH L +             AS  ++
Sbjct: 366 AGWARAVADVAPSAPSERFLAALSDDLASAAAIAELHALRKGDP------AALRASLDLI 419

Query: 393 GIEVC------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           GI+V        +      + AI   + ERL LL+ K F+ AD IR +L ++G  L+D K
Sbjct: 420 GIDVAGYLAATSDLAAPVPADAIAARIAERLDLLRGKNFAEADRIRDELLAEGIQLKDGK 479

Query: 447 NPDNGQRMTRWKQK 460
           +PD G+R+T W+ K
Sbjct: 480 DPDTGERITTWEMK 493


>gi|319399722|gb|EFV87971.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 466

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 167/481 (34%), Positives = 258/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I R+++      +N+++  I  K  + F +D   L     T   R
Sbjct: 61  -VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+ ++I  I+ ++  G+AYE++ ++ F T     YG  S + +D+ K+G R+     
Sbjct: 114 VMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGEQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  W SP+G+GRPGWHIECS M+ H LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +     AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNHA-PFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+R  M+  HYR PI++ ++ +  A   L +   +       +                
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREEIATDLEEQSEYIQQI 345

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA----SAHILG 393
                   + + +D NT +A+ A + LA+ + K       +  +L  F       + +LG
Sbjct: 346 DKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +  +   + +   IE+L++ER    K K F+ AD IR  L+++  ILED       +R
Sbjct: 406 VPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|27378901|ref|NP_770430.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|61216344|sp|Q89NP8|SYC_BRAJA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|27352051|dbj|BAC49055.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 460

 Score =  559 bits (1440), Expect = e-157,   Method: Composition-based stats.
 Identities = 219/476 (46%), Positives = 293/476 (61%), Gaps = 39/476 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+TL ++   F  +D +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MELRLYDTLTKEKRTFVPLDANNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKI +RA ++ P +P+N+AI  +T +  +QF  D   L  L P+ +
Sbjct: 61  EAHVKYVRNITDVDDKINDRAARDFPGLPLNEAIREVTEQTGKQFHADVDALGALRPSVE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-------SSIPNYGSFSRRKIDEQKM 175
           PRAT HI +M  +I+ ++  G AY A + ++F         S++P YG+ S R +DE   
Sbjct: 121 PRATEHIGEMREIIERLVAGGFAYVAEDHVLFSPQAMNAANSTLPRYGALSNRSLDEMVA 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
           G RV    +KK   DF+LWK S P EP W SP G   +GRPGWHIECSAM+  +LG+ FD
Sbjct: 181 GARVDVAPYKKGSTDFVLWKPSKPGEPSWPSPAGIAAQGRPGWHIECSAMAWKHLGEYFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHENE+AQ+CCA   E+ AN W+HNGFL +E  KMSKS GNFITI+ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQTCCAFHRERMANYWMHNGFLQVESEKMSKSLGNFITIHELL 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-- 350
                    WP  V+RL ML THYR PID+T++ L E+   L  W + +       PA  
Sbjct: 301 AD-------WPGEVLRLNMLKTHYRSPIDWTMKSLEESAKTLDDWYRVAADVDPGRPAAS 353

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEHLN 402
           V+  L +DLNT  AI ALH L     +N D+      S  +LG         E  K+  +
Sbjct: 354 VVEPLLDDLNTSLAIAALHGL-----RNSDV-SALAGSLRLLGFLSESAAQWEDRKQKAS 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +E+L+ ER      K F  +D IR QL + G  ++D K        T W+
Sbjct: 408 GVDAGEVERLISERTAARGRKDFKESDRIRDQLAAMGVAIKDSK------EGTTWE 457


>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 460

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 173/481 (35%), Positives = 257/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+   F+ I P  + MYVCG T+YD+ HIG+AR  + FD + R LR    + 
Sbjct: 2   LQIFNTLTRQKEAFKPIQPGKVGMYVCGVTIYDYCHIGHARTYVAFDTMVRYLRSQGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKII RA +       N++   + ++ T+   +D   L  L P  +P 
Sbjct: 61  -VTYVRNITDVDDKIIRRAAEN------NESCEALVARFTEAMYQDFDALNLLRPDIEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+ ++I +IQ ++  GHAY  +  ++ F+  +  +YG  SR+ +++ + G RV    
Sbjct: 114 VTGHMAEIIDIIQTLVNKGHAYVTDAGDVWFEVKTFDDYGKLSRQDLEQLQSGARVEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK + P EP W SPWG GRPGWHIECSAM+  +LGKVFDIHGGG DL+FP
Sbjct: 174 SKRNPMDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H+G + +   KMSKS  NF TI E+L       + + 
Sbjct: 234 HHENEVAQSCCAHDTN-YVNYWVHSGMVQVNKEKMSKSLNNFFTIREVL-------KQYQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSA 354
           A  +R  +L +HYR  ++++ + L +A   L +                         +A
Sbjct: 286 AESVRYFLLSSHYRSQLNYSEENLNQAHAALERLYTALRGVTPATELNLDNDHVARFQAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE------VCKE 399
           + +D NT  A+  L  LARE     +         L  +      ++G+         + 
Sbjct: 346 MNDDFNTAEALPVLFDLARELNITKEDGESEQAAQLAGLMRYLGGVMGLLEQAPEAFLQG 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + +    IE L++ R      K +++AD  R +L + G +LED      G   T W++
Sbjct: 406 GGDDDEVAKIEGLIKARNDARASKDWAAADAARDELTAMGIVLED------GAGGTSWRR 459

Query: 460 K 460
           K
Sbjct: 460 K 460


>gi|289671266|ref|ZP_06492341.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 476

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 196/496 (39%), Positives = 268/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++NTL R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNTLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLSALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +      N  IS IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQ------NVPISTITDRFAAIYRQDMAALGVMPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      +D            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALDADGGSDVGSSKT 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARES-----------------TKNHDLLPIFNASA 389
               V +AL +DLNT  A+  +  +A E+                  + H +      + 
Sbjct: 346 IPAEVEAALDDDLNTPLALSVIASIAAEARALRNELVHGGEPLGRMNELHAVRAKLLGAG 405

Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             LG+             +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFARGTDAGDDARITALVEERNAAKKAKDFARADAIRKQLADQGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|302385700|ref|YP_003821522.1| cysteinyl-tRNA synthetase [Clostridium saccharolyticum WM1]
 gi|302196328|gb|ADL03899.1| cysteinyl-tRNA synthetase [Clostridium saccharolyticum WM1]
          Length = 467

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 183/490 (37%), Positives = 254/490 (51%), Gaps = 59/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF +++P  I+MYVCGPTVY+  HIGNARP+IVFD + R   Y   E 
Sbjct: 1   MKIYNTLSRQKEEFVSLEPGKIKMYVCGPTVYNLIHIGNARPIIVFDTVRRYFEYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TDIDDKII++A +E            I+ +  ++  KD   L     T  P 
Sbjct: 60  -VNFVSNFTDIDDKIIKKAIEEGVDAN------TISKRYIEECKKDMESLNIKPATKNPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  M+ +I+ +I  GHAYEA +  + F T +   YG  S + +++ + G R   V 
Sbjct: 113 ATEEICGMLDMIEKLIASGHAYEAADGTVYFRTKTFGEYGKLSHKNLEDLQSGFREIKVT 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++P+DF+LWK     EP WESPW +GRPGWHIECS MS  YLG   DIH GG DL
Sbjct: 173 GEDGKEDPSDFVLWKPKKEGEPYWESPWCQGRPGWHIECSVMSKKYLGDQIDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  E  A  W+HNGFLN++ +KMSKS GNF T+ ++       G 
Sbjct: 233 IFPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVRDI-------GE 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
            +   V+R  ML  HYR PI+F+   +  ++  L +          ++            
Sbjct: 285 KYDLQVLRFFMLSAHYRSPINFSADLMEASKNGLERILTAVDKLKSLEATATTEKLLEGE 344

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASA 389
                        +A+ +D NT  AI  + +L + S    +          L        
Sbjct: 345 DNNSVQELVSKYEAAMDDDFNTADAISVIFELVKLSNSTANGDSSREYVTYLRDTIERLC 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LGI    E   + +   IE ++  R    K K F+ AD IR +L  KG +LED +   
Sbjct: 405 EVLGI--ITEKEEEILDDEIEAMIAGRQQARKDKNFALADEIRGKLLEKGIVLEDTR--- 459

Query: 450 NGQRMTRWKQ 459
                 +WK+
Sbjct: 460 ---EGVKWKR 466


>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 463

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 190/482 (39%), Positives = 260/482 (53%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++KIYNTL R    F  I+P  +R+YVCG TVYD+ HIG+AR ++VFD++ R LR    
Sbjct: 2   SELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRNITDIDDKII+RA      +   + I+ +T++      +D   L    P H+
Sbjct: 62  E--VTYVRNITDIDDKIIKRA------VENGETIAQLTNRFIDAMNEDAAALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ LI  +  +G AY+A + ++ +     P YG  S + +D+ + G RV  
Sbjct: 114 PRATQYVPQMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDV 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK + P EP    W+SPWG GRPGWHIECSAMSS  LG  FDIHGGG 
Sbjct: 174 NTGKRDPLDFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++L      
Sbjct: 234 DLQFPHHENEIAQSEGAH-QHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------IIDPA-- 350
            + +   V+R  +L  HYR P++++   L +A   L++               + D A  
Sbjct: 287 -KKYDPEVLRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALKDVPPQAGGLVADEAHA 345

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCK-------- 398
             +  AL +D NT  AI  L +LA E  ++          A A ILG+   +        
Sbjct: 346 VRLADALNDDFNTPVAIAVLFELANEVNRSRSPVQARQLKALAGILGLLQREPGEYLKGG 405

Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                      IE L+  R      K F+ AD IR +L   G ILED         +T W
Sbjct: 406 VAAAEGLGEAEIEALIAARKAAKAGKNFAEADRIRAELTEAGIILEDKPGG-----LTEW 460

Query: 458 KQ 459
           ++
Sbjct: 461 RR 462


>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 505

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 189/509 (37%), Positives = 271/509 (53%), Gaps = 75/509 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+ +YNT+  KI EF+ I+   ++MYVCGPTVY++ H+GNARP+++FD+L R  +Y  
Sbjct: 9   ENKMNLYNTMSNKIEEFKPIEEGKVKMYVCGPTVYNYIHLGNARPVVIFDILARYFKYRG 68

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  VTYV+N TD+DDKII+RA +E        +   +T K  Q F +DT  L  L    
Sbjct: 69  YD--VTYVQNFTDVDDKIIKRANEE------GISPKEVTEKYIQGFFEDTELLNILQDIK 120

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +P+ T ++P++I  I+ +I +G+AYE +  + FD     +YG  S +KIDE ++G RV  
Sbjct: 121 RPKVTENMPEIIETIEKLIENGYAYEIDGNVFFDVKKYEDYGKLSNQKIDELEIGARVDI 180

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K NP DF LWK+    EP W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DLI
Sbjct: 181 MEIKNNPLDFALWKKKKEGEPYWDSPWGQGRPGWHIECSAMSKKYLGETFDIHGGGQDLI 240

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA      A  W+HNGF+ + G KMSKS GNF  + E+L         
Sbjct: 241 FPHHENEIAQSKCAYHGH-FAKYWVHNGFVQVNGDKMSKSTGNFFLLREILG-------K 292

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL--------------LSKWPQTSTSKGI- 346
           +   VIRL +L THYR+P++F+ + +   +                L K      S+ + 
Sbjct: 293 FSGNVIRLFILSTHYRKPVNFSFEDMENTKKTLQNVISSIRRFEKSLEKLSSGIKSEDVS 352

Query: 347 -----------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------ 383
                             D   + A+  D+NT  A+  +    RE+ +  D +       
Sbjct: 353 DEKINEINKVFKEKIKSFDVKFIGAMDEDMNTPQALSTIFDQIRETNRFCDDIEKILDKE 412

Query: 384 -------IFNAS-----------AHILGI---EVCKEHLNKNISIAIEKLVQERLILLKM 422
                  +F A              +LG+   +  KE+ +      IE L++ R    K 
Sbjct: 413 RNDSSFLLFEALELSYKNLKTKIEDVLGVLLMDEKKENKDDLSKNLIELLIKIRTEARKE 472

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNG 451
           K FS +D IR +L+  G  ++D K+    
Sbjct: 473 KNFSLSDEIRDELKKIGVEIKDNKDGTTS 501


>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 473

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 189/488 (38%), Positives = 273/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF       I +YVCG TVYD+ HIG+AR ++ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII+RA +        ++IS +TS+      +D  +L CLAP   P+AT
Sbjct: 64  KYVRNITDIDDKIIKRANEN------GESISELTSRFIDAMNEDFAKLGCLAPDVAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
           ++I QM  +I N++  G AY +N  ++ F+      YG  S RK+++ + G   RV  + 
Sbjct: 118 DYIDQMQAMIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIE-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDPA 350
             V+R  ++ +HYR P++++   L EA+  LS++  +              T    +   
Sbjct: 290 PEVVRYFIVSSHYRSPVNYSDVALKEAKNTLSRFYHSFKTYQAVYGDHLIETLDEALVER 349

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNA----SAHILGI--EVCKE 399
             +A+ +D NT  AI  L ++ +E  +     N +   I+ A      +ILG+  +   E
Sbjct: 350 FNAAMRDDFNTPEAIAVLFEINKELNRTVKEENAEQAAIYYATLRHLTNILGLVQQNVDE 409

Query: 400 HLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            L  +I           IE L+Q+R    K K+F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALGLSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|69245493|ref|ZP_00603457.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879803|ref|ZP_05659456.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257882529|ref|ZP_05662182.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891644|ref|ZP_05671297.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894121|ref|ZP_05673774.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614229|ref|ZP_05711999.1| cysteinyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559477|ref|ZP_05831658.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206628|ref|ZP_05921326.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289564989|ref|ZP_06445443.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293564124|ref|ZP_06678530.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293570060|ref|ZP_06681140.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614954|ref|ZP_06694845.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294618278|ref|ZP_06697860.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294623060|ref|ZP_06701947.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314940063|ref|ZP_07847246.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314942530|ref|ZP_07849369.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949364|ref|ZP_07852705.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314952824|ref|ZP_07855796.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993743|ref|ZP_07859088.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314994808|ref|ZP_07859940.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195744|gb|EAN10181.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257814031|gb|EEV42789.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818187|gb|EEV45515.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257828004|gb|EEV54630.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830500|gb|EEV57107.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074576|gb|EEW62897.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079121|gb|EEW66814.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289163196|gb|EFD11042.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587432|gb|EFF19316.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592240|gb|EFF23858.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291595494|gb|EFF26805.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291597533|gb|EFF28697.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604042|gb|EFF33570.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313590992|gb|EFR69837.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591843|gb|EFR70688.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313595058|gb|EFR73903.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598751|gb|EFR77596.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313640663|gb|EFS05243.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313644195|gb|EFS08775.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 470

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 177/494 (35%), Positives = 259/494 (52%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK  EF  I   ++ MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   IKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VDFVSNFTDVDDKIIRTANE------LGITAPEVADRFIRAFEEDTKALNVEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +H+P ++  IQ ++  G+AYE++ ++ + T    NYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +K AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPA 350
           ++    V+R  M  T YR PI ++   + EA   L +   T         + S+ + D A
Sbjct: 286 KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADDA 345

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                        +  + +D N  + I  +++LA+      D              +F+ 
Sbjct: 346 DKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFSQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L++ER      + F  +D IR  L+ KG +LED   
Sbjct: 406 WLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFVRSDEIRDLLKEKGILLEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 495

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 184/515 (35%), Positives = 263/515 (51%), Gaps = 82/515 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L RK  EF  I+   +RMYVCG TVYD  H+G+AR M+VFDV+ R LR    E 
Sbjct: 2   LRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA ++       ++I  +T++  Q   +D   L  L P  +PR
Sbjct: 61  -VMYVRNITDIDDKIIHRANEK------GESIHALTARYIQALHEDEASLQILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  ++ +++ ++  G+AY+  N +I +D S    YG+ S + +++ + G RV    
Sbjct: 114 ATESMEAILAMVRQLLEQGYAYQGENGDIYYDVSHFEGYGALSGKHLEDLRAGERVQVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+HNGF+ L+  KMSKS GNF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEAATGSK-FVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLE-------HYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTS 343
             V+R  +L +HYR P++++ Q+L  A+  +++                      +    
Sbjct: 286 PEVLRYFILSSHYRSPLNYSKQQLDTAKAAMTRLYTALRGIPRGDDRASAQGLSWEFVDG 345

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHILGI 394
           +         A+ +D NT  A+  L+++     +            L  +  A   ILG+
Sbjct: 346 EDPFILRFREAMDDDFNTPEALALLNEVRHALNRARKGGDTEKGQSLAVLLRALGGILGL 405

Query: 395 EVCKEH----------------------LNKNISIA--------IEKLVQERLILLKMKK 424
              +                        L    S          IE+LV +R +  K K 
Sbjct: 406 LAHEPEQFLRDPRQMVVVSDTAKTTSLSLTSQTSTEKVVLSHDGIEQLVAQRTVARKNKD 465

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ++ AD IR  L+ +G  LED          T W++
Sbjct: 466 WAEADRIRGILKDQGITLEDTAA------GTLWRR 494


>gi|30018360|ref|NP_829991.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218235383|ref|YP_002364939.1| cysteinyl-tRNA synthetase [Bacillus cereus B4264]
 gi|33301673|sp|Q81J59|SYC_BACCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735047|sp|B7HJ28|SYC_BACC4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29893900|gb|AAP07192.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|218163340|gb|ACK63332.1| cysteine--tRNA ligase [Bacillus cereus B4264]
          Length = 465

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 172/489 (35%), Positives = 249/489 (50%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 AEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ KE L       +    Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKERNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|109894909|sp|Q2RFM3|SYC_MOOTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 476

 Score =  558 bits (1439), Expect = e-157,   Method: Composition-based stats.
 Identities = 187/497 (37%), Positives = 260/497 (52%), Gaps = 64/497 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL  +  EF  ++P  +RMYVCGPT Y++ H+GNARPM+VFD L R L Y   + 
Sbjct: 1   MYLYNTLTGRKEEFTPVEPGRVRMYVCGPTTYNYIHLGNARPMVVFDTLRRYLEYRNYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I RAR+EH       A  +I  +  ++F KD   L     T  PR
Sbjct: 60  -VLYVQNFTDIDDKVINRAREEH------QAPLVIAERYIEEFFKDADALNVKRATLYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HI  +I  I  ++  G AY A+ ++ F+    P YG  S+R   E + G RV     
Sbjct: 113 VSQHIDAIIAAIATLVERGFAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARVEVNTS 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP WESPWG GRPGWHIECS M+  YLG  FDIHGGG DLIFPH
Sbjct: 173 KRNPLDFALWKAACPGEPSWESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+         A  W+HNGF+ +   KMSKS GNF  + ++L       + +  
Sbjct: 233 HENEIAQAEAQTGC-TFARFWLHNGFITVNQEKMSKSKGNFFLVRDIL-------KRFRP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
             +RL +L THYR PIDF    L  AE  L +   T    G                   
Sbjct: 285 LAVRLYLLATHYRSPIDFDDAGLLAAERGLERLENTRRLLGEARCQLTGTGAETTVPART 344

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------- 389
                    +    +SA+ +D NT  A+ AL+ LARE     +     + +A        
Sbjct: 345 SALAGRAEELRQEFISAMDDDFNTARALAALYDLAREINSYLNGTTTIDPAALRTAAITF 404

Query: 390 -----HILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                 +LG+  +  ++  ++ +S  ++ ++Q R    + + +++AD IR +L+  G +L
Sbjct: 405 EQLGGEVLGLFGQARQQVDDELLSGLMDLILQVRQEARQRRDWATADTIRDRLKELGIVL 464

Query: 443 EDYKNPDNGQRMTRWKQ 459
           ED        R  RWK+
Sbjct: 465 EDT------PRGPRWKR 475


>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 457

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 184/478 (38%), Positives = 253/478 (52%), Gaps = 46/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R   +F  I P ++RMYVCG TVYD  H+G+AR ++VFD++ R LR      
Sbjct: 2   LKIYNSLTRAKQDFVPITPGSVRMYVCGMTVYDHCHLGHARVLVVFDLVQRWLRASGL-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        ++I  +T++       D   L    P H+PR
Sbjct: 60  RVTYVRNITDIDDKIIKRALENK------ESIGDLTNRFIAFMNDDAAALGVEKPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++PQM+ LI  +  +G AY+  + ++ F     P YG  S + +D+ + G RV    
Sbjct: 114 ATEYVPQMLELIGRLEKNGLAYQVPDGDVNFSVRKFPGYGKLSGKALDDLRAGERVDVDG 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK +   EP W SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL FP
Sbjct: 174 TKEDPLDFVLWKHAREGEPSWPSPWGDGRPGWHIECSAMSSVLLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A +     N W+HNGF+ ++  KMSKS GNF TI E+L       R + 
Sbjct: 234 HHENEIAQSEGAHQCR-FVNYWMHNGFVRVDDEKMSKSLGNFCTIKEIL-------RKYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------AVLS 353
             V+R  +L  HYR P++++   L +A   LS+      +     P              
Sbjct: 286 PEVLRFFILRAHYRSPLNYSDTHLDDARQALSRLYTALRTANTDPPSIDWDEPHALRFRD 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------HILGIEVCKEHL 401
           A+ +D NT  A   L  LA E  ++                        +  ++      
Sbjct: 346 AMDDDFNTPEACAVLFDLAAELNRSKSATLAGQLRGLAGLLGLLGRDPQVF-LQAAPSEG 404

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +  +  IE L+ ER      K +++AD IR  L S G +LED      G   TRW++
Sbjct: 405 GELTAEQIESLISERAAAKAQKDYTAADRIRADLLSAGVVLED------GASGTRWRR 456


>gi|322388262|ref|ZP_08061866.1| cysteine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140934|gb|EFX36435.1| cysteine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 447

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 247/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLRDFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            + +K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVANKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVSDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ LET       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALET------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +AE  L     T          S          
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDSGELQAFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D NT + I  + ++A+       +  +     A   + GI   +E L++     
Sbjct: 346 VAAMDEDFNTANGITVVFEMAKWINSGNYDATVKEALTAMLEVFGIVFVEEVLDE----E 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEVLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|172035425|ref|YP_001801926.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171696879|gb|ACB49860.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 482

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 173/502 (34%), Positives = 248/502 (49%), Gaps = 66/502 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R    F  I+   ++MY CG TVYD+ H+G+AR  IV+DV+ R L++   
Sbjct: 1   MTLTVYNTLTRNKEPFTTIEEGKVKMYCCGITVYDYCHLGHARTCIVWDVVRRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTY++N TDIDDKI+ RARQE         +  ++ +  + + +D   L        
Sbjct: 61  D--VTYIQNFTDIDDKILNRARQEKT------TMEAVSERFIEAYFEDMECLNVAKADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  L+  +   G+AY +  ++ ++      YG  S RK+++ + G      
Sbjct: 113 PRATHTLNGIQRLVSELEAKGYAYASEGDVYYNVHQFKPYGKLSGRKLEDLQAGASGRVA 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E   KK+PADF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 VEDAEASKKKDPADFAVWKSAKPGEPAWDSPWGKGRPGWHIECSAMVRERLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI ELLE   
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVGGEKMSKSLGNFTTIRELLE--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
                +    +RL +L  HYR+P+DFT + L  A        +                 
Sbjct: 289 ----KFDPMAVRLFILQAHYRKPVDFTDEALEAATKGWQTLSEGLLFGFQQGSKLGFKEN 344

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
            S             + +D N    +  L ++A+E  K  +LL                 
Sbjct: 345 RSELLPEFIQRFQDTVDDDFNFAGGLAVLFEIAKELRKEGNLLVHQGKTETPSELLQKQW 404

Query: 383 PIFNASAHILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               A A +LG+E     V  E  +     AIE  +++R    K K F+ +D IR +L+ 
Sbjct: 405 QTLIALATVLGLEADSNPVNSEKSDGLDDAAIEAFIEKRKEARKNKNFAESDRIRDELKE 464

Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
           +G IL D         +T W +
Sbjct: 465 QGVILVDQPGG-----VTIWHR 481


>gi|310644226|ref|YP_003948985.1| translation initiation factor if-1 [Paenibacillus polymyxa SC2]
 gi|309249177|gb|ADO58744.1| Translation initiation factor IF-1 [Paenibacillus polymyxa SC2]
          Length = 467

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 167/491 (34%), Positives = 251/491 (51%), Gaps = 57/491 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNT+ R    F  ++P  ++MYVCGPTVYD+ HIGNARP+IVFDV+   L Y   
Sbjct: 1   MSLQIYNTMTRSREPFVPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I +AR+      +N  +  +  K    + +D   L   A +  
Sbjct: 61  D--VNYVVNFTDVDDKLIRKARE------LNMEVPAVAEKFIAAYHEDLAGLNVPAASIN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  +  +I  I++++  G+AYE + ++ + T    +YG  S + ++E + G R+   
Sbjct: 113 PRVTESMDLIIDFIKDLVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+N  DF+LWK + P E  W SPWG GRPGWHIECSAM+ HYLG   DIHGGG DL F
Sbjct: 173 ERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE E AQS      +  +  W+HNG++ ++  KMSKS GN I + +L    K      
Sbjct: 233 PHHECECAQSEVITG-KPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHK------ 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
               +R  ML THYR P+++  + +++AE  + +      +                   
Sbjct: 286 -PEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLAIALKGNEEVSAEL 344

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
                 I       + +D NT  AI A+ +   E+            +   +L  F++  
Sbjct: 345 QMKLDGILQQFGEKMDDDFNTPDAITAVFEWVSEANLLLQRDVVNQAELQAVLHTFHSMN 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +L I    E   + +   +E+L+ ER+   K K +  AD IR  L +KG +LED     
Sbjct: 405 TVLRI--YSEPSEELLDGEVEQLIAERVEARKTKNWGRADEIRDLLATKGIVLEDT---- 458

Query: 450 NGQRMTRWKQK 460
              +  RW++K
Sbjct: 459 --AQGMRWRRK 467


>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 472

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 191/485 (39%), Positives = 262/485 (54%), Gaps = 52/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL  K  EF+ ++   ++MYVCGPTVYD AHIG+AR  IVFDV+ R   Y     
Sbjct: 2   IRVFNTLTEKKEEFKPLNDKTVKMYVCGPTVYDHAHIGHARSAIVFDVIRRWFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TD+DDKII+R+++E            +  K  + + +D   L    PT++P+
Sbjct: 60  RVIYVRNYTDVDDKIIKRSKEEGIPWY------EVAKKYIESYEEDMKALNIKEPTYKPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I +I+ +I  G+AYE+  ++ F       YG  S+RK +E   G R+     
Sbjct: 114 VTEHIEEIIEMIKGLIAKGYAYESEGDVYFSVEKFSEYGKLSKRKTEELIAGARIEPGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+S   EPGWESPWG GRPGWHIECSAM+  YLG+  DIHGGGLDLIFPH
Sbjct: 174 KKNPLDFALWKKSKEGEPGWESPWGIGRPGWHIECSAMAMKYLGRTMDIHGGGLDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     W+HNGF+ +   KMSKS GNF TI ++L       + + +
Sbjct: 234 HENEIAQSEAYTG-KSFVRYWLHNGFVMVNKEKMSKSLGNFFTIKDIL-------KEFSS 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            V+RL +L THYR PIDF+ +RL +AE    +      SK II+                
Sbjct: 286 DVLRLFLLSTHYRSPIDFSFERLKDAERSFGRLLNFIESKEIIEKLPTFEKNSEIFDVEN 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFNAS 388
                 SA+ +D NT  A+  + +L +E+    D                   + I  + 
Sbjct: 346 YKLQFESAMDDDFNTARALGVIFELVKEANLIKDKAIKENKISNKEKETILKAIGIVESY 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG ++ K+         I+ L+  R  L K K F  AD IR  L+  G ILED  + 
Sbjct: 406 LKLLGFKLEKKKQEGIEDELIKLLIDVRSELRKRKAFDLADKIRDGLKDLGIILEDLPSG 465

Query: 449 DNGQR 453
              +R
Sbjct: 466 TIYKR 470


>gi|237756267|ref|ZP_04584825.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
 gi|237691568|gb|EEP60618.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
           SS-5]
          Length = 487

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 179/508 (35%), Positives = 251/508 (49%), Gaps = 73/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL  K  +F  I P  +++Y CG TVYD+ H+G+ R +IVFD++ R LRY   
Sbjct: 1   MSLKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN TD+DDKII RA+ E          S+I+ K  +++  D  +        +
Sbjct: 61  N--VIFVRNFTDVDDKIINRAKNECLP------FSVISDKFIKEYFDDAEKFRIEPADVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HIP +I  IQ ++  G+AYEA+ ++ F       YG  S+R IDE   G R+   
Sbjct: 113 PRVTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK +   EP WESPWG+GRPGWH EC AM   +LG+  DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  WIHNG + + G+KMSKS GN+IT+ E+          +
Sbjct: 233 PHHENEIAQAEALTG-KPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
              ++RL +L  HYR P+DF+  ++ E +    +         +++              
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIEENFEGDLYN 344

Query: 350 -------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA-- 389
                     SA+ +D NT  A+ +L  L RE     D            L  +  +A  
Sbjct: 345 AVQKAQSGFYSAMSDDFNTPEALASLFGLVREMNILRDKAIKHGGISKKALESYKEAAKT 404

Query: 390 ------HILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                  I G+    +                     I+ L++ R    K K+F+ AD I
Sbjct: 405 LHDIGRDIFGLFDSLQPCVKQEEIKAKEKEESINEDLIQVLIEAREKARKDKQFAIADLI 464

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R +L  KG ILED          T+WK+
Sbjct: 465 RDKLAEKGIILEDT------PFGTKWKK 486


>gi|227891227|ref|ZP_04009032.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867101|gb|EEJ74522.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 470

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 171/491 (34%), Positives = 259/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +  +F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ +++      +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSALNVKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID+ + G        
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 185 KKN----PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            ++    P DF LWK++   E  W+SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++     +           L+  +   
Sbjct: 346 VEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IE+L+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFSEEK--ELLGDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT--- 460

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 461 ---AQGTRWKR 468


>gi|301299859|ref|ZP_07206093.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852530|gb|EFK80180.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 470

 Score =  558 bits (1438), Expect = e-157,   Method: Composition-based stats.
 Identities = 171/491 (34%), Positives = 260/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +  +F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ +++      +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSALNVKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID+ + G        
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 185 KKN----PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            ++    P DF LWK++   E  W+SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++               ++L+  +   
Sbjct: 346 VEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IE+L+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFSEEK--ELLDDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT--- 460

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 461 ---AQGTRWKR 468


>gi|300864454|ref|ZP_07109324.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300337549|emb|CBN54472.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 483

 Score =  557 bits (1437), Expect = e-157,   Method: Composition-based stats.
 Identities = 178/499 (35%), Positives = 249/499 (49%), Gaps = 65/499 (13%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YN+L R++   + I+P  +RMY CG TVYD  H+G+AR  I +DV+ R L +   E  
Sbjct: 4   KLYNSLTRRVEPLETIEPGKVRMYCCGVTVYDNCHLGHARSYIAWDVVRRYLTWRGYE-- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V YV+N TDIDDKI+ RAR+E        ++  +  + TQ + +D  RL  L     PRA
Sbjct: 62  VRYVQNFTDIDDKILNRARKE------GSSMEEVAERYTQTYFEDMKRLNVLEADEYPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------V 179
           T+ +  +  LI  +   G+AY +  ++ +       YG  S RK DE + G         
Sbjct: 116 THTMDGIKRLIHELESKGYAYASGGDVYYKVRQFSEYGKLSGRKFDEMQAGASGRVESED 175

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   KK+P DF LWK +   EP W+SPWG GRPGWHIECSAM     G   DIHGGG D
Sbjct: 176 AEAQKKKDPFDFALWKGAKSGEPAWDSPWGSGRPGWHIECSAMVRQSFGDRIDIHGGGSD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS      +  A  W+HNG + + G KMSKS GNFITI ELL+      
Sbjct: 236 LIFPHHENEIAQSEAVTG-QPLATYWLHNGMVKVNGEKMSKSLGNFITIRELLD------ 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------TSTSK 344
           +     V+RL +L  HYR+PIDFT   +  A+   +   +                +   
Sbjct: 289 KPTDPMVVRLFVLTAHYRKPIDFTDDAIASAQNGWNTINEGFLFGHEYGSQFGWKLALED 348

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNA 387
                   SA+ +D NT +A+  + +LA+E  ++ ++L                     +
Sbjct: 349 KEAVQQFQSAMDDDFNTPNALAVVFELAKELRRDRNILIHGGKIETPGEVIQQKWHTLVS 408

Query: 388 SAHILGI-------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             H+LG+              +      IE L+Q+RL   K K F+  D IR +L+ +G 
Sbjct: 409 LLHVLGLTNLVPASATLSADQSGLTDKDIEILIQQRLAARKAKNFAEGDRIRNELKDRGI 468

Query: 441 ILEDYKNPDNGQRMTRWKQ 459
            L D K+       T W +
Sbjct: 469 TLIDQKDGT-----TIWHR 482


>gi|170760749|ref|YP_001788843.1| cysteinyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|229558627|sp|B1KTA5|SYC_CLOBM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169407738|gb|ACA56149.1| cysteine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 465

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 175/488 (35%), Positives = 258/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEE------GSTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G+R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGSRINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKNQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDDLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGVRWKQ 464


>gi|126668153|ref|ZP_01739115.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627423|gb|EAZ98058.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 464

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 184/484 (38%), Positives = 266/484 (54%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL +K  +F+ I+P  + +YVCG TVYD+ H+G+AR ++ FDV+ R LR+   + 
Sbjct: 2   IRIYNTLSQKKEQFKPIEPGKVGLYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKI+ RA +        +  + +T +      +D  RL  L+P  +PR
Sbjct: 61  -VNYVRNITDIDDKILRRADEN------GEVYTCLTERMIAAMHEDEARLGVLSPNAEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I+ +I  GHAY A+  ++ F  SS  +YG  S++K+++   G RV  + 
Sbjct: 114 ATAFISDMIAMIETLIAGGHAYAADNGDVYFLVSSFADYGKLSKKKLEDLLAGARVDVEQ 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++PADF LWK + P E  W SPWG GRPGWHIECSAM++H LG  FDIHGGG DL+FP
Sbjct: 174 AKRSPADFALWKAAKPDEVFWPSPWGNGRPGWHIECSAMANHCLGDTFDIHGGGPDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H G + +   KMSKS GNF TI E++ET       +P
Sbjct: 234 HHENEIAQSECATG-HTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMET-------YP 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLS 353
           A V+R  ++ +HYR  +D++   L E+   L+K              + ++   D   + 
Sbjct: 286 AEVVRYFLVSSHYRSQVDYSEDNLIESGRSLTKLYNALRGVTPLASDAVARTAHDTLFVK 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEHL--- 401
            + +D N   A+  LH LA E  +               +      +LG+      L   
Sbjct: 346 RMDDDFNCAGAMATLHALAGEMNQQRRDGDEQAAAASATVLVRLGSVLGLLQQDPELFFQ 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 N+  +  IE ++Q R    K + F+ AD IR +L ++G IL+D +        T
Sbjct: 406 SDSGQGNELSAGQIETMIQSRADARKTRDFAGADQIRDELLARGVILDDSR------EGT 459

Query: 456 RWKQ 459
            W++
Sbjct: 460 SWRR 463


>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
 gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|109894913|sp|Q3J8Y9|SYC_NITOC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 485

 Score =  557 bits (1437), Expect = e-156,   Method: Composition-based stats.
 Identities = 185/505 (36%), Positives = 270/505 (53%), Gaps = 72/505 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+  EF  I+   +RMYVCG TVYD  H+G+AR M+VFD++ R LR    E 
Sbjct: 2   LRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        ++I  +T++  Q   +D   L  L P  +PR
Sbjct: 61  -VIYVRNITDIDDKIIHRANER------GESIHTLTARYIQALHEDEASLQILPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  ++ +++ ++  G+AY+  N +I +D S    YG+ S R +++ + G RV    
Sbjct: 114 ATESMEAILAMVRQLLDQGYAYQGENGDIYYDVSHFEGYGALSGRHLEDLRAGERVQVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG DL FP
Sbjct: 174 AKTDPLDFVLWKAAKSGEPAWESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +   N W+HNGF+ L   KMSKS GNF T+ E+LE        + 
Sbjct: 234 HHENEIAQSEAATGGK-FVNYWMHNGFVRLNDEKMSKSLGNFFTVREVLE-------HYH 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP---- 349
             V+R  +L +HYR P+++T Q+L  A+  +++              ++++G+       
Sbjct: 286 PEVLRYFILSSHYRSPLNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLSWEFTDG 345

Query: 350 ------AVLSALYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFNASAHILGI 394
                     A+ +D NT  A+  L+++         A ++ K   L  +  +   ILG+
Sbjct: 346 GDPFVLRFREAMDDDFNTPEALALLNEVRHALNRAREAGDTEKGQSLAVLLRSLGGILGL 405

Query: 395 EV--CKEHLNKNISIA------------------IEKLVQERLILLKMKKFSSADYIRKQ 434
                ++ L  +  +A                  IE+LV +R +  K K ++ AD IR  
Sbjct: 406 LAHEPEQFLRDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDWAEADRIRGI 465

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ +G  LED          T W++
Sbjct: 466 LKDQGITLEDTAA------GTLWRR 484


>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
 gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 480

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 180/494 (36%), Positives = 257/494 (52%), Gaps = 58/494 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++Y+TL      F+ I    I +YVCG TVYD+ H+G+AR M+ FDV+ R LR   
Sbjct: 8   QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII+RA          + I+ +T +      +D   L C +P  
Sbjct: 68  YQ--VNYVRNITDIDDKIIQRA------YDNGETITELTDRFITAMHQDEQFLGCQSPNI 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           +PRAT HI  M +LI  ++    AY+ +  ++ +     PNYG  S+R +D+ + G   R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG+ FDIHGGG 
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI E+++     
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVD----- 293

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------K 344
              +    IR  +L +HYR P++F+   L E+   LS+  Q+  S              +
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGI- 394
                A   A+ +D NT  A+  L  +  E  +                    A +L I 
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411

Query: 395 -----EVCKEHL----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                E  + ++    +      I   + +R      K F+ AD IR +L  +G  LED 
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELED- 470

Query: 446 KNPDNGQRMTRWKQ 459
                G+  T W++
Sbjct: 471 -----GRMGTTWRR 479


>gi|317495866|ref|ZP_07954229.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914043|gb|EFV35526.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
          Length = 465

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 180/487 (36%), Positives = 261/487 (53%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E        + S +T K    F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEE------GISTSELTDKYIAAFFKDYDALGCKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I  +I  G AYE+N ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIIDFIAKLIEEGFAYESNGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W SP+G GRPGWHIECS M+   LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWASPFGEGRPGWHIECSVMAKETLGDTIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     +N W+HN F+N++  KMSKS GNF  + +++            
Sbjct: 234 HENEIAQSECHNHA-PFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIS-------EIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDPA---- 350
            V+RL ML  HYR PI++T++ +  A+    K   +  +             +D      
Sbjct: 286 MVLRLFMLTVHYRTPINYTLENIELAKTNFEKLKTSYQNLEFRLNNEMTVEKLDDEVVAL 345

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----IL 392
                      + +D NT +A+ + +++ R +         N + L +  A+      IL
Sbjct: 346 ASSELEKFEEYMQDDFNTANALSSWYEVVRITNSYTAQNEVNKETLELLKAAFDTYSSIL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI V  +  N      IEKL++ER    K + F+ AD IR  L+ +G ILED K      
Sbjct: 406 GINVKDD--NSLEDSHIEKLIEERENARKNRDFALADKIRDDLKEQGIILEDTK------ 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKK 464


>gi|148657145|ref|YP_001277350.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148569255|gb|ABQ91400.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 478

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 178/493 (36%), Positives = 249/493 (50%), Gaps = 59/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYNTL R +  F+ ++P  ++MYVCG TVYD AHIG+A   IVFDV+ R L Y   
Sbjct: 1   MSIRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V N TD+DDKII RAR+      I      +      +F++D   L        
Sbjct: 61  --AVQHVVNFTDVDDKIINRARE------IGRDPKELAESYIAEFLEDLEALNVKRAHIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  +P++   I  +I  GHAY  + ++ F  +++P+YG  SRR +D+   G R+   
Sbjct: 113 PRATETMPEIQQFITRLIETGHAYVVDGDVYFRIATVPDYGKLSRRSLDDMIAGNRISVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NPADF LWK + P EP W+SPWG GRPGWHIECSAM+  +LG+  DIHGGG DLIF
Sbjct: 173 ERKENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGADLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG---------RKMSKSNGNFITINELLE 293
           PHHENEIAQ+      +  A  W+HNG L ++           KMSKS GN +TI E L 
Sbjct: 233 PHHENEIAQTESLTG-KPFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLA 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------- 340
                   +   V+RL +L + YR P+ F  +   + E  L +                 
Sbjct: 292 -------QYHPDVLRLTVLSSSYRSPLAFGEEIAADQERKLVRLRSALEPPIGTIEAGLA 344

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
                 +        ++A+ +D NT  A+ AL  L R      D              F 
Sbjct: 345 VDVLLAAARTTRERFIAAMDDDFNTAGALAALFDLVRAINTARDAGVGGAPFAEAQATFR 404

Query: 387 ASAHILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+    ++ + +  +  I+ L++ R  L K K+F+ AD +R +L   G  LED 
Sbjct: 405 ELTDVLGLTLTPQQPIIQQAAPFIDLLIEVRSELRKAKQFALADMVRNRLADLGITLEDT 464

Query: 446 KNPDNGQRMTRWK 458
                  + TRWK
Sbjct: 465 ------PQGTRWK 471


>gi|149183935|ref|ZP_01862320.1| cysteinyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848358|gb|EDL62623.1| cysteinyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 465

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 166/486 (34%), Positives = 258/486 (53%), Gaps = 51/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKI+NTL RK  EF+ ++   ++MYVCGPTVY++ HIGNARP IVFD ++R   Y   
Sbjct: 1   MTIKIFNTLTRKKEEFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVHRYFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I+ A +      + + +  I  +  + + +DT  L C      
Sbjct: 61  D--VNFVSNFTDVDDKLIKAANE------LGEDVPAIAERFIEAYHEDTEALGCQRADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  +  +I  I+ +I  G+AYE+  ++ + T     YG  S + ID+ K+G R+   
Sbjct: 113 PRVTESMDIIIDFIEALIDKGYAYESQGDVYYRTRKFEGYGKLSHQSIDDLKVGARIEAG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK +   E  WESPWG+GRPGWHIECSAM+  YLG+  DIH GG DL F
Sbjct: 173 DKKEDPLDFVLWKAAKEGEIFWESPWGQGRPGWHIECSAMAKKYLGETIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS   +  +  A  W+HNG++N++  KMSKS GNF+ +++++       +  
Sbjct: 233 PHHENEIAQSEALN-EKPFARYWMHNGYINIDNEKMSKSLGNFVLVHDII-------KEQ 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              V+R  ML  HYR PI++ ++ L  A+  L +   +  +                   
Sbjct: 285 DPQVLRFFMLSVHYRHPINYNLELLENAKSGLDRLKTSYENLKHRREVSAELTDNNEEWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNA-SAHILG 393
                +    +  + +D NT + I  L +L+R       E   +  ++  F+        
Sbjct: 345 EKIASLKNQFIEEMDDDFNTANGISVLFELSRQANYYLMEKNTSITVIDAFSQHFKEFFE 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +   K    + +   IE+++ +R+   K + F  AD +R +L++   ILED        +
Sbjct: 405 VLGLKLEEAELLDEEIEEMINQRIQARKDRNFQLADELRDKLKAMNIILEDT------AQ 458

Query: 454 MTRWKQ 459
            TRWK+
Sbjct: 459 GTRWKR 464


>gi|54308291|ref|YP_129311.1| cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|61216519|sp|Q6LT67|SYC1_PHOPR RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|46912719|emb|CAG19509.1| putative cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 464

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 184/485 (37%), Positives = 259/485 (53%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L ++  EF+ I P  I MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTKQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        ++   +T +   +  KD   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GESCESLTERLIGEMHKDFDALGMKRPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I L + +I  G AY A N +++F+ S    YG  SR+ +D+ + G RV    
Sbjct: 114 ATEFIAEIIILCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDIDM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCATG-SQYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSA 354
           A  +R  ++  HYR  ++++   L +A   L +   +     +   A           ++
Sbjct: 286 AESVRYFLMSGHYRSQLNYSEDNLKQARSALERLYTSLRGLDLTAQAEGGEEFVTRFTAS 345

Query: 355 LYNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASAHILGIE------ 395
           + +D NT  A   L  +ARE  +                L       A ILG+       
Sbjct: 346 MNDDFNTPEAYSVLFDMAREINRLKADETIANNIVQASALGARLRELADILGLLSQDPEA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +    ++    IE LVQ+RL     K +++AD  R +L +   ILED      G + T
Sbjct: 406 FLQGGAGQDDVAEIETLVQQRLDARAAKDWAAADAARDKLLAMKIILED------GPQGT 459

Query: 456 RWKQK 460
            W++K
Sbjct: 460 TWRRK 464


>gi|319941120|ref|ZP_08015456.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319805477|gb|EFW02279.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 468

 Score =  557 bits (1436), Expect = e-156,   Method: Composition-based stats.
 Identities = 188/481 (39%), Positives = 260/481 (54%), Gaps = 41/481 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+TL R+   F++++P  +RMYVCG TVYD+ HIG+ R  + FDV+ R L     + 
Sbjct: 2   LSIYSTLTREQRPFESLEPGRVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEASGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITD+DDKII RA +             +T +  +   +D   L CLAPT +PR
Sbjct: 61  -VTFVRNITDVDDKIIRRAAER------GVTTDELTDEFARAMQEDMLALGCLAPTFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ LI  +   G AY  A+ ++ +     PNYG  S + ID+ + G RV E+ 
Sbjct: 114 ATQYIPQMLNLIGKLEEKGFAYHAADGDVDYAVRKFPNYGRLSGKSIDDLQSGARVQERE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+S WG GRPGWHIECSAM+   LG+  DIHGGG DL+FP
Sbjct: 174 GKHDPLDFVLWKSAKPGEPQWDSKWGCGRPGWHIECSAMAMDLLGETIDIHGGGPDLVFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELL-ETKKF 297
           HHENEIAQS  A    + A  W+H+G L +     +  KMSKS GNF TI + L ET   
Sbjct: 234 HHENEIAQSEAATG-HQFARTWMHSGPLRVRSADGKEEKMSKSLGNFWTIRDALKETNAA 292

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------- 350
            G    A V+R  +L + YR PI F+   + EA   L +       +     A       
Sbjct: 293 YGEGCGAEVLRFFLLRSQYRSPITFSSVLIEEAHKALVRLYTALKGRAADRAALDWNEPF 352

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----FNASAHILGIEVCK---- 398
                +A+ +D NT  A+  L +LA E  +      +          +ILG+E  K    
Sbjct: 353 AARFKAAMDDDFNTALAVSVLFELATEINRTGSPALVRQLLGLGRILNILGMEPEKFLQG 412

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                + +  IE L++ER +  K K F+ AD IRK L ++G  L+D      G   T W+
Sbjct: 413 GAEASDDASRIEGLIEERALAKKAKNFARADEIRKSLLAEGIELQD------GAAGTTWR 466

Query: 459 Q 459
           +
Sbjct: 467 R 467


>gi|289432010|ref|YP_003461883.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945730|gb|ADC73427.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 485

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 175/477 (36%), Positives = 241/477 (50%), Gaps = 42/477 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ +F  ++   ++MYVCG T     HIG+A   I FDV+ R L Y     
Sbjct: 1   MKIYNTLSGKLEKFVPLENGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII +A  +          S +  +N   F+     L      + PR
Sbjct: 59  RVKYIQNFTDIDDKIIAKANAQ------GIEPSTLAERNIGVFLDAMAALNITPADYYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +P++I ++  +I  G+AY     +      +  YG  S R +++   G RV     
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYAVGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------PAVL 352
             +R+ +L + YR P+ ++ + L  AE    +  QT+  K                    
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETAVDTKAYRERFT 345

Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIE--VCKEHLNK 403
             + ND NT +A+  +  L+RE         K+ D   +F   A ILG+   V +     
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKTGT 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +++  IE L++ R  L   K++  AD IR  L++ G +LED          T WK K
Sbjct: 406 DVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLEDS------AGGTVWKVK 456


>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
 gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
          Length = 494

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 185/509 (36%), Positives = 263/509 (51%), Gaps = 73/509 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I I+NT   +   F  +  +++RMYVCG TVYD+ HIG+AR ++VFD+LYR LR+   
Sbjct: 1   MPILIHNTKTNRKEPFTPLTDNHVRMYVCGITVYDYCHIGHARSVLVFDMLYRYLRHRRY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN TDIDDKII+RA ++        +   ++ +  Q F +D   L    PT +
Sbjct: 61  D--VTFVRNFTDIDDKIIKRAAEQQT------SCQELSQRFIQAFHEDMAALGTEPPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT H+P+MI LI+ +I  G AY A  ++ F   +   YG  S R +DE + G R+   
Sbjct: 113 PKATEHLPEMIALIEELIAKGLAYPAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK S P EP WESPWG GRPGWHIECSAM   YLG+ FDIHGGG DL+F
Sbjct: 173 ELKEDPLDFVLWKGSKPEEPAWESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  AN WIH+GF+ ++  KM+KS GNF+TI ++L       + +
Sbjct: 233 PHHENEIAQSEGATG-KPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDVL-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
           PA V+RL +  THYR P+D++   + +AE  LS+      + G                 
Sbjct: 285 PAEVLRLLLFSTHYRNPVDYSEAAMADAETALSRLYAALAAVGKLPAGGAPEATSVITAK 344

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--------------- 384
                  ++     A+  D N+  A+       +   K    LP                
Sbjct: 345 DRQKLDNLESDFHQAMDIDFNSAKALGRFFDTVKIINKVRQALPATPATRDLELLRDSAA 404

Query: 385 -FNASAHILGIEVC---------KEHLNKNISI---AIEKLVQERLILLKMKKFSSADYI 431
                  I G+            +E L   + I    IEKL+ +R    +   ++ AD I
Sbjct: 405 KLRELGGIFGLLQEDPAAYLARRQERLLAGLDITPGEIEKLLAQRQTARQNGDWAEADRI 464

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           R  L +K   ++D      G   T W+ +
Sbjct: 465 RDLLAAKKIAIKD------GPDGTSWEVQ 487


>gi|301051827|ref|YP_003790038.1| cysteinyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300373996|gb|ADK02900.1| cysteinyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 465

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 171/489 (34%), Positives = 249/489 (50%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              +IR  ML  HYR PI+F+ + L      L +                          
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L       +    Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELAQEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 487

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 177/508 (34%), Positives = 251/508 (49%), Gaps = 73/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL  K  +F  I P  +++Y CG TVYD+ H+G+ R +IVFD++ R LRY   
Sbjct: 1   MSLKIYNTLTGKKEDFAPIKPPQVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN TD+DDKII RA+ E          ++I+ K  +++  D  +        +
Sbjct: 61  N--VIFVRNFTDVDDKIINRAKNECVP------FTVISDKYIKEYFDDAEKFRIEPADIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HIP +I  IQ +I  G+AYE + ++ F      +YG  S+R IDE   G R+   
Sbjct: 113 PRVTTHIPDIIKFIQELIDKGYAYEVDGDVYFSVRKFKDYGKLSKRSIDELLAGARIEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK +   EP WESPWG+GRPGWH EC AM   +LG+  DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  WIHNG + + G+KMSKS GN++T+ E+          +
Sbjct: 233 PHHENEIAQAESLTG-KPFARYWIHNGLVTVNGQKMSKSLGNYVTLKEIYS-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
              ++RL +L  HYR P+DF+  ++ E +    +         I+               
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIQEYEILQKLPTDENFEEDLYT 344

Query: 350 -------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA-- 389
                     SA+ +D NT  A+ +L  L R+     D            L  +  +A  
Sbjct: 345 EIQKAQSGFYSAMSDDFNTPEALASLFGLVRQMNILKDKAIKQGGISKKALQSYKEAADT 404

Query: 390 ------HILGIEV------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                  I G+               ++   K     I  L++ R    K K+FS AD I
Sbjct: 405 LHNICRDIFGLFDSLQPCVKTEEIKVEKQEEKLDEDLINILIEVRDKARKEKQFSIADTI 464

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R +L  KG ++ED          T+WK+
Sbjct: 465 RDKLAEKGIVIEDT------PFGTKWKK 486


>gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 480

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 180/494 (36%), Positives = 257/494 (52%), Gaps = 58/494 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++Y+TL      F+ I    I +YVCG TVYD+ H+G+AR M+ FDV+ R LR   
Sbjct: 8   QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII+RA          + I+ +T +      +D   L C +P  
Sbjct: 68  YQ--VNYVRNITDIDDKIIQRA------YDNGETITELTDRFITAMHQDEQFLGCQSPNI 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           +PRAT HI  M +LI  ++    AY+ +  ++ +     PNYG  S+R +D+ + G   R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG+ FDIHGGG 
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI E+++     
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVMD----- 293

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------K 344
              +    IR  +L +HYR P++F+   L E+   LS+  Q+  S              +
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGI- 394
                A   A+ +D NT  A+  L  +  E  +                    A +L I 
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411

Query: 395 -----EVCKEHL----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                E  + ++    +      I   + +R      K F+ AD IR +L  +G  LED 
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELED- 470

Query: 446 KNPDNGQRMTRWKQ 459
                G+  T W++
Sbjct: 471 -----GRMGTTWRR 479


>gi|322374189|ref|ZP_08048722.1| cysteine--tRNA ligase [Streptococcus sp. C150]
 gi|321276894|gb|EFX53966.1| cysteine--tRNA ligase [Streptococcus sp. C150]
          Length = 447

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 167/468 (35%), Positives = 252/468 (53%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMARSLRDFVPLTENVVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +         +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------AGISTKELSDKFIAAFMEDTAQLGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             N++ ++I  +  ++  G AY +  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TARKENPLDFALWKAAKEGEISWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AE+ L     T +    G +D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTGQVDQAELQTYLDAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + +  L  +A+     H    +   F     + GI   +E L+++    
Sbjct: 346 QEAMDDDFNTANGVTVLFDMAKWINSGHYDQTVKDAFEKVLQVFGIVFKEEVLDED---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IEKL++ER      K F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|308185969|ref|YP_003930100.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056479|gb|ADO08651.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 500

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 184/485 (37%), Positives = 257/485 (52%), Gaps = 48/485 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIYNTL R+  EF+ I    I MYVCG TVYD  HIG+ R  + FDV+ R LRY  
Sbjct: 38  RSMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLG 97

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  + YVRNITDIDDKII+RA +        ++I  +T++   +   D   L  L P  
Sbjct: 98  YQ--LNYVRNITDIDDKIIKRANEN------GESIETLTNRMIGEMHNDFAALGILPPDE 149

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT HI ++I L+Q +I   HAY A+  +++FD  S  +YG+ SR+ +++ + G RV 
Sbjct: 150 EPRATRHIAEIIELVQTLIARNHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVE 209

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL
Sbjct: 210 VADVKRNPMDFVLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDL 269

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA       N W+H+G + ++  KMSKS GNF T+ ++L       +
Sbjct: 270 MFPHHENEIAQSSCAHDG-PYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------Q 321

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAV 351
            + A  +R  ++  HYR  +++    L +A   L +             +      +   
Sbjct: 322 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSVKAHGGEAFEARF 381

Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL-- 401
            SA+ +D NT  A   L  +ARE  +         H L       A++LGI      L  
Sbjct: 382 RSAMDDDFNTPEAYSVLFDMAREVNRLKSEDGASAHGLASKLREMANVLGILQQDPELFL 441

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 N      IE  V+ R      K ++ AD  R +L + G I+ED      G + +
Sbjct: 442 QSGAQVNDEEVAEIEHWVKARADARAAKAWAEADIARDKLNALGVIVED------GPQGS 495

Query: 456 RWKQK 460
            W++K
Sbjct: 496 SWRRK 500


>gi|312796649|ref|YP_004029571.1| cysteinyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312168424|emb|CBW75427.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Burkholderia rhizoxinica
           HKI 454]
          Length = 483

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 176/484 (36%), Positives = 253/484 (52%), Gaps = 49/484 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNTL R    F  +    +RMYVCG TVYD+ H+G+ R M+VFD++ R LR     
Sbjct: 20  QLRLYNTLSRNKETFVPLHDGEVRMYVCGMTVYDYCHVGHGRLMVVFDMIQRWLRTLGY- 78

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P H+P
Sbjct: 79  -RVTYVRNITDIDDKIIRRA------VDNGEPIRALTERFIAAMHEDEAALNIQRPDHEP 131

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT  I QM+ +I  +  +G+AY   + ++ +       YG  S + +++ + G RV + 
Sbjct: 132 RATQFISQMLGMIDALERNGYAYSGRDGDVNYSVRKFAAYGQLSGKSLEDLRAGERVTQN 191

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF+LWKRS   EP   GW+S WGRGRPGWHIECSAMS   LG+ FDIHGGG D
Sbjct: 192 DAKEDPLDFVLWKRSKDGEPPDTGWDSKWGRGRPGWHIECSAMSCALLGERFDIHGGGQD 251

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS      +   N W+HNGF+N++  KMSKS GNF T+ ++L       
Sbjct: 252 LQFPHHENEIAQSEGVTG-QPFVNYWLHNGFVNVDNEKMSKSLGNFFTLRDVL------- 303

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------P 349
           + +   VIR+ +L  HYR P++++   L +A   L++      +    D           
Sbjct: 304 QRYDGEVIRMLILRAHYRSPLNYSDSHLDDARAALTRLYTALKNVAPDDRALDWSERHAA 363

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------------ 395
           A  +A+ +D NT  A  AL  L  +  +  D  L       A +LG+             
Sbjct: 364 AFRAAMNDDFNTPVAFAALFDLVTDLNRTGDPALARQLKGLAGVLGMLGRDPREYLQARA 423

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              + L    +  I++ ++ R    + K ++ AD IR  L   G +LED          T
Sbjct: 424 PATDELAPLDAAQIDEQIEARAQAKRAKNYAEADRIRAALLEAGVVLEDKPGGK-----T 478

Query: 456 RWKQ 459
            W++
Sbjct: 479 EWRR 482


>gi|150402240|ref|YP_001329534.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|166200151|sp|A6VG07|SYC_METM7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150033270|gb|ABR65383.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 476

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 169/480 (35%), Positives = 245/480 (51%), Gaps = 54/480 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ ++ + ++MYVCGPTVYD  H+G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKPLNENEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+R++++  +         ++      F+ D   L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRSQEKGKN------PKELSETFVNVFLNDMATLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I  I+ +I  G AY+  N + F+     NYG  S   +++   G R+     
Sbjct: 114 VTEHIPEIIAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLISGARIEPSDE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK + P EP WESP+G GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNPEDFALWKTAKPGEPKWESPFGEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNFITI ++        + +  
Sbjct: 234 HENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFITIEDI-------SKEYDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDP----- 349
            ++R   +  HYR PID+T + ++  +  L K            + S   GI +      
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESMSHVKNNLEKIYNVIENIRISLEKSEKSGIWNENEFLL 345

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------------FNAS 388
                        A+ +D NTV A++++ +++    K   L+              F   
Sbjct: 346 YDILKNSKHNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVKTPSEGLLLKAFDFFKIV 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     KE    N    ++ L++ R  L   K +  +D IR  L+  G+ +ED  
Sbjct: 406 GEIFGLFENYFKESSESNDEGFVKFLIELRSDLRLQKNYEMSDKIRDGLKELGYQIEDNP 465


>gi|270307505|ref|YP_003329563.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153397|gb|ACZ61235.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 457

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 177/477 (37%), Positives = 242/477 (50%), Gaps = 42/477 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF  ++   ++MYVCG T     HIG+A   I FDV+ R L Y     
Sbjct: 1   MKIYNTLSGKLEEFVPLEDGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLSYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII +A  +          S +  +N   F+     L      + PR
Sbjct: 59  RVKYIQNFTDIDDKIIAKANAQ------GIEPSTLAERNIGVFLDAMAALNITPADYYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +P++I ++  +I  G+AYEA   +      +  YG  S R +++   G RV     
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYEAGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQVDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------PAVL 352
             +R+ +L + YR P+ ++ + L  AE    +  QT+  +                    
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARQDNPQSNETNVDVKTYRERFT 345

Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILG--IEVCKEHLNK 403
             + ND NT +A+  +  L+RE         K+ D   +F   A ILG  +++ +     
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEAEGGKSTDGQKLFKELADILGLSLKIAEPETGT 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    IE L++ R  L   K++  AD IR  L+S G +LED          T WK K
Sbjct: 406 DAVPFIELLIELRKDLRLAKQYQLADKIRTSLDSAGILLEDS------AGGTVWKAK 456


>gi|259502662|ref|ZP_05745564.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169307|gb|EEW53802.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 471

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 170/492 (34%), Positives = 255/492 (51%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LTIYNTLTRRKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K  + F++DTT +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAHEQ------GITVPQLADKFIRAFMEDTTAVNIEPATKHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +IP++I  +Q +I +G+AYE++ ++ +      NYG  S + ID+ ++G        
Sbjct: 114 ATENIPEIIAFVQRLIKNGYAYESDGDVYYRARKFANYGQLSGQSIDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLG+  DIH GG DL
Sbjct: 174 EIGKKEDPMDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGQTLDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +     W+HNGF+ +  +  KMSKS  NFIT++++++T    
Sbjct: 234 EFPHHENEIAQSEAATG-QPFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDIIKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
                  V+R  M  T YR PI ++   LT+A+  L                        
Sbjct: 290 ----DPQVLRFFMATTQYRRPIQYSEDNLTDAQNNLEHIRTAYDNLTYREQDAEVGVDEV 345

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNAS 388
            S           + + +D+N  + I  +++L + +                        
Sbjct: 346 VSQQLADFTARFTAVMDDDINVQNGIAVVYELVKAANTYAQQPVVKQGALQAYKDKLAQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI++     N+     I+ L++ER    K K F+ +D IR +L+ +G ILED    
Sbjct: 406 VSIFGIKLV-ARDNQIDDEQIKALIEERNQARKNKDFARSDQIRDELKQRGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TR+K++
Sbjct: 462 ---PQGTRYKKE 470


>gi|241888786|ref|ZP_04776092.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241864462|gb|EER68838.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 465

 Score =  557 bits (1435), Expect = e-156,   Method: Composition-based stats.
 Identities = 182/487 (37%), Positives = 263/487 (54%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E        + S +T K    F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEE------GISTSELTEKYITAFFKDYDALGCKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I  ++  G AYEA  ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIINFIAKLVEEGFAYEAKGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W+SP+G GRPGWHIECS M+   LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGDTIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C + +   +N W+HN F+N++  KMSKS GNF  + +++            
Sbjct: 234 HENEIAQSECHNHV-PFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIA-------EIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID------ 348
            V+RL ML  HYR PI++T++ +  A+    K   +            S   +D      
Sbjct: 286 MVLRLFMLTVHYRTPINYTLENIELAKTNFEKIKTSYQNLQFRLNNDMSDEKLDTDVVAL 345

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----IL 392
                      + +D NT +A+ + +++ R S         N + L + NA+      IL
Sbjct: 346 VTEELNKFEEYMQDDFNTANALSSWYEIVRISNSYTAKEAVNKETLELINAAFETYSSIL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI V ++  N   S  IE L+ ER    K + F+ AD IR  L+ +G ILED K      
Sbjct: 406 GISVKED--NTLDSEHIESLISEREEARKNRDFALADKIRDDLKEQGIILEDTK------ 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKK 464


>gi|218895225|ref|YP_002443636.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226735046|sp|B7ISZ9|SYC_BACC2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218541053|gb|ACK93447.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 465

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 171/489 (34%), Positives = 250/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              +IR  ML  HYR PI+F+ + L      L +      +                   
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                   A   A+ +D NT +AI  L+ +A  + +               +        
Sbjct: 345 VEIEKFQTAFEEAMNDDFNTANAITELYNVANYANQYLLEEHTSKVVIEAYVKQLETLFD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+E+ +E L       +    Q+R+   K + F+ +D IR  L+ +  ILED      
Sbjct: 405 ILGLELTQEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKGRNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|312869734|ref|ZP_07729881.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094783|gb|EFQ53080.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 471

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 172/492 (34%), Positives = 255/492 (51%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LKIYNTLTRQKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K  Q F+ DTT +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAHEQ------GITVPQLADKFIQAFMADTTAVNIEPATKHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +IP +I  +Q +I  G+AYE++ ++ +      +YG  S + ID+ ++G        
Sbjct: 114 ATENIPDIIAFVQTLIEKGYAYESDGDVYYRARKFAHYGQLSGQSIDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLG+  DIH GG DL
Sbjct: 174 EIGKKEDPMDFALWKAAKPGEISWDSPWGQGRPGWHIECSVMSTKYLGQTLDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +     W+HNGF+ +  +  KMSKS  NFIT++++++T    
Sbjct: 234 EFPHHENEIAQSEAATG-QPFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDIIKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
                  V+R  M  T YR PI ++   LT+A+  L        +               
Sbjct: 290 ----DPQVLRFFMATTQYRRPIQYSEDNLTDAKNNLEHIQTAYDNLTYRQQDAATGDDAL 345

Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNAS 388
                        +A+ +D+N  + I  +++L + +        +               
Sbjct: 346 VTQQLADFTARFTTAMDDDINVQNGIAVVYELVKAANTYAQQAAVKQGALQAYKDKLAQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI++   H N      I+ L++ER    K K F+ +D IR +L+ +G ILED    
Sbjct: 406 ISIFGIKLV-AHDNHIDDEQIKALIEERNQARKNKDFARSDQIRDELKQQGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TR+K++
Sbjct: 462 ---PQGTRYKKE 470


>gi|229917379|ref|YP_002886025.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|259511833|sp|C4KZR7|SYC_EXISA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229468808|gb|ACQ70580.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 465

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 173/487 (35%), Positives = 259/487 (53%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YN+L  K   F  I P  + MYVCGPTVY++ H+GNARP I FD + R L Y   E 
Sbjct: 2   IQLYNSLTNKKEPFVPIVPGKVSMYVCGPTVYNYIHVGNARPAIAFDTVRRYLTYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A +      + +    +T++  + ++ DT  L        PR
Sbjct: 61  -VKYVLNFTDVDDKIIRTANE------LGEDTETLTNRYIEAYLADTGALNVQPADVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ + ++I  I+ +   G AYE+  ++ F T     YG  S++ I++ + G+RV     
Sbjct: 114 VTDTMEEIIEFIRQLETEGFAYESEGDVYFRTKKFETYGKLSQQSIEDLRAGSRVDVGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM+  +LG   DIH GG DL FPH
Sbjct: 174 KEDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMAKKHLGTTIDIHAGGHDLKFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  +  AN W+HNGF+N+E  KMSKS GNF+ ++E L       +    
Sbjct: 234 HENEIAQSEACNHAK-FANYWLHNGFINIENEKMSKSLGNFLLVHEAL-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------STS 343
            V+R  ML  HYR PI+++ + + +A    S+  +                         
Sbjct: 286 MVLRFFMLSVHYRHPINYSRELIEQAANGWSRIKEAYQNIEYRLSVTAGLGEASESMERK 345

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHIL 392
              I  + + ++ +D+NT +A+  L  LARE+                +L +F+    +L
Sbjct: 346 LESIKASFIESMDDDINTANAVTVLFDLAREANIYAKADHVAKATLEQVLSLFDELTGVL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + +E   + +   I++L+QER      + F+ AD IR  L+ +   LED        
Sbjct: 406 GLTLAEEK--ELLDAEIDQLIQERNDARAARNFARADEIRDLLKEQNIQLEDT------A 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKR 464


>gi|163793631|ref|ZP_02187606.1| cysteinyl-tRNA synthetase [alpha proteobacterium BAL199]
 gi|159181433|gb|EDP65948.1| cysteinyl-tRNA synthetase [alpha proteobacterium BAL199]
          Length = 463

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 216/479 (45%), Positives = 284/479 (59%), Gaps = 42/479 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++KI NTL R    F+ IDPS++RMYVCGPTVYDFAH+GNARP++VFDVL RLLR  Y
Sbjct: 4   QPELKITNTLTRAKEAFRPIDPSHVRMYVCGPTVYDFAHVGNARPVVVFDVLVRLLRRLY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYVRNITD++DKI  RA++        + I  +T++   Q+  D   L    P  
Sbjct: 64  --PRVTYVRNITDVEDKINARAKEN------GEPIEALTARTAAQYQADMDALGAERPDV 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPRAT+HI QMI LI+ +I  GHAY A+  ++F   S+P+YG  SRR  D+   G RV  
Sbjct: 116 QPRATHHIAQMITLIERLIAKGHAYAADGHVLFAVPSMPDYGGLSRRDRDDMIAGARVEV 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++PADF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  +LG+ FDIHGGGLDLI
Sbjct: 176 APYKQDPADFVLWKPSSDDIPGWDSPWGRGRPGWHIECSAMSWEHLGETFDIHGGGLDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA      AN W+HNGF+ +EG KMSKS GNF T++++L       + 
Sbjct: 236 FPHHENEIAQSRCAFGTHTMANYWMHNGFVTVEGEKMSKSLGNFYTVHDVL-------KE 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLS 353
           WP   IRL +L +HYR P+DFT   L EA+  L +  Q   +   +           +++
Sbjct: 289 WPGEAIRLLLLSSHYRAPLDFTSAGLKEAKAQLDRLYQALRNAADVAVEPEAPAGDELMA 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------------VCKEH 400
           AL +DLN   A+  LH+      K  D      A + +LG                    
Sbjct: 349 ALLDDLNVPLAVARLHEAVGRLNKATDPAERSAAKSALLGGGALLGLLQADPEAWFQGGG 408

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +      IE+L+Q R+   K + F+ AD IR  L++ G  LED      G + T WK+
Sbjct: 409 DDDLDPAEIERLIQARVDARKGRDFAEADRIRDALKANGVELED------GPQGTTWKR 461


>gi|330817521|ref|YP_004361226.1| Cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327369914|gb|AEA61270.1| Cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 464

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 188/483 (38%), Positives = 257/483 (53%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ HIG+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMMVVFDIVQRWLRQLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +TS+      +D   L    P H+
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIGELTSRFIAAMHEDLDALGVERPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT++IPQM+ +I  +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATHYIPQMLGMIAALEANGYAYQAKDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P EP    W+S +GRGRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKRAKPEEPADTSWDSKYGRGRPGWHIECSAMGCTLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNTWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDP----- 349
              + A V+R  +  THYR P++++   L +A   L++              +DP     
Sbjct: 288 --KYDAEVVRFFIARTHYRSPLNYSEVHLDDARAALTRLYTALKDVTPDGAPLDPDEPHA 345

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNAS----------AHILGIEV 396
               +A+ +D NT  A+  L +LA E  +  D  L   F             A     + 
Sbjct: 346 QRFAAAMNDDFNTALAVSVLFELAGEVNRTRDAALARQFKQLGALLGLLGRDARAFLQQA 405

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                +     AIE  + ER+   + K ++ AD IR  L   G  LED         +T 
Sbjct: 406 TGAGADALDGEAIEACIAERVAAKQAKNYAEADRIRAALLEAGVALEDKPGG-----LTE 460

Query: 457 WKQ 459
           W++
Sbjct: 461 WRR 463


>gi|303244169|ref|ZP_07330507.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485554|gb|EFL48480.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 476

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 186/496 (37%), Positives = 258/496 (52%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL +K  EF +ID   ++MYVCGPTVYD+AH+G+ R  +VFD + R L +     
Sbjct: 1   MKIYNTLTKKKEEFNSIDEHEVKMYVCGPTVYDYAHLGHGRTYVVFDTIRRYLEHKNY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA +E      N   + +  K  + F++D  +L        PR
Sbjct: 59  IVKLVINFTDIDDKIIKRANEE------NIPPTELADKFIKSFLEDMEKLNIKPAYVYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + HI  +I  I+ +I  G+AY A++ I FD     +YG  S   +DE + G R+     
Sbjct: 113 VSEHIKDIIRFIEVLIKKGYAYVADDGIYFDVRKFKDYGKLSNINLDEIRTGYRIETNLT 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P EP W+SPWG GRP WHIECSAM   YLG+ FDIHGGG DLIFPH
Sbjct: 173 KRNPEDFALWKFAKPNEPKWDSPWGEGRPAWHIECSAMGIKYLGEQFDIHGGGNDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     WIH GF+ ++  KMSKS GNF+ + +LL+        +  
Sbjct: 233 HENEIAQSEVYTDKKPWVKYWIHTGFVMMDKEKMSKSLGNFVELKDLLD-------KYDF 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
            VIRL +L  HYR P+D++ + L +A+I L K   T  +   I                 
Sbjct: 286 EVIRLFLLQRHYRSPLDYSEEGLLDAKISLEKLYNTLKNIDAICRNSHVKHKLNEIDIKT 345

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLL----PIFNAS 388
                       +A+ +D NT  A++ + +++    K        N  LL      F   
Sbjct: 346 YETIKNAWINFYNAMDDDFNTPEALKYVFEVSSVINKYMNESNNPNKSLLIMTNEFFKMI 405

Query: 389 AHILGIE----VCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             I GI       K + +KN+    I+ L+  R  L + K +  AD IR +L++ G  LE
Sbjct: 406 GEIFGIFHNIINNKNNEDKNMEGHLIDILINIRAKLKEEKNYKLADEIRSELKNIGIQLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        + T WK+
Sbjct: 466 DS------PKGTIWKK 475


>gi|169830058|ref|YP_001700216.1| cysteinyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|226735062|sp|B1HNM3|SYC_LYSSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|168994546|gb|ACA42086.1| Cysteinyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 466

 Score =  556 bits (1434), Expect = e-156,   Method: Composition-based stats.
 Identities = 171/489 (34%), Positives = 248/489 (50%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R  +Y   
Sbjct: 1   MSIQIFNSLSRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDKII+ A +      + + +  +T +    + +D T L C      
Sbjct: 61  D--VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+  +I  IQ +I  G+AYE+  ++ + T     YG  S + +D+ K+G R+   
Sbjct: 113 PRVTEHMADIIQFIQVLIEKGYAYESAGDVYYRTRKFNGYGKLSHQSVDDLKIGARIEAG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +  DF LWK + P E  WESPWG GRPGWHIECS M+  +LG   DIH GG DL F
Sbjct: 173 EKKDDALDFALWKAAKPGEIFWESPWGNGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNG++N++  KMSKS GNFI +N++        +  
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIR-------KQI 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
              V+R  ML  HYR PI+F    +  A   L +      +                   
Sbjct: 285 DPQVLRFFMLSVHYRHPINFAKDLVEAASAGLERIRTAYNNVKHRLTTTVSLGDHSDEWL 344

Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                       A+ +D NT + I  L +LAR +                 +  F     
Sbjct: 345 NKITEQKAQFEEAMDDDFNTANGISVLFELARIANIYLNETNTCKKVLETFIETFEVLGD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGIE  KE    +  I      QER+   K + F+ +D IR  L+++G ILED +    
Sbjct: 405 VLGIEFAKEEELLDEEIEALL--QERVEARKNRDFARSDEIRDHLQAQGIILEDTR---- 458

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 459 --QGTRWKR 465


>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 487

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 182/508 (35%), Positives = 257/508 (50%), Gaps = 72/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYNTL R+    Q ++  ++++YVCG T YD+ HIG+AR  +VFD++ R LR+   
Sbjct: 1   MSIRIYNTLSRRKEILQPLEEGHVKLYVCGITSYDYCHIGHARSALVFDMVVRYLRHRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN TDIDDKII RA ++          + +  +   +F  D   L  L P  +
Sbjct: 61  K--VTFVRNFTDIDDKIINRANEQ------GIDSASLALRFINEFYTDMDALGTLRPDLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HIP+MI LI+++I  G AY A+ ++ F       YG  S R + + + G RV   
Sbjct: 113 PKATEHIPEMIGLIEDLIDKGMAYPADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK + P EP W SPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL+F
Sbjct: 173 DKKEHPMDFVLWKAAKPGEPKWPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSC A   +  AN+W+H+GF+ ++  KMSKS GNF+TI ++L       + +
Sbjct: 233 PHHENEIAQSCGASG-KPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDVL-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              V+RL +  T YR P+DFT   L +A   L +  +       +               
Sbjct: 285 EPEVLRLFIFSTQYRNPLDFTETALHDARAGLERMYECLAQVEDLPAEGTEGASVITDKD 344

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTK----------NHDL------LPI 384
                        A+ ND NT  A+  L    +   K            DL         
Sbjct: 345 RTALASLVDRFHQAMDNDFNTAQALAHLFDTVKLLNKVLRTLPERPAAADLNLLRTTAAE 404

Query: 385 FNASAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIR 432
           F   A +LG+      EV   +  K +         I  L+ +R      K +S++D +R
Sbjct: 405 FRELAGVLGLVQRNPAEVVAGNRAKILAGIDLDEETINGLITKRNQARAAKDWSTSDEVR 464

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
             L     +L+D          T W+ K
Sbjct: 465 DYLLEHRIVLKDS------PEGTTWEVK 486


>gi|182678882|ref|YP_001833028.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|229558617|sp|B2IEE1|SYC_BEII9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|182634765|gb|ACB95539.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 458

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 207/478 (43%), Positives = 294/478 (61%), Gaps = 45/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F+ IDP+N+R+Y CGPTVYDF HIGN R +IVFD+L+R+LR  YG  
Sbjct: 3   LQLYNTLTRQKDIFEPIDPANVRLYACGPTVYDFLHIGNGRMLIVFDLLFRVLRDLYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI  RA +          I ++T + T  F +D   L CL PT +PR
Sbjct: 63  HVRYVRNITDVDDKINARAAER------GIDIRVLTDEMTAIFHEDAKALNCLPPTVEPR 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ +MI +I+ ++ +GHAY A   ++FD  S+P+YG  S+R +D+   G RV    +
Sbjct: 117 ATEHMAEMIAIIEKLVANGHAYIAEGHVLFDVPSMPDYGKLSKRPLDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EPGWESPWGRGRPGWH+ECSAMS  +LG+VFDIHGGG+DL+FPH
Sbjct: 177 KRSPTDFVLWKPAKPEEPGWESPWGRGRPGWHLECSAMSWKHLGEVFDIHGGGIDLVFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQ+C A   +  AN+W+HNG L +EG+KMSKS GNF+TI ++L       + WP 
Sbjct: 237 HENEVAQTCSAFGHDVMANVWMHNGHLQVEGQKMSKSLGNFLTIRDVL-------KDWPG 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSALY 356
             +R  ML THYR+PID+T+  L E++  L +W   + +   I+P        +   AL 
Sbjct: 290 ETVRFTMLKTHYRQPIDWTLSSLRESQRELDRWYPVARAFDQINPDNIPGIPSSFRDALQ 349

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEVCKEHLNKNI 405
           +DLNT  AI  L +L +++ +  D   +           F+ S     +E  K     + 
Sbjct: 350 DDLNTPEAITILRRLYKDALETTDYAGVHLLLCGKLLGLFDQS-----LEKWKNWKPASF 404

Query: 406 SIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++     E L++ER      K +  +D++R  L S G +L+D K+       T W+ K
Sbjct: 405 TVENVTFEDLIKEREEARAAKNWPKSDHLRDVLASYGIVLKDNKDGT-----TSWEAK 457


>gi|307154328|ref|YP_003889712.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306984556|gb|ADN16437.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 480

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 170/501 (33%), Positives = 250/501 (49%), Gaps = 65/501 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R+   FQ I+P  +RMY CG TVYD+ H+G+AR  +V+DV+ R L++   
Sbjct: 1   MTLTIYNTLTRRKEPFQPIEPGKVRMYCCGITVYDYCHLGHARTCVVWDVVRRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y++N TDIDDKI+ RA++E        ++  ++ +  + + +D  RL        
Sbjct: 61  Q--VKYIQNFTDIDDKILNRAKKE------GTSMEEVSERFIKAYFEDMDRLHIEKADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  L+  +   G+AY A+ ++ +      +YG  S RK+++ + G      
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYAADGDVYYSVRRFADYGKLSGRKLEDLQAGASGRVE 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE   KK+P DF LWK +   EP WESPWG GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 LEDPETQKKKDPFDFALWKAAKAGEPSWESPWGEGRPGWHIECSAMVRERLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A  W+HNG + + G KMSKS GNF TI +LL+   
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-QPLARYWMHNGMVKVGGDKMSKSLGNFTTIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
                    V+RL +L THYR P+DFT + +  A        +                 
Sbjct: 289 ----KVEPMVVRLFILQTHYRNPVDFTEKAIDAASNGWQTLQEGLLFGHHYGEKLAWDDL 344

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
              +   +       + +D N    +  L +LA+E  K  ++L                 
Sbjct: 345 PGATVPELVQKYREIVDDDFNFAGGLAVLFELAKELRKEGNILVHQGKTDTSPEKLKAQW 404

Query: 383 PIFNASAHILGIEVC----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                 + +LG+E      ++         IE L+++R    K K F+  D IR +L++ 
Sbjct: 405 QTLVELSQVLGLEAIAAQPEQETTGLSDADIEALIEQRAQARKAKNFAEGDRIRDELKAN 464

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G  L D      G  +T+W +
Sbjct: 465 GITLID-----AGGGVTKWHR 480


>gi|150015023|ref|YP_001307277.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|187629800|sp|A6LPP1|SYC_CLOB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149901488|gb|ABR32321.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 466

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 169/486 (34%), Positives = 249/486 (51%), Gaps = 53/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL R+  EF  I    ++MYVCGPTVY+F HIGN R  IVFD + R L Y   + 
Sbjct: 1   MRVFNTLTRQKEEFIPIITGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDK+I +A  E         +  +  K  +++ +D   L     T  PR
Sbjct: 60  -VRFVQNFTDIDDKMINKANDE------GITVKELGDKYIKEYYQDADSLKIERATVNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I  ++ +I  G AYE + ++ + T    NYG    + +D+ ++G R+     
Sbjct: 113 ATEYIHDIIKFVEELIEAGFAYEVDGDVYYSTKKFDNYGRLVGQNLDDLQVGARISVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+   LG   DIH GG+DL FPH
Sbjct: 173 KKDPMDFAVWKAQKPGEPAWESPWGPGRPGWHIECSCMAKKLLGDTIDIHAGGMDLRFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  AN W+H  F+N++ +KMSKS  NF T  E+LE        + +
Sbjct: 233 HENEIAQSEALTG-KTFANYWLHAAFVNVDNKKMSKSLNNFFTAREVLE-------EYSS 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------- 350
             IR  ML  HYR  I+FT + L  A+  + +      +   +                 
Sbjct: 285 DAIRFLMLSGHYRIQINFTKELLDSAKSSIERLYNCINNLENLKDEVTKKLMDEAEEKYL 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASAHILG-- 393
                     +  + +D NT  AI  L  L ++         + +L     +    LG  
Sbjct: 345 KSLDKYREKFIEKMDDDFNTADAISVLFDLTKDINNNVNINSSSELCEKAESMVRELGNP 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + + ++ + K++   I++L+++R    K K F+ AD IR  L+S+  ILED        +
Sbjct: 405 LGILQDRIEKDLETEIQELIEKRQQARKNKDFALADKIRDDLKSRNIILEDT------PQ 458

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 459 GVRWKK 464


>gi|187776555|ref|ZP_02993028.1| hypothetical protein CLOSPO_00067 [Clostridium sporogenes ATCC
           15579]
 gi|187775214|gb|EDU39016.1| hypothetical protein CLOSPO_00067 [Clostridium sporogenes ATCC
           15579]
          Length = 465

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 174/488 (35%), Positives = 258/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDSIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I++A +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKKANEE------GITVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G+R+     
Sbjct: 113 ATEFMDEIIRFVSDLIEKGYAYEIDGDVYFSTKRFGDYGKLSGQNLEELQLGSRINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGVRWKQ 464


>gi|329767862|ref|ZP_08259376.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328838650|gb|EGF88249.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 465

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 181/487 (37%), Positives = 265/487 (54%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL ++    + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L +   E 
Sbjct: 2   IKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++ N TD+DDKII+ + +E        + S +T K    F KD   L C   T  PR
Sbjct: 61  -VDFISNFTDVDDKIIKASNEE------GISTSELTDKYINAFFKDYDALGCKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  I  ++  G AYEA+ ++ F T    +YG  S++ ID+   G R+    H
Sbjct: 114 VTEYMQEIIKFIAKLVEEGFAYEADGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGEH 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++ P E  W+SP+G GRPGWHIECS M+   LG+  DIH GG DL FPH
Sbjct: 174 KEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGETIDIHAGGQDLTFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C +     +N W+HN F+N++  KMSKS GNF  + +++            
Sbjct: 234 HENEIAQSECHNHAS-FSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIA-------EIDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA---- 350
            V+RL ML  HYR PI++T++ +  A+    K   +  +          +  +D      
Sbjct: 286 MVLRLFMLTVHYRTPINYTLENIELAKTNFEKIKTSYQNLQFRLNNEMTEEKLDTEVVTL 345

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----IL 392
                      + +D NT +A+ + +++ R S         N + L + NA+      IL
Sbjct: 346 VTEELDKFEEYMQDDFNTANALSSWYEIVRISNSYTAKETVNKETLELINAAFETYSSIL 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           GI V ++  N   S  IE L+ ER    K + F+ AD IR  L+ +G ILED K      
Sbjct: 406 GINVKED--NTLDSEHIESLIAEREAARKNRDFALADKIRDDLKEQGIILEDTK------ 457

Query: 453 RMTRWKQ 459
           +  RWK+
Sbjct: 458 QGVRWKK 464


>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 484

 Score =  556 bits (1433), Expect = e-156,   Method: Composition-based stats.
 Identities = 174/504 (34%), Positives = 257/504 (50%), Gaps = 69/504 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  +F  ++   +RMYVCG TV ++AHIG+ R  + +DV+ R L Y   E 
Sbjct: 2   LRVYNTLSRKKEKFTPLETGKVRMYVCGLTVQNYAHIGHIRSAVNYDVIRRYLEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TDI++KI+ RAR+E            +  K T+ +++D  ++         R
Sbjct: 61  -VTYVQNFTDINEKIVARAREEGLRPL------ELADKYTKAYLEDIEKMKIKRADVYCR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+ I ++I +++ ++  G+AYE N  + F      +YG  S R ++E + G RV     
Sbjct: 114 ATDTIKEIIKMVKKLLDKGYAYEVNGNVYFSVEKFSDYGKLSGRNLEEMQAGARVEVNEE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK++   E  W+SPWG+G PGWHIECSAMS  YLGK  DIHGGG DLIFPH
Sbjct: 174 KRHPMDFALWKKAPAGEISWDSPWGKGWPGWHIECSAMSIKYLGKRIDIHGGGTDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     W+HNG +NL+G KMSKS GNF T+ E+L       + +  
Sbjct: 234 HENEIAQSESCTGEKPFVKYWLHNGSVNLKGEKMSKSLGNFFTVREIL-------KEFKP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGII----------- 347
             +R  +L  HYR PIDF  + +  A     K   T         KG+I           
Sbjct: 287 DEVRYFLLTKHYRSPIDFNFEEVEAARKSWRKLVNTYQVMVQILEKGVITKNKITENTKG 346

Query: 348 -----------DPAVLSALYNDLNTVSAIQALHKLARESTK----------------NHD 380
                      +     A+ +D NT  A   +H+LARE                      
Sbjct: 347 ENTIISILNKKEKEFEEAMDDDFNTARATGVMHELAREINTFVNSPEFELNGETSKVLKK 406

Query: 381 LLPIFNASAHILGIEVC----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              +F+  + ILG+++      E  N+ ++  ++ +++ R    + K +  AD IR  LE
Sbjct: 407 AQNLFDRFSDILGLDLAFSSSDEVDNEILNNLVDFILEIRDEARQEKNWQLADRIRDGLE 466

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
             GF ++D           RW++K
Sbjct: 467 DLGFEIKDT------PHGVRWERK 484


>gi|90962221|ref|YP_536137.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|123269889|sp|Q1WSS5|SYC_LACS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|90821415|gb|ABE00054.1| Cysteinyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 470

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 171/491 (34%), Positives = 257/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +  +F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ +++      +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSALNVKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID+ + G        
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 185 KKN----PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            ++    P DF LWK+    E  W SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKVKQGEISWNSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KKVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++     +           L+  +   
Sbjct: 346 VEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IE+L+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFSEEK--ELLDDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT--- 460

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 461 ---AQGTRWKR 468


>gi|119713265|gb|ABL97331.1| cysteinyl-tRNA synthetase [uncultured marine bacterium HF10_12C08]
          Length = 454

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 214/475 (45%), Positives = 290/475 (61%), Gaps = 38/475 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T      +F+ IDP+N+RMYVCGPTVYD+AH+GNARP+IVFD+L+RLL+  YG
Sbjct: 1   MDLMLYDTFTNSKKKFEPIDPNNVRMYVCGPTVYDYAHVGNARPVIVFDILFRLLQKIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKII  A  +      N+ I ++T K    F  D   +  L PT +
Sbjct: 61  SGNVTYVRNITDVDDKIILAANDQ------NEDIGMLTEKTINYFHDDAKYVGALKPTFE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI LI+ +I    AY A+  ++F ++    YG  S + +DE   G+RV  +
Sbjct: 115 PRATEHIPEMIELIEKLISKEFAYVADGNVLFSSNKFKEYGKLSGKNLDEMVAGSRVGVE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK  +DF+LWK S   EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGG DLIF
Sbjct: 175 SYKKEESDFVLWKPSKEDEPSWKSPWGDGRPGWHIECSAMSEKLLGENFDIHGGGQDLIF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA+  +  AN W+HNGF+ +EG KMSKS+GNF+T+NEL +       S+
Sbjct: 235 PHHENEIAQSECANNNK-FANYWVHNGFVTVEGNKMSKSDGNFVTVNELKD-------SF 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIIDPAVLSAL 355
              VIRL M+ THYR+P+++T   L E++  L KW    ++           D  ++  L
Sbjct: 287 QGEVIRLTMISTHYRQPLNWTKDNLNESKKTLDKWYTFLSNFNGDELKDANNDNEIMETL 346

Query: 356 YNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGIEVC---------KEHLNKNI 405
            +D+NT  AI  LH+  +E  + +  L+  F  SA++LG+            KE+LN N 
Sbjct: 347 LDDMNTPKAISVLHQKFKECQSGDKGLVSNFLYSANMLGLLNEKPSEWLSWKKENLNIN- 405

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  +E L+ +R      K F  AD IR +L+  G ILED  +       T WK K
Sbjct: 406 TAQVELLIAQRNEARSNKNFDDADRIRNELDKMGVILEDQGD------ETTWKVK 454


>gi|56478148|ref|YP_159737.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|61216130|sp|Q5P1H8|SYC_AZOSE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56314191|emb|CAI08836.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 461

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 186/482 (38%), Positives = 258/482 (53%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL R+   F  I P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    E 
Sbjct: 2   LHIHNTLTRRKEAFVPIAPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA ++       ++I  +T +      +D   L  L P H+PR
Sbjct: 61  -LTYVRNITDIDDKIIRRAGEK------GESIRTLTDRFIAAMHEDADALGVLRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ QM  LI  +   G AY A N ++ +      +YG FS + +DE + G RV    
Sbjct: 114 ATEYVMQMQSLIGRLRDKGLAYVAGNRDVCYSVRKFDSYGRFSGKSLDELRAGERVEVAG 173

Query: 184 HKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +    P E  W SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL
Sbjct: 174 DKQDPLDFVLWKHARTDEPDEVKWASPWGAGRPGWHIECSAMSSDLLGEQFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++LE       
Sbjct: 234 QFPHHENEIAQSEGAHG-HTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLER------ 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
            +   V+R  +L  HYR P++++   L +A   L++      +    D            
Sbjct: 287 -FDPEVVRFFILRAHYRSPLNYSDAHLEDARQALTRLYTALRNVQPSDAQVDWDEPHAMR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHILGIEVC 397
             +A+ +D NT  A+  L +LA E+ ++                       A  L   + 
Sbjct: 346 FRAAMDDDFNTAEAVAVLFELANEANRSGSAATAAQLKGLGGVLGLLAREPASFLQGRMA 405

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            E  +K   +AIE +++ R +  K K ++ AD IR QL + G +LED          T W
Sbjct: 406 GEP-DKGEGVAIESMIERRALAKKSKDYAEADRIRAQLLASGIVLEDT------PHGTVW 458

Query: 458 KQ 459
           ++
Sbjct: 459 RR 460


>gi|170754736|ref|YP_001783143.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|229558626|sp|B1IGH6|SYC_CLOBK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169119948|gb|ACA43784.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 465

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 175/488 (35%), Positives = 257/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEE------GSTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGVRWKQ 464


>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|61216194|sp|Q6FC71|SYC_ACIAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 473

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 189/488 (38%), Positives = 266/488 (54%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF    P +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKPGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG--WDV 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +       N+ I  +TS+      +D  +L C  P   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------NETIQQLTSRFIDAMNEDAAKLGCAEPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I +M  +I  ++  G AY A N ++ F+ S    YG  S RK+++ + G   RV  + 
Sbjct: 118 EYIGEMQNMISTLVDKGSAYPASNGDVYFEVSKFEKYGRLSGRKLEDMQAGASERVDIEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL FP
Sbjct: 178 EKKHPFDFVLWKGAKPNEPSWVSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLTFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------DPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++     +   +         D   +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYEQVYGQNDSTQKDEQFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKN-----HDLLPI----FNASAHILGI------E 395
              A+ +D NT  AI  L +L RE  +       +   I          ILG+      E
Sbjct: 350 FNIAMRDDFNTPEAIAVLFELNRELNRAVKEQQAEQAAIYYVTLRHLTQILGLVQHDVDE 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + + +       I+ ++Q+R    K K FS AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEVLSLSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTLWRR 471


>gi|262277058|ref|ZP_06054851.1| cysteinyl-tRNA synthetase [alpha proteobacterium HIMB114]
 gi|262224161|gb|EEY74620.1| cysteinyl-tRNA synthetase [alpha proteobacterium HIMB114]
          Length = 448

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 217/465 (46%), Positives = 287/465 (61%), Gaps = 28/465 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL R   +F  ID  NIRMYVCGPTVYD+ H+GNARP+IVFD+L+RLL   Y   
Sbjct: 3   LKISNTLTRSKEKFIPIDEKNIRMYVCGPTVYDYPHVGNARPLIVFDLLFRLLSKIYSTS 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKIIE + +         +I  +TSK T+ F  D   L CL PT +P+
Sbjct: 63  KVTYVRNITDIDDKIIEASNKSK------ISIQDLTSKVTKDFHDDCNYLGCLNPTIEPK 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ +MI LI+ +I +  AYE+N  + F  +    YG+ S +KI+E   G+RV    +
Sbjct: 117 ATEHLNEMINLIKKLIQNDFAYESNGHVYFQVTKFKKYGNLSNKKIEELISGSRVEVSDN 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK S   EP W+SP+G+GRPGWH+ECSAMS  YLG  FDIHGGGLDLIFPH
Sbjct: 177 KKEPGDFVLWKPSKENEPSWDSPFGKGRPGWHLECSAMSEKYLGNHFDIHGGGLDLIFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA+  EK +N W+HNG++ +E +KMSKS GNFITINEL        +++  
Sbjct: 237 HENEIAQSTCANNNEKFSNYWLHNGYVTVEKQKMSKSLGNFITINEL-------KKNYNG 289

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVLSALYNDLNTVS 363
            V+RLAML THY +P D+  + L  ++  L KW +  S  K  I    L  L +DLNT  
Sbjct: 290 QVVRLAMLSTHYTQPFDWNEKILDVSQKSLDKWYEFYSDEKEEISEENLKFLLDDLNTPL 349

Query: 364 AIQALHKLARESTKNHDL-LPIFNASAHILGIEVC-------KEHLNKNISIAIEKLVQE 415
            I  +H+L +++     L     ++S  ILG+           + + K  +  IEKL+ E
Sbjct: 350 MISNIHELYKKAKTGDSLSAKQLSSSCKILGLFNQTHDEWKNFKKIGKITAEEIEKLISE 409

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           R      K F ++D IR  L SKG +++D K+      +T W+ K
Sbjct: 410 RNKARSKKDFKTSDEIRDLLVSKGVLIKD-KDG-----ITTWEYK 448


>gi|187924487|ref|YP_001896129.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187715681|gb|ACD16905.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 465

 Score =  556 bits (1432), Expect = e-156,   Method: Composition-based stats.
 Identities = 174/484 (35%), Positives = 256/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQEGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIRRA------VENGETIKALTDRFIDALHEDADALGIQRPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEQLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIID------ 348
              + A V+R  +   HYR P++++   + +A   L++              +D      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDAAELDWNEAHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL----- 401
               +A+ +D NT  A+  L +LA E  +  D  L     +   ++G+   +        
Sbjct: 346 QRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVIGLLGREPRAYLQQA 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                       AIE  +  R+   + K +++AD IR +L   G  LED          T
Sbjct: 406 AGAAAEGALEPAAIEAKIAARVAAKQAKDYAAADRIRAELLEAGVALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|254785975|ref|YP_003073404.1| cysteinyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|259511843|sp|C5BI15|SYC_TERTT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|237685828|gb|ACR13092.1| cysteine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 458

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 201/478 (42%), Positives = 279/478 (58%), Gaps = 42/478 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNT  R+  +F  +DP+ I+MYVCGPTVY+  HIGNARP++VFD L+R+L+Y Y 
Sbjct: 1   MSLRIYNTATRQKEDFVPVDPAAIKMYVCGPTVYNLVHIGNARPVVVFDTLFRVLQYLY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RNITDIDDKI++ A +        + IS + ++   ++ +D  +L  L PT  
Sbjct: 60  -DNVIYARNITDIDDKIMKAAAEN------GEPISALAARYAAEYERDMAQLNALQPTIV 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+ QMI + Q ++  GHAY A+  ++FD  S+ +YG  S R +++   G RV   
Sbjct: 113 PYATEHLEQMIAMTQALVNKGHAYAADGHVLFDVQSMGDYGELSNRSLEDMLDGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK   DF+LWK S   EPGWESPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIF
Sbjct: 173 PYKKYAGDFVLWKPSADAEPGWESPWGRGRPGWHLECSAMIEKHLGNTIDIHGGGRDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS CA   E+    W+HNG++N++G KMSKS GNF T+ ELLE       S+
Sbjct: 233 PHHENERAQSQCAHDGEQYVKYWMHNGYINIDGEKMSKSLGNFRTVRELLE-------SF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-QTSTSKGIIDPA--------VLS 353
           P  VIR A+L   YR  +DF+ + L +++  L         ++  I PA          +
Sbjct: 286 PGEVIRFALLSAQYRSELDFSAELLEQSKASLDSLYGALRKTEEEILPAGPALAASPGFA 345

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIEVCKEHL----- 401
           AL +DLNT  AI  LH+LAR       ES +      +  A A+++G+            
Sbjct: 346 ALMDDLNTPLAISELHQLARTVHKAEPESEEAQSAKGMMLALANLMGLLQEDPETWFQGG 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +     IE L+ ER      K+++ AD IR++L++KG +LED +        T WK+
Sbjct: 406 AEQDVSWIEALIAERQQAKLDKQYARADEIREELKAKGILLEDSR------EGTTWKK 457


>gi|226950955|ref|YP_002806046.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|254781234|sp|C1FMX3|SYC_CLOBJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226842951|gb|ACO85617.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 465

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 175/488 (35%), Positives = 256/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEE------GSTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKSALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGVRWKQ 464


>gi|73748013|ref|YP_307252.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|109894897|sp|Q3ZWG4|SYC_DEHSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|73659729|emb|CAI82336.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 457

 Score =  555 bits (1431), Expect = e-156,   Method: Composition-based stats.
 Identities = 175/477 (36%), Positives = 241/477 (50%), Gaps = 42/477 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ +F  ++   ++MYVCG T     HIG+A   I FDV+ R L Y     
Sbjct: 1   MKIYNTLSGKLEKFVPLENGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII +A  +          S +  +N   F+     L      + PR
Sbjct: 59  RVKYIQNFTDIDDKIIAKANAQ------GIEPSTLAERNIGVFLDAMAALNITPADYYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +P++I ++  +I  G+AY     +      +  YG  S R +++   G RV     
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYAVGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------PAVL 352
             +R+ +L + YR P+ ++ + L  AE    +  QT+  K                    
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETAVDTKAYRERFT 345

Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIE--VCKEHLNK 403
             + ND NT +A+  +  L+RE         K+ D   +F   A ILG+   V +     
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKTGT 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +++  IE L++ R  L   K++  AD IR  L++ G +LED          T WK K
Sbjct: 406 DVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLEDS------AGGTVWKVK 456


>gi|322807828|emb|CBZ05403.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 465

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 174/488 (35%), Positives = 256/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEE------GSTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  ++LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTARQILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKEIVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGVRWKQ 464


>gi|156742112|ref|YP_001432241.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156233440|gb|ABU58223.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 478

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 180/498 (36%), Positives = 249/498 (50%), Gaps = 61/498 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYNTL R +  F+ ++P  ++MYVCG TVYD AHIG+A   IVFDV+ R L Y   
Sbjct: 1   MSIRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V N TD+DDKII RA        +      +      +F++D   L        
Sbjct: 61  --AVQHVVNFTDVDDKIINRA------HALGRDPKELAESYIAEFLEDLEALNVKRAHIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  +P++   I  +I  GHAY  + ++ F  S+ P+YG  SRR +D+   G R+   
Sbjct: 113 PRATETMPEIQRFISRLIETGHAYVVDGDVYFRVSTAPDYGKLSRRSLDDMIAGNRIGID 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NPADF LWK + P EP W+SPWG GRPGWHIECSAM+  +LG+  DIHGGG DLIF
Sbjct: 173 ERKENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGTDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEG---------RKMSKSNGNFITINELLE 293
           PHHENEIAQ+      +  A  W+HNG L ++           KMSKS GN +TI E L 
Sbjct: 233 PHHENEIAQTESLTG-KTFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLA 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------- 340
                   +   V+RL +L + YR P+ F  +   + E  L++                 
Sbjct: 292 R-------YHPDVLRLTVLSSSYRSPLAFGEEIAADQERKLARLRSALEPPIGTIEAGPA 344

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
                 +        ++A+ +D NT  A+ AL  L R      D              F 
Sbjct: 345 VEVLLAAVRTARERFIAAMDDDFNTAGALAALFDLVRSINTARDAGVGGAPFAEAQATFR 404

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+ +     + +  +  I+ LV+ R  L K K+F+ AD +R +L   G +LED 
Sbjct: 405 ELVDVLGLTLIAPRPVTQQAAPFIDLLVEVRSELRKAKQFALADMVRDRLAQLGVMLEDT 464

Query: 446 KNPDNGQRMTRWKQ--KP 461
                  + TRWK   KP
Sbjct: 465 ------PQGTRWKVTDKP 476


>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 465

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 250/484 (51%), Gaps = 52/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT      +F  I+P   R+YVCG T YD  HIG+AR  + FD + R L Y   E 
Sbjct: 2   IRLYNTQSSSKEDFIPIEPGKARIYVCGVTTYDHCHIGHARSAVAFDSIRRYLSYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII RAR+        +    +  +   +  +D   L  L PT  PR
Sbjct: 61  -VTFVKNYTDIDDKIINRAREN------GEEWKALAERFISEHDRDMAALYVLPPTIAPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+MI LI+ ++ +G+AY+  ++I F       YG  S + +++ + G+RV     
Sbjct: 114 ATEHLPEMIALIEKLLDNGYAYKGGDDIFFRVHRFTEYGKLSHKALEDLQSGSRVEVNPL 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK     EP WE+ +G GRPGWHIECSAM   +LG+VFDIHGGG DLIFPH
Sbjct: 174 KENPLDFVLWKGKKEGEPSWEASFGAGRPGWHIECSAMGHKHLGRVFDIHGGGKDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS         A  WIHNGF+N+   KMSKS GNF TI E+L       + +  
Sbjct: 234 HENEIAQSQAGYGCAP-ARYWIHNGFVNINNEKMSKSLGNFFTIKEIL-------QHYDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------KGIID 348
            V+RL +  THYR PIDF  + +T A   L K  +   +                   I 
Sbjct: 286 EVLRLFLAQTHYRSPIDFCEENMTMARQALEKLYRFLENFENHEDTRTSDSIAPVLSDIT 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNA---SAHILGIE------ 395
                A+ +D N+  A+ +L +      K    + D   I++       +LGI       
Sbjct: 346 RKFEEAMDDDFNSALALASLFEGVHTLNKLNPSSADAKGIYDTYCRLGDVLGIFQSLPSQ 405

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
              ++  ++  +  I   ++ R    + K F++AD IR +L   G  ++D K        
Sbjct: 406 WFARQSTSQLSADEIAARIEARNAARRDKDFATADRIRDELLENGVEIKDSK------EG 459

Query: 455 TRWK 458
           T W+
Sbjct: 460 TSWR 463


>gi|312862597|ref|ZP_07722838.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311101857|gb|EFQ60059.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 447

 Score =  555 bits (1430), Expect = e-156,   Method: Composition-based stats.
 Identities = 167/468 (35%), Positives = 247/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFIPLTENVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYCGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +         +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------AGISTKELSDKFITAFMEDTAQLGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             N++ ++I  +  +I  G AY A  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSTLIDKGFAYVAEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R  +    YR+PI+FT + + +AE+ L     T                   A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + +  L  +A+       +  +   F     + GI   +E L+++    
Sbjct: 346 QVAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKMLQVFGIVFEEEVLDED---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 402 IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|91788726|ref|YP_549678.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|122967676|sp|Q129L2|SYC_POLSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91697951|gb|ABE44780.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 462

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 175/483 (36%), Positives = 248/483 (51%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R +  F  + P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+    
Sbjct: 1   MSLRIYNTLSRDVEVFSPLLPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN+TDIDDKII+RA      +   + I  +T +      +D   L    PTH+
Sbjct: 61  K--VTYVRNVTDIDDKIIKRA------VENGETIRSLTDRMVVALHQDADALGIERPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-----NEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           PRAT+ +PQM+ LI  +   G AY+        ++ +       YG  S + +DE + G 
Sbjct: 113 PRATDFVPQMLSLIGTLEKKGLAYQTQSGSGQGDVNYAVRKFDGYGKLSGKSLDELRAGE 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           RV     K +P DF+LWK + P EP    W+SP+G GRPGWHIECSAM+   LG+ FDIH
Sbjct: 173 RVEVLDGKDDPLDFVLWKSAKPSEPDDAKWDSPYGPGRPGWHIECSAMACELLGESFDIH 232

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI E+L  
Sbjct: 233 GGGADLQFPHHENEIAQSEGAFG-KPLAGTWMHNGFVRVDNEKMSKSLGNFFTIREILA- 290

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------K 344
                  + A  +R  ++  HYR P++++   L +A   L +                  
Sbjct: 291 ------KYDAETVRFFIIRAHYRSPLNYSDAHLDDARNSLKRLYTALDLVSPAVVAIDWT 344

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCK---- 398
                   +A+  D  T  A+  L  LA E  K    +L  +  +    LG+        
Sbjct: 345 NPFAARFKAAMDEDFGTPEAVAVLFDLAGEVNKTRSAELAGLLKSLGGCLGLLQSAPGSY 404

Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +        +I++L+ +R    K K F+ AD IR  L  +G +L+D          T W
Sbjct: 405 LQAGAGLDDASIQRLIAQRADAKKTKNFAEADRIRNDLLGQGIVLKDS------PAGTTW 458

Query: 458 KQK 460
           + +
Sbjct: 459 EVQ 461


>gi|153940395|ref|YP_001392856.1| cysteinyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|187629802|sp|A7GJ96|SYC_CLOBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152936291|gb|ABS41789.1| cysteine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295320834|gb|ADG01212.1| cysteine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 465

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 175/488 (35%), Positives = 257/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEE------GSTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINIDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +     + 
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGVRWKQ 464


>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|259511829|sp|C4XSW5|SYC_DESMR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 485

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 176/499 (35%), Positives = 244/499 (48%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ R    F +  P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII++A  E            I  +    F +D  +L  L P  +P+
Sbjct: 60  -VTFVRNFTDVDDKIIKKANAE------GTTSQEIAERYIATFYEDMDKLGILRPNAEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I +M  L Q +I  GHAY   + ++ F   S   YG  S R +++ + G RV    
Sbjct: 113 ATEYIGEMASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP WESP+G GRPGWH+ECSAMS   LG   DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E     W+HNGF+ +   KMSKS GNFITI ++          + 
Sbjct: 233 HHENEIAQSEAAIGGE-FCRYWVHNGFVRINTEKMSKSLGNFITIRDIYAR-------YL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
             V+R  +L + YR P+D++ Q L EAE  + +                           
Sbjct: 285 PEVLRFFLLSSQYRSPLDYSDQGLDEAEKGIKRIYAAKVQMEQALGRAKWSETKLPADVT 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                 +    +A+ +DLNT  A+  +  L R + +  +                +L  F
Sbjct: 345 EELSRHEEGFTAAMDDDLNTAQAMGHVFGLVRLAGRLMEDKTLAKSRETAEVLGRILADF 404

Query: 386 NASAHILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
              A +LG            ++ C+       +  ++ LV ER    K K F+ +D IR 
Sbjct: 405 GVWAEVLGVFGTDATAFLADLKACRLTRLGIDAARVDGLVAERQDARKAKDFARSDAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L S G  + D        
Sbjct: 465 ELASLGVTVMDTPTGPQWD 483


>gi|308070997|ref|YP_003872602.1| Cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Paenibacillus
           polymyxa E681]
 gi|305860276|gb|ADM72064.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Paenibacillus
           polymyxa E681]
          Length = 467

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 169/491 (34%), Positives = 251/491 (51%), Gaps = 57/491 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNT+ R    F  ++P  ++MYVCGPTVYD+ HIGNARP+IVFDV+   L Y   
Sbjct: 1   MPLQIYNTMTRSREPFAPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I +AR+      ++  +S +  K    + +D   L   A +  
Sbjct: 61  D--VNYVVNFTDVDDKLIRKARE------LDMDVSAVAEKFIAAYYEDLAGLNVPAASMN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  +  +I  I+ ++  G+AYE + ++ + T    +YG  S + ++E + G R+   
Sbjct: 113 PRVTESMDLIIDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+N  DF+LWK + P E  W SPWG GRPGWHIECSAM+ HYLG   DIHGGG DL F
Sbjct: 173 ERKENAEDFVLWKAAKPGEIHWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE E AQS      +  +  W+HNG++ ++  KMSKS GN I + +L    K      
Sbjct: 233 PHHECECAQSEVITG-KPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRAHHK------ 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
               +R  ML THYR P+++  + +++AE  + +      +                   
Sbjct: 286 -PEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLANALEGNGEVSTEL 344

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
                 I       + +D NT  AI A+     E+            +   +L  F++  
Sbjct: 345 QTKLDGILQQFGEKMNDDFNTPDAITAVFDWVSEANHLLQRDVVHQAELQAVLHTFHSMN 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +L I    E   + +   IE+L+ ER+   K K +S AD IR  L +KG +LED     
Sbjct: 405 SVLRI--YSEPSEELLDDEIEQLIAERVEARKTKNWSRADEIRDLLAAKGIVLEDT---- 458

Query: 450 NGQRMTRWKQK 460
              +  RW++K
Sbjct: 459 --AQGMRWRRK 467


>gi|322377813|ref|ZP_08052302.1| cysteine--tRNA ligase [Streptococcus sp. M334]
 gi|321281236|gb|EFX58247.1| cysteine--tRNA ligase [Streptococcus sp. M334]
          Length = 447

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 171/468 (36%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQTFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +     +   + GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALASMLEVFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|322374782|ref|ZP_08049296.1| cysteine--tRNA ligase [Streptococcus sp. C300]
 gi|321280282|gb|EFX57321.1| cysteine--tRNA ligase [Streptococcus sp. C300]
          Length = 447

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDIQELQDFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +     A   + GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IETLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 472

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 178/487 (36%), Positives = 261/487 (53%), Gaps = 53/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL ++  EF+ I+P  +RMYVCGPTVY+  HIGNARP IVFD + R       E 
Sbjct: 2   IKIYNTLTKRKEEFKPIEPHKVRMYVCGPTVYNLIHIGNARPYIVFDTVRRYFESVGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKII++A +E        + + + ++  ++ +KD   L     TH PR
Sbjct: 61  -VNYVQNFTDVDDKIIKKANEE------GRSTNEVVTQYIEETLKDVNNLNVTPATHHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG--TRVPEK 182
            T  + ++I +I+ +I  G+AYE N  + FDT++   YG  S++ ++E + G   RV   
Sbjct: 114 VTEEMDRIIEMIKELIEKGYAYEINGTVYFDTAAFEQYGKLSKKVLEELEAGRSERVALT 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKN  DF+LWK     EP WESPW  GRPGWHIECSAM+  YLG   DIH GG DL+F
Sbjct: 174 EEKKNHMDFVLWKPKKEGEPYWESPWSNGRPGWHIECSAMAKRYLGDTIDIHAGGEDLVF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA+  E  A+ W+HN FLN++ +KMSKS GNF T+ ++       G  +
Sbjct: 234 PHHENEIAQSECANGKE-FAHYWMHNAFLNIDNKKMSKSLGNFKTLRDV-------GEMY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
              V+R  ML  HYR P++F+ + +  A+  L +                          
Sbjct: 286 GYDVVRFFMLNAHYRSPLNFSAELIESAKNSLERIKNAKATLSFALEHSQIADLTEEEKA 345

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASA 389
                          + +D NT  AI  + +L + +               +L +FN   
Sbjct: 346 LLKELDDFKARFHEHMEDDFNTADAISIIFELVKFANTYAKEGASQPFVEAVLKLFNELT 405

Query: 390 HILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ILG+   ++  N++      I++ +++R    K + F+ AD IR  L+ +G ++ED + 
Sbjct: 406 DILGLIYDRKGNNEDGLSDEEIKEYIEKRTAAKKARDFAEADRIRDFLKDQGVLIEDTRE 465

Query: 448 PDNGQRM 454
               +R+
Sbjct: 466 GVRFKRI 472


>gi|83719803|ref|YP_442471.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167581386|ref|ZP_02374260.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
 gi|167621097|ref|ZP_02389728.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|257138679|ref|ZP_05586941.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|109894888|sp|Q2SX78|SYC_BURTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83653628|gb|ABC37691.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 465

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 180/484 (37%), Positives = 251/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R   +F    P  +RMYVCG TVYD+ HIG+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +       D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------LENGETIQSLTRRFIDAMNADFDALGVERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           K  K +P DF+LWKR+ P EP    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 KDAKDDPLDFVLWKRAKPEEPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIID------ 348
              + A V+R  ++ THYR P++++   L +A   L++              +D      
Sbjct: 288 --KYDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVTPDAAPLDWSEAHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  A+  L +LA E  +  +  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLKRLAGLLGLLGREPREFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 AGAARTGALEPDEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|113477437|ref|YP_723498.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|123160290|sp|Q10XJ9|SYC_TRIEI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110168485|gb|ABG53025.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 489

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 176/506 (34%), Positives = 263/506 (51%), Gaps = 71/506 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R+   F+ ++P+ I+MYVCG TVYD+ H+G+AR  I +D + R L +   + 
Sbjct: 3   LKLYNSLTRQEETFEPLEPNIIKMYVCGVTVYDYCHLGHARSYIAWDTMRRYLIWQGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RAR+         ++  +  + T+ + +D  RL  L     PR
Sbjct: 62  -VRYVQNFTDIDDKILKRARE------TGSSMDSVAKRFTEAYFEDMKRLNVLEADEYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++  LI ++   G AY +  ++ +       YG  S R+++E + G        
Sbjct: 115 ATQNIDRIQNLIHDLEKKGFAYSSGGDVYYQVREFSQYGKLSGRRLEEMQAGASGRVDSE 174

Query: 185 ------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
                 KK+P DF LWK +   EP W+SPWG+GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 175 DLETAKKKDPFDFALWKAAKTGEPAWDSPWGKGRPGWHIECSAMVQDCLGETIDIHAGGA 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  +   +  A  W+HNGF+ + G KMSKS GNF TI +LL+     
Sbjct: 235 DLIFPHHENEIAQSEASTG-KILARYWLHNGFVTINGEKMSKSLGNFTTIRDLLD----- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------SK 344
            +      +R+ +L   YR+PIDFT + +  A+   +   +                 +K
Sbjct: 289 -QPVDPMALRMFVLTAQYRKPIDFTEEAIASAKNGWNTIKEGILFPYQYGPKLGWEMPAK 347

Query: 345 GIID---------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
            + D              A+ +D+NT +A+  L +LA++  +  ++L             
Sbjct: 348 NLSDQTLLLTSYLEKFQKAMDDDINTPAALAILFELAKDLRREGNVLIHEGKTETSLEEL 407

Query: 383 ----PIFNASAHILGIEVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYIRK 433
                   + + +LG+EV  E    NIS       IE L+Q+RL   K K +S AD IR 
Sbjct: 408 KKQWVTLVSLSQVLGLEVKIEEQVSNISEGLSNIEIESLIQQRLEAKKAKNYSEADRIRN 467

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
           +L+S+G  L D         +T W +
Sbjct: 468 ELQSQGIKLIDKSGG-----LTNWHR 488


>gi|238898628|ref|YP_002924309.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511836|sp|C4K6G8|SYC_HAMD5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229466387|gb|ACQ68161.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 461

 Score =  554 bits (1429), Expect = e-156,   Method: Composition-based stats.
 Identities = 183/482 (37%), Positives = 258/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT  RK   F  I P+ + MYVCG T+YD  HIG+AR  +VFDV+ R LRY     
Sbjct: 2   LKIFNTFNRKKELFTPIHPNTVGMYVCGVTIYDLCHIGHARTFVVFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII+RA Q H       +   +T++  ++  +D   L  L P  +PR
Sbjct: 60  SLTYVRNITDIDDKIIQRASQNH------QSCEALTAQMLKEMYRDFDELNLLRPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L Q ++   +AY A N +++F     P+YG  SR+ +++ + G RV    
Sbjct: 114 ATEHITEMITLTQQLLDQKYAYVAANGDVLFSVEKNPHYGLLSRQNLEQLQAGARVEVME 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK S P EP W SPWG GRPGWHIECSAM++  LG  FDIHGGG DL+FP
Sbjct: 174 SKHHPMDFVLWKMSKPNEPHWPSPWGEGRPGWHIECSAMNAKALGPHFDIHGGGADLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA +     N W+H+G + +   KMSKS  NF TI +LL       + + 
Sbjct: 234 HHENEMAQSICAHKA-PYVNCWMHSGMIMINKEKMSKSLNNFCTIRDLL-------QRYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
              +R  +L  HYR P+++T + L +A I L++                    +   +SA
Sbjct: 286 PETLRYFLLSAHYRSPLNYTEENLKQARIALTRLYTALRDTNQKAFPEGGESFEKRFVSA 345

Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L   ARE  K           L         +LG+            
Sbjct: 346 MNDDFNTPEAYAVLFDTAREINKLKKEHPKAADGLAAQLRKMGKVLGLLESGSLLSLLNP 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           E  +++ S  I  L+++R +    K +  AD  R +L   G ++ED +N       T W+
Sbjct: 406 EKDDRHQSAEIADLIEKRNLARAHKNWEEADNARTRLFEMGVVVEDTEN------GTNWR 459

Query: 459 QK 460
           ++
Sbjct: 460 RR 461


>gi|258509321|ref|YP_003172072.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257149248|emb|CAR88221.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259650602|dbj|BAI42764.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 468

 Score =  554 bits (1429), Expect = e-155,   Method: Composition-based stats.
 Identities = 175/492 (35%), Positives = 255/492 (51%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A          +A   +  +    F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIITAA------HKTGEAPLDLAQRFIDAFMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           A+  IP ++  +Q++I  G+AY  + ++ +      +YG  S + +DE + G        
Sbjct: 114 ASQMIPDIVDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      ++    W+HNGF+ +  + +KMSKS GNFIT++++L+T    
Sbjct: 234 EFPHHENEIAQSEAKTG-KQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDILKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------Q 339
                  V+R  M  T YR PI ++   L  A   L++                     Q
Sbjct: 290 ----DPQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAVAGVDAQ 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
            +     +    ++A+ +D+N  + +  L  LA+   +            +DLL  ++A 
Sbjct: 346 ITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+         N+   I+ LV+ R +    K F+ +D IR QL ++G ILED    
Sbjct: 406 LQIFGVVFTDP---TNLDANIDALVKARDVARAAKDFAKSDEIRDQLAAQGIILEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 460 ---PQGTRWRRK 468


>gi|300214882|gb|ADJ79298.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 470

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 172/491 (35%), Positives = 259/491 (52%), Gaps = 60/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL  +   F+ ++P  + MYVCGPTVY++ HIGNAR  + FD + R L Y   E 
Sbjct: 2   LQLYNTLTNQKERFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ +++      +N ++  IT K    F +DT+ L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSVLNIKKATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +++  +I  I+ ++  G+AYE+  ++ + T    +YG  S + ID+ + G        
Sbjct: 114 VMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDDI 173

Query: 185 KKN----PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            ++    P DF LWK++   E  W+SPWG+GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 DQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +K A  W+HNGF+ +  E +KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIR  M  T YR PI ++   L EA++ L+K                     +
Sbjct: 287 -KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDKE 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
              +   ++   +  + +D N  + I  ++++A++               ++L+  +   
Sbjct: 346 VEANFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKKV 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI   +E   + +   IEKL+QER    K K F  +D IR  L+ +G ILED    
Sbjct: 406 VEIFGISFNEEK--ELLDDTIEKLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT--- 460

Query: 449 DNGQRMTRWKQ 459
               + TRWK+
Sbjct: 461 ---AQGTRWKR 468


>gi|116627043|ref|YP_819662.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100320|gb|ABJ65466.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312277506|gb|ADQ62163.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
           ND03]
          Length = 447

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 166/469 (35%), Positives = 253/469 (53%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENTVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +      +  +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------VGISTKELSDKFITAFMEDTAQLGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             N++ ++I  +  +I  G AY +  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
               V+R  +    YR+PI+FT + + +AE+ L     T           +  +  +D A
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLD-A 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + +  L  +A+       +  +   F     + GI   +E L+++   
Sbjct: 345 FQAAMDDDFNTANGVTVLFDMAKWINSGNYDETVKNAFEKILQVFGIVFEEETLDED--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 402 -IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|55820186|ref|YP_138628.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822074|ref|YP_140515.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|61216120|sp|Q5M1W6|SYC_STRT1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216121|sp|Q5M6F6|SYC_STRT2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55736171|gb|AAV59813.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738059|gb|AAV61700.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 447

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 166/469 (35%), Positives = 253/469 (53%), Gaps = 41/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENTVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +      +  +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------VGISTKELSDKFITAFMEDTAQLGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             N++ ++I  +  +I  G AY +  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
               V+R  +    YR+PI+FT + + +AE+ L     T           +  +  +D A
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLD-A 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
             +A+ +D NT + +  L  +A+       +  +   F     + GI   +E L+++   
Sbjct: 345 FQAAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKILQVFGIVFEEETLDED--- 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            IEKL++ER      K F++AD IR +L ++G  L D K    G R TR
Sbjct: 402 -IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|320162457|ref|YP_004175682.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
 gi|319996311|dbj|BAJ65082.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
          Length = 468

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 183/485 (37%), Positives = 253/485 (52%), Gaps = 53/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   F+ ++P  +RMYVCGPTVY+ AH+G+A   +VFD++ R L Y   + 
Sbjct: 3   LKIYNTLTRKKEPFETLEPGKVRMYVCGPTVYNKAHVGHAMSALVFDIIRRYLEYRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +  N TD+DDKII RA Q      +      +     Q++ K+   L  L  T  PR
Sbjct: 62  -VKHAMNYTDVDDKIILRASQ------LGMDPFALAETYIQEYRKNLEDLNVLPATINPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I Q+I +IQ +I  G+AY A N ++ F  +   +YG  S RK+DE + G R+    
Sbjct: 115 ATQEIDQIIAIIQGLIEKGYAYPAPNGDVYFRVTRDEDYGRLSGRKLDEMQAGARIEVGE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+ H+LG+  DIHGGG DLIFP
Sbjct: 175 QKEHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMNLHHLGEQIDIHGGGNDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      +  A  W+HNG L   G KMSKS GN +TI E L           
Sbjct: 235 HHENEIAQSESYTG-KPFARYWVHNGMLQFGGEKMSKSLGNLVTIEEFLARH-------D 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDPA-------- 350
           A V+RL +L + YR P+ F    + + E  L +      P    + GI   A        
Sbjct: 287 ADVLRLMVLNSGYRAPLTFNDDVIEQTERALERLKSALRPALPGAAGISAEAVKALEEQA 346

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNASAHILGI 394
                    A+ +D NT  A+  L +L R                    +    A +LG+
Sbjct: 347 RAARAGFEEAMDDDFNTAGALSHLFELVRAINSARTEGATDEQLRVGQDVLRELAGVLGL 406

Query: 395 EVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            +  +E   +  +  I+ L++ R  L K K ++ +D IR +L + G  LED +       
Sbjct: 407 RLRMEEEKPQEAAPFIDLLIEVRTELRKQKLWALSDLIRDRLTALGVTLEDTR------E 460

Query: 454 MTRWK 458
            T W+
Sbjct: 461 GTTWR 465


>gi|34762389|ref|ZP_00143391.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887971|gb|EAA25037.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 473

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 180/492 (36%), Positives = 272/492 (55%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L       + +
Sbjct: 234 PHHENERAQSKCGCGG-TFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KYF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P++F+   L + +  L +   T                      
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
            +K  I+   + A+  D NT  A+  + +L +   K  D + I                 
Sbjct: 346 ATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLVM 405

Query: 390 ---HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|293364920|ref|ZP_06611637.1| cysteine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307703173|ref|ZP_07640119.1| cysteinyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291316370|gb|EFE56806.1| cysteine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623248|gb|EFO02239.1| cysteinyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 447

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/468 (36%), Positives = 247/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVSFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPLEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + +++  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVTDLVEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQAFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N+ + I  + ++A+       +  +     A   + GI   +E L+ +    
Sbjct: 346 VAAMDEDFNSANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|75909922|ref|YP_324218.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|109894882|sp|Q3M6R3|SYC_ANAVT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|75703647|gb|ABA23323.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 486

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/500 (34%), Positives = 250/500 (50%), Gaps = 58/500 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R+    + ++P  ++MY CG TVYD+ H+G+AR  IV+D + R L +   
Sbjct: 1   MTLTIYNTLTRRQEPLETVEPGKVKMYCCGVTVYDYCHLGHARSYIVWDTIRRYLIWRGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y++N TDIDDKI+ RA+++         ++ ++++    +  D  RL  L     
Sbjct: 61  E--VKYIQNFTDIDDKILNRAKEQ------GSTMAEVSNRFIDAYFADIRRLNVLDADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PR T HIP++  LIQ +   G AY    ++ +     P+YG  S R++++ + G      
Sbjct: 113 PRVTEHIPEIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVD 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               +  K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM    LG   DIHGGG
Sbjct: 173 VEDSEPKKQHPFDFALWKAAKPGEPAWDSPWGQGRPGWHIECSAMIRSKLGATIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET-KK 296
            DLIFPHHENEIAQS  A   +  A  W HNG + + G+KMSKS GNFITI ELL+    
Sbjct: 233 GDLIFPHHENEIAQSEAAMN-QPLARYWTHNGMVMVNGQKMSKSLGNFITIRELLDGVGS 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
           + G       +RL +L  HYR+P+DFT + +  AE                     W Q 
Sbjct: 292 WKGDPVNPMAVRLFVLQAHYRKPLDFTEEAIANAENSWKTLKEGLLFGYQYGEKLGWGQE 351

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
           S     +         +D N    +  L +LA+E  +  ++L                  
Sbjct: 352 SAIIPELATRFQELGDDDFNFSGGLAVLFELAKELRREGNILVHEGTTKTPSDELQRQWN 411

Query: 384 IFNASAHILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                  +LG+E   +             IE L+++R    K K FS +D IR +L+++G
Sbjct: 412 TLVTLGKVLGLEATPDDETLTQPGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQG 471

Query: 440 FILEDYKNPDNGQRMTRWKQ 459
             L D        + TRW +
Sbjct: 472 VTLIDS------PQGTRWHR 485


>gi|168178810|ref|ZP_02613474.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182669931|gb|EDT81907.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 465

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 175/488 (35%), Positives = 256/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEE------GSTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 TQGVRWKQ 464


>gi|56752435|ref|YP_173136.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81300471|ref|YP_400679.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|61216122|sp|Q5MZA4|SYC_SYNP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894954|sp|Q31MM7|SYC_SYNE7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56687394|dbj|BAD80616.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81169352|gb|ABB57692.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 478

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 179/496 (36%), Positives = 246/496 (49%), Gaps = 58/496 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F+ +   ++ +Y CG TVYD+ H+G+AR  IV+D L R L +   
Sbjct: 1   MTLSLYNTLTRQKQRFEPLQAGSVSLYCCGVTVYDYCHLGHARSYIVWDTLRRYLLWLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N TDIDDKI+ R+RQE         +  I  + TQ + +D  RL  L     
Sbjct: 61  --RVRYVQNFTDIDDKILRRSRQE------GTTMQAIADRYTQAYFEDMARLNILEADDY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  LI  +   G AY A+ ++ F      +YG  S RK+++ K G      
Sbjct: 113 PRATHTLDGIQRLIAELEDKGFAYAADGDVYFSVRRFQDYGKLSGRKLEDLKAGASGRVE 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K +P DF LWK + P EP W+SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 SAEESLKHDPFDFALWKAAKPEEPAWDSPWGPGRPGWHIECSAMVRDRLGDSIDIHVGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS         A  W+HNG +N+ G KMSKS GNF TI +LL+     
Sbjct: 233 DLVFPHHENEIAQSEAVTG-HPLARYWLHNGMVNVGGEKMSKSLGNFTTIRQLLDEGGI- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQTST 342
                  V+RL +L  +YR+PIDFT + L   +                     W ++ T
Sbjct: 291 ----SPMVLRLFVLQANYRKPIDFTDEALQACQNGWETLQEGLHFGEHWGDRLGWTESVT 346

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIF 385
               +      A+ +DLNT +A+  L +LA+E  +  +LL                    
Sbjct: 347 VDPDLSDRFRMAMDDDLNTPAALAVLFELAKELRRQQNLLIHEGHLDGDAQQLHQHWVTL 406

Query: 386 NASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
              A +LG+E   E    N+    AIE  + +R    + K F+ AD IR  L   G  L 
Sbjct: 407 VQLAGVLGLEAEPELAETNELDEAAIEDWIAKRHAARQAKDFAEADRIRHYLADLGITLI 466

Query: 444 DYKNPDNGQRMTRWKQ 459
           D         +TRW +
Sbjct: 467 DQAGG-----ITRWSR 477


>gi|299541906|ref|ZP_07052229.1| cysteinyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298725644|gb|EFI66285.1| cysteinyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 466

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/489 (34%), Positives = 249/489 (50%), Gaps = 56/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+N+L R+   F  ++   ++MYVCGPTVY++ HIGN+RP+IV+D + R  +Y   
Sbjct: 1   MGIQIFNSLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDKII+ A +      + + +  +T +    + +D T L C      
Sbjct: 61  D--VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+  +I  IQ +I  G+AYE+  ++ + T     YG  S + +D+ K+G R+   
Sbjct: 113 PRVTEHMDDIIQFIQVLIEKGYAYESAGDVYYRTRKFDGYGKLSHQSVDDLKIGARIEAG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +  DF LWK + P E  W+SPWG GRPGWHIECS M+  +LG   DIH GG DL F
Sbjct: 173 EKKDDALDFALWKAAKPGEIFWQSPWGDGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNG++N++  KMSKS GNFI +N++        +  
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDIR-------KQI 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
              ++R  ML  HYR PI+F    +  A   L +      +                   
Sbjct: 285 DPQILRFFMLSVHYRHPINFAKDLVEAAASGLERIRTAYNNVKHRLTTTVSLGDHSEEWL 344

Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
                       A+ +D NT +AI  L ++AR +                 +  F     
Sbjct: 345 NKITEQKAHFEEAMDDDFNTANAISVLFEVARIANIYLSEANTCKKVLETFIETFEVLGD 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGIE  KE    +  I      QER+   K + F+ +D IR  L+++G ILED +    
Sbjct: 405 VLGIEFAKEEELLDEEIEALL--QERVEARKNRDFARSDEIRDHLQAQGIILEDTR---- 458

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 459 --QGTRWKR 465


>gi|57233567|ref|YP_180814.1| cysteinyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|109894896|sp|Q3ZAD5|SYC_DEHE1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57224015|gb|AAW39072.1| cysteinyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 458

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/477 (36%), Positives = 241/477 (50%), Gaps = 42/477 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF  ++   ++MYVCG T     HIG+A   I FDV+ R L Y     
Sbjct: 1   MKIYNTLSGKLEEFVPLEDGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLSYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII +A  +          S +  +N   F+     L      + PR
Sbjct: 59  RVKYIQNFTDIDDKIIAKANAQ------GIEPSTLAERNIGVFLDAMAALNITPADYYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +P++I ++  +I  G+AYEA   +      +  YG  S R +++   G R+     
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYEAGGSVYLRVQKVEGYGKLSHRTLEQMMAGARIEPGEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------DPAVL 352
             +R+ +L + YR P+ ++ + L  AE    +  QT+  +                    
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARQDNPRLQEINVDVKTYRERFT 345

Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIEV--CKEHLNK 403
             + ND NT +A+  +  L RE         K+     +F   A ILG+ +   +   + 
Sbjct: 346 QYMDNDFNTSAALATIFDLGRELNRIEAEGGKSTQGQELFKELAGILGLSLIIAEPTTSA 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           + +  I+ L++ R  L   K++  AD IR  L++ G +LED          T WK K
Sbjct: 406 DAAPFIDMLIELRKDLRLAKQYQLADKIRTSLDAAGILLEDS------AGGTIWKIK 456


>gi|315274656|ref|ZP_07869496.1| cysteinyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313615713|gb|EFR89001.1| cysteinyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 471

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 252/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQMINTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG+  DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGETIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|237741373|ref|ZP_04571854.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294784133|ref|ZP_06749434.1| cysteine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|229430905|gb|EEO41117.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|294488203|gb|EFG35548.1| cysteine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 473

 Score =  554 bits (1428), Expect = e-155,   Method: Composition-based stats.
 Identities = 180/492 (36%), Positives = 272/492 (55%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L       + +
Sbjct: 234 PHHENERAQSKCGCGG-TFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KYF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P++F+   L + +  L +   T                      
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
            +K  I+   + A+  D NT  A+  + +L +   K  D + I                 
Sbjct: 346 ATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLVM 405

Query: 390 ---HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 MIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|311280587|ref|YP_003942818.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308749782|gb|ADO49534.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 461

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 179/482 (37%), Positives = 257/482 (53%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT+ R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        +    +  +   +  KD   L  L P ++PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GEDFVGLVDRMIIEMHKDFDALNILRPDNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I + + +I  GHAY A+  +++F   S P YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIPEIIEITERLIERGHAYVADNGDVMFSVPSDPTYGELSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKAGEPAWASPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNTWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +                    +     A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDASAAAAGGEAFEARFREA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCK-------- 398
           + +D NT  A   L  +ARE  +           +       + +LG+            
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKGEDAQAASAMAAHLRKLSGVLGLLEQDPETFLQGG 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L+Q+RL   K K +++AD  R +L   G +LED      G + T W+
Sbjct: 406 AQADDSEVAEIESLIQQRLDARKAKDWAAADAARDRLNEMGIVLED------GPQGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|194289323|ref|YP_002005230.1| cysteinyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|229558628|sp|B3R4D1|SYC_CUPTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|193223158|emb|CAQ69163.1| cysteine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 462

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 181/481 (37%), Positives = 254/481 (52%), Gaps = 45/481 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    
Sbjct: 2   QPLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYV+NITDIDDKII RA      +   + I  +T++  Q   +D   L  + P H+
Sbjct: 62  E--VTYVQNITDIDDKIIRRA------VENGETIGELTTRFIQYMHEDAAALGVIRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+++PQM+ +I  +   G AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATDYVPQMLDMIGKLEAKGLAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVSA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W+S WG GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCALLGEHFDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N+W+HNGF+ +   KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEGASG-KPFVNLWMHNGFVRINDEKMSKSLGNFFTIREVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
            +++ A V+R  +L  HYR P++++   L +A   L++                      
Sbjct: 287 -KAYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCAVDWDEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEH------ 400
                A+ +D NT  A+  L  LA E  +             A  LG+     H      
Sbjct: 346 KRFAEAMGDDFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQGG 405

Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +      IEKL+  R      + F+ AD IR QL   G +LED          T W+
Sbjct: 406 KSADGPSPDEIEKLIAARKAAKAERNFAEADRIRAQLLEAGIVLEDKPGGA-----TEWR 460

Query: 459 Q 459
           +
Sbjct: 461 R 461


>gi|332685571|ref|YP_004455345.1| cysteinyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369580|dbj|BAK20536.1| cysteinyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 469

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 177/492 (35%), Positives = 247/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL RK   F  I+ + +RMYVCGPTVY++ HIGNAR  I FD + R L Y     
Sbjct: 2   ITIYNTLTRKKEPFIPIEENKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TDIDDKII  A++      +      ++S+    F +D+  L     T  PR
Sbjct: 60  TVNYVSNFTDIDDKIIRAAKE------MKITAEAVSSRFIHAFEEDSNALNIQPATCHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
              HIP ++  IQ +I  G+AYEA  ++ + T     YG  S + ID+ ++G       E
Sbjct: 114 VMTHIPDILAFIQQLIEKGYAYEAQGDVYYRTYKFKQYGELSHQSIDDLEIGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK++ P E  W+SPWG GRPGWHIECS M+  +LG+  DIHGGG DL 
Sbjct: 174 RSLKEDPLDFALWKKAKPGEISWDSPWGAGRPGWHIECSVMAMKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +   N W+HNG++ +     KMSKS GNF+T++EL++T     
Sbjct: 234 FPHHENEIAQSEAQSG-KTFVNYWMHNGYVTVGENDEKMSKSLGNFVTVHELIQT----- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
                 V+R  M  T YR PI ++   + EA   L +                       
Sbjct: 288 --IDPQVLRFFMSTTQYRHPIHYSQTTIKEAASNLKRLQNAFNNLTFRKNDTLEQLTEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
               +  +     + A+ +D NT + I  +++LA+      +   +           F  
Sbjct: 346 NDLETLNLFKGQFIQAMDDDFNTANGITIVYELAKWMNLYSERKAVSKKVIEKTLTYFTQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   I   I++L+ ER    K   F  +D IR  L  +G +LED K 
Sbjct: 406 WLAIFGIFFSSEVL---IDQDIDQLINEREQARKEGNFGRSDEIRDLLNQQGIVLEDTK- 461

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 462 -----QGTRWRR 468


>gi|229824608|ref|ZP_04450677.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
 gi|229785979|gb|EEP22093.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
          Length = 480

 Score =  554 bits (1427), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+   F+ I    +  YVCGPTVY++ HIGNAR  + FD + R  +Y   + 
Sbjct: 9   IQVYNTLTRQKEVFRPIKEGQVAFYVCGPTVYNYIHIGNARSAVAFDTIRRYFQYRGYQ- 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A  E            I  K    F +DT +L   A T  PR
Sbjct: 68  -VNYVSNFTDVDDKIIKAAIAE------GSTPEAIADKYIAAFKEDTGQLNIQAATVHPR 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
              +I ++I  +Q +I  G+AYE+  ++ F T S  +YG  S + +++  +G        
Sbjct: 121 VMENIEEIIAFVQTLIEKGYAYESEGDVYFKTESFKDYGHLSDQSLEDLLVGASERLDQA 180

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K NP DF LWK + P E  W+SPWG GRPGWHIECS M++ YLG   DIHGGG DL
Sbjct: 181 VAERKANPLDFALWKTAKPGEIAWDSPWGPGRPGWHIECSVMATKYLGDTIDIHGGGQDL 240

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS         A+ W+HNGF+ +  +  KMSKS GNF+ + +LL      
Sbjct: 241 TFPHHENEIAQSEACTG-HTFAHYWLHNGFVTIGKQDEKMSKSLGNFVLLRDLLA----- 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
             ++   VIR  +  THYR P+ +    +TEA+  ++K  +                   
Sbjct: 295 --AYDPMVIRYMLATTHYRRPLRYDEAVITEAQANVNKLREAIRRLKHRQEQASADLEGH 352

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
                    I    ++A+ +D N  + I AL  L +   +  DL             + +
Sbjct: 353 ETWLAEINGIQEQFVTAMDDDFNASNGITALFDLVKSLNRYLDLELVSQVVLSLYDKVLH 412

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               + G+++  E  + +I   IE L++ER      K F+ +D IR QL+ +G +L+D  
Sbjct: 413 DLLAVFGLDL--EDKSNSIDQEIEALIEERRQARANKDFARSDAIRDQLKEQGILLDDT- 469

Query: 447 NPDNGQRMTRWKQ 459
                 + T WK+
Sbjct: 470 -----PQGTVWKR 477


>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 473

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 193/488 (39%), Positives = 274/488 (56%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    E  V
Sbjct: 6   LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWE--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII+RA +        + I  +T +  Q   +D  RL CLAP   PRAT
Sbjct: 64  KYVRNITDIDDKIIKRANEN------GETIQALTDRFIQAMNEDAHRLGCLAPDEAPRAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I  ++ +G AY A N ++ F       YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 DKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEAATG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------KGIID-------PA 350
             VIR  ++ +HYR P++F+   L EA+  L+++     +      + + D         
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYQQQFNEELTDHFSQIHLER 349

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIF----NASAHILGI------E 395
             +A+ +D NT  A+  L +LA+E  +     N +   +F        +ILG+      +
Sbjct: 350 FNAAMCDDFNTAEAMAVLFELAKELNRALKEENAEQAKVFYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             +  + +         IE+L+Q+R+   K K F+ AD IR+ L ++G +LED +     
Sbjct: 410 FLRSDIGQEALGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTLWRR 471


>gi|269122241|ref|YP_003310418.1| cysteinyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616119|gb|ACZ10487.1| cysteinyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 465

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 183/477 (38%), Positives = 259/477 (54%), Gaps = 46/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K YNTL  +  EF+ I+P  ++MYVCGPTVY++ HIGNARP++VFD+L R  R+     
Sbjct: 1   MKFYNTLTNQTEEFKPIEPGKVKMYVCGPTVYNYIHIGNARPIVVFDILARYFRHKNY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDK+I +A +E         +  I  +  + F++DT +L   A   +P+
Sbjct: 59  VVEYVQNFTDIDDKMINKANEE------GKTVREIADRYIEAFLEDTKKLNISADIIRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI  I+ +I  G+AYE N +++FD +    YG  S +K D+ + G R+    +
Sbjct: 113 ATEYIEDMIITIEALIDKGYAYELNGDVLFDVTKYSEYGKLSNQKTDQLEAGARIEVGEN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK     EP W++PWG GRPGWHIEC+AMS  Y G  FDIHGGG DLIFPH
Sbjct: 173 KRNPQDFVLWKNKKKGEPFWKAPWGEGRPGWHIECTAMSHKYFGLNFDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+ CA      AN W+HNG++ L+G KMSKS GNF  + ++LE        +  
Sbjct: 233 HENEIAQARCAYGGN-FANYWLHNGYIQLDGEKMSKSKGNFFLLRDVLE-------EFDG 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------STSKG 345
            V R  +  THYR+PI+F+ + +  A+  L K                         S  
Sbjct: 285 NVFRWFLAGTHYRKPINFSKEDMLAAKAALEKINGALLRAKDFIIENNTKYDNILEGSIK 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI 394
                   A+ +DLNT  A+  +H+  RE  K  D           +  I +  A++LGI
Sbjct: 345 EFSEKFDQAMEDDLNTPLAVSLIHEFLREINKFIDNYGKSVIIKEAVAVINDRMANVLGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           E+ +  L    S  ++  +  R      K F  +D IR +L   G  L+D K+    
Sbjct: 405 ELKESGLEDLSSSLLDLFIYIRKEARSEKNFKLSDLIRDKLSELGIELKDNKDGTTS 461


>gi|315640330|ref|ZP_07895447.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315483992|gb|EFU74471.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 468

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/493 (35%), Positives = 253/493 (51%), Gaps = 63/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL RK   FQ I+   ++MYVCGPTVY++ HIGN R  + FD + R   Y   + 
Sbjct: 2   IQIYNTLTRKKEVFQPIEEGKVKMYVCGPTVYNYIHIGNGRSTVSFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A++       N+    + ++    F +DT  L        PR
Sbjct: 61  -VTYVSNFTDVDDKIIHAAKE------ANETALEVANRFIAAFYEDTEALHVKKADINPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +HIP +I  I  +I  G+AYEA  ++ + T     YG  S + IDE ++G       E
Sbjct: 114 VMDHIPDIIDFISVLINKGYAYEAQGDVYYRTRKFTKYGQLSDQSIDELEIGASQRTGQE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W SPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQIKEDPLDFALWKAAKADEISWSSPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +  AN W+HNG++ +  + +KMSKS GNF+T++EL+       
Sbjct: 234 FPHHENEIAQSEANTG-KPFANYWMHNGYVTIGEDDQKMSKSLGNFVTVHELV------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------ 341
           +     V+R  +  T YR PI ++   L EA   L +   T                   
Sbjct: 286 KEVDPKVLRFFLATTQYRRPIRYSQTTLKEAATNLQRLKNTVDNVVFRQEKAVAQLASDA 345

Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
              T    ++   ++ + +D N  + I   ++LA+      +            L    +
Sbjct: 346 DKLTDLAKLEEQFITEMDDDFNAANGITVTYELAKWLNIYLEQSDVSQAVLAQGLSQLTS 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GIE      N+ +   IE+L+++R    K + F+ +D IR QL+ +G +LED   
Sbjct: 406 WLEIFGIEF----TNELVDADIEQLIEQRNQARKDRDFARSDEIRDQLKEQGIVLEDT-- 459

Query: 448 PDNGQRMTRWKQK 460
                + TRW+++
Sbjct: 460 ----AQGTRWRRE 468


>gi|257058375|ref|YP_003136263.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256588541|gb|ACU99427.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 484

 Score =  553 bits (1426), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/504 (33%), Positives = 257/504 (50%), Gaps = 68/504 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+    + ++   IRMY CG TVYD+ H+G+AR  +V+DV+ R L++   
Sbjct: 1   MTLTVYNTLTRRKEPLETLETGKIRMYCCGITVYDYCHLGHARTCMVWDVVRRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y++N TDIDDKI+ RARQE         +  ++ +  + + +D  RL        
Sbjct: 61  E--VQYIQNFTDIDDKILNRARQE------GTTMEAVSDRFIEAYFEDMERLHVQKADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----- 177
           PRAT+ +  +  L+  +   G+AY++N ++ +      +YG  S RK+++ + G      
Sbjct: 113 PRATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRKLEDLQAGASGRVE 172

Query: 178 -RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            + PE   KK+P DF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 VQDPEAAKKKDPFDFAVWKAAKPGEPSWDSPWGQGRPGWHIECSAMVRERLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A  W+HNG + +EG KMSKS GNFITI +LL+   
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVEGEKMSKSLGNFITIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
                     +RL +L  HYR+P+DFT + L  A        +                 
Sbjct: 289 ----KVDPMAMRLFILQAHYRKPVDFTDEALEAATNGWHTLKEGLLFGYNHGKQLNFTAS 344

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
                +   +      A+ +D N    +  L ++A+E  K  ++L               
Sbjct: 345 PPHPLTSSPLTQRFQQAVDDDFNFAGGLAILFEIAKELRKEGNILVHQGHTETSPQVLEE 404

Query: 383 --PIFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   A +LG+     EV +E  N      IE+L+++R I  + K ++  D +R +L
Sbjct: 405 QWRTLVELAGVLGLETDISEVQEEVGNGLSDAEIEELIEQRKIARQNKNYAEGDRLRDEL 464

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           +++G IL D         +T W +
Sbjct: 465 KNQGIILVDQPGG-----ITTWHR 483


>gi|158423408|ref|YP_001524700.1| cysteinyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172047950|sp|A8I4X6|SYC_AZOC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|158330297|dbj|BAF87782.1| cysteinyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 462

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 217/475 (45%), Positives = 284/475 (59%), Gaps = 34/475 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R    F+ +DP+ +R+YVCGPTVYD AHIGNARP+IVFDVL+RLLR  YG
Sbjct: 1   MELRLYNTLTRSKDAFRPLDPNLVRLYVCGPTVYDHAHIGNARPVIVFDVLFRLLRRLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YVRNITD+DDKI  RA +         +I  +T +    F  DT  L CL P  +
Sbjct: 61  ADHVRYVRNITDVDDKINARAAERS------ISIRELTEETYAWFRDDTAALGCLRPDVE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M  LI+ ++  GHAY A   ++F   S+P YG  SRR +DE   G RV   
Sbjct: 115 PRATEHILEMQALIERLVASGHAYVAEEHVLFHVPSMPEYGKLSRRPLDEMLNGARVDVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF+LWK ST  +PGW SP G    GRPGWHIECSAMS  +LG+ FDIHGGG+D
Sbjct: 175 PFKRDPMDFVLWKPSTEGQPGWPSPCGIATPGRPGWHIECSAMSWRHLGETFDIHGGGID 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQS CA      A +W+HNGFL +EG KMSKS GNF+TI ELL       
Sbjct: 235 LVFPHHENEIAQSRCAFDSGSMAQVWMHNGFLLVEGEKMSKSLGNFVTIRELLTD----- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPAVL 352
             WP  V+RLAML THYR+PI++T Q +  A   L KW +        +      +  + 
Sbjct: 290 --WPGEVLRLAMLSTHYRQPINWTRQGIGFAAKTLDKWYRVIGDVEAETGEGNPFESEIA 347

Query: 353 SALYNDLNTVSAIQALHKLARES---TKNHDLLPIFNASAHILGIEVCKE--------HL 401
             L +DLN+ SAI  LH LA  +     +  L   F ++A+++G+    E          
Sbjct: 348 DRLGDDLNSPSAITHLHHLADVAEHEDASSALKRRFKSAANLMGLLHETETEWRARQRAA 407

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                 AI  L+ +R    K + F++AD+IR+QL S+G +L D K+      +TR
Sbjct: 408 VSVDPDAIAALIADRNAARKARDFATADHIREQLASQGIVLMDNKDGTTSWELTR 462


>gi|147668707|ref|YP_001213525.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|187629809|sp|A5FP90|SYC_DEHSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146269655|gb|ABQ16647.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 457

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 176/477 (36%), Positives = 242/477 (50%), Gaps = 42/477 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF  ++   ++MYVCG T     HIG+A   I FDV+ R L Y     
Sbjct: 1   MKIYNTLSGKLEEFVPLENDKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII +A  +          S +  +N   F+     L      + PR
Sbjct: 59  RVKYIQNFTDIDDKIIAKANAQ------GIEPSTLAERNIGVFLDAMAALNITPADYYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +P++I ++  +I  G+AY  +  +      +  YG  S R +++   G RV     
Sbjct: 113 ATQEVPKIIEIVSGLIDKGYAYAVDGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C   ++     W+HNG L L   KMSKS GN +TI E L         + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------PAVL 352
             +R+ +L + YR P+ ++ + L  AE    +  QT+  K                    
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETTVDTKAYRERFT 345

Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIE--VCKEHLNK 403
             + ND NT +A+  +  L+RE         K+ D   +F   A ILG+   V +     
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKTGT 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +++  IE L++ R  L   K++  AD IR  L++ G +LED          T WK K
Sbjct: 406 DVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLEDS------AGGTVWKVK 456


>gi|46906472|ref|YP_012861.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47094540|ref|ZP_00232204.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47097639|ref|ZP_00235159.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|217965673|ref|YP_002351351.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|226222868|ref|YP_002756975.1| cysteinyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825717|ref|ZP_05230718.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853494|ref|ZP_05242842.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254900580|ref|ZP_05260504.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913469|ref|ZP_05263481.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254932458|ref|ZP_05265817.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254937950|ref|ZP_05269647.1| cysteinyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|254991761|ref|ZP_05273951.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255520317|ref|ZP_05387554.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|290892620|ref|ZP_06555613.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|300764636|ref|ZP_07074628.1| hypothetical protein LMHG_11118 [Listeria monocytogenes FSL N1-017]
 gi|61216246|sp|Q724H3|SYC_LISMF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781684|sp|B8DF15|SYC_LISMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|259511837|sp|C1KYH2|SYC_LISMC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46879736|gb|AAT03038.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47013983|gb|EAL04996.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|47017086|gb|EAL07955.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|217334943|gb|ACK40737.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|225875330|emb|CAS04027.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258606866|gb|EEW19474.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|258610559|gb|EEW23167.1| cysteinyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|290557929|gb|EFD91450.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|293584014|gb|EFF96046.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293591477|gb|EFF99811.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|293594961|gb|EFG02722.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514743|gb|EFK41798.1| hypothetical protein LMHG_11118 [Listeria monocytogenes FSL N1-017]
 gi|307569778|emb|CAR82957.1| cysS [Listeria monocytogenes L99]
 gi|328467850|gb|EGF38890.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|332310650|gb|EGJ23745.1| Cysteinyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 471

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/487 (35%), Positives = 251/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|227529487|ref|ZP_03959536.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350572|gb|EEJ40863.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 472

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 172/491 (35%), Positives = 257/491 (52%), Gaps = 59/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+   P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LTIYNTLTRKQEEFKPQTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K  Q F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAHEQ------GITVPQLADKYIQAFMEDTKAINIEPATMHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +IP++I  IQ +I  G+AYE + ++ +      +YG  S + ID+ ++G        
Sbjct: 114 ATENIPEIIKFIQGLIDKGYAYEKDGDVYYRARKFKDYGQLSGQSIDDLEVGASEHVSDD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIHGGG DL
Sbjct: 174 EINKKEDPMDFALWKAAKPGEINWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +     W+HNGF+ +  +  KMSKS  NFIT+++++      
Sbjct: 234 EFPHHENEIAQSEAKTGQK-FVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDP- 349
            +     V+R  M  T YR PI ++   L +A+  L            +   ++   DP 
Sbjct: 287 -KQVDPQVLRFFMATTQYRRPIQYSEDNLIDAKNNLEHIQTAFDNLTYRQKDAQDGADPV 345

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
                     +   A+ ND+N  + I  +++L + +               ++  + +  
Sbjct: 346 VTQKLADFKQSFTEAMDNDINVQNGITVVYELVKFANVYAQQKAVKAAALTEMKDLISEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+++     N+     I+ L+ ER    K K F+ +D IR +L+++G ILED    
Sbjct: 406 VSIFGVKLAS-SDNELNDEHIQALIDERNEARKNKDFARSDQIRDELKAQGIILEDT--- 461

Query: 449 DNGQRMTRWKQ 459
               + TR+K+
Sbjct: 462 ---PQGTRFKR 469


>gi|325686898|gb|EGD28923.1| cysteine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 450

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 170/469 (36%), Positives = 246/469 (52%), Gaps = 36/469 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E            +  K    F +D T L   + T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKKE------GITPKEVADKYIAAFHEDVTALGVKSAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PR  + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 QHPRVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA----- 350
                   V+R      HYR+PI+FT + + +A   L     T      G  D A     
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYDQPFTGQADSAQFQAF 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKN 404
                +A+  D N  + I  + +LA+         ++         + GI   +E L+ +
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAALAELLEVFGIVFVEEVLDAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               IE+L++ER +    + F++AD IR +L ++G  L D K+     R
Sbjct: 405 ----IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 449


>gi|116871622|ref|YP_848403.1| cysteinyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123460673|sp|A0AF38|SYC_LISW6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116740500|emb|CAK19620.1| cysteinyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 471

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLTREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPDEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|257418802|ref|ZP_05595796.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257160630|gb|EEU90590.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 470

 Score =  553 bits (1425), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEACKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|325697466|gb|EGD39352.1| cysteine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 450

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 170/469 (36%), Positives = 246/469 (52%), Gaps = 36/469 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E            +  K    F +D + L     T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PR  + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 QHPRVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA----- 350
                   V+R      HYR+PI+FT + + +A   L     T      G  D A     
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVF 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKN 404
                +A+  D N  + I  + +LA+         D+   F     + GI   +E L+ +
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTADIKAAFAELLEVFGIVFVEEVLDAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               IE+L++ER +    + F++AD IR +L ++G  L D K+     R
Sbjct: 405 ----IERLIEERQVARGNRDFATADRIRDELAAQGIKLLDTKDGVRWTR 449


>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 479

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 182/484 (37%), Positives = 258/484 (53%), Gaps = 55/484 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL  K  EFQ +   N+++YVCG TVYD  HIG+AR   VFDV+ R L +     
Sbjct: 2   LKVFNTLSNKKEEFQPLQKDNVKIYVCGVTVYDLCHIGHARSSGVFDVIRRYLMFKGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII+R+ ++            + +    +   D   L  L P H P+
Sbjct: 61  -VTFVKNFTDIDDKIIKRSNEKQMDW------RELAANFIAEHDADMDSLNILRPDHTPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I QMI + + +I  G AYE+N +I +       YG  S RK+++   G R+     
Sbjct: 114 ATDYIKQMIQMCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSVK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S P EP WESPWG+GRPGWHIECS MS   LG  FDIHGGG DL+FPH
Sbjct: 174 KENPYDFVLWKASKPGEPSWESPWGQGRPGWHIECSVMSEDLLGLPFDIHGGGKDLVFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A      +  WIHNGF+N+   KMSKS GNF TI ++L       + + A
Sbjct: 234 HENEIAQSEAACGCM-FSKYWIHNGFVNVNQEKMSKSLGNFFTIRDVL-------KEFDA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTSK 344
            ++R  ++ THYR  +DF+   L EAE  L++                      +    K
Sbjct: 286 EIVRYFLMTTHYRSALDFSQDHLLEAEKSLNRIYTMLDEISRFNAGKKGVDITKEAEKMK 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK--------------NHDLLPIFNASAH 390
                   +A+ +D NT  A+ A+ ++ RE+ +                 +  +F     
Sbjct: 346 ETFMDKFQTAMDDDFNTPEALAAMFEVIRETNRLLGSKPNKISFPALQEAVQDVFKVILD 405

Query: 391 ILGIE--VCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +LGI     ++    N+SI+ E+L   +Q+R    K K F  AD IR++L+ +G  L D 
Sbjct: 406 VLGIVKYTPEKWFRINLSISEEELRQKIQDRADAKKDKNFELADSIRQELKQQGIELLDT 465

Query: 446 KNPD 449
            +  
Sbjct: 466 IDGT 469


>gi|119510000|ref|ZP_01629141.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119465324|gb|EAW46220.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 477

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/498 (34%), Positives = 247/498 (49%), Gaps = 62/498 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++P  ++MY CG TVYD+ H+G+AR  IV+DV+ R L++   
Sbjct: 1   MTLTLYNTLTRRQEAFATVEPGKVKMYYCGVTVYDYCHLGHARACIVWDVVRRYLQFIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y++N TDIDDKI++R+R+EH       ++  +  +    + +D  RL        
Sbjct: 61  E--VRYIQNFTDIDDKILKRSREEH------SSMEAVAERYINAYFEDMGRLGIKPADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
           PRAT+ +  +  LI  +   G AY A+ ++ +       YG  S RK+++ + G      
Sbjct: 113 PRATHTMNGIQRLIHELENKGFAYPADGDVYYAVRQFNEYGKLSGRKLEDMQAGASERVQ 172

Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE   KK+P DF LWK + P EP WES WG GRPGWHIECSAM    LG   DIH G
Sbjct: 173 VEDPEYQKKKDPFDFALWKAAKPGEPAWESSWGAGRPGWHIECSAMVRDRLGDTIDIHAG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNF TI +LL+   
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLATYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------ST 342
              R      +RL +LM  YR+PIDFT   +  A        +                 
Sbjct: 289 ---RGVEPMAVRLFVLMAQYRKPIDFTDDAIAAATNGWHTLKEGLLFGYEYGGVGSGEKL 345

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIF 385
           +  I       A+ +D N    +  L +LA+E  +  +++                    
Sbjct: 346 TSEIHIQRFQEAVNDDFNFPGGLAVLFELAKELRRQGNIIVHQGKTETSPEELQKQWQTL 405

Query: 386 NASAHILGIEVCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              A + G+    E  N  I       IE L+Q+R    K K F+ +D IR QL+++G  
Sbjct: 406 VILAEVFGLVAQPEAENAIIEGLSDAEIENLIQQRQAARKSKNFAESDRIRDQLQAEGIT 465

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           L D ++       TRW +
Sbjct: 466 LIDSRD------GTRWHR 477


>gi|148381443|ref|YP_001255984.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153933894|ref|YP_001385818.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153937063|ref|YP_001389225.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|187629799|sp|A7FZ91|SYC_CLOB1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629801|sp|A5I7M8|SYC_CLOBH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148290927|emb|CAL85063.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152929938|gb|ABS35438.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152932977|gb|ABS38476.1| cysteine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 465

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 175/488 (35%), Positives = 256/488 (52%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  EF  + P  ++MYVCGPTVY+F HIGNAR  +VFD + R L Y   + 
Sbjct: 1   MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TDIDDK+I+RA +E         +  +  +  +++ KD   L     T  PR
Sbjct: 60  -VKFIQNFTDIDDKMIKRANEE------GSTVKELGDRFIKEYYKDADDLNIERATKNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  + ++I  + ++I  G+AYE + ++ F T    +YG  S + ++E ++G R+     
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF +WK   P EP WESPWG GRPGWHIECS M+ + LG+  DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A  W+H+ F+N+  +KMSKS  NF T  E+LE        + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------- 351
            V+R+ ML  HYR  I+F+++ L   +  L +   +  +   +   V             
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344

Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
                     +  + +D NT  AI  +  L R+   N  +          L +       
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISIIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI   +E    ++   IEKL++ER    K K ++ AD IR  L+ +G +LED       
Sbjct: 405 LGI--LQESTKASLEEEIEKLIEERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456

Query: 452 QRMTRWKQ 459
            +  RWKQ
Sbjct: 457 PQGIRWKQ 464


>gi|256761895|ref|ZP_05502475.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256683146|gb|EEU22841.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 470

 Score =  552 bits (1424), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAVANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|256855023|ref|ZP_05560384.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256709536|gb|EEU24583.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
          Length = 470

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 249/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L       ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEELG---DAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|154248635|ref|YP_001419593.1| cysteinyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|229558802|sp|A7IPJ0|SYC_XANP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154162720|gb|ABS69936.1| cysteinyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 462

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 218/475 (45%), Positives = 283/475 (59%), Gaps = 34/475 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R     + +DP+N+RMYVCGPTVYD AHIGNARP+IVFDVL+RLLR  YG
Sbjct: 1   MELRLYNTLTRSKDTLRPLDPANVRMYVCGPTVYDHAHIGNARPVIVFDVLFRLLRRLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKI  RA +          I  +T +  + F +DT  L CL PT +
Sbjct: 61  EGHVKYVRNITDVDDKINARAAER------GITIRDLTEETYRWFREDTAALNCLRPTVE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M  LI++++  GHAY A   ++F   S+P+YG  SRR +DE   G RV   
Sbjct: 115 PRATEHIAEMRTLIESLVASGHAYVAEEHVLFHVPSMPDYGRLSRRPLDEMVAGARVDVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +K++P DF+LWK S    PGW SP G    GRPGWHIECSAMS  +LG+ FDIHGGG+D
Sbjct: 175 PYKRDPMDFVLWKPSEAGIPGWPSPCGIATPGRPGWHIECSAMSWRHLGETFDIHGGGID 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQS CA      A +W+HNGFL LEG KMSKS GNF+TI ELL       
Sbjct: 235 LVFPHHENEIAQSRCAFHTGVMAQMWMHNGFLMLEGEKMSKSLGNFVTIRELLA------ 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------IDPAVL 352
             WP  V+RLAML THYR+PI++T Q L  A   L KW +               +  + 
Sbjct: 289 -EWPGEVLRLAMLSTHYRQPINWTRQGLGFAAKTLDKWYRIIGEAEAETGEGNPFETEIA 347

Query: 353 SALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASAHILGI--------EVCKEHL 401
             L +DLNT S I  LH   ++A     +  L   F  +A++LG+           ++  
Sbjct: 348 DRLADDLNTPSVITHLHHLAEVAEHEEASSALRRRFKGAANLLGLLGDTETGWRARQKEA 407

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                  I  L+ +RL   K K F  AD IR++L ++G +L D K+      ++R
Sbjct: 408 IALDEGVIAGLIADRLAARKAKDFKRADQIREELAAQGVVLMDNKDGTTSWEVSR 462


>gi|325567615|ref|ZP_08144282.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325159048|gb|EGC71194.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 470

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 170/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   FQ ++   ++MYVCGPTVY++ HIGN R  + FD + R   Y     
Sbjct: 2   IKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++      +      +  +    F +DT  L     T  PR
Sbjct: 60  TVDYLMNFTDVDDKIIRAAKE------LGTTAPEVAERFINAFNEDTAALNVKPATMNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +HI  +I  I  ++  G+AY  N ++ + T    +YG  S + IDE ++G       E
Sbjct: 114 VMDHIEDIIAFIAALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  WESPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +  AN W+HNG++ +  +  KMSKS GNF+T++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
           +     V+R  +  T YR PI ++   L EA+  L K   T  +                
Sbjct: 286 KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDEE 345

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
                    +   +  + +D N  + I  +++LA+      +            L  F+ 
Sbjct: 346 VNAPVLEEFEERFIKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLTAGLAKFSE 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L+ ER+   K K F+ +D IR +L+ +G ILED   
Sbjct: 406 WLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILEDT-- 460

Query: 448 PDNGQRMTRWKQK 460
                + TRW+++
Sbjct: 461 ----PQGTRWRRE 469


>gi|322517683|ref|ZP_08070546.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322123671|gb|EFX95263.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 447

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 165/468 (35%), Positives = 247/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MY+CGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLTENVVNMYICGPTVYNYIHIGNARSAVAFDTIRRYFEYCGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +         +   ++ K    F++DT +L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAANE------AGISTKELSDKFITAFMEDTAQLGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             N++ ++I  +  +I  G AY A  ++ F  +   NY   + + +++ ++G       E
Sbjct: 114 VINYMDEIIAFVSTLIDKGFAYVAEGDVYFQVAKSKNYAKLANKTLEDLEIGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGNTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R  +    YR+PI+FT + + +AE+ L     T                   A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + +  L  +A+       +  +   F     + GI   +E L+++    
Sbjct: 346 QVAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKMLQVFGIVFEEEVLDED---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IEKL++ER      K F++AD IR +L ++G  L D +    G R TR
Sbjct: 402 IEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTR---EGVRWTR 446


>gi|303256926|ref|ZP_07342940.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860417|gb|EFL83494.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 464

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 189/475 (39%), Positives = 262/475 (55%), Gaps = 34/475 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R +  F++I P  + MYVCG TVYD  HIG+ R  I FDV  R L+    + 
Sbjct: 3   LKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TD+DDKII+RA +           S +    T++  +D   L CL P+ +PR
Sbjct: 62  -VKFVRNVTDVDDKIIKRAAERKIL------PSELAETYTKRMQEDLGELGCLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IP+M+ LI+ +   G+AY+  N ++ F       YG+ S +K+DE + G RV  + 
Sbjct: 115 ATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSGKKVDELQPGERVRVEE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWKR+ P EP W+S WG+GRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 175 AKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDLMFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-ETKKFGGRSW 302
           HHENEIAQS  A+  +K  N W+H+G L + G KMSKS GNF TI + L ET    G   
Sbjct: 235 HHENEIAQSEAANG-KKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGDKN 293

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
               +R  +L +HYR PIDF+   + +A   L +      +    D              
Sbjct: 294 GNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADDNPLDWNEKYAAQFK 353

Query: 353 SALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIE------VCKEHLNKN 404
            A+ +D NT  A+  L +LA+E    K+ +L         +LGI         K  ++  
Sbjct: 354 EAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLAPEAFVKGAVDSV 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              A+E L+ ER      K ++ AD IRK+L  K  +LED         +T W++
Sbjct: 414 DEAAVEALIAERKAAKAAKNWARADEIRKELLEKNIVLEDAPGG-----VTTWRR 463


>gi|315649724|ref|ZP_07902808.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315274912|gb|EFU38288.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 468

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/490 (34%), Positives = 247/490 (50%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F A +   +++YVCGPTVYD+ HIGNARPMI FDV+           
Sbjct: 3   LQIYNTLTRMKETFVAQESGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQG--N 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V+YV N TD+DDK+I +A Q          +  +  K  Q + +D   L     T  PR
Sbjct: 61  DVSYVVNFTDVDDKMIRKAEQ------TGTTVPEVADKFIQAYYEDLDGLGIPRATLNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+++  +I  IQ ++    AYE   ++ + T    +YG  S++ +DE + G R+     
Sbjct: 115 VTDNMENIIEFIQELVDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVDKR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL FPH
Sbjct: 175 KENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE E+AQS      +  AN W+HNG++ +   KMSKS GN + + EL E        +  
Sbjct: 235 HECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QYTK 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGIIDP------- 349
             +R  ML THYR P++++ + + +A+  + +    +        T+ G  D        
Sbjct: 287 EAVRYFMLSTHYRNPLNYSDEVMDQAQNSVERLANAAANIEHRLSTAIGSKDDEVSQEVA 346

Query: 350 --------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
                        + +D NT  AI A+ + A E+              H++L  FN    
Sbjct: 347 GKISAVLGEFHQKMQDDFNTPDAITAMFQWASEANQLLKEASIPAADLHEVLRAFNEMNG 406

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +L I          +   IE L+ ER+   K K ++ AD IR +L  +G +LED      
Sbjct: 407 VLRI--VNTGTGDLLDEEIEALIAERIEARKNKNWARADEIRDKLADEGIVLEDT----- 459

Query: 451 GQRMTRWKQK 460
             +  RW++K
Sbjct: 460 -AQGMRWRRK 468


>gi|255974563|ref|ZP_05425149.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|257087877|ref|ZP_05582238.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|255967435|gb|EET98057.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256995907|gb|EEU83209.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
          Length = 470

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|256960771|ref|ZP_05564942.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256951267|gb|EEU67899.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
          Length = 470

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|119505713|ref|ZP_01627782.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458423|gb|EAW39529.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 458

 Score =  552 bits (1423), Expect = e-155,   Method: Composition-based stats.
 Identities = 192/477 (40%), Positives = 273/477 (57%), Gaps = 43/477 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++  NTL  +   F+  DP+ I +YVCGPTVY+ AHIGNARP++ FD+LYR+LR  Y  
Sbjct: 3   ELRFTNTLTGQKEVFEPRDPNRITLYVCGPTVYNLAHIGNARPVVTFDMLYRVLRALY-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITDIDDKII  AR+       N+ I  +T + T ++ +D  +L  L+P  +P
Sbjct: 61  PTVVYARNITDIDDKIIAAARER------NEGIDAVTKEFTDKYREDMAQLNALSPDLEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT +I  M  LI  +I  GHAY A   ++FD +S+P+YG+ S R +++   G RV    
Sbjct: 115 RATENIKPMCDLITQLIARGHAYAAEGHVLFDVTSMPSYGALSGRNLEDMLAGARVEVAD 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S   EPGW+SPWG GRPGWH+ECSAM   +LG   DIHGGG DLIFP
Sbjct: 175 YKRSPGDFVLWKPSAEDEPGWDSPWGWGRPGWHLECSAMIRAHLGDAIDIHGGGRDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQSCC    +     W+HN +++++G KMSKS GN  T+ +LL         +P
Sbjct: 235 HHENERAQSCCGYGGD-FVRYWLHNAYVDMDGEKMSKSLGNVRTVRDLLGL-------YP 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R A+L THYR P++F+ + L  A++ L+ + Q   +   I P           +AL
Sbjct: 287 GEVLRFALLSTHYRSPLNFSGEVLDNAKLTLNSFYQALRNTSDICPEDVRPEDTLAFTAL 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPI-----FNASAHILGI---EVCKEHLNKNISI 407
            +DLNT  AI ALH   +   K              A   ++G+   +  +     + S 
Sbjct: 347 LDDLNTPKAIAALHASCKALNKADAKTAATCKGELLAMGRLMGLLGSDPEQWFTESSSSA 406

Query: 408 A-----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           A     IE+ +  RL     K F++AD +R +L++ G  LED        + T W++
Sbjct: 407 ALTPEDIEQRLAARLEARARKDFAAADAVRDELQAAGIELEDS------PKGTTWRR 457


>gi|257871414|ref|ZP_05651067.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257805578|gb|EEV34400.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 469

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 177/491 (36%), Positives = 254/491 (51%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL RK   FQ ++   ++MYVCGPTVY++ H+GN R ++ FD + R L Y   E 
Sbjct: 2   IKIYNTLTRKKEVFQPLEQGRVKMYVCGPTVYNYIHVGNGRSVVSFDTIRRYLEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A++      +  +   I  +  + F KDT  L     T  PR
Sbjct: 61  -VDYVMNFTDVDDKIIRTAKE------LKTSAPEIADRFIEAFNKDTAALNVQPATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +HI  +I  IQ ++  G+AY ANN++ + T    +YG  S + IDE ++G       E
Sbjct: 114 VMDHIEDIIAFIQVLVDKGYAYMANNDVYYRTRKFKHYGQLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKENEIAWDSPWGLGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +  AN W+HNG++ +  E  KMSKS GNF+T++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEEEEKMSKSLGNFVTVHEMV------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
           +     V+R  +  T YR PI ++   L EAE  L K      +                
Sbjct: 286 QKIDPQVLRFFLATTQYRRPIKYSETTLKEAETNLQKLRTALENAQFRLQNSKEGFPEGT 345

Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNAS 388
                   +   +  + +D N  + I  +++LA+      +   I           F   
Sbjct: 346 DHAILAEFEQRFVQEMDDDFNAANGITVVYELAKWLNTYSESASIDIELLTAAVEKFKEW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI    E L   +   IE+L++ER+   + + F+ +D IR  L+ KG ILED    
Sbjct: 406 LAIFGIYFVGEEL---LDEEIEQLIEERIQARQARDFARSDEIRDVLKEKGIILEDT--- 459

Query: 449 DNGQRMTRWKQ 459
               + TRW++
Sbjct: 460 ---AQGTRWRR 467


>gi|330998823|ref|ZP_08322550.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329576037|gb|EGG57556.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 464

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 188/475 (39%), Positives = 260/475 (54%), Gaps = 34/475 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R +  F++I P  + MYVCG TVYD  HIG+ R  I FDV  R L+    + 
Sbjct: 3   LKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TD+DDKII+RA +           S +    T++  +D   L CL P+ +PR
Sbjct: 62  -VKFVRNVTDVDDKIIKRAAERKIL------PSELAETYTKRMQEDLGELGCLPPSVEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IP+M+ LI+ +   G+AY+  N ++ F       YG+ S +K+DE + G RV  + 
Sbjct: 115 ATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSGKKVDELQPGERVRVEE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWKR+ P EP W+S WG+GRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 175 AKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDLMFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-ETKKFGGRSW 302
           HHENEIAQS  A+  +K  N W+H+G L + G KMSKS GNF TI + L ET    G   
Sbjct: 235 HHENEIAQSEAANG-KKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGDKN 293

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
               +R  +L +HYR PIDF+   + +A   L +      +    D              
Sbjct: 294 GNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADDNPLDWNEKYAAQFK 353

Query: 353 SALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHL------NKN 404
            A+ +D NT  A+  L +LA+E    K+ +L         +LGI             +  
Sbjct: 354 EAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLDPEAFVKGAVDSV 413

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              A+E L+ ER      K ++ AD IRK+L  K  +LED         +T W++
Sbjct: 414 DEAAVEALIAERKAAKAAKNWARADEIRKELLEKNIVLEDAPGG-----VTTWRR 463


>gi|257081388|ref|ZP_05575749.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256989418|gb|EEU76720.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
          Length = 470

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---LDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 456

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 190/477 (39%), Positives = 265/477 (55%), Gaps = 43/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+L +K   F++I P  ++MYVCG TVYDF H+G+AR +IVFD++YR  +    E 
Sbjct: 2   IKLFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA ++           ++T +   +   D   L  ++P  +P+
Sbjct: 61  -VTYVRNITDIDDKIITRAAEQ------GVTYGVLTKQFIDEMNADAEALGVISPDAEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +IQ +I  G+AY  +NN++ +  S    YG  S + +++ + G RV    
Sbjct: 114 ATESIDAMIIMIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSLEDLRAGNRVEVDK 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKN  DF+LWK + P EP W SPWG+GRPGWHIECSAMS+ +LGK FDIHGGG DL FP
Sbjct: 174 FKKNSFDFVLWKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +   + AN W+HNGF+ ++  KMSKS GNF TI E+L         + 
Sbjct: 234 HHENEIAQSEAFNGC-QMANYWLHNGFVKVDNEKMSKSLGNFFTIREILN-------HYE 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-QTSTSKGIIDPA----------VL 352
             ++R  +L   YR P++++   L +A+  L++       +   ID              
Sbjct: 286 PEIVRFFVLKAQYRSPLNYSDTHLEDAKQGLTRLYLAIRGNDTRIDQEIDWKNNFASQFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEHL-------NK 403
            AL +D NT  AI  L  LA E  K++      +    A+ILGI      L       + 
Sbjct: 346 DALDDDFNTSEAISILFSLANEVNKSNQDQEKQLLIQLANILGILEMDPELFLRGNIKSS 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  I I+ L+ +RL   K K +  AD IR  LE    +LED  N       T W++K
Sbjct: 406 DNDIDIDLLISDRLSAKKNKDYQKADEIRIFLEGHDILLEDTPN------GTIWRKK 456


>gi|16802285|ref|NP_463770.1| cysteinyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224498915|ref|ZP_03667264.1| cysteinyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224502466|ref|ZP_03670773.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254828699|ref|ZP_05233386.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|255028571|ref|ZP_05300522.1| cysteinyl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|21264004|sp|Q8YAB1|SYC_LISMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|16409604|emb|CAD00766.1| cysteinyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|258601104|gb|EEW14429.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 471

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 251/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|25010277|ref|NP_734672.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77407940|ref|ZP_00784691.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|30316158|sp|Q8E7F2|SYC_STRA3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|23094629|emb|CAD45847.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|77173487|gb|EAO76605.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|319744134|gb|EFV96507.1| cysteine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 447

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 164/468 (35%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D   L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKGAAE------AGMDTKSFSDKFISAFMEDVAALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G       E
Sbjct: 114 VIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT++++L       +S
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------KS 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               VIR  +    YR+P++FT + + +AE+ L     T                   A 
Sbjct: 286 VDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  + ++A+     H    +         I GI   +E L+ +    
Sbjct: 346 QEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELLEIFGIVFQEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+++R      + F++AD IR +L  +G  L D K+   G R TR
Sbjct: 402 IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKD---GVRWTR 446


>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 483

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 180/494 (36%), Positives = 267/494 (54%), Gaps = 64/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+  KI EF+ I+ + ++MYVCGPTVY++ H+GNARP++VFD L R   +   E 
Sbjct: 1   MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKGME- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII ++ +E        + S ++ K  + F +D ++L  L    +P+
Sbjct: 60  -VEFVQNFTDVDDKIINKSMEE------GTSASEVSEKYIKYFFEDISKLNILESVKRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +IQ +I +G AYE + ++ F+     +YG  S +KI+E ++G R+     
Sbjct: 113 VTENMSEVIEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEI 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+    EP WESPWG+GRPGWHIECSAM+  YLG  FDIHGGG DL+FPH
Sbjct: 173 KKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN W+HNGF+ + G KMSKS GNF  + E+LE        +  
Sbjct: 233 HENEIAQSKCAYHGN-FANYWLHNGFIQINGDKMSKSLGNFFLLREILE-------KFSG 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILL-------------------SKWPQTSTSK- 344
            VIRL +L THYR+PI+F+ + + + +  L                    K      S+ 
Sbjct: 285 NVIRLFILSTHYRKPINFSFENMEDTKKALQNIIKSMNKFENIVEKYKNEKIENVKNSEF 344

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNAS 388
                  D     A+  D+NT  A+  +    RE+ K             +++   +++ 
Sbjct: 345 SQKIDEFDKKFEEAMAEDMNTPQALATIFDQIRETNKFISTNESEFSTIYYEIKKSYDSL 404

Query: 389 AH----ILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLE 436
                 + GI +  E+  K             IE L++ R      K F  +D IR +L+
Sbjct: 405 KAKIENVFGIAIEVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSDEIRDELK 464

Query: 437 SKGFILEDYKNPDN 450
             G  ++D K+   
Sbjct: 465 VLGVEIKDNKDGST 478


>gi|331266879|ref|YP_004326509.1| cysteinyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683551|emb|CBZ01169.1| cysteinyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 447

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/468 (36%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKTAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN WIHNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWIHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +AE  L     T          +          
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKITYEQPFTGNVDTQELQDFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N+ + I  + ++A+       +  +     A   + GI   +E L+ +    
Sbjct: 346 VAAMDEDFNSANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|184154737|ref|YP_001843077.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|227514004|ref|ZP_03944053.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260663234|ref|ZP_05864126.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|229558713|sp|B2GAB5|SYC_LACF3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183226081|dbj|BAG26597.1| cysteinyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|227087648|gb|EEI22960.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|260552426|gb|EEX25477.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 472

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 163/492 (33%), Positives = 253/492 (51%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF       + MYVCGPTVY++ HIGNAR ++ FD + R L +   + 
Sbjct: 2   LKIYNTLTRQKEEFHPQQAGIVNMYVCGPTVYNYIHIGNARSVVAFDTVRRYLEFSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A+++         +  +  K  Q +++DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAKEQ------GITVPELAYKYIQAYMEDTAALNVEPATTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I  +I  I+++I  G+AY++  ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENIDGIISFIEDLIEKGYAYQSGGDVYYRARKFAHYGQLSGQSLDDLEVGASEHVSTE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   KK+P DF LWK + P E  W+SPWG GRPGWHIECS MS+ YLG   DIH GG DL
Sbjct: 174 EVAKKKDPLDFALWKAAKPGEIKWDSPWGAGRPGWHIECSVMSTKYLGDTLDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS       +  N W+HNGF+ +  +  KMSKS GNF+T+++L+      
Sbjct: 234 EFPHHENEIAQSEAKTG-HRFVNYWMHNGFVTIGRDNEKMSKSLGNFVTVHDLI------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
            +     V+R  M  T YR PI ++ + L EA+  L     T  +               
Sbjct: 287 -KEVDPQVLRFFMSTTQYRRPIQYSQESLVEAQANLEHLKNTYDNLAYRLKDATSGTDGG 345

Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNAS 388
                       ++A+ +D+N  + I  +++L R + +  +   +               
Sbjct: 346 VQRQLADFRARFVAAMDDDINVQNGIAVVYELMRFANQYVEQRLVQREPIVAIQLMLKRL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             + G+++      +     I++L+++R      K F+ +D IR QL  +G ILED    
Sbjct: 406 VAVFGVDLAV-SATEINDEKIKELIEKRNAARAEKDFALSDQIRDQLRDQGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TR++++
Sbjct: 462 ---PQGTRYRKE 470


>gi|154684612|ref|YP_001419773.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|187629789|sp|A7Z0L6|SYC_BACA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154350463|gb|ABS72542.1| CysS [Bacillus amyloliquefaciens FZB42]
          Length = 466

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 164/489 (33%), Positives = 252/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   
Sbjct: 1   MTITLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  ++ +  + + +D   L C      
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTVSERFIKAYFEDVGALGCRKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR   ++  +I  +  +I  G+AYE+  ++ F T +   YG  S++ IDE + G R+   
Sbjct: 113 PRVMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP--- 349
              ++R  ML  HYR PI+++ + L + +   ++              ST+    D    
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLEKTKNAFNRLKTAYSNLNHRLISSTNLTDNDEEWL 344

Query: 350 --------AVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAH---- 390
                   A   A+ +D NT +AI     LA+       E      ++  F +       
Sbjct: 345 AKIEEHRTAFEEAMDDDFNTANAISVWFDLAKVANYYMQEDNTADHVIKAFISMFDRIGS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + +E L          L+++R    + + F+ +D IR QL+S   ILED      
Sbjct: 405 VLGLTLGEEELVDEEIEE---LIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|306829040|ref|ZP_07462231.1| cysteine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428845|gb|EFM31934.1| cysteine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 447

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 247/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+ S ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDSKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            I  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEIADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMEDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDIQELQDFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +     A   + GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IETLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|270293221|ref|ZP_06199432.1| cysteine--tRNA ligase [Streptococcus sp. M143]
 gi|270279200|gb|EFA25046.1| cysteine--tRNA ligase [Streptococcus sp. M143]
          Length = 450

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/472 (36%), Positives = 246/472 (52%), Gaps = 39/472 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E            +  K    F +D T L     T
Sbjct: 61  GYE--VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PR    +  +I  ++++I  G+AYE+  ++ F      NY   + + +++ ++G    
Sbjct: 113 RHPRVVEFMADIIRFVEDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGR 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKTAKTGEISWDSPWGAGRPGWHIECSVMSTGILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGII 347
                   V+R      HYR+PI+FT + + +AE  L     T          +      
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDAQELQDF 344

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKN 404
               ++A+  D N  + I  + ++A+       +  +     A   + GI   +E L+  
Sbjct: 345 KDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLD-- 402

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 403 --AEIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 449


>gi|227555727|ref|ZP_03985774.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175132|gb|EEI56104.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315573949|gb|EFU86140.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581900|gb|EFU94091.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 478

 Score =  552 bits (1422), Expect = e-155,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 251/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|300811849|ref|ZP_07092315.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497168|gb|EFK32224.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 474

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/496 (34%), Positives = 256/496 (51%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E         +  +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARAE------GTTVPELAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT+ IP +I  IQ +I  G+AYE + ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYETDGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKVADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L+T   
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDILKTV-- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
                   V+R  M    YR  ID++ + L +A  +L ++  T           ++G+ D
Sbjct: 290 -----DPQVLRFFMASVQYRSQIDYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
           P              +A+ +D N  +A+ A+++       N +                 
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K       +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
                   + TRW ++
Sbjct: 465 T------PQGTRWSRE 474


>gi|256028172|ref|ZP_05442006.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289766105|ref|ZP_06525483.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717660|gb|EFD81672.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 472

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 182/492 (36%), Positives = 270/492 (54%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           RAT++I +MI +IQ +I  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 RATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++ + G KMSKS G+F+ + ++L       + +
Sbjct: 234 PHHENEMAQSKCACGG-TFARYWMHNGYIKINGEKMSKS-GSFVLLRDIL-------KHF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIRL +L +HYR+P+DF+ + L + +  L +   T      +D              
Sbjct: 285 EGRVIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQELL 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
                     + A+  D NT  A+  + +L +   K  D   I                 
Sbjct: 345 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLVM 404

Query: 391 ----ILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 405 IIQNVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 464

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 465 KDK------TTW 470


>gi|309799903|ref|ZP_07694108.1| cysteinyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116493|gb|EFO53964.1| cysteinyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 457

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/465 (37%), Positives = 244/465 (52%), Gaps = 33/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 12  IKIYDTMSRDLREFVPITKGEVLMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 71  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRYPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 124 VVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 184 TARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ LET       
Sbjct: 244 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALET------- 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R      HYR+PI+FT + + +AE  L     T      G +DP          
Sbjct: 296 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDPGELQAFKDKF 355

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++A+  D NT + I  + ++A+     +    +    A +L        + + +   IE 
Sbjct: 356 VAAMDEDFNTANGITVIFEMAKWINSGNYDAAVKETLAAML-EVFGVVFVEEVLDEEIEA 414

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L+Q+R      K F++AD IR QL ++G  L D K+   G R TR
Sbjct: 415 LIQKRQEARANKDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 456


>gi|327468352|gb|EGF13837.1| cysteine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 447

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/468 (36%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+     +   D+   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTSDIKAAFAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQVARGNRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|257088530|ref|ZP_05582891.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|256997342|gb|EEU83862.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
          Length = 470

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 249/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 476

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 178/497 (35%), Positives = 251/497 (50%), Gaps = 60/497 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNT+ ++  EF   +   + MY CGPT Y++ H+GNAR ++VFD++ R L Y   
Sbjct: 1   MTVKIYNTIHKEKEEFIPREAGKVAMYACGPTTYNYFHLGNARMLVVFDMVRRYLAYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYV+N TD+DDKII+RA +E      N     +  +  +++ KD   L     T  
Sbjct: 61  E--VTYVQNFTDVDDKIIKRASEE------NCEPLALAGRYIEEYYKDANALNIQPATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT+HI +MI +I+ +   G AY    ++ F     P YG  S R +++ + G RV   
Sbjct: 113 PKATDHIKEMIEIIKGLEKKGLAYPVEGDVYFAVEHFPQYGRLSGRNLEDLQAGARVEID 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K NP DF LWK++ P EP W SPWG GRPGWHIECSAM+  YLG  FDIHGGG DL+F
Sbjct: 173 DKKLNPMDFALWKKAKPGEPAWPSPWGDGRPGWHIECSAMALKYLGPNFDIHGGGGDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      E+ A  W+HN F+ +   KMSKS GNF  I ++L       + +
Sbjct: 233 PHHENEIAQSEGYLDGEQFARYWMHNAFITVNQEKMSKSLGNFFMIRDIL-------KKF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
           P  V+R  +L THYR P+DF  ++L  A   L +   +    G                 
Sbjct: 286 PGEVVRFYLLGTHYRSPLDFDDEKLEMAARGLDRLKTSVRLAGEALSKGKSTDSAGTRGE 345

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
                     A   A+ +D N+  A  +L  LA+E                +        
Sbjct: 346 LLNASSKARAAFEEAMEDDFNSAQAYASLFDLAKEINTALNEGGWTGAQIAEARDTLIDL 405

Query: 389 AHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           A ILG ++ K+       +   +  +E +++ R      K +S+AD IR +L+    ILE
Sbjct: 406 AGILGFDLQKDSEVPAGESGKFNAVMELVLELRAKARADKDWSTADLIRDRLKEASIILE 465

Query: 444 DYKNPDNGQRMTRWKQK 460
           D          +RW  K
Sbjct: 466 DT------AEGSRWYLK 476


>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|187629841|sp|A4SX62|SYC_POLSQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 473

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 188/491 (38%), Positives = 256/491 (52%), Gaps = 56/491 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+ I P  ++MYVCG TVYDF HIG+AR MIVFD++ R LR    E 
Sbjct: 2   LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        + IS +T++       D+  L  + P  +PR
Sbjct: 61  -VQYVRNITDIDDKIIKRALENS------EPISALTNRFIAAMHADSDELGLMHPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I QM  +I  +I +  AY+  + ++ F    +P YG  S + +DE   G RV    
Sbjct: 114 ATDYIQQMQGMIGKLIENELAYQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIGG 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W SPWG GRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 174 GKRDPLDFVLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIE-------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            FPHHENEIAQS  A   +          N W+HNG + +   KMSKS GNF  I ++L 
Sbjct: 234 QFPHHENEIAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVL- 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
                 +S+   V+R  ML  HYR PI+++  +L EA   L++     T    +D     
Sbjct: 293 ------KSFDPEVVRFFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEVDTVPID 346

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILG---- 393
                      A+ +D NT  AI  L  LA E  +        L  +  +    L     
Sbjct: 347 LQNPWAKRFADAMNDDFNTPEAIAVLFDLASEVNRAQGAEKQMLAGLLKSLGGTLNFLQR 406

Query: 394 -----IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                ++   +  +   S  IE+ +  R+   + K F+ AD IRK L  +G +LED    
Sbjct: 407 DPTNFLQAGSKDQSGLSSEQIEEHIAARVAAKQAKDFAKADGIRKALLEQGVVLEDKPGG 466

Query: 449 DNGQRMTRWKQ 459
                +T W++
Sbjct: 467 -----ITEWRR 472


>gi|256846544|ref|ZP_05552001.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256718313|gb|EEU31869.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 473

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 179/492 (36%), Positives = 272/492 (55%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT+++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NISIKEIAERYIKAYFEDTSKINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L       + +
Sbjct: 234 PHHENERAQSKCGCGG-TFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KYF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
              VIRL +L +HYR+P++F+   L + +  L +   T                      
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
            +K  I+   + A+  D NT  A+  + +L +   K  D + I                 
Sbjct: 346 ATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLVM 405

Query: 390 ---HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|300704462|ref|YP_003746065.1| cysteine tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299072126|emb|CBJ43458.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
          Length = 465

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 175/484 (36%), Positives = 252/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+   +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIESGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P H+
Sbjct: 62  G--VTYVRNITDIDDKIIKRA------VENGETIGALTDRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQAEGANG-NTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            + +   V+R  +L +HYR  ++++   L +A   L++             A        
Sbjct: 287 -KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSESH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEH----- 400
                 A+ +D NT  A+  L +LA E  K     L     A   ++G+     H     
Sbjct: 346 GQRFREAMNDDFNTPVAMAVLFELASEVNKTRSAALASQLAALGGVMGLLGRDPHAFLQG 405

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +   +  +E  ++ R +    + F+ AD IR  L + G +LED         +T
Sbjct: 406 GVGAAADGLDTAEVEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGG-----VT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|229470557|sp|B1XUY8|SYC_POLNS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 473

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 190/491 (38%), Positives = 255/491 (51%), Gaps = 56/491 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+ I P  ++MYVCG TVYDF HIG+AR MIVFD++ R LR    E 
Sbjct: 2   LQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      I   + IS +T++       D+  L  + P  +PR
Sbjct: 61  -VLYVRNITDIDDKIINRA------IENGEPISALTNRFVDAMHADSDELGLMHPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++I QM  +I  +I +  AY+A + ++ F    +P YG  S + +DE   G RV    
Sbjct: 114 ATDYIAQMQGMIGKLIENELAYQANDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVGD 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W+SPWG GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 174 GKRDPLDFVLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIE-------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            FPHHENEIAQS  A   +          N W+HNG + +   KMSKS GNF  I ++L 
Sbjct: 234 QFPHHENEIAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVL- 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------- 342
                 +S+   VIR  ML THYR PI+++  +L EA   L +                 
Sbjct: 293 ------KSFDPEVIRFFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQTISLG 346

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------HDLLPIFNASAHILG- 393
           S          A+ +D NT  AI  L  +  E  +          ++L    AS + L  
Sbjct: 347 SSNPWAKRFADAMNDDFNTPEAIAVLFDIVSEVNRAQGEEKQVLANILKALGASLNFLQR 406

Query: 394 -----IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                ++   +         IE+ +  R+   + K F+ AD IRK L  +G +LED    
Sbjct: 407 DPTVFLQSSAKDQAGLSPEQIEEQIAARVAAKQAKDFAKADAIRKALLEQGIVLEDKPGG 466

Query: 449 DNGQRMTRWKQ 459
             G     W++
Sbjct: 467 LTG-----WRR 472


>gi|284800534|ref|YP_003412399.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284993720|ref|YP_003415488.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284056096|gb|ADB67037.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284059187|gb|ADB70126.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 471

 Score =  551 bits (1421), Expect = e-155,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 251/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQSDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|319891494|ref|YP_004148369.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161190|gb|ADV04733.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465335|gb|ADX77488.1| cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 466

 Score =  551 bits (1420), Expect = e-155,   Method: Composition-based stats.
 Identities = 171/481 (35%), Positives = 259/481 (53%), Gaps = 47/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   FQ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKEVFQPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      + + +  I  +  Q F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKLIKRSQE------LGETVPEIAERYIQAFYEDTEALNVKKATSNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             +H+  +I  I+ ++  G+AYE+  ++ F T    +YG  S + ID+ K+G R+ +  +
Sbjct: 114 VMDHMDDIIKFIKKLVDEGYAYESGGDVYFRTRQFEDYGKLSHQSIDDLKVGARIEQGEN 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK++ P E  WESP+G GRPGWHIECS M+   LG   DIH GG DL FPH
Sbjct: 174 KEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFEKLGPTIDIHAGGSDLQFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS   +  E  AN W+HNGF+N++  KMSKS GNFI +++++       +    
Sbjct: 234 HENEIAQSEAHNH-ETFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
            V+R  M+  HYR PI++ ++ +  A   L +   +  +                     
Sbjct: 286 DVLRFFMISVHYRSPINYNLELVEAARSGLERIRNSYQALTERETVATDLTNDATMLTQI 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
             I     + + +D NT +AI A + L + + K                 +F   + +LG
Sbjct: 346 DAILTQFETVMDDDFNTANAITAWYDLVKLANKYLLEDNTSTQVIQRFKEVFAIFSDVLG 405

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           + +   H+   +   IE+L++ER    + K ++ AD IR QL+++  ILED       +R
Sbjct: 406 VPLTSNHVEGLLDEEIERLIEERNAARQAKDYARADEIRDQLKAQNIILEDTPQGVRYKR 465

Query: 454 M 454
            
Sbjct: 466 G 466


>gi|262281989|ref|ZP_06059758.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262443|gb|EEY81140.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 450

 Score =  551 bits (1420), Expect = e-155,   Method: Composition-based stats.
 Identities = 168/469 (35%), Positives = 244/469 (52%), Gaps = 36/469 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E            +  K    F +D T L     T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVTALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PR    +  +I  +++++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 RHPRVVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L     
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID------- 348
             ++    V+R      HYR+PI+FT + + +A   L     T      G  D       
Sbjct: 287 --KTIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQAF 344

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKN 404
                +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAKLLEVFGIVFVEEVLDAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               IE+L++ER +    + F++AD IR  L ++G  L D K+     R
Sbjct: 405 ----IERLIEERQVARANRDFATADRIRDDLAAQGIKLLDTKDGVRWTR 449


>gi|227873421|ref|ZP_03991676.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
 gi|227840726|gb|EEJ51101.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
          Length = 468

 Score =  551 bits (1420), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/486 (35%), Positives = 245/486 (50%), Gaps = 54/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ ++  EF  I+   IRMYVCGPTVY+  HIGNARPMIVFD   R + Y   + 
Sbjct: 1   MKIYNTMSKQKEEFVPIEEGKIRMYVCGPTVYNLIHIGNARPMIVFDTFRRFMEYKGYKV 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
           C  YV N TD+DDKII+ A  E          S IT +   +  KD + L  +  T  P+
Sbjct: 61  C--YVSNYTDVDDKIIKTAMDE------GTDCSSITERYISEVEKDMSDLNIMEATAHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ LI  ++  G AY  +  + +DT++ P+YG  S + +++ + G R   V  
Sbjct: 113 ATEEIQGMVNLIDVLVKKGFAYPVDGTVYYDTTAFPSYGKLSHKNMEDLRSGLRELKVSG 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  KK+P DF+LWK     EP W SPW  GRPGWH EC  M+  Y G   DIH GG DL+
Sbjct: 173 EEEKKSPTDFVLWKPKKMGEPYWNSPWSEGRPGWHTECCVMAPKYCGGALDIHAGGEDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ   A   E+ A  W+HN F+N++ +KMSKS GNF T+ ++          
Sbjct: 233 FPHHENEIAQYEAAHG-EQFARYWMHNAFINIDNKKMSKSLGNFFTVRDVTS-------Q 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
           +   V+R  ML  HYR P++F+   +  A+  L +                         
Sbjct: 285 FDPMVLRFYMLSAHYRSPLNFSKDLMEAAKTSLGRILTAIWRLQDLIPRLEEKAFSKEEE 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
           +   +    +      + +DLNT  AI  + +L R +               LL      
Sbjct: 345 ENVKTAEGYEAIFSEKMEDDLNTADAITQIFELVRLANATVEEHSSKAYGEALLQKLETL 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LGI    E   + +   +E L+Q+R    K K F+ AD IR +L + G  L+D +N 
Sbjct: 405 MAVLGIRT--EKKEEELGAKVEALIQQRQDARKNKDFAKADQIRDELLAMGIQLKDTRNG 462

Query: 449 DNGQRM 454
              Q++
Sbjct: 463 VEWQKI 468


>gi|313887550|ref|ZP_07821233.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846428|gb|EFR33806.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 465

 Score =  551 bits (1420), Expect = e-155,   Method: Composition-based stats.
 Identities = 179/489 (36%), Positives = 250/489 (51%), Gaps = 59/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  +F  I    + +Y CGPTVY+F H+GNARP++VFD L R   Y   + 
Sbjct: 1   MKLYNTLTRKKEDFVPIKEGEVGIYNCGPTVYNFIHVGNARPLVVFDTLRRYFDYKGMK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDK+I +A  E   +      S I  +  ++F KD   L      T  P
Sbjct: 60  -VKFVVNFTDIDDKMINKANDEGVKV------SDIAERYIKEFKKDAGGLHLYDYETINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI ++I  IQ +I  G AY +N ++ FD S   +YG  S++ +++   G RV    
Sbjct: 113 RATEHIDEIIDFIQTLIDKGAAYVSNGDVYFDISHAKDYGKLSKKNLEDLISGHRVDVND 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF LWK     EP W++PWG GRPGWHIECS M+   +G   DIH GG DL FP
Sbjct: 173 NKKNPQDFALWKNKKEGEPYWQAPWGEGRPGWHIECSVMAKTIIGDNIDIHTGGEDLQFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   + +   AN W+HNG + ++  KMSKS GNF T+ E+ E        + 
Sbjct: 233 HHENEIAQSETCNGV-PFANYWLHNGMITVDNEKMSKSKGNFFTVREISE-------EFD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
             V+R  +L T YR PI+F+ + + + +    +                           
Sbjct: 285 LEVLRFFLLTTQYRSPINFSREVMEQTKNSSKRLYNAKYKLEDAIEKTSVEKMTEEEENL 344

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
                        A+ +DLNT  AI A+  L ++   N D           L +      
Sbjct: 345 LKGYDKHIEKFEKAMEDDLNTADAITAIFDLVKDINLNLDENSSKEVLEKSLELLKKLTK 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI    E   + IS  IE+L++ER    K K F+ AD IR +L++ G  +ED ++   
Sbjct: 405 VLGI---MEEEREEISGDIEELIKERNEARKNKDFTRADEIRDELKNMGIEIEDTRS--- 458

Query: 451 GQRMTRWKQ 459
               T WK+
Sbjct: 459 ---GTTWKR 464


>gi|332365578|gb|EGJ43338.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 447

 Score =  551 bits (1420), Expect = e-155,   Method: Composition-based stats.
 Identities = 173/468 (36%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKKE------GITPKEVADKYIAAFHEDVTALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVAKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+          +   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRNELAAQGIKLLDTKD---GVRWTR 446


>gi|307296635|ref|ZP_07576455.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306495971|gb|EFM65559.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|315029626|gb|EFT41558.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4000]
          Length = 478

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L       ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEELG---DAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|308171985|ref|YP_003918690.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604849|emb|CBI41220.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328551795|gb|AEB22287.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328910056|gb|AEB61652.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 466

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 161/489 (32%), Positives = 250/489 (51%), Gaps = 57/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL RK   F  ++   ++MYVCGPTVY++ HIGNARP IV+D +   L Y   
Sbjct: 1   MTITLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  ++ +  + + +D   L C      
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTVSERFIKAYFEDVGALGCRKADLH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR   ++  +I  +  +I  G+AYE+  ++ F T +   YG  S++ IDE + G R+   
Sbjct: 113 PRVMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK +   E  W+SPWG+GRPGWHIECSAM   YLG   DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N++  KMSKS GNF+ +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
              ++R  ML  HYR PI+++ + L + +   ++     ++                   
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLEKTKNAFNRLKTAYSNLNHRLISSTNLTDNDDEWL 344

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAH---- 390
                   A   A+ +D NT +AI     LA+       E      ++  F +       
Sbjct: 345 AKIEEHRTAFEEAMDDDFNTANAISVWFDLAKLANYYMQEDNTADHVIKAFISMFDRIGS 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + +E L          L+++R    + + F+ +D IR QL+S   ILED      
Sbjct: 405 VLGLTLGEEELVDEEIEE---LIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456

Query: 451 GQRMTRWKQ 459
             + TRWK+
Sbjct: 457 -AQGTRWKR 464


>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 178/510 (34%), Positives = 269/510 (52%), Gaps = 74/510 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +KK + +YNT+ RK   F+      + MYVCG T YDF+HIG+AR  + FD+LYR L+Y 
Sbjct: 80  IKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYL 139

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             + C  YVRN TD+DDKII RA +      + +    ++ +   +F +D + L CL P+
Sbjct: 140 GYDVC--YVRNFTDVDDKIIARANE------VGENPISLSRRFCDEFHQDMSYLHCLPPS 191

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR ++H+PQ+I +I+ I+ +G AY  + ++ F     P+YG  S RK+++ + G RV 
Sbjct: 192 VEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVA 251

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NPADF LWK +   EP WESPWG GRPGWHIECSAMSS YLG  FDIHGGG+DL
Sbjct: 252 IDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDL 311

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEI QSC A         W+HNGF+ +   KMSKS GNF TI +++E       
Sbjct: 312 MFPHHENEIVQSCAACCESN-IRYWVHNGFVTINSEKMSKSLGNFFTIRQVIEL------ 364

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSK-- 344
            +    +RL ++ THYR PI+++               Q L +++ LLS++ + +     
Sbjct: 365 -YHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSI 423

Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLP 383
                     +  + + ++ +DL+T   + AL    +                +   L  
Sbjct: 424 PQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAA 483

Query: 384 IFNASAHIL------------GIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSA 428
           +     H+L             +   +E   K +      +++ ++ER +  K K++  +
Sbjct: 484 LEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKNKEYEKS 543

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           D IRK+L + G  L D          T W+
Sbjct: 544 DAIRKELAAVGIALMDS------PEGTTWR 567


>gi|327472399|gb|EGF17830.1| cysteine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 447

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/465 (35%), Positives = 243/465 (52%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKKE------GITPKEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  +++++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VVEFMDDIIRFVEDLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  +N W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFSNYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQTDSAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE+L++ER      + F++AD IR +L ++G  L D K+     R
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446


>gi|255971591|ref|ZP_05422177.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257421384|ref|ZP_05598374.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|255962609|gb|EET95085.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|257163208|gb|EEU93168.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|323479282|gb|ADX78721.1| cysteinyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 470

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVADRFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|188997490|ref|YP_001931741.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|229558793|sp|B2V6B4|SYC_SULSY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188932557|gb|ACD67187.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 487

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 177/508 (34%), Positives = 250/508 (49%), Gaps = 73/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL  K  +F  I P  +++Y CG TVYD+ H+G+ R +IVFD++ R LRY   
Sbjct: 1   MSLKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN TD+DDKII RA+ E          S+I+ K  +++  D  +        +
Sbjct: 61  N--VIFVRNFTDVDDKIINRAKNECLP------FSVISDKFIKEYFDDAEKFRIEPADIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HIP +I  IQ ++  G+AYEA+ ++ F       YG  S+R IDE   G R+   
Sbjct: 113 PRVTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK +   EP WESPWG+GRPGWH EC AM   +LG+  DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  WIHNG + + G+KMSKS GN+I + E+          +
Sbjct: 233 PHHENEIAQAEALTG-KPFARYWIHNGLVTVNGQKMSKSLGNYIKLKEIYS-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
              ++RL +L  HYR P+DF+  ++ E +    +         +++              
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIDENFEGDLYN 344

Query: 350 -------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA-- 389
                     SA+ +D NT  A+ +L  L RE     D            +  +  +A  
Sbjct: 345 AIQKAQSGFYSAMSDDFNTPEALASLFGLVREMNILRDKAIKHGGISKKAIESYKEAAKT 404

Query: 390 ------HILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                  I G+    +                     I+ L++ R    K K+F+ AD I
Sbjct: 405 LHDIGRDIFGLFDSLQPCIKQEEVKVKEKEESINEDLIQVLIEAREKARKEKQFTIADLI 464

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R +L  KG ILED          T+WK+
Sbjct: 465 RDKLAEKGIILED------APFGTKWKK 486


>gi|307284103|ref|ZP_07564273.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306503474|gb|EFM72723.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|315026628|gb|EFT38560.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 478

 Score =  551 bits (1420), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 251/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|114570948|ref|YP_757628.1| cysteinyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122315352|sp|Q0AM03|SYC_MARMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114341410|gb|ABI66690.1| cysteinyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 461

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 194/477 (40%), Positives = 271/477 (56%), Gaps = 39/477 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +++T+ R+  +F+  DP  + MYVCGPTVY +AHIGNARP +VFD L+R+LR  YG
Sbjct: 2   TSLTLFDTMARRKRDFEPTDPGRVTMYVCGPTVYSYAHIGNARPAVVFDTLFRVLRRLYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y RNITD+DDKIIE AR+    I        ITS     +  D   L    PT +
Sbjct: 62  EDQVIYARNITDVDDKIIETARESGKPI------EDITSHYADIYRADMGALGVTLPTIE 115

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT+HIP+MI ++QN++  GHAYEA+  ++FD SS   YG  S R +D+   G RV   
Sbjct: 116 PHATDHIPEMIGMVQNLVYSGHAYEADGHVLFDVSSYEKYGRLSNRDLDDMIAGARVEVA 175

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++PADF+LWK +   EPGW+SPWGRGRPGWH+ECSAMS  +LGK  DIHGGG DL+F
Sbjct: 176 SYKRSPADFVLWKPAKDDEPGWDSPWGRGRPGWHLECSAMSEKHLGKTIDIHGGGTDLVF 235

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA +    AN W+HNGFL +   KMSKS GN   +++L+       + +
Sbjct: 236 PHHENEIAQSVCAHKGAPMANYWLHNGFLTMGTDKMSKSLGNVQLVHDLI-------KDY 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------QTSTSKGIIDPAVLSAL 355
           P  V+R A+L  HYR P+ +T   L +    L +         +   +   + PA L AL
Sbjct: 289 PGEVLRYALLTAHYRAPLTWTADLLAKTRRSLDRIYGVLRRLGEIEAAPSDVPPAFLEAL 348

Query: 356 YNDLNTVSAIQALHKLARESTKN------HDLLPIFNASAHILGIEVCKE-------HLN 402
           ++DLNT  A+  L +LA  + K               A+A +LG+             L+
Sbjct: 349 HDDLNTPKALSELFQLAGNANKALSDVEKAQAKGELLAAAGMLGLGQADPDAWFGLTDLD 408

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 I+ L+  R    + K + +AD +R +L +    ++D      G   + W++
Sbjct: 409 PAERARIDDLIVRRQTAREEKDWPTADAVRDELNALKVQVDD------GPEGSTWRK 459


>gi|261252446|ref|ZP_05945019.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260935837|gb|EEX91826.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 436

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/458 (36%), Positives = 240/458 (52%), Gaps = 47/458 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T+YD  HIG+ R  + FDV+ R LRY   +  +T+VRNITDIDDKII+RA +  
Sbjct: 1   MYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD--LTFVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++   +T +   +   D   L    P  +PRAT +I ++I L++ +I  G AY 
Sbjct: 58  -----GESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEIIELVETLIERGFAYV 112

Query: 148 AN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+  +++F+ +    YG  S + +++ + G RV  +  K++  DF+LWK S P EP WES
Sbjct: 113 ADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDFVLWKMSKPGEPTWES 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+S  LG  FDIHGGG DL FPHHENEIAQSCCA    +  N W+
Sbjct: 173 PWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGT-QYVNTWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF TI ++L         + A  +R  ++  HYR  ++++   
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEDN 284

Query: 327 LTEAEILLSKWPQTSTSKGIIDPA---------VLSALYNDLNTVSAIQALHKLAREST- 376
           L +A   L +   +     +   A            A+ +D NT  A   L  +ARE   
Sbjct: 285 LNQARSALERLYTSLRGLDLTVSAVGGEEYVARFNDAMNDDFNTPEAYSVLFDMAREINR 344

Query: 377 -KNHDLLPI------FNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKM 422
            K  D+             A ++GI              N +    IE L++ R      
Sbjct: 345 LKAEDVAAASSLGVTMRQLADVIGILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAS 404

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K +++AD  R +L   G +LED      G   T W++K
Sbjct: 405 KDWANADMARDKLTEMGIVLED------GPEGTTWRRK 436


>gi|325126288|gb|ADY85618.1| Cys-tRNA synthetase cycrs [Lactobacillus delbrueckii subsp.
           bulgaricus 2038]
          Length = 474

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 171/496 (34%), Positives = 256/496 (51%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E         +  +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEAGAE------GTTVPELAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 P-----------AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
           P              +A+ +D N  +A+ A+++       N +                 
Sbjct: 345 PNLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K       +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
                   + TRW ++
Sbjct: 465 T------PQGTRWSRE 474


>gi|17228587|ref|NP_485135.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|21264005|sp|Q8YXW5|SYC_ANASP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|17130438|dbj|BAB73049.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 486

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 173/500 (34%), Positives = 249/500 (49%), Gaps = 58/500 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R+    + ++P  ++MY CG TVYD+ H+G+AR  IV+D + R L +   
Sbjct: 1   MTLTIYNTLTRRQEPLETVEPGKVKMYCCGVTVYDYCHLGHARSYIVWDTIRRYLIWRGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y++N TDIDDKI+ RA+++         ++ ++++    +  D  RL  L     
Sbjct: 61  G--VKYIQNFTDIDDKILNRAKEQGL------TMAEVSNRFIDAYFADIRRLNVLDADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PR T HIP++  LIQ +   G AY    ++ +     P+YG  S R++++ + G      
Sbjct: 113 PRVTEHIPEIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVD 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               +  K++P DF LWK + P EP W+SPWG GRPGWHIECSAM    LG   DIHGGG
Sbjct: 173 AEDSEPKKQHPFDFALWKAAKPGEPAWDSPWGAGRPGWHIECSAMIRSKLGATIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET-KK 296
            DLIFPHHENEIAQS  A   +  A  W HNG + + G+KMSKS GNFITI ELL+    
Sbjct: 233 GDLIFPHHENEIAQSEAAMN-QPLARYWTHNGMVMVNGQKMSKSLGNFITIRELLDGVGS 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
           +         +RL +L  HYR+P+DFT + +  AE                     W Q 
Sbjct: 292 WKEDPVNPMAVRLFVLQAHYRKPLDFTEEAIATAENSWKTLKEGLLFGYQYGEKLGWGQE 351

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
           S     +         +D N    +  L +LA+E  +  ++L                  
Sbjct: 352 SAIIPELATRFQELGDDDFNFSGGLAVLFELAKELRREGNILVHEGTTKTPSDELQRQWN 411

Query: 384 IFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                A ILG+E   +   +         IE L+++R    K K FS +D IR +L+++G
Sbjct: 412 TLVTLAKILGLEAKLDDETQTQAGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQG 471

Query: 440 FILEDYKNPDNGQRMTRWKQ 459
             L D        + TRW +
Sbjct: 472 VTLIDS------PQGTRWHR 485


>gi|16799348|ref|NP_469616.1| cysteinyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|21264012|sp|Q92F36|SYC_LISIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|16412700|emb|CAC95504.1| cysteinyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 471

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  A  W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKDIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|293382260|ref|ZP_06628200.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
 gi|293386691|ref|ZP_06631264.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
 gi|312908762|ref|ZP_07767701.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312979222|ref|ZP_07790926.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|291080374|gb|EFE17738.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083860|gb|EFE20823.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
 gi|310625200|gb|EFQ08483.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311287987|gb|EFQ66543.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 478

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 251/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|237743811|ref|ZP_04574292.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432842|gb|EEO43054.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 472

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 182/492 (36%), Positives = 270/492 (54%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           RAT++I +MI +IQ +I  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 RATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++ + G KMSKS G+F+ + ++L       + +
Sbjct: 234 PHHENEMAQSKCACGG-TFARYWMHNGYIKINGEKMSKS-GSFVLLRDIL-------KHF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIRL +L +HYR+P+DF+ + L + +  L +   T      +D              
Sbjct: 285 EGRVIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQELL 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
                     + A+  D NT  A+  + +L +   K  D   I                 
Sbjct: 345 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKEGLEVIDEVYSYLVM 404

Query: 390 ---HILGIEV-CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  K  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 405 IIQDVLGVKLKLKVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 464

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 465 KDK------TTW 470


>gi|313124319|ref|YP_004034578.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
 gi|312280882|gb|ADQ61601.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ND02]
          Length = 474

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 173/496 (34%), Positives = 257/496 (51%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E         +  +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARAE------GTTVPELAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSKENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
           P              +A+ +D N  +A+ A+++       N +                 
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K       N    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGNDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
                   + TRW ++
Sbjct: 465 T------PQGTRWSRE 474


>gi|225017556|ref|ZP_03706748.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
           DSM 5476]
 gi|224949706|gb|EEG30915.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
           DSM 5476]
          Length = 464

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 173/477 (36%), Positives = 259/477 (54%), Gaps = 50/477 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  EF+ I P+ + MY CGPTVY++ HIGNARP+IVFD L     +   + 
Sbjct: 1   MKVYNTLTRQKEEFKTIHPNEVDMYACGPTVYNYIHIGNARPIIVFDCLRSYFEFRGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII++A +E          S I+ K  +++ KD   L     T  P+
Sbjct: 60  -VKFVQNFTDVDDKIIKKANEEGVEA------SEISEKYIKEYEKDAKGLNVRPATIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I ++Q+++ +G+AYE+  ++ F T+    YG  S   +++ + G RV     
Sbjct: 113 VTQSMDMIIDIVQHLVDNGYAYESQGDVYFRTTKFKEYGKLSHMPLEDLEAGNRVEVSDI 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP W+SPWG+GRPGWHIECSAM+++YLGK  D+H GG DLIFPH
Sbjct: 173 KEDPMDFAVWKAAKPGEPAWDSPWGKGRPGWHIECSAMATNYLGKTIDLHCGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN W+HNG++N++ RKMSKS GNF T+ E+ E   +       
Sbjct: 233 HENEIAQSECATGA-VFANYWMHNGYINVDNRKMSKSLGNFFTVREVAEKFGY------- 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
             IR  ML  HYR PI++ V+ + + +  L +      +                     
Sbjct: 285 EPIRYMMLQAHYRSPINYNVEVIEQCKASLERMYNFKKNIAFALSKAEDGEFTDKQKEAI 344

Query: 348 ---DPAVLSALYNDLNTVSAIQALHKLAREST----------KNHDLLP--IFNASAHIL 392
                  + A+ +D NT  AI A+ +L R+            K H  L   IF+    +L
Sbjct: 345 LARKQQFIDAMEDDFNTADAISAVFELIRDINPLISGETLGSKQHIALAKEIFDELIGVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           G+    +   + I   +  LV++R    K K F  AD +R ++   G+ +E+ +   
Sbjct: 405 GLLYNDKE--EEIPAEVTALVEQRAAARKEKNFKLADELRDRIGELGYAIEETRQGT 459


>gi|296134921|ref|YP_003642163.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
 gi|295795043|gb|ADG29833.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
          Length = 460

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 189/476 (39%), Positives = 268/476 (56%), Gaps = 43/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R    F  I+P ++RMYVCG TVYD+ HIG+AR M+VFD+L R L+      
Sbjct: 4   LHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQGL-- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        + I  +T +      +D   L    PTH+PR
Sbjct: 62  RVTYVRNITDIDDKIIRRAQEN------GETIRALTDRFIAAMHEDADALGVERPTHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ LI  +   G AY ++  ++ F   + P YG  S + +DE + G RV    
Sbjct: 116 ATDYVPQMLDLIGKLKTRGLAYRDSAGDVNFHVRAFPGYGKLSGKSLDELRAGERVEVDT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W S  G GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  AN+W+HNGF+ ++G KMSKS GNF TI ++L       +
Sbjct: 236 QFPHHENEIAQSEGASG-KPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDIL-------Q 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PA 350
              A  +RL ++  HYR P++++ + L +A   L++          +            A
Sbjct: 288 HVDAETVRLFIVRAHYRSPLNYSDEHLQDAHAALTRLYTALDPFADLPARLDWSHPRAQA 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI------EVCKEHLN 402
             +A+ +DLNT  A+  L +LA E  K  + DL  +      +LG+      E  +    
Sbjct: 348 FAAAMNDDLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKAA 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +E+LVQER+   + + F+ AD IR +L +KG +LED         +T W+
Sbjct: 408 AVDAAWVEQLVQERIAAKQARNFAEADRIRAELSAKGIVLEDKPGG-----ITVWR 458


>gi|323350502|ref|ZP_08086164.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322123184|gb|EFX94869.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 447

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVTALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  +N W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFSNYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQEARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|77413794|ref|ZP_00789974.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77160156|gb|EAO71287.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 447

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 163/468 (34%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D   L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKGAAE------AGMDTKSFSDKFISAFMEDVAALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G       E
Sbjct: 114 VIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT++++L       + 
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------KI 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               VIR  +    YR+P++FT + + +AE+ L     T                   A 
Sbjct: 286 VDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  + ++A+     H    +         I GI   +E L+ +    
Sbjct: 346 QEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELLEIFGIVFQEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+++R      + F++AD IR +L  +G  L D K+   G R TR
Sbjct: 402 IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKD---GVRWTR 446


>gi|256956971|ref|ZP_05561142.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257078648|ref|ZP_05573009.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294780003|ref|ZP_06745382.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|256947467|gb|EEU64099.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256986678|gb|EEU73980.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294452897|gb|EFG21320.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
          Length = 470

 Score =  550 bits (1419), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVADRFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|227518065|ref|ZP_03948114.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256964025|ref|ZP_05568196.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257084048|ref|ZP_05578409.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|227074501|gb|EEI12464.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|256954521|gb|EEU71153.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256992078|gb|EEU79380.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
          Length = 470

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 249/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 462

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 181/483 (37%), Positives = 265/483 (54%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++   F  I+ + + +YVCG TVYD+ H+G+AR +++FDV+ R LR ++   
Sbjct: 2   LKIYNTLSKQKEIFHPINNNKVGIYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHFSN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA      +   + I  +T++      +D   L  L P  +PR
Sbjct: 61  -VEYVRNITDIDDKIIKRA------VENKEDIYTLTNRFINAMHEDEHALGILPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN + Q+  +I+++I  G AY+A N ++ +      NYG FSR+ +++ ++G R+  + 
Sbjct: 114 ATNTMEQIFCMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKFSRKNLNKLEIGARIKVES 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK S P EP W SPWG+GRPGWHIECSAMS+H+LG  FDIHGGG+DL FP
Sbjct: 174 AKKDPLDFVLWKMSKPNEPSWSSPWGKGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      NIW+H GF+N+  +KMSKS  NF TI  +L       +++ 
Sbjct: 234 HHENEIAQSEGANNC-TFVNIWMHVGFVNINNKKMSKSLNNFFTIRNVL-------KNYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------IIDPA 350
             ++R  ++ +HY  P++F+ + L +A+  LS+   T                       
Sbjct: 286 GEILRYFIMSSHYHSPLNFSDENLNKAKSSLSRLYTTIRGLNTSNVRTEEISIHFDYSVR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEV--CKEH 400
              AL +D NT  A+  L +LA+      +        L  +       +GI      + 
Sbjct: 346 FNEALDDDFNTPIALSVLFELAKIVNIQRENNTDQAKTLAQLLKKLGGYIGILQMNADKF 405

Query: 401 LNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           L + I      I   +  R      K F+ +DYIR +L     ILED  N       T W
Sbjct: 406 LKQGISLSDEQINIKITNRNKARINKDFTLSDYIRDELAKFDIILEDNIN------GTTW 459

Query: 458 KQK 460
           ++K
Sbjct: 460 RKK 462


>gi|299533876|ref|ZP_07047243.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718160|gb|EFI59150.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 461

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 253/478 (52%), Gaps = 44/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R +  F  ++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PT +
Sbjct: 61  K--VTYVRNITDIDDKIIKRA------VENGETIRSLTDRMIDALHQDADALGIERPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  
Sbjct: 113 PRATEYVPQMLGMIARLQDKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P DF+LWK +   EP    W+SP+G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 173 ADGKHDPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+N++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
            + + A  IR  ++ +HYR P++++   L +A   L +           +          
Sbjct: 286 -KEYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKRLYTALDLVTPAEVQIDWSNPYA 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGI------EVCKEH 400
               +A+  D  T  A+  L +LA E    K+ ++  +  A    LG+      +  +  
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGLLQAEPQKFLQAG 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                + AIE  +  R      K ++ AD IRK+L  +G +L+D          T W+
Sbjct: 405 AEGVDAAAIEAQIAARAEAKATKNWAEADRIRKELLDQGIVLKDSAA------GTTWE 456


>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257998|gb|EDS71964.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
           17244]
          Length = 468

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 173/483 (35%), Positives = 255/483 (52%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF  I+   + MYVCGPTVY+F HIGNARP I+FD L R L Y   + 
Sbjct: 1   MKLYNTLTRKKEEFVPINEGEVNMYVCGPTVYNFFHIGNARPFIIFDTLRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKII +A++EH           +  K  +++  D   L     T  PR
Sbjct: 60  -VNYVQNFTDIDDKIINKAKEEHT------TSKAVADKYIKEYFTDAKGLGIKEATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  I  +I LI ++  +G+AY  +  + +  S   +YG  S++ IDE   G RV     
Sbjct: 113 VSECIGDIIDLISDLEKNGYAYNVDGNVYYRVSKFKDYGKLSKKPIDELISGARVEVNDE 172

Query: 185 KKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           K++P DF LWK+     E  ++SPWG+GRPGWHIECSAMS  YLG   DIHGGG DLIFP
Sbjct: 173 KESPLDFALWKKQKEDSEIAFDSPWGKGRPGWHIECSAMSRKYLGSTIDIHGGGEDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+  +   + ++HNG++N+   KMSKS GNF  + ++        + + 
Sbjct: 233 HHENEIAQSEGANG-KDFVHYFVHNGYININNEKMSKSKGNFFMVRDI-------SKDFD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------- 342
             V+RL ML  HY+ P++F+   L + +  L++   T                       
Sbjct: 285 LEVVRLFMLSAHYKTPVNFSFDILKQTQSGLNRLYNTKENLLYLLDKAKDKDLKEDEKEF 344

Query: 343 --SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
             S         +A+ +D+NT +A+  ++ L+++   N               ++     
Sbjct: 345 INSLPKYREEFKNAMEDDINTANAVSTIYDLSKDINSNVNENSSKEMIMKSYEMYMELNG 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+ + KE  ++ +   I +L+++R    K K F+ AD IR  L  KG +LED +    
Sbjct: 405 VLGL-LTKEKEDEILEDEIIELIEKRQNARKNKDFALADKIRDDLLDKGIVLEDTREGVK 463

Query: 451 GQR 453
             +
Sbjct: 464 WHK 466


>gi|254480424|ref|ZP_05093671.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214039007|gb|EEB79667.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 458

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 200/479 (41%), Positives = 279/479 (58%), Gaps = 44/479 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNT+     EF+ +    + MYVCGPTVY+ AHIGNARP++VFD L+RLL+  YG
Sbjct: 1   MSLKIYNTMSGAKEEFEPLVADTVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTQYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY RNITD+DDKII  A++       + +I  +T + T ++ +D  +L  L P+ +
Sbjct: 61  --SVTYARNITDVDDKIIAAAKE------GDRSIESVTDEYTAKYREDMAQLNALPPSLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT++I  MI L   +I  GHAYE+   ++F   S+ +YG  S R ID+   G RV   
Sbjct: 113 PHATHNIDAMIELTSTLIEKGHAYESQGHVLFAVESMEDYGKLSNRSIDDMLAGARVQVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK +   +PGW+SPWGRGRPGWH+ECSAM   +LG+  DIHGGG DLIF
Sbjct: 173 DYKRHPGDFVLWKPADITDPGWDSPWGRGRPGWHLECSAMIRAHLGETIDIHGGGRDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +     W+HN +L+++G KMSKS GNF T+ +LL       +S+
Sbjct: 233 PHHENEIAQSRCAHGGD-YVKYWMHNAYLDIDGEKMSKSLGNFRTVRDLL-------QSY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
              V+R A+L  HYR P++F+V+ L +A   L  +  T                D     
Sbjct: 285 RGEVLRFALLSAHYRSPLNFSVELLEQARSNLDGFYGTLREVADMEIDVDVPLADEPFYQ 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGI--EVCKEHLNK--- 403
           AL +DLNT  AI  LH LA++  K        L     A+ ++LGI  +  +E L     
Sbjct: 345 ALNDDLNTPLAIAELHALAKQLNKAAAEDKPQLKARIIAAGNLLGILGQDPEEWLQGDAA 404

Query: 404 ---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                + AIE L+QER+     + F+ AD IR  L ++G +LED +        T+WK+
Sbjct: 405 ADAISAEAIETLIQERVDAKANRNFARADEIRDSLLAEGVVLEDSR------EGTQWKR 457


>gi|254831936|ref|ZP_05236591.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 471

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG ++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGFKLENTQSDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|229550658|ref|ZP_04439383.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229304224|gb|EEN70220.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
          Length = 478

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITPPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------I 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|329897619|ref|ZP_08272161.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328921107|gb|EGG28515.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 457

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 201/478 (42%), Positives = 275/478 (57%), Gaps = 43/478 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL RK   F+   P  + MYVCGPTVY+ AHIGNARP++VFDVL+RLL+  Y 
Sbjct: 1   MDITLYNTLARKKERFEPRVPGEVTMYVCGPTVYNLAHIGNARPVVVFDVLFRLLQTQY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITDIDDKII  AR+        + I  +TS+ TQ+F +D   L  L PT +
Sbjct: 60  -QTVRYARNITDIDDKIITAARERA------EPIDAVTSEFTQKFREDVAALGTLPPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT+++  MI +++ ++   HAYEA+  ++F  +S+PNYG  S R +D+   G RV   
Sbjct: 113 PHATHNLGPMIAMVEALLAKNHAYEADGHVLFSVTSMPNYGELSGRNLDDMLAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK +   EPGWESPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIF
Sbjct: 173 DYKRHPGDFVLWKPAADDEPGWESPWGRGRPGWHLECSAMIHEHLGLEIDIHGGGRDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA         W+HN +++++G KMSKS GNF TI ELL         +
Sbjct: 233 PHHENEIAQSCCAYGGS-YVRYWMHNAYIDIDGEKMSKSLGNFKTIRELLGL-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLS 353
              V+R A+L  HYR  ++F+ + L ++E  L+           +D          +  +
Sbjct: 285 RGEVLRFALLSAHYRSSLNFSKELLDQSENALNGLYNALRKVESVDAVGPESVEQESWYA 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGI------EVCKEHLN 402
           AL +D+NT  AI  LH+L  E  K  D     +     A A +LGI      +  +   +
Sbjct: 345 ALCDDVNTPLAISELHQLISELNKADDSDKASIKGRILACASLLGILQSAPSDWLRGDDS 404

Query: 403 KNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + +S   I+ LV ER+     K ++ AD IR  L   G +LED          T W++
Sbjct: 405 EGLSAEAIDALVAERVEAKAAKNYARADEIRTVLTEAGVVLEDS------PSGTTWRR 456


>gi|315174139|gb|EFU18156.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 478

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 171/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------I 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           FN    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FNGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
 gi|166200146|sp|A5EWG6|SYC_DICNV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
          Length = 456

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 174/466 (37%), Positives = 252/466 (54%), Gaps = 35/466 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R+   F  I P+++ MYVCG TVYDF HIG+AR M+VFD + R LR    + 
Sbjct: 4   LHLYNSLSRQKEPFHPITPNHVMMYVCGMTVYDFCHIGHARVMVVFDTIARHLRASGYQ- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RA +       N+ I  +T +      +D   L CL P+ +P+
Sbjct: 63  -LTYVRNITDIDDKIIRRAAEN------NEPIQALTQRFINAMHEDEAALGCLPPSIEPK 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +MI +I  +I   HAY A+  ++ +   S   YG  + R++++ + G R+    
Sbjct: 116 ATEYVAEMIAMIGELIAQNHAYIADNGDVYYSVRSFDEYGKLANRRLEDLRAGERIAINE 175

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK++   EP WESPWG GRPGWHIECS MS H LG  FDIHGGG+DL FP
Sbjct: 176 AKNDPLDFVLWKKAKTGEPSWESPWGAGRPGWHIECSVMSRHQLGDHFDIHGGGMDLKFP 235

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EIAQS      +   N W+HNGF+N++  KMSKS GNF T+ ++L       +++ 
Sbjct: 236 HHECEIAQSEPVCGGKH-VNYWLHNGFINIDNEKMSKSLGNFFTVRDVL-------KNYA 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLSAL 355
             VIR  ML +HYR P++++   L EA+  L +      +                ++A+
Sbjct: 288 GEVIRFFMLQSHYRGPVNYSDAALEEAKRGLQRLYTALETAPTTGGAILLPYQERFVAAM 347

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI-----EVCKEHLNKNI 405
            +D NT  AI  L +LA+   K                A  LG+     +   +      
Sbjct: 348 DDDFNTPQAIAVLFELAKMLNKAAAAEAADIAFTLRTLAARLGLLTGDAKTLFQQKGALS 407

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +  IE  +  R      K +++AD IR++L + G  L+D       
Sbjct: 408 AAEIEAEIARRQAAKAAKDYATADSIREKLSALGIELKDSATGTQW 453


>gi|260495810|ref|ZP_05815931.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260196657|gb|EEW94183.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 472

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 184/492 (37%), Positives = 271/492 (55%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRDYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT++L        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           RAT++I +MI +IQ +I  G+AYE+N ++ F+ +   + YG  S++ I++ + G R+   
Sbjct: 114 RATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++ + G KMSKS G+FI + ++L       + +
Sbjct: 234 PHHENEMAQSKCACGG-TFARYWMHNGYIKINGEKMSKS-GSFILLRDIL-------KHF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIRL +L +HYR+P+DF+ + L + +  L +   T      +D              
Sbjct: 285 EGRVIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQELL 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
                     + A+  D NT  A+  + +L +   K  D   I   S             
Sbjct: 345 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKKSLEVIDEVYSYLVM 404

Query: 390 ---HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 405 IIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 464

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 465 KDK------TTW 470


>gi|256618484|ref|ZP_05475330.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256598011|gb|EEU17187.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
          Length = 470

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKTFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|325685668|gb|EGD27750.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 474

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 173/496 (34%), Positives = 257/496 (51%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E         +  +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARAE------GTTVPELAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSKENLEQAANILGRFKNTLEGINYRLADETEGLPD 344

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
           P              +A+ +D N  +A+ A+++       N +                 
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K       N    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGNDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
                   + TRW ++
Sbjct: 465 T------PQGTRWSRE 474


>gi|159029961|emb|CAO90340.1| cysS [Microcystis aeruginosa PCC 7806]
          Length = 480

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/499 (33%), Positives = 254/499 (50%), Gaps = 62/499 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  + P  + MY CG TVYD+ H+G+AR  +V+DV+ R L Y   
Sbjct: 1   MTLILYNTLSRREEPFTPLIPGIVSMYCCGITVYDYCHLGHARTCVVWDVVRRYLEYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y++N TDIDDKI+ RA+ EH        ++ +  K  Q + +D  +L        
Sbjct: 61  K--VRYIQNFTDIDDKILNRAKNEHT------TMAAVAEKFIQAYFEDMAKLGVRPADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG------ 176
           PRAT+ +  +  L+  +   G+AY ++ ++ +      +YG  S RK+D+ + G      
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYPSDGDVYYSVRRFSDYGKLSGRKLDDLQAGASGRVE 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           T  PE   K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 TDDPEAIKKQDPFDFALWKGAKPGEPSWDSPWGQGRPGWHIECSAMVKEQLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A+ W+HNG + + G KMSKS GNFITI ELL    
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLAHYWLHNGMVKVAGEKMSKSLGNFITIRELLA--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STS 343
                +    +RL +L   YR+PIDF+ + L  A        +              + +
Sbjct: 289 ----KYDPLAVRLLILGAQYRKPIDFSDEGLQAATNGWHTLQEGLSFGYKHLPPDNPAIT 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------IFN 386
              ++     A+ +D N    +  L ++A+E  K  + L                     
Sbjct: 345 DQELENRFQEAVNHDFNFAGGLAVLFEIAKELRKEGNNLTHAGKTDSNLAQLAVKWHTLV 404

Query: 387 ASAHILGIEVCKEHLNKNIS-----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             + +LG+E+  +     +S       IE L+Q+R    K K ++ +D IR +L+++G  
Sbjct: 405 KLSRVLGLEIAADQGETPVSEGISAAEIENLIQQRTEAKKAKNYAESDRIRAELKAQGIT 464

Query: 442 LEDYKNPDNGQRMTRWKQK 460
           L D         +T+W ++
Sbjct: 465 LIDQPGG-----VTKWLRE 478


>gi|257417468|ref|ZP_05594462.1| cysteinyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|300862011|ref|ZP_07108091.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|257159296|gb|EEU89256.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
 gi|295112378|emb|CBL31015.1| cysteinyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|300848536|gb|EFK76293.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 470

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 249/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|289433593|ref|YP_003463465.1| hypothetical protein lse_0224 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169837|emb|CBH26375.1| cysS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 471

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 171/485 (35%), Positives = 250/485 (51%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIKAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S + + E + G RV     
Sbjct: 115 VTENMDEIIQLINTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DLIFPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +    
Sbjct: 235 HEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDNDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------PQT 340
            VIR  ML  HYR+PI      L +A+  L +                          + 
Sbjct: 287 NVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQDEW 346

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
                 +  A    + +D NT +AI   H+LA+ +               + L +    A
Sbjct: 347 LEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRLFA 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+++            +E L++ERL     + F+ AD IR  L+ K  ILED     
Sbjct: 407 EVLGLKLEYTQTESLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGT 466

Query: 450 NGQRM 454
             +R 
Sbjct: 467 RFRRG 471


>gi|313620930|gb|EFR92103.1| cysteinyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 471

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     +  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  A  W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ERL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKDIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|312903154|ref|ZP_07762335.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|310633545|gb|EFQ16828.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315163378|gb|EFU07395.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578631|gb|EFU90822.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 478

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|238855655|ref|ZP_04645955.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664903|ref|ZP_05865754.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282933604|ref|ZP_06338973.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238831721|gb|EEQ24058.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561386|gb|EEX27359.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281302259|gb|EFA94492.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 473

 Score =  550 bits (1418), Expect = e-154,   Method: Composition-based stats.
 Identities = 174/494 (35%), Positives = 249/494 (50%), Gaps = 61/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 1   MKIYNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E         +  +  +    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAE------GITVPELAKRYINAFMEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G AYE + ++ +       YG  S + I   + G        
Sbjct: 113 ATEEIKDIIAFIKTLIEKGFAYEVDGDVYYRAKKFTGYGKLSDQDIASLEEGASQHVNEA 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF LWK+     E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EFAKKEDPIDFALWKKQKQSDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  + +KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKDEQKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR+PI+++ + L +A I+L K   T                 
Sbjct: 287 --KRVDPQVLRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLKETNSQENQ 344

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
             + +    +     A+ +D N  +A+  ++ L     KN              L     
Sbjct: 345 DLTIAIEDSENRFKEAMDDDFNVQNALSVVYDLLPVINKNISEDTSDLSALRKFLQHLEK 404

Query: 388 SAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
              I G+++ K    K  +    IE+LV++R    K K F+++D IR QL     IL+D 
Sbjct: 405 WLAIFGVDIDKLTTEKVSDDDAEIEELVKKRDEARKNKDFATSDTIRDQLAEMNIILQDT 464

Query: 446 KNPDNGQRMTRWKQ 459
                  + T+W++
Sbjct: 465 ------PKGTKWRR 472


>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 481

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/500 (33%), Positives = 246/500 (49%), Gaps = 64/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++IK+YNTL+R+   F+ I+   +++YVCG T Y+  HIGNARP + +D++ R L Y   
Sbjct: 2   EEIKVYNTLKREKQIFKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +++N TD+DDKII +A  E            ++++    + K    L        
Sbjct: 62  --HVDFIQNFTDVDDKIINKANAEKSDW------KTVSTRYIDAYFKVMDALHIRRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  + H+  +I +++ +I  GHAY   N++ +D S+  +Y   S RK+++   G RV   
Sbjct: 114 PYVSKHMEDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK + P EP WESPWG GRPGWHIECS MS+HYLG  FD HGGG DLIF
Sbjct: 174 TAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +     W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGATGQK-FVKYWLHNGFITINSEKMSKSLNNFFLVKDVLE-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------- 348
               +R  +L THYR P+DF+ +RL EAE  +SK          ++              
Sbjct: 286 SGDALRYFLLSTHYRSPLDFSDERLEEAEKNMSKLKDVIARIKEMEKEDGKVETNESVSL 345

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNH---------------DLLPIF 385
                        A+ +D NT  A   L    ++    +               +    F
Sbjct: 346 KKAAARTIEEFRQAMNDDFNTGLATGVLFDFVKDINIYYNAVNSGVAIEKEAVIEAKETF 405

Query: 386 NASAHILGIEVCKEHLNK-----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                ILGI   + +  +     +    +E ++  R    K K++  AD IR +L   G 
Sbjct: 406 KTILDILGILESEWNTQESYAGSDYDALMEMILSVRETARKEKQYKLADEIRDKLAELGI 465

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
           I+ED           RWK++
Sbjct: 466 IVEDSAT------GARWKKR 479


>gi|307708306|ref|ZP_07644773.1| cysteinyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615752|gb|EFN94958.1| cysteinyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 447

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/468 (35%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSAKSGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L       ++
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------KN 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +AE  L     T          +          
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVNAQELQAFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +     A   + GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD+IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFATADHIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|218245339|ref|YP_002370710.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226735051|sp|B7JUH4|SYC_CYAP8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218165817|gb|ACK64554.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 484

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/504 (33%), Positives = 255/504 (50%), Gaps = 68/504 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+    + ++   IRMY CG TVYD+ H+G+AR  +V+DV+ R L++   
Sbjct: 1   MTLTVYNTLTRRKEPLETLETGKIRMYCCGITVYDYCHLGHARTCMVWDVVRRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y++N TDIDDKI+ RARQE         +  ++ +  + + +D   L        
Sbjct: 61  E--VQYIQNFTDIDDKILNRARQE------GTTMEAVSDRFIEAYFEDMEHLHVQKADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----- 177
           PRAT+ +  +  L+  +   G+AY++N ++ +      +YG  S RK+++ + G      
Sbjct: 113 PRATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRKLEDLQAGASGRVE 172

Query: 178 -RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            + PE   KK+P DF +WK + P EP W+SPWG+GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 VQDPEAAKKKDPFDFAVWKAAKPGEPSWDSPWGQGRPGWHIECSAMVRERLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A  W+HNG + +EG KMSKS GNFITI +LL+   
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVEGEKMSKSLGNFITIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
                     +RL +L  HYR+P+DFT + L  A        +                 
Sbjct: 289 ----KVDPMAMRLFILQAHYRKPVDFTDEALEAATNGWHTLKEGLLFGYNHGKQLNFTAS 344

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
                +   +      A+ +D N    +  L ++A+E  K  ++L               
Sbjct: 345 PPHPLTSSPLTQRFQQAVDDDFNFAGGLAILFEIAKELRKEGNILVHQGQTETSPQVLEE 404

Query: 383 --PIFNASAHILGIEVCKEHLNKNI-----SIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   A +LG+E     + + +        IE+L+++R I  + K ++  D +R +L
Sbjct: 405 QWRTLVELAGVLGLETDISEVQEAVGNGLSDAEIEELIEQRKIARQNKNYAEGDRLRDEL 464

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           +++G IL D         +T W +
Sbjct: 465 KNQGIILVDQPGG-----ITTWHR 483


>gi|306832715|ref|ZP_07465852.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425171|gb|EFM28300.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 448

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 163/470 (34%), Positives = 249/470 (52%), Gaps = 39/470 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y   
Sbjct: 1   MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+ N TD+DDKII+ A +      +       + K    F++D  +L     T  
Sbjct: 61  K--VNYISNFTDVDDKIIKGAAE------VGMDTKAFSDKFIAAFMEDVKQLGVKPATKN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---V 179
           PR  +++ ++I  ++ ++  G AYEAN ++ F  +   NY   + + + + ++G      
Sbjct: 113 PRVIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVD 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG D
Sbjct: 173 GEGEIKENPLDFALWKSAKPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L       
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
           ++    V+R  +    YR+P++FT + + +A + L     T          +        
Sbjct: 285 KNVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
              +A+ +D NT + I  +  +A+       N  +   F     + GI   +E L+ +  
Sbjct: 345 DFEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEEVLDAD-- 402

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE L+++R      K F++AD IR QL ++G  L D K+   G R TR
Sbjct: 403 --IEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTKD---GVRWTR 447


>gi|322386163|ref|ZP_08059796.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269743|gb|EFX52670.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 447

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/468 (36%), Positives = 243/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITSQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVEFMGDIIRFVEDLIDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +A   L     T          S          
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVYDAATNLKYLKNTYEQPFTGQAESAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+          +         + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAKVKAALAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|312901251|ref|ZP_07760534.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|311291628|gb|EFQ70184.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
          Length = 478

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +D   L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDAQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|78048109|ref|YP_364284.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|109894961|sp|Q3BSH9|SYC_XANC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78036539|emb|CAJ24230.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 476

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 197/496 (39%), Positives = 267/496 (53%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I  GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDLAVSMT 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHI-------------- 391
               V SAL +DLNT  A+  +  +A ++     DL+    ASA +              
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAG 405

Query: 392 --LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             LG+             +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|218961048|ref|YP_001740823.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167729705|emb|CAO80617.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 469

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 184/488 (37%), Positives = 260/488 (53%), Gaps = 54/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  RK  EFQ I P  + +Y CGPTVY++ HIGNAR  I FDV+ R   Y   E 
Sbjct: 1   MLLYNTQTRKKEEFQPITPGKVGIYACGPTVYNYFHIGNARAFIFFDVVRRYFTYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+NITDIDDKII +A +E      N + +++  K T+ F+ DT+ L    PT+QP+
Sbjct: 60  -VTYVQNITDIDDKIIAQANEE------NISFTLVAEKYTRAFLDDTSALGIKPPTYQPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +  +I  I  +   G+AYE   ++ F T ++P+YG  S +K +EQ  G RV E Y+
Sbjct: 113 ATEVMDDIIAFIAELEKKGYAYEVEGDVYFATENLPSYGCLSGKKTEEQLAGARVMENYN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++PADF LWK+  P EP WESPWG+GRPGWH EC  MS  YLG+ FDIH GG+DLIFPH
Sbjct: 173 KRHPADFTLWKKGKPGEPVWESPWGKGRPGWHTECVVMSQKYLGETFDIHCGGIDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQ+      +  AN W+HNGFLN++G KMSKS  NF T  ++L         + A
Sbjct: 233 HENELAQAMAYSG-KPLANYWMHNGFLNVDGEKMSKSLKNFFTARDILA-------EYDA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------------TSTSK 344
             IR   L  HYR PIDF+ + + E++  ++                        T+   
Sbjct: 285 ESIRFFFLSKHYRSPIDFSRELMEESQRAVANLYSSLAEINYPENAENRRPTVCGTAQEL 344

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARES-TKNHDLLPIFNA------SAHILG-IEV 396
             ++   + A+ +D NT  AI  L +L R+    +  +    +A         +LG  + 
Sbjct: 345 QNLEQEFILAMDDDFNTAKAISLLFELNRKVKNTSATMADRISAAIKMVELGSVLGFFQN 404

Query: 397 CKEHLNKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            +  L + +    + L+      R      K ++ AD IR  L   G  ++D        
Sbjct: 405 LEAKLKQKMPDLSKDLICLILSYRKEARDKKDWALADKIRNDLAQLGIEIKDT------P 458

Query: 453 RMTRWKQK 460
              +W  K
Sbjct: 459 EGVKWTLK 466


>gi|171058353|ref|YP_001790702.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170775798|gb|ACB33937.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 457

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 180/476 (37%), Positives = 252/476 (52%), Gaps = 45/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+N+L R++  F++I+P ++RMYVCG T+YD  HIG+AR M+ FDV+YR LR      
Sbjct: 1   MRIHNSLSRELETFKSIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVYRWLRASG--W 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA      +     I  +T +      +D   L    PTH+PR
Sbjct: 59  RVTYVRNITDIDDKIIRRA------VERGITIRQLTDEMIDAMHRDIGALGIERPTHEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I  +   G AY + N ++ +       YG  S + +D+ + G RV    
Sbjct: 113 ATEYIPQMLSMISTLESKGLAYRSGNGDVNYAVRRFEGYGKLSGKSLDQLRAGERVAVAD 172

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    ++SP+G GRPGWHIECSAMS   LG+ FDIHGGGLDL
Sbjct: 173 GKEDPLDFVLWKSAKPQEPDDAKYDSPYGPGRPGWHIECSAMSCALLGETFDIHGGGLDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A         W+HNGFLN++  KMSKS GNF TI ++L       +
Sbjct: 233 QFPHHENEIAQSEGALG-HSWVPTWMHNGFLNVDNEKMSKSLGNFFTIRDVL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----------P 349
           S+    +R  ML   YR P +F+   L +A   L++         + D            
Sbjct: 285 SYDGETVRFFMLRVQYRSPFNFSDAGLDDARSSLTRLYTALDGVAVDDASEIDWTHPAAA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIE------VCKEHL 401
              +A+ +D NT  A+  L  LA E  +N D     +      +LG+         +   
Sbjct: 345 RFKAAMDDDFNTPIAVSVLFDLAGEVNRNKDAGTAGLLKRLGAVLGVLQQSPRTFLQGDT 404

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                  I++ + ER      + F+ AD IR  L ++G  L+D        + T W
Sbjct: 405 GGLDEAHIQQQIGERQAAKAARNFAEADRIRLALAAQGITLKDT------PQGTTW 454


>gi|22536391|ref|NP_687242.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|77405339|ref|ZP_00782434.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|30316157|sp|Q8E1Z4|SYC_STRA5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|22533218|gb|AAM99114.1|AE014201_12 cysteinyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|77176017|gb|EAO78791.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 447

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 165/468 (35%), Positives = 247/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D   L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKGAAE------AGMDTKSFSDKFISAFMEDVAALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G       E
Sbjct: 114 VIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT++++L       +S
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------KS 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               VIR  +    YR+P++FT + + +AE+ L     T                   A 
Sbjct: 286 VDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  + ++A+     H    +   F     I GI   +E L+ +    
Sbjct: 346 QGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEIFGIVFQEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+++R      + F++AD IR +L  +G  L D K+   G R TR
Sbjct: 402 IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKD---GVRWTR 446


>gi|313625379|gb|EFR95169.1| cysteinyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 471

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 249/487 (51%), Gaps = 51/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EIAQS  A   +  A  W+HN FLN++G KMSKS GNFIT++++L       +  
Sbjct: 233 PHHEDEIAQSEAATG-KTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------P 338
              VIR  ML  HYR+PI      L +A+  L +                          
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
           +       +  A    + +D NT +AI   H+LA+ +               + L +   
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRL 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A +LG+++     +      +E L++ RL     + F+ AD IR  L+ K  ILED   
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEARLQARNERNFARADEIRDILKEKDIILEDTAQ 464

Query: 448 PDNGQRM 454
               +R 
Sbjct: 465 GTRFRRG 471


>gi|289168428|ref|YP_003446697.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907995|emb|CBJ22835.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 447

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/468 (36%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++ +I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEELIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKLGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQAFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         + GI   +E L+ +    
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|307276290|ref|ZP_07557417.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|306507033|gb|EFM76176.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315149012|gb|EFT93028.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4244]
 gi|315168265|gb|EFU12282.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1341]
          Length = 478

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 251/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVADRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|104774470|ref|YP_619450.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
 gi|123077205|sp|Q1G8Z0|SYC_LACDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|103423551|emb|CAI98469.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC 11842]
          Length = 474

 Score =  550 bits (1417), Expect = e-154,   Method: Composition-based stats.
 Identities = 171/496 (34%), Positives = 256/496 (51%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E         +  +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEAGAE------GTTVPELAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ + T    +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRTKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  N +T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNCVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
           P              +A+ +D N  +A+ A+++       N +                 
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K       +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
                   + TRW ++
Sbjct: 465 T------PQGTRWSRE 474


>gi|294338858|emb|CAZ87192.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Thiomonas sp. 3As]
          Length = 460

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 188/476 (39%), Positives = 266/476 (55%), Gaps = 43/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R    F  I+P ++RMYVCG TVYD+ HIG+AR M+VFD+L R L+      
Sbjct: 4   LHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQGL-- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA+         + I  +T +      +D   L    PTH+PR
Sbjct: 62  RVTYVRNITDIDDKIIRRAQDN------GETIRALTDRFIAAMHEDADALGVERPTHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM+ LI  +   G AY ++  ++ F   + P YG  S + +DE + G RV    
Sbjct: 116 ATDYVPQMLDLIGKLKTRGLAYRDSAGDVNFHVRAFPGYGKLSGKSLDELRAGERVEVDT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    W S  G GRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A   +  AN+W+HNGF+ ++G KMSKS GNF TI ++L       +
Sbjct: 236 QFPHHENEIAQSEGASG-KPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDIL-------Q 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PA 350
              A  +RL ++  HYR P++++ + L +A   L++          +            A
Sbjct: 288 HVDAETVRLFIVRAHYRSPLNYSDEHLQDAHAALTRLYTALDPFAELPARLDWSHPRAQA 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI------EVCKEHLN 402
             +A+ +DLNT  A+  L +LA E  K  + DL  +      +LG+      E  +    
Sbjct: 348 FAAAMNDDLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKAA 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +E+LVQ R+   + + F+ AD IR +L +KG +LED         +T W+
Sbjct: 408 AVDAAWVEQLVQARIAAKQARNFAEADRIRAELSAKGIVLEDKPGG-----ITVWR 458


>gi|306830478|ref|ZP_07463648.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427503|gb|EFM30605.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 448

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 163/470 (34%), Positives = 248/470 (52%), Gaps = 39/470 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y   
Sbjct: 1   MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+ N TD+DDKII+ A +              + K    F++D  +L     T  
Sbjct: 61  K--VNYISNFTDVDDKIIKGAAE------AGMDTKAFSDKFIAAFMEDVKQLGVKPATKN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---V 179
           PR  +++ ++I  ++ ++  G AYEAN ++ F  +   NY   + + + + ++G      
Sbjct: 113 PRVIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVD 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG D
Sbjct: 173 GEGEIKENPLDFALWKSAKPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L       
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
           ++    V+R  +    YR+P++FT + + +A + L     T          +        
Sbjct: 285 KNVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
              +A+ +D NT + I  +  +A+       N  +   F     + GI   +E L+ +  
Sbjct: 345 DFEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEEVLDAD-- 402

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE L+++R      K F++AD IR QL ++G  L D K+   G R TR
Sbjct: 403 --IEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTKD---GVRWTR 447


>gi|297587609|ref|ZP_06946253.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
 gi|297574298|gb|EFH93018.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
          Length = 462

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 250/478 (52%), Gaps = 47/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V +V N TDIDDKII +A+ E      +     IT K  Q ++ + + L      T  P
Sbjct: 59  NVKFVSNFTDIDDKIINKAKDE------DIDFREITKKYIQAYLDNVSGLNFDEEDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172

Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK+     EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS         AN W+HN  + ++  KMSKS  NF  + ++        + +
Sbjct: 233 PHHENEIAQSETCTGAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIID--- 348
              VIRL +L  HYR PIDF+   L   +  L +              +S  +G  D   
Sbjct: 285 DLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLERLYTAKKFLNRILENSSEKEGSDDNIQ 344

Query: 349 ---PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGIE 395
                   A+ +D+NT  AI  L    +   KN+D             + +  +++LGI 
Sbjct: 345 SFREKFEQAMDDDINTSDAISVLFDFIKYINKNYDENTSKNILTEAKKLMDDISYVLGIL 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             +E  + ++   IE L+++R    K K F  AD IR +L S G +L+D ++    +R
Sbjct: 405 FKEE--DDDLDSEIEDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 460


>gi|226944443|ref|YP_002799516.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511824|sp|C1DHE6|SYC_AZOVD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226719370|gb|ACO78541.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 461

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 184/480 (38%), Positives = 262/480 (54%), Gaps = 46/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IY+TL +    F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+   
Sbjct: 1   MTLSIYSTLSKGKEAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVSRWLRHSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA +        ++   +  +      +D  RL  L P  +
Sbjct: 61  D--VTYVRNITDIDDKIIRRANEN------GESFQDLVGRMIAAMHEDEARLNVLRPDSE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+HI  M  +I+ +I   +AY   N ++ +       YG  SRRKI++ K+G R+  
Sbjct: 113 PRATDHIAGMHAMIRTLIDKSYAYAPGNGDVYYRVGKFEGYGKLSRRKIEDLKIGARIEP 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL+
Sbjct: 173 GEAKEDPLDFVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   ++ ANIW+H G + ++G KMSKS GNF TI E+LE        
Sbjct: 233 FPHHENEIAQSEAATG-KRYANIWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLS 353
           +   V+R  ++ +HYR PI+++   L EA   L ++           P           +
Sbjct: 285 YHPEVVRYLLVSSHYRSPINYSEDSLREARAALERFYNALKGLPAAQPTGGDEYVARFNA 344

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           A+ +D NT  A   L +LARE    ++ DL    + +A +  +      L       ++ 
Sbjct: 345 AMNDDFNTPEACAVLFELAREVNRLRDTDLQSAASLAARLKELGGLLGVLQLEPEAFLQA 404

Query: 412 LVQERLILLKM-------------KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +R+   ++             K ++ +D IR QL + G +LED KN       T W+
Sbjct: 405 GAADRVDAAEVEALIAARLAARAGKNWAESDRIRDQLAAMGVLLEDGKN------GTTWR 458


>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 468

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 178/487 (36%), Positives = 240/487 (49%), Gaps = 60/487 (12%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + ++  EF+ +    IRMYVCGPTVYD+ H+G+AR  I FDV+ R L +      V  V 
Sbjct: 1   MTKQKEEFKPLRDDEIRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGY--TVLMVM 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TDIDDKII RA +        +    +  K  + F++D   L        PR T HI 
Sbjct: 59  NFTDIDDKIIRRANE------TGEDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQ 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            +I  ++ +   G+AY +++ + F+      YG  S+  +++ + G RV     KKNP D
Sbjct: 113 DIIEFVRKLEEKGYAYGSSDGVYFEVRKYEKYGKLSKVNLEDLRKGVRVEPGEGKKNPED 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPHHENEIA
Sbjct: 173 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 232

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+      E     W H GF+ + G KMSKS GNF+TI ELL       + +   VIR  
Sbjct: 233 QTEACTGKE-WVKYWFHTGFVMVSGEKMSKSLGNFVTIRELL-------QRYSPEVIRFF 284

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------------- 351
           +L  HYR P+D+T + +  A+  L +   T  +  I    V                   
Sbjct: 285 VLQKHYRSPLDYTEEGIQHAKNNLERLYNTIENIRIAMEKVEVPFKWEKEEFELYETIRD 344

Query: 352 -----LSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILGI 394
                  A+ +D NT  A++ + ++A                     L  F   + + GI
Sbjct: 345 AKKKLYEAMDDDFNTAEAMKPIFEVANAVNAYLTKVEKPKESVLRKALEFFRIISEVFGI 404

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  KE         IE L++ R  L K K F  AD IR QL   G  LED        
Sbjct: 405 FEEYFKEAKETKEEELIELLIEVRSALRKQKNFELADKIRAQLRELGIQLEDT------P 458

Query: 453 RMTRWKQ 459
           + T WK+
Sbjct: 459 QGTIWKR 465


>gi|307268962|ref|ZP_07550326.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|307287137|ref|ZP_07567208.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306501735|gb|EFM71026.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306514770|gb|EFM83321.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315033512|gb|EFT45444.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315036335|gb|EFT48267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315165683|gb|EFU09700.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|329576209|gb|EGG57727.1| cysteine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 478

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 251/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVADRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|324996026|gb|EGC27937.1| cysteine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 447

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPKEVADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            SA+  D N  + I  + +LA+          +   F     + GI   +E L+ +    
Sbjct: 346 TSAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQMARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|229547086|ref|ZP_04435811.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|312952479|ref|ZP_07771347.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|229307815|gb|EEN73802.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|310629575|gb|EFQ12858.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|315153507|gb|EFT97523.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315155078|gb|EFT99094.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315158521|gb|EFU02538.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 478

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 251/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVADRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|163791190|ref|ZP_02185607.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873521|gb|EDP67608.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 468

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/491 (34%), Positives = 248/491 (50%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   F  I+   +RMYVCGPTVY++ HIGNAR  + FD + R L Y   + 
Sbjct: 2   LKIYNTLTRKKEAFIPIEEGKVRMYVCGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII  A++      +N     +  K    + +DT  L     +H PR
Sbjct: 61  -VNYVSNFTDVDDKIIRTAKE------LNLTAPEVADKFIAAYHEDTHALGVEEASHHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
              ++P +I  I  +I   +AYE + ++ + T    NYG  S   IDE ++G        
Sbjct: 114 VMENMPDIIDFIAVLIEKEYAYEVDGDVYYRTRKFKNYGELSDISIDELEVGASNRLNAQ 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   E  WESPWG GRPGWHIECS M++ YLG   DIH GG DL
Sbjct: 174 ENNKKEDPLDFALWKAAKEAEINWESPWGPGRPGWHIECSVMATKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS         A+ W+HNGF+ ++  KMSKS GNF+ +++++       +
Sbjct: 234 AFPHHENEIAQSEAKTG-HPFAHYWMHNGFVTMDNEKMSKSLGNFVLVHDII-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA 350
                ++R  M  T YR PI ++   + EA   L+K            + + + G  D  
Sbjct: 286 QVDPQILRFFMATTQYRRPISYSETTIEEARANLTKITMAFDNVTYRLKDAAAVGEDDQE 345

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                       ++ + +D N+ + I  ++++A+      +           +L  F   
Sbjct: 346 QISQFKLFKENFVTEMDDDFNSANGITVIYEMAKAMNIYSERTVVSKVVLEAMLHQFQEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             + GI   +  L   +   IE+L++ER      K F  +D IR QL+ +G IL+D    
Sbjct: 406 VQVFGITFGETEL---LDETIEQLIEERNAARAAKNFQRSDDIRDQLKEEGIILDDT--- 459

Query: 449 DNGQRMTRWKQ 459
               + TRW++
Sbjct: 460 ---PQGTRWRR 467


>gi|282899565|ref|ZP_06307529.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281195444|gb|EFA70377.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 488

 Score =  549 bits (1416), Expect = e-154,   Method: Composition-based stats.
 Identities = 180/506 (35%), Positives = 256/506 (50%), Gaps = 69/506 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R+  EF+ ++P  +RMY CG TVYD+ H+G+AR  IV+DV+ R L +   
Sbjct: 1   MTLSIYNTLTRRQEEFKPVEPGQVRMYYCGVTVYDYCHLGHARACIVWDVVRRYLEFIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y++N TDIDDKI+ RAR+E      N  +  +  +  Q + +D  RL        
Sbjct: 61  --RVRYIQNFTDIDDKILNRARKE------NSTMETVAERYIQAYFEDMGRLGVREADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
           PRAT+ +  +  LIQ++ + G+AY A+ ++ +       YG  S RK+ + + G      
Sbjct: 113 PRATHTMNGIKRLIQDLEVRGYAYPADGDVYYAVRKFNEYGKLSGRKLADLQAGASERVN 172

Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE   KK+P DF LWK + P EP WESPWG+GRPGWHIECSAM    LG   DIH G
Sbjct: 173 IEDPEYQKKKDPFDFALWKAAKPCEPAWESPWGKGRPGWHIECSAMVRDRLGDTIDIHAG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS      +  AN W+HNG + ++G KMSKS GNF TI +LL+   
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------Q 339
              R      +RL +LM  YR+P+DFT + +  A                         Q
Sbjct: 289 ---RGVDPMALRLFVLMAQYRKPLDFTEEAILAATNGWHTLKEGLLFGYHHGAKLDWDLQ 345

Query: 340 TSTSKGIID----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
           ++     ID        +A+ +D N    +  + ++A+E  K  +++             
Sbjct: 346 SAKDNTNIDQVEIEKFTTAVDDDFNFPGGLAVIFEIAKELRKEGNIIVHEGKTQTPCAKL 405

Query: 383 ----PIFNASAHILGIEVCKEH----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                       +LG+    E             IE LVQ+R    K K F+ +D IR++
Sbjct: 406 LTKWQTLVTLTSVLGLIAKPEEQKTIDESLSDKVIENLVQKRQEARKAKDFAESDRIREE 465

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L++KG  L D K        TRW+++
Sbjct: 466 LKAKGITLIDSK------EGTRWQRE 485


>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 481

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 179/501 (35%), Positives = 254/501 (50%), Gaps = 67/501 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL +K  EF+ +D   +++Y CGPTVYD+ HIGNAR  I+ D+L R L Y   
Sbjct: 1   MTLQIYNTLTQKKEEFEPLDQDEVKLYSCGPTVYDYFHIGNARAFILPDILKRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V N TD+DDK+I+RA +E   I        +  +    + +DT RL        
Sbjct: 61  N--VLHVTNFTDVDDKMIKRANEEEIEIEE------LADRFITAYFEDTERLNIKQADVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  +I L++ +   G+AYE + ++ F      +YG  S ++++E   G+RV   
Sbjct: 113 PKATEHISDIIELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF+LWK+S   EP WESPWG GRPGWHIECSAMS  YLG+ FD H GG+DL+F
Sbjct: 173 DKKEDPLDFVLWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+       +  N W+HNG++N++G KMSKS GNF T  ++L       + +
Sbjct: 233 PHHENEIAQNEAGVG-SQVVNYWLHNGYINVDGEKMSKSLGNFFTTRDIL-------QDY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
            A V+R  ++  HYR PI+F+   L  A   L +   T      +               
Sbjct: 285 SAEVLRFFLISKHYRSPINFSDAELDNAAKSLQRLQNTVNKLKDLLDRDRADLKPGNKEE 344

Query: 348 -----------DPAVLSALYNDLNTVSAIQALHKLARESTK----------------NHD 380
                            A+ +DLNT  AI ALH+LA+E                      
Sbjct: 345 LQELEKKIKAKREKFEEAMDDDLNTALAIGALHELAKELNIVVNDADFELNQANIIVLEK 404

Query: 381 LLPIFNASA-HILGIEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               F   +  +LGI +  E    +   S  I  L++ R    + + +  AD IR +L  
Sbjct: 405 AYDTFKELSQQVLGINLETEDDISDNLTSDLIGLLLEVRNKARQNQDWELADQIRDELSE 464

Query: 438 KGFILEDYKNPDNGQRMTRWK 458
            G ILED        + T WK
Sbjct: 465 LGIILEDT------PQGTDWK 479


>gi|291333822|gb|ADD93505.1| cysteinyl tRNA synthetase [uncultured marine bacterium
           MedDCM-OCT-S04-C13]
          Length = 458

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 189/478 (39%), Positives = 264/478 (55%), Gaps = 42/478 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN+L +    F  +DP  + MYVCGPTVY+F HIGNARP +VFD L+R+L+  Y 
Sbjct: 1   MSLVLYNSLTKAKQPFVPLDPERVTMYVCGPTVYNFVHIGNARPAVVFDTLFRVLQRLY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RNITDIDDKI+  A +      + + IS ++++  Q +  D + L CL P+  
Sbjct: 60  -PQVVYARNITDIDDKIMNTAAE------LGEDISQLSTRFAQAYFDDMSALNCLEPSIV 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT HIP+MI ++Q ++  GHAY A   ++F   S+ +YG+ S R +++   G RV   
Sbjct: 113 PYATAHIPEMISMVQRLVDKGHAYVAEGNVLFAVESMADYGALSGRSLEDMMAGARVEIA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+   DF+LWK ST  EPGW+SPWGRGRPGWH+ECSAM   +LG   DIH GG DLIF
Sbjct: 173 SYKRYAGDFVLWKPSTDHEPGWDSPWGRGRPGWHLECSAMIEKHLGVTIDIHAGGQDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA   +  AN W+HNGF+N++G KMSKS GNF  +N+LL       + +
Sbjct: 233 PHHENEIAQSCCAHDGQPFANYWLHNGFINIDGEKMSKSLGNFRMVNDLL-------KQY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------LSALY 356
           P  V+R  +L +HYR   +F    L  A   L             +  +        AL 
Sbjct: 286 PGEVLRYVILSSHYRSEQNFGKDLLDSAWRSLDSLYGYLRGLPETEAVIDRDSISFKALL 345

Query: 357 NDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVC----------KEHL 401
           +DLNT  AI  L++LA+E     D     L       A ++G+                 
Sbjct: 346 DDLNTPVAISELYRLAKEMHTASDSEKAALHSELMGLAELMGLLQQDPEQWFKQSRDGEA 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  IE+L+ +R      K ++ AD +R+QL  +G +LED +        T W++
Sbjct: 406 ESISEAEIERLIAKRQQAKADKDYAGADQVREQLLEQGVVLEDSR------EGTSWRR 457


>gi|83592028|ref|YP_425780.1| cysteinyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|109894932|sp|Q2RWK2|SYC_RHORT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83574942|gb|ABC21493.1| cysteinyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 459

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 200/480 (41%), Positives = 267/480 (55%), Gaps = 45/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + I+NT+ R    F+ +DP ++R+YVCGPTVYD AHIGNARP+IVFD+L         
Sbjct: 1   MTLHIHNTMTRTKEVFEPLDPGHVRLYVCGPTVYDRAHIGNARPVIVFDLLA--RLLRRL 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI  RA            I  IT + T+ F +D   L  L P  +
Sbjct: 59  YPQVTYVRNITDVDDKINARASAS------GRTIGEITEETTRLFHEDMAELGALPPDVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  M+ +I+ +I  GHAYEA   ++F   S+  YGS S R +D+   G RV   
Sbjct: 113 PRATAHIADMVAMIERLIAKGHAYEAEGHVLFSVPSMGAYGSLSGRSMDDMIAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++PADF+LWK S    PGW+SPWGRGRPGWHIECSAMSS YLG  FDIHGGGLDLIF
Sbjct: 173 PYKRDPADFVLWKPSDASLPGWDSPWGRGRPGWHIECSAMSSRYLGPSFDIHGGGLDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C +     A  W+HNG+L +EG KMSKS GNF+T+ +LL+         
Sbjct: 233 PHHENEIAQSVCCNGPGTFARYWMHNGYLMVEGEKMSKSLGNFVTVRDLLD-------QA 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPAVLSAL 355
           P   +RLAML THYR+P D+T + L +A   L +           + S   +   V++AL
Sbjct: 286 PGEAMRLAMLGTHYRQPFDWTAEGLEQARRGLDRLYSALRRVAGIAASPAEVPEGVMAAL 345

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASAHILGIEVCKE 399
            +DLNT  A+  ++ L     +                       F A   +  +     
Sbjct: 346 CDDLNTPKALAEVYDLLGVLNRATTTEEQAKAKGALLAAGALLGLFQADPEV-WLCGAGT 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
              + ++  +E L+ +R    + + F+ AD IR +L   G +LED      G   T W++
Sbjct: 405 GEEEGLAARVEDLICQRKAARQARDFARADAIRDELTQAGIVLED------GPNGTTWRK 458


>gi|319939876|ref|ZP_08014231.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810887|gb|EFW07206.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 447

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/471 (35%), Positives = 246/471 (52%), Gaps = 42/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLRKFVPLEEGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPKEVADKYIAAFREDVTTLGVQPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++  +I  +Q ++  G AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVDYMMDIIDFVQVLVDKGFAYESEGDVYFRVEKSSNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TTRKENPVDFALWKAAKPGEIFWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +AE+ L     T      G +D           
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAEVNLKYLKNTYEQPFTGTVDLTELQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + ++A+     H   ++   F     + GI    E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFEMAKWINSGHYSQEVKTAFAELLQVFGIVFTAEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IE L+++R      K F++AD IR +L +KG  L D K+        RW +
Sbjct: 402 IEALIEQRQAARVAKDFATADKIRDELAAKGIKLLDTKD------GVRWIR 446


>gi|300769737|ref|ZP_07079619.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300492645|gb|EFK27831.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 506

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 175/484 (36%), Positives = 252/484 (52%), Gaps = 53/484 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +   + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y 
Sbjct: 34  VANMLSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYC 93

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T
Sbjct: 94  GY--HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPAT 145

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PRA+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G    
Sbjct: 146 VHPRASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQH 205

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E   K++P DF LWK + P E  WESPWG GRPGWHIECS MS+ YLG  FDIHGG
Sbjct: 206 TADEETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGG 265

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
           G DL FPHHENEIAQS      +  AN W+HNGF+ +  +  KMSKS GNF+T++++++T
Sbjct: 266 GQDLEFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKT 324

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGI 346
                      V+R  M  T YR PI +T   L EA   L K              +   
Sbjct: 325 V-------DPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNG 377

Query: 347 IDPAVLS-----------ALYNDLNTVSAIQALHKLARESTKNH-----------DLLPI 384
            D AV             A+ +D N  + + A+++LA+ +                L   
Sbjct: 378 TDTAVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQEA 437

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 + G+     +       AI+ L+ ER    K K F+ AD IR  L+++G ILED
Sbjct: 438 LVQLTGVFGVTFETANAT-LADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILED 496

Query: 445 YKNP 448
               
Sbjct: 497 TPQG 500


>gi|315143639|gb|EFT87655.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 478

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 494

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 174/509 (34%), Positives = 265/509 (52%), Gaps = 75/509 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I I+NT   +  +   ++  +++MYVCG T YD+ HIG+AR ++VFD++YR L++   
Sbjct: 1   MPILIHNTKTARKEKLAPLEEGHVKMYVCGITAYDYCHIGHARSVLVFDMIYRYLQHRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+VRN TDIDDKII+RA+++          + ++ +   +F +D T L  L PT +
Sbjct: 61  --RVTFVRNFTDIDDKIIKRAQEQ------GTTCTELSQRFIAKFHEDMTALNTLPPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+P+MI +I+ ++    AYEA  ++ +       YG  S R +++ + G RV   
Sbjct: 113 PLATEHLPEMIAMIEELVAKDLAYEAQGDVYYRVQRFAGYGVLSGRGLEDMQAGARVAVN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM   YLG+ FDIHGGG DL+F
Sbjct: 173 DNKEHPMDFVLWKASKPGEPAWDSPWGPGRPGWHIECSAMGKKYLGETFDIHGGGKDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  AN+W+H+GF+ ++  KMSKS GNF+TI E+LE         
Sbjct: 233 PHHENEIAQSEGASG-KSFANLWVHHGFVTIKDEKMSKSLGNFLTIREVLERH------- 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
           PA  +RL +  THYR P+D++   L +AE  L++      +                   
Sbjct: 285 PAEALRLFVFSTHYRNPLDYSETALQDAEAALTRIYSALAATAQLPGAAGDPSPSASVVG 344

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
                    ++ +   A+  D N+  A+  +    +   K    L               
Sbjct: 345 EKDRDKLAKLEQSFHQAMDIDFNSALALGRIFDAIKIINKVRQALPANPAPQDLQLLQQT 404

Query: 383 -PIFNASAHILG---------IEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSAD 429
                    + G         +E  ++ L   +S     IE L+++R    + K ++ AD
Sbjct: 405 AATIRDLTAVFGLAQEEPVSWLEKRQQRLLAQLSIKPAEIEALLEQREQARRDKDWAEAD 464

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            IR QL  +  +++D      G   T+W+
Sbjct: 465 RIRDQLLQQRIVIKD------GPDGTKWE 487


>gi|327533897|gb|AEA92731.1| cysteine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 478

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILTFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|170733433|ref|YP_001765380.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|229558621|sp|B1JUK8|SYC_BURCC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169816675|gb|ACA91258.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 465

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 178/484 (36%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D T L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDETALGIQRPDVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      +YG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   EP    W S +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKRAKEDEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLALDWNEPHG 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGGLAADEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|59712207|ref|YP_204983.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|71657967|sp|Q5E4F1|SYC_VIBF1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|59480308|gb|AAW86095.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 461

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 173/482 (35%), Positives = 254/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +       D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAEN------GETCDALTERLIADMHADFDALNMKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--PE 181
           AT +I ++I L++ +I  G AY A N +++F+      YG  SR+ +++ + G+RV   E
Sbjct: 114 ATEYIKEIIALVERLIERGFAYVASNGDVMFEVKKYDEYGCLSRQDLEQLQAGSRVTLEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+
Sbjct: 174 ASVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLM 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L         
Sbjct: 234 FPHHENEIAQSCCAHDT-PYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------H 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
           + +  +R  ++  HYR  ++++ + L +A   L +            T            
Sbjct: 286 YDSETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLSVTPAGGEEFVGRFS 345

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A   L ++ARE  +           L  +    A +LG+         +
Sbjct: 346 TAMNDDFNTPEAYSVLFEMAREVNRLKTENIDTASKLGALMRELADVLGLLSQEPEAFLQ 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L++ R      K +++AD  R  + +   +LED      G   T W+
Sbjct: 406 GGSSNDDVAEIEALIKARNDARAAKDWAAADAARDAIAALNIVLED------GPEGTTWR 459

Query: 459 QK 460
           +K
Sbjct: 460 RK 461


>gi|332526279|ref|ZP_08402408.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332110113|gb|EGJ10741.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 457

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 255/478 (53%), Gaps = 43/478 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++NTL R++  F  ++P  +RMYVCG TVYD  H+G+AR  + FDV+YR L+    
Sbjct: 1   MTLRLHNTLTRRLETFVPLEPGRVRMYVCGITVYDLCHMGHARMNLAFDVVYRWLKASGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRNITDIDDKII RA +    I        +T +      +D   L    PTH+
Sbjct: 61  E--VTYVRNITDIDDKIIRRALERGVGI------RALTDEMVAAMHRDFAALGLEPPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  +PQM+ +I  +  +G AY A + ++ F     P YG  S + +DE + G RV  
Sbjct: 113 PRATEFVPQMLDIIGRLERNGLAYRAEDGDVNFAVRRFPGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FD+HGGG+
Sbjct: 173 AGGKEDPLDFVLWKSAKPEEPAEAKWDSPFGAGRPGWHIECSAMSCALLGERFDLHGGGM 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A       N W+HNGFLN++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGAFG-HPFVNYWLHNGFLNVDNEKMSKSLGNFFTIADVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------D 348
            + +    +R  ML THYR P +F    L EA   L +          +           
Sbjct: 286 -KKFDGETVRFFMLRTHYRSPFNFADSLLDEARAALRRLYTALDGADAVACEVDWSDPRA 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGI-----EVCKEHL 401
            A  +A+ +D NT  A+  L +LA E  ++ D     +  +   +LGI         +  
Sbjct: 345 AAFKAAMDDDFNTPGALAVLFELANEFNRSRDAAMARLLVSLGAVLGILQQAPRAFLQAG 404

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                  I + ++ R    + ++F+ AD IR +L ++G  L+D        + T W +
Sbjct: 405 TGVDDAEIARQIEARATAKRERRFADADRIRAELAAQGVELKDT------PQGTTWVR 456


>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|229558630|sp|B1I0T1|SYC_DESAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 478

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 174/499 (34%), Positives = 247/499 (49%), Gaps = 66/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL  +   F   DP  + +YVCGPT Y+F H+GNAR ++VFD + R   + Y   
Sbjct: 1   MQIFNTLTGRKETFCPRDPGRVSIYVCGPTTYNFIHLGNARALVVFDTIRRY--FLYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII R+R+E            + +K   ++  D   L        P+
Sbjct: 59  RVLYIQNFTDVDDKIINRSREE------GIDPQTLAAKYVDEYFVDADALNVRRADVHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HIP++I LI  II  G AY A  ++ F       YG  S+R +D+   G RV     
Sbjct: 113 VSDHIPEIIALITMIIDRGLAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEVGEQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWGRGRPGWHIECSAM+  YLG  FDIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKAAKPGEPWWESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   E  A  WIHNGF+ +   KMSKS GN   + EL        R +P 
Sbjct: 233 HENEIAQSEGATG-EPFARYWIHNGFITIREEKMSKSLGNVFLVREL-------TRLYPP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------------QTS 341
             +RL +L  HYR P+D+  + +  +   +++                         +  
Sbjct: 285 EALRLFLLSNHYRNPLDYDPEAMEASVRAVNRLKTCLGLLRESLDRPAPDGDGGGGNRLE 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
               ++     +A+ +D NT  A   +  L  E                   L +F+A  
Sbjct: 345 AVLEVLQGRFEAAMDDDFNTALAQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFN 404

Query: 390 HILGIEV--------CKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            +LGI              ++ ++S   ++ L+  R    + K F++AD IR  L + G 
Sbjct: 405 RVLGIFPEHKGRIVLEAGAVSGDLSQGLLDLLIALRQDARRNKDFATADRIRDGLRALGI 464

Query: 441 ILEDYKNPDNGQRMTRWKQ 459
           +LED        +  RWK+
Sbjct: 465 LLEDT------PQGVRWKK 477


>gi|329999154|ref|ZP_08303351.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328538407|gb|EGF64532.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 444

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/442 (37%), Positives = 238/442 (53%), Gaps = 42/442 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  KD   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHKDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A+  +++FD  + PNYG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  IR  ++  HYR  ++++ + L +A   L +             +      +   + A
Sbjct: 286 AETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIEA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
           + +D NT  A   L  +ARE  +           +       A +LG+   +        
Sbjct: 346 MDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQSG 405

Query: 402 ---NKNISIAIEKLVQERLILL 420
              +      IE L+Q+RL   
Sbjct: 406 AQVDDAEVAEIESLIQQRLDAR 427


>gi|324992446|gb|EGC24367.1| cysteine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|327462791|gb|EGF09113.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 447

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/468 (36%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVCRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +A   L     T          S          
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQAESAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+     +   ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTSEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|269837621|ref|YP_003319849.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269786884|gb|ACZ39027.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 468

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 179/489 (36%), Positives = 245/489 (50%), Gaps = 52/489 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ +T   +   F+ I+P  +RMYVCGPTVYD AHIG+A   IVFDVL R L Y   
Sbjct: 1   MTLRLTDTRTGEQRPFEPIEPGVVRMYVCGPTVYDDAHIGHAMSAIVFDVLRRYLEYSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V + +N TD+DDKII+RA        +      +  +  + +++DT RL     T  
Sbjct: 61  --RVIHAQNFTDVDDKIIQRAAT------LGIEPRELAERLIEDWLRDTARLNVKPATIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  I  +I +I+ +I  GHAY     ++ F   S P YG  S R +DE   G R+  
Sbjct: 113 PRATQEIDTIIEMIKGLIAEGHAYAVEGGDVFFRVDSFPGYGKLSHRSLDEMMAGARIEV 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P EP W+SPWG GRPGWHIECSAM   +LG   DIHGGG DLI
Sbjct: 173 DPRKENPMDFALWKGAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGDRIDIHGGGADLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS      E  A  W+HNG L L G KMSKS GN ITI ELLE        
Sbjct: 233 FPHHENEIAQSEAFTDQEPLARFWVHNGLLQLGGEKMSKSLGNLITIRELLERG------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
                 R  +L +HYR P+ F+ + +  A   L++                         
Sbjct: 287 -DGEAFRFLVLSSHYRSPLTFSDEAMDSARRGLARLQSAVRGFDPATAPATAPDHALARI 345

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHILG 393
                    +A+ +DLNT  A+  L +LAR   +  D             +    A +LG
Sbjct: 346 ADETRAEFRAAMDDDLNTPVALSHLFELARAINRERDAGAPAAAVAYAQSVLKELAGVLG 405

Query: 394 --IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             +E   +  ++ I   ++ L++ R  L K + +  AD IR +L   G  +ED       
Sbjct: 406 LTLETTTQRTDEAIEPFVDLLLEVRAELRKQRLWDLADRIRVRLGELGIRVEDT------ 459

Query: 452 QRMTRWKQK 460
            + + W+++
Sbjct: 460 AQGSTWRRE 468


>gi|76787565|ref|YP_328938.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77410936|ref|ZP_00787292.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|109894950|sp|Q3K3G5|SYC_STRA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|76562622|gb|ABA45206.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77162991|gb|EAO73946.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 447

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 164/468 (35%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D   L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKGAAE------AGMDTKSFSDKFISAFMEDVAALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G       E
Sbjct: 114 VIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++   G   DIHGGG DL 
Sbjct: 174 GEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEIFGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT++++L       +S
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------KS 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               VIR  +    YR+P++FT + + +AE+ L     T                   A 
Sbjct: 286 VDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  + ++A+     H    +   F     I GI   +E L+ +    
Sbjct: 346 QGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEIFGIVFQEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+++R      + F++AD IR +L  +G  L D K+   G R TR
Sbjct: 402 IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKD---GVRWTR 446


>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 459

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 183/480 (38%), Positives = 262/480 (54%), Gaps = 48/480 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN++ R+  +F  I P  +++YVCG TVYD+ H+G+AR ++VFD + R       + 
Sbjct: 2   LKIYNSIAREKQDFVPITPGKVKLYVCGMTVYDYCHLGHARVLVVFDTVVRWFEA--NDF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA++       N++I  +T +  Q   +D+  L   +PTH+P 
Sbjct: 60  TVNYVRNITDIDDKIIKRAQEN------NESIEALTQRFIQAMNEDSVALGVSSPTHEPC 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+H+  MI +I  ++    AY+A N ++ F   + P YG  S + +++ + G RV    
Sbjct: 114 ATHHVKSMIGMISTLVEKNLAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGERVDIDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP WESPWG GRPGWHIECSAM   +LG+ FDIHGGG DL FP
Sbjct: 174 SKKDPLDFVLWKSAKSGEPFWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF T+ E+L       + + 
Sbjct: 234 HHENEIAQSEGAH-DHPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREIL-------KLYQ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----------VL 352
             V+R  +L  HYR P++++ Q L + ++ L +          I  A             
Sbjct: 286 PEVVRFFILRAHYRSPLNYSDQHLKDTKLALDRLYIALKEVEPISVARVDWNYPYAQKFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------------HILGIEVCKE 399
            A+ +D NT  AI  L  LA +  K           A               L  +    
Sbjct: 346 RAMDDDFNTPDAIALLFDLASDINKTGSREHAGLLKALGGLLGLLQQNPQEYLQNKAASS 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            LN +    +E+L+QER+   K  ++S AD IRKQL+ +G ILED        + T W++
Sbjct: 406 ELNSSAHD-VEQLIQERINARKEGRYSDADTIRKQLQEQGIILEDS------SQGTTWRR 458


>gi|160947200|ref|ZP_02094367.1| hypothetical protein PEPMIC_01133 [Parvimonas micra ATCC 33270]
 gi|158446334|gb|EDP23329.1| hypothetical protein PEPMIC_01133 [Parvimonas micra ATCC 33270]
          Length = 461

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 180/479 (37%), Positives = 258/479 (53%), Gaps = 47/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK  +F+ I      +YVCGPTVY++ HIGN+RPMIV+D L R L Y   + 
Sbjct: 1   MKIYNTLTRKKEDFKPIQAGKALIYVCGPTVYNYIHIGNSRPMIVYDTLRRYLLYIGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V +V N TDIDDKII RA++E      N   + IT K    +++D+  L    + T  P
Sbjct: 60  -VKFVSNFTDIDDKIINRAKEE------NVPFTDITKKYIDAYLEDSYGLNLFESHTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT  I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATECINEMIEFVKVLEEKGIAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDISD 172

Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK+     EP WESPWG GRPGWH+ECS M+  YLG   DIH GG DL F
Sbjct: 173 EKKNPLDFALWKKRKDETEPAWESPWGMGRPGWHLECSVMAKKYLGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C +  +  AN W+HNG +N++  KMSKS GNF TI ++        + +
Sbjct: 233 PHHENEIAQSECCNG-KVFANYWMHNGMINIDNVKMSKSKGNFFTIKDI-------QKEY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
              VIRL +L THYR P++F+ + + + +  L +                          
Sbjct: 285 DLEVIRLWILSTHYRNPLNFSREVMEQTKNGLDRMYNGKEHLERLLEICEEKEDGDISKL 344

Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE 395
             +    L  + +DLNT  AI  +++L R +    +          + + +  A +LG+ 
Sbjct: 345 VELKKEFLDCMDDDLNTADAISKVYELIRYTNTFGENTDLKVVKGAVKLLSDFASVLGLL 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
             +E  + N+   +EKL++ER    K K F  AD IR  L+     L+D +N    +R+
Sbjct: 405 YKEE--DDNLDEKVEKLIKEREEARKNKDFKRADEIRDALKEMNIELKDTRNGVIWKRV 461


>gi|227545183|ref|ZP_03975232.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300909140|ref|ZP_07126601.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227184829|gb|EEI64900.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300893005|gb|EFK86364.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 478

 Score =  549 bits (1415), Expect = e-154,   Method: Composition-based stats.
 Identities = 166/492 (33%), Positives = 257/492 (52%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 10  LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYK- 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K    F++DT  +     T  PR
Sbjct: 69  -VNYVSNFTDVDDKMIKAAAEQ------GITVPQLAEKYINAFMEDTAAINIEPATLHPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I ++I  +Q ++  G+AY  + ++ + +    +YG  S + +D+ ++G        
Sbjct: 122 ATENITEIIKFVQGLVEKGYAYPKDGDVYYRSRKFNHYGQLSGQSLDDLEVGASEHVSAD 181

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 182 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 241

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +     W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 242 EFPHHENEIAQSEAETGQK-FVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 295 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQIAFDNLTYREQDADEGDVQE 353

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
                       ++A+ +D+N  + I  +++L + +                +       
Sbjct: 354 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVEL 413

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G++  +   N+     I++L++ER I  K K F+ +D IR  L+ +G ILED    
Sbjct: 414 MSIFGVK-LEASDNQINDEKIKQLIEERNIARKNKDFARSDEIRDNLKKQGIILEDT--- 469

Query: 449 DNGQRMTRWKQK 460
               + TR+K++
Sbjct: 470 ---PQGTRYKKE 478


>gi|294624692|ref|ZP_06703360.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292601000|gb|EFF45069.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 476

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 197/496 (39%), Positives = 268/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALETESGGDVAISKT 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
               V SAL +DLNT  A+  +  +A ++                +  +  A A +LG  
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSELMHSGQASARMAQLQAARAKLLGAG 405

Query: 396 VCKEHLNKN------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           V    L ++                I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 VALGLLQQDPAAWFSRGTDVGDDARITALVEERSAAKKAKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|259047744|ref|ZP_05738145.1| cysteine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259035935|gb|EEW37190.1| cysteine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 469

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/490 (34%), Positives = 245/490 (50%), Gaps = 55/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL R+   F+ I+   +RMYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IQIYNTLTRQKEAFKPIEEGKVRMYVCGPTVYNYIHIGNARSTVSFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII  A +             ++ K  + F +DT  L     T  P 
Sbjct: 61  -VNFVSNFTDVDDKIIRVANE------TGMTAEEVSKKYIEAFFEDTNALNVKKATLNPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
             N +  +I  + ++I  G AYE+  ++ F T     YG  S ++I++ +MG        
Sbjct: 114 VMNTMDDIIAFVADLIDKGMAYESEGDVYFITEKFEGYGKLSDQRIEDLQMGASNRTASE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K+NP DF LWK + P E  W SPWG+GRPGWHIECS M++ +LG   DIHGGG DL
Sbjct: 174 DDAKKRNPLDFALWKNAKPNEISWNSPWGKGRPGWHIECSVMATKHLGDTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS      +K AN W+HN F+ +   KMSKS GNF+ +++L+       +
Sbjct: 234 AFPHHENEIAQSESKTG-KKFANYWMHNAFVTMGEEKMSKSLGNFVLVHDLI-------Q 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------- 344
                V+R  +   HYR P+ F+   L EA + L K   T  +                 
Sbjct: 286 QLDPQVLRFFLASAHYRRPLKFSEAALQEAAVNLEKVQTTFKNARYRLETAVDALPEDAE 345

Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHI 391
                  I+      + +D N  + +  L++  +E     +        L  +   +A +
Sbjct: 346 RLAKFAAIEADFQKEMDDDFNAANGMTVLYQWLKEWNVYLEQEVVSKAVLEALLEKAAVL 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            GI    E     +   I+ L++ERL   K K F+ +D IR  L+ +G +LED       
Sbjct: 406 FGIFGIVEKQEALLDDDIQALIEERLEARKAKNFARSDEIRDLLKEQGIVLEDT------ 459

Query: 452 QRMTRWKQKP 461
            + TRW+++ 
Sbjct: 460 PQGTRWRREA 469


>gi|116514575|ref|YP_813481.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
 gi|122274693|sp|Q048S9|SYC_LACDB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116093890|gb|ABJ59043.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
           bulgaricus ATCC BAA-365]
          Length = 474

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 171/496 (34%), Positives = 255/496 (51%), Gaps = 62/496 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E         +  +  +  Q F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEAGAE------GTTVPELAERYIQAFLEDTRALNIEEATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT+ IP +I  IQ +I  G+AYEA+ ++ +      +YG  S + ID+ + G        
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T+ ++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVYDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
             ++    V+R  M    YR  I+++ + L +A  +L ++  T           ++G+ D
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
           P              +A+ +D N  +A+ A+++       N +                 
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++V K       +    IE+LV +R    K K ++ +D +R QL+  G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464

Query: 445 YKNPDNGQRMTRWKQK 460
                   + TRW ++
Sbjct: 465 T------PQGTRWSRE 474


>gi|148543540|ref|YP_001270910.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184152946|ref|YP_001841287.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363504|ref|ZP_03847624.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|189082068|sp|A5VI99|SYC_LACRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558714|sp|B2G5S5|SYC_LACRJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148530574|gb|ABQ82573.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224290|dbj|BAG24807.1| cysteinyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071441|gb|EEI09744.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
          Length = 470

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/492 (33%), Positives = 256/492 (52%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K    F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAAEQ------GITVPQLAEKYINAFMEDTAAINIEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I ++I  +Q +I  G+AY  + ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 174 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +     W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 234 EFPHHENEIAQSEAETGQK-FVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 287 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQTAFDNLTYREQDADEGDVQE 345

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
                       ++A+ +D+N  + I  +++L + +                +       
Sbjct: 346 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G++  +   N+     I++L++ER I  K K F+ +D IR  L+ +G ILED    
Sbjct: 406 MSIFGVK-LEASDNQINDEKIKQLIEERNIARKNKDFARSDEIRDNLKKQGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TR+K++
Sbjct: 462 ---PQGTRYKKE 470


>gi|325926478|ref|ZP_08187798.1| cysteinyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325543127|gb|EGD14570.1| cysteinyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 476

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 197/496 (39%), Positives = 266/496 (53%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L    P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVAPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I  GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATTHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDPAVSMT 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHI-------------- 391
               V SAL +DLNT  A+  +  +A ++     DL+    ASA +              
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAG 405

Query: 392 --LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             LG+             +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|110834996|ref|YP_693855.1| cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123050340|sp|Q0VML5|SYC_ALCBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110648107|emb|CAL17583.1| Cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 460

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 212/482 (43%), Positives = 278/482 (57%), Gaps = 47/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL  K  +F  +DP+ I +YVCGPTVY+F HIGNARP++VFDVLYRLL+  Y 
Sbjct: 1   MTLRLQNTLTGKKDDFIPLDPNRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRLY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RNITDIDDKII+ A          +AIS +T + TQ F  D   L    P+  
Sbjct: 60  -PNVVYARNITDIDDKIIKAAADN------GEAISTLTERFTQAFADDMASLNAKTPSII 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT+HIP+MI +I  ++  GHAYEA+ +++F   S+P+YG  S RK+++   G RV   
Sbjct: 113 PKATDHIPEMIQMIAILVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDMLAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DFILWK ST  +PGW+SPWGRGRPGWHIECSAM   +LG V DIHGGG DLIF
Sbjct: 173 DYKRHPGDFILWKPSTDEQPGWDSPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ CCA   +     W+HNG++N++G KMSKS GNF  + +LL         +
Sbjct: 233 PHHENEIAQGCCAHGTD-YVRYWLHNGYINIDGEKMSKSLGNFRLVRDLLT-------QY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----------DPAV 351
               +R A+L +HYR P++F+   L  AE  L         +G             +  V
Sbjct: 285 HGETLRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLGRGETVAPEAGYQLPDNHPV 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHLNK 403
           L AL +DLNT  A+ ALH +A E  K            L        +L +E      NK
Sbjct: 345 LDALKDDLNTSEAVSALHAIAGELNKAELDDKPKLKAELLAAADLLGLLTVEPTAWFQNK 404

Query: 404 NISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           N+S       AI+ LV+ER    K K F+ AD IR+QL   G  LED +        TRW
Sbjct: 405 NVSEDGLSNDAIDALVEERTQAKKDKNFARADEIRQQLTKAGIQLEDTR------EGTRW 458

Query: 458 KQ 459
            +
Sbjct: 459 SR 460


>gi|268318912|ref|YP_003292568.1| hypothetical protein FI9785_418 [Lactobacillus johnsonii FI9785]
 gi|262397287|emb|CAX66301.1| cysS [Lactobacillus johnsonii FI9785]
          Length = 470

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/493 (34%), Positives = 251/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 1   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH        +  +  +  + F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARKEHT------TVEKLAERYIKAFMEDTEALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 113 ATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +     KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +     V+R  M    YR PI+++   L +AE +L ++  T  +              
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETILKRYQNTLRNLDARLNDENETLED 344

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
                         + A+ +D N  +A+  ++ LA     +                +  
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKLLI 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+   +E         IEKL+ +R    K K ++ +D +R +L++KG ++ED  
Sbjct: 405 AWLEIFGVSFKEEQAGN--DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIEDT- 461

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW +
Sbjct: 462 -----PQGTRWHR 469


>gi|221632709|ref|YP_002521930.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155785|gb|ACM04912.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 465

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 175/484 (36%), Positives = 243/484 (50%), Gaps = 49/484 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+  +F+ ++P ++RMYVCGPTVY  AHIG+A   IVFD++ R L Y   
Sbjct: 1   MTLRVTNTLTREKEQFETLEPGHVRMYVCGPTVYSDAHIGHAMSAIVFDMIRRYLEYSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+  N TDIDDKII+RA        +      +  +    ++ +T  L     T  
Sbjct: 61  --RVTFAMNFTDIDDKIIQRAAT------LGLPPHELAEQLIDAWLDETAALNIKPATIY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  IP +I +++ +++ GHAY  + ++ F   S P YG  S R ++E   G RV   
Sbjct: 113 PRATQEIPTIIEMVKGLLVKGHAYTIDGDVYFRVLSFPEYGKLSHRTLEEMLAGARVEID 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W+SPWG GRPGWHIECSAM   +LG+  DIHGGG DLIF
Sbjct: 173 PRKEHPMDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGEQIDIHGGGADLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +     W+HNG L L G KMSKS GN ITI ELL     G    
Sbjct: 233 PHHENEIAQSEAFTGKKPFVRYWLHNGLLQLGGEKMSKSIGNLITIRELLARNGAGP--- 289

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------QTSTSKG 345
                RL +L +HYR P+ FT +    A     +                   + +T   
Sbjct: 290 ----FRLLVLSSHYRSPLTFTEEAFEAATRGFDRLRLAVQGVEPAELPNRPEHELATLAD 345

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------SAHILGIE 395
               A   A+ +D +T  A+  L +LAR   +         A           A +LG  
Sbjct: 346 ATRLAFRQAMDDDFDTPVALARLFELARAINRARASGERLEAIRYAQFTLLELATVLGFR 405

Query: 396 VCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
             ++    ++    I+ L+  R  L   +++  ADYIR +L   G ++ED          
Sbjct: 406 FDEQSTGRQSAEPFIDLLLDVRARLRAQRQWELADYIRGRLNELGVLVEDT------PGG 459

Query: 455 TRWK 458
           T W+
Sbjct: 460 TTWR 463


>gi|223933939|ref|ZP_03625899.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897386|gb|EEF63787.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 447

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/468 (35%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+ N TD+DDKII+ A +             ++ K    F +D  +L     T  PR
Sbjct: 61  -VTYISNFTDVDDKIIKAANE------AGMTTKELSDKFIAAFREDVAKLGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G+AYEA+ ++ F      NY   + + + + + G       E
Sbjct: 114 VIDYMDEIIDFVQVLIDKGYAYEASGDVYFRVEKAENYARLANKTLSDLEAGASGRVEGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS C    +  AN W+HN  LN+   KMSKS GNF+T +++LE        
Sbjct: 234 FPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE-------Q 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID--------PAV 351
               V+R  +   HYR P+++T + +++AEI L     T T   +  +D         A 
Sbjct: 286 IDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I A+   A+       +  +   F     + GI   +E L+      
Sbjct: 346 EAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLEVFGIVFEEEVLDS----E 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IEALIAERQAARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|315612689|ref|ZP_07887601.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315276|gb|EFU63316.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 447

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 171/468 (36%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVADLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPDEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDTQELQAFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N+ + I  + ++A+       +  +         + GI   +E L+ +    
Sbjct: 346 VAAMDEDFNSANGITVVFEMAKWINSGNYDASVKQALADMLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|159905981|ref|YP_001549643.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|229558715|sp|A9AAN8|SYC_METM6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|159887474|gb|ABX02411.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 476

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 166/480 (34%), Positives = 238/480 (49%), Gaps = 54/480 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ ++   ++MYVCGPTVYD  H+G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKPLNEKEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA +   +         ++ +    F+ D T L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRANENGKN------PKELSEQFITVFLNDMTTLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I  I+ +I  G AYE  N + F+     NYG  S   +++   G R+     
Sbjct: 114 VTEHIPEIIAFIEKLIEKGFAYETENGVYFEVKKFENYGKLSNINLEDLFSGVRIETSEE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK + P EP W+SP+  GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNPEDFALWKTAKPGEPKWKSPFVEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI  +        + +  
Sbjct: 234 HENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEGI-------SKEYDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            ++R   +  HYR PID+T + +T  +  L K      +                     
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESITHVKNNLEKIYNVIENIRISLEKSEKSRVWGENEVLL 345

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------------FNAS 388
                        A+ +D NTV A++++ +++    K   L+              F   
Sbjct: 346 YDILKNSKRNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVKTPSEGLLLKAFDFFKIV 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     K     +    I+ L++ R  L   K +  +D IR  L++ G+ +ED  
Sbjct: 406 GEIFGLFENYFKTSSESDDEEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIEDNP 465


>gi|254555716|ref|YP_003062133.1| cysteine-tRNA ligase [Lactobacillus plantarum JDM1]
 gi|254044643|gb|ACT61436.1| cysteine-tRNA ligase [Lactobacillus plantarum JDM1]
          Length = 470

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 179/479 (37%), Positives = 258/479 (53%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   LSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYCGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T  PR
Sbjct: 60  HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPATVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           A+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G        
Sbjct: 114 ASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHTADE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  WESPWG GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +  AN W+HNGF+ +  +  KMSKS GNF+T++++++T    
Sbjct: 234 EFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGIIDPA 350
                  V+R  M  T YR PI +T   L EA   L K              +    D A
Sbjct: 290 ----DPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNGTDTA 345

Query: 351 VLS-----------ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHI 391
           V             A+ +D N  + + A+++LA+ +         +   L+ +  A   +
Sbjct: 346 VAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQKALVQL 405

Query: 392 LGI-EVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            G+  V  E  N  +   AI+ L+ ER    K K F+ AD IR  L+++G ILED    
Sbjct: 406 TGVFGVTFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILEDTPQG 464


>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166200137|sp|A4JFD0|SYC_BURVG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 465

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 176/484 (36%), Positives = 249/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKII RA      +   ++I  +T +       D   L    P  +
Sbjct: 62  --RVTYVRNITDVDDKIIRRA------VENGESIKSLTDRFIGAMHDDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEPYA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D+NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQG 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
               H     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 AGSAHAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|315923786|ref|ZP_07920016.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622906|gb|EFV02857.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 465

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 176/482 (36%), Positives = 261/482 (54%), Gaps = 51/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+ ++  EF  I+P  +RMY CGPTVY++ HIGNARP IVFDVL R L Y   + 
Sbjct: 1   MKLYNTMTQRKEEFVPIEPGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII R+ +E            I  K   ++ KD   L     T  PR
Sbjct: 60  -VTFVQNFTDVDDKIINRSHEE------GCTAKEIADKYIAEYFKDADALGIRRATVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++ +P++I +++ +   G AY     + +     P+YG  S + + + + G R+     
Sbjct: 113 VSDTMPEIIAMVKALEDRGLAYNVGGNVYYAVDRFPDYGKLSGQNVADLEAGARIDVNDE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K +P DF LWK++ P EP W+SPWGRGRPGWHIECSAMS  +LG+  DIHGGG DLIFPH
Sbjct: 173 KHSPLDFALWKKAKPGEPYWDSPWGRGRPGWHIECSAMSRKFLGETIDIHGGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  +   E  A  W+HNG++N+   KMSKS GNF T+ ++          +  
Sbjct: 233 HENEIAQSEGSCGCE-FARYWVHNGYININDEKMSKSKGNFFTVRDI-------AGKYDL 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIIDPA--- 350
            V+R+ MLM HYR P++F+ + L  A+  L ++                 K   D A   
Sbjct: 285 EVVRMFMLMAHYRSPVNFSDELLASAQNALERFYNAKNQMIYLADHAEDRKPSPDEAAWI 344

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
                     ++A+ +DLNT  AI A+ +L R +                L +F   A +
Sbjct: 345 QSLTQYKNGFIAAMNDDLNTADAIAAMFELVRAANTALSESSPKSAVTAALKLFRELAGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +G+   ++  + ++   +E L+ ER    + + F+ AD IR +L ++G +LED +     
Sbjct: 405 IGL--AEKEPDSHLESEVEALIAERQAARRARDFARADAIRDELAARGIVLEDTREGVKW 462

Query: 452 QR 453
            +
Sbjct: 463 HK 464


>gi|241662706|ref|YP_002981066.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240864733|gb|ACS62394.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 463

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 263/482 (54%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + +S +T +      +D   L    P ++
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETMSALTGRFIAAMHEDADALGVQRPDYE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLGMIGKLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG+ FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ +   KMSKS GNF TI ++L      
Sbjct: 234 DLQFPHHENEIAQSEGATG-KTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIID----- 348
            + + A V+R  +L +HYR  ++++   L +A   L++         + +    D     
Sbjct: 287 -KVYDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNESH 345

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEHL---- 401
               L A+ +D NT  A+  L +LA E  K    +L     A A +LG+     H     
Sbjct: 346 GKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVLGLLGRDPHAFLQG 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +   +  +E  ++ER      + F+ AD IR  L + G +LED         +T W
Sbjct: 406 GVSPDGLDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLEDKPGG-----VTEW 460

Query: 458 KQ 459
           ++
Sbjct: 461 RR 462


>gi|313639766|gb|EFS04515.1| cysteinyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 471

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 171/485 (35%), Positives = 250/485 (51%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIKAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S + + E + G RV     
Sbjct: 115 VTENMDEIIQLITTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DLIFPH
Sbjct: 175 KQDELDFTLWKAAKPDEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +    
Sbjct: 235 HEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDNDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------PQT 340
            VIR  ML  HYR+PI      L +A+  L +                          + 
Sbjct: 287 NVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQDEW 346

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
                 +  A    + +D NT +AI   H+LA+ +               + L +    A
Sbjct: 347 LEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRLFA 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+++            +E L++ERL     + F+ AD IR  L+ K  ILED     
Sbjct: 407 EVLGLKLEYTQTESLADSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGT 466

Query: 450 NGQRM 454
             +R 
Sbjct: 467 RFRRG 471


>gi|304405640|ref|ZP_07387299.1| cysteinyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304345679|gb|EFM11514.1| cysteinyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 477

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/495 (34%), Positives = 245/495 (49%), Gaps = 63/495 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNT+ R    F+   P  ++MYVCGPTVYD+ HIGNARP+I FDV+ R L     E  V
Sbjct: 5   IYNTMTRAQEAFKPQQPGQVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLEVTGYE--V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+ N TD+DDK+I +A Q      +   +  +       F +D   L     T  PR T
Sbjct: 63  NYIVNFTDVDDKLIRKAEQ------LGTTVPEVADTFIAAFNEDIEALGVHKATRNPRVT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           +HIP ++  IQ ++  G AYE+  ++ F T+    YG  S +  +E ++G R+     K+
Sbjct: 117 DHIPLIVSFIQGLVDKGIAYESAGDVYFRTNQFEAYGKLSHQNTEELQLGIRIEIDERKQ 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +  DF+LWK + P E  W SPWG GRPGWHIECSAM+  YLG   DIHGGG DL FPHHE
Sbjct: 177 HAQDFVLWKSAKPGEIHWSSPWGNGRPGWHIECSAMAREYLGDTLDIHGGGHDLQFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            E+AQS      +  AN W+HNG++++   KMSKS GN IT+ ELL+  K          
Sbjct: 237 CEVAQSESLTG-KPLANYWMHNGYVHINNEKMSKSLGNGITVRELLKRTK-------PQA 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------------TSTS 343
           IR  +L THYR P++F+   + +AE  + +                           ++ 
Sbjct: 289 IRYFVLATHYRSPLNFSDDTIAQAENSVERIVNCAGNLLHRLSVLGEKPLEPQQAVAASG 348

Query: 344 KGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF 385
              +D           + + +D NT  AI AL  L  E+                LL + 
Sbjct: 349 NDALDARLAAIAGQFAAKMNDDFNTPDAITALFDLVSEANGAMQRQDASAAELQALLALL 408

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                 LG+    +   + +   IEKL+ ER    + K ++ AD IR  L +   +LED 
Sbjct: 409 EQFDRTLGLLPRADEAGELLDEQIEKLIVERTEARQAKNWARADEIRDLLAADNIVLEDT 468

Query: 446 KNPDNGQRMTRWKQK 460
                  +  +W++K
Sbjct: 469 ------PQGIKWRRK 477


>gi|195978850|ref|YP_002124094.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|229558791|sp|B4U570|SYC_STREM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|195975555|gb|ACG63081.1| cysteinyl-tRNA synthetase CysS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 448

 Score =  549 bits (1414), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/471 (35%), Positives = 242/471 (51%), Gaps = 42/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 3   IKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTVRRYFEYAGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++         +   +  +    F++DT  L     T  PR
Sbjct: 61  TVNYISNFTDVDDKIIKAAKE------AGLSPKQLADQFIAAFMEDTKALGVKPATKNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  I  +I  G+AYE+  ++ F  +   NY   + + I + + G       E
Sbjct: 115 VMDYMDEIIAFIAALIKKGYAYESAGDVYFRVAKASNYARLANKTIADLEAGASGRTDTE 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W SPW  GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 175 TALKENPLDFALWKSAKPGEVSWTSPWSAGRPGWHIECSVMATELLGDTIDIHGGGADLE 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T+++LL+T       
Sbjct: 235 FPHHTNEIAQSEAKT-SKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTV------ 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
                +R  +   HYR+PI+FT + + +AE+ L     T          S+       A 
Sbjct: 288 -DGQTLRFFLATQHYRKPINFTEKAIHDAEVNLKYLKNTLQQPTVATADSSQLAAFVTAF 346

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D NT + I  L  +A+       +  +   F     + GI    E L+      
Sbjct: 347 KAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAESLD----TE 402

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IE+L+ ER      + F+ AD IR QL ++G  L D K+        RW +
Sbjct: 403 IEQLIAERQEARANRDFAKADAIRDQLAAQGIKLLDTKD------GVRWIR 447


>gi|169834403|ref|YP_001694075.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168996905|gb|ACA37517.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 457

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 12  IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 70

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 71  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 124 VVEFMDDIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 184 TARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 244 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 296 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 355

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 356 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 411

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 412 IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKD---GVRWTR 456


>gi|29374703|ref|NP_813855.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|61216301|sp|Q839V5|SYC_ENTFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29342161|gb|AAO79927.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
          Length = 470

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/492 (34%), Positives = 249/492 (50%), Gaps = 62/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---E 181
             +H+P ++  I+ +I  G AYE   ++ + T   PNYG  S + IDE ++G       E
Sbjct: 114 VMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +L +  DIHGGG DL 
Sbjct: 174 QQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLEETIDIHGGGQDLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     ++R  M  T YR PI ++   L EA     K                       
Sbjct: 286 QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPEDE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
                   ++   ++ + +D N  + I  +++LA+   +  +              +F+ 
Sbjct: 346 HYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFSG 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 406 WLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 460

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 461 ----PQGTRWRR 468


>gi|315171290|gb|EFU15307.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1342]
          Length = 478

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAKRFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|315151334|gb|EFT95350.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 478

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ H+GNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHLGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILTFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
                      ++   ++ + +D N  + I  +++LA+   +  +              +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           F+    I G+    E L   +   ++ L++ER    K + F+ +D IR  L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW++
Sbjct: 468 T------PQGTRWRR 476


>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 464

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 184/484 (38%), Positives = 259/484 (53%), Gaps = 49/484 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR M+VFDV+ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRHPGEVRMYVCGITVYDYCHVGHARMMVVFDVVQRWLRALGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +TS+      +D   L    P H+
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIGSLTSRFIAAMHEDLDALGVARPEHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ +PQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATDFVPQMLGMIETLEANGYAYQASDGDVNYAVRKFANYGRLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK + P EP    W+S +GRGRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLAR---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
              + A V+R  ++ THYR P++++   L +A   L++   T+      D A        
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSEVHLDDARASLTRLY-TALKDVTPDAAPLDRDEPH 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---------IEV 396
                +A+ +D NT  A+  L +LA E  +  +  L         +LG         ++ 
Sbjct: 345 ARRFAAAMNDDFNTALAVSVLFELAGEVNRTREPALARQLKQLGGLLGLLGREPRAYLQQ 404

Query: 397 CKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                +  +   AIE  +  R+   + K ++ AD IR  L   G  LED         +T
Sbjct: 405 ASGAASGALEAGAIEAQIAARVAAKQAKNYAEADRIRAALLEAGVALEDKPGG-----LT 459

Query: 456 RWKQ 459
            W++
Sbjct: 460 EWRR 463


>gi|308179697|ref|YP_003923825.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045188|gb|ADN97731.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 470

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 178/479 (37%), Positives = 258/479 (53%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   LSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYCGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T  PR
Sbjct: 60  HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPATVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           A+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G        
Sbjct: 114 ASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHTADE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETDRKEDPIDFALWKAAKPGEISWKSPWGAGRPGWHIECSVMSTKYLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +  AN W+HNGF+ +  +  KMSKS GNF+T++++++T    
Sbjct: 234 EFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGIIDPA 350
                  V+R  M  T YR PI +T   L EA   L K              +    D A
Sbjct: 290 ----DPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNGTDTA 345

Query: 351 VLS-----------ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHI 391
           V             A+ +D N  + + A+++LA+ +         +   L+ +  A   +
Sbjct: 346 VAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAQATVQKETLIALQKALVQL 405

Query: 392 LGI-EVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            G+  V  E  N  +   AI+ L+ ER    K K F+ AD IR  L+++G ILED    
Sbjct: 406 TGVFGVTFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILEDTPQG 464


>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 465

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 179/484 (36%), Positives = 250/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRRSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEQLESNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IID------ 348
              + A V+R  ++ THYR P++++   L +A   L++              +D      
Sbjct: 289 ---YDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWSEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  AI  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAARDGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|126658705|ref|ZP_01729850.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619967|gb|EAZ90691.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 482

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 175/492 (35%), Positives = 249/492 (50%), Gaps = 58/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNT  R++  F  + P  + MY CG TVYD+ H+G+AR  I++D++ R L++   
Sbjct: 1   MTLKIYNTQTRRLEPFITLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYV+N TDIDDKI+ RA+QE        ++  I+ +  + +  D   L  +     
Sbjct: 61  E--VTYVQNFTDIDDKILRRAQQE------GVSMVDISERFIEAYFTDIRPLNVMDADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PR T++I  +  LIQ ++   +AY  + ++ F   +   YG  S R     + G      
Sbjct: 113 PRVTDNISGIQQLIQVLLEKNYAYAVDGDVYFHVEAFGEYGKLSGRSQSMMQAGASGRVA 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P   HKK+P+DF LWK + P EP W SPWG GRPGWHIECSAM    LG+  DIHGG
Sbjct: 173 MSDPANSHKKHPSDFALWKSAKPEEPAWNSPWGEGRPGWHIECSAMVRGLLGETIDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS  A+  +  A  W+HNG + + G KMSKS GNF TI ELL    
Sbjct: 233 GGDLVFPHHENEIAQSEAANG-KPLAKYWVHNGMVTVNGEKMSKSLGNFTTIRELLN--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
              R     VIRL +L  HYR+P+DFT + ++ A                      W + 
Sbjct: 289 ---RPLDPMVIRLFVLQAHYRKPLDFTEEAISSATNGWQTLQQGLRFGEKYGNRLGWQKN 345

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
                 +     +A+ +D N+   +  L +LA+   +  +LL                  
Sbjct: 346 QELDSAVIEQFNAAMDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKTPTDSDNLQRQWQ 405

Query: 384 IFNASAHILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                A ILG+E       E         I +L+Q+R    K+K ++ +D IR+QL+ KG
Sbjct: 406 TLVHLAGILGLEAKPKANLEDTQNFDEAKITRLIQQRNAARKVKDYAQSDRIREQLQQKG 465

Query: 440 FILEDYKNPDNG 451
             L D+ N +  
Sbjct: 466 ITLIDHPNGETS 477


>gi|67922209|ref|ZP_00515723.1| Cysteinyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67855912|gb|EAM51157.1| Cysteinyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 482

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/492 (34%), Positives = 253/492 (51%), Gaps = 58/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNT  R++  F  + P  + MY CG TVYD+ H+G+AR  I++D++ R L++   
Sbjct: 1   MTLKIYNTQTRRLEPFVTLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLKWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYV+N TDIDDKI+ RA+++        +++ I+ +  + + +D   L  +     
Sbjct: 61  E--VTYVQNFTDIDDKILRRAQEQ------GVSMADISERFIEAYFEDIRPLNVMDADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PR T++I  +  LI+ ++   +AY A+ ++ F   +   YG  S R     + G      
Sbjct: 113 PRVTDNISGIQQLIEVLLEKNYAYAADGDVYFHVEAFEQYGKLSGRSQSMMQAGASGRVA 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P   HKK+P+DF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIHGG
Sbjct: 173 VSDPTNSHKKHPSDFALWKSAKPEEPAWDSPWGEGRPGWHIECSAMVRGLLGETIDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS  A+  +  A  W+HNG + + G KMSKS GNF TI ELL    
Sbjct: 233 GGDLVFPHHENEIAQSEAANG-KPLAKYWVHNGMVTVNGEKMSKSLGNFTTIRELLN--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
              R     VIRL +L  HYR+P+DFT + ++ A                      W + 
Sbjct: 289 ---RPLEPMVIRLFVLQAHYRKPLDFTEEAISSATNGWQTLQQGLLFGEKYGNRLGWEKN 345

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
                 +     + + +D N+   +  L +LA+   +  +LL                  
Sbjct: 346 QELDSAVIEQFKATVDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKITTDGEDLQRQWQ 405

Query: 384 IFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                A ILG+E   E  +++        I KL+Q+R    K+K ++ +D IR+QL+  G
Sbjct: 406 TLVHLAGILGLEAKSEVGSEDTNNFDQAEITKLIQQRNAARKVKDYAESDRIREQLQEMG 465

Query: 440 FILEDYKNPDNG 451
             L D  N +  
Sbjct: 466 ITLIDQPNGETS 477


>gi|50915009|ref|YP_060981.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|61216145|sp|Q5X9W5|SYC_STRP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50904083|gb|AAT87798.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 447

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 161/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIVFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|222152459|ref|YP_002561634.1| cysteinyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222113270|emb|CAR40797.1| cysteinyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 446

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/467 (35%), Positives = 248/467 (53%), Gaps = 38/467 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R++ +F+ I+ + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRQLRDFKPINDNQVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +             +  +    F++DT++L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAAAEN------GVTPKELADRFIAAFMEDTSKLGIKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  I  ++  G AY+   ++ F  +   NY   + + + + ++G       E
Sbjct: 114 VMDYMDEIIAFISVLMEKGFAYQVAGDVYFRVAKSENYARLANKTLADLEVGASGRTDSE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDLKENPLDFALWKSAKSGEISWESPWGPGRPGWHIECSVMATELLGHTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS         AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-HTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS------KWPQTSTSK---GIIDPAVL 352
               V+R  +    YR+PI+FT + + +AE+ L       + P   TS         A  
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTYRLPVAETSDLGYKTYIEAFK 345

Query: 353 SALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIAI 409
           +A+ +D N  + I  +   A+     H   ++   F     + GI   +E L+ +    I
Sbjct: 346 AAMDDDFNAANGITVVFDFAKWINSGHYSAEIKTAFEEMLAVFGIVFEEEVLDAD----I 401

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           E L+ ER      + F+ AD IR QL S+G  L D K+   G R TR
Sbjct: 402 EALIAERQEARAQRDFAKADQIRDQLASQGIKLLDTKD---GVRWTR 445


>gi|257875920|ref|ZP_05655573.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257810086|gb|EEV38906.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 470

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/494 (34%), Positives = 248/494 (50%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   FQ ++   ++MYVCGPTVY++ HIGN R  + FD + R   Y     
Sbjct: 2   IKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++      +      +  +    F +DT  L     T  PR
Sbjct: 60  TVDYLMNFTDVDDKIIRAAKE------LGTTAPEVAERFINAFNEDTAALNVKPATMNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +HI  +I  I  ++  G+AY  N ++ + T    +YG  S + IDE ++G       E
Sbjct: 114 VMDHIEDIIAFIAALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRTGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  WESPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +  AN W+HNG++ +  +  KMSKS GNF+T++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     V+R  +  T YR PI ++   L EA+  L K   T                   
Sbjct: 286 KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDEE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
             +      +   +  + +D N  + I  +++LA+      +               F+ 
Sbjct: 346 VNAAVLEEFEERFVKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLAAGLAKFSE 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L+ ER+   K K F+ +D IR +L+ +G ILED   
Sbjct: 406 WLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|322392299|ref|ZP_08065760.1| cysteine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144834|gb|EFX40234.1| cysteine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 447

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/465 (36%), Positives = 242/465 (52%), Gaps = 33/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWNSPWGPGRPGWHIECSVMSTEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +AE  L     T          +          
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDAGELQAFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++A+  D NT + I  + ++A+     +    +    A +L        + + +   IE 
Sbjct: 346 VAAMDEDFNTANGITVVFEMAKWINSGNYDAAVKETLAAML-EVFGVVFVEEVLDEEIEA 404

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 405 LIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|325695526|gb|EGD37426.1| cysteine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 447

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPKEVADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L++ER +    + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IECLIEERQVARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|323339370|ref|ZP_08079655.1| cysteine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093193|gb|EFZ35780.1| cysteine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 470

 Score =  548 bits (1413), Expect = e-154,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I NTL  K   F+ ++   ++MYVCGPTVY++ HIGNAR  + FD + R   Y   E 
Sbjct: 2   IQILNTLSGKKEIFKPLEEGKVKMYVCGPTVYNYIHIGNARSAVAFDTVRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+          +   +  +T K    F +D   L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKIIKAG------HEMKMTVKEVTDKFIAAFYEDIDALNIKRATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---- 180
             + +  +I  IQ +I  G+AY++  ++ +      +YG  S + +D+ + G        
Sbjct: 114 VMDTMDDIIKFIQVLIDKGYAYQSEGDVYYRARKFKDYGKLSGQSVDDLEQGASERVADF 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           ++  K++P DF LWK + P E  WE+P+G GRPGWHIECS M++ YLGK  DIH GG DL
Sbjct: 174 DQGKKEDPLDFALWKAAKPGEIYWEAPFGNGRPGWHIECSVMATKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +   N W+HNGF+ +  E  KMSKS GNF+T+++LL      
Sbjct: 234 EFPHHENEIAQSEAETGQK-FVNYWMHNGFVTIGEEDEKMSKSLGNFVTVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
            +     V+R  M  T YR PI ++   L EA+  L K      +               
Sbjct: 287 -KKVDPQVVRFFMATTQYRHPIRYSQANLAEAKTNLQKLKTAVDNLRYRKNDAEKSDVEN 345

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
                   +    + A+ +D NT + I  ++++A+      +           LL  F+ 
Sbjct: 346 EIREKFSALKNRFIEAMDDDFNTQNGIAVIYEMAKLLNVYSEKATVSLETIEYLLDGFSK 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +A + GI+  +E   + +   IE L++ER+   K + F+ +D IR  L+ KG ILED   
Sbjct: 406 AAEVFGIKFEEE--TELLDEKIEALIEERIAARKARNFAQSDEIRDMLKEKGVILEDT-- 461

Query: 448 PDNGQRMTRWKQ 459
                + TRWK+
Sbjct: 462 ----PQGTRWKR 469


>gi|325681889|ref|ZP_08161407.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|324978533|gb|EGC15482.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 478

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 167/492 (33%), Positives = 256/492 (52%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 10  LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYK- 68

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K    F++DT  +     T  PR
Sbjct: 69  -VNYVSNFTDVDDKMIKAAAEQ------GITVPQLAEKYINAFMEDTAAINIEPATLHPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I ++I  +Q +I  G+AY  + ++ +      +YG  S + +D+ ++G        
Sbjct: 122 ATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSAD 181

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 182 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 241

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +     W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 242 EFPHHENEIAQSEAETGQK-FVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 295 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQTAFDNLTYREQDADEGDVQE 353

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
                       ++A+ +D+N  + I  +++L + +                +       
Sbjct: 354 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVEL 413

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G++  +   N+     I++L++ER I  K K F+ +D IR  L+ +G ILED    
Sbjct: 414 MSIFGVK-LEASDNQINDEKIKQLIEERNIARKNKDFARSDEIRDNLKKQGIILEDT--- 469

Query: 449 DNGQRMTRWKQK 460
               + TR+K++
Sbjct: 470 ---PQGTRYKKE 478


>gi|306825734|ref|ZP_07459073.1| cysteine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432095|gb|EFM35072.1| cysteine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 447

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMEDIIRFVTDLIEKGYAYESQGDVYFRVEKSHNYARLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGSGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R      HYR+PI+FT + + +AE  L     T      GI+D           
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGIVDAGELQDFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++ +  D N+ + I  + ++A+       +  +     A   + GI   +E L+ +    
Sbjct: 346 VAVMDEDFNSANGITVVFEMAKWINSGNYDASVKKSLAAMLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|56808516|ref|ZP_00366253.1| COG0215: Cysteinyl-tRNA synthetase [Streptococcus pyogenes M49 591]
 gi|209560085|ref|YP_002286557.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209541286|gb|ACI61862.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 447

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 162/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYIGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++E+L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHEMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
          Length = 582

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 178/510 (34%), Positives = 269/510 (52%), Gaps = 74/510 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +KK + +YNT+ RK   F+      + MYVCG T YDF+HIG+AR  + FD+LYR L+Y 
Sbjct: 80  IKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYL 139

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             + C  YVRN TD+DDKII RA +      + +    ++ +   +F +D + L CL P+
Sbjct: 140 GYDVC--YVRNFTDVDDKIIARANE------VGENPISLSRRFCDEFHQDMSYLHCLPPS 191

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR ++H+PQ+I +I+ I+ +G AY  + ++ F     P+YG  S RK+++ + G RV 
Sbjct: 192 VEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVA 251

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NPADF LWK +   EP WESPWG GRPGWHIECSAMSS YLG  FDIHGGG+DL
Sbjct: 252 IDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDL 311

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEI QSC A         W+HNGF+ +   KMSKS GNF TI +++E       
Sbjct: 312 MFPHHENEIVQSCAACCESN-IRYWVHNGFVTINSEKMSKSLGNFFTIRQVIEL------ 364

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSK-- 344
            +    +RL ++ THYR PI+++               Q L +++ LLS++ + +     
Sbjct: 365 -YHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSI 423

Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLP 383
                     +  + + ++ +DL+T   + AL    +                +   L  
Sbjct: 424 PQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAA 483

Query: 384 IFNASAHIL------------GIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSA 428
           +     H+L             +   +E   K +      +++ ++ER +  K K++  +
Sbjct: 484 LEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKYKEYEKS 543

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           D IRK+L + G  L D          T W+
Sbjct: 544 DAIRKELAAVGIALMDS------PEGTTWR 567


>gi|172054928|ref|YP_001806255.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171701209|gb|ACB54189.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 486

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 175/493 (35%), Positives = 256/493 (51%), Gaps = 58/493 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIYN+  R++  F  + P  + MY CG TVYD+ H+G+AR  I++D++ R L+++ 
Sbjct: 4   EMTLKIYNSQTRRLEPFVTLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLQWWG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VTYV+N TDIDDKI+ RA+QE        +++ I+ +  + +  D   L  +    
Sbjct: 64  YE--VTYVQNFTDIDDKILRRAQQE------GVSMADISQRFIEAYFTDIRPLNVMDADQ 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
            PR T++I  +  LIQ ++   +AY  + ++ F   +   YG  S R     + G     
Sbjct: 116 YPRVTDNISGIQQLIQVLLDKNYAYAVDGDVYFHVEAFGEYGKLSGRSQSMMQAGASGRV 175

Query: 179 ---VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
                EK  KK+P+DF LWK + P EP W SPWG GRPGWHIECSAM    LG+  DIHG
Sbjct: 176 AVNDLEKTKKKHPSDFALWKSAKPEEPAWHSPWGEGRPGWHIECSAMVRALLGETIDIHG 235

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL+FPHHENEIAQS  A+  +  A  W+HNG + + G KMSKS GNF TI ELL   
Sbjct: 236 GGGDLVFPHHENEIAQSEAANG-KPLAKYWLHNGMVTVNGEKMSKSLGNFTTIRELLN-- 292

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSK--WPQ 339
               R     VIRL +L  HYR+P+DFT + ++ A              E    +  W +
Sbjct: 293 ----RPLDPMVIRLFVLQAHYRKPLDFTEEAISSATNGWQTLQQGLRFGEKYEDRLGWQK 348

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
                  +     +A+ +D N+   +  L +LA+   +  +LL                 
Sbjct: 349 NQELDSAVIEQFKAAMDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKNPTDSDNLQRQW 408

Query: 383 PIFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                 A ILG+E   E   ++        I KL+Q+R    K+K ++ +D +R+QL+ K
Sbjct: 409 QTLVHLAGILGLEAKSEANLEDNQNFDEAEITKLIQQRNEARKVKDYAQSDRLREQLQEK 468

Query: 439 GFILEDYKNPDNG 451
           G  L D+ N +  
Sbjct: 469 GITLIDHPNGETS 481


>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 452

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 179/467 (38%), Positives = 253/467 (54%), Gaps = 43/467 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL ++   F  IDP+ + MYVCG TVYD+ H+G+AR +++FDV+ R LR ++   
Sbjct: 2   LKIYNTLSKQKEVFHPIDPNKVGMYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHF--P 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA      +   + I  +T++      +D   L  L P  +PR
Sbjct: 60  NVEYVRNITDIDDKIIKRA------VENKEDIYSLTNRFIDAMHEDERALGVLPPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ + QM Y+I+ +I  G AY+A N ++ +       YG  S + +DE + G RV  + 
Sbjct: 114 ATDAMDQMFYMIEALIEKGIAYQAKNGDVYYSVRDFEGYGKLSGKNLDELEAGARVDIET 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK + P EP W SPWG GRPGWHIECSAMS+H+LG  FDIHGGG+DL FP
Sbjct: 174 DKKDPLDFVLWKMAKPSEPSWSSPWGDGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H GF+N+   KMSKS  NF TI  +LE       S+ 
Sbjct: 234 HHENEIAQSEGANGC-TFVNTWMHVGFVNINDEKMSKSLNNFFTIRVVLE-------SYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
              +R  ++ +HYR P++F+   L  A+  L++           D A             
Sbjct: 286 GETLRYFIMSSHYRSPLNFSDDNLNLAKTSLTRLYTAMRGLSASDAAMDEVSQRFDFESR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK---- 398
             +AL +D NT  A+  L +LA+      D        L  +       +GI        
Sbjct: 346 FNAALDDDFNTPIALSILFELAKAVNLQRDQDIDQANALSQLLQKLGGYIGILQTDADSF 405

Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +         I+  +++R      K F+ +D+IR +L   G  L+D
Sbjct: 406 LKRGVDLADEDIDAKIKQRDEAKAYKDFALSDHIRGELPKLGLELKD 452


>gi|319943420|ref|ZP_08017702.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743235|gb|EFV95640.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 506

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 176/527 (33%), Positives = 258/527 (48%), Gaps = 89/527 (16%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + +K+YN+L R+  +FQ ++   + +YVCG TVYD+ HIG+AR ++ FDV+ R LR  
Sbjct: 1   MARTLKLYNSLTRRKEDFQPLEAGRVGLYVCGMTVYDYCHIGHARMLVAFDVVQRWLRAR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  VTYVRNITDIDDKII RA      +   + +S +T +      +D   L    P 
Sbjct: 61  GYQ--VTYVRNITDIDDKIIRRA------VENGETLSSLTGRFIAAMHEDEAALGIQRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +PRAT ++PQM+ L+  +  +G+AY + + + +F       YG    + +D+ + G RV
Sbjct: 113 LEPRATQYVPQMLDLVSLLEKNGYAYRSGDGDTLFRVRRFAGYGRLGGKSLDDLRAGERV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K++P DF+LWK + P EP    W+ P+G GRPGWH+ECSAMS+  LG+ FDIHGG
Sbjct: 173 AVAAGKEDPFDFVLWKAAKPEEPAEACWQGPFGPGRPGWHLECSAMSTRLLGRQFDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           G DL FPHHENEIAQS  A      +     W+HNGF+ ++G KMSKS GNF TI ++L 
Sbjct: 233 GADLQFPHHENEIAQSDAAYFPEGGKSFVRYWLHNGFVQVDGEKMSKSLGNFFTIRDVL- 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--- 350
                 + +   VIR  ++ +HYR  ++++   L +A   L +     ++      A   
Sbjct: 292 ------KKFDGEVIRFFIVRSHYRSQVNYSDAGLDDARESLLRLYNALSTDWPAAQAQVE 345

Query: 351 -------------------------------------------VLSALYNDLNTVSAIQA 367
                                                         A+ +D NT  A+  
Sbjct: 346 GQAGQGAAVSAGAGQAAAAACADGEAARAAVAAIDWSEPRAMRFAEAMDDDFNTPVAVSV 405

Query: 368 LHKLARESTKNHD--LLPIFNASAHILGIEVCK-------------EHLNKNISIAIEKL 412
           L +LA +  +  D  +       A +LG+                  H       AI+ L
Sbjct: 406 LFELATDLNRTRDPAIERQLRGLAAVLGLLGQDPVAVRRNGLRGAAAHEGDLDDNAIQAL 465

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           V  RL   K + F+ AD IR+QL   G  LED      G   T W++
Sbjct: 466 VDARLAARKARNFAEADAIRQQLAEAGITLED------GPAGTTWRR 506


>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 490

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/511 (33%), Positives = 249/511 (48%), Gaps = 76/511 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL  ++ EF  ++P  + +Y CG TVYD +H+G+ R +IVFDVL R L Y   
Sbjct: 1   MSLRLYNTLTGRVEEFVPLNPPQVLIYTCGVTVYDDSHVGHGRSLIVFDVLRRYLEYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN TD+DDKII +AR+E            + ++    + +D   +       +
Sbjct: 61  --RVKFVRNFTDVDDKIINKAREECTHFM------TVANRYIASYYRDMEAIGVRPADVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HI ++I LIQ +I  G+AY +  ++ F   + P YG  SRR  +E + G RV   
Sbjct: 113 PRVTEHIQEIIQLIQGLIDKGYAYVSGGDVYFSVKAFPEYGKLSRRNPEELEAGARVEPS 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   EP W+SPWG GRPGWH EC AM   +LG   DIHGGGLDL+F
Sbjct: 173 EKKRDPLDFALWKAAKAGEPAWDSPWGPGRPGWHTECVAMIFKHLGTTIDIHGGGLDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+         A  W+HNG + + G+KMSKS GN++T+ E+          +
Sbjct: 233 PHHENEIAQAEALTG-RPFARYWVHNGLVTVGGQKMSKSLGNYVTLREVYSR-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
              V+RL +LMTHYR P+DF+  ++ E +    +     T   ++               
Sbjct: 285 HPDVLRLLVLMTHYRSPLDFSWDKMEETKRSYERLKNAITDAELLKELPSEEVREKHPLL 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTK-NHDLLP----------------- 383
                 +    + L +D NT SA+  L  L  E  K   ++L                  
Sbjct: 345 DKIRDAEEKFFADLADDFNTPSALGRLFTLVSEMGKLKKEVLERRRVKTSELDAYQQASE 404

Query: 384 -IFNASAHILGI--------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
            +      I G+              E   E  +      IE L++ R    + K ++ A
Sbjct: 405 TLLKHLRGIFGLFEDLYPVCSVRRVVEKEMEAGHVLDERLIELLIEVRSKARQEKAYAIA 464

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           D IR +L   G ILED          T+WK+
Sbjct: 465 DLIRDRLRELGIILEDT------PAGTKWKR 489


>gi|332076428|gb|EGI86891.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 447

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|88705054|ref|ZP_01102766.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700749|gb|EAQ97856.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 462

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 199/481 (41%), Positives = 280/481 (58%), Gaps = 46/481 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNT  +    F+ + P+ + MYVCGPTVY+ AHIGNARP++VFD L+RLL+  Y 
Sbjct: 1   MDLQLYNTRAKTKEVFRPLSPNRVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTRYD 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y RNITDIDDKI+  A+++        AI +I  + T ++ +DT +L  L PT +
Sbjct: 61  E--VVYARNITDIDDKIMLAAKEQ------GVAIDVIAKEFTDKYREDTAQLNALPPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT++I  MI L + +I  GHAY +   ++F  +S+ NYG  S R +D+   G RV   
Sbjct: 113 PHATDNIGPMIALTEKLIEKGHAYASEGHVLFAVTSMENYGQLSGRSLDDMLAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S+  EPGW+SPWGR RPGWH+ECSAM   +LG   DIHGGG DLIF
Sbjct: 173 DYKRHPGDFVLWKPSSDDEPGWDSPWGRVRPGWHLECSAMIREHLGPTIDIHGGGRDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQSCCA   E    +W+HN FL+++G KMSKS GN  TI ELL         +
Sbjct: 233 PHHENELAQSCCAFGDE-FVRVWMHNAFLDMDGEKMSKSLGNVATIRELLTR-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLS 353
              V+R A+L  HYR P++F+   L +AE  L+ +  T  S   I+          A  S
Sbjct: 285 RGEVLRFALLSAHYRSPLNFSEALLAQAEQTLTNFYNTLRSVQHIELDEDVPLEGEAFYS 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILG---------IEVCKE 399
           AL +DLNT  AI  LH LAR+  K  +     L     A+ ++LG         ++    
Sbjct: 345 ALCDDLNTPLAISELHALARDINKAAEDDKPQLKARLLAAGNLLGVLQHDPLEWLQGDSA 404

Query: 400 HLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             + ++   A++ L+ ER      K ++ AD IR++L + G +LED          T W+
Sbjct: 405 STDSSLDADAVDALIAERAAAKADKNYARADGIREELTAAGIVLEDS------AGGTLWR 458

Query: 459 Q 459
           +
Sbjct: 459 R 459


>gi|306826617|ref|ZP_07459922.1| cysteine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304431195|gb|EFM34199.1| cysteine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 447

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 161/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|194468084|ref|ZP_03074070.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194452937|gb|EDX41835.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 470

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 166/492 (33%), Positives = 255/492 (51%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K    F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAAEQ------GITVPQLAEKYINAFMEDTAAINIEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I ++I  +Q +I  G+AY  + ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 174 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +     W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 234 EFPHHENEIAQSEAETGQK-FVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIID- 348
            +     V+R  M  T YR PI ++   LT A+  L+          + +    +G +  
Sbjct: 287 -KEVDPQVLRFFMATTQYRRPIQYSQANLTAAQNNLNHIQTAFDNLTYREQDADEGDVQG 345

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
                       ++A+ +D+N  + I  +++L + +                +       
Sbjct: 346 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVNLGAIQAIKKELVEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G++  +   N+     I++L++ER +  K K F+ +D IR  L+ +G ILED    
Sbjct: 406 MSIFGVK-LEASDNQINDEKIKQLIEERNVARKNKDFARSDEIRDNLKKQGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TR+K++
Sbjct: 462 ---PQGTRYKKE 470


>gi|21911208|ref|NP_665476.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28896585|ref|NP_802935.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|25009287|sp|Q8K5T7|SYC_STRP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21905420|gb|AAM80279.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28811839|dbj|BAC64768.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 447

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 162/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TDIDDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDIDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|302024504|ref|ZP_07249715.1| cysteinyl-tRNA synthetase [Streptococcus suis 05HAS68]
 gi|330833540|ref|YP_004402365.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307763|gb|AEB82179.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 447

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/468 (35%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+ N TD+DDKII+ A +             ++ K    F +D  +L     T  PR
Sbjct: 61  -VTYISNFTDVDDKIIKAANE------AGMTTKELSDKFIAAFKEDVAKLGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G+AYEA+ ++ F      NY   + + + + + G       E
Sbjct: 114 VIDYMGEIIDFVQVLIDKGYAYEASGDVYFRVEKAENYARLANKTLSDLEAGASGRVEGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS C    +  AN W+HN  LN+   KMSKS GNF+T +++LE        
Sbjct: 234 FPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE-------Q 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID--------PAV 351
               V+R  +   HYR P+++T + +++AEI L     T T   +  +D         A 
Sbjct: 286 IDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I A+   A+       +  +   F     + GI   +E L+      
Sbjct: 346 EAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLEVFGIVFEEEVLDS----E 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IEALIAERQAARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|169824112|ref|YP_001691723.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
 gi|229558634|sp|B0S0W3|SYC_FINM2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167830917|dbj|BAG07833.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
          Length = 462

 Score =  548 bits (1412), Expect = e-154,   Method: Composition-based stats.
 Identities = 172/478 (35%), Positives = 247/478 (51%), Gaps = 47/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT-HQP 123
            V +V N TDIDDKII +A+ E      N     IT K  Q ++ + + L         P
Sbjct: 59  NVKFVSNFTDIDDKIINKAKDE------NIDFREITKKYIQAYLDNVSGLNFDEDDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172

Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK+     EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKTILGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS         AN W+HN  + ++  KMSKS  NF  + ++        + +
Sbjct: 233 PHHENEIAQSETCTGAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------QTSTSKG 345
              VIRL +L  HYR PIDF+   L   +  L +                   +   +  
Sbjct: 285 DLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDNIK 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE 395
                   A+ +D+NT  AI  L    +   KN+          D   + +  +++LGI 
Sbjct: 345 TFREKFEQAMDDDINTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLGIL 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             ++  + ++   IE+L+++R    K K F  AD IR +L S G +L+D ++    +R
Sbjct: 405 FKED--DDDLDSEIEELIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 460


>gi|19746854|ref|NP_607990.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|24418689|sp|Q8NZD1|SYC_STRP8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19749094|gb|AAL98489.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 447

 Score =  547 bits (1411), Expect = e-154,   Method: Composition-based stats.
 Identities = 162/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++E+L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHEMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|158340032|ref|YP_001521202.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158310273|gb|ABW31888.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 496

 Score =  547 bits (1411), Expect = e-154,   Method: Composition-based stats.
 Identities = 175/509 (34%), Positives = 243/509 (47%), Gaps = 66/509 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + ++NTL  +   F ++ P  + MY CG TVYD  H+G+AR  + +DVL R L++   
Sbjct: 1   MNLTLHNTLTNQKEPFISVHPERVVMYCCGVTVYDNCHLGHARSYMAWDVLRRYLKWCGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N TDIDDKI+ RA  E         +  ++ +    + +D  RL  L     
Sbjct: 61  --TVRYVQNFTDIDDKILHRAIVE------GITMQEVSDRYINAYFRDIRRLNILDADDY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP 180
           PR T HIP +  LIQ +   G+AY  + ++ +       YG  S RK+++ K   G RV 
Sbjct: 113 PRVTEHIPAIHQLIQALEQQGYAYAIDGDVYYSVRQFSEYGKLSGRKLEQLKVGAGGRVA 172

Query: 181 EKYH---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +      K++P DF LWK + P EP WESPWG GRPGWHIECSAM    LG+  DIHGGG
Sbjct: 173 DDTQDQKKRDPFDFALWKSAKPGEPAWESPWGLGRPGWHIECSAMIRARLGETIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK-K 296
            DL+FPHHENEIAQS      +  A  W+HNG + + G KMSKS GNF TI +LL+    
Sbjct: 233 GDLVFPHHENEIAQSEVLTG-QPLARYWLHNGMVTVNGEKMSKSLGNFTTIRDLLDGGWA 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
                     +RL +L  HYR+P+DFT   +  +                          
Sbjct: 292 DYPEPVDPMAVRLFVLQGHYRKPLDFTKDAIVASINSWQTLKAGILFGNRHRVALSSPFA 351

Query: 338 -----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------- 382
                PQ  +S+        SA+ +DLNT  A+  L +LA+   +  + L          
Sbjct: 352 SIQSSPQEPSSEDPWTKRFQSAMDDDLNTSGALAVLFELAKALQREGNRLVHEGKSQSSP 411

Query: 383 -------PIFNASAHILGIEVC-----KEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
                        A +LG+E        E   K     I  L+Q+R    K + F +AD 
Sbjct: 412 ELLWQQWQTLLYLAQVLGLEAKVNSDTDEATGKLDEAVITDLIQQRQTARKQRDFITADD 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IR QL + G  + D  +       TRW +
Sbjct: 472 IRAQLSAAGITVVDQPDGA-----TRWHR 495


>gi|125718833|ref|YP_001035966.1| cysteinyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125498750|gb|ABN45416.1| Cysteinyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 447

 Score =  547 bits (1411), Expect = e-154,   Method: Composition-based stats.
 Identities = 168/468 (35%), Positives = 243/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +A   L     T          S          
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQAESAQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++         + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKGALAELLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|158337192|ref|YP_001518367.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158307433|gb|ABW29050.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 504

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 176/518 (33%), Positives = 254/518 (49%), Gaps = 74/518 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R    F  ++   ++ Y CG TVYD+ H+G+AR  IV+D++ R L++   
Sbjct: 1   MPLQIYNTLSRTKEPFTTLEAGKVQFYCCGVTVYDYCHLGHARSYIVWDIVRRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TDIDDKI++RA +             +T    Q +  D  RL  LA    
Sbjct: 61  D--VTYVQNYTDIDDKILKRAAE------TGQDWQAVTQTFIQAYEADMARLNILAADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           P+AT  IP +I LI+++   G AY A  ++ F     P YG  S R +D+ + G      
Sbjct: 113 PKATESIPAIINLIRDLETRGVAYAAQGDVYFAVERFPGYGKLSGRLLDQMEAGASGRVE 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P +  K++P DF LWK + P EP W+SPWG GRPGWHIECSAM +  LG   DIH G
Sbjct: 173 QLEPAEQKKRHPLDFALWKATKPGEPSWDSPWGPGRPGWHIECSAMVNQCLGAEIDIHAG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK- 295
           G DL+FPHHENEIAQS       + A  W+HNGF+N+ G KMSKS GNF TI +LL+T  
Sbjct: 233 GSDLVFPHHENEIAQSEAGL-TPRLARYWMHNGFVNVGGEKMSKSLGNFTTIRQLLDTPL 291

Query: 296 -KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------ 342
               G++     +RL +L   YR+PIDFT   +  A+       +               
Sbjct: 292 PILAGKTLHPMALRLFVLQAQYRKPIDFTDDAIAAAQQSWQTLKEGLLFGYDYGAQLQWS 351

Query: 343 ----------------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--- 383
                              +       A+ +D N+ S +  L +LA++  K  ++L    
Sbjct: 352 DYTDPDFGNPANMRIPDPNVAVQRFQLAMDDDFNSPSGLVVLFELAKDLRKAGNILSHQG 411

Query: 384 --------------IFNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKM 422
                              A +LG+E   +         +     AIE L++ER    + 
Sbjct: 412 ETSTTSEQLREQWQTLVCLAQVLGLEAQPDSDAASTDSEDGLSEQAIEALIEERQAARQA 471

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           K ++ +D IR QL+++G  L D         +TRW ++
Sbjct: 472 KNYAESDRIRDQLKAEGITLIDQAGG-----VTRWLRE 504


>gi|94989286|ref|YP_597387.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94993175|ref|YP_601274.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542794|gb|ABF32843.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546683|gb|ABF36730.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 447

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 161/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDSEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|107028742|ref|YP_625837.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690099|ref|YP_835722.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|254247826|ref|ZP_04941147.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|123370109|sp|Q1BHP1|SYC_BURCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200131|sp|A0K8K2|SYC_BURCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|105897906|gb|ABF80864.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648188|gb|ABK08829.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|124872602|gb|EAY64318.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 465

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 178/484 (36%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D T L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDETALGIQRPDVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      +YG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   EP    W S +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGGLAADEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|157150688|ref|YP_001449668.1| cysteinyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157075482|gb|ABV10165.1| cysteinyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 447

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 166/465 (35%), Positives = 242/465 (52%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  +++++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTC-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R      HYR+PI+FT + + +A   L     T          S          
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQDFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKTAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE+L++ER +    + F++AD IR +L ++G  L D K+     R
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446


>gi|303234834|ref|ZP_07321459.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
 gi|302493952|gb|EFL53733.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
          Length = 462

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 172/478 (35%), Positives = 246/478 (51%), Gaps = 47/478 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT-HQP 123
            V +V N TDIDDKII +A+ E      N     IT K  Q ++ + + L         P
Sbjct: 59  NVKFVSNFTDIDDKIINKAKDE------NIDFREITKKYIQAYLNNVSGLNFDEDDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT +I +MI  ++ +   G AY  +  + FD +   +YG  S++ ID+ + G R+    
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172

Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKNP DF LWK+     EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS         AN W+HN  + ++  KMSKS  NF  + ++        + +
Sbjct: 233 PHHENEIAQSETCTGAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------QTSTSKG 345
              VIRL +L  HYR PIDF+   L   +  L +                   +   +  
Sbjct: 285 DLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDNIK 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE 395
                   A+ +D+NT  AI  L    +   KN+          D   + +  +++LGI 
Sbjct: 345 TFREKFEQAMDDDINTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLGIL 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             ++  + ++   IE L+++R    K K F  AD IR +L S G +L+D ++    +R
Sbjct: 405 FKED--DDDLDSEIEDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 460


>gi|299821033|ref|ZP_07052921.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816698|gb|EFI83934.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 473

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 171/485 (35%), Positives = 251/485 (51%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL R+   F+ +    + MYVCGPTVY++ HIGNARP+I FD + R L Y   + 
Sbjct: 3   LQLFNTLTREKEVFKPLVNGKVSMYVCGPTVYNYIHIGNARPIIFFDTVRRYLTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +      ++  +  +  K    F +D  +L     T  PR
Sbjct: 62  -VNYVSNFTDVDDKLIRAAEE------LDLTVPEVADKFIHAFFEDVDQLNVARATTNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I  IQ ++  G+AYE+  ++ F T     YG  S + + + + G RV     
Sbjct: 115 VTENMQEIIDFIQALVDKGYAYESAGDVYFATKKFDAYGKLSHQPLQDLQHGIRVETTDK 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESPWG+GRPGWHIECSAM+  +LG   DIH GG DLIFPH
Sbjct: 175 KRDELDFTLWKAAKPGEINWESPWGKGRPGWHIECSAMAQKFLGDTIDIHAGGHDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE+EIAQS      ++ AN W+HN FLN++G KMSKS GNFIT++++L            
Sbjct: 235 HEDEIAQSEARTG-KQFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLAEH-------AP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            V+R  ML  HYR PI  +   L +A+  L +      +                     
Sbjct: 287 DVVRFFMLSVHYRNPISLSEDTLEDAKNSLERLRTAYQNIDYRIQHAEEDVADEETTEDW 346

Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
                 +  +    + +D NT +AI   H+LA+ +               + L +    A
Sbjct: 347 LEQLTELKQSFEDEMDDDFNTANAITVFHELAKRANIYLAEEDVSITVLREFLSMLQLFA 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           ++LG+++  E   +     IE L++ERL     + F  AD IR+ L SK  ILED  +  
Sbjct: 407 NVLGLKLETEQAFELADEEIEALIEERLKARNERNFERADEIRELLRSKHIILEDTAHGT 466

Query: 450 NGQRM 454
             +R 
Sbjct: 467 RFKRG 471


>gi|327460677|gb|EGF07012.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327488752|gb|EGF20551.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 447

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 170/468 (36%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPKEVADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  ++ ++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHDYAKLANKTLADLELGASGRTNEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +A   L     T      G  D           
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+          +   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|186476148|ref|YP_001857618.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184192607|gb|ACC70572.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 465

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 181/487 (37%), Positives = 259/487 (53%), Gaps = 54/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQNFVPLHEGEVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  K--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIAALHEDADALGIERPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  +PQM+ +I+ +  +G+AY+A + ++ +      NYG+ S + +++ + G RV  
Sbjct: 114 PRATEFVPQMLGMIEKLEANGYAYQAADGDVNYAVRKFENYGALSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK+S P EP   GWES +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQSKPDEPADTGWESKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A R +   N W+HNG++ ++  KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEGATR-QTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----QTSTSKGIID------ 348
              + A V+R  +   HYR P++++   L +A   L++       T    G +D      
Sbjct: 288 --KYDAEVVRFFIARAHYRSPLNYSDVHLDDARGALARLYTALKDTPPQAGEVDWNEAYA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF----------------NASAHIL 392
               +A+ +D NT  A+  L +L  E  +  D                            
Sbjct: 346 QRFRAAMNDDFNTPVAVSVLFELVSEVNRTRDAALARQLHGLGLVLGLLGREPRVYLQQA 405

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G  V +  L+   + AIE  +  R+   + K ++ AD IRK+L   G  LED        
Sbjct: 406 GASVGEGALD---TAAIEAKIAARVAAKQAKDYAEADRIRKELLDAGIALEDKPGG---- 458

Query: 453 RMTRWKQ 459
            +T W++
Sbjct: 459 -LTEWRR 464


>gi|281492464|ref|YP_003354444.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376128|gb|ADA65619.1| Cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 448

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 164/473 (34%), Positives = 253/473 (53%), Gaps = 42/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A  E      N +   ++ +    F +DT  L     +  P+
Sbjct: 60  -VQYISNFTDVDDKIIKAAANE------NISTKELSERYIAAFYEDTDALNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI  IQ ++    AY +  ++ F  S   +Y   + + + +   G       E
Sbjct: 113 ATEFIEAMIEFIQELVDKEFAYVSQGDVYFRVSKSKDYAKLANKNLADLLAGASGRTDEE 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++PADF LWK +   E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TKLKESPADFALWKSAKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      ++  N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQSEAKTG-QRFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVVN----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
               ++R  +  THYR P++FT   LTEAE  + K                ++       
Sbjct: 287 --PQILRFFLATTHYRRPVNFTDDALTEAENNIKKIENAYRHLDEQAESNLSALTTFRND 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
            ++A+  D N  + +   +       K +   ++   F+    ILGI+   E    ++  
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGPEVKEFFDQVLEILGIKFKFEQ---SLDS 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IE +++ R +  +++ F+ +D IR  L+++G +LED K+        RW ++
Sbjct: 402 EIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKD------GVRWHRE 448


>gi|301793788|emb|CBW36177.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|332204613|gb|EGJ18678.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 447

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 175/468 (37%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++ +I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEGLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|296327724|ref|ZP_06870264.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296155162|gb|EFG95939.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 473

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 176/492 (35%), Positives = 267/492 (54%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V YV+N TD+DDK+I +A  E      N +I  I  +  + + +DT+++        +P
Sbjct: 61  -VNYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKINLKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +IQ+++  G+AYE+N ++ F+     + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIQSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L       + +
Sbjct: 234 PHHENEMAQSKCGCGG-TFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KYF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIRL +L +HYR+P++F+   L + +  L +   T      +D              
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
                     + A+  D NT  A+  + +L +   K  D   I                 
Sbjct: 346 ATKKEMEAKFIEAMNEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLVM 405

Query: 390 ---HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|81429293|ref|YP_396294.1| cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|109894906|sp|Q38UZ6|SYC_LACSS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78610936|emb|CAI55988.1| Cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 468

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 165/491 (33%), Positives = 251/491 (51%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+   F+ ++   ++MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 2   LTVYNTLTRQKETFKPLEEGRVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A  E      N  +  +  +    F +DT  L     T  PR
Sbjct: 61  -VDYVSNFTDVDDKMIKAANAE------NITVPELADRYITAFKEDTKALNIEPATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT++I +++  IQ++I   +AY  + ++ +       YG  + + +D+ + G        
Sbjct: 114 ATDNIEEIVAFIQDLIAKDYAYAVDGDVYYRARKFKAYGHLAGQDLDQLEQGASEHTATE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK     E  WESPWG+GRPGWHIECS MS+ YLG   DIHGGG DL
Sbjct: 174 ETLRKEDPIDFALWKAEKGNEIAWESPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +   N W+HNGF+ +  + +KMSKS GNF+T+++L+      
Sbjct: 234 EFPHHENEIAQSEAKTG-QTFVNYWLHNGFVTVGDDDQKMSKSLGNFVTVHDLI------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
            +      +R  M  T YR PI ++   L EA+  L +   T  +               
Sbjct: 287 -QEVNPQALRFLMSSTQYRRPIRYSQSLLAEAQTNLDRLKTTLDNLAFRQPTAEPGEDQI 345

Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                  ++ A ++A+ +D N  + +  L++LA+ S +  +           L       
Sbjct: 346 VMDKAAELEAAFVTAMDDDFNVQNGLTQLYELAKLSNQYLEQPTVQSDTLTSLATRLTRL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+       ++ +   +E L++ER      K F+ +D IR QL+++G ILED    
Sbjct: 406 LAIFGVVF---KADQLLDTEVESLIEERQAARAAKDFAKSDAIRDQLKAQGIILEDT--- 459

Query: 449 DNGQRMTRWKQ 459
               +  RW++
Sbjct: 460 ---PQGMRWRR 467


>gi|257866301|ref|ZP_05645954.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257873183|ref|ZP_05652836.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257800259|gb|EEV29287.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257807347|gb|EEV36169.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 470

 Score =  547 bits (1411), Expect = e-153,   Method: Composition-based stats.
 Identities = 169/494 (34%), Positives = 248/494 (50%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL R+   FQ ++   ++MYVCGPTVY++ HIGN R  + FD + R   Y     
Sbjct: 2   IKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++      +      +  +    F +DT  L     T  PR
Sbjct: 60  TVDYLMNFTDVDDKIIRAAKE------LGTTAPEVAERFINAFNEDTAALNVKPATMNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PE 181
             +HI  +I  I  ++  G+AY  N ++ + T    +YG  S + IDE ++G       E
Sbjct: 114 VMDHIEDIIAFIVALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRIGEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK +   E  WESPWG GRPGWHIECS M++ +LG+  DIHGGG DL 
Sbjct: 174 QKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDLT 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
           FPHHENEIAQS      +  AN W+HNG++ +  +  KMSKS GNF+T++E++       
Sbjct: 234 FPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
           +     V+R  +  T YR PI ++   L EA+  L K   T                   
Sbjct: 286 KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDEE 345

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
             +      +   +  + +D N  + I  +++LA+      +               F+ 
Sbjct: 346 INAAVLEEFEERFVKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLAAGLAKFSE 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I GI    E L   +   IE+L+ ER+   K K F+ +D IR +L+ +G ILED   
Sbjct: 406 WLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILEDT-- 460

Query: 448 PDNGQRMTRWKQKP 461
                + TRW+++ 
Sbjct: 461 ----PQGTRWRREA 470


>gi|294665915|ref|ZP_06731181.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292604319|gb|EFF47704.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 476

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 197/496 (39%), Positives = 267/496 (53%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I  +I +GHAY A   ++F  SS   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIDQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALETESGGDVAISKT 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
               V SAL +DLNT  A+  +  +A ++                +  +  A A +LG  
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSELMHSGQASARMAQLQAARAKLLGAG 405

Query: 396 VCKEHLNKN------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           V    L ++                I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 VALGLLQQDPAAWFSRGTDVGDDARITALVEERSAAKKAKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|139474431|ref|YP_001129147.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134272678|emb|CAM30949.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 447

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 162/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRIDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + L +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKALHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|53719852|ref|YP_108838.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|53723757|ref|YP_103282.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642953|ref|ZP_00441703.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|76809388|ref|YP_334067.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121599658|ref|YP_993471.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385862|ref|YP_001029097.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126441734|ref|YP_001059571.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126449503|ref|YP_001080979.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452065|ref|YP_001066849.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|134277835|ref|ZP_01764550.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167001797|ref|ZP_02267589.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|167720284|ref|ZP_02403520.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167739281|ref|ZP_02412055.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167816497|ref|ZP_02448177.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167830172|ref|ZP_02461643.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167846407|ref|ZP_02471915.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167894988|ref|ZP_02482390.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167903372|ref|ZP_02490577.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|167916840|ref|ZP_02503931.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167919625|ref|ZP_02506716.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|217420917|ref|ZP_03452422.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|226198973|ref|ZP_03794536.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237812906|ref|YP_002897357.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|242315930|ref|ZP_04814946.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254178125|ref|ZP_04884780.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254184417|ref|ZP_04891007.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254191450|ref|ZP_04897954.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254197349|ref|ZP_04903771.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254200234|ref|ZP_04906600.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254209314|ref|ZP_04915660.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254258938|ref|ZP_04949992.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254297083|ref|ZP_04964536.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254358017|ref|ZP_04974290.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|61216158|sp|Q62J37|SYC_BURMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216161|sp|Q63SS8|SYC_BURPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894887|sp|Q3JQT6|SYC_BURP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200132|sp|A3ML43|SYC_BURM7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200133|sp|A2SAX8|SYC_BURM9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200134|sp|A1V5G8|SYC_BURMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200135|sp|A3NWX8|SYC_BURP0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200136|sp|A3NB50|SYC_BURP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52210266|emb|CAH36245.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52427180|gb|AAU47773.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|76578841|gb|ABA48316.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|121228468|gb|ABM50986.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293882|gb|ABN03151.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126221227|gb|ABN84733.1| cysteine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|126225707|gb|ABN89247.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126242373|gb|ABO05466.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|134251485|gb|EBA51564.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|147749830|gb|EDK56904.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147750087|gb|EDK57158.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148027144|gb|EDK85165.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|157807476|gb|EDO84646.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|157939122|gb|EDO94792.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|160699164|gb|EDP89134.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|169654090|gb|EDS86783.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|184214948|gb|EDU11991.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|217396329|gb|EEC36346.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|225929073|gb|EEH25097.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237504389|gb|ACQ96707.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|238524180|gb|EEP87614.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242139169|gb|EES25571.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243062482|gb|EES44668.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254217627|gb|EET07011.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 465

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 246/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R   +F    P  +RMYVCG TVYD+ HIG+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRARGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T + T     D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIQSLTRRFTDAMNADFDALGVERPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATEFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGRLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P EP    WES +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPQEPAGASWESKYGAGRPGWHIECSAMGCTLLGAHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 288 --KFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPDAQPLDWSEAHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------------HILGIE 395
               +A+ +D NT  A+  L +LA E  +  +                        L   
Sbjct: 346 QRFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLRLLAGLLGLLGREPREFLQHA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 AGAARTGALEPHEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|42518493|ref|NP_964423.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|61216256|sp|Q74L26|SYC_LACJO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|41582778|gb|AAS08389.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 470

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 170/493 (34%), Positives = 251/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 1   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH        +  +  +  + F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARKEHT------TVEKLAERYIKAFMEDTEALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 113 ATHEIKEIIDFVQDLIDKGVAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +     KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +     V+R  M    YR PI+++   L +AE +L ++  T  +              
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETLED 344

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
                         + A+ +D N  +A+  ++ LA     +                +  
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKLLI 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+   +E         IEKL+ +R    K K ++ +D +R +L++KG ++ED  
Sbjct: 405 AWLEIFGVSFKEEQAEN--DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIEDT- 461

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW +
Sbjct: 462 -----PQGTRWHR 469


>gi|197334356|ref|YP_002156417.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|197315846|gb|ACH65293.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 460

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 172/482 (35%), Positives = 254/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 1   MKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +       D   L    P  +PR
Sbjct: 60  -LTFVRNITDIDDKIIKRAAEN------GETCDALTERLIADMHADFDALNMKRPDVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--PE 181
           AT +I +++ L++ +I  G AY A N +++F+      YG  SR+ +++ + G+RV   E
Sbjct: 113 ATEYIKEIVALVERLIERGFAYVASNGDVMFEVKKYDEYGRLSRQDLEQLQAGSRVTLEE 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL+
Sbjct: 173 ASVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLM 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA       N W+H+G + ++  KMSKS GNF TI ++L         
Sbjct: 233 FPHHENEIAQSCCAHDT-PYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------H 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
           + +  +R  ++  HYR  ++++ + L +A   L +            T            
Sbjct: 285 YDSETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLSVTPAGGEEFVGRFS 344

Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCK 398
           +A+ +D NT  A   L ++ARE  +           L  +    A +LG+         +
Sbjct: 345 TAMNDDFNTPEAYSVLFEMAREVNRLKTENLDTASKLGALMRELADVLGLLSQEPEAFLQ 404

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    IE L++ R      K +++AD  R  + +   +LED      G   T W+
Sbjct: 405 GGSSNDDVAEIEALIKARNDARAAKDWAAADAARDAIAALNIVLED------GPEGTTWR 458

Query: 459 QK 460
           +K
Sbjct: 459 RK 460


>gi|295687961|ref|YP_003591654.1| cysteinyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295429864|gb|ADG09036.1| cysteinyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 463

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 192/481 (39%), Positives = 271/481 (56%), Gaps = 42/481 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KI++TL R+  +F   DP  + MYVCGPTVY++AHIGN RP++VFDVLYR+LR+ YG
Sbjct: 1   MTLKIHDTLAREKRDFVPADPKRVTMYVCGPTVYNYAHIGNFRPVVVFDVLYRVLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E+ V Y RN+TD+DDKI ++A  E   I      S+IT +    + +D   L  L P  +
Sbjct: 61  EEAVVYARNVTDVDDKINKKAADEGVPI------SVITERYLAAYHEDADALGALRPDLE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  ++ +I  ++ +G AY A   ++FDT S  +YG  S R +DE   G RV   
Sbjct: 115 PKATEHIDAILEMIGQLVDNGSAYAAEGHVLFDTQSFADYGQLSGRPLDEMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++PADF+LWK S   EP WESPWG GRPGWHIECSAM    LGK  DIH GG+DL F
Sbjct: 175 PYKRHPADFVLWKPSKENEPEWESPWGAGRPGWHIECSAMIDKALGKTIDIHAGGIDLTF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA +    AN W+HNGFL++ G KMSKS GN I  +ELL+T        
Sbjct: 235 PHHENEVAQSRCAHKTAVLANYWMHNGFLDMGGEKMSKSLGNVIIPHELLKTV------- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLSA 354
           P  VIR A+L  HYR+P+D+T + L +++  L +          +           V++A
Sbjct: 288 PGEVIRWALLSAHYRQPLDWTPELLEQSKKSLDRLYGALRRAKDVPMDQAMEAPAEVIAA 347

Query: 355 LYNDLNTVSAIQALHKL---------ARESTKNHDLLPIFNASAHILGIEV------CKE 399
           L +DLNT  A  A  ++         A +S            +  +LG          + 
Sbjct: 348 LMDDLNTPLATSAFFEVSSLIEKAVTAGDSVAIAANKARLLEAGALLGFLQADPDSWFEG 407

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +  +   +E L+ +R+     K +++AD IR +L++ G ++ D      G     W+ 
Sbjct: 408 DASDELKAKVEDLLAQRVAARAAKDWTAADAIRAELDALGVVVMD------GPSGATWRM 461

Query: 460 K 460
           K
Sbjct: 462 K 462


>gi|332359270|gb|EGJ37091.1| cysteine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 447

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 166/465 (35%), Positives = 242/465 (52%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  +++++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +A   L     T      G  D           
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE+L++ER      + F++AD IR +L ++G  L D K+     R
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELATQGIKLLDTKDGVRWTR 446


>gi|209542601|ref|YP_002274830.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530278|gb|ACI50215.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 453

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 197/468 (42%), Positives = 268/468 (57%), Gaps = 32/468 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ ++++  RK   F  +DP N+R+Y CGPTVYD AHIGN R M+  D+L RLLR+ Y 
Sbjct: 6   PQLTLHDSRSRKTVPFAPLDPGNVRVYYCGPTVYDLAHIGNLRAMVTADILVRLLRHLY- 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI  RAR         + I  +T++  + F +D   +  L P  +
Sbjct: 65  -PRVTYVRNITDVDDKINTRARAN------GETIDSLTARTIRDFHEDLDAVGILPPDIE 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI +M+ LI  +I  GHAYEA   ++F  S  P YG+ S R  ++   G RV   
Sbjct: 118 PRATHHIAEMLTLIGQLIDSGHAYEAQGHVLFAVSRFPAYGALSGRSPEDLLAGARVEVA 177

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S P  PGWESPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+F
Sbjct: 178 PYKRDPGDFVLWKPSAPDLPGWESPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLLF 237

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C     + AN W+HN  L + G KMSKS GNF+T+ + L          
Sbjct: 238 PHHENELAQSQCCFPHGRFANHWVHNAMLLVNGEKMSKSLGNFLTVRDALSVS------- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYN 357
           PA  +RL +L   YR  ++FT+  L +A+  L+++ +            +   VL+AL +
Sbjct: 291 PAEALRLLLLHAQYRSVLNFTLAGLEDAKQTLNRFYRAVGDTPPDGTVPVPAPVLAALCD 350

Query: 358 DLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS-----IAIEK 411
           DLNT  A+  +H LA R    + D      A+  +LG+    E              IE+
Sbjct: 351 DLNTPRALAEMHALADRALAGDRDAALGLRAAGQLLGLLGQTEDAWFRAGTYVHPETIER 410

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ ER    K + F+ AD IR+ L   G +LED      G   T W++
Sbjct: 411 LIVERQDARKSRDFARADAIRESLAKDGIVLED------GPSGTTWRR 452


>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 481

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 168/500 (33%), Positives = 245/500 (49%), Gaps = 64/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++IK+YNTL+R+    + I+   +++YVCG T Y+  HIGNARP + +D++ R L Y   
Sbjct: 2   EEIKVYNTLKREKQILKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +++N TD+DDKII +A  E            ++++    + K    L        
Sbjct: 62  --HVDFIQNFTDVDDKIINKANAEKSDW------KTVSTRYIDAYFKVMDALHIRRADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  + H+  +I +++ +I  GHAY   N++ +D S+  +Y   S RK+++   G RV   
Sbjct: 114 PYVSKHMGDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVMVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK + P EP WESPWG GRPGWHIECS MS+HYLG  FD HGGG DLIF
Sbjct: 174 TAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +     W+HNGF+ +   KMSKS  NF  + ++LE        +
Sbjct: 234 PHHENEIAQSEGATGQK-FVKYWLHNGFITINSEKMSKSLNNFFLVKDVLE-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------- 348
               +R  +L THYR P+DF+ +RL EAE  +SK          ++              
Sbjct: 286 SGDALRYFLLSTHYRSPLDFSDERLEEAEKNMSKLKDVIARIKEMEKEDGKVETNESVSL 345

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNH---------------DLLPIF 385
                        A+ +D NT  A   L    ++    +               +    F
Sbjct: 346 KKAAARTIEEFRQAMNDDFNTGLATGVLFDFVKDINIYYNAVNSGVAIDKEAVIEAKETF 405

Query: 386 NASAHILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                ILGI      + + H   +    +E ++  R I  K K++  AD IR +L   G 
Sbjct: 406 KTILDILGILENEWNIQESHAGSDYDALMEMILSVREIARKEKQYKLADEIRDKLAELGI 465

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            +ED           RWK++
Sbjct: 466 TVEDSAT------GARWKKR 479


>gi|58336686|ref|YP_193271.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|227903247|ref|ZP_04021052.1| cys-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|81311530|sp|Q5FM34|SYC_LACAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58254003|gb|AAV42240.1| cys-tRNA synthetase cycrs [Lactobacillus acidophilus NCFM]
 gi|227869052|gb|EEJ76473.1| cys-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 477

 Score =  547 bits (1410), Expect = e-153,   Method: Composition-based stats.
 Identities = 171/495 (34%), Positives = 254/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRIYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGYQ- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E         +  +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEK------ITVPELAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEIKDIINFVKVLIDKGYAYEVDGDVYYRAKKFQHYGELSDQNIEQLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKGPDEIAWDSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +   N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTDQK-FVNYWMHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------- 342
             R     V+R  M    YR  I+++ + L +A  +L ++  T T               
Sbjct: 290 --RKIDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRIADDTPTKTS 347

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
                +    +   ++A+ +D N  +A+ +++ L       A     + D L +F     
Sbjct: 348 EDLVKAINETEEKFVAAMDDDFNVQNALTSIYDLLPVVNANANSDNVDKDALKLFEEKLA 407

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G+++ K       +    IE+LV +R      K ++++D IR QL+  G  ++D
Sbjct: 408 AWLLVFGVDIKKLCAQTTGSNDEEIEELVSKRDEARNNKDWATSDQIRDQLKEMGITIQD 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 468 T------PQGTRWTR 476


>gi|304309880|ref|YP_003809478.1| Cysteinyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795613|emb|CBL43812.1| Cysteinyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 474

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 201/494 (40%), Positives = 275/494 (55%), Gaps = 58/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I ++NTL  +   F  I P  + MYVCGPTVY++ HIGNARP++VFD LYRLL+ +Y 
Sbjct: 1   MNIYLHNTLSGQKERFVPISPDRVTMYVCGPTVYNYVHIGNARPVVVFDTLYRLLKRHYP 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y RNITD+DDKI + A          + I  ++S+    +  D   L  L P  +
Sbjct: 61  E--VRYARNITDVDDKINKAASDN------RETICELSSRYADAYRSDMQALFNLTPQFE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT++I  MI +I  +I  GHAYEA   ++F+ S+ P+YG  S+R +D+   G RV   
Sbjct: 113 PRATDNIGAMIEIITTLIEKGHAYEAEGHVLFNVSTDPHYGCLSKRNLDDMIAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KKNPADF+LWK S+   PGW+SPWGRGRPGWHIEC+AM + +LGK  DIH GGLDL+F
Sbjct: 173 PYKKNPADFVLWKPSSDDLPGWDSPWGRGRPGWHIECTAMINAHLGKTIDIHAGGLDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ  CA + E+  N W+HNG+L ++G KMSKS GNF T++ELL       + W
Sbjct: 233 PHHENEIAQGTCAHQDERYVNYWLHNGYLTIDGEKMSKSLGNFATVHELL-------QHW 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------- 354
           P  V+R A+L  HYR P+D++   LT+A   L +             A   A        
Sbjct: 286 PGEVLRYALLSAHYRSPLDWSDDALTQARASLDRLYGALRGHTPSSCADTHATAPDALQH 345

Query: 355 ---------LYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKE 399
                    L +DL T  A+  LH+LA E+ ++ D      L  +  ++   +G+     
Sbjct: 346 PLLDTLEQHLADDLATPQALAVLHQLAGEANRSSDTPSRTQLQAVLASAGERMGLLTQDP 405

Query: 400 H--------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                           N     AIE L+Q+R    K K F+ +D IR  L+++G  LED 
Sbjct: 406 ESWFKWQAPAARDATGNGLDDAAIEDLIQQRRDARKAKNFARSDEIRDLLKAQGIELEDT 465

Query: 446 KNPDNGQRMTRWKQ 459
           +        TRW +
Sbjct: 466 R------EGTRWTR 473


>gi|19704900|ref|NP_602395.1| cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|22257049|sp|Q8RIK9|SYC_FUSNN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19712793|gb|AAL93694.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 473

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 176/492 (35%), Positives = 267/492 (54%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V YV+N TD+DDK+I +A  E      N +I  I  +  + + +DT+++        +P
Sbjct: 61  -VNYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKINLKEEGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +IQ+++  G+AYE+N ++ F+     + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIQSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L       + +
Sbjct: 234 PHHENEMAQSKCGCGG-TFAKYWMHNGYININGEKMSKSSGSFVLLRDIL-------KYF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIRL +L +HYR+P++F+   L + +  L +   T      +D              
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENIKGIDDCQELL 345

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------ 389
                     + A+  D NT  A+  + +L +   K  D   I                 
Sbjct: 346 ATKKEMEAKFIEAMNEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLVM 405

Query: 390 ---HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|329666764|gb|AEB92712.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 470

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 170/493 (34%), Positives = 250/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 1   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH        +  +  +  + F++DT  L     T  PR
Sbjct: 60  -VNYVSNFTDVDDKMINEARKEHT------TVEKLAERYIKAFMEDTEALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q++I  G AYE +  + +     PNYG  S + I E + G        
Sbjct: 113 ATHEIKEIIDFVQDLIDKGFAYEVDGNVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +     KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +     V+R  M    YR PI+++   L +AE +L ++  T  +              
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLDDENERLED 344

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
                         + A+ +D N  +A+  ++ LA     +                +  
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKLLI 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+   +E         IEKL+ +R    K K ++ +D +R +L++KG ++ED  
Sbjct: 405 AWLEIFGVSFKEEQAEN--DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIEDT- 461

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW +
Sbjct: 462 -----PQGTRWHR 469


>gi|283852945|ref|ZP_06370204.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571635|gb|EFC19636.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 485

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 174/499 (34%), Positives = 245/499 (49%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT+ R    F +  P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   E 
Sbjct: 1   MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII++A  E          + I  +    F +D  RL  L    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKKANSEGA------TSAEIAERYIAAFYEDMDRLGILRADAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I +M  +   +I +GHAY   + ++ F   S   YG  S R +++ + G RV    
Sbjct: 113 ATEYIAEMADMAARLIENGHAYRTPSGDVYFRVRSFDGYGKLSGRDVEDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP W+SP+G GRPGWH+ECS MS   LG   DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +     W+HNGF+ +   KMSKS GNF+TI  + E        + 
Sbjct: 233 HHENEIAQSEAATGSD-FCRFWVHNGFVRINTEKMSKSLGNFVTIRTIYER-------YL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------PQTS 341
             V+R  ++ +HYR P+D++ Q L EAE  + +                       P+  
Sbjct: 285 PEVLRFFLVSSHYRSPLDYSDQALDEAEKGIKRIYAAKGQMEQALTRAKWSETKLPPEIG 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                ++     A+ +DLNT  AI  +  L R + +  D                +L   
Sbjct: 345 QELNKLEEGFTGAMDDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAAEALGRILADL 404

Query: 386 NASAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRK 433
           +  + ILG+      E   E     +      +  ++ LV ER    K K F+ +D IR 
Sbjct: 405 DTWSGILGVFGRDSREFLAELKASRLARLGIDAARVDGLVAERQEARKTKDFARSDAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L   G  + D        
Sbjct: 465 ELAGLGVTVMDTPAGPQWD 483


>gi|254411359|ref|ZP_05025136.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196181860|gb|EDX76847.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 482

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 169/501 (33%), Positives = 245/501 (48%), Gaps = 64/501 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  I+   +RMY CG T YD+ H+G+AR  I++D   R L++   
Sbjct: 1   MTLTLYNTLTRRKEPFSPIEAGKVRMYCCGITAYDYCHLGHARTCIIWDTARRYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV+N TDIDDKI+ RARQE        ++  ++ +  Q + +D  RL        
Sbjct: 61  D--VNYVQNFTDIDDKILNRARQE------GTSMEAVSERFIQAYFEDMARLNVDEADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  LI ++    +AY A  ++ +       YG  S RK+++ + G      
Sbjct: 113 PRATHCLDGIKRLIYDLEQKNYAYPAAGDVYYAVRRFGEYGKLSGRKLEDLQAGASGRVE 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E   KK+  DF LWK S P EP WESPWG GRPGWHIECSAM    LG   DIH G
Sbjct: 173 VADAEAGKKKDAFDFALWKGSKPGEPAWESPWGAGRPGWHIECSAMIRDNLGDTVDIHAG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS      +  A  W+H G + + G KMSKS GNFITI +LL+   
Sbjct: 233 GSDLVFPHHENEIAQSEAVTG-QPLARYWLHTGMVIVNGEKMSKSLGNFITIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
              R+     +RL +L   YR+P+DFT + L  A                      W  +
Sbjct: 289 ---RATDPMAVRLFVLQAQYRKPLDFTDEALAAATNGWHTLKDGLLFGDQYGEQLGWQDS 345

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
              +  +     +A+ +D N    +  L +LA++  +  ++L                  
Sbjct: 346 DKRQTAVLERFQAAVDDDFNFAEGLAVLFELAKDLGREGNILVHEGKTRTSPQELEAQWQ 405

Query: 384 IFNASAHILGIEVCKEHLNKN-----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                A + G+EV  E +++          IE L+Q+R    K K F  +D IR +L+++
Sbjct: 406 TLVELAQVFGLEVQGEEISQESTSGLSDAEIEALIQQRSSARKRKDFEMSDRIRDELKAQ 465

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G  L D         +TRW +
Sbjct: 466 GITLIDQSGG-----VTRWHR 481


>gi|193211882|ref|YP_001997835.1| cysteinyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
 gi|193085359|gb|ACF10635.1| cysteinyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
          Length = 488

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 165/500 (33%), Positives = 244/500 (48%), Gaps = 54/500 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + IYN+L RK   F+ I P    +YVCGPTVY  AH+G+A+  + FDV+ R LR+ 
Sbjct: 1   MPSSLHIYNSLTRKKEPFEPIQPGLATIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHV 60

Query: 61  Y--GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
                  V YV+NITD+    DD      + +  +         +    T+ F +D  RL
Sbjct: 61  GEQQGYKVRYVQNITDVGHLTDDADEGEDKIQKQARQERIEPMEVAQFYTRSFYEDMDRL 120

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQ 173
               P   P AT HIP+ I L++ ++  GHAYE+N  + FD +S   YG  S R   +  
Sbjct: 121 GVERPNIAPTATGHIPEQIALVERLVETGHAYESNGNVYFDVNSFAGYGKLSGRTDQEAL 180

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           + G RV E+  K+NP+DF LWK++ P     W+SPWG G PGWH+ECSAM+  YLG   D
Sbjct: 181 QSGGRVAERSDKRNPSDFALWKKAEPSHIMKWQSPWGEGYPGWHLECSAMAMKYLGDTID 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG++  FPHH+ EIAQS  A   +     W+HN  + ++G KM KS  NF+ + EL 
Sbjct: 241 IHGGGMENKFPHHDCEIAQSEAATG-KPFVRYWMHNNMVTVDGVKMGKSLKNFVNLKELF 299

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKG 345
            T       +   VIR  +L +HYR P+DF+   +  ++    K  +T       +  KG
Sbjct: 300 GT-------FDPLVIRFFILQSHYRSPLDFSEAAIKASQSGFEKLQETYKRLVESAEDKG 352

Query: 346 IIDPA-----VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNAS 388
            ++ A     +  AL +D NT  AI  L +  +      D               +   +
Sbjct: 353 QLEVATFEQKITDALNDDFNTPVAIAVLFEFIKALNGALDKGGLDAASKAAALALLATYA 412

Query: 389 AHILGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
             +LGI   +  L         + +   ++ L++ R      K F+++D IR  L  +G 
Sbjct: 413 GEVLGILKSRNELLAGESGESAQTLDDVMQVLLELRKEARANKDFATSDKIRDLLMERGI 472

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            ++D K          W +K
Sbjct: 473 EVKDTK------EGATWTKK 486


>gi|325689003|gb|EGD31011.1| cysteine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 447

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 170/468 (36%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPKEVADKYIAAFREDVTTLGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  ++ ++  G+AYE+  ++ F      +Y   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTNEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +A   L     T      G  D           
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+          +   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 476

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 168/480 (35%), Positives = 239/480 (49%), Gaps = 54/480 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    ++MYVCGPTVYD  H G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKPLTEKEVKMYVCGPTVYDHTHFGHGRTYVSFDIIRRYLEHIGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA ++  +         ++ +    F+ D   L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRANEKGKN------PQELSEQFINVFLNDMATLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HIP++I  I+ +I  G AY+  N + F+     NYG  S   +++   G R+     
Sbjct: 114 VTEHIPEIIAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLYSGVRIETSEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK + P EP WESP+G GRPGWHIECSAMSS YLGK FDIHGGG DL FPH
Sbjct: 174 KKNPEDFALWKTAKPREPKWESPFGEGRPGWHIECSAMSSKYLGKQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI ++        + +  
Sbjct: 234 HENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEDI-------SKEYDP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            ++R   +  HYR PID+T + +T  +  L K      +                     
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESMTHVKNNLEKIYNVIENIRISLEKSKKSGAWGENEFLL 345

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------------FNAS 388
                        A+ +D NTV A++++ +++    K   L+              F   
Sbjct: 346 YDILKNSKHNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVETPSEGLLLKAFDFFKIV 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     K     N    I+ L++ R  L   K +  +D IR  L++ G+++ED  
Sbjct: 406 GEIFGLFENYFKTSSESNDEEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNIGYLIEDNP 465


>gi|254302121|ref|ZP_04969479.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322313|gb|EDK87563.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 473

 Score =  547 bits (1409), Expect = e-153,   Method: Composition-based stats.
 Identities = 178/492 (36%), Positives = 271/492 (55%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ +  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT+++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT +I +MI +I++++  G+AYE+N ++ F+     + YG  S++ I++ + G R+   
Sbjct: 114 KATENINEMIEIIKSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G+KMSKS+G+FI + ++L       + +
Sbjct: 234 PHHENEMAQSKCGCGG-TFARYWMHNGYININGQKMSKSSGSFILLRDIL-------KHF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIRL +L +HYR+P++F+   L + +  L +   T      +D              
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENLKGTDDCQDLL 345

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL-------LPIFNA------- 387
                     + A+  D NT  A+  + +L +   K  D        L + N        
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEVNISEKGLEVINEVYSYLVM 405

Query: 388 -SAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E  +N   +  IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|15900500|ref|NP_345104.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657664|ref|ZP_01408394.1| hypothetical protein SpneT_02001141 [Streptococcus pneumoniae
           TIGR4]
 gi|149005703|ref|ZP_01829442.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|149021553|ref|ZP_01835608.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|168490519|ref|ZP_02714662.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|168576506|ref|ZP_02722380.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225858428|ref|YP_002739938.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225860592|ref|YP_002742101.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298230928|ref|ZP_06964609.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298254670|ref|ZP_06978256.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502386|ref|YP_003724326.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|307126794|ref|YP_003878825.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|21264019|sp|Q97S25|SYC_STRPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|14972066|gb|AAK74744.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147762643|gb|EDK69603.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147930249|gb|EDK81234.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|183575011|gb|EDT95539.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183577730|gb|EDT98258.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|225720814|gb|ACO16668.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225728330|gb|ACO24181.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237981|gb|ADI69112.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|306483856|gb|ADM90725.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|327390330|gb|EGE88671.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
 gi|332077024|gb|EGI87486.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 447

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|320547739|ref|ZP_08042023.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447499|gb|EFW88258.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 448

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 162/470 (34%), Positives = 247/470 (52%), Gaps = 39/470 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKIY+T+ R + EF  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y   
Sbjct: 1   MTIKIYDTMTRSLREFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+ N TD+DDKII+ A +              + K    F++D   L     T  
Sbjct: 61  K--VNYISNFTDVDDKIIKGAAE------AGMDTKAFSDKFIAAFMEDVKELGVEPATKN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---V 179
           PR   ++ ++I  +++++  G AYEAN ++ F  +   NY   + + +++ ++G      
Sbjct: 113 PRVIEYMDEIIAFVKDLVDKGFAYEANGDVYFRVAKSKNYAKLANKTLEDLEVGASGRVD 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K+NP DF LWK + P E  W+SPWG+GRPGWHIECS M++  LG   DIHGGG D
Sbjct: 173 GEGDIKENPLDFALWKSAKPGEVSWQSPWGQGRPGWHIECSVMATSILGDTIDIHGGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T     
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV---- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
                 V+R  +    YR+P++FT + + +A + L     T          +        
Sbjct: 288 ---DGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPVGEVADAAELAKFKD 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
              +A+ +D NT + I  +  +A+       +  +   F     + GI   +E L+ +  
Sbjct: 345 DFETAMDDDFNTANGITVIFDMAKWINSGNYDQTVKDTFAKMLAVFGIVFEEEVLDAD-- 402

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             +E L+ +R      + F++AD IR QL  +G  L D K+   G R TR
Sbjct: 403 --VEALIAKRQEARANRDFATADAIRDQLAVQGIKLLDTKD---GVRWTR 447


>gi|90021548|ref|YP_527375.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|109894935|sp|Q21JG6|SYC_SACD2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89951148|gb|ABD81163.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 459

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 193/479 (40%), Positives = 271/479 (56%), Gaps = 43/479 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNT  RK   F  ++P +I+MYVCGPTVY+  HIGNARP++VFDVL+R+L+  Y 
Sbjct: 1   MSLTVYNTRTRKKEPFVPVNPQSIKMYVCGPTVYNLVHIGNARPVVVFDVLFRVLKTLYP 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y RNITDIDDKI++ A++        ++IS +T++ T+ +++D   L  L P+  
Sbjct: 61  E--VVYARNITDIDDKIMKAAKEN------GESISALTARFTEAYIEDMAALHNLPPSIA 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  MI ++  ++  GHAYEA+  ++FD  S+ NYG  S R +++   G RV   
Sbjct: 113 PKATAHIEPMIAMVAALVEKGHAYEADGHVLFDVQSMKNYGKLSNRALEDMLDGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+   DF+LWK S   EPGW SPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIF
Sbjct: 173 DYKRYAGDFVLWKPSADDEPGWASPWGRGRPGWHLECSAMIETHLGNTIDIHGGGRDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA   E+    W+HNG++N++G KMSKS GNF T+ +LL       + +
Sbjct: 233 PHHENELAQSECAHGGEEYVRYWMHNGYVNIDGEKMSKSLGNFRTVRDLL-------QQY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
               IR A+L   YR  +DF+V  L +++  L              + +  + D A   A
Sbjct: 286 HGETIRFALLSAQYRSELDFSVSLLDQSKAGLDTLYGALKNAPATSTDAVDLSDNAGYLA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG--------------IEVCKEH 400
           L +DLNT   I  LH+LA+   KN        A+                    +     
Sbjct: 346 LLDDLNTPQVIAELHRLAKIVNKNEGQEAAIAAAQLQALGGLLGLLQQEPEAWFKATTSG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            ++  +  IE+L+ ER      K ++ AD IRK+L  KG  LED  +       T WK+
Sbjct: 406 SSELSAEDIEQLIVERKDAKLAKNYARADEIRKELTEKGIALEDSAS------GTSWKR 458


>gi|288904445|ref|YP_003429666.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325977441|ref|YP_004287157.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288731170|emb|CBI12718.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325177369|emb|CBZ47413.1| cysS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 448

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 163/470 (34%), Positives = 248/470 (52%), Gaps = 39/470 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y   
Sbjct: 1   MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+ N TD+DDKII+ A +              + K    F++D  +L     T  
Sbjct: 61  K--VNYISNFTDVDDKIIKGAAE------AGMDTKAFSDKFIAAFMEDVKQLGVKPATKN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---V 179
           PR  +++ ++I  ++ ++  G AYEAN ++ F  +   NY   + + + + ++G      
Sbjct: 113 PRVIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVD 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG D
Sbjct: 173 GEGEIKENPLDFALWKSAHPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L       
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
           ++    V+R  +    YR+P++FT + + +A + L     T          +        
Sbjct: 285 KNVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
              +A+ +D NT + I  +  +A+       N  +   F     + GI   +E L+ +  
Sbjct: 345 DFEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEEVLDAD-- 402

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE L+++R      K F++AD IR QL ++G  L D K+   G R TR
Sbjct: 403 --IEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTKD---GVRWTR 447


>gi|121605784|ref|YP_983113.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|187629840|sp|A1VRB4|SYC_POLNA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120594753|gb|ABM38192.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 463

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 252/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + +F  + P  +RMYVCG T+YD  HIG+AR M+ FDV+ R L+    
Sbjct: 1   MSLRIYNTLSRAVEDFSPLVPGQVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITDIDDKII+RA      +     I  +T +      +D   L    PT +
Sbjct: 61  E--VRYVRNITDIDDKIIKRA------VERGITIRALTDEMIAAMHQDIGALGIEPPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY  ++ ++ +     P YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLAMIGKLEEKGLAYRGSSGDMNYAVRKFPGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWES-----PWGRGRPGWHIECSAMSSHYLGKVFDI 233
              K +P DF+LWK +   EP    W+S      +G+GRPGWHIECSAMS   LG+ FDI
Sbjct: 173 LEGKDDPLDFVLWKSAKESEPEDAKWDSAALGHDYGKGRPGWHIECSAMSCQTLGETFDI 232

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG DL FPHHENEIAQS  A+  +  A  W+HNGF+ ++  KMSKS GNF TI ++L 
Sbjct: 233 HGGGADLQFPHHENEIAQSEGANG-KPLARFWVHNGFVRVDNEKMSKSLGNFFTIRDVL- 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDP 349
                 + + A  IR  ++  HYR  ++++   L +A   L +              ID 
Sbjct: 291 ------QKYDAETIRFFIIRAHYRSALNYSDAHLDDARNSLKRLYTALALVAPATVEIDW 344

Query: 350 A------VLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCK--- 398
           A        +A+  D  T  AI  L +LA E  K H      +  +    LG+   +   
Sbjct: 345 ADPFAARFKAAMDEDFGTPEAIAVLFELAGEVNKTHSAERAGLLKSLGACLGLLQGEPSA 404

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             +        AI+ L+ +R    K + F++AD IR +L  +G +L+D          T 
Sbjct: 405 YLQAGAGLDDAAIQALITQRADAKKARDFAAADRIRTELLGQGIVLKDS------PLGTT 458

Query: 457 WKQK 460
           W+ +
Sbjct: 459 WEVQ 462


>gi|187928101|ref|YP_001898588.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|229558781|sp|B2U9P8|SYC_RALPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187724991|gb|ACD26156.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 463

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 181/482 (37%), Positives = 262/482 (54%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + +S +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETMSALTGRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG+ FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N+W+HNGF+ +   KMSKS GNF TI ++L      
Sbjct: 234 DLQFPHHENEIAQSEGATG-KTFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            + + A V+R  +L +HYR  ++++   L +A   L++             A        
Sbjct: 287 -KVYDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSESH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEH----- 400
               L A+ +D NT  A+  L +LA E  K    +L     A A ++G+     H     
Sbjct: 346 GKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVIGLLGRDPHVFLQG 405

Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +   +  +E  ++ER      + F+ AD IR  L + G +LED         +T W
Sbjct: 406 GVSADGVDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLEDKPGG-----LTEW 460

Query: 458 KQ 459
           ++
Sbjct: 461 RR 462


>gi|312865434|ref|ZP_07725661.1| cysteine--tRNA ligase [Streptococcus downei F0415]
 gi|311098952|gb|EFQ57169.1| cysteine--tRNA ligase [Streptococcus downei F0415]
          Length = 447

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 165/465 (35%), Positives = 245/465 (52%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +    + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRDFVPLHEGQVNMYVCGPTVYNYIHIGNARSSVAFDTIRRYFEYAGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++       + +   + +K    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAAKE------ADMSPKDLAAKFIAAFMEDTKALGIKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + + Q+I  +Q ++  G AYEA  ++ F      NY + + + + + ++G       E
Sbjct: 114 VMDFMDQIIDFVQVLMDKGFAYEAGGDVYFRVQKSHNYAALANKTLADLEVGASGRTDSE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TELKEDPLDFALWKSAKLGEISWDSPWGAGRPGWHIECSVMSTTILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T+++LL+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIID---PAV 351
               V+R  +   HYR+PI+FT + + +A+  L     T T        +  +D      
Sbjct: 287 -DGQVLRFFLATQHYRKPINFTDKAIHDAKANLKYLKNTYTLPLDEQSDQADLDKFLADF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I  +  LA+     H    +   F     + GI   +E L+      
Sbjct: 346 KTAMDDDFNAANGITVIFDLAKWINSGHYNQAIKDAFAKMLEVFGIVFQEESLDS----E 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+++R      K F++AD IR  L ++G  L D K+     R
Sbjct: 402 IEALIKKRQAARAAKDFATADKIRDDLAAQGIKLLDTKDGVRWTR 446


>gi|307274057|ref|ZP_07555267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|306509365|gb|EFM78425.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 478

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 169/492 (34%), Positives = 249/492 (50%), Gaps = 56/492 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  IKIYNTL R+   F  I+   +RMYVCGPTVY++ HIGNAR  I FD + R   Y  
Sbjct: 7   KGMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV N TD+DDKII+ A++      +      +  +  + F +DT  L     T 
Sbjct: 67  YE--VNYVSNFTDVDDKIIKAAKE------LKITAPEVAERFIKAFEEDTQALNVQPATL 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR  +H+P ++  I  +I  G AYE   ++ + T   PNYG  S + IDE ++G     
Sbjct: 119 HPRVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178

Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   E  W+SPWG+GRPGWHIECS M++ +LG+  DIHGGG 
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
           DL FPHHENEIAQS         AN W+HNG++ +  +  KMSKS GNFIT++E++    
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              +     ++R  M  T YR PI ++   L EA     K                    
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHI 391
                      ++   ++ + +D N  + I  +++LA+   +  +      P+  A   +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410

Query: 392 ----LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               L I        + +   ++ L++ER    K + F+ +D IR  L+ +G +LED   
Sbjct: 411 FSGWLAIFCLFFKNEELVDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT-- 468

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 469 ----PQGTRWRR 476


>gi|71904305|ref|YP_281108.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|109894951|sp|Q48RA7|SYC_STRPM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71803400|gb|AAX72753.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 447

 Score =  546 bits (1408), Expect = e-153,   Method: Composition-based stats.
 Identities = 161/465 (34%), Positives = 239/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F+ AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFAIADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|256848164|ref|ZP_05553608.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715224|gb|EEU30201.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 469

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 163/492 (33%), Positives = 254/492 (51%), Gaps = 60/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R   EF  + P  + MYVCGPTVY++ HIGNAR  I FD + R L +     
Sbjct: 2   LKIYNTLTRTKEEFHPVHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFIGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ AR++         +  +  K  + F++DTT +     T  PR
Sbjct: 60  HVNYVSNFTDVDDKMIKAAREQ------EITVPELADKYIRAFLEDTTAVNIEPATMHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT++IP++I  IQ +I  G+AY  + ++ +      +YG  S + ID+ ++G        
Sbjct: 114 ATDNIPEIIKFIQRLIQRGYAYAVDGDVYYRARKFKHYGQLSGQSIDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K +P DF LWK + P E  W+SPWG GRPGWHIECS MS+ YL    DIH GG DL
Sbjct: 174 EVNKKADPMDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTKYLADTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS  A   +K  N W+HNGF+ +  +  KMSKS  NF+T+++++      
Sbjct: 234 EFPHHENEIAQSEAATG-KKFVNYWMHNGFVTIGKDNEKMSKSLHNFVTVHDII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
            +     V+R  M  T YR PI ++   L +A+  L+                       
Sbjct: 287 -KHVDPQVLRFFMATTQYRRPIQYSEDNLVDAQNNLAHIQTAFNNLEYRKNDATDGDDTT 345

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
            +        + + A+ +D+N  + I  +++L + + +  +           +  +    
Sbjct: 346 VANQLATFRSSFIEAMDDDINVQNGIAVVYELVKFANRYTEKETVAKDAIGNIQKLLKEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+++      +     I++L+ +R    + K F+ +D IR  L+++G I+ED    
Sbjct: 406 LLIFGVKLT--ATGQIDDETIKQLIAKRDEARRQKNFALSDQIRDDLKAQGIIIEDT--- 460

Query: 449 DNGQRMTRWKQK 460
               + TR++++
Sbjct: 461 ---PQGTRYRKE 469


>gi|328944848|gb|EGG39008.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 447

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 167/465 (35%), Positives = 241/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D + L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      HYR+PI+FT + + +A   L     T      G  D           
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAEVKVAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE+L+ ER      + F++AD IR +L ++G  L D K+     R
Sbjct: 402 IERLIDERQEARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446


>gi|229074151|ref|ZP_04207197.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708921|gb|EEL61048.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 449

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 167/472 (35%), Positives = 244/472 (51%), Gaps = 57/472 (12%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   E  V YV N TD+DDK+
Sbjct: 2   PLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYE--VQYVSNFTDVDDKL 59

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           I+ A +      + + +  I  +  + + +D T L C   T  PR T ++  +I  IQ +
Sbjct: 60  IKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQEL 113

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
           +  G+AYE+  ++ F T     YG  S + I + + G R+     K++P DF LWK +  
Sbjct: 114 VNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKE 173

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +
Sbjct: 174 GEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-K 232

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  W+HNG++N++  KMSKS GNFI +++++       + +   +IR  ML  HYR P
Sbjct: 233 TFARYWMHNGYINIDNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHP 285

Query: 320 IDFTVQRLTEAEILLSKWPQT---------------------STSKGIIDPAVLSALYND 358
           I+F+ + L      L +                                  A   A+ +D
Sbjct: 286 INFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKWLAEMEKFQAAFEEAMDDD 345

Query: 359 LNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISI 407
            NT +AI  L+ +A  + +               +        ILG+E+ KE L   +  
Sbjct: 346 FNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELAKEEL---LDE 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IE L+Q+R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 403 EIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 448


>gi|324989717|gb|EGC21660.1| cysteine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 447

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 171/468 (36%), Positives = 242/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R +  F  I    + MYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLRNFVPITEKTVNMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIINRAKEE------GITPKEVADKYIAAFREDVTALGVKPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLVDLELGASGRTDDE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+          +   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|193214317|ref|YP_001995516.1| cysteinyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
 gi|193087794|gb|ACF13069.1| cysteinyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
          Length = 489

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 169/496 (34%), Positives = 243/496 (48%), Gaps = 60/496 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +   ++IYNTL RK   F+ +    + +YVCGPTVY  +H+G+A+  + FDV+ R LR  
Sbjct: 8   ISMSLQIYNTLTRKKEIFEPLVDGRVSLYVCGPTVYGHSHLGHAKSYVSFDVVARWLRQL 67

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YV+NITD+          DDKII +A++EH           +     + F  D
Sbjct: 68  GYK--VKYVQNITDVGHLTDDADEGDDKIIAQAKREH------IDPMEVAQFYARSFFAD 119

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-K 169
              L    P   P AT HIP+ I LI+ +I   HAYE N  + FD +S   YG  S R  
Sbjct: 120 MDALGNQRPNISPTATGHIPEQIALIEQLIEKNHAYEVNGNVYFDVASFEGYGKLSGRIN 179

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
            +E + G RV  +  K++PADF LWK++ P     W SPWG G PGWHIECSAMS  YLG
Sbjct: 180 QEELEAGARVEVRSEKRHPADFALWKKAEPNHLMKWASPWGVGYPGWHIECSAMSMKYLG 239

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + FDIHGGGL+  FPHH+ EIAQS CA   +     W+HN  + + G+KM KS GN I++
Sbjct: 240 ETFDIHGGGLENQFPHHDCEIAQSECATG-KPFVRYWMHNNMVTVNGQKMGKSLGNSISL 298

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII- 347
            ++        + +P  VIR  +L +HYR  +DF+   +  A+  L K  +++       
Sbjct: 299 KDIF-------KKFPPVVIRFFILQSHYRSTLDFSDAAIEAAQTGLKKLQESAARLNEAQ 351

Query: 348 -----------DPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIF 385
                      +     A+ +D N   AI  L  LARE                +    F
Sbjct: 352 AGKTDLDLAPYEQRFTDAMNDDFNAPMAIAVLFDLAREINSALAADGLSATSLENAKAFF 411

Query: 386 NASA-HILGIE--------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              A  +LGI            +   + +   +  +++ R    K K F++AD IR  L 
Sbjct: 412 ETYANGVLGILSTAGESDAAGSDKDKERLEGVMALVLELRQAARKNKDFATADKIRDGLT 471

Query: 437 SKGFILEDYKNPDNGQ 452
             G  ++D K+    +
Sbjct: 472 GIGIEVKDTKDGAIWK 487


>gi|256852089|ref|ZP_05557476.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661341|ref|ZP_05862254.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934881|ref|ZP_06340113.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297205036|ref|ZP_06922432.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|256615501|gb|EEU20691.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260547796|gb|EEX23773.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301062|gb|EFA93374.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|297149614|gb|EFH29911.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 473

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 173/494 (35%), Positives = 249/494 (50%), Gaps = 61/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 1   MKIYNTLTRQKEEFKPLVPGKVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E         +  +  +    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAE------GITVPELAKRYINAFMEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
           AT  I  +I  I+++I  G AYE + ++ +       YG  S + I   + G        
Sbjct: 113 ATEEIKDIIAFIKDLIEKGFAYEVDGDVYYRAKKFNGYGKLSDQDIASLEEGASEHVNEA 172

Query: 184 ---HKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               K++P DF LWK+     E  WESPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EFAKKEDPIDFALWKKQKQSDEIAWESPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR+PI+++ + L +A I+L K   T                 
Sbjct: 287 --KRVDPQVLRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLQDTDSQENK 344

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
             + +    +     A+ +D N  +A+  ++ L     KN              L     
Sbjct: 345 ALAVAIEDSENRFKEAMDDDFNVQNALSVVYDLLPIINKNISESTSDLSNLKQFLQHLEN 404

Query: 388 SAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
              I G+++ K    K  +    IE+LV++R    K K F+++D IR QL +   +L+D 
Sbjct: 405 WMAIFGVDIHKLTAEKVSDDDSEIEELVKKRDEARKHKDFATSDAIRDQLAAMNIVLQDT 464

Query: 446 KNPDNGQRMTRWKQ 459
                  + T+W++
Sbjct: 465 ------PKGTKWRR 472


>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
          Length = 480

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 180/479 (37%), Positives = 252/479 (52%), Gaps = 47/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +      +  S I MYVCG TVYD  H+G+AR  + FD++ R LR+   + 
Sbjct: 22  IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD- 80

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RAR         +    +T +   +   D  +L  L P  +PR
Sbjct: 81  -VTFVRNITDIDDKIIQRARD------TGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 133

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIPQ+I +I+ ++    AY A N +++F T+S   YG  S + I   + GTR+    
Sbjct: 134 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNE 193

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG  FDIHGGG DLIFP
Sbjct: 194 YKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFP 253

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H G + +   KMSKS  NF T+ ++L         + 
Sbjct: 254 HHENEIAQSTSANDG-PYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNR-------FD 305

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSAL 355
           A  +R  +L  HYR+P++++ + +  A   L++            S            A+
Sbjct: 306 AQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDAWRARFCEAM 365

Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNIS 406
            +D NT  A+  L +L RE  +           L        ++LG +E   +   KN S
Sbjct: 366 DDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKNRS 425

Query: 407 I-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                    IEKL+ +R    +M K+  AD +R +L  +G  LED          T W+
Sbjct: 426 DLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDV------GENTSWR 478


>gi|323126489|gb|ADX23786.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 447

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 165/468 (35%), Positives = 240/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  +    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPLTEKTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q         +   ++ +    F++DT  L     T  PR
Sbjct: 60  RVNYISNFTDVDDKIIKAAAQ------AGVSPKELSDRFIAAFMEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G AYE   ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYMTEIISFVQVLIEKGFAYEVAGDVYFRVEKSEHYAQLANKTLSELEVGASGRTDVE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TSLKENPLDFALWKSAKTGEVSWDSPWGSGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R  +    YR+PI+FT + + +AEI L     T                   A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETANEQELKRFVTAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L+ +    
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGFYTGMVKEAFEKILAVFGIVFEEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ +R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|227894572|ref|ZP_04012377.1| cys-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227863731|gb|EEJ71152.1| cys-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 477

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 174/495 (35%), Positives = 256/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYK- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINEIINFVKVLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------- 342
             +     V+R  M    YR  I+++ + L +A  +L ++  T T               
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNIDYRLDDNTASEKS 347

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
                +    D   ++A+ +D N  +A+ A++ L       A     + D L  F     
Sbjct: 348 SELVKAIEDTDQKFIAAMDDDFNVQNALTAVYDLLSVVNANANSKKADKDALKQFEEKLT 407

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   I G++  K       +    IE LV++R      K ++++D +R QL+  G  ++D
Sbjct: 408 AWLLIFGVDTNKLCAQNTGSNDDEIEALVKKRDEARANKDWATSDQLRDQLKEMGITIQD 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 468 T------PQGTRWTR 476


>gi|251781692|ref|YP_002995994.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390321|dbj|BAH80780.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 447

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 165/468 (35%), Positives = 240/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  +    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPLTEKTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A Q         +   ++ +    F++DT  L     T  PR
Sbjct: 60  RVNYISNFTDVDDKIIKAAAQ------AGVSPKELSDRFIAAFMEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G AYE   ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYMTEIISFVQVLIGKGFAYEVAGDVYFRVEKSEHYAQLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TSLKENPLDFALWKSAKTGEVSWDSPWGSGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R  +    YR+PI+FT + + +AEI L     T                   A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETANEQELKRFVTAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---LLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L+ +    
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTGMVKEAFEKILAVFGIVFEEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ +R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|28377486|ref|NP_784378.1| cysteine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|38258341|sp|Q88YX9|SYC_LACPL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28270318|emb|CAD63219.1| cysteine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 470

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 178/479 (37%), Positives = 257/479 (53%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++NTL R+   F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   LSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYCGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+RA ++H ++P       +  +  + F++DTT +     T  PR
Sbjct: 60  HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPATVHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           A+ +IP++I  +Q +I  G+AYE+  ++ +       YG  S ++ID+ ++G        
Sbjct: 114 ASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHTADE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  WESPWG GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +  AN W+HNGF+ +  +  KMSKS GNF+T++++++T    
Sbjct: 234 EFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDIIKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGIIDPA 350
                  V+R  M  T YR PI +T   L EA   L K              +    D A
Sbjct: 290 ----DPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNGTDTA 345

Query: 351 VLS-----------ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHI 391
           V             A+ +D N  + + A+++LA+ +         +   L+ +  A   +
Sbjct: 346 VAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQKALVQL 405

Query: 392 LGI-EVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            G+  V  E  N  +   AI+ L+ ER    K K F+ AD IR  L+ +G +LED    
Sbjct: 406 TGVFGVTFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKVQGIMLEDTPQG 464


>gi|328958761|ref|YP_004376147.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328675085|gb|AEB31131.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 468

 Score =  546 bits (1407), Expect = e-153,   Method: Composition-based stats.
 Identities = 165/491 (33%), Positives = 245/491 (49%), Gaps = 61/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF  I+   ++MYVCGPTVY++ HIGNAR  + FD + R L Y   + 
Sbjct: 2   LKIYNTLTREKEEFVPIEEGKVKMYVCGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A++      ++ +   +  K  + + +DT  L     TH PR
Sbjct: 61  -VAYISNFTDVDDKIIRTAKE------LDLSAQEVADKFIEAYHEDTHALGVEKATHHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
              ++P+++  I  +I  G+AYE   ++ + T    +YG  S   IDE ++G      V 
Sbjct: 114 VMENMPEIVDFIAVLINKGYAYEVEGDVYYRTRKFKDYGKLSDISIDELEVGASNRLTVQ 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   E  WESPWG GRPGWHIECS M++ YLG   DIH GG DL
Sbjct: 174 ENNKKEDPLDFALWKSAKAEEISWESPWGAGRPGWHIECSVMATKYLGDTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS         A+ W+HNGF+ ++  KMSKS GN + +++++       +
Sbjct: 234 TFPHHENEIAQSEAKTG-HPFAHYWMHNGFVTMDNEKMSKSIGNVVLVHDII-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------- 344
                ++R  M  T YR PI +    + EA   LSK      +                 
Sbjct: 286 QVDPQIVRFFMATTQYRRPISYNETTIEEARANLSKIKTAYDNAMYRLKDAVETETDDQE 345

Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                       +  + +D N+ + I  ++++A+      +           +L  F   
Sbjct: 346 QLNQFTSFKENFIKEMDDDFNSANGITVVYEMAKAMNIYSERSVVSKVVLEAMLDQFQEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I GI      L   +   IE+L+++R      K F  +D IR QL+ +G IL+D    
Sbjct: 406 VQIFGIAFAATEL---LDETIEQLIEDRNAARAEKNFQRSDEIRDQLKEEGIILDDT--- 459

Query: 449 DNGQRMTRWKQ 459
               + TRW++
Sbjct: 460 ---PQGTRWRR 467


>gi|182683526|ref|YP_001835273.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303253920|ref|ZP_07340041.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260086|ref|ZP_07346059.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261270|ref|ZP_07347218.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263935|ref|ZP_07349856.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265926|ref|ZP_07351822.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268308|ref|ZP_07354105.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|182628860|gb|ACB89808.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301801464|emb|CBW34156.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302599096|gb|EFL66121.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637404|gb|EFL67891.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638781|gb|EFL69243.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642146|gb|EFL72496.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644510|gb|EFL74761.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646340|gb|EFL76566.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 447

 Score =  545 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+ +    
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|166712436|ref|ZP_02243643.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 476

 Score =  545 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 195/496 (39%), Positives = 268/496 (54%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
             P   +R A+L  HYR+P+D++   + +A+  L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEACGSSGVEVSKT 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHILGIEVCKEH----- 400
               V SAL +DLNT  A+  +  +A E+     +L+    +SA +  +   +       
Sbjct: 346 IPVEVESALEDDLNTPLALSVIASIASEARALRNELVHAGESSARMSELHAVRAKLLGAG 405

Query: 401 -----------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             +      I  LVQER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDAGDDARITALVQERSAAKKGKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|94991232|ref|YP_599332.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544740|gb|ABF34788.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 447

 Score =  545 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 160/465 (34%), Positives = 239/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AY A+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYAADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADVIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|254514497|ref|ZP_05126558.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219676740|gb|EED33105.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 462

 Score =  545 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 202/479 (42%), Positives = 277/479 (57%), Gaps = 46/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT  R+   F  +DP  + MYVCGPTVY+ AHIGNARP++VFD L+RLL+ +Y   
Sbjct: 3   LQLYNTRARRKEAFDPVDPDCVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTHY--D 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKI+  A+++        AI +I  +  Q++ +DT +L  L PT +P 
Sbjct: 61  KVVYARNITDIDDKIMRAAQEQ------GVAIDVIAGEFAQKYREDTAQLNALPPTLEPH 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  MI L +++I   HAY A   ++FD +S+ +YG  S R +D+   G RV    +
Sbjct: 115 ATDNIGPMIALTESLIERNHAYAAEGHVLFDVTSMKDYGQLSGRSLDDMLAGARVEVAGY 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S+  EPGWESPWGR RPGWH+ECSAM   +LG   DIHGGG DLIFPH
Sbjct: 175 KRHPGDFVLWKPSSADEPGWESPWGRVRPGWHLECSAMIREHLGPTIDIHGGGRDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQSCCA   E    +W+HN FL+++G KMSKS GN  TI ELL         +  
Sbjct: 235 HENELAQSCCAFGDE-FVRVWMHNAFLDMDGEKMSKSLGNVATIRELLTR-------YRG 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLSAL 355
            V+R A+L  HYR P++F+   L +AE  L+ +  T  S   I+             +AL
Sbjct: 287 EVLRFALLSAHYRSPLNFSEALLEQAEQTLTSFYNTLRSVQGIELDCEVSLEGEGFYAAL 346

Query: 356 YNDLNTVSAIQALHKLARESTKNH-----DLLPIFNASAHILGIEVCKE----------H 400
            +DLNT  AI  LH LAR+  K        L     A+ ++LGI                
Sbjct: 347 CDDLNTPLAISELHVLARDINKASGSDKPALKARLLAAGNLLGILQQDPLEWLQGDGASD 406

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           L    + A+E L+ ER+     + ++ AD IR +L + G ILED          T W++
Sbjct: 407 LQGLDAEAVEALIAERVAAKANRDYARADEIRDELTAGGIILEDS------AGGTLWRR 459


>gi|94995145|ref|YP_603243.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548653|gb|ABF38699.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 447

 Score =  545 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 161/465 (34%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLHKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL ++G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446


>gi|58582301|ref|YP_201317.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84624181|ref|YP_451553.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|81311823|sp|Q5GZD9|SYC_XANOR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894962|sp|Q2P2E8|SYC_XANOM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58426895|gb|AAW75932.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84368121|dbj|BAE69279.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 476

 Score =  545 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 193/496 (38%), Positives = 264/496 (53%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
             P   +R A+L  HYR+P+D++   + +A   L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQATNTLDRLYGTLRDLAALEACGSSGVEVSKT 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHILGIEV------ 396
               V SAL +DLNT  A+  +  +A E+    + L          + +  +        
Sbjct: 346 IPVEVESALQDDLNTPLALSVIASIASEARALRNELVHGGEPSARMSELHAVRAKLLGAG 405

Query: 397 -------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             + +    I  LVQER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDADDDARITALVQERSAAKKAKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|166365576|ref|YP_001657849.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082070|sp|B0JJL5|SYC_MICAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166087949|dbj|BAG02657.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 480

 Score =  545 bits (1406), Expect = e-153,   Method: Composition-based stats.
 Identities = 166/499 (33%), Positives = 253/499 (50%), Gaps = 62/499 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  + P  + MY CG TVYD+ H+G+AR  +V+DV+ R L Y   
Sbjct: 1   MTLILYNTLSRREEPFTPLIPGIVSMYCCGITVYDYCHLGHARTCVVWDVVRRYLEYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y++N TDIDDKI+ RA+ EH        ++ +  +  + + +D  +L        
Sbjct: 61  K--VRYIQNFTDIDDKILNRAKNEHT------TMAAVAERFIEAYFEDMAKLGVRPADAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG------ 176
           PRAT+ +  +  L+  +   G+AY ++ ++ +      +YG  S RK+D+ + G      
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYPSDGDVYYSVRRFSDYGKLSGRKLDDLQAGASGRVE 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           T  PE   K++P DF LWK +   EP W+SPWG+GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 TDDPEAIKKQDPFDFALWKGAKSGEPSWDSPWGQGRPGWHIECSAMVKEQLGETIDIHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   +  A+ W+HNG + + G KMSKS GNFITI ELL    
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLAHYWLHNGMVKVAGEKMSKSLGNFITIRELLA--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STS 343
                +    +RL +L   YR+PIDF+ + L  A        +              + +
Sbjct: 289 ----KYDPLAVRLLILGAQYRKPIDFSDEGLQAATNGWHTLQEGLSFGYKHLPPDNPAIT 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------IFN 386
              ++     A+ +D N    +  L ++A+E  K  + L                     
Sbjct: 345 DQELENRFQEAVNHDFNFAGGLAVLFEIAKELRKEGNNLTHAGKTDSNLAQLAVKWHTLV 404

Query: 387 ASAHILGIEVCKEHLNKNIS-----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             + +LG+E+  +     +S       IE L+Q+R    K K ++ +D IR +L+++G  
Sbjct: 405 KLSRVLGLEMAADQGETPVSEGISAADIENLIQQRTEAKKAKNYAESDRIRAELKAQGIT 464

Query: 442 LEDYKNPDNGQRMTRWKQK 460
           L D         +T+W ++
Sbjct: 465 LIDQPGG-----VTKWLRE 478


>gi|291459364|ref|ZP_06598754.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291417963|gb|EFE91682.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 469

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 177/486 (36%), Positives = 249/486 (51%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+  +  EF+ I+   IRMYVCGPTVY+  HIGNARPMIVFD   R + Y     
Sbjct: 1   MRIYNTMSGRKEEFKPIEEGKIRMYVCGPTVYNLIHIGNARPMIVFDTFRRYMEYRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV N TD+DDKII++A +E        +   IT +   +  KD   L     +  PR
Sbjct: 59  RFNYVSNYTDVDDKIIQKANEE------GTSCQRITERYIGEVEKDMKALNIEPASAHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
           AT  I  MI LI  ++  G+AY ++   + ++T +  NYG  S + IDE + G R   V 
Sbjct: 113 ATEEISGMISLIAELVEKGYAYASDDGTVYYNTKAFRNYGELSHKNIDELQSGLRELKVS 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++PADF+LWK     EP W SPW  GRPGWH EC  M+  Y G   DIH GG DL
Sbjct: 173 GEEKKRSPADFVLWKPKKEGEPYWNSPWSEGRPGWHTECCVMAPKYCGGRLDIHAGGEDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ   A   E+ AN W+HN F+N++ +KMSKS GNF+T+ +++       +
Sbjct: 233 IFPHHENEIAQYEAAHG-ERFANYWMHNAFINIDHKKMSKSLGNFLTVRDVI-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------D 348
            W   V+R  ML  HYR P++F+ + +  A+  L +          +            +
Sbjct: 285 RWDPMVLRFYMLSAHYRNPLNFSAELMDSAKQSLERILTAVQRLRELSGRLSGEELLPGE 344

Query: 349 PAVLSA-----------LYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
             V  A           + +DLNT  AI A+ +L R +  +            +L     
Sbjct: 345 EKVREAAEEQRRNFNERMDDDLNTADAITAVFELVRIANSSVSEQSSAAICRYMLDTIVT 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI    E   + +   +E+L++ER    + K F  AD IR +L S G  L+D + 
Sbjct: 405 LLSVLGIRT--ERKEEKLDREVEELIEERQKAREKKDFKRADEIRDRLLSMGISLKDTRE 462

Query: 448 PDNGQR 453
                R
Sbjct: 463 GVKWSR 468


>gi|313635089|gb|EFS01438.1| cysteinyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 471

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 171/490 (34%), Positives = 253/490 (51%), Gaps = 57/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   + 
Sbjct: 3   IQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I+ A +   ++P       +  +    +  D  +L     +  PR
Sbjct: 62  -VKFVSNFTDVDDKLIKAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVNPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I LI  +I  G+AYE+  ++ F T    +YG  S + + E + G RV     
Sbjct: 115 VTENMDEIIQLINTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYNER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DLIFPH
Sbjct: 175 KQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE+EIAQS  A   +  AN W+HN FLN++G KMSKS GNFIT++++L       +    
Sbjct: 235 HEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDNDP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------PQT 340
            VIR  ML  HYR+PI      L +A+  L +                          + 
Sbjct: 287 NVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQDEW 346

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
                 +  A    + +D NT +AI   H+LA+ +               + L +    A
Sbjct: 347 LEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRLFA 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+++            +E L++ERL     + F+ AD IR  L+ K  ILE      
Sbjct: 407 EVLGLKLEYTQTESLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILE------ 460

Query: 450 NGQRMTRWKQ 459
              + TR+++
Sbjct: 461 XXXQGTRFRR 470


>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511828|sp|C6BS23|SYC_DESAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 485

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 174/498 (34%), Positives = 244/498 (48%), Gaps = 67/498 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF  ++ + + +Y CG T YD  HIG+AR  +VFD+L R LR+   + 
Sbjct: 1   MRLYNTLNRKKEEFVPLNGNKVNLYACGITAYDLCHIGHARSSVVFDILVRYLRFKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TDIDDKII RA +           + +  K   +F  D  +L  L    +P+
Sbjct: 60  -VTFVRNFTDIDDKIINRANE------TGVTSTELAEKFIGEFYVDMDKLNILRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+MI L Q +I   HAY   + ++ F   S  +YG  S R I++ + G R+    
Sbjct: 113 CTEHIPEMIELTQTLIEKDHAYATPSGDVYFKVRSFDDYGKLSGRNIEDLQSGARIQPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWH+ECSAMS  Y    FDIHGGG DL FP
Sbjct: 173 EKQDPLDFALWKAAKPGEPSWESPWGQGRPGWHLECSAMSEKYFELPFDIHGGGQDLSFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E  A  W+HNGF+ +   KMSKS GNF TI ++L+        + 
Sbjct: 233 HHENEIAQSEAATGKE-MARFWVHNGFVQINSEKMSKSLGNFFTIRDILD-------KFM 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------QTS 341
              +R  +L  HYR P+DF+ + L EAE  + +                        +  
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFEALEEAEKGIRRVYSALEQTAEALNKSKWSKAALPEEVL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                 +     A+ +D+NT  A+  +  L R + +  +                +L   
Sbjct: 345 AEIEDAEKGWADAMEDDMNTAGAMGHMFTLIRLAGRIGEEKSWRKSEGGRDAWIRILEDM 404

Query: 386 NASAHILGI------EVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LGI      E  +E               +E+LV  R    K K F+ +D IR 
Sbjct: 405 KKWGEVLGIFTRDPKEFLEELKLCMLERKGIEVAKVEELVAARQEARKNKDFARSDEIRD 464

Query: 434 QLESKGFILEDYKNPDNG 451
           +L   G  ++D       
Sbjct: 465 ELIELGVEVKDTPQGAVW 482


>gi|15675744|ref|NP_269918.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71911468|ref|YP_283018.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|21264023|sp|Q99XZ9|SYC_STRP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13622964|gb|AAK34639.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|71854250|gb|AAZ52273.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 447

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 160/465 (34%), Positives = 239/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + + +YVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRKFVPLTENTVNIYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A           +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAA------TQAGVSPKELSDRFIAAFIEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             ++I ++I  ++++I    AYEA+ ++ F      +Y   + + + E ++G       E
Sbjct: 114 VMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDP--------AV 351
               V+R  +    YR+PI+FT + + +AEI L     T         D         A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKTIHDAEINLKYLKNTLQQPLTETADEQELKQFVIAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L     + 
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEEVL----EVD 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IE L+ +R      + F++AD IR QL  +G  L D K+     R
Sbjct: 402 IEALIAKRQEARANRDFATADAIRDQLAVQGIKLLDTKDGVRWLR 446


>gi|148983973|ref|ZP_01817292.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|148992298|ref|ZP_01822021.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|149010789|ref|ZP_01832160.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168482827|ref|ZP_02707779.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|168488279|ref|ZP_02712478.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|168492751|ref|ZP_02716894.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|221231418|ref|YP_002510570.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225854126|ref|YP_002735638.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225856294|ref|YP_002737805.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|147765270|gb|EDK72199.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147924120|gb|EDK75232.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147928924|gb|EDK79936.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|172043769|gb|EDT51815.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|183573040|gb|EDT93568.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183576856|gb|EDT97384.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|220673878|emb|CAR68383.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225723999|gb|ACO19852.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|225725363|gb|ACO21215.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|301799643|emb|CBW32201.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|332074402|gb|EGI84878.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
 gi|332203756|gb|EGJ17823.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 447

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|225867828|ref|YP_002743776.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701104|emb|CAW97948.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 447

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 165/471 (35%), Positives = 240/471 (50%), Gaps = 42/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++         +   +  +    F++DT  L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAKE------AGLSPKQLADQFIAAFMEDTKALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  I  +I  G+AYE+  ++ F  +   NY   + + I + + G       E
Sbjct: 114 VMDYMDEIIVFIAALIKKGYAYESAGDVYFRVAKAANYAKLANKTIADLEAGASGRTDTE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W SPW  GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKAGEIAWASPWSSGRPGWHIECSVMATELLGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T+++LL+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KSFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
                +R  +   HYR+PI+FT + + +A + L     T          ++       A 
Sbjct: 287 -DGQTLRFFLATQHYRKPINFTEKAIHDAGVNLKYLKNTLQQPTVATADASQLNAFITAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D NT + I  L  +A+       +  +   F     + GI    E L+      
Sbjct: 346 KAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAESLD----TE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IE+L+ ER      + F+ AD IR QL ++G  L D K+        RW +
Sbjct: 402 IEQLIAERQEARANRDFAKADAIRDQLAAQGIKLLDTKD------GVRWIR 446


>gi|148998267|ref|ZP_01825736.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|147755910|gb|EDK62954.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
          Length = 447

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 173/468 (36%), Positives = 242/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++ +       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|332202472|gb|EGJ16541.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 447

 Score =  545 bits (1405), Expect = e-153,   Method: Composition-based stats.
 Identities = 173/468 (36%), Positives = 242/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TVRKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++ +       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|332359942|gb|EGJ37756.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 450

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 169/469 (36%), Positives = 242/469 (51%), Gaps = 36/469 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + IKIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y 
Sbjct: 1   MDRMIKIYDTMTRSLREFMPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V Y+ N TD+DDKII RA++E            +  K    F +D + L     T
Sbjct: 61  GFE--VNYISNFTDVDDKIIHRAKEE------GITPKEVADKYIAAFREDVSALGVKPAT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PR  + +  +I  ++ ++  G+AYE+  ++ F      NY   + + + + ++G    
Sbjct: 113 QHPRVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEMSHNYAKLANKTLADLELGASGR 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T   
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT--- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA----- 350
                   V+R      HYR+PI+FT + + +A   L     T      G  D A     
Sbjct: 289 ----IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLKAF 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKN 404
                +A+  D N  + I  + +LA+          +   F     + GI   +E L  +
Sbjct: 345 LDKFTTAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEEVLEAD 404

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               IE+L++ER      + F++AD IR +L  +G  L D K+     R
Sbjct: 405 ----IERLIEERQEARANRDFATADRIRDELADQGIKLLDTKDGVRWTR 449


>gi|148988955|ref|ZP_01820355.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925452|gb|EDK76529.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 447

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 173/468 (36%), Positives = 243/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIENGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|295694815|ref|YP_003588053.1| cysteinyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410417|gb|ADG04909.1| cysteinyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 476

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 178/496 (35%), Positives = 252/496 (50%), Gaps = 60/496 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+++NTL ++   F+  +P  ++MY CGPTVYD+ HIGNAR  +VFD++       Y 
Sbjct: 1   MPIRVFNTLTKRKEVFEPQEPGVVKMYCCGPTVYDYFHIGNARAFVVFDLVR--RYLRYR 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYV+N TD+DDKII RA +EH       A+  +  K  + + +D   L       Q
Sbjct: 59  GYRVTYVQNFTDVDDKIIRRAAEEH------MAVQDLAEKYIRAYFEDAAALGIEPADVQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+ ++I +IQ ++  G AY    ++ FDTS  P+YG  S +       G RV   
Sbjct: 113 PRVTMHMHEIIDMIQALLDKGFAYRIQEDVYFDTSRDPDYGKLSGQDPAALMAGARVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P E  W+SPWG+GRPGWHIECSAMS  YLG   DIH GG DLIF
Sbjct: 173 ERKRHPLDFALWKGSKPGEVAWDSPWGKGRPGWHIECSAMSRTYLGDTLDIHAGGQDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C       A  W+HNG+L     KMSKS GN +T+ ELL+  +      
Sbjct: 233 PHHENEIAQSECVTG-HPFARYWMHNGYLQWNRVKMSKSLGNVVTVRELLKRVR------ 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
               IRL +L  HYR P++F+++ L +A+  L +   +    G                 
Sbjct: 286 -PHAIRLYLLSAHYRHPLNFSLELLEQADRGLERIESSLRDLGDWLGPDSSLTGAVTEES 344

Query: 347 -------------IDPAVLSALYNDLNTVSAIQALHK---LARESTKNHDLLPI------ 384
                        I      A+ +D NT  A+ AL++   LA  + +  D+         
Sbjct: 345 GHVPGLEVDEVQRIHEKWTEAMDDDFNTAEALGALYEGVGLANRAIREQDVTRAKAWQGW 404

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +  A  +G+    +  ++     IE L+  R    K + +++AD IR QL   G +LED
Sbjct: 405 LSYHARFMGLIADGQKESETEREKIEALIARRAEARKKRDWAAADRIRDQLSEMGIVLED 464

Query: 445 YKNPDNGQRMTRWKQK 460
                      RW+++
Sbjct: 465 T------PYGVRWRRR 474


>gi|168485706|ref|ZP_02710214.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183571202|gb|EDT91730.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 447

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 173/468 (36%), Positives = 245/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLRKFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|332708902|ref|ZP_08428873.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352444|gb|EGJ32013.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 494

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 168/513 (32%), Positives = 242/513 (47%), Gaps = 76/513 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F+ ++   +RMY CG TVYD  H+G+AR  IV+D     L++   
Sbjct: 1   MTLNLYNTLTRRKESFEPLETGKVRMYCCGITVYDLCHLGHARTCIVWDTARHYLQWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV+N TDIDDKI+ RAR+E        ++  ++ +    + +D  RL        
Sbjct: 61  D--VNYVQNFTDIDDKILNRARRE------GTSMEAVSERFIDAYFEDMARLNVQEANAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  L+  +   G+AYEA+ ++ +       YG  S RK+++ + G      
Sbjct: 113 PRATHSLDGIKRLVCELEQKGYAYEADGDVYYSVRRFEEYGKLSGRKLEDLQAGASGRVD 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                   KK+P DF +WK + P EP WESPWG GRPGWHIECSAM    LG+  DIH G
Sbjct: 173 VADSVGPKKKDPFDFAVWKSAKPEEPSWESPWGPGRPGWHIECSAMVRDMLGETIDIHTG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNF TI +LL+   
Sbjct: 233 GSDLVFPHHENEIAQSEAVTG-KSLARYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              R      +RL +LM  YR+PIDFT   +  A        +                 
Sbjct: 289 ---RPVDPMAVRLFVLMAQYRKPIDFTDDAIASATNGWQTLKEGLLFGHNYGIQLGWQDQ 345

Query: 341 ------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------ 382
                         S   I      A+ +DLN    +  L ++A+   +  ++L      
Sbjct: 346 SATPKPSQPLQDDLSNKTIAQQFQEAVDDDLNFAGGLAVLFEVAKGLRREGNILVHQGKT 405

Query: 383 -----------PIFNASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFS 426
                            A +LG+E   E       +      IE L+Q+R    K K F 
Sbjct: 406 ETPASELEQQWRSLVELAEVLGLEAQPEEEAEVSTDGLSDGEIEALIQQRAEARKTKNFE 465

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +D IR  L+++G  L D      G  +T W +
Sbjct: 466 LSDRIRDDLQAQGITLID-----QGGGVTTWHR 493


>gi|322411055|gb|EFY01963.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 447

 Score =  545 bits (1404), Expect = e-153,   Method: Composition-based stats.
 Identities = 166/468 (35%), Positives = 242/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  +  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLREFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A Q         +   ++ +    F++DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKIIKAAAQ------AGVSPKELSDRFIAAFMEDTKALGVKPATQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G AYE   ++ F      +Y   + + I E ++G       E
Sbjct: 114 VMDYMAEIISFVQVLISKGFAYEVAGDVYFRVEKSEHYAQLANKTISELEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TSLKENPLDFALWKSAKTGEVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R  +    YR+PI+FT + + +AE+ L     T                   A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTDKAIRDAEVNLKYLKNTFQQPLTEKADEQELKRFVTAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---LLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D NT + I  +  +A+          +   F     + GI   +E L+ +    
Sbjct: 346 QDAMDDDFNTANGITVVFDMAKWINSGSYTGMVKESFEKILAVFGIIFEEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ +R      + F +AD +R QL ++G  L D K+   G R TR
Sbjct: 402 IEALIAKRQEARTNRDFVTADALRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|237738879|ref|ZP_04569360.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423982|gb|EEO39029.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 473

 Score =  544 bits (1403), Expect = e-153,   Method: Composition-based stats.
 Identities = 178/492 (36%), Positives = 270/492 (54%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ I  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT ++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANAE------NVSIKEIAERYIKAYFEDTAQINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT++I  MI +I++++  G+AYE+N ++ F+       YG  S++ I++ + G R+   
Sbjct: 114 KATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYKEGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKKDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L       + +
Sbjct: 234 PHHENEMAQSKCGCGG-TFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KHF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
              VIRL +L +HYR+P++F+   L + +  L +                       +  
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNA------- 387
            +K  ++   + A+  D NT  A+  + +L +   K  D        + + +        
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALDEENFSKTAIEVLDEVYSYLVM 405

Query: 388 -SAHILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS   IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|326403598|ref|YP_004283680.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325050460|dbj|BAJ80798.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 449

 Score =  544 bits (1403), Expect = e-153,   Method: Composition-based stats.
 Identities = 200/467 (42%), Positives = 267/467 (57%), Gaps = 32/467 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK++NT  R+   F   DP+++++YVCGPTVYD AH+GNAR ++VFD L RLLR+ +  
Sbjct: 3   QIKLHNTKTRRREPFAPADPAHVKLYVCGPTVYDRAHLGNARTVVVFDTLVRLLRHLF-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKI  RA +        + I  IT++ T  F +D   L C  P  +P
Sbjct: 61  PRVTYVRNITDIDDKINARAAE------TGETIGEITARTTSWFHEDMAALYCAPPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI  +I LI+ +I  GHAY A   ++F  ++   YG FS R  +E   G RV    
Sbjct: 115 RATGHIGDIIALIERLIARGHAYAAEGHVLFAVATDAEYGKFSGRSPEELLAGARVDVAT 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P  PGW+SPWGRGRPGWHIECSAM    LG+  DIHGGG DLIFP
Sbjct: 175 YKRDPGDFVLWKPSPPDLPGWDSPWGRGRPGWHIECSAMIHATLGETIDIHGGGADLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    + A +W+H G L + G+KMSKS GNF T+ ++L+         P
Sbjct: 235 HHENEIAQSCCAFPGSEFARVWVHAGMLQVNGQKMSKSLGNFRTVQDVLDEA-------P 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------KGIIDPAVLSALYN 357
              +R  +L THYR  +DF+   L EA+  L ++ +                A + AL +
Sbjct: 288 GEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFYRALEKHADPAPAATPPAAFIEALAD 347

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL-GIEV--CKEHL--NKNISIAIEKL 412
           DLNT  AI  LH LA  + +          +A +L GI      +           I+ L
Sbjct: 348 DLNTPGAIAELHALADAAMQGDAASAAGLRAAGMLIGIFNHTADQWFRGEATDDARIDAL 407

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + ERL   + K F+ AD IR +L + G +LED      G   T W++
Sbjct: 408 IAERLAARRNKDFARADAIRAELAAAGILLED------GPGGTTWRR 448


>gi|146319578|ref|YP_001199290.1| cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146321776|ref|YP_001201487.1| cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253752580|ref|YP_003025721.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754406|ref|YP_003027547.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756340|ref|YP_003029480.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
 gi|145690384|gb|ABP90890.1| Cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145692582|gb|ABP93087.1| Cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251816869|emb|CAZ52516.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818804|emb|CAZ56644.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820652|emb|CAR47412.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292559192|gb|ADE32193.1| Cysteinyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 447

 Score =  544 bits (1403), Expect = e-153,   Method: Composition-based stats.
 Identities = 167/468 (35%), Positives = 248/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY+ N TD+DDKII+ A +             ++ K    F +D T+L     T  PR
Sbjct: 61  -VTYISNFTDVDDKIIKAANE------AGMTTKELSDKFIAAFKEDVTKLGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G+AYEA  ++ F    + NY   + + + + ++G       E
Sbjct: 114 VIDYMDEIIDFVQVLIDKGYAYEAAGDVYFRVEKVENYARLANKTLSDLEVGASGRVEGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GQLKEHPFDFALWKTAKSGEVSWGSPWGAGRPGWHIECSVMATEILGATIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS C    +  AN W+HN  LN+   KMSKS GNF+T +++LE        
Sbjct: 234 FPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE-------Q 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID--------PAV 351
               V+R  +   HYR P+++T + +++AEI L     T T   +  +D         A 
Sbjct: 286 IDGQVLRFFLATQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D N  + I A+   A+       +  +   F     + GI   +E L+      
Sbjct: 346 EAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLAVFGIVFEEEVLDS----E 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ ER      + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IEALIAERQAARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|148260406|ref|YP_001234533.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|187629816|sp|A5FYD2|SYC_ACICJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146402087|gb|ABQ30614.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 449

 Score =  544 bits (1403), Expect = e-153,   Method: Composition-based stats.
 Identities = 200/467 (42%), Positives = 267/467 (57%), Gaps = 32/467 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK++NT  R+   F   DP+++++YVCGPTVYD AH+GNAR ++VFD L RLLR+ +  
Sbjct: 3   QIKLHNTKTRRREPFAPADPAHVKLYVCGPTVYDRAHLGNARTVVVFDTLVRLLRHLF-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRNITDIDDKI  RA +        + I  IT++ T  F +D   L C  P  +P
Sbjct: 61  PRVTYVRNITDIDDKINARAAE------TGETIGEITARTTSWFHEDMAALYCAPPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI  +I LI+ +I  GHAY A   ++F  ++   YG FS R  +E   G RV    
Sbjct: 115 RATGHIGDIIALIERLIARGHAYAAEGHVLFAVATDAEYGKFSGRSPEELLAGARVDVAT 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S P  PGW+SPWGRGRPGWHIECSAM    LG+  DIHGGG DLIFP
Sbjct: 175 YKRDPGDFVLWKPSPPDLPGWDSPWGRGRPGWHIECSAMIHATLGETIDIHGGGADLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    + A +W+H G L ++G+KMSKS GNF T+ ++L          P
Sbjct: 235 HHENEIAQSCCAFPGSEFARVWVHAGMLQVDGQKMSKSLGNFRTVQDVLGEA-------P 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------KGIIDPAVLSALYN 357
              +R  +L THYR  +DF+   L EA+  L ++ +                A + AL +
Sbjct: 288 GEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFYRALEKHADPAPAATPPAAFIEALAD 347

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL-GIEV--CKEHL--NKNISIAIEKL 412
           DLNT  AI  LH LA  + +          +A +L GI      +           I+ L
Sbjct: 348 DLNTPGAIAELHALADAAMQGDAASAAGLRAAGMLIGIFNHTADQWFRGEATDDARIDAL 407

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + ERL   + K F+ AD IR +L + G +LED      G   T W++
Sbjct: 408 IAERLAARRNKDFARADAIRAELAAAGILLED------GPGGTTWRR 448


>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|109894895|sp|Q47HK6|SYC_DECAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 456

 Score =  544 bits (1403), Expect = e-152,   Method: Composition-based stats.
 Identities = 184/476 (38%), Positives = 266/476 (55%), Gaps = 43/476 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L+R+   F  I+P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR L+    + 
Sbjct: 2   LKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA      I   + I  +T++      +D   L    P ++PR
Sbjct: 61  -VTYVRNITDIDDKIIKRA------IENGETIQQLTNRFIAFMHEDADALGVQRPDYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++P+M+ LI  +  +G AY+A + ++ +     P YG  S + +D+ + G RV    
Sbjct: 114 ATEYVPEMLDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGERVEVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL FP
Sbjct: 174 AKQDPLDFVLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+HNGF+ ++  KMSKS GNF TI  +LE        + 
Sbjct: 234 HHENEIAQSEGANCCN-FVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLE-------QFD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----QTSTSKGIIDP------AVLS 353
           A V+R  +L  HYR P++++   L +A   L            +   ID          +
Sbjct: 286 AEVVRFFILRAHYRSPLNYSDAHLDDARRSLDSLYFALRDVPPAAADIDWSNEFAGRFAA 345

Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHL--------NK 403
           AL  D ++  AI  L +LA E    K+  L  +      ++G+   +             
Sbjct: 346 ALNEDFDSHGAIAVLFELAAEVNRQKSAGLSCLLKGLGGVIGLLEREPSAYLQGGAGVGG 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               A+ +++ +R    K K F+ AD IR +L++ G IL+D        + T W++
Sbjct: 406 LDEAAVGQMIVDRAAAKKAKNFAEADRIRDELKAAGIILDDS------PQGTTWRR 455


>gi|227888795|ref|ZP_04006600.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227850632|gb|EEJ60718.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 472

 Score =  544 bits (1403), Expect = e-152,   Method: Composition-based stats.
 Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL RK  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +EH        +  +  +  + F++DT  L     T  PR
Sbjct: 62  -VNYVSNFTDVDDKMINEAHKEHT------TVEKLAERYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 175 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS       K  N W+HNGF+ +     KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQSEAKTG-RKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +     V+R  M    YR PI+++   L +AE +L ++  T  +              
Sbjct: 289 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETLED 346

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
                         + A+ +D N  +A+  ++ LA     +                +  
Sbjct: 347 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKLLI 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+   +E         IEKL+ +R    K K ++ +D +R +L++KG ++ED  
Sbjct: 407 AWLEIFGVSFNEEQAEN--DDEIEKLIAQRDEARKNKDWAESDRLRAELQAKGIVIEDT- 463

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW +
Sbjct: 464 -----PQGTRWHR 471


>gi|15902563|ref|NP_358113.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517189|ref|YP_816017.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|30316153|sp|Q8DQS8|SYC_STRR6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15458093|gb|AAK99323.1| Cysteinyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116077765|gb|ABJ55485.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 447

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIERGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|304438773|ref|ZP_07398701.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372775|gb|EFM26353.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 461

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 174/485 (35%), Positives = 250/485 (51%), Gaps = 55/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R + EF  +    + MY CGPTVY+F H+GNARP+++FD L R   + Y   
Sbjct: 1   MKLYNTLSRSLEEFVPVKEGQVNMYNCGPTVYNFIHVGNARPLVIFDTLRRY--FIYKGY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDKII RA +EH         + I+ +  ++F KD   L      T  P
Sbjct: 59  DVNFVVNFTDIDDKIINRANEEHV------DFTEISERYIKEFKKDANGLHLYDYETINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT  I +MI  I+ +     AY  + ++ FD +   +YG  S++ IDE   G R+    
Sbjct: 113 RATEMIKEMIEFIKILESKDAAYVLDGDVYFDINKAKDYGKLSKKNIDELMAGARIGVAE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK+    EP WESPW  GRPGWHIECS M+   LG   DIH GG DL FP
Sbjct: 173 GKRNPGDFVLWKKKKEGEPSWESPWSEGRPGWHIECSVMAKTILGDTIDIHSGGEDLQFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+  +  AN W+HNG +N++  KMSKS GNF TI E+        + + 
Sbjct: 233 HHENEIAQSETANG-KTFANYWLHNGMINVDNEKMSKSKGNFFTIREV-------SKEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPA---- 350
             V+R  +L  HYR PI+F+ + + + +  L +             + + G +D      
Sbjct: 285 LEVLRYFLLTCHYRSPINFSHEVMDQCKASLERMYNAKEKLEKLIENANAGSLDEEVKEL 344

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
                     A+ +D+NT  A+ A+  + +      D         +    N  + +LGI
Sbjct: 345 VDAEVKYFEDAMEDDINTADALTAIFNIVKIINTKVDDSSKETLEYVRDSLNKLSKVLGI 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E   + +S   E L  ERL   K K ++ +D +R +L + G  ++D +        
Sbjct: 405 L---ERKEEGLSPEEEALFYERLEARKNKDYAKSDELRDKLLAMGIEVKDSR------EG 455

Query: 455 TRWKQ 459
           T WK+
Sbjct: 456 TTWKR 460


>gi|254429556|ref|ZP_05043263.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195725|gb|EDX90684.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 460

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 208/482 (43%), Positives = 276/482 (57%), Gaps = 47/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL  K  +F  +DP  I +YVCGPTVY+F HIGNARP++VFDVLYRLL+  Y 
Sbjct: 1   MTLRLQNTLTGKKDDFIPLDPDRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRLY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RNITDIDDKII+ A +        + IS++T + T  F +D   L    P   
Sbjct: 60  -PNVVYARNITDIDDKIIKAAAEN------GEDISVLTERFTAAFAEDMASLNAKTPNII 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT+HIP+MI +I  ++  GHAYEA+ +++F   S+P+YG  S RK+++   G RV   
Sbjct: 113 PKATDHIPEMIQMIATLVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDMLAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DFILWK S+  +PGWESPWGRGRPGWHIECSAM   +LG V DIHGGG DLIF
Sbjct: 173 DYKRHPGDFILWKPSSDEQPGWESPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ CCA   +     W+HNG++N++G KMSKS GNF  + +LL         +
Sbjct: 233 PHHENEIAQGCCAHGTD-YVRYWLHNGYINIDGEKMSKSLGNFRLVRDLLT-------QY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----------DPAV 351
              ++R A+L +HYR P++F+   L  AE  L         +G             +  V
Sbjct: 285 HGEILRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLGRGETVAPEADYQLPDNHPV 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHLNK 403
           L AL +DLNT  A+ ALH +A E  K            L        +L ++      NK
Sbjct: 345 LDALKDDLNTSEAVSALHAIAGELNKAELADKPTLKAELLAAADLLGLLTVDPTAWFQNK 404

Query: 404 NISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           N+S        I+ LV ER    K K F+ AD IR+QL   G  LED +        TRW
Sbjct: 405 NVSEDGLSNDDIDALVAERTQAKKDKNFARADEIRQQLTDAGIQLEDTR------EGTRW 458

Query: 458 KQ 459
            +
Sbjct: 459 SR 460


>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
 gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
 gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
          Length = 460

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 180/479 (37%), Positives = 252/479 (52%), Gaps = 47/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +      +  S I MYVCG TVYD  H+G+AR  + FD++ R LR+   + 
Sbjct: 2   IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RAR         +    +T +   +   D  +L  L P  +PR
Sbjct: 61  -VTFVRNITDIDDKIIQRARD------TGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIPQ+I +I+ ++    AY A N +++F T+S   YG  S + I   + GTR+    
Sbjct: 114 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG  FDIHGGG DLIFP
Sbjct: 174 YKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A+      N W+H G + +   KMSKS  NF T+ ++L         + 
Sbjct: 234 HHENEIAQSTSANDG-PYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNR-------FD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSAL 355
           A  +R  +L  HYR+P++++ + +  A   L++            S            A+
Sbjct: 286 AQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDAWRARFCEAM 345

Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNIS 406
            +D NT  A+  L +L RE  +           L        ++LG +E   +   KN S
Sbjct: 346 DDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKNRS 405

Query: 407 I-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                    IEKL+ +R    +M K+  AD +R +L  +G  LED          T W+
Sbjct: 406 DLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLEDV------GENTSWR 458


>gi|188584813|ref|YP_001916358.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349500|gb|ACB83770.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 469

 Score =  544 bits (1402), Expect = e-152,   Method: Composition-based stats.
 Identities = 176/493 (35%), Positives = 262/493 (53%), Gaps = 59/493 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK  IK++NT+++K  EF       + MYVCGPTVYD+ H+GNAR  ++FDV+ R L Y 
Sbjct: 1   MKMSIKLFNTMKKKKEEFVPKQEGKVDMYVCGPTVYDYFHVGNARAFLIFDVVRRYLDYK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  VTYV+NITDI+DK+I RA ++         ++ +  K T ++  D   +      
Sbjct: 61  GYQ--VTYVQNITDIEDKMINRANED------GITVAELAEKYTSEYFDDARAIGIKDAD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H P+AT HI ++I +IQ+++  G+AY    ++ FDT++  +YG   R+  +E   G RV 
Sbjct: 113 HHPKATEHIAEIIEIIQDLLDKGYAYRQGGDVYFDTAAFDDYGKLCRQDPEELVSGARVA 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNPADF+LWK     EP W+SP+G+GRPGWHIECSAMS  YL    DIH GG DL
Sbjct: 173 VDDRKKNPADFVLWKSKKEGEPAWDSPFGQGRPGWHIECSAMSMKYLDTPLDIHAGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE+AQS  A   +     W+H G+L ++ RKMSKS GNF+T+ +         +
Sbjct: 233 VFPHHENEVAQSEAATGQD-FCKYWMHVGYLEIDNRKMSKSMGNFLTVRDFR-------Q 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDP- 349
            +   V+RL ++  HYR P++FT + + +A+  L +            + S  + + D  
Sbjct: 285 KYDPRVLRLFLMSAHYRSPLNFTDELIEQAKSSLDRLDNFYNNLKFYLEKSREQELTDKE 344

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFN 386
                          +A+ +D NT SA+  +  LA+E                +   +  
Sbjct: 345 QDIMEYLKQARTEFEAAMDDDFNTASALAVIFSLAKEINSYIGNGGENALVFKNTYDLLL 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               ++G+       ++ +   IE+ +QER    K K F  AD IR +L  +G ILED  
Sbjct: 405 EFDQVMGLLP---ETDEILPEEIEQKIQEREQARKQKDFQRADAIRDELRDRGIILEDT- 460

Query: 447 NPDNGQRMTRWKQ 459
                    RWK+
Sbjct: 461 -----PEGVRWKR 468


>gi|167648484|ref|YP_001686147.1| cysteinyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082061|sp|B0T101|SYC_CAUSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|167350914|gb|ABZ73649.1| cysteinyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 462

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 189/480 (39%), Positives = 273/480 (56%), Gaps = 41/480 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+Y+T+ R+  +F   DP  + MYVCGPTVY+ AHIGN RP++VFDVL+RLLR+ YG
Sbjct: 1   MTLKLYDTMAREKRDFVPADPGRVTMYVCGPTVYNHAHIGNFRPVVVFDVLFRLLRHVYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y RN+TD+DDKI  +A  E   I       +IT +    + +D   L  L P+ +
Sbjct: 61  EDAVVYARNVTDVDDKINAKATAEGVEI------KVITDRYLAAYHEDAAALLTLPPSLE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT H+  +I +I  ++ +G AY A   ++FDT + P+YG  S R +D+   G RV   
Sbjct: 115 PKATEHMGPIIEMIGELVANGSAYAAEGHVLFDTQAFPDYGQLSGRDLDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++PADF+LWK S   EP W+SPWG GRPGWHIECSAM    LG+  DIHGGG+DL F
Sbjct: 175 PYKRHPADFVLWKPSKENEPEWDSPWGAGRPGWHIECSAMIDKTLGQTIDIHGGGIDLAF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      AN W+HNGFL++ G KMSKS GN I  +ELL+T        
Sbjct: 235 PHHENELAQSRCAHGAPVLANYWLHNGFLDMAGEKMSKSLGNVIIPHELLKTT------- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------AVLSAL 355
           P   IR A+L  HYR+P+D+T + + +++  L +          ++         V++AL
Sbjct: 288 PGEAIRWALLSGHYRQPLDWTPELIEQSKKALDRLYGALRRAKTVEAGESEPSDEVMAAL 347

Query: 356 YNDLNTVSAIQALHKLA----RESTKNHDLL-----PIFNASAHILGIEV------CKEH 400
            +DLNT  A+    +L+    R  T   +L          ASA +LG          +  
Sbjct: 348 SDDLNTPLAVSGFFELSSAIERAVTAGDELAITANKGRLLASAGLLGFLQADPDSWFEGD 407

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + ++   +E L+  R+     K +++AD IR ++++ G ++ D      G     W+ K
Sbjct: 408 ADDDLKAKVEDLLARRIAARTAKDWTAADAIRAEIDALGVVVMD------GPAGATWRMK 461


>gi|260584970|ref|ZP_05852714.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157400|gb|EEW92472.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 470

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 160/490 (32%), Positives = 246/490 (50%), Gaps = 57/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+  EF+ ++P  ++MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IQVYNTLTRQKEEFKPLEPGIVKMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+ A +             ++ K  + F +DT  L     T  P 
Sbjct: 61  -VNYVSNFTDVDDKIIKAANE------TGMTPEEVSKKYIEAFYEDTAALNVKKATLNPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
             N +  +I  ++ ++    AYE+  ++ F T    +YG  S + I + ++G        
Sbjct: 114 VMNTMDDIIAFVEALVEKEAAYESGGDVYFITEKFKDYGKLSDQSIQDLQVGASQRTESA 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K+NP DF LWK + P E  W+SPWG+GRPGWHIECS M++ +LG   DIHGGG DL
Sbjct: 174 DDAKKRNPLDFALWKSAKPGEISWDSPWGKGRPGWHIECSVMATKHLGDTIDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS         A  W+HN F+ +  +G KMSKS GNF+ +++++      
Sbjct: 234 AFPHHENEIAQSESKTG-HPFARYWMHNAFVTMGEDGEKMSKSLGNFVLVHDII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------- 341
            +     ++R  +   HYR P+ F+   L EA   +SK   T                  
Sbjct: 287 -KEIDPQILRFFLASAHYRRPLKFSESSLQEATANVSKIQTTFSNTRYRLEQAVESLEDD 345

Query: 342 ----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASA 389
                S   ++      + +D N  + +  L++  +E     +        L  +   + 
Sbjct: 346 QDVWASFEALEGKFQEEMDDDFNAANGMTVLYQFVKEWNVYLEREIVSRVILEKLLEKAE 405

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +  I   KE   + +   I+ L+ ERL   K K F+ +D IR+ L+++G +LED     
Sbjct: 406 QLFAIFGMKEVQEELVDDDIQALIDERLEARKAKNFARSDEIRELLKAQGIVLEDT---- 461

Query: 450 NGQRMTRWKQ 459
              + TRW++
Sbjct: 462 --AQGTRWRR 469


>gi|240141599|ref|YP_002966079.1| cysteine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240011576|gb|ACS42802.1| cysteine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 462

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 204/476 (42%), Positives = 279/476 (58%), Gaps = 37/476 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA      +     I  +T     QF +D   L  L   
Sbjct: 61  YGAAHVTYARNVTDVDDKINARA------LERGITIRELTDGTLAQFHRDIRDLGVLMAG 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ +++ GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVVAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--- 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W + +     
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V+ AL +DLNT +A+  LH+LA  S               +   +   E +  
Sbjct: 348 DAEVPEGVVEALCDDLNTPAALGELHRLAGTSPSALKAGAGLMGFLAVTQAQREAERVGA 407

Query: 404 N--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                  +E L+ ER      K ++++D +R  L + G  ++D K+       T W
Sbjct: 408 AGIDVARVEALIAERKAARVAKDWAASDRVRDALTALGVSVKDNKDGT-----TTW 458


>gi|225871262|ref|YP_002747209.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700666|emb|CAW95246.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 447

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 164/466 (35%), Positives = 237/466 (50%), Gaps = 36/466 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I    + MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A++         +   +  +    F++DT  L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAKES------GVSPKELADRFIAAFMEDTKALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  I  +I  G+AYE+  +I F  +   NY   + + I + + G       E
Sbjct: 114 VMDYMDEIIAFIAALIKKGYAYESAGDIYFRVAKASNYARLANKTIADLEAGASGRTDTE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W SPW  GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKEDPLDFALWKSAKLGEISWASPWSAGRPGWHIECSVMATELLGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T+++LL+T       
Sbjct: 234 FPHHTNEIAQSEAKT-SKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLLKTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
                +R  +   HYR+PI+FT + + +A + L     T          ++       A 
Sbjct: 287 -DGQTLRFFLATQHYRKPINFTEKAIHDAGVNLKYLKNTLQQPTVATADASQLAAFITAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+ +D NT + I  L  +A+       +  +   F     + GI    E L+      
Sbjct: 346 KAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAESLD----TE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           IE+L+ ER      + F+ AD IR QL ++G  L D K      R 
Sbjct: 402 IEQLIAERQEARANRDFARADAIRDQLAAQGIKLLDTKEGVRWIRG 447


>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 485

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 172/499 (34%), Positives = 247/499 (49%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L RK  EF  + P ++ MYVCG T YD+ HIG+AR  +VFDVL R LRY   + 
Sbjct: 1   MQIYNSLTRKKEEFIPLKPGHVSMYVCGITAYDYCHIGHARSAVVFDVLVRYLRYIGMQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA +E            I       F  D  RL  L    +P+
Sbjct: 60  -VTFVRNFTDVDDKIINRANRE------GTDFESIARSYIDAFYTDMDRLGILRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L +N+I   HAY   + ++ F   S  +YG  S R I++   G R+    
Sbjct: 113 ATEHIKEMIELCENLIAKKHAYSTPSGDVYFRVRSYADYGKLSGRNIEDLMSGARIEPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS  YL   FDIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKGAKPGEPSWPSPWGPGRPGWHIECSAMSERYLPLPFDIHGGGQDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+  A   ++    W+HNGF+ +   KMSKS  NF+TI ++L        ++ 
Sbjct: 233 HHENERAQTEAAT-DKQFVRYWVHNGFVQINSEKMSKSLNNFVTIRDILA-------NYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
             V+R  ++  HYR P+D+T   L E+E  L +   T T+                    
Sbjct: 285 PEVLRFFLITKHYRSPLDYTSDALEESERALKRIYLTKTAAEAHVAGTKWTATPLPAEIV 344

Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                ++     ++ +D+NT +A+  +  L +   +  +                 L +F
Sbjct: 345 VEATALEAKWDDSMADDMNTAAALGHVFVLMKIVNRILEDKTLKKSEQGRDMIRHALKLF 404

Query: 386 NASAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LG+      +   +     +      +  ++  +QER      K F+ +D IR 
Sbjct: 405 ERWGEVLGLFLMPSSDFLTQLKESRVLRRKIDTDLVQTKLQERKEARAAKDFARSDAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L + G  ++D        
Sbjct: 465 ELLALGVTIQDTAQGVQWD 483


>gi|253581402|ref|ZP_04858628.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836766|gb|EES65300.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 473

 Score =  544 bits (1401), Expect = e-152,   Method: Composition-based stats.
 Identities = 187/493 (37%), Positives = 266/493 (53%), Gaps = 63/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL  KI EF+ +    + MYVCGPTVY++ HIGNARP I FD + R   Y   + 
Sbjct: 2   IKIYNTLSGKIDEFKPVKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V YV+N TD+DDK+I RA +E        ++  I  K  + + +DT+++        +P
Sbjct: 61  -VKYVQNFTDVDDKMIRRANEE------GVSLKDIAEKYIKAYFEDTSKVNLKEAGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT HI  MI +IQN+I  G+AYEA  ++ F+     + YG+ S++ +++ K G R+   
Sbjct: 114 KATEHIGDMIEIIQNLIEKGYAYEAEGDVYFNVEKYKDGYGALSKQNVEDLKSGARIEVA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK +   EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 174 DIKKSPVDFALWKAAKEGEPSWDSPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+   E  A  W+HNG++N+ G KMSKS G F+ + ++LE        +
Sbjct: 234 PHHENEIAQSKCSCGGE-FARYWMHNGYININGEKMSKS-GTFMLLRQVLE-------QF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPA-- 350
              VIRL +L  HYR+P+DF+   L +A+  L +               T +G  D A  
Sbjct: 285 EGRVIRLFILGAHYRKPMDFSNYELNQAKSSLERIENALLRAKDALAADTKEGGADCAEL 344

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKNH--DLLP-------------IF 385
                      ++A+ +D NT   + A+ +L +E  K    D L              + 
Sbjct: 345 AEVLKSSSEKFVTAMDDDFNTAQGLGAIFELIKELNKALEGDKLSAKGKETVKETVDYVV 404

Query: 386 NASAHILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N    +LG I      +    S  +E +++ R      K ++ +D IR +L   G  ++D
Sbjct: 405 NIMQEVLGVILKLDNEVGNLTSELVEFILEMRREARADKNWAMSDKIRDRLAEMGIKIKD 464

Query: 445 YKNPDNGQRMTRW 457
            K+       T W
Sbjct: 465 GKD------TTTW 471


>gi|206560514|ref|YP_002231278.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|229558622|sp|B4ED73|SYC_BURCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|198036555|emb|CAR52452.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 465

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D + L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHEDESALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQASDGDVNYSVRKFTNYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W S +G GRPGWHIECSAM    LG  FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   E   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVDADTLALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|15673833|ref|NP_268008.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|24418700|sp|Q9CEJ0|SYC_LACLA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|12724882|gb|AAK05949.1|AE006415_4 cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326407342|gb|ADZ64413.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 448

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 163/473 (34%), Positives = 250/473 (52%), Gaps = 42/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A+        N   +  + +    F +DT  L     +  P+
Sbjct: 60  -VQYISNFTDVDDKIINGAKA------ANMTTTDFSERYIAAFYEDTDALNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI  IQ ++    AY +  ++ F  S   +Y   + + + +   G       E
Sbjct: 113 ATEFIEAMIEFIQELVDKEFAYVSQGDVYFRVSKSKDYAKLANKNLADLLAGASGRTDEE 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++PADF LWK +   E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TKLKESPADFALWKSAKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +   N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQSEAKTGQK-FVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVVN----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
               ++R  +  THYR P++FT   LTEAE  + K                ++       
Sbjct: 287 --PQILRFFLATTHYRRPVNFTDDALTEAENNIKKIENAYRHLDEQAESNLSALTTFRND 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
            ++A+  D N  + +   +       K +   ++   F+    ILGI+   E    ++  
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGPEVKEFFDQVLEILGIKFKFEQ---SLDS 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IE +++ R +  +++ F+ +D IR  L+++G +LED K+        RW ++
Sbjct: 402 EIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKD------GVRWHRE 448


>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 489

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 164/511 (32%), Positives = 254/511 (49%), Gaps = 77/511 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K+ EF  ++P  + +Y CG TVYD +H+G+ R +IVFD   R L +   + 
Sbjct: 1   MKIHNTLTGKVEEFVPVNPPKVLIYTCGVTVYDDSHVGHGRSLIVFDTFRRFLEHLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA++E            I ++    + +D   +       +PR
Sbjct: 60  -VTFVRNFTDVDDKIINRAKEECT------DFMTIANRYIASYYRDMEAIRVKPADVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+ +++ +IQ++I  G+AYE++ ++ F   S  +YG  S+R  +E + G RV     
Sbjct: 113 VTEHMKEIVDVIQSLIEKGYAYESDGDVYFSVRSFKDYGKLSKRSPEEMEAGARVEPSEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL+FPH
Sbjct: 173 KRDPLDFALWKSAKAGEPSWDSPWGKGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HNG + + G+KMSKS GN++T+ E+          +  
Sbjct: 233 HENEIAQAEAVTG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLKEIYT-------KYHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            ++RL +L THYR P+DF+ +++ E +    +                            
Sbjct: 285 DILRLLVLFTHYRSPLDFSWEKMEETQRAYDRLKGAIEDYEVLKELEVIPGKGGAHPLYD 344

Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------------------- 380
               ++ +   +L +D NT  A+  +  L  E  K  +                      
Sbjct: 345 KVKEVEESFFESLSDDFNTPEALSHIFSLVSELGKVKNRTYSEGKIDESELGAYEYASRF 404

Query: 381 LLPIFNASAHILG-----------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
           LL        +L            +E   E      +  ++ L++ R +  + K+F  AD
Sbjct: 405 LLNTLKKIFGLLEDLYPECEVRRVVERELEAGEVLDTKLVDLLIEVRTLARQEKQFRIAD 464

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L+  G  LED          TRWK++
Sbjct: 465 LIRDRLKELGIELEDT------PAGTRWKKR 489


>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 481

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 163/501 (32%), Positives = 239/501 (47%), Gaps = 65/501 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +YNTL RK  +F  + P  ++MYVCG T Y+ +H+GNARP + +DV+ R L +   
Sbjct: 2   RDLYVYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+++N TD+DDKII  A  E            I ++    +      L        
Sbjct: 62  --AVTHIQNFTDVDDKIIHAANGEQVRW------DTIANRYIASYFDVMDALHVRHADIY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P++I +IQ ++  G AY    ++ +      +YG  S R +D+ + G R+   
Sbjct: 114 PRVSEHMPEIIQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK +   EP WESPWG+GRPGWHIECSAMS  YLGK FD HGGG DLIF
Sbjct: 174 TRKHHPMDFALWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS     +      W+HNGF+ +   KMSKS  NF  + ++L         +
Sbjct: 234 PHHENEIAQSEACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLA-------YY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
               +R  ++  HYR P+DFT  RL E    L +   +                      
Sbjct: 287 DPDAVRFFLISNHYRSPLDFTDARLEEMTRSLERLRTSIMNVLELATMPAGGKSAEAAAL 346

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------------DLLPI 384
            T    +     +A+ +D NT  A  AL +LA++                     ++  I
Sbjct: 347 LTEAQQVAEDFETAMCDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDTSVITEVKRI 406

Query: 385 FNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           F     ILGI                 +  +E +++ R    + K++  AD IR +L++ 
Sbjct: 407 FKMMTDILGILESAWNGQTSSADASEYAALVEAVLEIRKECREKKQYELADAIRDKLQAL 466

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G  +ED        +  RWK+
Sbjct: 467 GITIEDS------PQGARWKK 481


>gi|332365783|gb|EGJ43540.1| cysteine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 447

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 246/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   ++MYVCGPTVY++ H+GNAR  I FD + R   Y   E 
Sbjct: 2   IKIYDTMSRDLREFVPIEGGKVKMYVCGPTVYNYIHVGNARSTIAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DD+II RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VNYISNFTDVDDRIINRAKEE------GITPKEVADKYIAAFREDVTALGVKLATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             + +  +I  +Q ++  G+AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +A   L     T      G  D A         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I    +LA+         ++   F     + GI   +E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVAFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE+L++ER +    + F++AD IR +L ++G  L D K+   G R TR
Sbjct: 402 IERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKD---GVRWTR 446


>gi|310779627|ref|YP_003967960.1| cysteinyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309748950|gb|ADO83612.1| cysteinyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 475

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 173/494 (35%), Positives = 261/494 (52%), Gaps = 63/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL+ K+ EF+ +    + MYVCGPTVY++ HIGNARP I FD + R L Y     
Sbjct: 2   LRIFNTLKGKVEEFKPLKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V YV+N TD+DDK+I+RA +E         +  +  K    + +DT ++        +P
Sbjct: 61  -VKYVQNFTDVDDKMIKRANEE------GITLKEVADKYIAAYFEDTAKVNLKEDGMLRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
           +AT HI +MI LI+ +I    AYE   ++ F   +    YG  S++  ++ + G+RV   
Sbjct: 114 KATEHIGEMIKLIKTLIEKDFAYEVQGDVYFSVKNYNEKYGELSKQNTEDLQSGSRVDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   EP W SPWG+GRPGWHIECSAMS+ YLG  FDIHGGG DLIF
Sbjct: 174 DIKRSPLDFALWKAAKEGEPSWGSPWGKGRPGWHIECSAMSNKYLGPTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  A  WIHNG++N++G KMSKS GNF  + E+LE        +
Sbjct: 234 PHHENEIAQSKCATGGD-FARYWIHNGYINVKGEKMSKSLGNFFLLREVLE-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
              V+R  +L +HYR+PIDF+   L +A+  + +   +                      
Sbjct: 286 EGKVVRFFVLSSHYRKPIDFSEDELNQAKAAVERIENSLMRVLEKMDERDSIGDHLAVES 345

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIF- 385
            + +        ++A+  D NT   I ++ +L +E  K  D                 F 
Sbjct: 346 LAKALEESKTKFVAAMDEDFNTSQGIGSIFELIKEMNKFMDGTSLDAEGREVLTAASDFI 405

Query: 386 -NASAHILGIEV-CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             A   +LG+++  ++ +    S  ++ +++ R      + ++ +D IR +L   G  ++
Sbjct: 406 KEAIIEVLGVDIKVEKKVGNMTSELVDFILEIRQNARVERNWALSDKIRDRLGDMGVKIK 465

Query: 444 DYKNPDNGQRMTRW 457
           D K+       T W
Sbjct: 466 DGKDK------TTW 473


>gi|294084247|ref|YP_003551005.1| cysteine--tRNA ligase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663820|gb|ADE38921.1| Cysteine--tRNA ligase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 465

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 204/484 (42%), Positives = 280/484 (57%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL R+  EF  +DP++I +Y CGPTVYD  H+GNARP++VFDVL RLLR  YG
Sbjct: 2   SGLKLYNTLTRQKDEFVPLDPAHIGIYACGPTVYDRIHVGNARPIVVFDVLVRLLRRQYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKII RA +       N +I+ + +   + F  DT  L   AP  +
Sbjct: 62  --TVTYVRNITDVDDKIIARADER------NMSIATLCADTIKSFHADTESLLTKAPDAE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  M+ +I+ +I +G AYEA   ++F    +P YG  SRR +D+   G RV   
Sbjct: 114 PRATKHIDGMVAMIKTLIANGFAYEAEGHVLFHVKQMPTYGGLSRRSMDDMIAGARVEVA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++ +DFILWK S+  +PGW+SPWGRGRPGWHIECSAMS  YLG+VFDIH GGLDLIF
Sbjct: 174 PYKRDASDFILWKPSSQAQPGWDSPWGRGRPGWHIECSAMSKFYLGEVFDIHAGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA   +K AN W+HNGF+ +EG  MSKS G+F+T+ + +   +      
Sbjct: 234 PHHENEIAQSCCAHNTDKMANYWLHNGFVTVEGETMSKSTGHFVTVADAVAKHR------ 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYND 358
              V+R  +L  HYR P+DF+     +A   L +  +     +  +  +D A L  L +D
Sbjct: 288 -GEVVRYILLSAHYRAPLDFSDHAAFDARNSLDRLYRAVGDVAADETKVDAAFLDCLCDD 346

Query: 359 LNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGI----------------------E 395
           LNT +A+  LH+LAR + K      I   +SA ++G+                      E
Sbjct: 347 LNTPAAMARLHELARLANKGDAAAAIALKSSAEVMGLLGQTGDAWGKGEIKDLSSSMTRE 406

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                  +  +  I+  +  R +    + F+ AD IR +L + G  LED          T
Sbjct: 407 PTSSAQLEVDNSDIDAKIAARNVARNRRDFAEADRIRDELAADGIHLEDT------AEGT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 IWRR 464


>gi|21674967|ref|NP_663032.1| cysteinyl-tRNA synthetase [Chlorobium tepidum TLS]
 gi|34222752|sp|Q8KAK2|SYC_CHLTE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21648199|gb|AAM73374.1| cysteinyl-tRNA synthetase [Chlorobium tepidum TLS]
          Length = 487

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 166/498 (33%), Positives = 241/498 (48%), Gaps = 54/498 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY- 61
             + IYN+L R    F+ I P    +YVCGPTVY  AH+G+A+  + FDV+ R LR+   
Sbjct: 2   SSLHIYNSLTRTKEPFKPIHPGLATIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHVGE 61

Query: 62  -GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
                V YV+NITD+    DD      + +  +         +    T+ F +D  RL  
Sbjct: 62  EQGYKVRYVQNITDVGHLTDDADEGEDKIQKQARQERIEPMEVAQYYTRSFYEDMDRLGV 121

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKM 175
             P   P AT HIP+ I L++ +I  GHAYE+N  + FD +S   YG  S R   +  + 
Sbjct: 122 ERPNIAPTATGHIPEQIALVERLIESGHAYESNGNVYFDVNSFEGYGKLSGRTDQEALQS 181

Query: 176 GTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           G RV E+  K+NP+DF LWK++ P     W+SPWG G PGWH+ECSAM+  YLG   DIH
Sbjct: 182 GGRVAERSDKRNPSDFALWKKAEPGHIMKWQSPWGEGYPGWHLECSAMAMKYLGDTIDIH 241

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG++  FPHH+ EIAQS  A   +     W+HN  + ++G KM KS  NF+ + EL   
Sbjct: 242 GGGMENKFPHHDCEIAQSEAATG-KPFVRYWMHNNMVTVDGVKMGKSLKNFVNLKELFG- 299

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGII 347
                  +   VIR  +L +HYR P+DF+   +  ++    K  +T       +  KG +
Sbjct: 300 ------KFDPLVIRFFILQSHYRSPLDFSEAAIRASQSGFEKLQETYKRLVESAEGKGQL 353

Query: 348 DPA-----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS------------AH 390
           D A     +  AL +D NT  AI  L +  +      D   +  AS              
Sbjct: 354 DVATFEQKITDALNDDFNTPVAIAVLFEFIKALNGALDKDGLDAASKSGAQNLFDSYAGK 413

Query: 391 ILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +LGI   ++ L    S          +  L++ R      K F+++D IR  L  +G  +
Sbjct: 414 VLGILKSRDELLAGESGESAQTLNDVMAVLLELRKEARASKDFATSDKIRDLLMERGIEI 473

Query: 443 EDYKNPDNGQRMTRWKQK 460
           +D +          W +K
Sbjct: 474 KDTR------EGATWSKK 485


>gi|262067257|ref|ZP_06026869.1| cysteine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379031|gb|EFE86549.1| cysteine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 473

 Score =  543 bits (1400), Expect = e-152,   Method: Composition-based stats.
 Identities = 178/492 (36%), Positives = 271/492 (55%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ I  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT ++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANAE------NVSIKEIAERYIKAYFEDTAQINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT++I  MI +I++++  G+AYE+N ++ F+       YG  S++ I++ + G R+   
Sbjct: 114 KATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYREGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKRDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRRYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C       A  W+HNG++N+ G KMSKS+G+F+ + ++L       + +
Sbjct: 234 PHHENEMAQSKCGCGG-TFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KYF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
              VIRL +L +HYR+P++F+   L + +  L +                       +  
Sbjct: 286 EGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNA------- 387
            +K  ++   + A+  D NT  A+  + +L +   K  D        + +F+        
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALDEGNFSKTAIEVFDEVYSYLVM 405

Query: 388 -SAHILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS   IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 485

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 170/499 (34%), Positives = 244/499 (48%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NT+ R    F  + P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQLFNTMARAKEPFSPLHPCKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII++A  E          + I  +    F +D  +L  L    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKKAASEGA------TCAGIAERYIAAFYEDMDKLGILRADAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  M  + + +I  GHAY   + ++ F   S  +YG  S R I++ + G RV    
Sbjct: 113 ATEYVAAMADMAERLIETGHAYRTPSGDVYFRVRSFADYGKLSGRDIEDMRAGARVAPGD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP WESP+G GRPGWH+ECS MS   LG  FDIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   E     W+HNGF+ +   KMSKS GNFITI ++        + + 
Sbjct: 233 HHENEIAQSEAATGKE-FCRFWVHNGFVRINTEKMSKSLGNFITIRDI-------YKRYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
             V+R  ++ +HYR P+D++ Q L EAE  + +                          +
Sbjct: 285 PEVLRFFLVASHYRSPLDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTKLPAEIA 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                 +   ++A+ +D NT  A+  +    R + +  +                +L  F
Sbjct: 345 EELARHEQGFIAAMDDDCNTAQALGHVFGAVRLAGRLLEDKTLAKSAETADILRRILADF 404

Query: 386 NASAHILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
              + ILG            ++ C+          ++ LV ER    K K F  +D IR 
Sbjct: 405 ETWSGILGVCGRDSREFLDALKACRAARLGIDPTRVDALVAERQDARKAKDFPRSDAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L + G  + D        
Sbjct: 465 ELATLGVTVMDTPTGPQWD 483


>gi|77745319|gb|ABB02560.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri]
          Length = 470

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 166/492 (33%), Positives = 256/492 (52%), Gaps = 59/492 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL RK  EF+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L +   + 
Sbjct: 2   LTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K    F++DT  +     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAAEQ------GITVPQLAEKYINAFMEDTAAINIEPATLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I ++I  +Q ++  G+AY  + ++ + +    +YG  S + +D+ ++G        
Sbjct: 114 ATENITEIIKFVQGLVEKGYAYPKDGDVYYRSRKFNHYGQLSGQSLDDLEVGASEHVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+ YLGK  DIH GG DL
Sbjct: 174 EVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      +     W+HNGF+ +  +  KMSKS  NFIT++E++      
Sbjct: 234 EFPHHENEIAQSEAETGQK-FVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDP 349
            +     V+R  M  T YR PI ++   LT+A+  L+          + +    +G +  
Sbjct: 287 -KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQIAFDNLTYREQDADEGDVQE 345

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
                       ++A+ +D+N  + I  +++L + +                +       
Sbjct: 346 VTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAHQDNVSLGAIQAIKKELVEL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G++  +   N+     I++L++ER I  K K F+ +D IR  L+ +G ILED    
Sbjct: 406 MSIFGVK-LEASDNQINDEKIKQLIEERNIARKNKDFARSDEIRHNLKKQGIILEDT--- 461

Query: 449 DNGQRMTRWKQK 460
               + TR K++
Sbjct: 462 ---PQGTRHKKE 470


>gi|194396665|ref|YP_002037254.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194356332|gb|ACF54780.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 447

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 174/468 (37%), Positives = 243/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E
Sbjct: 114 VVEFMADIIRFVEDLIERGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|315221317|ref|ZP_07863240.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315189676|gb|EFU23368.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 447

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 168/471 (35%), Positives = 244/471 (51%), Gaps = 42/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   ++MYVCGPTVY++ H+GNAR    FD + R   Y   E 
Sbjct: 2   IKIYDTMTRSLRKFVPLEEGKVKMYVCGPTVYNYIHVGNARSTAAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVQPATQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++  +I  +Q ++  G AYE+  ++ F      NY   + + + + ++G       E
Sbjct: 114 VVDYMTDIIDFVQVLVDKGFAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK   P E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAVKPGEIFWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDDVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIID--------PAV 351
               V+R      +YR+PI+FT + + +AE+ L     T      G +D           
Sbjct: 286 IDGQVLRFFFATQYYRKPINFTEKAVHDAEVNLKYLKNTYEQPFTGTVDLTELQAFLDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D N  + I  + +LA+     H   ++   F     + GI    E L+ +    
Sbjct: 346 TAAMDEDFNAANGITVVFELAKWINSGHYSQEVKTAFAELLQVFGIVFTAEVLDAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           IE L+++R      K F++AD IR +L +KG  L D K+        RW +
Sbjct: 402 IEALIEQRQAARVAKDFATADKIRDELAAKGIKLLDTKD------GVRWIR 446


>gi|329116688|ref|ZP_08245405.1| cysteine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907093|gb|EGE54007.1| cysteine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 447

 Score =  543 bits (1399), Expect = e-152,   Method: Composition-based stats.
 Identities = 166/468 (35%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+++ R + +F  I  + + MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDSMTRSLRDFYPIKENQVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII  A Q             +  K    F++DT +L     +  PR
Sbjct: 61  -VNYISNFTDVDDKIINAAAQ------AKMTPKELADKFIAAFMEDTAQLGIKPASQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ Q+I  +  +I  G AY++  ++ F      NYG  + + +++ ++G       E
Sbjct: 114 VMDYMDQIIDFVAALIEKGFAYQSEGDVYFRVDKSSNYGKLANKTLEDLEIGASGRTDTE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TDLKENPLDFALWKSAKVGEISWESPWGAGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTV------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------AV 351
               V+R  +    YR+PI+FT + + +AE+ L     T +     D           A 
Sbjct: 287 -DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTQSQPLTGDASAEELQSYVTAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D N  + I  +   A+     H    +   F +   + GI   ++ LN +    
Sbjct: 346 TDAMDDDFNAANGITVVFDFAKWINSGHYTEAVKAAFESMLDVFGIIFQEDVLNAD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+ +R      + F+ AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEALIADRQAARASRDFAKADAIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|295676873|ref|YP_003605397.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295436716|gb|ADG15886.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 465

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 174/484 (35%), Positives = 254/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRALGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  N--VTYVRNITDIDDKIIKRA------VENGETIKSLTDRFIAALHEDADALGIERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIEALEKNGYAYQASDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  +   HYR P++++   + +A   L++                      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDSAALDWNEAYA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL----- 401
               +A+ +D NT  A+  L +LA E  +  D  L     A   +LG+   +        
Sbjct: 346 QRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQQA 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                       AIE  +  R+   + K +++AD IR +L   G  LED         +T
Sbjct: 406 AGAAAEGALEPAAIEAKIAARIAAKQAKDYAAADRIRAELLEAGVALEDKPGG-----LT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|289207861|ref|YP_003459927.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288943492|gb|ADC71191.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 474

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 190/482 (39%), Positives = 282/482 (58%), Gaps = 44/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++ ++NTL  +   F+  DP  + +YVCGPTVY+  H+GN RP++VFDVL+R+LR  YG
Sbjct: 7   RELILHNTLGGRDEPFRPQDPERVTLYVCGPTVYNRVHVGNGRPVVVFDVLFRVLRELYG 66

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITD+DDKI + A +        + I+ +T + T+ F +D   L  L PT +
Sbjct: 67  PEHVIYARNITDVDDKINKAAAEN------GEPIAALTERYTRAFHEDIAELGTLPPTLE 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI  MI LI+ +I  GHAY A   ++FD +S P+YG+ S R +++ + G RV   
Sbjct: 121 PRATDHIQPMIELIERLIERGHAYPAEGHVLFDVTSYPDYGALSGRTLEDMQAGARVEVA 180

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK +   EPGW+S WG GRPGWH+EC+AM   +LG + DIHGGG DL+F
Sbjct: 181 RYKRHPGDFVLWKPAAEGEPGWDSLWGYGRPGWHLECTAMIRSHLGAMIDIHGGGHDLVF 240

Query: 243 PHHENEIAQSCCADRIEK----TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           PHHENEIAQ C A+   +     A  W+HNG + ++G KMSKS GNF  +++LL      
Sbjct: 241 PHHENEIAQGCAAEGCTEHGTYYARYWVHNGHVTIDGEKMSKSLGNFQLLHDLL------ 294

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            ++WP  V+R+A+L  HYR P++F+   LT++   L+   +       ++PA        
Sbjct: 295 -QAWPGEVLRMALLSRHYRAPLNFSEDTLTQSRNALNGLYRVLRDHADVEPAPVNAADTP 353

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCK------ 398
           V +AL +DLNT   I ALH+LA       D      L     A A +LG+          
Sbjct: 354 VFTALLDDLNTPGGITALHRLADALAAAGDPAERARLKGELTAGAGLLGLLQQDPTAWFQ 413

Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +  +  ++  +E+ +  R    K + F++AD IR +L ++G  LED          TRW
Sbjct: 414 GDGEDPGLAAWVEERIAARQAARKNRDFATADAIRDELTARGIELEDT------PEGTRW 467

Query: 458 KQ 459
           ++
Sbjct: 468 QR 469


>gi|292670589|ref|ZP_06604015.1| cysteine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292647755|gb|EFF65727.1| cysteine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 475

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 173/494 (35%), Positives = 250/494 (50%), Gaps = 60/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L       
Sbjct: 2   LTVYNTMTRKKEEFHPLRTGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRFLSRKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +E            I+ +    + K    L        PR
Sbjct: 60  RVRYIQNFTDVDDKIINAANRE------GVTWKEISDRYIAAYFKAMDALNVRRADVFPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  + ++I +I+ +I  G AY     ++ +   +  +YG  S R +++ + G RV    
Sbjct: 114 VSETMAEIIRMIETLIERGFAYVTGAGDVYYRVEAFAHYGRLSGRSLEDMEAGARVEVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+VFD HGGG DLIFP
Sbjct: 174 TKEHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEVFDFHGGGNDLIFP 233

Query: 244 HHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  C D  EK A  W+HNGF+ ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQAEPCIDGDEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KEF 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------QTSTSKGIID-PAVLSA 354
           P  VIR  +L THYR P+DF+ +RL EA+  L +         + S+ +G  D  A L+A
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLHEAQAALDRLHNVHDVIVEFSSREGTADTAAELAA 346

Query: 355 LYNDL------------NTVSAIQALHKLARESTKNHD---------------LLPIFNA 387
                            NT  AI  +  LA+E  + H                    F  
Sbjct: 347 QAETFLHDFDAAMDDDFNTALAISQMFGLAKEINRYHQEVERGTSFDAANFKKAADAFYT 406

Query: 388 SAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            A I+GI   +E +  +      ++ ++  R      K ++ AD IR  L++ G ++ED 
Sbjct: 407 MAEIIGIFEQEEMVADDGLADALMDIIIGIRQEARAAKNWAVADKIRDGLKNAGVVIEDT 466

Query: 446 KNPDNGQRMTRWKQ 459
                     RWK+
Sbjct: 467 PT------GVRWKR 474


>gi|89900143|ref|YP_522614.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344880|gb|ABD69083.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 470

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 174/473 (36%), Positives = 245/473 (51%), Gaps = 38/473 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++IYNTL R I     + P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+   
Sbjct: 11  PMSLRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSG 70

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYVRN+TDIDDKII+RA      +   ++I  +T +      +D   L    PTH
Sbjct: 71  L--RVTYVRNVTDIDDKIIKRA------LENGESIRALTERMVDALHQDADALGIERPTH 122

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT  +PQM+ LI  +   G AY+A N ++ +     P YG  S + +DE + G RV 
Sbjct: 123 EPRATEFVPQMLSLIGRLEQKGLAYQAVNGDVNYAVRKFPGYGKLSGKSLDELRAGERVA 182

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K +P DF+LWK + P EP    W+S +G+GRPGWHIECSAM    LG+  DIHGGG
Sbjct: 183 VADGKDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGG 242

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENEIAQS  A   +  A+IW+HNGF+  +  KMSKS GNF TI ++L     
Sbjct: 243 ADLQFPHHENEIAQSEGATG-KPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILAR--- 298

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------I 346
               + A   R  ++  HYR  ++ +   L +A   L +                     
Sbjct: 299 ----YDAETTRFFIIRAHYRSALNHSDAHLDDARNSLKRLYTALDLVAPEPLLEIDWRQP 354

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI-----EVCKE 399
                 +A+  D  T  A+  + +LA E  K  D  L  +  A    LG+     +V  +
Sbjct: 355 FAARFKAAMDEDFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFLQ 414

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 + +I  L+ +R      K F+ AD IR+ L ++G +L+D       +
Sbjct: 415 AGATLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKDSAAGTVWE 467


>gi|294781851|ref|ZP_06747183.1| cysteine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481662|gb|EFG29431.1| cysteine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 473

 Score =  542 bits (1398), Expect = e-152,   Method: Composition-based stats.
 Identities = 179/492 (36%), Positives = 271/492 (55%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL   + EF+ I  + + MYVCGPTVY++ HIGNARP I FD + R L Y   + 
Sbjct: 2   IKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            VTYV+N TD+DDK+I +A  E      N +I  I  +  + + +DT ++        +P
Sbjct: 61  -VTYVQNFTDVDDKMINKANAE------NVSIKEIAERYIKAYFEDTAQINLKEDGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT++I  MI +I++++  G+AYE+N ++ F+       YG  S++ I++ + G R+   
Sbjct: 114 KATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYKEGYGELSKQNIEDLESGARIDVN 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+  DF LWK S P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGGLDLIF
Sbjct: 174 EIKKDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRRYLGDSFDIHGGGLDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG++N+ G KMSKS+G+FI + ++L       + +
Sbjct: 234 PHHENEMAQSKCACGG-TFARYWMHNGYININGEKMSKSSGSFILLRDIL-------KYF 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------PQTS 341
              +IRL +L +HYR+P++F+   L + +  L +                       +  
Sbjct: 286 EGRIIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQELL 345

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNA------- 387
            +K  ++   + A+  D NT  A+  + +L +   K  D        + + +        
Sbjct: 346 ATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALDEGNFSKTAIEVLDEVYSYLVM 405

Query: 388 -SAHILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               +LG+++  E    NIS   IE +++ R    + K ++ +D IR +L   G  ++D 
Sbjct: 406 IIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKDG 465

Query: 446 KNPDNGQRMTRW 457
           K+       T W
Sbjct: 466 KDK------TTW 471


>gi|116333230|ref|YP_794757.1| cysteinyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|122270082|sp|Q03SU6|SYC_LACBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116098577|gb|ABJ63726.1| cysteinyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 470

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 173/492 (35%), Positives = 252/492 (51%), Gaps = 60/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT+ R+   F+ I P  + MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   LKVFNTMTRQKETFEPITPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A +E         +  +  +    F +DT  L     T  PR
Sbjct: 61  -VKYVSNFTDVDDKMINEANKE------GITVPELGDRFIAAFKEDTAALNIEPATVNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT HI ++I  +Q++I   +AY  + ++ +      +YG  +   +D+ + G        
Sbjct: 114 ATEHINEIIEFVQDLIDKDYAYPVDGDVYYRAHKFSHYGELAHLNLDDLEEGASQHTNDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W SPWG GRPGWHIECS MS+HYLG+ FDIHGGG DL
Sbjct: 174 ETARKEDPVDFALWKGAKPGEISWPSPWGAGRPGWHIECSVMSTHYLGETFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           IFPHH+NEIAQS      +   + W+HNGF+ +  +  KMSKS GNF+T++++L+T    
Sbjct: 234 IFPHHQNEIAQSEAKTG-KTFVHYWLHNGFVTIGDDNEKMSKSLGNFVTVHDILKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPA 350
                   +R  M  T YR PI +T Q L  AE  L +          +   ++   DP 
Sbjct: 290 ----DPQTLRFFMSTTQYRRPIQYTQQNLDTAERNLERLQTAYDNMGYRLKDAEAGNDPK 345

Query: 351 V-----------LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
           V           + A+ +D N  + I  +H+LAR      +           +    +  
Sbjct: 346 VEQETRQIVADYIDAMDDDFNVQNGIAKVHELARLGNVYAERPVVFAGTLDFIRQTLSDL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             + GI+             I+ L+ ERL   K + F  +D IR+QL+S+G ILED    
Sbjct: 406 LSVFGIKFAAAATLD--DDRIQALIDERLAARKSRDFLRSDEIREQLKSQGIILEDT--- 460

Query: 449 DNGQRMTRWKQK 460
               + TRW+++
Sbjct: 461 ---PQGTRWRKE 469


>gi|254422183|ref|ZP_05035901.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196189672|gb|EDX84636.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 486

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 167/493 (33%), Positives = 242/493 (49%), Gaps = 60/493 (12%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R+   F+ + P  + MY CG TVYD+ H+G+AR  IV+D + R L +      V
Sbjct: 5   IYNTLSRQKEAFKPLSPEQVTMYCCGVTVYDYCHLGHARSYIVWDTIRRYLSWRGYN--V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N TDIDDKI+ RARQE      N ++  +  + T  + +D  RL  L       AT
Sbjct: 63  RYVQNFTDIDDKILNRARQE------NSSMEAVAKEYTTAYFEDMARLNILEADEYTYAT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VPEK 182
           + I  +  LI  +   G+AY A  ++ +       YG  S RK+D+ + G          
Sbjct: 117 HTIDGIKRLIHQLEQKGYAYSAKGDVYYSVRKFEGYGKLSGRKLDDMEAGRSGRVGTQAD 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WES WG GRPGWHIECSAM    LG   DIH GG DL F
Sbjct: 177 SIKQDPFDFALWKSAKPDEPAWESTWGPGRPGWHIECSAMVRDRLGDTIDIHMGGADLQF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNG +N++G KMSKS GNF TI  LL+ +     + 
Sbjct: 237 PHHENEIAQSEAATG-KPLATYWMHNGMVNVDGTKMSKSLGNFTTIRNLLDAEA----AP 291

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQTSTSKGI 346
               +R+ ++ + YR P+DFT + +  A+   S                 W + +  +  
Sbjct: 292 DPMAVRMFVMQSQYRMPLDFTEEAIVAAKKGWSTLNEGLNFGVRHGEDLGWAKAAADEIA 351

Query: 347 ID-------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
           +D            ++ +D NT  AI  L  LA+E  +  +++                 
Sbjct: 352 VDALDQAAVEQFRISMDDDFNTPGAIAVLFGLAKELQRQSNVIIHEGAADANPAELQQQW 411

Query: 383 PIFNASAHILGIEVCK-EHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                 A +LG+E    E ++  +     IE L+ +R    + K ++ +D IR +L+++G
Sbjct: 412 QTLVTLAGVLGLEAQAIESVDAGVLSEAEIETLIAQRANAKQAKNYAESDRIRDELKAQG 471

Query: 440 FILEDYKNPDNGQ 452
             L D        
Sbjct: 472 ITLIDKPGGVTAW 484


>gi|45358623|ref|NP_988180.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|61216204|sp|Q6LYD1|SYC_METMP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|45047489|emb|CAF30616.1| Cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 476

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 161/480 (33%), Positives = 236/480 (49%), Gaps = 54/480 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R   EF+ ++   ++MYVCGPTVYD  H+G+ R  + FD++ R L +     
Sbjct: 2   LKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA               I+ +  + F+ D   L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRA------YEKEKDPKEISEQFIKVFLDDMATLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I  I+ +I  G AY+  + + F+     NYG  S   +++   G R+     
Sbjct: 114 VTEHISEIIAFIEKLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARIETSEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN  DF LWK + P EP WESP+G GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNQKDFALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI ++        + +  
Sbjct: 234 HENEIAQSSAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDI-------SKEYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            ++R   +  HYR PID+T + +   +  L K      +                     
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFLL 345

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNAS 388
                       +A+ +D NTV A++++ +++    K   L            L  +   
Sbjct: 346 YDILKNSKNNFYNAMNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKII 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     KE  + +    +  L++ R  +   K +  +D IR  L++ G+ +ED  
Sbjct: 406 GEIFGLFENYFKESSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDNP 465


>gi|171778429|ref|ZP_02919587.1| hypothetical protein STRINF_00438 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282830|gb|EDT48254.1| hypothetical protein STRINF_00438 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 448

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 165/470 (35%), Positives = 250/470 (53%), Gaps = 39/470 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKIY+T+ R + +F  I  + + MYVCGPTVY++ HIGNAR ++ FD + R   Y   
Sbjct: 1   MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y+ N TD+DDKII+ A                + K    F++D   L     T  
Sbjct: 61  K--VNYISNFTDVDDKIIKGAAA------AGMDTKAFSDKFIAAFMEDVKELGVEPATKN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---V 179
           PR  +++ ++I  +++++  G AYEAN ++ F  +   NY   + + +++ ++G      
Sbjct: 113 PRVIDYMDEIIAFVKDLVDKGFAYEANGDVYFRVAKSKNYAKLANKTLEDLEVGASGRVD 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K+NP DF LWK + P E  W+SPWG+GRPGWHIECS M++  LG   DIHGGG D
Sbjct: 173 GEGDIKENPLDFALWKAAKPGEVSWKSPWGQGRPGWHIECSVMATSILGDTIDIHGGGAD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNF+T++++L+T     
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLKTV---- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
                 V+R  +    YR+P++FT + + +A + L     T          S        
Sbjct: 288 ---DGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLGEAVDSAELEKFKA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK-NHDL--LPIFNASAHILGIEVCKEHLNKNIS 406
              +A+ +D NT + I  +  +A+     N+D      F     + G+   +E L+ +  
Sbjct: 345 DFEAAMDDDFNTANGITVVFDMAKWINSGNYDQVTKDTFAKILAVFGVVFEEEVLDAD-- 402

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             IE LV++R      + F++AD IR QL ++G  L D K+   G R TR
Sbjct: 403 --IEALVEKRQEARANRDFATADAIRDQLAAQGIKLLDTKD---GVRWTR 447


>gi|125624812|ref|YP_001033295.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|187629844|sp|A2RMS1|SYC_LACLM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|124493620|emb|CAL98607.1| CysS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071611|gb|ADJ61011.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
           NZ9000]
          Length = 448

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 163/473 (34%), Positives = 254/473 (53%), Gaps = 42/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A  E      N +   ++ +    F +DT  L     +  P+
Sbjct: 60  -VEYISNFTDVDDKIIKAAASE------NISTKELSERYIAAFYEDTDLLNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI  IQ ++   +AY +  ++ F  +   +Y   + + + +   G       E
Sbjct: 113 ATEFIEAMIDFIQELLDKDYAYISEGDVYFRVAKSKDYAKLANKNLADLLAGASGRTDEE 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++PADF LWK     E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TNLKESPADFALWKSVKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +   N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQSEAKTGQK-FVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVV------ 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
               ++R  +  THYR P++FT   LTEAE  + K                ++       
Sbjct: 286 -DPQILRFFLTTTHYRRPLNFTDDALTEAENNIKKIENAYRHLDDQAESNLSALTTFRND 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
            ++A+  D N  + +   +       K +   ++   F+    ILGI+     + +++  
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGAEVKAFFDQVLEILGIKF---EIEQSLDS 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IE +++ER +  +++ F+ +D IR  L+++G +LED K+        RW ++
Sbjct: 402 EIEAMIEERQLAREVRDFAKSDEIRDALKAQGIVLEDTKD------GVRWHRE 448


>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|123081502|sp|Q1LTX2|SYC_BAUCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 462

 Score =  542 bits (1397), Expect = e-152,   Method: Composition-based stats.
 Identities = 176/481 (36%), Positives = 258/481 (53%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL  K   F+ I    + +YVCG T YD  HIG+ R  + FDV+ R LRY   E 
Sbjct: 2   LAIFNTLTNKKEIFKPIHIGKVALYVCGVTAYDLCHIGHVRTFVTFDVVIRYLRYCGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDI+DKII +A          ++   +T +   +   D   L  L P  +PR
Sbjct: 61  -VNYIRNITDIEDKIIRKAANN------GESCQQLTDRMIAEMHHDLDLLNILRPDKEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI ++I L + +I   HAY  +N +++F   S  NYG  S + +++ ++G RV    
Sbjct: 114 ATQHIKEIIQLTRQLIDKEHAYIASNGDVMFAIESANNYGILSSQNLNQLQIGQRVKITT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAMS  YLGK FDIHGGG DLIFP
Sbjct: 174 VKRNPMDFVLWKMSKHGEPTWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS C +      N W+H+G + +   KMSKS  NF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCMEN-NPYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLSA 354
           A  +R  ++ +HYR+P++++ + L  A   L        +                 + A
Sbjct: 286 AETVRYFLISSHYRKPLNYSEKSLQLARTALKSLYIALRNTKKEVIPSGGEYFIEQFMMA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIE-------VCKE 399
           + ND NT +A   L +LA E  +           +       A+ILG+        + K+
Sbjct: 346 MNNDFNTPAAHAVLFQLAHEVNRLKTKNIKSAQGMAATLRYLANILGLLEQDPEVFLQKQ 405

Query: 400 HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  +++IA IE+LV++R  + K  ++  AD +R++L + G +LED        + T W+
Sbjct: 406 KIVTDLNIALIEELVKQRNNIRKKHQWVQADKVREKLAAMGIVLEDT------PQGTIWR 459

Query: 459 Q 459
           +
Sbjct: 460 R 460


>gi|209518045|ref|ZP_03266876.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209501549|gb|EEA01574.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 476

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 175/484 (36%), Positives = 256/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFDV+ R LR    
Sbjct: 13  ESLRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDVVQRWLRTLGY 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    P  +
Sbjct: 73  N--VTYVRNITDIDDKIIKRA------VENGETIKSLTDRFIAALHEDADALGIARPDIE 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 125 PRATDFIPQMLGMIETLEKNGYAYQASDGDVNYAVRKFEGYGKLSGKSLEDLRAGERVAA 184

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 185 NDAKQDPLDFVLWKQAKPEEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGGGQ 244

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 245 DLQFPHHENEIAQSEAATG-QTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 298

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  +   HYR P++++   + +A   L++                      
Sbjct: 299 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDTAALDWNEAYA 356

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV--CKEHLNKN 404
               +A+ +D NT  A+  L +LA E  +  D  L     A   +LG+     + +L   
Sbjct: 357 QRFQTAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQHA 416

Query: 405 ISIAIEKLVQ---------ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              A E  ++          R+   + K +++AD IR +L   G  LED         +T
Sbjct: 417 AGAAAEGALEPAAIEAKIAARIAAKQAKDYAAADRIRAELLDAGVALEDKPGG-----LT 471

Query: 456 RWKQ 459
            W++
Sbjct: 472 EWRR 475


>gi|312114423|ref|YP_004012019.1| cysteinyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311219552|gb|ADP70920.1| cysteinyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 449

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 220/467 (47%), Positives = 282/467 (60%), Gaps = 32/467 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+K+YNT  R+   F+ IDP  +RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1   MKLKLYNTRTRRKELFRPIDPKAVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITD+DDKI  RA  E        +I  +T +   QF  D   +  L PT +
Sbjct: 61  AEHVIYARNITDVDDKINARAAAE------GVSIRELTERTAAQFHADAAAIGALPPTIE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +MI L++ ++  GHAY A   ++F+  S  +YG  SRR +D+ + G RV   
Sbjct: 115 PRATEHIAEMIALVERLVERGHAYAAEGHVLFNVPSDDDYGGLSRRSVDDMRAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S   EPGWESPWG GRPGWH+ECSAM+  +LG VFDIHGGG+DL+F
Sbjct: 175 PYKRDPMDFVLWKPSEGAEPGWESPWGFGRPGWHLECSAMAEKHLGTVFDIHGGGIDLLF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA   E  AN W+HNG L +EG+KMSKS GNFITI +LL       + W
Sbjct: 235 PHHENELAQSTCAHDTEVMANYWVHNGHLQVEGQKMSKSLGNFITIRDLL-------KDW 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
           P  VIRL ML THYR+P+D+T + L E++ +L +W    + +   D              
Sbjct: 288 PGDVIRLNMLRTHYRQPMDWTAKGLAESDQMLRRWRTNLSHEASEDDLDSKDFAELEFFR 347

Query: 353 SALYNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
             L +DLNT  AI  +HK+     K   DLL         LG       L       IE 
Sbjct: 348 RDLADDLNTPMAIAEIHKMGPSGRKFALDLLG--------LGEPAEDPRLMAVDETGIEA 399

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  RL   K K ++ AD IR +L + G  L D KNP  G+  T W+
Sbjct: 400 RITARLAARKSKNWAEADRIRDELAAMGVALMDAKNPATGEIETTWE 446


>gi|322390880|ref|ZP_08064388.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142393|gb|EFX37863.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 447

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 173/465 (37%), Positives = 246/465 (52%), Gaps = 33/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMEDIIRFVADLIEKGYAYESQGDVYFRVEKSNNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L       ++
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------KT 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +DPA         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFAGEVDPADLQNFVDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++A+  D+N  + I  + +LA+     H    + +A A +L        + + +   IE 
Sbjct: 346 IAAMDEDINAANGITVVFELAKWINSGHYNQDVKDALAKML-EVFGVVFVEEVLDADIEA 404

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L+ ER      K F+ AD IR +L ++G  L D K    G R TR
Sbjct: 405 LIAERQEARAKKDFARADAIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|325526735|gb|EGD04251.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 465

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 176/484 (36%), Positives = 246/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +       D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHADEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATLFIPQMLGMIEKLEANGYAYQASDGDVNYSVRKFRNYGKLSGKSLDDLRAGERVAS 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGVALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|299782847|gb|ADJ40845.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Lactobacillus fermentum CECT 5716]
          Length = 473

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 160/493 (32%), Positives = 250/493 (50%), Gaps = 60/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+  EF       + MYVCGPTVY++ HIGNAR ++ FD + R L +   + 
Sbjct: 2   LKIYNTLTRQKEEFHPQQAGIVNMYVCGPTVYNYIHIGNARSVVAFDTVRRYLEFSGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A+++         +  +  K  Q +++DT  L     T  PR
Sbjct: 61  -VNYVSNFTDVDDKMIKAAKEQ------GITVPELAYKYIQAYMEDTAALNVEPATTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT +I  +I  I+++I  G+AY++  ++ +      +YG  S + +D+ ++G        
Sbjct: 114 ATENIDGIISFIEDLIEKGYAYQSGGDVYYRARKFAHYGQLSGQSLDDLEVGASEHVSTE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K +P DF LWK + P E  W+SP  G G PGWHIECS MS+ YLG   DIH GG D
Sbjct: 174 EVAKKXDPLDFALWKAAKPGEIKWDSPVGGPGAPGWHIECSVMSTKYLGDTLDIHAGGQD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS       +  N W+HNGF+ +  +  KMSKS GNF+T+++L+     
Sbjct: 234 LEFPHHENEIAQSEAKTG-HRFVNYWMHNGFVTIGRDNEKMSKSLGNFVTVHDLI----- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
             +     V+R  M  T YR PI ++ + L EA+  L     T  +              
Sbjct: 288 --KEVDPQVLRFFMSTTQYRRPIQYSQESLVEAQANLEHLKNTYDNLAYRLKDATSGTDG 345

Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
                        ++A+ +D+N  + I  +++L R + +  +   +              
Sbjct: 346 GVQRQLADFRARFVAAMDDDINVQNGIAVVYELMRFANQYVEQRLVQREPIVAIQLMLKR 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              + G+++      +     I++L+++R      K F+ +D IR QL  +G ILED   
Sbjct: 406 LVAVFGVDLAV-SATEINDEKIKELIEKRNAARAEKDFALSDQIRDQLRDQGIILEDT-- 462

Query: 448 PDNGQRMTRWKQK 460
                + TR++++
Sbjct: 463 ----PQGTRYRKE 471


>gi|116512729|ref|YP_811636.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123125354|sp|Q02WZ9|SYC_LACLS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116108383|gb|ABJ73523.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 448

 Score =  542 bits (1396), Expect = e-152,   Method: Composition-based stats.
 Identities = 163/473 (34%), Positives = 253/473 (53%), Gaps = 42/473 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R++ +FQ I+P  ++MYVCGPTVY++ H+GNAR ++ FD++ + L +   E 
Sbjct: 1   MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A  E      N +   ++ +    F +DT  L     +  P+
Sbjct: 60  -VEYISNFTDVDDKIIKAAVSE------NISTKELSERYIAAFYEDTDLLNVKRASQNPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI  IQ ++   +AY +  ++ F  +   NY   + + + +   G       E
Sbjct: 113 ATEFIEAMIDFIQELLDKDYAYISEGDVYFRVAKSKNYAKLANKNLADLLAGASGRTDEE 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++PADF LWK     E  W++PWG GRPGWHIECS MS+  LG+  DIHGGG DL 
Sbjct: 173 TNLKESPADFALWKSVKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +   N W+HNGF+N++G KMSKS GNF T++ELL+        
Sbjct: 233 FPHHTNEIAQSEAKTGQK-FVNYWMHNGFVNVDGEKMSKSLGNFTTVHELLQVV------ 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
               ++R  +  THYR P++FT   LTEAE  + K                ++       
Sbjct: 286 -DPQILRFFLATTHYRRPLNFTDDALTEAENNIKKIENAYRHLDDQAESNLSALTTFRND 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
            ++A+  D N  + +   +       K +   ++   F+    ILGI+     + +++  
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGAEVKAFFDQVLEILGIKF---EIEQSLDS 401

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IE +++ R +  +++ F+ +D IR  L+++G +LED K+        RW ++
Sbjct: 402 EIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKD------GVRWHRE 448


>gi|282897582|ref|ZP_06305582.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197505|gb|EFA72401.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 488

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 182/506 (35%), Positives = 257/506 (50%), Gaps = 69/506 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R   EFQ ++P  +RMY CG TVYD+ H+G+AR  IV+DV+ R L +   
Sbjct: 1   MTLSIYNTLTRCQEEFQPVEPGQVRMYYCGVTVYDYCHLGHARACIVWDVVRRYLEFIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y++N TDIDDKI+ RAR+E      N  +  +  +  Q + +D  RL        
Sbjct: 61  --RVRYIQNFTDIDDKILNRARKE------NSTMETVAERYIQAYFEDMGRLGVREADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
           PRAT+ +  +  LIQ++ + G+AY A+ ++ +   +   YG  S RK+ + + G      
Sbjct: 113 PRATHTMNGIKKLIQDLEVRGYAYAADGDVYYAVRNFNEYGKLSGRKLADLQAGASERVN 172

Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE   KK+P DF LWK + P EP WESPWG+GRPGWHIECSAM    LG   DIH G
Sbjct: 173 IEDPEYQKKKDPFDFALWKAAKPCEPAWESPWGKGRPGWHIECSAMVRDRLGDTIDIHAG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS      +  AN W+HNG + ++G KMSKS GNF TI +LL+   
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------Q 339
              R      +RL +LM  YR+P+DFT + +  A                         Q
Sbjct: 289 ---RGVDPMALRLFVLMAQYRKPLDFTEEAILAATNGWHTLKEGLLFGYHHGGKLDWDLQ 345

Query: 340 TSTSKGIID----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
           ++     ID        +A+ +D N    +  + ++A+E  K  +++             
Sbjct: 346 STNEITDIDQVEIEKFTTAVDDDFNFPGGLVVIFEIAKELRKEGNIIVHEGKTQTPSAEL 405

Query: 383 ----PIFNASAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                       +LG+    E  K          IE LVQ+R    K K F+ +D IR++
Sbjct: 406 LTKWQTLVTLTRVLGLIAKPEDQKTIDESLSDKVIENLVQKRQEARKAKDFAESDRIREE 465

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L++KG  L D K        TRW+++
Sbjct: 466 LKAKGITLIDSK------EGTRWQRE 485


>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|61216247|sp|Q72BQ5|SYC_DESVH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 485

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 177/499 (35%), Positives = 244/499 (48%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+   F    P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ RN TD+DDKII+RA +E            +  K    F +D  RL  L    +P+
Sbjct: 60  -VTFARNFTDVDDKIIKRANEEGL------TSQQVAEKYIDTFYEDMDRLNVLRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L + +I  G AY   + ++ F   S P YG  S R ID+ + G RV    
Sbjct: 113 ATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS  ++    DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +     W+HNGF+ ++  KMSKS GNF TI ++LE        + 
Sbjct: 233 HHENEIAQTEAAL-DKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILE-------GYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
             V+R  +L  HYR PIDFT   + EAE  L +  +                       +
Sbjct: 285 PEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATPLPADVT 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                +D A   AL +DLNT +A+  +    R   +  +                L  + 
Sbjct: 345 AEFDTLDRAFDEALEDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLV 404

Query: 386 NASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LG+   +                   +  ++ L++ER  +   K F+ AD IR 
Sbjct: 405 AKWMKVLGVFGREPEAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L + G  + D  +     
Sbjct: 465 ELAALGIEVRDTPSGAVWD 483


>gi|258512691|ref|YP_003186125.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479417|gb|ACV59736.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 474

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 179/495 (36%), Positives = 248/495 (50%), Gaps = 65/495 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YN+L  K    Q ++P  +R Y CGPTVY F H+GNAR  +VFD + R L Y   
Sbjct: 1   MGILLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +V+N TDIDD+II+RA++      +  +   +  +N + + +D  +L     T  
Sbjct: 61  E--VRFVQNFTDIDDRIIQRAQE------LGISPRELAEENIRYYFEDAGKLFIRPATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  + ++I  IQ++I  GHAYE N  + FDTSS P YG  S +  ++ + G R+  +
Sbjct: 113 PRVTECVDEIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQ 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK + P E  W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIF
Sbjct: 173 DEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG LN+ G KMSKS GNFI   +LLE +       
Sbjct: 233 PHHENEIAQSEAHSG-KTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERR------- 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
               +R  +L  HYR P+++T + L +AE  LS+  +                       
Sbjct: 285 DPRAVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMRGALDRAD 344

Query: 346 ------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LL 382
                        I  A + A+ +D NT   + A+    R      +             
Sbjct: 345 EVPSTRGRSDVEQIRSAFIQAMDDDFNTADGMAAIFDGVRVVNTRLEEGGVTLGDLRLYR 404

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            +F     +LGI    +   + +   IE+L+ ER    K + F+ AD IR QL  +G +L
Sbjct: 405 DLFVELLGVLGI---PKKEEERLEDEIERLIAERAEARKRRDFARADEIRDQLRHRGIVL 461

Query: 443 EDYKNPDNGQRMTRW 457
           ED          TRW
Sbjct: 462 EDT------PYGTRW 470


>gi|149002271|ref|ZP_01827213.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237650136|ref|ZP_04524388.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821667|ref|ZP_04597512.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147759586|gb|EDK66577.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 447

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 172/468 (36%), Positives = 242/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   + 
Sbjct: 2   IKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RAR+E            +  K    F +D   L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAREE------GVTPQEVADKYIAAFREDVAALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  ++++I    AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMADIIRFVEDLIEKDFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT------- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +D           
Sbjct: 286 LDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           ++A+  D N  + I  + ++A+       +  +         I GI   +E L+      
Sbjct: 346 VAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           IE L+Q+R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 402 IEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKD---GVRWTR 446


>gi|329113816|ref|ZP_08242587.1| Cysteinyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326696826|gb|EGE48496.1| Cysteinyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 478

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 201/465 (43%), Positives = 275/465 (59%), Gaps = 31/465 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++++  R    F  IDP+++++Y CGPTVYD AHIGN R M+  DVL RLLR+ Y   
Sbjct: 34  LSLHDSQSRATVPFTPIDPAHVKVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHVY--P 91

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITD+DDKI  RAR         + I  +T + T++F +D   +  L P  +PR
Sbjct: 92  RVTFVRNITDVDDKITARARAN------GEDIGSLTQRTTEEFHQDLASMNVLPPDIEPR 145

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I +M  +I  +I +GHAYEA   ++F   S P+YG+ S R  ++ + G RV    +
Sbjct: 146 ATHNIGEMQAMIARLIKNGHAYEAEGHVLFSVGSFPSYGALSGRNPEDLEAGARVEVAPY 205

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS  YLG  FDIHGGG DL+FPH
Sbjct: 206 KKAPGDFVLWKPSDADQPGWDSPWGRGRPGWHIECSAMSHRYLGDSFDIHGGGSDLLFPH 265

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS C     K AN W+HN  L +EG KMSKS GNF+TI ++L          PA
Sbjct: 266 HENERAQSMCCFPHGKFANYWVHNAMLLVEGEKMSKSLGNFLTIRDVLA-------QAPA 318

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIIDPAVLSALYNDLN 360
             +RL +L  HYR  +++T   L EA   L ++ +   +    K  +   VL AL +DLN
Sbjct: 319 EALRLLLLGAHYRSTLNYTQAGLQEARKTLDRFYRALAAGPVPKTDVPEGVLQALADDLN 378

Query: 361 TVSAIQALHKLARESTK-NHDLLPIFNASAHILGI-----EVCKEHLNKNISIAIEKLVQ 414
           T  AI  LH LA ++   +        A A +LG+     E   +    +   AIE L+ 
Sbjct: 379 TPKAIAELHALAAQALAGDRQAAGALKAGAGMLGLLQGDPEQWFKGDASDEDAAIEALIN 438

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ERL   K + F+ AD +R QL+++G +LED K+       T W++
Sbjct: 439 ERLAARKARDFAKADALRDQLQAQGIVLEDTKD------GTSWRR 477


>gi|170079458|ref|YP_001736096.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|229558794|sp|B1XND1|SYC_SYNP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169887127|gb|ACB00841.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 472

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 172/493 (34%), Positives = 243/493 (49%), Gaps = 56/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F+ ++ + +RMY CG TVYD+ H+G+AR  +++DV+ R L++   
Sbjct: 1   MSLSLYNTLHRRSEPFEPLEANLVRMYCCGITVYDYCHLGHARTCLIWDVVRRYLQWSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y++N TDIDDKI+ RAR E        ++  I  K  + + +D   L        
Sbjct: 61  E--VHYIQNFTDIDDKILNRARAEK------SSMGAIAEKFIEAYFEDMEALHIQPADEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  LI ++   G AY +  ++ +       YG  S RK+D+ + G      
Sbjct: 113 PRATHSLDGIQKLIHDLEQRGFAYASQGDVYYAVRKFDGYGKLSGRKLDDMQAGASGRVN 172

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P+   K +P DF LWK +   EP W+SPWG GRPGWHIECSAM    LG+  DIH GG
Sbjct: 173 EDPDAPKKHDPFDFALWKAAKAGEPAWDSPWGAGRPGWHIECSAMVRDRLGETIDIHVGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENEIAQS  A   +  A  W+HNG + +EG KMSKS GNFITI ELL     
Sbjct: 233 SDLIFPHHENEIAQSEAATG-QPLAKYWLHNGMVKVEGEKMSKSLGNFITIRELL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------TSKG 345
             + +    +RL +L  HY +P+DFT + LT A                       T+  
Sbjct: 287 --KKYDPMAVRLFILQAHYTKPLDFTDEALTAATKGWETLNDALLFGAEHLDTNNITADK 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------IFNAS 388
            I     + + NDLN    +  L +LA+E  K  ++L                       
Sbjct: 345 GILAKFKAIVDNDLNFSGGLAILFELAKELKKEKNILVHEGKLQQNPQILASLWLTLKEL 404

Query: 389 AHILGIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           A ILG     K+         IE L+Q+R      K ++  D +R  L  KG +L D   
Sbjct: 405 ADILGFVPETKQQAAGLTDAEIEDLIQQRKDARANKNYAEGDRLRDLLAEKGIVLVDKPG 464

Query: 448 PDNGQRMTRWKQK 460
                 +T W ++
Sbjct: 465 G-----ITEWHRE 472


>gi|218290036|ref|ZP_03494203.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239870|gb|EED07058.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 474

 Score =  541 bits (1395), Expect = e-152,   Method: Composition-based stats.
 Identities = 180/495 (36%), Positives = 248/495 (50%), Gaps = 65/495 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YN+L  K    Q ++P  +R Y CGPTVY F H+GNAR  +VFD + R L Y   
Sbjct: 1   MGIVLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +V+N TDIDD+II+RA++      +  +   +  +N + + +D  +L     T  
Sbjct: 61  E--VLFVQNFTDIDDRIIQRAQE------LGISPRELAEENIRYYFEDAGKLFIRPATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  +  +I  IQ++I  GHAYE N  + FDTSS P YG  S +  ++ + G R+  +
Sbjct: 113 PRVTECVDDIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQ 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK + P E  W SPWG GRPGWHIECS M+  YLG+  DIH GG DLIF
Sbjct: 173 DEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG LN+ G KMSKS GNFI   +LLE +       
Sbjct: 233 PHHENEIAQSEAHSG-KTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERR------- 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------------ 338
               +R  +L  HYR P+++T + L +AE  LS+                          
Sbjct: 285 DPRAVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMRGALDRAD 344

Query: 339 -----QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LL 382
                Q  +    I  A + A+ +D NT   + A+    R      +             
Sbjct: 345 EVPSTQGRSDVEQIRSAFIQAMDDDFNTADGMAAIFDGVRLVNTRLEEGGVTLGDLHLYR 404

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            +F     +LGI    +   + +   IE+L+ ER    K + F+ AD IR QL  +G +L
Sbjct: 405 DLFVELLGVLGI---PKKEEERLEDEIERLIAERAEARKRRDFARADEIRDQLRHRGIVL 461

Query: 443 EDYKNPDNGQRMTRW 457
           ED          TRW
Sbjct: 462 EDT------PYGTRW 470


>gi|163868002|ref|YP_001609206.1| cysteinyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|187629795|sp|A9IRQ9|SYC_BART1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|161017653|emb|CAK01211.1| Cysteinyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 503

 Score =  541 bits (1394), Expect = e-152,   Method: Composition-based stats.
 Identities = 234/506 (46%), Positives = 312/506 (61%), Gaps = 51/506 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K+++ YNTL RK   F  IDP+ +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MMKELRFYNTLTRKKENFIPIDPTKVRLYVCGPTVYDYAHIGNARPLIVFDILFRLLRHV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   V Y RNITD+DDKI  RA  E+P++P+N+AI  +T +   QF +DT  L CL PT
Sbjct: 61  YGSDHVLYARNITDVDDKINARAACEYPNLPLNEAIRQLTERTYFQFQQDTIALGCLLPT 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGT 177
            QPRAT H+ +M  LI+ ++  GHAY+A N I+F  SSI   P+YG+F+ R +DE + G 
Sbjct: 121 SQPRATEHLEEMRALIERLLEKGHAYKAENHILFSISSIKNPPHYGAFANRSLDEMRAGA 180

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           R+    +K+   DF+LWK S   EPGW+SP G    GRPGWHIECSAMS   L       
Sbjct: 181 RIDVAAYKREEMDFVLWKPSAEGEPGWKSPGGIPVLGRPGWHIECSAMSMAKLLAPYGGG 240

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                    +FDIHGGGLDLIFPHHENEIAQSC A   E+ AN W+HNGFL +EG+KMSK
Sbjct: 241 LTCDDPIANIFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSK 300

Query: 281 SNGNFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI  +LE               ++W     R +ML THYREP+++T QRL ++ 
Sbjct: 301 SFGNFITIRSVLENNFLEFNGALAYEIKQNWAGLSARFSMLQTHYREPLNWTAQRLMQSS 360

Query: 332 ILLSKWPQTSTSK-------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W +    K         I+  ++ AL +DLNT  A      L R+  K  D L +
Sbjct: 361 SELYRWYELLRDKKSMMENNEAIEDTLIDALSDDLNTPKA----FTLLRKFYKAGDALAL 416

Query: 385 FNASAHILGI---EVCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
            N   ++LG+   E  KE             S  IE+ + ERL L+  K++ +AD IR +
Sbjct: 417 ANGM-NLLGLLRQEWIKEIDCPLFIKKTSLDSKFIEQCIAERLRLIHNKEWGAADKIRNE 475

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
           L ++G +L+D K+P +G+R+T W+ K
Sbjct: 476 LAAEGILLKDGKDPQSGKRITVWEIK 501


>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score =  541 bits (1394), Expect = e-152,   Method: Composition-based stats.
 Identities = 174/511 (34%), Positives = 250/511 (48%), Gaps = 76/511 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL  K+ EF  ++P  + +Y CG TVYD +H+G+ R +IVFDV  R L +   
Sbjct: 1   MSLKIYNTLSGKVEEFVPLNPPKVYIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEHLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN TD+DDKII RA++E      N     I ++    +  D   +       +
Sbjct: 61  K--VKFVRNFTDVDDKIINRAKEE------NTDFMTIANRYIASYYIDMESIKVKPADVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+ ++I +I+ ++  G+AYE+  ++ F   + P YG  S+R  +E ++G RV   
Sbjct: 113 PRVTEHLQEIIDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPS 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   EP WESPWG GRPGWH EC AM   +LGK  DIHGGGLDL+F
Sbjct: 173 EKKRDPLDFALWKSAKAGEPAWESPWGLGRPGWHTECVAMVFKHLGKTIDIHGGGLDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HNG + + G+KMSKS GN++T+ E+        R +
Sbjct: 233 PHHENEIAQAEALTG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLREV-------YRRY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
              V+RL +L THYR P+DF+ +++ EA+    +         ++               
Sbjct: 285 HPDVLRLLVLFTHYRSPLDFSWEKMEEAKRAYERIRHAIEDLDMLKNLQVVEENKISQLY 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------------- 382
                 + A    L  D NT SA+  +  L  E  K                        
Sbjct: 345 EKVKEAEEAFFEDLSEDFNTPSALSHIFALVGELGKVKSRAISERRISRQDLSAYEFAVS 404

Query: 383 PIFNASAHILGI-----------EVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSA 428
            I      I G+           EV +  L          I+ LV  R      K F  A
Sbjct: 405 SILRHMRGIFGLFEDIYPEKPVREVVRRELEAGQVLDERLIDILVDVRNQARAEKVFKIA 464

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           DYIR +L+  G +LED          T+W++
Sbjct: 465 DYIRDRLKEVGIVLEDT------PAGTKWRK 489


>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|187629811|sp|A1VDQ5|SYC_DESVV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 485

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 177/499 (35%), Positives = 244/499 (48%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R+   F    P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ RN TD+DDKII+RA +E            +  K    F +D  RL  L    +P+
Sbjct: 60  -VTFARNFTDVDDKIIKRANEEGL------TSQQVAEKYIDTFYEDMDRLNVLRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L + +I  G AY   + ++ F   S P YG  S R ID+ + G RV    
Sbjct: 113 ATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWHIECSAMS  ++    DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +     W+HNGF+ ++  KMSKS GNF TI ++LE        + 
Sbjct: 233 HHENEIAQTEAAL-DKPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILE-------GYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
             V+R  +L  HYR PIDFT   + EAE  L +  +                       +
Sbjct: 285 PEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLARTERGRSKWSATPLPADVT 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                +D A   AL +DLNT +A+  +    R   +  +                L  + 
Sbjct: 345 AEFDTLDRAFDEALEDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLV 404

Query: 386 NASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LG+   +                   +  ++ L++ER  +   K F+ AD IR 
Sbjct: 405 AKWMKVLGVFGREPEAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L + G  + D  +     
Sbjct: 465 ELAALGIEVRDTPSGAVWD 483


>gi|188576215|ref|YP_001913144.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520667|gb|ACD58612.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 474

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 192/494 (38%), Positives = 263/494 (53%), Gaps = 58/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  YG
Sbjct: 1   MSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRRYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P  +
Sbjct: 61  --ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT HIPQ++ +I+ +I +GHAY A   ++F  SS  +YG  SRR  DE   G RV   
Sbjct: 113 PEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVDVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+          
Sbjct: 233 PHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH------- 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
           P   +R A+L  HYR+P+D++   + +A   L +   T      ++              
Sbjct: 286 PPEALRYALLSAHYRQPLDWSDGLIEQATNTLDRLYGTLRDLAALEACGSSGVEVSKTIP 345

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHILGIEV-------- 396
             V SAL +DLNT  A+  +  +A E+    + L          + +  +          
Sbjct: 346 VEVESALQDDLNTPLALSVIASIASEARALRNELVHGGEPSARMSELHAVRAKLLGAGLA 405

Query: 397 -----------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                           + +    I  LVQER    K K F+ AD IRKQL  +G +LED 
Sbjct: 406 LGLLQQDPAAWFSRGTDADDDARITALVQERSAAKKAKDFARADAIRKQLADEGIVLEDT 465

Query: 446 KNPDNGQRMTRWKQ 459
                  +  RWK+
Sbjct: 466 ------PQGVRWKR 473


>gi|295396934|ref|ZP_06807057.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974827|gb|EFG50531.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 473

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 162/493 (32%), Positives = 241/493 (48%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  +  EF+ + P +I MYVCGPTVY++ HIGNAR  + FD + R   Y   + 
Sbjct: 2   LKIYNTLTNQKEEFKPLVPGSISMYVCGPTVYNYIHIGNARSTVAFDTVRRYFEYRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA +E            I  K  + F +DT  L     T  PR
Sbjct: 61  -VKYVSNFTDVDDKIINRANEEGL------TPEQIADKYIEAFYEDTDALNVKRATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
              ++  +I  + +++    AY  + ++ + T     YG  S + ID+ + G        
Sbjct: 114 VVENMDDIIQFVADLVDKDFAYVVDGDVYYRTRKFEKYGQLSDQNIDDLRAGASERLEAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  K++  DF LWK + P E  W SPWG GRPGWHIECS M++  LG   DIH GG DL
Sbjct: 174 SQSKKEDVVDFALWKSAKPGEISWTSPWGEGRPGWHIECSVMATKLLGDTLDIHAGGHDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS         AN W+HNGF+ +  +  KMSKS GNF+  ++L+      
Sbjct: 234 TFPHHENEIAQSEAHTG-HTFANYWMHNGFVTMGDDDEKMSKSLGNFVLAHDLM------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
            +     V+R  +   HYR P+ F  + + +A   L+       +               
Sbjct: 287 -KQVDPQVVRFFLASAHYRSPLRFNEENIQDATNNLNNLKTAYANLNYRFEDAKAQLDND 345

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
                    ++   + A+ +D+NT + +  +++L R+     +   +           F 
Sbjct: 346 AEVLAQIKALENEFIEAMDDDVNTPNGLTVVYRLMRDMNVYTNQKEVSIPVLEAFKESFT 405

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+ +  E   + ++  I+ L+ ER      K F+ AD IR QL+++G IL+D  
Sbjct: 406 ALLTIFGVTLSDEQ--ELLADDIQALIDERNQARADKNFARADEIRDQLKAEGIILDDT- 462

Query: 447 NPDNGQRMTRWKQ 459
                 + TRWK+
Sbjct: 463 -----AQGTRWKR 470


>gi|258543649|ref|YP_003189082.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256634727|dbj|BAI00703.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256637783|dbj|BAI03752.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256640837|dbj|BAI06799.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256643892|dbj|BAI09847.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256646947|dbj|BAI12895.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256650000|dbj|BAI15941.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256652990|dbj|BAI18924.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656044|dbj|BAI21971.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 477

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 200/465 (43%), Positives = 275/465 (59%), Gaps = 31/465 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + ++++  R    F  IDP+++++Y CGPTVYD AHIGN R M+  DVL RLLR+ Y   
Sbjct: 33  LSLHDSQSRATVPFTPIDPAHVKVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHVY--P 90

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITD+DDKI  RAR         + I  +T + T++F +D   +  L P  +PR
Sbjct: 91  RVTFVRNITDVDDKITARARAN------GEDIGSLTQRTTEEFHQDLASMNVLPPDIEPR 144

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I +M  +I  +I +GHAYEA   ++F   S P+YG+ S R  +E + G RV    +
Sbjct: 145 ATHNIGEMQAMIARLIENGHAYEAEGHVLFSVGSFPSYGALSGRNPEELEAGARVEVAPY 204

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK S   +PGWESPWGRGRPGWHIECSAMS  YLG  FDIHGGG DL+FPH
Sbjct: 205 KKAPGDFVLWKPSDADQPGWESPWGRGRPGWHIECSAMSHRYLGDSFDIHGGGSDLLFPH 264

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS C     K AN W+HN  L +EG KMSKS GNF+TI ++L          PA
Sbjct: 265 HENERAQSLCCFPHGKFANYWVHNAMLLVEGEKMSKSLGNFLTIRDVLA-------QAPA 317

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIIDPAVLSALYNDLN 360
             +RL +L  HYR  +++T   L EA   L ++ +   +    +  +   V+ AL +DLN
Sbjct: 318 EALRLLLLGAHYRSTLNYTQAGLQEARKTLDRFYRALAAGPVPETDVPEGVMQALADDLN 377

Query: 361 TVSAIQALHKLARESTK-NHDLLPIFNASAHILGI---EVCKEHLNK--NISIAIEKLVQ 414
           T  AI  LH LA ++   +        A A +LG+   +  +       +   AIE L+ 
Sbjct: 378 TPKAIAELHALAAQALAGDRQAAGALKAGAGMLGLLQGDPEQWFKGDACDEDAAIEALIN 437

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ERL   K + F+ AD +R QL+++G +LED K+       T W++
Sbjct: 438 ERLAARKARDFAKADALRDQLQAQGIVLEDTKD------GTSWRR 476


>gi|295425605|ref|ZP_06818292.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295064621|gb|EFG55542.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 486

 Score =  541 bits (1394), Expect = e-151,   Method: Composition-based stats.
 Identities = 171/498 (34%), Positives = 259/498 (52%), Gaps = 62/498 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +K++NTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR +I FD + R   Y  
Sbjct: 10  EQAVKVFNTLSRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRG 69

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YV N TD+DDK+I  AR E      N  +  +  +    +++DT  L     T 
Sbjct: 70  YK--VKYVSNFTDVDDKMINEARAE------NTTVPKLAERYINAYLEDTEALNVEPATL 121

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
            PRAT+ I ++I  ++ +I  G+AYE + ++ +      +YG  S + I + + G     
Sbjct: 122 HPRATHEIKEIIAFVKELIAKGYAYEVDGDVYYRAKKFADYGKLSDQNIAQLEEGASEHI 181

Query: 180 --PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGG
Sbjct: 182 NDTEQQRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGG 241

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
           G DL FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T+++++  
Sbjct: 242 GQDLEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDII-- 298

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------- 343
                +     V+R  M    YR  I+++   L +A+++L ++  T T+           
Sbjct: 299 -----KEVDPQVLRFFMASVQYRRQINYSEDNLKQAQVILERFKNTLTNINYRLEDDTAS 353

Query: 344 --KGIIDPA-------VLSALYNDLNTVSAIQALHKLARESTKNHDL-------LPIFNA 387
                +  A          A+ +D N  +A+ A+++L      N +L       L  F  
Sbjct: 354 QEDAALKQAVAQTKLKFEQAMDDDFNVQNALTAIYELLPVVNANTNLANVDKTELKQFKK 413

Query: 388 S----AHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 +I GI+  K    K       I+ LV++R    K K ++++D IR+QL+  G  
Sbjct: 414 LLCQWLNIFGIDCDKLVATKASAEDEQIDALVKKRDEARKNKDWATSDQIREQLKKMGIT 473

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           ++D        + TRW +
Sbjct: 474 IQDT------PQGTRWTR 485


>gi|21231689|ref|NP_637606.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768188|ref|YP_242950.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|24418691|sp|Q8P8J0|SYC_XANCP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|81305837|sp|Q4UVJ3|SYC_XANC8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21113388|gb|AAM41530.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66573520|gb|AAY48930.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 457

 Score =  540 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 192/477 (40%), Positives = 265/477 (55%), Gaps = 39/477 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I   HAY A   ++F  +S  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIASAHAYAAEGHVLFAVASFADYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAATHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGAVFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSA 354
             P   +R A+L  HYR+P+D++   + +A+  L +   T        +  +I   V +A
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLHDVAASAVIPAPVEAA 345

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE------------VCKEHLN 402
           L +DLNT  A+  + ++A E+ K +D        A +LG                    +
Sbjct: 346 LDDDLNTPQALAEVARIAGEARKANDAADRARLKAELLGAGLALGLLQQEPAAWFSRGAD 405

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 I  LV ER    K K F+ AD IR+QL  +G +LED        +  RWK+
Sbjct: 406 AGDDARIAALVDERSAAKKAKDFARADAIRQQLADEGIVLEDT------AQGVRWKR 456


>gi|78066853|ref|YP_369622.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
 gi|109894879|sp|Q39EY8|SYC2_BURS3 RecName: Full=Cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|77967598|gb|ABB08978.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 465

 Score =  540 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 176/484 (36%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +       D + L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIGAMHDDESALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATEFIPQMLGMIETLETNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGTSWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEADTLALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLETGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|332523431|ref|ZP_08399683.1| cysteine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314695|gb|EGJ27680.1| cysteine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 447

 Score =  540 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 161/468 (34%), Positives = 244/468 (52%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + I MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLKENQISMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYSGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +         +   +  K  + F+ DT +L     +  PR
Sbjct: 61  -VNYISNFTDVDDKIIKAAAES------GISPKALADKFIEAFMADTKQLGIKPASQNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G AYE+  ++ F  +   NY   + + + + ++G       E
Sbjct: 114 VMDYMGEIIAFVQELIQKGFAYESAGDVYFRVTKSENYARLANKTLADLEVGASGRIDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P E  W+SPW +GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 ATLKEDPLDFALWKSAKPGEIFWDSPWSKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      ++ AN W+HNGF+N++  KMSKS GNF+T++++LE       S
Sbjct: 234 FPHHTNEIAQSEAKTG-QRFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLE-------S 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               V+R  +    YR+PI+FT + + +AE+ L     T          +        + 
Sbjct: 286 VDGQVLRFFLATQQYRKPINFTEKAIRDAEVNLKYLKNTYLLPLKTVSDTNRLFDFKKSF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D N  + I  +   A+     H    +   F     + GI   +E ++      
Sbjct: 346 KEAMDDDFNAANGITVIFDFAKWINSGHYDQTIKTAFGEMLEVFGIVFQEEVIDS----E 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +E L+ +R      + F+ AD IR QL ++G  L D K+   G R TR
Sbjct: 402 VEALIAQRQTARAARDFAKADSIRDQLAAQGIKLLDTKD---GVRWTR 446


>gi|30316152|sp|Q8DHW6|SYC_THEEB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 486

 Score =  540 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 165/503 (32%), Positives = 244/503 (48%), Gaps = 64/503 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R++  F  + P  + +Y CG TVYD+ H+G+AR  + +DVL R L +   
Sbjct: 1   MPLHLYNTLSRRLEPFSPLHPERVTIYACGVTVYDYCHLGHARSYVAWDVLRRYLTFLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N TDIDDKI+ RA          + ++ ++ +    + +D   L  L  +  
Sbjct: 61  --TVHYVQNFTDIDDKILRRA------YENGETMATVSDRYIAAYHQDMAALNILPASAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  IP++I LIQ ++  G+AY A  ++ +  +  P+YG  S R++++   G      
Sbjct: 113 PRATEVIPEIINLIQGLLDRGYAYVAGGDVYYAVAQFPSYGKLSGRQLEQLMAGASGRIE 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
             E+  K++P DF LWK + P E      WE+PWG+GRPGWHIECSAM     G   DIH
Sbjct: 173 EEEEQRKRHPLDFALWKAAKPEEMSVYHPWEAPWGKGRPGWHIECSAMVRQAFGATVDIH 232

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+DLIFPHHENEIAQS      +  A  W+HNGF+ +   KMSKS GNF TI +LL  
Sbjct: 233 CGGMDLIFPHHENEIAQSEAVT-QQPLARFWLHNGFVTVNTEKMSKSLGNFTTIRDLL-- 289

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------ 348
                +      +RL +L   YR+P+DFT + LT A        +       I       
Sbjct: 290 ----AQGLDPMALRLLVLQAQYRKPLDFTPEALTAAAKGWQTLGEALHLHQQIPLPPIDA 345

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
                     A   A+  DLNT +A+  + +LA+   +                      
Sbjct: 346 AEVRSHPKTEAFCQAMDEDLNTAAALAVIFELAKTLNREQHRYLHGGGWGRSPAEVSRDW 405

Query: 383 PIFNASAHILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                 A +LG+E  +E       +     I+ L+  R    + K ++ +D +R  L ++
Sbjct: 406 HTLVTLAQVLGLEAKEESNPALTVELTDEEIQALIAARTAARQAKNYTESDRLRDLLLAQ 465

Query: 439 GFILEDYKNPDNGQRMTRWKQKP 461
           G  L D K+       T W + P
Sbjct: 466 GVKLVDQKDGT-----THWFRVP 483


>gi|331006994|ref|ZP_08330231.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419182|gb|EGG93611.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 478

 Score =  540 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 187/498 (37%), Positives = 263/498 (52%), Gaps = 64/498 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  ID   IR+YVCG TVYD+ HIG+AR +I FDV+ R LR      
Sbjct: 3   LTIYNTLAREKVIFTPIDAGKIRLYVCGMTVYDYCHIGHARVLISFDVIVRFLRSQG--W 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII RA +        ++  I+  +      +D   L  L P  +PR
Sbjct: 61  DVEYVRNITDVDDKIINRAEEN------GESSEILAQRFIDAMHEDERALNILPPNQEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+  +I +++ +I   +AY A NN++ +      NYG  S +K DE   G RV    
Sbjct: 115 ATAHMDNIIAMVKTLINKNYAYVASNNDVYYRVGKFGNYGQLSGKKPDELMAGARVEVGD 174

Query: 184 HKKNPADFILWKRSTPMEP---------GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            K++P DF LWK   P             WESPWG GRPGWHIECSAMS   LG  FDIH
Sbjct: 175 IKEDPRDFALWKAIDPSNVVGDGKNAPVSWESPWGAGRPGWHIECSAMSKSCLGNSFDIH 234

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHENEIAQS  A+  +   N W+H G + ++G KMSKS GNF TI ++L  
Sbjct: 235 GGGPDLPFPHHENEIAQSEAANGCK-YVNYWLHAGAVRVDGEKMSKSLGNFFTIRDVL-- 291

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
                + + + VIR  ++ +HYR  I+++   L EA+  L ++ QT      ++PA    
Sbjct: 292 -----KKYHSEVIRYLIVNSHYRSSINYSEDNLIEAKSGLDRFYQTLKHYTDVEPAAIES 346

Query: 351 ---------VLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHILG 393
                     + ++ +D NT  A+  +++L +        ++ K   L+    A A+ILG
Sbjct: 347 LSDSVYYQHFVDSMNDDFNTRIALSGMYELIKTINTVAVDDAEKAKKLVAELKAMANILG 406

Query: 394 IEVCK--EHLNKNIS---------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +      E L                IE L+ +R+   K K++  AD IR+QL+ +G +L
Sbjct: 407 VLQADPTEFLQAEDKTSQVVGLSIDVIETLISQRIQAKKDKQYQRADDIRQQLDDQGVLL 466

Query: 443 EDYKNPDNGQRMTRWKQK 460
           ED +        T W++K
Sbjct: 467 EDSR------EGTAWRRK 478


>gi|94310030|ref|YP_583240.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353882|gb|ABF07971.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 491

 Score =  540 bits (1393), Expect = e-151,   Method: Composition-based stats.
 Identities = 177/481 (36%), Positives = 254/481 (52%), Gaps = 45/481 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++ IYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD+++R LR    
Sbjct: 31  QQLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGY 90

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+NITDIDDKII RA +        + I  +T++  Q   +D T L  + P ++
Sbjct: 91  D--VTYVQNITDIDDKIIRRAAEN------GETIGQLTTRFIQYMHEDATALGVIRPDYE 142

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I+ +   G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 143 PRATEYVPQMLNIIEKLEAKGLAYQATDGDVNYSVRKFPGYGKLSGKSLEDLRAGERVNA 202

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W+S WG GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 203 NDAKQDPLDFVLWKSAKATEPPESKWDSKWGSGRPGWHIECSAMSCTLLGEHFDIHGGGA 262

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A       N+W+HNGF+ +   KMSKS GNF TI ++L      
Sbjct: 263 DLQFPHHENEIAQSEGASG-RPFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVL------ 315

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
            + + A V+R  +L  HYR P++++   L +A   L++                 +    
Sbjct: 316 -KEYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKETQPGGCAVDWEESHA 374

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEH------ 400
                A+ +D NT  A+  L  LA E  +   +       A    LG+     H      
Sbjct: 375 KRFAEAMNDDFNTPIAMSVLFDLASEVNRTGSVAAAHQLKALGGTLGLLERDPHTFLQGG 434

Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE  +  R      + F+ AD IR +L   G +LED          T W+
Sbjct: 435 HVAGSLSGEQIEAQIAARRAAKAARNFAEADRIRAELLEAGVVLEDKPGGA-----TEWR 489

Query: 459 Q 459
           +
Sbjct: 490 R 490


>gi|116493238|ref|YP_804973.1| cysteinyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122265298|sp|Q03E41|SYC_PEDPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116103388|gb|ABJ68531.1| cysteinyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 470

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 168/492 (34%), Positives = 249/492 (50%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNT+ R    F+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   E 
Sbjct: 2   IKIYNTMSRTKETFKPLVDHKVSMYVCGPTVYNYIHIGNARSIIAFDTIRRYFEYRGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDK+I  AR++         +  +  +    F +D   +     T  PR
Sbjct: 61  -VKFVSNFTDVDDKMINSAREQ------GITVPELADRYIGAFKEDVQAVNVEPATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT +I  +I  I +++  G AY  + ++ +       YG+ S + IDE + G        
Sbjct: 114 ATENIDDIIAFIADLMDKGFAYAVDGDVYYRARKFSKYGALSHQNIDELEQGASQHVDDE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK +   E  W++PWG GRPGWHIECS MS+ YLG  FDIHGGG DL
Sbjct: 174 ETARKEDPIDFALWKAAKGDEIAWKAPWGTGRPGWHIECSVMSTKYLGDTFDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      ++ A  W+HNGF+ +  +  KMSKS GNF+T+++L+      
Sbjct: 234 QFPHHENEIAQSEAKTG-KQFARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLV------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
            +     V+R  M  T YR PI +T   L +A+  L K                      
Sbjct: 287 -QKINPQVLRFLMSTTQYRRPIQYTQASLQDAKNNLEKLQNAFINLNYRLQGAQGAADAT 345

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
            +     ++   ++A+ +D N  + I  +++ AR      +           LL  +   
Sbjct: 346 VAEQAAQLETDFITAMDDDFNAQNGITVVYEFARLINVYSEKTAVNAEQINQLLTSYAKM 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A + GIE+ +    +N    I++LV++R      + F ++D +R QL+  G ILED    
Sbjct: 406 AAVFGIELKQI---ENDDAEIDELVKQRDQARADRDFETSDRLRNQLKEMGVILEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 460 ---PQGTRWRKK 468


>gi|229009599|ref|ZP_04166825.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229053936|ref|ZP_04195370.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
 gi|229131097|ref|ZP_04260009.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|229165078|ref|ZP_04292873.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228618341|gb|EEK75371.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228652310|gb|EEL08235.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228721354|gb|EEL72875.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228751621|gb|EEM01421.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 449

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 164/472 (34%), Positives = 242/472 (51%), Gaps = 57/472 (12%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+
Sbjct: 2   PLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKL 59

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           I+ A +      + + +  I  +  + + +D T L C   T  PR T ++  +I  IQ +
Sbjct: 60  IKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQEL 113

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
           +  G+AYE+  ++ F T     YG  S + I + + G R+     K++P DF LWK +  
Sbjct: 114 VNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKE 173

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +
Sbjct: 174 GEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-K 232

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A  W+HNG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR P
Sbjct: 233 TFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHP 285

Query: 320 IDFTVQRLTEAEILLSKWPQT---------------------STSKGIIDPAVLSALYND 358
           I+F+   L      L +                                  A   A+ +D
Sbjct: 286 INFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMEKFQVAFEEAMDDD 345

Query: 359 LNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISI 407
            NT +AI  L+ +A  + +               +        ILG+E+ +E L   +  
Sbjct: 346 FNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFSILGLELAQEEL---LDE 402

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IE L+Q+R+   + + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 403 EIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDT------AQGTRWKR 448


>gi|90423589|ref|YP_531959.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|109894931|sp|Q216P6|SYC_RHOPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|90105603|gb|ABD87640.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 488

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 217/496 (43%), Positives = 296/496 (59%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL ++  +F  +DPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG  
Sbjct: 3   LRLYDTLTKEKRDFAPLDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYGPD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKI +RA ++ P +P+N+AI  +T +  +QF  D   L CL PT +PR
Sbjct: 63  HVKYVRNITDVDDKINDRATRDFPGLPLNEAIRKVTEQTEKQFHDDVDALGCLRPTIEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKMGT 177
           AT HI +M  +I  ++  G AY A + ++F   ++       P YGS + R +DE   G 
Sbjct: 123 ATEHIGEMRSIIDRLVEGGFAYVAEDHVLFSPQAMNAADGILPRYGSLANRSLDEMIAGA 182

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIH 234
           RV    +K++  DF+LWK S P EP W SP G   +GRPGWHIECSAM+  +LG+ FDIH
Sbjct: 183 RVDVAPYKRDVTDFVLWKPSKPGEPSWPSPAGIATQGRPGWHIECSAMAWKHLGEKFDIH 242

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL+FPHHENE+AQSCCA   ++ A  W+HNGFL +EG KMSKS GNF+TI++  + 
Sbjct: 243 GGGIDLVFPHHENEVAQSCCAFHTDRMATTWMHNGFLQVEGEKMSKSLGNFLTISDQRD- 301

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----A 350
                  W   V+RL ML THYR+PID+T   L+E    L +W +   S    DP     
Sbjct: 302 ------QWGPAVLRLNMLKTHYRQPIDWTQHNLSETGRELDRWFEFLESASGGDPNDAND 355

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI--- 407
           V+SAL +DLNT +AI AL    +   KN        +   +LGI + +E +     +   
Sbjct: 356 VMSALADDLNTSAAITALR--VQFKNKNS---AALRSGLDLLGIPIGREFIQGRKHVRLY 410

Query: 408 -------------------------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                                     I++L+  R      K F  +D IR QL + G +L
Sbjct: 411 AEGAFVAAGGGTATFSTASSSVERSDIQQLIDARAAARARKDFKESDRIRDQLAAMGVVL 470

Query: 443 EDYKNPDNGQRMTRWK 458
           +D K+ D G+  T W+
Sbjct: 471 KDGKDAD-GKPTTTWE 485


>gi|159044247|ref|YP_001533041.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|187629812|sp|A8LLR2|SYC_DINSH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157912007|gb|ABV93440.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 458

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 204/456 (44%), Positives = 271/456 (59%), Gaps = 25/456 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++K+ NT  R+   F  IDP N+RMYVCGPTVYD AH+GNARP +VFD+L+R+LR  YG
Sbjct: 4   TELKLTNTKTRRKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPAVVFDMLFRVLREVYG 63

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTYVRNITD+DDKI  RA +         +I  IT + T  +++D   L  L PTH 
Sbjct: 64  PEHVTYVRNITDVDDKINARAAE------TGRSIREITDETTGWYLEDMAALGTLPPTHV 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT +IPQM+ +I+ +I  GHAY A   ++FD  S   YG+ S R +D+   G RV   
Sbjct: 118 PRATEYIPQMVAMIETLIARGHAYVAEGHVLFDVRSYGAYGALSGRSVDDMIAGARVEVA 177

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL F
Sbjct: 178 PYKRDPMDFVLWKPSEAGLPGWDSPWGRGRPGWHIECSAMSHELLGESFDIHGGGNDLQF 237

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA      A +W+HN  L +EG+KMSKS GNF T+ +LL+      +  
Sbjct: 238 PHHENEIAQSCCAHPEGGFAKVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGV 291

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYNDL 359
           P  VIR   L THY +P+D+T ++  EA  +L KW              P+V++AL +DL
Sbjct: 292 PGEVIRFVFLGTHYSKPMDWTERKRDEAMAVLRKWRAAVAGTRPAPAAAPSVMAALVDDL 351

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-----VCKEHLNKNISIAIEKLVQ 414
           NT  AI  LH+L R+       LP   ASA ++G+              ++S    +L +
Sbjct: 352 NTPGAIAELHQLYRDGN-----LPGLLASAQLMGLLSDEMGGWDSSPQVDLSELAARLAE 406

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            R   +  K F+  D ++  L + G  +   K    
Sbjct: 407 VREAAIGTKDFTQVDRMKAALIAAGVEVRMSKAGVE 442


>gi|312868029|ref|ZP_07728233.1| cysteine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096433|gb|EFQ54673.1| cysteine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 447

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 172/465 (36%), Positives = 244/465 (52%), Gaps = 33/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I  G+AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L       ++
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------KT 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +DPA         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLQGFVDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           + A+  D+N  + I  + +LA+     H    + +A   +L        + + +   IE 
Sbjct: 346 IVAMDEDINAANGITVVFELAKWINSGHYNQDVKDALTKML-EVFGVVFVEEVLDADIEA 404

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L+ ER      K F+ AD IR +L ++G  L D K    G R TR
Sbjct: 405 LIAERQEARAKKDFARADAIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|58040207|ref|YP_192171.1| cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|61216109|sp|Q5FQ31|SYC_GLUOX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58002621|gb|AAW61515.1| Cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 452

 Score =  540 bits (1392), Expect = e-151,   Method: Composition-based stats.
 Identities = 199/464 (42%), Positives = 267/464 (57%), Gaps = 30/464 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R    F  +DP N+R+Y CGPTVYD AH+GN R M+  D+L RLLR  Y   
Sbjct: 9   LRLHDTHLRDKRPFTPLDPENVRVYFCGPTVYDRAHLGNLRAMMCADILIRLLRTMY--P 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TD+DDKI  RA++        + IS +T + TQ F +D   L  L P  +PR
Sbjct: 67  RVTYVRNVTDVDDKINARAKEN------GEDISALTERTTQAFHEDLASLFILPPDIEPR 120

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI  M+ +I  ++ +GHAY A   ++F   + P+YG  S R +D+   G RV    +
Sbjct: 121 ATHHIDDMLEMIGRLVENGHAYVAEGHVLFAVRNFPSYGELSGRSLDDMIAGARVEVAPY 180

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S P  PGW+SP+GRGRPGWHIECSAMS  YLG+ FDIHGGG DL+FPH
Sbjct: 181 KRDPGDFVLWKPSEPDLPGWDSPYGRGRPGWHIECSAMSHRYLGESFDIHGGGDDLLFPH 240

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS C     K A  W+HNG L   G KMSKS GNF TI E+L+         PA
Sbjct: 241 HENERAQSMCCYPHGKFATHWVHNGMLLSNGEKMSKSLGNFFTIREVLDRS-------PA 293

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYNDL 359
             +RL  L  HYR  +DF+ ++L EA  +L +  +            +  AV+ AL +DL
Sbjct: 294 EPLRLLYLGAHYRSTLDFSWEKLEEARRVLDRLYRALERGNAQPGTALPAAVMDALCDDL 353

Query: 360 NTVSAIQALHKLARESTKNHDLLP----IFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           NT  AI ALH LA  + +                 +  +   +   +   + AIEKL++E
Sbjct: 354 NTPLAIAALHPLADAAMQGDQDAASSLLAAGKLLGLFNVTPAEWFQSGVDASAIEKLIEE 413

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           RL   K + F+ AD IR QL + G  LED      G   T W++
Sbjct: 414 RLAARKSRDFARADAIRAQLAADGITLED------GPGGTTWRK 451


>gi|109894929|sp|Q21YS0|SYC_RHOFD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 459

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 174/472 (36%), Positives = 245/472 (51%), Gaps = 38/472 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R I     + P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+    
Sbjct: 1   MSLRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRN+TDIDDKII+RA      +   ++I  +T +      +D   L    PTH+
Sbjct: 61  --RVTYVRNVTDIDDKIIKRA------LENGESIRALTERMVDALHQDADALGIERPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  +PQM+ LI  +   G AY+A N ++ +     P YG  S + +DE + G RV  
Sbjct: 113 PRATEFVPQMLSLIGRLEQKGLAYQAVNGDVNYAVRKFPGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P DF+LWK + P EP    W+S +G+GRPGWHIECSAM    LG+  DIHGGG 
Sbjct: 173 ADGKDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A+IW+HNGF+  +  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILAR---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------II 347
              + A   R  ++  HYR  ++ +   L +A   L +                      
Sbjct: 288 ---YDAETTRFFIIRAHYRSALNHSDAHLDDARNSLKRLYTALDLVAPEPLLEIDWRQPF 344

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI-----EVCKEH 400
                +A+  D  T  A+  + +LA E  K  D  L  +  A    LG+     +V  + 
Sbjct: 345 AARFKAAMDEDFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFLQA 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                + +I  L+ +R      K F+ AD IR+ L ++G +L+D       +
Sbjct: 405 GATLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKDSAAGTVWE 456


>gi|238853164|ref|ZP_04643551.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238834218|gb|EEQ26468.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 472

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 166/493 (33%), Positives = 250/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        +  +  + F++DT  L     T  PR
Sbjct: 62  -VKYVSNFTDVDDKMINEARKEHTTVG------ELADRYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIQEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 175 EQSKKEDPIDFALWKAQKEDDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +     KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKKEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +     V+R  M    YR PI+++   L +AE +L ++  T  +              
Sbjct: 289 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLMDEQETLED 346

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN----------- 386
                         + A+ +D N  +A+  ++ L      +     +             
Sbjct: 347 SILRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLTSNLNTHLQKNQVDKPALKKAKKLLL 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+   ++         IE +V +R    K K ++ +D +R +L++KG ++ED  
Sbjct: 407 AWLEIFGVSFNEKQTEN--DDEIEVMVAKRDEARKNKNWAESDRLRDELQAKGIVIEDT- 463

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW +
Sbjct: 464 -----PQGTRWHR 471


>gi|116629010|ref|YP_814182.1| cysteinyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282852713|ref|ZP_06262055.1| cysteine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311111194|ref|ZP_07712591.1| cysteine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|122273992|sp|Q045X8|SYC_LACGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116094592|gb|ABJ59744.1| cysteinyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|282556455|gb|EFB62075.1| cysteine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311066348|gb|EFQ46688.1| cysteine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 472

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 166/493 (33%), Positives = 250/493 (50%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        +  +  + F++DT  L     T  PR
Sbjct: 62  -VKYVSNFTDVDDKMINEARKEHTTVG------ELADRYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIQEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 175 EQSKKEDPIDFALWKAQKDDDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +     KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +     V+R  M    YR PI+++   L +AE +L ++  T  +              
Sbjct: 289 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLMDEQETLED 346

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN----------- 386
                         + A+ +D N  +A+  ++ L      +     +             
Sbjct: 347 SILRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLTSNLNTHLQKNQVDKPALKKAKKLLL 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           A   I G+   ++         IE +V +R    K K ++ +D +R +L++KG ++ED  
Sbjct: 407 AWLEIFGVSFNEKQTEN--DDEIEVMVAKRDEARKNKNWAESDRLRDELQAKGIVIEDT- 463

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW +
Sbjct: 464 -----PQGTRWHR 471


>gi|300362340|ref|ZP_07058516.1| cysteine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300353331|gb|EFJ69203.1| cysteine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 472

 Score =  540 bits (1391), Expect = e-151,   Method: Composition-based stats.
 Identities = 166/493 (33%), Positives = 253/493 (51%), Gaps = 62/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ +    + MYVCGPTVY++ HIGNAR +I FD + R   Y   + 
Sbjct: 3   MKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+EH ++        + ++  + F++DT  L     T  PR
Sbjct: 62  -VKYVSNFTDVDDKMINEARKEHTTVG------ELANRYIKAFMEDTEALNIEPATLHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q++I  G AYE + ++ +     PNYG  S + I E + G        
Sbjct: 115 ATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHINEE 174

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK      E  W+SPWG+GRPGWHIECS MS+ YLG+  DIHGGG D
Sbjct: 175 EQNKKEDPIDFALWKAQKEDDEIAWDSPWGKGRPGWHIECSVMSTKYLGETIDIHGGGQD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +     KMSKS  NF+T++++L     
Sbjct: 235 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +     V+R  M    YR PI+++   L +AE +L ++  T  +              
Sbjct: 289 --KEIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLADEQEPLED 346

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN----------- 386
                         + A+ +D N  +A+  ++ LA     +     +             
Sbjct: 347 NTLRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLASNLNTHLQKDQVDKPALKKAKKLLL 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               I G+   ++  +      IE +V +R    K K ++ +D +R +L++KG ++ED  
Sbjct: 407 DWLEIFGVSFNEKQADD--DDEIEAMVAKRDEARKNKNWAESDRLRDELQAKGIVIEDT- 463

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW +
Sbjct: 464 -----PQGTRWHR 471


>gi|134094511|ref|YP_001099586.1| cysteinyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166200149|sp|A4G4M2|SYC_HERAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|133738414|emb|CAL61459.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Herminiimonas
           arsenicoxydans]
          Length = 462

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 189/479 (39%), Positives = 252/479 (52%), Gaps = 45/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R+   F  IDP  +RMYVCG TVYD+ HIG+AR M+VFD++ R LR    + 
Sbjct: 4   LKIYNTLAREKQLFTPIDPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGFD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII+RA +        + IS +T +      +D   L    P H+PR
Sbjct: 63  -VTYVRNITDIDDKIIKRAAEN------GETISQLTQRFIDAMDEDAAALGVQKPDHEPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           ATN++PQM+ LI  +  +G AY  A+ ++ +       YG  S + +D+ + G RV    
Sbjct: 116 ATNYVPQMLGLIDMLERNGLAYKAADGDVNYSVRDFAGYGKLSGKSLDDLRAGERVDVNT 175

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK S   EP    W S WG GRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 176 GKHDPLDFVLWKSSKENEPEEVKWSSKWGSGRPGWHIECSAMACELLGEQFDIHGGGADL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+LE       
Sbjct: 236 QFPHHENEIAQSEGASG-HTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLE------- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PA 350
            + A V+R  +L  HYR  ++++   L +A   L++                        
Sbjct: 288 KFDAEVVRFFILRAHYRSQLNYSDAHLDDARNALTRMYTALKDVAPDHLPLDMTEAHAVR 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--EVCKEHL----- 401
            + A+ +D NT  AI  L +LA E  +     L       A I+G+     ++ L     
Sbjct: 348 FIDAMNDDFNTPLAIAVLFELANEINREKSPVLARQLIGLAGIVGLLQRPAQQFLHAGLA 407

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               +   I   +  R    K K F+ AD IR  L  KG ILED         +T W++
Sbjct: 408 GADEMETLIIGQIAARADAKKAKNFAEADRIRAALLEKGIILEDKPGG-----LTEWRR 461


>gi|109898207|ref|YP_661462.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|109700488|gb|ABG40408.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 464

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 258/484 (53%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  +  S + +YVCG TVYD +H+G+AR  + FD++ R LR+   E 
Sbjct: 2   LHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA +        +  S +T +       D   +  LAP  +PR
Sbjct: 61  -VNYVRNITDIDDKIIQRANEN------GETTSELTERTIAMMHDDFAAIGLLAPDIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T H+P++I +I+ +I  GHAY+A + +++FD SS  +YG  S++ +D+  MG+RV    
Sbjct: 114 VTTHMPEIIAIIERLIQRGHAYQAKSGDVLFDVSSYADYGKLSKQDLDQLNMGSRVDVDS 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+  +LG+ FDIHGGG DLIFP
Sbjct: 174 DKDDPMDFVLWKTAKPGEPSWQSPWGDGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N W+H G + ++  KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCAYDT-PYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVL-------QQHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------AVLS 353
           A  +R  ++  HYR  + ++   +T+A   L +   +                       
Sbjct: 286 AETLRYFLMSAHYRSQLSYSQSNITQARSALERLYTSLRDVKANTQVDMHSADYLTRFDK 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-----------DLLPIFNASAHILGIE------- 395
           A+ +D NT  A+  L  +A+E  +             DL  +      +LGI        
Sbjct: 346 AMDDDFNTPEAMAVLFDVAKELNRAKAEGQEGHERASDLAGVLINLGKVLGILQRSPSEY 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +  E  + +    IE L++ R      K +++AD  R  L +   ILED      G   T
Sbjct: 406 LQGEQQDDDEVAEIEGLIKARNDARAAKDWAAADAARDGLNALNIILED------GPSGT 459

Query: 456 RWKQ 459
            W++
Sbjct: 460 TWRK 463


>gi|167563301|ref|ZP_02356217.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167570473|ref|ZP_02363347.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 465

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 181/485 (37%), Positives = 253/485 (52%), Gaps = 50/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ HIG+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +TS+ T     D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIRSLTSRFTDAMNADFDALGVERPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATEFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P EP    W+S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEEPVGASWDSKYGLGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
             ++ A V+R  ++ THYR P++++   L +A   L++   T+      D A        
Sbjct: 288 --NFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLY-TALKDATPDSAPLDWNEAH 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHILGI 394
                +A+ +D NT  A+  L +LA E  +  D             L  +       L  
Sbjct: 345 ARRFAAAMNDDFNTPVAVAVLFELATEVNRTRDPALARQLGRLAGLLGLLGREPREFLQQ 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                         IE  +  R+   + K ++ AD IR +L   G  LED          
Sbjct: 405 AAGTPRAGALEPEEIEAKIAARVAAKRAKNYAEADRIRAELLEAGIALEDKPGGS----- 459

Query: 455 TRWKQ 459
           T W++
Sbjct: 460 TEWRR 464


>gi|171320751|ref|ZP_02909762.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171094016|gb|EDT39118.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 465

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 175/484 (36%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------LENGETIKSLTDRFIGAMHEDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIETLETNGYAYQAGDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D+NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQG 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 TGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|21243088|ref|NP_642670.1| cysteinyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|24418693|sp|Q8PK23|SYC_XANAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21108603|gb|AAM37206.1| cysteinyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 476

 Score =  539 bits (1390), Expect = e-151,   Method: Composition-based stats.
 Identities = 193/496 (38%), Positives = 262/496 (52%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  SS   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSADLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T++EL+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
             P   +R A+L  HYR+P+D++   + +A+  L +   T      +             
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALQADSGNDVAPSRT 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----SAHILGI-------- 394
               V SAL +DLNT  A+  +  +A E+    + L          + +  +        
Sbjct: 346 IPVEVESALEDDLNTPLALSVIASIASEARALRNELVHGGEPSTRMSDLHAVHAKLLGAG 405

Query: 395 -----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             +      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDAGDDARITALVEERSTAKKAKDFARADAIRKQLAEEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|323465875|gb|ADX69562.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 474

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 174/495 (35%), Positives = 257/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 1   MKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 113 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR  I+++ + L +A  +L ++  T                 
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 344

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
              + +    +     A+ +D N  +A+ A++ L       A     +   L +F     
Sbjct: 345 DELAKAIAKTNEKFEVAMDDDFNVQNAVTAIYDLLPIVNANANAEKADKKSLKLFKDKLS 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + GI+  K       +    I++LV++R    K K ++++D IR QL+  G  ++D
Sbjct: 405 AWLLVFGIDTEKLCSQSAGSNDDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQD 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 465 T------PQGTRWTR 473


>gi|264677338|ref|YP_003277244.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207850|gb|ACY31948.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 461

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 253/478 (52%), Gaps = 44/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R +  F  ++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PT +
Sbjct: 61  K--VTYVRNITDIDDKIIKRA------VENGETIRSLTDRMIDALHQDADALGIERPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  
Sbjct: 113 PRATEYVPQMLGMIARLQDKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P DF+LWK +   EP    W+SP+G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 173 ADGKHDPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+N++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
            + + A  IR  ++ +HYR P++++   L +A   L +           +          
Sbjct: 286 -KEYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKRLYTALDLVTPAEVQIDWSNPYA 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGI------EVCKEH 400
               +A+  D  T  A+  L +LA E    K+ ++  +  A    LG+      +  +  
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGLLQAEPQKFLQAG 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                + AIE  +  R      K ++ AD IRK+L  +G +L+D          T W+
Sbjct: 405 AEGVDAAAIEAQIAARAEAKAAKNWAEADRIRKELLDQGIVLKDSAA------GTTWE 456


>gi|255994717|ref|ZP_05427852.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993430|gb|EEU03519.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 462

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 160/474 (33%), Positives = 241/474 (50%), Gaps = 48/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+  +  EF  I+     +YVCGPTVY+F H+GNARP++VFD L R L Y     
Sbjct: 1   MKIYNTMTGEKEEFVPINEGEANIYVCGPTVYNFFHLGNARPLVVFDCLRRYLEYIGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII +AR+E          + ++    +++ +D   L     +  P+
Sbjct: 59  RVNFVQNFTDVDDKIINKAREE------GITANEVSINYIKEYFQDAKALNVREASLHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++  +I  I+ +I  G AYE + ++ + T +   YG  S + IDE + G R+  +  
Sbjct: 113 VTENMSDIIAFIEKLITKGFAYEVDGDVYYKTRAFSEYGKLSHQNIDELEAGARINIEEK 172

Query: 185 KKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           K +P DF LWK    P E  WESPWG GRPGWHIECSAM+  +LG   DIH GG DL FP
Sbjct: 173 KHDPLDFALWKARKEPDEIAWESPWGLGRPGWHIECSAMAQKFLGDTIDIHAGGRDLCFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS         A  W+HNG++ +   K+SKS GNF T+ ELLE        + 
Sbjct: 233 HHENEIAQSEACTG-RPFARYWMHNGYITMNKEKVSKSKGNFFTVRELLE-------EFD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS- 353
              +R  +L  HYR PI+F+ + + +A+  L +  +   +         +G +    ++ 
Sbjct: 285 GETLRFFLLQGHYRNPIEFSKELIYQAKAGLDRIRRAKENLQYIIENGHEGEVSEDCINQ 344

Query: 354 ----------ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
                      + +DLNT  AI  + ++  +     +          L      ++ILG 
Sbjct: 345 LNKRIDSFKMHMEDDLNTADAITDIFEMVTDINSQLEKNGKEYARLALSKLQEVSNILG- 403

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
              +    + I   ++ L  ER    K K F  AD +R ++   G+ ++D    
Sbjct: 404 -FLQGEGTEEIPENVKILADERQEARKNKDFKRADELRDEVLKLGYEIKDMPEG 456


>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|226735052|sp|B8DKL0|SYC_DESVM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 485

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 177/499 (35%), Positives = 244/499 (48%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+   P  + MYVCG T YD  HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ RN TD+DDKII RA QE            +  K    F +D  RL  L    +PR
Sbjct: 60  -VTFARNFTDVDDKIITRANQEGL------TSQEVAEKYIATFYEDMDRLNVLRADLEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI L   +I    AY   + ++ F   + P YG  S R +D+ + G RV    
Sbjct: 113 ATTHIEEMISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  +L    DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +     W+HNGF+ +   KMSKS GNF TI ++LE       ++ 
Sbjct: 233 HHENEIAQTEAALG-KDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILE-------NYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
              +R  +L  HYR PIDFT + + EAE  L +  +                       +
Sbjct: 285 PETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRIYEALGLLHAELEREKWTSGPLPKDVT 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAH-- 390
                +  A   A+ +D+NT +A+  +  + R + +  D             F A     
Sbjct: 345 EEFEGLRQAFADAMEDDMNTAAALGHVFTMVRLANRILDNKGQRKTEGARAFFRAVLDEA 404

Query: 391 -----ILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LG            +  C+          +E+L+Q R+     K F+ AD IR 
Sbjct: 405 ATWFAVLGVFGREPAGFLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           ++ + G  + D  +     
Sbjct: 465 EIAALGIEVRDTPSGAVWD 483


>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 488

 Score =  539 bits (1389), Expect = e-151,   Method: Composition-based stats.
 Identities = 172/503 (34%), Positives = 251/503 (49%), Gaps = 65/503 (12%)

Query: 1   MK-KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           MK ++IK+YNTL  + T F+ + P  +++YVCG T Y+  HIGNARP + +DV+ R L++
Sbjct: 6   MKMEEIKVYNTLTGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKH 65

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
              +  V +V+N TD+DDKII +A  E            I+ +    + +    +     
Sbjct: 66  IGYK--VEFVQNFTDVDDKIINKANAE------GSDWKTISDRYIDAYFQVMDAMHVRRA 117

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
              PR ++H+  +I ++Q +I  GHAY   N++ +D S+  +YG+ S RKID+   G R+
Sbjct: 118 DVYPRVSDHMQDIIDMVQGLIDKGHAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARI 177

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K+NP DF LWK + P EP WESPWG+GRPGWHIECSAMS HYLGK FD HGGG D
Sbjct: 178 EVNEGKRNPGDFALWKGAKPGEPFWESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSD 237

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS      +   N W+HNGF+ +   KMSKS  NF    ++L       
Sbjct: 238 LIFPHHENEIAQSEGCTGCK-FVNYWLHNGFITINSEKMSKSLNNFFLAKDVL------- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------- 337
           + +    +R  +L   YR P+D++  RL EAE  + +                       
Sbjct: 290 KEYSGDALRYFLLSVQYRNPLDYSRDRLDEAEKNMERLSGVIRRLKELAAKEGAEKTDAS 349

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
                +      A   A+ +D NT  A  A+  LA+        +               
Sbjct: 350 RSLEKAAEESLKAFHEAMDDDFNTGLATGAMFDLAKAINIYGTAVDGGLSVDHEAVEKAY 409

Query: 384 -IFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                   ILGI     E      +K+ +  ++ ++  R    K K +  AD IR +L++
Sbjct: 410 TALKTIMDILGILEEVWEKTDSPDDKSYNDLMDIILAVRQTARKEKMYKIADEIRDRLDA 469

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
            G ++ED           RWK++
Sbjct: 470 AGIVIEDTPT------GARWKRR 486


>gi|290579657|ref|YP_003484049.1| putative cysteinyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996556|dbj|BAH87157.1| putative cysteinyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 447

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 168/465 (36%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+TL R + EF  I  + + MYVCGPTVY++ H+GN R  I FD + R   Y     
Sbjct: 2   IKIYDTLTRSLREFVPIHENTVNMYVCGPTVYNYIHVGNGRSAIAFDTIRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +             ++ K    F +D   L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAAK------AGMTTKALSDKFIAAFKEDVAALGVKPATENPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++  +I  +Q ++  G AYE++ ++ F      NY + + + ++E ++G       E
Sbjct: 114 VIDYMQDIIDFVQVLVDKGFAYESSGDVYFRVRKSDNYAALANKTLEELEIGASGRVDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 SDCKEDPLDFALWKAAKEGEIAWDSPWGAGRPGWHIECSVMATTILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +K AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KKFANYWMHNGFVNIDNEKMSKSLGNFITVHDALKTM------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+P +FT + + +AEI L     T        +D A         
Sbjct: 287 -DGQVLRFFFATQHYRKPFNFTEKAIRDAEINLKYLKNTYEQPFTATVDEATFIRFLEKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D NT + I  + +LA+     H    +   F     I G+   +E L+      
Sbjct: 346 QAAMDEDFNTANGITVVFELAKWINSGHYNQTVKDKFAEILQIFGVVFKEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IEKL++ER      + F+ AD IR  L ++G  L D K+     R
Sbjct: 402 IEKLIEERQKARAARDFTKADAIRDDLAAQGIKLLDTKDGVRWMR 446


>gi|309781263|ref|ZP_07676000.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308920084|gb|EFP65744.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 463

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 182/482 (37%), Positives = 262/482 (54%), Gaps = 46/482 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + +S +T +      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETMSALTGRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG+ FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ +   KMSKS GNF TI ++L      
Sbjct: 234 DLQFPHHENEIAQSEGATG-KTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIID----- 348
            + + A V+R  +L +HYR  ++++   L +A   L++         + +    D     
Sbjct: 287 -KLYDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNESH 345

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
               L A+ +D NT  A+  L +LA E  K     L     A A +LG+     H     
Sbjct: 346 GKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPALASQLAALAGVLGLLGRDPHAFLQG 405

Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +   +  +E  ++ER      + F+ AD IR  L + G +LED         +T W
Sbjct: 406 GVSPDGLDAAEVEARIEERRAAKAARDFARADAIRADLLAAGIVLEDKPGG-----VTEW 460

Query: 458 KQ 459
           ++
Sbjct: 461 RR 462


>gi|315037580|ref|YP_004031148.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312275713|gb|ADQ58353.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 477

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 169/495 (34%), Positives = 256/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   LKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGYK- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR  I+++ + L +A  +L ++  T                 
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 347

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
              + +    +   ++A+ +D N  +A+ A++ L       A     + + L +F     
Sbjct: 348 PDLAKAIEETEQKFVTAMDDDFNVQNALTAIYDLLPAVNANANSEKADKETLTLFEKKLA 407

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++  K       +    IE+LV++R      K ++++D +R QL+  G  ++D
Sbjct: 408 AWLLVFGVDTEKLCAQNAGSNDDEIEELVKKRDEARANKDWATSDKLRDQLKEMGITIQD 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 468 T------PQGTRWTR 476


>gi|6899996|emb|CAB71305.1| cysteinyl tRNA synthetase [Clostridium sticklandii]
          Length = 443

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 173/464 (37%), Positives = 252/464 (54%), Gaps = 55/464 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY+F HIGNARP ++FD     + Y   E  VTYV+N TD+DDKII+RA +E 
Sbjct: 1   MYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYE--VTYVQNFTDVDDKIIKRANEE- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                  +   +  K   ++ KD   L     T  PR T +I  +I  I+++I  G AYE
Sbjct: 58  -----GISPIEVAEKYIAEYFKDADALGIKRATVHPRVTENIENIITFIEDLISKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
            N ++ F++ +   YG  S++ ++E  +G R+     KK+P DF LWK     E GW+SP
Sbjct: 113 LNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDEKKHPIDFALWKAKKEGEIGWQSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG GRPGWHIECS MS+ YLG   DIH GG DLIFPHHENEIAQS      ++ A  W+H
Sbjct: 173 WGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQSEARSG-KQFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N++ +KMSKS GNF T+ ++L         +   VIR  +L  HYR P++F+ + +
Sbjct: 232 NGYINVDNQKMSKSLGNFFTVRDILS-------EFSGQVIRFFLLSAHYRNPVNFSKELI 284

Query: 328 TEAEILLSKWP----------------------QTSTSKGIIDPAVLSALYNDLNTVSAI 365
            +A+  + +                        +  ++        + A+ +D+NT  AI
Sbjct: 285 LQAKAGMERLANSKERLVFTISHAKGQMNESELELVSALENHRDRFIEAMDDDINTADAI 344

Query: 366 QALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
             + +LAR S  N             L +FN    +L I +  E  + N +  IEKL+++
Sbjct: 345 SIIFELARFSNTNVTENSSLEWAEKNLSLFNELTGVLNI-IKAEDTDSNDNEQIEKLIKD 403

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K K F+ AD IR +L+S G  +ED +      + T+WK+
Sbjct: 404 RVEAKKNKDFALADAIRDELKSMGIEIEDTR------QGTKWKK 441


>gi|257470811|ref|ZP_05634901.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317065015|ref|ZP_07929500.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690691|gb|EFS27526.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 473

 Score =  539 bits (1388), Expect = e-151,   Method: Composition-based stats.
 Identities = 186/493 (37%), Positives = 265/493 (53%), Gaps = 63/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIYNTL  K+ EF+ +    + MYVCGPTVY++ HIGNARP I FD + R   Y   + 
Sbjct: 2   IKIYNTLSGKVDEFKPVREGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
            V YV+N TD+DDK+I RA +E        ++  I  K  + + +DT+++        +P
Sbjct: 61  -VKYVQNFTDVDDKMIRRANEE------GVSLKDIAEKYIKAYFEDTSKVNLKEAGMIRP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEK 182
           +AT HI  MI +IQN+I  G+AYEA  ++ F+     + YG+ S++ +D+ K G R+   
Sbjct: 114 KATEHIGDMIEIIQNLIEKGYAYEAEGDVYFNVEKYKDGYGALSKQNVDDLKSGARIEVA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK +   EP WESPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 174 DIKKSPVDFALWKAAKEGEPSWESPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS C+   E  A  W+HNG++N+ G KMSKS G F+ + ++L+        +
Sbjct: 234 PHHENEIAQSKCSCGGE-FARYWMHNGYININGEKMSKS-GTFMLLRQVLD-------QF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPA-- 350
              VIRL +L  HYR+P+DF+   L +A+  L +               T +   D A  
Sbjct: 285 EGRVIRLFILGAHYRKPMDFSNYELNQAKSSLERIENALLRAKDALAADTKEDGADCAEL 344

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKN--HDLLP-------------IF 385
                      ++A+ +D NT   + A+ +L +E  K    D L              + 
Sbjct: 345 AEVLKSSSEKFVTAMDDDFNTAQGLGAIFELIKELNKALEEDKLSAKGKETVKETVDYVV 404

Query: 386 NASAHILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N    +LG I      +    S  +E +++ R      K ++ +D IR +L   G  ++D
Sbjct: 405 NIMQEVLGVILKLDNEVGNLTSELVEFILELRREARADKNWAMSDKIRDRLAEIGIKIKD 464

Query: 445 YKNPDNGQRMTRW 457
            K+       T W
Sbjct: 465 GKD------TTTW 471


>gi|325956062|ref|YP_004286672.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325332627|gb|ADZ06535.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 474

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 169/495 (34%), Positives = 256/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 113 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR  I+++ + L +A  +L ++  T                 
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 344

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
              + +    +   ++A+ +D N  +A+ A++ L       A     + + L +F     
Sbjct: 345 PDLAKAIEETEQKFVTAMDDDFNVQNALTAIYDLLPAVNANANSEKADKETLTLFEKNLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++  K       +    IE+LV++R      K ++++D +R QL+  G  ++D
Sbjct: 405 AWLLVFGVDTEKLCAQNAGSNDDEIEELVKKRDEARANKDWATSDKLRDQLKEMGITIQD 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 465 T------PQGTRWTR 473


>gi|190570547|ref|YP_001974905.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|254781699|sp|B3CN54|SYC_WOLPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|190356819|emb|CAQ54186.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 464

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 204/475 (42%), Positives = 279/475 (58%), Gaps = 38/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL +K   F  ID  +I+MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG+ 
Sbjct: 2   VKLYNTLTKKKEPFTPIDKDHIKMYVCGPTVYDTAHIGNARSIVVYDVLFRLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  I+   T+ F +D   + C  PT++P+
Sbjct: 61  -VTYVRNITDIDDKIINAANEK------NSNIESISKYYTKTFHEDMESINCAEPTYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  +I LI++++  GHAYE+N  + F   S P YG  S +KIDE   G+RV    +
Sbjct: 114 ATENIDNIIKLIESLLQAGHAYESNKHVYFSVESYPEYGVLSGKKIDELNYGSRVEVGEN 173

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +   +      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANETDYKLSSHWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  W+HNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAESTFAKYWVHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSA 354
                VIR A+L THYR+P+D+T   ++E++  L+K+ +         S   +    + A
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISESQETLNKFYRLLRSTCIEESDTEVSKDFIEA 347

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE---VCKEHLNKNI 405
           L NDLN   A+  LH++A E  K  +      L   F  SA  +GI      +   +   
Sbjct: 348 LKNDLNIPEAVAILHEMATEINKTSNEYEKLKLTKKFVKSARFIGILESSYQEWFASGVS 407

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              IE+L+  R +  + K + +AD IR+QL+  G  + D ++       T W  K
Sbjct: 408 HQEIERLIDLRKVAKQNKDYDTADKIREQLKQMGVTISDNEDGT-----TTWYGK 457


>gi|119897351|ref|YP_932564.1| cysteinyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|119669764|emb|CAL93677.1| CysS protein [Azoarcus sp. BH72]
          Length = 460

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 189/480 (39%), Positives = 257/480 (53%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL R    F+ I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LSIHNTLSRSKEVFRPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        ++I  +T +      +D   L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAQEN------GESIRALTDRFIAAMHEDADALGVLRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++  M  LI+ +   G AY A N+++ +       YG  S + +DE + G RV    
Sbjct: 114 ATDYVASMQSLIERLHAKGLAYVAANHDVCYAVRKFEGYGKLSGKSLDELRAGERVEVAG 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            KK+P DF+LWK +   EP    W SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DL
Sbjct: 174 EKKDPLDFVLWKHAKAEEPDEAKWASPWGSGRPGWHIECSAMSSDLLGEHFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI ++LET      
Sbjct: 234 QFPHHENEIAQSEGAHG-HAFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLET------ 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
            + A V+R  +L  HYR P++++   L +A   L++      S      A          
Sbjct: 287 -YDAEVVRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALRSVEAAPAAVDWTESHALR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCK---------E 399
             +A+ +D NT  A+  L +LA E  +  D  L     A   +LG+              
Sbjct: 346 FRAAMDDDFNTAEALAVLFELANEVNRGRDPLLAAQLKALGAVLGLLERDPVAFLQGSTP 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +      IE  +  R    K K F+ AD IR +L + G +LED      G   T W++
Sbjct: 406 AASGLGPEDIEARIAARAAAKKAKDFAEADRIRAELLAAGIVLED------GAGGTTWRR 459


>gi|239618081|ref|YP_002941403.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239506912|gb|ACR80399.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 458

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 172/469 (36%), Positives = 235/469 (50%), Gaps = 40/469 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  I P  +R+YVCGPTVY+F H+GN+RP I FD   R L Y     
Sbjct: 2   LRITNTLTGKKEEFIPITPGEVRIYVCGPTVYNFVHLGNSRPAITFDAFRRYLEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V   +N TDIDDKII +A +E            I  +   Q+ KD+  L        PR
Sbjct: 60  RVILAQNFTDIDDKIIIKANEEGVDAL------EIAERYIVQYWKDSLALGIRPANFHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ + ++I  IQ++I  G AY  + ++ F+ S   NYG  S RK+++   G R+     
Sbjct: 114 TTHFVDEIIEFIQDLIDKGFAYVVDGDVYFNVSEFKNYGELSHRKLEDMIAGARIEPGEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK +   EP W SPWG GRPGWHIECS MS+  LG+ FDIH GG DLIFPH
Sbjct: 174 KKSPEDFALWKAAKEGEPFWNSPWGPGRPGWHIECSVMSTCILGETFDIHAGGADLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS      +  A  W+HNG + L G KMSKS GNFITI + +       + +  
Sbjct: 234 HENEKAQSEARHG-KTFARYWMHNGMMRLAGSKMSKSLGNFITIKDAV-------KKYGK 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------------ 348
             IRL +   HYR PID++ + L E    + +          S+G               
Sbjct: 286 DAIRLFIFSKHYRSPIDYSEEMLAENLRAVKRVNAILRDFEKSEGDKPLFSKKTPFVKEQ 345

Query: 349 -PAVLSALYNDLNTVSAIQALHKLA------RESTKNHDLLPIF-NASAHILGIEVCKEH 400
               + AL +D NT  A+  +  L       +   +  ++  +  N    +LGI    E 
Sbjct: 346 IERFIEALDDDFNTPKAVALMFDLINKMGETKNRNRKLEIYHLIRNEFGPVLGILEKDEE 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           ++ NI   ++ L++ R    K K +  AD IR +L   G  L D     
Sbjct: 406 VSANIDGLVKLLIEIRAEFKKDKNYEKADQIRDRLNELGIKLMDTPEGT 454


>gi|327182876|gb|AEA31323.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 474

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 169/495 (34%), Positives = 256/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ +    I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 1   MKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++ +I  G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 113 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR  I+++ + L +A  +L ++  T                 
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 344

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
              + +    +   ++A+ +D N  +A+ A++ L       A     + + L +F     
Sbjct: 345 PDLAKAIEETEQKFVTAMDDDFNVQNALTAIYDLLPAVNANANSEKADKETLTLFEKKLA 404

Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A   + G++  K       +    IE+LV++R      K ++++D +R QL+  G  ++D
Sbjct: 405 AWLLVFGVDTEKLCAQNAGSNDDEIEELVKKRDEARANKDWATSDKLRDQLKEMGITIQD 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 465 T------PQGTRWTR 473


>gi|145629045|ref|ZP_01784844.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144978548|gb|EDJ88271.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 414

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 164/414 (39%), Positives = 229/414 (55%), Gaps = 34/414 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ +++ + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFREA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH 400
           + +D NT +A+  L ++ARE          K + L         ILG+      
Sbjct: 346 MDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPE 399


>gi|296877283|ref|ZP_06901323.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431803|gb|EFH17610.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 447

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 171/465 (36%), Positives = 244/465 (52%), Gaps = 33/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ R + EF  I+   +RMYVCGPTVY++ H+GNAR  + FD + R   Y   E 
Sbjct: 2   LKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII RA++E            +  K    F +D T L     T  PR
Sbjct: 61  -VAYISNFTDVDDKIINRAKEE------GITPQEVADKYIAAFREDVTALGVKPATRHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
               +  +I  + ++I   +AYE+  ++ F      NY   + + +++ ++G       E
Sbjct: 114 VVEFMDDIIRFVADLIEKDYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL 
Sbjct: 174 TARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L       ++
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------KT 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+PI+FT + + +AE  L     T      G +DPA         
Sbjct: 286 IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLEGFVDKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++A+  D+N  + I  + +LA+     H    + +A   +L        + + +   IE 
Sbjct: 346 IAAMDEDINAANGITVVFELAKWINSGHYNQDVKDALTKML-EVFGVVFVEEVLDADIEA 404

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           L+ ER      K F+ AD IR +L ++G  L D K    G R TR
Sbjct: 405 LIAERQEARAKKDFARADAIRDELAAQGIKLLDTK---EGVRWTR 446


>gi|121602424|ref|YP_988796.1| cysteinyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|187629794|sp|A1US43|SYC_BARBK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120614601|gb|ABM45202.1| cysteinyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 500

 Score =  538 bits (1387), Expect = e-151,   Method: Composition-based stats.
 Identities = 224/502 (44%), Positives = 306/502 (60%), Gaps = 51/502 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL RK  +F  ID S +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ YG+ 
Sbjct: 4   LRFYNTLTRKKEDFIPIDSSKVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVYGKD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI  RA +E+P + +NDAI  +T +   QF +DT  L CL PT+QPR
Sbjct: 64  HVIYARNVTDVDDKINARAIREYPKLTLNDAIHQLTERTYDQFQQDTEALGCLLPTYQPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKMGTRVPE 181
           AT+H+ +M  LI+ ++  GHAY A N ++F  +SI N   YG F++R ++E K G RV  
Sbjct: 124 ATDHLEEMRSLIERLLEKGHAYIAENHVLFSVNSIKNNPLYGVFAKRSLNEMKAGARVDV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSH-----YLG----- 228
             +K++  DF+LWK ST  EPGW+SP G    GRPGWHIECSAMS       Y G     
Sbjct: 184 APYKRDDMDFVLWKPSTQQEPGWKSPAGISVLGRPGWHIECSAMSMAKLLTPYGGGLACD 243

Query: 229 ----KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
                VFDIHGGG+DLIFPHHENEIAQSC     E+ AN W+HNGFL +EGRKMSKS GN
Sbjct: 244 DLSVNVFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGRKMSKSFGN 303

Query: 285 FITINELLETK---------KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           FITI  +LE+              +SW     R +ML THYREP+++T QRL ++   L 
Sbjct: 304 FITIRSILESNFVEFSNAMTDDLKQSWAGLSARFSMLQTHYREPLNWTAQRLAQSSSELY 363

Query: 336 KWPQT-------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +W +          + G+ID +++S L +DLNT ++   L K  +E              
Sbjct: 364 RWYELLRCERSCLDNGGVIDASLISTLSDDLNTPNSFTLLRKFYKEEN-----AVALVQG 418

Query: 389 AHILGIEVCKEHLN----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             + G+   +                 S  I++ + ERL+ ++ K++++AD IR +L  K
Sbjct: 419 MDLFGLLRQEWVREIECPLFVKGIDLDSKFIDQRIAERLLFIQNKEWAAADEIRNELAKK 478

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G  L+D K+   G+R+T W+ K
Sbjct: 479 GIALKDEKDSQTGERITTWEVK 500


>gi|313896271|ref|ZP_07829824.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975070|gb|EFR40532.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 475

 Score =  538 bits (1386), Expect = e-151,   Method: Composition-based stats.
 Identities = 163/494 (32%), Positives = 236/494 (47%), Gaps = 60/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L       
Sbjct: 2   LTVYNTMTRKKEEFHPLKEGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLARKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +             I+ +    +      L        PR
Sbjct: 60  RVRYIQNFTDVDDKIINAANR------AGVTWKEISDRYIAAYFTAMDALNVHRADVFPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  +  +I ++  +I  G+AY  +  ++ +      +YG  S R +D+ + G RV    
Sbjct: 114 VSETMEDIIRMVGTLIARGYAYATSEGDVYYSVEKFAHYGRLSGRSLDDMEAGARVEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIFP
Sbjct: 174 TKRHPMDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIFP 233

Query: 244 HHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  C D  EK A  W+HNGF+ ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQAEPCIDGHEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KEF 286

Query: 303 PAPVIRLAMLMTHYREPIDFTV--------------------QRLTEAEILLSKWPQTST 342
           P  VIR  +L THYR P+DF+                       L+  E           
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLREAEAALARLAHTKEVVDELSGREGTADTAAALVA 346

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------IFNA 387
                  A  +A+ +D NT  A+  +  L++E  +    L                 +  
Sbjct: 347 QAKDFLTAFDAAMDDDFNTALALSQMFGLSKEINRYRQELEHGTAFDAAHFAEAADAYRT 406

Query: 388 SAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            A I+GI   +    +       +E ++  R      K ++ AD IR +L+ +G +LED 
Sbjct: 407 MAEIIGIFEQEPAAVEGGLADGLMEIIIALRQDARVQKNWALADRIRDELKERGVVLEDT 466

Query: 446 KNPDNGQRMTRWKQ 459
                     RWK+
Sbjct: 467 PT------GVRWKR 474


>gi|282882291|ref|ZP_06290922.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297841|gb|EFA90306.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 467

 Score =  538 bits (1386), Expect = e-151,   Method: Composition-based stats.
 Identities = 174/483 (36%), Positives = 248/483 (51%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L  K  EF  I+   + MY CGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLFNSLTGKKEEFYPINSGKVTMYNCGPTVYNYIHVGNARPIVVFDTLRRY--FLYKGL 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDKII RA +E      N     I  K  ++F KD + L      T  P
Sbjct: 59  DVKFVLNFTDIDDKIINRANEE------NKTTEQIAEKYIEEFKKDASALGLYDYQTINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+ + QMI  IQ +I  G AY ++ ++ FD +    YG  S +KI++ + G+RV    
Sbjct: 113 RATHVVDQMISFIQTLIDKGAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRVDVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK     EP W++PWG GRPGWHIECS M+   LG   DIH GG DL FP
Sbjct: 173 LKRNPYDFALWKNKKENEPYWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGEDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   +     A  W+HNG + +   KMSKS GNF T+ E+        + + 
Sbjct: 233 HHENEIAQSETCNDA-PFARFWLHNGMITVNNEKMSKSKGNFFTVREV-------SKEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------STSKGII 347
             ++R  +L T YR PI+F+ + + + +  L +                    +  +  I
Sbjct: 285 LEILRFFLLTTSYRAPINFSREVMNQTKNALERLYNAKYKLEKDIELSKERDLTEDEKKI 344

Query: 348 DPAVLS-------ALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAH 390
           +    +       A+ +DLNT  AI A+  L ++   N D           + +      
Sbjct: 345 EEKFQAHRQSFEKAMEDDLNTADAITAIFDLVKDINVNLDENSAKKLLEEGMSLLKTLTK 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILGI + +E    ++   I  L++ER    K K F  AD IR +L  KG  ++D +    
Sbjct: 405 ILGI-MEREKNCDDLDEEILNLIKEREDARKNKDFKRADEIRDELLEKGIEIKDTRKGIE 463

Query: 451 GQR 453
            +R
Sbjct: 464 WKR 466


>gi|296158961|ref|ZP_06841789.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295890836|gb|EFG70626.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 465

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 174/484 (35%), Positives = 256/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +  +   +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIKALHEDADALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIERLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  +   HYR P++++   + +A   L++                      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALTRLYTALKDVTPDGAELDWNEAYA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL----- 401
               +A+ +D NT  A+  L +LA E  +  D  L     +   ++G+   +        
Sbjct: 346 QRFQAAMNDDFNTPVAVSVLFELASEVNRTRDSALARQLRSLGAVIGLLGREPRAYLQQA 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     + AIE  +  R    + K F++AD IR +L   G  LED         +T
Sbjct: 406 AGTAAVGALEAAAIEAKIAARAAAKQSKDFAAADRIRSELLEAGVALEDKPGG-----LT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|269926934|ref|YP_003323557.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269790594|gb|ACZ42735.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 453

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 163/464 (35%), Positives = 237/464 (51%), Gaps = 31/464 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+NTL  +  EF  ++P N+ MYVCGPTVY  AHIG+A    VFD++ R L Y   + 
Sbjct: 2   LYIHNTLTDRKEEFIPLNPPNVLMYVCGPTVYGPAHIGHAMSYTVFDIVRRYLEYKGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII R+ +E        +   + ++  ++F++    L  L   + PR
Sbjct: 61  -VKHVQNFTDVDDKIIARSNEE------GISWKDLATRYEREFLRQMDSLNILRAHYYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A+  IP++I  IQ +I  G+AY  + ++ F       YG  S R++DE + G R+     
Sbjct: 114 ASEVIPEIIEDIQRLIARGYAYVVDGDVYFRVLKDEEYGELSHRRLDEMRAGARIEADPR 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK +   EP WESPWG GRPGWHIEC+ M+   LG+  DIHGGG DLIFPH
Sbjct: 174 KEHPMDFALWKSAKLGEPYWESPWGPGRPGWHIECTTMNLRMLGEQIDIHGGGADLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS            WIHNG L LE  KM++S GN ++I        F  R + A
Sbjct: 234 HENEIAQSEAITGKHPFVRYWIHNGLLQLEEEKMARSVGNVLSI-------DFIVRQYGA 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IIDPAVLSALY 356
              RL +L +HYR+P++F+ + L  A+  + +  Q                     SA+ 
Sbjct: 287 DAFRLFVLSSHYRKPLNFSFEALESAKRGVLRLYQAVGEDAGPAGSEFKDFRQRFESAMD 346

Query: 357 NDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIEVCK-EHLNKNISIA 408
           +D NT  AI  L +LAR+                +    + +LG+ +             
Sbjct: 347 DDFNTPQAIAVLFELARDVNALRSEGKDASTAAGLLRELSALLGLRLDSVGGEATEAEPF 406

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           I+ +V  R  L   + +  +DYIR +L   G  + D       +
Sbjct: 407 IDLIVGVRDKLRASRIYELSDYIRDKLGELGVSVMDTPEGSKWR 450


>gi|328462973|gb|EGF34781.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 473

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 173/494 (35%), Positives = 258/494 (52%), Gaps = 61/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 1   MKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  K    F++DTT L     T  PR
Sbjct: 60  -VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 113 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 172

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR  I+++ + L +A  +L ++  T                 
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 344

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
              + +    +     A+ +D N  +A+ A++ L       A     +   L +F     
Sbjct: 345 DELAKAIAKTNEKFEVAMDDDFNVQNALTAIYDLLPIVNANANAEKADKKSLKLFKDKLS 404

Query: 387 ASAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           A   + GI+  K    + + +  I++LV++R    K K ++++D IR QL+  G  ++D 
Sbjct: 405 AWLLVFGIDTEKLCSQSADSNDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQDT 464

Query: 446 KNPDNGQRMTRWKQ 459
                  + TRW +
Sbjct: 465 ------PQGTRWTR 472


>gi|24378673|ref|NP_720628.1| cysteinyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|30316156|sp|Q8DWA9|SYC_STRMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24376535|gb|AAN57934.1|AE014867_6 putative cysteinyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 447

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 168/465 (36%), Positives = 240/465 (51%), Gaps = 36/465 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+TL R + EF  I  + + MYVCGPTVY++ H+GN R  I FD + R   Y     
Sbjct: 2   IKIYDTLTRSLREFVPIHENTVNMYVCGPTVYNYIHVGNGRSAIAFDTIRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +             ++ K    F +D   L     T  PR
Sbjct: 60  TVNYISNFTDVDDKIIKAAAK------AGMTTKALSDKFIAAFKEDVAALGVKPATENPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++  +I  +Q ++  G AYE++ ++ F      NY + + + ++E ++G       E
Sbjct: 114 VIDYMQDIIDFVQILVDKGFAYESSGDVYFRVRKSDNYAALANKTLEELEIGASGRVDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK +   E  W+SPWG GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 SDCKEDPLDFALWKAAKEGEIAWDSPWGAGRPGWHIECSVMATTILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +K AN W+HNGF+N++  KMSKS GNFIT+++ L+T       
Sbjct: 234 FPHHTNEIAQSEAKTG-KKFANYWMHNGFVNIDNEKMSKSLGNFITVHDALKTM------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------V 351
               V+R      HYR+P +FT + + +AEI L     T        +D A         
Sbjct: 287 -DGQVLRFFFATQHYRKPFNFTEKAIRDAEINLKYLKNTYEQPFTATVDEAVFARFLEKF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +A+  D NT + I  + +LA+     H    +   F     I G+   +E L+      
Sbjct: 346 QAAMDEDFNTANGITVVFELAKWINSGHYDQTVKDKFAEILQIFGVVFKEEVLD----AE 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           IEKL++ER      + F+ AD IR  L ++G  L D K+     R
Sbjct: 402 IEKLIEERQKARAARDFTKADAIRDDLAAQGIKLLDTKDGVRWMR 446


>gi|254420661|ref|ZP_05034385.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196186838|gb|EDX81814.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 469

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 182/487 (37%), Positives = 262/487 (53%), Gaps = 48/487 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + I++TL R+   F+  DP+ + +YVCGPTVYD+AHIGNARP +VFDVL RLLR  YG
Sbjct: 1   MPLHIHDTLHREKRLFEPRDPNRVTLYVCGPTVYDYAHIGNARPPVVFDVLVRLLRRTYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RN+TD+DDKI ++A +E   I        +T++    ++ D   L    P   
Sbjct: 61  ADHVIYARNVTDVDDKINQKAAREGVPIG------EVTARYEAAYLADMGLLNVSPPDLA 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  T++IP ++  IQ I+  G AY A   ++FD SS P+YG+ S R +D+   G RV   
Sbjct: 115 PHVTDYIPAIVAQIQAIVDAGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM    LG   DIHGGG+DL+F
Sbjct: 175 PYKKNPHDFVLWKPSKPDEPSWPSPWGEGRPGWHIECSAMIEQALGLPIDIHGGGIDLVF 234

Query: 243 PHHENEIAQSCCADRIEK-------TANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           PHHENEIAQ  CA    +        A  W+HNGFL ++  KMSKS GN + +++L+   
Sbjct: 235 PHHENEIAQGVCAHGHAQGDKAHDEYARYWMHNGFLTVDAEKMSKSVGNVLLLHDLV--- 291

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------- 348
               ++ P  V+R A+L  HYR+P+D+    L +++  L +          ++       
Sbjct: 292 ----QAMPGEVVRWALLSAHYRQPLDWNQGLLDQSKKSLDRLYGALHRSSGVEVLDLDPP 347

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEV--- 396
              + ++ +DLNT  A+ +L  L+ E  +                  A A ILG+     
Sbjct: 348 ADFMKSIEDDLNTPGAMASLFALSSEIERGMTAGDLDAVAQARARLMACASILGVLQSDP 407

Query: 397 ---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               +  ++  + I +E L+++R      K +  AD IR +L +   ++ D      G  
Sbjct: 408 AAWLEGDVSDALRIEVEALLEQRAAARAAKDWPEADRIRDRLNALNVVVMD------GPD 461

Query: 454 MTRWKQK 460
              W+ K
Sbjct: 462 GATWRMK 468


>gi|254469086|ref|ZP_05082492.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087896|gb|EDZ65179.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 453

 Score =  537 bits (1385), Expect = e-150,   Method: Composition-based stats.
 Identities = 183/474 (38%), Positives = 262/474 (55%), Gaps = 40/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+NT   K  +F+ I  ++++MYVCG TVYD  H+G+AR +IVFD++YR   +     
Sbjct: 2   IKIFNTFTSKKEKFKPITENHVKMYVCGMTVYDDCHVGHARVLIVFDLIYRW--FLNSGY 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII ++  +            +T +      +D+  L+ + PT QP+
Sbjct: 60  DVQYVRNITDIDDKIINKSNDQDCKFN------ELTDRYIDSMHEDSKALSVIPPTFQPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP MI +I  ++  G AY   N ++ F+ +   +YG  S++ +D+   G+RV    
Sbjct: 114 ATEAIPSMIKMISILVDKGFAYIGKNGDVFFEIAKFKDYGKLSKKNVDDLDAGSRVKIDD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KK+  DF+LWK S   EP W+SPWG GRPGWHIECSAMSS  LG+ FDIHGGG DLIFP
Sbjct: 174 NKKSFGDFVLWKLSKENEPSWQSPWGNGRPGWHIECSAMSSDILGESFDIHGGGQDLIFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS       K AN WIHNGF+N++  KMSKS GNF T+  +L       + + 
Sbjct: 234 HHENEIAQSESCHG-HKMANYWIHNGFVNVDDEKMSKSLGNFFTLKNVL-------KKYS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVLS 353
             V+R  +  +HYR P++++ Q L +A++ + K          I             +  
Sbjct: 286 GEVVRFFVYKSHYRSPLNYSDQNLNDAKVAVEKIYIALRPYKCIQVDLDWSKASLSKIKD 345

Query: 354 ALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCKEHL-----NKNIS 406
           AL +D N+  AI  + KL  +  K  N+DL     +    LG+    +       +K   
Sbjct: 346 ALDDDFNSPKAISIIFKLINQLNKGSNNDLANEIYSVLKALGLMAIPQEEFFTKSSKIDH 405

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             IEKL+Q+R      K +  AD +R +++S G +LED  +       T W+ K
Sbjct: 406 DHIEKLIQQRAQAKLQKDYQKADELRNEIDSLGVVLEDTAS------GTVWRIK 453


>gi|302382798|ref|YP_003818621.1| cysteinyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302193426|gb|ADL00998.1| cysteinyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 469

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 183/487 (37%), Positives = 258/487 (52%), Gaps = 48/487 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +++TL R+   F   DP  + +YVCGPTVYDFAHIGNARP +VFDVL RLLR  YG
Sbjct: 1   MTLFLHDTLHREKRAFVPRDPERVTLYVCGPTVYDFAHIGNARPPVVFDVLVRLLRREYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RN+TD+DDKI  +A +E   I        +T++    ++ D + L    P   
Sbjct: 61  AESVIYARNVTDVDDKINAKAHREGVPIG------DVTARYEAAYLADMSALNVTPPDIA 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  T H+  ++  I  I+  G AY A   ++FD SS P+YG+ S R +D+   G RV   
Sbjct: 115 PHVTGHMDAIVRQIGEIMDQGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM    LG   DIHGGG+DL+F
Sbjct: 175 PYKKNPHDFVLWKPSKPDEPSWPSPWGDGRPGWHIECSAMIEQTLGLPIDIHGGGIDLVF 234

Query: 243 PHHENEIAQSCCADR-------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           PHHENEIAQ  CA          +  +  W+HNGFL ++  KMSKS GN + +++L++T 
Sbjct: 235 PHHENEIAQGVCAHGHAHDADSHDAYSRYWMHNGFLTVDAEKMSKSVGNVLLLHDLVQT- 293

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------D 348
                  P  V+R A+L  HYR+P+D+    L ++   L +          +        
Sbjct: 294 ------IPGEVVRWALLSAHYRQPLDWNQSLLDQSRKNLDRLYGALRRAEAVAPLGDMPS 347

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI----- 394
           P  L+A+ +DLNT  A+  L  L+ E  +                  AS+ ILG+     
Sbjct: 348 PEFLTAISDDLNTPGAMATLFALSSEIERAMTAGDHHAVGIAKAELLASSRILGVLLSTP 407

Query: 395 -EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            +  +   +  +   +E L+ ER+     K ++ AD IR +L +   ++ D      G  
Sbjct: 408 DQWFEGGADDALKAEVEGLLAERVTARAEKNWAEADRIRDRLTALNVVVMD------GPT 461

Query: 454 MTRWKQK 460
              W+ K
Sbjct: 462 GATWRLK 468


>gi|161506926|ref|YP_001576880.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048174|sp|A8YTD3|SYC_LACH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160347915|gb|ABX26589.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 476

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 174/494 (35%), Positives = 257/494 (52%), Gaps = 61/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 4   VKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGYK- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  IQ +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 116 ATHEIKEIIAFIQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR  I+++ + L +A  +L ++  T                 
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 347

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
              + +    +     A+ +D N  +A+ A++ L       A     +   L +F     
Sbjct: 348 DELAKAIAKTNEKFEVAMDDDFNVQNALTAIYDLLPIVNANANAEKADKKSLKLFKDKLS 407

Query: 387 ASAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           A   + GI+  K    +   +  I++LV++R    K K ++++D IR QL+  G  ++D 
Sbjct: 408 AWLLVFGIDTEKLCSQSAGSNDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQDT 467

Query: 446 KNPDNGQRMTRWKQ 459
                  + TRW +
Sbjct: 468 ------PQGTRWTR 475


>gi|240850206|ref|YP_002971599.1| cysteinyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267329|gb|ACS50917.1| cysteinyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 502

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 234/504 (46%), Positives = 312/504 (61%), Gaps = 51/504 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K+++ YNTL RK   F  IDP+ +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ YG
Sbjct: 2   KELRFYNTLTRKKENFTPIDPTRVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITD+DDKI  RA  E+P++ +NDAI  +T +   QF +DT  L CL PT Q
Sbjct: 62  NEHVLYARNITDVDDKINARAVFEYPNLSLNDAIRQLTERTYCQFQQDTIALGCLLPTSQ 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRV 179
           PRAT H+ +M  LI+ ++  GHAY+A N I+F  SSI   P+YG+F+ R +DE + G R+
Sbjct: 122 PRATEHLEEMRSLIERLLEKGHAYKAENHILFSVSSIKNPPHYGAFANRSLDEMRAGARI 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL--------- 227
               +K+   DF+LWK S   EPGWESP G    GRPGWHIECSAMS   L         
Sbjct: 182 DVAAYKREEMDFVLWKPSVEGEPGWESPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGLT 241

Query: 228 -----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                  VFDIHGGGLDLIFPHHENEIAQSC A   E+ AN W+HNGFL +EG+KMSKS 
Sbjct: 242 CDDPTANVFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSKSF 301

Query: 283 GNFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           GNFITI  +LE               ++W     R +ML THYREP+++T QRL ++   
Sbjct: 302 GNFITIRSVLENNFLEFNGILIDEMKKNWAGLSARFSMLQTHYREPLNWTAQRLIQSSGE 361

Query: 334 LSKWPQTSTSK-------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
           L +W +   SK         I+  ++ AL +DLNT  A+  L K  +E       L + N
Sbjct: 362 LYRWYELLRSKKSEMENNEAINDTLIDALSDDLNTPKALTLLRKFYKEGN----ALALSN 417

Query: 387 ASAHILGI---EVCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              ++LG+   E  KE             S  I++ + ERL L+  K++ +AD IR +L 
Sbjct: 418 GM-NLLGLLRQEWIKEIDCPLFIKKTFLDSKFIDQRIAERLRLIHNKEWEAADTIRDELA 476

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
           ++G +L+D K+P +G+R+T W+ K
Sbjct: 477 AEGVLLKDSKDPQSGERITVWEIK 500


>gi|319404030|emb|CBI77618.1| Cysteinyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 502

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 225/503 (44%), Positives = 309/503 (61%), Gaps = 51/503 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++ YNTL R+  +F  ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3   ELRFYNTLTRRKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHIYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI  +A  ++P + +NDAI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYVRNITDVDDKINAKAALQYPDLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++ +LI+ ++  GHAY A+N I+F  SS+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRFLIERLLEKGHAYIADNHILFSVSSMGDNPRYGMFAKRSLDEMRAGARID 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL---------- 227
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L          
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGISVLGRPGWHIECSAMSMAKLLSPYGGGFVC 242

Query: 228 ----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG+DLIFPHHENEIAQSC     E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NFITI  LLE   F           + W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFITIRSLLEDDFFEFADILSAEVKQIWAGLSIRFSMLQTHYREPLNWTMQRLIQSSSEL 362

Query: 335 SKWPQTSTSKG-------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
            +W +   S+         +D +++  L NDLNT + I  L K  +E    H+++ + + 
Sbjct: 363 YRWYELLRSEKYCLEDNQTVDSSLIKTLSNDLNTSNTITILRKFYKE----HNVIALTHG 418

Query: 388 SAHILGIEVCKEHLNKNIS----------IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               LG+   +    K               I++ + ERL L+  K++++AD IR +L  
Sbjct: 419 M-DFLGLLRQELVKEKECPLFIGKTHLNLQFIDQRIAERLALIHNKEWAAADKIRDELAV 477

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
           +G  L+D K+P  G+R+T W+ K
Sbjct: 478 EGIFLKDSKDPQTGERITTWEMK 500


>gi|84686990|ref|ZP_01014873.1| cysteinyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84664964|gb|EAQ11445.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 457

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 212/450 (47%), Positives = 273/450 (60%), Gaps = 17/450 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK +NT  R    F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR  YG 
Sbjct: 3   EIKFHNTATRSKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLREVYGP 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRN TD+DDKIIERA ++   I        ITS+ TQ ++ D   L  L PT  P
Sbjct: 63  NHVTYVRNFTDVDDKIIERANRDGKEI------DQITSETTQWYLDDMAALGALEPTAMP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI  M+ +I+ +I  GHAY A   ++F   S  +YG  S R +D+   G RV    
Sbjct: 117 RATQHIDDMVTMIEGLIDSGHAYAAEGHVLFAVDSYDDYGKLSGRSVDDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK +   EPGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 177 YKRNPMDFVLWKPARDGEPGWDSPWGRGRPGWHIECSAMSYGLLGESFDIHGGGNDLMFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+++LLE      +  P
Sbjct: 237 HHENEIAQSKCAHAGAGFANVWLHNEMLQVEGKKMSKSLGNFFTVHDLLE------QGVP 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--PQTSTSKGIIDPAVLSALYNDLNT 361
             VIR   L THYR+P+D+T ++  EAE  L KW   + S   G +  A++ A+ NDLNT
Sbjct: 291 GEVIRFVFLGTHYRKPMDWTEKKREEAEATLGKWHRMRGSNKPGAVPKAIVDAVANDLNT 350

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILG---IEVCKEHLNKNISIAIEKLVQERLI 418
             AI  LHKLA        L  +       +    +++ +E   + +S    KL Q R+ 
Sbjct: 351 PEAISVLHKLANIGDIEGLLGGLDFLGLKTIDTEMLDLIREGEQERLSELEAKLTQLRIG 410

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            +  K +S  D ++  L + G  +   K  
Sbjct: 411 AMNTKDYSQVDAMKSALIAAGVEVRMSKAG 440


>gi|260102407|ref|ZP_05752644.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083775|gb|EEW67895.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 476

 Score =  537 bits (1384), Expect = e-150,   Method: Composition-based stats.
 Identities = 173/494 (35%), Positives = 258/494 (52%), Gaps = 61/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ + P  I MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 4   VKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGYK- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A  E  ++P       +  K    F++DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I ++I  +Q +I  G+AYE++ ++ +      +YG  S + I+  + G        
Sbjct: 116 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             +     V+R  M    YR  I+++ + L +A  +L ++  T                 
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 347

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFN---- 386
              + +    +     A+ +D N  +A+ A++ L       A     +   L +F     
Sbjct: 348 DELAKAIAKTNEKFEVAMDDDFNVQNALTAIYDLLPIVNANANAEKADKKSLKLFKDKLS 407

Query: 387 ASAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           A   + GI+  K    + + +  I++LV++R    K K ++++D IR QL+  G  ++D 
Sbjct: 408 AWLLVFGIDTEKLCSQSADSNDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQDT 467

Query: 446 KNPDNGQRMTRWKQ 459
                  + TRW +
Sbjct: 468 ------PQGTRWTR 475


>gi|298490116|ref|YP_003720293.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298232034|gb|ADI63170.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 486

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 172/506 (33%), Positives = 241/506 (47%), Gaps = 70/506 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R+   F  ++P  ++MY CG TVYD+ H+G+AR  I++DV+ R L+    
Sbjct: 1   MTLSIYNTLTRRQEPFTTVEPGKVKMYCCGVTVYDYCHLGHARACIIWDVVRRYLQLIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V Y++N TDIDDKI+ RARQE         +  +  +  Q + +D +RL        
Sbjct: 61  D--VRYIQNFTDIDDKILNRARQEK------STMEAVAERYIQAYFEDMSRLGIKEANEY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
           PRAT+ +  +  LI ++   G AY AN ++ +       YG  S RK+++ ++G      
Sbjct: 113 PRATHTMNGIQRLIHDLEHKGFAYPANGDVYYAVQKFDEYGKLSGRKLEDLQLGASERVN 172

Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E   K+ P DF LWK     EP WESPWG+GRPGWHIECSAM    LG   DIH G
Sbjct: 173 IEDAEYQKKQYPFDFALWKAVKQGEPAWESPWGKGRPGWHIECSAMVRERLGDTIDIHTG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS      +  AN W+HNG + ++G KMSKS GNF TI  LL+   
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRNLLD--- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
              R      +RL +LM  YR+PIDFT + +  A        Q                 
Sbjct: 289 ---RGVDPMALRLFVLMAQYRKPIDFTDEAILAATNGWYTLRQGLLFGYQYGKKLGTGEW 345

Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------ 382
                 + +           + +D N    +  + +LA+E  +  +++            
Sbjct: 346 GLGIRNNLTSNTYIERFKEVVNDDFNFPGGLAVIFELAKELIREKNIIVHQGKTETPPDK 405

Query: 383 -----PIFNASAHILGIEVCKE----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                      A +LG+    E      +      IE L+Q+R    K K F+ +D IR 
Sbjct: 406 LLQEWQTLVTLADVLGLTAQLEIETISEDALTDAEIEDLIQKRQEARKGKNFAESDCIRD 465

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
            L SKG  L D          TRW +
Sbjct: 466 DLLSKGITLIDNC------EGTRWHR 485


>gi|221068474|ref|ZP_03544579.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713497|gb|EED68865.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 461

 Score =  537 bits (1383), Expect = e-150,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 250/478 (52%), Gaps = 44/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R +  F  ++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    PT +
Sbjct: 61  K--VTYVRNITDIDDKIIRRA------VENGETIRSLTDRMIDALHQDADALGIERPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+A N ++ +       YG  S + +DE   G RV  
Sbjct: 113 PRATEYVPQMLGMIAKLQDKGLAYQAGNGDVNYAVRKFAGYGKLSGKSLDELNAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P DF+LWK +   EP    W+SP+G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 173 ADGKLDPLDFVLWKSAKADEPADVKWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+N++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFAQTWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
            + + A  IR  ++ +HYR P++++   L +A   L +           +          
Sbjct: 286 -KEYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKRLYTALDLVAPAEVQVDWSNPYA 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGI------EVCKEH 400
               +A+  D  T  A+  L +LA E    K+ ++  +       LG+      +  +  
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKTLGACLGLLQAEPQKFLQAG 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                + AIE  +  R      K ++ AD IRK+L  +G +L+D          T W+
Sbjct: 405 SEGVDAAAIEAQIAARAQAKAAKNWAEADRIRKELLEQGIVLKDSAA------GTTWE 456


>gi|325299474|ref|YP_004259391.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
 gi|324319027|gb|ADY36918.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
          Length = 492

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 167/492 (33%), Positives = 244/492 (49%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MENKLIIYNTLSRRKEPFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLLRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIKLVEEILKNGYAYESQGSVYFDVAKYNKDHHYGVLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 INTTRELDGQQEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGRKYLGETF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A         W+HN  + + G+KM KS GNFIT+ E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASEGHPMVRYWMHNNMITINGQKMGKSLGNFITLEEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------S 341
              + K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +          S
Sbjct: 298 FTGSNKLLAQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGIKNLERITPS 357

Query: 342 TSKGIIDPA-----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------- 389
            S   I+PA        A+ +DLNT   I  L    R      D     +A+        
Sbjct: 358 ASTSGIEPAGLREKCYEAMNDDLNTPIVISHLFDGIRMINTVLDKKATISAADLEELKSV 417

Query: 390 ------HILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                  ILG++   E+     +  S  ++ L++ER+     K ++++D IR  L + GF
Sbjct: 418 FHLFAFDILGLKAEGENNAAREEAFSKVVDMLLEERMKAKANKDWATSDKIRDSLAALGF 477

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 478 EVKDTKDGFTWR 489


>gi|329890424|ref|ZP_08268767.1| cysteinyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
 gi|328845725|gb|EGF95289.1| cysteinyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
          Length = 468

 Score =  536 bits (1382), Expect = e-150,   Method: Composition-based stats.
 Identities = 183/484 (37%), Positives = 262/484 (54%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I++TL R+   F+  DP+ + +YVCGPTVYD+AHIGNARP +VFDVL RLLR  YG  
Sbjct: 3   LHIHDTLRREKRLFEPRDPNRVSLYVCGPTVYDYAHIGNARPPVVFDVLVRLLRRTYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RN+TD+DDKI  +A +E        AI  IT++    ++ D   L    P   P 
Sbjct: 63  KVVYARNVTDVDDKINAKAAKE------GVAIGEITARYEAAYLADMGLLNVSPPDIAPH 116

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T++I  +   IQ II  G AY A   ++FD SS P+YG+ S R +D+   G RV    +
Sbjct: 117 VTDYIEAITRQIQAIIDAGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVAPY 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM    LG   DIHGGG+DL+FPH
Sbjct: 177 KKNPHDFVLWKPSKADEPSWPSPWGEGRPGWHIECSAMIEETLGLPIDIHGGGIDLVFPH 236

Query: 245 HENEIAQSCCADR-------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           HENEIAQ  CA          ++ A  W+HNGFL ++  KMSKS GN + +++L+     
Sbjct: 237 HENEIAQGVCAHGHAHGEEAHDEYARYWMHNGFLTVDAEKMSKSIGNVLLLHDLV----- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------- 350
             ++ P  V+R A+L  HYR+P+D+    L ++   L +          ++ A       
Sbjct: 292 --QAMPGEVVRWALLSAHYRQPLDWNQTLLEQSRKNLDRLYGALHRAAGVEAAEVEPPVE 349

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEH- 400
            + ++ +DLNT  A+ AL  L+ +  +           +      A+A ILG+       
Sbjct: 350 FMKSIEDDLNTPGAMAALFALSSDIERGMTAGDEGAVAEAKGRLIAAASILGVLQADPAE 409

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
               +++ +   +E L+++R      K ++ AD IR +L     ++ D      G +   
Sbjct: 410 WFSGVDEGLKAEVEGLLEQRAAARTAKNWAEADRIRDRLNELNVVVMD------GPQGAT 463

Query: 457 WKQK 460
           W+ K
Sbjct: 464 WRMK 467


>gi|229083409|ref|ZP_04215757.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228699842|gb|EEL52479.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 440

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 167/464 (35%), Positives = 240/464 (51%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   E  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + + +  I  +  + + +D T L C   T  PR T ++  +I  I+ ++  G+AYE
Sbjct: 57  ----LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ + T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWPQTSTSK---------------------GIIDPAVLSALYNDLNTVSAIQ 366
                 L +      +                           A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLVEIEKFQLAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ LA  + +               +  F     ILG+E+ KE L   +   IE L+Q+
Sbjct: 345 ELYNLANHANQYLLEEHTSKVVIEAYVKQFETLFGILGLELTKEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439


>gi|170699316|ref|ZP_02890365.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170135808|gb|EDT04087.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 465

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 175/484 (36%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------LENGETIKSLTDRFIGAMHEDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D+NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 TGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|109894898|sp|Q30ZH8|SYC_DESDG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 485

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 180/499 (36%), Positives = 247/499 (49%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  +F         +YVCG T YD  H+G+AR  + FDVL R LR+   + 
Sbjct: 1   MQLYNTLTRKKEKFIPQREGKASVYVCGITAYDLCHLGHARSSVAFDVLVRYLRHTGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII+RA +           + +  K    F +D  RL CL    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKRAGETGL------TSTEVAEKYMAAFHEDMDRLGCLRADIEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI +MI L +++I  G AY  A+ ++ F   S  +YG  S R +D+ + G RV    
Sbjct: 113 CTQHIGEMIALCEDLISKGKAYSTASGDVYFRVRSFASYGKLSGRDVDDMRSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  +L    DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKSAKPGEPYWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   E  A  W+HNGF+ +   KMSKS GNF TI ++L       + + 
Sbjct: 233 HHENEIAQTEAATGKE-FARYWVHNGFVQVNAEKMSKSLGNFSTIRDIL-------QGYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
              +R  +L  HYR PIDFT   + EAE  L +  QT                       
Sbjct: 285 PETLRYFLLTKHYRSPIDFTFDGMDEAEKNLRRIYQTLNLVENELQKTKWSAAPLPEEVL 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASA 389
           +     + A   A+ +DLNT +A+  +  L R   +              D L    +  
Sbjct: 345 SEMDETERAWNEAMEDDLNTAAALGHIFGLVRLVNRIIEDKTMRKSAQARDALLRMQSMM 404

Query: 390 ----HILGI------EVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LG+      E  +E  +         +  +E L+ ER    K K F  +D IR+
Sbjct: 405 ARWGAVLGLFTRQPAEFLREMRDCRAARRDVDTARVETLLLERQEARKAKDFERSDAIRE 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L   G  ++D        
Sbjct: 465 ELARMGVEVQDTPAGAAWD 483


>gi|57239053|ref|YP_180189.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578996|ref|YP_197208.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819263|sp|Q5HBK5|SYC_EHRRW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57161132|emb|CAH58045.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417622|emb|CAI26826.1| Cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 457

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 201/473 (42%), Positives = 275/473 (58%), Gaps = 39/473 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R    F  +D +N+++YVCGPTVYDFAHIGN+R ++++D+L+RLL   Y    V
Sbjct: 3   IYNTLTRSKELFVPLDVNNVKIYVCGPTVYDFAHIGNSRSIVIYDILFRLLNVLY--PKV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY+RNITDIDDKII  A+        N  I  +T++  + F +D  RL CL PT++PRAT
Sbjct: 61  TYIRNITDIDDKIINVAQNN------NQNIYDVTARYIKAFNEDMGRLNCLKPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I  M+ LI+ +I +GHAY  +N + FD  S P YG  S R I E   G+R+  +  KK
Sbjct: 115 ENIDVMLALIEKLINYGHAYICDNTVFFDIESYPAYGKLSGRNIMELIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS +YLG+ FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATDIDNKLMSCWPSPWGVGRPGWHIECSAMSYNYLGENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQSCCA      A  WIHNGFL +   KMSKS GNF+T+ +LL++   G    
Sbjct: 235 PHHENELAQSCCAFPNSYYAKYWIHNGFLTVNHEKMSKSLGNFLTVRQLLDSGIRG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDPAVLSA 354
              VIR   L THYR+P+D+    ++ A+  L++          +       +   ++S 
Sbjct: 291 --EVIRYIFLSTHYRKPLDWNDNVVSNAQESLNRIYMALNVTDERLLLDDVEVSDEIISC 348

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIEV--CKEHLNKNIS 406
           L +D+NT  AI  LH++     K  D+      + +   SA+ LGI     +E    +  
Sbjct: 349 LKDDMNTPKAIAVLHEMVTRINKASDIDKKVYFIKVLIKSANFLGILYHSWQEWFKVDND 408

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             I +L+ ER +      F  AD IR+ L  KG +L D K+       T W +
Sbjct: 409 QDIIQLIHERKMAKTNGDFRKADRIRQILLDKGIVLSDNKDGT-----TLWYR 456


>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
 gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
          Length = 571

 Score =  536 bits (1381), Expect = e-150,   Method: Composition-based stats.
 Identities = 188/509 (36%), Positives = 270/509 (53%), Gaps = 74/509 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            +++ +YNT  RK  +F+  DP   + MYVCG T YD +HIG+AR  + FDVLYR LRY 
Sbjct: 71  TRELHLYNTKSRKKEQFRPRDPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL 130

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+
Sbjct: 131 DYE--VRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRFSDDFLSDMANLQCLPPS 182

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR ++HI ++I +I+ I+ +  AY    ++ F   + P YG  S RK+D+ + G RV 
Sbjct: 183 VEPRVSDHIHEIINMIKQILDNSCAYVVGGDVYFSVENFPEYGELSGRKLDDNRAGERVA 242

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DL
Sbjct: 243 VDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDL 302

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   + T N WIHNGF+N+  +KMSKS GNF+TI +++E       
Sbjct: 303 IFPHHENEIAQSRAA-CCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM------ 355

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
            +    +R+ +L THYR PI++T+++L  A   L    QT                    
Sbjct: 356 -YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEESCQQQGSNTGNSLP 414

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                    +     +++ +DL+T  A+ A+ +  +               K  + L   
Sbjct: 415 PNTLNYIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLEALSAL 474

Query: 386 NA----SAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSAD 429
           +        +LG+      E  ++  +K +         + + ++ER    K K++  +D
Sbjct: 475 DEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVLQKIEERTAARKAKQYEKSD 534

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            IRK+L + G  L D      G   T W+
Sbjct: 535 EIRKELAAVGIALMD------GPNGTTWR 557


>gi|212723404|ref|NP_001131561.1| hypothetical protein LOC100192902 [Zea mays]
 gi|194691858|gb|ACF80013.1| unknown [Zea mays]
          Length = 573

 Score =  535 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 189/509 (37%), Positives = 270/509 (53%), Gaps = 74/509 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            +++ +YNT  RK  +F+  DP   + MYVCG T YD +HIG+AR  + FDV+YR LRY 
Sbjct: 73  TRELHLYNTKSRKKEQFRPRDPGGEVGMYVCGITPYDDSHIGHARAYVAFDVVYRYLRYL 132

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+
Sbjct: 133 DYE--VRYVRNFTDIDDKIIARANQ------LGEDPFNLSKRFSDDFLLDMANLQCLPPS 184

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR ++HI ++I +I+ I+ +  AY    ++ F   S P+YG  S RK+D+ + G RV 
Sbjct: 185 VEPRVSDHIDEIINMIKQILDNSCAYVVGGDVYFSVDSFPDYGELSGRKLDDNRAGERVS 244

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DL
Sbjct: 245 VDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDL 304

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A   + T N WIHNGF+N+  +KMSKS GNF+TI +++E       
Sbjct: 305 IFPHHENEIAQSRAA-CCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM------ 357

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
            +    +R+ +L THYR PI++T+++L      L    QT      I             
Sbjct: 358 -YHPLALRMFLLGTHYRSPINYTIEQLNVTSDRLYYTYQTLLDCEEICQQQQSNTGNSLP 416

Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNAS 388
                          +++ +DL+T  A+ A+ +  +            K    L   +A 
Sbjct: 417 ANTLNYIQKLHEEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLESLSAL 476

Query: 389 -------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSAD 429
                    +LG+      E  ++  +K +         + + ++ER    K K++  +D
Sbjct: 477 EEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAARKAKQYEKSD 536

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            IRK+L + G  L D      G   T W+
Sbjct: 537 EIRKELAAIGIALMD------GPDGTTWR 559


>gi|315498776|ref|YP_004087580.1| cysteinyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315416788|gb|ADU13429.1| cysteinyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 463

 Score =  535 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 193/482 (40%), Positives = 258/482 (53%), Gaps = 42/482 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+++ +TL+R   +F   +P  + MYVCGPTVY++AHIGNARP++VFDVL+RLLRY YG
Sbjct: 1   MKLRLSDTLKRHKVDFVPKNPQRVTMYVCGPTVYNYAHIGNARPVVVFDVLFRLLRYIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E+ V Y RNITD+DDKI ++A  E         I +ITSK    +  D   L  L PT Q
Sbjct: 61  EEAVIYARNITDVDDKINQKAMAE------GVDIDVITSKFADIYNADMRALNALEPTIQ 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  ++  I  +I +GHAY A   ++FD  S   YG+ S R +D+   G RV   
Sbjct: 115 PRVTQNMSAIVAQIAALIRNGHAYAAEGHVLFDVESYRAYGALSNRSLDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM    LG   DIHGGG DLIF
Sbjct: 175 PYKKNPQDFVLWKPSKPGEPKWPSPWGEGRPGWHIECSAMIEANLGLPIDIHGGGHDLIF 234

Query: 243 PHHENEIAQSCCADRIE-----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           PHHENEIAQ  CA           A  W+HNGFL ++  KMSKS GN + +++L+     
Sbjct: 235 PHHENEIAQGVCAQHGHSHQEESYARYWMHNGFLTMDAEKMSKSLGNVLLVHDLI----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPA 350
             + +P  VIRLA+L  HYR P+D+    L +    L    +              +  A
Sbjct: 290 --KEFPGEVIRLALLSAHYRAPLDWNSDLLVQTRKRLDGLYEALRKAANVPVVETAVPEA 347

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEV------CKE 399
           V+ AL +DL+T   +  L  LA    K              A+  ++GI         K 
Sbjct: 348 VIDALCDDLSTPRVLAELSALASALEKASQSEKPLAKAQLLAAGALMGILQQEAESWFKG 407

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + ++S  +E L+  R      K ++ AD IR +L +    + D      G     WK 
Sbjct: 408 GADDDLSAKVETLLIARKTARAEKNWAEADRIRNELTALNVEVMD------GPEGATWKL 461

Query: 460 KP 461
           K 
Sbjct: 462 KA 463


>gi|332141401|ref|YP_004427139.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551423|gb|AEA98141.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 460

 Score =  535 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 171/480 (35%), Positives = 256/480 (53%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  R+  +F  +    + +YVCG TVYD +H+G+AR  + FDVL R LR+   + 
Sbjct: 2   LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        ++   +T++      +D   +  L P  +P 
Sbjct: 61  -VKYVRNITDIDDKIIARANEN------GESFEALTARTIAMMHEDFAAINLLEPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + H+ ++I +IQ ++  G+AY+A + +++FD S   +YG  S++ +D+ K G RV    
Sbjct: 114 VSGHMDEIIEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 GKDDPLDFVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N+W+H G + +   KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCAYDT-PYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVL-------KEHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLS 353
           +  +R  ++  HYR  + ++   +T+A+  L +             T  S G       +
Sbjct: 286 SETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVVVNESTDLSYGGYLARFEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHL----- 401
           A+ +DLN   A   L  +ARE  +  D       L  +      ILG+            
Sbjct: 346 AMNDDLNVPEAFSVLFDVARELNRQKDNAEEAGKLAAVLKGLGAILGMLQSDPDTYLKGG 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N + +  IE L+++R      K +++AD  R  L +KG +LED      G   T W++
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLED------GPSGTTWRK 459


>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 573

 Score =  535 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 188/508 (37%), Positives = 263/508 (51%), Gaps = 74/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + + +YNT  R+   F+   P   + MYVCG T YD +HIG+AR  + FDVL+R LRY  
Sbjct: 72  RDMHLYNTRSRRREPFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFRYLRYLD 131

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+ 
Sbjct: 132 YE--VRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMAHLQCLPPSV 183

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI Q++ +I+ II +G AY  + ++ F   + P Y   S RK+D+ + G RV  
Sbjct: 184 EPRVSDHIDQIVTMIKQIIDNGCAYVVSGDVYFSVDNFPEYRKLSGRKLDDNRAGERVAV 243

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+ YLG  FDIHGGG DLI
Sbjct: 244 DERKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLI 303

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A       N W+HNGF+N+ G+KMSKS GNFITI +++E        
Sbjct: 304 FPHHENEIAQSRAACCDSS-INYWVHNGFVNVNGQKMSKSLGNFITIRKVIEL------- 355

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
           +    +R+ +L THYR PI++TV++L  A   L    QT                     
Sbjct: 356 YHPLALRMFLLGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQQDQSSSGDSLPF 415

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNAS- 388
                   +     +++ +DL+T  A+ A+ +  +            K    L    A  
Sbjct: 416 TTTHCIEKLHEDFETSMSDDLHTSVALAAVSEPLKVMNDLLHTRKGKKQEKRLESLAALE 475

Query: 389 ------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADY 430
                   +LG+      E  ++   K +         + + ++ER    K K+F  +D 
Sbjct: 476 EKVRMVLSVLGLMPSSYHEALQQLRGKALRRACVTEEQVLQKIEERTAARKAKQFGRSDE 535

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR +L + G  L D      G   T W+
Sbjct: 536 IRDELAALGIALMD------GPDGTAWR 557


>gi|172061028|ref|YP_001808680.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|229558620|sp|B1YSM8|SYC_BURA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|171993545|gb|ACB64464.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 465

 Score =  535 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 174/484 (35%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------LENGETIKSLTDRFIGAMHEDEAALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVQPDALALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASA-----------HILGIE 395
               +A+ +D+NT  A+  L +LA E  +  +  L       A             L   
Sbjct: 346 QRFAAAMNDDINTPVAVATLFELAGEVNRTCDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 TGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|73666934|ref|YP_302950.1| cysteinyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|109894899|sp|Q3YSF3|SYC_EHRCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72394075|gb|AAZ68352.1| cysteinyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 459

 Score =  535 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 208/476 (43%), Positives = 270/476 (56%), Gaps = 41/476 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL      F  ++  NI++YVCGPTVY+F HIGNAR ++++DVL+RLL+  Y    V
Sbjct: 3   IYNTLTGIKEPFIPLNVDNIKVYVCGPTVYNFVHIGNARSIVIYDVLFRLLKLLY--PSV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII  A+    +I        +TS   + F +D   L CL PT++P+AT
Sbjct: 61  TYVRNITDIDDKIINVAQSNGQNI------CEVTSVYIKAFHEDMKMLNCLEPTYEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           ++I  MI LIQ +I HGHAY  N  + F+  S P+YG  S+R I E   G+RV  +  KK
Sbjct: 115 DNINVMINLIQKLIDHGHAYVDNATVFFNVESYPSYGQLSKRNIKELIYGSRVDIELGKK 174

Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS  YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEVDNKLMSCWPSPWGLGRPGWHIECSAMSYCYLSENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA      A  WIHNGFL + G KMSKS GN +T+ +LLE+   G    
Sbjct: 235 PHHENEIAQSCCAFPGSYYAKYWIHNGFLTVNGEKMSKSLGNVLTVRQLLESGVKG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
              +IR  +L THYR+P+D+    L  A+  L++     +S            +   V+ 
Sbjct: 291 --ELIRYVLLNTHYRKPLDWFNMTLVSAQESLNRMYTALSSVNVDLSLDDDVELSSDVVD 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEV---CKEHLNKN 404
            L +D+NT  AI  LH++  E  K  D      L      +A+ LGI             
Sbjct: 349 CLKDDINTPKAISVLHEMVTEINKTSDVMKKTSLAKTLIKTANFLGILQHSWQDWFRVNE 408

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               I+KL+ ER I      F  AD IR+ L SKG +L D K+       T W +K
Sbjct: 409 NDQEIDKLIDERRIARANNDFKKADDIRQLLLSKGIVLSDNKDGT-----THWYKK 459


>gi|6599476|gb|AAF18750.1|AF163997_1 cysteinyl-tRNA synthetase [Methanococcus maripaludis]
          Length = 476

 Score =  535 bits (1380), Expect = e-150,   Method: Composition-based stats.
 Identities = 165/480 (34%), Positives = 237/480 (49%), Gaps = 54/480 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL RK  EF+ ++ + ++MYVCGP VYD  H+G+ R  +  D++ R L +     
Sbjct: 2   LKVYNTLTRKEEEFKTLNKNEVKMYVCGPPVYDTTHLGHGRTYVSLDIIRRYLEHIGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII+RA               I+ +  + F+ D   L        P+
Sbjct: 60  TVNLVINFTDIDDKIIKRA------YEKGKDPKEISEQFIKVFLDDMATLKVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I  I+ +I  G AY+  + + F+     NYG  S   +++   G RV     
Sbjct: 114 VTEHISEIIAFIERLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARVETSEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN  DF LWK + P EP WESP+G+GRPGWHIECSAMSS YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNQKDFALWKTAKPGEPKWESPFGKGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N WIH GF+ + G KMSKS GNFITI ++        + +  
Sbjct: 234 HENEIAQSSAYSG-KDWVNYWIHTGFVMVNGEKMSKSLGNFITIGDI-------SKEYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
            ++R   +  HYR PID+T + +   +  L K      +                     
Sbjct: 286 EILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRIWGENEFLL 345

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNAS 388
                       +A+ +D NTV A++++ +++    K   L            L  +   
Sbjct: 346 YDILKNSKNNFYNAMNSDFNTVEALKSVFEVSNGVNKYLSLTETPSEGLLLKALDFYKII 405

Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             I G+     KE    N    ++ L++ R  L   K +  +D IR  L++ G+ +ED  
Sbjct: 406 GEIFGLFENYFKESSESNEEEFVKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIEDNP 465


>gi|199598530|ref|ZP_03211947.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199590572|gb|EDY98661.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 468

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 176/492 (35%), Positives = 254/492 (51%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A          +A   +  +    F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIITAA------HKTGEAPLDLAQRFIDAFMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           A+  IP +I  +Q++I  G+AY  + ++ +      +YG  S + +DE + G        
Sbjct: 114 ASQMIPDIIDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      ++    W+HNGF+ +  + +KMSKS GNFIT++++L+T    
Sbjct: 234 EFPHHENEIAQSEAKTG-KQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDILKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------Q 339
                  V+R  M  T YR PI ++   L  A   L++                     Q
Sbjct: 290 ----DPQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAVAGVDAQ 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
            +     +    ++A+ +D+N  + +  L  LA+   +            +DLL  ++A 
Sbjct: 346 ITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+         N+   I+ LV+ R      K F+ +D IR QL ++G ILED    
Sbjct: 406 LQIFGVVFTDP---TNLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 460 ---PQGTRWRRK 468


>gi|256849116|ref|ZP_05554549.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256713892|gb|EEU28880.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 477

 Score =  535 bits (1379), Expect = e-150,   Method: Composition-based stats.
 Identities = 168/495 (33%), Positives = 253/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E GW+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIGWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             R     V+R  M    YR  I+++ + L +A  +L ++  T T+              
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTVTNINYRLAYDTASEES 347

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFN 386
                     +     A+ +D N  +A+ A++ L             +  +         
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLA 407

Query: 387 ASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   + G++  K       +    I+ LV++R      K ++++D IR QL+  G  ++D
Sbjct: 408 SWLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQD 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 468 T------PQGTRWTR 476


>gi|306845278|ref|ZP_07477854.1| cysteinyl-tRNA synthetase [Brucella sp. BO1]
 gi|306274437|gb|EFM56244.1| cysteinyl-tRNA synthetase [Brucella sp. BO1]
          Length = 506

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 224/502 (44%), Positives = 295/502 (58%), Gaps = 52/502 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT Q
Sbjct: 66  AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGT 177
           PRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G 
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L       
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                     FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305

Query: 281 SNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI ++L         W    +         RL+ML THYREPI++T QRL E+ 
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWSDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365

Query: 332 ILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K+ D+  +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHAGAVAAALCDDLNSWAAITAL----RQAFKSRDVAAL 421

Query: 385 FNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               A ++G+         +V         + AI   + ERL  +  K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLFDPYFVTASDVPIFAKADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480

Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
             +G  L+D K+P  G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502


>gi|56696997|ref|YP_167359.1| cysteinyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|61216118|sp|Q5LRJ6|SYC_SILPO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56678734|gb|AAV95400.1| cysteinyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 465

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 212/455 (46%), Positives = 269/455 (59%), Gaps = 24/455 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R   EF  IDP N+RMYVCGPTVYD AH+GN RP++VFDVLYRLLR+ YG  
Sbjct: 4   IKLHNTRTRTKEEFVPIDPDNVRMYVCGPTVYDRAHLGNGRPVVVFDVLYRLLRHVYGAD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +    I        IT++ TQ F+ D   L  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAERGRPIG------DITAETTQWFLDDMGALGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+ ++  GHAYEA   ++F   S    YG  S R +D+   G RV    
Sbjct: 118 ATQYIPQMVAMIEELVAKGHAYEAEGHVLFAVDSWKEHYGKLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK STP  PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMSYELLGESFDIHGGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      AN W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 238 HHENEIAQSCCAHPEGHFANFWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----PAVLSALYNDL 359
             VIR   L THYR+P+D+T ++  EAE  L KW + +     ++    P  + AL +DL
Sbjct: 292 GEVIRFVFLSTHYRKPMDWTEKKAKEAEATLRKWWRLTAPLDEMEIKPSPQFIDALTDDL 351

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHI-----LGIEVCKEHLNKNISIAIEKLVQ 414
           NT  AI  LH+LA+E  K++  L        +      G+       +  +  A   L +
Sbjct: 352 NTPGAIAELHRLAKE--KDYAALEAGLEMLGLQETVNFGVASFGFSTSVEVLEAANDLAR 409

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             +     K F  AD ++K     G  L   K   
Sbjct: 410 RWMAYRDAKNFEEADRLKKSALLAGVDLSVSKEGG 444


>gi|300088786|ref|YP_003759308.1| cysteinyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528519|gb|ADJ26987.1| cysteinyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 482

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 166/497 (33%), Positives = 237/497 (47%), Gaps = 62/497 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI NTL      F+      + MYVCG T    AHIG+A   I FDV+ R L Y     
Sbjct: 1   MKISNTLTGTREVFKPA-ADPVSMYVCGITPQSSAHIGHAMSYINFDVIRRYLLYRGY-- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKII +A       P       +  +N   F  D + L  L     PR
Sbjct: 58  RVKYVQNFTDVDDKIIAKAA------PAGLTPLELADRNIADFQADMSALNILPADAYPR 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  IP +I L++ ++  G AYE    + F    + +YG  S R +++ + G R+     
Sbjct: 112 VTEEIPAIIELVEGLVARGFAYEVRGSVYFRVRRLADYGKLSHRTLEQMQAGARIEVDET 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK + P EP W SPWG+GRPGWHIECSAMS  YLG+  DIHGGG DLIFPH
Sbjct: 172 KEDPMDFVLWKATKPGEPAWASPWGQGRPGWHIECSAMSHKYLGETIDIHGGGADLIFPH 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     W+HNG L L G KMSKS GN ITI E L       + + A
Sbjct: 232 HENEIAQSESFTGQKPFVRYWLHNGLLQLGGEKMSKSLGNLITIKEAL-------QKYSA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------V 351
             +R+ +L +HYR P+ ++ + +  AE    +  Q +  K +   A              
Sbjct: 285 DALRVFVLSSHYRSPLTYSDEIVEAAEKGARRLTQAAGDKTVTSEADDPLFDREVCRSRF 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKE----- 399
           + A+ +D NT  A+ AL  LAR+  +          +  +    A +LG+ +        
Sbjct: 345 VEAMDDDFNTPRALAALFDLARDINRLEAEGRPTGKVRALLRELAGVLGLRLESADKTAG 404

Query: 400 ---------------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                                  + +   A+  ++  R  L + K ++ AD +R +L+  
Sbjct: 405 DHSGLLVAAAEIWRADGRELPDWDGDAERAMADILSLRAELRREKNYAEADKLRNRLDET 464

Query: 439 GFILEDYKNPDNGQRMT 455
           G +++D          T
Sbjct: 465 GIVIKDTPTGPVWSYKT 481


>gi|227879317|ref|ZP_03997183.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|262047597|ref|ZP_06020552.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|227861086|gb|EEJ68739.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|260572173|gb|EEX28738.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 477

 Score =  535 bits (1378), Expect = e-150,   Method: Composition-based stats.
 Identities = 168/495 (33%), Positives = 253/495 (51%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E GW+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIGWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             R     V+R  M    YR  I+++ + L +A  +L ++  T T+              
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTVTNINYRLADDTASEES 347

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFN 386
                     +     A+ +D N  +A+ A++ L             +  +         
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLA 407

Query: 387 ASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   + G++  K       +    I+ LV++R      K ++++D IR QL+  G  ++D
Sbjct: 408 SWLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQD 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 468 T------PQGTRWTR 476


>gi|227513730|ref|ZP_03943779.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227522453|ref|ZP_03952502.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227083049|gb|EEI18361.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227090405|gb|EEI25717.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 468

 Score =  534 bits (1377), Expect = e-150,   Method: Composition-based stats.
 Identities = 178/492 (36%), Positives = 257/492 (52%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  +F+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 2   LQIFNTLTRKKEKFEPVTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+ H ++        I  K    F++DT  L        PR
Sbjct: 61  -VNYVSNFTDVDDKMINAARENHTTVG------AIAEKYINAFMQDTAALNISKDVTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-- 182
           AT +IP++I  ++N+   G+AY  +  + F     P YG      +D+ ++G     +  
Sbjct: 114 ATQNIPEIIAFVKNLEDQGYAYNVDGNVYFRARKFPTYGELPHINVDQLEVGASQHVEKG 173

Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK+S   E  W+SPWG+GRPGWHIECS MS  YLGK  DIHGGG DL
Sbjct: 174 EFEQKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSMKYLGKTLDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           IFPHHENE AQS      +     W+HNGF+ +  +  KMSKS GNFIT+++LL      
Sbjct: 234 IFPHHENERAQSEAETH-QTFVKYWMHNGFVTIGEDNEKMSKSLGNFITVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIRL M  THYR PI ++   + EA+  L K                    P+
Sbjct: 287 -KKIDGQVIRLLMSTTHYRRPIQYSDASVQEAKSNLKKLQTAFNNSTYRLHNAEAGSDPK 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
           T      I    + A+ +D N  + I A+++LA+ S    +           ++      
Sbjct: 346 TEQEVRQIVADFIDAMDDDFNVQNGIAAVYELAKFSNMYSERNVVFQNSLQFIINTLKQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A I GI++ +  L  +    I  L+ ER      K F  +D IR++L+++G +LED    
Sbjct: 406 AAIFGIKLEQSELKDD---EIWALIHERQQARANKDFIRSDEIREELKARGIVLEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TR++++
Sbjct: 460 ---PQGTRFRKE 468


>gi|149914707|ref|ZP_01903237.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter sp.
           AzwK-3b]
 gi|149811500|gb|EDM71335.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter sp.
           AzwK-3b]
          Length = 462

 Score =  534 bits (1377), Expect = e-150,   Method: Composition-based stats.
 Identities = 211/457 (46%), Positives = 274/457 (59%), Gaps = 20/457 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNT  R     + ++P N+RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG
Sbjct: 1   MTIRLYNTKARAKQVLEPLNPDNVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHVYG 60

Query: 63  EKCVTYVRNITDIDDKIIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
              VTYVRN TD+DDKI  RA         +N  I+ IT++ T  F+ D   L  L P  
Sbjct: 61  PDHVTYVRNFTDVDDKINARAIENVGKGGDVNAEIARITAQTTHWFLDDMGALGALEPDA 120

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT +IPQMI +I+++I  GHAYEA   ++F   S  +YG  S R +D+   G+RV  
Sbjct: 121 MPRATQYIPQMIAMIEDLIGRGHAYEAEGHVLFAVDSYADYGRLSGRSVDDMIAGSRVEV 180

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+
Sbjct: 181 APYKRNPMDFVLWKPSSADLPGWDSPWGRGRPGWHIECSAMSHELLGESFDIHGGGNDLM 240

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+++LLE        
Sbjct: 241 FPHHENEIAQSCCAHPGSGFARIWMHNEMLQVEGKKMSKSLGNFFTVHDLLE------EG 294

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-QTSTSKGIIDP--AVLSALYND 358
            P  VIR   L THYR+P+D+T ++  EA+  L KW  Q    +G  +P  AV+ A+ +D
Sbjct: 295 VPGEVIRFVFLSTHYRKPMDWTAEKAREAQATLRKWYRQAEQGEGNAEPYVAVVEAVSDD 354

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-----CKEHLNKNISIAIEKLV 413
           LNT  AI  LH+L        D      A+   LG+              ++S    +L 
Sbjct: 355 LNTPKAITELHRL-----SQADDRSTLRATLRFLGLMADGVPDWAARPVADLSALETRLA 409

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           Q R   ++ K FS  D ++  L + G  +   K+   
Sbjct: 410 QARAAAMQSKDFSEVDRLKAALVAVGVEVRMSKDGVE 446


>gi|49474075|ref|YP_032117.1| cysteinyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|61216196|sp|Q6G073|SYC_BARQU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49239579|emb|CAF25936.1| Cysteinyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 502

 Score =  534 bits (1377), Expect = e-150,   Method: Composition-based stats.
 Identities = 226/505 (44%), Positives = 308/505 (60%), Gaps = 53/505 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++ YNTL RK   F  ID + +R+YVCGPT+YD+AHIGNAR +IVFDVL+RLLRY YG
Sbjct: 2   RKLRFYNTLTRKKENFTPIDATKVRLYVCGPTIYDYAHIGNARSVIVFDVLFRLLRYVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V YVRNITD+DDKI  RA  EHP + +NDAI  +T +   QF +DT  L CL PT Q
Sbjct: 62  NEHVIYVRNITDVDDKINARAACEHPELALNDAIRQLTERTYSQFQQDTMALGCLLPTSQ 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS---IPNYGSFSRRKIDEQKMGTRV 179
           PRAT+H+  M  LI+ ++  GHAY+  N ++F   S    P+YG+F++R +DE + G RV
Sbjct: 122 PRATDHLEDMRSLIERLLEKGHAYKVQNHVLFSVRSIRNHPHYGAFAKRSLDEMRAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL--------- 227
               +K+   DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L         
Sbjct: 182 DVAAYKREEMDFVLWKPSAVGEPGWASPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGLT 241

Query: 228 -----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                  VFDIHGGG+DLIFPHHENEIAQSC A   E+ AN+W+HNGFL +EG+KMSKS 
Sbjct: 242 CDDPTANVFDIHGGGIDLIFPHHENEIAQSCSAFGTERMANLWMHNGFLQVEGKKMSKSL 301

Query: 283 GNFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           GNFITI  +LE+  F           ++W     R +ML THYREP+++T QRL ++   
Sbjct: 302 GNFITIRSILESDFFEFNGVLTDEMKQNWAGLSARFSMLQTHYREPLNWTAQRLVQSSSE 361

Query: 334 LSKWPQTS-------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
           L +W +              +D +V+ AL +DLNT  A+  L K  +        + + N
Sbjct: 362 LYRWYELLCFEREEMEKNEALDDSVIDALSDDLNTPKALTLLRKFYKAGN----AIALAN 417

Query: 387 ASAHILGIEVCKEHLNKNI-----------SIAIEKLVQERLILLKMKKFSSADYIRKQL 435
              ++ G+ + +E + +             S  I++ + ERL L+  K++++AD IR +L
Sbjct: 418 GM-NLFGL-LRQEWVQEVECPLFMRKISLNSKFIDQRIAERLRLIHNKEWAAADTIRDEL 475

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
            +KG IL+D K+P  G+R T W+ +
Sbjct: 476 AAKGVILKDGKDPQTGERTTMWEMR 500


>gi|227510715|ref|ZP_03940764.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227189836|gb|EEI69903.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 468

 Score =  534 bits (1377), Expect = e-150,   Method: Composition-based stats.
 Identities = 176/492 (35%), Positives = 257/492 (52%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  +F+ + P  + MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 2   LQIFNTLTRKKEKFEPVTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR+ H ++        I  K    F++DT  L        PR
Sbjct: 61  -VNYVSNFTDVDDKMINAARENHTTVG------AIAEKYINAFMQDTAALNISKDVTHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-- 182
           AT +IP++I  ++N+   G+AY  +  + F     P YG      +D+ ++G     +  
Sbjct: 114 ATQNIPEIIAFVKNLEDQGYAYNVDGNVYFRARKFPTYGELPHINVDQLEVGASQHVEKG 173

Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK+S   E  W+SPWG+GRPGWHIECS MS  YLGK  DIHGGG DL
Sbjct: 174 EFEQKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSMKYLGKTLDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           IFPHHENE AQS      +     W+HNGF+ +  +  KMSKS GNFIT+++LL      
Sbjct: 234 IFPHHENERAQSEAETH-QTFVKYWMHNGFVTIGEDNEKMSKSLGNFITVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            +     VIRL M  THYR PI ++   + EA+  L K                    P+
Sbjct: 287 -KKIDGQVIRLLMSTTHYRRPIQYSDASVQEAKSNLKKLQTAFNNSTYRLHNAEAGSDPK 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
           T      I    + A+ +D N  + I A+++LA+ +    +           ++      
Sbjct: 346 TEQEVRQIVADFIDAMDDDFNVQNGIAAVYELAKFANMYSERDVVFQNSLQFIINTLKQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A + GI++ +  L  +    I  L+ ER      K F  +D IR++L+++G +LED    
Sbjct: 406 AAVFGIKLEQSELKDD---EIWALIHERQQARANKDFIRSDEIREELKARGIVLEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TR++++
Sbjct: 460 ---PQGTRFRKE 468


>gi|227501071|ref|ZP_03931120.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227216844|gb|EEI82242.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 471

 Score =  534 bits (1377), Expect = e-149,   Method: Composition-based stats.
 Identities = 172/486 (35%), Positives = 253/486 (52%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  ID + I+MYVCGPTVYD+ HIGNARP++VFD L R + +   + 
Sbjct: 1   MKIHNTLTRQKEEFIPIDENKIKMYVCGPTVYDYMHIGNARPLVVFDTLRRYMNFRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V YV N TD+DDKII ++  E        +   +T K    +++D   L      T  P
Sbjct: 60  -VKYVVNFTDVDDKIINKSIAE------GISTKEVTDKYIAAYMEDAKDLNIDEENTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
           RAT  +  +I  ++ +I  G AYE+  ++ FD S   +YG  S + I++   G       
Sbjct: 113 RATEVMDDIIAFVKGLIDKGMAYESEGDVYFDVSKADDYGKLSGKNIEDLIHGASNRLDR 172

Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +   KK+P DF LWK++    E  W+SPWG GRPGWHIECS MS   LG   DIH GG 
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWKSPWGDGRPGWHIECSTMSKKILGDTIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS   +  +K AN W+HNG + ++G KMSKS GNF T++++       
Sbjct: 233 DLEFPHHENEIAQSEGLNG-KKFANYWMHNGMIQVDGSKMSKSLGNFFTLHDI------- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------- 341
            + +   VIR  +L T+YR+PI+FT + + +A   L +                      
Sbjct: 285 KKEYDLSVIRFWLLTTNYRQPINFTKEIINQANSSLQRLTNAYFRLEDLKKSQAEKSQTI 344

Query: 342 -----TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------ESTKNHDLL----PIFN 386
                          +  + +DLNT  AI  L  +A+      +   + DL+     ++ 
Sbjct: 345 NQDLIRELDSFKNKFIEVMDDDLNTADAITVLFDIAKFINTKIDENSDKDLVNKTFDLYK 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +    LG+   K+  N ++   IE+L+ +R    K K F++AD IR +L   G  ++D +
Sbjct: 405 SLFDTLGLLAKKKEDNVDV-AKIEELIAKRSEAKKAKDFATADAIRDELSHMGITIKDTR 463

Query: 447 NPDNGQ 452
                +
Sbjct: 464 EGVKWE 469


>gi|323700147|ref|ZP_08112059.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 485

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 179/499 (35%), Positives = 245/499 (49%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL+R+  EF     +++ MYVCG T YD  HIG+AR  +VFDVLYR L++   + 
Sbjct: 1   MRLYNTLKRRKEEFTPAHNNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLKHEGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN TDIDDKII+RA +      +    S I  K   +F  D  RL    P+ +P+
Sbjct: 60  -VNFIRNFTDIDDKIIKRANE------VGKEASEIAEKFIGEFYVDMDRLNIERPSVEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+MI L Q +I  GHAY   + ++ F   S   YG  S R IDE + G R+    
Sbjct: 113 CTEHIPEMIALTQRLIDKGHAYATPSGDVYFKVRSFEGYGKLSGRNIDELESGARIAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWH+ECSAMS  Y     DIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPFWESPWGKGRPGWHLECSAMSEKYADLPLDIHGGGQDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A   +  AN W+HNGF+ +   KMSKS GNF TI ++L         + 
Sbjct: 233 HHENEVAQSEAATG-KPFANYWVHNGFVQINSEKMSKSLGNFFTIRDILA-------KFL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------QTS 341
              +R  +L  HYR P+DF+   L EAE  L +                        +  
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFDALEEAEKGLKRIYSALNQIDEELARDKWKKSPFPEELV 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNA-- 387
                ++     A+ +DLNT  A+  +    R + +              DL     A  
Sbjct: 345 KELDDLEKHFAEAMADDLNTAGALGHVFSAIRLAGRVAEDKNLRKSEGGRDLFARIKADM 404

Query: 388 --SAHILGI------EVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
              A +LGI      E   E  +            + +L+  R    K K F+ +D IR 
Sbjct: 405 ADWASVLGIFERKPAEFLLELRDSRAARAGIDPAKVRELLDARAQARKDKDFARSDAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L +    + D        
Sbjct: 465 ELAAMQVEVHDTPQGATWD 483


>gi|282163962|ref|YP_003356347.1| cysteinyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156276|dbj|BAI61364.1| cysteinyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 471

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 164/484 (33%), Positives = 249/484 (51%), Gaps = 49/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL  K+ +F  +    ++MYVCGPTVYD+ H+G+AR  +VFD + R L+Y   + 
Sbjct: 3   LRFYNTLASKVEDFVPLHDMEVKMYVCGPTVYDYCHMGHARAYVVFDTIRRYLQYKGYK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKI++RA ++      N     +  K    + +D  RL  L   + PR
Sbjct: 62  -VTYVQNFTDVDDKILKRAAEQ------NVPPKELAEKFINAYFEDMDRLNILRADYYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
            + ++P +I +I+ ++  G+AY ++  + F   S+    G+ S +  D  K+G RV    
Sbjct: 115 VSQNLPAIIDMIKALVDKGYAYVSDGSVYFSVDSMSEKVGALSHQSYDALKVGARVEVDE 174

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            K+NP DF LWK S P E   WESPWG GRPGWHIECSAMS   LG   DIHGGGLDL+F
Sbjct: 175 RKRNPMDFALWKASKPGEIISWESPWGPGRPGWHIECSAMSMTTLGPNIDIHGGGLDLVF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE+EI Q+         A  WIHNGFL +   KMSKS GNF  + ++L       + +
Sbjct: 235 PHHESEIMQTEAYTGKPPFAKYWIHNGFLLVNKEKMSKSLGNFFLVRDVL-------KKF 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------S 341
               +R  +L THY+ P+DF  Q L +A   L +                          
Sbjct: 288 SPDTVRFFILNTHYQSPLDFNDQALEDASRGLERIKNAISGIEARIRSPLAGAASIPGVP 347

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAH 390
                        + ++L+T  A+  + +L R+  +             ++L ++   + 
Sbjct: 348 ERLSESKKRFEERMDDNLDTREALAEIFELTRDVNRWLAEGDMPADQWKEVLDLYGIYSD 407

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI+      +   S  ++ +V  R  + K K + ++D IRK+L+  G  +ED K    
Sbjct: 408 VLGIKWTGSMEDLFASELLQLIVDIRDAVRKKKDYETSDLIRKRLKELGITIEDSKEGTK 467

Query: 451 GQRM 454
            +R+
Sbjct: 468 IKRI 471


>gi|186684074|ref|YP_001867270.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186466526|gb|ACC82327.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 524

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 171/521 (32%), Positives = 244/521 (46%), Gaps = 85/521 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F+ ++   ++MY CG TVYD+ H+G+AR  IV+DV+ R L++   
Sbjct: 24  MTLTLYNTLTRRQEPFETVEAGKVKMYYCGVTVYDYCHLGHARACIVWDVVRRYLQFIGY 83

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y++N TDIDDKI+ RA  EH       ++  + ++  + + +D  RL        
Sbjct: 84  E--VRYIQNFTDIDDKILNRACVEH------SSMEAVANRFIKAYFEDMARLGIREADEY 135

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
           PRAT+ +  +  LI  +   G AY A+ ++ +       YG  S RK+++ + G      
Sbjct: 136 PRATHTMNGIQRLIHELEKKGFAYPADGDVYYAVRQFAEYGKLSGRKLEDMQAGKSERVN 195

Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE   KK+P DF LWK + P E  WESPWG GRPGWHIECSAM    LG   DIH G
Sbjct: 196 VEDPEYQKKKDPFDFALWKAAKPGETAWESPWGAGRPGWHIECSAMVRDRLGDTIDIHAG 255

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNFITI ELL+   
Sbjct: 256 GADLIFPHHENEIAQSEAVTG-KPLARYWLHNGMVKVDGEKMSKSLGNFITIRELLD--- 311

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------- 342
              R      +RL +L   YR PIDFT + +  A        +                 
Sbjct: 312 ---RGVNPMAVRLFVLTAQYRTPIDFTDEAIAAATNGWHTIKEGLLFGYQYGEKLGWDLG 368

Query: 343 -----------------------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                                     +        + ND N    +  L +LA+E  +  
Sbjct: 369 TGDLGLGTEEEFSQSPIPNPQYPVPNLYVERFQEIVNNDFNFPGGLTVLFELAKELRREG 428

Query: 380 DLL-----------------PIFNASAHILGIEVCKE----HLNKNISIAIEKLVQERLI 418
            +L                       A +LG+E   E     +N      IE  +Q+R  
Sbjct: 429 HILVHEGKTETSPDKLKHQWQTLVTLAGVLGLEAEIEAETDKINGLSDAEIEAKIQQRQE 488

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + K F+ +D IR +L+++G  L D ++       TRW +
Sbjct: 489 ARQGKNFAESDRIRDELQAEGITLIDSRD------GTRWHR 523


>gi|259500940|ref|ZP_05743842.1| cysteine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302190608|ref|ZP_07266862.1| cysteinyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|259167634|gb|EEW52129.1| cysteine-tRNA ligase [Lactobacillus iners DSM 13335]
          Length = 470

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 179/490 (36%), Positives = 259/490 (52%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------T 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLKQAEAVLKRYKNILRNIKERLSEKNDVSDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L                  HD + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLHDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|58617054|ref|YP_196253.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311364|sp|Q5FHI9|SYC_EHRRG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58416666|emb|CAI27779.1| Cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 457

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 201/473 (42%), Positives = 275/473 (58%), Gaps = 39/473 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL R    F  +D +N+++YVCGPTVYDFAHIGN+R ++++D+L+RLL   Y    V
Sbjct: 3   IYNTLTRSKELFVPLDVNNVKIYVCGPTVYDFAHIGNSRSIVIYDILFRLLNVLY--PKV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY+RNITDIDDKII  A+        N  I  +T++  + F +D  RL CL PT++PRAT
Sbjct: 61  TYIRNITDIDDKIINVAQNN------NQNIYDVTARYIKAFNEDMGRLNCLKPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I  M+ LI+ +I +GHAY  +N + FD  S P YG  S R I E   G+R+  +  KK
Sbjct: 115 ENIDVMLALIEKLINYGHAYIRDNTVFFDIQSYPAYGKLSGRNIMELIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS +YLG+ FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATDIDSKLMSCWPSPWGVGRPGWHIECSAMSYNYLGENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQSCCA      A  WIHNGFL +   KMSKS GNF+T+ +LL++   G    
Sbjct: 235 PHHENELAQSCCAFPNSYYAKYWIHNGFLTVNHEKMSKSLGNFLTVRQLLDSGIRG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDPAVLSA 354
              VIR   L THYR+P+D+    ++ A+  L++          +       +   ++S 
Sbjct: 291 --EVIRYIFLSTHYRKPLDWNDNVVSSAQESLNRIYMALNVTDERLLLDDVEVSDEIISC 348

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIE--VCKEHLNKNIS 406
           L +D+NT  AI  LH++     K  D+      + +   SA+ LGI     +E    +  
Sbjct: 349 LKDDMNTPKAIAVLHEMVTRINKASDIDKKVYFIKVLIKSANFLGILHHSWQEWFKVDND 408

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             I +L+ ER +      F  AD IR+ L  KG +L D K+       T W +
Sbjct: 409 QDIIQLIHERKMAKTNGDFIKADRIRQILLDKGIVLSDNKDGT-----TLWYR 456


>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
 gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
 gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
          Length = 569

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 189/508 (37%), Positives = 264/508 (51%), Gaps = 74/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++ +YNT  R+   FQ   P   + MYVCG T YD +HIG+AR  + FDVLYR LRY  
Sbjct: 70  RELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL- 128

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+ 
Sbjct: 129 -DHKVRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMANLHCLPPSV 181

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI Q+I +I+ II +  AY    ++ F   + P YG  S RK+D+ + G RV  
Sbjct: 182 EPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAV 241

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DLI
Sbjct: 242 DERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 301

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A       N WIHNGF+N+  +KMSKS GNF+TI ++ E        
Sbjct: 302 FPHHENEIAQSRAACCDSS-INYWIHNGFVNVNSQKMSKSLGNFVTIRKVTEL------- 353

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
           +    +R+ +L THYR PI++T+++L  A   L    QT                     
Sbjct: 354 YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPV 413

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNAS- 388
                   +     +++ +DL+T  A+ A+ +  +            K    L   +A  
Sbjct: 414 NTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSAME 473

Query: 389 ------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADY 430
                   +LG+      E  ++   K +         + + ++ER    K K++  +D 
Sbjct: 474 EKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDE 533

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IRK+L + G  L D      G   T W+
Sbjct: 534 IRKELAAVGIALMD------GPDGTTWR 555


>gi|330996564|ref|ZP_08320446.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
 gi|329573120|gb|EGG54739.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
          Length = 494

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 163/494 (32%), Positives = 243/494 (49%), Gaps = 45/494 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ IYNTL RK  EF+ I P  + MYVCGPTVY  AH+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFIYNTLSRKKEEFKPITPGRVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLQHI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +    T +F      L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEELEPMEVAQYYTNRFHAAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I L++ I+ +G+AY +   + FD        +YG  S R +++ 
Sbjct: 119 LPPSIEPHATGHIIEQIELVKEILDNGYAYVSEGSVYFDVEKYNKTHHYGKLSGRNLEDV 178

Query: 174 KMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              +R  +    K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG  F
Sbjct: 179 INNSRALDGVGEKHNQVDFALWKCAQPQHIMRWPSPWSNGFPGWHCECTAMGRKYLGDHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A +     N W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGSDMVNYWMHNNMITINGQKMGKSLGNFITLAQF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
                +   +++    IR  +L  HYR  +DF+ + L  +E  LS+  +   +   I P 
Sbjct: 298 FSGEHESLTQAYSPMTIRFFILQAHYRSTVDFSNEALQASEKGLSRLMEGVANLKRITPT 357

Query: 350 ---------------AVLSALYNDLNTVSAIQALHKLA--------RESTKNHDLLPIFN 386
                              A+ +DLN+   I  L            R++T + D+L    
Sbjct: 358 AGGSVGMAYVDELRRKCYEAMDDDLNSPIVISHLFDACRVINTVVDRKATMSADVLAALA 417

Query: 387 ASAHILGIEV--CKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
              H    ++   KE         +     ++ L+++R+I    K ++++D IR  L + 
Sbjct: 418 EVFHTFAFDILGLKEETGGGSGREEAFGKVVDMLLEQRMIAKANKDWATSDKIRDNLAAL 477

Query: 439 GFILEDYKNPDNGQ 452
           GF ++D K+    +
Sbjct: 478 GFEVKDTKDGFTWK 491


>gi|254688949|ref|ZP_05152203.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260754439|ref|ZP_05866787.1| cysteine-tRNA ligase [Brucella abortus bv. 6 str. 870]
 gi|260674547|gb|EEX61368.1| cysteine-tRNA ligase [Brucella abortus bv. 6 str. 870]
          Length = 506

 Score =  534 bits (1376), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/503 (44%), Positives = 293/503 (58%), Gaps = 52/503 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5   TPQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT 
Sbjct: 65  GAQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTV 124

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMG 176
           QPRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G
Sbjct: 125 QPRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAG 184

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------ 227
            RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L      
Sbjct: 185 ARVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGG 244

Query: 228 --------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
                      FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMS
Sbjct: 245 GLKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMS 304

Query: 280 KSNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           KS GNFITI ++L                  W     RL+ML THYREPI++T QRL E+
Sbjct: 305 KSLGNFITIRDVLNDGLPQLGEWGDNTVRDHWAGLAARLSMLQTHYREPINWTAQRLAES 364

Query: 331 EILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
              L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  
Sbjct: 365 ADELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAA 420

Query: 384 IFNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
           +    A ++G+         +V         + AI   + ERL  +  K ++ AD IR +
Sbjct: 421 LGEGMA-LMGLLDPYFVTVSDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDE 479

Query: 435 LESKGFILEDYKNPDNGQRMTRW 457
           L  +G  L+D K+P  G+R+T W
Sbjct: 480 LLQEGVQLKDSKDPATGERITTW 502


>gi|255021318|ref|ZP_05293366.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969181|gb|EET26695.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 471

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 185/481 (38%), Positives = 253/481 (52%), Gaps = 47/481 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I I++++E +      + P  + +YVCG TVYDF H+G+AR M+ FD + R LR    
Sbjct: 6   PPIHIHDSMEGRKLPLSLVQPGKVGIYVCGMTVYDFCHLGHARVMVTFDTVVRYLRARGL 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRNITDIDDKII RA +        + +  +T +      +D   L C+APT +
Sbjct: 66  E--VTYVRNITDIDDKIIRRAAER------GEGLDSLTQRFIDAMHEDEVALGCIAPTVE 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+ QM+ LI+ ++  GHAY   N ++ +   S P YG  S R ++E   G RV  
Sbjct: 118 PRATQHVGQMLELIETLVRRGHAYAPGNGDVYYAVRSFPAYGRLSGRSLEELHSGARVEP 177

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG  FDIHGGG DL+
Sbjct: 178 GEDKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSQETLGCRFDIHGGGADLL 237

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNGF+ ++  KMSKS GNF  + +LL         
Sbjct: 238 FPHHENEIAQSQGAGCA--FAQHWMHNGFVRIDEEKMSKSLGNFRLVRDLLPI------- 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAV 351
           +   V+R  +L +HYR P++F+ + L +A   L++           D          P  
Sbjct: 289 YGGEVLRFFILNSHYRSPLNFSEKLLEQARSGLTRLYTALRELPDDDGSILPEDSWGPRF 348

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGI------EVCK 398
            SA+ +D +T  A+  L  LARE  +  D       L         +LGI      +  +
Sbjct: 349 HSAMADDFHTPEALAVLFDLAREINRRRDAGEPFAALARRLRELGAVLGILQRRPEDFLR 408

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     IE  +  R    + + F+ AD +RK+LE  G +LED      G   T W+
Sbjct: 409 GDAAGIDVDWIEGRIAARAAARRERNFAEADRLRKELEECGILLED------GPGGTTWR 462

Query: 459 Q 459
           Q
Sbjct: 463 Q 463


>gi|326802927|ref|YP_004320745.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651090|gb|AEA01273.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 471

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 155/493 (31%), Positives = 243/493 (49%), Gaps = 63/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL +   EF  I+   + MYVCGPTVY++ HIGNAR ++ FDV+ R L Y   E 
Sbjct: 2   LTVYNTLTKAKEEFHPINAGKVNMYVCGPTVYNYIHIGNARSIVAFDVIRRYLEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII+R+++E            +  K    + +D  +L     T  PR
Sbjct: 61  -VNFVSNFTDVDDKIIKRSQEE------GITSRQVADKYIAAYYEDIDKLNVKRATLNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
              +I  +I  +Q+++   +AY  + ++ +   S  +YG  S + ID+ + G        
Sbjct: 114 VLENIDAIIEFVQDLVDKDYAYVVDGDVYYRARSFSSYGKLSDQSIDDLRSGASERVSAD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K++  DF LWK +   EP W+SPWG GRPGWHIECS MS+ YL    DIHGGG DL
Sbjct: 174 EQGKKEDSVDFALWKAAKAGEPSWDSPWGAGRPGWHIECSVMSTRYLADTLDIHGGGADL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           +FPHHENE AQS      +   N W+HNGF+ +  +G KMSKS GNF+  ++LL      
Sbjct: 234 VFPHHENERAQSEARTG-KTFVNYWLHNGFVTMGDDGEKMSKSLGNFVLAHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
            +     ++R  +   HYR P+ F+   L EA+  L +                      
Sbjct: 287 -KEVDPTIVRFFLASAHYRAPLKFSHSNLEEAQRNLERLQTAHDNINYRLQDAKESLADD 345

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
                    +D   +  + +D N  +A+  +++  +      +   +            +
Sbjct: 346 EKQLGELQALDEHFIQVMDDDFNVPNALTVIYEALKRINIYMEAPQVSQAVLKAYDQQLS 405

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               I+GIE  +  +   +   ++ L++ER      K +  +D IR++L  +G IL+D  
Sbjct: 406 QWLAIIGIEFQEASI---LDSEVQALIEERDQARLDKNYDRSDAIRQELLDQGIILDDT- 461

Query: 447 NPDNGQRMTRWKQ 459
                 + TRW++
Sbjct: 462 -----PQGTRWRR 469


>gi|62289637|ref|YP_221430.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699565|ref|YP_414139.1| cysteinyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189023890|ref|YP_001934658.1| cysteinyl-tRNA synthetase [Brucella abortus S19]
 gi|237815131|ref|ZP_04594129.1| cysteinyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254693431|ref|ZP_05155259.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|254697084|ref|ZP_05158912.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254729980|ref|ZP_05188558.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256257197|ref|ZP_05462733.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260545608|ref|ZP_05821349.1| cysteinyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260757658|ref|ZP_05870006.1| cysteine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260761485|ref|ZP_05873828.1| cysteine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260883467|ref|ZP_05895081.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261213685|ref|ZP_05927966.1| cysteine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|297248048|ref|ZP_06931766.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|81309440|sp|Q57E65|SYC_BRUAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109894886|sp|Q2YN22|SYC_BRUA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558619|sp|B2S4T7|SYC_BRUA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|62195769|gb|AAX74069.1| CysS, cysteinyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615666|emb|CAJ10653.1| Cysteinyl-tRNA synthetase, class Ia [Brucella melitensis biovar
           Abortus 2308]
 gi|189019462|gb|ACD72184.1| Cysteinyl-tRNA synthetase, class Ia [Brucella abortus S19]
 gi|237789968|gb|EEP64178.1| cysteinyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260097015|gb|EEW80890.1| cysteinyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260667976|gb|EEX54916.1| cysteine-tRNA ligase [Brucella abortus bv. 4 str. 292]
 gi|260671917|gb|EEX58738.1| cysteine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260872995|gb|EEX80064.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260915292|gb|EEX82153.1| cysteine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
 gi|297175217|gb|EFH34564.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 506

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/503 (44%), Positives = 293/503 (58%), Gaps = 52/503 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5   TPQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT 
Sbjct: 65  GAQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTV 124

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMG 176
           QPRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G
Sbjct: 125 QPRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAG 184

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------ 227
            RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L      
Sbjct: 185 ARVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGG 244

Query: 228 --------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
                      FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMS
Sbjct: 245 GLKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMS 304

Query: 280 KSNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           KS GNFITI ++L                  W     RL+ML THYREPI++T QRL E+
Sbjct: 305 KSLGNFITIRDVLNDGLPQLGEWGDNTVRDHWAGLAARLSMLQTHYREPINWTAQRLAES 364

Query: 331 EILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
              L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  
Sbjct: 365 ADELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAA 420

Query: 384 IFNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQ 434
           +    A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +
Sbjct: 421 LGEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDE 479

Query: 435 LESKGFILEDYKNPDNGQRMTRW 457
           L  +G  L+D K+P  G+R+T W
Sbjct: 480 LLQEGVQLKDSKDPATGERITTW 502


>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
          Length = 569

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 189/508 (37%), Positives = 264/508 (51%), Gaps = 74/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +++ +YNT  R+   FQ   P   + MYVCG T YD +HIG+AR  + FDVLYR LRY  
Sbjct: 70  RELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL- 128

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRN TDIDDKII RA Q      + +    ++ + +  F+ D   L CL P+ 
Sbjct: 129 -DHKVRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMANLHCLPPSV 181

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR ++HI Q+I +I+ II +  AY    ++ F   + P YG  S RK+D+ + G RV  
Sbjct: 182 EPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAV 241

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  FDIHGGG DLI
Sbjct: 242 DERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 301

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A       N WIHNGF+N+  +KMSKS GNF+TI ++ E        
Sbjct: 302 FPHHENEIAQSRAACCDSS-INYWIHNGFVNVNSQKMSKSLGNFVTIRKVTEL------- 353

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
           +    +R+ +L THYR PI++T+++L  A   L    QT                     
Sbjct: 354 YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQHQSKAGDPLPV 413

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNAS- 388
                   +     +++ +DL+T  A+ A+ +  +            K    L   +A  
Sbjct: 414 NTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLSAME 473

Query: 389 ------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADY 430
                   +LG+      E  ++   K +         + + ++ER    K K++  +D 
Sbjct: 474 EKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEKSDE 533

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IRK+L + G  L D      G   T W+
Sbjct: 534 IRKELAAVGIALMD------GPDGTTWR 555


>gi|154253106|ref|YP_001413930.1| cysteinyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|187629837|sp|A7HWJ0|SYC_PARL1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154157056|gb|ABS64273.1| cysteinyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 468

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 192/480 (40%), Positives = 265/480 (55%), Gaps = 44/480 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K K+ +YNTL R+   F+  +P  + MYVCGPTVY+ +HIGNARP +VFDVL        
Sbjct: 7   KLKLSLYNTLTRQKEIFEPAEPDRVTMYVCGPTVYNRSHIGNARPAVVFDVLA--RLLRR 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
             + V Y RNITDI+DKII  A++          IS+IT K  + + +D   L  LAP  
Sbjct: 65  LYRHVVYARNITDIEDKIIAAAKE------AGVDISVITEKYARIYREDMGALGVLAPDI 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +P+AT  I +MI +++ +I  G+AY A   ++F+  S   YG  S R  D+   G RV  
Sbjct: 119 EPKATESIAEMISMMERLIASGNAYAAEGHVLFNVPSFAEYGRLSGRDRDDMIAGARVEV 178

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +KK+PADF+LWK STP +PGW+SPWGRGRPGWHIECSAM   +LG+  DIHGGG+DL 
Sbjct: 179 APYKKDPADFVLWKPSTPEQPGWDSPWGRGRPGWHIECSAMIEKHLGETIDIHGGGIDLQ 238

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS CA      A  W+HNGF+N+   KMSKS GN + ++ELL         
Sbjct: 239 FPHHENELAQSSCAHGHTPLARFWLHNGFVNMGSEKMSKSLGNVLLVHELLA-------Q 291

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVL 352
            P   +RLA+L  HYR+P+D++ + L +A+ +L +      +   +           A +
Sbjct: 292 APGEAVRLALLNAHYRQPLDWSDEGLAQAKRMLDRLYGALRALSDVKAEPTNDAAPDAFM 351

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILG-IEVCKEHLNKNI 405
            AL +DLNT  A+  L  LA+ +    D      L      +  +LG +E+  E      
Sbjct: 352 EALADDLNTPKALAVLFDLAKRANTETDPGTKAQLKAALIGAGRLLGVLEMDPEAWFAGA 411

Query: 406 SI-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                     +E+L+  R    K K F+ AD IR  L   G  +ED      G + T W+
Sbjct: 412 GAASHIDGEEVERLIAARNAARKAKDFAEADRIRGALAEMGVAIED------GPQGTSWR 465


>gi|42569504|ref|NP_565717.2| SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA
           ligase/ nucleotide binding [Arabidopsis thaliana]
 gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 563

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 186/508 (36%), Positives = 267/508 (52%), Gaps = 74/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K++ ++NT+ RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   
Sbjct: 63  KELWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGY 122

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V+YVRN TD+DDKII RA++      + +    ++ +  ++F +D  +L CL P+ Q
Sbjct: 123 E--VSYVRNFTDVDDKIIARAKE------LEEDPISLSRRFCEEFNRDMEQLQCLDPSVQ 174

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR ++HIPQ+I LI+ I+ +G+AY+ + +I F     P YG  S RK+++ + G RV   
Sbjct: 175 PRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVD 234

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+PADF LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  FDIHGGG+DL+F
Sbjct: 235 TRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVF 294

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSC A      +  WIHNGF+ ++  KMSKS GNF TI ++++        +
Sbjct: 295 PHHENEIAQSCAACDSSNIS-YWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL-------Y 346

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------------- 339
               +RL ++ THYR PI+++   L  A   +    Q                       
Sbjct: 347 HPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPS 406

Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQA-------LHKLA------RESTKNHDLLPI- 384
            T TS        ++++ +DL T   + A       ++ L       +++ +   L  + 
Sbjct: 407 DTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALE 466

Query: 385 --FNASAHILG---------IEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADY 430
                   ILG         +E  KE   K        + + VQER    K K++  +D 
Sbjct: 467 TTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDA 526

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IRK L   G  L D          T W+
Sbjct: 527 IRKDLAKVGIALMDS------PEGTTWR 548


>gi|189461692|ref|ZP_03010477.1| hypothetical protein BACCOP_02356 [Bacteroides coprocola DSM 17136]
 gi|189431579|gb|EDV00564.1| hypothetical protein BACCOP_02356 [Bacteroides coprocola DSM 17136]
          Length = 492

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 165/492 (33%), Positives = 244/492 (49%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLTRRKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIQLVEGILKNGYAYESQGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 INTTRELDGQQEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRKYLGENF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A +       W+HN  + + G+KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGHDMVRYWMHNNMITINGQKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++ A  IR  +L  HYR  +DF+ + L  AE  L +  +   +   I P+
Sbjct: 298 FTGSNKLLTQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLERMMEGVKNLERITPS 357

Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--------- 387
                            A+ +DLNT   I  L    R      D     +A         
Sbjct: 358 KTTSGIEPAGLREKCYEAMNDDLNTPIVISHLFDAIRMINTVIDKKATISADDLEELKSV 417

Query: 388 ----SAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                  ILG++   E+     +     ++ L+++R+     K ++++D IR  L + GF
Sbjct: 418 FHTFVFDILGLKAEAENNAAREEAFGKVVDMLLEQRMQAKANKDWATSDKIRDTLAALGF 477

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 478 EVKDTKDGFTWK 489


>gi|91204303|emb|CAJ71956.1| strongly similar to cysteinyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 492

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 175/514 (34%), Positives = 258/514 (50%), Gaps = 78/514 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K YN++ +K   F+ +   ++ MYVCGPTVYD  HIG+A+  + +DV+ R LRY   
Sbjct: 1   MTLKFYNSITKKKEVFKPLVEGHVNMYVCGPTVYDHPHIGHAKSYVSYDVIVRYLRYLGY 60

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           + C  YV+NITD+          DDKI+ RA++E          +++    T+ + +D  
Sbjct: 61  KVC--YVQNITDVGHLTDNADAGDDKILARAQRERIE------PAVLVEIYTRSYFEDMD 112

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
            L  L P   PRAT HIP+ I LI+ +I  G+AY +N  + F+ S    YG  S RK ++
Sbjct: 113 ALNNLRPDISPRATAHIPEQIELIEKLISKGYAYVSNGSVYFEVSKYREYGKLSGRKQED 172

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            + G R+     K+NP DF LWK++ P     W+SPWG G PGWH+ECSAMS  YLG+  
Sbjct: 173 LEAGARIEINLEKRNPNDFALWKKAEPAHIMRWKSPWGEGFPGWHLECSAMSMKYLGESL 232

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG++ +FPHHE EIAQS  A+ +      WIHN  + + G+KM KS GNF+T+ + 
Sbjct: 233 DIHGGGIENMFPHHECEIAQSEAANDM-TFVRYWIHNNMVTVNGQKMGKSLGNFVTLKDA 291

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
                   + +    IR  +L THYR P+DF+ + L  A+  L +   T           
Sbjct: 292 F-------KKYHPLTIRFFILSTHYRSPLDFSNEALDAADKGLKRLFNTIKRVRRQIDEA 344

Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------H 379
                             A L+A+  D+NT  AI AL  L++E                 
Sbjct: 345 ANGETTVLVYEKLEEHKKAFLNAMDEDINTSGAIAALFDLSKEVNALLDSGEEVSKKCME 404

Query: 380 DLLPIFNASAH-ILGIEVCKEHLNKNIS------------IAIEKLVQERLILLKMKKFS 426
           D+  ++      ILGI   ++ +  +I               +  L+  R  L K K F 
Sbjct: 405 DINSLYQELGDGILGIVPVRKEVKADIEDDFSEGDKSVLKEVMGVLIDTRNQLRKEKLFQ 464

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +D+IR +L   G  LED ++      +T WK++
Sbjct: 465 LSDFIRNKLTEIGITLEDTQD------VTLWKKR 492


>gi|49475313|ref|YP_033354.1| cysteinyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|61216197|sp|Q6G5G9|SYC_BARHE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|49238119|emb|CAF27326.1| Cysteinyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 503

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 221/505 (43%), Positives = 304/505 (60%), Gaps = 52/505 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++ YNTL RK   F  ID + +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ YG
Sbjct: 2   RELRFYNTLTRKKENFIPIDATRVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y RNITD+DDKI  RA  E+P + +NDAI  +T     QF +DT  L CL PT +
Sbjct: 62  NEHVIYARNITDVDDKINARAAYEYPELALNDAIRQLTQLTYTQFQQDTMALGCLPPTIE 121

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS---IPNYGSFSRRKIDEQKMGTRV 179
           PRAT+H+ +M  LI+ ++  GHAY+A N ++F  SS    P+YGSF++R +DE + G RV
Sbjct: 122 PRATDHLEEMRSLIERLLEKGHAYKAENHVLFSVSSIRNDPHYGSFAKRSLDEMRAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL--------- 227
               +K+   DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L         
Sbjct: 182 DVASYKREEMDFVLWKPSAEGEPGWTSPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGLT 241

Query: 228 -----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                  VFDIHGGGLDLIFPHHENEIAQSC A   E+ AN+W+HNGFL +EG+KMSKS 
Sbjct: 242 CDDPTENVFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANLWMHNGFLQVEGKKMSKSL 301

Query: 283 GNFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
            NFITI  +LE+  F           ++W     R +ML THYREP+++T QRL ++   
Sbjct: 302 SNFITIRSILESDFFEFNGVLTNEMKQNWAGLSARFSMLQTHYREPLNWTAQRLMQSSSE 361

Query: 334 LSKWPQT--------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
           L +W +              +ID ++++AL +DLNT  A+  L K  +            
Sbjct: 362 LYRWYELLRCEKTEMEKKNEVIDDSLINALSDDLNTPKALTLLRKFYKRGN-----AVSL 416

Query: 386 NASAHILGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            +  +  G+   +   +                I++ + ERL L+  K++++AD IR +L
Sbjct: 417 ASGMNFFGLLRQEWVRDGKCPLFMRKTSLDEKFIDQRIAERLRLIHNKEWTAADTIRDKL 476

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
            ++G +L+D K+P  G+R T W+ K
Sbjct: 477 AAEGIVLKDIKDPQTGERTTMWEIK 501


>gi|256254697|ref|ZP_05460233.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261221878|ref|ZP_05936159.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
 gi|260920462|gb|EEX87115.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
          Length = 506

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/502 (44%), Positives = 294/502 (58%), Gaps = 52/502 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT Q
Sbjct: 66  AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGT 177
           PRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G 
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L       
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                     FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305

Query: 281 SNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI ++L         W    +         RL+ML THYREPI++T QRL E+ 
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365

Query: 332 ILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  +
Sbjct: 366 DELHRWYGLLRDEGFGTPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421

Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
               A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480

Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
             +G  L+D K+P  G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502


>gi|67458460|ref|YP_246084.1| cysteinyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75537070|sp|Q4UND9|SYC_RICFE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|67003993|gb|AAY60919.1| Cysteinyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 459

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 194/477 (40%), Positives = 276/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D + ++MYVCGPTVYD  HIGN+R ++V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQTKVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GE+ V YVRNITD+DDKII+RA        ++  I+ +T K TQ+F  +   L CL P+
Sbjct: 61  FGEQSVKYVRNITDVDDKIIDRAEL------LSITINELTDKVTQEFHTNMAYLGCLLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G R+ 
Sbjct: 115 IEPKATEHIDVMIEIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVRIE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KK+P DF+LWK + P E     ++SPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKHPQDFVLWKPAKPNESANMNFKSPWGFGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+  L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPDSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRNLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +       +    + 
Sbjct: 291 --KEISGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHNFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  K  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEEKQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    I +L+ +RL   K K +  AD IR QL  +  ILED  +       T W+++
Sbjct: 408 VDELYINELLNKRLEAKKQKNWLLADQIRNQLLEEKIILEDKPDGT-----TIWRKE 459


>gi|17987555|ref|NP_540189.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|225852198|ref|YP_002732431.1| cysteinyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256044370|ref|ZP_05447274.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|256113213|ref|ZP_05454081.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264294|ref|ZP_05466826.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|260563723|ref|ZP_05834209.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265990788|ref|ZP_06103345.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|265994624|ref|ZP_06107181.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|38258395|sp|Q8YG89|SYC_BRUME RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765182|sp|C0RI19|SYC_BRUMB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|17983259|gb|AAL52453.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|225640563|gb|ACO00477.1| cysteinyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|260153739|gb|EEW88831.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|262765737|gb|EEZ11526.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263001572|gb|EEZ14147.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|263094565|gb|EEZ18363.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326408697|gb|ADZ65762.1| cysteinyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538421|gb|ADZ86636.1| cysteinyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 506

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/503 (44%), Positives = 294/503 (58%), Gaps = 52/503 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5   TPQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT 
Sbjct: 65  GAQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTV 124

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMG 176
           QPRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G
Sbjct: 125 QPRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAG 184

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------ 227
            RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L      
Sbjct: 185 ARVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGG 244

Query: 228 --------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
                      FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMS
Sbjct: 245 GLKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMS 304

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPIDFTVQRLTEA 330
           KS GNFITI ++L         W    +         RL+ML THYREPI++T QRL E+
Sbjct: 305 KSLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAES 364

Query: 331 EILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
              L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  
Sbjct: 365 ADELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAA 420

Query: 384 IFNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQ 434
           +    A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +
Sbjct: 421 LGEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDE 479

Query: 435 LESKGFILEDYKNPDNGQRMTRW 457
           L  +G  L+D K+P  G+R+T W
Sbjct: 480 LLQEGVQLKDSKDPATGERITTW 502


>gi|309806486|ref|ZP_07700490.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167085|gb|EFO69260.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 470

 Score =  534 bits (1375), Expect = e-149,   Method: Composition-based stats.
 Identities = 178/490 (36%), Positives = 258/490 (52%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------T 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRNIQERLSEKNDVSDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L                   D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|241764153|ref|ZP_04762188.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241366490|gb|EER60990.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 459

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 247/478 (51%), Gaps = 44/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + +F  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+    
Sbjct: 1   MSLRIYNTLSRALEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +     I  +T +      +D   L    P  +
Sbjct: 61  --RVTYVRNITDIDDKIIRRA------LERGITIRQLTDEMIAAMHQDIGALGIEPPAVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ LI  +   G AY A N ++ +       YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLSLIGQLEGKGLAYRATNGDVNYSVRKFAGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 173 QDGKEDPLDFVLWKSAKPEEPPEAKWDSPFGTGRPGWHIECSAMSCATLGETFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLAKFWVHNGFVRVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPA--- 350
            + + A  +R  ++  HYR  ++++   L +A   L +          +    ID A   
Sbjct: 286 -QQYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVAPSEVASIDWADPY 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKNI 405
                +A+  D  T  AI  L  LA E  K     L  +  A A  LG+           
Sbjct: 345 AARFKAAMDEDFGTPEAIAVLFDLASEVNKTRSPQLAGLLKALAGCLGLLQGDPQAFLQA 404

Query: 406 SIAIEKLVQERLILLKM-----KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               ++   +  I  +      K F+ AD IR  L ++G +L+D          T W+
Sbjct: 405 GAGFDEAAIQAQIAARAAAKAGKDFAEADRIRNALLAQGIVLKDSAA------GTTWE 456


>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 485

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 179/499 (35%), Positives = 252/499 (50%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R   +F  ++P  +RMYVCG T YD+ HIG+AR  +VFDVL R LRY     
Sbjct: 1   MLIYNTLHRAKEKFVPLEPGKVRMYVCGITAYDYCHIGHARSCVVFDVLVRYLRYLGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V++VRN TD+DDKII+RA +E            +  K  + F  D   L  L    +PR
Sbjct: 59  HVSFVRNFTDVDDKIIKRAEEEGL------DSDQVAEKYIEAFYLDMDELNVLKADVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +MI + ++++  G AY  +  +I F    +P YG  S R I+E + G+R+    
Sbjct: 113 ATRHIEEMIQVTKSLLDKGFAYITSGKDIYFRVRRMPRYGQLSGRNIEELQSGSRIAPDE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH+EC+AMS  YLG  FDIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKTAKPGEPSWDSPWGAGRPGWHLECTAMSEKYLGIPFDIHGGGQDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS  A   E     W+HNGF+ ++  KMSKS GNFITI +++       + + 
Sbjct: 233 HHENEKAQSEAAFDRE-FVKYWVHNGFVRVDSEKMSKSLGNFITIRDIM-------KDFH 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------WPQTS 341
             V+R  +L  HYR P+D++   L E E  L +                      +P+ S
Sbjct: 285 GEVLRFFLLTKHYRSPLDYSDGSLEETEKALKRVYWAKTGLQKELQKEKWSKGQGFPEAS 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                +      A+ +DLNT  A+  +  L R + +  +                +L + 
Sbjct: 345 QELQDLASKWDQAMQDDLNTAEAVGYVFGLVRLANRMLEDKTFRKSEAGKEIIQQMLGML 404

Query: 386 NASAHILGI-----EVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                 LG+     E   E L              ++++V +R    K K F +AD IR+
Sbjct: 405 EGWGDALGVFQRSGEEFLEQLKLMRCNRLDIDPQTVQEMVLKRQQARKDKDFETADNIRE 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L +KG  + D        
Sbjct: 465 ELTAKGIEVMDTPEGPRWD 483


>gi|319407042|emb|CBI80679.1| Cysteinyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 502

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 225/503 (44%), Positives = 308/503 (61%), Gaps = 51/503 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++ YNTL R+  +F  ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3   ELRFYNTLTRRKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRNITD+DDKI  +A  ++P + +NDAI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYVRNITDVDDKINAKAALQYPDLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++ +LI+ ++  GHAY A+N I+F   S+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRFLIERLLEKGHAYIADNHILFSVGSMGDNPRYGMFAKRSLDEMRAGARID 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL---------- 227
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L          
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWISPAGISVLGRPGWHIECSAMSMAKLLSPYGGGFIC 242

Query: 228 ----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG+DLIFPHHENEIAQSC     E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NFITI  LLE   F           R W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFITIRSLLENDFFEFADILSAEVKRIWAGLSIRFSMLQTHYREPLNWTMQRLVQSSSEL 362

Query: 335 SKWPQTSTSK-------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
            +W +   S+         +D +++  L NDLNT + I  L K  +E    H+++ + + 
Sbjct: 363 YRWYELLRSERCCLDDNQTVDSSLIKTLSNDLNTSNTITILRKFYKE----HNIIALAHG 418

Query: 388 SAHILGIEVCKEHLNKNIS----------IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               LG+   +    K               I++ + ERL L+  K++ +AD IR +L +
Sbjct: 419 M-DFLGLLRQELVKEKECPLFVGKTHLNLQFIDQRIAERLALIHNKEWEAADKIRGELAA 477

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
           +G  L+D K+P  G+R+T W+ K
Sbjct: 478 EGIFLKDSKDPQTGERITTWEMK 500


>gi|229552880|ref|ZP_04441605.1| cysteine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258540510|ref|YP_003175009.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229313749|gb|EEN79722.1| cysteine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257152186|emb|CAR91158.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 468

 Score =  533 bits (1374), Expect = e-149,   Method: Composition-based stats.
 Identities = 175/492 (35%), Positives = 254/492 (51%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A          +A   +  +    F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIITAA------HKTGEAPLDLAQRFIDAFMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           A+  IP ++  +Q++I  G+AY  + ++ +      +YG  S + +DE + G        
Sbjct: 114 ASQMIPDIVDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQE 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  W+SPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      ++    W+HNGF+ +  + +KMSKS GNFIT++++L+T    
Sbjct: 234 EFPHHENEIAQSEAKTG-KQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDILKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------Q 339
                  V+R  M  T YR PI ++   L  A   L++                     Q
Sbjct: 290 ----DPQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAADGVDAQ 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
            +     +    ++A+ +D+N  + +  L  LA+   +            +DLL  ++A 
Sbjct: 346 ITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+         N+   I+ LV+ R      K F+ +D IR QL ++G ILED    
Sbjct: 406 LQIFGVVFTDP---TNLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TRW++K
Sbjct: 460 ---PQGTRWRRK 468


>gi|115352164|ref|YP_774003.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322791|sp|Q0BDV4|SYC_BURCM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115282152|gb|ABI87669.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 465

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 174/484 (35%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F       +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDI+DKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIEDKIIRRA------VENGETIKSLTDRFIGAMHEDEAALGIQRPDLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    W S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPPGATWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D+NT  A+  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDINTPVAVATLFELAGEINRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                     +  IE  +  R+   + K ++ AD IR +L   G  LED          T
Sbjct: 406 TGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|291543500|emb|CBL16609.1| cysteinyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 464

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 164/477 (34%), Positives = 251/477 (52%), Gaps = 48/477 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ RK  E        + +Y CGPTVY+F HIGNARP+  FDVL R L +     
Sbjct: 1   MYLYNTMSRKKEELLPQQGKQVNIYACGPTVYNFIHIGNARPICAFDVLRRYLTWRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKII+RA +E        + + +  K   ++  D   L  +     P+
Sbjct: 59  TVKYVQNFTDVDDKIIKRANEE------GSSAAQVAEKYIAEYKTDAHGLNVMDADVHPQ 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  ++ ++  GHAYEA+ ++ F T+S P YG  S+  +++ + G R+     
Sbjct: 113 VTTCMQDIIDFVKALVDSGHAYEADGDVYFRTASFPEYGKLSKNSMEDLQAGARIGVDER 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP W+SPWG+GRPGWHIECSAMS  YLG   DIH GG DLIFPH
Sbjct: 173 KESALDFAVWKAAKPGEPYWDSPWGKGRPGWHIECSAMSRKYLGDTLDIHCGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +  AN+W+HNG++N++ +KMSKS GNF T  E+ E        +  
Sbjct: 233 HENEIAQSESVTG-KPLANLWMHNGYINVDNKKMSKSLGNFFTAREVAE-------KYGY 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------PQTSTSK 344
            V+R  M+  HYR PI++ V+ L   +  L +                     P +    
Sbjct: 285 EVVRYMMVQAHYRSPINYCVELLDACKASLERLYTCRDTLDRAIANAPAGAADPDSLALF 344

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHILG 393
                A ++A+ +DLNT   +  L  L R+     +              +F+    +LG
Sbjct: 345 DQRKQAFITAMDDDLNTADGVSVLFDLVRDLNTRSNDPATTKDTLTAGARLFDELTGVLG 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +   ++  N+ I   +++LV  R +  K K F+ AD +R ++ + G+ +++ +    
Sbjct: 405 LLYNRKQGNE-IPAQVQELVDARTVARKAKDFAEADRLRDEIAALGYAVKETRQGVE 460


>gi|157803268|ref|YP_001491817.1| cysteinyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|187630858|sp|A8EXE9|SYC_RICCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157784531|gb|ABV73032.1| cysteinyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 459

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 197/476 (41%), Positives = 275/476 (57%), Gaps = 35/476 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F+  D +N++MYVCGPTVYD  HIGN+R   V+D+LYR+L   
Sbjct: 1   MQIQFHLYNTLTRTKELFRPQDQANVKMYVCGPTVYDNPHIGNSRSAAVYDLLYRILIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G   V Y+RNITD+DDKII+RA        +   I+ +T K TQ+F  +   L C  P+
Sbjct: 61  FGSTAVKYIRNITDVDDKIIDRAEL------LGSTINELTDKVTQEFHINMEYLGCKLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+  + F+  S PNY   S R ++E   G RV 
Sbjct: 115 IEPKATEHIDIMIEIIERLIAKKHAYIADKHVYFNVLSAPNYTELSNRNLEEMFEGVRVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KK+P DF+LWK + P E     ++SPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKHPQDFVLWKPAKPNESANMNFDSPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+H+GFL + G KMSKS GNFIT+ +L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHHGFLTVNGEKMSKSLGNFITVRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAVL 352
             +     VIRL +L +HYR P+D+  + + +A+  L  W +   +       II    +
Sbjct: 291 --KEISGEVIRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIVNINLQKIDIIPNDFM 348

Query: 353 SALYNDLNTVSAIQALHKLARES-TKNHDLLPIFNAS-----AHILGI--EVCKEHLNKN 404
            +L +D+NT  A++ ++  AR   T   +    FNAS     A+ +G+  +   E  N  
Sbjct: 349 QSLLDDMNTPLAVKIINDYARGVFTSTTEEEKKFNASNLITCANFIGLMNKTPHEWFNSG 408

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ++   I +LV +RL   K K +  AD IR QL  +  +LED  +       T W++
Sbjct: 409 VNELYINELVNKRLEAKKQKNWLLADQIRNQLLEQQIVLEDKPD------GTIWRK 458


>gi|295692211|ref|YP_003600821.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030317|emb|CBL49796.1| Cysteinyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 477

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 167/495 (33%), Positives = 252/495 (50%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +  K    F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             R     V+R  M    YR  I+++ + L +A  +L ++  T T+              
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTLTNINYRLADDTASEES 347

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFN 386
                     +     A+ +D N  +A+ A++ L             +  +         
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLA 407

Query: 387 ASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   + G++  K       +    I+ LV++R      K ++++D IR QL+  G  ++D
Sbjct: 408 SWLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQD 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 468 T------PQGTRWTR 476


>gi|312874864|ref|ZP_07734883.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|325912411|ref|ZP_08174806.1| cysteine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|311089609|gb|EFQ48034.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|325475753|gb|EGC78924.1| cysteine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 470

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 176/490 (35%), Positives = 259/490 (52%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + I+E + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGRLSGQNIEELEEGASQHVSVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------T 340
             +     V+R  M    YR+PI++T   L +AE +L ++                   +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRNIQERLSEKNDVSDS 344

Query: 341 STSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
             ++ +ID     ++A+ +D N  +A+  +H+L+                  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELSLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    ++KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEMENDD---TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|114765791|ref|ZP_01444886.1| cysteinyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541898|gb|EAU44934.1| cysteinyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 461

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 210/455 (46%), Positives = 272/455 (59%), Gaps = 14/455 (3%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I + N+  RK   F+ IDP N+R+YVCGPTVYD AH+GNARP IVFDVL+RL+R  
Sbjct: 1   MDVPIWLTNSRTRKKELFEPIDPDNVRIYVCGPTVYDRAHLGNARPAIVFDVLFRLMRQV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG + VTYVRN TD+DDKI  RA+          +I  IT++ TQ ++ D   +  + PT
Sbjct: 61  YGPEHVTYVRNFTDVDDKINARAQAS------GRSIGEITAETTQWYLDDMAAVGVMEPT 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H PRAT  I QMI +I ++I  GHAYEA   ++F   S   YG  S R +D+   G RV 
Sbjct: 115 HMPRATEFIDQMIAMIADLIEKGHAYEAEGHVLFAVESYKAYGGLSGRSVDDMIAGARVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K+NP DF+LWK S P  PGWESPWGRGRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 175 VAPYKRNPMDFVLWKPSEPELPGWESPWGRGRPGWHIECSAMSYELLGASFDIHGGGNDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA      A +W+HN  L +EG+KMSKS GNF T+++LLE  + G  
Sbjct: 235 MFPHHENEIAQSCCAHPEGGFAKVWLHNEMLQVEGKKMSKSLGNFFTVHDLLE-GRDGQA 293

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYN 357
             P  VIR  ML THYR+P+D+T ++ ++AE  L KW    T      +    V++AL +
Sbjct: 294 GVPGEVIRFVMLSTHYRKPMDWTAEKASQAEATLKKWYAQITEALDNEVPYVGVVNALAD 353

Query: 358 DLNTVSAIQALHK--LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           DLNT  AI  +H+  LA ++      L +     H  GI       + ++S   +KL   
Sbjct: 354 DLNTAKAIAEMHQLSLAGDTPSLRASLKLLGFLDH--GIPDWARGPDFDLSELADKLAAV 411

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           R   ++ K FS  D ++  L   G  +   K    
Sbjct: 412 RGAAMESKDFSEVDRMKAALLEAGVEVRMSKAGVE 446


>gi|23501564|ref|NP_697691.1| cysteinyl-tRNA synthetase [Brucella suis 1330]
 gi|161618646|ref|YP_001592533.1| cysteinyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225627175|ref|ZP_03785213.1| Cysteinyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701461|ref|ZP_05163289.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254704007|ref|ZP_05165835.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|254709799|ref|ZP_05171610.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254713802|ref|ZP_05175613.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254717140|ref|ZP_05178951.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031289|ref|ZP_05444903.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256060801|ref|ZP_05450963.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|256159399|ref|ZP_05457181.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256369113|ref|YP_003106621.1| cysteinyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260168427|ref|ZP_05755238.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260566743|ref|ZP_05837213.1| cysteinyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|261218954|ref|ZP_05933235.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261317337|ref|ZP_05956534.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321547|ref|ZP_05960744.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261324795|ref|ZP_05963992.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261752004|ref|ZP_05995713.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261754663|ref|ZP_05998372.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261757891|ref|ZP_06001600.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988375|ref|ZP_06100932.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265997841|ref|ZP_06110398.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|294852039|ref|ZP_06792712.1| cysteinyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|38258390|sp|Q8G1N5|SYC_BRUSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189082060|sp|A9MA50|SYC_BRUC2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|23347476|gb|AAN29606.1| cysteinyl-tRNA synthetase [Brucella suis 1330]
 gi|161335457|gb|ABX61762.1| cysteinyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|225618010|gb|EEH15054.1| Cysteinyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|255999273|gb|ACU47672.1| cysteinyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|260156261|gb|EEW91341.1| cysteinyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260924043|gb|EEX90611.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294237|gb|EEX97733.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296560|gb|EEY00057.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261300775|gb|EEY04272.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261737875|gb|EEY25871.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261741757|gb|EEY29683.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261744416|gb|EEY32342.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|262552309|gb|EEZ08299.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264660572|gb|EEZ30833.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|294820628|gb|EFG37627.1| cysteinyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 506

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/502 (44%), Positives = 294/502 (58%), Gaps = 52/502 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT Q
Sbjct: 66  AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGT 177
           PRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G 
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L       
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                     FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305

Query: 281 SNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI ++L         W    +         RL+ML THYREPI++T QRL E+ 
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365

Query: 332 ILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421

Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
               A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480

Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
             +G  L+D K+P  G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502


>gi|312873891|ref|ZP_07733929.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090567|gb|EFQ48973.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 470

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 176/490 (35%), Positives = 254/490 (51%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             +     V+R  M    YR+PI++T   L +AE +L ++     +              
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
                        ++A+ +D N  +A+  +H+L+                  D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELSLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|94310045|ref|YP_583255.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|93353897|gb|ABF07986.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 472

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 194/481 (40%), Positives = 254/481 (52%), Gaps = 45/481 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +YN+L RK    +   P  + MYVCGPTVY+FAHIGNARP +VFDVL RLLR  
Sbjct: 1   MTSALSLYNSLTRKKEPLRTGQPGRVTMYVCGPTVYNFAHIGNARPAVVFDVLARLLREQ 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y E  V Y RN TD+DDKI   A  E   I        IT++    + +D   L  L P 
Sbjct: 61  YAE--VVYARNFTDVDDKINASAAAEGVPIG------TITARYIDAYHEDMRALGVLIPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP +I LIQ +I +G+AY   + ++F   S P YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPAIIALIQRLIANGNAYVEQDHVLFHVPSFPAYGQLSGRRPEDMLAGVRVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW SPWGRGRPGWHIECSAM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTAEVPGWPSPWGRGRPGWHIECSAMIGQHLGSTIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  CA+  E     W+HN F+ ++G+KMSKS GN + + +LL        
Sbjct: 233 IFPHHENEIAQGTCANG-ELYCRTWVHNSFVTVDGQKMSKSLGNVLLLRDLLG------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------TSKGIIDPAVL 352
             P   IRLA+L  HYR P+D+  QRL  A   L ++ +          +     D  V+
Sbjct: 285 QAPGEAIRLALLSAHYRHPLDWNAQRLLTARQTLLRFYRGLKMAEHIEISPGEEPDEEVI 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEH------ 400
           +AL NDLN   A+  LH L  E  K               AS  +LG+     +      
Sbjct: 345 AALNNDLNIPGALARLHVLLAELEKAGADASRSVAKARMMASGRLLGLFQQDPNSALRGL 404

Query: 401 ---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                         +  I+ LV ER    K + F+ AD +R++L + G ++ D  N    
Sbjct: 405 AGAAVTHGIATTADAARIDHLVAEREQARKRRDFARADALREELGAAGVLVHDTPNGSTW 464

Query: 452 Q 452
            
Sbjct: 465 T 465


>gi|325918144|ref|ZP_08180296.1| cysteinyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325535619|gb|EGD07463.1| cysteinyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 476

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 194/496 (39%), Positives = 263/496 (53%), Gaps = 58/496 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS   +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSCPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITHRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  +S   YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFAVASFDGYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGWESPW RGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSTDDLPGWESPWSRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +RLA++  HYR+P+D++   + +A+  L +   T      +D            
Sbjct: 288 --PPEALRLALVSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDVAALDAGDAPDGSASPA 345

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASAHILGIE------- 395
               V +AL +DLNT  A+  +  +A E+    +       I    A +  I+       
Sbjct: 346 IPAEVEAALDDDLNTPQALSIIASIAAEARALRNQVTHGADISARRAELREIKTRLLGAG 405

Query: 396 ------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                             N      I  LV+ER    K K F+ AD IRKQL  +G +LE
Sbjct: 406 LALGLLQQDPAAWFARGTNAGDDARITALVEERSTAKKAKDFARADAIRKQLADEGIVLE 465

Query: 444 DYKNPDNGQRMTRWKQ 459
           D        +  RWK+
Sbjct: 466 DT------PQGVRWKR 475


>gi|307067211|ref|YP_003876177.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|306408748|gb|ADM84175.1| Cysteinyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 440

 Score =  533 bits (1373), Expect = e-149,   Method: Composition-based stats.
 Identities = 168/462 (36%), Positives = 236/462 (51%), Gaps = 39/462 (8%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R + EF  I+   I+MYVCGPTVY++ H+GNAR  + FD + R   Y   +  V Y+ 
Sbjct: 1   MSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYK--VAYIS 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RAR+E            +  K    F +D T L     T  PR    + 
Sbjct: 59  NFTDVDDKIINRAREE------GITPQEVADKYIAAFREDVTALGVKPATRHPRVVEFMA 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPEKYHKKN 187
            +I  ++++I  G AYE+  ++ F      NY   + + +++  +G       E   K+N
Sbjct: 113 DIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEETARKEN 172

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
           P DF LWK S P E  W+SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH N
Sbjct: 173 PVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTN 232

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           EIAQS      +  AN W+HNGF+N++  KMSKS GNFIT+++ L+T           V+
Sbjct: 233 EIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDALKT-------LDGQVL 284

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA--------VLSALYN 357
           R      HYR+PI+FT + + +AE  L     T      G +D           ++A+  
Sbjct: 285 RFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKFVAAMDE 344

Query: 358 DLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
           D N  + I  + ++ +       +  +         I GI   +E L+      IE L+Q
Sbjct: 345 DFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEEVLD----AEIEDLIQ 400

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +R      + F +AD IR QL ++G  L D K+   G R TR
Sbjct: 401 KRQEARANRDFETADQIRDQLAAQGIKLLDTKD---GVRWTR 439


>gi|157825244|ref|YP_001492964.1| cysteinyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|187630857|sp|A8GM31|SYC_RICAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157799202|gb|ABV74456.1| cysteinyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 459

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 192/476 (40%), Positives = 275/476 (57%), Gaps = 33/476 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ +YNTL R    F   D +NI+MYVCGPTVYD  HIGN+R ++V+D+LYR++   
Sbjct: 1   MQIQLHLYNTLSRTKEVFNPQDQANIKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G + V YVRNITD+DDKII+RA        +   I+ +T K TQ+F  +   L C+ P 
Sbjct: 61  FGSRAVKYVRNITDVDDKIIDRAEL------LGITINELTDKVTQEFHTNMAYLGCMLPN 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY  +N + FD  S PNY   S R ++E   G R+ 
Sbjct: 115 IEPKATEHIDVMIEIIERLIAKDHAYITDNHVYFDVLSAPNYTELSNRNLEEMFEGVRIE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +   K +P DF+LWK + P E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 KSKTKNHPQDFVLWKPAKPNESTNMNFESPWGFGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++    
Sbjct: 235 ADLVFPHHTNEIAQSRCAFPDSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +       +    + 
Sbjct: 291 --KDISGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHNFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-----ESTKNHDL-LPIFNASAHILGI--EVCKEHLNKNI 405
           +L +D+NT  A++ ++  A+     ++ K   L   +    A+ +G+  +   E  N  +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFIAKTEKERQLNASVIITCANFIGLMNQTPHEWFNSGV 408

Query: 406 SIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               I +LV +RL   K K +  AD IR QL     ILED  +       T W+++
Sbjct: 409 DSLYINELVNKRLEAKKQKNWLLADQIRNQLLEGKIILEDKSDGT-----TIWRKE 459


>gi|239995443|ref|ZP_04715967.1| cysteinyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 460

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 167/480 (34%), Positives = 255/480 (53%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  R+  +F  +    + +YVCG TVYD +H+G+AR  + FDVL R +R+   + 
Sbjct: 2   LHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        ++   +T++      +D   +  L P  +P 
Sbjct: 61  -VKYVRNITDIDDKIIARANEN------GESFEALTARTIAMMHEDFAAINLLEPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + H+ ++I +IQ ++  G+AY+A + +++FD S   +YG  S++ +D+ K G RV    
Sbjct: 114 VSGHMDEIIAIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVAA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 GKDDPLDFVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA       N+W+H G + +   KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCAYDT-PYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVL-------KEHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVLS 353
           +  +R  ++  HYR  + ++   +T+A+  L +         + +              +
Sbjct: 286 SETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVEVDESTDLSYGGYLKRFEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHL----- 401
           A+ +DLN   A   L  +ARE  +  D       L  +      ILG+            
Sbjct: 346 AMNDDLNVPEAFSVLFDVARELNRQKDNADEAGKLAAVLKGLGAILGMLQSDPDTFLKGG 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N + +  IE L+++R      K +++AD  R  L +KG +LED      G   T W++
Sbjct: 406 EGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAKGVVLED------GPSGTTWRK 459


>gi|229159263|ref|ZP_04287287.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228624155|gb|EEK80957.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 440

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 165/464 (35%), Positives = 238/464 (51%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + + +  I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 57  ----LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWPQT---------------------STSKGIIDPAVLSALYNDLNTVSAIQ 366
                 L +                                  A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAIT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +               +        ILG+E+ +E L   +   IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKIVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439


>gi|256844496|ref|ZP_05549982.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293381071|ref|ZP_06627092.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312977950|ref|ZP_07789696.1| cysteine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256613574|gb|EEU18777.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290922371|gb|EFD99352.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310895257|gb|EFQ44325.1| cysteine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 477

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 166/495 (33%), Positives = 251/495 (50%), Gaps = 62/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ + P +I MYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 4   VRVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD- 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  AR E  ++P       +       F+ DTT L     T  PR
Sbjct: 63  -VKYVSNFTDVDDKMINEARAEKTTVPK------LAENFINAFLADTTALNIEPATLHPR 115

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I  +I  ++++I +G+AYE + ++ +      +YG  S + I++ + G        
Sbjct: 116 ATHEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDT 175

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF LWK    P E  W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 176 EQSRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS      +K  N W+HNGF+ +  +  KMSKS  NF+T++++L     
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             R     V+R  M    YR  I+++ + L +A  +L ++  T T+              
Sbjct: 290 --REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTLTNINYRLEDDTASEES 347

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFN 386
                     +     A+ +D N  +A+ A++ L             +  +         
Sbjct: 348 AELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLA 407

Query: 387 ASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   + G++  K       +    I+ LV++R      K ++++D IR QL+  G  ++D
Sbjct: 408 SWLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQD 467

Query: 445 YKNPDNGQRMTRWKQ 459
                   + TRW +
Sbjct: 468 T------PQGTRWTR 476


>gi|53711487|ref|YP_097479.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
 gi|61216162|sp|Q64ZY1|SYC_BACFR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|52214352|dbj|BAD46945.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
          Length = 491

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 171/491 (34%), Positives = 248/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L   
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +   S   I PA
Sbjct: 298 FSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDSLEKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                           A+ +DLNT   I  L   A+                  DL  +F
Sbjct: 358 ATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLKDLKEVF 417

Query: 386 NAS-AHILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +     ILG++      +         ++ L+++R+     K ++++D IR +L + GF 
Sbjct: 418 HTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGFEWK 488


>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
 gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
          Length = 563

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 173/503 (34%), Positives = 257/503 (51%), Gaps = 68/503 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YNT+ R    F+      + MYVCG T YD +HIG+AR  + FDVLYR L++  
Sbjct: 68  STELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLG 127

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            + C  YVRN TD+DDKII RA +      + +    ++ +  ++F  D   L CL P+ 
Sbjct: 128 YDVC--YVRNFTDVDDKIIARANE------LGEDPISLSRRYCEEFHNDMVYLHCLPPSI 179

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +P  ++H+PQ+I +I+ I+ +G AY  + ++ F     P YG  S RK+++ + G RV  
Sbjct: 180 EPCVSDHMPQIINMIKQILDNGCAYRIDGDVYFSIDGYPEYGKLSGRKLEDNRAGERVAV 239

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNPADF LWK +   EP WESPWG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+
Sbjct: 240 DSRKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLV 299

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSC A R    +  W+HNGF+ +   KMSKS GNF TI ++++        
Sbjct: 300 FPHHENEIAQSCAACRGSNIS-YWVHNGFVTINSEKMSKSLGNFFTIRQVIDL------- 351

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------------- 339
           +    +R  +L THYR P++++  +L  A   +    Q                      
Sbjct: 352 YHPLALRFFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKDSVP 411

Query: 340 --TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNA 387
             T           ++++ +DL+T   + AL    +                 L  I   
Sbjct: 412 SDTLDGINKFSDVFVTSMSDDLHTPVLLAALSDPLKIINDMLHTRKRIQSLAALEKIVRD 471

Query: 388 SAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           +  +LG+      EV ++   K +         + + ++ER +  K + +  +D IRK L
Sbjct: 472 ALSVLGLMPTTYSEVLQQLREKALRRAKLTEEQVLQRIEERTVARKNRDYERSDAIRKDL 531

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
            + G  L D  +       T W+
Sbjct: 532 ATHGIALMDSPD------GTSWR 548


>gi|309809236|ref|ZP_07703106.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871506|ref|ZP_07731599.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312872554|ref|ZP_07732622.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|329920498|ref|ZP_08277230.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|308170470|gb|EFO72493.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311091916|gb|EFQ50292.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311092901|gb|EFQ51252.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|328936174|gb|EGG32627.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 470

 Score =  532 bits (1372), Expect = e-149,   Method: Composition-based stats.
 Identities = 176/490 (35%), Positives = 253/490 (51%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             +     V+R  M    YR+PI++T   L +AE +L ++     +              
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
                        ++A+ +D N  +A+  +H+L                   D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEMENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|299067219|emb|CBJ38416.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
           solanacearum CMR15]
          Length = 465

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 256/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T++      +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGTLTNRFIAAMHEDADALGVQRPDRE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGKLQHNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGAHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A+      N W+HNGF+ +   KMSKS GNF TI ++L      
Sbjct: 234 DLQFPHHENEIAQSEGANG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            + +   V+R  +L +HYR  ++++   L +A   L++             A        
Sbjct: 287 -KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEAQARPDWNEPH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH----- 400
                 A+++D NT  A+  L +LA E  K     L     A   ++G+ V   H     
Sbjct: 346 GKRFREAMHDDFNTPVAMAVLFELATEINKTRSPALASQLAALGGVMGLLVRDPHAFLQG 405

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +   +  +E  ++ R      + F+ AD IR  L + G +LED         +T
Sbjct: 406 GVGAAADGLDTAEVETRIEARRAAKAARDFARADGIRADLLAAGIVLEDKPGG-----VT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|237726044|ref|ZP_04556525.1| cysteinyl-tRNA synthetase [Bacteroides sp. D4]
 gi|229435852|gb|EEO45929.1| cysteinyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
          Length = 493

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 164/493 (33%), Positives = 246/493 (49%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYMNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNFINLSEF 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
            E + K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +       I P 
Sbjct: 298 FEGSHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGLERITPT 357

Query: 350 --------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------- 387
                            +A+ +DLN+   I  L   AR      D     +A        
Sbjct: 358 AQTTGVEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAEDLEELKS 417

Query: 388 -----SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   ILG++      E   +     ++ L+++R+     K ++++D IR +L + G
Sbjct: 418 VFHLFMYEILGLKEETANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRDELAALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEVKDTKDGFTWR 490


>gi|60679757|ref|YP_209901.1| cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
 gi|81317170|sp|Q5LIT7|SYC_BACFN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|60491191|emb|CAH05939.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
          Length = 491

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 171/491 (34%), Positives = 247/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L   
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +   S   I PA
Sbjct: 298 FSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDSLEKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                           A+ +DLNT   I  L   A+                  DL  +F
Sbjct: 358 ATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLKDLKEVF 417

Query: 386 NAS-AHILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +     ILG++      +         ++ L+++R+     K ++++D IR +L + GF 
Sbjct: 418 HTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGFEWK 488


>gi|228912829|ref|ZP_04076476.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228943896|ref|ZP_04106281.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228815729|gb|EEM61965.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228846765|gb|EEM91770.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 440

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 165/464 (35%), Positives = 238/464 (51%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + + +  I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 57  ----LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWPQT---------------------STSKGIIDPAVLSALYNDLNTVSAIQ 366
                 L +                                  A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +               +        ILG+E+ +E L   +   IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKDRNIILEDT------AQGTRWKR 439


>gi|291166310|gb|EFE28356.1| cysteine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 466

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 176/487 (36%), Positives = 254/487 (52%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL R+  EF  I+ + ++MY CGPTVY++ HIGNARP I+FD L   L Y   E 
Sbjct: 1   MRFYNTLTRRKDEFVPIEKNKVKMYSCGPTVYNYFHIGNARPFIIFDTLRNYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TD+DDKII RA +E        +   +  K  +++  D   L     +  PR
Sbjct: 60  -VTFVQNFTDVDDKIINRANEE------GISPLEVADKYIKEYFVDADGLGIRRASVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  I  +I  I+ +I  GHAYE + ++ +DT S   YG  SR+ ++E   G R+     
Sbjct: 113 VTECIEDIIEFIEELIQKGHAYEIDGDVYYDTKSFDGYGKLSRQNMEELNAGARIDVDDR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P+DF LWK+    E GW SPWG GRPGWHIECS MS  YLG   DIH GG DLIFPH
Sbjct: 173 KKSPSDFALWKKKKEGEIGWISPWGEGRPGWHIECSVMSRKYLGDTIDIHSGGQDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      E  A+ W+HNG++N+  +KMSKS  NF T+ E+ E           
Sbjct: 233 HENEIAQSEGRSGKE-FAHYWLHNGYININNQKMSKSLNNFFTVREISEVIDL------- 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA------ 350
            ++R  +L   YR P++F+   L  A+  + +   T          ++G+I         
Sbjct: 285 EIVRFFLLSAQYRNPVNFSQDLLDAAKSGMERLYNTKHKVEFLLEQAQGMIKEDEKEFVS 344

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHIL 392
                    + A+ +DLNT   I A+ +L++                + + IF    ++L
Sbjct: 345 KLPSYRELFIEAMDDDLNTADGISAIFELSKFINTTVSEKSSKEYLQECMNIFCELTNVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            I + K+  +      I +L+++R +  K K F+ AD IR QL   G  + D +      
Sbjct: 405 NI-IQKKKSDGFDEDKINELIEQRSLAKKEKNFAEADRIRGQLHDMGVEVLDTR------ 457

Query: 453 RMTRWKQ 459
           + T WK+
Sbjct: 458 QGTTWKK 464


>gi|228950638|ref|ZP_04112772.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228808989|gb|EEM55474.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 440

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 166/464 (35%), Positives = 239/464 (51%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + + +  I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 57  ----LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWPQT---------------------STSKGIIDPAVLSALYNDLNTVSAIQ 366
                 L +                                  A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +               +        ILG+E+ KE L   +   IE+L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELSKEEL---LDKEIEELIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439


>gi|332881450|ref|ZP_08449099.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332680448|gb|EGJ53396.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 494

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 163/494 (32%), Positives = 246/494 (49%), Gaps = 45/494 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ IYNTL RK  EF+ + P  + MYVCGPTVY  AH+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFIYNTLSRKKEEFKPVTPGRVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLQHI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +    T +F      L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEELEPMEVAQYYTNRFHAAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I L++ I+ +G+AY +   + FD        +YG  S R +++ 
Sbjct: 119 LPPSIEPHATGHIIEQIELVKEILDNGYAYVSEGSVYFDVEKYNKAHHYGKLSGRNLEDV 178

Query: 174 KMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              +R  +    K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG  F
Sbjct: 179 INNSRALDGVGEKHNQVDFALWKCAQPQHIMRWPSPWSNGFPGWHCECTAMGRKYLGDHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A +     N W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGSDMVNYWMHNNMITINGQKMGKSLGNFITLAQF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TST 342
                +   +++    IR  +L  HYR  +DF+ + L  +E  L++  +        T T
Sbjct: 298 FSGEHESLTQAYSPMTIRFFILQAHYRSTVDFSNEALQASEKGLARLMEGIANLKRITPT 357

Query: 343 SKGIIDPA--------VLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFN 386
           + G ++ A           A+ +DLN+   I  L    R        ++T   D+L    
Sbjct: 358 AGGSVEMAYVDELRRKCYEAMNDDLNSPIVISHLFDACRVINTVVDQKATMAGDVLAALT 417

Query: 387 ASAHILGIEV--CKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
              H    ++   KE         +     ++ L+++R+I    K ++++D IR  L + 
Sbjct: 418 EVFHTFAFDILGLKEETGGGSGREEAFGKVVDMLLEQRMIAKANKDWATSDKIRDNLAAL 477

Query: 439 GFILEDYKNPDNGQ 452
           GF ++D K+    +
Sbjct: 478 GFEVKDTKDGFTWK 491


>gi|148560736|ref|YP_001258660.1| cysteinyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|187629796|sp|A5VPL3|SYC_BRUO2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|148371993|gb|ABQ61972.1| cysteinyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 506

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 224/502 (44%), Positives = 293/502 (58%), Gaps = 52/502 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT Q
Sbjct: 66  AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGT 177
           PRAT H+ +M  +I  ++  G AY A + ++      D    P YG+ +RR +DE   G 
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMDARKGPRYGALARRSLDEMLAGA 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L       
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                     FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305

Query: 281 SNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI ++L         W    +         RL+ML THYREPI++T QRL E+ 
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365

Query: 332 ILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421

Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
               A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480

Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
             +G  L+D K+   G+R+T W
Sbjct: 481 LQEGVQLKDSKDSATGERITTW 502


>gi|16331016|ref|NP_441744.1| cysteinyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2500966|sp|P74330|SYC_SYNY3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1653511|dbj|BAA18424.1| cysteinyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 483

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 165/504 (32%), Positives = 241/504 (47%), Gaps = 68/504 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y++L R     Q + P  + MY CG TVYD+ H+G+AR  I +D++ R L++   
Sbjct: 1   MTLRLYDSLTRAKQPLQPLHPGLVTMYCCGITVYDYCHLGHARTCITWDLVRRYLQWSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV+N TDIDDKI++RA  E         +  ++ K    + +D   L        
Sbjct: 61  E--VRYVQNFTDIDDKILKRAVDES------STMEAVSEKFIAAYFEDMEALGVQPADLY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT+ +  +  LI  +   G+AY +  ++ +   +   YG  S R++++ + G      
Sbjct: 113 PRATHTLDGIKRLIAELEAKGYAYPSGGDVYYSVRNFDGYGKLSGRRLEDLQAGASGRVT 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P+   K++P DF LWK + P EP WESPWG+GRPGWHIECSAM   +LG+  D+H G
Sbjct: 173 VADPDGAQKQDPFDFALWKSAKPGEPAWESPWGKGRPGWHIECSAMVREFLGETIDLHVG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS      +  A  W+HNG + ++G KMSKS GNF TI  LL+T  
Sbjct: 233 GNDLIFPHHENEIAQSEAVTG-QPLAQYWLHNGMVKVDGEKMSKSLGNFTTIRALLKTV- 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
                     IRL +L  HYR+P+DFT   +  A        +                 
Sbjct: 291 ------DPMAIRLLVLQGHYRKPLDFTETAIAAATNGWHTLREGLQFGYDYGGDFGWELA 344

Query: 340 ---TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR----ESTK---------NHDLLP 383
                        A   A+ +D N    +  + +LA+    E  K         + DLL 
Sbjct: 345 FTPLGPDANQWTVAFQEAVDDDFNFAGGLAVMFELAKHLRSEGNKLKFEGSTPADLDLLQ 404

Query: 384 ----IFNASAHILGIEVCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                  + A ILG+ +  E  + N        IE+LV +R    K K ++  D +R  L
Sbjct: 405 TQWITLVSLAEILGLSINPESQSSNDNGLTDGDIEQLVAQRTQARKDKNWAEGDRLRDVL 464

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           +  G  L D         +T W +
Sbjct: 465 QEAGITLVDKPGG-----LTEWFR 483


>gi|320530264|ref|ZP_08031333.1| cysteinyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137479|gb|EFW29392.1| cysteinyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 475

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 166/494 (33%), Positives = 244/494 (49%), Gaps = 60/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L       
Sbjct: 2   LTVYNTMTRKKEEFHPLKEGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLARKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +E            I+ +    +      L        PR
Sbjct: 60  RVRYIQNFTDVDDKIINAANRE------GVTWKEISDRYIAAYFTAMDALNVHRADVFPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  +  +I ++  +I  G+AY  +  ++ +      +YG  S R +D+ + G R+    
Sbjct: 114 VSETMEDIIRMVGTLIARGYAYATSEGDVYYSVEKFAHYGRLSGRSLDDMEAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIFP
Sbjct: 174 TKRHPMDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIFP 233

Query: 244 HHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  C D  EK A  W+HNGF+ ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQAEPCIDGHEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KEF 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSA 354
           P  VIR  +L THYR P+DF+ +RL+EA+  L++   T      +          AVL+ 
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLSEAQAALARLSHTKEVIDELSGCEGTADTAAVLAV 346

Query: 355 LYNDL------------NTVSAIQALHKLARESTKNHDLLP---------------IFNA 387
              +             NT  A+  +  L++E  +    L                 +  
Sbjct: 347 QAKEFLAAFDAAMDDDFNTALALSQMFGLSKEINRYRQELERGAAFDAAHFAEAASAYRT 406

Query: 388 SAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            A I+GI   +     +      ++ ++  R      K ++ AD IR +L+  G +LED 
Sbjct: 407 MAEIIGIFEQETAAASDGLADGLMDIIIGLRQDARVQKNWALADRIRNELKEHGVVLEDT 466

Query: 446 KNPDNGQRMTRWKQ 459
                     RWK+
Sbjct: 467 PT------GVRWKR 474


>gi|254718815|ref|ZP_05180626.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265983799|ref|ZP_06096534.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306837536|ref|ZP_07470411.1| cysteinyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662391|gb|EEZ32652.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306407428|gb|EFM63632.1| cysteinyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 506

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 223/502 (44%), Positives = 293/502 (58%), Gaps = 52/502 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D   L  L PT Q
Sbjct: 66  AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVAALGNLQPTVQ 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGT 177
           PRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G 
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L       
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                     FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305

Query: 281 SNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI ++L         W    +         RL+ML THYREPI++T QRL E+ 
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365

Query: 332 ILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHAGAVAAALCDDLNSWAAITAL----RQAFKARDVAAL 421

Query: 385 FNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               A ++G+         +V         + AI   + ERL  +  K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLFDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480

Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
             +G  L+D K+P  G+R+T W
Sbjct: 481 LREGVQLKDSKDPATGERITTW 502


>gi|121593996|ref|YP_985892.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|187629817|sp|A1W6E1|SYC_ACISJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120606076|gb|ABM41816.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 458

 Score =  532 bits (1371), Expect = e-149,   Method: Composition-based stats.
 Identities = 179/477 (37%), Positives = 254/477 (53%), Gaps = 43/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + EF  ++P ++RMYVCG TVYD  H+G+AR MI FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRALEEFSPLEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PTH+
Sbjct: 61  --AVTYVRNITDIDDKIIKRA------VENGETIRSLTDRMIDALHQDADALGIERPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  
Sbjct: 113 PRATAYVPQMLDMIGTLQGKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K +P DF+LWK + P EP    W SP+G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 173 QDGKHDPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A +W+HNGF+N++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA---- 350
            + + A  +R  ++ +HYR P++++   L +A   L +        + +   +D A    
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSNVHLDDARAALKRLYTALSLVAPAPVEVDWAEGYA 344

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKNIS 406
               +A+  D  T  A+  L  LA E  ++       +  A    LG+            
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSPAAAGLLKALGGHLGLLQADPQDFLKAG 404

Query: 407 IAIEK-----LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             +++      +  R      K F+ AD IR  L ++G +L+D  +       T W+
Sbjct: 405 AGLDEAAIQAQIAARATAKAAKNFAEADRIRNDLLAQGIVLKDSAS------GTTWE 455


>gi|190575186|ref|YP_001973031.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|190013108|emb|CAQ46740.1| putative cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 458

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 183/477 (38%), Positives = 262/477 (54%), Gaps = 40/477 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++N L R++  F  +DP+   +YVCGPTVY++ HIGNAR  +VF VL  LLR  +G
Sbjct: 1   MTLRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   AR++   I      S IT +    + +D   L  + P  +
Sbjct: 61  G--LRYARNITDVDDKINTAAREQGVPI------STITDRFAAAYREDMAALGVVPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  T H+PQ+I +I+ +I +GHAY A   ++F  +S   YG  SRR  +E   G RV   
Sbjct: 113 PEVTAHMPQIITMIEQLIANGHAYAAEGHVLFAVASFDGYGKLSRRDPEEMLAGARVDVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A  W+HNG LN  G KMSKS GN   +++L+       R  
Sbjct: 233 PHHENEIAQSECAHGGRIFARYWLHNGMLNFGGAKMSKSLGNIERVHDLV-------RQH 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA-LY 356
           P   +RLA+L  HYR+P+D++   + ++   L +   T      I+     PA + A L 
Sbjct: 286 PPEALRLALLSAHYRQPLDWSDGLIEQSVRTLDRLYGTLRELASIEASAVIPASVEATLD 345

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------------VCKEHLNK 403
           +DLNT  A+  + ++A ++ +  D          +LG                     + 
Sbjct: 346 DDLNTPQALAEVARIAADARRATDPAEQARLKGELLGAGLALGLLQADPAQWFGTAAGDG 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                I+ L+ ER    K + F+ +D IR QL ++G +LED        +  RW +K
Sbjct: 406 GDDARIQGLIDERAAAKKARDFARSDAIRDQLAAEGIVLEDT------PQGVRWSRK 456


>gi|309808476|ref|ZP_07702375.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308168304|gb|EFO70423.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
          Length = 470

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 176/490 (35%), Positives = 253/490 (51%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             +     V+R  M    YR+PI++T   L +AE +L ++     +              
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
                        ++A+ +D N  +A+  +H+L                   D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    I+KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEIENDD---TIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|229003104|ref|ZP_04160954.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228758150|gb|EEM07345.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 440

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 165/464 (35%), Positives = 240/464 (51%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + + +  I  +  + + +D T L C   T  PR T ++  +I  I+ ++  G+AYE
Sbjct: 57  ----LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ + T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWPQT---------------------STSKGIIDPAVLSALYNDLNTVSAIQ 366
                 L +                                  A  +A+ +D NT +A+ 
Sbjct: 285 QNTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMKKFQVAFEAAMDDDFNTANAVT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ LA  + +               +  F     ILG+E+ KE L   +   IE L+Q+
Sbjct: 345 ELYNLANHANQYLLEEHTSKAVLEAYVKQFETLFGILGLELTKEEL---LDEEIEVLIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439


>gi|187479046|ref|YP_787070.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
 gi|109894885|sp|Q2KX38|SYC_BORA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|115423632|emb|CAJ50172.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
          Length = 483

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 171/495 (34%), Positives = 249/495 (50%), Gaps = 54/495 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+ +    +R+YVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 2   LHIYNTLSRTKETFKPVHAGEVRIYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     +  +T         D   LA   P H+PR
Sbjct: 60  AVNYVRNITDIDDKIIRRA------VQTGRRMHEVTDYFIAAMHADERALAVERPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +MI +I  +  +G AY+A+  ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATAYVGEMIDIIGRLEKNGLAYQADDGDVNYAVRGFQGYGKLSGKSLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W+SP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 SKRDPLDFVLWKSAKEEEPPETKWDSPYGFGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK---- 296
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI + +   +    
Sbjct: 234 KFPHHENEIAQTEGAFGG-TLANIWMHCGPLMVDAEKMSKSLGNFRTIRQTIAQGEAQDG 292

Query: 297 ---FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------- 343
              +      A ++R  ++  HYR P ++T   L +A+  L +  Q   +          
Sbjct: 293 EADYQANPREAEMLRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALANVTPDVAGIDW 352

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVC---- 397
                 A  +A+ +D N+  A+ AL +LA +  +  D        A   +LG+       
Sbjct: 353 NEAQAQAFKAAMNDDFNSSGAVAALFELAGQVNRERDSRAAGQLKALGAVLGLLQQDPAV 412

Query: 398 -------------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                        ++  ++  +  IE L+ ER      + F+ AD IR +L + G  L+D
Sbjct: 413 YFQSSTRYSSAGMQQGASQMDAARIEALIAERGQAKLSRDFARADAIRAELRAAGIELDD 472

Query: 445 YKNPDNGQRMTRWKQ 459
                    MT+W++
Sbjct: 473 KPGG-----MTQWRR 482


>gi|253564451|ref|ZP_04841908.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|251948227|gb|EES88509.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
 gi|301161219|emb|CBW20757.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis 638R]
          Length = 491

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 171/491 (34%), Positives = 247/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L   
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTRL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +   S   I PA
Sbjct: 298 FSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDSLEKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                           A+ +DLNT   I  L   A+                  DL  +F
Sbjct: 358 ATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLKDLKEVF 417

Query: 386 NAS-AHILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +     ILG++      +         ++ L+++R+     K ++++D IR +L + GF 
Sbjct: 418 HTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGFEWK 488


>gi|85703328|ref|ZP_01034432.1| cysteinyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85672256|gb|EAQ27113.1| cysteinyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 472

 Score =  532 bits (1370), Expect = e-149,   Method: Composition-based stats.
 Identities = 204/459 (44%), Positives = 279/459 (60%), Gaps = 33/459 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R+   F+ +D  N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4   IKLHNTKTRRKEVFEPLDKDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH--- 121
            VTYVRN TD+DDKI  RA +         +IS IT++ TQ F+ D   L  L P+    
Sbjct: 64  HVTYVRNFTDVDDKINARAAES------GRSISEITAETTQWFLDDMAALGALEPSIRND 117

Query: 122 ------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQK 174
                  PRAT +IPQM+ +I+ +I  GHAYEA   ++F   S   +YG  S R +D+  
Sbjct: 118 PDHQKAMPRATQYIPQMVAMIEGLIAKGHAYEAEGHVLFAVDSWREHYGKLSGRSVDDMI 177

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G RV    +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIH
Sbjct: 178 AGARVEVAPYKRNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAHELLGESFDIH 237

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHENEIAQSCCA    + A  W+HN  L +EG+KMSKS GNF T+ +LLE 
Sbjct: 238 GGGNDLMFPHHENEIAQSCCAHPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE- 296

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---AV 351
                +  P  VIR   L THYR+P+D+T ++  EA+  L KW   +            V
Sbjct: 297 -----QGIPGEVIRFVFLSTHYRKPMDWTAEKAREAKETLWKWQNLTDGAERNRRPYLDV 351

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIA-- 408
           + AL +DLNT  AI  LH+  +E+    D    F+  + +LGI +  ++ + K++  A  
Sbjct: 352 IEALSDDLNTSLAISLLHQKFKEARTQDDANRFFSTLS-LLGIGQNWRDGVRKSVEKAFT 410

Query: 409 ----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
               +++L+++       K + ++D IR  L      ++
Sbjct: 411 TSGLLDRLIEQMEEARAKKDWKTSDQIRDALLEADVRIQ 449


>gi|325913157|ref|ZP_08175527.1| cysteine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|325477578|gb|EGC80720.1| cysteine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 470

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 175/490 (35%), Positives = 253/490 (51%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTQYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             +     V+R  M    YR+PI++T   L +AE +L ++     +              
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
                        ++A+ +D N  +A+  +H+L                   D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    ++KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEMENDD---TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|309804596|ref|ZP_07698661.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|315653979|ref|ZP_07906895.1| cysteine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|308165988|gb|EFO68206.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|315488675|gb|EFU78321.1| cysteine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 470

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 175/490 (35%), Positives = 253/490 (51%), Gaps = 62/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
             +     V+R  M    YR+PI++T   L +AE +L ++     +              
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344

Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
                        ++A+ +D N  +A+  +H+L                   D + + + 
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G+++  E  N +    ++KLV +R +  + K ++++D IR +L +KG ILED   
Sbjct: 405 WLLIFGVKITTEMENDD---TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 460 ----PQGTRW 465


>gi|254881192|ref|ZP_05253902.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
 gi|254833985|gb|EET14294.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
          Length = 493

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 165/493 (33%), Positives = 245/493 (49%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNFINLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +       I PA
Sbjct: 298 FHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGLERITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------- 387
                            +A+ +DLN+   I  L   AR      D     +A        
Sbjct: 358 TQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAEDLEELKS 417

Query: 388 -----SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   ILG++      E   +     ++ L+++R+     K ++++D IR +L + G
Sbjct: 418 MFHLFMYEILGLKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRDELAALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEVKDTKDGFTWK 490


>gi|87301066|ref|ZP_01083907.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87284034|gb|EAQ75987.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 493

 Score =  531 bits (1369), Expect = e-149,   Method: Composition-based stats.
 Identities = 181/513 (35%), Positives = 250/513 (48%), Gaps = 75/513 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL ++   FQ   P  + +Y CG TVYD  H+G+AR  IV+DVL R L +   
Sbjct: 1   MTLRLTNTLTKRTEPFQPRVPGEVSIYCCGVTVYDLCHLGHARSYIVWDVLRRYLIWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+NITDIDDKI+ RA +E        ++ +++ +N   F  D   L  L P   
Sbjct: 61  --RVTFVQNITDIDDKILRRAAEE------GSSMEVVSERNITAFRDDMDSLNILPPDRV 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  +  +  +I  +   G AY A+ ++ F     P+YG  S R + +Q+ G      
Sbjct: 113 PRATRCLDGIRAMIAELEASGAAYSADGDVYFAVMGQPDYGKLSGRSLSDQQDGASGRLN 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 SDEESRKRHPFDFALWKGAKPGEPSFPSPWGPGRPGWHIECSAMVRQELGTTIDIHLGGS 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A+  E  A  W+HNG +N++G KMSKS GNF TI  LL +    
Sbjct: 233 DLIFPHHENEIAQSEAANG-EPLARYWLHNGMVNVDGEKMSKSLGNFTTIRALLAS---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
                A  +RL +L  HYR+P+DF+ + L  A        +          S + G  D 
Sbjct: 288 --GVSAMTLRLFVLQAHYRKPLDFSREALDAAATGWHGLNEALGLGLNTTFSAALGWADV 345

Query: 350 A-------------------VLSALYNDLNTVSAIQALHKLAR----------------- 373
           A                    + AL +DLNT +A+  L +LAR                 
Sbjct: 346 AAATQPAPGHDAGLETSRQGFIDALDDDLNTSAALAVLFELARPLRALARRLERGAEASG 405

Query: 374 ESTKNHDLLPIFNASAHILGIEVC------KEHLNKNISIAIEKLVQERLILLKMKKFSS 427
           E    H    +    + +LG+E         E         I  L+ ERL   + K++  
Sbjct: 406 EDRALHARWLLLQELSGVLGLEPEISSRSEAEAGAGPAPAQILALISERLAARQQKRYPE 465

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           AD IR +L S+G  L D  +       T W ++
Sbjct: 466 ADAIRDRLRSEGIELIDRPDGT-----TEWIRR 493


>gi|68171834|ref|ZP_00545169.1| Cysteinyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67998744|gb|EAM85461.1| Cysteinyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 459

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 197/476 (41%), Positives = 268/476 (56%), Gaps = 41/476 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL      F      N+R+YVCGPTVYDFAHIGNAR ++++DVL+RLL+  Y    V
Sbjct: 3   IYNTLTGIKEPFVPFSIDNVRVYVCGPTVYDFAHIGNARSVVIYDVLFRLLKLLY--PKV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII  A+        N +I  +T+   + F +D   L CL PT++PRAT
Sbjct: 61  TYVRNITDIDDKIINVAQN------TNQSIYDVTAIYIKAFHEDMKMLNCLEPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           ++I  +I LIQ ++  GHAY  N  + F+  S  +YG  S R I +   G+R+  +  KK
Sbjct: 115 DNIDVIISLIQKLVDSGHAYVYNGSVFFNIESYSSYGQLSGRNISQLIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS  YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEIDNQLMSCWSSPWGLGRPGWHIECSAMSYRYLKENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA    + A  W+HNGFL +   KMSKS GN +T+ +LL +   G    
Sbjct: 235 PHHENEIAQSCCAFPDSRYAKYWVHNGFLTVNDEKMSKSLGNVLTVRQLLNSGITG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
              +IR  +L THYR+P+D+  Q +  A+  L++     +S            +   V+ 
Sbjct: 291 --ELIRYVLLSTHYRKPLDWNSQMVASAQESLNRMYTALSSTNVDLSLDDSVELSSHVID 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGIEV---CKEHLNKN 404
            L +D+NT  AI  LH++  E  K  D++           +A+ LGI            +
Sbjct: 349 CLKDDINTPKAISMLHEMVTEINKTADMIEKISLTKTLIKTANFLGILQHSWQDWFKIDD 408

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +  I +L+ ER        F  AD IR+ L ++G +L D K+       T W +K
Sbjct: 409 NNQEISQLIDERKKARANNDFKRADDIRQLLLNRGIVLSDNKDGT-----THWYKK 459


>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 539

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 177/553 (32%), Positives = 257/553 (46%), Gaps = 121/553 (21%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+      ++P+ ++MYVCGPT Y++ H+GNARP++VFD++ R L+Y   E 
Sbjct: 2   IQVYNTLSRRKERLNTLEPNKVKMYVCGPTTYNYIHLGNARPLVVFDIIRRYLQYKGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKII+R+++E        + + +  K   ++ +D   L      + PR
Sbjct: 61  -VTYVQNFTDVDDKIIQRSQEE------GKSAAEVAGKYIDEYFRDADALGVKRADYHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HIP +I +I+ ++  G+AY    ++ +   +   YG  S R ++E   G RV     
Sbjct: 114 VSDHIPDIIRVIETLVEKGYAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVEVDER 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP WESPWG GRPGWHIECS M+  YLG+  DIHGGG DL+FPH
Sbjct: 174 KEDPMDFALWKEAKPGEPAWESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADLVFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS            W+HNGF+ +   KMSKS GNF  + E+L         +PA
Sbjct: 234 HENEIAQSEAYSG-RPFVRYWLHNGFITVNKEKMSKSLGNFFILREILS-------QYPA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
            V+R  +  THYR P+DF   +L EA   L++   T      +                 
Sbjct: 286 EVVRFYLGSTHYRSPLDFDNTKLEEAGRALARLNNTLRRLNEVVKNEEVEANDETRDADK 345

Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIF 385
                          A+ +D NT  AI  L  +ARE     D             +   +
Sbjct: 346 GFVSRLHELKEKFEVAMDDDFNTAQAIGYLFDMAREINAYLDFWEGEGSSKAPAAIKEAY 405

Query: 386 NAS----AHILG-----------------IEVCKEHLNKNIS------------------ 406
                   +ILG                 IE+  E   + +                   
Sbjct: 406 RVFTLLGGNILGFLSEDFEHKGHGISDKVIEILFEMKEEALESGSLERVERILSCLQSAG 465

Query: 407 IAIEK---------------------LVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           I IE                      L+  R    + K F++AD IR  L+  G ++ED 
Sbjct: 466 IEIEDTFSGSTWRANRPVNVSDLIEPLLSWRSEARRNKDFTTADVIRDNLKKIGVVVEDT 525

Query: 446 KNPDNGQRMTRWK 458
           +         RW+
Sbjct: 526 R------EGARWR 532


>gi|212692228|ref|ZP_03300356.1| hypothetical protein BACDOR_01724 [Bacteroides dorei DSM 17855]
 gi|265752921|ref|ZP_06088490.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
 gi|212665105|gb|EEB25677.1| hypothetical protein BACDOR_01724 [Bacteroides dorei DSM 17855]
 gi|263236107|gb|EEZ21602.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
          Length = 493

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 165/493 (33%), Positives = 245/493 (49%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNFINLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +       I P+
Sbjct: 298 FHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGLERITPS 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------- 387
                            +A+ +DLN+   I  L   AR      D     +A        
Sbjct: 358 AQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAEDLEELKS 417

Query: 388 -----SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   ILGI+      E   +     ++ L+++R+     K ++++D IR +L + G
Sbjct: 418 VFHLFMYEILGIKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRDELAALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEVKDTKDGFTWR 490


>gi|219848629|ref|YP_002463062.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219542888|gb|ACL24626.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 472

 Score =  531 bits (1368), Expect = e-148,   Method: Composition-based stats.
 Identities = 171/493 (34%), Positives = 244/493 (49%), Gaps = 57/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNTL R++   + I+P  +RMYVCG T YD AHIG+A   IVFD++ R L +   
Sbjct: 1   MTIHLYNTLTRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDMIRRYLEFRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V ++ N TDIDDK+I RA+       +      ++ +   +F+     +  L  T  
Sbjct: 61  Q--VRHIVNFTDIDDKVIARAQA------MGQDPLALSGQYAAEFLTQLQAMNVLPATAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR +  +P +I  +Q +I  G+AY  + ++ F      +YG  S R +DE   GTR    
Sbjct: 113 PRVSTTMPGIIAFVQGLIERGYAYVVDGDVYFRVKRDEDYGKLSGRSLDEMLSGTRFEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++PADF LWK + P EP W+SPWG GRPGWHIECSAM+  YLG   DIHGGG DLIF
Sbjct: 173 PRKESPADFALWKAARPGEPAWDSPWGPGRPGWHIECSAMAMEYLGPQIDIHGGGTDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNL------EGRKMSKSNGNFITINELLETKK 296
           PHHENEIAQS      +  A  W+HNG L L      +  KMSKS GN +TI + L    
Sbjct: 233 PHHENEIAQSESLTG-QPFARYWVHNGMLQLVNPQTRQVEKMSKSLGNVVTIADFLSR-- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQ 339
                +   V RL +L + YR P+ +  +   + +  L +                    
Sbjct: 290 -----YDPDVFRLIVLSSSYRSPLTYNDEIAADNQRKLERLLSALAPATGSVREGPAVAA 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASA 389
              +  I     ++A+ ND N+ +A+ AL  L R      D                  A
Sbjct: 345 LREAATIARERFITAMDNDFNSPAALAALFDLVRAINAARDAGLAAEELAIGQQTLRELA 404

Query: 390 HILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +LG  ++  +      ++  IE L++ R  L K K+++ AD +R +L   G  LED   
Sbjct: 405 GVLGLRLQPRQRTPTAEVTPFIELLIEVRGELRKAKQYALADLVRNRLADLGVALED--- 461

Query: 448 PDNGQRMTRWKQK 460
              G   TRWK +
Sbjct: 462 ---GPHGTRWKWQ 471


>gi|88658290|ref|YP_507566.1| cysteinyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|109894900|sp|Q2GG67|SYC_EHRCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88599747|gb|ABD45216.1| cysteinyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 459

 Score =  530 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 197/476 (41%), Positives = 268/476 (56%), Gaps = 41/476 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IYNTL      F      N+R+YVCGPTVYDFAHIGNAR ++++DVL+RLL+  Y    V
Sbjct: 3   IYNTLTGIKEPFVPFSIDNVRVYVCGPTVYDFAHIGNARSVVIYDVLFRLLKLLY--PKV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII  A+        N +I  +T+   + F +D   L CL PT++PRAT
Sbjct: 61  TYVRNITDIDDKIINVAQN------TNQSIYDVTAIYIKAFHEDMRMLNCLEPTYEPRAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           ++I  +I LIQ ++  GHAY  N  + F+  S  +YG  S R I +   G+R+  +  KK
Sbjct: 115 DNIDVIISLIQKLVDSGHAYVYNGSVFFNIESYSSYGQLSGRNISQLIYGSRIDIEVGKK 174

Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           +P DF+LWK +T ++      W SPWG GRPGWHIECSAMS  YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEIDNQLMSCWSSPWGLGRPGWHIECSAMSYRYLKENFDIHGGGADLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA    + A  W+HNGFL +   KMSKS GN +T+ +LL +   G    
Sbjct: 235 PHHENEIAQSCCAFPDSRYAKYWVHNGFLTVNDEKMSKSLGNVLTVRQLLNSGITG---- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
              +IR  +L THYR+P+D+  Q +  A+  L++     +S            +   V+ 
Sbjct: 291 --ELIRYVLLSTHYRKPLDWNSQMVASAQESLNRMYTALSSTNVDLSLDDSVELSSHVID 348

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGIEV---CKEHLNKN 404
            L +D+NT  AI  LH++  E  K  D++           +A+ LGI            +
Sbjct: 349 CLKDDINTPKAISMLHEMVTEINKTADMIEKISLTKTLIKTANFLGILQHSWQDWFKIDD 408

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +  I +L+ ER        F  AD IR+ L ++G +L D K+       T W +K
Sbjct: 409 NNQEISQLIDERKKARANNDFKRADDIRQLLLNRGIVLSDNKDGT-----THWYKK 459


>gi|189347672|ref|YP_001944201.1| cysteinyl-tRNA synthetase [Chlorobium limicola DSM 245]
 gi|189341819|gb|ACD91222.1| cysteinyl-tRNA synthetase [Chlorobium limicola DSM 245]
          Length = 484

 Score =  530 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 155/490 (31%), Positives = 225/490 (45%), Gaps = 49/490 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L R    F+ + P  + MYVCGPTVY  AH+G+A+  + FDV+ R LR      
Sbjct: 3   LQIYNSLSRSKETFEPVHPGVVGMYVCGPTVYGHAHLGHAKSYVSFDVVARWLRQSGY-- 60

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V YV+NITD+    DD      +    +         I    T+ F  D  RL    P 
Sbjct: 61  RVRYVQNITDVGHLSDDADEGEDKIARQARLEKTDPMEIAQFYTRSFYDDMDRLGVERPN 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRV 179
             P AT H+P+ I LI+ ++   HAY  N  + F   S P+YG  S R   +  + GTR+
Sbjct: 121 IAPTATGHVPEQIALIRQLVGSSHAYVVNGNVYFSVQSFPDYGKLSGRTDQEALQSGTRI 180

Query: 180 PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +  K++P+DF LWK++       WESPWG G PGWH+ECSAMS  YLG+  DIHGGG+
Sbjct: 181 EVRNEKRHPSDFALWKKAEEGHIMKWESPWGTGYPGWHVECSAMSMKYLGETVDIHGGGM 240

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           +  FPHH+ EIAQS  A         W+HN  + + G KM KS  N + + +L       
Sbjct: 241 ENKFPHHDCEIAQSEAATG-RPYVRYWMHNNMVTVGGIKMGKSLKNSVNLKDLF------ 293

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------SKGI 346
            R     VIR  +L +HYR P+D++   +  +   L K   T                  
Sbjct: 294 -RETDPMVIRFFILQSHYRSPLDYSEAAIRASSAGLEKLQDTRQRLQKTRPGTGNFDSTA 352

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFNASAH-ILG 393
                 +A+ +D NT  AI  L   ++      D                 +  A  +LG
Sbjct: 353 FTERFTAAMDDDFNTPLAISILFDFSKSVNSALDKQEGLSADSIAEAAAFLDTFAGKVLG 412

Query: 394 IEVCKEHLN--------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           I    +  +        + +   I  L+  R+   K K F+ +D IR +L   G  ++D 
Sbjct: 413 IVSASDEASGHASENSRQTLEKTISILLDMRIEARKNKDFALSDRIRDRLLEAGVEVKDT 472

Query: 446 KNPDNGQRMT 455
           +   +    T
Sbjct: 473 REGVSWSLKT 482


>gi|257067131|ref|YP_003153387.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256799011|gb|ACV29666.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 472

 Score =  530 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 258/487 (52%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+ + IRMYVCGPTVYD+ HIGNARP++VFD   R +++   + 
Sbjct: 1   MKIHNTLTRQKEEFIPIEENKIRMYVCGPTVYDYMHIGNARPLVVFDTFRRYMQFKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT-HQP 123
            V YV N TD+DDKII ++  E            +T K    +++D   L         P
Sbjct: 60  -VKYVVNFTDVDDKIINKSIAE------GITTKEVTDKYIAAYMEDAKDLNIDEDDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RV 179
           RAT  +  +I  ++ ++  G AYE+  ++ FD S   +YG  S + I++   G       
Sbjct: 113 RATEVMDDIISFVKGLVDKGMAYESEGDVYFDVSKADDYGKLSGKNIEDLIHGASNRLDT 172

Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +   KK+P DF LWK++    E  W+SPWG GRPGWHIECS MS   LG+  DIH GG 
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWKSPWGEGRPGWHIECSTMSKKILGETIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS   +  +  AN W+HNG + ++G KMSKS GNF T++++       
Sbjct: 233 DLEFPHHENEIAQSEGLN-EKTFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-TSKGIIDPA------- 350
            + +   +IR  +L T+YR+PI+FT + + +A+  L +        + ++D A       
Sbjct: 285 KKEYDLSIIRFWLLTTNYRQPINFTREIIEQAKASLQRLTNAYFRLEELLDKAEDKDLSE 344

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAR------ESTKNHDLLP----IF 385
                           +  + +DLNT  AI  L  +A+      +S+ + DL+     ++
Sbjct: 345 EEKDLENNLKDFKDKFIEVMDDDLNTADAITVLFDIAKFVNTKLDSSSSKDLVDKTYKLY 404

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                 LG+   K+  + +    IE+L+ +R    K K F++AD IR +L S G  ++D 
Sbjct: 405 KELFESLGLLAKKKEADVD-EEKIEELIAKRSEAKKAKDFATADKIRDELSSMGITIKDT 463

Query: 446 KNPDNGQ 452
           +     +
Sbjct: 464 REGVKWE 470


>gi|224025545|ref|ZP_03643911.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
           18228]
 gi|224018781|gb|EEF76779.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
           18228]
          Length = 492

 Score =  530 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 162/492 (32%), Positives = 243/492 (49%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY   H+G+ARP I FD+LYR L + 
Sbjct: 1   MENKLIIYNTLTRRKELFVPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDILYRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIQLVEEILKNGYAYESKGSVYFDVAKYNKDHHYGVLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRKYLGETF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQ+  A    +  + W+HN  + + G+KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLVFPHHECEIAQA-VASEGHQMVHYWMHNNMITINGQKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +   +   I PA
Sbjct: 298 FTGSNKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGVKNLERITPA 357

Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--------- 387
                            A+ +DLNT   I  L    R      D     +A         
Sbjct: 358 KATSGIEPQGLREKCYEAMNDDLNTPIVISHLFDATRMINTVIDKKATISAEDLEELKSV 417

Query: 388 ----SAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                  +LG++   E+     +     ++ L+++R+     K ++++D IR  L + GF
Sbjct: 418 FHLFVFDLLGLKAEAENNAAREEAYGKVVDMLLEQRMQAKANKDWATSDKIRDNLAALGF 477

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 478 EVKDTKDGFTWK 489


>gi|114327800|ref|YP_744957.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122327235|sp|Q0BT18|SYC_GRABC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114315974|gb|ABI62034.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 470

 Score =  530 bits (1367), Expect = e-148,   Method: Composition-based stats.
 Identities = 199/468 (42%), Positives = 259/468 (55%), Gaps = 36/468 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+       F+ IDP ++++YVCGPTVYD AHIGNAR M+VFDVL R+LR  Y    V
Sbjct: 22  LYNSATHGREPFRPIDPKHVKIYVCGPTVYDLAHIGNARSMVVFDVLARVLRRLY--PRV 79

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY RNITD+DDKI  RAR+         +I  IT++ T  F  D   L  L P  +PRAT
Sbjct: 80  TYARNITDVDDKINARARES------GVSIDEITARTTADFHADMASLGNLPPDIEPRAT 133

Query: 127 NHIPQMIYLIQNIILHGHAYEA----NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
            HI +MI LI+ +I   HAYE        ++F  +S P+YGS S R  DE   G R+   
Sbjct: 134 AHIAEMILLIEKLIAQEHAYETHGEGEGHVLFSVASDPSYGSLSNRSPDELLAGARIDPA 193

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK+P DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DLIF
Sbjct: 194 PYKKDPGDFVLWKPSADDQPGWDSPWGRGRPGWHIECSAMSWRYLGEDFDIHGGGGDLIF 253

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS CA      A+ W+H+  L L+G KMSKS GN +T+ +LL          
Sbjct: 254 PHHENECAQSRCAFPGSHFAHYWMHSAMLLLDGEKMSKSLGNVLTVRDLLG-------QA 306

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIIDPAVLSAL 355
               IRL  L THYR  +DF  + L EA   L ++ +   +          ++  VL AL
Sbjct: 307 DGEAIRLLFLKTHYRGVLDFRYEALKEAGKELDRFYRALQAHPALPDLDETVENPVLEAL 366

Query: 356 YNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGI---EVCKEHLNKNISIAIEK 411
            +DLNT  A+  +H LA      +            ++G+   E             I +
Sbjct: 367 RDDLNTPQALSLMHGLAYAALGGDALAAAQLKEGGMLMGLFTREAEAWFQRGINPDEIAQ 426

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            + +RL   K + F+ AD IR +L   G +LED      G   T W++
Sbjct: 427 RIADRLQARKDRNFAEADRIRNELAEAGILLED------GPSGTTWRR 468


>gi|237711499|ref|ZP_04541980.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
 gi|229454194|gb|EEO59915.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
          Length = 493

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 165/493 (33%), Positives = 245/493 (49%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNFINLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +       I P+
Sbjct: 298 FHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGLERITPS 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------- 387
                            +A+ +DLN+   I  L   AR      D     +A        
Sbjct: 358 AQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAEDLEELKS 417

Query: 388 -----SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   ILGI+      E   +     ++ L+++R+     K ++++D IR +L + G
Sbjct: 418 VFHLFMYKILGIKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRDELAALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEVKDTKDGFTWR 490


>gi|91784175|ref|YP_559381.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358667|sp|Q13X60|SYC_BURXL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91688129|gb|ABE31329.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 465

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 174/484 (35%), Positives = 255/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +  +   +D   L    P  +
Sbjct: 62  N--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIKALHEDADALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIERLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK++ P EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKQDPLDFVLWKQAKPQEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNG++ ++  KMSKS  NF TI E+L      
Sbjct: 234 DLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  +   HYR P++++   + +A   L++                      
Sbjct: 288 --QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALTRLYTALKDVTPDGAELDWNEAYA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKE------- 399
               +A+ +D NT  A+  L +LA E  +  D  L         ++G+   +        
Sbjct: 346 QRFQAAMNDDFNTPVAVSVLFELASEVNRTRDPALARQLRLLGAVIGLLGREPRAYLQQA 405

Query: 400 ----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                +    + AIE  +  R    + K F++AD IR +L   G  LED         +T
Sbjct: 406 AGAAAVGALEAAAIEAKIAARAAAKQAKDFAAADRIRSELLEAGVALEDKPGG-----LT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|294777611|ref|ZP_06743062.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|319640202|ref|ZP_07994928.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
 gi|294448679|gb|EFG17228.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
 gi|317388189|gb|EFV69042.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
          Length = 493

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 165/493 (33%), Positives = 244/493 (49%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILLRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNFINLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +       I PA
Sbjct: 298 FHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGLERITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------- 387
                            +A+ +DLN+   I  L   AR      D     +A        
Sbjct: 358 TQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAEDLEELKS 417

Query: 388 -----SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   ILG++      E   +     ++ L+++R+     K ++++D IR +L + G
Sbjct: 418 VFHLFMYEILGLKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRDELAALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEVKDTKDGFTWK 490


>gi|150003580|ref|YP_001298324.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
 gi|187629793|sp|A6KZ38|SYC_BACV8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149932004|gb|ABR38702.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
          Length = 493

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 165/493 (33%), Positives = 245/493 (49%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSYGNFINLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +       I PA
Sbjct: 298 FHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGLERITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------- 387
                            +A+ +DLN+   I  L   AR      D     +A        
Sbjct: 358 TQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAEDLEELKS 417

Query: 388 -----SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   ILG++      E   +     ++ L+++R+     K ++++D IR +L + G
Sbjct: 418 MFHLFMYEILGLKEEAANNEAHEEAYGKVVDMLLEQRMKAKANKDWATSDKIRDELAALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEVKDTKDGFTWK 490


>gi|145570618|gb|ABP79724.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 436

 Score =  530 bits (1366), Expect = e-148,   Method: Composition-based stats.
 Identities = 180/455 (39%), Positives = 245/455 (53%), Gaps = 46/455 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYDF HIG+AR M+ FDV+ R LR+   +  VTYVRNITDIDDKII RA +  
Sbjct: 1   MYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD--VTYVRNITDIDDKIIRRASEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                 +    +  +      +D TRL  L P  +PRAT+HI  M  +IQ +I  G AY 
Sbjct: 58  -----GEPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAGMHTMIQTLIDKGFAYA 112

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
             N ++ +       YG  SRRKI++ K+G R+     K++P DF+LWK + P EP W+S
Sbjct: 113 PGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDFVLWKGAKPGEPSWDS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECS MS+  LG+ FDIHGGG DL+FPHHENEIAQS  A   +  AN W+
Sbjct: 173 PWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATG-KLYANAWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G + ++G KMSKS GNF TI E+LE        +   V+R  ++ +HYR PI+++   
Sbjct: 232 HAGAVRVDGEKMSKSLGNFFTIREVLE-------KYHPEVVRYLLVSSHYRSPINYSEDS 284

Query: 327 LTEAEILLSKWPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLARESTKN 378
           L EA+  L ++           PA          +A+ +D N+  A   L ++ RE  + 
Sbjct: 285 LREAKSALERFYNGLKGLPEAQPAGGDEFVARFAAAMDDDFNSPEACAVLFEMIREVNRL 344

Query: 379 HD--------LLPIFNASAHILGIEVCK-------EHLNKNISIAIEKLVQERLILLKMK 423
            +        L       A +LG+   +           K  +  +E L+  RL     K
Sbjct: 345 READLAAAAALAARLKVLAGVLGVLQLEPDAFLQAGAAGKVDAAEVEALIAARLAARAEK 404

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  +D IR QL + G +LED K        T W+
Sbjct: 405 NWGESDRIRDQLTAMGVVLEDGK------GGTTWR 433


>gi|331701830|ref|YP_004398789.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129173|gb|AEB73726.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 468

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 175/492 (35%), Positives = 261/492 (53%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL RK  +F+ I P  ++MYVCGPTVY++ HIGNAR  I FD + R L Y   + 
Sbjct: 2   LQIFNTLTRKKEKFEPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  ARQ H ++        I  K    F++DT  L   +    PR
Sbjct: 61  -VKYVSNFTDVDDKMINAARQNHTTVG------AIADKYINAFMQDTAALNISSNVIHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IP++I  ++ ++  G+AY+ + ++ F      +YG+     +D+ ++G        
Sbjct: 114 ATENIPEIIDFVKTLVDKGYAYDVDGDVYFRARKFKSYGALPHINVDQLEIGASQHVNPE 173

Query: 185 ----KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK+S   E  W+SPWG+GRPGWHIECS MS+ YLGK  DIHGGG DL
Sbjct: 174 EMAKKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHGGGEDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
           IFPHHENE AQS      +     W+HNGF+ +  +  KMSKS GNFIT+++LL      
Sbjct: 234 IFPHHENERAQSEANTG-QTFVKYWMHNGFVTIGDDNEKMSKSLGNFITVHDLL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            ++    VIRL M  THYR PI ++   + EA   L K                    P+
Sbjct: 287 -KNLDGQVIRLLMSTTHYRRPIQYSDASVKEASSNLKKLQTAFNNLEYRLHNADEGDDPK 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
           T      I      A+ +D N  + I A+++LA+ +    +           ++      
Sbjct: 346 TDQEVRQIVADFTDAMDDDFNVQNGIAAVYELAKFANTYSERETVFKLSLQFIINTLRQL 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           + + GI++ +  L  +    I  L+ ER      K F  +D IR++L+++G +LED    
Sbjct: 406 SGVFGIKLEQSELKDD---EIWSLIHEREQARHDKDFIRSDEIREELKARGIVLEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TR++++
Sbjct: 460 ---PQGTRFRKE 468


>gi|90415956|ref|ZP_01223889.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90332330|gb|EAS47527.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 450

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 192/470 (40%), Positives = 259/470 (55%), Gaps = 42/470 (8%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +      FQ ID   + MYVCGPTVY+  HIGNARP +VFD LYRLL   Y    V Y R
Sbjct: 1   MTCSKQPFQPIDSQRVTMYVCGPTVYNRVHIGNARPAVVFDTLYRLLTSLY--PNVQYAR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           NITDIDDKI++ A +      + + IS+++++  + +  D   L  L PT  P AT HIP
Sbjct: 59  NITDIDDKIMKTAAE------LGEDISVLSTRYAEAYFDDMQALNNLPPTIVPYATQHIP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           +M  +I  ++   HAYE+   ++F   S+ +YG  S R +D+   G RV    +KK   D
Sbjct: 113 EMTDMISRLVAKEHAYESEGHVLFAVQSMADYGKLSGRSLDDMLAGARVEVASYKKYAGD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           FILWK S   EPGW+SPWGRGRPGWH+ECSAM   +LG+  DIHGGG DLIFPHHENEIA
Sbjct: 173 FILWKPSADDEPGWDSPWGRGRPGWHLECSAMIEKHLGESIDIHGGGQDLIFPHHENEIA 232

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSCCA   +  AN+W+HNGF+N+EG KMSKS GNF  +N+LLE        +P  V+R  
Sbjct: 233 QSCCAHDGKPVANVWMHNGFINIEGEKMSKSLGNFRMVNDLLE-------QYPGEVLRYV 285

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSALYNDLNTV 362
           +L  HYR   +F    L  A   L              + +  I D    +AL +DLNT 
Sbjct: 286 ILSAHYRSEQNFGKDLLDSAWRSLDAIYGFLRTQVGIEAAAVDIADTHAYAALLDDLNTP 345

Query: 363 SAIQALHKLARESTKN-----HDLLPIFNASAHILGIEVCKEH--------LNKNISIAI 409
            AI  LHK ARE          +      A A ++G+               +   +  I
Sbjct: 346 VAISELHKFAREMNAADGDALAEAKGRLLAVAGLMGLLQQDPEQWFTHSRGGSDISAEEI 405

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           E L+ +R      K ++ AD +R++L++ G +LED +        T+W++
Sbjct: 406 EVLIAKRNQAKADKDYAGADGVREELKAMGVVLEDSR------EGTKWRR 449


>gi|228970278|ref|ZP_04130937.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228789387|gb|EEM37307.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
          Length = 440

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 165/464 (35%), Positives = 238/464 (51%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + + +  I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 57  ----LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWPQT---------------------STSKGIIDPAVLSALYNDLNTVSAIQ 366
                 L +                                  A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +               +        ILG+E+ +E L   +   IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKDRNIILEDT------AQGTRWKR 439


>gi|28198209|ref|NP_778523.1| cysteinyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|28056279|gb|AAO28172.1| cysteinyl-tRNA synthetase [Xylella fastidiosa Temecula1]
          Length = 474

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 187/486 (38%), Positives = 268/486 (55%), Gaps = 49/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG
Sbjct: 8   MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 67

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   A+++   I      S IT +    + +D  +L    P  +
Sbjct: 68  --ALRYARNITDVDDKINTAAQEQGVPI------SAITERFCAAYREDMKKLGVEPPDIE 119

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV   
Sbjct: 120 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIA 179

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 180 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 239

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++EL+          
Sbjct: 240 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVAKH------- 292

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALY 356
           P   +R A+L  HYR+P+D++   + ++   L++   T        ++ II   + +AL 
Sbjct: 293 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALD 352

Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
           +DLNT  A+  L  LA E+      T +H    +  A   +                   
Sbjct: 353 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPE 412

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +  N++    I+ L+  R    + + F  AD IR QL ++G +LED        + 
Sbjct: 413 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 466

Query: 455 TRWKQK 460
            RW ++
Sbjct: 467 VRWMKQ 472


>gi|319405467|emb|CBI79086.1| Cysteinyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 502

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 224/503 (44%), Positives = 306/503 (60%), Gaps = 51/503 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++ YNTL RK  +F  ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3   ELRFYNTLTRKKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITD+DDKI  +A  ++P++ +NDAI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYARNITDVDDKINAKAAFQYPNLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++ +LI+ ++  G+AY A+N I+F   S+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRFLIERLLEKGYAYIADNHILFSVGSMGDNPRYGMFAKRSLDEMRAGARIE 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL---------- 227
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L          
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGIPVLGRPGWHIECSAMSMAKLLSPYGGGFVC 242

Query: 228 ----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG+DLIFPHHENEIAQSC A   E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NF+TI  LLE   F           R W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFVTIRSLLENDFFEFAGILSDEIKRIWAGLSIRFSMLQTHYREPLNWTMQRLVQSSNEL 362

Query: 335 SKWPQTSTSKG-------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
             W +   S+         +D +++  L NDLNT + I  L K      K H+++ +   
Sbjct: 363 YHWYELLRSEKWCLDDKQSVDSSLIKTLSNDLNTWNTITILRKFY----KKHNVVALARG 418

Query: 388 SAHILGIEVCKEHLNKNIS----------IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               LG+   +    K               I++ + ERL L+  K++++AD IR +L +
Sbjct: 419 M-DFLGLLRQEFIKEKECPLFISKMHFDLQFIDQRIAERLCLIHNKEWAAADKIRDELAA 477

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
            G  L+D K+P  G+R+T W+ K
Sbjct: 478 GGIFLKDSKDPQTGERITTWETK 500


>gi|265764886|ref|ZP_06093161.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
 gi|263254270|gb|EEZ25704.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
          Length = 491

 Score =  530 bits (1365), Expect = e-148,   Method: Composition-based stats.
 Identities = 171/491 (34%), Positives = 246/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L   
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT+NE 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLNEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++    IR  +L  HYR P+DF+ + L  AE  +S+  +   S   I PA
Sbjct: 298 FSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGMSRLMEAVDSLEKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASA 389
                           A+ +DLNT   I  L   A+            + D L       
Sbjct: 358 ATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLKNLKEVF 417

Query: 390 H-----ILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H     ILG++      +         ++ L+++R+     K ++++D IR +L + GF 
Sbjct: 418 HTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGFEWK 488


>gi|182680844|ref|YP_001829004.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|61252101|sp|Q87EL7|SYC_XYLFT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|182630954|gb|ACB91730.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M23]
          Length = 467

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 187/486 (38%), Positives = 268/486 (55%), Gaps = 49/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG
Sbjct: 1   MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   A+++   I      S IT +    + +D  +L    P  +
Sbjct: 61  --ALRYARNITDVDDKINTAAQEQGVPI------SAITERFCAAYREDMKKLGVEPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV   
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++EL+          
Sbjct: 233 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVAKH------- 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALY 356
           P   +R A+L  HYR+P+D++   + ++   L++   T        ++ II   + +AL 
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALD 345

Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
           +DLNT  A+  L  LA E+      T +H    +  A   +                   
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPE 405

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +  N++    I+ L+  R    + + F  AD IR QL ++G +LED        + 
Sbjct: 406 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 459

Query: 455 TRWKQK 460
            RW ++
Sbjct: 460 VRWMKQ 465


>gi|167907149|ref|ZP_02494354.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 471

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 189/485 (38%), Positives = 257/485 (52%), Gaps = 46/485 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I ++NTL R+    Q   P  + MYVCGPTVY++AHIGNARP +VFDVL RLLR+ 
Sbjct: 1   MNLPIYLHNTLTRRKEPLQTTTPDRVTMYVCGPTVYNYAHIGNARPAVVFDVLSRLLRH- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V Y RN TD+DDKI   A      +     I  IT +    +  D   L  L+P 
Sbjct: 60  -DYPQVVYARNFTDVDDKINAAA------VAAGVPIGTITDRYIDAYHADMQALGVLSPE 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP +I LI+ ++  GHAY     ++F   S P YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPAIIELIETLLARGHAYVVQGHVLFHVPSYPEYGHLSGRRTEDMLAGARVE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK STP  PGW+SPWGRGRPGWH+ECSAM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTPDLPGWDSPWGRGRPGWHVECSAMIGQHLGHTIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  CA         W+HN F+ ++G+KMSKS GN + + +LL        
Sbjct: 233 IFPHHENEIAQGTCAHGT-LYCRTWVHNSFVTVDGQKMSKSLGNVLLVRDLLA------- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVL 352
             P   IRLA+L THYR P+D+  QRL+ A   L+++ ++ +    +        DP +L
Sbjct: 285 QAPGEAIRLALLSTHYRRPLDWNAQRLSAARQTLTRYYESLSKVAQVAVVPQIAADPQLL 344

Query: 353 SALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL---- 401
            AL NDLN   A       +  L     ++ + H    +   SA +LG+           
Sbjct: 345 EALRNDLNVPGALVRLHVLLTVLDDADTDAERAHAKSALL-TSAALLGLLQQPPQAALAQ 403

Query: 402 ----------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                            I+ L+ ER    + + F+ AD +R+ LE+ GF +ED       
Sbjct: 404 LRPAAPATAVQGLGDTRIKALLAEREQARRDRDFAKADALRETLEAAGFTIEDTSAGSVL 463

Query: 452 QRMTR 456
           +  T+
Sbjct: 464 RPATK 468


>gi|71900828|ref|ZP_00682946.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|71729398|gb|EAO31511.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
          Length = 467

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 187/486 (38%), Positives = 269/486 (55%), Gaps = 49/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG
Sbjct: 1   MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   A+++   I      S IT +    + +D  +L    P  +
Sbjct: 61  --ALRYARNITDVDDKINTAAQEQGVPI------SAITERFCAAYREDMKKLGVEPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV   
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSYQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++EL+          
Sbjct: 233 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVAKH------- 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALY 356
           P   +R A+L  HYR+P+D++   + ++   L++   T        ++ II   + +AL 
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALD 345

Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
           +DLNT  A+  L  LA E+      T +H+   +  A   +                   
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHEAAEVTTALTRLKAKLLGAGLALGLLQQTPE 405

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +  N++    I+ L+  R    + + F  AD IR QL ++G +LED        + 
Sbjct: 406 AWFSQGTNESDETHIQALIDARSAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 459

Query: 455 TRWKQK 460
            RW ++
Sbjct: 460 VRWMKQ 465


>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 562

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 186/508 (36%), Positives = 263/508 (51%), Gaps = 74/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K++ ++NT+ RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   
Sbjct: 63  KELWLHNTMSRKKELFKPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGY 122

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V+YVRN TD+DDKII RA +      + +    ++ +  ++F +D  +L CL P+ Q
Sbjct: 123 E--VSYVRNFTDVDDKIIARANE------LGEDPISLSRRFCEEFKRDMEQLQCLDPSVQ 174

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  ++HIPQ++ LI+ I+ +G+AY+ + +I F     P YG  S RK+++ + G RV   
Sbjct: 175 PLVSDHIPQIVDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVD 234

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+PADF LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  FDIHGGG+DL+F
Sbjct: 235 TRKKHPADFALWKTAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVF 294

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSC A      +  WIHNGF+ ++  KMSKS GNF TI ++++        +
Sbjct: 295 PHHENEIAQSCAACDSSNIS-YWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL-------Y 346

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------------- 339
               +RL ++ THYR PI+++   L  A   +    Q                       
Sbjct: 347 HPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESLLGEKDSTFGNDSVPS 406

Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHK----------------LARESTKNHDLL 382
            T T+        ++++ +DL T   + A+ +                 AR       L 
Sbjct: 407 DTLTTINTFHSEFVASMSDDLLTPVTLAAMSEPLKTINDIIHTRKGKKQARREESLKALE 466

Query: 383 PIFNASAHILG---------IEVCKEHLNKNISIAIE---KLVQERLILLKMKKFSSADY 430
                   ILG         +E  KE   K   +  E   + VQER    K K++  +D 
Sbjct: 467 TTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDA 526

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IRK L S G  L D          T W+
Sbjct: 527 IRKDLASVGIALMDS------PEGTTWR 548


>gi|170738802|ref|YP_001767457.1| cysteinyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168193076|gb|ACA15023.1| cysteinyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 460

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 206/482 (42%), Positives = 277/482 (57%), Gaps = 51/482 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R    F  IDPS +RMY CGPTVYD AHIGN RP+IVFD+L+RLLR+ 
Sbjct: 1   MAPLLRLYNTLTRAKEPFAPIDPSRVRMYACGPTVYDAAHIGNGRPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTYVRN+TD+DDKI  RA +         +I  +T +    F  D  RL  L P 
Sbjct: 61  YGADAVTYVRNVTDVDDKINARAAER------GVSIRTLTDETLAGFHADLRRLGVLMPE 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  +I+ ++  GHAY A + ++FD  S+P+YG+ SRR 
Sbjct: 115 DVNRPGARPAFIEPRATDHIAEMAQMIERLVAAGHAYLAEDHVLFDVPSMPDYGALSRRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S P EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMEAGARVDVAPYKRSPLDFVLWKPSKPGEPAWPSPCGIAAPGRPGWHIECSAMSWRH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GG+DL+FPHHENE+AQS C       AN+W+HNGFL +EG KMSKS GNF+
Sbjct: 235 LGETFDIHAGGIDLVFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGDKMSKSLGNFV 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG- 345
           T+ E+L         WP   +RLAML THYR+PID+T++ L EA   L +W ++    G 
Sbjct: 295 TLREVLAD-------WPGEAVRLAMLRTHYRQPIDWTLRALEEASRTLERWYESVGDLGP 347

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V  AL +DLNT +A+  LH+L        +      A A ++G+         
Sbjct: 348 APAVPEGVRDALLDDLNTPAALGELHRL--------EDPAALKAGAGLMGLLGATRSARA 399

Query: 404 NIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +         A+E L+  R      K ++ +D +R  L   G  ++D K+       T
Sbjct: 400 EAAVAASGIDVAAVEGLIAARKAARAAKNWAESDRLRGALAGMGVTVKDNKDGT-----T 454

Query: 456 RW 457
            W
Sbjct: 455 TW 456


>gi|222148112|ref|YP_002549069.1| cysteinyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735100|gb|ACM36063.1| cysteinyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 588

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 219/416 (52%), Positives = 280/416 (67%), Gaps = 15/416 (3%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + +K+YNTL R   +F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVLYRLLR+ 
Sbjct: 43  MAEGLKLYNTLTRSKVDFTPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLYRLLRHI 102

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTY RNITD+DDKI  RA ++ P +P+N+AI+ +T K   QF  D   L  L PT
Sbjct: 103 YGENHVTYARNITDVDDKINARALRDFPDLPLNEAIAKVTQKTADQFHADVAALGNLPPT 162

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT++I QMI +I+ +I  GHAY A  E++FDT S+  YG  S+R +DEQ+ G R+ 
Sbjct: 163 IEPRATDNIQQMIDIIKTLIAKGHAYVAEGEVLFDTRSMAAYGQLSKRNLDEQQAGARIA 222

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            + HKK+P DF+LWK S+  EPGWESPWGRGRPGWHIECSAMS  YLG+VFDIHGGGLDL
Sbjct: 223 VEAHKKHPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGEVFDIHGGGLDL 282

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQSCCA+     AN+W+HNGF+ +EGRKMSKS+GNF+TI++LL +  FGGR
Sbjct: 283 IFPHHENEIAQSCCANDTSVMANVWMHNGFVQVEGRKMSKSDGNFLTIDQLLRSDSFGGR 342

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQTSTSKG 345
            W   V R AML THYR+PID+T+ +L ++   +  +                ++     
Sbjct: 343 PWHGGVFRFAMLKTHYRQPIDWTLDKLQQSRNEIFSFIASCNAGLIISQINAKRSLGKAT 402

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
             D   + AL +DLNT  A+  L  L   +  + +       +   LGI    +  
Sbjct: 403 EQDADFIKALCDDLNTPLALSILFGLRENAKSDSNAAEKMFLALEFLGILDLSKWA 458



 Score = 89.1 bits (220), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/64 (43%), Positives = 40/64 (62%)

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            K     ++S AI+ LV+ RL +LK K F+ AD IR  L +KG  L+D K+ D G+R+T 
Sbjct: 524 LKNGETNDLSAAIDALVEMRLEMLKTKNFAEADKIRDDLLAKGIQLKDGKDKDTGERVTT 583

Query: 457 WKQK 460
           W+ K
Sbjct: 584 WEVK 587


>gi|160897948|ref|YP_001563530.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|229558629|sp|A9BZ45|SYC_DELAS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160363532|gb|ABX35145.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 461

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 181/478 (37%), Positives = 257/478 (53%), Gaps = 44/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R +  F  I+P ++RMYVCG TVYD  H+G+AR M+ FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRALEAFSPIEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASG- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    PTH+
Sbjct: 60  -HRVTYVRNITDIDDKIIRRA------VENGETIRSLTDRMIDALHQDADALGIERPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+  + ++ F     P YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLSMIGRLQDKGLAYQGTDGDVNFAVRKFPGYGKLSGKSLDELQAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF+LWK + P EP    W SPWG GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 173 QDGKQDPLDFVLWKSAKPAEPEEVKWASPWGVGRPGWHIECSAMGCEMLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  + +W+HNGF+N++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFSQVWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            + + A  +R  ++ +HYR P++++   L +A   L +     +     + A        
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSDVHLNDARGALKRLYTALSLVAPAEVAVDWNHPAA 344

Query: 351 --VLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIE------VCKEH 400
               +A+  D  T  A+  L +LA E    K+ +   +  A A  LG+         +  
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSAETAGLLKALAGCLGLLQGDPQAFLQAG 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            ++  + AIE  +  R      K ++ AD IRK L  +G +L+D          T W+
Sbjct: 405 TSEMDAGAIEAQIAARAAAKAAKDWAEADRIRKALLEQGIVLKDS------PAGTTWE 456


>gi|225629958|ref|YP_002726749.1| Cysteinyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|254781700|sp|C0R5B6|SYC_WOLWR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225591939|gb|ACN94958.1| Cysteinyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 457

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 196/475 (41%), Positives = 277/475 (58%), Gaps = 41/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFIPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  IT+   + F  D   + C  PT++P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKKPTYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  W+HNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAV 351
                VIR A+L THYR+P+D+T   +++A+  L+K+ + S          S   I    
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDF 347

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE---VCKEHLN 402
           + AL NDLN   A+  LH++A +  K  +      L   F  SA  +G+      +    
Sbjct: 348 IDALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTA 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 IE+L+  R    + K +++AD IR QL+  G  + D ++       T W
Sbjct: 408 GVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLKQIGVTISDNEDGT-----TTW 457


>gi|58699028|ref|ZP_00373873.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534456|gb|EAL58610.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 468

 Score =  529 bits (1364), Expect = e-148,   Method: Composition-based stats.
 Identities = 196/475 (41%), Positives = 277/475 (58%), Gaps = 41/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 13  VRLYNTLTKKKELFIPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 71

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  IT+   + F  D   + C  PT++P+
Sbjct: 72  -VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKKPTYEPK 124

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 125 ATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 184

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 185 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 244

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  W+HNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 245 QFPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 302

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAV 351
                VIR A+L THYR+P+D+T   +++A+  L+K+ + S          S   I    
Sbjct: 303 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDF 358

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE---VCKEHLN 402
           + AL NDLN   A+  LH++A +  K  +      L   F  SA  +G+      +    
Sbjct: 359 IDALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTA 418

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 IE+L+  R    + K +++AD IR QL+  G  + D ++       T W
Sbjct: 419 GVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLKQIGVTISDNEDGT-----TTW 468


>gi|86609278|ref|YP_478040.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|109894953|sp|Q2JKL2|SYC_SYNJB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86557820|gb|ABD02777.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 525

 Score =  529 bits (1363), Expect = e-148,   Method: Composition-based stats.
 Identities = 176/546 (32%), Positives = 243/546 (44%), Gaps = 111/546 (20%)

Query: 5   IKIYNTLERKITEFQAIDPSN----------------------IRMYVCGPTVYDFAHIG 42
           + +YNTL R+   FQ +                          +RMYVCG TVYD  H+G
Sbjct: 1   MVVYNTLTRRKEVFQPLAAGGSQSVSVGNSQGSAAPVAEEKPLVRMYVCGVTVYDLCHLG 60

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  +V+D++ R L +      V YV+N TD+DDKI++RA      +   +++  +  +
Sbjct: 61  HARTYVVWDMVRRYLEWRGY--RVKYVQNFTDVDDKILKRA------LERGESMQAVAER 112

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN------------ 150
              ++ +D   L        PRAT  +  M  LIQ++ L G AY   +            
Sbjct: 113 FIAEYFRDMDCLNIKRADFYPRATQSLQAMFQLIQSLELKGFAYRVRDPIRHQTDQSSLL 172

Query: 151 --------------EIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PEKYHKKNPADFIL 193
                          + +     P+YG  S RK++E + G       E   K++P DF L
Sbjct: 173 QAGHQPETPASVQYSVYYSVRKFPDYGQLSGRKLEEMEAGASGRVGEEGAEKQDPFDFAL 232

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK + P EPG+ SPWG GRPGWHIECSAM    LG   DIH GG DLIFPHHENE+AQS 
Sbjct: 233 WKAAPPSEPGFASPWGWGRPGWHIECSAMVRETLGDHIDIHAGGADLIFPHHENELAQSE 292

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +  A  W+HNGFLN+ G KMSKS GNF T+ + L         +    +RL +L 
Sbjct: 293 PITG-KPMAKYWMHNGFLNINGEKMSKSLGNFTTLRQALAV-------YHPMALRLFLLQ 344

Query: 314 THYREPIDFTVQRLTEAEILLSKWP------------QTSTSKGIIDPAVLSALYNDLNT 361
           THYR PID T   +  A                    +  +       A  +A+ ND  T
Sbjct: 345 THYRSPIDLTEAAMQAASRGWETLQKGIHCAQHFCKEEKGSPDAEAMQAFQAAMDNDFGT 404

Query: 362 VSAIQALHKLARESTKNHDLL-----------------PIFNASAHILG--------IEV 396
             A+    +LA+E T+ H+L                           LG         E 
Sbjct: 405 PEALAIAFELAKELTREHNLFTHQGQTHLEPQALKQKSAALLEILATLGFCWPSFSEFEG 464

Query: 397 CKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            KE     +     IE+L+ +R    K K FS AD IR QL++ G  L D K+       
Sbjct: 465 SKEAATNGELNFKKIEELIAQRSAARKAKNFSEADRIRDQLKALGITLIDQKDGT----- 519

Query: 455 TRWKQK 460
           TRW ++
Sbjct: 520 TRWLRE 525


>gi|332094204|gb|EGI99255.1| cysteinyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 437

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 171/459 (37%), Positives = 246/459 (53%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LR+   +  + YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK--LKYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY 
Sbjct: 58  -----GESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIEEIIELTEQLIAKGHAYV 112

Query: 148 AN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+  +++FD  + P YG  SR+ +D+ + G RV     K+NP DF+LWK S   EP W S
Sbjct: 113 ADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDG-QYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + 
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284

Query: 327 LTEAEILLSKWPQ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST- 376
           L +A   L +                    +   + A+ +D NT  A   L  +ARE   
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 377 -KNHDLLPI------FNASAHILGIEVCK--------EHLNKNISIAIEKLVQERLILLK 421
            K  D+             + +LG+   +           + +    IE L+Q+RL   K
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K +++AD  R +L   G +LED      G + T W++K
Sbjct: 405 AKDWAAADAARDRLNEMGIVLED------GPQGTTWRRK 437


>gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 483

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 179/498 (35%), Positives = 253/498 (50%), Gaps = 67/498 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL  +  EF+ ++   ++MYVCG TV +++HIG+ R +I +DV+ R L Y   + 
Sbjct: 2   IKVYNTLTGEKEEFKPVEKDKVKMYVCGLTVQNYSHIGHIRSVINYDVIRRFLEYLGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TDI++KI++RA +E          + + +K    F++D             R
Sbjct: 61  -VDYISNFTDINEKIVQRAAEEDLK------PAALANKYANAFLEDLREFNVKPADKYLR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + ++ ++I ++  +I  G+AYE N  + F   S  +YG  S R +DE + G R+     
Sbjct: 114 VSENVAEIIEMVTTLIEKGYAYEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNKE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK+    E GW+SPWG G PGWHIECSAMS   LG  FDIHGGG+DLIFPH
Sbjct: 174 KRNPLDFGLWKKV-ESETGWDSPWGEGWPGWHIECSAMSMKRLGSTFDIHGGGVDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+HNG +NL G KMSKS GNF T  E+L       + + A
Sbjct: 233 HENEIAQSEAYSDQK-FVNYWLHNGTVNLSGEKMSKSQGNFFTSREVL-------KEFSA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
            V+R  +L  HYR PIDF+ ++L EA   L++   T      +                 
Sbjct: 285 EVVRYFLLTRHYRSPIDFSYEKLEEAATSLTRIKNTRKQLAKVLSLDINSAAENKIEQEF 344

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLL----PI 384
                      ++AL +D NT  AI  +H LA E              KN  LL     I
Sbjct: 345 FENIISKKKEFIAALKDDFNTAEAIGVIHDLAGEINSYINRKEFDLNEKNFALLTKTEKI 404

Query: 385 FNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           F     ILG+E   E  +++    +S  +  L++ R    + K +  AD IR QLE  G 
Sbjct: 405 FLELIEILGLEFKLESASESESELVSPLVNLLIKLRNKARENKNWQEADLIRDQLEEIGI 464

Query: 441 ILEDYKNPDNGQRMTRWK 458
            + D          T W+
Sbjct: 465 EVIDS------PHGTEWE 476


>gi|16124715|ref|NP_419279.1| cysteinyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233429|ref|YP_002515865.1| cysteinyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|24418699|sp|Q9AAY2|SYC_CAUCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781233|sp|B8GZS3|SYC_CAUCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13421633|gb|AAK22447.1| cysteinyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220962601|gb|ACL93957.1| cysteinyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 463

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 194/481 (40%), Positives = 271/481 (56%), Gaps = 42/481 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KI++TL R+  +F   DP  + MYVCGPTVY++AHIGN RP++VFDVL+R+LR+ YG
Sbjct: 1   MTLKIHDTLTREKRDFVPADPQRVTMYVCGPTVYNYAHIGNFRPVVVFDVLFRVLRHLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y RN+TD+DDKI ++A  E   I      S+IT +    + +D   L  L PT +
Sbjct: 61  EDAVVYARNVTDVDDKINQKAADEGVPI------SVITDRYLAAYHQDADALGALRPTLE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  ++ +I  ++ +G AY A   ++FDT S  +YG  S R +DE   G RV   
Sbjct: 115 PKATEHIGAILEMIGQLVENGSAYAAEGHVLFDTQSFADYGQLSGRPLDEMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++PADF+LWK S   EP WESPWG GRPGWHIECSAM    LG+  DIH GG+DL F
Sbjct: 175 PYKRHPADFVLWKPSKENEPEWESPWGAGRPGWHIECSAMIDKALGQTIDIHAGGIDLTF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA +    AN W+HNGFL++ G KMSKS GN I  +ELLET        
Sbjct: 235 PHHENEVAQSRCAHKTSVLANYWMHNGFLDMSGEKMSKSLGNVIIPHELLETT------- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
           P  VIR A+L  HYR+P+D+T + L +++  L +          + P         V+SA
Sbjct: 288 PGEVIRWALLSAHYRQPLDWTPELLEQSKKSLDRLYGALRRAKDVAPDQAMEAPAEVMSA 347

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEV------CKE 399
           L +DLNT  A  A  +++    K                   +  +LG          + 
Sbjct: 348 LMDDLNTPLATSAFFEVSSAIEKAVTAGDTVAIAANKARLLEAGALLGFLQADPDAWFEG 407

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +  +   +E L+ +R+     K +S+AD IR +L++ G ++ D      G     W+ 
Sbjct: 408 DASDELKAQVEDLLAKRVAARAAKDWSAADAIRGELDALGVVVMD------GPAGATWRM 461

Query: 460 K 460
           K
Sbjct: 462 K 462


>gi|329964460|ref|ZP_08301514.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
 gi|328524860|gb|EGF51912.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
          Length = 491

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 166/491 (33%), Positives = 245/491 (49%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEELEPMEVAQYYINRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  L + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMLTINGQKMGKSYGNFITLEEL 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            + T     +++    IR   L  HYR  +DF+ + L  AE  LS+          I PA
Sbjct: 298 FKGTHPLLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLSRLMDAVHGLDKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                           A+ +DLN+   I  L   A+                  +L   F
Sbjct: 358 AVSTVDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDTVTTEDLKELKETF 417

Query: 386 NAS-AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +     ILG++      E         ++ L++ER+     K ++++D IR +L + GF 
Sbjct: 418 HTFCFDILGLKEDNASNEEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K     +
Sbjct: 478 IKDGKEGCEWK 488


>gi|269958884|ref|YP_003328673.1| cysteinyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848715|gb|ACZ49359.1| cysteinyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 467

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 197/484 (40%), Positives = 273/484 (56%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   D   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLRASKRVFSPRDGKRVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E        +I+ +T+  T+ F +D   L CL PT +P+
Sbjct: 60  -VVYVRNITDVDDKIINAANSE------GKSIAELTAHYTKLFHEDIKELNCLPPTFEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLFIIGKLIETGHAYVRGGTVYFSVESYEHYGALSGRKLCDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG+ FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWSSPWGVGRPGWHVECSAMSYRYLGESFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENE++QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL +     
Sbjct: 233 MFPHHENELSQSCCAFHGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLNS----- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIID 348
                 V+R A L THYR+P+D+  + + +A+  L+K  +           T      + 
Sbjct: 288 -GVDGEVVRYAFLSTHYRKPLDWGDKLVLDAKEALNKIYRSCEGFPAKLLNTGLEYVDVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEH 400
             V+S+L +D+NT  AI ALH+L +E  K  D      L  + N SA ++G+     +  
Sbjct: 347 DGVMSSLQDDINTPGAIAALHELVKEINKASDSDEKLRLAKMLNKSAMLMGLFHNFPERK 406

Query: 401 LNK----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +          IE+L+ +R+   K   F  AD IRK L S G  + D K+       TR
Sbjct: 407 FSSIQNLVNEDEIERLIAKRIEAKKCGDFKLADEIRKNLSSMGIGVSDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|255010223|ref|ZP_05282349.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313148019|ref|ZP_07810212.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
 gi|313136786|gb|EFR54146.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
          Length = 491

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 170/491 (34%), Positives = 246/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L   
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWKR+ P     W SPWG G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++    IR  +L  HYR P+DF+ + L  AE  LS+  +       I PA
Sbjct: 298 FSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDGLEKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASA 389
                           A+ +DLNT   I  L   A+            + D L       
Sbjct: 358 ATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLKELKEVF 417

Query: 390 H-----ILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H     ILG++      +         ++ L+++R+     K ++++D IR +L + GF 
Sbjct: 418 HTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGFEWK 488


>gi|296268495|ref|YP_003651127.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296091282|gb|ADG87234.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 464

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 165/484 (34%), Positives = 251/484 (51%), Gaps = 51/484 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R + EF  I+P  + +Y+CG TV    HIG+ R  + FDVL R L     
Sbjct: 1   MSLHLYDTSTRTVREFVPINPGRVSIYLCGATVQAPPHIGHIRCGVAFDVLRRWLMRLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+ RN+TD+DDKII+ A +E     +      +  +N + F     +L CL PT +
Sbjct: 61  D--VTFCRNVTDLDDKIIKVAAEEGVPWFV------VAERNQRLFTWAYDQLGCLPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           PRA  HIP+MI LI+ ++  GHAY A N++ FD  S  + YG  S ++++  +       
Sbjct: 113 PRAMGHIPEMIELIKRLLDKGHAYVAGNDVYFDVRSFADRYGRLSNQRLEHMRPAGDTEN 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK + P EP W +PWGRGRPGWH+ECSAM++ YLG+ FDIHGGG+DLI
Sbjct: 173 ESLKRDPRDFALWKGAKPGEPSWPTPWGRGRPGWHLECSAMATKYLGETFDIHGGGVDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG L + G KMSKS GN + I+E+L       R 
Sbjct: 233 FPHHENEIAQSQAAGDG--FARYWVHNGLLKVGGEKMSKSLGNSLLISEIL-------RK 283

Query: 302 WPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                +R  ++  HYR  +D++           +R+       ++      +   +    
Sbjct: 284 VRPIELRYYLVAAHYRSELDYSEEALKEAAAAFRRIEGFVNRAAEMIHDVDAAAPLPQPF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHL- 401
           + A+ +DLN   A+  +H++ RE               LL        +LG++   E   
Sbjct: 344 VDAMNDDLNVPQALAVVHEVVREGNIAISQVNKEQVARLLAETQNMLDVLGLDPRAEPWR 403

Query: 402 -------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   + +   +   +++R      K +++AD IR +L + G ++ED        + 
Sbjct: 404 SRNGSAMREVVDALVSIALEQRQAARARKDYATADAIRDRLAAAGIVVEDT------PQG 457

Query: 455 TRWK 458
           TRW+
Sbjct: 458 TRWE 461


>gi|255004163|ref|ZP_05278964.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 466

 Score =  529 bits (1362), Expect = e-148,   Method: Composition-based stats.
 Identities = 196/484 (40%), Positives = 275/484 (56%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSGCVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL       
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSN----- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIID 348
                 VIR   L THYR+P+D+  + + +A+  L+K  +           T      + 
Sbjct: 288 -GVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILG-IEVCKEHL 401
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G      E  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 402 NKNI-----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             ++        I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|163847402|ref|YP_001635446.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222525251|ref|YP_002569722.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163668691|gb|ABY35057.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449130|gb|ACM53396.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 472

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 174/491 (35%), Positives = 246/491 (50%), Gaps = 57/491 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL R++   + I+P  +RMYVCG T YD AHIG+A   IVFDV+ R L +   
Sbjct: 1   MTIQLYNTLSRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDVIRRYLEFRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V ++ N TDIDDK+I RA        +      ++ +   +F+     +  L  T  
Sbjct: 61  E--VRHIVNFTDIDDKVIARANA------LGQDPLTLSGQYAAEFLAQLQAMNVLPATAY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR +  +P +I  +Q +I  G+AY  + ++ F      +YG  S R +DE   GTR    
Sbjct: 113 PRVSTTMPAIIAFVQGLIERGYAYVVDGDVYFRVRRDEDYGKLSGRSLDEMLSGTRFEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++PADF LWK + P EP WESPWG GRPGWHIECSAM+  +LG   DIHGGG DLIF
Sbjct: 173 PRKESPADFALWKAARPGEPSWESPWGPGRPGWHIECSAMAMEHLGPQIDIHGGGTDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNL------EGRKMSKSNGNFITINELLETKK 296
           PHHENEIAQS      +  A  W+HNG L L      +  KMSKS GN +TI + L    
Sbjct: 233 PHHENEIAQSESLTG-QCFARYWVHNGMLQLVNPQTRQVEKMSKSLGNVVTIADFLSR-- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP------ 349
                + A V RL +L + YR P+ +  +   + +  L +     + + G +        
Sbjct: 290 -----YDADVFRLIVLSSSYRSPLTYNDEVAADNQRKLERLLSALAPATGTVHEGPAVTA 344

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASA 389
                       ++A+ ND N+ +A+ AL  L R      D                  A
Sbjct: 345 LREAAALARERFITAMDNDFNSPAALAALFDLVRAINAARDAGLDNDALAIGQQTLRELA 404

Query: 390 HILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +LG  ++  +       +  IE L++ R  L K K+++ AD +R +L   G  LED   
Sbjct: 405 GVLGLRLQPRQRTTGAEATPFIELLIEVRSELRKAKQYALADMVRNRLSDLGVTLED--- 461

Query: 448 PDNGQRMTRWK 458
              G + TRWK
Sbjct: 462 ---GPQGTRWK 469


>gi|163743240|ref|ZP_02150621.1| cysteinyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161383428|gb|EDQ07816.1| cysteinyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 496

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 198/458 (43%), Positives = 270/458 (58%), Gaps = 23/458 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R       I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 35  IKLHNTRTRGKEVLNPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGTD 94

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTY RN TD+DDKI   A   ++      + + +   T +    ++ D   L  L P H
Sbjct: 95  HVTYARNFTDVDDKINATALARKEAGAPGTLEELVQERTEETISWYLADMAELGALEPDH 154

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PRAT +IPQMI +I+ +I  GHAY +    ++F   S  +YG+ S R +D+   G RV 
Sbjct: 155 MPRATAYIPQMIAMIEELIAKGHAYADGAGHVLFSVKSYKDYGALSGRSVDDMIAGARVE 214

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS    G  FDIHGGG DL
Sbjct: 215 VADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGDSFDIHGGGNDL 274

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+ +LL+      +
Sbjct: 275 MFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 328

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYN 357
            +P  VIRL  L THYR+P+D+T ++  EAE  L +W   +T          AV+ AL +
Sbjct: 329 GYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRRWRALTTGINPAPTASVAVIDALSD 388

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
           DLNT  A+  LHKLA     + +       SA +LG+   K     +  + ++S   + L
Sbjct: 389 DLNTAGALAELHKLA-----SAETAADLLTSARLLGLLTDKMGTWSQGEDHDLSHHEKSL 443

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
              R + ++ K F+  D ++  L + G  +   K    
Sbjct: 444 FDARQVAIETKDFAEVDRLKTALIAAGVEVRMSKTGVE 481


>gi|163842948|ref|YP_001627352.1| cysteinyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|187629797|sp|B0CL02|SYC_BRUSI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|163673671|gb|ABY37782.1| cysteinyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 506

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 223/502 (44%), Positives = 293/502 (58%), Gaps = 52/502 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YN L R    F  ID  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6   PQLRLYNMLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D T L  L PT Q
Sbjct: 66  AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGT 177
           PRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +RR +DE   G 
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL------- 227
           RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L       
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245

Query: 228 -------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                     FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305

Query: 281 SNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI ++L         W    +         RL+ML THYREPI++T QRL E+ 
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365

Query: 332 ILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
             L +W      +G   P       AV +AL +DLN+ +AI AL    R++ K  D+  +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421

Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
               A ++G+         ++ I         AI   + ERL  +  K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480

Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
             +G  L+D K+P  G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502


>gi|312964405|ref|ZP_07778699.1| cysteinyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|110614083|gb|ABF02750.1| cysteine tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|312290882|gb|EFR18758.1| cysteinyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|320196999|gb|EFW71618.1| Cysteinyl-tRNA synthetase [Escherichia coli WV_060327]
          Length = 437

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 171/459 (37%), Positives = 246/459 (53%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LR+   +  + YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK--LKYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY 
Sbjct: 58  -----GESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYV 112

Query: 148 AN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+  +++FD  + P YG  SR+ +D+ + G RV     K+NP DF+LWK S   EP W S
Sbjct: 113 ADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDG-QYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + 
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284

Query: 327 LTEAEILLSKWPQ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST- 376
           L +A   L +                    +   + A+ +D NT  A   L  +ARE   
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 377 -KNHDLLPI------FNASAHILGIEVCK--------EHLNKNISIAIEKLVQERLILLK 421
            K  D+             + +LG+   +           + +    IE L+Q+RL   K
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K +++AD  R +L   G +LED      G + T W++K
Sbjct: 405 AKDWAAADAARDRLNEMGIVLED------GPQGTTWRRK 437


>gi|254166931|ref|ZP_04873785.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289596106|ref|YP_003482802.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624541|gb|EDY37102.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289533893|gb|ADD08240.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 455

 Score =  528 bits (1361), Expect = e-148,   Method: Composition-based stats.
 Identities = 179/472 (37%), Positives = 246/472 (52%), Gaps = 39/472 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL  +  EF  +    + +YVCGPT YD+AHIG+ARP I+FD+  R L Y   + 
Sbjct: 1   MKIYDTLSGEKKEFVPVHEGRVGIYVCGPTTYDYAHIGHARPAILFDIFRRFLEYMGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  + NITD+DDKII +A +      +      +     ++++KD   L        P+
Sbjct: 60  -VILISNITDVDDKIINKANE------LGKDPIEMAHYYAREYLKDMDALRVRRANIIPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I LI+ ++  G+AYE+  ++ F      +YG  S RKI++   G RV     
Sbjct: 113 ATRHIEEIINLIKTLVDKGYAYESGGDVYFSVKKFKDYGKLSHRKIEDMLAGARVEVNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS +YLG   DIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKASKPGEPSWQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G +  E  KMSKS GN   I + L       + +PA
Sbjct: 233 HENEIAQSEAATG-KPFSKYWMHVGLVRFEKEKMSKSIGNVFLIKDFL-------KKYPA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKGII 347
            V+RL  L +HYR+P DF+ + + EA  LL K   T                       +
Sbjct: 285 EVLRLMYLNSHYRKPYDFSEKNIEEALPLLEKIWSTYQILKNSAMQEEPSEEVIEEIDSV 344

Query: 348 DPAVLSALYNDLNTVSAIQA---LHKLARESTKNHDLLPI--FNASAHILGIEVCKEHLN 402
              +++AL +D NT  A++        ARE      L  +        I  I    ++  
Sbjct: 345 RKKIIAALEDDFNTREAMKEYLSFINFARELKGGDALAALNFLKEMDEIFDILPRGDNEG 404

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           K  S  IE L+  R    K K +  ADYIR +LE  G  +ED K      ++
Sbjct: 405 KE-SELIELLLNVRNEERKRKNYEIADYIRDELEKIGIKIEDTKEGTKWYKV 455


>gi|71275651|ref|ZP_00651936.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71897805|ref|ZP_00680031.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|170729530|ref|YP_001774963.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|71163542|gb|EAO13259.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71732360|gb|EAO34414.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|167964323|gb|ACA11333.1| Cysteine--tRNA ligase [Xylella fastidiosa M12]
          Length = 467

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 187/486 (38%), Positives = 267/486 (54%), Gaps = 49/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG
Sbjct: 1   MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   A+++   I      S IT +    + +D  +L    P  +
Sbjct: 61  --ALRYARNITDVDDKINTAAQEQGVPI------SAITERFCAAYREDMKKLGVEPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV   
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A IW+HNG LN EG KMSKS GN  T++ L+          
Sbjct: 233 PHHENEIAQSRCAHGSSTFARIWMHNGMLNFEGAKMSKSLGNIETVHGLVTKH------- 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALY 356
           P   +R A+L  HYR+P+D++   + ++   L++   T        ++ II   + +AL 
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRELAAYPARAIIPGNIEAALD 345

Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
           +DLNT  A+  L  LA E+      T +H    +  A   +                   
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPE 405

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +  N++    I+ L+  R    + + F  AD IR QL ++G +LED        + 
Sbjct: 406 AWFSQGTNESDETHIQALIDARSAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 459

Query: 455 TRWKQK 460
            RW ++
Sbjct: 460 VRWMKQ 465


>gi|150399135|ref|YP_001322902.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|166200152|sp|A6UP68|SYC_METVS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150011838|gb|ABR54290.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 475

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 161/478 (33%), Positives = 238/478 (49%), Gaps = 53/478 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT+ +    F+ ++   +++YVCGPTVYD  HIG+ R  + FD++ R L +     
Sbjct: 2   LRIYNTITKSEEVFKTLNNEEVKIYVCGPTVYDETHIGHGRTYVSFDIIRRYLEHIGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA      + +N     I+ K  + F+ D   L        P+
Sbjct: 60  SVKLVINFTDIDDKIINRA------LNLNVTPKKISEKYIEIFLNDMKTLNVKPADIYPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T +IP++I  I  +I  G AY+ ++ + F+     +YG  S   ++      ++  K  
Sbjct: 114 VTENIPEIISFIDKLIEKGFAYKTDSGVYFEIEKFKDYGKLSNINLENLISEDKLESKSE 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN  DF LWK     EP W+SP+G GRPGWHIECS MS  YLG+ FDIHGGG DL FPH
Sbjct: 174 KKNRFDFALWKNKKSGEPYWKSPFGDGRPGWHIECSVMSMKYLGEQFDIHGGGRDLSFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +   N W+H GF+ + G KMSKS GNF+TI+E+        + +  
Sbjct: 234 HENEIAQSSAYSG-KNWVNYWVHTGFVMVNGEKMSKSLGNFVTISEI-------SKKYSP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDP------ 349
            V+RL  +  HY+ PID+T + +  A+  L K      S           + D       
Sbjct: 286 EVLRLFFIQRHYKSPIDYTEESMEHAKASLQKLYNVIESVRIALENPVNSVWDENEAFFY 345

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNASA 389
                       A+ +D N+V+A++ + +++   TK   +            L  F    
Sbjct: 346 NVLKNSKINFYRAMDSDFNSVNALKTVFEVSNSVTKYLSVSKSPNVALLIKTLDFFKNVG 405

Query: 390 HILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            I G+     + + N+     I+ LV  R  L   K + ++D IR  L+  G+ +ED 
Sbjct: 406 EIFGLFEGYFYKSSNVKEESLIKFLVDLRDDLRSKKNYETSDKIRDGLKELGYQIEDS 463


>gi|300691854|ref|YP_003752849.1| cysteine tRNA synthetase (cysteine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
 gi|299078914|emb|CBJ51575.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
          Length = 465

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 179/484 (36%), Positives = 259/484 (53%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T++      +D   L    P H+
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTNRFIAAMHEDADALGVQRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGRLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ+  A+      N W+HNGF+ +   KMSKS GNF TI E+L      
Sbjct: 234 DLQFPHHENEIAQAEGANG-NTFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIID----- 348
            + +   V+R  +L +HYR  ++++   L +A   L++         + +    D     
Sbjct: 287 -KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEADARPDWNEPH 345

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
                 A+ +D NT  A+ AL +LA E  K     L     A A ++G+     H     
Sbjct: 346 GKRFREAMNDDFNTPVAMAALFELASEVNKTRSPALASQLVALAGVMGLLGRDPHAFLQG 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +   +  +E  ++ R      + F+ AD IR  L + G +LED         +T
Sbjct: 406 GVGAAADGLDAAEVEARIEARRAAKAARDFARADSIRADLLAAGIVLEDKPGG-----VT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|114797963|ref|YP_761876.1| cysteinyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|123027646|sp|Q0BXB7|SYC_HYPNA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|114738137|gb|ABI76262.1| cysteinyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 461

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 192/481 (39%), Positives = 270/481 (56%), Gaps = 45/481 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IY+T  RK   F+  D   + +YVCGPTVY++AHIGNARP +VFDVL R+L   YG
Sbjct: 1   MTLRIYDTAARKKRVFEPQDAKRVTLYVCGPTVYNYAHIGNARPPVVFDVLRRVLMARYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  + Y RNITDI+DKII  +      +   + IS IT K    +  D   L  +APT +
Sbjct: 61  EDAIVYARNITDIEDKIIAAS------VASGEPISAITQKYAAIYNADVEALNVIAPTIE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+P+MI +I+ +I   +AY  +  + F   S+P+YG  S RK ++ + G RV   
Sbjct: 115 PWATGHVPEMIEIIEKLIRKKYAYVGDTGVWFSVPSMPDYGRLSGRKPEDNEAGARVAVD 174

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P+DF LWK + P EP    W+SPWGRGRPGWHIECSAM++ +LG+  DIHGGG+D
Sbjct: 175 EDKRDPSDFALWKFAKPGEPEDAIWDSPWGRGRPGWHIECSAMAAKHLGRTIDIHGGGVD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS CA   E  A  W+HNGFL++ G KMSKS GN +T+++LL       
Sbjct: 235 LTFPHHENEIAQSECAHGEE-LARYWMHNGFLDMGGEKMSKSLGNVVTVHDLL------- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLS 353
           ++WP  V+R A+L  HYR  +D+T   L +A+  L +          +      D  VL 
Sbjct: 287 KAWPGEVLRFALLTAHYRAQLDWTEDLLKQAKTTLDRIYGALRRVWEADGGEARDTGVLR 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI---------------EVCK 398
           AL +DL T  A+  L +LA E+    DL     A A+                   +  +
Sbjct: 347 ALEDDLGTPDALAELARLASEANTAADLKDAV-AMANGRANLLAAGKLLGLLTKTPKEWE 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +  + + +  I+  VQ R+     K ++ AD IRK L  +G  + D      G   + W+
Sbjct: 406 QGADTDENSRIDAQVQARVDARVAKDWAEADRIRKALAEEGVEIMD------GPAGSTWR 459

Query: 459 Q 459
           +
Sbjct: 460 R 460


>gi|191639246|ref|YP_001988412.1| cysteinyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|239630171|ref|ZP_04673202.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|187631657|sp|Q035S0|SYC_LACC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558712|sp|B3WA35|SYC_LACCB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|190713548|emb|CAQ67554.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Lactobacillus casei BL23]
 gi|239527783|gb|EEQ66784.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|327383326|gb|AEA54802.1| Cysteinyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386509|gb|AEA57983.1| Cysteinyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 468

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 176/492 (35%), Positives = 253/492 (51%), Gaps = 61/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+ RK   F  + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2   LTLYNTMSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII  A          +A   +  +    F++DTT L     T  PR
Sbjct: 61  -VTYVSNFTDVDDKIINAA------HKTGEAPLDLAQRFIDAFMEDTTALGIEPATAHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           A+  IP +I  +Q++I   +AY  + ++ +      +YG  S + +DE + G        
Sbjct: 114 ASQMIPDIIEFVQDLIDKEYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQD 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P E  WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DL
Sbjct: 174 ELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
            FPHHENEIAQS      ++    W+HNGF+ +  +  KMSKS GNFIT++++ +T    
Sbjct: 234 EFPHHENEIAQSEAKT-DKQFVRYWMHNGFVTIGEDDEKMSKSLGNFITVHDIRKTV--- 289

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
                  V+R  M  T YR PI ++   L  A   L++                    PQ
Sbjct: 290 ----DPQVLRFFMAGTQYRMPIRYSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQ 345

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
            +     +    ++A+ +D+N  + +  L  LA+   +            +DLL  ++A 
Sbjct: 346 ITKQLQTLKDRFVTAMDDDINVQNGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAW 405

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+    +   K++   I+ LV+ R      K F+ +D IR QL ++G ILED    
Sbjct: 406 LQIFGVVFADQ---KSLDADIDALVKARDAARAAKDFAKSDQIRDQLAAQGIILEDT--- 459

Query: 449 DNGQRMTRWKQK 460
               + TRW+++
Sbjct: 460 ---PQGTRWRRQ 468


>gi|147918862|ref|YP_687412.1| cysteinyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110622808|emb|CAJ38086.1| cysteinyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 473

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 167/485 (34%), Positives = 252/485 (51%), Gaps = 48/485 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ YNTL + + +FQ +D   ++MYVCGPTVYD+ H+G+AR  IVFDV+ R L Y   
Sbjct: 4   TSLRFYNTLTQTVEDFQPLDDRKVKMYVCGPTVYDYCHMGHARSYIVFDVIRRHLLYRGY 63

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TD+DDKI++RA++      +N   + ++ K    + +D  RL  +   H 
Sbjct: 64  D--VTYVQNFTDVDDKILKRAKE------LNVDPTELSRKFIAAYFEDIDRLNVMRADHY 115

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPE 181
           PR T  +  +I +I+ ++  G+AYE+   + F    +    G  S +  D  K+G R+  
Sbjct: 116 PRVTEFMDPIIGIIKALVDKGYAYESMGSVYFSIDRMVSEVGVLSHQTYDSLKVGARIEV 175

Query: 182 KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              K+NP DF+LWK + P E   W+SPWG+GRPGWHIEC+AMS   LG+  DIHGGG+DL
Sbjct: 176 DERKRNPMDFVLWKAAKPGESLSWDSPWGKGRPGWHIECTAMSVKLLGEQIDIHGGGMDL 235

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE+EI QS         A  WIHNGFL +   KMSKS GNF  I ++L       +
Sbjct: 236 IFPHHESEILQSEAYTGKVPFAKYWIHNGFLLVNKEKMSKSLGNFFLIRDIL-------Q 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------- 340
            +    +R  +L T+Y+ P+DF+   L EA+  L++   T                    
Sbjct: 289 KYSPETVRFFILNTNYQGPLDFSDAGLEEAKKSLARIQNTVSDITDRAGKTDQKGSDQDI 348

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAH 390
           S             + N+ +T  AI  + +  R   +             +  +++  ++
Sbjct: 349 SALIAESKARFDEHMDNNFSTREAIAEIFEFTRTVNRLLRGSFSADEAKQIAGLYDHFSN 408

Query: 391 ILGIEVCKEHLNKNISIAIEKL-VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           ILGI    E     ++  + KL +  R  + K K + ++D IR +L+  G  LED K   
Sbjct: 409 ILGIRWETEQKEDMLADELMKLIIDIRAAVRKKKDYETSDLIRSRLKDLGITLEDTKEGV 468

Query: 450 NGQRM 454
             +R 
Sbjct: 469 KVKRQ 473


>gi|319898705|ref|YP_004158798.1| Cysteinyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402669|emb|CBI76215.1| Cysteinyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 502

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 221/503 (43%), Positives = 300/503 (59%), Gaps = 51/503 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K++ YNTL RK  +F+ ID + +R+YVCGPTVYD+AHIGNAR +I+FDVL+RLLR+ YGE
Sbjct: 3   KLRFYNTLTRKKEDFKPIDATKVRLYVCGPTVYDYAHIGNARSVIIFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITD+DDKI  +A  ++P + +N+AI  +T   + QF +DT  L CL PT QP
Sbjct: 63  NHVIYARNITDVDDKINAKAALQYPDLELNNAIHQLTEYTSYQFQQDTLALGCLQPTSQP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
           RAT+H+ ++  LI+ ++  G+AY A++ I+F  SS+   P YG F++R +DE + G R+ 
Sbjct: 123 RATDHLEEIRSLIERLLEKGYAYIADDHILFSVSSMGDNPRYGMFAKRSLDEMRAGARID 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYL---------- 227
              +KK   DF+LWK S   EPGW SP G    GRPGWHIECSAMS   L          
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGISVLGRPGWHIECSAMSMAKLLSPYGGGLVC 242

Query: 228 ----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                 +FDIHGGG DLIFPHHENEIAQSC     E+ AN WIHNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGSDLIFPHHENEIAQSCSVFGTERMANFWIHNGFLQVEGKKMSKSLG 302

Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           NFITI  LLE   F           R W    IR +ML THYREP+++T+QRL ++   L
Sbjct: 303 NFITIRSLLENDFFEFANVLSKEVKRIWAGLSIRFSMLQTHYREPLNWTMQRLVKSSSEL 362

Query: 335 SKWPQT-------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
            +W +        S +   +D +++  L ND+NT + I  L K  +E             
Sbjct: 363 YRWYELLRREKYYSDNNQSVDSSLIETLSNDINTSNTITILRKFYKEQN-----AVALAH 417

Query: 388 SAHILGIEVCKEHLNKNIS----------IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               LG+   +    K               I++ + ERL L+  K++++AD IR +L +
Sbjct: 418 GMDFLGLLRQELVKKKECPLFISKMHFDLQFIDQRIAERLCLIHNKEWAAADKIRDELAA 477

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
            G  L+D K+P  G+R+T W+ K
Sbjct: 478 GGIFLKDSKDPQTGERITTWEMK 500


>gi|254294732|ref|YP_003060755.1| cysteinyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254043263|gb|ACT60058.1| cysteinyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 461

 Score =  528 bits (1360), Expect = e-148,   Method: Composition-based stats.
 Identities = 188/475 (39%), Positives = 264/475 (55%), Gaps = 37/475 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IK+ N+L RK   F   D   + MYVCGPTVY +AHIGN RP +VFD+LYRLLR  YG
Sbjct: 1   MDIKLTNSLTRKKEVFIPQDEERVTMYVCGPTVYSYAHIGNFRPPVVFDILYRLLRSKYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           ++ V Y  N+TD+DDKII+ +          + IS IT K T+ +++D+  L  L P  +
Sbjct: 61  DEAVLYASNLTDVDDKIIKASNDS------GEPISAITEKFTKAYLEDSAALNILEPDFR 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P A  HIPQMI +++ +    +AY   + + F   S+ +YG  S R +D+   G RV  +
Sbjct: 115 PTAVAHIPQMIEMMKKLERKKYAYRTESGLWFHVKSMEDYGKLSGRNLDDMLAGARVDVE 174

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++PADF LWK + P EP    W+SPWGRGRPGWHIECSAM    LGK  DIHGGG+D
Sbjct: 175 SEKRDPADFALWKVAKPGEPEDAIWDSPWGRGRPGWHIECSAMIEAVLGKTIDIHGGGID 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS CA   E  A+ W+HNGFL++E  KMSKS GN    +E+L       
Sbjct: 235 LQFPHHENEIAQSECAHG-EIMAHYWLHNGFLDIESEKMSKSIGNVKIPHEML------- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------TSKGIIDPAVLS 353
           +     V+R+A+L   YR+P+D+T   L + +  L +                 D AV+ 
Sbjct: 287 KETHGEVLRMALLSAQYRQPLDWTQALLDQCKATLDRAYGALRRVWDFADIEYEDIAVIH 346

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI-----EVCKE 399
           AL +DLNT  A+  L +++ E+ +  D                +  +LG+     E  ++
Sbjct: 347 ALCDDLNTPQALAELSRISGEANRAADAGDQEAMAQARADLIFAGDMLGLLQLTPEEWEK 406

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
             + + +  I+ LVQ RL     K ++ AD IR +L ++G  + D       +R 
Sbjct: 407 GDDGDDAARIDLLVQARLDARANKDWAEADRIRDELAAEGIEIMDNAGGSTWRRG 461


>gi|229586323|ref|YP_002844824.1| cysteinyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511841|sp|C3PMC1|SYC_RICAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|228021373|gb|ACP53081.1| Cysteinyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 459

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 194/477 (40%), Positives = 274/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L+ W +   +       +    + 
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLNYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPNEWFNSG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    + +LV +RL   K K +  AD IR QL  +  ILED  +       T W+++
Sbjct: 408 VDELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDRPDGT-----TIWRKE 459


>gi|325920178|ref|ZP_08182138.1| cysteinyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325549358|gb|EGD20252.1| cysteinyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 481

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 196/501 (39%), Positives = 266/501 (53%), Gaps = 63/501 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DP++  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPTSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I +GHAY A   ++F  +S  +YG  SRR  DE   G RV 
Sbjct: 113 IEPAATAHIPQIMAMIEQLIANGHAYAAEGHVLFAVASFEHYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGATIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIARH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
             P   +R A+L  HYR+P+D++   + +A+  L +   T      ++            
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAAVETDSGVGPTQPTT 345

Query: 349 --PAVLSALYNDLNTV-----------SAIQALHKLA-----RESTKNHDLLPIFNASAH 390
               V SAL +DLNT             A +ALH LA             L  +  A + 
Sbjct: 346 IPDDVESALDDDLNTPLALAALAKLAKEASRALHDLAPAGGPDSERSGEHLAALRRAKSD 405

Query: 391 ILGIE------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +LG                    +      I  LV+ER    K K F+ AD IRKQL  +
Sbjct: 406 LLGAGLALGLLQQDPAAWFSRGTDAGDDARITTLVEERNAAKKAKDFARADAIRKQLADE 465

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G +LED        +  RWK+
Sbjct: 466 GIVLEDT------PQGVRWKR 480


>gi|15603963|ref|NP_220478.1| cysteinyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226168|sp|Q9ZE62|SYC_RICPR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3860654|emb|CAA14555.1| CYSTEINYL-TRNA SYNTHETASE (cysS) [Rickettsia prowazekii]
 gi|292571677|gb|ADE29592.1| Cysteinyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 457

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 200/475 (42%), Positives = 281/475 (59%), Gaps = 35/475 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+ +YNTL R    F   DP+NI+MYVCGPTVYD  HIGN+R ++V+D+LYR++   +G
Sbjct: 1   MKLHLYNTLTRTKEVFNPQDPANIKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIIIKIFG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +K V YVRNITD+DDKII+RA        +   I+ +T K T++F  +   L C+ PT +
Sbjct: 61  KKAVKYVRNITDVDDKIIDRAEL------LGITINDLTDKVTREFHINMEYLGCMLPTIE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++    G R+   
Sbjct: 115 PKATEHIDVMIEIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEAMFEGVRIENS 174

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             KKNP DF+LWK +   EP    + SPWG GRPGWHIECSAMS  YLG+ FDIHGGG D
Sbjct: 175 KTKKNPQDFVLWKPAKKNEPENINFTSPWGLGRPGWHIECSAMSYKYLGQNFDIHGGGAD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH NEIAQS CA      A  WIHNGFL + G KMSKS GNFIT+ +L++      
Sbjct: 235 LIFPHHTNEIAQSRCAFPSSTYAKYWIHNGFLTVNGSKMSKSLGNFITVRDLMD------ 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSAL 355
           +     V+RL +L +HYR P+D+  + + +A+  L  W +     +  K  +    + +L
Sbjct: 289 KQIQGEVVRLFLLSSHYRRPLDYNDKAIDDAKKTLDYWYRAIEHINVQKVDLPSNFMRSL 348

Query: 356 YNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKNIS 406
           ++D+NT  AI+ ++  A+       E+ +  +   I    A+ +G+  +   E  N+++ 
Sbjct: 349 FDDMNTPLAIKIINDYAKCVFISKTEAERKFNASAII-TCANFIGLMRKTQYEWFNRDVD 407

Query: 407 IA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              I +L+ +RL   K K +  AD IR QL  K  ILED  N      +T W+++
Sbjct: 408 EFYINELINKRLKAKKQKNWLLADKIRNQLLEKKIILEDKSN-----YITIWRKE 457


>gi|238650546|ref|YP_002916398.1| cysteinyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511842|sp|C4K199|SYC_RICPU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|238624644|gb|ACR47350.1| cysteinyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 459

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 195/477 (40%), Positives = 273/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +       +    + 
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    I +LV +RL   K K +  AD IR QL  +  ILED  +       T W+++
Sbjct: 408 VDELYINELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDQPDGT-----TIWRKE 459


>gi|153009938|ref|YP_001371153.1| cysteinyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|187629834|sp|A6X270|SYC_OCHA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151561826|gb|ABS15324.1| cysteinyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 505

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 220/497 (44%), Positives = 289/497 (58%), Gaps = 42/497 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNTL R   EF  +D  N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5   PQLRLYNTLTRMKEEFSPLDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VTY RNITD+DDKI  RA +++P +  N+AI  +T     QF  D T L  L P+ Q
Sbjct: 65  AEHVTYARNITDVDDKINARAARDYPDLAFNEAIRRVTESTNAQFQADVTALGNLQPSVQ 124

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS-----SIPNYGSFSRRKIDEQKMGT 177
           PRAT H+ +M  +I  ++  G AY A + ++F  S       P YG+ +RR +DE   G 
Sbjct: 125 PRATEHMDEMRAMIDRLVKLGVAYVAEDHVLFSPSAMNERKGPRYGALARRSLDEMLAGA 184

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAM------------ 222
           RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAM            
Sbjct: 185 RVDVASYKRDEMDFVLWKPSKEGEPGWSSPAGIAVLGRPGWHIECSAMSMAKLLEPFGGG 244

Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                 L   FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSK
Sbjct: 245 LKCDDPLKNQFDIHGGGIDLVFPHHENEIAQSCCAFGTERMANIWMHNGFLQVEGQKMSK 304

Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           S GNFITI ++L                  W     RL+ML THYREPI++T QRL E+ 
Sbjct: 305 SLGNFITIRDVLNEGLPQLGVWDDVDARDRWIGLAARLSMLQTHYREPINWTAQRLAESA 364

Query: 332 ILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKL--ARESTKNHDLL 382
             L +W      +    P        V+ AL +DLN+ +AI AL K   AR+ T   + +
Sbjct: 365 DELHRWYGLLRDRKFTVPETLTAVGEVVEALSDDLNSWTAITALRKAFKARDITGLGEGM 424

Query: 383 PIFNASA--HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            +        ++  ++      +    AIE  + ERL  +  K ++ AD IR +L  +G 
Sbjct: 425 ALLGLLDPHFVMAEDIPVFAKAEVDHQAIEARIAERLRFINEKNWAEADRIRDELLQEGV 484

Query: 441 ILEDYKNPDNGQRMTRW 457
            L+D K+P  G+R T W
Sbjct: 485 QLKDGKDPATGERTTSW 501


>gi|42520052|ref|NP_965967.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|99036051|ref|ZP_01315087.1| hypothetical protein Wendoof_01000057 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|59798568|sp|Q73IL1|SYC_WOLPM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|42409789|gb|AAS13901.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 457

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 201/475 (42%), Positives = 279/475 (58%), Gaps = 41/475 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFTPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  I++  T+ F +D   + C  PTH+P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESISTYYTKAFHEDMRSINCAEPTHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATKNVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  WIHNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAGSMFAKYWIHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAV 351
                VIR A+L THYR+P+D+T   +++A+  L+K+ + S          S   I    
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDF 347

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE---VCKEHLN 402
           + AL NDLN   A+  LH++A +  K  +      L   F  SA  +G+      K    
Sbjct: 348 IDALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYEKWFAV 407

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 IE+L+  R I  K K + +AD IR QL+  G  + D ++       T W
Sbjct: 408 DVNHQEIERLIDLRKIAKKNKNYDTADKIRDQLKQMGITISDNEDGT-----TTW 457


>gi|15837597|ref|NP_298285.1| cysteinyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|9105929|gb|AAF83805.1|AE003937_9 cysteinyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 474

 Score =  527 bits (1359), Expect = e-147,   Method: Composition-based stats.
 Identities = 185/486 (38%), Positives = 261/486 (53%), Gaps = 49/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG
Sbjct: 8   MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 67

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   A+++   I      S IT +    + +D  +L    P  +
Sbjct: 68  --ALRYARNITDVDDKINTAAQEQGVPI------SAITERFCAAYREDMKKLGVEPPDIE 119

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV   
Sbjct: 120 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 179

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 180 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 239

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++ L+          
Sbjct: 240 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHGLVAKH------- 292

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------VLSALY 356
           P   +R A+L  HYR+P+D++   + ++   L++   T                + +AL 
Sbjct: 293 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPAHPFIPGNIEAALD 352

Query: 357 NDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIE---------------- 395
           +DLNT  A+  L  LA E     +   H       A+   L  E                
Sbjct: 353 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGLALGLLQQTPE 412

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +  N++    I+ L+  R    + + F  AD IR QL ++G +LED          
Sbjct: 413 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PHG 466

Query: 455 TRWKQK 460
            RW ++
Sbjct: 467 VRWMKQ 472


>gi|254523152|ref|ZP_05135207.1| cysteinyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720743|gb|EED39268.1| cysteinyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 458

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 184/477 (38%), Positives = 262/477 (54%), Gaps = 40/477 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++N L R++  F  +DP+   +YVCGPTVY++ HIGNAR  +VF VL  LLR  +G
Sbjct: 1   MTLRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   AR++   I      S IT K    + +D   L  + P  +
Sbjct: 61  --ALRYARNITDVDDKINTAAREQGVPI------STITDKFAAAYREDMAALGVVPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  T H+PQ+I +I+ +I  GHAY A   ++F  +S   YG  SRR  DE   G RV   
Sbjct: 113 PEVTAHMPQIITMIEQLIASGHAYAAEGHVLFAVASFDGYGKLSRRDPDEMLAGARVDVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  A  W+HNG LN  G KMSKS GN   +++L+       R  
Sbjct: 233 PHHENEIAQSECAHGGKIFARFWLHNGMLNFGGAKMSKSLGNIERVHDLV-------RQH 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA-LY 356
           P   +RLA+L  HYR+P+D++   + ++   L +   T      I+     PA + A L 
Sbjct: 286 PPEALRLALLSAHYRQPLDWSDGLIEQSVRTLDRLYGTLRELASIEASAVIPATVEATLD 345

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------------VCKEHLNK 403
           +DLNT  A+  + ++A ++ +  D          +LG                     + 
Sbjct: 346 DDLNTPQALAEVARIAADARRATDPAEQARLKGELLGAGLALGLLQADPAQWFGTAAGDD 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                I+ L+ ER    + + F+ +D IR QL ++G +LED        +  RW +K
Sbjct: 406 GDDARIQGLIDERAAAKQARDFARSDAIRDQLAAEGIVLEDT------PQGVRWSRK 456


>gi|270294934|ref|ZP_06201135.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
 gi|317477932|ref|ZP_07937115.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
 gi|270274181|gb|EFA20042.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
 gi|316905846|gb|EFV27617.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
          Length = 491

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 167/491 (34%), Positives = 240/491 (48%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVAQYYINRYHKAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSVYFDVEKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + E   + W+HN  L + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGEDMVHYWMHNNMLTVNGQKMGKSYGNFITLEEL 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            + T     +++    IR   L  HYR  +DF+ + L  AE  L++          I PA
Sbjct: 298 FKGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGLDKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNAS 388
                           A+ +DLN+   I  L   A+               DL  +    
Sbjct: 358 ATSTIDVKSLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITAEDLKELKETF 417

Query: 389 ----AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++      E         ++ L++ER      K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLQEDNASNEEREAAFGKVVDMLLEERSKAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDGKDGSEWK 488


>gi|269123413|ref|YP_003305990.1| cysteinyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268314739|gb|ACZ01113.1| cysteinyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 457

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 177/470 (37%), Positives = 261/470 (55%), Gaps = 43/470 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  K+ EF  I+   + +YVCGPTVY++ H GN+RP+IVFD L R       E 
Sbjct: 1   MKIYNSLNNKLEEFIPINDKKVGIYVCGPTVYNYIHFGNSRPVIVFDTLARHFINQGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V++V+N TDIDDKII ++ +E      N     I+ K    F++D ++L  L    +P+
Sbjct: 60  -VSFVQNFTDIDDKIINKSIEE------NIPFEEISKKYINAFMEDISKLNILDIVKRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + +IP +I +I+ +I +G+AYE + +++F  +    YG  S +K+ +  +G R+ +   
Sbjct: 113 VSEYIPDIIEMIEVLIYNGYAYERDGDVLFRVNKYLEYGKLSNQKLSDLSVGVRINKDEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK+    EP W +P+  GRPGWHIECSAMS   LG  FDIH GG+DL+FPH
Sbjct: 173 KENPLDFVLWKKKKENEPYWNAPFSEGRPGWHIECSAMSRKLLGDNFDIHAGGIDLLFPH 232

Query: 245 HENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HENE AQS C    +   AN W+HNGFL + G KMSKS GNFIT+ E+L         + 
Sbjct: 233 HENERAQSVCFCNEKSSFANYWMHNGFLEVNGEKMSKSLGNFITLREILND-------YS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------- 349
             V+R  ML THYR+PI+++++ L  ++  L+    T      ID               
Sbjct: 286 GDVVRFFMLSTHYRKPINYSIENLEISKKTLNSIIDTIDRYKQIDVTNNSNNEIKKDIIE 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIF-NASAHILGIEV 396
              A+ SAL +DLNT  AI  +H L +++ K  +         ++ I      ++LGI++
Sbjct: 346 FELAINSALNDDLNTPLAISCIHDLIKKTNKYLNSSIFREITLVVEILEKYIINVLGIKM 405

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            K   +      IE L + R      K ++ +D IR +L   G    D K
Sbjct: 406 EKNKNDMLSESLIELLNKIREDARMNKNYALSDMIRDELLKLGIKTVDGK 455


>gi|198275421|ref|ZP_03207952.1| hypothetical protein BACPLE_01584 [Bacteroides plebeius DSM 17135]
 gi|198271757|gb|EDY96027.1| hypothetical protein BACPLE_01584 [Bacteroides plebeius DSM 17135]
          Length = 493

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 160/491 (32%), Positives = 240/491 (48%), Gaps = 43/491 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ IYNTL RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+++R L +  
Sbjct: 3   NNQLFIYNTLTRKKELFVPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDIVFRYLTHLG 62

Query: 62  GEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD+     D      +    +         +      ++ K    L  L
Sbjct: 63  YK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLLRYHKAMEALNVL 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+  
Sbjct: 121 PPSIEPHASGHIIEQIKLVEEILKNGYAYESKGSVYFDVAKYNKDHHYGVLSGRNLDDVL 180

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ FD
Sbjct: 181 NTTRELDGQDEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRKYLGETFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHE EIAQ+  A    +    W+HN  + + G+KM KS GNFIT++E  
Sbjct: 241 IHGGGMDLVFPHHECEIAQA-VASEGHQMVRYWMHNNMITINGQKMGKSLGNFITLDEFF 299

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA- 350
             + K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +   +   I PA 
Sbjct: 300 TGSNKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGVKNLDRITPAK 359

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
                           A+ +DLNT   I  L    R      D     +A          
Sbjct: 360 ATSGIEPKGLREKCYEAMNDDLNTPIVISHLFDATRMINTVIDKKAAISAEDLEELKSVF 419

Query: 388 ---SAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++   E+     +     ++ L+++R+     K ++++D IR  L + GF 
Sbjct: 420 HLFVFDILGLKAEAENNAAREEAYGKVVDMLLEQRMQAKANKDWATSDKIRDNLAALGFE 479

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 480 VKDTKDGFTWK 490


>gi|160888583|ref|ZP_02069586.1| hypothetical protein BACUNI_01000 [Bacteroides uniformis ATCC 8492]
 gi|156861897|gb|EDO55328.1| hypothetical protein BACUNI_01000 [Bacteroides uniformis ATCC 8492]
          Length = 491

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 167/491 (34%), Positives = 240/491 (48%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVAQYYINRYHKAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSVYFDVEKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + E   + W+HN  L + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGEDMVHYWMHNNMLTVNGQKMGKSYGNFITLEEL 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            + T     +++    IR   L  HYR  +DF+ + L  AE  L++          I PA
Sbjct: 298 FKGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGLDKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNAS 388
                           A+ +DLN+   I  L   A+               DL  +    
Sbjct: 358 ATSTIDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITAEDLKELKETF 417

Query: 389 ----AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++      E         ++ L++ER      K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLQEDNASNEEREAAFGKVVDMLLEERSKAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDGKDGSEWK 488


>gi|86606543|ref|YP_475306.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|109894952|sp|Q2JTF4|SYC_SYNJA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86555085|gb|ABD00043.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 506

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 177/527 (33%), Positives = 246/527 (46%), Gaps = 90/527 (17%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN--------------IRMYVCGPTVYDFAHIGNARPMI 48
             + +YNTL R+   FQ    S               +RMYVCG TVYD  H+G+AR  +
Sbjct: 1   MTLVVYNTLTRRKEVFQPFGGSESISADEAAGGEKPLVRMYVCGVTVYDLCHLGHARTYV 60

Query: 49  VFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
           V+D++ R L        V YV+N TD+DDKI++RA      +   +++  +  +   ++ 
Sbjct: 61  VWDMVRRYLECRGY--RVKYVQNFTDVDDKILKRA------LERGESMQAVAERFIAEYF 112

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-----------EIIFDTS 157
           +D  RL        PRAT  +  M  LIQ++ L G AY   +           ++ +   
Sbjct: 113 QDMDRLNIKRADLYPRATRSLRAMFELIQSLELKGFAYRVRDPLAPQGETPAYDVYYAVR 172

Query: 158 SIPNYGSFSRRKIDEQKMGTRV---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
             P+YG  S RK++E + G       E   K++P DF LWK + P EPG+ESPWG GRPG
Sbjct: 173 KFPDYGQLSGRKLEELEAGASGRVGEEGAGKRDPFDFALWKAAPPSEPGFESPWGWGRPG 232

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECSAM    LG   DIH GG DLIFPHHENE+AQS      +  A  W+HNGF+N+ 
Sbjct: 233 WHIECSAMVRETLGDHIDIHAGGADLIFPHHENELAQSEPITG-KPLAKYWLHNGFVNVN 291

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G+KMSKS GNF T+ + L         +    +RL +L THYR PID T   +  A    
Sbjct: 292 GQKMSKSLGNFTTLRQALAL-------YHPMALRLFLLQTHYRSPIDLTEAAMEAASHGW 344

Query: 335 SKWP----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-- 382
                         Q  +       A  +A+ +D  T  A+    +LA+E  + H+LL  
Sbjct: 345 ETLQKGIHCAQQFGQGGSPDSEAMRAFQTAMDDDFGTPGALALAFELAKELIREHNLLTH 404

Query: 383 ---------------PIFNASAHILGI-------EVCKEHLNKNI-------SIAIEKLV 413
                                   LG           K   N  +          IE+LV
Sbjct: 405 QGHTHLQPHLLRQKGAALLEILATLGFCWPQPAQGSEKAAANGELAKLPPLEDARIEELV 464

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +R    K K F+ AD IR+QL++ G  L D K+       TRW ++
Sbjct: 465 AQRTAARKAKNFAEADRIREQLKALGITLIDQKDGT-----TRWLRQ 506


>gi|260575276|ref|ZP_05843276.1| cysteinyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259022536|gb|EEW25832.1| cysteinyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 480

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 204/480 (42%), Positives = 259/480 (53%), Gaps = 43/480 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            I++YN   R   +F  +D +N+RMYVCGPTVYD AHIGNARP++VFDVL+RLLR+ YGE
Sbjct: 3   GIRLYNGKTRAKEDFTPLDAANVRMYVCGPTVYDRAHIGNARPVVVFDVLFRLLRHVYGE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYVRN TD+DDKI  +A            I  IT +    +  D   L  L PTH+P
Sbjct: 63  GHVTYVRNFTDVDDKINAKAAA------TGRPIRAITDETIAWYHADMDALGALRPTHEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT +I QMI +I  +I  GHAY A   ++FD  S P+YG  S R ID+   G RV    
Sbjct: 117 RATEYIGQMIAMIAGLIASGHAYAAEGHVLFDVRSYPDYGRLSGRSIDDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S    PGW+SPWG GRPGWHIECSAMS   LG  FDIHGGG+DL FP
Sbjct: 177 YKRDPMDFVLWKPSDAATPGWDSPWGYGRPGWHIECSAMSDALLGASFDIHGGGIDLQFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS CA   +  A +W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 237 HHENEVAQSACAHPGQGFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------ID 348
             VIRL  L THY +P+D+T ++  +AE  L  W       G                 D
Sbjct: 291 GEVIRLVYLGTHYSKPMDWTAEKAAQAEATLRDWYLHLHQHGFSADMVRVLKEAGQWKAD 350

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV------------ 396
              +  L NDLNT  AI  LH LA+   +    L  F     +LG               
Sbjct: 351 DEFIGVLSNDLNTSGAIARLHVLAK--NRTAATLAPFAFGLELLGFVNDWSMLAELAHIG 408

Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                H    +   +  L+ ER      + F+ AD IR  L   G  + D     + Q  
Sbjct: 409 VSQSGHHEPWVESVVAGLLFERQEARASRNFAVADRIRDVLTEAGVQVTDVGGVASWQPG 468


>gi|37520420|ref|NP_923797.1| cysteinyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|61216274|sp|Q7NMB5|SYC_GLOVI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|35211414|dbj|BAC88792.1| cysteinyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 482

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 165/497 (33%), Positives = 239/497 (48%), Gaps = 64/497 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+   F  ++   ++MYVCG TVYD+ H+G+ R  +V+D + R L       
Sbjct: 3   LQIYNTLTRRKEPFVPLEAGTVKMYVCGVTVYDYCHLGHGRTYVVWDTVRRYLISRGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N TD+DDKI+ RA+QE         +  +  K    + +D  RL  L     PR
Sbjct: 61  AVTYVQNFTDVDDKILRRAQQE------GTTMEAVAEKYIAAYFEDMDRLNVLRADSYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT  +P++  LI  +   G+AY A  ++ +       YG  S +++ E + G        
Sbjct: 115 ATQTMPEIGALIDRLTSIGYAYPAAGDVYYSVRRFAEYGKLSGKRLAELEAGASERLQDE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   KK+P DF LWK + P EP W+SPWG GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 175 ELARKKDPFDFALWKGAKPGEPAWDSPWGAGRPGWHIECSAMVRKSLGETIDIHAGGEDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLETK 295
            FPHHENEIAQS      +  A  W+HN FLN+        KMSKS GNF T+ +L E  
Sbjct: 235 QFPHHENEIAQSEAVTG-KPLARYWMHNAFLNVVNSSGAEEKMSKSLGNFKTLRDLFEV- 292

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------- 348
                 +P   +RL +L T YR PI F+ +    +E    +  +     G I        
Sbjct: 293 ------FPPMALRLFLLKTSYRNPIAFSAEAFKGSEQNWRELEEVLQLAGWIAGQGRPAT 346

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------P 383
                         A+ +D NT +A+  +  L ++    +                    
Sbjct: 347 DDIESEPWVRRFNEAMDDDFNTAAALAEVIALGKQLAGRYHAAIHGTPLADPARFAREWR 406

Query: 384 IFNASAHILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            F     ILG++  +    ++      IE  +  R    + + ++ AD IRKQL  +G +
Sbjct: 407 TFALLCDILGLKAAEPEARQSALPEAEIEAQIALRRQAREERNWAEADRIRKQLLDQGIV 466

Query: 442 LEDYKNPDNGQRMTRWK 458
           L D+K     ++ T W+
Sbjct: 467 LIDHK-----EKPTTWR 478


>gi|304436605|ref|ZP_07396574.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304370301|gb|EFM23957.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 476

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 168/495 (33%), Positives = 240/495 (48%), Gaps = 61/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L +     
Sbjct: 2   ITVYNTMTRKKEEFHPLREGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLAHKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +E            I+ +    +      L        PR
Sbjct: 60  RVRYIQNFTDVDDKIIHAANRE------GVTWKEISDRYIAAYFTAMDALNVHRADVFPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  +  +I +I+ +I  G+AY     ++ +   +   YG  S R +D+ + G RV    
Sbjct: 114 VSETMDDIIRMIETLIERGYAYVTEAGDVYYSVEAFAPYGCLSGRSLDDMEAGARVEVNE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIFP
Sbjct: 174 TKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIFP 233

Query: 244 HHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  C D   K A  W+HNGF+ ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQADPCIDADIKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KEY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLSA 354
           P  VIR  +L THYR P+DF+ +RL EA+  L++    +     +          A L+A
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLKEAQAALARLKGANDVIDELLKREGTADTAADLAA 346

Query: 355 LYNDL------------NTVSAIQALHKLARESTKNHD---------------LLPIFNA 387
                            NT  AI  +  LA+E  + H                    +  
Sbjct: 347 QAETFLRDFDAAMDDDFNTALAISQMFGLAKEINRYHQEIERGAAFDMAHFRMAAEAYRK 406

Query: 388 SAHILGIEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            A I+GI    E    +       ++ ++  R      K ++ AD IR  L+  G ++ED
Sbjct: 407 MAGIIGIFEQDEAAPADDGLTNAIMDFVISLRQEARAQKNWALADKIRDGLKEAGVLIED 466

Query: 445 YKNPDNGQRMTRWKQ 459
                      RWK+
Sbjct: 467 TPT------GVRWKR 475


>gi|149376716|ref|ZP_01894474.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149358955|gb|EDM47421.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 436

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 168/457 (36%), Positives = 246/457 (53%), Gaps = 47/457 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD+ H+G+AR ++ FDV+ R LR+   +  V YVRNITDIDDKI+ RA +  
Sbjct: 1   MYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGYD--VHYVRNITDIDDKILRRADEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 +  S +T +  +   +D  +L  L+PT +P AT++I  ++ +I  ++  GHAY 
Sbjct: 58  -----GEVYSDLTQRMIKAMHEDEAKLGVLSPTEEPCATDYINDIVAMIHKLVSGGHAYA 112

Query: 148 AN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A+  ++ F   S  +YG  S++K+++   G RV  +  K++PADF+LWK +   E  W S
Sbjct: 113 ADNGDVYFSVESYSDYGKLSKKKLEDLVAGARVDVQEAKRSPADFVLWKAAKEGEVSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAMS+  LG+ FDIHGGG DL+FPHHENEIAQS CA+      N W+
Sbjct: 173 PWGDGRPGWHIECSAMSNRCLGETFDIHGGGPDLLFPHHENEIAQSECANG-HTFVNTWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G + +   KMSKS GNF TI E+ E        +   V+R  ++ +HYR  +D++   
Sbjct: 232 HAGAIRVNKEKMSKSLGNFFTIREIFE-------KYAPEVVRYFLVSSHYRSQVDYSEDN 284

Query: 327 LTEAEILLSKWPQT--------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-- 376
           L EA   L++            + ++   D     A+ +D NT  A   LH +A E    
Sbjct: 285 LAEAGRTLTRLYHALRGLVPAKNVAETEHDQRFAEAMDDDFNTAGATAVLHAVANEINLH 344

Query: 377 -------KNHDLLPIFNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKM 422
                  K ++   +      +LG+               +  +  I  ++Q R    K 
Sbjct: 345 RREGRDEKANEQAAVLVRLGGVLGLLQQDPEAFFQADTGGELSADDIAAMIQARADARKQ 404

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           K F+ AD IR +L  KG IL+D +        T W++
Sbjct: 405 KDFAEADRIRDELADKGVILDDSR------EGTSWRR 435


>gi|325479181|gb|EGC82278.1| cysteine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 472

 Score =  527 bits (1358), Expect = e-147,   Method: Composition-based stats.
 Identities = 166/487 (34%), Positives = 254/487 (52%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF  I+ + I+MYVCGPTVYD+ HIGNARP++VFD   R + +   + 
Sbjct: 1   MKIHNTLTRQKEEFIPINENEIKMYVCGPTVYDYMHIGNARPLVVFDTFRRYMTFKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V YV N TD+DDKII ++  E            +T K  + +++D   L      T  P
Sbjct: 60  -VKYVVNFTDVDDKIINKSIAE------GITTKEVTDKYIKAYMEDAKDLNIDEENTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RV 179
           RAT  +  +I  I+ ++    AYE+  ++ FD S   +YG  S + I++   G       
Sbjct: 113 RATEVMDDIIAFIKGLVDKNMAYESEGDVYFDVSKADDYGKLSGKNIEDLVHGASNRLDT 172

Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +   KK+P DF LWK++    E  W SPWG GRPGWHIECS MS   LG+  DIH GG 
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWSSPWGEGRPGWHIECSTMSKKILGETIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS   +  +  AN W+HNG + ++G KMSKS GNF T++++       
Sbjct: 233 DLEFPHHENEIAQSEGLN-EKTFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
            + +   VIR  +L T+YR+PI+FT + + +A+  L++                      
Sbjct: 285 KKEYDLGVIRFWLLTTNYRQPINFTREIIEQAKASLNRLTNAYFRLEDLITKAEEKAISE 344

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLP----IF 385
                  +        +  + +DLNT  AI  L  +A+          + ++L     ++
Sbjct: 345 EEKNLLENLDKFKENFIEVMDDDLNTADAITVLFDMAKFINTKLSETTSKEVLEKTFDLY 404

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                 LG+   K+ ++ ++   IE+L+++R +  K K F++AD IR  L + G  ++D 
Sbjct: 405 KDLFASLGLVAKKKEVDVDVER-IEELIEKRSLAKKNKDFATADAIRDVLTAMGITIKDT 463

Query: 446 KNPDNGQ 452
           +     +
Sbjct: 464 REGVKWE 470


>gi|238926117|ref|ZP_04657877.1| cysteinyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
 gi|238886007|gb|EEQ49645.1| cysteinyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
          Length = 476

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 168/495 (33%), Positives = 242/495 (48%), Gaps = 61/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNT+ RK  EF  +    + +Y CG T Y+  HIGNARP + +DV+ R L +     
Sbjct: 2   ITVYNTMTRKKEEFHPLREGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLAHKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TD+DDKII  A +E            I+ +    +      L        PR
Sbjct: 60  RVRYIQNFTDVDDKIINAANREDV------TWKEISDRYIAAYFTAMDALNVRRADVFPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  +  +I +I+ +I  G+AY     ++ +   +   YG  S R +D+ + G RV    
Sbjct: 114 VSETMDDIIRMIETLIERGYAYVTETGDVYYSVEAFAPYGCLSGRSLDDMEAGARVEVNA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP W+SPWG+GRPGWHIECSAMS  YLG+ FD HGGG DLIFP
Sbjct: 174 TKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIFP 233

Query: 244 HHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           HHENEIAQ+  C D   K A  W+HNGF+ ++  KMSKS  NF T+ ++L       + +
Sbjct: 234 HHENEIAQADPCIDADVKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KEY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
           P  VIR  +L THYR P+DF+ +RL EA+  L++    +     +               
Sbjct: 287 PGEVIRFFILQTHYRSPLDFSDERLQEAQTALARLKGANEVIDELLKREGTADTAADLAA 346

Query: 348 -DPAVL----SALYNDLNTVSAIQALHKLARESTKNH---------------DLLPIFNA 387
              A L    +A+ +D NT  AI  +  LA+E  + H                    +  
Sbjct: 347 QSEAFLRDFDAAMDDDFNTALAISQMFGLAKEINRYHQEVERGAVFDAAHFRTAAEAYRK 406

Query: 388 SAHILGIEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            A I+GI    +    +       ++ ++  R      K +  AD IR  L+  G ++ED
Sbjct: 407 MAGIIGIFEQDDAAPADDGLTNAVMDFVISLRQEARAEKNWVLADKIRDGLKEAGVLIED 466

Query: 445 YKNPDNGQRMTRWKQ 459
                      RWK+
Sbjct: 467 TPT------GVRWKR 475


>gi|299143767|ref|ZP_07036847.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518252|gb|EFI41991.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 465

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 173/489 (35%), Positives = 248/489 (50%), Gaps = 59/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF+ +    + MY CGPTVY++ H+GNARP+ VFD L R   + Y   
Sbjct: 1   MRLYNTLTRKKEEFKPLKDGLVTMYNCGPTVYNYIHVGNARPLTVFDTLRRY--FIYKGL 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDK+I +A  E         ++ +  +  ++F  D   L      T  P
Sbjct: 59  DVKFVVNFTDIDDKLINKANAE------GITVAEVAERYIKEFKVDANGLHLYDYETLNP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT HI Q+I  IQ +I    AY +  ++ FD +S  +YG  S +K+++   G RV    
Sbjct: 113 RATEHINQIIDFIQILIDKNAAYVSEGDVYFDINSAKDYGKLSHKKLEDLISGARVDVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNPADF LWK     EP W +PWG GRPGWHIECS M+   LG+  DIH GG DL FP
Sbjct: 173 IKKNPADFALWKAKKEGEPYWTAPWGEGRPGWHIECSVMAKTLLGETIDIHSGGEDLQFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS   + +   A  W+HNG + ++  KMSKS GNF T+ E+ E        + 
Sbjct: 233 HHENEIAQSETCNGV-PFAKFWLHNGMITVDNEKMSKSKGNFFTVREVSE-------EFN 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
             V+R  +L  HYR PI+F+ + + + +  L +                           
Sbjct: 285 LEVLRFFLLGCHYRSPINFSREIMEQTKNGLERIYNAKYKLEEFLENCIDREFSDEDKKQ 344

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLAR--------ESTKN--HDLLPIFNASAH 390
                        ++ +D+NT  AI A++ + +        +S K    ++       + 
Sbjct: 345 LGIIADEIKFFEESMEDDINTADAITAIYNIVKFINIELNEDSNKKLVDEIYNTLLRLSK 404

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LGI    E   +NI   +E+L++ER    K K F  AD IR  L SK  ++ED +    
Sbjct: 405 VLGIL---ELERENIDEEVERLIKEREDARKNKDFKRADEIRDILASKNILIEDTRT--- 458

Query: 451 GQRMTRWKQ 459
               T+WK+
Sbjct: 459 ---GTKWKR 464


>gi|68736678|sp|Q9PEN3|SYC_XYLFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 467

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 185/486 (38%), Positives = 261/486 (53%), Gaps = 49/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R++  F+ +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG
Sbjct: 1   MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   A+++   I      S IT +    + +D  +L    P  +
Sbjct: 61  --ALRYARNITDVDDKINTAAQEQGVPI------SAITERFCAAYREDMKKLGVEPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+PQ+I +I+ +I   HAY A   ++F  +S  +YG  SRR  +E   G RV   
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P+DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA      A +W+HNG LN EG KMSKS GN  T++ L+          
Sbjct: 233 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHGLVAKH------- 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------VLSALY 356
           P   +R A+L  HYR+P+D++   + ++   L++   T                + +AL 
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPAHPFIPGNIEAALD 345

Query: 357 NDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGIE---------------- 395
           +DLNT  A+  L  LA E     +   H       A+   L  E                
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGLALGLLQQTPE 405

Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +  N++    I+ L+  R    + + F  AD IR QL ++G +LED          
Sbjct: 406 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PHG 459

Query: 455 TRWKQK 460
            RW ++
Sbjct: 460 VRWMKQ 465


>gi|260433631|ref|ZP_05787602.1| cysteinyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417459|gb|EEX10718.1| cysteinyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 466

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 206/458 (44%), Positives = 269/458 (58%), Gaps = 23/458 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R   EF  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4   IKLHNTRTRTKEEFVPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPE 63

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A   +Q      +   +   + +    ++ D   L  L P  
Sbjct: 64  HVTYVRNFTDVDDKINATALARKQAGAEGTLEQLVQERSDETIGWYLHDMGALGALEPDQ 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVP 180
            PRAT +I QMI +I+++I  GHAYEA   ++F   S  + YG  S R +D+   G RV 
Sbjct: 124 MPRATRYIDQMIAMIEDLIAKGHAYEAEGHVLFAVDSWRDEYGRLSGRSVDDMIAGARVE 183

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKNP DF+LWK S    PGWESPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL
Sbjct: 184 VAPYKKNPMDFVLWKPSDDELPGWESPWGRGRPGWHIECSAMSYELLGESFDIHGGGNDL 243

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS CA    + A  W+HN  L +EG+KMSKS GNF T+++LL+      +
Sbjct: 244 MFPHHENEIAQSKCAHPHGEFARYWLHNEMLQVEGKKMSKSLGNFFTVHDLLD------Q 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYN 357
             P  VIR   L THYR+P+D+T ++  EAE+ L KW   +          PAV+ AL +
Sbjct: 298 GVPGEVIRFVFLQTHYRKPMDWTEKKAREAEVTLRKWRALTAGIEPAASAAPAVIEALAD 357

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-----VCKEHLNKNISIAIEKL 412
           DLNT  A+  LH LA              ASA +LG+         E    ++S   ++L
Sbjct: 358 DLNTAGALAELHHLASVGD-----AAALLASARVLGLLEPDMGAWAETDGVDLSAHADRL 412

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            + R   ++ K FS  D ++    + G  +   K+   
Sbjct: 413 ARVRAEAMQTKDFSEVDRLKAAYLAAGLEVRMSKDGVE 450


>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 473

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 192/488 (39%), Positives = 270/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG--WSV 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YVRNITDIDDKII+RA +        ++I+ +T +  Q   +D   L CL P   PRAT
Sbjct: 64  KYVRNITDIDDKIIKRANEN------GESITQLTDRFIQAMNEDAENLGCLHPDEAPRAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
           ++I QM  +I N++  G AY  AN ++ F       YG  S RK+++ + G   RV  + 
Sbjct: 118 DYIDQMQSMIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI ++++        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMD-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------QTSTSKGIIDPA 350
             VIR  ++ +HYR P++F+   L EA+  LS++              Q  T    +   
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQAYGDTQVDTLDETLLER 349

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN-----HDLLPIFNA----SAHILGI------E 395
             SA+ +D NT  AI  L ++ +E  +       +   I+ A      +ILG+      E
Sbjct: 350 FNSAMRDDFNTAEAIAVLFEVNKELNRAVKEQQAEQAAIYYATLRHLTNILGLVQHNVEE 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE L+Q+R    K K+F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALALSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTIWRR 471


>gi|269217196|ref|ZP_06161050.1| cysteine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269129333|gb|EEZ60418.1| cysteine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 503

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 173/509 (33%), Positives = 248/509 (48%), Gaps = 79/509 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T      +F  ++   IRMYVCGPTVY++ HIGNAR  I FDV+ R L +   
Sbjct: 2   PMIRLYDTQSHAKRDFHPVEEGKIRMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGF 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V+N+TD+DDKII++A +E        + + + ++ T+ F+ D      L P  +
Sbjct: 62  D--VTFVQNVTDVDDKIIKKANEE------GRSAAEVAAEYTEAFIADMHAAGVLDPDIR 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  I  MI L+  ++  GHAYE   ++ F   S P YG+ S R +D+ + G R    
Sbjct: 114 PRATEEIDAMIDLVGRLVDAGHAYEVEGDVYFGVRSFPAYGALSNRNVDDLEGGHRELRA 173

Query: 183 YH------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                   K++  DF +WK + P EP W+SPWG+GRPGWHIECSAMS  YLG   DIHGG
Sbjct: 174 DGQGLEGRKRDELDFAVWKAAKPGEPSWDSPWGKGRPGWHIECSAMSRMYLGLPLDIHGG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS  A   E   N W+H G L +   KMSKS GNF+ + ++L+T  
Sbjct: 234 GSDLVFPHHENEIAQSEAAYG-ETFCNYWMHGGMLQINQEKMSKSLGNFLLLRDVLKTT- 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------- 345
                  A V+R+ ML THYR P+DF  +RL EA   L +                    
Sbjct: 292 ------DARVLRMLMLQTHYRSPLDFNDERLDEAASSLERVENFIDRMDWLVKHPVEGEG 345

Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLAREST--------------KNHD 380
                       +    ++A+ +D NT  A+ AL     +                   D
Sbjct: 346 IGTQAFSVPLQALREGFVAAMDDDFNTAGALGALFSCINDVNAALGTASLGRGDIEAASD 405

Query: 381 LLPIFNASAHILGIEVCKEHLN---------------------KNISIAIEKLVQERLIL 419
                     + GI+V     +                      +   A+E L++ R   
Sbjct: 406 ARDAVVELFGVFGIDVPGRATDAQDAYPAEVVALAREIASFEGDDAQAAVEALLETRAQA 465

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNP 448
              K ++ AD +R  + + GF++ED    
Sbjct: 466 RASKMWAVADAVRDGMGALGFVIEDTPQG 494


>gi|291515561|emb|CBK64771.1| cysteinyl-tRNA synthetase [Alistipes shahii WAL 8301]
          Length = 491

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 165/492 (33%), Positives = 246/492 (50%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  K+ +YNTL R+   F+ + P  + MYVCGPTVY   H+G+ARP + FD+L+R L+  
Sbjct: 1   MDSKLVLYNTLTRRKEVFEPLVPGRVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLKAS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +    T+++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVAHYYTERYHRAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQ 173
             P+ +P A+ HI + I  ++ I+  G+AYEAN  + FD        NYG  S R +D+ 
Sbjct: 119 ETPSIEPYASGHIIEQIEFVKRILADGYAYEANGSVYFDVEKYNAKYNYGRLSGRNLDDI 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K++  DF LWK+++P     W SPWG G PGWH+ECSAMS+ YLG+ F
Sbjct: 179 VANTRELDGQSDKRHSYDFALWKKASPEHIMRWPSPWGEGFPGWHMECSAMSTRYLGERF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQS  A   +  A  W+HN  + + G+KM KS GNFIT+ E 
Sbjct: 239 DIHGGGMDLMFPHHECEIAQSTAALGHDS-ARYWLHNNMMTVNGQKMGKSLGNFITLEEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              +     +++    IR  +L  HYR  +DF+ + L  AE  L +  +   + G I PA
Sbjct: 298 FTGSHPKLSQAYSPMTIRFFVLQAHYRSTLDFSNEALQAAEKGLDRLMKGIETLGKIKPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPI 384
                           A+ +DLN+   I AL    R   +  D                +
Sbjct: 358 EVSTVDPAELETRCAEAMDDDLNSPMVISALFDWVRTINQLADGSQTITAADLAALTATV 417

Query: 385 FNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
              +  ILG+   K     +    ++  +E L+ ERL     K ++++D IR  L + G 
Sbjct: 418 RRYAFDILGLRDEKAAGTASGRDYVTPLVEMLLDERLKARAAKDWAASDRIRDGLTAAGI 477

Query: 441 ILEDYKNPDNGQ 452
            ++D K+  + +
Sbjct: 478 RVKDRKDGTDWE 489


>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 473

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 188/488 (38%), Positives = 269/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWKR+   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKRAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D   +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQGFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKADAIRQSLLEQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|332295578|ref|YP_004437501.1| cysteinyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178681|gb|AEE14370.1| cysteinyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 489

 Score =  527 bits (1357), Expect = e-147,   Method: Composition-based stats.
 Identities = 179/502 (35%), Positives = 255/502 (50%), Gaps = 66/502 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +I +YNTL ++   F  I+   IRMYVCG TVYD+ H+G+ R  +V+DV  RL     
Sbjct: 3   NNQIYLYNTLTKRKELFVPIENKKIRMYVCGVTVYDYCHLGHGRSYVVWDVWKRLFLSQG 62

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V +++N TDIDDKII+R+R+E            +T+K    + +D  +L  L  T 
Sbjct: 63  FE--VFHIQNFTDIDDKIIKRSREEKVDW------KELTNKFIDAYFEDMDKLNVLRATL 114

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            P+AT++I +MI +I  +I  G+AY+A  +I+F      +YG  S + ID+     RV  
Sbjct: 115 YPKATDYIDEMIKIITGLIEKGYAYKAGGDIVFSIKKFKDYGKLSGKSIDDLIENYRVDS 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++P DF+LWK S P EP W+SP+G+GRPGWHIECSAMS  + G  FDIH GG DLI
Sbjct: 175 SSYKESPLDFVLWKTSKPDEPFWDSPFGKGRPGWHIECSAMSLKHFGSPFDIHAGGQDLI 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS      +K  N W+HNGF+ + G KMSKS GNF T+ ++        + 
Sbjct: 235 FPHHENEIAQSEGFTG-KKFVNYWLHNGFVTISGEKMSKSLGNFKTLRDI-------YQQ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
           +   V+RL +L +HYR P+ F ++ L  A+    K                 K       
Sbjct: 287 YDPMVLRLFILSSHYRSPVVFNLENLMAAKEAWDKIKNAIDVCSSFGLIGELKAAPPSNF 346

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFN-------ASAHILGI- 394
           ++AL +DLNT  AI  + +  R               DL    +       +   ILG+ 
Sbjct: 347 IAALCDDLNTPLAISYIFEKVRFINSIVDSYSKSQAADLKNAISFNINEVLSMIEILGLK 406

Query: 395 -----------------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                                  EV  E  ++  +  + KL+  R  L K K + +AD I
Sbjct: 407 YKPDVLFYSKEQLSKEFDSYELTEVNLELFDELTTENMFKLLSFREFLKKKKLYDNADKI 466

Query: 432 RKQLESKGFILEDYKNPDNGQR 453
           R  L  KG +LED       ++
Sbjct: 467 RNFLNKKGIVLEDLPGGIRAKK 488


>gi|167764089|ref|ZP_02436216.1| hypothetical protein BACSTE_02472 [Bacteroides stercoris ATCC
           43183]
 gi|167698205|gb|EDS14784.1| hypothetical protein BACSTE_02472 [Bacteroides stercoris ATCC
           43183]
          Length = 491

 Score =  526 bits (1356), Expect = e-147,   Method: Composition-based stats.
 Identities = 168/491 (34%), Positives = 245/491 (49%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVAQYYINRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   I FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEILENGYAYESEGSIYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWKR+ P     W SPW  G PGWH EC+AM   YLGK F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWSDGFPGWHAECTAMGKKYLGKHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
              + K   +++    IR  +L  HYR  +DF+ + L  AE  L++          I P 
Sbjct: 298 FTGSNKTLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLARLMDAVHGLEKIVPG 357

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNAS 388
                           A+ +DLN+   I  L   AR               DL  +    
Sbjct: 358 KASTVNVKTLRAECYEAMNDDLNSPIVIAHLFDGARMINNIIAGNDTITAEDLKELKETF 417

Query: 389 ----AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++      E         ++ L+ ER+     K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLKEENTSNEEREAAFGKVVDMLLAERIKAKANKDWATSDKIRDELTALGFA 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGCEWK 488


>gi|313157407|gb|EFR56830.1| cysteine--tRNA ligase [Alistipes sp. HGB5]
          Length = 491

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 165/492 (33%), Positives = 249/492 (50%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ +YNTL R+  EF+ + P  + MYVCGPTVY   H+G+ARP + FD+L+R L+  
Sbjct: 1   MESKLVLYNTLTRRKEEFEPLTPGRVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLKAC 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +    T+++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVAHYYTERYHRAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQ 173
             P+ +P A+ HI + I  ++ I+  G AYE+N  + FD        NYG  S R +D+ 
Sbjct: 119 ETPSIEPYASGHIIEQIEFVKKILADGFAYESNGSVYFDVEKYNRKYNYGRLSGRNLDDI 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K++  DF LWK+++P     W SPW  G PGWH+ECSAMS+ YLG+ F
Sbjct: 179 VANTRELDGQSDKRHSYDFALWKKASPEHIMRWPSPWSEGFPGWHMECSAMSTRYLGERF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQS  A   +  A  W+HN  + + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLMFPHHECEIAQSTAALGHDS-ARYWVHNNMITINGQKMGKSLGNFITLEEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              + K   +++    IR  +L   YR  +DF+ + L  AE  L +  +   + G I PA
Sbjct: 298 FTGSHKLLAQAYSPMTIRFFVLQAQYRSTLDFSNEALQAAEKGLDRLMKGVEALGRIKPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------- 389
                          +A+ +DLN+   I AL    R   +  +      A+         
Sbjct: 358 DVSTVNPAELEERCRAAMDDDLNSPMVISALFDWVRVINQLAEGRQTITAADLETLKTTV 417

Query: 390 -----HILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                 ILG+   K   + +    ++  +E L+ ERL     K ++++D IR  L + G 
Sbjct: 418 RRYAFDILGLRDEKAAGSASGRDYVTPLVEMLLDERLKARAAKDWAASDRIRDGLAAAGI 477

Query: 441 ILEDYKNPDNGQ 452
            ++D K+  + +
Sbjct: 478 RVKDRKDGSDWE 489


>gi|17545886|ref|NP_519288.1| cysteinyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|21264003|sp|Q8Y077|SYC_RALSO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|17428181|emb|CAD14869.1| probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 465

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 177/484 (36%), Positives = 255/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYNTL R+   F  I+P  +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRASGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII+RA      +   + I  +T++      +D   L    P  +
Sbjct: 62  D--VTYVRNITDIDDKIIKRA------VENGETIGALTNRFIAAMHEDADALGVQRPDRE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +  +G AY+A + ++ +     P YG  S + +++ + G RV  
Sbjct: 114 PRATEYVPQMLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAMS   LG  FD+HGGG 
Sbjct: 174 NDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCDLLGTHFDLHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A       N W+HNGF+ +   KMSKS GNF TI ++L      
Sbjct: 234 DLQFPHHENEIAQSEGASG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
            + +   V+R  +L +HYR  ++++   L +A   L++             A        
Sbjct: 287 -KVYDPEVVRFFILRSHYRSDLNYSDVHLDDARHALTRLYTALKDVPAEAQARPDWNEPH 345

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
                 A+++D NT  A+  L +LA E  K     L     A   ++G+ V   H     
Sbjct: 346 GKRFREAMHDDFNTPVAMAVLFELATEVNKTRSPALASQLAALGGVMGLLVRDPHAFLQG 405

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +   +  +E  ++ R      + F+ AD IR  L + G +LED         +T
Sbjct: 406 GVGAAADGLDAAEVEARIEARRAAKAARDFARADGIRADLLAAGIVLEDKPGG-----VT 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|221198382|ref|ZP_03571428.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208941|ref|ZP_03581938.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171224|gb|EEE03674.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221182314|gb|EEE14715.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 465

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 179/484 (36%), Positives = 248/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IID------ 348
              + A V+R  ++ THYR P++++   L +A   L++              +D      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWSEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  AI  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        IE  +  R    + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGALSVDEIEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|222475063|ref|YP_002563478.1| cysteinyl-tRNA synthetase (cysS) [Anaplasma marginale str. Florida]
 gi|255003041|ref|ZP_05278005.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|222419199|gb|ACM49222.1| cysteinyl-tRNA synthetase (cysS) [Anaplasma marginale str. Florida]
          Length = 466

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 196/484 (40%), Positives = 275/484 (56%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VVYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL       
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSN----- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIID 348
                 VIR   L THYR+P+D+  + + +A+  L+K  +           T      + 
Sbjct: 288 -GVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILG-IEVCKEHL 401
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G      E  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 402 NKNI-----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             ++        I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|157827987|ref|YP_001494229.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165932680|ref|YP_001649469.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|187631627|sp|B0BW37|SYC_RICRO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187631628|sp|A8GQP6|SYC_RICRS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157800468|gb|ABV75721.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165907767|gb|ABY72063.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 459

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 195/477 (40%), Positives = 273/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ + ++YNTL R    F   D  N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFRLYNTLSRTKEVFNPQDQDNVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +       +    + 
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKSPHEWFNSG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    I +LV +RL   K K +  AD IR QL  +  ILED  +       T W+++
Sbjct: 408 VDELYINELVNKRLEAKKHKNWLLADQIRNQLLEEKIILEDQPDGT-----TIWRKE 459


>gi|157964147|ref|YP_001498971.1| cysteinyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|187630859|sp|A8F0I8|SYC_RICM5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157843923|gb|ABV84424.1| Cysteinyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 459

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 193/477 (40%), Positives = 270/477 (56%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVYD  HIGN R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYDNPHIGNGRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNIT++DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKTVKYVRNITNVDDKIIDRAEL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT H   MI +I+ +I   HAY  +N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHTDVMIAIIERLIAKEHAYVVDNHVYFDVLSAPNYTELSNRSLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFITI +L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITIRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +       +    + 
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    I + V +RL   K K +  AD IR QL  +  ILED  +       T W+++
Sbjct: 408 VDELYINEFVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDQPDGT-----TIWRKE 459


>gi|72160616|ref|YP_288273.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
 gi|109894957|sp|Q47TG4|SYC_THEFY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71914348|gb|AAZ54250.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 466

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 162/488 (33%), Positives = 236/488 (48%), Gaps = 54/488 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T  R++ +F  +    + +Y+CG TV    HIG+ R  + FD+L R L Y   
Sbjct: 1   MSLRFYDTRTRQVRDFVPLREGCVSLYLCGATVQAPPHIGHIRSGVSFDILRRWLMYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V + RN+TDIDDKI+  A  E            ++ +N + F +    L CL PT +
Sbjct: 61  --RVIFCRNVTDIDDKILNVAASEGVQWW------EVSERNYRAFAEAYDTLGCLPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+MI L++ +I  GHAY A     ++ FD +S   YGS S ++++E +     
Sbjct: 113 PRATGHIPEMIELMRRLIDRGHAYVAEDGSGDVYFDVTSYAEYGSLSNQRLEEMRA-AED 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +   K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIHGGG+D
Sbjct: 172 GDARAKRDPRDFALWKGARPGEPSWPTPWGPGRPGWHLECSAMATKYLGPTFDIHGGGVD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQS  A      A  W+HNG L   G KMSKS GN + I E+        
Sbjct: 232 LVFPHHENESAQSRAAGDG--FARYWLHNGLLTTGGEKMSKSLGNSLLIPEI-------T 282

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------DP 349
           R      +R  +   HYR  +D++ + L EA     +          I            
Sbjct: 283 RRVRPVELRYYLGQAHYRSNLDYSEESLREAASAYQRLENFLVRVNEIAGPIPDDVPVPE 342

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEH 400
              +AL +DL    A+   H   RE           +   +     A   +LG++     
Sbjct: 343 EFAAALDDDLGVPQALAVAHNHVREGNSALAEGAKERAAQIGARLRAMLAVLGLDPLSPQ 402

Query: 401 LNKNISIAI--------EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
              +    +          ++++R    K K +++AD IR QL   G  +ED        
Sbjct: 403 WAGSDDSGLHDVVDSLVSVVLEQRQEARKRKDYATADRIRDQLAEMGIAVEDT------P 456

Query: 453 RMTRWKQK 460
           +  RW+ K
Sbjct: 457 QGPRWELK 464


>gi|15892034|ref|NP_359748.1| cysteinyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|21264013|sp|Q92JF6|SYC_RICCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15619152|gb|AAL02649.1| cysteinyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 459

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 194/477 (40%), Positives = 273/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +       +    + 
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    + +LV +RL   K K +  AD IR QL  +  ILED  +       T W+++
Sbjct: 408 VDELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDRPDGT-----TIWRKE 459


>gi|161524376|ref|YP_001579388.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189350869|ref|YP_001946497.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|229558623|sp|A9AHN6|SYC_BURM1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160341805|gb|ABX14891.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189334891|dbj|BAG43961.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 465

 Score =  526 bits (1355), Expect = e-147,   Method: Composition-based stats.
 Identities = 178/484 (36%), Positives = 246/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILGIE 395
               +A+ +D NT  AI  L +LA E  +  D  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        IE  +  R    + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGALSVDEIEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|254994905|ref|ZP_05277095.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
          Length = 466

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 196/484 (40%), Positives = 275/484 (56%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A  E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL       
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSN----- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIID 348
                 VIR   L THYR+P+D+  + + +A+  L+K  +           T      + 
Sbjct: 288 -GVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILG-IEVCKEHL 401
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G      E  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 402 NKNI-----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             ++        I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|329849853|ref|ZP_08264699.1| cysteinyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
 gi|328841764|gb|EGF91334.1| cysteinyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
          Length = 465

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 194/482 (40%), Positives = 264/482 (54%), Gaps = 42/482 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K++I++TL R   EFQ  +P  + +YVCGPTVY +AHIGNARP++VFDVL+RLLR  YG
Sbjct: 1   MKLQIHDTLRRDKVEFQPQNPQRVTLYVCGPTVYSYAHIGNARPVVVFDVLFRLLRTIYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y RNITD+DDKI + A  +   I       +IT+     + +D   L  L PT +
Sbjct: 61  EDHVIYARNITDVDDKINKAAMDQGVEI------DVITNHFADIYNQDMATLGALRPTLE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T+++  ++  I  I+ +GHAY     ++FD  S   YG+ SRR +D+   G RV   
Sbjct: 115 PRVTHNMAAIVDQIAAIVANGHAYAEQGHVLFDVESFKTYGALSRRSVDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+NP DF+LWK S   EP W+SPWG GRPGWHIECSAM    LG   DIHGGG DLIF
Sbjct: 175 PYKRNPQDFVLWKPSKTGEPVWDSPWGPGRPGWHIECSAMIEANLGLPIDIHGGGHDLIF 234

Query: 243 PHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           PHHENEIAQ  CA        + A+ W+HNGFL  +G KMSKS GN   +++L+      
Sbjct: 235 PHHENEIAQGLCAQHAHGHDSEYAHYWMHNGFLTFDGDKMSKSLGNVKLVHDLI------ 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------KWPQTSTSKGIIDPAV 351
            +  P  VIR A+L  HYR P+D+T + + + +  L        K+           PAV
Sbjct: 289 -KQVPGEVIRAALLSAHYRGPLDWTGELIAQTQSRLDGMYGTLRKFAAVPVRDEATPPAV 347

Query: 352 LSALYNDLNTVSAIQALHKLARE------STKNHDLLPIFNASAHILGIEV------CKE 399
           L AL +DLNT  A   L  LA+                   A+  +LG+         K 
Sbjct: 348 LEALSDDLNTPRAFAELSALAKALETAADDAARIAAKSQLLAAGKVLGLLQGDAEAWFKA 407

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +++++++ I+ L+ ER+     K +S AD IRK L+  G  + D            WK 
Sbjct: 408 GVDEDLTVKIDALIAERIAARTAKNWSEADRIRKALDELGVEVMDSAT------GATWKL 461

Query: 460 KP 461
           K 
Sbjct: 462 KA 463


>gi|313904851|ref|ZP_07838223.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470284|gb|EFR65614.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 496

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 177/512 (34%), Positives = 248/512 (48%), Gaps = 80/512 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNT+ + I EF+ I    + MYVCGPTVY+  HIGNARPMIVFD   R + Y     
Sbjct: 3   LRFYNTMTKSIQEFKPIREGEVSMYVCGPTVYNLIHIGNARPMIVFDTARRYMEYKGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E           +I+ +  ++ +KD   +  L  T  P 
Sbjct: 61  RVNYVSNFTDVDDKIIKKANEE------GVTSEVISQRYIKETMKDMADMNVLPATTHPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  MI LI+++   G+AYE N  + F T     YG  S + +D+ + G R   V  
Sbjct: 115 ATEEIGGMIELIRDLQEKGYAYEVNGTVYFRTRKDEKYGKLSHKNLDDLRSGFRDLKVSG 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDL 240
           +  K++P DF+LWK   P EP WESPWG+GRPGWH EC  MS  YL     DIH GG DL
Sbjct: 175 EDQKEDPLDFVLWKPKKPGEPFWESPWGQGRPGWHTECCVMSRKYLHSTTIDIHAGGEDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  C+   E  A+ W+HN FLN++  KMSKS GNF T+ E+       G 
Sbjct: 235 IFPHHENEIAQVECSTGEE-FAHYWLHNAFLNIDNVKMSKSLGNFRTVREI-------GD 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
            +   ++R  ML  HYR  ++F+ + +  A+  L +      + G    A          
Sbjct: 287 HYDLQILRFFMLSAHYRRVLNFSTESMEAAKASLGRIRTAVKTLGDRAKAAAAQDLTDHE 346

Query: 351 --------------------------------------VLSALYNDLNTVSAIQALHKLA 372
                                                    A+ +DLNT  A  A+  L 
Sbjct: 347 RTRLGIDAKGEVIPFEVTADSVTGVLVKPDDMRAFRYDFEQAMDDDLNTADAEAAIFNLV 406

Query: 373 RESTK----------NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
           R +               +         ILG+ V  +   +++   IE+L+ +R    K 
Sbjct: 407 RFANIEVQENSSKAFAEAVKTEIMELCGILGLIV--DVKEEDLDAEIEELIAKRQAARKA 464

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           K F+ AD IR +L +KG  L+D +     +R+
Sbjct: 465 KDFAMADAIRDELLAKGIALKDTREGVKWERI 496


>gi|319900445|ref|YP_004160173.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
 gi|319415476|gb|ADV42587.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
          Length = 491

 Score =  525 bits (1354), Expect = e-147,   Method: Composition-based stats.
 Identities = 167/491 (34%), Positives = 242/491 (49%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVAQYYINRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEIMKNGYAYESEGSVYFDVAKYNKDHQYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  L + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMLTINGQKMGKSYGNFITLEEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T     +++    IR   L  HYR  +DF+ + L  AE  LS+          I PA
Sbjct: 298 FNGTHPLLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLSRLMDAVHGLEKIVPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASA 389
                           A+ +DLN+   I  L   A+              D L       
Sbjct: 358 TTSTIDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITADDLKELEDMF 417

Query: 390 H-----ILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H     ILG++      E         ++ L++ER+     K ++++D IR +L + GF 
Sbjct: 418 HTFCFDILGLKEDNTSNEEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K     +
Sbjct: 478 IKDGKEGCEWK 488


>gi|110598118|ref|ZP_01386396.1| cysteinyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
 gi|110340250|gb|EAT58747.1| cysteinyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
          Length = 481

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 159/497 (31%), Positives = 232/497 (46%), Gaps = 55/497 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYN+L R   +F+ + P  + +YVCGPTVY  +H+G+A+  + FDV+ R LR+   
Sbjct: 1   MSLFIYNSLSRTKEQFEPLHPGFVSIYVCGPTVYGHSHLGHAKSYVSFDVVVRWLRHCGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YV+NITD+     +    E   +            I    T+ F +D  RL  L 
Sbjct: 61  Q--VKYVQNITDVGHLTDDADEGEDKIMKQARLEKTDPMEIAQFYTRSFYEDMDRLGILR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGT 177
           P   P AT HIP+ I LI+ ++  GHAYE N  + F   S P YG  S R  ++ Q+ G 
Sbjct: 119 PNIAPAATAHIPEQIALIERLVETGHAYEVNGNVYFSVESFPGYGRLSGRTDMEAQQSGN 178

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           RV  +  K++ +DF LWK++       W SPWG G PGWH+ECSAMS  YLG+  DIHGG
Sbjct: 179 RVEVRSEKRHTSDFALWKKAEENHLMKWRSPWGTGYPGWHLECSAMSMKYLGETIDIHGG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G++  FPHHE EIAQ+      +     W+HN  + + G KM KS  N + + EL  T  
Sbjct: 239 GMENKFPHHECEIAQAESVTG-KPYVRFWMHNNMVTVNGIKMGKSLKNSVNLKELFST-- 295

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------SK 344
                +   VIR  +L +HYR P+DF+   +  ++  L K  +T              + 
Sbjct: 296 -----FDPIVIRFFILQSHYRSPLDFSDVAIRASQTGLEKLHETYRRLMETNSGSGMFAV 350

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASA--HI 391
                    A+ +D NT  A+  L   A+      D               F A A   +
Sbjct: 351 EPYLDRFNDAMNDDFNTPIAVSVLFDCAKALNTALDRSEGVSETAREEAGKFLAMAGTEV 410

Query: 392 LGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           LGI   +        E   K +   +  +++ R    K K F+ +D +R +L   G  ++
Sbjct: 411 LGILQPRGSSGDKQSEETGKALEGVMALILELRAEARKNKDFALSDKLRDRLLEAGIEIK 470

Query: 444 DYKNPDNGQRMTRWKQK 460
           D K          W  K
Sbjct: 471 DTK------EGATWSVK 481


>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 488

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 176/503 (34%), Positives = 248/503 (49%), Gaps = 68/503 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I ++NTL  +       +P  +R+YVCGPTVY + HIGNAR    FDV+ R LRY  
Sbjct: 3   PSSIALFNTLTMQKEPLVTAEPGVVRLYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRG 62

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YVRN TD+DDKII+ A          +    +  +  + F  DT  L  + P  
Sbjct: 63  Y--RVHYVRNYTDVDDKIIKAA------HETGEEPVALAGRFVKIFQDDTRALHLVEPDV 114

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            P+ + H+P+++ +I+ ++  G AYE+  ++ F  SS P Y   S+RK+D+   G RV  
Sbjct: 115 APKVSEHLPEILRIIETLVAKGVAYESQGDVYFSVSSYPEYAKLSKRKLDDLCAGERVQP 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+ P DF LWK + P EP W+SPWG+GRPGWHIECSAMS+ YLG+ FDIHGG LDLI
Sbjct: 175 GEQKREPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSAKYLGESFDIHGGALDLI 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   +  A  W+H GFL++EG KMSKS GN + + + L         
Sbjct: 235 FPHHENEIAQSEAASG-KPFAKYWMHCGFLDIEGAKMSKSLGNVVRLRDALTRV------ 287

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------S 343
             A  +R   L THYR P+ F+ + + ++E  L  + +T                     
Sbjct: 288 -DAEALRFFFLSTHYRHPLHFSDKAIADSEYRLEYFYETLRKVDERVGGKDFGQGPLHGE 346

Query: 344 KGIIDPAVLSALYNDLNTVSAIQA---LHKLARESTKN-------------HDLLPIFNA 387
            G       +A+ +D N   A+ A   L  L  E T                 L      
Sbjct: 347 PGRFLQEFEAAMDDDFNCPGALGALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRK 406

Query: 388 SAHILGI---EVCKEHLNKNISIA---------IEKLVQERLILLKMKKFSSADYIRKQL 435
            + +LG+   +  +  L +              +E+L+ ER    K K F+ AD +R +L
Sbjct: 407 VSSVLGLFEDDPTQWLLRRRDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSEL 466

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
           + +G  + D          T WK
Sbjct: 467 KGQGVEIMDT------VAGTSWK 483


>gi|194334830|ref|YP_002016690.1| cysteinyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
 gi|194312648|gb|ACF47043.1| cysteinyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
          Length = 481

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 157/490 (32%), Positives = 227/490 (46%), Gaps = 49/490 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYN+L R   EF  +    + MYVCGPTVY  AH+G+A+  + FDV+ + LR+   
Sbjct: 1   MSLWIYNSLNRVKEEFIPLQDGVVTMYVCGPTVYGHAHLGHAKSYVSFDVVAKWLRHSGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V Y++NITD+    DD      +    +         I    T+ + +D  RL    
Sbjct: 61  --RVKYIQNITDVGHLTDDSDEGEDKIARQARKERIDPMEIAQYYTRSYYEDMDRLGIDR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM-GT 177
           P   P AT HIP  + LI  +I  GHAYE N  + F   S   YG  S R  +E +  G 
Sbjct: 119 PNIAPTATGHIPDQVNLISTLIEKGHAYEVNGNVYFSVESFKEYGKLSGRTTEEARQSGG 178

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           RV  +  K++PADF LWK++ P     W+SPWG G PGWH ECSAM+  YLG+  DIHGG
Sbjct: 179 RVETRSEKRHPADFALWKKAEPGHLMKWDSPWGSGYPGWHAECSAMAMKYLGETIDIHGG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G++  FPHHE EIAQS  A   +     W+HN  + + G KM KS GNFI + ++     
Sbjct: 239 GMENKFPHHECEIAQSEAATG-KPYVRYWMHNNMVTVNGTKMGKSLGNFINLKDIF---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------KWPQTSTSKGIID- 348
              + +   VIR  +L +HYR P+DF+   +  +   L        +  Q +   G I+ 
Sbjct: 294 ---KRFAPVVIRFFILQSHYRSPLDFSETAIDASRTGLEKLQDTWTRLQQAAPGSGEIET 350

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNASA-HI 391
                 +  A+ +D NT  AI  L  LA+                    + +F +    +
Sbjct: 351 RPFQERLTEAMNDDFNTPIAIAVLFDLAKAVNTAIAAPSGLNQDSLDRCISLFRSFGEEV 410

Query: 392 LGIEVCKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           LGI                + +   +  L+  R      K +  +D IR +L   G  ++
Sbjct: 411 LGILQNPATEKGKTNNEDEETLDTVMNLLIDIRSRARSGKDYELSDLIRDKLAEAGITMK 470

Query: 444 DYKNPDNGQR 453
           D +      R
Sbjct: 471 DTREGTEWSR 480


>gi|221214717|ref|ZP_03587686.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221165256|gb|EED97733.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 465

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 178/484 (36%), Positives = 246/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIDAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT  IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+   +P    WES +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N W+HNGF+ ++  KMSKS GNF TI E+LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLER---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID 348
              + A V+R  ++ THYR P++++   L +A   L++                      
Sbjct: 289 ---YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEPHA 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASA-----------HILGIE 395
               +A+ +D NT  AI  L +LA E    +N  L       A             L   
Sbjct: 346 QRFAAAMNDDFNTPVAIATLFELAGEVNRTRNASLARQLKQLAGLLGLLGREPRAFLQQA 405

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        IE  +  R    + K ++ AD IR +L   G  LED          T
Sbjct: 406 SGAAQAGALSVDEIEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGS-----T 460

Query: 456 RWKQ 459
            W++
Sbjct: 461 EWRR 464


>gi|319786826|ref|YP_004146301.1| cysteinyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465338|gb|ADV27070.1| cysteinyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 458

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 183/478 (38%), Positives = 263/478 (55%), Gaps = 42/478 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YN+L R++  F  +DP+   MYVCGPTVY++ HIGNAR  +VF VL  LLR  +G
Sbjct: 1   MSLRLYNSLTRQVEAFAPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRHG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC---LAP 119
              + Y RNITD+DDKI   A ++   I      S+IT +    + +D   L      AP
Sbjct: 61  --ALKYARNITDVDDKINAAAAEQGVPI------SVITDRFAAAYREDMAALGVAGDFAP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             +P AT HI QMI + + ++  GHAY A   ++F  +S  +YG  SRR  +E   G RV
Sbjct: 113 DIEPTATGHIAQMIAMCERLVAEGHAYAAEGHVLFSVASFADYGRLSRRDTEEMLAGARV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+  +LG+  DIH GG+D
Sbjct: 173 EVAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAEAHLGQTIDIHAGGID 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN   +++L+       
Sbjct: 233 LQFPHHENEIAQSQCAHGGAPFARYWLHNGMLNFGGAKMSKSLGNIEKVHDLV------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------PAVLS 353
           R+ P   +R A++  HYR+P++++   + ++   L +   T      I+        + +
Sbjct: 286 RAHPPEALRYALISAHYRQPLEWSDALVEQSVRTLDRLYGTLRDLADIEASPVIPAEIEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE------------VCKEHL 401
           AL +DLNT  A+  L ++A E+ K  D        + +LG                   +
Sbjct: 346 ALDDDLNTPLALAELARIAGEARKATDASERARLKSGLLGAGLALGLLQQAPEAWFNRGI 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           + +    I+ LV ER    K + F+ AD +R QL ++G +LED        +  RWK+
Sbjct: 406 SNDDDARIQALVDERGAAKKARDFARADALRDQLAAEGILLEDT------PQGVRWKR 457


>gi|34580931|ref|ZP_00142411.1| cysteinyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262316|gb|EAA25820.1| cysteinyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 459

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 194/477 (40%), Positives = 272/477 (57%), Gaps = 35/477 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVY   HIGN+R  +V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +GEK V YVRNITD+DDKII+RA        +   I  +T K T++F K+   L C+ P+
Sbjct: 61  FGEKAVKYVRNITDVDDKIIDRAAL------LGVTIDELTDKVTKEFHKNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G  V 
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L+     
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMN---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +       +    + 
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348

Query: 354 ALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--EVCKEHLNKN 404
           +L +D+NT  A++ ++  A+       E  +  +   I    A+ +G+  +   E  N  
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFSSKTEEERQLNASAII-TCANFIGLMNKTPHEWFNSG 407

Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +    + +LV +RL   K K +  AD IR QL  +  ILED  +       T W+++
Sbjct: 408 VDELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDRSDGT-----TIWRKE 459


>gi|330993327|ref|ZP_08317262.1| Cysteinyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329759357|gb|EGG75866.1| Cysteinyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 459

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 188/469 (40%), Positives = 261/469 (55%), Gaps = 33/469 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ ++++  R    F  + P N+R+Y CGPTVYD AHIGN R M+  DVL RLLR+ Y 
Sbjct: 11  PRLHLHDSRTRSTVPFVPLAPDNVRVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHLY- 69

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI  RA          ++I+ +T++    F  D   ++ L P  +
Sbjct: 70  -PRVTYVRNITDVDDKINARAHAN------GESIADLTARTIADFHADLAAVSILPPDVE 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI +M  +I  +I  GHAYEA   ++F   + P+YG+ S R  D+   G RV   
Sbjct: 123 PRATHHIGEMQDMIARLIESGHAYEAEGHVLFAVGTYPSYGALSGRTPDDLIAGARVEVA 182

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+F
Sbjct: 183 PYKRDPGDFVLWKPSDDQTPGWDSPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLLF 242

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C       AN W+HN  L + G KMSKS GNF+T+ ++L          
Sbjct: 243 PHHENERAQSMCCHPHGHFANHWVHNAMLLVNGEKMSKSLGNFLTVRDVLRDTPAEALRL 302

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------AVLSALY 356
                        YR  ++FT + L EA  +L ++ +         P      +V+  L 
Sbjct: 303 LLLR-------AQYRSVLNFTREGLDEARQMLDRFYRALEKLDPDQPPVPAPDSVVQVLC 355

Query: 357 NDLNTVSAIQALHKLARES-TKNHDLLPIFNASAHILGI-----EVCKEHLNKNISIAIE 410
           +DLNT  A+  +H LA  + T +        A+ +++G+     E       K     IE
Sbjct: 356 DDLNTPRALAEMHALADAALTGDRVAAAQLKAAGNLIGLLNDTPEAWFRGGAKVDPAHIE 415

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +L++ERL   K + F+ AD IR  L ++G +LED      G + T W+Q
Sbjct: 416 RLIEERLAARKARDFARADEIRNTLAAQGIVLED------GPQGTTWRQ 458


>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 485

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 174/499 (34%), Positives = 243/499 (48%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF   + + + MYVCG T YD  HIG+AR  +VFDVLYR LR+   + 
Sbjct: 1   MRLYNTLARKKQEFVPENGNAVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN TDIDDKII RA +      +    + I  +   +F  D  RL  L    +P+
Sbjct: 60  -VTFIRNFTDIDDKIINRANE------VGKEAAAIAEQFIGEFYVDMDRLGVLRADVEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+MI L   +I   HAY   + ++ F   S   YG  S R IDE + G R+    
Sbjct: 113 CTEHIPEMIALTARLIGQDHAYATPSGDVYFRVRSFAGYGKLSGRNIDELESGARIDPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG GRPGWH+ECSAMS  Y     DIHGGG DL FP
Sbjct: 173 EKQDPLDFALWKAAKPGEPSWESPWGPGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+HNGF+ +   KMSKS GNF TI ++L+        + 
Sbjct: 233 HHENEIAQSEAATG-KPFANFWVHNGFVQINSEKMSKSLGNFFTIRDILD-------KFL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
              +R  +L  HYR P+DF+   L EAE  + +                          +
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFDALEEAEKGIRRIYAALAQADAELAKTSWKKSPFPEEMT 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                I+     A+ +D+NT  A+  +    R + +  +                +    
Sbjct: 345 AELDAIERHWAEAMEDDMNTAGALGHVFSAIRLAGRVTEDKTLRKAEGGRDFLLRIKADM 404

Query: 386 NASAHILGI------EVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSADYIRK 433
            A + +LGI          E  +   + A      ++ L+  R    + K F+ +D IR 
Sbjct: 405 AAWSEVLGIFGRDPAGFLAELRDNRAARAGIDPTRVQALLDARQQARQDKDFAKSDAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L +    ++D        
Sbjct: 465 ELAAMHVEVKDTPQGATWD 483


>gi|319779351|ref|YP_004130264.1| Cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109375|gb|ADU92121.1| Cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 486

 Score =  525 bits (1353), Expect = e-147,   Method: Composition-based stats.
 Identities = 186/499 (37%), Positives = 264/499 (52%), Gaps = 58/499 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY++L R+  E + I+ + IRMYVCG TVYDF H+G+AR ++ FDV+ R LRY   + 
Sbjct: 1   MQIYDSLTRQKQELKPIETNKIRMYVCGITVYDFCHLGHARMLVSFDVICRWLRYKGYQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN+TDIDDKII++A      + +N  ++ IT   T     D   L  L P H+PR
Sbjct: 60  -VNYVRNVTDIDDKIIKKA------VALNKRLNEITQFYTDAMHADERALGVLPPDHEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI  M+ +I  +   G AY++ +N++ F      +YG  S R ID+ + G RV    
Sbjct: 113 ATDHISGMLEIINKLESKGLAYKSKDNDVNFSVRKFDSYGKLSGRSIDDLRSGERVAISE 172

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +   EP    W SP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 173 AKLDPLDFVLWKAAKDSEPEDSKWTSPYGLGRPGWHIECSAMSKELLGLPLDIHGGGPDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------E 293
            FPHHENEIAQS  A  IE  A IW+H G L ++  KMSKS GNF TI + +       +
Sbjct: 233 KFPHHENEIAQSEGAYDIE-LARIWMHCGPLMVDNDKMSKSLGNFKTIRQTVAVGEVSDD 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
           + ++      A ++R  ++  HYR   +FT   L +A+  + +  QT  +    D     
Sbjct: 292 SAEYEFNEREAEMLRFFIVRNHYRSAQNFTPDNLVDAQSAIDRLYQTFGTFDAKDFIESP 351

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGI---- 394
                      ++A+ +D NT  A+  L +L  E    K+ +L  +  A   +LG+    
Sbjct: 352 IDWSNPYAVKFMNAMDDDFNTSLAVSVLFELNTEVNKTKSKELFKLLVALGKLLGLFRVN 411

Query: 395 ---------EVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                       K  ++ +  IA     IE L++ER      K F  AD IR  L++ G 
Sbjct: 412 PRLYFKIPTRYSKTQIDGSGGIAISNNDIEGLIEERKAAKANKDFKKADEIRDYLKATGI 471

Query: 441 ILEDYKNPDNGQRMTRWKQ 459
            LED         +T W++
Sbjct: 472 ELEDKPGG-----ITNWRR 485


>gi|220921630|ref|YP_002496931.1| cysteinyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219946236|gb|ACL56628.1| cysteinyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 460

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 208/482 (43%), Positives = 278/482 (57%), Gaps = 51/482 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R    F  ID  N+RMY CGPTVYD AHIGN RP+IVFD+L+RLLR+ 
Sbjct: 1   MAPLLRLYNTLTRAKEPFAPIDAGNVRMYACGPTVYDAAHIGNGRPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YGE  VTYVRN+TD+DDKI  RA +         +I  +T +    F  D  RL  L P 
Sbjct: 61  YGEGAVTYVRNVTDVDDKINARAAER------GISIRALTDETLAAFHADLRRLGVLMPE 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT HI +M  +I+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGQRPVFIEPRATEHIREMAMMIERLVAAGHAYVAEEHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S P EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMEAGARVDVAPYKRSPLDFVLWKPSKPNEPAWPSPCGIAAPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GG+DL+FPHHENE+AQS C       AN+W+HNGFL +EG KMSKS GNF+
Sbjct: 235 LGETFDIHAGGIDLVFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGDKMSKSLGNFV 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG- 345
           T+ E+L         WP  V+RLAML THYR+PID+T++ L EA   + +W +T    G 
Sbjct: 295 TLREVLAD-------WPGEVVRLAMLRTHYRQPIDWTLRALEEASRTIDRWYETVGDTGP 347

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------- 395
              +  A+  AL +DLNT SA+  LH+L        D      A A ++G          
Sbjct: 348 AAEVPAALRDALLDDLNTPSALGELHRL--------DDPAALKAGAMLMGFLGSTRSARA 399

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +      +E+L+ ER      + ++ +D +R  L + G  L+D K+       T
Sbjct: 400 QAAVAASGVDVATVERLIAERKAARAARNWAESDRLRDALAAMGVTLKDNKDGT-----T 454

Query: 456 RW 457
            W
Sbjct: 455 TW 456


>gi|119358160|ref|YP_912804.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
 gi|119355509|gb|ABL66380.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
          Length = 484

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 159/491 (32%), Positives = 230/491 (46%), Gaps = 49/491 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYN+L +K  +F+++ P  + MYVCGPTVY  AH+G+A+  + FDV+ R LR+   
Sbjct: 1   MSLFIYNSLGKKKEQFESLYPGLVTMYVCGPTVYGHAHLGHAKSYVSFDVVARWLRHIGF 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V YV+NITD+    DD      + E  +         I    T+ F +D  RL    
Sbjct: 61  --RVKYVQNITDVGHLTDDGDDGEDKIERQARTEKTDPMEIAQFYTRSFYEDMDRLGVER 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGT 177
           P   P AT HIP+ I LI+ +I   HAY  N  + F   S P YG  S R   D    G 
Sbjct: 119 PNIAPTATGHIPEQIALIEKLIASEHAYVVNGNVYFSVDSFPGYGKLSGRTDQDAVLSGN 178

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           RV  +  K+NP+DF LWK++ P     W SPWG G PGWH+ECSAM++ YLG   DIHGG
Sbjct: 179 RVQLRSEKRNPSDFALWKKAEPGHMMQWHSPWGSGFPGWHVECSAMATKYLGPTIDIHGG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G++  FPHH+ EIAQS  A   +     W+HN  + + G KM KS  N + + +L     
Sbjct: 239 GMENKFPHHDCEIAQSEAASG-KPFVRYWMHNNMVTVNGTKMGKSLKNSVNLKDLF---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSK 344
              +     VIR  +L +HYR P+D++   +  ++  L K   T              + 
Sbjct: 294 ---KRVDPVVIRFFILQSHYRSPLDYSETAIRASQTGLEKLHDTMRRLLQALPGSGELNI 350

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAH-----I 391
                   SA+ +D NT  AI  L   ++      D         L             +
Sbjct: 351 SAFIDRFESAMNDDFNTPIAISVLFDFSKSLNSALDQECGLSETALDNAKRFLGMYGTTL 410

Query: 392 LGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           LGI   +        E+  K +   I  L+  R    + K +  +D IR +L   G  ++
Sbjct: 411 LGIIPPEAQPLTTGMENGEKTLDEVISILLDMRKEAREQKNYPLSDTIRDRLLEAGIEVK 470

Query: 444 DYKNPDNGQRM 454
           D K+  +  ++
Sbjct: 471 DTKDGASWSKV 481


>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254781675|sp|B8J0S2|SYC_DESDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 483

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 183/499 (36%), Positives = 243/499 (48%), Gaps = 69/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R+  EF  + P  + MYVCG T YD+ HIG+AR  +VFDVL R LR+   + 
Sbjct: 1   MLLYNTLGRQKEEFTPLRPGKVHMYVCGITAYDYCHIGHARSALVFDVLVRQLRHMGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA +E            +       F +D  RL       +PR
Sbjct: 60  -VTFVRNFTDVDDKIINRANKEGLDW------REVAQTYINAFYEDMDRLGVQRADVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++  L   ++  G AY   + ++ F   S P YG  S R +DE   G RV    
Sbjct: 113 ATDHIQEIQDLCAKLVAEGKAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  YL    DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSESYL--PLDIHGGGQDLVFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+         A  W+HNGF+ +   KMSKS GNF TI ++LE       S+ 
Sbjct: 231 HHENEIAQTEAVCHCH-LARYWVHNGFVQVNAEKMSKSLGNFKTIRDILE-------SYL 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------QTS 341
              +R  +L  HYR PIDFT + + EAE  L +                        Q +
Sbjct: 283 PETLRFFLLGKHYRSPIDFTAEGMDEAEKALHRVYTALLETQKALTREKWKKSPLPAQLT 342

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASA 389
                   A+  A+ +DLNT  A+  +    R   +              DLL  F A A
Sbjct: 343 EDWAAQAEALDEAMNDDLNTAQALGHIFTQVRLVNRLLEDKTLRAAEAGRDLLQDFLARA 402

Query: 390 HI----LGIEVCK-EHLNKNISIA-----------IEKLVQERLILLKMKKFSSADYIRK 433
                 LG+   + E    ++              +E L+QER      K F+ +D +R+
Sbjct: 403 EQWNTRLGLFGQQPEAFLADLRRIRAARRNIDIPRVEALLQERQEARANKDFARSDALRQ 462

Query: 434 QLESKGFILEDYKNPDNGQ 452
            L   G  ++D     N  
Sbjct: 463 ALLDLGVSVQDTPEGQNWD 481


>gi|291616610|ref|YP_003519352.1| CysS [Pantoea ananatis LMG 20103]
 gi|291151640|gb|ADD76224.1| CysS [Pantoea ananatis LMG 20103]
          Length = 437

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 172/459 (37%), Positives = 245/459 (53%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LRY   +  V YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFD--VNYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++I  +T++   +   D   L  L P  +PRAT HIP+++ L++ +I  GHAY 
Sbjct: 58  -----GESIETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEIVELVEKLIARGHAYV 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A N +++FD  S  +YG+ SR+ +D+ + G RV     K+NP DF+LWK S   EP W S
Sbjct: 113 AENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKADEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG+GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA       N W+
Sbjct: 173 PWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHDG-PYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS  NF T+ ++L       + + A  +R  ++  HYR  +++    
Sbjct: 232 HSGMVMIDREKMSKSLNNFFTVRDVL-------QHYDAETVRYFLMSGHYRSQLNYGEDN 284

Query: 327 LTEAEILLSKWPQT---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
           L +A   L +             +      +     A+ +D NT  A   L  +ARE  +
Sbjct: 285 LNQARAALERLYTALRHTDRNAVADGGEAFEARFREAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 378 --------NHDLLPIFNASAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLK 421
                    + L       A++LGI   +  +        N      IE+ V+ R     
Sbjct: 345 LKGEDMTAANALAAKLREIANVLGILQQEPEVFLQSSAQGNDEEVAEIERWVKARADARA 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K ++ AD  R +L + G I+ED      G + + W++K
Sbjct: 405 AKDWAQADVARDKLNALGVIVED------GPQGSSWRRK 437


>gi|159903756|ref|YP_001551100.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888932|gb|ABX09146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 516

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 177/515 (34%), Positives = 257/515 (49%), Gaps = 81/515 (15%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+ NTL ++   F  + P+++ +Y CG TVYD  H+G+AR  I +DVL R   +   +  
Sbjct: 21  KLTNTLTQQTEVFNPLKPNHVTIYCCGVTVYDLCHLGHARSYISWDVLRRYFIWQGYK-- 78

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT+V+N TDIDDKII RA +E      N  ++ ++ +N ++F KD   L  L P   PRA
Sbjct: 79  VTFVQNFTDIDDKIISRAAKE------NSTMNEVSERNIKEFHKDMDSLGILRPDRMPRA 132

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VPE 181
           T  I  +  +IQ++   G AY    ++ F     PNYG  S R +  Q++         E
Sbjct: 133 TKCIDGIRSMIQDLEAKGAAYSTEGDVYFAVMRHPNYGKLSGRDLSAQQLNAEGRVTEKE 192

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           K  K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG DL+
Sbjct: 193 KARKQHPFDFALWKSAKDGEPSFSSPWGSGRPGWHIECSAMVLQELGETIDIHLGGADLV 252

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   +K AN W+HNG +N+ G+KMSKS GNF TI  LLE        
Sbjct: 253 FPHHENEIAQSEAATG-KKLANYWLHNGMVNVGGQKMSKSLGNFTTIRSLLE------EG 305

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------ 337
             A  +R  +L  HYR+P+DFT++ L  A                               
Sbjct: 306 VSAMTLRFFILQAHYRKPLDFTLEGLEAASSGWKGLNTAICLGEVNKNILQWPKHPVNKT 365

Query: 338 -------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR----------------- 373
                   +       +    +  + +DLNT +A+  L +LAR                 
Sbjct: 366 TETNSTPTEAREELDHLRQRFIDVMNDDLNTSAAMAVLFELARPLKSIANEIERNPYKQI 425

Query: 374 ---ESTKNHDLLPIFNASAHILGI--EVCKEHLNKNISI----AIEKLVQERLILLKMKK 424
              ++ K +         A++LG+  E+ +E+L++N SI     IE+ +++R    +++ 
Sbjct: 426 PDIKAKKLYARWLTLVELANVLGLQGEMKQENLSRNSSIPNKSVIEEAIKQRSAAKRVRN 485

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +  AD IR  L+ +G  L D         +T W +
Sbjct: 486 YEKADQIRDDLKKQGIELIDKSEG-----VTDWIR 515


>gi|145219092|ref|YP_001129801.1| cysteinyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
 gi|145205256|gb|ABP36299.1| cysteinyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
          Length = 483

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 229/487 (47%), Gaps = 48/487 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYN+L R+   F  + P  + +YVCGPTVY  AH+G+A+  + FDV+ R LR    
Sbjct: 1   MTLAIYNSLGREKQPFTPLHPGMVGIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRQSGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V YV+NITD+    DD      +    +         I    T+ F +D  R+  L 
Sbjct: 61  --RVKYVQNITDVGHLSDDADEGEDKIARQARLEKTDPMEIAQYYTRSFYEDMDRMGVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGT 177
           P   P AT HIP+ I L++ ++  GHAYE N  + F   S P YG  S R  ++  + G 
Sbjct: 119 PNIAPLATGHIPEQIALVEALVKSGHAYEVNGNVYFSVESFPGYGKLSGRTDLEAVQSGA 178

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           RV  +  K+NP+DF LWK++       W SPWG G PGWH+ECSAMS  YLG+  DIHGG
Sbjct: 179 RVGVRSEKRNPSDFALWKKAEESHLMQWSSPWGMGYPGWHLECSAMSMKYLGETIDIHGG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G++  FPHHE EIAQS  A+  +     W+HN  + + G KM KS  N + + E+  T  
Sbjct: 239 GMENRFPHHECEIAQSEAANG-KPYVRYWMHNNMVTVNGTKMGKSLKNAVNLKEIFTT-- 295

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSK 344
                     IR  +L +HYR P+D++   +  +   L K  +T            + + 
Sbjct: 296 -----INPLAIRFFILQSHYRSPLDYSDAAIAASTAGLQKLRETRQRLQGATAGTGAMNV 350

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA--HI 391
                    A+ +D NT  AI AL   A+      D                   A   +
Sbjct: 351 APFRERFREAMDDDFNTPVAIAALFDFAKALNAALDRPEGLDQPSLGAAADLFTMAGVDV 410

Query: 392 LGIE-------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LGI               + +  A++ L++ R      K F+++D IR  L++ G  ++D
Sbjct: 411 LGILEHDSGSIGNGAGDRQRLEGAMKVLMELRSAARSEKDFATSDLIRDGLKAAGIEIKD 470

Query: 445 YKNPDNG 451
            +   + 
Sbjct: 471 TREGASW 477


>gi|83859158|ref|ZP_00952679.1| cysteinyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852605|gb|EAP90458.1| cysteinyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 462

 Score =  525 bits (1352), Expect = e-147,   Method: Composition-based stats.
 Identities = 192/480 (40%), Positives = 257/480 (53%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  RK  +F  ID   + MYVCGPTVY  AHIGN RP + FDVL+RLLR+ YG +
Sbjct: 4   LTLYDTAARKKRDFVPIDADRVTMYVCGPTVYSEAHIGNFRPPVAFDVLFRLLRHIYGSE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKI + A            IS+IT K    + +D+  L    PT +P 
Sbjct: 64  HVVYARNITDVDDKINKAAAD------AGVDISVITDKYAAIYREDSAALNITPPTLEPA 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+PQMI +I+ +I  G AY A   ++F   S   YG  S R +D+   G RV    +
Sbjct: 118 ATAHMPQMIAMIEKLIADGFAYAAEGHVLFSVGSYDKYGKLSGRSLDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+PADF+LWK S P EP WE+P+G GRPGWH+ECSAM    LG+  DIH GG DL+FPH
Sbjct: 178 KKDPADFVLWKPSKPGEPVWEAPFGDGRPGWHLECSAMIEATLGETIDIHAGGGDLVFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA      AN W+HNGFL++   KMSKS GN I  N+LL+    G      
Sbjct: 238 HENEVAQSVCAHAGAPLANYWLHNGFLSMASEKMSKSLGNVIKPNDLLQNGVKG------ 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTSKGIIDPAVLSALYN 357
            VIR A++  HYR P+D+  + L   +         L +    + +      AV+ AL +
Sbjct: 292 EVIRYALMTGHYRAPLDWNAKLLENTQRSMDRLYGVLRRLKGVNAADVAAPEAVMDALLD 351

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-----------------LGIEVCKEH 400
           DLNT  A+ AL ++A  + K         A   +                  G++   E 
Sbjct: 352 DLNTPKALAALFEIAGRANKADSEDAQARAKGELLAAGRLLGLFDQDPDAWFGLDTVDEA 411

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           L       I++L+ ERL   + K F  AD IR+ L +K   ++D      G     W+ K
Sbjct: 412 LR----AEIDQLLAERLAARQAKDFEKADAIREILNAKNVQVDD------GPEGATWRLK 461


>gi|254168458|ref|ZP_04875302.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197622513|gb|EDY35084.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 455

 Score =  524 bits (1351), Expect = e-147,   Method: Composition-based stats.
 Identities = 178/472 (37%), Positives = 248/472 (52%), Gaps = 39/472 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+TL  +  EF  +    + +YVCGPT YD+AHIG+ARP I+FDV  R L Y   + 
Sbjct: 1   MKIYDTLSGEKKEFVPVHEGRVGIYVCGPTTYDYAHIGHARPAILFDVFRRFLEYMGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  + NITD+DDKII +A +      +      +     ++++KD   L        P+
Sbjct: 60  -VILISNITDVDDKIINKANE------LGKDPIEMAHYYAREYLKDMDALRVRRANIIPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI ++I LI+ ++  G+AYE+  ++ F      +YG  S RKI++   G RV     
Sbjct: 113 ATRHIEEIINLIKTLVDKGYAYESGGDVYFSVKKFKDYGKLSHRKIEDMVAGARVEVNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS +YLG   DIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKASKPGEPSWQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  +  W+H G +  E  KMSKS GN   I + L       + +PA
Sbjct: 233 HENEIAQSEAATG-KPFSKYWMHVGLVRFEKEKMSKSIGNVFLIKDFL-------KKYPA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDP-------- 349
            V+RL  L +HYR+P DF+ + + EA  LL K          ++  +G  +         
Sbjct: 285 EVLRLMYLNSHYRKPYDFSEKNIEEALPLLEKIWSTYQILKNSAMQEGPSEEVEKRIEDS 344

Query: 350 --AVLSALYNDLNTVSAIQA---LHKLARESTKNHDLLPI--FNASAHILGIEVCKEHLN 402
              ++++L +D NT  A++        ARE      L  +        I  I    ++  
Sbjct: 345 RKKIIASLEDDFNTREAMKEYLSFINFARELKGGDALAALNFLKEMDEIFDILPRGDNEG 404

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           K     IE L+  R    K K +  ADYIR +LE  G  +ED K      ++
Sbjct: 405 KERE-LIELLLNVRNEERKRKNYEIADYIRNELEKIGIKIEDTKEGTKWYKV 455


>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229558710|sp|B4U9I4|SYC_HYDS0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 488

 Score =  524 bits (1351), Expect = e-147,   Method: Composition-based stats.
 Identities = 171/505 (33%), Positives = 241/505 (47%), Gaps = 74/505 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNTL  ++ EF  I+P  + +Y CG TVYD +H+G+ R +IVFDV  R L        V
Sbjct: 5   LYNTLSAELEEFVPINPPQVNIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEKLGY--RV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +VRN TDIDDKII +A +E      N     I ++   ++  D   +       +PR T
Sbjct: 63  KFVRNFTDIDDKIINKANEE------NKDFMSIANRYIARYYLDMEAINVKPANVEPRVT 116

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            H+ ++I LI  +I  G AYE++ +I F   S  +YG  S+R  +E + G R+     K+
Sbjct: 117 EHMEEIISLISKLIELGKAYESDGDIYFSIDSFKDYGKLSKRSPEELEAGARIEPSLKKR 176

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           NP DF LWK S   EPGWESPW  GRPGWH EC AM   +LG+  DIH GG+DL+FPHHE
Sbjct: 177 NPLDFALWKASKSHEPGWESPWSYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NEIAQ+      +  A  W+HNG + + G+KMSKS GNF+T+ E+          +   V
Sbjct: 237 NEIAQAESITG-KPFARYWMHNGLVTVGGKKMSKSLGNFVTLKEIYT-------KYHPDV 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------------- 347
           +RL +L THYR P+DF+ +++ E +    +          +                   
Sbjct: 289 LRLLVLFTHYRSPLDFSFEKMEETKKAYERLKSAIEDIEPLKAIAKEGKPVVDIDFYSLE 348

Query: 348 ---DPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------LLPIFN 386
                    AL  D NT  AI  +     E  K                     L     
Sbjct: 349 KSTQEQFYKALSEDFNTSLAIAHIFNAVAELNKAKTESFKIGYITPKELEGYLFLANSLK 408

Query: 387 ASA-HILG------IEVCKEHLNKNISIAI-----EKLVQERLILLKMKKFSSADYIRKQ 434
            +   I G      ++   + L    S+ I     E L++ R +  + K F  AD+IR +
Sbjct: 409 QTLKDIFGLLEENTLQNTLKTLEPASSVNISTEFLEILIKARNLAKENKDFKVADFIRDE 468

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L + G  LED K        T WK+
Sbjct: 469 LLNYGIKLEDTKA------GTIWKK 487


>gi|149204784|ref|ZP_01881747.1| cysteinyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149141753|gb|EDM29806.1| cysteinyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 467

 Score =  524 bits (1351), Expect = e-147,   Method: Composition-based stats.
 Identities = 210/459 (45%), Positives = 277/459 (60%), Gaps = 28/459 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R+  EF  +D  N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4   IKLHNTRTRRKEEFTPLDKDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGAE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +         +I  IT++ TQ F+ D   L  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAES------GRSIGEITAETTQWFLDDMAALGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+ +I  GHAYEA   ++F   S    YG  S R +D+   G RV    
Sbjct: 118 ATQYIPQMVAMIEGLIAKGHAYEAEGHVLFAVDSWREGYGKLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 178 YKRNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAHELLGESFDIHGGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    + A +W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 238 HHENEIAQSCCAHPEGEFAKVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPAVLSALYNDLNT 361
             VIR   L THYR+P+D+T ++  EAE  L KW         G +    L+ LY+DLNT
Sbjct: 292 GEVIRFVFLSTHYRKPMDWTAEKAEEAEKTLRKWRGLVQGAETGQVQEIELAPLYDDLNT 351

Query: 362 VSAIQALHKLARESTKNHDLLP------IFNASAHILGI------EVCKEHLNKNISIAI 409
              IQ L  +AR      D          F A+A +LG+      +   +H + ++S   
Sbjct: 352 HGVIQRLRAMARAIELGIDTPEGTVTPGDFLATARMLGLLEDGMGDWIAQHAD-DLSDLS 410

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             L +ER+   + K F+  D ++  L   G  +   K+ 
Sbjct: 411 LTLDKERMKAKQTKDFTIVDALKSALTDAGVEVRMTKDG 449


>gi|237653707|ref|YP_002890021.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|237624954|gb|ACR01644.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 461

 Score =  524 bits (1351), Expect = e-147,   Method: Composition-based stats.
 Identities = 188/481 (39%), Positives = 254/481 (52%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F  I+P  +RMYVCG TVYDF H+G+AR M+VFD++ R LR    + 
Sbjct: 2   LSIYNTLSRSKEAFTPIEPGKVRMYVCGMTVYDFCHLGHARVMVVFDMVARWLRASGLD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII RA++        ++I  +T +      +D   L  L P H+PR
Sbjct: 61  -VTYVRNITDIDDKIIRRAQEN------GESIRQLTDRFIAAMHEDADALGVLRPDHEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++ QM  LI  +   G AY A N ++ +       YG  S + +DE + G RV    
Sbjct: 114 ATDYVAQMQSLISRLEQKGLAYVAGNRDVCYAVRKFDGYGKLSGKSLDELRAGERVDVAQ 173

Query: 184 HKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K +P DF+LWK +    P E  W SPWG GRPGWHIECSAMSS  LG  FDIHGGG+DL
Sbjct: 174 DKNDPLDFVLWKHAKVEEPGEVKWASPWGEGRPGWHIECSAMSSDLLGDHFDIHGGGMDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A       N W+HNGF+ ++  KMSKS GNF TI E+L       +
Sbjct: 234 QFPHHENEIAQSEGAHG-HAFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVL-------Q 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDP 349
            +   V+R  +L  HYR  ++++   L +A   L++      +                 
Sbjct: 286 KYDPEVVRFFILRAHYRSALNYSDAHLEDARNALTRLYTALKNVPVAGEPVVDWSEPFAQ 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILG---------IEVCK 398
            + +A+ +D NT  A+  L +LA E  ++    L     A   +LG         ++   
Sbjct: 346 RLRAAMDDDFNTAEAVAVLFELANEVNRSAAPALAAQLKALGGVLGLLGREPQAFLQAGA 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +   + AIE  + ER    K K F+ AD IR +L   G ILED      G   T W+
Sbjct: 406 PDADGLDADAIEAKIAERAAAKKAKNFAEADRIRAELTEAGVILED------GPGGTTWR 459

Query: 459 Q 459
           +
Sbjct: 460 R 460


>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 473

 Score =  524 bits (1351), Expect = e-147,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 269/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF   +   I +YVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII RA +        ++I  +T++      +D   L C+AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIARANEN------GESIQQLTARFIDAMNEDAANLGCVAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I  ++  G AY A N ++ F+ S    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEATTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  LS++  +  +            ++ + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHNVDE 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + ++        IE L+Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQDALALSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTIWRR 471


>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
          Length = 602

 Score =  524 bits (1351), Expect = e-146,   Method: Composition-based stats.
 Identities = 185/511 (36%), Positives = 263/511 (51%), Gaps = 77/511 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  + I+NT+ +K   F+A +P  + MYVCG T YD++HIG+AR  + FD+LYR L+   
Sbjct: 102 ETDLYIFNTMSKKKELFKAREPGKVGMYVCGVTAYDYSHIGHARVYVTFDILYRYLQRLG 161

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII RA        + +    ++++  ++F  D   L CL P+ 
Sbjct: 162 YE--VKYVRNFTDIDDKIISRAND------LGENPLSLSNRFCKEFQVDMAELNCLPPSV 213

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PR T+HI Q+I +IQ I+ +G+AY   N ++ F     P YG  S RK+D+ + G R+ 
Sbjct: 214 EPRVTDHINQIIEMIQQILRNGYAYVVENGDVYFSVDKYPKYGCLSGRKLDDNRAGERIA 273

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+ +LG  FDIHGGG+DL
Sbjct: 274 VDSRKQNPADFALWKSAKPSEPFWDSPWGPGRPGWHIECSAMSAAHLGYCFDIHGGGVDL 333

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA   +     WIHNGF+ ++  KMSKS GNF TI E+LE       
Sbjct: 334 IFPHHENEIAQS-CASCNDSNVPYWIHNGFVTVDAEKMSKSLGNFFTIREVLE------- 385

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
           S+    +RL +  THYR  ++++  +L  A   L    QT                    
Sbjct: 386 SYHPLALRLFLSGTHYRSQLNYSKSQLENASERLFYIYQTLKDCEECLSGHVRQSIGQPI 445

Query: 347 ----------IDPAVLSALYNDLNTVSAIQALHKLAREST-------------------- 376
                     I  A  S++ NDL+   A+ AL +  +                       
Sbjct: 446 PEDIQKRINNIHNAFSSSMSNDLHIAMALDALSEPLKIMNDLMFTRQGRKQKLRMEFLDS 505

Query: 377 ---KNHDLLPIFNAS----AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSS 427
              K  DLL          + +L +++  + L +       + + +++R      K +S 
Sbjct: 506 LEVKTRDLLSDLGLMSPSYSEVL-LQLKSKALRRAGITEDEVLQAIEKRADARAAKNYSE 564

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +D IR++L   G  L D          T W+
Sbjct: 565 SDRIRRKLAVLGIALMDE------PSGTTWR 589


>gi|332283464|ref|YP_004415375.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330427417|gb|AEC18751.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 483

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 174/495 (35%), Positives = 252/495 (50%), Gaps = 54/495 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R     + ++P  +RMYVCG TVYDF H+G+AR ++ FD++ R LR    + 
Sbjct: 2   LHIYNTLSRAKEPLKTVEPGLVRMYVCGMTVYDFCHLGHARMLVSFDIVQRWLRASGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     +S +TS        D   L   +P  +PR
Sbjct: 61  -VKYVRNITDIDDKIIRRA------VQNGQRMSEVTSFFIDAMHADERALGVASPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+ +M+ +I+ +  +G AY+++  ++ +     P YG  S + +D+ + G RV    
Sbjct: 114 ATEHVGEMLGIIKCLEQNGLAYQSDDGDVNYAVRDFPGYGKLSGKSLDDLRAGERVAVSS 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W S +G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 GKRDPLDFVLWKAAKSDEPDESKWPSNYGLGRPGWHIECSAMSRALLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------- 292
            FPHHENEIAQS  A      A++W+H G L ++  KMSKS GNF TI   +        
Sbjct: 234 KFPHHENEIAQSEGAFGG-TLASVWMHCGPLMVDSDKMSKSLGNFRTIRATISIDANLPA 292

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIID 348
           +   +      A ++R  ++  HYR   ++    L +A+  L +  QT          ID
Sbjct: 293 DQASYSANPREAEMLRFFIVRNHYRSQQNYAPDNLFDAQNALDRLYQTLHNVPAEPVQID 352

Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH 400
                  A  +A+ +D NT  A+ AL +L+ E+ +N       +  A   ILG+      
Sbjct: 353 WNHPAAQAFRAAMDDDFNTSGAVAALFELSSEANRNGSGRSSGLMRALGGILGLLQSDPA 412

Query: 401 L----------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                                S  IE L+++R +  + + F+ AD IRK L+  G  LED
Sbjct: 413 TYLQSPTRYQPGSGSAQAVFASEQIEALIKDRALAKQERNFAQADQIRKTLQEGGIELED 472

Query: 445 YKNPDNGQRMTRWKQ 459
                    +T+W++
Sbjct: 473 KAGG-----VTQWRR 482


>gi|91206096|ref|YP_538451.1| cysteinyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157826471|ref|YP_001495535.1| cysteinyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|109894934|sp|Q1RH02|SYC_RICBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166225304|sp|A8GUK2|SYC_RICB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|91069640|gb|ABE05362.1| Cysteinyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|157801775|gb|ABV78498.1| cysteinyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 458

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 199/475 (41%), Positives = 282/475 (59%), Gaps = 34/475 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I ++NTL +    F+  D +N++MYVCGPTVYD  HIGN+R ++V+D+LYR+L   + 
Sbjct: 1   MQIYLFNTLTQNKELFEPEDQTNVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRILVDIFE 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V YVRNITD+DDKIIERA        +  +I+ +T K T++F  +   L CL PT +
Sbjct: 61  AKSVKYVRNITDVDDKIIERAAN------LGISINELTDKVTKEFHTNMKYLFCLPPTIE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  MI +I+ +I  GHAY A++ + FD    PNY   S RK+++     RV   
Sbjct: 115 PKATQHIDVMIEIIEKLIKSGHAYIADDHVYFDVLLAPNYTELSNRKLEDMFESVRVENS 174

Query: 183 YHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             KK+P DF+LWK + P E     ++SPWG GRPGWHIECSAMS  YLGK FDIHGGG D
Sbjct: 175 KTKKHPQDFVLWKPAKPDEDVHMNFKSPWGLGRPGWHIECSAMSYKYLGKNFDIHGGGAD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH NEIAQS CA      A  W+HNGFL + G KMSKS GNFIT+ +L++      
Sbjct: 235 LIFPHHTNEIAQSKCAFSNSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD------ 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----IDPAVLSA 354
           +     ++RL +L  HYR P+D+  + + +A+  L  W +   +  I     +    + +
Sbjct: 289 KQIKGEIVRLFLLTAHYRRPLDYNDKAIEDAKKTLDYWYRAIQNINIQKIDTLPSDFMQS 348

Query: 355 LYNDLNTVSAIQALHKLARES-TKNHDLLPIFNAS-----AHILGI--EVCKEHLNKNIS 406
           L++D+N+  AI+ ++  A+   T  ++    FNAS     A+ +G+  E   E  NK++ 
Sbjct: 349 LFDDMNSPLAIKIINDYAKAIFTATNEEEKQFNASNLIACANFIGLMNETPHEWFNKDVD 408

Query: 407 IA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              I  L+ ERL   K K +  AD IR +L ++  ILED  N       T W+++
Sbjct: 409 ENYINNLINERLEAKKQKNWGLADQIRNKLLNEKIILEDKPNGT-----TIWRKE 458


>gi|194335476|ref|YP_002017270.1| cysteinyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194307953|gb|ACF42653.1| cysteinyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 484

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 163/490 (33%), Positives = 234/490 (47%), Gaps = 49/490 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYN+L R   +F+ + P  + MYVCGPTVY  AH+G+A+  + FDV+ R LR+   
Sbjct: 1   MSLFIYNSLGRTKEKFEPLHPPIVTMYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHSGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V YV+NITD+    DD      +    ++        I+   T+ F +D  +L  L 
Sbjct: 61  --RVKYVQNITDVGHLTDDADEGEDKISKQALLEKTDPMEISQFYTRSFYEDMDKLEVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGT 177
           P   P AT HIP+ I LI+ +I  GHAYE +  + F   S P YG  S R   +  + G 
Sbjct: 119 PNIAPAATAHIPEQIELIERLIDAGHAYEVHGNVYFSVESFPGYGKLSGRTDQEAVQSGI 178

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           RV  +  K++P+DF LWK++       W SPW  G PGWH+ECSAMS  YLG+  DIHGG
Sbjct: 179 RVGVRSEKQHPSDFALWKKAEEGHLMKWNSPWSIGYPGWHLECSAMSMKYLGETIDIHGG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G++  FPHH+ EIAQS      +     W+HN  + + G KM KS  NFI + +L     
Sbjct: 239 GMENKFPHHDCEIAQSESVTG-KPYVRFWMHNNMVTVNGIKMGKSLKNFINLKDLF---- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDP 349
               S+   VIR  +L +HYR P+DF+   +  ++  L K  +T           G  D 
Sbjct: 294 ---LSFDPMVIRFFILQSHYRSPLDFSDAAIRASQTGLEKLRETQRRLREQTPGSGDFDT 350

Query: 350 A-----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF--------NASAHILGIEV 396
           A        A+ +D NT  AI  L  L++      D              A   + G E+
Sbjct: 351 APFIQRFTEAMDDDFNTPIAISVLFDLSKSINAALDRTESISELPQQEAAAFLDLAGREI 410

Query: 397 C-------------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                         +E   K +   ++ L+  R    K K F+ +D IR QL   G  ++
Sbjct: 411 LCILQHDNQSGSRNEELNGKRLDGVMDILLDLRAEARKSKDFALSDKIRDQLLVAGIEIK 470

Query: 444 DYKNPDNGQR 453
           D K   +  +
Sbjct: 471 DTKEGASWSK 480


>gi|114768989|ref|ZP_01446615.1| cysteinyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114549906|gb|EAU52787.1| cysteinyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 455

 Score =  524 bits (1350), Expect = e-146,   Method: Composition-based stats.
 Identities = 200/454 (44%), Positives = 271/454 (59%), Gaps = 25/454 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IK+YN   R    F+ ID  N+RMYVCGPTVYD AHIGNARP++VFD+LYRLLR+ YG
Sbjct: 1   MSIKLYNVKNRTKEAFKPIDERNVRMYVCGPTVYDRAHIGNARPVVVFDILYRLLRHTYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V+Y RN TD+DDKI  +A      I    +I  IT++    +++D T L  L P + 
Sbjct: 61  INSVSYARNFTDVDDKINIKA------ISTGKSIREITNETINWYIEDMTALGALEPDYA 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT +I +MI +   +I  GHAY A   ++FD SS   YG  S R ID+   G RV   
Sbjct: 115 PRATEYISEMIEMSSELIKKGHAYVAEGHVLFDVSSYEAYGELSGRSIDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+NP DF+LWK S   +PGWESPWG GRPGWHIECSAM+    G+ FDIHGGGLDL F
Sbjct: 175 PYKRNPMDFVLWKPSNNDQPGWESPWGFGRPGWHIECSAMARALFGEKFDIHGGGLDLQF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSC     +  AN+W+HN  L +EG+KMSKS GNF ++ ELL+      + +
Sbjct: 235 PHHENEIAQSCACCGQDSFANVWLHNEMLQVEGKKMSKSLGNFFSVKELLD------KGF 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLSALYNDL 359
              V+R   L THY +P+D+TV++  EAE+ L KW + +    +   I   V+ AL +DL
Sbjct: 289 SGEVVRFVYLSTHYSKPMDWTVKKAEEAELTLRKWRKLTNGVQVTKHISKGVIDALNDDL 348

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKLVQ 414
           NT  A+  LH LA+        +    +SA ILG+   +     +    ++S   E ++ 
Sbjct: 349 NTSKALTVLHGLAKSGN-----IEELKSSAQILGLLSDQMGAWVKENTFDLSKLEEIILA 403

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            R   +K K+F+  D ++    S G  ++  K+ 
Sbjct: 404 SRDKAMKTKEFTELDNLKNLFISAGLDVQMSKDG 437


>gi|296534285|ref|ZP_06896763.1| cysteine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296265401|gb|EFH11548.1| cysteine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 476

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 205/494 (41%), Positives = 275/494 (55%), Gaps = 57/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++  +N+  R+   F  +DP ++R+YVCGPTVYD AH+GNARP++VFDVL RLLR  + 
Sbjct: 2   TELAFHNSATRQREIFTPLDPQHVRLYVCGPTVYDLAHLGNARPVVVFDVLARLLRRRF- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI  R+++        + I+ IT++ T  F +D   L CL P  +
Sbjct: 61  -PRVTYVRNITDVDDKINARSQES------GEPIAAITARTTADFHRDMAALGCLPPDEE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT++I QMI LI+ +I +GHAY A   ++F  SS P YG+ S R  DE   G RV   
Sbjct: 114 PRATDNIAQMIQLIERLIANGHAYAAEGHVLFSVSSFPGYGALSGRSPDEMLAGARVEIA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+   DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS  YLG  FDIHGGG DLIF
Sbjct: 174 PYKREAGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSWRYLGTDFDIHGGGHDLIF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA    + A  W+HNG L ++G KMSKS GNF+T+ ++L     G  +W
Sbjct: 234 PHHENEVAQSVCAFPGSRFARTWLHNGMLLVDGEKMSKSLGNFLTVRDIL-----GRGAW 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIIDPAVLSAL---- 355
                RL +L THYR  +D+TV+RL EA+  L  +             D A+++ +    
Sbjct: 289 AGEAFRLLLLKTHYRAALDYTVERLEEAKAELDDFYALLARDLPQPEADDALVAEMAEWA 348

Query: 356 ----YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL---------- 401
                +DLNT  AI  L  L R       +        H +G +   +            
Sbjct: 349 LEPLADDLNTPLAIARLRDL-RTLENVATVGGSATTVLHRIGRDWQPDSGQAAAALRQAA 407

Query: 402 ----------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                            +  S AIE  +Q RL   K K ++ AD IR  L ++G +LED 
Sbjct: 408 ALLGLLGGDARAWRQGGEGDSAAIEAAIQARLDARKAKNWAEADRIRADLLAQGIVLED- 466

Query: 446 KNPDNGQRMTRWKQ 459
                G   T W++
Sbjct: 467 -----GAGGTTWRR 475


>gi|311896844|dbj|BAJ29252.1| putative cysteinyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 464

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 167/482 (34%), Positives = 255/482 (52%), Gaps = 50/482 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T+ R++ +F  + P  + +Y+CG TV    HIG+ R  + FDV+ R  RY   
Sbjct: 1   MSLRLYDTMTRQVRDFVPLVPGCVSIYLCGATVQAPPHIGHIRSGLNFDVMQRWFRYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDK+I + R++            I S N + F +    L CL P+ +
Sbjct: 61  D--VTFVRNVTDIDDKVIAKGREQSTDWWK------IASANERAFSEGYAALGCLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P+MI +++ +I  GHAY A+  + F  ++ P+Y   S ++++  +       +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYAADGNVYFAVTTFPDYLELSNQELENLRQPAG-DNE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGRAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  AN W+HN ++ L G KMSKS GN + ++E++       R W
Sbjct: 232 PHHENEIAQSRAY--GDDFANFWVHNAWVTLAGEKMSKSLGNSVLVSEMV-------RRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------PAVL 352
              V+R  +   HYR  I+++ + L EAE   ++      +     G +D      PA  
Sbjct: 283 RPIVLRYYLAGPHYRSMIEYSEESLREAETGFARIEGFIERAVERCGPVDPAPEVPPAFA 342

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
            A+ +DL    A+  +H   R+                L    A   +LG++   E    
Sbjct: 343 EAMDDDLGVPQALAVVHTAVRQGNSALGADDKESTAARLAEVRAMLGVLGLDPLDEQWAD 402

Query: 404 N----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                      +   +  ++++R      K F++AD IR QL + G  +ED     +G R
Sbjct: 403 GAGQGEELTGVVDALVRLVLEQRQAARARKDFATADAIRDQLGAAGLAVEDTP---SGPR 459

Query: 454 MT 455
            T
Sbjct: 460 WT 461


>gi|15643482|ref|NP_228528.1| cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6831684|sp|Q9WZH8|SYC_THEMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4981244|gb|AAD35801.1|AE001743_3 cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 460

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 164/472 (34%), Positives = 240/472 (50%), Gaps = 42/472 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  I P  +RMYVCGPTVYD  H+GNARP +VFDV  R L Y     
Sbjct: 1   MRITNTLTGKKEEFVPIQPGVVRMYVCGPTVYDLIHVGNARPALVFDVFRRYLEYRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TDIDDKII +A Q      +      +      ++ +D   L        PR
Sbjct: 59  RVIMVQNFTDIDDKIINKANQ------LGVDYKTVADTFIAEYWRDAHALGIRPANFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  ++ +I+ ++  G AY+    + FD      YG  S++KI++   G RV     
Sbjct: 113 TTDFVEDIVEIIEKLVEKGFAYQTETGVYFDVRKFEKYGELSKKKIEDLIAGARVEVDET 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK++ P EP W+SPWG GRPGWHIEC+ MS   LG+ FDIH GG DL+FPH
Sbjct: 173 KKSPLDFSLWKKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A  W+HNG +   G KMSKS GN  T+ E +       + +  
Sbjct: 233 HENEKAQAEALTG-KVFARYWMHNGMVRFLGDKMSKSTGNIFTVREAV-------KRYGR 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDP 349
             +R  +L  HYR P+DF+ + L +    + +                P+ +        
Sbjct: 285 DGLRYMILSKHYRSPMDFSEELLQDYSRAVKRVWEILGRYEKSGDIGIPKRNAVYEEYVN 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------ILGI-EVCK 398
             + AL +D NT  A+  + +LAR  +K  D     +A  +          +LG+ ++ +
Sbjct: 345 RFVEALDDDFNTPVAVSLIFELARNLSKAMDDNDREDALLYYHLIRREFGPVLGLFDLNE 404

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           E    +    ++ L++ R +L K K++  +D IR +L   G IL+D  +   
Sbjct: 405 EKKEVSSEELLKLLIEVRDVLRKEKRYDLSDRIRDRLREIGIILKDTPSGTE 456


>gi|333029518|ref|ZP_08457579.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
 gi|332740115|gb|EGJ70597.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
          Length = 491

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 163/491 (33%), Positives = 240/491 (48%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++ IYNTL RK   F  +   ++ +YVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MDHQLTIYNTLSRKKELFVPLHAPHVGLYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ KD   L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEELEPMEVVQYYLNRYHKDMEELNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LPPSIEPHASGHIIEQIQLVKEILKNGYAYESQGSVYFDVAKYDKKYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK + P     W SPW  G PGWH EC+AM   YLG  F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKAAQPEHIMRWPSPWSDGFPGWHCECTAMGRKYLGNHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A +     + W+HN  + + G KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGNDMVHYWMHNNMITVNGTKMGKSLGNFITLEQF 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---- 346
            + + +   +++    IR  +L  HYR  +DF+ + L  +E  L +              
Sbjct: 298 FDGSHELLLQAYSPMTIRFFILQAHYRSTVDFSNEALIASEKGLERLFDAVHRLDALKVS 357

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                    +    + A+ +DLNT   I  L   A+                  +L   F
Sbjct: 358 KTSDVDVKGLKAKCIEAMNDDLNTPIVISHLFDGAKIINNIFAGNNTISAEDLEELKDTF 417

Query: 386 NASA-HILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           N     ILG++             S  ++ L+++RLI  + K ++++D IR +L S GF 
Sbjct: 418 NLFLFDILGMKTENSSSGDREAAYSKVVDMLLEQRLIAKQNKDWATSDQIRDELTSLGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K     +
Sbjct: 478 IKDTKEGSEWK 488


>gi|33863429|ref|NP_894989.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33640878|emb|CAE21334.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
          Length = 511

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 171/509 (33%), Positives = 240/509 (47%), Gaps = 76/509 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +   +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL R L + 
Sbjct: 11  LPVSLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWR 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VT+V+N TDIDDKI++RA ++        ++  I+ +N + F +D   L  L P 
Sbjct: 71  GY--TVTFVQNFTDIDDKILKRAAEK------ECSMQEISEQNIEAFHQDMDSLGILRPD 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+      
Sbjct: 123 RMPRATQCLDGIRSLIGELEASGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGR 182

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH G
Sbjct: 183 VADAEEARKQHSFDFALWKGAKSGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLG 242

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE   
Sbjct: 243 GADLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLEN-- 299

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------- 346
                     +RL +L  HYR+P+DFT   +  A               I          
Sbjct: 300 ----GVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYSETLNWPEC 355

Query: 347 ---------------------IDPAVLSALYNDLNTVSAIQALHKLAR------------ 373
                                I    + AL +DLN+  AI  L  LAR            
Sbjct: 356 KPLPQGVIQAAHPSNQEQCNKIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLKRG 415

Query: 374 -----ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLIL 419
                + T   +LLP   +    A++LG+E  K      E  N+     I++ +  R   
Sbjct: 416 DTKAIQETAKLNLLPRWQLLVELANVLGLEAEKAAQPAPERNNRVDENHIQRAIATRKEA 475

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNP 448
              + F+ AD IR +L ++G  L D    
Sbjct: 476 KAARDFAKADLIRDELRAQGIELIDKPGG 504


>gi|154490024|ref|ZP_02030285.1| hypothetical protein PARMER_00253 [Parabacteroides merdae ATCC
           43184]
 gi|154089466|gb|EDN88510.1| hypothetical protein PARMER_00253 [Parabacteroides merdae ATCC
           43184]
          Length = 492

 Score =  524 bits (1349), Expect = e-146,   Method: Composition-based stats.
 Identities = 165/492 (33%), Positives = 237/492 (48%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  I IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPISIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++      L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHHAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        NYG  S R ID+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESEGSVYFDVEKYNKDHNYGVLSGRNIDDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NP DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKRNPIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + E   + W+HN  + + G+KM KS GNFIT+ E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGEDMVHYWMHNNMITINGQKMGKSLGNFITLEEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                K   +++    IR  +L  HYR  +DF+ + L  AE  L +              
Sbjct: 298 FTGDNKVLSQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLMDAYNHLMKLKAS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
              +     +      A+ +DLN+   I  L   AR      D     +A          
Sbjct: 358 DVSTVDVKDLRRKCYDAMNDDLNSPIVIAHLFDAARAINSVKDGKATISAEDLKELQDVF 417

Query: 388 ---SAHILGIEVCKEH----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                 ILGI+          N+    A++ L+  R      K ++++D IR +L + GF
Sbjct: 418 HTFVFDILGIKDEAASGGSNNNEAFGKAMDLLLTIRQQAKANKDWATSDKIRNELTAIGF 477

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 478 DIKDTKDGAEWK 489


>gi|56416697|ref|YP_153771.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|61216132|sp|Q5PB14|SYC_ANAMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56387929|gb|AAV86516.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 466

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 195/484 (40%), Positives = 274/484 (56%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL      F   +   + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+  Y E 
Sbjct: 1   MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII     E      N +I+ +T+  T+ F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINATESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+++I  +I  GHAY     + F   S  +YG+ S RK+ +   G+RV     
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T ++      W SPWG GRPGWH+ECSAMS  YLG  FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENEI+QSCCA    + A  W+HNGFL +  G KMSKS GN IT+  LL       
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLSN----- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIID 348
                 VIR   L THYR+P+D+  + + +A+  L+K  +           T      + 
Sbjct: 288 -GVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILG-IEVCKEHL 401
            AV+++L +D+NT +AI ALH+L +E  K ++      L  + N SA ++G      E  
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406

Query: 402 NKNI-----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             ++        I +L+++R+   K   F  AD IR+ L + G  + D K+       TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461

Query: 457 WKQK 460
           W +K
Sbjct: 462 WHRK 465


>gi|198283982|ref|YP_002220303.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218665072|ref|YP_002426619.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|198248503|gb|ACH84096.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218517285|gb|ACK77871.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 462

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 181/476 (38%), Positives = 249/476 (52%), Gaps = 46/476 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++TL R  T  + + P+++ +YVCG TVYDF H+G+AR M+ FD + R LR    E  V
Sbjct: 9   LFDTLRRSKTPLEVLRPNHVGLYVCGMTVYDFCHLGHARVMVTFDTVVRYLRERGYE--V 66

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TYVRNITDIDDKII RA      +   ++I  +T++      +D   L C  P  +PRAT
Sbjct: 67  TYVRNITDIDDKIIRRA------LECGESIQSLTARFIDAMHEDEAALLCRRPDLEPRAT 120

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            H+  M  LI  +I  GHAY A N ++ +   S P YG  S + IDE   G RV     K
Sbjct: 121 EHVGAMQTLIGELIHRGHAYVAANGDVYYAVRSFPEYGRLSGKSIDELTSGARVEVGEEK 180

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP W S WG GRPGWHIECSAMS+  LG  FDIHGGG DL FPHH
Sbjct: 181 RDPLDFALWKAAKPGEPSWPSAWGEGRPGWHIECSAMSADALGCAFDIHGGGADLQFPHH 240

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQS  A      A+ W+HNGF+ +   KMSKS  NF T+ ELL         +   
Sbjct: 241 ENEIAQSQGAGCA--FAHYWMHNGFVRINDEKMSKSLNNFFTVRELLPR-------YSGE 291

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLSAL 355
           V+R  +L +HYR P+++    L +A   L++              +           +A+
Sbjct: 292 VLRFFILSSHYRSPLNYAEDALEQARAGLTRLYTALRGMPRPKIVAEMGSEWRERFHAAM 351

Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH----LNK 403
            +D +T +A+  L  LARE  +  D        L  +    A +LG+           + 
Sbjct: 352 SDDFHTPAALAVLFDLARELNRLRDEGSEVAAPLATLLRELAGVLGLLQQDAEGFLRGHD 411

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                I+  +  R    + + F+ AD IR++L + G ILED      G   T W++
Sbjct: 412 ADVSWIDGRIAARAAARQARDFAGADAIRQELTAAGVILED------GPGGTTWRR 461


>gi|218131787|ref|ZP_03460591.1| hypothetical protein BACEGG_03408 [Bacteroides eggerthii DSM 20697]
 gi|217986090|gb|EEC52429.1| hypothetical protein BACEGG_03408 [Bacteroides eggerthii DSM 20697]
          Length = 491

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 163/491 (33%), Positives = 243/491 (49%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVAQYYINRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIALVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              +R    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTSRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHAECTAMGKKYLGENF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A +     + W+HN  L + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGHDMVHYWMHNNMLTVNGQKMGKSYGNFITLEEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T     +++    IR   L  HYR  +DF+ + L  AE  L++          I PA
Sbjct: 298 FTGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGLDKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNAS 388
                           A+ +DLN+   I  L + A+               DL  +    
Sbjct: 358 ATSTVDAKALRAKCYEAMNDDLNSPIVIAHLFEGAKMVNNILAGNDTITAEDLKELKETF 417

Query: 389 ----AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++                ++ L++ER+     K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLKEDNASNAEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDGKDGCEWK 488


>gi|255692897|ref|ZP_05416572.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
 gi|260621346|gb|EEX44217.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
          Length = 493

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 168/493 (34%), Positives = 251/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      + E  +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIEKKARLEELEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVQKILDAGYAYESEGSVYFDVAKYNKDHHYGRLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I PA
Sbjct: 298 FNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALEKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP 383
                             A+ +DLNT   I  L + AR                  DL  
Sbjct: 358 ATTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKDLKE 417

Query: 384 IFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            F+  +  I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|194366504|ref|YP_002029114.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|194349308|gb|ACF52431.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 458

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 179/477 (37%), Positives = 255/477 (53%), Gaps = 40/477 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++N L R++  F  +DP+   +YVCGPTVY++ HIGNAR  +VF VL  LLR  +G
Sbjct: 1   MTLRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y RNITD+DDKI   AR++   I      S IT +    + +D   L    P  +
Sbjct: 61  G--LRYARNITDVDDKINNAAREQGVPI------STITDRFAAAYREDMAALGVAPPDIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  T HIPQ+I +I  +I  GHAY A   ++F  SS   YG  SRR  +E   G RV   
Sbjct: 113 PEVTAHIPQIITMIGQLIASGHAYPAEGHVLFAVSSFEGYGKLSRRDPEEMLAGARVDVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S+   PGWESPWGRGRPGWHIECSAM++ +LG+  DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA      A  W+HNG LN  G KMSKS GN   +++L+       R  
Sbjct: 233 PHHENELAQSECAHGGRIFARFWLHNGMLNFGGAKMSKSVGNIERVHDLV-------RQH 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------IIDPAVLSALY 356
           P   +RLA+L  HYR+P++++   + ++   L +   T            I   V + L 
Sbjct: 286 PPEALRLALLSAHYRQPLEWSDALIEQSVRTLDRLYGTLRELASVVAVVAIPATVEATLD 345

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------------VCKEHLNK 403
           +DLNT  A+  + ++A ++ +  D          +LG                     + 
Sbjct: 346 DDLNTPQALAEVARIAADARRATDPTEQARLKGELLGAGLALGLLQADPAQWFGTAAGDD 405

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                I+ L+  R    + + F+ +D IR QL ++G +LED        +  RW +K
Sbjct: 406 GDDARIQGLIDARAAAKQARDFARSDAIRDQLAAEGIVLEDT------PQGVRWSRK 456


>gi|331012668|gb|EGH92724.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 391

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 159/385 (41%), Positives = 224/385 (58%), Gaps = 25/385 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 8   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 66

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR         ++   +T++      +D  RL  L P  +PR
Sbjct: 67  -LTYVRNITDIDDKIINRARDN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 119

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 120 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 179

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG  FDIHGGG DL FP
Sbjct: 180 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 240 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSAL 355
             V+R  ++ +HYR  I+++   L E++  L ++        + +PA          +A+
Sbjct: 292 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 351

Query: 356 YNDLNTVSAIQALHKLARESTKNHD 380
            +D  T  A   L ++ RE  +  +
Sbjct: 352 NDDFGTPEACAVLFEMVREINRLRE 376


>gi|309787051|ref|ZP_07681663.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924629|gb|EFP70124.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 437

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 169/459 (36%), Positives = 243/459 (52%), Gaps = 48/459 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  HIG+ R  + FDV+ R LR+   +  + YVRNITDIDDKII+RA +  
Sbjct: 1   MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK--LKYVRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY 
Sbjct: 58  -----GESFVALVDRMIAEMHKDFNALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYV 112

Query: 148 AN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
            +  +++FD  + P YG  SR+ +D+   G RV     K+N  DF+LWK S   EP W S
Sbjct: 113 VDNGDVMFDVPTDPTYGVLSRQDLDQLLAGARVDVVDDKRNTMDFVLWKMSKEGEPSWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDG-QYVNYWM 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+G + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + 
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284

Query: 327 LTEAEILLSKWPQ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST- 376
           L +A   L +                    +   + A+ +D NT  A   L  +ARE   
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344

Query: 377 -KNHDLLPI------FNASAHILGIEVCK--------EHLNKNISIAIEKLVQERLILLK 421
            K  D+             + +LG+   +           + +    IE L+Q+RL   K
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K +++AD  R +L   G +LED      G + T W++K
Sbjct: 405 AKDWAAADAARDRLNEMGIVLED------GPQGTTWRRK 437


>gi|257784983|ref|YP_003180200.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257473490|gb|ACV51609.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 493

 Score =  523 bits (1348), Expect = e-146,   Method: Composition-based stats.
 Identities = 184/514 (35%), Positives = 255/514 (49%), Gaps = 79/514 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT   K  EF+ ID   IRMYVCGPTVYD  HIGNAR  + FDV+ R L Y   E 
Sbjct: 1   MLVYNTQTHKKEEFKPIDEGKIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLMYKGFE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII+RA ++            ++ + +Q F+K   R   L P  +PR
Sbjct: 60  -VTFAQNLTDVDDKIIQRANEQ------GRTAQEVSEEFSQAFIKQMHRFNILDPDIRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ I  M+ +IQ++I  G+AY   + ++ F   S  +YG  S R +D+ + G RV    
Sbjct: 113 ATHEIEAMLQMIQSLIEQGYAYAVPSGDVYFSVRSDHDYGVLSGRDLDQLRAGERVEVND 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWH EC AM   YLG   DIHGGG DL+FP
Sbjct: 173 EKRDPFDFALWKAAKPGEPSWSSPWGEGRPGWHSECCAMIHRYLGTPIDIHGGGSDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA      AN W+H G L ++G KMSKS GNF T+ E+L+        +P
Sbjct: 233 HHENETAQASCAWHA-PLANYWMHTGMLRVDGEKMSKSLGNFYTLKEVLD-------KYP 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGIIDP--- 349
           A  +RL ML THYR P+DF+ +RL      L +           + Q+S    + D    
Sbjct: 285 ADAVRLLMLQTHYRAPLDFSFERLEGTVGTLERMKTCVANLRWAYKQSSAQHELSDADRT 344

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNA----- 387
                        + + +D NT  A+ A+  L   +        +N    P+  A     
Sbjct: 345 LAEAINIAQSEFDAQMDDDFNTAGALAAIFALVTAANTYLAEVGQNVGASPVLRASDMLC 404

Query: 388 -SAHILGIEVCKEHLNKNI-------------------SIAIEKLVQERLILLKMKKFSS 427
                LGI++ +     ++                     A E L+  R      K ++ 
Sbjct: 405 ELTGALGIDLTQAASTSDLPEELVALAAQVAAYEGSSADEAAEVLLAARQEARSQKNWAV 464

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           AD IR  +   G ++ED           R K+K 
Sbjct: 465 ADQIRDGIAELGLLIEDTAA------GARLKRKA 492


>gi|309790456|ref|ZP_07685017.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308227504|gb|EFO81171.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 477

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 182/490 (37%), Positives = 252/490 (51%), Gaps = 56/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYN+L RK+   + ++P  +RMYVCG TVYD AHIG+A   +VFD++ R L +   
Sbjct: 9   MTIQIYNSLTRKVEPLETVEPQVVRMYVCGVTVYDDAHIGHAMSAVVFDIIRRYLEFRGY 68

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V ++ N TD+DDKII RA        +      + ++   +F+    RL  L  T  
Sbjct: 69  E--VRHIVNFTDVDDKIIARAAT------LGRDPLTMAAQYADEFLAQLERLNVLPATAY 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+ + ++I   + +I  GHAY A  ++ F  +S  +YG  S R ++E   GTR    
Sbjct: 121 PRATHTMAEIIDFTERLIAAGHAYPAEGDVYFRVASDADYGKLSGRSLEEMLTGTRFEVD 180

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++PADF LWK + P EP W SPWG GRPGWHIECSAMS  +LG+  DIHGGG DL+F
Sbjct: 181 PRKESPADFALWKGAKPGEPAWPSPWGNGRPGWHIECSAMSMKHLGEEIDIHGGGNDLVF 240

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNL------EGRKMSKSNGNFITINELLETKK 296
           PHHENEIAQS C    +  A  W+HNG L L      +  KMSKS GN +TI+  L    
Sbjct: 241 PHHENEIAQSECLTG-KSFARYWVHNGMLQLVNPETRQVEKMSKSLGNVVTIDSFLS--- 296

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------------WPQ 339
                + A V RL +L ++YR P+ +  +   +    L +                    
Sbjct: 297 ----QYDADVFRLIVLSSYYRSPLTYNTEIAADNARKLDRLLGALLPALGSNASGPAVES 352

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASA 389
            + S      A LSA+  D NT  A+ AL +L R      D                  A
Sbjct: 353 LNQSVERTRSAFLSAMDADFNTAGALAALFELVRAINVARDAGVGGDAFSAAQNSLRELA 412

Query: 390 HILGIEVCKEHL-NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            +LG+ +  +H   + ++  IE L++ R  L K K+F  AD IR +L   G  LED    
Sbjct: 413 SVLGLRLNPQHAKQQEVAPFIELLIELRTSLRKAKQFELADTIRTRLADLGVTLED---- 468

Query: 449 DNGQRMTRWK 458
             G + TR+K
Sbjct: 469 --GPQGTRYK 476


>gi|99080994|ref|YP_613148.1| cysteinyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123378967|sp|Q1GHI0|SYC_SILST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|99037274|gb|ABF63886.1| cysteinyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 457

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 209/452 (46%), Positives = 270/452 (59%), Gaps = 20/452 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+  RK   F  IDP N++MYVCGPTVYD AH+GNARP++VFDVL+RLLR+ YG+K
Sbjct: 4   IKLHNSKTRKKEVFTPIDPDNVQMYVCGPTVYDRAHLGNARPVVVFDVLFRLLRHVYGDK 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RN TD+DDKI  RA +         AI  ITS+  Q F++D   L  L PTH PR
Sbjct: 64  KVTYARNFTDVDDKINTRAAES------GRAIGEITSETIQWFLEDMGALGALQPTHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQMI +I+ +I   HAYEA   ++F   S    YG  S R +D+   G RV    
Sbjct: 118 ATEYIPQMIAMIEELIARDHAYEAEGHVLFAVDSWREGYGQLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK S   +PGWESPWGRGRPGWHIECSAMS   LG+ FDIH GG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSDADQPGWESPWGRGRPGWHIECSAMSHDLLGESFDIHCGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   + A  W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 238 HHENEIAQSCCANPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYNDLN 360
             V+R   L THYR+P+D+T ++  EAE  L KW   +           AV+ AL +DLN
Sbjct: 292 GEVVRFVFLQTHYRKPMDWTEKKAAEAEATLRKWRALTAGIEPAATAAAAVVDALSDDLN 351

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL--NKNISIAIEKLVQERLI 418
           T  AI  +HKLA        L         +LG E+ +     + ++S    +L + R  
Sbjct: 352 TAGAIAEMHKLAAAGDGAGLLAA--GQLVGLLGDEMGEWAAAPSVDLSAHEARLFKARQA 409

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            ++ K FS  D ++      G  +   K    
Sbjct: 410 AMETKDFSEVDRLKAAYTEAGLEVRMSKTGVE 441


>gi|260221171|emb|CBA29469.1| Cysteinyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 483

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 176/478 (36%), Positives = 245/478 (51%), Gaps = 43/478 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++I+NTL R +  F  I+P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+   
Sbjct: 25  PMSLRIFNTLTRSLQPFTPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASG 84

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYVRNITDIDDKII RA      +     I  +T +       D   L    P+ 
Sbjct: 85  --MQVTYVRNITDIDDKIIRRA------VERGITIRQLTDEMIAAMHADIGALHIEPPSV 136

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT ++PQM+ LI  +   G AY A N ++ +       YG  S + +DE + G RV 
Sbjct: 137 EPRATEYVPQMLSLIGELEAKGLAYRASNGDVNYSVRKFEGYGKLSGKSLDELRAGERVA 196

Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K++P DF+LWK + P EP    WES +G GRPGWHIECSAMS   LG  FDIHGGG
Sbjct: 197 VLDGKEDPLDFVLWKSAKPEEPPEAKWESVFGTGRPGWHIECSAMSCATLGTTFDIHGGG 256

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENEIAQS  A   +  AN W+HNGF+ ++  KMSKS GNF TI ++L     
Sbjct: 257 ADLQFPHHENEIAQSEGAHG-QALANFWMHNGFVRVDNEKMSKSLGNFFTIRDVL----- 310

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             R + A  +R  ++  HYR  ++++   L +A   L +     +     D         
Sbjct: 311 --RQYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSQVQATDISIDWSNPF 368

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEHL---- 401
                +A+  D  T  A+  L  LA E  ++   +   +  A    LG+     +     
Sbjct: 369 AARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSVEAASLLKALGACLGLLQADANAYLQS 428

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                   I++ + +R      K F+ AD IRK L ++G +L+D          T W+
Sbjct: 429 GAGLDEATIQQRIADRAAAKAAKDFALADAIRKDLLAQGIVLKDSAA------GTTWE 480


>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|187631665|sp|A3M419|SYC_ACIBT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558609|sp|B2HX34|SYC_ACIBC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
 gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 473

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 270/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+++ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + ++        IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|153807261|ref|ZP_01959929.1| hypothetical protein BACCAC_01539 [Bacteroides caccae ATCC 43185]
 gi|149130381|gb|EDM21591.1| hypothetical protein BACCAC_01539 [Bacteroides caccae ATCC 43185]
          Length = 493

 Score =  523 bits (1347), Expect = e-146,   Method: Composition-based stats.
 Identities = 167/493 (33%), Positives = 248/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEELEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +     G + PA
Sbjct: 298 FNGTHKLLTQAYTPMTIRFFILQAHYRSTVDFSNEALIASEKGLQRLIEAIDGLGKVTPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFN 386
                             A+ +DLNT   I  L + AR               DL  +  
Sbjct: 358 SATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNVIAGNATISAEDLKELKE 417

Query: 387 AS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFCFDIMGLKEEKGSSDSRENAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 473

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 269/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF   +   I +YVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII RA +        ++I  +T++      +D   L C+AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIARANEN------GESIQQLTARFIDAMNEDAADLGCVAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I  ++  G AY A N ++ F+ S    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEATTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  LS++  +  +            ++ + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQAMVLYSTLRQLTNILGLVQHNVDE 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + ++        IE L+Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQDALALSDTDIEDLIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTIWRR 471


>gi|317474598|ref|ZP_07933872.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
 gi|316909279|gb|EFV30959.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
          Length = 491

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 163/491 (33%), Positives = 243/491 (49%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVAQYYINRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIALVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              +R    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTSRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKKYLGENF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A +     + W+HN  L + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGHDMVHYWMHNNMLTVNGQKMGKSYGNFITLEEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T     +++    IR   L  HYR  +DF+ + L  AE  L++          I PA
Sbjct: 298 FTGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGLDKITPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNAS 388
                           A+ +DLN+   I  L + A+               DL  +    
Sbjct: 358 ATSTVDAKALRAKCYEAMNDDLNSPIVIAHLFEGAKMVNNILAGNDTITAEDLKELKETF 417

Query: 389 ----AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++                ++ L++ER+     K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLKEDNASNAEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDGKDGCEWK 488


>gi|329906071|ref|ZP_08274354.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327547346|gb|EGF32177.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 464

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 180/483 (37%), Positives = 257/483 (53%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL R+   F  +     RMYVCG T+YD+ HIG+ R M+ FDV+YR L+    
Sbjct: 2   TSLKIYNTLAREKQLFTPMVAGEARMYVCGMTIYDYCHIGHGRMMMAFDVVYRWLQVSGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   ++IS +T +       DT  L  L PTH 
Sbjct: 62  --SVTYVRNITDIDDKIIRRA------VENKESISSLTERFIDAMAYDTAALGILPPTHA 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+ +  ++ +     P YG  S + +D+ + G RV  
Sbjct: 114 PRATRYVPQMLNMITRLQEKGLAYQGDDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDV 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK +   EP    W SPWG GRPGWHIECSAM+   LG+ FDIHGGG 
Sbjct: 174 NTGKRDPLDFVLWKAAKDSEPEDAKWASPWGHGRPGWHIECSAMACALLGEQFDIHGGGT 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A+  +  AN W+HNG + ++  KMSKS  NF  I ++L      
Sbjct: 234 DLQFPHHENEIAQSEGAN-DKPFANYWLHNGHVRIDNEKMSKSLDNFFLIRDVLA----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----QTSTSKGIIDPA---- 350
              + A V+R  +L  HYR P++++   L +A + L++        + S+  +D A    
Sbjct: 288 --KYDAEVLRFFILRAHYRSPLNYSDTHLDDARVALTRLYTALKDVAPSEEELDWASPYP 345

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILG---IEVCKEH 400
                A+ +D NT  A+  L  LA E  ++ D      L    A   +L    +E  +  
Sbjct: 346 QRFAEAMDDDFNTPLALAVLFDLATEINRSGDPALAAQLRALAAVLGLLERSPLEFLQGA 405

Query: 401 LNKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                S     L+ E    R+     + +++AD +R +L + G +LED         +T 
Sbjct: 406 HGTVASDEDNALIAEKIAARIAAKIARDYATADRLRDELLAAGILLEDKPG-----NITE 460

Query: 457 WKQ 459
           W++
Sbjct: 461 WRR 463


>gi|163746511|ref|ZP_02153869.1| cysteinyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161380396|gb|EDQ04807.1| cysteinyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 456

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 197/454 (43%), Positives = 265/454 (58%), Gaps = 22/454 (4%)

Query: 1   MKKKI--KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           M + +  K++NT  RK  +F  ID  N++MYVCGPTVYD AH+GNARP+IVFDVLYRLLR
Sbjct: 1   MTRDLTIKLHNTATRKKEDFTPIDADNVQMYVCGPTVYDRAHLGNARPVIVFDVLYRLLR 60

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           + YG   VTYVRN TD+DDKI  RA           +I  IT++ TQ ++ D   +  L 
Sbjct: 61  HVYGTDHVTYVRNFTDVDDKINARAATS------GRSIGEITAETTQWYLDDMAAVGALE 114

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P H PRAT +IPQM+ +I+ +I  G+AYEA   ++F       YG+ S R +D+   G R
Sbjct: 115 PDHMPRATQYIPQMVAMIRGLIDEGYAYEAEGHVLFRVRKYAEYGALSGRSVDDMIAGAR 174

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V    +K++P DF+LWK S    PGW SPWG+GRPGWHIECSAM+   LG  FDIHGGG+
Sbjct: 175 VEVAPYKEDPMDFVLWKPSDEGTPGWPSPWGQGRPGWHIECSAMAHDLLGAQFDIHGGGI 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS CA      AN W+HN  L +EG+KMSKS GNF T+ +LL+     
Sbjct: 235 DLQFPHHENEIAQSKCAGHG--FANYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--QTSTSKGIIDPAVLSALY 356
            +     VIR  ML THYR+P+D+T ++  EAE  L KW               +++ L 
Sbjct: 288 -QGVQGEVIRFVMLSTHYRKPMDWTEKKREEAEKTLRKWYLQAAEAEAAPPSAELVALLA 346

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS-IAIEK-LVQ 414
           +DLNT  A+   H+L+  +     L         ++G  + +    + +    IE  L  
Sbjct: 347 DDLNTHGALTECHRLSN-ANDTAGLRGAM-TLLGLMGDLIPEWAAVQALDLSDIEAFLSD 404

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            R   ++ K F+  D I+  L S G  ++  K+ 
Sbjct: 405 ARATAMETKDFAEVDRIKTALTSVGIEVQMSKDG 438


>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|226735042|sp|B7GWA1|SYC_ACIB3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735043|sp|B7IBU3|SYC_ACIB5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558611|sp|B0VAU1|SYC_ACIBY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 473

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 270/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   R+  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + ++        IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|78189774|ref|YP_380112.1| cysteinyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
 gi|109894890|sp|Q3APK6|SYC_CHLCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78171973|gb|ABB29069.1| cysteinyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
          Length = 480

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 156/484 (32%), Positives = 233/484 (48%), Gaps = 47/484 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R    F+ +    + +YVCGPTVY  AH+G+A+  I FDV+ R  R    + 
Sbjct: 3   LAIYNSLSRTKEIFEPLHSGVVSIYVCGPTVYGHAHLGHAKSYISFDVVVRWFRQSGYK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y++NITD+     +    E   +            I    T+ F +D  RL    P 
Sbjct: 62  -VKYIQNITDVGHLTDDADEGEDKIMKQARLEKTDPMEIAQFYTRSFYEDMDRLGVERPN 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRV 179
             P AT HIP+ I L++ ++  G+AYE N  + F  +S   YG  S R   +  + G+RV
Sbjct: 121 IAPTATAHIPEQIALVETLLRKGYAYEVNGNVYFSVNSFAGYGKLSGRTDQEALQSGSRV 180

Query: 180 PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +  K++ +DF LWK++       W+SPW  G PGWH+ECSAM+  YLG+  DIHGGG+
Sbjct: 181 GIRSEKRDASDFALWKKAEEGHIMKWQSPWSVGYPGWHLECSAMAMKYLGETIDIHGGGM 240

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           +  FPHHE EIAQS  A   +     W+HN  + + G KM KS  NF+ + ELL+T+   
Sbjct: 241 ENKFPHHECEIAQSEAATG-KPYVRYWMHNNMVTVNGTKMGKSLKNFVNLKELLQTRN-- 297

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIID--- 348
                   +R  +L +HYR P+D++   L  A   L K  +T       +   G +D   
Sbjct: 298 -----PLALRFFILQSHYRSPLDYSEAALDAAAQGLEKLHETLRRFRHQAAGSGSLDVTP 352

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN------------ASAHILGI 394
                  A+ +D NT  AI  L  L++      D   I              A+ + LGI
Sbjct: 353 YAERFSEAMNDDFNTPIAIAVLFDLSKAINSALDSKGIVEADRAAIEAFLTIAATNTLGI 412

Query: 395 ---EVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               +  E  N N    +   ++ +++ R    K K F+++D IR  L + G  ++D K 
Sbjct: 413 ASNNLADEQSNGNSMQRLDKVMQIMLELRHNARKQKDFATSDKIRDMLLAAGIEIKDTKE 472

Query: 448 PDNG 451
               
Sbjct: 473 GAVW 476


>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 473

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 188/488 (38%), Positives = 270/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   EK  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + ++        IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|256827720|ref|YP_003151679.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583863|gb|ACU94997.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 499

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 184/507 (36%), Positives = 253/507 (49%), Gaps = 79/507 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNT  RK  +F+ I+   +RMYVCGPTVY++ HIGNAR  + FD++ R L +   + 
Sbjct: 2   IRIYNTQTRKKEDFKTIEVGRVRMYVCGPTVYNYIHIGNARTFVSFDIVRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII+RA +E          + I  K T  F++D   +  L P  +PR
Sbjct: 61  -VTFVQNVTDVDDKIIKRAGEE------ECDAAEIARKYTDAFIEDMHAMGVLDPDKRPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
           AT  IP+MI L+Q +I  GHAYEA  ++ F   S P YG  S R IDE + G R      
Sbjct: 114 ATEEIPEMIELVQRLIDTGHAYEAAGDVYFSVRSFPAYGHLSHRDIDELESGHRDLRASH 173

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
                  K++P DF +WK + P EP W+SPWG+GRPGWHIECSAMS  YLG  FD+HGGG
Sbjct: 174 VEGIGDRKRDPLDFAIWKAAKPGEPSWKSPWGQGRPGWHIECSAMSRKYLGLPFDVHGGG 233

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENE AQS  A   E   N W+H+G L +   KMSKS GNF+ + ++L     
Sbjct: 234 ADLIFPHHENETAQSEAAWG-ETFTNYWMHSGMLQINAEKMSKSLGNFLLLRDVL----- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLT-------EAEILLSKWPQTSTSKGIID-- 348
             +S     +R+ ML THYR P+DF+ +RLT         E L+++     T+   I   
Sbjct: 288 --KSVNPRSLRMLMLQTHYRSPLDFSEERLTEAAAALARIEALVARLDWAITNAADIPSP 345

Query: 349 --------------PAVLSALYNDLNTVSAIQALHKLARESTKN--------------HD 380
                            + A+ +D NT  A+ A+  L  +                    
Sbjct: 346 LKAKELLAQVQQTRNEFIYAMDDDFNTAGALGAIFTLVGDLNTQLGDATVSRSDIPVLRQ 405

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL-------------------ILLK 421
                     + GIEV ++         +  L  E                        +
Sbjct: 406 ARESIVELMGVFGIEVVQQPSESGYPAQVVDLAAELAGFAGTSPSDAVDALLGARAAARQ 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNP 448
            K F+ AD +R ++   GF +ED    
Sbjct: 466 AKNFALADAVRDRMSDLGFTIEDTPQG 492


>gi|29348760|ref|NP_812263.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568897|ref|ZP_04846307.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298387124|ref|ZP_06996678.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
 gi|61216345|sp|Q8A2F4|SYC_BACTN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29340666|gb|AAO78457.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840916|gb|EES68997.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
 gi|298260274|gb|EFI03144.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
          Length = 493

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 168/493 (34%), Positives = 247/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEELEPMEVVQYYLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +       I PA
Sbjct: 298 FNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLIEAIEGLDKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP 383
                             A+ +DLNT   I  L + AR                  DL  
Sbjct: 358 ATTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNINAGNATISAEDLKDLKE 417

Query: 384 IFNAS-AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            F+     I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFCFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEVKDTKDGFEWR 490


>gi|319408293|emb|CBI81946.1| Cysteinyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 502

 Score =  522 bits (1346), Expect = e-146,   Method: Composition-based stats.
 Identities = 218/504 (43%), Positives = 293/504 (58%), Gaps = 55/504 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL RK   F  ID + +R+YVCGPTVYD+AHIGNAR +IVFD+L+R LR+ YGE 
Sbjct: 4   LRFYNTLTRKKENFTPIDAAKVRLYVCGPTVYDYAHIGNARSVIVFDILFRFLRHVYGED 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITD+DDKI  RA  ++P + +NDAI  +T     QF KDT  L CL PT QPR
Sbjct: 64  HVIYARNITDVDDKINARAIHKYPELALNDAIRQLTECTYDQFQKDTEALGCLLPTSQPR 123

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS---IPNYGSFSRRKIDEQKMGTRVPE 181
           AT+H+ ++  LI+ ++  GHAY A N I+F  SS    P YG F++R +DE +  +R+  
Sbjct: 124 ATDHLEEIRSLIERLLEKGHAYIAGNHILFSISSMGEYPRYGEFAKRSLDEMRADSRIDI 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYL----------- 227
             +KK   DF+LWK S   EPGW SP    G GRPGWHIECSAMS   L           
Sbjct: 184 AIYKKEKMDFVLWKPSQEWEPGWPSPAGIPGLGRPGWHIECSAMSMAKLLAPYGGGLNCD 243

Query: 228 ---GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
                VFDIHGGG+DL+FPHHENEIAQSC A   ++ AN W+HNGFL +EG+KMSKS GN
Sbjct: 244 DLAANVFDIHGGGIDLLFPHHENEIAQSCSAFGTKRMANFWMHNGFLQVEGKKMSKSLGN 303

Query: 285 FITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           FITI  LLE+              ++W    IR +ML THYREP+++T  RL ++   L 
Sbjct: 304 FITIRSLLESDFLEFNDALTDEIRQNWAGLSIRFSMLQTHYREPLNWTTHRLAQSSSELY 363

Query: 336 KWPQT-------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +W +              ID ++++ L +DLNT +A   L K  +E              
Sbjct: 364 RWYEFLRCEKCCLDDDKSIDESLINTLSDDLNTSNAFTILRKFYKEGNAI-----ALARG 418

Query: 389 AHILGIEVCKEHLNKNIS------------IAIEKLVQERLILLKMKKFSSADYIRKQLE 436
             + G+   ++   + I               I++ + ERL L+  K++ +AD IR +L 
Sbjct: 419 MDLFGL--LRQEWVQEIECPLFVRKTYLDLKFIDQRIAERLQLIHNKEWEAADKIRDELA 476

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
             G  L+D K+P  G+R+T W+ K
Sbjct: 477 VGGISLKDEKDPQTGERITTWEIK 500


>gi|298377784|ref|ZP_06987734.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
 gi|298265230|gb|EFI06893.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
          Length = 491

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 159/491 (32%), Positives = 235/491 (47%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S R I++ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSGRNIEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLEQF 297

Query: 292 LETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                   +  + A  IR  +L  HYR  +DF+ + L  AE  LS+  +           
Sbjct: 298 FTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHLMKLQPS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
              +     +      A+ +DLN+   I  L   AR      D     +           
Sbjct: 358 ATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDAARAINSVKDGKATLSEEDLKELQEVF 417

Query: 388 ---SAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++        N    S A++ L+  R      K ++++D IR +L + GF 
Sbjct: 418 HLFLFDILGMKDEASAGGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNELTAMGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGAEWK 488


>gi|61216286|sp|Q7V6K0|SYC_PROMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 499

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 171/507 (33%), Positives = 239/507 (47%), Gaps = 76/507 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MSLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI++RA ++        ++  I+ +N + F +D   L  L P   
Sbjct: 61  --TVTFVQNFTDIDDKILKRAAEK------ECSMQEISEQNIEAFHQDMDSLGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+        
Sbjct: 113 PRATQCLDGIRSLIGELEASGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DAEEARKQHSFDFALWKGAKSGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE     
Sbjct: 233 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLEN---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
                   +RL +L  HYR+P+DFT   +  A               I            
Sbjct: 288 --GVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYSETLNWPECKP 345

Query: 347 -------------------IDPAVLSALYNDLNTVSAIQALHKLAR-------------- 373
                              I    + AL +DLN+  AI  L  LAR              
Sbjct: 346 LPQGVIQAAHPSNQEQCNKIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLKRGDT 405

Query: 374 ---ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLK 421
              + T   +LLP   +    A++LG+E  K      E  N+     I++ +  R     
Sbjct: 406 KAIQETAKLNLLPRWQLLVELANVLGLEAEKAAQPAPERNNRVDENHIQRAIATRKEAKA 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNP 448
            + F+ AD IR +L ++G  L D    
Sbjct: 466 ARDFAKADLIRDELRAQGIELIDKPGG 492


>gi|148239954|ref|YP_001225341.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|187631643|sp|A5GM79|SYC_SYNPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|147848493|emb|CAK24044.1| Cysteinyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 499

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 173/518 (33%), Positives = 243/518 (46%), Gaps = 79/518 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++  NTL R+   FQ +    + +Y CG TVYD  H+G+AR  I +DVL R L + 
Sbjct: 1   MPVSLRFTNTLTRRTEPFQPLKDGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VT+V+N TDIDDKI++RA +E        ++  ++ +N   F  D   L  L P 
Sbjct: 61  GY--AVTFVQNFTDIDDKILKRAAEE------GSSMEAVSERNIDAFHADMDALGILRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PRAT  +  +  LI  +   G AY A+ ++ F       YG  S R + +Q+      
Sbjct: 113 RMPRATRCLEGIRTLIAELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLADQQTNADGR 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E+  K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH G
Sbjct: 173 VADAEEARKQHPFDFALWKGAKAGEPSFPSPWGNGRPGWHIECSAMVREELGDTIDIHLG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS  A   E  A +W+HNG +N+ G KMSKS GNF TI  LLE+  
Sbjct: 233 GADLVFPHHENEIAQSEAATGQE-LARVWLHNGMVNVGGEKMSKSLGNFTTIRALLES-- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------ 350
                  A  +RL +L  HYR+P+DFT + L  A           +   +   A      
Sbjct: 290 ----GLSAMTLRLFVLQAHYRKPLDFTAEALEAATTGWKGLNAALSLGDLHAEALGWTPA 345

Query: 351 -------------------------VLSALYNDLNTVSAIQALHKLAR------------ 373
                                      +A+ +DLN+  A+  L +LAR            
Sbjct: 346 EPMGNDAVVASESSAIDTLLSARQRFSAAMDDDLNSSGALAVLFELARPLRALANRLDRG 405

Query: 374 -----ESTKNHDLLP---IFNASAHILGIEV----CKEHLNKNISIAIEKLVQERLILLK 421
                      +LL    +    A +LG+ +      E  +   S +IE  +  R +  +
Sbjct: 406 DAPNHNDDDGQELLQRWLLLRELAAVLGLRLEHPSAPEEESDLDSQSIEAAIDARRLAKQ 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            K F+ AD IR +L ++G  L D         +T W++
Sbjct: 466 SKDFAEADRIRAELSAQGIELIDKPGG-----ITEWRR 498


>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 473

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 187/488 (38%), Positives = 267/488 (54%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF       I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII RA +        ++I  +T++  +   +D   L C AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIARANEN------GESIQQLTARFIEAMNEDAANLGCAAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  LS++  +  +            +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQTYGQKTVDALDQSFVER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHDVDE 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTIWRR 471


>gi|119476779|ref|ZP_01617089.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450035|gb|EAW31271.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 455

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 186/479 (38%), Positives = 255/479 (53%), Gaps = 47/479 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN+       F+ I P  + MYVCGPTVY+  HIGNARP++VFD LYR+L+  Y 
Sbjct: 1   MTLFVYNSYTGTKEAFEPIKPDTVTMYVCGPTVYNRVHIGNARPVVVFDTLYRVLKTLYS 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RNITDIDDKI+  A+         + I+ I+S+    +  D   L  L P   
Sbjct: 61  --SVIYARNITDIDDKIMAAAKA------GGETIAAISSRYATAYFDDMAELNNLPPDII 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT+H+ +M+ +IQ +I  GHAYEA + I+FD  S+  YG  ++R +++   G RV   
Sbjct: 113 PYATDHVGEMVAMIQTLIDKGHAYEAESHILFDVKSMSGYGKLAKRSLEDMLAGARVDVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK   DF+LWK ST  EPGW+SPWGRGRPGWH+ECSAM   +LG   DIHGGG+DL F
Sbjct: 173 DYKKYAGDFVLWKPSTDEEPGWDSPWGRGRPGWHLECSAMIEKHLGNTIDIHGGGIDLQF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS CA   E     W+HN ++N++G KMSKS GNF  + +LL+        +
Sbjct: 233 PHHENELAQSTCAHDGEPFVRYWMHNAYINIDGEKMSKSLGNFRMVKDLLD-------HY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------DPAVLS 353
           P  V+R ++L  HYR  ++F+   L  A+  L        S             D  V  
Sbjct: 286 PGEVLRFSILSAHYRSELNFSADALDSAQKTLDNLYGVLRSVETTDVDPVIELSDSKVYK 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEV--------CKEH 400
           AL +DLNT  AI+ +H LA+            L      SA ++GI           K  
Sbjct: 346 ALLDDLNTPIAIREIHALAKAMKSASGETQQRLKSELLKSAALMGILQQDPDEWLMVKAG 405

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 I +E  V E     + K +  AD IR +L+ +G IL   ++         WK+
Sbjct: 406 EGDLSDIEVENQVVEMQQARQQKDYKHADDIRDRLQQRGIIL--TRDG--------WKR 454


>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 473

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 187/488 (38%), Positives = 269/488 (55%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATMLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|254510796|ref|ZP_05122863.1| cysteinyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221534507|gb|EEE37495.1| cysteinyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 473

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 205/463 (44%), Positives = 269/463 (58%), Gaps = 23/463 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R    F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 12  IKLHNTRTRTKESFVPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPD 71

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            V Y RN TD+DDKI   A   +Q      +   +   + +    ++ D   L  L P  
Sbjct: 72  HVIYARNFTDVDDKINATALARKQAGADGTLEQLVQERSDETIGWYLHDMGALGALEPNA 131

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVP 180
            PRAT +I QMI +I+++I  GHAY A   ++F   S    YG  S R +D+   G RV 
Sbjct: 132 MPRATQYIAQMIAMIEDLIAKGHAYAAEGHVLFAVDSWREGYGKLSGRSVDDMIAGARVE 191

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKNP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIHGGG DL
Sbjct: 192 VAPYKKNPMDFVLWKPSSDELPGWDSPWGRGRPGWHIECSAMAYELLGESFDIHGGGNDL 251

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA    + A +W+HN  L +EG+KMSKS GNF T+++LLE      +
Sbjct: 252 MFPHHENEIAQSCCAHPEGEFARVWLHNEMLQVEGKKMSKSLGNFFTVHDLLE------Q 305

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYN 357
             P  VIR   L THYR+P+D+T ++  +AE  L KW   +          PAV+ AL +
Sbjct: 306 GIPGEVIRFVFLQTHYRKPMDWTEKKARDAEATLRKWRALTAGIEPAASAAPAVIVALGD 365

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
           DLNT  AI  LH+LA E     D   +  ASA I+G+         E    ++S   E+L
Sbjct: 366 DLNTAGAIAELHRLAAEG----DAAGLL-ASARIIGLLSDDMGAWVEAGAVDLSSYAERL 420

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              R+  ++ K F+  D ++    + G  +   K        T
Sbjct: 421 AHARVAAMQSKDFAEVDRLKAAYIAAGLEVRMGKEGVELVPGT 463


>gi|254486794|ref|ZP_05099999.1| cysteinyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214043663|gb|EEB84301.1| cysteinyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 481

 Score =  522 bits (1345), Expect = e-146,   Method: Composition-based stats.
 Identities = 209/474 (44%), Positives = 269/474 (56%), Gaps = 40/474 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK  +F  ID  N+RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG  
Sbjct: 4   IKLHNTKTRKREDFVPIDSDNVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHVYGPD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +         +I  IT++ TQ F+ D   +  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAES------GRSIGEITAETTQWFLDDMAAVGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IPQMI +I+ +I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATAYIPQMIEMIEGLIAKGHAYAAEGHVLFAVESYKEYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIHGGG DL+FPH
Sbjct: 178 KRNPMDFVLWKPSDGDTPGWDSPWGRGRPGWHIECSAMSYELLGAHFDIHGGGNDLMFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSCCA      AN W+HN  L +EG+KMSKS GNF T+ +LL+         P 
Sbjct: 238 HENEIAQSCCAHPGAGFANYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------HGVPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--VLSALYNDLNTV 362
            VIR  ML THYR+P+D+T ++  EA+  L  W            +  ++  L  DLNT 
Sbjct: 292 EVIRYVMLSTHYRKPMDWTEKKADEAKRKLKSWYDLVKGVEASKASRIIIDNLAEDLNTA 351

Query: 363 SAIQALHKLARE---------------------STKNHDLLPIFNASAHILGIEVCK--- 398
             ++ L +LA +                     +  + +L   F AS  +LG+   +   
Sbjct: 352 FTLRQLDQLAGDIVHNDKFDGQFEAGVPNAPQMARSSSELRSEFKASLQLLGLIGDEVPS 411

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             E    ++S     L   R + ++ K FS  D I+  L   G  ++  K    
Sbjct: 412 WSEETAFDLSRFQRSLEAARSVAMQTKDFSGVDQIKNMLIGAGVQVQMSKEGVE 465


>gi|156937781|ref|YP_001435577.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|187629828|sp|A8AB68|SYC_IGNH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|156566765|gb|ABU82170.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 464

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 179/487 (36%), Positives = 264/487 (54%), Gaps = 59/487 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R++ +F+ ++P  +RMYVCGPTVYD +HIG+AR  + FD++ + LR      
Sbjct: 2   LKVFNTLTRRLEDFKPLEPPLVRMYVCGPTVYDHSHIGHARTWVAFDIIKKYLRLKGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITDIDDKII RAR+      +  +   +    T ++ +   +L    PT  PR
Sbjct: 61  -VIHVQNITDIDDKIINRARE------LGVSWKEVADTYTNEYFELMKKLKVF-PTVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+HI  +I  +Q+++  G+AY   + + FD    P YG  S  K  ++KM ++      
Sbjct: 113 VTDHIDDIIEFVQDLVDKGYAYVTQSGVYFDVDKYPYYGQLSGIK--DKKMWSQEEFVKD 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK + P EP W+SPW +GRPGWHIECS MSS YLGK FD+HGG  DLIFPH
Sbjct: 171 KKNPYDFALWKCAKPGEPWWDSPWCKGRPGWHIECSTMSSKYLGKQFDVHGGARDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS     +      W+H+G+L ++G KMSKS GN + + ++L       +S+  
Sbjct: 231 HENEIAQSEARFGVRPWVKYWLHSGYLTVKGEKMSKSLGNIVPLKDVL-------KSFEP 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDP----- 349
            V+R  +   HYR  +DF+ +RL EA+  L++   T             KG +D      
Sbjct: 284 EVVRYWLSSAHYRTELDFSWERLEEAKRSLTRMRMTVDELRKIVKKESPKGKLDEWEIKA 343

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHI 391
                        A+ ND NT  A  A+ +  R   K  +         +L   N +  +
Sbjct: 344 IYEVSKIRNEFYDAMDNDFNTPEAWAAVREALRLGNKAIEEGSWEVSLAVLEFVNEADKV 403

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
              EV +E +++ +   I+ LV+ R  L +MK++  ADYIR +L+  G  L D       
Sbjct: 404 F--EVFEERVHEGVEPFIDLLVEVRSKLREMKQWELADYIRSKLDELGVKLLDK------ 455

Query: 452 QRMTRWK 458
            + T W+
Sbjct: 456 GKETEWR 462


>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 473

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 187/488 (38%), Positives = 268/488 (54%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWN--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|222100839|ref|YP_002535407.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254781695|sp|B9KAQ8|SYC_THENN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221573229|gb|ACM24041.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 460

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 163/472 (34%), Positives = 237/472 (50%), Gaps = 42/472 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  + P  +RMYVCGPTVYD  H+GNARP +VFDV  R L Y     
Sbjct: 1   MRITNTLTGKKEEFVPLQPGVVRMYVCGPTVYDLIHVGNARPAVVFDVFRRYLEYRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TDIDDKII +A Q      +     ++      ++ +D   L        PR
Sbjct: 59  RVIMVQNFTDIDDKIINKANQ------LGVDPKMVADTFIAEYWRDAHALGIRPANFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  ++ +I+ ++  G+AY+    + FD      YG  S+++I++   G RV     
Sbjct: 113 TTDFVDDIVEIIEKLVERGYAYQTKTGVYFDVRKFKKYGELSKKRIEDLIAGARVEVDET 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K  P DF LWKR+ P EP W SPWG GRPGWHIEC+ MS   LG+ FDIH GG DL+FPH
Sbjct: 173 KNFPLDFSLWKRAKPGEPCWNSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A  W+HNG +   G KMSKS GN  T+ E +       + +  
Sbjct: 233 HENEKAQAEALTG-KIFAKYWMHNGMVRFLGDKMSKSTGNIFTVREAV-------KKYGR 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDP 349
             +R  +L  HYR P+DF+   L++    + +                P+ +T       
Sbjct: 285 DGLRYMILSKHYRSPMDFSEDLLSDYSKAVRRVWEILRRYESNGVTGIPKRNTVYEEYVN 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------ILGI-EVCK 398
             + AL +D NT  A+  L +LA+  +K+ +     NA             +LG+ ++ +
Sbjct: 345 RFVEALDDDFNTPVAVSILFELAKNLSKSMEEGDQENALLFYHLIRREFGPVLGLFDLNE 404

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           E         +  L++ R  L K K++  +D+IR +L   G IL D  +   
Sbjct: 405 ERREVAGESLLGILIEVRETLRKEKRYDLSDWIRDRLRENGIILRDTPSGTE 456


>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|229558610|sp|B0VS71|SYC_ACIBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 473

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 188/488 (38%), Positives = 268/488 (54%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T +      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTMRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N WIH GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|88809002|ref|ZP_01124511.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88786944|gb|EAR18102.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 499

 Score =  522 bits (1344), Expect = e-146,   Method: Composition-based stats.
 Identities = 173/518 (33%), Positives = 239/518 (46%), Gaps = 79/518 (15%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++  NTL R+   FQ +    + +Y CG TVYD  H+G+AR  I +DVL R L + 
Sbjct: 1   MPVSLRFTNTLTRRTEPFQPLKEGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VT+V+N TDIDDKI++RA +E        ++ +++ +N   F  D   L  L P 
Sbjct: 61  GY--AVTFVQNFTDIDDKILKRAAEE------GSSMEVVSERNIDAFHADMDALGILRPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PRAT  +  +  LI  +   G AY A  ++ F       YG  S R + +Q+      
Sbjct: 113 RMPRATRCLEGIRALISELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLADQQTNADGR 172

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E+  K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH G
Sbjct: 173 VADAEEARKQHPFDFALWKGAKAGEPSFPSPWGDGRPGWHIECSAMVREELGDTIDIHLG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENEIAQS  A   E  A +W+HNG +N+ G KMSKS GNF TI  LLE+  
Sbjct: 233 GADLVFPHHENEIAQSEAATGQE-LARVWLHNGMVNVGGEKMSKSLGNFTTIRALLES-- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------ 350
                  A  +RL +L  HYR+P+DFT   L  A           +   +   A      
Sbjct: 290 ----GLSAMTLRLFVLQAHYRKPLDFTSDALEAATTGWKGLNAALSLGDLHAEALGWGAA 345

Query: 351 -------------------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP-- 383
                                       A+ +DLN+  A+  L  LAR      + L   
Sbjct: 346 APMNGGAVLASAPSANEMLLGARQRFSDAMDDDLNSSGALAVLFDLARPLRALANRLDRG 405

Query: 384 ------------------IFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLK 421
                             +    A +LG+ +     N       S AIE  ++ R +  +
Sbjct: 406 DAPTHSDDEGRGLQQRWLLLRELAGVLGLRLEHPSGNDTETDLDSQAIEAAIEARRMAKQ 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            K F+ AD IR +L ++G  L D         +T W++
Sbjct: 466 SKDFAEADRIRAELTAQGIELIDKPGG-----ITEWRR 498


>gi|262384651|ref|ZP_06077784.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
 gi|262293632|gb|EEY81567.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
          Length = 491

 Score =  521 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 159/491 (32%), Positives = 236/491 (48%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S R I++ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSGRNIEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLEQF 297

Query: 292 LETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                   +  + A  IR  +L  HYR  +DF+ + L  AE  LS+  +           
Sbjct: 298 FTGDHASLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHLMKLKPS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
              +     +      A+ +DLN+   I  L  +AR      D     +           
Sbjct: 358 ATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDVARTINSVKDGKATLSEEDLKELQEVF 417

Query: 388 ---SAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++        N    S A++ L+  R      K ++++D IR +L + GF 
Sbjct: 418 HLFLFDILGMKDEASASGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNELTAMGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGAEWK 488


>gi|254456599|ref|ZP_05070028.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083601|gb|EDZ61027.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 449

 Score =  521 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 189/470 (40%), Positives = 269/470 (57%), Gaps = 31/470 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I + N L  K  +F  +D  NI MYVCGPTVYD  HIGNARP+++FD+L+++L+  
Sbjct: 1   MGNDIFLTNNLSNKKEKFVPLDEKNIGMYVCGPTVYDDPHIGNARPIVIFDILFKVLKKK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    VTYVRNITD+DDKII+ ++++      N +IS +T    + F +D   L C  P+
Sbjct: 61  FSN--VTYVRNITDVDDKIIKSSKEK------NISISDLTQTVIKSFNEDCNYLNCENPS 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            QP+AT HI  MI +I  +I  G AYE N  + F+     +YG  S +K+++   G+R+ 
Sbjct: 113 QQPKATEHIDLMIEMISELIKKGFAYENNQHVYFEVKKFDDYGKLSNKKLEDLIAGSRIE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKN  DF+LWK S   EP W+SPWG+GRPGWH+ECSAMS  +LG  FDIHGGG+DL
Sbjct: 173 VSDNKKNSEDFVLWKPSLDNEPAWDSPWGKGRPGWHLECSAMSKKFLGNEFDIHGGGIDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  AN W+HN F+ +   KM+KS GN + I +          
Sbjct: 233 IFPHHENEIAQSRCANDTDVFANYWLHNAFITMSNEKMAKSQGNILKIKDFRN------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAVLSALYNDL 359
                V+RLA++  HY++P+D+  + L + +  + KW      S   +D  ++  LY+D+
Sbjct: 286 KVSGQVLRLALISAHYKQPLDWNDKLLEDCQNTIDKWYNVYLPSDNDLDEEIIQPLYDDI 345

Query: 360 NTVSAIQALHKLARESTKNHDL-LPIFNASAHILGIEVC--------KEHLNKNISIAIE 410
           NT   I  LHKL  ++ K  +    IFN++ + +G+           K+         IE
Sbjct: 346 NTPGYIANLHKLYDKANKGDEKDKQIFNSACNFIGLLQETKEVWLNHKKDKIDISEEEIE 405

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +Q R      K +  AD IR  L  KG ++ED K+       T WK K
Sbjct: 406 NKIQLRNTARANKDYKEADNIRDYLLDKGVLIED-KDGK-----TIWKFK 449


>gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 473

 Score =  521 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 267/488 (54%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWN--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L CLAP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +  +            +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQKTTETLDQSFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALSLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|325829816|ref|ZP_08163274.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325487983|gb|EGC90420.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 501

 Score =  521 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 180/516 (34%), Positives = 253/516 (49%), Gaps = 84/516 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT  R   +F+ ++   + MYVCGPTVY++ HIGNAR  I FDV+ R L +   + 
Sbjct: 2   IRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII ++ +E        + + + ++ T+ F++D      L P  +P+
Sbjct: 61  -VTFVQNVTDVDDKIIGKSLEE------GRSAAEVAAEYTEAFIEDMRAAGVLDPDIRPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----- 179
           AT  IP MI LIQ +I  GHAY+A+ ++ F+  S P YG  S R +DE + G R      
Sbjct: 114 ATEEIPAMIELIQELIDGGHAYDADGDVYFNVRSFPAYGELSGRNVDEMESGHRELRADG 173

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              +  K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FDIHGGG 
Sbjct: 174 KGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGWHIECSAMSRKYLGLPFDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQS  A      AN W+H G L +   KMSKS GNF  + ++L      
Sbjct: 234 DLVFPHHENERAQSEAACGC-TFANYWMHGGMLQINSEKMSKSLGNFKLLRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
            +     V+R  ML THYR P+DF+ +RL EA   L +      +               
Sbjct: 287 -KVTDPKVLRFLMLQTHYRSPLDFSDERLAEAGAALCRIENAVKNLDWQLQNAQDIPSPL 345

Query: 346 ----------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------HDL 381
                         A + A+ +D NT  A+  +                         D 
Sbjct: 346 DTRELMKRTKEAKLAFILAMDDDFNTCKALGEVFDFVAAVNAQTADKTISLSDVPPVRDA 405

Query: 382 LPIFNASAHILGIEVC----------------------KEHLNKNISIAIEKLVQERLIL 419
             +      + GI+V                         +   + + A++ L+  R   
Sbjct: 406 RGVIVELMGVFGIDVEAASASCAAGGYPPEVVGLAADIAGYEGADAAEAVDALLAARADA 465

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              K +S AD +R  L   GF++ED      G R+T
Sbjct: 466 RAAKDWSRADAVRDGLCGLGFVIEDTP---QGARVT 498


>gi|301308608|ref|ZP_07214561.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
 gi|300833402|gb|EFK64019.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
          Length = 491

 Score =  521 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 157/491 (31%), Positives = 234/491 (47%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S R I++ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSGRNIEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLEQF 297

Query: 292 LETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                   +  + A  IR  +L  HYR  +DF+ + L  AE  LS+  +           
Sbjct: 298 FTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHLMKLQPS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
              +     +      A+ +DLN+   I  L   AR      D     +           
Sbjct: 358 ATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDAARAINSVKDGKATLSEEDLKELQEVF 417

Query: 388 ---SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++          +    A++ L+  R      K ++++D IR +L + GF 
Sbjct: 418 HLFLFDILGMKDEASAGGNSYETFGKAVDLLLSIRQQAKANKDWATSDKIRNELTAMGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGAEWK 488


>gi|329954112|ref|ZP_08295207.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
 gi|328528089|gb|EGF55069.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
          Length = 491

 Score =  521 bits (1343), Expect = e-146,   Method: Composition-based stats.
 Identities = 167/491 (34%), Positives = 248/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVAQYYINRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AYE+   I FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSIYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWKR+ P     W SPW  G PGWH EC+AM   YLGK F
Sbjct: 179 LNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWSDGFPGWHAECTAMGKKYLGKHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQS  A + +   + W+HN  + + G+KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLVFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
              + K   +++    IR  +L  HYR  +DF+ + L  AE  L++          I P 
Sbjct: 298 FTGSNKTLAQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLTRLMDAVHGLEKITPG 357

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                           A+ +DLN+   I  L   AR                  +L   F
Sbjct: 358 KASTVDVKTLRAKCYEAMNDDLNSPIVIAHLFDGARMINNIIAGNDTITAEDLQELKETF 417

Query: 386 NAS-AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +     ILG++      E         ++ L++ER+     K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLKEENNSNEEREAAFGKVVDMLLEERIKAKANKDWATSDKIRDKLTALGFA 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGCEWK 488


>gi|332703611|ref|ZP_08423699.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553760|gb|EGJ50804.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 485

 Score =  521 bits (1342), Expect = e-146,   Method: Composition-based stats.
 Identities = 171/499 (34%), Positives = 246/499 (49%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+   P  + MYVCG T YD  HIG+AR  +VFD+L R LR    E 
Sbjct: 1   MQLYNTLRRKKESFEPRVPGKVSMYVCGITAYDLCHIGHARSAVVFDILVRYLRSTGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN TD+DDKII RA +         +   I  K  + F +D  +L  L    +P+
Sbjct: 60  -VTFIRNFTDVDDKIINRANER------GVSSQEIAEKYIKTFHEDMDKLNVLRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HIP+M+ L   +I    AY+  + ++ F   +   YG  S R ID+ + G R+    
Sbjct: 113 CTEHIPEMLTLTGELIAKDRAYKTLSGDVYFRVRAFEPYGKLSGRDIDDLRAGARITPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWH+ECSAM++ Y+    DIHGGG DLIFP
Sbjct: 173 AKEDPLDFALWKSAKPNEPFWESPWGKGRPGWHLECSAMAAKYVDLPLDIHGGGQDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   E  A  W+HNGF+ +   KMSKS GNF TI ++L+        + 
Sbjct: 233 HHENEIAQTEAATDGE-LARFWVHNGFVQINQEKMSKSLGNFFTIRDILD-------KFM 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
             V+R  +L  HYR P+DF+ + L EAE  L +                          +
Sbjct: 285 PEVLRFFLLGQHYRSPLDFSFESLEEAEKGLRRIYAAMGQMREALQKDKWGKAALPTEIT 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                 + A   A+ +DLNT +A+  +    R + +  D                +L   
Sbjct: 345 DELSTAEKAWDEAMTDDLNTAAALGHVFTAVRLAGRVMDDKAMRKSEGARNFWQRVLDNL 404

Query: 386 NASAHILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
              + + G            +  C+       +  +E L+ +R      K F+S+D IR 
Sbjct: 405 ARWSQVFGVFYSQPQEFLDELRACRARRKGIDTAKVEALLTQRQEARAGKDFASSDAIRD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L + G  ++D        
Sbjct: 465 ELAAMGAEVKDTPQGQTWD 483


>gi|299147030|ref|ZP_07040097.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
 gi|298514915|gb|EFI38797.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
          Length = 493

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 168/493 (34%), Positives = 250/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I PA
Sbjct: 298 FTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP 383
                             A+ +DLNT   I  L + AR                  DL  
Sbjct: 358 SATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKDLKE 417

Query: 384 IFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            F+  +  I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|78186099|ref|YP_374142.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|109894917|sp|Q3B6D2|SYC_PELLD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78166001|gb|ABB23099.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 483

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 160/492 (32%), Positives = 234/492 (47%), Gaps = 49/492 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + I+N+L R+   F+ + P  + +YVCGPTVY  AH+G+A+  + FDV+ R LR    
Sbjct: 1   MPLVIFNSLGREKQLFEPLHPGVVGIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRESGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V YV+NITD+    DD      +    +         I    T+ F+ D  RL  L 
Sbjct: 61  --RVKYVQNITDVGHLSDDADEGEDKIARQARLEKTDPMEIAQFYTRSFLDDMDRLGVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGT 177
           P   P AT HIP+ I L+  ++  GHAYE N  + F   S P YG  S R  +D  + G 
Sbjct: 119 PNISPLATGHIPEQIALVDKLVKRGHAYEVNGNVYFSVESFPGYGKLSGRTDLDAVQSGA 178

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           RV  +  K NP+DF LWK++       W+SPWG G PGWH+ECSAMS  YLG   DIHGG
Sbjct: 179 RVGVRSEKHNPSDFALWKKAEEGHLMQWDSPWGMGYPGWHLECSAMSMKYLGDTIDIHGG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G++  FPHHE EIAQS  A+  +     W+HN  + + G KM KS  N + + E+ +T  
Sbjct: 239 GMENRFPHHECEIAQSEAAN-EKPYVRYWMHNNMVTVNGTKMGKSLKNAVNLKEIFKTV- 296

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDP 349
                     +R  +L +HYR P+D++   +  +   L K  +T           G++D 
Sbjct: 297 ------DPLAVRFFILQSHYRSPLDYSDTAVAGSTAGLQKLRETRQRLIEATPGTGLLDA 350

Query: 350 A-----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------------HI 391
           A        A+ +D NT  AI AL   ++      D     NAS+              +
Sbjct: 351 APFSLRFREAMDDDFNTPVAIAALFDFSKALNTALDRPDGLNASSLEAARELFSTAAVTV 410

Query: 392 LGIEVCKEHLN--------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           LGI                + +   +  L++ R    K K F+++D IR  L + G  ++
Sbjct: 411 LGIMTEDAEGGMHDGGRSAETLDEVMGVLMELRSEARKNKDFATSDLIRDHLLAAGIEIK 470

Query: 444 DYKNPDNGQRMT 455
           D +   +  +  
Sbjct: 471 DTREGASWSKTR 482


>gi|307704342|ref|ZP_07641259.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622102|gb|EFO01122.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 423

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/445 (36%), Positives = 229/445 (51%), Gaps = 39/445 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ H+GNAR  + FD + R   Y   E  V Y+ N TD+DDKII RA++E 
Sbjct: 1   MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE--VAYISNFTDVDDKIINRAKEE- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                      + +K    F +D T L     T  PR    +  +I  ++ +I  G AYE
Sbjct: 58  -----GITPQEVANKYIAAFREDVTALGVKPATRHPRVVEFMADIIRFVEELIEKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPEKYHKKNPADFILWKRSTPMEPGW 204
           +  ++ F      NY   + + +++ ++G       E   K+NP DF LWK + P E  W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEETARKENPVDFALWKAAKPGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           +SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH NEIAQS      +  AN 
Sbjct: 173 DSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANY 231

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+HNGF+N++  KMSKS GNFIT+++ L+T           V+R      HYR+PI+FT 
Sbjct: 232 WMHNGFVNIDNVKMSKSLGNFITVHDALKT-------IDGQVLRFFFATQHYRKPINFTE 284

Query: 325 QRLTEAEILLSKWPQT----------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
           + + +AE  L     T          +          ++A+  D N  + I  + ++A+ 
Sbjct: 285 KAVRDAETNLKYLKNTYEQPFTGNVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAKW 344

Query: 375 STK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                 +  +     A   + GI   +E L+      IE L+Q+R      + F++AD I
Sbjct: 345 INSGNYDASVKEALAAMLEVFGIVFIEEVLD----AEIETLIQKRQEARANRDFATADQI 400

Query: 432 RKQLESKGFILEDYKNPDNGQRMTR 456
           R QL ++G  L D K+   G R TR
Sbjct: 401 RDQLAAQGIKLLDTKD---GVRWTR 422


>gi|257791977|ref|YP_003182583.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|317489986|ref|ZP_07948478.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|257475874|gb|ACV56194.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|316910984|gb|EFV32601.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 501

 Score =  521 bits (1342), Expect = e-145,   Method: Composition-based stats.
 Identities = 180/516 (34%), Positives = 253/516 (49%), Gaps = 84/516 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT  R   +F+ ++   + MYVCGPTVY++ HIGNAR  I FDV+ R L +   + 
Sbjct: 2   IRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII ++ +E        + + + ++ T+ F++D      L P  +P+
Sbjct: 61  -VTFVQNVTDVDDKIIGKSLEE------GRSAAEVAAEYTEAFIEDMRAAGVLDPDIRPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----- 179
           AT  IP MI LIQ +I  GHAY+A+ ++ F+  S P YG  S R +DE + G R      
Sbjct: 114 ATEEIPAMIELIQELIDGGHAYDADGDVYFNVRSFPAYGELSGRNVDEMESGHRELRADG 173

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              +  K++P DF LWK + P EP WESPWG GRPGWHIECSAMS  YLG  FDIHGGG 
Sbjct: 174 KGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGWHIECSAMSRKYLGLPFDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQS  A      AN W+H G L +   KMSKS GNF  + ++L      
Sbjct: 234 DLVFPHHENERAQSEAACGC-TFANYWMHGGMLQINSEKMSKSLGNFKLLRDVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
            +     V+R  ML THYR P+DF+ +RL EA   L +      +               
Sbjct: 287 -KVTDPKVLRFLMLQTHYRSPLDFSDERLAEAGAALCRIENAVKNLDWQLQNAQDIPSPL 345

Query: 346 ----------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------HDL 381
                         A + A+ +D NT  A+  +                         D 
Sbjct: 346 DTRELMKRTKEAKLAFILAMDDDFNTCKALGEVFDFVAAVNAQTADRTISLSDVPPVRDA 405

Query: 382 LPIFNASAHILGIEVC----------------------KEHLNKNISIAIEKLVQERLIL 419
             +      + GI+V                         +   + + A++ L+  R   
Sbjct: 406 RGVIVELMGVFGIDVEAASASCAAGGYPPEVVGLAADIAGYEGADAAEAVDALLAARADA 465

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
              K +S AD +R  L   GF++ED      G R+T
Sbjct: 466 RAAKDWSRADAVRDGLCGLGFVIEDTP---QGARVT 498


>gi|296114670|ref|ZP_06833322.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978766|gb|EFG85492.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 471

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 187/479 (39%), Positives = 263/479 (54%), Gaps = 43/479 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R    F   DP+ + MYVCGPTVY++AH+GNAR  +VFD+LYR+LR+ YG
Sbjct: 12  HPLRLTNTLSRSKQIFVPRDPNRVTMYVCGPTVYNYAHLGNARSAVVFDLLYRILRHSYG 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RN TD+DDKI   A      +     I  IT +    +  D   L  L P  +
Sbjct: 72  --RVLYARNFTDVDDKINAEA------VRTGQPIGAITDRFISAYHADMAALGVLRPDFE 123

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+  +I LI  ++  GHAY+A   ++F   S  +YG  S R  ++   G RV   
Sbjct: 124 PRVTEHLSDIIALIDRLLEAGHAYQAAGHVLFHVPSFADYGRLSGRSREDVIAGARVEVA 183

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++PADF+LWK S+   PGWESPWGRGRPGWHIECSAM+ H LG   D+HGGG DLIF
Sbjct: 184 PFKRDPADFVLWKPSSDDAPGWESPWGRGRPGWHIECSAMTEHCLGLPIDLHGGGQDLIF 243

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A       + W+HNGF+ ++GRKMSKS GN +  ++LLE         
Sbjct: 244 PHHENEIAQSVSARDGAAYCDFWVHNGFVTVDGRKMSKSLGNVVLAHDLLERH------- 296

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
               IRLA+L  HYR+P+D++ + LTE+   LS+  +        D            V+
Sbjct: 297 DGQTIRLALLSAHYRQPLDWSDKLLTESGRALSRLKRLIADTASSDHDACAVPIVRNRVV 356

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGI------EVCKEH 400
            AL +DLNT +A+ AL  +ARE      +            +  +LG+      +   + 
Sbjct: 357 QALADDLNTPAAMTALFSIARELRHADHVAERSRLRRELVEAVTLLGLKHDSPPDCLSQG 416

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            ++  + A+ ++V +R +  + K +  AD +R  L  KG +L+D          TRW++
Sbjct: 417 TDETSNAALAEMVAQRDVARRRKDYQEADILRDALLLKGVVLDDT------HEGTRWRR 469


>gi|256842437|ref|ZP_05547940.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
 gi|256736044|gb|EEU49375.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
          Length = 491

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 158/491 (32%), Positives = 234/491 (47%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S R I++ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSGRNIEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLEQF 297

Query: 292 LETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                   +  + A  IR  +L  HYR  +DF+ + L  AE  LS+  +           
Sbjct: 298 FTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHLMKLQPS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
              +     +      A+ +DLN+   I  L    R      D     +           
Sbjct: 358 ATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDLKELQEVF 417

Query: 388 ---SAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++        N    S A++ L+  R      K ++++D IR +L + GF 
Sbjct: 418 HLFLFDILGMKDEASASGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNELTAMGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGAEWK 488


>gi|269124972|ref|YP_003298342.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
 gi|268309930|gb|ACY96304.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
          Length = 465

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 165/486 (33%), Positives = 244/486 (50%), Gaps = 51/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R +  F+ +    + MYVCG T     HIG+ R  +++DVL R LR+   
Sbjct: 1   MSLHLYDTGTRTVRPFKPLHEGRVGMYVCGATPQAEPHIGHLRSGVIYDVLLRWLRHSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+VRN+TD+DDKII  A +             +   N + F +    L CL PT +
Sbjct: 61  E--VTFVRNVTDVDDKIIAAAAERGVPWF------ALAEANQRIFTRGYELLGCLPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+P+MI LI+ ++  GHAY A  ++ FD +S   +YG  S ++++  +     P 
Sbjct: 113 PRATGHVPEMIVLIRRLLEAGHAYTAAGDVYFDVNSWAEHYGELSHQRLEHMRPAGDTPN 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  K++P DF LWK + P EP WE+PWG GRPGWH+ECS MS+ YLG  FDIHGGG+DLI
Sbjct: 173 EDAKRDPRDFALWKGAKPGEPSWETPWGEGRPGWHLECSVMSTKYLGPTFDIHGGGVDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS  A      A  W+HNG L ++G KMSKS GN + + +LLE  +     
Sbjct: 233 FPHHENERAQSQAAGDG--FARYWLHNGLLTVDGVKMSKSIGNVVLLTDLLEKAR----- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAV 351
                +R  +   HYR  +D+T   L EA     +     T              +  A 
Sbjct: 286 --PVEVRYYLASAHYRSLMDYTDGSLAEAVTAYQRIEGFVTRAAELVGAGEPAAELPEAF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN 402
            +A+ +DL    A+  LH+  R+                L        +LG++   E   
Sbjct: 344 TAAMNDDLGVPQALAVLHETVRDGNSALASGDRAEVARRLASVRGMMGVLGLDPLAEPWA 403

Query: 403 KN--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            +        +   ++  +++R      K +++AD IR  L + G ++ED  +       
Sbjct: 404 DDRGSDLRPVVDALVKVALEQRQAARARKDYAAADEIRDSLAAAGIVVEDTPHGP----- 458

Query: 455 TRWKQK 460
            RW+ K
Sbjct: 459 -RWELK 463


>gi|285018667|ref|YP_003376378.1| cysteinyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283473885|emb|CBA16387.1| probable cysteinyl-trna synthetase protein [Xanthomonas
           albilineans]
          Length = 466

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 184/486 (37%), Positives = 260/486 (53%), Gaps = 48/486 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           M  ++++YN L R++  F+ +DP +    YVCGPTVY++AHIGNAR  +VFDVL +    
Sbjct: 1   MPMRLRLYNNLTRQLDAFEPLDPHAGPTFYVCGPTVYNYAHIGNARGPVVFDVLAK--LL 58

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
                 + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L    P
Sbjct: 59  RRRYGRLRYARNITDVDDKINAAAQAQGVPI------SAITDRFAAIYRQDMAALGVAPP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             +P+AT HIPQ++ +IQ +I +GHAY A   ++F  +S  +YG  SRR  +E   G RV
Sbjct: 113 DIEPQATTHIPQIVAMIQRLIDNGHAYPAEGHVLFAVASFADYGKLSRRDPEELLAGARV 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG+  DIH GG+D
Sbjct: 173 DVAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS CA      A  W+HNG L   G KMSKS GN  T++EL+       
Sbjct: 233 LQFPHHENEIAQSQCAHGGATFARFWLHNGMLTFSGAKMSKSLGNIETVHELIAKH---- 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLS 353
              P   +R A+L  HYR+P+D++   +T+++  L +   T        ++  I   V  
Sbjct: 289 ---PPEALRYALLSAHYRQPLDWSEALITQSKNTLDRLYGTLRDLSGYSAEPDIPAEVDI 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIF-----NASAHILGI-------------- 394
           AL +DLNT  A+  L  LA  +                  AH+                 
Sbjct: 346 ALDDDLNTPKALAELSALASRARTLLSKPEHIGPAEHAELAHVKANLLGAGLALGLLQQD 405

Query: 395 -EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             V  +  +     +I+ L+ ER    + + F+ AD IR+QL   G +LED        +
Sbjct: 406 PNVWFQGADNADDASIQALIDERSAAKQRRDFARADAIRQQLADTGIVLEDT------PQ 459

Query: 454 MTRWKQ 459
             RWK+
Sbjct: 460 GIRWKR 465


>gi|189465034|ref|ZP_03013819.1| hypothetical protein BACINT_01378 [Bacteroides intestinalis DSM
           17393]
 gi|189437308|gb|EDV06293.1| hypothetical protein BACINT_01378 [Bacteroides intestinalis DSM
           17393]
          Length = 491

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 164/491 (33%), Positives = 242/491 (49%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVAQYYINRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AY +   + FD         YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEILKNGYAYVSEGSVYFDVEKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQAEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHAECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A +     + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGNDMVHYWMHNNMITINGQKMGKSYGNFINLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  AE  L +          I P+
Sbjct: 298 FNGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLGRMMDAVNGLEKITPS 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF 385
                           A+ +DLNT   I  L   AR                  DL   F
Sbjct: 358 ATSSVDVKAVREKCYEAMNDDLNTPIVIAHLFDGARMINNIIAGNDTITAEDLKDLKETF 417

Query: 386 NAS-AHILGIEVCKEHLNK---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +     ILG++   +   +        ++ L+++R++    K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLKEENDSNEEREVAFGKVVDMLLEQRMMAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K     +
Sbjct: 478 IKDGKEGSEWK 488


>gi|295086168|emb|CBK67691.1| cysteinyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
          Length = 493

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 167/493 (33%), Positives = 249/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I PA
Sbjct: 298 FTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFN 386
                             A+ +DLNT   I  L + AR               DL  +  
Sbjct: 358 PATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKELKE 417

Query: 387 AS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|148269355|ref|YP_001243815.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170288013|ref|YP_001738251.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|281411948|ref|YP_003346027.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|229558798|sp|A5IJ66|SYC_THEP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229558801|sp|B1L7Y7|SYC_THESQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|147734899|gb|ABQ46239.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|170175516|gb|ACB08568.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|281373051|gb|ADA66613.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 460

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 164/472 (34%), Positives = 238/472 (50%), Gaps = 42/472 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I NTL  K  EF  I P  +RMYVCGPTVYD  H+GNARP +VFDV  R L Y     
Sbjct: 1   MRITNTLTGKKEEFVPIQPGVVRMYVCGPTVYDLIHVGNARPAVVFDVFRRYLEYRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TDIDDKII +A Q      +      +      ++ +D   L        PR
Sbjct: 59  RVIMVQNFTDIDDKIINKANQ------LGVDYKTVADTFIAEYWRDAHALGIRPANFHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  ++ +I+ ++  G AY+    + FD      YG  S++KI++   G RV     
Sbjct: 113 TTDFVDDIVEIIERLVEKGVAYQTETGVYFDVRKFEKYGELSKKKIEDLIAGARVEVDET 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF LWK++ P EP W+SPWG GRPGWHIEC+ MS   LG+ FDIH GG DL+FPH
Sbjct: 173 KKFPLDFSLWKKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A  W+HNG +   G KMSKS GN  T+ E +       + +  
Sbjct: 233 HENEKAQAEALTG-KVFARYWMHNGMVRFLGDKMSKSTGNIFTVREAV-------KRYGR 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDP 349
             +R  +L  HYR P+DF+ + L +    + +                P+ +        
Sbjct: 285 DGLRYMILSKHYRSPMDFSEELLQDYSRAVKRVWEILGRYEKSGDIGIPKRNAVYEEYVN 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------ILGI-EVCK 398
             + AL +D NT  A+  + +LAR  +K  D     +A  +          +LG+ ++ +
Sbjct: 345 RFVEALDDDFNTPVAVSLIFELARNLSKAMDDNDREDALLYYHLIRREFGPVLGLFDLNE 404

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           E    +    ++ L++ R +L K K++  +D IR  L   G IL+D  +   
Sbjct: 405 EKKEVSSEELLKLLIEVRDVLRKEKRYDLSDRIRDHLREIGIILKDTPSGTE 456


>gi|298480481|ref|ZP_06998678.1| cysteine--tRNA ligase [Bacteroides sp. D22]
 gi|298273302|gb|EFI14866.1| cysteine--tRNA ligase [Bacteroides sp. D22]
          Length = 493

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 167/493 (33%), Positives = 249/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I PA
Sbjct: 298 FNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFN 386
                             A+ +DLNT   I  L + AR               DL  +  
Sbjct: 358 PATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKELKE 417

Query: 387 AS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|237720477|ref|ZP_04550958.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
 gi|229450228|gb|EEO56019.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
          Length = 493

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 168/493 (34%), Positives = 250/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I PA
Sbjct: 298 FTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP 383
                             A+ +DLNT   I  L + AR                  DL  
Sbjct: 358 SATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKDLKE 417

Query: 384 IFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            F+  +  I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDKIRNALTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|332097289|gb|EGJ02270.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 435

 Score =  520 bits (1341), Expect = e-145,   Method: Composition-based stats.
 Identities = 168/456 (36%), Positives = 243/456 (53%), Gaps = 48/456 (10%)

Query: 31  CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
           CG TVYD  HIG+ R  + FDV+ R LR+   +  + YVRNITDIDDKII+RA +     
Sbjct: 2   CGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK--LKYVRNITDIDDKIIKRANEN---- 55

Query: 91  PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN- 149
              ++   +  +   +  KD   L  L P  +PRAT+HI ++I L + +I  GHAY A+ 
Sbjct: 56  --GESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHITEIIELTEQLIAKGHAYVADN 113

Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
            +++FD  + P YG  SR+ +D+ + G RV     K+NP DF+LWK S   EP W SPWG
Sbjct: 114 GDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWG 173

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAM+   LG  FDIHGGG DL+FPHHENEIAQS CA    +  N W+H+G
Sbjct: 174 AGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDG-QYVNYWMHSG 232

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            + ++  KMSKS GNF T+ ++L       + + A  +R  ++  HYR  ++++ + L +
Sbjct: 233 MVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEENLKQ 285

Query: 330 AEILLSKWPQ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST--KN 378
           A   L +                    +   + A+ +D NT  A   L  +ARE    K 
Sbjct: 286 ARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKA 345

Query: 379 HDLLPI------FNASAHILGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKK 424
            D+             + +LG+   +           + +    IE L+Q+RL   K K 
Sbjct: 346 EDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKD 405

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +++AD  R +L   G +LED      G + T W++K
Sbjct: 406 WAAADAARDRLNEMGIVLED------GPQGTTWRRK 435


>gi|160883992|ref|ZP_02064995.1| hypothetical protein BACOVA_01966 [Bacteroides ovatus ATCC 8483]
 gi|156110722|gb|EDO12467.1| hypothetical protein BACOVA_01966 [Bacteroides ovatus ATCC 8483]
          Length = 493

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 167/493 (33%), Positives = 250/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I P+
Sbjct: 298 FTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITPS 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP 383
                             A+ +DLNT   I  L + AR                  DL  
Sbjct: 358 STTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKDLKE 417

Query: 384 IFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            F+  +  I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|293368873|ref|ZP_06615476.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
 gi|292636022|gb|EFF54511.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
          Length = 493

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 168/493 (34%), Positives = 250/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFIPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I PA
Sbjct: 298 FTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP 383
                             A+ +DLNT   I  L + AR                  DL  
Sbjct: 358 SATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKDLKE 417

Query: 384 IFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            F+  +  I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDKIRNALTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|237716747|ref|ZP_04547228.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262405523|ref|ZP_06082073.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|294646338|ref|ZP_06723985.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294806673|ref|ZP_06765504.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
 gi|229442730|gb|EEO48521.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
 gi|262356398|gb|EEZ05488.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
 gi|292638293|gb|EFF56664.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
 gi|294446093|gb|EFG14729.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
          Length = 493

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 167/493 (33%), Positives = 249/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +      +YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +   I PA
Sbjct: 298 FNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLIEAIDALDKITPA 357

Query: 351 ---------------VLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFN 386
                             A+ +DLNT   I  L + AR               DL  +  
Sbjct: 358 PATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKELKE 417

Query: 387 AS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|221124448|ref|XP_002165201.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 458

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 176/477 (36%), Positives = 245/477 (51%), Gaps = 43/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I+NTL R +  F  I+P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+    
Sbjct: 1   MSLRIFNTLTRSLQPFTPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASG- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +     I  +T +       D   L    P+ +
Sbjct: 60  -MQVTYVRNITDIDDKIIRRA------VERGITIRQLTDEMIAAMHADIGALHIEPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ LI  +   G AY A N ++ +       YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLSLIGELEAKGLAYRASNGDVNYSVRKFEGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK + P EP    WES +G GRPGWHIECSAMS   LG  FDIHGGG 
Sbjct: 173 LDGKEDPLDFVLWKSAKPEEPPEAKWESVFGTGRPGWHIECSAMSCATLGTTFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+HNGF+ ++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGAHG-QALANFWMHNGFVRVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
            R + A  +R  ++  HYR  ++++   L +A   L +     +     D          
Sbjct: 286 -RQYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSQVQATDISIDWSNPFA 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEHL----- 401
               +A+  D  T  A+  L  LA E  ++   +   +  A    LG+     +      
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSVEAASLLKALGACLGLLQADANAYLQSG 404

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                  I++ + +R      K F+ AD IRK L ++G +L+D          T W+
Sbjct: 405 AGLDEATIQQRIADRAAAKAAKDFALADAIRKDLLAQGIVLKDSAA------GTTWE 455


>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 485

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 180/499 (36%), Positives = 252/499 (50%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN++ R+  EF       I +YVCG T YD+ HIG+AR  +VFDVL R  R      
Sbjct: 1   MQLYNSMTRQKEEFIPQTSGEISLYVCGITAYDYCHIGHARAAVVFDVLVRYFRDQNF-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TD+DDKII+RA +EH           +  K    + +D  RL       +P+
Sbjct: 59  AVHFVRNFTDVDDKIIKRAAEEHLEA------DEVAQKYIAAYYEDMERLGVQPANFEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI  MI L +N+I  GHAY  A+ ++ F   S+P+YGS S R++D  + G R+    
Sbjct: 113 ATEHIQDMIGLAENLIAKGHAYATASGDVYFRVRSLPSYGSLSGRELDTMRAGARIAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWKR+ P EP W SPWG GRPGWH+ECSAMS  +LG   DIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKRAKPEEPSWPSPWGNGRPGWHLECSAMSERFLGLPLDIHGGGQDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS  A   E  A  W+HNGF+ +E  KMSKS GNFITI ++L         + 
Sbjct: 233 HHENERAQSLAASGKE-LARFWVHNGFVQVEAEKMSKSLGNFITIRDILS-------YYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
             V+R  ++  HYR P+DF  + + EAE  L +  QT                      S
Sbjct: 285 PEVLRYFLVTKHYRSPLDFNWEVMDEAEKGLRRLYQTRQHIAEALSRSNWSKTELPSELS 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
                +D      + +DLNT  A+  +  L R + +  +                +  IF
Sbjct: 345 AEIDDLDAKWRQNMEDDLNTAGALGHVFTLNRLANRILEDKTWRKAEAGGKLLERIQSIF 404

Query: 386 NASAHILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
               ++LG            +   K       + A+ +L+ +R    + K F++AD +R+
Sbjct: 405 EHIGNVLGLFQQTPDAFLDDLRTQKAKRKGIDTSAVAQLITKRQEARRAKDFTTADSVRQ 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           QLE  G  ++D        
Sbjct: 465 QLEEMGIEVQDTPQGPVWD 483


>gi|84503361|ref|ZP_01001430.1| cysteinyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84388271|gb|EAQ01222.1| cysteinyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 477

 Score =  520 bits (1340), Expect = e-145,   Method: Composition-based stats.
 Identities = 202/476 (42%), Positives = 273/476 (57%), Gaps = 46/476 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ N+  R+   F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG 
Sbjct: 3   EIRLTNSKTRRKEVFAPIDPENVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VTYVRN TD+DDKI  RA ++        AI  IT +    + +D   L  L PTH+P
Sbjct: 63  EAVTYVRNFTDVDDKINARAERD------GRAIREITDETIGWYHQDMEALGTLRPTHEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+HIPQM+ +I+ +I  GHAY A   ++F   S  +YG+ S R +++   G RV    
Sbjct: 117 RATDHIPQMVAMIEGLIASGHAYAAEGHVLFSVDSYADYGALSGRSVEDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   LG  FDIHGGG+DL FP
Sbjct: 177 YKRNPMDFVLWKPSPGDLPGWDSPWGRGRPGWHIECSAMADELLGPSFDIHGGGIDLQFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      AN+W+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 237 HHENEIAQSCCARPEGGFANVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---PAVLSALYNDLN 360
             VIR   L THYR  +D+T ++  +A+  L  W + ++          +V+  L NDLN
Sbjct: 291 GEVIRFVFLGTHYRNNMDWTEEKSQQAKETLKAWFRLTSGVESDPYGLTSVVPYLANDLN 350

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL-NKNISIAIE--------- 410
           T   +  L  LA      HD      A+   +G+E   +     ++S  I+         
Sbjct: 351 TPGVLHELRNLA-----QHDAAGQLKAAMEFIGLEASGDWWVPGSVSKEIDGFVSHVSWS 405

Query: 411 ----------------KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                            L++ R+  +K K FSS D ++  L + G  +   K    
Sbjct: 406 GDLDPNVESRLSEISAALLRARIQAMKTKDFSSVDEMKAYLVAAGVEVRMSKEGVE 461


>gi|257095793|ref|YP_003169434.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048317|gb|ACV37505.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 465

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 197/480 (41%), Positives = 271/480 (56%), Gaps = 45/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+++NTL R+   F   DP  + MYVCGPTVY++ HIGNARP++VFDVLYRLL  +Y 
Sbjct: 1   MSIRLHNTLTRQKDVFMPADPQRVTMYVCGPTVYNYVHIGNARPVVVFDVLYRLLSRHY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y RNITD+DDKI   A          + I I+  +    + +D T+L  L PT +
Sbjct: 60  -PQVIYARNITDVDDKINAAAAAN------GEPIRILAERYATAYREDMTQLNALPPTIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT HIPQMI LI+ +I   HAY A   ++F   S+P+YG  S R+ D+   G RV   
Sbjct: 113 PWATGHIPQMIALIERLIERSHAYVAEGHVLFHVPSLPDYGKLSGRQRDDMIAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++PADF+LWK ST  +PGW SPWG GRPGWH+EC+AM   +LG   DIHGGG DLIF
Sbjct: 173 PYKRDPADFVLWKPSTAAQPGWHSPWGFGRPGWHMECTAMIHTHLGPSIDIHGGGQDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ   A+   +    W+HNG++ ++G KMSKS GNF T+ +LL       + +
Sbjct: 233 PHHENEIAQGEGANGG-QYCRYWLHNGYVTVDGEKMSKSLGNFRTVRDLL-------QYY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
           P  VIR A+L  HYR+P+DF++  L +A   L +   +       DP        AV +A
Sbjct: 285 PGEVIRYALLAGHYRKPLDFSLSALDQARAALDRLYGSLQPFAAPDPAPEGVRAEAVEAA 344

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI---------EVCKE 399
           L +DLNT  A+  LH+ A    K  D      LL     +A +LG+         +  + 
Sbjct: 345 LADDLNTPLALGCLHEAATALRKCTDPAEQSRLLATLRDAADLLGLLQQNPATWRQQARA 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N   +  IE+L+  R +    + F+ AD +R++L + G  +ED          T W +
Sbjct: 405 QDNCPATETIEQLIAARRVARARRDFARADELRQELLTLGIGIEDSAT------GTSWHR 458


>gi|312144267|ref|YP_003995713.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904918|gb|ADQ15359.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 484

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 180/498 (36%), Positives = 245/498 (49%), Gaps = 67/498 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL  K  +F+ ++P  +RMYVCG TV +++HIG+ R  I +DV+ R L Y   E 
Sbjct: 2   LKVYNTLNNKKEKFETVEPGLVRMYVCGLTVQNYSHIGHIRSAINYDVIRRYLEYSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TDI++KI++RA +E          + +  K    F++D       A     R
Sbjct: 61  -VEYISNFTDINEKIVKRAEEE------GMTAAELADKYANAFLEDIRSFNIKAADQYLR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + +I ++I ++  +I  G+AYE N ++ F   S  +YG  S R I++ + G R+     
Sbjct: 114 VSENIDEIIEMVSKLIEKGYAYEINGDVYFSVDSFEDYGKLSGRSIEDMQAGARIAVNED 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+    E GW+SPWG G PGWHIECSAMS   LG  FDIHGGG+DLIFPH
Sbjct: 174 KKNPLDFALWKKVEAGE-GWDSPWGEGWPGWHIECSAMSMKRLGATFDIHGGGVDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     W+HNG +NL G KMSKS GNF T  E+L       + + A
Sbjct: 233 HENEIAQSEAYSGQK-FVKYWLHNGTVNLSGEKMSKSQGNFFTSREVL-------KEFSA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            VIR  +L  HYR PIDF+ ++L EA+  L +   T                        
Sbjct: 285 QVIRYFLLTRHYRSPIDFSYEKLEEAQTSLQRLTNTRQELAKVLSGDIESSTGDRLDKDF 344

Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------- 384
                 I      AL +D NT  AI  LH    E     +                    
Sbjct: 345 LKKTKEIRAEFKKALDDDFNTAEAIGVLHDFVGEINSYINRSEFTLNEKNFSVLEESEEL 404

Query: 385 FNASAHILGIEV----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           F   A ILG++      K   +  +   IE L++ R        +  ADYIR QL+  G 
Sbjct: 405 FLELADILGLKFSVEKSKTKNDGFVEPLIELLLELRQKARDKNDWEEADYIRDQLKEIGI 464

Query: 441 ILEDYKNPDNGQRMTRWK 458
            + D       QR T W+
Sbjct: 465 EVIDT------QRGTEWE 476


>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 473

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 267/488 (54%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWN--V 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L C AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCAAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGSAYPAANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQMYGQTTTETLDQSFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+      +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVDD 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|229815837|ref|ZP_04446161.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
           13280]
 gi|229808532|gb|EEP44310.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
           13280]
          Length = 532

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 179/501 (35%), Positives = 253/501 (50%), Gaps = 70/501 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIYN+   +  +F+ I+   +RMYVCGPTVYD  HIGNAR  I FDV+ R L    
Sbjct: 42  EIPMKIYNSATHQKEDFRPIEEGKVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASG 101

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VT+ +N+TD+DDKII RA ++            + ++ + +F+        L P  
Sbjct: 102 YE--VTFAQNLTDVDDKIINRANEQ------GRTAEEVATEFSDKFIGVMRAANVLDPDV 153

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PRAT  I  MI +I+ +I  GHAY A+  ++ F   S P+YG  S R ID+  +G R+ 
Sbjct: 154 RPRATKEIGAMIGMIKTLIEGGHAYAADNGDVYFSVRSDPSYGEVSGRNIDDLMVGARIE 213

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF LWK + P EP W+SPWG GRPGWH EC+AM   YLG   DIHGGG DL
Sbjct: 214 ENEDKRDPLDFALWKAAKPGEPSWKSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDL 273

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQ+ CA   E  AN W+H G L ++G KMSKS GNF T+ E+LE       
Sbjct: 274 AFPHHENECAQATCAWH-EGFANTWMHTGMLLVDGEKMSKSLGNFFTLAEVLEKH----- 327

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDPAVL 352
              A  +RL ML THYR P+DF+ +RL  AE  L++              ++G  +  + 
Sbjct: 328 --SAAALRLLMLQTHYRSPLDFSWERLEGAENSLARIAGTCRNLKWAADHAEGEPNAELA 385

Query: 353 SA---------------LYNDLNTVSAIQALHKLARESTKNHDL-------------LPI 384
            A               + +D NT  A+ A  +L  E+ K  +                +
Sbjct: 386 DALTAAMEKAAADYEACMDDDFNTAGAVAAYFQLVTEANKYLEQAAGAVDEGAARVCAAV 445

Query: 385 FNASAHILGIEV-----------------CKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
            + +   LG+++                        ++  A E ++  R      K + +
Sbjct: 446 ISGALAQLGVKLPVIEEPLPAELAGVAAELVGFEGDDVDAAAEAILSARAEARAAKDWGT 505

Query: 428 ADYIRKQLESKGFILEDYKNP 448
           AD IR +L+  G  +ED    
Sbjct: 506 ADAIRDRLKELGLAIEDTAAG 526


>gi|218258486|ref|ZP_03474853.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225458|gb|EEC98108.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
           DSM 18315]
          Length = 492

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 164/492 (33%), Positives = 240/492 (48%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLSIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHRAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD        NYG  S R ID+ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESEGSVYFDVEKYNKDHNYGVLSGRNIDDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NP DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKHNPIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + E   + W+HN  + + G+KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGEDMVHYWMHNNMITINGQKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                K   +++    IR  +L  HYR  +DF+ + L  AE  L +              
Sbjct: 298 FTGDNKMLSQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLMDAYHHLMKLKAA 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIF 385
              +     +      A+ +DLN+   I  L   AR      D            L  +F
Sbjct: 358 DVSTVDVKDLRRKCYDAMNDDLNSPIVIAHLFDAARTINSVKDGKATISLEDLKELQDVF 417

Query: 386 NAS-AHILGIEVCKEHL----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +     ILG++          N+    A++ L+  R      K ++++D IR +L + GF
Sbjct: 418 HTFIFDILGMKDEAASAGNNSNEAFGKAMDLLLTIRQQAKANKDWATSDKIRNELTAIGF 477

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 478 EIKDTKDGAEWK 489


>gi|33240685|ref|NP_875627.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|61216289|sp|Q7VB63|SYC_PROMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33238213|gb|AAQ00280.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 499

 Score =  520 bits (1339), Expect = e-145,   Method: Composition-based stats.
 Identities = 178/516 (34%), Positives = 254/516 (49%), Gaps = 81/516 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ NTL R+   F ++ P  + +Y CG TVYD  H+G+AR  IV+DVL R       
Sbjct: 1   MPLKLTNTLTRRTETFSSLKPGEVSIYCCGVTVYDLCHLGHARSYIVWDVLRRYFIAQGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V+N TDIDDKI+ RA +E      N  ++ ++ +N ++F +D   L  L P   
Sbjct: 61  K--VKFVQNFTDIDDKILARASKE------NCTMNEVSERNIEEFHRDMDALGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  + ++  +I+ +   G AY A  ++ F      NYG  S+R + EQ++       
Sbjct: 113 PRATRCLEEIKSMIEELEKKGAAYSAEGDVYFAVMKHANYGKLSKRDLSEQQLNADGRVT 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K+NP DF LWK +   E  + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DKEEARKQNPFDFALWKAAKEGEQSFPSPWGAGRPGWHIECSAMVLQELGETIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A+  +K A  W+HNG +N+ G+KMSKS GNF TI  LL+     
Sbjct: 233 DLIFPHHENEIAQSEVANG-KKLAKYWLHNGMVNVGGQKMSKSLGNFTTIRALLK----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTST 342
                A  +RL +L  HYR+P+DFT + L  A     +                WP+ + 
Sbjct: 287 -EGISAMTLRLFILQAHYRKPLDFTKESLDAASTGWKRLNVILCLGLMKHQTLNWPKPNI 345

Query: 343 SKGII---------------DPAVLSALYNDLNTVSAIQALHKLAR--------ESTKNH 379
            +  I                   + AL ND+NT  AI  L +LAR            + 
Sbjct: 346 QESKITSLSKHSLNETLNLSRQQFIDALNNDINTSVAISILFELARPLRSLSNQIENGSS 405

Query: 380 DLLP------------IFNASAHILGIEVC------KEHLNKNISIAIEKLVQERLILLK 421
           +L+             +    A++LG++         +       + I + +QER     
Sbjct: 406 ELISESDKHTSYSRWLLLTELANVLGLQAELPKTRTSKQSQNLDEVLIREAIQERKDAKL 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
              F+ AD IR++L  KG  L D K+      +T W
Sbjct: 466 SGDFAKADKIREELNLKGVQLIDKKDG-----VTEW 496


>gi|110680368|ref|YP_683375.1| cysteinyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123065404|sp|Q164A4|SYC_ROSDO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109456484|gb|ABG32689.1| cysteinyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 473

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 205/476 (43%), Positives = 279/476 (58%), Gaps = 39/476 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IK+YNT  R+  +F+ I+  ++RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG
Sbjct: 1   MTIKLYNTKTRRKEDFEPINKDDVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHTYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH- 121
              VTYVRN TD+DDKI  RA +         +I+ IT++ TQ F+ D   +  L P+  
Sbjct: 61  PDHVTYVRNFTDVDDKINARAAES------GRSIAEITAETTQWFLDDMAAVGALEPSIK 114

Query: 122 -------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
                   PRAT +I QM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+  
Sbjct: 115 DRDHQRAMPRATQYIAQMVTMIEDLIAKGHAYAAEGHVLFAVESYSKYGALSGRSIDDMI 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESP------WGRGRPGWHIECSAMSSHYLG 228
            G RV    +K+NP DF+LWK S    PGW  P       GRGRPGWHIECSAM+   LG
Sbjct: 175 AGARVEVAPYKRNPMDFVLWKPSDDATPGWAGPVVGGKSIGRGRPGWHIECSAMAHDLLG 234

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDIHGGG DL+FPHHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+
Sbjct: 235 ATFDIHGGGNDLMFPHHENEIAQSTCA--GHNFANVWMHNEMLQVEGKKMSKSLGNFFTV 292

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-- 346
            +LL+      +  P  VIR  ML THYR+P+D+T ++  EAE  L KW + +       
Sbjct: 293 RDLLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKREEAEETLWKWKKLTDGAESSR 346

Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKN 404
                +++AL +DLNT  AI  LH+   E+  + D     +    +LGI E  ++ ++  
Sbjct: 347 RPHLEIIAALKDDLNTPLAISILHRKFAEAKSDDDKNRFLSTLL-LLGIGETWRDGVDVA 405

Query: 405 ISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           +  A      IE L++        K ++++D  R  LES G  ++  K+  + +R 
Sbjct: 406 VEEAFQTVSLIEALIESIEKARAQKDWATSDRTRDGLESAGVKVQISKDGVSWERG 461


>gi|294677292|ref|YP_003577907.1| cysteinyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294476112|gb|ADE85500.1| cysteinyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 460

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 194/457 (42%), Positives = 266/457 (58%), Gaps = 24/457 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++N+  R+   F+ +DP ++RMY+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 2   IRLHNSKTRRKETFRPLDPRHVRMYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGAD 61

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A   ++      + + I   T +    +  D   L  L P H
Sbjct: 62  HVTYVRNFTDVDDKINATALARKEAGAPGTLEELIRARTEETIGWYHADMDALGALRPDH 121

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT++I  MI +I ++I+ GHAY  +  ++F   S   YG+ S R +D+   G RV  
Sbjct: 122 EPRATDYIGAMITMIADLIVRGHAYAKDGHVLFRVRSYTEYGALSGRSVDDMIAGARVEV 181

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG+DL 
Sbjct: 182 APFKEDPMDFVLWKPSDADLPGWDSPWGRGRPGWHIECSAMSYELLGASFDIHAGGIDLQ 241

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA      AN+W+HN  L +EG+KMSKS GNF T+ +LL+      + 
Sbjct: 242 FPHHENEIAQSCCAHPEGGFANVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QG 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYND 358
            P  VIR   L THY +P+D+T ++  +AE  L KW   +        + P VL AL +D
Sbjct: 296 IPGEVIRFVFLQTHYGKPMDWTAEKAAQAEATLRKWRALTAGVAPSHEVAPGVLEALADD 355

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKLV 413
           LNT  A+  LH L  E         +   SA +LG+ + +     +    ++S    KL 
Sbjct: 356 LNTAGALAVLHGLTGEP-------ALLKGSAQMLGLLLDEMGDWAKAPEVDLSGFAAKLS 408

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             R   ++ K F+  D ++  L + G  +   K    
Sbjct: 409 DLRAKAMETKDFAPVDALKSALMAAGVEVRMSKAGVE 445


>gi|88606973|ref|YP_505147.1| cysteinyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|109894881|sp|Q2GKF4|SYC_ANAPZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88598036|gb|ABD43506.1| cysteinyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 462

 Score =  519 bits (1338), Expect = e-145,   Method: Composition-based stats.
 Identities = 201/480 (41%), Positives = 268/480 (55%), Gaps = 44/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T       F  ID + +++Y CGPTVYD AHIGNAR  +V+DVL+RLLR  Y E 
Sbjct: 1   MKLYDTFSAAKRVFDPIDSACVKIYACGPTVYDLAHIGNARSAVVYDVLFRLLRELYPE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITD+DDKII  A +   +I         T +  + F +D   L CL+PT +PR
Sbjct: 60  -VIYVRNITDVDDKIINAAAETGQNIG------DFTERYIRYFHEDMDALNCLSPTVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M+ LI  ++  GHAY     + F  SS  +YG  S RKIDE   G RV     
Sbjct: 113 ATAEIDTMLQLISRLVESGHAYVKGGSVYFSISSHRHYGRLSGRKIDEMISGNRVSIDAE 172

Query: 185 KKNPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K +P DF+LWK +T  +      WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATEQDIKLGAAWESPWGGGRPGWHIECSAMSYRYLGESFDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
           +FPHHENE+AQ+ CA    + A  W+HNGFL +  G KMSKS GN IT+  L  +   G 
Sbjct: 233 MFPHHENELAQNMCAFSGSEYARYWVHNGFLTVNAGEKMSKSLGNVITVRGLRNSGIEGA 292

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------ID 348
                 VIR   L THYR+P+D+  + + +A+  LSK  ++                 + 
Sbjct: 293 ------VIRYVFLCTHYRKPLDWNEKAIFDAQSALSKMRRSCEEFTSEELNSDIEAVGVH 346

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI--EVCKEH 400
             +L AL +D+NT  AI ALH L  E  K  D      L  + N SA ++GI      + 
Sbjct: 347 NMLLEALKDDMNTPMAIAALHALVGEINKTTDFKERLKLARVLNRSAKLMGITDGFAGKS 406

Query: 401 LNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             + + +  I++L++ R        +S AD IR QL S G +++D K+      +TRW +
Sbjct: 407 AEEAVDVDKIQELLERRREARNGGNYSLADEIRDQLHSMGIVIKDDKDG-----VTRWSR 461


>gi|329936176|ref|ZP_08285969.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
 gi|329304286|gb|EGG48166.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
          Length = 466

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 165/484 (34%), Positives = 246/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFVPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDILRRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKII ++  +            I  +N + F +  T L CL PT++
Sbjct: 61  D--VTFVRNVTDIDDKIITKSADQ------GRPWWAIGYENERAFNEGYTALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M+ +++ +I  GHAYEA+  + FD  S P Y   S +++D  +  +   E 
Sbjct: 113 PRATGHITEMVEMMRTLIERGHAYEADGNVYFDVRSFPGYLELSNQELDNLQQPSSGGET 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP WE+PWG GRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 173 -GKRDPRDFALWKAAKPGEPTWETPWGPGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAY--GDEFARYWLHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++                     + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRVVELAGGVVEPSAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
             A+ +DL    A+  +H   R+                L    A   +LG++   E   
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEQWA 402

Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                       +   +  ++ +R      K +++AD IR QL   G I+ED        
Sbjct: 403 AANDGGEDLHGVVDTLVRMVLDQREAARARKDWTTADAIRDQLGQSGLIIEDSPQGPRWS 462

Query: 453 RMTR 456
              R
Sbjct: 463 IGPR 466


>gi|224536743|ref|ZP_03677282.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521659|gb|EEF90764.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 491

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 165/491 (33%), Positives = 242/491 (49%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVAQYYINRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L++ I+ +G+AY +   + FD         YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIELVKEILKNGYAYVSEGSVYFDVEKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K NPADF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRELDGQAEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A +     + W+HN  + + G+KM KS GNFI ++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGNDMVHYWMHNNMITINGQKMGKSYGNFINLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T K   +++    IR  +L  HYR  +DF+ + L  AE  L++          I P+
Sbjct: 298 FNGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLTRMMDAVNGLEKITPS 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASA 389
                           A+ +DLNT   I  L   AR              D L     + 
Sbjct: 358 ATSSVDVKAVREKCYEAMNDDLNTPIVIAHLFDGARMINNIIAGNDTITADDLKELKETF 417

Query: 390 H-----ILGIEVCKEHLNK---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H     ILG++       +        ++ L++ER+     K ++++D IR +L + GF 
Sbjct: 418 HLFCFDILGLKEENNSNEEREVAFGKVVDMLLEERMKAKANKDWATSDKIRNELTALGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDGKDGCEWK 488


>gi|325958959|ref|YP_004290425.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330391|gb|ADZ09453.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 467

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 168/481 (34%), Positives = 252/481 (52%), Gaps = 55/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT+ R+   F+ I+ + ++++VCGPTVYD++HIG+AR  I FDV+ R ++Y     
Sbjct: 2   IKLYNTMTRRKEIFEPIEGNRVKLFVCGPTVYDYSHIGHARTYISFDVIVRYMKYSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+NITD+DDKI++RA +      +  +   +  +  +++++D   L         R
Sbjct: 60  SVFYVQNITDLDDKILKRADE------LETSPLELARRYEEKYLRDMELLGVEHVNLYAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP+++  I  ++  G+AYE +  + FD S   ++G  S R +++  +  R+     
Sbjct: 114 ATEHIPEIVRQIGVLVDKGYAYETDKGVYFDESKFEDFGKLSNRNLEDLNVH-RIGPDSS 172

Query: 185 KKNPADFILWKR----STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K+NP DF LWK+    S   E  W+SPWG GRPGWHIE +A++  Y G  +DIHGGGLDL
Sbjct: 173 KRNPGDFALWKKRERISEEQEMIWDSPWGTGRPGWHIEDTAITETYFGPQYDIHGGGLDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE EIAQ   +  I+     W+H GFLN++G KMSKS GNFITINELLE       
Sbjct: 233 IFPHHEAEIAQMEASSGIKPMVRYWMHTGFLNVKGEKMSKSLGNFITINELLE------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------ 342
            +   V R  +L THYR PIDF+ + L ++   L++  +                     
Sbjct: 286 EYSPEVFRFFVLSTHYRSPIDFSSEILHQSSQGLNRIYKLIEKINSELDSDTNISLDNDS 345

Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
                   +      A+ ND NT +AI  +  L R+  ++             L  I   
Sbjct: 346 DYIQKLAAVREEFFEAMDNDFNTPAAISTIFDLIRDVNRDIHESNISKNSLTKLKAIIIE 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQE--RLILLKMKKFSSADYIRKQLESKGFILEDY 445
             ++LG++   E  N+         + +  R  L + K +  +D IR +L      LED 
Sbjct: 406 FGYVLGLDFSMEPENEENLEVELLDLLKYVREKLRQNKNWELSDQIRDRLNELNITLEDK 465

Query: 446 K 446
           K
Sbjct: 466 K 466


>gi|260172516|ref|ZP_05758928.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
 gi|315920809|ref|ZP_07917049.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
 gi|313694684|gb|EFS31519.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
          Length = 493

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 165/493 (33%), Positives = 248/493 (50%), Gaps = 44/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++ IYNTL+RK   F  +   ++ MYVCGPTVY  AH+G+ARP I FDVL+R L + 
Sbjct: 1   MEHQLTIYNTLDRKKELFIPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLSHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEELEPMEVVQYFLNRYHKAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I L+Q I+  G+AYE+   + FD +       YG  S R +D+ 
Sbjct: 119 LSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSGRNLDDV 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NPADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  A + +   + W+HN  + + G KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQS-VASQGDDMVHYWMHNNMITINGTKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----- 345
              T K   +++    IR  +L  HYR  +DF+ + L  +E  L +  +   +       
Sbjct: 298 FTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDALDKITSS 357

Query: 346 ----------IIDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP 383
                      +      A+ +DLNT   I  L + AR                  DL  
Sbjct: 358 SATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAEDLKDLKE 417

Query: 384 IFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            F+  +  I+G++  K   +   +     ++ L+++R+     K ++++D IR  L + G
Sbjct: 418 TFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRNTLTALG 477

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 478 FEIKDTKDGFEWR 490


>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 483

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 187/499 (37%), Positives = 249/499 (49%), Gaps = 69/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R+  EF  + P  + MYVCG T YD+ HIG+AR  +VFD L R LR+   E 
Sbjct: 1   MQIYNTLGRQKEEFIPVRPGKVHMYVCGITAYDYCHIGHARSALVFDALVRHLRHLGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA +E            +       F +D  RL  L    +PR
Sbjct: 60  -VTFVRNFTDVDDKIINRANKE------GRDWQEVAQTYIDAFHEDMDRLGVLRADLEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQ+  L   +I  G AY   + ++ F   S P YG  S R +DE   G RV    
Sbjct: 113 ATEYIPQIQELCAKLIAEGTAYATPSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMSS YL    DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSSPYL--PLDIHGGGQDLVFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS    R E  A  W+HNGF+ +   KMSKS GNF TI ++L        S+ 
Sbjct: 231 HHENEIAQSEAVCRCE-LARYWVHNGFVQVNAEKMSKSLGNFKTIRDILG-------SYL 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------QTS 341
              +R  +L  HYR PIDFT + + EAE    +                        + S
Sbjct: 283 PETLRFFLLGKHYRSPIDFTAEGMDEAEKAQHRVYSSLMEARKALERASWKKTPLPAELS 342

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIF---- 385
                +  A  +AL +DLNT  A+  +    R   +              DLL  F    
Sbjct: 343 AEWAALPQAFEAALDDDLNTAQALGQIFSQVRIVNRLLEEKNLRAAESTRDLLEDFLARA 402

Query: 386 ---NASAHILG---IEVCKE-----HLNKNISIA-IEKLVQERLILLKMKKFSSADYIRK 433
              +A   + G   +E   E        KN+ +  +E L+++R  +   K F+ +D +R+
Sbjct: 403 RDWDAQLGLFGRDPVEFLTELRAMRAARKNLDMDRVEDLLRQRREVRMQKDFTRSDALRR 462

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L   G  + D        
Sbjct: 463 ELLDLGVNVRDTPEGQAWD 481


>gi|114704768|ref|ZP_01437676.1| cysteinyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539553|gb|EAU42673.1| cysteinyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 559

 Score =  519 bits (1337), Expect = e-145,   Method: Composition-based stats.
 Identities = 241/553 (43%), Positives = 325/553 (58%), Gaps = 95/553 (17%)

Query: 3   KKIKIYNTLERKITEFQAID---------PSNIRMYVCGPTVYDFAHIGNARPMIVFDVL 53
           + +++ NT+ R+  +F  +D            +RMYVCGPTVYD+AHIGNARPMIVFDVL
Sbjct: 6   RGLRLSNTMTRQKEDFVPLDWRDAEIPEAEKRVRMYVCGPTVYDYAHIGNARPMIVFDVL 65

Query: 54  YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           +RLLR+ YGE  V Y RNITD+DDKI  RA ++ P +P+NDAI  +T++ T+QF  D   
Sbjct: 66  FRLLRHLYGEDHVVYARNITDVDDKINARAARDFPDMPLNDAIRRVTTRTTEQFHTDIAA 125

Query: 114 LACLAPTHQPRATNHI------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
           L CL PT +PRAT+++        M+ +I+ +I  GHAYEA  E++FD +S+P+YGS S+
Sbjct: 126 LCCLPPTVEPRATDYVSGHANGHDMVAMIETLIEKGHAYEAGGEVLFDVTSMPDYGSLSK 185

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           R++DEQ+ G RV    HK+NP DF+LWK S   EPGW SPWGRGRPGWHIECS MS  +L
Sbjct: 186 RRLDEQQAGARVAVDSHKRNPGDFVLWKLSDENEPGWGSPWGRGRPGWHIECSVMSEAHL 245

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           GK FDIHGGGLDLIFPHHENEIAQS CA      A +W+HNG++ +EGRKMSKS GNFIT
Sbjct: 246 GKTFDIHGGGLDLIFPHHENEIAQSRCAHGTASMAEVWMHNGYVQVEGRKMSKSEGNFIT 305

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I++LL T+KFGGR WP  V+RLAMLMTHYREPIDF+V+RL EA   LS+  Q    + I+
Sbjct: 306 IHDLLHTEKFGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEAAEELSRLAQKFDYEEIL 365

Query: 348 D--------------PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHIL 392
           +              P  + AL +DLN   A++ + +      K+    +    AS   L
Sbjct: 366 NNWSLRKELELRDFVPGFVEALEDDLNISLALRYVREAVSNVRKSEFGKVTQIIASLEFL 425

Query: 393 GI---EVCKEHLNKNISIAI---------EKLVQERLIL----LKMKKFSSADYIRKQLE 436
           GI   E+   +    +SI +          KL+  R I     ++  +F ++    +QL+
Sbjct: 426 GIFRPEIIGVYSTGTLSIGMSPHSALREKNKLLNLRAIAANTSIRDAQFEASSLSNEQLK 485

Query: 437 ----SKGFI---------------------------------------------LEDYKN 447
                +G +                                             L+D K+
Sbjct: 486 YFVSERGIVHVEKTEQISELEIQRLVEQRLAFIGDKNWAEADRIRDELAEKGIQLKDSKD 545

Query: 448 PDNGQRMTRWKQK 460
           P+ G+R+T W+ K
Sbjct: 546 PETGERLTTWELK 558


>gi|150009429|ref|YP_001304172.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
 gi|187629835|sp|A6LFT6|SYC_PARD8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149937853|gb|ABR44550.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
          Length = 491

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 156/491 (31%), Positives = 233/491 (47%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S R I++ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSGRNIEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLEQF 297

Query: 292 LETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                   +  + A  IR  +L  HYR  +DF+ + L  AE  LS+  +           
Sbjct: 298 FTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHLMKLQPS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
              +     +      A+ +DLN+   I  L    R      D     +           
Sbjct: 358 ATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDLKELQEVF 417

Query: 388 ---SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++          +    A++ L+  R      K ++++D IR +L + GF 
Sbjct: 418 HLFLFDILGMKDEASASGNHYEAFGKAVDLLLSIRQQAKANKDWATSDKIRNELTAMGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGAEWK 488


>gi|88800332|ref|ZP_01115898.1| cysteinyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88776909|gb|EAR08118.1| cysteinyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 461

 Score =  519 bits (1336), Expect = e-145,   Method: Composition-based stats.
 Identities = 182/474 (38%), Positives = 260/474 (54%), Gaps = 38/474 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K++N+L  +   F+  +P N+ +YVCGPTVY++ HIGN R    +D+L+R+L   Y 
Sbjct: 1   MSLKLHNSLTGQKEHFEPQNPDNVTLYVCGPTVYNYIHIGNGRSAANYDLLFRVLNALY- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY RN TD+DDKI   A+ E         IS+   K  Q + +D  +L  L PT  
Sbjct: 60  -PKVTYARNFTDVDDKINAAAKDE------GVDISVFAEKYMQAYDEDMAKLGNLEPTIV 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  +I  I+ +I  GHAY A+  ++F   S  +YG  S+R  ++   G RV   
Sbjct: 113 PRATEHIGDIITTIEALIERGHAYAADGHVLFAVDSFDDYGKLSKRNTEDMIAGARVEVA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KKNP DF+LWK S+   PGW+SPWGRGRPGWHIEC+AM   +LG+  DIHGGG DL+F
Sbjct: 173 SYKKNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECTAMIQKHLGETIDIHGGGTDLLF 232

Query: 243 PHHENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           PHHENE+AQ +CC+D     A  W+HN  L++EG KMSKS GNFI + ++L  +      
Sbjct: 233 PHHENELAQGTCCSDHSGGYAKYWVHNAMLDIEGEKMSKSLGNFIVLRDILNEQ------ 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLS 353
            P  +IRLA+L  HYR  ++++ Q L ++  LL +          +        D    +
Sbjct: 287 -PPELIRLALLTAHYRSNMNWSEQLLHQSRSLLDRLYTIKRDGDALITTDIDIRDTEFFA 345

Query: 354 ALYNDLNTVSAIQALHKL------ARESTKNHDLLPIFNASAHILGIEVCKEHL------ 401
            L +DLNT  A   LH+L      A    +   L    +A A  +G+             
Sbjct: 346 MLLDDLNTPKAFANLHELTTRFFKAESDDERAALKSEIHAIADFIGVMQMDAQAWFQGTS 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
             +   + AIE L++ER+   + K F+ AD IR QL ++G  ++D +      R
Sbjct: 406 DDSALSADAIEALLEERVAAKEAKDFARADEIRDQLAAEGIQIKDTREGTLWSR 459


>gi|307710644|ref|ZP_07647077.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307618587|gb|EFN97730.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 423

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 161/445 (36%), Positives = 229/445 (51%), Gaps = 39/445 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ H+GNAR  + FD + R   Y   E  V Y+ N TD+DDKII RA++E 
Sbjct: 1   MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE--VAYISNFTDVDDKIINRAKEE- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                      +  K    F +D T L     T  PR    +  +I  ++++I  G AYE
Sbjct: 58  -----GITPQEVADKYIAAFREDVTALGVKRATCHPRVVEFMTDIIRFVEDLIEKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPEKYHKKNPADFILWKRSTPMEPGW 204
           +  ++ F      NY   + + +++ + G       E   K+NP DF LWK + P E  W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLEQGASGRTDEETARKENPVDFALWKAAKPGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH NEIAQS      +  AN 
Sbjct: 173 NSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANY 231

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+HNGF+N++  KMSKS GNFIT+++ L       ++    V+R      HYR+PI+FT 
Sbjct: 232 WMHNGFVNIDNVKMSKSLGNFITVHDAL-------KTLDGQVLRFFFATQHYRKPINFTE 284

Query: 325 QRLTEAEILLSKWPQTSTSK--GIIDPA--------VLSALYNDLNTVSAIQALHKLARE 374
           + + +AE  L     T      G +D           ++A+  D N+ + I  + ++A+ 
Sbjct: 285 KAVRDAETNLKYLKNTYEQPFTGTVDAQELQAFKDKFVAAMDEDFNSANGITVVFEMAKW 344

Query: 375 STK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                 +  +         + GI   +E L+      IE L+Q+R      + F++AD I
Sbjct: 345 INSGNYDTSVKQALADMLEVFGIVFVEEVLD----AEIESLIQKRQEARANRDFATADQI 400

Query: 432 RKQLESKGFILEDYKNPDNGQRMTR 456
           R QL ++G  L D K+   G R TR
Sbjct: 401 RDQLAAQGIKLLDTKD---GVRWTR 422


>gi|159899627|ref|YP_001545874.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159892666|gb|ABX05746.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 466

 Score =  518 bits (1335), Expect = e-145,   Method: Composition-based stats.
 Identities = 171/485 (35%), Positives = 239/485 (49%), Gaps = 51/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R+   F  +   ++ MYVCGPTVY  AHIG+A   +VFDV+ R L +     
Sbjct: 3   LAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RA ++            +    T  F+    +L  L  T  PR
Sbjct: 61  TVRHVMNFTDVDDKIIRRANEQ------GRDPMELAESYTLAFLDQLGQLNVLPATAYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +  IPQ+I  I+ +I    AY  +N ++ F   +  +YG  SRR +D+ + G R+    
Sbjct: 115 VSTTIPQIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRAVDDMRSGARIAPDE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP WESPWG+GRPGWHIECSAMS H L +  DIHGGG DLIFP
Sbjct: 175 AKDDPLDFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A +W+HNG L L G KMSKS GN ITI++ L           
Sbjct: 235 HHENEIAQTESLTG-KNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEH-------S 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GI 346
           A ++RL +L   YR P+ +  + L + +  L +                           
Sbjct: 287 ADIMRLLVLSGSYRAPLVYNDEVLADTQRKLERIMSALKPAHGTATNGPVVETLNAIVAK 346

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGIEV 396
                 +A+ +D N+ +A+  L  L R      D                  A +LG+ +
Sbjct: 347 APADFRAAMDSDFNSAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAAVLGLRL 406

Query: 397 CKEHLNK-NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                +K + +  IE L++ R  L K K+++ +D +R +L      LED  N       T
Sbjct: 407 EAPSASKTDAAPFIELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPN------GT 460

Query: 456 RWKQK 460
            W  K
Sbjct: 461 TWTTK 465


>gi|255016291|ref|ZP_05288417.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_7]
          Length = 491

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 156/491 (31%), Positives = 233/491 (47%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+L+R L + 
Sbjct: 1   MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++ +    L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQYYLNRYHQAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+ +G+AYE+   + FD         YG  S R I++ 
Sbjct: 119 LPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHRYGILSGRNIEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K N  DF LWK + P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 LNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKKYLGEHF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ+  A + +   + W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQA-VASQGDDMVHYWMHNNMITINGQKMGKSLGNFITLEQF 297

Query: 292 LETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                   +  + A  IR  +L  HYR  +DF+ + L  AE  LS+  +           
Sbjct: 298 FTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHLMKLQPS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
              +     +      A+ +DLN+   I  L    R      D     +           
Sbjct: 358 ATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDLKELQEVF 417

Query: 388 ---SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++          +    A++ L+  R      K ++++D IR +L + GF 
Sbjct: 418 HLFLFDILGMKDEASASGNHYEAFGKAVDLLLSIRQQAKANKDWATSDKIRNELTAMGFE 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGAEWK 488


>gi|257057469|ref|YP_003135301.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256587341|gb|ACU98474.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 459

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 168/473 (35%), Positives = 238/473 (50%), Gaps = 44/473 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T  R++ EF+        MY+CG TV    HIG+ R  + +DVL R L +   + 
Sbjct: 3   LQLFDTAARQVREFRPARSGTASMYICGATVQGVPHIGHVRGALNYDVLRRWLVHSGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A +               + + + F      L CL P+  PR
Sbjct: 62  -VLMVRNVTDIDDKILTKAAE------AGRPWWEWAATHERAFEDAYAALGCLPPSVTPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI LIQ +I  GHAY A   + F  S+  +YG  S +++DE + G    E   
Sbjct: 115 ATGHITQMIELIQRLIDSGHAYAAEGNVYFSVSTFDSYGQLSGQRLDEVQQGETQSE--G 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP W +PWGRGRPGWH+ECSAM++ YLG  FDIHGGG+DL+FPH
Sbjct: 173 KRDPRDFTLWKASKPGEPSWPTPWGRGRPGWHLECSAMATTYLGSEFDIHGGGVDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS  A      A  W+HN ++ L G KMSKS GN + I E+L       R + A
Sbjct: 233 HENERAQSMAAGDG--FARYWLHNAWVTLAGEKMSKSLGNVVAIPEML-------RRYRA 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSAL 355
             +R  ++  HYR  I+++   L+E+     +  Q              G +     +AL
Sbjct: 284 VELRAYLIQPHYRSTIEYSDAALSESAQGYRRIEQFLRRVQSSTGEVQVGRVPAEFAAAL 343

Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKNIS 406
            +DL T  A   LH   R+     D         L     A   +LGI+   E   +   
Sbjct: 344 DDDLGTPQAFAVLHNTVRDGNAALDSAKETEARQLAETVRAMVDVLGIDPLSEQWAEQGG 403

Query: 407 IA-------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    ++ +++ER      + F++AD IR +L   G  +ED  N     
Sbjct: 404 AEAEVLARLVDAMLEERQQARANRDFATADAIRDRLIEAGIAVEDTPNGPQWT 456


>gi|254564109|ref|YP_003071204.1| cysteine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254271387|emb|CAX27400.1| cysteine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 462

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 206/482 (42%), Positives = 281/482 (58%), Gaps = 49/482 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFAPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA      +     I  +T     QF +D   L  L   
Sbjct: 61  YGPAHVTYARNVTDVDDKINARA------LERGITIRELTDGTLAQFHRDIRDLGVLMAD 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAKGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--- 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W + +     
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAVP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V+ AL +DLNT +A+  LH+LA  S           A A ++G     +   +
Sbjct: 348 DAEVPEGVVEALCDDLNTPAALGELHRLAGTSPSA------LKAGAGLMGFLAVTQAQRE 401

Query: 404 N--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        +E L+ ER      K ++++D +R  L + G  ++D K+       T
Sbjct: 402 AARVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTALGVSVKDNKDGT-----T 456

Query: 456 RW 457
            W
Sbjct: 457 TW 458


>gi|293378885|ref|ZP_06625040.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|292642426|gb|EFF60581.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 446

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 164/471 (34%), Positives = 244/471 (51%), Gaps = 62/471 (13%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNAR  I FD + R   Y   +  V +V N TD+DDKII  A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGYK--VDFVSNFTDVDDKIIRTANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               +  A   +  +  + F +DT  L     T  PR  +H+P ++  IQ ++  G+AYE
Sbjct: 57  ----LGIAAPEVADRFIRAFEEDTKALNVEPATLHPRVMDHMPDILAFIQVLVEKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---PEKYHKKNPADFILWKRSTPMEPGW 204
           ++ ++ + T    NYG  S + IDE ++G       E+  K++P DF LWK++ P E  W
Sbjct: 113 SSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEEQQQKEDPLDFALWKQAKPGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           +SPWG+GRPGWHIECS M++ +LG+  DIHGGG DL FPHHENEIAQS      +K AN 
Sbjct: 173 DSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLEFPHHENEIAQSEAKTG-KKFANY 231

Query: 265 WIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           W+HNG++ +  +  KMSKS GNFIT++E++       ++    V+R  M  T YR PI +
Sbjct: 232 WMHNGYVTIGEDDEKMSKSLGNFITVHEMI-------QNVDPQVLRFFMATTQYRRPIRY 284

Query: 323 TVQRLTEAEILLSKWPQT---------------------STSKGIIDPAVLSALYNDLNT 361
           +   + EA   L +   T                      T    ++   +  + +D N 
Sbjct: 285 SETTMKEAATNLQRLKNTFDNLKFRQETASENLADDADKITLLENLEQRFIEEMDDDFNA 344

Query: 362 VSAIQALHKLARESTKNHDLL-----------PIFNASAHILGIEVCKEHLNKNISIAIE 410
            + I  +++LA+      D              +F+    I GI    E L   +   IE
Sbjct: 345 ANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFSQWLSIFGILFTAEEL---LDEEIE 401

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           +L++ER      + F+ +D IR  L+ KG +LED        + TRW+++ 
Sbjct: 402 QLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT------PQGTRWRREA 446


>gi|218533086|ref|YP_002423902.1| cysteinyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218525389|gb|ACK85974.1| cysteinyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 462

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 204/476 (42%), Positives = 277/476 (58%), Gaps = 37/476 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA      +     I  +T     QF +D   L  L   
Sbjct: 61  YGPAHVTYARNVTDVDDKINARA------LERGITIRELTDGTLAQFHRDIRDLGVLMAD 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLSGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--- 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W + +     
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEARP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
                  V+ AL +DLNT +A+  LH+LA  S               +   +   E +  
Sbjct: 348 DAGAPEGVVEALCDDLNTPAALGELHRLAGTSPSALKAGAGLMGFLAVTQAQREAERVGA 407

Query: 404 N--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                  +E L+ ER      K ++++D +R  L + G  ++D K+       T W
Sbjct: 408 AGIDVARVEALIAERKAARAAKDWAASDRVRDALTAMGVSVKDNKDGT-----TTW 458


>gi|188991323|ref|YP_001903333.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|167733083|emb|CAP51281.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 479

 Score =  518 bits (1334), Expect = e-144,   Method: Composition-based stats.
 Identities = 193/501 (38%), Positives = 261/501 (52%), Gaps = 67/501 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   ++++N L R++  F  +DPS+  +YVCGPTVY++AHIGNAR  +VFDVL  LLR  
Sbjct: 1   MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y RNITD+DDKI   A+ +   I      S IT +    + +D   L  + P 
Sbjct: 61  YG--ALRYARNITDVDDKINAAAQAQGVPI------STITDRFAAIYRQDMAALGVVPPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P AT HIPQ++ +I+ +I   HAY A   ++F  +S  +YG  SRR  DE   G RV 
Sbjct: 113 IEPEATAHIPQIVAMIEQLIASEHAYAAEGHVLFAVASFADYGKLSRRDPDEMLAGARVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K+NP DF+LWK S+   PGW+SPWGRGRPGWHIECSAM++ +LG   DIH GG+DL
Sbjct: 173 VAPYKRNPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS CA      A  W+HNG LN  G KMSKS GN  T+++L+        
Sbjct: 233 QFPHHENEIAQSECAHGGAVFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIAKH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             P   +RLA+L  HYR+P+D++         RL     LL++       +  I   +  
Sbjct: 288 --PPEALRLALLSAHYRQPLDWSDGLIETETNRLDGLYKLLNRLKAFDEVQASIPDEIED 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIF--------NASAHILGIEVCKEH----- 400
           AL  DLNT  A++ L   A+ + +    L  F          +  I  ++  K       
Sbjct: 346 ALNEDLNTPLALRVL---AKFADRARRALKEFAPPGGPDSEQTGSIDAVKKAKAELLGAG 402

Query: 401 -----------------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                                   +      I  LV ER    K K F+ AD IR+QL  
Sbjct: 403 LALGLLQQDPAAWLSRGNKAGTSTDAGDDARIAALVDERSAAKKAKDFARADAIRQQLAD 462

Query: 438 KGFILEDYKNPDNGQRMTRWK 458
           +G +LED        +  RWK
Sbjct: 463 EGIVLEDT------AQGVRWK 477


>gi|126737778|ref|ZP_01753508.1| cysteinyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126721171|gb|EBA17875.1| cysteinyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 466

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 204/458 (44%), Positives = 270/458 (58%), Gaps = 23/458 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK +EF  ID  N+RMYVCGPTVYD AH+GNARP++VFD LYRLLR+ YG  
Sbjct: 4   IKLHNTKTRKKSEFTPIDAKNVRMYVCGPTVYDRAHLGNARPVVVFDTLYRLLRHVYGAD 63

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A   ++      + + +   +++    ++KD   L  + P H
Sbjct: 64  HVTYVRNFTDVDDKINATAVARKEAGAEGTLEELVHARSNETIDWYLKDMGALGAMQPDH 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNY-GSFSRRKIDEQKMGTRVP 180
            PRAT +I  M+ +I ++I  GHAY A   ++F   S   Y G  S R +D+   G RV 
Sbjct: 124 MPRATEYIAPMVDMISDLISKGHAYAAEGHVLFAVDSWKEYYGRLSGRSVDDMIAGARVE 183

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KKNP DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIHGGG DL
Sbjct: 184 VAPYKKNPMDFVLWKPSGDDLPGWDSPWGRGRPGWHIECSAMSYELLGDTFDIHGGGNDL 243

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA+  +  A  W+HN  L +EG+KMSKS GNF T+ +LLE      +
Sbjct: 244 MFPHHENEIAQSCCANGDDSFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------Q 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYN 357
            +P  VIRL  L THYR+P+D+T ++  EAE  L KW   +           +VL A+ +
Sbjct: 298 GYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTDGVEPSAAPASSVLDAIAD 357

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
           DLNT  A+  LHKLAR      D   +  AS  ++G+   +     E    ++S   +KL
Sbjct: 358 DLNTAGAVAELHKLARAG----DAAGLL-ASGQLMGLLTNERGEWAETPKVDLSEYEDKL 412

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            + R   ++ K FS  D ++      G  +   K    
Sbjct: 413 AKARETAMESKDFSEVDRLKTAYIDAGLEVRMSKAGVE 450


>gi|227541001|ref|ZP_03971050.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227183261|gb|EEI64233.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 451

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 156/469 (33%), Positives = 242/469 (51%), Gaps = 41/469 (8%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +IY++  R + +F  + P +  +Y+CG TV    HIG+ R  + FD+L   L     +  
Sbjct: 4   RIYDSKTRTLQDFVPVRPGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLD-- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
             +VRN+T+IDDKI+ +A +               + + + F +    L    P+ +PRA
Sbjct: 62  TAFVRNVTNIDDKILTKAAEN------GRPWWEWAATHERAFNEAYRILGVTPPSIEPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           T HI ++I  +Q II +GH Y A+  +    ++I  YG  S ++IDE   G        K
Sbjct: 116 TGHITEIIEYMQRIIDNGHGYAADGNVYATPATIEGYGELSGQRIDELDQGESA--GTGK 173

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP W +PWG GRPGWHIEC+AMS+ YLG  FDIH GGLDL FPHH
Sbjct: 174 RDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHIECTAMSTKYLGSEFDIHCGGLDLKFPHH 233

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQ+  A   +K A  W+HNG++ + G KMSKS GN +++  ++E  +         
Sbjct: 234 ENEIAQATAA--GDKFARYWMHNGWVTMSGEKMSKSLGNVLSVPNVVELVR-------PV 284

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----AVLSALYNDLN 360
            +R  +   HYR  ++++   L EA +   +      S+G + P       ++AL +DL 
Sbjct: 285 ELRYYLGSAHYRSMLEYSEGALHEAAVGYRRIEDFVNSQGPVTPGTLPEQFVNALDDDLG 344

Query: 361 TVSAIQALHKLAREST----KNHDLLPIFNASAHILGIEVCKEHL-------NKNISIAI 409
             +A+  +H   RE      K  +L     A   ILG++   E         +  ++  +
Sbjct: 345 VPAALAVVHTTVREGNAHPEKAAELAGQVRAMTAILGVDPQSETWASANSDSSDALAKLV 404

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           E  +Q+R    + K +++AD +R  L + G  L+D  +       T WK
Sbjct: 405 EVHIQQRQKAREEKDWATADAVRDTLAAAGIELKDGAD------GTTWK 447


>gi|326693476|ref|ZP_08230481.1| cysteinyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 470

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 166/490 (33%), Positives = 239/490 (48%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNTL R+   F+ + P  + MYVCGPTVY++ HIGNAR  I FDV+ R   Y     
Sbjct: 2   IQVYNTLSREKEVFKPLTPGKVSMYVCGPTVYNYIHIGNARSAIAFDVIRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR+E            I +K    F  DT  L     T + R
Sbjct: 60  TVKYVSNFTDVDDKIIKRAREEGVDEM------TIANKYADAFHADTLPLNIKPATIRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP +I  +Q++I  G+AYE+  ++ F       YG  + + + E            
Sbjct: 114 ATEVIPDIITFVQDLIDKGYAYESAGDVYFRAKQFKGYGILAHQDLTEMAANAAGRLDDA 173

Query: 181 EKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++P DF +WK S   +   W SPWG GRPGWHIECS MS  YLGK  D+HGGG+D
Sbjct: 174 EQIRKEDPIDFAVWKASRDTDKISWASPWGNGRPGWHIECSVMSQKYLGKTIDVHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +   N W+HNGF+N++  KMSKS GNF T++++L       
Sbjct: 234 LAFPHHTNEIAQSEARTGQK-FVNYWLHNGFVNVDNEKMSKSLGNFTTLHDMLTDYD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------QTSTSKGII 347
                  IR  +  THYR PI++    L +A   L +                      +
Sbjct: 290 ---DPMAIRYLLATTHYRRPINYAPDTLAQARAALERIRTGYRNLQFRLADAVPGQDTAL 346

Query: 348 D-------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
           +        A   A+ +D N  +A+ A+ +L   +    +           LL       
Sbjct: 347 ETTIQQQVEAFELAMDDDFNVPNAVAAIFELITLANTYAEATTVYDNTVKTLLTTIETLM 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LGI+        ++++   +L+  R I    + + ++D +R QL++ G I+ED     
Sbjct: 407 GVLGIDGLSG--TSDLTVEQRRLIDARAIARTSQDYQTSDELRDQLKTLGIIIEDTPQGQ 464

Query: 450 NGQRMTRWKQ 459
                 RW +
Sbjct: 465 ------RWHR 468


>gi|257064638|ref|YP_003144310.1| cysteinyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256792291|gb|ACV22961.1| cysteinyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 498

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 169/509 (33%), Positives = 242/509 (47%), Gaps = 84/509 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T   +  +F       I MYVCGPTVY++ HIGNAR  I FD++ R L +   + 
Sbjct: 2   IRLYDTQAHQKLDFVPNQEGVIHMYVCGPTVYNYIHIGNARTFISFDIIRRYLMWRGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII++A +E        + + + ++ T  F++D   +  L P  +P+
Sbjct: 61  -VTFVQNVTDVDDKIIKKANEE------GRSAAEVATEYTDAFIEDMRAMGVLDPDVRPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----- 179
           AT  I  MI L+  +I  GHAYE   ++ F   S P YG  S R IDE + G R      
Sbjct: 114 ATEEIDSMIELVSTLIERGHAYEVEGDVYFSVRSFPEYGKLSHRNIDELEGGHRELRADG 173

Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              +  K++P DF +WK + P EP W SPWG GRPGWHIECSAMS  YLG   DIHGGG 
Sbjct: 174 QGLEDRKRDPLDFAVWKAAKPGEPSWPSPWGEGRPGWHIECSAMSRKYLGLPLDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A  +   +N W+H G LN+ G KMSKS GNF+ + ++L+T +  
Sbjct: 234 DLAFPHHENEIAQSEAAYGVA-FSNHWMHGGMLNINGEKMSKSLGNFLLLRDILKTVE-- 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------- 337
                  V+R+ M   HYR P+DF  +R+ EA   L +                      
Sbjct: 291 -----PSVLRMFMARAHYRSPLDFNEERVAEAAASLERIVNFVERMDWLVSNPDGNAQPL 345

Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------HD 380
                       +    + A+ +D NT  A+  +     ++                   
Sbjct: 346 SGDYSFEQGIEAVRAGFVEAMDDDFNTAGALGCIFTFVNDANAALGNATLNAEDASRIKA 405

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL--------------------- 419
           +         + GI V K    +  +  I+     R +                      
Sbjct: 406 VRDTVVDLMGVFGISVEKAAGEEYPAEVIDL---ARDVAGYAGSDAAEAVEALLAARAQA 462

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNP 448
            K K ++ AD +R  L   GF++ED    
Sbjct: 463 RKEKNWAVADGVRNGLNDLGFVIEDTPQG 491


>gi|222111282|ref|YP_002553546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254781677|sp|B9MAU5|SYC_DIAST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221730726|gb|ACM33546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 458

 Score =  517 bits (1333), Expect = e-144,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 252/478 (52%), Gaps = 45/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + EF  I+P ++RMYVCG TVYD  H+G+AR MI FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRALEEFSPIEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PTH+
Sbjct: 61  --AVTYVRNITDIDDKIIKRA------VENGETIRSLTDRMIDALHQDADALGIERPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  
Sbjct: 113 PRATAYVPQMLDMIGTLQGKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K +P DF+LWK + P EP    W SP+G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 173 QDGKHDPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A +W+HNGF+N++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA---- 350
            + + A  +R  ++ +HYR P++++   L +A   L +        + +   +D A    
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSNVHLDDARAALKRLYTALSLVAPAPVEVDWAEGYA 344

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEH 400
               +A+  D  T  A+  L  LA E  ++       +  A    LG+      +  K  
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSPAAAGLLKALGRHLGLLQADPQDFLKAG 404

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              + +    ++             + AD IR  L ++G +L+D          T W+
Sbjct: 405 AGLDEAAIQAQIAARAAAKAAKNF-AEADRIRNDLLAQGIVLKDSAT------GTTWE 455


>gi|332992532|gb|AEF02587.1| cysteinyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 460

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 166/480 (34%), Positives = 252/480 (52%), Gaps = 47/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  R   +F  +    + +YVCG TVY+ +H+G+AR  + FD+L R LR+   + 
Sbjct: 2   LHLYNTRTRDKAKFVPLQEGKVGLYVCGITVYNLSHMGHARTYLSFDILVRYLRHLGFD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +        +    +T +      +D   +  L P  +P 
Sbjct: 61  -VKYVRNITDIDDKIIARANEN------GETFEALTKRTIGMMHEDFAAINLLEPDVEPT 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            + H+  +I +I+ ++  G AY+A N +++FD S  P YG  S++ +D+ + G+RV    
Sbjct: 114 VSGHMDDIIDIIKILMDKGFAYQASNGDVLFDVSKFPEYGKLSKQDLDQLQSGSRVEVAL 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF+LWK +   EP W+SPWG GRPGWHIECSAM+  +LG  FDIHGGG DL FP
Sbjct: 174 DKNDPLDFVLWKPAKAGEPAWQSPWGEGRPGWHIECSAMNKKHLGAHFDIHGGGSDLTFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSCCA   +   N+W+H G + ++  KMSKS GNF T+ ++L       +   
Sbjct: 234 HHENEVAQSCCAF-DKPYVNVWMHAGMVQVDDEKMSKSLGNFFTLRDVL-------QEHD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVLS 353
           A  +R  ++  HYR  + ++   +T+A+  L +         + +              +
Sbjct: 286 AETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVTVDESTDLSYGGYLARFEA 345

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHL----- 401
           A+ +DLN   A   L  +ARE  +N D       L  +      ILG+            
Sbjct: 346 AMNDDLNVPEAFSVLFDVAREINRNKDNAEEASKLAAVLKGLGAILGMLQSDPDAYLKGG 405

Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             N + +  IE L+++R      K +++AD  R  L +K  +LED      G   T W++
Sbjct: 406 SENDDEAAEIEALIKQRNDARAAKDWAAADAARDALNAKNIVLED------GPAGTTWRR 459


>gi|124267642|ref|YP_001021646.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124260417|gb|ABM95411.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 474

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 179/481 (37%), Positives = 252/481 (52%), Gaps = 45/481 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +   ++I+NTL R    F  I+P ++RMYVCG T+YD  H+G+AR M+ FDV+ R LR  
Sbjct: 12  VPMSLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVS 71

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VTYVRNITDIDDKII+RA      +     I  +T + T    +D   L    PT
Sbjct: 72  GL--RVTYVRNITDIDDKIIKRA------LERGIPIRQLTDEMTAAMHQDIGALGIEPPT 123

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H+PRAT ++  M+ LI+ +  +G AY     ++ +     P YG  S + ID  + G RV
Sbjct: 124 HEPRATEYVGAMVGLIEVLERNGLAYRVPGGDVNYSVRKFPGYGRLSGKSIDALRAGERV 183

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K +P DF+LWK + P EP    +++P+G GRPGWHIECSAMS   LG+ FDIHGG
Sbjct: 184 AVLEGKDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGG 243

Query: 237 GLDLIFPHHENEIAQSCCADR---IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           G+DL FPHHENEIAQS  A          N+W+HNGFLN++  KMSKS GNF TI ++L 
Sbjct: 244 GMDLQFPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDIL- 302

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIID- 348
                 + +    IR  ML  HYR P +F+   L +A   L +       T+ +   ID 
Sbjct: 303 ------KRYDGETIRFFMLRVHYRSPFNFSDAGLDDARSGLRRLYTALEGTAVAPAEIDW 356

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCK--- 398
                    +A+ +D NT  A+  L  LA E  ++       +  + A  LG+   +   
Sbjct: 357 TDPHAARFKAAMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAAQ 416

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             +  +   +  IE  +  R      + F+ +D IR  L ++G +L+D          T 
Sbjct: 417 YLQGGSGVDTGHIEAQIAARAAAKAARDFAESDRIRDALAAQGIVLKDT------PAGTT 470

Query: 457 W 457
           W
Sbjct: 471 W 471


>gi|163736517|ref|ZP_02143936.1| hypothetical protein RGBS107_15336 [Phaeobacter gallaeciensis
           BS107]
 gi|161390387|gb|EDQ14737.1| hypothetical protein RGBS107_15336 [Phaeobacter gallaeciensis
           BS107]
          Length = 465

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 196/455 (43%), Positives = 265/455 (58%), Gaps = 17/455 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R       I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 4   IKLHNTRTRGKEVLNPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGTD 63

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTY RN TD+DDKI   A   ++      + + +   T +    ++ D   L  L P H
Sbjct: 64  HVTYARNFTDVDDKINATALARKEAGAPGTLEELVQERTEETISWYLADMAELGALEPDH 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PRAT +IPQMI +I+ +I  GHAY +    ++F   S  +YG+ S R +D+   G RV 
Sbjct: 124 MPRATAYIPQMIAMIEELIAKGHAYADGAGHVLFSVKSYKDYGALSGRSVDDMIAGARVE 183

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS    G  FDIHGGG DL
Sbjct: 184 VADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGDSFDIHGGGNDL 243

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+ +LL+      +
Sbjct: 244 MFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 297

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---TSTSKGIIDPAVLSALYN 357
            +P  VIRL  L THYR+P+D+T ++  EAE  L KW Q   T+         V++AL +
Sbjct: 298 GYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWYQLAATALDNEEPYVGVINALSD 357

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI--EKLVQE 415
           DLNT  AI  LH+L            +      ++G +       +NI + +   KL   
Sbjct: 358 DLNTAQAIAELHQLFHAGDAASMRASL--KFMGLMGADTPTWATGENIDLTLYERKLSDA 415

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           R + ++ K FS  D ++    + G  +   K    
Sbjct: 416 REVAMQSKDFSEVDRLKAAFVAAGVEVRMSKTGVE 450


>gi|21222630|ref|NP_628409.1| cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|30316185|sp|Q9L0Q6|SYC_STRCO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|7242756|emb|CAB77329.1| putative cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
          Length = 613

 Score =  517 bits (1332), Expect = e-144,   Method: Composition-based stats.
 Identities = 165/482 (34%), Positives = 249/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 150 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 208

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII +A ++      N     I  +N + F      L CL PT++PR
Sbjct: 209 -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 261

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S+P Y S S + +DE +       +  
Sbjct: 262 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQ-PSEDGETG 320

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DLIFPH
Sbjct: 321 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 380

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + WP 
Sbjct: 381 HENEIAQAKGF--GDAFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 431

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE    +                     + PA   
Sbjct: 432 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 491

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK------ 398
           A+ +DL    A+  +H   R+                L    A   +LG++         
Sbjct: 492 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGA 551

Query: 399 ----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E L   +   +  ++ +R      K +++AD IR QL   G ++ED          
Sbjct: 552 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDQLGQSGLVIEDSPQGPRWSLG 611

Query: 455 TR 456
           +R
Sbjct: 612 SR 613


>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 473

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 186/488 (38%), Positives = 266/488 (54%), Gaps = 57/488 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+ +RK  EF      +I MYVCG TVYD+ HIG+AR M+ FD + R LR       V
Sbjct: 6   LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQG--WSV 63

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+RNITDIDDKII+RA +        + I  +T++      +D   L C AP   P+AT
Sbjct: 64  RYIRNITDIDDKIIKRANEN------GETIQQLTTRFIDAMNEDAANLGCAAPDEAPKAT 117

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKY 183
            +I QM  +I N++  G AY A N ++ F+ +    YG  S RK+D+ + G   RV  + 
Sbjct: 118 EYIDQMQNMIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  +   E+  N W+H GF+N++G KMSKS GNF TI +++E        + 
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
             VIR  ++ +HYR P++F+   L EA+  L+++  +          T+   +D + +  
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349

Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE------ 395
              A+ +D NT  A+  L +L +E  +            L        +ILG+       
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHDVDA 409

Query: 396 VCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             K  + +         IE  +Q+R+   K K F+ AD IR+ L  +G +LED +     
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVDAKKAKDFAKADGIRQSLLDQGVVLEDTR----- 464

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 465 -QGTVWRR 471


>gi|163854141|ref|YP_001642184.1| cysteinyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665746|gb|ABY33113.1| cysteinyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 462

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 204/476 (42%), Positives = 277/476 (58%), Gaps = 37/476 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   VTY RN+TD+DDKI  RA      +     I  +T     QF +D   L  L   
Sbjct: 61  YGPAHVTYARNVTDVDDKINARA------LERGITIRELTDGTLAQFHRDIRDLGVLMAD 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GGLDLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTS 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W      +  
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V+ AL +DLNT +A+  LH+LA  S               +   +   E +  
Sbjct: 348 GAEVPEGVVEALCDDLNTPAALGELHRLAGTSPSALKAGAGLMGFLAVTQAQREAERVGA 407

Query: 404 N--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                  +E L+ ER      K ++++D +R  L + G  ++D K+       T W
Sbjct: 408 AGIDVARVEALIAERKAARAAKDWAASDRVRDALTAMGVSVKDNKDGT-----TTW 458


>gi|302380049|ref|ZP_07268526.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
 gi|302312122|gb|EFK94126.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
          Length = 448

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 163/464 (35%), Positives = 235/464 (50%), Gaps = 47/464 (10%)

Query: 19  QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           + I   N+ +YVCGPTVY++ H+GNARP++VFD L R   + Y    V +V N TDIDDK
Sbjct: 1   KPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRY--FIYKGYNVKFVSNFTDIDDK 58

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT-HQPRATNHIPQMIYLIQ 137
           II +A+ E      N     IT K  Q ++ + + L         P+AT +I +MI  ++
Sbjct: 59  IINKAKDE------NIDFREITKKYIQAYLNNVSGLNFDEDDTIHPKATEYIDEMIKFVK 112

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            +   G AY  +  + FD +   +YG  S++ ID+ + G R+     KKNP DF LWK+ 
Sbjct: 113 TLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNSEKKNPMDFALWKKR 172

Query: 198 TPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
               EP WESPWG GRPGWH+ECS MS   LG   DIH GG DL FPHHENEIAQS    
Sbjct: 173 KEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQFPHHENEIAQSETCT 232

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                AN W+HN  + ++  KMSKS  NF  + ++        + +   VIRL +L  HY
Sbjct: 233 GAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEFDLEVIRLWLLSVHY 284

Query: 317 REPIDFTVQRLTEAEILLSKWP-----------------QTSTSKGIIDPAVLSALYNDL 359
           R PIDF+   L   +  L +                   +   +          A+ +D+
Sbjct: 285 RNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDNIKTFREKFEQAMDDDI 344

Query: 360 NTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKEHLNKNISIAI 409
           NT  AI  L    +   KN+          D   + +  +++LGI   ++  + ++   I
Sbjct: 345 NTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLGILFKED--DDDLDSEI 402

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           E L+++R    K K F  AD IR +L S G +L+D ++    +R
Sbjct: 403 EDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 446


>gi|187631649|sp|A2SIM2|SYC_METPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 461

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 179/479 (37%), Positives = 251/479 (52%), Gaps = 45/479 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I+NTL R    F  I+P ++RMYVCG T+YD  H+G+AR M+ FDV+ R LR    
Sbjct: 1   MSLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +     I  +T + T    +D   L    PTH+
Sbjct: 61  --RVTYVRNITDIDDKIIKRA------LERGIPIRQLTDEMTAAMHQDIGALGIEPPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++  M+ LI+ +  +G AY     ++ +     P YG  S + ID  + G RV  
Sbjct: 113 PRATEYVGAMVGLIEVLERNGLAYRVPGGDVNYSVRKFPGYGRLSGKSIDALRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P DF+LWK + P EP    +++P+G GRPGWHIECSAMS   LG+ FDIHGGG+
Sbjct: 173 LEGKDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGGGM 232

Query: 239 DLIFPHHENEIAQSCCADR---IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           DL FPHHENEIAQS  A          N+W+HNGFLN++  KMSKS GNF TI ++L   
Sbjct: 233 DLQFPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDIL--- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIID--- 348
               + +    IR  ML  HYR P +F+   L +A   L +       T+ +   ID   
Sbjct: 290 ----KRYDGETIRFFMLRVHYRSPFNFSDAGLDDARSGLRRLYTALEGTAVAPAEIDWTD 345

Query: 349 ---PAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCK----- 398
                  +A+ +D NT  A+  L  LA E  ++       +  + A  LG+   +     
Sbjct: 346 PHAARFKAAMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAAQYL 405

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +  +   +  IE  +  R      + F+ +D IR  L ++G +L+D          T W
Sbjct: 406 QGGSGVDTGHIEAQIAARAAAKAARDFAESDRIRDALAAQGIVLKDT------PAGTTW 458


>gi|123966538|ref|YP_001011619.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|187629848|sp|A2BXK1|SYC_PROM5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123200904|gb|ABM72512.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 492

 Score =  517 bits (1331), Expect = e-144,   Method: Composition-based stats.
 Identities = 178/513 (34%), Positives = 258/513 (50%), Gaps = 81/513 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL + +  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKNVEVFKPIDE-EVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKI++RA++E      N ++  ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKFVQNFTDIDDKILKRAKEE------NSSMKQVSEKNIAEFHKDMDALGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I+ +   G AY    ++ +      +YG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFIKVLEKKGFAYARGGDVYYSVFKNKDYGKLSNQNILEQNINQQGRMTSD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 173 ESNKKNNPQDFALWKKAKENEPSFDSPWGKGRPGWHIECSAMVKDELGETIDIHLGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI +LL++      
Sbjct: 233 IFPHHENEIAQSESANN-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRDLLDSGT---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------QTSTSK 344
                 +R  +L  +YR+P+DFT + L  A                        + + + 
Sbjct: 288 --SPMTLRYFVLTVNYRKPLDFTDEALKSASEAWKTINVALSFFDITKKENLSIEVNETN 345

Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLAR---------------E 374
             ++                   +AL NDLNT  AI  +++LA+               +
Sbjct: 346 EFVEEKYKEKINYEISQKKIKFTNALNNDLNTAGAIAIIYELAKPLKNFINQFQRIKNLD 405

Query: 375 STKN-----HDLLPIFNASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFS 426
              N      + L        +LG++  KE +   NK     I  L+ +RLI  K + ++
Sbjct: 406 INTNEKFHLRETLKTLEELTQVLGLK--KEEIIIENKITEEQIISLINKRLIAKKGRDYA 463

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            AD IR  L+ KG  L D         +T W +
Sbjct: 464 EADKIRNSLKEKGIELID-----QSTELTTWVR 491


>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
 gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 493

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 183/500 (36%), Positives = 260/500 (52%), Gaps = 74/500 (14%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   E  V+YVR
Sbjct: 1   MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYE--VSYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RA++      + +    ++ +  ++F +D  +L CL P+ QPR ++HIP
Sbjct: 59  NFTDVDDKIIARAKE------LEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           Q+I LI+ I+ +G+AY+ + +I F     P YG  S RK+++ + G RV     KK+PAD
Sbjct: 113 QIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPAD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIA 232

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC A      +  WIHNGF+ ++  KMSKS GNF TI ++++        +    +RL 
Sbjct: 233 QSCAACDSSNIS-YWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL-------YHPLALRLF 284

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------------TSTSKGI 346
           ++ THYR PI+++   L  A   +    Q                        T TS   
Sbjct: 285 LMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINT 344

Query: 347 IDPAVLSALYNDLNTVSAIQA-------LHKLA------RESTKNHDLLPI---FNASAH 390
                ++++ +DL T   + A       ++ L       +++ +   L  +         
Sbjct: 345 FRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALETTIRDVLT 404

Query: 391 ILG---------IEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           ILG         +E  KE   K        + + VQER    K K++  +D IRK L   
Sbjct: 405 ILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKV 464

Query: 439 GFILEDYKNPDNGQRMTRWK 458
           G  L D          T W+
Sbjct: 465 GIALMDS------PEGTTWR 478


>gi|313889588|ref|ZP_07823232.1| cysteine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313122015|gb|EFR45110.1| cysteine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 447

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 163/468 (34%), Positives = 242/468 (51%), Gaps = 39/468 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  +  + I MYVCGPTVY++ HIGNAR  + FD + R   Y     
Sbjct: 2   IKIYDTMTRSLRDFVPLKENQISMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +         +   +  K  + F+ DT  L     +  PR
Sbjct: 60  HVNYISNFTDVDDKIIKAAAE------AGISPKALADKFIEAFMADTKELGIKPASQHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  +Q +I  G AYE+  ++ F  +   NY   + + + + ++G       E
Sbjct: 114 VMDYMGEIIAFVQALIQKGFAYESAGDVYFRVTKSENYARLANKTLADLEVGASGRTDAE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P E  W+SPW +GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 TALKENPLDFALWKSAKPGEISWDSPWSKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+ ++  KMSKS GNF+T++E+LE       S
Sbjct: 234 FPHHTNEIAQSEAKTG-QTFANYWMHNGFVKVDNEKMSKSLGNFVTVHEMLE-------S 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
               ++R  +    YR+PI+FT + + +AE+ L     T          ++       + 
Sbjct: 286 VDGQILRFFLATQQYRKPINFTEKAIRDAEVNLKYLKNTYLLPLQTGSDTSRLFDFKKSF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
             A+ +D N  + I  +   A+     H    +   F     + GI   +E L+ +    
Sbjct: 346 KEAMDDDFNAANGITVIFDFAKWINSGHYDQTVKTAFGEMLEVFGIVFQEEVLDSD---- 401

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +E L+ ER      + F+ AD IR  L S+G  L D K+   G R TR
Sbjct: 402 VEALIAERQAARAARDFTKADSIRDHLASQGIKLLDTKD---GVRWTR 446


>gi|254388528|ref|ZP_05003762.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294814057|ref|ZP_06772700.1| Cysteinyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
 gi|326442461|ref|ZP_08217195.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197702249|gb|EDY48061.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326656|gb|EFG08299.1| Cysteinyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
          Length = 466

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 166/489 (33%), Positives = 255/489 (52%), Gaps = 54/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFTPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT++RN+TDIDDKII+++ ++            I  +N + F      L CL PT++
Sbjct: 61  E--VTFIRNVTDIDDKIIKKSAEQ------GRPWWSIGYENERAFNAGYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M+ +++ +I  GHAYEA   + FD  S P Y   S + +++ +       +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEAEGNVYFDVRSFPGYLQLSNQDLEDLRQPAG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+F
Sbjct: 172 TGKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDEFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDP------AV 351
              V+R  +   HYR  I+++ + L EAE   ++           + G ++P      A 
Sbjct: 283 KPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIVGFMQRVCEKAGGAVEPAAEVPLAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQALAVIHTTVRQGNSALAADDKETAAARLAEVRAMLGVLGLDPFDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++Q+R      K +++AD IR QL+  G ++ED      G 
Sbjct: 403 GEAESGEDLHGAVDTLVRLVLQQREAARGRKDWATADAIRDQLQQSGLVIED------GP 456

Query: 453 RMTRWKQKP 461
             TRW   P
Sbjct: 457 EGTRWSLGP 465


>gi|167752833|ref|ZP_02424960.1| hypothetical protein ALIPUT_01094 [Alistipes putredinis DSM 17216]
 gi|167659902|gb|EDS04032.1| hypothetical protein ALIPUT_01094 [Alistipes putredinis DSM 17216]
          Length = 490

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 165/491 (33%), Positives = 248/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ +YNTL+R+   F+ I+P ++ MYVCGPTVY   H+G+ARP + FD+L+R LR  
Sbjct: 1   MESKLTLYNTLDRRKETFEPINPPHVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLRSL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRN+TD+     D      +    +         +    T+++ +    L  
Sbjct: 61  GYK--VRYVRNVTDVGHLEHDADDGEDKISKKARLEQLEPMEVAHYYTERYHRAMDELNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I +++ I+ +G AYE+N  + FD         YG  S R +D+ 
Sbjct: 119 LSPSIEPCASGHIIEQIAMVKEILDNGFAYESNGSVYFDVEKYNRKYSYGRLSGRNLDDI 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K++  DF LWK+++P     W SPW  G PGWH+ECSAMS+ YLG+ F
Sbjct: 179 LTNTRELDGQGDKRHSCDFALWKKASPEHIMRWPSPWSDGFPGWHMECSAMSTKYLGQRF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQS  A   +  A  WIHN  + + G+KM KS GNFIT+ EL
Sbjct: 239 DIHGGGMDLMFPHHECEIAQSTAALGHDS-AKYWIHNNMITINGQKMGKSLGNFITLEEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
                K   +++    IR  +L  HYR  +DF+ + L  AE  L +  +   +   I P 
Sbjct: 298 FTGNHKLLTQAYSPMTIRFFVLQAHYRSTLDFSNEALQAAEKGLDRLMKAVEALDKIKPS 357

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPI---- 384
                           AL +DLN+  AI AL    R   +           DL  +    
Sbjct: 358 EQSTVDPAELETRCREALDDDLNSPMAISALFDWVRIINQLVEGQQRITAADLEKLREIV 417

Query: 385 FNASAHILGIEVCKEH---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG+   K         ++  +  L+  R      K ++ +D IR +L + G  
Sbjct: 418 RRYVFDILGLRDEKAASAGGKDLVTPLVNMLLDLRQAAKTEKNWALSDKIRDELTAIGIR 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+  + +
Sbjct: 478 VKDRKDGCDWE 488


>gi|225468582|ref|XP_002263803.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
 gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 184/516 (35%), Positives = 265/516 (51%), Gaps = 81/516 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++++YNT+ ++   F+ +    + MYVCG T YD +H+G+AR  + FDVLYR L++  
Sbjct: 4   TTELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VTYVRN TD+DDKII RA +      + +    ++S+  Q+++ D T L CL PT 
Sbjct: 64  YE--VTYVRNFTDVDDKIIRRANE------LGENPLTLSSRFCQEYLDDMTDLQCLTPTQ 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK+++ + G RV  
Sbjct: 116 QPRVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAV 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   FDIHGGG+DLI
Sbjct: 176 DSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSC A   E   + W+HNG +     KMSKS GNF TI ++ +        
Sbjct: 236 FPHHENEIAQSCAA-CQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL------- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQTSTSKGII 347
           +    +R  +L THYR P++++               Q L + E  LS + + +     I
Sbjct: 288 YHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCI 347

Query: 348 DPA-----------VLSALYNDLNTVSAI-QALHKLARESTKNHDLL------------- 382
            PA             + + +DL+T   +  +L +  R      ++L             
Sbjct: 348 TPAAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAV 407

Query: 383 -------PIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKM 422
                          +LG+       EV ++   K +         +  L++ER +  K 
Sbjct: 408 QSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALARKN 467

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           K FS  D IR  L SKG  L D        + T W+
Sbjct: 468 KNFSRGDQIRADLASKGIALMDV------GKETIWR 497


>gi|325281506|ref|YP_004254048.1| cysteinyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
 gi|324313315|gb|ADY33868.1| cysteinyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
          Length = 492

 Score =  516 bits (1330), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/491 (33%), Positives = 250/491 (50%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK ++ +YNTL RK  +F+ I+P  + +YVCGPTVY  AH+G+ARP I FD+L+R L+Y 
Sbjct: 1   MKNRLVLYNTLSRKKEQFEPINPPFVGLYVCGPTVYGDAHLGHARPAITFDLLFRYLKYL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+    DD      + E  +         I    T ++  +  +L  
Sbjct: 61  GYK--VRYVRNITDVGHLTDDSDDGEDKIEKKAKLDRLEPMEIVQFYTNRYHHNMEQLNT 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P A+ HI +   L++ I+ +G AYE++  I FD  +      YG  S R+++E 
Sbjct: 119 LPPSIEPHASGHIIEQEELVKKILDNGFAYESDGSIYFDVEAYNKKYSYGKLSGRRVEEL 178

Query: 174 KMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR +  +  K+NPADF LWK++TP     W SPW  G PGWH+ECS MS  YLG  F
Sbjct: 179 FANTRQLDGQGEKRNPADFALWKKATPEHIMRWPSPWSNGFPGWHLECSCMSQKYLGDRF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDL FPHHE EIAQS  A   E     W+HN  + ++G+KM KS GNFIT+++L
Sbjct: 239 DIHGGGLDLQFPHHECEIAQSTAAYGHEA-VKYWMHNNMVTIKGQKMGKSLGNFITLDQL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
                    +++    +R  +L  HYR P+DF+ + L  A+    +      +   +   
Sbjct: 298 FSGENDVLEQAYSPMTVRFFILQAHYRSPLDFSNEALKAAQKGYERLMTAVRALDKVKAS 357

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNAS- 388
                           A+ +DLNT   I  L    R            +   L       
Sbjct: 358 AGNTVDVDALITQCEEAIDDDLNTPVLISHLFDGVRMINSLVAGNEKIDAGNLAKLKKLY 417

Query: 389 ----AHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++   E ++++  +    ++ ++  R    + K ++++D IR +L++ G  
Sbjct: 418 QDYVFDILGLKAESESVSQDHEVLGKILDMVMSIRTEAKQKKDWATSDKIRDELKAAGVA 477

Query: 442 LEDYKNPDNGQ 452
           ++D K     +
Sbjct: 478 IKDTKEGYEWE 488


>gi|83950345|ref|ZP_00959078.1| cysteinyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83838244|gb|EAP77540.1| cysteinyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 465

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 202/460 (43%), Positives = 260/460 (56%), Gaps = 29/460 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-- 60
            +IK++N+  R    F  +DP N+RMYVCGPTVYD AH+GNARP++VFD+LYRLLR+   
Sbjct: 7   TEIKLHNSRSRTKEVFTPLDPQNVRMYVCGPTVYDRAHLGNARPVVVFDMLYRLLRHVAK 66

Query: 61  -YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             G   VTY RN TD+DDKI  RA      I        IT++ TQ F+ D   L  L P
Sbjct: 67  TNGWGKVTYARNFTDVDDKINARALASDRRI------EEITAETTQWFLDDMAALGALEP 120

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            H PRAT +IPQMI +I+ +I   HAY A   ++F   S   YG  S R +D+   G RV
Sbjct: 121 DHMPRATAYIPQMIAMIEGLIEGDHAYAAEGHVLFRVRSYKAYGGLSGRSVDDMIAGARV 180

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF+LWK S   +PGWESPWG GRPGWHIECSAMS   LG  FDIHGGG D
Sbjct: 181 EVAPFKEDPMDFVLWKPSDATQPGWESPWGYGRPGWHIECSAMSYEILGPSFDIHGGGND 240

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQSCCA    + A +W+HN  L +EG+KMSKS GNF T+ +LL+      
Sbjct: 241 LMFPHHENEIAQSCCAHPEGEFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------ 294

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPAVLSALYN 357
           +  P  VIR   L THYR+P+D+T ++   A+  L  +         G  D  V+ AL +
Sbjct: 295 QGIPGEVIRFVFLSTHYRKPMDWTAEKARNAKNTLDHFLGLIVGVEPGEPDDEVVLALAD 354

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-------CKEHLNKNISIAIE 410
           DLNT  A+  LH LA+E         +  AS   LG ++         E     ++   E
Sbjct: 355 DLNTHKALTRLHTLAKE-----KKADVLKASLLFLGFDLSTLESGWFGEEHYDGLAPLAE 409

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +L Q R   +  K FS  D ++  L   G  +   K    
Sbjct: 410 RLGQVRAAAMVSKDFSEVDRLKSALLEAGVEVRMSKEGVE 449


>gi|116071086|ref|ZP_01468355.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. BL107]
 gi|116066491|gb|EAU72248.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. BL107]
          Length = 499

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 173/519 (33%), Positives = 245/519 (47%), Gaps = 81/519 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MTLRLTNTLTRRTEPFTPLRPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +V+N TDIDDKI++RA  E      N +++ ++ +N   F  D   L  L P   
Sbjct: 61  E--VRFVQNFTDIDDKILKRASDE------NSSMTAVSERNIDAFHADMDSLGILRPDSM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP 180
           PRAT  +  +  LI+ +   G AY A  ++ F       YG  S R + EQ+   G RV 
Sbjct: 113 PRATQCLDGIRALIRELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQENAGGRVA 172

Query: 181 EKYH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +     K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DAEGARKQHPFDFALWKAAKEGEPSFPSPWGAGRPGWHIECSAMVRAELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   E  A +W+HNG +N+ G+KMSKS GNF TI  LLE+    
Sbjct: 233 DLVFPHHENEIAQSEAATGQE-LAQVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSK------WPQTST 342
                   +RL +L  HYR+P+DF            + L  A  L  +      WP T  
Sbjct: 288 --GVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERHGQSLEWPATPA 345

Query: 343 SK---------------GIIDPAVLSALYNDLNTVSAIQALHKLAR-------------E 374
                              +    + A+ +DLN+  A+  L  LA+              
Sbjct: 346 LAPVALVGPSNHPSEPLEPLQQRFIDAMDDDLNSSGALAVLFDLAKPLRALANRLERGDR 405

Query: 375 STKNHDLLP-------IFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLK 421
           + +  D L        +    A +LG+      E      +      I+  +  R+    
Sbjct: 406 ADRPADELAALALRWRLLRDLAAVLGLRCEADSETSGPGDDSTNQDEIQAAIDARIAAKS 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K ++ AD IR++L+++G  L D         +T W ++
Sbjct: 466 AKNYAEADRIREELKAQGIELIDKPGG-----ITEWIRR 499


>gi|227489407|ref|ZP_03919723.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227090585|gb|EEI25897.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 451

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 156/469 (33%), Positives = 241/469 (51%), Gaps = 41/469 (8%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +IY++  R + +F    P +  +Y+CG TV    HIG+ R  + FD+L   L     +  
Sbjct: 4   RIYDSKTRTLQDFVPARPGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLD-- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
             +VRN+T+IDDKI+ +A +               + + + F +    L    P+ +PRA
Sbjct: 62  TAFVRNVTNIDDKILTKAAEN------GRPWWEWAATHERAFNEAYRILGVTPPSIEPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           T HI ++I  +Q II +GH Y A+  +    ++I  YG  S ++IDE   G        K
Sbjct: 116 TGHITEIIEYMQRIIDNGHGYAADGNVYATPATIEGYGELSGQRIDELDQGESA--GTGK 173

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++P DF LWK + P EP W +PWG GRPGWHIEC+AMS+ YLG  FDIH GGLDL FPHH
Sbjct: 174 RDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHIECTAMSTKYLGSEFDIHCGGLDLKFPHH 233

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIAQ+  A   +K A  W+HNG++ + G KMSKS GN +++  ++E  +         
Sbjct: 234 ENEIAQATAA--GDKFARYWMHNGWVTMSGEKMSKSLGNVLSVPNVVELVR-------PV 284

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----AVLSALYNDLN 360
            +R  +   HYR  ++++   L EA +   +      S+G + P       ++AL +DL 
Sbjct: 285 ELRYYLGSAHYRSMLEYSEGALHEAAVGYRRIEDFVNSQGPVTPGTLPEQFVNALDDDLG 344

Query: 361 TVSAIQALHKLAREST----KNHDLLPIFNASAHILGIEVCKEHL-------NKNISIAI 409
             +A+  +H   RE      K  +L     A   ILG++   E         +  ++  +
Sbjct: 345 VPAALAVVHTTVREGNAHPEKAAELAGQVRAMTAILGVDPQSETWASANSDSSDALAKLV 404

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           E  +Q+R    + K +++AD +R  L + G  L+D  +       T WK
Sbjct: 405 EVHIQQRQKAREEKDWATADAVRDTLAAAGIELKDGAD------GTTWK 447


>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
           tauri]
 gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
           tauri]
          Length = 661

 Score =  516 bits (1329), Expect = e-144,   Method: Composition-based stats.
 Identities = 178/506 (35%), Positives = 244/506 (48%), Gaps = 78/506 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            K+ + NT+ RK   F   DP    ++MYVCG TVYD++HIG+AR  + FDVLYR  R  
Sbjct: 158 TKLWLTNTMTRKKELFIPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYR--RLM 215

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VTY RN TDIDDKII+R+ +        +    +T+K    F +D T L CL PT
Sbjct: 216 GLGYDVTYCRNFTDIDDKIIKRSNES------GETCEALTNKFIDAFHEDMTALGCLRPT 269

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT  +  +I  I+ +I  G+AYEA+ ++ F   ++P YG+ S RK D+ + G RV 
Sbjct: 270 LEPRATECVDDIIAFIERLIAKGNAYEASGDVYFSVDTLPAYGALSGRKQDDNRAGERVA 329

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNPADF LWK + P EP W SPWG GRPGWHIECSAM    LG   DIHGGG DL
Sbjct: 330 VDERKKNPADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEKMLGPTIDIHGGGQDL 389

Query: 241 IFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           +FPHHENE+AQS  A               W+HNGF+ ++  KMSKS GNF TI E+L+ 
Sbjct: 390 VFPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLD- 448

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------- 343
                  +   V+R  +L  HYR PI++T + L EA   +    QT              
Sbjct: 449 ------KYHPFVLRFMLLGAHYRAPINYTQRALEEASDRVYYLYQTLQDVRSVIRDAAVE 502

Query: 344 ----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                               +  VL +L +DLNT + +  L    +             A
Sbjct: 503 EDATKPVPMVADALKLANETEKQVLESLNDDLNTPAVMATLSAPLKSMNDFMTTKAGKKA 562

Query: 388 SAHILGIEVCKEHLNKNISI----------------------------AIEKLVQERLIL 419
              +  ++     +   +                              A+   ++ER   
Sbjct: 563 VGRVRALQALLTSIEGVLEAVGMPRGEEDVFLGELRAKALHRAGLTEDALLAKIEERKKA 622

Query: 420 LKMKKFSSADYIRKQLESKGFILEDY 445
              K F+ +D +R +L ++G  L D 
Sbjct: 623 RDAKDFAESDRLRDELSARGIGLMDG 648


>gi|284929429|ref|YP_003421951.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809873|gb|ADB95570.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 482

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 163/494 (32%), Positives = 239/494 (48%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F  ++ + ++MY CG T YDF H+G+AR  I++D +   L +   E 
Sbjct: 2   LVIYNTLTRTKEPFITLEEARVKMYCCGITTYDFCHLGHARTCIIWDTVRNYLEWIGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKI+ RA +E         +  +++K    + +D  RL     +  PR
Sbjct: 61  -VKYVQNFTDVDDKILSRAIKEKT------TMEEVSNKFINAYFEDMERLNVKKASVYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--- 181
            T+ I  +  LI  +   GHAY +  ++ FD  S  +YG  S RK+++ K G        
Sbjct: 114 VTHIIDDIQNLIGELEKSGHAYLSEGDVYFDIKSYKDYGKLSGRKLEDLKAGASGRVSLE 173

Query: 182 ---KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K  K++PADF +WK++ P E  W+S WG+GRPGWHIECSAM    LG+  D+H GG 
Sbjct: 174 DFQKNKKRDPADFAVWKKAKPTEKSWDSKWGKGRPGWHIECSAMIKKELGETIDLHVGGS 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      E  +  W HNG + ++G KMSKS GNF TI ELL+     
Sbjct: 234 DLIFPHHENEIAQSEAITGKE-LSRYWSHNGMVKVDGEKMSKSLGNFTTIRELLD----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------T 340
              +   V+RL +L THYR P+DF+   L  A                            
Sbjct: 288 --QFEPMVVRLFILQTHYRNPLDFSHNSLVAATNSWQTLSDGLLFGYQYGEKLNFKNNPA 345

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------------- 383
           +     +      A+ +D N    +  L ++A+   K  ++L                  
Sbjct: 346 TELLPDLVNRFKKAINDDFNFAGGLAVLFEIAKNLRKESNVLTHTGVTTLSSNFLETQWH 405

Query: 384 IFNASAHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
              + A +LG+E  +     E   K     I++LV++R I    K++  +D IR +L+  
Sbjct: 406 TLKSLAKLLGLEANQTTLKIELFKKLTDEEIDELVKKRKIAKNAKQYKESDLIRDKLKEN 465

Query: 439 GFILEDYKNPDNGQ 452
              L D  +     
Sbjct: 466 NITLLDMSDGSTVW 479


>gi|118587321|ref|ZP_01544748.1| cysteinyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
 gi|118432310|gb|EAV39049.1| cysteinyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
          Length = 467

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/481 (34%), Positives = 247/481 (51%), Gaps = 46/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT   K  EF+ I P  I MYVCGPTVY++ H+GNAR  I FD + R L Y   + 
Sbjct: 2   LKVFNTATLKKEEFKPIVPGKITMYVCGPTVYNYIHVGNARSSIAFDTIRRYLLYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RA++E        + + I SK  + F +DT  L  +  T + R
Sbjct: 61  -VNFVSNFTDVDDKIINRAQEE------GVSENAIASKYIKAFYEDTKPLNIIPATTRTR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP +I  + ++I  G+AYE+  ++ F      NYG  +   +++ ++G        
Sbjct: 114 ATEVIPDIIEFVSDLIDKGYAYESRGDVYFRVRKAGNYGLLAHENLEDLEVGASGRLDDG 173

Query: 185 ----KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK        W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL
Sbjct: 174 ALALKEDPLDFALWKNEPRQVIKWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHH +E+AQS      ++  + W+HNGF+N+   KMSKS GNF T++ELL +      
Sbjct: 234 AFPHHTDEMAQSEAHTG-KQFVHYWLHNGFVNVNNEKMSKSLGNFTTVHELLSSYD---- 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
                 IR  M  THYR PI+++   L  A + L +           D            
Sbjct: 289 --DPMAIRFLMTATHYRRPINYSSSELERARVELDRIRTAYRRLKNADFKIGDDPQIDQL 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE 395
                 A + A+ +D N  +A+ A+ +L R +         K+     I    A ++G+ 
Sbjct: 347 VSKQTAAFVEAMDDDFNVANALAAIFELVRLANSYVDSGDVKDKSAQEILRQIAELIGVF 406

Query: 396 VCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                E   +++   IE L+++R      K +  +D +R ++ S G+ + D  N    ++
Sbjct: 407 GISGLETKKESLPKKIELLLKKRETARINKNWQQSDQLRDEIFSLGYKVSDSSNGQQVRK 466

Query: 454 M 454
           +
Sbjct: 467 I 467


>gi|302544419|ref|ZP_07296761.1| cysteine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302462037|gb|EFL25130.1| cysteine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 466

 Score =  515 bits (1328), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/484 (33%), Positives = 254/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTGARQIRDFSPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKII ++ ++            I   N + F      L CL PT++
Sbjct: 61  D--VTFVRNVTDIDDKIIAKSAEQ------GRPWWSIGYANERAFTSAYDVLGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI +++ +I  GHAY A   + FD  S P Y   S + +D  +  +    +
Sbjct: 113 PRATGHIPEMIEMMRGLIDRGHAYAAEGNVYFDVRSYPEYLRLSNQDLDGLRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGVDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKGF--GDDFATYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++             +   +   + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFIQRVTEKAGKAVPAAADVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
             A+ +DL    A+  +H   R+                L    A   +LG++   +H +
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALTADDKEAAVARLAEVRAMLGVLGLDPLDDHWS 402

Query: 403 ------KNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 +++   ++ LV    ++R      K +++AD IR QL+  G ++ED  +    +
Sbjct: 403 GGSDRGEDLHGVVDSLVRLVLEQRQAARGRKDYATADAIRDQLQQSGLVIEDTPSGPRWE 462

Query: 453 RMTR 456
             TR
Sbjct: 463 LGTR 466


>gi|116491535|ref|YP_811079.1| cysteinyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290891135|ref|ZP_06554197.1| hypothetical protein AWRIB429_1587 [Oenococcus oeni AWRIB429]
 gi|122276283|sp|Q04DQ8|SYC_OENOB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116092260|gb|ABJ57414.1| cysteinyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|290479099|gb|EFD87761.1| hypothetical protein AWRIB429_1587 [Oenococcus oeni AWRIB429]
          Length = 467

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/481 (34%), Positives = 246/481 (51%), Gaps = 46/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT   K  EF+ I P  I MYVCGPTVY++ H+GNAR  I FD + R L Y   + 
Sbjct: 2   LKVFNTATLKKEEFKPIVPGKITMYVCGPTVYNYIHVGNARSSIAFDTIRRYLLYRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+DDKII RA++E        + + I SK  + F +DT  L  +  T + R
Sbjct: 61  -VNFVSNFTDVDDKIINRAQEE------GVSENAIASKYIKAFYEDTKPLNIIPATTRTR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  IP +I  + ++I  G+AYE+   + F      NYG  +   +++ ++G        
Sbjct: 114 ATEVIPDIIEFVSDLIDKGYAYESQGGVYFRVRKAGNYGLLAHENLEDLEVGASGRLDDG 173

Query: 185 ----KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK        W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL
Sbjct: 174 ALALKEDPLDFALWKNEPRQVIKWDSPWGQGRPGWHIECSVMSTKYLGYTIDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHH +E+AQS      ++  + W+HNGF+N+   KMSKS GNF T++ELL +      
Sbjct: 234 AFPHHTDEMAQSEAHTG-KQFVHYWLHNGFVNVNNEKMSKSLGNFTTVHELLSSYD---- 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
                 IR  M  THYR PI+++   L  A + L +           D            
Sbjct: 289 --DPMAIRFLMTATHYRRPINYSSSELERARVELDRIRTAYRRLKNADFKIGDDPQIDQL 346

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE 395
                 A + A+ +D N  +A+ A+ +L R +         K+     I    A ++G+ 
Sbjct: 347 VSKQTAAFVEAMDDDFNVANALAAIFELVRLANSYVDSGDVKDKSAQEILRQIAELIGVF 406

Query: 396 VCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                E   +++   IE L+++R      K +  +D +R ++ S G+ + D  N    ++
Sbjct: 407 GISGLETKKESLPKKIELLLKKRETARINKNWQQSDQLRDEIFSLGYKVSDSSNGQQVRK 466

Query: 454 M 454
           +
Sbjct: 467 I 467


>gi|315426666|dbj|BAJ48292.1| cysteinyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 475

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 165/478 (34%), Positives = 240/478 (50%), Gaps = 43/478 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+NT  R +  F+   P ++ MYVCGPTVYD AH+G+AR  + FD + R L +     
Sbjct: 2   IKIFNTYSRSLEVFEPHLPGHVTMYVCGPTVYDVAHLGHARTYVAFDAVIRFLEFMGY-- 59

Query: 65  CVTYVRNITDIDD-KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V Y RN+TD+   +     R    +  +      +  K   +F +D   L    P  QP
Sbjct: 60  RVKYARNVTDVGHLRETGEDRMIVGAERLRKHPMEVADKYMMEFFRDMDALGIRRPDIQP 119

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RA+ HIP++I  ++ ++  G+ Y  +  + FD S  P+YG  S  K +E  M  R+    
Sbjct: 120 RASMHIPEIIEAVEKLVDKGYGYVIDGSVYFDISKFPDYGKLSNIKPEELLMH-RIDPDP 178

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KK+PADF LWK S P  P  W++PWGRG PGWHIECS MS  YLG+  DIHGGG +LIF
Sbjct: 179 RKKHPADFALWKESPPSYPFSWKTPWGRGFPGWHIECSIMSMKYLGEQIDIHGGGQELIF 238

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +     W+H G L + GR M KS GNFITI + L+T       +
Sbjct: 239 PHHENEIAQSEALTGKKPFVKYWMHTGELTVGGRGMHKSYGNFITIQDALKT-------Y 291

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
           P+ V+RL +L  HYR P+D++ + + +A     K      +  +I               
Sbjct: 292 PSDVLRLFILSAHYRTPLDYSEKAMEQAAENFDKITNFYENLSLIAEEDRDKPRDPSLDE 351

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
                    + A+  D NT +A+  ++   ++     D         L  +F  +  +LG
Sbjct: 352 LGDVFKQSFIEAMSEDFNTPNALAIVYDFMKKVNTRLDDIGHEQAAHLRQLFLETCRVLG 411

Query: 394 IEVCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           +    E  +    +   ++ LV+ R  L K   +  AD IR  L  +G ++ED K  +
Sbjct: 412 LLQKIERRSSAAEVMEFVKTLVEVRRELRKRGMYDLADRIRNMLAERGIVVEDTKEGE 469


>gi|78184269|ref|YP_376704.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|109894955|sp|Q3AZ17|SYC_SYNS9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78168563|gb|ABB25660.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 499

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 172/519 (33%), Positives = 243/519 (46%), Gaps = 81/519 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MTLRLTNTLTRRTEPFTPLRPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V+N TDIDDKI++RA  E      N +++ ++ +N   F  D   L  L P   
Sbjct: 61  D--VRFVQNFTDIDDKILKRASDE------NSSMTAVSERNIDAFHADMDSLGILRPDSM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP 180
           PRAT  +  +  LI  +   G AY A  ++ F       YG  S R + EQ+   G RV 
Sbjct: 113 PRATQCLDGIRALIGELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQENAGGRVA 172

Query: 181 EKYH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +     K++P DF LWK +   EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DAEGARKQHPFDFALWKAAKEGEPSFPSPWGAGRPGWHIECSAMVRAELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   E  A +W+HNG +N+ G+KMSKS GNF TI  LLE+    
Sbjct: 233 DLVFPHHENEIAQSEAATGQE-LAQVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSK------WPQTST 342
                   +RL +L  HYR+P+DF            + L  A  L  +      WP T  
Sbjct: 288 --GVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERHGQSLEWPATPA 345

Query: 343 SK---------------GIIDPAVLSALYNDLNTVSAIQALHKLAR-------------E 374
                              +    + A+ +DLN+  A+  L  LA+              
Sbjct: 346 LAPVALVAPSNHPSEPLEPLQQRFIDAMDDDLNSSGALAVLFDLAKPLRALANRLERGDR 405

Query: 375 STKNHDLLP-------IFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLK 421
           + +  D L        +    A +LG+      E      +      I+  +  R+    
Sbjct: 406 ADRPADELAALALRWRLLRDLAAVLGLRREADSESSGPGDDSTNQDEIQAAIDARIAAKS 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            K ++ AD IR +L+++G  L D         +T W ++
Sbjct: 466 AKNYAEADRIRDELKAQGIELIDKPGG-----ITEWIRR 499


>gi|33861697|ref|NP_893258.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|61216283|sp|Q7V0W1|SYC_PROMP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33640065|emb|CAE19600.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 492

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 178/511 (34%), Positives = 254/511 (49%), Gaps = 77/511 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL + I  F+ ID   +++Y CG TVYD  H+G+AR  I +D+L R L   Y + 
Sbjct: 2   IKLFNTLSKNIEVFKPIDE-VVKIYCCGVTVYDLCHLGHARSYIAWDILRRFL--IYSDY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E      N +++ ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEE------NSSMNEVSEKNITEFHKDMDALGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I+ +   G AY    ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFIKVLEDKGFAYIRGGDVYYSVFKNKNYGKLSNQNILEQNINQQGRITTD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K+NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG+  DIH GG DL
Sbjct: 173 ESNKKENPQDFALWKKAKDNEPSFDSPWGKGRPGWHIECSAMVKDELGETIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI +LL++      
Sbjct: 233 IFPHHENEIAQSESANN-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRDLLDSGT---- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
                 +R  +L  +YR+P+DFT + L  A           +   I              
Sbjct: 288 --SPMTLRYFVLTVNYRKPLDFTDEALKSASEAWKNINVALSLFDITKKENLSIEVNETN 345

Query: 351 ---------------------VLSALYNDLNTVSAIQALHKLAR---------------E 374
                                  +AL NDLNT  AI  +++LA+               E
Sbjct: 346 EFVEETYKDMINYEISQKKIKFTNALNNDLNTAGAIAIIYELAKPLKNFINQFQRIKNLE 405

Query: 375 STKN-----HDLLPIFNASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSA 428
              N      +          +LG++  +  ++  I    I  L+ +RL   K K ++ A
Sbjct: 406 INTNEKFHLRETFKTLEELTDVLGLKKEEIIIDNRINEDQILSLINKRLGAKKEKDYAEA 465

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           D IR  L+ KG  L D         +T W +
Sbjct: 466 DKIRNLLKEKGVELID-----QSPELTTWVR 491


>gi|71892086|ref|YP_277816.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|109894884|sp|Q493A1|SYC_BLOPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71796192|gb|AAZ40943.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 473

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 179/493 (36%), Positives = 246/493 (49%), Gaps = 58/493 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL +K  +F  I+   I++YVCG TVYD  H+G+AR  IVFD + R LR+   + 
Sbjct: 2   LKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V+YVRNITDIDDKII+RA         N+    +T++  Q+   D   L  L P ++P+
Sbjct: 61  -VSYVRNITDIDDKIIKRA------YENNETTQQLTNRMIQEMHLDLDALNILRPNYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI  +I  I  +I   HAY A N +I+F   ++ NYG  S ++   +     +    
Sbjct: 114 VTEHIDIIIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKENPPKIHDNILKIPN 173

Query: 184 HKKNPADFILWKRS----TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            KKNP DF+LWK++       EP W SPWG GRPGWHIECSAM+    G   DIHGGG D
Sbjct: 174 IKKNPMDFVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGSD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH+NEIAQS CA      ANIW+H+G L L   KMSKS  NF TI ++L       
Sbjct: 234 LIFPHHDNEIAQSVCAHETS-YANIWMHSGLLLLNYEKMSKSLNNFFTIRDIL------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------- 349
           + +    IR  ++  HYR  + +    L  A+  L +                       
Sbjct: 286 KHYDPETIRFFLMSAHYRSQLKYNDNNLKNAQTSLKRLYIALRDTNPTIQPNGGDNEGEY 345

Query: 350 ---AVLSALYNDLNTVSAIQALHKLAREST----KNHDLL-----PIFNASAHILGI--- 394
                +S + +D NT  A   L  +A        K H LL           A+I+G+   
Sbjct: 346 FISKFISKMNDDFNTPEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANIIGLLHQ 405

Query: 395 -------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                  ++  +H        I+KL+Q R +  K  ++  AD IRK+L   G  LED   
Sbjct: 406 NPEIFLKKITLKHNKNRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGPT 465

Query: 448 PDNGQRMTRWKQK 460
                 +T+W  K
Sbjct: 466 G-----ITKWHFK 473


>gi|291453078|ref|ZP_06592468.1| cysteinyl-tRNA synthetase 1 [Streptomyces albus J1074]
 gi|291356027|gb|EFE82929.1| cysteinyl-tRNA synthetase 1 [Streptomyces albus J1074]
          Length = 486

 Score =  515 bits (1327), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/482 (34%), Positives = 252/482 (52%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   + 
Sbjct: 23  IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQSAPHIGHIRSGLNFDILRRWFAYRGYD- 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN+TDIDDKII+++ ++            I  +N + F      L CL PT++PR
Sbjct: 82  -VTFIRNVTDIDDKIIKKSAEQERPWW------AIGYENERAFNNGYDALGCLPPTYEPR 134

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+MI +++ +I  GHAYEA+  + FD  S P Y   S + +DE +  +    +  
Sbjct: 135 ATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSFPEYLELSNQDLDELRQPSG-EGETG 193

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+FPH
Sbjct: 194 KRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVFPH 253

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W  
Sbjct: 254 HENEIAQAKAY--GDDFATYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHWRP 304

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE   ++             +T      + PA   
Sbjct: 305 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFMQRVTEKAGETPEPATEVPPAFAE 364

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK------ 398
           A+ +DL    A+  +H   R+                L    A   +LG++         
Sbjct: 365 AMDDDLGVPQALAVIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPYDPHWAGE 424

Query: 399 ----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               E L+  +   +  ++ +R      K +++AD IR QL+  G ++ED          
Sbjct: 425 ADRGEDLHGAVDTLVRLVLDQREAARTRKDWATADAIRDQLQQSGLVIEDSPTGPRWTLG 484

Query: 455 TR 456
            R
Sbjct: 485 PR 486


>gi|113954599|ref|YP_730137.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|113881950|gb|ABI46908.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 498

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 175/515 (33%), Positives = 243/515 (47%), Gaps = 79/515 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++  N+L  +   F+ ++P    +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 2   SSLRFTNSLTSRTEAFEPLEPGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTY++N TDIDDKI+ RA +E         +  ++ +N + F  D  RL  L     
Sbjct: 62  D--VTYIQNYTDIDDKILNRASEE------GSTMQAVSERNIEAFEIDMGRLNILPADRM 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  I  +  LI  +   G AY ++ ++ FD S   +YG  S R  +EQ+ G      
Sbjct: 114 PRATCCIEGIQTLIAELETKGAAYSSDGDVYFDISKAKDYGKLSGRDPNEQQQGASGRTA 173

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  KK+P DF LWK S   EP W+SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 174 DGEESRKKHPFDFALWKGSKVGEPSWDSPWGPGRPGWHIECSAMVRQELGLTIDIHLGGG 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+     A +W+HNG +N+ G KMSKS GNF TI  LLE+    
Sbjct: 234 DLVFPHHENEIAQSETANGA-PLARLWMHNGMVNVGGTKMSKSLGNFTTIRALLES---- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------- 337
                A  +RL +L  HYR+P+DFT + L  +                            
Sbjct: 289 --GLSAMALRLFVLQAHYRKPLDFTAEALEASTTGWKGLNAALKLGETHAAALEWSDHTA 346

Query: 338 ---------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------------- 373
                             ++    +A+ +DLN+  A+  L +LAR               
Sbjct: 347 LSNAAVQAGRNAQGPFEDLEQRFTAAMDDDLNSSGALAVLFELARPLRGLANRLDRGDQP 406

Query: 374 -----ESTKNHDLLPIFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMK 423
                E T+ H    +    A +LG+     E      +   + AIE+ +  R    + K
Sbjct: 407 EQPGEELTQLHSRWLLLRELAAVLGLRSETDESQPSENSGVDAQAIEQAIANRKAAKQEK 466

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +  AD IRK L  +G  L D         +T W+
Sbjct: 467 NYQEADRIRKSLSDQGIELIDKPGG-----LTDWR 496


>gi|326202353|ref|ZP_08192222.1| cysteinyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987471|gb|EGD48298.1| cysteinyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 461

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 158/464 (34%), Positives = 229/464 (49%), Gaps = 29/464 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R+  +F+ ID   +R+Y CGPTVY++AHIGN R  +  D+L R+L Y     
Sbjct: 1   MKVYNTLSRQKEDFKPIDDKEVRIYSCGPTVYNYAHIGNLRTYVFMDILRRVLEYNGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLAPT 120
            + +V NITD+   + +    E   I            I    T  F+KD   L    P 
Sbjct: 59  SLKHVMNITDVGHLVSDEDEGEDKMIKGAREQKKTPLEIAEYYTNIFMKDIKALNIQVPE 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             P+AT HIP+M+  +  ++  G  YE ++ I FD      YG  SR  +++Q  G RV 
Sbjct: 119 IVPKATEHIPEMLEFVHGLVDKGFGYETSDGIYFDIQKFEGYGKLSRANLEDQIAGARVE 178

Query: 181 EKYHKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               K +PADF +WK++       W S WG G PGWHIECSAM   YLG  FDIH GG+D
Sbjct: 179 VNEEKHHPADFAIWKKAPKEHIMQWPSEWGMGYPGWHIECSAMGRKYLGDTFDIHTGGVD 238

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            I  HHENEIAQS      +   N W+H  F+ +   KMSKS GN  TI+ L+E      
Sbjct: 239 HIPVHHENEIAQSEALL-EKSAVNYWMHGEFMMVNNGKMSKSLGNTYTIDNLME------ 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIIDPA----- 350
           + +     R   L  HYR  ++FT + +  A++   ++ +   S    K  +D A     
Sbjct: 292 KGYDPMAFRYMCLNAHYRNKLNFTWEVMQSAQVSYDRFVEGVLSHKDGKEQLDSAVVKEF 351

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL---NKN 404
                 A+ +DLN   A+       R   K+ ++  +      I G  + K+        
Sbjct: 352 LSDFEDAINDDLNIPKALGVAWNAIRYGKKSQEIYELLTKMNKIFGFNLDKKKDSTGETE 411

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           IS  ++KL++ER      K +  +D IR +L++ GF +ED  N 
Sbjct: 412 ISPEVQKLLEERQEARAQKNWKRSDEIRDELKAMGFAVEDTANG 455


>gi|148242769|ref|YP_001227926.1| cysteinyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851079|emb|CAK28573.1| Cysteinyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 511

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 167/499 (33%), Positives = 241/499 (48%), Gaps = 63/499 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++  N+L  +   F+ ++     +Y CG TVYD  H+G+AR  I +DVL R L +   +
Sbjct: 32  SLRFTNSLTSRTEAFEPLEAGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGYD 91

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYV+N TDIDDKI++RA +E        ++  ++ +N + F  D  RL  L     P
Sbjct: 92  --VTYVQNYTDIDDKILKRAAEE------GSSMQAVSERNIEAFEIDMGRLNILPADRMP 143

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
           RAT  I  +  LI+ +   G AY A+ ++ F  +   +YG  S R  +EQ+ G       
Sbjct: 144 RATRCIDGIQQLIRELEAKGAAYSADGDVYFAVAKANDYGKLSGRDPNEQQQGASGRTAE 203

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E+  K++P DF LWK +   EP W+SPWG GRPGWHIECSAM    LG   DIH GG D
Sbjct: 204 GEESRKRHPFDFALWKGAKEGEPSWDSPWGPGRPGWHIECSAMVRQELGLTIDIHLGGGD 263

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQS  A+     A +W+HNG +N+ G KMSKS GNF TI  LL++     
Sbjct: 264 LVFPHHENEIAQSETANGT-TLAKLWMHNGMVNVGGTKMSKSLGNFTTIRALLDS----- 317

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------Q 339
                  +RL +L  HYR+P+DFT + L  A                            +
Sbjct: 318 -GVSPMTLRLFVLQAHYRKPLDFTAEALDAAANGWKGLNSALLLGERHGEALGWSSGAGE 376

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------- 383
            S+         + A+ +DLN+   +  L +LAR      + L                 
Sbjct: 377 LSSELEEQRQRFIEAMDDDLNSSGGLAVLFELARPLRALANRLERGDAITADDQGLAGQW 436

Query: 384 -IFNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            +    A  LG+  E+     + +    I  L++ R      K +  AD IR +L+++G 
Sbjct: 437 QLLQDLAGALGLATEITAPSSDGDDGARISDLIEARKSAKANKDYGEADRIRAELKAEGI 496

Query: 441 ILEDYKNPDNGQRMTRWKQ 459
            L D         +T W +
Sbjct: 497 ELIDKPGG-----ITDWIR 510


>gi|270339596|ref|ZP_06005360.2| cysteine-tRNA ligase [Prevotella bergensis DSM 17361]
 gi|270334442|gb|EFA45228.1| cysteine-tRNA ligase [Prevotella bergensis DSM 17361]
          Length = 498

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/502 (32%), Positives = 240/502 (47%), Gaps = 53/502 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK+ + +YNTL R    F+ +   N+ MYVCGPTVY   H+G+ARP I FDVL+R L++ 
Sbjct: 3   MKQNLLVYNTLTRSKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVLFRYLKHL 62

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                I    T ++ K    L  
Sbjct: 63  GYQ--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEIAQHYTNRYHKAMEALNV 120

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD +       YG  S R + + 
Sbjct: 121 LPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVAKYDKDHKYGILSGRNLTDI 180

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              +R       K+N ADF LWKR+ P     W SPW  G PGWH EC+AM   YLG  F
Sbjct: 181 INNSRELSGTDEKRNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYLGDHF 240

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQ+  A + E+    W+HN  + + G+KM KS GNFIT+ + 
Sbjct: 241 DIHGGGMDLVFPHHECEIAQA-VASQGEQMVRYWMHNNMITINGQKMGKSLGNFITLEQF 299

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------- 337
                +   +++    IR  +L  HYR  +DF+   L  A+  L K              
Sbjct: 300 FNGDHESLEQAYSPMTIRFFILSAHYRGTVDFSNDALKAAKKGLEKLMTGIADLDRIQPS 359

Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPI 384
               P T+     +   +  A+ +DL T   I AL +                  DL  +
Sbjct: 360 KGSQPDTAKFVKALRQRLYDAMNDDLQTPLVISALFEACHLVNLLLDHKTKISEDDLKEL 419

Query: 385 FNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLE 436
            +        +LG++  +   N+    A    +E +++ R    + K ++++D IR  L 
Sbjct: 420 SDTMHVFTFDLLGLQNEQGESNEVREEAYGKVVEMVLKLRQQAKEAKDWATSDEIRDALA 479

Query: 437 SKGFILEDYKNPDNGQRMTRWK 458
             GF ++D K+         WK
Sbjct: 480 EAGFEVKDTKD------GVTWK 495


>gi|229067855|ref|ZP_04201172.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229188375|ref|ZP_04315423.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228595049|gb|EEK52820.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228715214|gb|EEL67073.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 440

 Score =  515 bits (1326), Expect = e-144,   Method: Composition-based stats.
 Identities = 163/464 (35%), Positives = 234/464 (50%), Gaps = 57/464 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNARP +VFD + R L Y   +  V YV N TD+DDK+I+ A +  
Sbjct: 1   MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + + +  I  +  + + +D T L C   T  PR T ++  +I  IQ ++  G+AYE
Sbjct: 57  ----LGEDVPTIADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           +  ++ F T     YG  S + I + + G R+     K++P DF LWK +   E  WESP
Sbjct: 113 SEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG++N+   KMSKS GNFI +++++       + +   +IR  ML  HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284

Query: 328 TEAEILLSKWPQT---------------------STSKGIIDPAVLSALYNDLNTVSAIQ 366
                 L +                                  A   A+ +D NT +AI 
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAIT 344

Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L+ +A  + +               +        ILG+E+ KE L       +    Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QK 401

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+   K + F+ +D IR  L+ +  ILED        + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439


>gi|308275277|emb|CBX31873.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 413

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 169/421 (40%), Positives = 224/421 (53%), Gaps = 45/421 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNT+ERK   F+ + P  + MYVCGPTVYD  HIG+AR +IVFDV+ + L     
Sbjct: 1   MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN TD+DDKII RA      + +      +  +  ++F +D   L     T +
Sbjct: 61  E--VTYVRNFTDVDDKIINRA------VQLGIESHEVAERYIKEFYEDMDALNIKRATIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI ++I LI+ ++    AY  + +I +      +YG  S RK+++ + G RV   
Sbjct: 113 PKATEHIDKIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEID 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K NP DF LWK   P EP WESPWGRGRPGWHIECSAMSS YLG+ FDIHGGG DLIF
Sbjct: 173 ERKNNPFDFALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNGF+N+   KMSKS GNF+ I ++L       +S+
Sbjct: 233 PHHENEIAQSEGAF-EKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDIL-------KSY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
               +RL +L  HYR PIDFT + + E+E  L K          I               
Sbjct: 285 HPDSVRLFLLSNHYRSPIDFTDKAMEESEAALDKIYSAIQRVEEIADITGKDFINYPEGY 344

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNASAHILG 393
                 ++ +D NT   I  L    R   +  D              +         ++G
Sbjct: 345 WEKFCESMDDDFNTAKGIGYLFDSVRHINRLLDENSNSDEIKTIINSIYADIRKMGDVIG 404

Query: 394 I 394
           I
Sbjct: 405 I 405


>gi|312138100|ref|YP_004005436.1| cysteine-tRNA ligase cyss [Rhodococcus equi 103S]
 gi|325674996|ref|ZP_08154683.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311887439|emb|CBH46751.1| cysteine-tRNA ligase CysS [Rhodococcus equi 103S]
 gi|325554582|gb|EGD24257.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 469

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 154/476 (32%), Positives = 238/476 (50%), Gaps = 46/476 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T+ R   +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L     
Sbjct: 1   MTLRLYDTVTRAPRDFVPLTPGHASVYLCGATVQGEPHIGHVRSGVAFDVLRRWL--LAH 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               +   + F     +L  L P+ +
Sbjct: 59  DYDVAFVRNVTDIDDKILNKAAE------AGRPWWEWAATFERSFDWAYRQLGVLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ QM+ ++Q +I +GHAY +  ++ FD  S P YG  S  K+D+   G      
Sbjct: 113 PRATGHVTQMVEMMQRLIDNGHAYASGGDVYFDVRSFPEYGRLSGHKLDDVHQGESA--G 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W +PWG GRPGWH+ECSAM+  YLG+ FDIH GGLDL+F
Sbjct: 171 AGKRDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHLECSAMAVFYLGQAFDIHCGGLDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+ CA   +  A  W+HNG++   G KMSKS GN +++  +L+  +      
Sbjct: 231 PHHENEIAQAKCA--GDDFAQYWLHNGWVTKSGEKMSKSLGNVLSVPNVLKLVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID-----PAVLS 353
               +R  +   HYR  ++++ + L EA     +      +T+   G +          +
Sbjct: 283 -PQELRYYLGSAHYRSMLEYSEEALQEAAAGYRRCESFVQRTAERAGEVQVGKWTEEFAA 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK- 403
           AL +DLN  +A+  +H   RE     +         L     A   ILG++   E     
Sbjct: 342 ALDDDLNVPAALAEIHGRVREGNIALESGDADGARALAGQVRAMLGILGVDPLDEQWTAA 401

Query: 404 --------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                    + + ++  +  R      K ++ AD +R +L + G  + D  +    
Sbjct: 402 SDDAAAMGALDVLVQAELDRRQQARADKNWAVADEVRDRLAAAGIAVTDTPSGPEW 457


>gi|254464102|ref|ZP_05077513.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685010|gb|EDZ45492.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 460

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 217/455 (47%), Positives = 276/455 (60%), Gaps = 26/455 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK   F+ ID SN+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR  YGE 
Sbjct: 8   IKLHNTKTRKKEVFEPIDASNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLREIYGED 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RN TD+DDKI  RA +    I        IT++ TQ F+ D   L  L P+H PR
Sbjct: 68  QVTYARNFTDVDDKINARAAESGRLIG------EITAETTQWFLDDMGELGALEPSHMPR 121

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+++I  GHAY A   ++F   S  + YG  S R +D+   G RV    
Sbjct: 122 ATEYIPQMVAMIEDLISKGHAYAAEGHVLFAVDSWKDRYGRLSGRSVDDMIAGARVEVAP 181

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 182 YKKNPMDFVLWKPSTDDLPGWDSPWGRGRPGWHIECSAMSYELLGETFDIHGGGNDLMFP 241

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA      A  W+HN  L +EG+KMSKS GNF T+ +LL+      + +P
Sbjct: 242 HHENEIAQSCCAHPEGDFARFWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGYP 295

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYNDLN 360
             VIRL  L THYR+P+D+T ++  EAE  L KW   +           AVL AL +DLN
Sbjct: 296 GEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTAGIEPASSAAAAVLEALADDLN 355

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL-----NKNISIAIEKLVQE 415
           +  AI  LHKLA +     D   +  ASA +LG+   +        + ++S   EKL + 
Sbjct: 356 SAGAIAELHKLAADG----DAAGLL-ASAQMLGLLTEEMGAWASAPSIDLSAFAEKLFKT 410

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           R   ++ K FS  D ++      G  +   K    
Sbjct: 411 RQKAMESKDFSEVDKLKAAYVEAGLEVRMSKTGVE 445


>gi|239981215|ref|ZP_04703739.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 466

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 164/484 (33%), Positives = 252/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFAPLTPGCVSIYLCGATVQSAPHIGHIRSGLNFDILRRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII+++ ++            I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIKKSAEQERPWW------AIGYENERAFNNGYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P+MI +++ +I  GHAYEA+  + FD  S P Y   S + +DE +  +    +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSFPEYLELSNQDLDELRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+F
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAY--GDDFATYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++             +T      + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFMQRVTEKAGETPEPATEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQALAVIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPYDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++ +R      K +++AD IR QL+  G ++ED        
Sbjct: 403 GEADRGEDLHGAVDTLVRLVLDQREAARTRKDWATADAIRDQLQQSGLVIEDSPTGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|330819286|ref|YP_004348148.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327371281|gb|AEA62636.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 476

 Score =  514 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 195/492 (39%), Positives = 263/492 (53%), Gaps = 58/492 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I++Y+TL R+    +   P    MYVCGPTVY+FAHIGNARP +VFDVL RLLR+ 
Sbjct: 1   MSDAIRLYDTLTRRKEVLRTSRPDRATMYVCGPTVYNFAHIGNARPAVVFDVLARLLRHD 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y E  + Y RN TD+DDKI   A      I        IT +    + +D   L  LAP 
Sbjct: 61  YRE--LVYARNFTDVDDKINAAAAAAALPIG------AITERYIAAYHEDMQALGVLAPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP+++ LI+ +I  GHAY A   ++F   S  +YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPEIVALIETLIARGHAYVAQGHVLFHVPSYADYGQLSGRRTEDMIAGARVE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK STP  PGW+SPWGRGRPGWH+EC+AM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTPELPGWDSPWGRGRPGWHVECTAMIGRHLGHTIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ  CA         W+HN F+ ++G+KMSKS GN + + ELL        
Sbjct: 233 IFPHHENEIAQGSCAHDA-LYCRTWVHNSFVTVDGQKMSKSLGNVLLVRELLAEA----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------TSTSKGIID 348
             P   IR A+L THYR P+ +  +RL +A   L++W                      D
Sbjct: 287 --PGEAIRFALLATHYRNPLHWNARRLAQARQTLTRWYGALACVEAHDGGPAPAQAVEPD 344

Query: 349 PAVLSALYNDLNTVSAIQALHKL------ARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
             VL+AL +DLN   AI  LH+L      A +  +  +     + SA +LG+   ++H  
Sbjct: 345 ALVLAALRDDLNVPLAISRLHELVSQLAHATDPDEQREAAARLHTSAALLGL--LRQHAP 402

Query: 403 KNISIA----------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             ++                   E LV ER    + + F+ AD +R+QL+  G +LED  
Sbjct: 403 SALAALRHQSRDPRHASLTPERAEALVAERDAARQRRDFARADALRQQLDHGGVLLEDT- 461

Query: 447 NPDNGQRMTRWK 458
                   TRW+
Sbjct: 462 -----PHGTRWR 468


>gi|119719811|ref|YP_920306.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|187631645|sp|A1RYM3|SYC_THEPD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119524931|gb|ABL78303.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 474

 Score =  514 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 173/492 (35%), Positives = 243/492 (49%), Gaps = 63/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R +  F+ ++   + +YVCGPTVYD++H+G+AR  + FDV+ R LR    + 
Sbjct: 2   LRVYNTLSRSLEVFEPVEEGRVSIYVCGPTVYDYSHVGHARTYVAFDVIKRYLRLRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITDIDDKII RAR E            I  + T+ +++   +L  L     PR
Sbjct: 61  -VVHVQNITDIDDKIINRARDE------GRDWREIVDEYTKDYLEALQKLRVL-VDVHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S R   ++KM ++     
Sbjct: 113 VTEHISEIIDFVQKLIDSGHAYVAPSGSVYFDVDTYPDYGRLSGRL--DKKMWSQEEFAS 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF LWK   P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFP
Sbjct: 171 EKKNPYDFALWKARKPGEPYWDSPWGPGRPGWHIECSVMSSKYLGRRFDIHGGGTDLIFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS      +     W+H G L + G KMSKS  N + + +L        RS+ 
Sbjct: 231 HHENERAQSEALFGEKPWVKYWMHTGMLQVRGEKMSKSLKNIVPLRDLF-------RSYD 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------- 349
             V+RL +   HYR  + F+ + L +A+  L +          +                
Sbjct: 284 PLVVRLWLATAHYRTVLQFSDEVLEQAKSNLQRLRGAVQLLKNLAKEVEPEGRLSDWELG 343

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASA 389
                        +++ +D N   A  A+ KL                    L +F    
Sbjct: 344 VFREMLDARREFYASMDDDFNASGAFAAVMKLTGLVYSQVSAKPTYLLVLRALRLFEEFN 403

Query: 390 HILGIEVCKEHLNKNISIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            +LG+      L     + +++L    V+ R  L + K +  ADYIR +L S G  L D 
Sbjct: 404 RVLGVLDEDLALGAAEVLPVDELLDLIVEVRAKLREQKNYELADYIRSKLSSLGVQLMDQ 463

Query: 446 KNPDNGQRMTRW 457
                    TRW
Sbjct: 464 ------GEKTRW 469


>gi|189501179|ref|YP_001960649.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
 gi|189496620|gb|ACE05168.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
          Length = 484

 Score =  514 bits (1325), Expect = e-143,   Method: Composition-based stats.
 Identities = 159/486 (32%), Positives = 222/486 (45%), Gaps = 49/486 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R+  EF  +      +YVCGPTVY  AH+G+A+  + FDV  + LR+     
Sbjct: 3   LHIYNSLSRQKEEFIPLHEKIASVYVCGPTVYGHAHLGHAKSYVSFDVAVKWLRHIGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLAPT 120
            VTY++NITD+     +    E                I    T+ +  D  RL    P 
Sbjct: 61  SVTYIQNITDVGHLTDDADEGEDKIARQARLEKTDPMEIAQYYTRSYYDDMDRLGVDRPN 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRV 179
             P AT HIP+ I LI+ +I  GHAYE N  + F  SS P+YG  S R   + Q  G RV
Sbjct: 121 IAPTATGHIPEQIALIEKLIAKGHAYEVNGNVYFSVSSFPDYGKLSGRTDQEAQHSGVRV 180

Query: 180 PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +  K++PADF LWK++       W SPW  G PGWH ECSAM+  YLG+  DIHGGG+
Sbjct: 181 ESRSEKRHPADFALWKKADSGHIMKWNSPWSTGYPGWHTECSAMAMKYLGETIDIHGGGM 240

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           +  FPHHE EIAQS  A   +     W+HN  + + G KM KS  N + + +L  T    
Sbjct: 241 ENKFPHHECEIAQSEAAT-DKPYVRYWMHNNMVTVNGTKMGKSLKNSVNLKDLFTTV--- 296

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSKGI 346
               P  VIR  +L +HYR  +DF+   +  +   L K  +T                  
Sbjct: 297 ----PPIVIRFFILQSHYRSSLDFSETAIRASRTGLEKLQETWHALLAATPGSEKLDTAP 352

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFNASA-HILG 393
            +     A+ +D NT  AI  L  LA+      +               IF A    ILG
Sbjct: 353 FEKRFADAMNDDFNTPVAISVLFDLAKAVNTALNSGQGLSEDSLNSCRNIFAACGRDILG 412

Query: 394 IEVC--------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           I           K    + +   +  L+  R    + + F+ +D IR +L   G  L+D 
Sbjct: 413 IIDAADTGKGGDKTAGKEVLDNVVSILLDLRKQARENRDFALSDLIRDRLADSGVTLKDT 472

Query: 446 KNPDNG 451
           ++    
Sbjct: 473 RDGTEW 478


>gi|225430454|ref|XP_002285478.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 491

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 177/499 (35%), Positives = 255/499 (51%), Gaps = 73/499 (14%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+   F+      + MYVCG T YD +HIG+AR  + FDVLYR LR+   E  V YVR
Sbjct: 1   MSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYE--VNYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RA +      + +    ++ +  Q+F  D T L CL P+ +P  ++H+P
Sbjct: 59  NFTDVDDKIIARANE------MGEDPINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           Q+I +I+ II +  AY    ++ F     P YG  S RK+++ + G RV     KKNPAD
Sbjct: 113 QIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPAD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   EP W+SPWG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIA 232

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC A +    +  WIHNGF+ ++  KMSKS GNF TI ++++        +    +RL 
Sbjct: 233 QSCAACKQSNIS-YWIHNGFVTIDSEKMSKSLGNFFTIRQVIDI-------YHPLALRLF 284

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------TSKGIIDP--------- 349
           ++ THYR PI+++  +L  A   +    QT             T K  + P         
Sbjct: 285 LIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMDQDDMTKKDSVPPHILDCINKF 344

Query: 350 --AVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLPIFNASAHIL-- 392
               L+++ +DL+T   + AL    +                +   L  +      +L  
Sbjct: 345 YNDFLTSMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKQELRLESLAALEKVIRDVLTI 404

Query: 393 ----------GIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                      +   +E     +K     I + ++ER +  K K++  +D IRK L + G
Sbjct: 405 LGLMPASYSEALLQLREKALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVG 464

Query: 440 FILEDYKNPDNGQRMTRWK 458
             L D  +       T W+
Sbjct: 465 IALMDSPD------GTTWR 477


>gi|239942334|ref|ZP_04694271.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239988799|ref|ZP_04709463.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291445792|ref|ZP_06585182.1| cysteinyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
 gi|291348739|gb|EFE75643.1| cysteinyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
          Length = 466

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 164/484 (33%), Positives = 252/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLHDTSARQIRDFVPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKSAEQ------GRPWWSIGYENERAFNDGYDVLGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P+MI +++ +I  GHAYEA+  + FD  S+P Y   S +++D+ +  +    +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLELSNQELDDLRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIF
Sbjct: 172 TGKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  AN W+HNG++ L G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAY--GDTFANYWVHNGWVTLAGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++             +T      + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKVGETVAPAADVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+  DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAAARLAEVRAMLGVLGLDPLDPQWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++ +R      K +++AD IR QL   G ++ED        
Sbjct: 403 GEGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIEDSPTGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|296106895|ref|YP_003618595.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648796|gb|ADG24643.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 413

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 171/432 (39%), Positives = 231/432 (53%), Gaps = 41/432 (9%)

Query: 47  MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
           M+ FDV+ R LR    +  VTYVRNITDIDDKII RA +         +I  +T++    
Sbjct: 1   MVAFDVMVRYLRSQGFD--VTYVRNITDIDDKIIARASERDV------SIDELTAQYIDA 52

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSF 165
              DT  L  L P H+PRAT HI  +I LIQ ++  G AY + N ++ ++  + P YG  
Sbjct: 53  MNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKL 112

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
           S + I+    G+RV     K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H
Sbjct: 113 SHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMH 172

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            LG+ FDIHGGGLDL FPHHENEIAQS  A   +  AN W+H G L + G KM+KS GNF
Sbjct: 173 ELGEQFDIHGGGLDLQFPHHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNF 231

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-- 343
            TI ++L       +     VIR  +L +HYR P++++ + L  A+  L +  Q      
Sbjct: 232 YTIADVL-------KEHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVP 284

Query: 344 --------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG 393
                             A+ +D NT  A+  L +LA E  K++   L       A ILG
Sbjct: 285 PQTADSKLDEYWQEQFNQAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILG 344

Query: 394 IE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                     +  L +   + IE+L+ ERL     + ++ AD IR  L SKG  LED   
Sbjct: 345 FLQKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELED--- 401

Query: 448 PDNGQRMTRWKQ 459
              G   T W++
Sbjct: 402 ---GATGTTWRR 410


>gi|289770190|ref|ZP_06529568.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289700389|gb|EFD67818.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 569

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 162/482 (33%), Positives = 247/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 106 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 164

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII +A ++      N     I  +N + F      L CL PT++PR
Sbjct: 165 -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 217

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S+P Y S S + +DE +       +  
Sbjct: 218 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQ-PSEDGETG 276

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DLIFPH
Sbjct: 277 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 336

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + WP 
Sbjct: 337 HENEIAQAKGF--GDAFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 387

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE    +                     + PA   
Sbjct: 388 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 447

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN 404
           A+ +DL    A+  +H   R+                L    A   +LG++         
Sbjct: 448 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGE 507

Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                     +   +  ++ +R      K +++AD IR +L   G ++ED          
Sbjct: 508 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDRLGQSGLVIEDSPQGPRWSLG 567

Query: 455 TR 456
           +R
Sbjct: 568 SR 569


>gi|227533678|ref|ZP_03963727.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227188662|gb|EEI68729.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 461

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 174/486 (35%), Positives = 248/486 (51%), Gaps = 61/486 (12%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + RK   F  + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y   +  VTYV 
Sbjct: 1   MSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYK--VTYVS 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII  A          +A   +  +    F++DTT L     T  PRA+  IP
Sbjct: 59  NFTDVDDKIINAA------HKTGEAPLDLAQRFIDAFMEDTTALGIEPATAHPRASQMIP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PEKYHKK 186
            +I  +Q++I   +AY  + ++ +      +YG  S + +DE + G        E   K+
Sbjct: 113 DIIDFVQDLIDKEYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQDELAKKE 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF LWK + P E  WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DL FPHHE
Sbjct: 173 DPIDFALWKAAKPGEISWESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDLEFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           NEIAQS      ++    W+HNGF+ +  +  KMSKS GNFIT++++ +T          
Sbjct: 233 NEIAQSEAKT-DKQFVRYWMHNGFVTIGEDDEKMSKSLGNFITVHDIRKTV-------DP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQTSTSKG 345
            V+R  M  T YR PI ++   L  A   L++                    PQ +    
Sbjct: 285 QVLRFFMAGTQYRMPIRYSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQITKQLQ 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGI 394
            +    ++A+ +D+N  + +  L  LA+   +            +DLL  ++A   I G+
Sbjct: 345 TLKDRFVTAMDDDINVQNGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAWLQIFGV 404

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               +   KN+   I+ LV+ R      K F+ +D IR QL ++G ILED        + 
Sbjct: 405 VFADQ---KNLDADIDALVKARDAARAAKDFAKSDQIRDQLAAQGIILEDT------PQG 455

Query: 455 TRWKQK 460
           TRW+++
Sbjct: 456 TRWRRQ 461


>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
 gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
          Length = 493

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 174/500 (34%), Positives = 259/500 (51%), Gaps = 74/500 (14%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + RK   F+      + MYVCG T YD +HIG+AR  + FDVL R L++   +  V YVR
Sbjct: 1   MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGFD--VHYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII RA +      + +    ++ +  ++F+ D   L CL P+ +PR ++H+P
Sbjct: 59  NFTDVDDKIIARANE------LGEDPISLSKRYCEEFLHDMVYLHCLPPSVEPRVSDHMP 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           Q+I +I+ I+ +G+AY  + ++ F    +P YG  S RK+++ + G RV     KKNPAD
Sbjct: 113 QIIDMIERILENGYAYRIDGDVYFSVDKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPAD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK +   EP W+SPWG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKSAKEGEPFWDSPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 232

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC A R    +  W+HNGF+ ++  KMSKS GNF TI +++         +    +RL 
Sbjct: 233 QSCAACRDSNIS-YWVHNGFVTIDSEKMSKSLGNFFTIRQVINL-------YHPLALRLF 284

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDPAVLS---- 353
           +L THYR P++++  +L  A   +    QT             +  K  I P  ++    
Sbjct: 285 LLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCENILSQHRVAFEKDAIPPDTINDINK 344

Query: 354 -------ALYNDLNTVSAIQALHKLAREST------------KNHDLLPIFNASAH---- 390
                  ++ +DL+T   + AL    +               K  + +            
Sbjct: 345 FHDTLVTSMSDDLHTPVLLSALSDPLKIINDMLHTRKGKKQIKRIESIAALEKMVRNALM 404

Query: 391 ILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +LG+      E  ++   K +         I + ++ER +  K K +  +D IRK L + 
Sbjct: 405 VLGLMPPTYNEALQQLREKALRRAKLTEDQILQKIEERTVARKDKDYEKSDAIRKDLAAL 464

Query: 439 GFILEDYKNPDNGQRMTRWK 458
           G  L D  +       T W+
Sbjct: 465 GIALMDSPD------GTSWR 478


>gi|256786300|ref|ZP_05524731.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 479

 Score =  514 bits (1324), Expect = e-143,   Method: Composition-based stats.
 Identities = 162/482 (33%), Positives = 247/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   + 
Sbjct: 16  IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII +A ++      N     I  +N + F      L CL PT++PR
Sbjct: 75  -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +M+ +++ +I  GHAYEA+  + FD  S+P Y S S + +DE +       +  
Sbjct: 128 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQ-PSEDGETG 186

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DLIFPH
Sbjct: 187 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 246

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + WP 
Sbjct: 247 HENEIAQAKGF--GDAFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 297

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLS 353
            V+R  +   HYR  I+++ + L EAE    +                     + PA   
Sbjct: 298 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 357

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN 404
           A+ +DL    A+  +H   R+                L    A   +LG++         
Sbjct: 358 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGE 417

Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                     +   +  ++ +R      K +++AD IR +L   G ++ED          
Sbjct: 418 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDRLGQSGLVIEDSPQGPRWSLG 477

Query: 455 TR 456
           +R
Sbjct: 478 SR 479


>gi|258648227|ref|ZP_05735696.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
 gi|260852123|gb|EEX71992.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
          Length = 495

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 159/493 (32%), Positives = 240/493 (48%), Gaps = 45/493 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+ I+NTL RK  EF+ + P  + MYVCGPTVY   H+G+ARP I FD+L+RLL+   
Sbjct: 3   EHKLFIHNTLTRKKEEFKPLHPGRVGMYVCGPTVYGDPHLGHARPAITFDLLFRLLKNEG 62

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD+     +    E                +    + +F K    L  L
Sbjct: 63  YK--VRYVRNITDVGHLEHDADEGEDKIAKKAKLEQLEPMEVAQHYSNRFHKAMDDLNVL 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQK 174
            P+ +P+A+ HI +   L+Q I+ +G+AYE N  I FD         YG  S R +++  
Sbjct: 121 PPSIEPQASGHIIEQEALVQKILDNGYAYERNGSIYFDVEKYNTKYRYGILSGRNLEDTI 180

Query: 175 MGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             +R  +    K+N  DF LWK++ P     W SPWG G PGWH EC+AM   YLG  FD
Sbjct: 181 DASRTLDGVDEKRNQVDFALWKKARPEHIMRWPSPWGDGFPGWHCECTAMGRKYLGDHFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHE EIAQ+  A+  E+    W+HN  + + G+KM KS GNFIT+ +  
Sbjct: 241 IHGGGMDLVFPHHECEIAQAVAAEG-EQMVRYWMHNNMITINGQKMGKSLGNFITLEQFF 299

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------ 345
                   + +    IR  +L  HYR  +DF+ + L  +   L +  +   + G      
Sbjct: 300 TGDHPKLDQPYSPMTIRFFILQAHYRSTVDFSNEALQASRKGLDRLMEGFATLGRLAGND 359

Query: 346 ----------IIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLP 383
                      +     +AL +DLN+   I  L    R   +               L  
Sbjct: 360 GGEITESYAEALSERCYAALNDDLNSPIVISHLFDACRLINQVAYKQTTITPDGLEALKR 419

Query: 384 IFNASA-HILGIEVCKE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           +F+  A  +LG++   +      ++   A++ L+  R      K ++++D IR  L + G
Sbjct: 420 VFSLFAFDLLGLKPEADGNAQREESFGKAVDLLLDVRQQAKAAKDWATSDKIRDDLAALG 479

Query: 440 FILEDYKNPDNGQ 452
           F ++D K+    +
Sbjct: 480 FAVKDTKDGATWK 492


>gi|251771305|gb|EES51886.1| cysteinyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 485

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 178/496 (35%), Positives = 242/496 (48%), Gaps = 52/496 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I +YN+L RK+  F    P  ++MYVCG TVYD  H+G+AR  +VFD L+RL  + 
Sbjct: 1   MPPSISLYNSLSRKVEPFIPQTPGEVKMYVCGVTVYDDCHLGHARSQMVFDTLHRL--FL 58

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V YVRNITDIDDKII +A +          I  IT    + F +D  RL  L+P 
Sbjct: 59  ETGHRVRYVRNITDIDDKIIRKAAE------AGVPIENITRTFIESFSRDMGRLGILSPE 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT  +  M+ LI  ++  G AY +  ++ F   S   YG  S + +++ + G R+ 
Sbjct: 113 REPRATEFLDSMVALIDRLLSLGSAYRSGGDVYFRVRSFSGYGGLSHQILEDLRSGARIE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK + P EP + +P+G GRPGWHIECSAMS HYLG   D+HGGG+DL
Sbjct: 173 PGEEKEDPLDFVLWKGAKPGEPSYPAPFGPGRPGWHIECSAMSLHYLGPTLDLHGGGMDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE AQS  A   +  A  W+HNGF+     KMSKS GN   I    E   F   
Sbjct: 233 LFPHHENERAQSEAATG-QTFARTWMHNGFVTTSQEKMSKSLGNTRRIRAFFEDSPF-PE 290

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQTSTSKG 345
           +     +R   L THYR P+DFT   L  A+  L                  P+     G
Sbjct: 291 AVTREWLRYFFLGTHYRSPVDFTEGGLASAKNALDGLHQCRALLLECLSAEAPEGDPIAG 350

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLPIFNASAHIL 392
            +  + + AL +DL+T  A+  LH                       ++  +F+ +   L
Sbjct: 351 PLLSSFMEALSSDLDTPVALSVLHGAKSRINPWLASGGSGSPPVDPREVRALFSLAGRTL 410

Query: 393 GIEVCKEH------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           GI                          IE+LV  R    K + F  AD +R QL + G 
Sbjct: 411 GILTTDPSSWIGGEGRDGGGGEGLSPEEIERLVHLREEARKARDFKQADALRDQLRAAGV 470

Query: 441 ILEDYKNPDNGQRMTR 456
           +LED   P    R+ R
Sbjct: 471 VLEDQ--PGGPPRIRR 484


>gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 183/515 (35%), Positives = 263/515 (51%), Gaps = 81/515 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YNT+ ++    + +    + MYVCG T YD +H+G+ R  + FDVLYR L++   
Sbjct: 5   TELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGY 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN TD+DDKII RA +      + +    ++S   Q+++ D T L CL+PTHQ
Sbjct: 65  E--VTYVRNFTDVDDKIIRRANE------LGENPLTLSSHFCQEYLDDMTDLHCLSPTHQ 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK++  + G RV   
Sbjct: 117 PRVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVD 176

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   FDIHGGG+DLIF
Sbjct: 177 SRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIF 236

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSC A   E   + W+HNG +     KMSKS GNF TI ++ +        +
Sbjct: 237 PHHENEIAQSCAA-CQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL-------Y 288

Query: 303 PAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQTSTSKGIID 348
               +R  +L THYR P++++               Q L + E  LS + + +     I 
Sbjct: 289 HPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCIA 348

Query: 349 PA-----------VLSALYNDLNTVSAI-QALHKLARESTKNHDLL-------------- 382
           PA             + + +DL+T   +  +L +  R      ++L              
Sbjct: 349 PAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVE 408

Query: 383 ------PIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMK 423
                         +LG+       EV ++   K +         +  L++ER +  K K
Sbjct: 409 SLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNK 468

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            FS  D IR  L SKG  L D        + T W+
Sbjct: 469 DFSKGDQIRADLASKGIALMDV------GKETIWR 497


>gi|34541486|ref|NP_905965.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis W83]
 gi|61216267|sp|Q7MTR6|SYC_PORGI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|34397803|gb|AAQ66864.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis W83]
          Length = 490

 Score =  514 bits (1323), Expect = e-143,   Method: Composition-based stats.
 Identities = 162/491 (32%), Positives = 237/491 (48%), Gaps = 42/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  ++IYNTL RK   F+ I   ++ +YVCGPTVY  AH+G+ARP I FD+LYR LR+ 
Sbjct: 1   MEHPLEIYNTLHRKKERFEPIHKPHVGLYVCGPTVYGDAHLGHARPAITFDLLYRYLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++      L  
Sbjct: 61  GYQ--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLTRYRHAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+  G+AYE+   + FD         YG  S R I+E 
Sbjct: 119 LPPSIEPMASGHIIEQIELVKQILKAGYAYESCGSVYFDVEKYNQDHRYGVLSGRNIEEM 178

Query: 174 KMGT-RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              T R+  +  K+N  DF LWK + P     W SPWG G PGWH EC+AM   YLG+ F
Sbjct: 179 INNTRRLDGQDEKRNGVDFALWKAAQPEHIMRWPSPWGMGFPGWHCECTAMGRKYLGEEF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQ+  A +       W+HN  + + G+KM KS GNFIT+ E 
Sbjct: 239 DIHGGGMDLVFPHHECEIAQA-VASQGHPIVRYWMHNNMITINGQKMGKSLGNFITLEEF 297

Query: 292 LETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------- 342
                    +++    IR  +L  HYR  +DF+ + L  AE  L +    +         
Sbjct: 298 FSGAHPSLNKAYSPMTIRFFILGAHYRGTVDFSNEALEAAEKGLERLLDAAALLDGLKTA 357

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------------DLLPIF 385
                  G +      A+ +DLN+   I AL   AR     H            +L   F
Sbjct: 358 DTTSVEVGDLRKRCYDAMNDDLNSPMVIAALFDAARAINAVHNGQGTITSSNLEELRTTF 417

Query: 386 NASA-HILGIEVCKEH---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 +LG+   +      ++    A++ L+  R      K ++++D IR +L + GF 
Sbjct: 418 RLFLFDLLGMRDERASSAGGSEAFGKAMDLLLSIRAEAKARKDWATSDKIRDELTALGFT 477

Query: 442 LEDYKNPDNGQ 452
           ++D K+    +
Sbjct: 478 IKDTKDGAEWK 488


>gi|51473263|ref|YP_067020.1| cysteinyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|61216180|sp|Q68XV4|SYC_RICTY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51459575|gb|AAU03538.1| Cysteine translase [Rickettsia typhi str. Wilmington]
          Length = 457

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 199/474 (41%), Positives = 279/474 (58%), Gaps = 33/474 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YNTL R    F   D +N++MYVCGPTVYD  HIGN+R ++V+D+LYR++   +G
Sbjct: 1   MQLHLYNTLTRTKEVFNPQDHANVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIIIKIFG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +K V YVRNITDIDDKII+RA        +   I+ +T+K T++F  +   L C+ P+ +
Sbjct: 61  KKAVKYVRNITDIDDKIIDRAES------LGININDLTNKVTREFHINMAYLGCMLPSIE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  MI +I+ +I   HAY  +N + FD  S PNY   S R ++E   G R+   
Sbjct: 115 PKATEHIDVMIEIIERLIAQDHAYITDNHVYFDVLSAPNYTELSNRNLEEMFEGVRIENS 174

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             KKNP DF+LWK +   EP    + SPWG GRPGWHIECSAMS  YLG+ FDIHGGG D
Sbjct: 175 KTKKNPQDFVLWKPAKQNEPKNVNFSSPWGLGRPGWHIECSAMSYKYLGENFDIHGGGAD 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH NEIAQS CA      A  WIHNGFL + G KMSKS GNFIT+ +L++      
Sbjct: 235 LIFPHHTNEIAQSRCAFPSSTYAKYWIHNGFLTVNGEKMSKSLGNFITVRDLMD------ 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSAL 355
           +     V+RL +L +HYR P+D+  + + +A+  L  W +     +  K  +    + +L
Sbjct: 289 KQIQGEVVRLFLLSSHYRRPLDYNDKAIDDAKKTLDYWYRAIKEINVQKVDLPSDFMQSL 348

Query: 356 YNDLNTVSAIQALHKLARES-TKNHDLLPIFNAS-----AHILGI--EVCKEHLNKNISI 407
           ++D+NT  AI+ ++  A+       +    FNAS     A+ +G+  +   E  N +I  
Sbjct: 349 FDDMNTPLAIKIINDYAKGVFISKTEAERKFNASAIITCANFIGLMRKTQYEWFNNDIDK 408

Query: 408 A-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             I +L+ +RL   K K +  AD IR QL  K  ILED  +       T W+++
Sbjct: 409 LYINELINKRLKAKKQKNWLLADKIRNQLLEKKIILEDKSDCT-----TIWRKE 457


>gi|308234253|ref|ZP_07664990.1| cysteinyl-tRNA synthetase [Atopobium vaginae DSM 15829]
 gi|328943535|ref|ZP_08241000.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
 gi|327491504|gb|EGF23278.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
          Length = 490

 Score =  513 bits (1322), Expect = e-143,   Method: Composition-based stats.
 Identities = 176/500 (35%), Positives = 252/500 (50%), Gaps = 71/500 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+   K  EF  ++P+ +RMYVCGPTVYD  HIGNAR  + FD++ R L+Y     
Sbjct: 1   MLIYNSKTHKKEEFIPLEPNRVRMYVCGPTVYDQIHIGNARTFLSFDIIRRYLQYKGF-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N+TD+DDKII RA ++        +   +    +  F++   R   L P  +PR
Sbjct: 59  AVVFAQNLTDVDDKIINRANEQ------GISADELAKTYSCAFIEQMHRFGILDPDIRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  M  +IQ +I  GHAY A+  ++ F   S  NYG  S R++D+ + G R+    
Sbjct: 113 ATAEIEHMQVMIQILIDKGHAYVADNGDVYFSVRSDHNYGVVSGRQLDDMRAGERIEVND 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP W+SPWG+GRPGWH EC AM   YLG   DIHGGG DL+FP
Sbjct: 173 AKRDPFDFVLWKAAKPSEPSWDSPWGKGRPGWHTECCAMIHRYLGTPIDIHGGGQDLMFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA   +  AN W+H G L ++G KMSKS GNF T+ E+L+       ++P
Sbjct: 233 HHENENAQASCAW-DKPLANYWMHAGMLRVDGEKMSKSLGNFYTLKEVLD-------AYP 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPA--- 350
           A  +RL ML THYR P+DF+ +RL  A   L K            + S   G +  A   
Sbjct: 285 ADAVRLLMLQTHYRAPLDFSFERLNGARGTLQKLIGCVENLRWSAEQSGESGALGKAEQA 344

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFN 386
                        + + +D N   A+ A+  L   + K  +                +  
Sbjct: 345 LGNAVDHAQIEFETQMDDDFNAAGALAAIFNLMAHANKYLEEAGAHPCVAPMLRCADMLC 404

Query: 387 ASAHILG--------------IEVCKEHLNKNISIAIEK---LVQERLILLKMKKFSSAD 429
               +LG              I++ ++   ++ S   E    L+  R      K ++ AD
Sbjct: 405 ELCSVLGITLAAKTSELPAEIIDLAQKVTQQSASSCEEAARLLIMARAEARSNKDWTRAD 464

Query: 430 YIRKQLESKGFILEDYKNPD 449
            IR  +   G ++ED  N  
Sbjct: 465 AIRDGIAELGLMVEDTANGT 484


>gi|296115000|ref|ZP_06833644.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295978462|gb|EFG85196.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 452

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 189/470 (40%), Positives = 259/470 (55%), Gaps = 35/470 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ ++++  RK   F  +DP N+R+Y CGPTVYD AHIGN R M+  DVL RLLR+ Y 
Sbjct: 2   PRLSLHDSKSRKTVAFTPLDPENVRVYYCGPTVYDLAHIGNLRAMVTADVLVRLLRHLY- 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI  RAR+       N+ I+ +T++    F +D   ++ L P  +
Sbjct: 61  -PHVTYVRNITDVDDKINARAREN------NEPITALTARTIHDFHQDLAAVSILPPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI QM  +I  +I +GHAYEA   ++F  +   +YG  S R  D+   G RV   
Sbjct: 114 PRATHHIEQMQRMISELIDNGHAYEAEGHVLFSVADYSDYGGLSGRSADDLMAGARVDVA 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+ P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS HYLG+ FDIHGGG DL+F
Sbjct: 174 DYKRAPGDFVLWKPSDVDTPGWDSPWGRGRPGWHIECSAMSYHYLGESFDIHGGGSDLLF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS C     + AN W+HN  L ++G KMSKS GNF+T+ ++L          
Sbjct: 234 PHHENERAQSMCCHPHGRFANHWVHNAMLLVDGEKMSKSLGNFLTVRDVLRDTPAEALRL 293

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSA 354
                        YR  ++FT   L +A   L ++ +        D A         + A
Sbjct: 294 LLLR-------AQYRSVLNFTRDGLDDARQTLDRFYRALAMLNDGDAAGTTPPPDVFVRA 346

Query: 355 LYNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGI-----EVCKEHLNKNISIA 408
           L  DLNT +AI  +H +A R    +        A+  ++G+     +       +  +  
Sbjct: 347 LCEDLNTPAAIAEMHAMANRALAGDAQAARDLRAAGRLIGLLGSTPDTWFRGDAQLDTAK 406

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           I+ L+ ERL   K + F+ AD IR +L  +G  LED      G   T W+
Sbjct: 407 IQALIDERLAARKARDFARADAIRDELAQQGIALED------GPGGTTWR 450


>gi|163785456|ref|ZP_02180059.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879275|gb|EDP73176.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 436

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 158/452 (34%), Positives = 233/452 (51%), Gaps = 51/452 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNTL  +  EF  I+P  +++Y CG TVYD  H+G+ R +IVFD++ R LRY   
Sbjct: 1   MSLKVYNTLSGQKEEFVPINPGEVKIYTCGVTVYDVNHVGHGRSLIVFDMIRRYLRYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN TD+DDKII RA+ E          ++I  +  +++ +D           +
Sbjct: 61  N--VKFVRNFTDVDDKIINRAKNECLP------FTVIADRYIKEYFQDAENFRIEPADVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HIP +I  IQ +I  G+AYE   ++ F      +YG  S+R +DE   G RV   
Sbjct: 113 PRVTTHIPDIIDFIQKLIDKGYAYEVEGDVYFSVRKFKDYGKLSKRSVDELIAGARVEPG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DF LWK S   EP W+SPWG+GRPGWH EC AM   +LG+  DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQ+      +  A  WIHNG + + G+KMSKS GN+IT+ E+          +
Sbjct: 233 PHHENELAQAEALS-EKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
              ++RL +L  HYR P+DF+ +++ E +    +         I+               
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWEKMEETKKAYERLKNAMDEYEILEKLPENPDFEGHLYD 344

Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI 391
                +    +A+ +D NT  A+ AL  L RE     D            L  +  +A +
Sbjct: 345 AIAKAEQGFYAAMSDDFNTPEALAALFSLVREMNILKDKAVKEGGISKKALASYKEAAEV 404

Query: 392 L---GIEVCKEHLNKNISIAIEKL-VQERLIL 419
           L   G ++     +    + +E++ V+++   
Sbjct: 405 LHKIGKDIFGLFDSLQPCVEVEQIQVEKKEEA 436


>gi|313114813|ref|ZP_07800313.1| cysteinyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622868|gb|EFQ06323.1| cysteinyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 465

 Score =  513 bits (1321), Expect = e-143,   Method: Composition-based stats.
 Identities = 178/479 (37%), Positives = 257/479 (53%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y     
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E        ++  +  +   +++KD   L C  PT QPR
Sbjct: 59  KVFYVSNITDIDDKLIKKGQEE------GTSMKEVAQRFEAEYLKDAAGLNCKKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--- 180
           AT HI Q++ +++++I  GHAY A N ++ F   S P YG  S  K+D+ + G R     
Sbjct: 113 ATEHIQQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172

Query: 181 -EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +   K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MDDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A  W+HNGF+N++ +KMSKS  NF T+ ++ +      
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDVADV----- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------QT 340
             +    IR  ML   YR P+++TV  +   +  L +                       
Sbjct: 287 --YGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALTKDAFGTDETL 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHI 391
                       +A+ +DLNT  A+ A+  L +E                   F+    +
Sbjct: 345 KEKAAEARTKFCTAMDDDLNTPDALAAVFDLVKEINTLSAVSSKDALQTAAAAFDEITGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D      
Sbjct: 405 LGLLYNRKK--DEVPAEVTELVEKRAAAKKAKDWATADAIRAQLTELGWAVKDTAQGPQ 461


>gi|315428011|dbj|BAJ49600.1| cysteinyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 475

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 165/478 (34%), Positives = 239/478 (50%), Gaps = 43/478 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+NT  R +  F+   P ++ MYVCGPTVYD AH+G+AR  + FD + R L +     
Sbjct: 2   IKIFNTYSRSLEVFEPHIPGHVTMYVCGPTVYDVAHLGHARTYVAFDAVIRFLEFMGY-- 59

Query: 65  CVTYVRNITDIDD-KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
            V Y RN+TD+   +     R    +  +      +  K   +F +D   L    P  QP
Sbjct: 60  RVKYARNVTDVGHLRETGEDRMIVGAERLRKHPMEVADKYMMEFFRDMDALGIRRPDIQP 119

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RA+ HIP++I  ++ ++  G+ Y  +  + FD S  P+YG  S  K +E  M  R+    
Sbjct: 120 RASMHIPEIIEAVEKLVDKGYGYVIDGSVYFDISKFPDYGKLSNIKPEELLMH-RIDPDP 178

Query: 184 HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KK+PADF LWK S P  P  W++PWGRG PGWHIECS MS  YLG+  DIHGGG +LIF
Sbjct: 179 RKKHPADFALWKESPPSYPFSWKTPWGRGFPGWHIECSIMSMKYLGEQIDIHGGGQELIF 238

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +     W+H G L + GR M KS GNFITI + L+T       +
Sbjct: 239 PHHENEIAQSEALTGKKPFVKYWMHTGELTVGGRGMHKSYGNFITIQDALKT-------Y 291

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
           P+ V+RL +L  HYR P+D++ + + +A     K      +  +I               
Sbjct: 292 PSDVLRLFILSAHYRTPLDYSEKSMEQAAENFDKITNFYENLSLIAEEDRAKPRDPSLDE 351

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
                    + A+  D NT +A+  ++   ++     D         L  +F  +   LG
Sbjct: 352 LGDVFKQSFIEAMSEDFNTPNALAIVYDFMKKVNTRLDDIGHEQAAHLRQLFLETCRALG 411

Query: 394 IEVCKEHLNKNISI--AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           +    E  +    +   ++ LV+ R  L K   +  AD IR  L  +G ++ED K  +
Sbjct: 412 LLQKIERRSSAAEVMEFVKTLVEVRRELRKRGMYDLADRIRNMLAERGIVVEDTKEGE 469


>gi|294637579|ref|ZP_06715861.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089250|gb|EFE21811.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 363

 Score =  512 bits (1320), Expect = e-143,   Method: Composition-based stats.
 Identities = 152/378 (40%), Positives = 217/378 (57%), Gaps = 26/378 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRN+TD+DDKII+RA +        ++   +T +   +  +D   L    P  +PR
Sbjct: 60  TLKYVRNVTDVDDKIIKRALENK------ESCEQLTERMLAEMHRDFDALNIARPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L++ +I  GHAY A N +++F   + P+YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIAEIIALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVAE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDGA-YVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSA 354
           A  +R  ++  HYR  ++++ + L +A   L +               +    +    +A
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDATAQPAADEAFEGRFRAA 345

Query: 355 LYNDLNTVSAIQALHKLA 372
           + +D NT  A   L  +A
Sbjct: 346 MDDDFNTPEAYSVLFDMA 363


>gi|294630050|ref|ZP_06708610.1| cysteinyl-tRNA synthetase [Streptomyces sp. e14]
 gi|292833383|gb|EFF91732.1| cysteinyl-tRNA synthetase [Streptomyces sp. e14]
          Length = 466

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 162/489 (33%), Positives = 249/489 (50%), Gaps = 54/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   +   
Sbjct: 1   MTIRLYDTSARQIRDFTPLKPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFSHRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT++RN+TDIDDKII +A ++H           I  +N + F    T L CL P+++
Sbjct: 61  E--VTFIRNVTDIDDKIITKAHEQHRPWW------SIGYENERAFNDGYTALGCLPPSYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P+M+ +++ +I  GHAY A+  + FD  S P Y   SR+++D   +      +
Sbjct: 113 PRATGHVPEMVEMMRRLIERGHAYAADGNVYFDVRSFPGYLELSRQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP W +PWG GRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPTWPTPWGEGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAY--GDEFARYWVHNAWVTMAGDKMSKSLGNSVLVSEMV-------KQW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVL 352
              V+R  +   HYR  I+++ + L EAE   ++                    + PA  
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFIQRVVEKAGPVEPSAEVPPAFA 342

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
            A+ +DL    A+  +H   R+                L    A   +LG++   E    
Sbjct: 343 EAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEQWAG 402

Query: 404 N-----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                       +   +  ++ +R      K +++AD IR QL   G ++ED        
Sbjct: 403 EGGDRGEDLHGVVDTLVRMVLDQREAARARKDWTTADAIRDQLGQSGLVIEDS------P 456

Query: 453 RMTRWKQKP 461
           +  RW   P
Sbjct: 457 QGPRWSLGP 465


>gi|188584469|ref|YP_001927914.1| cysteinyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347967|gb|ACB83379.1| cysteinyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 462

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 207/482 (42%), Positives = 281/482 (58%), Gaps = 49/482 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFAPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG + VTY RN+TD+DDKI  RA      +     I  +T     QF KD   L  L   
Sbjct: 61  YGPEHVTYARNVTDVDDKINARA------LERGITIRALTDGTLAQFHKDIRDLGVLMAE 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M  LI+ ++  GHAY A   ++FD  S+P+YG+ S+R 
Sbjct: 115 DVNRAGEPARFIEPRATDHIGEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK S   EP W SP G    GRPGWHIECSAMS  +
Sbjct: 175 LDEMEAGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDAPGRPGWHIECSAMSWKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LGK FDIH GG+DLIFPHHENE+AQS C    +  A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGKTFDIHAGGIDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---TSTS 343
           TI ++L+        WP  V+RL ML THYR+PID+T++ L E+  +L +W +    +  
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              +   V+ AL +DLNT +AI  LH+LA              A A ++G     +   +
Sbjct: 348 DAAVPGGVVEALGDDLNTPAAIGELHRLAGSD------AGALKAGAGLMGFLPTTKAKRE 401

Query: 404 N--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        +E L+ ER      K ++++D +R  L + G  ++D K+       T
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTALGVSVKDNKDGT-----T 456

Query: 456 RW 457
            W
Sbjct: 457 TW 458


>gi|124028047|ref|YP_001013367.1| cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978741|gb|ABM81022.1| Cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 490

 Score =  512 bits (1319), Expect = e-143,   Method: Composition-based stats.
 Identities = 177/498 (35%), Positives = 240/498 (48%), Gaps = 66/498 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++ NT   K+ EF+ + P  +RMYVCGPTVYD+ H+G+AR  + FD + R LR    
Sbjct: 13  PPIRVRNTFGGKLEEFKPLRPGLVRMYVCGPTVYDYTHLGHARTYVAFDAIKRYLRLRGY 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V+NITDIDDKII RAR+E            I     + + +    L        
Sbjct: 73  N--VYHVQNITDIDDKIINRAREE------GKDWREIVETYAKDYFEGLRALRIKI-DMH 123

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR T+HI ++I  I+ +I  G+AY A +  + F+    P+YG  S R    ++       
Sbjct: 124 PRVTSHIREIIEFIEGLIDKGYAYVAPSGSVYFEVDKYPDYGRLSGR-FHPEEWRQEEDV 182

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF LWK   P EP WE+PWGRGRPGWHIECS M+S YLG  FDIHGGG DLI
Sbjct: 183 LKEKKNPYDFALWKAWKPGEPYWEAPWGRGRPGWHIECSVMASRYLGDQFDIHGGGQDLI 242

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS      +     W+H G+L + G KMSKS GN I + E L       + 
Sbjct: 243 FPHHENERAQSEAYFGKKPWVRYWLHTGYLTIRGEKMSKSLGNIIPLREAL-------KK 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----GIIDP-------- 349
           W    +RL +L  HYR  +DF+ + L +A+  L +              +DP        
Sbjct: 296 WSPETLRLWILSAHYRTQLDFSEESLEQAKANLRRLRGALQGLQRIIEEVDPQSRLGDSE 355

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG---- 393
                           A+ ND NT  A+ A  KL +      ++LP  N +A IL     
Sbjct: 356 AKLVNTVLTLYKEFHEAMSNDFNTSRALAAALKLVKTVN--AEILPAENYTAAILAYRTL 413

Query: 394 IEVCK-------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +E  +             +   K +   ++ +V+ R  L   K +  AD IR +L   G 
Sbjct: 414 LEFNEVFAVLDDIVYGVAQQAQKLVGKLVDLIVKVRAELRARKMYELADNIRAELGELGI 473

Query: 441 ILEDYKNPDNGQRMTRWK 458
            L DY         T W+
Sbjct: 474 KLYDYPGGK-----TTWR 486


>gi|254474999|ref|ZP_05088385.1| cysteinyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214029242|gb|EEB70077.1| cysteinyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 525

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 195/458 (42%), Positives = 265/458 (57%), Gaps = 23/458 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  R       I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR  YG  
Sbjct: 61  IKLHNTRTRGKEVLDPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLREVYGPD 120

Query: 65  CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            V+Y RN TD+DDKI   A   ++      + + +   T +    ++ D   L  L P H
Sbjct: 121 HVSYARNFTDVDDKINATAVARKEAGAPGTLEELVQERTEETISWYLADMAELGALEPDH 180

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PRAT +IPQMI +I+ +I  GHAY +    ++F   S  +YG+ S R +D    G RV 
Sbjct: 181 MPRATAYIPQMIAMIEELIAKGHAYPDGAGHVLFSVKSYKDYGALSGRSVDAMIAGARVE 240

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS    G+ FDIHGGG DL
Sbjct: 241 VADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGESFDIHGGGNDL 300

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA      A IW+HN  L +EG+KMSKS GNF T+ +LLE      +
Sbjct: 301 MFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------Q 354

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYN 357
            +P  VIR   L THYR+P+D+T ++  EAE  L KW   +           AV++AL +
Sbjct: 355 GYPGEVIRFVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTAGIEPAPSAAAAVIAALSD 414

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
           DLNT  A+  LHKLA              ASA ++G+   +     +    ++S+  + L
Sbjct: 415 DLNTAGAVAELHKLASGGD-----AASLLASAQLMGLLTEELGAWAKGEEVDLSVYEKAL 469

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
              R + ++ K F+  D ++      G  +   K    
Sbjct: 470 FDARTVAMESKDFAEVDRLKSAYLEAGVEVRMSKAGVE 507


>gi|126726937|ref|ZP_01742776.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126703895|gb|EBA02989.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 464

 Score =  512 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 199/457 (43%), Positives = 256/457 (56%), Gaps = 22/457 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +IK+YNT  RK   F  +D +++RMYVCGPTVYD AHIGNARP+IVFDVLYRLLR  YG
Sbjct: 2   TEIKLYNTATRKKGVFTPLDTNDVRMYVCGPTVYDRAHIGNARPVIVFDVLYRLLREVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
            + V Y RN TD+DDKI   A   +       + + I   T +    ++ D   L  + P
Sbjct: 62  IEHVKYARNFTDVDDKINATAASRKAAGAKGTLEELIQERTDETIAWYLDDMRSLGNIDP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
              PRAT  I QMI +   +I  GHAY A   ++F   S  NYG+ S R +D+   G RV
Sbjct: 122 DFAPRATEFIDQMIEMNSELIGKGHAYAAEGHVLFAVDSYKNYGALSGRSVDDMIAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               +K+NP DF+LWK S    PGWESPWGRGRPGWHIECSAM+    G+ FDIHGGGLD
Sbjct: 182 EVAPYKRNPMDFVLWKPSDAETPGWESPWGRGRPGWHIECSAMARELFGERFDIHGGGLD 241

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS      E  A +W+HN  L +EG+KMSKS GNF ++ ELL+      
Sbjct: 242 LAFPHHENELAQSKACCGDESFAQVWMHNEMLQVEGKKMSKSLGNFFSVRELLD------ 295

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---VLSALY 356
           + +   V R   L THYR+P+D+T ++  EAE  L KW   S        A   V++AL 
Sbjct: 296 QGYSGEVARFVYLSTHYRKPMDWTDKKAREAEATLRKWRALSAGIEPASRAGASVVAALA 355

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEK 411
           +DLNT  AI  LHKLA              ASA +LG+         + +  ++S    K
Sbjct: 356 DDLNTPGAIAELHKLASSG-----KAAELKASALLLGLLQDDMGDWADVVAVDLSAFEAK 410

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           L   R   +  K F+  D ++K     G  +   K  
Sbjct: 411 LSDVRDAAMVSKDFAEVDRLKKAFTDAGLEVRMSKQG 447


>gi|123968849|ref|YP_001009707.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|187629849|sp|A2BS39|SYC_PROMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123198959|gb|ABM70600.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 489

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 182/510 (35%), Positives = 254/510 (49%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +K+  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKKVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E        ++  ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEES------SSMKEVSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + + EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNLQEQNINQQGRMVNE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+++      
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
                 +R  ++  +YR+P+DFT + L  A           +   +   A +        
Sbjct: 286 GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINVALSFMDLTKGAFISIDKNESI 345

Query: 353 --------------------SALYNDLNTVSAIQALHKLAR-----------------ES 375
                                AL NDLNT  AI  ++ LA+                 E 
Sbjct: 346 EEKYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFTVEL 405

Query: 376 TKNHDLLPIFN---ASAHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSAD 429
            +   LL  F        +LG++  KE L K        I  L+ ERL     K ++ AD
Sbjct: 406 NEKFFLLENFKTLEKLTEVLGLK--KEVLVKESKIKEEEISSLINERLKAKMEKNYAKAD 463

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  L+ KG  L D       + +T W +
Sbjct: 464 EIRNLLKEKGIELID-----QSKEITTWIR 488


>gi|170751939|ref|YP_001758199.1| cysteinyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170658461|gb|ACB27516.1| cysteinyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 465

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 205/482 (42%), Positives = 282/482 (58%), Gaps = 46/482 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL      F  IDP ++R+Y CGPTVYD AHIGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MAPMLRLYNTLTGAKEAFAPIDPQHVRVYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG + VTY RN+TD+DDKI  RA +         +I  +T     QF +D   L  L P 
Sbjct: 61  YGPEHVTYARNVTDVDDKINARAAER------GVSIRELTDGTLAQFHRDVRDLGVLMPE 114

Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
                       +PRAT+HI +M+ +I+ ++  GHAY A + ++FD  S+P+YG  S+R 
Sbjct: 115 DVNLTGARPRFVEPRATDHIVEMVTMIEALVRAGHAYVAADHVLFDVPSMPDYGGLSKRP 174

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
           +DE + G RV    +K++P DF+LWK + P EP W SP G    GRPGWHIECSAMS+ +
Sbjct: 175 LDEMEAGARVEVAPYKRSPLDFVLWKPAKPGEPSWPSPAGIAVAGRPGWHIECSAMSAKH 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIH GG+DLIFPHHENE+AQS C       AN+W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGRTFDIHAGGIDLIFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGEKMSKSLGNFI 294

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---S 343
           TI ++L         WP  V+RL ML T YR+PID+T++ L E+  +L +W   +    +
Sbjct: 295 TIRDVLND-------WPGEVVRLTMLKTQYRQPIDWTLRGLEESARVLDRWYNAAGDAPA 347

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------E 395
              I   V+ AL +DLNT +AI  LH+LA  +           A A++LG         E
Sbjct: 348 ASDIPVGVVEALCDDLNTPAAINELHRLAGGAEAQP---GALRAGANLLGFLARTRSDRE 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             +   +     A+E L+  R      K ++++D  R  L + G  ++D K+       T
Sbjct: 405 QDQVAASGVDVAAVEALIAARRAARAAKDWAASDRARDALAAMGVAVKDNKDGT-----T 459

Query: 456 RW 457
            W
Sbjct: 460 TW 461


>gi|317486410|ref|ZP_07945237.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316922320|gb|EFV43579.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 485

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 176/499 (35%), Positives = 247/499 (49%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNT+ RK   F  +    + +Y CG T Y  +HIG+AR  + FD+L RLLRY   E 
Sbjct: 1   MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII+RA  E        + + I     + + +D  RL  +    +PR
Sbjct: 60  -VTFVRNFTDVDDKIIKRANDE------GVSSTEIAETYIKAYHEDMDRLGVIRADIEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT HI +M+ L + +I  G AY   + ++ F   S P YG  S R  D+ + G RV    
Sbjct: 113 ATEHIQEMLNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  Y+    DIHGGGLDLIFP
Sbjct: 173 EKEDPLDFALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A   +  ANIW+HNGF+ ++  KMSKS GNF TI ++LE       S+ 
Sbjct: 233 HHENEIAQTEAALG-KPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILE-------SYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
           A  +R  +   HYR PIDF++  + E+E    +  +                        
Sbjct: 285 AETLRYFLAGKHYRSPIDFSLDNMDESERSQKRVYECLREVDKALARENWKPGAAPAELV 344

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASA 389
                 D + + AL +D+NT +A+  L  + R + +              D+L  F  + 
Sbjct: 345 EELKQQDQSFMDALEDDVNTAAAMGHLFNMVRIAGRVLEDKKLRNSEGGRDILRAFRDAT 404

Query: 390 H----ILGIEVCKEHLNKNISIAIEK------------LVQERLILLKMKKFSSADYIRK 433
                +LG+   K          I              L++ER      K F+ +D  R 
Sbjct: 405 AKWDTLLGLFAQKPEGFLASLREIRARRRGLDMNKVAGLLRERQEARAAKDFARSDAARD 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
           +L + G  + D        
Sbjct: 465 ELAALGVEVRDTPEGPVWD 483


>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|171769386|sp|A7HDA1|SYC_ANADF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 482

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 171/503 (33%), Positives = 246/503 (48%), Gaps = 66/503 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I I +TL     E Q I+P  IR Y CGPTVYD AH+G+ R  +V+D++ R LR    
Sbjct: 1   MPIVISDTLTGTKRELQPIEPGKIRFYACGPTVYDSAHVGHGRSYVVWDLVVRHLRARGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRN TD+DDKII RA          +    + ++  ++F +D   L  L P   
Sbjct: 61  E--VRYVRNFTDVDDKIIRRA------TERREDPVALAARYAREFDEDMDALGNLRPDVA 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+ + H+PQ++ +I +++  G AY A N ++ F   + P+YG  S+R +D+   G RV  
Sbjct: 113 PKVSEHVPQIVAMISSLVEKGFAYAAANGDVYFSVRAFPDYGRLSKRNLDDLLSGARVEP 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+  +LG   D+HGGG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPTWDSPWGGGRPGWHIECSAMTLAHLGVPIDLHGGGKDLV 232

Query: 242 FPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           FPHH NEIAQS  A       E     W+H+GF+ ++  KMSKS GNF T+ ++L     
Sbjct: 233 FPHHTNEIAQSAAAVGDGRTAESFCRHWMHHGFVEIDSEKMSKSLGNFFTLRDVLA---- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSK 344
               + A  +RL  L THYR PI+++   L EAE  L+ + +T             +   
Sbjct: 289 ---KFDAEGVRLFYLGTHYRNPINYSDAILAEAERRLNYFYETLEKVDALAEGTSPAGEG 345

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFNASAHI- 391
           G +      AL +D N    +  L +    +    D            L         I 
Sbjct: 346 GGVVEDARRALDDDFNAPQVLAVLAEAFTAANALADKRGKKTPEDRARLAAFARDVREIG 405

Query: 392 --LGIEVCKEHLNKN------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
             LG+   +                     ++E  + ER    + + F+ +D IR  L +
Sbjct: 406 TTLGLVQRRPAEALRAIRARAAARRGIDPASVEAKIVERAEARRARDFARSDAIRDALLA 465

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
           +G  L D      G + T WK +
Sbjct: 466 QGVALMD------GPQGTTWKVE 482


>gi|160943774|ref|ZP_02091005.1| hypothetical protein FAEPRAM212_01272 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444948|gb|EDP21951.1| hypothetical protein FAEPRAM212_01272 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104011|emb|CBL01555.1| cysteinyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
          Length = 465

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 179/479 (37%), Positives = 256/479 (53%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y     
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E        ++  +  +   +++KD   L C  PT QPR
Sbjct: 59  KVIYVSNITDIDDKLIKKGQEE------GTSMKEVAQRFEAEYLKDAAGLNCEKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--- 180
           AT HIPQ++ +++++I  GHAY A N ++ F   S P YG  S   +D+ + G R     
Sbjct: 113 ATEHIPQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPGYGKLSHLNLDDLESGNRELRSR 172

Query: 181 -EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A  W+HNGF+N++ +KMSKS  NF T+ ++        
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDV-------A 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------QT 340
             +    IR  ML   YR P+++TV  +   +  L +                       
Sbjct: 285 NLYGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTDFGTDETL 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHI 391
                       +A+ +DLNT  A+ A+  L +E                   F+    +
Sbjct: 345 KEKAAEARTKFCTAMDDDLNTPDALAAVFDLVKEINTLSAASSKAALETAAAAFDEITGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D      
Sbjct: 405 LGLLYNRKK--DEVPAEVTELVEKRAAAKKAKDWATADAIRAQLTELGWAVKDTAQGPQ 461


>gi|330814242|ref|YP_004358481.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487337|gb|AEA81742.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 430

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 205/444 (46%), Positives = 268/444 (60%), Gaps = 28/444 (6%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           +N+R+YVCGPTVYD+ H+GNARP+IVFD+L+RLL   +G++ V YVRNITD+DDKI+E A
Sbjct: 4   NNVRVYVCGPTVYDYPHVGNARPLIVFDLLFRLLNKIFGKEKVQYVRNITDVDDKILESA 63

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           + +      N +I  +T +  + F  D + L CL PT +P+AT+HI +MI L   +I   
Sbjct: 64  KSK------NISIQDLTKEVIKDFQDDCSYLNCLTPTKEPKATDHIQEMIELTTKLIEKK 117

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
            AY     + F+ S   +YGS S +KIDE   G+RV     KK+P DF+LWK S   EPG
Sbjct: 118 FAYIEKGHVYFEVSKYKDYGSLSNKKIDELISGSRVEISKSKKSPVDFVLWKPSLEDEPG 177

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W+SPWG+GRPGWH+ECSAMS  YLGK FDIHGGGLDLIFPHHENEIAQS CA+     A 
Sbjct: 178 WDSPWGKGRPGWHLECSAMSEKYLGKEFDIHGGGLDLIFPHHENEIAQSTCANETNLLAK 237

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNG++ +   KMSKS+GNFITINEL          +   VIRLAML THY +P D+ 
Sbjct: 238 FWMHNGYVTVNKEKMSKSDGNFITINEL-------KGKFDGQVIRLAMLSTHYTQPFDWN 290

Query: 324 VQRLTEAEILLSKWPQ-TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES----TKN 378
            Q L  +   L+KW    S     IDP++L +L +DLNT   I  LHKL +E+    TK+
Sbjct: 291 NQILENSYKSLNKWYDFYSDENETIDPSLLDSLKDDLNTPLFISQLHKLHQEAMDGNTKS 350

Query: 379 HDLLPIFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
              L        +  +        K+        +  L+QER +    K F  +D IR  
Sbjct: 351 GKKLSTACKFIGLFNVNAEGWKDQKSKKSLSEDEVNILIQERNLARDNKDFKRSDEIRDL 410

Query: 435 LESKGFILEDYKNPDNGQRMTRWK 458
           L  KG ++ED +N       T WK
Sbjct: 411 LNDKGILIEDKENS------TTWK 428


>gi|302552341|ref|ZP_07304683.1| cysteinyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302469959|gb|EFL33052.1| cysteinyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 477

 Score =  511 bits (1316), Expect = e-142,   Method: Composition-based stats.
 Identities = 167/486 (34%), Positives = 250/486 (51%), Gaps = 54/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD+L R   Y   + 
Sbjct: 16  IRLYDTSARQIRDFTPLQPGCVSIYLCGATVQAAPHIGHIRSGLNFDILRRWFAYRGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKII ++  +      N     I  +N + F      L CL PT++PR
Sbjct: 75  -VTFVRNVTDIDDKIIAKSADQ------NRPWWAIGYENERAFNDGYDALGCLPPTYEPR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +++ +I  GHAY A+  + FD  S P Y + S + ID+ +          
Sbjct: 128 ATGHITEMIEMMRGLIERGHAYVADGSVYFDVRSFPEYLALSNQDIDDLRQ--PDEGVSG 185

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDL+FPH
Sbjct: 186 KRDPRDFAMWKATKPGEPDWETPWGRGRPGWHLECSAMAHKYLGTAFDIHGGGLDLVFPH 245

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W  
Sbjct: 246 HENEIAQAKAY--GDDFAQYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRWRP 296

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP------AVLSA 354
            V+R  +   HYR  I+++ + L EAE   ++      +     G+++P      A   A
Sbjct: 297 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGVVEPAPEVPLAFAEA 356

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN- 404
           + +DL    A+  +H   R+                L    A   +LG++   EH     
Sbjct: 357 MDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEHWAGES 416

Query: 405 ---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                    +   +  ++ +R      K + +AD IR QL   G ++ED        +  
Sbjct: 417 DRGDDLHGVVDTLVRMVLDQREAARARKDWPTADAIRDQLSQSGLVIEDS------PQGP 470

Query: 456 RWKQKP 461
           RW   P
Sbjct: 471 RWSLGP 476


>gi|71083835|ref|YP_266555.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|109894918|sp|Q4FLI7|SYC_PELUB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|71062948|gb|AAZ21951.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 453

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 189/472 (40%), Positives = 276/472 (58%), Gaps = 31/472 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K I + N L  K  +F  I+  NI MYVCGPTVYD  HIGNARP+++FD+L+++L+  
Sbjct: 1   MNKDIFLTNNLNNKKEKFVPINKENIGMYVCGPTVYDNPHIGNARPLVIFDILFKVLKSK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           YG   + Y+RNITD+DDKII+ A+++      N +IS +T+   + F  D   L    P+
Sbjct: 61  YGHDKINYIRNITDVDDKIIKSAKEK------NLSISELTNNVIKDFNDDCNYLNLDNPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            QP+AT+HI  MI +I  +I    AY  N+ + F+ S   +YG  S +K+++   G+RV 
Sbjct: 115 QQPKATDHIDLMIKMISTLIEKDFAYVVNDHVYFEVSKFDDYGKLSNKKLEDLIAGSRVE 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +KK   DF+LWK S   EP W+SPWG+GRPGWH+ECSAMS  YLG VFDIHGGG+DL
Sbjct: 175 VSDNKKKSEDFVLWKPSKDDEPSWDSPWGKGRPGWHLECSAMSKKYLGNVFDIHGGGIDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS CA+  +  AN WIHN F+ +   KM+KS GN + I +  +       
Sbjct: 235 IFPHHENEIAQSRCANDSKVFANYWIHNAFITMSNEKMAKSTGNILKIKDFKDNV----- 289

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYN 357
                V++LA++  HY++P+D+  + L + +  + KW +       K ++D  +LS LY+
Sbjct: 290 --DGQVLKLALMSAHYKQPLDWNEKLLEDCKNTIDKWYEVYLPPKDKIVLDEDILSPLYD 347

Query: 358 DLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEV--------CKEHLNKNISIA 408
           DLNT   I  LH+L  ++ K  ++   +F  + + +GI           K+  +      
Sbjct: 348 DLNTPGYIAKLHQLYDKALKGGNEEKSLFVLACNFIGILNKTKEEWIEFKKKKSSINEDD 407

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           I +++  R    + K +  AD IR +L  KG ++ED K+       T WK K
Sbjct: 408 ILEMISLRNKAREDKNYKEADIIRNKLLDKGVLIED-KDGK-----TIWKLK 453


>gi|332530126|ref|ZP_08406075.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040396|gb|EGI76773.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 475

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 180/493 (36%), Positives = 255/493 (51%), Gaps = 58/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R +  F +++P ++RMYVCG TVYD  H+G+AR M+ FDV+ R L+    
Sbjct: 1   MTLRIYNTLSRALEPFVSLEPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKASG- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII+RA      +   + I  +T +      +D   L    PTH+
Sbjct: 60  -WRVTYVRNITDIDDKIIQRA------LKNGETIRGLTDRMIAALHQDADALGIQRPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRA +++PQM+ LI  +   G AY        A+ ++ +     P YG  S + +DE + 
Sbjct: 113 PRAMDYVPQMLDLIGQLERQGLAYRVPGQAGGASGDVNYSVRKFPGYGKLSGKSLDELRA 172

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           G RV     K++P DF+LWK +   EP    W+SP+G GRPGWHIECSAMS   LG+ FD
Sbjct: 173 GERVAVLDGKQDPLDFVLWKSAKADEPAEAQWQSPYGAGRPGWHIECSAMSCALLGESFD 232

Query: 233 IHGGGLDLIFPHHENEIAQSC-----CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           IHGGG DL FPHHENEIAQS       A+  +  A  W+HNGF+ ++  KMSKS GNF T
Sbjct: 233 IHGGGADLQFPHHENEIAQSEGAKIGAANEGQPMARYWMHNGFVRVDNEKMSKSLGNFFT 292

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           I E+L       + + A  +R  +L  HYR P+++    L +A   L +      +    
Sbjct: 293 IREVL-------QKYDAQTVRFFILRAHYRSPLNYGDAHLDDARSALKRLYTALQATPPA 345

Query: 348 DPA-------------VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHIL 392
             A               +A+  D  T  A+  L  LA E  K     L  +  A    L
Sbjct: 346 PMAPQTVDWTEGHAARFKAAMDEDFGTPEAVAVLFDLATEVNKTGSARLAALLKALGGCL 405

Query: 393 GIE------VCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           G+         +   +  +   AI+ L+ +R      K F+ AD IR++L ++G +L+D 
Sbjct: 406 GLLQEDPVAFLQSGASAALDASAIDSLIAQRAAAKAAKNFAEADRIRQELLAQGIVLKD- 464

Query: 446 KNPDNGQRMTRWK 458
                    T W+
Sbjct: 465 -----APTGTTWE 472


>gi|126696668|ref|YP_001091554.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|187629842|sp|A3PDX8|SYC_PROM0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126543711|gb|ABO17953.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 489

 Score =  510 bits (1315), Expect = e-142,   Method: Composition-based stats.
 Identities = 190/510 (37%), Positives = 261/510 (51%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL ++I  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRIEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E        ++  ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEES------ISMKEVSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +  LI  +   G+AY  + ++ +      NYG  S + I+EQ +  +      
Sbjct: 113 ATNHICNICDLITILEDKGYAYSRDGDVYYSVFKNQNYGKLSNQNIEEQNINQQGRMANE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+ +      
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELINS------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDP---- 349
                 +R  ++  +YR+P+DFT + L  A        + LS    T  S   ID     
Sbjct: 286 GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINVALSFMDLTKGSLNSIDKNEPI 345

Query: 350 -----------------AVLSALYNDLNTVSAIQALHKLAR-----------------ES 375
                                AL NDLNT SAI  ++ LA+                 + 
Sbjct: 346 EEEYKEKISFELSQKKLKFSEALGNDLNTASAIAIIYDLAKPLKNFLNQFQRVEGFKIDQ 405

Query: 376 TKNHDLLPIFN---ASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSAD 429
            +   LL  F        +LG++  KE L   +K     I  L+ ERL   K K ++ AD
Sbjct: 406 NEKFFLLENFKTLEKLTEVLGLK--KEVLVKESKITEEEISTLINERLKAKKEKNYAKAD 463

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  L+ KG  L D       + +T W +
Sbjct: 464 EIRSLLKEKGIELID-----QSKEITTWIR 488


>gi|326562651|gb|EGE12953.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 483

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 167/458 (36%), Positives = 238/458 (51%), Gaps = 52/458 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++Y+TL      F+ I    I +YVCG TVYD+ H+G+AR M+ FDV+ R LR   
Sbjct: 8   QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRNITDIDDKII+RA          + I+ +T +      +D   L C +P  
Sbjct: 68  YQ--VNYVRNITDIDDKIIQRA------YDNGETITELTDRFITAMHQDEQFLGCQSPNI 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           +PRAT HI  M +LI  ++    AY+ +  ++ +     PNYG  S+R +D+ + G   R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+  LG+ FDIHGGG 
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+H GF+N++G KMSKS GNF TI E+++     
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVD----- 293

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------K 344
              +    IR  +L +HYR P++F+   L E+   LS+  Q+  S              +
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGI- 394
                A   A+ +D NT  A+  L  +  E  +                    A +L I 
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411

Query: 395 -----EVCKEHL----NKNISIAIEKLVQERLILLKMK 423
                E  + ++    +      I   + +R      K
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKSSK 449


>gi|149926799|ref|ZP_01915058.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824351|gb|EDM83569.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 441

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 169/461 (36%), Positives = 233/461 (50%), Gaps = 50/461 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYDF H+G+AR M+VFD+L R LR       VTYVRNITDIDDKII RA    
Sbjct: 1   MYVCGMTVYDFCHLGHARVMVVFDLLKRWLRASGY--PVTYVRNITDIDDKIIRRA---- 54

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   ++I  +T +      +D   L    P H+PRAT ++ +M  +IQ ++    AY 
Sbjct: 55  --VENGESIRSLTDRFIAAMHEDADALGIERPDHEPRATEYVAEMQDMIQTLMNKRLAYR 112

Query: 148 AN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG--- 203
            +  ++ F   + P YG  S + +DE + G RV     K +P DF+LWK +   EP    
Sbjct: 113 DDSGDVNFAVRAFPEYGRLSGKSLDELRAGERVGVSGSKNDPLDFVLWKSAKADEPADAK 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W+S +G GRPGWHIECSAMS   LG  FDIHGGG DL FPHHENEIAQS  A   E  A 
Sbjct: 173 WDSDFGVGRPGWHIECSAMSCKLLGNTFDIHGGGADLQFPHHENEIAQSVGATG-EGFAQ 231

Query: 264 IWIHNGFLNLE----GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
            W+HNGF+ +E      KMSKS  NF TI ++L       + + A V+R  +L   YR  
Sbjct: 232 YWMHNGFVRVETNGQSEKMSKSLNNFFTIRDIL-------KVYDAEVVRFFILRAQYRSQ 284

Query: 320 IDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSALYNDLNTVSAIQALHK 370
           + ++   + +A+  L +                    +     A+ +D+NT  A+  L +
Sbjct: 285 LTYSEAHVQDAKAALGRLYTAVGDVQVAQSIDWTQEFEARFAEAMNDDMNTPIAVSVLFE 344

Query: 371 LARESTKNHD--LLPIFNASAHILGIEV----------CKEHLNKNISIAIEKLVQERLI 418
           +A E  +  D  L     A A +LG+              +         I+ L+  R  
Sbjct: 345 MANEVNRTADQTLAARLKALAQVLGLLGRTAEAFQKAEVGDQAGALDEAEIQALIDARAQ 404

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               + FS AD IR+QL   G +LED +        T W++
Sbjct: 405 AKADRDFSKADAIRQQLLDMGVVLEDKRGGA-----TEWRR 440


>gi|282878389|ref|ZP_06287179.1| cysteine--tRNA ligase [Prevotella buccalis ATCC 35310]
 gi|281299491|gb|EFA91870.1| cysteine--tRNA ligase [Prevotella buccalis ATCC 35310]
          Length = 496

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 167/508 (32%), Positives = 244/508 (48%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFVYNTLTRKKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I    T ++   
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQLYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  + FD        +YG  S 
Sbjct: 113 MDALNVLRPSIEPHATGHIIEQEELVKQILANGYAYESNGSVYFDIEKYNKDHHYGILSG 172

Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  +    K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINNSRELDGVDEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVRYWMHNNMITINGKKMGKSLGNF 291

Query: 286 ITINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +    T     +++    IR  +L  HYR  +DF+ + L  +E  L +        
Sbjct: 292 ITLEQFFHGTHDRLTQAYSPMTIRFFILSAHYRSTVDFSNKALQASEKGLERLMNGINDL 351

Query: 345 GIIDPA-----------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
             I  A                    A+ +DL T + I  L +         D     NA
Sbjct: 352 ERIQAASTSDEATHQLVVTLRQKCHEAMNDDLQTPTVISNLFEACHAINSLLDHKGSINA 411

Query: 388 -------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
                        +  +LG++  K   N     A    ++ ++  R      K ++++D 
Sbjct: 412 EDLTELKAVMQLFAFDLLGLKSEKGSNNDAREAAYGKVVDMVLSLRAKAKAEKDWATSDQ 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR  L   GF ++D K+         WK
Sbjct: 472 IRDALAENGFEVKDTKD------GVTWK 493


>gi|229496784|ref|ZP_04390495.1| cysteinyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
 gi|229316330|gb|EEN82252.1| cysteinyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
          Length = 491

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 161/493 (32%), Positives = 236/493 (47%), Gaps = 42/493 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+    +YNTL RK  +F  +   ++ MYVCGPTVY  AH+G+ARP I FD+LYR L + 
Sbjct: 1   MEHPFYLYNTLSRKKEQFIPVAAPHVGMYVCGPTVYGDAHLGHARPAITFDILYRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +         +      ++      L  
Sbjct: 61  GYK--VRYVRNITDVGHLEADADDGEDKVAKKARLEQLEPMEVVQFYLTRYRHAMEALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I L++ I+  G+AYE+   + FD         YG  S R I++ 
Sbjct: 119 LPPSIEPMASGHIIEQIRLVEEILKAGYAYESKGSVYFDVEKFNREKGYGKLSGRNIEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+NP DF LWK + P     W SPW  G PGWH EC+AM   YLG +F
Sbjct: 179 LSNTRTLDGQDEKRNPLDFALWKCAKPEHLMHWPSPWSEGFPGWHCECTAMGRKYLGDLF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQ+  A   E     W+HN  + +EG+KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLVFPHHECEIAQAEAAMGHE-LVRYWMHNNMITIEGKKMGKSYGNFITLDEF 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------- 342
              +      ++    IR  +L  HYR  +DF+ + L  A   L +    +         
Sbjct: 298 FAGSHPKLTEAYSPMTIRFFILGAHYRGTVDFSNEALQAARKGLMRLLDANALLDKLTPG 357

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------------DLLPIF 385
                    I+ +   A+ +DLNT   I  L   A +  +              +L  +F
Sbjct: 358 ATSTFDPKEIEKSAQEAMNDDLNTPIVIATLFDAATKINRLRNGEESLTQDDLAELKRVF 417

Query: 386 N-ASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 ILG++  +E  +        A++ L++ R      K ++++D IR +L   GFI
Sbjct: 418 RLYLFDILGLQDERESSSSGAEAYKGAMDLLMEIRKTAKDNKDWATSDKIRDRLAELGFI 477

Query: 442 LEDYKNPDNGQRM 454
           ++D K        
Sbjct: 478 VKDTKQGAEWSLG 490


>gi|197103884|ref|YP_002129261.1| cysteinyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|229470556|sp|B4RE90|SYC_PHEZH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|196477304|gb|ACG76832.1| cysteinyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 470

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 178/486 (36%), Positives = 267/486 (54%), Gaps = 47/486 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+Y+T+ R   +F   DP  + MYVCGPTVY++AHIGN RP++VFD+L+R+LR  YG
Sbjct: 1   MTLKLYDTMTRAKRDFVPSDPERVTMYVCGPTVYNYAHIGNFRPVVVFDLLFRVLRALYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y  N+TD+DDKI  +A +E   I +      +  +    +  D   L  LAPT Q
Sbjct: 61  EDHVLYAANVTDVDDKINRKAAEEGVPIGV------VAERYLAAYNADARALGALAPTFQ 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T  +  ++ +I  ++ +G AY A   ++F T + P+YG  S R +++   G RV   
Sbjct: 115 PKVTETMDAIVGMIGRLVDNGAAYAAEGHVLFSTEAFPDYGKLSGRPLEDLIAGARVDVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK+P DF+LWK S P EP WESPWG GRPGWHIECSAM    LG   DIHGGG+DL+F
Sbjct: 175 PYKKDPRDFVLWKPSKPGEPEWESPWGPGRPGWHIECSAMIEEALGLPIDIHGGGIDLVF 234

Query: 243 PHHENEIAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           PHHENE+AQ  CA       +  A  W+HNGFLN+   KMSKS GN    ++LL      
Sbjct: 235 PHHENELAQGVCAAHPHGHGQTYARYWLHNGFLNMAEEKMSKSVGNVALAHDLL------ 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
            ++WP   +R A+L   YR+P+++T   + +A+  L +  +          + ++  +DP
Sbjct: 289 -KTWPGEALRWALLSGQYRQPLEWTDTLIEQAKSALDRLYRVLDDAARPGDAAAEPFVDP 347

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKN---HDLLPI------FNASAHILGIEV---- 396
            V +AL++DLNT +A+ AL +++ E        D   +         SA+++G       
Sbjct: 348 RVEAALHDDLNTPAAMAALFQISDELRSAIMRKDAAAVAEGRGRLVGSANLMGFLAQAPQ 407

Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
              +   ++++   +E L+ +R      K +  AD IR +L +    + D      G   
Sbjct: 408 AWFQSGADEDLKARVEDLLAQRQAARAAKDWPRADQIRAELAALNVEVMD------GPSG 461

Query: 455 TRWKQK 460
             W+ K
Sbjct: 462 ATWRIK 467


>gi|259419145|ref|ZP_05743062.1| cysteinyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259345367|gb|EEW57221.1| cysteinyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 457

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 204/457 (44%), Positives = 267/457 (58%), Gaps = 20/457 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++N+  RK   F  I+P N++MYVCGPTVYD AH+GNARP++VFDVL+RLLR+ YG +
Sbjct: 4   IKLHNSKTRKKEVFIPINPDNVQMYVCGPTVYDRAHLGNARPVVVFDVLFRLLRHVYGAE 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RN TD+DDKI  RA +          IS ITS+ TQ F+ D   L  L PTH PR
Sbjct: 64  HVTYARNFTDVDDKINARAAES------GREISEITSETTQWFLDDMGALGALEPTHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
           AT +IPQM+ +I+++I  GHAY A   ++F   S    YG  S R +D+   G RV    
Sbjct: 118 ATQYIPQMVAMIEDLIARGHAYAAEGHVLFAVDSWREGYGQLSGRSVDDMIAGARVEVAP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKNP DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSDAAQPGWDSPWGRGRPGWHIECSAMSLDLLGESFDIHGGGNDLMFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA+   + A  W+HN  L +EG+KMSKS GNF T+ +LLE      +  P
Sbjct: 238 HHENEIAQSCCANPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------QGIP 291

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYNDLN 360
             V+R   L T YR+P+D+T ++  EAE  L KW   +           AVL  L +DLN
Sbjct: 292 GEVVRFVFLQTLYRKPMDWTEKKAAEAEATLRKWRALTAGIEPAATAAAAVLDTLADDLN 351

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL--NKNISIAIEKLVQERLI 418
           T  AI  +HK    +  +   L        +L  E+       + ++S    +L   R  
Sbjct: 352 TAGAIAEMHK--LAAAGDAAGLLAAGQLVGLLSDEMGDWAAAPSVDLSAHEARLFAARQT 409

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
            ++ K F+  D ++      G  +   K        T
Sbjct: 410 AMETKDFAEVDRLKSAYTEAGLEVRMSKTGVELVPGT 446


>gi|241895151|ref|ZP_04782447.1| cysteinyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871647|gb|EER75398.1| cysteinyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 471

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 170/493 (34%), Positives = 244/493 (49%), Gaps = 60/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT+      F  I    I MYVCGPTVY++ HIGNAR  I FD + R   Y     
Sbjct: 2   IKMFNTMTLAKEPFHPIHDDTINMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+ A ++         +  +  K    F +DT  L     T +PR
Sbjct: 60  TVNYVSNFTDVDDKMIKAAAEQ------GITVPELADKYIAAFNEDTAALNIKPATVRPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT HI Q+I  + ++I  G+AYE+  ++ +      NYG+ + + + E            
Sbjct: 114 ATEHIAQIIDFVADLIDKGYAYESAGDVYYRAKKFHNYGALAHQDLAEMTSNAAGRLNDE 173

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK  +      WESPWG+GRPGWHIECS MS+ YLG  FDIHGGG+D
Sbjct: 174 ELERKEDPMDFAVWKGENGDGAIAWESPWGKGRPGWHIECSVMSTKYLGNHFDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHH NEIAQS      EK  N W+HNGF+ +  E  KMSKS GNF+T+++LL+    
Sbjct: 234 LAFPHHTNEIAQSEVHTG-EKFVNEWLHNGFVTVGDENEKMSKSLGNFVTVHDLLQQID- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------QTSTSKG 345
                   V+R  M  T YR  I ++   +T+A   L +                +  + 
Sbjct: 292 -----DPMVLRFFMATTQYRRSIAYSESNMTQAAHNLDRIRTGYRNLAFRLTDAVAGDES 346

Query: 346 IIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
           +ID           +A+ +D N  +A+ A+++L   + +              +L     
Sbjct: 347 LIDDKASELVVQFNTAMDDDFNAPNALTAIYELVDLANQYAATEVVYQDTVNFILDKITV 406

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I G++      ++ +   IE L+QER      K F+ +D IR  L  +G ILED   
Sbjct: 407 LMSIFGVDGL--SDDELLDDDIEALIQERNDARTNKNFARSDEIRDSLAEQGIILEDT-- 462

Query: 448 PDNGQRMTRWKQK 460
                + TRW +K
Sbjct: 463 ----PQGTRWHRK 471


>gi|91070003|gb|ABE10929.1| cysteinyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           ASNC3046]
          Length = 489

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 180/508 (35%), Positives = 253/508 (49%), Gaps = 78/508 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +K+  F+ ID   +++Y CG TVYD  H+G+AR  I +D+L R L   Y + 
Sbjct: 2   IKLFNTLSKKVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDILRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E        ++  ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEES------SSMKEVSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + + EQ +  +      
Sbjct: 113 ATNHICNICSFITVLEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNLQEQNINQQGRMVNE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+++      
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
                 +R  ++  +YR+P+DFT + L  A           +   +   A          
Sbjct: 286 GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKDAFKSIDKNESI 345

Query: 353 --------------------SALYNDLNTVSAIQALHKLAR-----------------ES 375
                                AL NDLNT  AI  ++ LA+                 + 
Sbjct: 346 EVEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVECFKIDL 405

Query: 376 TKNHDLLPIFN---ASAHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSAD 429
            +   L+  F        +LG++  KE L K        I  L+ ERL   K K ++ AD
Sbjct: 406 NEKFFLIENFKTLEKLTEVLGLK--KEVLVKESKIKDDEISSLIDERLKAKKEKNYAKAD 463

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRW 457
            IR  L+ KG  L D       + +T W
Sbjct: 464 EIRNFLKEKGIELID-----QSKEITTW 486


>gi|72382588|ref|YP_291943.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|109894920|sp|Q46JT8|SYC_PROMT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|72002438|gb|AAZ58240.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 500

 Score =  510 bits (1313), Expect = e-142,   Method: Composition-based stats.
 Identities = 179/517 (34%), Positives = 252/517 (48%), Gaps = 80/517 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K  NTL +K  +F +I+P+ +++Y CG TVYD  H+G+AR  + +DVL R L +   
Sbjct: 1   MSLKFTNTLSKKKEDFISINPNQVKIYCCGVTVYDLCHLGHARSYLNWDVLRRFLIWKGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +V+N TDIDDKII RA +E        +   ++ +N  +F KD   L+ L PT  
Sbjct: 61  E--VKFVQNFTDIDDKIINRANKE------GCSTDELSERNIDEFHKDMDTLSILRPTSM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
           PRAT  + Q+I  I+ +     AY +N ++ F      NYG  S R+I++Q        +
Sbjct: 113 PRATKCLHQIINFIEELEQKKVAYSSNGDVYFSVDKHKNYGKLSGREIEDQIDNAAGRLK 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +K  KKN  DF LWK+S   E  + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 TNQKESKKNSLDFALWKKSNSGEVSYSSPWGNGRPGWHIECSAMVKQELGESIDIHLGGS 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS   +  E  A  W+HNG +N+ G KMSKS GNF TI  LLE     
Sbjct: 233 DLIFPHHENEIAQSEACNGKE-LAKYWLHNGMVNVGGEKMSKSLGNFTTIRSLLE----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQTSTSKGI 346
                   +R  +L T+YR+P+DFT + L  A     +                S ++  
Sbjct: 287 -EDISPMTLRFFVLQTNYRKPLDFTEEALKAASKGWERLNNCLSFGYIYKIKDQSKNEIF 345

Query: 347 IDP-------------------AVLSALYNDLNTVSAIQALHKLAR-------------- 373
           +D                         + +DLNT  A+  L +L++              
Sbjct: 346 LDKPIKKSANTKLDKNSFKLLSDFEKYMDDDLNTSGALSILFELSQPIRKIINFLKEKDI 405

Query: 374 ------ESTKNHDLLPIFNASAHILGIEV----CKEHLNKNISI-AIEKLVQERLILLKM 422
                 E  +  +   + +  A +LG++V     K   N  +    IE+L++ R +    
Sbjct: 406 NEVDQDELNQVFNKWELLSELAGVLGLKVNLNQEKPKNNPELDTNKIEELIKNRSLAKAN 465

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           K F  AD IR  L++ G  L D         +T WKQ
Sbjct: 466 KDFLLADKIRADLKNIGIDLIDKPKG-----VTEWKQ 497


>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109894880|sp|Q2IQG7|SYC_ANADE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 481

 Score =  509 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 176/502 (35%), Positives = 253/502 (50%), Gaps = 65/502 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++TL  +  E   ++P  +R+YVCGPTVYD++H+G+AR  +V+DV+ R LR    
Sbjct: 1   MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN TD+DDKII+RA +        +    + S+    F +D   L  L P  +
Sbjct: 61  E--VRFVRNFTDVDDKIIQRANER------GEDPIALASRFADAFHEDMDALGNLRPDVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR + HIP+++ LI  ++  G AY   N ++ +     P YG  S+R +D+   G RV  
Sbjct: 113 PRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEP 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+  +LG   D+H GG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLV 232

Query: 242 FPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           FPHH NEIAQS  A       E  A  W+HNGF+ ++  KMSKS GNF TI ++L     
Sbjct: 233 FPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLAR--- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DP 349
               +    +R  +L THYR   +F+ Q L EAE  LS   +T      +        +P
Sbjct: 290 ----FDGEALRFFLLGTHYRRDFNFSDQVLAEAERRLSALYETVEKAERLGAGVEPGAEP 345

Query: 350 AVLS----ALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF----NASAH 390
           A +     AL +D NT   +  + +   E+    D            L  F     A   
Sbjct: 346 AFVERARAALDDDFNTPQVLGIVAEAFTEANALADRKGKKSPEEKARLAAFARGARAVGA 405

Query: 391 ILGIE------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +LGI                          +E+L+ ER      K F+ +D IR  L ++
Sbjct: 406 VLGILGRPPAQALSAIRDRAAARRGIDGSEVERLIAERAAARAAKDFARSDAIRDGLLAR 465

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G +L D      G + T WK +
Sbjct: 466 GVVLMD------GPQGTTWKVE 481


>gi|29830510|ref|NP_825144.1| cysteinyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|61216621|sp|Q82GD0|SYC_STRAW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29607622|dbj|BAC71679.1| putative cysteinyl-tRNA synthetase [Streptomyces avermitilis
           MA-4680]
          Length = 466

 Score =  509 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 161/484 (33%), Positives = 245/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFTPLLPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++               I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKSADH------GRPWWAIGYENERAFNDGYDVLGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M+ +++ +I  GHAYEA+  + FD  S P Y   S +++D   +      +
Sbjct: 113 PRATGHITEMVEMMRTLIERGHAYEADGNVYFDVRSFPEYLQLSNQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPTWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDEFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KQW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++                     + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGVVEPSPEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQALAIVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++ +R      K +++AD IR QL   G ++ED        
Sbjct: 403 GEGDRGEDLHGVVDTLVRMVLDQREAARARKDWATADAIRDQLNQSGLVIEDSPQGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|239816065|ref|YP_002944975.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511846|sp|C5CPX0|SYC_VARPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239802642|gb|ACS19709.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 459

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 181/477 (37%), Positives = 243/477 (50%), Gaps = 44/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R++ EF  + P  +RMYVCG TVYD  H+G+AR MI FD++ R L+    
Sbjct: 1   MSLRIYNTLSRELEEFSPLQPGRVRMYVCGMTVYDLCHLGHARSMIAFDLVQRWLKASGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    PTH+
Sbjct: 61  --AVTYVRNITDIDDKIIRRA------VENGETIRSLTDRMIDALHEDADALGIERPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT++IPQM+ +I  +   G AY A N ++ +     P YG  S + IDE   G RV  
Sbjct: 113 PRATDYIPQMLSMIGTLEKKGLAYRAENGDVNYAVRKFPGYGKLSGKSIDELHAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P D +LWK + P EP    W S +G GRPGWHIECSAM+   LG+  DIHGGG 
Sbjct: 173 LDGKDDPLDPVLWKSAKPSEPEEVKWASEFGPGRPGWHIECSAMACELLGETLDIHGGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  AN W+HNGF+  +  KMSKS GNF  I ++L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLANYWMHNGFIVTDNEKMSKSLGNFFLIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDP- 349
            + + A  IR  ++  HYR P++++   L +A   L +         PQ   +    DP 
Sbjct: 286 -KKYDAETIRFFVVRAHYRRPLNYSDVHLDDARASLKRLYTSLDLVAPQALAAIDWNDPY 344

Query: 350 --AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI--EVCKEHLNK 403
                +A+  D  T  A+  L  LA E  +        +  A    L I  +  K  L  
Sbjct: 345 AARFKAAMDEDFATPEAVAVLFDLAGEVNRTQSPAQAGLLKALGGCLNILQDDPKRFLRA 404

Query: 404 N---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                   I+  +  R      K F+ AD IR  L ++G +L+D          T W
Sbjct: 405 GTTLDEATIQAQIDARAAAKAAKNFAEADRIRNDLLAQGIVLKDSPT------GTTW 455


>gi|120610992|ref|YP_970670.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|187629785|sp|A1TPK8|SYC_ACIAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|120589456|gb|ABM32896.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 459

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 178/478 (37%), Positives = 248/478 (51%), Gaps = 44/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + +F  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRAMEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +     I  +T + T    +D   LA   PT +
Sbjct: 61  --RVTYVRNITDIDDKIIRRA------VERGITIRQLTDEMTAAMHEDIGALAIEPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ LI  +   G AY A   ++ +       YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLSLIGTLERKGLAYRAGSGDVNYAVRRFEGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 173 QDDKQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI E+L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPA--- 350
            +   A  +R  ++ THYR P++++   L +A   L +             G ID A   
Sbjct: 286 -QQVDAETLRFFIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGAIDWADPH 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
                +A+  D  T  A+  L +LA E  +           A    + + +      +  
Sbjct: 345 AARFKAAMDEDFGTPEAVAVLFELAGEVNRTRSARLAGLLKALGGCLGLLQGDPQAFLRQ 404

Query: 408 AIE-------KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            ++         +  R      + F+ AD IR  L ++G +L+D          T W+
Sbjct: 405 GVQLDAAEIAARIAARAAAKAARDFAEADRIRNDLLAQGIVLKDS------PAGTTWE 456


>gi|282860520|ref|ZP_06269586.1| cysteinyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282564256|gb|EFB69792.1| cysteinyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 465

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 161/482 (33%), Positives = 250/482 (51%), Gaps = 50/482 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII+++ ++      N     I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIKKSAEQ------NRPWWSIGYENERAFNDGYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M+ +++ +I  GHAYEA+  + FD  S   Y   S + +D+ +  +    +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSYEGYLELSNQDLDDLRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HNG++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++                     + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEMAGGEVAPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDAHWV 402

Query: 399 -----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                E L+  +   +  ++ +R      K + +AD IR +L   G ++ED      G R
Sbjct: 403 SETEGEDLHGVVDTLVRLVLDQRQAARDRKDWPAADAIRDRLSQAGLVIEDS---SGGPR 459

Query: 454 MT 455
            T
Sbjct: 460 WT 461


>gi|307706127|ref|ZP_07642946.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307618527|gb|EFN97675.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 423

 Score =  509 bits (1311), Expect = e-142,   Method: Composition-based stats.
 Identities = 161/445 (36%), Positives = 231/445 (51%), Gaps = 39/445 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ H+GNAR  + FD + R   Y   E  V Y+ N TD+DDKII RA++E 
Sbjct: 1   MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE--VAYISNFTDVDDKIINRAKEE- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                      +  K    F +D T L     T  PR    +  +I  ++++I  G AYE
Sbjct: 58  -----GITPQEVADKYIAAFREDVTALGVKPATRHPRVVEFMADIIRFVEDLIGKGFAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPEKYHKKNPADFILWKRSTPMEPGW 204
           +  ++ F      NY   + + +++ ++G       E   K+NP DF LWK +   E  W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEETARKENPVDFALWKAAKSGEISW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           +SPWG GRPGWHIECS MS+  LG   DIHGGG DL FPHH NEIAQS      +  AN 
Sbjct: 173 DSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANY 231

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+HNGF+N++  KMSKS GNFIT+++ L+T           V+R      HYR+PI+FT 
Sbjct: 232 WMHNGFVNIDNVKMSKSLGNFITVHDALKT-------LDGQVLRFFFATQHYRKPINFTE 284

Query: 325 QRLTEAEILLSKWPQTSTSK--GIIDPA--------VLSALYNDLNTVSAIQALHKLARE 374
           + + +AE  L     T      G +D           ++A+  D N  + I  + ++A+ 
Sbjct: 285 KAVRDAETNLKYLKNTYEQPFTGTVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAKW 344

Query: 375 STK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                 +  +         + GI   +E L+    + IE L+Q+R      + F++AD+I
Sbjct: 345 INSGNYDASVKEALADMLEVFGIVFVEEVLD----VEIEDLIQKRQEARANRDFTTADHI 400

Query: 432 RKQLESKGFILEDYKNPDNGQRMTR 456
           R QL ++G  L D K+   G R TR
Sbjct: 401 RDQLAAQGIKLLDTKD---GVRWTR 422


>gi|327400878|ref|YP_004341717.1| cysteinyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327316386|gb|AEA47002.1| cysteinyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 471

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 248/495 (50%), Gaps = 67/495 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL ++  E +      +R+YVCG T YD++HIG+AR  ++FD   R L +   E 
Sbjct: 1   MRLYNTLTKREEELK--LDKTVRIYVCGITAYDYSHIGHARSAVIFDTFRRYLEWKGHE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DDKI+ RA  E      N     +  K   ++ KD   L     T+ P+
Sbjct: 58  -VIYVQNFTDVDDKIVRRAVAE------NRTQKEVAEKFIAEYFKDMEALNVRKATYHPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            T HI  +I  +  +I  G+AYE      ++ F   S  +YG  S   ++E     R+  
Sbjct: 111 VTEHISDIIQAVSELIKKGYAYEVGGENKDVYFHVPSFSHYGELSGMSLEELNRH-RIEP 169

Query: 182 KYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              KK+  DF LWK +   +      ++SPWG GRPGWHIECS M++ YLG  FDIHGGG
Sbjct: 170 DERKKDVKDFALWKAAKEEDIKAKAVFDSPWGLGRPGWHIECSVMAAKYLGIPFDIHGGG 229

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENE AQS     IE     WIHN F+ ++G KMSKS GN + I ++L     
Sbjct: 230 KDLIFPHHENERAQSYALHGIEP-VRYWIHNDFVTIKGEKMSKSLGNIVKIRDVL----- 283

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
             + +   V+R  +L  HYR PID++ + +  AE   S    T                 
Sbjct: 284 --QKYNGEVLRYFLLSAHYRSPIDYSEESIERAEKAYSALRNTLELIDMEIAAFKTFGGG 341

Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLP 383
                 + +   +    +SA+ ND NT  AI +LH+ +  + K             +   
Sbjct: 342 EGAGELNDATSNLSANFISAMENDFNTPKAIASLHEFSTRTNKAVNKGLAGLEELENAFE 401

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            F +  ++LGI V  + +   +S  + +LV+ER    + K F  AD IR++L  +G++L 
Sbjct: 402 TFLSLCNVLGIFVDYQRV-PVLSSELAELVKEREEARREKNFEKADRIREKLRERGYVLI 460

Query: 444 DYKNPDNGQRMTRWK 458
           D        R TRWK
Sbjct: 461 DT------PRGTRWK 469


>gi|163755873|ref|ZP_02162990.1| cysteinyl-tRNA synthetase [Kordia algicida OT-1]
 gi|161324044|gb|EDP95376.1| cysteinyl-tRNA synthetase [Kordia algicida OT-1]
          Length = 494

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 157/491 (31%), Positives = 234/491 (47%), Gaps = 42/491 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++KIYN+L  +   F  I+  ++ MYVCGPTVY   H+GN R  + FD+++R L +  
Sbjct: 6   EQELKIYNSLTNQKEVFTPINEGHVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLNHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD+    +D      +    +         I  + T  F     +   +
Sbjct: 66  YK--VRYVRNITDVGHLENDAEEGEDKIAKKARLEELEPMEIVQRYTIDFHDILQKFNFI 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQK 174
            P+ +P AT HI + I +++ II +G+ YE N  + FD         YG  S R +D+  
Sbjct: 124 PPSIEPTATGHIIEQIEIVKEIIANGYGYEVNGSVYFDVHKFNEKNKYGILSNRNLDDLV 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             +R    +  KKNP DF LWK++       W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 184 NNSRELDGQSDKKNPQDFALWKKAEETHIMHWPSPWGEGFPGWHLECTAMSTKYLGQKFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE+EIAQ+          N W+H   L L G+KMSKS  N I   E+ 
Sbjct: 244 IHGGGMDLKFPHHESEIAQNEACCGTSP-VNYWMHANMLTLNGKKMSKSTDNNILPGEIF 302

Query: 293 ETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-- 349
             +     + +   V R  M+  HYR  +DF+   L  +E   +K  +  T+   + P  
Sbjct: 303 SGESTHLSKGFAPSVARFFMMQAHYRSILDFSNNALLASEKGYNKLMEAMTTLENLKPIG 362

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
                          +AL +D NT   I  L +  +   +  D      A          
Sbjct: 363 DKTSFNLSVWKRNCYNALNDDFNTPILIADLFEAVKFINQLKDGKATILAESLAELKKCM 422

Query: 388 ---SAHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                 ILG+E      +    +S  +E L+  R      K F+++D IR +L + G  L
Sbjct: 423 HAFVFEILGLEQPNASSDDGDALSGVVELLINMRTEARANKDFATSDKIRDELLALGIQL 482

Query: 443 EDYKNPDNGQR 453
           +D K+  +  R
Sbjct: 483 KDGKDGTSFSR 493


>gi|302336403|ref|YP_003801610.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320243|gb|ADK68730.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 493

 Score =  509 bits (1310), Expect = e-142,   Method: Composition-based stats.
 Identities = 170/512 (33%), Positives = 242/512 (47%), Gaps = 79/512 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+   +  E + ++  +IRMYVCGPTVYD  HIGNAR  + FDV+ R L Y   + 
Sbjct: 1   MLVYNSQTHRKEELRPLEEGHIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLTYKGYQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII RA  E        + + +  + +  F+    R   L P  +PR
Sbjct: 60  -VTFAQNLTDVDDKIINRANDE------GRSATEVAEEFSCAFIDQMRRFNILDPDIRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  +I+ +I  GHAY A N ++ F   S  +YGS S R +D+ + G RV    
Sbjct: 113 ATREVEAMRQMIETLIEKGHAYVAGNGDVYFSVRSDHDYGSLSGRDLDQLRAGERVEVNE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWH EC AM  HYLG   DIHGGG DL+FP
Sbjct: 173 DKRDPFDFALWKAAKPGEPSWPSPWGEGRPGWHTECCAMIHHYLGTPIDIHGGGQDLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA      ANIW+H G L + G KMSKS GNF+T+ ++L+        +P
Sbjct: 233 HHENECAQALCAWGA-PLANIWMHAGMLRVNGDKMSKSLGNFLTLEDVLDD-------YP 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------PQ 339
           A  +RL ML THYR  +DF   +L  A   L +                           
Sbjct: 285 AGAVRLLMLQTHYRSALDFQTDQLEGAVGTLERLRTCVKNLRWAAENAPQDGELCDADRS 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFN 386
              +        +  + +D NT   + A+  L   +                     +  
Sbjct: 345 LGAAVDATHAEFVRQMDDDFNTSGGLAAIFSLVTSANTYLAERAGVVATAPVLRAADMLV 404

Query: 387 ASAHILGIEVCKEHLNKNISIAI-------------------EKLVQERLILLKMKKFSS 427
             + ++GI++ +    + + I +                     L+  R      K +  
Sbjct: 405 ELSAVMGIDLVRGSGGEELPIELVDLARRHAGFEGHLADEAARALIDAREAARAAKDWGV 464

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           AD IR  +   G +LED          TR ++
Sbjct: 465 ADAIRDGIAGLGLVLEDT------PAGTRLRR 490


>gi|315186109|gb|EFU19871.1| cysteinyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 470

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 158/482 (32%), Positives = 233/482 (48%), Gaps = 38/482 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++NT+ R    F   +   + MY CGPTVY++AHIGN R  I  DVL R L +   
Sbjct: 1   MELRLFNTMGRIQEPFVPREAGKVGMYTCGPTVYNYAHIGNLRTYIFEDVLRRTLLHAGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
              + +V N+TD+     +    E   I        ++  I    T+ F +DT +L    
Sbjct: 61  --RLVHVMNVTDVGHLTSDGDEGEDKVIKAARERGMSVWEIAEFFTKAFFEDTDKLNIQR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P    +AT HIP+MI L++ +   GH Y A   + +D S+ P YG  +R    + + G R
Sbjct: 119 PEIVCKATEHIPEMIDLVKRLEERGHTYLAGGNVYYDISTFPRYGELARLDEQDLRAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V    HK++P DF+LW   +  E     W+SPWG+G PGWH+ECSAMS  YLG+ FDIH 
Sbjct: 179 VGVDAHKRSPRDFVLWFTRSKFEHQAMVWDSPWGKGYPGWHLECSAMSMKYLGEQFDIHC 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQS  A         W+H  FL ++  KMSKS GNF+T++ L E  
Sbjct: 239 GGVDHIPVHHTNEIAQSEGATGRHPWVRYWLHAEFLVMDSGKMSKSKGNFLTLSSLEE-- 296

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------------LSKWPQTST 342
                 +     R   L  HYR  + F+ + L  A                   W QT  
Sbjct: 297 ----EGFHPLDYRYFCLGAHYRSQLFFSWEALEAARNARRNLIEHLSGLHPREGWEQTPL 352

Query: 343 SK--GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHILGIEVCKE 399
           S+           A+ +DL+T  A+  L +  ++     +   +       ILG+ + + 
Sbjct: 353 SERGEAYKREFEEAIGDDLSTPRALAVLWRAVKDEDLPPEERAVLTVTMDRILGLSLAEA 412

Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +   + +LVQ R  L K + F+ AD IR +L  +G I+ED        +  RWK
Sbjct: 413 IASDDALEPELLELVQRREALRKQRDFAEADRIRDELARRGIIVEDT------PQGPRWK 466

Query: 459 QK 460
           +K
Sbjct: 467 RK 468


>gi|307326970|ref|ZP_07606160.1| cysteinyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
 gi|306887268|gb|EFN18264.1| cysteinyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
          Length = 465

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 161/483 (33%), Positives = 252/483 (52%), Gaps = 47/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   +   
Sbjct: 1   MTIRLYDTSARQIRDFTPLRPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAHRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++ ++            I  +N + F +    L CL  T++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKSAEQKRPWW------AIGYENERAFNQAYDILGCLPVTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P+MI +++ +I  GHAY A   + FD  S P Y   S + +D  +  +    +
Sbjct: 113 PRATGHVPEMIEMMRELIDRGHAYAAEGNVYFDVRSFPEYLKLSNQDLDGLRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DLIF
Sbjct: 172 IGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGRAFDIHGGGVDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDDFAAYWAHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVL 352
              V+R  +   HYR  I+++ + L EAE   ++             T      + PA  
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVMEKAGTVEPAAEVPPAFA 342

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL-- 401
            A+ +DL    A+  +H   R+                L    A   +LG++   EH   
Sbjct: 343 EAMDDDLGVPQALAVVHTTVRQGNSALTADDKEAAVARLAEVRAMLGVLGLDPLDEHWAG 402

Query: 402 ----NKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                +++   ++ LV    ++R      K +++AD IR QL+  G ++ED  +    + 
Sbjct: 403 GSDRGEDLHGVVDSLVRLVLEQRQAARTRKDYATADAIRDQLQQSGLVIEDTPSGPRWEM 462

Query: 454 MTR 456
             R
Sbjct: 463 GQR 465


>gi|221194861|ref|ZP_03567918.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
 gi|221185765|gb|EEE18155.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
          Length = 513

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 171/519 (32%), Positives = 239/519 (46%), Gaps = 91/519 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT   +   F  ID   +RMYVCGPTVYD  HIGNAR  + FDV+ R L +   E 
Sbjct: 1   MLVYNTQTHRKETFTPIDEGKVRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLMHAGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII RA ++            +  + +  F++   R   L P  +PR
Sbjct: 60  -VTFAQNLTDVDDKIINRALEQ------GRTAQEVAEEYSSAFIEQMHRFNILDPDIRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ I  M+ +IQ++I  G AY   + ++ F   +  NYG  S R +D+ + G RV    
Sbjct: 113 ATHEINAMVEMIQSLIDQGFAYAVPSGDVYFSVRADHNYGVLSGRDLDQLRAGERVEVNT 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W SPWG GRPGWH EC AM   YLG   DIHGGG DL+FP
Sbjct: 173 EKRDPFDFALWKTAKPGEPSWPSPWGEGRPGWHSECCAMIHRYLGTPIDIHGGGADLVFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ C    E  AN W+H G L +EG KMSKS GNF T+ E+L+       S+ 
Sbjct: 233 HHENETAQASCCWH-EPLANYWMHAGMLRVEGEKMSKSLGNFYTLKEVLD-------SYS 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------------- 338
           A  +RL ML THYR  +DF+ +RL  A   L +                           
Sbjct: 285 ADAVRLLMLQTHYRASLDFSFERLDGAIGTLERMKTCVANLRWAAKNAQSTERSADAGRS 344

Query: 339 -----------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD- 380
                            + +++ G        ++ +D NT  A+ A+  L   +      
Sbjct: 345 ANTGDATQDHKQSDRENELTSAIGTACENFERSMADDFNTAEALAAMFTLVTAANTYLAD 404

Query: 381 ------------LLPIFNASAHILGIEVCKEHLNKNISIAI------------------- 409
                                 +LGI V  +  +  +   +                   
Sbjct: 405 AADAINAKLTLHAADTLTELFGVLGISVNTDKASDELPHELIDLAKSQAGYEGESVTQAA 464

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           E L+  R      K +  AD IR  +   G ++ED  + 
Sbjct: 465 EALLSARQNARAEKNWVVADAIRDGIAGLGLLIEDTASG 503


>gi|298372255|ref|ZP_06982245.1| cysteine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275159|gb|EFI16710.1| cysteine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 488

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 162/489 (33%), Positives = 247/489 (50%), Gaps = 41/489 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ I+NTL R+   F+ ++   + +YVCGPTVY  AH+G+ARP I FD+L R LR+ 
Sbjct: 1   MQHKMYIHNTLSRRKELFEPLNEPFVGLYVCGPTVYGDAHLGHARPAITFDILVRWLRHN 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
                V YVRNITD+     D      +    +         +    T ++      L  
Sbjct: 61  GY--RVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLEPMEVVQHFTIRYHDAMRALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQ 173
           L P+ +PRA+ HI + +  +Q I+ +G+AYE+   + FD    +    YG  S R I++ 
Sbjct: 119 LPPSIEPRASGHIIEQMEYVQRILDNGYAYESEGSVYFDVERYNKDHRYGILSGRNIEDI 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+   DF LWK+++P     W S W  G PGWH+ECSAM   YLG+ F
Sbjct: 179 IENTRELDGQSDKRRSVDFALWKKASPEHIMRWHSKWSDGFPGWHLECSAMGQKYLGEKF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQS  ++   +    W+HN  + + G+KM KS GNFIT++E 
Sbjct: 239 DIHGGGMDLIFPHHECEIAQSVASNG-HQAVRYWMHNNMITINGQKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------- 339
              + K   +++    IR  +L  HYR   DF+ + L+ ++  LS+  +           
Sbjct: 298 FTGSHKLISQAYSPMTIRFFILQAHYRSTADFSDEALSASQKGLSRLFEAYERLQRLSTG 357

Query: 340 --TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIF 385
             T+      D     A+ +DLNT   I  L   A+     HD            L  +F
Sbjct: 358 TTTTVEMKDWDSLCEEAMNDDLNTPIVIAHLFDAAKVINTVHDGKGSLSQNDIDRLKAVF 417

Query: 386 NA-SAHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +   + ILG++  +      ++   AI+ ++  RL   + K ++ +D IR +L S GF++
Sbjct: 418 STYLSDILGLKTEQGDSKYMESYRRAIDLILNLRLEAKQNKNWALSDKIRDELASYGFVV 477

Query: 443 EDYKNPDNG 451
           +D K     
Sbjct: 478 KDTKEGFEW 486


>gi|260910729|ref|ZP_05917387.1| cysteine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635145|gb|EEX53177.1| cysteine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 536

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 159/501 (31%), Positives = 235/501 (46%), Gaps = 59/501 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + IYNTL R+   F+ +   N+ MYVCGPTVY   H+G+ARP I FDV++R L++  
Sbjct: 42  SSPLLIYNTLTRQKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVVFRYLQHLG 101

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            +  V YVRNITD+          DDKI ++AR E            I    T  +    
Sbjct: 102 YK--VRYVRNITDVGHLEHDADDGDDKIAKKARLEQLEPM------EIAQHYTNTYHAAM 153

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
             L  L P+ +P+A+ HI +   L++ I  +G AYE+N  I FD +       YG  S R
Sbjct: 154 QLLNVLPPSIEPQASGHIIEQEELVKKIFANGFAYESNGSIYFDIAKYNQTHRYGILSGR 213

Query: 169 KIDE-QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +++      ++     K+N ADF LWK + P     W SPWG G PGWH EC+AM   Y
Sbjct: 214 NLEDVLDASRQLDGVGEKRNQADFALWKHAQPEHIMRWPSPWGEGFPGWHCECTAMGRKY 273

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG+DL+FPHHE EIAQ+  A   E+    W+HN  + + G+KM KS GNFI
Sbjct: 274 LGNQFDIHGGGMDLVFPHHECEIAQA-VASEGEQMVRYWMHNNMITINGQKMGKSLGNFI 332

Query: 287 TINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           T+ +    +     +++    IR  +L  HYR  +DF+ + L  +E  L +         
Sbjct: 333 TLEQFFNGSHSALEKAYSPMTIRFFILSAHYRGTVDFSNEALQASEKGLERLLNGIADLQ 392

Query: 346 IIDPA-----------------VLSALYNDLNTVSAIQALHKLARESTKNHD-------- 380
            I PA                    A+ +D  T   +  L +  R      D        
Sbjct: 393 RIQPAKASDEATATIVNELPRKCYEAMNDDFQTPMVLSHLFEACRLINTLIDHKAQISAE 452

Query: 381 ----LLPIFNASA-HILGIEVCKEHL----NKNISIAIEKLVQERLILLKMKKFSSADYI 431
               L       A  +LG+     +      +     ++ ++  R      K ++++D I
Sbjct: 453 HLEQLAATMRLFAFQLLGLNADNSNNNDAREEAFGQVVDMVLDLRAKAKADKDWATSDRI 512

Query: 432 RKQLESKGFILEDYKNPDNGQ 452
           R +L + GF ++D K+    +
Sbjct: 513 RDELAAAGFEVKDTKDGATWK 533


>gi|311107717|ref|YP_003980570.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
 gi|310762406|gb|ADP17855.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
          Length = 484

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 175/496 (35%), Positives = 248/496 (50%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+      +RMYVCG TVYDF H+G+AR ++ FDV+ R LR      
Sbjct: 2   LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGL-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEFYIDAMHADERALGVETPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  M+ +I  +  +G AY+A+  ++ F       YG  S + +D+ + G RV    
Sbjct: 114 ATEYVGDMLDIIGKLEQNGLAYQADDGDVNFAVRGFAGYGKLSGKTLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKAEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI + +  ++    
Sbjct: 234 KFPHHENEIAQTEGAFGG-TLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQEEPAAD 292

Query: 301 S-------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIID 348
                     A ++R  ++  HYR P ++T   L +A+  L +  Q      + ++GI  
Sbjct: 293 QAVYRVNPREAEMVRFFIVRNHYRSPQNYTPDNLIDAQNALDRLYQALQNVPADAQGIDW 352

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIE------ 395
                 A  +A+ +D N+  AI AL +LA E+ +           A A +LG+       
Sbjct: 353 NEPQAQAFKAAMDDDFNSSGAIAALFELASEANRGKSARSAGQLKALASLLGLLQQDPAA 412

Query: 396 ------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                       + +       + AI+ L+  R      + F+ AD IR +L   G  L+
Sbjct: 413 YFQSPTRYSAAAIEQGERRALDAEAIQSLIDARAAAKAARNFAEADRIRAELREAGIELD 472

Query: 444 DYKNPDNGQRMTRWKQ 459
           D         +T+W++
Sbjct: 473 DKPGG-----LTQWRR 483


>gi|227432961|ref|ZP_03914903.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
 gi|227351307|gb|EEJ41591.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           cremoris ATCC 19254]
          Length = 468

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 167/490 (34%), Positives = 238/490 (48%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I    I+MYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IYVYNTLSREKEVFKPITAGKIKMYVCGPTVYNYIHIGNARSAIAFDTVRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA++E        +   + +K    F +DT  L     T + R
Sbjct: 61  -VNYVSNFTDVDDKIINRAQEE------GISELEVANKYADAFDEDTLPLNIKPATVRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP++I  ++++I  G+AYE+  ++ F       YG  + + + E +          
Sbjct: 114 ATEVIPEIIEFVKDLIDKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLNDE 173

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK         W SPWG GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 174 ETIRKEDPIDFAVWKNEPREGVISWSSPWGNGRPGWHIECSVMAQKYLSNTIDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +   N W+HNGF+N+   KMSKS GNF T++++L T     
Sbjct: 234 LAFPHHTNEIAQSEARTGQK-FVNYWMHNGFVNVNNEKMSKSLGNFTTLHDMLATYD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIID- 348
                 VIR  +  T YR PI++    L +A + L +            +TS   G  D 
Sbjct: 290 ---DPMVIRYLLTTTQYRRPINYEASTLEQARLELERIRTAYRNLMFRAETSEPGGNEDV 346

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
                    A   A+ +D NT +A+ A+ +L        +           LL       
Sbjct: 347 ETLIEVQKKAFDQAMDDDFNTPNALAAIFELVSIGNTYTERNTVKVDTVQHLLGTMADLL 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            + GIE      N+ ++    +L+ +R++  +   F  +D +R QL+  G  +ED     
Sbjct: 407 SVFGIEGLDG--NEELTTKQRELLDKRVLARESHDFEESDLLRNQLKEVGIFVEDTPQGQ 464

Query: 450 NGQRMTRWKQ 459
                 RW +
Sbjct: 465 ------RWHK 468


>gi|33519768|ref|NP_878600.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|61216292|sp|Q7VRB4|SYC_BLOFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33504113|emb|CAD83375.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 474

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 173/491 (35%), Positives = 247/491 (50%), Gaps = 57/491 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL +K   F++I    I++YVCG TVYD  H+G+AR  ++FD + R L++Y  + 
Sbjct: 2   LKIFNTLTKKKEIFKSIKCGEIKIYVCGITVYDLCHLGHARTFVIFDTILRYLKHYGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII+RA      I  N+    + S+  Q+   D   L  L P ++P+
Sbjct: 61  -VKYVRNITDIDDKIIQRA------IKNNETTDHLASRMIQEMYLDLDILNILRPNYEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+HI  +I  I+ +I   HAY  ++  ++F   ++ NYG  S  K ++      +  K 
Sbjct: 114 VTDHIELIINFIRLLIERNHAYVTSDGNVMFSIQTVYNYGVLSCHKKNQTFTQRNIRNKM 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF+LWK +   EP W SPWG+GRPGWHIECSA+S  +LGK  DIHGGG DL+FP
Sbjct: 174 IKKDPVDFVLWKTAKSGEPYWISPWGKGRPGWHIECSAISHAFLGKHIDIHGGGSDLVFP 233

Query: 244 HHENEIAQSCCADR--IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HHENEIAQS CA    ++   N WIH G L     KMSKS  NF TI E++       + 
Sbjct: 234 HHENEIAQSTCAHHITVDSYVNTWIHTGMLTFNDEKMSKSLNNFFTIREII-------QK 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSKGII 347
           +    IR  +L  HYR+P+ ++   +  A + L                    + S+   
Sbjct: 287 YDPETIRYFLLSAHYRKPLRYSDNNIKNARLSLKHLYSALHGINFNPIVQLYDNNSEKYF 346

Query: 348 DPAVLSALYNDLNTVSAIQALHKLA--------RESTKNHDLLPIFNASAHILGIEVCKE 399
                + + ND N   A   L ++A        ++  +   L       A+ILGI     
Sbjct: 347 ISKFNNKMNNDFNFPEAYSILFEMAHALNIAKIKDHVRAKSLAAHLKYLANILGILYQDP 406

Query: 400 HL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +                   I +L+  R    K K++  +D IRK+L   G ILED   
Sbjct: 407 EIYLGYNTCIKNNKQSLTVEKIRELIYMRENARKNKEWQLSDKIRKRLTEIGIILEDKPT 466

Query: 448 PDNGQRMTRWK 458
                  T W+
Sbjct: 467 GK-----TIWR 472


>gi|220930684|ref|YP_002507593.1| cysteinyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|220001012|gb|ACL77613.1| cysteinyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 461

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 156/464 (33%), Positives = 232/464 (50%), Gaps = 29/464 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL R+  EF+ I+   +R+Y CGPTVY++AHIGN R  +  D+L R+L+Y     
Sbjct: 1   MKVFNTLSRQKEEFKPINDKEVRIYSCGPTVYNYAHIGNLRTYVFMDILRRVLQYNGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLAPT 120
            + +V NITD+   + +    E   +            I    T  F+KD   L    P 
Sbjct: 59  SLKHVMNITDVGHLVSDEDEGEDKMVKGAREQKKTPWEIAEYYTSVFMKDIRALNIQVPE 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             P+AT HIP+M+  +  ++  G+ YE ++ I FD      YG  SR  +++Q  G RV 
Sbjct: 119 IVPKATEHIPEMLEFVHGLVDSGYGYETSDGIYFDIQKFEGYGKLSRANLEDQIAGARVE 178

Query: 181 EKYHKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               K++PADF LWK++       W S WG G PGWHIECSAM   YLG  FDIH GG+D
Sbjct: 179 VNEEKRHPADFALWKKAPKEHIMQWPSEWGMGYPGWHIECSAMGRKYLGDTFDIHTGGVD 238

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            I  HHENEIAQS    + +   N W+H  F+ +   KMSKS GN  TI+ L E      
Sbjct: 239 HIPVHHENEIAQSEALLK-KSAVNYWMHGEFMMVNNGKMSKSLGNTYTIDNLKE------ 291

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIIDPA----- 350
           + +     R   L  HYR  ++FT   +  A++   ++ +   S    K  +D A     
Sbjct: 292 KGYDPMAFRYMCLNAHYRNKLNFTWDVMQSAQVSYDRFVEGVLSHKDGKEQVDSAVVKEF 351

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG--IEVCKEHLNK-N 404
                 ++ +DLN   A+       R   K+  +  +      I G  ++  KE  ++  
Sbjct: 352 LSDFEDSINDDLNIPKALGVAWNAIRYGKKSQAIYELLTKMNSIFGFILDKKKESTSEPE 411

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           IS  I +L++ER      K +  +D IR +L++ G+ +ED  N 
Sbjct: 412 ISPEIHRLLEERQEARAGKNWKRSDEIRDELKTMGYAVEDTANG 455


>gi|295101451|emb|CBK98996.1| cysteinyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 465

 Score =  508 bits (1308), Expect = e-141,   Method: Composition-based stats.
 Identities = 178/479 (37%), Positives = 257/479 (53%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y     
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E        ++  +  +   +++KD   L C  PT QPR
Sbjct: 59  KVIYVSNITDIDDKLIKKGQEE------GTSMKEVAQRFEAEYLKDAAGLNCKKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--- 180
           AT HI Q++ +++++I  GHAY A N ++ F   S P YG  S  K+D+ + G R     
Sbjct: 113 ATEHIQQILDIVKDLIESGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172

Query: 181 -EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A  W+HNGF+N++ +KMSKS  NF T+ ++        
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDV-------A 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------ 347
             +    IR  ML   YR P+++TV  +   +  L +      +                
Sbjct: 285 NLYGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTAFGTDETL 344

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHI 391
                       +A+ +DLNT  A+ A+  L ++                   F+    +
Sbjct: 345 KEKAEEAKKKFCTAMDDDLNTPDALAAVFDLVKDINTLSAASSKAALEAGAAAFDEITGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D      
Sbjct: 405 LGLMYNRKK--DEVPAEVTELVEKRAAAKKAKDWAAADAIRAQLTGMGWAVKDTAQGPQ 461


>gi|239930483|ref|ZP_04687436.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438844|ref|ZP_06578234.1| cysteinyl-tRNA synthetase 1 [Streptomyces ghanaensis ATCC 14672]
 gi|291341739|gb|EFE68695.1| cysteinyl-tRNA synthetase 1 [Streptomyces ghanaensis ATCC 14672]
          Length = 466

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 159/484 (32%), Positives = 248/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFIPLRPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT++RN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  E--VTFIRNVTDIDDKIIAKSAEQ------GRPWWSIGYENERAFTDGYHALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M+ +++ +I  GHAYEA+  + F  +S P+Y   S ++++   +      +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEADGNVYFAVTSFPDYLKLSNQELENL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGTVFDIHGGGLDLVF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + + E++       + W
Sbjct: 232 PHHENEIAQAKAY--GDEFARYWVHNAWVTMSGEKMSKSLGNSVLVGEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++                     + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRTVELAGGPVEPSAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++ +R      K +++AD IR +L   G ++ED        
Sbjct: 403 GEGDRGEDLHGVVDSLVRLVLDQREAARARKDWATADAIRDRLGQAGLVIEDSPQGPRWN 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|297563235|ref|YP_003682209.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847683|gb|ADH69703.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 467

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 163/480 (33%), Positives = 237/480 (49%), Gaps = 47/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T  R++ EF  +      +Y+CG TV    HIG+ R  + FD+L R L +   
Sbjct: 1   MSLRFYDTSARQVREFVPLREGAASLYLCGATVQAPPHIGHIRSGVNFDILRRWLTHLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+ RN+TDIDDKII  A  E            ++ +N + F      L CL PT +
Sbjct: 61  D--VTFCRNVTDIDDKIIRVASDEGVPWW------QVSERNQRAFTHAYEILGCLPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT H+P+MI L+  +I  GHAY   + + ++ FD  S P YG  S +++D+       
Sbjct: 113 PRATGHVPEMIDLMHRLIDAGHAYAASDGSGDVYFDVRSYPPYGGLSNQRLDQVVESADC 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF LWK + P EP W +PWGRGRPGWH+ECSAM++ YLG  FDIHGGGLD
Sbjct: 173 DADRDKRDPRDFALWKGAKPGEPSWHTPWGRGRPGWHLECSAMATKYLGPSFDIHGGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE+AQS  A      A  W+HNG L + G KMSKS GN + I +++       
Sbjct: 233 LVFPHHENELAQSRAAGDG--FAQYWLHNGLLVVGGEKMSKSLGNSLLIPQMV------- 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDP 349
           R      +R  +   HYR  ID++   L EA     +     T              +  
Sbjct: 284 RKVRPVELRYYLGQVHYRSVIDYSDAALQEAATAYQRIEGFLTRAVEVLGEVAPAADVPA 343

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEH 400
              SAL +DL    A+  +H   RE           +  ++         +LG++   E 
Sbjct: 344 EFASALNDDLGVSQALAVVHGHVREGNTALAAGGKEQAAEIAGELRTMLGVLGLDPLGEQ 403

Query: 401 L----NKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                ++ +   ++ LV    ++R      K +++AD IR QL   G ++ED        
Sbjct: 404 WATGGDQGLREVVDALVAVALEQRQAARGRKDYAAADAIRDQLAGAGVVVEDTPEGPRWD 463


>gi|254526663|ref|ZP_05138715.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221538087|gb|EEE40540.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 489

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 181/510 (35%), Positives = 252/510 (49%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  IV+DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIVWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E        ++  ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEES------SSMKEVSEKNIIEFHKDMDSLGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMAND 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+++      
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRELIKS------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
                 +R  ++  +YR+P+DFT + L  A           +   +   A          
Sbjct: 286 GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKGAFRYIDKNESI 345

Query: 353 --------------------SALYNDLNTVSAIQALHKLAR------------------- 373
                                AL NDLNT  AI  ++ LA+                   
Sbjct: 346 EEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKIDL 405

Query: 374 -ESTKNHDLLPIFNASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSAD 429
            E     +          +LG+E  KE L   +K     I  L+ ERL   K K ++ AD
Sbjct: 406 NEKFFLIENFKTLKKLTKVLGLE--KEVLVKESKITEEEILSLINERLKAKKGKNYAKAD 463

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  L  KG  L D       + +T W +
Sbjct: 464 EIRNLLNEKGIELID-----QSKEITTWIR 488


>gi|217076406|ref|YP_002334122.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|226735065|sp|B7IFB7|SYC_THEAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217036259|gb|ACJ74781.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 469

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 167/483 (34%), Positives = 237/483 (49%), Gaps = 51/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I NT   K  E + I+P  ++MYVCGPTVY++ HIGNARP +VFD   R L Y   + 
Sbjct: 3   IYITNTETGKKEELKTIEPGVVKMYVCGPTVYNYIHIGNARPAVVFDAFRRFLEYRGYK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TDIDDKII  A +             +      ++ KD   L   A    PR
Sbjct: 62  -VIMVQNFTDIDDKIINEANE------WGVDFKDVADTFIAEYWKDAQSLGIRAANFHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+++ +++  ++ +I  G+AY   N ++ F       YG  S +KI++   G RV    
Sbjct: 115 TTDYVNEIVDAVEKLISKGYAYTVENGDVYFSVKKFERYGKLSGKKIEDLISGARVEVNT 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF LWK   P EP W+SPWG GRPGWHIECS MS   LG  FDIH GG DLIFP
Sbjct: 175 LKKDPLDFALWKAVKPGEPSWDSPWGCGRPGWHIECSVMSQKLLGDTFDIHAGGEDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE+E +QS      +  A  W+HNG +   G KMSKS GN   + E +       + + 
Sbjct: 235 HHEDEKSQSEALTG-KPFARYWMHNGMIITRGDKMSKSIGNVFLVREAV-------KRYG 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKW---------PQTSTSKGII 347
              ++L +L  HYR PI+F+ + + E +         L+++         P+       I
Sbjct: 287 KDAVKLFLLSKHYRTPIEFSDEIMMENKKAALKVLKTLNRFEEKYPYPKVPKRDEYMNDI 346

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------AHILGI--E 395
           +   + AL +D NT  AI  +  L++E  K  D      A             ILG+   
Sbjct: 347 EQKFVEALEDDFNTPKAIALIFDLSKELNKAMDEGKDDEALKRYHLITRVFGSILGLFEG 406

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             K    +N +  IE++++ R    K K F +AD IR  L +    + D  +       T
Sbjct: 407 GVKISEGENTNKVIEEILKVRQEFRKAKNFEAADKIRDALLNSNVKILDTPD------GT 460

Query: 456 RWK 458
           +W+
Sbjct: 461 KWE 463


>gi|78779620|ref|YP_397732.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|109894919|sp|Q319Z9|SYC_PROM9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78713119|gb|ABB50296.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 489

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 183/510 (35%), Positives = 256/510 (50%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E        ++  ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEES------SSMKEVSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINKQGRMANE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K+NP DF LWK++   EP ++SPWGRGRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENNKKQNPQDFALWKKAKNDEPFFDSPWGRGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+++      
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------QTSTSKGII 347
                 +R  ++  +YR+P+DFT + L  A                     ++      I
Sbjct: 286 GISPMTLRYFVMTVNYRKPLDFTEEALRSAAEAWKNINLALSFMDLTKGAFRSIDKNESI 345

Query: 348 DPA---------------VLSALYNDLNTVSAIQALHKLAR-----------------ES 375
           +                    AL NDLNT  AI  ++ LA+                 + 
Sbjct: 346 EEEYKEKLSFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRIEGLKIDL 405

Query: 376 TKNHDLLPIFN---ASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSAD 429
            +   LL  F        +LG++  KE L K        I  L+ ERL   K K ++ AD
Sbjct: 406 NEKFFLLENFKTLEKLTEVLGLK--KEVLVKERKITEEEISSLINERLKAKKGKNYAKAD 463

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  L+ KG  L D       + +T W +
Sbjct: 464 EIRNLLKEKGIELID-----QSKEITTWIR 488


>gi|121535688|ref|ZP_01667492.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121305719|gb|EAX46657.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 370

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 143/380 (37%), Positives = 198/380 (52%), Gaps = 37/380 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL ++  EF   +P  ++MYVCG T Y+  HIGNARP I +DV+ R L +     
Sbjct: 3   LRVYNTLTKQKEEFVPREPGKVKMYVCGVTPYNHPHIGNARPFITWDVIRRYLEHRGF-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII  A QE            I ++    + +   +L        PR
Sbjct: 61  AVFHVQNFTDIDDKIINTANQE------GVTWDTIANRYIAAYFEVMDKLNVRRAHVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HI  +I ++Q +I  G+AY    ++ +       YG  S R +++ K G R+     
Sbjct: 115 VSDHIGDIIAIVQRLIDKGYAYTVGGDVYYSVEKFAPYGQLSGRSLEDMKAGARIDVDER 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+  YLG  FD HGGG DLIFPH
Sbjct: 175 KRHPMDFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMALKYLGNGFDFHGGGSDLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS            W+HNGF+ +   KMSKS GNF  + ++L         +P 
Sbjct: 235 HENEIAQSEAYTGEAPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILA-------HYPP 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------ST 342
            V+R  +L THYR P+DF+ +RL EA   L +                            
Sbjct: 288 EVLRFFILSTHYRSPLDFSDERLAEAGRSLERLRTAVHNIRQLEKLPGGAGGEQADTVRR 347

Query: 343 SKGIIDPAVLSALYNDLNTV 362
           +         +A+ +D NT 
Sbjct: 348 AAAQAKAEFYAAMDDDFNTA 367


>gi|299142423|ref|ZP_07035555.1| cysteine--tRNA ligase [Prevotella oris C735]
 gi|298576145|gb|EFI48019.1| cysteine--tRNA ligase [Prevotella oris C735]
          Length = 496

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 162/508 (31%), Positives = 238/508 (46%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R+   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQNLIIYNTLTRQKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I    T ++   
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQYYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKEILKNGYAYESNGSIYFDVEKYDKEHKYGILSG 172

Query: 168 RKIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R + +    +R       KKN  DF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLTDMINNSRELQGVGEKKNQVDFALWKKAQPEHIMRWPSPWSVGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGSHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +      +   +++    IR  +L  HYR  +DF+ + L  A+    +        
Sbjct: 292 ITLEQFFTGNHESLTQAYTPMTIRFFILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDL 351

Query: 345 G-----------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------- 380
                                     A+ +DL T   I  L +         D       
Sbjct: 352 ERVPVSSHCDAETDKFVKAFRQRCYEAMNDDLQTPLVISYLFEACHLINTLLDHKAEICA 411

Query: 381 -----LLPIFNASA-HILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKKFSSADY 430
                L  +    A  +LG++  K   N    +     ++ ++  R      K ++++D 
Sbjct: 412 DCLKELSDVLKLFAFDLLGLQSEKGANNVAREEAYGKVVDMVLDLRAKAKADKDWTTSDK 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR  L + GF ++D K+         WK
Sbjct: 472 IRDALAAAGFEVKDTKD------GVTWK 493


>gi|302535869|ref|ZP_07288211.1| cysteinyl-tRNA synthetase [Streptomyces sp. C]
 gi|302444764|gb|EFL16580.1| cysteinyl-tRNA synthetase [Streptomyces sp. C]
          Length = 466

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 164/484 (33%), Positives = 252/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  ++   + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFVPLEQGCVSIYLCGATVQAAPHIGHIRSGLNFDMMRRWFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKII ++ ++            I  +N + F    T L CL PT++
Sbjct: 61  D--VTFVRNVTDIDDKIIAKSAEQRRPWW------SIGYENERAFNDGYTALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ +M+ +++ +I  GHAYE+   + FD  S P Y S SR+++D  +      E 
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYESEGNVYFDVKSFPGYLSLSRQELDNIRQPESTGET 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK   P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGGLDLIF
Sbjct: 173 -GKRDPRDFAMWKSVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  AN W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDAFANYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KQW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++                 +   + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFYQRVIEKAGGPVEAAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQALAIVHTTVRQGNSALAADDKDEAIARLAEVRAMLGVLGLDPLDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++++R      K +++AD IR QL   G ++ED  +     
Sbjct: 403 GEADRGEDLHGAVDTLVRLVLEQRESARARKDWATADAIRDQLNQSGLVIEDSPSGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|89890596|ref|ZP_01202106.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
 gi|89517511|gb|EAS20168.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
          Length = 494

 Score =  507 bits (1307), Expect = e-141,   Method: Composition-based stats.
 Identities = 161/488 (32%), Positives = 239/488 (48%), Gaps = 42/488 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +K+++YN+L  +   F++I+   + MYVCGPTVY   H+GN R  I FD++YR L++  
Sbjct: 6   DQKLQLYNSLTGEKEIFKSINEGLVGMYVCGPTVYSNVHLGNCRTFISFDMIYRYLQHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     DD      +    +         I  + T  F     +   L
Sbjct: 66  YK--VRYVRNITDAGHLTDDADEGEDKISKKARVEKLEPMEIVQQYTLDFHNVLNKFNNL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P  +P AT HI + I +I+ II +G+AYE N  I F+         YG  S RK+++  
Sbjct: 124 PPNIEPTATGHIVEQIEIIKTIIDNGYAYERNGSIYFNVLKFNEDHEYGKLSGRKLEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K NP DF LWK+++P     W SPWG G PGWH+EC+ MSS YLG+ FD
Sbjct: 184 ANTRALDAQSEKDNPQDFALWKKASPAHIMRWPSPWGDGFPGWHLECTVMSSKYLGETFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ   A       N W+H   L L G+KMSKS GN I   EL 
Sbjct: 244 IHGGGMDLKFPHHECEIAQGEAAHGHSP-VNYWLHANMLTLNGKKMSKSTGNSILPEELF 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-- 349
                F  +++   V+R  M+  HYR  +DF+   +  AE   ++  +   +   + P  
Sbjct: 303 TGDNDFMEKAFSPSVVRFFMMQAHYRSVLDFSNDAILAAEKGFNRLSEAIKTIDDLTPSK 362

Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
                         +A+ +D N+   I  L + A+      +            +   FN
Sbjct: 363 ESSIDVPAWVERCYAAMNDDFNSPILIAELFEGAKMIHAVKEGKQTATAGDTELIKETFN 422

Query: 387 ASA-HILGIEVCKE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           A    +LG+E   +     +K++  A++ ++  R      K ++++D IR QL + G  L
Sbjct: 423 AFFYDVLGLETASKTGSTDSKHLDGAMQLIIDLRTQARANKDWATSDQIRDQLVAAGIQL 482

Query: 443 EDYKNPDN 450
           +D  +   
Sbjct: 483 KDGADGTT 490


>gi|297200591|ref|ZP_06917988.1| cysteinyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
 gi|197709716|gb|EDY53750.1| cysteinyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
          Length = 465

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 164/488 (33%), Positives = 246/488 (50%), Gaps = 53/488 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFAPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+VRN+TDIDDKII +A ++            I  +N + F    T L CL P+++
Sbjct: 61  E--VTFVRNVTDIDDKIIAKAAEQKRPWW------AIGYENERAFNDGYTALGCLPPSYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ +M+ ++Q +I  GHAYE++  + FD  S P Y   SR+++D   +      +
Sbjct: 113 PRATGHVTEMVEMMQGLIERGHAYESDGNVYFDVRSFPGYLELSRQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP W +PWG GRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKSAKPGEPTWSTPWGPGRPGWHLECSAMAHKYLGTAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDDFAQYWVHNAWVTMAGDKMSKSLGNSVLVSEMV-------KQW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVL 352
              V+R  +   HYR  I+++   L EAE   ++                    + PA  
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEDALREAESAFARIEGFVQRVVEKAGPVEPSAEVPPAFA 342

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
            A+ +DL    A+  +H   R+                L    A   +LG++   EH   
Sbjct: 343 EAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEHWAG 402

Query: 404 N----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                      +   +  ++ +R      K +++AD IR QL   G  +ED      G +
Sbjct: 403 ETDRGDDLHGVVDSLVRLVLDQREAARARKDWATADAIRDQLGQSGLTIED------GPQ 456

Query: 454 MTRWKQKP 461
             RW   P
Sbjct: 457 GPRWTLGP 464


>gi|257438112|ref|ZP_05613867.1| cysteine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257199443|gb|EEU97727.1| cysteine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 465

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 179/479 (37%), Positives = 258/479 (53%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL R+  EF    P   R+YVCGPTVY++ HIGNARP+IVFD L R L Y     
Sbjct: 1   MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ ++E        ++  +  +   +++KD   L C  PT QPR
Sbjct: 59  KVIYVSNITDIDDKLIKKGQEE------GTSMKEVAQRFEAEYLKDAAGLNCKKPTVQPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--- 180
           AT HI Q++ +++++I  GHAY A N ++ F   S P YG  S  K+D+ + G R     
Sbjct: 113 ATEHIQQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172

Query: 181 -EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF +WK + P EP WESP+G GRPGWHIECSAMS  +LGK  D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+  E  A+ W+HNGF+N++ +KMSKS  NF T+ ++ +      
Sbjct: 233 LIFPHHENEIAQSECANGCE-FAHYWMHNGFINVDNQKMSKSLHNFFTVRDVADL----- 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------QT 340
             +    IR  ML   YR P+++TV  +   +  L +                       
Sbjct: 287 --YGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTAFGTDETL 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHI 391
           +            A+ +DLNT  A+ A+  L +E                   F+    +
Sbjct: 345 TAKADEARAKFCKAMDDDLNTPDALAAVFDLVKEINTLSAASSKAALEAAAKAFDEITGV 404

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           LG+   ++     +   + +LV++R    K K +++AD IR QL   G+ ++D      
Sbjct: 405 LGLMYNRKK--DEVPAEVTELVEKRAAAKKAKDWAAADAIRAQLTEMGWAVKDTAQGPQ 461


>gi|332884059|gb|EGK04339.1| cysteinyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
          Length = 491

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 167/500 (33%), Positives = 243/500 (48%), Gaps = 49/500 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK   F+ +   ++ MYVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MEQKLLVYNTLTRKKEVFEPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDILFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                +      ++ K    L  
Sbjct: 61  GYK--VRYVRNITDVGHLENDADEGEDKIAKKARLEQLEPMEVVQYYVNRYHKAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQ 173
           L+P+ +P A+ HI + I  I+ I+  G+AYE+N  + FD        +YG  S R I+E 
Sbjct: 119 LSPSIEPHASGHIIEQIEAIKGILKAGYAYESNGSVYFDVEKYNKDYDYGILSHRNIEEM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K++  DF LWK++ P     W SPW  G PGWHIECS MS  YLG+ F
Sbjct: 179 LNTTRELDGQEEKRSRVDFALWKKAAPEHIMRWPSPWSDGFPGWHIECSTMSIKYLGREF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDL+FPHHE EIAQ+  A    +    W+HN  + + G+KM KS GNFIT++E 
Sbjct: 239 DIHGGGLDLMFPHHECEIAQN-TAMEKHQVVRYWMHNNMITIGGQKMGKSLGNFITLDEF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
              + K   +++    IR  +L  HYR  +DF+ + L  AE  L +              
Sbjct: 298 FTGSHKMLVQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKSLERLYDAYARIEKIPVS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIF 385
              S     I      AL +DLN+   I  L +                    ++L  +F
Sbjct: 358 ATSSVDVKNIRNKCYEALNDDLNSAIVIAHLCEAGTTINSASTGNITLSQEDINELKEVF 417

Query: 386 N-ASAHILGIEV----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +     ILGI           N+    A++ L++ R    + K ++++D IR +L   GF
Sbjct: 418 DIFLFGILGIRNDAIGANSGNNEAFGKAVDLLLEIRQKAKENKDWATSDQIRNELAKAGF 477

Query: 441 ILEDYKNPDNGQRMTRWKQK 460
            ++D K+         WK K
Sbjct: 478 EIKDGKDGAE------WKLK 491


>gi|294675457|ref|YP_003576073.1| cysteine--tRNA ligase [Prevotella ruminicola 23]
 gi|294474025|gb|ADE83414.1| cysteine--tRNA ligase [Prevotella ruminicola 23]
          Length = 496

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 163/502 (32%), Positives = 235/502 (46%), Gaps = 53/502 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+ IYNTL R+   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+++R L++ 
Sbjct: 1   MESKLVIYNTLTRQKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDLVFRYLKHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +    E                I    T ++      L  
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEIAQYYTNRYHAAMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P AT HI +   L+Q I+ +G AYE+N  I FD  +      YG  S R ++  
Sbjct: 119 LRPSIEPHATGHIIEQQQLVQQILDNGFAYESNGSIYFDIEAYNKKFQYGILSGRSLENV 178

Query: 174 KMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           K  +R  +    K+N ADF LWK++ P     W SPW  G PGWH EC+AM   YLG+ F
Sbjct: 179 KDASRELDGVGEKRNQADFALWKKAQPEHIMRWPSPWSDGFPGWHCECTAMGRKYLGEEF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE EIAQ+  +         W+HN  L + G+KM KS  NFIT+ + 
Sbjct: 239 DIHGGGMDLVFPHHECEIAQAQASMG-HPAVKYWMHNNMLTINGQKMGKSYNNFITLEQF 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                    +++    IR  +L  HYR  +DF+ + L  AE  L K          +  A
Sbjct: 298 FTGNHPLLKKAYSPMTIRFFVLSAHYRGTVDFSNEALEAAEKGLEKMMNAIADLERVQVA 357

Query: 351 -----------------VLSALYNDLNTVSAIQALHKLARESTKN--------HDLLPIF 385
                               A+ +DL T   I  L +      K          D L   
Sbjct: 358 DKCDAETEKVVKALRQKCYDAMNDDLATPQVISYLFEACTVVNKLTDHKATICADCLQEL 417

Query: 386 NASAH-----ILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLE 436
             + H     ILG++  K   N     A    ++ +++ R      K ++++D IR +L 
Sbjct: 418 KETMHLFAEDILGLKAEKSGTNDEREAAFGKVMDMVLELRAKAKADKDWATSDKIRDELA 477

Query: 437 SKGFILEDYKNPDNGQRMTRWK 458
           + GF ++D K+         WK
Sbjct: 478 AAGFEVKDTKD------GVTWK 493


>gi|91763128|ref|ZP_01265092.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717541|gb|EAS84192.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 451

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 190/470 (40%), Positives = 276/470 (58%), Gaps = 31/470 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I + N L+ K  +F  I+  NI MYVCGPTVYD  HIGNARP+++FD+L+++L+  YG
Sbjct: 1   MDIFLTNNLKNKKEKFVPINKENIGMYVCGPTVYDNPHIGNARPLVIFDILFKVLKSKYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              + Y+RNITD+DDKII+ A+++      N +IS +T+   + F  D   L    PT Q
Sbjct: 61  HDKINYIRNITDVDDKIIKSAKEK------NLSISELTNNVIKDFNDDCNYLNLDNPTQQ 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT+HI  MI +I  +I    AYEANN + F+ S   +YG  S +K+++   G+RV   
Sbjct: 115 PKATDHIDLMIKMISTLIEKDFAYEANNHVYFEVSKFDDYGKLSNKKLEDLIAGSRVEVS 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +KK   DF+LWK S   EP W+S WG+GRPGWH+ECSAMS  YLG VFDIHGGG+DLIF
Sbjct: 175 DNKKKSEDFVLWKPSKDDEPSWDSSWGKGRPGWHLECSAMSKKYLGNVFDIHGGGIDLIF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA+  +  AN WIHN F+ +   KM+KS GN + I +  +         
Sbjct: 235 PHHENEIAQSRCANDSKVFANYWIHNAFITMSNEKMAKSTGNILKIKDFKDNV------- 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYNDL 359
              V++LA++  HY++P+D+  + L + +  + KW +       K ++D  +LS LY+DL
Sbjct: 288 DGQVLKLALMSAHYKQPLDWNEKLLEDCKNTIDKWYEVYLPPKDKIVLDEDILSPLYDDL 347

Query: 360 NTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEV--------CKEHLNKNISIAIE 410
           NT   I  LH+L  ++ K  ++   +F  + + +GI           K+  +      I 
Sbjct: 348 NTPGYIAKLHQLYDKALKGGNEEKSLFVLACNFIGILNKTKEEWIEFKKKKSSINEDDIL 407

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +++  R    + K +  AD IR +L  KG ++ED K+       T WK K
Sbjct: 408 EMISLRNKAREDKNYKEADIIRDKLLDKGVLIED-KDGK-----TIWKLK 451


>gi|116617314|ref|YP_817685.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|122272485|sp|Q03ZR0|SYC_LEUMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116096161|gb|ABJ61312.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 468

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 167/490 (34%), Positives = 237/490 (48%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I    I MYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   IYVYNTLSREKEVFKPITAGKINMYVCGPTVYNYIHIGNARSAIAFDTVRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA++E        +   + +K    F +DT  L     T + R
Sbjct: 61  -VNYVSNFTDVDDKIINRAQEE------GISELEVANKYADAFDEDTLPLNIKPATVRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP++I  ++++I  G+AYE+  ++ F       YG  + + + E +          
Sbjct: 114 ATEVIPEIIEFVKDLIDKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLNDE 173

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK         W SPWG GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 174 ETIRKEDPIDFAVWKNEPREGVISWSSPWGNGRPGWHIECSVMAQKYLSNTIDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +   N W+HNGF+N+   KMSKS GNF T++++L T     
Sbjct: 234 LAFPHHTNEIAQSEARTGQK-FVNYWMHNGFVNVNNEKMSKSLGNFTTLHDMLATYD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIID- 348
                 VIR  +  T YR PI++    L +A + L +            +TS   G  D 
Sbjct: 290 ---DPMVIRYLLTTTQYRRPINYEASTLEQARLELERIRTAYRNLMFRAETSEPGGDEDV 346

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
                    A   A+ +D NT +A+ A+ +L        +           LL       
Sbjct: 347 ETLIEVQKKAFDQAMDDDFNTPNALAAIFELVSIGNTYTERNTVKVDTVQHLLGTIADLL 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            + GIE      N+ ++    +L+ +R++  +   F  +D +R QL+  G  +ED     
Sbjct: 407 SVFGIEGLDG--NEELTTKQRELLDKRVLARESHDFERSDLLRNQLKEVGIFVEDTPQGQ 464

Query: 450 NGQRMTRWKQ 459
                 RW +
Sbjct: 465 ------RWHK 468


>gi|330718101|ref|ZP_08312701.1| cysteinyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 469

 Score =  507 bits (1306), Expect = e-141,   Method: Composition-based stats.
 Identities = 168/490 (34%), Positives = 247/490 (50%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL  +   F++I P+ I MYVCGPT+Y++ HIGNAR  I FD + R   +   E 
Sbjct: 2   IHVYNTLTHQKEIFKSIQPNLITMYVCGPTIYNYIHIGNARSAIAFDTIRRYFEFRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII RA +E        + + IT K  Q F  DT  L     T + +
Sbjct: 61  -VNYVSNFTDVDDKIINRAHEE------GVSEATITEKYAQAFENDTLPLNIKPATVRSK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP +I  +  +I  G+AYEA+ ++ F       YG  + + ++E + G        
Sbjct: 114 ATEVIPDIISFVSELIAKGYAYEADGDVYFRARQFKGYGILAHQDLNELEAGASGRLDPE 173

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++  DF +WK  + P    W+SPWG GRPGWHIECS M+  YLG   D+HGGG+D
Sbjct: 174 ELAKKEDALDFAVWKSENRPGVISWDSPWGNGRPGWHIECSVMAQKYLGNTIDVHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +   + W+HNGF+N+   KMSKS GNFIT++++LE      
Sbjct: 234 LAFPHHTNEIAQSEARTG-QTFVHYWLHNGFVNINDEKMSKSLGNFITLHDMLE------ 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
           R      IR  +  T YR PI+++   LT+A + L +      +                
Sbjct: 287 RYDDPMTIRYLLSTTQYRRPINYSEDTLTQARVELDRIRTAYRNLHFRMKDSKDGRNEAV 346

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
                      ++A+ +D NT +A+ A+ +L   +    +           LL    A  
Sbjct: 347 ESDINEYKKQFIAAMDDDFNTQNALAAIFELIALANTYSEAAIIQRDTAMLLLETMTALM 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            + GIE       + +++  + L+++R+I  + K FS +D IR  L+ +  I+ED     
Sbjct: 407 QVFGIETLMPV--EQLTVEQQSLLEQRVIARQNKDFSESDRIRDILKLQDIIVEDTAQGQ 464

Query: 450 NGQRMTRWKQ 459
                 RW +
Sbjct: 465 ------RWHK 468


>gi|302559960|ref|ZP_07312302.1| cysteinyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
 gi|302477578|gb|EFL40671.1| cysteinyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
          Length = 466

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 161/489 (32%), Positives = 247/489 (50%), Gaps = 54/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFTPLQPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT++RN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  --AVTFIRNVTDIDDKIIAKSAEQ------GRPWWSIGFENERAFTNGYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +M+ +++ +I  GHAYEA+  + F  +S P Y   S +++D   +      +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEADGNVYFAVASFPEYLELSNQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAY--GDEFARYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++                     + PA 
Sbjct: 283 RPVVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGVVEPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
             A+ +D+    A+  +H   R+                L    A   +LG++    H  
Sbjct: 343 AEAMDDDMGVPQALAVVHTTVRQGNSALAADDKEEAVARLAEVRAMLGVLGLDPLDPHWA 402

Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                       +   +  ++ +R      K + +AD IR QL   G ++ED      G 
Sbjct: 403 GESDRGQDLHGAVDTLVRMVLDQREAARARKDWPTADAIRDQLNQSGLVIED------GP 456

Query: 453 RMTRWKQKP 461
           +  RW   P
Sbjct: 457 QGPRWSLGP 465


>gi|323343623|ref|ZP_08083850.1| cysteine--tRNA ligase [Prevotella oralis ATCC 33269]
 gi|323095442|gb|EFZ38016.1| cysteine--tRNA ligase [Prevotella oralis ATCC 33269]
          Length = 496

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 166/508 (32%), Positives = 243/508 (47%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ IYNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQRLVIYNTLSRKKEVFKPLHAPNVGMYVCGPTVYGAPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I       +   
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYANSYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +PRAT HI +   L+  I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPRATGHIIEQEELVNEILKNGYAYESNGSIYFDIEKYNRKHRYGILSG 172

Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  E    K N ADF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINNSRALEGVEEKHNQADFALWKKAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS- 343
           IT+ +  + T +   +++    IR  +L  HYR  +DF+ + L  +     +        
Sbjct: 292 ITLEQFFKGTHESLSQAYSPMTIRFFILSAHYRGTVDFSNEALIASAKGFDRLMTGIADI 351

Query: 344 ----------------KGIIDPAVLSALYNDLNTVSAIQALHKLA---------RESTKN 378
                            G +      A+ +DL T + I  L +           +     
Sbjct: 352 ARVPVSSESDEAVKQFVGELRQKCYDAMNDDLQTPTVISNLFEACHVINSLLDHKARISA 411

Query: 379 HDLLPIFNAS----AHILGIEVCKEHLNKNISI----AIEKLVQERLILLKMKKFSSADY 430
            DL  + +        ILG++  K   N          ++ ++  R    + K ++++D 
Sbjct: 412 TDLADLADTMHLFALDILGLKSEKGINNDAREASYGKVVDMVLALRAKAKQNKDWTTSDQ 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR  L   GF ++D K+         WK
Sbjct: 472 IRDALAEAGFEVKDTKD------GVTWK 493


>gi|124026295|ref|YP_001015411.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|171769740|sp|A2C3T6|SYC_PROM1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|123961363|gb|ABM76146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 500

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 179/517 (34%), Positives = 254/517 (49%), Gaps = 80/517 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K  NTL +K  +F +I+P+ +++Y CG TVYD  H+G+AR  + +DVL R L +   
Sbjct: 1   MSLKFTNTLSKKKEDFISINPNQVKIYCCGVTVYDLCHLGHARSYLNWDVLRRFLIWKGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +V+N TDIDDKII RA +E        +   ++ +N  +F KD   L+ L PT  
Sbjct: 61  E--VKFVQNFTDIDDKIINRANKE------GCSTDELSERNIDEFHKDMDTLSILRPTSM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
           PRAT  + Q+I  I+ +     AY +N ++ F  +   NYG  S R+I+ Q        +
Sbjct: 113 PRATKCLHQIINFIEELEQKKVAYSSNGDVYFSVNKHKNYGKLSGREIENQIDNAAGRLK 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +K  KKN  DF LWK+S   E  + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 TNQKESKKNSLDFALWKKSNSGEVSYSSPWGNGRPGWHIECSAMVKQELGESIDIHLGGS 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS   +  E  A  W+HNG +N+ G KMSKS GNF TI  LLE     
Sbjct: 233 DLIFPHHENEIAQSEACNGKE-LAKYWLHNGMVNVGGEKMSKSLGNFTTIRSLLE----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQTSTSKGI 346
                   +R  +L T+YR+P+DFT + L  A     +                + ++ I
Sbjct: 287 -EGISPMTLRFFVLQTNYRKPLDFTQEALKAASKGWERLNNCLSFGYIYKIKDQAKNEII 345

Query: 347 IDP-------------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLL----- 382
           +D                         + +DLNT  A+  L +L++   K  + L     
Sbjct: 346 LDKPIKKSANTNLDKESFKLLSDFERYMDDDLNTSGALSILFELSQPIRKIINFLKEKDI 405

Query: 383 ---------------PIFNASAHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKM 422
                           + +  A +LG++V   H N     +  +  IE+L+++R +    
Sbjct: 406 NEVDQDELNQVFYKWELLSELAAVLGLKVNLNHENPKNNPELDTNKIEELIKKRSLAKAN 465

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           K F  AD IR   ++ G  L D         +T WKQ
Sbjct: 466 KDFLLADKIRDDFKNIGIDLIDKPKG-----VTEWKQ 497


>gi|288928857|ref|ZP_06422703.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
 gi|288329841|gb|EFC68426.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
          Length = 543

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 160/501 (31%), Positives = 239/501 (47%), Gaps = 59/501 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + IYNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FDV++R L++  
Sbjct: 49  TSPLLIYNTLTRKKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVVFRYLQHQG 108

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            +  V YVRNITD+          DDKI ++AR E            I    T  +    
Sbjct: 109 YK--VRYVRNITDVGHLEHDADDGDDKIAKKARLEQLEPM------EIAQHYTNTYHAAM 160

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
             L  L P+ +P+A+ HI +   L++ I+ +G AYE+N  I FD +       YG  S R
Sbjct: 161 QLLNVLPPSIEPQASGHIIEQEELVKKILANGFAYESNGSIYFDIAKYNETHRYGILSGR 220

Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +++    +R +     K+N ADF LWK + P     W SPWG G PGWH EC+AM   Y
Sbjct: 221 NLEDVLDASRKLDGVGEKRNQADFALWKHAQPEHIMRWPSPWGDGFPGWHCECTAMGRKY 280

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FDIHGGG+DLIFPHHE EIAQ+  A+  E+    W+HN  + + G+KM KS GNFI
Sbjct: 281 LGEHFDIHGGGMDLIFPHHECEIAQAVAAEG-EQMVRYWMHNNMITINGQKMGKSLGNFI 339

Query: 287 TINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           T+ +          +++    IR  +L  HYR  +DF+ + L  +E  L +         
Sbjct: 340 TLEQFFNGAHPALEKAYSPMTIRFFILSAHYRGTVDFSNEALQASEKGLERLLNGIADLQ 399

Query: 346 IIDPA-----------------VLSALYNDLNTVSAIQALHKLARESTK--------NHD 380
            I PA                    A+ +D  T   +  L +  R            + +
Sbjct: 400 RIQPAKTSDEATATIVNELPRKCYEAMNDDFQTPMVLSHLFEACRLINTLIDHKAQISAE 459

Query: 381 LLPIFNASAHILGIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYI 431
            L     + H+   ++   +           +     ++ ++  R      K ++++D I
Sbjct: 460 HLEQLATTMHLFAFQLLGLNADNGNNNDAREEAFGHVVDMVLDLRAKAKADKDWATSDRI 519

Query: 432 RKQLESKGFILEDYKNPDNGQ 452
           R +L S GF ++D K+    +
Sbjct: 520 RDELASAGFEVKDTKDGATWK 540


>gi|326778447|ref|ZP_08237712.1| cysteinyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658780|gb|EGE43626.1| cysteinyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 466

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 159/484 (32%), Positives = 251/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKSAEQ------GRPWWSIGYENERAFNDGYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI +++ +I  GHAYEA+  + FD  S+P Y + S +++D+ +  +    +
Sbjct: 113 PRATGHIPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLTLSNQELDDLRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DL+F
Sbjct: 172 TGKRDQRDFAMWKATKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLVF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HNG++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQATAY--GDEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++             +       + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKTGEVVPPADEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+  DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAADRLAEVRAMLGVLGLDPLDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++ +R      K +++AD IR QL   G ++ED        
Sbjct: 403 GEGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIEDSPAGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|150024693|ref|YP_001295519.1| cysteinyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
 gi|187629821|sp|A6GX80|SYC_FLAPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149771234|emb|CAL42703.1| Cysteine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
          Length = 495

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 169/490 (34%), Positives = 225/490 (45%), Gaps = 44/490 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + IKIYN+L  +   F  I+  NI MYVCGPTVY   H+GN R  + FDV+YR   +  
Sbjct: 6   SQSIKIYNSLSGEKEIFSPINEGNIGMYVCGPTVYSNVHLGNVRTFMSFDVIYRYFLHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V Y+RNITD+    DD      +    +         I  + T  F         L
Sbjct: 66  YK--VRYIRNITDVGHIVDDVDHGEDKIAKKAKLEQLEPMEIVQRYTVDFHNVLKAYNLL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQK 174
            P+ +P AT HI + I +++ II  G  YE+N  + FD         YG  S R I++  
Sbjct: 124 PPSIEPTATGHIIEQIEIVKTIINKGIGYESNGSVYFDVVKFNESNHYGKLSGRNIEDML 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K+N  DF LWK++ P     W SPW  G PGWH+EC+AMS+ YLG  FD
Sbjct: 184 ANTRDTDGQSDKRNHQDFALWKKAEPEHIMRWPSPWSDGFPGWHLECTAMSTKYLGSHFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ       E   N W+H   L L G+KMSKS GN I  +E+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQGEACTGQEP-VNYWMHANMLTLNGKKMSKSTGNNILPSEIY 302

Query: 293 ETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
                F  +++ A V R  ML  HYR  +DFT   +  AE    +  +   S        
Sbjct: 303 SGGSPFLTKAFSASVARFFMLQAHYRSNLDFTNDAILAAEKGFYRLMEAIGSLKNTAQFT 362

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFN 386
                             A+ +D NT   I  L +  R         E+    DLL    
Sbjct: 363 TSNTTSIDIKAWKQNCYDAMNDDFNTPILIAHLFEGVRFVNVLKENKETITTEDLLDFLT 422

Query: 387 AS----AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                   +LG+E  K   N N  +   +E L+Q R      K F+ +D IR QL + G 
Sbjct: 423 TMNAFVFDVLGLEDEKLATNNNDKLDGVVEMLIQMRKQARDNKDFAMSDQIRDQLLALGI 482

Query: 441 ILEDYKNPDN 450
            L+D K    
Sbjct: 483 QLKDSKEGTT 492


>gi|282880438|ref|ZP_06289145.1| cysteine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
 gi|281305541|gb|EFA97594.1| cysteine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
          Length = 496

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 163/508 (32%), Positives = 245/508 (48%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK   F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLFVYNTLTRKKELFEPLHAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I    T ++   
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  + FD        +YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSVYFDIEKYNKDHHYGILSG 172

Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  +    K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLDDVINNSRELDGVGEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVRYWMHNNMITINGKKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +    +     + +    IR  +L  HYR  +DF+ + L  ++  L +        
Sbjct: 292 ITLEQFFTGEHDSLEQPYSPMTIRFFILSAHYRGTVDFSNEALQASQKGLERLMNGVHDL 351

Query: 345 GIIDPA-----------------VLSALYNDLNTVSAIQALHKLARESTKNHD------- 380
             +  A                    A+ +DL T   I  L +         D       
Sbjct: 352 ERLQAAATSNEATHKFVAELRQQCYDAMNDDLQTPVVISKLFEACHIINTLLDHTGSIDQ 411

Query: 381 -LLPIFNASAH-----ILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
             L       H     +LG++  + + N     A    ++ +++ R    + K ++++D 
Sbjct: 412 KDLDELKEVMHLFAFDLLGLKNEQGNDNDAREAAYGKVVDMVLELRAKAKQAKDWATSDQ 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR  L + GF ++D K+         WK
Sbjct: 472 IRDALAANGFEVKDTKD------GVTWK 493


>gi|297566117|ref|YP_003685089.1| cysteinyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
 gi|296850566|gb|ADH63581.1| cysteinyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
          Length = 481

 Score =  507 bits (1305), Expect = e-141,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 232/487 (47%), Gaps = 50/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F    P  + MYVCGPTVY   H+G+AR  +VFDVL R L +   + 
Sbjct: 3   LQLYNTLTRQKEPFVPATPGYVGMYVCGPTVYGDPHLGHARGPVVFDVLRRWLLHQGLQ- 61

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V YVRNITD+    DD      + +  +         +  K T  +      L  L P+
Sbjct: 62  -VRYVRNITDVGHLTDDADEGEDKIQKRAKLERLEPMEVAEKYTWAYFDAMDDLNVLRPS 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PRA  HIP+ I L Q +I  GHAYE N  + F  SS P YG  S R  +EQ+ G RV 
Sbjct: 121 ISPRAAGHIPEQIELTQALIEKGHAYEKNGSVYFRVSSWPEYGKLSGRNFEEQEAGARVA 180

Query: 181 EKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +  K++P DF LWK + P     W SPWG+G PGWHIECSAMS  YLG+ FDIHGGG+D
Sbjct: 181 VREEKEDPRDFALWKAADPEHIMRWNSPWGQGFPGWHIECSAMSLKYLGEGFDIHGGGID 240

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHE EIAQ+  A      A  W+H+  + L G KM+KS GN + + +LL   +   
Sbjct: 241 LQFPHHECEIAQAEAA--GHAFARYWVHHNHVLLNGEKMAKSTGNLVILRDLLNQNE--- 295

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQT 340
                 V+R  +L +HYR  +DFT   L  A     +                       
Sbjct: 296 ----PMVVRFYLLQSHYRSVLDFTSAGLEAARNGYLRLLGAYREVRRQLHAAKPGKHAAL 351

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNASAH 390
             +   ++     AL +DLNT  AI A         K                +F     
Sbjct: 352 EKALDTLEADFSQALNDDLNTPQAIAAFFVFLPALNKALADKAGKDSLERAEKVFAELGE 411

Query: 391 -ILGI---EVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            +LG+    V +  L    +   I+ L+  R    + K F+ +D+IR +L   G ++ED 
Sbjct: 412 GVLGLFPARVLEARLGGALLDGLIQLLLDLRERARQEKNFALSDWIRHRLSELGVVVEDT 471

Query: 446 KNPDNGQ 452
           K     +
Sbjct: 472 KEGPKWR 478


>gi|295135612|ref|YP_003586288.1| cysteinyl-tRNA synthetase [Zunongwangia profunda SM-A87]
 gi|294983627|gb|ADF54092.1| cysteinyl-tRNA synthetase [Zunongwangia profunda SM-A87]
          Length = 494

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 162/488 (33%), Positives = 242/488 (49%), Gaps = 42/488 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++KIYN++  +   F+ I+ S + MYVCGPTVY   H+GN R  I FD+++R L++  
Sbjct: 6   EQQLKIYNSISGEKEVFKPINDSYVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D      R    +         +  K T  F     +   L
Sbjct: 66  YK--VRYVRNITDAGHLENDAETGEDRIAKKARLEQIEPMEVVQKYTVDFHNILEKFNNL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ II  G AYEAN  + FD        +YG  S R I++  
Sbjct: 124 PPSIEPTATGHIVEQIEIIKTIIDRGFAYEANGSVYFDVLKYNEEKHYGKLSGRAIEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K+NP DF LWK++ P     W SPW  G PGWH+EC+ MS+ YLG+ FD
Sbjct: 184 ANTRELAAQSDKRNPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKYLGEEFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ   A   +   + W+H   L L G+KM+KS GN I   EL 
Sbjct: 244 IHGGGMDLKFPHHECEIAQGEAATGKDP-VHYWMHANMLTLNGKKMAKSTGNNILPEELF 302

Query: 293 ETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-- 349
             K +  G+++   V R  ML  HYR  +DF+ + L+ +E   ++  +   S   +    
Sbjct: 303 SGKNEVIGKAFSPNVARFFMLQAHYRSILDFSKEALSASEKGFNRLIEAYASIDDLPESS 362

Query: 350 -----------AVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIF- 385
                      +   A+ +D N+   I  L    +                  +L  +  
Sbjct: 363 ASTINLAEWKQSCYDAMNDDFNSPILIAKLFDAVKWINAIKEESLKISAEDKLELKQVLH 422

Query: 386 NASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +    ILG+   ++ L+ N   +S A+E L++ R      + F+++D IR QL+  G  L
Sbjct: 423 DFLFDILGLRDGEKSLDNNSDKLSGAVELLIKLRAEARNNRDFATSDKIRDQLQEMGIQL 482

Query: 443 EDYKNPDN 450
           +D K+   
Sbjct: 483 KDGKDGTT 490


>gi|126462148|ref|YP_001043262.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|187630855|sp|A3PJH4|SYC_RHOS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126103812|gb|ABN76490.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 486

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 206/483 (42%), Positives = 275/483 (56%), Gaps = 41/483 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I++ NT  R+   F+ ID  N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YG
Sbjct: 2   TEIRLTNTKTRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           E  VTYVRN TD+DDKI   A   +       +   I   T +  + + +D   L  L P
Sbjct: 62  ESHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           TH+PRAT  I  MI +I+++I  GHAYE    ++F   S  +YG+ S R +D+   G RV
Sbjct: 122 THEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG+D
Sbjct: 182 EVAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGATFDIHAGGID 241

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQSCCA      A +W+HN  L ++GRKMSKS GNF TI++L +      
Sbjct: 242 LQFPHHENEIAQSCCAHPEGGFAKVWMHNEMLLVDGRKMSKSLGNFFTIHDLRKD----- 296

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALY 356
           R  P  VIR+ +L THY +P+D+T ++  +A+  L KW + +      G  D AVL+AL 
Sbjct: 297 RGIPGEVIRMVLLGTHYSKPMDWTAEKAAQAKATLWKWRKLTADVEPAGSPDAAVLAALA 356

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI---EVCKEHLNKNISIA----- 408
           +DLNT +AI  LH +A       +   +  ASA +LG+   ++    L   I+ A     
Sbjct: 357 DDLNTPAAITRLHSIA-----AQEDGALLKASASLLGLLEDDLRGWTLPPAIATASNVIE 411

Query: 409 -----------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                            IE+L+ ER      K F  +D IR  L   G I++D       
Sbjct: 412 VSGSATAIVGTVPYRKTIERLLDERKQARLGKDFKRSDAIRDLLVGAGVIIKDTPAGAEW 471

Query: 452 QRM 454
              
Sbjct: 472 DLG 474


>gi|304383413|ref|ZP_07365879.1| cysteine--tRNA ligase [Prevotella marshii DSM 16973]
 gi|304335581|gb|EFM01845.1| cysteine--tRNA ligase [Prevotella marshii DSM 16973]
          Length = 499

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 175/508 (34%), Positives = 248/508 (48%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++ +YNTL RK  EF  +   N+ MYVCGPTVY   H+G+ARP I FDVL+R LR+ 
Sbjct: 4   MQQRLFVYNTLTRKKEEFVPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVLFRYLRHI 63

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I    T ++   
Sbjct: 64  GYK--VRYVRNITDVGHLEHDADDGDDKITKKARLEQLEPM------EIAQLYTNRYHDA 115

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE++  I FD         YG  S 
Sbjct: 116 MRALNVLPPSIEPHATGHIIEQEELVKQIMSNGYAYESHGSIYFDIEKYNKDHRYGILSG 175

Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R +D+    +R  +    K N  DF LWKR+ P     W SPWG G PGWH EC+AM   
Sbjct: 176 RNLDDVINNSRELDGVGEKHNQVDFALWKRAHPEHIMRWPSPWGDGFPGWHCECTAMGRK 235

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + ++G+KM KS GNF
Sbjct: 236 YLGNHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITVDGKKMGKSLGNF 294

Query: 286 ITINE-LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +  + T     +++    IR  +L  HYR  +DF+   L  +E  L +        
Sbjct: 295 ITLEQFFIGTHPLLKQAFSPMTIRFFILSAHYRGTVDFSNDALAASEKGLERLMNGLDDL 354

Query: 345 GIIDPA-----------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
             I PA                    AL +DL T + I  L +  R      D     NA
Sbjct: 355 DRIQPAPSTDETTAQTVATLRKRCYDALNDDLQTPTVISHLFEACRIINTVLDHKGSINA 414

Query: 388 SA-------------HILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
           +               +LG++  K   N     A    ++ ++  R      K +S++D 
Sbjct: 415 ADLQELKDTMHLFAFDLLGLKSEKNANNDAREAAYGKVVDMVLDLRAKAKADKDWSTSDR 474

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR +L   GF ++D K+         WK
Sbjct: 475 IRDELAKDGFEVKDTKD------GVTWK 496


>gi|281422306|ref|ZP_06253305.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
 gi|281403627|gb|EFB34307.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
          Length = 496

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 165/508 (32%), Positives = 240/508 (47%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ IYNTL R    F  +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQKLLIYNTLTRTKERFTPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I    T ++   
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQYYTNRYHDA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P AT HI +   L+Q I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEKLVQEILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172

Query: 168 RKIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R ++     +R       KKN ADF LWK+++P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLENVINESRELAGIGEKKNQADFALWKKASPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGSHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +          +++    IR  +L  HYR  +DF+   L  ++  L +        
Sbjct: 292 ITLEQFFTGNHDSLEQAYSPMTIRFFILSAHYRSTVDFSNDALKASQKGLERLMNGLNDL 351

Query: 345 GIIDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKN 378
             +  A                    A+ +D  T   I  L +           + +   
Sbjct: 352 ERVPVAKQSDEQVKKFVSELRQRCYDAMNDDFQTQLVISYLFEACHVINTALDHKANISA 411

Query: 379 HDLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
            DL  + +        +LG++  K   N     A    ++ ++  R      K ++++D 
Sbjct: 412 EDLKELSDTMHLFTFDLLGLKSEKGANNDAREEAYGKVVDMVLNLRAKAKADKDWATSDQ 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR  L   GF ++D K+         WK
Sbjct: 472 IRDALAEAGFEVKDTKD------GVTWK 493


>gi|157413680|ref|YP_001484546.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|187629843|sp|A8G5S9|SYC_PROM2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157388255|gb|ABV50960.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 489

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 181/510 (35%), Positives = 255/510 (50%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  IV+D+L R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIVWDILRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E        ++  ++ KN  +F KD   L  + P   P+
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEES------SSMKEVSEKNIIEFHKDMDSLGIMRPDSMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMAND 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+++      
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRELIKS------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
                 +R  ++  +YR+P+DFT + L  A           +   +   A          
Sbjct: 286 GISPMSLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKGAFRYIDKNESI 345

Query: 353 --------------------SALYNDLNTVSAIQALHKLAR-----------------ES 375
                                AL NDLNT  AI  ++ LA+                 + 
Sbjct: 346 EEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKIDL 405

Query: 376 TKNHDLLPIFN---ASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSAD 429
            +   L+  F        +LG+E  KE L   +K     I  L+ ERL   K K ++ AD
Sbjct: 406 NEKFFLIENFKTLEKLTKVLGLE--KEVLVKESKITEEEISSLINERLKAKKGKNYAKAD 463

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  L  KG  L D       + +T W +
Sbjct: 464 EIRNLLNEKGIELID-----QSKEITTWIR 488


>gi|126465424|ref|YP_001040533.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|166225308|sp|A3DLW5|SYC_STAMF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126014247|gb|ABN69625.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 477

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 178/498 (35%), Positives = 237/498 (47%), Gaps = 64/498 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            IKIYNTL RKI EF+ + P  ++MYVCGPTVYD+ HIG+ R  +V+D L R L      
Sbjct: 3   GIKIYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKRYLALRGY- 61

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +V NITDIDDKII RA QE            I    T+ +++   +L        P
Sbjct: 62  -HVLHVMNITDIDDKIINRAHQEK------RDWREIAETYTRDYLESLGKLNVK-VDLHP 113

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T HI ++I  IQ +I  G+AY A +  + F+    P YG  S R  +++         
Sbjct: 114 RVTEHIKEIIEFIQILIDKGYAYVAPSGSVYFEVDKYPEYGELSGR-TNKELWSQEKEFI 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK P DF LWK   P EP W++PWG+GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 SEKKKPYDFALWKAWKPGEPHWDAPWGKGRPGWHIECSVMSSRYLGRQFDIHGGGTDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS  A  ++     W+H G + +   KMSKS GN I + E         + W
Sbjct: 233 PHHENERAQSEAAFGVKPWVKYWVHTGMVMMGSEKMSKSLGNIIPLREAF-------KEW 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
               +RL  L +HYR P+ FT + + +A+    +    + +                   
Sbjct: 286 GPETLRLWYLTSHYRRPLVFTEESIRQAQKYYERLVSVTNTIKKLSREAVSLHRMNDEDL 345

Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTK-------------NHDLLPIF 385
                   I      AL ND NT  A+  + +      K              + LL  F
Sbjct: 346 KILEKLLEIRSRFHEALSNDFNTPQALAVISEFMTLVFKEIQYNPKYMLVLTAYKLLREF 405

Query: 386 NASAHILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           N    +L   +    E L   +   I  +V  R  L + K +  AD IR +L   G IL 
Sbjct: 406 NTVLGVLDKYLVETPEELETLLDNVINIVVDIRRELRERKLYDLADRIRSELGKHGIILM 465

Query: 444 DYKNPDNGQRMTRW-KQK 460
           D        + T W ++K
Sbjct: 466 DR------GKETTWMRRK 477


>gi|282601150|ref|ZP_05980914.2| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282570019|gb|EFB75554.1| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 464

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 177/476 (37%), Positives = 250/476 (52%), Gaps = 50/476 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NT+ R+  EF        R+YVCGPTVY++ HIGNARPMIVFD L R L Y     
Sbjct: 1   MQIFNTMTRQKEEFVPQKEGEYRIYVCGPTVYNYIHIGNARPMIVFDTLRRYLEYCG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDK+I++ +QE        ++  +  K   +++KD+  L    PT +PR
Sbjct: 59  KVYYVSNITDIDDKLIQKGQQE------GISMQEVARKFEAEYIKDSEGLNVEEPTVRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--- 180
           AT HI ++I ++++++  GHAY A N ++ F   S P YG  S   +D+ + G R     
Sbjct: 113 ATEHIGEIIKIVKDLVDSGHAYVARNGDVYFRVKSDPGYGKLSHLNLDDLESGNRTLRSQ 172

Query: 181 -EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +   K++PADF +WK + P EP WESPWG GRPGWHIECSAM+  +LG   D+H GG D
Sbjct: 173 MDDDLKEDPADFAVWKAAKPGEPYWESPWGHGRPGWHIECSAMARKHLGNTIDLHAGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS CA+     +  W+HNGFLN+   KMSKS GNF T+ E+ E      
Sbjct: 233 LIFPHHENEIAQSECANGC-TFSRYWMHNGFLNINNEKMSKSAGNFFTVREIAE------ 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------QTS 341
             +    IR  ML   YR P+++TV  +   +  L +                      +
Sbjct: 286 -KYGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRDNLDFAIEHAHGTDTALA 344

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHIL 392
                      +A+ +DLNT  A+ A+    +E     D             F+    +L
Sbjct: 345 AKCEEARTKFKTAMDDDLNTPDALAAVFDFVKEINTLSDASDKATLELAAKTFDELTGVL 404

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           G+   ++     +   +  LV+ER    K K ++ AD IR QL   G+ + D    
Sbjct: 405 GLLYNRKK--DEVPADVTALVEERAAAKKAKDWAKADAIRAQLTEMGWSVTDTAQG 458


>gi|182437812|ref|YP_001825531.1| cysteinyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|229558792|sp|B1VS94|SYC_STRGG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|178466328|dbj|BAG20848.1| putative cysteinyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 466

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 160/484 (33%), Positives = 251/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKSAEQ------GRPWWSIGYENERAFNDGYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI +++ +I  GHAYEA+  + FD  S+P Y + S +++D+ +  +    +
Sbjct: 113 PRATGHIPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLTLSNQELDDLRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIF
Sbjct: 172 TGKRDQRDFAMWKATKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HNG++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQATAY--GDEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++             +       + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKTGEVVPPADEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+  DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAADRLAEVRAMLGVLGLDPLDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++ +R      K +++AD IR QL   G ++ED        
Sbjct: 403 GEGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIEDSPAGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|188995669|ref|YP_001929921.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
 gi|188595349|dbj|BAG34324.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
          Length = 486

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 161/487 (33%), Positives = 234/487 (48%), Gaps = 42/487 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL RK   F+ I   ++ +YVCGPTVY  AH+G+ARP I FD+LYR LR+   + 
Sbjct: 1   MEIYNTLHRKKERFEPIHEPHVGLYVCGPTVYGDAHLGHARPAITFDLLYRYLRHLGYQ- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLAPT 120
            V YVRNITD+     +    E                +      ++      L  L P+
Sbjct: 60  -VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLEPMEVVQYYLTRYRHAMEVLNVLPPS 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGT 177
            +P A+ HI + I L++ I+  G+AYE+   + FD         YG  S R I+E    T
Sbjct: 119 IEPMASGHIIEQIELVKQILKAGYAYESCGSVYFDVEKYNQDHRYGVLSGRNIEEMINNT 178

Query: 178 R-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           R +  +  K+N  DF LWK + P     W SPWG G PGWH EC+AM   YLG+ FDIHG
Sbjct: 179 RRLDGQDEKRNGVDFALWKAAQPEHIMRWPSPWGMGFPGWHCECTAMGRKYLGEEFDIHG 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL+FPHHE EIAQ+  A +       W+HN  + + G+KM KS GNFIT+ E     
Sbjct: 239 GGMDLVFPHHECEIAQA-VASQGHPIVRYWMHNNMITINGQKMGKSLGNFITLEEFFSGA 297

Query: 296 KFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------ 342
                +++    IR  +L  HYR  +DF+ + L  AE  L +    +             
Sbjct: 298 HPSLNKAYSPMTIRFFILGAHYRGTVDFSNEALEAAEKGLERLLDAAALLDGLKTADTTS 357

Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------------DLLPIFNASA 389
              G +      A+ +DLN+   I AL   AR     H            +L   F    
Sbjct: 358 VEVGDLRKRCYDAMNDDLNSPMVIAALFDAARAINAVHNGQGTITPSDLEELRTTFRLFL 417

Query: 390 -HILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             +LG+          ++    A++ L+  R      K ++++D IR +L + GF ++D 
Sbjct: 418 FDLLGMCDERASSAGGSEAFGKAMDLLLSIRAEAKARKDWATSDKIRDELTALGFTIKDT 477

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 478 KDGAEWK 484


>gi|307719502|ref|YP_003875034.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
           6192]
 gi|306533227|gb|ADN02761.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
           6192]
          Length = 702

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 156/482 (32%), Positives = 230/482 (47%), Gaps = 38/482 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++NT+ R    F   +   + MY CGPTVY++AHIGN R  I  DVL R L +   
Sbjct: 233 MELRLFNTMGRIQEPFVPREAGKVGMYTCGPTVYNYAHIGNLRTYIFEDVLRRTLLHAGY 292

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
              + +V N+TD+     +    E   I        ++  I    T+ F +DT +L    
Sbjct: 293 --RLVHVMNVTDVGHLTSDGDEGEDKVIKAARERGMSVWEIAEFFTRAFFEDTDKLNIQR 350

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P    +AT HIP+MI L++ +   GH Y A   + +D S+ P YG  +R    + + G R
Sbjct: 351 PEIVCKATEHIPEMIDLVKRLEERGHTYLAGGNVYYDISTFPRYGELARLDEQDLRAGAR 410

Query: 179 VPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V    HK++P DF+LW   +  E     W+SPWGRG PGWH+ECSAMS  YLG+ FDIH 
Sbjct: 411 VGVDAHKRSPRDFVLWFTRSKFEHQAMVWDSPWGRGYPGWHLECSAMSMKYLGEQFDIHC 470

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQS  A         W+H  FL ++  KMSKS GNF+T++      
Sbjct: 471 GGVDHIPVHHTNEIAQSEGATGKHPWVRYWLHAEFLVMDSGKMSKSKGNFLTLS------ 524

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------------LSKWPQTST 342
                 +     R   L  HYR  + F+ + L  A                   W QT  
Sbjct: 525 GLEEEGFHPLDYRYFCLGAHYRSQLFFSWEALEAARNARRNLIEHLSGLHPRDGWEQTRL 584

Query: 343 SK--GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHILGIEVCKE 399
           S+           A+ +DL T  A+  L +  ++     +   +       ILG+ + + 
Sbjct: 585 SERGEAYMREFEEAIGDDLATPRALAVLWRALKDEALPPEERAVLAVTMDRILGLSLAEA 644

Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +   + +LV+ R  L K + F+ AD IR +L  +G I+ED        +  RWK
Sbjct: 645 IASDDALEPELLELVRRREALRKQRNFAEADRIRDELARRGIIVEDT------PQGPRWK 698

Query: 459 QK 460
           +K
Sbjct: 699 RK 700


>gi|226304178|ref|YP_002764136.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229494513|ref|ZP_04388276.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|226183293|dbj|BAH31397.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|229318875|gb|EEN84733.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 464

 Score =  506 bits (1303), Expect = e-141,   Method: Composition-based stats.
 Identities = 152/477 (31%), Positives = 228/477 (47%), Gaps = 47/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L  +  
Sbjct: 1   MTLRLYDTGTRALRDFVPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWLLAHG- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN+TDIDDKI+ +A                 +   + F     +L  L P+ +
Sbjct: 60  -NDVAFVRNVTDIDDKILNKAAG------AGRPWWEWAATFERSFTWAYDQLGVLPPSIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ QM+ +++ +I +GHAY A  ++ FD  S P YG+ S  K+D+   G    E 
Sbjct: 113 PRATGHVTQMVEMMERLIENGHAYAAGGDVYFDVQSYPEYGALSGHKLDDVHQGESAAE- 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK   P EP W +PWG GRPGWH+ECSAM+  YLG  FDIH GG DL+F
Sbjct: 172 -GKRDPRDFTLWKAVKPGEPSWPTPWGPGRPGWHLECSAMAEFYLGAAFDIHCGGRDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+ CA   +  A  W+HNG++ + G KMSKS GN +++  +L       +  
Sbjct: 231 PHHENEIAQAKCA--GDDFAQYWLHNGWVTMSGEKMSKSLGNVLSVPNVL-------KKV 281

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLS 353
               +R  +   HYR  ++++ + L E+                       G       +
Sbjct: 282 RPQELRYYLGSAHYRSNLEYSDEALDESAKSYQGLESFVLRTHKRAGGVELGTWTEGFAA 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN-- 402
           AL NDL+   A+  +H  A E                     A   ILG++   EH    
Sbjct: 342 ALDNDLSVPIALAEIHGKASEGNSALAAGDLDAARVAAGQVRAMLAILGVDPLDEHWTQS 401

Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                   + + + +   +  R      K ++ AD +R +L   G  + D  +    
Sbjct: 402 GGDTETAMEALDVLVRADLDRRQQARTEKNWAVADEVRDRLIKAGIEVTDTPDGPEW 458


>gi|91070080|gb|ABE11005.1| cysteinyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
           ASNC612]
          Length = 489

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 183/510 (35%), Positives = 255/510 (50%), Gaps = 78/510 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NTL +++  F+ ID   +++Y CG TVYD  H+G+AR  I +DVL R L   Y + 
Sbjct: 2   IKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSDF 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TDIDDKI++RA++E        ++  ++ KN  +F KD   L  + P   PR
Sbjct: 59  KVKYVQNFTDIDDKILKRAKEES------SSMKEVSEKNIIEFHKDMDSLGIMRPDSMPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           ATNHI  +   I  +   G+AY  + ++ +      NYG  S + I EQ +  +      
Sbjct: 113 ATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMANN 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K NP DF LWK++   EP ++SPWG+GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 173 ENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQS  A+  +K AN W+HNG +N+ G+KMSKS  NF TI EL+++      
Sbjct: 233 IFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
                 +R  ++  +YR+P+DFT + L  A           +   +   A          
Sbjct: 286 GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINVALSFMDLTKGAFRFINKNESI 345

Query: 353 --------------------SALYNDLNTVSAIQALHKLAR-----------------ES 375
                                AL NDLNT  AI  ++ LA+                 + 
Sbjct: 346 EEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKIDL 405

Query: 376 TKNHDLLPIFN---ASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSAD 429
            +   LL  F        +LG++  KE L   +K     I  L+ ERL   K K ++ AD
Sbjct: 406 NEKFFLLENFKTLEKLTEVLGLK--KEVLVKESKITEEEISMLINERLKAKKEKNYTKAD 463

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  LE KG  L D       + +T W +
Sbjct: 464 EIRNLLEEKGIELID-----QSKAITTWIR 488


>gi|120437076|ref|YP_862762.1| cysteinyl-tRNA synthetase [Gramella forsetii KT0803]
 gi|187629825|sp|A0M500|SYC_GRAFK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117579226|emb|CAL67695.1| cysteinyl-tRNA synthetase [Gramella forsetii KT0803]
          Length = 494

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 157/488 (32%), Positives = 233/488 (47%), Gaps = 42/488 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +K+YN++  +   F  I+  N+ MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   EQSLKLYNSMSGEKETFTPINEGNVGMYVCGPTVYSNVHLGNCRTFMSFDLVFRYLKHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D      R    +         +  K T  F     +    
Sbjct: 66  YK--VRYVRNITDAGHLENDADSGEDRIAKKARLEQIEPMEVVQKYTVDFHNILNKFNNY 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ I+ +G AYEAN  + FD        +YG  S R I++  
Sbjct: 124 PPSIEPTATGHIVEQIEIIKTILDNGFAYEANGSVYFDVVKFNKEHSYGKLSGRAIEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K++P DF LWK++ P     W SPW  G PGWH+EC+ MS+ YLG+ FD
Sbjct: 184 ANTRELSAQSDKRSPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKYLGEEFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ   A       N W+H   L L G+KM+KS GNFI   ++ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQGEAATGKSP-VNYWLHANMLTLNGKKMAKSTGNFILPEQIF 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
               +   +++   V+R  +L  HYR  +DF+   L  +E   ++      S   +    
Sbjct: 303 TGNNEVLTKAFSPNVVRFFVLQAHYRSILDFSSDALLGSEKGFNRLMDAYRSIEELPASD 362

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNA--- 387
                      +   A+ +D N+   I  L    +      D            F A   
Sbjct: 363 KSDFNLSEWKQSCYDAMNDDFNSPILIAKLFDAVKTINGIKDGSIQITDTDKEEFKATMS 422

Query: 388 --SAHILG-IEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                ILG I+   E+ N+   +A  IE L++ R      K F+ +D IR +L+  G  L
Sbjct: 423 AFMFDILGLIDAASENKNEGDKLAGTIELLIKLRADARNNKDFALSDQIRDRLQEIGIQL 482

Query: 443 EDYKNPDN 450
           +D K   +
Sbjct: 483 KDGKEGTS 490


>gi|163857764|ref|YP_001632062.1| cysteinyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|163261492|emb|CAP43794.1| cysS [Bordetella petrii]
          Length = 516

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 170/500 (34%), Positives = 241/500 (48%), Gaps = 61/500 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+   P  +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR    + 
Sbjct: 32  LHIYNTLSRTKEPFKPAQPGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGLK- 90

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 91  -VDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 143

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +  +G AY A+  ++ +       YG  S + +D+ + G RV    
Sbjct: 144 ATQYVGEMLDIIGRLEQNGLAYRADDGDVNYAVRGFDGYGKLSGKALDDLRAGERVAVGS 203

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    W+SP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 204 AKRDPLDFVLWKAAKADEPDDTKWQSPYGLGRPGWHIECSAMSRALLGLPLDIHGGGPDL 263

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------E 293
            FPHHENEIAQ+  A      AN W+H G L ++  KMSKS GNF TI + +       +
Sbjct: 264 KFPHHENEIAQTEGAFGG-VLANTWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGEAPAD 322

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
             ++      A ++R  ++  HYR P ++T   L +A+  L +  Q   +    D     
Sbjct: 323 QAEYAVNPREAEMLRFFIVRNHYRSPQNYTPHNLADAQSALDRLYQALLNVAPDDAGLDW 382

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------------- 383
                 A  +A+ +D NT  A+ AL +LA E+ +                          
Sbjct: 383 NEPQAQAFKAAMDDDFNTSGAVAALFELASEANRTRSARSAGQLKSLAALLGLLQQDPAR 442

Query: 384 ----IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                   SA   G+           +  IE L+  R    + + ++ AD IR QL   G
Sbjct: 443 YFQCATRYSAA--GLAQAATPSASLDAGQIETLIAARAAAKQARDYAEADRIRAQLREAG 500

Query: 440 FILEDYKNPDNGQRMTRWKQ 459
             L+D          T+W++
Sbjct: 501 IELDDKPGGQ-----TQWRR 515


>gi|84488953|ref|YP_447185.1| hypothetical protein Msp_0124 [Methanosphaera stadtmanae DSM 3091]
 gi|84372272|gb|ABC56542.1| CysS [Methanosphaera stadtmanae DSM 3091]
          Length = 456

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 171/472 (36%), Positives = 248/472 (52%), Gaps = 50/472 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+Y+T+ R+  E + +  + I+++VCGPTVYD++HIG+AR  I FDV+ R L++     
Sbjct: 2   IKVYSTMTRQKEELK-VTNNKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKHEGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII+RA++       N+    ++ +  ++++KD   L         R
Sbjct: 59  SVFYLQNITDIDDKIIKRAKEN------NEDPLELSHRFEKEYLKDMETLNVSNVNFYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ ++I  IQ++I  G+AY+    + FD S   ++G  S R +D+ +  TR+     
Sbjct: 113 ATEHMNEIINQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDDLQ-NTRIQIDST 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK+    +P WESPWG GRPGWHIE +A++  Y G  +DIHGGGLDLIFPH
Sbjct: 172 KKDPKDFALWKK-QDEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+ EIAQ   +   E     W+H GFLN+ G KMSKS GNFITI ELLE           
Sbjct: 231 HDAEIAQMEASSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIV-------TP 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------STSKG 345
            V R  +L THYR PIDF+   L +AE  L +   T                        
Sbjct: 284 EVYRFFVLSTHYRSPIDFSEDTLKQAENSLKRIQNTGKIIIDKLTEDNLPEGKVLDEDLE 343

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGI 394
           +      +A+ ND NT  A+  L     +  K            ++++  F     ILG 
Sbjct: 344 LFKEEFFNAMNNDFNTPIALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESILGF 403

Query: 395 E--VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +  V  + ++      +  + + R  L   K +  AD IR +L +    LED
Sbjct: 404 DIIVEDDMVSDVSGDLLNIITEIREDLRSKKDWDLADKIRDELANLDITLED 455


>gi|124022576|ref|YP_001016883.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123962862|gb|ABM77618.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 511

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 173/509 (33%), Positives = 243/509 (47%), Gaps = 76/509 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +   +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL R L + 
Sbjct: 11  LPVSLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWR 70

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VT+V+N TDIDDKI++RA ++        ++  I+ +N + F +D   L  L P 
Sbjct: 71  GY--SVTFVQNFTDIDDKILKRAAEKK------CSMEHISEQNIEAFHQDMDALGILRPD 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
             PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+      
Sbjct: 123 RMPRATQCLDGIRALIGELETSGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGR 182

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH G
Sbjct: 183 VADAEEARKQHSFDFALWKGAKTGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLG 242

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE+  
Sbjct: 243 GADLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLES-- 299

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQ- 339
                     +RL +L  HYR+P+DFT   +  A                      WP+ 
Sbjct: 300 ----GVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYAEALNWPEC 355

Query: 340 --------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------------ 373
                         T      I    + AL +DLN+  AI  L  LAR            
Sbjct: 356 KPLPQEVMQPAHSSTLEQCSEIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLERG 415

Query: 374 -----ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLIL 419
                + T   +LLP   +    A++LG+E  K      E  N+     I+  +  R   
Sbjct: 416 DTKAIQETAQLNLLPRWQLLVELANVLGLEAEKAAKLAPEGNNRVDENHIQLAIAARKEA 475

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNP 448
              + F+ AD IR +L ++G  L D    
Sbjct: 476 KAARDFAKADRIRDELRAQGIELIDKPGG 504


>gi|302338662|ref|YP_003803868.1| cysteinyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301635847|gb|ADK81274.1| cysteinyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 474

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 160/482 (33%), Positives = 242/482 (50%), Gaps = 39/482 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            KI +YNT+ R++ EF+ I+   ++MY CGPTVY+FAHIGN R  +  DVL R+  Y   
Sbjct: 1   MKILLYNTMGREVQEFKPIEDGLVKMYTCGPTVYNFAHIGNLRTYVFEDVLRRVFEYAGF 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V +V NITD+    DD      + E  S     ++  I    T  F +DT RL  + 
Sbjct: 61  K--VEHVMNITDVGHLTDDADEGEDKMEKSSRESGKSVWEIAKYYTDAFFRDTDRLNIIR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PT  PRAT HI  MI LI+ +   GH Y+A   + F   + P+YG  +     + + G R
Sbjct: 119 PTVAPRATEHIDDMIALIKRLEEGGHTYQAGGNVYFSIDTFPDYGRLALLDRQDLQAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           +    +K+NP DF+LW  ++  E     W+SPWG+G PGWHIECSAMS  YLG+ FDIH 
Sbjct: 179 IEVDSNKRNPHDFVLWFTNSKFENHAMLWDSPWGKGYPGWHIECSAMSIRYLGEQFDIHC 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQ+  A   ++    W+H  FL +   KM+KS GNF+T+  L++  
Sbjct: 239 GGVDHIPVHHTNEIAQAEAATG-KQWVQYWVHGEFLLMNKGKMAKSAGNFLTLQSLVD-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQT 340
               + +     R   L  HYR  + F+ + L  A+    +               W + 
Sbjct: 296 ----KGYHPLDYRYFCLGGHYRSQLQFSFESLDAAKSARERLVSRIAVLREELGDCWKEA 351

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
                S +         +A+  D+N   A+  L +L +   +  + L + +A   +LG+ 
Sbjct: 352 IALPPSAAGSKFLERFEAAVGQDMNMPKALAELWQLLKSELQPGEKLSVVSAMDRVLGLN 411

Query: 396 VC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           +    +   + +    IE+L+++R      K F  AD IR +L ++G  ++D  N     
Sbjct: 412 LLALPQHATDSSEDREIEELIEQRNAARSRKDFHLADEIRDKLSARGISIKDTPNGTKWS 471

Query: 453 RM 454
           R 
Sbjct: 472 RT 473


>gi|297193591|ref|ZP_06910989.1| cysteinyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297151836|gb|EDY62039.2| cysteinyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 464

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 161/483 (33%), Positives = 248/483 (51%), Gaps = 48/483 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFAPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++  +            I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKSADQ------GRPWWSIGYENERAFNDGYEALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ +M+ +++ +I  GHAYEA+  + FD  S P Y + S + ID+ +        
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYEADGSVYFDVRSFPEYLALSNQDIDDLRQ--PDEGV 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG+ FDIHGGGLDLIF
Sbjct: 171 SGKRDPRDFAMWKSTKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEAFDIHGGGLDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A+ W+HN ++ + G KMSKS GN + + E++       ++W
Sbjct: 231 PHHENEIAQAKAY--GDAFASYWVHNAWVTMSGEKMSKSLGNSVLVAEMV-------KNW 281

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVL 352
              V+R  +   HYR  I+++ + L EAE   ++                    +  A  
Sbjct: 282 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGPVAPAAEVPLAFA 341

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK----- 398
            A+ +DL    A+  +H   R+                L    A   +LG++        
Sbjct: 342 EAMDDDLGVPQALAIIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWVG 401

Query: 399 -----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                E L+  +   +  ++Q+R      K +++AD IR QL   G ++ED  +      
Sbjct: 402 EADRGEDLHGVVDTLVRLVLQQRESARSRKDWATADAIRDQLNQSGLVIEDGPDGPRWTL 461

Query: 454 MTR 456
             R
Sbjct: 462 GPR 464


>gi|146278108|ref|YP_001168267.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|187630856|sp|A4WU98|SYC_RHOS5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145556349|gb|ABP70962.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 486

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 202/481 (41%), Positives = 270/481 (56%), Gaps = 41/481 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT  R+   F  IDP+N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YG  
Sbjct: 4   IRLTNTKTRRKEAFTPIDPANVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGPD 63

Query: 65  CVTYVRNITDIDDKI---IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI    +  +       + + I   T +  + + +D   L  L PTH
Sbjct: 64  HVTYVRNFTDVDDKINAAAQARKAAGDPRSLEELIRARTDETIRWYHEDMDALGALRPTH 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT  I  MI +I++++  GHAYE    ++F   S  +YG+ S R +D+   G RV  
Sbjct: 124 EPRATEWIGAMIAMIEDLVARGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVEV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF+LWK S    PGWESPWGRGRPGWHIECSAMS   LG  FDIH GG+DL 
Sbjct: 184 APFKEDPMDFVLWKPSDDELPGWESPWGRGRPGWHIECSAMSYELLGASFDIHAGGIDLQ 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSCCA      AN+W+HN  L + G+KMSKS GNF TI++L +      R 
Sbjct: 244 FPHHENEIAQSCCAHPEGGFANVWMHNEMLLVNGKKMSKSLGNFFTIHDLRKD-----RG 298

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYND 358
            P  VIR+ +L THY +P+D+T ++  +A+  L KW + +         D AVL+AL +D
Sbjct: 299 IPGEVIRMVLLGTHYSKPMDWTAEKAAQAKATLWKWRKLTADVEPAASPDAAVLAALADD 358

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----------------EHL 401
           LNT +AI  LH +A       +   +  ASA +LG+                     E  
Sbjct: 359 LNTPAAITRLHSIA-----AQEDGALLKASASLLGLLEDDLRGWTLPPVTGTGSGVMEVS 413

Query: 402 NKNIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               +          IE+L+ ER      K F  +D IR  L   G I++D         
Sbjct: 414 GSATAIVGSVQYRETIERLLDERKQARMGKDFKRSDAIRDLLVGAGVIIKDTPAGAEWDL 473

Query: 454 M 454
            
Sbjct: 474 G 474


>gi|197122993|ref|YP_002134944.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|229558614|sp|B4UGC3|SYC_ANASK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|196172842|gb|ACG73815.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 481

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 174/502 (34%), Positives = 249/502 (49%), Gaps = 65/502 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++TL  +  E   ++P  +R+YVCGPTVYD++H+G+AR  +V+DV+ R LR    
Sbjct: 1   MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN TD+DDKII+RA +        +    + S+    F +D   L  L P  +
Sbjct: 61  E--VRFVRNFTDVDDKIIQRANER------GEDPIALASRFADAFHEDMDALGNLRPDVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR + HIP+++ LI  ++  G AY   N ++ +     P YG  S+R +D+   G RV  
Sbjct: 113 PRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEP 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP WESPWG+GRPGWHIECSAM+  +LG   D+H GG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLV 232

Query: 242 FPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           FPHH NEIAQS  A       E  A  W+HNGF+ ++  KMSKS GNF TI ++L     
Sbjct: 233 FPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLAR--- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
               +    +R  +L THYR   +F+ Q L EAE  LS   +T      +          
Sbjct: 290 ----FDGEALRFFLLGTHYRRDFNFSDQVLAEAERRLSALYETVEKAERLGAGAAPAAEP 345

Query: 349 ---PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF----NASAH 390
                  +AL +D NT   +  + +   E+    D            L  F     A   
Sbjct: 346 AFVERARAALDDDFNTPQVLGIVAEAFTEANALADRKGKKSPEEKARLAAFARGARAVGA 405

Query: 391 ILGIE------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +LGI                          +E+ + ER      K F+ +D IR  L ++
Sbjct: 406 VLGILDRPPAQALSAIRDRAAARRGIDGGEVERSIAERAAARAAKDFARSDAIRDALLAR 465

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G +L D      G + T WK +
Sbjct: 466 GVVLMD------GPQGTTWKVE 481


>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
 gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
          Length = 532

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 177/524 (33%), Positives = 264/524 (50%), Gaps = 89/524 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +++K+YN++ ++   F++  P  + MYVCG T YDF+H+G+AR  + FD+L+R L++  
Sbjct: 4   NEELKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQHLG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VTYVRN TDIDDKII RA +      I +    ++S+  ++++ D T L CL PTH
Sbjct: 64  YE--VTYVRNFTDIDDKIIRRANE------IGEDPLSLSSRFCEEYLVDMTDLQCLIPTH 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR T+H+ Q+  +I  II    AY    ++ F  +  PNYG  S ++++  + G RV  
Sbjct: 116 QPRVTDHVEQIKDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAV 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+ YL   FDIHGGG+DLI
Sbjct: 176 DSRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSC A   E + + W+HNG +     KMSKS GNF TI ++ E        
Sbjct: 236 FPHHENEIAQSCAA-CEESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER------- 287

Query: 302 WPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQTSTSKGI- 346
           +    +R  ++  HYR P++++               Q L + E  L  + + S  +G  
Sbjct: 288 YHPLALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAG 347

Query: 347 ------------------IDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNH-------- 379
                             +     + + +DLNT   +  A  +  +    +         
Sbjct: 348 QNANLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQ 407

Query: 380 ------------DLLPIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQ 414
                       ++         ILG+       EV ++   K +         +  L++
Sbjct: 408 KKQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIE 467

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +R +  K + F  +D IR  L ++G  L D        + T W+
Sbjct: 468 DRAVARKSQDFKKSDQIRTDLSARGIALMDV------GKETVWR 505


>gi|220917782|ref|YP_002493086.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254765172|sp|B8JDH1|SYC_ANAD2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219955636|gb|ACL66020.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 481

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 174/502 (34%), Positives = 249/502 (49%), Gaps = 65/502 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++TL  +  E   ++P  +R+YVCGPTVYD++H+G+AR  +V+DV+ R LR    
Sbjct: 1   MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN TD+DDKII+RA +        +    + S+    F +D   L  L P  +
Sbjct: 61  E--VRFVRNFTDVDDKIIQRANER------GEDPIALASRFADAFHEDMDALGNLRPDVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR + HIP+++ LI  ++  G AY   N ++ +     P YG  S+R +D+   G RV  
Sbjct: 113 PRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEP 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP WESPWG+GRPGWHIECSAM+  +LG   D+H GG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLV 232

Query: 242 FPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           FPHH NEIAQS  A       E  A  W+HNGF+ ++  KMSKS GNF TI ++L     
Sbjct: 233 FPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLAR--- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
               +    +R  +L THYR   +F+ Q L EAE  LS   +T      +          
Sbjct: 290 ----FDGEALRFFLLGTHYRRDFNFSDQVLAEAERRLSALYETVEKAERLGAGAAPAAEP 345

Query: 349 ---PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF----NASAH 390
                  +AL +D NT   +  + +   E+    D            L  F     A   
Sbjct: 346 AFVERARAALDDDFNTPQVLGIVAEAFTEANALADRKGKKSSEEKARLAAFARGARAVGA 405

Query: 391 ILGIE------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           +LGI                          +E+ + ER      K F+ +D IR  L ++
Sbjct: 406 VLGILDRPPAQALTAIRDRAAARRGIDGGEVERSIAERAAARAAKDFARSDAIRDALLAR 465

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G +L D      G + T WK +
Sbjct: 466 GVVLMD------GPQGTTWKVE 481


>gi|297623875|ref|YP_003705309.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165055|gb|ADI14766.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 486

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 167/490 (34%), Positives = 237/490 (48%), Gaps = 50/490 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL R+   F+ I P ++ MY+CGPTVY   H+G+AR  I+FDVL R L Y   
Sbjct: 4   TPLQLYNTLTRRKEPFEPITPGHVGMYLCGPTVYSEPHLGHARGPILFDVLRRYLEYLGL 63

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
              V  V NITD+     +    E   +            I  K    +     +L    
Sbjct: 64  --RVRLVTNITDVGHLTDDADDGEDKLLKRAKLEQLEPMEIADKYFWAYFDAMAKLGVRR 121

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P   PRAT HI + I + Q ++  G AYE    + FD S+   YG  S R +D+   GTR
Sbjct: 122 PDITPRATGHITEQIAMTQTLLERGLAYERGGNVYFDVSAWETYGELSGRNVDDLVEGTR 181

Query: 179 VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +  +  K +P DF LWKR+       W SPWG G PGWHIECS MS+ YLG  FDIHGGG
Sbjct: 182 IATRSDKDDPRDFALWKRAEGGHLMRWPSPWGEGYPGWHIECSVMSTKYLGDAFDIHGGG 241

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDLIFPHHE E+AQ+  A   +  A +W+H   + LEG KM+KS G+F+T+ EL      
Sbjct: 242 LDLIFPHHECELAQAKAA--GKPFARVWLHFNMVTLEGEKMAKSKGHFVTLEELF----- 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIID 348
             R +    +R  +L THYR   DF+   L  +   L +  +   +             D
Sbjct: 295 --RRFDPIAVRFHLLGTHYRSVSDFSEASLRASAQGLRRLREGYAALARAVEDGGDEDAD 352

Query: 349 P-----AVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIF-NASAHIL 392
           P        +A+ +DLNT  A+  L+   RE+                   F +A+  +L
Sbjct: 353 PSPYRERFEAAMNDDLNTAQALAVLYDALRETNAALARGADQATLRAAKRFFDDAAGGVL 412

Query: 393 GIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           GI         +   +S  +E +  +R      + F++AD IR++L + G +LED  +  
Sbjct: 413 GILGGAAETQGDAELVSGLVELISAQRQEARLRRDFATADAIRERLAALGIVLEDTPD-- 470

Query: 450 NGQRMTRWKQ 459
                 RWK+
Sbjct: 471 ----GVRWKR 476


>gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [NC10
           bacterium 'Dutch sediment']
          Length = 530

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 183/538 (34%), Positives = 254/538 (47%), Gaps = 107/538 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL +K   F+   P  +RMY CGPTVYD AHIG+AR  + FDV++R L     + 
Sbjct: 3   LVVYNTLHQKKERFEPAVPGEVRMYACGPTVYDRAHIGHARAALTFDVVWRYLERRGYK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V+YVRN TD+DDKII+RA +      +  +   +  +  + + +D   L    PT +PR
Sbjct: 62  -VSYVRNYTDVDDKIIQRAAE------LGQSRESLVEEQIEAYRRDMDALGLRTPTEEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI +MI +I+ ++  G AY  + ++ F+     +YG  S R +DE + G RV     
Sbjct: 115 ATRHIREMIEIIRTLMAKGVAYSVDGDVYFEVRRSSDYGKLSHRGLDELQAGARVEVDPR 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S P EP WESPWG GRPGWHIECSAMS  YLG+ FDIHGGG DLIFPH
Sbjct: 175 KRDPLDFALWKASRPGEPAWESPWGPGRPGWHIECSAMSMKYLGETFDIHGGGADLIFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA   +  A  WIHNGF+N+   KMSKS GN +TI ELL            
Sbjct: 235 HENEIAQSECATG-KPFARYWIHNGFVNIRAEKMSKSLGNILTIRELLGR-------ISP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEIL----------LSKWPQTSTSKGI-------- 346
              +L +L THYR P++F+   L  A             + ++     SK          
Sbjct: 287 CAFKLFLLGTHYRAPVEFSEDALISATAAAARFHTVLEEVQRFQDVQGSKADRSRMDSLP 346

Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------P 383
                   +     A+ +D NT  A+ AL  L +        +                 
Sbjct: 347 LSGQIREAEQEYTDAMDDDFNTPRALAALFNLTKGVNVALRDVDGAPEPSLVYGLSMAGE 406

Query: 384 IFNASAHILG--IEVCKEHLNKNI------------------------------------ 405
                  +LG   E  +E +++ I                                    
Sbjct: 407 TLRTLGSVLGGLFEGPREVVDRLIMTPSAGTSTSGTAASVLRITGDDYCKAREAVESAMA 466

Query: 406 ------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 + AI  +V  R +    K +++AD IR  L + G +++D  +        RW
Sbjct: 467 SGHTPPTEAIRTIVAYRALCRDRKDWTTADAIRTWLTNLGVVVDDTGD------GVRW 518


>gi|319794160|ref|YP_004155800.1| cysteinyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315596623|gb|ADU37689.1| cysteinyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 458

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 173/471 (36%), Positives = 239/471 (50%), Gaps = 37/471 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R++ EF  + P  +RMYVCG TVYD+ H+G+AR MI FDV+ R L+    
Sbjct: 1   MSLRIYNTLSRELEEFSPLQPGKVRMYVCGMTVYDYCHLGHARSMIAFDVVQRWLKASGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   ++I  +T +      +D   L    PTH+
Sbjct: 61  D--VTYVRNITDIDDKIIRRA------VENGESIRALTDRMIDALHEDADALGIARPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT++IPQM+ +I  +   G AY A N ++ +     P YG  S + IDE   G RV  
Sbjct: 113 PRATDYIPQMLSMIGTLEKKGLAYRAENGDVNYAIRKFPGYGKLSGKSIDELHAGERVAV 172

Query: 182 KYHKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P D +LWK +    P E  W S +G GRPGWHIECSAM+   LG+  DIHGGG 
Sbjct: 173 LDGKDDPLDPVLWKSAKASEPEEVKWASEFGAGRPGWHIECSAMACALLGETLDIHGGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A+  +  +N W+HNGF+  +  KMSKS GNF  I ++L      
Sbjct: 233 DLQFPHHENEIAQSEGAN-DKPLSNYWMHNGFIVTDNEKMSKSLGNFFLIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
            + + A  IR  +L  HYR P++++   L +A   L +           +          
Sbjct: 286 -KKYDAETIRFFVLRAHYRRPLNYSDVHLDDARNSLKRLYTALDLVAPAEVTIDWTDPYA 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEH-----L 401
               +A+  D  T  A+  L  LA E  +        +  A    + I            
Sbjct: 345 ARFKAAMDEDFATPEAVAVLFDLAGEVNRTRSATQAGLLKALGGCVQILQSDPKSFLRAG 404

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 AI+  +  R      K F+ AD IR+ L  +G +L+D     +  
Sbjct: 405 ATLDDAAIQAQIDARAAAKAAKNFAEADRIRQGLLEQGIVLKDSPTGTSWT 455


>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 497

 Score =  504 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 170/498 (34%), Positives = 233/498 (46%), Gaps = 78/498 (15%)

Query: 11  LERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           + RK   F   DP    ++MYVCG TVYD++HIG+AR  + FDVLYR L     +  VTY
Sbjct: 1   MTRKKEIFTPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRQLMRLGYD--VTY 58

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
            RN TDIDDKII+R+ +        +    +T K  + F +D   L CL PT +PRAT  
Sbjct: 59  CRNFTDIDDKIIKRSNES------GETCEALTDKFIEAFHEDMAALGCLRPTLEPRATEC 112

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           +  +I  I+ +I  G+AYE   ++ F   ++P YG+ S R  ++ + G RV     KKNP
Sbjct: 113 VDDIIAFIERLIAKGNAYETEGDVYFSVDTLPAYGALSGRNQEDNRAGERVAVDGRKKNP 172

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
           ADF LWK + P EP W SPWG GRPGWHIECSAM    LG   DIHGGG DL+FPHHENE
Sbjct: 173 ADFALWKTAKPGEPTWTSPWGEGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENE 232

Query: 249 IAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           +AQS  A               W+HNGF+ ++  KMSKS GNF TI E+L+        +
Sbjct: 233 LAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLD-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
              V+R  +L  HYR PI++T + L EA   +    QT                      
Sbjct: 286 HPFVLRFMLLGAHYRAPINYTQRALEEASDRVYYLYQTVHDVRAILRDAAAEEPAKKPVP 345

Query: 344 --------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
                       +  V  AL +D+NT   I  L    +             A   +  ++
Sbjct: 346 LVADALKLASEAEKQVSEALNDDMNTPGVIATLSAPLKSMNDFMTTKAGKKAVGRVGALQ 405

Query: 396 VCKEHLNKNISIA----------------------------IEKLVQERLILLKMKKFSS 427
                +   +                               +   ++ER      K F+ 
Sbjct: 406 SLLSTVEGLMEAVGMPKDEENVILAELRARALHRAGLTEDDLLAKIEERNKARDAKDFAE 465

Query: 428 ADYIRKQLESKGFILEDY 445
           +D +R +L ++G  L D 
Sbjct: 466 SDRLRDELSARGVGLMDG 483


>gi|300727688|ref|ZP_07061075.1| cysteine--tRNA ligase [Prevotella bryantii B14]
 gi|299775052|gb|EFI71657.1| cysteine--tRNA ligase [Prevotella bryantii B14]
          Length = 496

 Score =  504 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 161/502 (32%), Positives = 241/502 (48%), Gaps = 59/502 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+ +   N+ MYVCGPTVY  AH+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQHLLIYNTLTRTKELFKPLHAPNVGMYVCGPTVYGDAHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I    T ++ + 
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQYYTNRYHQA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P AT HI +   L+Q I+ +G+AYE+N  + FD         YG  S 
Sbjct: 113 MDALNVLPPSIEPHATGHIIEQEQLVQQILDNGYAYESNGSVYFDIEKYDKDHKYGILSH 172

Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R + +    +R       KKN  DF LWK++TP     W SPWG G PGWH EC+AM   
Sbjct: 173 RNLTDMINNSRELNGVGEKKNQVDFALWKKATPEHIMRWPSPWGDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+++          +++    IR  +L  HYR  +DF+ + L  A+    +        
Sbjct: 292 ITLDQFFTGNHASLDQAYSPMTIRFFILSAHYRGTVDFSNEALLAAQKGYERLMNAIDDL 351

Query: 345 G-----------------IIDPAVLSALYNDLNTVSAIQALHKLA---------RESTKN 378
                              +      A+ +D  T   I  L +           + +   
Sbjct: 352 SRVQVVATSDEPTAKFVKELRQRCYDAMNDDFMTPLVISYLFEACHLINSILDHKANISA 411

Query: 379 HDLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
            DL  + +        +LG++  K   N     A    ++ ++  R      K ++++D 
Sbjct: 412 DDLKELTDTMHLFTFDLLGLKNEKGANNDAREEAYGKVVDMVLDLRAKAKASKDWATSDQ 471

Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
           IR  L   GF ++D K+    +
Sbjct: 472 IRDMLADAGFEIKDTKDGVAWK 493


>gi|290959417|ref|YP_003490599.1| cysteine--tRNA ligase [Streptomyces scabiei 87.22]
 gi|260648943|emb|CBG72057.1| cysteine--tRNA ligase [Streptomyces scabiei 87.22]
          Length = 467

 Score =  504 bits (1299), Expect = e-141,   Method: Composition-based stats.
 Identities = 164/485 (33%), Positives = 246/485 (50%), Gaps = 49/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKII +A  +            I  +N + F      L CL PT++
Sbjct: 61  D--VTFVRNVTDIDDKIIVKAADQ------GRPWWSIGYENERAFNDGYGVLGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ +M+ +++ +I  GHAYEA+  + FD  S P Y   S +++D   +      +
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYEADGNVYFDVRSFPGYLQLSNQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKSAKPGEPTWETPWGRGRPGWHLECSAMAHKYLGTAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDDFATYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++   L EAE   ++                     + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEAALREAESAFARIEGFVQRVIEKAGGVVEPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL- 401
             A+ +DL    A+  +H   R+                L    A   +LG++    H  
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEEAVARLAEVRAMLGVLGLDPLDAHWA 402

Query: 402 ------NKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                  +++   ++ LV    Q+R      K +++AD IR QL   G  +ED  +    
Sbjct: 403 GAEGDRGEDLHGVVDTLVGLVLQQREAARARKDWATADAIRDQLNQSGLAIEDGPDGPRW 462

Query: 452 QRMTR 456
               R
Sbjct: 463 TLGPR 467


>gi|150401798|ref|YP_001325564.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187631641|sp|A6UWT0|SYC_META3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|150014501|gb|ABR56952.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 479

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 171/501 (34%), Positives = 242/501 (48%), Gaps = 69/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +KIYNT  +    F+ I+    I+MYVCGPTVYD AH+G+ R  + FD++ R L +    
Sbjct: 1   MKIYNTASKNKETFKTINNKKLIKMYVCGPTVYDHAHLGHGRTYVAFDIIRRYLEHKNY- 59

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  + N TDIDDKII RA ++         I  ++ K    F++D  +L        P
Sbjct: 60  -IVQLIINFTDIDDKIINRANEQ------GTTIKELSDKFINSFLEDMEKLNVKPALIYP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R + HI ++I  I+ +   G+AY   + + FDTS    YG   +  I E+    +     
Sbjct: 113 RVSEHINEIIEFIKVLEKKGYAYATADGVYFDTSKYEKYGELRKINIKEE-TSEQKNINI 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +KKN  DF LWK + P EP W+SPWG GRP WHIECSAMS  YLG  FDIHGGG DLIFP
Sbjct: 172 NKKNQRDFALWKFAKPDEPKWDSPWGEGRPAWHIECSAMSLKYLGDNFDIHGGGCDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS C    +K  N WIH GF+ +   KMSKS GNF T+ +L E        + 
Sbjct: 232 HHENEKAQSECYT-DKKWVNYWIHTGFVMVNNEKMSKSLGNFSTLKDLFE-------KYS 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------KGIID-- 348
           A +IR  +L  HY  P+D+T   +  ++  L K   T  +                ID  
Sbjct: 284 AELIRFFLLERHYSSPLDYTEDAINHSKNNLDKLYNTIQNITVAFRNSEIKYKLNEIDKN 343

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLAREST-------------------KNHD 380
                        +A+ ++ NT  A++ + +++                       K+++
Sbjct: 344 TIETIHNCTEKFYTAMDDNFNTAQALKYVFEVSTAINKYINNYANSDELPNYSIILKSYE 403

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESK 438
              +      I G        N NI+    I  L++ R  L K K ++ +D IR +L+  
Sbjct: 404 FFKMVGEIFGIFGSSTINTATNTNIAEENLINILMELRADLKKEKNYNLSDKIRDKLKEM 463

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
             ILED        + T WK+
Sbjct: 464 DIILEDS------PKGTIWKK 478


>gi|303232418|ref|ZP_07319110.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481502|gb|EFL44570.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 508

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 181/528 (34%), Positives = 253/528 (47%), Gaps = 94/528 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+   K  EF   +   +RMYVCGPTVYD  HIGNAR  + FD + R L+Y   E 
Sbjct: 2   MLIYNSQTHKKEEFIPAEKGRVRMYVCGPTVYDQIHIGNARTFLSFDTIRRYLQYKGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N+TD+DDKII RA +           S I    ++ F++   R   L P  +PR
Sbjct: 61  -VVFAQNLTDVDDKIINRANENGVEA------SEIARTYSRAFIEQMHRFNILDPDIRPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  M  +IQ +I +  AY A+  ++ F   S  +YG+ S R +D+ + G RV    
Sbjct: 114 ATQEIHAMQTMIQTLIANKCAYVADNGDVYFSVRSDASYGTVSGRNLDDLRAGERVEVND 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH EC AM  HYL    DIHGGG DL+FP
Sbjct: 174 AKRDPFDFALWKAAKPGEPAWDSPWGAGRPGWHTECCAMIHHYLDAPIDIHGGGQDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS CA   +  A+ W+H G L ++G KMSKS GNF T+ ++L+T       + 
Sbjct: 234 HHENENAQSVCAW-SQPLAHYWMHTGMLRVDGEKMSKSLGNFYTLKDVLDT-------YS 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
           A  +RL ML THYR P+DF+ +RL  A+  L++      +                    
Sbjct: 286 ADEVRLLMLQTHYRAPLDFSFERLKGAQGTLARIKSCVKNLRWAAEHDSEDAGVGVGVGA 345

Query: 345 ------------------GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHD--- 380
                               ID A    +  + +D N   A+ A+  L   + K  D   
Sbjct: 346 DGDADAADAALEFDSAFGRTIDKAQIEFVQQMDDDFNAAGALAAIFNLVAAANKYLDAAG 405

Query: 381 ----------LLPIFNASAHILGI--------EVCKEHLN----------KNISIAIEKL 412
                        +      +LGI        ++  E L+           +I  A E L
Sbjct: 406 AHPSVALALRAADMLCELCGVLGIALTRPVQQDLPSELLDVARELAGYEGNDIDAAQEAL 465

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +  R      K ++ AD IR ++ + G ++ED          TR K+K
Sbjct: 466 LSARATARSNKDWARADAIRDKISALGLVVEDTAA------GTRIKRK 507


>gi|328884016|emb|CCA57255.1| Cysteinyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 466

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 162/484 (33%), Positives = 250/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P ++ +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFTPLTPGHVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFDYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII +   +            I  +N + F      L CL P+++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKGADQ------GRPWWSIGYENERAFNSGYDALGCLPPSYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P+MI +++ +I  GHAYEA+  + FD  S P Y   S + ID+ +        
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYEADGSVYFDVRSFPGYLELSNQDIDDLRQPA-EDGI 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKATKPGEPDWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A+ W+HN ++ + G KMSKS GN + ++E++       ++W
Sbjct: 232 PHHENEIAQAKAF--GDDFASYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KAW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++             +       + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRATEKAGKDVAPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPHALAIIHTTVRQGNSALAADDKDEAIARLAEVRAMLGVLGLDPLDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++++R    + K +++AD IR QL   G  +ED  +     
Sbjct: 403 EETGGGEELHGAVDTLVRLVLEQRESARERKDWATADAIRDQLNQSGLAIEDSPDGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGNR 466


>gi|258655032|ref|YP_003204188.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
 gi|258558257|gb|ACV81199.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
          Length = 473

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 164/483 (33%), Positives = 241/483 (49%), Gaps = 51/483 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPM-IVFDVLYRLLRY 59
           M + + +Y+T  R +  F+ + P  + +Y CG TV    HIG+ R   IV+DVL R L +
Sbjct: 1   MSQSLHLYDTATRSVRPFEPLQPGVVSLYNCGATVQWHPHIGHLRGAGIVYDVLRRWLEF 60

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
              E  V +VRN+TDIDDKI+ +A +               + + + F      L CL P
Sbjct: 61  TGYE--VRHVRNVTDIDDKILTKAAE------AGRPWWEWATTHERSFDDAYDTLGCLRP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + +PRAT HIPQ++ +I  +I  GHAY A  ++ F   + P+YG  S ++IDE   G   
Sbjct: 113 SVEPRATGHIPQILEMIAALIEAGHAYAAAGDVYFAVRTQPDYGFLSGQRIDEMVQGET- 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++PADF LWK + P EP W+SPWGRGRPGWHIECSAM+  YLG  FDIHGGGLD
Sbjct: 172 -EAGGKRDPADFTLWKAAKPGEPSWDSPWGRGRPGWHIECSAMARAYLGTEFDIHGGGLD 230

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS      +  A  W+H+ ++ + G KMSKS GN +++  + E  +   
Sbjct: 231 LIFPHHENEAAQSHGL--GDVFARYWMHSHWVTMAGEKMSKSLGNILSVPTITEKVR--- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------GI 346
                  +R  ++  HYR  I+++ + L +A     +                     G 
Sbjct: 286 ----PVALRYYLISVHYRSSIEYSQEALDDAAKAYERIEAFLHRAADRAGAGADGVPIGE 341

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVC 397
           +  A   A+ +DL    A+  +H+  R               +L     A   +LG++  
Sbjct: 342 VPDAFRQAMNDDLGVPRALAVVHEKVRAGNAALARSDDDAAQELASSVRAMVAVLGLDPW 401

Query: 398 ---------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                       L +     ++ L+ ER      + F+ AD IR Q+ + GF +ED K+ 
Sbjct: 402 AAPWVERKVDRRLVEATGRLLDGLLAERAQARADRDFARADEIRTQVAAAGFAIEDTKDG 461

Query: 449 DNG 451
              
Sbjct: 462 PVW 464


>gi|262200969|ref|YP_003272177.1| cysteinyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262084316|gb|ACY20284.1| cysteinyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 463

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 155/477 (32%), Positives = 236/477 (49%), Gaps = 46/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R++ +F  + P    +Y+CG TV    HIG+ R  I FD+L R L +  G
Sbjct: 1   MTLRLYDTATREVRDFVPLHPGRASVYLCGATVQGVPHIGHVRSGIAFDILRRWLAH--G 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRN+TDI+DKI+ +A +               + + ++F      L  L P+ +
Sbjct: 59  GLDVLFVRNVTDIEDKILRKAAE------AGRPWWEWAATHEREFTDAYDALGVLPPSGE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  I QM+  +  +I  GHAY A+  + FD  S+P+YG+ S  K+D+   G      
Sbjct: 113 PRATGFITQMVEYMDRLIERGHAYAADGNVYFDVRSLPDYGALSGHKLDDVHQGESA--G 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++  LG  FDIH GG+DLIF
Sbjct: 171 TGKRDPRDFTLWKAAKPDEPSWPTPWGPGRPGWHLECSAMATALLGPEFDIHCGGMDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+  A   +  A  W+HNG++ + G KMSKS GN + I  +L+  +      
Sbjct: 231 PHHENEIAQAHGA--GDPFARYWLHNGWVTMGGEKMSKSLGNVVAIPAMLQRVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
            A  +R  +   HYR  ++++   LTEA     +               + G IDP    
Sbjct: 283 -AVELRYYLGSAHYRSMLEYSDGALTEAAAGYRRVESFLQRVVARVGEVAIGEIDPEFGV 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL--- 401
           AL +DL   +A+  +H + R      +               A   +LG++   EH    
Sbjct: 342 ALDDDLGVPAALAVVHNVVRHGNTALESGDGAAALAAASSVRAMMGVLGVDPLDEHWATA 401

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    + + +   +Q R      K +++AD +R +L   G  + D  +     
Sbjct: 402 GDDSAATSALDVLVRAELQRRADARAAKDWATADGVRDRLAQAGVEVTDTPDGAQWA 458


>gi|224372980|ref|YP_002607352.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589717|gb|ACM93453.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 464

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 160/482 (33%), Positives = 246/482 (51%), Gaps = 50/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++  ++  +F+ I     R+YVCGPTVYD AH+G+AR  I FD+L R L     + 
Sbjct: 1   MTIYDSHLKQKVDFKPIKEGEARIYVCGPTVYDDAHLGHARSSISFDLLRRTLEKLGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII +            ++  IT      +++D   L       +P+
Sbjct: 60  -VTFVKNFTDIDDKIINK------MNQTGKSLKEITEYYIDSYLRDMGALNVKRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  LIQN++  G+AY+  N +I FD S    Y   S +  D++ +     +  
Sbjct: 113 ATESLEAMFDLIQNLLDKGYAYQLPNGDIYFDVSKDEEYCKLSNKCQDDEVVHRV--DTE 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL---GK-VFDIHGGGL 238
            K+NPADF LWK      +  ++SP+G+GRPGWHIECSAM   ++   G+   DIHGGG 
Sbjct: 171 GKRNPADFALWKACKGEDDVCFDSPFGKGRPGWHIECSAMIKKHIAYNGEYEIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQ+ CA      A  W+HNGF+ + G KMSKS GN   I + L      
Sbjct: 231 DLFFPHHENEEAQTHCAYGEH-LAKYWMHNGFVQINGEKMSKSLGNSFFIKDAL------ 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDP 349
            + +P  V+R  ++ THYR P++F+ + L  ++  L K  +                 + 
Sbjct: 284 -KHYPGEVLRFYLMSTHYRAPLNFSEEDLIASKKRLDKLYRLKKRIYGLAKKQKDSEFEA 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L A+ +DLN   A+  + +  +E+ +  D           +L        +LGI    
Sbjct: 343 KLLEAMSDDLNISKALAVVDEFVKEANEALDKNPKDKVLKQKILSNIEFINELLGIGGSD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  +++     I +L+++R    K K F +AD IR +L S G  ++D  N    +
Sbjct: 403 AYEYFQAGIDEETKAKINELIEKRTQAKKEKDFETADKIRDELTSMGIQIQDTPNGTVWE 462

Query: 453 RM 454
           ++
Sbjct: 463 KV 464


>gi|325954818|ref|YP_004238478.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
 gi|323437436|gb|ADX67900.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
          Length = 489

 Score =  504 bits (1299), Expect = e-140,   Method: Composition-based stats.
 Identities = 157/486 (32%), Positives = 233/486 (47%), Gaps = 40/486 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++K+YN+L  +  +F  I+   + MYVCGPTVY   H+GN R  + FD++YR L    
Sbjct: 4   QHQLKVYNSLSGQKEKFVPINKEFVGMYVCGPTVYSHVHLGNVRTFMSFDMIYRYLLLLG 63

Query: 62  GEKCVTYVRNITDIDDKIIE--RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
            +  V YVRNITD+   + +    +    +         I  K T  F     +     P
Sbjct: 64  YK--VRYVRNITDVGHLLDDSDEDKIAKKARLEKVEPMEIVQKYTVDFHDVLRKFNNHPP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQKM 175
             +P AT HI + I + + +I  G AYE+N  + FD         NYG  S R I++   
Sbjct: 122 NVEPTATGHIVEQIVITKELIEKGLAYESNGSVYFDVKKYNEKGGNYGELSNRNIEDLMA 181

Query: 176 GTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            TR    +  K+NP DF LWK++ P     W SPWG G PGWH+EC+ MS+ YLG+ FDI
Sbjct: 182 NTRTLDGQDEKRNPQDFALWKKALPDHIMRWPSPWGEGFPGWHLECTVMSTKYLGEQFDI 241

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL- 292
           HGGG+DL FPHHE EIAQ+  A   E     W+H   L L G+KMSKS GN I   ELL 
Sbjct: 242 HGGGMDLKFPHHECEIAQAKGAYGQEP-VKYWLHANMLTLNGQKMSKSTGNTILPEELLS 300

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
               F  + +   VIR  M+  HYR  +DF+ + +  +E   ++  +   +   I+P   
Sbjct: 301 GNNSFFDKGFSPMVIRFFMMQAHYRSILDFSNEAILASEKGYTRLMEAYKTIPSIEPNAT 360

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAH 390
                      +  A+ +D NT   I  L    +         E+    DL  +      
Sbjct: 361 STFDVKAFETKLYEAMDDDFNTPILIAHLFDAVKIINSLKEGTETLNTEDLALLQKIMND 420

Query: 391 ----ILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               +LG++  +   +    +   ++ L++ R      K ++ +D IR +L S G  L+D
Sbjct: 421 FVVKVLGLKEEETSSDSTHKLDGVLQMLIEMRNQARVDKNWTLSDQIRDELSSLGIQLKD 480

Query: 445 YKNPDN 450
            K+   
Sbjct: 481 SKDGTT 486


>gi|187631656|sp|A2C808|SYC_PROM3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 499

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 173/507 (34%), Positives = 242/507 (47%), Gaps = 76/507 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+   F  +   ++ +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MSLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI++RA ++        ++  I+ +N + F +D   L  L P   
Sbjct: 61  --SVTFVQNFTDIDDKILKRAAEKK------CSMEHISEQNIEAFHQDMDALGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  +  +  LI  +   G AY  + ++ F       YG  S R ++EQ+        
Sbjct: 113 PRATQCLDGIRALIGELETSGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++  DF LWK +   EP + SPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DAEEARKQHSFDFALWKGAKTGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   ++ A  W+HNG +N+ G+KMSKS GNF TI  LLE+    
Sbjct: 233 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQ--- 339
                   +RL +L  HYR+P+DFT   +  A                      WP+   
Sbjct: 288 --GVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYAEALNWPECKP 345

Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-------------- 373
                       T      I    + AL +DLN+  AI  L  LAR              
Sbjct: 346 LPQEVMQPAHSSTLEQCSEIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLERGDT 405

Query: 374 ---ESTKNHDLLP---IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLK 421
              + T   +LLP   +    A++LG+E  K      E  N+     I+  +  R     
Sbjct: 406 KAIQETAQLNLLPRWQLLVELANVLGLEAEKAAKLAPEGNNRVDENHIQLAIAARKEAKA 465

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNP 448
            + F+ AD IR +L ++G  L D    
Sbjct: 466 ARDFAKADRIRDELRAQGIELIDKPGG 492


>gi|260428499|ref|ZP_05782478.1| cysteinyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260422991|gb|EEX16242.1| cysteinyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 474

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 204/469 (43%), Positives = 265/469 (56%), Gaps = 31/469 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I + N+  RK   F+ IDP ++R+YVCGPTVYD AH+GNARP IVFDVL+RL+R  YG
Sbjct: 1   MDISLTNSRTRKKEPFRPIDPEHVRIYVCGPTVYDRAHLGNARPAIVFDVLFRLMREVYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRN TD+DDKI  RA++         +I  IT++ TQ ++ D   +  + PTH 
Sbjct: 61  ADHVTYVRNFTDVDDKINARAKES------GRSIGEITAETTQWYLDDMAAVGVMEPTHM 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT +I QM+ +I  +I  GHAYEA   ++F   S   YG+ S R +D+   G RV   
Sbjct: 115 PRATQYIGQMVAMISELIEKGHAYEAEGHVLFAVESYTAYGALSGRSVDDMIAGARVEVA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV------------ 230
            +K+NP DF+LWK S P  PGWESPWGRGRPGWHIECSAM+   L K             
Sbjct: 175 PYKRNPMDFVLWKPSEPDLPGWESPWGRGRPGWHIECSAMAEELLWKTPLEEGRLSEAAL 234

Query: 231 -----FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
                FDIHGGG DL FPHHENEIAQSCCA+ +E  A  W+HN  L +EG+KMSKS GNF
Sbjct: 235 AHPHLFDIHGGGNDLTFPHHENEIAQSCCANGVEHMAQTWLHNEMLQVEGKKMSKSLGNF 294

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--S 343
            T+ +LL+    G    P  VIR  ML THYR+P+D+T ++  E E  L KW        
Sbjct: 295 FTVRDLLDGHD-GLPGVPGEVIRFVMLSTHYRKPMDWTAEKAREGEATLRKWRAMVDGLE 353

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--LGIEVCKEHL 401
            G +   VL A+ +DLNT  AI  LHKLA                     LG       +
Sbjct: 354 AGPVPEGVLKAVADDLNTAGAIAELHKLAGAGDAAALKAGAGLLGLLTPELG---DWAAV 410

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           + +++   ++L   R   ++ K FS  D ++  L + G  +   K    
Sbjct: 411 SVDLTALADRLAGARSAAMESKDFSEVDRLKTALLAAGVEVRMSKAGVE 459


>gi|302530720|ref|ZP_07283062.1| cysteinyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302439615|gb|EFL11431.1| cysteinyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 461

 Score =  504 bits (1298), Expect = e-140,   Method: Composition-based stats.
 Identities = 157/474 (33%), Positives = 234/474 (49%), Gaps = 45/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R   EF  +      +YVCG TV    HIG+ R M+ +DVL R L +   + 
Sbjct: 3   LHLYDTATRAPREFTPVRSGTASIYVCGATVQGVPHIGHVRGMLNYDVLRRWLLHSGLD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A                 + + + F K    L CL P+  PR
Sbjct: 62  -VLLVRNVTDIDDKILTKAAD------AGRPWWEWAATHERAFEKAYEDLGCLPPSVTPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+ QM+ L++ +I  GHAY  + ++ F   S P YG+ S +++DE + G        
Sbjct: 115 ATGHVTQMVQLMERLIEAGHAYAVDGDVYFSVKSFPEYGALSGQQLDEVQQGET--PTRG 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIHGGG+DL+FPH
Sbjct: 173 KRDSRDFTLWKSAKPGEPSWPTPWGDGRPGWHLECSAMATNYLGAEFDIHGGGVDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS  A      A  W+HN ++ + G KMSKS GN ++I  +LE        + A
Sbjct: 233 HENERAQSNAAGDG--FARYWLHNAWVTMSGEKMSKSLGNTVSIPAMLER-------YRA 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGIIDPAVLSALY 356
           P +R  ++  HYR  ++++   ++EA     +            +   G +     +A+ 
Sbjct: 284 PELRYYLVQPHYRSTVEYSDGAVSEAAQGYRRIEAFLRRAESAGAVPVGEVAAEFAAAMD 343

Query: 357 NDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHL------ 401
           +DL T +A   +H   R+           K  +L         +LG++            
Sbjct: 344 DDLATPAAFAVVHNTVRDGNAALDSGDTTKALELAGTVRGMTGVLGLDPLSPDWADGGSD 403

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 +   +E L+ ER      K F+ AD  R +L + G  +ED  N     
Sbjct: 404 TPVRDALGTLVEALLAERQEARAAKDFARADAARDRLVAAGIAVEDTPNGPQWT 457


>gi|332665290|ref|YP_004448078.1| cysteinyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
 gi|332334104|gb|AEE51205.1| cysteinyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
          Length = 502

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 166/510 (32%), Positives = 242/510 (47%), Gaps = 66/510 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KIYN+L ++   F+ I P  + MYVCGPTVY   H+GN R  + FD++YR L++ 
Sbjct: 1   MNSELKIYNSLSKEKEVFRPIHPGRVGMYVCGPTVYSNVHLGNCRTFVSFDIVYRYLQFL 60

Query: 61  YGEKCVTYVRNITDID-----------DKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
             +  V YVRN+TD+            DK+ +RAR E            I  K T  F  
Sbjct: 61  GYK--VRYVRNVTDVGHLEGDVDTGGEDKLGKRARLEELQPM------EIAHKYTVGFHD 112

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----YGSF 165
                  L P+ +PRAT HIP+ I ++Q I+ +G+AYE N  + FDT         YG  
Sbjct: 113 MMRVFNVLPPSIEPRATGHIPEQIEMVQQILDNGYAYEVNGSVYFDTLKFAEKDGIYGEL 172

Query: 166 SRRKIDEQKMGTR--VPEKYHKKNPADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAM 222
           S RKI++    +R  + ++  K++P+DF +W K +      W SPW  G PGWH+ECSAM
Sbjct: 173 SGRKIEDLIAESRNNLKKQDEKRHPSDFAIWIKAAPEHLMHWNSPWSVGFPGWHLECSAM 232

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S+ YLGK FDIHGGG DL FPHHENE+AQ+  A      A  W+H   L L G+KMSKS+
Sbjct: 233 STKYLGKTFDIHGGGNDLKFPHHENEVAQNYGACGCTP-ARTWMHGNMLLLNGKKMSKSD 291

Query: 283 GNFITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
           GN I   EL   K     + +   V+R  ML THYR  +D +   L  AE    +  +  
Sbjct: 292 GNSIMPEELFTGKSAHLSKGYTPMVVRFFMLQTHYRSTLDLSDDALQAAEKGYRRLMEAY 351

Query: 341 ----------STSKGIIDPA-------VLSALYNDLNTVSAIQALHKLARESTK------ 377
                       + G  D         V   + +D NT  A+  L ++            
Sbjct: 352 ATLQALPFSGDAAAGAQDKEVSEWITSVHDEMNDDFNTPKALARLFEIVSRVNSWKGGQL 411

Query: 378 ---------NHDLLPIFNAS-AHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMK 423
                      +L   F      I G++      + +    +   +  ++  R  +   K
Sbjct: 412 SMEGLTEATYKELKATFTTFIFDIFGLQDEAAASSDDGFKTLDGLMHLIIDMRQDVRTRK 471

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            ++++D IR  L+  G +L+D K      +
Sbjct: 472 DWAASDKIRDVLKEVGIVLKDGKEGTAWSK 501


>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
 gi|212673441|gb|EEB33924.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
          Length = 483

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/499 (35%), Positives = 242/499 (48%), Gaps = 69/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK  EF  + P  + MYVCG T YD+ HIG+AR  +VFDVL R LR    + 
Sbjct: 1   MQLYNTLTRKKEEFVPVRPGKVNMYVCGITAYDYCHIGHARSALVFDVLVRHLRALGLD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN TD+DDKII RA +E            +       F +D  RL  +   H+PR
Sbjct: 60  -VTFVRNFTDVDDKIIRRANEEK------RDWREVGQTYIDAFHEDMDRLNVVRADHEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I QM  L   +I  G AY   + ++ F   + P YG  S R +DE + G RV    
Sbjct: 113 ATEYIQQMQDLCSELIAQGKAYAVPSGDVYFRVRAYPPYGKLSGRSLDELQAGARVAPGE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS  YL    DIHGGG DLIFP
Sbjct: 173 EKQDPLDFALWKAAKPGEPFWESPWGKGRPGWHIECSAMSKEYL--PLDIHGGGQDLIFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+  A    + A  W+HNGF+ +   KMSKS GNF TI ++L        S+ 
Sbjct: 231 HHENEIAQTEAACSC-QLARFWVHNGFVQVNAEKMSKSLGNFKTIRDILA-------SYL 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
              +R  +L  HYR PIDFT   + E+E  L +  +     G                  
Sbjct: 283 PETLRFFLLGKHYRSPIDFTADIMDESEKALQRIYECQLEAGKALERAKWKKVDLPADIL 342

Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIF---- 385
                      +AL +D+NT  A+  +    R   +  +            LL  F    
Sbjct: 343 KEWDEHGQGFNAALDDDVNTAQALGHIFSQVRLVNRVLEDKALRAGEGARRLLEEFFERH 402

Query: 386 ---NASAHILG------IEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRK 433
              +A   + G      +   ++     ++I    ++ L+ ER      K F+ +D +R 
Sbjct: 403 NDWSAQLGLFGQDPATFLLALRDQRAARLNIDVPRVQTLLDERAAARAAKDFARSDELRA 462

Query: 434 QLESKGFILEDYKNPDNGQ 452
            L   G  + D        
Sbjct: 463 ALAELGVAVRDTVEGQVWD 481


>gi|210623152|ref|ZP_03293607.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
 gi|210153796|gb|EEA84802.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
          Length = 420

 Score =  504 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 153/443 (34%), Positives = 222/443 (50%), Gaps = 56/443 (12%)

Query: 49  VFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
           +FD L R L Y   +  VTYV+N TD+DDKII+R+ +E        +   +  K  +++ 
Sbjct: 1   MFDTLRRYLEYQGYD--VTYVQNFTDVDDKIIKRSHEE------GISPEEVAEKYIKEYF 52

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
            D   L     T  P+ T +IPQ+I  IQ +   G+AY  N ++ FDT     YG  S +
Sbjct: 53  VDCDGLGIKRATVHPQVTQNIPQIIEFIQELEEKGYAYAVNGDVYFDTRKFEGYGKLSGQ 112

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            ID+ + G R+     K++P DF+LWK     EPGW+SPWG GRPGWHIECS MS  YLG
Sbjct: 113 NIDDLEAGARIEVNEQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLG 172

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           +  DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNF T+
Sbjct: 173 ETIDIHAGGQDLTFPHHENEIAQSEARSG-KPFAKYWMHNGYINVNNEKMSKSKGNFFTV 231

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------ 342
            ++        + +   ++R  +L  HY+ P++F+   L +A   L +   T        
Sbjct: 232 RDI-------SKKYDLEIVRFFLLSAHYKSPVNFSDDLLAQAGAGLERLYNTKEKLVFTL 284

Query: 343 ----------------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------ 380
                                    +  + +DLNT  AI A+ +L++    N D      
Sbjct: 285 SHLEGEMTDAEKALVEELDGFRKKFVEVMDDDLNTADAITAIFELSKFINLNVDENSSKE 344

Query: 381 ----LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                L  FN    +L I    +  + ++   +E L+Q+R    K K F+ AD IR+QL 
Sbjct: 345 FAEKCLAEFNELTGVLNI--VNKEKDNSVDAEVEALIQQRTDAKKNKDFAKADAIRQQLL 402

Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
             G +LED +      +  +WK+
Sbjct: 403 DMGIVLEDTR------QGVKWKR 419


>gi|167586800|ref|ZP_02379188.1| cysteinyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 407

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 160/394 (40%), Positives = 224/394 (56%), Gaps = 30/394 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F    P  +RMYVCG TVYD+ H+G+AR ++VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  --RVTYVRNITDIDDKIIRRA------VENGETIKSLTDRFIAAMHEDEDALGIQRPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +      NYG  S + +D+ + G RV  
Sbjct: 114 PRATHFIPQMLGMIETLEANGYAYQANDGDVNYSVRKFANYGKLSGKSLDDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWKR+ P +P    W+S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKRAKPEDPEGASWDSKYGAGRPGWHIECSAMGCTLLGEHFDIHGGGQ 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +   N WIHNGF+ ++  KMSKS GNF TI ++LE     
Sbjct: 234 DLQFPHHENEIAQSEGATG-QTFVNYWIHNGFVQVDNEKMSKSLGNFFTIRDVLE----- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
              + A V+R  ++ THYR P++++   L +A   L++             A        
Sbjct: 288 --QYDAEVVRFFIVRTHYRSPLNYSDVHLDDARAALTRLYTALKDVAPDAAALDWNEPHA 345

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
               +A+ +D NT  A+  L +LA E  +  D  
Sbjct: 346 QRFAAAMNDDFNTSLAVSVLFELAGEVNRTRDAA 379


>gi|297526293|ref|YP_003668317.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255209|gb|ADI31418.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 480

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 176/498 (35%), Positives = 236/498 (47%), Gaps = 64/498 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +IK+YNTL RKI EF+ + P  ++MYVCGPTVYD+ HIG+ R  +V+D L R        
Sbjct: 6   EIKLYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKRYFALRGY- 64

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +V NITDIDDKII RA +E            +    T+ +++   +L        P
Sbjct: 65  -HVIHVMNITDIDDKIINRANREK------RDWREVAETYTRDYLESLRKLNVK-VDLHP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T HI ++I  IQ +I  G+AY A +  + F+    P YG  S R  +++         
Sbjct: 117 RVTEHIKEIIEFIQTLIDKGYAYIAPSGSVYFEVDKYPEYGELSGR-TNKELWSQEKEFI 175

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK P DF LWK   P EP WE+PWGRGRPGWHIECS MSS YLGK FDIHGGG DLIF
Sbjct: 176 SEKKKPYDFALWKAWKPGEPYWEAPWGRGRPGWHIECSVMSSRYLGKQFDIHGGGTDLIF 235

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS  A  ++     W+H G + +   KMSKS GN I + E         + W
Sbjct: 236 PHHENERAQSEAAFGVKPWVKYWVHTGMVMMGSEKMSKSLGNIIPLREAF-------KEW 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
               +RL  L +HYR P+ FT + + + +    +    + +                   
Sbjct: 289 GPETLRLWYLTSHYRRPLVFTEESIKQTQKYYERLVSVTNTIKKLSREAVGLHRMNDEDL 348

Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTK-------------NHDLLPIF 385
                   I      AL ND NT  A+  + +      K              + LL  F
Sbjct: 349 KILDKLLEIRSRFHEALSNDFNTPQALAVISEFMTLVFKEIQYNPKYMLVLTAYKLLREF 408

Query: 386 NASAHILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           N    +L   +    E L   +   I  +V  R  L + K +  AD IR +L   G IL 
Sbjct: 409 NIVLGVLDKYLAETPEELETLLDNVINIVVDIRRELRERKLYDLADRIRAELGKHGIILM 468

Query: 444 DYKNPDNGQRMTRW-KQK 460
           D        + T W ++K
Sbjct: 469 DR------GKETTWMRRK 480


>gi|149194602|ref|ZP_01871698.1| cysteinyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135346|gb|EDM23826.1| cysteinyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 464

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 163/487 (33%), Positives = 254/487 (52%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY++  ++  EF  I    +R+YVCGPTVYD AH+G+AR  I FD+L R L     + 
Sbjct: 1   MKIYDSHLKEKVEFIPIKEKEVRIYVCGPTVYDDAHLGHARSSISFDLLRRTLECLGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII++  +         ++  IT    +++++D   L       +P+
Sbjct: 60  -VTFVKNFTDIDDKIIKKMNETKK------SLKEITEYYIKRYLEDMDALNVKRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  +IQ ++  G+AY+  N +I FD S    Y   S +  D++ +  RV  + 
Sbjct: 113 ATQSLEAMFEIIQILLDKGYAYKLPNGDIYFDVSKDEEYCKLSNKCQDDEVVH-RVEIE- 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL---GK-VFDIHGGGL 238
            KKNPADF LWK      +  ++SP+G+GRPGWHIECSAM   ++   G+   DIHGGG 
Sbjct: 171 GKKNPADFALWKACKGESDVCFDSPFGKGRPGWHIECSAMIKKHIAYDGEYEIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS CA      A  W+HNGF+ + G KMSKS GN   I + L      
Sbjct: 231 DLFFPHHENEEAQSHCAYGGH-LAKYWMHNGFVQINGEKMSKSLGNSFFIKDAL------ 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDP 349
            + +   V+R  ++ THYR P++F+ + L  ++  L K  +                 + 
Sbjct: 284 -KHYSGEVLRFYLMSTHYRAPLNFSEEDLIASKKRLDKLYRLKKRIYGVSKKQQDKSFEE 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L+A+ +DLN   A+  + +  +++ +N D           ++        +LG+    
Sbjct: 343 NLLNAMSDDLNISKALAVVDEFIKDANENLDKNPKDKILKQKIVSNIEFINKLLGVGGSD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  +++     IE+L+ +R    K K F  AD IR +L+  G  ++D  N     
Sbjct: 403 AYEYFQAGIDEETKKKIEELIAKRSEAKKEKNFELADKIRDELKEMGISIQDTPN----- 457

Query: 453 RMTRWKQ 459
             T+W++
Sbjct: 458 -GTKWER 463


>gi|86133639|ref|ZP_01052221.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
 gi|85820502|gb|EAQ41649.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
          Length = 492

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 165/486 (33%), Positives = 236/486 (48%), Gaps = 40/486 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++KIYN+L +   +F+ I    + MYVCGPTVY  AH+GN R  + FDV+YR L +  
Sbjct: 6   ENQLKIYNSLSKSKEDFKPITEGYVGMYVCGPTVYSNAHLGNVRTFMFFDVVYRYLLHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D      R    +         +  K T  F         L
Sbjct: 66  YK--VRYVRNITDAGHLENDADEGEDRISKKARLEEIEPMEVVQKYTVDFHNVLENYNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ II  G AYE N  + FD    +   NYG  S RK+++  
Sbjct: 124 PPSIEPTATGHIVEQIEMIKEIIEKGFAYEVNGSVYFDVLEYNKKENYGILSGRKVEDLI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  KKNP DF LWK++       W SPW  G PGWH+ECS MS+ YLG+ FD
Sbjct: 184 HNTRTLDGQSDKKNPQDFALWKKADDRHIMRWPSPWSDGFPGWHLECSVMSTKYLGESFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQS     ++   N W+H   L L  +KM+KS GNFI  NE+L
Sbjct: 244 IHGGGMDLKFPHHECEIAQSKTCSGVKP-VNYWMHTNMLLLNSQKMAKSTGNFILPNEIL 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----------EAEILLSKWPQTS 341
                   +++ A V+R   +  +YR  +DF+   L           EA   L K    S
Sbjct: 303 TGNNDILPKAFSASVVRFFNMQANYRSILDFSGDALEASEKGHSKLMEAVAFLDKIEAGS 362

Query: 342 TSKGIID---PAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNA--- 387
           TS   ++       +A+ +D NT   I  L +  +   +  +         L +F     
Sbjct: 363 TSTFNVENWKKDCYAAMNDDFNTPILISHLFEAVKLINQIKEGKGSLTETDLTLFKTTIK 422

Query: 388 --SAHILGIEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                +LG+       N + +   +E L++ R    + K ++ +D IR +L + G  L+D
Sbjct: 423 AFVFDVLGLIGEDAQDNSDKVKGVVELLIKLRKEARENKDWALSDQIRDELVALGIQLKD 482

Query: 445 YKNPDN 450
            K    
Sbjct: 483 GKEGTT 488


>gi|297158396|gb|ADI08108.1| cysteinyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 466

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 162/484 (33%), Positives = 253/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFNPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFSYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++ ++      N     I  +N + F      L CL  T++
Sbjct: 61  D--VTFIRNVTDIDDKIIAKSAEQ------NRPWWAIGYENERAFNSAYDVLGCLPVTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P+MI +++ +I  GHAY A   + FD  S P Y   S +++D  +  +    +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYAAEGSVYFDVRSYPGYLQLSNQELDGLRQPSG-EGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIF
Sbjct: 172 YGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGVDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQAKAF--GDDFATYWTHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++             +       + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRVTEKAGKVVPPAPEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL- 401
             A+ +D     A+  +H   R+                L    A   +LG++   EH  
Sbjct: 343 AEAMDDDFGVPQALAVVHTTVRQGNSALTADDKESAVARLAEVRAMLGVLGLDPLDEHWA 402

Query: 402 -----NKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 +++   ++ LV    ++R      K +++AD IR QL+  G ++ED  +    +
Sbjct: 403 GGPDRGEDLHGVVDSLVRLVLEQRQAARTRKDYATADAIRDQLQQSGLVIEDTPSGPRWE 462

Query: 453 RMTR 456
             +R
Sbjct: 463 LGSR 466


>gi|162147983|ref|YP_001602444.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786560|emb|CAP56142.1| putative cysteinyl-tRNA synthetase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 711

 Score =  503 bits (1296), Expect = e-140,   Method: Composition-based stats.
 Identities = 185/434 (42%), Positives = 251/434 (57%), Gaps = 26/434 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ ++++  RK   F  +DP N+R+Y CGPTVYD AHIGN R M+  D+L RLLR+ Y 
Sbjct: 6   PQLTLHDSRSRKTVPFAPLDPGNVRVYYCGPTVYDLAHIGNLRAMVTADILVRLLRHLY- 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITD+DDKI  RAR         + I  +T++  + F +D   +  L P  +
Sbjct: 65  -PRVTYVRNITDVDDKINTRARAN------GETIDSLTARTIRDFHEDLDAVGILPPDIE 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI +M+ LI  +I  GHAYEA   ++F  S  P YG+ S R  ++   G RV   
Sbjct: 118 PRATHHIAEMLTLIGQLIDSGHAYEAQGHVLFAVSRFPAYGALSGRSPEDLLAGARVEVA 177

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++P DF+LWK S P  PGWESPWGRGRPGWHIECSAMS  YLG+ FDIHGGG DL+F
Sbjct: 178 PYKRDPGDFVLWKPSAPDLPGWESPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLLF 237

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C     + AN W+HN  L + G KMSKS GNF+T+ + L          
Sbjct: 238 PHHENELAQSQCCFPHGRFANHWVHNAMLLVNGEKMSKSLGNFLTVRDALSVS------- 290

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYN 357
           PA  +RL +L   YR  ++FT+  L +A+  L+++ +            +   VL+AL +
Sbjct: 291 PAEALRLLLLHAQYRSVLNFTLAGLEDAKQTLNRFYRAVGDTPPDGTVPVPAPVLAALCD 350

Query: 358 DLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS-----IAIEK 411
           DLNT  A+  +H LA R    + D      A+  +LG+    E              IE+
Sbjct: 351 DLNTPRALAEMHALADRALAGDRDAALGLRAAGQLLGLLGQTEDAWFRAGTYVHPETIER 410

Query: 412 LVQERLILLKMKKF 425
           L+ ER    K + F
Sbjct: 411 LIVERQDARKSRDF 424


>gi|11498023|ref|NP_069247.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
 gi|3122884|sp|O29836|SYC_ARCFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2650218|gb|AAB90823.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
          Length = 467

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 174/491 (35%), Positives = 246/491 (50%), Gaps = 59/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++YNTL RKI + + I     ++MYVCG T YD++HIG+AR  + FDV  R L Y   E
Sbjct: 1   MEVYNTLSRKIEKLEDIVDGKRVKMYVCGITAYDYSHIGHARSAVFFDVFRRYLEYLGYE 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N TD+DDKII RA +E            +  K  ++++KD   L    PT+QP
Sbjct: 61  --VVYVQNFTDVDDKIINRAVKE------GKTQKEVAEKFIEEYLKDMEALNVKKPTYQP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           + T HIP +I  IQN+I  G+AY  + ++ F   +  +YG  S++ ++E     R+    
Sbjct: 113 KVTEHIPDIIEFIQNLIEKGYAYVIDGDVYFHVPAFEHYGELSKQSLEELNRH-RIEPDE 171

Query: 184 HKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K++  DF LWK +   +      ++SPWGRGRPGWHIECS MS+ YLG  FDIHGGG D
Sbjct: 172 RKRDVKDFALWKSAKEADLKAQAVFDSPWGRGRPGWHIECSVMSAKYLGVPFDIHGGGKD 231

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS     +E    IW+HN F+ ++G KMSKS GN + I ++L       
Sbjct: 232 LIFPHHENERAQSFARFGVEP-VKIWVHNDFIRIKGEKMSKSLGNIVRIRDVL------- 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------STS 343
           + +   V+R  +L  HYR P+D+T + L  A+                            
Sbjct: 284 QRYEGEVLRYFLLTAHYRSPLDYTEEALERAKRAYEYLRSALINLDMEIAYLKTFGDRKE 343

Query: 344 KGIIDPA-----VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASA 389
              +D          A+  DL+T  AI  LH+ A    K           +L   F    
Sbjct: 344 GNQVDVEDYIRRFEEAMNRDLHTPDAIAVLHEFAGLINKSLYELSLNQAEELYEAFKRLC 403

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+    E +        EK+V ER    K + F  AD IR +   +G  L D     
Sbjct: 404 GVLGLFEKMERVPALSREDAEKVV-ERERARKERNFELADAIRDEFAKRGIRLIDT---- 458

Query: 450 NGQRMTRWKQK 460
              + TRW+ +
Sbjct: 459 --PKGTRWRVE 467


>gi|254387148|ref|ZP_05002419.1| cysteinyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
 gi|194345964|gb|EDX26930.1| cysteinyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
          Length = 466

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 162/484 (33%), Positives = 255/484 (52%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTSARQIRDFTPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII ++ ++            I  +N + F    T L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIITKSAEQ------GRPWWSIGYENERAFNDGYTALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ +M+ +++ +I  GHAYEA+  + FD  S P Y + S +++D     +   E 
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYEADGNVYFDVRSFPGYLALSNQELDNLMQPSGTGET 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLDLIF
Sbjct: 173 -GKRDPRDFAMWKSAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      ++ A  W+HN ++ + G KMSKS GN + ++E++       ++W
Sbjct: 232 PHHENEIAQAKAY--GDEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KAW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDP------AV 351
              V+R  +   HYR  I+++ + L EAE   ++           + G ++P      A 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFCQRVVEKAGGPVEPAAEVPLAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
              + +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEVMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAIARLSEVRAMLGVLGLDPLDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++++R      K +++AD IR QL+  G ++ED  +     
Sbjct: 403 GEADRGEDLHGAVDTLVRLVLEQRESARGRKDWATADAIRDQLQQSGLVIEDSPSGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|22299370|ref|NP_682617.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22295553|dbj|BAC09379.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 463

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 158/479 (32%), Positives = 231/479 (48%), Gaps = 64/479 (13%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
            +Y CG TVYD+ H+G+AR  + +DVL R L +      V YV+N TDIDDKI+ RA   
Sbjct: 2   TIYACGVTVYDYCHLGHARSYVAWDVLRRYLTFLGY--TVHYVQNFTDIDDKILRRA--- 56

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  + ++ ++ +    + +D   L  L  +  PRAT  IP++I LIQ ++  G+AY
Sbjct: 57  ---YENGETMATVSDRYIAAYHQDMAALNILPASAYPRATEVIPEIINLIQGLLDRGYAY 113

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VPEKYHKKNPADFILWKRSTPMEP 202
            A  ++ +  +  P+YG  S R++++   G        E+  K++P DF LWK + P E 
Sbjct: 114 VAGGDVYYAVAQFPSYGKLSGRQLEQLMAGASGRIEEEEEQRKRHPLDFALWKAAKPEEM 173

Query: 203 G----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                WE+PWG+GRPGWHIECSAM     G   DIH GG+DLIFPHHENEIAQS      
Sbjct: 174 SVYHPWEAPWGKGRPGWHIECSAMVRQAFGATVDIHCGGMDLIFPHHENEIAQSEAVT-Q 232

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           +  A  W+HNGF+ +   KMSKS GNF TI +LL       +      +RL +L   YR+
Sbjct: 233 QPLARFWLHNGFVTVNTEKMSKSLGNFTTIRDLL------AQGLDPMALRLLVLQAQYRK 286

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------PAVLSALYNDLNTVS 363
           P+DFT + LT A        +       I                 A   A+  DLNT +
Sbjct: 287 PLDFTPEALTAAAKGWQTLGEALHLHQQIPLPPIDAAEVRSHPKTEAFCQAMDEDLNTAA 346

Query: 364 AIQALHKLARESTKNHDLL-----------------PIFNASAHILGIEVCKEHLN---- 402
           A+  + +LA+   +                            A +LG+E  +E       
Sbjct: 347 ALAVIFELAKTLNREQHRYLHGGGWGRSPAEVSRDWHTLVTLAQVLGLEAKEESNPALTV 406

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           +     I+ L+  R    + K ++ +D +R  L ++G  L D K+       T W + P
Sbjct: 407 ELTDEEIQALIAARTAARQAKNYTESDRLRDLLLAQGVKLVDQKDGT-----THWFRVP 460


>gi|332637987|ref|ZP_08416850.1| cysteinyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 471

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 162/492 (32%), Positives = 244/492 (49%), Gaps = 60/492 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K +NT+  +   F  I+   I MYVCGPTVY++ HIGNAR  I FD + R   Y   E 
Sbjct: 2   MKTFNTMSLEKETFTPINEKTINMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I  A ++         +  +  K    F +DT  L     T +PR
Sbjct: 61  -VNYVSNFTDVDDKMIAAASEQ------GITVPELADKYIDAFNEDTAPLNIKPATVRPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT HIP++I  ++++I  G+AYE+  ++ F       YG  + + + E +          
Sbjct: 114 ATEHIPEIIEFVEDLIKKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMESNAAGRLDDG 173

Query: 181 EKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK  +      W SPWG+GRPGWHIECS MS+ YLG   DIHGGG+D
Sbjct: 174 ELARKEDPMDFAVWKGENGDGAIAWNSPWGKGRPGWHIECSVMSTKYLGNHLDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHH NEIAQ+      EK    W+HNGF+ +  E  KMSKS GNF T++ELL+    
Sbjct: 234 LAFPHHTNEIAQTEAHTG-EKFVEKWLHNGFVTVGDENEKMSKSLGNFTTVHELLQQID- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------QTSTSKG 345
                   V+R  +  T YR PI ++ + +  A   L +                + S  
Sbjct: 292 -----DPMVLRFFIATTQYRRPIAYSQKNMDLAARNLERIRTGYRNLQFRLGSAVAGSDA 346

Query: 346 IIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
            I+        A + A+ +D N  +A+ A+++L   +                +L     
Sbjct: 347 DIEAKAQEKVDAFVEAMDDDFNAQNAMTAVYELIELANLYSQAEEVKTDTVNFVLKQIKD 406

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             ++ G++  ++     +   ++ L++ER    +   F+ +D IR +L S+G ILED   
Sbjct: 407 LMNVFGVDGLEQA--PLLDADVDALIKERDAARETSNFARSDEIRDELASRGIILEDT-- 462

Query: 448 PDNGQRMTRWKQ 459
                + TRW++
Sbjct: 463 ----PQGTRWRR 470


>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
          Length = 523

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 183/515 (35%), Positives = 271/515 (52%), Gaps = 82/515 (15%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y   E
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        +    ++S+   +F +D   L CL PTH+P
Sbjct: 81  --VNYVRNFTDIDDKIIKRANE------AGEDALSLSSRFIDEFHRDMYELQCLPPTHEP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI Q+I LI  I+ +G AY    ++ F   + P+Y S S RK+D+ + GTRV    
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A    +    W+HNGF+N +G+KM+K++ NF TI +++         + 
Sbjct: 253 HHENELAQSQAAYPESE-VKCWMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YH 304

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------ST 342
              +RL ++ THYR  ++ +   L  A   L    QT                     + 
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 364

Query: 343 SKGIIDP---AVLSALYNDLNTVSAIQALHKLARE----------------STKNHDLLP 383
            + +I+      L  + +DL+T +A+  L KL ++                  K  D + 
Sbjct: 365 DQKLIEENHSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQ 424

Query: 384 IFNAS-------AHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMK 423
              A          ILG+       E  K+  +K +      +  +++++++R +  K K
Sbjct: 425 ALVALQNEVTDKLSILGLMPMSSLAEALKQLKDKALKRAGMTAEQLQQMIEQRTLARKNK 484

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            F+ +D IR +L + G  L D          T W+
Sbjct: 485 DFAESDRIRTELSALGIALMDEPT------GTLWR 513


>gi|305664986|ref|YP_003861273.1| cysteinyl-tRNA synthetase [Maribacter sp. HTCC2170]
 gi|88707398|gb|EAQ99643.1| cysteinyl-tRNA synthetase [Maribacter sp. HTCC2170]
          Length = 493

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 152/487 (31%), Positives = 232/487 (47%), Gaps = 41/487 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++K+K+ N+L  K  +F+ I+  +I MYVCGPTVY   H+GN R  + FD+++R  ++  
Sbjct: 6   EQKLKVSNSLTGKKQDFEPINEGHIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHLG 65

Query: 62  GEKCVTYVRNITD----IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD    +DD      +    +         +  + T  F     +   L
Sbjct: 66  YK--VRYVRNITDAGHLVDDADEGEDKIAKKARLEKIEPMEVVQRYTVDFHNILDQFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQK 174
            P+ +P AT HI + + +I+ I+    AYE N  + FD         YG  S RK+++  
Sbjct: 124 PPSIEPTATGHIIEQLEIIKEILKKEFAYEVNGSVYFDVKKFNESFEYGKLSGRKLEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K++P DF LWK++ P     W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 184 ANTRELTAQSDKRSPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKYLGETFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+  ++      N W+H   L + G+KM+KS GN I   E+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQAEASNGHSP-VNYWLHANMLTMNGKKMAKSTGNNILPGEIF 302

Query: 293 ETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
             K     +++   V+R  M+  HY   +D +   L  +E    +  +   +   +D   
Sbjct: 303 TGKNDILSKAFTPSVVRFFMMQAHYTSILDLSNDALLASEKGYQRLMEAVENLDGLDAGG 362

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
                          A+ +D NT   I  L +  +               + +LL     
Sbjct: 363 KSDFDVIEWRQKCYDAMNDDFNTPILIANLFEAVKHINLIQEGNESISISDKELLQQTMK 422

Query: 388 --SAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                +LG+E   E    +  +   +E L+Q R      K F ++D IR QL + G  L+
Sbjct: 423 GFVFEVLGLEQKNESGQDSNKLQGVVELLIQLRNEARSNKDFVTSDKIRDQLLALGIQLK 482

Query: 444 DYKNPDN 450
           D K    
Sbjct: 483 DGKEGTT 489


>gi|317504596|ref|ZP_07962566.1| cysteine--tRNA ligase [Prevotella salivae DSM 15606]
 gi|315664290|gb|EFV03987.1| cysteine--tRNA ligase [Prevotella salivae DSM 15606]
          Length = 496

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 164/508 (32%), Positives = 240/508 (47%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+     N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQNLIIYNTLTRHKELFKPQHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHI 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            I    T ++   
Sbjct: 61  GYK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHAA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
              L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD     N   YG  S 
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKEILNNGYAYESNGSIYFDVVKYNNDHRYGILSG 172

Query: 168 RKIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R + +    +R       KK+  DF LWK++ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RNLTDLINNSRELQGVSEKKHQVDFALWKKAQPEHIMRWPSPWSVGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DLIFPHHE EIAQ+  A + ++  + W+HN  + + G+KM KS GNF
Sbjct: 233 YLGSHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +          +++    IR  +L  HYR  +DF+ + L  A+    +        
Sbjct: 292 ITLEQFFTGNHASLTQAYSPMTIRFFILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDL 351

Query: 345 GIID-----------------PAVLSALYNDLNTVSAIQALHKLAR------------ES 375
             +                       A+ +DL T   I  L +               +S
Sbjct: 352 ERVPVSDHCDAETQQFVKNFRQRCYDAMNDDLQTPLVISYLFEACHLINTLLDHKTTIDS 411

Query: 376 TKNHDLLPIFNASA-HILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
              H+L       A ++LG++  K   N+    A    ++ ++  R      K ++++D 
Sbjct: 412 DSLHELSEAMKLFAFNLLGLKNEKGDNNEAREEAYGKVVDMVLDLRAKAKADKDWATSDK 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR  L   GF ++D K+         WK
Sbjct: 472 IRDALSEAGFEVKDTKD------GVTWK 493


>gi|288800463|ref|ZP_06405921.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
 gi|288332676|gb|EFC71156.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
          Length = 497

 Score =  502 bits (1294), Expect = e-140,   Method: Composition-based stats.
 Identities = 166/501 (33%), Positives = 246/501 (49%), Gaps = 59/501 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+++ IYNTL RK   F+ ++  N+ MYVCGPTVY   H+G+ARP I FD+L+R L++  
Sbjct: 3   KQQLVIYNTLSRKKETFEPLNAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLKHLG 62

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            +  V YVRNITD+          DDKI ++AR E            I    T ++    
Sbjct: 63  YK--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHDAM 114

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRR 168
             L  L P+ +P+AT HI +   L++ I+ +G AYE+N  I FDT+       YG  S R
Sbjct: 115 NALNVLPPSIEPQATGHIIEQEQLVKEIMDNGFAYESNGSIYFDTAKYNQKYRYGKLSGR 174

Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +D+    +R       K+N  DF LWK++TP     W S W  G PGWH EC+AM   Y
Sbjct: 175 NLDDVINASRELGGVEDKRNQTDFALWKKATPEHIMKWPSSWSEGFPGWHCECTAMGRKY 234

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG+DL+FPHHE EIAQ+  A +       W+HN  + + G+KM KS GNFI
Sbjct: 235 LGSNFDIHGGGMDLMFPHHECEIAQA-VASQGHDMVRYWMHNNMITINGKKMGKSLGNFI 293

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           T+ E  + T +   +++    IR  +L  HYR  +DF+ + L  AE  L++         
Sbjct: 294 TLEEFFKGTHEALTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGLNRLLSGIKDLD 353

Query: 346 IIDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKNH 379
            I PA                   +A+ +DL T   I  L +           + +  + 
Sbjct: 354 RIQPANESDKATATFVKECRSRCYNAMNDDLQTPVVISILFEACHIINTIVDHKGTISSE 413

Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
           DL  +          ++G+       N+    A    ++ ++  R      K ++++D I
Sbjct: 414 DLAELKETMHLFAFDLMGLRAENSDNNQAREEAYGKVVDMVLDLRSKAKADKDWATSDKI 473

Query: 432 RKQLESKGFILEDYKNPDNGQ 452
           R  L   GF ++D K+    +
Sbjct: 474 RDMLADAGFEVKDTKDGAVWK 494


>gi|139438524|ref|ZP_01772040.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
           25986]
 gi|133776063|gb|EBA39883.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
           25986]
          Length = 488

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 179/499 (35%), Positives = 245/499 (49%), Gaps = 70/499 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+   K  EFQ I+   +RMYVCGPTVYD  HIGNAR  I FDV+ R L     E 
Sbjct: 1   MRIYNSATHKKEEFQPIESGKVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII+RA ++          + + ++ + +F+        L P  +PR
Sbjct: 60  -VTFAQNLTDVDDKIIKRANEQ------GRTAAEVATEFSDKFIGVMRAANVLDPDVRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I+ +I  GHAY A+  ++ F   S PNYG  S R ID+  +G R+ E  
Sbjct: 113 ATKEIGPMIAMIKTLIEQGHAYAADNGDVYFAVRSDPNYGQVSGRNIDDLMVGARIEENE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +P DF LWK + P EP W SPWG GRPGWH EC+AM   YLG   DIHGGG DL FP
Sbjct: 173 DKNDPLDFALWKAAKPGEPSWPSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA      +N W+H G L ++G KMSKS GNF T+ E+LE          
Sbjct: 233 HHENECAQATCAWHQG-FSNTWMHTGMLLVDGEKMSKSLGNFFTLAEVLEQH-------S 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
           A  +RL ML T YR P+DF+ +RL  AE  L++   T  +                    
Sbjct: 285 AAALRLLMLQTSYRSPLDFSWERLEGAENSLTRIAGTVENLRWAANHATADADEAASEAF 344

Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNA 387
                    A +  + +D NT  A+ A+     E  +  +                    
Sbjct: 345 AAKAAETRAAFMECMDDDFNTAGAMGAVFGFVTECNQYLEQAGDAADKAAALAAADTLAE 404

Query: 388 SAHILGIEVCK-----------------EHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
               LG+E+ +                  +   ++  A  K+++ R      K +  AD 
Sbjct: 405 LLDTLGVELPEPKVELPLGLLGVAAGLVAYTGDDVDEAAAKILEARAEARAAKNWDLADA 464

Query: 431 IRKQLESKGFILEDYKNPD 449
           IR QL+  G  +ED     
Sbjct: 465 IRDQLKDLGLTIEDTAAGT 483


>gi|126661994|ref|ZP_01732993.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
 gi|126625373|gb|EAZ96062.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
          Length = 494

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 167/489 (34%), Positives = 234/489 (47%), Gaps = 43/489 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + + IYNTL  +   F  I   NI MYVCGPTVY   H+GN R  + FDV++R L++  
Sbjct: 6   NQTLHIYNTLSGEKETFTPIHEGNIGMYVCGPTVYSNVHLGNVRTFMSFDVIFRYLQHLD 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     DD  ++  R    S         I  K T  F K       L
Sbjct: 66  YK--VRYVRNITDAGHLTDDGDVDNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLDTFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKIDEQ 173
            PT +P AT HI + I L Q +I  G AYE+N  + FD  +      NYG  S R I+E 
Sbjct: 124 PPTIEPTATGHILEQIELTQKLIDTGFAYESNGSVYFDVFAYNQKGMNYGELSNRNIEEL 183

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  KKNP DF LWK ++P     W SPWG G PGWH+EC+AMS+ YLG+ F
Sbjct: 184 FANTRDLDGQSEKKNPQDFALWKNASPAHIMRWNSPWGEGFPGWHLECTAMSTKYLGETF 243

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHE E+AQ    +      N W+H   L + G +MSKS GN+I   EL
Sbjct: 244 DIHGGGMDLKFPHHECEVAQGKACNGHSP-VNFWMHTNMLTMNGLRMSKSTGNYILPMEL 302

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------ST 342
           +     F  + +   ++R   L  HYR  +D +   +  +E   S+  ++        ++
Sbjct: 303 VTGENTFFEKPFQPNIVRFCFLQAHYRSVLDISNDAMLASEKGYSRLMESYKLIPMLKAS 362

Query: 343 SKGIID-----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
           +   +D      +   A+ +D NT   I  L + AR     +D                 
Sbjct: 363 ATSTLDIASWKQSCYDAMNDDFNTPILIAQLFEGARYINLVNDGKESLTTEHIQLLQNTI 422

Query: 388 ---SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                 +LG+       +   + +S  +E L+  R      K F+ +D IR QL + G  
Sbjct: 423 SSFLFDVLGLSNEASGNSNTTEKLSGVVEMLIGMRNEARANKNFALSDQIRDQLLALGIQ 482

Query: 442 LEDYKNPDN 450
           L+D K+  +
Sbjct: 483 LKDGKDGTS 491


>gi|189183685|ref|YP_001937470.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|229470555|sp|B3CRX9|SYC_ORITI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|189180456|dbj|BAG40236.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 478

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 188/492 (38%), Positives = 274/492 (55%), Gaps = 53/492 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL RK   F  ++  +++MYVCGPTVYD  HIGNAR ++V+D+LYR+L   YG
Sbjct: 1   MNLYIYNTLSRKKERFVPLNCKSVKMYVCGPTVYDIPHIGNARSVVVYDLLYRVLSLLYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + +TYVRNITDIDDKII RA++      +  +I  +T + T +F +D + L C  PT +
Sbjct: 61  RQNITYVRNITDIDDKIINRAKE------LKISIFKLTHETTIKFHEDMSYLGCCNPTIE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT++I  MI +I ++I  G+AY  +   + F   +  +Y   SRR  D   + +R   
Sbjct: 115 PKATDNIDVMINIITSLIQTGNAYSTDDGHVYFAVKTFQDYNLLSRRTFDSMILNSRESS 174

Query: 182 KYHKKNPADFILWKRS----TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +  K   ADF+LWK +      ++  ++SPWG+GRPGWHIECSAMS  +LG+ FDIHGGG
Sbjct: 175 EPQKSYFADFVLWKPANADNEDIDAVFDSPWGKGRPGWHIECSAMSYKFLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA    + A  W+HNGFL ++G KMSKS  NF+T+ +L +    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPESRHALYWVHNGFLTVKGEKMSKSLNNFVTVRDLQKQNIN 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
           G        +RL  L THYR+P+DF  + L +A+ +++    T  S              
Sbjct: 295 GA------AVRLMFLSTHYRKPLDFNDKSLNDAKNIINYLYDTIDSVNGTAQQQDNIKAE 348

Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARES---TKNHDLLPIFNASA---HILGIE 395
                     +SAL +DLN+  AI  L  +A++     ++ D L +  A     ++LGI 
Sbjct: 349 FKGNAFTVEFISALLDDLNSPKAIACLLNIAKQIRRQNQSEDKLALTQALLYASNLLGIL 408

Query: 396 VCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              + +  +  +          I+ L+ +R+   + K ++ AD IR QL S G  L D  
Sbjct: 409 HNYQFIKDSNDVKDNSNVTPHEIDLLIAKRIQAKQDKDWNLADQIRSQLLSNGISLTDKA 468

Query: 447 NPDNGQRMTRWK 458
           +       T WK
Sbjct: 469 DGT-----TSWK 475


>gi|210632458|ref|ZP_03297386.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
 gi|210159553|gb|EEA90524.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
          Length = 493

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 188/508 (37%), Positives = 255/508 (50%), Gaps = 75/508 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+   +  +F  I+   +RMYVCGPTVYD  HIGNAR  I FDV+ R L     E 
Sbjct: 1   MKIYNSATHQKEDFHPIEEGRVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+ +N+TD+DDKII RA ++            + ++ + +F+        L P  +PR
Sbjct: 60  -VTFAQNLTDVDDKIINRANEQ------GRTAEEVATEFSNKFIGVMRAANVLDPDARPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  MI +I+ +I   HAY A+  ++ F   S P+YG  S R ID+  +G R+ E  
Sbjct: 113 ATKEIGAMIGMIKTLIEGDHAYAADNGDVYFSVRSDPSYGEVSGRNIDDLMVGARIEENE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH EC+AM   YLG   DIHGGG DL FP
Sbjct: 173 DKRDPLDFALWKAAKPGEPSWKSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDLAFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ CA   E  AN W+H G L ++G KMSKS GNF T+ E+LE          
Sbjct: 233 HHENECAQATCAWH-EGFANTWMHTGMLLVDGEKMSKSLGNFFTLAEVLEKH-------S 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------ 351
           A  +RL ML THYR P+DF+ +RL  AE  L++   T  +       V            
Sbjct: 285 AAALRLLMLQTHYRSPLDFSWERLEGAENSLARIAGTCRNLKWAADHVEGEPNAELAEAL 344

Query: 352 -----------LSALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHI--- 391
                       + + +D NT  AI A  +L  E+ K  +            A A +   
Sbjct: 345 TAAMEKAAADYEACMDDDFNTAGAIAAYFQLVTEANKYLEQAAGAVDEVTARACAAVIAG 404

Query: 392 ----LGIEV-----------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
               LG+E+                    +   ++  A EK+++ R      K +++AD 
Sbjct: 405 ALAQLGVELPVIEEPLPVGLLGVAAGLTGYTGDSVDEAAEKILEARAAARAAKDWTTADA 464

Query: 431 IRKQLESKGFILEDYK-----NPDNGQR 453
           IR QL   G  +ED        P NG R
Sbjct: 465 IRDQLRDMGLAIEDTAAGSRITPQNGDR 492


>gi|111021434|ref|YP_704406.1| cysteinyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|123340129|sp|Q0S888|SYC_RHOSR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110820964|gb|ABG96248.1| cysteine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 464

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 157/477 (32%), Positives = 234/477 (49%), Gaps = 47/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T  R + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L     
Sbjct: 1   MTLRLFDTETRALRDFVPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWL--LAH 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDI+DKI+ +A +               +   + F     +L  L P+ +
Sbjct: 59  DYDVAFVRNVTDIEDKILNKAAE------AGRPWWEWAATFERSFTWAYQQLGVLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QM+ ++Q +I +GHAY A  ++ FD  S P YGS S  K+D+   G    E 
Sbjct: 113 PRATGHITQMVEMMQRLIDNGHAYAAGGDVYFDVRSYPRYGSLSGHKLDDVHQGESAGEC 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GGLDL+F
Sbjct: 173 --KRDPRDFTLWKAEKPGEPSWPTPWGRGRPGWHLECSAMAEFYLGAAFDIHCGGLDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+ CA   +  A  W+HNG++ + G KMSKS GN +++  +L       +  
Sbjct: 231 PHHENEIAQAKCA--GDDFAQYWLHNGWVTMGGEKMSKSLGNVLSVPNVL-------KKV 281

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLS 353
               +R  +   HYR  ++++   L E      +                 G+   A   
Sbjct: 282 RPQELRYYLGSAHYRSMLEYSDTALDEGAAAFRRIESFVLRTQERAGEVPVGLWTEAFAR 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN 404
           AL +DL   +A+  +H   RE     D         +     A   ILG++   EH  + 
Sbjct: 342 ALDDDLAVPAALAEVHGKVREGNIALDGGDLEGARGIASQVRAMLGILGVDPLDEHWTQE 401

Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + +   ++ R      K ++ AD +R +L   G  + D  N    
Sbjct: 402 TADASAATDALDVLVRAELERRQSARAEKNWAVADEVRDRLIRAGIEVTDTPNGPEW 458


>gi|320009404|gb|ADW04254.1| cysteinyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 466

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 159/484 (32%), Positives = 247/484 (51%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++T  R+I +F  +    + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT++RN+TDIDDKII++A ++      N     I  +N + F      L CL PT++
Sbjct: 61  D--VTFIRNVTDIDDKIIKKAAEQ------NRPWWSIGYENERAFNDGYDVLGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +MI +++ +I  GHAYEA+  + FD  S   Y   S + +D+ +  +    +
Sbjct: 113 PRATGHITEMIEMMRGLIERGHAYEADGNVYFDVRSYEGYLELSNQDLDDLRQPSG-DNE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DLIF
Sbjct: 172 TGKRDKRDFAMWKSAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+      +  A  W+HNG++ L G KMSKS  N + +++++       + W
Sbjct: 232 PHHENEIAQAKAF--GDDFAKYWVHNGWVTLSGEKMSKSLDNSVLVSDMV-------KQW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + L EAE   ++                 +   + PA 
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGPVEAAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQALAIIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++ +R    + K + +AD IR QL   G ++ED        
Sbjct: 403 GESDRGEDLHGVVDTLVRLVLDQRQSARERKDWPAADAIRDQLNQSGLVIEDSPAGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|320450390|ref|YP_004202486.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150559|gb|ADW21937.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 481

 Score =  502 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 161/490 (32%), Positives = 242/490 (49%), Gaps = 49/490 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IY+TL+R   +F    P ++ +YVCGPTVY   H+G+AR  IV+DVL R L +   
Sbjct: 1   MGLRIYDTLQRSKVDFTPATPGHVGIYVCGPTVYSDPHLGHARGPIVYDVLRRYLLHLGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V +V NITD+    DD      + E  +         +  K T  +    T L  L 
Sbjct: 61  --RVRFVSNITDVGHLTDDADQGEDKIERRAKLERLEPMEVAEKYTWSYFDAITALNVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P+  PRA+ HIP+ I L + ++  G AYE    + F   + P YG  S ++++E + G R
Sbjct: 119 PSIAPRASGHIPEQIELTERLLKLGFAYERKGSVYFRVRAFPEYGKLSGKRLEELRAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           V  +  K++P DF LWK + P     W+SPWG G PGWHIEC+AMS  YLG+ FDIH GG
Sbjct: 179 VEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGFDIHAGG 238

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++LL     
Sbjct: 239 IDLQFPHHECEIAQAEAA--GYRFARHWMHHNHVLLEGEKMAKSTGNLVLLHDLL----- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------P 338
             ++     +R  +L THYR P+DFT + L  A+   ++                    P
Sbjct: 292 --KAHEPMALRFYLLQTHYRSPMDFTWEGLEAAKRGYARLLQAYREVRTRLNAAHPGITP 349

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILG 393
           +   +   ++   L A+ +DL+T  A+ A      E  K       D L       H LG
Sbjct: 350 ELERALDALEKDFLEAIEDDLSTPEALAAFFTFLPELNKLLPEAKRDTLRRTAQVFHTLG 409

Query: 394 IEVCKEHLNKNISIAI---------EKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +      + +   +           L++ R    + K ++ +D IR++L+S G I+ED
Sbjct: 410 EGILGLFPERVLEEKVSGPLLEGLVALLLELREEARRAKDYAKSDLIRERLKSLGIIVED 469

Query: 445 YKNPDNGQRM 454
            K     +  
Sbjct: 470 TKEGPKWRIG 479


>gi|149369775|ref|ZP_01889626.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
 gi|149356266|gb|EDM44822.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
          Length = 493

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 160/494 (32%), Positives = 241/494 (48%), Gaps = 54/494 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++ IYN+L +    F  I+   + +YVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   EQQVHIYNSLTKAKEVFTPINEGAVGLYVCGPTVYSNVHLGNCRTFLSFDLVFRYLKHLD 65

Query: 62  GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            +  V YVRNITD           DD I ++AR E      N     +  K T  F    
Sbjct: 66  YK--VRYVRNITDAGHLENDGESGDDPIAKKARLE------NIEPMEVVQKYTVDFHDTM 117

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
            +     P+ +P AT HI + I ++Q+II  G+ YE N  + FD +      +YG  S R
Sbjct: 118 AKFNAFPPSIEPTATGHIIEQIEIVQDIIKKGYGYEKNGSVYFDVTKFNEDHDYGKLSGR 177

Query: 169 KIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
            +++    +R    +  KKNP DF LWK++ P     W SPW  G PGWH+EC+AMS+ Y
Sbjct: 178 NLEDMVSNSRELAGQSEKKNPQDFALWKKAEPKHIMRWPSPWSDGFPGWHLECTAMSTKY 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGG+DL FPHHE EIAQ+   +      N+W+H   L L G+KMSKS GN I
Sbjct: 238 LGNKFDIHGGGMDLKFPHHECEIAQAEACNNESP-VNVWMHANMLTLNGKKMSKSTGNNI 296

Query: 287 TINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
             +EL+        +++PA V +  M   HYR  +DF+ + L  +E   ++  +      
Sbjct: 297 LPSELISGNNDILNKAFPATVAKFFMYQAHYRSILDFSNEALEASEKGYNRLMESYRNID 356

Query: 340 -------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------ 380
                  TS +      +   A+ +D N+   I  L +  +      D            
Sbjct: 357 ALPVSEMTSMNVSTWKQSCYDAMNDDFNSPILIAQLFEATKFINGVKDGNEKLSETDKAL 416

Query: 381 LLPIFNAS-AHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
           L    +A    +LG+E      + +   +  A+  L+Q R      K ++ +D IR QL+
Sbjct: 417 LKSTMHAFIFDVLGLEDVSMEGSGDSSKLEGAMNLLIQLRNEARANKDWAKSDEIRDQLQ 476

Query: 437 SKGFILEDYKNPDN 450
             G  L+D K+   
Sbjct: 477 EIGIQLKDGKDGTT 490


>gi|296111414|ref|YP_003621796.1| cysteine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
 gi|295832946|gb|ADG40827.1| cysteine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
          Length = 483

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 162/490 (33%), Positives = 243/490 (49%), Gaps = 58/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I P  I MYVCGPT+Y++ HIGNAR  I FDV+ R   Y   + 
Sbjct: 16  IHVYNTLTREKEIFKPITPGKINMYVCGPTIYNYIHIGNARSAIAFDVVRRYFEYRGYD- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR++            I ++    F +DT  L     T + R
Sbjct: 75  -VNYVSNFTDVDDKIIKRAREQGVDEM------TIANRYADAFHQDTLPLNIKPATVRSR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ IP +I  + ++I  G+AYE+  ++ F       YG  + + + E +          
Sbjct: 128 ATDVIPDIILFVGDLIKKGYAYESEGDVYFRAKRFKGYGILAHQDLAEMEANAAGRLDDI 187

Query: 181 EKYHKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK S +  E  W+SPWG+GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 188 ELTRKEDPIDFAVWKASHSKDEISWQSPWGKGRPGWHIECSVMAQKYLADTIDIHGGGID 247

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +   N W+HNGF+N+   KMSKS GNF T++++L       
Sbjct: 248 LAFPHHTNEIAQSEARTG-KTFVNYWMHNGFVNVNDEKMSKSLGNFTTVHDMLANYD--- 303

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPA- 350
                  IR  +  T YR  I+++   L +A + L +             T+    D A 
Sbjct: 304 ---DPMAIRYLLSTTQYRRSINYSDDTLEQARVALDRIRTAYRNLSFRMETAVNGRDQAV 360

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
                       +A+ +D NT +A+ ++ +L   +    +           LL       
Sbjct: 361 DRVIEERISDFEAAMDDDFNTPNALASIFELVTIANTLAESQQIYLETTQHLLHTIAKLM 420

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            + GIE     +  N++   ++L++ R +  + + F ++D +R+ L   G ++ED     
Sbjct: 421 SVFGIENL--SVASNLTKEQDELLKLRHLARETRDFEASDRLRQNLHQLGIVVEDTPQGQ 478

Query: 450 NGQRMTRWKQ 459
                 RW +
Sbjct: 479 ------RWHR 482


>gi|172041351|ref|YP_001801065.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|171852655|emb|CAQ05631.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 487

 Score =  501 bits (1291), Expect = e-139,   Method: Composition-based stats.
 Identities = 160/502 (31%), Positives = 239/502 (47%), Gaps = 70/502 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +++IY+T  RK+ EF  +    + +Y+CG TV    HIG+ R  + FDVL R L   
Sbjct: 1   MPLQLRIYDTASRKVREFTPLREGKVSIYLCGATVQSIPHIGHVRSGVAFDVLRRWLLAQ 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V +VRN+TDIDDKI+ +A +       N       + + + F     +L  L P+
Sbjct: 61  GYD--VAFVRNVTDIDDKILTKAAEN------NRPWWEWAATHERAFTWAYDQLGVLPPS 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT H+PQMI  +Q II +GH Y A+  +    +SI NYG  S +K+DE   G    
Sbjct: 113 VEPRATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPASIENYGFLSGQKLDELDQGESA- 171

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNP DF +WK + P EP W++PWGRGRPGWHIECSAM+++YLG  FDIH GGLDL
Sbjct: 172 -GTGKKNPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATNYLGGEFDIHAGGLDL 230

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQ+  A      A  W+HNG++ + G KMSKS GN +++  +LE  +    
Sbjct: 231 QFPHHENEAAQATAAGDG--FAQYWMHNGWVTMSGEKMSKSLGNVLSVPNILEKVR---- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFT-----------------------------VQRLTEAE 331
                 +R  +   HYR  ++++                                   A 
Sbjct: 285 ---PVELRYYLGSGHYRSMLEYSESALAEAAAGYRRIEKFLLRAAAYLAAIEDDAPASAG 341

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LL 382
              ++ P+   + G    A    + +DL    A+  +H   RE  K  +         + 
Sbjct: 342 DQAARGPEQLVAVGQWPEAFAEKMNDDLAVPQALAVIHDAVREGNKALEVKDTETVMRVA 401

Query: 383 PIFNASAHILGIEVCKEHLNK-------------NISIAIEKLVQERLILLKMKKFSSAD 429
               A   +LG++   EH  +              +   ++  +Q R      K ++ AD
Sbjct: 402 GQVRAMMSVLGVDPFDEHWLEQTMAGQGSSAAMTALDSLVQDDLQRRAEARAEKNWAVAD 461

Query: 430 YIRKQLESKGFILEDYKNPDNG 451
            +R +L + G  + D  +    
Sbjct: 462 EVRDRLTAAGIEVTDTADGAQW 483


>gi|300174046|ref|YP_003773212.1| cysteinyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888425|emb|CBL92393.1| Cysteinyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 469

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 172/484 (35%), Positives = 241/484 (49%), Gaps = 52/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNTL R+   F++I P  I MYVCGPTVY++ HIGNAR  I FDV+ R   Y   + 
Sbjct: 2   IKVYNTLTREKEIFKSIIPGKINMYVCGPTVYNYIHIGNARSSIAFDVVRRYFEYRGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR+E            I +K    F++DT  L     T + R
Sbjct: 61  -VNYVSNFTDVDDKIIQRAREEGVDEM------TIANKYANAFIEDTLPLNIQPATVRAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP +I  +Q++I  G+AYEA  ++ F       YG  + + ++E            
Sbjct: 114 ATEVIPDIIVFVQDLINKGYAYEAKGDVYFRAKKFKGYGILAHQDLNEMAENAAGRLNDE 173

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK +    E  WESPWG GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 174 EMTRKEDPIDFAVWKATQAEDEISWESPWGSGRPGWHIECSVMAQKYLSNTIDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NE+AQS      +   N W+HNGF+N+   KMSKS GNF TI+++L+      
Sbjct: 234 LAFPHHTNEMAQSEAHTGQK-FVNYWMHNGFVNVNNEKMSKSLGNFTTIHDMLKHYD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------KGII 347
                  IRL +  T YR PI+++   LT+A + L +      +               +
Sbjct: 290 ---DPMTIRLLLATTQYRRPINYSSDTLTQARVALDRIRTGYRNLSFRLTNADVGKDADL 346

Query: 348 DPA-------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
           + A          A+ +D NT +A+ A+ +L   +    D           LL       
Sbjct: 347 ESAIKKQINIFEMAMDDDFNTPNALAAVFELVTLANTYADNKIVKIETVQYLLDTILLLL 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            + GI    +     I+ A ++L+  R+       F  +D IR+QL   G I+ED     
Sbjct: 407 GVFGITELNDK--PQITDAQKQLLAARVSARAAHDFELSDQIRQQLSESGIIVEDTTQGQ 464

Query: 450 NGQR 453
              +
Sbjct: 465 RWHQ 468


>gi|296118937|ref|ZP_06837510.1| cysteine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295968035|gb|EFG81287.1| cysteine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 473

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/479 (31%), Positives = 237/479 (49%), Gaps = 48/479 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  ++I++T  R + +F+ I P +  +Y+CG T     HIG+ R  + FD++ R L    
Sbjct: 11  QVNLRIFDTATRSLRDFEPITPGHASIYLCGATPQAKPHIGHLRSGVAFDIVRRWLMAQG 70

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V +VRN+TDIDDKI+ +A +       N       S   ++F K    L  L P+ 
Sbjct: 71  LD--VAFVRNVTDIDDKILNKAAEH------NRPWWEWVSTYEREFTKAYNTLGVLPPSV 122

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMG 176
           +PRAT  +PQM+  +Q +I  G AY +   + FD ++       +YGS S  ++++ + G
Sbjct: 123 EPRATGFVPQMVEYMQRLIDRGFAYASEGSVYFDVAAWVNAEGSDYGSLSGNRVEDMEQG 182

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               +   K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIHGG
Sbjct: 183 ET--DVIGKRSPQDFALWKAAKPGEPSWPTPWGAGRPGWHLECSAMSTYYLGSSFDIHGG 240

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENEIAQS  A      ANIW+HN ++ + G KMSKS GN + ++ LL+  +
Sbjct: 241 GLDLQFPHHENEIAQSHAAGDG--FANIWMHNHWVTMAGEKMSKSLGNVLAVDNLLDIVR 298

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     +R  +   HYR  ++++   LTEA     +  +        + G      
Sbjct: 299 -------PQELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEEFLARFDDVALGEWTDGF 351

Query: 352 LSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEHLN 402
             A+ +D +   A+  +H   RE  K            L       A ILG +      +
Sbjct: 352 EKAMNDDFSVPKALAEIHVAVREGNKALSASDEDTARTLAESVRRMAEILGFDPLSHQWS 411

Query: 403 K----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +           + + ++  ++ R      K ++ AD +R +L   G  + D  +    
Sbjct: 412 EGASDDSAALDALDVLVQAELERRAQARAEKNWAVADEVRDRLAQAGITVTDSADGATW 470


>gi|213019206|ref|ZP_03335013.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212995315|gb|EEB55956.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 440

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 194/452 (42%), Positives = 264/452 (58%), Gaps = 38/452 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG+  VTYVRNITDIDDKII  A ++ 
Sbjct: 1   MYVCGPTVYDTAHIGNARSIVVYDVLFRLLKFCYGK--VTYVRNITDIDDKIINAANEK- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N  I  I+   T+ F +D   + C  PT++P+AT +I  +I LI++++  GHAYE
Sbjct: 58  -----NSNIESISKYYTKTFHEDMESINCAEPTYEPKATENIDNIIKLIESLLQAGHAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---- 203
           +N  + F   S P YG  S +KIDE   G+RV    +KK+P DF+LWK +   +      
Sbjct: 113 SNKHVYFSVESYPEYGVLSGKKIDELNYGSRVEVGENKKHPGDFVLWKPANETDYKLSSH 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL FPHHENEIAQS  A      A 
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAESTFAK 232

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGFL +   KMSKS  N + + +LL++   G       VIR A+L THYR+P+D+T
Sbjct: 233 YWVHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG------EVIRYALLKTHYRKPLDWT 286

Query: 324 VQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              ++E++  L+K+ +         S   +    + AL NDLN   A+  LH++A E  K
Sbjct: 287 ENVISESQETLNKFYRLLRSTCIEESDTEVSKDFIEALKNDLNIPEAVAILHEMATEINK 346

Query: 378 NHD------LLPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
             +      L   F  SA  +GI      +   +      IE+L+  R +  + K + +A
Sbjct: 347 TSNEYEKLKLTKKFVKSARFIGILESSYQEWFASGVSHQEIERLIDLRKVAKQNKDYDTA 406

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           D IR+QL+  G  + D ++       T W  K
Sbjct: 407 DKIREQLKQMGVTISDNEDGT-----TTWYGK 433


>gi|319760441|ref|YP_004124379.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318039155|gb|ADV33705.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 468

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 179/487 (36%), Positives = 243/487 (49%), Gaps = 53/487 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL +K    + I+ + I++YVCG TVYD  H+G+AR   +FD + R L Y   + 
Sbjct: 2   LKIFNTLTQKKEILKPINFNTIKLYVCGVTVYDLCHLGHARTFSIFDTIIRYLNYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y RNITDIDDKII+RA   H      + I   T++  Q+   D   L  L P H+P+
Sbjct: 61  -VEYTRNITDIDDKIIQRAFSHH------ETIVQFTNRMIQEMYIDLDNLNILRPKHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            TN+I  +I  I  ++   HAY   N +++F  ++   YG  SR K   Q +        
Sbjct: 114 VTNYIDTIINCIHLLLKKKHAYITRNGDVMFSINTANKYGILSRNKKLIQSISKYTNHNT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKN ADF+LWK +   EP W SPW +GRPGWHIECSA+S + LGK  DIHGGG DL+FP
Sbjct: 174 IKKNSADFVLWKSAKFNEPYWMSPWSKGRPGWHIECSAISHNILGKNIDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           HHENEIAQS CA  I+     NIW+H G L L   KMSKS  NF TI E+L       + 
Sbjct: 234 HHENEIAQSACAYSIDPNVYVNIWMHVGMLLLNNEKMSKSLNNFFTIREIL-------KK 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPA 350
           +    IR  +L  HYR  + +    +  A++ L +               +  +      
Sbjct: 287 YDPETIRYFLLSAHYRNQLKYNDNNMKSAQLALKRLYIALYGINPIVHSANDEERYFTLK 346

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE------ 395
            +  + +D NT  A   L ++A E  +            L       A+ILGI       
Sbjct: 347 FIEKMNDDFNTPEAYSVLFEMAHELNRLKSKHYYIRAQRLATQLKLLANILGILYQNPEN 406

Query: 396 ----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                  ++ N      I+KL+Q R    K K +  AD IR QL + G ILED       
Sbjct: 407 YLQCQVSKNKNPFEIEKIQKLIQIREDARKNKNWELADKIRTQLTTLGVILEDEPEGK-- 464

Query: 452 QRMTRWK 458
              TRW+
Sbjct: 465 ---TRWR 468


>gi|327403405|ref|YP_004344243.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
 gi|327318913|gb|AEA43405.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
          Length = 517

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 167/503 (33%), Positives = 242/503 (48%), Gaps = 59/503 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + IYN+L  +   F+ I    + MYVCGPT+Y   H+GN R  I FD++YR L +  
Sbjct: 30  KHPLLIYNSLSGEKEVFKPIIAGKVGMYVCGPTLYSEPHMGNMRTFINFDLIYRYLLHLG 89

Query: 62  GEKCVTYVRNITDID----------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
            +  V YVRNITD            D I + AR E            I  K   +F    
Sbjct: 90  LQ--VKYVRNITDAGHITNSAGEAVDSIGKAARVEQVQSL------EIVYKYNVKFQDLQ 141

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRR 168
                L P+ +P AT HI + I +I+ II +G AY  N  + FD  +      YG  S R
Sbjct: 142 RIYNLLPPSIEPTATGHIQEQIEVIEKIIENGFAYVVNGSVYFDVRAYGEKFEYGILSGR 201

Query: 169 KIDEQKMGTRV-PEKYHKKNPADFILWKRSTPMEPG-WESPWGRGRPGWHIECSAMSSHY 226
           K+DE    TR    +  K+  ADF LWK+S P +   W SPWG G PGWHIEC+AMS+ Y
Sbjct: 202 KVDELAEETRELNAQEEKRFFADFALWKKSNPDDMQIWRSPWGDGNPGWHIECTAMSTKY 261

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG  FDIHGGGLDL FPHHE+EIAQSC +  +   AN W+H   LN+ G+KMSKS GN+ 
Sbjct: 262 LGDQFDIHGGGLDLKFPHHEDEIAQSCGSAGVSP-ANYWMHANMLNVNGQKMSKSLGNYF 320

Query: 287 TINELLE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
              E+++ T     + +   VIR  M+  HYR  +DFT   L  AE   ++  +     G
Sbjct: 321 LPKEIVDGTTDVFDKPYSPQVIRFCMMQAHYRSTLDFTPDSLNAAEKGFTRLSEAYEKLG 380

Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
            ++              +   A+ +D N    + +L +  +      +     +A     
Sbjct: 381 SLEVKETSSQDVPALVDSFYKAMNDDFNAPMLVASLFEAVKFINTVSEGKATISADDLEI 440

Query: 388 --------SAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                      +LG+ + K     N+ ++  ++ ++  R    + K +S++D IR +L  
Sbjct: 441 LTKEFTGFVFDVLGLSIEKSTAGANEALTATMDLVLDMRKSARENKDWSTSDKIRDRLAE 500

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
            G +++D K+         W  K
Sbjct: 501 AGIVVKDGKD------GVTWTVK 517


>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
 gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
          Length = 520

 Score =  501 bits (1290), Expect = e-139,   Method: Composition-based stats.
 Identities = 184/512 (35%), Positives = 267/512 (52%), Gaps = 79/512 (15%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y   E
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        +    ++S+   +F +D   L CL PTH+P
Sbjct: 81  --VNYVRNFTDIDDKIIKRANE------AGEDALSLSSRFIDEFHRDMYELQCLPPTHEP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI Q+I LI  I+ +G AY    ++ F   + P+Y S S RK+D+ + GTRV    
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A    +    W+HNGF+N +G+KM+K++ NF TI +++         + 
Sbjct: 253 HHENELAQSQAAYPESE-VKCWMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YH 304

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------ST 342
              +RL ++ THYR  ++ +   L  A   L    QT                     + 
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 364

Query: 343 SKGIIDP---AVLSALYNDLNTVSAIQALHKLARE----------------STKNHDLLP 383
            + +I+      L  + +DL+T +A+  L KL ++                  K  D + 
Sbjct: 365 DQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQ 424

Query: 384 IFNAS-------AHILGI-------EVCKEHLNKNISIAIEKL---VQERLILLKMKKFS 426
              A          ILG+       E  K+   K   +  E+L   +++R +  K K F+
Sbjct: 425 ALVALQNEVTDKLSILGLMPMSSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFA 484

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +D IR +L + G  L            T W+
Sbjct: 485 ESDRIRTELSALGIALM------GEPTGTLWR 510


>gi|255262212|ref|ZP_05341554.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255104547|gb|EET47221.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 460

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 188/452 (41%), Positives = 254/452 (56%), Gaps = 16/452 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+++NT  R   +F  +DP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 1   MTIRLHNTKTRTKEDFTPLDPDNVRMYVCGPTVYDRAHLGNARPVLVFDVLYRLLRHTYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK---NTQQFVKDTTRLACLAP 119
              VTYVRN TD+DDKI   A     +        +I  +       ++ D   L  L P
Sbjct: 61  ADHVTYVRNFTDVDDKINATALARQEAGAKGSLEDLIAERSDETISWYLADMGALGALEP 120

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            H PRAT +I  M+ +I+ +I  GHAY      +F   S   YG+ S R +D+   G RV
Sbjct: 121 NHAPRATAYIAPMVAMIEGLIEGGHAYAKEGHALFRVRSYKEYGALSGRSVDDMIAGARV 180

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF+LWK ST  +PGW+SPWGRGRPGWHIECSAM+   LG  FDIHGGG D
Sbjct: 181 EVAPFKEDPMDFVLWKPSTEDQPGWDSPWGRGRPGWHIECSAMAYDLLGPAFDIHGGGND 240

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS C       A +W+HN  L +EG+KMSKS GNF T+ +LL+      
Sbjct: 241 LQFPHHENEIAQSKC--CGHDFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------ 292

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALYN 357
           +  P  VIR  ML THYR+P+D+T ++  EAE  L KW + +   +  +       AL +
Sbjct: 293 QGVPGEVIRFVMLSTHYRKPMDWTDKKRAEAETTLRKWRKLTDGVALDMGQERASDALAD 352

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL-NKNISIAIEKLVQER 416
           D+N    I  +H LA +   +   L    A   +LG  +    +   ++   +E     R
Sbjct: 353 DVNVSEVIMRMHSLASQG--DAAALKATGAMIGLLGDNIGDWVVGGADLQAYVELFNATR 410

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
               + K F++ D ++ +L   G  +   K  
Sbjct: 411 SAATENKDFAAVDALKARLTEAGVEVRMSKEG 442


>gi|307564821|ref|ZP_07627349.1| cysteine--tRNA ligase [Prevotella amnii CRIS 21A-A]
 gi|307346543|gb|EFN91852.1| cysteine--tRNA ligase [Prevotella amnii CRIS 21A-A]
          Length = 495

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 165/500 (33%), Positives = 239/500 (47%), Gaps = 59/500 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   ++ MYVCGPTVY   H+G+ARP I FD+L+R L++   
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T  +     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIAKKARLEQLEPM------EIAQHYTNSYHDAMH 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L P+ +P AT HI +   L++ II +G+AY++N  + FD +       YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEQLVEEIINNGYAYQSNGSVYFDVAKFNEKHKYGVLSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    +R       K+N  DF LWKR+ P     W S W  G PGWH EC+AM   YL
Sbjct: 174 LNDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSQWSEGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DL+FPHHE EIAQ+  A + +     W+HN  + + G+KM KS GNFIT
Sbjct: 234 GNHFDIHGGGIDLVFPHHECEIAQA-VASQGDDMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------- 338
           +NE    K     +++    IR  ++  HYR  +DF+   L  A+    K          
Sbjct: 293 LNEFFSGKHKSLDQAYSPMTIRFFIISAHYRSTVDFSNDALKAAQKGYEKLMNGIEDLKK 352

Query: 339 -QTSTSKGIIDPAV--------LSALYNDLNTVSAIQALHKLAREST------------K 377
            QTST                   A+ +DL T + I  L +                   
Sbjct: 353 IQTSTESDANTKMFVNSLRKKCYDAMNDDLMTPAVISLLFEACHVINLLIDHKAQISLSD 412

Query: 378 NHDLLPIFNASA-HILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
           + +L  + N  A  ILG+   +    E   +     ++ +++ R      K ++ +D IR
Sbjct: 413 SKELTEVMNIFAFDILGLRNERSINNEAREEAFGKVVDMVLELRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQ 452
             L   GF ++D K+  + +
Sbjct: 473 NALSEAGFQVKDTKDGVSWK 492


>gi|30316165|sp|Q8FMI8|SYC_COREF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 459

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/476 (31%), Positives = 236/476 (49%), Gaps = 45/476 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R + EF  + P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 1   MTLRIFDTATRTLREFIPLKPGHASVYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               S   ++F      L  L P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILTKAAEH------GRPWWEWVSTYEREFTWAYNTLGVLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
           PRAT H+ QM+  +Q +I +G AYE N  + FD ++       +YGS S  ++++ + G 
Sbjct: 113 PRATGHVTQMVQYMQRLIDNGFAYEVNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQGE 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              + + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIH GG
Sbjct: 173 T--DNFGKRGPQDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATYYLGAEFDIHCGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQ+  A      A  W+HN ++ + G KMSKS GN +++  +LE  + 
Sbjct: 231 LDLQFPHHENEIAQAHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSVPNMLEKVR- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVL 352
                    +R  +   HYR  ++++   LTEA     +        G ++         
Sbjct: 288 ------PVELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEAFVDRVGEVEVGTWTAGFE 341

Query: 353 SALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLNK 403
           +A+  DL    A+  +H   RE           K  +L     A   +LG +  +     
Sbjct: 342 AAMDEDLAVPKALAEIHNAVREGNSALAAGEMEKARELAGAVRAMTGVLGFDPVEWGTQT 401

Query: 404 NISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           + S A E L       ++ R      K ++ AD +R +L + G  + D  +  + +
Sbjct: 402 DDSAAHEALEVLVHAELERRATARAEKDWAVADEVRDRLAAAGIEVVDTADGVSWK 457


>gi|310815554|ref|YP_003963518.1| cysteinyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754289|gb|ADO42218.1| cysteinyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 453

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 202/461 (43%), Positives = 269/461 (58%), Gaps = 28/461 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I ++NT  R+   F  ++P+N+R+Y+CGPTVYD AH+GNARP++VFDVL RLLR+ YG
Sbjct: 2   TQITLHNTKTRQTEVFVPLNPANVRLYLCGPTVYDRAHLGNARPVLVFDVLVRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTY RN TD+DDKI +RA           +I  IT +    +  D   L    P  +
Sbjct: 62  ADAVTYARNFTDVDDKINDRAAA------TGRSIRDITDETIGWYHADMDALGADRPDLE 115

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+ IP M+ +I  +I  GHAY     ++F   S  +YG+ S R +++   G RV   
Sbjct: 116 PRATDWIPAMVEMITGLIDRGHAYATEGHVLFAVDSYADYGALSGRSVEDMIAGARVEVA 175

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   +PGW+SPWG GRPGWHIECSAMS   LG  FDIHGGG+DL F
Sbjct: 176 PFKRNPMDFVLWKPSDTDQPGWDSPWGHGRPGWHIECSAMSYGLLGASFDIHGGGIDLQF 235

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQSCCA      A  WIHN  L +EGRKMSKS GNF T+ +LL+      +  
Sbjct: 236 PHHENEIAQSCCAHPEASFARYWIHNEMLQVEGRKMSKSLGNFFTVRDLLD------QGV 289

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAVLSALYNDLN 360
           P  VIRL ML THY  P+D+T  +   AE  L KW       + G IDP V++AL ++LN
Sbjct: 290 PGEVIRLVMLGTHYSRPMDWTEDKRLTAEGALRKWRALTAGAAPGAIDPEVITALADNLN 349

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK----EHLNKNISIAIEKLVQER 416
           T  AI ALH+LA              ASA +LG+           + + +  ++ L+ +R
Sbjct: 350 TAGAISALHRLANAGDAGG-----LLASAQMLGLLQDGMGDWLAASGDDAALVDGLLADR 404

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 + F++AD IR +L + G +L+D         +T W
Sbjct: 405 AAAKAARDFAAADAIRDRLVAAGVVLKDKPGG-----VTEW 440


>gi|25029072|ref|NP_739126.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259505936|ref|ZP_05748838.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
 gi|23494359|dbj|BAC19326.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
 gi|259166417|gb|EEW50971.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
          Length = 479

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/474 (32%), Positives = 236/474 (49%), Gaps = 45/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R + EF  + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 23  LRIFDTATRTLREFIPLKPGHASVYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGLD- 81

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +               S   ++F      L  L P+ +PR
Sbjct: 82  -VAFVRNVTDIDDKILTKAAEH------GRPWWEWVSTYEREFTWAYNTLGVLPPSVEPR 134

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRV 179
           AT H+ QM+  +Q +I +G AYE N  + FD ++       +YGS S  ++++ + G   
Sbjct: 135 ATGHVTQMVQYMQRLIDNGFAYEVNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQGET- 193

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            + + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIH GGLD
Sbjct: 194 -DNFGKRGPQDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATYYLGAEFDIHCGGLD 252

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQ+  A      A  W+HN ++ + G KMSKS GN +++  +LE  +   
Sbjct: 253 LQFPHHENEIAQAHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSVPNMLEKVR--- 307

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA 354
                  +R  +   HYR  ++++   LTEA     +        G ++         +A
Sbjct: 308 ----PVELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEAFVDRVGEVEVGTWTAGFEAA 363

Query: 355 LYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           +  DL    A+  +H   RE           K  +L     A   +LG +  +     + 
Sbjct: 364 MDEDLAVPKALAEIHNAVREGNSALAAGEMEKARELAGAVRAMTGVLGFDPVEWGTQTDD 423

Query: 406 SIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           S A E L       ++ R      K ++ AD +R +L + G  + D  +  + +
Sbjct: 424 SAAHEALEVLVHAELERRATARAEKDWAVADEVRDRLAAAGIEVVDTADGVSWK 477


>gi|169627674|ref|YP_001701323.1| cysteinyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169239641|emb|CAM60669.1| Cysteinyl-tRNA synthetase [Mycobacterium abscessus]
          Length = 479

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 160/480 (33%), Positives = 228/480 (47%), Gaps = 50/480 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T    + +F  + P  + +Y+CG TV    HIG+ R  + FDVL R L     +
Sbjct: 6   PLRLYDTRVGAVRDFVPLQPGTVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLSARAYD 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN+TDIDDKI+ +A                 +   + F +    L  L P+  P
Sbjct: 66  --VLFVRNVTDIDDKILNKAAD------AGRPWWEWAATYERAFDEAYESLGVLPPSVSP 117

Query: 124 RATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           RAT HI QMI LI  +I  GHAY    E   ++ FD  S P YG  S  KID+   G  V
Sbjct: 118 RATGHITQMIELIDRLIERGHAYRDLREGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGV 177

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF LWK + P EP W +PWG GRPGWH+ECSAM+  YLG  FDIH GG+D
Sbjct: 178 A--TGKRDPRDFTLWKGAKPGEPSWPTPWGPGRPGWHLECSAMARTYLGPSFDIHCGGMD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQSC A      A  W+HNG++ + G KMSKS GN ++I  +L+  +   
Sbjct: 236 LVFPHHENEIAQSCAAGDG--FARYWMHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR--- 290

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPA 350
               A  +R  +   HYR  ++++   L +A              +        G   PA
Sbjct: 291 ----AVELRYYLGSAHYRSMLEYSETALADAVKAYCGIEDFLHRVRIRVGDVPVGTWTPA 346

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL 401
             +AL +DL+   A+  +H    +  +  D               A   ILG +   E  
Sbjct: 347 FAAALDDDLSVPIALAEVHSTRADGNRALDAGDHEGALSAAASIRAMMSILGCDPLDERW 406

Query: 402 N---------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                       + + +   +Q R      K ++ AD IR +L+  G  + D  +     
Sbjct: 407 ETRDETSAALNAVDVLVTAELQRRETARTEKNWALADEIRDRLKRAGLEITDTADGPQWT 466


>gi|227485588|ref|ZP_03915904.1| cysteinyl-tRNA synthetase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236454|gb|EEI86469.1| cysteinyl-tRNA synthetase [Anaerococcus lactolyticus ATCC 51172]
          Length = 472

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 172/489 (35%), Positives = 250/489 (51%), Gaps = 56/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL R    F+ I+ + I+MYVCGPTVYD+ HIGNARP+++FD   R + Y   + 
Sbjct: 1   MKIYNTLSRTKEVFKPIEENKIKMYVCGPTVYDYMHIGNARPLVIFDTFRRFMTYRGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            VTYV N TD+DDKII+++  E            +T +   Q++ D   L      T  P
Sbjct: 60  -VTYVVNFTDVDDKIIKKSIVE------GITTKEVTDRYIAQYMIDAKALNLDEEDTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RV 179
           RAT  +  +I  ++ +I  G AY ++ ++ FD S   +YG  SR+ +D+   G       
Sbjct: 113 RATEVMDDIINFVKGLIDKGMAYVSDGDVYFDVSKKTDYGKLSRKNLDDLVHGASQRLDD 172

Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +   KKNPADF LWK +    E  W+SPWG+GRPGWHIECS M+   LG   DIH GG 
Sbjct: 173 NDAGKKKNPADFTLWKATKLSGEVAWDSPWGKGRPGWHIECSTMNKKILGDTIDIHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS   + ++  AN W+HNG + + G KMSKS GNF T++++       
Sbjct: 233 DLEFPHHENEIAQSEALNDVK-FANYWMHNGMIQVNGSKMSKSVGNFFTLDDI------- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------- 347
            + +    IR  +L T YR+PI+FT + + +A+  L +          +           
Sbjct: 285 KKEYDLMTIRFWLLTTSYRQPINFTKEIIDQAQASLDRLNNAYFKAEELLAKTSEKEISS 344

Query: 348 ------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIF 385
                       +   +S + +DLNT  AI  L  LA+    N +              +
Sbjct: 345 VEKDLLQILVDKENEFVSVMEDDLNTADAITVLFDLAKFINTNLEGDSSKDFVEKTFETY 404

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +    +LG+   K+  ++     IE+ + ER    K K F+ AD IR  L+  G IL+D 
Sbjct: 405 SRLYDVLGLLAKKKE-SEVDEAFIEEKIAERNSAKKAKDFAKADKIRDDLKEMGIILKDT 463

Query: 446 KNPDNGQRM 454
           +     +  
Sbjct: 464 REGTKWEIG 472


>gi|254450306|ref|ZP_05063743.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264712|gb|EDY88982.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 468

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 201/462 (43%), Positives = 264/462 (57%), Gaps = 34/462 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT  RK  EF  ID +N+RMYVCGPTVYD AH+GNARP+IVFD L+RLLRY YG  
Sbjct: 3   IKLYNTKVRKKVEFSPIDENNVRMYVCGPTVYDRAHLGNARPVIVFDTLFRLLRYTYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK---NTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A     +       ++I  +       +++D   +  L PT 
Sbjct: 63  HVTYVRNFTDVDDKINATALARQQAGAAGTLENLIAERSDETIGWYLEDMAAVGALEPTE 122

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT +I QMI +I+++I   HAYEA    +F   S   YG+ S R +D+   G RV  
Sbjct: 123 MPRATQYIAQMIAMIKDLIAKEHAYEAEGHALFRVRSYAEYGTLSGRSVDDMIAGARVEV 182

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++P DF+LWK S+  +PGW+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL 
Sbjct: 183 APYKEDPMDFVLWKPSSDDQPGWDSPWGHGRPGWHIECSAMALDLLGDAFDIHGGGNDLT 242

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+ +LL+      + 
Sbjct: 243 FPHHENEIAQSTCAGHG--FANVWMHNEMLQVEGKKMSKSLGNFFTVRDLLK------QG 294

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYND 358
            P  VIR  ML THYR+P+++T ++  EAE  L KW      S  K I+ P  + A+ +D
Sbjct: 295 VPGQVIRFVMLSTHYRKPMNWTEKKRVEAERTLRKWFAAIRLSAPKAIVSPEFIKAVSDD 354

Query: 359 LNTVSAIQALHK--LARESTKNHDLLPIFNASAHILGIEVCKEHLN-----------KNI 405
           LN+  AI  LH+   A E       L    A    LGI +  +  N              
Sbjct: 355 LNSPQAIAVLHQHFAAGE-------LDNLKAGLEFLGISIEFDLENIFYGNMDNLNYLTF 407

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +    +L+  R+  ++   FS  D  +  L + G  +   K 
Sbjct: 408 ADPEHELMNLRIDAMQSNDFSEVDRYKAMLMAAGAEVRMSKG 449


>gi|145296638|ref|YP_001139459.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|166200145|sp|A4QH41|SYC_CORGB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|140846558|dbj|BAF55557.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 460

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/485 (31%), Positives = 241/485 (49%), Gaps = 52/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R + +F+ + P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 1   MTLRIFDTGTRTLRDFKPVQPGHASVYLCGATPQSSPHIGHVRSAVAFDILRRWLMAKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               S   ++F      L  L P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILTKASEN------GRPWWEWVSTYEREFTWTYNTLGVLPPSTE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGT 177
           PRAT H+ QMI  +Q +I +G AY  +  + FD ++       +YGS S  ++++ + G 
Sbjct: 113 PRATGHVTQMIEYMQRLIDNGFAYAVDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQGE 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P+ + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG+ FDIH GG
Sbjct: 173 --PDNFGKRGPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATYYLGEQFDIHCGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQ+  A   +K AN W+HN ++ + G KMSKS GN + + E+L     
Sbjct: 231 LDLQFPHHENEIAQAHAA--GDKFANYWMHNHWVTMAGEKMSKSLGNVLAVPEML----- 283

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVL 352
             +      +R  +   HYR  ++++   L+EA +   +        G ++     P   
Sbjct: 284 --KQVRPVELRYYLGSAHYRSVLEYSESALSEAAVGYRRIESFLERVGDVEVGEWTPGFE 341

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKE---- 399
           +A+  D+    A+  +H   RE     D         L     A   +LG +  +     
Sbjct: 342 AAMDEDIAVPKALAEIHNAVREGNAALDKGDREAAKKLASSVRAMTGVLGFDPVEWGSDA 401

Query: 400 ----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +K + + I   ++ R      K ++ AD +R +L   G  + D  +        
Sbjct: 402 GADGKADKALDVLISSELERRATARAEKNWTVADEVRDRLADAGIEVVDTAD------GA 455

Query: 456 RWKQK 460
            WK +
Sbjct: 456 TWKLQ 460


>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 504

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 180/506 (35%), Positives = 252/506 (49%), Gaps = 68/506 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I+++NT+  +    Q   P  + +YVCGPTVY + HIGNAR    FDV+ R LR+  
Sbjct: 18  PPAIRLFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRG 77

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V YVRN TD+DDKII+ A +        +A   + ++  + F +DT  L  L P  
Sbjct: 78  LK--VRYVRNFTDVDDKIIKAAAE------TGEAPVELAARYVEIFREDTRALHLLEPDF 129

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PR ++H+P++I +IQ ++  GHAY +  ++ F  SS  +Y   S+R +DE  +G RV  
Sbjct: 130 SPRVSDHLPEIIAIIQKLVDKGHAYASQGDVYFSVSSDEDYAKLSKRNLDELCVGERVQP 189

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS+ YLG+ FDIHGG LDLI
Sbjct: 190 GEQKREPLDFALWKAAKPGEPAWESPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLI 249

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A+ +   A  W+H GFL+LEG KMSKS GN + + + L         
Sbjct: 250 FPHHENEIAQSESANGV-TFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALT-------K 301

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
                +R   L THYR P+ F+ + L +AE  +  + +T                     
Sbjct: 302 VDPEALRFFFLATHYRHPLSFSDKALADAETRMEYFYETLRKVDERISGKDFGKGPLHGD 361

Query: 347 ---IDPAVLSALYNDLNTVSAIQA---LHKLARESTKN-------------HDLLPIFNA 387
                    SA+ +D NT   + +   L  +  E T               H L      
Sbjct: 362 PQRFFTEFESAMDDDFNTAGGLGSLSGLFGMMNELTDKPPVKDKALVGRTLHALREDVRR 421

Query: 388 SAHILGI--EVCKEHL----------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            + +LG+  +     L                 +E+L+ ER      K F++AD +R +L
Sbjct: 422 VSSVLGLFEDAPDAWLLRRRERAVRERGIDVAEVERLLGERTAARAAKDFAAADRVRSEL 481

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQKP 461
           + KG  + D          T WK  P
Sbjct: 482 KEKGVEIMDT------PAGTTWKVAP 501


>gi|313204739|ref|YP_004043396.1| cysteinyL-tRNA synthetase [Paludibacter propionicigenes WB4]
 gi|312444055|gb|ADQ80411.1| cysteinyl-tRNA synthetase [Paludibacter propionicigenes WB4]
          Length = 488

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 157/490 (32%), Positives = 223/490 (45%), Gaps = 41/490 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + IYNTL RK  +F  +    + MYVCGPTVY   H+GN R  I FD++YR L Y 
Sbjct: 1   MEHNLYIYNTLSRKKEQFIPLHEDRVGMYVCGPTVYSDVHLGNCRTFISFDLIYRYLLYL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      +R   +                I  K T  F         
Sbjct: 61  GYK--VRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLEPMEIVQKYTVGFHDVLNVFNT 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P AT HI + I +++ I+  G+AYE    + FD         YG  + RK+++ 
Sbjct: 119 LPPSIEPTATGHISEQIEMVKAILESGYAYEIEGTVYFDVEKYNKDLPYGILTNRKLEDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
             GTR    +  KK   DF LW ++ P     W SPWG G PGWHIECSAMS+ YLG  F
Sbjct: 179 LEGTRELGGQDEKKGRLDFALWIKAKPETLMQWPSPWGWGFPGWHIECSAMSTKYLGATF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL   HH NEIAQS   + +      W+H   L + G +MSKS GN     EL
Sbjct: 239 DIHGGGMDLQATHHTNEIAQSQACNHVAP-VKYWMHTNMLTVNGVRMSKSAGNGFLPKEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                    R +    +R  M  +HYR  +DF+ + L  +E    +          +  +
Sbjct: 298 FTGAHPLLERGYSPMTVRFFMAQSHYRSTLDFSNEALQASEKGFERLMDGYARLQKLQAS 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
                           A+ +D NT  AI  L    +     HD     +A          
Sbjct: 358 TASSVYTSSLRSKCEEAMNDDFNTPIAIAHLFDALKAINLIHDGKETISAKDLEELKSVF 417

Query: 388 ---SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                 +LG+  EV     ++    A++ L+  RL   + K ++++D IR +L + GF +
Sbjct: 418 KVFIEDVLGLKSEVATSGGSEAYKGAVDLLLNMRLAAKQNKDWATSDKIRNELTALGFEI 477

Query: 443 EDYKNPDNGQ 452
           +D K+    +
Sbjct: 478 KDTKDGFEWK 487


>gi|332521572|ref|ZP_08398025.1| cysteinyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
 gi|332042661|gb|EGI78861.1| cysteinyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
          Length = 493

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 162/487 (33%), Positives = 232/487 (47%), Gaps = 41/487 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            ++IKIYN+L  K   F++I+   + MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   NQQIKIYNSLTGKKEPFKSINEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMVFRYLKHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D  +   +    +         I  + T  F         L
Sbjct: 66  YK--VRYVRNITDAGHLENDADVGEDKITKKARLEEIEPMEIVQRYTVDFHNVINTFNLL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQK 174
            P+ +P AT HI + I LI  II +G  Y  N  + FD        +YG  S+RK+++  
Sbjct: 124 PPSIEPTATGHIIEQIELINAIIENGFGYVVNGSVYFDVHKYNETNDYGILSKRKLEDLI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  KKNP DF LWK++ P     W SPW  G PGWH+EC+AMS+ YLG  FD
Sbjct: 184 HNTRALDGQSDKKNPQDFALWKKAEPTHIMRWPSPWSDGFPGWHLECTAMSTKYLGNQFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+  A       N W+H   L L G +MSKS GN I   ELL
Sbjct: 244 IHGGGMDLKFPHHECEIAQNQAALGQSP-VNYWMHANMLELNGARMSKSTGNIINPAELL 302

Query: 293 ETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA- 350
             K     +++   V+R  M+ + YR  +D T   L  +E   ++          +  A 
Sbjct: 303 SGKNNIMSKAYNPSVVRFFMMQSAYRSVLDLTDNGLLASEKGFNRLMNAVADIEKLKTAN 362

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
                          A+ +D NT   I  L +   +     +            L  +FN
Sbjct: 363 QTNFDIQAWKQSCYDAMNDDFNTPILIANLFEGVNQVNAIKEGSKTITTEDLKTLKDVFN 422

Query: 387 AS-AHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                ILG++  +E     + +S A+E L++ R      K F+ +D IR +L + G  L 
Sbjct: 423 IFVFDILGLKNNQESGAGTEKLSGAVELLIKLRQEARANKDFALSDKIRDELAAVGITLN 482

Query: 444 DYKNPDN 450
           D +    
Sbjct: 483 DSREGTT 489


>gi|256546103|ref|ZP_05473456.1| cysteine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398220|gb|EEU11844.1| cysteine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 472

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 172/494 (34%), Positives = 254/494 (51%), Gaps = 60/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  R+  EF+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R L+Y     
Sbjct: 1   MKIYNTFTRQKEEFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLKYLG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V YV N TD+DDKII +A      I    +   +T K  + +++D   L      T  P
Sbjct: 59  DVKYVVNFTDVDDKIINKA------IKDKISTKEVTDKYIKAYMEDAKDLNLDEEHTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RV 179
           +AT  +  +I  ++ ++    AYE+N ++ FD S   +YG  S + I++ + G       
Sbjct: 113 KATETMDDIIEFVKELVDKDCAYESNGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDD 172

Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +K  K+NP DF LWK +    E  W+SPWG+GRPGWHIECS MS   LG+  D+H GG 
Sbjct: 173 KDKGKKRNPMDFTLWKATKKEGEVSWDSPWGKGRPGWHIECSTMSKKLLGETIDLHAGGE 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS      +K AN W+HNG + ++G KMSKS GNF T++++       
Sbjct: 233 DLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------- 341
            + +   V+R  +L   YR PI+FT + + +A+  L +                      
Sbjct: 285 KKEYDLMVVRFWLLSASYRLPINFTREIIEQAKNSLERLNNAKFRMDDLLEKTSGNLKDE 344

Query: 342 -----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
                      +      + +DLNT  A+  L ++++ +    D             +F 
Sbjct: 345 EKDLVKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKLDENSSKEFVEKTRDLFI 404

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               +LGIE  K+  +      I KL++ER    K K F  AD IR +L   G +++D +
Sbjct: 405 KLEDVLGIENRKKTDDSIDEDLINKLIEERKEAKKAKDFKKADEIRDKLSEMGILIKDTR 464

Query: 447 NPDNGQRMTRWKQK 460
                   T+W+ K
Sbjct: 465 ------EGTKWELK 472


>gi|38234535|ref|NP_940302.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|61216541|sp|Q6NFC3|SYC_CORDI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|38200798|emb|CAE50502.1| Putative cysteinyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 463

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 151/479 (31%), Positives = 235/479 (49%), Gaps = 48/479 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R + +F+ I P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 1   MTLRIFDTGTRSLRDFEPIRPGHASIYLCGATPQTQPHIGHVRSGVAFDILRRWLIAQGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               S   ++F     +L  L P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILTKAAEN------GRPWWEWVSTYEREFTWAYNQLGVLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
           PRAT H+ QM+  +Q +I +G AY A   + FD ++       +YGS S  +++E + G 
Sbjct: 113 PRATGHVTQMVEYMQRLIDNGFAYAAEGSVYFDVAAWTAAEGSDYGSLSGNRVEEMEQGE 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+   DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIH GG
Sbjct: 173 T--EITGKRGAHDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATWYLGGEFDIHCGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQS  A      AN W+HN ++ + G KMSKS GN +++  +L+  + 
Sbjct: 231 LDLQFPHHENEIAQSHAAGDG--FANYWMHNHWVTMSGEKMSKSLGNVLSVPNILDKVR- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----AVL 352
                    +R  +   HYR  ++++   L EA     +     T    ++         
Sbjct: 288 ------PVELRYYLGSAHYRSMLEYSEGALLEAAAGYRRIEAFLTKVADVEAGQWTTEFE 341

Query: 353 SALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHL-- 401
            A+ +DL    A+  +H   R            K H++     A A +LG++   E    
Sbjct: 342 EAMNDDLAVPRALAEIHTQVRHGNSALAAGDVDKAHEIAASVRAMAAVLGVDPLDEKWLD 401

Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                   N  + + ++  +Q R      K +++AD +R +L + G  + D  +     
Sbjct: 402 SAASDSSTNAALDVLVQAELQRRTEARAAKDWATADEVRDRLHAAGITVTDTPDGPTWA 460


>gi|226356626|ref|YP_002786366.1| cysteinyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226318616|gb|ACO46612.1| putative cysteine--tRNA ligase (Cysteinyl-tRNA synthetase)
           [Deinococcus deserti VCD115]
          Length = 491

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 175/498 (35%), Positives = 241/498 (48%), Gaps = 57/498 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I +Y+TL+R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R   +  
Sbjct: 11  DPNIFLYDTLQRQKVRFTPTTPGRVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRAFLHLG 70

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YV NITD+    +D      +    +         +  K    FV+D   L  L
Sbjct: 71  YQ--VRYVGNITDVGHLQNDADEGEDKIAKRAALEQLEPMEVADKYFWSFVRDMEALNIL 128

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+  PRAT HI + I LI+ +I  GHAYE+   + FD  S P YG  S RK+DEQ+ GT
Sbjct: 129 KPSINPRATGHITEQIRLIEELIERGHAYESQGSVYFDVRSWPEYGKLSGRKLDEQEEGT 188

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           R   +  K++P DF LWKR+       WESPWG G PGWHIECSAMS  YLG+ FDIHGG
Sbjct: 189 REVVREEKRDPRDFALWKRAEAGHIMRWESPWGVGFPGWHIECSAMSLKYLGEGFDIHGG 248

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHE EIAQS  A      A  W+HN  L + G KMSKS GNF TI ELLE   
Sbjct: 249 GLDLQFPHHEAEIAQSEAA--GHAFARYWMHNNMLTIGGEKMSKSKGNFTTIAELLEKH- 305

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSK 344
                    V+R  ++ +HYR   +F+ +    A     +  +T            + + 
Sbjct: 306 ------DPMVVRFLLVGSHYRSVTEFSEEAFESARNGYRRLTETLHEVGRRLQGAPAGAT 359

Query: 345 GIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKN-------HDLLPIFNAS-- 388
             +D        A   AL +D NT  A+ AL  L  +            D L     +  
Sbjct: 360 EALDARVQAHTHAFEDALRDDFNTPKAVAALFGLTGDVNAALASGPVGQDTLNRVQEAYM 419

Query: 389 ---AHILGIEVCKEHLNKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFI 441
                +LG+        ++ +  ++ L++     R      K+++ AD +R  L   G  
Sbjct: 420 ALGGGVLGLFHASASERQDDTQVVDTLMELVLKARQHYRLSKQYAQADELRDTLARVGVT 479

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           +ED K+        RWK+
Sbjct: 480 VEDTKD------GVRWKR 491


>gi|332826849|gb|EGJ99649.1| cysteinyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
          Length = 489

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 165/504 (32%), Positives = 250/504 (49%), Gaps = 59/504 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL R    F+ +   ++ MYVCGPTVY  AH+G+AR  + FD+L+R L++ 
Sbjct: 1   MEQKLSVYNTLTRTKEVFEPLHAPHVGMYVCGPTVYSDAHLGHARHGVTFDLLFRYLQHI 60

Query: 61  YGEKCVTYVRNITDID----------DKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+           DKI ++AR E            +    + ++ K 
Sbjct: 61  GYK--VRYVRNITDVGHLENEEGSGEDKISKKARLEQLEPM------EVVQYYSNRYHKV 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
              L  L P+ +P A+ HI + I  I+ I+ +G+AYE+N  + FD        +YG  S 
Sbjct: 113 MDDLNTLPPSIEPHASGHIIEQIESIKEILKNGYAYESNGSVYFDVEKYNKDYDYGILSH 172

Query: 168 RKIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R I+E    TR    +  K +  DF LWK++ P     W SPW  G PGWH+ECS MS  
Sbjct: 173 RNIEEMLNTTRELDGQDEKHSKVDFALWKKAAPEHIMRWPSPWSDGFPGWHLECSTMSIK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLGK FDIHGGGLDL+FPHHE EIAQ+  A    +    W+HN  + + G+KM++S GNF
Sbjct: 233 YLGKEFDIHGGGLDLMFPHHECEIAQN-TAMEKHQVVKYWMHNNMITIAGQKMARSLGNF 291

Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           IT+ +L         +++    +R  +L  HYR  +DF+ + L  AE  L +        
Sbjct: 292 ITLEQLFAGNHDLLEKAYSPMTVRFFILQAHYRSTVDFSNEALQAAEKSLERLLDSYGRL 351

Query: 340 --------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------H 379
                   +S     I      A+ +D+N+   I  L + +                   
Sbjct: 352 DKVAISDTSSVDVKSIRQKCYDAMNDDMNSAVVIAHLCEASTTINSAIAGNIKLTKEDIT 411

Query: 380 DLLPIFN-ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
           +L  +F+     +LGI  E    + N+    A++ L+  R    + K ++++D IR +L 
Sbjct: 412 ELKDVFDIFLFSVLGIRNEASLTNNNEAFGKAVDLLLDIRQKAKENKDWATSDQIRNELA 471

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
             GF ++D K+         WK K
Sbjct: 472 KAGFEIKDGKDGAE------WKLK 489


>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 491

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 176/501 (35%), Positives = 259/501 (51%), Gaps = 75/501 (14%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           ++++   FQ I P  + MYVCG T YD++HIG+AR  + FDVL+R L+    +  VTYVR
Sbjct: 1   MKKQKEVFQPIVPGKVSMYVCGVTTYDYSHIGHARVYVAFDVLFRYLKSVGYD--VTYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TDIDDKII+RA +      + +    ++ +   +F  D   L CL P  +PR ++HIP
Sbjct: 59  NFTDIDDKIIKRANE------VGEDPLNLSRRFCDEFQVDMELLRCLPPNVEPRVSDHIP 112

Query: 131 QMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
           Q+I +I  II + + Y     ++ F+  ++P YG  S RK +E + G RV     K+NPA
Sbjct: 113 QIIKMISQIIENKNGYVMEGGDVYFEVDTLPTYGCLSGRKQEENRAGERVLVDNRKRNPA 172

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK + P EP W+SPWG GRPGWHIECSAMS+ +LG  FDIHGGG+DLIFPHHENEI
Sbjct: 173 DFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSAEHLGHKFDIHGGGMDLIFPHHENEI 232

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQSC A    +    W+HNGF+ ++  KMSKS GNF TI E+LE        +    +R 
Sbjct: 233 AQSCAACADSR-VGYWLHNGFVTVDNEKMSKSVGNFFTIREVLEL-------YHPLALRW 284

Query: 310 AMLMTHYREPIDFTVQRLTEAEIL------------------LSKWPQTSTSKGIID--- 348
            +L THYR P++++ ++L  A                     + K    + SK  I+   
Sbjct: 285 FLLGTHYRAPVNYSKRQLEVASDRVFYIFQTLVDCEQILSQQVDKVAACNPSKEAIELVK 344

Query: 349 ---PAVLSALYNDLNTVSAIQAL---HKLARESTKNHD-------------LLPIFNASA 389
                  +++ +DLNT   + +     K   +                   L+       
Sbjct: 345 SIKNTFRTSMADDLNTPVVVASFSESFKFMNDLMHTRKGRKDKTRLVSLQLLITEIQEVM 404

Query: 390 HILG---------IEVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLES 437
           ++LG         ++  +    K   +++  L   +QER    + K ++ +D IR +L +
Sbjct: 405 NVLGFQIPSYSKVLDEIRALALKRAGMSMNDLAARLQERASAREAKDYARSDQIRLELAA 464

Query: 438 KGFILEDYKNPDNGQRMTRWK 458
            G  L D  +       T W+
Sbjct: 465 AGIGLMDGGD------GTLWR 479


>gi|332291036|ref|YP_004429645.1| cysteinyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169122|gb|AEE18377.1| cysteinyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
          Length = 494

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/488 (31%), Positives = 233/488 (47%), Gaps = 42/488 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +++ +YN+L  K   F+ +    + MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   DQELTVYNSLSGKKELFKPLLEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHLG 65

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD      +  + E                +  K T  F     +   L
Sbjct: 66  YK--VRYVRNITDAGHLTDDADQGEDKIAKKARLEKIEPMEVVQKYTLDFHDILNKFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P+ +P AT HI + + +I+ II +G+AYE N  + FD         YG  S RK+++  
Sbjct: 124 PPSIEPTATGHIIEQMEIIKKIIDNGYAYEKNGSVYFDVVKFNKDHEYGKLSGRKLEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K+NP DF LWK++ P     W SPWG G PGWH+EC+AMS+ YLG  FD
Sbjct: 184 ANTRTLNAQDEKENPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKYLGDQFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+  A   E     W+H   L L G+KM+KS GN I   E+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQNEAALGTEP-VRYWLHANMLTLNGQKMAKSTGNSINPGEIF 302

Query: 293 ETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------P 338
               +   + +   V R  +L T YR  +DF+   L  +E    +               
Sbjct: 303 SGDSEHLSKGFAPSVARFFILQTSYRSIMDFSNDALLASEKGFHRLMEALKIAKNLTVSK 362

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE---------STKNHDLLPIFNAS- 388
           ++S        +  +A+ +D NT   I  L +  ++         +    DL  + +   
Sbjct: 363 ESSFDVTAWKQSCYNAMNDDFNTPILIAQLFEAVKQIHLIKDGKATITAEDLKLLLDTLE 422

Query: 389 ---AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                +LG+E      +  +  ++  +E L++ R    + K F+ +D IR +L   G  L
Sbjct: 423 AFVFDVLGLEDNNAFAKADDSKLNGTVELLIKLRKEARENKDFALSDKIRDELIELGIQL 482

Query: 443 EDYKNPDN 450
           +D +   +
Sbjct: 483 KDSREGTS 490


>gi|94987050|ref|YP_594983.1| cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082155|sp|Q1MQR5|SYC_LAWIP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94731299|emb|CAJ54662.1| Cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 485

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 173/499 (34%), Positives = 247/499 (49%), Gaps = 67/499 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT+E+K      I    + +YVCG T YDF+HIG+AR  IVFD+L RLLRY   + 
Sbjct: 1   MHLYNTMEKKKEPLIPIISGKLGIYVCGITAYDFSHIGHARSAIVFDILVRLLRYQGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT++RN TDIDDKII RA +E        +   +  +    F +D  RL  L    +P+
Sbjct: 60  -VTFIRNFTDIDDKIINRANKE------GRSSKEVAEEFINAFHEDMDRLGVLNADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT++IP+MI   Q ++    AY  A+ ++ F   S P+YG  S R  DE ++G R+    
Sbjct: 113 ATDYIPEMIECCQKLLEADKAYITASGDVYFRVRSFPDYGKLSGRTPDELRIGVRIVPSE 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK + P EP WESPWGRGRPGWHIECSAMS        DIHGGG+DLIFP
Sbjct: 173 EKEDPLDFVLWKAAKPGEPSWESPWGRGRPGWHIECSAMSEKCWPLPLDIHGGGIDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ+      +  A IW+HNG + +   KMSKS GNF  + ++LE       ++ 
Sbjct: 233 HHENEIAQTESIVN-KPLAKIWMHNGLVQVNSEKMSKSLGNFKIVRDILE-------AYL 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------K 344
              +R  +L  HYR PIDF+ + + E E    +  +                        
Sbjct: 285 PETLRFFLLKKHYRSPIDFSFEGMNETERSQKRVYECIAEVDKALERKSWDSGGSSSSIL 344

Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------- 390
             +D      +SAL +D NT + +  L  +     +  D   +++ +             
Sbjct: 345 AELDEQFSLFMSALEDDCNTAAGLGHLFNIIHIVRRALDDKALYSTTDGKVVFEQFREII 404

Query: 391 -----ILGIEVCKEH------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
                +LG+   K +             NK     +E+L+ +R    + K F  AD +R 
Sbjct: 405 RKVDILLGVFGQKPNSFLQDLKTIRIIRNKIDVNQVEELLSKRRQAREEKNFVQADEVRN 464

Query: 434 QLESKGFILEDYKNPDNGQ 452
            L S G  + D        
Sbjct: 465 TLASLGIEIRDTSEGQVWD 483


>gi|227834035|ref|YP_002835742.1| Cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|227455051|gb|ACP33804.1| Cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 473

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 157/487 (32%), Positives = 237/487 (48%), Gaps = 57/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R   EF+ + P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 2   STLRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  L P+ +
Sbjct: 62  D--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVLPPSVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAY----------EANNEIIFDTSSIP-----NYGSFSR 167
           PRAT  + QM+  +Q +I  G AY          + +  + FD ++       +YGS S 
Sbjct: 114 PRATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSVYFDVAAWNATEGSDYGSLSG 173

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
            +++E + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YL
Sbjct: 174 NRVEEMEQGET--DNAGKRSPQDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYL 231

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++
Sbjct: 232 GGEFDIHCGGLDLQFPHHENEIAQSHAA--GDKFANYWMHNHWVTMAGEKMSKSLGNVLS 289

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----ST 342
           I  +LE  +          +R  +   HYR  ++++   LTEA     +         + 
Sbjct: 290 IANMLEIVR-------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVGKFENV 342

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
            KG   PA   A+ +D+    A+  +H   R   K            L     A A +LG
Sbjct: 343 EKGEWTPAFEEAMNDDIAVPKALAEIHTTVRAGNKALSEGNREEAKRLAGAVRAMAAVLG 402

Query: 394 IEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +   E              + + +   ++ R      K +++AD +R +L + G  + D
Sbjct: 403 FDPLDEQWKDSGEESGAEAALDVLVRAELERRTTARAEKDWATADAVRDRLAAAGITITD 462

Query: 445 YKNPDNG 451
             +    
Sbjct: 463 TADGPTW 469


>gi|325859814|ref|ZP_08172944.1| cysteine--tRNA ligase [Prevotella denticola CRIS 18C-A]
 gi|325482740|gb|EGC85743.1| cysteine--tRNA ligase [Prevotella denticola CRIS 18C-A]
          Length = 495

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 168/506 (33%), Positives = 239/506 (47%), Gaps = 65/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   ++ MYVCGPTVY   H+G+ARP I FD+L+R LR+   
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           + +    +R       K N ADF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 LTDMINNSRELAGVGEKHNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GEHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + +      +   + +    IR  +L  HYR  +DF+ + L  AE    +          
Sbjct: 293 LEQFFTGRHETLTQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLAC 352

Query: 347 IDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKNHD 380
           I  +                    A+ +DL T + I  L +           +      D
Sbjct: 353 IQASAASDGNTGKFVSAFRQKCYEAMNDDLMTPAVISELFEACHLVNILIDHKAQISADD 412

Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIR 432
           L  +  A       ILG++  +   N     A    ++ ++  R      K ++ +D IR
Sbjct: 413 LKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
             L + GF ++D K+         WK
Sbjct: 473 DALSAAGFQVKDTKD------GVTWK 492


>gi|315104398|gb|EFT76374.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
          Length = 490

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 160/488 (32%), Positives = 233/488 (47%), Gaps = 60/488 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L        
Sbjct: 18  KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CSGYR 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT V N+TDIDDKI+ ++                      +       L C  PT++PRA
Sbjct: 76  VTVVANVTDIDDKILAKSAAAGTPWW------AHAYHYENELHAAYKALGCRPPTYEPRA 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE         +
Sbjct: 130 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAEDSDPR 189

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 190 -GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 248

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS  A      A+ W+HN ++ + G KMSKS GN   ++E+ +T     
Sbjct: 249 LRFPHHENELAQSAAA--GRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTKT----- 301

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------QTST 342
             +    +R  +L  HYR  I+F+         L EA   + +             +  T
Sbjct: 302 --YSPRAVRYFLLAPHYRSMIEFSPSDEGTMGSLDEATKAIERIDSFLDRASNLVGEQVT 359

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
           +   +  A ++A+ +DL T  A+ AL     E  K+  +         L    A   + G
Sbjct: 360 ASHELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 419

Query: 394 IEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++             + L   +   +  ++++R      K +++AD IR  L + G  +E
Sbjct: 420 LDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGLTIE 479

Query: 444 DYKNPDNG 451
           D     + 
Sbjct: 480 DTPAGAHW 487


>gi|325106147|ref|YP_004275801.1| cysteinyl-tRNA synthetase [Pedobacter saltans DSM 12145]
 gi|324974995|gb|ADY53979.1| cysteinyl-tRNA synthetase [Pedobacter saltans DSM 12145]
          Length = 486

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 163/495 (32%), Positives = 231/495 (46%), Gaps = 46/495 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + IYNT+ RK  EF+AI+P  + MYVCGPTVY   H+GN R  I FD++YR L + 
Sbjct: 1   MYDSLFIYNTISRKKEEFKAINPPYVGMYVCGPTVYSDVHLGNCRTFISFDLIYRYLMHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      D      +    +   +     I    T  F         
Sbjct: 61  GYK--VRYVRNITDAGHLEGDGDSGEDKISKKAKLASLEPMEIVQTYTNGFHDMMKVFNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I +++ I+  G AYE +  + FD        NYG  + RK+++ 
Sbjct: 119 LPPSIEPTATGHIIEQIEMVKTILAKGLAYEVDGSVYFDVEKYNQHHNYGVLNGRKLEDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K    DF LW ++ P     W SPWG G PGWH+ECSAMSS YLG+ F
Sbjct: 179 LNNTRELGGQDQKHGKLDFALWIKAKPEHLMQWPSPWGMGFPGWHLECSAMSSKYLGEQF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL   HH NEIAQ+  A      AN WIH   L + G+KMSKS GN    +EL
Sbjct: 239 DIHGGGMDLAPTHHTNEIAQNVAACGKHP-ANYWIHTNMLTVNGQKMSKSLGNSFLPHEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
                +   + +   V++  ML  HYR  +DF+ + L  +E    +              
Sbjct: 298 FTGQHELLNKGYSPMVVKFFMLQAHYRSTLDFSNEALDASEKGFKRLMNALGLLDKLKVS 357

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIF 385
                    I+    SA+ +D N+   I  L  + +     +D            L  + 
Sbjct: 358 ETSEVDLKAIEQRFESAMNDDFNSPILIAELFDVVKTINSIYDGKTSISEADLIGLTSLL 417

Query: 386 NASAH-ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N   H ILG++      N+ I   +  L+  R    + K ++++D IR  L+  G+ L+D
Sbjct: 418 NEYVHNILGLKDELSEGNE-IEPLMNFLINIRKEAKEKKDYATSDKIRIGLQEIGYQLKD 476

Query: 445 YKNPDNGQRMTRWKQ 459
            K        T W +
Sbjct: 477 SK------EGTTWSK 485


>gi|237784960|ref|YP_002905665.1| cysteinyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
 gi|259511827|sp|C4LH17|SYC_CORK4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|237757872|gb|ACR17122.1| Cysteinyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 473

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 146/488 (29%), Positives = 235/488 (48%), Gaps = 57/488 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I+++  R++ +F  +      +Y+CG TV    HIG+ R  + FD+L   L Y   
Sbjct: 1   MTLRIFDSASRQLRDFVPLREGRASVYLCGATVQSAPHIGHLRSGVAFDILRNWLTYMGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V ++RN+TDIDDKI+ +A +       N       +   ++F     +L    P+ +
Sbjct: 61  D--VAFIRNVTDIDDKILNKAAEH------NRPWWEWAATYEREFQWAYDQLGVTPPSLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT H+P+MI  +Q II  GH Y  +  +     S+P+YGS S +K+DE   G      
Sbjct: 113 PHATGHVPEMIEYMQRIIDAGHGYAVDGNVYLSPMSLPDYGSLSGQKLDEMDQGESA--G 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W++PWGRGRPGWH+EC+ M++ YLG  FDIH GGLDL F
Sbjct: 171 TGKRDPRDFTLWKAAKPGEPSWDTPWGRGRPGWHLECTTMATKYLGAEFDIHAGGLDLKF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+  A      A  W+HNG++ + G KMSKS GN +++  LL+  +      
Sbjct: 231 PHHENEIAQAHAAGDG--FARYWMHNGWVTMAGEKMSKSLGNVLSVPNLLQIVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------KGIIDP 349
               +R  +   HYR  ++F+   L EA     +  +   +             +  +  
Sbjct: 283 -PVELRYYLGSAHYRSMLEFSEDALREAAAGYRRLEKFVHAASSVAGKNDRTLGRSEVTD 341

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------------PIFNASAHILGI 394
           A   A+ +D+   +A+  +HK+ R S    D                     A   +LG+
Sbjct: 342 AFTDAMNDDIGVPAALAEVHKVVRSSNSRLDAARRGDSDAVESVVSAGEQVRAMLGVLGV 401

Query: 395 EVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   E   +           +   +   +  R      K +++AD +R +L + G ++ D
Sbjct: 402 DPLDEKWQEIAAESGAEHDALDTLVRAELDIRAKARAEKDWATADAVRDRLAAAGIVVTD 461

Query: 445 YKNPDNGQ 452
             +    +
Sbjct: 462 TPSGAEWE 469


>gi|260592037|ref|ZP_05857495.1| cysteine--tRNA ligase [Prevotella veroralis F0319]
 gi|260536321|gb|EEX18938.1| cysteine--tRNA ligase [Prevotella veroralis F0319]
          Length = 495

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 169/506 (33%), Positives = 239/506 (47%), Gaps = 65/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++   
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLKHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQYYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD +      +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQIMDNGYAYESNGSIYFDVAKYDKDHHYGVLSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           + +    +R       K N  DF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 LTDMINNSRELAGVGEKHNQVDFALWKRAMPEHIMRWPSPWSNGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GDHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + +    K     +++    IR  +L  HYR  +DF+ + L  AE    +          
Sbjct: 293 LEQFFTGKHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDSAR 352

Query: 347 IDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKNHD 380
           I P+                    A+ +DL T + I  L +           +      D
Sbjct: 353 IQPSDASDDNTKKFVANFRQKCYDAMNDDLMTPAVISNLFEACHLVNVLIDHKAQISADD 412

Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIR 432
           L  +  A       ILG++  +   N     A    ++ ++  R      K ++ +D IR
Sbjct: 413 LKELTEAMQLFAFDILGLKNERSANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
             L   GF ++D K+         WK
Sbjct: 473 DALADAGFQVKDTKD------GVTWK 492


>gi|311740178|ref|ZP_07714010.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311304733|gb|EFQ80804.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 462

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 156/475 (32%), Positives = 232/475 (48%), Gaps = 45/475 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IY+T  R   +F+ I P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 2   STLRIYDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  + P+ +
Sbjct: 62  D--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVIPPSVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
           PRAT  + QM+  +Q +I  G AY A+  + FD ++       +YGS S  K++E + G 
Sbjct: 114 PRATGFVTQMVDYMQRLIDAGFAYPADGSVYFDVAAWTKAEGSDYGSLSGNKVEEMEQGE 173

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+   DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIH GG
Sbjct: 174 --GEDSAKRGAQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSNFDIHCGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I  +LE  + 
Sbjct: 232 LDLQFPHHENEIAQSHAA--GDKFANYWMHNHWVTMSGEKMSKSLGNVLSIPNMLELVR- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVL 352
                    +R  +   HYR  ++++   LTEA     +             G       
Sbjct: 289 ------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFLGHFDDLELGEWTQGFA 342

Query: 353 SALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEH--- 400
            A+ +D+    A+  +H   R   K            L     A AH+LG +  +     
Sbjct: 343 DAMNDDIAVPKALAEIHTTVRAGNKALAAGDEAEARTLAGQVRAMAHVLGFDPLEWEDGA 402

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                +  +   ++  ++ R      K F++AD +R +L + G  + D  +    
Sbjct: 403 QASGADAALDALVQAELERRTQARADKDFATADAVRDRLAAAGITITDTPDGPTW 457


>gi|19553839|ref|NP_601841.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62391480|ref|YP_226882.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|24418686|sp|Q8NMD7|SYC_CORGL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21325413|dbj|BAC00035.1| Cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41326821|emb|CAF21303.1| CYSTEINE TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
          Length = 460

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 152/485 (31%), Positives = 240/485 (49%), Gaps = 52/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R + +F+ + P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 1   MTLRIFDTGTRTLRDFKPVQPGHASVYLCGATPQSSPHIGHVRSAVAFDILRRWLMAKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               S   ++F      L  L P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILTKASEN------GRPWWEWVSTYEREFTWTYNTLGVLPPSTE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGT 177
           PRAT H+ QMI  +Q +I +G AY  +  + FD ++       +YGS S  ++++ + G 
Sbjct: 113 PRATGHVTQMIKYMQRLIDNGFAYAVDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQGE 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P+ + K+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG+ FDIH GG
Sbjct: 173 --PDNFGKRGPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATYYLGEQFDIHCGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQ+  A   +K AN W+HN ++ + G KMSKS GN + + E+L     
Sbjct: 231 LDLQFPHHENEIAQAHAA--GDKFANYWMHNHWVTMAGEKMSKSLGNVLAVPEML----- 283

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVL 352
             +      +R  +   HYR  ++++   L+EA +   +        G ++     P   
Sbjct: 284 --KQVRPVELRYYLGSAHYRSVLEYSESALSEAAVGYRRIESFLERVGDVEVGEWTPGFE 341

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKE---- 399
            A+  D+    A+  +H   RE     D         L     A   +LG +  +     
Sbjct: 342 VAMDEDIAVPKALAEIHNAVREGNAALDKGDREAAEKLASSVRAMTGVLGFDPVEWGSDA 401

Query: 400 ----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                 +K + + I   ++ R      K ++ AD +R +L   G  + D  +        
Sbjct: 402 GADGKADKALDVLISSELERRATARAEKNWAVADEVRDRLADAGIEVVDTAD------GA 455

Query: 456 RWKQK 460
            WK +
Sbjct: 456 TWKLQ 460


>gi|271962520|ref|YP_003336716.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270505695|gb|ACZ83973.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 465

 Score =  498 bits (1284), Expect = e-139,   Method: Composition-based stats.
 Identities = 167/485 (34%), Positives = 241/485 (49%), Gaps = 52/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R + EF  ++P    +Y+CG TV    HIG+ R  + FDVL R +     
Sbjct: 1   MSLHLYDTSVRTVREFVPVEPGRASIYLCGATVQAPPHIGHIRSGVNFDVLRRWMVRSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+ RN+TDIDDKII  A  E     +      I  +N + F      L CL PT +
Sbjct: 61  E--VTFCRNVTDIDDKIIRVAADEGVPWFV------IAERNQRAFTWAYEVLGCLPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
           PRAT H+P+MI L++ +I  GHAY ++ ++ FD  S  + YGS S ++++  +       
Sbjct: 113 PRATGHVPEMIELMERLIAAGHAYASSGDVYFDVMSYADRYGSLSNQRLENMRAAGDTDT 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK   P EP W +PWGRGRPGWH+ECSAM++ YLG  FDIHGGG+DLI
Sbjct: 173 DSCKRDPRDFALWKGEKPGEPTWPTPWGRGRPGWHLECSAMATKYLGPTFDIHGGGVDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+ QS  A      A  W+HNG L +   KMSKS GN + I E+        + 
Sbjct: 233 FPHHENELTQSQAAGDG--FARYWMHNGMLKIGAEKMSKSLGNSLLIPEV-------TKK 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTV----------QRLTEAEILLSKWPQTSTSKGIIDPAV 351
                +R  +   HYR  ID++           QR+       ++      +   +  A 
Sbjct: 284 VRPVELRYYLAAPHYRSSIDYSEEALAEAASAYQRIEGFVTRAAEVIHDVDAHAPLPQAF 343

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL- 401
             AL +DL T  A+  +H++ RE               LL        +LG++   E   
Sbjct: 344 ADALDDDLGTPQALAVVHEVVREGNVALAQGNKEQVARLLAETQNMLDVLGLDPRSEQWR 403

Query: 402 ----NKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
               +  +   ++ LV    ++R      K F++AD IR QL   G ++ED        +
Sbjct: 404 SSGGDTGLRSTVDALVSVALEQRQAARGRKDFAAADGIRDQLAGAGILVEDT------PQ 457

Query: 454 MTRWK 458
             RW+
Sbjct: 458 GPRWE 462


>gi|55980862|ref|YP_144159.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|61216139|sp|Q5SJV9|SYC_THET8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55772275|dbj|BAD70716.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 480

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 160/494 (32%), Positives = 242/494 (48%), Gaps = 55/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IY+TL R+   F+   P ++ +YVCGPTVY   H+G+AR  +V+DVL R L +   
Sbjct: 1   MGLVIYDTLARRKVPFEPAVPGHVGIYVCGPTVYADPHLGHARGPVVYDVLRRYLLHKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V +V NITD+     +    E   +            +  K T  +      L  L 
Sbjct: 61  K--VRFVSNITDVGHLTDDADEGEDKIVRRAKLERLEPMEVAEKYTWSYFDAMQALNVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P+  PRA+ HIP+M+ L + ++  G AYE    + F   S P YG  S ++++E + G R
Sbjct: 119 PSIAPRASGHIPEMLELTERLLARGVAYERKGSVYFRVRSFPEYGKLSGKRLEELRAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           V  +  K++P DF LWK + P     W+SPWG G PGWHIEC+AMS  YLG+ FD+H GG
Sbjct: 179 VEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGFDLHAGG 238

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++LLE  + 
Sbjct: 239 IDLQFPHHECEIAQAEAA--GFRFARHWMHHNHVLLEGEKMAKSTGNLVLLHDLLEAHE- 295

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------P 338
                    +R  +L THYR P+DFT + L  A+    +                    P
Sbjct: 296 ------PMALRFYLLQTHYRSPMDFTWEGLESAKRGYGRLLHAYREVRGRKKTAPPGTTP 349

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILG 393
           +   +   ++ A + A+ +DL+T  A+ AL     E  K       + L    A  H LG
Sbjct: 350 ELERALDALEKAFMEAIEDDLSTPEALAALFAFLPELHKLLPEAKAESLARAEAVFHTLG 409

Query: 394 IEVCKEHLNKNISIAI---------EKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +      + +   +           L++ R    + K +  +D IR++L + G I+ED
Sbjct: 410 EGILGLFPERVLEERVSGPLLEGLIALLLELREEARRAKDYEKSDLIRERLRALGVIVED 469

Query: 445 YKNPDNGQRMTRWK 458
            K         RW+
Sbjct: 470 TKEGP------RWR 477


>gi|119386770|ref|YP_917825.1| cysteinyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|187629836|sp|A1B9D5|SYC_PARDP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119377365|gb|ABL72129.1| cysteinyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 462

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 194/457 (42%), Positives = 265/457 (57%), Gaps = 21/457 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R+   F+ IDP N+R+Y+CGPTVYD AH+GNARP++V DVL RLLR+  G 
Sbjct: 3   EIRLTNTRTRRKEVFRPIDPQNVRLYLCGPTVYDRAHLGNARPVVVIDVLVRLLRHLLGA 62

Query: 64  KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             VTYVRN TD+DDKI   A   ++      + + I   T +    +  D   L    P 
Sbjct: 63  DHVTYVRNFTDVDDKINATALARKEAGTPGTLEELIRERTHETIGWYHADMDALGAERPD 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H+PRAT++I +MI +I+ +I  GHAY  +  ++F   S  +YG  S R +D+   G RV 
Sbjct: 123 HEPRATDYIGEMIAMIETLIAGGHAYARDGHVLFRVRSYADYGKLSGRSVDDMIAGARVE 182

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG+ FDIH GG+DL
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGESFDIHAGGIDL 242

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQSCCA      A +W+HN  L +EGRKMSKS GNF T+ +LL+      +
Sbjct: 243 QFPHHENEIAQSCCAHPHGDFARVWLHNEMLQVEGRKMSKSLGNFFTVRDLLD------Q 296

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---PAVLSALYN 357
             P  VIR  +L THYR+P+D+T ++  EAE +L +W              PAV++AL +
Sbjct: 297 GIPGEVIRFVLLSTHYRKPMDWTAEKAREAEAVLRRWRGLVAGVEPAPGPAPAVVAALAD 356

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE----HLNKNISIAIEKLV 413
           DLNT  AI ALH++A +        P   A A +LG+             ++S   E++ 
Sbjct: 357 DLNTAGAIAALHEMAGQGDG-----PGLLAGARMLGLLTEDLGGWIAEGPDLSALTERMA 411

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             R      K FS+ D ++++L   G  +        
Sbjct: 412 ALRADAKASKDFSAVDALKQRLLDAGVEVRMSAAGVE 448


>gi|116073130|ref|ZP_01470392.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068435|gb|EAU74187.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 496

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 169/515 (32%), Positives = 242/515 (46%), Gaps = 78/515 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++  N+L  +   F+ ++     +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MPLRFTNSLTSRTEAFEPLEAGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N TDIDDKI+ RA +E        ++  ++ +N + F  D  RL  L     
Sbjct: 61  D--VTYVQNYTDIDDKILNRANEE------GSSMEAVSERNIEAFEIDMGRLNILPADRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  I  +  LI  +   G AY ++ ++ FD S   +YG  S R  +EQ+ G      
Sbjct: 113 PRATGCIDGIQKLISELEAKGAAYSSDGDVYFDISKAKDYGKLSGRDPNEQQQGASGRTA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK     EP W+SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DGEESRKRHPFDFALWKGVKEGEPSWDSPWGPGRPGWHIECSAMVRQELGTTIDIHLGGG 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A+     AN+W+HNG +N+ G KMSKS GNF TI  LL++    
Sbjct: 233 DLTFPHHENEIAQSETANGT-TLANLWMHNGMVNVGGTKMSKSLGNFTTIRALLDS---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
                   +RL +L  HYR+P+DFT + L  A                            
Sbjct: 288 --GVSPMTMRLFVLQAHYRKPLDFTAEALEAATTGWKGLNAALGLGRVHAQSLGWPVAAV 345

Query: 341 ------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------------- 373
                            ++    ++A+ +DLN+  A+  L  LAR               
Sbjct: 346 QDQGAQLAGDAVDGDLAVMKERFVAAMDDDLNSSGALAVLFDLARPLRGLANRLVRGDQP 405

Query: 374 -ESTKNHDLL----PIFNASAHILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKK 424
            ++  + +LL     +    A ++G+   ++            AI+  +  R      K 
Sbjct: 406 EQAPADLELLQKRWQLLRELAAVVGLREEQQQTEAAGDGADDAAIDAAIAARKAAKAAKN 465

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           F+ AD IR  L ++G  L D         +T W++
Sbjct: 466 FAEADRIRDALTAQGIELIDKPGG-----ITEWRR 495


>gi|15617084|ref|NP_240297.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219682391|ref|YP_002468775.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|11134971|sp|P57558|SYC_BUCAI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254765184|sp|B8D815|SYC_BUCAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|25293242|pir||G84986 cysteine-tRNA ligase (EC 6.1.1.16) [imported] - Buchnera sp.
           (strain APS)
 gi|10039149|dbj|BAB13183.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|219622124|gb|ACL30280.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|311086211|gb|ADP66293.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. LL01
           (Acyrthosiphon pisum)]
 gi|311086789|gb|ADP66870.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087376|gb|ADP67456.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
 gi|311087872|gb|ADP67951.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. JF98
           (Acyrthosiphon pisum)]
          Length = 464

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 178/481 (37%), Positives = 249/481 (51%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL      F  I  + + +YVCG TVYDF HIG+ R  +VFD++ R LR+   + 
Sbjct: 2   LKIFNTLTSTKEIFTPIKKNRVNLYVCGVTVYDFCHIGHGRTFVVFDMIVRYLRFSGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII ++ +E   I         T+   ++  KD   L    P  +PR
Sbjct: 61  -VKYVRNITDIDDKIISKSTKEKKKIN------TFTASMIKEMHKDFDLLGISVPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T++I  +I +I  +I   HAY   N ++IF   S PNYG+ SR+ +   + G+R+P   
Sbjct: 114 VTDYIDNIIRIITTLIKKKHAYIHKNGDVIFSIDSDPNYGTLSRQSLTSLESGSRIPLNN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DFILWK S   E  W+SPWG+GRPGWHIECSA+++ +     DIHGGG DL+FP
Sbjct: 174 MKKNPLDFILWKSSNKEEYSWDSPWGKGRPGWHIECSAITNVFFNNSIDIHGGGSDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE +QS C +  +   N W+H G + L  +KMSKS GN   +  +L       +   
Sbjct: 234 HHENERSQSICFNN-KSMINFWMHTGMVILNNKKMSKSLGNVYFLRNIL-------KDCD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A V+R   L THYR PI +  + L +A   L                      +    +A
Sbjct: 286 AEVLRYFFLSTHYRHPIYYCEKNLDQAYTSLKYLYTALYDTNPFFNNEEGLNFELEFYNA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVC--KEHLNKN 404
           + +D NT +      K+AR+    KN D+L            A+ LG      KE L K 
Sbjct: 346 MNDDFNTPAVFSIFFKIARKINFLKNKDILKTNKFAFRLKYLANNLGFLFQDPKEFLQKK 405

Query: 405 IS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +        I+ L+++R I  + K +  AD IRK+L S   ILED  +       T W+
Sbjct: 406 TTLNLLTLKEIQLLIEKRNIARQSKLWQEADNIRKKLMSLDIILEDLPDK------TIWR 459

Query: 459 Q 459
           +
Sbjct: 460 K 460


>gi|226363790|ref|YP_002781572.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|254781690|sp|C1BAC4|SYC_RHOOB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226242279|dbj|BAH52627.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 464

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 157/477 (32%), Positives = 234/477 (49%), Gaps = 47/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T  R + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L     
Sbjct: 1   MTLRLFDTETRALRDFAPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWL--LAH 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDI+DKI+ +A +               +   + F     +L  L P+ +
Sbjct: 59  DYDVAFVRNVTDIEDKILNKAAE------AGRPWWEWAATFERSFTWAYQQLGVLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QM+ ++Q +I +GHAY A  ++ FD  S P YGS S  K+D+   G    E 
Sbjct: 113 PRATGHITQMVEMMQRLIDNGHAYAAGGDVYFDVRSYPRYGSLSGHKLDDVHQGESAGEC 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GGLDL+F
Sbjct: 173 --KRDPRDFTLWKAEKPGEPSWPTPWGRGRPGWHLECSAMAEFYLGAAFDIHCGGLDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+ CA   +  A  W+HNG++ + G KMSKS GN +++  +L       +  
Sbjct: 231 PHHENEIAQAKCA--GDDFAQYWLHNGWVTMGGEKMSKSLGNVLSVPNVL-------KKV 281

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLS 353
               +R  +   HYR  ++++   L E      +               + G    A   
Sbjct: 282 RPQELRYYLGSAHYRSMLEYSDTALDEGAAAYRRIESFVMRTQERAGEVTIGRWTDAFAR 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN 404
           AL +DL   +A+  +H   RE     D         +     A   ILG++   EH  + 
Sbjct: 342 ALDDDLAVPAALAEVHGKVREGNIALDGGDLEGARAIASQVRAMLGILGVDPLDEHWTQE 401

Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + +   ++ R      K ++ AD +R +L   G  + D  N    
Sbjct: 402 TADASAATDALDVLVRAELERRQTARAEKNWAVADEVRDRLIRAGIEVTDTPNGPEW 458


>gi|50841867|ref|YP_055094.1| cysteinyl-tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|61216186|sp|Q6AAT0|SYC_PROAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50839469|gb|AAT82136.1| tRNA synthetase [Propionibacterium acnes KPA171202]
 gi|315106472|gb|EFT78448.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
          Length = 490

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 160/488 (32%), Positives = 233/488 (47%), Gaps = 60/488 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L        
Sbjct: 18  KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CSGYR 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT V N+TDIDDKI+ ++                      +       L C  PT++PRA
Sbjct: 76  VTVVANVTDIDDKILAKSAAAGTPWW------AHAYHYENELHAAYKALGCRPPTYEPRA 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE         +
Sbjct: 130 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGIRVDEMSPAEDSDPR 189

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 190 -GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 248

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS  A      A+ W+HN ++ + G KMSKS GN   ++E+ +T     
Sbjct: 249 LRFPHHENELAQSAAA--GRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTKT----- 301

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------QTST 342
             +    +R  +L  HYR  I+F+         L EA   + +             +  T
Sbjct: 302 --YSPRAVRYFLLAPHYRSMIEFSPSDEGTMGSLDEATKAIERIDSFLDRASNLVGEQVT 359

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
           +   +  A ++A+ +DL T  A+ AL     E  K+  +         L    A   + G
Sbjct: 360 ASHELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 419

Query: 394 IEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++             + L   +   +  ++++R      K +++AD IR  L + G  +E
Sbjct: 420 LDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGLTIE 479

Query: 444 DYKNPDNG 451
           D     + 
Sbjct: 480 DTPAGAHW 487


>gi|213963733|ref|ZP_03391983.1| cysteinyl-tRNA synthetase [Capnocytophaga sputigena Capno]
 gi|213953613|gb|EEB64945.1| cysteinyl-tRNA synthetase [Capnocytophaga sputigena Capno]
          Length = 490

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 160/489 (32%), Positives = 234/489 (47%), Gaps = 42/489 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MNHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRTLKFL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD     DD  +   R    S         I  K T  F K       
Sbjct: 61  GYK--VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDE 172
           L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 178

Query: 173 QKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
               TR    +  K NP DF LWK+++P     W SPWG G PGWH+EC+ MS+ YLG  
Sbjct: 179 LFANTRDLDGQGEKHNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL FPHHE EIAQ             W+H   L + G++MSKS GN+I   +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHGESP-VRYWMHANMLTMNGQRMSKSTGNYILPMQ 297

Query: 291 LL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--- 346
           L+     F  + +   VIR   +  HYR  +D + + +  AE   S+  +   +      
Sbjct: 298 LISGENSFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFSRLMEAVKTLNEMST 357

Query: 347 --------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNH--------DLLPI 384
                                AL +D N+   I  L ++ +    +         +L  +
Sbjct: 358 DLEHPGPLSYEIDQWKQKCYDALLDDFNSPILIAHLFEMVKWINSDEKISVDELNELKTL 417

Query: 385 FNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            NA    +LG++  ++ +N N  +   ++ L+  R+     K ++ +D IR +L + G  
Sbjct: 418 MNAFVFDVLGLQSEQQTVNNNDKLDGVLQLLINMRMEARANKDWALSDKIRDELLAMGIQ 477

Query: 442 LEDYKNPDN 450
           L+D K   +
Sbjct: 478 LKDGKEGTS 486


>gi|288801920|ref|ZP_06407362.1| cysteine--tRNA ligase [Prevotella melaninogenica D18]
 gi|288335962|gb|EFC74395.1| cysteine--tRNA ligase [Prevotella melaninogenica D18]
          Length = 495

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 170/506 (33%), Positives = 238/506 (47%), Gaps = 65/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++   
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 SLNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGVLSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           I +    +R       K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 ITDMINNSRELAGVGEKRNQIDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GDHFDIHGGGMDLIFPHHECEIAQA-VASQGDEMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + +          +++    IR  +L  HYR  +DF+ + L  AE    +          
Sbjct: 293 LEQFFTGEHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLAR 352

Query: 347 IDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKNHD 380
           I PA                    A+ +DL T + I  L +           +      D
Sbjct: 353 IQPAAASDENTKKFVAGFRQKCYDAMNDDLMTPAVISTLFEACHLVNILIDHKAQISVDD 412

Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIR 432
           L  +  A       ILG++  +   N     A    ++ ++  R      K ++ +D IR
Sbjct: 413 LKELTEAMQLFAFDILGLQNERGANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
             L   GF ++D K+         WK
Sbjct: 473 DALAEAGFQVKDTKD------GVTWK 492


>gi|91216061|ref|ZP_01253030.1| cysteinyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
 gi|91186038|gb|EAS72412.1| cysteinyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
          Length = 497

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 161/489 (32%), Positives = 239/489 (48%), Gaps = 44/489 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KIYN++  +  +FQ I    + MYVCGPTVY   H+GN R  I FD+++R L++   
Sbjct: 7   QSLKIYNSITGEKEDFQPITKGYVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHLGY 66

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  + YVRNITD     +D      R    +  +      +  K +  F +   +   L 
Sbjct: 67  K--IRYVRNITDAGHLENDGEEGEDRIAKKAKVMELEPMEVVQKYSIDFHQILEKFNNLP 124

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKM 175
           P+ +P AT HI + I  I+ II  G AY+ N  + FD        +YG  S RKI++   
Sbjct: 125 PSIEPTATGHIIEQIETIKTIIDKGLAYQVNGNVYFDVLKYNEKHHYGKLSGRKIEDLIS 184

Query: 176 GTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            TR    +  KKNP DF LWK++ P     W SPWG G PGWH+EC+ MSS YLG  FDI
Sbjct: 185 NTRELAGQSDKKNPQDFALWKKAEPQHIMRWPSPWGIGFPGWHLECTVMSSKYLGDEFDI 244

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL- 292
           HGGG+DL FPHHE EIAQ   A   +   N W+H   L L G+KMSKS GN I   EL  
Sbjct: 245 HGGGMDLKFPHHECEIAQGQAATGKDP-VNYWMHANMLTLNGKKMSKSTGNNILPRELFT 303

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-- 350
              +   +S+ APVIR  ML  +YR  +DF+ + L+ +E    K  ++ ++  ++  +  
Sbjct: 304 GDNETLSKSYTAPVIRFFMLQANYRSILDFSDEALSASEKGFQKLMESLSTLKVLKASKT 363

Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKN--------HDLLPIFNASA-- 389
                         A+ +D N+   I  L +  ++             + L + + +   
Sbjct: 364 SDFNVNTWKDKCYEAMNDDFNSPILIAHLFEAVKQINLAKSGDKRLSRESLDLLSKTMND 423

Query: 390 ---HILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
               ++G+E  +     E    +    IE ++Q R      K F ++D IR +L      
Sbjct: 424 FIFEVMGLEDLEDTSKSEANTDDFKELIEFMIQMRNHARLNKDFETSDKIRDKLLKMDVE 483

Query: 442 LEDYKNPDN 450
           L+D K   +
Sbjct: 484 LKDQKEGTS 492


>gi|88803012|ref|ZP_01118539.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
 gi|88781870|gb|EAR13048.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
          Length = 492

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 162/487 (33%), Positives = 239/487 (49%), Gaps = 42/487 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++K+YN+L +K  +F+ I    + MYVCGPTVY  AH+GN R  + FD+++R L +  
Sbjct: 6   ENQLKVYNSLSKKKEDFKPITAGYVGMYVCGPTVYSNAHLGNVRTFMFFDIVFRYLLHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D      R    +         +  + T  F         L
Sbjct: 66  YK--VRYVRNITDAGHLENDADEGEDRIAKKARIEKIEPMEVVQRYTVDFHNVLKNYNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I++I+  G AYE N  + FD    +   +YG  S RK+++  
Sbjct: 124 PPSIEPTATGHIVEQIEMIKDIVNKGFAYEVNGSVYFDVLAYNKKEHYGILSGRKVEDLV 183

Query: 175 MGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR +  +  KKNP DF LWK++       W SPW  G PGWH+ECS MS+ YLG+ FD
Sbjct: 184 HNTRSLDGQSDKKNPQDFALWKKAEEKHIMRWPSPWSEGFPGWHLECSVMSTKYLGEQFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQS          N W+H   L L G+KM+KS GNFI  NE+L
Sbjct: 244 IHGGGMDLKFPHHECEIAQSKTCSGKTP-VNYWMHTNMLLLNGQKMAKSTGNFILPNEIL 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----------EAEILLSKWPQTS 341
                   +++ A V+R   L  +YR  +DF+   L           EA  +L     +S
Sbjct: 303 TGENDILPKAFSASVVRFFNLQANYRSILDFSGAALEASEKGHSKLMEAVNVLENLATSS 362

Query: 342 TSKGIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------- 387
            S   ++       +A+ +D NT   I  L +  +   +  +      A           
Sbjct: 363 VSSFDVEKWKKSCYAAMNDDFNTPVLISYLFEAVKIINQIKEQKESITATDLGVLQETLN 422

Query: 388 --SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                +LG+  EV   H  K   + +E L++ R    + K+++ +D IR +L   G  L+
Sbjct: 423 TFVFDVLGLTNEVLSHHSEKTNGV-VELLIKLRKEARENKEWALSDQIRDELIELGIQLK 481

Query: 444 DYKNPDN 450
           D K+   
Sbjct: 482 DGKDGTT 488


>gi|332558152|ref|ZP_08412474.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332275864|gb|EGJ21179.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 484

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 198/481 (41%), Positives = 271/481 (56%), Gaps = 43/481 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I++ NT  R+   F+ IDP N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YG
Sbjct: 2   TEIRLTNTKSRRKEAFEPIDPGNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           E+ VTYVRN TD+DDKI   A   +       +   I   T +  + + +D   L  L P
Sbjct: 62  ERHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           TH+PRAT  I  MI +I++++  GHAYE    ++F   S  +YG+ S R +D+   G RV
Sbjct: 122 THEPRATEWIGAMIAMIEDLMAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-------VFD 232
                K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K        FD
Sbjct: 182 EVAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMADGLLMKDLPENKRSFD 241

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHHENEIAQS CA      A +W+HN  L ++GRKMSKS GNF T+ +LL
Sbjct: 242 IHAGGIDLQFPHHENEIAQSRCAHPEGGFAKVWMHNEMLLVDGRKMSKSLGNFFTVRDLL 301

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---P 349
           +      + WP  VIR+  L THY +P+D+T ++  +A+  L  W   +      +    
Sbjct: 302 D------QGWPGEVIRMVYLGTHYGKPMDWTAEKAEQAKATLEGWFNLTDGLEAEEISGE 355

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN------- 402
             L  L +DLNT  AI ALH+LA EST          A   +LG+    EH+N       
Sbjct: 356 RYLDELCDDLNTAGAIAALHRLASESTAGR-----LKAGMRLLGL-PDAEHVNWWRREIV 409

Query: 403 -----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                         ++ I  L+Q    L   K++  AD +++ LE+ G  + + K     
Sbjct: 410 TLFGTASSGSTPLYTVEIVPLLQRWQDLRLAKRYGEADALKRALENVGLRVTNGKRGPTA 469

Query: 452 Q 452
           +
Sbjct: 470 E 470


>gi|225620434|ref|YP_002721691.1| cysteinyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254765180|sp|C0R1J9|SYC_BRAHW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|225215253|gb|ACN83987.1| cysteinyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 474

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 166/494 (33%), Positives = 254/494 (51%), Gaps = 57/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K I  YN+L R+   F+ I+ + + MY CGPTVY++AHIGN R  I  D+L R+L  Y  
Sbjct: 2   KDIVFYNSLTREKEVFKPINANEVGMYSCGPTVYNYAHIGNFRAYIFSDLLRRVLEDYGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N+TD+DDK I+ +++ H       +++  T K  + F +D   L     T  
Sbjct: 62  N--VKLVMNLTDVDDKTIKNSKENH------ISLNDYTKKYKEAFFEDIKTLGIKKATVN 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR---RKIDEQKMGTRV 179
           P AT+HI +MI +I+ +  +GH YE++  + F  S+ P YG  +    +++ +   G  +
Sbjct: 114 PAATDHIKEMINIIELLKKNGHTYESDGSVYFKISTFPQYGELANLDKQELLDGASGRVL 173

Query: 180 PEKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            ++Y K+N +DF+LWK  T    +  W+SP+G+GRPGWHIECSAMS  YLGK FDIH GG
Sbjct: 174 NDEYDKENASDFVLWKAYTEDDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTGG 233

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D  FPHHENEIAQ+  A   EK  N W+H   L ++G KMSKS GNF T+ +LL+    
Sbjct: 234 VDNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLD---- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------P 338
             +      IR +++ +HYR+ ++FT++ + +++  + +                     
Sbjct: 289 --KGLSPEAIRYSLINSHYRKQLNFTIEGIKQSQSAIDRVNDLIFRLKDINNTESNEINE 346

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------PIFNASAHI- 391
                  + +     ++YNDLN   A+  L  L +    + D +       I      + 
Sbjct: 347 NLLKELEVSNEKFSDSIYNDLNISEALGILFTLVKTVNTSFDSINVNTRDAILKFIERVN 406

Query: 392 -----LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                  +    +  N      I KL++ER I  K K +  AD IR QL S G  + D  
Sbjct: 407 NIINCFNMGDTDKKSNNEDEDKINKLIEERTIAKKEKNYQKADEIRNQLLSMGIEIMDT- 465

Query: 447 NPDNGQRMTRWKQK 460
                 +  +WK+K
Sbjct: 466 -----PQGVKWKRK 474


>gi|311741770|ref|ZP_07715581.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314776|gb|EFQ84682.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 468

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 166/490 (33%), Positives = 246/490 (50%), Gaps = 56/490 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R+   F  + P  + +Y CG TV    HIG+ R  +VFDVL R L     
Sbjct: 1   MSLHLYDTATRRTAAFVPVTPGQVSIYHCGLTVQGPPHIGHIRKEVVFDVLRRWLERSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT V N+TDIDDKII + R++            +   N +        L C  PT++
Sbjct: 61  E--VTIVANVTDIDDKIIAKGREQGRPWF------AVAYANERALHAAYEVLGCQPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT H+P+M+ +I  +I  GHAY A   + ++ FD  S P YG+ SR+ +D+ +     
Sbjct: 113 PRATGHVPEMVEMIATLIERGHAYPATDDSGDVYFDVRSWPEYGALSRQSVDDMQPAEDA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           P    K++  DF LWK     +P    W +PWGRGRPGWH+ECSAM+  YLG  FDIHGG
Sbjct: 173 PP-AGKRDARDFALWKGHKAGDPDSASWTTPWGRGRPGWHLECSAMAGKYLGHEFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A   ++ A IW+HN  LNL G KM+KS GN + ++E++    
Sbjct: 232 GLDLRFPHHENELAQSRAA--GQRFARIWMHNAMLNLGGSKMAKSVGNTLMVSEVV---- 285

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGII 347
              R  P   +R  +L  HYR  I+F+ + L EA     +     T           G  
Sbjct: 286 ---RRVPPIALRYYLLAAHYRSVIEFSEESLAEAATAFERIAGFVTRAAELVGPGEPGDP 342

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVC- 397
               ++A+ +DL+  +A+ ALH    +  +           ++L    A   +LG++   
Sbjct: 343 TAEFVAAMDDDLSVPAALAALHATIGDGQRLLAAGSSPELREVLASVRAMLDVLGVDPLS 402

Query: 398 -------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                   +  ++ +   +  L+++R      + F +AD +R QL + G  +ED  +   
Sbjct: 403 PVWSGATDDSTDQALDTLVGALLEQRTEARAAQDFQTADRVRDQLTAAGVEIEDTPHGP- 461

Query: 451 GQRMTRWKQK 460
                RW  K
Sbjct: 462 -----RWSVK 466


>gi|314965270|gb|EFT09369.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
          Length = 476

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 158/491 (32%), Positives = 230/491 (46%), Gaps = 60/491 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L     
Sbjct: 1   MTLKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CS 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT V N+TDIDDKI+ ++                      +       L C  PT++
Sbjct: 59  GYQVTVVANVTDIDDKILAKSAATGTPWW------AHAYHYENELHAAYKALGCRPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE       
Sbjct: 113 PRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDS 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGG
Sbjct: 173 DPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHHENE+AQS  A      A  W+HN ++ + G KMSKS GN   + E+     
Sbjct: 232 GIDLRFPHHENELAQSAAA--GRPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV----- 284

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------Q 339
              +++    +R  +L  HYR  I+F+         L EA   + +             +
Sbjct: 285 --TKAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGE 342

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
             T+   +  A ++A+ +DL T  A+ AL     E  K+            L    A   
Sbjct: 343 QVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLA 402

Query: 391 ILGIEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           + G++             + L   +   +  ++++R      K +++AD IR  L + G 
Sbjct: 403 VFGLDPQAPEWADVTGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGL 462

Query: 441 ILEDYKNPDNG 451
            +ED     + 
Sbjct: 463 TIEDTPAGAHW 473


>gi|319948867|ref|ZP_08022980.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437469|gb|EFV92476.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 478

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 147/489 (30%), Positives = 227/489 (46%), Gaps = 58/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R + EF  +   +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 1   MTLHLYDTATRSLREFTPVREGHASVYLCGATPQAVPHIGHVRSGVAFDILRRWLLSTGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               + + ++F +    L  L P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILTKAAEN------GRPWWEWAATHEREFTRAYDALGVLPPSTE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGT 177
           PRAT H+ QMI  ++ +I  G+AY A   + FD ++       +YG  S  ++DE   G 
Sbjct: 113 PRATGHMTQMIEYMERLIERGYAYPAEGSVYFDVAAWSAAPEGDYGHLSGHRLDEVDQGE 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIHGGG
Sbjct: 173 -AADLRGKRDPRDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATWYLGGTFDIHGGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENE AQS  A      A  W+HNG++ + G KMSKS GN +++  +L   + 
Sbjct: 232 LDLQFPHHENEAAQSHAAGDG--FARYWLHNGWVTMAGEKMSKSLGNVLSVPNILTAVR- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTS 341
                    +R  +   HYR  ++++ + L EA     +                 P   
Sbjct: 289 ------PVELRYYLGSAHYRSMLEYSPEALQEAAAAYRRIEAFVQRVDEAVRSGATPDAE 342

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHIL 392
              G    A  +A+ +DL   +A+  +H   R                      A   +L
Sbjct: 343 VPVGEWTEAFAAAMDDDLGVPAALAEIHGRVRAGNTALSAGDTEAALTAASSVRAMTAVL 402

Query: 393 GIEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           G++                   + + +   ++ R      K F++AD IR +L + G  +
Sbjct: 403 GVDPLDPQWASAAGGDDAALTALDLLVRAELEARAQARADKDFATADAIRDRLVAAGIEV 462

Query: 443 EDYKNPDNG 451
            D  +    
Sbjct: 463 ADTADGQKW 471


>gi|262183479|ref|ZP_06042900.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
          Length = 470

 Score =  498 bits (1282), Expect = e-138,   Method: Composition-based stats.
 Identities = 157/485 (32%), Positives = 237/485 (48%), Gaps = 57/485 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T  R   EF+ + P +  +Y+CG T     HIG+ R  + FD+L R L     + 
Sbjct: 1   MRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  L P+ +PR
Sbjct: 60  -VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVLPPSVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY----------EANNEIIFDTSSIP-----NYGSFSRRK 169
           AT  + QM+  +Q +I  G AY          + +  + FD ++       +YGS S  +
Sbjct: 113 ATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSVYFDVAAWNATEGSDYGSLSGNR 172

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           ++E + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG 
Sbjct: 173 VEEMEQGET--DNAGKRSPQDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGG 230

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I 
Sbjct: 231 EFDIHCGGLDLQFPHHENEIAQSHAA--GDKFANYWMHNHWVTMAGEKMSKSLGNVLSIA 288

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSK 344
            +LE  +          +R  +   HYR  ++++   LTEA     +         +  K
Sbjct: 289 NMLEIVR-------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVGKFENVEK 341

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE 395
           G   PA   A+ +D+    A+  +H   R   K            L     A A +LG +
Sbjct: 342 GEWTPAFEEAMNDDIAVPKALAEIHTTVRAGNKALSEGNREEAKRLAGAVRAMAAVLGFD 401

Query: 396 VCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              E              + + +   ++ R      K +++AD +R +L + G  + D  
Sbjct: 402 PLDEQWKDSGEESGAEAALDVLVRAELERRTTARAEKDWATADAVRDRLAAAGITITDTA 461

Query: 447 NPDNG 451
           +    
Sbjct: 462 DGPTW 466


>gi|282853446|ref|ZP_06262783.1| cysteine--tRNA ligase [Propionibacterium acnes J139]
 gi|282582899|gb|EFB88279.1| cysteine--tRNA ligase [Propionibacterium acnes J139]
 gi|314922189|gb|EFS86020.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
 gi|314928560|gb|EFS92391.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970346|gb|EFT14444.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
 gi|314982476|gb|EFT26569.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
 gi|315092230|gb|EFT64206.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
 gi|315094030|gb|EFT66006.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
 gi|328908175|gb|EGG27934.1| cysteine--tRNA ligase [Propionibacterium sp. P08]
          Length = 476

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 158/491 (32%), Positives = 230/491 (46%), Gaps = 60/491 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L     
Sbjct: 1   MTLKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CS 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT V N+TDIDDKI+ ++                      +       L C  PT++
Sbjct: 59  GYQVTVVANVTDIDDKILAKSAATGTPWW------AHAYHYENELHAAYKALGCRPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE       
Sbjct: 113 PRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDS 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGG
Sbjct: 173 DPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHHENE+AQS  A      A  W+HN ++ + G KMSKS GN   + E+     
Sbjct: 232 GIDLRFPHHENELAQSAAA--GRPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV----- 284

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------Q 339
              +++    +R  +L  HYR  I+F+         L EA   + +             +
Sbjct: 285 --TKAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGE 342

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
             T+   +  A ++A+ +DL T  A+ AL     E  K+            L    A   
Sbjct: 343 QVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLA 402

Query: 391 ILGIEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           + G++             + L   +   +  ++++R      K +++AD IR  L + G 
Sbjct: 403 VFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGL 462

Query: 441 ILEDYKNPDNG 451
            +ED     + 
Sbjct: 463 TIEDTPAGAHW 473


>gi|288925853|ref|ZP_06419783.1| cysteine--tRNA ligase [Prevotella buccae D17]
 gi|288337277|gb|EFC75633.1| cysteine--tRNA ligase [Prevotella buccae D17]
          Length = 496

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 159/508 (31%), Positives = 238/508 (46%), Gaps = 65/508 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQTLLIYNTLSRSKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
             +  V YVRNITD+          DDKI ++AR E            +    T ++   
Sbjct: 61  GYK--VRYVRNITDVGHMEHDADDGDDKIEKKARLEQLEPM------EVAQYYTNRYHTA 112

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
              L  L P+ +P+AT HI +   L++ I+ +G+AYE+N  I FD         YG  S 
Sbjct: 113 MNALNVLPPSIEPQATGHIIEQEELVKQILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
           R ++     +R +     K++ ADF LWKR+ P     W SPW  G PGWH EC+AM   
Sbjct: 173 RSLENIVNESRSLTGVGEKRHQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVRYWMHNNMITINGQKMGKSLGNF 291

Query: 286 ITINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           IT+ +    +     +++    IR  +L  HYR  +DF+   L  +E  L +     +  
Sbjct: 292 ITLEQFFTGSHDSLEQAYSPMTIRFFILSAHYRSTVDFSNDALKASEKGLERLMNGLSDL 351

Query: 345 G-----------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------- 380
                              +      A+ +D  T   I  L +         D       
Sbjct: 352 DRVPVSDTCDEATDQFVKQLRQRCYDAMNDDFQTQLVISYLFEACHVVNTLLDHKAHICT 411

Query: 381 -----LLPIFNASA-HILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
                L       A  +LG++      N+    A    ++ ++  R      K ++++D 
Sbjct: 412 DCLKELSETMRLFAFDLLGLKPENGDNNEAREEAYGKVVDMVLSLRSKAKADKDWTTSDK 471

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR  L   GF ++D K+         W+
Sbjct: 472 IRDALADAGFEVKDTKD------GVTWR 493


>gi|282858921|ref|ZP_06268061.1| cysteine--tRNA ligase [Prevotella bivia JCVIHMP010]
 gi|282588303|gb|EFB93468.1| cysteine--tRNA ligase [Prevotella bivia JCVIHMP010]
          Length = 495

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 164/506 (32%), Positives = 238/506 (47%), Gaps = 65/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++   
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLQHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDSDEGDDKIEKKARLEQLEPM------EIAQYYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRK 169
            L  L P+ +P AT HI +   L+  I+ +G+AYE+N  I FD +       YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEQLVDEIMKNGYAYESNGSIYFDVAKFNEDYKYGVLSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           +++    +R       K+N  DF LWKR+ P     W S W  G PGWH EC+AM   YL
Sbjct: 174 LNDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSKWSEGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GNHFDIHGGGIDLVFPHHECEIAQA-VASQGDEMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           ++E    + +   +++    IR  +L  HYR  +DF+ + L  ++    K          
Sbjct: 293 LSEFFTGSHEKLEQAYSPMTIRFFILSAHYRGTVDFSNEALQASQKGYEKLMNGIEDLSR 352

Query: 347 ID-----------------PAVLSALYNDLNTVSAIQALHKLAREST------------K 377
           +                       A+ +DL T + I +L +                   
Sbjct: 353 VQTSGESDTNTKQFVSTFRQKCYDAMNDDLMTPAVISSLFEACHVVNLLVDHKAQISADD 412

Query: 378 NHDLLPIFNASA-HILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIR 432
             +L  + N  A  ILG+   +   N     A    ++ ++  R      K ++ +D IR
Sbjct: 413 LKELSEVMNIFAFDILGLRNERSANNDAREEAFGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
             L   GF ++D K+         WK
Sbjct: 473 DALAEAGFNVKDTKD------GVTWK 492


>gi|312892185|ref|ZP_07751682.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
 gi|311295315|gb|EFQ72487.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
          Length = 486

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 152/495 (30%), Positives = 233/495 (47%), Gaps = 46/495 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++K+ +YNTL RK  EF+ ++  ++ MYVCGPTVY   H+GN R  I FD+++R L + 
Sbjct: 1   MEQKLFVYNTLTRKKEEFKPLNAPHVGMYVCGPTVYSDVHLGNCRTFISFDLIFRYLTHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDA----ISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      +    E                I  + T  F +       
Sbjct: 61  GYQ--VRYVRNITDAGHLEGDADEGEDKISKKAKIAKLEPMEIVQRYTVGFHEIMQVFNA 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I L++ I+  G AYE +  + FD        +YG  + R +D+ 
Sbjct: 119 LPPSIEPTATGHIIEQIELVKLILEKGFAYEVDGSVYFDVEKYNATQDYGILNGRNLDDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K    DF LW ++ P     W SPWG G PGWH+ECSAMS  YLG+ F
Sbjct: 179 LNNTRTLGGQDDKHGKLDFALWIKAKPEHLMKWPSPWGLGFPGWHLECSAMSHKYLGEQF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+  HH NEIAQ+  +      A  WIH   L + G+KMSKS GN    +EL
Sbjct: 239 DIHGGGIDLMPTHHTNEIAQNVASCGKNP-ALYWIHTNMLTVNGQKMSKSLGNSFLPHEL 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------- 337
              T     + +    +R  M+  HYR  +DF+ + +  +E    +              
Sbjct: 298 FAGTHSLLTKGYSPMTVRFFMMQAHYRSTLDFSNEAMEASEKGFKRLMNAFALVNGLKAS 357

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
            ++  +   +     +A+ +D N+   I  L ++++     HD     +           
Sbjct: 358 AESDVNVAELQSKCYAAINDDFNSPVLIAELFEISKIVNSVHDGKLKIDQNNLQLLQNIM 417

Query: 388 ---SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 ILG++  ++  N+ +   I+ ++  R    K   ++++D IR  L+  GF L+D
Sbjct: 418 QHFVVDILGLK-DEQAANEELPKVIDFIINLRSEAKKNMDYATSDKIRIGLQQIGFQLKD 476

Query: 445 YKNPDNGQRMTRWKQ 459
            K        T W +
Sbjct: 477 SK------EGTTWSK 485


>gi|327312789|ref|YP_004328226.1| cysteine--tRNA ligase [Prevotella denticola F0289]
 gi|326946352|gb|AEA22237.1| cysteine--tRNA ligase [Prevotella denticola F0289]
          Length = 495

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 168/506 (33%), Positives = 239/506 (47%), Gaps = 65/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   ++ MYVCGPTVY   H+G+ARP I FD+L+R LR+   
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           + +    +R       K N ADF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 LTDMINNSRELAGVGEKHNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GEHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + +      +   + +    IR  +L  HYR  +DF+ + L  AE    +          
Sbjct: 293 LEQFFTGRHETLMQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLAR 352

Query: 347 IDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKNHD 380
           I  +                    A+ +DL T + I  L +           +      D
Sbjct: 353 IQASAASDGNTGKFVSAFRKKCYEAMNDDLMTPAVISELFEACHLVNILIDHKAQISADD 412

Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIR 432
           L  +  A       ILG++  +   N     A    ++ ++  R      K ++ +D IR
Sbjct: 413 LKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
             L + GF ++D K+         WK
Sbjct: 473 DALSAAGFQVKDTKD------GVTWK 492


>gi|145630616|ref|ZP_01786395.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983742|gb|EDJ91192.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 369

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 152/365 (41%), Positives = 210/365 (57%), Gaps = 26/365 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDTLNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP++I +++ +I  GHAY A+  +++FD  S   YG  SR+ + + + G R+    
Sbjct: 114 ATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLGQLQAGARIEINE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 174 IKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQSCCA    +  N WIH+G + ++  KMSKS GNF TI ++L         + 
Sbjct: 234 HHENEIAQSCCAHGG-QYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVLN-------HYN 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A  +R  +L  HYR  ++++ + L  A+  L +                          A
Sbjct: 286 AEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFREA 345

Query: 355 LYNDL 359
           + +D 
Sbjct: 346 MDDDF 350


>gi|118472553|ref|YP_890296.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|187629830|sp|A0R558|SYC_MYCS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118173840|gb|ABK74736.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 477

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 156/482 (32%), Positives = 234/482 (48%), Gaps = 46/482 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++Y+T+   + +F  + P +  +Y+CG TV    HIG+ R  + FDVL R L    
Sbjct: 13  ELGLRLYDTMAGAVRDFVPLRPGHASIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTANG 72

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 73  YD--VAFIRNVTDIDDKILNKAAD------AGRPWWEWAATFERAFSAAYDALGVLPPSA 124

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QM+ LI+ +I  GHAY A  ++ FD  S+P+YG  S  +ID+   G  V  
Sbjct: 125 EPRATGHITQMVELIERLIDKGHAYAAGGDVYFDVLSLPDYGQLSGHRIDDVHQGEGVA- 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+
Sbjct: 184 -TGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGPEFDIHAGGMDLV 242

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+  A      A  W+HNG++ + G KMSKS GN ++I  +L+  +     
Sbjct: 243 FPHHENEIAQAHGAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR----- 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVL 352
             A  +R  +   HYR  ++F+   L +A    +              S   G   P   
Sbjct: 296 --AAELRYYLGSAHYRSMLEFSETALQDAVKAYTGIEDFLHRVCSRVGSVPIGEWTPKFA 353

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN- 402
           +AL +DL+   A+  +H    E  +  D               A   ILG +   E    
Sbjct: 354 AALNDDLSVPIALAEIHAARAEGNRALDSGDHQTAMQQASSIRAMMDILGCDPLNERWES 413

Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                   K + + ++  +  R    + + +++AD IR +L+  G  + D  +      +
Sbjct: 414 RDATSAALKAVDVLVQWALASRAEARERRDWAAADAIRDRLKEAGIEVTDTADGPQWALI 473

Query: 455 TR 456
            R
Sbjct: 474 ER 475


>gi|54022402|ref|YP_116644.1| cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|61216444|sp|Q5Z2R1|SYC_NOCFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|54013910|dbj|BAD55280.1| putative cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 467

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 155/480 (32%), Positives = 235/480 (48%), Gaps = 46/480 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T  R + EF  + P    +Y+CG TV    HIG+ R  + FDVL R L+ +  
Sbjct: 1   MTLRLFDTESRTMREFAPLVPGRASVYLCGATVQGEPHIGHVRSGVAFDVLRRWLQAH-- 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V ++RN+TDIDDKI+ +A +               +   + F +    L    P+ +
Sbjct: 59  DYDVWFIRNVTDIDDKILNKAAE------AGRPWWEWAATYERAFDRAYRLLGVQPPSAE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QM+ L++ +I  GHAY +   + FD  S P YG+ S  K+D+   G    E 
Sbjct: 113 PRATGHITQMVELMRRLIERGHAYASAGNVYFDVQSYPEYGALSGHKLDDVHQGESAGE- 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG  FDIH GG+DL+F
Sbjct: 172 -GKRDPRDFTLWKAAKPGEPSWPSPWGPGRPGWHLECSAMAEFYLGAEFDIHCGGMDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A      A  W+HNG++ + G KMSKS GN +++  +L   +      
Sbjct: 231 PHHENEIAQSKAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSVPNMLTKVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID-----PAVLS 353
            A  +R  +   HYR  ++++ + L +A     +      +T+   G I       A   
Sbjct: 283 -AVELRFYLGSAHYRSMLEYSDKALDDAVAGYQRIEAFLHRTAERVGEIPVGKWTDAFAE 341

Query: 354 ALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEHLN-- 402
           A+ +DL    A+  + +L  E  K           +L     A   ILG+       +  
Sbjct: 342 AMDDDLAVPRALAEVFRLVTEGNKALEAGAVDTARELGGQVRAMLGILGVCPFDPQWDHK 401

Query: 403 -------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                    + + +   +  R      K +++AD +R +L + G  + D  N       T
Sbjct: 402 QDDSVAQTALDVLVRAELDRRQQARADKDWATADAVRDRLHAAGIDVTDTPNGPEWSLRT 461


>gi|189485695|ref|YP_001956636.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|226735068|sp|B1GYT2|SYC_UNCTG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|170287654|dbj|BAG14175.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 465

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 165/478 (34%), Positives = 237/478 (49%), Gaps = 49/478 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IKI+NTL  K  EF     + + MYVCG T YD  H+G+AR  +VFD++ R L     
Sbjct: 1   MTIKIHNTLSNKKEEFYPQRGNFVSMYVCGITPYDEVHLGHARVYVVFDIVKRHLLRRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +++N TD+DDKI++R++++      N   S +     + +     RL  L     
Sbjct: 61  --IVKHIQNFTDVDDKIVKRSQEK------NMKPSELAQIYIEDYFVQAGRLNILKAEKY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P  T  IP+++  I+ ++  G AYE   +I F      +YG  S+R + + + G RV   
Sbjct: 113 PCVTQMIPEIVNFIKELVNKGLAYEIGGDIYFSVEKFKDYGKLSKRNLKDLRAGARVGVC 172

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K +  DF LWK++   EP    WESPWG+GRPGWHIECSAMSS  LG   DIHGGG D
Sbjct: 173 NGKNSAFDFALWKKTKENEPREVTWESPWGKGRPGWHIECSAMSSELLGDTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS      +K    WIHNGF+ +   KMSKS  NF T+  + E      
Sbjct: 233 LIFPHHENEIAQSEAKTG-KKFVKYWIHNGFVTINKEKMSKSLNNFFTLKAIFE------ 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------TSTS 343
             +   V+R  +L  HY  P+DF+   +  A   L                     T   
Sbjct: 286 -KYNPRVVRYYLLTQHYSSPLDFSDAGIESARNTLQGMDGTYLRLISSVKESDVEITDKD 344

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHI-LG 393
              +    LSAL +D N+  A+  LH+L    +K            L  +F   A   LG
Sbjct: 345 LSDLQGNFLSALDDDFNSEKALSYLHELKGLISKGLLTAGRERLSQLKKLFEDFAGTSLG 404

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILEDYKNPDN 450
           I + +E    N   +++ L++ER    K K ++ +D +RK +   +G+ + D K+  +
Sbjct: 405 ILLPEEQ---NADESLQNLLKERNDARKNKNWAESDRVRKLIIDERGYKIFDNKDGSS 459


>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
 gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
          Length = 528

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 182/536 (33%), Positives = 263/536 (49%), Gaps = 101/536 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +++++N++ +K   F+ +    +RMYVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 8   TPQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D  +L CL PT 
Sbjct: 68  YE--VEYVRNFTDIDDKIIKRANE------AGETVTSLSSRFINEFLLDMAQLQCLPPTC 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR T+HI  +I LI  I+ +G AY    ++ F   + P Y S S RK+D    G+RV  
Sbjct: 120 EPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAV 179

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLI
Sbjct: 180 DTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLI 239

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS  A    +    W+HNGF+N + +KMSKS+ NF TI ++++        
Sbjct: 240 FPHHENELAQSRAAYPESE-VKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDL------- 291

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
           +    +R  ++ THYR  ++ + + L  A   +    QT      +              
Sbjct: 292 YHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVPVP 351

Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
                         L ++ +DL T   +     L +    N +                 
Sbjct: 352 VEEQDMVNKHHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQQKLEQQKKKQQ 411

Query: 383 -----------------PIFNASAH----------ILGI-------EVCKEHLNKNI--- 405
                                A             ILG+       E  K+  +K +   
Sbjct: 412 QQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKALKRA 471

Query: 406 ---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                 +++ +++R    K K+F  +D IRKQL SKG  L D          T W+
Sbjct: 472 GLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPT------GTVWR 521


>gi|219681836|ref|YP_002468222.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|257471540|ref|ZP_05635539.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254765183|sp|B8D9R3|SYC_BUCA5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219624679|gb|ACL30834.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
          Length = 464

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 177/481 (36%), Positives = 249/481 (51%), Gaps = 48/481 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL      F  I  + + +YVCG TVYDF HIG+ R  +VFD++ R LR+   + 
Sbjct: 2   LKIFNTLTSTKEIFTPIKKNRVNLYVCGVTVYDFCHIGHGRTFVVFDMIVRYLRFSGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII ++ +E   I         T+   ++  KD   L    P  +PR
Sbjct: 61  -VKYVRNITDIDDKIISKSTKEKKKIN------TFTASMIKEMHKDFDLLGISVPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T++I  +I +I  +I   HAY   N ++IF   S PNYG+ SR+ +   + G+R+P   
Sbjct: 114 VTDYIDNIIRIITTLIKKKHAYIHKNGDVIFSIDSDPNYGTLSRQSLTSLESGSRIPLNN 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DFILWK S   E  W+SPWG+GRPGWHIEC+A+++ +     DIHGGG DL+FP
Sbjct: 174 MKKNPLDFILWKSSNKEEYSWDSPWGKGRPGWHIECTAITNVFFNNSIDIHGGGSDLLFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE +QS C +  +   N W+H G + L  +KMSKS GN   +  +L       +   
Sbjct: 234 HHENERSQSICFNN-KSMINFWMHTGMVILNNKKMSKSLGNVYFLRNIL-------KDCD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLSA 354
           A V+R   L THYR PI +  + L +A   L                      +    +A
Sbjct: 286 AEVLRYFFLSTHYRHPIYYCEKNLDQAYTSLKYLYTALYDTNPFFNNEEGLNFELEFYNA 345

Query: 355 LYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVC--KEHLNKN 404
           + +D NT +      K+AR+    KN D+L            A+ LG      KE L K 
Sbjct: 346 MNDDFNTPAVFSIFFKIARKINFLKNKDILKTNKFAFRLKYLANNLGFLFQDPKEFLQKK 405

Query: 405 IS------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +        I+ L+++R I  + K +  AD IRK+L S   ILED  +       T W+
Sbjct: 406 TTLNLLTLKEIQLLIEKRNIARQSKLWQEADNIRKKLMSLDIILEDLPDK------TIWR 459

Query: 459 Q 459
           +
Sbjct: 460 K 460


>gi|326798885|ref|YP_004316704.1| cysteinyl-tRNA synthetase [Sphingobacterium sp. 21]
 gi|326549649|gb|ADZ78034.1| cysteinyl-tRNA synthetase [Sphingobacterium sp. 21]
          Length = 487

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 154/489 (31%), Positives = 224/489 (45%), Gaps = 39/489 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + IYNTL RK   F+ I+P  + +YVCGPTVY   H+GN R  + FD++YR L   
Sbjct: 1   MSSNLVIYNTLSRKKEIFEPINPPMVGLYVCGPTVYSDVHLGNCRTFVSFDLIYRYL--L 58

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
           Y    V YVRNITD      +R   +                I  K T  F         
Sbjct: 59  YSGYKVRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLEPMEIVQKYTIGFHDVLRLFNT 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I +++ II +G+AYE N  + FD        +Y   + R++++ 
Sbjct: 119 LPPSIEPTATGHISEQIEMVKQIIANGYAYEVNGTVYFDVEKYSKNNDYTILTNRQLEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  KK   DF LW ++ P     W SPWG G PGWHIECSAMS+ YLG  F
Sbjct: 179 LNNTRELGGQDEKKGRLDFALWIKAKPEHIMRWPSPWGVGFPGWHIECSAMSNKYLGHQF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL   HH NEIAQS   +     A  W+H   L + G +MSKS GN     EL
Sbjct: 239 DIHGGGMDLAATHHTNEIAQSQACNHTNP-AKYWMHTNMLTVNGARMSKSAGNGFLPREL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------- 342
                    R +    +R  ML  HYR  +DF+ + L  ++    +              
Sbjct: 298 FTGDHPLLTRGYSPMSVRFFMLQAHYRSTLDFSNEALEASDKGYRRLMNAIALLPKLKAS 357

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------- 387
                    I    ++A+ +D N+   I  L ++ R     +D     +A          
Sbjct: 358 ASSEVDFEEIKQRFIAAMNDDFNSPVLIAELFEVVRIINSVYDNKTKIDAKGLAQLNTLV 417

Query: 388 ---SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                +ILG++  +   N ++   ++ +++ R      K ++++D IR  L+  GF L+D
Sbjct: 418 NDFVFNILGLKDDQTENNGDLEKLMDFIIKLRQEAKASKDYATSDLIRNSLQEMGFQLKD 477

Query: 445 YKNPDNGQR 453
            K      +
Sbjct: 478 SKEGTVWSK 486


>gi|154249366|ref|YP_001410191.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769335|sp|A7HKV1|SYC_FERNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|154153302|gb|ABS60534.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 470

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 161/479 (33%), Positives = 238/479 (49%), Gaps = 48/479 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+ I +TL +     + ++P  ++MYVCGPTVY++ HIGNARPM+VFD L R L +   
Sbjct: 2   TKVYITDTLSKSKVPLETLEPGVVKMYVCGPTVYNYIHIGNARPMVVFDALRRFLEFVGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V+N TDIDDKII  A++       N     +      ++  D   L   A  + 
Sbjct: 62  --RVIMVQNFTDIDDKIINEAKE------WNVDWKTVADTFIAEYFHDAQLLGVRAANYH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR T+ +  ++  I+ +I    AY A N ++ F    + +YG  S + +D+ + G RV  
Sbjct: 114 PRTTDFVKDIVEAIETMIKKDFAYPAENGDVYFSVRKLRDYGKLSGKNLDDLRAGARVDV 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KK+P DF+LWK + P EP W+SPW  GRPGWHIECS MS   LG +FDIHGGG DLI
Sbjct: 174 NELKKDPLDFVLWKSAKPGEPTWDSPWCNGRPGWHIECSVMSQKLLGDMFDIHGGGEDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHE+EIAQS      +  A  W+HNG + + G KMSKS GN   + E +       R 
Sbjct: 234 FPHHEDEIAQSEALTG-KPPAKYWMHNGMIIVRGDKMSKSLGNTFMVREAV-------RR 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTE----AE---ILLSKW---------PQTSTSKG 345
           +    ++L +L  HYR P++F+ + L +    A+     L+++         P+      
Sbjct: 286 YTKDGVKLFLLSKHYRSPMEFSDEILQDNMRAAQRVHNALNRFTEKYPYPLVPKIDEEME 345

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------AHILG-- 393
                 + AL +D NT  A+  L    +E  K+ D      A             +LG  
Sbjct: 346 NFIDRFVEALSDDFNTPVALSILFDTVKELNKSMDEGNDERALKMYHLVKRIYGPVLGVF 405

Query: 394 ---IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              I+  ++  ++ +   I+ ++  R    K K+F  AD +R  L +    L D     
Sbjct: 406 DSEIQKQQQVNSEQLDQLIQGIINLRNEYRKNKQFEIADKLRDALLNAKIKLLDTPEGT 464


>gi|328955961|ref|YP_004373294.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328456285|gb|AEB07479.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 488

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 185/503 (36%), Positives = 250/503 (49%), Gaps = 70/503 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY++  R   EF+ I+   +RMYVCGPTVYD AHIGNAR  I  D + R L     E 
Sbjct: 1   MRIYSSQTRVKREFKPIEAGRVRMYVCGPTVYDDAHIGNARTFITLDAIRRWLIASGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N+TD+DDKII RA  +        +   +  +  ++F+    R   L P  +PR
Sbjct: 60  -VTFVQNLTDVDDKIIGRAADQ------GRSAEQVAQQFAERFIDVMRRANVLDPDIRPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  IP MI +I+++I  GHAY A N ++ F   S P+YG  S R IDE  +G R+ E  
Sbjct: 113 ATREIPAMIEMIKSLIKQGHAYAAGNGDVYFSVRSDPSYGEVSGRDIDELMVGARIEENA 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W+SPWG GRPGWH EC+AM   +LG   DIHGGG DLIFP
Sbjct: 173 VKRDPLDFALWKAAKPGEPMWDSPWGPGRPGWHTECAAMVHRHLGCPIDIHGGGSDLIFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+ C    E  AN W+H G L ++G KMSKS GNF T+ E+L+          
Sbjct: 233 HHENECAQAECCWH-EGFANTWLHVGMLMVDGEKMSKSLGNFWTLEEVLDRH-------S 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDP------ 349
           A  +RL ML THYR P+DF+ +RL  A+  L +   T          + G  D       
Sbjct: 285 AAALRLLMLQTHYRTPLDFSFERLEGAQTSLGRIVSTVGNLRWASDRASGNPDASLAQGL 344

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNA 387
                         + +D NT  A+ A   LA  +    +   +                
Sbjct: 345 ARRMQIARSEFKEQMDDDFNTAGALGACFSLATAARSYLECAGVSVDASIALACVEFLEE 404

Query: 388 SAHILGIEVCKEHLN--KNISIAIEKLV---------------QERLILLKMKKFSSADY 430
           S  +LGIE+    L     +     +LV                 RL     + ++ AD 
Sbjct: 405 SFSVLGIELPASALELPAELVELAGRLVGYSGNDVAAAAEALLAARLDARIRRDWACADG 464

Query: 431 IRKQLESKGFILEDYKNPDNGQR 453
           IR +L   G  +ED       +R
Sbjct: 465 IRDELAQLGLSIEDTAAGPRLKR 487


>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
 gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
          Length = 522

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 183/516 (35%), Positives = 251/516 (48%), Gaps = 88/516 (17%)

Query: 3   KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + + ++NT+ R+   F   D     + MYVCG TVYD++HIG+AR  + FDVLYR L   
Sbjct: 8   QTLMLHNTMARRKEPFSPRDSTGKKVNMYVCGVTVYDYSHIGHARVYVAFDVLYRQLTRM 67

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  VTY RN TD+DDKII+RA +        +    +  +    F +D   L CL PT
Sbjct: 68  GYD--VTYCRNFTDVDDKIIKRANEN------GEECDALVDRFIAAFHEDIDALGCLRPT 119

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT+HI  ++ + + +I  G+AY A+ ++ F   ++P YGS S RK ++ + G RV 
Sbjct: 120 IEPRATDHIKDIVTMCERLIEKGYAYPADGDVYFSVDALPEYGSLSGRKQEDNRAGERVA 179

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM    LGK  DIHGGG DL
Sbjct: 180 VDDRKKNPADFALWKAAKPGEPTWDSPWGAGRPGWHIECSAMIDSILGKSIDIHGGGQDL 239

Query: 241 IFPHHENEIAQS-----CCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           +FPHHENE+AQS     CCA       E     W+HNGF+ ++  KMSKS GNF TI E+
Sbjct: 240 VFPHHENELAQSTASCRCCATDGDEPEEPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREV 299

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---- 347
            E        +    +R  +L THYR PI++T + L EA   L    QT     +     
Sbjct: 300 TE-------KYHPFALRWMLLGTHYRAPINYTQRALEEASDRLYYLYQTLVDSRVALTEA 352

Query: 348 ------------------------------DPAVLSALYNDLNTVSAIQALH-------- 369
                                           AV SAL +DLNT  A+ +L         
Sbjct: 353 EASATDAEVKGKPKPPTGVAAEGIELAVETKAAVASALTDDLNTPLAMASLSSPLKTLND 412

Query: 370 --------KLARESTKNHDLLPIFNASAHILGI------------EVCKEHLNKNISIAI 409
                   K    +    DL+     +   +G+             +            +
Sbjct: 413 LVSTKKGKKAVGRNVALRDLVKTVEETLEAVGLPHEGGEGLLEELRLLTLARAGLTQADV 472

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           ++ V +R      K F+ +D IR +L +KG  L D 
Sbjct: 473 DEAVAKRAEARAAKDFAESDRIRDELGAKGVALMDG 508


>gi|289426643|ref|ZP_06428372.1| cysteine--tRNA ligase [Propionibacterium acnes J165]
 gi|295129940|ref|YP_003580603.1| cysteine--tRNA ligase [Propionibacterium acnes SK137]
 gi|289160138|gb|EFD08313.1| cysteine--tRNA ligase [Propionibacterium acnes J165]
 gi|291375451|gb|ADD99305.1| cysteine--tRNA ligase [Propionibacterium acnes SK137]
 gi|332674781|gb|AEE71597.1| cysteine--tRNA ligase [Propionibacterium acnes 266]
          Length = 499

 Score =  497 bits (1280), Expect = e-138,   Method: Composition-based stats.
 Identities = 160/488 (32%), Positives = 231/488 (47%), Gaps = 60/488 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L        
Sbjct: 27  KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CSGYR 84

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT V N+TDIDDKI+ ++                      +       L C  PT++PRA
Sbjct: 85  VTVVANVTDIDDKILAKSAA------AGTPWWAHAYHYENELHAAYKALGCRPPTYEPRA 138

Query: 126 TNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE         +
Sbjct: 139 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAEDSDPR 198

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 199 -GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 257

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS  A      A+ W+HN ++ + G KMSKS GN   ++E+ +T     
Sbjct: 258 LRFPHHENELAQSAAA--GRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTKT----- 310

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------QTST 342
             +    +R  +L  HYR  I+F+         L EA   + +             +  T
Sbjct: 311 --YSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 368

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
           +   +  A + A+ +DL T  A+ AL     E  K+  +         L    A   + G
Sbjct: 369 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 428

Query: 394 IEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++               L   +   ++ ++ +R      K +++AD IR  L + G  +E
Sbjct: 429 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 488

Query: 444 DYKNPDNG 451
           D     + 
Sbjct: 489 DTPTGAHW 496


>gi|227502088|ref|ZP_03932137.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227077147|gb|EEI15110.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 468

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 155/481 (32%), Positives = 236/481 (49%), Gaps = 51/481 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R   +F+ I P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 2   STLRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  L P+ +
Sbjct: 62  D--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNLLGVLPPSVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE------ANNEIIFDTSSI-----PNYGSFSRRKID 171
           PRAT  + QM+  +Q +I  G AY       A   + FD  +       +YG+ S  +++
Sbjct: 114 PRATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDVEAWTKAEGSDYGALSGNRVE 173

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           E + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG  F
Sbjct: 174 EMEQGES--DNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGSNF 231

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I+ +
Sbjct: 232 DIHCGGLDLQFPHHENEIAQSHAA--GDKFANYWMHNHWVTMAGEKMSKSLGNVLSISNM 289

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGI 346
           LE  +          +R  +   HYR  ++++   LTEA     +            +G 
Sbjct: 290 LELVR-------PVELRYYLGSAHYRSVLEYSESALTEAAAGYRRIEGFVKRFAGVERGD 342

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
             P    A+ +D+    A+ A+H   R   K+                   AH+LG +  
Sbjct: 343 WTPDFEDAMNDDIAVPKALAAIHTTVRAGNKDLAAGDEDAARAKAAQVRGMAHVLGFDPL 402

Query: 398 KEH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +          +  +   ++  ++ R      K F++AD +R +L + G  + D  +   
Sbjct: 403 EWEDGGEASGADAALDALVQAELERRTQARAEKDFATADAVRDRLTAAGITITDTPDGPT 462

Query: 451 G 451
            
Sbjct: 463 W 463


>gi|150019973|ref|YP_001305327.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|187631644|sp|A6LJ41|SYC_THEM4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|149792494|gb|ABR29942.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 469

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 162/479 (33%), Positives = 231/479 (48%), Gaps = 44/479 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I I NT   K  +     P  ++MYVCGPTVY++ HIGNARP +VFD   R L Y   + 
Sbjct: 3   IYITNTESGKKEKLVPNTPGVVKMYVCGPTVYNYIHIGNARPAVVFDAFRRFLEYRGYK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TDIDDKII  A               +      ++ KD   L   A    PR
Sbjct: 62  -VVMVQNFTDIDDKIINEANA------WGVNFKDVADTFIAEYWKDAENLGIRAANFHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+++ +++  ++ +I   +AY A+  ++ F      +YG  S +K+++   G RV    
Sbjct: 115 TTDYVKEIVEAVEKLIAKNYAYVADNGDVYFSVKEFKDYGKLSGKKLEDLVAGARVEVSE 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KKNP DF LWK   P EP W+SPWG GRPGWHIECS MS   LG  FDIH GG DLIFP
Sbjct: 175 LKKNPLDFALWKAVKPGEPSWDSPWGNGRPGWHIECSVMSQRLLGDSFDIHAGGEDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE+E AQS      +  A  W+HNG +   G KMSKS GN   + E +       + + 
Sbjct: 235 HHEDEKAQSEALTG-KPFAKYWMHNGMIITRGDKMSKSIGNVFLVREAV-------KRYG 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKW---------PQTSTSKGII 347
              ++L +L  HYR PI+F+ + +   +         L+++         P+  T    +
Sbjct: 287 KDAVKLFLLSKHYRTPIEFSHEIMFNTKKAALRILNTLNRFEEKYPYPLVPKRDTFMNDM 346

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------AHILGI-EV 396
           +   + AL +D NT   I  + +L+++  K  D      A             +LGI E 
Sbjct: 347 EARFVEALEDDFNTPRVIALIFELSKDLNKAMDEGKEEEALKRYHLITRVFGSVLGIFER 406

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             + +  N    IE+++  R  L K K ++ AD IR  L   G  + D       +  T
Sbjct: 407 GLKVVETNNQKIIEEILSVRQELRKEKDYNVADKIRDALLRAGVKILDTSEGTKWEMNT 465


>gi|313765525|gb|EFS36889.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
 gi|313772927|gb|EFS38893.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
 gi|313793050|gb|EFS41117.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
 gi|313802500|gb|EFS43722.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
 gi|313806517|gb|EFS45024.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
 gi|313811065|gb|EFS48779.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
 gi|313814433|gb|EFS52147.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
 gi|313815074|gb|EFS52788.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
 gi|313817384|gb|EFS55098.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
 gi|313821872|gb|EFS59586.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
 gi|313824232|gb|EFS61946.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
 gi|313826599|gb|EFS64313.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
 gi|313828596|gb|EFS66310.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
 gi|313831829|gb|EFS69543.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
 gi|313834628|gb|EFS72342.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
 gi|313840141|gb|EFS77855.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
 gi|314915835|gb|EFS79666.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
 gi|314917110|gb|EFS80941.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
 gi|314921385|gb|EFS85216.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
 gi|314926686|gb|EFS90517.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
 gi|314931295|gb|EFS95126.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
 gi|314954883|gb|EFS99289.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
 gi|314958817|gb|EFT02919.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
 gi|314961109|gb|EFT05210.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
 gi|314964465|gb|EFT08565.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
 gi|314969564|gb|EFT13662.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
 gi|314974629|gb|EFT18724.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
 gi|314977177|gb|EFT21272.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
 gi|314980410|gb|EFT24504.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
 gi|314985726|gb|EFT29818.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
 gi|314987251|gb|EFT31342.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
 gi|314988860|gb|EFT32951.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
 gi|315078520|gb|EFT50551.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
 gi|315082016|gb|EFT53992.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
 gi|315082488|gb|EFT54464.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
 gi|315086199|gb|EFT58175.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
 gi|315087784|gb|EFT59760.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
 gi|315097463|gb|EFT69439.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
 gi|315099913|gb|EFT71889.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
 gi|315101774|gb|EFT73750.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
 gi|315110268|gb|EFT82244.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
 gi|327331451|gb|EGE73190.1| cysteine--tRNA ligase [Propionibacterium acnes HL096PA2]
 gi|327333438|gb|EGE75158.1| cysteine--tRNA ligase [Propionibacterium acnes HL096PA3]
 gi|327445542|gb|EGE92196.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
 gi|327447161|gb|EGE93815.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
 gi|327449804|gb|EGE96458.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
 gi|327454653|gb|EGF01308.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
 gi|327456727|gb|EGF03382.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
 gi|327457001|gb|EGF03656.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
 gi|328755708|gb|EGF69324.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
 gi|328756487|gb|EGF70103.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
 gi|328758784|gb|EGF72400.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
 gi|328761794|gb|EGF75307.1| cysteine--tRNA ligase [Propionibacterium acnes HL099PA1]
          Length = 490

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 160/488 (32%), Positives = 231/488 (47%), Gaps = 60/488 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L        
Sbjct: 18  KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CSGYR 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT V N+TDIDDKI+ ++                      +       L C  PT++PRA
Sbjct: 76  VTVVANVTDIDDKILAKSAA------AGTPWWAHAYHYENELHAAYKALGCRPPTYEPRA 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE         +
Sbjct: 130 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAEDSDPR 189

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 190 -GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 248

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS  A      A+ W+HN ++ + G KMSKS GN   ++E+ +T     
Sbjct: 249 LRFPHHENELAQSAAA--GRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTKT----- 301

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------QTST 342
             +    +R  +L  HYR  I+F+         L EA   + +             +  T
Sbjct: 302 --YSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 359

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
           +   +  A + A+ +DL T  A+ AL     E  K+  +         L    A   + G
Sbjct: 360 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 419

Query: 394 IEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++               L   +   ++ ++ +R      K +++AD IR  L + G  +E
Sbjct: 420 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 479

Query: 444 DYKNPDNG 451
           D     + 
Sbjct: 480 DTPTGAHW 487


>gi|325268337|ref|ZP_08134970.1| cysteine--tRNA ligase [Prevotella multiformis DSM 16608]
 gi|324989479|gb|EGC21429.1| cysteine--tRNA ligase [Prevotella multiformis DSM 16608]
          Length = 495

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 167/506 (33%), Positives = 238/506 (47%), Gaps = 65/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ     ++ MYVCGPTVY   H+G+ARP I FD+L+R LR+   
Sbjct: 2   QDLVIYNTLHRKKELFQPTAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L P+ +P AT HI +   L++ I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 ALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           + +    +R       K N ADF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 LTDMINNSRELAGVGEKHNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+ FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GEHFDIHGGGMDLIFPHHECEIAQA-VASQGDQMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + +      +   + +    IR  +L  HYR  +DF+ + L  AE    +          
Sbjct: 293 LEQFFTGRHETLTQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLAR 352

Query: 347 IDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKNHD 380
           I  +                    A+ +DL T + I  L +           +      D
Sbjct: 353 IQASAASDGNTGKFVSAFRKKCYEAMNDDLMTPAVISELFEACHLVNILIDHKAQISAGD 412

Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIR 432
           L  +  A       ILG++  +   N     A    ++ ++  R      K ++ +D IR
Sbjct: 413 LKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
             L + GF ++D K+         WK
Sbjct: 473 DALSAAGFQVKDTKD------GVTWK 492


>gi|167045369|gb|ABZ10025.1| putative tRNA synthetases class I (C) catalytic domain protein
           [uncultured marine microorganism HF4000_APKG10F13]
          Length = 447

 Score =  497 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 161/468 (34%), Positives = 232/468 (49%), Gaps = 58/468 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVY+  H+G+AR  + FD + R L +      V +++N TDIDDKII RA +E 
Sbjct: 1   MYVCGLTVYNDMHLGHARSYVSFDAIRRWLEHSGY--SVEHIQNHTDIDDKIIARAAEE- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                  A + +  +   +   D T L  L P   PRAT ++ QM+ +I +++  GHAY 
Sbjct: 58  -----GVAPADLAERYIARTTADLTALGVLPPHQMPRATAYVEQMVAVIADLLAKGHAYV 112

Query: 148 ANN-------EIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
           A         ++ FD  S+   +G+ + + ++E + G RV     K NPADF LWK +  
Sbjct: 113 AEPAEGALAPDVYFDVPSAREQFGTLTGQSLEELEAGARVAVDPRKHNPADFALWKGARE 172

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP W+SPWG GRPGWHIECSAMS   LG  FDIHGGG DL FPHHE+EI Q+ C     
Sbjct: 173 GEPSWDSPWGTGRPGWHIECSAMSLTLLGPQFDIHGGGSDLKFPHHESEILQTECHTGKH 232

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
                W+H GFL ++  KMSKS  NF  + ++L+          A V+R  +L  HYR P
Sbjct: 233 PMVKYWLHTGFLTVDEEKMSKSLDNFFLVRDVLQYA-------SAEVVRFYLLNAHYRSP 285

Query: 320 IDFTVQRLTEAEILLSKWPQTS-----------------TSKGIIDPAVLSALYNDLNTV 362
           IDF+   L EA     +   T                   +         +A+ +D NT 
Sbjct: 286 IDFSDAALDEAASAHDRLAATLHRYRTASGGDRQPEALHDAVTTARADFTTAMDDDFNTR 345

Query: 363 SAIQALHKLARESTKNH----------DLLPIFNASA-HILGIEVCKEHLNKNISIAIEK 411
            A+ AL  LARE+ +             ++  F      +LG+   +E         IE 
Sbjct: 346 EALAALFGLAREANRYEPGTLDSELRDAVVAAFEELGGEVLGLFAPREATGPG-DAEIEA 404

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ +R      K+++ AD IR +L ++G  ++D  +        RW++
Sbjct: 405 LLAQREAARAAKEWAEADRIRDELTAQGIEVQDTPD------GVRWRR 446


>gi|260062016|ref|YP_003195096.1| cysteinyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
 gi|88783578|gb|EAR14749.1| cysteinyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
          Length = 492

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 145/487 (29%), Positives = 219/487 (44%), Gaps = 41/487 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +K++N+L      F  I   ++ MYVCGPTVY   H+GN R  + FD+++R LR+  
Sbjct: 6   EQTLKVHNSLTGTKETFTPIHEGHVGMYVCGPTVYSNVHLGNCRTFMSFDLIFRYLRHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V +VRNITD     DD      +    +         +  + T  F     R   L
Sbjct: 66  YK--VRFVRNITDAGHLEDDADQGEDKIAKKARLEKIEPMEVVQRYTVDFHNILQRFNLL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ I+  G+AYE N  + FD         YG  S RK+++  
Sbjct: 124 PPSIEPTATGHIVEQIEIIKVIMGRGYAYEKNGSVYFDVKRFNQDYEYGKLSGRKLEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K+NP DF LWK++ P     W SPWG G PGWH+EC+ MS+ YLG  FD
Sbjct: 184 ANTRELTAQDEKRNPQDFALWKKAEPQHIMRWPSPWGEGFPGWHLECTVMSTKYLGDTFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+   +        W+H   L L G+KM+KS GN +   E+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQAEAGNDQSP-VRYWLHANMLTLNGKKMAKSTGNNLLPGEIF 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
                   + +   V+R  M+  HY   +D + + L  AE   ++  +            
Sbjct: 303 SGENDILSKPFAPTVVRFFMMQAHYTSILDLSDEALLAAEKGYNRLMEAMEQLPGLPTGK 362

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
                          A+ +D N+   I  L +  +      D            L     
Sbjct: 363 TSDFDVAAWRQRCYDAMNDDFNSPVLIAQLFEAVKTINLVRDGKQSLSPADRDTLQETME 422

Query: 387 ASA-HILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             A  +LG+E  +      + +   ++ ++  R      K + ++D IR  L   G  L+
Sbjct: 423 GFAFEVLGLEPGRSQTQETEKLEGVMKLVIDLRNQARANKDYHTSDQIRDTLSELGIQLK 482

Query: 444 DYKNPDN 450
           D K    
Sbjct: 483 DGKEGTT 489


>gi|289424245|ref|ZP_06426028.1| cysteine--tRNA ligase [Propionibacterium acnes SK187]
 gi|289154942|gb|EFD03624.1| cysteine--tRNA ligase [Propionibacterium acnes SK187]
          Length = 486

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 160/488 (32%), Positives = 231/488 (47%), Gaps = 60/488 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L        
Sbjct: 14  KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CSGYR 71

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT V N+TDIDDKI+ ++                      +       L C  PT++PRA
Sbjct: 72  VTVVANVTDIDDKILAKSAAAGTPWW------AHAYHYENELHAAYKALGCRPPTYEPRA 125

Query: 126 TNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE         +
Sbjct: 126 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAEDSDPR 185

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 186 -GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 244

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS  A      A+ W+HN ++ + G KMSKS GN   ++E+ +T     
Sbjct: 245 LRFPHHENELAQSAAA--GRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTKT----- 297

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------QTST 342
             +    +R  +L  HYR  I+F+         L EA   + +             +  T
Sbjct: 298 --YSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 355

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
           +   +  A + A+ +DL T  A+ AL     E  K+  +         L    A   + G
Sbjct: 356 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 415

Query: 394 IEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++               L   +   ++ ++ +R      K +++AD IR  L + G  +E
Sbjct: 416 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 475

Query: 444 DYKNPDNG 451
           D     + 
Sbjct: 476 DTPTGAHW 483


>gi|42525611|ref|NP_970709.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|61216253|sp|Q73RJ6|SYC_TREDE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|41815622|gb|AAS10590.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|325475275|gb|EGC78460.1| cysteinyl-tRNA synthetase [Treponema denticola F0402]
          Length = 492

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 172/506 (33%), Positives = 249/506 (49%), Gaps = 64/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K++NTL  K  EF  I      +Y CGPTVYD+AHIGN R  +  D+L + LR+   
Sbjct: 1   MSLKLHNTLGNKKEEFIPIHEGKAGVYGCGPTVYDYAHIGNLRTYVFQDILVKTLRFLGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  VT+V NITD+    DD+     +    +     ++  I    T+ F  DT RL    
Sbjct: 61  D--VTHVMNITDVGHLTDDEDSGEDKMVKSAEERGKSVLEIAEFYTKAFFNDTERLNIER 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P    +AT HI +MI LI+ I  +GH Y A   + +D S+ P YG  +   +++ K G R
Sbjct: 119 PGIVCKATEHINEMIELIKRIEANGHTYMAGGNLYYDISTFPKYGELANINLEDLKAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           +    +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+  DIH 
Sbjct: 179 IEIDKNKRNPHDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGEQIDIHK 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQS  A   +K  N W+HN FL +   KMSKS G+FI + +++   
Sbjct: 239 GGIDHIRVHHTNEIAQSEGATG-KKWVNYWLHNEFLVMNKGKMSKSAGSFIILEDVIN-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIID 348
               + + A   R  +L  HYR  + F+ + +  A+         ++KW    +   I++
Sbjct: 296 ----KGFSALDYRFLLLGGHYRSQLTFSWEAMETAKNGRKNLNNRVAKWLDGLSDSEIME 351

Query: 349 PA--------------------------VLSALYNDLNTVSAIQALHKLARESTK-NHDL 381
            A                           ++A+ +DL+T  A+  L  L +E      D+
Sbjct: 352 YAALTENLNLKSAKDMIKNEKARSCFDNFIAAMEDDLSTPKALSELQLLIKEKDIPQKDV 411

Query: 382 LPIFNASAHILGIEVCKEHLN--------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           L +  A   ILGI++ +E  N        +     I KL++ER      K +  AD IR 
Sbjct: 412 LTVLAAMDSILGIKLIEESFNTLKDKGSIEIDESEILKLIEERASAKLDKNYKLADEIRD 471

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
           +L+  G ILED          T WK+
Sbjct: 472 KLKGMGIILEDQ------AGKTTWKK 491


>gi|86141205|ref|ZP_01059751.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
 gi|85831764|gb|EAQ50219.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
          Length = 495

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 162/488 (33%), Positives = 233/488 (47%), Gaps = 42/488 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K++IK+YN+L      F+ +   N+ MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 7   KQEIKVYNSLSGSKETFKPLLEGNVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHLG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD      +    E                +  + T  F     +  CL
Sbjct: 67  YK--VRYVRNITDAGHLTDDADEGEDKIAKKARLEQIEPMEVVQQYTIDFHTILQKFNCL 124

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ II +G AYE N  + FD        +YG  S R +++  
Sbjct: 125 PPSIEPTATGHIIEQIEIIKEIIDNGFAYEKNGSVYFDVLKFNESHDYGKLSGRNLEDMI 184

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  KKN  DF LWK++ P     W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 185 ANTRELTAQSEKKNAQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKYLGEQFD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQS  ++      N W+H   L L G+KMSKS+GN I   ++ 
Sbjct: 245 IHGGGMDLKFPHHECEIAQSEASNGKNP-VNYWLHANMLTLNGKKMSKSDGNNIFPAQIF 303

Query: 293 ETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
                F  + +   V R  ++  HYR  +DF+   L  +E   ++  +            
Sbjct: 304 TGDSPFLTKGFSPSVARFFVMQAHYRSVLDFSNDALLASEKGFNRLMEAVNLLEALPTSE 363

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARES------------TKNHDLLPIFN 386
             S    I   +   A+ +D N+   I  L + A+              T   D      
Sbjct: 364 KSSIDVEIWKQSCYDAMNDDFNSPILIAQLFEAAKFIHQIKDSKAAITQTDLEDFKTTIK 423

Query: 387 AS-AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           A    +LG+E      E     ++ AIE L+Q R      K F+++D IR QL   G  L
Sbjct: 424 AFVFDVLGLEDVNAAAEANTDKLNGAIELLIQLRKEARANKDFATSDQIRDQLLELGIQL 483

Query: 443 EDYKNPDN 450
           +D +    
Sbjct: 484 KDGREGTT 491


>gi|302346055|ref|YP_003814408.1| cysteine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
 gi|302150108|gb|ADK96370.1| cysteine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
          Length = 495

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 170/506 (33%), Positives = 236/506 (46%), Gaps = 65/506 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL RK   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++   
Sbjct: 2   QDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQHYTNRYHDAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L P+ +P AT HI +   L+  I+ +G+AYE+N  I FD        +YG  S R 
Sbjct: 114 SLNVLPPSIEPHATGHIIEQEELVNQILANGYAYESNGSIYFDVEKYDKDHHYGVLSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           I +    +R       K N  DF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 ITDMINNSRELAGVDEKHNQIDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIHGGG+DLIFPHHE EIAQ+  A + ++    W+HN  + + G+KM KS GNFIT
Sbjct: 234 GDHFDIHGGGMDLIFPHHECEIAQA-VASQGDEMVKYWMHNNMITINGQKMGKSLGNFIT 292

Query: 288 INELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + +          +++    IR  +L  HYR  +DF+ + L  AE    +          
Sbjct: 293 LEQFFTGEHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLAR 352

Query: 347 IDPA-----------------VLSALYNDLNTVSAIQALHKLA---------RESTKNHD 380
           I PA                    A+ +DL T + I  L +           +      D
Sbjct: 353 IQPAAASDENTKKFVAGFRQKCYDAMNDDLMTPAVISTLFEACHLVNILIDHKAQISADD 412

Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIR 432
           L  +  A       ILG++  +   N     A    ++ ++  R      K ++ +D IR
Sbjct: 413 LKELTEAMQLFAFDILGLQNERGANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQIR 472

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
             L   GF ++D K+         WK
Sbjct: 473 DALAEAGFQVKDTKD------GVTWK 492


>gi|319762811|ref|YP_004126748.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|330824891|ref|YP_004388194.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|317117372|gb|ADU99860.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|329310263|gb|AEB84678.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 458

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 175/490 (35%), Positives = 245/490 (50%), Gaps = 69/490 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + +F  ++  ++RMYVCG TVYD  H+G+AR MI FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRALEDFSPLEAGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    PTH+
Sbjct: 61  --AVTYVRNITDIDDKIIRRA------VENGETIRSLTDRMIDALHEDADALGIERPTHE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ +I  +   G AY+A N ++ +     P YG  S + +DE   G RV  
Sbjct: 113 PRATEYVPQMLSMIGTLQSRGLAYQAANGDVNYAVRKFPGYGRLSGKSLDELNAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K +P DF+LWK + P EP    W+S +G GRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 173 QDGKLDPLDFVLWKGAKPEEPAEVKWQSAYGEGRPGWHIECSAMGCTLLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A +W+HNGF+N++  KMSKS GNF TI ++L      
Sbjct: 233 DLAFPHHENEIAQSEGATG-KPFARVWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA---- 350
            + + A  +R  ++ +HYR P++++   L +A   L +        + +   ID A    
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSDVHLDDARAALKRLYTALSLVAPAPVAIDWAEPHA 344

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNH--------------------DLLPIFNAS 388
               +A+  D  T  A+  L  LA E  ++                     D      A 
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSPGAAGLLKALGGHLGLLQGDPQAFLKAG 404

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           A   G++            A +                  D IR  L ++G +L+D    
Sbjct: 405 A---GLDEPAIQARIAARAAAKAAKNFAEA----------DRIRADLLAQGIVLKDSAA- 450

Query: 449 DNGQRMTRWK 458
                 T W+
Sbjct: 451 -----GTTWE 455


>gi|327334964|gb|EGE76675.1| cysteine--tRNA ligase [Propionibacterium acnes HL097PA1]
          Length = 487

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 160/488 (32%), Positives = 231/488 (47%), Gaps = 60/488 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YNT    I  F+ +    + +Y CG TV    H+G+ R  +VFDVL R L        
Sbjct: 15  KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CSGYR 72

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT V N+TDIDDKI+ ++                      +       L C  PT++PRA
Sbjct: 73  VTVVANVTDIDDKILAKSAAAGTPWW------AHAYHYENELHAAYKALGCRPPTYEPRA 126

Query: 126 TNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HIP+MI L++ +I  GHAY A   + ++ FD  S P YG  S  ++DE         +
Sbjct: 127 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRVDEMSPAEDSDPR 186

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 187 -GKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 245

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS  A      A+ W+HN ++ + G KMSKS GN   ++E+ +T     
Sbjct: 246 LRFPHHENELAQSAAA--GRPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVTKT----- 298

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------QTST 342
             +    +R  +L  HYR  I+F+         L EA   + +             +  T
Sbjct: 299 --YSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 356

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
           +   +  A + A+ +DL T  A+ AL     E  K+  +         L    A   + G
Sbjct: 357 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 416

Query: 394 IEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++               L   +   ++ ++ +R      K +++AD IR  L + G  +E
Sbjct: 417 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 476

Query: 444 DYKNPDNG 451
           D     + 
Sbjct: 477 DTPTGAHW 484


>gi|86138285|ref|ZP_01056859.1| cysteinyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824810|gb|EAQ45011.1| cysteinyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 469

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 205/464 (44%), Positives = 272/464 (58%), Gaps = 23/464 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK +EF  ID +N+RMY+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG  
Sbjct: 8   IKLHNTKTRKKSEFTPIDANNVRMYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHCYGAD 67

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQ---QFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A     +        ++  +  +    ++ D  +L  L P H
Sbjct: 68  HVTYVRNFTDVDDKINATALARKAAGAAGTLEELVAERTEETIGWYLSDMGKLGALEPGH 127

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PRAT +I QM+ +IQN+I  GHAY +    ++F   S  NYG  S R +D+   G RV 
Sbjct: 128 MPRATQYIRQMVTMIQNLIAKGHAYADGAGHVLFSVKSYENYGQLSGRSVDDMIAGARVE 187

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG DL
Sbjct: 188 VADNKRDPMDFVLWKPSTEELPGWDSPWGRGRPGWHIECSAMSQELLGATFDIHAGGNDL 247

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA+  +  A  W+HN  L +EG+KMSKS GNF T+++LL+      +
Sbjct: 248 MFPHHENEIAQSCCANGDDSFARYWLHNEMLQVEGKKMSKSLGNFFTVHDLLD------Q 301

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYN 357
             P  VIR   L THYR+P+D+T ++  EAE  L KW   +           AVL AL +
Sbjct: 302 GIPGEVIRFVFLQTHYRKPMDWTEKKAKEAEATLRKWRALTAGIEPAANAAAAVLDALAD 361

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--EVCKEHL---NKNISIAIEKL 412
           DLNT  AI  +HKLA          P   ASA ++G+  E   +     + ++S    +L
Sbjct: 362 DLNTAGAIAEMHKLAAAGDG-----PGLLASAQLMGLLSEALGDWAATPDLDLSAYATQL 416

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
           +  R   ++ K FS  D ++    + G  +   K         R
Sbjct: 417 LDARETAMQSKDFSQVDRLKAAFVAAGLEVRMSKAGVELVPGPR 460


>gi|134281981|ref|ZP_01768687.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134246510|gb|EBA46598.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 444

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 181/458 (39%), Positives = 245/458 (53%), Gaps = 46/458 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++AHIGNARP +VFDVL RLLR+      V Y RN TD+DDKI   A    
Sbjct: 1   MYVCGPTVYNYAHIGNARPAVVFDVLSRLLRH--DYPQVVYARNFTDVDDKINAAA---- 54

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +     I  IT +    +  D   L  L+P  +PR T HIP +I LI+ ++  GHAY 
Sbjct: 55  --VAAGVPIGTITDRYIDAYHADMQALGVLSPELEPRVTEHIPAIIELIETLLARGHAYV 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
               ++F   S P YG  S R+ ++   G RV    +K++P DF+LWK STP  PGW+SP
Sbjct: 113 VQGHVLFHVPSYPEYGHLSGRRTEDMLAGARVEVAPYKRDPLDFVLWKPSTPDLPGWDSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WGRGRPGWH+ECSAM   +LG   DIHGGG DLIFPHHENEIAQ  CA         W+H
Sbjct: 173 WGRGRPGWHVECSAMIGQHLGHTIDIHGGGQDLIFPHHENEIAQGTCAHGT-LYCRTWVH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           N F+ ++G+KMSKS GN + + +LL          P   IRLA+L THYR P+D+  QRL
Sbjct: 232 NSFVTVDGQKMSKSLGNVLLVRDLLA-------QAPGEAIRLALLSTHYRRPLDWNAQRL 284

Query: 328 TEAEILLSKWPQTSTSKGII--------DPAVLSALYNDLNTVSA-------IQALHKLA 372
           + A   L+++ ++ +    +        DP +L AL NDLN   A       +  L    
Sbjct: 285 SAARQTLTRYYESLSKVAQVAVVPQIAADPQLLEALRNDLNVPGALVRLHVLLTVLDDAD 344

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHL--------------NKNISIAIEKLVQERLI 418
            ++ + H    +   SA +LG+                            I+ L+ ER  
Sbjct: 345 TDAERAHAKSALL-TSAALLGLLQQPPQAALAQLRPAAPATAVQGLGDTRIKALLAEREQ 403

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             + + F+ AD +R+ LE+ GF +ED       +  T+
Sbjct: 404 ARRDRDFAKADALRETLEAAGFTIEDTPAGSVLRPATK 441


>gi|119960845|ref|YP_946695.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|166200128|sp|A1R383|SYC_ARTAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119947704|gb|ABM06615.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 484

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 165/491 (33%), Positives = 239/491 (48%), Gaps = 54/491 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T   ++ +F  ++     +Y CG TV    H+G+ R  I FD L R L +   
Sbjct: 1   MTLRFYDTASAEVRDFVPLEDGKASVYYCGATVQGMPHVGHVRSAIAFDQLTRWLEFRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDA-------ISIITSKNTQQFVKDTTRLA 115
              VT VRN+TDIDDKI+ ++ Q        +           +  +  Q+F      L 
Sbjct: 61  --RVTVVRNVTDIDDKILAKSAQSFGPDWDAEPSARQTEEWWALAYRYEQEFENAYESLG 118

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDE 172
              PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YGS +R+ ID+
Sbjct: 119 VQRPTYEPRATGHIPEMHTLIQRLIDRGHAYPALDDSGDVYFDVRSWSKYGSLTRQNIDD 178

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
            + G    +   K++P DF LWK     EP    WESPWG GRPGWH+ECSAM + YLG 
Sbjct: 179 MQ-GAPDADPRGKRDPRDFALWKGFKDGEPVTAKWESPWGAGRPGWHLECSAMVTKYLGP 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGGLDL FPHHENE+AQS  A   ++ AN W+HNG +  EG KMSKS GN ++  
Sbjct: 238 RFDIHGGGLDLRFPHHENEMAQSQAA--GDEFANFWMHNGMVTYEGEKMSKSIGNTVSPA 295

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTS 343
           E+LE            V+R  +   HYR  +D+    L EA   + +         +   
Sbjct: 296 EMLELA-------SPRVVRYYLGQAHYRSILDYRPTSLQEAAAAVERIDGFIHKASSKVG 348

Query: 344 KGIID--------PAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFN 386
            G  D         A ++A+ +DLN   A+  LH+  R                 L    
Sbjct: 349 TGAPDVSPQANMPAAFIAAMDDDLNVPQALGVLHETVRAGNTALASGDLEGAKAALYSVL 408

Query: 387 ASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +   +LG+      E  +   +  + + IE  ++ R      K ++++D IR  L + G 
Sbjct: 409 SMTEVLGLDSVKRPEAVQGREHAALEVLIEAQLEARAAARANKDWAASDAIRDTLAAAGV 468

Query: 441 ILEDYKNPDNG 451
           ++ED  +    
Sbjct: 469 VVEDGADGATW 479


>gi|300870684|ref|YP_003785555.1| cysteinyl tRNA-synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688383|gb|ADK31054.1| cysteinyl tRNA-synthetase [Brachyspira pilosicoli 95/1000]
          Length = 469

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 171/489 (34%), Positives = 249/489 (50%), Gaps = 54/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK YN+L R+  EF+ ++   + MY CGPTVY++AHIGN R  I  D++ R+L  Y    
Sbjct: 2   IKFYNSLTRQKEEFKPMNEKEVGMYSCGPTVYNYAHIGNFRAYIFSDLVRRVLEDYGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N+TD+DDK I  +++ H       ++S  T K    F +D   L     T  P 
Sbjct: 61  -VKLVMNLTDVDDKTIRNSKENH------ISLSEYTKKYKDAFFEDIKTLRIKPATVNPS 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT HI +MI +I+ +  +GH YEA+  I F  S+ P YG  +     E K G       +
Sbjct: 114 ATEHINEMIDIIKLLEKNGHTYEADGSIYFKISTFPEYGELANLDKQELKEGASGRVSSD 173

Query: 182 KYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           +Y K+N +DF+LWK  T    +  W+SP+G+GRPGWHIECSAMS  YLGK FDIH GG+D
Sbjct: 174 EYDKENASDFVLWKAYTEEDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
             FPHHENEIAQ+  A   EK  N W+H   L ++G KMSKS GNF T+ +LL       
Sbjct: 234 NKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLN------ 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----------------T 342
           +   A  IR +++ +HYR+ ++FT++ + +++  + +                       
Sbjct: 287 KGLSAEAIRYSLMNSHYRKQLNFTIEGINQSQSAIDRVNDLIFRLKDVNKTDADDSAVMK 346

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                +     ++Y+DLN   A+       +    + D + + +  A I  IE     +N
Sbjct: 347 ELEEANKNFFESIYDDLNVSEALGVFFSFIKSINISFDSINVSSRDAIIKFIERVNNIIN 406

Query: 403 -----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                       +    I KL++ER +  K K +  AD IR +L S G  + D  N    
Sbjct: 407 CFNMNGEKEIESSEEEKINKLIEERTLAKKEKNYKRADEIRDELNSMGIEIMDTPN---- 462

Query: 452 QRMTRWKQK 460
               RWK+K
Sbjct: 463 --GVRWKRK 469


>gi|46198845|ref|YP_004512.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|61216249|sp|Q72KB0|SYC_THET2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46196468|gb|AAS80885.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 480

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 158/494 (31%), Positives = 241/494 (48%), Gaps = 55/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IY+TL R+   F+   P ++ +YVCGPTVY   H+G+AR  +V+D+L R   +   
Sbjct: 1   MGLVIYDTLARRKVPFEPAVPGHVGIYVCGPTVYSDPHLGHARGPVVYDILRRYFLHKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V +V NITD+     +    E   +            +  K    +      L  L 
Sbjct: 61  K--VRFVSNITDVGHLTDDADEGEDKIVRRAKLERLEPMEVADKYMWSYFDAMQALNVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P+  PRA+ HIP+M+ L + ++  GHAYE    + F   S P YG  S ++++E + G R
Sbjct: 119 PSIAPRASGHIPEMLELTERLLARGHAYERKGSVYFRVRSFPEYGKLSGKRLEELRAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           V  +  K++P DF LWK + P     W+SPWG G PGWHIEC+AMS  YLG+ FD+H GG
Sbjct: 179 VEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGFDLHAGG 238

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++LLE  + 
Sbjct: 239 IDLQFPHHECEIAQAEAA--GFRFARHWMHHNHVLLEGEKMAKSTGNLVLLHDLLEAHE- 295

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------P 338
                    +R  +L THYR P+DFT + L  A+    +                    P
Sbjct: 296 ------PMALRFYLLQTHYRSPMDFTWEGLESAKRGYGRLLHAYREVRGRKKTAPPGTTP 349

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILG 393
           +   +   ++ A + A+ +DL+T  A+ AL     E  K       + L    A  H LG
Sbjct: 350 ELERALDALEKAFMEAIEDDLSTPEALAALFAFLPELHKLLPEAKAESLARAEAVFHTLG 409

Query: 394 IEVCKEHLNKNISIAI---------EKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
             +      + +   +           L++ R    + K +  +D IR++L + G I+ED
Sbjct: 410 EGILGLFPERVLEERVSGPLLEGLIALLLELREEARRAKDYEKSDLIRERLRALGVIVED 469

Query: 445 YKNPDNGQRMTRWK 458
            K         RW+
Sbjct: 470 TKEGP------RWR 477


>gi|41406576|ref|NP_959412.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|61216572|sp|Q743W3|SYC_MYCPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|41394925|gb|AAS02795.1| CysS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 468

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 150/480 (31%), Positives = 228/480 (47%), Gaps = 46/480 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RPRLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIALG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 64  YD--VAFIRNVTDIDDKILNKAAA------AGRPWWEWAATYERAFSAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QM+ LI+ +I  GHAY  + ++ FD  S P YG  S  +ID+   G  V  
Sbjct: 116 EPRATGHITQMVELIERLIEKGHAYTGDGDVYFDVLSYPEYGQLSGHRIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH EC AM+  YLG  FDIH GG+DL+
Sbjct: 175 -SGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMAHEYLGPEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVL 352
                +R  +   HYR  ++F+   L +A              +    +   G  +P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSDTALQDAVKAYVGVEEFLHRVRVRVGAVEPGEPNPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN- 402
            AL +DL   +A+  +H+   E  +  D               A   ILG +   E    
Sbjct: 345 DALNDDLAVPAALAEVHQARAEGNRALDSGDHEGALRQARSIRAMMGILGCDPLHERWET 404

Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                     + + +   +Q R    + + ++ AD IR +L+  G  + D  +       
Sbjct: 405 RDETSAALAAVDVLVRAELQNREKAREQRNWALADEIRNRLKQAGIEVTDTADGPQWTLG 464


>gi|255325868|ref|ZP_05366960.1| cysteine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297080|gb|EET76405.1| cysteine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
          Length = 462

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 156/475 (32%), Positives = 230/475 (48%), Gaps = 45/475 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IY+T  R   +F  I P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 2   STLRIYDTATRSQRDFDPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  + P+ +
Sbjct: 62  D--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVIPPSVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
           PRAT  + QM+  +Q +I  G AY A+  + FD ++       +YGS S  K++E + G 
Sbjct: 114 PRATGFVTQMVDYMQRLIDAGFAYPADGSVYFDVAAWTKAEGSDYGSLSGNKVEEMEQGE 173

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              E   K+   DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIH GG
Sbjct: 174 --GEDSAKRGAQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSNFDIHCGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I  +LE  + 
Sbjct: 232 LDLQFPHHENEIAQSHAA--GDKFANYWMHNHWVTMSGEKMSKSLGNVLSIPNMLELVR- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVL 352
                    +R  +   HYR  ++++   LTEA     +             G       
Sbjct: 289 ------PVELRYYLGSAHYRSVLEYSETALTEAAAGYRRIEDFLGHFDDLELGEWTQGFA 342

Query: 353 SALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEH--- 400
            A+ +D+    A+  +H   R   K            L     A AH+LG +  +     
Sbjct: 343 DAMNDDIAVPKALAEIHTTVRAGNKALAAGDEAEARTLAGQVRAMAHVLGFDPLEWEDGA 402

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                +  +   +   ++ R      K F++AD +R +L + G  + D  +    
Sbjct: 403 QASGADAALDALVHAELERRTQARADKDFATADAVRDRLAAAGITITDTPDGPTW 457


>gi|327329368|gb|EGE71128.1| cysteine--tRNA ligase [Propionibacterium acnes HL103PA1]
          Length = 476

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 158/488 (32%), Positives = 229/488 (46%), Gaps = 60/488 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L        
Sbjct: 4   KLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CSGYQ 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT V N+TDIDDKI+ ++                      +       L C  PT++PRA
Sbjct: 62  VTVVANVTDIDDKILAKSAATGTPWW------AHAYHYENELHAAYKALGCRPPTYEPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE         +
Sbjct: 116 TGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDSDPR 175

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGGG+D
Sbjct: 176 -GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGGGID 234

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE+AQS  A      A  W+HN ++ + G KMSKS GN   + E+        
Sbjct: 235 LRFPHHENELAQSAAA--GRPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV-------T 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------QTST 342
           +++    +R  +L  HYR  I+F+         L EA   + +             +  T
Sbjct: 286 KAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGEQVT 345

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILG 393
           +   +  A ++A+ +DL T  A+ AL     E  K+            L    A   + G
Sbjct: 346 ASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLAVFG 405

Query: 394 IEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++             + L   +   +  ++++R      K +++AD IR  L + G  +E
Sbjct: 406 LDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGLTIE 465

Query: 444 DYKNPDNG 451
           D     + 
Sbjct: 466 DTPAGAHW 473


>gi|162316926|ref|YP_001102717.2| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|187631653|sp|A4F6W7|SYC_SACEN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 464

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 164/479 (34%), Positives = 236/479 (49%), Gaps = 48/479 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +++T  R + EF         +YVCG TV    HIG+ R  + +DVL R L +   
Sbjct: 1   MSLHLHDTATRTMREFHPRLAGVASIYVCGATVQGVPHIGHVRGGLNYDVLRRWLVHNGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  VRN+TDIDDKI+ +A                 + + + F     RL CL P+  
Sbjct: 61  D--VRLVRNVTDIDDKILTKAAD------AGRPWWEWATAHERAFESAFDRLGCLPPSAL 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HI QMI L+Q +I  GHAY A  ++ F  +S   +YG  S +++DE + G     
Sbjct: 113 PRATGHITQMIELMQRLIDKGHAYAAGGDVYFSVASYAEHYGRLSGQRLDEVQQGESTA- 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIHGGGLDL+
Sbjct: 172 -SGKRDPRDFTLWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSEFDIHGGGLDLV 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS  A      A  W+HN ++ + G KMSKS GN + I  +L+        
Sbjct: 231 FPHHENELAQSTAAGDG--FARYWMHNAWVTMSGEKMSKSLGNTVAIPAILQRA------ 282

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVL 352
             AP IR  ++  HYR  I+++   L EA     +                 G +     
Sbjct: 283 -AAPEIRYYLVAPHYRSTIEYSEPALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFA 341

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK 403
           +A+ +DL+T  AI  +H   RES    D                   ILG++   E    
Sbjct: 342 AAMDDDLSTPQAIAVVHNAIRESNAALDRGDDRAANEAAASVRTMTDILGLDPLSEQWAD 401

Query: 404 ----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                      +S  +  ++Q+R      + F++AD +R +L++ G  +ED  +     
Sbjct: 402 TRGADDAAHHALSELVGSMLQQRQQARAERDFATADAVRDRLQACGIAVEDTPDGPLWT 460


>gi|213965076|ref|ZP_03393274.1| cysteinyl-tRNA synthetase [Corynebacterium amycolatum SK46]
 gi|213952190|gb|EEB63574.1| cysteinyl-tRNA synthetase [Corynebacterium amycolatum SK46]
          Length = 471

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 149/479 (31%), Positives = 235/479 (49%), Gaps = 52/479 (10%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T  R++ +F+ +   +  +Y+CG T     HIG+ R  + FD+L R L     +  
Sbjct: 8   QIFDTATRQLKDFEPLREGHASIYLCGATPQAQPHIGHVRSGVAFDILRRWLIAKGYD-- 65

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +VRN+TDIDDKI+ +A +               S+  ++F     +L  L P+ +PRA
Sbjct: 66  VVFVRNVTDIDDKILNKAAEH------GRPWWEWVSRFEREFTWAYNQLGVLPPSVEPRA 119

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGTRVP 180
           T H+ QM+  +Q ++ +G AY  +  + FD  +       +YGS S  ++DE + G    
Sbjct: 120 TGHVTQMVEYMQRLMDNGFAYAVDGSVYFDVDAWSKAEGSDYGSLSGNRVDEMEQGET-- 177

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+   DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG  FDIH GGLDL
Sbjct: 178 NTPGKRGAHDFALWKAAKPGEPSWPTPWGNGRPGWHLECSAMATYYLGSEFDIHCGGLDL 237

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  W+HN ++ + G KMSKS GN +++  +L   +    
Sbjct: 238 QFPHHENEIAQSHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSVPHILTMVR---- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAV 351
                 +R  +   HYR  ++++ + L EA +   +                 G   PA 
Sbjct: 292 ---PVELRYYLGSAHYRSVLEYSEEALQEAAVGYRRIEAFMHRAVDKLGDIEIGEWTPAF 348

Query: 352 LSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEHLN 402
            +AL +DL    A+  +H   R         + TK  ++     A A +LG +   E   
Sbjct: 349 EAALDDDLAVPRALAEIHNAVRGGNQALADGDETKAKEIAGAVRAMAAVLGFDPLNEQWA 408

Query: 403 K----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                       + + +E  ++ER      K +++AD +R +L+  G  + D  +    
Sbjct: 409 TSDSGSDAAMHALGVLVEHQLEERTRARAEKDWATADAVRDRLKEAGIEVTDTADGPAW 467


>gi|228470387|ref|ZP_04055290.1| cysteinyl-tRNA synthetase [Porphyromonas uenonis 60-3]
 gi|228307969|gb|EEK16852.1| cysteinyl-tRNA synthetase [Porphyromonas uenonis 60-3]
          Length = 492

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 158/492 (32%), Positives = 230/492 (46%), Gaps = 45/492 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ IYNTLER    F+ I P ++ +YVCGPTVY   H+G+AR  I FD+L+R L++   
Sbjct: 2   SQLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRN+TD+     +    E                +      ++      L  L 
Sbjct: 62  K--VRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLEPMEVAYYYLNRYHDSLRLLNVLP 119

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKM 175
           P+ +P A+ HI + I L+Q I+  G+AY +   + FD         YG  S R +++   
Sbjct: 120 PSIEPLASGHIIEQIQLVQQILDAGYAYVSEGSVYFDVLKYHADHPYGILSGRNVEDMIS 179

Query: 176 GTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            TR    +  K NP DF LWK++ P     W SPW  G PGWH EC+AM   YLG  FDI
Sbjct: 180 NTRELDGQDEKHNPLDFALWKKAQPSHIMRWPSPWSEGFPGWHCECTAMGRKYLGAHFDI 239

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHE EIAQ+  A + E     W+HN  + ++G+KM+KS GNFIT+ E   
Sbjct: 240 HGGGLDLTFPHHECEIAQA-VASQGEPMVKYWMHNNMITVDGKKMAKSAGNFITLEEFFT 298

Query: 294 TKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
                  +++    IR  +L  HYR  +DF+   L  AE    +          + P   
Sbjct: 299 GNHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQSLKPSAT 358

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNA---- 387
                         A+ +D+NT   I AL   AR     HD         L         
Sbjct: 359 STIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGHEQITSEQLEELRKTYDL 418

Query: 388 -SAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
               ILG++   E  +      +  + A++ L+  R      K + ++D IR +L + GF
Sbjct: 419 YLHDILGMQSATEASDLSGSQQEAFAGAVDLLLDIRSKAKASKDWETSDLIRDKLTALGF 478

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 479 EIQDTKSGAEWK 490


>gi|118466391|ref|YP_879853.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
 gi|254773531|ref|ZP_05215047.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
 gi|166200182|sp|A0QAB5|SYC_MYCA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118167678|gb|ABK68575.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 468

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 150/480 (31%), Positives = 227/480 (47%), Gaps = 46/480 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RPRLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIALG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 64  YD--VAFIRNVTDIDDKILNKAAA------AGRPWWEWAATYERAFSAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QM+ LI+ +I  GHAY  + ++ FD  S P YG  S  +ID+   G  V  
Sbjct: 116 EPRATGHITQMVELIERLIEKGHAYTGDGDVYFDVLSYPEYGQLSGHRIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH EC AM+  YLG  FDIH GG+DL+
Sbjct: 175 -SGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMAHEYLGPEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVL 352
                +R  +   HYR  ++F+   L +A              +    +   G   P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSDTALQDAVKAYVGVEEFLHRVRVRVGAVEPGEPTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN- 402
            AL +DL   +A+  +H+   E  +  D               A   ILG +   E    
Sbjct: 345 DALNDDLAVPAALAEVHQARAEGNRALDSGDHEGALRQARSIRAMMGILGCDPLHERWET 404

Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                     + + +   +Q R    + + ++ AD IR +L+  G  + D  +       
Sbjct: 405 RDESSAALAAVDVLVRAELQNREKAREQRNWALADEIRNRLKQAGIEVTDTADGPQWTLG 464


>gi|300770934|ref|ZP_07080811.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300762207|gb|EFK59026.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 488

 Score =  495 bits (1275), Expect = e-138,   Method: Composition-based stats.
 Identities = 155/491 (31%), Positives = 225/491 (45%), Gaps = 40/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + +YNT+ RK  +F  I PS + MYVCGPTVY   H+GN R  + FD+++R L + 
Sbjct: 1   MENNLVLYNTISRKKEKFNPIHPSMVGMYVCGPTVYSDVHLGNCRTFVSFDLIFRYLLHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      +R   +                I  K T  F         
Sbjct: 61  GYK--VRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLEPMEIVQKYTIGFHDVLRLFNT 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I +I+ II +G+AYE N  + FD        +Y   + RK+++ 
Sbjct: 119 LPPSIEPTATGHISEQIEMIKQIIDNGYAYEVNGTVYFDVEKYVQKYDYTVLTNRKLEDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+   DF LW ++ P     W +PW  G PGWHIECSAMS+ YLG  F
Sbjct: 179 LNNTRELGGQDEKRGRLDFALWIKAKPEHIMRWPAPWSTGFPGWHIECSAMSNKYLGAQF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL   HH NEIAQS   +     A  W+H   L + G +MSKS+GN     EL
Sbjct: 239 DIHGGGMDLAATHHTNEIAQSEACNHTSP-ARYWMHTNMLTVNGARMSKSSGNGFLPQEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                    R +    +R  ML  HYR  +DF+ + L  A+    +          I P+
Sbjct: 298 FTGNHPLLERGYSPMAVRFFMLQAHYRSTLDFSNEALDAADKGFKRLMNAIALLNKITPS 357

Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNAS 388
                           +A+ +D N+   I  L ++ R     +D         L    A 
Sbjct: 358 KATSGFNLEDIRKNCYAAMDDDFNSPILIAELFEVVRIINSIYDGKSTINQKGLDELKAF 417

Query: 389 A-----HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                  ILG+         N+   +  ++  R    + K F+++D IR++L S G  L+
Sbjct: 418 MKDFVEDILGLNDDSNAGTDNMDELMNVIINIRNSAKQNKDFATSDRIREELSSIGIQLK 477

Query: 444 DYKNPDNGQRM 454
           D K+     ++
Sbjct: 478 DSKDGTLWNKI 488


>gi|315224033|ref|ZP_07865874.1| cysteine--tRNA ligase [Capnocytophaga ochracea F0287]
 gi|314946004|gb|EFS98012.1| cysteine--tRNA ligase [Capnocytophaga ochracea F0287]
          Length = 492

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 162/491 (32%), Positives = 238/491 (48%), Gaps = 44/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MEQRLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRTLKFL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD     DD  +   R    S         I  K T  F K       
Sbjct: 61  GYK--VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDE 172
           L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 178

Query: 173 QKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
               TR    +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+ YLG  
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL FPHHE EIAQ             W+H   L + G++MSKS GN+I   +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHGESP-VRYWMHANMLTMNGQRMSKSTGNYILPMQ 297

Query: 291 LLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------- 339
           L+  +  F  + +   VIR   +  HYR  +D + + +  AE   ++  +          
Sbjct: 298 LISGENTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAMKILNELTT 357

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKNHDLL 382
                TS            AL +D N+   I  L +  +              T+ ++L 
Sbjct: 358 DAELPTSLPIAEWKQKCYDALLDDFNSPILIAHLFEAVKWIFQVKNGEEKISVTELNELK 417

Query: 383 PIFNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            + NA    +LG++  ++  N N  +   ++ L+  R+     K +  +D IR +L + G
Sbjct: 418 ELMNAFVFDVLGLQNEQQTANNNDKLDGVLQLLINMRMEARANKDWVLSDKIRDELLALG 477

Query: 440 FILEDYKNPDN 450
             L+D K   +
Sbjct: 478 IQLKDGKEGTS 488


>gi|126437687|ref|YP_001073378.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|187629831|sp|A3Q6W0|SYC_MYCSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126237487|gb|ABO00888.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 481

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 153/477 (32%), Positives = 230/477 (48%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +++Y+T+   + +F  +   ++ +Y+CG TV    HIG+ R  + FDVL R L    
Sbjct: 14  PTGLRLYDTMTGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 74  LD--VAFIRNVTDIDDKILNKAAD------AGRPWWEWAATYERAFSAAYDALGVLPPSA 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QM+ LI+ +I  GHAY  + ++ F+ +++P+YG  S  +ID+   G  V  
Sbjct: 126 EPRATGHITQMVELIERLIDRGHAYTGDGDVYFNVATLPDYGKLSGHRIDDVHQGEGVA- 184

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+
Sbjct: 185 -TGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDLV 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+  A      A  W+HNG++ + G KMSKS GN ++I  +L+  +     
Sbjct: 244 FPHHENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR----- 296

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPAVL 352
             A  +R  +   HYR  ++F+   L +A    +         +    +   G   P   
Sbjct: 297 --AAELRYYLGSAHYRSMLEFSETALQDAVKAYAGVEDFLHRVRTRVGTVVPGDWTPKFA 354

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK 403
           +AL +DL+   A+  +H       +  D               A   ILG +   E    
Sbjct: 355 AALDDDLSVPIALAEVHAARAVGNRALDSGDHETAMTQARSIRAMMGILGCDPLDERWES 414

Query: 404 NIS-----IAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                    AI+ LV      R      K +++AD IR +L+  G  + D  +    
Sbjct: 415 RDETSAALAAIDVLVRWALDSRAEARNRKDWATADQIRDRLKEAGIEVTDTADGPQW 471


>gi|119872615|ref|YP_930622.1| cysteinyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|189082073|sp|A1RTJ7|SYC_PYRIL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119674023|gb|ABL88279.1| cysteinyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 473

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 174/473 (36%), Positives = 244/473 (51%), Gaps = 44/473 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQVEEFTTYVPRLARGYVCGITPYDHMHVGHGRVYVFFDIFRRYLERLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RA++E            I  +   ++ + T +L        PR
Sbjct: 60  -VRLVINFTDIDDKIINRAKEEFGHEAYKRW-REIPERYIAEYFEMTKKLYIKPAYAYPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I  ++  G+AY A +  + F+ + +PNYG  SR+KI+E   G RV  + 
Sbjct: 118 VTENVEDMVKWISTLVEKGYAYVAPDGSVYFEVAKVPNYGVLSRQKIEELVAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  TP EP W+SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWDSPWCPGRPGWHLECVVMSTKHLGAPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L           
Sbjct: 238 HHENEIAIARAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNIITLREVLSKH-------S 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIID-------- 348
              +RLA  M+HYR+P++FT + L +AE           +  Q     G  D        
Sbjct: 291 GEALRLAYAMSHYRKPMEFTYELLQQAEDMAKTLYTAYDELSQALRDAGEKDQEPLAQEA 350

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFN---ASAHI 391
                A   AL +D++T  A+Q L+ +AR          E       L I N     A +
Sbjct: 351 LKYAEAFYGALDDDMSTPEAVQQLYGMARYIISTVLHKIEKISRETALTILNKYVEMADV 410

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ + +  + K +   ++ LV+ R  L + +++  ADYIR++L   G  L D
Sbjct: 411 LGV-LERRQIPKELEEVVKTLVEVRAKLRQERQYQLADYIRQRLAELGVELHD 462


>gi|300859175|ref|YP_003784158.1| cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300686629|gb|ADK29551.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206865|gb|ADL11207.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|302331429|gb|ADL21623.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
 gi|308277117|gb|ADO27016.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 465

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 150/479 (31%), Positives = 233/479 (48%), Gaps = 48/479 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R + +F  +   +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 1   MTLRIFDTGTRSLRDFTPLREGHASIYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               S   ++F     +L  L P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILRKAEEH------GRPWWEWVSTYEREFTWAYDQLGVLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
           PRAT H+ QM+  +Q +I +G+AY+A   + FD S+       +YGS S  K++E + G 
Sbjct: 113 PRATGHVTQMVDYMQRLIDNGYAYDAEGSVYFDVSAWTAATGSDYGSLSGNKVEEMEQGE 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              + + K+   DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIH GG
Sbjct: 173 T--DNHGKRGSHDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATWYLGGEFDIHCGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHENEIAQS  A      A  W+HN ++ + G KMSKS GN +++  +LE  + 
Sbjct: 231 LDLQFPHHENEIAQSHAAGDG--FAQYWMHNHWVTMSGEKMSKSLGNVLSVPNILEKVR- 287

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVL 352
                    +R  +   HYR  ++++   L EA     +        G ++     P   
Sbjct: 288 ------PVELRYYLGSAHYRSMLEYSDNALLEAAAGYRRIEAFLAKVGPVEIGEWTPEFA 341

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN- 402
            AL +DL    A+  +H L R                +     A   +LG++   EH   
Sbjct: 342 KALDDDLAVPKALAEIHGLVRAGNTALSSGDTTEAQRIASSIRAMTSVLGVDPQSEHWAT 401

Query: 403 ---------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                      + I +   ++ R    + K +++AD +R +L + G  + D  +     
Sbjct: 402 ESDTSEDAMAALDILVRAELERRTAAREAKDWATADQVRDRLAAAGITVTDTADGPTWA 460


>gi|313885925|ref|ZP_07819664.1| cysteine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924614|gb|EFR35384.1| cysteine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
          Length = 492

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 159/492 (32%), Positives = 233/492 (47%), Gaps = 45/492 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ IYNTLER    F+ I P ++ +YVCGPTVY   H+G+AR  I FD+L+R L++   
Sbjct: 2   SQLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRN+TD+     +    E                +      ++      L  L 
Sbjct: 62  K--VRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLEPMEVAYYYLTRYHDSLRLLNVLP 119

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKM 175
           P+ +P A+ HI + I L+Q I+  G+AY +   + FD         YG  S R +++   
Sbjct: 120 PSIEPLASGHIIEQIALVQQILDAGYAYVSQGSVYFDVLKYHADHPYGILSGRNVEDMIS 179

Query: 176 GTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            TR    +  K NP DF LWK++ P     W SPW  G PGWH EC+AM   YLG  FDI
Sbjct: 180 NTRELDGQDEKHNPLDFALWKKAQPNHIMRWPSPWSEGFPGWHCECTAMGRKYLGTHFDI 239

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL- 292
           HGGGLDL FPHHE EIAQ+  A + E     W+HN  + ++G+KM+KS GNFIT+ E   
Sbjct: 240 HGGGLDLTFPHHECEIAQA-VASQGEPMVKYWMHNNMITVDGKKMAKSAGNFITLEEFFT 298

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
                  +++    IR  +L  HYR  +DF+   L  AE    +          + P   
Sbjct: 299 GDHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQSLKPSAT 358

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASA- 389
                         A+ +D+NT   I AL   AR     HD         L  +  A   
Sbjct: 359 STIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGYEQITSEQLEELRRAYDL 418

Query: 390 ---HILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
               ILG++   E  +      +  + A++ L++ R      K + ++D IR +L + GF
Sbjct: 419 YLHDILGMQSATETADLSGSQQEAFAGAMDLLLEIRAKAKASKDWETSDLIRDKLTALGF 478

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 479 EIQDTKSGAEWK 490


>gi|94985814|ref|YP_605178.1| cysteinyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|123381854|sp|Q1IXM5|SYC_DEIGD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94556095|gb|ABF46009.1| cysteinyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 497

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 160/498 (32%), Positives = 235/498 (47%), Gaps = 57/498 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I +Y+T++R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R L ++ 
Sbjct: 17  DSGIVLYDTMQRQKVPFVPSVPGRVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRTLLHFG 76

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YV N+TD+    DD      +    +         +  K    FV+D   L  L
Sbjct: 77  YQ--VRYVTNVTDVGHLQDDSDDGEDKIARRAALERLEPMEVADKYFWSFVEDMEALNVL 134

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+  PRAT HIP+ I LI+ +I  GHAY ++  + FD  S P YG  S R++DE + GT
Sbjct: 135 KPSINPRATGHIPEQIALIEELIERGHAYVSDGSVYFDVRSWPEYGKLSGRRLDELEEGT 194

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           R   +  K++P DF LWKR+ P     W SPWG G PGWHIECSAMS  YLG+ FDIHGG
Sbjct: 195 REAVREEKRDPRDFALWKRAEPGHLMRWASPWGEGFPGWHIECSAMSLKYLGEGFDIHGG 254

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHE     +         A  W+HN  + + G KMSKS GNF T+  L     
Sbjct: 255 GLDLEFPHHE--AEIAQAEAAGHPFARYWLHNNMVTVGGEKMSKSKGNFTTLKALFAQH- 311

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIID 348
                    VIR  ++ +HYR   +F+      A     +  +           +    D
Sbjct: 312 ------DPMVIRFLLVSSHYRSITEFSDAAFESARSGYRRLTEALHEIERRLPAAPDQDD 365

Query: 349 PA-----------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------- 389
           PA              A+ +D NT  A+ AL  L  +     +   +   +         
Sbjct: 366 PALLEKIAGHIRTFEDAMRDDFNTPRAVAALFGLTTDVNAALNAGEVGRQALTAARDAYR 425

Query: 390 ----HILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                +LG+       +E  ++ ++  +E ++Q R      K+++ AD +R  L + G  
Sbjct: 426 TLGGGVLGLFAEGRTEREDDSQIVNALMELVLQARQHYRLQKQYAQADELRNTLAAVGVT 485

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           +ED +         RW++
Sbjct: 486 VEDTREGP------RWRR 497


>gi|256820848|ref|YP_003142127.1| cysteinyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
 gi|256582431|gb|ACU93566.1| cysteinyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
          Length = 492

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 163/491 (33%), Positives = 237/491 (48%), Gaps = 44/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MEHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRTLKFL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD     DD  +   R    S         I  K T  F K       
Sbjct: 61  GYK--VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDE 172
           L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 178

Query: 173 QKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
               TR    +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+ YLG  
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL FPHHE EIAQ             W+H   L + G++MSKS GN+I   E
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHGESP-VRYWMHANMLTMNGQRMSKSTGNYILPME 297

Query: 291 LLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------- 339
           L+  +  F  + +   VIR   +  HYR  +D + + +  AE   ++  +          
Sbjct: 298 LISGENTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAIKILNELTT 357

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKNHDLL 382
                TS            AL +D N+   I  L +  +              T+  +L 
Sbjct: 358 DTELPTSLPIAEWKQKCYDALLDDFNSPILIAHLFEAVKWIFQVKNDEERISVTELKELK 417

Query: 383 PIFNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            + NA    +LG++  ++ +N N  +   ++ L+  R+     K +  +D IR +L + G
Sbjct: 418 ELMNAFVFDVLGLQSEQQTVNNNDKLDGVLQLLINMRMEARANKDWVLSDKIRDELLALG 477

Query: 440 FILEDYKNPDN 450
             L+D K   +
Sbjct: 478 IQLKDGKEGTS 488


>gi|302870248|ref|YP_003838885.1| cysteinyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315503473|ref|YP_004082360.1| cysteinyl-tRNA synthetase [Micromonospora sp. L5]
 gi|302573107|gb|ADL49309.1| cysteinyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|315410092|gb|ADU08209.1| cysteinyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 471

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 167/486 (34%), Positives = 240/486 (49%), Gaps = 53/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L     
Sbjct: 1   MTLRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLSKGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT++RN+TDIDDK++ +A      +  +     I   N Q        L  L PT++
Sbjct: 61  E--VTFIRNLTDIDDKVLAKA------MEQDRPFWSIAYANEQILTTSYRALNVLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT H+P+M  LI  +I  GHAY A   + ++ FD +S P YGS S +   + +     
Sbjct: 113 PRATGHVPEMHELIARLIETGHAYPATDGSGDVYFDVASWPAYGSLSGQSPADMQPAGDA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           P++  K++P DF LWK + P EP    W SPWGRGRPGWHIECSAM   YLG  FDIHGG
Sbjct: 173 PDR-GKRDPRDFALWKGAKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGPEFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENEIAQS  AD     A  W+H+G L + G KM KS GN       L+   
Sbjct: 232 GLDLTFPHHENEIAQSQAADL--PFARYWVHHGLLGIGGTKMGKSLGNT------LDLDY 283

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGII 347
                     +R   +  HYR  ID++   L EA +   +                 G +
Sbjct: 284 VAALGVRPVELRYYYVAAHYRSRIDYSEDALREAAVAYRRIEGFVQRAAERVGPGRPGDL 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK 398
               ++A+ +DLNT +A+ ALH++ R+                L    A   ILG++   
Sbjct: 344 PAGFVAAMDDDLNTSAALAALHEVVRDGNTALTAGDDVTVRTTLAATRAMLDILGVDPLD 403

Query: 399 ---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                    + L   +   I   +++R      K +++AD +R QL+  G ++ED     
Sbjct: 404 PAWTGGGRTDDLRGVVDSLIALALEQRAQARSRKDWAAADAVRDQLKQAGVVVEDTP--- 460

Query: 450 NGQRMT 455
            G R T
Sbjct: 461 QGPRWT 466


>gi|332300111|ref|YP_004442032.1| cysteinyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177174|gb|AEE12864.1| cysteinyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
          Length = 492

 Score =  494 bits (1273), Expect = e-137,   Method: Composition-based stats.
 Identities = 159/492 (32%), Positives = 233/492 (47%), Gaps = 45/492 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ IYNTLER    F+ I P ++ +YVCGPTVY   H+G+AR  I FD+L+R L++   
Sbjct: 2   SQLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRN+TD+     +    E                +      ++      L  L 
Sbjct: 62  K--VRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLEPMEVAYYYLTRYHDSLRLLNVLP 119

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKM 175
           P+ +P A+ HI + I L+Q I+  G+AY +   + FD         YG  S R +++   
Sbjct: 120 PSIEPLASGHIIEQIALVQQILDAGYAYVSQGSVYFDVLKYHADHPYGILSGRNVEDMIS 179

Query: 176 GTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            TR    +  K NP DF LWK++ P     W SPW  G PGWH EC+AM   YLG  FDI
Sbjct: 180 NTRELDGQDEKHNPLDFALWKKAQPNHIMRWPSPWSEGFPGWHCECTAMGRKYLGAHFDI 239

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL- 292
           HGGGLDL FPHHE EIAQ+  A + E     W+HN  + ++G+KM+KS GNFIT+ E   
Sbjct: 240 HGGGLDLTFPHHECEIAQA-VASQGEPMVKYWMHNNMITVDGKKMAKSAGNFITLEEFFT 298

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
                  +++    IR  +L  HYR  +DF+   L  AE    +          + P   
Sbjct: 299 GDHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQSLKPSAT 358

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASA- 389
                         A+ +D+NT   I AL   AR     HD         L  +  A   
Sbjct: 359 STIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGHEQITSEQLEELRRAYDL 418

Query: 390 ---HILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
               ILG++   E  +      +  + A++ L++ R      K + ++D IR +L + GF
Sbjct: 419 YLHDILGMQSATETADLSGSQQEAFAGAMDLLLEIRAKAKASKDWETSDLIRDKLTALGF 478

Query: 441 ILEDYKNPDNGQ 452
            ++D K+    +
Sbjct: 479 EIQDTKSGAEWK 490


>gi|18312206|ref|NP_558873.1| cysteinyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|21264010|sp|Q8ZYD8|SYC_PYRAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|18159644|gb|AAL63055.1| cysteinyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 474

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 172/473 (36%), Positives = 240/473 (50%), Gaps = 42/473 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     
Sbjct: 1   MGVRIYNTATRQVEEFVTYVPKLARGYVCGITPYDHVHVGHGRVYVFFDMFRRYLEARGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V  V N TDIDDKII +AR+E            +  +   +F + + +L        
Sbjct: 61  E--VRLVINFTDIDDKIINKAREEFGHDAYKR-WKEVPERYIAEFFEMSNKLFIKPAHAY 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR T ++ +M+  I  ++  G+AY A +  + F+   +PNYG  SR+KI+E   G RV  
Sbjct: 118 PRVTENVNEMVAWISTLVEKGYAYVAPDGSVYFEVGKVPNYGVLSRQKIEELIAGARVEP 177

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  KKNP DF LWK  TP EP W SPW  GRPGWH+EC  MS+ YLG  FD HGGG DLI
Sbjct: 178 EPGKKNPLDFALWKSWTPGEPWWNSPWCPGRPGWHLECVVMSTKYLGAPFDFHGGGADLI 237

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L         
Sbjct: 238 FPHHENEIAIAKAYYGLDNFAKYWIHVGYLTVRGEKMSKSLGNVITLREVLS-------K 290

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDPA---- 350
           +    +RLA  M+HYR+P++F+ + L +AE           +  Q        D      
Sbjct: 291 YSGEALRLAYAMSHYRKPMEFSFELLDQAEEMVKTLYTAYDELSQAVADASDEDKEKLEY 350

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASAHI 391
                   +AL +D +T  A Q L+ LAR                   D+L  +   A I
Sbjct: 351 GKYIESFYAALEDDFSTPQAAQQLYGLARYIISTVLHRIDKASRQTAIDVLTQYVKMADI 410

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ + +  + K +   I+ +V+ R  L + K +  ADY+R++L   G  L D
Sbjct: 411 LGV-LERREIPKEVEEVIKAVVEARARLRREKMYQLADYLRERLAGIGVELHD 462


>gi|157363627|ref|YP_001470394.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|229558795|sp|A8F596|SYC_THELT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157314231|gb|ABV33330.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 463

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 170/472 (36%), Positives = 242/472 (51%), Gaps = 42/472 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL + I EF+  +P  +RMYVCGPTVY   HIGNARPM+VFD L R L Y     
Sbjct: 1   MRFYNTLSKHIEEFKENEPGIVRMYVCGPTVYGLIHIGNARPMVVFDALRRYLEYRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TDIDDKII ++      I  +     I+     ++ +D+  L   AP   P+
Sbjct: 59  RVIMVQNFTDIDDKIINKS------IEFSVDFKDISETFIAEYWRDSMALGVRAPNFSPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++ +P++I  IQN+I   HAY  + ++ F   S P YG  S R IDE K G R+     
Sbjct: 113 TSDFVPEIINAIQNLIAKNHAYVVDGDVYFSVRSFPRYGELSHRSIDELKAGARIDLNEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK + P EP W+SPWG GRPGWHIECS MS+  LG   DIH GG DLIFPH
Sbjct: 173 KRDPLDFALWKSAKPGEPYWKSPWGNGRPGWHIECSVMSTKLLGTTLDIHAGGEDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQS      +     W+HNG +   G KMSKS GN   + E L       + + A
Sbjct: 233 HENEKAQSEALTG-KTFVKYWLHNGMIKYTGDKMSKSTGNIFLLREAL-------KKYGA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSKGIIDPA-- 350
             +++  L  HYR PI+F+ + L+ A    ++  +T                  I+    
Sbjct: 285 DALKIFFLSKHYRSPIEFSEKALSSAAKAATRINETFLRFESEFSFAIPKQDSWINEKRS 344

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKN------HDLLPIF----NASAHILGI-EVCK 398
             + +L +D NT  A+  + +L     +        D L I+         +LG+ ++ +
Sbjct: 345 IFIDSLDDDFNTPRALALIFELVNSLNRAMDDGNERDALKIYHLLRREFCPVLGLFDLPE 404

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
              N++I   ++ L+  R  L   K++  +D IR +L   G  L+D      
Sbjct: 405 RADNRSIEELVKILIDVRAELRAKKQYELSDMIRSKLRKVGIELKDMPQGTT 456


>gi|126641281|ref|YP_001084265.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 447

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 179/467 (38%), Positives = 259/467 (55%), Gaps = 57/467 (12%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD+ HIG+AR M+ FD + R LR    +  V Y+RNITDIDDKII+RA +  
Sbjct: 1   MYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWK--VRYIRNITDIDDKIIKRANEN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 + I  +T++      +D   L CLAP   P+AT +I QM  +I N++  G AY 
Sbjct: 58  -----GETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYP 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKYHKKNPADFILWKRSTPMEPGW 204
           A N ++ F+ +    YG  S RK+++ + G   RV  +  KK+P DF+LWK +   EP W
Sbjct: 113 ASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            SPWG GRPGWHIECSAMS+  LG  FDIHGGG DL+FPHHENEIAQS  +   E+  N 
Sbjct: 173 ASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTG-EQYVNY 231

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+H GF+N++G KMSKS GNF TI +++E        +   VIR  ++ +HYR P++F+ 
Sbjct: 232 WMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFHPEVIRYFIVSSHYRSPVNFSD 284

Query: 325 QRLTEAEILLSKWPQT---------STSKGIIDPAVLS----ALYNDLNTVSAIQALHKL 371
             L EA+  L+++  +          T+   +D + +     A+ +D NT  A+  L +L
Sbjct: 285 VALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNAMCDDFNTAEAMAVLFEL 344

Query: 372 ARESTKNHD---------LLPIFNASAHILGI------EVCKEHLNKNI----SIAIEKL 412
            +E  +            L        +ILG+      +  K  + ++        IE  
Sbjct: 345 NKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKSDIGQDALALSDAEIEDF 404

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +Q+R+   K K F+ AD IR+ L  +G +LED +      + T W++
Sbjct: 405 IQQRVDAKKAKDFAKADSIRQSLLEQGVVLEDTR------QGTVWRR 445


>gi|108801700|ref|YP_641897.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870851|ref|YP_940803.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|123368663|sp|Q1B2P3|SYC_MYCSS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|187629832|sp|A1UMF5|SYC_MYCSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|108772119|gb|ABG10841.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696940|gb|ABL94013.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
          Length = 481

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 153/477 (32%), Positives = 230/477 (48%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +++Y+T+   + +F  +   ++ +Y+CG TV    HIG+ R  + FDVL R L    
Sbjct: 14  PTGLRLYDTMTGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 74  LD--VAFIRNVTDIDDKILNKAAD------AGRPWWEWAATYERAFSAAYDALGVLPPSA 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QM+ LI+ +I  GHAY  + ++ F+ +++P+YG  S  +ID+   G  V  
Sbjct: 126 EPRATGHITQMVELIERLIDRGHAYTGDGDVYFNVATLPDYGKLSGHRIDDVHQGEGVA- 184

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+
Sbjct: 185 -TGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDLV 243

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+  A      A  W+HNG++ + G KMSKS GN ++I  +L+  +     
Sbjct: 244 FPHHENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR----- 296

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPAVL 352
             A  +R  +   HYR  ++F+   L +A    +         +    +   G   P   
Sbjct: 297 --AAELRYYLGSAHYRSMLEFSETALQDAVKAYAGVEDFLHRVRTRVGTVVPGDWTPKFA 354

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK 403
           +AL +DL+   A+  +H       +  D               A   ILG +   E    
Sbjct: 355 AALDDDLSVPIALAEVHAARAVGNRALDSGDHETAMTQARSIRAMMGILGCDPLDERWES 414

Query: 404 NIS-----IAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                    AI+ LV      R      K +++AD IR +L+  G  + D  +    
Sbjct: 415 RDETSAALAAIDVLVRWALDSRADARNRKDWATADQIRDRLKEAGIEVTDTADGPQW 471


>gi|77463274|ref|YP_352778.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|109894933|sp|Q3J2V7|SYC_RHOS4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|77387692|gb|ABA78877.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 499

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 197/492 (40%), Positives = 269/492 (54%), Gaps = 51/492 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I++ NT  R+   F+ ID  N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YG
Sbjct: 2   TEIRLTNTKSRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           E  VTYVRN TD+DDKI   A   +       +   I   T +  + + +D   L  L P
Sbjct: 62  EGHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           TH+PRAT  I  MI +I+++I  GHAYE    ++F   S  +YG+ S R +D+   G RV
Sbjct: 122 THEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAMS   LG  FDIH GG+D
Sbjct: 182 EVAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGATFDIHAGGID 241

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQSCCA      A +W+HN  L ++GRKMSKS GNF T+ +LL+      
Sbjct: 242 LQFPHHENEIAQSCCAHPEGGFARVWMHNEMLLVDGRKMSKSLGNFFTVRDLLD------ 295

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--TSTSKGIIDPAVLSALYN 357
           + WP  VIR+  L THY  P+D+T ++  +A+  L  W +     + G +   V+  L +
Sbjct: 296 QGWPGEVIRMVYLGTHYGRPMDWTAEKAEQAKTTLRNWAEMVEGAAPGEVRAEVVDPLSD 355

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-------------CKEHLNKN 404
           DLNT  A+ AL  L     K  D   +   SAH+LG+++              +E   + 
Sbjct: 356 DLNTAGALAALSDLY----KRKDAAGLLG-SAHLLGVDLQAIRHQPWARPYAFEELDGRF 410

Query: 405 ISIAIE----------------------KLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +   I+                       L+   L L +   F +AD ++      G  L
Sbjct: 411 LREGIDYQPTVGVIGWGEITDQARETSIGLLHRWLALRRAGDFETADRLKTDAMRLGVEL 470

Query: 443 EDYKNPDNGQRM 454
              K+P+     
Sbjct: 471 RAQKSPNGVTGG 482


>gi|170017958|ref|YP_001728877.1| cysteinyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|226735061|sp|B1MW68|SYC_LEUCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169804815|gb|ACA83433.1| cysteinyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 469

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 169/482 (35%), Positives = 236/482 (48%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F AI P  + MYVCGPTVY++ HIGNAR  I FDV+ R L Y     
Sbjct: 2   IHVYNTLSREKEAFHAITPGKVNMYVCGPTVYNYIHIGNARSAIAFDVIRRYLEYSGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII+RAR+E            I  K  Q F +DT  L     T + R
Sbjct: 60  VVNYVSNFTDVDDKIIQRAREEGVDEM------TIADKYAQAFDEDTIPLNIKPATTRSR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT  IP +I  ++++I  G+AYE+  ++ F       YG  + + + E +          
Sbjct: 114 ATAVIPDIIAFVEDLIHKGYAYESAGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLDDQ 173

Query: 181 EKYHKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E   K++P DF +WK S +  E  W SPWG+GRPGWHIECS M+  YL    DIHGGG+D
Sbjct: 174 ELTRKEDPIDFAVWKASHSSDEISWVSPWGKGRPGWHIECSVMAQKYLADTIDIHGGGID 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH NEIAQS      +   N W+HNGF+N+   KMSKS GNF T++++L       
Sbjct: 234 LAFPHHTNEIAQSEARTG-QTFVNYWLHNGFVNVNDEKMSKSLGNFTTVHDMLAHYD--- 289

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------KGII 347
                 VIR  +  T YR PI++    L +A   L +      +               +
Sbjct: 290 ---DPMVIRYLLATTQYRRPINYAPDTLEQARAELERIRTAYRNVFFRISTAKTGHDDSV 346

Query: 348 DPA-------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
           D A          A+ +D NT +AI ++ +L   +                L        
Sbjct: 347 DYAIAEHISHFREAMDDDFNTQNAIASIFELVTIANNYASRDEIKLDTATRLTHAIADLM 406

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           ++ G+    EHL   +S   + L+ +R+    ++ F+ +D +R QL   G I+ED     
Sbjct: 407 NVFGVNGLSEHLT--LSAEAQALLDKRVQARAVRDFNLSDQLRDQLSDMGIIVEDTTQGQ 464

Query: 450 NG 451
             
Sbjct: 465 RW 466


>gi|297627017|ref|YP_003688780.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
 gi|296922782|emb|CBL57360.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)
           [Propionibacterium freudenreichii subsp. shermanii
           CIRM-BIA1]
          Length = 467

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 169/488 (34%), Positives = 238/488 (48%), Gaps = 57/488 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
               +Y+    ++  F  + P  + +Y CG TV    H+G+ R  +VFDVL R       
Sbjct: 1   MSFHLYDESSGQVVPFVPLIPGKVSIYHCGLTVQSSPHLGHMRKEVVFDVLRRWFDASGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V NITDI++KI ++A +             +      +  +    L C+ P+++
Sbjct: 61  --RVRVVANITDINEKIWQKAAEAGLEWF------ELAYAVELELHRAYASLGCIPPSYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HI +MI LI  +I  GHAY A+    ++ FD  S P YG  S +KID+    T  
Sbjct: 113 PRATGHITEMIELINRLIERGHAYAADDGSGDVYFDVRSWPEYGELSHQKIDDMVAATDA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K +P DF LWK S P EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGG
Sbjct: 173 DPR-GKHDPRDFALWKGSKPDEPATASWPSPWGRGRPGWHLECSAMSLKYLGEAFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHHENE AQS  A      A+ W+HN F+ + G KMSKS GN  T+ E+     
Sbjct: 232 GIDLRFPHHENEQAQSRAA--GYDFAHYWMHNAFVTMAGEKMSKSLGNGATVAEV----- 284

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI 346
              + +PA  +RL +   HYR  I+++   LTEA   L +            Q +     
Sbjct: 285 --TKHYPARAVRLYLAQPHYRSTIEYSDTSLTEATAQLDRIDSFLNRAHVSGQAAFDTAD 342

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVC 397
           +  A + A+ NDL T +A   L+   +E  +  D          +    A  H+LG++  
Sbjct: 343 LPDAFVEAMDNDLGTPAAFAVLYDTIKEGNRAFDANDQGAATNCVAQVRAMLHVLGLDPH 402

Query: 398 KEHLNKNI--------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           +                  ++ ++ ER    + K F++AD+IR  L   G  LED     
Sbjct: 403 EPQWADQAGGTDLAVTDGLVKLVLDERQAARERKDFAAADHIRDSLTELGIRLED----- 457

Query: 450 NGQRMTRW 457
            G   TRW
Sbjct: 458 -GANGTRW 464


>gi|254437047|ref|ZP_05050541.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252493|gb|EDY76807.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 481

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 202/471 (42%), Positives = 269/471 (57%), Gaps = 33/471 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YNT  RK  EF  ID  ++RMYVCGPTVYD AH+GNARP+IVFD L+RLLR+ YG  
Sbjct: 3   IKLYNTKVRKKVEFSPIDHKDVRMYVCGPTVYDRAHLGNARPVIVFDTLFRLLRHTYGAD 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK---NTQQFVKDTTRLACLAPTH 121
            VTYVRN TD+DDKI   A     +        +I  +       +++D   +  L P+ 
Sbjct: 63  HVTYVRNFTDVDDKINATAFARQQAGAAGTLEDLIAERSSETIGWYLEDMAAVGALEPSA 122

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT +I QMI +I+++I  GHAYEA    +F   S   YG+ S R +D+   G RV  
Sbjct: 123 MPRATQYIAQMITMIEDLIAKGHAYEAEGHALFRVRSYTEYGALSGRSVDDMIAGARVEV 182

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K++P DF+LWK S+ ++PGW+SPWGRGRPGWHIECSAM+   LG  FDIHGGG DL 
Sbjct: 183 APYKEDPMDFVLWKPSSDVQPGWDSPWGRGRPGWHIECSAMALDLLGGEFDIHGGGNDLQ 242

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA      AN+W+HN  L +EGRKMSKS GNF T+ +LLE      + 
Sbjct: 243 FPHHENEIAQSTCAGHG--FANVWMHNEMLQVEGRKMSKSLGNFFTVRDLLE------QG 294

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------TSTSKGIIDPAVLSA 354
            P  VIR  ML THYR+P+D+T  ++  AE  L  W         T+      D  +L+A
Sbjct: 295 VPGEVIRFVMLSTHYRKPMDWTAAKVQFAEKTLIGWRTATMELTPTAAPDFTADKEILAA 354

Query: 355 LYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCK--EHLNKNI 405
           L +DLNT   I  L+ L  +     D       L   F A+  + G+   +  +  N ++
Sbjct: 355 LSDDLNTHLMISKLNALRPKPQMLLDNARFVGFLSDEFRAAREVHGLPSGQYSDFDNIDL 414

Query: 406 SIAI------EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +  I      +K+ + R   L+ K FS+ D I+ +    G  +   K    
Sbjct: 415 NAPIHLHLLNDKITEIRATALQTKNFSALDEIKNKAAEAGIEVRMSKVGVE 465


>gi|296126677|ref|YP_003633929.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018493|gb|ADG71730.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 472

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 167/492 (33%), Positives = 261/492 (53%), Gaps = 55/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K+I +YN+L R+   F+ I    + MY CGPTVY++AHIGN R  +  D+L R+L  Y  
Sbjct: 2   KEIVLYNSLTREKEVFKPIKEGEVGMYSCGPTVYNYAHIGNFRAYVFSDLLRRVLEDYGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N+TD+DDK I+ +++ H       +++  T K  + F +D   L     +  
Sbjct: 62  N--VKLVMNLTDVDDKTIKNSKENH------ISLNEYTKKYKEAFFEDIKTLGIKKASVN 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR---RKIDEQKMGTRV 179
           P AT+HI +MI +I+ +  +GH YEA+  + F  S+ P YG  +    +++ E   G  +
Sbjct: 114 PAATDHIKEMIDIIELLKKNGHTYEADGSVYFKISTFPQYGELANLDKQELLEGASGRVL 173

Query: 180 PEKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            ++Y K+N +DF+LWK  T    +  W+SP+G+GRPGWHIECSAMS  YLGK FDIH GG
Sbjct: 174 NDEYDKENASDFVLWKAYTEEDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTGG 233

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D  FPHHENEIAQ+  A   EK  N W+H   L ++G KMSKS GNF T+ +LL+    
Sbjct: 234 VDNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLD---- 288

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------P 338
             +      IR +++ +HYR+ ++FT++ + +++  + +                     
Sbjct: 289 --KGLSKEAIRYSLINSHYRKQLNFTIEGIKQSQSAIDRVNDFVFRLKDINKTDTNEIND 346

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASA 389
           + S      +     ++YNDLN   A+  L  L + +  + D         ++       
Sbjct: 347 KLSKEIDEANDKFSDSVYNDLNISEALGVLFTLIKNANTSFDSINNETRDKMIKFIERVN 406

Query: 390 HILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           +I+   ++  E  NK+    I KL++ER +  K K +  AD IR +L S G  + D    
Sbjct: 407 NIINCFKINDEEENKDDEEEINKLIEERSLAKKEKNYQKADEIRNKLLSMGIEIMDT--- 463

Query: 449 DNGQRMTRWKQK 460
               +  +WK+K
Sbjct: 464 ---PQGVKWKRK 472


>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
 gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
          Length = 530

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 183/524 (34%), Positives = 262/524 (50%), Gaps = 90/524 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K + K+YNT+ R++  F+   P  + MYVCG T Y F+HIG+AR  ++FDVL+R L++  
Sbjct: 4   KVEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHLG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VTY RN TDIDDKII+RA +        +    ++S+  ++++ D   L CL PTH
Sbjct: 64  YE--VTYARNFTDIDDKIIKRANES------GEDPFSLSSRFCEEYLVDMDSLQCLRPTH 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR T+HI Q+  +I  II +G AY +  ++ F     PNYG  S +K++  + G R P+
Sbjct: 116 QPRVTDHIEQIKDMITQIINNGFAYPSEGDVFFAVDKFPNYGQLSGQKLENHRAGERNPD 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+ YL   FDIHGGG DLI
Sbjct: 176 TR-KRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSDLI 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEI QS  A   E   + WIHNG +     KMSKS GN+ TI E+ E        
Sbjct: 235 FPHHENEITQSAAA-CQESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTER------- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQTSTSKGI- 346
           +    +R  ++  HYR P+++T               Q L + E  LS +   S  +G  
Sbjct: 287 YHPLAVRHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAA 346

Query: 347 ------------------IDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNHDLLP---- 383
                             +     + + +DL+T   +  A     +    +  +L     
Sbjct: 347 QNSKVVGITADAKKCINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQ 406

Query: 384 ----------------IFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQ 414
                                 +ILG+       E+ ++  +K +         + + ++
Sbjct: 407 KPQQLSLIQSLTEIEREIKLVLNILGLLPPGTYAEILQQLKDKALKRAGVTEDDVLRSIE 466

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           ER    K K+FS +D +R  L +KG  L D        + T W+
Sbjct: 467 ERAQARKNKEFSRSDQVRANLAAKGIALMDV------GKETVWR 504


>gi|320535476|ref|ZP_08035582.1| cysteinyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320147668|gb|EFW39178.1| cysteinyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 486

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 167/500 (33%), Positives = 248/500 (49%), Gaps = 58/500 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL +KI EF+ +    +  Y CGPTVY++AHIGN R  +  D+L R L +   
Sbjct: 1   MSLRVYNTLGKKIEEFKPLSGMKVGFYGCGPTVYNYAHIGNLRAYVFQDILTRTLSFLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
           +  VT+V NITD+     +    E   +        ++  I    T+ F  DT RL  L 
Sbjct: 61  D--VTHVMNITDVGHLSGDNDEGEDKMVKSAKERGKSVMQIADYYTKAFFTDTERLNILK 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PT   +AT+HIP+MI LI+ +   GH Y +   + +D S+ P+YG  +   +DE K G R
Sbjct: 119 PTIVCKATDHIPEMIALIKRLEERGHTYFSEGNLYYDISTFPDYGKMAGFTLDELKAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V    +KKNP DF+LW   +  E     W+SPWG+G PGWHIECSAMS  YLG+ F+IH 
Sbjct: 179 VAIDKNKKNPHDFVLWFTQSKFENQALVWDSPWGKGYPGWHIECSAMSMKYLGEQFEIHS 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQS  A   +     W+HN FL +   KMSKS+G FIT+  +++  
Sbjct: 239 GGIDHIRIHHTNEIAQSEGATG-KPWVKYWMHNEFLVMNKGKMSKSSGEFITLQAVID-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------- 339
               + +     R  +L  HYR  + F+ + +  A+       Q                
Sbjct: 296 ----KGFDPIDYRFLLLGGHYRSQLTFSWEAMETAKNARKSLQQRIENLKSGIENLSLIE 351

Query: 340 ----TSTSKGIID--------PAVLSALYNDLNTVSAIQALHKLARESTK-NHDLLPIFN 386
                S ++ ++          + + AL +DL+T  AI  + +L ++ T    D L   +
Sbjct: 352 EKISASDAEKLLRNSPALPYFESFVQALEDDLSTPRAISEMQQLIKDKTIYAEDRLKTLS 411

Query: 387 ASAHILGIEVCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
               I G+ + ++         +     +I  L+QER      K +  AD IR +L +KG
Sbjct: 412 IFDQIFGLNLFEKSKSNSNKQESAMDEQSILTLIQERTDAKNAKNYQRADEIRDELRTKG 471

Query: 440 FILEDYKNPDNGQRMTRWKQ 459
            ILED        + T WK+
Sbjct: 472 IILEDT------PKGTVWKR 485


>gi|320334065|ref|YP_004170776.1| cysteinyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
 gi|319755354|gb|ADV67111.1| cysteinyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
          Length = 485

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 166/497 (33%), Positives = 238/497 (47%), Gaps = 57/497 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +++TL R+  +F+   P  + MY+CGPTVY  AH+G+A+  + FDV+ R   +   
Sbjct: 6   PDIYLHDTLTRQKVKFEPTTPGRVGMYLCGPTVYSDAHVGHAKKEVAFDVVRRYFLHRGY 65

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V YV NITD+    +D      +    +         +  K    FV D  RL  L 
Sbjct: 66  --AVRYVSNITDVGHLQNDSDDGEDKIAKRAALEQLEPMEVADKYFWSFVSDMERLNVLK 123

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P+  PRAT HI + I LI+ +I  GHAY AN  + FD  S P YG  S RK+D+Q+ GTR
Sbjct: 124 PSINPRATGHITEQIELIEELIARGHAYAANGSVYFDVRSWPRYGVLSGRKLDDQEEGTR 183

Query: 179 VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +  K++P DF LWKR+       W+SPWG G PGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 184 EDVREEKRDPRDFALWKRAEAGHIMRWDSPWGVGFPGWHIECSAMSLKYLGEGFDIHGGG 243

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           LDL FPHHE EIAQS  A      A  W+HN  L + G KMSKS GNF T+ +L      
Sbjct: 244 LDLQFPHHEAEIAQSEAA--GHAFARYWMHNNMLTIGGEKMSKSKGNFTTLADLYGRV-- 299

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIID 348
                   V+R  ++ +HYR   +        A     +  +            + G   
Sbjct: 300 -----DPMVVRFLLISSHYRSITEMNDDAFVSAANGYRRLNEALHEVERRLPDAADGEDA 354

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA--------- 389
                      A  +A+ +D NT  A+ AL  L  +     +   + NA+          
Sbjct: 355 ALSRKIAGHVAAFEAAMSDDFNTPKAVAALFGLTTDVNAALNAGAVPNATLVAARDAYRQ 414

Query: 390 ---HILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               +LG+    +  ++   + +S  ++ +++ R      K++  AD +R  L   G  +
Sbjct: 415 LGGDVLGLFADTQDARQDDTQLVSALMDLVLKARQNYRLNKQYGEADELRDTLTKVGVTV 474

Query: 443 EDYKNPDNGQRMTRWKQ 459
           ED K+        RW++
Sbjct: 475 EDTKDGP------RWRR 485


>gi|283458741|ref|YP_003363379.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283134794|dbj|BAI65559.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 472

 Score =  493 bits (1271), Expect = e-137,   Method: Composition-based stats.
 Identities = 162/484 (33%), Positives = 240/484 (49%), Gaps = 44/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y++    I EF+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY   
Sbjct: 1   MTMRFYDSASATIREFEPVVPGEARIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPS----IPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  VT VRN+TDIDDKI+ ++ +           N+    +  +  + F +    L    
Sbjct: 61  K--VTTVRNVTDIDDKILAKSAESMEPGFEGEFPNEQWWALAYRFEKVFAQAYAALGIDP 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ + + +++ + 
Sbjct: 119 PTYEPRATGHIPEMFALIQRLIDRGHAYPALDDSGDVYFDVRSWDKYGALTNQSVEDMQD 178

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK     EP    WESPWGRGRPGWH+ECSAM+  YLG  FD
Sbjct: 179 SADADPR-GKRDPRDFALWKGYKEGEPLTASWESPWGRGRPGWHLECSAMAGKYLGSRFD 237

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAA--GDDFANFWMHNGMVTYEGEKMSKSIGNTISPAQML 295

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------ 346
           +  +         V+R  +   HYR  +D+    L EA   + +      +         
Sbjct: 296 QMAR-------PLVVRYYLGSAHYRSILDYRPSSLQEAATAIERVEAFLAAAQDVLKPGR 348

Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGI---- 394
            +  A   A+ +D+N   A+  LH+  R             +      A A +LG+    
Sbjct: 349 EVPEAFAEAMDDDVNIPRALAVLHEQTRAGNAALAAGEDASEAANAVMAMAEVLGLAQLM 408

Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
               E      ++ +   I+ ++ ER      K ++ AD +R  L S G  ++D  N  +
Sbjct: 409 SFNAEGTSGAEHEALDALIQAVLAERADARAQKDWAKADAMRDLLASAGVQVKDGANGSS 468

Query: 451 GQRM 454
               
Sbjct: 469 WSVG 472


>gi|313835565|gb|EFS73279.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
          Length = 476

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 157/491 (31%), Positives = 229/491 (46%), Gaps = 60/491 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YNT    I  F+      + +Y CG TV    H+G+ R  +VFDVL R L     
Sbjct: 1   MTLKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLE--CS 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT V N+TDIDDKI+ ++                      +       L C  PT++
Sbjct: 59  GYQVTVVANVTDIDDKILAKSAATGTPWW------AHAYHYENELHAAYKALGCRPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+MI L++ +I  GHAY A   + ++ FD  + P YG  S  ++DE       
Sbjct: 113 PRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDS 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P  F LWK     EP    W SPWGRGRPGWH+ECSAMS  YLG+ FDIHGG
Sbjct: 173 DPR-GKRDPRGFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHHENE+AQS  A      A  W+HN ++ + G KMSKS GN   + E+     
Sbjct: 232 GIDLRFPHHENELAQSAAA--GRPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEV----- 284

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWP-----------Q 339
              +++    +R  +L  HYR  I+F+         L EA   + +             +
Sbjct: 285 --TKAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGE 342

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
             T+   +  A ++A+ +DL T  A+ AL     E  K+            L    A   
Sbjct: 343 QVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLA 402

Query: 391 ILGIEVC----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           + G++             + L   +   +  ++++R      K +++AD IR  L + G 
Sbjct: 403 VFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGL 462

Query: 441 ILEDYKNPDNG 451
            +ED     + 
Sbjct: 463 TIEDTPAGAHW 473


>gi|255534556|ref|YP_003094927.1| cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
 gi|255340752|gb|ACU06865.1| Cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
          Length = 488

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 165/487 (33%), Positives = 235/487 (48%), Gaps = 42/487 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYN+L      F  I  +N+ MYVCGPTVY   H+GN R  + FD +YR L +   
Sbjct: 1   MSLKIYNSLSGDKEIFTPIHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRALTHLGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRNITD     DD  ++  R    S         I  K T  F K       L 
Sbjct: 61  K--VRYVRNITDAGHLTDDGDVDNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLDVFNLLP 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQK 174
           PT +P AT HI + I L Q ++  G AYE+N  + FD         NYG  SRR I+E  
Sbjct: 119 PTIEPTATGHIVEQIELTQKLVDKGFAYESNGSVYFDVQEYNSRGLNYGELSRRNIEELF 178

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  KKNP DF LWK ++P     W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 179 ANTRDLDGQNEKKNPQDFALWKAASPAHIMRWNSPWGEGFPGWHLECTAMSTKYLGEKFD 238

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE E+AQ    +  E   N W+H   L + G++MSKS GN+I   EL+
Sbjct: 239 IHGGGMDLKFPHHECEVAQGKACNGTEP-VNYWLHANMLTMNGQRMSKSTGNYILPMELV 297

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
             +  F  +++   V+R   L  HYR  +D + + +  +E    +               
Sbjct: 298 SGSNSFFEKAFHPAVVRFNFLQAHYRSVLDISNEAMLASEKGFQRLMDAMKILSDVQLKT 357

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPI 384
               +            AL +D N+   I  L +      +  D            L  +
Sbjct: 358 ASNSTFDVEAWKKKCYDALTDDFNSPILISHLFEAVNFIFRLKDGKETVTSTDLENLKQL 417

Query: 385 FNAS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            N     +LG++  +E+ ++ +  A++ L++ R    K K F  +D IR +L ++G  L+
Sbjct: 418 LNDFVFDVLGLQNVEENNHQKLDQALQVLIELRNQARKAKNFDLSDQIRDRLLAEGIELK 477

Query: 444 DYKNPDN 450
           D ++   
Sbjct: 478 DGRDGTT 484


>gi|293606585|ref|ZP_06688941.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
 gi|292814970|gb|EFF74095.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
          Length = 484

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 172/496 (34%), Positives = 247/496 (49%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+      +RMYVCG TVYDF H+G+AR ++ FDV+ R LR      
Sbjct: 2   LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGL-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA +    I        +T         D   L   +P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRAVETSRRIG------DVTDFYIAAMHADEQALGVESPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +  +G AY+A+  ++ +     P YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGKLEQNGLAYQADDGDVNYAVRGFPGYGKLSGKTLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 SKRDPLDFVLWKSAKADEPADTKWESPYGMGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE-------LLE 293
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI +         +
Sbjct: 234 KFPHHENEIAQTEGAFGG-TLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTVALGEPAAD 292

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
              +      A ++R  ++  HYR   ++T   L +A+  L +  Q   +    D     
Sbjct: 293 DANYRVNPREAEMVRFFIVRNHYRSSQNYTPDNLVDAQNALDRLYQALQNVPADDQGIDW 352

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------ 395
                 A  +A+ +D N+  A+ AL +LA E+ ++          A A +LG+       
Sbjct: 353 NEPQAQAFKAAMDDDFNSSGAVAALFELASEANRSKSARAAGQLRALAAVLGLLQQDPAA 412

Query: 396 ------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                       + +       + AI+ L+  R      + F+ AD IR +L   G  L+
Sbjct: 413 YFQSPTRYSAAAIEQGQRATLDAAAIQTLIDARAAAKAARDFAEADRIRAELRDAGIELD 472

Query: 444 DYKNPDNGQRMTRWKQ 459
           D         +T+W++
Sbjct: 473 DKPGG-----LTQWRR 483


>gi|221639139|ref|YP_002525401.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254781691|sp|B9KRV8|SYC_RHOSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|221159920|gb|ACM00900.1| Cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 519

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 194/513 (37%), Positives = 272/513 (53%), Gaps = 60/513 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I++ NT  R+   F+ ID  N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YG
Sbjct: 2   TEIRLTNTKSRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYG 61

Query: 63  EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           E  VTYVRN TD+DDKI   A   +       +   I   T +  + + +D   L  L P
Sbjct: 62  EGHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRP 121

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T +PRAT  I  MI +I+++I  GHAYE    ++F   S  +YG+ S R +D+   G RV
Sbjct: 122 TQEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARV 181

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-------VFD 232
                K++P DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K        FD
Sbjct: 182 EVAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMADGLLMKDLPENERSFD 241

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHHENEIAQS CA    + A +W+HN  L ++G+KMSKS GNF T+ EL+
Sbjct: 242 IHAGGIDLQFPHHENEIAQSRCAHPEGEFAKVWMHNEMLLVDGKKMSKSLGNFFTVRELI 301

Query: 293 ET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQ 339
           E  +K    +   P IRL  L  HYR PID     + +A + L  W              
Sbjct: 302 EEYRKQFAVNNIGPAIRLRFLQGHYRAPIDAARHYIEQASVKLGLWWHFISEHLDAPITD 361

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE----------STKNHDLLPIFNASA 389
                 +    V+ AL +DLNT  A+  +  L                  D L +    A
Sbjct: 362 KDRRDILATSPVIEALADDLNTPLAVTYIDGLVSRLRGGIQKQGYVDAEMDDLEMVAKRA 421

Query: 390 HI----LG--IEVCKEH---------------LNKNISIAIEKLVQERLILLKMKKFSSA 428
            +    LG   +  +EH                + ++ + I +L++ER    K + F+ +
Sbjct: 422 RVAIEFLGFTFDDLEEHHGPVQLKRLKERQLSASADVGVRIGRLLEERAEARKARDFARS 481

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           D IR +L++ G +++D ++         W+ +P
Sbjct: 482 DAIRDRLQAAGVLIKDSRD------GATWELEP 508


>gi|313206920|ref|YP_004046097.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|312446236|gb|ADQ82591.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
 gi|315023996|gb|EFT36998.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
 gi|325335643|gb|ADZ11917.1| Cysteinyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
          Length = 486

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 167/484 (34%), Positives = 234/484 (48%), Gaps = 41/484 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  +   F+ I   N+ MYVCGPTVY   H+GN R  + FD +YR L Y   + 
Sbjct: 2   LKIYNSLTGEKEVFKPILDRNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRTLTYLGYK- 60

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V YVRNITD     DD  +   R    S         I  K T  F K       L PT
Sbjct: 61  -VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLELFNLLPPT 119

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQKMG 176
            +P A  HI + I L Q +I  G AYE+N  + FD  +      NYG  S+R I+E    
Sbjct: 120 IEPTAIGHIMEQIELTQKLIDKGFAYESNGSVYFDVKAYNEKGLNYGELSKRNIEELFAN 179

Query: 177 TRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           TR    +  KKNP DF LWK+++P     W SPWG G PGWH+EC+AMS+ YLG+ FDIH
Sbjct: 180 TRDLDGQGEKKNPQDFALWKKASPAHIMRWNSPWGEGFPGWHLECTAMSTKYLGEKFDIH 239

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-E 293
           GGG+DL FPHHE EIAQ    +      N W+H   L + G++MSKS GN+I   +L+  
Sbjct: 240 GGGMDLKFPHHECEIAQGKACNGTSP-VNYWMHANMLTMNGQRMSKSTGNYILPMQLISG 298

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---- 349
              F  + +   V+R   +  HYR  +D + + +  +E    +  +      ++      
Sbjct: 299 ENDFFEKPFHPSVVRFCFMQAHYRSVLDISNEAMIASEKGFQRLMEAMNVLELLSANGNN 358

Query: 350 ----------AVLSALYNDLNTVSAIQALHKLA---------RESTKNHDLL----PIFN 386
                        +AL +D N    I  L +           +ES    DL+     +  
Sbjct: 359 TTFNIEDWKSKCHTALLDDFNAPILIAHLFEAVKFIFALKDGKESISETDLILLKETLNR 418

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               +LG++  +E+ N+ +  A++ L+  R    K K +  +D IR QL  KG  L+D K
Sbjct: 419 LVFDVLGLQKIEENNNEKLDQALQILINLRNEARKAKNWELSDQIRDQLLEKGIELKDGK 478

Query: 447 NPDN 450
               
Sbjct: 479 EGTT 482


>gi|171184546|ref|YP_001793465.1| cysteinyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558796|sp|B1YA45|SYC_THENV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|170933758|gb|ACB39019.1| cysteinyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 474

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 172/473 (36%), Positives = 244/473 (51%), Gaps = 44/473 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQVEEFTTYVPRLARGYVCGITPYDHMHVGHGRVYVFFDIFRRYLERLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKI+ +AR+E            +  +   ++ + T RL        P+
Sbjct: 60  -VRLVINFTDIDDKIVNKAREEFGHEAYKRW-REVPERYIAEYFEMTRRLYIKPAYAYPK 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I  ++  G+AY A +  + F+ + +PNYG  SR+KI+E   G RV  + 
Sbjct: 118 VTENVEDMVKWISTLVEKGYAYVAPDGSVYFEVAKVPNYGVLSRQKIEELIAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  TP EP W SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWNSPWCPGRPGWHLECVVMSTKHLGAPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L           
Sbjct: 238 HHENEIAIARAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNIITLREVLSKH-------S 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIIDP------- 349
              +RLA  M+HYR+P++FT + L +AE           +  Q     G  D        
Sbjct: 291 GEALRLAYAMSHYRKPMEFTYELLQQAEDMAKTLYTAYDELSQALRDAGEKDQEPIAQEA 350

Query: 350 -----AVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFN---ASAHI 391
                A   AL +D++T  A+Q L+ +AR          E       L + N     A +
Sbjct: 351 LKYAGAFYGALDDDMSTPEAVQQLYGMARYIISTVLHRVEKISRETALAVLNKYVEMADV 410

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LG+ + +  + K +  A++ LV+ R  L + +++  ADYIR++L   G  L D
Sbjct: 411 LGV-LERRQIPKELEEAVKALVETRARLRQERQYQLADYIRQRLAELGVELHD 462


>gi|121611834|ref|YP_999641.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|187631646|sp|A1WSL6|SYC_VEREI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|121556474|gb|ABM60623.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 460

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 174/479 (36%), Positives = 239/479 (49%), Gaps = 45/479 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + EF  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R L+    
Sbjct: 1   MSLRIYNTLSRALEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKARGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +     I  +T +       D   L    PT +
Sbjct: 61  K--VTYVRNITDIDDKIIGRA------LERGITIGALTDEMIAAMHADIGALGLEPPTLE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++P+M+ LI  +   G AY A N ++ +       YG  S +  DE + G RV  
Sbjct: 113 PRATQYVPRMLALIGQLQAKGLAYRASNGDVNYAVRKFQGYGKLSGKSPDELRAGARVAL 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P DF+LWK + P EP    W+S +GRGRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 173 ADGKTDPLDFVLWKSAKPHEPPEAQWDSDYGRGRPGWHIECSAMSCATLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS      +  A  W+HNGF+ ++  KMSKS GNF TI ++L      
Sbjct: 233 DLQFPHHENEIAQSEGVTG-KPLARFWLHNGFVRVDNEKMSKSLGNFFTIRDVLA----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIID----- 348
              + A  +R  ++  HYR  ++++   L +A   L +               ID     
Sbjct: 287 --QYDAQTVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVPPAPVAAIDWTEPH 344

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE--------VCKE 399
                +A+  D  T  A+  L  LA E  K+H         A    +           + 
Sbjct: 345 AARFQAAMDEDFGTPEAVAVLFDLAVEVNKSHSPQRAGLLKALGGCLGLLQGDPRAFLQA 404

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                    I+  +  R      + F+ AD IR  L ++G +L+D      G   T W+
Sbjct: 405 GAGTPDEADIQARIAARAAAKAQRDFAEADRIRNALLAQGIVLKD------GATGTTWE 457


>gi|163735857|ref|ZP_02143286.1| cysteinyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161390943|gb|EDQ15283.1| cysteinyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 490

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 208/494 (42%), Positives = 272/494 (55%), Gaps = 57/494 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IK+YNT  R+  +F+ I+  ++RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG
Sbjct: 1   MTIKLYNTKTRRKEDFEPINKDDVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHTYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH- 121
              VTYVRN TD+DDKI  RA +         AI  IT++ TQ F+ D   +  L P+  
Sbjct: 61  PDHVTYVRNFTDVDDKINARAAES------GRAIGEITAETTQWFLDDMAAVGALEPSIK 114

Query: 122 -------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
                   PRAT +I QM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+  
Sbjct: 115 DRDHQRAMPRATQYIAQMVTMIEDLIAKGHAYAAEGHVLFAVESYSKYGALSGRSIDDMI 174

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESP------WGRGRPGWHIECSAMSSHYLG 228
            G RV    +K+NP DF+LWK S    PGW  P       GRGRPGWHIECSAM+   LG
Sbjct: 175 AGARVEVAPYKRNPMDFVLWKPSDDATPGWAGPVVGGKSIGRGRPGWHIECSAMAHDLLG 234

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDIHGGG DL+FPHHENEIAQS CA      AN+W+HN  L +EG+KMSKS GNF T+
Sbjct: 235 ATFDIHGGGNDLMFPHHENEIAQSTCA--GHDFANVWMHNEMLQVEGKKMSKSLGNFFTV 292

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--- 345
            +LL+      +  P  VIR  ML THYR+P+D+T ++  EAE  +S         G   
Sbjct: 293 RDLLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKRKEAEKAVSDIHLVLLRAGYSP 346

Query: 346 ------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
                            V++ L +DLNT  A+QAL KL   +      +  F ASA  LG
Sbjct: 347 SMVALLKKNNRWQPASEVVNFLRDDLNTHGALQALRKL--NTNGTALQIAEFAASAEFLG 404

Query: 394 IEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +    ++L            +   +  I  ++  R    + K+F  AD IR  LE  G  
Sbjct: 405 LVFDWDNLGLRAGLGVTFVGDHPDTDMIANILLVRQEHKQRKQFEEADRIRALLEKAGVQ 464

Query: 442 LEDYKNPDNGQRMT 455
           + D     +   +T
Sbjct: 465 VNDNAGGLSSFEIT 478


>gi|307579311|gb|ADN63280.1| cysteinyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 442

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 179/461 (38%), Positives = 253/461 (54%), Gaps = 49/461 (10%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNAR  +VF VL  LLR  YG   + Y RNITD+DDKI   A+++ 
Sbjct: 1   MYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG--ALRYARNITDVDDKINTAAQEQG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             I      S IT +    + +D  +L    P  +P AT H+PQ+I +I+ +I   HAY 
Sbjct: 59  VPI------SAITERFCAAYREDMKKLGVEPPDIEPEATAHMPQIIAMIEQLIERQHAYV 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
           A   ++F  +S  +YG  SRR  +E   G RV    +K++P+DF+LWK S+   PGW+SP
Sbjct: 113 AMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIAPYKRDPSDFVLWKPSSDQLPGWDSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WGRGRPGWHIECSAM++ +LG+  DIH GG+DL FPHHENEIAQS CA      A +W+H
Sbjct: 173 WGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFPHHENEIAQSRCAHGSSTFARVWMH 232

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG LN EG KMSKS GN  T++EL+          P   +R A+L  HYR+P+D++   +
Sbjct: 233 NGMLNFEGAKMSKSLGNIETVHELVAKH-------PPEALRYALLSAHYRKPLDWSEALI 285

Query: 328 TEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARES------ 375
            ++   L++   T        ++ II   + +AL +DLNT  A+  L  LA E+      
Sbjct: 286 AQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALDDDLNTPQALAELATLANEARIQLAD 345

Query: 376 TKNHDLLPIFNASAHILGIE----------------VCKEHLNKNISIAIEKLVQERLIL 419
           T +H    +  A   +                       +  N++    I+ L+  R   
Sbjct: 346 TTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPEAWFSQGTNESDETHIQALIDARGAA 405

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            + + F  AD IR QL ++G +LED        +  RW ++
Sbjct: 406 KQARDFVRADAIRAQLAAEGIVLEDT------PQGVRWMKQ 440


>gi|295698510|ref|YP_003603165.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157420|gb|ADD79865.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 469

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 175/490 (35%), Positives = 253/490 (51%), Gaps = 56/490 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT+ RK  +F  I    + MYVCG T YD  HIG+ R   +FD++ + LR+   + 
Sbjct: 2   LKIYNTIHRKKEKFIPIVKGKVSMYVCGITAYDLCHIGHGRTFTIFDMITKYLRFMGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRNITDIDDKII++A      I        +  K T++  KD   L    P  +P 
Sbjct: 61  -VNHVRNITDIDDKIIQKA------IQKKTDYEFLAQKMTEEMRKDFRNLKISQPNIEPN 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKI---DEQKMGTRVP 180
           +T+++   I LI+ +  +G  Y + + +I+F+T   P YG+ S+R      E+K G  + 
Sbjct: 114 STSYVQSTIDLIKILEKNGKTYRSLSGDILFNTKENPEYGNLSKRNEILNLERKFGRNIK 173

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK  +DFILWK +   EP W SPWG+GRPGWH EC+AMS+  LGK FDIHGGG DL
Sbjct: 174 NLQSKKCLSDFILWKSAKEGEPFWNSPWGKGRPGWHTECAAMSTKILGKNFDIHGGGSDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENE  QS  A   +  AN WIH G L ++ +KMSKS+GNF  I ++         
Sbjct: 234 IFPHHENERIQSIVAYG-DNFANYWIHTGMLKIQEKKMSKSDGNFFKIRDICS------- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------QTSTSKGII 347
           ++ + VIR   L +HYR  +++++ ++ +++  L K               +        
Sbjct: 286 AYNSEVIRYFFLSSHYRHHLNYSINKINQSKRSLEKLYFSLIGTNPEHPIQKNDRYLEKF 345

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVCKE 399
           + A + A+ +D NT  A   L K+++E            + L  I    A++LG+     
Sbjct: 346 EKAFIEAMNDDFNTPKAYSILFKISKEINLQKKININIANRLAKILKKMANVLGLLNQSV 405

Query: 400 H---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           H         L +  +  IE ++Q R    K K +  AD IRK L   G ILED  N   
Sbjct: 406 HQFFKINRITLKEIKNQEIENIIQIREKARKNKNWEEADRIRKDLYQIGIILEDRINK-- 463

Query: 451 GQRMTRWKQK 460
               T W+ K
Sbjct: 464 ----TYWRIK 469


>gi|296138339|ref|YP_003645582.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
 gi|296026473|gb|ADG77243.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
          Length = 465

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 156/478 (32%), Positives = 238/478 (49%), Gaps = 47/478 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y++L R++ +F  +      +Y+CG TV    HIG+ R  + FDVL R L     
Sbjct: 1   MTLRLYDSLTREVRDFVPLVEGKAGIYLCGATVQGVPHIGHIRSGVAFDVLRRWLLATGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               + + ++F +    L  L P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILRKAAE------AGRPWWEWAATHEREFTRAYDALGVLPPSAE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  I QM+  ++ +I  GHAY +  ++ F   S+P+YG+ SR+K+D+ + G  +   
Sbjct: 113 PRATGFITQMVTYMERMIERGHAYASAGDVYFSVRSLPDYGALSRQKVDDVQQGETLA-- 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W SPWG GRPGWH+ECSAM++ YLG  FDIH GG+DL+F
Sbjct: 171 AGKRDPLDFTLWKAAKPGEPSWPSPWGDGRPGWHLECSAMATSYLGGQFDIHCGGMDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ+  A   +  AN W+HNG++ + G KMSKS GN ++I  LL   +      
Sbjct: 231 PHHENEIAQAHGA--GDPFANYWLHNGWVTMSGEKMSKSLGNVVSIPNLLTQVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLS 353
            A  +R  +   HYR   +++   L EA     +                 G       +
Sbjct: 283 -AVELRYYLGSAHYRSMQEYSAGALAEAATAYGRIESFVQRTVERTGEVPVGQWSAGFAA 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL--- 401
           AL +DL   SA+  +H   R      +         L     A   ILG++    H    
Sbjct: 342 ALDDDLGVPSALAEVHAAVRAGNAALEAGDLDEARRLAGAVRAMTSILGVDPLDPHWVTE 401

Query: 402 NKNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           N     A++ L       ++ R      K ++ AD  R +L + G  + D  +  +  
Sbjct: 402 NAGDGAAMDALGVLVQAELERRAAARAEKNWAEADAARDRLHAAGIDVTDGADGSSWT 459


>gi|256374515|ref|YP_003098175.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
 gi|255918818|gb|ACU34329.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
          Length = 464

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 163/479 (34%), Positives = 243/479 (50%), Gaps = 48/479 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IY+T  R++ EF+        +YVCG TV    HIG+ R  + FDVL R L     
Sbjct: 1   MSLHIYDTASRELREFRPQISGTASIYVCGATVQGVPHIGHVRSGLNFDVLRRWLART-- 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V  VRN+TDIDDKI+ ++ Q       +        ++ + F      L CL PT+ 
Sbjct: 59  HERVVLVRNVTDIDDKILVKSAQH------DRTWWDWAFEHERAFDDAYEALGCLPPTYA 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+ QM+ L++ +I  GHAY AN ++ F  SS P YG  S +++DE + G    E 
Sbjct: 113 PRATGHVTQMVELMRRLIDAGHAYAANGDVYFSVSSFPEYGKLSGQRVDEVQQGES--EL 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FD+HGGG+DLIF
Sbjct: 171 TGKRDPRDFTLWKAAKPGEPSWPTPWGDGRPGWHLECSAMATEYLGSTFDVHGGGIDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS         A  W+HN ++ L G KMSKS GN ++I  +LE  +      
Sbjct: 231 PHHENEQAQSRAVGDG--FARYWMHNAWVTLSGEKMSKSLGNTVSIPAMLEQVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPAVL 352
            AP +R  ++  HYR  I+++   L EA     +                + G +    +
Sbjct: 283 -APELRYYLVGPHYRSTIEYSPTALDEAVTAYRRIESFLRRVVERTGAVDAGGELGEDFV 341

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK 403
           S++ +D+ T  A+ A+HK  RE     +               A   +LG++   E  + 
Sbjct: 342 SSMDDDMGTPGALAAVHKRVREGNTALESGDDTGARAAASSVRAMTAVLGLDPLSERWSA 401

Query: 404 ----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                      +   +++++ +R+   K + F+ AD +R  L + G  +ED  +     
Sbjct: 402 SAGRESGTSRALKALVDRVLADRVAARKERDFARADALRDSLLAAGIAVEDTPDGPLWT 460


>gi|84515618|ref|ZP_01002980.1| cysteinyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510901|gb|EAQ07356.1| cysteinyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 477

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 206/477 (43%), Positives = 259/477 (54%), Gaps = 41/477 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NT  RK  +F  ID  N+RMY+CGPTVYD AH+GNARP +VFDVL+RLLR  YG K
Sbjct: 4   IRLHNTKSRKREDFVPIDARNVRMYLCGPTVYDRAHLGNARPSLVFDVLFRLLRQIYGAK 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI         +     AI  IT++    +  D   L  L PTH+PR
Sbjct: 64  HVTYVRNFTDVDDKI------NARAAAAGRAIGDITAETIGWYHADLDALGALRPTHEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I QMI +I ++I   HAYEA   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATQYIAQMIAMITDLIAKNHAYEAEGHVLFAVESYAEYGALSGRSIDDMIAGARVEIAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S    PGW+SPWG GRPGWHIECSAM+   LG  FDIHGGG DL FPH
Sbjct: 178 KRNPMDFVLWKPSGDGVPGWDSPWGYGRPGWHIECSAMAHDLLGDSFDIHGGGNDLQFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA    + A  WIHN  L +EG+KMSKS GNF TI +LL+      +  P 
Sbjct: 238 HENEIAQSACAHPHGEFARYWIHNEMLQVEGKKMSKSLGNFFTIRDLLD------QGIPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------IDP 349
            VIRL ML THY + +D+T  R +EA++ L +W       G                 D 
Sbjct: 292 EVIRLVMLGTHYGKTMDWTEARRSEADLTLRRWYGILHGHGFGPDLIRALKADGKWQADA 351

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEHL 401
             L  L NDLNT  AI  LH LA+   K    L  F     +LG+         +     
Sbjct: 352 EFLGVLANDLNTPGAIARLHVLAK--GKTPTALAGFAHGLDMLGLVRDWAAIPLLDGAEA 409

Query: 402 NKNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
             +++ A+   V      R      K ++ AD +R  L S G  + D          
Sbjct: 410 GPDVTPAVAARVDALLAARAAARAAKDWAQADDVRDILTSAGVQVTDVGGQATWSPG 466


>gi|212550657|ref|YP_002308974.1| cysteinyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|229558615|sp|B6YQU1|SYC_AZOPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|212548895|dbj|BAG83563.1| cysteinyl-tRNA synthetase [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 492

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 159/492 (32%), Positives = 243/492 (49%), Gaps = 43/492 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK ++ IYNTL  +   FQ++ P  + +YVCGPTVY   H+G+ARP I FD+L+R L + 
Sbjct: 1   MKNQLFIYNTLTGRKELFQSLYPKRVGLYVCGPTVYGDPHLGHARPAITFDILFRYLMHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D  +   +    +   +     +       + K    L  
Sbjct: 61  NYK--VRYVRNITDVGHLTSDSDLGEDKIARKARLEDLEPMEVVQHYLNLYHKTMDALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQ 173
           L P+ +P A+ HI + I LI+ I+  G+AYE+   + FD        NYG  S + I + 
Sbjct: 119 LPPSIEPHASAHIIEQIQLIKEILEKGYAYESKGSVYFDVEKYNKKYNYGKLSGQNIADM 178

Query: 174 KMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR +  +  K+NP DF LWK+++      W SPW  G PGWH+EC+ MS  YLG +F
Sbjct: 179 LNTTRKLDGQEGKRNPIDFALWKKASSKHIMQWISPWSNGFPGWHLECTTMSRKYLGNLF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DLIFPHHE EIAQ   +   E     W+HN  + + G+KM KS+ NFI + +L
Sbjct: 239 DIHGGGMDLIFPHHECEIAQKVASTGYEG-VKYWMHNNMVTVNGQKMGKSSNNFINLEQL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              T     +S+    +R  +L +HYR  IDF+ + L  ++  LS+  + + +   +   
Sbjct: 298 FNGTNPLLIQSYNPMTVRFFILQSHYRNTIDFSNKALQASKKGLSRLLEANNNIKQLTAQ 357

Query: 351 V--------------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--------- 387
                          + A+ +DLNT   I  L +  R                       
Sbjct: 358 TTNSTVNIEGLRNKSIEAMNDDLNTPIIISYLFEATRIVNSALAKQTQLTTEDIQQLKDF 417

Query: 388 ----SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
                 ++LGI+   ++ N    + + A++ L+Q R+   + K +  AD IR +L   GF
Sbjct: 418 FQLFLFNLLGIKDELKYKNTSYNSFAKAVDLLLQIRVQAKQEKNWIFADKIRDELTVLGF 477

Query: 441 ILEDYKNPDNGQ 452
            ++D KN    +
Sbjct: 478 EVKDTKNGFEWK 489


>gi|304319902|ref|YP_003853545.1| cysteinyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303298805|gb|ADM08404.1| cysteinyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 457

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 180/477 (37%), Positives = 247/477 (51%), Gaps = 39/477 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +  Y+T    +  F   DP  I +Y CGPTVY   HIGNAR  +  D++ RLL+  YG
Sbjct: 1   MSLSFYDTFRGHVEPFTPADPERITVYCCGPTVYAPPHIGNARAALTADLVVRLLKDRYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V + RN TDIDDKII  A+ E   I       ++T++ T  +++    L CL P   
Sbjct: 61  AEKVIFARNFTDIDDKIIAAAKDEGVPI------DVVTARATAAYLEGLDGLFCLRPDVA 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI  M  LI +++  GHAY A   I+FDT S P YG  SR   +    G RV   
Sbjct: 115 PRATAHIDSMQALIGSLLERGHAYGAEGHILFDTQSFPAYGQLSRLDREAILAGARVEIA 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESP-----WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            +K++ ADF+LWK S    PGW  P      G GRPGWHIECSAM +  LG   DIH GG
Sbjct: 175 PYKRDAADFVLWKPSPAEVPGWPVPASWPIDGEGRPGWHIECSAMIASVLGPSIDIHLGG 234

Query: 238 LDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            DL FPHHENEIAQSCC         A  W+HNG L   G KMSKS GN  T  +LL   
Sbjct: 235 QDLRFPHHENEIAQSCCGTDTGETPLARYWLHNGMLRFGGEKMSKSRGNIETPQDLLA-- 292

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVL 352
                +WP   IRLA++   YR+P+D++ + L  ++  L ++ +      +K  +   V+
Sbjct: 293 -----AWPGEAIRLALMSAQYRQPLDWSNELLAGSKAQLDRFYRVVPDGPAKAAMPDWVM 347

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGI--EVCKEHL-----NK 403
           +AL +DLNT  A+  +H+L RE+    D+       A+   LG   +   E       + 
Sbjct: 348 AALEDDLNTPKALAMMHEL-REAAGRGDIEAAHGLKAAGAFLGFFRQTADEWFRGATADG 406

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
                I+  +  R      K ++ AD IR +L ++G +LED      G     W+++
Sbjct: 407 PTESDIDAQIAARQAAKTAKNWAEADRIRDELGAQGIVLED------GPEGVTWRRR 457


>gi|15806673|ref|NP_295393.1| cysteinyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6459435|gb|AAF11225.1|AE002009_5 cysteinyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 532

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 159/501 (31%), Positives = 236/501 (47%), Gaps = 60/501 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I +Y+T++R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R L ++ 
Sbjct: 49  NPNITLYDTMQRQKVPFVPGTPGYVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRALTHFG 108

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHP----SIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YV NITD+   + +    E      +         +  K    F +D   L  L
Sbjct: 109 YQ--VRYVSNITDVGHLLNDADEGEDKLQARARLEQLEPMEVADKYFWSFFRDMDALNVL 166

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+  PRAT HI + I LI+ +I  GHAYE+   + FD  S P YG  S RK+D+Q+ GT
Sbjct: 167 RPSINPRATGHIQEQIKLIEELIEKGHAYESAGSVYFDVRSWPEYGKLSGRKLDDQEEGT 226

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           R   +  K++P DF LWK++ P     W+SPW  G PGWHIECSAMS  YLG+ FDIHGG
Sbjct: 227 REAVRDEKRDPRDFALWKKAEPEHLMRWDSPWSVGFPGWHIECSAMSLKYLGEGFDIHGG 286

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHE     +         A  W+HN  L + G KMSKS GNF TI ++L    
Sbjct: 287 GLDLQFPHHE--AEIAQAEAAGHHFARYWMHNNMLTIGGEKMSKSKGNFTTIQDIL---- 340

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSK 344
              + +   V+R  ++ +HYR   +   +    A     +  +T            + S 
Sbjct: 341 ---KKYDPMVVRFLLVSSHYRSVTEMNEEAFASAANGYRRLSETLHEIERRLKDAPAGSD 397

Query: 345 GIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------- 389
             +D            A+ +D NT  A+ +L  L  E     +  P+   +         
Sbjct: 398 TALDSKIAARVTEFEDAMRDDFNTPKAVASLFGLTGELNTALNAGPVGRDTLERARDAYR 457

Query: 390 ----HILGIEVC-------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                +LG+           +     I   ++ +++ R      K+++ AD +R+ L   
Sbjct: 458 SLGGDVLGLFAETGSAASVAQDDASVIDALMDLVLKARQNYRLQKQYAEADELRETLGKA 517

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G  +ED K+        RWK+
Sbjct: 518 GITVEDTKD------GARWKR 532


>gi|183985048|ref|YP_001853339.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium marinum M]
 gi|229558716|sp|B2HJ21|SYC_MYCMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183178374|gb|ACC43484.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium marinum M]
          Length = 468

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 150/477 (31%), Positives = 229/477 (48%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RAGLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 64  FD--VAFIRNVTDIDDKILNKAAA------AERPWWEWAATYERAFTAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT H+ QM+ LI+ +I  GHAY    ++ FD  S P+YG  S  K+D+   G  V  
Sbjct: 116 EPRATGHVTQMVELIERLIERGHAYAGGGDVYFDVLSYPDYGQLSGHKVDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DLI
Sbjct: 175 -TGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAQFDIHCGGMDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPTMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVL 352
                +R  +   HYR  ++F+   L +A              +        G   P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSDIALQDAVNAYVGVEEFLHRVRSRAGVVVVGDWTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
           +AL +DL+   A+  +H    E  +  D               A   ILG +   E    
Sbjct: 345 AALDDDLSVPIALAEIHHTRAEGNRALDAGDHDAALQSASSIRAMMGILGCDPLDERWES 404

Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + ++  ++ R    + + ++ AD IR +L++ G  + D  +    
Sbjct: 405 RDETSAALAAVDVLVQAELENRQKAREERNWALADEIRNRLKNAGIEVTDTADGPQW 461


>gi|118619335|ref|YP_907667.1| cysteinyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|166225300|sp|A0PV27|SYC_MYCUA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118571445|gb|ABL06196.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium ulcerans Agy99]
          Length = 468

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 152/477 (31%), Positives = 233/477 (48%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RAGLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 64  FD--VAFIRNVTDIDDKILNKAAA------AERPWWEWAATYERAFTAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT H+ QM+ LI+ +I  GHAY    ++ FD  S P+YG  S  K+D+   G  V  
Sbjct: 116 EPRATGHVTQMVELIERLIERGHAYAGGGDVYFDVLSYPDYGQLSGHKVDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DLI
Sbjct: 175 -TGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAQFDIHCGGMDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPTMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTS--KGIIDPAVL 352
                +R  +   HYR  ++F+   L +A       E  L +      +   G   P   
Sbjct: 287 --PAELRYYLGSAHYRSILEFSDIALQDAVNAYVGVEEFLHRVRSRVGAVVVGDWTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
           +AL +DL+   A+  +H +  E  +  D               A   ILG +   E    
Sbjct: 345 AALDDDLSVPIALAEIHHIRAEGNRALDAGDHDAALQSASSIRALMGILGCDPLDERWES 404

Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + ++  ++ R    + + ++ AD IR +L++ G  + D  +    
Sbjct: 405 RDETSAALAAVDVLVQAELENRQKAREERNWALADEIRNRLKNAGIEVTDTADGPQW 461


>gi|217968073|ref|YP_002353579.1| cysteinyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|226735054|sp|B8E391|SYC_DICTD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|217337172|gb|ACK42965.1| cysteinyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 465

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 159/470 (33%), Positives = 236/470 (50%), Gaps = 26/470 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YNTL R+  +F+ ++P  + MY CGPTVY++AHIGN R  I  D+L R+L   Y 
Sbjct: 1   MELYLYNTLTRRKEKFEPLNPPYVGMYTCGPTVYNYAHIGNLRTYIFEDILKRVL--LYN 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
              V +V NITD+     +    E                I    T+ F +D  +L  L 
Sbjct: 59  GYIVKHVMNITDVGHLTSDADEGEDKIEREAKKERRTAWEIAEFYTEAFKRDIKKLNILE 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P    +AT+HI   I LI  +   G+ Y+ ++ I FDTS +P+YG  + + ++    G R
Sbjct: 119 PDIWCKATDHIKDFIDLILILEKKGYTYKTSDGIYFDTSKVPDYGKLAGQDLENLLPGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     KKNP DF LWK S      +  W+SPWG G PGWHIECSAMS+ YLG+ FDIH 
Sbjct: 179 VEYNPEKKNPTDFALWKFSPKDVKRQMEWDSPWGIGFPGWHIECSAMSTKYLGQPFDIHC 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQS  A   +  A  W+H  FL +  ++M KS GNFIT+++L E  
Sbjct: 239 GGIDHIPIHHTNEIAQSEAAY-DKPMAKYWLHGEFLVMGEKRMGKSEGNFITLSDLEE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGII 347
               + +     R   L  HYR P+ FT   L  A+  L +          + ++     
Sbjct: 296 ----KGYHPLSYRYFCLTAHYRSPLRFTWTALESAQRALFRLYENMKRYPQENASYDKKY 351

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-PIFNASAHILGIEVCKEHLNKNIS 406
           +     A+ +DL+   A+    +L ++     ++          +LG+ +      K   
Sbjct: 352 EEEFHKAINDDLDMPKALAITWELVKDDQVPPEVKRATLLQFDKVLGLSLNNPPEIKIEI 411

Query: 407 IAIE-KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                KLV+ER +  K K +  AD IR+++ +KG+I+ED       ++ T
Sbjct: 412 PEEIWKLVEERELARKNKDWEKADKIREEIRNKGYIIEDTPQGPRVKKAT 461


>gi|87124845|ref|ZP_01080693.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86167724|gb|EAQ68983.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 506

 Score =  492 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 171/522 (32%), Positives = 240/522 (45%), Gaps = 88/522 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++  NTL R++  F+ +    + +Y CG TVYD  H+G+AR  I +DVL R L +     
Sbjct: 3   LRFTNTLSRRMEPFRPLKEGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKI+ RA  E        ++  ++ +N   F  D   L  L P   PR
Sbjct: 61  AVTFVQNFTDIDDKILNRAADE------GSSMEAVSERNIAAFHADMEALGILRPDRMPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  +  +  LI  +   G AY A+ ++ F       YG  S R + EQ+          
Sbjct: 115 ATRCLDAIRDLIGELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLGEQQTNAEGRVADA 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG DL
Sbjct: 175 EEARKQHPFDFALWKGAKPGEPSFPSPWGAGRPGWHIECSAMVREELGDTIDIHLGGADL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQS  A   E  A +W+HNG +N+ G KMSKS GNF TI  LLE+      
Sbjct: 235 VFPHHENEIAQSEAASGQE-LARLWLHNGMVNVGGEKMSKSLGNFTTIRALLES------ 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQTS--- 341
              A  +RL +L  HYR+P+DF+   L  A                      WP  +   
Sbjct: 288 GLSAMTLRLFVLQAHYRKPLDFSSDALEAASSGWKGLNAALNLGTGHGTALGWPNAAPLP 347

Query: 342 ------------TSKGIIDP--------AVLSALYNDLNTVSAIQALHKLAR-------- 373
                         KG  DP          ++A+ +DLN+  A+  + +LAR        
Sbjct: 348 KGAVVEGSIGLLDQKGSTDPDPLLGLRQRFIAAMDDDLNSSGALAVVFELARPLRGLANR 407

Query: 374 ------------ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE-----KLVQER 416
                       ES        +    A +LG+        +    +++       +  R
Sbjct: 408 LDRGDDAGITASESAVLRSRWLLLRELAAVLGLRAEAPPQAEASKSSVDTTAIEAAIAAR 467

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               + K ++ AD IR +L ++G  L D         +T W+
Sbjct: 468 QAAKQAKNYAEADRIRSELTAQGIELIDKPGG-----ITEWR 504


>gi|332796177|ref|YP_004457677.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332693912|gb|AEE93379.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 467

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 168/483 (34%), Positives = 249/483 (51%), Gaps = 54/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL RK  +F  ++   ++MYVCGPTVYD+ HIG+ R  + +D + R LR      
Sbjct: 2   IRVFNTLGRKFEDFSTVENGIVKMYVCGPTVYDYVHIGHGRTFVAYDAIVRYLRLKGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  ++NITDIDDKII RA++         +   I    ++ ++++ + L        PR
Sbjct: 61  -VIRIQNITDIDDKIINRAKE------TGKSWEEIVDYYSKDYLENLSLLKVKI-DLHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K D+   G       
Sbjct: 113 VTQHIKEIINFVQGLIDKGHAYVAPSGSVYFDVDTYPHYGELSNTKKDQWNQGEEF--VK 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG+DLIFP
Sbjct: 171 EKRHPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGEQFDIHGGGMDLIFP 230

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+      +     W+H  FLN+ G KMSKS GN IT+ + L       + + 
Sbjct: 231 HHENERAQTESLTG-KPWVRYWMHVAFLNIRGEKMSKSLGNIITLKDAL-------KKYG 282

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
           A V+R   L +HYR PIDF+ + L ++++ L +          I                
Sbjct: 283 ADVLRYWYLSSHYRSPIDFSEENLEQSKVSLQRLKDALAVLKDILKEGPKSYSKDEDIKV 342

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFNASAH 390
                        A+ ND +T +A++ +H++A          R+       L  F     
Sbjct: 343 QREIIQKIKEFDEAMSNDFDTATALKKIHEIANIVFSKLQNTRDFLAASIALDGFRIFNE 402

Query: 391 ILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           + G+   +  L  + I   I+ +++ R +L + K +  +D IR  LES G  + D K+  
Sbjct: 403 VFGVMDEEMGLAYERIYEVIDGIIEVRNLLRQKKMYDLSDQIRSILESHGIKVLDSKDKS 462

Query: 450 NGQ 452
             +
Sbjct: 463 TWR 465


>gi|160903262|ref|YP_001568843.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|187629839|sp|A9BGT9|SYC_PETMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|160360906|gb|ABX32520.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 469

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 173/490 (35%), Positives = 261/490 (53%), Gaps = 55/490 (11%)

Query: 1   MKK--KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           MK+   IKIY+TL  ++ +   +    I++Y+CGPTVY+  HIGNARP+I+FD   R L 
Sbjct: 1   MKRFPTIKIYDTLSGQVVDLVPVKEGEIKIYLCGPTVYNLLHIGNARPIIIFDAFRRFLE 60

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           Y   +  VT V+N TDIDDKIIE+A++E      N     +  +   ++ +D T L   A
Sbjct: 61  YIGYK--VTLVQNFTDIDDKIIEQAKKE------NLPFEEVGKRYIIEYWRDMTALKARA 112

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
               P+ TN++ ++I  I+ +   G+AY+A N ++ F+      YG  S RK+++ K+G 
Sbjct: 113 FNFHPKTTNYVDEIISYIKELEEKGYAYKAENGDVYFEVEKFSRYGELSHRKVEDLKVGV 172

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           RV    +KKNP DF LWK S   EP WESPWG+GRPGWHIECS MSS  LG  FDIH GG
Sbjct: 173 RVEVSEYKKNPLDFALWKASKEGEPFWESPWGKGRPGWHIECSVMSSEILGDTFDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHENE AQ+      +  A  W+HNG + +   KMSKS GN   + +LL     
Sbjct: 233 NDLIFPHHENERAQAIAKSG-KDFAKYWMHNGMIRMAQDKMSKSLGNVWYLRDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------- 347
             + + + V+++ +L  HYR PID + + L   E+ +++  ++                 
Sbjct: 287 --KKFDSDVLKIFILSKHYRIPIDVSEELLRNQEVSVNRVKESLNEAETFFNGKVPCPQK 344

Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNASAH 390
                  +  ++S+L ND +T S +  + +L+R+  K  +             I N    
Sbjct: 345 MNYFKEQEEYLISSLSNDFDTPSVVARIFELSRDLNKALNSRDEETIKNNYYIIRNIYGS 404

Query: 391 ILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +LG+    E + KN   ++  +E ++  R  L + K ++ +DYIR  L   G  ++D   
Sbjct: 405 VLGVFETNEQIQKNNVELNQLMEIILNVRSALREEKLYNLSDYIRDNLSKIGIEIKDT-- 462

Query: 448 PDNGQRMTRW 457
                  T+W
Sbjct: 463 ----PEGTKW 468


>gi|255327696|ref|ZP_05368762.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295370|gb|EET74721.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 472

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 162/484 (33%), Positives = 240/484 (49%), Gaps = 44/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y++    I EF+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY   
Sbjct: 1   MTMRFYDSASATIREFEPVVPGEARIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPS----IPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  VT VRN+TDIDDKI+ ++             N+    +  +  + F +    L    
Sbjct: 61  K--VTTVRNVTDIDDKILAKSADSMEPGFEGEFPNEQWWALAYRFEKVFAQAYAALGIDP 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT HIP+M  LIQ++I  GHAY A   + ++ FD  S   YG+ + + +++ + 
Sbjct: 119 PTYEPRATGHIPEMFALIQHLIDRGHAYPALDDSGDVYFDVRSWDKYGALTNQSVEDMQD 178

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK     EP    WESPWGRGRPGWH+ECSAM+  YLG  FD
Sbjct: 179 SADADPR-GKRDPRDFALWKGYKEGEPLTASWESPWGRGRPGWHLECSAMAGKYLGSRFD 237

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAA--GDDFANFWMHNGMVTYEGEKMSKSIGNTISPAQML 295

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------ 346
           +  +         V+R  +   HYR  +D+    L EA   + +      +         
Sbjct: 296 QMAR-------PLVVRYYLGSAHYRSILDYRPSSLQEAATAIERVEAFLAATQDVLKPGR 348

Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGI---- 394
            +  A   A+ +D+N   A+  LH+  R             +      A A +LG+    
Sbjct: 349 EVPQAFAEAMDDDVNIPRALAVLHEQTRAGNAALAAGEDASEAANAVMAMAEVLGLAQLM 408

Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
               E      ++ +   I+ ++ ER      K ++ AD +R  L S G  ++D  N  +
Sbjct: 409 SFNAEGTSGAEHEALDALIQAVLAERADARAQKDWAKADAMRDLLASAGVQVKDGANGSS 468

Query: 451 GQRM 454
               
Sbjct: 469 WSVG 472


>gi|296242820|ref|YP_003650307.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296095404|gb|ADG91355.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 481

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 175/496 (35%), Positives = 246/496 (49%), Gaps = 60/496 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KIYNTL + + + Q ++P  ++MYVCGPTVYD  H+G+ R  +++DV  R L   
Sbjct: 1   MLPELKIYNTLTKTVEKIQPVEPGLLKMYVCGPTVYDSTHVGHGRAYVMYDVFKRYLNSR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V +V NITDIDDKII RAR E      N     I    T+++++    L      
Sbjct: 61  GY--HVIHVMNITDIDDKIINRARDE------NRDWMEIVETYTKEYLEALNSLNVQI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR T HI ++I  IQ +I  GHAY   +  + FD ++  +YG  S R + ++      
Sbjct: 112 HHPRVTQHISEIIEFIQRLIEKGHAYVTPSGSVYFDVNTYEDYGRLSGR-LVKEAWSQEP 170

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KKNP DF LWK + P EP WESPWGRGRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 171 DFLSEKKNPYDFALWKAAKPGEPFWESPWGRGRPGWHIECSVMSTRYLGERFDIHGGGTD 230

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS  A       +IW+H G + +   KMSKS  N + I E++       
Sbjct: 231 LIFPHHENERAQSESALGSRPWVSIWMHVGMVMVGADKMSKSLKNIVPIKEVV------- 283

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS------ 353
           + W    +R   LM+HYR+P+ F+ + L  A   L +  Q S+    +    +       
Sbjct: 284 KKWGGRTLRYWYLMSHYRKPVSFSEESLEIASEHLRRLNQVSSLLQKLWREAVEPHRASD 343

Query: 354 ------------------ALYNDLNTVSAIQALHKLARESTKN----------HDLLPIF 385
                             AL  D NT  A+ +L++      ++          +  + I 
Sbjct: 344 EDLKILRNLLKAHYSFHVALSEDFNTPEAVASLNEFTTIVFRDIQYNPKYILVNTAVRIL 403

Query: 386 NASAHILG-IEVCKEHL-NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
               ++ G +E   E L  +++   I+ LV  R  L   K +  AD IR +L   G  L 
Sbjct: 404 RDFDNVFGVLETAPEVLVEEDVDPYIKILVDVRKELRNRKMYDLADMIRSELGKLGVTLS 463

Query: 444 DYKNPDNGQRMTRWKQ 459
           D  +       T W +
Sbjct: 464 DKGS------ETTWIR 473


>gi|240172166|ref|ZP_04750825.1| cysteinyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 468

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 154/480 (32%), Positives = 231/480 (48%), Gaps = 46/480 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  + P+ 
Sbjct: 64  FD--VAFIRNVTDIDDKILNKAAA------AGRPWWEWAATYERAFTAAYDALDVMPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QMI L++ +I  GHAY  + ++ FD  S PNYG  S  KID+   G  V  
Sbjct: 116 EPRATGHITQMIELMERLIETGHAYTGDGDVYFDVLSYPNYGQLSGHKIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DLI
Sbjct: 175 -AGKRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARTYLGSEFDIHCGGMDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTS--KGIIDPAVL 352
              P +R  +   HYR  ++F+   L +A       E  L +      +   G   P   
Sbjct: 287 --PPELRYYLGSAHYRSMLEFSDTALQDAVNAYVGVEDFLHRVRSRVGAVLPGEWTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
            AL +DL+   A+  +H    E  +  D                   ILG +   E    
Sbjct: 345 EALDDDLSVPIALAEIHHARAEGNRALDAGDHEGALRSAGSIRTMMGILGCDPLDERWES 404

Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                     + + +   ++ R    + + ++ AD IR +L++ G  + D  +       
Sbjct: 405 RDETTAALAAVDVLVHAELENREKAREQRNWALADQIRDRLKNAGIEVTDTADGPQWTLG 464


>gi|311745980|ref|ZP_07719765.1| cysteine--tRNA ligase [Algoriphagus sp. PR1]
 gi|126576191|gb|EAZ80469.1| cysteine--tRNA ligase [Algoriphagus sp. PR1]
          Length = 496

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 179/505 (35%), Positives = 248/505 (49%), Gaps = 65/505 (12%)

Query: 1   MK-KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           MK   +K+YNTL RK   FQAI+P  + +YVCGPTVY  AH+G+ARP I FD + R L +
Sbjct: 1   MKSHNLKLYNTLSRKKENFQAINPPFVGLYVCGPTVYGDAHLGHARPAITFDTVNRYLTH 60

Query: 60  YYGEKCVTYVRNITDID----------DKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
              +  V YVRNITD+           DKI ++A+ E            I  + T  + +
Sbjct: 61  L--DYRVRYVRNITDVGHLQGDADEGEDKIAKKAKLEKLEPM------EIAQQYTDSYHR 112

Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFS 166
           D   L    P  +PRAT HIP+ I L++ I+  G AYE N  + FDT        YG  S
Sbjct: 113 DMALLNTWKPNIEPRATGHIPEQIALVEAILKEGLAYEVNGSVYFDTLKYNEKTPYGRLS 172

Query: 167 RRKIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
            R I+E   G+R    +  K+NP DF LWK + P     WESPWG G PGWH+EC+AMSS
Sbjct: 173 GRVIEELMSGSRDLDGQSEKRNPVDFALWKNAAPEHLMKWESPWGIGFPGWHLECTAMSS 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            YLG  FDIHGGG+DL+FPHHE EIAQ    +  +   N W+HN  + + G+KM KS GN
Sbjct: 233 KYLGNHFDIHGGGMDLMFPHHECEIAQGNACNHQDP-VNYWMHNNMITINGQKMGKSLGN 291

Query: 285 FITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------ 337
           FIT+ EL +   K   +++    IR  +L  HYR  +DF+   L  A+    K       
Sbjct: 292 FITLQELFKGEHKLLEQAYSPMTIRYFILTAHYRSTLDFSNDALKAAQKGYKKLINGLRI 351

Query: 338 ---PQTSTSKGIIDPAVLS-----------ALYNDLNTVSAIQALHKLARESTKNHD--- 380
               +  TS   +D   +            A+ +D NT  AI  L  L ++    +    
Sbjct: 352 AKMLEYQTSDVPVDEKQIEQIENSITNAYRAMDDDFNTAQAIGHLFNLLKKINSIYTGQL 411

Query: 381 ------------LLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
                       L+  F      ILG+    E  +   +  I  L+         + ++ 
Sbjct: 412 KPAVFGEEVFSKLISTFITFVEDILGL---TEEKSDTQNKMINLLLTLYSEAKTARDYAK 468

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQ 452
            D IR  L+  GF+++D K+  +  
Sbjct: 469 VDEIRAGLKDLGFVVKDMKDKIDWA 493


>gi|146300023|ref|YP_001194614.1| cysteinyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
 gi|187629820|sp|A5FHM5|SYC_FLAJO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146154441|gb|ABQ05295.1| cysteinyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
          Length = 492

 Score =  491 bits (1264), Expect = e-136,   Method: Composition-based stats.
 Identities = 164/487 (33%), Positives = 226/487 (46%), Gaps = 41/487 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + +KIYN+L  +   F+ I   N+ MYVCGPTVY   H+GN R  + FDV++R   +  
Sbjct: 6   SQPLKIYNSLSGEKENFKPIHEGNVGMYVCGPTVYSNVHLGNVRTFMSFDVIFRYFLHLD 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD+    DD      +    +         +  + T  F         L
Sbjct: 66  YK--VRYVRNITDVGHIVDDVDEGEDKIAKKARLEQLEPMEVVQRYTVDFHDILKAFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ II  G  YEAN  + FD        NYG  S R I++  
Sbjct: 124 PPSIEPTATGHIIEQIEIIKKIIDTGIGYEANGSVYFDVVKYNETNNYGVLSGRNIEDML 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K+NP DF LWK++ P     W SPW  G PGWH+EC+AMS+ YLG  FD
Sbjct: 184 ANTRDLDGQSDKRNPQDFALWKKAEPEHIMRWPSPWSDGFPGWHLECTAMSTKYLGNHFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+          N W+H   L L G+KM+KS GN I   E+L
Sbjct: 244 IHGGGMDLKFPHHECEIAQNEACTGQSP-VNYWMHTNMLTLNGKKMAKSTGNNILPGEIL 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
                   +++ A V R  ML  HYR  +DF+   +T AE    +  +   +        
Sbjct: 303 SGDNTILSKAFSASVTRFFMLQAHYRSILDFSDDAITAAEKGYKRLMEALEALPAIKAGS 362

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNAS- 388
                      A   A+ +D NT   I  L +  R         E+    DL     A  
Sbjct: 363 SSSVDFAAWKQACYDAMNDDFNTPILIAQLFEAVRYINLLKEGKETISAEDLKSFSTAIN 422

Query: 389 ---AHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                +LG+   K  +  N  +   +  L+  R      K F+ +D IR QL + G  L+
Sbjct: 423 AFVFDVLGLSDEKAADGNNDKLEGVVNMLIGMRNQARADKNFALSDQIRDQLIALGIQLK 482

Query: 444 DYKNPDN 450
           D K   +
Sbjct: 483 DGKEGTS 489


>gi|24214563|ref|NP_712044.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|30316164|sp|Q8F525|SYC_LEPIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|24195528|gb|AAN49062.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 471

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 162/490 (33%), Positives = 241/490 (49%), Gaps = 54/490 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+ YN+L  +  +F   DP+ + +Y CGPTVY+FAHIGN R  +  DVL R L+     
Sbjct: 3   EIQFYNSLSGRKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +T   NITDIDDKII  +      I    +I   T+  T+ F +D   ++     H P
Sbjct: 63  VDMT--MNITDIDDKIIRDS------IASKKSIIEFTAPWTKAFFEDLKTVSAEILEHYP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           +AT+ IP+M+ +IQ +   G  Y+ +  + F      NYG  S+      K GTR   ++
Sbjct: 115 KATDSIPEMVDIIQKLQKKGLVYKKDESLYFSIQKFQNYGKLSKIDTSGMKTGTRYDTDE 174

Query: 183 YHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           Y K++  DF+LWK      E  W++  G GRPGWH+ECSAM     G   DIH GG+DL+
Sbjct: 175 YEKEDVRDFVLWKSPKLEGETSWDTLVGTGRPGWHLECSAMIRKVYGSGVDIHTGGVDLL 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   E     W+H+  L ++G+KMSKS GNF T+ +L++      + 
Sbjct: 235 FPHHENEIAQSEGAFPEESFVKTWLHSEHLLVDGQKMSKSKGNFYTLRDLIQ------QG 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------ 349
                IR  ++ THYR  ++F+  R+ EA   + K          ++P            
Sbjct: 289 LDPKAIRFLLISTHYRSKLNFSTDRIAEASANIRKIQNCLDRILELEPDIKADFYFLFSI 348

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
                       +L +DLN   A+  + +  ++     D            + I      
Sbjct: 349 PFVQTWKKEFEESLADDLNISKALAVVFESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+    E     +   I+ L++ER I  K K F+ +D IR QL ++G ++ED K    
Sbjct: 409 ILGVLNF-ESKKDLLDSEIDSLIEERQIARKNKDFARSDAIRDQLLAQGILIEDTK---- 463

Query: 451 GQRMTRWKQK 460
                RW++K
Sbjct: 464 --EGIRWRKK 471


>gi|83942575|ref|ZP_00955036.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83846668|gb|EAP84544.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 487

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 206/486 (42%), Positives = 272/486 (55%), Gaps = 46/486 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK  +F  ID  N+RMYVCGPTVYD AH+GNARP+IVFDVL RLLR+ YG+ 
Sbjct: 4   IKLHNTKTRKREDFTPIDDKNVRMYVCGPTVYDRAHLGNARPVIVFDVLNRLLRHVYGDA 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA Q         +I  IT++ TQ F+ D   +  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAQS------GRSIGEITAETTQWFLDDMAAVGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IPQM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATAYIPQMVAMIEDLIAKGHAYAAEGHVLFSVESYKAYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-------------- 230
           K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K               
Sbjct: 178 KRNPMDFVLWKPSDDATPGWDSPWGRGRPGWHIECSAMADELLWKEPLRQDRLSDEAKSA 237

Query: 231 ---FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
              FDIHGGGLDL FPHHE+EIAQSCCA+  ++ A  W+HN  L +EG+KMSKS GNF T
Sbjct: 238 PHVFDIHGGGLDLQFPHHEDEIAQSCCANGTDEMARYWLHNEMLQVEGKKMSKSLGNFFT 297

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +LL+      +  P  VIR  ML THYR+P+D+T ++  EA   L+KW   +      
Sbjct: 298 VRDLLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKRDEATKTLTKWMDLTRDLEPC 351

Query: 348 DPAV-------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           DPA        + AL +DLNT  A+  L+ L  +  K  D        +     +  K  
Sbjct: 352 DPAAFKPDQKLIDALADDLNTHLALTYLNALTAQPQKLLDHARWLGFLSDKSREDDAKAR 411

Query: 401 L----------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                      ++  +    +L + R + +K K FS+ D ++  L + G  +   K    
Sbjct: 412 AAYTTSFGSGGSEVETELANRLDELRQMAMKTKDFSNVDALKSALLAAGCEVRISKLGTE 471

Query: 451 GQRMTR 456
                 
Sbjct: 472 VIAGPT 477


>gi|332879668|ref|ZP_08447361.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
 gi|332682385|gb|EGJ55289.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
           F0087]
          Length = 502

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 161/491 (32%), Positives = 232/491 (47%), Gaps = 44/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 11  MKHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRALKFL 70

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD     DD  +   R    S         I  K T  F K       
Sbjct: 71  GYK--VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 128

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDE 172
           L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  SRR I+E
Sbjct: 129 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 188

Query: 173 QKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
               TR    +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+ YLG  
Sbjct: 189 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 248

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL FPHHE EIAQ             W+H   L + G++MSKS GN+I   +
Sbjct: 249 FDIHGGGMDLKFPHHECEIAQGKAGHGESP-VRYWMHANMLTMNGQRMSKSTGNYILPMQ 307

Query: 291 LL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------- 339
           L+     F  + +   VIR   +  HYR  +D + + +  AE   ++  +          
Sbjct: 308 LITGNNTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFTRLMEAMKILNELTT 367

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKNHDLL 382
                T+            AL +D N+   I  L +  +               + ++L 
Sbjct: 368 EVTHPTALPIAEWKQKCYEALLDDFNSPILIAHLFEAVKWVFQLKNGEEKISVEELNELK 427

Query: 383 PIFNAS-AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            + NA    +LG+  E      N  +   ++ L+  R+     K ++ +D IR  L   G
Sbjct: 428 TLMNAFVFDVLGLQAEQLAADNNDKLDGVLQLLIDMRMEARANKDWALSDKIRDALLPLG 487

Query: 440 FILEDYKNPDN 450
             L+D K+  +
Sbjct: 488 IQLKDGKDGTS 498


>gi|255524399|ref|ZP_05391356.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296187519|ref|ZP_06855914.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255511956|gb|EET88239.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|296048041|gb|EFG87480.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 471

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 158/482 (32%), Positives = 234/482 (48%), Gaps = 43/482 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+ RK  +F  I    + MY CGPTVY+FAHIGN R  I  DVL + LRY   E  V
Sbjct: 5   VYNTMSRKKEKFVPILEGKVGMYTCGPTVYNFAHIGNLRTYIFEDVLKKSLRYLGYE--V 62

Query: 67  TYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V NITD+     D      + E  +   N ++  I       F+ D  +L    PT  
Sbjct: 63  KHVMNITDVGHLQSDADEGEDKMELGAKRENKSVWEIAKFYENAFLDDCKKLNVETPTVI 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
            RAT HI  MI LI+ +   G+ Y +N  + ++     +Y   +   ++E + G RV   
Sbjct: 123 CRATEHIDDMINLIKKLEEKGYTYISNGNVYYEIDKFEDYNKLANLSMEELEAGNRVEVD 182

Query: 183 YHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +KKNP DF+LW    +       W+SPWGRG PGWH+ECSAMS  YLG+  D+H GG+D
Sbjct: 183 ENKKNPLDFVLWFTNSKFKNQIMQWDSPWGRGFPGWHLECSAMSMKYLGERIDVHCGGVD 242

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            I  HH NEIAQS  A    K  N W+H  FL L+  KMSKS G+F+T+N+L E      
Sbjct: 243 HIPVHHTNEIAQSEGAIG-HKWVNYWMHGEFLVLDSGKMSKSKGDFLTVNKLEE------ 295

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
             +   V R   L + YR+ + F+   L +AEI   K      +                
Sbjct: 296 EGFNPLVYRYFCLQSRYRKQLLFSFDALKDAEIAYKKLKNKVAALAKDAKEDQRLDLEKI 355

Query: 351 ------VLSALYNDLNTVSAIQALHKLARES-TKNHDLLPIFNASAHILGIEVCKEHLNK 403
                     + +DLN  +A   L ++ +++   + +   +  +   +L + + + +  +
Sbjct: 356 KNYKNKFAEKISDDLNMPNAFTVLWEVVKDNELTSREKCHLVESFDTVLSMNLFEPNEEQ 415

Query: 404 NIS-----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           N+        +++L++ER +  K K +S AD IR +L      + D K        T+WK
Sbjct: 416 NLDSNIDSELVDELIKERDMARKNKDWSKADEIRDKLSFMNIEILDSK------EGTKWK 469

Query: 459 QK 460
            K
Sbjct: 470 LK 471


>gi|297184120|gb|ADI20239.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
          Length = 495

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 160/487 (32%), Positives = 231/487 (47%), Gaps = 43/487 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + I N+L  +   F  +   N+ MYVCGPTVY   H+GNAR    FD+++R L++   +
Sbjct: 9   PLNIENSLTGEKEAFVPVHEGNVGMYVCGPTVYSDVHLGNARTFTSFDMIFRYLKHIGYK 68

Query: 64  KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             V YVRNITD     +D      +    +         I  + T  F K    L    P
Sbjct: 69  --VRYVRNITDAGHLENDADAGEDKISKKARLEQVEPMEIVQRYTVDFHKVMDALNAFPP 126

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQKM 175
           + +P AT HI + I ++Q I+  G AYE+N  + FD ++      +YG  S RK+DE + 
Sbjct: 127 SIEPTATGHISEQIEMVQTILDKGWAYESNGSVYFDVTAYNANGGDYGILSGRKMDELQA 186

Query: 176 GTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           GTR    +  K+NPADF LWK+++P     W SPW  G PGWH+ECSAMS+ YLG+ FDI
Sbjct: 187 GTRALDGQEEKRNPADFALWKKASPTHIMRWPSPWSIGFPGWHLECSAMSTKYLGETFDI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG+DL FPHHE EIAQ+       K A  W+H   L L G++MSKS GN I   EL  
Sbjct: 247 HGGGMDLKFPHHECEIAQNSACSG-HKGARYWMHANMLTLNGKRMSKSTGNTILPRELFA 305

Query: 294 TKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-- 350
                  + +   V+R  M+  HY   +DF+   L  AE    +          + P+  
Sbjct: 306 GDSPLLDKGFSPSVVRFFMMQAHYSSVLDFSNDALLAAEKGHDRLLGALEKLDTLVPSKE 365

Query: 351 -----------VLSALYNDLNTVSAIQALHKLAR-----ESTKNHDL--LPIFNASA--- 389
                         A+ ++ NT   I  L +  +     E     +   L  F AS    
Sbjct: 366 STIALQPWIDKCYQAMSDNFNTPILIAHLFEAIKWISTAEGNIGLNAGELETFKASLNAF 425

Query: 390 --HILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
              +LG+       +    + +  A+  +++ R      K + +AD IR QL   G  L+
Sbjct: 426 TFELLGLRTKSADSSNAYKEALDKAMSLVIELRAQARLNKDWGTADIIRDQLHDAGIQLK 485

Query: 444 DYKNPDN 450
           D  +  +
Sbjct: 486 DGADGTS 492


>gi|73669162|ref|YP_305177.1| cysteinyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|109894908|sp|Q46BZ5|SYC_METBF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|6599478|gb|AAF18751.1|AF164201_1 cysteinyl-tRNA synthetase [Methanosarcina barkeri]
 gi|72396324|gb|AAZ70597.1| cysteinyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 471

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 164/487 (33%), Positives = 238/487 (48%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F+ +    + +Y CGPTVY+  HIGN R  ++ D + R L Y   + 
Sbjct: 2   LQVYNTLTRKKEVFKPLKEGEVSIYACGPTVYNMPHIGNYRTFLMADNIVRSLEYLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  ++          ++   T K T +F K    L     +  PR
Sbjct: 61  -VKLVMNITDIDDKTIRDSKA------AGMSLKDFTDKYTAEFFKGLDMLNIKRASAYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT +I  MI L Q +I  G AYE    + +  SS P+YG  S+   D   +G  V  ++Y
Sbjct: 114 ATENIDSMIELTQKLIDKGMAYEKGGSVYYRISSFPDYGKLSKLDFDSIIIGASVDVDEY 173

Query: 184 HKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L K STP E      +ESPWG+ RPGWHIECS M+ +  G   D+H GG+D
Sbjct: 174 DKDNPRDFALLKTSTPEEIERGIYYESPWGKIRPGWHIECSVMAMNCFGPTLDMHLGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +  A  WIH   L +EG KMSKS GN  T+ E++       
Sbjct: 234 LIFPHHENEIAQSEGATG-KPFACYWIHGEHLIVEGEKMSKSKGNVFTLPEIVG------ 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
             +   V+R   L  HYR+ +D++      A+    +  +T  +                
Sbjct: 287 -KYGGEVVRFMFLSVHYRKKLDYSDAFAENAKNNYLRLKETLENLEFSLESAENTDYPGD 345

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
                    ++     AL +D N   A+    +L+R + K  +          L  ++  
Sbjct: 346 EEVLKILPELETQFREALEDDFNIPKALTVFKELSRTANKYLESEKNRHVLEKLYSLYRQ 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +  LG+    E   K I   + +LV+ER    K K ++ +D IR++++S G+I++D K 
Sbjct: 406 FSDTLGL--FSESGKKEIPTEVMRLVEEREAARKKKDWTVSDAIREKIKSLGYIVQDTKE 463

Query: 448 PDNGQRM 454
             N +  
Sbjct: 464 GPNVKET 470


>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
          Length = 500

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 184/507 (36%), Positives = 258/507 (50%), Gaps = 72/507 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++K+YNT+ ++      I P  I +YVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 5   KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHL- 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  VT+VRN TD+DDKII+RA +        +    ++++   +++ D   L CL PTH
Sbjct: 64  -DYDVTFVRNFTDVDDKIIDRANKN------GEDPLDLSNRFCDEYLVDMGALQCLPPTH 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR + H+  +I +I+ II     Y    ++ F     PNYG  S + ++  + G RV  
Sbjct: 117 QPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS HYL   FDIHGGG DL 
Sbjct: 177 DSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLK 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG + +   KM+KS  NF TI E+         S
Sbjct: 237 FPHHENEIAQTCAA-CEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITA-------S 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL--------------SKWPQTSTSKGII 347
           +    +R  ++   YR P+ FT  +L  +   L               K  QT+  K II
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFTASQLESSSEALYCLSPYQDALSEDGGKSEQTAEGKDII 348

Query: 348 DP---AVLSALYNDLNTV--------SAI----QALHKLARESTKNH--------DLLPI 384
                   S + +DLNT          A+     +L KL +   K          ++   
Sbjct: 349 KKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIEKA 408

Query: 385 FNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYI 431
                 +LG+       E+ KE   K +         I +L++ER+   K K F+ +D I
Sbjct: 409 AREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEI 468

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWK 458
           R++L  KG  L D        + T W+
Sbjct: 469 REKLTRKGIALMDI------GKETVWR 489


>gi|206900189|ref|YP_002251400.1| cysteinyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|226735053|sp|B5YAD0|SYC_DICT6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|206739292|gb|ACI18350.1| cysteinyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 465

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 157/470 (33%), Positives = 235/470 (50%), Gaps = 26/470 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL ++  +F+ ++P  + MY CGPTVY++AHIGN R  I  D+L R+L   Y 
Sbjct: 1   MDLYLYNTLTKRKEKFEPLNPPYVGMYTCGPTVYNYAHIGNLRTYIFEDILKRVL--IYN 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
              V +V NITD+     +    E            +   I    T+ F +D  +L  L 
Sbjct: 59  GYIVKHVMNITDVGHLTSDADEGEDKIEREAKKERRSAWEIAEFYTEAFKRDLKKLNILE 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P    +AT+HI   I LI  +   G+ Y  ++ I FDTS +P+YG  + + ++    G R
Sbjct: 119 PDIWCKATDHIQDFIDLILILERKGYTYRTSDGIYFDTSKVPDYGKLAGQDLENLLPGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     KKNP DF LWK S      +  W+SPWG G PGWHIECSAMS+ YLG+ FDIH 
Sbjct: 179 VEYNPEKKNPTDFALWKFSPKDVKRQMEWDSPWGVGFPGWHIECSAMSTKYLGQPFDIHC 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQS  A   +  A  W+H  FL +  ++M KS GNFIT+++L E  
Sbjct: 239 GGIDHIPIHHTNEIAQSEAAY-DKPMAKYWLHGEFLIMGEKRMGKSEGNFITLSDLEE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------QTSTSKGII 347
               + +     R   L  HYR P+ FT   L  A+  L +          + +      
Sbjct: 296 ----KGYHPLSYRYFCLTAHYRSPLKFTWSALEAAQRALFRLYENMKKYPKEEAKYDEKY 351

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-PIFNASAHILGIEVCKEHLNKNIS 406
           +     A+ +DL+   A+    +L ++     ++          +LG+ +      K   
Sbjct: 352 EEEFHKAINDDLDMPKALAITWELVKDDKLAPEVKRATLLQFDKVLGLSLDNPPEIKIEI 411

Query: 407 IAIE-KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                KLV+ER +  K K +  AD IR++++++G+I+ED       ++ T
Sbjct: 412 PEEIWKLVEERELARKNKDWEKADRIREEIKNRGYIIEDTPQGPRIKKAT 461


>gi|328949107|ref|YP_004366444.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449431|gb|AEB15147.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 510

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 165/516 (31%), Positives = 244/516 (47%), Gaps = 76/516 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ RKI EF  I    +  Y CGPTVY++AHIGN R  +  D L R L +   +K
Sbjct: 3   LRLYNTMGRKIEEFVPIHEGFVGFYGCGPTVYNYAHIGNLRAYVFLDTLDRTLTFLGYDK 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLAPT 120
              +V NITDI     +    E   +      + ++  +    T  F  D  RL  + P 
Sbjct: 63  --KHVMNITDIGHLTGDADEGEDKMLKTAQERHQSVLEVAKFYTDAFFNDIDRLNIIRPD 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
              +AT H+  MI LI+ I  +GH Y +   + +D ++ P+YG  +   +D+ K G R+ 
Sbjct: 121 VVCKATEHVQDMIELIKRIEANGHTYMSGGNLYYDVTTYPDYGKLANLNLDDLKAGARIE 180

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+ FDIH GG
Sbjct: 181 VDQNKRNPYDFVLWFTKSKFENQALTWDSPWGRGYPGWHIECSAMSMKYLGEHFDIHTGG 240

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL----------EGRKMSKSNGNFIT 287
           +D I  HH NEIAQS  A    K  N W+HN FL +          +  KMSKS+GNF+T
Sbjct: 241 IDHIPIHHTNEIAQSEGATG-HKWVNYWLHNEFLVIAKDKKAAESGQAEKMSKSHGNFLT 299

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTS 343
           +  L++      + +     R  +L  HYR+ I F+   +  A+     L+ +  + + +
Sbjct: 300 LQSLID------KGYNPLDYRFFLLGGHYRKQIYFSWDAMDSAKNSRTALVQRVARLAQN 353

Query: 344 KGIID---------------------------PAVLSALYNDLNTVSAIQALHKLARE-S 375
            G  D                               +AL NDL+T  A+  + K  ++ S
Sbjct: 354 AGGADSLNYSKIYSKGEACKTENLSEKAKEYIEKFQAALENDLSTPVALSCIQKAVKDGS 413

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLN------------------KNISIAIEKLVQERL 417
            K  + L +      ++G+ + K   +                     +  I+ LV ER+
Sbjct: 414 LKPEESLELVRRMDSVIGLNLVKSAADFLAEQEKEKKASVPDHSGDPEAQEIDALVAERV 473

Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
              K K F+ AD IR  L S+G I+ D  N    +R
Sbjct: 474 EAKKAKNFARADEIRNMLSSRGIIITDTPNGAVWKR 509


>gi|31794757|ref|NP_857250.1| cysteinyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|57117128|ref|YP_177992.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|121639500|ref|YP_979724.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148663444|ref|YP_001284967.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148824786|ref|YP_001289540.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167967115|ref|ZP_02549392.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215405629|ref|ZP_03417810.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215429081|ref|ZP_03427000.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215432553|ref|ZP_03430472.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|218755364|ref|ZP_03534160.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219559657|ref|ZP_03538733.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224991997|ref|YP_002646686.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253800621|ref|YP_003033622.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           1435]
 gi|254234153|ref|ZP_04927477.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis C]
 gi|254366143|ref|ZP_04982187.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254552689|ref|ZP_05143136.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260184497|ref|ZP_05761971.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260198622|ref|ZP_05766113.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260202768|ref|ZP_05770259.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289441010|ref|ZP_06430754.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289445174|ref|ZP_06434918.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289555844|ref|ZP_06445054.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           605]
 gi|289571822|ref|ZP_06452049.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T17]
 gi|289572233|ref|ZP_06452460.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis K85]
 gi|289747417|ref|ZP_06506795.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           02_1987]
 gi|289752295|ref|ZP_06511673.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T92]
 gi|289755709|ref|ZP_06515087.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           EAS054]
 gi|289763759|ref|ZP_06523137.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis GM
           1503]
 gi|294993700|ref|ZP_06799391.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297636255|ref|ZP_06954035.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297733248|ref|ZP_06962366.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|306786487|ref|ZP_07424809.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu003]
 gi|306790852|ref|ZP_07429174.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu004]
 gi|306791175|ref|ZP_07429477.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu005]
 gi|306795960|ref|ZP_07434262.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu006]
 gi|306801208|ref|ZP_07437876.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu008]
 gi|306805420|ref|ZP_07442088.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu007]
 gi|306974052|ref|ZP_07486713.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu010]
 gi|307081761|ref|ZP_07490931.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu011]
 gi|307086377|ref|ZP_07495490.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu012]
 gi|313660578|ref|ZP_07817458.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|61248033|sp|P0A634|SYC_MYCTU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61248034|sp|P0A635|SYC_MYCBO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166225298|sp|A1KPR6|SYC_MYCBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166225299|sp|A5U8Q5|SYC_MYCTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781686|sp|C1AI39|SYC_MYCBT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|31620354|emb|CAD95797.1| CYSTEINYL-TRNA SYNTHETASE 1 CYSS1 (CYSTEINE--TRNA LIGASE 1) (CYSRS
           1) (CYSTEINE TRANSLASE) [Mycobacterium bovis AF2122/97]
 gi|41352809|emb|CAE55617.1| CYSTEINYL-TRNA SYNTHETASE 1 CYSS1 (CYSTEINE--TRNA LIGASE 1) (CYSRS
           1) (CYSTEINE TRANSLASE) [Mycobacterium tuberculosis
           H37Rv]
 gi|121495148|emb|CAL73634.1| Cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124603821|gb|EAY61784.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis C]
 gi|134151655|gb|EBA43700.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148507596|gb|ABQ75405.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148723313|gb|ABR07938.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis F11]
 gi|224775112|dbj|BAH27918.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253322124|gb|ACT26727.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           1435]
 gi|289413929|gb|EFD11169.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289418132|gb|EFD15333.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289440476|gb|EFD22969.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           605]
 gi|289536664|gb|EFD41242.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis K85]
 gi|289545576|gb|EFD49224.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T17]
 gi|289687945|gb|EFD55433.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           02_1987]
 gi|289692882|gb|EFD60311.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T92]
 gi|289696296|gb|EFD63725.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
           EAS054]
 gi|289711265|gb|EFD75281.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis GM
           1503]
 gi|308328975|gb|EFP17826.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu003]
 gi|308332797|gb|EFP21648.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu004]
 gi|308340288|gb|EFP29139.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu005]
 gi|308343627|gb|EFP32478.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu006]
 gi|308348094|gb|EFP36945.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu007]
 gi|308352017|gb|EFP40868.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu008]
 gi|308356654|gb|EFP45505.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu010]
 gi|308360609|gb|EFP49460.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu011]
 gi|308364197|gb|EFP53048.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu012]
 gi|328460352|gb|AEB05775.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
           4207]
          Length = 469

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/477 (31%), Positives = 232/477 (48%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDI+DKI+ +A                 + + + F      L  L P+ 
Sbjct: 64  YD--VAFIRNVTDIEDKILAKAAA------AGRPWWEWAATHERAFTAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V  
Sbjct: 116 EPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+
Sbjct: 175 -AGKRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN +++  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTS--KGIIDPAVL 352
                +R  +   HYR  ++F+   + +A          L +      +   G   P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
            AL +DL+   A+  +H +  E  +  D               A   ILG +   +    
Sbjct: 345 EALDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWES 404

Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + ++  +Q R    + + ++ AD IR +L+  G  + D  +    
Sbjct: 405 RDETSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTADGPQW 461


>gi|289705924|ref|ZP_06502301.1| cysteine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557352|gb|EFD50666.1| cysteine--tRNA ligase [Micrococcus luteus SK58]
          Length = 485

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 164/491 (33%), Positives = 241/491 (49%), Gaps = 56/491 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           + Y+T   +I +F+ + P    +Y CG TV    H+G+ R  IVFD+L R L        
Sbjct: 4   RFYDTRTAQIRDFEPLVPGEASVYYCGATVQGMPHVGHVRSAIVFDILIRWLEATGL--R 61

Query: 66  VTYVRNITDIDDKIIERARQEHPS-------IPINDAISIITSKNTQQFVKDTTRLACLA 118
           VT VRN+TDIDDKI++R+   H +        P  +    +  +  + F      L    
Sbjct: 62  VTSVRNVTDIDDKILDRSAASHEAGFEASDLYPAREPWWALAYRFEKAFDAAYLALGVRR 121

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT H+P+M  LI+ ++  GHAY A     ++ FD  S   YG  +R+++++ + 
Sbjct: 122 PTYEPRATGHVPEMFALIERLMERGHAYPAQDGSGDVYFDVRSWERYGELTRQRVEDMQD 181

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK + P EP    WESPWG GRPGWH+ECSAMS+ YLG  FD
Sbjct: 182 APDADPR-GKRDPRDFALWKGAKPGEPATAVWESPWGAGRPGWHLECSAMSTKYLGAEFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A      A  W+HNG +   G KMSKS GN I+  E+L
Sbjct: 241 IHGGGLDLRFPHHENELAQSTAAGDG--FARFWLHNGLVTYGGEKMSKSVGNTISPEEML 298

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDP 349
              +          +R  +   HYR  +D+    L EAE  + +   +   + + G + P
Sbjct: 299 GMAR-------PTAVRYFLGQAHYRSQLDYRPGALDEAEAAVERIEGFTARARAAGAVPP 351

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
                       A  +A+ +DLN   A+ ALH+  R                 L    A 
Sbjct: 352 APDGALADRVPAAFRTAMEDDLNVPQALAALHEAVRAGNSALAGQDLDAAAARLAEVEAM 411

Query: 389 AHILGIEVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             +LG++   E  +         +   +   ++ R      K +++AD IR  L + G +
Sbjct: 412 TAVLGLDDVPEGDDAAAGPVSDALDSLVRSQIEARAQARADKDWATADRIRDALAAAGVV 471

Query: 442 LEDYKNPDNGQ 452
           LED  +    +
Sbjct: 472 LEDGADGATWR 482


>gi|228473829|ref|ZP_04058571.1| cysteine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
 gi|228274670|gb|EEK13504.1| cysteine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
          Length = 494

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 162/493 (32%), Positives = 230/493 (46%), Gaps = 46/493 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KI+N+L  +   F  +  +N+ MYVCGPTVY   H+GN R  + FD +YR LR+ 
Sbjct: 1   MNHQLKIFNSLTGEKEIFVPLHANNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRALRFL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD     DD  +   R    S         I  K T  F K       
Sbjct: 61  GYK--VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDE 172
           L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNRRGLNYGELSRRNIEE 178

Query: 173 QKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
               TR    +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+ YLG  
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGDQ 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL FPHHE EIAQ             W+H   L + G++MSKS GN+I   +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHGQSP-VRYWMHANMLTMNGQRMSKSTGNYILPMQ 297

Query: 291 LL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
           L+     F  + +   VIR   +  HYR  +D + + +  AE   ++  +          
Sbjct: 298 LISGDNTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAVKILNELTS 357

Query: 341 --------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKNHD 380
                   S+           AL +D N    I  L +  +               +  +
Sbjct: 358 EIEHPGPLSSEIEQWKQKCYDALLDDFNAPILIAHLFEAVKWIFQVKSGEEKISIQELEE 417

Query: 381 LLPIFNAS-AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           L  + NA    +LG+  E      N  +   ++ L+  R+     K F+ +D IR +L +
Sbjct: 418 LRSLVNAFVFDVLGLKNEELNAANNDRLDGVLQLLINMRMEARANKDFALSDKIRDELLA 477

Query: 438 KGFILEDYKNPDN 450
            G  L+D K   +
Sbjct: 478 LGIQLKDGKEGTS 490


>gi|284029008|ref|YP_003378939.1| cysteinyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283808301|gb|ADB30140.1| cysteinyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 480

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 156/492 (31%), Positives = 244/492 (49%), Gaps = 60/492 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T    + +F  + P  + +Y CG TV    H+G+    +VFDVL R L     
Sbjct: 1   MTLRLYDTATAAVRDFVPVHPGKVGIYHCGLTVQGAPHVGHIYKEVVFDVLRRWLERSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT + N+TDI+DKI+ ++ +                +  ++       L C  PT++
Sbjct: 61  Q--VTVIANVTDIEDKILAKSAEREIPWW------AHAYEFERELHWAYDVLGCRPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+M+ +IQ +I  GHAY A     ++ FD  S P YG  S +KID+ +     
Sbjct: 113 PRATGHIPEMLEMIQQLIDGGHAYVAQDGSGDVYFDVKSWPAYGELSNQKIDDMEAAEDA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P DF LWK  T   P    W +PWGRGRPGWH+ECSAM+  YLG  FDIHGG
Sbjct: 173 DPR-GKRDPRDFALWKGHTEGVPLTASWPTPWGRGRPGWHLECSAMAGKYLGGEFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS      +K A  W+HN  +   G KMSKS GN   +  ++E  +
Sbjct: 232 GLDLRFPHHENELAQSTAV--GQKFARFWMHNALVTAAGEKMSKSLGNGAIVRNVVERVR 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------QTSTSKGIIDP 349
                     +R  ++ +HYR  ++F+   L EA     +         + + +   +DP
Sbjct: 290 -------PIELRFYLVQSHYRSVVEFSFGALDEAATSFQRIEGFVTRATELTGAADRVDP 342

Query: 350 A-------VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILG 393
           A        ++A+ +DL T +A+  LH   R+  K           + L    +   + G
Sbjct: 343 AAVELPADFVAAMDDDLGTPAAMAVLHTTVRDGNKLLADGDSPALRETLATVRSMLDVFG 402

Query: 394 IEVCKE----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           ++   E           L + +   ++ L+ +R    + K ++++D IR +L++ G ++E
Sbjct: 403 LDPLAEPWVSRTGTTDELTEVVDGLVQALLDQRQAARERKDYAASDQIRDRLKALGVVVE 462

Query: 444 DYKNPDNGQRMT 455
           D      G R T
Sbjct: 463 DTP---QGPRWT 471


>gi|256419903|ref|YP_003120556.1| cysteinyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
 gi|256034811|gb|ACU58355.1| cysteinyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
          Length = 499

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 169/500 (33%), Positives = 240/500 (48%), Gaps = 63/500 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++KIYN+L R+   F ++ P ++ MYVCGPTV   +H+G+ARP I FDV+YR L++   
Sbjct: 2   SELKIYNSLHRQKEVFTSLYPGHVGMYVCGPTVSGESHLGHARPYITFDVVYRYLQFLGY 61

Query: 63  EKCVTYVRNITDID----------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD            DKI +RA+ E            +  K T  F     
Sbjct: 62  K--VRYVRNITDAGHFEEEGREAEDKIAKRAQLEKLEPM------ELVQKYTNLFHWAFL 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
           R  CL P+ +P AT HI + I +I+ I+  G+AYE+N  + FD        +YG  S R 
Sbjct: 114 RFNCLEPSIEPTATGHIVEQIEMIKTIMEKGYAYESNGSVYFDVKKYAESHDYGILSGRV 173

Query: 170 IDEQKMGT--RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
           +++    +   +  +  K N  DF LWK + P     W SPWG G PGWHIECSAMSS Y
Sbjct: 174 LEDMLESSNRELDGQEEKINNVDFALWKNAPPEHIMRWPSPWGEGFPGWHIECSAMSSKY 233

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LGK FDIHGGG+DL FPHHE EIAQS  A   E  A  W+HN  + + GRKM K+  N I
Sbjct: 234 LGKQFDIHGGGMDLQFPHHECEIAQSEIAHG-ELMARYWMHNNMITINGRKMGKAYNNTI 292

Query: 287 TINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
            + EL         +++    IR  +L THYR  +DF+ + L  AE  L +         
Sbjct: 293 KLTELFTGNHHLLEKAYSPMTIRFFILQTHYRSTLDFSNEALQAAEKGLQRLWAAFEVLQ 352

Query: 338 -----PQTSTSKGIIDPAVL-------SALYNDLNTVSAIQALHKL-----------ARE 374
                         +D  V          + +D NT   +  L +L            + 
Sbjct: 353 KLSYTADAQPINEELDKQVRQWCLECEEFISDDFNTAKVLANLFELSPVINSIKGGQVKM 412

Query: 375 STKNHDLLPIFNA-----SAHILGIEVCK-EHLNKNISIAIEKLVQERLILLKMKKFSSA 428
              + +   +           ILG++       N  +   I+ L++ R      K ++++
Sbjct: 413 HELSEETFQLLKKTWQNFLIDILGLQPETLATDNSKLDGVIQLLMEMRKEAKGRKDYAAS 472

Query: 429 DYIRKQLESKGFILEDYKNP 448
           D IR QL + G  L+D K+ 
Sbjct: 473 DKIRNQLLAVGIQLKDEKDG 492


>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 563

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 185/533 (34%), Positives = 261/533 (48%), Gaps = 101/533 (18%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N++ +K   F       + MYVCG T YDF+H+G+AR  + FDVLYR L++   E 
Sbjct: 48  LQLFNSMTKKKELFVPRVEGKVGMYVCGVTPYDFSHVGHARAYVAFDVLYRYLKFLGYE- 106

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRN TDIDDKII+RA Q        + ++ ++S+   +F+ D   L CL PTH+PR
Sbjct: 107 -VDYVRNFTDIDDKIIKRANQN------GETVTSLSSRFITEFLADVAELQCLPPTHEPR 159

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +I LI  II +G AY  + ++ F   + P Y S S R +D  + G+RV     
Sbjct: 160 VTEHIENIIKLITEIIKNGKAYVVDGDVYFSVDNFPEYLSLSGRILDHNRAGSRVAVDTR 219

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NPADF LWK +   EP WESPWG GRPGWHIECSAMS+HYLG VFDIHGGG DLIFPH
Sbjct: 220 KRNPADFALWKAAKEGEPSWESPWGNGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPH 279

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS  A    +    W+HNGF+N++ +KMSKS  NF TI +++         +  
Sbjct: 280 HENELAQSRAAYPESE-VKCWMHNGFINIDDQKMSKSVNNFFTIRDIITL-------YHP 331

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------STS 343
             +R  ++ THY+   + + + L  A   +    QT                     +  
Sbjct: 332 LALRFFLMRTHYKSDANHSDKALEIASDRVYYIFQTLYDCDEVVSLHREENTSAPVPAEE 391

Query: 344 KGIID---PAVLSALYNDLNTVSAIQALHKLARESTKN---------------------- 378
           + ++D    A L ++ +DL T   +    +L +    N                      
Sbjct: 392 QKLVDDHHKAFLESMSDDLRTTDVLDGFMELLKAINGNLNDLKKLQQKLEQQKKKQQQQK 451

Query: 379 -------------HDLLPIFNASAH-------ILG----------IEVCKEHLNKNISIA 408
                         D +   NA          ILG          ++  KE   K   + 
Sbjct: 452 KQQQKQQRPQKQPEDHIQALNALGAEIKHKLSILGLMPPSPLAEVLKQLKEKALKRAGLT 511

Query: 409 IEKL---VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            E L   ++ R+     K+F  +D IRK+L SKG  L D          T W+
Sbjct: 512 EESLSEQIEHRIAARNNKQFEVSDQIRKELASKGIALMDEPT------GTVWR 558


>gi|15834784|ref|NP_296543.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|11387147|sp|Q9PLE0|SYC_CHLMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|7190201|gb|AAF39040.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 475

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 164/494 (33%), Positives = 244/494 (49%), Gaps = 61/494 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F   +   +++Y CGPTVYD+AHIGN R  +  D+L R+L +   
Sbjct: 1   MDLFLYNTLSREKERFLPSNDP-VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGY 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 60  --SVHHVMNITDVDDKTLAGARKK------GCSLEKYCQPYINAFFADLETLHILKADAY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYGS S   ++E +  +R+  
Sbjct: 112 PHATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDA 171

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 172 DEYDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS    R +     W+H+  L ++G+KMSKS GNF T+ +LL+    
Sbjct: 232 VDNIFPHHENEIAQSESLSR-KPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQ---- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             + +    +R  +L  HYR  ++FT + L  A   L +     +               
Sbjct: 287 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPE 344

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
                     A ++++ NDLN  SA+ +L    R+     D                   
Sbjct: 345 VGSACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQH 404

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +L +      +LG+    +    +I   +  LV+ER    K+K +  AD +R ++ S+GF
Sbjct: 405 ILSLLRQIDQVLGVLPFSQ---ADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGF 461

Query: 441 ILEDYKNPDNGQRM 454
            +ED K     +++
Sbjct: 462 AIEDGKTGMKVKKI 475


>gi|323359183|ref|YP_004225579.1| cysteinyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275554|dbj|BAJ75699.1| cysteinyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 464

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 164/479 (34%), Positives = 241/479 (50%), Gaps = 49/479 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  + + +F  +DPSN+ +YVCGPTV    HIG+ R  + FD+L R L + YG
Sbjct: 1   MTVRLYDTRAQALRDFAPLDPSNVTVYVCGPTVQSGPHIGHVRAALAFDLLRRWLAHRYG 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+VRN+TDIDDK++  A    P          +  +   +F +    +  L PT++
Sbjct: 61  --RVTFVRNVTDIDDKVLANATATEPWW-------ALAYRMELEFSRAYAAIGILPPTYE 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  + QM  LI  +I  GHAY A  ++ FD  S P YG  +R+ +D  +       +
Sbjct: 112 PRATASVTQMQELIAELIERGHAYAAAGDVYFDVRSWPAYGELTRQSLDAMEPAADADPR 171

Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK +   EP    W SPWG GRPGWHIECSAMS  YLG  FDIHGGGLD
Sbjct: 172 -GKRDPRDFALWKGAKDDEPASATWASPWGAGRPGWHIECSAMSRRYLGPEFDIHGGGLD 230

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS  A   +  A  W+HNG + ++G+KMSKS GNF   +++L       
Sbjct: 231 LRFPHHENEIAQSTAA--GDAFARYWVHNGLVTVDGQKMSKSLGNFTLASDVLAEN---- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------TSTSKGI 346
                 V+R A+   HYR  +D + +   EA   L +                T    G 
Sbjct: 285 ---DPRVVRYALAAAHYRSNLDVSDRAFAEAASALGRIATFRQRVLRAAGADPTVILPGD 341

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVC 397
           +     +A+ +DL+   A+  +H+  R      D   +           A   ILG++  
Sbjct: 342 VPETFAAAMDDDLSVPQALAVVHETVRAGNVALDAGDLDAGVAAHRSVAAMLGILGLDAD 401

Query: 398 KEHL-----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +  +        +   ++ ++ +R      K +++AD IR  + + G  LED     + 
Sbjct: 402 EPAVATGSSETALDALVQTMITQRAQARADKDWAAADRIRDAIAAAGITLEDTPAGTHW 460


>gi|291296187|ref|YP_003507585.1| cysteinyl-tRNA synthetase [Meiothermus ruber DSM 1279]
 gi|290471146|gb|ADD28565.1| cysteinyl-tRNA synthetase [Meiothermus ruber DSM 1279]
          Length = 481

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 158/492 (32%), Positives = 226/492 (45%), Gaps = 50/492 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL+R+   F    P  + +YVCGPTVY   H+G+AR  IV+DVL R LRY   
Sbjct: 1   MPLQIYNTLKRQKEPFVPATPGYVGIYVCGPTVYSDPHLGHARGPIVYDVLRRWLRYQGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V +V NITD+     +  + E   +            +  K    +  +   L  L 
Sbjct: 61  K--VRFVSNITDVGHLTDDADQGEDKILRRAKLERLEPMEVAEKYMWSYFDEMQALNVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P   PRA  HIP+ I L + ++  GHAY  N  + F   S P +G  S R I+EQ+ G R
Sbjct: 119 PDITPRAAGHIPEQIELTEALLERGHAYVVNGSVYFRVKSWPAFGKLSNRDIEEQEAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           V  +  K++P DF LWKR+ P     W SPWG G PGWHIECSAMS  YLG  FDIH GG
Sbjct: 179 VEVREEKEDPRDFALWKRAEPEHIMRWNSPWGEGFPGWHIECSAMSLKYLGDGFDIHAGG 238

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHH  E   +         A  W+H+  + L G+KM+KS GN IT+ EL      
Sbjct: 239 VDLQFPHH--EAEIAQAEAAGHPFARYWMHHYHVLLNGQKMAKSTGNLITLAELRAR--- 293

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
               +    IR  +L +HYR  +DFT + L  A+    +                     
Sbjct: 294 ----YEPMYIRFYLLNSHYRSVLDFTDEGLEAAKNGYLRLLNAYREVRRLLHNAPAGRHA 349

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
               +   +     +AL +DLNT  AI A      E  K                +F   
Sbjct: 350 GLDRAIENLRKDFANALNDDLNTAQAIAAFFNFVTELNKALTERPGRESLQAAEQVFAEL 409

Query: 389 AH-ILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
              +LG+   +    +     +   +  L++ R    + + F+ +D IR++L   G ++E
Sbjct: 410 GEGVLGLFPARVLEHQLGGALLDGLVNLLLEIREEARRNRNFALSDRIRERLIELGVVVE 469

Query: 444 DYKNPDNGQRMT 455
           D +     +  T
Sbjct: 470 DTREGPKWKVGT 481


>gi|300775102|ref|ZP_07084965.1| cysteine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
 gi|300506917|gb|EFK38052.1| cysteine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
          Length = 488

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 163/487 (33%), Positives = 235/487 (48%), Gaps = 42/487 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++KIYN+L  +   F+ I   N+ MYVCGPTVY   H+GN R  + FD +YR L +   
Sbjct: 1   MQLKIYNSLTAEKEIFKPILEGNVGMYVCGPTVYSNVHLGNVRTFLSFDFIYRTLMHLGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRNITD     DD  ++  R    +         I  K T  F K       L 
Sbjct: 61  K--VRYVRNITDAGHLTDDGNVDNDRFVKQTRLEKLEPMEIVQKYTVDFHKVLDMFNLLP 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQK 174
           P  +P AT HI + I L Q +I  G AYE+N  + FD         NYG  S+R I+E  
Sbjct: 119 PNIEPTATGHIVEQIELTQKLIERGFAYESNGSVYFDVLEYNKRGLNYGELSKRNIEELF 178

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  KKNP DF LWK+++P     W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 179 ANTRDLDGQGEKKNPQDFALWKKASPAHIMRWNSPWGEGFPGWHLECTAMSTKYLGETFD 238

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ    +      N W+H   L +  ++MSKS GN+I   +L+
Sbjct: 239 IHGGGMDLKFPHHECEIAQGKACNDAAP-VNYWMHANMLTMNSQRMSKSTGNYILPMQLV 297

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA- 350
                F  + +   ++R   L  HYR  +D +   +  +E    +  +       I P  
Sbjct: 298 TGDNDFFEKPFHPSIVRFCFLQAHYRSVLDISNDAMIASEKGFIRLMEAVKVLNSITPDD 357

Query: 351 --------------VLSALYNDLNTVSAIQALHKLAR------------ESTKNHDLLPI 384
                            AL +D N+   I  L +  +             +    DL   
Sbjct: 358 TKQSGFNLQEWKNKAYDALTDDFNSPILIAHLFEAVKYIFALNDGKETISTADLEDLKTT 417

Query: 385 FNAS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            NA    +LG++  +E+ N+ +   ++ L++ R    K K F  +D IR +L ++G  L+
Sbjct: 418 LNAFIFDVLGLQTVEENNNEKLDQTLKVLIELRNQARKSKNFELSDQIRDKLLAEGIELK 477

Query: 444 DYKNPDN 450
           D ++  +
Sbjct: 478 DGRDGTS 484


>gi|117927293|ref|YP_871844.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|166200127|sp|A0LQZ8|SYC_ACIC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|117647756|gb|ABK51858.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 469

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 174/480 (36%), Positives = 245/480 (51%), Gaps = 50/480 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T  R + EFQ  DP  + MYVCG TV    HIG+ R  +VFDVL R L  +  
Sbjct: 1   MPLRLHDTRSRGLREFQPADPPRVTMYVCGATVQAPPHIGHLRSGLVFDVLVRWLAVHGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V + RN+TDIDDKI+  A  E            +  +N + F      L C+ PT +
Sbjct: 61  D--VVFCRNVTDIDDKILRVAAAEGIPWW------QVAYRNYRLFDSAYRLLGCVPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT HIPQ+I LI+ +I  GHAY A  ++ F   S P YG  S R  D  + G      
Sbjct: 113 PWATGHIPQIIALIRRLIDAGHAYPAGGDVYFAVRSFPAYGGLSGRDPDALQAGESDGV- 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++P DF LWK + P EP WESPWG GRPGWHIECSAMS+ YLG  FDIHGGGLDL+F
Sbjct: 172 -HKRDPLDFALWKGAKPGEPSWESPWGPGRPGWHIECSAMSTTYLGSTFDIHGGGLDLLF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS  A      A  W+HNG + L G KMSKS GN +++++LLE  +      
Sbjct: 231 PHHENECAQSQAAGDG--FARYWLHNGLVTLRGEKMSKSLGNVLSMDQLLELVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQTSTSKGIID 348
               +R  ++  HYR  +DF+                 L  A+ L+ + P      G+ID
Sbjct: 283 -PIELRYYLIGAHYRSTLDFSEESLEEAAAAYRRIEGFLLRAQELVGELPAADPQTGLID 341

Query: 349 ---PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEV 396
              P  ++AL +DL    A+  +H + R+                L    A   ++G+  
Sbjct: 342 RLPPEFVAALDDDLAVPRALAVMHSVVRQGNAALAETDKTAVRRFLGEVTAMLDVMGLRP 401

Query: 397 CK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                  + L + +      ++ ER    + + F++AD +R +L   G ++ED  +    
Sbjct: 402 PDDGSRLDALRRVVDNLARLVLDEREAARQRRDFATADALRARLTDAGIVVEDTPSGPRW 461


>gi|45657880|ref|YP_001966.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|59798557|sp|Q72QT1|SYC_LEPIC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|45601121|gb|AAS70603.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 471

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 163/490 (33%), Positives = 240/490 (48%), Gaps = 54/490 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+ YN+L  +  +F   DP+ + +Y CGPTVY+FAHIGN R  +  DVL R L+     
Sbjct: 3   EIQFYNSLSGRKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +T   NITDIDDKII  +      I    +I   T+  T+ F +D   ++     H P
Sbjct: 63  VDMT--MNITDIDDKIIRDS------IASKKSIIEFTAPWTKAFFEDLKTVSAEILEHYP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           +AT+ IP+M+ +IQ +   G  YE +  + F      NYG  S+      K GTR   ++
Sbjct: 115 KATDSIPEMVDIIQKLQKKGLVYEKDESLYFSIQKFQNYGKLSKIDTSGMKTGTRYDTDE 174

Query: 183 YHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           Y K++  DF+LWK      E  W +  G GRPGWH+ECSAM     G   DIH GG+DL+
Sbjct: 175 YEKEDVRDFVLWKSPKLEGETSWYTLVGTGRPGWHLECSAMIRKVYGSGVDIHTGGVDLL 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   E     W+H+  L ++G+KMSKS GNF T+ +L++      + 
Sbjct: 235 FPHHENEIAQSEGAFPEESFVKTWLHSEHLLVDGQKMSKSKGNFYTLRDLIQ------QG 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------ 349
                IR  ++ THYR  ++F+  R+ EA   + K          ++P            
Sbjct: 289 LDPKAIRFLLISTHYRSKLNFSTDRIAEASANIRKIQNCLDRILELEPDIKADFYFLFSI 348

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
                       +L +DLN   A+  + +  ++     D            + I      
Sbjct: 349 PFVQTWKKEFEESLADDLNISKALAVVFESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           ILG+    E     +   I+ L++ER I  K K F+ +D IR QL ++G ++ED K    
Sbjct: 409 ILGVLNF-ESKKDLLDSEIDSLIEERQIARKNKDFARSDAIRDQLLAQGILIEDTK---- 463

Query: 451 GQRMTRWKQK 460
                RW++K
Sbjct: 464 --EGIRWRKK 471


>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 175/482 (36%), Positives = 249/482 (51%), Gaps = 73/482 (15%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD +HIG+AR  + FDVLYR LR+   E  V YVRN TD+DDKII RA +  
Sbjct: 1   MYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHLEYE--VNYVRNFTDVDDKIIARANE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               + +    ++ +  Q+F  D T L CL P+ +P  ++H+PQ+I +I+ II +  AY 
Sbjct: 57  ----MGEDPINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYR 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
              ++ F     P YG  S RK+++ + G RV     KKNPADF LWK +   EP W+SP
Sbjct: 113 VEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSP 172

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG GRPGWHIECSAMS+ YLG  FDIHGGG+DL+FPHHENEIAQSC A +    +  WIH
Sbjct: 173 WGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACKQSNIS-YWIH 231

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NGF+ ++  KMSKS GNF TI ++++        +    +RL ++ THYR PI+++  +L
Sbjct: 232 NGFVTIDSEKMSKSLGNFFTIRQVIDI-------YHPLALRLFLIGTHYRSPINYSDVQL 284

Query: 328 TEAEILLSKWPQTS------------TSKGIIDP-----------AVLSALYNDLNTVSA 364
             A   +    QT             T K  + P             L+++ +DL+T   
Sbjct: 285 ESASDRVFYIYQTLHDCQNAMDQDDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVV 344

Query: 365 IQALHKLAREST-------------KNHDLLPIFNASAHIL------------GIEVCKE 399
           + AL    +                +   L  +      +L             +   +E
Sbjct: 345 LAALSDPLKTINDLLHTRKGKKQELRLESLAALEKVIRDVLTILGLMPASYSEALLQLRE 404

Query: 400 HL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                +K     I + ++ER +  K K++  +D IRK L + G  L D  +       T 
Sbjct: 405 KALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPD------GTT 458

Query: 457 WK 458
           W+
Sbjct: 459 WR 460


>gi|305680320|ref|ZP_07403128.1| cysteine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659851|gb|EFM49350.1| cysteine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 507

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 154/486 (31%), Positives = 230/486 (47%), Gaps = 55/486 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  ++I++T  R + +F  + P    MY+CG T     HIG+ R  + FD++ R L    
Sbjct: 37  RVTLRIFDTRTRSLRDFVPLTPGRATMYLCGATPQTNPHIGHVRSGVAFDIVRRWLMASG 96

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V +VRN+TDIDDKI+ +A +       N       S   + F      L  L P+ 
Sbjct: 97  YD--VAFVRNVTDIDDKILTKAAE------ANRPWWEWVSTYERAFSHAYDMLGVLPPSV 148

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-----NYGSFSRRKIDEQKMG 176
           +PRAT H+ QMI  +Q +I  G AY A   + FD ++       +YGS S   + + + G
Sbjct: 149 EPRATGHMTQMITYMQRLIDAGFAYPAQGSVYFDVAAWSAADGSDYGSLSGNNLIDMEQG 208

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               +   K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS+ YLG  FDIHGG
Sbjct: 209 ET--DNVGKRSPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTWYLGPEFDIHGG 266

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENEIAQ+  A      A  W+HN ++ + G KMSKS GN +++ E+++  +
Sbjct: 267 GLDLQFPHHENEIAQAHAAGDG--FARYWMHNHWVTIAGEKMSKSLGNVLSVPEIVKLVR 324

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKG 345
                     +R  +   HYR  ++++   L EA     +             Q     G
Sbjct: 325 -------PVELRYYLGSAHYRSVLEYSPDALQEAAQGYRRIESFVEKVDDLPGQPPVPVG 377

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEV 396
               A   A+ +D+    A+  +H   R       +              A   +LG + 
Sbjct: 378 EWTDAFAEAMNDDIGVPRALAEIHNTVRAGNSALAMRDYGEARRMAARVRAMTEVLGFDP 437

Query: 397 CKEHLNKNIS-------IAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDY 445
             +      S       +A++ LVQE    R I   +K + +AD +R +L   G I+ D 
Sbjct: 438 LSDQWQDGESVRFDAPMVALDALVQEELDRREIARSVKDWETADAVRDRLLEVGIIVTDT 497

Query: 446 KNPDNG 451
                 
Sbjct: 498 PEGPTW 503


>gi|242310378|ref|ZP_04809533.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522776|gb|EEQ62642.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 467

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 156/484 (32%), Positives = 251/484 (51%), Gaps = 49/484 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++KIY++++++  +F  I+P  +R+YVCGPTVYD +H+G+AR  IVFD+L R+LR    
Sbjct: 1   MQLKIYDSVQKEKVDFIPINPPEVRLYVCGPTVYDDSHLGHARSAIVFDLLRRVLRENGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V + +N TDIDDKII ++      +    +I+ IT    Q+++ +   L       +
Sbjct: 61  K--VYFAKNFTDIDDKIINKS------LQTGLSITEITKTYIQKYLDEMEALGVERADIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT  +  +  +IQ ++  G AY+  N +I    +    YGS S R + E ++ +R+  
Sbjct: 113 PKATESLESICEMIQELLDKGFAYQTPNGDIYLSVAKDSKYGSLSGR-VAELELQSRIHN 171

Query: 182 KYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGG 236
              K++  DF LWK      + G+ESP+G+GRPGWHIECSAM   +L        DIHGG
Sbjct: 172 SEQKRDSKDFALWKSYKGIGDIGYESPFGKGRPGWHIECSAMIKKHLAYSGQYAIDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENE +Q+ CA+  +  A  WIHNGF+ + G KM+KS GN   I + L    
Sbjct: 232 GADLLFPHHENEASQTRCAEN-QTIAKYWIHNGFVTINGEKMAKSLGNSFFIKDAL---- 286

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
              +++   ++R  +L THYR  ++F  + L  A+  L +  +             +   
Sbjct: 287 ---KNYDGEILRFYLLGTHYRAGLNFAEEDLLSAKKRLDRIYRIKKRIYPIQEADESQCN 343

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFNASAHILG 393
               A+L AL +DLN   A+  + +   ++ +  D             L I      + G
Sbjct: 344 EFKEAILEALNDDLNISKALSVVDEFINKANEFLDKKQKDKISSIAGFLAILERLLGVGG 403

Query: 394 ---IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
               E  +  +++     IE L+ +R    K K F+ AD IR++L S G  + D      
Sbjct: 404 KNPFEYFQLGVSEEQKQEIENLIAQRTEAKKQKDFAKADEIRERLHSMGIEIMDLPTKSV 463

Query: 451 GQRM 454
            +++
Sbjct: 464 WEKV 467


>gi|308232507|ref|ZP_07416271.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308369166|ref|ZP_07416800.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu002]
 gi|308378377|ref|ZP_07482373.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu009]
 gi|308213806|gb|EFO73205.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu001]
 gi|308328560|gb|EFP17411.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu002]
 gi|308352804|gb|EFP41655.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           SUMu009]
          Length = 463

 Score =  489 bits (1260), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/474 (31%), Positives = 230/474 (48%), Gaps = 46/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R L     + 
Sbjct: 1   MRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDI+DKI+ +A                 + + + F      L  L P+ +PR
Sbjct: 60  -VAFIRNVTDIEDKILAKAAA------AGRPWWEWAATHERAFTAAYDALDVLPPSAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V     
Sbjct: 113 ATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA--AG 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+FPH
Sbjct: 171 KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLVFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A      A  W+HNG++ + G KMSKS GN +++  +L+  +        
Sbjct: 231 HENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR-------P 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTS--KGIIDPAVLSAL 355
             +R  +   HYR  ++F+   + +A          L +      +   G   P    AL
Sbjct: 282 AELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFAEAL 341

Query: 356 YNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK--- 403
            +DL+   A+  +H +  E  +  D               A   ILG +   +       
Sbjct: 342 DDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWESRDE 401

Query: 404 ------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                  + + ++  +Q R    + + ++ AD IR +L+  G  + D  +    
Sbjct: 402 TSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTADGPQW 455


>gi|224418544|ref|ZP_03656550.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253826903|ref|ZP_04869788.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142072|ref|ZP_07804265.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510309|gb|EES88968.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131103|gb|EFR48720.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 467

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 155/483 (32%), Positives = 247/483 (51%), Gaps = 49/483 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++KIY++++++  +F  I+P  +R+YVCGPTVYD +H+G+AR  IVFD+L R+LR    
Sbjct: 1   MQLKIYDSIKKEKVDFFPINPPKVRLYVCGPTVYDDSHLGHARSAIVFDLLRRILRENGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V + +N TDIDDKII ++      +    +++ IT   TQ+++ +   L       +
Sbjct: 61  E--VLFAKNFTDIDDKIINKS------LQSGLSVAEITQTYTQKYLDEMAALGVERADIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT  +  +  +I+ ++  G AY+  N +I       P YGS S R + E +  +R+  
Sbjct: 113 PKATESLESICAMIEKLLEKGFAYQTPNGDIYLSVEKDPQYGSLSGR-VAELETQSRIQN 171

Query: 182 KYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGG 236
              K++  DF LWK      + G++SP+G+GRPGWHIECSAM   +L        DIHGG
Sbjct: 172 SEQKRDARDFALWKSYKGIGDIGYDSPFGKGRPGWHIECSAMIKKHLAYSGEYAIDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHENE +Q+ CAD  +  A  WIHNGF+ + G KM+KS GN   I + L    
Sbjct: 232 GADLLFPHHENEASQTRCADN-QTIAKYWIHNGFVTINGEKMAKSLGNSFFIKDAL---- 286

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
              +++   ++R  +L THYR  ++F  + L  A+  L +  +                 
Sbjct: 287 ---KNYDGEILRFYLLGTHYRAGLNFAEEDLLTAKKRLDRIYRLKKRIYPIQKIDEGECC 343

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------SAHILGIE- 395
               A L AL +DLN   A+  + +   ++ +  D      A            +LGI  
Sbjct: 344 EFREAFLEALNDDLNVSKALSVVDEFVAKANELLDKKQKDKAPMIAGNLVIIERLLGIGS 403

Query: 396 -----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  +++     IE L+ +R    K K ++ AD IR++L   G  + D      
Sbjct: 404 KNPFAYFQLGVSEEQKNEIETLIAKRNEAKKQKDYAEADKIREELRKMGIEIMDTFEGCV 463

Query: 451 GQR 453
            ++
Sbjct: 464 WEK 466


>gi|270284951|ref|ZP_06194345.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270288977|ref|ZP_06195279.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336349|ref|ZP_07224551.1| cysteinyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
          Length = 479

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 164/494 (33%), Positives = 244/494 (49%), Gaps = 61/494 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F   +   +++Y CGPTVYD+AHIGN R  +  D+L R+L +   
Sbjct: 5   MDLFLYNTLSREKERFLPSNDP-VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGY 63

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 64  --SVHHVMNITDVDDKTLAGARKK------GCSLEKYCQPYINAFFADLETLHILKADAY 115

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYGS S   ++E +  +R+  
Sbjct: 116 PHATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDA 175

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 176 DEYDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGG 235

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS    R +     W+H+  L ++G+KMSKS GNF T+ +LL+    
Sbjct: 236 VDNIFPHHENEIAQSESLSR-KPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQ---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             + +    +R  +L  HYR  ++FT + L  A   L +     +               
Sbjct: 291 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPE 348

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
                     A ++++ NDLN  SA+ +L    R+     D                   
Sbjct: 349 VGSACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQH 408

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +L +      +LG+    +    +I   +  LV+ER    K+K +  AD +R ++ S+GF
Sbjct: 409 ILSLLRQIDQVLGVLPFSQ---ADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGF 465

Query: 441 ILEDYKNPDNGQRM 454
            +ED K     +++
Sbjct: 466 AIEDGKTGMKVKKI 479


>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
 gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
          Length = 556

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 181/536 (33%), Positives = 261/536 (48%), Gaps = 102/536 (19%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ ++N+L ++   FQ      + MYVCG T YDF+HIG+AR  + FDVLYR L++   
Sbjct: 31  PQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 90

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D T L CL PT +
Sbjct: 91  E--VEYVRNFTDIDDKIIKRANER------GETVTSLSSRFINEFLLDMTELQCLPPTCE 142

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T HI  +I LI  I+ +  AY    ++ F   S P Y S S RK D+ + G RV   
Sbjct: 143 PRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFD 202

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIF
Sbjct: 203 TRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIF 262

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS  A    +    W+HNGF+N + +KM+KS+ NF TI ++          +
Sbjct: 263 PHHENELAQSRAAYPESE-VKCWMHNGFVNKDDKKMAKSDNNFFTIRDITAL-------Y 314

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT--------------EAEILLSKWPQTSTSKGIID 348
               +R  ++ THYR  ++ + Q L               + E +L+ + +   S  +  
Sbjct: 315 HPLALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISLSVPF 374

Query: 349 P----------AVLSALYNDLNTVSAIQALH-KLARESTKNHDLLP-------------- 383
                        L  + NDL T   +     +L +    + + L               
Sbjct: 375 EEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQ 434

Query: 384 ----------------------------IFNASAHILGI-------EVCKEHLNKNI--- 405
                                              ILG+       EV K+  +K +   
Sbjct: 435 QQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRA 494

Query: 406 ---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                 +++ +++R +  K K+F  +D IRK L +KG  L D          T W+
Sbjct: 495 GLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDE------PSGTVWR 544


>gi|15843193|ref|NP_338230.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|13883546|gb|AAK48044.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|323717774|gb|EGB26972.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
           CDC1551A]
          Length = 469

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 150/477 (31%), Positives = 231/477 (48%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDI+DKI+ +A                 + + + F      L  L P+ 
Sbjct: 64  YD--VAFIRNVTDIEDKILAKAAA------AGRPWWEWAATHERAFTAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V  
Sbjct: 116 EPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+
Sbjct: 175 -AGKRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN +++  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTS--KGIIDPAVL 352
                +R  +   HYR  ++F+   + +A          L +      +   G   P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
            AL +DL+   A+  +H +  E  +  D               A   ILG +   +    
Sbjct: 345 EALDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWES 404

Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + ++  +Q R    + + ++ AD IR +L+  G  + D       
Sbjct: 405 RDETSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTAEGPQW 461


>gi|333026131|ref|ZP_08454195.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332745983|gb|EGJ76424.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 466

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 161/484 (33%), Positives = 242/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  E--VVFVRNVTDIDDKIINKSAEQ------GRPWWAIGYENERAFNAAYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +MI +++ +I  GHAYE+   + FD  S P Y   S +++D   +      +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPGYLELSHQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIF
Sbjct: 172 TGKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQSKAY--GDEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + + EAE    +                     + PA 
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTELNGGEVAPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  LH   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++++R      K + +AD IR QL   G  +ED        
Sbjct: 403 TGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|161528475|ref|YP_001582301.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339776|gb|ABX12863.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 462

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 180/485 (37%), Positives = 256/485 (52%), Gaps = 59/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ +TL     E        +++Y+CG TVYD +HIG+AR +IVFDVL R L     E 
Sbjct: 1   MKLQDTLSNAEQELDT--SKKVKIYLCGVTVYDESHIGHARTIIVFDVLRRYLEDKGIE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +++N TD+DDKII RA+ E      N +   I++K  + + KD   L     T+ P+
Sbjct: 58  -IEFIQNFTDVDDKIINRAQAE------NTSAEAISTKYIENYFKDFDGLNVKHATNYPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I    AY + N + F  S  P YG  S++KIDE + G R+     
Sbjct: 111 ATEHIEDIIKFIEKLIEKEIAYVSKNGVYFAVSKFPEYGKLSKKKIDELESGARIEVDEA 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF +WK S  +EP W+SPWG+GRPGWHIECSAMS+ YLG+ FDIHGGG DLIFPH
Sbjct: 171 KNNPLDFAVWKFS-DVEPLWDSPWGKGRPGWHIECSAMSTKYLGENFDIHGGGRDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS       + A IW+H G + ++G KMSKS GN  +I  +LE       +W  
Sbjct: 230 HENEIAQSESFTG-NQFAKIWMHVGMVTIDGEKMSKSIGNIKSIKHVLE-------NWGP 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------- 350
            +IRL  L  HY +PID++ + L E    L+KW Q  T    +  A              
Sbjct: 282 NIIRLFCLSGHYSKPIDYSEELLKE---NLTKWRQAETCYYELIHANSENSEKVGSIVEK 338

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
                  AL +D+NT  A+ A  +L +E+ +              +   F     ILG+ 
Sbjct: 339 LGSEFDKALEDDVNTHLALSAFFQLVKEANRLAAEEKLGKEDAKIIKTEFLRMLKILGLN 398

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           + +  + + +   I+ +++ R    + K+F  AD IR +L      L D+K        T
Sbjct: 399 IPE--MTEGMKQEIDTMIENREKFRQEKQFQEADQIRDKLNEMNIELIDHKGK------T 450

Query: 456 RWKQK 460
            W +K
Sbjct: 451 IWMKK 455


>gi|11387154|sp|Q9RTT6|SYC_DEIRA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 498

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 159/501 (31%), Positives = 235/501 (46%), Gaps = 60/501 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I +Y+T++R+   F    P  + MY+CGPTVY  AH+G+A+  + FDV+ R L ++ 
Sbjct: 15  NPNITLYDTMQRQKVPFVPGTPGYVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRALTHFG 74

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACL 117
            +  V YV NITD+   + +    E                +  K    F +D   L  L
Sbjct: 75  YQ--VRYVSNITDVGHLLNDADEGEDKLQARARLEQLEPMEVADKYFWSFFRDMDALNVL 132

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+  PRAT HI + I LI+ +I  GHAYE+   + FD  S P YG  S RK+D+Q+ GT
Sbjct: 133 RPSINPRATGHIQEQIKLIEELIEKGHAYESAGSVYFDVRSWPEYGKLSGRKLDDQEEGT 192

Query: 178 RVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           R   +  K++P DF LWK++ P     W+SPW  G PGWHIECSAMS  YLG+ FDIHGG
Sbjct: 193 REAVRDEKRDPRDFALWKKAEPEHLMRWDSPWSVGFPGWHIECSAMSLKYLGEGFDIHGG 252

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHE     +         A  W+HN  L + G KMSKS GNF TI ++L    
Sbjct: 253 GLDLQFPHHE--AEIAQAEAAGHHFARYWMHNNMLTIGGEKMSKSKGNFTTIQDIL---- 306

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSK 344
              + +   V+R  ++ +HYR   +   +    A     +  +T            + S 
Sbjct: 307 ---KKYDPMVVRFLLVSSHYRSVTEMNEEAFASAANGYRRLSETLHEIERRLKDAPAGSD 363

Query: 345 GIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------- 389
             +D            A+ +D NT  A+ +L  L  E     +  P+   +         
Sbjct: 364 TALDSKIAARVTEFEDAMRDDFNTPKAVASLFGLTGELNTALNAGPVGRDTLERARDAYR 423

Query: 390 ----HILGIEVC-------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                +LG+           +     I   ++ +++ R      K+++ AD +R+ L   
Sbjct: 424 SLGGDVLGLFAETGSAASVAQDDASVIDALMDLVLKARQNYRLQKQYAEADELRETLGKA 483

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G  +ED K+        RWK+
Sbjct: 484 GITVEDTKD------GARWKR 498


>gi|260578396|ref|ZP_05846310.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase)(CysRS)
           [Corynebacterium jeikeium ATCC 43734]
 gi|258603418|gb|EEW16681.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase)(CysRS)
           [Corynebacterium jeikeium ATCC 43734]
          Length = 486

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 155/491 (31%), Positives = 241/491 (49%), Gaps = 63/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T  R++ +F+ I   +  +Y+CG TV    HIG+ R  + FD+L   L     + 
Sbjct: 11  LRIYDTAARQLRDFEPIREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLD- 69

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +       N       + + + F     +L    P+ +PR
Sbjct: 70  -VAFVRNVTDIDDKILTKAAEN------NRPWWEWAATHERAFNWAYDQLGVTPPSIEPR 122

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+PQMI  +Q II +GH Y A+  +    ++I NYG  S +K+DE   G        
Sbjct: 123 ATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPATIDNYGFLSGQKLDEMDQGESA--GTG 180

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG  FDIH GGLDL FPH
Sbjct: 181 KRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGSEFDIHCGGLDLQFPH 240

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+  A      A  W+HNG++ + G KMSKS GN ++I  +L+  +        
Sbjct: 241 HENEAAQATAAGDG--FARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR-------P 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDP-------- 349
             +R  +   HYR  ++++   L EA       E  L +  +  T +  +DP        
Sbjct: 292 VELRYYLGSAHYRSMLEYSEAALGEAAAGYRRIEKFLMRAIEYVTGETAVDPQALPVGEV 351

Query: 350 --AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHILGI 394
                  + +DL    ++  +H + RE  K  +  P                A A +LG+
Sbjct: 352 PAQFAEKMDDDLAVPQSLAVIHDIVREGNKLLEAKPTDEVKQQVKQIAGQVRAMAAVLGV 411

Query: 395 EVCKEHLNK--------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +   E   +               + + ++  ++ R      K +++AD +R +L   G 
Sbjct: 412 DPLSETWLESTKAAAGGSDVAMGALDVLVKAELERRAEARAAKDWATADEVRDRLAEAGI 471

Query: 441 ILEDYKNPDNG 451
            + D  +    
Sbjct: 472 EVTDTADGAKW 482


>gi|313680064|ref|YP_004057803.1| cysteinyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152779|gb|ADR36630.1| cysteinyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 482

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 161/494 (32%), Positives = 236/494 (47%), Gaps = 56/494 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+T++RK  EF    P ++ +YVCGPTVY  AH+G+ R  +V+DVL R L +      V
Sbjct: 5   LYDTMQRKKVEFVPATPGHVGIYVCGPTVYSDAHLGHGRAAVVYDVLRRWLMHEGY--RV 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V N+TD+     +    E                +  K   ++ +DT  L    P+  
Sbjct: 63  RFVSNVTDVGHLTDDADEGEDKIAKRAKLEKLEPMEVADKYFWRYFEDTDALNVAKPSIT 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRA+ HI + I L + ++  G+AYE N  + F  +  P+YG  S R++++Q+ G RV  +
Sbjct: 123 PRASGHIIEQIELTKELLERGYAYEVNGSVYFRAAKWPDYGKLSGRRLEDQQAGARVEVR 182

Query: 183 YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             K++P D+ LWKR+ P     W SPWG G PGWHIECSAMS  YLG+ FDIH GG+DL 
Sbjct: 183 GEKEDPRDWALWKRAEPGHLMRWPSPWGEGYPGWHIECSAMSLKYLGEGFDIHAGGIDLQ 242

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHE EIAQ+  A      A  W+H+  + L G KM+KS GNFIT+ ELLE  +     
Sbjct: 243 FPHHECEIAQAEAA--GHAFARYWMHHNHVLLNGEKMAKSTGNFITLRELLEKHE----- 295

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
               V+RL +L +HYR  +D T   L  A     +  +   S                  
Sbjct: 296 --PMVVRLYLLQSHYRSVLDLTDAGLEAAGRAYYRLLEAYRSLRSGLGRAREGTLTALEE 353

Query: 345 --GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG-IEVCKEHL 401
               ++ +   A+ +DL T  A+ AL     E  K         +    LG +E   E +
Sbjct: 354 AIDRLEGSFAEAMNDDLGTPEALAALFSFLPELNKALAAAQGRASLERALGTLERLGEGV 413

Query: 402 NKNISIAI-EKLVQ-------------ERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                  + E  ++             +R      + F +AD IR +L   G ++ED   
Sbjct: 414 LGLFPPRVLEARLEGPLLEGLIELLLEQREAARSRRDFPAADAIRARLGELGVVVEDT-- 471

Query: 448 PDNGQRMTRWKQKP 461
                  T+W+  P
Sbjct: 472 ----PHGTKWRLAP 481


>gi|318042057|ref|ZP_07974013.1| cysteinyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 489

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 173/508 (34%), Positives = 243/508 (47%), Gaps = 71/508 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ NTL R++ EF+ I+P  + +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MTLKLTNTLTRRVEEFRPIEPGKVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI+ RA +E        ++  ++ +N + FV D  RL  L     
Sbjct: 61  --AVTFVQNYTDIDDKILNRAAEE------GSSMEAVSERNIEAFVADMARLNILPADRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  +  +  LI  +   G AY A+ ++ F       YG  S R +++QK        
Sbjct: 113 PRATRSLDAIRALISELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLEQQKDNAAGRVA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 SEEEARKQHPFDFALWKGTKPGEPSFPSPWGAGRPGWHIECSAMVREELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   E  A+ W+HNG +N+ G+KMSKS GNF TI  LL++    
Sbjct: 233 DLVFPHHENEIAQSEAATGKE-LAHYWLHNGMVNVGGQKMSKSLGNFTTIRALLDS---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA---- 354
                   +RL  L  HYR+P+DFT + L  A              G I  A   A    
Sbjct: 288 --GVSPMTLRLFTLQAHYRKPLDFTAEALDAAATGWKGLNAALGLAGEIGAASNRATELP 345

Query: 355 -------------LYNDLNTVSAIQALHKLAR--------------------ESTKNHDL 381
                        + +DLNT +A+  L +LA+                     + +    
Sbjct: 346 SALAAARERFAAAMNDDLNTSAALAVLFELAKPLRSLANRLERGDASARSEASTPELAAQ 405

Query: 382 LPIFNASAHILGIE----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
             +    A +LG+                        IE  ++ R      + F++AD I
Sbjct: 406 AALLQELAGVLGLRHEAPDAAQPSGANAAATGLSDADIESQIEARKAAKAARDFAAADSI 465

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R+ L+++G  L D         +T W +
Sbjct: 466 REALKAQGIELIDKPGG-----VTEWLR 488


>gi|256397251|ref|YP_003118815.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|256363477|gb|ACU76974.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
          Length = 470

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 158/483 (32%), Positives = 234/483 (48%), Gaps = 51/483 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R   EF  + P  + +Y+CG TV    HIG+ R  + FD+  R L Y   
Sbjct: 1   MTLRLYDTAARATREFVPVTPGKVSIYLCGATVQAPPHIGHIRSGVSFDIARRWLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+VRN+TDIDDKII +A ++            +   N   F +    L C  P+ +
Sbjct: 61  --AVTFVRNVTDIDDKIIRKAAEQKVETWR------VAQANEYAFQQAYRLLGCEDPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+M+ ++  +I  GHAY A  ++ F   S+P YG+ +   +D+ +        
Sbjct: 113 PRATGHIPEMVAMMHKLIYDGHAYAAGGDVYFRVRSLPAYGALAHFSVDDLEEQPAEDVA 172

Query: 183 Y--HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              HK++P DF LWK S P EP W++PWG GRPGWH+ECSAM+  YLG  FDIHGGG+DL
Sbjct: 173 PTTHKEDPHDFALWKASKPGEPFWDTPWGPGRPGWHLECSAMAHRYLGTNFDIHGGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENE AQS      +K  N W+HNG++ L+  KMSKS GN + + EL        +
Sbjct: 233 IFPHHENEQAQSHAF--GDKFTNYWMHNGWVTLKNEKMSKSLGNSVLVTEL-------AK 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GIIDPA 350
            +   V+R  +   HYR  I++T   L EA+   S+     T              +  A
Sbjct: 284 QYRPVVMRYYLGTPHYRSMIEYTEDSLREADAAYSRIEGFVTRALETVGPTEAAARVPAA 343

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKE-- 399
              ++ +D     A+  L+   RE                L        ILG+    E  
Sbjct: 344 FAESMDDDFGVPGAVAVLYTTVREGNTALAGGDKEGVATHLASVLRMLDILGLNPLAEPW 403

Query: 400 -----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                       L   +   ++  +++R    + K ++++D IR +L   G  +ED  + 
Sbjct: 404 AGADGAAGSGTDLRPVVDALVKVALEQRQAARERKDYAASDAIRDRLSQAGVTVEDTPSG 463

Query: 449 DNG 451
              
Sbjct: 464 PRW 466


>gi|255530399|ref|YP_003090771.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
 gi|255343383|gb|ACU02709.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
          Length = 486

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 159/493 (32%), Positives = 228/493 (46%), Gaps = 46/493 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K + +YNTL R    F+ +   N+ MYVCGPTVY   H+GN R  I FD+++R L+Y 
Sbjct: 1   MDKGLHLYNTLTRTKELFEPLHAPNVGMYVCGPTVYSDVHLGNCRTFISFDLIFRYLKYS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      +R   +                I  K T  F         
Sbjct: 61  GYK--VRYVRNITDAGHLEGDRDEGDDKFAKRAKLEQLEPMEIVQKYTLGFHDVLRMFNT 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I +I+ I+ +G+AYEAN  + FD        NY   + R +++ 
Sbjct: 119 LPPSIEPTATGHIIEQIEMIKVIMDNGYAYEANGTVYFDVEKYSASYNYTILTNRNLEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+   DF LW ++ P     W SPWG G PGWHIECSAMS+ YLG+ F
Sbjct: 179 LANTRELGGQDEKRGRLDFALWIKAKPETIMRWPSPWGIGFPGWHIECSAMSAKYLGEEF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL   HH NEIAQS   +  +  A  W+H   L + G +MSKS GN     EL
Sbjct: 239 DIHGGGMDLAATHHTNEIAQSEACNHKQP-AKYWMHTNMLTVNGARMSKSAGNGFLPGEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                    R +    ++  ML  HYR  +DF+ + L  +E    +     T    + PA
Sbjct: 298 FTGDHPLLDRGYSPMTVKFFMLQAHYRSTLDFSNEALDASEKGFRRLMNAVTLLDKLVPA 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIF 385
                         + A+ +D N+   I  L +  R     +D            L  + 
Sbjct: 358 AESDFEIDPIASNCIRAMNDDFNSPVVIAELFEATRIINIVYDGKGKISVAELGKLKKLV 417

Query: 386 NAS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
                 I G++  +E  N  ++  +E ++  R    + K ++++D IR  L+S G  L+D
Sbjct: 418 KDFVFDIFGLK-DEEASNTELNDVLEMMIDIRKAAKENKDYATSDKIRVGLQSMGIQLKD 476

Query: 445 YKNPDNGQRMTRW 457
            K        T W
Sbjct: 477 SK------EGTTW 483


>gi|116495760|ref|YP_807494.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|301067316|ref|YP_003789339.1| cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116105910|gb|ABJ71052.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|300439723|gb|ADK19489.1| Cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 444

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 167/469 (35%), Positives = 240/469 (51%), Gaps = 61/469 (13%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVY++ HIGNAR  I FD + R   Y   +  VTYV N TD+DDKII  A    
Sbjct: 1   MYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYK--VTYVSNFTDVDDKIINAA---- 54

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 +A   +  +    F++DTT L     T  PRA+  IP +I  +Q++I   +AY 
Sbjct: 55  --HKTGEAPLDLAQRFIDAFMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAYA 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PEKYHKKNPADFILWKRSTPMEPG 203
            + ++ +      +YG  S + +DE + G        E   K++P DF LWK + P E  
Sbjct: 113 VDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEIS 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           WESPWG+GRPGWHIECS MS+  LG  FDIHGGG DL FPHHENEIAQS      ++   
Sbjct: 173 WESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEAKT-DKQFVR 231

Query: 264 IWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            W+HNGF+ +  +  KMSKS GNFIT++++ +T           V+R  M  T YR PI 
Sbjct: 232 YWMHNGFVTIGEDDEKMSKSLGNFITVHDIRKTV-------DPQVLRFFMAGTQYRMPIR 284

Query: 322 FTVQRLTEAEILLSKW-------------------PQTSTSKGIIDPAVLSALYNDLNTV 362
           ++   L  A   L++                    PQ +     +    ++A+ +D+N  
Sbjct: 285 YSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQITKQLQTLKDRFVTAMDDDINVQ 344

Query: 363 SAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           + +  L  LA+   +            +DLL  ++A   I G+    +   K++   I+ 
Sbjct: 345 NGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAWLQIFGVVFADQ---KSLDADIDA 401

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           LV+ R      K F+ +D IR QL ++G ILED        + TRW+++
Sbjct: 402 LVKARDAARAAKDFAKSDQIRDQLAAQGIILEDT------PQGTRWRRQ 444


>gi|163786101|ref|ZP_02180549.1| cysteinyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
 gi|159877961|gb|EDP72017.1| cysteinyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
          Length = 493

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 159/487 (32%), Positives = 223/487 (45%), Gaps = 41/487 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + IKIYNTL  +   F  I   ++ MYVCGPTVY   H+GN R  + FD+++R   +  
Sbjct: 6   SQHIKIYNTLSGEKELFVPITEGHVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYFNHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D  +   +    +         I  + T  F         L
Sbjct: 66  YK--VRYVRNITDAGHLENDDDVGEDKITKKARLEAIEPMEIVQRYTVDFHNVLNTFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQK 174
            P+ +P AT HI + I LI++II  G AY  N  + FD         YG  S+RK+++  
Sbjct: 124 PPSIEPTATGHIIEQIELIESIIDKGFAYVVNGSVYFDVHKYNESNAYGILSKRKLEDLI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  KKNP DF LWK++ P     W SPW  G PGWH+EC+AMS+ YLG+ FD
Sbjct: 184 HNTRTLDGQSDKKNPQDFALWKKAEPAHIMRWPSPWSDGFPGWHLECTAMSTKYLGEYFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+  A   +     W+H   L L G +MSKS+GN+I   ELL
Sbjct: 244 IHGGGMDLKFPHHECEIAQNQAAKGQDP-VKYWMHANMLELNGARMSKSSGNYINPAELL 302

Query: 293 ETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
                   + +   VIR  M+   Y+  +D T   L  AE   ++               
Sbjct: 303 SGNNDKMSKGYNPMVIRFFMMQASYKSVLDLTDAGLKAAEKGFNRLMDAINLIDNLKTSD 362

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNA--- 387
             S    +       A+ +D NT   I  L   A+   +  D         L        
Sbjct: 363 SSSFDISVWKQKCYDAMNDDFNTPILIAHLFDAAKFINQIKDGSATVTSEDLDFLKQTIE 422

Query: 388 --SAHILGIEV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             +  ILG+      +     ++ A+E L+  R      K F+ +D IR +L   G  L 
Sbjct: 423 TFTFDILGLTNVSKDDSNTDKLTGAVEILINLRKEARLNKDFALSDKIRDELAEAGIQLN 482

Query: 444 DYKNPDN 450
           D ++   
Sbjct: 483 DSRDGTT 489


>gi|317507827|ref|ZP_07965528.1| tRNA synthetase class I catalytic domain-containing protein
           [Segniliparus rugosus ATCC BAA-974]
 gi|316253869|gb|EFV13238.1| tRNA synthetase class I catalytic domain-containing protein
           [Segniliparus rugosus ATCC BAA-974]
          Length = 477

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 151/475 (31%), Positives = 232/475 (48%), Gaps = 45/475 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + EF  +    + +Y+CG TV    H+G+ R  +VFDVL R L+    
Sbjct: 1   MTLRLYDTRTRVVREFHPLREGQVSIYLCGATVQGRPHVGHLRSAVVFDVLRRWLQAKGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V + RN+TDIDDKI+ +A +               + + + F     RL  L P+ +
Sbjct: 61  D--VLFARNVTDIDDKILVKAAE------AGRPWWEWAATHERAFASAYDRLGVLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QM+  I+ +I  GHAY    ++ FD  S+P YG  S  ++D+   G    E 
Sbjct: 113 PRATGHITQMVDCIERLIERGHAYTGAGDVYFDVRSLPEYGKLSGHQLDDVHQGESAAE- 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W +PWG GRPGWH+EC+AM++ YLG  FDIH GG+DL+F
Sbjct: 172 -GKRDPRDFTLWKGAKPGEPWWPTPWGPGRPGWHLECTAMATTYLGSEFDIHCGGMDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQ+  A   +  A  W+HNG+L+L G KMSKS GN +++ ELL   +      
Sbjct: 231 PHHENELAQARGA--GDSFARFWLHNGWLSLGGEKMSKSLGNVLSLEELLTAVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
               +R  +   HYR   +F+ + + EA +   +               + G +     S
Sbjct: 283 -PQELRYYLGCAHYRSTQEFSFEAVIEAAVAYKRLESFVLRAADEYGEIALGEVTGDFAS 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHLNK-- 403
           AL +DL    A+  L + A++                    A   +LG +          
Sbjct: 342 ALDDDLAVPKALAELQRHAKQGNTELAERKPGAAATAASVRAMLAVLGCDPFDPIWASGR 401

Query: 404 -------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                   + + +E  +  R      K +++AD +R +L   G  + D  +    
Sbjct: 402 EEKAALVALDVLVEAELSRREAARADKDWATADEVRDRLRKAGIDVTDGPDGPKW 456


>gi|302520121|ref|ZP_07272463.1| cysteinyl-tRNA synthetase [Streptomyces sp. SPB78]
 gi|302429016|gb|EFL00832.1| cysteinyl-tRNA synthetase [Streptomyces sp. SPB78]
          Length = 466

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 161/484 (33%), Positives = 242/484 (50%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  E--VVFVRNVTDIDDKIINKSAEQ------GRPWWAIGYENERAFNAAYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +MI +++ +I  GHAYE+   + FD  S P Y   S +++D   +      +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPGYLELSHQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIF
Sbjct: 172 TGKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQSKAY--GDEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + + EAE    +                     + PA 
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRVEGFVQRVTELNGGEVAPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  LH   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++++R      K + +AD IR QL   G  +ED        
Sbjct: 403 TGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|239916923|ref|YP_002956481.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414621|ref|ZP_06246363.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|259511838|sp|C5C8X5|SYC_MICLC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|239838130|gb|ACS29927.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 485

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 163/491 (33%), Positives = 242/491 (49%), Gaps = 56/491 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           + Y+T   +I +F+ + P    +Y CG TV    H+G+ R  IVFD+L R L        
Sbjct: 4   RFYDTRTAQIRDFEPLVPGEASVYYCGATVQGMPHVGHVRSAIVFDILIRWLEATGL--R 61

Query: 66  VTYVRNITDIDDKIIERARQEHPS-------IPINDAISIITSKNTQQFVKDTTRLACLA 118
           VT VRN+TDIDDKI++R+   H +        P  +    +  +  + F      L    
Sbjct: 62  VTSVRNVTDIDDKILDRSAASHEAGFEASDLYPAREPWWALAYRFEKAFDAAYLALGVRR 121

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT H+P+M  LI+ ++  GHAY A     ++ FD  S   YG  +R+++++ + 
Sbjct: 122 PTYEPRATGHVPEMFALIERLMERGHAYPAQDGSGDVYFDVRSWERYGELTRQRVEDMQD 181

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK + P EP    WESPWG GRPGWH+ECSAMS+ YLG  FD
Sbjct: 182 APDADPR-GKRDPHDFALWKGAKPGEPATAVWESPWGAGRPGWHLECSAMSTKYLGAEFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A      A  W+HNG +   G KMSKS GN I+  E+L
Sbjct: 241 IHGGGLDLRFPHHENELAQSAAAGDG--FARFWLHNGLVTYGGEKMSKSVGNTISPEEML 298

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDP 349
              +          +R  +   HYR  +D+    L EAE ++ +   +   + + G + P
Sbjct: 299 GMAR-------PTAVRYFLGQAHYRSQLDYRPGALDEAEAVVERIEGFTARARAAGAVPP 351

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
                       A  +A+ +DLN   A+ ALH+  R                 L    A 
Sbjct: 352 APDGALADRVPAAFRTAMEDDLNVPQALAALHEAVRAGNSALAGQDLDAAAARLAEVEAM 411

Query: 389 AHILGIEVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             +LG++   E  +         +   +   ++ R      K +++AD IR  L + G +
Sbjct: 412 TAVLGLDDVPEGDDAAAGPVSDALDSLVRSQIEARAQARADKDWATADRIRDALAAAGVV 471

Query: 442 LEDYKNPDNGQ 452
           +ED  +    +
Sbjct: 472 VEDGADGATWR 482


>gi|89054449|ref|YP_509900.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|109894905|sp|Q28QY7|SYC_JANSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88863998|gb|ABD54875.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 453

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 183/456 (40%), Positives = 258/456 (56%), Gaps = 17/456 (3%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I + N+  RK+   Q I+P  + +Y+CGPTVYD AH+GNAR  +VFD L+RLLR+ YG 
Sbjct: 3   EIHLKNSKSRKVELLQPIEPGRVSLYLCGPTVYDRAHLGNARSAVVFDQLFRLLRHVYGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VT+VRN TD+DDKI  RA  E         I+ +T++ +Q ++ DT  L  L P H P
Sbjct: 63  ENVTFVRNFTDVDDKINARALAE------GREIADLTAETSQWYLDDTRALGVLDPNHMP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT +I +M+  I+++I  G AY  +   +F   S  +YG  S R +D+   G RV    
Sbjct: 117 RATEYIAEMVAFIEDLIAKGFAYARDGHALFRVRSFDDYGKLSGRSVDDMIAGARVEVAP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAM+   LG+ FDIHGGG DL+FP
Sbjct: 177 YKEDPMDFVLWKPSSDDIPGWDSPWGRGRPGWHIECSAMAHALLGEQFDIHGGGADLMFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQSC A      ANIW+HN  L +EG+KMSKS GNF T+ +LL+      +  P
Sbjct: 237 HHENEVAQSCAAGHG--FANIWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 288

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYNDLN 360
             VIR  ML THY +P+D+T ++  EAE  L KW      S ++    P ++ +L +DLN
Sbjct: 289 GEVIRFVMLSTHYGKPMDWTEKKRAEAEATLRKWYAALRQSVAEQEATPHLVDSLADDLN 348

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T  AI  LH +            +         +    E    +++    +    R   +
Sbjct: 349 TALAITTLHGMYETGNFGPLAGGLRLLGLWSGTVPDWSEIAEVDLTYFAGRFSSARAEAM 408

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             K F+  D ++  L + G  +   K+         
Sbjct: 409 VTKDFTDVDALKSALTAAGVEVRMSKDGVELVPGPT 444


>gi|119718240|ref|YP_925205.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|166225302|sp|A1SNY3|SYC_NOCSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119538901|gb|ABL83518.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 471

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 162/483 (33%), Positives = 239/483 (49%), Gaps = 55/483 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++Y+T  R++ +F  ++     +YVCG TV    H+G+ R  + FDVL R LR+   +  
Sbjct: 4   RLYDTATREVRDFVPLEEGKAGLYVCGLTVQSEPHVGHVRSGVNFDVLQRWLRHLGYD-- 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VT++RN+TDIDDKI+ ++ ++        A   +  +  +Q  +    L    PT++P A
Sbjct: 62  VTFIRNVTDIDDKILVKSAEQGL------AWYQLAYRMKRQLDRAYDDLNVAPPTYEPAA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           T H+P+MI LIQ +I  GHAY A     ++ FD  S P YG  +R+ ID+ +       +
Sbjct: 116 TGHVPEMIVLIQELIAKGHAYAAEDGSGDVYFDVRSWPQYGELTRQGIDDMEAAEDADPR 175

Query: 183 YHKKNPADFILWKR-STPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             K++P DF LWK      EP    W SPWG GRPGWHIECSAM+  YLG  FDIHGGG+
Sbjct: 176 -GKRDPRDFALWKGWKKDSEPETAAWPSPWGPGRPGWHIECSAMAGKYLGPAFDIHGGGV 234

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A  W+HN ++   G KMSKS GN +TI  +L      
Sbjct: 235 DLRFPHHENEQAQSRAA--GRPFATYWMHNAWITTAGEKMSKSLGNSLTIPAVL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------DP 349
            + +    +R  ++  HYR  ++F+ + L EA     +          +           
Sbjct: 287 -QKYRGIELRYYLVAAHYRSHVEFSFEALDEAATGFRRIENFLDRAADVLGGIGGGIACA 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK-- 398
             L+A+ +DL T +A+ A+H++ RE  K                  A   +LG++     
Sbjct: 346 DFLNAMNDDLGTPAAVAAIHEVVREGNKLLAAGDSPALRGNAASVVAMLDVLGLDPADPA 405

Query: 399 ----------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                     E L   +   +  L+ +R      + F SAD IR +L + G  LED  + 
Sbjct: 406 WSSPGGGRTAERLETVVEGLVSDLLTQREKARADRDFVSADAIRDRLHAVGVQLEDTPDG 465

Query: 449 DNG 451
              
Sbjct: 466 PKW 468


>gi|288923576|ref|ZP_06417688.1| cysteinyl-tRNA synthetase [Frankia sp. EUN1f]
 gi|288345075|gb|EFC79492.1| cysteinyl-tRNA synthetase [Frankia sp. EUN1f]
          Length = 493

 Score =  488 bits (1256), Expect = e-135,   Method: Composition-based stats.
 Identities = 151/507 (29%), Positives = 230/507 (45%), Gaps = 75/507 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R++  F  + P ++ +YVCGPTV    H+G+ R  + FD+L R L     
Sbjct: 1   MGLRLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTGLAFDLLRRWLTQSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N+TDIDDKII  A Q          +  + ++ T+ F +    +  L PT  
Sbjct: 61  --SVTFVQNVTDIDDKIIINADQ------AGTTVWELATRQTRAFDEAYRAVGVLPPTIS 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT HIP+M+ +I  ++  G AY     + F   +  +YG+ S ++     M      +
Sbjct: 113 PLATGHIPEMLEMISVLVERGFAYPGAGSVWFRVGAFADYGALSHQR--PASMHPSPEAE 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK   P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAVKPGEPSWSSPWGPGRPGWHLECSAMAGKYLGGVFDIHGGGLDLVF 230

Query: 243 PHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           PHHENE AQ+ CA       + AN W+H G L   G KMSKS GN   + + L   +   
Sbjct: 231 PHHENERAQTVCAAGGPAGGEMANYWMHIGLLTTGGTKMSKSLGNSFFVTDALAAVR--- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------- 338
                 V+R  +L  HYR  ++++ Q L E+     +                       
Sbjct: 288 ----PQVLRYHLLSAHYRSSLEYSPQTLDESGAAHDRVETFVRNALDILGGPAEAAALAG 343

Query: 339 --------------QTSTSKGIIDP-----AVLSALYNDLNTVSAIQALHKLARESTKNH 379
                           + ++G + P        +A+ +DL    A+ AL        +  
Sbjct: 344 TEAGLAGSVGPGTVAGAAAEGDLTPELVWSEFAAAMDDDLAIGRALAALFGAVSRGNQVL 403

Query: 380 DLL---------PIFNASAHILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKK 424
                        +      +LG++  ++       L   +   +  L+  R      + 
Sbjct: 404 SKAHSRELAGWVEVTRRMLTVLGLDPVEQWPTAGAELRPALDSVMGILLDLRSSARARRD 463

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNG 451
           ++ AD IR +L + G ++ED       
Sbjct: 464 YTEADSIRSRLAASGVVIEDTPEGQRW 490


>gi|326332066|ref|ZP_08198351.1| cysteine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
 gi|325950204|gb|EGD42259.1| cysteine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
          Length = 469

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 158/482 (32%), Positives = 237/482 (49%), Gaps = 53/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++  R++ +F  + P    +YVCG TV    H+G+ R  + FDVL R LR    E 
Sbjct: 3   LRLYDSATREVRDFTPLQPGKASLYVCGLTVQSEPHVGHVRSGVNFDVLQRWLRASGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             T++RN+TDIDDKI+ ++  +            +     ++       L    PT++P 
Sbjct: 62  -TTFIRNVTDIDDKILAKSADQGRPWYN------LAYDMHRELDAAYASLNVARPTYEPL 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           AT HIP++I LI+ +I  GHAY A +   ++ FD  S P YG  S +K+D+ +       
Sbjct: 115 ATGHIPEIIALIEELIAKGHAYAAEDGSADVYFDVRSWPAYGELSGQKVDDMEAAADADP 174

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF LWK     EP    W SPWG GRPGWHIECSAM+  YLG  FD HGGGL
Sbjct: 175 R-GKRDPRDFALWKGRKVSEPETASWPSPWGLGRPGWHIECSAMAGKYLGPAFDFHGGGL 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A+ W+HN ++   G KMSKS GN + I E+L      
Sbjct: 234 DLRFPHHENEQAQSRAA--GRPFASYWLHNAWITTSGEKMSKSLGNSLVIPEVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIID 348
            +      +R  ++  HYR  ++F+ + L EA     +                + G+  
Sbjct: 286 -KKVRGIELRYYLVAAHYRSHVEFSFEALDEAAAGFQRIEGFLDRAASVIGEIPADGVPS 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEV--- 396
              ++A+ +DL T +A+ ALH++ RE  K            +     A   ILG++    
Sbjct: 345 TDFVAAMDDDLGTPAAVAALHEVVREGNKLLADGDSPALRGVATSVRAMLDILGLDPADP 404

Query: 397 -------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                    E L   + + +  ++ ER      K ++ AD +R +L+  G  +ED     
Sbjct: 405 SWGPESGADEKLTGALDVLVRGVLDERAEARAAKDWARADAMRDRLKDAGIEIEDTPEGP 464

Query: 450 NG 451
             
Sbjct: 465 KW 466


>gi|229819277|ref|YP_002880803.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
 gi|259511825|sp|C5BYT3|SYC_BEUC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|229565190|gb|ACQ79041.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
          Length = 474

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 163/497 (32%), Positives = 248/497 (49%), Gaps = 64/497 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y++  R + +F+ ++P  + +Y+CG TV    H+G+ R +I FDVL R LR    
Sbjct: 1   MTLRLYDSATRAVRDFEPLEPGKVGIYLCGATVQGEPHVGHLRSVIAFDVLVRWLRRSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT +RN+TDIDDKI+ ++ +                ++ + F      +  L PT++
Sbjct: 61  D--VTMIRNVTDIDDKILAKSAEAGVPWW------AWAYRHERAFSDAYDAVGNLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+ +MI L+Q ++  G+AY   +  + FD  S+ +YGS +R+K++     T   E
Sbjct: 113 PRATGHVVEMIELMQRLVDRGNAYRGKDGNVWFDVRSLADYGSLTRQKLENM--STLEEE 170

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K +P DF LWK   P +P    WE+P+GRGRPGWH+ECSAM+  YLG+ FDIHGGG+
Sbjct: 171 SSDKADPHDFALWKGLKPGDPETASWETPFGRGRPGWHLECSAMAYRYLGETFDIHGGGI 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A  W+HN ++   G KMSKS GN++T  E L      
Sbjct: 231 DLRFPHHENEQAQSHAAGYG--FARYWLHNAWVTAGGEKMSKSLGNYLTAAEALGRV--- 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
               PA V+R A+   HYR  ++FT   L EA +   +     T                
Sbjct: 286 ----PAVVLRYALASVHYRSSVEFTEATLAEARVTWERIAGFVTRAAELTGPVGDDGAAR 341

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHIL 392
                +  A + A+ +DLN  +A+  LH+  R         E+      L        +L
Sbjct: 342 LADVVLPIAFVEAMDDDLNVSAALAVLHEHIRLGNTALSSGEAGDAAAELSAVRGMLDVL 401

Query: 393 GIEVCKE---------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           G++   E          L   + + +E ++ +R      K ++ AD +R QL + G ++E
Sbjct: 402 GLDPLAEPWVGEASATPLRGAVDVLVEGVLADRSAARAAKDWARADALRDQLAAAGVVVE 461

Query: 444 DYKNPDNGQRMTRWKQK 460
           D           RW  K
Sbjct: 462 DS------PSGARWTIK 472


>gi|194476516|ref|YP_002048695.1| cysteinyl-tRNA synthetase [Paulinella chromatophora]
 gi|171191523|gb|ACB42485.1| cysteinyl-tRNA synthetase [Paulinella chromatophora]
          Length = 510

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 175/527 (33%), Positives = 240/527 (45%), Gaps = 92/527 (17%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K  NTL R++  F  I    I +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MSLKFTNTLTRQLESFTPIKDRKISIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+V+N TDIDDKI+ RA +E        ++ +++ +N + F  D   L  L     
Sbjct: 61  E--VTFVQNFTDIDDKILVRAARE------ESSMQLVSDRNIEAFKSDMALLNILPADRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  +  +  +I ++   G AY    ++ F       YG  S + + + + G      
Sbjct: 113 PRATKCLDGIRSIISDLEKKGVAYSTEGDVYFSIKEYAQYGKLSGKDLSKLQEGASGRIS 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  KKN  DF LWK++   EP + SPWG GRPGWHIECS M    LG+  DIH GG 
Sbjct: 173 ASEEVRKKNSFDFALWKKAKIDEPSFTSPWGLGRPGWHIECSTMVREELGETIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A+  +  AN W+HNG +N+ G+KMSKS GNF TI ELL +    
Sbjct: 233 DLIFPHHENEIAQSEMANG-KNLANYWLHNGMVNVNGQKMSKSLGNFTTIRELLAS---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------------- 335
                   +RL +L THYR+P+DF  + L  A I  +                       
Sbjct: 288 --GISPLALRLFVLQTHYRKPLDFNSEALKAASIGWANLNIALSLGERFKKNLQWDLGEF 345

Query: 336 ---------------------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR- 373
                                K  +      +     ++A+  DLNT +AI  L KLA+ 
Sbjct: 346 TKLYVLLMNKEDESSQKKLKPKLIEIMDPLKLAYQNFITAMDEDLNTSAAIAILFKLAKP 405

Query: 374 -----------ESTKNHDLLPIFNA----------SAHILGIEVCK--EHLNKNISIAIE 410
                      E   ++    +F             A ILG+   +  E      S  I 
Sbjct: 406 LRSLSNRLERGEIINSNSKTVLFEELQCQWQLLIGLASILGLRAERLGEKHTSLSSNDIT 465

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
             ++ R      K F +AD IR  L+ KG  L D         +T W
Sbjct: 466 VQIKLRNESKAKKDFLTADRIRDFLKDKGIELIDKPG-----NITEW 507


>gi|325283376|ref|YP_004255917.1| cysteinyl-tRNA synthetase [Deinococcus proteolyticus MRP]
 gi|324315185|gb|ADY26300.1| cysteinyl-tRNA synthetase [Deinococcus proteolyticus MRP]
          Length = 489

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 160/496 (32%), Positives = 238/496 (47%), Gaps = 58/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +Y+T++R+   F+   P ++ MY+CGPTVY  AH+G+A+  + FDV+ R   ++  + 
Sbjct: 11  IHLYDTMQRQKVRFEPSTPGHVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRTFLHFGYK- 69

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V YV NITD+    +D      +    +         +  K    F KD   L  L P+
Sbjct: 70  -VRYVANITDVGHLQNDSDDGEDKMLARARLEQLEPMEVADKYFWSFFKDMDALNVLRPS 128

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PRAT HI + I LI+ +I  GHAYE+N  + FD  S P YG  S RK+D+Q+ GTR  
Sbjct: 129 INPRATGHIQEQIKLIEELIEKGHAYESNGSVYFDVRSWPEYGKLSGRKLDDQEEGTREA 188

Query: 181 EKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +  K++P DF LWK + P     W+SPWG G PGWHIECSAMS  YLG+ FDIHGGGLD
Sbjct: 189 VREEKRDPRDFALWKNAEPEHIMRWDSPWGVGFPGWHIECSAMSLKYLGEGFDIHGGGLD 248

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHE     +         A  W+HN  L + G KMSKS GNF TI ++L       
Sbjct: 249 LQFPHHE--AEIAQAEAAGHHFARYWMHNNMLTIGGEKMSKSKGNFTTIQDIL------- 299

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSKGII 347
           + +   V+R  ++ +HYR   +   +    A     +   T            + +   +
Sbjct: 300 QRYDPMVVRFLLVSSHYRSVTEMNDEAFASAANGYRRLVDTLAEIERRLNDAPAGADAAL 359

Query: 348 D-------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
           D            A+ +D NT  A+ AL+ L  E     +   +   +            
Sbjct: 360 DAKIAARVQEFEDAMRDDFNTPKAVAALYGLTTEMNTALNAGAVGRETLEQARNAYRTLG 419

Query: 390 -HILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
             +LG+     +   +     +   +E +++ R      K+++ AD +R  L + G  +E
Sbjct: 420 GDVLGLFAGNGQAATQDDAPVVDRLMEIVLKARQNYRLQKQYAEADELRDTLGAVGITVE 479

Query: 444 DYKNPDNGQRMTRWKQ 459
           D K+        RWK+
Sbjct: 480 DTKD------GARWKR 489


>gi|15618841|ref|NP_225127.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
 gi|15836465|ref|NP_300989.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae J138]
 gi|16752101|ref|NP_445468.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|6831686|sp|Q9Z6X4|SYC_CHLPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4377255|gb|AAD19070.1| Cysteinyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
 gi|7189843|gb|AAF38714.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
 gi|8979306|dbj|BAA99140.1| cysteinyl tRNA synthetase [Chlamydophila pneumoniae J138]
          Length = 474

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 163/493 (33%), Positives = 240/493 (48%), Gaps = 60/493 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +  YNT  +K   F     + +R+Y CGPTVYD+AHIGN R  +  D+L R L ++  
Sbjct: 7   EGLYFYNTASQKKELFFPNH-TPVRLYTCGPTVYDYAHIGNFRTYVFEDILKRTLVFFGY 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V NITD++DK I  A ++      N  +   T   T+ F +D   L        
Sbjct: 66  --SVTHVMNITDVEDKTIAGASKK------NIPLQEYTQPYTEAFFEDLDTLNIARADFY 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-P 180
           P AT++IPQMI  I  ++  G AY   +  + F  +  PNYG  S   +   +  +R+  
Sbjct: 118 PHATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISA 177

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K+NP+DF+LWK   P   G   WESP+G+GRPGWH+ECS M+   LG   DIH GG
Sbjct: 178 DEYDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGG 237

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +  A  W+H+  L ++G+KMSKS GNF+T+ +LL     
Sbjct: 238 VDNIFPHHENEIAQSEALSG-KPFARYWLHSEHLLIDGKKMSKSLGNFLTLRDLL----- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             + +    +R  +L +HYR  ++FT + L      L +     +    +D         
Sbjct: 292 -HQEFTGQEVRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPR 350

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                     A   AL NDLN  +   +L     E     D           +L      
Sbjct: 351 TLDSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKV 410

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+      +   I   + +LV ER    K K ++ AD +R ++ + GF++ED K+ 
Sbjct: 411 DTVLGVLPLTTSVC--IPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDSKSG 468

Query: 449 DNGQRMTRWKQKP 461
                    K KP
Sbjct: 469 P--------KVKP 473


>gi|326317611|ref|YP_004235283.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374447|gb|ADX46716.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 459

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 166/393 (42%), Positives = 221/393 (56%), Gaps = 31/393 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL R + EF  ++P ++RMYVCG T+YD  HIG+AR M+ FDV+ R LR    
Sbjct: 1   MSLRIYNTLSRAMEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNITDIDDKII RA      +     I  +T + T    +D   LA   PT +
Sbjct: 61  --RVTYVRNITDIDDKIIRRA------VERGITIRQLTDEMTAAMHEDIGALAIEPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT ++PQM+ LI  +   G AY A   ++ +       YG  S + +DE + G RV  
Sbjct: 113 PRATEYVPQMLSLIDTLERKGLAYRAGSGDVNYAVRRFEGYGKLSGKSLDELRAGERVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF+LWK + P EP    W+SP+G GRPGWHIECSAMS   LG+ FDIHGGG 
Sbjct: 173 QDDKQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS  A   +  A  W+HNGF+ ++  KMSKS GNF TI E+L      
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPA--- 350
            +   A  +R  ++ THYR P++++   L +A   L +             G ID A   
Sbjct: 286 -QQVDAETLRFFIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGAIDWADPH 344

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD 380
                +A+  D  T  A+  L +LA E  +   
Sbjct: 345 AARFKAAMDEDFGTPEAVAVLFELAGEVNRTRS 377


>gi|238618570|ref|YP_002913395.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238379639|gb|ACR40727.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 470

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 171/487 (35%), Positives = 251/487 (51%), Gaps = 54/487 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII+++R              I +  T+ ++   ++L      
Sbjct: 61  GY--TVIRVQNITDIDDKIIKKSRDTGKDWN------EIVNYYTKDYLDMLSQLKVKI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 --VKEKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKG 345
           + W   V+R   L +HYR PIDF+ + L +A+  L +               P+      
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 346 IID---------PAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
            I           +  +A+ ND +T +A+  +H++           R+           +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               + G+   + +     +   I+ +V  R  L +MK +  +D IR++L   G  + D 
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 462 KDKSTWR 468


>gi|257457848|ref|ZP_05623007.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257444561|gb|EEV19645.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 487

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 167/501 (33%), Positives = 245/501 (48%), Gaps = 59/501 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL  KI +F  +DP  +  Y CGPTVY++AHIGN R  +  D L RLLR+   
Sbjct: 1   MSLRIYNTLGHKIEDFVPVDPGKVGFYGCGPTVYNYAHIGNLRAYVFQDTLSRLLRFLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
              VT+V NITDI     +    E   +        ++  I    T+ F KDT RL    
Sbjct: 61  --PVTHVMNITDIGHLSGDADDGEDKMVKTAKERGQSVLEIADFYTKAFFKDTERLNIRR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P    +AT+H+  MI LI+ I  +GH Y A   + +D  + P YG  +  K+++ K G R
Sbjct: 119 PDVVCKATDHVQDMIELIKRIEANGHTYSAGGNLYYDIMTFPKYGELASIKLEDLKAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           +    +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+ FDIH 
Sbjct: 179 IEVDENKRNPHDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGEQFDIHT 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIAQS  A   +K    W+HN FL +   KMSKS G+FIT+++++E  
Sbjct: 239 GGIDHIRIHHTNEIAQSEGATG-KKWVKYWLHNEFLVMNKGKMSKSTGDFITLDKVIEA- 296

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIID-- 348
                 +     R  +L  HYR  + F+ + +  A+       Q      + +K + D  
Sbjct: 297 -----GYAPLDYRFLLLGGHYRTQLTFSWEAMETAKNARKNLEQRIANLLAEAKTLPDFP 351

Query: 349 ----------------------PAVLSALYNDLNTVSAIQALHKLARES-TKNHDLLPIF 385
                                    + AL  D++T  A+  L +  ++   +  + + + 
Sbjct: 352 SGNVTAEQAEQLLHTEKARCYLADFVQALEEDISTPRALSVLQQAVKDKELEAAEAITLI 411

Query: 386 NASAHILGIEVCKEH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
                +L + + +E         + + +  IE+LV ER    K K F  AD IR  L+++
Sbjct: 412 RIFDAVLALRLIEEAEALHTGGESVDNAEEIERLVAERTEAKKNKDFKRADEIRNILKNR 471

Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
           G  LED          T W++
Sbjct: 472 GIALEDTAT------GTLWRK 486


>gi|116328522|ref|YP_798242.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331250|ref|YP_800968.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122281004|sp|Q04SB0|SYC_LEPBJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|122283690|sp|Q050D6|SYC_LEPBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116121266|gb|ABJ79309.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116124939|gb|ABJ76210.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 474

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 162/492 (32%), Positives = 237/492 (48%), Gaps = 55/492 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+ YN+L  K  +F   +P  + +Y CGPTVY+FAHIGN R  +  DVL R L+     
Sbjct: 3   EIQFYNSLSGKKEKFSPANPHRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +T   NITDIDDKII  +      I    +I   T+  T+ F +D   ++     H P
Sbjct: 63  VDMT--MNITDIDDKIIRDS------IASQKSIQEFTTPWTEAFFEDLKTVSAEFLEHYP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           +AT  IP+MI +IQ +   G  YE +  + F       YG  S+      K GTR   ++
Sbjct: 115 KATESIPEMIQIIQRLQNQGLVYEKDENLYFSIQKFEGYGKLSKIDTSGMKTGTRYDTDE 174

Query: 183 YHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           Y K++  DF+LWK      E  W++  G GRPGWH+ECSAM     G   DIH GG+DL+
Sbjct: 175 YDKEDVRDFVLWKSPKRKGEASWKTSVGTGRPGWHLECSAMIRKIYGSGVDIHTGGVDLL 234

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A   E     W+H+  L +EG+KMSKS GNF T+ +L+      G+ 
Sbjct: 235 FPHHENEIAQSEGAFPEESFVRTWLHSEHLLVEGQKMSKSKGNFYTLRDLV------GQG 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTSKGI-------- 346
                IR  ++  HYR  ++F+  R+ EA          L +    + +  I        
Sbjct: 289 LDPKAIRFLLISAHYRSKLNFSTDRIAEASANIRKIQNCLDRLLDIAQNVKIDPSYSFND 348

Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLPIFNAS 388
                       +L +DLN   A+  + +  +                  ++ + I    
Sbjct: 349 ELTLRWKKEFEESLADDLNVSKALAVVFESLKTINAFLDSKKNRVAEISANEFIQILAYY 408

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             I G+   +   +  I   I+ L+QER    K K F+ +D IR QL ++G ++ED K+ 
Sbjct: 409 DRIFGVLNFESQKDPLIDSEIDSLIQERQTARKNKDFARSDAIRDQLLAQGILIEDTKDG 468

Query: 449 DNGQRMTRWKQK 460
                  RW++K
Sbjct: 469 I------RWRRK 474


>gi|33242297|ref|NP_877238.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
 gi|33236808|gb|AAP98895.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
          Length = 474

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 162/493 (32%), Positives = 240/493 (48%), Gaps = 60/493 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +  YNT  +K   F     + +R+Y CGPTVYD+AHIGN R  +  D+L R L ++  
Sbjct: 7   EGLYFYNTASQKKELFFPNH-TPVRLYTCGPTVYDYAHIGNFRTYVFEDILKRTLVFFGY 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V NITD++DK I  A ++      N  +   T   T+ F +D   L        
Sbjct: 66  --SVTHVMNITDVEDKTIAGASKK------NIPLQEYTQPYTEAFFEDLDTLNIARADFY 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-P 180
           P AT++IPQMI  I  ++  G AY   +  + F  +  PNYG  S   +   +  +R+  
Sbjct: 118 PHATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISA 177

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K+NP+DF+LWK   P   G   WESP+G+GRPGWH+ECS M+   LG   DIH GG
Sbjct: 178 DEYDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGG 237

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +  A  W+H+  L ++G+KMSKS GNF+T+ +LL     
Sbjct: 238 VDNIFPHHENEIAQSEALSG-KPFARYWLHSEHLLIDGKKMSKSLGNFLTLRDLL----- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             + +    +R  +L +HYR  ++FT + L      L +     +    +D         
Sbjct: 292 -HQEFTGQEVRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPR 350

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                     A   AL NDLN  +   +L     E     D           +L      
Sbjct: 351 TLDSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKV 410

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+      +   I   + +LV ER    K K ++ AD +R ++ + GF++ED K+ 
Sbjct: 411 DTVLGVLPLTTSVC--IPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDSKSG 468

Query: 449 DNGQRMTRWKQKP 461
                    + KP
Sbjct: 469 P--------RVKP 473


>gi|318058498|ref|ZP_07977221.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318079336|ref|ZP_07986668.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actF]
          Length = 466

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 160/484 (33%), Positives = 241/484 (49%), Gaps = 48/484 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN+TDIDDKII ++ ++            I  +N + F      L CL PT++
Sbjct: 61  E--VVFVRNVTDIDDKIINKSAEQ------GRPWWAIGYENERAFNAAYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +MI +++ +I  GHAYE+   + FD  S   Y   S +++D   +      +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFLEYLELSHQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIF
Sbjct: 172 TGKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      ++ A  W+HN ++ + G KMSKS GN + ++E++       + W
Sbjct: 232 PHHENEIAQSKAY--GDEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + + EAE    +                     + PA 
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTELNGGEVAPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  LH   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                 E L+  +   +  ++++R      K + +AD IR QL   G  +ED        
Sbjct: 403 TGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRWT 462

Query: 453 RMTR 456
              R
Sbjct: 463 LGPR 466


>gi|260772517|ref|ZP_05881433.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611656|gb|EEX36859.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 397

 Score =  487 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 150/417 (35%), Positives = 220/417 (52%), Gaps = 45/417 (10%)

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           +RNITDIDDKII+RA +        ++   +T +  Q+   D   L  L P  +PRAT +
Sbjct: 1   MRNITDIDDKIIKRASENQ------ESCDSLTERLIQEMYTDFDALNILRPDVEPRATAY 54

Query: 129 IPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           I ++I L++ +I  G AY A+  +++F+ S    YG  S++ + + + G RV  +  K++
Sbjct: 55  IEEIIALVERLIDRGFAYVADNGDVMFEVSKFKEYGRLSKQDLTQLQAGARVDIETAKRS 114

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
           P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FPHHEN
Sbjct: 115 PLDFVLWKMSKPGEPTWQSPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHEN 174

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           EIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++L       + +    +
Sbjct: 175 EIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHYDPETV 226

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSALYND 358
           R  ++  HYR  ++++ + LT+A   L +         +   A           SA+ +D
Sbjct: 227 RYFLMSGHYRSQLNYSEENLTQARASLERLYTALRGLDMTVAAAGGEEYVSRFTSAMNDD 286

Query: 359 LNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH-------LNK 403
            NT  A   L  +ARE  +           L  +    A ++GI   +          N 
Sbjct: 287 FNTPEAYSVLFDMAREVNRLKTEDMLQASALGALMRELADVIGILYQEPERFLQSSVAND 346

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           + +  IE L++ R      K +++AD  R +L   G ILED      G   T W++K
Sbjct: 347 DQAEEIEALIKLRNDSRANKDWANADLARHKLTEMGIILED------GPNGTTWRRK 397


>gi|42523767|ref|NP_969147.1| hypothetical protein Bd2317 [Bdellovibrio bacteriovorus HD100]
 gi|61216207|sp|Q6MKR7|SYC_BDEBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39575974|emb|CAE80140.1| cysS [Bdellovibrio bacteriovorus HD100]
          Length = 482

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/494 (31%), Positives = 235/494 (47%), Gaps = 62/494 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+  +++ +F  + P  ++MYVCGPTVY+F H+GN R  +VF+++   L +   + 
Sbjct: 2   LKIHNSQSKQLEDFTPLTPGQVKMYVCGPTVYNFLHVGNFRGPVVFNMVRNWLEHLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY  N TD+DDKII RA +      +  + + ++ K   ++ KD   L        P+
Sbjct: 61  -VTYALNFTDVDDKIINRANE------LGMSPTELSEKYIAEYKKDFASLGLRPHDMNPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T H+  +  ++++++    AYEA  ++++   S  +YG  S R  D+   G RV     
Sbjct: 114 VTEHMDDIRSMVESLVSQKKAYEAQGDVLYSIESFKDYGKLSGRNTDDLLAGARVEVDEK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK + P E  W SPWG GRPGWHIECSAM  +  G   DIHGGG+DLIFPH
Sbjct: 174 KRNPMDFALWKAAKPGEVSWPSPWGPGRPGWHIECSAMIKNLFGDQIDIHGGGMDLIFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      +     W+HN  LN  G+KMSKS GN +T+ E LE        + A
Sbjct: 234 HENEIAQSEGCTG-KAFVKYWMHNNMLNFGGQKMSKSLGNIVTMREFLEM-------YNA 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
            + +  +L  HYR   DF  + +  A   LS+     +                      
Sbjct: 286 EIYKWMILSAHYRTLSDFGDEAVERAVGGLSRVYSALSMAESYLTPEVTQEDAAFAKITQ 345

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST-------------------------KNHD 380
                V  A+ +D  T  A  A+ ++ R+                           K   
Sbjct: 346 DAWKKVEEAMNHDFGTPDAFAAMFEVVRQFNAQVRRGMKANPAIQGKALAFHNFVRKMGS 405

Query: 381 LLPIFNASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           ++ +F   AH   I++    L K      A++ LV ER      K F+ +D +R ++ + 
Sbjct: 406 MMSLFQEPAHAFLIKLDDMLLKKMNLERSAVDALVAERGEARAAKDFAKSDELRAKITAL 465

Query: 439 GFILEDYKNPDNGQ 452
           G  + D       +
Sbjct: 466 GISVSDTPEGSFWE 479


>gi|126728611|ref|ZP_01744426.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
 gi|126710541|gb|EBA09592.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
          Length = 511

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 203/493 (41%), Positives = 267/493 (54%), Gaps = 52/493 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I++ NT  R    F  IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG 
Sbjct: 10  EIRLTNTRNRAKEVFVPIDPENVRMYVCGPTVYDRAHLGNARPVLVFDVLYRLLRHVYGA 69

Query: 64  KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             VTYVRN TD+DDKI   A   ++      + D I   T +    ++KD   L  L P 
Sbjct: 70  DHVTYVRNFTDVDDKINATALARKEAGADGTLEDLIRERTEETISWYLKDMGELGALEPD 129

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PRAT +I  M+ +I+ +I  GHAY A   ++F   S   YG  S R +D+   G RV 
Sbjct: 130 RMPRATEYIAPMVAMIEGLIESGHAYAAEGHVLFRVRSYEAYGKLSGRSVDDMMAGARVE 189

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK S+   PGW+SPWGRGRPGWHIECSAMS    G  FDIHGGG DL
Sbjct: 190 VAPYKEDPMDFVLWKPSSDELPGWDSPWGRGRPGWHIECSAMSYELFGSSFDIHGGGNDL 249

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQSCCA      A +W+HN  L +EGRKMSKS GNF T+ +LL+      +
Sbjct: 250 MFPHHENEIAQSCCAHPEGDFAKVWMHNEMLQVEGRKMSKSLGNFFTVRDLLD------Q 303

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------IDPAVLS 353
             P  VIR  ML THYR+P+D+T ++  EA+  L+ W       G+        D  V+S
Sbjct: 304 GVPGEVIRFVMLSTHYRKPMDWTAEKAREAKRKLAYWRALLKEAGVEGVDSTAADLGVVS 363

Query: 354 ALYNDLNTVSAIQAL--------HKLARESTK-------------NHDLLPIFNASAHIL 392
            L  DLNT  A+  L          L  E  +             + +L     +SA++L
Sbjct: 364 DLAEDLNTKPALDKLGSIADYLKSALVSEKQRSSGDLNVPESSENSAELAKRLKSSANLL 423

Query: 393 GI------EVCKEHLNKNISIAIEKLVQERLILL-------KMKK--FSSADYIRKQLES 437
           G+      +  ++ +  ++S    KLV  R   L         KK  F   D  +  L +
Sbjct: 424 GLLQDELADWFEDQVFFDLSDFSSKLVNLRAEALAKVQEPGADKKECFRELDRFKSALLN 483

Query: 438 KGFILEDYKNPDN 450
            G  +   K    
Sbjct: 484 AGVEVRMSKAGVE 496


>gi|269302721|gb|ACZ32821.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
          Length = 474

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 162/493 (32%), Positives = 239/493 (48%), Gaps = 60/493 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +  YNT  +K   F     + +R+Y CGPTVYD+AHIGN R  +  D+L R L ++  
Sbjct: 7   EGLYFYNTASQKKELFFPNH-TPVRLYTCGPTVYDYAHIGNFRTYVFEDILKRTLVFFGY 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V NITD++DK I  A ++      N  +   T   T+ F +D   L        
Sbjct: 66  --SVTHVMNITDVEDKTIAGASKK------NIPLQEYTQPYTEAFFEDLDTLNIAKADFY 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-P 180
           P AT++IPQMI  I  ++  G AY   +  + F  +  PNYG  S   +   +  +R+  
Sbjct: 118 PHATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISA 177

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K+NP+DF+LWK   P   G   WESP+G+GRPGWH+ECS M+   LG   DIH GG
Sbjct: 178 DEYDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGG 237

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++G+KMSKS GNF+T+ +LL     
Sbjct: 238 VDNIFPHHENEIAQSEALSG-KPFVRYWLHSEHLLIDGKKMSKSLGNFLTLRDLL----- 291

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             + +    +R  +L +HYR  ++FT + L      L +     +    +D         
Sbjct: 292 -HQGFTGQEVRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPR 350

Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
                     A   AL NDLN  +   +L     E     D           +L      
Sbjct: 351 TLDSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKV 410

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+      +   I   + +LV ER    K K ++ AD +R ++ + GF++ED K+ 
Sbjct: 411 DTVLGVLPLTTSVC--IPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDSKSG 468

Query: 449 DNGQRMTRWKQKP 461
                    K KP
Sbjct: 469 P--------KVKP 473


>gi|229577911|ref|YP_002836309.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284996496|ref|YP_003418263.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|228008625|gb|ACP44387.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284444391|gb|ADB85893.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 470

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 251/487 (51%), Gaps = 54/487 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++              I +  T+ ++   ++L      
Sbjct: 61  GY--TVIRVQNITDIDDKIIKKSQDTGKDWN------EIVNYYTKDYLDMLSQLKVKI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 --VKEKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKG 345
           + W   V+R   L +HYR PIDF+ + L +A+  L +               P+      
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 346 IID---------PAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
            I           +  +A+ ND +T +A+  +H++           R+           +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               + G+   + +     +   I+ +V  R  L +MK +  +D IR++L   G  + D 
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 462 KDKSTWR 468


>gi|284161561|ref|YP_003400184.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011558|gb|ADB57511.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 474

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 170/492 (34%), Positives = 243/492 (49%), Gaps = 65/492 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++YNTL +++ E +      +RMYVCG T YD++HIG+AR  + FDVL R L Y   E
Sbjct: 5   PVRLYNTLTKEMEELKL--DKTVRMYVCGITAYDYSHIGHARTFVFFDVLRRYLEYEGHE 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N TD+DDKI+ RA  E            I  K   +F+KD + L    P + P
Sbjct: 63  --VIYVQNFTDVDDKIVRRAVNE------GKTQKEIAEKFISEFLKDMSALNVKMPDYMP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           + T+HI  ++  +Q +I  G+AYE  N    ++ F   +  +YG  S   ++E     R+
Sbjct: 115 KVTDHIQDIVQAVQKLIELGYAYEVENEHGKDVYFHVPAFESYGKLSGMSLEELNRH-RI 173

Query: 180 PEKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
                K++  DF LWK +   +      ++SPWG GRPGWHIECS MS+ YLG  FDIHG
Sbjct: 174 EPNPKKRDVKDFALWKSAKEDDFKAKAVFDSPWGYGRPGWHIECSVMSAKYLGVPFDIHG 233

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHENE AQS     +E     WIH  F+ ++G KMSKS GN + I ++L   
Sbjct: 234 GGKDLIFPHHENERAQSYALFGVEP-VRYWIHCDFVMIKGEKMSKSLGNIVKIRDVLNV- 291

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
                 +   V+R  +L   YR P+D++ + L  A+   +    T  +  +         
Sbjct: 292 ------YGGEVLRYFLLTAFYRSPLDYSEKSLERAKNSYNYLKNTLINLDMEISALKSYG 345

Query: 347 -------IDP-----AVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIF 385
                   DP        SA+ + +NT  A+   H  A+   KN               F
Sbjct: 346 EDRKDMGFDPSSFLKEFESAM-DIMNTPKALAVFHSFAKAINKNLYDMSLKELESCFETF 404

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
              + +LG+    E +       IE LV+ER +  K K F  AD IR++L  KG +L D 
Sbjct: 405 MTFSKVLGLFENYERIPTLPKELIE-LVKEREVARKEKDFERADKIREKLREKGIMLIDT 463

Query: 446 KNPDNGQRMTRW 457
                  + TRW
Sbjct: 464 ------PKGTRW 469


>gi|317404801|gb|EFV85180.1| CysS protein [Achromobacter xylosoxidans C54]
          Length = 484

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 171/496 (34%), Positives = 245/496 (49%), Gaps = 55/496 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL R    F+      +RMYVCG TVYDF H+G+AR ++ FDV+ R LR      
Sbjct: 2   LQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASGL-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L   +P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEFYIAAMHADERALGVASPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY+A+  ++ +       YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGKLEQKGLAYQADDGDVNYAVRGFEGYGKLSGKTLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK +   EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKEEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQ+  A      ANIW+H G L ++  KMSKS GNF TI + +   +    
Sbjct: 234 KFPHHENEIAQTEGAFGG-TLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQGEPAAD 292

Query: 301 SWP-------APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
           +         A ++R  ++  HYR P ++T   L +A+  L +  Q   +    D     
Sbjct: 293 TADYRVNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVPADDQGIDW 352

Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKNH--------------------DLLP 383
                 A  +A+ +D N+  A+ AL +LA E+ +                      D   
Sbjct: 353 NEPQAQAFKAAMDDDFNSSGAVAALFELASEANRGKSARSAGQLKALGGLLGLLQQDPAA 412

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            F +S       + +    +  + AI+ L+  R      + F+ AD IR +L   G  L+
Sbjct: 413 YFQSSTRYSAAGMEQGARAELDAAAIQALIDARAAAKAARDFAQADRIRAELREAGIELD 472

Query: 444 DYKNPDNGQRMTRWKQ 459
           D         +T+W++
Sbjct: 473 DKPGG-----LTQWRR 483


>gi|296392881|ref|YP_003657765.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296180028|gb|ADG96934.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 467

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 154/481 (32%), Positives = 234/481 (48%), Gaps = 47/481 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + EF  + P  + +Y+CG TV    H+G+ R  +VFDVL R L     
Sbjct: 1   MTLRLYDTRTRVVREFAPLRPGQVSVYLCGATVQGKPHVGHLRSAVVFDVLRRWLLAKGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V ++RN+TDIDDKI+ +A +               + + ++F     RL  L P+ +
Sbjct: 61  D--VLFIRNVTDIDDKILAKAAE------AGRPWWEWAATHEREFSNAYNRLGVLPPSAE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI QM   I+ +I  GHAY    ++ FD  S+P YG  S  + D+   G      
Sbjct: 113 PRATGHITQMTTCIERLIERGHAYTGAGDVYFDVRSLPEYGKLSGHQPDDVHQGESA--G 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK S P EP W +PWG GRPGWH+EC+AM++ YLG  FDIH GG+DL+F
Sbjct: 171 AGKRDPRDFTLWKGSKPGEPWWPTPWGPGRPGWHLECTAMATAYLGSEFDIHCGGMDLVF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQ+  A   ++ A  W+HNG+L+L G KMSKS GN +++ ELL   +      
Sbjct: 231 PHHENELAQAHGA--GDQFARFWLHNGWLSLGGEKMSKSLGNVLSLEELLTAVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
               +R  +   HYR   +F+++ + EA +   +                 G +     S
Sbjct: 283 -PQELRYYLGCAHYRSTQEFSIEAVVEAAVAYQRLESFVLRAAEQFGEIPVGQVADEFAS 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGIEVCKEHLNK-- 403
           AL +DL    A+  L + A++                    A   +LG +          
Sbjct: 342 ALDDDLAVPKALAELQRQAKQGNTELADADPAAAATAASVRAMLAVLGCDPFDPMWASGR 401

Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                     + + +E  +  R      K +++AD +R +L   G I+ D  +       
Sbjct: 402 EREEKAAFRAVDVLVEAELSRREAARAGKDWATADDVRDRLRKAGIIVTDGPDGPKWSLE 461

Query: 455 T 455
           T
Sbjct: 462 T 462


>gi|300780461|ref|ZP_07090317.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300534571|gb|EFK55630.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 473

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 144/481 (29%), Positives = 232/481 (48%), Gaps = 54/481 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T  R +  F+     ++ +Y+CG T     HIG+ R  + FD++ R          
Sbjct: 4   QIFDTATRTLRAFEPFRDGHVSIYLCGATPQSSPHIGHLRSGVAFDIVRRWFAA--NGND 61

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +VRN+TDIDDKI+ +A +               S   ++F +    L  L P+ +PRA
Sbjct: 62  VAFVRNVTDIDDKILTKAAEHDRPWW------EWVSTYEREFSRAYETLGVLPPSVEPRA 115

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKIDEQKMGTRVPE 181
           T H+ QM+  +Q ++ +G+AY A+  + FD ++      +YGS S  ++++ + G    +
Sbjct: 116 TGHVTQMVDYMQRLMDNGYAYAADGSVYFDVAAWVAAGGDYGSLSGNRVEDMEQGET--D 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+   DF LWK + P EP W +PWG GRPGWH+ECSAMS+ YLG+ FDIHGGGLDL 
Sbjct: 174 NRGKRGAHDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTWYLGESFDIHGGGLDLK 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS  A      A  W+HN ++ + G KMSKS GN ++I+ +LE  +     
Sbjct: 234 FPHHENEQAQSHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSIDRMLEAVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLS 353
                +R  +   HYR  ++++ + L EA +   +     T    + P        A   
Sbjct: 287 --PVELRYYLGSAHYRSVLEYSPEALQEAAVAYRRIEDLITRASALAPVEPGQWTDAFAD 344

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH---- 400
           A+  D +   A+  +H   R + K            L     A A +LG++  +      
Sbjct: 345 AMNEDFSVPRALAEIHNTVRAANKALAAGDTDEATRLAGAVRAMAGVLGVDPVEWAGRAG 404

Query: 401 ----------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                     + + + + +   +  R      K +++AD +R +L   G  + D  +   
Sbjct: 405 AGSDSADTARVTEALDVLVRAELDRRAEARAAKDWATADAVRDRLTEAGIEVTDTADGAQ 464

Query: 451 G 451
            
Sbjct: 465 W 465


>gi|313676536|ref|YP_004054532.1| cysteinyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
 gi|312943234|gb|ADR22424.1| cysteinyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
          Length = 495

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 159/497 (31%), Positives = 228/497 (45%), Gaps = 52/497 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K++KI N+L R+   F+ I+P  + MYVCGPTVY  AH+GN R  + FDV+ R LR+ 
Sbjct: 1   MDKELKIQNSLTRQKEIFKPINPPFVGMYVCGPTVYSDAHMGNVRTFMSFDVINRYLRHL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+    DD      +    +   N     I  +    F +       
Sbjct: 61  GYK--VRYVRNITDVGHLVDDADDGEDKIGKKAKLENVEPMEIVQRYANGFHRVMDLFNI 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P  +P AT HI + I + + ++ +G AYE N  I FD S       YG  S RKI++ 
Sbjct: 119 LEPDIEPTATGHIVEQIEINKKLLENGWAYEKNGSIYFDVSKYNEAHEYGILSGRKIEDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           +  TR    +  KKNP DF LWK+++      W SPW  G PGWH+EC+ MS+ YLG+ F
Sbjct: 179 QSNTRTLDGQDDKKNPLDFALWKKASDEHIMRWPSPWSDGFPGWHLECTVMSTKYLGETF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHE EIAQ+  A+      N WIH   L + G+KMSKS GN     +L
Sbjct: 239 DIHGGGMDLKFPHHECEIAQAVGANGKTP-VNYWIHTNMLTVNGQKMSKSLGNSFLPTQL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------- 337
           +        + +    +R  M+ THY   +DF+ + L  A+    +              
Sbjct: 298 VSGNHDMLEQGYTPMTVRFFMMQTHYSSTLDFSNEALKAAQKGYRRLANGLKIIKSLVFK 357

Query: 338 -------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--- 387
                   +  +           ++ +D NT   I  L +L ++    H     F     
Sbjct: 358 NDDGRKNEKAISQIEQACEGCYKSMNDDFNTAKTIAQLFELLKKINSLHTGQLKFGEIGQ 417

Query: 388 -------------SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                           ILG+   KE     +   I+ L++        K +   D IR  
Sbjct: 418 DAFENLSNTYQTFMVEILGL---KEETPTEVDPIIDALLEFYKKAKAEKNYDQVDEIRTI 474

Query: 435 LESKGFILEDYKNPDNG 451
           L+S   I++D K   + 
Sbjct: 475 LKSNKLIIKDLKTGVDW 491


>gi|15241557|ref|NP_198699.1| tRNA synthetase class I (C) family protein [Arabidopsis thaliana]
 gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
 gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 511

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 180/518 (34%), Positives = 254/518 (49%), Gaps = 83/518 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++K+YNT+ ++      I P  I +YVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 5   KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHL- 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  VT+VRN TD+DDKII+RA +        +    ++++   +++ D   L CL PTH
Sbjct: 64  -DYDVTFVRNFTDVDDKIIDRANKN------GEDPLDLSNRFCDEYLVDMGALQCLPPTH 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR + H+  +I +I+ II     Y    ++ F     PNYG  S + ++  + G RV  
Sbjct: 117 QPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS HYL   FDIHGGG DL 
Sbjct: 177 DSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLK 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG + +   KM+KS  NF TI E+         S
Sbjct: 237 FPHHENEIAQTCAA-CEDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITA-------S 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
           +    +R  ++   YR P+ FT  +L  +   L    QT                     
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGK 348

Query: 347 -------------IDPAVLSALYNDLNTV--------SAI----QALHKLARESTKNH-- 379
                        +     S + +DLNT          A+     +L KL +   K    
Sbjct: 349 SEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMS 408

Query: 380 ------DLLPIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILL 420
                 ++         +LG+       E+ KE   K +         I +L++ER+   
Sbjct: 409 MLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITAR 468

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           K K F+ +D IR++L  KG  L D        + T W+
Sbjct: 469 KNKDFAKSDEIREKLTRKGIALMDI------GKETVWR 500


>gi|296166635|ref|ZP_06849062.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295898007|gb|EFG77586.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 469

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 152/477 (31%), Positives = 228/477 (47%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A         +       +   + F      L  L P+ 
Sbjct: 64  CD--VAFIRNVTDIDDKILNKAAA------ADRPWWEWAATYERAFSAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QM+ L++ +I  GHAY A  ++ FD  S P YG  S  KID+   G  V  
Sbjct: 116 EPRATGHITQMVELMERLIETGHAYPAGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+
Sbjct: 175 -TCKRDQRDFTLWKAAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGPEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  LL+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPALLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVL 352
                +R  +   HYR  ++F+   L +A              +        G   P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSDNALQDAVKAYVGVEEFLHRVRVRVGGVEPGEWTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN- 402
            AL +DL   +A+  +H    E  +  D               A   ILG +   E    
Sbjct: 345 EALDDDLAVPAALAEVHHARAEGNRALDSGDHDGALQHARAIRAMMGILGCDPLDERWET 404

Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + +   ++ R    + + ++ AD IR +L+  G  + D  +    
Sbjct: 405 RDETSAALAAVEVLVRAELENREKAREQRNWALADEIRDRLKIAGIEVTDTADGPQW 461


>gi|220911630|ref|YP_002486939.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|254765174|sp|B8HCR7|SYC_ARTCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|219858508|gb|ACL38850.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 488

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 166/495 (33%), Positives = 236/495 (47%), Gaps = 58/495 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T   ++  F  +      +Y CG TV    H+G+ R  I FD L R L +   
Sbjct: 1   MTLRFYDTASAEVRNFVPLVAGRASLYYCGATVQGMPHVGHIRSAIAFDQLTRWLTHRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              VT VRN+TDIDDKI+ ++        Q  P     +    +  +  Q+F+K    L 
Sbjct: 61  --RVTVVRNVTDIDDKILAKSEASFASGFQPEPGEIPGEEWWALAYRYEQEFLKAYDALG 118

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDE 172
              PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ ID+
Sbjct: 119 VSRPTYEPRATGHIPEMHALIQQLIDRGHAYPALDDSGDVYFDVRSWSKYGALTRQNIDD 178

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
            +       +  K++P DF LWK S   EP    W SPWG GRPGWH+ECSAM + YLG 
Sbjct: 179 MQAAADADPR-GKRDPRDFALWKGSKEGEPATASWASPWGAGRPGWHLECSAMVTKYLGT 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  EG KMSKS GN I+  
Sbjct: 238 EFDIHGGGLDLRFPHHENEMAQSQAA--GHPFANFWMHNGMVTYEGEKMSKSIGNTISPA 295

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTS 341
           E+LE            V+R  +   HYR  +D+    L EA   + +          +  
Sbjct: 296 EMLELA-------SPRVVRYYLGQAHYRSILDYRPTSLQEAAAAVERIDGFLAKAVARFG 348

Query: 342 TSKGIID----------PAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLL 382
           T  G ++           A  +A+ +DLN   A+ ALH+  R                 +
Sbjct: 349 TDFGFVEGDYGPSTGAVEAFYAAMDDDLNVPRALAALHETVRAGNTALADGDDDSARKAM 408

Query: 383 PIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                   +LG+      E       + +++ +E  +  R      K +S++D IR  L 
Sbjct: 409 NAVVIMTDVLGLNAVAGSEKTSTREAEALAVLVEAQLAARATARAEKDWSASDAIRDTLN 468

Query: 437 SKGFILEDYKNPDNG 451
             G ++ED  +    
Sbjct: 469 EAGVVVEDGADGPTW 483


>gi|124514778|gb|EAY56290.1| Cysteinyl-tRNA synthetase, class Ia [Leptospirillum rubarum]
          Length = 490

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 174/481 (36%), Positives = 239/481 (49%), Gaps = 45/481 (9%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           NTL +K        P  + MYVCG TVYD  H+G+AR   VFD+L+           V Y
Sbjct: 21  NTLTQKTEPLSPRIPGEVTMYVCGVTVYDDCHLGHARSQTVFDLLH--RLLLRLGYRVRY 78

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           VRNITDIDDKII +A++          I+ IT      F +D  RL  L P  +PRAT +
Sbjct: 79  VRNITDIDDKIIRKAQE------TGRTITEITDIYIDSFQRDMGRLGVLPPNKEPRATLY 132

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           +  MI LI  ++  G AY+  N++ F      +YG  S +K+DE + G R+     K++P
Sbjct: 133 LEPMIRLIGTLLDKGFAYKKGNDVYFRVRKYQSYGELSHQKLDELQAGARIVADEEKEDP 192

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            DF LWK +   EP + + +G GRPGWHIECSAMS   LG+  DIHGGG+DL+FPHHENE
Sbjct: 193 LDFALWKGAKIGEPSYPAFFGEGRPGWHIECSAMSLSELGETIDIHGGGMDLMFPHHENE 252

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
            AQS CA   ++   IWIHNGF+ L   KMSKS GN   I    ET  F         +R
Sbjct: 253 RAQSECATG-KRFVGIWIHNGFVTLNEEKMSKSLGNIFRIRTFFETSPF-PEGVTREWLR 310

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSALYNDL 359
             +L THY  P+D T + L  A+  L                  +G +    LSAL  D+
Sbjct: 311 AFLLSTHYGSPVDLTDENLAHAKNALDSLYLFKDRLDSVLGEVREGQMTREFLSALCRDM 370

Query: 360 NTVSAIQALHKLAREST------------KNHDLLPIFNASAHILGIEVCKEH------- 400
           +T  A + LH+                  +  D+  +F  +   LGI             
Sbjct: 371 DTPVAFRVLHEAKNSLNPVLGSGGSLKEERLSDVRALFEVAKSTLGILTLPASEWVYGKG 430

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                    +   +++LV ER    + K ++ AD IR++L+  G++LED  NP    R+ 
Sbjct: 431 EKTGREESLLPEEVDRLVLEREKARREKDYARADGIRERLKKAGYLLED--NPGGLPRIR 488

Query: 456 R 456
           +
Sbjct: 489 K 489


>gi|237752694|ref|ZP_04583174.1| cysteinyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376183|gb|EEO26274.1| cysteinyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 467

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 164/484 (33%), Positives = 254/484 (52%), Gaps = 51/484 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY++ +++   F+ I P+ +R+YVCGPTVYD +H+G+AR  IVFD+L R+L     + 
Sbjct: 1   MKIYDSHKKEKVPFEPIIPNEVRLYVCGPTVYDDSHLGHARSAIVFDLLRRVLIENGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TDIDDKII +A         N +I  IT   T++++ +   L  +    +P+
Sbjct: 60  -VIFAKNFTDIDDKIINKA------TQNNCSIEEITQTYTKRYLDEMQALGVMRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  M  +IQN++    AY+  N ++    S    YG+ S R I E +  +RV    
Sbjct: 113 ATENLEAMFAMIQNLLDKKIAYQTPNGDVYLSVSKDREYGNLSGR-IAELESQSRVQNSE 171

Query: 184 HKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYL---GK-VFDIHGGGL 238
            K +  DF LWK      + G++SP+G+GRPGWHIECSAM   +L   G    DIHGGG 
Sbjct: 172 QKHDSKDFALWKSYKGIGDVGYDSPFGKGRPGWHIECSAMIKEHLALKGDYAIDIHGGGT 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE  Q+ CAD  +  A  WIHNGF+ + G KM+KS GN   I + L      
Sbjct: 232 DLLFPHHENEACQTRCADN-QVLAKYWIHNGFVTINGEKMAKSLGNSFFIKDALA----- 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------- 349
             ++   ++R  +L THYR  ++F+ + L  ++  L +  +      I+           
Sbjct: 286 --NYDGEILRFYLLSTHYRAGLNFSEEDLLASKKRLDRLYRLKKRLAILPKKTIPTSLDN 343

Query: 350 ----AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI-- 394
               A L AL +DLN   A+  L      + +  D         +       A +LGI  
Sbjct: 344 AFKTAFLDALNDDLNISKALSVLDDFIANANEQLDSKQNDKIPQIYANLELVAKVLGIGI 403

Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
               E  K  +++++   IE L+++R    K+K F +AD IR++L +KG  + D  N   
Sbjct: 404 KDCFEYFKLGVSEDLKTEIENLLKKRAEFKKIKDFQNADKIREELRNKGIEIMDTPNGCI 463

Query: 451 GQRM 454
            +++
Sbjct: 464 WEKI 467


>gi|227826502|ref|YP_002828281.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229583664|ref|YP_002842165.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227458297|gb|ACP36983.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228018713|gb|ACP54120.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 470

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 251/487 (51%), Gaps = 54/487 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++              I +  T+ ++   ++L      
Sbjct: 61  GY--TVIRVQNITDIDDKIIKKSQDTGKDWN------EIVNYYTKDYLDMLSQLKVKI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 --VKEKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKG 345
           + W   V+R   L +HYR PIDF+ + L +A+  L +               P+      
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 346 IIDP---------AVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
            I           +  +A+ ND +T +A+  +H++           R+           +
Sbjct: 342 DIKAYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               + G+   + +     +   I+ +V  R  L +MK +  +D IR++L   G  + D 
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 462 KDKSTWR 468


>gi|227829111|ref|YP_002830890.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227455558|gb|ACP34245.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 470

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 170/487 (34%), Positives = 251/487 (51%), Gaps = 54/487 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++              I +  T+ ++   ++L      
Sbjct: 61  GY--TVIRVQNITDIDDKIIKKSQDTGKDWN------EIVNYYTKDYLDMLSQLKVKI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 --VKEKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKG 345
           + W   V+R   L +HYR PIDF+ + L +A+  L +               P+      
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 346 IID---------PAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
            I           +  +A+ ND +T +A+  +H++           R+           +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               + G+   + +     +   I+ +V  R  L +MK +  +D IR++L   G  + D 
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKFYEISDKIREELLKAGVRILDS 461

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 462 KDKSTWR 468


>gi|332298095|ref|YP_004440017.1| cysteinyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332181198|gb|AEE16886.1| cysteinyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 497

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 167/510 (32%), Positives = 242/510 (47%), Gaps = 71/510 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R++ +F  I       Y CGPTVY+FAHIGN R  +  D+L R L Y   + 
Sbjct: 3   LRLYNTLGRQLQDFIPIHAGKAGFYGCGPTVYNFAHIGNLRAYVFLDILDRTLTYLGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLAPT 120
            +T+V NITDI     +    E   +        ++  I    T  F  D  RL    P 
Sbjct: 62  -ITHVMNITDIGHLSGDADEGEDKMVKTAKDRGQSVLEIAQFYTDAFFGDIDRLNIRRPD 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
              +AT H+P MI LI+ I  +GH Y A   + FD S+ P+YG  +   +D+ K G R+ 
Sbjct: 121 VVCKATEHVPDMIELIKRIEANGHTYTAGGNLYFDVSTFPSYGDLAGLNLDDLKAGARID 180

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +K+NP DF+LW   +  E     W+SPWGRG PGWHIECSAMS  YLG+ FDIH GG
Sbjct: 181 IDRNKRNPFDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGEQFDIHTGG 240

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR---------KMSKSNGNFITI 288
           +D I  HH NEIAQS  A   +K  N W+HN FL +            KMSKS+GNF+T+
Sbjct: 241 IDHIPIHHTNEIAQSEGATG-KKWVNYWLHNEFLVIAKDKESADGGAGKMSKSSGNFLTL 299

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------- 339
             L++      + + A   R  +L  HYR  + F+   +  A+       Q         
Sbjct: 300 QSLVD------KGYDALDYRFFLLGAHYRSQVAFSWAAMDGAKNARKALVQRVAKVLARS 353

Query: 340 ---------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES-TKNHDLLP 383
                          ++ +   +D    +AL NDL T  A+ AL    +++     +++ 
Sbjct: 354 AERVQTGAGLPTKKPSARAHAYLDK-FTAALENDLATPQALSALQTAVKDAELAPEEVVS 412

Query: 384 IFNASAHILGIEVCKEHLNKNISI--------------AIEKLVQERLILLKMKKFSSAD 429
           +      +L +++ K                        I+ L++ER    K K ++ AD
Sbjct: 413 LVQRMDSVLALDLLKNARQLLADETAAAVTDGSDPEAKEIQALIEERTAAKKAKNYARAD 472

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR +L  +G ILED        + T WK+
Sbjct: 473 EIRTELNGRGIILEDT------PQGTVWKR 496


>gi|229580812|ref|YP_002839211.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228011528|gb|ACP47289.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 470

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 251/487 (51%), Gaps = 54/487 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I++YN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRVYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++              I +  T+ ++   ++L      
Sbjct: 61  GY--TVIRVQNITDIDDKIIKKSQDTGKDWN------EIVNYYTKDYLDMLSQLKVKI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 --VKEKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKG 345
           + W   V+R   L +HYR PIDF+ + L +A+  L +               P+      
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 346 IID---------PAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
            I           +  +A+ ND +T +A+  +H++           R+           +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               + G+   + +     +   I+ +V  R  L +MK +  +D IR++L   G  + D 
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 462 KDKSTWR 468


>gi|145590332|ref|YP_001152334.1| cysteinyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|189082071|sp|A4WH15|SYC_PYRAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145282100|gb|ABP49682.1| cysteinyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 476

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 170/471 (36%), Positives = 241/471 (51%), Gaps = 42/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQLEEFVTYTPRLARGYVCGITPYDSVHVGHGRVYVFFDMFRRYLEAQGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII RAR+E  +         +  +   +F + + RL        P+
Sbjct: 60  -VRLVINFTDIDDKIINRAREEFGAEAYKR-WREVPERYIAEFFEMSKRLFIKPAYAYPK 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I+ ++  G+AY A +  + F+   +PNYG  SR++I+E   G RV  + 
Sbjct: 118 VTENVEDMVSWIKALVEKGYAYTAPDGSVYFEVGKVPNYGVLSRQRIEELMAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  TP EP WESPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWESPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN +T+ E L         + 
Sbjct: 238 HHENEIAIAKAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNVVTLREALS-------KYS 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIID-------- 348
              +RLA  M+HYR+P++F+ + L +AE           +  Q     G  D        
Sbjct: 291 GEALRLAYAMSHYRKPMEFSYEVLDQAEEMAKTIYTAYDELGQAVGDAGEEDKEALDYGR 350

Query: 349 --PAVLSALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLPIFNASAHILG 393
                 +AL +D +T  A Q  + LAR                    +L  +   A ILG
Sbjct: 351 YVEEFYAALEDDFSTPQAAQQFYGLARYIISTVLHKIDKISRNTALSILSQYVKMADILG 410

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + + +  + K +  A++  V+ R  L K +++  ADYIR++L   G  L D
Sbjct: 411 V-LERREVPKEVEEAVKAAVEVRAKLRKERQYQLADYIRERLAGIGVELHD 460


>gi|284989249|ref|YP_003407803.1| cysteinyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
 gi|284062494|gb|ADB73432.1| cysteinyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
          Length = 467

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 163/487 (33%), Positives = 239/487 (49%), Gaps = 54/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + EF  +      +YVCG TV    H+G+ R  + FDVL R L     
Sbjct: 1   MSLRLYDTAARAVREFTPLRAGQASVYVCGLTVQGPPHVGHVRAALSFDVLRRWLTASGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VTYVRN+TDIDDKI+ +A +           + +    T+ +      L  L PT++
Sbjct: 61  E--VTYVRNVTDIDDKILVKAAERGVPWWAWAYTNELA--CTRAY----DVLGVLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+P M+ L++ +I  GHAY  + ++ FD  S P YG+ + +K++  +        
Sbjct: 113 PRATGHVPDMVELMERLIDRGHAYAVDGDVYFDVRSFPEYGALTGQKLENLEPAADTGTD 172

Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K++P DF LWK     EP    W +PWGRGRPGWH+ECSAM+  YLG  FDIHGGGLD
Sbjct: 173 ERKRDPRDFALWKAHKDGEPQTAAWATPWGRGRPGWHLECSAMAERYLGPEFDIHGGGLD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE AQS  A      A  W+HNG++ L G KMSKS GN   ++E+++  +   
Sbjct: 233 LRFPHHENEQAQSRAAGDG--FAQYWLHNGWVTLGGEKMSKSLGNTALVDEVVQRVR--- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDP 349
                  +R  ++  HYR  I+FT   L EA     +                   ++  
Sbjct: 288 ----PVELRYYLVAPHYRSTIEFTDAALEEAGAAYRRIESFVKRAAERVGADAGSPVLCA 343

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH 400
              +AL +DL T +A+ A+H+  RE                L    A   +LG++    H
Sbjct: 344 DFTAALDDDLGTPAAVAAVHEAVREGNTALAEGNEKAVAGALGSVRAMLGVLGLDPLDPH 403

Query: 401 ---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                    L +     +   +++R      K +++AD IR QL + G  +ED       
Sbjct: 404 WAAAGGGDRLGEVADGLVALALEQRQAARARKDYAAADAIRDQLAALGVQVEDT------ 457

Query: 452 QRMTRWK 458
            +  RW+
Sbjct: 458 PQGPRWE 464


>gi|189219647|ref|YP_001940288.1| Cysteinyl-tRNA synthetase [Methylacidiphilum infernorum V4]
 gi|189186505|gb|ACD83690.1| Cysteinyl-tRNA synthetase [Methylacidiphilum infernorum V4]
          Length = 469

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 163/479 (34%), Positives = 237/479 (49%), Gaps = 47/479 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
              +++NTL R++     I+P  + +Y CGPTVY+ AHIGN R  +  D+L R L  +  
Sbjct: 9   PPFQLFNTLSRRVEPINPINPPQVTIYACGPTVYNLAHIGNFRTFLCVDLLRRALELFGY 68

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +  N TD+DDK I  +R          A+S  T +   +F KD   L  L P  Q
Sbjct: 69  K--VVHAMNYTDVDDKTIAASRA------AGVALSAYTQRYIDEFEKDMRSLHMLKPHFQ 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-P 180
           PRAT HI +MI  I+ ++   HAY   +  + F  +S P YG  S  + D+ K+GT+V  
Sbjct: 121 PRATEHIEKMIEFIRQLLEKDHAYIGVDGSVYFRINSFPEYGKLSHLEKDKLKLGTQVFS 180

Query: 181 EKYHKKNPADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           ++Y K+N  DF LWK       E GW SPW  GRPGWHIECS MS  YLG+  DIH GG+
Sbjct: 181 DEYVKENYGDFALWKARKTEDGEIGWISPWEIGRPGWHIECSTMSMCYLGEEIDIHCGGV 240

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS      +     W H   + +EG KMSKS GN  T+ +++      
Sbjct: 241 DLIFPHHENEIAQSESVTG-KNFVRHWFHVSHVLVEGEKMSKSLGNIYTLRDIIN----- 294

Query: 299 GRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
            + +   V+R  +L  +HYR+ ++FT Q +  +   L +  Q  +    I P        
Sbjct: 295 -KGFSPRVLRYHLLTSSHYRQTLNFTWQGMESSREALKRIDQWLSRLQNIPPSQFQQQEG 353

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-------NASAHILGI 394
                     + AL +DLN   A+  L +  R + +  D                 +LG+
Sbjct: 354 PEQQLFVRRFIEALADDLNITEAVGHLFEWIRLTNRLMDKGEALPQIDKAWQLVDAVLGV 413

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                 LN  +   I+ L+  R    K K +  +D IR++L+  G+I++D        +
Sbjct: 414 ----GELNVQVPPEIQSLLAIRAEARKHKDWQKSDNIRQKLQEMGWIVQDTPEGQKVWK 468


>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
 gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
          Length = 458

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 168/474 (35%), Positives = 234/474 (49%), Gaps = 68/474 (14%)

Query: 31  CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
           CGPTVY + HIGNAR    FDV+ R LRY      V YVRN TD+DDKII+ A       
Sbjct: 2   CGPTVYSYIHIGNARTFTSFDVVVRYLRYRGY--RVHYVRNYTDVDDKIIKAA------H 53

Query: 91  PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
              +    +  +  + F  DT  L  + P   P+ + H+P+++ +I+ ++  G AYE+  
Sbjct: 54  ETGEEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEHLPEILRIIETLVAKGVAYESQG 113

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
           ++ F  SS P Y   S+RK+D+   G RV     K+ P DF LWK + P EP W+SPWG+
Sbjct: 114 DVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQKREPLDFALWKAAKPGEPSWDSPWGK 173

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWHIECSAMS+ YLG+ FDIHGG LDLIFPHHENEIAQS  A   +  A  W+H GF
Sbjct: 174 GRPGWHIECSAMSAKYLGESFDIHGGALDLIFPHHENEIAQSEAASG-KPFAKYWMHCGF 232

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           L++EG KMSKS GN + + + L           A  +R   L THYR P+ F+ + + ++
Sbjct: 233 LDIEGAKMSKSLGNVVRLRDALTRV-------DAEALRFFFLSTHYRHPLHFSDKAIADS 285

Query: 331 EILLSKWPQTST------------------SKGIIDPAVLSALYNDLNTVSAIQA---LH 369
           E  L  + +T                      G       +A+ +D N   A+ A   L 
Sbjct: 286 EYRLEYFYETLRKVDERVGGKDFGQGPLHGEPGRFLQEFEAAMDDDFNCPGALGALSGLF 345

Query: 370 KLARESTKN-------------HDLLPIFNASAHILGI---EVCKEHLNKNISIA----- 408
            L  E T                 L       + +LG+   +  +  L +          
Sbjct: 346 GLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVLGLFEDDPTQWLLRRRDRAVKERGI 405

Query: 409 ----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               +E+L+ ER    K K F+ AD +R +L+ +G  + D          T WK
Sbjct: 406 DVAQVERLLSERNEARKSKNFAEADRLRSELKGQGVEIMDT------VAGTSWK 453


>gi|126458659|ref|YP_001054937.1| cysteinyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|189082072|sp|A3MS54|SYC_PYRCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|126248380|gb|ABO07471.1| cysteinyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 473

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 167/471 (35%), Positives = 239/471 (50%), Gaps = 42/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNT  R++ EF    P   R YVCG T YD  H+G+ R  + FD+  R L     E 
Sbjct: 1   MRIYNTATRQVEEFTTYTPGLARGYVCGITPYDHVHVGHGRVYVFFDMFRRYLESLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII +AR+E            +  +   +F + + RL        PR
Sbjct: 60  -VRLVVNFTDIDDKIIAKAREEFGPEAYKR-WREVPERYIAEFFEVSKRLFIKPAYAYPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T ++  M+  I  ++  G AY A +  + F+   +PNYG  SR++I+E   G RV  + 
Sbjct: 118 VTENVDDMVKWISALVEKGFAYVAPDGSVYFEVGKVPNYGVLSRQRIEELIAGARVEPEP 177

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK  +P EP W SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 237

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L         + 
Sbjct: 238 HHENEIAIAKAYFGVDNFAKYWIHVGYLTVRGEKMSKSLGNVITLREVLS-------KYS 290

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTSTSKGIID-------- 348
              +RLA  M+HYR+P++F+ + L +AE           +  Q     G  D        
Sbjct: 291 GEALRLAYAMSHYRKPMEFSFELLDQAEDIVKTLYTAYDELSQAVADAGDADRERVDIGN 350

Query: 349 --PAVLSALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLPIFNASAHILG 393
              A  SAL +D +T  A+Q L+  A+                    +L  +   A ++G
Sbjct: 351 FKAAFYSALEDDFSTPEAVQQLYAAAKYIISTVLHKVDKLSKNTVLAILADYVKMADVIG 410

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +   +E   K +  A++ LV+ R  L   + +  ADY+R++ ++ G  L D
Sbjct: 411 VLERREVA-KEVEEAVKALVEVRARLRSERLYQLADYVRERAKALGAELHD 460


>gi|148642328|ref|YP_001272841.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
           35061]
 gi|148551345|gb|ABQ86473.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
           35061]
          Length = 448

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 169/466 (36%), Positives = 237/466 (50%), Gaps = 44/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+TL R    F+ ++ + I ++VCGPTVYD AHIG+ R  I FD + R   Y     
Sbjct: 1   MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII+R+++             I  K  +++++D  +L         R
Sbjct: 59  TVFYIQNITDVDDKIIKRSKE------TGIPAGDIAKKFEKRYIEDMAKLNVTGVNLFAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+ ++I  IQ +I  G AYE  + + F   +   +G  S R I+E +    +  K  
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFKEFGKLSNRNIEELESHREIA-KTT 171

Query: 185 KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           KKNP DF LWK+     EP W SPWG GRPGWHIE +A++ +Y G  +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EI Q           N W+H GFLN+ G KMSKS  NFITI ELL       + + 
Sbjct: 232 HHEAEITQMEAVSGKSPMVNYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
           A V R  +L THYR PIDF+ + L ++E  L K  +   S                 I  
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENATSDYAPLKIAK 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
                ++ +D NT  AI A+  L  +S    D L            +    ILGI+   +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVSAIREFLDDVGFILGIDFVLK 404

Query: 400 HLNKNISIAIEKLV-QERLILLKMKKFSSADYIRKQLESKGFILED 444
                 S  +  L+   R  L   K++  +D IR QL   G+ + D
Sbjct: 405 DTGS--SDELLTLISDVRQELRNNKQYELSDKIRNQLTDLGYEISD 448


>gi|86131788|ref|ZP_01050385.1| cysteine-tRNA ligase [Dokdonia donghaensis MED134]
 gi|85817610|gb|EAQ38784.1| cysteine-tRNA ligase [Dokdonia donghaensis MED134]
          Length = 494

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 156/488 (31%), Positives = 230/488 (47%), Gaps = 42/488 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +++ +YN+L  K   F  +    + MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   DQELTVYNSLSGKKEIFTPLLEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHLG 65

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD      +  + E                +  K T  F     +   L
Sbjct: 66  YK--VRYVRNITDAGHLTDDADQGEDKIAKKARLEQIEPMEVVQKYTLDFHDILNKFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ II +G+AYE N  + FD         YG  S RK+++  
Sbjct: 124 PPSIEPTATGHIIEQIEIIKKIIDNGYAYEKNGSVYFDVIKFNEDHEYGKLSGRKLEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K NP DF LWK++ P     W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 184 TNTRALSAQDEKNNPQDFALWKKAEPEHIMRWPSPWGDGFPGWHLECTAMSTKYLGEQFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+  A   E     W+H   L L G+KM+KS GN I   E+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQNEAAIGTEP-VKYWLHANMLTLNGQKMAKSTGNSINPGEIF 302

Query: 293 ETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
                   + +   V R  +L + YR  +DF+   L  +E   ++  +       +D   
Sbjct: 303 TGDSPHLTKGFAPSVARFFILQSSYRSIMDFSNDALLASEKGFNRLMEALKIAKNLDTSK 362

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
                      +  +A+ +D NT   I  L    ++     D            LL   N
Sbjct: 363 ESSFNVNDWKASCYAAMNDDFNTPILIAHLFDAVKQIHLIKDGKATITASDLKLLLETIN 422

Query: 387 AS-AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           A    +LG+E      +  +  +S  +E L++ R    + K F+ +D IR +L   G  L
Sbjct: 423 AFVFDVLGLEDNNAFAKADDSKLSGTVELLIKLRKEARENKDFALSDKIRDELIELGIQL 482

Query: 443 EDYKNPDN 450
           +D +    
Sbjct: 483 KDGREGTT 490


>gi|68535378|ref|YP_250083.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|109894894|sp|Q4JXJ2|SYC_CORJK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68262977|emb|CAI36465.1| cysS3 [Corynebacterium jeikeium K411]
          Length = 478

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 155/493 (31%), Positives = 240/493 (48%), Gaps = 63/493 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IY+T  R++ +F+ I   +  +Y+CG TV    HIG+ R  + FD+L   L     
Sbjct: 1   MTLRIYDTAARQLRDFEPIREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               + + + F     +L    P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILTKAAENDRPWW------EWAATHERAFNWAYDQLGVTPPSIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT H+PQMI  +Q II +GH Y A+  +    ++I NYG  S +K+DE   G      
Sbjct: 113 PRATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPATIDNYGFLSGQKLDEMDQGESA--G 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG  FDIH GGLDL F
Sbjct: 171 TGKRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGSEFDIHCGGLDLQF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQ+  A      A  W+HNG++ + G KMSKS GN ++I  +L+  +      
Sbjct: 231 PHHENEAAQATAAGDG--FARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIIDP------ 349
               +R  +   HYR  ++++   L EA       E  L +  +  T +  +DP      
Sbjct: 283 -PVELRYYLGSAHYRSMLEYSEAALGEAAAGYRRIEKFLVRAIEYVTGETAVDPQALPVG 341

Query: 350 ----AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHIL 392
                    + +DL    ++  +H + RE  K  D  P                A A +L
Sbjct: 342 EMPAQFAEKMDDDLAVPQSLAVIHDVVREGNKLLDAKPTDEAKQQVKEIAGQVRAMAAVL 401

Query: 393 GIEVCKEHLNK--------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
           G++   E   +               + + ++  ++ R      K +++AD +R +L   
Sbjct: 402 GVDPLSEAWLESTKAAAGGSDVAMGALDVLVKAELERRAEARAAKDWATADEVRDRLAEA 461

Query: 439 GFILEDYKNPDNG 451
           G  + D  +    
Sbjct: 462 GIEVTDTADGAKW 474


>gi|295838034|ref|ZP_06824967.1| cysteine-tRNA ligase [Streptomyces sp. SPB74]
 gi|197699162|gb|EDY46095.1| cysteine-tRNA ligase [Streptomyces sp. SPB74]
          Length = 467

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 160/485 (32%), Positives = 246/485 (50%), Gaps = 49/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T  R+I +F  + P  + +Y+CG TV    HIG+ R  + FD++ R   Y   
Sbjct: 1   MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGVPHIGHIRSGLDFDIMQRWFAYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+VRN+TDIDDKII+++ ++            I  +N + F      L CL PT++
Sbjct: 61  E--VTFVRNVTDIDDKIIKKSAEQDRPWW------AIGYENERAFNAAYDALGCLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HI +MI +++ +I  GHAYE+   + FD  S P+Y   S +++D   +      +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPDYLELSHQELDNL-LQPSGEGE 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF +WK + P EP WE+PWGRGRPGWH+ECSAM+  YLG  FD+HGGGLDLIF
Sbjct: 172 SGKRDARDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGTAFDVHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      ++ A  W+HN ++ + G KM+KS GN + ++E++       + W
Sbjct: 232 PHHENEIAQSRAY--GDEFAKYWVHNAWVTMSGEKMAKSLGNSVLVSEMV-------QRW 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
              V+R  +   HYR  I+++ + + EAE    +                     + PA 
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTELNGGEVAPAAEVPPAF 342

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK---- 398
             A+ +DL    A+  +H   R+                L    A   +LG++       
Sbjct: 343 AEAMDDDLGVPQAVAVVHTTVRQGNSALGADDKEAAVARLAEVRAMLGVLGLDPQSPQWA 402

Query: 399 -------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                  E L+  +   +  ++++R      K + +AD IR QL   G  +ED       
Sbjct: 403 AVGGEQAEDLHGVVDTLVRLVLRQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRW 462

Query: 452 QRMTR 456
              +R
Sbjct: 463 TLGSR 467


>gi|148285058|ref|YP_001249148.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225303|sp|A5CFB8|SYC_ORITB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|146740497|emb|CAM81053.1| cysteinyl-tRNA synthetase, class Ia [Orientia tsutsugamushi str.
           Boryong]
          Length = 478

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 185/492 (37%), Positives = 273/492 (55%), Gaps = 53/492 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL RK   F  ++  +++MYVCGPTVYD  HIGNAR ++V+D+LYR+L + Y 
Sbjct: 1   MNLYIYNTLSRKKERFVPLNCKSVKMYVCGPTVYDIPHIGNARSVVVYDLLYRVLSFLYD 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + +TYVRNITDIDDKII RA++   +I        +T + T +F +D + L C  PT +
Sbjct: 61  RQNITYVRNITDIDDKIINRAKELKINIFK------LTHETTIKFHEDMSYLGCWNPTIE 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT++I  MI +I ++I  G+AY  +   + F   +  +Y   SRR  D   + +    
Sbjct: 115 PKATDNIDVMINIITSLIQTGNAYSTDDGHVYFAVKTFQDYNLLSRRTFDSMMLNSSESS 174

Query: 182 KYHKKNPADFILWKRS----TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           +  K   ADF+LWK +      ++  ++SPWG+GRPGWHIECSAMS  +LG+ FDIHGGG
Sbjct: 175 EQQKSYFADFVLWKPANADNEDIDAVFDSPWGKGRPGWHIECSAMSYKFLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA    + A+ W+HNGFL ++G KMSKS  NF+T+ +L +    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPKSRHASYWVHNGFLTVKGEKMSKSLNNFVTVRDLQKQNIN 294

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
           G        +RL  L THYR+P+DF  + L +A+ +++    T  S              
Sbjct: 295 GA------AVRLMFLSTHYRKPLDFNDKSLNDAKNIINYLYDTIDSVNVTVQQQDNTKAE 348

Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------DLLPIFNASAHILGI- 394
                     ++AL +DLN+  AI  L  +A++  + +       L      ++++LGI 
Sbjct: 349 FKGNAFTVEFINALLDDLNSPKAIVCLLNIAKQIRRQNQSEYKLALTQALLYASNLLGIL 408

Query: 395 ---EVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              +  K+  +       I   I+ L+ +R+   + K ++ AD IR QL S G  L D  
Sbjct: 409 HNYQFIKDSNDVKDNSNVIPHEIDLLIAKRIQAKQDKDWNLADQIRSQLLSNGISLTDKA 468

Query: 447 NPDNGQRMTRWK 458
           +       T WK
Sbjct: 469 DGT-----TSWK 475


>gi|15922576|ref|NP_378245.1| cysteinyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|21264015|sp|Q96YC3|SYC_SULTO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|15623366|dbj|BAB67354.1| 471aa long hypothetical cysteinyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 471

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 169/485 (34%), Positives = 241/485 (49%), Gaps = 54/485 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I+IYNTL RKI   + ++P  ++MYVCGPTVYD+ HIG+ R  + FD + R LR    
Sbjct: 4   MQIRIYNTLGRKIQPLETVEPQTVKMYVCGPTVYDYLHIGHGRTFVSFDAMVRYLRLRGY 63

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V+NITDIDDKII++A++           + I    T+ ++   T+L        
Sbjct: 64  N--VIRVQNITDIDDKIIKKAQE------TGKDWTEIVDFYTKDYLNALTQLKIEI-DQH 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR T HI ++I  IQ +I  GHAY A +  + FD  S P+YG  S  K +E   G     
Sbjct: 115 PRVTYHIKEIINFIQKLIDKGHAYVAKSGSVYFDVDSFPSYGLLSGTKKEEWNQGEEF-- 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF LWK   P EP WESPWG+GRPGWHIECS MS  YLG+ FDIHGGG+DLI
Sbjct: 173 VKEKKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSMRYLGEEFDIHGGGIDLI 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS      ++    W+H  +L +   KMSKS GN I +NE L       + 
Sbjct: 233 FPHHENERAQSEALLG-KQWVKYWVHVSYLTIRKEKMSKSLGNIIPLNEAL-------KK 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------- 338
           W   V+R   L +HYR  +DF    L +A+  L++                         
Sbjct: 285 WGPSVLRYWYLSSHYRSSLDFNEDSLEQAKNALTRLKDAISIIRDVIKEGPKYYSKDEDI 344

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFNAS 388
           Q   +   +  +  +A+  D +T  A+  +H++           R+              
Sbjct: 345 QVQRNIVELIKSFHAAMSEDFDTAKALSYIHEIVSLVFGKIQYSRDFMSAMLAFDALRQF 404

Query: 389 AHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++ G+   + +   + +   I+ +V+ R  L   K +  +D IR  L + G  + D K+
Sbjct: 405 NYVFGVMDEEFYPTYEMLGKVIDAVVEIRNQLRMKKMYDLSDQIRAILANAGVKVLDSKD 464

Query: 448 PDNGQ 452
               +
Sbjct: 465 KSTWR 469


>gi|227503949|ref|ZP_03933998.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227199471|gb|EEI79519.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 477

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 147/487 (30%), Positives = 228/487 (46%), Gaps = 55/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R   +F  +   +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 5   SNLRIFDTATRTQRDFVPVKEGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLMAQGL 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               S   ++F K    L  L P+ +
Sbjct: 65  D--VAFVRNVTDIDDKILNKAAEN------GRPWWEWVSTYEREFTKAYNTLGVLPPSVE 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAY---------EANNEIIFDTSSIP-----NYGSFSRR 168
           PRAT  + QM+  +Q +I  G AY         +    + FD ++       +YGS S  
Sbjct: 117 PRATGFVTQMVDYMQRLIDAGFAYAVPDDTAGVDGAGSVYFDVTAWNAAEGSDYGSLSGN 176

Query: 169 KIDEQKMGTRVPE-KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           ++++   G         K+ P DF LWK + P EP W +PWG+GRPGWH+ECSAMS++YL
Sbjct: 177 RVEDMDQGEGQEALARGKRGPQDFALWKGAKPGEPSWPTPWGKGRPGWHLECSAMSTYYL 236

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G  FDIH GGLDL FPHHENE+AQS  A   +K AN W+HN ++ + G KMSKS GN + 
Sbjct: 237 GSEFDIHCGGLDLQFPHHENEVAQSHAA--GDKFANYWMHNHWVTMAGEKMSKSLGNVLA 294

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
           I+ +LE  +          +R  +   HYR  ++++   LTEA     +           
Sbjct: 295 IDNMLEIVR-------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVNKFDDL 347

Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILG 393
             G        A+ +D+    A+  +H   R   K                  A A +LG
Sbjct: 348 VVGDWTQGFEDAMNDDIAVPKALAEIHTTVRAGNKALAEGSADEARKAAESVRAMAAVLG 407

Query: 394 IEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +   E           +  + + ++  ++ R      K +++AD +R +L + G  + D
Sbjct: 408 FDPLDEQWKDGTLTSNADAALDVLVQAELERRTQARAEKDWATADAVRDRLAAAGITITD 467

Query: 445 YKNPDNG 451
             +    
Sbjct: 468 TADGPTW 474


>gi|218884115|ref|YP_002428497.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765731|gb|ACL11130.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 481

 Score =  485 bits (1249), Expect = e-135,   Method: Composition-based stats.
 Identities = 167/495 (33%), Positives = 237/495 (47%), Gaps = 56/495 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   IKIY+TL R + E Q I+P  ++MYVCGPTVYD+ HIG+ +  +++D   R L   
Sbjct: 4   MLPAIKIYDTLSRDLKELQPIEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLSLR 63

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V +V NITDIDDKII+R++ E          S I  + T+ ++    +L      
Sbjct: 64  GY--HVVHVMNITDIDDKIIKRSQDE------GRDWSEIVDEYTRDYLSALEKLNV-TID 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           H PR + HI ++I  IQ +I  G+AY  ++  + F+     +YG  S R + ++  G   
Sbjct: 115 HHPRVSEHINEIIGFIQGLIDKGYAYIASSGSVYFNVDKYDDYGHLSGR-VSKETWGQEQ 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K+NP DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG  FDIHGGG D
Sbjct: 174 EFLSEKRNPYDFALWKAAKPGEPYWESPWGRGRPGWHIECSVMSSRYLGSRFDIHGGGTD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQS      +   +IW+H+G + +   KMSKS  N I + E         
Sbjct: 234 LIFPHHENERAQSEAFFGSKPWVSIWMHSGLVMVGKDKMSKSLKNIIPLKEAFN------ 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
             W    +RL  L THYR+P+ F+ + L  +  L  +    +     +            
Sbjct: 288 -KWGPMPLRLWYLSTHYRKPLYFSEEALENSVKLYERLTTAAQLLRRLAHESTGLHYARE 346

Query: 351 ---------------VLSALYNDLNTVSAIQALHK----LARESTKN------HDLLPIF 385
                            +AL +D NT  A+  +++    L R+   N         + + 
Sbjct: 347 EDLKVFNQLVSLHTRFHNALSDDFNTAEALAVVNEYLTILFRDIQYNPRHLLVSTSIKLL 406

Query: 386 NASAHILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                +LG+   +    E     +   +E L+  R  L K   +  +D IR  L   G  
Sbjct: 407 REFNTVLGVLDRELEGVEESEALLDSMVEILINVRKELRKRGIYDLSDTIRSDLSKIGIQ 466

Query: 442 LEDYKNPDNGQRMTR 456
           L D        R+ +
Sbjct: 467 LMDKGLETTWVRVRK 481


>gi|229094812|ref|ZP_04225817.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228688555|gb|EEL42428.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 420

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 151/444 (34%), Positives = 221/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   E  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N++  KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419


>gi|89069973|ref|ZP_01157305.1| cysteinyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044421|gb|EAR50552.1| cysteinyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 469

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 197/454 (43%), Positives = 250/454 (55%), Gaps = 28/454 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT  RK+  F  IDP+N+RMYVCGPTVYD AH+GNAR  +VFD+L+RLLR  YG  
Sbjct: 4   IQLRNTKSRKVEPFAPIDPTNVRMYVCGPTVYDRAHLGNARSAVVFDMLFRLLRQVYGAD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITD+DDKI  RA +          I  IT + T  +  D   L  L PTH+PR
Sbjct: 64  AVTYVRNITDVDDKINARAAE------TGRTIRDITEETTGWYRDDMAALGVLRPTHEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I  M  +I  +I  G+AY A   ++F   S   YG  S R +D+   G RV    +
Sbjct: 118 ATEWIGAMKEMISTLIERGNAYAAEGHVLFAVESDGAYGGLSGRSVDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK S   +PGW+SPWGRGRPGWHIECSAMS   LG+ FDIHGGG DL+FPH
Sbjct: 178 KRDPMDFVLWKPSADDQPGWDSPWGRGRPGWHIECSAMSYELLGETFDIHGGGNDLMFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS CA      A  W+HN  L +EG+KMSKS GNF T+ +LLE      +  P 
Sbjct: 238 HENELAQSRCAHPEGGFARFWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------QGVPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALYNDLNTV 362
            V+RL ML T Y +P+D+T ++   AE  L KW   +   + G +   VL+AL +DLNT 
Sbjct: 292 EVMRLVMLGTQYSKPMDWTEEKRASAEATLRKWRAMTEGVAPGEVAAPVLAALADDLNTA 351

Query: 363 SAIQALHKLARESTKNHDLLPIF--------------NASAHILGIEVCKEHLNKNISIA 408
            AI  LHKLA                              A   G        ++     
Sbjct: 352 GAIAELHKLAAAGDAAGLRASAGLLGLLGDELGDWKWRVVAQDFGAVQYVGDGDEAQGAL 411

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
              + +        K F++AD IR      G  L
Sbjct: 412 ARGVAERWAACRAEKDFANADRIRSAALEAGIEL 445


>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 479

 Score =  485 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 179/480 (37%), Positives = 240/480 (50%), Gaps = 60/480 (12%)

Query: 11  LERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           + RK   F   DP    + MYVCG TVYD++HIG+AR  + FDVLYR L     +  VTY
Sbjct: 1   MTRKKEPFAPNDPDDKKVSMYVCGVTVYDYSHIGHARVYVAFDVLYRTLTRLGYD--VTY 58

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           VRN TD+DDKII+RA +        +    +  +    F +D + L CL PT +PRAT H
Sbjct: 59  VRNFTDVDDKIIKRANEN------GEECDALVERFIAAFHEDMSSLGCLPPTMEPRATRH 112

Query: 129 IPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           +  ++ + + ++  GHAY A   ++ F   S+P YG  S RK+++ + G RV     KKN
Sbjct: 113 VDDILRVTEALVEKGHAYPAEGGDVYFSVDSLPTYGKLSGRKLEDNRAGERVAIDERKKN 172

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHE 246
           PADF LWK S P EP W SPWG GRPGWHIECSAM      GK  DIHGGG DL+FPHHE
Sbjct: 173 PADFALWKASKPGEPSWASPWGEGRPGWHIECSAMIDATFGGKSIDIHGGGQDLVFPHHE 232

Query: 247 NEIAQSCCADRI----------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           NE+AQS                      W+HNGF+ ++  KMSKS GNF TI E+     
Sbjct: 233 NELAQSTAFCGCCDDAKDAKDAPPFVKYWVHNGFVKVDSEKMSKSLGNFFTIREVTA--- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAVLSAL 355
                + A  +R  +L THYR  I++T + L EA   L    QT S +    + AV +AL
Sbjct: 290 ----KYDATALRWMLLGTHYRAAINYTQRALEEASDRLYYLYQTLSEASDETETAVGAAL 345

Query: 356 YNDLNTVSAIQALHKLAREST-------------KNHDLLPIFNASAHIL---GIEVCKE 399
            +DLNT  AI +L    +                +   +  +  A    L   G+   K 
Sbjct: 346 SDDLNTPLAIASLSSPLKLLNDFVSTKKGKKAQGRIAAMKALVRAVTETLDAVGLPSAKA 405

Query: 400 HLNKNIS--------------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                +                 ++  V  R    + K F+ +D IR +L +KG  L D 
Sbjct: 406 DAVDVLERLRALTLTRAGLSREDVDAAVAARKAAREAKDFAESDRIRDELGAKGVALMDG 465


>gi|300744321|ref|ZP_07073340.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380046|gb|EFJ76610.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
          Length = 476

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/490 (33%), Positives = 246/490 (50%), Gaps = 53/490 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y++    I +F+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY   
Sbjct: 1   MTMRFYDSATSSIRDFEPVVPGEARIYYCGATVQGEPHVGHIRSALVFDQLARWMRYRGF 60

Query: 63  EKCVTYVRNITDIDDKIIER----ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  VT VRN+TDIDDKI+ +    A+  +     N+    +  +  + F +    L    
Sbjct: 61  K--VTTVRNVTDIDDKILAKSVESAQPTYTGEHPNEQWWALAYRYEKVFARAYATLGIDP 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ +D+ + 
Sbjct: 119 PTYEPRATGHIPEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGALTRQSVDDMQD 178

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK     EP    W+SPWGRGRPGWH+ECSAM+  YLGK FD
Sbjct: 179 SADADPR-GKRDPRDFALWKGYKEGEPLTAAWDSPWGRGRPGWHLECSAMAGKYLGKRFD 237

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAA--GDDFANFWMHNGMVTYEGEKMSKSIGNTISPVQML 295

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------- 343
           +  +         V+R  +   HYR  +D+    L EA + + +      +         
Sbjct: 296 QQAR-------PLVVRYYLGSAHYRSVLDYRPTSLEEARVAIERVEAFLAATLELMVPNP 348

Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI- 394
               +      AL +D+N   A+  LH+  R             +      A A++LG+ 
Sbjct: 349 QDRRVPQDFADALDDDMNIPRALAVLHEQTRAGNAALAAGADASEFANAVWAMANVLGLI 408

Query: 395 -------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                         ++ +   I  ++++R      K +++AD +R  L + G  ++D   
Sbjct: 409 SLMNLDGSGASGAEHQALDALIHTILEQRASARAEKDWATADRMRDVLAAAGITVKD--- 465

Query: 448 PDNGQRMTRW 457
              G + + W
Sbjct: 466 ---GAQGSTW 472


>gi|323473579|gb|ADX84185.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323476226|gb|ADX81464.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 470

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 251/487 (51%), Gaps = 54/487 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I+IYN+L RK+ EF  I+P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII++++              I +  T+ ++   ++L      
Sbjct: 61  GY--TVIRVQNITDIDDKIIKKSQDTGKDWN------EIVNYYTKDYLDMLSQLKVKI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T+HI ++I  +Q +I  GHAY A +  + FD  + P+YG  S  K +E   G   
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 --VKEKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ+      EK  + W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKG 345
           + W   V+R   L +HYR PIDF+ + L +A+  L +               P+      
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341

Query: 346 IID---------PAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
            I           +  +A+ ND +T +A+  +H++           R+           +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               + G+   + +     +   I+ +V  R  L +M+ +  +D IR++L   G  + D 
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMRLYEISDKIREELLKAGVRILDS 461

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 462 KDKSTWR 468


>gi|311112938|ref|YP_003984160.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310944432|gb|ADP40726.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 474

 Score =  484 bits (1247), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/488 (33%), Positives = 246/488 (50%), Gaps = 53/488 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y++    I +F+ + P   R+Y CG TV    H+G+ R  +VFD L R +RY   + 
Sbjct: 1   MRFYDSATSSIRDFEPVVPGEARIYYCGATVQGEPHVGHIRSALVFDQLARWMRYRGFK- 59

Query: 65  CVTYVRNITDIDDKIIER----ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            VT VRN+TDIDDKI+ +    A+  +     N+    +  +  + F +    L    PT
Sbjct: 60  -VTTVRNVTDIDDKILAKSVESAQPTYTGEHPNEQWWALAYRYEKVFARAYATLGIDPPT 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           ++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ +D+ +   
Sbjct: 119 YEPRATGHIPEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGALTRQSVDDMQDSA 178

Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK     EP    W+SPWGRGRPGWH+ECSAM+  YLGK FDIH
Sbjct: 179 DADPR-GKRDPRDFALWKGYKEGEPLTAAWDSPWGRGRPGWHLECSAMAGKYLGKRFDIH 237

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGGLDL FPHHENE+AQS  A   +  AN W+HNG +  EG KMSKS GN I+  ++L+ 
Sbjct: 238 GGGLDLRFPHHENELAQSTAA--GDDFANFWMHNGMVTYEGEKMSKSIGNTISPVQMLQQ 295

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------- 346
            +         V+R  +   HYR  +D+    L EA + + +      +           
Sbjct: 296 AR-------PLVVRYYLGSAHYRSVLDYRPTSLEEARVAIERVEAFLAATSELMAPDPQE 348

Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--- 394
             +      AL +D+N   A+  LH+  R             +      A A++LG+   
Sbjct: 349 RRVPQDFADALDDDMNIPRALAVLHEQTRAGNAALAAGADASEFANAVWAMANVLGLTSL 408

Query: 395 -----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                       ++ +   I  ++++R      K +++AD +R  L + G  ++D     
Sbjct: 409 MNLDGSGASGAEHQALDALIHTILEQRASARAEKDWATADRMRDVLAAAGITVKD----- 463

Query: 450 NGQRMTRW 457
            G + + W
Sbjct: 464 -GAQGSTW 470


>gi|33865235|ref|NP_896794.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|61216278|sp|Q7U8C0|SYC_SYNPX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33638919|emb|CAE07216.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 493

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 167/512 (32%), Positives = 243/512 (47%), Gaps = 75/512 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MSLRLTNTLTRRTEPFTPLTPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRFLIWRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+V+N TDIDDKI++RA ++      N +++ ++ +N   F +D   L  L P   
Sbjct: 61  E--VTFVQNFTDIDDKILKRAAEQ------NSSMTEVSERNIDAFHQDMDALGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP 180
           PRAT  +  +  LI  +   G AY A+ ++ F       YG  S R + EQ+     RV 
Sbjct: 113 PRATQCLDGIRSLIGELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLSEQQDNAAGRVA 172

Query: 181 EKYH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +     K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGEGRPGWHIECSAMVRAELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   E  A +W+HNG +N+ G+KMSKS GNF TI  LLE+    
Sbjct: 233 DLVFPHHENEIAQSEAATGKE-LARVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQT-------- 340
                   +RL +L  HYR+P+DF            + L  A  L  ++           
Sbjct: 288 --GVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERYSDQLGWPSPAA 345

Query: 341 -------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
                        + +   ++   + ++ +DLN+  A+  L  LA+      + L     
Sbjct: 346 LSEDAIGPQTSPDAEALQALEQQFIGSMEDDLNSSGALAVLFDLAKPLRALANRLERGDE 405

Query: 384 ----------------IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
                           +    A +LG+       +     +I+  +  R      K ++ 
Sbjct: 406 PGLPEADIRNLAPRWQLLRELAVVLGLRGETSGQSNMDDESIDATIAARKAAKAAKNYAE 465

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           AD IR +L ++G  L D         +T W +
Sbjct: 466 ADRIRNELTAQGIELIDKPGG-----ITEWIR 492


>gi|126735695|ref|ZP_01751440.1| cysteinyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126714882|gb|EBA11748.1| cysteinyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 477

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 206/477 (43%), Positives = 258/477 (54%), Gaps = 41/477 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++ NT  RK  +F  IDP N+R+Y+CGPTVYD AHIGN RP +VFDVL+RLL+  YG  
Sbjct: 4   IRLNNTKTRKREDFIPIDPKNVRLYLCGPTVYDRAHIGNLRPSLVFDVLFRLLKEVYGPD 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +         AI  IT++  Q +  D   +    PTH+PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAE------TGRAIGDITAETIQWYHDDLDAVGLQRPTHEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+HI QMI +I+ +I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATDHIAQMIAMIEVLIEKGHAYAAEGHVLFAVESYDAYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK S    PGW SPWG GRPGWHIECSAMS   LG+ FDIHGGG DL FPH
Sbjct: 178 KRNPMDFVLWKPSGDGVPGWNSPWGYGRPGWHIECSAMSLELLGESFDIHGGGNDLQFPH 237

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA    + A  W+HN  L +EG+KMSKS GNF TI +LL+      +  P 
Sbjct: 238 HENEIAQSACAHPTGEFARYWVHNEMLQVEGKKMSKSLGNFFTIRDLLD------QGVPG 291

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------IDP 349
            VIRL ML THY + +D+T  R  EAE  L KW       G                 D 
Sbjct: 292 EVIRLVMLGTHYGKTMDWTETRRAEAEGTLRKWYGILQGHGFGPELIAALEAEGKWQPDA 351

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEHL 401
             +  L NDLNT  A+  LH LA+   K    L  F     +LG+        +      
Sbjct: 352 EFIGVLANDLNTSGALARLHVLAK--GKTPVALAGFAYGMQMLGLVNDWSAIPQFDGGEA 409

Query: 402 NKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
              ++ AI   V     +R      K ++ AD +R  L + G  + D          
Sbjct: 410 GSGVAPAIATRVDALLADRAAARAAKDWARADEVRDILNAAGVQVTDVGGQATWAPG 466


>gi|326335690|ref|ZP_08201876.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
 gi|325692119|gb|EGD34072.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
           F0234]
          Length = 494

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 157/493 (31%), Positives = 234/493 (47%), Gaps = 46/493 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  ++KI+N+L  +   F  +  +++ MYVCGPTVY   H+GN R  + FD +YR L++ 
Sbjct: 1   MNHQLKIFNSLTGEKEVFVPLHANHVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRALKFL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD     DD  +   R    S         I  K T  F K       
Sbjct: 61  GYK--VRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDE 172
           L PT +P AT HI + I L + ++  G AYE+N  + FD         NYG  SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNRRGLNYGELSRRNIEE 178

Query: 173 QKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
               TR    +  K+NP DF LWK+++P     W SPWG G PGWH+EC+ MS+ YLG  
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL FPHHE EIAQ             W+H   L + G++MSKS GN+I   +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHGESP-VRYWMHANMLTMNGQRMSKSTGNYILPMQ 297

Query: 291 LLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           L+     F  + +   V+R   +  HYR  +D + + +  AE   ++  +   +   + P
Sbjct: 298 LVSGNNTFFEKPFAPAVVRFCFMQAHYRSVLDISNEAMLAAERGFARLMEAMKTINELTP 357

Query: 350 -----------------AVLSALYNDLNTVSAIQALHKLAR------------ESTKNHD 380
                                AL +D N+   I  L +  +             + +  +
Sbjct: 358 TSNTPTALTTMIENWKDKCYDALLDDFNSPMLIAHLFEAVKWIFQVKNDEEKISAAELKE 417

Query: 381 LLPIFNAS-AHILGIEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           L  + NA    +LG++  ++    N  +   ++ L+  R      K ++ +D IR +L +
Sbjct: 418 LQTLMNAFVFDVLGLQSEEQTNNYNDKLDGVLQLLINMREEARANKDWTLSDKIRNELLT 477

Query: 438 KGFILEDYKNPDN 450
            G  L+D K   +
Sbjct: 478 IGIQLKDGKEGTS 490


>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
          Length = 606

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 185/549 (33%), Positives = 256/549 (46%), Gaps = 116/549 (21%)

Query: 3   KKIKIYNTLERKITEFQAI--DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +++ ++NTL R+   F+      + + MYVCG TVYD++HIG+AR  + FDV+YRLLR+ 
Sbjct: 72  RELLLHNTLTRQKEVFRPRADQGNRVSMYVCGVTVYDYSHIGHARAYVAFDVIYRLLRHL 131

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                VTYVRN TD+DDKII RA          +    +  +   +F  D   L CL P 
Sbjct: 132 GY--AVTYVRNFTDVDDKIIARAAA------AGEEPLALARRFIAEFHADMELLGCLPPD 183

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRAT +IP M+ +IQ II HGHAY    ++ FD +S+P YG  S R  ++ + G RV 
Sbjct: 184 LEPRATEYIPHMVAMIQRIIDHGHAYAVGGDVFFDVASLPGYGRLSGRSQEDNRAGERVA 243

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+  ADF LWK + P EP WESPWG GRPGWHIECSAM    LG+V DIHGGG DL
Sbjct: 244 VDERKRGAADFALWKAAKPGEPTWESPWGPGRPGWHIECSAMIREVLGEVIDIHGGGRDL 303

Query: 241 IFPHHENEIAQSCCADR-------------------------IEKTANIWIHNGFLNLEG 275
           +FPHHENE+AQS  A                            ++    W+HNGF+N++ 
Sbjct: 304 VFPHHENELAQSRAASGACSCGHDHGAATASASASNGSGGGGQDEFVRYWLHNGFVNVDS 363

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GNF TI E++         +    +R  ++ T YR+PI++T + L EA   + 
Sbjct: 364 EKMSKSLGNFFTIREVVA-------QYHPRALRWFLVGTQYRQPINYTQRALEEASDRVF 416

Query: 336 KWPQTSTSKGII------------------------------DPAVLSALYNDLNTVSAI 365
              QT    G +                                 V +AL +D+NT  AI
Sbjct: 417 YLYQTLADMGAVLDGGEEGQAALAAARQQLAAPAAAASGSGLLAEVQAALTDDVNTPLAI 476

Query: 366 QALHKLAREST------KNHDLLPIFNASAHI-LGIEVCKEHLNKNISIAIEKLVQERLI 418
            A     + +       K         A A     +E C + L        + L++ R +
Sbjct: 477 AAFSAPLKSANDLVHTKKGKKQAGRLQALAECYAALETCLQLLGLWAEQPQDVLLELRQL 536

Query: 419 LLKMKKFSSA----DY----------------------IRKQLESKGFILEDYKNPDNGQ 452
            LK      A    D                       +R +LE+ G ++ D        
Sbjct: 537 ALK-----RAGLGEDEIAAAIEERAAARAAKDYAAADVVRLRLEAAGILIMDT------P 585

Query: 453 RMTRWKQKP 461
           + T WK  P
Sbjct: 586 QGTTWKPGP 594


>gi|294495735|ref|YP_003542228.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666734|gb|ADE36583.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 471

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 163/489 (33%), Positives = 243/489 (49%), Gaps = 56/489 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL RK   F  +    + +Y CGPTVY+  HIGN R  ++ D L R+L Y     
Sbjct: 2   LRLYNTLTRKKEVFHPLKEEEVSIYACGPTVYNIPHIGNYRTFLMTDNLVRILEYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  +++         ++   T K T++F      L     +  PR
Sbjct: 60  TVNLVMNITDIDDKTIRDSKK------AGMSLKEFTEKYTEEFFCGLDMLNIQRASSYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT ++  MI L Q ++  G AYE +  + +  ++ P YG  S+   +  K+G  V  ++Y
Sbjct: 114 ATENVDGMIELAQTLMEKGLAYEKDGSVYYRIAAFPEYGKLSKLDFNSIKVGASVDVDEY 173

Query: 184 HKKNPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF+L K ST  E      +ESPWG+ RPGWH ECS MS ++ G   DIH GG+D
Sbjct: 174 DKDNPRDFVLLKASTQEEIERGIYYESPWGKIRPGWHTECSVMSMNHFGPSLDIHTGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +     WIH   L ++G KMSKS GN  T+ EL+E      
Sbjct: 234 LIFPHHENEIAQSEGATG-KPFVRYWIHGEHLIVDGEKMSKSKGNVFTLPELVE------ 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------- 343
             +   V+R   +  HYR+ +DF+      A+    K  +T  +                
Sbjct: 287 -KYGGEVVRFMFMSVHYRKKLDFSDSFAQNAQNSYFKLRETLENLQFAIKGADDNEYPSD 345

Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
                  G ++    +AL +D+N   AI   H+L+R S +  +          LL ++  
Sbjct: 346 KEMIDLSGNLEDDFRNALEDDMNIPKAIAVYHELSRISNQYLESGRNKDVLEKLLSLYRK 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            A  LGI   +    + +   I +LV+ R    K + + +AD +R+++  +GF+++D   
Sbjct: 406 FADTLGIFAQE---GEEVPEEIMELVKIREQARKDRDWDTADALREKIAQEGFVVQDTCE 462

Query: 448 PDNGQRMTR 456
             N +R  R
Sbjct: 463 GPNVKRQKR 471


>gi|229113766|ref|ZP_04243201.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228669637|gb|EEL25044.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 420

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 151/444 (34%), Positives = 221/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   E  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N++  KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419


>gi|261350960|ref|ZP_05976377.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860300|gb|EFC92598.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 448

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 168/466 (36%), Positives = 237/466 (50%), Gaps = 44/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+TL R    F+ ++ + I ++VCGPTVYD AHIG+ R  I FD + R   Y     
Sbjct: 1   MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII+R+++             I  K  +++++D  +L         R
Sbjct: 59  TVFYIQNITDVDDKIIKRSKE------TGIPAGDIARKFEKRYIEDMNKLNVTGVNLFAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+ ++I  IQ +I  G AYE  + + F   +   +G  S R I+E +    +  K  
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFEEFGKLSNRNIEELESHREIA-KTT 171

Query: 185 KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           KKNP DF LWK+     EP W SPWG GRPGWHIE +A++ +Y G  +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EI Q             W+H GFLN+ G KMSKS  NFITI ELL       + + 
Sbjct: 232 HHEAEITQMEAVSGKSPMVRYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
           A V R  +L THYR PIDF+ + L ++E  L K  +   S                 I  
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENVTSDYAPLKIAK 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
                ++ +D NT  AI A+  L  +S    D L            +    ILGI+   +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVFAVREFLDDVGFILGIDF--D 402

Query: 400 HLNKNISIAIEKLV-QERLILLKMKKFSSADYIRKQLESKGFILED 444
             +   S  +  L+   R  L   K++  +D IR QL   G+ + D
Sbjct: 403 LKDSGSSDELLTLISDVRQELRNNKQYELSDKIRNQLTDLGYEISD 448


>gi|254281834|ref|ZP_04956802.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678037|gb|EED34386.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 461

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 191/481 (39%), Positives = 253/481 (52%), Gaps = 46/481 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YNT  RK   F   DP+ + MYVCGPTVY+ AHIGNARP++VFD L R+LR  Y  
Sbjct: 3   ELALYNTFSRKKEIFTPADPNRVTMYVCGPTVYNLAHIGNARPVVVFDTLNRVLRSRY-- 60

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y RNITDIDDKIIE AR           I  +T + T ++ +D   L  L P  +P
Sbjct: 61  PNVIYARNITDIDDKIIEAARS------AGTDIKDVTDEFTAKYREDMGNLNTLIPDIEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            AT++I  M+ L++ ++   HAY A   ++F   S+  YG  S R +D+   G RV    
Sbjct: 115 HATDNIGPMLDLMERLLAGDHAYVAEGHVLFAVDSMAEYGQLSGRSLDDMLAGARVEVAS 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           +K++P DF+LWK S+  EPGWESPWGRGRPGWH+ECSAM   +LG   DIHGGG DLIFP
Sbjct: 175 YKRHPGDFVLWKPSSDDEPGWESPWGRGRPGWHLECSAMIKAHLGDTIDIHGGGRDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQSCCA   E     W+HN +L+++G KMSKS GN  T+ ELL       +S+ 
Sbjct: 235 HHENERAQSCCAYGGE-FVRYWMHNAYLDMDGEKMSKSLGNVRTVRELL-------QSYR 286

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSAL 355
             V+R A+L  HYR  + F+   L  A+  L  +           P        AV  AL
Sbjct: 287 GEVLRFALLSAHYRSELTFSESLLDNAKSALDSFYSALRQVADTAPEAVEASETAVAQAL 346

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLL-PIFNASA---------------HILGIEVCKE 399
            +DLNT  AI  LH +++   K  +   P                       L   +   
Sbjct: 347 LDDLNTPQAIAELHAVSKRLNKAEEAAIPRLKGELLAAGKLLGLLQHDPVDWLTSGLSSG 406

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                 +  IE  +  R      K F++AD IR  L S G +LED          T W++
Sbjct: 407 SGEGLSADEIEGQIAARAAAKADKDFAAADAIRDALASAGIVLEDSAA------GTTWRR 460

Query: 460 K 460
           +
Sbjct: 461 Q 461


>gi|157736506|ref|YP_001489189.1| cysteinyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|187629788|sp|A8ERE6|SYC_ARCB4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157698360|gb|ABV66520.1| cysteinyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 467

 Score =  484 bits (1246), Expect = e-134,   Method: Composition-based stats.
 Identities = 161/488 (32%), Positives = 252/488 (51%), Gaps = 54/488 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + I+++++++  EF+ I    +++YVCGPTVYD +H+G+AR  I FD+L+R+L+    
Sbjct: 2   NTLHIFDSVKKEKVEFKPIQEGKVKIYVCGPTVYDDSHLGHARSAIAFDLLHRVLKVNDY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT  +N TDIDDKII++          N  +  IT++    +  D   L  L  T +
Sbjct: 62  E--VTMTKNFTDIDDKIIKK------MYETNKTLENITNQYINAYKADMKALNILDNTIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT ++  M  +I N+I    AY+ ++ + FDTS    YG+ S +  +++    RV E 
Sbjct: 114 PKATENLEVMKEMISNLISKDVAYKTSDSVYFDTSKDNLYGTLSHKS-NDENSQARVEEN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
             K+N ADF LWK     +  +++P+G+GRPGWHIECSAM   +L         DIH GG
Sbjct: 173 QEKRNSADFALWKFEKANDVSFDAPFGKGRPGWHIECSAMIEKHLAYKDSPYQIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE AQ+ C+   +  A  W+HNGF+N+ G KMSKS GN   + ++L     
Sbjct: 233 ADLLFPHHENEAAQTRCSSG-QNLAKYWMHNGFVNINGEKMSKSLGNSFFLKDVL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             +S+   VIR  ++ THYR  + F  + L  ++  L K  +       I+         
Sbjct: 287 --KSYSGEVIRFYLMSTHYRADLSFNEEDLIASKKRLDKIYRLKKRVYGIEDSSVNKKFK 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE-- 395
             +L+AL +D+NT  A+  + ++   +    D           L+   N    +LGI   
Sbjct: 345 EDILNALNDDINTSIALSVIDEMINSANDKLDSNPKDKNLKKELISNINFIEEVLGIGGN 404

Query: 396 ----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                 +  +N++    IE L+ +R    K K F +AD +R +L S    L D  N    
Sbjct: 405 DAYAYFQFGINESTKEKIESLILKRNEAKKTKDFQTADKLRDELSSMDISLMDTVN---- 460

Query: 452 QRMTRWKQ 459
              T W++
Sbjct: 461 --GTVWEK 466


>gi|229153868|ref|ZP_04281998.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228629549|gb|EEK86246.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 420

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTNHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|15899047|ref|NP_343652.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284175285|ref|ZP_06389254.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|21264020|sp|Q97WE6|SYC_SULSO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13815580|gb|AAK42442.1| Cysteinyl-tRNA synthetase (cysS) [Sulfolobus solfataricus P2]
 gi|261600795|gb|ACX90398.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 470

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 169/487 (34%), Positives = 248/487 (50%), Gaps = 54/487 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  +I++YN+L RK+ EF  ++P+ ++MYVCGPTVYD+ HIG+ R  +VFD + R LR  
Sbjct: 1   MDFRIRVYNSLGRKLEEFGTVEPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+NITDIDDKII+++++      I    + I    T+ ++   ++L      
Sbjct: 61  GY--TVIRVQNITDIDDKIIKKSQE------IGKDWNEIVDYFTKDYLDMLSQLKVKI-D 111

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             PR T HI ++I  +Q +I  GHAY A +  + FD  + PNYG  S  K +E   G   
Sbjct: 112 IHPRVTQHIREIIDFVQRLIDKGHAYVAPSGSVYFDVDTYPNYGELSNTKKEEWNQGEEF 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                KK+  DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 --VKEKKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENE AQ+      EK    W+H+ F+ +   KMSKS GN I +NE +       
Sbjct: 230 LIFPHHENERAQTEALIG-EKWVTYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
           + W   V+R   L +HYR PIDF+ + L +A+  L +   +      +            
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRDVISEGPKFYVKDD 341

Query: 351 --------------VLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
                           +A+ ND +T +A+  +H++           R+            
Sbjct: 342 DIKVYREILNNLNNFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFETLK 401

Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
               + G+   + +     +   I+ +V  R  L +MK +  +D IR++L   G  + D 
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKIIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461

Query: 446 KNPDNGQ 452
           K+    +
Sbjct: 462 KDKSTWR 468


>gi|315635665|ref|ZP_07890928.1| cysteine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479962|gb|EFU70632.1| cysteine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 467

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 161/488 (32%), Positives = 252/488 (51%), Gaps = 54/488 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + I+++++++  EF+ I    +++YVCGPTVYD +H+G+AR  I FD+L+R+L+    
Sbjct: 2   NTLYIFDSVKKEKVEFKPIQEGKVKIYVCGPTVYDDSHLGHARSAIAFDLLHRVLKANDY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT  +N TDIDDKII++          N  +  IT++    +  D   L  L  T +
Sbjct: 62  E--VTMTKNFTDIDDKIIKK------MYETNKRLEDITNQYINAYKADMKALNILDNTIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT ++  M  +I N+I    AY+ ++ + FDTS    YG+ S +  +++    RV E 
Sbjct: 114 PKATENLEVMKEMISNLISKDVAYKTSDSVYFDTSKDNLYGTLSHKS-NDENSQARVEEN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
             K+N ADF LWK     +  +++P+G+GRPGWHIECSAM   +L         DIH GG
Sbjct: 173 QEKRNSADFALWKFEKANDVSFDAPFGKGRPGWHIECSAMIEKHLAYKDSPYQIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE AQ+ C+   +  A  W+HNGF+N+ G KMSKS GN   + ++L     
Sbjct: 233 ADLLFPHHENEAAQTRCSSG-QNLAKYWMHNGFVNINGEKMSKSLGNSFFLKDVL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
             +S+   VIR  ++ THYR  + F  + L  ++  L K  +       ++         
Sbjct: 287 --KSYSGEVIRFYLMSTHYRADLSFNEEDLIASKKRLDKIYRLKKRVYGVEDSSVNKKFK 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE-- 395
             +L+AL +D+NT  A+  + ++   +    D           L+   N    +LGI   
Sbjct: 345 EDILNALNDDINTSIALSVIDEMINSANDKLDSNPKDKNLKKELISNINFVEKVLGIGGN 404

Query: 396 ----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                 +  +N++    IE L+ +R    K K F +AD IR +L S    L D  N    
Sbjct: 405 DAYAYFQFGINESTKEKIEDLILKRNEAKKAKDFQTADEIRDELSSMDISLMDTVN---- 460

Query: 452 QRMTRWKQ 459
              T W++
Sbjct: 461 --GTVWEK 466


>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
 gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
          Length = 502

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 180/516 (34%), Positives = 249/516 (48%), Gaps = 91/516 (17%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+   F+   P  + MYVCG T YD++HIG+AR  + FDVLYR   +   E  VTYVR
Sbjct: 1   MSREKEVFRPRIPGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFPFMGYE--VTYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TDIDDKII+RA        + D    ++++   +F +D   L CLAP+ +PR + +I 
Sbjct: 59  NFTDIDDKIIKRAND------LGDDPIELSNRFCDEFHRDMASLRCLAPSLEPRVSRNID 112

Query: 131 QMIYLIQNIILHGHAYEAN-NEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEKYH 184
           Q+I +I  I+ +G+ Y  +  ++ F           +YG  S RK+D+ + G RV     
Sbjct: 113 QIIKMISQILENGYGYVLDNGDVYFSLDKFVPAFPDSYGRLSGRKLDDNRAGERVAVDDR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF+LWK +   EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG+DLIFPH
Sbjct: 173 KLNPGDFVLWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEI QS  A         W+HNGF+ ++  KMSKS GNF TI E+ E        +  
Sbjct: 231 HENEIVQSRAACHESN-VTYWMHNGFVTVDSEKMSKSLGNFFTIREVFEL-------YHP 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------------ 340
             +R  +L THYR PI+++  +L  A   L    QT                        
Sbjct: 283 LALRWFLLCTHYRSPINYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKA 342

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPI- 384
           +     +  ++ S+L +DLNT   I AL +  +                   + DLL + 
Sbjct: 343 AEIAKALRLSLRSSLADDLNTPVTIGALSEPLKLMNELLHSKKGRKDKSRYSSLDLLRLE 402

Query: 385 FNASAHILG-------------------IEVCKEHLNKNISIAIEKL---VQERLILLKM 422
              +  +LG                   +E  +    K   +  ++L   + ER      
Sbjct: 403 VEQALEVLGFSVADYSQALITQLFLSQVLEELRSKALKRAGLTEDELLLQIHERAAARAS 462

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           K F  +D IR +L S G  L D      G   T W+
Sbjct: 463 KDFGKSDEIRDKLSSLGISLMD-----GGGDETLWR 493


>gi|222444492|ref|ZP_03607007.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434057|gb|EEE41222.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
           DSM 2375]
          Length = 448

 Score =  483 bits (1245), Expect = e-134,   Method: Composition-based stats.
 Identities = 168/466 (36%), Positives = 236/466 (50%), Gaps = 44/466 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+TL R    F+ ++ + I ++VCGPTVYD AHIG+ R  I FD + R   Y     
Sbjct: 1   MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII+R+++             I  K  +++++D  +L         R
Sbjct: 59  TVFYIQNITDVDDKIIKRSKE------TGIPAGDIARKFEKRYIEDMNKLNVTGVNLFAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT+H+ ++I  IQ +I  G AYE  + + F   +   +G  S R I+E +    +  K  
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFEEFGKLSNRNIEELESHREIA-KTT 171

Query: 185 KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           KKNP DF LWK+     EP W SPWG GRPGWHIE +A++ +Y G  +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EI Q             W+H GFLN+ G KMSKS  NFITI ELL       + + 
Sbjct: 232 HHEAEITQMEAVSGKSPMVRYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
           A V R  +L THYR PIDF+ + L ++E  L K  +   S                 I  
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENVTSDYAPLKIAK 344

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
                ++ +D NT  AI A+  L  +S    D L            +    ILGI+   +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVFAVREFLDDVGFILGIDFDLK 404

Query: 400 HLNKNISIAIEKLV-QERLILLKMKKFSSADYIRKQLESKGFILED 444
                 S  +  L+   R  L   K++  +D IR QL   G+ + D
Sbjct: 405 DTGS--SDELLTLISDVRQELRNNKQYELSDKIRNQLTDLGYEISD 448


>gi|229027937|ref|ZP_04184090.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228733325|gb|EEL84154.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 420

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 219/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGNGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTELTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|229119752|ref|ZP_04249013.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228663653|gb|EEL19232.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 420

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYSNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|228925343|ref|ZP_04088439.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228931592|ref|ZP_04094498.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228983345|ref|ZP_04143558.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229089221|ref|ZP_04220502.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228694060|gb|EEL47742.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228776335|gb|EEM24688.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228828020|gb|EEM73748.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228834265|gb|EEM79806.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 420

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|166154124|ref|YP_001654242.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166154999|ref|YP_001653254.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
 gi|301335362|ref|ZP_07223606.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|165930112|emb|CAP03595.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165930987|emb|CAP06549.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis
           L2b/UCH-1/proctitis]
          Length = 497

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/489 (33%), Positives = 243/489 (49%), Gaps = 63/489 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +    
Sbjct: 22  DLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY- 79

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +V NITD+DDK +  AR++        ++          F  D   L  L     P
Sbjct: 80  -SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAYP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-E 181
            AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  +
Sbjct: 133 HATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDAD 192

Query: 182 KYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG+
Sbjct: 193 EYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSMSLLGQSLDIHAGGV 252

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+     
Sbjct: 253 DNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD----- 306

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQT 340
            + +    +R  +L  HYR  ++FT + L  +   L +                   P+ 
Sbjct: 307 -QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEV 365

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------------- 380
           +T+        +++L NDLN  S++ AL    R+   + D                    
Sbjct: 366 ATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQ 425

Query: 381 -LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+G
Sbjct: 426 HILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRG 482

Query: 440 FILEDYKNP 448
           F +ED K  
Sbjct: 483 FAIEDGKTG 491


>gi|158312230|ref|YP_001504738.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|158107635|gb|ABW09832.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
          Length = 506

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 151/520 (29%), Positives = 227/520 (43%), Gaps = 88/520 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R++  F  + P ++ +YVCGPTV    H+G+ R  + FD+L R L     
Sbjct: 1   MGLHLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTALAFDLLRRWLTQSGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N+TDIDDKII  A +         ++  + ++ T+ F      +  L PT  
Sbjct: 61  --SVTFVQNVTDIDDKIIVNADR------AGTSVWELATRQTRAFEDAYRAVGILPPTIS 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+M+ +I  ++  G AY     + F   +  +YG+ S ++            +
Sbjct: 113 PRATGHIPEMLEMIAVLVERGFAYPGAGSVWFRVGAFADYGALSHQRPAAM--HPSPESE 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK   P EP W SPWG GRPGWH+ECSAM   YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAVKPGEPSWSSPWGPGRPGWHLECSAMVGKYLGDVFDIHGGGLDLVF 230

Query: 243 PHHENEIAQSCC----------------------------ADRIEKTANIWIHNGFLNLE 274
           PHHENE AQS C                            A    + A  W+H G L   
Sbjct: 231 PHHENERAQSVCAAELAAAGAAPAAASSRGAVAAGADVPGAGGAGEMARYWMHVGLLTTG 290

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G KMSKS GN   + + L   +         V+R  +L  HYR  ++++ Q L E+    
Sbjct: 291 GTKMSKSLGNSFFVTDALAAVR-------PQVLRYHLLSAHYRSSLEYSAQTLEESAAAH 343

Query: 335 SKWPQT----------------------------STSKGIIDPAVLSALYNDLNTVSAIQ 366
            +                                +           +AL +DL    A+ 
Sbjct: 344 DRIETFVRNALDILGGPAEAAALAAEADRVAGTEAADADGAWSEFAAALDDDLGVGRALA 403

Query: 367 ALHKLARESTK------NHDLL---PIFNASAHILGIEVCKE------HLNKNISIAIEK 411
           AL  +     +      + +L     +      +LG++  ++       L   +   ++ 
Sbjct: 404 ALFGVVGRGNQVLSKTHSRELAGWVDVARRMLTVLGLDPVEQWPTAGAELRPALDGVMDV 463

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           L+  R      + +S AD IR +L + G ++ED       
Sbjct: 464 LLDLRSAARARRDYSEADSIRSRLAAAGVVIEDTPEGQRW 503


>gi|159040150|ref|YP_001539403.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|157918985|gb|ABW00413.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
          Length = 471

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 167/486 (34%), Positives = 242/486 (49%), Gaps = 53/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L  +  
Sbjct: 1   MTLRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAHGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V ++RN+TDIDDKI+ +A      +  +     I   N  +       L  L+PT++
Sbjct: 61  E--VRFIRNLTDIDDKILVKA------VEGDLPYWSIAYANELKLTAAYRALNVLSPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+M  LI  +I  GHAY A   + ++ FD  S P YG+ S +   + +     
Sbjct: 113 PRATGHIPEMQQLIAKLIDTGHAYPAADGSGDVYFDVLSWPAYGTLSNQSPTDMQPAGDA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           P++  K++P DF LWK   P EP    W SPWGRGRPGWHIECSAM   YLG  FDIHGG
Sbjct: 173 PDRC-KRDPRDFALWKGVKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGAEFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A      A  W+H+G LN+ G KM KS GN +   +L     
Sbjct: 232 GLDLTFPHHENELAQSQAA--GLPFARYWVHHGLLNIGGAKMGKSCGNSL---DLAYVDS 286

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGII 347
            G R      +R      HYR  ID++   L EA +   +             +   G +
Sbjct: 287 LGVR---PVELRYYYAAAHYRSVIDYSEDALREAAVAYRRIEGFVQRATEQIGAGQLGAV 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
             A  +A+ +DLNT +A+  LH+  R+                L    A   ILG++   
Sbjct: 344 PTAFAAAMDDDLNTSAALAVLHEAVRDGNTALTGGDDVTVRTALGQVRAMLDILGVDPLD 403

Query: 399 EHLN-----KNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                     ++   ++ LV    ++R      + +S+AD +R QL+  G ++ED  +  
Sbjct: 404 PAWTDGSGADDLRAVVDSLVALALEQRAQARSRRDWSAADAVRDQLKHAGVVVEDTPH-- 461

Query: 450 NGQRMT 455
            G R T
Sbjct: 462 -GPRWT 466


>gi|228989298|ref|ZP_04149289.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228995481|ref|ZP_04155149.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228764210|gb|EEM13089.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228770376|gb|EEM18949.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 420

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 222/444 (50%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  I+ ++  G+AYE+  ++ + T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYESEGDVYYKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQNTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A  +A+ +D NT +A+  L+ LA  + +         
Sbjct: 285 MESSTDLTDHNEKWLAEMKKFQVAFEAAMDDDFNTANAVTELYNLANHANQYLLEEHTSK 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +  F     ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 AVLEAYVKQFETLFGILGLELTKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419


>gi|329943176|ref|ZP_08291950.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|313848330|emb|CBY17333.1| putative cysteinyl-tRNA synthetase [Chlamydophila psittaci RD1]
 gi|328814723|gb|EGF84713.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci Cal10]
 gi|328915014|gb|AEB55847.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 476

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 163/486 (33%), Positives = 248/486 (51%), Gaps = 52/486 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ + +YNT  R    F   +   +R+Y CGPTVYD+AHIGN R  +  D+L R L   +
Sbjct: 8   RQNLYLYNTASRTKELFSPSNDP-VRLYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LF 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V +V NITD+DDK +  A         N ++   T+   Q F +D   L  L    
Sbjct: 65  FGYSVKHVMNITDVDDKTLAGA------CKKNISLDTYTAPFIQAFFEDVATLNILPADT 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PRAT++IPQM+  I+ ++  G AY   +N + F   + P+YG  S+ ++   +  +RV 
Sbjct: 119 YPRATHYIPQMLEAIRKLLDDGIAYTGQDNSVYFSIKAFPSYGKLSQLQLQNLQCCSRVA 178

Query: 181 -EKYHKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K+N +DF+LWK           WESP+G+GRPGWH+ECS M+   LG   DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYDKKRDGHIYWESPFGKGRPGWHLECSIMAMELLGSSIDIHAG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+   
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKG 345
              R +    IR  +L +HYR  ++FT + L      L +            P+++T   
Sbjct: 295 ---RGFSGEEIRYMLLQSHYRMQLNFTEEGLIACRQALKRLRDFISRLESPYPESATISE 351

Query: 346 IID-------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
            ID           +A+ NDLN  +A+ +L     ++    D           +L I   
Sbjct: 352 DIDRCGQLFLQDFSNAIANDLNIATALASLFDFIHQTNSLIDKSNFTQADSNYVLDIMKK 411

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LG+      L   I   + +LV+ER +  K K +  AD +R Q+ S G+++ED K+
Sbjct: 412 IDTVLGVIPFTTSLE--IPSEVAQLVEEREVARKEKNWKQADVLRNQIASLGYVIEDTKS 469

Query: 448 PDNGQR 453
               ++
Sbjct: 470 GPKVKK 475


>gi|33596886|ref|NP_884529.1| cysteinyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|33573587|emb|CAE37581.1| cysteinyl-tRNA synthetase [Bordetella parapertussis]
          Length = 551

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 214/417 (51%), Gaps = 32/417 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+      +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 68  LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGL-- 125

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 126 AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 179

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY A + ++ +      +YG  S + +D+ + G RV    
Sbjct: 180 ATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVGS 239

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 240 AKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDL 299

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK----- 295
            FPHHENEIAQ+  A      AN+W+H G L ++  KMSKS GNF TI + +        
Sbjct: 300 KFPHHENEIAQTEGAFGGA-LANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSDT 358

Query: 296 --KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------ 347
             ++      A ++R  ++  HYR P ++    L +A+  L +  Q   +          
Sbjct: 359 QAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVDW 418

Query: 348 ----DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCK 398
                 A  +A+ +D N+  A+ AL +LA E+ +           A   +LG+    
Sbjct: 419 SEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQD 475


>gi|21228013|ref|NP_633935.1| cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|24418695|sp|Q8PVQ1|SYC_METMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|20906443|gb|AAM31607.1| Cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 473

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 161/481 (33%), Positives = 238/481 (49%), Gaps = 55/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R    F+ +    + +Y CGPTVY+  HIGN R  ++ D + R L+Y   + 
Sbjct: 2   LQVYNTLTRNKETFKPLKEGEVSIYACGPTVYNMPHIGNYRTFLLADTVVRTLQYLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  ++          ++   T K + +F K    L     +  PR
Sbjct: 61  -VKLVMNITDIDDKTIRDSKA------AGMSLKDFTDKYSAEFFKGLDMLNIKRASAYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT ++  MI L Q +I  G AYE    + +  S  P+YG  S+   D  ++G  V  ++Y
Sbjct: 114 ATENVDGMIELAQKLIEKGLAYEKGGSVYYRISGFPDYGKLSKLDFDSIRIGASVDVDEY 173

Query: 184 HKKNPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L K S P E      +ESPWG+ RPGWHIECS M+ +  G   D+H GG+D
Sbjct: 174 DKDNPRDFALLKASAPEEIERSIYYESPWGKIRPGWHIECSVMAMNSFGPTLDVHIGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A  I      WIH   L +EG KMSKS GN  T+ E++E      
Sbjct: 234 LIFPHHENEIAQSEGATGI-PFVRHWIHGEHLIVEGEKMSKSKGNVFTLPEIVEM----- 287

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
             +   V+R   L  HYR+ +D++      A+    K  +T  +                
Sbjct: 288 --YGGEVVRFMFLSVHYRKKLDYSETFAENAKNNYLKLKETLDNLEFALKNVEDEPGPGD 345

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLL----PIFNA 387
                    ++     AL +D NT  AI    +L+R +       KN  +L     ++  
Sbjct: 346 LETLKTLPELENRFREALEDDFNTPKAITVFRELSRTANVYLETGKNMQVLEEIHALYKR 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +  LGI    +   + +   + +LV+ER    K+K + ++D IR++++S G+I++D K 
Sbjct: 406 FSDTLGI--FAKAGGEEVPGEVVRLVEEREEARKIKDWKTSDAIREKIKSLGYIVQDTKE 463

Query: 448 P 448
            
Sbjct: 464 G 464


>gi|328950671|ref|YP_004368006.1| cysteinyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328450995|gb|AEB11896.1| cysteinyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 481

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 163/489 (33%), Positives = 235/489 (48%), Gaps = 50/489 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL R+   F+   P  + +YVCGPTVY   H+G+AR  I +DVL R L++   
Sbjct: 1   MSLVIYNTLSRRKEAFEPATPGYVGIYVCGPTVYSDPHLGHARGPITYDVLRRWLQHLGY 60

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V +V NITD+    DD      + +  +         +  K   ++  D   L  L 
Sbjct: 61  K--VRFVSNITDVGHLTDDADEGEDKIQKRAKLERLEPMEVAEKYMWRYFDDMRDLNVLR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P   PRAT HIP+ I L Q +I  G+AYE N  + F  +  P YG  S +++DE   G R
Sbjct: 119 PDIAPRATGHIPEQIELTQRLIERGYAYERNGSVYFRAAKWPGYGRLSGKRLDELVAGAR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           V  +  K++P D+ LWK + P     W+SPWG G PGWHIECSAMS  YLG+ FDIH GG
Sbjct: 179 VAVREEKEDPRDWALWKAADPGHIMRWKSPWGEGYPGWHIECSAMSLKYLGENFDIHAGG 238

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHHE EIAQ+  A    K A  W+H+  + L G KM+KS GN + + ELL   + 
Sbjct: 239 IDLQFPHHECEIAQAEAA--GYKFARYWMHHNHVLLNGEKMAKSTGNLVVLRELLSRHE- 295

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------P 338
                   VIR  +L +HYR  +DFT + L  A    ++                    P
Sbjct: 296 ------PMVIRFYLLQSHYRSVLDFTEEGLEAARRGYTRLLDAYREARRRLEREPEGEHP 349

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
               +   ++     A+ +DL T  AI A      E  K              + +F+  
Sbjct: 350 GLEAALDRLEAEFTEAMNDDLGTPEAIAAFFTFLPELNKALAGRVGKRTLERAVRVFHEF 409

Query: 389 AH-ILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
              +LG+   +        + +S  +E L++ R    + + F+ AD +R +L   G I+E
Sbjct: 410 GEGVLGLFPPRVLEARVGGRLLSGLVELLLELREEARRERDFARADAVRARLAELGVIVE 469

Query: 444 DYKNPDNGQ 452
           D       +
Sbjct: 470 DTPQGPKWR 478


>gi|83953795|ref|ZP_00962516.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83841740|gb|EAP80909.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 486

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 209/477 (43%), Positives = 279/477 (58%), Gaps = 47/477 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK++NT  RK  +F  ID  N+RMYVCGPTVYD AH+GNARP+IVFDVL RLLR+ YG+ 
Sbjct: 4   IKLHNTKTRKREDFTPIDDKNVRMYVCGPTVYDRAHLGNARPVIVFDVLNRLLRHVYGDA 63

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN TD+DDKI  RA +         +I  IT++ TQ F+ D   +  L P H PR
Sbjct: 64  HVTYVRNFTDVDDKINARAAES------GRSIGEITAETTQWFLDDMAEVGALEPDHMPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +IPQM+ +I+++I  GHAY A   ++F   S   YG+ S R ID+   G RV    +
Sbjct: 118 ATAYIPQMVAMIEDLIAKGHAYAAEGHVLFSVESYKAYGALSGRSIDDMIAGARVEVAPY 177

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-------------- 230
           K+NP DF+LWK S    PGW+SPWGRGRPGWHIECSAM+   L K               
Sbjct: 178 KRNPMDFVLWKPSDDATPGWDSPWGRGRPGWHIECSAMADELLWKEPLRQDRLSDEAKSA 237

Query: 231 ---FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
              FDIHGGGLDL FPHHE+EIAQSCCA+  ++ A  W+HN  L +EG+KMSKS GNF T
Sbjct: 238 PHVFDIHGGGLDLQFPHHEDEIAQSCCANGTDEMARYWLHNEMLQVEGKKMSKSLGNFFT 297

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKW 337
           + +LL+      +  P  VIR  ML THYR+P+D+TV++  EAE  L           ++
Sbjct: 298 VRDLLD------QGVPGEVIRFVMLSTHYRKPMDWTVEKQVEAEATLFGYISTLESYEEF 351

Query: 338 PQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA--HILG 393
           P +      +D  P ++SAL  DL+T  A+  L K  R+  K   L             G
Sbjct: 352 PVSLEKARELDPSPEIISALARDLDTYGALGVL-KTLRDRNKASQLARDLVFLGFYSWSG 410

Query: 394 IE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           +E     +  + +++S    KL + R +  + K F+  D+++ QL+  GF +    N
Sbjct: 411 LETKVAERSDIKRDLSKLASKLEEVRTVAKETKDFTELDHLKTQLDLAGFSVRMSAN 467


>gi|281355430|ref|ZP_06241924.1| cysteinyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281318310|gb|EFB02330.1| cysteinyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 471

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 170/477 (35%), Positives = 244/477 (51%), Gaps = 46/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ +NT++RK+  FQ ID   +RMY CGPTVY+FAHIGN R  +  D+L R L Y+  
Sbjct: 1   MDLQFFNTMDRKVVPFQPIDAKLVRMYTCGPTVYNFAHIGNFRAYMFEDLLRRTLEYFGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N+TD+DDK I  +R     +         T+K  Q F +D   L        
Sbjct: 61  --PVRQVMNLTDVDDKTIRDSRAARLPL------REFTAKYKQAFFEDLKTLNIEPAEVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT+HIPQMI LI  ++  G AY+A +  I F     P+YG  ++   + Q+ G R+  
Sbjct: 113 PAATDHIPQMIRLISVLMEKGFAYQAEDKSIYFSIDKFPDYGKLAKIDRENQRSGVRIKN 172

Query: 181 EKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           ++Y K + ADF LWK       +  W+SPWG+GRPGWHIECSAMSS YLG  FDIH GG+
Sbjct: 173 DEYAKDSVADFALWKAWDENDGDVAWDSPWGKGRPGWHIECSAMSSEYLGDQFDIHTGGI 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           D +FPHHE+EIAQS  A   +K  N W+H   L + G KMSKS GNF T+ +L +     
Sbjct: 233 DNMFPHHEDEIAQSEAASG-KKWVNYWLHCAHLMVNGEKMSKSLGNFFTLRDLQQ----- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------QTST 342
            + W    IR  ++  HYR+ ++FT + L +A   L ++                 + S 
Sbjct: 287 -KGWKGREIRWVLIGAHYRKKLNFTFEALEQARETLGRFDEFFQRMREIAQTGDGTEISQ 345

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI 391
           +    + A  +A+ +DLN   A+ A+  L R + +  D           +L  F     I
Sbjct: 346 TVAGAEQAFAAAMGDDLNISEALAAMFDLQRAANRLADAGELTAAGGAEVLAAFRKFDRI 405

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           +G         +     +  L + R+   K K F  +D +R ++   GFI+ED    
Sbjct: 406 IGCFEVDAVKTEEFPAEVTALAEARIEARKAKNFVESDRLRDEIAGLGFIVEDIPGG 462


>gi|298206748|ref|YP_003714927.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
 gi|83849379|gb|EAP87247.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
          Length = 495

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 165/488 (33%), Positives = 243/488 (49%), Gaps = 44/488 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K ++IYN+L  +   F+ ID  ++ MYVCGPTVY   H+GN R  I FD+++R L++   
Sbjct: 7   KNLQIYNSLSGQKEIFKPIDEHHVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHLGY 66

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRNITD     +D  +   R    +         +  + T  F     +   L 
Sbjct: 67  K--VRYVRNITDAGHLENDAEVGEDRIAKKARLEQIEPMEVVQRYTVDFHNTLGKFNNLP 124

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQKM 175
           P+ +P AT HI + I +I++II  G AYEAN  + FD        NYG  S RK+++   
Sbjct: 125 PSIEPTATGHIVEQIEIIKDIIDKGFAYEANGSVYFDVLKYNSSNNYGILSGRKLEDMIA 184

Query: 176 GTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            TR    +  KKNP DF LWK++ P     W SPW  G PGWH+EC+ MS+ YLG+ FDI
Sbjct: 185 NTRELAAQSDKKNPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKYLGEQFDI 244

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL- 292
           HGGG+DL FPHHE EIAQ   A   +   N W+H   L L G+KM+KS GN+I  NE+  
Sbjct: 245 HGGGMDLKFPHHECEIAQGKAASGKDP-VNYWMHANMLTLNGKKMAKSTGNYILPNEMFT 303

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----------LSKWPQTST 342
                  +++   V+R +ML  +YR  +DF+ + L  +E            L   P ++T
Sbjct: 304 GDNDILSKAYLPSVVRFSMLQANYRSILDFSDEALLASEKGYFKLMTAINMLDSLPTSNT 363

Query: 343 SKGIID---PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFNA 387
           S   ++    +  +A+ +D N+   I  L    +     +D            L    NA
Sbjct: 364 SSIDVETWKNSCYTAMNDDFNSPVLIAKLFDAVKLINTVNDNKDTITKENLSILKETLNA 423

Query: 388 S-AHILGIEVCKEHL-----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
               +LG+E    +      +  +S  +E L+Q R      K F+++D IR +L      
Sbjct: 424 FVFDVLGLENANSNTATDSSSDKLSGTLELLIQLRAEARANKDFATSDKIRDELAKLDIE 483

Query: 442 LEDYKNPD 449
           L+D K+  
Sbjct: 484 LKDGKDGT 491


>gi|256833282|ref|YP_003162009.1| cysteinyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686813|gb|ACV09706.1| cysteinyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 469

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 158/483 (32%), Positives = 242/483 (50%), Gaps = 51/483 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++NT  R +  F+  +   + +YVCG TV    HIG+ R  + FDVL R L+    
Sbjct: 1   MTLRLFNTATRTVDPFEPREAGKVGVYVCGATVQAAPHIGHMRSAVAFDVLVRWLQRAGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTY+RN+TDIDDKI+ ++           A     S N Q F +    L  L PT++
Sbjct: 61  D--VTYIRNVTDIDDKILAKSAD------AKMAWWAWASLNEQAFTEAYDALGNLRPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+  MI L+  +I  GHAY ++   + FDT S P YG+ + + IDE+ + T    
Sbjct: 113 PRATGHMLDMIDLMGTLIERGHAYVSSPGNVYFDTQSWPQYGALTNQHIDERVLSTADVS 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +K++P DF LWK     EP    W +P+G GRPGWH+ECSAM+  YLG  FDIHGGGL
Sbjct: 173 DPNKRDPRDFALWKAPKEGEPSTASWPTPYGTGRPGWHLECSAMARRYLGSEFDIHGGGL 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A +W+H+ ++   G KMSKS GN + + E+L      
Sbjct: 233 DLRFPHHENEQAQSHAAGDG--FARVWMHSAWVTQGGAKMSKSLGNGLLVTEVL------ 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGI-------- 346
            +  PAPV+R A+   HYR  +++T Q L +A +   ++     +   + G         
Sbjct: 285 -KQAPAPVLRFALASVHYRSMVEWTQQSLIDAGVAWDRFTGVYRRAVETVGDKVTVPVTT 343

Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE 395
             +  A   AL +DLN    +  L+   + +               +    A   +LG++
Sbjct: 344 VELPQAFTDALNDDLNVAQGLAVLYDSVKTANTALANNNLPEATHAVLQVRAMLDVLGLD 403

Query: 396 VCKEH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +          +  ++  ++  +  R      K ++++D IR  L + G ++ED  + 
Sbjct: 404 PAQWAAPDTDSRADSALASLVQGQLDRRAQARADKDWATSDAIRDALAAAGIVVEDSPHG 463

Query: 449 DNG 451
              
Sbjct: 464 ARW 466


>gi|260435038|ref|ZP_05789008.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412912|gb|EEX06208.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 493

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 172/512 (33%), Positives = 244/512 (47%), Gaps = 75/512 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+   F  + P    +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MSLRLTNTLTRRTEPFTPLTPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+V+N TDIDDKI++RA +E      N +++ ++ +N   F +D   L  L P   
Sbjct: 61  E--VTFVQNFTDIDDKILKRAGEE------NSSMTEVSERNIASFHQDMDALGILRPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP 180
           PRAT  +  +  LI  +   G AY A  ++ F       YG  S R + EQ+     RV 
Sbjct: 113 PRATQCLDGIRALIGELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQDNAAGRVA 172

Query: 181 EKYH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +     K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGEGRPGWHIECSAMVRAELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A   +  A +W+HNG +N+ G+KMSKS GNF TI  LLE+    
Sbjct: 233 DLVFPHHENEIAQSEAATGQD-LARVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSK------WPQTS- 341
                A  +RL +L  HYR+P+DF            + L  A  L  +      W   + 
Sbjct: 288 --GVSAMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALSLGDRHGESLGWSTAAP 345

Query: 342 ------TSKG--------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
                 T+ G         ++   +SA+ +DLN+   +  L  LA+      + L     
Sbjct: 346 LTEGAMTADGGPADTPLVELEQRFISAMDDDLNSSGGLAVLFDLAKPLRALANRLERGED 405

Query: 384 ----------------IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
                           +      +LG+    E         I+  +  R      K+++ 
Sbjct: 406 AALPEPELKCLERRWQLLRHLGAVLGLRSEAEAATSLDDGTIDAAIAARKAAKAAKEYAE 465

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           AD IR +L ++G  L D         +T W +
Sbjct: 466 ADRIRDELAAQGVELIDKPGG-----VTEWIR 492


>gi|229015492|ref|ZP_04172490.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229021701|ref|ZP_04178283.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228739569|gb|EEL89983.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228745779|gb|EEL95783.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 420

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 221/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N++  KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------- 379
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 380 ----DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIGAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|15827087|ref|NP_301350.1| cysteinyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221229565|ref|YP_002502981.1| cysteinyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|13431898|sp|P57990|SYC_MYCLE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|254781687|sp|B8ZUA9|SYC_MYCLB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|13092635|emb|CAC29831.1| putative cysteinyl-tRNA synthase [Mycobacterium leprae]
 gi|219932672|emb|CAR70416.1| putative cysteinyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 473

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 152/475 (32%), Positives = 233/475 (49%), Gaps = 46/475 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T+   + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L     + 
Sbjct: 7   LRLHDTVAGAVRDFVPLRAGHVSIYLCGATVQGQPHIGHVRSGVAFDILRRWLMARGYD- 65

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A                 + + + F      L  L P+ +PR
Sbjct: 66  -VAFIRNVTDIDDKILNKAAA------AGRPWWEWAATHERAFTAAYDALDVLPPSAEPR 118

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QMI LI+ +I  GHAY   +++ FD  S P+YG  S  K+D    G  V     
Sbjct: 119 ATGHITQMIELIELLIETGHAYTGGSDVYFDVLSYPDYGQLSGHKMDYIHQGEGV--TTG 176

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK +   EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+FPH
Sbjct: 177 KRDQRDFTLWKGAKSGEPSWPTPWGRGRPGWHLECSAMARAYLGSEFDIHCGGMDLVFPH 236

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS         A  W+HNG++ + G KMSKS GN ++I  +L+  +        
Sbjct: 237 HENEIAQSRAVGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR-------P 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQ--TSTSKGIIDPAVLSAL 355
             +R  +   HYR  ++F+   L +A       E  L++      +   G + P   +AL
Sbjct: 288 AELRYYLGSAHYRSMLEFSEAALQDAVKAYVGVENFLTRVRTRVGAVGTGELTPRFAAAL 347

Query: 356 YNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK--- 403
            +DL    A+  +H    E  +  D+              A   ILG +   E       
Sbjct: 348 DDDLAVPIALAEVHHARVEGNRALDIGDHEGALTNAGAIRAMMGILGCDPLDERWESRDE 407

Query: 404 ------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                  + + +   ++ R +  + + +  AD IR +L+  G  + D  N    +
Sbjct: 408 TSAALAAVDVLVAAELESRQMAREQRNWVLADQIRDRLKDAGIEVTDTVNGPQWE 462


>gi|229182484|ref|ZP_04309735.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228600939|gb|EEK58508.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 420

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTGNMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|255349180|ref|ZP_05381187.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503717|ref|ZP_05382107.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 500

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/490 (33%), Positives = 243/490 (49%), Gaps = 63/490 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +   
Sbjct: 24  MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 82

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 83  --SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAY 134

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  
Sbjct: 135 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 194

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 195 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 254

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+    
Sbjct: 255 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQ 339
             + +    +R  +L  HYR  ++FT + L  +   L +                   P+
Sbjct: 310 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 367

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            +T+        +++L NDLN  S++ AL    R+   + D                   
Sbjct: 368 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQIETDSSVFSKQDA 427

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+
Sbjct: 428 QHILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 484

Query: 439 GFILEDYKNP 448
           GF +ED K  
Sbjct: 485 GFAIEDGKTG 494


>gi|159041398|ref|YP_001540650.1| cysteinyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157920233|gb|ABW01660.1| cysteinyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 500

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 171/475 (36%), Positives = 243/475 (51%), Gaps = 45/475 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            I ++NT  +   +F+ +     R YVCG T YD AH+G+AR  + FD+  R L Y    
Sbjct: 20  PIMVFNTATKMTEQFRLMKAGVARGYVCGLTPYDEAHVGHARVAVFFDLFRRYLEYLG-- 77

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V N TDIDDKIIE AR+E     IN     + S+  ++++     L        P
Sbjct: 78  INVRLVTNFTDIDDKIIEAARKEFGDDLINHWY-EVPSRYIKKYLDYMDALYVKRAYAYP 136

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           + T ++  M+  I  ++  G+AY A+  + FD + +PNYG FS ++I+E   G RV  + 
Sbjct: 137 KVTENVQDMVKWIDELVRRGNAYVADGSVYFDVTKVPNYGEFSGQRINELIAGARVEPEP 196

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK   P EP W+SPWG GRPGWH+EC  MSS YLG  FD HGGG DL+FP
Sbjct: 197 GKRNPLDFALWKAWKPNEPWWDSPWGPGRPGWHLECVVMSSKYLGVPFDFHGGGQDLVFP 256

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIA +     +   A  WIH G +N+ G KMSKS GN I I+++L         + 
Sbjct: 257 HHENEIAIAKVYYGLRLFARYWIHVGLVNIGGEKMSKSLGNIIPISDVLS-------KYD 309

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPA--- 350
           A  +RL  L THYR+PIDF+   +   E  L     +          ++ KG  D A   
Sbjct: 310 AEAVRLYFLNTHYRKPIDFSFSGIEAMENTLRGIYASFDYLIQLMNEASEKGTSDEAVTN 369

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
                     +AL +D NT +A+  L  L+                     LL + +  +
Sbjct: 370 DAFKFMVNFENALNDDFNTPAAVSELINLSNYINSRIVYQPEKVSKYSISQLLNVLSYMS 429

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            ILG+ + +  +N  +   I  L++ R  L + K + +AD IR++L   G +L D
Sbjct: 430 QILGV-LNRTRINPVLVDLINTLIKVRQSLRERKLYDAADLIREELGKLGIVLGD 483


>gi|154498448|ref|ZP_02036826.1| hypothetical protein BACCAP_02437 [Bacteroides capillosus ATCC
           29799]
 gi|150272516|gb|EDM99701.1| hypothetical protein BACCAP_02437 [Bacteroides capillosus ATCC
           29799]
          Length = 469

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 161/478 (33%), Positives = 229/478 (47%), Gaps = 37/478 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L     EF    P  + MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MKLYNSLSHTKEEFVPHVPGKVSMYTCGPTVYHFAHIGNLRSYIMEDVLEKFLRYDGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLACLAPT 120
            VT V NITD+     +    E   +      +  +  I    T  F  D  +L    P 
Sbjct: 60  -VTRVMNITDVGHLASDADTGEDKMVKGAQREHKTVMEIAKFYTDAFFSDCKKLNIKYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
               AT  I   I +I +++  G+AY A   I FDTS +  Y  F+    ++  +G R  
Sbjct: 119 VVQPATGMIDDYIKVITSLLEKGYAYHAGGNIYFDTSKLKQYYVFNDHDEEDLAVGVRDS 178

Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V E  +K+N ADF+LW   +  E     W+SPWG G PGWHIECS +S  YLG+  DIH 
Sbjct: 179 VEEDQNKRNKADFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMKYLGEYLDIHC 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D  FPHH NEIAQS            W+H   LN    KMSKS G F+T++ L E  
Sbjct: 239 GGIDNAFPHHTNEIAQSEAYLG-HPWCKYWMHVHHLNTSNGKMSKSKGEFLTVSLLEE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDP--- 349
               + +   V RL  L +HYR+ + F+ + L  A+    K      +    G +D    
Sbjct: 296 ----KGYDPLVYRLFCLQSHYRKGLVFSWENLDNAKAAYDKLVARVAALGEDGDVDQAAV 351

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC------- 397
                A + A+ NDLNT   + A++   +  T +     +      +LG+++        
Sbjct: 352 DAARAAFIEAVGNDLNTSLGVTAVYDALKADTNDATKRAVIADFDKVLGLDLLGRAAALK 411

Query: 398 -KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            KE      +  IE L+ +R    K K ++ AD IR QL++ G  ++D  N    +R+
Sbjct: 412 EKESAPVEGAEEIEALIAQRAQAKKEKNWAQADAIRDQLKAMGVEIKDTPNGVEWKRI 469


>gi|76789524|ref|YP_328610.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237803212|ref|YP_002888406.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|237805133|ref|YP_002889287.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|76168054|gb|AAX51062.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273433|emb|CAX10348.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231274446|emb|CAX11241.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|296436332|gb|ADH18506.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296438191|gb|ADH20352.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|297140692|gb|ADH97450.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 497

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/490 (33%), Positives = 243/490 (49%), Gaps = 63/490 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +   
Sbjct: 21  MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 79

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 80  --SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAY 131

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  
Sbjct: 132 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 191

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 192 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 251

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+    
Sbjct: 252 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 306

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQ 339
             + +    +R  +L  HYR  ++FT + L  +   L +                   P+
Sbjct: 307 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 364

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            +T+        +++L NDLN  S++ AL    R+   + D                   
Sbjct: 365 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 424

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+
Sbjct: 425 QHILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 481

Query: 439 GFILEDYKNP 448
           GF +ED K  
Sbjct: 482 GFAIEDGKTG 491


>gi|206602428|gb|EDZ38909.1| Cysteinyl-tRNA synthetase, class Ia [Leptospirillum sp. Group II
           '5-way CG']
          Length = 490

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 173/481 (35%), Positives = 238/481 (49%), Gaps = 45/481 (9%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           NTL +K        P  + MYVCG TVYD  H+G+AR   VFD+L+           V Y
Sbjct: 21  NTLTQKTELLSPRIPGEVTMYVCGVTVYDDCHLGHARSQTVFDLLH--RLLLRLGYRVRY 78

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           VRNITDIDDKII +A++          I+ IT      F +D  RL  L P  +PRAT +
Sbjct: 79  VRNITDIDDKIIRKAQE------TGRTITEITDIYIDSFQRDMRRLGILPPDKEPRATLY 132

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           +  MI LI  ++  G AY+  N++ F       YG  S +K+DE + G R+     K++P
Sbjct: 133 LDPMIRLIGTLLDKGFAYKKGNDVYFRVRKYGAYGELSHQKLDELQSGARIAADEEKEDP 192

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            DF LWK +   EP + + +G GRPGWHIECSAMS   LG+  DIHGGG+DL+FPHHENE
Sbjct: 193 LDFALWKGAKTGEPSYPAFFGEGRPGWHIECSAMSLSELGETIDIHGGGMDLMFPHHENE 252

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
            AQS  A   ++   IWIHNGF+ L   KMSKS GN   I    ET  F         +R
Sbjct: 253 RAQSESATG-KRFVGIWIHNGFVTLNEEKMSKSLGNIFRIRTFFETSPF-PEGVTREWLR 310

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSALYNDL 359
             +L THY  P+D T + L  A+  L                  +G +    L+AL +D+
Sbjct: 311 AFLLSTHYASPVDLTDENLAHAKNALDSLYLFKDRLDSMFGEAREGPMTQEFLAALCHDM 370

Query: 360 NTVSAIQALHKLAR------------ESTKNHDLLPIFNASAHILGIEVCKEH------- 400
           +T  A + LH+               E  +  D+  +F  +   LGI             
Sbjct: 371 DTPVAFRILHEAKNTLNPLLGALGDVEEDRLSDVRALFEVAKKTLGILTLPASEWIYGKG 430

Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                        +++LV ER    + K ++ AD IR++L+  G++LED  NP    R+ 
Sbjct: 431 EKTGRAESLPPEEVDRLVLEREKARREKDYARADAIRERLKKAGYLLED--NPGGLPRIR 488

Query: 456 R 456
           +
Sbjct: 489 K 489


>gi|298674878|ref|YP_003726628.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298287866|gb|ADI73832.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 486

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 154/502 (30%), Positives = 225/502 (44%), Gaps = 61/502 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             IK+YN+L  K+  F  +D   +RMY CGPTVY   HIGN R  ++ D+L R L     
Sbjct: 1   MSIKLYNSLTNKVESFIPVDDKFVRMYNCGPTVYGRVHIGNIRSFLMADLLKRFLNLEGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPIND----AISIITSKNTQQFVKDTTRLACLA 118
           +  V    NITD+     +    E       D        I  K  Q F+ D  +L    
Sbjct: 61  Q--VRQAMNITDVGHMTSDSDEGEDKLQVAADKEKLDPWKIADKYKQLFIDDLNKLNIDD 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
               PRAT HI +MI +I+ +I +G+AY +   + FD +  P YG  S   +++ +   R
Sbjct: 119 ADVYPRATQHINEMIEVIKKLIDNGYAYVSGGNVYFDITKFPEYGKLSGNVLEKLQSQER 178

Query: 179 VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK------ 229
                +K+NP DF+LW    +       W+SPWG G PGWHIECSAM+  YL        
Sbjct: 179 AVYDPYKRNPQDFVLWFSHSKYKNHIMNWDSPWGEGYPGWHIECSAMALKYLTDAFNKHF 238

Query: 230 ------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
                   DIH GG D  FPHHE EIAQS  A   +   N W+H   L +EG KMSKS  
Sbjct: 239 DSEKSTTIDIHTGGEDNKFPHHECEIAQSEGATGQK-FVNYWMHVTHLLVEGDKMSKSLN 297

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----- 338
           N  T+ ++L       + +    +R  +L THYR+ ++FT + L  ++  + +       
Sbjct: 298 NIYTLPDILN------QGYKPEAVRYVLLTTHYRQKLNFTFKNLQASQNAIDRLQELIFN 351

Query: 339 -----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------- 380
                      +       +    +  L NDLN   AI  L +  +   K+         
Sbjct: 352 LKHIGNESGDFEAEKFAEKVKDDFIKELENDLNIAGAIGVLFEAVKTINKSLTNIGQQEA 411

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             LL +      +LG+    E     +   I++L+++R      K F++AD IR  L+ +
Sbjct: 412 DILLDMLKDVDKVLGVLDFSEQAP--LEKEIQELIEQRDRARDSKDFATADKIRDNLKKR 469

Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
           G  L D          T WK++
Sbjct: 470 GIHLIDT------PEGTIWKRE 485


>gi|255507398|ref|ZP_05383037.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525826|emb|CBJ15307.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296435406|gb|ADH17584.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296439123|gb|ADH21276.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis E/11023]
          Length = 497

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/490 (33%), Positives = 243/490 (49%), Gaps = 63/490 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +   
Sbjct: 21  MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 79

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 80  --SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAY 131

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  
Sbjct: 132 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 191

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 192 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 251

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+    
Sbjct: 252 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 306

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQ 339
             + +    +R  +L  HYR  ++FT + L  +   L +                   P+
Sbjct: 307 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 364

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            +T+        +++L NDLN  S++ AL    R+   + D                   
Sbjct: 365 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQIETDSSVFSKQDA 424

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+
Sbjct: 425 QHILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 481

Query: 439 GFILEDYKNP 448
           GF +ED K  
Sbjct: 482 GFAIEDGKTG 491


>gi|149280305|ref|ZP_01886427.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
 gi|149228994|gb|EDM34391.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
          Length = 486

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 153/495 (30%), Positives = 232/495 (46%), Gaps = 46/495 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL RK   F+ ++  N+ +YVCGPTVY   H+GN R  I FD+++R L+Y 
Sbjct: 1   MNTGLQLYNTLTRKKEVFEPLNAPNVGLYVCGPTVYSDVHLGNCRTFISFDLIFRYLKYS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      +R   +                I  K T  F         
Sbjct: 61  GYK--VRYVRNITDAGHLEGDRDEGDDKFAKRAKLEQLEPMEIVQKYTLGFHDVLRMFNT 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I +I+ II +G+AYEA+  + FD        NY   + R +++ 
Sbjct: 119 LPPSIEPTATGHIIEQIEMIKEIISNGYAYEADGTVYFDVEKYSKSYNYTILTNRNLEDM 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  K+   DF LW ++ P     W SPWG G PGWHIECSAMS+ YLG+ F
Sbjct: 179 LANTRELGGQDQKRGRLDFALWIKAKPETLMRWASPWGEGFPGWHIECSAMSAKYLGEEF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL   HH NEIAQS      +  A  W+H   L + G +MSKS GN     +L
Sbjct: 239 DIHGGGMDLAATHHTNEIAQSEACSHKQP-AKYWMHTNMLTVNGARMSKSAGNGFLPEQL 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            +       + +    ++  ML  HYR  +DF+ + L  +E    +     +    + P+
Sbjct: 298 FKGDHVLLEKGFSPMTVKFFMLQAHYRSTLDFSNEALDASEKGFRRLMNAVSLLDKLVPS 357

Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIF 385
                         + A+ +D N+   I  L +  R     +D            L  + 
Sbjct: 358 EASDFDIRPIAENCVKAMNDDFNSPVVIAELFEAVRIINTVYDGKGRISAASLEELKKLM 417

Query: 386 NAS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           N     I G++  ++  N  ++  ++ ++  R    + K ++++D IR  L+S G  L+D
Sbjct: 418 NDFVFEIFGLK-DEDSSNVELNSVLDMVIDLRKTAKENKDYATSDKIRLGLQSMGIQLKD 476

Query: 445 YKNPDNGQRMTRWKQ 459
            K        T W +
Sbjct: 477 SK------EGTTWSK 485


>gi|229170941|ref|ZP_04298542.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228612481|gb|EEK69702.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 420

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 150/444 (33%), Positives = 219/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+   L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|109894892|sp|Q3KKR0|SYC_CHLTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 477

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 162/490 (33%), Positives = 243/490 (49%), Gaps = 63/490 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +   
Sbjct: 1   MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 60  --SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  
Sbjct: 112 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 171

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 172 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+    
Sbjct: 232 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQ 339
             + +    +R  +L  HYR  ++FT + L  +   L +                   P+
Sbjct: 287 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            +T+        +++L NDLN  S++ AL    R+   + D                   
Sbjct: 345 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 404

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+
Sbjct: 405 QHILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 461

Query: 439 GFILEDYKNP 448
           GF +ED K  
Sbjct: 462 GFAIEDGKTG 471


>gi|167044639|gb|ABZ09311.1| putative tRNA synthetases class I (C) catalytic domain protein
           [uncultured marine crenarchaeote HF4000_APKG7F19]
          Length = 463

 Score =  482 bits (1240), Expect = e-134,   Method: Composition-based stats.
 Identities = 187/480 (38%), Positives = 253/480 (52%), Gaps = 54/480 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++TL    TE +  D   +R+Y+CG TVYD AHIG+AR +IVFDVL R L     + 
Sbjct: 2   MQIFDTLGNTKTELKFSD--KVRIYLCGVTVYDDAHIGHARTIIVFDVLRRFLESQ--KI 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKIIERA QE        +   + +K T+ +  D  RL     T  P+
Sbjct: 58  LVEFVQNFTDVDDKIIERALQEKT------SPLELAAKYTKNYFDDFDRLNVKRATMYPK 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  M  LI N++   +AY   N + F  S    YG  S++K D+   G RV     
Sbjct: 112 ATEHIEDMQNLISNLVDKKYAYITKNGVYFSVSKFTEYGKLSKKKTDDLISGARVAVDEE 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK S   EP W+SPWG+GRPGWHIECSAMS  YLG+ F+IHGGG DLIFPH
Sbjct: 172 KNNPIDFALWKFSN-SEPSWDSPWGKGRPGWHIECSAMSLKYLGENFEIHGGGRDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS       +   IW+H G + + G KMSKS GN  ++N +LE       +W  
Sbjct: 231 HENEIAQSES-FMSNQFTKIWMHVGMITINGEKMSKSLGNVKSVNHVLE-------NWGP 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDP------ 349
            +IRL  L   Y +PID++ + L E    L          +  + +  + I +       
Sbjct: 283 NIIRLFCLSGSYSKPIDYSEKFLKENITKLRQIESCYYELRLAEGTDEETIAEKLVKECR 342

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVC 397
               SAL NDLNT  A+ A +KL RE                 +LP F   + ILGI++ 
Sbjct: 343 DEFDSALNNDLNTPLALTAFYKLIREVNSLAAEEKITQTSAEIVLPEFERMSGILGIQIL 402

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K  ++      I +++++R      K +  AD IR ++  K  I  D+KN       T W
Sbjct: 403 K--VSDAEKNEINQMIKKRDEYRMQKNYEQADSIRAKIAEKNIIFFDHKNK------TTW 454


>gi|315607013|ref|ZP_07882019.1| cysteine--tRNA ligase [Prevotella buccae ATCC 33574]
 gi|315251394|gb|EFU31377.1| cysteine--tRNA ligase [Prevotella buccae ATCC 33574]
          Length = 515

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 151/521 (28%), Positives = 232/521 (44%), Gaps = 72/521 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M++ + IYNTL R    F+ +   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++ 
Sbjct: 1   MEQTLLIYNTLSRSKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIER----ARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     +      + E  +         +    T ++      L  
Sbjct: 61  GYK--VRYVRNITDVGHMEHDADDGDDKIEKKARLEQLEPMEVAQYYTNRYHTAMNALNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P+AT HI +   L++ I+ +G+AYE+N  I FD         YG  S R ++  
Sbjct: 119 LPPSIEPQATGHIIEQEELVKQILDNGYAYESNGSIYFDIEKYNKDHKYGILSGRSLENI 178

Query: 174 KMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWG-------------------RGR 212
              +R +     K++ ADF LWKR+ P     W S +                     G 
Sbjct: 179 VNESRSLAGVGEKRHQADFALWKRAMPEHIMRWHSVFKYKTGSYYENKKAKYRQITIEGF 238

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWH EC+AM   YLG  FDIHGGG+DL+FPHHE EIAQ+  A + ++    W+HN  + 
Sbjct: 239 PGWHCECTAMGRKYLGNHFDIHGGGMDLVFPHHECEIAQA-VASQGDQMVRYWMHNNMIT 297

Query: 273 LEGRKMSKSNGNFITINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           + G+KM KS GNFIT+ +    +     +++    IR  +L  HYR  +DF+   L  +E
Sbjct: 298 INGQKMGKSLGNFITLEQFFTGSHDSLEQAYSPMTIRFFILSAHYRSTVDFSNDALKASE 357

Query: 332 ILLSKWPQTSTSKG-----------------IIDPAVLSALYNDLNTVSAIQALHKLARE 374
             L +     +                     +      A+ +D  T   I  L +    
Sbjct: 358 KGLERLMNGLSDLDRVPVSDTCDEVTDRFVKQLRQRCYDAMNDDFQTQLVISYLFEACHV 417

Query: 375 STKNHD------------LLPIFNASA-HILGIEVCKEHLNKNISIA----IEKLVQERL 417
                D            L       A  +LG++      N+    A    ++ ++  R 
Sbjct: 418 VNTLLDHKAHICADCLKELAETMRLFAFDLLGLKPENGDNNEAREEAYGKVVDMVLSLRA 477

Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                K ++++D IR  L   GF ++D K+         W+
Sbjct: 478 KAKADKDWTTSDKIRDALADAGFEVKDTKD------GVTWR 512


>gi|229136936|ref|ZP_04265563.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228646474|gb|EEL02681.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 420

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIQAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|229194480|ref|ZP_04321283.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228588946|gb|EEK46961.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 420

 Score =  481 bits (1239), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|269796450|ref|YP_003315905.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098635|gb|ACZ23071.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 477

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 243/487 (49%), Gaps = 54/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + +F  +    + +YVCG TV    HIG+ R  + FDVL R L     
Sbjct: 1   MSLRLYDTATRDVRDFVPLVEGEVGVYVCGATVQGLPHIGHMRSAVAFDVLARWLARTG- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT VRN+TDIDDKI+ ++          +      + + + F      L  L PT++
Sbjct: 60  -HRVTLVRNVTDIDDKILAKSAA------AGEPWWAWAATHERAFTHAYDALGNLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+  M+ L++ ++  GHAY+A   ++ FD  S   YGS + +++++    T   +
Sbjct: 113 PRATGHVTDMVALMERLVAAGHAYQAGEGDVYFDVRSWEPYGSLTNQRLEDLTPATEEVD 172

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              KK+P DF LWK + P EP    W +P+GRGRPGWH+ECSAM+  YLG  FDIHGGGL
Sbjct: 173 AGVKKDPRDFALWKAAKPGEPETASWPTPFGRGRPGWHLECSAMAQRYLGDTFDIHGGGL 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A +W+H+ ++   G KMSKS GN + + E+L+  +  
Sbjct: 233 DLRFPHHENEQAQSRAA--GYDFARLWMHSAWVTQGGAKMSKSLGNGLLVTEVLDRTR-- 288

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSK 344
                A V+R A+   HYR  +++T + + EA+    ++              P      
Sbjct: 289 -----AAVLRFALAGVHYRSMLEWTAETVAEADTTWDRFVGFVDRATERVGTVPAEEVVA 343

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIE 395
             +    ++A+ +DLN  +A+ A+H+  +                 L +  +   +LG++
Sbjct: 344 AALPAGFVAAMDDDLNVSAALAAVHEHLKAGNTALAGGDDAAARTELVLVRSMLDVLGLD 403

Query: 396 VCKEHLNKNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                 +   + +   L       ++ R      K F+++D IR +L   G ++ED    
Sbjct: 404 PAAWSTSSTSTSSTTALDALVTCELEARAQARAAKDFATSDAIRDRLARAGIVVEDS--- 460

Query: 449 DNGQRMT 455
             G R T
Sbjct: 461 TLGARWT 467


>gi|291297887|ref|YP_003509165.1| cysteinyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
 gi|290567107|gb|ADD40072.1| cysteinyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
          Length = 480

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 161/487 (33%), Positives = 249/487 (51%), Gaps = 55/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  RK+ +F    P  + +Y+CG T+    HIG+ R  + +D++    ++   
Sbjct: 1   MSLRLYDTGTRKVRDFVPRVPGKVSIYLCGLTLQGPPHIGHLRNGVNYDIMCSWFQHRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRN+TDI+DK++ ++R++            I+ +N ++   D   L    PT++
Sbjct: 61  D--VTYVRNVTDIEDKVLAKSREQDRPWW------AISFENERRLAADYEALGVRPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+P+M+ LI  +I  GHAY   N ++ F   S P YG+ S RK ++  +     +
Sbjct: 113 PRATGHVPEMMDLIAELINKGHAYAPGNGDVYFSVESYPEYGALSHRKPEDM-LCPDDGD 171

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++P DF LWK + P EP    W +P+GRGRPGWH+ECSAMS  YLG  FDIHGGG 
Sbjct: 172 ESVKRDPRDFALWKAAKPGEPADSSWNTPYGRGRPGWHLECSAMSRRYLGDAFDIHGGGT 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE+AQS  A       N W+HN  +NL G KMSKS GN +++  L      G
Sbjct: 232 DLMFPHHENELAQSRAA--GLDFTNFWVHNNMVNLSGTKMSKSLGNVLSVEAL------G 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGII 347
            R +    IR  +   HYR  ID++   LTE+     +               +T  G +
Sbjct: 284 ERGFRPVEIRYYLAAPHYRSVIDYSDAILTESATSYRRLENFVSRAAERFGHDATEGGAL 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCK 398
                +AL +D  T +A  A+H++ RE     D               A   +L ++   
Sbjct: 344 CADFTAALDDDFGTPAAFAAIHEVTREGNAALDSSDDAAARGAAASVRAMLGVLNLDPLS 403

Query: 399 EHLNKN--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
               +         +   +  ++++R    K K +++AD IR QL   G ++ED      
Sbjct: 404 RQWTETGGDDLTPVVDSLVNLVLEQRQQARKNKDYATADAIRDQLSRAGLVIED------ 457

Query: 451 GQRMTRW 457
           G + +RW
Sbjct: 458 GPQGSRW 464


>gi|319952072|ref|YP_004163339.1| cysteinyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
 gi|319420732|gb|ADV47841.1| cysteinyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
          Length = 493

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 232/487 (47%), Gaps = 41/487 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + +K+YN+L  +   F +I    I MYVCGPTVY   H+GN R  + FD+++R  ++  
Sbjct: 6   TQHLKVYNSLTGQKEPFTSIHEGAIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D      +    +         +  + T  F     +   L
Sbjct: 66  YK--VRYVRNITDAGHLENDAEDGEDKIAKKARLERIEPMEVVQRYTVDFHNILQKFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ I+  G AYE N  + FD        NYG  S RK+++  
Sbjct: 124 PPSIEPTATGHIIEQIEIIKEILEKGFAYEVNGSVYFDVPKFNETHNYGKLSGRKLEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K +P DF LWK++ P     W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 184 ANTRELAAQDDKHSPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKYLGETFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+  ++ +    N W+H   L L G+KM+KS GN I  +E+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQAEASNGVSP-VNYWLHANMLTLNGKKMAKSTGNNILPDEIF 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
             T     +++   V+R  M+  HY   +D +   L  +E    K  +   +   ++   
Sbjct: 303 SGTNPLLSKAFTPTVVRFFMMQAHYTSILDLSNDALLASEKGFLKLMEALNTIHKLETNS 362

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
                          A+ +D NT + I  L +  +      +            L   FN
Sbjct: 363 SSDFDFNAWQQKCYDAMNDDFNTPTLIAHLFEAVKHINAIKEGKESISEMDKALLNNTFN 422

Query: 387 AS-AHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           A    ILG+E   +  +    +S  +  L+Q R      K F+++D IR QL   G  L+
Sbjct: 423 AFIFDILGLEDKNDANSDTDKLSGVVALLIQLRKEARDNKDFATSDIIRDQLAELGIQLK 482

Query: 444 DYKNPDN 450
           D K    
Sbjct: 483 DGKEGTT 489


>gi|332669126|ref|YP_004452134.1| cysteinyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
 gi|332338164|gb|AEE44747.1| cysteinyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
          Length = 478

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 160/495 (32%), Positives = 238/495 (48%), Gaps = 60/495 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T  R + +F  +    + +Y+CG TV    H+G+ R  + FDVL R LR     
Sbjct: 5   SLRLYDTATRTVRDFVPLTAGEVGIYLCGATVQAPPHVGHVRSSVAFDVLVRWLRRTG-- 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT VRN+TDIDDKI+ +A          +        N + F      L  L PT++P
Sbjct: 63  HRVTLVRNVTDIDDKILAKAAA------AGEPWWAWAMTNERAFTSAYDALGVLPPTYEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-VPE 181
           RAT H+P M+ L+  ++  GHAY A   ++ FD  S P+YG+ + +++D+        P+
Sbjct: 117 RATGHVPAMVELMTRLVERGHAYAAGEGDVYFDVRSFPDYGALTNQRVDDMVPAPDGAPD 176

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              KK+P DF LWK + P EP    W++P+GRGRPGWH+ECSAM+  YLG  FDIHGGGL
Sbjct: 177 GVVKKDPRDFALWKAAKPGEPETAAWDTPYGRGRPGWHLECSAMARRYLGDGFDIHGGGL 236

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A  W+HNG++   G KMSKS GN + ++ +L+  +  
Sbjct: 237 DLRFPHHENEQAQSHAA--GYPFARYWLHNGWVTQGGTKMSKSLGNGLLVDVVLQQVR-- 292

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
                A V+R AM    YR  +++T   L EAE    +                      
Sbjct: 293 -----AVVVRYAMTTVQYRSMLEWTDDTLREAEAAWDRLAGFVERATERVGAVDAEEVAA 347

Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIE 395
             +      A+ +DLN   A+  +H+  R+         +           A   +LG++
Sbjct: 348 APVPQDFADAMDDDLNVPKAMAVVHEWLRQGNSALADDALDDVRATLVGLRAMLDVLGLD 407

Query: 396 VCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
                           K +   +   V+ R      + F++AD IR +L + G ++ED  
Sbjct: 408 PGSPQWATRGGDERYAKALDALVAGQVEARAAARAARDFATADAIRDRLTAAGVVVEDSP 467

Query: 447 NPDNGQRMTRWKQKP 461
                    RW  +P
Sbjct: 468 T------GARWSLRP 476


>gi|330834076|ref|YP_004408804.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566215|gb|AEB94320.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 466

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 158/482 (32%), Positives = 238/482 (49%), Gaps = 53/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL R+I  F   +P ++RMYVCGPTVYD  HIG+ R  + FD + R LR      
Sbjct: 2   LRVFNTLGRRIDSFIPNEPHSVRMYVCGPTVYDEVHIGHGRTFVSFDAISRYLRLKGFN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+NITDIDDKII +A+       +  + + ++   T+ +++    L        P+
Sbjct: 61  -VIRVQNITDIDDKIINKAKS------VGKSWNEVSEYYTKSYLEMINLLKVKI-DIHPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            ++HI ++I  +Q +I  GHAY AN  + FD  + P YG  S  + +E   G        
Sbjct: 113 VSSHIKEIIDFVQGLIDRGHAYVANGSVYFDVDTYPKYGELSNIRKEEWDQGE--EIVKE 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK   P EP W+SPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL+FPH
Sbjct: 171 KKNPYDFALWKAYKPGEPFWDSPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGIDLVFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +     W+H  FL ++  KMSKS GN I + E +         +  
Sbjct: 231 HENERAQTESITN-DTWVKYWMHVAFLTIKKEKMSKSKGNIIPLKEAIA-------KYGP 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------SK 344
             +R   L +HYR PI+++   L ++   L +     +                    ++
Sbjct: 283 STLRYWFLSSHYRNPIEYSDDVLEQSAKSLQRLKDAVSILRKIILEGPQHYAKESEIKTQ 342

Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFNASAHI 391
             I  A     +A+ +D NT +A+ A+H+LA          ++       L  F     +
Sbjct: 343 AEIFGAILNFDNAMEDDFNTANALTAIHELASIVFTKLQYSQDVLGAIMALDGFRKFNDV 402

Query: 392 LGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             + +         IS  I  +++ R  L + + +  +D IR+ L   G  + D K    
Sbjct: 403 FAVMDEEFSSEMDRISSIINSVIEIRNYLRERQMYELSDKIRESLMKAGIKVLDSKEGST 462

Query: 451 GQ 452
            +
Sbjct: 463 WR 464


>gi|320101049|ref|YP_004176641.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753401|gb|ADV65159.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 484

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 166/493 (33%), Positives = 233/493 (47%), Gaps = 56/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+Y+TL R + E + ++P  ++MYVCGPTVYD+ HIG+ +  +++D   R L     
Sbjct: 6   PDVKVYDTLSRGLKELRPVEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLSLRGY 65

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITDIDDKII R+ +E          + I  + T+ ++    +L      H 
Sbjct: 66  --HVVHVMNITDIDDKIIRRSHEE------GRDWNEIVEEYTRDYISALEKLNVK-VDHH 116

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR + HI ++I  IQ +I  G+AY A +  + FD     +YG  S R+      G     
Sbjct: 117 PRVSEHIDEIIRFIQGLIDKGYAYVAPSGSVYFDVDKYEDYGRLSGRE-SRDTWGQEQEF 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF LWK + P EP WESPWG+GRPGWHIECS MSS YLG  FDIHGGG DLI
Sbjct: 176 LSEKKNPYDFALWKAAKPGEPYWESPWGKGRPGWHIECSVMSSRYLGSRFDIHGGGTDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS      +   +IW+H+G + +   KMSKS  N + + E  +        
Sbjct: 236 FPHHENERAQSEAYFGSKPWVSIWMHSGLVMVGKDKMSKSLKNIVPLKEAFD-------K 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
           W    +RL  L THYR+P+ F  + L  A  L  +    +   G +              
Sbjct: 289 WGPMPLRLWYLSTHYRKPLYFFEEALENAVKLYERLVTAAQLLGKLSREASGLHYARDED 348

Query: 351 -------------VLSALYNDLNTVSAIQALHK----LARESTKN------HDLLPIFNA 387
                           AL +D NT  A+ A+++    L R+   N         + +   
Sbjct: 349 LKVFSQLVSLHRRFHEALSDDFNTAEAMAAVNEYLTILFRDIQHNPRHLLVSTSIKLLRE 408

Query: 388 SAHILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
              +LG+   +          +   I  LV  R  L K   +  +D IR  L   G  L 
Sbjct: 409 FNSVLGVLDKELEAVGEAEALLDSVIGILVNVRRELRKRGLYDLSDAIRSDLSKIGIQLM 468

Query: 444 DYKNPDNGQRMTR 456
           D     +  R+ R
Sbjct: 469 DKGLETSWIRVRR 481


>gi|228937392|ref|ZP_04100038.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228976848|ref|ZP_04137260.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228782818|gb|EEM30984.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228822225|gb|EEM68207.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
          Length = 420

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|116622355|ref|YP_824511.1| cysteinyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|122254163|sp|Q021Y7|SYC_SOLUE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116225517|gb|ABJ84226.1| cysteinyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 466

 Score =  481 bits (1238), Expect = e-133,   Method: Composition-based stats.
 Identities = 160/485 (32%), Positives = 231/485 (47%), Gaps = 50/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL +++ EF     + +RMY CGPTVYDFAHIGN R     D+L ++LR    + 
Sbjct: 3   LRFYNTLSQQVEEFTPASDNTVRMYTCGPTVYDFAHIGNFRTFTFVDLLRKVLRANGFQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V NITD+DDKII  A  +H       ++   T   T+ F++D   L    P     
Sbjct: 62  -LNHVMNITDVDDKIIRNAVAQH------QSLEQYTKIYTEAFLEDCKMLRLERPERIAP 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT HI  M+  I+ +    H Y ++  + F  +S P YG  S         G RV  ++Y
Sbjct: 115 ATEHIHDMVSAIERLGDSQHTYASDGSVYFKIASFPGYGKLSHNDFSGNLAGARVDVDEY 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K +  DF LWK     EP W++  G GRPGWHIECS M+  YLG+  DIH GG+DL+FP
Sbjct: 175 EKADARDFALWKTPKEGEPFWDTTIGPGRPGWHIECSVMAIKYLGETLDIHAGGIDLVFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS      +  +  W+H  FL +EG+KMSKS GN+ T+ +L+       + + 
Sbjct: 235 HHENEIAQSESLTG-KLFSRFWLHAEFLMVEGQKMSKSLGNYYTLRDLV------AKGYE 287

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------TSTSKGI 346
              IR  +    YR+ ++FT+  L  A I + +                     +     
Sbjct: 288 PESIRYLLASVPYRKSLNFTLDGLKAARIAIERLRNFKRRLETEPFAEGLSAILAERTAQ 347

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
              A +  L  DLNT  A+ ++ +  R+     D            L        I  + 
Sbjct: 348 ASQAFIGGLNEDLNTAEALASVFEYVRDLNSAMDSGEFRAGNTTAALEFLARFDSIFDVL 407

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                  +     I+  +  R    K + F+ AD IR QL ++G ILED K+        
Sbjct: 408 KPTAKAGELSDAEIDAQIAARAAAKKSRDFALADQIRDQLLAQGIILEDTKS------GV 461

Query: 456 RWKQK 460
           RWK+K
Sbjct: 462 RWKRK 466


>gi|189502029|ref|YP_001957746.1| hypothetical protein Aasi_0619 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497470|gb|ACE06017.1| hypothetical protein Aasi_0619 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 495

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 160/504 (31%), Positives = 234/504 (46%), Gaps = 59/504 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YN+L R+   F   +P  + MYVCGPTVY  AH+G+AR  + FDV+ R L + 
Sbjct: 1   MHNSLQVYNSLTRQQETFTPTNPPYVGMYVCGPTVYGPAHLGHARCYVTFDVIQRYLTHL 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD+     D      +    +   N     +  +    F +D   L  
Sbjct: 61  GYQ--VRYVRNITDVGHLERDADEGADKIAKQASLENVEPMEVVQRYMNSFHRDMALLNV 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
             P  +P+A+ HIP+ I +IQ I+  G AYE N  + F+  +     +YG  S R ID+ 
Sbjct: 119 QPPNIEPQASGHIPEQIRMIQEIMNQGLAYEVNGSVYFNIMAYREKYHYGKLSGRNIDDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
             GTRV   +  KK P DF LWK++       W SPWG G PGWHIEC+A+++ YLG  F
Sbjct: 179 LAGTRVLAGQQEKKFPLDFALWKKANNTHIMRWPSPWGEGFPGWHIECTALATKYLGSCF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL+FPHHE E+AQS  A      A  W+HN  + +  +KMSKS GN IT++EL
Sbjct: 239 DIHGGGMDLLFPHHECELAQSQAAQHT-TLAKYWLHNNLVTINDQKMSKSLGNSITLDEL 297

Query: 292 LE-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------T 340
            +       R++   V+R  +L  HYR  + FT + L  AE    K              
Sbjct: 298 FQGIHPLLDRAYSPMVLRFFILQAHYRSTLSFTNEALQAAEKGYLKLINGLKTTKDMKYA 357

Query: 341 STSKGIIDPAVLS-----------ALYNDLNTVSAIQALHKLARESTK-----------N 378
               G +D A+++           A+ ND NT   I  L  L +                
Sbjct: 358 PIGLGNVDEAMVAQVEKHMAACYQAMNNDFNTAKLIAELFHLLKFIHALAYRQVDFYKLG 417

Query: 379 HDLLPIFNA-----SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
             +              ILG+    + +  ++   I   ++      + K +   + +R 
Sbjct: 418 EKVFETLKKTYIYILEDILGLREDYKAVPADLLSVI---LKVYSQAKQQKNYEQIEMLRA 474

Query: 434 QLESKGFILEDYKNPDNGQRMTRW 457
           +L   G I++D        R   W
Sbjct: 475 ELRVLGIIVQDT------TRGVEW 492


>gi|133909679|emb|CAL99791.1| Cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 452

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 162/466 (34%), Positives = 229/466 (49%), Gaps = 48/466 (10%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
            EF         +YVCG TV    HIG+ R  + +DVL R L +   +  V  VRN+TDI
Sbjct: 2   REFHPRLAGVASIYVCGATVQGVPHIGHVRGGLNYDVLRRWLVHNGYD--VRLVRNVTDI 59

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DDKI+ +A                 + + + F     RL CL P+  PRAT HI QMI L
Sbjct: 60  DDKILTKAAD------AGRPWWEWATAHERAFESAFDRLGCLPPSALPRATGHITQMIEL 113

Query: 136 IQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
           +Q +I  GHAY A  ++ F  +S   +YG  S +++DE + G        K++P DF LW
Sbjct: 114 MQRLIDKGHAYAAGGDVYFSVASYAEHYGRLSGQRLDEVQQGESTA--SGKRDPRDFTLW 171

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
           K + P EP W +PWG GRPGWH+ECSAMS++YLG  FDIHGGGLDL+FPHHENE+AQS  
Sbjct: 172 KAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVFPHHENELAQSTA 231

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A      A  W+HN ++ + G KMSKS GN + I  +L+          AP IR  ++  
Sbjct: 232 AGDG--FARYWMHNAWVTMSGEKMSKSLGNTVAIPAILQRA-------AAPEIRYYLVAP 282

Query: 315 HYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSALYNDLNTVSAI 365
           HYR  I+++   L EA     +                 G +     +A+ +DL+T  AI
Sbjct: 283 HYRSTIEYSEPALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAAAMDDDLSTPQAI 342

Query: 366 QALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK----------NIS 406
             +H   RES    D                   ILG++   E               +S
Sbjct: 343 AVVHNAIRESNAALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADTRGADDAAHHALS 402

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             +  ++Q+R      + F++AD +R +L++ G  +ED  +     
Sbjct: 403 ELVGSMLQQRQQARAERDFATADAVRDRLQACGIAVEDTPDGPLWT 448


>gi|238061386|ref|ZP_04606095.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883197|gb|EEP72025.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 471

 Score =  480 bits (1237), Expect = e-133,   Method: Composition-based stats.
 Identities = 168/486 (34%), Positives = 235/486 (48%), Gaps = 53/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + +F   +     +Y+CG T+    HIG+ R  + +DVL R L     
Sbjct: 1   MTLRLYDTATRSVRDFVPREAGKAGVYLCGLTLQGPPHIGHLRSGVNYDVLRRWLLARGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V ++RN+TDIDDKI+ +A      +        I   N +        L  L PT++
Sbjct: 61  E--VRFIRNLTDIDDKILVKA------VEQGRPFWSIAYANERALAAAYGMLNVLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+M  LI  +I  GHAY A   + ++ FD +S P YG+ S +  D  +     
Sbjct: 113 PRATGHIPEMHELIARLIDTGHAYPATDGSGDVYFDVASWPAYGALSGQSPDAMQAADDA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           PE+  K +P DF LWK + P EP    W SPWGRGRPGWHIECSAM   YLG+ FDIHGG
Sbjct: 173 PER-GKHDPRDFALWKGAKPNEPADAYWPSPWGRGRPGWHIECSAMCWRYLGEEFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENEIAQS  A      A  W+H+G L + G KM KS GN +   +L     
Sbjct: 232 GLDLTFPHHENEIAQSQAA--GLPFARYWVHHGLLGIGGAKMGKSLGNAL---DLTYIDS 286

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGII 347
            G R      +R      HYR  +D+T   L E      +                 G +
Sbjct: 287 LGVR---PIELRYYYAAAHYRSHVDYTEDSLREWASGFRRIEGFVQRAAERVGPGELGEL 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
               ++A+ +DLNT +A+  L ++ R+                L    A   ILGI+   
Sbjct: 344 SAGFVAAMDDDLNTSAALAVLQEVLRDGNTALAAGDDVTVRTALGSTRAMLDILGIDPLD 403

Query: 399 EHLN-----KNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           E         ++   ++ LV    ++R      K + +AD +R QL+  G ++ED     
Sbjct: 404 EAWTGGGRADDLRGVVDSLVALALEQRAQARSRKDWVAADAVRDQLKLAGVVVEDTP--- 460

Query: 450 NGQRMT 455
            G R T
Sbjct: 461 QGPRWT 466


>gi|307594505|ref|YP_003900822.1| cysteinyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307549706|gb|ADN49771.1| cysteinyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 491

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 175/490 (35%), Positives = 242/490 (49%), Gaps = 50/490 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT  + + +   + P   R+YVCG T YD  H+G+AR  + +D+  R L Y   E  V
Sbjct: 12  VYNTASKNLEKITLLRPGLARIYVCGLTPYDSMHVGHARTFVFYDIFRRYLEYLGVE--V 69

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +V N TDIDDKII RARQE     IN     + S+  ++F     RL        P+ T
Sbjct: 70  RFVTNFTDIDDKIINRARQEFGGELINRWY-EVPSRYIKEFFDAMDRLYVKRAYAYPKVT 128

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +I  M+  IQ ++    AY + +  + FD + +P YG FS +KI++   G RV  +  K
Sbjct: 129 ENINDMLKWIQELVSKNLAYVSPDGSVYFDITKVPRYGEFSGQKIEDLIAGARVEPEPGK 188

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +NP DF LWK  +  EP W SPW  GRPGWH+EC  MSS YLG  FDIHGGG DLIFPHH
Sbjct: 189 RNPLDFALWKSWSEGEPWWNSPWSPGRPGWHLECVVMSSKYLGVPFDIHGGGQDLIFPHH 248

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIA +     I+  A  WIH G + + G+KMSKS GN I I E+L       R +   
Sbjct: 249 ENEIAIARVYFGIDYFARYWIHVGLVTIRGQKMSKSLGNIIPIMEVL-------RKYDGE 301

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILL---------------------SKWPQTSTSK 344
           V+RL   MT YR+P+DF    L +    L                      +  +  +  
Sbjct: 302 VLRLYYAMTQYRKPMDFDPDALDQVRNSLMSVYAAYDMLTEAINEAPDTGDRDNELLSKV 361

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAR-------------ESTKNHDLLPIFNASAHI 391
                +   +L ND+NT  A+ AL   AR                   + L  F+  A+I
Sbjct: 362 NEFVNSFEESLNNDINTSGAVAALMDFARYIASTVIYNTQHYSRNALTNALTAFSDLANI 421

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           LGI + +  L  ++   I+ L++ R  L   K F  AD IR +L   G ++ D  N    
Sbjct: 422 LGI-LNRTRLPPSLVSLIDTLIRIRAQLRARKMFDVADEIRNELSKLGVVVSDVGNKTYW 480

Query: 452 ----QRMTRW 457
                ++T+W
Sbjct: 481 YIDRDKITQW 490


>gi|268679683|ref|YP_003304114.1| cysteinyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617714|gb|ACZ12079.1| cysteinyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 466

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 164/480 (34%), Positives = 249/480 (51%), Gaps = 46/480 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++++++   F  I+ + +++YVCGPTVYD AH+G+AR  I FD+L R+L     + 
Sbjct: 1   MFIYDSVQKQKVNFIPIEENKVKLYVCGPTVYDDAHLGHARSAIAFDLLRRVLIALGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V+N TDIDDKII++            ++ +IT+   +++  +   L       +P+
Sbjct: 60  -VTFVKNFTDIDDKIIKK------MHESGKSLEVITTYYIERYKAEMHALHVNDADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  I ++I  I +++    AY  ++ I FDTS    Y S S R ++E+    RV +K  
Sbjct: 113 ATETIGEIIAFIDSMLQQKVAYATSDGIYFDTSKDSKYLSLSHRFVEEEASQARVEQKEE 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGLDL 240
           KK+  DF LWK S   EP + +P+G GRPGWHIECSAM   +L        DIH GG DL
Sbjct: 173 KKDQKDFALWKFSKENEPSYPAPFGIGRPGWHIECSAMIEKHLASDGDFQIDIHAGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENE AQ+ C    E  A  W+HNGF+ + G KMSKS GN   + + L        
Sbjct: 233 LFPHHENEAAQTRCKSHQE-LAKYWMHNGFVTISGEKMSKSLGNSFFLKDALAI------ 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAV 351
            +   V+R  +L THYR   +F  + L   +  L K  +          S +       +
Sbjct: 286 -YSGEVLRFYLLATHYRANFNFAEEDLLNTKKRLDKLYRLKKRVFETTPSEASSSFKETM 344

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-----------LGIEV---- 396
           L AL +DLN   A+ +L ++   + +  D  P   A   I           LGI +    
Sbjct: 345 LEALSDDLNISKALASLDEMLSYANEMLDANPKDKAFKAITCANLQWIEALLGIGLYNPY 404

Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
              +  +++   IAIE+L+ +R    K K F++AD IR +LE+K   L D  N    +++
Sbjct: 405 HYFQMGVSEEEKIAIERLLNQRAEAKKAKDFATADEIRHKLEAKQIQLMDTVNGTQWEKV 464


>gi|228905887|ref|ZP_04069784.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228853702|gb|EEM98462.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 420

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 149/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L   +   IE L+Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419


>gi|88855742|ref|ZP_01130405.1| cysteinyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815066|gb|EAR24925.1| cysteinyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 476

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 169/486 (34%), Positives = 238/486 (48%), Gaps = 50/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T    + + +  +   + +YVCGPTV    HIG+ R  +V+D+  R L Y   
Sbjct: 1   MTIRLYDTRSASLVDLKPREAGKVGIYVCGPTVQAAPHIGHLRSALVYDIWRRWLTYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT VRN+TDIDDKI+ +A  +  +    +    +  +   +F      L  L PT++
Sbjct: 61  D--VTLVRNVTDIDDKILNQA-VDAAAEGSAEQWWALAYRIELEFTAGYNELGILPPTYE 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT +I +M  LI ++I  GHAY A   + ++ FDT S P YG  +R+K+D+       
Sbjct: 118 PRATANISEMRELIASLIERGHAYAAADDSGDVYFDTQSWPTYGELTRQKLDDMVAAADA 177

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++  DF LWK S P EP    W SPWG GRPGWHIECSAMS  YLG  FDIHGG
Sbjct: 178 DPRA-KRDSRDFALWKGSKPTEPTSASWSSPWGDGRPGWHIECSAMSRRYLGSGFDIHGG 236

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS      +  A  W+HNG +N+ G+KMSKS GN +   ELL+  +
Sbjct: 237 GLDLRFPHHENELAQSSAL--GDDFAQHWVHNGMVNVNGQKMSKSLGNSVFARELLDAAR 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------ST 342
                    V+R  +   HYR  ID+T   L EAE    +                    
Sbjct: 295 -------PIVVRYLLGAAHYRSTIDYTDNSLAEAEAAFERLEVFIERATRRLRDTRFDVA 347

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
           +   +  A   A+ +DL    A+  +H   R      D               A A +LG
Sbjct: 348 NINEVPEAFGEAMDDDLAVPQALAVVHDTIRAGNAALDDGDLAAVATARSQVVAMAQVLG 407

Query: 394 IEVCKEHLNKN--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           I                  +S  +EKL+++R      K F+ AD IR +L + G  +ED 
Sbjct: 408 INPLDPRWGSERSEPAVAALSALVEKLIEDRNTARSAKDFAVADRIRDELSAAGITVEDD 467

Query: 446 KNPDNG 451
               + 
Sbjct: 468 STGSHW 473


>gi|94971018|ref|YP_593066.1| cysteinyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|122986084|sp|Q1IJF8|SYC_ACIBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|94553068|gb|ABF42992.1| cysteinyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 495

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 173/514 (33%), Positives = 241/514 (46%), Gaps = 79/514 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  KI  FQ ++ + +RMY CGPTVYD+ HIGN R  IV D L R L+    + 
Sbjct: 3   LELFNTLSGKIETFQPLEDNEVRMYACGPTVYDYGHIGNFRTFIVVDTLRRFLKQSGYK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V N+TD+DDKII  A ++         +   T+K  + F++D   L    P     
Sbjct: 62  -LKHVMNVTDVDDKIIRNAARD------GKTVQEYTAKYRKAFLEDCEALNIEHPELLVN 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT+HI +M   I+ +     AY+  +    F  +  P YG  S++       G RV  ++
Sbjct: 115 ATDHIDEMARFIKRMEDLDVAYKTEDGSYYFRIAKFPEYGKLSKKDFAGMNDGARVDVDE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K N  DF LWK   P E  W++  G GRPGWHIECS MS  YLG+ FDIH GG DL+F
Sbjct: 175 YEKDNARDFALWKAPKPGEAKWDTVIGSGRPGWHIECSIMSMKYLGESFDIHLGGEDLVF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +K AN W+H+ FL +EG+KMSKS GNF T+ +L+          
Sbjct: 235 PHHENEIAQSESVTH-KKFANFWVHSRFLLVEGQKMSKSLGNFFTVRDLILM------GH 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDP------ 349
               IR  ++   YR+ ++FT   L +A I + +             ++G  D       
Sbjct: 288 KPSSIRFLLMSVPYRKQLNFTFDGLKQAAISVDRLRNFKRRIQTEPFAEGTNDKIGLMAN 347

Query: 350 ----AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI 394
                + +AL NDLNT  A+  +  L R+     D           LL        I  +
Sbjct: 348 ETITKIKAALDNDLNTAEALAPIFDLVRDVNAAADAGEVKRGDVASLLEALQKFDEIFAV 407

Query: 395 E--------------VCKEHLNKNISIA--------------IEKLVQERLILLKMKKFS 426
                            +E     IS                +E LV E     K K F 
Sbjct: 408 LNDDDSGKVKFAVDWANQEGKADKISAETAEMAKAAGLSDEKVEALVAEHSAARKAKDFK 467

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +D IR +L   G ILE+ K+        RWK+K
Sbjct: 468 RSDAIRAELMESGIILENTKD------GVRWKRK 495


>gi|260437953|ref|ZP_05791769.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809704|gb|EFF68909.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 472

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 161/479 (33%), Positives = 238/479 (49%), Gaps = 36/479 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K+  +NTL RK+ +F       + MY CGPTVY FAHIGN R  I+ D+L + LRY 
Sbjct: 1   MENKVYFFNTLTRKVEQFIPNVDGKVAMYTCGPTVYHFAHIGNLRSYIMEDILEKTLRYV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLAC 116
             +  V  V NITD+     +    E   +      +  +  I    T  F  D  +L  
Sbjct: 61  GYD--VKRVMNITDVGHLTSDADTGEDKMLKGAKREHKTVMEIAKYYTDAFFDDCRKLNI 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P     ATN IP+ I +++ ++   +AY A   + FDTS + +Y  FS +   E  +G
Sbjct: 119 KRPDVVEPATNCIPEFINMVKVLLEKDYAYIAGGNVYFDTSKLDDYYVFSSQSEKELMVG 178

Query: 177 TRVP--EKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            R    E  +KKN ADF+LW    +    E  W+SPWG G PGWHIECS +S  +LG+  
Sbjct: 179 VRDDVSEDINKKNKADFVLWFTKSKFDNQELKWDSPWGVGYPGWHIECSCISMKHLGEYM 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D IFPHH NEIAQS       K  N W H   LN +  KMSKS G F+T++ L
Sbjct: 239 DIHCGGVDNIFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNDKSGKMSKSKGEFLTVSLL 297

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIID 348
            E      + +   V RL  L +HYR+P++F+ + L       +K  +      + G +D
Sbjct: 298 EE------KGYNPLVYRLFCLQSHYRKPLEFSYEVLDNMTTAYNKLIKKIGELKADGSVD 351

Query: 349 PA--------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
                        A+ +DLNT SAI  ++ + R    +   L +  +   +L +++ K+H
Sbjct: 352 EEAFAGFRNKFEDAICSDLNTSSAITVIYDVLRSDINDVTKLELIKSFDEVLSLDLLKDH 411

Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                  ++  +   I   ++ER    K K F+ AD IR +L +KG  ++D +     +
Sbjct: 412 GNDKESSVDSELKEYILAKIEERKAAKKEKDFAKADAIRDELAAKGIQIKDTREGTVWE 470


>gi|325287202|ref|YP_004262992.1| cysteinyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
 gi|324322656|gb|ADY30121.1| cysteinyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
          Length = 494

 Score =  480 bits (1236), Expect = e-133,   Method: Composition-based stats.
 Identities = 164/488 (33%), Positives = 236/488 (48%), Gaps = 42/488 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + IK+YN+L  K  EF+ I+  +I MYVCGPTVY   H+GN R  + FD+++R  ++  
Sbjct: 6   NQTIKVYNSLSGKKEEFKPINDGHIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHLG 65

Query: 62  GEKCVTYVRNITD----IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD    +DD      +    +         +  + T  F     +   L
Sbjct: 66  YK--VRYVRNITDAGHLVDDADEGEDKIAKKARLEQIEPMEVVQRYTVDFHNTLQKFNFL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I+ II  G AYE N  + FD    +   +YG  S RK+++  
Sbjct: 124 PPSIEPTATGHIIEQIEIIKEIIEKGFAYEVNGSVYFDVVEFNKTNDYGILSGRKLEDMI 183

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  KKNP DF LWK++ P     W SPWG G PGWH+EC+AMS+ YLG+ FD
Sbjct: 184 ANTRELAAQSDKKNPQDFALWKKAEPEHIMRWPSPWGDGFPGWHLECTAMSTKYLGETFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+  ++      N W+H   L L G+KMSKS  N I  NE+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQAQASNGSAP-VNYWLHANMLTLNGKKMSKSTDNNIYPNEIF 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
                   +++    +R  M+  HY   +D +   L  +E    K  +  TS   I+   
Sbjct: 303 SGDNNILSKAFSPSAVRFFMMQAHYTSILDLSNDALLASEKGYLKLMEAITSLKAIETGS 362

Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLP-IFN 386
                          A+ +D N+   I  L +  +              ++ +LL    N
Sbjct: 363 KTEFDVAAWQQKCYDAMNDDFNSPILIAHLFEAVKHINLIKDGKETITKEDKELLENTLN 422

Query: 387 ASA-HILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
             A  ILG+    E  N N   +   +  L+Q R      K F+ +D IR QL + G  L
Sbjct: 423 TFAFDILGLTGVNEDANGNSEKLEEVVNLLIQLRNDARSNKDFALSDQIRDQLLAIGIQL 482

Query: 443 EDYKNPDN 450
           +D K+   
Sbjct: 483 KDGKDGTT 490


>gi|110639787|ref|YP_679997.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|123058501|sp|Q11PK9|SYC_CYTH3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110282468|gb|ABG60654.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
          Length = 497

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 162/497 (32%), Positives = 241/497 (48%), Gaps = 53/497 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K+ +YNTL RK   F+ I   ++ MYVCGPTVY   H+G+AR  I FD+++R L++   
Sbjct: 4   EKLVVYNTLTRKKEVFEPIHAPHVGMYVCGPTVYGEGHLGHARSAITFDIVFRYLQHL-- 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRNITD+     +    E                I  + T+ +     +L  L 
Sbjct: 62  KYQVRYVRNITDVGHLEHDADEGEDKIAKKAKLEKVEPMEIVQRYTEYYHDALRKLNVLP 121

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----YGSFSRRKIDEQK 174
           P+ +P A+ HIP+ I +++ I+  G+AYE    + FD     N    YG  S R +++  
Sbjct: 122 PSIEPTASGHIPEQIRMVEEILSSGYAYENTGSVYFDVEKFTNDKNKYGHLSGRILEDLI 181

Query: 175 MGTRVPEKYH-KKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            GTR  +  H KK+ ADF LWK ++P     W+SPWG+G PGWH+ECSAMS+ YLG+ FD
Sbjct: 182 SGTRSLDGQHTKKSSADFALWKLASPEHIMKWDSPWGKGFPGWHLECSAMSTKYLGETFD 241

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL+FPHHE EIAQS  A++ E  A  W+HN  + + G+KM KS GNFIT+NEL 
Sbjct: 242 IHGGGMDLMFPHHECEIAQSVAANKKEP-AKYWLHNNMITINGQKMGKSLGNFITLNELF 300

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------- 337
                   +++    IR   L  HYR  +DF+   L  A     K               
Sbjct: 301 TGNHTLLEQAYSPMTIRFFTLQAHYRSTLDFSNDALKAANKAFRKVMNGMKMLNSLEYST 360

Query: 338 ------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLL--P 383
                    +     I       + +D NT   I +L  L ++        K+  +L   
Sbjct: 361 DIVEQDQALNDEINKIIADCYKGMSDDFNTAITIASLFNLIKKINVFYLQQKSTAVLSKE 420

Query: 384 IFNASA--------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            F             +LG+    + +  N    I+ L+       + K++   D IR   
Sbjct: 421 TFEHMKTSYTTLVHDVLGLV---DEVAVNPEGLIKGLLDLYKEAKENKQYDKVDQIRAYF 477

Query: 436 ESKGFILEDYKNPDNGQ 452
           + +G  ++D K+  +  
Sbjct: 478 KQQGLAIKDMKHGIDWA 494


>gi|182414301|ref|YP_001819367.1| cysteinyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|254781688|sp|B1ZSX8|SYC_OPITP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|177841515|gb|ACB75767.1| cysteinyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 457

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 165/461 (35%), Positives = 256/461 (55%), Gaps = 31/461 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K++++L R + E Q   P  + R Y CGPTVY  AHIGN R  +V D+L R+L   +G 
Sbjct: 3   LKLFDSLTRNLRELQPSHPDGVFRFYNCGPTVYAPAHIGNFRTFVVNDILRRMLELEFGA 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +VRN+TD+DDK I+RAR E         ++ +T + T +F  D   L CL P  +P
Sbjct: 63  PKVKHVRNLTDVDDKTIKRARDE------GRPLADVTRQWTDKFHADCAALNCLPPHIEP 116

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-- 180
            AT HI + + +I  ++  G+AY A +  + F  SS  +YG  SR K  E ++G+ +   
Sbjct: 117 TATGHIREQVDMIDCLMQKGNAYRAADGSVYFKVSSFSDYGRLSRVKERELQIGSALAGK 176

Query: 181 ----EKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +   K++ +DF LWK   P   E  W+SPWGRGRPGWHIECSAMS  +LG+  D+H
Sbjct: 177 SQAVDADEKEDGSDFALWKAHKPDDGENSWDSPWGRGRPGWHIECSAMSKKHLGETIDLH 236

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+DL+FPHHENEIAQS C + + + +  W H+  L ++G+KMSKS GN  T+++L   
Sbjct: 237 TGGVDLLFPHHENEIAQSECCNGV-QFSRHWYHSEHLLVDGKKMSKSLGNLYTLDDL--- 292

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------ID 348
                + +    +R A+L  H R+ ++FT+  L  AE  L+       +         + 
Sbjct: 293 ---KQKGFSPMAVRYALLSGHPRKQLNFTLDSLHAAEKALATLRAYRATLAAGGAAHHVF 349

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK-NISI 407
             V++AL +DLNT +A+ AL  +        D+   F+     LG+++      K  +  
Sbjct: 350 APVIAALEDDLNTPAALGALFTIVNRGKGEADV-ESFDRVMFALGLKLDAPTAPKAEVPA 408

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            +  L ++R    + K F++AD +RK++ + G+ + D K+ 
Sbjct: 409 EVTALAEKRWAAKQAKDFATADALRKEIAAAGWSMLDRKDG 449


>gi|193083780|gb|ACF09463.1| cysteinyl-tRNA synthetase [uncultured marine crenarchaeote
           KM3-47-D6]
          Length = 462

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 181/483 (37%), Positives = 252/483 (52%), Gaps = 54/483 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++TL    TE +  D   + +Y+CG TVYD AHIG+AR +IVFDVL R L       
Sbjct: 1   MQIFDTLRNMKTELEFSD--KVGIYLCGVTVYDDAHIGHARTIIVFDVLRRFLESEG--I 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII+RA QE        +   + +K T+ +  D   L     T  P+
Sbjct: 57  TVEFVQNFTDVDDKIIDRANQEK------ISPLELAAKYTKNYFDDFDGLNVKRATVYPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A  HI  M  LI +++   +AY   N + F  S    YG  S++KID+   G RV     
Sbjct: 111 AIEHIEDMQNLISSLVDKKYAYVTKNGVYFSVSKFTEYGKLSKKKIDDLISGARVSVDEE 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF LWK S   EP W+SPWG+GRPGWHIECSAMS  YLG+ F+IHGGG DLIFPH
Sbjct: 171 KNNPIDFALWKFS-ESEPSWDSPWGKGRPGWHIECSAMSLKYLGENFEIHGGGRDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS       + A IW+H G + + G KMSKS GN  ++N +L+       +W  
Sbjct: 230 HENEIAQSESFIP-NQFAKIWMHVGMITINGEKMSKSLGNVKSVNHVLD-------NWGP 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID------------ 348
            +IRL  L   Y +PID++ + L E    L +    + +   ++G+ D            
Sbjct: 282 NIIRLFCLSGSYSKPIDYSEKFLKENITKLRQIESCYYELRLAEGVGDEIIAEKLVKECR 341

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVC 397
               SAL NDLNT  A+   +KL RE                 +L  F   + ILG ++ 
Sbjct: 342 EKFDSALNNDLNTPLALTTFYKLIREVNSLAAEEKITQTSAEIILQEFERMSEILGFQIL 401

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K  ++      I +++++R      K +  AD IR ++  K  I  D+KN       T W
Sbjct: 402 K--VSDAEKNEINQMIKKRDEYRMKKNYEQADNIRAEIAEKNVIFVDHKNK------TTW 453

Query: 458 KQK 460
            ++
Sbjct: 454 VKQ 456


>gi|223939279|ref|ZP_03631160.1| cysteinyl-tRNA synthetase [bacterium Ellin514]
 gi|223892111|gb|EEF58591.1| cysteinyl-tRNA synthetase [bacterium Ellin514]
          Length = 471

 Score =  480 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 166/485 (34%), Positives = 244/485 (50%), Gaps = 53/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++NTL R + EF  +DP    + +Y CGPTV+D AHIGN R  +  D+L R L +   
Sbjct: 3   LKLFNTLSRSVEEFVPLDPAGKRVGLYCCGPTVHDSAHIGNFRTFVFADLLRRYLEFRGY 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD++DKII R R        N  +   TSK    F  D   L CL P++ 
Sbjct: 63  --AVQHVMNITDVEDKIIARVRT------ANTTLKEYTSKYEAAFFADLKSLGCLPPSNT 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN----YGSFSRRKIDEQKMGT 177
           PRAT  I ++I LI+ +I  G AY+A +  + F           YG   +   +E ++G 
Sbjct: 115 PRATEFIGEIISLIEKLIERGIAYKAPDGSVYFSIDKYRGCGCTYGQLLKLNFEEMRVGE 174

Query: 178 RV-PEKYHKKNPADFILWKRSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           RV  ++Y K++ ADF LWK   P +    W SPWG GRPGWHIECSAMS   LG  FD+H
Sbjct: 175 RVKSDEYAKESVADFALWKARVPEDGTVFWPSPWGEGRPGWHIECSAMSMKLLGPSFDLH 234

Query: 235 GGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
            GG DLIFPHHE+EIAQS  A      ++    W+H   L +EG+KMSK  GNF  + +L
Sbjct: 235 LGGEDLIFPHHEDEIAQSEGAGLQPSGQRFVKHWMHGAHLLVEGKKMSKRLGNFFVLGDL 294

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------ 339
                   + +    IR  +L +HYRE  +FT+  L  A   L++  +            
Sbjct: 295 ------TAKGFTGREIRYLLLTSHYRETFNFTLDGLQGARTALARIDECLIKLKETAGST 348

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNAS 388
            +++   +  A   AL  DLN   A  A+ +   ++ ++     +           +   
Sbjct: 349 QASADEKMVNAFTQALDKDLNIAGAWGAIFEWVSDTNRHLAENSLTPQQAAAALAAWQKI 408

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +LG+     ++   +   I  L++ R    K K F  +D IR +L++KG+++ED    
Sbjct: 409 DAVLGVGA---NVEAEVPAEIAALLEARQAARKAKDFKRSDAIRDELKAKGWVIEDTPKG 465

Query: 449 DNGQR 453
              +R
Sbjct: 466 PRLKR 470


>gi|309812587|ref|ZP_07706332.1| cysteine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308433438|gb|EFP57325.1| cysteine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 483

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 155/497 (31%), Positives = 240/497 (48%), Gaps = 57/497 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R++ +F+ ++P  + +Y+CG T     HIG+ R  + FDVL   L     
Sbjct: 1   MSLQIFDTATRELRDFEPVEPGKVGIYICGLTTQGSPHIGHLRFAVAFDVLRNWLT-RGH 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT VRN+TDIDDKI+ ++ +        +     +  + ++       L    PT++
Sbjct: 60  GYDVTLVRNVTDIDDKILRKSAE------AGEPWFAWSYLHERETSDALDILGVQRPTYE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT H+  M+ L++ +I  GHAY A   + ++ FD  S   YG+ +R+K+D+ +     
Sbjct: 114 PRATGHVTDMVELMELLIERGHAYPAADGSGDVYFDVKSFDEYGALTRQKLDDMEDAADA 173

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P DF LWK     EP    W +PWG GRPGWH+ECSAM+  +LG  FDIHGG
Sbjct: 174 DPRA-KRDPRDFALWKGRKADEPASANWPTPWGEGRPGWHLECSAMARRWLGDTFDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHHENE AQS  A      A  W+HNG++ L G KMSKS GN +++ EL +T +
Sbjct: 233 GIDLRFPHHENEQAQSRAAGLG--FARYWMHNGWVTLSGEKMSKSLGNTLSVTELTKTVR 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTST 342
                    V+R  +   HYR  I++T   L EA   + +                    
Sbjct: 291 -------PLVLRYYLGSVHYRSTIEYTSDSLAEANAAVERIEGFLRRALGEDAVLTSADL 343

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
           +   +  A ++ + +DLN   A+ A     RE     D         L     A   +LG
Sbjct: 344 ADVELPEAFVATMDDDLNVSGALAACFDAIREGNTAIDEADVRRVEELALQVAAMTDVLG 403

Query: 394 IEVCKEHLNKN-----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +       + N           +   ++ LV++R      K F++AD IR QL   G ++
Sbjct: 404 VNPLDPKWSGNGSADGDETKRALGALVDALVEQRKTARAAKDFATADIIRDQLADAGVVV 463

Query: 443 EDYKNPDNGQRMTRWKQ 459
           ED  +          ++
Sbjct: 464 EDTPDGARWSVARTGRK 480


>gi|327311486|ref|YP_004338383.1| cysteinyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947965|gb|AEA13071.1| cysteinyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 480

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 161/474 (33%), Positives = 237/474 (50%), Gaps = 44/474 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++IYNT  +++ +F    P     YVCG T YD  H+G+ R  + FD+  R L     +
Sbjct: 6   PLRIYNTATKRMEQFSVRTPGIASGYVCGITPYDSVHVGHGRVYVFFDMFRRYLERLGLQ 65

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V N TDIDDKII RAR+E  +  +      +  +   ++     RL        P
Sbjct: 66  --VRLVVNFTDIDDKIINRAREEFGADSVKRW-REVPERYISEYFDVMRRLYVKPAYAYP 122

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T ++  M+  I+ ++  G AY A +  + F+   +P YG FS ++I+E   G RV  +
Sbjct: 123 RVTENVEDMLGWIKALVDKGFAYVAPDGSVYFEVGKVPRYGEFSGQRIEELVAGARVEPE 182

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK  +P EP W+SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIF
Sbjct: 183 PGKRNPLDFALWKSWSPGEPWWDSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIF 242

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L         +
Sbjct: 243 PHHENEIAIARAMFGVDYFARYWIHVGYLTVRGEKMSKSLGNIITLREVLS-------KY 295

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
               +RLA  M+HYR+P++F+ + L  AE ++          G                 
Sbjct: 296 SGEALRLAYAMSHYRKPMEFSFELLDRAEDMVKTLYTAYDELGQAVADAGEGGSEPVVEP 355

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
                     AL +D +T  A Q L+  AR                   D+L  +   A 
Sbjct: 356 FYKYVEGFYEALNDDFSTNEAAQRLYDAARYIISTVLHKIDKISREAVLDVLSKYVEMAD 415

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LG+ + +  + K +  A++ LV+ R  L + +++  AD IR++L + G  L D
Sbjct: 416 VLGL-LERREVPKEVQEAVKALVEARARLRQERQYQLADQIRERLSALGVDLHD 468


>gi|329765327|ref|ZP_08256907.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329138233|gb|EGG42489.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 463

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 184/486 (37%), Positives = 252/486 (51%), Gaps = 60/486 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ +TL   +          +++Y+CG TVYD +HIG+AR +IVFDVL + L     E 
Sbjct: 1   MKLQDTLSNSVQTLD--ISKEVKIYLCGVTVYDESHIGHARTIIVFDVLRKYLESKGIE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++N TD+DDKII RA+ E      N     I+SK  + + KD   L     ++ P+
Sbjct: 58  -VNFIQNFTDVDDKIINRAKLE------NTTAEQISSKYIENYYKDFDGLNVKRASNYPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +   I+ +I    AY + N + F  S    YG  S++KIDE + G R+     
Sbjct: 111 ATEHIKDIENFIEKLIQKDIAYVSKNGVYFSVSKFSQYGKLSKKKIDELQSGARIEVDEA 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK S  ++P W+SPWG+GRPGWHIECSAMS  YLG+ FDIHGGG DLIFPH
Sbjct: 171 KKDPLDFALWKFSN-VKPIWDSPWGKGRPGWHIECSAMSIKYLGENFDIHGGGRDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS      ++ A IW+H G + + G KMSKS GN  +I  +L+       +W  
Sbjct: 230 HENEIAQSESFT-SKQFAKIWMHVGMVTINGEKMSKSLGNIRSIKHVLD-------NWGP 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------TSKGIID 348
            VIRL  L  HY +PID++ + L E    L+KW Q                    K II+
Sbjct: 282 NVIRLFCLSGHYSKPIDYSEELLKE---NLTKWRQAEICFYELIHANNENSNTDIKSIIE 338

Query: 349 P---AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGI 394
                  +AL +DLNT  A+ +  KL +E                 ++P       ILG+
Sbjct: 339 KTSREFNNALESDLNTHLALSSFFKLIKEINYLAAEEKISKKHAESVIPELERMMKILGL 398

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            + K  +       I  ++ ER  L K KKF  AD IR +L      L D+K        
Sbjct: 399 VIPK--ITHEEKQEINNMISEREQLRKEKKFQDADKIRDRLNEMNIELIDHKGK------ 450

Query: 455 TRWKQK 460
           T W +K
Sbjct: 451 TIWARK 456


>gi|297621589|ref|YP_003709726.1| Cysteinyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
 gi|297376890|gb|ADI38720.1| Cysteinyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
          Length = 484

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 153/485 (31%), Positives = 242/485 (49%), Gaps = 50/485 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K +NT+ R    F+ I  + + +Y CGPTVY+FAHIGN R  +  D+L R L+++  E
Sbjct: 14  PLKFFNTITRSKDPFKPISGNRVSLYTCGPTVYNFAHIGNYRTYMFEDLLRRTLKFFGYE 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V N+TD+DDK I  A         N ++   T    + F +D   L      H P
Sbjct: 74  --VEQVMNLTDVDDKTIRGA------TEQNVSLDAYTKPFKEAFFEDIRTLNIEPAEHYP 125

Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
            AT++I QMI +I+ ++  G AY  A+  + +   +   YG  S  KIDE K G      
Sbjct: 126 AATDYIDQMIAMIEKLLEKGAAYRGADGSVYYAIETFKRYGCLSHLKIDELKSGASDRVA 185

Query: 180 PEKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K N ADF+LWK   P    +  W+SP+G+GRPGWH+ECS M+   LG+  D+H G
Sbjct: 186 SDEYEKDNVADFVLWKSYDPERDGKIYWDSPFGKGRPGWHLECSTMAMQILGETIDLHCG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D +FPHHENEIAQS      +    +W+H+  L +E +KMSKS GNF T+ +LLE   
Sbjct: 246 GVDNMFPHHENEIAQSEACSG-QTFVKMWLHSEHLIIENKKMSKSLGNFFTLRDLLE--- 301

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------T 340
              + +    +R  +L THY+  ++FT + L   +  L +                    
Sbjct: 302 ---KGYSGKQVRYILLQTHYKTQLNFTFEGLEAVKHSLQRLQDFVYRLQGVTGRETHHAL 358

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
                       + L +DLN   A+ +L++L R+     D           +L +     
Sbjct: 359 DALLDQALLGFANGLADDLNISVALASLYELVRDVNGLIDQGKLGEGDANRVLELLKRFN 418

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+   +          I+ L  +R+   + K +S AD +R  ++S+G+++ED+ +  
Sbjct: 419 SVLGVIDFEMKEESIPDDLIQAL-DDRIAARQNKDWSEADRLRDYIQSRGYVIEDFPSGS 477

Query: 450 NGQRM 454
             +++
Sbjct: 478 RLKKV 482


>gi|254822713|ref|ZP_05227714.1| cysteinyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 469

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 151/477 (31%), Positives = 224/477 (46%), Gaps = 46/477 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  +   ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ 
Sbjct: 64  CD--VAFIRNVTDIDDKILNKAAA------AGRPWWEWAATYERAFSAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QMI L+  +I   HAY A  ++ FD  S P YG  S  KID+   G     
Sbjct: 116 EPRATGHITQMIELMHRLIETEHAYAAGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGAA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK + P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+
Sbjct: 175 -TCKRDQRDFTLWKAAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  LL+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPALLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVL 352
                +R  +   HYR  ++F+   L +A              +        G   P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSETALQDAVKAYVGVEEFLHRVRVRVGGVEPGQWTPKFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN- 402
            AL +DL   +A+  +H    E  +  D               A   ILG +   E    
Sbjct: 345 DALNDDLAVPAALAEVHAARAEGNRALDSGDHDGALRHARAIRAMMGILGCDPLDERWET 404

Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     + + +   ++ R    + + ++ AD IR +L+  G  + D  +    
Sbjct: 405 RDETSAALAAVDVLVHTELENREKAREQRNWALADEIRDRLKHAGIEVTDTADGPQW 461


>gi|300855265|ref|YP_003780249.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300435380|gb|ADK15147.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 471

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 140/469 (29%), Positives = 219/469 (46%), Gaps = 35/469 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+ RK  EF  ++   + +Y CGPTVY++AHIGN R  I  D+L +     YG   V
Sbjct: 5   VYNTMSRKKEEFVPVNEGKVGIYTCGPTVYNYAHIGNLRTYIFEDILKKAFE--YGHYKV 62

Query: 67  TYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V NITD+     D      + +  +   N  +  I       F +D  +L    P   
Sbjct: 63  KHVMNITDVGHLQSDADTGEDKMQIGAERENKTVWEIAKFYENAFFEDCHKLNIRKPDIV 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
            +AT+HI  MI +I+ +   G+ Y +   + ++     +Y   +   ++E + G R+   
Sbjct: 123 CKATDHIQDMIDIIKTLEKKGYTYTSKGNVYYEIDKFKDYNKLANLSMEELEAGARIDVD 182

Query: 183 YHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            +KKNP DF+LW    +       W SPWG+G PGWHIECSAMS  YLG   DIH GG+D
Sbjct: 183 ENKKNPLDFVLWFTNSKFKDQIMQWNSPWGKGFPGWHIECSAMSIKYLGDRIDIHCGGVD 242

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            I  HH NEIA+S       K  N W+H  FL L   KMSKS G+F+T++++        
Sbjct: 243 HIPVHHTNEIAESEAVLG-HKWVNYWMHGEFLVLSDGKMSKSKGDFLTLSKI------EK 295

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------K 344
             +     R   L + YR+ + F+   L +A++   K  +                    
Sbjct: 296 EGFSPMDYRYFCLQSRYRKQLMFSFDALRQAQLAYKKLKEKVADIVSNVKENERADKELV 355

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARES-TKNHDLLPIFNASAHILGIEVCKE---H 400
                     + +DLN  +A   L ++ +++   N +   +  +   +  +++ K    +
Sbjct: 356 NKYKNKFQEKISDDLNIPNAFTVLFEVIKDNELTNKEKSLLIESFDTVFSLDLLKSNNHN 415

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           L K  S  I++L+ ER      K +  AD IR +L+S G  + D K   
Sbjct: 416 LEKLDSEDIKRLICERNDARNHKDWHKADVIRDELKSMGIDIIDSKEGT 464


>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
 gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
          Length = 492

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 182/506 (35%), Positives = 250/506 (49%), Gaps = 81/506 (16%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+   F+      + MYVCG T YD++HIG+AR  + FDVLYR   +   E  VTYVR
Sbjct: 1   MSREKEVFRPRIHGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFTFMGYE--VTYVR 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TDIDDKII+RA        + D    ++++   +F +D   L CLAP+ +PR + +I 
Sbjct: 59  NFTDIDDKIIKRAND------LGDDPIELSNRFCDEFRRDMASLRCLAPSLEPRVSRNID 112

Query: 131 QMIYLIQNIILHGHAYEAN-NEIIFD----TSSIPN-YGSFSRRKIDEQKMGTRVPEKYH 184
           Q+I +I  I+ +G+ Y  +  ++ F       + P+ YG  S RK+D+ + G RV     
Sbjct: 113 QIIKMISQILENGYGYVLDNGDVYFSLDKFVPAFPDCYGRLSGRKLDDNRAGERVAVDDR 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DF+LWK +   EP WESPWG GRPGWHIECSAMS   LG  FDIHGGG+DLIFPH
Sbjct: 173 KLNPGDFVLWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEI QS  A         W+HNGF+ ++  KMSKS GNF TI E+ E        +  
Sbjct: 231 HENEIVQSRAACHESN-ITYWMHNGFVTVDSEKMSKSLGNFFTIREVFEL-------YHP 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------------ 340
             +R  +L THYR PI+++  +L  A   L    QT                        
Sbjct: 283 LALRWFLLCTHYRSPINYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKA 342

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPI- 384
           + +   +  ++ S+L +DLNT   I AL +  +                   + DLL + 
Sbjct: 343 AENAKALRLSLRSSLADDLNTPVTIGALSEPLKLMNELLHSKRGRKDKSRYSSLDLLRLE 402

Query: 385 FNASAHILGIEVCK----------EHLNKNISIAIEKLVQ--ERLILLKMKKFSSADYIR 432
              +  +LG  V            + L +      E L+Q  ER      K F  +D IR
Sbjct: 403 VEQALEVLGFSVADYSQALFLPTCKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIR 462

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
            +L S G  L D      G   T W+
Sbjct: 463 DKLSSLGISLMD-----GGGDETLWR 483


>gi|34556870|ref|NP_906685.1| cysteinyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|61216261|sp|Q7MA68|SYC_WOLSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|34482585|emb|CAE09585.1| CYSTEINYL-TRNA SYNTHETASE (FRAGMENT) [Wolinella succinogenes]
          Length = 467

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 164/487 (33%), Positives = 249/487 (51%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKI+++++R+  EF  +    + +YVCGPTVYD +H+G+AR  I FD+L RL+ +     
Sbjct: 3   IKIFDSVKREKVEFIPLKKGEVSLYVCGPTVYDDSHLGHARSAIAFDLLRRLMEFEGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII+++      +   + I  IT +    +++D  +L    P  +PR
Sbjct: 61  RVRFVKNFTDIDDKIIKKS------LESGEEIGAITERYITSYLEDMQKLGIKRPDIEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  +IQ+++  G AY+    +I  D    P+YG  S R  ++ +  +R+    
Sbjct: 115 ATESLDLMWEMIQSLLQKGIAYQTPRGDIYLDVKQDPSYGKLSGRG-EDLEQVSRIESSE 173

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGGGL 238
            K++P DF LWK      + G+ESP+GRGRPGWHIECSAM   +L K      DIH GG 
Sbjct: 174 EKRDPRDFALWKSYKGQSDVGYESPFGRGRPGWHIECSAMIEKHLAKEGDYAIDIHAGGS 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE  Q+ CA   E  A  W+HNGF+ + G KMSKS GN   + + L      
Sbjct: 234 DLLFPHHENEACQTRCATGRE-LAKYWMHNGFVTINGEKMSKSLGNSFFVKDAL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------P 349
            R +   V+R  +L THYR  ++F+ + L  ++  L +  +     G  +          
Sbjct: 287 -RVYDGEVLRFYLLSTHYRMGLNFSEEDLLASKKRLDRLYRLKKRVGEGEVGAPSEKFLE 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-----------ILG----- 393
            +L  L +D+N   A+ A+ ++   S +  D  P   A              +LG     
Sbjct: 346 RLLEGLRDDMNISRALSAMDEMLTLSNEELDSSPKERALQATIRGNLEVLERLLGIGAKS 405

Query: 394 -IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            I   +  ++      IE+L++ER    K K F+ AD IRK L  +G  L D        
Sbjct: 406 PILYFQMGVSPEEKEKIEELIKERAEAKKAKDFARADEIRKSLSDQGIALLDT------P 459

Query: 453 RMTRWKQ 459
             T W++
Sbjct: 460 SGTLWER 466


>gi|120406286|ref|YP_956115.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|187629833|sp|A1TG09|SYC_MYCVP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119959104|gb|ABM16109.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 463

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 153/474 (32%), Positives = 230/474 (48%), Gaps = 46/474 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL   + +F  + P ++ +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 1   MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ +PR
Sbjct: 60  -VAFIRNVTDIDDKILHKAAD------AGRPWWEWAATYERAFTAAYDALGVLPPSAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI QM+ LI+ +I  GHAY  + ++ F  +++P+YG  S  +ID+   G  V     
Sbjct: 113 ATGHITQMVELIERLIERGHAYTGDGDVYFSVATLPDYGKLSGHRIDDVHQGEGVA--TG 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL+FPH
Sbjct: 171 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCESYLGAAFDIHAGGMDLVFPH 230

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+  A      A  W+HNG++ + G KMSKS GN + I  +L+  +       A
Sbjct: 231 HENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVR-------A 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPAVLSAL 355
             +R  +   HYR  ++F+   L +A    +         +    +   G   P   +AL
Sbjct: 282 AELRYYLGSAHYRSMLEFSETALQDAAKAYAGIEDFLHRVRTRVGAVVPGEWTPKFGAAL 341

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKEHLNK--- 403
            +DL   +A+  +H    E  +  D               A   ILG +   E       
Sbjct: 342 DDDLAVPAALAEVHAARAEGNRALDAGDHDTALTHAMSIRAMMGILGADPLDERWESRDE 401

Query: 404 ------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                  + + ++  VQ R      + ++ AD IR +L+  G  + D  +    
Sbjct: 402 TSAALAAVDVLVQAEVQRREDARARRDWAEADAIRDRLKEAGIEVTDTADGPQW 455


>gi|296122689|ref|YP_003630467.1| cysteinyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
 gi|296015029|gb|ADG68268.1| cysteinyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
          Length = 517

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 163/531 (30%), Positives = 242/531 (45%), Gaps = 89/531 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+TL R+   FQ ++P  ++MY+CGPTVY  AHIG+    ++FD + R L Y   
Sbjct: 1   MPLRVYSTLSRQKETFQTVEPGKVKMYLCGPTVYKPAHIGHMVGPVIFDTVKRYLAYSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V NITD+DDK+I +A ++         +  +  + T  +  +   +   +  H 
Sbjct: 61  D--VTFVVNITDVDDKLINKANEK------GMTVEALAKQMTDDYFDNLKLMGVDSIDHF 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P AT+HI  M+ +I  ++  G+AY  N ++ F  +   +YG  SRR ++E   GTR    
Sbjct: 113 PYATDHIGDMLDMIGKLVEKGYAYPLNGDVYFRCTKDEDYGKLSRRSLEEMLTGTRAESM 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++PADF LWK S P EP W+SPWG+GRPGWHIECSAMS   LG   DIHGGGLDL+F
Sbjct: 173 GGKESPADFALWKGSKPGEPAWDSPWGKGRPGWHIECSAMSKKILGDSIDIHGGGLDLMF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM-------------SKSNGNFITIN 289
           PHHENE+AQS         A  W+HNG +   G+               S+  G      
Sbjct: 233 PHHENELAQSESCTG-HPFARYWMHNGLMQASGQAGKVGGQHDKKGDAESQIAGKLAGSQ 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------ 337
                K           +R  +L THYR PIDF+++R+ E    L  +            
Sbjct: 292 GAESVKTAVFAHHHPETVRFFLLATHYRSPIDFSLERIAETGKSLEGFFRLFELYERLTK 351

Query: 338 -------------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
                                       +T    +    L A+ +D NT  A+  L ++ 
Sbjct: 352 KNFYSLIPAAKRSDSKPITAETPDQQAFATELNGLKDRYLDAMDDDFNTGGAVGLLFEMR 411

Query: 373 REST-------------KNHDLLPIFNASAHI--LGIEV---------CKEHLNKNISIA 408
           R                   DL  + +A   +  LG+ +              +  +   
Sbjct: 412 RVINGFISEKKLETGAGSAADLQLLTDAMTLVRELGLLLGVFREPRAKESSADDGLLDGL 471

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           ++ ++Q R    K K F+ AD IR +L     ILED  +       T WK+
Sbjct: 472 MQLIIQIRADARKSKNFAVADLIRNKLTELKLILEDRPD------GTLWKK 516


>gi|225011916|ref|ZP_03702354.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
 gi|225004419|gb|EEG42391.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
          Length = 492

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 153/491 (31%), Positives = 224/491 (45%), Gaps = 44/491 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +YN+L  K   F++I P+++ MYVCGPTVY   H+GN R  I FD+++R L++ 
Sbjct: 1   MDSTLVLYNSLNGKKETFKSILPNHVGMYVCGPTVYSNVHLGNCRTFISFDLIFRYLQHL 60

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD     +D      R    +   +     +  + T  F     +   
Sbjct: 61  GYK--VRYVRNITDAGHLENDADEGEDRIAKKARLESIEPMEVVQRYTVDFRDTMAQFNA 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P AT HI + I LI+ II  G+AYE N  + FD         YG  S R I++ 
Sbjct: 119 LVPSIEPTATGHIVEQIELIKEIIEQGYAYEVNGSVYFDVIKFNKDIPYGKLSGRNIEDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  KKNP DF LWK++ P+    W SPW  G PGWH+EC+AMS+ YLG  F
Sbjct: 179 IHNTRTLDGQSDKKNPQDFALWKKAEPVHIMRWPSPWSEGFPGWHLECTAMSTKYLGSQF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHE EIAQ+    +     N W+H   L L G+KM+KS GN I   E+
Sbjct: 239 DIHGGGMDLKFPHHECEIAQAESIHKKSP-VNYWLHANMLTLNGKKMAKSTGNNILPGEM 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----------LSKWPQT 340
                    +++    +R  +L  HYR  +D +   L  +E            L + P  
Sbjct: 298 FSGENSIFKKAFSPMTVRFFILQAHYRSIVDLSESALEASEKGFQRLIDGISKLERLPIG 357

Query: 341 STSKGI----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--------- 387
             +             +A+ +D N+   I  L    +      + L   N          
Sbjct: 358 DKTSDFDLVKWKNKCYAAMNDDFNSPLLIAHLFDAVKYINAVDNGLQQINKDDLKDLSKL 417

Query: 388 ----SAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                  +LG+    +  KE+    +  A+  +++ R      K F ++D IR  L    
Sbjct: 418 INDFFFDVLGLLNEDDNNKENGGVQLDGALNLILELRNKARASKDFETSDLIRDSLSELN 477

Query: 440 FILEDYKNPDN 450
             + D      
Sbjct: 478 IQINDTSEGTT 488


>gi|33592950|ref|NP_880594.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|61216293|sp|Q7VX96|SYC_BORPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33572598|emb|CAE42190.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382362|gb|AEE67209.1| cysteinyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 486

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 153/418 (36%), Positives = 215/418 (51%), Gaps = 33/418 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+      +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 2   LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGL-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY A + ++ +      +YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK----- 295
            FPHHENEIAQ+  A      AN+W+H G L ++  KMSKS GNF TI + +        
Sbjct: 234 KFPHHENEIAQTEGAFGGA-LANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSDT 292

Query: 296 --KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------ 347
             ++      A ++R  ++  HYR P ++    L +A+  L +  Q   +          
Sbjct: 293 QAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVDW 352

Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCK 398
                  A  +A+ +D N+  A+ AL +LA E+ +      +    A   +LG+    
Sbjct: 353 SEEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAVGQLKALGAVLGLLQQD 410


>gi|305663603|ref|YP_003859891.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378172|gb|ADM28011.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 476

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/490 (34%), Positives = 251/490 (51%), Gaps = 63/490 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I IYNTL R+I  F+ I+P  ++ Y CGPTVYD+ H+G+ R  + FD + R L+    + 
Sbjct: 3   ITIYNTLSRRIEPFEPINPPLVKAYFCGPTVYDYTHLGHIRAYLAFDFIKRYLKLRGYD- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +++NITDIDDKII+RA +E        +   +T K  + +++    L        PR
Sbjct: 62  -IIHIQNITDIDDKIIKRANEE------GVSWKELTDKYIRDYLQILNALKIEI-HLHPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
            T HI ++I  I+ +I  G+AY A +  + FD S + +YG  S RK  E+    R  E+ 
Sbjct: 114 VTEHINEIIEFIKGLIDKGYAYVAPSGSVYFDISLVNDYGKLSGRKKAEE---WRQEEEF 170

Query: 183 -YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK S P EP WESPWGRGRPGWH EC+ MSS YLG  FD+HGGG DLI
Sbjct: 171 LSEKRNPYDFALWKASKPGEPFWESPWGRGRPGWHTECAVMSSKYLGTQFDVHGGGQDLI 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIA +     ++     WIH G+L + G KMSKS GN I   + +         
Sbjct: 231 FPHHENEIAMAEALYGVKPWVKYWIHVGYLTIRGEKMSKSLGNVIYAKDAIN-------K 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------- 338
           +   ++RL    +HYR+ ++ + + L     + S+                         
Sbjct: 284 YSPEILRLWAFSSHYRKQVEVSDEVLNSYRDVYSRLVLAVETLKKIIKQENIKYSLKEDE 343

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA----RE---------STKNHDLLPI 384
                   +I+     A+ +D NT  A +A+H+L     +E         + + +++L  
Sbjct: 344 INILKKLEMIEIEFHKAMSDDFNTPKAFEAVHELTSLVFKEIERYETFELALRAYEILLN 403

Query: 385 FNASAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           FN    +L  +  +E +    + I   IE +++ R  L K K++  +D IR++L   G  
Sbjct: 404 FNKVIGVLD-KYFEESITVDIEMIEKLIELILKVRTELRKRKEYELSDKIRQELLMLGIK 462

Query: 442 LEDYKNPDNG 451
           + DYK+    
Sbjct: 463 VFDYKDGSKW 472


>gi|307298183|ref|ZP_07577987.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916269|gb|EFN46652.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 462

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 164/471 (34%), Positives = 245/471 (52%), Gaps = 30/471 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I++ NT+ R+   F+ +    + +Y CG TVY+FAHIGN R  +  D L R+  + + 
Sbjct: 1   MEIRLTNTMSRRKEIFKPLKIGEVGIYTCGLTVYNFAHIGNLRAYVFADTLKRM--FLFN 58

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V +V NITD+     D+     + E  +      +  I    T+ F KD  RL  + 
Sbjct: 59  GYKVRHVMNITDVGHLTGDEDEGEDKMEAGARREGKTVWEIVDFYTKAFFKDLERLRIIL 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PT   RAT H+  MI +IQ I  +G+ Y A   + FDTS +P+YG  +R ++DE+K+ +R
Sbjct: 119 PTVTCRATEHVQDMIDMIQKIEANGYTYIAGGNVYFDTSKVPDYGKLARLQLDEEKIRSR 178

Query: 179 VPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     KKNP DF+LW      E     W+SPWGRG PGWHIECSAM+S YLG+ FDIH 
Sbjct: 179 VENDPFKKNPFDFVLWFTRYKYENHAMQWDSPWGRGFPGWHIECSAMASKYLGERFDIHT 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLET 294
           GG+D I  HH NEIAQS  A   E   N W+H+ FL + EG KMSKS GNFIT+  L++ 
Sbjct: 239 GGIDHIPVHHTNEIAQSEAAFGHE-WVNFWLHSEFLVIGEGEKMSKSLGNFITLQTLID- 296

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTS 343
                R +     R  +L  HY++ + FT++ L  A+  + K               +  
Sbjct: 297 -----RGYEPADYRYYLLGAHYKKQLTFTMEALDGAKSAMKKLITRIEELKELNESETRP 351

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +      A+ +DLNT  A+  L K+   E  +  + L + +    +LG+    E  +
Sbjct: 352 NDDLMNEFHEAINDDLNTPKALAVLWKVVDSEDLRPGEKLSLIDRFDEVLGL-GLSEVES 410

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           K I   + +L  +R    K + +  AD +R+ +  KG+ + D ++    +R
Sbjct: 411 KTIPEEVIELANQRDAARKERNWEKADELRQLISEKGYEVLDERDGYKIRR 461


>gi|254430939|ref|ZP_05044642.1| cysteinyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197625392|gb|EDY37951.1| cysteinyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 505

 Score =  478 bits (1230), Expect = e-132,   Method: Composition-based stats.
 Identities = 172/525 (32%), Positives = 238/525 (45%), Gaps = 87/525 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL R+   F+ + P  + +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MTLRLTNTLTRRTEAFEPLQPGTVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V+N TDIDDKI+ RA +E        ++  ++++N Q F  D  RL  L P   
Sbjct: 61  --AVTFVQNYTDIDDKILRRAAEE------GSSMEAVSARNIQAFEADMARLNILPPDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  +  +  LIQ +   G AY A+ ++ F       YG  S R++ EQ+        
Sbjct: 113 PRATRSLEAIRALIQELEARGAAYSADGDVYFAVMRHAGYGKLSGRELSEQQNNAAGRVA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK + P EP + SPWG GRPGWHIECSAM    LG   DIH GG 
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGPGRPGWHIECSAMVREELGDTIDIHLGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHENEIAQS  A   E  A  W+HNG +N+ G KMSKS GNF TI  LL++    
Sbjct: 233 DLIFPHHENEIAQSEAATGRE-LARYWLHNGMVNVGGEKMSKSLGNFTTIRGLLDS---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEA---------EILLSKWPQ 339
                   +RL  L  HYR+P+DFT             L  A              K  +
Sbjct: 288 --GISPMTLRLFTLQAHYRKPLDFTAEALDAAAAGWSGLNAALGLNGGEDGSAGQEKATE 345

Query: 340 ---------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP- 383
                                 +    ++A+ +DLNT +A+  L +LAR        L  
Sbjct: 346 PEAITAVPIATDPASLREELAALQRRFIAAMDDDLNTAAALAVLFELARPLRGLAHRLER 405

Query: 384 -------------------IFNASAHILGIE---------VCKEHLNKNISIAIEKLVQE 415
                              +    A +LG+                       I   ++ 
Sbjct: 406 GDPAAAVEAGQPEIASRSRLLQELAAVLGLRHEPSAPPQTAKGTGEGGATEERIAARIEA 465

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           R      + F+ AD IR +L ++G  L D         +T W ++
Sbjct: 466 RRAAKAARDFTEADRIRAELLAEGIELIDRPGG-----VTDWLRR 505


>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
          Length = 561

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 185/543 (34%), Positives = 265/543 (48%), Gaps = 108/543 (19%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ ++N+  ++   FQ      + MYVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 31  PPQLLLFNSFTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLG 90

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D T L CL PT 
Sbjct: 91  YE--VEYVRNFTDIDDKIIKRANER------GETVTSLSSQFINEFLLDMTELQCLPPTC 142

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR T HI  +I LI  I+ +G AY    ++ F   S P Y S S RK D+ + G RV  
Sbjct: 143 EPRVTEHIEHIIKLITQIMENGKAYAIEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAF 202

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLI
Sbjct: 203 DTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLI 262

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS  A    +    W+HNGF+N + +KM+KS+ NF TI +++         
Sbjct: 263 FPHHENELAQSRAAYPDSE-VKCWMHNGFVNKDDKKMAKSDNNFFTIRDIIAL------- 314

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLT--------------EAEILLSKWPQTSTSK--- 344
           +    +R  ++ THYR  ++ + Q L               + E +L+ + +  TS    
Sbjct: 315 YHPMALRFFLMRTHYRSDVNHSDQALEIASDRVYYIYQTLYDCEEVLATYREEGTSLPVP 374

Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALH-KLARESTKNHDLL-------------- 382
                  G      L  + NDL T   +     +L +    + + L              
Sbjct: 375 SEEQNLIGKHHSEFLKHMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQ 434

Query: 383 ----------------------------------PIFNASAHILGI-------EVCKEHL 401
                                                     ILG+       EV K+  
Sbjct: 435 QQQKKQQQQKQQQQKQQQLQKQPEDYIQALIALETELKNKLSILGLMPSSSLAEVLKQLK 494

Query: 402 NKNISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           +K++  A      +++ +++R +  K K+F  +D IRK L +KG  L D          T
Sbjct: 495 DKSLKRAGLTEEQLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMDE------PSGT 548

Query: 456 RWK 458
            W+
Sbjct: 549 VWR 551


>gi|152992414|ref|YP_001358135.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166225309|sp|A6Q8G9|SYC_SULNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151424275|dbj|BAF71778.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 465

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 237/487 (48%), Gaps = 55/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++++++    F+ I      +YVCGPTVYD AH+G+AR  + FD+L R L+    + 
Sbjct: 1   MQIFDSVQKTKVTFEPIREGEASIYVCGPTVYDDAHLGHARSSLAFDLLSRTLKALGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V   +N TDIDDKII++            ++  ITS   Q+++ +  +L       +P+
Sbjct: 60  -VIMAKNFTDIDDKIIKK------VEETGKSMQEITSYYIQRYLDEMEQLGVQRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  +  +IQ +I    AY  +N ++ FDTS   +YG  S  K+ +    +RV    
Sbjct: 113 ATESLDAIEQMIQTLIDKDFAYVVSNGDVYFDTSKDSHYGDISH-KVSDDDTQSRVEHNS 171

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGL 238
            K+NP DF LWK      +  + +P+  GRPGWHIECSAM   Y         DIHGGG 
Sbjct: 172 EKRNPRDFALWKACKGEEDICFGAPFSSGRPGWHIECSAMIEKYFKGNGQYSIDIHGGGA 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQS CA   E  A  W+HNGF+ + G KMSKS GN   + + LE     
Sbjct: 232 DLLFPHHENEAAQSRCATGHE-LAKYWMHNGFVQINGEKMSKSLGNSFFLKDALEV---- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDP 349
              +   V+R  +   HYR   +F  + L  A+  L K  +          ST       
Sbjct: 287 ---YGGEVLRYYLNSVHYRNDFNFNEEDLQTAKKRLDKLYRLKKRVLPGKASTVNKAFKQ 343

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
           A+L+A+ +DLN   A+  + ++  E+ +  D            +        +LG    +
Sbjct: 344 ALLNAMSDDLNISIALAVIDEMIAETNEKLDTDPKNKALKKETIANIEFIDTLLGFGGKE 403

Query: 399 EH------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                   +++ +   IE L+QER    K K F+++D IR +L   G  + D        
Sbjct: 404 PFSYFQIGVDEALKEKIEILLQERTEAKKAKDFATSDAIRNELIDMGISIMDT------A 457

Query: 453 RMTRWKQ 459
             T W++
Sbjct: 458 EGTVWEK 464


>gi|118576528|ref|YP_876271.1| cysteinyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195049|gb|ABK77967.1| cysteinyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 455

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 181/469 (38%), Positives = 249/469 (53%), Gaps = 45/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++TL+ K  E   +      +Y+CG TVYD AHIG+AR +IVFDVL R L     E 
Sbjct: 1   MRIHDTLDGKKKE---VRADKAGIYLCGVTVYDEAHIGHARTIIVFDVLRRHLESRGTE- 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+N TD+DDKIIERAR E        +   ++++  + +  +  RL     +  P 
Sbjct: 57  -VRLVQNFTDVDDKIIERARSE------GTSAQELSARYIRAYHAEFGRLGVRRASEYPL 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H+P+++ LI++++  G AY A N + F  S  P YGS S R       G RV     
Sbjct: 110 ATEHMPEILELIKSLVGSGSAYAAPNGVYFSVSGFPRYGSLS-RNTGGLISGARVGIDAG 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK S   +P WESPWGRGRPGWHIECSAM   YLG+ F+IHGGG DLIFPH
Sbjct: 169 KRDPTDFALWKLSR-GDPSWESPWGRGRPGWHIECSAMCLKYLGETFEIHGGGRDLIFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS       + A IW+H G + ++G KMSKS GN  ++  LLE        W  
Sbjct: 228 HENEMAQSEAHTG-RRLAKIWMHVGMVTIDGEKMSKSLGNMKSVRFLLER-------WSP 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------WPQTSTSKGIIDPAV 351
             +R+  +  HY +P+D++ + L E E    +              P    + G +    
Sbjct: 280 GAMRIFCIAGHYSKPVDYSEELLEEHETFWERARLAYHVLVQGKPAPGGDDTAGRLWAEF 339

Query: 352 LSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +AL +DLNT  A+ A   L        K+ +LL IF+A   +LG+E+    L       
Sbjct: 340 GNALDDDLNTHLALDAFRSLVSYCLGGPKDSELLRIFDAMLGVLGLEIP--VLTGGERTR 397

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +E L+ ER  L     +  AD+IR  L SKG  L+D      G   T W
Sbjct: 398 VEGLISERARLRGNGLYDEADHIRDNLASKGITLQD------GPEGTIW 440


>gi|32473247|ref|NP_866241.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|32397926|emb|CAD73927.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 628

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 165/536 (30%), Positives = 240/536 (44%), Gaps = 93/536 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  I++YNTL +    F  +    + MY+CGPTVY  +HIG+    ++FD + R L Y  
Sbjct: 108 QPAIRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSG 167

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VT+V NITD+DDK+I ++++          +S I  + T  ++ +   L      H
Sbjct: 168 YE--VTWVVNITDVDDKLIGKSKER------GIPMSQIAVEMTADYLANLRELGVNQIDH 219

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT+H+PQ+I  I ++   G AY  + ++ FD +  P YG  S R +++Q+ G     
Sbjct: 220 LPRATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVEDQQ-GEGGGA 278

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+
Sbjct: 279 AAKKRNPGDFALWKSARPGEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLM 338

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQS C          W+HNG +     G+   KS+            ++  G
Sbjct: 339 FPHHENERAQSTCCHGA-PMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASG 397

Query: 300 ---------------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
                          RS     IR  +L T YR  I +  + L EA   L  + +     
Sbjct: 398 KISRSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRF 457

Query: 340 --------------TSTSKGIIDPA--------------VLSALYNDLNTVSAIQALHKL 371
                         T  + G  DPA               L+A+ +D NT +AI  L   
Sbjct: 458 AEITGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDA 517

Query: 372 ARESTKNHD--------------------LLPIFNASAHILGIEVC-------KEHLNKN 404
            R   ++ D                       +    + +LG+           E   + 
Sbjct: 518 LRTLNRHIDANQLAAGADAKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEADAEL 577

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +   +  L+  R    + K +++ D IR +L   G  L D K        T W++K
Sbjct: 578 LDSVVHLLINLRKEARERKDYATGDAIRDRLADLGVALLDKK------EGTSWERK 627


>gi|297748910|gb|ADI51456.1| Cysteinyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749790|gb|ADI52468.1| Cysteinyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 500

 Score =  477 bits (1229), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/490 (32%), Positives = 242/490 (49%), Gaps = 63/490 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +   
Sbjct: 24  MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 82

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 83  --SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAY 134

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  
Sbjct: 135 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 194

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 195 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 254

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+    
Sbjct: 255 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQ 339
             + +    +R  +L  HYR  ++FT + L  +   L +                   P+
Sbjct: 310 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 367

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            +T+        +++L NDLN  S++ AL    R+   + D                   
Sbjct: 368 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 427

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+
Sbjct: 428 QHILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 484

Query: 439 GFILEDYKNP 448
            F +ED K  
Sbjct: 485 SFAIEDGKTG 494


>gi|15605515|ref|NP_220301.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|255311617|ref|ZP_05354187.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317918|ref|ZP_05359164.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|3329246|gb|AAC68377.1| Cysteinyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|296437262|gb|ADH19432.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/11222]
          Length = 497

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/490 (32%), Positives = 242/490 (49%), Gaps = 63/490 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +   
Sbjct: 21  MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 79

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 80  --SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAY 131

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  
Sbjct: 132 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 191

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 192 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 251

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+    
Sbjct: 252 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 306

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQ 339
             + +    +R  +L  HYR  ++FT + L  +   L +                   P+
Sbjct: 307 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 364

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            +T+        +++L NDLN  S++ AL    R+   + D                   
Sbjct: 365 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 424

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+
Sbjct: 425 QHILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 481

Query: 439 GFILEDYKNP 448
            F +ED K  
Sbjct: 482 SFAIEDGKTG 491


>gi|319442435|ref|ZP_07991591.1| cysteinyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 474

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 145/493 (29%), Positives = 236/493 (47%), Gaps = 60/493 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R++ +F  +   +  +Y+CG TV    HIG+ R  + FD+L   L     
Sbjct: 1   MTLRIFDTATRELRDFVPLQEGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLAAKGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ ++ +       N       + + + F +    L    P+ +
Sbjct: 61  D--VAFVRNVTDIDDKILAKSAEN------NRPWWEWAATHERAFTRAYDLLGVTPPSIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+P+MI  I+ II +G  Y   +  +   T+ +P+YG  S +K+DE   G     
Sbjct: 113 PRATGHVPEMIAYIRRIIDNGLGYATEDGSVYCRTAQVPDYGFLSHQKLDELDQGE--DA 170

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF +WK + P EPGWE+PWG GRPGWHIECSAMS+ YLG  FDIH GG+DL 
Sbjct: 171 VPGKEDPRDFAMWKAAKPGEPGWETPWGFGRPGWHIECSAMSNKYLGGAFDIHAGGMDLQ 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE   +      +  AN W+HNG++ + G KMSKS GN +++  +L   +     
Sbjct: 231 FPHHENEA--AQAHAAGDAFANHWMHNGWVTMSGEKMSKSLGNVLSVPNVLTKVR----- 283

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSK----GIIDPA 350
                +R  +   HYR  ++++ + L +A       E  L +  +   ++    G   PA
Sbjct: 284 --PIELRWYLGSAHYRSMLEYSEKALQDAAAGFRKIEKFLDRAVELLGAEAVVAGAWRPA 341

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL 401
              AL +DL   +A+  +    RE     D         +     A   +LG++   +  
Sbjct: 342 FEEALDDDLGVPTALAVIQDAVREGNAALDAGDTAAVQRIAGEVRAMMGVLGVDPLSDTW 401

Query: 402 NKN--------------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                                  + + ++  ++ R      K +++AD +R +L+  G  
Sbjct: 402 AGEDSKGRGQGIGAGASDEAIGALDVLVKAELERRATARAEKDWATADAVRDRLKDAGIA 461

Query: 442 LEDYKNPDNGQRM 454
           + D  +       
Sbjct: 462 VADSADGATWSLG 474


>gi|58584937|ref|YP_198510.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|81311609|sp|Q5GRV6|SYC_WOLTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|58419253|gb|AAW71268.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 433

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 187/452 (41%), Positives = 264/452 (58%), Gaps = 41/452 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+   TYVRNITDIDDKII  A ++ 
Sbjct: 1   MYVCGPTVYDTAHIGNARSIVVYDVLFQLLKFCYGK--ATYVRNITDIDDKIINAANEK- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                + +I  I++  T+ F +D   + C+ PTH+P+A  +I  +I LI+ ++  GHAYE
Sbjct: 58  -----DSSIESISTYYTRAFHEDMRSINCVEPTHEPKAAENIKYIIELIEYLLQSGHAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---- 203
           +N  I F   S P YG+ S +KIDE + G+RV    +KK+P DF+LWK +   +      
Sbjct: 113 SNKHIYFSIESYPEYGALSGKKIDELEHGSRVEVGENKKHPGDFVLWKPANDTDYKLSSY 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL FPHHENEIAQ+  A      A 
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQNKSAFAGSMFAK 232

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNG L +   KMSKS  N + + +LL++   G       VIR A+  THYR+P+D+T
Sbjct: 233 YWVHNGSLTVNKEKMSKSLFNIVKVRDLLDSGIKG------EVIRYALFKTHYRKPLDWT 286

Query: 324 VQRLTEAEILLSKWPQT---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
              ++E++  L+K+ +            S   +    +  L NDLN   A+  LH++A +
Sbjct: 287 ESVISESQETLNKFYRLLRGIDVASIEKSDVEVSRDFIETLKNDLNIPEALAILHEMATK 346

Query: 375 STKNHD------LLPIFNASAHILGIEVC--KEHLNKNIS-IAIEKLVQERLILLKMKKF 425
             K ++      L   F  SA  +G+     +E     IS   I++L+  R +  + K +
Sbjct: 347 INKTNNENEKLKLTESFIKSARFIGLLESSYQEWFTAGISYQEIKRLIDLRKVAKQNKDY 406

Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            +AD IR QL+  G  + D ++       T W
Sbjct: 407 DAADKIRDQLKQMGVTISDNEDGT-----TTW 433


>gi|167467942|ref|ZP_02332646.1| cysteinyl-tRNA synthetase [Yersinia pestis FV-1]
          Length = 336

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 149/343 (43%), Positives = 203/343 (59%), Gaps = 17/343 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY     
Sbjct: 2   LKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRN+TD+DDKII+RA      I  N+    +T++   +  KD   L    P  +PR
Sbjct: 60  SLTYVRNVTDVDDKIIKRA------IENNETCEQLTTRMLAEMHKDFDALNLERPDLEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I + + +I  GHAY A N +++F   S P+YG  SR+ +D+ + G RV    
Sbjct: 114 ATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVAD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA       N W+H+G + ++  KMSKS  NF TI ++L         + 
Sbjct: 234 HHENEIAQSTCAHDG-PYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           A  +R  ++  HYR  ++++ + L +A                
Sbjct: 286 AETVRYFLMSGHYRSQLNYSEENLKQARAFTGALYTALRGTDA 328


>gi|33600720|ref|NP_888280.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|61216294|sp|Q7W862|SYC_BORPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|61216296|sp|Q7WLL0|SYC_BORBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|33568320|emb|CAE32232.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 485

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 153/417 (36%), Positives = 214/417 (51%), Gaps = 32/417 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R    F+      +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR      
Sbjct: 2   LHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGL-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YVRNITDIDDKII RA      +     I  +T         D   L    P  +PR
Sbjct: 60  AVDYVRNITDIDDKIIRRA------VETGRRIGEVTEYYIAAMHADERALGVQPPDREPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++ +M+ +I  +   G AY A + ++ +      +YG  S + +D+ + G RV    
Sbjct: 114 ATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVGS 173

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K++P DF+LWK + P EP    WESP+G GRPGWHIECSAMS   LG   DIHGGG DL
Sbjct: 174 AKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK----- 295
            FPHHENEIAQ+  A      AN+W+H G L ++  KMSKS GNF TI + +        
Sbjct: 234 KFPHHENEIAQTEGAFGGA-LANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSDT 292

Query: 296 --KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------ 347
             ++      A ++R  ++  HYR P ++    L +A+  L +  Q   +          
Sbjct: 293 QAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVDW 352

Query: 348 ----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCK 398
                 A  +A+ +D N+  A+ AL +LA E+ +           A   +LG+    
Sbjct: 353 SEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQD 409


>gi|21672736|ref|NP_660803.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|22654284|sp|P46241|SYC_BUCAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|21623381|gb|AAM68014.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 463

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 180/483 (37%), Positives = 258/483 (53%), Gaps = 49/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT   K   F+ I    I +YVCG TVYDF HIG+AR  +VFD++ R LR    + 
Sbjct: 2   LKIFNTATSKKEIFKPIKNKKINLYVCGVTVYDFCHIGHARTFVVFDMIVRYLRLIGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII ++ +E         IS  T+   ++  KD + L    P  +PR
Sbjct: 61  -VKYIRNITDIDDKIILKSLKEK------IDISAFTNIMIKEMNKDFSLLGISPPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            TN+I  +I +I+ +I + +AY  +  ++IF  +S   YG+ SR+ +D+   GTR+    
Sbjct: 114 VTNYIIDIIKVIEKLIKNKNAYVNDHGDVIFSINSDKFYGTLSRQSLDKLISGTRISIDK 173

Query: 184 HKKNPADFILWKRSTPMEPG-WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKN +DFILWK+S   E   W SPWG+GRPGWHIEC+A+++ +     DIHGGG DL+F
Sbjct: 174 EKKNSSDFILWKKSKKEEKFSWNSPWGKGRPGWHIECTAITNVFFKDYIDIHGGGSDLLF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEI+QS C ++  +    W+H+G + ++ +KMSKS GN   + ++LE        +
Sbjct: 234 PHHENEISQSRCLNKNFR-VKFWMHSGLVIIKNQKMSKSLGNSFFLKDVLE-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-TSKGIIDP--------AVLS 353
            A V+R   L THYR PI +T + L ++E+ L     T   +K I DP            
Sbjct: 286 EAEVLRFFFLSTHYRHPIYYTEENLKKSEMSLEYLYVTLYGTKPIFDPIEGVNFEIDFFE 345

Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEV--------C 397
           AL +D NT  A   L KLAR+          K++         A  LG  +         
Sbjct: 346 ALNDDFNTPQAFSILFKLARKINYLKKIDLSKSNFFAFRLQKLAGYLGFLLNTSQYFLQK 405

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K   ++ I   IE L+++R    K K +  AD +R +L     ILED          T W
Sbjct: 406 KLPFDEEIIKKIESLIEKRNFARKSKLWKEADKLRDKLIKLNVILEDL------PEKTLW 459

Query: 458 KQK 460
           + K
Sbjct: 460 RFK 462


>gi|330836349|ref|YP_004410990.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748252|gb|AEC01608.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 478

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/476 (33%), Positives = 228/476 (47%), Gaps = 40/476 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+ R I EFQ I+   + MY CGPTVY++AHIGN R  +  DVL R+L Y      V
Sbjct: 5   VYNTMSRTIEEFQPIEEGKVGMYCCGPTVYNYAHIGNLRTYVFEDVLRRVLSYAGYN--V 62

Query: 67  TYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V NITD+     +    E   +        ++  I S  T  F +D   L  + P   
Sbjct: 63  KHVMNITDVGHLTDDGDAGEDKMLKSAREKGMSVWDIASFYTDAFFRDFDALGNMRPQII 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI--DEQKMGTRVP 180
            +AT+H+ QMI LIQ +   GH Y A   + F   + P+YG  +   +  DE K G R+ 
Sbjct: 123 CKATDHVQQMITLIQKLEEGGHTYAAGGNVYFSIDTFPDYGKLAGLHLHMDELKAGARIE 182

Query: 181 EKYHKKNPADFILWKR-STPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K+NP DF+LW   S   E    W+SPWGRG PGWHIECSAMS  YLG  FD+H GG
Sbjct: 183 VDTFKRNPKDFVLWFTNSKFGEQAMMWDSPWGRGYPGWHIECSAMSMTYLGDKFDLHCGG 242

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D I  HH NEIAQS  A         W+H  FL  +  KMSKS+G+F+T+  L++    
Sbjct: 243 IDAIPVHHTNEIAQSEAATGDHPWVKYWMHGEFLLNDTGKMSKSSGSFLTLQVLID---- 298

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIIDPA--- 350
             + +     R   L  HYR  + F+ + L  A      L+ +  +     GI  P    
Sbjct: 299 --KGYEPLDYRFFCLGAHYRTQLRFSWEALDGARSSRRNLVGRIGRLKAEAGIPSPQPGE 356

Query: 351 --------VLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHILGIEVCKEHL 401
                       ++NDLN   A+  +  L + +S    D L +      I G+   K   
Sbjct: 357 TASGYLANFTEQIFNDLNMPRALAVMWGLLKDDSVSAADKLAVLLEMDKIFGLSFDKVQP 416

Query: 402 NKN-------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            ++             +LV+ R    K + F++AD +R +LE  G+I+ D  +   
Sbjct: 417 QEDSTPVEGADDPEALELVRLRAEAKKSRDFATADRLRAKLEGIGYIVTDTPSGTT 472


>gi|116669295|ref|YP_830228.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|166200129|sp|A0JSV8|SYC_ARTS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116609404|gb|ABK02128.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 487

 Score =  477 bits (1228), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/494 (33%), Positives = 235/494 (47%), Gaps = 59/494 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+T   ++ +F  + P  + +Y CG TV    H+G+ R  I FD L R L Y     
Sbjct: 1   MRFYDTASAEVRDFVPLIPGKVSLYYCGATVQGLPHVGHIRSAIAFDQLTRWLEYRGF-- 58

Query: 65  CVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            VT VRN+TDIDDKI+ ++        +E P     +    +  +  Q F+K    L   
Sbjct: 59  RVTVVRNVTDIDDKILAKSALSFEPDFEEGPDDVREEEWWALAYRYEQAFLKAYDTLGVS 118

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQK 174
            PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YGS +R+KID+ +
Sbjct: 119 RPTYEPRATGHIPEMHALIQGLIDRGHAYPALDDSGDVYFDVRSWNRYGSLTRQKIDDMQ 178

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            G    +   KK+P DF LWK     EP    W SPWG GRPGWH+ECSAM + YLG  F
Sbjct: 179 -GAPDADPRGKKDPRDFALWKGHKEGEPTTASWVSPWGTGRPGWHLECSAMVTKYLGTEF 237

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  +G KMSKS GN ++  E+
Sbjct: 238 DIHGGGLDLRFPHHENEMAQSQAA--GHAFANFWMHNGMVTYQGEKMSKSIGNTVSPAEM 295

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGI 346
           LE            V+R  +    YR  +D+    L EA   + +          T  G 
Sbjct: 296 LELA-------SPRVVRYYLGQAQYRSVLDYQPTSLQEAAAAVERIDGFIARAVRTLSGS 348

Query: 347 IDPAVLSALYN---------------DLNTVSAIQALHKLAREST---------KNHDLL 382
           +       L++               DLN   A+ ALH   R                 L
Sbjct: 349 VVSGAAELLFSSHGTVPDAFAAAMDDDLNVPQALAALHDTVRAGNTALTAGDNSAARTAL 408

Query: 383 PIFNASAHILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
                   +LG+         E  +  + + +E  +  R      K ++++D IR  L +
Sbjct: 409 HSVTDMLRVLGLNDVAAPARDEQADTALGVLVEAQLGARAQARATKDWAASDAIRDTLAA 468

Query: 438 KGFILEDYKNPDNG 451
            G ++ED  +  + 
Sbjct: 469 AGVVVEDGPDGASW 482


>gi|313900429|ref|ZP_07833922.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954491|gb|EFR36166.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
          Length = 445

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 158/466 (33%), Positives = 238/466 (51%), Gaps = 50/466 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N++ +K+ EF+ +  + + MYVCGPTVY++ HIGNARP++VFD L R  +      
Sbjct: 1   MKIFNSMNQKVEEFKPLHENEVHMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAIGYN- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TD+DDKII+ A++         + + IT K    +  D   L    P   PR
Sbjct: 60  -VKMVSNYTDVDDKIIKVAKEC------GVSEAEITEKFIDAYNHDRLSLHAAMPDAAPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ ++  GHAYE   ++ F  +S+ +YG  S ++I++  +G R+ E   
Sbjct: 113 VTETMDAIIAFIKLLVDKGHAYEMEGDVYFRVNSVESYGKLSNQQIEDLLVGARIDENSK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG--KVFDIHGGGLDLIF 242
           K+NP DF LWK++      W+SPW  GRPGWH EC  M +   G     DIHGGG+DL F
Sbjct: 173 KENPLDFTLWKKTEEG-IKWDSPWSVGRPGWHTECVVMINQEFGGEHTIDIHGGGMDLKF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A      AN WIHNG +N++G KMSKS GN I   +++          
Sbjct: 232 PHHENEIAQSRAAY-DSPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIAKIG------ 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIID---------- 348
              V+R  ML  HYR P++   + +  A+  L++      Q     G+ D          
Sbjct: 285 -GNVLRWVMLSAHYRAPLNINEEAIETAKKELNRVATAMKQAYVKLGLADVDMDETCDEE 343

Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIE 395
                L A+ +D+NT +A  A+ +  +   +              L+        +LGIE
Sbjct: 344 QLAPFLDAMQDDMNTPNAFAAVFETVKALNQALRQREIDLQAVKALVRTLEKMMDVLGIE 403

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           + +      +S   ++L ++    +K K F +AD  R +L  KG +
Sbjct: 404 LLRL----TMSEEDKQLHRQWKAAVKEKDFETADQYRAKLIEKGIL 445


>gi|11467971|sp|O84787|SYC_CHLTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 477

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/490 (32%), Positives = 242/490 (49%), Gaps = 63/490 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F  ++   +++Y CGPTVYD+AHIGN R  I  D+L R+L +   
Sbjct: 1   MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DDK +  AR++        ++          F  D   L  L     
Sbjct: 60  --SVYHVMNITDVDDKTLAGARKK------GCSLEKYCQPYIHAFFADLETLHILKADAY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P AT++IPQMI  IQ +I  G AY   +  + F  S  PNYG+ S   ++E +   R+  
Sbjct: 112 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 171

Query: 181 EKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           ++Y K N  DF+LWK   P    E  WESP+G+GRPGWH+ECS MS   LG+  DIH GG
Sbjct: 172 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D IFPHHENEIAQS      +     W+H+  L ++ +KMSKS GNF T+ +LL+    
Sbjct: 232 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------PQ 339
             + +    +R  +L  HYR  ++FT + L  +   L +                   P+
Sbjct: 287 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
            +T+        +++L NDLN  S++ AL    R+   + D                   
Sbjct: 345 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 404

Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             +L +      +LG+    +    +I   +  LV++R    K+K +  AD +R ++ S+
Sbjct: 405 QHILALLRKIDQVLGVLPFSQ---PDIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 461

Query: 439 GFILEDYKNP 448
            F +ED K  
Sbjct: 462 SFAIEDGKTG 471


>gi|87310876|ref|ZP_01093002.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87286391|gb|EAQ78299.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 507

 Score =  477 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 162/525 (30%), Positives = 240/525 (45%), Gaps = 91/525 (17%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL +   EFQ + P  + +Y+CGPTVY  AHIG+    ++FD + R L Y   
Sbjct: 1   MTIRVYNTLSKTKEEFQTVTPGKVGIYLCGPTVYAEAHIGHMVGPVIFDTVKRYLVYSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V  V NITD+DDK+I++A           ++  + ++N   ++ +   L        
Sbjct: 61  E--VNLVVNITDVDDKLIKKA------TERGISMEEVANENIADYLHNLAALGVDQIDQM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT  +  +I ++  +I  G AY +  ++ F+ +  P YG  + R ++  + G      
Sbjct: 113 PKATETMDGIIAMVAELIEKGFAYASEGDVYFEVTKDPEYGKLTNRTVEAMQ-GEGGEAA 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK++   EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDLIF
Sbjct: 172 SRKRSPGDFALWKKAKAGEPSWKSPWGDGRPGWHIECSAMSKAILGETFDIHGGGLDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLE------------------GRKMSKSNGN 284
           PHHENEIAQS C    +     W+HNG L  +                  G KMS+S G 
Sbjct: 232 PHHENEIAQSECCH-AKPMVKYWMHNGLLRSDPAAGKIGGRAEREGAAEAGGKMSRSGGA 290

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
              + +L+E +           IR  +L THYR  I F+ + + EA I L  + +     
Sbjct: 291 G-GLAKLIERQ-------SGERIRFFLLRTHYRSTILFSEEAIAEAGIGLDSFYRLFERY 342

Query: 341 ---------------STSKGIIDP--------------AVLSALYNDLNTVSAIQALHKL 371
                          +  +G  +P              A L  + +D NT  A+  L ++
Sbjct: 343 ERLTGESFFDLPAAKTRKEGDFEPKKSELLVAIAKHRDAYLEKMDDDFNTGGAVSELFEM 402

Query: 372 ARESTKNHD-----------------LLPIFNASAHILGIEVCKEHLN-----KNISIAI 409
           AR   K  D                    +      ILGI V     +     + +   +
Sbjct: 403 ARLINKTIDQQKLEGDKSADLTNIKKAFSVLRELTGILGIFVTAPEKSSSGDSELVGQLM 462

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           + L+  R    + K F  +D IR +L + G  LED K     +  
Sbjct: 463 QLLIDVRASARQKKDFEMSDVIRDRLTAMGVTLEDRKEGATWRLG 507


>gi|291007003|ref|ZP_06564976.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 453

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 162/467 (34%), Positives = 229/467 (49%), Gaps = 49/467 (10%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
            EF         +YVCG TV    HIG+ R  + +DVL R L +   +  V  VRN+TDI
Sbjct: 2   REFHPRLAGVASIYVCGATVQGVPHIGHVRGGLNYDVLRRWLVHNGYD--VRLVRNVTDI 59

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DDKI+ +A                 + + + F     RL CL P+  PRAT HI QMI L
Sbjct: 60  DDKILTKAAD------AGRPWWEWATAHERAFESAFDRLGCLPPSALPRATGHITQMIEL 113

Query: 136 IQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
           +Q +I  GHAY A  ++ F  +S   +YG  S +++DE + G        K++P DF LW
Sbjct: 114 MQRLIDKGHAYAAGGDVYFSVASYAEHYGRLSGQRLDEVQQGESTA--SGKRDPRDFTLW 171

Query: 195 KRSTPMEPGWESPWGR-GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           K + P EP W +PWG  GRPGWH+ECSAMS++YLG  FDIHGGGLDL+FPHHENE+AQS 
Sbjct: 172 KAAKPGEPSWPTPWGAAGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVFPHHENELAQST 231

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A      A  W+HN ++ + G KMSKS GN + I  +L+          AP IR  ++ 
Sbjct: 232 AAGDG--FARYWMHNAWVTMSGEKMSKSLGNTVAIPAILQRA-------AAPEIRYYLVA 282

Query: 314 THYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLSALYNDLNTVSA 364
            HYR  I+++   L EA     +                 G +     +A+ +DL+T  A
Sbjct: 283 PHYRSTIEYSEPALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAAAMDDDLSTPQA 342

Query: 365 IQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK----------NI 405
           I  +H   RES    D                   ILG++   E               +
Sbjct: 343 IAVVHNAIRESNAALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADTRGADDAAHHAL 402

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           S  +  ++Q+R      + F++AD +R +L++ G  +ED  +     
Sbjct: 403 SELVGSMLQQRQQARAERDFATADAVRDRLQACGIAVEDTPDGPLWT 449


>gi|313682063|ref|YP_004059801.1| cysteinyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154923|gb|ADR33601.1| cysteinyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 465

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/480 (34%), Positives = 249/480 (51%), Gaps = 50/480 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+++++   +F+ +    + +YVCGPTVYD AH+G+A+  +VFD+L R+L     E 
Sbjct: 1   MTIYDSVKKTKLKFEPLREGKVSLYVCGPTVYDDAHLGHAKSALVFDLLRRVLEAEDYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RNITDIDDKII +A++      +    S I  + T  + +D   +   APT +P+
Sbjct: 60  -VLFARNITDIDDKIINKAQE------LGITTSEIAERYTDAYHRDMAAIGVRAPTLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I  M  +IQ ++  GHAY  +N +I FDTSS  NY S S R+  E    +RV +  
Sbjct: 113 ATESIDAMCDMIQKLLDKGHAYSISNGDIYFDTSSDKNYLSLSNRQSSENV--SRVEKVG 170

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL----GK-VFDIHGGGL 238
            K+N ADF LWK        ++SP+GRGRPGWH+ECSAM   Y+    G+   DIHGGG 
Sbjct: 171 EKRNEADFALWKAVHDEGVAFDSPFGRGRPGWHLECSAMIERYVTSNEGEYAIDIHGGGA 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ CA   E  A  W+HNGF+ + G KMSKS GN   + + L      
Sbjct: 231 DLLFPHHENEAAQTRCATNHE-LAKYWMHNGFVTIAGEKMSKSLGNSFFLKDAL------ 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV-- 351
            +++   V+R  +L THYR   +F    L  ++  L +  +        S   I+     
Sbjct: 284 -KAYDGEVLRFYLLSTHYRGDFNFNEDDLIASKRRLDRLYRLKKRIFGLSTDGIETEFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L AL +DLN   A   + +L  ++ +  D           LL        +LG     
Sbjct: 343 NLLEALGDDLNVSRAYALIDELIAQANEALDTNPKDKAYRQILLSSLATVETVLGFGGQD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  L++     I +L+ +R    K K F+++D +R +L + G  + D       +
Sbjct: 403 PYEYFQFGLDEETKTKINELIAKRSEAKKAKDFAASDALRDELTALGVSIMDTPAGTVWE 462


>gi|225010586|ref|ZP_03701057.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
 gi|225005415|gb|EEG43366.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
          Length = 492

 Score =  476 bits (1226), Expect = e-132,   Method: Composition-based stats.
 Identities = 155/486 (31%), Positives = 226/486 (46%), Gaps = 40/486 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +KIYN+L  K   F  I    + MYVCGPTVY   H+GN R  + FD+++R L++  
Sbjct: 6   NNTLKIYNSLSGKKEIFTPITAGYVGMYVCGPTVYSQVHLGNCRTFMSFDMIFRYLKHLG 65

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD     +D      +    +         +  K T  F    T+   L
Sbjct: 66  FK--VRYVRNITDAGHLENDAEEGEDKIAKKARLEQIEPMEVVQKYTVDFHNILTQFNLL 123

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSRRKIDEQK 174
            P+ +P AT HI + I +I  II  G+AY  N  + FD        +YG  S RK+++  
Sbjct: 124 PPSIEPTATGHIIEQIQIIDEIIAKGYAYHVNGSVYFDVQKFNETNDYGKLSGRKLEDML 183

Query: 175 MGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR +  +  KK+P DF LWK++ P     W S WG G PGWH+EC+AMS+ YLGK FD
Sbjct: 184 ANTRSLTAQDEKKSPQDFALWKKAEPQHIMRWHSKWGDGFPGWHLECTAMSTKYLGKTFD 243

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ+   + +      W+H   L L G+KMSKS  N I   E+ 
Sbjct: 244 IHGGGMDLKFPHHECEIAQAEATNGVSP-VKYWMHANMLTLNGKKMSKSTDNNILPGEIF 302

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---- 347
                   + + A V+R  M+  HY   +D + + L  +E   ++  +       +    
Sbjct: 303 SGENNILSKPFTASVLRFFMMQAHYTSILDLSNEALLASEKGHARLMEAFKQLDSVVVGN 362

Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
                    +    SA+ +D NT   I  L +  +E     +               +  
Sbjct: 363 HTDFDLKSWEDKCYSAMNDDFNTPILIAHLFEGVKEINLLKEGNHQISQADKAHFTALLK 422

Query: 387 AS-AHILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           A    +LG+ E  +   N      +E L++ R      K F+++D IR QL + G  L+D
Sbjct: 423 AFVLDVLGLKEGVEMATNSQTPALVEMLIKLRKEARDNKDFATSDAIRDQLLALGIQLKD 482

Query: 445 YKNPDN 450
                 
Sbjct: 483 GAEGTT 488


>gi|300934657|ref|ZP_07149913.1| cysteinyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 482

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 150/493 (30%), Positives = 239/493 (48%), Gaps = 64/493 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T  R++ +F+ +   +  +Y+CG TV    HIG+ R  + FD+L   L+    + 
Sbjct: 6   LRIYDTATRQLRDFEPVREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLQAKGLD- 64

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN+TDIDDKI+ +A +               + + + F     +L    P+ +PR
Sbjct: 65  -VAFVRNVTDIDDKILTKAAEN------GRPWWEWAATHERAFSWAYDQLGVAPPSIEPR 117

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIPQMI  +Q II +GH Y A+  +    ++I NYG  S +K+DE   G        
Sbjct: 118 ATGHIPQMIEYMQRIIDNGHGYAADGNVYAQPATIQNYGFLSGQKLDEMDQGESA--GTG 175

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG  FDIH GGLDL FPH
Sbjct: 176 KRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGGEFDIHCGGLDLQFPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+  A   ++ A  W+HNG++ + G KMSKS GN ++I  +L+  +        
Sbjct: 236 HENEAAQATAA--GDRFARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR-------P 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------KGI 346
             +R  +   HYR  ++++   L EA     +  +                       G 
Sbjct: 287 VELRYYLGSGHYRSMLEYSETALGEAAAGYRRIEKFLLRTAASLSDSDATSLPEIIPTGE 346

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHILG 393
           +  A  + + +DL    A+  +H+  RE  K  +             +     A A +LG
Sbjct: 347 VTDAFAAKMDDDLAVPQALALIHERVREGNKLLEGKVDDAKRAQLQKIGGEVRAMAAVLG 406

Query: 394 IEVCKEHLNK--------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           ++   +   +               + + ++  +  R      K +++AD +R +L   G
Sbjct: 407 VDPFSDTWLESTKAAAGGSDAAMGALDVLVKSELARRAEARAAKDWATADEVRDRLAESG 466

Query: 440 FILEDYKNPDNGQ 452
             + D  +     
Sbjct: 467 IEVTDTADGAKWA 479


>gi|320105196|ref|YP_004180787.1| cysteinyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319752478|gb|ADV64238.1| cysteinyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 497

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 174/516 (33%), Positives = 245/516 (47%), Gaps = 81/516 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I ++NTL +     + ++P  +RMYVCGPTVY  +H+G+    ++FD L R L Y   
Sbjct: 1   MTIHLHNTLSQTKEPLRTLEPGKVRMYVCGPTVYSASHVGHMVGPVIFDTLKRFLTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V NITDIDDK+I +A ++         +  +  + T  +VK    L      H 
Sbjct: 61  Q--VTWVVNITDIDDKLIVQANKD------GVTVKSLAEQVTADYVKCLEALGVDGIDHM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT HI  ++ + Q +I  G+AY +  ++ FD +    YG  S R  +    G RV   
Sbjct: 113 PKATEHIDHILEMTQGLIDKGYAYASGGDVYFDVTKAEEYGKLSHRDPEALLAGNRVEPS 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            HK++P DF LWK + P EP WESPWG GRPGWHIECSAMS   LG   DIHGGGLDL+F
Sbjct: 173 SHKRHPGDFALWKAAKPGEPFWESPWGPGRPGWHIECSAMSRSLLGDQIDIHGGGLDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI-NELLETKKFGGRS 301
           PHHENE+ QS C    +  A  W+HNG L  +GRK+SKS+ + I +  +LL         
Sbjct: 233 PHHENEVVQSECFTGRKPFATFWLHNGLLTKDGRKISKSDPDTIVLMRDLLG-------K 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQT------------ST 342
           +    +R   LM HYR P D+  QRL E E  L        ++ +             + 
Sbjct: 286 YQPDTLRALFLMGHYRRPTDYGNQRLDEIERGLQAFFIFSERFERITGRSFYTLPAPQTD 345

Query: 343 SKGIIDP--------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---- 384
           S+G  DP                L AL +D NT      L +L R   +  D + +    
Sbjct: 346 SEGEFDPGDSDFLKTIRDHRLKFLEALDDDFNTGGGFGELFELLRTLNRFADRVGLERAD 405

Query: 385 -----------------FNASAHILGIEVC----KEHLNKNISIAIEKL-VQERLILLKM 422
                                  + G+       K   +  ++  + +L +  R  L K 
Sbjct: 406 APHRADALAQFERGVTVLRELTRLFGLFRAAPRSKTTGDDQLTAGLMRLVIDLRASLRKE 465

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           K F+ AD IR++L      LED      G   TRW+
Sbjct: 466 KNFALADEIRRRLAELNVTLED------GPGGTRWR 495


>gi|183221111|ref|YP_001839107.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911202|ref|YP_001962757.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775878|gb|ABZ94179.1| Cysteine--tRNA ligase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779533|gb|ABZ97831.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 485

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/493 (32%), Positives = 230/493 (46%), Gaps = 61/493 (12%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           NT   K   FQ  DP+++ +Y CGPTVY+FAHIGN R  +  DVL R L    G   +  
Sbjct: 10  NTKSGKKEPFQPKDPNSVTIYSCGPTVYNFAHIGNIRSFLFVDVLRRAL--LLGGYKLNQ 67

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
             NITDIDDKII+ +      I  N ++   T   T  F KD   L      H P+AT  
Sbjct: 68  SMNITDIDDKIIKES------IKQNVSVEEFTKPWTDAFFKDLETLQVQKLEHYPKATES 121

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKN 187
           I  M+ L++ +  +G AYE +  + F       YG  S+  +   K G R   ++Y K +
Sbjct: 122 IDDMVTLVETLQSNGLAYERDGNVYFSIQKFNQYGELSKIDVSGMKSGVRYDADEYEKDD 181

Query: 188 PADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
             DF+LWK      E  W +  G GRPGWH+ECSAM     G   DIH GG+DL+FPHHE
Sbjct: 182 VRDFVLWKNQKTKEEKCWHTRIGMGRPGWHLECSAMIRKIYGTGIDIHTGGIDLLFPHHE 241

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NE AQS  A   E     W+H   L ++G KMSKS GNF T+ ++L       + +    
Sbjct: 242 NEFAQSVGAYPEETFVGTWLHCEHLLVDGEKMSKSKGNFYTLRDILN------KGFEPRA 295

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------------TST 342
           IR  ++  HYR  ++F++ +L E+++ L +                           T  
Sbjct: 296 IRFHLISAHYRSKLNFSLGKLEESKVALDRIQNTIFRLLELNPSVDLNTNDWNQIHFTDP 355

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FN 386
               +D   L+A+ +DLN   A+  L++  R   ++ D                     N
Sbjct: 356 EIQTLDSDFLNAIADDLNVPKALATLYEFVRLVNQSLDQTKEKNADEFFKQCLGFFYKIN 415

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +   +   E  KE L+      I   +  R +  + K F++AD IRK+LE  G +L D K
Sbjct: 416 SLFAVFSFEKQKETLDGISEDWILDQIANRKLAKQNKDFATADNIRKELEKIGILLTDTK 475

Query: 447 NPDNGQRMTRWKQ 459
             +     T WK+
Sbjct: 476 EGN-----TTWKK 483


>gi|70605996|ref|YP_254866.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363434|sp|Q4JCA6|SYC_SULAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|68566644|gb|AAY79573.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 469

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 166/485 (34%), Positives = 238/485 (49%), Gaps = 54/485 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++YNTL R+I  F++ DP  ++MYVCGPTVYD+ HIG+ R  + FD + R L+    
Sbjct: 2   NPLRLYNTLGRRIETFESFDPLTVKMYVCGPTVYDYVHIGHGRAFVGFDGIVRYLKLRGF 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V+NITDIDDKII+RA +             I    T+ +++    L        
Sbjct: 62  N--VIRVQNITDIDDKIIKRANE------TGKDWREIVDYYTKDYMESLKALKVEI-DQH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR T+HI ++I  +Q ++  GHAY  ++  + FD  S P+YG  S  K +E   G     
Sbjct: 113 PRVTSHIQEIIDFVQKLVDKGHAYITSSGSVYFDVDSFPSYGLLSGSKKEEWNQGE--EI 170

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              KKNP DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG+DL+
Sbjct: 171 VKEKKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGEQFDIHGGGVDLV 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS      +     W+H  +L +   KMSKS GN I +NE L       + 
Sbjct: 231 FPHHENERAQSESLLG-KIWVKYWVHVAYLTINKEKMSKSLGNIIPLNEAL-------KK 282

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
           W   V+R   L T YR  ID++ Q L +A   L +          +              
Sbjct: 283 WGPSVLRFWYLSTKYRNSIDYSEQTLEQARSSLQRLKDAMGIIRSVIKEEPKSHSNEEEI 342

Query: 351 ------------VLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFNAS 388
                          A+ ND +T +A+  ++++A          R+          F   
Sbjct: 343 STQREIISLIGKFHEAMSNDFDTATALSNIYEIANLVFTKIQYTRDFMGAMLAFDAFRQF 402

Query: 389 AHILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++ G+   +   + + +   I+ +V+ R IL   K +  +D IR  L + G  + D K 
Sbjct: 403 NYVFGVMDEEFSPSYETMYKVIDSVVEIRNILRARKMYDLSDEIRSVLANAGIKILDGKE 462

Query: 448 PDNGQ 452
               +
Sbjct: 463 KSTWR 467


>gi|78213484|ref|YP_382263.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|109894956|sp|Q3AI74|SYC_SYNSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78197943|gb|ABB35708.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 493

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 170/512 (33%), Positives = 240/512 (46%), Gaps = 75/512 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++  N+L  +   F+ +      +Y CG TVYD  H+G+AR  I +DVL R L +   
Sbjct: 1   MSLRFTNSLTSRTEAFEPLTEGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTY++N TDIDDKI+ RA +E         +  ++ +N + F  D  RL  L     
Sbjct: 61  D--VTYIQNYTDIDDKILNRANEE------GITMQAVSERNIEAFEVDMGRLNILPADRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
           PRAT  I  +  LI  +   G AY ++ ++ FD S   NYG  S R  D+Q+ G      
Sbjct: 113 PRATGCIEGIQTLISELESKGAAYSSDGDVYFDISKAKNYGKLSGRDPDDQQQGASGRTA 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             E+  K++P DF LWK +   EP WESPWG GRPGWHIECSAM    LG+  DIH GG 
Sbjct: 173 DGEESRKRHPFDFALWKGAKAGEPSWESPWGPGRPGWHIECSAMVRQELGQTIDIHLGGG 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENEIAQS  A+     A +W+HNG +N+ G KMSKS GNF TI  LL++    
Sbjct: 233 DLVFPHHENEIAQSETANGT-TLAKLWMHNGMVNVGGTKMSKSLGNFTTIRALLDS---- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQ--------- 339
                   +RL +L  HYR+P+DF            + L  A  L  +  +         
Sbjct: 288 --GISPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALSLGGRHGESLGWSTAAP 345

Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
                         T+   ++   +SA+ +DLN+   +  L  LA+      + L     
Sbjct: 346 LAEGAMNADGGPADTALVELEQRFISAMDDDLNSSGGLAVLFDLAKPLRSLANRLERGED 405

Query: 384 ----------------IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
                           +    A +LG+    E        AI+  +  R      K F+ 
Sbjct: 406 AALPELELKGLEGRWQLLRHLAAVLGLRSEAEAAPSLDDGAIDVAIAARKAAKAAKDFAE 465

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           AD IR +L ++G  L D         +T W +
Sbjct: 466 ADRIRDELAAQGVELIDKPGG-----VTEWIR 492


>gi|269217459|ref|ZP_06161313.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269213080|gb|EEZ79420.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 501

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 154/495 (31%), Positives = 235/495 (47%), Gaps = 62/495 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +KIY++    + +F+ ++P    +Y+CG TV    HIG+ R  + FDVL R LR    +
Sbjct: 29  SLKIYDSAAHSLRDFEPLEPGRAGIYLCGATVQGAPHIGHMRSALAFDVLARWLRRSGYD 88

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  +RN+TDIDDKI+ ++ +                +  ++F +    L  L PT++P
Sbjct: 89  --VRMIRNVTDIDDKILRKSAE------AGRPWWEWAYRFEREFSQAYRTLGVLPPTYEP 140

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           RAT HI   I LIQ I+  GHAY  +   + FD +S+P+YGS +R+ +    +      +
Sbjct: 141 RATGHIADQIELIQAILDAGHAYVGDPGNVYFDVASLPDYGSLTRQSLANMTVDES-DVE 199

Query: 183 YHKKNPADFILWKRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             K+NP DF LWK   P EP   +     GRGRPGWHIECSAM+  YLG+ FDIHGGG+D
Sbjct: 200 PDKRNPHDFALWKAPKPGEPATAAWAAPWGRGRPGWHIECSAMAGRYLGETFDIHGGGID 259

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE AQS  A R    A  W+HN ++ +EG KMSKS GN +T+  +        
Sbjct: 260 LRFPHHENEQAQSHAAGRG--FARYWMHNAWVTIEGEKMSKSLGNSLTVEAV-------A 310

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------- 346
           R  P  ++R A+   HYR  + ++   L EA+ +  +                       
Sbjct: 311 REVPPVILRFALGTVHYRSTVAYSPATLAEAQAVWDRLAGFVARAAESEEIGLDEVASLG 370

Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGI 394
              +     +A+ +DLN   A+ A+H+   +                     +   ILG+
Sbjct: 371 PDRLPAEFTAAMDDDLNVSGALAAVHEAVTKGNTALSERDSAGVRRAQLEVRSMLDILGL 430

Query: 395 EVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           +                K +   +  +++ R      K +++AD +R  L + G ++ED 
Sbjct: 431 DPLSPQWRSGAGSDAVGKALDALVADMLERRAQARAAKDWATADAVRDSLSAAGVVVEDS 490

Query: 446 KNPDNGQRMTRWKQK 460
                     RW  +
Sbjct: 491 ------PEGARWHVE 499


>gi|27262230|gb|AAN87396.1| Cysteinyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 454

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 147/443 (33%), Positives = 216/443 (48%), Gaps = 64/443 (14%)

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V Y++N TDIDDKII RA +      + +    + ++  +++ +D   L     T 
Sbjct: 30  YRYEVDYIQNFTDIDDKIINRANE------VGEDPIQLAARFVEEYFQDAKALNVRPATV 83

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            P+ + H+  +I +I+ +   GHAYE   ++ F   S  +YG  S R  ++ + G RV  
Sbjct: 84  HPKVSTHMGDIIAMIRRLEEKGHAYEMEGDVYFSIPSFKDYGKLSGRSQEDMQAGARVEV 143

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK+  P EP W+SPWG+GRPGWHIECSAMS  YLG  FDIHGGG DLI
Sbjct: 144 DERKRHPMDFALWKKVKPGEPSWDSPWGKGRPGWHIECSAMSQKYLGDTFDIHGGGQDLI 203

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS         A  W+HNGF+ +   KMSKS GNF T+ ++L       + 
Sbjct: 204 FPHHENEIAQSEACTSTAPMARYWLHNGFITVNQEKMSKSLGNFFTLRQIL-------KK 256

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPA 350
           +   V+R  +L THYR P+DF   +L  A+  L +              ++   G   PA
Sbjct: 257 FSGDVVRFYLLSTHYRSPLDFDDTKLEAAQKGLQRLRTGRRLLEEALKDSARQSGNNRPA 316

Query: 351 ----------------VLSALYNDLNTVSAIQALHKLARESTK---------------NH 379
                              A+ +D NT  A+  L  LARE+                   
Sbjct: 317 AQREKLADQWTKTKNDFREAMDDDFNTALALSLLFDLARETNAFLHGGEGLGAEDLQLLR 376

Query: 380 DLLPIFNASAHILGIEV---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
            +   F+  + ++GIE+    +   +  +   ++ L+  R    K K +++AD IR  L+
Sbjct: 377 HVAETFDQLSGVMGIELSETAEAADDSLVDGLMDLLISLRAEARKKKDWATADKIRDGLK 436

Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
               I+ED        +  RWK+
Sbjct: 437 ELAIIIEDT------PQGARWKK 453


>gi|170290560|ref|YP_001737376.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170174640|gb|ACB07693.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 472

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 146/486 (30%), Positives = 244/486 (50%), Gaps = 53/486 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + ++NTL R+   F+ +    + M+VCGPTVYD++H+G+AR  + +D L R LR     
Sbjct: 6   DLVVFNTLTRRFEPFEPLVGRRVFMFVCGPTVYDYSHLGHARTYVFYDTLARFLRKLGY- 64

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + Y++NITD+DDKI+ RA +E            +  +    + +D   L   +     
Sbjct: 65  -SLFYLQNITDVDDKIVNRAAEE------GRDPVELAREFESYYYEDMRALNITSVNLYA 117

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RA++++ ++   ++ +I  G AY   + + FD ++ P+YG  S ++ +E ++  R+    
Sbjct: 118 RASDYLKEIFEQVETLIKLGKAYVTESGVYFDITTFPDYGKLSGQRPEELRVH-RIEPDP 176

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LW+     E GWESPWG GRPGWHIE +A+S  + GK +DIHGG ++L FP
Sbjct: 177 TKRNPGDFALWRNRPREEFGWESPWGYGRPGWHIEDTAISIKHFGKQYDIHGGAIELAFP 236

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EIAQ+      +     WIH G L +EG KMSKS GNF+TI E L       R + 
Sbjct: 237 HHEAEIAQAESFTGEKPFVKYWIHTGLLTVEGEKMSKSLGNFVTIREAL-------REYD 289

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------------- 348
           A  +R+ +L  HYR PIDF  + L +A     +      +   ++               
Sbjct: 290 ANTLRIFLLSRHYRSPIDFRWEYLEQARSSYERIINCLENLKELEIGEEGDEEREFLSRV 349

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASAHIL 392
                +    + +D+NT  A+  L++L R+                ++++  F+    +L
Sbjct: 350 RERRDSFYRRMLDDVNTAEALGELYELVRDVNSFSERMGKISEAGRNEVISTFSELLDLL 409

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           G+ + +      +   I  ++  R  L + +++  AD IR ++   G  ++D        
Sbjct: 410 GLRIEEGPDTSMLHALISLILDVRENLRRRREYDLADEIRGRMRELGIDVQDT------P 463

Query: 453 RMTRWK 458
           + T+W+
Sbjct: 464 KGTKWR 469


>gi|89897982|ref|YP_515092.1| cysteinyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|109894891|sp|Q255U1|SYC_CHLFF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|89331354|dbj|BAE80947.1| cysteinyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 476

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 160/486 (32%), Positives = 246/486 (50%), Gaps = 52/486 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + + +YNT  R    F A +   +++Y CGPTVYD+AHIGN R  +  D+L R L   +
Sbjct: 8   SQNLYLYNTATRTKELFSASNAP-VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LF 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V ++ NITD+DDK +  A         N ++   T+   Q F +D   L  L    
Sbjct: 65  FGYSVKHIMNITDVDDKTLAGA------CRKNISLEEYTAPFIQAFFEDIAELNILPADV 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
            P AT++IPQMI  IQ ++    AY   ++ + F     P YG  S+ K+ + +  +RV 
Sbjct: 119 YPHATHYIPQMIKAIQKLLDENIAYIGQDSSVYFSIKKFPTYGKLSQLKLQDLQCCSRVT 178

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K+N +DF+LWK           WESP+G+GRPGWH+ECS M+   LG   DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYDEQRDGHIYWESPFGKGRPGWHLECSIMAMELLGSSIDIHAG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+   
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-KPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKG 345
              R +    IR  +L +HYR  ++FT + L      L +            P+++T   
Sbjct: 295 ---RGFSGEEIRYLLLQSHYRMQLNFTEEGLLACRQALKRLRDFISRLENPYPESTTISD 351

Query: 346 IIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
            ID        A   ++ NDLN  +A+ AL     ++    D           +L +   
Sbjct: 352 EIDQQGKTFLKAFSDSIANDLNIAAALAALFDFIHQTNSFIDKSKFTQADANYILDLLKK 411

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LGI   +    + I   + +LV++R +  + K ++ AD  R Q+ S G+++ED K+
Sbjct: 412 INTVLGI--LQFSATQEIPDEVMQLVEKREVARREKNWAQADAFRDQVASLGYLIEDSKS 469

Query: 448 PDNGQR 453
               ++
Sbjct: 470 GPKVKK 475


>gi|218295459|ref|ZP_03496272.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244091|gb|EED10617.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 480

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/493 (32%), Positives = 247/493 (50%), Gaps = 54/493 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IY+T++RK   F+   P ++ +YVCGPTVY   H+G+AR  IV+DVL R   +   
Sbjct: 1   MGLVIYDTMQRKKVPFEPATPGHVGIYVCGPTVYADPHLGHARGPIVYDVLRRYFLHKGY 60

Query: 63  EKCVTYVRNITDIDDKIIE---RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           +  V +V NITD+     +     +    +         +  K T  +      L  L P
Sbjct: 61  K--VRFVSNITDVGHLTEDDEGEDKVAKRAKLEKLEPMEVAEKYTWSYFDAMAALNVLRP 118

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           +  PRA+ HIP+M  L Q ++  G AY     + F   + P YG  S ++ +E + G RV
Sbjct: 119 SIAPRASGHIPEMWELTQKLLERGVAYVREGSVYFRVRAFPEYGKLSGKRPEELRAGARV 178

Query: 180 PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
             +  K++P DF LWKR+ P     W+SPWG G PGWHIEC+AMS  YLG+ FD+H GG+
Sbjct: 179 EVREEKEDPLDFALWKRAEPGHLMRWKSPWGEGYPGWHIECTAMSLKYLGEGFDLHAGGI 238

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHE EIAQ+  A    + A  W+H+  + LEG KM+KS GN + +++LL      
Sbjct: 239 DLQFPHHECEIAQAEAA--GYRFARHWMHHNHVLLEGEKMAKSTGNLVLLHDLL------ 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQ 339
            R+     +R  +L THYR P+DFT   L  A+   ++                    P+
Sbjct: 291 -RAHEPMAVRFYLLQTHYRSPMDFTFAGLEAAKKGYARLLNAYREVRARKKTAPKGTTPE 349

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQ-------ALHKLARESTKN--HDLLPIFNASAH 390
              +   ++   ++A+ +DL+T  A+         LH+L  E+ +         F+    
Sbjct: 350 LERALEALEKGFMAAIEDDLSTPEALAQFFTFLPELHRLLPEAREESLRRAEEAFHTLGE 409

Query: 391 -ILGI---EVCKEHLNK-NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            ILG+    V +E L+   +   I  L++ R    + K ++ +D IR +L++ G I+ED 
Sbjct: 410 GILGLFPERVLEEKLSGPLLEGLIGLLLELREEARRAKDYAKSDLIRDRLKALGVIVEDT 469

Query: 446 KNPDNGQRMTRWK 458
           K         RW+
Sbjct: 470 KEGP------RWR 476


>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 495

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 167/506 (33%), Positives = 242/506 (47%), Gaps = 71/506 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +I++Y+++ R+  +F+ + P    +Y+CGPT Y  AH+G+A   I FDV+ R L +   
Sbjct: 2   TQIRLYDSIRREKVDFEPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALSWLGF 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+VRNITD++DKI  RA +        +    +  +   ++  D  R   LAP  +
Sbjct: 62  E--VTFVRNITDVEDKIFARAAEN------GEEPLALAERFAAEYNADMARFGVLAPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HI  ++ LIQ II +G AY  + ++ F   +   YG  S + +D+ + G RV   
Sbjct: 114 PRVSTHIEDIVGLIQGIIDNGAAYPVDGDVYFSVEAFKPYGQLSGQSLDDLRAGARVEVD 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK PADF LWK + P E  W++PWGRGRPGWHIECSAMS  +LG+ FDIHGGG DL+F
Sbjct: 174 ARKKAPADFALWKSAKPGELAWDAPWGRGRPGWHIECSAMSLRHLGQTFDIHGGGKDLVF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+HNGFLN  G KMSKS GN     ++ +         
Sbjct: 234 PHHENEIAQSQAAHGEDTFARYWMHNGFLNFSGEKMSKSLGNVFGCRQIADAVG------ 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQ---------RLTEAEILLSKWPQTST----------- 342
               +R   +  HYR P++F V           L  A+  L  +  T             
Sbjct: 288 -PEALRFFSVSHHYRSPVNFEVDEVDGVTVFRDLEVADRRLDYFYSTLRRLDDFLATGKD 346

Query: 343 --------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------- 380
                       + PA   AL +D NT   I AL + A+ + K  D              
Sbjct: 347 PGEGEVVPEADKLVPAAREALADDFNTPIVIAALGEAAKLANKLLDEPKSAPKPVRRRTL 406

Query: 381 --LLPIFNASA---HILGIEVCK---------EHLNKNISIAIEKLVQERLILLKMKKFS 426
             L            +LG E                      +  L+++R    K K F+
Sbjct: 407 QKLARELREVGSAIGVLGSEPAAFLGERRNRLAAKRNIDPAEVATLLEQRAEARKAKDFA 466

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQ 452
           +AD +R Q+++ G  + D  +  + +
Sbjct: 467 AADALRDQIKALGVEVLDTAHGVDWK 492


>gi|325681471|ref|ZP_08160997.1| cysteine--tRNA ligase [Ruminococcus albus 8]
 gi|324106961|gb|EGC01251.1| cysteine--tRNA ligase [Ruminococcus albus 8]
          Length = 470

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 163/481 (33%), Positives = 236/481 (49%), Gaps = 50/481 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL  K+ EF       + MY CGPTVY FAHIGN R  I+ DVL + +R+   + 
Sbjct: 1   MRIYNTLSHKVEEFVPNTAGKVAMYTCGPTVYHFAHIGNLRSYIMEDVLEKYMRWQGLD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F  D  +L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTVM------EIAKFYTDAFFTDCAKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT +I + I +I ++I  G+AYEA   I FDTS +  Y  F     ++ +
Sbjct: 113 NIKTPDVVAPATTYIDEFIKVISSLIEKGYAYEAGGNIYFDTSKLDEYYVFHNFSAEDLE 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  WESPWG G PGWHIECS +S   LG+
Sbjct: 173 VGVREGVEEDTNKRNKADFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSCISMKNLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D IFPHH NEIAQS       K  N W H   LN +  KMSKS G F+T++
Sbjct: 233 YLDIHCGGVDNIFPHHTNEIAQSEAYIG-HKWCNYWFHVHHLNTDTGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------- 339
            L E      + +   V R   L +HYR+ + F+ + L  A+    K             
Sbjct: 292 LLEE------KGYDPLVYRFFCLQSHYRKSLVFSWENLDNAKTAYEKLTARIASLMSGDK 345

Query: 340 ---TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
               S     +     +A+ +D+NT + I AL+ + +  T     L +      +L + +
Sbjct: 346 GEVISADFDALKAKFTAAMDDDINTSNGITALYDVLKADTTPATKLALIEDFDKVLSVGL 405

Query: 397 CK-------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            K       E    +I   +  LV+ER    K K F+ AD IR ++ + G+ +++ +   
Sbjct: 406 IKAAEKQNEEKSGGDIPAEVMALVEERQAARKAKDFAKADEIRDKIAALGYAVKETRQGT 465

Query: 450 N 450
            
Sbjct: 466 E 466


>gi|227547937|ref|ZP_03977986.1| cysteine--tRNA ligase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227079948|gb|EEI17911.1| cysteine--tRNA ligase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 485

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 151/481 (31%), Positives = 237/481 (49%), Gaps = 53/481 (11%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T  R+   F+ +   ++ +Y+CG T     HIG+ R  + FD++ R       +  
Sbjct: 21  RIFDTSARRSRVFEPVREGHVSIYLCGATPQSSPHIGHLRSGVAFDIVRRWFLAKGYD-- 78

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +VRN+TDIDDKI+ +A +               S   ++F +    L  L P+ +PRA
Sbjct: 79  VAFVRNVTDIDDKILAKAAEN------GRPWWEWVSTYEREFTRAYNLLGVLPPSVEPRA 132

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVP 180
           T H+ QM+  ++ +I +G AYEA   + FD ++       +YGS S  +++E + G   P
Sbjct: 133 TGHVTQMVDYMRRLIDNGFAYEAAGSVYFDVAAWVRAEGSDYGSISGNRVEEMEPGE--P 190

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K+ P DF LWK + P EP W +PWG GRPGWHIECSAM++ YLG  FDIH GGLDL
Sbjct: 191 DNRGKRGPHDFALWKAAKPGEPSWPTPWGEGRPGWHIECSAMATWYLGGSFDIHAGGLDL 250

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQS  A      A  W+HN ++ + G KMSKS GN ++I+ +L T +    
Sbjct: 251 QFPHHENEQAQSHAAGDG--FATYWMHNHWVTMAGEKMSKSLGNVLSIDNMLSTVR---- 304

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSAL 355
                 +R  +   HYR  ++++ + L+EA     +        G  +     P    AL
Sbjct: 305 ---PVELRYYLGSAHYRSVLEYSPEALSEAAAGYRRIEDFVARAGTPEKTTWTPQFEQAL 361

Query: 356 YNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCK-------- 398
            +D +   A+  +H   RE  K           ++     A A +LG++  +        
Sbjct: 362 NDDFSVPKALAEIHNHVREGNKALAAGDGARASEIAGGVRAMAAVLGVDPGEWARAAGEG 421

Query: 399 -------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                  E  NK + + +   ++ R      K ++SAD +R +L + G  + D  +    
Sbjct: 422 VGGASSSEAANKALDVLVAAELERRAAARAEKDWASADAVRDRLAAAGIDITDTADGPQW 481

Query: 452 Q 452
            
Sbjct: 482 A 482


>gi|58697305|ref|ZP_00372667.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536329|gb|EAL59815.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 415

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 183/429 (42%), Positives = 253/429 (58%), Gaps = 36/429 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+  VTYVRNITDIDDKII  A ++ 
Sbjct: 1   MYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK--VTYVRNITDIDDKIINAASEK- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N  I  IT+   + F  D   + C  PT++P+AT ++  +I LI++++  GHAYE
Sbjct: 58  -----NSNIESITTYYIKAFHDDMESINCKKPTYEPKATENVDYIIKLIEHLLQSGHAYE 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---- 203
           ++  + F+  S   YG+ S +K DE   G+RV    +KK+P DF+LWK +  ++      
Sbjct: 113 SDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENKKHPGDFVLWKPANDIDYKLSSY 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL FPHHENEIAQS  A      A 
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAGSMFAK 232

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGFL +   KMSKS  N + + +LL++   G       VIR A+L THYR+P+D+T
Sbjct: 233 YWMHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG------EVIRYALLKTHYRKPLDWT 286

Query: 324 VQRLTEAEILLSKWPQTS---------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
              +++A+  L+K+ + S          S   I    + AL NDLN   A+  LH++A +
Sbjct: 287 ENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDFIDALKNDLNIPEALAILHEMAAK 346

Query: 375 STKNHD------LLPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKF 425
             K  +      L   F  SA  +G+      +          IE+L+  R    + K +
Sbjct: 347 INKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDY 406

Query: 426 SSADYIRKQ 434
           ++AD IR Q
Sbjct: 407 NTADKIRDQ 415


>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 511

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 175/518 (33%), Positives = 248/518 (47%), Gaps = 83/518 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++K+YNT+ ++      I P  I +YVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 5   KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLG 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V +VRN TD+DDKII RA +        +    ++++  ++++ D   L CL PTH
Sbjct: 65  YE--VNFVRNFTDVDDKIIIRANEN------GEDPLDLSNRFCEEYLVDMGALQCLLPTH 116

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR + H+  +I +I+ II     Y    ++ F     PNYG  S + ++  + G RV  
Sbjct: 117 QPRVSEHMDHIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+HYL   FDIHGGG DL 
Sbjct: 177 DSRKRNPADFALWKAAKPEEPSWESPWGPGRPGWHIECSAMSAHYLSPKFDIHGGGADLK 236

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG + +   KM+KS  NF TI E+         S
Sbjct: 237 FPHHENEIAQTCAA-CEDSGVNYWLHNGHVTINNEKMAKSKKNFKTIREITA-------S 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
           +    +R  ++   YR P+ F+  +L  +   L    QT                     
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFSASQLESSSDALYYVYQTLQDLDEDLSPYREALSEDGGK 348

Query: 347 -------------IDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNHDLLPIF------- 385
                        +     S + +DLNT   +  A     +    N   L          
Sbjct: 349 AEQTPEGKDIIKKLKSEFESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQKKQRMS 408

Query: 386 ------------NASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILL 420
                            +LG+       EV KE   K +         I + +++R+   
Sbjct: 409 MLVSLVEIEKAAREVLDVLGLLTTLSYAEVLKEMKLKTLIRAEMGEEDILREIEDRITAR 468

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K F+ +D IR++L  KG  L D+       + T W+
Sbjct: 469 NNKDFAKSDEIREKLTRKGIALMDF------GKETVWR 500


>gi|283781355|ref|YP_003372110.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283439808|gb|ADB18250.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 515

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 157/526 (29%), Positives = 233/526 (44%), Gaps = 86/526 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL +    F  +    + +Y+CGPTVY  +HIG+    ++FD + R L Y   
Sbjct: 1   MSIRVYNTLSKTKEPFVPVVAGKVGIYLCGPTVYKESHIGHMVGPVIFDTIKRYLTYCGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V NITD+DDK+I + R+       N  +S I ++    ++ +   L        
Sbjct: 61  Q--VTWVVNITDVDDKLIGQMRER------NLPMSEIAAEMVVDYLNNLKALGVDQIDRM 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT ++  +I  I+++I    AY A  ++ FD      YG  S R  D Q+ G      
Sbjct: 113 PKATEYMDDIIRFIEDLIKKDFAYAAGGDVFFDVGRDAQYGKLSNRSADSQQ-GEGGEAA 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P+DF LWK + P EP W+SPWG+GRPGWHIECSAMS   LG+ FDIHGGGLDL+F
Sbjct: 172 SRKRSPSDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSRAILGETFDIHGGGLDLVF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLN-------LEGRKMSKSNGNFITINELLETK 295
           PHHENE+AQS C    +   N W+HNG L        + G+   +         ++  + 
Sbjct: 232 PHHENELAQSECCSG-KPMVNFWMHNGLLRASSAAGKVGGKGDREEAAAPQPAGKMSRSG 290

Query: 296 KFGG-----RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------- 339
             GG            IR  +L THYR  + +  + L E+   L  + +           
Sbjct: 291 GAGGLADVIAEQGGERIRFFLLKTHYRSTVVYGPEGLEESSTALESFYRFFERFQRITKQ 350

Query: 340 --------TSTSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLARESTK 377
                        G  DPA               L  + +D NT  A+  L ++ RE  K
Sbjct: 351 RFFNLPPTLKREDGEFDPAGDPLLTLVHGFRQGFLEKMDDDFNTGGAMSDLFEMVREMNK 410

Query: 378 NHD--------------------LLPIFNASAHILGIEVCKEHL-----NKNISIAIEKL 412
             D                              ILG+ + +        +  +   ++ +
Sbjct: 411 FADQNKLDEVTQLPHPQVAILVKAAKTLRELTSILGLFLSQPAKRGGGGDAVLPKVMQLM 470

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           ++ R      K F++AD IR  L   G  LED K        T W+
Sbjct: 471 MELRTEARNRKDFATADRIRLGLAEMGIALEDRK------GTTEWR 510


>gi|301167823|emb|CBW27408.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 487

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 161/508 (31%), Positives = 235/508 (46%), Gaps = 72/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KIYNTL R   EF+ +    +++Y+CGPTVYD  HIGN R  I F+++   L     
Sbjct: 1   MSLKIYNTLSRSKEEFKPLVEGKVKLYLCGPTVYDLLHIGNFRGAITFNLVRNWLELSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V N TD+DDKII+RA  E     +      I+ K   +F KD  RL     TH 
Sbjct: 61  D--VTFVYNYTDVDDKIIKRANDEGVEPIV------ISEKYIAEFEKDFNRLGLKKHTHN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T  + ++I  ++ +I +  AYE + E+ +   +  +YG  S++ +DE   G RV   
Sbjct: 113 PKVTEFMDEIINYVETLIKNDKAYEIDGEVFYAIDNYTDYGKLSKKNLDELNAGQRVEVD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM    LG+  DIHGGG+DLIF
Sbjct: 173 SRKRNPYDFVLWKPSKEGEPHWTSPWGEGRPGWHIECSAMIKAILGETIDIHGGGIDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQ    +  +   N W+HN F+NL+  KMSKS GN IT    ++        +
Sbjct: 233 PHHENEIAQGEGCNCTK-YCNYWMHNEFINLKDEKMSKSLGNVITGRAFMD-------QY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
              V++  ML  HYR   + T +++ +    L +  +T  +   I               
Sbjct: 285 HPEVLKFLMLSAHYRSNFNVTDEKIHQVISGLRRVYETLATVDTILDTFEKSESGKVNKN 344

Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLAREST------------------KNHDL 381
                   D  +  +L +D +T   +  + ++ R                        D 
Sbjct: 345 FQTTLTNSDAKIKKSLDDDFSTAEVVATIFEVVRTFNGLNLLKKKKDVNSWTTAKAFKDW 404

Query: 382 LPIFNASAHILGIEVCKEH--------LNKNISIA-IEKLVQERLILLKMKKFSSADYIR 432
           +  +     +   E  +            KN+    I +LV+ R    + K +  AD  R
Sbjct: 405 IQRYGQMMALFQEEPVQFLSSIDDIMIKEKNLDREKILELVKMREEARENKDWDKADEAR 464

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
             L + G    D           +W  K
Sbjct: 465 DALHAMGIDFSDT------PEGVKWNVK 486


>gi|312194278|ref|YP_004014339.1| cysteinyl-tRNA synthetase [Frankia sp. EuI1c]
 gi|311225614|gb|ADP78469.1| cysteinyl-tRNA synthetase [Frankia sp. EuI1c]
          Length = 506

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 157/520 (30%), Positives = 234/520 (45%), Gaps = 88/520 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R L     
Sbjct: 1   MSLHLYDTRTRRVRPFEPLRPGHVGVYVCGPTVQSAPHVGHLRSAVAFDLLRRWL--LES 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYV+N+TDIDDKII  A +E        ++  + ++ T+ F      +  L PT Q
Sbjct: 59  GYAVTYVQNVTDIDDKIIVNADRE------GVSVWELATRETRSFDDAYRAVGILPPTIQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+M  LI  ++  G+AYE +  + F      +YG+ S ++ D  +       +
Sbjct: 113 PRATGHIPEMFALIGELMAAGYAYEGDGSVWFRVGRFGDYGALSNQRPDAMQASA--EVE 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W+SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 171 AGKEDPRDFALWKAARPGEPAWDSPWGSGRPGWHLECSAMAGKYLGDVFDIHGGGLDLVF 230

Query: 243 PHHENEIAQSCCA--------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           PHHENE AQ+ CA            + A  W+H G L   G KMSKS GN   + + L  
Sbjct: 231 PHHENERAQTVCASAARAHDGSGEPEMARYWMHVGLLTTGGTKMSKSLGNSFFVTDALAQ 290

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------- 343
            +         V+R  +L  HYR  ++++   L E+     +      +           
Sbjct: 291 VR-------PQVLRYHLLSAHYRSSLEYSPDALAESAAGYGRVETFVRNALDILGSPEEA 343

Query: 344 ------------------KGIIDPAVLSA-------------------LYNDLNTVSAIQ 366
                             +G   P   +A                   L +DL    A+ 
Sbjct: 344 ASLAAEASPAAAPRPAKSRGKGRPQGRAAAGPAGTASPAAAWAAFSAALDDDLGVSRALA 403

Query: 367 ALHKLAREST---------KNHDLLPIFNASAHILGIEVCKE------HLNKNISIAIEK 411
           AL     E           +    L +      +LG++  K+       +   +   +E 
Sbjct: 404 ALFGAVAEGNLVLSKTHRGELAGWLVVVRRMLTVLGLDPVKQWPAAGGQVRAALDGVMEI 463

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +   R        ++ AD IR +L   G I++D       
Sbjct: 464 VRDLRSSARARLDYAEADSIRDRLRDAGIIVDDTGEGQRW 503


>gi|77417496|sp|Q7US70|SYC_RHOBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 537

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 165/536 (30%), Positives = 240/536 (44%), Gaps = 93/536 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  I++YNTL +    F  +    + MY+CGPTVY  +HIG+    ++FD + R L Y  
Sbjct: 17  QPAIRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSG 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VT+V NITD+DDK+I ++++          +S I  + T  ++ +   L      H
Sbjct: 77  YE--VTWVVNITDVDDKLIGKSKER------GIPMSQIAVEMTADYLANLRELGVNQIDH 128

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT+H+PQ+I  I ++   G AY  + ++ FD +  P YG  S R +++Q+ G     
Sbjct: 129 LPRATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVEDQQ-GEGGGA 187

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+
Sbjct: 188 AAKKRNPGDFALWKSARPGEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLM 247

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQS C          W+HNG +     G+   KS+            ++  G
Sbjct: 248 FPHHENERAQSTCCHGA-PMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASG 306

Query: 300 ---------------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
                          RS     IR  +L T YR  I +  + L EA   L  + +     
Sbjct: 307 KISRSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRF 366

Query: 340 --------------TSTSKGIIDPA--------------VLSALYNDLNTVSAIQALHKL 371
                         T  + G  DPA               L+A+ +D NT +AI  L   
Sbjct: 367 AEITGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDA 426

Query: 372 ARESTKNHD--------------------LLPIFNASAHILGIEVC-------KEHLNKN 404
            R   ++ D                       +    + +LG+           E   + 
Sbjct: 427 LRTLNRHIDANQLAAGADAKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEADAEL 486

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +   +  L+  R    + K +++ D IR +L   G  L D K        T W++K
Sbjct: 487 LDSVVHLLINLRKEARERKDYATGDAIRDRLADLGVALLDKK------EGTSWERK 536


>gi|260906618|ref|ZP_05914940.1| cysteinyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 483

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 164/493 (33%), Positives = 236/493 (47%), Gaps = 65/493 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +YNT  R   E + ++  ++ +YVCG TV    HIG+ R   VFD L R L Y   
Sbjct: 1   MTIALYNTASRTTDELRPVNAGHVGIYVCGATVQGEPHIGHLRSASVFDQLRRWLMYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT VRN+TDIDDKI+ ++ +E               K  + F +    L  L P+++
Sbjct: 61  --SVTLVRNVTDIDDKILSKSAEEGRPWF------AHAFKYERAFTQAYAALDVLPPSYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HI +MI LI  +I  G+AY A   + ++ F  +S  +YG  + +++++ +     
Sbjct: 113 PRATGHITEMIELIDRLITAGYAYPALDDSGDVYFAATSWADYGELTNQRLEDMEP-AND 171

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            +   KK+  DF LWK   P EPG   W +PWGRGRPGWHIECSAMS+ YLG+ FDIHGG
Sbjct: 172 ADLRGKKDARDFALWKAHKPGEPGTASWPAPWGRGRPGWHIECSAMSTKYLGENFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A   ++ ANIW+H+G LN+ G KMSKS GN +  +EL     
Sbjct: 232 GLDLRFPHHENELAQSRAA--GDRFANIWMHSGLLNVGGDKMSKSLGNSVFASELF---- 285

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
                +    +R  +    YR  ++F+ + +      L +                    
Sbjct: 286 ---HRYSPLAVRFFLTGASYRSILEFSPEAMDRQTASLDRLANFLQRARQTLGEDAPALP 342

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPI 384
                 ST    +     +AL +DL    A+  +     E  K  D          ++  
Sbjct: 343 EVSDGYSTRGVDVPAEFAAALDDDLGVPRALSVVFATVTEGAKLLDSGQDRSQLTQIVAE 402

Query: 385 FNASAHILGIEVCKEHLNK---------NISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 ILG+    E   K          +   ++ L  +R      K F++AD IR  L
Sbjct: 403 VELMLDILGVNPSAEAWAKSGTNATVETALDSLVDALASQRAAAKAEKDFATADAIRDSL 462

Query: 436 ESKGFILEDYKNP 448
            S G ++ED  + 
Sbjct: 463 ASAGIVIEDTADG 475


>gi|75760638|ref|ZP_00740667.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491881|gb|EAO55068.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 339

 Score =  475 bits (1222), Expect = e-132,   Method: Composition-based stats.
 Identities = 140/341 (41%), Positives = 198/341 (58%), Gaps = 16/341 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYNTL R+  EF  ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y   
Sbjct: 1   MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV N TD+DDK+I+ A +      + + +  I  +  + + +D T L C   T  
Sbjct: 61  D--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAYFEDVTALGCKHATVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S + I + + G R+   
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YLG   DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI +++++       + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
              +IR  ML  HYR PI+F+ + L      L +      +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQXTNNGLERIKTAYGN 325


>gi|15383990|gb|AAK96068.1|AF393466_2 cysteinyl-tRNA synthetase [uncultured crenarchaeote 74A4]
          Length = 462

 Score =  475 bits (1222), Expect = e-131,   Method: Composition-based stats.
 Identities = 181/485 (37%), Positives = 249/485 (51%), Gaps = 59/485 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + +TL     E        I++Y+CG TVYD +HIG+AR +IVFDVL + L     E 
Sbjct: 1   MNLQDTLTTVEQELD--ITKKIKIYLCGVTVYDESHIGHARTIIVFDVLRKYLESKKVE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII RA +E      N     I+SK  + + +D   L     T+ P+
Sbjct: 58  -VDFVQNFTDVDDKIINRATKE------NVTAEEISSKYIENYFRDFEELNVKRATNYPK 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HI  +I  I+ +I    AY   N + F  S    YG  S++KIDE + G+R+     
Sbjct: 111 ATEHIEDIIEFIKKLIDKEIAYVTKNGVYFAVSKFSEYGKLSKKKIDELQSGSRIQIDET 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+PADF +WK S  + P WESPWG+GRPGWHIECS MS  YLG+ FDIHGGG DLIFPH
Sbjct: 171 KKDPADFAVWKFS-DINPTWESPWGKGRPGWHIECSVMSLKYLGENFDIHGGGRDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS     +   A IW+H G + + G KMSKS GN  +I ++LE       +W  
Sbjct: 230 HENEIAQSEACTNL-PFAKIWMHVGMVTISGEKMSKSLGNTKSIKQVLE-------NWGP 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------- 350
            +IRL  L  HY + ID++   L E    L+KW Q  T    +  A              
Sbjct: 282 NIIRLFCLSGHYSKVIDYSEDMLKE---NLTKWRQVETCYFELIHANNKNQENVSENVQK 338

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
                  +L +D NT  A+ A  +L +E+ +              +   F   + ILG+ 
Sbjct: 339 IGIEFDKSLEDDFNTHLALSAFFQLVKETNRLAAAEKLGKENGAIIKKEFKRISAILGLT 398

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
           + +   NK     I++L+  R    + K+F  AD IR +L      L D+K        T
Sbjct: 399 IPEMSQNKI--QEIDELILNREKFREEKQFDKADKIRDELNKMNIELIDHK------ERT 450

Query: 456 RWKQK 460
            W +K
Sbjct: 451 IWMKK 455


>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
          Length = 561

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 176/551 (31%), Positives = 263/551 (47%), Gaps = 116/551 (21%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y   E
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGFE 80

Query: 64  ---------------------------------------KCVTYVRNITDIDDKIIERAR 84
                                                  +   ++  I D+  KII+RA 
Sbjct: 81  IIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIIKRAN 140

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +        +    ++S+   +F +D   L CL PTH+PR T HI Q+I LI  I+ +G 
Sbjct: 141 E------AGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGK 194

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           AY    ++ F   + P+Y S S RK+D+ + GTRV     K+NPADF LWK +   EP W
Sbjct: 195 AYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSW 254

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           ESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFPHHENE+AQS  A    +    
Sbjct: 255 ESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAYPESE-VKC 313

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+HNGF+N +G+KM+K++ NF TI +++         +    +RL ++ THYR  ++ + 
Sbjct: 314 WMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YHPMALRLFLMRTHYRSDVNHSD 366

Query: 325 QRLTEAEILLSKWPQT---------------------STSKGIIDP---AVLSALYNDLN 360
             L  A   L    QT                     +  + +I+      L  + +DL+
Sbjct: 367 TALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLH 426

Query: 361 TVSAIQALHKLARE----------------STKNHDLLPIFNAS-------AHILGI--- 394
           T +A+  L KL ++                  K  D +    A          ILG+   
Sbjct: 427 TTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMPM 486

Query: 395 ----EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               E  K+   K   +  E+L   +++R +  K K F+ +D IR +L + G  L     
Sbjct: 487 SSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALM---- 542

Query: 448 PDNGQRMTRWK 458
                  T W+
Sbjct: 543 --GEPTGTLWR 551


>gi|296274353|ref|YP_003656984.1| cysteinyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296098527|gb|ADG94477.1| cysteinyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 467

 Score =  474 bits (1221), Expect = e-131,   Method: Composition-based stats.
 Identities = 161/481 (33%), Positives = 253/481 (52%), Gaps = 48/481 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           KI IY++++++   F+ I  +  ++YVCGPTVYD +H+G+AR  I FD+L+R+L+     
Sbjct: 3   KIFIYDSVKKEKVLFEPIVENQAKIYVCGPTVYDDSHLGHARSAIAFDMLHRVLKANGLN 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT  +N TDIDDKII++  +         ++  IT++    +  D   L  L  T +P
Sbjct: 63  --VTMTKNFTDIDDKIIKKMNESS------RSLEDITTQYINAYKADMHSLNILDNTLEP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           +AT ++  MI +I ++I    AY  ++ + FD S   +YG+ S+R  DE  +  RV    
Sbjct: 115 KATQNLEAMIEMINDLISKDIAYIIDDGVYFDVSKDNSYGNISKRASDENSI-ARVEVNT 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-----KVFDIHGGGL 238
            K+N +DF LWK     +  +E+ +G+GRPGWHIECSAM   +L         DIHGGG 
Sbjct: 174 QKRNSSDFALWKFEKANDVSYEASFGKGRPGWHIECSAMIQKHLAYKDKDYQIDIHGGGA 233

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ C+   E  A  W+HNGF+ ++G KMSKS GN   + ++L      
Sbjct: 234 DLLFPHHENEAAQTRCSSHKE-LAKYWMHNGFVTIDGEKMSKSLGNSFFLKDIL------ 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDP 349
            +S+   V+R  +L  HYR   +F  + L  ++  L K+ +          S +      
Sbjct: 287 -KSYSGEVVRFYLLTAHYRTDFNFNEEDLISSKKRLDKYYRVKKRVYGSAASAANSEFKA 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            VL+AL +D+N+  AI  +  +   +    D           L+  F     ILGI    
Sbjct: 346 KVLNALNDDINSSKAISIIDDMINNANDKLDKNPKDKNLKKELIANFEFINEILGICFND 405

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  +N++    IE+L+ +R    K K F++AD +R +L + G  + D  N    +
Sbjct: 406 AYEYFQFGINEDTKNKIEELINKRTEAKKQKDFATADSVRDELIALGISVMDTPNGVVWE 465

Query: 453 R 453
           +
Sbjct: 466 K 466


>gi|317056857|ref|YP_004105324.1| cysteinyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315449126|gb|ADU22690.1| cysteinyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 471

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 161/482 (33%), Positives = 235/482 (48%), Gaps = 51/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL  K+ EF   +   + MY CGPTVY +AHIGN R  I+ DVL + +R+   + 
Sbjct: 1   MKIYNTLSHKVEEFVPNEAGKVSMYTCGPTVYHYAHIGNLRSYIMEDVLEKYMRWTGLD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F  D  +L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTVM------EIAKFYTDAFFADCAKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT +I + I +I ++I  G+AYEA   I FDTS +  Y  F     ++ +
Sbjct: 113 NIKTPDVVAPATTYIDEFIKVISSLIEKGYAYEAGGNIYFDTSKLDEYYVFHNFSAEDLE 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  WESPWG G PGWHIECS +S   LG 
Sbjct: 173 VGVREGVEEDTNKRNKADFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSCISMKNLGD 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D IFPHH NEIAQS       K  N W H   LN +  KMSKS G F+T++
Sbjct: 233 KLDIHCGGVDNIFPHHTNEIAQSEAYIG-HKWCNYWFHVHHLNTDTGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------ 343
            L E      + +   V R   L +HYR+ + F+ + L  A+    K      +      
Sbjct: 292 LLEE------KGYDPLVYRFFCLQSHYRKSLVFSWENLDNAKTAYDKLTARIAALLNEKD 345

Query: 344 --------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL--G 393
                   K  +  A  +A+  DLNT + +  ++ + +        L        +L  G
Sbjct: 346 AAPADAAKKDELKAAFAAAMDEDLNTSNGMTVIYDILKSDASAATKLAAIEDIDKVLCVG 405

Query: 394 IEVCKEHLNK-----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           +      LN+     +I   +  LV+ER    K K F+ AD +R ++ + G+ +++ +  
Sbjct: 406 LIAAANKLNEKNSSADIPAEVMALVEERQAARKAKDFAKADELRDKITALGYEVKETRQG 465

Query: 449 DN 450
             
Sbjct: 466 TT 467


>gi|148273671|ref|YP_001223232.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|166200144|sp|A5CTY3|SYC_CLAM3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|147831601|emb|CAN02569.1| cysS1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 484

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 153/492 (31%), Positives = 242/492 (49%), Gaps = 56/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++++  + + +F  +    + +YVCGPTV    HIG+ R  + +D L R L +   
Sbjct: 1   MTLRLHDSRTQSLRDFVPLVDGRVGIYVCGPTVQSAPHIGHLRSALAYDQLRRWLTHRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT VRN+TDIDDK+I+ AR+   +    +    +  +   +F +  + L  L P+++
Sbjct: 61  D--VTLVRNVTDIDDKVIDNARRGQEAGGTEEWW-ALAYRVELEFSRAYSALGILPPSYE 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT  I +M  +I+ ++  GHAY A+    ++ FDT+S P YG  +R++  + +     
Sbjct: 118 PRATASIGEMQEIIRRLVERGHAYAADDRSGDVYFDTASWPEYGELTRQRAADMEAAADA 177

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++  DF LWK + P EP    W SPWG GRPGWHIECSAMS+ YLG  FDIHGG
Sbjct: 178 DPRA-KRDVRDFALWKGAKPGEPASASWPSPWGSGRPGWHIECSAMSTRYLGAEFDIHGG 236

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A   +  A  W+HNG + + G+KMSKS GN +   +LL + +
Sbjct: 237 GLDLRFPHHENELAQSRAA--GDPFARYWLHNGLVAVAGQKMSKSLGNSLFAADLLASAR 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLS--KWPQT 340
                    V+R  +   HYR  ++F                  L  +   L+  ++   
Sbjct: 295 -------PVVVRYFLGSAHYRSTLEFHDGALAEAEAALDRIETFLDRSARRLAGTRFQAA 347

Query: 341 STS----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
             +       +      A+ +DL+   A+  LH   R      D         L    +A
Sbjct: 348 PAAPDGSPAAVPDEFAEAMDDDLSVPQALAVLHDAVRAGNAALDAGDLQEAASLRADVSA 407

Query: 388 SAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
              +LGI+   +           + +   +E  + ER    + + F+ AD IR++L   G
Sbjct: 408 MVAVLGIDPLADEWRTASDQPARRALQALVEHRIAERQTAREARDFALADRIRQELAEAG 467

Query: 440 FILEDYKNPDNG 451
             +ED     + 
Sbjct: 468 ITIEDSPGGSHW 479


>gi|291519016|emb|CBK74237.1| cysteinyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 475

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 156/481 (32%), Positives = 231/481 (48%), Gaps = 39/481 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           MK   K YNT  R++  F+  +   + MY CGPTVY FAHIGN R  I+ D L + L Y 
Sbjct: 1   MKMDFKFYNTATRQVEVFKPNEEGKVSMYTCGPTVYHFAHIGNIRTYIMQDALIKSLEYA 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLAC 116
             +  V  V NITD+     +    E   +      +  +  I    T  F KD   +  
Sbjct: 61  GYQ--VKRVMNITDVGHLSSDADTGEDKMVAGAKREHKTVMEIAKFYTDAFFKDFDAVGN 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKM 175
             P     ATN IP+ I++++ ++  G+AY A   + FDTS + +Y  FS     +  ++
Sbjct: 119 KRPDVVEPATNCIPEFIHMVEVLLEKGYAYVAGGNVYFDTSKLSDYYVFSSSVEKEALEV 178

Query: 176 GTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S  +LG+ 
Sbjct: 179 GVRDDVEEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMKHLGEY 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D IFPHH NE+AQS       K  N W H+  LN +  KMSKS G  +T++ 
Sbjct: 239 MDIHCGGVDNIFPHHTNEVAQSEAYLG-HKWCNYWFHSNHLNDQSGKMSKSKGAILTVSV 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGII 347
           L E      + +   V R   L +HYR+P+ F+   L       +K  +  +   ++G +
Sbjct: 298 LQE------KGYDPLVYRFFCLQSHYRKPLVFSWDNLDNTVTAYNKLVKRVSELKAEGAV 351

Query: 348 DPA--------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV--- 396
           D A           A+ NDLNT  AI  L+   +  T +   L +  +   +L +++   
Sbjct: 352 DEAVKSEFEEKFCEAVSNDLNTSMAITILYDALKADTSDATKLALVESFDKVLSLDLIGH 411

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                     ++  +   I   +  R    K K F++AD IR +L +KG  ++D +    
Sbjct: 412 AKALGEAGSSVDAELEAYINDAIARRAEAKKAKDFATADAIRDELLAKGVEIKDTREGVV 471

Query: 451 G 451
            
Sbjct: 472 W 472


>gi|293375371|ref|ZP_06621652.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645924|gb|EFF63953.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 446

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 166/467 (35%), Positives = 238/467 (50%), Gaps = 51/467 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNT  R+  EF+ I+ + +RMY+CGPTVY++ HIGNARP++ FD+++R  +Y   E 
Sbjct: 1   MLIYNTYTREKEEFRPIEENKVRMYICGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+DDKII RA +E          + I+ K    F++    L  L  T  P+
Sbjct: 60  -VEFVSNVTDVDDKIINRAIEE------GVTEAQISEKYLNYFLECNKALNALPLTAMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  MI  I  ++    AY  + ++ F    +  YG  S +KIDE ++G R+ E   
Sbjct: 113 VTESMDSMIEFINQLVERDFAYAVDGDVYFRIDKVREYGQLSGKKIDELEVGARIAEDSK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK++      W+SPWG GRPGWH EC  M ++      DIHGGG DL FPH
Sbjct: 173 KENPLDFVLWKKTDKG-ITWDSPWGAGRPGWHTECVVMINNQFHGKIDIHGGGTDLQFPH 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C       AN W+H G L L   KMSKS GN I + +L+E          A
Sbjct: 232 HENEIAQSLCMY-EHNIANYWMHVGRLGLNNEKMSKSIGNVINVKDLIE-------QIDA 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIIDPA------- 350
              RL ML  HYR+PI++T + +  A     K   T           G +D         
Sbjct: 284 NAFRLFMLSVHYRQPINYTEENIQLAVKEWQKVKSTYDQLHLKLDLAGALDVEPSVVPEI 343

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHILGI 394
                  + AL +D NT +AI +L+ + +E  K          N   L       +I G 
Sbjct: 344 EALMNQFVEALEDDFNTANAIASLYGVIKEINKMVRAKASDEANRYALMTLQNMTYIFGF 403

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           ++ K    K ++    +L+Q      K K F+ AD +R +L++   +
Sbjct: 404 DLNK----KRLTDEERELMQAWEEARKAKDFAKADELRGKLQALNVL 446


>gi|29840595|ref|NP_829701.1| cysteinyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301685|sp|Q821U7|SYC_CHLCV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|29834945|gb|AAP05579.1| cysteinyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 476

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 161/486 (33%), Positives = 241/486 (49%), Gaps = 52/486 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+K+ +YNT+ R    F       +++Y CGPTVYD+AHIGN R  +  D+L R L   +
Sbjct: 8   KQKLYLYNTVSRAKELF-CSSNDPVKLYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LF 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V ++ NITD+DDK +  A         N ++   T+   Q F +D   L  L    
Sbjct: 65  FGYSVRHIMNITDVDDKTLAGA------CKKNISLDAYTAPYIQAFFEDVASLNILPADV 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            P AT++IPQMI  I  ++  G AY   ++ + F     P YG  S+ K+ + +  +RV 
Sbjct: 119 YPHATHYIPQMIEAIAKLLDEGIAYVGQDSSVYFSIEKFPTYGKLSQLKLQDLQCCSRVS 178

Query: 181 -EKYHKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K+N +DF+LWK           WESP+G+GRPGWH+ECS M+   LG   DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYEEKRDGHIYWESPFGKGRPGWHLECSIMAMELLGASIDIHAG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+   
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------- 349
              R +    IR  +L +HYR  ++FT + L      L +     +    + P       
Sbjct: 295 ---RGFSGEEIRYMLLQSHYRMQLNFTEEGLLACRQALKRLRDFISRIESVYPESSHISE 351

Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
                      A   A+ NDLN  +A+ AL     ++    D           +L I   
Sbjct: 352 DMQQHGEGFLQAFSEAIANDLNIAAALAALFDFIHQTNSTIDQANFTQADANYVLDIMKR 411

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LG+      L   I   +++LV+ER +    K +  AD +R Q+ S G+ +ED K+
Sbjct: 412 INTVLGVIPFSADLE--IPDHVKQLVEEREVARSEKNWKQADALRDQVASLGYSIEDAKS 469

Query: 448 PDNGQR 453
               ++
Sbjct: 470 GPKVKK 475


>gi|327540430|gb|EGF27015.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 539

 Score =  473 bits (1219), Expect = e-131,   Method: Composition-based stats.
 Identities = 165/536 (30%), Positives = 240/536 (44%), Gaps = 93/536 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  I++YNTL +    F  +    + MY+CGPTVY  +HIG+    ++FD + R L Y  
Sbjct: 19  QPAIRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSG 78

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VT+V NITD+DDK+I ++++          +S I  + T  ++ +   L      H
Sbjct: 79  YE--VTWVVNITDVDDKLIGKSKER------GIPMSQIAVEMTADYLANLRELGVNQIDH 130

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            PRAT+H+PQ+I  I ++   G AY  + ++ FD +  P YG  S R +++Q+ G     
Sbjct: 131 LPRATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVEDQQ-GEGGGA 189

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS   LG+ FDIHGGGLDL+
Sbjct: 190 AAKKRNPGDFALWKSARPDEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLM 249

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGG 299
           FPHHENE AQS C          W+HNG +     G+   KS+            ++  G
Sbjct: 250 FPHHENERAQSTCCHGA-PMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASG 308

Query: 300 ---------------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
                          RS     IR  +L T YR  I +  + L EA   L  + +     
Sbjct: 309 KISRSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRF 368

Query: 340 --------------TSTSKGIIDPA--------------VLSALYNDLNTVSAIQALHKL 371
                         T  + G  DPA               L+A+ +D NT +AI  L   
Sbjct: 369 AEITGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDA 428

Query: 372 ARESTKNHD--------------------LLPIFNASAHILGIEVC-------KEHLNKN 404
            R   ++ D                       +    + +LG+           E   + 
Sbjct: 429 LRTLNRHIDANQLVAGADAKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEADAEL 488

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +   +  L+  R    + K +++ D IR +L   G  L D K        T W++K
Sbjct: 489 LDSVVHLLINLRKEARERKDYATGDAIRDRLADLGVALLDKK------EGTSWERK 538


>gi|302671187|ref|YP_003831147.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
 gi|302395660|gb|ADL34565.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
          Length = 474

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 159/481 (33%), Positives = 233/481 (48%), Gaps = 38/481 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M  K   YNTL RKI EF   +   + MY CGPTVY FAHIGN R  I+ DVL + L   
Sbjct: 1   MSHKFTFYNTLSRKIEEFNPREEGKVSMYTCGPTVYHFAHIGNIRTYIMQDVLIKAL--G 58

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLAC 116
           Y    V  V NITD+     +    E   +      +  +  I    T  F KD   +  
Sbjct: 59  YAGYDVKRVMNITDVGHLSSDADTGEDKMLAGAKREHKTVMEIAKFYTDAFFKDFDAVGN 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKM 175
             P     ATN IP+ I++++ ++  G+AY A   + FDTS + +Y  FS     ++ ++
Sbjct: 119 KRPDVVEPATNCIPEFIHMVEVLLEKGYAYVAGGNVYFDTSKLQDYYVFSSEVEKEQLQV 178

Query: 176 GTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S  +LG+ 
Sbjct: 179 GVRDDVEEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMKHLGEY 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D IFPHH NEIAQS      E     W H+  LN +  KMSKS G  +T++ 
Sbjct: 239 IDIHCGGVDNIFPHHTNEIAQSESYLGHE-WCKYWFHSNHLNDKSGKMSKSKGAVLTVSV 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
           L E      + +   V R   L +HYR+P++F+ + L +A    +K  +           
Sbjct: 298 LQE------KGYDPLVYRFFCLQSHYRKPLEFSYEALDQAAQAFNKLVKRVSELKEDGAV 351

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC-- 397
            + +K   +     A+ NDLNT  AI  L+ + +    +   L +  +   +L +++   
Sbjct: 352 DTAAKEKFEENFRDAVSNDLNTSMAITVLYDVLKADINDATKLALVESFDKVLSLDLLGH 411

Query: 398 ------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                    ++  +   I   ++ R    K K F++AD IR +L  KG  ++D +     
Sbjct: 412 AKAVSEGPSVDPELEKFILDAIERRANAKKAKDFATADAIRAELLEKGVEIKDTREGVKW 471

Query: 452 Q 452
           Q
Sbjct: 472 Q 472


>gi|145596731|ref|YP_001161028.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|145306068|gb|ABP56650.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 471

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 169/486 (34%), Positives = 243/486 (50%), Gaps = 53/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T    + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L  +  
Sbjct: 1   MTLRLYDTATHSVRDFVPREAGKVGIYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAHGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V ++RN+TDIDDKI+ +A      + ++     I   N  +       L  L PT++
Sbjct: 61  E--VRFIRNLTDIDDKILVKA------VELDLPYWSIAYANELKLTAAYRALNVLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+M  LI  +I  GHAY A   + ++ FD  S P YG+ S +   + +     
Sbjct: 113 PRATGHIPEMQQLIAELIDAGHAYPATDGSGDVYFDVHSWPAYGALSNQSPGDMQPAGDA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           P++  K++P DF LWK + P EP    W SPWGRGRPGWHIECSAM   YLG  FDIHGG
Sbjct: 173 PDRC-KRDPRDFALWKGAKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGSEFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A      A  W+H+G LN+ G KM KS GN +   +L     
Sbjct: 232 GLDLTFPHHENELAQSQAA--GLPFARYWVHHGLLNIGGAKMGKSCGNTL---DLTYVDS 286

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGII 347
            G R      +R      HYR  ID++   L EA +   +             +   G++
Sbjct: 287 LGVR---PVELRYYYTAAHYRSVIDYSEDALREAAVAYRRIEGFVQRSTERVGAGQPGVV 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
             A  +A+ +DLNT +A+  LH+  R+                L    A   ILG++   
Sbjct: 344 PAAFAAAMDDDLNTSAALAVLHETVRDGNTALTGGDDVTVRTALGQVRAMLDILGVDPLD 403

Query: 399 EHLN-----KNISIAIEKLVQ----ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
              +      ++   ++ LVQ    +R      K +S+AD IR QL+  G ++ED     
Sbjct: 404 PAWSAGGGTDDLGAVVDSLVQLALEQRAQARSRKDWSAADAIRDQLKQAGVVVEDTP--- 460

Query: 450 NGQRMT 455
            G R T
Sbjct: 461 QGPRWT 466


>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 170/496 (34%), Positives = 245/496 (49%), Gaps = 64/496 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++ +YNT+ +    F+ I+P  I MYVCG T YD++HIG+AR  + FD+LYR LR+  
Sbjct: 5   KPELTLYNTMTQLKEVFKPINPGKIGMYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLG 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TD+DDK  +            +    ++++  ++++ D T L CL PT 
Sbjct: 65  YE--VHYVRNFTDVDDKAKKC----------GEKPLDLSNRFCEEYLLDMTALQCLIPTR 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR ++H+  +I +I+ II +G  Y    ++ F     P+YG  S +++D  + G RV  
Sbjct: 113 QPRVSDHMEHIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAV 172

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LW  +   EP WESPWG GRPGWHIECSAMS+HYL   FDIHGGG DL 
Sbjct: 173 DSRKRNPADFALWNAAKSGEPSWESPWGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLK 232

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG +     KM KS  NF TI E+          
Sbjct: 233 FPHHENEIAQTCAA-CEDSGVNYWLHNGHVTNNNVKMGKSLDNFFTIREITA-------K 284

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN- 360
           +    +R  ++   YR P++++V +L  +   L    QT              +  D+  
Sbjct: 285 YHPLALRHFLMSAQYRSPLNYSVSQLESSSDALYCAYQTLEDLVKYLSPYREEMSGDVGK 344

Query: 361 ---TVSA-----------------IQALHKLARESTKNH-----DLLPIFNASAHILGI- 394
              T  A                 I  L K+ ++   +      ++         +LG+ 
Sbjct: 345 TQQTAEAKEMIKKVKNALKFINVSISKLKKIQKKQRMSLIVSLVEVEKAVREVLDVLGLL 404

Query: 395 ------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                 E  KE   K +         + + + ER +  K K F  +D IR+ L +KG  L
Sbjct: 405 TTLSYDEFLKEMKQKALTRAGIGEEEVLRRIDERKLARKNKDFKRSDQIRELLAAKGIAL 464

Query: 443 EDYKNPDNGQRMTRWK 458
           ED    D     T W+
Sbjct: 465 EDIPGKD-----TVWR 475


>gi|193084115|gb|ACF09782.1| cysteinyl-tRNA synthetase [uncultured marine crenarchaeote
           KM3-153-F8]
          Length = 469

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 159/476 (33%), Positives = 224/476 (47%), Gaps = 46/476 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K +NTL RK   F+     N+ +Y CGPTVYD+AHIGN R  +  D+L R L Y   +
Sbjct: 3   SLKFFNTLGRKKESFKHDKNKNVLIYCCGPTVYDYAHIGNFRTFLFEDILIRYLEYKGYK 62

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             + +V NITDIDDK I+ + +       N  +   T K    F +D  +L        P
Sbjct: 63  --IKFVMNITDIDDKTIKASSEN------NVPLKEYTKKYEDAFFEDIKKLRIRKAESYP 114

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR-RKIDEQKMGTRVPEK 182
           RAT HI  ++  I+ +     AYE+N  I F  S    YG+ S  +  +         ++
Sbjct: 115 RATEHIDNIVTHIKKLKELEFAYESNGSIYFSISKFKKYGTLSGEKNKNINNKKPINSDE 174

Query: 183 YHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           Y K    DF LWK          W++  G+GRPGWHIECS MS+  L    DIH GG+DL
Sbjct: 175 YSKNEIQDFALWKAWVQDDNNVFWDNELGKGRPGWHIECSVMSTKLLNDSIDIHAGGVDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHENEIAQ+      +     W+H   L +EG+KMSKS GNF T+ +LL+       
Sbjct: 235 IFPHHENEIAQAEALTNNK-FVRYWLHAEHLIVEGKKMSKSEGNFFTLRDLLK------E 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPA---- 350
            +    IRL ++ +HYR  ++FT+  L +A   + +  +       S +K   D      
Sbjct: 288 GYEPLTIRLLLISSHYRSQLNFTINGLKQASENIKRLQEIYTKVKLSKTKNGYDEELFKH 347

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHIL 392
                     A+ +D N   A+  +    R   K  D           +L  F     IL
Sbjct: 348 TKTSKEKFERAMDDDFNMPVALSVIFNYVRIINKYIDNTELTEMNKQEILDFFVKIDQIL 407

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            +   KE         IE+L++ R    + K +  AD IRK+L   GFI+ED  N 
Sbjct: 408 DVVNTKEKDQIFPEPRIEELIRRRNEARERKDWKKADEIRKELLKSGFIIEDTSNG 463


>gi|317126032|ref|YP_004100144.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315590120|gb|ADU49417.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 492

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 145/496 (29%), Positives = 229/496 (46%), Gaps = 59/496 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +++T  R++  F   +   + MY+CG T     HIG+ R  + FDVL R L   + 
Sbjct: 1   MSLHLFDTATRELRAFVPRESGKVGMYICGLTTQGAPHIGHIRFAVAFDVLRRWLETAH- 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT +RN+TDIDDK++ +A          +    +T +N +        L     T++
Sbjct: 60  DYHVTLIRNVTDIDDKVLRKAAD------AGEDWFALTYRNERLTTDALDALGVKPATYE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT H+P M+ L++ +I  GHAY   + + ++ FD  S P+YGS S + +D+       
Sbjct: 114 PRATGHVPDMVALMETLIEKGHAYAAPDGSGDVYFDVRSWPDYGSLSNQSLDDMVAAEDA 173

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P DF LWK     EP    W +P+G GRPGWH+ECSAM+  +LG  FDIHGG
Sbjct: 174 DPR-GKRDPRDFALWKGRKSDEPLSASWPTPFGSGRPGWHLECSAMARRWLGDEFDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHHENE AQS  A      A  W+HN ++ ++G KM KS GN + +  LLE  +
Sbjct: 233 GIDLRFPHHENEQAQSRAAGLG--FARYWLHNAWVTVKGEKMGKSLGNALEVRHLLEHTR 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------QT 340
                    V+R  +   HYR  I++    L EA   + +                    
Sbjct: 291 -------PLVLRYYLTAAHYRSTIEYHSGSLDEAAAAVERIEGFLERAARRGEITSPTDA 343

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHI 391
           + ++ ++ P  + A+ +DL    A+ A+H   R      +               A   +
Sbjct: 344 AAARAVLPPEFVEAMDDDLGVSGALAAVHDTVRAGNVALEEGDDDAALAAAVRVVAMTDV 403

Query: 392 LGIEVCKEHL-----------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           LGI     +               +   +   ++ER    + + F+ AD IR +L + G 
Sbjct: 404 LGINPLAPNWATSQDATTTAVEVALDALVRARLEERQSARQERDFARADAIRDELAAVGV 463

Query: 441 ILEDYKNPDNGQRMTR 456
            + D         +  
Sbjct: 464 AITDTPAGAQWALVRT 479


>gi|269103035|ref|ZP_06155732.1| cysteinyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162933|gb|EEZ41429.1| cysteinyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 410

 Score =  473 bits (1218), Expect = e-131,   Method: Composition-based stats.
 Identities = 155/432 (35%), Positives = 223/432 (51%), Gaps = 46/432 (10%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           + R LRY   +  +T+VRNITDIDDKII+RA +        +    +T +   +   D  
Sbjct: 1   MSRYLRYLGYD--LTFVRNITDIDDKIIKRAAEN------GETCDSLTERLIGEMHADFD 52

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKID 171
            L    P  +PRAT  I ++I L + +I  G AY A+  +++F+ S   +YG  S++ +D
Sbjct: 53  ALGMKRPDVEPRATAFISEIIALCERLIERGFAYVADNGDVMFEVSKFKDYGRLSKQDLD 112

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           + + G RV  +  K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  F
Sbjct: 113 QLQAGARVDIELAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHF 172

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG DL FPHHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF TI ++
Sbjct: 173 DIHGGGSDLQFPHHENEIAQSCCAHDT-QYVNTWMHSGMVMVDREKMSKSLGNFFTIRDV 231

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------ST 342
           L         +    +R  ++  HYR  ++++   L +A   L +   +         + 
Sbjct: 232 LN-------HYDPETVRYFLMSGHYRSQLNYSEDNLKQARSALERLYTSLRGLDTSVEAA 284

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI 394
                      A+ +D NT  A   L  +ARE  +           L       A +LG+
Sbjct: 285 GGEEFVARFKEAMDDDFNTPEAYSVLFDMAREINRLKTDDMAAASVLGARMRELADVLGL 344

Query: 395 E------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                    +   N +    IE L+Q+RL     K +++AD  R +L   G ILED    
Sbjct: 345 LGQEPEVFLQSGANDDDVAEIEALIQQRLDARAAKDWAAADQARDKLTEMGIILED---- 400

Query: 449 DNGQRMTRWKQK 460
             G + T W++K
Sbjct: 401 --GPQGTTWRRK 410


>gi|50955382|ref|YP_062670.1| cysteinyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|61216187|sp|Q6ADI1|SYC_LEIXX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50951864|gb|AAT89565.1| cysteinyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 477

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 164/486 (33%), Positives = 236/486 (48%), Gaps = 50/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T    + +F  +    + MYVCGPTV    HIG+ R  +V+D L R L Y   
Sbjct: 1   MTLRLFDTKAGALRDFVPLRSGEVGMYVCGPTVQASPHIGHLRSALVYDQLRRWLTYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT VRN+TDIDDK++        +   ++    +  +  ++F   +  L   APT++
Sbjct: 61  --AVTLVRNVTDIDDKVLAN-AAAAQAEGGSEQWWALAYRFEREFTAASVALGVQAPTYE 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT  IPQM  +IQ +I  GHAY A     ++ FD  S P YG  +R+  D  +     
Sbjct: 118 PRATASIPQMQEIIQRLIERGHAYAAGDGSGDVYFDVRSWPAYGELTRQSADSMEAAADA 177

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++  DF LWK     EP    + SPWG GRPGWHIECSAMS  YLG  FDIHGG
Sbjct: 178 DPRA-KRDGRDFALWKGRKADEPDSAAFPSPWGEGRPGWHIECSAMSRRYLGPRFDIHGG 236

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A   +  AN W+HNG +N+ G+KMSKS GN ++  ELL   +
Sbjct: 237 GLDLRFPHHENELAQSAAA--GDSFANYWVHNGLVNVNGQKMSKSLGNSVSAAELLGAAR 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------TST 342
                     +R ++   HYR  ID+    L+EAE  L +                 T +
Sbjct: 295 -------PLAVRYSLGSAHYRSTIDYHDGSLSEAEAALERIAGFFERVDRRLAGTRFTGS 347

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILG 393
              ++  A   A+ +DL    A+  LH+  R      D               A   +LG
Sbjct: 348 GSEVVPIAFAEAMDDDLAVPQALAVLHETVRSGNAALDAEDLEAAAAARGQVFAMTEVLG 407

Query: 394 IEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           I                + +   +E+L+  R    +++ F +AD IR++L   G  +ED 
Sbjct: 408 INPLSPQWRQTGSSAAEQALGTLVERLLHNRQEARQVRDFVAADRIREELTGAGITIEDT 467

Query: 446 KNPDNG 451
               + 
Sbjct: 468 PTGCHW 473


>gi|46446869|ref|YP_008234.1| cysteinyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|61216206|sp|Q6MBU0|SYC_PARUW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|46400510|emb|CAF23959.1| putative cysteinyl tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 478

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 154/491 (31%), Positives = 250/491 (50%), Gaps = 56/491 (11%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++YNT ER+  E + I  ++I++Y CGPTVY +AHIGN R  I  D+L R ++++   
Sbjct: 10  PLRLYNTAERQKQELKPIKGNHIQLYTCGPTVYHYAHIGNFRTYIFEDLLRRTIQFFGF- 68

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             +T V N+TD+DDK I  A      I     +   T      F +D   L   +  + P
Sbjct: 69  -SITQVMNLTDVDDKTIRGA------IAKGITLDEYTKPYKDAFFEDLKTLNIQSAEYYP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
            AT++IP MI +I+ ++    AY+  +  I +  +  P YG  S   +++ + G      
Sbjct: 122 AATDYIPAMIEMIKVLLDKKVAYKGGDGSIYYAINQFPRYGCLSHLHLEDLQAGASERVA 181

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K++ ADF+LWK        +  WESP+G GRPGWH+ECSAM+ H LG+  DIH G
Sbjct: 182 ADEYEKEHVADFVLWKSYDSERDGQIYWESPFGLGRPGWHLECSAMAMHLLGETIDIHVG 241

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D +FPHHENEIAQS      +K  N+W+H   L ++ +KMSKS GNF T+ +LL    
Sbjct: 242 GIDNMFPHHENEIAQSEACSG-KKFVNLWMHAEHLVVDQKKMSKSLGNFYTLRDLLN--- 297

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGII 347
              + +    +R  +L THY+  ++FT Q +   +  L +           QT  S G +
Sbjct: 298 ---KGFTGIQVRYLLLQTHYKTQLNFTFQGVESVKSSLQRLNDFIQRIYNIQTLQSDGQV 354

Query: 348 D-------PAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
           D            AL +DLN  SA+ A+    RE             +   ++ +     
Sbjct: 355 DLLVNDALIRFAEALADDLNISSALAAIFDFVREINCLCDVNQVSQKEAETVINLMKKFD 414

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            ILG+    +   ++I + +++   +R    + K ++ +D +R  +  +G+++ED     
Sbjct: 415 TILGVLTFDKR-EESIPVDLQEAFAKRQQARQEKNWTLSDELRDFIHQRGYLIEDT---- 469

Query: 450 NGQRMTRWKQK 460
              + TR K++
Sbjct: 470 --PQGTRLKKQ 478


>gi|170783050|ref|YP_001711384.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|189082062|sp|B0RAX1|SYC_CLAMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|169157620|emb|CAQ02818.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 484

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 155/492 (31%), Positives = 241/492 (48%), Gaps = 56/492 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++++  + + +F  +    + +YVCGPTV    HIG+ R  + +D L R L Y   
Sbjct: 1   MTLRLHDSRTQSLRDFVPLVDGRVGIYVCGPTVQSAPHIGHLRSALAYDQLRRWLAYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT VRN+TDIDDK+I+ AR+   +    +    +  +   +F +    L  L P+++
Sbjct: 61  D--VTLVRNVTDIDDKVIDNARRGQEAGGTEEWW-ALAYRVELEFSRAYAALGILPPSYE 117

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT  I +M  +I  ++  GHAY A+    ++ FDT+S P YG  +R++  + +     
Sbjct: 118 PRATASIGEMQAIIGRLVERGHAYPADDGSGDVYFDTASWPEYGELTRQRAADMEAAADA 177

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++  DF LWK + P EP    W SPWG GRPGWHIECSAMS+ YLG  FDIHGG
Sbjct: 178 DPRA-KRDVRDFALWKGAKPGEPASASWPSPWGAGRPGWHIECSAMSTRYLGAEFDIHGG 236

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A   +  A  W+HNG + + G+KMSKS GN +   +LL + +
Sbjct: 237 GLDLRFPHHENELAQSRAA--GDPFARYWLHNGLVAVAGQKMSKSLGNSLFAADLLASAR 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLS--KWP-- 338
                    V+R  +   HYR  ++F                  L  +   L+  ++   
Sbjct: 295 -------PVVVRYFLGSAHYRSTLEFHDGALAEAEAALDRIETFLDRSARRLAGTRFQAE 347

Query: 339 --QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
              T  +   +      A+ +DL+   A+  LH   R      D         L    +A
Sbjct: 348 PAATDGAPAAVPDEFAEAMDDDLSVPQALAVLHDAVRAGNAALDAGDLQEAASLRADVSA 407

Query: 388 SAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
              +LGI+   +           + +   +E  + ER    + + F+ AD IR++L   G
Sbjct: 408 MVAVLGIDPLADEWRTASDQPARRALQALVEHRIAERQTAREARDFALADRIRQELAEAG 467

Query: 440 FILEDYKNPDNG 451
             +ED     + 
Sbjct: 468 ITIEDSPGGSHW 479


>gi|330470432|ref|YP_004408175.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328813403|gb|AEB47575.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 471

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 168/486 (34%), Positives = 239/486 (49%), Gaps = 53/486 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + +F   +   + +Y+CG T+    HIG+ R  + +DVL R L     
Sbjct: 1   MTLRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAAGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT++RN+TDIDDKI+ +A+++            I   N  +  +    L  L PT++
Sbjct: 61  E--VTFIRNVTDIDDKILIKAQEQ------ERPFWSIAYANELKLAEAYRALNVLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT HIP+M  LI  +I  GHAY A   + ++ FD  S P YG+ S +  DE +     
Sbjct: 113 PRATGHIPEMHQLIAQLIERGHAYPATDDSGDVYFDVRSWPAYGALSNQSPDEMQSAADA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           PE+  K++P DF LWK   P EP    W SPWG GRPGWHIECSAM   YLG  FDIHGG
Sbjct: 173 PER-GKRDPRDFALWKGVKPGEPADAYWPSPWGLGRPGWHIECSAMCWRYLGAEFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDLIFPHHENE+AQS  AD     A  W+H+G L + G KM KS GN       L+   
Sbjct: 232 GLDLIFPHHENELAQSQAADL--PFARYWVHHGLLGIGGTKMGKSLGN------ALDLAY 283

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGII 347
             G       +R   +  HYR  ID++ + L EA +   +                 G +
Sbjct: 284 VAGLGVRPVELRYYYVAAHYRSRIDYSEEALREAAVAYRRIEGFVQRSVERVGVGQLGEV 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
             A  +A+ +DLNT +A+  LH + R+                L    A   ILG++   
Sbjct: 344 PAAFAAAMDDDLNTSAALAVLHDVLRDGNNALAGGDDVTVRTALASVRAMLDILGVDPLD 403

Query: 399 EHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                          +   +   +++R      K +++AD +R QL+  G ++ED     
Sbjct: 404 PAWTGGARASDLRGVVDSLVALALEQRAQARVRKDWAAADALRDQLKRAGVVVEDTP--- 460

Query: 450 NGQRMT 455
            G R T
Sbjct: 461 QGPRWT 466


>gi|260891413|ref|ZP_05902676.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858796|gb|EEX73296.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 355

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 219/343 (63%), Gaps = 16/343 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT+  KI EF+ I+ + ++MYVCGPTVY++ H+GNARP++VFD L R   +   + 
Sbjct: 1   MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKGMK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII ++ +E        + S ++ K  + F +D ++L  L    +P+
Sbjct: 60  -VEFVQNFTDVDDKIINKSMEE------GTSASEVSEKYIKYFFEDISKLNILESVKRPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++I +IQ +I +G AYE + ++ F+     +YG  S +KI+E ++G R+     
Sbjct: 113 VTENMAEIIEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEI 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+    EP WESPWG+GRPGWHIECSAM+  YLG  FDIHGGG DL+FPH
Sbjct: 173 KKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS CA      AN W+HNGF+ + G KMSKS GNF  + E+LE        +  
Sbjct: 233 HENEIAQSKCAYHGN-FANYWLHNGFIQINGDKMSKSLGNFFLLREILE-------KFSG 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
            V+RL +L THYR+PI+F+ + + + +  L    ++      I
Sbjct: 285 NVVRLFILSTHYRKPINFSFENIEDTKKALQNIVKSMNKFEDI 327


>gi|325962199|ref|YP_004240105.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323468286|gb|ADX71971.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 488

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 163/496 (32%), Positives = 233/496 (46%), Gaps = 58/496 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T   ++  F  +      +Y CG TV    H+G+ R  I FD L R L +   
Sbjct: 1   MTLRFYDTASAEVRNFVPLVEGKASLYYCGATVQGMPHVGHIRSAIAFDQLTRWLAFRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              VT VRN+TDIDDKI+ ++        Q        +    +  +  ++F+K    L 
Sbjct: 61  --RVTVVRNVTDIDDKILAKSEASFAPGFQPEAGEVPEEEWWALAYRYEREFLKAYDILG 118

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDE 172
              PT++PRAT HIP+M  LIQ +I  GHAY A   + ++ FD  S   YG+ +R+ ID+
Sbjct: 119 VSRPTYEPRATGHIPEMHALIQQLIDRGHAYPALDDSGDVYFDVRSWSKYGALTRQNIDD 178

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
            +       +  KK+P DF LWK S   EP    W SPWG GRPGWH+ECSAM + YLG 
Sbjct: 179 MQAAPDADPR-GKKDPRDFALWKGSKEGEPTTASWASPWGAGRPGWHLECSAMVTKYLGT 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  EG KMSKS GN I+  
Sbjct: 238 EFDIHGGGLDLRFPHHENEMAQSQAA--GHPFANFWMHNGMVTYEGEKMSKSIGNTISPA 295

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------PQTS 341
           E+LE            V+R  +   HYR  +D+    L EA   + +          +  
Sbjct: 296 EMLELA-------SPRVVRYYLGQAHYRSVLDYRPTSLQEAAAAVERIDGFLAKAAARFG 348

Query: 342 TSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LL 382
             +G +D           A   A+ +DLN   A+ ALH+  R                 L
Sbjct: 349 KEQGSVDGGSGPSSNAMEAFSEAMDDDLNVPRALAALHETVRAGNTALAEGNDDDARLAL 408

Query: 383 PIFNASAHILGIEVC------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
                   +LG++               + + ++  +  R      K ++++D IR+ L 
Sbjct: 409 DTVRVMTDVLGLDAVAGIDAGSGKEAAALDVLVQAQLAARAAARAQKDWAASDAIRETLA 468

Query: 437 SKGFILEDYKNPDNGQ 452
             G ++ED  +     
Sbjct: 469 HAGIVVEDGPDGATWT 484


>gi|6318288|gb|AAF06821.1|AF065890_2 cysteinyl-tRNA synthetase [Thermoproteus tenax Kra 1]
          Length = 484

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 163/474 (34%), Positives = 244/474 (51%), Gaps = 44/474 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++IYNT  +++  F  + P   R YVCG T YD  H+G+ R  + FD+L R L +   E
Sbjct: 5   PLRIYNTASKRVEPFSVLTPGVARGYVCGITPYDSVHVGHGRVYVFFDILRRYLEHLGLE 64

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V N TD+DDKII RAR+E  +  ++     +  +  +++     RL        P
Sbjct: 65  --VKLVINFTDVDDKIINRAREEFGADAVSR-WREVPERYIREYFDVMERLYVKPAYAYP 121

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T ++  M+  I+ ++  G+AY A +  + F+   +P YG FS ++I+E   G RV  +
Sbjct: 122 RVTEYVGDMLEWIRALVDRGYAYVAPDGSVYFEVGKVPRYGEFSGQRIEELVAGARVEPE 181

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK  +P EP W SPW  GRPGWH+EC  MS+ +LG  FD HGGG DLIF
Sbjct: 182 PGKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIF 241

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIA +     ++  A  WIH G+L + G KMSKS GN IT+ E+L         +
Sbjct: 242 PHHENEIAIARAMHGVDYFARYWIHVGYLTVGGEKMSKSLGNIITLKEVLS-------KY 294

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTSKGIIDPA----- 350
               +RLA  M+HYR+P++F+   L  A  LL        +  Q     G  D A     
Sbjct: 295 DGEALRLAYAMSHYRKPMEFSYDLLDRAVELLGTMYTAYDELSQAVADAGERDVAPLAEE 354

Query: 351 -------VLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFN---ASAH 390
                     AL +D++T  A +AL+ +AR          +       L I       A 
Sbjct: 355 ASSYRRKFEEALADDMSTNEAARALYDMARFIISKVLYSVDKISRETALGILRDYAEMAD 414

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LG+   +E + + ++ A+  +V+ R  L   ++++ AD +R +  + G  + D
Sbjct: 415 VLGLLNKRE-VPRELAEAVRAIVEARSRLRSERQYALADMLRDRARALGVEMHD 467


>gi|223982635|ref|ZP_03632869.1| hypothetical protein HOLDEFILI_00143 [Holdemania filiformis DSM
           12042]
 gi|223965415|gb|EEF69693.1| hypothetical protein HOLDEFILI_00143 [Holdemania filiformis DSM
           12042]
          Length = 478

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 158/464 (34%), Positives = 235/464 (50%), Gaps = 47/464 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL  KI EF+ + P+ + MYVCGPTVY+ AHIGNARP+IVFD L RL      
Sbjct: 35  MSIRLYNTLSGKIEEFKPMKPNEVSMYVCGPTVYNHAHIGNARPIIVFDTLRRLFEAQGY 94

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV N TD+DDKII++A +E      N A  +++++  + + K    L        
Sbjct: 95  --TVKYVSNYTDVDDKIIKKAHEE------NVAEGVVSARYIEAYQKVRDSLNTEPLFAT 146

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T  + ++I+ I  ++  GHAY+   ++ F   S+P+YGSFS++ +++ ++G R+ E 
Sbjct: 147 PRVTETMDEIIHFIDELVKTGHAYQVGGDVYFRVGSVPSYGSFSKQNLEDLQVGARIEEN 206

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+NP DF LWK  T M   W+SPWG GRPGWH EC  M     G   DIHGGG+DL F
Sbjct: 207 TKKENPLDFALWKE-TDMGIKWQSPWGEGRPGWHTECVVMIHKEFGDQIDIHGGGMDLRF 265

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS         A+ W+HN  +N+ G KMSKS GN     +++E         
Sbjct: 266 PHHENEVAQSQALFHNS-IAHYWLHNAMININGEKMSKSLGNVSWAKDVIEKLG------ 318

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------QTSTSKGII 347
            A ++R  ML  HYR  ++F+ + +  A   L K                   +      
Sbjct: 319 -ADLVRWLMLSVHYRGELNFSDETIETARKELDKVRTPMKQAYIKSQLANVTVTGCDEDA 377

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEV 396
               + A+ +DLNT +    +++  ++  +      I                 +LGI +
Sbjct: 378 VKRFIDAMNDDLNTPNGYAEIYETVKKLNQALRQREIQWDQVGAEVGALEKMLEVLGIRL 437

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
            K  L+++     +++  E       K F+ AD  R  L  +G 
Sbjct: 438 PKVTLSEDD----KQVFAEWNAAKAAKDFAQADVKRAILIERGL 477


>gi|20089634|ref|NP_615709.1| cysteinyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|24418697|sp|Q8TSP6|SYC_METAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19914556|gb|AAM04189.1| cysteinyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 473

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 159/486 (32%), Positives = 236/486 (48%), Gaps = 55/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   F+ +    I +Y CGPTVY+  HIGN R  ++ D + R L Y     
Sbjct: 2   LQVYNTLTREKEIFKPVKEGEISIYACGPTVYNMPHIGNYRTFLMTDNVLRALEYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V NITDIDDK I  ++           +   T K T +F K    L        PR
Sbjct: 60  RVKLVMNITDIDDKTIRDSKA------AGMTLKDFTDKYTAEFFKGLDMLNIKRAFAYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           AT ++  MI L + +I  G AYE +  + +  S  P YG  SR   D   +G  V  ++Y
Sbjct: 114 ATENVDGMIELARKLIEKGLAYEKDGSVYYRISGFPEYGKLSRLNFDNILIGASVDVDEY 173

Query: 184 HKKNPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L K STP E      ++SPWG+ RPGWHIECS M+ +  G   DIH GG+D
Sbjct: 174 DKDNPRDFALLKASTPEEIERGIYYDSPWGKIRPGWHIECSVMAMNSFGPTLDIHTGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIAQS  A   +     WIH   L +EG KMSKS  N  T+ E++E      
Sbjct: 234 LIFPHHENEIAQSEGATG-KPFVCTWIHGEHLIVEGEKMSKSKRNVFTLPEIVE------ 286

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
             +   V+R   L  HYR+ +D++      A+    +  +T  +                
Sbjct: 287 -KYGGEVVRFMFLSVHYRKKLDYSEAFAENAKNNYLRLKETLDNLEFSLKGADDKSYPGD 345

Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLP----IFNA 387
                    ++     AL +D NT  A+    +L+R +       KN  +L     ++  
Sbjct: 346 LETLKALPELETQFRHALEDDFNTPRALTVFRELSRTANLYLEAGKNRKVLEKVHTLYRK 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            + +LG+    +   + I   + +LV+ER    K K + ++D +R+++ + G+I++D K 
Sbjct: 406 FSDVLGL--FAQAGKEEIPEEVFRLVEEREAARKKKDWGTSDTLREKIRTLGYIIQDKKE 463

Query: 448 PDNGQR 453
             N ++
Sbjct: 464 GPNVKK 469


>gi|301630357|ref|XP_002944288.1| PREDICTED: cysteinyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 433

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 166/452 (36%), Positives = 238/452 (52%), Gaps = 43/452 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  H+G+AR M+ FDV+ R LR       VT+VRNITDIDDKII RA    
Sbjct: 1   MYVCGMTVYDLCHVGHARSMVAFDVVQRWLRASGL--AVTFVRNITDIDDKIIRRA---- 54

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             +   + I  +T +   +  +D   L    PTH PRAT+++PQM+ +++ +   G AY 
Sbjct: 55  --VESGETIGALTRRMIDEMYRDADALGVERPTHDPRATDYVPQMLDIVRRLEDQGLAYR 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---G 203
           A + ++ F     P YG  S + +DE + G RV  +  K++P DF+LWK +   EP    
Sbjct: 113 APSGDVNFAVRKFPGYGKLSGKTLDELQAGERVAVQDGKQDPLDFVLWKAAKANEPQEAK 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W+S +G+GRPGWHIECSAM    LG+ FDIHGGG DL FPHHENEIAQS  A+  +  A 
Sbjct: 173 WDSGYGQGRPGWHIECSAMCGALLGQTFDIHGGGADLQFPHHENEIAQSEGANG-QPLAR 231

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGF+N++  KMSKS GNF TI ++L         + A  IR  ++ +HYR P++++
Sbjct: 232 FWMHNGFINIDNEKMSKSLGNFFTIRDVLG-------QFDAETIRFFVVRSHYRSPLNYS 284

Query: 324 VQRLTEAEILLSKWPQT----STSKGIIDPA------VLSALYNDLNTVSAIQALHKLAR 373
              L +A   L +        + ++  ID A        +A+  D  T  A+  L  LA 
Sbjct: 285 DAHLQDARGGLKRLYTALSVVAPAEVPIDWADPYAARFKAAMDEDFGTPEAVAVLFDLAG 344

Query: 374 EST--KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE-----KLVQERLILLKMKKFS 426
           E    ++  L     A    LG+              ++       +  R      + F+
Sbjct: 345 EVNRRRSATLAGQLKALGGCLGLLQGDAQTFLQAGTGLDASAIAAQIAARAAAKGARNFA 404

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            AD IR +L ++G +L+D          T W+
Sbjct: 405 EADRIRAELLAQGIVLKDS------PAGTTWE 430


>gi|118431525|ref|NP_148045.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|150421675|sp|Q9YBK6|SYC_AERPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116062850|dbj|BAA80592.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 472

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 170/495 (34%), Positives = 239/495 (48%), Gaps = 63/495 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL R+   F    P  + MYVCGPTVYD+ HIG+AR   VFD + R LR    + 
Sbjct: 2   IRVFNTLGRRKEVFNPYSPPLVGMYVCGPTVYDYTHIGHARTFTVFDAIKRYLRLRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITDIDDKII RAR+E            I  + ++ +++    L      H PR
Sbjct: 61  -VFHVQNITDIDDKIINRAREE------GRDWREIVREYSRDYLEGLGSLGIQI-DHHPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T+HI  +I  I+ +I  G+AY A    + F+    P YG  S   + ++         +
Sbjct: 113 VTDHISDIIRFIEGLIEKGYAYVAESGSVYFEVDKYPGYGMLSGH-LSKEAWRQEEDVLH 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK+P DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG   DIHGGG+DL+FP
Sbjct: 172 EKKSPYDFALWKAAKPGEPSWESPWGRGRPGWHIECSVMSSRYLGSRIDIHGGGVDLVFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS       +    W+H  +L ++G KMSKS GN I + E L       R W 
Sbjct: 232 HHENERAQSESYFG-HRWVRYWLHASYLTIKGEKMSKSLGNIIPLREAL-------REWG 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
              +RL +L +HYR  +D++ + L +   L  +  Q + S G                  
Sbjct: 284 PGPLRLWLLSSHYRSNLDYSEEALGQYRRLYERLRQAADSIGRRLERAEPKGRLGEGELE 343

Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLAR------ESTKNHDLL----PIFNASA 389
                  +      A+ +D N   A+ +L +         E T+++ LL     I     
Sbjct: 344 TVERLKGVVRRWHEAMSDDFNMGKAMSSLWEFTTIYFREVEQTESYTLLWLSWRILTGFN 403

Query: 390 HILGIEV----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            +          +          ++ LV  R  L + K +  AD IR +L   GF+L D 
Sbjct: 404 SVYAFAPDIVEARRPERSLEDSLVQALVDVRSELRRRKMYDLADEIRSRLAQLGFVLHDK 463

Query: 446 KNPDNGQRMTRWKQK 460
                    T W+++
Sbjct: 464 ------GEKTEWRRR 472


>gi|268610792|ref|ZP_06144519.1| cysteinyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
 gi|268611696|ref|ZP_06145423.1| cysteinyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 473

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 158/483 (32%), Positives = 234/483 (48%), Gaps = 52/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L  K  EF   +   + MY CGPTVY +AHIGN R  I+ D+L + LRY   + 
Sbjct: 1   MYLYNSLSHKKEEFIPHEEGKVSMYTCGPTVYHYAHIGNLRSYIMEDILEKYLRYTGYD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F  D  +L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTVM------EIAKFYTDAFFDDCKKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT +I + I +I +++  G+AYEA   I FDTS +  Y  F+    ++  
Sbjct: 113 NIKTPDVVVPATTYIDEFIRVISSLMEKGYAYEAGGNIYFDTSKLDKYYVFNDFNEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V    +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S   LG+
Sbjct: 173 VGVRDGVEADENKRNKADFVLWFTKSKFDDQELKWDSPWGIGYPGWHIECSCISMKNLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS       K  N W H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHILHLNTNDGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
            L E      + +   + R   L +HYR+ + F+   L  A+    K  +          
Sbjct: 292 LLEE------KGYKPVIYRFFCLQSHYRKSLVFSWDNLDNAKAAYGKLIEKIAPLTQESG 345

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE- 395
                     +D A   AL +D+NT  AI  L+ + +        L + N    +LG++ 
Sbjct: 346 GDIDKAEYERLDKAFREALDSDVNTAMAITVLYDVLKSKANAATKLALINDFDKVLGLDL 405

Query: 396 ------VCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
                   +E  N   +I   + +LV++R    K K F+ AD +R ++ S G+ +++ + 
Sbjct: 406 VANAKLFLEESANASADIPAEVMELVEQRKEARKAKDFALADELRDKIASLGYEVKETRQ 465

Query: 448 PDN 450
              
Sbjct: 466 GTE 468


>gi|163839174|ref|YP_001623579.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|189082074|sp|A9WLY4|SYC_RENSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|162952650|gb|ABY22165.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 493

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 164/503 (32%), Positives = 229/503 (45%), Gaps = 72/503 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T   ++ +F  +      +Y CG TV    HIG+ R  +VFD L R L++   
Sbjct: 1   MTLRFYDTATAEVRDFAPLVEGKASLYYCGATVQSEPHIGHLRSALVFDQLTRWLQFRGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +   T VRN+TDIDDKI+ +A +        +       K  QQF     +L    P ++
Sbjct: 61  Q--TTVVRNVTDIDDKILAKAAE------AGEEWWARAYKYEQQFNAAYDKLGITRPDYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT +I +M  LIQ++I  GHAY A   + ++ FD  S   YGS + + ID+ +     
Sbjct: 113 PRATGNISEMHSLIQDLIDRGHAYPAPDGSGDVYFDVRSWGKYGSLTHQNIDDMQAAADA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  KK+  DF LWK   P EP    W SPWG GRPGWH+ECSAM   YLG  FDIHGG
Sbjct: 173 DPR-GKKDARDFALWKGRKPEEPTTASWPSPWGAGRPGWHLECSAMVGKYLGDAFDIHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE+AQS  A      AN W+HNG +  +G KMSKS GN I   EL     
Sbjct: 232 GLDLRFPHHENEMAQSQAA--GRPFANFWMHNGLVAYQGEKMSKSIGNVIGPGELFA--- 286

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLSKWPQ--- 339
                    V+R  +   HYR  +D++ +               L  A   + +      
Sbjct: 287 ----QASPRVVRYYLGQAHYRSVLDYSPESLEEAAAALARIDGFLVNAGANVQRVEVEDS 342

Query: 340 ----------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---HD 380
                                     A + A+ +DLN   A+  LH+  R         D
Sbjct: 343 GHMYLPPAAKQGFGWFAYAPLSDTPAAFVEAMDDDLNVPKALAVLHETVRAGNSAIASSD 402

Query: 381 LLPIFN------ASAHILGIE--VCKEHLNKNISIAIEKLV----QERLILLKMKKFSSA 428
           L+ +        A   +LG+      +  +   + A+E LV    QER      K ++ +
Sbjct: 403 LVELQKKFEAVLAMLDVLGLSSIATDQAADNGSTHALETLVQTRLQERQQARTEKNWARS 462

Query: 429 DYIRKQLESKGFILEDYKNPDNG 451
           D IR +L   G  +ED  N    
Sbjct: 463 DEIRDELAEAGIKIEDSSNGATW 485


>gi|291529941|emb|CBK95526.1| cysteinyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 472

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 165/482 (34%), Positives = 242/482 (50%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  K  EF       + MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F +D T+L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTVM------EIAKYYTDAFFEDCTKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT+ I   I +I ++I  G+AYEA   I FDTS +  Y  F+  K ++  
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIEKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S  +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDDQELKWDSPWGVGYPGWHIECSCISMKHLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS       K  N W H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSK 344
            LLE+     + +   + R   L++HYR+ + FT + L  A+    K            +
Sbjct: 292 -LLES-----KGYDPVIYRFFCLLSHYRKSLVFTYENLDNAKGAYEKLVAKIAQLLKAEQ 345

Query: 345 GIIDPA--------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           G +D A          +A+ ND+NT  AI AL+ + +  T     L +      +L + +
Sbjct: 346 GEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADTTPATKLALIADFDKVLSLSL 405

Query: 397 CKE---------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++           N  +   I +L ++R    K K F+ AD +R ++ + G+ +E+ + 
Sbjct: 406 IEKAKAVNEKPADTNDELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEETRQ 465

Query: 448 PD 449
             
Sbjct: 466 GT 467


>gi|325968781|ref|YP_004244973.1| cysteinyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323707984|gb|ADY01471.1| cysteinyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 503

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 174/473 (36%), Positives = 238/473 (50%), Gaps = 46/473 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+ + +     + P   R+YVCG T YD  H+G+AR  + +D+L R L Y   E  V
Sbjct: 26  VYNTVSKNLERITLLRPGLARIYVCGLTPYDSMHVGHARTFVFYDILRRYLEYLGVE--V 83

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +V N TDIDDKII +A+QE  S  IN     + S+  ++F     +L        P+ T
Sbjct: 84  RFVTNFTDIDDKIINKAKQEFGSDLINRWY-EVPSRYIKEFFDAIDKLYVKRAYAYPKVT 142

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +I  M+  IQ ++    AY + +  + FD + +P YG FS +KI++   G RV  +  K
Sbjct: 143 ENISDMLKWIQELVGKDLAYVSPDGSVYFDITKVPRYGEFSGQKIEDLIAGARVEPEPGK 202

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           KNP DF LWK  +  EP W SPW  GRPGWH+EC  MSS YLG  FDIHGGG DLIFPHH
Sbjct: 203 KNPLDFALWKSWSEGEPWWNSPWSPGRPGWHLECVVMSSKYLGVPFDIHGGGQDLIFPHH 262

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           ENEIA +     I+  A  WIH G + ++G+KMSKS GN I I ++L       + +   
Sbjct: 263 ENEIAIARVYFGIDYFAKYWIHVGLVTIKGQKMSKSLGNIIPIMDVL-------KKYDGE 315

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID------- 348
           V+RL   M  YR+P+DF    L +    L                +   G  D       
Sbjct: 316 VLRLYYSMAQYRKPMDFDPDALDQVRNSLMSIYAAYDMLTEVINEAPDTGDEDNKLLSRV 375

Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHI 391
                +   +L ND+NT  A+ AL   AR  T                + L  F   A+I
Sbjct: 376 NDFVNSFEESLNNDINTSGAVAALMDFARYITSTVIYNTQHFSRTALMNALTAFTDLANI 435

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           LGI + +  L  +I   IE L++ R  L   K F  AD IR +L   G ++ D
Sbjct: 436 LGI-LNRTRLPPSIISLIEALIRVRAQLRARKMFDLADEIRNELGRLGVVISD 487


>gi|160916264|ref|ZP_02078471.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
 gi|158431988|gb|EDP10277.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
          Length = 446

 Score =  471 bits (1213), Expect = e-130,   Method: Composition-based stats.
 Identities = 157/467 (33%), Positives = 233/467 (49%), Gaps = 49/467 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++K++N++ + I EF+ +    +RMYVCGPTVY++ HIGN RP++VFD L R L+    
Sbjct: 1   MEMKLFNSMTQSIEEFKPLHEGEVRMYVCGPTVYNYPHIGNVRPIVVFDTLKRTLQAIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V N TD+DDKII+ A++         +   IT K  + + +D   L  + P   
Sbjct: 61  N--VKMVSNYTDVDDKIIKVAKE------AGVSEKEITEKFIKAYNEDRLSLHAMMPDAA 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ T  +  +I  I  ++  G+AY  + ++ F  +S+ +YG  S ++I++  +G R+ E 
Sbjct: 113 PKVTETMDAIIAFINLLVEKGNAYVVDGDVYFRVNSVDDYGKLSNQQIEDLMVGARIDEN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGLDLI 241
             K+NP DF LWKR+      W+SPW  GRPGWH EC  M +    +   DIHGGG+DL 
Sbjct: 173 SKKENPLDFTLWKRTEEG-IRWQSPWSLGRPGWHTECVVMINDVFKEPIIDIHGGGMDLK 231

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  WIHNG +N++G KMSKS GN I   +++ +       
Sbjct: 232 FPHHENEIAQSKAAYGTA-IAKYWIHNGMVNIDGEKMSKSLGNVIWAKDMIASIG----- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------TSTSKG 345
               V+R  ML THYR P++     +  A   LSK  Q                      
Sbjct: 286 --GNVLRWLMLSTHYRSPLNINEDGIETARKELSKVMQPLKQAYVKLSLADHVIGEDHDE 343

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGI 394
           ++    L+A+ +DLNT +A  AL +  +   +      I                 ILGI
Sbjct: 344 VLVAPFLAAMEDDLNTPNAFAALFEAVKVFNQTLRQREIDYAKLSKQCVSIEKMLDILGI 403

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           E  +  L+       + L  +    +K K F  AD  R +L  +G +
Sbjct: 404 ESQRLVLSDED----KALHGKWRAAVKEKDFEQADMYRAKLIERGIL 446


>gi|325844466|ref|ZP_08168193.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489140|gb|EGC91524.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 446

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 166/467 (35%), Positives = 237/467 (50%), Gaps = 51/467 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNT  R+  EF+ I+ + +RMY+CGPTVY++ HIGNARP++ FD+++R  +Y   E 
Sbjct: 1   MLIYNTYTREKEEFRPIEENKVRMYICGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+DDKII RA +E          + I+ K    F++    L  L  T  P+
Sbjct: 60  -VEFVSNVTDVDDKIINRAIEE------GVTEAQISEKYLNYFLECNKVLNALPLTAMPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  MI  I  ++    AY  + ++ F    +  YG  S +KIDE ++G R+ E   
Sbjct: 113 VTESMDSMIEFINQLVERDFAYAVDGDVYFRIDKVREYGQLSGKKIDELEVGARIAEDSK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK++      W+SPWG GRPGWH EC  M ++      DIHGGG DL FPH
Sbjct: 173 KENPLDFVLWKKTDKG-ITWDSPWGAGRPGWHTECVVMINNQFHGKIDIHGGGTDLQFPH 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS C       AN W+H G L L   KMSKS GN I + +L+E          A
Sbjct: 232 HENEIAQSLCMY-EHNIANYWMHVGRLGLNNEKMSKSIGNVINVKDLIE-------QIDA 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIIDPA------- 350
              RL ML  HYR+PI++T + +  A     K   T           G +D         
Sbjct: 284 NAFRLFMLSVHYRQPINYTEENIQLAVKEWQKVKSTYDQLHLKLDLAGALDVEPSVVPEI 343

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHILGI 394
                  + AL +D NT +AI +L+   +E  K          N   L       +I G 
Sbjct: 344 EALMNQFVEALEDDFNTANAIASLYGAIKEINKMVRAKASDEANRYALMTLQNMTYIFGF 403

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           ++ K    K ++    +L+Q      K K F+ AD +R +L++   +
Sbjct: 404 DLNK----KRLTDEERELMQAWEEARKAKDFAKADELRGKLQALNVL 446


>gi|323214246|gb|EFZ99004.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 310

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 144/325 (44%), Positives = 201/325 (61%), Gaps = 17/325 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + 
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYD 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLT 328
           A  +R  ++  HYR  ++++ + L 
Sbjct: 286 AETVRYFLMSGHYRAKLNYSEENLK 310


>gi|152964879|ref|YP_001360663.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189082067|sp|A6W6G0|SYC_KINRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151359396|gb|ABS02399.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 471

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 162/484 (33%), Positives = 241/484 (49%), Gaps = 52/484 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + ++++    + EF  + P  + +YVCG T     H+G+ R  +VFDVL R L     
Sbjct: 1   MTLHLHDSAAGAVREFAPLVPGQVGIYVCGATPQGSPHLGHVRAQVVFDVLRRWLVRSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT VRN+TDIDDKI+ +A +                +  ++F      L  L PT +
Sbjct: 61  E--VTLVRNVTDIDDKILAKAAEAGTEWW------AHAYRFEREFSAAYAALGVLPPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT H+P+M+ LIQ ++  GHAY   + + ++ FD  S P YG  + +++D+ +     
Sbjct: 113 PRATGHVPEMVELIQRLVERGHAYAAADGSGDVYFDVRSWPAYGELTHQRLDDMEPAADA 172

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P DF LWK + P EP    W +PWGRGRPGWH+ECSAM+  YLG  FD+HGG
Sbjct: 173 DPR-GKRDPRDFALWKGAKPGEPATASWATPWGRGRPGWHLECSAMAGRYLGPRFDVHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           GLDL FPHHENE AQS  A      AN W+HN F+ + G KMSKS GN + +  LLET +
Sbjct: 232 GLDLRFPHHENEQAQSRAAGDG--FANFWLHNHFVTMSGEKMSKSLGNVLGVPHLLETHR 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGII 347
                  A V+R  ++  HYR  ++ +   L EAE   S+               + G +
Sbjct: 290 -------AVVLRYYLVSGHYRTHLEHSENSLVEAEAAYSRLEGLLRRAAERLGGLAAGEV 342

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
             A  +A+ +DL T +A+  LH+ AR                      A   +LG++   
Sbjct: 343 PAAFAAAMDDDLATPTALAVLHETARAGNSALAAGDEAALRTAAGQLRAGLDVLGLDPFA 402

Query: 399 EHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           E               + + +   +++R      K F++AD +R  L+S G ++ED    
Sbjct: 403 EPWASQTTGSDAARTALDVLVRARLEDRATARATKDFATADAVRDSLKSAGIVIEDTPTG 462

Query: 449 DNGQ 452
               
Sbjct: 463 ARWA 466


>gi|330443848|ref|YP_004376834.1| cysteinyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328806958|gb|AEB41131.1| cysteinyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 475

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 157/494 (31%), Positives = 234/494 (47%), Gaps = 60/494 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +K + +YNT  R+   F     S +++Y CGPTVYDFAHIGN R  I  D+L R L +  
Sbjct: 7   QKPLYLYNTASRQKEAFSPY-ASPVKLYTCGPTVYDFAHIGNFRTYIFEDLLKRTLIFLG 65

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT+V NITD+DDK +  A           ++   T    Q F +D   L       
Sbjct: 66  Y--SVTHVMNITDVDDKTLAGA------CKQGISLQEYTQPYIQAFFEDLETLHISRADA 117

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-V 179
            PRAT++IPQMI  I+ ++  G AY   +  + F  S   +YG  S   + + +  T+  
Sbjct: 118 YPRATHYIPQMIQAIEKLLDQGAAYIGHDASVYFSISRFSSYGKLSHLHLQDLQCCTQNT 177

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K+N  DF+LWK        +  WESP+G+GRPGWH+ECS M+   LG+  DIH G
Sbjct: 178 SDEYDKENLCDFVLWKAYNSERDGKIYWESPFGKGRPGWHLECSIMAMELLGESIDIHAG 237

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D IFPHHENEIAQS      +  A  W+H+  L ++G+KMSKS GNF+T+ +L     
Sbjct: 238 GVDNIFPHHENEIAQSETLSG-KPFARYWLHSEHLLVDGKKMSKSLGNFLTLRDL----- 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------ 350
              R +    +R  +L +HYR  ++FT + L      L +     +      P       
Sbjct: 292 -THRGFSGEELRYMLLQSHYRTQLNFTEEGLLSCRQALKRLRDFISRLQEPYPDGEQPSE 350

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARES-----------TKNHDLLPIFNA 387
                          AL NDLN    + +L     E+                +L +   
Sbjct: 351 ATRTVAKTLLTNFTDALTNDLNIAVGLASLFDFVHETHSLIDAGSFSKADAEHILALLKH 410

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +L +      ++  I   + +LV +R      K +  AD++R ++ + GF++ED K+
Sbjct: 411 LNQVLKVLPISASIS--IPDRVWELVMKREKARTSKSWKEADFLRNEILALGFVVEDSKS 468

Query: 448 PDNGQRMTRWKQKP 461
                     K KP
Sbjct: 469 GP--------KVKP 474


>gi|62185411|ref|YP_220196.1| cysteinyl-tRNA synthetase [Chlamydophila abortus S26/3]
 gi|81312439|sp|Q5L546|SYC_CHLAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|62148478|emb|CAH64248.1| putative cysteinyl-tRNA synthetase [Chlamydophila abortus S26/3]
          Length = 476

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 163/486 (33%), Positives = 248/486 (51%), Gaps = 52/486 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ + +YNT  R    F   +   +++Y CGPTVYD+AHIGN R  I  D+L R+L   +
Sbjct: 8   RQNLYLYNTASRTKELFSPSNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRIL--LF 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V +V NITD+DDK +  A         N ++   T+   Q F KD   L  L    
Sbjct: 65  FGYSVKHVMNITDVDDKTLAGA------CKNNISLDTYTAPFIQAFFKDVATLHILPADA 118

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            PRAT++IPQM+  I+ ++  G AY   ++ + F     P+YG  S+ ++   +  +R+ 
Sbjct: 119 YPRATHYIPQMLVAIRKLLDDGIAYIGQDHSVYFSIKEFPSYGKLSQLQLQNLQCCSRIA 178

Query: 181 -EKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K+N +DF+LWK           WESP+G+GRPGWH+ECS M+   LG   DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYDKHRDGHIYWESPFGKGRPGWHLECSIMAMELLGPSIDIHAG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D IFPHHENEIAQS      +  +  W+H+  L ++G+KMSKS GNF T+  LL+   
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKG 345
              R +    IR  +L +HYR  ++FT + L      L +            P+++T   
Sbjct: 295 ---RGFSGAEIRYMLLQSHYRMQLNFTEEGLMACRQALKRLRDFISRLESPYPESATISE 351

Query: 346 IID-------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
            ID           +A+ NDLN  +A+ +L     ++    D           +L I   
Sbjct: 352 GIDQCGQRFLQDFSNAIANDLNIAAALASLFDFIHQTNSRIDQSHFTQADSHYVLDILKK 411

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              +LG+      L   I   + +LV+ER I  K K +  AD +R Q+ S G+++ED K+
Sbjct: 412 INTVLGVIPFSTSLE--IPSEVARLVEEREIARKEKNWKQADVLRNQIASFGYVVEDTKS 469

Query: 448 PDNGQR 453
               ++
Sbjct: 470 GPKVKK 475


>gi|291542167|emb|CBL15277.1| cysteinyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 468

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 152/471 (32%), Positives = 223/471 (47%), Gaps = 35/471 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L +   EF    P  + MY CGPTVY +AHIGN R  I+ DVL + LR+   +  V
Sbjct: 3   LYNSLGQTKQEFVPHTPGKVNMYTCGPTVYHYAHIGNLRTYIMEDVLEKYLRFSGYD--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
             V NITD+     +    E   +      +  +  I    T  F  D  +L    P   
Sbjct: 61  NRVMNITDVGHLSSDADTGEDKMLSGAKREHKTVMEIAKFYTDAFFADCEKLNIKRPDVV 120

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--VP 180
             ATN I   I +I  ++  G+AY A   + FDTS + NY  F     D+  +G R  V 
Sbjct: 121 EPATNCIDDFINMISVLLEKGYAYIAGGNVYFDTSKLDNYYVFGNMNEDDLAVGVRDSVE 180

Query: 181 EKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           E  +K+N ADF+LW    +    E  WESPWG G PGWHIECS +S  + G+  DIH GG
Sbjct: 181 EDENKRNKADFVLWFTKSKFDSQELKWESPWGVGYPGWHIECSCISYKHCGEYLDIHCGG 240

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D  FPHH NEIAQS       K    W H   LN    KMSKS G F+T++ L E    
Sbjct: 241 IDNAFPHHTNEIAQSEAFLG-HKWCPYWFHVLHLNDARGKMSKSKGGFLTVSLLEE---- 295

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---TSTSKGIIDPA---- 350
             + +   V R+  L +HYR+P+ F+   L       +K  +     +  G  D A    
Sbjct: 296 --KGYNPLVYRMFCLQSHYRKPLTFSYDNLDNTATAYNKLVKRISALSRDGEPDMAKAEE 353

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC------KEH 400
                  AL NDLNT  A+  ++ + +    +   L +      +L +++       K  
Sbjct: 354 LTKGFSEALDNDLNTSLALTCVYDVLKADADDATKLYVIGEFDKVLSLDLTKVPESNKAD 413

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            + + +  +E+L+ +R      K +++AD IR +L+    +++D K+    
Sbjct: 414 ADDDFAKEVEELIAQRTKARAEKDWATADAIRDKLKEMKVVVKDTKDGIEW 464


>gi|282890732|ref|ZP_06299252.1| hypothetical protein pah_c026o057 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499325|gb|EFB41624.1| hypothetical protein pah_c026o057 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 489

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 159/487 (32%), Positives = 239/487 (49%), Gaps = 51/487 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            I+++NT +R        +   I +Y CGPTVY+FAHIGN R  +  D+L R L+++  +
Sbjct: 17  PIQLFNTEKRVKETLV-AEKGQITLYTCGPTVYNFAHIGNFRTYVFEDLLRRTLKFFGLK 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  V N+TD+DDK I+ A      I     ++  T      F +D   L        P
Sbjct: 76  --VKQVMNLTDVDDKTIKGA------ISKGITLNAFTQPYKDAFFQDLATLHIEPAEVYP 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
            AT++I  MI +IQ +I  G AY+  +  I +     P YG  S  K+DE K+G      
Sbjct: 128 AATDYIQPMIEMIQTLIDKGFAYKGQDGSIYYAIRKFPRYGCLSHLKLDELKVGASERVA 187

Query: 180 PEKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            ++Y K+N +DF+LWK   P    +  W+SP+G GRPGWH+ECSAM+   LG   DIH G
Sbjct: 188 ADEYDKENVSDFVLWKNYDPQRDGKIYWDSPFGPGRPGWHLECSAMAMQLLGDTIDIHVG 247

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D +FPHHENEIAQS      +     W+H   L ++G+KMSKS GNF T+ +LL    
Sbjct: 248 GVDNMFPHHENEIAQSEACSG-KTFVKHWMHAEHLIVDGKKMSKSMGNFYTLRDLL---- 302

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGII 347
              + +    +R  +L THY+  ++FT + L      L +             S   G +
Sbjct: 303 --AKGFSGVEVRYMLLQTHYKTQLNFTFEGLDAVRHSLRRVQDFIRRVQEIKGSADSGSV 360

Query: 348 DP-------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
            P       A   AL +DLN   A+ AL ++ RE             +  ++L       
Sbjct: 361 APVIERTLYAFAKALADDLNISVALAALFEMIREINTLCDKGLVGDSEAAEILEFLQKIN 420

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +L I    E   + I   ++  +++R I  + K +S AD +R  + S G+I+ED     
Sbjct: 421 QVLAI-FTFEVQAEQIPQELQDALEQRNIARQNKNWSEADRLRDLIHSHGYIIEDSVKGA 479

Query: 450 NGQRMTR 456
             +++ R
Sbjct: 480 RLKKIER 486


>gi|254708550|ref|ZP_05170378.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261316050|ref|ZP_05955247.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261305076|gb|EEY08573.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
          Length = 470

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 208/464 (44%), Positives = 270/464 (58%), Gaps = 52/464 (11%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG + VTY RNITD+DDKI  RA ++
Sbjct: 2   RMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGAQHVTYARNITDVDDKINARAARD 61

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           +P +P N+AI  +T     QF  D T L  L PT QPRAT H+ +M  +I  ++  G AY
Sbjct: 62  YPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQPRATEHMDEMRAMIDRLVQRGVAY 121

Query: 147 EANNEII-----FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
            A + ++      +    P YG+ +RR +DE   G RV    +K++  DF+LWK S   E
Sbjct: 122 VAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGARVDVASYKRDEMDFVLWKPSKKGE 181

Query: 202 PGWESPWG---RGRPGWHIECSAMSSHYL--------------GKVFDIHGGGLDLIFPH 244
           PGW SP G    GRPGWHIECSAMS   L                 FDIHGGG+DL+FPH
Sbjct: 182 PGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGLKCDDPERNQFDIHGGGIDLVFPH 241

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQSCCA   E+ ANIW+HNGFL +EG+KMSKS GNFITI ++L         W  
Sbjct: 242 HENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKSLGNFITIRDVLNDGLPQLGEWGD 301

Query: 305 PVI---------RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------ 349
             +         RL+ML THYREPI++T QRL E+   L +W      +G   P      
Sbjct: 302 NTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESADELHRWYGLLRDEGFGAPEKLSHA 361

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI- 407
            AV +AL +DLN+ +AI AL    R++ K  D+  +    A ++G+         ++ I 
Sbjct: 362 SAVAAALCDDLNSWAAITAL----RQAFKVRDVAALGEGMA-LMGLLDPYFVTASDVPIF 416

Query: 408 --------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
                   AI   + ERL  +  K ++ AD IR +L  +G  L+
Sbjct: 417 ARADVDASAIAARIAERLNFINAKNWAEADRIRDELLQEGVQLK 460


>gi|291556370|emb|CBL33487.1| cysteinyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 472

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 163/482 (33%), Positives = 242/482 (50%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  K  EF       + MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F +D T+L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTVM------EIAKYYTDAFFEDCTKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT+ I   I +I ++I  G+AYEA   I FDTS +  Y  F+  K ++  
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIEKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S  +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDAQELKWDSPWGVGYPGWHIECSCISMKHLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS       K  N W H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSK 344
            LLE+     + +   + R   L++HYR+ + FT + L  A+    K            +
Sbjct: 292 -LLES-----KGYDPVIYRFFCLLSHYRKSLVFTYENLDNAKGAYEKLVAKIAQLLKAEQ 345

Query: 345 GIIDPA--------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           G +D A          +A+ ND+NT  AI AL+ + +        L +      +L + +
Sbjct: 346 GEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADATPATKLALIADFDKVLSLSL 405

Query: 397 CKEHLN---------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++  +         + +   I +L ++R    K K F+ AD +R ++ + G+ +E+ + 
Sbjct: 406 IEKAKSVNEKPADTAEELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEETRQ 465

Query: 448 PD 449
             
Sbjct: 466 GT 467


>gi|167750381|ref|ZP_02422508.1| hypothetical protein EUBSIR_01355 [Eubacterium siraeum DSM 15702]
 gi|167656741|gb|EDS00871.1| hypothetical protein EUBSIR_01355 [Eubacterium siraeum DSM 15702]
          Length = 472

 Score =  470 bits (1209), Expect = e-130,   Method: Composition-based stats.
 Identities = 163/482 (33%), Positives = 241/482 (50%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L  K  EF       + MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59

Query: 65  CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
            V  V NITD+          DDK+++ A++EH ++        I    T  F  D T+L
Sbjct: 60  -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTVM------EIAKYYTDAFFDDCTKL 112

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
               P     AT+ I   I +I ++I  G+AYEA   I FDTS +  Y  F+  K ++  
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIKKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172

Query: 175 MGTR--VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +G R  V E  +K+N ADF+LW    +    E  W+SPWG G PGWHIECS +S  +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDDQELKWDSPWGVGYPGWHIECSCISMKHLGE 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D  FPHH NEIAQS       K  N W H   LN    KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSK 344
            LLE+     + +   + R   L++HYR+ + F+ + L  A+    K            +
Sbjct: 292 -LLES-----KGYDPVIYRFFCLLSHYRKSLVFSYENLDNAKGAYEKLVARIAQLLKAEQ 345

Query: 345 GIIDPA--------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           G +D A          +A+ ND+NT  AI AL+ + +  T     L +      +L + +
Sbjct: 346 GEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADTTPATKLALIADFDKVLSLSL 405

Query: 397 CKE---------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            ++            + +   I +L ++R    K K F+ AD +R ++ + G+ +E+ + 
Sbjct: 406 IEKAKAVNEKPTDTAEELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEETRQ 465

Query: 448 PD 449
             
Sbjct: 466 GT 467


>gi|152990845|ref|YP_001356567.1| cysteinyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166225301|sp|A6Q401|SYC_NITSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|151422706|dbj|BAF70210.1| cysteinyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 465

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 159/488 (32%), Positives = 250/488 (51%), Gaps = 57/488 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++ +++    + +   +I++YVCGPTVYD AH+G+AR  I FD+L R L     + 
Sbjct: 1   MVIYDSSKKEYCSLEPLKNRHIKVYVCGPTVYDDAHLGHARSAIAFDLLRRTLNALGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             T+++N TDIDDKII++            ++  ITS   Q++++D   L       +P+
Sbjct: 60  -TTFMKNFTDIDDKIIKK------MNETGKSLQEITSYYIQRYLEDMEALGVQRADIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT ++  MI +I+ ++    AY+  N +I FDTS    Y + S +   +++  +R+    
Sbjct: 113 ATQNLDAMIDMIERLLQKECAYQTPNGDIYFDTSKDEKYCTLSHKC--DEESMSRIEPNP 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            KKNPADF LWKR     +  ++SP+G+GRPGWHIECSAM   +L         DIH GG
Sbjct: 171 DKKNPADFALWKRCKGEGDVCFDSPFGKGRPGWHIECSAMIDKHLAYHDTPFQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE AQ+ CA   E  A  W+HNGF+ + G KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEAAQTRCACNQE-LAKYWMHNGFVTISGEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIID 348
             + +   ++R  +L THYR  ++F  + L  ++  L K           Q ST +    
Sbjct: 285 --KVYDGEILRFYLLSTHYRSDLNFNEEDLLASKKRLDKLYRLKKRVYGVQASTPQKEFV 342

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVC 397
             +L AL  DLN    + A+ +    + ++ D           ++      + +LGI   
Sbjct: 343 DELLQALSQDLNISKTLAAIDQFIAYANEHLDNNPKDKAFKKQIVANIEYISKLLGIGHK 402

Query: 398 KEH------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             +      +++     IE+L+++R    K K F  AD IR++L S G  + D       
Sbjct: 403 DAYSYFHLGISEEEKQKIEELIEKRTTAKKEKNFQLADSIREELRSMGIAIMDT------ 456

Query: 452 QRMTRWKQ 459
            + T W++
Sbjct: 457 PQGTLWEK 464


>gi|146304825|ref|YP_001192141.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|187631639|sp|A4YIG5|SYC_METS5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145703075|gb|ABP96217.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 465

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 150/482 (31%), Positives = 231/482 (47%), Gaps = 53/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL +++  F+  +P+ ++MYVCGPTVYD  HIG+ R  + FD + R LR      
Sbjct: 1   MQVFNTLGKRLQSFEPHEPNTVKMYVCGPTVYDEVHIGHGRTFVAFDAMSRYLRVKGYN- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V+NITDIDDKII +AR+      +  + + ++   ++ +++    L        P+
Sbjct: 60  -VVRVQNITDIDDKIINKARE------LGKSWNEVSEYYSKSYLEHIGALKVKI-DMHPK 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI ++I  +Q +I  GHAY AN  + FD  + P YG  S  K +E   G        
Sbjct: 112 VTTHIKEIIDFVQRLIDSGHAYVANGSVYFDVDTYPGYGELSNVKKEEWDQGE--EIVKE 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK   P EP WESPWG+GRPGWHIECS MS+ YLG   DIHGGG+DL+FPH
Sbjct: 170 KRHPYDFALWKAYKPGEPYWESPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGMDLVFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+            W+H  FL +   KMSKS GN + + E L         +  
Sbjct: 230 HENERAQTESLTG-STWVKYWMHVAFLTIRKEKMSKSKGNIVPLKEALS-------KYGP 281

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
             +R   L + YR PI+++ + L ++   L +     +    I                 
Sbjct: 282 STLRYWFLSSQYRNPIEYSEEILEQSSRSLQRLKDAISVLRKIIQKGPAHYAKEEDVKVQ 341

Query: 350 --------AVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFNASAHI 391
                        + ND +T +A+ ++H++A           +       L  F     +
Sbjct: 342 EEIVRAISRFDEHMENDFDTSNALTSIHEIASIVFSKLQYSEDVFGALIALDGFRKFNEV 401

Query: 392 LGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             +   +       ++  I+ +++ R  L K + +  +D IR  L   G  + D K    
Sbjct: 402 FAVMDEEFSAELDRLTKVIDAVIEVRNYLRKKQMYDLSDQIRDILSRSGVKILDSKEGST 461

Query: 451 GQ 452
            +
Sbjct: 462 WR 463


>gi|262165957|ref|ZP_06033694.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262025673|gb|EEY44341.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 372

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 135/385 (35%), Positives = 197/385 (51%), Gaps = 38/385 (9%)

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSS 158
           T +  Q+   D   L    P  +PRAT +I ++I L+Q +I  G AY A+  +++F+   
Sbjct: 2   TERLIQEMYADFDALNIKRPDVEPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGK 61

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
              YG  S++ +++ + G RV  +  K++P DF+LWK S P EP WESPWG GRPGWHIE
Sbjct: 62  YDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIE 121

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           CSAM+S  LG  FDIHGGG DL FPHHENEIAQSCCA    +  N W+H+G + ++  KM
Sbjct: 122 CSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKEKM 180

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GNF TI ++L         + A  +R  ++  HYR  ++++ + L +A   L +  
Sbjct: 181 SKSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLY 233

Query: 339 QTSTSKGIIDPA---------VLSALYNDLNTVSAIQALHKLARESTK--------NHDL 381
                     PA           +A+ +D NT  A   L  +ARE  +           L
Sbjct: 234 NALRGLDRSVPAAGGEEYLSRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASAL 293

Query: 382 LPIFNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
             +    A ++GI         +       +  IE L++ R      K +++AD  R +L
Sbjct: 294 GSLMRELADVIGILYQEPETFFQGSAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKL 353

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
              G +LED      G   T W++K
Sbjct: 354 NEMGIVLED------GPNGTTWRRK 372


>gi|288560827|ref|YP_003424313.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
 gi|288543537|gb|ADC47421.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
          Length = 480

 Score =  469 bits (1208), Expect = e-130,   Method: Composition-based stats.
 Identities = 169/496 (34%), Positives = 245/496 (49%), Gaps = 78/496 (15%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+  E   +    I+++VCGPTVYD AHIG+ R  I FD + R L +      V Y++
Sbjct: 1   MTREKGELNTLFADKIKLFVCGPTVYDDAHIGHGRTYISFDTIKRYLEFKGY--SVFYLQ 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           NITDIDDKII RA++             +  K  ++F++D   L   +  +  RAT+HI 
Sbjct: 59  NITDIDDKIINRAKES------GIDSKYLAEKFEKRFIEDMAALNVTSVNYFARATDHIE 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           +++  IQ +I  G+AY     + F+ +   +YG  S RK+++ +   R+     KK+P D
Sbjct: 113 EILDQIQRLIDKGYAYVTETGVYFEVAKFEDYGKLSNRKLEDLETH-RIDIDSSKKSPHD 171

Query: 191 FILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           F LWK         EP W+SPWG+GRPGWHIE +A++  Y G  +DIHGGGLDLIFPHH+
Sbjct: 172 FALWKNREAPEYAGEPVWDSPWGKGRPGWHIEDTAITEKYFGPQYDIHGGGLDLIFPHHD 231

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           +EIAQ       E     W+H GFLN+ G KMSKS GNFITI ELL       + +    
Sbjct: 232 SEIAQMEAVSGKEPLVQYWMHTGFLNVSGEKMSKSLGNFITIRELL-------KEYSGDT 284

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------------- 346
            RL +L+THYR PIDF+   L +AE  +S+      +                       
Sbjct: 285 FRLFVLLTHYRSPIDFSEVSLHQAERNVSRIKNYLENLDEKINDIFEKGNLSEDLLKLAE 344

Query: 347 ------------ID-------------PAVLSALYNDLNTVSAIQALHKLARESTKN--- 378
                        D                 +++ +D +T  AI A+    ++S K+   
Sbjct: 345 LEENEFDEELINFDYFKSNYPALKEGVNEFFTSMDDDFSTPKAIAAIFSFIKQSNKDLEE 404

Query: 379 -----HDLLPI---FNASAHILGIEVC--KEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
                 DLL I   F   + ILGI+    K+  + N +  ++ +   RL L   KK+  +
Sbjct: 405 DDLIIDDLLAIKHWFKDISQILGIDFFVYKDETSGNEAELLDIIADVRLKLRAEKKYDLS 464

Query: 429 DYIRKQLESKGFILED 444
           D IR +L S G  + D
Sbjct: 465 DEIRDKLISLGIEVSD 480


>gi|309777271|ref|ZP_07672233.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914951|gb|EFP60729.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 446

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 156/466 (33%), Positives = 238/466 (51%), Gaps = 50/466 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N++ +K+ EF+ +    + MYVCGPTVY++ HIGNARP++VFD L R  +      
Sbjct: 2   MKLFNSMNQKVEEFKPLHEHEVHMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAIGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TD+DDKII+ A++         + + IT K    + KD   L  + P   PR
Sbjct: 61  -VKMVSNYTDVDDKIIKVAKEC------GVSEADITEKFIDAYNKDRLSLHAMMPDAAPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  +  +I  I+ ++  G+AYE + ++ F  +S+ +YG  S +++++  +G R+ E   
Sbjct: 114 VTETMDAIIAFIKLLVDKGNAYEIDGDVYFRVNSVESYGKLSNQQVEDLLVGARIDENSK 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--VFDIHGGGLDLIF 242
           K+NP DF LWK++      W+SPW  GRPGWH EC  M +         DIHGGG+DL F
Sbjct: 174 KENPLDFTLWKKTEEG-IQWDSPWSVGRPGWHTECVVMINQEFHDEHTIDIHGGGMDLKF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A      AN WIHNG +N++G KMSKS GN I   +++          
Sbjct: 233 PHHENEIAQSRAAY-DSPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIAKIG------ 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPA-------- 350
              V+R  ML  HYR P++   + +  A+  L++      Q      + D A        
Sbjct: 286 -GNVLRWVMLSAHYRAPLNINEEAIETAKKELNRVATAMKQAYVKLNLADVAVAEAYDET 344

Query: 351 ----VLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNASAHILGIE 395
                L A+ +DLNT +A  A+ +  +           +      LL        +LGI+
Sbjct: 345 QLAPFLDAMQDDLNTPNAFAAVFETVKVLNQTLRQRDADLNAVAALLHTLEKMMEVLGID 404

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           + +      +    ++L +     +K K F++AD  R QL  KG +
Sbjct: 405 IPRL----TMCEEDKQLHKLWKAAVKEKDFATADQYRAQLIEKGIL 446


>gi|219851792|ref|YP_002466224.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219546051|gb|ACL16501.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 419

 Score =  468 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 162/446 (36%), Positives = 246/446 (55%), Gaps = 32/446 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL R +     ++P+ + M+VCGPTVYD++H+G+AR  +VFDVL + LR+    K
Sbjct: 1   MELYSTLLRTVEPLVTLNPNRVSMFVCGPTVYDYSHLGHARTYVVFDVLAKYLRWTG--K 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII RA  E      N +   ++ +   ++++D   L   + ++  R
Sbjct: 59  EVFYLQNITDVDDKIINRANAE------NVSQHDLSRRFEIEYLRDMRALGVDSVSYYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I  ++ +I  G AY     + F+  +  + G  S +   +    +R+ ++  
Sbjct: 113 ATTHIPEIINQVERLISRGAAYVTEGGVYFNVGTFEHNGELSHQHGTD--RVSRITDET- 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DF LWK     E  W+SPWGRGRPGWHIE +A+S  Y G+ +DIHGGGLDLIFPH
Sbjct: 170 KQNSLDFALWKLGEFGEYTWDSPWGRGRPGWHIEDTAISEKYFGQQYDIHGGGLDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ    +        W+H GFL ++G KMSKS GNFITI + L       ++W  
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWLHTGFLTVKGEKMSKSLGNFITIRDAL-------KTWNK 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----AVLSALYNDLN 360
            V+R  +L++HY  P+  T + L  A   L      +      +P    A   A+ +DLN
Sbjct: 283 DVLRYFILLSHYSSPLQATDEGLDNAARALEHIRAVAQKDTGENPEGRKAFTDAMESDLN 342

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T +A+ A+  LA     + D+L        ILGI   +E      S  +  L + R  L 
Sbjct: 343 TPNALAAIQTLA----ASGDILA-LKEFGEILGINFLRE-----TSAPLSILQEIRAELR 392

Query: 421 KMKKFSSADYIRKQLESKGFILEDYK 446
             K+F+ AD IR+++ + G  + D  
Sbjct: 393 ANKQFAVADMIRERMVAAGITITDAP 418


>gi|225873812|ref|YP_002755271.1| cysteine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225791240|gb|ACO31330.1| cysteine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 491

 Score =  468 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 175/511 (34%), Positives = 236/511 (46%), Gaps = 76/511 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL  +I      D    RMY CGPTVYD+ HIGN R     DVL R L+      
Sbjct: 2   IRLFNTLSGQIEALTPADGQTFRMYACGPTVYDYGHIGNFRTFCHVDVLRRALQLEG--I 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+DDKII  A            I+  T K  Q F +D   L    P    R
Sbjct: 60  TVRHVMNVTDVDDKIIRNA------TRAGVPIAEYTKKYEQAFFEDLHALGVAEPEVIAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT HIP M+ LI+ +     AY+  +    F  +   +YG  S++ +     G RV  ++
Sbjct: 114 ATEHIPAMVKLIEQLAAQDIAYKTEDGSWYFRIARFKDYGKLSKKDLTGISDGARVDVDE 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K +  DF LWK   P E  WE+P G GRPGWHIECSAM+  YLG+  D+HGGG DL+F
Sbjct: 174 YEKDSARDFALWKSPKPGEHFWETPLGAGRPGWHIECSAMAMEYLGESIDLHGGGEDLMF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  A  W H  FL +EGRKMSKS GNF T+ +LL       + +
Sbjct: 234 PHHENEIAQSECASH-KTFARHWFHVRFLLVEGRKMSKSEGNFYTLRDLL------LKGY 286

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------QTSTSKG 345
            A  IR+ ++   YR+ ++FT + L      + +                     ST   
Sbjct: 287 KASAIRMLLISVPYRQQLNFTFEGLAAETTAVERLRTFYQRMLTVTPATEKNAALSTETE 346

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI--- 391
                  + L NDLNT  A  A+  L R      D           +L +      +   
Sbjct: 347 KARKEFRAGLENDLNTAEARAAIFDLVRAGNAAADAGTLSTENVAEILAVLREFDSVFNV 406

Query: 392 ----------LGIEVCKEH--LNKNI----------SIAIEKLVQERLILLKMKKFSSAD 429
                       +E  ++   LN+               I+ LV ER    + + F+ AD
Sbjct: 407 LEDRDAAITKFALEWAEQEGRLNEAAHEVLAQRGLSDEQIQALVDERTKAKRARNFARAD 466

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L  KG ++ED K         RWK+K
Sbjct: 467 QIRNELAEKGIVIEDSK------EGVRWKRK 491


>gi|320108591|ref|YP_004184181.1| cysteinyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319927112|gb|ADV84187.1| cysteinyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 492

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 171/511 (33%), Positives = 240/511 (46%), Gaps = 76/511 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++NTL  ++        + +RMY CGPTVYD+ HIGN R  +  DVL R       + 
Sbjct: 3   IDLFNTLGGRVEALVPQHDNELRMYCCGPTVYDYGHIGNFRTFLHVDVLRRFAALKGMK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V N+TD+DDKII  A         N  I+  T+K  + F +D   L    P    R
Sbjct: 62  -LKHVMNVTDVDDKIIRNAAA------ANMPIAEYTAKFERAFFEDMDALGVQRPEIIAR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT +I  M+ LI+ +     AY+  +    F  +  P+YG  S++  D  + G RV  ++
Sbjct: 115 ATENIGDMVTLIEKLASEDIAYKTEDGSWYFRIARFPDYGKLSKKDFDGIEDGARVDVDE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K    DF LWK   P E  W++  G GRPGWHIECSAM+  +LG  FD+H GG DL F
Sbjct: 175 YEKDAARDFALWKAVKPNEHSWDTSLGIGRPGWHIECSAMAMKHLGPTFDLHAGGEDLTF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A  +   A  W H  FL +EG+KMSKS GNF T+ +LL       + +
Sbjct: 235 PHHENEIAQSEAASHV-PLARHWFHVRFLLVEGKKMSKSEGNFYTLRDLL------LKGY 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
            A  IR  +L   YR  ++FT + LTE+   + +    +      + A            
Sbjct: 288 RASAIRFLLLSVPYRHQMNFTFEGLTESANAIDRLRTFARRLDKGEFAVGENAGLAALTT 347

Query: 351 -----VLSALYNDLNTVSAIQALHKLARESTKN--------------HDLLPIFNASAHI 391
                  +AL NDLNT  A  A+  L R +                  DLL  F++   +
Sbjct: 348 EKLRLFDAALSNDLNTAEARAAIFDLVRAANSAADTGTLLAGNVASIRDLLARFDSIFDV 407

Query: 392 L----------GIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSAD 429
           L           +   +               +      I+KLV ER +  K + F+ AD
Sbjct: 408 LTDRDQQVTRDALAWAEAEGRLGEAAPDLVASSSFSEDDIQKLVDERTLAKKQRNFARAD 467

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IRK+L  KG ++ED K+         WK+K
Sbjct: 468 AIRKELAEKGILIEDGKD------GVSWKRK 492


>gi|149175961|ref|ZP_01854578.1| cysteinyl-tRNA synthetase [Planctomyces maris DSM 8797]
 gi|148845115|gb|EDL59461.1| cysteinyl-tRNA synthetase [Planctomyces maris DSM 8797]
          Length = 518

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 166/527 (31%), Positives = 238/527 (45%), Gaps = 84/527 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYNTL RK  +FQ I P  + +Y+CGPTVY  +HIG+    ++ D + R L   Y 
Sbjct: 1   MTLRIYNTLSRKKEDFQTIKPGKVGIYLCGPTVYKHSHIGHMVGPVIIDTIARYLT--YN 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITDIDDK+I +A +      +N ++  + +  TQ +  +   +     T  
Sbjct: 59  NYDVKFVNNITDIDDKLINKAAE------LNISVEKLAADMTQDYFDNLETMGVDTITDF 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT++I  M  +IQ++I    AY  + ++ F  ++   YG  S RKI+E   GTRV   
Sbjct: 113 PKATDYIEAMQEIIQSLIDKDFAYPLDGDVYFSAAADNKYGCLSGRKIEEMIAGTRVEAN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KKNPADF LWK+S P EP W+SPWG GRPGWHIECSAMS   LG  FDIHGGGLDL+F
Sbjct: 173 DKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLN---LEGRKMSKSN--GNFITINELLETKKF 297
           PHHENE AQS C    +     W+HNG +      G+   + +  G+     +  E  K 
Sbjct: 233 PHHENERAQSECCTG-KTYVRYWVHNGLMQASDAAGKVGGQHDRHGDVAVDQQAQEADKL 291

Query: 298 GGRS-----------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
            G              P  ++RL +L THYR PI F+ + + E    +  + +   +   
Sbjct: 292 SGSKGAASVKELFAVHPPEIVRLFLLSTHYRSPIAFSDENIRETGKGIEGFYRFFETFER 351

Query: 347 I----------------------DPA------------VLSALYNDLNTVSAIQALHKLA 372
           I                      DPA             L A+ +D NT  AI  L +L 
Sbjct: 352 ITGESFYQLPTADKREQSTGLEGDPAEYFQQVSELRQRFLEAMDDDFNTGGAIGVLFELR 411

Query: 373 REST--------------------KNHDLLPIFNASAHILGIEVCKEHLNKNISI----- 407
                                               +++LG+       + N        
Sbjct: 412 STLNALIHSQNLEGEGKQNQTMVEALKTGASQLKELSNLLGVFRKAPAKDANADDDLVNQ 471

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            +E ++  R      K +  AD IR+ L +    +ED       +R 
Sbjct: 472 LMELVLDIRKDARANKNWDIADKIREGLAACQITVEDRPEGSLWRRG 518


>gi|319956986|ref|YP_004168249.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419390|gb|ADV46500.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 470

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 146/491 (29%), Positives = 232/491 (47%), Gaps = 56/491 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++I++++++    F+ I P    +YVCGPTVYD AH+G+AR  + FD+L R LR    
Sbjct: 1   MQMQIFDSVKKAKVPFEPIRPGEASIYVCGPTVYDEAHLGHARSALSFDLLSRTLRSLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT  +N T          +          ++  +T    Q+++++   L       +
Sbjct: 61  K--VTLAKNFT------DIDDKIIKKINETGQSLQELTDYYIQRYLEEMAALGVRRADIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+AT  +  +  +++ +I  G AY     ++ FDT    +YG  S    DE++  +R+ E
Sbjct: 113 PKATESLDAIQAMVEGLIEKGCAYRTESGDVYFDTCKDEHYGEISHMLGDEEEARSRLCE 172

Query: 182 --KYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYL---GK-VFDIH 234
                K++P DF LWK  S   +  +++  G GRPGWHIECSAM   +    G+   DIH
Sbjct: 173 IKTGEKRHPRDFALWKACSGEGDVCFDTELGSGRPGWHIECSAMIEKHFQGNGEYTIDIH 232

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHENE AQ+ CA   E  A  W+HNGF+ ++G KMSKS GN   + + L  
Sbjct: 233 GGGADLLFPHHENEAAQTRCATGHE-IAKYWMHNGFVQIDGEKMSKSLGNSFFLKDALAI 291

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKG 345
                  +P  ++R  ++  HYR   +F    L  A+  L K  +            ++ 
Sbjct: 292 -------YPGELLRFYLIGVHYRNDFNFNEVDLQAAKKRLDKLYRLKKRLTPGKVGEAEA 344

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI 394
               A+  A+ +DLNT  A+  + ++   + +  D           LL        +LG 
Sbjct: 345 GFVQALKEAMADDLNTSKALAIVDEMVSAANEALDANPRDKVLKRTLLGNIAFIDELLGF 404

Query: 395 EVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
                +       ++     IE  + ER    K K FS AD IR +L+ KG  L D    
Sbjct: 405 GGSDPYAWFQHGVSEEERQEIEAKIAERDAAKKAKDFSKADTIRDELKEKGIALMDT--- 461

Query: 449 DNGQRMTRWKQ 459
                 T+W++
Sbjct: 462 ---PEGTKWEK 469


>gi|145222038|ref|YP_001132716.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|187631640|sp|A4T5K9|SYC_MYCGI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|145214524|gb|ABP43928.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 467

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 156/478 (32%), Positives = 227/478 (47%), Gaps = 50/478 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL   + +F  + P ++ +Y+CG TV    HIG+ R  + FDVL R L     + 
Sbjct: 1   MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ +PR
Sbjct: 60  -VAFIRNVTDIDDKILIKAAD------AGRPWWEWAATYERAFTAAYDALGVLPPSAEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           AT HI QM+ LI  +I  GHAY    E N ++ F  S++P YG  S  +ID+   G  V 
Sbjct: 113 ATGHITQMVELIDRLIERGHAYCADQEGNGDVYFSVSTLPEYGKLSGHRIDDVHQGEGVA 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+DL
Sbjct: 173 --TGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDL 230

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHENEIAQ+  A      A  W+HNG++ + G KMSKS GN + I  +L+  +    
Sbjct: 231 VFPHHENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVR---- 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAV 351
              A  +R  +   HYR  ++F+   L +A    S              +   G   P  
Sbjct: 285 ---AAELRYYLGSAHYRSMLEFSENALQDAARAYSGVEDFLHRVRVRVGAVVPGEWTPKF 341

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKEHLN 402
            +AL +DL   +A+  +H    E  +  D               A   ILG +   E   
Sbjct: 342 GAALDDDLAVPAALAEVHAARAEGNRALDAGDHDAALTYAMSIRAMMGILGADPLDERWE 401

Query: 403 K---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                      + + +   V+ R      + ++ AD IR +L+  G  + D  +    
Sbjct: 402 SRDKTSAALAAVDVLVHAEVRRREDARARRDWAEADAIRDRLKEAGIEVTDTGDGPQW 459


>gi|288930998|ref|YP_003435058.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288893246|gb|ADC64783.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 467

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 162/488 (33%), Positives = 235/488 (48%), Gaps = 62/488 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIY+T+ +KI E +      +RMYVCG T YD++HIG+ R ++ FD L R L +     
Sbjct: 1   MKIYDTMSKKIVELK--LDKTVRMYVCGITAYDYSHIGHGRNIVFFDTLRRFLEFKG--H 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TD+DDKII RA      I +      +      +F KD   L        P+
Sbjct: 57  KVIFVQNFTDVDDKIIRRA------IELGKTAKEVAEFFISEFWKDAEALNYKKG-LHPK 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            T++IP++I  ++ +I  G+AYE  +    ++ F       YG  S   ++E     R+ 
Sbjct: 110 VTDYIPKIIEFVKALIEKGYAYEVESKYGKDVYFHVPRFEKYGELSGYSVEELNRH-RIE 168

Query: 181 EKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               KK+  DF LWK +   +      ++SPWG+GRPGWHIECS MSS  LG  FDIHGG
Sbjct: 169 PDERKKDVKDFALWKSAKEEDFKAKSVYDSPWGKGRPGWHIECSVMSSELLGVPFDIHGG 228

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DLIFPHHENE AQS     +E     W+HN F+ + G KMSKS GN + I + +    
Sbjct: 229 GMDLIFPHHENERAQSYALFGVEP-VRYWVHNNFVTINGEKMSKSLGNIVRIRDAVN--- 284

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------- 346
                +   V+R  +L+ HYR P+D++ + L  A+        T  +  +          
Sbjct: 285 ----KYGGEVLRFFLLLAHYRSPLDYSEKALERAKKSYEYLLNTLRNLDMEIAYLKTFGE 340

Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASA 389
                        ++AL ND+NT  AI  +H  A E  KN                    
Sbjct: 341 RREGSVKSYMNEFVNALENDMNTPKAIAVMHNFAAEINKNLFEASLEALEKAFEELKTMG 400

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           ++ GI   K      +     +L++ER +  K + F  AD IR++   KG  L D K   
Sbjct: 401 YVFGI-FEKYTRVPVLGEEDVRLIKERELARKERDFDKADKIREKFREKGIYLVDTK--- 456

Query: 450 NGQRMTRW 457
              + TRW
Sbjct: 457 ---KGTRW 461


>gi|315446220|ref|YP_004079099.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315264523|gb|ADU01265.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 475

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 156/479 (32%), Positives = 228/479 (47%), Gaps = 50/479 (10%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+TL   + +F  + P ++ +Y+CG TV    HIG+ R  + FDVL R L     +
Sbjct: 8   GMRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD 67

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V ++RN+TDIDDKI+ +A                 +   + F      L  L P+ +P
Sbjct: 68  --VAFIRNVTDIDDKILIKAAD------AGRPWWEWAATYERAFTAAYDALGVLPPSAEP 119

Query: 124 RATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           RAT HI QM+ LI  +I  GHAY    E N ++ F  S++P+YG  S  +ID+   G  V
Sbjct: 120 RATGHITQMVELIDRLIERGHAYCADQEGNGDVYFSVSTLPDYGKLSGHRIDDVHQGEGV 179

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK + P EP W +PWGRGRPGWH EC AM   YLG  FDIH GG+D
Sbjct: 180 A--TGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMD 237

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENEIAQ+  A      A  W+HNG++ + G KMSKS GN + I  +L+  +   
Sbjct: 238 LVFPHHENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVR--- 292

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPA 350
               A  +R  +   HYR  ++F+   L +A    S              +   G   P 
Sbjct: 293 ----AAELRYYLGSAHYRSMLEFSENALQDAARAYSGVEDFLHRVRVRVGAVVPGEWTPK 348

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKEHL 401
             +AL +DL   +A+  +H    E  +  D               A   ILG +   E  
Sbjct: 349 FGAALDDDLAVPAALAEVHAARAEGNRALDAGDHDAALTHAMSIRAMMGILGADPLDERW 408

Query: 402 NK---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                       + + +   V+ R      + ++ AD IR +L+  G  + D  +    
Sbjct: 409 ESRDETSAALAAVDVLVHAEVRRREDARARRDWAEADAIRDRLKEAGIEVTDTGDGPQW 467


>gi|86742926|ref|YP_483326.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
 gi|109894901|sp|Q2J545|SYC_FRASC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|86569788|gb|ABD13597.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 524

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 154/538 (28%), Positives = 240/538 (44%), Gaps = 106/538 (19%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R L     
Sbjct: 1   MGLHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQAAPHVGHIRTALPFDLLRRWL--VQS 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + VT+V+N+TDIDDKII  A ++        ++  + ++ T+ F      L  L PT Q
Sbjct: 59  GRSVTFVQNVTDIDDKIIINADRD------GTSVWELATRQTRAFDDAYRTLGILPPTIQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI L+  ++  G+AY +   + F   +  +YG+ S ++ D  +    V  +
Sbjct: 113 PRATGHIPEMIALVSALVEGGYAYASGGSVWFRVGAFADYGALSHQRPDAMQ--PSVEAE 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVF 230

Query: 243 PHHENEIAQSCCADRIEK--------------------------TANIWIHNGFLNLEGR 276
           PHHENE AQ+ CA                                A  W+H G L   G 
Sbjct: 231 PHHENERAQTVCAATARPASNAASADSPGPGGGEPGGGEPSSGEMARYWMHVGLLTTGGT 290

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN + + + L+  +         V+R  +L  HYR  ++++ + L E+     +
Sbjct: 291 KMSKSLGNSVLVADALDAVR-------PQVLRYHLLSAHYRSTLEYSAEALAESTAAHDR 343

Query: 337 WPQTSTSK-----GIIDPAVLS-------------------------------------- 353
                 +      G  + A L+                                      
Sbjct: 344 VETFVRNALDILGGPGEAAALAADEVVSSVAGAQPTVAGARPVPVPGPGGESRLTPRRAW 403

Query: 354 -----ALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE 399
                A+ +DL    A+ AL     +  +               +     +I G++  ++
Sbjct: 404 SDFTIAMDDDLAVGRALAALFGAVSQGNQVLSKAHSRELAGWVDVTRRMLNIFGLDPHEQ 463

Query: 400 ------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                      +  A++ ++  R      + ++ AD IR +L + G I+ED       
Sbjct: 464 WPTAGAEFRPALDGAMQVVLDLRSAARARRDYAEADAIRSRLAAAGLIVEDTPEGQRW 521


>gi|223040210|ref|ZP_03610489.1| cysteinyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878571|gb|EEF13673.1| cysteinyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 462

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 160/482 (33%), Positives = 242/482 (50%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+++++RK  EF+ +    +R+YVCGPTVYD AH+G+A+  I FDVL R L     + 
Sbjct: 1   MQIFDSVKRKKVEFEPVKSDFVRIYVCGPTVYDDAHLGHAKSAISFDVLRRTLSELGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TDIDDKI+++           +++  IT +    + +D + L  L P  +P+
Sbjct: 60  -VKFVRNYTDIDDKILKK------MSESGESLKSITDRYIASYERDMSALNVLEPDVKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + +MI  I+ ++ +G AYE   + I FDT+    Y S S  K D +    RV    
Sbjct: 113 ATQTLKEMIEYIEILLKNGFAYEIKGDGIYFDTAKDAQYLSLSG-KFDTEANVARVASSD 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVF--DIHGGGLD 239
            KK+  DF+LWK     E  +ESP+GRGRPGWH EC AM   +L  G+ F  DIH GGLD
Sbjct: 172 EKKDEKDFVLWKF---DEKWYESPFGRGRPGWHTECVAMIKKHLSSGEKFEIDIHAGGLD 228

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ  CA+R +  A  W+HNGF+ +   KMSKS GN   + + LE      
Sbjct: 229 LLFPHHENEAAQCRCAER-KSLAKYWLHNGFIQVNNEKMSKSLGNSFFVKDALERNL--- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDP 349
                  +R  ++ +HYR   +F+   L  A+  L K  +            ++      
Sbjct: 285 ----GEAVRFYLISSHYRANFNFSEDDLNAAKKRLDKIYRLKKRVLGAAANLSANEKFKS 340

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             +SA+ +DLNT  A+ ++ +  R +    D           +       A +LGI    
Sbjct: 341 EFMSAMQDDLNTSKALASVDEFVRSANDELDANPKDKAKKGKIAANLELIARVLGILQID 400

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++      IE L+ +R      K +  +D IR  L + G  L D       +
Sbjct: 401 VFEYFQFGVSDEKRAYIEDLINQRNEAKAAKNYELSDKIRDMLAANGISLMDTPEGCIWE 460

Query: 453 RM 454
           ++
Sbjct: 461 KI 462


>gi|322437023|ref|YP_004219235.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321164750|gb|ADW70455.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 492

 Score =  467 bits (1202), Expect = e-129,   Method: Composition-based stats.
 Identities = 173/511 (33%), Positives = 242/511 (47%), Gaps = 76/511 (14%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  ++      D + +RMY CGPTVYD+ HIGN R  I  DVL R L+    E 
Sbjct: 3   LELFNTLGGRVESLTPADGAVLRMYACGPTVYDYGHIGNFRTFIHVDVLRRYLKQTGIE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDKII  A        +   I   T K    F +D   L    P   PR
Sbjct: 62  -VKHVMNITDVDDKIIRNAAL------LKMPIEDYTRKYEDAFFEDMAALGVERPEVLPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
           AT +I +M+ LI+ +     AY+A +    F  +   +YG  S++  +  + G RV  ++
Sbjct: 115 ATENIEEMVALIERLAEKDIAYQAEDGSWYFRIARFADYGKLSKKDFEGIEDGARVDVDE 174

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           Y K    DF LWK   P E  WE+  G GRPGWHIECSAM++ +LG  FD+H GG DL F
Sbjct: 175 YEKDAARDFALWKAVKPGEHAWETRLGPGRPGWHIECSAMATKFLGDGFDLHAGGEDLTF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A      A  W+H  FL +EGRKMSKS GNF T+ +LL       +  
Sbjct: 235 PHHENEIAQSESASGTA-FARHWMHVRFLLVEGRKMSKSEGNFYTLRDLL------LKGH 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIIDPAVL--- 352
            A  IR  ++   YR  ++FT   L E+   + +    +         +G+ +       
Sbjct: 288 RASAIRFLLMSVPYRHQLNFTFDGLIESTNAVERLRTFADRMRKGSFPEGLNEDLAAATA 347

Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI 394
                  +AL NDLNT  A  A+  L R      D           +L +      +  +
Sbjct: 348 KALAGYDAALSNDLNTAEARAAIFDLVRAGNSAADAGTVKSGNAAEILKVLERFDGVFAV 407

Query: 395 EVCKE-----------HLNKNISIA--------------IEKLVQERLILLKMKKFSSAD 429
            V ++             +  +  A              I+ LV ER    K + F+ AD
Sbjct: 408 LVDRDAEITRAALDWAEKDGRMDEAAPELVATLSFSDADIDALVAERTHAKKTRNFARAD 467

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +R +L +KG +LED K+        RWK+K
Sbjct: 468 AVRNELLAKGILLEDTKD------GVRWKRK 492


>gi|297619138|ref|YP_003707243.1| cysteinyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378115|gb|ADI36270.1| cysteinyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 559

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 160/550 (29%), Positives = 239/550 (43%), Gaps = 119/550 (21%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+YN+L   + +F+ ++   ++MY+CGPTVYD +H+G+ R  + FDV+ R L +     
Sbjct: 29  IKVYNSLTNTMEKFRPLEQKAVKMYICGPTVYDSSHLGHGRTYVSFDVIKRYLEHKGYN- 87

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDDKII +A+       +      ++ +N   F+KD   L        P+
Sbjct: 88  -VYLVINFTDIDDKIINKAKN------LKVDCKNVSEENIASFLKDMLSLGVEPANVYPK 140

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---- 180
            T  I ++I  I  ++   +AY A + + F+      YG  S   +D+ K  ++      
Sbjct: 141 VTQSISEIIDFIGVLVEKDYAYIAKDGVYFNVRKFRQYGRLSNINLDKLKPKSKEAQNNN 200

Query: 181 -----------EKYHKKNPADFILWKRSTP-------MEPGWESPWGRGRPGWHIECSAM 222
                      +K  K N  DF LWK + P       +EP W SPWG+GRPGWHIECS M
Sbjct: 201 ENNNENNNENKDKNGKLNVEDFALWKFNEPVFDGDTCIEPAWNSPWGKGRPGWHIECSVM 260

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S+ Y G+ FDIHGGG DL FPHHENEIAQS            W+H GF+ + G KMSKS 
Sbjct: 261 SAKYFGECFDIHGGGKDLAFPHHENEIAQSDSYF-EAPCVKYWMHTGFVRVNGEKMSKSL 319

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-- 340
           GNF+TI ++L       + +    +RL  +  HYR P+D++ + L+  +  L+K+     
Sbjct: 320 GNFVTIEDML-------KKYDKDTLRLFFIQRHYRSPLDYSDESLSHVKNTLNKFENAIK 372

Query: 341 -----------STSKGIIDPAV-----------LSALYNDLNTVSAIQALHKLARESTKN 378
                           + D                A+ +D NTV A++ L+ L   + K 
Sbjct: 373 KLIYYSKNSEVKNKLTVNDVEFMNILYTCRNKYYDAMDDDFNTVEAVRVLNSLVGATNKY 432

Query: 379 HD-----------------LLPIFNASAHILGI--------------------------- 394
                               L  +     + GI                           
Sbjct: 433 MAELDNLENSNANTAIIIQALEFYRDVGEVFGIFGDLKIDCYLNCLKRYGYQEEVKESAV 492

Query: 395 ---EVCKEHLNKNISIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              ++    +     + I+ L    ++ R  L   K +  AD IR  LE    +LED   
Sbjct: 493 CMDKILNTEIGFADGVKIDGLMNLILELREELRDNKNYEMADKIRDNLEKLDILLEDN-- 550

Query: 448 PDNGQRMTRW 457
                + TRW
Sbjct: 551 ----PKGTRW 556


>gi|187251570|ref|YP_001876052.1| cysteinyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971730|gb|ACC98715.1| Cysteinyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 460

 Score =  467 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 149/465 (32%), Positives = 227/465 (48%), Gaps = 30/465 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L ++  +   I+     MY CGPTVY++AHIGN R  I  D+L R LR    E 
Sbjct: 1   MQLYNSLTKEKEKIVPINVDYATMYACGPTVYNYAHIGNLRTYIFEDILVRALRL---EM 57

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V +V N+TD+     D      + E  +     +   I     ++F +D   L C+ P+
Sbjct: 58  PVKHVMNVTDVGHLTSDGDSGDDKMELGAAREGKSAWDIAKFYEKKFFEDFDSLNCVRPS 117

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-IDEQKMGTRV 179
              RAT HI +MI L+  +   G  Y+ ++ I +DTS   +Y        I   K G RV
Sbjct: 118 VISRATEHIKEMIELVSILEQKGFTYKTSDGIYYDTSKFSHYHDLVGASHISGLKSGARV 177

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+NP+DF LWK S      +  W+SPWG G PGWHIECSAM+  YLG   DIH G
Sbjct: 178 EFNTEKRNPSDFALWKFSPKDKKRQMEWDSPWGTGFPGWHIECSAMAMKYLGPTIDIHCG 237

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D +  HH NEIAQS  A   ++    W+H  FL L   KMSKS+G F+T++ L E   
Sbjct: 238 GIDHVAIHHTNEIAQSEAATG-KQYVRYWVHGEFLVLHAGKMSKSDGTFLTLDALKE--- 293

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPA---- 350
              + +     R   L  HYR  ++FT + L  A+  L      + +   G++D A    
Sbjct: 294 ---KGYKPLDYRYLCLGAHYRTQLEFTFESLDFAKASLKGLRDRAKALKDGVVDEAQVEE 350

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK--EHLNKN 404
                 +AL +DLNT   +  + +  + +  +         +  +  +++ K  +     
Sbjct: 351 FKAKFAAALKDDLNTSKGLAVIWETLKSNAADGTKKEFLKYTEFVFALDLFKVEKEAGVE 410

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           I   ++ L+ ER    K K F  +D +R ++ + GFI++D     
Sbjct: 411 IPAEVQSLLDERANARKEKDFKKSDELRDKINTLGFIVKDTPQGQ 455


>gi|302348041|ref|YP_003815679.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328453|gb|ADL18648.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 476

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 167/498 (33%), Positives = 237/498 (47%), Gaps = 65/498 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + NTL R+   F+   P  + MYVCGPTVYD+ HIG+A+  + FD + R L     
Sbjct: 1   MTLTVTNTLGRREEVFRPWSPPLVTMYVCGPTVYDYVHIGHAKTFVAFDGIKRYLSLIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V+NITDIDDKII+RA           +   +     Q +++  +RL        
Sbjct: 61  --SVYHVQNITDIDDKIIKRASDR------GVSWKEVADSYAQDYLESLSRLNI-RVDLH 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PR T+HI ++I  I  +I  G+AY A +  + FD  + P+YG  S    ++         
Sbjct: 112 PRVTSHINEIIDFIGKLIEKGYAYVAPSGSVYFDVDAYPDYGRLSG-NFNKALWDQGEGV 170

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++P DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG   DIHGGG DLI
Sbjct: 171 VSEKRHPYDFALWKAAKPGEPWWESPWGRGRPGWHIECSVMSSRYLGSRIDIHGGGSDLI 230

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQS            W+H G L + G KMSKS GN +++ + +         
Sbjct: 231 FPHHENERAQSESLFGG-PWVKYWLHTGMLTIRGEKMSKSLGNIVSLRDAIN-------E 282

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------KGI 346
           W   VIR+ +L +HYR  ++++ Q L +A+ L+ +    ++                   
Sbjct: 283 WGPNVIRMWVLTSHYRGSLEYSEQSLGQAKKLVERLRDIASDVVKRLSKEEYVNYMKAAD 342

Query: 347 IDPAV---------LSALYNDLNTVSAIQALHKLARE------STKNHDLLPI------- 384
           +D             +A+  D N   A  ++  L  E      S+++  L+         
Sbjct: 343 VDELFKLRSLYLNWHAAMQRDFNMGEAAGSVWALTSEYYKYIASSESRALIAFTYKMLVD 402

Query: 385 FNASAHILGIEVCK---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           FN    +L     +     +       I+ LV+ R  L K K +  ADYIR +L S G  
Sbjct: 403 FNRVYAVLDDIFERAPMAPVASLEDQLIDLLVEVRSQLRKNKMYDLADYIRSKLASYGIT 462

Query: 442 LEDYKNPDNGQRMTRWKQ 459
           L D          T WK+
Sbjct: 463 LVDK------GEETTWKR 474


>gi|196232145|ref|ZP_03131000.1| cysteinyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196223867|gb|EDY18382.1| cysteinyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 466

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 161/479 (33%), Positives = 241/479 (50%), Gaps = 52/479 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             I+++NT  R++ EF  +DP+   ++MY CGPTVY+ AHIGN R  +  D+L R L   
Sbjct: 1   MGIRLFNTYTRQLEEFTPLDPAGQQVKMYTCGPTVYNHAHIGNFRAYLFEDLLQRHLEAR 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V  V N+TD+DDK I  +R+          ++  T+     F +D   L      
Sbjct: 61  GYQ--VERVMNLTDVDDKTIRNSRE------AGRRLADFTAIYKDAFFQDVDTLRIKRAQ 112

Query: 121 HQPRATN--HIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           H P AT   +I +MI +IQ +   G AY+A +  + F  S  P+YG  +   +DE +   
Sbjct: 113 HFPAATEPRYIERMISMIQQLESQGIAYQAEDKSVYFRLSKFPDYGKLAHLNLDELRPSG 172

Query: 178 RVP-EKYHKKNPADFILWKR--STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+  ++Y K++  DF LWK       +  W+SPWGRGRPGWHIECSAM++  LG   DIH
Sbjct: 173 RIANDEYEKESIGDFALWKAWDEKDGDVAWDSPWGRGRPGWHIECSAMATALLGPEIDIH 232

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+D IFPHHE EIAQS C    +K    W+H   L ++G+KMSK  GNF T+ +L+E 
Sbjct: 233 CGGVDNIFPHHEAEIAQSECCTG-KKFVRYWLHCAHLMVDGQKMSKKLGNFYTLRDLIE- 290

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------T 340
                + +     R A+L  +YR P++FT+  L  A   L++  +              T
Sbjct: 291 -----KGFTGREARYALLTVNYRLPLNFTLPGLESARASLARIDEWVDRLTAHAAGASPT 345

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
           +T          +AL  DLN   A+  L  L RES    +           LL  +    
Sbjct: 346 ATPLSDFTEKFFAALDEDLNISGALAPLFDLIRESNSALNRSELSPAEAAQLLADWRRID 405

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            +LG     E     I   +  LV++R      K++  +D +R ++ +KG++++D K  
Sbjct: 406 SVLGF----EREAAAIPADVLALVEQRQQARADKEWKKSDELRDEILAKGWVVKDTKEG 460


>gi|108563291|ref|YP_627607.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373736|sp|Q1CSY9|SYC_HELPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|107837064|gb|ABF84933.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 465

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+++I+ ++    AY  +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 SDLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLENMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L ++   L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADRIREELLNRKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|326383076|ref|ZP_08204765.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198212|gb|EGD55397.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 464

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 154/477 (32%), Positives = 234/477 (49%), Gaps = 46/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y++  R++ +F  + P    +Y+CG TV    HIG+ R  I FDVL R L Y   
Sbjct: 1   MTLRLYDSATREVRDFVPLRPGTASVYLCGATVQGVPHIGHVRSGIAFDVLRRWLDYRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRN+TDIDDKI+ +A +               + + ++F +    L  L P+ +
Sbjct: 61  D--VLFVRNVTDIDDKILTKAAE------AGRPWWEWAATHEREFTRAYDALGVLPPSAE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT  I QM+  +Q +I  GHAY ++  + FD  S+P YGS S  ++++   G      
Sbjct: 113 PRATGFITQMVEYMQRLIERGHAYSSDGNVYFDVRSLPEYGSLSGHRLEDVHQGESA--G 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++  LG  FDIH GG+DLIF
Sbjct: 171 TGKRDPRDFTLWKAAKPGEPAWPTPWGDGRPGWHLECSAMATSLLGAEFDIHCGGMDLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A      A  W+HNG++ + G KMSKS GN + I  +LE  +      
Sbjct: 231 PHHENEIAQSHGAGDG--FAQYWLHNGWVTMSGEKMSKSLGNVVAIPAMLERVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
            A  +R  +   HYR  ++++   L EA     +                 G ++    +
Sbjct: 283 -AVELRYYLGSAHYRSMLEYSEGALAEAAAGYRRIESFVHRVADRVGRVDVGEVNDDFAA 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN-- 402
           AL +DL   +A+ A+H   RE     +         +     A   +LG +    H    
Sbjct: 342 ALDDDLGVPAALAAVHNAVREGNTALEAGDGARALAIAAQVRAMTAVLGTDPLDPHWTAA 401

Query: 403 -------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    + + I+  +  R      K +++AD +R +L   G  + D  +     
Sbjct: 402 GADDEAHDALDVLIKAELDRRAQARAAKDWATADEVRDRLAEAGVEVTDTPDGAQWA 458


>gi|109947774|ref|YP_665002.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123362573|sp|Q17WH3|SYC_HELAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|109714995|emb|CAK00003.1| cysS [Helicobacter acinonychis str. Sheeba]
          Length = 465

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 158/487 (32%), Positives = 240/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ + P    +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MLIYDTKLKQKVPFEPLAPKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 VDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIID----P 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       S G ID     
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGSLGNIDLNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L  + +DLN   A+  L  +     +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFVEELLGIGFKN 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  + ++    IEK ++ER    + K F  AD IR++L +    L D        
Sbjct: 403 PTEYFQLGVKESEKQEIEKKIEERKRAKEQKDFIKADSIREELLNHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTTWEK 463


>gi|228919040|ref|ZP_04082419.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228956531|ref|ZP_04118327.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229040995|ref|ZP_04189758.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229107776|ref|ZP_04237412.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229125607|ref|ZP_04254639.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229142896|ref|ZP_04271337.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229148499|ref|ZP_04276755.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296500924|ref|YP_003662624.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228634915|gb|EEK91488.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228640517|gb|EEK96906.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228657799|gb|EEL13605.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228675625|gb|EEL30833.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228727292|gb|EEL78486.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228803096|gb|EEM49918.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228840565|gb|EEM85827.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|296321976|gb|ADH04904.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 420

 Score =  466 bits (1199), Expect = e-129,   Method: Composition-based stats.
 Identities = 147/444 (33%), Positives = 216/444 (48%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +           
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 341 --------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ KE L       +    Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419


>gi|210135076|ref|YP_002301515.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
 gi|226710843|sp|B6JMA7|SYC_HELP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|210133044|gb|ACJ08035.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 465

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 240/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKSKQKVPFEPLVQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN--SSVEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI V  
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGVKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L +    L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|284040387|ref|YP_003390317.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
 gi|283819680|gb|ADB41518.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
          Length = 499

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 151/502 (30%), Positives = 229/502 (45%), Gaps = 59/502 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++YNTL RK   F A++   + MYVCGPTVY++ H+GN R  + FD LYR L +   
Sbjct: 2   QPLQLYNTLSRKKEPFVALNAPYVGMYVCGPTVYNYVHLGNVRTFLTFDTLYRYLTFIGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRN+TD+   + +    E     +          I  + T  F     +     
Sbjct: 62  K--VRYVRNLTDVGHLVGDGDDGEDKIGRMAKLEKVEPMEIVQRFTNDFHTVMAQFNTFP 119

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQK 174
           P+ +P AT H+ + I  +Q ++ +G AYE+N  + FD  +      NYG  S R +D+  
Sbjct: 120 PSIEPTATGHMVEQIEAVQTLLANGLAYESNGSVYFDIDTYNKRGGNYGKLSGRILDDLL 179

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K++P DF +WKR+ P     W SPWG G PGWH+EC+ MS+ YLGK FD
Sbjct: 180 NETRELDGQSEKRSPLDFAIWKRAAPEHLMRWNSPWGEGFPGWHLECTCMSTKYLGKQFD 239

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ      ++     W+H+  L + G+KMSKS GN     EL 
Sbjct: 240 IHGGGMDLKFPHHECEIAQGDGLTGVDP-VRYWMHSNMLTVNGQKMSKSLGNSFLPAELF 298

Query: 293 E-TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
             +     + +    +R  ML +HYR  +DF+   L  A+    +               
Sbjct: 299 AGSHPLLDQPYSPMTVRFFMLQSHYRSTLDFSNDALKAAQKGYRRLANGLRVIKTLSYPS 358

Query: 341 ---STSKGIIDPA-----------VLSALYNDLNTVSAIQALHKLAR------------- 373
              + +   +D A              A+ +DLNT  AI  L  L +             
Sbjct: 359 DAEAENGVAVDEAKQKEIQKAVQQFYDAMNDDLNTAVAIAQLFTLLKYVNMLYLNQLQAA 418

Query: 374 ---ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
              E T N            +LG+              +E L+       + +++   D 
Sbjct: 419 VLGEETFNLLKESFVTFMQDVLGLL----EEGATNQPVLEGLLTLYKEYKEQRQYDKVDQ 474

Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
           IR   +++G  ++D K+  +  
Sbjct: 475 IRSYFKAQGLAIKDMKHQIDWA 496


>gi|296453539|ref|YP_003660682.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
 gi|296182970|gb|ADG99851.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
           JDM301]
          Length = 546

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 161/541 (29%), Positives = 236/541 (43%), Gaps = 106/541 (19%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R       
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A                     ++F +    L  L PT +
Sbjct: 89  K--VTFVRNVTDIDDKILDKAAAAGQRWWAR------AYYYEREFTEAYNTLGVLPPTVE 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK----ID 171
           PRAT H+  MI LIQ I+ +GH Y            + FD +S P+YG  + +K    +D
Sbjct: 141 PRATGHMSDMIDLIQRILDNGHGYVVTDANGKPTGNVYFDVASWPHYGELTHQKQTSEVD 200

Query: 172 E-----QKMGTRVPEK--------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
           E      +MG  V                   K +P DF LWK     +P    W +P+G
Sbjct: 201 EAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFG 260

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+ 
Sbjct: 261 VGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAA--GYPSAARWMHSA 318

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 319 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 371

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                      + S   +    ++A+ +D+N   A  A+   
Sbjct: 372 AQAAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFTA 431

Query: 372 ARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL-----------NK 403
            R                       + L    A    LG++   E               
Sbjct: 432 IRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGGAADGTAES 491

Query: 404 NISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               A+E L+ E    R    K K F+ AD IR  L   G  +ED      G + + W  
Sbjct: 492 PEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGSTWSL 545

Query: 460 K 460
           K
Sbjct: 546 K 546


>gi|326773069|ref|ZP_08232353.1| cysteine--tRNA ligase [Actinomyces viscosus C505]
 gi|326637701|gb|EGE38603.1| cysteine--tRNA ligase [Actinomyces viscosus C505]
          Length = 530

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 156/514 (30%), Positives = 238/514 (46%), Gaps = 82/514 (15%)

Query: 5   IKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++Y++  R I        P  + +Y+CG TV    HIG+ R  I FDVL R L     E
Sbjct: 29  LRLYDSAARAIVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLERCGQE 88

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  +RN+TDIDDKI+ ++    P +P          +  ++F      L   APT++P
Sbjct: 89  --VRLIRNVTDIDDKILSKSAAAEPPVPW----WAWAQRFEREFDAAYRALGVDAPTYEP 142

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQ-----KMGT 177
           RAT HIP+MI L+Q ++  GHAY      + +D  S+P YGS + +++++      +   
Sbjct: 143 RATGHIPEMIDLVQRLLDAGHAYVGESGNVYYDVRSLPGYGSLTNQRLEDLATTEDESQL 202

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
               +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG+ FDIH
Sbjct: 203 DDDVEADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRPGWHLECSAMSRRYLGETFDIH 262

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + + ELL  
Sbjct: 263 GGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTIKGEKMSKSLGNSLVVAELL-- 318

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------- 337
                + + A V+RLA+   H+R  ++F+ + L +A  L  +                  
Sbjct: 319 -----KRYDAAVLRLALGTVHHRSTVEFSEETLADAAALWERLSGAILRAYEFCDGGDAN 373

Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------- 383
               P        +     +A+  DLN   A+  +H   +                    
Sbjct: 374 PVDAPAEQVRARALPAEFTAAMDEDLNLAGAMAVIHATLKALNVALTQAAPSGGQGADDA 433

Query: 384 ----------IFNASAHILGIEVCKEHLN----------------KNISIAIEKLVQERL 417
                        +   +LG++   E                   + +   I   ++ER 
Sbjct: 434 LRASVTGLALDLRSQLDVLGLDPLSEPWRTRVLDGAGSSQGGAAMEALDRLIRHDLEERA 493

Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                K ++ AD +R +L   G ++ED  +    
Sbjct: 494 QARAAKDWARADALRDKLTGAGVVVEDSPSGARW 527


>gi|315586833|gb|ADU41214.1| cysteine--tRNA ligase [Helicobacter pylori 35A]
          Length = 465

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 158/487 (32%), Positives = 240/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  MI +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMIGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IEK ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIEKKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|299135529|ref|ZP_07028713.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298601653|gb|EFI57807.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 494

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 178/513 (34%), Positives = 245/513 (47%), Gaps = 78/513 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  KI    A D   +R Y CGPTVYD+ HIGN R  +  D+L R  R Y    
Sbjct: 3   LELFNTLSGKIEPLFASDGHALRFYCCGPTVYDYGHIGNFRTFLHVDMLRRTARLYGMG- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V NITD+DDKII  A      I         T+K  + F +D   L    P    R
Sbjct: 62  -LHHVMNITDVDDKIIRNAGNAGLPIG------EYTAKFERAFFEDMDALGVERPEQIAR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I  M+ LI+ +     AY+A +    F  +  P YG  S++  +  + G RV    
Sbjct: 115 ATENIGDMVTLIERLAAQDIAYKAEDGSWYFRIARFPEYGKLSKKDFEGIEDGARVDVDE 174

Query: 184 HKKNPA-DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           + K+ A DF LWK + P E  W++  G+GRPGWHIECSAM+  YLG  FD+H GG DL+F
Sbjct: 175 YDKDAARDFALWKATKPGETSWDTALGKGRPGWHIECSAMAMKYLGDSFDLHAGGEDLMF 234

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS CA   +  A  W H  FL +EG+KMSKS GNF T+ +LL       +  
Sbjct: 235 PHHENEIAQSECATH-QPFARHWFHVRFLLVEGKKMSKSEGNFYTLRDLL------LKGH 287

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------------WPQTSTSKGII--- 347
            A  IR  +L   YR  ++FT   LTE+   + +            WP+++ +   +   
Sbjct: 288 RASAIRFLLLSVPYRHQLNFTFDGLTESTNAVERLRTFYARIRDGKWPESAPADDSVASA 347

Query: 348 ----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNASA 389
               D    +AL NDLNT  A  A+  + R      D              LL  F++  
Sbjct: 348 IRLGDEKFTAALGNDLNTAEARAAIFDVLRAVNSAADQSKLVRTDADAMLTLLAKFDSIF 407

Query: 390 HILG-------------------IEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSS 427
            +L                    +      L   +      I+ LV ER +  K + F+ 
Sbjct: 408 AVLEDHDAELTRAAIAWAESEGRLGEADASLLATLSLSDADIDALVAERTLAKKQRNFAR 467

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           AD +R +L  KG ILED K+        RWK+K
Sbjct: 468 ADAVRNELLEKGIILEDSKD------GVRWKRK 494


>gi|283769304|ref|ZP_06342204.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104080|gb|EFC05463.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
          Length = 443

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 160/464 (34%), Positives = 232/464 (50%), Gaps = 48/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT   +I EF+      + +YVCGPTVY++AHIGNARPM+VFDVL R+      + 
Sbjct: 1   MKLYNTKTLEIEEFKPRKEGEVSLYVCGPTVYNYAHIGNARPMVVFDVLKRVFEAIGLK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII +A +E        +   I ++  Q +     +L    P H PR
Sbjct: 60  -VNYVSNYTDVDDKIIHKALEE------GVSEEEIANRYIQAYEDLRKQLNIEQPDHCPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  +I  I+ +   GHAYE N ++ F   S+  YGS S + ++E   G R+ E   
Sbjct: 113 VTHTMDSIISFIKGLQDQGHAYEVNGDVYFSVDSVSEYGSLSHQNLEELDAGNRIAENEQ 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK++      WESPWG+GRPGWH EC  M +  LG+  DIHGGGLDL FPH
Sbjct: 173 KKNPLDFTLWKKTDKG-IQWESPWGKGRPGWHTECVVMINENLGQTIDIHGGGLDLKFPH 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ       E  A+ W+HN  +N++G KMSKS GN +   ++        +    
Sbjct: 232 HENEAAQQRAMFGHE-LADHWMHNAMVNIDGEKMSKSLGNTLWAMDV-------TKELGT 283

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDPA---------- 350
            + R  +   HYR+ ++F+ + +  A+  L K        +      D            
Sbjct: 284 NLTRWLISSVHYRKELNFSDETIQAAKTELEKILMAVHNATLKVKFADVEWNFSVDTPSF 343

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVC 397
              +  + NDLNT +A   + +  +E   +             L+        +LGI++ 
Sbjct: 344 DRFIKQMENDLNTPNAYTVIFETVKELNASIRQKEPDYTRIMGLVNSIEKMMDVLGIKLE 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K      +S   +++ Q  L   K + F  AD  R  L+ KG I
Sbjct: 404 K----VVVSKEDKQIYQAWLAAKKERNFDQADQYRNILQEKGLI 443


>gi|307637574|gb|ADN80024.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996165|gb|ADZ51570.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325997761|gb|ADZ49969.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 465

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN--SSVEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L +    L D        
Sbjct: 403 PSAYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|229176690|ref|ZP_04304094.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228606733|gb|EEK64150.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 420

 Score =  465 bits (1196), Expect = e-129,   Method: Composition-based stats.
 Identities = 147/444 (33%), Positives = 217/444 (48%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIKFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +      +    
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLSEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ KE L       +    Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419


>gi|307720859|ref|YP_003891999.1| cysteinyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978952|gb|ADN08987.1| cysteinyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 466

 Score =  465 bits (1196), Expect = e-128,   Method: Composition-based stats.
 Identities = 163/487 (33%), Positives = 248/487 (50%), Gaps = 54/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I++++++   +F  +    + +YVCGPTVYD AH+G+A+  +VFD+L R+LR    + 
Sbjct: 1   MHIFDSVQKTKRKFTPLKEGKVSLYVCGPTVYDDAHLGHAKSALVFDLLTRVLRANGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITDIDDKII++A ++   I        IT   T+ F  +   +    PT +P+
Sbjct: 60  -VTYARNITDIDDKIIKKAIEQKKEI------KEITDFYTETFHTEMEAIGVKRPTIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+ +  M+ LIQ +I  GHAY+    ++ FDT+S   Y S S R  +E+    RV    
Sbjct: 113 ATHSLEAMVDLIQKLIDKGHAYQTPEGDVYFDTASDSEYLSLSHRMQNEEDKQERVVSST 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGGL 238
           +KKN ADF LWK        + SP+G GRPGWH+ECSAM   +L         DIHGGG 
Sbjct: 173 YKKNHADFALWKSVKDNSITFSSPFGAGRPGWHLECSAMIEKHLAYRDTPFAIDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ C       +N W+HNGF+N+EG KMSKS GN   + + L      
Sbjct: 233 DLLFPHHENEAAQTRCGTN-HALSNYWMHNGFVNIEGEKMSKSLGNSFFLKDAL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDP 349
            + +   V+R  +L THYR   +F  Q L  ++  L K  +           + +     
Sbjct: 286 -KEYDGEVLRFYLLSTHYRSNFNFNTQDLAASKKRLDKLYRLKKRLFGLAPCSDETTFKK 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHILG----- 393
            +L AL +D+N  SA+  + ++   + +  D+           +        +LG     
Sbjct: 345 ELLEALNDDMNVSSALALIDEMISGANETLDISGKHKQLKRETMANLAYIEELLGFGVKN 404

Query: 394 -IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++++    I  L++ R      K F  AD +R ++ S G  L D        
Sbjct: 405 PFEYFQFGIDEDTKGKINFLIKARNGAKAEKNFELADTLRDKILSYGVNLMDT------P 458

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 459 QGTFWEK 465


>gi|329947309|ref|ZP_08294576.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
 gi|328525526|gb|EGF52570.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
          Length = 549

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 157/519 (30%), Positives = 240/519 (46%), Gaps = 84/519 (16%)

Query: 2   KKKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +  +++Y++  R +        P  + +Y+CG TV    HIG+ R  I FDVL R L   
Sbjct: 43  EPALRLYDSAARAVVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLER- 101

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            G + V  +RN+TDIDDKI+ ++    P +P          +  ++F      L   APT
Sbjct: 102 -GGQEVRLIRNVTDIDDKILSKSAAAEPPVPW----WAWAQRFEREFDAAYRALGVAAPT 156

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQ-----K 174
           ++PRAT HIP+MI L+Q ++  GHAY      + +D  S+P YGS + +++++      +
Sbjct: 157 YEPRATGHIPEMIDLVQRLLDAGHAYIGESGNVYYDVRSLPGYGSLTNQRLEDLATTEDE 216

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVF 231
                  +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECS MS  YLG  F
Sbjct: 217 SQLDDDVEADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRPGWHLECSTMSRRYLGDTF 276

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + + EL
Sbjct: 277 DIHGGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTIKGEKMSKSLGNSLVVAEL 334

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------- 337
           L       + + A V+RLA+   H+R  ++F+ + L +AE L  +               
Sbjct: 335 L-------KRYDAAVLRLALGTVHHRSTVEFSDETLADAEALWERLSSAILRAYEFSDDG 387

Query: 338 -------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------ 378
                  P        +     +A+  DLN   A+  +H   +                 
Sbjct: 388 GANSVDAPAAQVRARALPAEFTAAMDEDLNLAGAMAVVHATLKALNVALAKAEAGSSSSK 447

Query: 379 ----------HDLLPIFNASAHILGIEVCKEHLN----------------KNISIAIEKL 412
                      DL     +   +LG++   E                   + +   I+  
Sbjct: 448 EADADLHESVADLALDLRSQLDVLGLDPLAEPWRTHVLDGVGSSQSGTAMETLDRLIQHD 507

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           + ER      K +  AD +R +L   G ++ED  +    
Sbjct: 508 LDERARARATKDWPRADALRDKLTQAGVVVEDSPSGARW 546


>gi|300790490|ref|YP_003770781.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299800004|gb|ADJ50379.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 435

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 149/449 (33%), Positives = 227/449 (50%), Gaps = 46/449 (10%)

Query: 31  CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
           CG TV    HIG+ R ++ +DVL R L +   +  V  VRN+TDIDDKI+ +A +     
Sbjct: 2   CGATVQGVPHIGHVRGVLNYDVLRRWLVHSGLD--VLLVRNVTDIDDKILTKAAENERPW 59

Query: 91  PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
                     + + + F     +L CL P+  PRAT H+ QM+ L++ +I  GH Y A+ 
Sbjct: 60  W------EWGATHERAFETAYDQLGCLPPSINPRATGHVTQMVELMERLIESGHGYVADG 113

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
           ++ F   S   YG  S + +++ + G        K++P DF +WK + P EP W +PWG 
Sbjct: 114 DVYFSVKSFDEYGKLSGQVLEDVQQGET--PTRGKRDPRDFTMWKSAKPGEPSWPTPWGN 171

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWH+ECSAM++ YLG  FDIHGGG+DL+FPHHENE AQS      +  A  W+HN +
Sbjct: 172 GRPGWHLECSAMATAYLGAEFDIHGGGIDLVFPHHENERAQSNAV--GDAFARFWLHNAW 229

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + + G KMSKS GN ++I  +L+        + AP +R  ++  HYR  I+++   ++EA
Sbjct: 230 VTMSGEKMSKSLGNTVSIPAMLDR-------YRAPELRYYLVQPHYRSTIEYSDTAVSEA 282

Query: 331 EILLSK----WPQTSTSK----GIIDPAVLSALYNDLNTVSAIQALHKLAREST------ 376
                +      + + +     GII  A  +AL +DL T  A   +H   R+        
Sbjct: 283 AQGYRRIETFLRRAAAAGDVPVGIIPEAFANALDDDLATPQAFAVVHTTVRDGNAALDAG 342

Query: 377 ---KNHDLLPIFNASAHILGIEVCKEHLN----------KNISIAIEKLVQERLILLKMK 423
              K  +      A   +LG++      +          + +S  +E L+ ER      K
Sbjct: 343 DTSKALEFAAAVRAMTDVLGLDPLSARWSEAGGSETPTKEALSRIVEGLLAERQQARAEK 402

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            F+ AD  R +L+  G ++ED  N     
Sbjct: 403 DFARADAARDRLQQAGIVVEDTPNGPQWT 431


>gi|302873995|ref|YP_003842628.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307689757|ref|ZP_07632203.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576852|gb|ADL50864.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 472

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 159/481 (33%), Positives = 241/481 (50%), Gaps = 41/481 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K    YNTL +K+ +F   +   ++MY CGPTVY +AHIGN R  I+ D+L + L+Y   
Sbjct: 2   KDFNFYNTLTKKVEKFIPNEEGKVKMYTCGPTVYHYAHIGNLRSYIMEDILEKYLKYIGY 61

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V  V NITD+     D  +   +    +      +  I    T  F  D  +L    
Sbjct: 62  D--VKRVMNITDVGHLASDADVGEDKMLKGAKREKKTVLEIAKFYTDAFFADCKKLNIDI 119

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P     ATN I   I +I  ++   +AY A + + FDTS + +Y   S +  +E  +  R
Sbjct: 120 PEIIEPATNCIEDFINMISELLKKDYAYIAGDNVYFDTSKLDSYHVLSNQSEEELMVAVR 179

Query: 179 --VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
             V E  +K+N  DF+LW    +    E  WESPWG G PGWHIECS++S  +LG+  DI
Sbjct: 180 DDVEEDTNKRNKNDFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSSISMKHLGEYIDI 239

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+D IFPHH NEIAQS       K  N W H  +LN +  KMSKS G+F+T++ LLE
Sbjct: 240 HCGGIDNIFPHHTNEIAQSEAFVG-HKWCNYWFHIHYLNDKTGKMSKSKGDFLTVS-LLE 297

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPA 350
           +     +++   + R+  L +HYR+P+ F+ + L       +K  +       +G +D A
Sbjct: 298 S-----KNYNPLIYRMFCLQSHYRKPLVFSYEVLDNVVSAYNKLIKRVGDLKDEGELDQA 352

Query: 351 --------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK---- 398
                     + L NDLNT SA   ++ L ++   +   L +      +L I +      
Sbjct: 353 KVAEYTEQFTNFLGNDLNTASAFTVIYDLLKDDISDKTKLHLVKDFDRVLSIGLTNIDNN 412

Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             + ++K++   +   ++ER    K K F+SAD IR++L  KG +++D K        T 
Sbjct: 413 KIQEIDKDLEEFVTSKIEERNEARKRKDFASADAIRQELLDKGIVIKDSK------EGTT 466

Query: 457 W 457
           W
Sbjct: 467 W 467


>gi|308176323|ref|YP_003915729.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307743786|emb|CBT74758.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 483

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 170/492 (34%), Positives = 243/492 (49%), Gaps = 54/492 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T    + +FQ +    +++Y CG TV    H+G+ R  IVFDVL R L Y   
Sbjct: 1   MSLRFYDTKTASVRDFQPLAEGEVKLYYCGATVQGMPHVGHVRSAIVFDVLVRWLEYRGF 60

Query: 63  EKCVTYVRNITDIDDKIIERARQE-------HPSIPINDAISIITSKNTQQFVKDTTRLA 115
              VT VRN+TDIDDKI+E++                 +    +  +  Q+F +    L 
Sbjct: 61  --AVTTVRNVTDIDDKILEKSANSFAEDFEADAHYRPREEWYALAYRFEQEFARAYEALG 118

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDE 172
              PT++PRAT HI +M  LI  +I  GHAY A   + ++ FD  S   YG+ +R+KID+
Sbjct: 119 VRRPTYEPRATGHITEMHELISQLIERGHAYPAADDSGDVYFDVRSYEQYGALTRQKIDD 178

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
            +       +  KK+P DF LWK    ++P    W SPWGRGRPGWH+ECSAM+  YLG 
Sbjct: 179 MQDAPDSDPR-GKKDPRDFALWKGLKDIDPPTASWPSPWGRGRPGWHLECSAMAGKYLGS 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDIHGGGLDL FPHHENE+AQS  A      AN W+HNG +  EG KMSKS GN I+  
Sbjct: 238 EFDIHGGGLDLRFPHHENEMAQSNAAGHG--FANFWMHNGMVTYEGEKMSKSIGNTISPE 295

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
           E+L           A V+R  +    YR  +D+    LTEA   + +     ++      
Sbjct: 296 EMLALA-------DARVVRYFLGQAQYRSMLDYRPDSLTEAGAAVERIDTFISNARYRLG 348

Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
                     +  A  +A+ +DLN   A+ ALH+  R    + D          L    A
Sbjct: 349 AAAEAIAATEVPEAFGTAMDDDLNVPMALAALHETVRLGNASRDSRDDAATAKALGQVLA 408

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERL----ILLKMKKFSSADYIRKQLESKGF 440
              +LG++    H +++ S     +++LVQ +L         K ++ +D IR  L S G 
Sbjct: 409 MTQVLGLDDAGSHESQDSSAEHAALDQLVQAQLAERAKARAAKDWARSDAIRDALGSAGI 468

Query: 441 ILEDYKNPDNGQ 452
            + D  +     
Sbjct: 469 TVADSADGARWT 480


>gi|228898843|ref|ZP_04063125.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228963190|ref|ZP_04124359.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228796448|gb|EEM43887.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228860743|gb|EEN05121.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 420

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 146/444 (32%), Positives = 217/444 (48%), Gaps = 57/444 (12%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           +VFD + R L Y   +  V YV N TD+DDK+I+ A +      + + +  I  +  + +
Sbjct: 1   MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANE------LGEDVPTIADRFVEAY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
            +D T L C   T  PR T ++  +I  IQ ++  G+AYE+  ++ F T     YG  S 
Sbjct: 53  FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           + I + + G R+     K++P DF LWK +   E  WESPWG+GRPGWHIECSAM+  YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS GNFI 
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
           +++++       + +   +IR  ML  HYR PI+F+ + L      L +      +    
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284

Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
                                  A   A+ +D NT +AI  L+ +A  + +         
Sbjct: 285 MESSTDLTDHNEKWLVEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344

Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                 +        ILG+E+ +E L       +    Q+R+   K + F+ +D IR  L
Sbjct: 345 VVIEAYVKQLETLFDILGLELTQEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDL 401

Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
           + +  ILED        + TRWK+
Sbjct: 402 KGRNIILEDT------AQGTRWKR 419


>gi|78777410|ref|YP_393725.1| cysteinyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|109894960|sp|Q30R91|SYC_SULDN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|78497950|gb|ABB44490.1| cysteinyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 466

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 164/482 (34%), Positives = 246/482 (51%), Gaps = 48/482 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I+++ ++   EF   +   + +YVCGPTVYD AH+G+A+  +VFD+L R+L     E 
Sbjct: 1   MFIFDSAKKIKREFIPQEQGKVSLYVCGPTVYDDAHLGHAKSALVFDLLCRVLNANGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITDIDDKII RA+++      N  I  +T   T  + K+   L    P  +P+
Sbjct: 60  -VTYARNITDIDDKIINRAQEQ------NKTIKEVTDFYTDAYHKEMALLGISRPDIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  L+Q ++ + HAY  +  ++ FDTSS   Y + S R  DE +   RV    
Sbjct: 113 ATESLDAMYALVQKLLDNKHAYTTDDGDVYFDTSSDSKYLTLSNRVQDESEKLQRVQSSS 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
            K+NPADF LWK        + SP+G+GRPGWH+ECSAM   +L K       DIHGGG 
Sbjct: 173 QKRNPADFALWKSIHDESVTFGSPFGKGRPGWHLECSAMIEKHLSKPNAKFAVDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ CA      A  W+HNGF+N++G KMSKS GN   + + L      
Sbjct: 233 DLLFPHHENEAAQTRCAT-DHALAAYWMHNGFVNIDGEKMSKSLGNSFFLKDAL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
            + +   V+R  +L THYR   +F  + L  A+  L K  +             K     
Sbjct: 286 -KIYDGEVLRFYLLSTHYRSNFNFNEEDLATAKKRLDKIYRLKKRLFGVTYEDEKTDFKK 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L  L +DLN  +++  + ++   + +  D            L   +    ILG     
Sbjct: 345 ELLETLSDDLNISASLALIEEMITRANETLDTAGKHKELKREALSNLSFIEKILGFGIKN 404

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  +N+     I KL+++R    K K F+++D +R ++ + G  L D       +
Sbjct: 405 PYEYFQFGVNEETKTEIAKLIEKRAEAKKSKDFAASDMLRDKILAYGVNLMDTPQGSFWE 464

Query: 453 RM 454
           ++
Sbjct: 465 KI 466


>gi|23464902|ref|NP_695505.1| cysteinyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|61216350|sp|Q8G7G5|SYC_BIFLO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|23325493|gb|AAN24141.1| cysteinyl-tRNA synthetase 1 [Bifidobacterium longum NCC2705]
          Length = 546

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 161/541 (29%), Positives = 235/541 (43%), Gaps = 106/541 (19%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R       
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+ +A                     ++F +    L  L PT +
Sbjct: 89  K--VTFVRNVTDIDDKILVKAAAAGQRWWAR------AYYYEREFTEAYNTLGVLPPTVE 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK----ID 171
           PRAT H+  MI LIQ I+ +GH Y            + FD +S P+YG  + +K    +D
Sbjct: 141 PRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVD 200

Query: 172 E-----QKMGTRVPEK--------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
           E      +MG  V                   K +P DF LWK     +P    W +P+G
Sbjct: 201 EAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFG 260

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+ 
Sbjct: 261 VGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAA--GYPSAARWMHSA 318

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 319 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 371

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                      + S   +    ++A+ +D+N   A  A+   
Sbjct: 372 AQAAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFTA 431

Query: 372 ARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL-----------NK 403
            R                       + L    A    LG++   E               
Sbjct: 432 IRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGGAADGTAES 491

Query: 404 NISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               A+E L+ E    R    K K F+ AD IR  L   G  +ED      G + + W  
Sbjct: 492 PEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGSTWSL 545

Query: 460 K 460
           K
Sbjct: 546 K 546


>gi|297380086|gb|ADI34973.1| cysteinyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 465

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|32490992|ref|NP_871246.1| hypothetical protein WGLp243 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|30173143|sp|Q8D2V9|SYC_WIGBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|25166198|dbj|BAC24389.1| cysS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 463

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 157/481 (32%), Positives = 254/481 (52%), Gaps = 50/481 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL+ K  +F+ I+ + + +YVCG T YD  HIG+AR ++ FD++ +  +Y     
Sbjct: 2   MKIFNTLKNKKEKFKPINSNIVNVYVCGITPYDLCHIGHARTLVFFDIMIKYFQYKGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              Y+RNITDIDDKII +A          +  ++++    ++   D   L  + P ++PR
Sbjct: 60  RTNYIRNITDIDDKIINKA------FHKKEKYNLLSDFMIKEMKYDLNSLNIMPPNNEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPE 181
            TNHI  ++ +I+ ++   HAY +   +++FD S+  +YG  S+R  +  +     +   
Sbjct: 114 VTNHISDILEMIKILLEKKHAYISKTGDVVFDISTYRDYGKLSKRFEEKKQLLNNKKNKI 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            +  K   DF+LWK S P EP W+SPWG GRPGWHIECSA+S   LG +FDIHGGG DLI
Sbjct: 174 NFKTKKEKDFVLWKMSKPNEPSWKSPWGHGRPGWHIECSAISDKTLGNIFDIHGGGSDLI 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS CA+      N W+H G +  +  KMSKS GN   I E++       + 
Sbjct: 234 FPHHENEIAQSKCANSKFN-VNFWVHTGMVMFKKEKMSKSLGNSCLIREIV-------KK 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVL 352
           + A  ++  +  +HYR  I ++V  + +++  + +  ++  +         K       +
Sbjct: 286 YDADTLKYFLTSSHYRSQITYSVDNMEKSKSAVKRLYRSLHNTNYFYNLPIKEKFTSKFI 345

Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVC------- 397
            A+ +D NT  A   L  ++R+          K + L  +    ++I+GI          
Sbjct: 346 DAMNDDFNTPKAYSVLFSISRQINYFKNKNPEKANQLSTVLKNLSNIIGILNENPDSYLN 405

Query: 398 -KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            K   +K+    I+ ++++R    K+K++  AD  RK+L+  G  LED        + T+
Sbjct: 406 NKLKFSKDKINKIKSIIKKRENYRKLKQWEKADEERKKLKYIGVCLEDT------IQGTK 459

Query: 457 W 457
           W
Sbjct: 460 W 460


>gi|217034711|ref|ZP_03440113.1| hypothetical protein HP9810_896g8 [Helicobacter pylori 98-10]
 gi|216942824|gb|EEC22321.1| hypothetical protein HP9810_896g8 [Helicobacter pylori 98-10]
          Length = 465

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++    + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSGIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNSKNKALKGEILANLKFVEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|317011097|gb|ADU84844.1| cysteinyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 465

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 158/487 (32%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MLIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVRMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL+FPHHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 VDLLFPHHENEACQTRCTFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIID----P 349
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       S G ID     
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGSLGNIDLNFKK 342

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L  + +DLN   A+  L  +     +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFVEELLGIGFKN 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  +N++    IEK ++ER    + K F  AD IR++L      L D        
Sbjct: 403 PTEYFQLGVNESEKQEIEKKIEERKRAKEQKDFMKADSIREELLKCKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTTWEK 463


>gi|308062209|gb|ADO04097.1| cysteinyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 465

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 157/487 (32%), Positives = 241/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|298736162|ref|YP_003728688.1| Cysteinyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298355352|emb|CBI66224.1| Cysteinyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 465

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 237/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKSKQKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER      K F  AD+IR++L  +   L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKAQKDFLKADHIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|254459132|ref|ZP_05072554.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207084025|gb|EDZ61315.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 466

 Score =  463 bits (1192), Expect = e-128,   Method: Composition-based stats.
 Identities = 168/487 (34%), Positives = 244/487 (50%), Gaps = 54/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+++++   EF  +      +YVCGPTVYD +H+G+A+  +VFD+L R+L+    + 
Sbjct: 1   MYIYDSVQKTKREFTPLVEGKASLYVCGPTVYDDSHLGHAKSALVFDLLSRVLKANGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY RNITDIDDKII++A +          I  IT   T  F K+   +    P  +P+
Sbjct: 60  -VTYARNITDIDDKIIKKAAES------GKDIKEITDFYTDAFHKEMDAIGVSRPDIEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M  LIQ +I  GHAY+ +  +I FDTSS   Y S S R  DE     RV    
Sbjct: 113 ATESLDAMYELIQKLIDSGHAYKTSEGDIYFDTSSDGEYLSLSSRVQDEDDKLQRVENSL 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL---GKVF--DIHGGGL 238
            K+NPADF LWK        + SP+G GRPGWH+ECSAM   +L   G  F  DIHGGG 
Sbjct: 173 QKRNPADFALWKSVKDNTITFNSPFGEGRPGWHLECSAMIEKHLAHEGAEFAVDIHGGGA 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ+ CA      AN W+HNGF+N++G KMSKS GN   + + L      
Sbjct: 233 DLLFPHHENEAAQTRCATN-HALANYWMHNGFVNIDGEKMSKSLGNSFFLKDAL------ 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDP 349
            + +   V+R  +L THYR   +F  Q L  ++  L K  +           T       
Sbjct: 286 -KEYDGEVLRFYLLSTHYRSNFNFNTQDLATSKKRLDKIYRLKKRLFGLADCTDATPFKE 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHILGI---- 394
           ++L AL +D+N  SA+  +      + +             + +        ILG     
Sbjct: 345 SLLKALSDDMNVSSALALIEAFISSTNEVLDTAGKHKELKRETISNLAYIEKILGFGSKN 404

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +  + I  L+ +R    K K F  +D +R ++ + G  + D        
Sbjct: 405 AYEYFQFGVDAHTKLQIFDLIVKRDEAKKEKNFQESDKLRDEILAFGVNIMDT------P 458

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 459 QGTFWEK 465


>gi|261838269|gb|ACX98035.1| cysteinyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 465

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 240/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD+IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADHIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|225468584|ref|XP_002263880.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
          Length = 484

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 171/516 (33%), Positives = 248/516 (48%), Gaps = 110/516 (21%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++++YNT+ ++   F+ +    + MYVCG T YD +H+G+AR  + FDVLYR L++  
Sbjct: 4   TTELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VTYVRN TD+DDKII RA +      + +    ++S+  Q+++ D T L CL PT 
Sbjct: 64  YE--VTYVRNFTDVDDKIIRRANE------LGENPLTLSSRFCQEYLDDMTDLQCLTPTQ 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK+++ + G RV  
Sbjct: 116 QPRVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAV 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   FDIHGGG+DLI
Sbjct: 176 DSRKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLI 235

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQSC A +                              I +L          
Sbjct: 236 FPHHENEIAQSCAACQESN---------------------------ITDL---------- 258

Query: 302 WPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSKWPQTSTSKGII 347
           +    +R  +L THYR P++++               Q L + E  LS + + +     I
Sbjct: 259 YHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCI 318

Query: 348 DPA-----------VLSALYNDLNTVSAI-QALHKLARESTKNHDLL------------- 382
            PA             + + +DL+T   +  +L +  R      ++L             
Sbjct: 319 TPAAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAV 378

Query: 383 -------PIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKM 422
                          +LG+       EV ++   K +         +  L++ER +  K 
Sbjct: 379 QSLTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALARKN 438

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           K FS  D IR  L SKG  L D        + T W+
Sbjct: 439 KNFSRGDQIRADLASKGIALMDV------GKETIWR 468


>gi|308063719|gb|ADO05606.1| cysteinyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 465

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 240/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADNIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|15611885|ref|NP_223536.1| cysteinyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6831687|sp|Q9ZKW6|SYC_HELPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4155389|gb|AAD06399.1| CYSTEINYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 465

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 238/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVHNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSVEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|317180259|dbj|BAJ58045.1| cysteinyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 465

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 240/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+++      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKSKQKVPFESLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N ++  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALRGEILANLKFIEELLGIGFKN 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|320527638|ref|ZP_08028812.1| cysteinyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131959|gb|EFW24515.1| cysteinyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 444

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 163/464 (35%), Positives = 233/464 (50%), Gaps = 48/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I++YNT   +I EF+ I   ++ MYVCGPTVY++AHIGNARPMIVFDVL RL        
Sbjct: 2   IRLYNTKTLQIEEFKPIHEGHVDMYVCGPTVYNYAHIGNARPMIVFDVLKRLFEAEGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV N TD+DDKII++A +E      N   ++I  +    + +  T L    P   PR
Sbjct: 60  SVTYVSNFTDVDDKIIKKAAEE------NTTEAVIAQRYIDAYQEVRTLLNTELPDITPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  I  ++  GHAYEAN ++ F   S+P YG  S + +D+ + G R+     
Sbjct: 114 VTETMDKIIDFIDQLVKTGHAYEANGDVYFSVESVPTYGEISHQHMDQLEAGARIETNDQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK+ T M   W SPWG GRPGWH EC  M +  +G   DIHGGG+DL FPH
Sbjct: 174 KKNPYDFALWKK-TDMGIKWNSPWGEGRPGWHTECVVMINDNIGDCIDIHGGGMDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ          AN W+HN  +N++G+KMSKS GN +   +++ +          
Sbjct: 233 HENEAAQQEAMHG-NTLANYWVHNAMVNIDGQKMSKSLGNTMWAKDVVLSLGTNLT---- 287

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDP----------- 349
              R  +   HYR+ ++F+ + +  A   L K      Q      + D            
Sbjct: 288 ---RWLVSSVHYRKELNFSDETIETARKELDKVLTPLKQAYIKAALADNAMGDDYDKDSY 344

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEVC 397
            A L  L +D+NT +A   + +  ++  +      I                ++LGI V 
Sbjct: 345 RAFLDCLDDDMNTPNAYAVIFETVKKLNQTLRQREIDFAQVALYSNAVEKMLNVLGIVVD 404

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K  + +      ++L  +       K F +AD  R +L  KG +
Sbjct: 405 KPVIGEAE----KELFAKWNQAKADKDFDTADKYRNELAEKGLL 444


>gi|317178758|dbj|BAJ56546.1| cysteinyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 465

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N ++  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILKCMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKN 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|229492425|ref|ZP_04386229.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229320654|gb|EEN86471.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 466

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 162/482 (33%), Positives = 242/482 (50%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IY++  + + EF  + P+ + +YVCGPTV    HIG+ R  +V+D+  R L +     
Sbjct: 3   IRIYDSGHQALREFVPLRPARVSIYVCGPTVQSAPHIGHLRSALVYDLWRRWLTHRGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT VRN+TDIDDKI+  A +  P             +   +F +  T L  L PT++PR
Sbjct: 61  TVTLVRNVTDIDDKILALATESEPWW-------ARAYRVETEFTRAYTALGILPPTYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            + HI + + LI  ++  GHAY A+    ++ FD SS   YG+ +R+  D   + +    
Sbjct: 114 TSGHITEALALIDRLLRRGHAYVASDGSGDVYFDVSSWQTYGTLTRQNPDAL-LQSDDGH 172

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K+NP DF LWK + P EP    W SPWG GRPGWHI+CSAMS  YLG  FDIHGGG+
Sbjct: 173 RQAKQNPQDFALWKGTNPSEPKSARWPSPWGTGRPGWHIQCSAMSRRYLGPAFDIHGGGI 232

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE+AQS  A   ++ A  W+HNG + + G+KM+KS  N+++ +ELL      
Sbjct: 233 DLRFPHHENELAQSTAA--GDEFARYWVHNGLVTISGQKMAKSLDNYLSADELL------ 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------WPQTSTSKGII 347
            R      +R  +L  HYR  +D+  + LT  +  +++               +     +
Sbjct: 285 -RRVGPATLRYYLLSAHYRSALDYQEEALTYTQATVARIANFQHRARTHLEDATAGDPTL 343

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE--- 395
             A  +AL +DLN ++A+  LH   R      D               A   +LGIE   
Sbjct: 344 PGAFAAALDDDLNVLAALGVLHDHVRAGNIAVDNGETAAAAAAYQSITAMTSVLGIETES 403

Query: 396 ----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                     +  ++  +E L+  R        F +AD IR  L   G ++ED+ +    
Sbjct: 404 SPTAPRDGQHSSTVTALVEVLLANRSCARGEGDFVTADRIRGDLARSGIVIEDHSSGTTW 463

Query: 452 QR 453
            +
Sbjct: 464 TQ 465


>gi|188527712|ref|YP_001910399.1| cysteinyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|229558719|sp|B2UU37|SYC_HELPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|188143952|gb|ACD48369.1| cysteinyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 465

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADNIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|293400415|ref|ZP_06644561.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306815|gb|EFE48058.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 439

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 157/460 (34%), Positives = 230/460 (50%), Gaps = 50/460 (10%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + + I EF+ I    + MYVCGPTVY++ HIGNARP++VFD L R  +    +  V  V 
Sbjct: 1   MNQTIEEFKPIHEHEVNMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQALGYK--VKMVS 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N TD+DDKII+ A++         +   IT K  + +  D   L  + P   PR T  + 
Sbjct: 59  NYTDVDDKIIKVAKEC------GVSEKEITEKFIKAYNDDRLALHAMMPDAAPRVTETMD 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            +I  I+ ++  GHAYE + ++ F  +S+ +YG  S ++ID+  +G R+ E   K+NP D
Sbjct: 113 AIIAFIELLVKKGHAYEIDGDVYFRVNSVESYGKLSNQQIDDLMVGARIDENSKKENPLD 172

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKV-FDIHGGGLDLIFPHHENE 248
           F LWKR+      W SPW  GRPGWH EC  M +    G+   DIHGGG+DL FPHHENE
Sbjct: 173 FTLWKRTDEG-IQWNSPWSVGRPGWHTECVVMINKEFHGEHTIDIHGGGMDLKFPHHENE 231

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IAQS  A      AN WIHNG +N++G KMSKS GN I   +++E            V+R
Sbjct: 232 IAQSRAAY-ETPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIEKIG-------GNVLR 283

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPA------------VL 352
              L  HYR P++   + +  A+  L K      Q      + D               +
Sbjct: 284 WVFLSAHYRSPLNINEEAIETAKKELQKVQTSLKQAYVKLALADVEITDEAEDTLLTPFM 343

Query: 353 SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHL 401
            A+ +D+NT +A  AL +  +   +              ++        +LGIE  +  L
Sbjct: 344 DAMQDDMNTPNAFAALFETVKVLNQTIRQREVDLAFLQRIVKTVETMLDVLGIENNRLIL 403

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +       ++L  +    +K K F++AD  R +L  KG +
Sbjct: 404 SDED----KELHHKWKAAVKEKDFATADDYRARLIEKGIL 439


>gi|261211911|ref|ZP_05926198.1| cysteinyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260839261|gb|EEX65893.1| cysteinyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 364

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 133/378 (35%), Positives = 193/378 (51%), Gaps = 38/378 (10%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSF 165
              D   L    P  +PRAT +I ++I L++ +I  G AY A+  +++F+      YG  
Sbjct: 1   MYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVGKYDEYGKL 60

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
           S++ +D+ + G RV  +  K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S 
Sbjct: 61  SKQDLDQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSS 120

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            LG  FDIHGGG DL FPHHENEIAQSCCA    +  N W+H+G + ++  KMSKS GNF
Sbjct: 121 ILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGT-QYVNTWMHSGMVMVDKEKMSKSLGNF 179

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
            TI ++L         + A  +R  ++  HYR  ++++ + L +A   L +         
Sbjct: 180 FTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLD 232

Query: 346 IIDPA---------VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNAS 388
              PA           +A+ +D NT  A   L  +ARE  +           L  +    
Sbjct: 233 RSVPAAGGEEYLSRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMREL 292

Query: 389 AHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           A ++GI         +       +  IE L++ R      K +++AD  R +L   G +L
Sbjct: 293 ADVIGILHQEPESFFQGSAEDEDAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVL 352

Query: 443 EDYKNPDNGQRMTRWKQK 460
           ED      G   T W++K
Sbjct: 353 ED------GPNGTTWRRK 364


>gi|308183038|ref|YP_003927165.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065223|gb|ADO07115.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 465

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANSPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|325529638|gb|EGD06509.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 466

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 160/463 (34%), Positives = 228/463 (49%), Gaps = 26/463 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R +  F  I P  + MY CGPTVYD AHIGN R  +  D+L R+L     
Sbjct: 1   MPLELYDTWSRAVRPFTPIRPGRVGMYCCGPTVYDDAHIGNLRTYVFEDILRRVLMRNGY 60

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V +V NITD+     D      + E  S    ++   I  + T  FV+D   L  L 
Sbjct: 61  --AVRHVVNITDVGHLTSDADEGEDKMEKGSRRTGESAWAIAQRYTDAFVQDWRALNLLE 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PT   RAT+HI + I  I+ +   G+ Y  ++ + FDT    +YG  +R      + G R
Sbjct: 119 PTIWCRATDHIAEQIAFIETLERAGYVYRTDDGLYFDTRRQDDYGHLARLDRAGLQAGKR 178

Query: 179 VPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     K++  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ YLG +FDIH 
Sbjct: 179 VAMG-GKQSVTDFALWKFSRAGVKRQMEWDSPWGRGFPGWHIECSAMSAKYLGTLFDIHC 237

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLET 294
           GG D I  HH NEIAQ+  A      AN W+H  FL L+   KMSKS+G+F+ +  L E 
Sbjct: 238 GGEDHIAVHHSNEIAQTQAAHGTR-LANYWLHGHFLTLDADAKMSKSSGDFVRLQTLQE- 295

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAV 351
                R+      R   L  HYR  + FT   L  A+  L++  Q   +    G  DPA 
Sbjct: 296 -----RNIDPLAYRYLCLTAHYRSKLHFTWASLDAAQTALNRLRQLYVAWPDGGRADPAF 350

Query: 352 L----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE-HLNKNIS 406
           +    + L +DLN   A+  L +L R       L    ++   +LG+ +     ++ +I 
Sbjct: 351 VARFDAELNDDLNLPRALAVLWELVRSDLPPSTLKATVDSFDTVLGLGLRDWTAVSFDIP 410

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             +  L+  R      + ++SAD IR  L ++G+ +ED     
Sbjct: 411 EDVRVLLDARERARAERDWASADRIRDSLRAQGWRVEDTTEGQ 453


>gi|261839681|gb|ACX99446.1| cysteinyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 465

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 238/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV-- 396
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALRGEILANLKFIEELLGIGFKN 402

Query: 397 ----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                +  ++++    IE  ++ER    + K F  AD IR++L      L D        
Sbjct: 403 PSTYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREELLKHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|317009539|gb|ADU80119.1| cysteinyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 465

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 236/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|332673723|gb|AEE70540.1| cysteine--tRNA ligase [Helicobacter pylori 83]
          Length = 465

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 239/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  +++R    + K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEKRKRAKEQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|315654539|ref|ZP_07907445.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
 gi|315491003|gb|EFU80622.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
          Length = 506

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 158/501 (31%), Positives = 240/501 (47%), Gaps = 87/501 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++               + +   ++F      L  L PT  P 
Sbjct: 59  AVTYVRNVTDIDDKILAKSAAAGVPWW------ELAAHFEREFDFAYRALNTLPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQ-----KMGTR 178
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + + E      +    
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELVSTEDESQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 TATEVGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE  
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------ 337
                 W   V+R++++ THYR  ++++   L +A +L  K+                  
Sbjct: 290 ------WNPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLQQVPRSVPAGAGAP 343

Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---------E 374
                          Q   +   +    ++AL +DLN   A+ ALH+  +         +
Sbjct: 344 EVCNIYGDVEPDLARQRELTAVELPDDFVAALDDDLNVPGALPALHRALKTGKAALNSGD 403

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
           ++          A   + G++                          N +++  +  L+Q
Sbjct: 404 TSGAQQAALQLRAMLDVFGLDPHDPAWVASVSATETPGTAPSPTDTPNDSLTSLVTALLQ 463

Query: 415 ERLILLKMKKFSSADYIRKQL 435
           +R      + +  AD IR  L
Sbjct: 464 QRAEAKAQRDWGRADAIRDLL 484


>gi|15645504|ref|NP_207679.1| cysteinyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2507427|sp|P41259|SYC_HELPY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2314022|gb|AAD07934.1| cysteinyl-tRNA synthetase (cysS) [Helicobacter pylori 26695]
          Length = 465

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 238/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKERKDFLKADSIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|315605246|ref|ZP_07880292.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
 gi|315313063|gb|EFU61134.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
          Length = 486

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 155/503 (30%), Positives = 236/503 (46%), Gaps = 66/503 (13%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +Y++   +I     + P  + +Y+CG TV    H+G+ R  + FD L R LR  
Sbjct: 1   MSTMLHLYDSKSARIQPLNPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  VTYVRN+TDIDDKI+ ++ +                +  ++F +    L   APT
Sbjct: 61  GYE--VTYVRNVTDIDDKILTKSAES------GWDWWAWAYRFEREFTQAYDTLGVQAPT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK----- 174
           ++PRAT HIP  I L+  +I  GHAY +    + FD  S  +YGS +R+++ + +     
Sbjct: 113 YEPRATGHIPDQIDLVSRLIDAGHAYSDGRGNVYFDVHSQADYGSLTRQRLADMRTTEDD 172

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                  +  K++P DF LWK + P EP    WESPWGRGRPGWH+ECSAMS  YLG  F
Sbjct: 173 AQIDEAVEAGKRDPRDFALWKATKPGEPDTASWESPWGRGRPGWHLECSAMSRRYLGDEF 232

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL FPHHENE AQS  A      A +W+HN ++  +G KMSKS GN ++I  L
Sbjct: 233 DIHGGGIDLRFPHHENEQAQSHGA--GWAFARLWVHNAWVTTKGEKMSKSLGNVLSIGAL 290

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------- 337
            E         PA  +R A+   H+R  I++    L  A     K+              
Sbjct: 291 TEEH-------PAVAVRWALSTVHHRSAIEWGPDTLPAAHAAWEKFSSFVARAIEAVGEA 343

Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFN 386
              + +   G +  A ++A+ +DLN   A+  LH+  +                   +  
Sbjct: 344 GADEIALGPGDLPEAFVAAMDDDLNVAGALAVLHEHLKAGNAALAAGDADGIYREQVLVR 403

Query: 387 ASAHILGIEVCKEHLN---------------KNISIAIEKLVQERLILLKMKKFSSADYI 431
           +   +LG++   +                    +   +  +++ER      K +  AD +
Sbjct: 404 SMLDVLGLDPASQQWRGQAGIDAGGAAAGEHSALDALVGAVLEERAQARAAKDWGRADEL 463

Query: 432 RKQLESKGFILEDYKNPDNGQRM 454
           R +L + G  + D ++       
Sbjct: 464 RDRLAAAGVSVADGRDGVTWSVG 486


>gi|317177679|dbj|BAJ55468.1| cysteinyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 465

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 156/487 (32%), Positives = 238/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++    + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSGIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGIIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++ +    IE  ++ER    K K F  AD IR++L  +   L D        
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKKQKDFLKADRIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|262341324|ref|YP_003284179.1| cysteine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
 gi|262272661|gb|ACY40569.1| cysteine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
           str. Bge]
          Length = 485

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 156/483 (32%), Positives = 229/483 (47%), Gaps = 47/483 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIYN+L  K   F+ I    + +YVCGPTVY+  H+GN R  I FDV++R L++  
Sbjct: 10  RNNLKIYNSLTGKKELFKPIHEEYVGIYVCGPTVYNHLHLGNCRTFISFDVVFRYLKHLG 69

Query: 62  GEKCVTYVRNITDIDDKIIER----ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V YVRNITD+     E      +    S         I  K T  F      L   
Sbjct: 70  YK--VRYVRNITDVGHLENEENDLEDKISKKSRIEGLEPMEIVQKYTLSFHNLLNILNVQ 127

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ- 173
            P  +P AT HI + I +I+ +I    AYE N  + F+         YG  S+ KID+  
Sbjct: 128 PPNIEPTATGHIIEQIDMIEKLIAKNLAYEINGSVYFNLKEYGKLYSYGILSKNKIDKLF 187

Query: 174 --KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
             +   +     HK     F LWKR+       W SPWG+G PGWHIEC+AMS+ YLG  
Sbjct: 188 NKEFNFQEKNVIHKI----FSLWKRAHSGHIMSWNSPWGKGFPGWHIECTAMSTKYLGVT 243

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL FPHHE E+AQ+         A+ W+H   L L G+KMSKS GNF+ + +
Sbjct: 244 FDIHGGGIDLKFPHHECELAQATAIYNKSYLAHYWMHTNMLTLNGKKMSKSTGNFLILKD 303

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
           +++   F  + +   ++R  +L +HYR  +DF+ + L  AE   +K  +        DP 
Sbjct: 304 VIQ---FYKKPFSPSILRFFILQSHYRSVMDFSKEGLMNAEKGYNKIMKAINKLKNFDPN 360

Query: 350 ----------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--IFNA---- 387
                               A+ +D N    I  L K        +++    +       
Sbjct: 361 ISKKNHNVFNVYDWIKDCYKAIDDDFNIPLLISHLFKATHVINSLNEIEKSYLLKKYMTY 420

Query: 388 -SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
               ILG++  ++  N   K + I +++L++ R    K K +  +D IR++L S G    
Sbjct: 421 FVFDILGLQDQEQKTNSSEKKLKILVKRLIKFRAEARKQKNWIVSDKIREELSSIGIPFH 480

Query: 444 DYK 446
           D K
Sbjct: 481 DDK 483


>gi|317182191|dbj|BAJ59975.1| cysteinyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 465

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 236/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N ++  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +     +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|317014292|gb|ADU81728.1| cysteinyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 465

 Score =  462 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 240/487 (49%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLIHNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  +++   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKAFKE------NKSIQELSNIYIESYTRDLNALNVKQPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVSMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN--SSVEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            +       +++    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PNAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|149196426|ref|ZP_01873481.1| cysteinyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
 gi|149140687|gb|EDM29085.1| cysteinyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
          Length = 463

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 157/480 (32%), Positives = 241/480 (50%), Gaps = 53/480 (11%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           + R+   F  I+    R+Y CGPTVY++AHIGN R  +  D+L R+L+    +  VT V 
Sbjct: 1   MSREAEPFTPINEGEARLYTCGPTVYNYAHIGNFRAYVFEDLLRRVLKL--NDYKVTQVM 58

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N+TD+DDK I  +++         +++  T+   + F +D  +L      H P AT+HIP
Sbjct: 59  NLTDVDDKTIRDSQK------AGMSLNDFTAIYKKAFFEDLEKLNVEPAEHYPAATDHIP 112

Query: 131 QMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNP 188
           QMI +IQ ++  G+AY A++  + +      +YG  ++   D Q  GTRV  ++Y K++ 
Sbjct: 113 QMIDMIQTLVDKGYAYLADDKCVYYSIDKFEHYGCLAKIDRDNQMSGTRVKTDEYEKESV 172

Query: 189 ADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +DF LWK       +  W+SPWG GRPGWHIECSAM+   LG  FD+H GG+D +FPHHE
Sbjct: 173 SDFALWKAWDKADGDVKWDSPWGEGRPGWHIECSAMAKATLGDHFDMHTGGVDNMFPHHE 232

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           +EIAQS  A+  +   N W+H   L +   KMSKS GNF T+ +L E      + W    
Sbjct: 233 DEIAQSEAANGCK-YVNYWMHCAHLRINNAKMSKSLGNFYTLAQLTE------KGWAGAE 285

Query: 307 IRLAMLMTHYREPIDF-------TVQRLTEAEILLSKWP----------------QTSTS 343
           +R  +L THYR  ++F         + L+ A   +++                  + S  
Sbjct: 286 VRYMLLATHYRAGLNFVVETGAEKSESLSNARAAITRLQNFIERIKDKADGELSSELSEL 345

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
                   L +L +DLN   A+  +    RE  +  D         LL        IL  
Sbjct: 346 CAKAQDEFLDSLNDDLNISGALGKMFDFIREGNRILDSNETVNQEALLNTLKYFNRIL-- 403

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           +V K  L+ ++   I  L +ER      K +  +D IR QL+++G+++ED       ++ 
Sbjct: 404 DVMKFDLDNDVPAEILALAEERQQARADKNWGRSDEIRDQLKAQGWVIEDTPAGPKVKKG 463


>gi|208434794|ref|YP_002266460.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
 gi|226710844|sp|B5Z7P5|SYC_HELPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|208432723|gb|ACI27594.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 465

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 238/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKSKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKAFKE------NKSIQELSSVYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DT+   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTTKDKDYGSLSVHN--SSMEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +     S + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVSGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L +    L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|239622493|ref|ZP_04665524.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
 gi|239514490|gb|EEQ54357.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           CCUG 52486]
          Length = 536

 Score =  461 bits (1187), Expect = e-127,   Method: Composition-based stats.
 Identities = 161/545 (29%), Positives = 236/545 (43%), Gaps = 110/545 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R       
Sbjct: 15  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A                     ++F +    L  L PT +
Sbjct: 75  K--VTFVRNVTDIDDKILDKAAAAGQRWWAR------AYYYEREFTEAYNTLGVLPPTVE 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK----ID 171
           PRAT H+  MI LIQ I+ +GH Y            + FD +S P+YG  + +K    +D
Sbjct: 127 PRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVD 186

Query: 172 E-----QKMGTRVP--------------EKYHKKNPADFILWKRSTPMEP---GWESPWG 209
           E      +MG  V                   K +P DF LWK     +P    W +P+G
Sbjct: 187 EAAAVADRMGPSVDATGADKYNPVDPADVSPDKHDPRDFALWKAPKDTDPEDARWSTPFG 246

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+ 
Sbjct: 247 VGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAA--GYPSAARWMHSA 304

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 305 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 357

Query: 330 AEILLSKWPQ-------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           A+    +                      T+     +    ++A+ +D+N   A  A+  
Sbjct: 358 AQAAYDRVSNFIERAGVALGDLKPNRDEITAVPADDLPADFVAAMNDDVNVSGATAAIFT 417

Query: 371 LARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL------------ 401
             R                       + L    A    LG++   E              
Sbjct: 418 AIRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGVAGGAADG 477

Query: 402 --NKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                   A+E L+ E    R    K K F+ AD IR  L   G  +ED      G + +
Sbjct: 478 TAESPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGS 531

Query: 456 RWKQK 460
            W  K
Sbjct: 532 TWSLK 536


>gi|213691306|ref|YP_002321892.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|213522767|gb|ACJ51514.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
 gi|320457373|dbj|BAJ67994.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           ATCC 15697]
          Length = 549

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 161/544 (29%), Positives = 235/544 (43%), Gaps = 109/544 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R       
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A                     ++F +    L  L PT +
Sbjct: 89  K--VTFVRNVTDIDDKILDKAAAAGQRWWAR------AYYYEREFTEAYNTLGVLPPTVE 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK----ID 171
           PRAT H+  MI LIQ I+ +GH Y            + FD +S P+YG  + +K    +D
Sbjct: 141 PRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVD 200

Query: 172 E-----QKMGTRVPEK--------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
           E      +MG  V                   K +P DF LWK     +P    W +P+G
Sbjct: 201 EAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFG 260

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+C A     +A  W+H+ 
Sbjct: 261 VGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAA--GYPSAARWMHSA 318

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 319 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 371

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                      + S   +    ++A+ +D+N   A  A+   
Sbjct: 372 AQAAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFTA 431

Query: 372 ARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL------------- 401
            R                       + L    A    LG++   E               
Sbjct: 432 IRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGVAGGAADGT 491

Query: 402 -NKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                  A+E L+ E    R    K K F  AD IR  L   G  +ED      G + + 
Sbjct: 492 AESPEHAALEALIAEQLNARAEARKAKDFVKADQIRDALTEAGIAIED------GPQGST 545

Query: 457 WKQK 460
           W  K
Sbjct: 546 WSLK 549


>gi|46190761|ref|ZP_00121063.2| COG0215: Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189439911|ref|YP_001954992.1| cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227545810|ref|ZP_03975859.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|312133327|ref|YP_004000666.1| cyss [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482007|ref|ZP_07941032.1| tRNA synthetase class I catalytic domain-containing protein
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|322690503|ref|YP_004220073.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
 gi|189428346|gb|ACD98494.1| Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|227213926|gb|EEI81765.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
           55813]
 gi|291517397|emb|CBK71013.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
 gi|311772544|gb|ADQ02032.1| CysS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916574|gb|EFV37971.1| tRNA synthetase class I catalytic domain-containing protein
           [Bifidobacterium sp. 12_1_47BFAA]
 gi|320455359|dbj|BAJ65981.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
           1217]
          Length = 549

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 161/544 (29%), Positives = 235/544 (43%), Gaps = 109/544 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R       
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+ +A                     ++F +    L  L PT +
Sbjct: 89  K--VTFVRNVTDIDDKILVKAAAAGQRWWAR------AYYYEREFTEAYNTLGVLPPTVE 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK----ID 171
           PRAT H+  MI LIQ I+ +GH Y            + FD +S P+YG  + +K    +D
Sbjct: 141 PRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVD 200

Query: 172 E-----QKMGTRVPEK--------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
           E      +MG  V                   K +P DF LWK     +P    W +P+G
Sbjct: 201 EAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFG 260

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ 
Sbjct: 261 VGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAA--GYPSAARWMHSA 318

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 319 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 371

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                     T+ S   +    ++A+ +D+N   A  A+   
Sbjct: 372 AQAAYDRVSNFIERAGVALGGQPSREEVTAVSADDLPADFVAAMNDDVNVSGATAAIFTA 431

Query: 372 ARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL------------- 401
            R                       + L    A    LG++   E               
Sbjct: 432 IRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGAAGGAADGT 491

Query: 402 -NKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                  A+E L+ E    R    K K F+ AD IR  L   G  +ED      G + + 
Sbjct: 492 AESPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGST 545

Query: 457 WKQK 460
           W  K
Sbjct: 546 WSLK 549


>gi|317012690|gb|ADU83298.1| cysteinyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 465

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 236/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNFAYKVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTDTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 SDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGNLGEINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L +    L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|308184667|ref|YP_003928800.1| cysteinyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060587|gb|ADO02483.1| cysteinyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 465

 Score =  461 bits (1186), Expect = e-127,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 238/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+++I+ ++    AY  +N +I  DTS   +YGS S           R+    
Sbjct: 113 ASEYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L     
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L +    L D        
Sbjct: 403 PSAYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|325971494|ref|YP_004247685.1| cysteinyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026732|gb|ADY13491.1| cysteinyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 471

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 156/474 (32%), Positives = 227/474 (47%), Gaps = 36/474 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YNT+ R +  F  I  S + +Y CGPTVY++AHIGN R  +  D+L R LR       V
Sbjct: 5   LYNTMSRALEPFHPIKESEVGLYSCGPTVYNYAHIGNLRTFLFEDLLKRTLRVSGF--TV 62

Query: 67  TYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V NITD+     D      + E  +   N     I +  T+ F KD   L  + P+  
Sbjct: 63  NHVMNITDVGHLTGDGDDGEDKLEKMAHTTNRTAWEIAAFYTEAFFKDYDDLNMIRPSTV 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--VP 180
            +AT+H+ QMI LI+ +   GH Y +   + F   SIP+YG  +R  +D  +   R  V 
Sbjct: 123 CKATDHVQQMIDLIKRLEAGGHTYISGGNVYFSIDSIPDYGKLARLDLDALRTAVREDVE 182

Query: 181 EKYHKKNPADFILWK-RSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +KKN  DF+LW  +S   E    W+SPWGRG PGWHIECSAMS HYLG+ FDIH GG
Sbjct: 183 VDGNKKNSKDFVLWFTKSKHGEQAMMWDSPWGRGFPGWHIECSAMSMHYLGESFDIHCGG 242

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +D I  HH NEIAQS  A   +   N W+H  FL  E  KMSKS G F+T++ L      
Sbjct: 243 IDAIPVHHTNEIAQSEAATG-KGWVNYWLHGEFLLDETGKMSKSKGEFLTLSLL------ 295

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKG-------- 345
             + +     R   L  HYR  + F+   L+ A         +     T           
Sbjct: 296 TSKGYEPMDYRYFCLGGHYRSQLKFSFDSLSTARTARRNVYDRIQNLLTQGAKQVVLQRD 355

Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-NASAHILGIEVCK--E 399
                  A L  + NDLNT  A+  L  + ++   + D           + G++     +
Sbjct: 356 EALAYQTAFLQHIQNDLNTPRALADLWGVLKDENLSIDEKYSLCLFFDQVFGLKFDSITK 415

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
              +        L+ +R    K + ++ AD +R +LES G++++D  +  + ++
Sbjct: 416 AEEQTFPSQALALLDQRTEAKKARNWALADSLRSELESMGYVVKDTPSGSSLEK 469


>gi|255037654|ref|YP_003088275.1| cysteinyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
 gi|254950410|gb|ACT95110.1| cysteinyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
          Length = 500

 Score =  460 bits (1184), Expect = e-127,   Method: Composition-based stats.
 Identities = 156/498 (31%), Positives = 233/498 (46%), Gaps = 55/498 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +KI+NTL RK   F  I P  + MYVCGPTVY+  H+GN R  + FD+L+R L +   
Sbjct: 7   QPLKIFNTLTRKKDVFVPIAPPYVGMYVCGPTVYNNVHLGNIRTFLSFDILFRYLTHIGY 66

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS----IITSKNTQQFVKDTTRLACLA 118
           +  V YVRNITD+   + +    E     +          I  + T  F + T     L+
Sbjct: 67  K--VRYVRNITDVGHLVGDGDEGEDKIGKMAKLQKLEPMEIVQRYTNDFHEVTAVFNLLS 124

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQK 174
           P+ +P AT H+ + I  ++ +I  G AYE+N  + FD +        YG  S R I++  
Sbjct: 125 PSIEPTATGHLIEQIEAVEALIEKGVAYESNGSVYFDINKYQAGGNEYGKLSGRIIEDLL 184

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K+NP DF LWK+++P     WESPWG+G PGWH+EC+ MS+ YLGK FD
Sbjct: 185 NETRDLDGQAEKRNPLDFALWKKASPEHIMQWESPWGKGFPGWHLECTCMSAKYLGKQFD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ       E     W+H   L + G+KMSKS GN     EL 
Sbjct: 245 IHGGGMDLKFPHHECEIAQGKSLTGEEP-VRYWMHTNMLTVNGQKMSKSLGNSFLPAELF 303

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
               +   +++    +R  ML + YR  +DF+   L  A+    K               
Sbjct: 304 SGNHELLEQAYSPMTVRFFMLQSQYRSTLDFSNDALKAAQKGYKKLANGLRLAKMLTYTH 363

Query: 341 -------STSKGIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHD---------- 380
                     K  I+ +     +A+ +DLNT  A   L  + +     +           
Sbjct: 364 EDGVNADDAKKADIEKSIDGFYNAMNDDLNTAVAFANLFNMLKYINMLNTGQLKSVALGE 423

Query: 381 -----LLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                L   F      +LG+   KE L +  +I ++ +++        + +   D IR  
Sbjct: 424 AVFTSLKEKFVIFFEDVLGL---KEELAEGHAI-LDGMLKLYREFKLSQNYEKVDEIRSY 479

Query: 435 LESKGFILEDYKNPDNGQ 452
            +++G ++ D K   +  
Sbjct: 480 FKNQGLVIRDTKTRIDWA 497


>gi|322688493|ref|YP_004208227.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
 gi|320459829|dbj|BAJ70449.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
           157F]
          Length = 549

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 160/544 (29%), Positives = 234/544 (43%), Gaps = 109/544 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R       
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+ +A                     ++F +    L  L PT +
Sbjct: 89  K--VTFVRNVTDIDDKILVKAAAAGQRWWAR------AYYYEREFTEAYNTLGVLPPTVE 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK----ID 171
           PRAT H+  MI LIQ I+ +GH Y            + FD +S P+YG  + +K    +D
Sbjct: 141 PRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVD 200

Query: 172 E-----QKMGTRVPEK--------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
           E      +MG  V                   K +P DF LWK     +P    W +P+G
Sbjct: 201 EAAAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFG 260

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ 
Sbjct: 261 VGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAA--GYPSAARWMHSA 318

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 319 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 371

Query: 330 AEILLSKWPQT------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                      + S   +    ++A+ +D+N   A  A+   
Sbjct: 372 AQAAYDRVSNFIERAGVALGGQPSREEVPAVSADDLPADFVAAMNDDVNVSGATAAIFTA 431

Query: 372 ARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL------------- 401
            R                       + L    A    LG++   E               
Sbjct: 432 IRSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGAAGGAADGT 491

Query: 402 -NKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                  A+E L+ E    R    K K F+ AD IR  L   G  +ED      G + + 
Sbjct: 492 AESPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGST 545

Query: 457 WKQK 460
           W  K
Sbjct: 546 WSLK 549


>gi|255322247|ref|ZP_05363393.1| cysteinyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300620|gb|EET79891.1| cysteinyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 462

 Score =  460 bits (1183), Expect = e-127,   Method: Composition-based stats.
 Identities = 158/482 (32%), Positives = 245/482 (50%), Gaps = 52/482 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+++++RK  EF+ +    +R+YVCGPTVYD AH+G+A+  I FD+L R L     + 
Sbjct: 1   MQIFDSVKRKKVEFEPVKSDFVRIYVCGPTVYDDAHLGHAKSAISFDLLRRTLSELGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TDIDDKI+++           +++  IT +    + +D + L  L P  +P+
Sbjct: 60  -VKFVRNYTDIDDKILKK------MSESGESLEAITDRYIASYERDMSALNVLEPDVKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  + +MI  I+ ++ +G AYE A++ I FDT+    Y S S  K D +    RV    
Sbjct: 113 ATQTLKEMIGYIEILLKNGFAYEIADDGIYFDTAKDAEYLSLSG-KFDTEANVARVESNL 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVF--DIHGGGLD 239
            K++  DF+LWK     E  +ESP+GRGRPGWH EC AM   +L  G+ F  DIH GGLD
Sbjct: 172 QKEDKKDFVLWKF---DEKWYESPFGRGRPGWHTECVAMIKKHLSSGEKFEIDIHAGGLD 228

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ  CA+  +  A  W+HNGF+ +   KMSKS GN   + + LE      
Sbjct: 229 LLFPHHENEAAQCRCAEH-KNLAKYWLHNGFIQVNNEKMSKSLGNSFFVKDALERNL--- 284

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDP 349
                  +R  ++ +HYR   +F+   L  A+  L K  +            ++      
Sbjct: 285 ----GEAVRFYLISSHYRANFNFSEDDLNAAKKRLDKIYRLKKRVLGAAANLSANDKFKS 340

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGI---- 394
             +SA+ +DLNT  A+ ++ +  R +            K  ++       A +LGI    
Sbjct: 341 DFMSAMGDDLNTSKALASVDEFVRSANDELDANPKDKAKKSEIAANLELIARVLGILQVD 400

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++      IE L+ +R      K +  +D IR  L + G  L D  +    +
Sbjct: 401 VFEYFQFGVSDEKRAYIEDLINQRNEAKAAKNYELSDKIRDMLAANGISLMDTLSGCMWE 460

Query: 453 RM 454
           ++
Sbjct: 461 KI 462


>gi|14325506|dbj|BAB60409.1| tRNA synthetase Cys [Thermoplasma volcanium GSS1]
          Length = 472

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 160/474 (33%), Positives = 245/474 (51%), Gaps = 40/474 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ + IYNTL R++ EF  +    + ++VCGPTV D  HIG+AR  I FD + + L+   
Sbjct: 16  EQLMLIYNTLTRRLQEFNEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKLEG 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V Y++NITDIDDKII RA++      +    S +      +F +D  RL   +   
Sbjct: 76  Y--SVFYLQNITDIDDKIINRAKE------MGIEPSEVAKIYFSEFQEDMKRLKVDSVNF 127

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
             RAT +I +++  I  ++  G+AYE ++ + F+     +YG  S + +D+   G RV  
Sbjct: 128 FARATLYIDEIVSQISRMMEKGYAYETDDGVYFEVRKFKDYGELSNQSLDQIIAGYRVAV 187

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             +K+NP DF+LWK+    EP W SPWG GRPGWHIE +A++  Y G  +DIHGGG DLI
Sbjct: 188 NENKRNPEDFVLWKKKKAGEPSWPSPWGEGRPGWHIEDTAITETYFGDEYDIHGGGSDLI 247

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHE EIAQ          A+ WIH G +N+   KMSKS  NFITI ++L       + 
Sbjct: 248 FPHHEAEIAQMRSISGKRYLAHYWIHTGMININKEKMSKSLKNFITIRDIL-------KD 300

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVL 352
           +    +R A+L  +YR  I+F+ + + E++ L+     T      ++          +V+
Sbjct: 301 YRPEDLRFAILNANYRTQIEFSKELMEESKKLIDYINDTYRKLEYVNGSGNFKIDVNSVI 360

Query: 353 SAL----YNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKE 399
           S +     ND +  S I  L  +  E  +N          +L  ++      LGI   K+
Sbjct: 361 SEMRSLAENDFDFHSVIVKLLAITGEINRNFEGINKEVAEELKKVYLWVDTFLGILEQKK 420

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            ++K I   ++ LV+ R  + K K F  +D IR  L+  G  +ED  +     +
Sbjct: 421 EVSKGI---VDDLVELRTRMRKEKNFLISDAIRDVLKKNGIHIEDRGDVTVWWQ 471


>gi|304390348|ref|ZP_07372301.1| cysteine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
 gi|304326104|gb|EFL93349.1| cysteine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
           35241]
          Length = 506

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 158/501 (31%), Positives = 240/501 (47%), Gaps = 87/501 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++               + +   ++F      L  + PT  P 
Sbjct: 59  AVTYVRNVTDIDDKILAKSAAAGVPWW------ELAAHFEREFDFAYRALNTVPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQ-----KMGTR 178
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + + E      +    
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 TATETGKRDPRDFALWKAAKDDEPSDATWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE  
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------ 337
                 W   V+R++++ THYR  ++++   L +A +L  K+                  
Sbjct: 290 ------WDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLLQVPRSVPAETAAP 343

Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---------E 374
                          Q   +   +    ++AL +DLN   A+ ALH+  +         +
Sbjct: 344 EVRNVYGDVNPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNSGD 403

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
           +T          A   + G++                          N +++  +  L+Q
Sbjct: 404 TTGAQQEALQLRAMLDVFGLDPHDPAWVASVSAAETPGTAPNPTETPNDSLTALVTALLQ 463

Query: 415 ERLILLKMKKFSSADYIRKQL 435
           +R      + +  AD IR  L
Sbjct: 464 QRGEAKAQRDWGRADAIRDLL 484


>gi|315657556|ref|ZP_07910438.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
 gi|315492028|gb|EFU81637.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
           35242]
          Length = 506

 Score =  459 bits (1182), Expect = e-127,   Method: Composition-based stats.
 Identities = 161/501 (32%), Positives = 243/501 (48%), Gaps = 87/501 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++               + +   ++F      L  + PT  P 
Sbjct: 59  AVTYVRNVTDIDDKILAKSAAAGVPWW------ELAAHFEREFDFAYRALNTVPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQ-----KMGTR 178
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + + E      +    
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 TATEAGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE  
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------P 338
                 W   V+R++++ THYR  ++++   L +A +L  K+                 P
Sbjct: 290 ------WDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLQQVPRSVPAETAAP 343

Query: 339 QTSTSKGIIDP---------------AVLSALYNDLNTVSAIQALHKLAR---------E 374
           +     G +DP                 ++AL +DLN   A+ ALH+  +         +
Sbjct: 344 EVRNVYGDVDPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNSGD 403

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
           +T          A   + G++                          N +++  +  L+Q
Sbjct: 404 TTGAQQEALQLRAMLDVFGLDPHDPAWVASVSATETPGTEPNPTDTPNDSLTALVTALLQ 463

Query: 415 ERLILLKMKKFSSADYIRKQL 435
           +R      + +  AD IR  L
Sbjct: 464 QRGEAKAQRDWGRADAIRDLL 484


>gi|298345949|ref|YP_003718636.1| cysteine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
 gi|298236010|gb|ADI67142.1| cysteine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
          Length = 506

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 158/501 (31%), Positives = 240/501 (47%), Gaps = 87/501 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+++   ++ +F  + P  + +Y+CGPTV    H+G+ R  + FDVL R LR      
Sbjct: 1   MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++               + +   ++F      L  + PT  P 
Sbjct: 59  AVTYVRNVTDIDDKILAKSAAAGVPWW------ELAAHFEREFDFAYRALNTVPPTVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQ-----KMGTR 178
           AT HIPQ I LI+ ++  GHAY + N  + F  +S+P+YG+ + + + E      +    
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK +   EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 TATETGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE+AQS  A      A  W+HN +L L+G KMSKS GN + +  LLE  
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------ 337
                 W   V+R++++ THYR  ++++   L +A +L  K+                  
Sbjct: 290 ------WDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLLQVPRSVPAETAAP 343

Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---------E 374
                          Q   +   +    ++AL +DLN   A+ ALH+  +         +
Sbjct: 344 EVRNVYGDVNPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNSGD 403

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
           +T          A   + G++                          N +++  +  L+Q
Sbjct: 404 TTGAQQEALQLRAMLDVFGLDPHDPAWVASVSAAETPGTAPNPTETPNDSLTALVTALLQ 463

Query: 415 ERLILLKMKKFSSADYIRKQL 435
           +R      + +  AD IR  L
Sbjct: 464 QRGEAKAQRDWGRADAIRDLL 484


>gi|156974741|ref|YP_001445648.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156526335|gb|ABU71421.1| hypothetical protein VIBHAR_02459 [Vibrio harveyi ATCC BAA-1116]
          Length = 457

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 154/462 (33%), Positives = 236/462 (51%), Gaps = 25/462 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K++++NTL R +  F  I+   + +Y CGPTVYD+AH GN R  +  DVL R L    
Sbjct: 3   QPKLQLFNTLGRTLEPFNTIETGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLELNG 62

Query: 62  GEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V +V NITD+   + +      + E  +   N +   I       F+ D  RL  +
Sbjct: 63  YD--VNHVMNITDVGHLVSDADTGEDKMEKGARKQNKSAWEIAKYFEDVFLDDLNRLNII 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+   RAT HI + I  +  +   G  Y+ ++ + FD++ +P+YG  ++   +  + G 
Sbjct: 121 EPSIICRATEHIQEQIEFVLELEQKGFTYQTSDGVYFDSAKLPDYGKLAKLDREGLEAGI 180

Query: 178 RVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           RV E   KK+P DF LWK S  TP +  WESPWG G PGWHIECSAM+  YLG+VFDIH 
Sbjct: 181 RV-EMAEKKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGEVFDIHV 239

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ    +   + AN W+H  FL L   K+SKS G  + ++ L+E  
Sbjct: 240 GGEDHIPVHHTNEIAQCQAKNGHVQ-ANYWLHGFFLQLNKEKISKS-GTSLRLDALIE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIID---- 348
               + +     R  +L +HYR  + FT + L  A+  L +    +++    G +D    
Sbjct: 296 ----KGYDPLAYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKASALPEGGKVDQTNV 351

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
              +S + NDL    AI  + +L   +  + D          + G+E+ K    + I   
Sbjct: 352 ERFMSLINNDLAMPQAIALMWELLGSALNDADKKATARYFDRVFGLELDK-VEEEEIPSE 410

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           I +LV+ RL + K K++  AD IR+++   G+ + D  +   
Sbjct: 411 ILELVELRLQMKKQKEYQQADEIRQKVAELGYRINDAGDGST 452


>gi|254779493|ref|YP_003057598.1| cysteinyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001404|emb|CAX29397.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
           [Helicobacter pylori B38]
          Length = 465

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 154/487 (31%), Positives = 237/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VMLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+    
Sbjct: 113 ASEYLDAMVCMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFETLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCTFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L +    L D        
Sbjct: 403 PSAYFQLGVSESEKQEIESKIEERKRAKERKDFLKADSIREELLNHKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|239947072|ref|ZP_04698825.1| cysteinyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921348|gb|EER21372.1| cysteinyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 350

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 165/346 (47%), Positives = 220/346 (63%), Gaps = 15/346 (4%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ +  +YNTL R    F   D +N++MYVCGPTVYD  HIGN+R ++V+D+LYR++   
Sbjct: 1   MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G + V YVRNITD+DDKII+RA        +   I+ +T K TQ+F  +   L C+ P+
Sbjct: 61  FGSRAVKYVRNITDVDDKIIDRAEL------LGITINELTDKVTQEFHTNMAYLGCMLPS 114

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +P+AT HI  MI +I+ +I   HAY A+N + FD  S PNY   S R ++E   G RV 
Sbjct: 115 IEPKATEHIDVMIEIIERLITKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVRVE 174

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               KKNP DF+LWK +   E     +ESPWG GRPGWHIECSAMS  YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHH NEIAQS CA      A  WIHNGFL + G+KMSKS GNFIT+ +L++    
Sbjct: 235 ADLIFPHHTNEIAQSRCAFLSSTYAKYWIHNGFLTVNGKKMSKSLGNFITVRDLMD---- 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
             +     V+RL +L +HYR P+D+  + + +A+  L  W +   +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIEN 334


>gi|297572189|ref|YP_003697963.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
 gi|296932536|gb|ADH93344.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
          Length = 475

 Score =  458 bits (1178), Expect = e-126,   Method: Composition-based stats.
 Identities = 159/494 (32%), Positives = 242/494 (48%), Gaps = 65/494 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++  R + EF ++ P  + +Y+CG TV    HIG+ R  + FDVL R LR    E 
Sbjct: 3   LHIYDSATRAMREFTSLVPGKVGIYLCGATVQGSPHIGHMRSAVAFDVLVRWLRRSGYE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             T VRN+TDIDDKI+ ++                      +F +    L  L PT++PR
Sbjct: 62  -TTMVRNVTDIDDKILAKSAD------AGREFWAHAYIYENEFTQAYDALGVLRPTYEPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT H+P+MI  I  +I  GHAY  +   + FD +S+ +YGS +R+ +D+         + 
Sbjct: 115 ATGHVPEMIAFIARLIERGHAYPGDSGNVYFDVASLADYGSLTRQTLDD--FNDDAAVEP 172

Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            K+NP DF LWK + P EP    W++PWGRGRPGWH+ECSAM+  YLG+ FDIHGGG+DL
Sbjct: 173 DKRNPRDFALWKAAKPGEPASASWDTPWGRGRPGWHLECSAMAGKYLGESFDIHGGGIDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + ++ +LE       
Sbjct: 233 RFPHHENEQAQSHGAGYG--FAQYWMHNAWVTIDGEKMSKSLGNSLIVSRILE------- 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------TSTS 343
            +PA V+RLA+   HYR  + ++ + L EA  +  +                        
Sbjct: 284 EYPAVVVRLALGAVHYRSTVAYSDRTLAEAGAVWDRLAGFVRRAIDAVGEVPAEEVAGIG 343

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGI 394
              +    + A+ +D+N  +A+  +H+                      +  A   +LG+
Sbjct: 344 LAELPDEFVDAMDDDVNVSAALAVIHEHVTAGNNAIAAEEHVEIRQEQALVRAMLDVLGL 403

Query: 395 EVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + C    ++           +   +  ++ ER      K ++ AD +R  L++ G  +ED
Sbjct: 404 DPCASPWHEESSAGSDYHEALDSLVHAILNERAAARAAKDWARADALRDSLQTAGIQVED 463

Query: 445 YKNPDNGQRMTRWK 458
                      RWK
Sbjct: 464 SAA------GARWK 471


>gi|291277354|ref|YP_003517126.1| cysteinyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964548|emb|CBG40401.1| cysteinyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 486

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 153/487 (31%), Positives = 239/487 (49%), Gaps = 49/487 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +KIY++  ++      I    +R+YVCGPTVYD AH+G+AR  IVFD+L R L    
Sbjct: 16  RASMKIYDSKSKQKVPLVPIKEKEVRIYVCGPTVYDDAHLGHARSSIVFDLLRRTLNLSG 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +   T V+N TDIDDKII ++      +        +T      ++ D  RL  L P  
Sbjct: 76  YK--TTLVKNFTDIDDKIIHKSLNHQIPL------EEVTQTYIHSYIHDMDRLNVLPPDI 127

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            P+AT  +  +I  ++ ++  GHAY++ N ++  D    P YGS S+R +D++   +R+ 
Sbjct: 128 HPKATQSLGAIISFVERLLHRGHAYQSENGDVYLDVKKDPLYGSLSQRGVDDENQ-SRIQ 186

Query: 181 EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIH 234
           E   KK+P DF+LWK      + G+ESP+G GRPGWHIECSAM   +L         DIH
Sbjct: 187 ENKEKKDPRDFVLWKTYKGEDDIGYESPFGFGRPGWHIECSAMIDEHLAYKDEDFCIDIH 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHENE +Q+ CA   E  A  W+HN  +++ G KMSKS GN   + + L  
Sbjct: 247 GGGADLLFPHHENEASQTRCAYDSE-LAKYWMHNEMVHINGEKMSKSLGNSFFVKDAL-- 303

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIIDPA 350
                +     ++R  +L THYR  + F  + L  ++  L K  +        +G+ D  
Sbjct: 304 -----KFHDGEILRNYLLTTHYRAILHFNEEDLLMSKKRLDKIYRLKKRALPVQGVRDKD 358

Query: 351 VLSA----LYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE 395
             +     + +DLN    +  L +    + ++ D           ++        +LGI 
Sbjct: 359 FEARLLHPMQDDLNISQTLSVLDEFLAHANQSLDQNPKDKALHANIISNLAFIEALLGIG 418

Query: 396 ------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                   +  +++     IE+ + ER    K K +  AD IR++L  +G  + D     
Sbjct: 419 GKDGKVYFQLGVSEEKVKWIEEKIHERKNAKKEKNYVLADEIRQELHEEGIAIMDTAEGT 478

Query: 450 NGQRMTR 456
             +   +
Sbjct: 479 VWENTAK 485


>gi|150398926|ref|YP_001322693.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150011629|gb|ABR54081.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 459

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 160/475 (33%), Positives = 238/475 (50%), Gaps = 50/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYNTL +K   F     + ++++VCGPT Y  +HIG+AR  I FD + R L+Y     
Sbjct: 2   LQIYNTLSKKEELFLPNHQNIVKLFVCGPTTYAESHIGHARTYIAFDAIVRYLKYLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII++A+ +  +        +++    +++++D   L         R
Sbjct: 60  TVFYLQNITDIDDKIIDKAKIQSKN------PDLLSKHYEKKYLEDMENLGVNNVNFYAR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT H  ++I  ++ +I  G AYE  N + F+ S    +G  S + I+E  +  RV     
Sbjct: 114 ATEHTFEIINQVKILIEKGFAYETENGVYFEVSKFQEFGKLSNQNIEELNVH-RVNPDGL 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+  DF+LWK+ +  +P W+SPWG GRPGWHIE +A++  Y G  +DIHGGGLDLIFPH
Sbjct: 173 KKDVKDFVLWKKVSE-KPCWDSPWGFGRPGWHIEDTAITEKYFGPKYDIHGGGLDLIFPH 231

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ       +     W+H GFLN+ G KMSKS  NFITI E+LE        + A
Sbjct: 232 HEAEIAQMESISGEKPMVKYWMHTGFLNVNGTKMSKSLSNFITIKEILE-------KYNA 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
              R  +L THYR PIDF+ + L  ++    +      S     P               
Sbjct: 285 LEFRFFVLSTHYRSPIDFSSENLEASKKSFERITNFIKSTEFFIPILEIEHENDDLVEQN 344

Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAHIL 392
                     A+ ND NT  AI A+    R   K+ +              +      +L
Sbjct: 345 IKFTKEKFFDAMNNDFNTPLAISAIFGYVRFINKHLNDKNISKKSLLKSSELIFELMQVL 404

Query: 393 GIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           G E+      +KN    ++ ++  R  L + K++  +DYIR +L      ++D K
Sbjct: 405 GFEIKTNLKNDKNAEELLDLILNVRSKLREKKEWEISDYIRNRLNEINIKIDDIK 459


>gi|13542075|ref|NP_111763.1| cysteinyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|21264017|sp|Q978Z5|SYC_THEVO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 454

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 160/471 (33%), Positives = 243/471 (51%), Gaps = 40/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL R++ EF  +    + ++VCGPTV D  HIG+AR  I FD + + L+      
Sbjct: 1   MLIYNTLTRRLQEFNEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKLEGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII RA++      +    S +      +F +D  RL   +     R
Sbjct: 59  SVFYLQNITDIDDKIINRAKE------MGIEPSEVAKIYFSEFQEDMKRLKVDSVNFFAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I +++  I  ++  G+AYE ++ + F+     +YG  S + +D+   G RV    +
Sbjct: 113 ATLYIDEIVSQISRMMEKGYAYETDDGVYFEVRKFKDYGELSNQSLDQIIAGYRVAVNEN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK+    EP W SPWG GRPGWHIE +A++  Y G  +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKKKAGEPSWPSPWGEGRPGWHIEDTAITETYFGDEYDIHGGGSDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ          A+ WIH G +N+   KMSKS  NFITI ++L       + +  
Sbjct: 233 HEAEIAQMRSISGKRYLAHYWIHTGMININKEKMSKSLKNFITIRDIL-------KDYRP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLSAL 355
             +R A+L  +YR  I+F+ + + E++ L+     T      ++          +V+S +
Sbjct: 286 EDLRFAILNANYRTQIEFSKELMEESKKLIDYINDTYRKLEYVNGSGNFKIDVNSVISEM 345

Query: 356 ----YNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHLN 402
                ND +  S I  L  +  E  +N          +L  ++      LGI   K+ ++
Sbjct: 346 RSLAENDFDFHSVIVKLLAITGEINRNFEGINKEVAEELKKVYLWVDTFLGILEQKKEVS 405

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           K I   ++ LV+ R  + K K F  +D IR  L+  G  +ED  +     +
Sbjct: 406 KGI---VDDLVELRTRMRKEKNFLISDAIRDVLKKNGIHIEDRGDVTVWWQ 453


>gi|154151531|ref|YP_001405149.1| cysteinyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000083|gb|ABS56506.1| cysteinyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 419

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 164/446 (36%), Positives = 239/446 (53%), Gaps = 32/446 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL R +     + P  + ++VCGPTVYD++H+G+AR  +VFDVL + LR+    K
Sbjct: 1   MKLYSTLSRTVEPLVTLHPDRVALFVCGPTVYDYSHLGHARTYVVFDVLAKYLRW--NGK 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII RA++E        + S +  K   ++++D   L   A ++  R
Sbjct: 59  EVFYLQNITDVDDKIINRAKEE------GVSQSELARKFETEYLRDMKSLGIDAVSYYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I  ++ ++  G AY  +  + F+  +    G  S +  +  K  +RV +   
Sbjct: 113 ATTHIPEIIDQVRRLVDKGVAYVTDTGVYFNLDTFDRNGELSGQ--ERAKRKSRVSDSS- 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K N  DF LWK     E  W+SPWGRGRPGWHIE +A+S  Y G+ +D+HGGGLDLIFPH
Sbjct: 170 KHNALDFALWKLGEFGEYTWDSPWGRGRPGWHIEDTAISEKYFGQQYDMHGGGLDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ    +        W+H GFL ++G KMSKS GNFITI + L       ++W  
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWLHTGFLTVKGEKMSKSLGNFITIRDAL-------KTWNK 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----AVLSALYNDLN 360
            V+R ++L++HYR P+  T +    A   L      +T     D     A   A+  DLN
Sbjct: 283 DVLRYSILLSHYRSPLQATDEGFANAAKGLEHIRAIATKDKGADAEGRKAFTDAMETDLN 342

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T  AI A+ +LA         L        ILGI   +E      S  +  L   R  L 
Sbjct: 343 TPMAIAAIQRLAGNGD-----LEALREYGEILGINFLRES-----SAPLSVLEDIRAELR 392

Query: 421 KMKKFSSADYIRKQLESKGFILEDYK 446
             K+F  +D IR ++ + G  + D +
Sbjct: 393 AKKQFEVSDLIRDRMAAAGIHITDKR 418


>gi|315227039|ref|ZP_07868826.1| cysteinyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
 gi|315119489|gb|EFT82622.1| cysteinyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
          Length = 557

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 158/556 (28%), Positives = 239/556 (42%), Gaps = 123/556 (22%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IY+T   K+ +F+ + P  + MYVCG TV    H+G+ R  + FDV+ R       
Sbjct: 21  SGVRIYDTAHHKVMDFRPVTPGKVTMYVCGATVQASPHVGHVRAGVSFDVIRRWFMKLGY 80

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+VRN+TDIDDKI+++A  +  +               Q+F +    L  L PT++
Sbjct: 81  E--VTFVRNVTDIDDKILDKAAADGQNWWAR------AYYYEQEFSQAYRVLGVLTPTYE 132

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT H+  M+ L+Q +I  GHAY         +  + FD  S P+YG  + ++   Q  
Sbjct: 133 PRATGHVTDMVDLVQRLIDRGHAYLIPNPDGSPSGNVYFDVPSWPHYGELTHQQAGTQAT 192

Query: 176 G---TRVPE----------------------KYHKKNPADFILWKRSTPMEP---GWESP 207
           G    R+ +                         K +P DF LWK S   +P    W +P
Sbjct: 193 GDESARIADAMGPSVDAAGEDKYNPADEADLSEEKHDPRDFALWKASKDSDPLTARWRTP 252

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           +G GRPGWH+ECSAMS  YLG  FDIHGGGLDL FPHHENE+AQS  A      A+ W+H
Sbjct: 253 FGTGRPGWHLECSAMSHRYLGDEFDIHGGGLDLRFPHHENEMAQSRAAGWG--FAHYWMH 310

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           + ++  +G KMSKS GN ++I  +L             ++R A+    YR  ++++ Q +
Sbjct: 311 SAWVTQKGEKMSKSLGNGLSIPVVLS-------QCTPWMVRYALATVQYRSMLEWSQQTI 363

Query: 328 TEAEILLSKWPQTSTSKGI-----------------IDPAVLSALYNDLNTVSAIQALHK 370
            EA+   S+        G                  +    ++A+ +D N  +A+ A+  
Sbjct: 364 AEAQSAYSRISNFLDHAGAAVGQPSRQEVTSYPADQLPQDFIAAMNDDFNVSTALAAVFS 423

Query: 371 LARESTKNHDLLPIF--------------------NASAHILGIEVCKEHL--------- 401
             R      + L                        A   + G++               
Sbjct: 424 SIRYGNTTMNDLATLPEGSERDQAITLLKESLLLVRAMLDVFGLDPLDPQWLPGGDGFPA 483

Query: 402 -------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                              +K +   I   + +R    K K F+ AD IR  L + G  +
Sbjct: 484 QAEDSAQADKTSGASSSQTSKVLDSLIRSQLDQRQAARKAKDFARADAIRNSLAAAGISI 543

Query: 443 EDYKNPDNGQRMTRWK 458
           ED      G + + WK
Sbjct: 544 ED------GPQGSSWK 553


>gi|29290062|gb|AAO72326.1| cysteinyl tRNA synthetase [synthetic construct]
          Length = 465

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 155/487 (31%), Positives = 238/487 (48%), Gaps = 56/487 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+    
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQ 170

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGG 237
            K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I + L     
Sbjct: 231 ADLLFPHHENEACQTRCTFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV-- 351
             +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P    
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
             L  + +DLN   A+  L  +   + +  D           +L        +LGI    
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +++    IE  ++ER    + K F  AD IR++L  +   L D        
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKIFLKADSIREELLKQKIALMDT------P 456

Query: 453 RMTRWKQ 459
           + T W++
Sbjct: 457 QGTIWEK 463


>gi|229818303|ref|ZP_04448584.1| hypothetical protein BIFANG_03603 [Bifidobacterium angulatum DSM
           20098]
 gi|229784173|gb|EEP20287.1| hypothetical protein BIFANG_03603 [Bifidobacterium angulatum DSM
           20098]
          Length = 548

 Score =  457 bits (1176), Expect = e-126,   Method: Composition-based stats.
 Identities = 158/542 (29%), Positives = 231/542 (42%), Gaps = 108/542 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+Y+T    ++ F  I P  + MYVCG TV    HIG+ R  + FD++ R       +
Sbjct: 30  RLKLYDTASHAVSTFTPIKPGEVGMYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGYQ 89

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++A  E                  ++F +  + L  L PT +P
Sbjct: 90  --VTFVRNVTDIDDKILDKAAAEGQQWWAR------AYHYEREFSQAYSDLGVLPPTVEP 141

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRK------- 169
           RAT H+  MI +IQ II +GHAY    +       + FD +S P+YG  + +K       
Sbjct: 142 RATGHMADMIDMIQRIIDNGHAYVVRGDDGKPTGNVYFDVASWPHYGELTHQKQTAVADA 201

Query: 170 ----IDEQKMGTRVPEK------------YHKKNPADFILWKRSTPMEP---GWESPWGR 210
                D                         K +P DF LWK     +P    W +P+G 
Sbjct: 202 ASEVADAMGPSVDNAGDDKYNPVDPADASPDKHDPRDFALWKAPKDSDPLDARWNTPFGT 261

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWHIECSAMS  YL   FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ +
Sbjct: 262 GRPGWHIECSAMSHRYLKDGFDIHGGGLDLRFPHHENEMAQTRAAGYDS--AARWMHSAW 319

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L EA
Sbjct: 320 VTAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGGVQYRSMLEWSDQTLAEA 372

Query: 331 EILLSKWPQTSTSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLA 372
           +    +        GI                  +    ++A+ +D+N   A  A+    
Sbjct: 373 QSAYDRISNFIERAGIAIGEQPSRTEVASVPADALPADFVAAMNDDINVSGATAAIFTAI 432

Query: 373 RESTKNHDLLPI-----------------FNASAHILGIEVCKEHL-------------- 401
           R        L                     A    LG++   E                
Sbjct: 433 RSGNTLLSKLADRADSDAAKAEVREVLLGVRAMLDTLGLDPLAEPWVNGGAAGGAAGEGE 492

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  +   I + +  R    K K F+ AD IR  L + G  +ED      G + + W 
Sbjct: 493 SAEHDVLDSLIREQLTARAEARKAKDFAKADAIRDALNAAGIAIED------GPQGSTWS 546

Query: 459 QK 460
            +
Sbjct: 547 LQ 548


>gi|294787393|ref|ZP_06752646.1| cysteine--tRNA ligase [Parascardovia denticolens F0305]
 gi|294484749|gb|EFG32384.1| cysteine--tRNA ligase [Parascardovia denticolens F0305]
          Length = 550

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 158/556 (28%), Positives = 239/556 (42%), Gaps = 123/556 (22%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IY+T   K+ +F+ + P  + MYVCG TV    H+G+ R  + FDV+ R       
Sbjct: 14  SGVRIYDTAHHKVMDFRPVTPGKVTMYVCGATVQASPHVGHVRAGVSFDVIRRWFMKLGY 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+VRN+TDIDDKI+++A  +  +               Q+F +    L  L PT++
Sbjct: 74  E--VTFVRNVTDIDDKILDKAAADGQNWWAR------AYYYEQEFSQAYRVLGVLTPTYE 125

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT H+  M+ L+Q +I  GHAY         +  + FD  S P+YG  + ++   Q  
Sbjct: 126 PRATGHVTDMVDLVQRLIDRGHAYLIPNPDGSPSGNVYFDVPSWPHYGELTHQQAGTQAT 185

Query: 176 G---TRVPE----------------------KYHKKNPADFILWKRSTPMEP---GWESP 207
           G    R+ +                         K +P DF LWK S   +P    W +P
Sbjct: 186 GDESARIADAMGPSVDAAGEDKYNPADEADLSEEKHDPRDFALWKASKDSDPLTARWRTP 245

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           +G GRPGWH+ECSAMS  YLG  FDIHGGGLDL FPHHENE+AQS  A      A+ W+H
Sbjct: 246 FGTGRPGWHLECSAMSHRYLGDEFDIHGGGLDLRFPHHENEMAQSRAAGWG--FAHYWMH 303

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           + ++  +G KMSKS GN ++I  +L             ++R A+    YR  ++++ Q +
Sbjct: 304 SAWVTQKGEKMSKSLGNGLSIPVVLS-------QCTPWMVRYALATVQYRSMLEWSQQTI 356

Query: 328 TEAEILLSKWPQTSTSKGI-----------------IDPAVLSALYNDLNTVSAIQALHK 370
            EA+   S+        G                  +    ++A+ +D N  +A+ A+  
Sbjct: 357 AEAQSAYSRISNFLDHAGAAVGQPSRQEVTSYPADQLPQDFIAAMNDDFNVSTALAAVFS 416

Query: 371 LARESTKNHDLLPIF--------------------NASAHILGIEVCKEHL--------- 401
             R      + L                        A   + G++               
Sbjct: 417 SIRYGNTTMNDLATLPEGSERDQAITLLKESLLLVRAMLDVFGLDPLDPQWLPGGDGFPA 476

Query: 402 -------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                              +K +   I   + +R    K K F+ AD IR  L + G  +
Sbjct: 477 QAEDSAQADKTSGASSSQTSKVLDSLIRSQLDQRQAARKAKDFARADAIRNSLAAAGISI 536

Query: 443 EDYKNPDNGQRMTRWK 458
           ED      G + + WK
Sbjct: 537 ED------GPQGSSWK 546


>gi|184201515|ref|YP_001855722.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|229558711|sp|B2GFS8|SYC_KOCRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|183581745|dbj|BAG30216.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 479

 Score =  457 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 161/487 (33%), Positives = 239/487 (49%), Gaps = 50/487 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++ Y+T    I +F  + P   R+Y CG TV    HIG+ R  +VFDVL R LR+   
Sbjct: 1   MTLRFYDTASATIKDFVPVHPGEARLYYCGATVQGAPHIGHVRSALVFDVLARWLRFRGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPIND----AISIITSKNTQQFVKDTTRLACLA 118
           E  VT VRN+TDIDDKI+  +R  +      D        +  +    F +    L    
Sbjct: 61  E--VTTVRNVTDIDDKILVNSRASYEQDYSGDHAREPWWALAYRFEGVFGQAYAALGIDR 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PT++PRAT H+P+M  LIQ +I  GHAY A   + ++ FD  S P YG  +R+++++ + 
Sbjct: 119 PTYEPRATGHVPEMHALIQELIDAGHAYPATDGSGDVYFDVRSWPRYGELTRQRVEDMQD 178

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK     EP    W+SPWGRGRPGWH+ECSAM+  YLG  FD
Sbjct: 179 APDADPR-GKRDPRDFALWKGRKEDEPLSASWDSPWGRGRPGWHLECSAMAGKYLGAHFD 237

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGGLDL FPHHENE+AQS  A    + AN W+HNG +  EG KMSKS GN ++  ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAA--GREFANFWLHNGLVTYEGEKMSKSIGNTVSPQDML 295

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------- 344
                  R      +R  +   HYR  +D+    L EA   + +      +         
Sbjct: 296 -------REARPLAVRYYLGQAHYRSVLDYRPTSLQEATAAVERVEAVLVAARAAGLGLD 348

Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHIL 392
                +    ++ + +DLN   A+  LH+  R +              L+      + +L
Sbjct: 349 RDTQDVPAEFVAVMDDDLNVPRALAVLHETVRAANSALATGDHDAARPLVAAVAGMSDVL 408

Query: 393 GIEVCKEHLNK--------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           G+    +             + + ++ L+ +R      + ++SAD IR QL + G +++D
Sbjct: 409 GLLQLMDLEGAGAGGAEHRALDVLVQDLLAQRAAARTARDWASADRIRDQLAAAGVVVKD 468

Query: 445 YKNPDNG 451
                  
Sbjct: 469 GAQGSAW 475


>gi|154175222|ref|YP_001408206.1| cysteinyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166200139|sp|A7GYB4|SYC_CAMC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|112802485|gb|EAT99829.1| cysteinyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 460

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 153/486 (31%), Positives = 240/486 (49%), Gaps = 58/486 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+++++++   F+ I      +Y+CGPTVYD AH+G+A+  + FD+L R+L     E 
Sbjct: 1   MQIFDSVKKQKVAFEPIKSGKASIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLLELGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +VRN TDIDDKI+++            ++  IT +    +  D + L  + P  +P+
Sbjct: 60  -VKFVRNYTDIDDKILKK------MSDTGKSLEEITQRYIASYEADMSALNVMQPDIKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +  +I  IQ ++  G AYE  + I FDT     Y S S +  +   +  RV     
Sbjct: 113 ATQCLEAIINYIQKLVDKGVAYELKDGIYFDTGKDARYFSLSGKD-NNTDLIARVQSNDE 171

Query: 185 KKNPADFILWKRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGLD 239
           K++  DF+LWK     +  W ESP+GRGRPGWH EC AM   YL        DIH GG+D
Sbjct: 172 KRDEKDFVLWK----FDDKWYESPFGRGRPGWHSECVAMIKQYLSNDGEYEIDIHAGGID 227

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE AQ  CA+  +K A  W+HNGF+ +   KMSKS GN   + + L       
Sbjct: 228 LLFPHHENEAAQCRCAEH-KKLAKYWMHNGFIKVNNEKMSKSLGNSFFVKDAL------- 279

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPA 350
           +S P   +R  ++ +HYR   +++ + L  A+  L K  +           T +     +
Sbjct: 280 KSVPGEALRFYLIASHYRAHFNYSQEDLFAAKKRLDKIYRLKKRVLGVSAGTCEPNFKAS 339

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHILGI----- 394
           VL AL +DLNT  A+ ++ +  + +    DL                    + G+     
Sbjct: 340 VLEALSDDLNTSKALASVDEFVKSANDGLDLDPKNKALKAQIAANLEFITRVFGVGAMDG 399

Query: 395 -EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            E  +  ++ +    I+ L+ ER    K + FS AD IRK+L +    + D        +
Sbjct: 400 FEYFQFGVSDDEKAKIKALLDERTQAKKERNFSKADEIRKKLNAMDIAIMDT------AQ 453

Query: 454 MTRWKQ 459
            T W++
Sbjct: 454 GTMWEK 459


>gi|332287758|ref|YP_004422659.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
 gi|325506592|gb|ADZ18230.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
          Length = 444

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 158/460 (34%), Positives = 236/460 (51%), Gaps = 51/460 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MY CGPTVYD+AHIGN R  +  D+L R L   +    V +V NITD+DDK +  A    
Sbjct: 1   MYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LFFGYSVKHVMNITDVDDKTLAGA---- 54

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N ++   T+   Q F +D   L  L     PRAT++IPQM+  I+ ++  G AY 
Sbjct: 55  --CKKNISLDTYTAPFIQAFFEDVATLNILPADTYPRATHYIPQMLEAIRKLLDDGIAYT 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKR---STPMEP 202
             +N + F   + P+YG  S+ ++   +  +RV  ++Y K+N +DF+LWK          
Sbjct: 113 GQDNSVYFSIKAFPSYGKLSQLQLQNLQCCSRVASDEYDKENLSDFVLWKAYDKKRDGHI 172

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            WESP+G+GRPGWH+ECS M+   LG   DIH GG+D IFPHHENEIAQS      +  +
Sbjct: 173 YWESPFGKGRPGWHLECSIMAMELLGSSIDIHAGGVDNIFPHHENEIAQSESLSH-QPFS 231

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             W+H+  L ++G+KMSKS GNF T+  LL+      R +    IR  +L +HYR  ++F
Sbjct: 232 RYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD------RGFSGEEIRYMLLQSHYRMQLNF 285

Query: 323 TVQRLTEAEILLSKW-----------PQTSTSKGIID-------PAVLSALYNDLNTVSA 364
           T + L      L +            P+++T    ID           +A+ NDLN  +A
Sbjct: 286 TEEGLIACRQALKRLRDFISRLESPYPESATISEDIDRCGQLFLQDFSNAIANDLNIATA 345

Query: 365 IQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           + +L     ++    D           +L I      +LG+      L   I   + +LV
Sbjct: 346 LASLFDFIHQTNSLIDKSNFTQADSNYVLDIMKKIDTVLGVIPFTTSLE--IPSEVAQLV 403

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +ER +  K K +  AD +R Q+ S G+++ED K+    ++
Sbjct: 404 EEREVARKEKNWKQADVLRNQIASLGYVIEDTKSGPKVKK 443


>gi|291456071|ref|ZP_06595461.1| cysteine--tRNA ligase [Bifidobacterium breve DSM 20213]
 gi|291382480|gb|EFE89998.1| cysteine--tRNA ligase [Bifidobacterium breve DSM 20213]
          Length = 549

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 155/544 (28%), Positives = 230/544 (42%), Gaps = 109/544 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +Y+T   +++ F  + P  + +YVCG TV    HIG+ R  + FD++ R       
Sbjct: 29  EGLNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY 88

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A                     ++F +    L  L PT +
Sbjct: 89  K--VTFVRNVTDIDDKILDKAATAGQRWWAR------AYYYEREFTEAYNTLGVLPPTVE 140

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK------ 169
           PRAT H+  MI LIQ I+ +GH Y            + FD +S P+YG  + +K      
Sbjct: 141 PRATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTAEVD 200

Query: 170 ---IDEQKMGTRVPEK--------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
                  +MG  V                   K +P DF LWK     +P    W +P+G
Sbjct: 201 EAAAVADRMGPSVDATGDDKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFG 260

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A     +A  W+H+ 
Sbjct: 261 VGRPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAA--GYPSAARWMHSA 318

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 319 WVTAKGEKMSKSLGTGLSVPSVLAEN-------SAWVVRYALGSVQYRSMLEWSDQALVE 371

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                     T  S   +    ++A+ +D+N   A  A+   
Sbjct: 372 AQAAYDRVSNFIERAGVALGGQPSREEVTGISADDLPTDFVAAMNDDVNVSGATAAIFTT 431

Query: 372 ARESTKNHDLLP-----------------IFNASAHILGIEVCKEHL------------- 401
            R        L                     A    LG++   E               
Sbjct: 432 IRSGNTLLSQLADRADSEAVQAEVRETLLAVRAMLDTLGLDPLAEPWVSAGAAGGASDGT 491

Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                +  +   I + +  R    K + F+ AD IR  L   G  +ED      G + + 
Sbjct: 492 TETPEHAALEALITEQLNARAEARKARDFAKADQIRDTLAEAGITIED------GLQGST 545

Query: 457 WKQK 460
           W  K
Sbjct: 546 WSLK 549


>gi|311897431|dbj|BAJ29839.1| putative cysteinyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 461

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 153/473 (32%), Positives = 235/473 (49%), Gaps = 43/473 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+++NTL ++  EF  + P  +RM+VCGPTVY  +H+G+A+    FD++ R L+    + 
Sbjct: 3   IRLHNTLTKRKEEFVTMTPGVVRMFVCGPTVYGLSHVGHAKTYTQFDLVARYLKKRGYQ- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY +N+TD+DDKII RA +      +      + ++  + ++ D   L         R
Sbjct: 62  -VTYAQNLTDVDDKIIRRANE------LGMDPRDLATEYEKHYLDDMAALHNTNVDVFGR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRVPEKY 183
           A +HI +++  +Q +I  GHAY  ++   +D ++ P YG  S R ++  +    RV E  
Sbjct: 115 AHDHIDEIVAQVQQLIERGHAYRLDDGWYYDLTTFPGYGKLSGRTEVKAEDSLARVDEND 174

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK   P EP W +  G GRPGWHIE +A++    G  +D+HGG +DLIFP
Sbjct: 175 QKRNPGDFALWKARKPGEPYWATALGEGRPGWHIEDTAITEALFGPQYDLHGGAVDLIFP 234

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE EIAQ   A  ++  A  W+H G L ++G KMSKS GNF+TI ++L+T  F      
Sbjct: 235 HHEAEIAQMEAASGLDPLARYWMHTGLLRVDGAKMSKSTGNFLTIRDILKTADF------ 288

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKGIIDP 349
              +R A L  HYR  ++     L +A     +               P ++        
Sbjct: 289 -RTLRYAFLSQHYRSSMELNDTTLEQARAARRRVENFARLIDRNHEDSPASAALARNARE 347

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHLNKN 404
           A+   L +DL+T  A+  L    RE  +  +      L +      +   +         
Sbjct: 348 AIFERLDDDLDTPGALAVLFDYIREQNRREEPPGTAALALLRELDELF--DAFDLDDRTT 405

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               IE L+  R  L + ++F  AD IRK L  +G ++ED  +       TRW
Sbjct: 406 DDAEIEALLARRRELRQARRFEEADEIRKTLHQRGIVIEDTPD------TTRW 452


>gi|298242724|ref|ZP_06966531.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297555778|gb|EFH89642.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 486

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 151/488 (30%), Positives = 234/488 (47%), Gaps = 48/488 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            K + IYNTL RK   FQ ++P  + +Y CGPTVY   H+GN R  ++ D L R+L Y  
Sbjct: 6   DKPVYIYNTLTRKRELFQPLNPPGVGIYSCGPTVYKDIHVGNFRTFMMTDWLRRMLEYNG 65

Query: 62  GEKCVTYVRNITDI-----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
            +  V  VRNITD+     DD      + E+ +     +   I  + T+Q+++D   L  
Sbjct: 66  YD--VYLVRNITDVGHLQNDDVESGEDKLEYEARTTGRSAYDIAQRYTEQYMRDAAELNI 123

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           L P   P+AT+HI +M+ + Q ++  G AY A+  + +D +  P YG  S   ++  + G
Sbjct: 124 LPPHLSPKATDHIGEMLEMTQALVEKGLAYIADGNVYYDVAHFPEYGKLSGNTVENLRAG 183

Query: 177 ----TRVPEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                ++     K++P DF LWK+     +  W SPWG G PGWHIECSAM++ YLG+ F
Sbjct: 184 GHGREQMEVAEDKRSPEDFALWKKGDEGRQMNWGSPWGSGFPGWHIECSAMATKYLGEQF 243

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-------------KM 278
           DIH GGLDL+FPHHE+EIAQS      E     W+H  FL +  R             KM
Sbjct: 244 DIHTGGLDLMFPHHEDEIAQSQGTFGKEP-VKYWVHGEFLIIGNRKMKASNENGDDSIKM 302

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           S+S GN + ++ L E              R  ML  HYR  I++T   +  A+  L+   
Sbjct: 303 SRSKGNVLLVSTLKE------EGIDPMAFRYLMLTAHYRSKINYTDDSIQAAQNALNNLR 356

Query: 339 QTSTSKGIIDP-------------AVLSALYNDLNTVSAIQALHKLARES-TKNHDLLPI 384
                  I +              A   A+ NDL+  +A+    +  R +  +  +   +
Sbjct: 357 DDLAELPITEQTANWSEEAQRVRDAFREAINNDLDLPTALVLTRETVRNAKIEPAERRHL 416

Query: 385 FNASAHILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                 +LG  ++  +      IS  ++++V++R      K +  +D +R +L++ GF +
Sbjct: 417 VLDFDRVLGLRLDTVEPKKPLEISDEVKEIVRQRDEARAAKNWKRSDQLRDELKALGFEV 476

Query: 443 EDYKNPDN 450
            D      
Sbjct: 477 RDTPRGTE 484


>gi|16082163|ref|NP_394604.1| cysteinyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|21264025|sp|Q9HJ27|SYC_THEAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|10640458|emb|CAC12272.1| probable cysteinyl-tRNA synthetase [Thermoplasma acidophilum]
          Length = 452

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 160/470 (34%), Positives = 242/470 (51%), Gaps = 40/470 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ YNTL R + EF+ ++   I M+VCGPTV D  HIG+AR  I FD + +LLR      
Sbjct: 1   MRFYNTLTRDVDEFKEMNSGRINMFVCGPTVQDHFHIGHARTYIFFDAVAKLLRNLGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII +AR+      +N     +     ++F++D + L   +  +  +
Sbjct: 59  SVFYLQNITDIDDKIINKARE------MNIQPQDVADMYLREFLEDMSALKVTSVNYFAK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           +T +I ++I  I  +I  G+AYE ++ + F+ S   +YG  S + +D+   G RV    +
Sbjct: 113 STLYINEIISQISRLIEKGYAYETSDGVYFEVSKFADYGQLSNQSLDQIIHGYRVAVNEN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK+  P EP W+SPWG GRPGWHIE +A++  Y G  +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKRKPGEPYWDSPWGPGRPGWHIEDTAITETYFGPEYDIHGGGSDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ       +  ++ WIH G +N+   KMSKS  NF+TI E+L       + +  
Sbjct: 233 HEAEIAQMRAISGRKYLSHYWIHTGMINVNNEKMSKSLKNFVTIREVL-------KEYRP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSAL 355
             +R A+L  +YR  +DF+   L E+   +     T         ++       AV+  +
Sbjct: 286 EDLRYALLNANYRTQLDFSKGLLEESRKQVEYLNSTFRKLVNASGNSDLSADPSAVIKRM 345

Query: 356 YN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN 402
            +    D +  S  + L   A +  KN +          + +F       GI + +    
Sbjct: 346 VDEATNDFDFRSVFRDLIDFAGDLNKNIESISRPAAQKAIDVFRWVDSFAGILLPE---T 402

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             +S  I+ L+  R  L   +KF  AD IR  L   G  +ED  +     
Sbjct: 403 ARLSGIIDDLLDLRKNLRTERKFQEADRIRDLLLKNGIHVEDRGDETIWW 452


>gi|167584729|ref|ZP_02377117.1| Cysteine--tRNA ligase [Burkholderia ubonensis Bu]
          Length = 467

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 154/462 (33%), Positives = 225/462 (48%), Gaps = 25/462 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R +  F AI   ++ +Y CGPTVYD AHIGN R  +  D+L R+L     
Sbjct: 1   MPLALYDTWSRTLRPFTAIHDDHVGLYCCGPTVYDHAHIGNLRTYVFEDILRRVLTRNGH 60

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           E  V +V NITD+     D      + E  S     +   I +  T  F  D   L  L 
Sbjct: 61  E--VRHVVNITDVGHLTSDADEGEDKLEKGSRRTGRSAWEIAAHYTDAFKADWRALNLLE 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P+   RAT+HI + I  I+ I   G+ Y  ++ + FDTS   +YG  +R      + G R
Sbjct: 119 PSIWCRATDHIAEQIAFIEEIERAGYVYRTDDGLYFDTSKQDDYGFLARLDRAGLQAGKR 178

Query: 179 VPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     K+N  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ YLG  FDIH 
Sbjct: 179 VAVGA-KRNATDFALWKFSPAEVRRQMEWDSPWGRGFPGWHIECSAMSAKYLGVWFDIHC 237

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D +  HH NEIAQ+  A      AN W+H  FL L+  KMSKSNG+F+ +  L +  
Sbjct: 238 GGEDHVAVHHSNEIAQTEAAHGTR-LANFWMHGHFLTLDATKMSKSNGDFVRLQTLRD-- 294

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIID 348
               R+      R   L  HYR  ++F    L  ++  L++       WP   ++     
Sbjct: 295 ----RNVDPLAYRYLCLTAHYRSKLNFNWTSLDASQTALNRLRQLYSGWPDGGSADAAFV 350

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN-KNISI 407
               + +  DLN   A+  L +L + +     L         +LG ++     +  ++  
Sbjct: 351 ARFDAEVDQDLNMPRALAVLWELVKSNLPPATLKATMENFDAVLGFKLRDWRPSASDVPE 410

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           A+  L+ ER      + ++ AD IR+ L+++G+ +ED K+  
Sbjct: 411 AVRALLGERERARAERNWARADEIRETLKARGWQIEDGKDGQ 452


>gi|269839611|ref|YP_003324303.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269791341|gb|ACZ43481.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 785

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 144/472 (30%), Positives = 224/472 (47%), Gaps = 33/472 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R++ E   ++P  IRMY CGPTVY + HIGN R     D + R L     E 
Sbjct: 1   MRLYNTLTRRVEEVVPVEPGRIRMYTCGPTVYRYIHIGNLRSFCTADWIRRALLREGYE- 59

Query: 65  CVTYVRNITDIDDK-----IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
            V +V+NITD+             + E  +  +      I    T+ F++D  R+  L  
Sbjct: 60  -VIHVKNITDVGHMRQELLDQGEDKLEAEARRVGRTPGEIAEFYTRAFMRDEARMNILPA 118

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           +  PRAT H+ +MI +++ +   G+AY A   + FD + +P YG  S   + E    ++ 
Sbjct: 119 SVFPRATQHVGEMIEIVRELERQGYAYRAGGNVYFDVARLPQYGQLSGNSLPEL-TSSQE 177

Query: 180 PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
                K++P DF LWK + P     W+SPWGRG PGWHIEC+AM+  YLG   DIH GG+
Sbjct: 178 DATADKRSPLDFALWKEAEPGRLMAWDSPWGRGFPGWHIECTAMAIKYLGTEIDIHTGGV 237

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           D IFPHHENE AQS       +    W+H   L  +G KMSKS  N  T+++++      
Sbjct: 238 DNIFPHHENERAQSEAYVG-HRWVRHWVHTQHLLTDGLKMSKSMSNDYTLDDIV------ 290

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
            R +    +R      HYR  ++FT + L  A+  L +    + +               
Sbjct: 291 ARGFEPLALRYLFTTAHYRTRLNFTFRALAGAQTSLRRLRMAALAARDEAVAPPDEEAMR 350

Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
               A   +L +DLN  +A+  +  +  R      +   +      +LG++V  E  +  
Sbjct: 351 PWREAFDRSLRDDLNLPAAMAVVWDVVRRSGLGPAERAALLAEFDEVLGLDVFAEPDSGL 410

Query: 405 I---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
           +      + +L+  R  +     ++ AD +R  LE++G  L D +      R
Sbjct: 411 LLEPRQDVRELLALRAEVRARGDYALADALRSDLEARGVELRDTRQGTRAYR 462


>gi|306823683|ref|ZP_07457058.1| cysteine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|309802923|ref|ZP_07697024.1| cysteine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
 gi|304553390|gb|EFM41302.1| cysteine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
 gi|308220390|gb|EFO76701.1| cysteine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
          Length = 557

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 153/544 (28%), Positives = 231/544 (42%), Gaps = 109/544 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+Y+T    ++ F  + P  + +YVCG TV    HIG+ R  + FDV+ R  +    
Sbjct: 37  TGLKLYDTASHTVSSFVPLKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFQRLGY 96

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +T+VRN+TDIDDKI+++A                     ++F +    L    PT++
Sbjct: 97  K--ITFVRNVTDIDDKILDKAAAAGQQWW------ERAYIYEREFTEAYDALGVEPPTYE 148

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK------ 169
           PRAT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K      
Sbjct: 149 PRATGHMIDMIDLIRKIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVSD 208

Query: 170 -----IDEQKMGTRVPEK------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
                 D                         K +P DF LWK     +P    W +P+G
Sbjct: 209 DASKITDAMGPSVDNAGDDKYNPIDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFG 268

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ 
Sbjct: 269 TGRPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGYDS--AARWMHSA 326

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 327 WVTAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLAE 379

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                      + S   +    ++A+ +D+N   AI A+   
Sbjct: 380 AQSAYDRVANFIERAGAAVGEQPSHDEIAAISADALPADFVAAMNDDINVSGAIAAIFTA 439

Query: 372 ARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL------------- 401
            R                       + L    A    LG++   E               
Sbjct: 440 IRSGNTLLSKLADRADSDAAKAEVREALVNVRAMLDTLGLDPLAEPWVNGGVAGGAAGAA 499

Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                +  +   + + + ER    K K F+ AD IR  L + G  +ED      G + + 
Sbjct: 500 ADSAEHAALDKLVSEQLAERAEARKSKDFARADAIRNALNAAGIAIED------GPQGST 553

Query: 457 WKQK 460
           W  +
Sbjct: 554 WSLQ 557


>gi|78061440|ref|YP_371348.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
 gi|109894878|sp|Q39A07|SYC1_BURS3 RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|77969325|gb|ABB10704.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 470

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 155/463 (33%), Positives = 223/463 (48%), Gaps = 26/463 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R +  F  I    + MY CGPTVYD AHIGN R  +  D+L R+L     
Sbjct: 1   MPLALYDTWSRTVRPFTPIRAGQVGMYGCGPTVYDDAHIGNLRTYVFEDLLRRVLERNGY 60

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V +V NITD+     D      + E  S    ++   I  + T+ FV+D   L  L 
Sbjct: 61  --AVRHVVNITDVGHLTSDADEGEDKMEKGSRRTGESAWAIARRYTEAFVRDWHALNLLE 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PT   RAT+HI + I  I+ +   G+ Y  ++ + FDTS   +YG  +R      + G R
Sbjct: 119 PTIWCRATDHIAEQIAFIETLDRAGYVYRTDDGLYFDTSRQDDYGYLARLDRAGLQAGKR 178

Query: 179 VPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     K++  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ YLG +FDIH 
Sbjct: 179 VALG-GKRSITDFALWKFSPADVQRQMEWDSPWGRGFPGWHIECSAMSAKYLGTLFDIHC 237

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLET 294
           GG D I  HH NEIAQ+  A    + AN W+H  FL L+   KMSKS+G+F+ +  L   
Sbjct: 238 GGEDHIAVHHSNEIAQTRAAHGT-QLANYWMHGHFLTLDVHTKMSKSSGDFVRLQTLQR- 295

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGII 347
                R       R   L  HYR  + FT + L  A+  L++       WP         
Sbjct: 296 -----RGVDPLAYRYLCLTAHYRSKLHFTWESLDAAQTALNRLRHLYIGWPDGGRVDADF 350

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH-LNKNIS 406
                + +  DLN   A+  L  L R +     L    ++   +LG+ + +   +  ++ 
Sbjct: 351 AARFDAEVNEDLNLPRALAVLWDLVRSNLPPATLKATVDSFDMVLGLGLREWRPVAVDVP 410

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             +  L+ ER      K ++ AD IR+ L ++G+ +ED     
Sbjct: 411 EHVRALLGERARARAEKDWAQADRIREALSAEGWRVEDTPEGQ 453


>gi|225022147|ref|ZP_03711339.1| hypothetical protein CORMATOL_02180 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945080|gb|EEG26289.1| hypothetical protein CORMATOL_02180 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 445

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 149/460 (32%), Positives = 217/460 (47%), Gaps = 55/460 (11%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MY+CG T     HIG+ R  + FD++ R L     +  V +VRN+TDIDDKI+ +A +  
Sbjct: 1   MYLCGATPQTNPHIGHVRSGVAFDIVRRWLMASGYD--VAFVRNVTDIDDKILTKAAE-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N       S   + F      L  L P+ +PRAT H+ QMI  +Q +I  G AY 
Sbjct: 57  ----ANRPWWEWVSTYERAFSHAYDMLGVLPPSVEPRATGHMTQMITYMQRLIDAGFAYP 112

Query: 148 ANNEIIFDTSSIP-----NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
           A   + FD ++       +YGS S   + + + G    +   K++P DF LWK + P EP
Sbjct: 113 AQGSVYFDVAAWSAADGSDYGSLSGNNLVDMEQGET--DNVGKRSPQDFALWKAAKPGEP 170

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W +PWG GRPGWH+ECSAMS+ YLG  FDIHGGGLDL FPHHENEIAQ+  A      A
Sbjct: 171 SWPTPWGDGRPGWHLECSAMSTWYLGPEFDIHGGGLDLQFPHHENEIAQAHAAGDG--FA 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             W+HN ++ + G KMSKS GN +++ E+++  +          +R  +   HYR  +++
Sbjct: 229 RYWMHNHWVTIAGEKMSKSLGNVLSVPEIVKLVR-------PVELRYYLGSAHYRSVLEY 281

Query: 323 TVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           +   L EA     +             Q     G    A   A+ +D+    A+  +H  
Sbjct: 282 SPDALQEAAQGYRRIETFVEKVDDLPGQPPVPVGEWTDAFAEAMNDDIGVPRALAEIHNT 341

Query: 372 ARESTKNHDLLP---------IFNASAHILGIEVCKEHLNKNIS-------IAIEKLVQE 415
            R       +              A   +LG +   +      S       +A++ LVQE
Sbjct: 342 VRAGNSALAMRDYGEARRMAARVRAMTEVLGFDPLSDQWQDGESVRFDAPMVALDALVQE 401

Query: 416 ----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
               R I   +K + +AD +R +L   G I+ D       
Sbjct: 402 ELNRREIARSVKDWETADAVRDRLLEVGIIVTDTPEGPTW 441


>gi|154148402|ref|YP_001406167.1| cysteinyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166200141|sp|A7I0X6|SYC_CAMHC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|153804411|gb|ABS51418.1| cysteinyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 468

 Score =  455 bits (1170), Expect = e-126,   Method: Composition-based stats.
 Identities = 154/480 (32%), Positives = 236/480 (49%), Gaps = 52/480 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + I++++ +K  EF  ++   +R+YVCGPTVYD AH+G+A+  I FD+L R L     + 
Sbjct: 1   MVIFDSVVKKKLEFIPLENDFVRIYVCGPTVYDDAHLGHAKSAISFDLLRRTLVALGFK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKI+++            ++  IT     +++ D   L  L    +PR
Sbjct: 60  -VKFVKNFTDIDDKILKK------MEDSGKSLKEITEFYISRYLDDMNALNVLRADIEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  I ++I  ++ ++ +G AY+   + I FDTS   +Y S S +K  ++ +  RV    
Sbjct: 113 ATECIDEIIEFVEELLDNGAAYKIQGDGIYFDTSKDSDYLSLSGKKDSDENI-ARVASNA 171

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
            KK+  DF LWK     E  +++ +G GRPGWH EC  M   YL         DIH GG+
Sbjct: 172 QKKDEKDFALWKF---DEKYYKAKFGCGRPGWHTECVVMIKKYLTDNKQKYLIDIHAGGM 228

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ  CA+  +  A  W+HNGF+ +   KMSKS GN   I + L      
Sbjct: 229 DLLFPHHENEAAQCRCAEH-KNLAKYWMHNGFVQVNNEKMSKSLGNSFFIKDAL------ 281

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV-- 351
            +  P   +R  ++ +HYR   +++V  L  ++  L K  +         KGI D     
Sbjct: 282 -KIVPGEALRFYLMSSHYRANFNYSVNDLFSSKKRLDKIYRLKKRLQGAKKGISDEKFKA 340

Query: 352 --LSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGIEVCK 398
             L AL +DLNT  A+  +  +   +            K  ++L   +     LGI    
Sbjct: 341 EILDALSDDLNTSLALSIVDSMVNSANERLDKNPKDKMKKGEILANLDFVKETLGILYTD 400

Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           E+L      ++     I  L+ +R    K K F+ AD IR++L  +   L D  N    +
Sbjct: 401 ENLYFQFGVSETKKAEISDLIAQRDAAKKEKNFALADEIREKLALQNITLMDTPNGTVWE 460


>gi|224542354|ref|ZP_03682893.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524736|gb|EEF93841.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
           15897]
          Length = 468

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 154/468 (32%), Positives = 231/468 (49%), Gaps = 52/468 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL  K  EF+ I+   + +Y+CGPTVY+ AHIGN RPMIVFDVL R   Y     
Sbjct: 22  MRLFNTLTNKKEEFKPIEEGKVSIYICGPTVYNHAHIGNTRPMIVFDVLRRTFEYLG--N 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V N TD+DDKII+ A+ E            +T K  + +      L    PT++PR
Sbjct: 80  DVTFVSNYTDVDDKIIKAAKAE------GITEKELTDKYIKAYEDVRAGLNIEDPTYKPR 133

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---- 180
            T  +P++I  IQ +I  G+AYE + ++ F  + +  YG  S  K+++   G        
Sbjct: 134 VTETMPEIIDFIQALIDKGYAYEVDGDVYFRVTKVKEYGMLSGIKVEDLIAGASDRTLSV 193

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGLD 239
           +   K++  DF LWK++      +++PW +GRPGWH EC  M +        DIHGGG D
Sbjct: 194 DDKKKESTTDFALWKKTDEG-IQFDTPWSKGRPGWHTECVVMINKLFKDGKIDIHGGGQD 252

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENEIAQS   +     AN W+HN  +N++G KMSKS GN +   +L+       
Sbjct: 253 LKFPHHENEIAQSMAYNG-HPIANYWMHNQMINIDGEKMSKSLGNVLWAKDLIV------ 305

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------K 344
             +   V +  ML THYR P++ TV  +      +SK    + +               K
Sbjct: 306 -EFGCNVFKWLMLSTHYRNPLNLTVDVIAGVRKEVSKVENATKNASLYLQVNHVPAHDYK 364

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLL----PIFNASAHILG 393
                A+++AL +DLNT  A+  +    +          K++D++            +LG
Sbjct: 365 KETVDAMVNALEDDLNTSLALTQILDQVKVLNQVMRVREKDNDVIATEYATLVKMGDVLG 424

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
                  L++        L +E     K K F  AD +RK+L  +G +
Sbjct: 425 FLFEGTKLSEEDI----ALYEEWNAYKKEKNFDEADRVRKELTERGIL 468


>gi|218283691|ref|ZP_03489652.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
 gi|218215680|gb|EEC89218.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
          Length = 443

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 161/464 (34%), Positives = 233/464 (50%), Gaps = 48/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+  + I E + I+   I MYVCGPTVY++ HIGNARP++VFD L + L     E 
Sbjct: 1   MKLYNSYSQTIEELKPIEEGKISMYVCGPTVYNYPHIGNARPIVVFDTLKKALSAQGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+  N TD+DDKII+ A      I  N +   IT K    +      L    P + PR
Sbjct: 60  -VTFASNYTDVDDKIIKTA------IEQNVSEKEITDKFIAAYNDVRRGLHADLPDYAPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T  + ++I  I  ++ +G AY+   ++ F  +S   YG  S + ID+  +G R+ E   
Sbjct: 113 VTETMDRIIEFIDKMVKNGSAYQVGGDVYFRVNSDKKYGELSHQSIDDLMVGARIDENEK 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGLDLIFP 243
           K+NP DF LWK +T     W+SPW +GRPGWH EC  M      K   DIHGGGLDL FP
Sbjct: 173 KENPLDFTLWKETTEG-IKWDSPWSKGRPGWHTECVVMIQDVFKKTLIDIHGGGLDLKFP 231

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQ    +     ANIW+HNG +N+ G KMSKS GN     +L+           
Sbjct: 232 HHENEIAQCEVCNDTH-LANIWVHNGMININGIKMSKSLGNVWWAKDLIANHG------- 283

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------STSKGIID 348
             + R  M+ THYR P++   +    ++  L K                   +T+     
Sbjct: 284 GNLTRWLMISTHYRAPLNLNEEAFATSKKELDKIAAAYKQACVKLVLSSAQEATTFDETY 343

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVC 397
            A + AL +DLNT +AI  +++L ++  +              L+       +ILGIE  
Sbjct: 344 TAFIDALNDDLNTPNAISVVYELVKKINQAVRQREIDVENLAVLVHTLEKMLYILGIEFD 403

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K     +++   +++ Q     +K K F +AD +R+ L  KG +
Sbjct: 404 K----VSMTNEDKEMYQNWRSAVKEKDFKTADTLRQTLIEKGIL 443


>gi|88608185|ref|YP_506222.1| cysteinyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|109894911|sp|Q2GE74|SYC_NEOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|88600354|gb|ABD45822.1| cysteinyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 507

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 176/515 (34%), Positives = 242/515 (46%), Gaps = 88/515 (17%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K++++NTL     EF  +    +RMYVCGPTVYD  HIGN R  +V+D++YR+L   + 
Sbjct: 1   MKLRVHNTLSGLKEEFFPLSSEVVRMYVCGPTVYDVPHIGNIRASVVYDIVYRVLLKLFP 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRNITD+DDKII  A               +       F +    L CL+PT +
Sbjct: 61  E--VIYVRNITDVDDKIITAASVRGVK------CDKVALHYEHIFHEHLGLLNCLSPTVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT +I +MI +IQ +I +G+AY     + FD  S   YG  S+RK ++   G RV + 
Sbjct: 113 PKATQNIGKMISMIQALIDNGNAYSVGGNVYFDVGSFAEYGVLSKRKKEQLVYGVRVEKD 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P DFILWK  +     W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL F
Sbjct: 173 VDKKHPGDFILWK--SDDHVYWPSPWGNGRPGWHIECSAMTLATLGADFDIHGGGADLKF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS CA+   + A  W+HNGFL + G KMSKS GN + ++ L+E+        
Sbjct: 231 PHHENERAQSMCANPGSQFARYWVHNGFLTVNGEKMSKSLGNVVNVDTLVES------GV 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
              VIR  ++ THY +P+D+    + EA   L K+       G++  +            
Sbjct: 285 TPNVIRFVLISTHYSKPLDWNDAMVGEAINSLIKFKLALLDSGVLPKSKSHIGSLNIGVC 344

Query: 351 -----------------------------VLSALYNDLN--------------------- 360
                                            +    N                     
Sbjct: 345 SDNAEDEEVDPRSCASEVIVARNKRKAKNFSKKMNEIFNKFGGLGDDCSIYTREFFECMA 404

Query: 361 ----TVSAIQALHKLAR-----ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
               T  AI  LHKL+       + K ++L  +       LGI++     +      I  
Sbjct: 405 DDFNTPGAIAVLHKLSDGVRLVGAEKVNNLAHLLYNLLIFLGIDLGVRQ-SSVSEDFIRS 463

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +Q+R    + K F  AD IR  L   G ++ D+K
Sbjct: 464 QLQKRADCKRQKDFVEADRIRFALAKMGVLIRDHK 498


>gi|313902850|ref|ZP_07836247.1| cysteinyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313466970|gb|EFR62487.1| cysteinyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 529

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 138/358 (38%), Positives = 197/358 (55%), Gaps = 24/358 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+IYNTL  +   F+ ++P  +RMY CGPTVYD+ H+GN R  + FDV+   L Y     
Sbjct: 3   IQIYNTLTGQKEPFEPLEPGRVRMYNCGPTVYDYFHVGNLRTFLFFDVVRGWLEYRGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDK+I RA +         ++  +  +  + + +D   L  +     PR
Sbjct: 61  RVRYIQNFTDIDDKLIRRAAER------GISVKELADEQIRAYFEDADALGIVRADVHPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +  I  +I LIQ +I  G+AY AN ++ FD S   +YG  S ++ ++   G RV    +
Sbjct: 115 VSEKIGAIIGLIQRLIDQGYAYVANGDVFFDVSRFRDYGKLSGQRTEQLLAGARVEASEN 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK   P EP W+SPWG GRPGWHIECSAM+   LG   DIH GG DL+FPH
Sbjct: 175 KRNPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMAMDELGTTLDIHSGGSDLVFPH 234

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A   +  A  W+H   + + G++M KS GNF  + +L          +  
Sbjct: 235 HENEIAQSEAATG-QPFARYWMHVALVQVGGQRMGKSMGNFWRVRDLRAR-------FHP 286

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLSA 354
             IRL +L  HYR P++F+++ L +AE    +            + +    +PA  +A
Sbjct: 287 EAIRLFILSAHYRNPLEFSLEALEQAERARQRLTNFIAHLEHLLAVAPAGDEPAARAA 344



 Score = 94.5 bits (234), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 18/131 (13%)

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
                       A+ +D NT  A+ AL  LAR+  K              L +       
Sbjct: 393 ARLAQARAEFEQAMDDDFNTADALAALFTLARDGHKALGPGSPRAWIQATLDLIRDLGRP 452

Query: 392 LGIE--VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           L +           +    ++ LV+ R     ++ +  AD IR +L   G+ILED     
Sbjct: 453 LRLFRTGAAGEPAGDAQALLDLLVEVRQYARSIRDYELADRIRDRLAELGYILEDT---- 508

Query: 450 NGQRMTRWKQK 460
                TR +++
Sbjct: 509 --PAGTRVRRR 517


>gi|317123115|ref|YP_004103118.1| cysteinyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315593095|gb|ADU52391.1| cysteinyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 518

 Score =  454 bits (1168), Expect = e-125,   Method: Composition-based stats.
 Identities = 134/340 (39%), Positives = 188/340 (55%), Gaps = 16/340 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYNTL  +   F+ ++P  +RMY CGPTVYD+ H+GN R  + FDV+   L Y   
Sbjct: 1   MGIQIYNTLTGQKEPFEPLEPGRVRMYNCGPTVYDYFHVGNLRTFLFFDVVRGWLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N TDIDDK+I RA +          +  +  +  + + +D   L  +     
Sbjct: 61  --RVRYVQNFTDIDDKLIRRAAER------GITVKELADEQIRAYFEDADALGIVRADVH 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR +  I  +I LI+ +I  G+AY A  ++ FD     +YG  S +K ++   G RV   
Sbjct: 113 PRVSEKIGAIIALIRRLIDQGYAYVAGGDVFFDVERFRHYGKLSGQKTEQLLAGARVEAA 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K+NP DF LWK   P EP W+SPWG GRPGWHIECSAM+   LG+  DIH GG DL+F
Sbjct: 173 ENKRNPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMAMDELGQTIDIHSGGSDLVF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS  A   +  A  W+H   + + G++M KS GNF  + +L          +
Sbjct: 233 PHHENEIAQSEAATG-KPFARYWMHVALVQVGGQRMGKSMGNFWRVRDLRAR-------Y 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               IRL +L  HYR P++F+++ L +AE    +      
Sbjct: 285 HPEAIRLFILSAHYRNPLEFSLEALDQAERARQRLANFIA 324



 Score = 87.2 bits (215), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 12/112 (10%)

Query: 355 LYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIE--VCKEHLN 402
           + +D NT  A+ AL  LAR+  K              L +       L +   V +E   
Sbjct: 397 MDDDFNTADALAALFTLARDGHKVLGPDSPRPWIQATLDLVRELGGPLRLFRTVAREEPA 456

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            +    ++ LV+ R     ++ +  AD IR +L   G+ LED       +R 
Sbjct: 457 GDAQALLDLLVEVRQYARSVRDYELADRIRHRLAELGYWLEDTPAGTRVRRG 508


>gi|319937669|ref|ZP_08012072.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807104|gb|EFW03718.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 445

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 165/467 (35%), Positives = 236/467 (50%), Gaps = 52/467 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL  K  EF  I    + +YVCGPTVYD AHIGNARP+IVFD+L R   Y   + 
Sbjct: 1   MKVFNTLTNKKEEFVPIKQGEVSIYVCGPTVYDHAHIGNARPLIVFDILRRTFEYLGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V N TD+DDKII+ A++E            +T K  + +    + L  L PT+ PR
Sbjct: 60  -VTFVSNFTDVDDKIIKAAKEE------GITEKELTDKYIKAYNDIRSGLNLLFPTYSPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEK 182
            T  +  +I  IQ+++  G AYE + ++ F  + I  YG  S  K+++   G   RV E 
Sbjct: 113 VTETMQPIIDFIQSLVDQGFAYEVDGDVYFRVTKINEYGMLSGIKVEDLIAGASERVDEN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGLDLI 241
             K++  DF LWK++      +ESPW +GRPGWH EC  M +        DIHGGG DL 
Sbjct: 173 DKKESSTDFALWKKTDEG-IQFESPWSKGRPGWHTECVVMINDIFDDGRIDIHGGGQDLK 231

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS         AN+W+HN  +N++ +KMSKS GN +   +L+ET       
Sbjct: 232 FPHHENEIAQSMACHH-HPIANVWMHNQMINIDNQKMSKSLGNVLWAKDLIETLG----- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKG 345
               V +  ML THYR P++FT + LT  +  + K                + Q   SK 
Sbjct: 286 --CNVFKWLMLSTHYRNPLNFTEEVLTSVKKEVEKVENVLKQTSLYLQVQHYQQEEYSKE 343

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNASAHILGI 394
            +D  V  AL +DLNT  A+  +    +   ++  +                    ++G 
Sbjct: 344 TVDTMV-EALSDDLNTSLALTQILNQVKVLNQSMRVKDKDNQVISREYQTLIQMLDVMGF 402

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
               + L+ N  +  EK ++E       K F  AD +R QL+ +G I
Sbjct: 403 VHEMKQLSDNDIVLYEKWLEE----KANKNFDKADELRGQLQMRGII 445


>gi|41614851|ref|NP_963349.1| hypothetical protein NEQ055 [Nanoarchaeum equitans Kin4-M]
 gi|61216257|sp|Q74MI1|SYC_NANEQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|40068575|gb|AAR38910.1| NEQ055 [Nanoarchaeum equitans Kin4-M]
          Length = 457

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 158/472 (33%), Positives = 234/472 (49%), Gaps = 45/472 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL  +   F  ++   ++MY CG T YD AH+G+ R  +V D+L R+LR+     
Sbjct: 2   LYLYNTLTSRKEAFIPLEEPFVKMYTCGVTPYDKAHVGHLRTYLVTDLLRRILRFLGYYD 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
               V N TDIDDKII+++++      +N     I  +N +        L  L     PR
Sbjct: 62  IA--VTNFTDIDDKIIKKSQE------LNKDWKEIVEENIKYVFDVLKELKVLPFYVYPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T HI  +   +++++  G+AY+    I FD    P YG  S  K  ++    +   +  
Sbjct: 114 VTYHIDDIANAVKSLLDRGYAYKGKYSIYFDVDKYPYYGQLSGIKSKKEWEQEKHLLED- 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKNP DF LWK   P EP W +  G GRPGWHIECS MSS YLG+ FDIH GG DLIFPH
Sbjct: 173 KKNPYDFALWKFKQPGEPYWNTIVGEGRPGWHIECSVMSSKYLGERFDIHLGGSDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS     +      W+H G + + G KMSKS GN I   E +       + +  
Sbjct: 233 HENEIAQSETLYNVHPWVRYWVHIGMVQINGEKMSKSLGNIIEAKEFI-------KKYKP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAV------------ 351
             +R  +L THYR+P+D + + + +A+ +  K     +T+K I++  V            
Sbjct: 286 EFVRFFLLSTHYRKPLDISEENIEQAQTIYKKLTDAYNTAKSIVENEVSYRFDKDVRIIL 345

Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKE 399
                 + A  +D+NT +AI +L+K+     +N +       L  F     I+ +   K 
Sbjct: 346 DYYREMIKAFLDDMNTPTAIASLNKIVSIFNQNPEYPIAYLTLRAFEDFNRIMNVWFEKP 405

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                I+  IE       +L + K++  AD IR  L+ KG  ++DYK+    
Sbjct: 406 IDLDIINEIIEIR----NMLRREKQYELADKIRDILQKKGIKIKDYKDKTVW 453


>gi|88603422|ref|YP_503600.1| cysteinyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88188884|gb|ABD41881.1| cysteinyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 423

 Score =  453 bits (1167), Expect = e-125,   Method: Composition-based stats.
 Identities = 166/444 (37%), Positives = 242/444 (54%), Gaps = 32/444 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL R +  FQ + P  + ++VCGPTVY++ H+G+AR  +VFDVL + LR+   E 
Sbjct: 1   MQLYSTLSRMVEPFQTLYPDRVSLFVCGPTVYNYPHLGHARTYVVFDVLAKYLRWTGQE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITD+DDKII RA++E        +   +  K  ++++KD   L   + ++  R
Sbjct: 60  -VLYIQNITDVDDKIINRAQEEK------ISQKDLARKFEREYIKDMLSLGIDSVSYHAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT HIP++I  I+ ++  G  Y     + F+  S P  G  S +  D++   +RV +   
Sbjct: 113 ATTHIPEIINQIERLVGIGVGYITETGVYFNIDSFPRNGELSGQSKDKRI--SRVTDT-K 169

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NPADF+LWKR    E  W+SPWGRGRPGWHIE +A++  Y G+ +DIHGGGLDLIFPH
Sbjct: 170 KHNPADFVLWKRGEYGEYTWDSPWGRGRPGWHIEDTAITEKYFGQQYDIHGGGLDLIFPH 229

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ    +        W+H GFL +EG KMSKS GNFI I + L       ++W  
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWMHTGFLTVEGEKMSKSLGNFIKIQDAL-------KTWDK 282

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----AVLSALYNDLN 360
            +IR  +L++HYR P+  + + L  A+  L      + +     P    A ++A+ +DLN
Sbjct: 283 DIIRYFILLSHYRSPLQVSEEGLLNAKKALEHIRAIAITDNGPYPEGRDAFIAAMESDLN 342

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           T +        A  +   H  L        ILGI    E      S  +  L   R  L 
Sbjct: 343 TPN-----AIAAIHALAAHGDLEALIEYGEILGIRFLPE-----TSAPLSILQDIRAELR 392

Query: 421 KMKKFSSADYIRKQLESKGFILED 444
             K+F  AD IRK++   G  + D
Sbjct: 393 ASKQFEIADMIRKKIADAGIQVTD 416


>gi|84498461|ref|ZP_00997231.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84381204|gb|EAP97088.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 465

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 153/480 (31%), Positives = 227/480 (47%), Gaps = 55/480 (11%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
            +F  + P  + +Y+CG T     HIG+ R  + FDVL R L        V  VRN+TD+
Sbjct: 2   RDFVPLQPGRVGIYICGLTTQAPPHIGHVRFAVAFDVLRRWL-VRGHGLDVALVRNVTDL 60

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DDKI+ ++ +        +    ++ +N     +  T L  L PT++PRA  HI +M+ L
Sbjct: 61  DDKILRKSAES------GEDWFALSYRNEVATSEALTLLGVLPPTYEPRAMGHITEMVEL 114

Query: 136 IQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
           I+ +I +GHAY A     ++ FD  S P YG  + +KID+         +  K++P DF 
Sbjct: 115 IEVLIANGHAYAAEDGSGDVYFDVRSWPAYGEVTNQKIDDMAAAEDADPR-GKRDPRDFA 173

Query: 193 LWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           LWK     EP    W +PWGRGRPGWH+ECSAM+  YLG  FDIHGGG+DL FPHHENE 
Sbjct: 174 LWKGRKDGEPETASWPTPWGRGRPGWHLECSAMARKYLGDAFDIHGGGVDLRFPHHENEQ 233

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS  A      A++W+HN ++ + G KMSKS GN + I+E+ +  +          +R 
Sbjct: 234 AQSRAA--GLPFASLWMHNAWVTISGEKMSKSLGNSLLIHEVTKKAR-------PLAVRY 284

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------TSTSKGIIDPAVLSALYN 357
            +   HYR  I+F    L EAE  + +               T T    +    + A+ +
Sbjct: 285 YLTAAHYRSMIEFHEGSLAEAEAAVDRIEGFLRRALGPDSAVTPTGDEKLPVEFVEAMDD 344

Query: 358 DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL------- 401
           DL    A+ A+H    +     D         L  +  A   ILG+              
Sbjct: 345 DLGVSGALAAIHDTVTQGNTALDDGENDTARELAALVIAMTDILGVNPLDPAWAGADNSS 404

Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                 +   + + +  R      + ++++D IR QL S G  +ED         +TR +
Sbjct: 405 SDAQSALDALVSERLAARTSARSARDYATSDAIRDQLISAGITIEDTPTGARWS-LTRGR 463


>gi|322378637|ref|ZP_08053073.1| cysteinyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148944|gb|EFX43408.1| cysteinyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 475

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 158/497 (31%), Positives = 243/497 (48%), Gaps = 61/497 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I ++++  ++   F  +    +++Y+CGPTVYD++H+G+AR  IVFD+L R+L   
Sbjct: 1   MHPPIYLFDSHHKQKRPFVPLKAPKVKIYICGPTVYDYSHLGHARSAIVFDLLTRMLTLS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+N TDIDDKII +A QE  +I      + ++ +    ++++   L  L PT
Sbjct: 61  GY--SVEIVKNFTDIDDKIISKALQEGVNI------TDLSRRFIASYLEEMQALGVLRPT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P+A+ H+  +  +I+ ++  G+AY+     I  DT     YGS S   ++ + + +R+
Sbjct: 113 SEPKASEHLEAIEDMIKRLLEKGYAYQTKEGSIYLDTRLDSAYGSLSAHSLEAENV-SRI 171

Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDI 233
            +   K +P DF LWK      + G+ S +G+GRPGWHIECSAM ++ L         DI
Sbjct: 172 EDNLEKHHPQDFALWKTYKGEGDLGYLSAFGKGRPGWHIECSAMIANTLAYLDEPYQIDI 231

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG DL FPHHENE  Q+ CA   E  A  WIHNGF+N+ G+KMSKS GN   I + L 
Sbjct: 232 HGGGSDLFFPHHENEACQTRCAFNQE-LAQFWIHNGFVNISGQKMSKSLGNSFYIKDAL- 289

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTST 342
                 + +   V+R  +L  HY   + F  + L   +  L K            P+ S 
Sbjct: 290 ------KVYDGEVLRNYLLGVHYSAILHFNEEDLNSQKKRLDKLYRLKKRTLEISPEKSK 343

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNAS 388
           S      A+L A+ +DLN   A+  L +  +ES ++ D              +L      
Sbjct: 344 SNQNFQHALLQAMQDDLNISKALSILEEYLQESNQSLDNASSKTNKKKCAQEILENLTFI 403

Query: 389 AHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
             +LG+      L      +  +   I   +  R    + K F+ AD IRK L  +G  L
Sbjct: 404 DQLLGLGGKDPTLYFQLGVDTALKDKITTQILRRQKAKEAKDFALADSIRKDLAQQGISL 463

Query: 443 EDYKNPDNGQRMTRWKQ 459
            D          T W++
Sbjct: 464 MDT------PSGTIWEK 474


>gi|217032936|ref|ZP_03438411.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
 gi|216945346|gb|EEC24018.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
          Length = 462

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 152/478 (31%), Positives = 231/478 (48%), Gaps = 56/478 (11%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           K   F+ +  +   +YVCGPTVYD AH+G+AR  I FD+L R L     E  V  VRN T
Sbjct: 7   KKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--VVLVRNFT 64

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
           DIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++  M+
Sbjct: 65  DIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMV 118

Query: 134 YLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
            +I+ ++    AY  +N +I  DTS   +YGS S           R+     K+   DF+
Sbjct: 119 GMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFV 176

Query: 193 LWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHE 246
           LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FPHHE
Sbjct: 177 LWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHE 236

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
           NE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   + + L       +++   +
Sbjct: 237 NEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL-------KNYDGEI 288

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV----LSALYND 358
           +R  +L  HYR  ++F  + L  ++  L K  +       + G I+P      L  + +D
Sbjct: 289 LRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQDD 348

Query: 359 LNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHL------ 401
           LN   A+  L  +   + +  D           +L        +LGI             
Sbjct: 349 LNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPSAYFQLGV 408

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +++    IE  ++ER      K F  AD+IR++L  +   L D        + T W++
Sbjct: 409 SESEKQEIENKIEERKRAKAQKDFLKADHIREELLKQKIALMDT------PQGTIWEK 460


>gi|27904909|ref|NP_778035.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|27904307|gb|AAO27140.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 469

 Score =  453 bits (1165), Expect = e-125,   Method: Composition-based stats.
 Identities = 165/472 (34%), Positives = 226/472 (47%), Gaps = 44/472 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +KI+N+  R   + +      I MYVCG T YDF HIG+ R  I FDV+ R LR   
Sbjct: 4   NTMLKIFNSYTRLQEQLEVDKKKTINMYVCGITAYDFCHIGHGRTFIFFDVVVRYLRSLG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               + YVRNITDIDDKII  +      +  N++   ++++       D + L  L P  
Sbjct: 64  Y--ALKYVRNITDIDDKIIAAS------LKNNESYISLSNRMISNMKDDFSALNILPPDS 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +PR T +I  +I  I  ++   HAY A N +I+F  SS  NYG+ S +          + 
Sbjct: 116 EPRVTENISDIIKFISILLNKKHAYVACNGDIMFSVSSYLNYGALSNQFSKILNKEINIS 175

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               KKN ADF LWK S   +  GW SPWG GRPGWHIECS+M         DIHGGG+D
Sbjct: 176 HYSTKKNIADFALWKTSKSSIFVGWNSPWGNGRPGWHIECSSMCRSAFKNKIDIHGGGVD 235

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE+AQS C D        W+H G + +   KMSKS  N + + +LL       
Sbjct: 236 LLFPHHENELAQSVCIDSNFS-IKHWMHTGLVIINNEKMSKSLNNTLLLRDLLT------ 288

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDP 349
             + + +IR  +L THYR P+ F  + L+ +  LL K   +                   
Sbjct: 289 -QYDSEIIRFFLLSTHYRHPLYFCYKNLSNSSKLLKKLYLSLRGVDFDIKGLDIVDNFKT 347

Query: 350 AVLSALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVCKEHL 401
               A+ +D NT  A+  L +L++E        S K   L         ILGI +     
Sbjct: 348 DFYKAMNSDFNTPLALSILLRLSKEINKFKLIDSNKASQLASKLRQLGSILGILLKDPEY 407

Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                   N +I   I  L+ ER    ++K +  AD IRK+L   G +LED 
Sbjct: 408 FLQNNFNCNNSIIGKINSLIYERDKARRVKDWVRADRIRKELLELGIVLEDT 459


>gi|322379889|ref|ZP_08054175.1| cysteinyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147684|gb|EFX42298.1| cysteinyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 475

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 158/497 (31%), Positives = 243/497 (48%), Gaps = 61/497 (12%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I ++++  ++   F  +    +++Y+CGPTVYD++H+G+AR  IVFD+L R+L   
Sbjct: 1   MHPPIYLFDSHHKQKRPFVPLKAPKVKIYICGPTVYDYSHLGHARSAIVFDLLTRMLTLS 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V+N TDIDDKII +A QE  +I      + ++ +    ++++   L  L PT
Sbjct: 61  GY--SVEIVKNFTDIDDKIISKALQEGVNI------TDLSRRFIASYLEEMQALGVLRPT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +P+A+ H+  +  +I+ ++  G+AY+     I  DT     YGS S   ++ + + +R+
Sbjct: 113 SEPKASEHLEAIEDMIKRLLEKGYAYQTKEGSIYLDTRLDSAYGSLSAHSLEAENV-SRI 171

Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDI 233
            +   K +P DF LWK      + G+ S +G+GRPGWHIECSAM ++ L         DI
Sbjct: 172 EDNLEKHHPQDFALWKTYKGEGDLGYLSAFGKGRPGWHIECSAMIANTLAYLDEPYQIDI 231

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGG DL FPHHENE  Q+ CA   E  A  WIHNGF+N+ G+KMSKS GN   I + L 
Sbjct: 232 HGGGSDLFFPHHENEACQTRCAFNQE-LAQFWIHNGFVNISGQKMSKSLGNSFYIKDAL- 289

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTST 342
                 + +   V+R  +L  HY   + F  + L   +  L K            P+ S 
Sbjct: 290 ------KVYDGEVLRNYLLGVHYSAILHFNEEDLNSQKKRLDKLYRLKKRALEISPEKSK 343

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNAS 388
           S      A+L A+ +DLN   A+  L +  +ES ++ D              +L      
Sbjct: 344 SNQNFQHALLQAMQDDLNISKALSILEEYLQESNQSLDNASSKTNKKKCAQEILENLTFI 403

Query: 389 AHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
             +LG+      L      +  +   I   +  R    + K F+ AD IRK L  +G  L
Sbjct: 404 DQLLGLGGKDPTLYFQLGVDTALKDKITTQILRRQKAKEAKDFALADSIRKDLAQQGISL 463

Query: 443 EDYKNPDNGQRMTRWKQ 459
            D          T W++
Sbjct: 464 MDT------PSGTIWEK 474


>gi|311106733|ref|YP_003979586.1| cysteinyl-tRNA synthetase 1 [Achromobacter xylosoxidans A8]
 gi|310761422|gb|ADP16871.1| cysteinyl-tRNA synthetase 1 [Achromobacter xylosoxidans A8]
          Length = 467

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 159/470 (33%), Positives = 224/470 (47%), Gaps = 26/470 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R +  F  I   ++ MY CGPTVYD AHIGN R  +  D+L R+L     
Sbjct: 1   MPLALYDTWSRTVRSFTPIHAGHVGMYCCGPTVYDHAHIGNLRTYVFEDILRRVLIRNGY 60

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           E  V +V NITD+     D      + E  S    ++   I  + T+ FV D   L  L 
Sbjct: 61  E--VRHVVNITDVGHLTSDADEGEDKMEKGSRRTGESAYAIAQRYTEAFVADWQALNLLE 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           PT   RAT+HI + I  I  +   G+ Y  N+ + FDTS   +YG  +R      + G R
Sbjct: 119 PTVWCRATDHIAEQIAFIGQLDRSGYVYRTNDGLYFDTSKQDDYGFLARLDRAGLQAGKR 178

Query: 179 VPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     K+N  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ +LG  FDIH 
Sbjct: 179 VALGA-KQNITDFALWKFSPEGVVRQMEWDSPWGRGFPGWHIECSAMSAKHLGIWFDIHC 237

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLET 294
           GG D I  HH NEIAQ+  A      AN WIH  FL L    KMSKS+G+F+ +  L   
Sbjct: 238 GGEDHIAVHHSNEIAQTQAAHGTR-LANFWIHGHFLTLNADSKMSKSSGDFVRLQTLR-- 294

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGII 347
                R+      R   +  HYR  + F+   L  A+  L++       WP         
Sbjct: 295 ----SRNIDPLAYRYLCMTAHYRSKLHFSWASLGAAQTALNRLRHLYSGWPDGGRIDPDF 350

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH-LNKNIS 406
                + L +DLN   A+  L +L +       L    ++   +LG+ +   + +  +I 
Sbjct: 351 AARFNAELNDDLNLPRALAVLWELVKSELPPATLKATVDSFDFVLGLGLRDWNPVASDIP 410

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +I  L+ ER    + K +  AD IRK L ++G+ +ED  +      +  
Sbjct: 411 ESIRVLLGERAQAREAKNWVKADEIRKMLNTRGWRVEDGNDGQRLTEIAT 460


>gi|29427401|sp|P59421|SYC_BUCBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 464

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 165/469 (35%), Positives = 226/469 (48%), Gaps = 44/469 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+N+  R   + +      I MYVCG T YDF HIG+ R  I FDV+ R LR      
Sbjct: 2   LKIFNSYTRLQEQLEVDKKKTINMYVCGITAYDFCHIGHGRTFIFFDVVVRYLRSLGY-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII  +      +  N++   ++++       D + L  L P  +PR
Sbjct: 60  ALKYVRNITDIDDKIIAAS------LKNNESYISLSNRMISNMKDDFSALNILPPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            T +I  +I  I  ++   HAY A N +I+F  SS  NYG+ S +          +    
Sbjct: 114 VTENISDIIKFISILLNKKHAYVACNGDIMFSVSSYLNYGALSNQFSKILNKEINISHYS 173

Query: 184 HKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KKN ADF LWK S   +  GW SPWG GRPGWHIECS+M         DIHGGG+DL+F
Sbjct: 174 TKKNIADFALWKTSKSSIFVGWNSPWGNGRPGWHIECSSMCRSAFKNKIDIHGGGVDLLF 233

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS C D        W+H G + +   KMSKS  N + + +LL         +
Sbjct: 234 PHHENELAQSVCIDSNFS-IKHWMHTGLVIINNEKMSKSLNNTLLLRDLLT-------QY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDPAVL 352
            + +IR  +L THYR P+ F  + L+ +  LL K   +                      
Sbjct: 286 DSEIIRFFLLSTHYRHPLYFCYKNLSNSSKLLKKLYLSLRGVDFDIKGLDIVDNFKTDFY 345

Query: 353 SALYNDLNTVSAIQALHKLARE--------STKNHDLLPIFNASAHILGIEVCKEHL--- 401
            A+ +D NT  A+  L +L++E        S K   L         ILGI +        
Sbjct: 346 KAMNSDFNTPLALSILLRLSKEINKFKLIDSNKASQLASKLRQLGSILGILLKDPEYFLQ 405

Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                N +I   I  L+ ER    ++K +  AD IRK+L   G +LED 
Sbjct: 406 NNFNCNNSIIGKINSLIYERDKARRVKDWVRADRIRKELLELGIVLEDT 454


>gi|331699815|ref|YP_004336054.1| cysteinyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
 gi|326954504|gb|AEA28201.1| cysteinyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
          Length = 482

 Score =  452 bits (1164), Expect = e-125,   Method: Composition-based stats.
 Identities = 158/476 (33%), Positives = 234/476 (49%), Gaps = 47/476 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++++T  R+  +F  +    + MYVCG TV    HIG+ R  + +DVL R L Y    
Sbjct: 20  SLRLHDTATREQRDFVPLRAGTVSMYVCGATVQGVPHIGHVRSSLNYDVLRRWLTYSG-- 77

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V  VRN+TDIDDKI+ +A                 + + + F      L CL  + +P
Sbjct: 78  HDVLLVRNVTDIDDKILRKAAD------AGRPWWEWAATHERAFSAAYDALGCLPASAEP 131

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT H+ QM+ LI  +I  GHAY A  ++ F   S P YGS S +K+D+   G    +  
Sbjct: 132 RATGHVTQMVDLIARLIDRGHAYAAGGDVYFAVRSFPEYGSLSGQKVDDVAQGE--GDCG 189

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG  FDIHGGGLDL+FP
Sbjct: 190 DKRDPLDFTLWKGAKPGEPSWPTPWGAGRPGWHLECSAMATAYLGPEFDIHGGGLDLVFP 249

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQS  A      A  W+HN ++ + G KMSKS GN ++I  +L+  +       
Sbjct: 250 HHENEQAQSHAAGDG--FARYWLHNAWVTMGGEKMSKSLGNTLSIPAMLQRVR------- 300

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLS 353
              +R  ++  HYR  I+++   L+E+     +             T      +  A  +
Sbjct: 301 GVELRYYLVGPHYRSSIEYSDAALSESVSAYRRIEGFLGRVTERAGTPGVAAEVPAAFAA 360

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN-- 402
           AL +DL T  A+  +H   RE     D               A   +LG++   E     
Sbjct: 361 ALDDDLGTPGALAVVHNTVREGNSALDAGDHAAAVRAAESVRAMTGVLGLDPLDEKWAGG 420

Query: 403 -------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
                    +   ++ L+Q R      + F++AD +R +L + G  +ED  +  + 
Sbjct: 421 GSDTAALGALGSLVDDLLQRRQEARAARDFAAADEVRDRLTAAGISVEDGPDGPSW 476


>gi|312131550|ref|YP_003998890.1| cysteinyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
 gi|311908096|gb|ADQ18537.1| cysteinyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
          Length = 496

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 150/504 (29%), Positives = 230/504 (45%), Gaps = 58/504 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +K+YN+L RK   F+ ++P  + MYVCGPTVY+  H+GN R  + FD+LYR L +   
Sbjct: 2   QALKLYNSLSRKKELFEPLNPGYVGMYVCGPTVYNNVHLGNIRTFLTFDILYRYLLHTGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRNITD+   + +    E     I          +  + T  F     +   L 
Sbjct: 62  K--VRYVRNITDVGHLVGDGDEGEDKIGKIAKLEKLEPMEVVQRYTNDFHDVLNQFNFLP 119

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQK 174
           P+ +P AT H+ + I  +Q++I  G AYE+N  + FD +       NYG  S R +++  
Sbjct: 120 PSIEPSATGHLIEQIEAVQDLIQKGLAYESNGSVYFDINKYNEAGNNYGKLSGRILEDLL 179

Query: 175 MGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             TR    +  K+NP DF LWK++ P     W SPWG+G PGWH+EC+ MS  YLG  FD
Sbjct: 180 NETRALDGQAEKRNPLDFALWKKAAPEHIMQWNSPWGKGFPGWHLECTCMSVKYLGNQFD 239

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE EIAQ       +     W+H+  L + G+KMSKS GN     EL+
Sbjct: 240 IHGGGMDLKFPHHECEIAQGKGLTGEDP-VRYWMHSNMLTVNGQKMSKSLGNSFLPRELI 298

Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTS 341
                   +++    +R  ML +HYR  +DF+   L  A+    +               
Sbjct: 299 TGDHPLLEQAYSPMTVRFFMLQSHYRSTLDFSNDALKAAQKGYRRMLNGMKIAKDLTYEP 358

Query: 342 TSKGIIDPA-----------VLSALYNDLNTVSAIQALHKLAREST-------------- 376
            ++  +D                AL +DLNT   +  L  L +                 
Sbjct: 359 NAEVDLDEKKIADIQKAISGFYDALNDDLNTAVGLAQLFTLLKYVNMIYMNQLASAALGE 418

Query: 377 -KNHDLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                L   F      ILG+    E +  +    ++ ++         +++   D IR  
Sbjct: 419 ETFEALKKNFILLTQEILGL---AEEVPGDGESVLKGMLSLYKEYKAAQQYDKVDEIRAY 475

Query: 435 LESKGFILEDYKNPDNGQRMTRWK 458
            ++   +++D K+  +      W+
Sbjct: 476 FKNNRMVIKDMKHKIDWA----WE 495


>gi|32266016|ref|NP_860048.1| cysteinyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|61216291|sp|Q7VIT7|SYC_HELHP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|32262065|gb|AAP77114.1| cysteinyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 488

 Score =  452 bits (1163), Expect = e-125,   Method: Composition-based stats.
 Identities = 153/509 (30%), Positives = 246/509 (48%), Gaps = 77/509 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++++ +++   F  I  + IR+YVCGPTVYD AH+G+AR  IVFD+  RL  +   E 
Sbjct: 2   ITLFDSAKKQKIPFTPIQDNQIRLYVCGPTVYDDAHLGHARSSIVFDLWRRLFLFLGFE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+N TDIDDKII+++      +  N ++  I S     ++KD   L  L    +P+
Sbjct: 61  -VVFVKNFTDIDDKIIKKS------LQNNASVQEIGSHYIHSYLKDMASLGVLRADIEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM  +IQ ++  G+AYE  N +I        NYG+ S +++++    +R+    
Sbjct: 114 ATDNLPQMCEMIQTLLHKGYAYEGENSDIYLRIHKDKNYGALS-QRLEQSHTQSRIQNAQ 172

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
            K    DF LWK      +  ++SP+G+GRPGWHIECSAM   +L         DIH GG
Sbjct: 173 DKLEHNDFALWKGYKGENDIAYDSPFGKGRPGWHIECSAMIEKHLAYQNEEYGIDIHAGG 232

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENE +Q+ CA   E  A  W+HNGF+N+ G KMSKS GN   I + L     
Sbjct: 233 SDLLFPHHENEASQTRCATGRE-IAKYWLHNGFVNINGEKMSKSLGNSFFIKDAL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------ 339
             + +   ++R  +L  HYR  ++F  + L +++  L K  +                  
Sbjct: 287 --KVYDGEILRNYLLGVHYRLALNFNEEDLLQSKKRLDKLYRLKKRVIESHIQSPQITRE 344

Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                          +      +++ AL +D N   A+  +  +   S +  D  P   A
Sbjct: 345 EIKQFTHNIKETAKEAHKTFLSSLVEALSDDYNISKALSIIEDMLSTSNEYLDKNPKDKA 404

Query: 388 SAH-----------ILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
                         +LG+         +  L++     IE  + +R      K ++ AD 
Sbjct: 405 YKQAIKANLACIEFLLGLGGKSTQSYFQLGLDEKTKQEIESKIAKRQEAKAQKNYALADK 464

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +R +L+S+G  + D        + + W++
Sbjct: 465 LRDELKSQGIEIMDT------PQGSTWEK 487


>gi|261337996|ref|ZP_05965880.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270277500|gb|EFA23354.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 550

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 157/527 (29%), Positives = 230/527 (43%), Gaps = 96/527 (18%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y+T    +++F+ I P  + +YVCG TV    HIG+ R  + FD++ R       +
Sbjct: 39  DLKLYDTASHTVSQFEPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDIIRRWFERLGYQ 98

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI++++                     ++F K    L    PT++P
Sbjct: 99  --VTFVRNVTDIDDKILDKSAAAGQQWWQR------AYLYEREFTKAYDELGVEPPTYEP 150

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRKIDE---- 172
           RAT H+  M+ LIQ II +GHAY            + FD +S P+YG  + +K  E    
Sbjct: 151 RATGHMMDMVALIQRIIDNGHAYVVRDEQGNPTGNVYFDVASWPHYGELTHQKQSEPGAQ 210

Query: 173 -------QKMGTRVPE----------------------KYHKKNPADFILWKRSTPMEP- 202
                       RV +                         K +P DF LWK     +P 
Sbjct: 211 IDAVDVELDEAARVADAMGPSVDTAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDTDPV 270

Query: 203 --GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
              W +P+G GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+C A     
Sbjct: 271 DARWHTPFGEGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTCAAGYDS- 329

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  W+H+ ++  +G KMSKS GN +++  +L          PA V+R A+    YR  +
Sbjct: 330 -AARWMHSAWVTAKGEKMSKSLGNGLSVPVVLAEH-------PAWVVRYALGGVQYRSML 381

Query: 321 DFTVQRLTEAEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTV 362
           +++ Q L EA     +                      +     +     +A+  D+N  
Sbjct: 382 EWSDQTLAEATAAYERVTNFISRAEDVLGEQIDRDQIVAVGADDLPIDFTNAMNEDINVS 441

Query: 363 SAIQALHKLARESTKNHDL----------LPIFNASAHILGIEVCKE--------HLNKN 404
            A+ A+    R      D           L    A    LG++   E          N+ 
Sbjct: 442 GALAAIFTAIRNGNALMDANADAAQVRESLLQVRAMLDTLGLDPEAEPWAQETSNAANEV 501

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +   I   ++ R    K K F++AD IR  L + G  +ED       
Sbjct: 502 LDRLIATQLEARAEARKAKDFATADAIRDALAAAGITIEDTPQGPTW 548


>gi|289679397|ref|ZP_06500287.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 299

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 145/314 (46%), Positives = 196/314 (62%), Gaps = 17/314 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++      +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIDAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP
Sbjct: 174 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE        + 
Sbjct: 234 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 285

Query: 304 APVIRLAMLMTHYR 317
             V+R  ++ +H R
Sbjct: 286 PEVVRYLLVSSHSR 299


>gi|167756028|ref|ZP_02428155.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
 gi|237734013|ref|ZP_04564494.1| cysteinyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|167704020|gb|EDS18599.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
 gi|229382839|gb|EEO32930.1| cysteinyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 449

 Score =  452 bits (1162), Expect = e-125,   Method: Composition-based stats.
 Identities = 161/470 (34%), Positives = 230/470 (48%), Gaps = 50/470 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  +KI+NTL  K  EF+ +    + +YVCGPTVY++ HIGN RPMIVFDVL R   Y 
Sbjct: 1   MEVMMKIFNTLTNKKEEFKPLREGEVSIYVCGPTVYNYVHIGNTRPMIVFDVLRRTFEYL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  VT+V N TD+DDKII+ A+ E            +T K    +      L  L PT
Sbjct: 61  GYK--VTFVSNFTDVDDKIIKAAKAE------GITEKELTDKYIAAYEDVRRNLNLLFPT 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
           + PR TN +  +I  I N++  G+AYE + ++ F  S I  YG  S  KI++   G   R
Sbjct: 113 YAPRVTNTMDAIIKFIDNLVKSGYAYEVDGDVYFRVSKIDEYGQLSGIKIEDLVAGASER 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGG 237
           + E   K+   DF LWK++      ++SPW +GRPGWH EC  M +    G   DIHGGG
Sbjct: 173 IDENDKKEESTDFALWKKTDEG-IRFDSPWSKGRPGWHTECVVMINDIFEGGKIDIHGGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENEIAQS         A+ W+HN  +N++ +KMSKS GN I   +++     
Sbjct: 232 QDLKFPHHENEIAQSMACHH-HPIAHTWMHNQMINIDNQKMSKSLGNVIWAKDMVAELG- 289

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGI 346
                   V++  ML +HYR P++ T + L   +  ++K                 +   
Sbjct: 290 ------CNVVKWFMLSSHYRNPLNLTEEVLNSVKKEVAKVDNVIKSVSLYLQVNHIANEN 343

Query: 347 IDPAVLS----ALYNDLNTVSAIQALHKLAREST-------KNHDLLPI----FNASAHI 391
            + A +     AL +DLNT  A+  +    ++         KN   + I          +
Sbjct: 344 YNKAAVDGMVGALEDDLNTSLALTKILDQVKKLNLAFRQKEKNDKAIAIEYQTLLKMTAV 403

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +G       LN     A  ++ Q  L   + K F +AD +R QL  KG I
Sbjct: 404 IGFVFEPRKLN----AAELEIYQAWLEAKQNKDFETADKLRTQLIEKGII 449


>gi|167045622|gb|ABZ10271.1| putative tRNA synthetases class I (C) catalytic domain protein
           [uncultured marine microorganism HF4000_APKG10K24]
          Length = 754

 Score =  451 bits (1161), Expect = e-125,   Method: Composition-based stats.
 Identities = 154/475 (32%), Positives = 229/475 (48%), Gaps = 28/475 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL ++I E Q I+P  +RMY CGPTVY  AHIGN R  ++ D + R L     E 
Sbjct: 24  LRIFNTLTKQIEEIQPIEPGKVRMYTCGPTVYRDAHIGNLRTYLMADWIRRALEIKGIE- 82

Query: 65  CVTYVRNITDIDDK-----IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
            V +V+NITD+             +    ++        I      +F  D  R+  L  
Sbjct: 83  -VHHVKNITDVGHMRQELVEAGGDKMILAALEEGKTTQDIAQFYADRFHADEARMNILPA 141

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
              P AT HIP+M+ +++ ++ +G+AYEA   I F+ +S  +YG  SR    +   G R 
Sbjct: 142 HVFPWATQHIPEMVAIVEKLMANGNAYEAGGNIYFNVNSFADYGKLSRNTGADLLEGVRA 201

Query: 180 PEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
                KK+P DF LWK + P  +  W SPWG G PGWHIECSAM+S Y G+ FD+H GG+
Sbjct: 202 EADPLKKDPRDFTLWKAAEPGRDLKWASPWGDGFPGWHIECSAMASKYFGESFDLHTGGV 261

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           D IFPHHE+EIAQS  A   ++    W+H   L  +G KM+KS+GN   I EL+      
Sbjct: 262 DNIFPHHEDEIAQSEAAFG-QQHVRYWVHAQHLLADGAKMAKSSGNVFLIEELI------ 314

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKWPQTSTSKGIID 348
            R +     R   L   YR  ++FT   L  AE  L             P+ S     +D
Sbjct: 315 FRGFDPLAFRYLCLTVRYRHRMNFTFNSLRAAEKALTSMRQRFWIWKGLPELSQLPSEVD 374

Query: 349 PA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
                   ++ NDL+   A+     + +        L +      I G+++     + +I
Sbjct: 375 EWRRKFWESVENDLDLPGALALTWDMFKSDLPGQAKLALLIEFDEIFGLDLDALSKSHDI 434

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
              +   V +R  L     ++ AD IR  + S+GF++ED       +  T  +++
Sbjct: 435 PAPVTAAVGQRESLRYNSDYAPADTIRTDVLSQGFLVEDTGEIARVRPKTPLERR 489


>gi|325106932|ref|YP_004268000.1| cysteinyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
 gi|324967200|gb|ADY57978.1| cysteinyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
          Length = 505

 Score =  451 bits (1161), Expect = e-124,   Method: Composition-based stats.
 Identities = 163/504 (32%), Positives = 235/504 (46%), Gaps = 57/504 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I+ YNTL  ++ EFQ ++P  +RMY CGPTVYDFAHIGN R  +  D++ R L     E 
Sbjct: 3   IQFYNTLNNRLEEFQPLEPGTVRMYSCGPTVYDFAHIGNFRSFLFADLIRRFLEVMGNE- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPIN-----------------------DAISIITS 101
            V +V NITD+     +          +                        D    +  
Sbjct: 62  -VIHVMNITDVGHMTDDHLADGGGEDKMEAAAKRLKEDKKSGKVPEGAIENPDDPYQVAE 120

Query: 102 KNTQQFVKDTTRLACL----APTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDT 156
             TQ F++D  +L        P   P AT HIP+M  +I+ +I   HAY   +  + +  
Sbjct: 121 YFTQAFLEDARKLGMKIAFEYPERIPHATKHIPEMQQMIEQLIAKDHAYVGPDGAVYYSV 180

Query: 157 SSIPNYGSFSRRKIDEQKMGT----RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            S P YGS S   +D+ + G+    +  ++ +K++PADF+LWK        W+SPWG+G 
Sbjct: 181 ESFPEYGSLSGNTLDQLREGSGGRVQEADQVNKRHPADFLLWKPDQSHVMKWDSPWGKGY 240

Query: 213 PGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           PGWHIECS M+   LG    DIH GG DLIFPHHE EIAQS  A      A  W+H  FL
Sbjct: 241 PGWHIECSVMARLLLGRDTIDIHTGGEDLIFPHHECEIAQSRGASGEGSFARFWMHARFL 300

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
            +EG KMSKS GNF T+ ++L + K  GR     V+R  +L +HYR  ++FT + L ++ 
Sbjct: 301 MVEGEKMSKSKGNFYTVRDVL-SGKVTGRDVHPAVLRYELLKSHYRSNMNFTEKGLKDSA 359

Query: 332 ILLSKWPQ--------TSTSKGIID------PAVLSALYNDLNTVSAIQALHKLARESTK 377
             + K  +        T      ID         L+AL +DLN   A+  L      +  
Sbjct: 360 GAVRKLNEFNQQLQAKTGGKVAEIDNSHPVLAEFLAALSDDLNIAGALGVLFPWMHNNND 419

Query: 378 N-HDLLPIFNASAHILGIEVCK-EHLNKNISIA-----IEKLVQERLILLKMKKFSSADY 430
              + L +      IL +   + E   ++   A     IE L +        K +  AD 
Sbjct: 420 APEEALAVLQTINRILDVAPMEHEQAEESGGAAEGGLDIEALCRGIDEARASKDWGKADE 479

Query: 431 IRKQLESKGFILEDYKNPDNGQRM 454
           +R QL+  G+ + +        + 
Sbjct: 480 LRNQLQDAGYEVRNSPEGTVATKQ 503


>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 491

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 170/512 (33%), Positives = 244/512 (47%), Gaps = 108/512 (21%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++++T  +    F+      + MYVCG T YD++H+G+AR  + FDVL+R L+Y   E
Sbjct: 21  ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YVRN TDIDDKII+RA +        +    ++S+   +F +D   L CL PTH+P
Sbjct: 81  --VNYVRNFTDIDDKIIKRANE------AGEDALSLSSRFIDEFHRDMYELQCLPPTHEP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           R T HI Q+I LI  I+ +G AY    ++ F   + P+Y S S RK+D+ + GTRV    
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NPADF LWK +   EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE+AQS  A                              I++             + 
Sbjct: 253 HHENELAQSQAAYPES------------------------EIISL-------------YH 275

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------ST 342
              +RL ++ THYR  ++ +   L  A   L    QT                     + 
Sbjct: 276 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 335

Query: 343 SKGIIDP---AVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLP 383
            + +I+      L  + +DL+T +A+  L KL ++                     D + 
Sbjct: 336 DQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQ 395

Query: 384 IFNAS-------AHILGI-------EVCKEHLNKNISIAIEKL---VQERLILLKMKKFS 426
              A          ILG+       E  K+   K   +  E+L   +++R +  K K F+
Sbjct: 396 ALVALQNEVTDKLSILGLMPMSSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFA 455

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            +D IR +L + G  L            T W+
Sbjct: 456 ESDRIRTELSALGIALM------GEPTGTLWR 481


>gi|225351179|ref|ZP_03742202.1| hypothetical protein BIFPSEUDO_02769 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158635|gb|EEG71877.1| hypothetical protein BIFPSEUDO_02769 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 557

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 160/542 (29%), Positives = 230/542 (42%), Gaps = 109/542 (20%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T    ++ F  I P  + MYVCG TV    HIG+ R  + FDV+ R       + 
Sbjct: 39  LKLYDTASHAVSNFTPIKPGQVGMYVCGATVQSSPHIGHIRAAVAFDVVRRWFERLGYK- 97

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKI+++A                     ++F +    L    PT++PR
Sbjct: 98  -VTFVRNVTDIDDKILDKAAAAGQQWW------ERAYIYEREFTEAYNTLGVEPPTYEPR 150

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK-------- 169
           AT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K        
Sbjct: 151 ATGHMIDMIDLIKQIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVADAA 210

Query: 170 ---IDEQKMGTR------------VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRG 211
               D                         K +P DF LWK     +P    W +P+G G
Sbjct: 211 SEVADAMGPSVDNTGNDKYNPVDPADMSEDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGYDS--AARWMHSAWV 328

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q LTEA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLTEAQ 381

Query: 332 ILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
               +                      S S   +    ++A+ +D+N   A  A+    R
Sbjct: 382 SAYDRVSNFIERAGAAVGGQPSREEIVSVSADELPADFVAAMNDDINVSGASAAIFTAIR 441

Query: 374 ESTKNHDLLPI-----------------FNASAHILGIEVCKEHL--------------N 402
                   L                     A    LG++   E                +
Sbjct: 442 SGNTLLSKLADRVDSDVAKDEVRAVLVNVRAMLDTLGLDPLAEPWVSEGAAGGTAGAGAD 501

Query: 403 KNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                A+++LV    +ER    K K F+ AD IR  L + G  +ED        +   W 
Sbjct: 502 SAEHTALDRLVSEQLEERAEARKAKDFARADAIRDALGAAGIAIEDT------PQGPTWT 555

Query: 459 QK 460
            K
Sbjct: 556 LK 557


>gi|227496370|ref|ZP_03926660.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
 gi|226834097|gb|EEH66480.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
          Length = 496

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 159/502 (31%), Positives = 244/502 (48%), Gaps = 68/502 (13%)

Query: 3   KKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +++Y++  R +      + P  + +Y+CG TV    HIG+ R  I FDVL R L    
Sbjct: 7   PALRLYDSAARAVVPLAPTVTPGTVAIYLCGATVQGSPHIGHMRSGIAFDVLRRWLERCG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
             + V  VRN+TDIDDKI+ ++    P +P          +  ++F      L    PT+
Sbjct: 67  --QHVLLVRNVTDIDDKILAKSAAATPPVPW----WAWAQRFEREFDAAYRALGVTPPTY 120

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQ-----KM 175
           +PRAT H+PQMI LIQ ++  GHAY      + FD  S+P+YGS + +++D+      + 
Sbjct: 121 EPRATGHVPQMIDLIQRLLDAGHAYVGEAGNVYFDVRSLPDYGSLTNQRVDDLATTEDES 180

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK++ P EP    W++PWGRGRPGWH+ECSAMS  YLG+ FD
Sbjct: 181 QLDEDVEADKRDPRDFALWKKAKPGEPADAAWDTPWGRGRPGWHLECSAMSRRYLGESFD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + + ELL
Sbjct: 241 IHGGGIDLRFPHHENEQAQSHGAGWG--FARRWVHNAWVTVKGEKMSKSLGNSLVVAELL 298

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV- 351
                  +S+   V+RLA+   HYR  ++F+ + L  A  L  +     T    +   V 
Sbjct: 299 -------KSYDPAVLRLALGTVHYRSTVEFSEETLDSAAALWERLAGAVTRAAEVSDDVD 351

Query: 352 ---------------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------F 385
                          ++A+ +DLN   A+  +H   +          +            
Sbjct: 352 APGEQLRERALPAEYVAAMDDDLNLAGAMAVVHATLKRLNTALAASAVDATEVGEAALDL 411

Query: 386 NASAHILGIEVCKEHLN----------------KNISIAIEKLVQERLILLKMKKFSSAD 429
            A   ++G++   E                     +   +  L+++R      K ++ AD
Sbjct: 412 RAELDVMGLDPLAEPWRSRVLGAGAAGGSDAAMSALDHLVTALIEDRAAARAAKDWARAD 471

Query: 430 YIRKQLESKGFILEDYKNPDNG 451
            +R QL + G ++ED  +    
Sbjct: 472 ALRDQLTAAGVVVEDGADGARW 493


>gi|212716741|ref|ZP_03324869.1| hypothetical protein BIFCAT_01678 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660445|gb|EEB21020.1| hypothetical protein BIFCAT_01678 [Bifidobacterium catenulatum DSM
           16992]
          Length = 556

 Score =  450 bits (1158), Expect = e-124,   Method: Composition-based stats.
 Identities = 155/541 (28%), Positives = 225/541 (41%), Gaps = 108/541 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+T    ++ F  I P  + MYVCG TV    HIG+ R  + FDV+ R       + 
Sbjct: 39  LKLYDTASHAVSNFTPIKPGQVGMYVCGATVQSSPHIGHIRAAVTFDVVRRWFERLGYK- 97

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRN+TDIDDKI+++A                     ++F +    L    PT++PR
Sbjct: 98  -VTFVRNVTDIDDKILDKAAAAGQQWW------ERAYIYEREFTEAYNTLGVEPPTYEPR 150

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK-------- 169
           AT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K        
Sbjct: 151 ATGHMIDMIDLIKQIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVADAA 210

Query: 170 ---IDEQKMGTRVPEK------------YHKKNPADFILWKRSTPMEP---GWESPWGRG 211
               D                         K +P DF LWK     +P    W +P+G G
Sbjct: 211 SEVADAMGPSVDNAGNDKYNPVDPADMSEDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGYDS--AARWMHSAWV 328

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
             +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L EA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLPEAQ 381

Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
               +        G                   +    ++A+ +D+N   A  A+    R
Sbjct: 382 SAYDRVSNFIERAGAAVGGQPPREEIVSISADALPADFVAAMNDDINVSGASAAIFTAIR 441

Query: 374 ESTKNHDLLPI-----------------FNASAHILGIEVCKEHLNKN------------ 404
                   L                     A    LG++   E                 
Sbjct: 442 SGNTLLSKLADRVDSDVAKDEVRAVLVNVRAMLDTLGLDPLAEPWVSEGAAGGAGSGADS 501

Query: 405 -----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
                +   + + ++ER    K K F+ AD IR  L + G  +ED        +   W  
Sbjct: 502 AEHTALDRLVSEQLEERAEARKAKDFARADAIRDALGAAGITIEDT------PQGPTWTL 555

Query: 460 K 460
           K
Sbjct: 556 K 556


>gi|171741395|ref|ZP_02917202.1| hypothetical protein BIFDEN_00478 [Bifidobacterium dentium ATCC
           27678]
 gi|283455255|ref|YP_003359819.1| cysteinyl-tRNA synthetase [Bifidobacterium dentium Bd1]
 gi|171277009|gb|EDT44670.1| hypothetical protein BIFDEN_00478 [Bifidobacterium dentium ATCC
           27678]
 gi|283101889|gb|ADB08995.1| cysS Cysteinyl-tRNA synthetase [Bifidobacterium dentium Bd1]
          Length = 547

 Score =  450 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 153/544 (28%), Positives = 231/544 (42%), Gaps = 109/544 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++K+Y+T    ++ F  + P  + +YVCG TV    HIG+ R  + FDV+ R  +    
Sbjct: 27  TELKLYDTASHTVSSFVPLRPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFQRLGY 86

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A                     ++F +    L    PT++
Sbjct: 87  K--VTFVRNVTDIDDKILDKAAAAGQQWW------ERAYIYEREFTEAYDTLGVEPPTYE 138

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRK------ 169
           PRAT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K      
Sbjct: 139 PRATGHMIDMIDLIRKIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVSD 198

Query: 170 -----IDEQKMGTRVPEK------------YHKKNPADFILWKRSTPMEP---GWESPWG 209
                 D                         K +P DF LWK     +P    W +P+G
Sbjct: 199 DASKITDAMGPSVDNAGDDKYNPIDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFG 258

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ 
Sbjct: 259 TGRPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGYDS--AARWMHSA 316

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 317 WVTAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLAE 369

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                      + S   +    ++A+ +D+N   A  A+   
Sbjct: 370 AQSAYDRVANFIERAGAAVGEQPSHDEIAAISADALPADFVAAMNDDINVSGATAAIFTA 429

Query: 372 ARESTKN-----------------HDLLPIFNASAHILGIEVCKEHL------------- 401
            R                       + L    A    LG++   E               
Sbjct: 430 IRSGNTLLSKLADRADSDAAKAEVREALVNVRAMLDTLGLDPLAEPWVNGGVAGGAAGAA 489

Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
                +  +   + + + ER    K K F+ AD IR  L + G  +ED      G + + 
Sbjct: 490 ADSAEHAALDKLVSEQLAERAEARKSKDFARADAIRNALNAAGIAIED------GPQGST 543

Query: 457 WKQK 460
           W  +
Sbjct: 544 WSLQ 547


>gi|289178054|gb|ADC85300.1| Cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           BB-12]
          Length = 559

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 162/529 (30%), Positives = 239/529 (45%), Gaps = 97/529 (18%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y+T    ++ F+ I P  + MYVCG TV    HIG+ R  + FD++ R       +
Sbjct: 43  DLKLYDTATHAVSRFEPIKPGEVGMYVCGATVQSAPHIGHIRAAVAFDIIRRWFERLGYK 102

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT++RN+TDIDDKI+++A          +          ++F      L  LAPT++P
Sbjct: 103 --VTFIRNVTDIDDKILDKAAA------AGEDWWARAYHYEREFTHAYNELGVLAPTYEP 154

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK------- 169
           RAT HI  M++LI+ II +GHAY       E   ++ FD +S P+YG  + +K       
Sbjct: 155 RATGHIIDMVHLIERIIDNGHAYVIRDEHGELTGDVYFDVASWPHYGELTHQKQTAEVDE 214

Query: 170 --IDEQKMGTRVPEK--------------YHKKNPADFILWKRSTPMEPG---WESPWGR 210
                 +MG  V                  +K++P DF LWKR    +P    W++P+G 
Sbjct: 215 AAAVADRMGPSVDASGDDKYNPADPADLSENKRDPRDFALWKRPKSTDPADARWKTPFGT 274

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A    +TAN W+H+ +
Sbjct: 275 GRPGWHIECSAMSYRYLDGMFDIHGGGLDLRFPHHENEMAQTRAA--GYRTANRWMHSAW 332

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L EA
Sbjct: 333 VTAKGEKMSKSLGNGLSVPVVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEA 385

Query: 331 EILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
           E    +                     T  S   +    ++A+ +D+N   A  A+    
Sbjct: 386 EAAYERIMNFIGHAADALGEQPSRDEITGVSADNLPVDFVAAMNDDVNVSRATAAIFTQI 445

Query: 373 REST----------------KNHDLLPIFNASAHILGIEVC-------------KEHLNK 403
           RE                       L    A    LG++                    K
Sbjct: 446 REGNTLLARLAGNADDADRTALRAALVNVRAMLDTLGLDPLASPWIDGGDEAGGDSSALK 505

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            +   ++  +  R    K K F+ AD IR  L + G  +ED        
Sbjct: 506 TLGELVDAQLAARAEARKNKDFAKADQIRDALAAAGITIEDGPTGSTWT 554


>gi|183601840|ref|ZP_02963209.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219682755|ref|YP_002469138.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|241190331|ref|YP_002967725.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|241195737|ref|YP_002969292.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|183218725|gb|EDT89367.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           HN019]
 gi|219620405|gb|ACL28562.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           AD011]
 gi|240248723|gb|ACS45663.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           Bl-04]
 gi|240250291|gb|ACS47230.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           DSM 10140]
 gi|295793318|gb|ADG32853.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
           V9]
          Length = 545

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 162/529 (30%), Positives = 239/529 (45%), Gaps = 97/529 (18%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y+T    ++ F+ I P  + MYVCG TV    HIG+ R  + FD++ R       +
Sbjct: 29  DLKLYDTATHAVSRFEPIKPGEVGMYVCGATVQSAPHIGHIRAAVAFDIIRRWFERLGYK 88

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT++RN+TDIDDKI+++A          +          ++F      L  LAPT++P
Sbjct: 89  --VTFIRNVTDIDDKILDKAAA------AGEDWWARAYHYEREFTHAYNELGVLAPTYEP 140

Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRK------- 169
           RAT HI  M++LI+ II +GHAY       E   ++ FD +S P+YG  + +K       
Sbjct: 141 RATGHIIDMVHLIERIIDNGHAYVIRDEHGELTGDVYFDVASWPHYGELTHQKQTAEVDE 200

Query: 170 --IDEQKMGTRVPEK--------------YHKKNPADFILWKRSTPMEPG---WESPWGR 210
                 +MG  V                  +K++P DF LWKR    +P    W++P+G 
Sbjct: 201 AAAVADRMGPSVDASGDDKYNPADPADLSENKRDPRDFALWKRPKSTDPADARWKTPFGT 260

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A    +TAN W+H+ +
Sbjct: 261 GRPGWHIECSAMSYRYLDGMFDIHGGGLDLRFPHHENEMAQTRAA--GYRTANRWMHSAW 318

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L EA
Sbjct: 319 VTAKGEKMSKSLGNGLSVPVVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEA 371

Query: 331 EILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
           E    +                     T  S   +    ++A+ +D+N   A  A+    
Sbjct: 372 EAAYERIMNFIGHAADALGEQPSRDEITGVSADNLPVDFVAAMNDDVNVSRATAAIFTQI 431

Query: 373 REST----------------KNHDLLPIFNASAHILGIEVC-------------KEHLNK 403
           RE                       L    A    LG++                    K
Sbjct: 432 REGNTLLARLAGNADDADRTALRAALVNVRAMLDTLGLDPLASPWIDGGDEAGGDSSALK 491

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            +   ++  +  R    K K F+ AD IR  L + G  +ED        
Sbjct: 492 TLGELVDAQLAARAEARKNKDFAKADQIRDALAAAGITIEDGPTGSTWT 540


>gi|289583246|ref|YP_003481712.1| cysteinyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289532799|gb|ADD07150.1| cysteinyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 498

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 147/506 (29%), Positives = 227/506 (44%), Gaps = 73/506 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + NTL  +   F+  DP N+ +Y CG TV D  H+G+AR  +  DV++R L Y   
Sbjct: 1   MTLHVTNTLTGEKEPFEPQDPENVLLYYCGLTVSDPPHLGHARSWVHVDVMHRWLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TDI++KI+ R         + +  + +     ++ + D   L  L     
Sbjct: 61  D--VRHVENFTDINEKIVAR----VGEDELGEGEAEVAETYIERTLADMRSLNLLRAEVY 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP++I L++ +I  G+AYE+N  + FD SS   YG  S +++DE +      E+
Sbjct: 115 PRVSEHIPEIIDLVETLIEKGYAYESNGSVYFDVSSFEEYGKLSNQELDEIESQGDPDER 174

Query: 183 YHKKNPADFILWKRSTPMEPG----------------------WESPWGRGRPGWHIECS 220
             K+NPADF LWK +  +EPG                      W+SPWG GRPGWHIECS
Sbjct: 175 SEKRNPADFALWK-ADGVEPGDIEEHRHEAAAPAEHACETALTWDSPWGEGRPGWHIECS 233

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           AMS+ +L    DIH GG DL+FPHHENE+AQS  A   ++ AN W+H     +   KMS 
Sbjct: 234 AMSTTHLDDTLDIHVGGRDLVFPHHENEVAQSEAATG-QQFANYWLHCELFQMADEKMSS 292

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S GNF+T++E ++        W   VIR  +    Y     ++ + + EA     +  + 
Sbjct: 293 SLGNFVTVDEAVD-------QWGTNVIRTFLTAGSYNSQQLYSDETIAEARERWEQLERA 345

Query: 341 ----------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
                                  T+         +A+ +D NT  A  AL  +A     +
Sbjct: 346 HERAVEAVDSPAARTKVEDDDLRTAVDEARETFTTAMNDDFNTREAQSALLSVASAINAH 405

Query: 379 HD------------LLPIFNASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKK 424
            +             +        ILG+    +           ++ ++  R        
Sbjct: 406 REDRDEYDYRGLRRAIDTLEELGAILGLSFTGDTTGSAALAGDVVDLVLDVREQERADGN 465

Query: 425 FSSADYIRKQLESKGFILEDYKNPDN 450
           +  AD +R +LES G  ++D      
Sbjct: 466 YERADDLRDELESLGVEVQDTDEGPT 491


>gi|257068447|ref|YP_003154702.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|256559265|gb|ACU85112.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 481

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 153/501 (30%), Positives = 240/501 (47%), Gaps = 68/501 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +++T  R    F  + P  + +YVCGPT     H+G+ R  + FDVL R L     
Sbjct: 1   MTLHLHDTATRTTAPFTPVQPGAVSLYVCGPTTQGDPHLGHLRTFLAFDVLVRWLERSGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN+TDIDDKI+ ++ +   +          + +  ++F     R+    PT++
Sbjct: 61  E--VAHVRNVTDIDDKILVKSAEADAAWWAW------SLRFEREFQDTLDRIGNRRPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+P+MI L++ +I  GHAY +    + FD +S P YG+ +R+ +++ +       
Sbjct: 113 PRATGHVPEMIALMERLIERGHAYADGAGSVYFDVASHPGYGALTRQSLEDMQD-AGEEM 171

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           +  K++  DF LWK + P EP    W++P+GRGRPGWH+ECSAM+  YLG+ FDIH GGL
Sbjct: 172 EPGKRDRHDFALWKAAKPTEPETASWDTPFGRGRPGWHLECSAMARKYLGESFDIHAGGL 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A  W+H+G + ++G KM KS  NF+T    L      
Sbjct: 232 DLRFPHHENEQAQSHAAGYG--FAQRWMHSGMVTVDGMKMGKSLDNFVTAARALAEH--- 286

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
               PAP +RLA++  HYR  +++    + EAE +  ++  T+                 
Sbjct: 287 ----PAPAVRLALVSGHYRATVEYNATAMREAETVWERFRATAARAAERLEGAPLAAAEA 342

Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------F 385
                 +     +A+ +DL    A+  +H   RE    + LL                  
Sbjct: 343 PLADVELPAEFTAAMDDDLAVPEALAVVH---REQAALNTLLAAPGTAPSAEVTSSLGRL 399

Query: 386 NASAHILGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            A   +LG++       ++          +   I   +  R      K ++ AD +R  L
Sbjct: 400 RAMLDVLGLDPLGAQWGQDQGVSGAEHAALDALISSQLAAREAARAEKDWARADALRDAL 459

Query: 436 ESKGFILEDYKNPDNGQRMTR 456
            + G  +ED ++       TR
Sbjct: 460 TAAGIRIEDGQDGARWTLETR 480


>gi|298710863|emb|CBJ26372.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 535

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 144/530 (27%), Positives = 237/530 (44%), Gaps = 96/530 (18%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  + ++NT  R    F+  D   ++ Y CGPTVYD AHIGN R  + +DVL R L Y 
Sbjct: 15  VESGLMLFNTEGRTKERFRPQDRRRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQ 74

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V +V N+TD+DDKII R  ++        ++  +T K  + F  D   L  +  +
Sbjct: 75  GFE--VDHVCNLTDVDDKIIARMARD------GVSLEELTGKYAKLFFDDLESLNIVPAS 126

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
             PRAT HI  ++ ++Q +I    AY+ N  + F  S    YG+ +       + G    
Sbjct: 127 RYPRATEHIDDIVEMVQGLIDKELAYKVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEG 186

Query: 180 -------PEKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
                    +  K++  DF LWK   P   E  W++  G+GRPGWHIECSAM+  +LG  
Sbjct: 187 GGVNDAAEFESEKEDAKDFALWKGYKPEDGEVFWDTLLGKGRPGWHIECSAMARKFLGDT 246

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            D+H GG+DL+FPHHENE+AQS      +     W+HN F+N++G KMSKS GNF+T+  
Sbjct: 247 LDVHAGGIDLVFPHHENEVAQSEGFTG-KPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKS 305

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------- 339
            L T      +      R  ++ + YR  + F+++ L  A+  L +  +           
Sbjct: 306 TLAT------ALDVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRRLDKLRVALEAAAAA 359

Query: 340 ---------TSTSKGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHD---- 380
                    +  S+ +++          + + +DLNT  A  +L  + +           
Sbjct: 360 GNEEERGDASEVSRELLEVVPKSLEGFDAGMNDDLNTPRAAASLFAVVKAGENALKRVRS 419

Query: 381 ---------------------------LLPIFNASAHILGI--------------EVCKE 399
                                      LL   +    + GI              +   +
Sbjct: 420 ANADGGDTAAAGGSPPQSLLPQVDAKYLLAALDRMDSVFGIFYEPAGYEAANTGGDSGGD 479

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
               ++   + +L+  RL   + K +++AD +R ++++ G+ ++D K  D
Sbjct: 480 GKEADLPGEMAELLARRLAARENKDWATADAVRDEIKALGYSVKDVKGKD 529


>gi|269957728|ref|YP_003327517.1| cysteinyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306409|gb|ACZ31959.1| cysteinyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 480

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 159/494 (32%), Positives = 240/494 (48%), Gaps = 61/494 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R +++F    P  + +YVCG TV    H+G+ RP + FDVL R L     
Sbjct: 1   MSLRLYDTATRTVSDFVPRTPGQVGIYVCGATVQSSPHVGHLRPSVAFDVLRRWLTRNGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT VRNITDIDDKI+ +A                 ++  ++F      L  L PT++
Sbjct: 61  Q--VTLVRNITDIDDKILAKAAAAGVEWW------AHAARYEREFTAAYDALGVLPPTYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+ QM+ L++ ++  GHAY      + FD  S P YG  +R+++++     +  +
Sbjct: 113 PRATQHVTQMVELMERLVERGHAYTTGEGNVWFDVRSWPAYGELTRQRLEDLAPEPQSSD 172

Query: 182 K-----YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 + K+N  DF LWK   P EP    W +PWG GRPGWH+ECSAM+  YLG  FDI
Sbjct: 173 DVAYPGHAKRNVHDFALWKAPKPGEPATAAWPTPWGPGRPGWHLECSAMAQRYLGDEFDI 232

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGGGLDL FPHHENE AQS  A      A  W+H  ++   G KMSKS GN + ++ELL+
Sbjct: 233 HGGGLDLRFPHHENEQAQSRAAGFG--FARRWLHAAWITQSGVKMSKSLGNGLLVSELLK 290

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP 349
           T        PAPV+R A++   YR  +++    L EA     +      + +   G +D 
Sbjct: 291 TT-------PAPVVRYAIVAVQYRSMLEWAPDTLAEATTTWDRLCGFVERATERVGAVDA 343

Query: 350 A----------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNAS 388
                       ++AL +DLN  +A+  +H+  R                   L      
Sbjct: 344 DEIAKAELPVGFVAALDDDLNVPAALAVVHEHLRAGNTALAASAGNDAAVRAELVAVRGM 403

Query: 389 AHILGIEVCKEHLNKNISI------AIEKLVQ----ERLILLKMKKFSSADYIRKQLESK 438
             +LG++       +  +       A++ LVQ     R      K ++++D IR +L   
Sbjct: 404 LDVLGLDPADPQWARTDAASSSTRHALDALVQAELEARAAARAAKDWAASDAIRDRLAGA 463

Query: 439 GFILEDYKNPDNGQ 452
           G +++D  +     
Sbjct: 464 GILVQDGPDGARWT 477


>gi|284165104|ref|YP_003403383.1| cysteinyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284014759|gb|ADB60710.1| cysteinyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 498

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 139/505 (27%), Positives = 230/505 (45%), Gaps = 71/505 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + NTL  +   F+  DP ++ +Y CG TV D  H+G+AR  +  DV++R L Y   
Sbjct: 1   MTLHVTNTLTGEKEPFEPRDPESVLLYYCGLTVSDPPHLGHARSWVHVDVMHRWLEYIGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TDI++KI+ R         + +    +     ++ + D   L  L     
Sbjct: 61  D--VRHVENFTDINEKIVAR----VGEDDLGEDELHVAETYIERTLADMRSLNLLRAEVY 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P++I L++ ++  G+AYE+N  + FD +S   YG  S +++DE +      E+
Sbjct: 115 PRVSEHVPEIIDLVETLVEEGYAYESNGSVYFDVTSFEEYGKLSNQELDEIESQGDPDER 174

Query: 183 YHKKNPADFILWKR---------------STPMEPG------WESPWGRGRPGWHIECSA 221
             K++PADF LWK                + P E        WESPWG GRPGWHIECSA
Sbjct: 175 SEKRHPADFALWKAGGVDESAIEEHRHEGAAPAEEACETSQTWESPWGEGRPGWHIECSA 234

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS  +L +  DIH GG DL+FPHHENE+AQS  A   +  AN W+H     ++  KMS S
Sbjct: 235 MSMTHLDETLDIHVGGRDLVFPHHENEVAQSEAATG-QAFANYWLHCELFQMDDEKMSSS 293

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+T+++ ++        W   V+R  +    Y     ++ + + EAE    +  +  
Sbjct: 294 LGNFVTVDDAVD-------QWGTNVLRTFLTAGSYNSKQLYSDETIAEAEERWDRLERAY 346

Query: 342 TSK----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN- 378
            +                            + ++A+ +D NT  A  AL  +A     + 
Sbjct: 347 EAAVEAVDSPDARTKVEDASFRDEIETARESFVAAMNDDFNTREAQSALLSVATAINAHL 406

Query: 379 -----------HDLLPIFNASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKF 425
                       D + +      +LG+    E           ++ +++ R    +   +
Sbjct: 407 EDRAEYDYRGLRDAVDVLEELGAVLGLSFAGETTGTADLAGDVVDLVLEVREREREAGNY 466

Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
             AD +R +L++ G  ++D  +   
Sbjct: 467 ERADDLRDELQALGIEVQDTDDGAT 491


>gi|215447914|ref|ZP_03434666.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289759738|ref|ZP_06519116.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|289715302|gb|EFD79314.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
          Length = 428

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 146/443 (32%), Positives = 218/443 (49%), Gaps = 42/443 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDI+DKI+ +A                 + + + F      L  L P+ 
Sbjct: 64  YD--VAFIRNVTDIEDKILAKAAA------AGRPWWEWAATHERAFTAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V  
Sbjct: 116 EPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+
Sbjct: 175 -AGKRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN +++  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTS--KGIIDPAVL 352
                +R  +   HYR  ++F+   + +A          L +      +   G   P   
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFA 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
            AL +DL+   A+  +H +  E  +  D               A   ILG +   +    
Sbjct: 345 EALDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWES 404

Query: 404 NIS-----IAIEKLVQERLILLK 421
                    A++ LVQ  L   +
Sbjct: 405 RDETSAALAAVDVLVQAELQNRE 427


>gi|261749164|ref|YP_003256849.1| cysteinyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
 gi|261497256|gb|ACX83706.1| cysteinyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
           americana) str. BPLAN]
          Length = 484

 Score =  448 bits (1152), Expect = e-123,   Method: Composition-based stats.
 Identities = 151/483 (31%), Positives = 226/483 (46%), Gaps = 47/483 (9%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  I+IYN+   K   F+ I    I +YVCGPTVY+  H+GN R  I+FD+++R  ++ 
Sbjct: 10  IRDHIQIYNSFTGKKELFKPIHKEYIGIYVCGPTVYNHLHLGNCRTFILFDLVFRYFKHL 69

Query: 61  YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V Y+RNITD+    +D      +    S         I  K T  F         
Sbjct: 70  GYK--VRYIRNITDVGHLENDSDDGEDKIHQRSRFEGIEPMEIVQKYTLSFHHILNIFNT 127

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQ 173
           L P+ +P AT HI + I +IQ +I    AYE N  + FD         YG  S  +ID+ 
Sbjct: 128 LPPSIEPTATGHIIEQIDMIQKLIQKNLAYENNGSVYFDVKKYSQLCSYGILSHNRIDQL 187

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                      K++  DF LWK++       W SPWG+G PGWHIEC+ MS+ YLG+VFD
Sbjct: 188 -FKKESNFLGEKRHFQDFSLWKKAKHSHIMNWNSPWGKGVPGWHIECTTMSTKYLGEVFD 246

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHE E+AQ+         A+ W+H   L L G+KMSKS GN+++  +L+
Sbjct: 247 IHGGGIDLKFPHHECELAQAIGVYNKNHLAHYWMHTNMLTLNGKKMSKSTGNYLSTKDLV 306

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-- 350
                    +   +IR  +L +HYR  ++F+ + L +AE    +             +  
Sbjct: 307 S-------KYHPIIIRFFILQSHYRSLLNFSQKGLIDAEKGYHRLINAIEKLEFFSKSDK 359

Query: 351 --------------VLSALYNDLNTVSAIQALHK----LARESTKNHDLLPIFNA----- 387
                            A+ +D NT   I  L +    L        D + +        
Sbjct: 360 KNISKFDVNKWIKNCYEAINDDFNTPLLISHLFQVIHILNHSINYIGDSIHLLKKYMNHF 419

Query: 388 SAHILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
              ILG++  +    E  +K + I  E L++ R+   K + +  +D IR++L   G  L 
Sbjct: 420 LFDILGLQKIEKNPFEKTSKKLKILTEILIKIRIEARKKRNWVLSDLIREELSRIGISLH 479

Query: 444 DYK 446
           D K
Sbjct: 480 DDK 482


>gi|162453596|ref|YP_001615963.1| hypothetical protein sce5320 [Sorangium cellulosum 'So ce 56']
 gi|161164178|emb|CAN95483.1| cysS2 [Sorangium cellulosum 'So ce 56']
          Length = 512

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 161/532 (30%), Positives = 230/532 (43%), Gaps = 100/532 (18%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K++NTL RK   F +  P  +R+Y CG TVY   HIG+AR    +DV  R L Y   
Sbjct: 1   MPLKVHNTLTRKKEPFVSARPKVVRIYTCGLTVYAPMHIGHARTYCFWDVFRRYLEYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  + N TDIDD+I++RA          +    +  +N   F +D  +L        
Sbjct: 61  --HVLSIINYTDIDDRIMQRA-------SEREGAVDVAERNIAAFRRDCRKLHIKDYAVY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RVP 180
            RAT+ + + + + + +I  GHAY  N E+ ++  +   YG  S RK+DEQ++G   RV 
Sbjct: 112 TRATDFVDEQVDMAKRLIEKGHAYTVNGEVFYEVGTWAPYGELSGRKVDEQEVGASGRVE 171

Query: 181 EK-YHKKNPADFILWKRSTPMEPGW---ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           E    K++PADF LWK +   +P W   E  W  GRPGWHIECSAMS+  LG  FD+HGG
Sbjct: 172 EDFARKRHPADFSLWKPTGAGQPSWRTGEEGWPTGRPGWHIECSAMSTALLGDHFDVHGG 231

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D +FPHHENEIAQS            W+H   L+L+  KMSKS GN I+I ELL    
Sbjct: 232 GIDNMFPHHENEIAQSEPLCG-RPWVRYWLHPEHLDLKDMKMSKSLGNVISIEELLSRHG 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------- 346
                      R   +  HYR  + F  + L ++    ++  + +T              
Sbjct: 291 HDEA-------RWFFVTQHYRCKLPFGWELLQQSAQGYARIKKLATVLAGKLSGATEAPL 343

Query: 347 ---------------------------------IDPAVLSALYNDLNTVSAIQALHKLAR 373
                                                 + A+ +DLNT +A+ A      
Sbjct: 344 APGAYASQRPEEERFPRMRHHYVHGQFGEHTERFIARFIEAMDDDLNTPNAVAAFFDYVS 403

Query: 374 ESTKNH--------DLLPIFNAS---AHILGIEVCKEHLNKNI----------------- 405
                          LL ++ A      + G+E+ +  L   +                 
Sbjct: 404 ALYSAGIEQCEDRPSLLAVYRAIVRHLAVFGVEIAEPALYPELVPDYALAPAEGAAGRGG 463

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
             AI++L+  R    K K F+ AD IR  L   G +LED        R  RW
Sbjct: 464 DAAIDRLIAMRQEARKAKDFAKADAIRNLLIEAGVVLEDT------PRGPRW 509


>gi|255513529|gb|EET89795.1| cysteinyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
           ARMAN-2]
          Length = 482

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 160/498 (32%), Positives = 235/498 (47%), Gaps = 63/498 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+ IYNTL R + EF+      + M+VCG T YD AH+G+AR  IVFDV+ R LR+   
Sbjct: 1   MKLHIYNTLSRSVEEFKPRLEGKVDMFVCGQTPYDDAHLGHARNYIVFDVVVRWLRHLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTH 121
           +  V Y++NITDI+DKII RA++             +     ++F++D   +      T 
Sbjct: 61  D--VRYIQNITDIEDKIINRAKER------GITAEELERYYEKRFLEDMEAIGVKKNVTQ 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
             R+ ++I  M+  IQ ++  G+AY+ +++I +D     +Y   S  K+++ K   R+  
Sbjct: 113 YLRSHDYIDTMVMQIQMLLDGGYAYQIDSDIYYDVDKFVDYTKLSGMKLEQLKEH-RIEP 171

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDI 233
           +  K+N  DF LWK S P EP W+             GRPGWHIE +AM+    G  +DI
Sbjct: 172 REGKRNVYDFALWKGSKPGEPSWKIKLRIGGNEIEFVGRPGWHIEDTAMTYAVFGPQYDI 231

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HGG  +LIFPHH NEIAQ+  A         W+H G LN+   KMSKS  NFITI E+L 
Sbjct: 232 HGGASELIFPHHSNEIAQAEAAFGKVPFVRYWMHAGVLNVNNIKMSKSLKNFITIREILG 291

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------- 340
                   + A  +RL M+ THYR+ I++T + + EA+  L     +             
Sbjct: 292 -------KYDAEALRLLMVSTHYRKEINYTERLIKEAQEKLDYMYNSMGVLYNAKEGNDA 344

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARES------------TKNHDLLP 383
                +     +D      +  D NT  A+  L     +             +    +  
Sbjct: 345 EGNDLAEKAVKLDSRFEELMNADFNTSVAVMELFGAFSDIRSYFESNRSIGHSNKETVYK 404

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK-GFIL 442
                A  LG+     +       A+E L++ R  L   KKF  AD IR++L  K G  L
Sbjct: 405 SLLKCAGALGLLESDAYKTGLEDEAME-LIKTREKLRVQKKFEDADRIRQELLEKYGLAL 463

Query: 443 EDYKNPDNGQRMTRWKQK 460
           ED       +  T W +K
Sbjct: 464 EDT------EYGTIWFKK 475


>gi|308235882|ref|ZP_07666619.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
 gi|311115022|ref|YP_003986243.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
 gi|310946516|gb|ADP39220.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
          Length = 529

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 155/529 (29%), Positives = 224/529 (42%), Gaps = 98/529 (18%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YNT     + F  + P ++ MYVCG TV    HIG+ R  I FDV+ R L      
Sbjct: 15  RLRLYNTATHNTSGFTTVTPGHVGMYVCGATVQSSPHIGHIRAAIAFDVVRRWLLRLGY- 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKII++A +                   ++F K    L  + PT +P
Sbjct: 74  -TVTFVRNVTDIDDKIIKKASEN------GQTWWQRAYIYEREFTKAYNTLGVMPPTVEP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRKIDEQKMG 176
           RAT HI  M+ LIQ +I  GHAY            + F   S  +YG+ + +  +     
Sbjct: 127 RATGHINDMVELIQRLINRGHAYAITDANGNPTGNVYFSVPSWQDYGALTHQNGNSDGSN 186

Query: 177 TRV--------------PEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIEC 219
           +                     K +  DF LWK     +     W +P+G GRPGWHIEC
Sbjct: 187 SDDKSSKADKYNPVDPADASPDKHDARDFALWKAPCDFDQKDARWNTPFGAGRPGWHIEC 246

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           SAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A      AN+W+H+ ++  +G KMS
Sbjct: 247 SAMSHRYLGDSFDIHGGGLDLRFPHHENEMAQTLAAGWKS--ANVWMHSAWVTSKGEKMS 304

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +++  +L  K        A V+R A+    YR  ++++ Q LTEA+    +   
Sbjct: 305 KSLGNGLSVPSVLAQK-------SAWVVRYALGGVQYRAMLEWSDQSLTEAQSAYDRISN 357

Query: 340 T------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
                              S     +      A+ +D+N   A+ A+    R      D 
Sbjct: 358 FLERANRVIENQPDYAEVQSVDADNLPKDFTKAMNDDINVSGALAAIFTAIRSGNALLDD 417

Query: 382 LP--------------------IFNASAHILGIEVCKEHLN------------------- 402
                                    A    LG++                          
Sbjct: 418 YAQNQNENQSNGIKSLIKTCVLQVRAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEH 477

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           K +   I   +++R I    K F+ AD IR  L + G ++ED     + 
Sbjct: 478 KVLESLIANQLEQRAIARAAKDFARADAIRDSLTAAGVVIEDCAQGSSW 526


>gi|325000166|ref|ZP_08121278.1| cysteinyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 440

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 160/462 (34%), Positives = 231/462 (50%), Gaps = 53/462 (11%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
            MYVCG TV    HIG+ R  + +DVL R L     +  VT VRN+TDIDDKI+ ++   
Sbjct: 2   SMYVCGATVQGLPHIGHVRSGLNYDVLRRWLGRSGYD--VTLVRNVTDIDDKILRKSEA- 58

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                         + + + F      L CL P+ +PRAT HI QM+ LI+ +I  GHAY
Sbjct: 59  -----AGRPWWEWAATHERAFTAAYDALGCLPPSVEPRATGHITQMVELIERLIERGHAY 113

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
            AN ++ F   ++P YG+ S +K+D+   G    E   K++P DF LWK + P EP W +
Sbjct: 114 AANGDVYFAVRTMPEYGTLSGQKVDDVHQGE--GEAGDKRDPLDFTLWKAAKPGEPSWPT 171

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWH+ECSAM++ YLG  FDIHGGGLDL+FPHHENE AQS  A   +  A  W+
Sbjct: 172 PWGHGRPGWHLECSAMATAYLGPEFDIHGGGLDLVFPHHENERAQSHAA--GDPFARFWL 229

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           HN ++ + G KMSKS GN + I  LL+  +          +R  ++  HYR  I+++   
Sbjct: 230 HNAWVTMGGEKMSKSLGNTLAIEALLQRVR-------PVELRYYLVGPHYRSAIEYSDAA 282

Query: 327 LTEAEILLSKWPQ----------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
           L EA     +                    +     +AL +DL T  A+ A+HKL RE  
Sbjct: 283 LDEAVAAYRRVESFVNRVRERHGLPEPSTELPAEFTAALDDDLGTPIALGAVHKLVREGN 342

Query: 377 KNHD---------LLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLI 418
              D               A+  +LG++            +   + +   +E +++ R  
Sbjct: 343 TALDAGDARTASQAASCVRATTGVLGLDPLAAGGAADNAGDAARQALGTLVESMLERRQA 402

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               + F++AD +R +L + G  +ED      G   + W  K
Sbjct: 403 ARARRDFATADRLRDELLAAGIAVED------GAGGSTWTLK 438


>gi|315453045|ref|YP_004073315.1| cysteinyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132097|emb|CBY82725.1| cysteinyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 474

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 155/495 (31%), Positives = 241/495 (48%), Gaps = 61/495 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IY++  ++    + +   ++++Y+CGPTVYD AH+G+AR  I FD+L R L     
Sbjct: 2   QAVYIYDSKTKQKQLLEPLVGHDVKIYICGPTVYDHAHLGHARSAIAFDLLRRTLEQSGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  V+N TDIDDKII +A QE        + S ++++  + +  D   L    P  +
Sbjct: 62  --VVEMVKNFTDIDDKIIAKAAQE------GVSTSALSARYIESYTADMQALGVQKPHLE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+AT H+  M  +IQ ++  GHAY+ +++I  DT     YGS S    +E  + +R+ + 
Sbjct: 114 PKATAHLGAMFNIIQQLLDKGHAYQIDHDIYLDTHKDQAYGSLSGHIYNEADV-SRLEDN 172

Query: 183 YHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSA-----MSSHYLGKVFDIHGG 236
             K++P DF LWK      + G+ESP+G+GRPGWH+ECS+     M+ H      DIH G
Sbjct: 173 PLKRHPQDFALWKSYKGESDVGYESPFGKGRPGWHLECSSMIFANMAYHDQAYQIDIHAG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENE  Q+ CA   E  A  W+HNGF+N+ G KMSKS GN   + + L    
Sbjct: 233 GSDLFFPHHENEACQTRCAFSQE-LAKYWMHNGFVNISGEKMSKSLGNSFYVKDAL---- 287

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------ 344
              + +   ++R  +L  HYR  + F  + L  ++  L K  +                 
Sbjct: 288 ---KIYDGEIVRNYLLGIHYRAVLHFNEEDLLASKKRLDKIYRLKKRALECATKTPPPSP 344

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAH 390
                 A L AL +DLN   A+  L +      +  D             +L   +    
Sbjct: 345 NPNFQRAFLQALQDDLNISKALSVLEEHVHVCNEILDQATKQTRASMACAILEDLDYVNT 404

Query: 391 ILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +LG+         +  ++  +   IE+ +  RL   K K F+ AD IR+ L  +G +L D
Sbjct: 405 LLGLGGKDPIAYFQLGVDATLLAHIEEQIARRLEAKKAKDFALADRIREDLAHQGILLMD 464

Query: 445 YKNPDNGQRMTRWKQ 459
                   + T W++
Sbjct: 465 T------PQQTLWER 473


>gi|256824257|ref|YP_003148217.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256687650|gb|ACV05452.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 500

 Score =  446 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 149/496 (30%), Positives = 227/496 (45%), Gaps = 60/496 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++++  R++ +F    P    +Y+CG T     HIG+ R  + FDVL R +     
Sbjct: 1   MTLRLHDSATREVRDFVPRVPGRASIYICGLTTQTSPHIGHLRFAVAFDVLRRWME-RGH 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT VRN+TDIDDKI+ ++ +         A +  + +  ++       +    P+++
Sbjct: 60  GLEVTLVRNVTDIDDKILAKSAEHSV------AWNEWSQRYERETSAALETIGVRPPSYE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           PRAT H+P MI L++ +I  GHAY A+    ++ FD  S P YG  +R+ ID+    T  
Sbjct: 114 PRATGHVPDMIELMERLIERGHAYPADDGSGDVYFDVRSWPAYGELTRQSIDDMTPATDA 173

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +  K++P DF LWK +   EP    W +PWGRGRPGWH+ECSAM+  +LG+ FDIHGG
Sbjct: 174 DPR-GKRDPRDFALWKGAKADEPHTATWPTPWGRGRPGWHLECSAMAWRWLGEEFDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHENE AQS  A       N W+HNG L   G KMSKS GN +T+ EL     
Sbjct: 233 GNDLRFPHHENEQAQSRAAGFG--FTNFWLHNGMLTTGGEKMSKSIGNTLTVQEL----- 285

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------Q 339
              + +    +R  +   HYR  +++T   L EA   + +                   +
Sbjct: 286 --TKIYRPLAVRWLLATVHYRSALEYTPTSLDEATAQVERVEGFLRRALEAAATTPDALR 343

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASA 389
              +   + PA   A+ +D+N  +A+  + +  R                          
Sbjct: 344 AEAADVALPPAFSEAMDDDVNVSAALAVVFEHVRRGNAALASGADHEGVRQTAVAVAGML 403

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQ----------ERLILLKMKKFSSADYIRKQLESKG 439
            +LG++      +         L             R    K K F++AD IR  L + G
Sbjct: 404 DVLGLDPLAPQWDGGAEGDAAALQALDGLVSERLAARAAAKKEKDFATADAIRDALAALG 463

Query: 440 FILEDYKNPDNGQRMT 455
             + D       +  T
Sbjct: 464 ITVADGPAGVTWELAT 479


>gi|157165603|ref|YP_001466909.1| cysteinyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|166200138|sp|A7ZDQ1|SYC_CAMC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|112800284|gb|EAT97628.1| cysteinyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 464

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 147/481 (30%), Positives = 235/481 (48%), Gaps = 52/481 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I++T +R+  EF  I    + +Y+CGPTVYD AH+G+A+  + FD+L R+L+    + 
Sbjct: 1   MRIFDTSKREKVEFSPIKDGEVSIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLKALGCK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+ +            ++  IT+K    +  D   L  L P  +P+
Sbjct: 60  -VKFARNYTDIDDKILNK------MAQTGQSLEEITNKYIAHYESDMGALNVLDPDFKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT  +  +I  I+ ++  G AY+ ++ I FDTS    Y S S +  +   +  RV     
Sbjct: 113 ATQCLEAIISYIKVLMDRGVAYKTSDGIYFDTSKDSGYFSISGKD-NNTDLIARVASFGE 171

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK------VFDIHGGGL 238
           K++  DF+LWK     E  +ESP+G+GRPGWH EC AM   +L          DIH GG+
Sbjct: 172 KRDEKDFVLWKF---DEKWYESPFGKGRPGWHTECVAMIREFLSDKENDKFEIDIHAGGI 228

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE +Q  CA   +  +  W+HNGF+ +   KMSKS  N   + + L      
Sbjct: 229 DLLFPHHENEASQCRCAYH-KNLSKYWMHNGFIKVNNEKMSKSLNNSFFVKDAL------ 281

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDP 349
            ++    V+R  +L +HYR   +++ + L  ++  L K           Q   +      
Sbjct: 282 -KNVHGEVLRYYLLTSHYRAHFNYSDEDLVASKKRLDKIYRLKKRVDGVQAGMANESFKS 340

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
            +L AL +DLN   A+ ++ +  + + +  D           ++        ILGI    
Sbjct: 341 ELLEALSDDLNASKALASVDEFVKTANERLDNNPKDKAYKAEVVANLELIGEILGIAITN 400

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
             E  +  ++      I+KL+ ER +  K + F+ AD IR +L      + D  N    +
Sbjct: 401 YVEYFQFGVSDEQKEHIQKLLDERAVAKKERNFARADEIRDELAKMNISIMDTPNGAVWE 460

Query: 453 R 453
           R
Sbjct: 461 R 461


>gi|154486613|ref|ZP_02028020.1| hypothetical protein BIFADO_00430 [Bifidobacterium adolescentis
           L2-32]
 gi|154084476|gb|EDN83521.1| hypothetical protein BIFADO_00430 [Bifidobacterium adolescentis
           L2-32]
          Length = 553

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 154/540 (28%), Positives = 228/540 (42%), Gaps = 109/540 (20%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R       +  V
Sbjct: 37  LYDTASHAVSSFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFERLGYK--V 94

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRN+TDIDDKI+++A                     ++F +  ++L    PT++PRAT
Sbjct: 95  TFVRNVTDIDDKILDKAAAAGQQWW------ERAYIYEREFTEAYSKLGVEPPTYEPRAT 148

Query: 127 NHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRK---------- 169
            H+  MI LI+ II +GH Y            + FD +S P+YG  + +K          
Sbjct: 149 GHMIDMIDLIKKIIDNGHGYVVRDADGNPTGNVYFDVASWPHYGELTHQKQTAVSDAASE 208

Query: 170 -IDEQKMGTRVPEK------------YHKKNPADFILWKRSTPMEP---GWESPWGRGRP 213
             D                         K +P DF LWK     +P    W +P+G GRP
Sbjct: 209 VTDAMGPSVDNAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTGRP 268

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ ++  
Sbjct: 269 GWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGYDS--AARWMHSAWVTA 326

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L EA+  
Sbjct: 327 KGEKMSKSLGNGLSVPAVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEAQSA 379

Query: 334 LSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLARES 375
             +        G                   +    ++A+ +D+N   A  A+    R  
Sbjct: 380 YDRVANFIERAGAAVGEQPSREEIMAISADALPADFVAAMNDDINVSGASAAIFTAIRSG 439

Query: 376 TKN-----------------HDLLPIFNASAHILGIEVCKEHL----------------- 401
                                + L    A    LG++   E                   
Sbjct: 440 NTLLSKLADRADSDVAKAEVREALVNVRAMLDTLGLDPLAEPWVSDGAAGGAAGAGADSA 499

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +  +   + + + ER    K K F+ AD IR  L + G  +ED      G + + W  K
Sbjct: 500 EHDALDKLVSEQLAERAEARKAKDFARADAIRDALGAAGIAIED------GPQGSTWSLK 553


>gi|269964028|ref|ZP_06178334.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831247|gb|EEZ85400.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 457

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 153/462 (33%), Positives = 233/462 (50%), Gaps = 25/462 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K++++NTL R +  F  I+   + +Y CGPTVYD+AH GN R  +  DVL R L    
Sbjct: 3   QSKLQLFNTLGRTLEPFNTIESGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLELNG 62

Query: 62  GEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V +V NITD+   + +      + E  +   N +   I       F+ D T L   
Sbjct: 63  YD--VNHVMNITDVGHLVSDADTGEDKMEKGARKQNKSAWEIAKYFEDAFLDDLTSLNIT 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+   RAT HI + I  +Q +      Y+ ++ + FD++ +P+YG  ++   +  + G 
Sbjct: 121 KPSIICRATEHIQEQIEFVQELEQKSFTYQTSDGVYFDSAKLPDYGKLAKLDREGLEAGI 180

Query: 178 RVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           RV E   KK+P DF LWK S  TP +  WESPWG G PGWHIECSAM+  YLG+VFDIH 
Sbjct: 181 RV-EMAEKKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGEVFDIHV 239

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ    +   + AN W+H  FL L   K+SKS G  + ++  +E  
Sbjct: 240 GGEDHIPVHHTNEIAQCQAKNGHVQ-ANYWLHGFFLQLNKEKISKS-GTSLRLDAFIE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIIDPA-- 350
               + +     R  +L +HYR  + FT + L  A+  L +     ++    G +D    
Sbjct: 296 ----KGYDPLTYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKVSALPEGGKVDQMYV 351

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
              +S + NDL    AI  + +L      + D          + G+E+ K    + I + 
Sbjct: 352 ERFVSLINNDLAMPQAIALMWELLGSVLNDADKKATARYFDRVFGLELDK-VEEEEIPLE 410

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           I +LV+ RL + K K++  AD IR+++   G+ + D  +   
Sbjct: 411 ILELVELRLEMKKQKEYQQADEIRQKVAEIGYRINDAGDGST 452


>gi|224282426|ref|ZP_03645748.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 540

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 158/540 (29%), Positives = 230/540 (42%), Gaps = 106/540 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +     +
Sbjct: 24  GLKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ 83

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++A                     ++F +    L  L PT++P
Sbjct: 84  --VTFVRNVTDIDDKILDKAAVAGQQWWAR------AYFYEREFTQAYDTLGVLPPTYEP 135

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRK------- 169
           RAT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K       
Sbjct: 136 RATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEAD 195

Query: 170 ---IDEQKMGTRVPE--------------KYHKKNPADFILWKRSTPMEP---GWESPWG 209
                  +MG  V                   K +P DF LWK   P +P    W +P+G
Sbjct: 196 EAAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFG 255

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ 
Sbjct: 256 VGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGYES--AARWMHSA 313

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 314 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 366

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                        S   +    +SA+ +D+N   A  A+   
Sbjct: 367 AQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTA 426

Query: 372 ARESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------ 402
            R        L                     A    LG++   E               
Sbjct: 427 IRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESR 486

Query: 403 --KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               +   I + +  R    K + F+ AD IR  L + G  +ED      G + + W  K
Sbjct: 487 EHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 540


>gi|313139572|ref|ZP_07801765.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
 gi|313132082|gb|EFR49699.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
          Length = 550

 Score =  446 bits (1147), Expect = e-123,   Method: Composition-based stats.
 Identities = 158/540 (29%), Positives = 230/540 (42%), Gaps = 106/540 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +     +
Sbjct: 34  GLKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ 93

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++A                     ++F +    L  L PT++P
Sbjct: 94  --VTFVRNVTDIDDKILDKAAVAGQQWWAR------AYFYEREFTQAYDTLGVLPPTYEP 145

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRK------- 169
           RAT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K       
Sbjct: 146 RATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEAD 205

Query: 170 ---IDEQKMGTRVPE--------------KYHKKNPADFILWKRSTPMEP---GWESPWG 209
                  +MG  V                   K +P DF LWK   P +P    W +P+G
Sbjct: 206 EAAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFG 265

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ 
Sbjct: 266 VGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGYES--AARWMHSA 323

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 324 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 376

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                        S   +    +SA+ +D+N   A  A+   
Sbjct: 377 AQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTA 436

Query: 372 ARESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------ 402
            R        L                     A    LG++   E               
Sbjct: 437 IRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESR 496

Query: 403 --KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               +   I + +  R    K + F+ AD IR  L + G  +ED      G + + W  K
Sbjct: 497 EHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 550


>gi|119025230|ref|YP_909075.1| cysteinyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
 gi|118764814|dbj|BAF38993.1| cysteinyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
          Length = 543

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 154/540 (28%), Positives = 228/540 (42%), Gaps = 109/540 (20%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y+T    ++ F  I P  + +Y CG TV    HIG+ R  + FDV+ R       +  V
Sbjct: 27  LYDTASHAVSSFTPIKPGQVGIYACGATVQSSPHIGHIRAAVAFDVVRRWFERLGYK--V 84

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+VRN+TDIDDKI+++A                     ++F +  ++L    PT++PRAT
Sbjct: 85  TFVRNVTDIDDKILDKAAAAGQQWW------ERAYIYEREFTEAYSKLGVEPPTYEPRAT 138

Query: 127 NHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRK---------- 169
            H+  MI LI+ II +GHAY            + FD +S P+YG  + +K          
Sbjct: 139 GHMIDMIDLIKKIIDNGHAYVVRDADGNPTGNVYFDVASWPHYGELTHQKQTAVSDAASE 198

Query: 170 -IDEQKMGTRVPEK------------YHKKNPADFILWKRSTPMEP---GWESPWGRGRP 213
             D                         K +P DF LWK     +P    W +P+G GRP
Sbjct: 199 VTDAMGPSVDNAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTGRP 258

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ ++  
Sbjct: 259 GWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAAGYDS--AARWMHSAWVTA 316

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q L EA+  
Sbjct: 317 KGEKMSKSLGNGLSVPAVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEAQSA 369

Query: 334 LSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLARES 375
             +        G                   +    ++A+ +D+N   A  A+    R  
Sbjct: 370 YDRVANFIERAGAAVGEQPSREEIMAISADALPADFVAAMNDDINVSGASAAIFTAIRSG 429

Query: 376 TKN-----------------HDLLPIFNASAHILGIEVCKEHL----------------- 401
                                + L    A    LG++   E                   
Sbjct: 430 NTLLSKLADRADSDVAKAEVREALVNVRAMLDTLGLDPLAEPWVSDGAAGGAAGAGADSA 489

Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            +  +   + + + ER    K K F+ AD IR  L + G  +ED      G + + W  K
Sbjct: 490 EHDALDKLVSEQLAERAEARKAKDFARADAIRDALGAAGIAIED------GPQGSTWSLK 543


>gi|261415170|ref|YP_003248853.1| cysteinyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261371626|gb|ACX74371.1| cysteinyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302326975|gb|ADL26176.1| cysteine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
           S85]
          Length = 484

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 159/497 (31%), Positives = 225/497 (45%), Gaps = 57/497 (11%)

Query: 5   IKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ YNT  RK   F        +RMY CGPTVY FAHIGN R  I  D L R L YY  +
Sbjct: 3   LQFYNTASRKKELFTLPEGVPAVRMYCCGPTVYHFAHIGNLRTYIFEDFLVRTLNYYGYK 62

Query: 64  KCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             V ++ NITD+     D      + E  +     ++  I    T  F+ D  RL    P
Sbjct: 63  --VNHIVNITDVGHLTSDGDTGDDKMEKGAAREGKSVWDIAKFYTDAFMADWHRLNIQEP 120

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T   RAT+HI + I L++ +   G  Y  ++ I FD+   P Y  F+R  ++  + G+R+
Sbjct: 121 TRWTRATDHIQEQIDLVKTLEEKGFTYRTSDGIYFDSLKFPRYADFARLDVENLRKGSRI 180

Query: 180 PEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K N  DF LWK S         W+SPWG G PGWHIECSAM+  Y G   DIH G
Sbjct: 181 DMG-EKHNATDFALWKFSPTDKKRAMEWDSPWGVGFPGWHIECSAMAMKYNGPTLDIHCG 239

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-------------KMSKSNG 283
           G D I  HH NEIAQS CA+ + + +  W+H  FL                  KMSKS+G
Sbjct: 240 GTDHIRVHHTNEIAQSECANGV-QFSRFWMHGEFLRTASEEKLEDGTTEQKFGKMSKSSG 298

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---- 339
            F+T+  L+E      R +     R   L +HYR  ++FT + LT A+       +    
Sbjct: 299 EFLTVTLLME------RGFNPLDYRYFALGSHYRNYLNFTWEALTGAKEAFKSLHKKTDP 352

Query: 340 --------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                   TS +          A+ +DLN   A+  ++ + +    + +   +      I
Sbjct: 353 LIGKATAITSEAAKAFQQEFKDAIGDDLNMPRALGIMNTMLKSDIDDGEKAALVADFDKI 412

Query: 392 LGI-------EVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
            G+       E  K+  N NI  A IE L+  R      K ++ +D IR +L +   +++
Sbjct: 413 FGLKLDQPREEYVKKGANDNIDTAKIEALIAARKEARANKNWAESDRIRDELAAMNIVIK 472

Query: 444 DYKNPDNGQRMTRWKQK 460
           D K        T W  K
Sbjct: 473 DSK------EGTTWSVK 483


>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 338

 Score =  445 bits (1145), Expect = e-123,   Method: Composition-based stats.
 Identities = 152/345 (44%), Positives = 213/345 (61%), Gaps = 16/345 (4%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +++++N++ +K   F+ +    +RMYVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 8   TPQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D  +L CL PT 
Sbjct: 68  YE--VEYVRNFTDIDDKIIKRANE------AGETVTSLSSRFINEFLLDMAQLQCLPPTC 119

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PR T+HI  +I LI  I+ +G AY    ++ F   + P Y S S RK+D    G+RV  
Sbjct: 120 EPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAV 179

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLI
Sbjct: 180 DTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLI 239

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS  A    +    W+HNGF+N + +KMSKS+ NF TI ++++        
Sbjct: 240 FPHHENELAQSRAAYPESE-VKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDL------- 291

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           +    +R  ++ THYR  ++ + + L  A   +    Q      I
Sbjct: 292 YHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQVLGLPNI 336


>gi|240146533|ref|ZP_04745134.1| cysteine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201344|gb|EEU99628.1| cysteine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291535114|emb|CBL08226.1| cysteinyl-tRNA synthetase [Roseburia intestinalis M50/1]
 gi|291539640|emb|CBL12751.1| cysteinyl-tRNA synthetase [Roseburia intestinalis XB6B4]
          Length = 471

 Score =  445 bits (1144), Expect = e-122,   Method: Composition-based stats.
 Identities = 161/479 (33%), Positives = 232/479 (48%), Gaps = 35/479 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+ K + YNTL RK+      +   I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENKFQFYNTLTRKVETVIPHEDGKIGMYTCGPTVYHFAHIGNLRSYIMEDVLEKSLRYV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLAC 116
             +  V  V NITD+     +    E   +      +  +  I    T  F  D  +L  
Sbjct: 61  GYD--VKRVMNITDVGHLSSDADTGEDKMLKGAKREHKTVMEIAKYYTDAFFSDCKKLNI 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P     ATN IP+ I++I+ ++  G+AY A   + FDTS + +Y  FS +   E  +G
Sbjct: 119 KTPDVVEPATNCIPEFIHMIEVLLEKGYAYVAGGNVYFDTSKLDDYYVFSSQSEKELLVG 178

Query: 177 TR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S  +LG+  
Sbjct: 179 VRDDVEEDVNKKNKNDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMKHLGEYV 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D IFPHH NEIAQS            W H   LN +  KMSKS G+F+T++ L
Sbjct: 239 DIHCGGVDNIFPHHTNEIAQSESYLG-HTWCKYWFHVQHLNDKSGKMSKSKGDFLTVSLL 297

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
            E      + +   V R+  L +HYR+P++F+ + L        K  +            
Sbjct: 298 QE------KGYDPIVYRMFCLQSHYRKPLEFSYEVLDNMAAAYKKLTKRIAELKDEGTVQ 351

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV---- 396
                        A+ NDLNT  AI  ++ L ++   +   L + N    +L + +    
Sbjct: 352 QDKFDAYKAKFEDAISNDLNTSMAITIIYDLLKDDMNDKTKLALINDFDKVLSLNLTTAQ 411

Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
              KE ++  +   +   ++ER    K K F+ AD IR +L +KG +L+D +      +
Sbjct: 412 ADAKEEIDAELESYVLAKIEERKEAKKAKDFAKADAIRDELLAKGIVLKDTREGVIWHK 470


>gi|168700079|ref|ZP_02732356.1| cysteinyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 519

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 163/538 (30%), Positives = 238/538 (44%), Gaps = 107/538 (19%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+TL RK   F       + MYVCGPTVY  +HIG+    ++FD + R L Y   + 
Sbjct: 3   LQVYSTLTRKKEPFHKQPGDTVTMYVCGPTVYKPSHIGHMVGPVIFDTVKRYLTYLGYK- 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA--CLAPT-- 120
            V +V NITD+DDK+I RA+++  ++P       + +K T+ +      L     +P   
Sbjct: 62  -VKWVVNITDVDDKLIGRAQEQKTTVP------ELAAKMTEDYFACLKALNIAVSSPDGI 114

Query: 121 -HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
              PRAT HI  MI +IQ++I   HAYE ++ + FD S   +YG  + R  ++ + G R+
Sbjct: 115 DVFPRATQHIGGMIQVIQDLIKKDHAYEVDDGVYFDVSKDADYGKLTNRDPEQMEAGARL 174

Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPW--GRGRPGWHIECSAMSSHYLGKVFDIH 234
                K+NP DF LWK S P EP    ++SP+  GRGRPGWHIEC+ M+   LG+  DIH
Sbjct: 175 EPNPKKRNPGDFALWK-SKPGEPAEVQFDSPFKCGRGRPGWHIECTCMAIKELGETLDIH 233

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGGLDL FPHHENE+AQS      +  A +W+HNG L L+  KM+ S GN + + + L+ 
Sbjct: 234 GGGLDLQFPHHENELAQSESWTG-KPFARVWMHNGLLKLKSGKMAGSLGNVLNVADALKA 292

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTV---------QRLTEAEILLSKWPQTST--- 342
              G        +R  +L THYR PID              L  A++    + + +    
Sbjct: 293 VGGG-------ALRFFVLNTHYRSPIDLGDWEPKPGSIPSNLESAKVAFETFVRFAERVQ 345

Query: 343 -------------------------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
                                    +           + +DLNT      L +L     +
Sbjct: 346 RVTGQPFASLPAPVLFDPNRKFVQPALAEFAQRFHDFMDDDLNTGGVTGVLFELVTSLNR 405

Query: 378 NHDL--------------------LPIFNASAHILGIEVCKEHL-----NKNISIAIEKL 412
             D                       +    A +LG+    E       N+ +   ++ L
Sbjct: 406 LADTTKLEDPATSNPQAKAEFTEGASLVKEIAQVLGLTFTAETKTLDGGNELVGGLMQLL 465

Query: 413 VQERLILL-----KMKK-------FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +  R  L        K        F   D IRK+L   G  LED          T W+
Sbjct: 466 LDLRANLRASAKEAAKDNPLRKALFDQTDLIRKRLGELGVTLEDR------PGGTTWR 517


>gi|171912658|ref|ZP_02928128.1| cysteinyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 520

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 169/482 (35%), Positives = 247/482 (51%), Gaps = 51/482 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++++TL R   E    +   +R Y CGPTVY  AHIGN R  I  DV  R++     
Sbjct: 47  NRLQLHDTLTRTAREVWPSEAGTLRFYGCGPTVYGPAHIGNFRTFIAQDVFRRVVELSG- 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
                +VRNITD+DDK I  +++          +   T   T++F  D   L  L P  +
Sbjct: 106 -TPTLHVRNITDVDDKTIRDSQK------AGQTLLEFTRYWTERFHADCAALNLLPPHVE 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
           P+AT+HI   I +I+++I HG+AY A +  + F  SS  +YG  S  +  E K+G     
Sbjct: 159 PKATDHIAHQIKMIEDLISHGNAYAAPDGSVYFRVSSYADYGKLSHLEDRELKVGAAQTA 218

Query: 178 RVPEKYHKKNPADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              ++Y K + ADF LWK       E  WESPWG+GRPGWH+ECSAM+  YLG  FD+H 
Sbjct: 219 NDSDEYTKDSLADFALWKAHKTDDGENFWESPWGKGRPGWHLECSAMALEYLGVEFDLHS 278

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL+FPHHENEIAQSCCA      A  W+H   L ++G KMSKS GN  T+ +L    
Sbjct: 279 GGIDLVFPHHENEIAQSCCATGGR-FARHWMHIAHLMVDGGKMSKSLGNLYTLADL---- 333

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------- 340
             G R +   V+R  +L  HYR+P++FT+  L  +   L K  +                
Sbjct: 334 --GHRGYSPAVVRYTLLSGHYRQPLNFTLHSLDASHQALLKLAKFEKQLRALTQASEAPS 391

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALH---------KLARESTKNHDLLPIFN 386
                +T K  I     + L NDLN   AI A+           L+ E+ K+  +   F 
Sbjct: 392 LDELKATGKADIFAEAWADLLNDLNVPGAIGAVFATLNKTKPAALSVEAAKSAWIGLHFV 451

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +A  L + V K+         ++ L  +R    + + ++++D +RKQ+E  G+I++D K
Sbjct: 452 LAALGLELPVIKDEGEVEAPEEVKALADQRWNAKQARDWTTSDDLRKQIELLGWIVKDSK 511

Query: 447 NP 448
             
Sbjct: 512 EG 513


>gi|168998632|ref|YP_001687900.1| hypothetical protein pK2044_00350 [Klebsiella pneumoniae
           NTUH-K2044]
          Length = 328

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 144/344 (41%), Positives = 199/344 (57%), Gaps = 25/344 (7%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG TVYD  H+G+AR  + FD++ R LR+   +  VT+VRNITDIDDKII+RAR   
Sbjct: 1   MYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD--VTFVRNITDIDDKIIQRARD-- 56

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 +    +T +   +   D  +L  L P  +PR T HIPQ+I +I+ ++    AY 
Sbjct: 57  ----TGEDWRSLTERMVHEMHIDFAKLGILPPDIEPRPTEHIPQIISMIERLLHRQFAYI 112

Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A N +++F T+S  +YG  S + I   + GTR+    +K++P DF+LWKR+ P EP W S
Sbjct: 113 AENGDVMFSTASAKDYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPS 172

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+ HYLG  FDIHGGG DLIFPHHENEIAQS  A+      N W+
Sbjct: 173 PWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQSTSANDG-PYVNYWL 231

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G + +   KMSKS  NF T+ ++L         + A  +R  +L  HYR+P++++ + 
Sbjct: 232 HTGMVTVNKEKMSKSLNNFFTLRDIL-------HRFDAQSVRFFLLGAHYRKPLNYSEEN 284

Query: 327 LTEAEILLSKWPQT--------STSKGIIDPAVLSALYNDLNTV 362
           +  A   L++            S            A+ +D NT 
Sbjct: 285 IHIARASLTRLYTACQFADGSRSEQHDAWRARFCEAMDDDFNTP 328


>gi|320355263|ref|YP_004196602.1| cysteine synthase [Desulfobulbus propionicus DSM 2032]
 gi|320123765|gb|ADW19311.1| cysteine synthase [Desulfobulbus propionicus DSM 2032]
          Length = 775

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 149/485 (30%), Positives = 240/485 (49%), Gaps = 50/485 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++NT+ RK   FQ I  + + +Y CGPT  +  +I + R +IV D++ R L     
Sbjct: 305 SQLRLFNTMTRKKEVFQPIRDNRVTLYACGPTAAESPNIAHCRRLIVADLINRSLLAQGY 364

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V    N TD+DD  I  A      I     +   T +   +F +    L     T  
Sbjct: 365 --AVELYMNFTDLDDNTITGA------IDAGADLREFTGRYIDEFKQAIEALNVQQATGY 416

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-E 181
           P A+ H+  MI +  ++I  G+AYE    I FD S   +YG  S   + + K+G  V  +
Sbjct: 417 PLASEHVGHMIEIAHDLIHKGYAYEKLGSIYFDISKFKHYGRLSGIDLSKIKIGQTVDLD 476

Query: 182 KYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            Y K NP DF L KRST  E      +E+ WG  RPGWHIECSAMS++YLG+  DIH   
Sbjct: 477 NYEKDNPRDFTLLKRSTLAELKKGIFYETDWGNIRPGWHIECSAMSTNYLGETIDIHTAS 536

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENEIA +      +  AN W+H+G L ++GRKM+K  GN +T+ E+L+    
Sbjct: 537 QDLLFPHHENEIAIAEALTG-KPLANYWLHSGQLLMDGRKMAKETGNVVTLREVLD---- 591

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTS 341
             R +    +R  +L  HYR+P+ F+ +RL  A   L +                 P+ +
Sbjct: 592 --RGYGGRELRFMLLGVHYRKPLLFSFKRLNAARTALRRIDEYTRKLLCLPAGLPHPELA 649

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
           +    ++     A+ +DLN   AI AL    +++            + +D+L        
Sbjct: 650 SYVSELEQRFHDAINDDLNISGAIGALFNFIKQTNPVVQARQLDRDQKNDVLEALRMVNT 709

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+   +   +  ++  I++L+++R    ++K +++AD  R++L  KG  + D      
Sbjct: 710 VLGVLRLE---HCPLTPEIDRLIRQRERARQLKDWTAADSAREELLRKGVTIVDTAAGPI 766

Query: 451 GQRMT 455
            +++T
Sbjct: 767 WEQIT 771


>gi|294791389|ref|ZP_06756546.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
 gi|294457860|gb|EFG26214.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
          Length = 589

 Score =  443 bits (1141), Expect = e-122,   Method: Composition-based stats.
 Identities = 156/589 (26%), Positives = 235/589 (39%), Gaps = 156/589 (26%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++IY+T    I +F  I P    +YVCG TV    H+G+ R  + FD++ R L     
Sbjct: 21  QKVRIYDTARHAIVDFTTITPGKATIYVCGATVQSSPHVGHLRAGVAFDLIRRWLMKLGY 80

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V +VRN+TDIDDKI++++  +  +                +F K    L  L PT++
Sbjct: 81  E--VVFVRNVTDIDDKILDKSAAQGQNWWAR------AYYYEAEFTKAYHTLGVLNPTYE 132

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRK------ 169
           PRAT HIP MI L+Q +I  GHAY         +  + FD  S   YG+ + ++      
Sbjct: 133 PRATGHIPDMINLVQRLIDRGHAYIIPNPDGSPSGNVYFDVPSWSQYGALTHQESGVSSG 192

Query: 170 -----------------------IDEQKMGTRVPE----------------------KYH 184
                                   D      R+ +                         
Sbjct: 193 QPDGETESGSLAEADSSEADSSEADSLAEAARIADAIAPSVDAPGNDKYNPTDPADQSER 252

Query: 185 KKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           K +P DF LWK S P +P    W++P+G GRPGWH+ECS MS  YLG  FDIHGGGLDL 
Sbjct: 253 KHDPRDFALWKASKPTDPPSARWQTPFGTGRPGWHLECSTMSRKYLGDDFDIHGGGLDLR 312

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQS  A      A+ W+H+ ++  +G KMSKS GN ++I+ +L         
Sbjct: 313 FPHHENEMAQSRAAGWG--FAHYWMHSAWVTEKGEKMSKSLGNGLSIDSVLT-------H 363

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
           +   ++R A++  HYR  +++  Q L EA+   ++        G                
Sbjct: 364 YSPWMVRYALVTVHYRSMLEWGDQTLEEAKSAYTRIMNFVDRAGELTGQPSRDEVSSLTA 423

Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLAREST-------------------------KNH 379
             +    ++A+  D N   A+ A++   R                               
Sbjct: 424 DNLPSDFVTAMNEDFNVSPALAAIYTSIRRGNGFINEENWQNANESHAQQTDRSSLSSLK 483

Query: 380 DLLPIFNASAHILGIEVCKEHL------------------------------NKNISIAI 409
            +L    +   + G++                                     + +   +
Sbjct: 484 KILLQVRSMLDVFGLDPLDPQWLPGGDGFPAYSPVGQKSSAAPAGSSSAVSALEALEALV 543

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +  R    K K F+ AD IR  L   G  +ED        + T WK
Sbjct: 544 SDQLDRRQEARKNKDFAQADAIRDSLNQAGITIEDS------PQGTSWK 586


>gi|118475287|ref|YP_891963.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166200140|sp|A0RP30|SYC_CAMFF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|118414513|gb|ABK82933.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 459

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 151/478 (31%), Positives = 230/478 (48%), Gaps = 51/478 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+++ ++  EF+ I      +YVCGPTVYD AH+G+A+  I FD+L R L+    +  V
Sbjct: 3   IYDSILKQKVEFKPIREYEANIYVCGPTVYDDAHLGHAKSSISFDLLRRTLKSLGYK--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +++N TDIDDKI+++            ++  IT+    ++  D   L       +P+AT
Sbjct: 61  KFIKNFTDIDDKILKK------MSQTGKSLEDITNHYISRYKADMYALNVADADIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +  +I  I  +  +G AY+ ++ I FDTS    Y S S RK +      RV  K  KK
Sbjct: 115 TSLTSIINYITTLFENGWAYKIDDGIYFDTSKDDKYLSLSGRKDENLI--ARVASKDEKK 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GK---VFDIHGGGLDLIF 242
           +  DF+LWK     E  ++SP+GRGRPGWH EC AM   +  G      DIH GG DL+F
Sbjct: 173 DEKDFVLWKF---DENWYDSPFGRGRPGWHSECVAMIKDHFCGSCEFEIDIHAGGADLLF 229

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQ  CA   +  A  W+HNGF+ +   KMSKS GN   I + LE         
Sbjct: 230 PHHENEAAQCRCAYN-KNLAKYWMHNGFVQVNNEKMSKSLGNSFFIKDALELV------- 281

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
           P   +R  ++ +HYR   ++ +  L  ++  L K  +         TS +       +L 
Sbjct: 282 PGEALRFYLMSSHYRANFNYDIDDLKSSKKRLDKIYRLKKRLIGVKTSKTDAKFKKDILD 341

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH-- 400
           A+ +DLN   A+  L ++   +    D           L+        +LGI    E   
Sbjct: 342 AMSDDLNISVALAILDEMVNNANAKLDNEPKNRDFKQILVSNLEFVKELLGILYIDEFKW 401

Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
               ++ ++   I  L+ +R +  K K F  AD IR +L +    + D  N    +++
Sbjct: 402 FQWGVDDSLKQEISVLIDQRNMAKKDKNFILADQIRDKLTNMDISIMDTPNGTMWEKV 459


>gi|206896033|ref|YP_002247201.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738650|gb|ACI17728.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 460

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 159/483 (32%), Positives = 227/483 (46%), Gaps = 50/483 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL RK  + +      I  YVCG T YD  H+G+ R  +VFD+ +R ++    + 
Sbjct: 1   MKLYDTLSRKFVDLEKKPGEKIAGYVCGITPYDEPHLGHVRTALVFDLFHRYVKAQGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              +V N TD+DDKIIER+      + ++     +     + + K    L         R
Sbjct: 60  -PVFVSNFTDVDDKIIERS------VQLSIHPFALAEIYERLYYKLMDFLNVEPLYAYIR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM-GTRVPEKY 183
            +  IP +I  I+ +I   HAY   + + F   S PNYG  S RK+++  +  +RV    
Sbjct: 113 VSQVIPDIIEAIKQLIDKKHAYVTPDGVYFSVPSFPNYGELSGRKVEDISLLESRVEPSP 172

Query: 184 HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            KK+P DF LWK   P E   W SPWG GRPGWHIEC+ +S  + G   D HGGG DLIF
Sbjct: 173 FKKDPRDFALWKSRKPNETVWWHSPWGDGRPGWHIECTVISVKFAGFPLDFHGGGSDLIF 232

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE AQS      E  A  W+H G L +   +M KS GNFI   E++         +
Sbjct: 233 PHHENEKAQSEALMGQEPFARAWMHTGMLRIGKEEMHKSLGNFIGATEIMA-------KY 285

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------QTSTSKG 345
              V+R  +L T+YR+P+ F+ +   +A   ++                    Q  +   
Sbjct: 286 DPDVLRYLLLSTYYRDPVTFSEEVYNQAANTVNNLRSYFERLDWVSRDGEARTQVVSLVA 345

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLA---RESTKNHDLLPIFNASA-----HILGIEVC 397
                  SAL +DLN+ +A+  +HKL    R    N     I           + G+ + 
Sbjct: 346 SAKETFHSALEDDLNSSAALAEVHKLIAQLRVEDLNTSEASIVKQFLTHGLRTVFGLRLT 405

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           K    K     I+ +V+ R    K KKFS AD IR  L   G +LED K        TRW
Sbjct: 406 K--NGKVDESLIQDMVELRNDFRKQKKFSEADAIRDMLLRHGIVLEDTK------EGTRW 457

Query: 458 KQK 460
            ++
Sbjct: 458 IRE 460


>gi|309803791|ref|ZP_07697877.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164200|gb|EFO66461.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 357

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 146/346 (42%), Positives = 197/346 (56%), Gaps = 23/346 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL  K  EF+      + MYVCGPTVY++ HIGNAR +I FD + R L Y   E 
Sbjct: 1   MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDK+I +AR+E      N +++ +  +  + FV DTT L     T  PR
Sbjct: 60  -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----VP 180
           AT  I  +I  I+ +I  G+AY  +N++ F       YG  S + IDE + G      V 
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172

Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E+  K++  DF LWK      E  W SPWG+GRPGWHIECS MS+ YLG   DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKF 297
           L FPHHENE+AQS      +   N W+HNGF+ +     KMSKS  NFIT+++LL     
Sbjct: 233 LQFPHHENELAQSEAKTGQK-FVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
             +     V+R  M    YR+PI++T   L +AE +L ++     +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRN 330


>gi|159484322|ref|XP_001700207.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158272523|gb|EDO98322.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 637

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 150/389 (38%), Positives = 214/389 (55%), Gaps = 50/389 (12%)

Query: 1   MKKKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           +++++  +NT+ +    F+  +   ++ MYVCG TVYD++HIG+AR  + FDVLYR L  
Sbjct: 32  LRERVTFFNTMSKSKELFRPRLSDGSVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLSA 91

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             G K VTYVRN TDIDDKII RA+Q           S +T +   +F KD   L  L P
Sbjct: 92  ACGYK-VTYVRNFTDIDDKIIARAQQ----ARSGVETSELTERFIDEFNKDMAALNVLPP 146

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             +PRAT  +PQMI  I +II +GHAY  +  ++ FD +S+P YG  S R+ ++ + G R
Sbjct: 147 ALEPRATAFVPQMISTITDIIANGHAYAVDGGDVFFDVASLPGYGRLSGRQQEDNRAGER 206

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           V     K++PADF LWK + P EP W SPWG GRPGWHIECS+M    +G V DIHGGG 
Sbjct: 207 VAVDSRKRSPADFALWKAAKPGEPAWPSPWGPGRPGWHIECSSMIRELMGPVIDIHGGGR 266

Query: 239 DLIFPHHENEIAQSCCADR---------------------------------IEKTANIW 265
           DL+FPHHENE+AQS  A                                          W
Sbjct: 267 DLVFPHHENELAQSQAACGCGQHGHEHGHEHGGQQGGASTSGGDGSQSQLHNGTDFVRYW 326

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +HNGF+N++  KMSKS GNF TI ++L         +    +R  ++ + YR P++++ +
Sbjct: 327 LHNGFVNVDSEKMSKSLGNFFTIRDVLAR-------YHPLALRWFLVSSQYRAPLNYSDK 379

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
            L +A     +    + ++  +  A+ +A
Sbjct: 380 GLEDAS---GRLYYVAQARLDVVEALRAA 405



 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 54/166 (32%), Gaps = 63/166 (37%)

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNAS-------AHILG 393
            VLSAL +DLNT +A+ AL    R            K  D L +             +LG
Sbjct: 471 EVLSALADDLNTPAAVGALSAPLRTINDLLTTKAGRKRPDRLAVLAQLHCAMCRVMQLLG 530

Query: 394 IEVC------------------------------KEHLNKNI-----------SIAIEKL 412
           +E+                                E L + +             A++  
Sbjct: 531 MELELEAGARAEAAGASVGVAAGAASGLAASAAALEQLLQELRALALVRLDMTEEAVQAA 590

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +QER      K F+ +D IR  L +KG +L D          T W+
Sbjct: 591 IQERTEARAAKDFARSDAIRVDLAAKGVLLLDT------PEGTSWR 630


>gi|295394484|ref|ZP_06804707.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972663|gb|EFG48515.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 456

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 156/466 (33%), Positives = 226/466 (48%), Gaps = 66/466 (14%)

Query: 31  CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
           CG TV    HIG+ R  +VFD L R + Y   +  VT VRN+TDIDDKI+ ++  E    
Sbjct: 2   CGATVQGAPHIGHMRSAVVFDQLRRWMTYRNFD--VTLVRNVTDIDDKILSKSVDE---- 55

Query: 91  PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN- 149
                         Q F +   R+    PT++PRAT HIP+MI LI  +I  GHAY A  
Sbjct: 56  --GRPWWAHAFLYEQVFTEAYDRIGVAPPTYEPRATGHIPEMIELIARLIEAGHAYPAQD 113

Query: 150 --NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---GW 204
              ++ FDT+S P YGS +R+     +     P +  K++P DF +WK     +P    W
Sbjct: 114 GSGDVYFDTASWPEYGSLTRQDRGSMEDAADAPVR-GKRDPRDFAVWKGRKDADPVTASW 172

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           ++PWGRGRPGWHIECSAMS+ YLG  FDIHGGG DL FPHHENE+AQS  A   +  AN+
Sbjct: 173 DTPWGRGRPGWHIECSAMSTKYLGAQFDIHGGGRDLRFPHHENEMAQSNAA--GDPFANL 230

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           W+H+G ++++G KMSKS GN I  ++L +        +   ++R  +   HYR  ++FT 
Sbjct: 231 WMHSGLVSVDGNKMSKSLGNSIFAHDLFD-------EYSPLLVRFFLTSGHYRSQLEFTR 283

Query: 325 QRLTEAEILLSKWPQTSTSK--------------------GIIDPAVLSALYNDLNTVSA 364
             + + +  +++     T                      G + P    A+ +DL+T  A
Sbjct: 284 DNVAQQQAAVTRITNFLTRARTELGDTAPAVVSFESGYEGGHVAPEFAEAMDDDLSTPRA 343

Query: 365 IQALHKLARESTKNHDL------------LPIFNASAHILGIEVCKEHLNK--------- 403
           +  +     +  K  +             L         LGI        +         
Sbjct: 344 LAVVFDYVSKGYKLLEAGGSANREELAHTLVAVETMLDTLGINPTSLQWAETASGSDSAT 403

Query: 404 -NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             + + + +L   RL   K K F++AD IR QL   G ++ED  + 
Sbjct: 404 QALDVLVSELANRRLEAKKAKDFANADAIRDQLTQAGIVIEDTADG 449


>gi|67809679|gb|AAY81974.1| cysteinyl-tRNA synthetase [Wolbachia pipientis]
          Length = 404

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 172/418 (41%), Positives = 242/418 (57%), Gaps = 36/418 (8%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNAR ++V+DVL++LL++ YG+  VTYVRNITDIDDKII  A ++      N  I  IT
Sbjct: 1   IGNARSVVVYDVLFQLLKFCYGK--VTYVRNITDIDDKIINAASEK------NSNIESIT 52

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
           +   + F  D   + C  PT++P+AT ++  +I LI++++  GHAYE++  + F+  S  
Sbjct: 53  TYYIKAFHDDMESINCKKPTYEPKATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYH 112

Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWH 216
            YG+ S +K DE   G+RV    +KK+P DF+LWK +  ++      W SPWG GRPGWH
Sbjct: 113 EYGALSGKKTDELVPGSRVEVNENKKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWH 172

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECSAMS  YLGK FDIHGGG+DL FPHHENEIAQS  A      A  W+HNGFL +   
Sbjct: 173 IECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEE 232

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS  N + + +LL++   G       VIR A+L THYR+P D+T   +++A+  L+K
Sbjct: 233 KMSKSLFNIVKVRDLLDSGIKG------EVIRYALLKTHYRKPPDWTENVISDAQETLNK 286

Query: 337 WPQTS---------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------L 381
           + + S          S   I    + AL NDLN   A+  LH++A +  K  +      L
Sbjct: 287 FYRLSRGLDTINIDESNAEISKDFIDALKNDLNIPEALAILHEMAAKINKMSNESEKLKL 346

Query: 382 LPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
              F  SA  +G+      +          IE+L+  R    + K +++AD IR QL+
Sbjct: 347 TESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLK 404


>gi|48477156|ref|YP_022862.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48429804|gb|AAT42669.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 455

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 158/471 (33%), Positives = 244/471 (51%), Gaps = 41/471 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++ Y+TL   + EF+ +  + I ++VCGPTVYD  H+G+AR  I FD + + +R      
Sbjct: 1   MRFYDTLSGSVKEFKPMHKNRINIFVCGPTVYDDFHLGHARTYIFFDTIVKFMRSIGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII+RA  E      + +   I ++   ++++  + L   +  +  R
Sbjct: 59  SVFYLQNITDIDDKIIKRAHDE------DRSPEEIANRYFNEYLRIMSELGIDSVNYYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I ++I  I+ +I  G+AYE ++ + F      +YG  S++ +D      R      
Sbjct: 113 ATLYIDEIISQIKRMIEKGYAYETSDGVYFCVRKFRDYGELSKQNLDNIIENARGILNED 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF+LWK+  P EP WESPWG+GRPGWHIE +A++  Y G  +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKMKPGEPYWESPWGKGRPGWHIEDTAITETYFGDEYDIHGGGSDLIFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HE EIAQ          A+ WIH G +N+   KMSKS  N+ITI ++L       + +  
Sbjct: 233 HEAEIAQMRSISNKRYLAHYWIHTGMINVNREKMSKSLKNYITIKDVL-------KEYKP 285

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------- 350
             +R A+L  ++   I+F++  L E+   LS+   T      ID                
Sbjct: 286 NELRFAVLNANFNTSIEFSMDSLNESREALSRIINTYRKLKKIDSESGDYMVDSDYIIKR 345

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL 401
            +  + ++ +T S I+ L     +  KN D         ++ IF+     + I   +  L
Sbjct: 346 YMDIMSDNFDTRSLIRELMDFVTDINKNMDHINKDTAGNIIRIFDYINSFMNIIPEERSL 405

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           N NI   I+ ++  R  L   K++  +DYIR +LE  G  +ED  N     
Sbjct: 406 NNNI---IDSVLNIRSKLRSEKRYDLSDYIRMELEKSGIHIEDKNNKTQWW 453


>gi|205356771|ref|ZP_03223530.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345338|gb|EDZ31982.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 462

 Score =  442 bits (1137), Expect = e-122,   Method: Composition-based stats.
 Identities = 157/489 (32%), Positives = 235/489 (48%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL--LVQGN 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MTQSGQTLEEITEFYIKSYEEDMRALNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +E+ +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR+QL SK   L D  N   
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|57237647|ref|YP_178895.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|121612326|ref|YP_001000491.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005427|ref|ZP_02271185.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|61216114|sp|Q5HUZ0|SYC_CAMJR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|166200143|sp|A1VZF0|SYC_CAMJJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|57166451|gb|AAW35230.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|87249406|gb|EAQ72366.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|315058256|gb|ADT72585.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 462

 Score =  441 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 157/489 (32%), Positives = 235/489 (48%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQG--N 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MTQSGQTLEEITEFYIKSYEEDMRALNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +E+ +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR+QL SK   L D  N   
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|257077300|ref|ZP_05571661.1| cysteinyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 456

 Score =  441 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 158/469 (33%), Positives = 237/469 (50%), Gaps = 41/469 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           I+NTL +K  +F+ + P  I M+VCGPTVYD +HIG+AR  I FDV+ + LR       V
Sbjct: 3   IHNTLGQKDEDFKPMHPGRINMFVCGPTVYDHSHIGHARTNIFFDVIAKYLRARGY--SV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++NITDIDDKII RA +E          S +     +++ +   +L   +  +  RA+
Sbjct: 61  FYLQNITDIDDKIINRAAEE------GKKYSEVADHYFEEYKEIMGKLRIDSINYYARAS 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +I ++I  I+ I+ HG+AYE  + + F+     +YG  S + +D+ +   R   K  KK
Sbjct: 115 LYIDEIIGQIKKIMEHGYAYETADGVYFNVRKFSDYGELSNQNMDQIRENARGVIKEEKK 174

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
           +P DF+LWK+  P EP WESPWG+GRPGWHIE +A++  Y G  +DIHGGG DLIFPHHE
Sbjct: 175 SPEDFVLWKKMKPGEPFWESPWGKGRPGWHIEDTAITEAYFGSEYDIHGGGNDLIFPHHE 234

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            EIAQ          A  WIH G +N+   KMSKS  NFI   ++L       +S+    
Sbjct: 235 AEIAQMRSVSGKRYLARYWIHTGMVNINKEKMSKSLKNFIQTKDIL-------KSYKPEE 287

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------QTSTSKGIIDPAVL 352
           +R AM+ ++Y   ID++ Q +  ++  + +                  +     I     
Sbjct: 288 LRFAMINSNYNTVIDYSAQLMESSKDAVERINIFYNKMKELNSTEGSYNIDAEEIINHFN 347

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK 403
           + +  + +T S I+       ++ KN +         L+ I       L I   K++   
Sbjct: 348 AVMDKNFDTRSLIREFLAFISDANKNMENISSAAASKLIHIVEYVDSFLNIIYRKQNQES 407

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           NI   I   +  R      K ++ +DYIRK+LE     +ED  N     
Sbjct: 408 NIMDII---IDIRNHARSQKDYAISDYIRKKLEENNIYIEDNGNKTIWW 453


>gi|284043153|ref|YP_003393493.1| cysteinyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283947374|gb|ADB50118.1| cysteinyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 456

 Score =  441 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 151/469 (32%), Positives = 229/469 (48%), Gaps = 34/469 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + I I++T   ++   +  +P  + +Y CGPTVY   H+GNARP +VF +  R L +   
Sbjct: 2   RTIAIHDTRSGRLLPLEPREPGKVGIYACGPTVYGRIHVGNARPFVVFSLYKRFLEHEGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+V N+TD++DKI + AR              + ++ T  +V DT  L    P H+
Sbjct: 62  D--VTFVANVTDVNDKIYDAARA------AGVESEQLAAEMTAAYVADTDALGLGRPDHE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P A   I +++ LI  +I  GHAY    ++ FD  S P YG  S R +D+   G  +   
Sbjct: 114 PLARETIDEIVALIAVLIERGHAYAVEGDVYFDVRSYPAYGELSHRDVDQMDQGEGISGA 173

Query: 183 YHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             K++P DF LWK     E   W++PWGRGRPGWHIECSAM+   LG  FD+HGGG DL+
Sbjct: 174 SLKRDPLDFALWKAWKDGEDTSWDAPWGRGRPGWHIECSAMAETLLGVGFDVHGGGSDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQ+C A      A +W+HNG + LEG KM+KS GN   ++E L         
Sbjct: 234 FPHHENEAAQTCAARGA-PLARLWMHNGMVRLEGEKMAKSVGNIFLLHEALAAHGR---- 288

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAV 351
                +       HYR+PI ++ +RL EA   + +  +                 +  A 
Sbjct: 289 ---DALVAYFCGGHYRQPIAYSDERLAEAARSVERIREAGRRLVTGSASPDDLSGLREAF 345

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLL-----PIFNASAHILGIEVC--KEHLNKN 404
            +AL +D NT  A+ A+    RE+ +  +               ++ ++           
Sbjct: 346 FAALADDFNTPRAMAAVFDWVREANRRAEAGSPVGDADLREMLQVVALDNLLDATDGADA 405

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
              A ++L+  R      + F++AD +R +L + G+ + D        R
Sbjct: 406 PDAAAQELLARREAARAARDFAAADTLRDELAALGWTVRDGAAGPELIR 454


>gi|312881510|ref|ZP_07741296.1| cysteinyl-tRNA synthetase CysS [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370787|gb|EFP98253.1| cysteinyl-tRNA synthetase CysS [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 457

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 152/459 (33%), Positives = 220/459 (47%), Gaps = 25/459 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  + +++T++R+I  F AI    + +Y CGPTVYD+AHIGN R  +  D L R+     
Sbjct: 3   QTTLNLFDTMKRQIIPFNAIKNGKVSLYACGPTVYDYAHIGNLRTYLFVDTLKRVFTL-- 60

Query: 62  GEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V +V NITD+     D      + E  +   N +   I       F  D  +L   
Sbjct: 61  NDYQVNHVMNITDVGHLVSDGDTGEDKMEKGARKQNKSAWEIARYFENIFFNDLAKLNIS 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P    RAT HI + I  IQ++   G  Y  ++ + FDT  + +YG  +R        G 
Sbjct: 121 RPNITCRATEHIQEQIEFIQSLEEQGFTYLTDDGVYFDTRKLNDYGKLARLDKLGLSPGK 180

Query: 178 RVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           R+     KK+P DF LWK S     +  W SPWG G PGWHIECSAM+  YLGK FDIH 
Sbjct: 181 RIELGD-KKSPTDFALWKLSGRRQRQMEWPSPWGIGFPGWHIECSAMAEKYLGKQFDIHI 239

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ    +   + AN W+H  FL L+  K+SKS G  +T+N L+E  
Sbjct: 240 GGEDHIPVHHTNEIAQCEAKNGHIQ-ANYWLHGYFLQLDNEKISKS-GVSLTLNTLIE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTSKGIIDP--- 349
               + +     R   L +HYR  ++FT Q L  A+    +     Q+    G IDP   
Sbjct: 296 ----KGFDPLDYRYLTLTSHYRSHLNFTWQGLAGAQKARRRLMTKLQSLPKGGKIDPSYQ 351

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
              +  +  D N   A+  +  +        D          + G+++ +E +   I + 
Sbjct: 352 SQFVGFINQDFNMPRALALVWAILDSHLNGADKRATLVYFDQVFGLDMERE-VKLIIPVE 410

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           IEKL Q+R  L +   +  AD IR +LE  G+ + D  +
Sbjct: 411 IEKLAQQRHQLKQQGNYQDADQIRAELEKLGYQINDSAD 449


>gi|86150258|ref|ZP_01068485.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597534|ref|ZP_01100768.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562430|ref|YP_002344209.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|11387149|sp|Q9PPB8|SYC_CAMJE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|85839374|gb|EAQ56636.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190126|gb|EAQ94101.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360136|emb|CAL34930.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926048|gb|ADC28400.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928267|gb|EFV07583.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929359|gb|EFV08565.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 462

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 158/489 (32%), Positives = 235/489 (48%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQG--N 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSGQTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIGIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR+QL SK   L D  N   
Sbjct: 397 MDATLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|148926966|ref|ZP_01810643.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845050|gb|EDK22147.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 462

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 158/489 (32%), Positives = 235/489 (48%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQG--N 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSGQTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR+QL SK   L D  N   
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|225377341|ref|ZP_03754562.1| hypothetical protein ROSEINA2194_02988 [Roseburia inulinivorans DSM
           16841]
 gi|225210872|gb|EEG93226.1| hypothetical protein ROSEINA2194_02988 [Roseburia inulinivorans DSM
           16841]
          Length = 473

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 162/480 (33%), Positives = 236/480 (49%), Gaps = 36/480 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL +KI      +   I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTKKIETVIPHEDGKIAMYTCGPTVYHFAHIGNLRSYIMEDVLEKSLRYV 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLAC 116
             +  V  V NITD+     +    E   +      +  +  I    T  F +D  +L  
Sbjct: 61  GYD--VKRVMNITDVGHLASDADTGEDKMLKGAKREHKTVMEIAKFYTDAFFEDCKKLNI 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
             P     ATN IP+ I +I+ ++  G+AY+A   + FDTS + NY  FS +   E  +G
Sbjct: 119 KTPDVVEPATNCIPEFIKMIEGLLEKGYAYQAGGNVYFDTSKLDNYYVFSTQAELETLVG 178

Query: 177 TR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +   +LG+  
Sbjct: 179 VRDDVDEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCIGIKHLGEYM 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+D IFPHH NEIAQS       K  N W H   LN +  KMSKS G+F+T++ L
Sbjct: 239 DIHCGGVDNIFPHHTNEIAQSESYLG-HKWCNYWFHVQHLNDKSGKMSKSKGDFLTVSLL 297

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIID 348
            E      + +   V R+  L +HYR+P++F+ + +   +   +K  +       +G  D
Sbjct: 298 QE------KGYDPIVYRMFCLQSHYRKPLEFSYEIMDNTKAAYNKLVKRVAGLKKEGETD 351

Query: 349 P--------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-- 398
                      + A+ NDLNT  AI  L+ L +  T +     +      +L + +    
Sbjct: 352 QNVFAEYKAKFVDAISNDLNTSMAITVLYDLLKADTNDITKYELIKDFDKVLSLNLENAK 411

Query: 399 -----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
                E ++  +   +   ++ER    K K F+ AD IR +L +KG +++D +      +
Sbjct: 412 STETTEGVDAELESFVLAKIEERKEAKKAKDFAKADAIRDELLAKGIVIKDTREGVVWHK 471


>gi|257459527|ref|ZP_05624636.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442952|gb|EEV18086.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 476

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 153/491 (31%), Positives = 233/491 (47%), Gaps = 62/491 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY++L +K   F+ I    +R+Y CGPTVYD AH+G+A+  + FD+L R+L+    E 
Sbjct: 1   MVIYDSLSKKKLPFKPISDGLVRIYACGPTVYDDAHLGHAKSAVSFDLLRRVLQAEGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++            ++  IT   T+++++D + L     +  P+
Sbjct: 60  -VKFARNFTDIDDKILKK------MEQSGKSLEEITEFYTRRYLQDMSALNVADASISPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I  +  LI +++  G AYE   + I FDT    +Y S S +K    K   RV    
Sbjct: 113 ATENIAAICELISSLLQKGFAYEIAGDGIYFDTRKDGDYLSLSGKKEGAGKNIARVASND 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKV---FDIHGGGL 238
            K +  DF+LWK     E  ++SP+G+GRPGWH EC AM   +L  G      DIH GG 
Sbjct: 173 AKHDEKDFVLWKF---DENWFDSPFGKGRPGWHSECVAMILAHLDSGDPQFCIDIHAGGA 229

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE AQ  CA      +  W+HNGF+ +   KMSKS GN   + + L+     
Sbjct: 230 DLLFPHHENEAAQCRCARH-RALSKYWLHNGFVQVNNEKMSKSLGNSFFVGDALKIA--- 285

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------- 339
               P   +R  +L +HYR   +++V  L  ++  L K  +                   
Sbjct: 286 ----PGEALRFYLLSSHYRANFNYSVTDLLASKKRLDKIYRLKKRVRDILTPVAGQNSAP 341

Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-AHI------ 391
               ++      ++  L +DLNT  A+  L      + +  D  P   A  A I      
Sbjct: 342 KLPAAEVKFRSEMMEFLSDDLNTSGALAVLDSFVASANEALDRAPKDKALKARIAANLEF 401

Query: 392 ----LGIEVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
               LGI    E       +++     IE+L+++R      K F+SAD IR +L      
Sbjct: 402 AKQTLGILYEDETEYFRFGVSEQQRAQIEELIKQRAQAKAEKDFASADAIRARLTDMKIE 461

Query: 442 LEDYKNPDNGQ 452
           + D  +    +
Sbjct: 462 VMDTTSGTVWE 472


>gi|257388228|ref|YP_003178001.1| cysteinyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257170535|gb|ACV48294.1| cysteinyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 494

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 142/506 (28%), Positives = 227/506 (44%), Gaps = 74/506 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL  +   F+  DP ++ +Y CG T  D AH+G+AR  +  DV++R L +   
Sbjct: 1   MTLRVTNTLTGEREAFEPRDPDSVLLYYCGLTTSDPAHLGHARGWVHVDVMHRWLAHLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+++KI+ R  +        ++ + +     Q  + D   L        
Sbjct: 61  D--VRHVENFTDVNEKIVARVGEN------GESEADVARHYVQSVIDDMRALNLRRAEVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P+++ +++ +I  G+AYEAN  + FD ++   YG  S +++DE +      E+
Sbjct: 113 PRVSEHVPEIVAMVETLIEKGYAYEANGSVYFDVTTFEEYGKLSNQQLDEIEAQGDPDEQ 172

Query: 183 YHKKNPADFILWKR---------------STPMEPG------WESPWGRGRPGWHIECSA 221
             K+NPADF LWK                ++P E        W+SPW  GRPGWHIECSA
Sbjct: 173 SEKRNPADFALWKAGGVDPAAIEDHQHEGASPPEAACETAQTWDSPWSEGRPGWHIECSA 232

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS+ +LG+  DIH GG DL+FPHHENEIAQS  A   ++ A  W+H   L  +G KMS S
Sbjct: 233 MSTTHLGETIDIHVGGQDLVFPHHENEIAQSEAATG-QQFARHWLHVRLLETKGEKMSSS 291

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-- 339
            GNF  +   ++        +   V+R  +L T Y     ++   + EA        +  
Sbjct: 292 LGNFFAVEAAVD-------EYGTDVVRTFLLSTAYHNSAVYSEATIDEAIERWETLERGY 344

Query: 340 --------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                                 T+         +A+ +D NT  A+ AL +L      + 
Sbjct: 345 ERAVRACDDVDAYATVEDDTLRTAVTTAREHFETAMNDDFNTREALAALTELVGAVNVHV 404

Query: 380 DLLPIFNASA-------------HILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKK 424
           D    F+  A              +LG+                +E L+  R        
Sbjct: 405 DEQSSFDYRALREAVETIEELGGGVLGLSFGGSEGGDVSVAEDLVELLLDVREAERAAGN 464

Query: 425 FSSADYIRKQLESKGFILEDYKNPDN 450
           +  AD +R ++ES G  ++D  +   
Sbjct: 465 YERADELRDEVESLGVEVQDTDDGPT 490


>gi|186471445|ref|YP_001862763.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184197754|gb|ACC75717.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 465

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 154/463 (33%), Positives = 219/463 (47%), Gaps = 26/463 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R +  F +I+     MY CGPTVYD AHIGN R  +  DVL R L     
Sbjct: 2   PPLMLYDTWSRALRPFVSIEAGRAGMYCCGPTVYDHAHIGNLRTYVFEDVLRRALVRNGY 61

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  + +V NITD+     D      + E  S    ++   I S+ T  FV D   L  L 
Sbjct: 62  Q--LRHVVNITDVGHLVSDADEGEDKMEKGSRRTGESAWTIASRYTDAFVSDWRALNLLE 119

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P+   RAT+HI + I  I  +   G+ Y  ++ + FDT    +YG  +R      + G R
Sbjct: 120 PSIWCRATDHIAEQIAFIVELERGGYVYRTDDGLYFDTGKQHSYGYLARLDRAGLQAGKR 179

Query: 179 VPEKYHKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     KKN  DF LWK S      +  W+SPWGRG PGWHIECSAMS+ YLG  FDIH 
Sbjct: 180 VALGA-KKNITDFALWKFSPVDVKRQMEWDSPWGRGFPGWHIECSAMSAKYLGTSFDIHC 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ+  A      AN W+H  FL L   KMSKSNG+FI +  L +  
Sbjct: 239 GGEDHIAVHHSNEIAQTEAAYGTR-LANFWLHGRFLTLSAAKMSKSNGDFIRLQTLRD-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGII 347
               R       R   L  HYR  + FT + L  A+  L++            + +    
Sbjct: 296 ----RHIDPIAYRYLCLTAHYRSNLHFTWESLYAAQAALNRLRHAYARWRQKNALADARF 351

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH-LNKNIS 406
                + +  DLN  +A+  L  L +    +       ++   +LG+ +     L   I 
Sbjct: 352 VARFDAEVNEDLNMPNALAVLWDLVKSDLPDATRRASVDSFDAVLGLGLRDWTPLATEIP 411

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             I+ L+ ER  +     ++ +D +R  L+ +G+ +ED ++  
Sbjct: 412 EDIQALLDERARVRLEGDWAKSDALRTTLQLRGWQVEDGRDGQ 454


>gi|310286868|ref|YP_003938126.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum S17]
 gi|309250804|gb|ADO52552.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum S17]
          Length = 540

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 158/540 (29%), Positives = 230/540 (42%), Gaps = 106/540 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +     +
Sbjct: 24  GLKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ 83

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++A                     ++F +    L  L PT++P
Sbjct: 84  --VTFVRNVTDIDDKILDKAAAAGQQWWAR------AYFYEREFTQAYDTLGVLPPTYEP 135

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRK------- 169
           RAT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K       
Sbjct: 136 RATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEAD 195

Query: 170 ---IDEQKMGTRVPE--------------KYHKKNPADFILWKRSTPMEP---GWESPWG 209
                  +MG  V                   K +P DF LWK   P +P    W +P+G
Sbjct: 196 EAAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFG 255

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+  A      A  W+H+ 
Sbjct: 256 VGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGYES--AARWMHSA 313

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 314 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 366

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                        S   +    +SA+ +D+N   A  A+   
Sbjct: 367 AQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTA 426

Query: 372 ARESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------ 402
            R        L                     A    LG++   E               
Sbjct: 427 IRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESR 486

Query: 403 --KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               +   I + +  R    K + F+ AD IR  L + G  +ED      G + + W  K
Sbjct: 487 EHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 540


>gi|225631085|ref|ZP_03787816.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591218|gb|EEH12369.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 350

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 167/363 (46%), Positives = 227/363 (62%), Gaps = 27/363 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F   D  +++MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFTPTDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFRLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  IT+   + F  D   + C  PTH+P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKEPTHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           KK+P DF+LWK +  ++      W SPWG GRPGWHIECSAMS  YLGK FDIHGGG+DL
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDL 233

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQS  A      A  WIHNGFL +   KMSKS  N + + +LL++   G  
Sbjct: 234 QFPHHENEIAQSKSAFAGSMFAKYWIHNGFLTVNEEKMSKSLFNIVKVRDLLDSGIKG-- 291

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAV 351
                VIR A+L THYR+P+D+T   +++A+  L+K+ +            S   I    
Sbjct: 292 ----EVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLLRGLDITNIDESNAEISKDF 347

Query: 352 LSA 354
           + A
Sbjct: 348 IDA 350


>gi|226226241|ref|YP_002760347.1| cysteinyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089432|dbj|BAH37877.1| cysteinyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 473

 Score =  440 bits (1131), Expect = e-121,   Method: Composition-based stats.
 Identities = 159/493 (32%), Positives = 246/493 (49%), Gaps = 58/493 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            + ++YNTL R++  F  +D   +RMY CGPTVY+ AH+GN R  +  D+L R++R    
Sbjct: 2   PEFRLYNTLTRRVEPFAPVDGQTVRMYTCGPTVYNPAHLGNFRTFLFEDLLRRVIRLAGW 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V N+TD+DDKII +A            I  +T   T  F +D   L        
Sbjct: 62  Q--VEQVMNLTDVDDKIIRKAAA------TGQDILQVTEPFTALFHQDRRYLRIEDAERY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
           P+AT H+P+MI L++ ++ +G AY A +  + F      +YG  S+    E K G RV  
Sbjct: 114 PKATEHVPEMIELVERLVANGVAYTAEDGSVYFAIDRFADYGKLSQLDKRELKSGARVAQ 173

Query: 181 EKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++Y K+N  DF LWK + P +      W+SPWGRGRPGWH+ECSAM+  YLG+ FD+H G
Sbjct: 174 DEYAKENAQDFALWKSAKPEDEATGAAWDSPWGRGRPGWHLECSAMAMKYLGETFDLHAG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DLIFPHHE+EIAQS  A   ++ A  W H  FL  +G KM+K  GN   + EL E   
Sbjct: 234 GIDLIFPHHEDEIAQSEAATG-KQFARCWCHGEFLLTDGAKMAKRIGNVANVVELRE--- 289

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------- 346
              +     V R  +   HYR+ ++ T   L ++   +++    +   G           
Sbjct: 290 ---QGISGTVYRHFVFNAHYRKQLNLTEDSLEQSRAAVNRIGAFARRLGEATHGTPALVV 346

Query: 347 ----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PIFN 386
                +    +AL+ DLN   A+ AL     ++ +  D+                   F 
Sbjct: 347 VAERAEQEFYAALFEDLNAPEALAALFTFISDANRELDIAVAEPAVGDTAALERARTAFR 406

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               +L + V ++  +  ++  +E+ +  R    + + F++AD IR +L  +  ++ED  
Sbjct: 407 LMDSVLDL-VPEQLTDGELADWVEERLAARRAARERRDFAAADAIRVELTERNILIED-- 463

Query: 447 NPDNGQRMTRWKQ 459
               G   TRW++
Sbjct: 464 ----GPAGTRWRR 472


>gi|187919716|ref|YP_001888747.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187718154|gb|ACD19377.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 462

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 151/463 (32%), Positives = 210/463 (45%), Gaps = 26/463 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + EF  I P ++ +Y CGPTVYD AHIGN R  +  DVL R L     
Sbjct: 1   MPLRLYDTWTRTVREFTPIHPDHVGLYCCGPTVYDHAHIGNLRTYVFEDVLRRALVLNGY 60

Query: 63  EKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
              V +V NITD+     D      + E  S    ++   I  + T  F+ D   L  L 
Sbjct: 61  N--VRHVVNITDVGHLVSDADEGEDKMEKGSRRTGESAWAIAERYTAAFMNDWRALNLLE 118

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P    RAT+HI + I  I  +  +G  Y   + + FDTS   +YG  +R  +   + G R
Sbjct: 119 PALWCRATDHIAEQIDFIAELERNGFTYRTADGVYFDTSRQDDYGYLARLDVAGLQAGKR 178

Query: 179 VPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     K+   DF LWK S P    +  W+SPWGRG PGWHIECSAMS+ YL   FDIH 
Sbjct: 179 VAPG-EKQRATDFALWKFSPPGATRQMEWDSPWGRGFPGWHIECSAMSAKYLSPWFDIHC 237

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ+         AN W+H  FL L+  KMSKS G+F+ +  L E  
Sbjct: 238 GGEDHIPVHHSNEIAQTQARYGTR-LANFWMHGHFLLLDAGKMSKSGGDFLRLQTLSE-- 294

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTSTSKGIID 348
               R       R   L  HYR  + F+   L  A           ++WPQ         
Sbjct: 295 ----RGNDPLAYRYLCLSAHYRSSLRFSEAALDAAQAALDRLRRSYARWPQGGKPDAASV 350

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK--NIS 406
               + + +DLN   A+  L  + R            +    +LG+ +          + 
Sbjct: 351 ARFKAEVDHDLNLPRALAVLWDVVRSDLPPATRRASVDCFDVVLGLGLADWKDVDTPELP 410

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
             I  L  +R      K++S AD +R  + + G+++ED     
Sbjct: 411 AEIAALADQRERARAAKQWSEADRLRDVMTAAGWLVEDSAGGQ 453


>gi|153831904|ref|ZP_01984571.1| cysteinyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148871902|gb|EDL70725.1| cysteinyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 457

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 155/462 (33%), Positives = 235/462 (50%), Gaps = 25/462 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K++++NTL R +  F  I+   + +Y CGPTVYD+AH GN R  +  DVL R L    
Sbjct: 3   QPKLQLFNTLGRALEPFNTIESGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLELNG 62

Query: 62  GEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V +V NITD+   + +      + E  +   N +   I       F+ D  RL  +
Sbjct: 63  YD--VNHVMNITDVGHLVSDADTGEDKMEKGARKQNKSAWEIAKYFEDVFLDDLNRLNII 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+   RA  HI + I  +Q +   G  Y+ ++ + FD++ +P+YG  ++   +  + G 
Sbjct: 121 KPSIICRAAEHIQEQIEFVQELEQKGFTYQTSDGVYFDSAKLPDYGKLAKLDREGLEAGI 180

Query: 178 RVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           RV E   KK+P DF LWK S  TP +  WESPWG G PGWHIECSAM+  YLG+VFDIH 
Sbjct: 181 RV-EMAEKKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGEVFDIHV 239

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ    +   + AN W+H  FL L   K+SKS G  + ++ L+E  
Sbjct: 240 GGEDHIPVHHTNEIAQCQAKNGHVQ-ANYWLHGFFLQLNKEKISKS-GTSLRLDALIE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIIDPAVL 352
               + +     R  +L +HYR  + FT + L  A+  L +     ++    G +D   +
Sbjct: 296 ----KGYDPLAYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKVSALPEGGKVDQTFV 351

Query: 353 SA----LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
                 + NDL    AI  + +L   +  + D+         + G+E+ K    + I   
Sbjct: 352 ERFMSLINNDLAIPQAIALMWELLGSALNDADIKATARYFDSVFGLELDK-VEEEEIPRE 410

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           I +LV+ RL + K KK+  AD IR+Q+   G+ + D  +   
Sbjct: 411 ILELVELRLQMKKQKKYQQADEIRQQVAEFGYRINDAGDSST 452


>gi|254444496|ref|ZP_05057972.1| cysteinyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198258804|gb|EDY83112.1| cysteinyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 475

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/489 (33%), Positives = 247/489 (50%), Gaps = 54/489 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K++  +NTL RK         + + MY CGPTVY  AHIGN R  +  DV+ R+L+    
Sbjct: 2   KQVTFHNTLSRKAEPIVPTKGNVVGMYCCGPTVYAQAHIGNFRTFLAQDVMRRVLQTAGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +VRNITD+DDK I R+ +E   +      +  T   TQ F  D  R   LAP  +
Sbjct: 62  K--VIHVRNITDVDDKTIARSIEEGRQL------TEFTEHWTQIFHADCERFNMLAPQIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRK-----IDEQKMG 176
           P+AT HI + I +I+ +I  GHAY ++   + F  SS   YG  SR K      D     
Sbjct: 114 PKATEHIAEQIAMIEQLIQRGHAYASDDGSVYFRVSSFDEYGKLSRLKERQLLTDAPAND 173

Query: 177 TRVPEKYHKKNPA-DFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           T V    + ++ A DF++WK   P   +  W+SPWG+GRPGWH+ECSAM+  YLG   DI
Sbjct: 174 TPVDSDEYTRDSAADFVMWKSRKPTDGDVYWDSPWGQGRPGWHLECSAMAMKYLGNNLDI 233

Query: 234 HGGGLDLIFPHHENEIAQSCCADRI-EKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H GG+DL FPHHENEIAQS C+    +K    WIH   L ++G+KMSKS  NF T++++ 
Sbjct: 234 HSGGVDLTFPHHENEIAQSECSCGHEKKFFKYWIHAAHLLVDGQKMSKSLDNFYTVDDI- 292

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------- 344
                  + +P  V+R A+    YR+ I+FT+  L  A+  L +  + S           
Sbjct: 293 -----AAKGYPPVVLRYALTSGAYRQTINFTLDTLGAAQSALVRLKKFSDELLAEAGLKR 347

Query: 345 --------------GIIDPAVLSA---LYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                            DP    A   L +D+N   A+ A+    +       L+P F+ 
Sbjct: 348 ASVLKEIAKGKHLHDDWDP-FADAWKKLTHDMNIAGALGAIFTAIKAKPGPEALIP-FHK 405

Query: 388 SAHILGIEVCK---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               LG ++ +   E    ++   I+ L Q+R    + K +++AD +R +L + G+   D
Sbjct: 406 LIFALGYDLDQVVIEKPKVDVPEDIKILAQKRWDAKQAKDWATADALRDELAAAGWKALD 465

Query: 445 YKNPDNGQR 453
            K+  + ++
Sbjct: 466 RKDGFDLEQ 474


>gi|308271740|emb|CBX28348.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 761

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 141/478 (29%), Positives = 226/478 (47%), Gaps = 51/478 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + ++NT+ R    F+ I P    +Y CGPTV+D  H G  R  +  D+L R L +  
Sbjct: 303 KINLMLFNTITRSKEPFEPIHPGKASVYSCGPTVHDRMHPGECRRFVFSDLLCRYLEFRG 362

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V ++ NITD+DDK I  + +    +      S  T K    F +D   L      +
Sbjct: 363 Y--SVKHIMNITDLDDKTINGSEKAGLEL------SEFTEKYINLFKEDLNLLGIKPAEN 414

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            P+A+ HI  M+ L + ++  G+AYE    + FD S   +YG  S   I++ ++G  V  
Sbjct: 415 YPKASEHIEDMVLLAEKLVKKGYAYEKLRSLYFDISRFSDYGKLSGIDINKIRIGATVDL 474

Query: 181 EKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++Y K NP DF L KR+   E        + WG  RP WHI+C+AM+  YLG+ FDIH  
Sbjct: 475 DEYEKDNPRDFTLMKRAKLSELRRGIYTATDWGNVRPSWHIQCAAMAMKYLGESFDIHTS 534

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
             +LIFPHHENEIA S      +  A  W+H   + ++G+K+ +  G  + +++L+    
Sbjct: 535 SRELIFPHHENEIAISKALTG-KALAKFWMHCDRVLVDGKKLDEIKG-RLCVSDLINM-- 590

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQT 340
                +    IR  ++ THYR+PI F+ +RL +A   L +                 P+ 
Sbjct: 591 ----GYSGREIRYWLISTHYRKPIVFSNKRLEDARKSLKRLDTCVHALLDIKAGEPYPEI 646

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
                 I    + A+ +DLN  +A+ ++ ++ R+                 +L  F    
Sbjct: 647 DQLLYDIKNGFIGAMDDDLNISAALSSIFRIVRKINVLSRDKKIDPAGAKKILDAFKDID 706

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +L +    +  N      +++L++ER      K + +AD IRK+LES G  + D K 
Sbjct: 707 SVLNV---FDFGNCYFDPEVKRLLEERDRARTEKNWGAADDIRKKLESMGVAIRDRKT 761


>gi|76799247|ref|ZP_00781419.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76585400|gb|EAO61986.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 320

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 132/334 (39%), Positives = 195/334 (58%), Gaps = 19/334 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IKIY+T+ R + +F  ++   + MYVCGPTVY++ HIGNAR ++ FD + R   Y   + 
Sbjct: 2   IKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+ N TD+DDKII+ A +              + K    F++D   L     T  PR
Sbjct: 61  -VNYISNFTDVDDKIIKGAAE------AGMDTKSFSDKFISAFMEDVAALGVKPATKNPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
             +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + + +++ ++G       E
Sbjct: 114 VIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDGE 173

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++  LG   DIHGGG DL 
Sbjct: 174 GEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADLE 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GNFIT++++L       +S
Sbjct: 234 FPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------KS 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
               VIR  +    YR+P++FT + + +AE+ L+
Sbjct: 286 VDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLN 319


>gi|108804992|ref|YP_644929.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|123068971|sp|Q1AU11|SYC_RUBXD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|108766235|gb|ABG05117.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 470

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 166/482 (34%), Positives = 239/482 (49%), Gaps = 54/482 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ ++L   + E        + +YVCGPTVY+  HIGN R  + +DV  R LR    
Sbjct: 1   MSVKVRDSLSGGLVEV--GGDGRVGIYVCGPTVYNHIHIGNVRGHLFWDVAVRFLRSRGY 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITDIDDKII RA +E        +   I  + T  F +    L    P  +
Sbjct: 59  --RVKFVWNITDIDDKIINRANEE------GVSWKEIVRRYTDSFHERLRLLGIGMPDVE 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT HIP+MI LI+ +I  GHAY A N ++ +   + P YG+ S+++ +E K+ T   +
Sbjct: 111 PRATEHIPEMISLIEELIRRGHAYPAPNGDVYYAVETFPRYGALSKQRPEEMKI-TEKGQ 169

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HK+NP DF LWK S P EP WESPWG GRPGWHIECSAM   +L    DIHGGG D+ 
Sbjct: 170 TGHKRNPLDFTLWKASKPGEPSWESPWGPGRPGWHIECSAMVEKHLPGGADIHGGGSDIR 229

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE+AQSC A         W H+G + +  +KM+KS GN +   E           
Sbjct: 230 FPHHENELAQSCGAHPDRPFVRAWAHHGMVRMAAQKMAKSVGNVVDAREATLKHGR---- 285

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTE----AEILLSKWPQTSTSK----------GII 347
                IR+ +L +HY +PID++ + L E     E LL  + + S S+          G +
Sbjct: 286 ---DAIRMWLLQSHYSQPIDYSDEILEEKRRSCERLLRLYREISRSEASSPLSDRLAGEL 342

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEV 396
                +A+  D NT  AI AL   A  + +              L         +LG +V
Sbjct: 343 RERFDAAMREDFNTPEAIAALFDAASGAGREISSRPSAAGEFASLKEALQELLGLLGFDV 402

Query: 397 CKEHLNKNISIAIEKLVQERLILL----------KMKKFSSADYIRKQLESKGFILEDYK 446
             E +++   + I    +    +L          + +++  AD +R++L  +G+ +ED  
Sbjct: 403 AGERVSEVDGVRIRHAGEAPGEVLERVARRERARRRREWPEADRLREELLREGWAIEDTA 462

Query: 447 NP 448
             
Sbjct: 463 AG 464


>gi|269929418|ref|YP_003321739.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269788775|gb|ACZ40917.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 399

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 142/411 (34%), Positives = 213/411 (51%), Gaps = 35/411 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L ++  EF  ++   +RMYVCG T YD  H+G+A   + FDV+ R  ++     
Sbjct: 1   MRLYNSLTQRKEEFTPLNGKTVRMYVCGITPYDTTHMGHAMTYLTFDVINRYCQHLG--W 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TDIDD I+ +AR+      + +    +  +  +QF +D   +  L P+  PR
Sbjct: 59  RVKYVQNVTDIDDDILRKARE------VGEPWDRLGDRYIRQFQEDLNSINILPPSVYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           A+  IP +I +I  ++  G AY  +  + F  +S P+YG   R   +E    +      P
Sbjct: 113 ASEEIPTIIEMISTLVERGMAYVRDGNVYFRVASDPDYGHLCRCSTEEMIALSAERGADP 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K+NP DFILW+   P EP W+SPWG GRPGWHIECSAM+  YLG   DIHGGG DL
Sbjct: 173 NDPRKENPLDFILWQAQQPGEPAWDSPWGPGRPGWHIECSAMAYRYLGPQIDIHGGGGDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           I+PHHE+EIAQ+    + E  A  W+H   +  +G KMSKS GN + + ++L       R
Sbjct: 233 IYPHHESEIAQTEAYTQKEPFARFWVHVAMVRYQGEKMSKSLGNLVLVRDVL-------R 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQR------LTEAEILLSKWPQTST---SKGIIDPAV 351
              A  +RL +L  HYRE  ++          L +      + P  S           A 
Sbjct: 286 DHTADALRLYLLSNHYRESFEYQDDGPARFEPLADLLRRAVRLPGGSGPALDVADTHRAF 345

Query: 352 LSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFNASAHILGIE 395
             A+ +DL+T + IQ L ++       A       +   +   +A ILG++
Sbjct: 346 TDAIGDDLDTPTGIQVLREMGEQVISAAEAGRDVTEARELLRQAAGILGLQ 396


>gi|57167801|ref|ZP_00366941.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020923|gb|EAL57587.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 460

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 148/489 (30%), Positives = 231/489 (47%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ +++ ++  E   +D  N+ +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MKLMDSVLKEKIE---LDQDNVNIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLSLGY-- 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++            +++ +       + +D   L  L P  +PR
Sbjct: 56  RVQFARNYTDIDDKILKK------MSESGKSLNELVEFYIANYERDMKALNVLEPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  M+ LI  +  +G  Y   + + FDTS   +Y S S R  +E    +R+  +  
Sbjct: 110 ATYYIEPMLDLIHKLSKNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENV--SRLSNEVE 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  ++S +G+GRPGWH EC AM     G   DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGVDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  CA      A IW+HNGF+ + G KMSKS  N   + + L       + +  
Sbjct: 225 HENEAAQCRCA-CKRTLAKIWLHNGFVKINGEKMSKSLNNSFFLKDAL-------KDFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------------I 347
             +R  +L +HYR   ++++  L   +  L K+ +      +                 I
Sbjct: 277 EALRFYLLSSHYRAHFNYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHSNI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L +    +    D           +    +  A I G   
Sbjct: 337 AKQILEVLSDDLNISKALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIFGFGF 396

Query: 397 CKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             E+L       K +   I+  + +R    K K F+ AD IR+ L   G  L+D      
Sbjct: 397 MDENLYFQWGVAKELKEKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQDT----- 451

Query: 451 GQRMTRWKQ 459
             + T W++
Sbjct: 452 -PQGTIWEK 459


>gi|322369387|ref|ZP_08043952.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551119|gb|EFW92768.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 495

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 144/505 (28%), Positives = 223/505 (44%), Gaps = 71/505 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + NTL  +   F+  DP ++ +Y CG TV DFAH+G+AR  I  DV++R L +   
Sbjct: 1   MTLFVTNTLTGEREPFEPGDPDSVLLYYCGLTVSDFAHLGHARGWIHTDVMHRWLEHLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+++KI  R         + D  + +      Q ++D   L        
Sbjct: 61  D--VHHVENFTDVNEKITAR----VGEDDLGDDEADVARTFITQVIRDMRDLNLKRADVY 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P++  LI+ ++  G+AYE+N  + FD ++  +YG  S ++++E +      E+
Sbjct: 115 PRVSEHLPEITDLIETLVEKGYAYESNGSVYFDVTTFEDYGKLSNQRVEEMEAQGEGDER 174

Query: 183 YHKKNPADFILWKR--------------------STPMEPGWESPWGRGRPGWHIECSAM 222
             K++P DF LWK                     S P    W+SPWG GRPGWHIECSAM
Sbjct: 175 GEKRHPGDFALWKADGVSEGAVEEHRDPDTEYAVSHPSGQTWDSPWGEGRPGWHIECSAM 234

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S  +LG+  DIH GG DL+FPHHENEIAQS  A    + A  W+H   L  EG KMS S 
Sbjct: 235 SMEHLGETIDIHVGGQDLVFPHHENEIAQSEAATG-HQFARYWLHVRLLETEGEKMSSSL 293

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----- 337
           GN+ T+   +           A  +R+ +L T Y     F+ + L EA     +      
Sbjct: 294 GNYSTVRGAISEIG-------ANAVRMFLLSTSYANRQTFSDETLNEAVERWDRLSDGYD 346

Query: 338 -----------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
                             +   +          A+ +D NT  A+ AL  L     ++ D
Sbjct: 347 RAVEALDGPDARTKVEDDELRQAVTETREEFADAMNDDFNTRRALAALLDLVTAVNRHAD 406

Query: 381 ------------LLPIFNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKF 425
                        +  F      +LG  +  E           +E ++  R        +
Sbjct: 407 AHEEYDYDGLKSAVETFEELGGDVLGFSLGGEAGGDVRLAEDLVELVLDLREGERDAGNY 466

Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
             AD +R  L++ G  ++D  +  +
Sbjct: 467 DRADALRDDLQALGVDVQDSDSGPS 491


>gi|297242895|ref|ZP_06926833.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
 gi|296889106|gb|EFH27840.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
          Length = 545

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 151/542 (27%), Positives = 225/542 (41%), Gaps = 110/542 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +YNT       F    P  + MYVCG TV    HIG+ R  I FD++ R +     
Sbjct: 18  ENLHLYNTASHSTNTFVPKKPGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A +   +               ++F K    L  LAPT +
Sbjct: 78  K--VTFVRNVTDIDDKIMKKANESGQNWW------ERAYIYEREFTKSYNTLGVLAPTVE 129

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT HI  M+ LI+ +I  GHAY  N         + FD  S  +YG  + +  ++ + 
Sbjct: 130 PRATGHITDMVELIERLIERGHAYVINDSDGNPTGNVYFDVPSWEHYGELTHQNQNQNET 189

Query: 176 GTR--------------------------VPEKYHKKNPADFILWKRSTPME---PGWES 206
                                              K +P DF LWK     +     W++
Sbjct: 190 CADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWKT 249

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           P+G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A      A++W+
Sbjct: 250 PFGEGRPGWHIECSAMSHRYLGDDFDIHGGGLDLRFPHHENEMAQTRAAGWES--ADVWM 307

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+ ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q 
Sbjct: 308 HSAWVTAKGEKMSKSLGNGLSVPVVLANN-------SAWVVRYALGAVQYRAMLEWSDQA 360

Query: 327 LTEAEILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQAL 368
           L E++    +        G                   +      A+ +D+N   AI  +
Sbjct: 361 LVESKSAYDRIMNFLERAGRLLDKKPTCEEVHSVNADELPEDFTRAMNDDINVSGAIAEI 420

Query: 369 HKLARESTKNHDLLP--------------------IFNASAHILGIEVCKEHLNKN---- 404
               R+     D                          A    LG++   +    N    
Sbjct: 421 FTTIRQGNALIDDCSKDSSQAQSESVQKLIYLAVLQVRAMLDTLGLDPYAKTWASNDNQS 480

Query: 405 ---------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                          +   I   ++ R    K K F++AD IR  L + G ++ D     
Sbjct: 481 SAEGSNGKESKEYSALDSLITLQLKARADARKAKDFATADAIRDALNNAGIVIVDTSQGS 540

Query: 450 NG 451
           + 
Sbjct: 541 SW 542


>gi|283954375|ref|ZP_06371896.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794174|gb|EFC32922.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 463

 Score =  438 bits (1127), Expect = e-120,   Method: Composition-based stats.
 Identities = 157/489 (32%), Positives = 235/489 (48%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVIKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL--LANGN 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++            ++  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAKSGQSLEEITEFYIKSYEEDMKALNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +      Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYIAAMLDLIKKLAKGEFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C       ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRILANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  ++  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENSKKRLDKFYRLKKRVELSEISDFDVLNNIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L AL +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILKALNDDLNISKALALLDDFISNANLELDKESKNKFLKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IE L+ ER    K K FS+AD IR+QL SK  IL D  N   
Sbjct: 397 MDTTLYFQWGVSKEEQEEIEGLILERTEAKKNKDFSTADAIREQLSSKKIILLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|311063769|ref|YP_003970494.1| cysteinyl-trna synthetase CysS [Bifidobacterium bifidum PRL2010]
 gi|310866088|gb|ADP35457.1| CysS Cysteinyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
          Length = 540

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 155/540 (28%), Positives = 227/540 (42%), Gaps = 106/540 (19%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y+T    ++ F  I P  + +YVCG TV    HIG+ R  + FDV+ R +     +
Sbjct: 24  GLKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ 83

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT+VRN+TDIDDKI+++A                     ++F +    L  L PT++P
Sbjct: 84  --VTFVRNVTDIDDKILDKAAAAGQQWWAR------AYFYEREFTQAYDTLGVLPPTYEP 135

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRKI------ 170
           RAT H+  MI LI+ II +GH Y            + FD +S P+YG  + +K       
Sbjct: 136 RATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEAD 195

Query: 171 ------------------DEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWG 209
                             D+            K +P DF LWK   P +P    W +P+G
Sbjct: 196 EAAAVADLMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFG 255

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAMS  YL  +FDIHGGGLDL FPHHENE+AQ+         A  W+H+ 
Sbjct: 256 VGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAVGYES--AARWMHSA 313

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++  +G KMSKS G  +++  +L           A V+R A+    YR  ++++ Q L E
Sbjct: 314 WVTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVE 366

Query: 330 AEILLSKWPQ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           A+    +                        S   +    +SA+ +D+N   A  A+   
Sbjct: 367 AQAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTA 426

Query: 372 ARESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------ 402
            R        L                     A    LG++   E               
Sbjct: 427 IRNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESR 486

Query: 403 --KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
               +   I + +  R    K + F+ AD IR  L + G  +ED      G + + W  K
Sbjct: 487 EHDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 540


>gi|86152065|ref|ZP_01070277.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|85840850|gb|EAQ58100.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
          Length = 462

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 157/489 (32%), Positives = 234/489 (47%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQG--N 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSGQTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE  Q  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEATQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR+QL SK   L D  N   
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|187735526|ref|YP_001877638.1| cysteinyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187425578|gb|ACD04857.1| cysteinyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 471

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 151/485 (31%), Positives = 234/485 (48%), Gaps = 52/485 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+T  R   +   +D   +R Y CGPTVY   HIGN R  ++ DV  R+L    G  
Sbjct: 2   LHLYDTRTRTAQDISPMDGKTLRFYCCGPTVYGPTHIGNFRTFVMQDVFRRVLEL--GGV 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             T++RN+TD+DDK I  +++         +++  T+     F +D   L CL P  +P 
Sbjct: 60  PTTHIRNLTDVDDKTIRDSQK------AGVSLAEFTAGWADLFHRDCAALNCLPPHAEPS 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT-----R 178
           A  HIP+ I ++Q ++  GHAY + +  + F  SS P YG  S     E  +G       
Sbjct: 114 AVGHIPEQIRMVQTLVEKGHAYVSEDGSVYFRISSFPEYGRLSHLDERELDLGKTANTRS 173

Query: 179 VPEKYHKKNPADFILWKRSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             ++Y K + ADF+LWK   P +    W SPWG GRPGWH+ECSAM   Y G  FD+H G
Sbjct: 174 NADEYEKDSVADFVLWKSRRPEDGNNFWPSPWGEGRPGWHLECSAMIHKYFGNDFDLHSG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL+FPHHENE+AQS CA      A +W H   L ++G KMSKS GN  T+ +L     
Sbjct: 234 GVDLVFPHHENEVAQSRCACGGG-FARLWFHITHLLVDGGKMSKSLGNMYTLADL----- 287

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIID 348
                     +R  +   +YR P++FT+  L +A+  L++  +        + T      
Sbjct: 288 -DKLGHRPSAVRYVLAGGYYRRPLNFTLSSLEDAKAALNRLSKFDMQLRNASGTDSVPSY 346

Query: 349 PAVLSA-------------LYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNAS 388
               +A             L +DLNT  A+  +    R++        +   L   F+  
Sbjct: 347 EEFCAAFPELGIFQPAWDSLNDDLNTPEALGHVFSAIRKADIPSLSPEEAARLRNAFHFI 406

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
               GI +  E   +     I  L  +R    + + ++ AD +R ++ + G++++D K+ 
Sbjct: 407 LAAFGI-ILPEEGQEEAPEEIRTLADQRWQAKQNRDWTEADRLRAEVAALGWVIKDRKDG 465

Query: 449 DNGQR 453
            +  R
Sbjct: 466 YDLAR 470


>gi|154508503|ref|ZP_02044145.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
           17982]
 gi|153798137|gb|EDN80557.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
           17982]
          Length = 485

 Score =  438 bits (1126), Expect = e-120,   Method: Composition-based stats.
 Identities = 153/501 (30%), Positives = 244/501 (48%), Gaps = 68/501 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y++   ++     + P  + +Y+CG TV    H+G+ R  + FD L R LR    E 
Sbjct: 2   LHLYDSKSARVQPLTPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++ +                +  ++F +    L   +PT++PR
Sbjct: 61  -VTYVRNVTDIDDKILHKSAE------AGWDWWAWAYRFEREFTQAYETLGVQSPTYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--- 180
           AT HIP+ + L+Q +I  GHAY + +  + FD  S P+YGS +R+++ + +         
Sbjct: 114 ATGHIPEQLDLVQRLIDAGHAYSDGHGNVYFDVHSQPDYGSLTRQRLADMRTTEDDAQID 173

Query: 181 --EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK S P EP    W+SPWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 174 EVVEAGKRDPRDFALWKVSKPSEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIHG 233

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHENE AQS  A    + A +W+HN ++  +G KMSKS GN ++I  L E  
Sbjct: 234 GGIDLRFPHHENEQAQSHGA--GWEFARLWVHNAWVTTKGEKMSKSLGNVLSIGALTE-- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQ 339
                 +PA  +R A+   H+R  I++  + L  A     K+                 +
Sbjct: 290 -----EYPAVAVRWALSTVHHRSAIEWGAETLPAAYAAWEKFSTFVARAIEAAGEAPASE 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAH 390
            + +   +  A ++A+ +DLN   A+  LH+  +                   +  +   
Sbjct: 345 IALAPADLPEAFVAAMDDDLNVAGALAVLHEHLKAGNAALAAGDQAAVYCEQVLVRSMLD 404

Query: 391 ILGIEVCKEHLN-----------------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           +LG++   E                      +   ++ +++ER      K ++ AD +R 
Sbjct: 405 VLGLDPASEQWRGQAGIGAGRSGAAAAEHSALDALVQAVLEERAAARAAKDWARADELRD 464

Query: 434 QLESKGFILEDYKNPDNGQRM 454
           +L + G  + D ++       
Sbjct: 465 RLAAAGVTVADGRDGATWSVG 485


>gi|153951726|ref|YP_001398277.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|166200142|sp|A7H447|SYC_CAMJD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|152939172|gb|ABS43913.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 462

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 158/489 (32%), Positives = 233/489 (47%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ ++  ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSATKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL--LANGN 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSCQTLEEITEFYIKSYEEDMRTLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYIIAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSSRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K  +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKIYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISNANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR+QL SK   L D  N   
Sbjct: 397 MDATLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLSSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|224436533|ref|ZP_03657542.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143036|ref|ZP_07805229.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128067|gb|EFR45684.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 504

 Score =  437 bits (1125), Expect = e-120,   Method: Composition-based stats.
 Identities = 153/525 (29%), Positives = 252/525 (48%), Gaps = 93/525 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I ++++++++  +F+ I P  +R+YVCGPTVYD AH+G+AR  I FD+  RL  + + + 
Sbjct: 2   ITLFDSIKKQKLKFEPISPKQVRIYVCGPTVYDDAHLGHARSSIAFDLWRRL--FLFLDF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + +N TDIDDKII+++      +    ++  ++ +  + ++ D   L  L P  +P+
Sbjct: 60  KVIFAKNFTDIDDKIIKKS------LQNGISVEEVSERYIELYLNDMHALGILRPDLEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+++PQM  +I+ ++  G+AY+  NN++    +    YGS S+R   EQ   +R+    
Sbjct: 114 ATSNLPQMHEMIEQLLQKGYAYKGENNDVYLSIAKDKAYGSLSQRTTHEQNQ-SRITNAN 172

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGK------------- 229
            K+  +DF LWK      +  ++SP+G+GRPGWHIECSAM   +L               
Sbjct: 173 DKQEESDFALWKGYKGEDDIAYDSPFGKGRPGWHIECSAMIEKHLAYDMREKQEYEKQEF 232

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG DL+FPHHENE +Q+ CA   E  A  W+HNGF+N+ G KMSKS GN   I 
Sbjct: 233 AIDIHAGGADLLFPHHENEASQTRCATGRE-LAKYWLHNGFVNINGEKMSKSLGNSFFIK 291

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------- 339
           + L       + +   ++R  +L  HYR  ++F  + L +++  L K  +          
Sbjct: 292 DAL-------KVYDGEILRNYLLGVHYRLALNFNEEDLLQSKKRLDKIYRLKKRIMAERI 344

Query: 340 ----------------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
                                       T  ++      +L AL +D N   A+  + ++
Sbjct: 345 ADSIPQTKALDSTELADQLESLNTLKTHTKNAQDSFIKPLLEALSDDYNISKALSIIEEM 404

Query: 372 ARESTKNHDLLPIFNA-----------SAHILGI------EVCKEHLNKNISIAIEKLVQ 414
              S    D  P   A             ++LG+         +  L +     IE  +Q
Sbjct: 405 LSISNDYLDKNPKDKAYKLAISGNLACIEYLLGLGDKDPTLYFQLGLTEQERQDIESKLQ 464

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            R    K K +  AD IR +L+S+G  + D        + + W++
Sbjct: 465 ARTEAKKQKNYVLADSIRDELKSQGIEIMDT------PQGSTWEK 503


>gi|313126857|ref|YP_004037127.1| cysteinyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293222|gb|ADQ67682.1| cysteinyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 495

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 152/505 (30%), Positives = 231/505 (45%), Gaps = 71/505 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + NTL  +  EF+  D  ++ +YVCG TV D AH+G+AR  +  DV++R L +   
Sbjct: 1   MTLSVTNTLTGEREEFEPQDDDDVLLYVCGLTVSDDAHLGHARLWMHADVMHRWLEHEGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V N TD+++KI  R         +  +   +    T   ++D   L        
Sbjct: 61  --TVHHVENFTDVNEKIAAR----IGDDELGQSEPDVARHFTDHVIRDMRGLNLKRAEVY 114

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+PQ+I LI+ +  +G+AYE+N  + FD ++  +YG  S +KI+E +      E+
Sbjct: 115 PRVSEHVPQIIDLIETLTENGYAYESNGSVYFDVTAFEDYGKLSNQKIEEMEAQGEADER 174

Query: 183 YHKKNPADFILWKR----------STPME---------PGWESPWGRGRPGWHIECSAMS 223
             K++PADF LWK             P E           WESPWG GRPGWHIECSAMS
Sbjct: 175 AEKRHPADFALWKAGAVSPDAVAEHRPEELDPIEDACGETWESPWGEGRPGWHIECSAMS 234

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             +LG   DIH GG DL+FPHHENE+AQS  A   +  A  W+H G L +E  KMS S G
Sbjct: 235 MTHLGDTIDIHVGGRDLVFPHHENEVAQSEAATG-QTFARYWLHVGLLQMEDDKMSSSLG 293

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---- 339
           NF T+++ L+        +   VIR   L T Y     F+   + EAE    +  +    
Sbjct: 294 NFFTVSDALD-------EFGVDVIRTFYLSTGYGAEQTFSDSAMAEAEERWDRLERAYET 346

Query: 340 -----------TSTSKGIIDPA-------VLSALYNDLNTVSAIQALHKLARESTKN--- 378
                       S     +  A          A+ +D N   A+ AL +LAR    +   
Sbjct: 347 AIEACDSPDAYASVEDADLREAIETTQTDFQKAMNDDFNVREAMAALIELARAVNTHVND 406

Query: 379 ---------HDLLPIFNAS-AHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKF 425
                     + +  F      + G+         ++ IA   +  L+  R    +   +
Sbjct: 407 ADEYDYRGLREAIETFEDLGGDVFGLSFGDAADGGDVEIAEDLVSLLLNVREAEREAGNY 466

Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
             AD +R +L++ G  + D ++  +
Sbjct: 467 ERADELRDELDALGVEVHDSEDGPS 491


>gi|222823636|ref|YP_002575210.1| cysteinyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254781231|sp|B9KFX4|SYC_CAMLR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|222538858|gb|ACM63959.1| cysteinyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 460

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 146/479 (30%), Positives = 231/479 (48%), Gaps = 51/479 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +  ++++ +K  EF   +     +Y+CGPTVYD AH+G+AR  + FD L R+L     E 
Sbjct: 1   MVFFDSVLKKKCEFIPHEAKKANIYLCGPTVYDDAHLGHARSSVCFDFLRRVLLASGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++ ++         ++  IT+   +++ +D   L  L P  +P+
Sbjct: 60  -VVFARNYTDIDDKILKKMQES------GKSLKEITNFYIKRYEEDMQALNILEPDFKPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I QMI  I+ ++    AY+  + I FDTS    Y   S+R +++ +  +R+ E   
Sbjct: 113 ATAYIEQMITYIEKLLELNLAYKLEDGIYFDTSKDDKYFYISKRNLEDNQ--SRLEESVA 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KKN +DF+LWK     E  + + +G+GRPGWH EC  M         DIH GG+DL+FPH
Sbjct: 171 KKNDSDFVLWKF---DEKFYPASFGKGRPGWHTECVVMIESIFKDKLDIHAGGIDLLFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE  Q  C +  E  AN W+HNGF+ + G KMSKS GN   + + L       + +  
Sbjct: 228 HENEACQCRCKNNHE-LANFWLHNGFVQINGEKMSKSLGNSFFLKDSL-------KLFNG 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------KGIIDPAV 351
            V+R  +L  HYR   ++ ++ L  A+  L K+ +                 +  +   +
Sbjct: 280 EVLRFYLLSVHYRAHFNYALEDLQAAKKRLDKFYRLKKRLNLNAFIDEKTIIESKVSQNI 339

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV---- 396
           L  L +DLN   A+  L +   ES    D           L       + I GI      
Sbjct: 340 LDVLNDDLNASKALALLDEFINESNIYLDQNPKDKAYKIQLEKTLKELSFIFGIGFIDTI 399

Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
              +  +++     IE+ +  R    + K +  AD IR  L  +  +L D  N    ++
Sbjct: 400 KYFQFGISEEKCQEIEEKITLRNKAKQEKNYVLADQIRDDLAKENILLMDTPNGVVWEK 458


>gi|86153279|ref|ZP_01071483.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843005|gb|EAQ60216.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 462

 Score =  436 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 158/489 (32%), Positives = 234/489 (47%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQG--N 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSGQTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFINNANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F+ AD IR+QL SK   L D  N   
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKSKDFNIADTIREQLSSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|157415073|ref|YP_001482329.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|172047114|sp|A8FLL5|SYC_CAMJ8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|157386037|gb|ABV52352.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747715|gb|ADN90985.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932527|gb|EFV11462.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 462

 Score =  436 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 157/489 (32%), Positives = 235/489 (48%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVAKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVL--LANGN 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSGQTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +L +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR++L SK   L D  N   
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIRERLSSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|306817738|ref|ZP_07451480.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
 gi|304649552|gb|EFM46835.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
          Length = 538

 Score =  436 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 170/546 (31%), Positives = 250/546 (45%), Gaps = 117/546 (21%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ + P  + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLTPGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK-----MGTR 178
           AT HIPQ I L+Q +I  GHAY +    + F   S+P+YGS + +++ +           
Sbjct: 113 ATGHIPQQIALVQRLIDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------ 343
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K+    ++            
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKFAGFVSAVQSAAGCAGMSN 343

Query: 344 ------------------KGIIDP-------------------AVLSALYN-----DL-- 359
                              G  DP                   A  S L +     D   
Sbjct: 344 SRGAIPDNAVNSSKPLMNPGEPDPVPPASAPLTDKYGDENPDLARQSELADVTLPEDFVA 403

Query: 360 ------NTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                 N   A+ ALH+  +         ++           A   +LG++        +
Sbjct: 404 ALDDDLNVPGALPALHRAVKTGHSALASGDTAAAAAQALQLRAMLDVLGLDPADSAWGAS 463

Query: 405 ISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            S A                    +  L+++R    + + ++ AD +R  LE+ G  + D
Sbjct: 464 DSGASAGAGSKNRKDPSVDCLKSLVAALLEQRGAAKQSRDWARADALRDLLEASGLQITD 523

Query: 445 YKNPDN 450
                 
Sbjct: 524 TPTGAT 529


>gi|283957215|ref|ZP_06374677.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791287|gb|EFC30094.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 462

 Score =  436 bits (1123), Expect = e-120,   Method: Composition-based stats.
 Identities = 157/489 (32%), Positives = 234/489 (47%), Gaps = 64/489 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQG--N 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSGQTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ  C     K ANIW+HNGF+ ++G KMSKS  N   I + L       + +  
Sbjct: 225 HENEAAQCRCG-CKRKLANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
             +R  +  +HYR   ++++  L  A+  L K+ +                     K  I
Sbjct: 277 EALRFYLSSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
              +L  L +DLN   A+  L      +    D           +    +  A I G   
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISSANLELDKENKNKILKQNIKEALSELAKIFGFGF 396

Query: 397 ------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  +  ++K     IEKL+ ER    K K F++AD IR+QL SK   L D  N   
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPN--- 453

Query: 451 GQRMTRWKQ 459
               T W++
Sbjct: 454 ---GTIWEK 459


>gi|290958497|ref|YP_003489679.1| cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|260648023|emb|CBG71131.1| putative cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 482

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 159/475 (33%), Positives = 231/475 (48%), Gaps = 37/475 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +++ + +Y+TL R  T F   + S +RMYVCGPTVY   HIGN R  +  D+  R+L   
Sbjct: 10  LRQSLSLYSTLSRTSTHFTPAEDSAVRMYVCGPTVYSAPHIGNMRTYLFADIARRVL--G 67

Query: 61  YGEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +    V    NITD+     +      +    +         +  K T+ F+ D  RL  
Sbjct: 68  FAGYSVQAAMNITDVGHLTSDADSGDDKMAKAAAAERATAWEVAEKYTEIFLADAGRLNI 127

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKM 175
           L      RAT HIPQ I LIQ +   G  Y  N+ + FDTS +P+YG  +     +  + 
Sbjct: 128 LPMDLVLRATQHIPQQIALIQRLEDKGVVYRTNDGMYFDTSFVPDYGKLTPNDTREHLRA 187

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVF 231
           G RV     K++  DF LWK S P  P     W SPWG G PGWHIECSAM+  YLG+  
Sbjct: 188 GERVAMG-EKRHATDFALWKFSPPEAPKRDMEWPSPWGVGFPGWHIECSAMAMEYLGESL 246

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINE 290
           D+H GG+D I  HH NEIAQS  A  +   +  W+H  FL LEG  +M KS GN IT++ 
Sbjct: 247 DLHLGGIDHIPVHHTNEIAQSETATGV-PFSRWWMHGAFLTLEGERRMGKSEGNKITLDT 305

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTS 343
           L+E        +     R  +L++HYR P+ F+   L +A   L +       W ++  +
Sbjct: 306 LVE------EGFDPLEFRYLVLLSHYRSPLSFSPTALEQAANALRRLRHRVAAWKKSVGA 359

Query: 344 KGIIDP--------AVLSALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGI 394
              +            + AL  DLN   A+  L +LAR+    +   L +  A   +LG+
Sbjct: 360 GAELPDCPDSPYLTRFVEALAEDLNMPRAVAELWQLARDPDVDDATKLSLILAFDEVLGL 419

Query: 395 EVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           ++         I  A+ +L QER  L   K+F  +D +R Q+ + G+ ++D    
Sbjct: 420 DLESASKEPAEIPDAVVRLAQERWELRSAKQFEESDKLRAQILAAGYNVQDGPEG 474


>gi|306842058|ref|ZP_07474730.1| cysteinyl-tRNA synthetase [Brucella sp. BO2]
 gi|306287808|gb|EFM59231.1| cysteinyl-tRNA synthetase [Brucella sp. BO2]
          Length = 452

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 189/453 (41%), Positives = 255/453 (56%), Gaps = 52/453 (11%)

Query: 52  VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           +L+RLLR+ YG + VTY RNITD+DDKI  RA +++P +P N+AI  +T     QF  D 
Sbjct: 1   MLFRLLRHVYGAQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADV 60

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFS 166
             L  L PT QPRAT H+ +M  +I  ++  G AY A + ++      +    P YG+ +
Sbjct: 61  AALGNLQPTVQPRATEHMDEMRAMIDRLVQRGVAYVAEDHVLFSPSAMNARKGPRYGALA 120

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMS 223
           RR +DE   G RV    +K++  DF+LWK S   EPGW SP G    GRPGWHIECSAMS
Sbjct: 121 RRSLDEMLAGARVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMS 180

Query: 224 SHYL--------------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
              L                 FDIHGGG+DL+FPHHENEIAQSCCA   E+ ANIW+HNG
Sbjct: 181 MAKLLEPFGGGLKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNG 240

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI---------RLAMLMTHYREPI 320
           FL +EG+KMSKS GNFITI ++L         W    +         RL+ML THYREPI
Sbjct: 241 FLQVEGQKMSKSLGNFITIRDVLNDGLPQLGEWGDNTVRDRWVGLAARLSMLQTHYREPI 300

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHKLAR 373
           ++T QRL E+   L +W      +G   P       AV +AL +DLN+ +AI AL    R
Sbjct: 301 NWTAQRLAESADELHRWYGLLRDEGFGAPEKLSQAGAVAAALCDDLNSWAAITAL----R 356

Query: 374 ESTKNHDLLPIFNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           ++ K+ D+  +    A ++G+         +V         + AI   + ERL  +  K 
Sbjct: 357 QAFKSRDVAALGEGMA-LMGLFDPYFVTASDVPIFARADVDASAIAARIAERLNFIDAKN 415

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           ++ AD IR +L  +G  L+D K+P  G+R+T W
Sbjct: 416 WAEADRIRDELLQEGVQLKDGKDPATGERITTW 448


>gi|281202238|gb|EFA76443.1| cysteinyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 633

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 162/516 (31%), Positives = 245/516 (47%), Gaps = 79/516 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +++IYN+L      F  I     +  Y+CGPTVYD +H+G+AR  I FD++ R+++ Y
Sbjct: 27  PSELQIYNSLTSSKVPFTPISGGKSVSWYICGPTVYDASHMGHARSYISFDIIRRIMKDY 86

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            G   V Y+ NITDIDDKII R+R++          + ++ K    F  D   L  L P 
Sbjct: 87  LGYD-VQYIMNITDIDDKIIIRSREQ------GITHTELSRKWENSFFDDLKALNVLPPD 139

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGT 177
              R T ++P+++  ++ II +G AYE+N  + FDT +      YG      +  +K+ +
Sbjct: 140 ALTRVTEYVPEIVTFVEKIIANGFAYESNGSVYFDTEAYMKVHEYGKLEPSSVGNEKLNS 199

Query: 178 RVPE----KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                      K+N  DF LWK+S   EP W SPWG GRPGWHIECSAM+S  LG   DI
Sbjct: 200 EGEGALSAGSDKRNNNDFALWKKSKEGEPKWNSPWGEGRPGWHIECSAMASDILGANIDI 259

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG DL FPHH+NEIAQS      ++  N +IH+G L ++G KMSKS  NFITI + L 
Sbjct: 260 HSGGEDLKFPHHDNEIAQSEAHYGCKQWINYFIHSGHLLIDGLKMSKSLKNFITIQDAL- 318

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-------------AEILLSK---- 336
                 + + A  IR+  L+  Y +P++++ + +T              A   + +    
Sbjct: 319 ------KKYTARQIRMLFLIHRYDKPMNYSTESMTNVIEIEKIFTEFFHAVKSIVRDAPQ 372

Query: 337 -----WPQTSTSKG----IIDPAVLSALYNDLNTVSAIQALHKLAREST-----KNHD-L 381
                W Q               V   L ++ NT  AI AL+ L + +      KN +  
Sbjct: 373 SLAQNWEQVDKDLNNQLLETKKKVHEFLLDNFNTTDAIHALNDLVKRTNVYLADKNRNPR 432

Query: 382 LPIFNASA-------HILGI---------EVCKEHLNKNISIAIEKLVQERLILLK---M 422
           L I N  A        + G+              ++   +   ++ LV+ R  +      
Sbjct: 433 LAILNNIATYITHILRVFGLVEGSAIGFGSGGSANVEDTLKPVLDALVEFRNQIRSSAIN 492

Query: 423 KKFSS----ADYIRKQ-LESKGFILEDYKNPDNGQR 453
           K FS      D++R + L   G  + D K+ ++  +
Sbjct: 493 KDFSKILQSCDHLRDEVLPLLGVKI-DDKSGNSVWK 527


>gi|257051141|ref|YP_003128974.1| cysteinyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256689904|gb|ACV10241.1| cysteinyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 496

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 142/508 (27%), Positives = 232/508 (45%), Gaps = 76/508 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL  +   F+  DP  + +Y CG T  D  H+G+AR  +  DV++R L +   
Sbjct: 1   MTLRVTNTLSGEREAFEPQDPDAVTLYYCGLTTSDPPHLGHARGWVHVDVMHRWLSWLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+++KI+ R  +         + + +     Q  ++D   L        
Sbjct: 61  D--VHHVENFTDVNEKIVARVGEVGG------SEADVARTYIQDVIRDMRSLNLKRAEVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P++I L++ +I  G+AYEAN  + FD ++  +YG  S + ++E        E+
Sbjct: 113 PRVSEHVPEIIDLVETLIDRGYAYEANGSVYFDVTAFEDYGELSNQTVEELDAQGDPDER 172

Query: 183 YHKKNPADFILWKR---------------STPMEPG------WESPWGRGRPGWHIECSA 221
             K++P DF LWK                + P E        W+SPWG+GRPGWHIECSA
Sbjct: 173 GEKRHPQDFALWKAGGVDPADIGAHRHADAAPAEDACRTAQTWDSPWGQGRPGWHIECSA 232

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS  +LG+  DIH GG DL+FPHHENE+AQS  A   ++ AN W+H G L     KMS S
Sbjct: 233 MSMTHLGETIDIHVGGQDLVFPHHENEVAQSEAATG-DRFANYWLHVGLLETGEEKMSSS 291

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWP 338
            GNF T+ + +     G       V+R  +L T Y     +T + L+EA      L +  
Sbjct: 292 LGNFATVEDAIAEYGLG-------VVRTFLLSTAYHSRAAYTEETLSEATKRFETLERGY 344

Query: 339 QTSTSKGI-------------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
           + +                        +  A+  A+ +D NT  A+ AL +      ++ 
Sbjct: 345 ERAVEAADSVDATAKTTDDALREAVETVREAIPRAMNDDFNTREALAALVEFTSAVNRHV 404

Query: 380 D------------LLPIFNASA-HILGIEVCKEHLNKNI----SIAIEKLVQERLILLKM 422
           D             + +++  A  +LG+ +     +          +E ++  R      
Sbjct: 405 DEVEPYDYRGLRRAIDVYDEFAVGVLGLPLGDGGSDTGDVRLAEDLVELVLDVRAQERDA 464

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDN 450
             +  AD +R +L + G  ++D  +   
Sbjct: 465 GNYERADELRDELAALGVEVQDSDDGPT 492


>gi|87200394|ref|YP_497651.1| cysteinyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|109894915|sp|Q2G5Q6|SYC_NOVAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|87136075|gb|ABD26817.1| cysteinyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 493

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 152/493 (30%), Positives = 237/493 (48%), Gaps = 55/493 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++N+L R++  FQ +     R+Y CGPTVY++ HIGN R  +  D+L R L +   + 
Sbjct: 15  LRLFNSLTRQLEAFQPVHAGEARVYSCGPTVYNYPHIGNMRAYVFADLLGRTLSFKGLK- 73

Query: 65  CVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            +T+V NITD+    DD      + E  +     +I  I    TQ + +D   L    P 
Sbjct: 74  -LTHVINITDVGHLTDDADEGEDKMEKMARAEARSIWDIAKHYTQAYWEDVKALNIRQPA 132

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
               AT ++PQMI   + I    H YE ++ + FD S++ +YG  +R + +E +   R+ 
Sbjct: 133 RWTIATEYVPQMIAFAERIAAK-HCYELDSGLYFDVSTVADYGRLARAQTEEGE--GRIE 189

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
               K+N ADF +W+++ P E     W+SPWGRG PGWH+ECS MS   LG  FDIH GG
Sbjct: 190 AVEGKRNGADFAIWRKTPPGEKRQMEWDSPWGRGAPGWHLECSVMSGEVLGFPFDIHTGG 249

Query: 238 LDLIFPHHENEIAQS---CCADRIEKTAN----IWIHNGFLNLEGRKMSKSNGNFITINE 290
           +D    HH NEIAQ+   CC + ++  AN    IW+HN FL     KMSKS+G F+ +  
Sbjct: 250 IDHREIHHPNEIAQNQAFCCTNGLDVPANSGARIWMHNNFLVERSGKMSKSSGEFLRLQL 309

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-----------SKWPQ 339
           L++      + +     RL  L  HYR  ++F+ + L  A   L            + P+
Sbjct: 310 LID------KGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRMLIAVGQLKERAPE 363

Query: 340 TSTSKG----IIDPAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHILGI 394
            +   G           +A+ +DLNT  A+    ++   +     D L    A   +LG+
Sbjct: 364 VAAQPGPRFTPFLERFDAAMSDDLNTAVALTVFEEVLGLKKVDPADKLAAVAAMDAVLGL 423

Query: 395 EVCK---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            + +             +     IE L+  R      K F+ +D +R Q+ +KG  + D 
Sbjct: 424 GLLELDRRALRIRPKGVEIDEAGIEALLDARKAARAEKDFARSDALRDQIAAKGVEVMDG 483

Query: 446 KNPDNGQRMTRWK 458
            +P   +    WK
Sbjct: 484 -DPLGWE----WK 491


>gi|296282436|ref|ZP_06860434.1| cysteinyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 483

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 146/493 (29%), Positives = 222/493 (45%), Gaps = 53/493 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++K++N+L R++  F  +     R+Y CGPTVY++ HIGN R  +  DVL R L +   
Sbjct: 5   PQLKLFNSLNRQLEPFVPVHEGEARVYTCGPTVYNYPHIGNMRAYVFADVLGRTLSWRGY 64

Query: 63  EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  +T++ NITD+    DD      + E  +     +I  I    TQ F  D   L    
Sbjct: 65  K--LTHIINITDVGHLTDDADAGEDKLEKMAAKQKQSIWDIAEHYTQAFKADVAALNIRE 122

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
           P     AT++I QMI   + I    H Y+  + + FD S++ +YG  +R   +E +   R
Sbjct: 123 PAEWSVATDYIEQMIDFAKQIEAK-HCYQLESGLYFDVSTVEDYGRLARAVTEEGE--GR 179

Query: 179 VPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           +     K+N ADF +W+ +   E     W+SPWGRG PGWH+ECS M    LG  FDIH 
Sbjct: 180 IDTVEGKRNAADFAIWRTTPEGETRQMEWDSPWGRGAPGWHLECSVMGGKLLGFPFDIHT 239

Query: 236 GGLDLIFPHHENEIAQSCCADRI-------EKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           GG+D    HH NEIAQ+                A IW+HN FL     KMSKS+G F+ +
Sbjct: 240 GGIDHREIHHPNEIAQNQAYCGCGGLDDAAHSGAKIWMHNNFLVERSGKMSKSSGEFLRL 299

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
             L++      + +     R+  L  HYR  ++F+ + L  A   L +          ++
Sbjct: 300 QLLID------KGYHPLAYRMMCLQAHYRSELEFSWEGLGAALTRLKRMVMAVQPLREVE 353

Query: 349 PA-------------VLSALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHILGI 394
            A                A+ +DLNT  A+ AL   LA +         +      +LG+
Sbjct: 354 SAATDHPKFAPALAKFQDAMADDLNTAIALTALEDALATKKVDAGIKRAVVERMDAVLGL 413

Query: 395 EVCKEHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            +                     IE  ++ R      K F+++D IR +L +KG  + D 
Sbjct: 414 GLLDLARTDLRLRPKDAIITEAEIEDALERRKAARAEKDFATSDAIRDELAAKGVEVMDG 473

Query: 446 KNPDNGQRMTRWK 458
            +P   +    WK
Sbjct: 474 -DPLGWE----WK 481


>gi|305432177|ref|ZP_07401341.1| cysteine--tRNA ligase [Campylobacter coli JV20]
 gi|304444720|gb|EFM37369.1| cysteine--tRNA ligase [Campylobacter coli JV20]
          Length = 457

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 147/485 (30%), Positives = 228/485 (47%), Gaps = 64/485 (13%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           +++ ++  E   +D  N+ +Y+CGPTVYD AH+G+AR  + FD+L R+L        V +
Sbjct: 2   DSVLKEKIE---LDQDNVNIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLSLGY--RVQF 56

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
            RN TDIDDKI+++            +++ +       + +D   L  L P  +PRAT +
Sbjct: 57  ARNYTDIDDKILKK------MSESGKSLNELVEFYIANYERDMKALNVLEPDFKPRATYY 110

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           I  M+ LI  +  +G  Y   + + FDTS   +Y S S R  +E    +R+  +  K+N 
Sbjct: 111 IEPMLDLIHKLSKNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENV--SRLSNEVEKRNE 168

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
           +DF+LWK     E  ++S +G+GRPGWH EC AM     G   DIH GG+DL+FPHHENE
Sbjct: 169 SDFVLWKF---DENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGVDLLFPHHENE 225

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
            AQ  CA      A IW+HNGF+ + G KMSKS  N   + + L       + +    +R
Sbjct: 226 AAQCRCA-CKRTLAKIWLHNGFVKINGEKMSKSLNNSFFLKDAL-------KDFMGEALR 277

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------------IDPAV 351
             +L +HYR   ++++  L   +  L K+ +      +                 I   +
Sbjct: 278 FYLLSSHYRAHFNYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHSNIAKQI 337

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEH 400
           L  L +DLN   A+  L +    +    D           +    +  A I G     E+
Sbjct: 338 LEVLSDDLNISKALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIFGFGFMDEN 397

Query: 401 L------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           L       K +   I+  + +R    K K F+ AD IR+ L   G  L+D        + 
Sbjct: 398 LYFQWGVAKELKEKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQDT------PQG 451

Query: 455 TRWKQ 459
           T W++
Sbjct: 452 TIWEK 456


>gi|283782829|ref|YP_003373583.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
 gi|283441414|gb|ADB13880.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
          Length = 588

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 150/542 (27%), Positives = 224/542 (41%), Gaps = 110/542 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +YNT       F       + MYVCG TV    HIG+ R  I FD++ R +     
Sbjct: 61  ENLHLYNTASHSTNTFVPKKHGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY 120

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A +   +               ++F K    L  LAPT +
Sbjct: 121 K--VTFVRNVTDIDDKIMKKANESGQNWW------ERAYIYEREFTKSYNTLGVLAPTVE 172

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT HI  M+ LI+ +I  GHAY            + FD  S  +YG  + +  ++ + 
Sbjct: 173 PRATGHITDMVELIERLIERGHAYVIKDNDGNPTGNVYFDVPSWEHYGELTHQNQNQNET 232

Query: 176 GTR--------------------------VPEKYHKKNPADFILWKRSTPME---PGWES 206
                                              K +P DF LWK     +     W++
Sbjct: 233 CADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWKT 292

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           P+G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A      AN+W+
Sbjct: 293 PFGEGRPGWHIECSAMSHRYLGNDFDIHGGGLDLRFPHHENEMAQTRAAGWES--ANVWM 350

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+ ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q 
Sbjct: 351 HSAWVTAKGEKMSKSLGNGLSVPVVLANN-------SAWVVRYALGAVQYRAMLEWSDQA 403

Query: 327 LTEAEILLSKWPQT------------------STSKGIIDPAVLSALYNDLNTVSAIQAL 368
           L E++    +                      S +   +      A+ +D+N   AI  +
Sbjct: 404 LVESKSAYDRIMNFLERADRLLDKKPTCEEVRSVNADELPEDFTRAMNDDINVSGAIAEI 463

Query: 369 HKLARESTKNHDLLP--------------------IFNASAHILGIEVCKEHLNKN---- 404
               R+     D                          A    LG++   +    N    
Sbjct: 464 FTTIRQGNTLIDDCSKDSSQAQSESIQKLIYLAVLQVRAMLDTLGLDPYAKTWASNNNQS 523

Query: 405 ---------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                          +   I   ++ R    K K F++AD IR  L + G ++ D     
Sbjct: 524 PAEGSNGKESKEHSALDSLITLQLKARADARKAKDFATADAIRDALNNAGIVIVDTSQGS 583

Query: 450 NG 451
           + 
Sbjct: 584 SW 585


>gi|269976318|ref|ZP_06183314.1| cysteinyl-tRNA synthetase [Mobiluncus mulieris 28-1]
 gi|269935647|gb|EEZ92185.1| cysteinyl-tRNA synthetase [Mobiluncus mulieris 28-1]
          Length = 538

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 168/546 (30%), Positives = 250/546 (45%), Gaps = 117/546 (21%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ + P  + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLTPGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK-----MGTR 178
           AT HIPQ I L+Q ++  GHAY +    + F   S+P+YGS + +++ +           
Sbjct: 113 ATGHIPQQIALVQRLLDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------ 343
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K+    ++            
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKFAGFVSAVQSAAGCAGMSN 343

Query: 344 ------------------KGIIDP-------------------AVLSALYN-----DL-- 359
                              G  DP                   A  + L +     D   
Sbjct: 344 SRGAIPDNAVNSSKPLMNPGEPDPVPPASAPLTDKYGDENPDLARQNELADVTLPEDFVA 403

Query: 360 ------NTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                 N   A+ ALH+  +         ++           A   +LG++        +
Sbjct: 404 ALDDDLNVPGALPALHRAVKTGHSALASGDTAAAAAQALQLRAMLDVLGLDPADSAWGAS 463

Query: 405 ISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            S A                    +  L+++R    + + ++ AD +R  LE+ G  + D
Sbjct: 464 DSGASAGAGSKNRKDPSADCLKSLVAALLEQRGAAKQSRDWARADALRDLLEASGLQITD 523

Query: 445 YKNPDN 450
                 
Sbjct: 524 TPAGAT 529


>gi|294055072|ref|YP_003548730.1| cysteinyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293614405|gb|ADE54560.1| cysteinyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 478

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 160/487 (32%), Positives = 245/487 (50%), Gaps = 56/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R +          +R Y CGPTVY  AHIGN R  ++ D L R+L     
Sbjct: 1   MSVQLYDTHSRSLQTLAPEGDQPLRFYCCGPTVYGPAHIGNFRTFLIQDTLRRVLEV--D 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +VRNITD+DDK I R+++E        ++   T+K T++F  D   L  L+P+ +
Sbjct: 59  NTPVKHVRNITDVDDKTIRRSQEE------GMSLGSFTAKWTEKFHADCEALNMLSPSIE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
           P A  HIPQ I L++ ++  GHAY   +  + F  SS  NYGS S+ K  E +       
Sbjct: 113 PSAVEHIPQQIALVEKLVEKGHAYATDDGSVYFRVSSFANYGSLSKLKQRELQTQNENSA 172

Query: 179 ----VPEKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVF 231
                 ++Y +++  DF LWK   P   +  W SPWG GRPGWH+ECSAM      G+  
Sbjct: 173 GEVNDADEYDRESVTDFALWKGRKPEDGDNYWSSPWGEGRPGWHLECSAMVDSAFDGETI 232

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           ++HGGG+DL FPHHENEIAQS CA         W H+  L +EG KMSKS GN  T+++L
Sbjct: 233 ELHGGGIDLCFPHHENEIAQSECAHG-HAFCKHWFHSAHLMVEGAKMSKSLGNLYTLDDL 291

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL---LSKWPQTSTSKGIID 348
            E      + +   V+R  ++   YR+ ++FT   L  +E     L ++ ++  +K   +
Sbjct: 292 RE------KGFNPMVVRYTLIAGSYRQQLNFTFDGLHASESAILKLERFAESLLAKTGEE 345

Query: 349 PAVLS-------------------ALYNDLNTVSAIQALHKLAR-------ESTKNHDLL 382
              L+                   AL N+LNT + + A+  +         +++   +LL
Sbjct: 346 TTALADYISKEAPADFGRFGKAWDALRNNLNTAACLGAIFGVIGSNPAATLDASGARELL 405

Query: 383 PIFNASAHILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             + +  + LG+     E    +    I  L Q+R    K K +  AD +R QL ++G+I
Sbjct: 406 KAYGSLLYALGLNLFTAEEKQVDAPAEIVALAQQRWEAKKAKDWGKADELRDQLLTQGWI 465

Query: 442 LEDYKNP 448
           ++D K+ 
Sbjct: 466 VKDSKDG 472


>gi|213865169|ref|ZP_03387288.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 283

 Score =  435 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 138/290 (47%), Positives = 186/290 (64%), Gaps = 10/290 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV    
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVD 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG DL+FP
Sbjct: 174 VKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           HHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L+
Sbjct: 234 HHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLK 282


>gi|332186293|ref|ZP_08388038.1| cysteinyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332013661|gb|EGI55721.1| cysteinyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 485

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 166/485 (34%), Positives = 244/485 (50%), Gaps = 46/485 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +YN+L R +  FQ IDP+N+R+Y CGPTVY++AHIGN R  +  D L R+LR+    
Sbjct: 11  PLTLYNSLTRALETFQPIDPANVRVYSCGPTVYNYAHIGNLRAYVFTDTLSRVLRWKG-- 68

Query: 64  KCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             +T++ NITD+     +      + E  +      I  I +  T  F ++   L   AP
Sbjct: 69  WPLTHIINITDVGHLTSDADAGDDKMEAAAKKSGQDIWSIAAHYTTAFKQNLKDLGIAAP 128

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T  P AT H+PQMI   + I    H Y   + + FD +++P+YG  +R + DE +  +R+
Sbjct: 129 TRFPLATEHVPQMIEFAKAIEAK-HCYRLPDGLYFDVTTVPDYGRLARHQDDEGE--SRI 185

Query: 180 PEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K++PADF +W+ S P E     W+SPWG G PGWH+ECS MS  YLG+ FDIH G
Sbjct: 186 DPVAGKRHPADFAIWRSSAPGENRQMEWDSPWGPGAPGWHLECSVMSKQYLGEQFDIHTG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           G+D    HH NEIAQ+        T ANIW+HN FL     KMSKS+G F+T+  L++  
Sbjct: 246 GIDHREIHHPNEIAQNQAHGCTANTGANIWMHNNFLVDRTGKMSKSSGEFLTLQALMD-- 303

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGI 346
               R +     RL  L  HYR  ++F    L  A++ L +  QT         + SKG 
Sbjct: 304 ----RGFHPLAYRLMCLQAHYRSEMEFGWDGLAAAQVRLKRLVQTVEGLRSRADAASKGD 359

Query: 347 IDP---AVLSALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASAHILGIEVCKE 399
             P    + +AL +DL T  A+  L ++  +  ++ D+    L  F+A+  +    + + 
Sbjct: 360 ATPYRERLDAALSDDLATPRALPVLDEMLGDKKQSSDVRLAALADFDATLGLQLTTLTRA 419

Query: 400 HLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            L             IE  + ER      K F+ +D IR  L + G  + D  +P     
Sbjct: 420 DLRTRPKTATVDEATIEAQLAERRAARAEKDFAKSDMIRDSLLAAGVEVMDG-DPLGWD- 477

Query: 454 MTRWK 458
              WK
Sbjct: 478 ---WK 479


>gi|302344681|ref|YP_003809210.1| cysteine synthase [Desulfarculus baarsii DSM 2075]
 gi|301641294|gb|ADK86616.1| cysteine synthase [Desulfarculus baarsii DSM 2075]
          Length = 775

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 142/494 (28%), Positives = 225/494 (45%), Gaps = 59/494 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + + +K +NTL R+I E + + P  + +Y CGP++     +G  R MI  D+L R L   
Sbjct: 305 VPEPLKFFNTLTRRIDELRPVRPGRVGIYACGPSLDGPPDLGLCRRMIFADLLRRYLELR 364

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V  V NI DIDD+ + +   E   +         T++  + F +D   L  L  +
Sbjct: 365 GFE--VKLVVNIADIDDRTVNQCLAEGAEL------KEFTARWEKAFHEDMAALNVLPAS 416

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             P+A+ HIP+MI   + ++    AYE    + F+ S  PNYG  S   ++  + G  V 
Sbjct: 417 DYPKASEHIPEMIEETRKLLAKDLAYEKLRSVYFNISRYPNYGQLSHVDLNAIQKGKTVD 476

Query: 181 -EKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
            + Y K+NP+DF L+KR++  E      W +PWG  RPGWH+EC+ MS+ +LG+ FDIH 
Sbjct: 477 FDYYEKENPSDFTLFKRASLQELKAGVYWPTPWGNCRPGWHVECACMSAGHLGQPFDIHL 536

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
              DLIFPH +NEIA +      +  AN+W+H+  + ++G+K ++  GN +++ ELLE  
Sbjct: 537 ASSDLIFPHGDNEIAIAESLYG-KPLANLWLHSEVVVVDGKKANRVQGNDVSLRELLE-- 593

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
               +      +R  ML  HYR  + F  ++L  AE  + +          + PA     
Sbjct: 594 ----QGHSPQAVRYWMLSQHYRRALRFAPEQLDLAERTVRRLNDFVARLRFLTPAPDDAQ 649

Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF 385
                            A+ NDL    A   +    +   +              +L   
Sbjct: 650 AEDVDQLIYETRYRFQEAMDNDLGVAKAQGHIFAFIKAINRLAAGEGLTMAQIQKVLEFM 709

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                +LG+         +   AIE+LVQ+R        F+ AD +R+QL   G  + D 
Sbjct: 710 QRLDSVLGVMNFD---GSSWDPAIEELVQKREQARADGDFALADRLREQLAEMGVQVADT 766

Query: 446 KNPDNGQRMTRWKQ 459
                     RW +
Sbjct: 767 ------PSGARWHR 774


>gi|15228880|ref|NP_191189.1| tRNA synthetase class I (C) family protein [Arabidopsis thaliana]
 gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
 gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 489

 Score =  435 bits (1118), Expect = e-119,   Method: Composition-based stats.
 Identities = 157/485 (32%), Positives = 240/485 (49%), Gaps = 66/485 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +YNT+ +    ++ ++P  I +YVCG T YD++HIG+AR  + FD+LYR LR+  
Sbjct: 8   KPDLTLYNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLG 67

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  VTYVRN TD+DD    +A+         +    ++++  ++++ D   L CL PTH
Sbjct: 68  YQ--VTYVRNFTDVDD----KAKNC------GEKPLDLSNRFCEEYLLDMAALQCLLPTH 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           QPR ++H+ Q+I +I+ II +G  Y    ++ F     P+YG  S +++D  + G RV  
Sbjct: 116 QPRVSDHMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAV 175

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K+NPADF L K +   EP WESPWG GRPGWHIE            FDIHGGG DL 
Sbjct: 176 DSRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIE------------FDIHGGGADLK 223

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQ+C A   +   N W+HNG +     KM KS  NF TI ++         +
Sbjct: 224 FPHHENEIAQTCAA-CEDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQI-------AAN 275

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------PQTSTSKGIID 348
           +    +R  ++   YR P++++V +L  +   L                 Q S     + 
Sbjct: 276 YHPLALRHFLMSAQYRSPLNYSVSQLESSSDALYSLSPYREEMSGDVGKTQQSAEAKEMI 335

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNH-----DLLPIFNASAHILGI-------EV 396
             V +AL   +N    I  L K+ ++   +      ++         +LG+       E+
Sbjct: 336 KKVKNALK-FINVS--ISKLKKMQKKQRMSLVVSLVEVEKAVREVLDVLGLLTTLSYGEL 392

Query: 397 CKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            K+   K +         + + ++ER +  K K F  +D IR+ L  KG  LED      
Sbjct: 393 LKDMKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIRELLAFKGIFLEDVPGDTV 452

Query: 451 GQRMT 455
            +  T
Sbjct: 453 WRPST 457


>gi|290558858|gb|EFD92250.1| cysteinyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 467

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 157/479 (32%), Positives = 235/479 (49%), Gaps = 56/479 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++NTL +K  +F  ID   + MY CGPTVY++ HIGN R  I +D+L R         
Sbjct: 1   MELFNTLSKKKEKFNPIDGKTVSMYTCGPTVYNYVHIGNLRTFIFYDILKRAFELEGY-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+DDK I+ +++         ++   T+  T  F++D  RL        P+
Sbjct: 59  TVQHVMNLTDVDDKTIKGSQE------TGTSLEDYTTVYTNYFMEDLKRLNIKDNIKFPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I +M  +I  ++  G+AYEA++ I +D S   +YG  S   ++  K      + Y 
Sbjct: 113 ATENIDEMQSIINELLKKGYAYEADDGIYYDVSKFNDYGKLSGMTVN-GKYSRIKNDDYD 171

Query: 185 KKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           K+N ADF LWK  T    +  WE    +GRPGWHIECSAMS  YLGK  D+H G +DLIF
Sbjct: 172 KENAADFALWKYWTENDGKVYWEGKLKKGRPGWHIECSAMSLKYLGKTIDVHCGAVDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS      +   N W+H   L + G+KMSKS GNF T+N+L++      + +
Sbjct: 232 PHHENEIAQSEAYTGQK-FVNYWVHAEHLLVNGQKMSKSLGNFYTLNDLVQ------QGF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQR----------LTEAEILLS------------KWPQT 340
                RL +L +HYR  +DFT             +  +   L             +  Q 
Sbjct: 285 NPLSFRLMVLDSHYRNRLDFTFDSLKKYEKLLKKIDLSIKSLEKTEKYEGNNNNARVQQI 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNASA 389
                 +     +A+ NDL+T SA+ A   L             ++ +   L    +   
Sbjct: 345 QDQVNKLLENFKAAVNNDLDTHSALVAFFSLLDLCDSTAEKGSIDNLEYKLLKDAVDKMN 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             LG+ V  E     I   +E+L ++R    K K F  AD +R+++  KG+ + D    
Sbjct: 405 GFLGVYVEYE-----IPKDVEELAEKREEFRKQKNFVEADELRERINGKGYYIADLPRG 458


>gi|306836885|ref|ZP_07469840.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567226|gb|EFM42836.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 374

 Score =  433 bits (1115), Expect = e-119,   Method: Composition-based stats.
 Identities = 142/392 (36%), Positives = 207/392 (52%), Gaps = 35/392 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++I++T  R   +F+ I P +  +Y+CG T     HIG+ R  + FD+L R L     
Sbjct: 2   NTLRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  VRN+TDIDDKI+ +A +       N       S   ++F K    L  L P+ +
Sbjct: 62  D--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNLLGVLPPSVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE------ANNEIIFDTSSI-----PNYGSFSRRKID 171
           PRAT  + QM+  +Q +I  G AY       A   + FD  +       +YG+ S  +++
Sbjct: 114 PRATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDVEAWTKAEGSDYGALSGNRVE 173

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           E + G    +   K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG  F
Sbjct: 174 EMEQGES--DNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGSNF 231

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GGLDL FPHHENEIAQS  A   +K AN W+HN ++ + G KMSKS GN ++I+ +
Sbjct: 232 DIHCGGLDLQFPHHENEIAQSHAA--GDKFANYWMHNHWVTMAGEKMSKSLGNVLSISNM 289

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGI 346
           LE  +          +R  +   HYR  ++++   LTEA     +            +G 
Sbjct: 290 LELVR-------PVELRYYLGSAHYRSVLEYSESALTEAAAGYRRIEGFVKRFAGVERGD 342

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
             P    A+ +D+    A+ A+H   R   K+
Sbjct: 343 WTPDFEDAMNDDIAVPKALAAIHTTVRAGNKD 374


>gi|298253308|ref|ZP_06977100.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
 gi|297532703|gb|EFH71589.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
          Length = 588

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 150/542 (27%), Positives = 224/542 (41%), Gaps = 110/542 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + +YNT       F       + MYVCG TV    HIG+ R  I FD++ R +     
Sbjct: 61  ENLHLYNTASHSTNTFVPKKHGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY 120

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VT+VRN+TDIDDKI+++A +   +               ++F K    L  LAPT +
Sbjct: 121 K--VTFVRNVTDIDDKIMKKANESGQNWW------ERAYIYEREFTKSYNTLGVLAPTVE 172

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRKIDEQKM 175
           PRAT HI  M+ LI+ +I  GHAY            + FD  S  +YG  + +  ++ + 
Sbjct: 173 PRATGHITDMVELIERLIERGHAYVIKDNDGNPTGNVYFDVPSWEHYGELTHQNQNQNET 232

Query: 176 GTR--------------------------VPEKYHKKNPADFILWKRSTPME---PGWES 206
                                              K +P DF LWK     +     W++
Sbjct: 233 CADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWKT 292

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           P+G GRPGWHIECSAMS  YLG  FDIHGGGLDL FPHHENE+AQ+  A      AN+W+
Sbjct: 293 PFGEGRPGWHIECSAMSHRYLGNDFDIHGGGLDLRFPHHENEMAQTRAAGWES--ANVWM 350

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H+ ++  +G KMSKS GN +++  +L           A V+R A+    YR  ++++ Q 
Sbjct: 351 HSAWVTAKGEKMSKSLGNGLSVPVVLANN-------SAWVVRYALGAVQYRAMLEWSDQA 403

Query: 327 LTEAEILLSKWPQT------------------STSKGIIDPAVLSALYNDLNTVSAIQAL 368
           L E++    +                      S +   +      A+ +D+N   AI  +
Sbjct: 404 LVESKSAYDRIMNFLERADRLLDKKPTCEEVRSVNADELPEDFTRAMNDDINVSGAIAEI 463

Query: 369 HKLARESTKNHDLLP--------------------IFNASAHILGIEVCKEHLNKN---- 404
               R+     D                          A    LG++   +    N    
Sbjct: 464 FTTIRQGNTLIDDCSKDSSQAQSESVQKLIYLAVLQVRAMLDTLGLDPYAQTWASNDNQS 523

Query: 405 ---------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
                          +   I   ++ R    K K F++AD IR  L + G ++ D     
Sbjct: 524 PAEGSNGKENKEHSALDSLITLQLKARADARKAKDFATADAIRDALNNAGIVIVDTSQES 583

Query: 450 NG 451
           + 
Sbjct: 584 SW 585


>gi|55378085|ref|YP_135935.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68052897|sp|Q5V2M3|SYC_HALMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55230810|gb|AAV46229.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 492

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 145/506 (28%), Positives = 231/506 (45%), Gaps = 75/506 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL  +   F+  DP ++ +Y CG T  D  H+G+AR  +  DV+ R L Y   
Sbjct: 1   MTLRVTNTLTGEKEPFEPRDPDSVLLYYCGLTTSDPPHLGHARGWVHVDVMARWLDYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N+TD+++KI+ R  ++       D+ + +     QQ + D   L        
Sbjct: 61  D--VHHVENLTDVNEKIVARVGED------GDSEADVARHYVQQAIDDMRSLNLGRAEVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P++I L++ +I  GHAYE N  + FD +S  +YG  S + +D+ +       +
Sbjct: 113 PRVSEHVPEIIDLVERLIEQGHAYEQNGSVYFDVTSFEDYGKLSNQSVDDIESQG-ADTE 171

Query: 183 YHKKNPADFILWKR---------------STPMEPG------WESPWGRGRPGWHIECSA 221
             K++PADF LWK                + P E        W+SPWG GRPGWHIECSA
Sbjct: 172 GEKRHPADFALWKAGGVDPADIAEHQHPEAAPAEEACQTAQIWDSPWGEGRPGWHIECSA 231

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS  +L +  DIH GG DL+FPHHENE+AQS  A   ++ AN W+H   L  E  KMS S
Sbjct: 232 MSMTHLDESIDIHVGGQDLVFPHHENEVAQSEAATG-KQFANYWLHVRLLETEEEKMSSS 290

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---- 337
            GN+ T+ + +E        +   V+R  +L T Y     ++ + + EA+    +     
Sbjct: 291 LGNYFTVADAVE-------EFGPDVLRTFLLSTAYTSRATYSDETIAEAKERWDRLSRGY 343

Query: 338 PQTSTSKGIIDP------------------AVLSALYNDLNTVSAIQALHKLARESTKNH 379
            +   +   +D                   A  +AL +D NT  A+ AL  L      + 
Sbjct: 344 ERAVEACDDVDAHTKVTDETLRDAVEDARSAFEAALNDDFNTREAMTALLDLTAAVNTHV 403

Query: 380 D------------LLPIFNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKK 424
           D             +  F      ILG+    +           ++ ++  R    +   
Sbjct: 404 DGHDEYDYQGLRRAVETFEEFGGGILGLAFGDDDSGDVSLAGDVVDLVLTVRQQEREAGN 463

Query: 425 FSSADYIRKQLESKGFILEDYKNPDN 450
           +  AD +R +LE+ G  ++D  +   
Sbjct: 464 YERADELRDELEALGVEVQDTDDGPT 489


>gi|169350895|ref|ZP_02867833.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
 gi|169292481|gb|EDS74614.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
          Length = 460

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 158/470 (33%), Positives = 235/470 (50%), Gaps = 52/470 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ ++++NTL  K  EF+ +    + +YVCGPTVY++ HIGN RPMIVFDVL R   Y  
Sbjct: 13  EEIMRLFNTLTNKKEEFKPLRDGEVSIYVCGPTVYNYVHIGNTRPMIVFDVLRRTFEYLG 72

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V +V N TD+DDKII+ A+QE        +   +T K  + +      L  L PT+
Sbjct: 73  YK--VIFVSNFTDVDDKIIKAAKQE------GISEKELTDKYIKAYEDVRRDLNLLFPTY 124

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--RV 179
            PR TN +  +I  I +++  G+AYE + ++ F  S I  YG  S  KI++   G   RV
Sbjct: 125 APRVTNTMEAIISFIDDLVKTGYAYEVDGDVYFRVSKIEEYGQLSGIKIEDLVAGASERV 184

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGL 238
            E   K+   DF LWK++      ++SPW +GRPGWH EC  M +        DIHGGG 
Sbjct: 185 DENNKKEESTDFALWKKTDEG-IRFDSPWSKGRPGWHTECVVMINDIFQDGKIDIHGGGQ 243

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQS         A+ W+HN  +N++ +KMSKS GN I   +++      
Sbjct: 244 DLKFPHHENEIAQSMACHH-HPIAHTWMHNQMINIDNQKMSKSLGNVIWAKDMINDLG-- 300

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
                  V +  ML +HYR P++ T   L   +  ++K      +               
Sbjct: 301 -----CNVYKWFMLSSHYRNPLNLTDAVLNNVKKEVAKVDNVVKTVSLYLQVNGLDGNEY 355

Query: 344 -KGIIDPAVLSALYNDLNTVSAI-------QALHKLARESTKNHDLL----PIFNASAHI 391
            K  +D  V  AL +DLNT  A+       + L++L R   K+ + +            +
Sbjct: 356 CKETVDVMV-DALEDDLNTSLALTQILNQVKVLNQLMRVKEKDDESILMNYNTLMKMVTV 414

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +G       L+ +      +L ++ L   ++K F  AD +R +L SKG I
Sbjct: 415 IGFVYQPHQLSLDE----LELYKKWLEAKEVKNFDVADKLRSELISKGII 460


>gi|227876791|ref|ZP_03994900.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
 gi|227842688|gb|EEJ52888.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
          Length = 538

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 168/546 (30%), Positives = 249/546 (45%), Gaps = 117/546 (21%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ ++   + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLNTGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGLPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK-----MGTR 178
           AT HIPQ I L+Q ++  GHAY +    + F   S+P+YGS + +++ +           
Sbjct: 113 ATGHIPQQIALVQRLLDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------ 343
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K+    ++            
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKFAGFVSAVQSAAGCAGMSN 343

Query: 344 ------------------KGIIDP-------------------AVLSALYN-----DL-- 359
                              G  DP                   A  S L +     D   
Sbjct: 344 SRGAIPDNAVNSSKPLMNPGEPDPVPPASAPLTDKYGDENPDLARQSELADVTLPEDFVA 403

Query: 360 ------NTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                 N   A+ ALH+  +         +            A   +LG++        +
Sbjct: 404 ALDDDLNVPGALPALHRAVKTGHSALASGDIAAAAAQALQLRAMLDVLGLDPADSAWGAS 463

Query: 405 ISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            S A                    +  L+++R    + + ++ AD +R  LE+ G  + D
Sbjct: 464 DSGASAGAGSKNRKDPSADCLKSLVAALLEQRGAAKQSRDWARADALRDLLEASGLQITD 523

Query: 445 YKNPDN 450
                 
Sbjct: 524 TPTGAT 529


>gi|269986687|gb|EEZ92967.1| cysteinyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 467

 Score =  433 bits (1113), Expect = e-119,   Method: Composition-based stats.
 Identities = 164/475 (34%), Positives = 239/475 (50%), Gaps = 56/475 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L RKI  F+A++   + MY CGPTVY++ HIGN R  I +D + R L+    + 
Sbjct: 1   MKVYNSLSRKIENFKALEQGKVTMYTCGPTVYNYVHIGNLRTFIFYDTVKRALKL--NDY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDK I+ A      I    ++   T      F++D  +L     T   +
Sbjct: 59  KVKHVMNITDVDDKTIKGA------IERRMSLKEYTELYANYFLEDLNKLNVDMDTKFTK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I +M  +I  ++  G+AYEA++ + F+ S   +YG  S  K+D         + Y 
Sbjct: 113 ATDNIDEMQKIIVKLVKEGYAYEADDGVYFNVSKFKDYGKLSGMKVD-GSYSRIKNDDYD 171

Query: 185 KKNPADFILWKR--STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           K+N +DF LWK   +   E  W+    +GRPGWHIECSAMS  YLGK  DIH G +DLIF
Sbjct: 172 KENASDFALWKYWDANDGEAYWKGELKKGRPGWHIECSAMSMKYLGKTIDIHCGAVDLIF 231

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENEIAQS    + +   N W+H   L + G+KMSKS  NF T+ +L       G+ +
Sbjct: 232 PHHENEIAQSESYSKQK-FVNYWLHAEHLLVNGQKMSKSLNNFYTLKDL------EGQGF 284

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------------------QT 340
                RL  + +HYR  +DF  + L + E LL+K                        QT
Sbjct: 285 NPLSFRLMAIDSHYRNKLDFNFENLRKYEKLLAKIDLSIKALNKVEKYEEKEDNYSRVQT 344

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQA---LHKLARESTKNHD--------LLPIFNASA 389
                 +      A+ NDLNT  A+Q    L  LA E TK           L    + + 
Sbjct: 345 KQKVEKVIELFKEAVNNDLNTHEALQHFLSLLDLADEKTKKGKIDNNEFSVLSTAISKAN 404

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            +LGI     +++  I   I  L +ER    + K+F  AD +R+++   G+ + D
Sbjct: 405 DVLGI-----YIDYKIPEEIIALAEEREQKRREKQFIEADLLREKISENGYSIAD 454


>gi|307701600|ref|ZP_07638617.1| cysteine--tRNA ligase [Mobiluncus mulieris FB024-16]
 gi|307613279|gb|EFN92531.1| cysteine--tRNA ligase [Mobiluncus mulieris FB024-16]
          Length = 538

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 169/546 (30%), Positives = 250/546 (45%), Gaps = 117/546 (21%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++    + EF+ ++   + +Y+CGPTV    H+G+ R  + FDVL R LR    E 
Sbjct: 1   MKLYDSATHAVREFKPLNTGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI++++R+      +      + +   ++F      L  + P   P 
Sbjct: 60  -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK-----MGTR 178
           AT HIPQ I L+Q +I  GHAY +    + F   S+P+YGS + +++ +           
Sbjct: 113 ATGHIPQQIALVQRLIDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W++PWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GGLDL FPHHENE AQS  A      A +W+HN +L L+G KMSKS GN + +  LL   
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------ 343
                 WPAPV+RLA++ THYR  ++F+   L +A  L  K+    ++            
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKFAGFVSAVQSAAGCAGMSD 343

Query: 344 ------------------KGIIDP-------------------AVLSALYN-----DL-- 359
                              G  DP                   A  S L +     D   
Sbjct: 344 SRGAIPDNAVNSSKPLMNPGEPDPVPPASAPLTDKYGDENPDLARQSELADVTLPEDFVA 403

Query: 360 ------NTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
                 N   A+ ALH+  +         ++           A   +LG++        +
Sbjct: 404 ALDDDLNVPGALPALHRAVKTGHSALASGDTAAAAAQALQLRAMLDVLGLDPADSAWGAS 463

Query: 405 ISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
            S A                    +  L+++R    + + ++ AD +R  LE+ G  + D
Sbjct: 464 DSGASAGAGSKNRKDPSVDCLKSLVAALLEQRGAAKQSRDWARADALRDLLEASGLQITD 523

Query: 445 YKNPDN 450
                 
Sbjct: 524 TPAGAT 529


>gi|323342428|ref|ZP_08082660.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463540|gb|EFY08734.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 445

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 149/465 (32%), Positives = 229/465 (49%), Gaps = 48/465 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+    + EF+ I+   + MYVCGPTVY++AHIGNARP++VFD+L R+L     + 
Sbjct: 1   MKLYNSKSNSLEEFKPIEEGKVSMYVCGPTVYNYAHIGNARPIVVFDLLRRVLETLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TD+DDKII++A +E          S+I+++  + + K    L        P+
Sbjct: 60  -VKLVSNYTDVDDKIIKKASEE------GVDESVISNRYIEAYEKVRKGLHADHVQATPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            TN +P++I  IQ++I H +AY +  ++ F  S    YG+ S + IDE  +G R+ E  +
Sbjct: 113 VTNTMPEIISFIQDLIDHDYAYASKGDVYFRVSKAEEYGAISSQNIDELMVGARIEENSN 172

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFP 243
           K+NP DF+LWK +      W++PWG+GRPGWH EC  M ++    ++ DIHGGG DL FP
Sbjct: 173 KENPLDFVLWKDTNDNGIKWDAPWGKGRPGWHTECVVMINNEFKQEIIDIHGGGQDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ C A      AN W+HN  LN++G KMSKS GN +   E ++          
Sbjct: 233 HHENESAQ-CRALHNHDLANYWVHNAMLNIDGEKMSKSIGNVMWAQEFIDKLGE------ 285

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------KGII 347
               R  ++ THYR  ++ T + + +    L +  Q                      + 
Sbjct: 286 -NATRWLLMSTHYRLTLNITEELVEQTHKELDRIFQGLNKAYIELEKLEFQIDTNYDELR 344

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEV 396
               + A+ +DLN  +A   L    ++                  +        +LGI  
Sbjct: 345 FNQFMDAMSDDLNVANANVVLFDTVKQLNAAVRQREINASDVSKYIVTVEKMLDVLGISY 404

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            +  L++        L ++       K F  AD  R +L  +G +
Sbjct: 405 TRIVLDEAA----RLLFKQWNEAKARKDFDDADRYRGELIERGLL 445


>gi|54302905|ref|YP_132898.1| cysteinyl-tRNA synthetase CysS [Photobacterium profundum SS9]
 gi|61216516|sp|Q6LHY2|SYC2_PHOPR RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|46916329|emb|CAG23098.1| hypothetical cysteinyl-tRNA synthetase (cysS) [Photobacterium
           profundum SS9]
          Length = 457

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 147/462 (31%), Positives = 222/462 (48%), Gaps = 25/462 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++ +++T+ R++  F +I  + + +Y CGPTVYD+AH GN R  +  DVL R L    
Sbjct: 3   QPELLLFDTMARELRPFNSIRANKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLEING 62

Query: 62  GEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            E  V +V NITD+   + +      + E  +   N +   I     Q F  D   L   
Sbjct: 63  YE--VNHVMNITDVGHLVSDADTGEDKMEKGARKQNKSAWEIAQFFEQAFFDDLKLLNIS 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+   RAT HI + I  IQ +   G  Y+ ++ + F+T  + +YG  +R      + G 
Sbjct: 121 TPSVTCRATEHIQEQIKFIQELETKGFTYQTSDGVYFNTDRLADYGKLARLDKQGLEAGI 180

Query: 178 RVPEKYHKKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           RV E   KK+P DF LWK S   P +  W+ PWG G PGWHIECSAM+  YLG VFDIH 
Sbjct: 181 RV-EMAEKKHPTDFALWKFSGDKPRQMEWQGPWGIGFPGWHIECSAMAEKYLGDVFDIHV 239

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ    +   + AN W+H  FL L+  K+SKS G  + ++ L+   
Sbjct: 240 GGEDHIPVHHTNEIAQCQAKNGHVQ-ANYWLHGYFLQLKKEKISKS-GTSLRLDALV--- 294

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPA-- 350
               + +     R   L +HYR  + FT + L+ A+  L +         S G +D +  
Sbjct: 295 ---AKGYEPMAYRYLTLTSHYRSHLSFTWEGLSGAQKALHRLRNKVAFLPSNGNVDESYR 351

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
              +  +  DLN   A+  +  +        +          ILG+++ K    + I   
Sbjct: 352 ELFMRHINRDLNMPQALALVWDVLNSELLPENKRATALFFDRILGLDIHKIETVE-IPEH 410

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           I +LV+ R  + +   F  AD IR Q+   G+ + D  +   
Sbjct: 411 ISRLVELRTQVKRQGNFKKADAIRNQIHDLGYQVNDSGDGST 452


>gi|292655283|ref|YP_003535180.1| cysteinyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291370540|gb|ADE02767.1| cysteinyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 494

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 152/505 (30%), Positives = 230/505 (45%), Gaps = 72/505 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + NTL  +  EF++     + +YVCG TV D AH+G+AR  +  D+++R L Y   
Sbjct: 1   MTLSVTNTLTGEREEFES-HGDEVLLYVCGLTVSDHAHLGHARLWMHADLMHRWLDYEGY 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+++KI  R         + D  + +        ++D   L        
Sbjct: 60  D--VRHVENFTDVNEKIAAR----IGEDDLGDDEAGVAEHFVGDVIRDMRGLNLKRAEVY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP++I L+Q ++  GHAYE+N  + FD S+  +YG  S +K++E +      E+
Sbjct: 114 PRVSEHIPEIIDLVQTLVDRGHAYESNGSVYFDVSTFDDYGKLSNQKLEELESRATKDER 173

Query: 183 YHKKNPADFILWKR------------STPMEP-------GWESPWGRGRPGWHIECSAMS 223
             K+NP DF LWK                +EP        WESPWG GRPGWHIECSAMS
Sbjct: 174 SEKRNPTDFALWKAGAVDPKTAAEHRDPDLEPLHAPCGETWESPWGEGRPGWHIECSAMS 233

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             +LG   DIH GG DL+FPHHENEIAQS  A   ++ A  W+H G L  EG KMS S G
Sbjct: 234 MTHLGDTLDIHVGGRDLVFPHHENEIAQSEAATG-QQFARYWLHVGLLQTEGDKMSSSLG 292

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-ST 342
           NF T+ + L+        + A VIR   L T Y     ++ + + EAE    +  +    
Sbjct: 293 NFFTVGDALD-------EFGADVIRTFYLSTAYGSEQTYSAETIAEAEERWERLERAYEA 345

Query: 343 SKGIID---------------------PAVLSALYNDLNTVSAIQALHKLARESTK---- 377
           +   +D                          A+ +D N   A+  L  LA    +    
Sbjct: 346 AVDAVDSPDARTKVEATDLRDTVTETRENFREAMNDDFNVREAMAELLGLAGAVNRHVAD 405

Query: 378 --NHDLLPIFNAS-------AHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKF 425
              +D   +  A          + G+         ++S+A   ++ ++  R    +   +
Sbjct: 406 ADEYDYRALRRAVEAFEDLGGEVFGLSFGDAGEGGDVSVAEDLVQLVLDVREAEREAGNY 465

Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
             AD +R  L + G  +ED  +   
Sbjct: 466 ERADDLRDDLTALGVDVEDGPDGAT 490


>gi|149920369|ref|ZP_01908839.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149818811|gb|EDM78253.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 537

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 155/540 (28%), Positives = 219/540 (40%), Gaps = 108/540 (20%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  ++   F +  P  +R+Y CG TVY   HIG+AR    +DV  R L Y     
Sbjct: 16  LHVYNTRTKRKEAFVSAQPRVVRIYTCGLTVYSDMHIGHARTYCFWDVFRRWLEYRGY-- 73

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  V N TDIDD+II+ AR++       +    +  +    F +D   L         R
Sbjct: 74  HVISVINYTDIDDRIIKDAREK------GEGTLDLAERVVASFRRDCRALKIKDYAVYTR 127

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVP 180
           AT+ + + I  ++ ++  GHAY    E+++D  S   YG  S R ++  + G        
Sbjct: 128 ATDFVEEQIAAVKALVDKGHAYVVEGEVLYDVRSFERYGQLSGRSLEGMQEGASGRTDSA 187

Query: 181 EKYHKKNPADFILWKRSTPMEPGW---ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           E   K+  ADF LWK S   EP W   E+ W  GRPGWHIECSAMS+  LGK FD+HGGG
Sbjct: 188 ETSRKRFFADFTLWKPSKEGEPCWQTGEAEWPSGRPGWHIECSAMSTTTLGKNFDVHGGG 247

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-----KMSKSNGNFITINELL 292
           +D +FPHHENE+AQS          N W+H   L L        KMSKS GN I+I +L+
Sbjct: 248 IDNLFPHHENEVAQSEPLCG-HPWVNYWMHPAHLQLLNEEGQPIKMSKSLGNVISIGDLV 306

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIID 348
                          R    +THYR  + F  Q L EA     K  +     +     +D
Sbjct: 307 AKHG-------PDAARWYFGVTHYRSSLAFNWQLLDEATKGFDKVRRAVKMIADRLAEVD 359

Query: 349 PA------------------------------------------VLSALYNDLNTVSAIQ 366
            A                                           ++A+ +D+ T  A  
Sbjct: 360 DAELRVPTVGTYAGLREGDAAVPRERQSFGHGALGEINARFMDRFIAAMDDDMGTPKATA 419

Query: 367 ALHKLARESTKN-------------HDLLPIFNASAHILGIEVCKEHL------------ 401
           A+     E                             +LG+E   E L            
Sbjct: 420 AVFDYVNELFAAGIETNEALDAASLLAAYRCLTRHLWVLGVEFPDERLFPELAADCFAVA 479

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                  + ++ A++K++  R    K + F+ AD IR  L   G  +ED      G R T
Sbjct: 480 SGDSAREEALAGAVDKMLLLRQQARKDRDFAKADLIRDLLTEAGVSVEDTP---KGPRWT 536


>gi|218781656|ref|YP_002432974.1| cysteine synthase [Desulfatibacillum alkenivorans AK-01]
 gi|218763040|gb|ACL05506.1| cysteine synthase [Desulfatibacillum alkenivorans AK-01]
          Length = 756

 Score =  430 bits (1105), Expect = e-118,   Method: Composition-based stats.
 Identities = 134/477 (28%), Positives = 216/477 (45%), Gaps = 53/477 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +YNT  R    F  I P    MY CGPT  +   +G+ R  +  D+L R L Y  
Sbjct: 299 KSGLSLYNTAIRSKESFTPIKPGKAGMYSCGPTANEPMGLGHCRRFVFADLLSRYLTYKG 358

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++ NITD+DDK IE +++          +   T K   QF++D   L       
Sbjct: 359 LD--VKHIINITDMDDKTIEGSQE------AGMGLEEFTQKYIDQFMEDIETLGVKPAEA 410

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PRA+ H+  M+ +   +   G AYE    + FD S +  YG  S   +D+ ++G  V  
Sbjct: 411 YPRASKHVDDMVEIASKLAGTGFAYEKMRSLYFDISRLEGYGDLSGIDLDKIRLGATVEL 470

Query: 181 EKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           + Y K NP DF L+KRS   E       ++ WG  RP WHI+C+AMS  YLG+ +DIH  
Sbjct: 471 DDYEKDNPRDFTLFKRSRLNELKRGIFVKTEWGNVRPSWHIQCTAMSMKYLGETYDIHTA 530

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
             DL+FPHHENE+A +      +  AN W+H   + ++ +         IT+ +L +   
Sbjct: 531 SRDLVFPHHENEVAIAKALTG-KPLANYWLHCDQVIVDEKDAWPEK---ITLQDLKD--- 583

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------ 350
              + +    IR  +L THYR+P+  T+  L  A   L +      +    D A      
Sbjct: 584 ---KGYTGRQIRFWLLATHYRKPLHLTLASLDSAAKGLERLDHFVEALQNADGARTNADV 640

Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASA 389
                      ++A+ +DL+  +A+ +L  + ++  +            + +L     + 
Sbjct: 641 DQLLYDIKQGFIAAMDDDLSVSAALSSLFAVVKKVNRLASQNALGSSGANKILEALRKTD 700

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +LG+              I  L+++R        +++AD IR QL ++G  + D K
Sbjct: 701 QVLGVLSFDAEPQ---DAEISALMEKREKARAEGDYAAADAIRDQLTARGVTVRDGK 754


>gi|237750277|ref|ZP_04580757.1| cysteinyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229374171|gb|EEO24562.1| cysteinyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 499

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 150/520 (28%), Positives = 234/520 (45%), Gaps = 87/520 (16%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++  R   +   ++ + IRMY+CGPTVYD AH+G+AR  I FD+L R L     + 
Sbjct: 1   MKVYDSKHRDKIDLVPLNSNEIRMYICGPTVYDDAHLGHARSAISFDLLARFLETKGYK- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V   +N TDIDDK+I ++ Q    +        +      ++++D   L       +PR
Sbjct: 60  -VIVAKNFTDIDDKLINKSFQTKTPLN------ELAKHYIDKYLQDMEPLNVRRAHFEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT  +  M   I++++    AY   N +I  + S   +YG+ SR  +D+     RV  + 
Sbjct: 113 ATEFLESMSNFIESLLQKDIAYRLPNGDICLEVSKDKSYGTLSRH-LDDTDSVHRVEVEE 171

Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFDIHGGG 237
            K++  DF+LWK      + G+ES  G+GRPGWHIECSAM    L         DIH GG
Sbjct: 172 GKRDQRDFVLWKAYKGENDIGYESILGKGRPGWHIECSAMIDSVLAYKDKEFCIDIHAGG 231

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHENE +Q+ C    E  A  W+HNGF+ + G KMSKS GN   I + L     
Sbjct: 232 QDLFFPHHENEASQTRCLHNKE-LAKYWLHNGFVTINGEKMSKSLGNSFFIKDAL----- 285

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------- 342
             + +   ++R  ++ THYR P+ F  + L +++  L K  +                  
Sbjct: 286 --KVYHGEILRNYLIGTHYRSPLHFNEEDLLQSKKRLDKIYRLKKRLDYEKDSIPKFLPF 343

Query: 343 --------------------------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
                                     +        L +L +DLN   A+  + +  +E+ 
Sbjct: 344 SNDTDSIKANEWEEFFKPYMSEILKQATKDFSEKFLESLSDDLNISLALSVIEEFIKEAN 403

Query: 377 KNHD-----------LLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLIL 419
           ++ D                     +LG+      E  +  ++    + IE L++ERL  
Sbjct: 404 EHLDTQPKDKAYKAQAKANLALIDFVLGLGTLSYSEYFQLGVSDEEKLKIETLIKERLEA 463

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +K F  AD IR  LE+ G  + D       +  T W++
Sbjct: 464 KAVKDFVKADSIRNTLENMGISIMD-----KSKEHTEWEK 498


>gi|300708706|ref|XP_002996527.1| hypothetical protein NCER_100366 [Nosema ceranae BRL01]
 gi|239605836|gb|EEQ82856.1| hypothetical protein NCER_100366 [Nosema ceranae BRL01]
          Length = 467

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 153/481 (31%), Positives = 237/481 (49%), Gaps = 62/481 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L +K+  F  IDP+N+++Y+CGPTVYD +HIG+AR  + FDV+  +L  Y+   
Sbjct: 2   LKIYNSLTKKLEIFNPIDPNNVKIYICGPTVYDHSHIGHARTYVSFDVIRNILEKYFNYN 61

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+V NITDIDDKII ++++         ++  IT K T  F++D   L    PT   +
Sbjct: 62  -VTFVMNITDIDDKIINKSKE------TGMSMKDITVKYTNLFLEDMALLNVRKPTVLTK 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T ++ ++   ++ +  +G+AYE+N  + FD         +   + +        P    
Sbjct: 115 VTEYVDKIKEYVKILENNGYAYESNGSVYFDVMEYKKKFKYPIFREETVNNLGDSPNIQD 174

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK+P DF LWK+        ++ +G GRPGWHIECS M++  LG   DIH GG+DL FPH
Sbjct: 175 KKSPLDFALWKK--------DNLFGSGRPGWHIECSVMANDVLGDYIDIHAGGVDLKFPH 226

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ     + +   N ++H G LN+ G KMSKS  NF TI  +LE           
Sbjct: 227 HENEIAQCQARYQKKPWVNYFMHTGHLNINGLKMSKSLKNFTTIKSILERC-------TP 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------DPAVLS- 353
             +R+  L   + + +++  +++  A+ +  K          I          D  VL  
Sbjct: 280 IQLRILFLYHQWNKDMNYEEEQIKFAQNVEKKIFNFFMYVNSINNISKIYNKNDIEVLDL 339

Query: 354 ----------ALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGI 394
                     +  N+ +T S I+AL +L   +    DL+                 ILGI
Sbjct: 340 ISKTSKIVDVSFSNNFDTPSVIKALLELVSFTNSKLDLVSACTLYQVRDFVKRILDILGI 399

Query: 395 EVCKEHLNKNISIAIEKLV-----QERLILLK---MKK-FSSADYIRKQLESKGFILEDY 445
              +E +    S  + KL+     + R+ L K    K  ++  D +R  L+  G++LED 
Sbjct: 400 -NKEEKVRDEDSENLAKLINIFRNKIRMALKKGVNKKDLYNICDEVRDNLKDLGYVLEDS 458

Query: 446 K 446
           K
Sbjct: 459 K 459


>gi|76802853|ref|YP_330948.1| cysteine--tRNA ligase [Natronomonas pharaonis DSM 2160]
 gi|76558718|emb|CAI50311.1| cysteine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 497

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 143/504 (28%), Positives = 223/504 (44%), Gaps = 66/504 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ NTL  +  EF+  DP N+ +Y CG TV D+AH+G+AR  +  DV++R L     
Sbjct: 1   MTLRVSNTLSGEREEFEPADPDNVLLYYCGLTVSDYAHLGHARTWVHVDVIHRWLEALGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V NITD+++KI+ R  +        D    + +    Q + D   L        
Sbjct: 61  D--VRHVENITDVNEKIVARVGEPADGDTFGDDEGDVATHFIDQLLSDMRSLNLKRAEVY 118

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + H+P++I LI+ ++  G+AYE+N  + FD +    YG  S ++++  +      E+
Sbjct: 119 PRVSEHVPEIIDLIETLVERGYAYESNGSVYFDVTEFEEYGKLSNQRLEAVEAQGPETEQ 178

Query: 183 YHKKNPADFILWKR--------------------STPMEPGWESPWGRGRPGWHIECSAM 222
             K++PADF LWK                      +P    W SPWG GRPGWHIECSAM
Sbjct: 179 AEKRHPADFALWKAGGVSESALEEHRDADCEYATESPAGQTWASPWGEGRPGWHIECSAM 238

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           S  +L    DIH GG DL+FPHHENEIAQS  A   E+ A  W+H     ++  KMS S 
Sbjct: 239 SMTHLDDSIDIHMGGRDLVFPHHENEIAQSEAATG-EQFARYWLHADLFQMDDEKMSSSL 297

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--- 339
           GNFI ++E +              +R+  L   Y     ++   + EA     +      
Sbjct: 298 GNFIPVSEAVARFGVNP-------LRMFFLSASYNSTQTYSEAAIEEALERWDRLAAAYE 350

Query: 340 ------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
                                +    + A   A+ +D NT  A+ AL  LA     + D 
Sbjct: 351 RAAAAADSPAAGTKVDSPLGEAVEAAEAAFTEAMNDDFNTREALSALFDLASAINSHLDD 410

Query: 382 LPIFNASA-------------HILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFS 426
              ++  A              +LG +       +       +E L++ R    + + + 
Sbjct: 411 RDRYDYRALRRGIEAFERLGGDVLGFDFDGSADGEAALAGELVELLLEVREAEREAENYE 470

Query: 427 SADYIRKQLESKGFILEDYKNPDN 450
            AD IR  +E+ G  ++D  +   
Sbjct: 471 RADKIRDDIEALGVEIQDTDDGAE 494


>gi|323495762|ref|ZP_08100832.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323319229|gb|EGA72170.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 456

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 145/459 (31%), Positives = 212/459 (46%), Gaps = 25/459 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + +++T+ R+   FQ+I+ + + +Y CGPTVYD+AH GN R  +  D L R+L    
Sbjct: 3   PTALSLFDTMARQQRPFQSIENNTVGLYACGPTVYDYAHAGNLRTYLFVDTLRRVLSLNG 62

Query: 62  GEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  V +V NITD+     D      + E  +   N +   I       F+ D  +L  L
Sbjct: 63  YQ--VNHVMNITDVGHLTSDADTGEDKMEKGARKQNKSAWEIAQYFEHAFLADLEQLNIL 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            PT   RAT HI + I  I  +   G  Y+  + + FDTS +  YG  +R      + G 
Sbjct: 121 TPTTICRATEHIQEQIDFIAQLEEKGFTYQTRDGLYFDTSKLAEYGQLARLDKTGLEAGI 180

Query: 178 RVPEKYHKKNPADFILWKRSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           RV +   KK   DF LWK S   E    W SPWG G PGWHIECSAM+  YLG+ FDIH 
Sbjct: 181 RV-DMAEKKLATDFALWKFSGEQERQMEWPSPWGVGFPGWHIECSAMAEKYLGEQFDIHV 239

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG D I  HH NEIAQ    +   + AN W+H  FL L   K+SKS G  + +  L+E  
Sbjct: 240 GGEDHIPIHHTNEIAQCQAKNGRIQ-ANYWLHGFFLQLNKEKISKS-GTSLRLEALIE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------ID 348
               R +     R   L  HYR  + FT + L  A+  L +     T             
Sbjct: 296 ----RGFEPLAYRYLTLTGHYRSHLSFTWESLQGAQTALKRLRNKVTKLADGGQIIDEYQ 351

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
                 +  DLN   A+  L ++      + D          I  +++      + +   
Sbjct: 352 QRFFQLINQDLNMPKALALLWEVLDSGYSSQDKKATALFFDQIFALDINH-VEQEKVPED 410

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
           + +L  +RL + + K+F+ AD IR+Q+   G+ + D  +
Sbjct: 411 VMQLALQRLAMKQQKRFAEADKIREQINQLGYQVADKGD 449


>gi|326386996|ref|ZP_08208606.1| cysteinyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326208177|gb|EGD58984.1| cysteinyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 485

 Score =  427 bits (1099), Expect = e-117,   Method: Composition-based stats.
 Identities = 146/496 (29%), Positives = 221/496 (44%), Gaps = 55/496 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + + ++N+L R+   FQ + P   R+Y CGPTVY++ HIGN R  +  DVL R L Y  
Sbjct: 4   PRPLVLFNSLTRQSEPFQPVHPGEARVYSCGPTVYNYPHIGNMRAYVFADVLGRTLTYKG 63

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  +T+V NITD+    DD      + E  +     +I  I    TQ +  D   L   
Sbjct: 64  YK--LTHVINITDVGHLTDDADDGEDKMEKAAAQGAQSIWDIARHYTQAYWADIAALNIR 121

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P     AT++IPQMI   + I    H YE    + FD  S+ +YG  +R   +E +   
Sbjct: 122 QPAQWSIATDYIPQMIAFAEKIADK-HCYELPTGLYFDVGSVADYGRLARATTEEGE--G 178

Query: 178 RVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+ +   K++ ADF +W+++ P E     W+SPWGRG PGWH+ECS MS   LG  FDIH
Sbjct: 179 RIEDVEGKRHKADFAIWRKTPPGEKRQMEWDSPWGRGAPGWHLECSVMSGALLGFPFDIH 238

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKT-------ANIWIHNGFLNLEGRKMSKSNGNFIT 287
            GG+D    HH NEIAQ+                A +W+HN FL     KMSKS+G F+ 
Sbjct: 239 TGGIDHREIHHPNEIAQNQAFRCAGSLTDPANSGARMWLHNNFLVERSGKMSKSSGEFLR 298

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
           +  L++      R +     R+  L  HYR  ++F+ + L  A   L +           
Sbjct: 299 LQLLID------RGYHPLAYRMMCLQAHYRSELEFSWEGLGAALTRLKRLVMAVGQLKER 352

Query: 345 ------------GIIDPAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                               +A+  DLNT  A+  L ++   +     + L        +
Sbjct: 353 AAEPAAAPGPKFADALDRFDAAMSEDLNTPVALTVLDEIVGMKKVDPAEKLAAIALVDSV 412

Query: 392 LGIEV---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           LG ++          +         AI +++  R      K F+ +D +R +L + G  +
Sbjct: 413 LGFDLLTLDRAALRLRPRTATIDEAAIAEVLDARRAARADKDFARSDALRDELAAAGVDV 472

Query: 443 EDYKNPDNGQRMTRWK 458
            D  +P        WK
Sbjct: 473 MDG-DPLGWD----WK 483


>gi|47226781|emb|CAG06623.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 499

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 154/512 (30%), Positives = 228/512 (44%), Gaps = 93/512 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K++N+L ++              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 11  DTGLKVFNSLTKQKEPLILAREGVATWYSCGPTVYDHAHLGHACSYVRFDIVQRILTRLF 70

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V +   +TDIDDKII+R+         N   ++I S    +F +D   L  + P  
Sbjct: 71  G-ITVIHAMVVTDIDDKIIKRS------WEENICSTVIASLYEDEFKRDMLSLKVIPPAV 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T ++PQ++  I+ II +GHAY A   ++ FD  SI   YG F           ++ 
Sbjct: 124 YLRVTENVPQIVSFIERIIENGHAYAAREGDVYFDIKSIGERYGKFGGA------ADSQP 177

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               HK++  DF LWKRS   EP WESPWGRGRPGWHIECS ++S   G   DIH GG+D
Sbjct: 178 EPGSHKRDARDFALWKRSKAGEPSWESPWGRGRPGWHIECSTIASTVFGSQLDIHSGGID 237

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    +  + AN ++H+G L+L+    KMSKS  N+ITI + L     
Sbjct: 238 LAFPHHENEIAQSEAYHQCGQWANYFLHSGHLHLKSSAEKMSKSLKNYITIKDFL----- 292

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------I 347
             +S+ A   R+  L++ YR  +D++   + EA   L          G           +
Sbjct: 293 --KSFSANEFRMFCLLSKYRSAVDYSDGSMLEARSSLGSICSFMHDAGAYMKGQLQCTSV 350

Query: 348 DPAVL------------SALYNDLNTVSAIQALHKLARESTKN----------------- 378
             A L             AL  D +T  A+ A+  L   + +                  
Sbjct: 351 QEAFLWERLAEAKSSVVEALAEDFDTPRAVSAVMNLVHHANRQLQPVSKGGEGARSPAVF 410

Query: 379 HDLLPIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSA---- 428
             ++        + GIE+ +            +   +E+L + R  +     F+ A    
Sbjct: 411 AAIVSYIRDILDVFGIELLRSTETSASGLCGSLEGVVEQLTRFRSEVRA---FALARHDS 467

Query: 429 -----------------DYIRKQLESKGFILE 443
                            D +R  L   G IL+
Sbjct: 468 PTEPGLHPERIPLLKACDALRNDLAPLGVILK 499


>gi|294507027|ref|YP_003571085.1| Cysteinyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343355|emb|CBH24133.1| Cysteinyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 569

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 143/519 (27%), Positives = 221/519 (42%), Gaps = 69/519 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
               ++YNTL  +    + I+  ++R Y CGPTVY +AHIGN R  +  D++ R      
Sbjct: 56  SPTFRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIG 115

Query: 62  GEKCVTYVRNITDIDDKIIE-------RARQEHPSIPINDAI---SIITSKNTQQFVKDT 111
               VT V NITD+     +         + +       +       +    T+ F++D 
Sbjct: 116 --WDVTNVSNITDVGHLTQDDLVDPGGEDKMQRALEREGERFANIYDLARHYTEAFLEDW 173

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
             L    P  +PRAT H+   +  +  ++   HAY  +  + F   S+ +YG  S     
Sbjct: 174 GALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGNTEA 233

Query: 172 EQKMGTRVP--EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +Q   T     E   K++P DF LWK        W SPWG G PGWHIECS M   YLG 
Sbjct: 234 QQLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQYLGD 293

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+H GG DLIFPHHE EIAQ+       +  N W+H  FL +EG KMSKS GNF  + 
Sbjct: 294 RFDLHTGGEDLIFPHHECEIAQNQSLAG-HQVVNYWVHTRFLQVEGEKMSKSKGNFYIVR 352

Query: 290 ELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +L+                       +R A++   YR+P +FT+  L  A   + ++   
Sbjct: 353 DLIAPGPDDDHVPDSVREQEGVDPLALRYALMQGQYRKPFNFTLDTLHTAARHVRRYQDA 412

Query: 341 ST------------------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           +                     G I    L A+ +DLNT +A  A     +   +   L 
Sbjct: 413 AERVDAALAADADGPDELGGRLGPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTDRLN 472

Query: 383 PI--------FNASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLILLK 421
                      + +  +LG+   +   ++              +S +I+ L+++R     
Sbjct: 473 GATARSARNWLDRTNALLGVVEPEHEADQRTDAGSENGLAPTHLSDSIDTLLEDREAARA 532

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +++ AD IR  LE+ G  + D  +       T W+++
Sbjct: 533 DGEYARADAIRDTLEALGIEVMDTPD------GTEWERQ 565


>gi|227537539|ref|ZP_03967588.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242676|gb|EEI92691.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 390

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 135/393 (34%), Positives = 186/393 (47%), Gaps = 27/393 (6%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  + +YNT+ RK  +F  I PS + MYVCGPTVY   H+GN R  + FD+++R L + 
Sbjct: 1   MENNLVLYNTISRKKEKFNPIHPSMVGMYVCGPTVYSDVHLGNCRTFVSFDLIFRYLLHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIP----INDAISIITSKNTQQFVKDTTRLAC 116
             +  V YVRNITD      +R   +                I  K T  F         
Sbjct: 61  GYK--VRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLEPMEIVQKYTIGFHDVLRLFNT 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQ 173
           L P+ +P AT HI + I +I+ II +G+AYE N  + FD        +Y   + RK+++ 
Sbjct: 119 LPPSIEPTATGHISEQIEMIKQIIDNGYAYEVNGTVYFDVEKYVQKYDYTVLTNRKLEDL 178

Query: 174 KMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
              TR    +  KK   DF LW ++ P     W +PW  G PGWHIECSAMS+ YLG  F
Sbjct: 179 LNNTRELGGQDEKKGRLDFALWIKAKPEHIMRWPAPWSTGFPGWHIECSAMSNKYLGAQF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIHGGG+DL   HH NEIAQS   +     A  W+H   L + G +MSKS+GN     EL
Sbjct: 239 DIHGGGMDLAATHHTNEIAQSEACNHTSP-ARYWMHTNMLTVNGARMSKSSGNGFLPQEL 297

Query: 292 L-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                    R +    +R  ML  HYR  +DF+ + L  A+    +          I P+
Sbjct: 298 FTGNHPLLERGYSPMAVRFFMLQAHYRSTLDFSNEALDAADKGFKRLMNAIALLNKITPS 357

Query: 351 --------------VLSALYNDLNTVSAIQALH 369
                           +A+ +D N+   I    
Sbjct: 358 KATSGFNLEDIRKNCYAAMDDDFNSPILIAVTF 390


>gi|291524578|emb|CBK90165.1| cysteinyl-tRNA synthetase [Eubacterium rectale DSM 17629]
          Length = 475

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 158/482 (32%), Positives = 230/482 (47%), Gaps = 39/482 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL R+I          I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V  V NITD+     D      +    +   + ++  +  + T  F KD T +  
Sbjct: 61  GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSVMEVAKEYTDAFFKDFTAVHN 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKM 175
             P     ATN IP+ I++++ +I  G+AY A   + FDTS + +Y  FS     ++ ++
Sbjct: 119 RMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVEKEQLQV 178

Query: 176 GTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S  +LG+ 
Sbjct: 179 GVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISMKHLGEY 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D IFPHH NEIAQS            W H   LN    KMSKS G  +T++ 
Sbjct: 239 VDIHCGGVDNIFPHHTNEIAQSESYLG-HDWCKYWFHVNHLNDRAGKMSKSKGAILTVSV 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGII 347
           L E      + +     R   L +HYR+P++F+   L  A    +K  +       +G I
Sbjct: 298 LQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAELKDEGDI 351

Query: 348 DP--------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK- 398
           D             A+ NDLNT  AI  ++ + +    +   L + +    +L + + + 
Sbjct: 352 DETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLDLGLRES 411

Query: 399 --------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                      +  +   I   + ER    K K F++AD IR +L +KG  ++D +    
Sbjct: 412 GKALLEASSSADSELEAFINDKITERAAAKKAKDFATADAIRDELLAKGVAIKDTREGVK 471

Query: 451 GQ 452
            +
Sbjct: 472 WE 473


>gi|83815337|ref|YP_445146.1| cysteinyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|83756731|gb|ABC44844.1| cysteinyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 569

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 143/519 (27%), Positives = 221/519 (42%), Gaps = 69/519 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
               ++YNTL  +    + I+  ++R Y CGPTVY +AHIGN R  +  D++ R      
Sbjct: 56  SPTFRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIG 115

Query: 62  GEKCVTYVRNITDIDDKIIE-------RARQEHPSIPINDAI---SIITSKNTQQFVKDT 111
               VT V NITD+     +         + +       +       +    T+ F++D 
Sbjct: 116 --WDVTNVSNITDVGHLTQDDLVDPGGEDKMQRALEREGERFANIYDLARHYTEAFLEDW 173

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
             L    P  +PRAT H+   +  +  ++   HAY  +  + F   S+ +YG  S     
Sbjct: 174 GALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGNTEA 233

Query: 172 EQKMGTRVP--EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +Q   T     E   K++P DF LWK        W SPWG G PGWHIECS M   YLG 
Sbjct: 234 QQLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQYLGD 293

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+H GG DLIFPHHE EIAQ+       +  N W+H  FL +EG KMSKS GNF T+ 
Sbjct: 294 RFDLHTGGEDLIFPHHECEIAQNQSLAG-HQVVNYWVHTRFLQVEGEKMSKSKGNFYTVR 352

Query: 290 ELLETKKFGGR---------SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +L+                       +R A++   YR+P +FT+  L  A   + ++   
Sbjct: 353 DLIAPGPDDDHVPDSVREQGGVDPLALRYALMQGQYRKPFNFTLDTLHTAARHVRRYQDA 412

Query: 341 STSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           +                       I    L A+ +DLNT +A  A     +   +   L 
Sbjct: 413 AERVDAALAADADGPDELGGRLRPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTDRLN 472

Query: 383 PI--------FNASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLILLK 421
                      + +  +LG+   +   ++              +S +I+ L+++R     
Sbjct: 473 GATARSARNWLDRTNALLGVVEPEHEADQRTDAGSENGLAPAHLSDSIDTLLEDREAARA 532

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +++ AD IR  LE+ G  + D  +       T W+++
Sbjct: 533 DGEYARADAIRDTLEALGIEVMDTPD------GTEWERR 565


>gi|85858128|ref|YP_460330.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85721219|gb|ABC76162.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 769

 Score =  425 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 133/491 (27%), Positives = 233/491 (47%), Gaps = 56/491 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  I+ YN L R    F+ ++P  + M+ CGPT ++  HIG+ R  +V D++ R L +  
Sbjct: 303 ESTIRFYNVLSRSKNFFRPVNPDKVLMHSCGPTTHEVPHIGSYRRFVVSDLIRRYLEFRG 362

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V +V NI D+ D+ I  A +E         + + T++  + F+ D  +L       
Sbjct: 363 YE--VKHVLNIIDLADRSIRGAERE------GMDLGVYTARCEEVFLNDINKLNIKKDES 414

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PRA+ +   M+ L++ ++  G AYE    + FD S + +YG  S   +   + G R+  
Sbjct: 415 YPRASENFDSMVKLVEKLVDKGFAYEKLRSVYFDISKLRDYGCLSNIDLVRVQHGRRIDL 474

Query: 181 EKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           + Y K +P DF L KRST  E      +++ WG  RP WH+EC+A++ HYL   FDIH  
Sbjct: 475 DDYEKDSPVDFTLLKRSTLSELKRGVFFKTRWGNVRPSWHLECAAIAQHYLADTFDIHAS 534

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G D++FPH EN +A    A   ++ AN WI+   + + G+KMS+S  N +T+ +L     
Sbjct: 535 GSDIVFPHCENVMAIGKAATG-KRIANYWINTELVMVGGKKMSRSLNNALTLEDL----- 588

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTSKGIID- 348
              + +    +R  ++ +HYR+P++F+   L  A+  +        +  +    +G  D 
Sbjct: 589 -EKKGYSGREVRFFLVSSHYRKPLNFSFGALDTAKNTVLKLNGFIQRLIRLKAGEGDPDL 647

Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
                       +A+ +DLN   A+  L    ++ + +             +L       
Sbjct: 648 EQKLYDLRQGFTAAMDDDLNISGALAVLFDFVKKVSSSLAQGVLTVEQRDQVLEALKKID 707

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+   +E   + IS    +L++ R  L +  +++ AD IR++L   G ++ D     
Sbjct: 708 DVLGVMKFEE---EQISEEALQLMKRREALRQEGRWAQADEIRQRLLDMGVVVADTPEGM 764

Query: 450 NGQRMTRWKQK 460
                  W+ K
Sbjct: 765 V------WRLK 769


>gi|298246065|ref|ZP_06969871.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297553546|gb|EFH87411.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 395

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 139/408 (34%), Positives = 206/408 (50%), Gaps = 33/408 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL + I  F  +      +YVCG T YD  H+G+A   + FD L R L       
Sbjct: 1   MKLFNTLTQSIDPFTPLKQGLATLYVCGVTPYDTTHLGHAFTYVSFDTLIRYLEAQG--I 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TDIDD ++ +AR+      +N A   +  + T +F+ D   L    P    R
Sbjct: 59  TVRYVQNVTDIDDDVLRKARE------LNMAWDELGRRETARFLGDMDALNVRRPDVYAR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR--------KIDEQKMG 176
           AT+ IP ++ ++Q+++  G AY +   + +     P++G+  R          +D     
Sbjct: 113 ATDAIPDIVEIVQDLVEKGLAYVSEGCVFYSVKQDPDFGTLGRAIGLNDYQSMLDVANER 172

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE   K +P DF+LW+   P EP W SPWG GRPGWHIECSAMS  +LG+  DIHGG
Sbjct: 173 GNFPEDKRKHDPLDFVLWQAQAPGEPAWPSPWGPGRPGWHIECSAMSIRHLGQQIDIHGG 232

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHH  EIAQS      +  +  W+H G +  +G KMSKS GN   I+ LL+T  
Sbjct: 233 GADLAFPHHTCEIAQSEHYTGKKPFSQFWMHTGMVYQDGEKMSKSLGNLTLISNLLKT-- 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------SKGIID 348
                +   VIR+ +   HYR+P + T + L++A+  +  + Q               + 
Sbjct: 291 -----YSPDVIRVTLQSHHYRQPWECTPEDLSKAQETIELFKQVRRLVGEESHGEDAQVR 345

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--PIFNASAHILGI 394
                A+ NDL+  +A+  L + A+    N DL         A +LG+
Sbjct: 346 ALFQQAMENDLDAPTAVSGLREAAQTVIANRDLNAGAEVIRQARVLGL 393


>gi|149057584|gb|EDM08827.1| rCG43187, isoform CRA_a [Rattus norvegicus]
          Length = 549

 Score =  425 bits (1092), Expect = e-116,   Method: Composition-based stats.
 Identities = 160/529 (30%), Positives = 241/529 (45%), Gaps = 98/529 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  K           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTSVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N + + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  IQ II HGHAY  A   + FD  +  + YG      ++     T  
Sbjct: 147 YLRVTENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKL----VNTVPSATAE 202

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+D
Sbjct: 203 PVDSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGID 262

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 263 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLQT--- 319

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
               +   V RL  L T+YR  ID++   L EA  LL                       
Sbjct: 320 ----FSPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPV 375

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
                         AV +AL ND +T  A+ ++  L   + +                  
Sbjct: 376 GEDVLWERLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVF 435

Query: 380 -DLLPIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++         +GI + K      +     +   +++LV+ RL + +   ++ A    
Sbjct: 436 GAIVAYVEQFFETVGISLAKRQCVSGDSSTVALHCVVDELVRFRLKVRQ---YALATPGA 492

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                              D +R+ L + G  ++D      G   + W+
Sbjct: 493 TGEARKQQLQERQPLLEACDALRQDLMTHGINVKD-----RGHAASTWE 536


>gi|225155153|ref|ZP_03723648.1| Cysteine--tRNA ligase [Opitutaceae bacterium TAV2]
 gi|224804100|gb|EEG22328.1| Cysteine--tRNA ligase [Opitutaceae bacterium TAV2]
          Length = 472

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 163/477 (34%), Positives = 238/477 (49%), Gaps = 44/477 (9%)

Query: 3   KKIKIYNTLERKITEFQAID-PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             I+++++L R+  E          R Y CGPTVY  AHIGN R  +V D++ RLL   +
Sbjct: 1   MSIRLHDSLSREARELAPSHADGFFRFYNCGPTVYAPAHIGNFRTFVVNDLIRRLLEIEF 60

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V +VRN+TD+DDK I R+R+E   +      + +T + T++F  D T L CL P  
Sbjct: 61  GPDRVRHVRNLTDVDDKTIRRSREEKRPL------ADVTLQWTEKFHADCTALGCLPPHV 114

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +P AT HI + I +I  +   GHAY A +  + F  +S P YG+ SR K  E K G+ + 
Sbjct: 115 EPAATTHIAEQIDMIAILERKGHAYRAADGSVYFKVNSFPGYGALSRVKERELKPGSALA 174

Query: 181 ----------EKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHYLG 228
                     +   K++ +DF LWK   P   +  W SPWG+GRPGWHIECSAMS  +LG
Sbjct: 175 SGNAAPAAAHDSDEKEDGSDFALWKARKPEDGDVFWPSPWGQGRPGWHIECSAMSKKHLG 234

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
              D+H GG+DL+FPHHENEIAQS C +     A  W H+  L ++G+KMSKS  N  T+
Sbjct: 235 DTIDLHTGGVDLLFPHHENEIAQSQCCNGT-LFARHWYHSEHLLVDGKKMSKSLNNLYTL 293

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------ 342
           ++L E             +R A+L  H R+ ++FT+  L  AE  L+             
Sbjct: 294 DQLREM------GHTPAALRYALLAGHPRKQLNFTLDSLHAAEKALATLRHFRDSLVKRG 347

Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG---- 393
                +      AVL+AL  DLNT +A+ AL                  A   ++     
Sbjct: 348 LKPDHAPSTRFDAVLNALREDLNTPAALGALFGEINSYDHRPAHHGDLAAFDRVIQQALG 407

Query: 394 --IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
             +          I      L ++R    + K +++AD +R Q+ + G+ + D K+ 
Sbjct: 408 LDLTPLPPPPPAEIPAETAALAEQRWTAKQQKNYAAADALRAQIAATGWTMIDRKDG 464


>gi|302834082|ref|XP_002948604.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
           nagariensis]
 gi|300266291|gb|EFJ50479.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
           nagariensis]
          Length = 509

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 165/504 (32%), Positives = 235/504 (46%), Gaps = 76/504 (15%)

Query: 7   IYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
            +NT+ +    F+  +    + MYVCG TVYD++HIG+AR  + FDVLYR L    G   
Sbjct: 22  FFNTMSKSKELFRPRLADGRVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLTAACGYD- 80

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V YVRN TDIDDKII RA+Q           S +T +  ++F +D   L  L PT +PRA
Sbjct: 81  VQYVRNFTDIDDKIIARAQQS------GVDPSELTERFIREFNQDMAALNVLTPTLEPRA 134

Query: 126 TNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           T  +PQMI  I  I+ HGHAY     ++ FD +S+  YG  S R +++ + G RV     
Sbjct: 135 TAFVPQMISTITAIMQHGHAYAVEGGDVFFDVTSLEGYGRLSGRALEDNRAGERVAVDGR 194

Query: 185 KKNPADFILW-----KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           K++PADF L             PG     G G   W   C   +S +L   +     G D
Sbjct: 195 KRSPADFALILVCLGGTGRDGPPGIVIFGGWGF-SWF-RCFRAASGFL-VGWPQFLRGRD 251

Query: 240 LIFPHHENEIAQSCCADR-------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           L+FPHHENE+AQS  A                W+HNGF+N++  KMSKS GNF TI ++L
Sbjct: 252 LVFPHHENELAQSQAACGYPDQLHNGTDFVRYWLHNGFVNVDSEKMSKSLGNFFTIRDVL 311

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------- 343
                   S+    +R  +L   YR P++++ + L EA   L    Q             
Sbjct: 312 S-------SYHPLALRWFLLAAQYRAPLNYSDKGLEEASSRLYYVIQARADVEPAATSSS 364

Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNAS- 388
                  ++   VLSAL +DLNT +A+ AL    R            K  D L +     
Sbjct: 365 SSTSSGAVLVSEVLSALADDLNTPAAVGALSGPLRTINDLMTTKAGRKRPDRLAVLAQLH 424

Query: 389 ------AHILGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                   +LG+E           E   +  +  +E+L+Q  +   + K F+ +D IR +
Sbjct: 425 VAMGVVMELLGMEPNSGTKQQPQLEGSLEGAAAGLEQLLQL-IQARQAKDFARSDAIRLE 483

Query: 435 LESKGFILEDYKNPDNGQRMTRWK 458
           L S+G +L D        + T W+
Sbjct: 484 LASRGILLLDT------PKGTTWR 501


>gi|162447013|ref|YP_001620145.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|187629784|sp|A9NEI9|SYC_ACHLI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|161985120|gb|ABX80769.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 434

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 154/452 (34%), Positives = 219/452 (48%), Gaps = 34/452 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  KI EF+ I    + MYVCGPTVYD  HIGN RP++ FDV+ R L+Y     
Sbjct: 2   LKIYNSLSNKIEEFKPIHEKKVNMYVCGPTVYDDIHIGNGRPVVFFDVVKRYLQYLDYG- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y  NITD+DDKII+RA++ H           + +  T  F +   ++        P 
Sbjct: 61  -VKYASNITDVDDKIIDRAQKLH------ITEKELATTYTNNFFEIAKKIGGYNFDVTPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           ATN+I +MI  I  +I  G AY+  + + F    I +YG  S +++ + K G R+  +  
Sbjct: 114 ATNYIEEMIKFIGELISDGFAYKTQSGVYFRVDKIKDYGILSNQQVKDLKTGVRIDLETD 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+   DF LWK +      + +PWG GRPGWH EC  M++   G   DIHGGG DL FPH
Sbjct: 174 KEKDYDFALWKNTEEG-IKYHAPWGDGRPGWHTECVVMTNEIFGGEIDIHGGGFDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQS  A      A  W+H G L+L   KMSKS GN I + +L++        +  
Sbjct: 233 HENEIAQS-VAKHDHHLAKYWMHVGRLDLANEKMSKSLGNDIKLKDLVQV-------YNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAVLS 353
              RL +L  HYR PI F+   + + +    K   T             ++  +D   + 
Sbjct: 285 NAYRLMLLAHHYRAPIQFSDDLIEQYQKAYDKISYTLNKWHFHMILNNINENGLDHESME 344

Query: 354 A----LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                + +D  T   I  + KL ++  K   +   +N    IL       ++ + +   I
Sbjct: 345 YFEGFMNDDFATPRVISLIDKLIKDLNKAFKV-ENYNTIIQILSTLGINPNILEVLEDDI 403

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +            K +  AD  RK L  KGFI
Sbjct: 404 QNY-NNWQQARLEKNYEKADIYRKPLLDKGFI 434


>gi|149186074|ref|ZP_01864388.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148830105|gb|EDL48542.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 482

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 143/494 (28%), Positives = 223/494 (45%), Gaps = 53/494 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +K++N+L R++  F  + P   R+Y CGPTVY++ HIGN R  +  DVL R L +  
Sbjct: 3   ETPLKLFNSLTREVETFTPVHPGEARVYTCGPTVYNYPHIGNMRAYVFADVLGRTLSWKG 62

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  +T++ NITD+    DD      + E  +     +I  I    T+ +  D   L   
Sbjct: 63  YD--LTHIINITDVGHLTDDADEGEDKMEKMAAEKAQSIWDIAKHYTEAYWADVKALNIR 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P     AT++I +MI   + I    H YE  + + FD S+I +YG  +R   ++ +   
Sbjct: 121 QPAKWSVATHYIDEMIEFAKGIADK-HCYELESGLYFDVSTIEDYGKLARAVTEDGE--G 177

Query: 178 RVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+     K+N ADF +W+++   E     W+SPWG+G PGWH+ECS M    LG  FDIH
Sbjct: 178 RIDTVEGKRNAADFAIWRKTPAGETRQMEWDSPWGKGAPGWHLECSVMGGKLLGFPFDIH 237

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKT-------ANIWIHNGFLNLEGRKMSKSNGNFIT 287
            GG+D    HH NEIAQ+                A IW+HN FL     KMSKS G F+ 
Sbjct: 238 TGGIDHREIHHPNEIAQNQAHCCTNGLDVAENSGARIWMHNNFLVERSGKMSKSAGEFLR 297

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI- 346
           +  L++      + +     R+  L  HYR  ++F+ + L  A   L +           
Sbjct: 298 LQLLID------KGYHPLAYRMMCLQAHYRSELEFSWEGLQAALTRLKRIVMQVERLEDD 351

Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHILG 393
                       +     +A+ +DLNT  A+ AL + LA +         +      +LG
Sbjct: 352 LAGDPSHQKFAPMREKFAAAISDDLNTSVALVALEEALAVKKVDGSVKRAVVEDMDRVLG 411

Query: 394 IEVCK---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           + +             + K     IE  +  R      K ++++D IR  L +KG  + D
Sbjct: 412 LNLFDLTRENLRIRPKVAKISESEIEAEILRRKEAKVAKDYANSDAIRASLAAKGVEVMD 471

Query: 445 YKNPDNGQRMTRWK 458
             +P   +    WK
Sbjct: 472 G-DPLGWE----WK 480


>gi|19173375|ref|NP_597178.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74697526|sp|Q8SRE0|SYC_ENCCU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|19170964|emb|CAD26354.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 480

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 152/490 (31%), Positives = 240/490 (48%), Gaps = 58/490 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M K +K+YN++ R I  F     + ++MY+CGPTVYD +HIG+AR  ++FDV+ R+L   
Sbjct: 1   MDKTLKLYNSITRTIDIFTPRKGNEVKMYICGPTVYDSSHIGHARTYVMFDVIRRVLSD- 59

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y +  V +V NITDIDDKII RA +         ++  +T K T++F +D   L   +P+
Sbjct: 60  YLKYNVRFVMNITDIDDKIIARANETGA------SMEEVTRKYTEEFFEDMKTLNVRSPS 113

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
                T+++ +++  I+ +  +G AYE+   + FD +S     S+   K  +  + +   
Sbjct: 114 FVTFVTSYVDKIVKFIEKLEANGLAYESRGSVYFDLNSYQQRYSYPLFK-SKDGINSEGD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K++P DF+LWKRS   EP +ES WG GRPGWHIECS MSS  LG+  DIH GG+DL
Sbjct: 173 ENKDKRSPCDFVLWKRSKENEPRYESKWGHGRPGWHIECSVMSSDILGEDLDIHAGGVDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQ       E     ++H G LN+ G KMSKS  NF TI E L+T      
Sbjct: 233 AFPHHENEIAQCQAYFMQEPWVKCFLHTGHLNISGLKMSKSLKNFTTIKEALKT------ 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
                 +R+  L   + + +++  + L  AE +  K                        
Sbjct: 287 -ISPRQLRVLFLHHQWNKDMNYEKEHLKFAETIEKKIFNFMSVAESMRKNALAFETLENA 345

Query: 338 -PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
             +     G +  AV +AL ++++T + ++ + ++   +              +      
Sbjct: 346 DREVLRELGNVQEAVHAALLDNVDTPAVMKRIVEMINFTNARIKTISPSTVLVVKDYIKE 405

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLV-----QERLILLK----MKKFSSADYIRKQLESK 438
              +LG+   +E         I +L+       R +  +     K     D+IR+ ++  
Sbjct: 406 ITDVLGLS-EEERQESPGEDLIAQLLSNFRESIREMARRKEPYSKFLEKCDWIRESIKDY 464

Query: 439 GFILEDYKNP 448
           G+I+ED    
Sbjct: 465 GYIIEDNSEG 474


>gi|15790190|ref|NP_280014.1| hypothetical protein VNG1097G [Halobacterium sp. NRC-1]
 gi|169235919|ref|YP_001689119.1| cysteine--tRNA ligase [Halobacterium salinarum R1]
 gi|21264026|sp|Q9HQL9|SYC_HALSA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|10580644|gb|AAG19494.1| cysteinyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726985|emb|CAP13771.1| cysteine--tRNA ligase [Halobacterium salinarum R1]
          Length = 494

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 149/502 (29%), Positives = 233/502 (46%), Gaps = 71/502 (14%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           NT   +   F+  DP N+ +Y CG TV D AH+G+AR  +  DV+ R L +      V +
Sbjct: 7   NTRSGEQEAFEPDDPENVLVYTCGLTVSDDAHLGHARLWVQSDVMTRWLSHAGYG--VRH 64

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V+N+TD+++KI+ R   +     + D  + + +  TQ  + D   L        PR + H
Sbjct: 65  VQNVTDVNEKIVARVGADG----LGDTEAAVAAHYTQSVIDDMRALNLARADVYPRVSEH 120

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           +P++I LI +++  G+AYEA   + FD      YG+ S +++DE        E+  K++P
Sbjct: 121 VPEIIDLIGDLVDAGYAYEAGGSVYFDVRRFEEYGALSGQQVDELDPQGPDAEQAEKRHP 180

Query: 189 ADFILWKRST-----------------PMEPG--WESPWGRGRPGWHIECSAMSSHYLGK 229
           ADF LWK                      E G  W SPWG GRPGWHIECSAM+  +L  
Sbjct: 181 ADFALWKAGGVSPDDANTHRDDELPPLDGERGQTWASPWGEGRPGWHIECSAMAMTHLDD 240

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG DL+FPHHENEIAQS  A   E+ A+ W+H   L  +G KMS S GNF T++
Sbjct: 241 HIDIHVGGQDLVFPHHENEIAQSEAASG-ERFADHWLHVRLLETDGEKMSSSLGNFFTVS 299

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
             +  +          V+R+ ++ T Y +   ++   ++EA     +  +          
Sbjct: 300 NAVAERG-------PNVVRMLLVSTSYTQRQTYSEATVSEATQRWERLQRAHERAADAID 352

Query: 341 -------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------- 378
                         T+         +A+  D NT +A+ AL +LA    ++         
Sbjct: 353 SVAAHAKPADDALRTAVADARGEFAAAMRADFNTRAAVSALLELASAVNRHVDGTDTYDY 412

Query: 379 ---HDLLPIFNAS-AHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYI 431
              HD +  F      +LG++         +S+A   I+ ++  R        +  AD +
Sbjct: 413 QGLHDAVDAFETLGGDVLGLQFDDGAGEDAVSLADDVIDLVLDVREQERTAGNYERADDL 472

Query: 432 RKQLESKGFILEDYKNPDNGQR 453
           R +LE+ G  +ED  +    +R
Sbjct: 473 RDRLEALGVSVEDTDDGATVRR 494


>gi|148927563|ref|ZP_01811041.1| cysteinyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147887091|gb|EDK72581.1| cysteinyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 484

 Score =  424 bits (1090), Expect = e-116,   Method: Composition-based stats.
 Identities = 151/491 (30%), Positives = 227/491 (46%), Gaps = 55/491 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNT  RK+ EF  ++P  + +Y CGPTVYD+  +GN    I +D L R LR      
Sbjct: 2   LTLYNTPHRKLEEFTPVEPGKVSVYTCGPTVYDYLTVGNWIAYIRWDTLVRTLRANGL-- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            VT+  NITD+     D+     + +  +         I +  T  F++   +L  L P 
Sbjct: 60  AVTHAMNITDVGHLTSDEDHGEDKMQKGARREGKTAWDIAAFYTNDFLEGMKQLNLLTPE 119

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H P+AT +IPQ + L++ +   G  Y+ ++ I FDTS  P Y  F+   +D  K G RV 
Sbjct: 120 HIPKATEYIPQQLELVRALKQKGFTYQIDDGIYFDTSKFPRYAQFAHLDLDALKAGARVE 179

Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPW--------GRGRPGWHIECSAMSSHYLGK 229
               K++P+DF LWK + P E     W++P          +G PGWH+ECSAM+    G 
Sbjct: 180 HNAKKRSPSDFALWKFTQPGEIRDMEWDTPIDLLDEGEPRKGFPGWHLECSAMAMDIFGP 239

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+D I  HH NEIAQS  A   +  A  WIH   +  +G K+SKS GN  T+ 
Sbjct: 240 TLDIHAGGIDHIPVHHTNEIAQSEAAT-DKLFARYWIHCNHIKADGTKISKSLGNGYTLQ 298

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------- 342
           +L        R +     R   L +HYR   +FT + L  A+   + W + +        
Sbjct: 299 DL------ATRDFSPLDYRTFALQSHYRTEGNFTWENLEGAKNRRAHWREIAALRWQTYD 352

Query: 343 -----SKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTKNH-------D 380
                S+   D            +L AL +DLNT  A+Q + ++  E  K+         
Sbjct: 353 TLVDDSEKTTDERTVQLINARQEILLALNDDLNTPLALQIIDEVFSELEKHRPVDIQQSA 412

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           L  +      +LGI++       +IS   ++L+ ER    + K F  +D +R  L     
Sbjct: 413 LEDLLTFIDDVLGIKLLDS--TPDISDEAKQLILERQQAREAKDFKKSDELRDTLLKHNI 470

Query: 441 ILEDYKNPDNG 451
            L D ++    
Sbjct: 471 GLRDTQSGTLW 481


>gi|300711054|ref|YP_003736868.1| cysteinyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299124737|gb|ADJ15076.1| cysteinyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 495

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 143/500 (28%), Positives = 227/500 (45%), Gaps = 69/500 (13%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  +  EF+      + +YVCG TV D AH+G+AR  +  DV+ R L +     
Sbjct: 2   LSVTNTLSDEREEFRP-TGDEVLVYVCGLTVSDDAHLGHARVWVHADVMCRWLSHEG--H 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N TD+++KI  R  +      +  +   +  +  +  ++D   L     T  PR
Sbjct: 59  AVRHVENFTDVNEKIAARIDEG----DLGGSELGVARRFIEGTLEDMRGLNLQRATVYPR 114

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+P+++ LI+ ++  GHAYE++  + FD ++   YG  S +++ + +      E+  
Sbjct: 115 VSEHVPEILALIERLLESGHAYESDGSVYFDVTTFEEYGKLSNQRVTDLEAQGDPTERSE 174

Query: 185 KKNPADFILWK-----------------RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
           K+NPADF LWK                    P    W+SPWG GRPGWHIECSAM+  +L
Sbjct: 175 KRNPADFALWKAGGVSESAIRDHEKVDHAHPPDGETWDSPWGEGRPGWHIECSAMAMTHL 234

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
            +  DIH GG DL+FPHHENEIAQS  A   +  AN W+H G L  +G KMS S GNF T
Sbjct: 235 DETIDIHVGGHDLVFPHHENEIAQSEAATG-KPFANYWLHTGLLETDGEKMSSSLGNFFT 293

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
           ++  L+        +   V+R   L T Y     F+   + EA+    +  +        
Sbjct: 294 VSAALD-------EFGPDVLRSFYLATEYGSNQTFSEDAMAEAKERYERLERAYERAIEA 346

Query: 344 ---------------KGIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
                          +  I+ A    + A+ +D     A+ AL +LA    ++ D    +
Sbjct: 347 ADGPDARTKIEDHELRAAIEEARGEFVRAMNDDFGVREAMSALLELAGALNRHLDAREEY 406

Query: 386 NASA-------------HILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADY 430
           +  A              I G        +        +E +++ R    +   +  AD 
Sbjct: 407 DYRALRRAIETIEGFGGEIFGFSFGSGAGDGVDLAGDLVELVLEVREAEREAGNYERADA 466

Query: 431 IRKQLESKGFILEDYKNPDN 450
           +R+ LE+ G  +ED    + 
Sbjct: 467 LREDLEALGVTVEDEAEGEG 486


>gi|162448886|ref|YP_001611253.1| hypothetical protein sce0616 [Sorangium cellulosum 'So ce 56']
 gi|161159468|emb|CAN90773.1| cysS1 [Sorangium cellulosum 'So ce 56']
          Length = 529

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 161/538 (29%), Positives = 247/538 (45%), Gaps = 105/538 (19%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++TL +K+       P  +RMY CGPT YD AH+G+ R  +  D+L R LR    
Sbjct: 2   PALRLHDTLTQKLAPLAPRRPGEVRMYCCGPTTYDVAHVGHGRAALAPDILVRHLRARGL 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YVRN+TD+DDKI++R+ +        +    ++++  + + +D   L CL P  +
Sbjct: 62  --RVVYVRNVTDVDDKILQRSAES------GEPPMDLSARMARLYQEDVAALGCLTPDVE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-----------IIFDTSSIPNYGSFSRRKID 171
           P+ + HIP++I L++ +I  G AY                + +   S P+YG  S+R +D
Sbjct: 114 PKVSEHIPEVIALVERLIERGAAYVVERPGDVRDVRDVRDVYYSVRSFPSYGKLSKRNLD 173

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           E ++G RV     K++P DF LWK   P   GW+SPWG+GRPGWHIECSAM+  YLG  F
Sbjct: 174 ELRVGARVGPCEDKRDPLDFALWKGVAPGGWGWDSPWGKGRPGWHIECSAMAGRYLGAGF 233

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADR-IEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H GG+DL+FPHHENEIAQS  A       A+IWIHNGF+N++  KM+KS GNF+ + +
Sbjct: 234 DVHCGGMDLVFPHHENEIAQSEAAHPEGAPLASIWIHNGFVNVDKEKMAKSLGNFVKLRD 293

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQT 340
           +               +R  +L  HYR P++F              + EAE  +     T
Sbjct: 294 VYARN-------DPEALRYFLLTVHYRGPLEFDTHKRDDGRVVFPGVVEAERRVDYLYAT 346

Query: 341 -------------STSKGIIDPAVLSAL----------------------YNDLNTVSAI 365
                          +    +P + + L                       +DLNT   +
Sbjct: 347 LDRLSALSALAGPPAAGEGAEPELPARLPKGFAALAALADGAPARAAAALDDDLNTPVVL 406

Query: 366 QALHKLARESTKNHDLL---------------------PIFNASAHILGI---------- 394
             + ++A+ + +  D                           +S  +LG+          
Sbjct: 407 SIIAEVAKAANELADAAQRRGKDQDVARAAPPLARRLHAALRSSLDVLGLLQTPSPVYQA 466

Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             +  +  L      AIE  + ER      K F+  D +RK+LE  G  + D      
Sbjct: 467 RTQEQRLGLLGTTRQAIEAKLAERAAARAAKDFARGDALRKELERDGIEVADSPTGTT 524


>gi|296128532|ref|YP_003635782.1| cysteinyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
 gi|296020347|gb|ADG73583.1| cysteinyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
          Length = 481

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 149/489 (30%), Positives = 228/489 (46%), Gaps = 60/489 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T  + + +F  +    + +Y+CG TV    H+G+ R  + FDVL R LR    
Sbjct: 1   MSLRLFDTGTQSVRDFVPLVEGEVGVYLCGATVQSPPHVGHVRSAVAFDVLVRWLRRSGA 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT VRN+TDIDDKI+ +A                  +N + F      L  L P ++
Sbjct: 61  --RVTMVRNVTDIDDKILAKAAA------AGRPWWAWALQNERAFASAYAALGVLPPDYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT H+P M+ L+  ++  GHAY A   ++ FD  S   YG+ + +++D+         
Sbjct: 113 PRATGHVPAMLELMDRLVERGHAYAAGPGDVYFDVRSWAEYGALTNQRVDDM-TDVPEDA 171

Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF LWK   P EPG   W++ +GRGRPGWH+ECSAM+  YLG+ FDIHGGGL
Sbjct: 172 GSGKRDPHDFALWKAPKPGEPGTAAWQTRYGRGRPGWHLECSAMAHRYLGESFDIHGGGL 231

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENE AQS  A      A  W+HNG++   G KMSKS GN + +  +LE     
Sbjct: 232 DLRFPHHENEQAQSRAAGYG--FARYWLHNGWVTQGGAKMSKSLGNGLLVTTVLE----- 284

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
               PA V+R A+    YR  +++T   L EA     +              V +A  ++
Sbjct: 285 --KAPAVVVRYALTAVQYRSMLEWTDDTLAEAAATWDRLAGFVQRAT---ERVGTASDDE 339

Query: 359 L-----------------NTVSAIQALHKLARESTKNHDLLP---------IFNASAHIL 392
           +                 N  +A+  +H+  R                          +L
Sbjct: 340 VAGVELPAAFAAALDDDLNVPAALAVVHETLRAGNSALAAGDDAAARAAMVTLRGMLDVL 399

Query: 393 GIEVCKEHL-----NKNISIAIEKLVQERLI----LLKMKKFSSADYIRKQLESKGFILE 443
           G++           +   + A++ LV+  L         + +++AD IR +L + G ++E
Sbjct: 400 GLDPGSAQWRTAGGDGRHAHALDALVRAELDARSAARAARDWATADAIRDRLTAAGVVVE 459

Query: 444 DYKNPDNGQ 452
           D        
Sbjct: 460 DSPTGARWT 468


>gi|268316373|ref|YP_003290092.1| cysteinyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
 gi|262333907|gb|ACY47704.1| cysteinyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
          Length = 504

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/508 (32%), Positives = 240/508 (47%), Gaps = 60/508 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            K +++YNTL R I     ++ + +R+Y CGPTVY +AHIGN R  +  D++ R+ +   
Sbjct: 5   SKTLRLYNTLTRSIEPIYPLERNRLRLYACGPTVYTYAHIGNFRSFLTADLIVRVAQALG 64

Query: 62  GEKCVTYVRNITDID-------------DKIIERARQEHPSIPINDAISIITSKNTQQFV 108
            +    YV N+TD+              DK+    R E      N     +    TQ F+
Sbjct: 65  WQ--TVYVCNVTDVGHLTVDDYADASGEDKLERALRSEEGRRFPNIW--DLARYYTQAFL 120

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-R 167
           +D   L  + P  +PRAT HI Q I  I+ ++  GHAYE    + F   S P+YG  S  
Sbjct: 121 EDWQTLKLVEPDVRPRATEHIRQQILAIEQLVKTGHAYETRQGVYFHVPSFPDYGKLSGN 180

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
           R  ++     R V +   K++P DF LWK+       W SPWG G PGWHIECS MS  Y
Sbjct: 181 RDPEQLARAVRDVVQDPEKRDPRDFALWKKDEKHLMQWYSPWGWGFPGWHIECSVMSMEY 240

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FD+H GG DLIFPHHE EIAQ+      +  A  W+H  FL +EG KMSKS GNF 
Sbjct: 241 LGETFDLHLGGEDLIFPHHECEIAQAESLTG-KPLARYWVHTRFLLVEGEKMSKSKGNFF 299

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----- 341
           T+ EL+   + GG+      +R A++   YREP++FT + L ++  ++ ++ + +     
Sbjct: 300 TVRELIFPPEAGGQGIDPMALRYALISGKYREPLNFTRKHLRDSIRIVQRYQEAARHVEA 359

Query: 342 -------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---- 384
                             I    L AL +DLNT  A+ A  +  +      D L      
Sbjct: 360 ALESDRSGPDRLGDRLSTIYDKTLEALCDDLNTPVALAAALEGVKLILGFGDQLNRASAE 419

Query: 385 -----FNASAHILGIEVCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                 +    +LG     E                +E+L+ ER    + + F+ AD IR
Sbjct: 420 SARRWLDQIDALLGFVYPPERPCAHTRREKDPFVEKVERLLAERDAARRARDFARADAIR 479

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +QL   G  + D          TRW++K
Sbjct: 480 EQLLQMGVEVMDT------PEGTRWRRK 501


>gi|6599474|gb|AAF18749.1|AF162864_1 cysteinyl-tRNA synthetase [Rhodothermus marinus]
          Length = 504

 Score =  423 bits (1087), Expect = e-116,   Method: Composition-based stats.
 Identities = 166/508 (32%), Positives = 240/508 (47%), Gaps = 60/508 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            K +++YNTL R I     ++ + +R+Y CGPTVY +AHIGN R  +  D++ R+ +   
Sbjct: 5   SKTLRLYNTLTRSIEPIYPLERNPLRLYACGPTVYTYAHIGNFRSFLTADLIVRVAQALG 64

Query: 62  GEKCVTYVRNITDID-------------DKIIERARQEHPSIPINDAISIITSKNTQQFV 108
            +    YV N+TD+              DK+    R E      N     +    TQ F+
Sbjct: 65  WQ--TVYVCNVTDVGHLTVDDYADASGQDKLERALRSEEGRRFPNIW--DLARYYTQAFL 120

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-R 167
           +D   L  + P  +PRAT HI Q I  I+ ++  GHAYE    + F   S P+YG  S  
Sbjct: 121 EDWQTLKLVEPDVRPRATEHIRQQILAIEQLVKTGHAYETRQGVYFHVPSFPDYGKLSGN 180

Query: 168 RKIDEQKMGTR-VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
           R  ++     R V +   K++P DF LWK+       W SPWG G PGWHIECS MS  Y
Sbjct: 181 RDPEQLARAVRDVVQDPEKRDPRDFALWKKDEKHLMQWYSPWGWGFPGWHIECSVMSMEY 240

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG+ FD+H GG DLIFPHHE EIAQ+      +  A  W+H  FL +EG KMSKS GNF 
Sbjct: 241 LGETFDLHLGGEDLIFPHHECEIAQAESLTG-KPLARYWVHTRFLLVEGEKMSKSKGNFF 299

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----- 341
           T+ EL+   + GG+      +R A++   YREP++FT + L ++  ++ ++ + +     
Sbjct: 300 TVRELIFPPEAGGQGIDPMALRYALISGKYREPLNFTRKHLRDSIRIVQRYQEAARHVEA 359

Query: 342 -------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---- 384
                             I    L AL +DLNT  A+ A  +  +      D L      
Sbjct: 360 ALESDRSGPDRLGDRLSTIYDKTLEALCDDLNTPVALAAALEGVKLILGFGDQLNRASAE 419

Query: 385 -----FNASAHILGIEVCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                 +    +LG     E                +E+L+ ER    + + F+ AD IR
Sbjct: 420 SARRWLDQIDALLGFVYPPERPCAHTRREKDPFVEKVERLLAERDAARRARDFARADAIR 479

Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +QL   G  + D          TRW++K
Sbjct: 480 EQLLQMGVEVMDT------PEGTRWRRK 501


>gi|57505460|ref|ZP_00371388.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016285|gb|EAL53071.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 454

 Score =  422 bits (1086), Expect = e-116,   Method: Composition-based stats.
 Identities = 152/463 (32%), Positives = 227/463 (49%), Gaps = 54/463 (11%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
             I MY+CGPTVYD AH+G+AR  I FD+L R+L      + + + RN TDIDDKI+++ 
Sbjct: 18  GVITMYLCGPTVYDHAHLGHARSSICFDLLRRVLLSLG--RKLYFARNYTDIDDKILKKM 75

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           ++        +++  IT K    + +D   L  L P  +P+AT +I QMI LI ++   G
Sbjct: 76  QES------GESLEQITQKYIAHYERDMKNLRVLEPDLKPKATEYIKQMIELILHLQRQG 129

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
             Y   + I FDTS   +Y S S+R  ++ +  TR+ E+  KKN ADF+LWK     E  
Sbjct: 130 FTYTLEDGIYFDTSKDKDYLSLSKRSFEDNQ--TRLNEQKEKKNEADFVLWKF---DEGF 184

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           + +P+G+GRPGWH EC AM         DIH GG+DL FPHHENE AQ  CA   +  A+
Sbjct: 185 YAAPFGKGRPGWHSECVAMIEALFKDSLDIHAGGVDLFFPHHENEAAQCRCAFN-KNLAS 243

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGF+N+ G KMSKS  N   I + L       + +    +R  ++  HYR   +++
Sbjct: 244 HWLHNGFVNINGEKMSKSLNNSFFIEDAL-------KEFSGEALRFYLMSVHYRAHFNYS 296

Query: 324 VQRLTEAEILLSKWPQTSTSKG-------------IIDPAVLSALYNDLNTVSAIQALHK 370
           ++ L+  +  L K  +                    +   +L AL +DLN   A+    +
Sbjct: 297 LEDLSLCKKRLDKLYRLKKRLDLNLLEDKPKKCERELSLTILQALQDDLNISKALALFDE 356

Query: 371 LARESTKNHD--------LLPIFNASAHILG------IEVCKEHLNKNISIAIEKLVQER 416
               +    D        L   F   A I G      I   ++  +K     IE  + +R
Sbjct: 357 FIANANLKLDENKALKEGLREDFKELAFIFGVGFEDVILYFQQGFSKEQIAWIETQIAKR 416

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               K K ++ AD +R+ L   G +L D        + T W++
Sbjct: 417 SEAKKAKDYALADKLRQDLAEFGVVLLDT------TQGTIWER 453


>gi|15639085|ref|NP_218531.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Nichols]
 gi|189025325|ref|YP_001933097.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|6094392|sp|O83129|SYC_TREPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|226735067|sp|B2S239|SYC_TREPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3322350|gb|AAC65085.1| cysteinyl-tRNA synthetase (cysS) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189017900|gb|ACD70518.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|291059509|gb|ADD72244.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
           Chicago]
          Length = 520

 Score =  422 bits (1085), Expect = e-116,   Method: Composition-based stats.
 Identities = 148/532 (27%), Positives = 229/532 (43%), Gaps = 92/532 (17%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL R+   FQ  +  ++R+Y CGPTVY++ H+GN R  +  D + R L +     
Sbjct: 3   LRVYNTLTRQQEHFQPWEHGHVRLYGCGPTVYNYPHLGNLRAYVFQDTVRRTLHFLGY-- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLAPT 120
            VTYV NITD+     +    E   +        ++  + +     F +DT  L    P+
Sbjct: 61  RVTYVMNITDVGHLESDADSGEDKLVRSAQAHGHSVLQVAAHYRAAFFRDTALLGIEEPS 120

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG---- 176
               A++ I  MI  I+ ++  GHAY A   + FD  S P+Y SF    +++ + G    
Sbjct: 121 IVCNASDCIQDMIAFIEQLLARGHAYCAGGNVYFDVRSFPSYESFGSAAVEDVQEGEDAA 180

Query: 177 -TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             RV    HK++  DF+LW   +        W+SPWGRG PGWHI CSAMS  +LG   D
Sbjct: 181 RARVAHDTHKRDARDFVLWFTRSKFVRHALTWDSPWGRGYPGWHIGCSAMSMKFLGPRCD 240

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR---------------- 276
           IH GG+D I  HH NE AQ             W+H+ FL ++ +                
Sbjct: 241 IHIGGVDHIRVHHRNERAQCEAITGA-PWVRYWLHHEFLLMQLQKRAVHADMGSSVVSSF 299

Query: 277 -KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS G F+T++ L E      R +     R  +L   YR  + F+   L  A     
Sbjct: 300 SKMSKSCGQFLTLSSLQE------RGFQPADFRFFLLSGQYRTQLAFSWDALKTARAARR 353

Query: 336 KWPQ-------------------------------TSTSKGIIDPAVLSALYNDLNTVSA 364
            + +                                ++   ++     +AL +D +T  A
Sbjct: 354 SFVRRVARVVDAARATTGSVRGTSAECAAERVCESRASESELLLTDFRAALEDDFSTPRA 413

Query: 365 IQALHKLARESTKNHDL-LPIFNASAHILGIEVCKEHLNKN----------------ISI 407
           + AL KL R+++    L +     +  +LG+ + +E                        
Sbjct: 414 LSALQKLVRDTSVPPSLCVSALQVADTVLGLGIIQEATASLSAQVPAGDTLPQRPLPSEE 473

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            I +LV+ R    + + F  AD IR+QL+++G  LED          T WK+
Sbjct: 474 WIGQLVRARAHARQTRDFPRADEIRRQLKAEGIELEDT------HLGTIWKR 519


>gi|303390212|ref|XP_003073337.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302483|gb|ADM11977.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 482

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 140/490 (28%), Positives = 235/490 (47%), Gaps = 58/490 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M + +K+YN++ +    F     + ++MY+CGPTVYD  HIG+AR  ++FDV+ R+L   
Sbjct: 3   MDRTLKLYNSISKTSEVFIPRRDNEVKMYICGPTVYDSPHIGHARTYVMFDVIRRVLSD- 61

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y    V +V NITDIDDKII RA +         ++  +T K T++F +D   L    P+
Sbjct: 62  YLRYNVNFVMNITDIDDKIIVRANE------TGVSMDEVTRKYTEEFFEDMKALNVRPPS 115

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
                T+++ ++I  I+ + ++G AYE+   + F+ +   +   +   K ++  + T   
Sbjct: 116 FVTFVTSYVDKIIKFIEKLEVNGFAYESEGSVYFNLNKYQDKHGYPLFK-NKDGINTEGD 174

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K+NP DF+LWK+S   EP +ES WG GRPGWHIECS MSS  LG+  DIH GG+DL
Sbjct: 175 ENKDKRNPCDFVLWKKSKENEPRYESKWGYGRPGWHIECSVMSSDILGEDLDIHAGGIDL 234

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENEIAQ       E     ++H G LN++G KMSKS  NF TI E LE       
Sbjct: 235 AFPHHENEIAQCQAYFMKEPWVKCFLHTGHLNIDGLKMSKSLKNFTTIKEALEV------ 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
                 +R+  L   + + +++  + L  AE +  K                        
Sbjct: 289 -ISPRQLRILFLHHQWNKDMNYEREHLKFAESIEKKIFNFMSVAESMRKNTLEFKTLEDA 347

Query: 338 -PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
             +       +   + +++ ++++T + ++ + ++   +              +      
Sbjct: 348 DREVLGELKNVQKVIHNSILDNIDTPTVMKKIVEMINFTNSRMKDISSSTVLVVKDYIKE 407

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLV-----QERLILLKMKKF----SSADYIRKQLESK 438
              + G+   +   +      I +L+       R +  + + +       D+IR+ ++  
Sbjct: 408 IMEVFGLNEVEAQTSSKEDS-IAQLLGDFRENIRRMARQKEPYSSFLKKCDWIRESIKDH 466

Query: 439 GFILEDYKNP 448
           G+I+ED    
Sbjct: 467 GYIIEDNNEG 476


>gi|295148062|ref|NP_001171155.1| hypothetical protein LOC361184 [Rattus norvegicus]
 gi|183986065|gb|AAI66536.1| RGD1311612 protein [Rattus norvegicus]
          Length = 550

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 158/529 (29%), Positives = 237/529 (44%), Gaps = 97/529 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  K           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTSVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N + + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  IQ II HGHAY  A   + FD  +  + YG                
Sbjct: 147 YLRVTENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKLVNTVPS---ATAEP 203

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++ +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+D
Sbjct: 204 AVDSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGID 263

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 264 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLQT--- 320

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
               +   V RL  L T+YR  ID++   L EA  LL                       
Sbjct: 321 ----FSPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPV 376

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
                         AV +AL ND +T  A+ ++  L   + +                  
Sbjct: 377 GEDVLWERLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVF 436

Query: 380 -DLLPIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++         +GI + K      +     +   +++LV+ RL + +   ++ A    
Sbjct: 437 GAIVAYVEQFFETVGISLAKRQCVSGDSSTVALHCVVDELVRFRLKVRQ---YALATPGA 493

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                              D +R+ L + G  ++D      G   + W+
Sbjct: 494 TGEARKQQLQERQPLLEACDALRQDLMTHGINVKD-----RGHAASTWE 537


>gi|76799584|ref|ZP_00781709.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|76585067|gb|EAO61700.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 351

 Score =  421 bits (1084), Expect = e-115,   Method: Composition-based stats.
 Identities = 123/362 (33%), Positives = 187/362 (51%), Gaps = 28/362 (7%)

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
           ++D   L     T  PR  +++ ++I  ++ ++    AYEAN ++ F  S   +Y   + 
Sbjct: 1   MEDVAALGVKPATKNPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLAN 60

Query: 168 RKIDEQKMGTR---VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
           + +++ ++G       E   K+NP DF LWK +   E  WESPWG+GRPGWHIECS M++
Sbjct: 61  KTLEDLEIGASGRVDGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMAT 120

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             LG   DIHGGG DL FPHH NEIAQS      +  AN W+HNGF+N++  KMSKS GN
Sbjct: 121 EILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGN 179

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
           FIT++++L       +S    VIR  +    YR+P++FT + + +AE+ L     T    
Sbjct: 180 FITVHDML-------KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLP 232

Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHI 391
                          A   A+ +D NT + I  + ++A+     H    +   F     I
Sbjct: 233 IQENANDEELEQFVKAFQGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEI 292

Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            GI   +E L+ +    IE L+++R      + F++AD IR +L  +G  L D K+    
Sbjct: 293 FGIVFQEEVLDAD----IESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRW 348

Query: 452 QR 453
            R
Sbjct: 349 TR 350


>gi|293194132|ref|ZP_06609933.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
 gi|292819774|gb|EFF78785.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
          Length = 454

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 143/431 (33%), Positives = 221/431 (51%), Gaps = 51/431 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y++   ++     + P  + +Y+CG TV    H+G+ R  + FD L R LR    E 
Sbjct: 2   LHLYDSKSARVQPLTPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++ +                +  ++F +    L   APT++PR
Sbjct: 61  -VTYVRNVTDIDDKILHKSAE------AGWDWWAWAYRFEREFTQAYETLGVQAPTYEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK-----MGTR 178
           AT HIP+ + L+Q++I  GHAY + +  + FD  S  +YGS +R+++ + +         
Sbjct: 114 ATGHIPEQLDLVQSLIDAGHAYSDGHGNVYFDVHSQADYGSLTRQRLADMRTTEDDAQID 173

Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W+SPWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 174 EAVEAGKRDPRDFALWKATKPGEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIHG 233

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHENE AQS  A    + A +W+HN ++  +G KMSKS GN ++I  L E  
Sbjct: 234 GGIDLRFPHHENEQAQSHGA--GWEFARLWVHNAWVTTKGEKMSKSLGNVLSIGALTE-- 289

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQ 339
                 +PA  +R A+   H+R  I++  + L  A     K+                 +
Sbjct: 290 -----EYPAVAVRWALSTVHHRSSIEWGAETLPAAHAAWEKFSTFVARAIETAGEAPASE 344

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAH 390
            + +   +  A ++A+ +DLN   A+  LH+  +                   +  +   
Sbjct: 345 IALAPADLPEAFVAAMDDDLNVAGALAVLHEHLKAGNAALAAGDVSGVYREQILVRSMLD 404

Query: 391 ILGIEVCKEHL 401
           +LG++   E  
Sbjct: 405 VLGLDPASEQW 415


>gi|289642333|ref|ZP_06474481.1| cysteinyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
 gi|289507865|gb|EFD28816.1| cysteinyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
          Length = 528

 Score =  421 bits (1083), Expect = e-115,   Method: Composition-based stats.
 Identities = 139/362 (38%), Positives = 195/362 (53%), Gaps = 35/362 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IY+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R L     
Sbjct: 1   MGLHIYDTRTRRLRPFEPLRPGHVSVYVCGPTVQSPPHVGHIRTAVAFDLLRRWLVASGL 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT+V+N+TDIDDKII  A +        +++  + ++ T+ F      +  L PT Q
Sbjct: 61  E--VTFVQNVTDIDDKIIINASR------AGESVWELATRQTRAFDDAYRAVGVLPPTIQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+M+ LI  ++  G+AY     + F  S    YG  S ++ +  +      E 
Sbjct: 113 PRATGHIPEMLALIGRLVDTGYAYPGGGSVWFRVSRFAGYGGLSHQRPEAVQASPECDE- 171

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK + P EP WESPWGRGRPGWHIECSAM+  YLG+VFDIHGGGLDL+F
Sbjct: 172 -GKVDPRDFALWKGAKPGEPFWESPWGRGRPGWHIECSAMAGKYLGEVFDIHGGGLDLVF 230

Query: 243 PHHENEIAQ--------SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           PHHENE AQ                + A  W+H G L   G KMSKS GN   +++  E 
Sbjct: 231 PHHENERAQSASAAHSHGGAGGGAPQMARYWMHVGLLTTGGTKMSKSLGNSFLVSDAFEQ 290

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
            +         V+R  +L  HYR  +++T + L E+     +          I+  V +A
Sbjct: 291 VR-------PQVLRYHLLSAHYRSSLEYTPEGLAESAAAHDR----------IETFVRNA 333

Query: 355 LY 356
           L 
Sbjct: 334 LD 335



 Score = 73.0 bits (178), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 15/105 (14%)

Query: 362 VSAIQALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE------HLNKNIS 406
             A+  L        +               +      +LG++   +       L   ++
Sbjct: 421 SRALAVLFGAVGRGNQVLSKARRRELAGWVDVVRRMLVVLGLDPVSQWPAAGSELRPALN 480

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
             +E ++  R      + ++ AD IR +L + G I+ED       
Sbjct: 481 GVMEIVLDLRSAARARRDYTEADEIRSRLAAGGIIVEDTPEGQRW 525


>gi|109894936|sp|Q2S3T5|SYC_SALRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 516

 Score =  421 bits (1082), Expect = e-115,   Method: Composition-based stats.
 Identities = 143/519 (27%), Positives = 221/519 (42%), Gaps = 69/519 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
               ++YNTL  +    + I+  ++R Y CGPTVY +AHIGN R  +  D++ R      
Sbjct: 3   SPTFRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIG 62

Query: 62  GEKCVTYVRNITDIDDKIIE-------RARQEHPSIPINDAI---SIITSKNTQQFVKDT 111
               VT V NITD+     +         + +       +       +    T+ F++D 
Sbjct: 63  --WDVTNVSNITDVGHLTQDDLVDPGGEDKMQRALEREGERFANIYDLARHYTEAFLEDW 120

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
             L    P  +PRAT H+   +  +  ++   HAY  +  + F   S+ +YG  S     
Sbjct: 121 GALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGNTEA 180

Query: 172 EQKMGTRVP--EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           +Q   T     E   K++P DF LWK        W SPWG G PGWHIECS M   YLG 
Sbjct: 181 QQLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQYLGD 240

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+H GG DLIFPHHE EIAQ+       +  N W+H  FL +EG KMSKS GNF T+ 
Sbjct: 241 RFDLHTGGEDLIFPHHECEIAQNQSLAG-HQVVNYWVHTRFLQVEGEKMSKSKGNFYTVR 299

Query: 290 ELLETKKFGGR---------SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +L+                       +R A++   YR+P +FT+  L  A   + ++   
Sbjct: 300 DLIAPGPDDDHVPDSVREQGGVDPLALRYALMQGQYRKPFNFTLDTLHTAARHVRRYQDA 359

Query: 341 STSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           +                       I    L A+ +DLNT +A  A     +   +   L 
Sbjct: 360 AERVDAALAADADGPDELGGRLRPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTDRLN 419

Query: 383 PI--------FNASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLILLK 421
                      + +  +LG+   +   ++              +S +I+ L+++R     
Sbjct: 420 GATARSARNWLDRTNALLGVVEPEHEADQRTDAGSENGLAPAHLSDSIDTLLEDREAARA 479

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             +++ AD IR  LE+ G  + D  +       T W+++
Sbjct: 480 DGEYARADAIRDTLEALGIEVMDTPD------GTEWERR 512


>gi|110667612|ref|YP_657423.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
 gi|109625359|emb|CAJ51782.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 497

 Score =  420 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 150/500 (30%), Positives = 225/500 (45%), Gaps = 73/500 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + NTL  +  EF+      + +YVCG TV D AH+G+AR  +  D+++R L Y   
Sbjct: 1   MTLSVTNTLTGEREEFEP-RGDEVLLYVCGLTVSDHAHLGHARLWVHADIMHRWLEYQGY 59

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V N TD+++KI+ R         + +  + +    T   ++D   L     T  
Sbjct: 60  --TVRHVENFTDVNEKIVAR----IGEDELGETEATVADHFTNSVIQDMRGLNLKRATVY 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR + HIP +I L+++++  G+AYEAN  + FD ++   YG  S +++DE +  T   E+
Sbjct: 114 PRVSEHIPTIIDLVESLLDDGYAYEANGSVYFDVTAFDGYGDLSNQQLDEMEAQTPADER 173

Query: 183 YHKKNPADFILWKR--STPMEPG-----------------WESPWGRGRPGWHIECSAMS 223
             K++PADF LWK     P +                   W +PWG GRPGWHIECSAMS
Sbjct: 174 AEKRHPADFALWKAGGVKPDDLNEHRSEELDQLETTHGQTWNAPWGEGRPGWHIECSAMS 233

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             +L +  DIH GG DL+FPHHENE+AQS  A   ++ A  W+H G L   G KMS S G
Sbjct: 234 MDHLDETLDIHVGGRDLMFPHHENEVAQSEAAT-DQQFARYWLHVGLLQSAGDKMSSSIG 292

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--- 340
           N +TI + L+            VIR+  L T YR         L EA     +  +    
Sbjct: 293 NILTIKQALDEHGV-------NVIRMFYLATAYRSEQTLGQSELAEATERWDRLNRAYEM 345

Query: 341 -------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD- 380
                               +S      +  SA+ ND N   AI +L KLA    ++ D 
Sbjct: 346 AVDASNSTDAYAIVEDESLRSSVSETKSSFTSAMNNDFNVREAIASLLKLATSVNRHLDS 405

Query: 381 -----------LLPIFNAS-AHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKK 424
                       +  F A    + G++   +             IE ++  R    +   
Sbjct: 406 QERYDYRGLYMAIEAFEALGGEVCGLKFGDQPTGDGTVEIAEELIELILDVRETEREAGN 465

Query: 425 FSSADYIRKQLESKGFILED 444
           +  AD +R  L+  G  ++D
Sbjct: 466 YDRADELRDSLDEIGIEVQD 485


>gi|109121280|ref|XP_001083935.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           isoform 3 [Macaca mulatta]
          Length = 563

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 153/529 (28%), Positives = 233/529 (44%), Gaps = 98/529 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 48  ETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 107

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT 
Sbjct: 108 GCN-IVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTV 160

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II  GHAY  A   + FD  S  + YG                
Sbjct: 161 YLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLVGVVPGPVG----E 216

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+D
Sbjct: 217 PADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGID 276

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + E+  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 277 LAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT--- 333

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKWPQTSTSKGII 347
               +   V R   L + YR  ID++   +  A+  L            + +   + G +
Sbjct: 334 ----FSPDVFRFFCLRSSYRSAIDYSDSAMLHAQQQLLALGSFLEDARAYMKGQLACGSV 389

Query: 348 DP------------AVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
                         AV  AL +D +T   + A+  LA                       
Sbjct: 390 REVMLWERLASTRSAVKEALADDFDTPRVVDAILGLAHHGNGQLRAASKEPGVPRSPAVF 449

Query: 380 -DLLPIFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++  F      +GI +  +           +   +E+LV+ R  + +   F+ A    
Sbjct: 450 GAIISYFEQFFETVGISLGNQQCVSGDGSEATLRGVVEELVRFRQKVRQ---FALAKAEA 506

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                              D +R+ L + G  ++D  +  +      W+
Sbjct: 507 TGEARRQQLLERQPLLEACDTLRQDLTAHGISIKDRNSTTS-----TWE 550


>gi|320095413|ref|ZP_08027091.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319977656|gb|EFW09321.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 437

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 141/431 (32%), Positives = 215/431 (49%), Gaps = 51/431 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++    +   + + P  + +Y+CG TV    H+G+ R  + FD L R LR    E 
Sbjct: 1   MRLYDSKTASVRPLEPVVPGEVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRN+TDIDDKI+ ++ Q                +  ++F      L   APT++PR
Sbjct: 60  -VTYVRNVTDIDDKILTKSAQ------AGWDWWAWAYRYEREFTSAYDALGVQAPTYEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK-----MGTR 178
           AT HIP  I L++ ++  GHAY+     + FD  S P+YGS +R+++ + +         
Sbjct: 113 ATGHIPDQIDLVRRLVERGHAYDDGAGNVYFDVHSQPDYGSLTRQRLADMRTTEDEAQID 172

Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +  K++P DF LWK + P EP    W+SPWGRGRPGWH+ECSAMS  YLG  FDIHG
Sbjct: 173 AAVEAGKRDPRDFALWKATKPGEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIHG 232

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHENE AQS  A      A +W+HN ++  +G KMSKS GN +++  L    
Sbjct: 233 GGIDLRFPHHENEQAQSHGA--GWAFARMWVHNAWVTTKGEKMSKSLGNVLSLEAL---- 286

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQ 339
               R  PA  +R A+   H+R  I++  + L  A    +++                 +
Sbjct: 287 ---TRDHPAVAVRWALSTVHHRSAIEWGPETLDNAASAWARFSGFVSRAIEAVGEAGAEE 343

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLP------IFNASAH 390
            +     +  A   A+ +DLN   A+   H+  +       + D         +  +   
Sbjct: 344 VAIPADGLPAAFREAMDDDLNVAGALAVAHEHLKAGNVALGSGDAEAVRREQVLVRSMLD 403

Query: 391 ILGIEVCKEHL 401
           +LG++      
Sbjct: 404 VLGLDPASPQW 414


>gi|292609692|ref|XP_682732.4| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 566

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 159/521 (30%), Positives = 231/521 (44%), Gaps = 95/521 (18%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           YN+L +K              Y CGPTVYD AH+G+A   + FD+L R+L   +G   V 
Sbjct: 57  YNSLTKKKEPLILSQEKIATWYSCGPTVYDHAHLGHACSYVRFDILQRILSRLFGIN-VI 115

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +V  ITDIDDKII+R+ +E      N +   +   + ++F KD   L  L P    R T 
Sbjct: 116 HVMVITDIDDKIIQRSLEE------NISPITLARMHEEEFKKDMLALRVLPPVVYMRVTE 169

Query: 128 HIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKYHK 185
           +IPQ+I  I+ II +GHAY  +   + F+T SI   YG       +  + G +      K
Sbjct: 170 NIPQIIAFIERIIGNGHAYVTSQGNVYFNTKSISHRYGKLVNLGGNAGEQGVQ-----DK 224

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           +N  DF LWK S P EP WESPWG+GRPGWHIECS ++S   G   DIH GG+DL FPHH
Sbjct: 225 ENSRDFALWKASKPFEPYWESPWGQGRPGWHIECSTIASSVFGHQLDIHSGGIDLAFPHH 284

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWP 303
           ENEIAQS    + E+  N ++H+G L+L+G   KMSKS  N++TI + L        S+ 
Sbjct: 285 ENEIAQSEAYHQCEQWGNYFLHSGHLHLKGSVEKMSKSLKNYVTIKDFLA-------SYT 337

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------STSKGIID 348
           A   RL  L+T YR  ID++   + EA+  LS                       +G + 
Sbjct: 338 ANEFRLFCLLTKYRSAIDYSDASMNEAQSTLSTISAFFHNAQAYMQGHMQCQPVEEGFLW 397

Query: 349 P-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN--------------- 386
                   +V   L +D +T  A+ A+  L              +               
Sbjct: 398 ERLSNTQTSVHKMLADDFDTPKAVDAIMSLIYHGNCQLQPATKVDGPRSPAVFGAIMSYV 457

Query: 387 -ASAHILGIEVCKEHL----NKNISIAIEKLVQERLILLK----------------MKK- 424
                + G+++  +      +  ++  +E+LV  R  + K                 K  
Sbjct: 458 MEIMSVFGVDLSDKTEVQVSSGVLNNVVEELVHFRSEVRKFALSVEDQAPQESQTGNKNQ 517

Query: 425 -------------FSSADYIRKQLESKGFILEDYKNPDNGQ 452
                          + D +R  L   G  ++D       +
Sbjct: 518 KRHHQPDRLHLSLLKACDALRNNLAPLGVHIKDRGTNSTWE 558


>gi|163846330|ref|YP_001634374.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222524094|ref|YP_002568565.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163667619|gb|ABY33985.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222447973|gb|ACM52239.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 398

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 148/410 (36%), Positives = 204/410 (49%), Gaps = 35/410 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL R    F       + +YVCG T YD  H+G+AR  IVFDVL R L++     
Sbjct: 1   MQLFSTLSRTRETFTVPTDRPVTLYVCGVTPYDTTHMGHARTFIVFDVLVRYLQWQGA-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N+TD+DD + ERAR++            +  +  +Q   D   L  L PT  PR
Sbjct: 59  TVRYCQNVTDVDDPLFERARRDGVQW------DELAERQIRQLRADCADLNILPPTFFPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVP 180
            +  +  MI +I+ +I  GHAY  +  + F   + P++G  +R    E           P
Sbjct: 113 VSEEVGTMIPIIERLIELGHAYVVDGNVYFSIQTDPDFGRMARMGYSELLAIANQRGNNP 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LW+R  P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DL
Sbjct: 173 HDPNKRDPLDFVLWQRGNPDEPKWESPWGLGRPGWHIECSAMSQRYLGEQIDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHH  EIAQS  A      A  W+H G + L+G KMSKS GN +   + L       R
Sbjct: 233 IFPHHSCEIAQSESATGKRPFARFWMHVGLVWLDGEKMSKSLGNLVFARDAL-------R 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRL----TEAEILLSKWPQTSTSKGIID-----PAV 351
                 IR  +L  HYRE  D+    L      A  L      T  S   +D       V
Sbjct: 286 EHHPDAIRWYLLSEHYREDFDYRRDALVRFEQYAADLRQALSVTGGSHSPLDVSRGREDV 345

Query: 352 LSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFNASAHILGI 394
           ++A+ +DL+T + +  LH +       A+E         +    A +LG 
Sbjct: 346 IAAMNDDLDTPTVLAVLHTMAGMIIDGAKEGRDVSSAQAVVRDLALMLGF 395


>gi|328952801|ref|YP_004370135.1| cysteine synthase [Desulfobacca acetoxidans DSM 11109]
 gi|328453125|gb|AEB08954.1| cysteine synthase [Desulfobacca acetoxidans DSM 11109]
          Length = 770

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 133/491 (27%), Positives = 214/491 (43%), Gaps = 56/491 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +  +NT  R    F         +Y  GPT+  +  + +AR ++V D+L R L Y  
Sbjct: 304 RPTLCFFNTEGRSKQAFLPQHLGQASIYTDGPTMDGYLTLTDARRLMVADLLRRYLEYRG 363

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V  V N+TD+DD+ I  A      +     ++  T +   +F  D   L       
Sbjct: 364 YQ--VKQVVNLTDLDDRTIRGA------VAAGLPLNAFTQQYIDEFFADIDALRLKRAEV 415

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            P+AT+HI  M+ L++ ++  G+AYE    + FD S    YG  S   +++ ++G  V  
Sbjct: 416 YPKATDHIDDMVALVKRLLEKGYAYEKLRSVYFDISRFRGYGKLSHVNLEKIRLGKTVDL 475

Query: 181 EKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           + Y K NP DF L KR+   E      + + WG  RPGWH+EC+AM+  +LG+ FDI  G
Sbjct: 476 DDYEKDNPCDFTLLKRAKLGELKLGLYYPTEWGNVRPGWHLECAAMALKHLGESFDIVTG 535

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G +LIFPHHEN IA        +  A  W+HN  +        +S G   T+  L +T  
Sbjct: 536 GSNLIFPHHENVIAICEAVSG-KPLARYWLHNESVLGVMAAAEESEGP-TTVRRLFQTGV 593

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSKWPQTSTSK----- 344
           +G        +R  +L THYR+ +  + + L  A          L +  + +  K     
Sbjct: 594 WGVD------LRFLLLATHYRKTLHLSNEALDAARRSRRRLDLFLERLNRVNGGKPEGDL 647

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
                 ++    +AL +DLN   A+ AL    RE             +   ++  F    
Sbjct: 648 PERLARLESEFTAALDDDLNIAGALAALFNFQREINIWMDRGRLAEAEAEAIIDQFRQFD 707

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LG+             AIE+ ++ER      + F+ AD IR++L   G  + D     
Sbjct: 708 RVLGVMNFP--TPAPTDAAIEEKLREREEARGRQDFARADEIRQELAVLGIEVLDTPTGP 765

Query: 450 NGQRMTRWKQK 460
                  W+++
Sbjct: 766 A------WRRR 770


>gi|269926313|ref|YP_003322936.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789973|gb|ACZ42114.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 392

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 139/405 (34%), Positives = 205/405 (50%), Gaps = 31/405 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL  +I      +   + +YVCG T YD  H+G+A   + FDVL R L     + 
Sbjct: 1   MKLYDTLTNQIKPLA-GEDGRVSVYVCGITPYDTTHLGHAFLYVTFDVLIRYLESTGYQ- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N+TDIDD I+ +A++      +N     +  + T +F+ D   L    P H P 
Sbjct: 59  -VIYTQNVTDIDDDILRKAKE------LNMFYLDLAERETNRFLSDLRALNVRMPDHYPH 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT  I  M+ ++  +I  GHAY  +  + FD  +   +G  S+   +E     R     P
Sbjct: 112 ATQEIDGMVEIVSKLIDKGHAYVRDGNVYFDIDTYEGFGQLSKLSREEMIAIARERGGNP 171

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   + +P DF+LW+RS   EP W+SPW +GRPGWHIECS MS  YLG    IHGGG DL
Sbjct: 172 EDPLRDDPLDFLLWQRSAEGEPAWDSPWSKGRPGWHIECSTMSLKYLGASLTIHGGGADL 231

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE E AQS C   I      W+H G L  +G KMSKS GN + ++ LL       +
Sbjct: 232 IFPHHECERAQSECYTGISPFVKHWMHVGMLRYQGEKMSKSLGNLVLVDRLL-------Q 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------V 351
           ++    +RL ++  HY+E  ++    + EAE L  K    ++     D            
Sbjct: 285 NYSPDAVRLVLISHHYQESWEYQDSMIEEAEKLAQKIRIAASLAPAHDAEFQDTYEFDLF 344

Query: 352 LSALYNDLNTVSAIQALHKLARES--TKNHDLLPIFNASAHILGI 394
             A+ ++LNT  A++ L  L+ E     +++   +    A  LG+
Sbjct: 345 RQAMEDNLNTPRAVELLRSLSEEIIQNDDNNKACVLRQIATTLGL 389


>gi|296270626|ref|YP_003653258.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093413|gb|ADG89365.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 451

 Score =  418 bits (1075), Expect = e-114,   Method: Composition-based stats.
 Identities = 146/432 (33%), Positives = 221/432 (51%), Gaps = 38/432 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T  R + EF    P  + +Y+CGPTV    H G  R  I FD+L R L++   
Sbjct: 1   MGLRLYDTFHRAVREFSPRIPGRVSIYLCGPTVVTPPHAGQMRSQIDFDILQRWLKFRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V   RN+TD++DKII R+  E            IT    + F +    L CL P+ +
Sbjct: 61  D--VLLCRNVTDVEDKIIGRSISEGTPWWR------ITDSVYRMFDRAFADLGCLPPSVE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI +I+ ++  GHAYE + ++ F  +S P YG+ S ++++  ++  R    
Sbjct: 113 PRATGHIPEMIEMIEELLARGHAYEHDGDVYFSVASYPRYGALSGQRMERLRVTERPA-- 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++P DF LWKR    EP W+SPWG+GRPGWH+ECSAM+  YLG  FDIHGGG +LIF
Sbjct: 171 RGKRDPRDFTLWKRVDLGEPVWDSPWGKGRPGWHLECSAMARRYLGPAFDIHGGGSNLIF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE+AQS      ++ A  W+HNG +   G K+ K  G+   +  LL   +      
Sbjct: 231 PHHENELAQSRAL--GDEFARFWVHNGQVTYGGEKIRKRLGDPFAVPALLGRVR------ 282

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYN 357
               +R  +   HYR  ++F++  L EA     +  +     G     ++      A+ +
Sbjct: 283 -PVELRYYLAAAHYRSRLEFSLAALEEAAAAYRRIERFVLRVGADRSPVLPHRFAEAMDD 341

Query: 358 DLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLN-----K 403
           DLN   A+  +H    E               +     A   +LG++   EH       +
Sbjct: 342 DLNVPRALSLVHAAVAEGNAALVTRDHVAAARICGSVRAMLDVLGLDPLSEHWAGGEPLE 401

Query: 404 NISIAIEKLVQE 415
            I+ A+ +LV+E
Sbjct: 402 EIAAAVLRLVRE 413


>gi|221633882|ref|YP_002523108.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221156184|gb|ACM05311.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 407

 Score =  418 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 152/417 (36%), Positives = 214/417 (51%), Gaps = 35/417 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + ++++N+L   I  F  +D   +R+YVCG T YD  H+G+A   +VFD+L R+ +Y+ 
Sbjct: 6   SEAVRLFNSLTGTIEPFAPLDGRTVRLYVCGVTPYDTTHMGHAMTYLVFDILNRICQYHG 65

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITDIDD I+ +ARQ      + +    +  +  +QF +D   L  L P+ 
Sbjct: 66  --WRVKYVQNITDIDDDILRKARQ------VGEPWDRLGDRYIRQFQEDLNALNVLFPSV 117

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
            PRAT  IP MI +IQ ++  G AY  +  + F  +S P+YG   R   DE    +    
Sbjct: 118 FPRATEEIPLMIEIIQKLLERGAAYMRDGNVYFRVASDPDYGHLCRCSRDEMIRLSAERG 177

Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             P+   K++P DF+LW+ + P EP W+SPWG GRPGWHIECSAM+  YLG   D+HGGG
Sbjct: 178 ADPQDPRKEDPLDFLLWQAAQPGEPTWDSPWGPGRPGWHIECSAMAMKYLGPQIDVHGGG 237

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLI+PHHE+EIAQS         A  W+H   +  EG KMSKS GN + + + L     
Sbjct: 238 YDLIYPHHESEIAQSESYTGTSPFARFWVHVAMVEYEGAKMSKSLGNLVLVRDTL----- 292

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPAVLSALY 356
             R      IRL +L  HYR P  +        E L+ +  +  T+ G    P  L+ L 
Sbjct: 293 --RRHTGDAIRLYLLSHHYRTPFAYEDDGPARFEPLVQRLREAVTAPGGSGSPLDLAPLR 350

Query: 357 N--------DLNTVSAIQALHK-------LARESTKNHDLLPIFNASAHILGIEVCK 398
           +        DL+T  AIQ L          ARE                +LG+ V +
Sbjct: 351 DQLAAALADDLDTPRAIQLLADAAERLLRAAREGQAIEQAREQLREMGSLLGLTVTR 407


>gi|238923819|ref|YP_002937335.1| cysteinyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
 gi|238875494|gb|ACR75201.1| cysteinyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
          Length = 475

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 156/482 (32%), Positives = 232/482 (48%), Gaps = 39/482 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL R+I          I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V  V NITD+     D      +    +   + ++  +  + T  F KD T +  
Sbjct: 61  GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSVMEVAKEYTDAFFKDFTAVHN 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKM 175
             P     ATN IP+ I++++ +I  G+AY A   + FDTS + +Y  FS     ++ ++
Sbjct: 119 RMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVEKEQLQV 178

Query: 176 GTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S  +LG+ 
Sbjct: 179 GVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISMKHLGEY 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D IFPHH NEIAQS            W H   LN    KMSKS G  +T++ 
Sbjct: 239 VDIHCGGVDNIFPHHTNEIAQSESYLG-HDWCKYWFHVNHLNDRAGKMSKSKGAILTVSV 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGII 347
           L E      + +     R   L +HYR+P++F+   L  A    +K  +       +G I
Sbjct: 298 LQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAELKDEGDI 351

Query: 348 DP--------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           D             A+ NDLNT  AI  ++ + +    +   L + +    +L + + + 
Sbjct: 352 DETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLDLGLRES 411

Query: 400 -----HLNKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                  + ++   +E  + +    R    K K F++AD IR +L ++G  ++D +    
Sbjct: 412 GKALLEASSSVDSELEAFINDKIAERAAAKKAKDFATADAIRDELLARGVAIKDTREGVK 471

Query: 451 GQ 452
            +
Sbjct: 472 WE 473


>gi|315638875|ref|ZP_07894047.1| cysteine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481093|gb|EFU71725.1| cysteine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 454

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 150/463 (32%), Positives = 225/463 (48%), Gaps = 54/463 (11%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
             I MY+CGPTVYD AH+G+AR  I FD+L R+L      + + + RN TDIDDKI+++ 
Sbjct: 18  GVITMYLCGPTVYDNAHLGHARSSICFDLLRRVLLSLG--RKLYFARNYTDIDDKILKKM 75

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           ++        +++  IT K    + +D   L  L P  +P+AT +I QMI LI ++   G
Sbjct: 76  QES------GESLEQITQKYIAHYERDMKNLRVLEPDLKPKATEYIKQMIELILHLQRQG 129

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
             Y   + I FDTS    Y S S+R   + +  TR+  +  KKN +DF+LWK     E  
Sbjct: 130 FTYTLEDGIYFDTSKDKEYLSLSKRGFMDNQ--TRLIAQKEKKNESDFVLWKF---DEGF 184

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           + +P+G+GRPGWH EC AM         DIH GG+DL FPHHENE AQ  CA   +  A+
Sbjct: 185 YAAPFGKGRPGWHSECVAMIEALFKDSLDIHAGGVDLFFPHHENEAAQCRCAFN-KNLAS 243

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+HNGF+N+ G KMSKS  N   I + L       + +    +R  ++  HYR   +++
Sbjct: 244 HWLHNGFVNINGEKMSKSLNNSFFIKDAL-------KEFSGEALRFYLMSVHYRAHFNYS 296

Query: 324 VQRLTEAEILLSKWPQTSTSKG-------------IIDPAVLSALYNDLNTVSAIQALHK 370
           ++ L+  +  L K  +                    +   +L AL +DLN   A+  L +
Sbjct: 297 LEDLSLCKKRLDKLYRLKKRLDLNSLEDKPKKCERELSLTILQALQDDLNISKALALLDE 356

Query: 371 LARESTKNHD--------LLPIFNASAHILG------IEVCKEHLNKNISIAIEKLVQER 416
               +    D        L   F   A I G      I   ++  ++     IE  + +R
Sbjct: 357 FIANANLKLDENKALKEGLREDFKELAFIFGVGFEDVILYFQQGFSEEQIAWIETQITKR 416

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               K K ++ AD +R+ L   G +L D        + T W++
Sbjct: 417 SEAKKAKDYALADKLRQDLAEFGVVLLDT------AQGTIWER 453


>gi|291528005|emb|CBK93591.1| cysteinyl-tRNA synthetase [Eubacterium rectale M104/1]
          Length = 475

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 157/482 (32%), Positives = 231/482 (47%), Gaps = 39/482 (8%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+   K YNTL R+I          I MY CGPTVY FAHIGN R  I+ DVL + LRY 
Sbjct: 1   MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60

Query: 61  YGEKCVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
             +  V  V NITD+     D      +    +   + ++  +  + T  F KD T +  
Sbjct: 61  GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSVMEVAKEYTDAFFKDFTAVHN 118

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKM 175
             P     ATN IP+ I++++ +I  G+AY A   + FDTS + +Y  FS     ++ ++
Sbjct: 119 RMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVEKEQLQV 178

Query: 176 GTR--VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKV 230
           G R  V E  +KKN  DF+LW   +  E     W+SPWG G PGWHIECS +S  +LG+ 
Sbjct: 179 GVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISMKHLGEY 238

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG+D IFPHH NEIAQS            W H   LN    KMSKS G  +T++ 
Sbjct: 239 VDIHCGGVDNIFPHHTNEIAQSESYLG-HDWCKYWFHVNHLNDRAGKMSKSKGAILTVSV 297

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGII 347
           L E      + +     R   L +HYR+P++F+   L  A    +K  +       +G I
Sbjct: 298 LQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAELKDEGDI 351

Query: 348 DP--------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           D             A+ NDLNT  AI  ++ + +    +   L + +    +L + + + 
Sbjct: 352 DETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLDLGLRES 411

Query: 400 -----HLNKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                    ++   +E  + +    R    K K F++AD IR +L +KG  ++D +    
Sbjct: 412 GKALLEAASSVDSELEAFINDKIAERAAAKKAKDFATADAIRDELLAKGVAIKDTREGVK 471

Query: 451 GQ 452
            +
Sbjct: 472 WE 473


>gi|332031259|gb|EGI70793.1| Cysteinyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 518

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 160/509 (31%), Positives = 238/509 (46%), Gaps = 72/509 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++ IYN + +          + ++ Y+CGPTVYD AHIG+A   I  D++ R+L  Y+
Sbjct: 31  QTEVSIYNLITKCKVPLILKTQNILKWYICGPTVYDSAHIGHATTYIKSDIIRRILSDYF 90

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V  V  ITDIDDKII R+ +             ++     +F  D  +L    P  
Sbjct: 91  -NIDVLLVMGITDIDDKIIRRSNES------GKDFKTLSRHFETEFFADMNKLNIREPYL 143

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           + R T++IPQ+I  I+ +I  G  Y A +  + F+TS    YG  S   +D       V 
Sbjct: 144 RCRVTDYIPQIIQFIEKLIAKGDGYVAPDGSVYFNTSKYNKYGKLSTLVLDTVNDQNFV- 202

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK+  DF LWK +   EP W+SPW  GRPGWHIECSA++S   G   DIH GG+DL
Sbjct: 203 ---GKKSALDFALWKAAKENEPSWKSPWSYGRPGWHIECSAIASTVFGNSIDIHSGGIDL 259

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKFGG 299
            FPHHENE AQSCC   +++  N W+H G L+L+G  KMSKS  N I+I + LE      
Sbjct: 260 AFPHHENEEAQSCCYHDVDQWVNYWLHCGHLSLKGDVKMSKSLKNTISIQDYLE------ 313

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDP 349
            ++ A  +R+  L++HYR  I+F+ + +  A  +  K                  G ID 
Sbjct: 314 -NYSANNLRMLCLLSHYRNGIEFSDEVIQTAMSVTKKIDNFINDCDNYVAGKFKTGEIDE 372

Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPI 384
                        V SAL +D +T  A+ A+  L     K                +  +
Sbjct: 373 NLLYTTLHDTRSKVYSALADDFDTSKAMHAIINLVGIGNKMFHQDNVTSRSNNVSVVAAV 432

Query: 385 FNASAHILG-IEVCKEHLNKNISIAIEKLVQ--------ERLILLKM--KK---FSSADY 430
            N  ++IL    + +   +   +  IE ++          R+  L+   K        D 
Sbjct: 433 SNYLSNILSKFGISRSTKSTVENRQIEDIIDHFLNFRKTVRIRALEQNPKDTILLKECDN 492

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +RK L + G +++D KN ++      WKQ
Sbjct: 493 VRKCLYTCGIMVKDQKNDNSSW---SWKQ 518


>gi|85374564|ref|YP_458626.1| cysteinyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787647|gb|ABC63829.1| cysteinyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 500

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 159/513 (30%), Positives = 236/513 (46%), Gaps = 72/513 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K++N+L R + EFQ I P   R+Y CGPTVY++ HIGN R  I  D L R L +  
Sbjct: 3   TTPLKLFNSLTRSLEEFQPIHPGEARVYTCGPTVYNYQHIGNMRAYIFADTLGRTLSWKG 62

Query: 62  GEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  + +V NITD+     +      + E  +     +   I     Q F  D  RL   
Sbjct: 63  FD--LKHVINITDVGHLTSDADAGDDKMEKAAAREGKSAWDIARYYQQVFEADLDRLNIR 120

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P H PRAT+++  MI   ++I    H YE ++ + FD S++P YG  +R   DE +   
Sbjct: 121 KPEH-PRATDYVESMIAWAKSIEAK-HCYELDSGLYFDVSTVPEYGRLARAVTDEGE--G 176

Query: 178 RVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+ E   K+N ADF +W+++ P E     W+SPWG+G PGWH+ECS MS+  LG  FDIH
Sbjct: 177 RIDEVEGKRNAADFAIWRKTPPGETRQMEWDSPWGKGAPGWHLECSVMSAELLGHPFDIH 236

Query: 235 GGGLDLIFPHHENEIAQSCCADRI-EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GG+D    HH NEIAQ+   +   +  A IW+HN FL     KMSKS+G F+T+  L++
Sbjct: 237 TGGIDHREIHHPNEIAQNQAHNCSPDSGAKIWMHNNFLIDRRGKMSKSSGEFLTLQALVD 296

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------- 336
                 R +     R+  L  HYR  ++FT + L  A + L +                 
Sbjct: 297 ------RGFHPLAYRMLCLQAHYRSELEFTWEGLEAALVRLKRMVMALETLKARHAELVS 350

Query: 337 --------WPQTST------------SKGIIDPAVLSALYNDLNTVSAIQALHK-LARES 375
                   W Q                 G       +A+ +DLNT  ++ A+   LA + 
Sbjct: 351 ASMPNSKPWAQMEAWTLKQVQGDDWGKLGPAIEKFGTAIADDLNTAISLTAMEDLLATKK 410

Query: 376 TKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFS 426
                 L + +A   +LG ++          +    +     IE    ER      K F+
Sbjct: 411 IDPAKKLVLASAFDAVLGFDLLNLSRTDLRTRPATAEISEAEIEAAFAERKEARAAKDFA 470

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            +D IR  L +KG  + D  +P   +    WK+
Sbjct: 471 RSDAIRDDLAAKGVEVMDG-DPLGWE----WKR 498


>gi|320533525|ref|ZP_08034187.1| cysteinyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
 gi|320134258|gb|EFW26544.1| cysteinyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
           F0337]
          Length = 498

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 147/455 (32%), Positives = 221/455 (48%), Gaps = 50/455 (10%)

Query: 3   KKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +++Y++  R I        P  + +Y+CG TV    HIG+ R  I FDVL R L    
Sbjct: 26  PALRLYDSAARAIVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLERSG 85

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V  +RN+TDIDDKI+ ++    P +P          +  ++F      L   APT+
Sbjct: 86  QE--VRLIRNVTDIDDKILSKSAAAEPPVPW----WAWAQRFEREFDAAYRALGVAAPTY 139

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQ-----KM 175
           +PRAT HIP+MI L+Q ++  GHAY      + +D  S+P+YGS + +++++      + 
Sbjct: 140 EPRATGHIPEMIDLVQRLLDAGHAYIGESGNVYYDVRSLPDYGSLTNQRLEDLATTEDES 199

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                 +  K++P DF LWK + P EP    W +PWGRGRPGWH+ECSAMS  YLG+ FD
Sbjct: 200 QLDDDVEADKRDPRDFALWKAAKPTEPADAAWGAPWGRGRPGWHLECSAMSRRYLGETFD 259

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IHGGG+DL FPHHENE AQS  A      A  W+HN ++ ++G KMSKS GN + + ELL
Sbjct: 260 IHGGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTIKGEKMSKSLGNSLVVAELL 317

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------- 337
                  + + A V+RLA+   H+R  ++F+ + L +A  L  +                
Sbjct: 318 -------KRYDAAVLRLALGTVHHRSTVEFSDETLADAAALWERLSGAILRAYEFCDDGG 370

Query: 338 ------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                 P        +     +A+  DLN   A+  +H   +        +   +    +
Sbjct: 371 TNPVEAPAEQVRARALPAEFTAAMDEDLNLAGAMAVVHATLKALNVALSRIDTVDK--EV 428

Query: 392 L--GIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           L   ++   E          E ++   L L     
Sbjct: 429 LRGEVKPLGETHVTASESLGETVIGLVLDLRAQLD 463


>gi|296188978|ref|XP_002742588.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           [Callithrix jacchus]
          Length = 565

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 151/529 (28%), Positives = 235/529 (44%), Gaps = 98/529 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 48  DTGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 107

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT 
Sbjct: 108 GCN-IVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTV 160

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ++  I+ II  GHAY  A   + FD  S  + YG                
Sbjct: 161 YLRVTENIPQIVSFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLVSVAPGP----AGE 216

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++P+DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+D
Sbjct: 217 PADSDKRHPSDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGID 276

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + E+  N ++H+G L+++G   KMSKS  N++TI + L+T   
Sbjct: 277 LAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHMKGKEEKMSKSLKNYVTIKDFLKT--- 333

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLSKWPQTSTS 343
               +   + RL  L + YR  ID++                 L +A   +     + + 
Sbjct: 334 ----FSPDIFRLFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLASGSV 389

Query: 344 KGII--------DPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
           + ++          AV +AL +D +T S + A+  L                        
Sbjct: 390 REVMLWERLSSTKRAVRAALADDFDTPSVLDAILGLVHHGNGELRATPKEPGGPRSPAVF 449

Query: 380 -DLLPIFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++  F      +GI +  +           +   +++LV+ R  + +   F+ A    
Sbjct: 450 GAIISYFEQFFETVGISLANQQCVSGDGGEATLRGVVDELVRFRQQVRQ---FALATPEA 506

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                              D +R+ L + G  ++D       Q  + W+
Sbjct: 507 TGEAQRQQRLERQPLLEACDTLRRGLTAHGINIKD-----RSQTTSTWE 550


>gi|256371123|ref|YP_003108947.1| cysteinyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007707|gb|ACU53274.1| cysteinyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 446

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 150/461 (32%), Positives = 223/461 (48%), Gaps = 35/461 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R++ +     P  + +YVCGPTVYD  H+G+ R  +VFD L R L       
Sbjct: 2   LRLYDTARRELIQLTPGTPEQVTVYVCGPTVYDDPHLGHGRLAVVFDTLRRTLERLVA-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITDIDDKI++RA +E            I  +   ++      L    PT  P 
Sbjct: 60  PVRFVSNITDIDDKIVDRAARE------GVTPPAIAERYESRWWDAIDALGVRRPTVAPH 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A+  +  M+ LI+ ++  GHAY   N +      +P+YG    + ++E + G RV     
Sbjct: 114 ASEWLDAMVALIERLVDRGHAYMTKNGVYLSVDHVPDYGLLKHQALEELRAGARVEVDDA 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWK       G+ +  G GRPGWH EC AMS+  LG  FD+HGGG+DL+FPH
Sbjct: 174 KRSPLDFALWKTVESDAYGFATSLGYGRPGWHTECVAMSTELLGSTFDLHGGGMDLVFPH 233

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+   D     A  W+HN F+ LEG KMSKS GN   +++ + +          
Sbjct: 234 HENERAQASLLDMG--FAQHWVHNAFVELEGEKMSKSLGNTFGLHDAIASAG-------G 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIIDPAVLSALYND 358
            V+RLA L  HYR P++ T   L +A   L++            ++        +AL +D
Sbjct: 285 RVVRLAYLRAHYRSPVELTTTTLEQAAAQLARLDSQAGAGDARAAEPADLEEFDAALADD 344

Query: 359 LNTV---------SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
           L+T          +       LA ES   +       A    LG+ V       +I   +
Sbjct: 345 LDTPAALAVMAEAARAARSAALAGESALANRRRAALAAMLETLGLPVPP---RASIPSEV 401

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
             LV ER    + + F+ AD +R ++ + G+ + D  N   
Sbjct: 402 TALVAERDHAKRDRDFARADALRAEIAALGYQVRDTPNGPE 442


>gi|66475306|ref|XP_627469.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|32398684|emb|CAD98644.1| cysteinyl-tRNA-synthetase, possible [Cryptosporidium parvum]
 gi|46229332|gb|EAK90181.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
 gi|323508907|dbj|BAJ77346.1| cgd6_960 [Cryptosporidium parvum]
 gi|323510143|dbj|BAJ77965.1| cgd6_960 [Cryptosporidium parvum]
          Length = 581

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 157/550 (28%), Positives = 231/550 (42%), Gaps = 116/550 (21%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + + N++    TEF  ++   +  Y CGPTVYD AH+G+AR  + FD++ R+L  Y+
Sbjct: 37  STGLMLNNSMTGGRTEFIPVNGRRVNWYACGPTVYDSAHLGHARNYVTFDIIRRVLEDYF 96

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G      V NITDIDDKII+R+ ++     ++     +  +   +F  D   L    P  
Sbjct: 97  GYDVYL-VMNITDIDDKIIKRSNEQKRENFLD-----LAREFELEFFDDMKALNVKMPDV 150

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDE---- 172
             R +  IP++I  I  II  G AYE+   + FD  S        YG    + + +    
Sbjct: 151 VTRVSEFIPEIIDFISTIISRGFAYESEGSVYFDVESFRADEKHVYGRMEPKSVADVNRV 210

Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G        KK+P DF LWK++ P EP W+SPWG+GRPGWHIECS M+S+ LG   
Sbjct: 211 LEGEGELGEHLKDKKSPLDFALWKKAKPEEPCWDSPWGKGRPGWHIECSVMASNTLGFPI 270

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++ G KMSKS  NF TI E+
Sbjct: 271 DIHSGGIDLRFPHHDNELAQSEAHYDQAQWVNYFLHSGHLHIHGSKMSKSLKNFTTIQEI 330

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR-LTEA--------------EILLSK 336
           L       +      IR+  L+  +  P++++ +  L EA              +  L  
Sbjct: 331 L-------KENSPRHIRMLFLLHKWDAPMNYSPETSLQEAIAVDKTFVNFFANVKARLRT 383

Query: 337 WPQTSTSKGIIDPA------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
               ++ K  I+              +     +++NT   IQAL  L   +    +L   
Sbjct: 384 SYLKNSQKHDIEEEKLRLAIESSSEKIDEFFKDNINTPEVIQALQSLVTVANSYMNLKSD 443

Query: 385 --------------FNASAHILGI-EVCKEHLN-------KNISIAIEKLVQE------- 415
                               ILG+     E LN          +  +E+L  E       
Sbjct: 444 DQIVGNILRRCATYVYKILSILGLCGEDNEKLNYKDTCDSAYDNSKVEELTNEFMEIIGG 503

Query: 416 -RLIL-----------LKMK------KF------------------SSADYIRK-QLESK 438
            R               K K       F                  S  D +R  QL   
Sbjct: 504 FRSCAKEESKKLMGLCRKEKKAISNNDFGNVGSLIDEVNKSSISLLSKCDQVRDVQLSKL 563

Query: 439 GFILEDYKNP 448
              LED  + 
Sbjct: 564 KITLEDRPDG 573


>gi|114052012|ref|NP_001039409.1| cysteinyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|115502846|sp|Q2KIF8|SYCM_BOVIN RecName: Full=Cysteinyl-tRNA synthetase, mitochondrial; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|86826764|gb|AAI12655.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Bos taurus]
          Length = 555

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 159/523 (30%), Positives = 226/523 (43%), Gaps = 93/523 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K+YN+L R+              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 41  DTGVKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVF 100

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V  V  ITD+DDKII RA +         + + +     + F +D   L  L PT 
Sbjct: 101 GC-TVVMVMGITDVDDKIIRRANEMSV------SPASLARLYEEDFKQDMAALKVLPPTA 153

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T H+PQ++  I+ +I +GHAY  A   + FD  S  + YG                
Sbjct: 154 YLRVTEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGDRYGKLVGVAPGPVG----E 209

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P EP W SPWG GRPGWHIECS ++S   G   DIH GG+D
Sbjct: 210 PVDSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIHSGGVD 269

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     +  +  N ++H+G L++   G KMSKS  N++TI + L     
Sbjct: 270 LAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYVTIKDFL----- 324

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
             RS    V RL  L + YR  ID++   L EA  LL                       
Sbjct: 325 --RSTSPDVFRLFCLRSSYRSAIDYSEGALLEARSLLRATAAFVEDARAYLRGQLAGGPI 382

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF---NASAHIL 392
                    G    AV +AL +D +TV A+ A+  L     +             S  +L
Sbjct: 383 QEDVLWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPAVL 442

Query: 393 GIEVCK-EHLNKNISI-------------------AIEKLVQERLILLKMKKFSSA---- 428
           G  V   EH  + + +                    +E+LV+ RL + +   F+ A    
Sbjct: 443 GAVVASVEHFFETVGVSLAERQCVPGAGSPAALYSLVEELVRFRLKVRQ---FALASGEA 499

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQ 452
                              D +R+ L   G  ++D       +
Sbjct: 500 PGEARRQRLLERQPLLEACDALRRDLAVHGISIKDRSGSSTWE 542


>gi|28493314|ref|NP_787475.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572575|ref|NP_789355.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|61216626|sp|Q83GF1|SYC1_TROWT RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|61216630|sp|Q83HS8|SYC1_TROW8 RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
           Full=Cysteine--tRNA ligase 1; Short=CysRS 1
 gi|28410707|emb|CAD67093.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476355|gb|AAO44444.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 466

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 151/487 (31%), Positives = 218/487 (44%), Gaps = 56/487 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+TL R+I      D   + +YVCGPTV    HIG+ R  +V+D L R L Y   
Sbjct: 1   MTLNLYDTLSRRIVTLDCRD--RVELYVCGPTVQSPPHIGHMRSGVVYDCLRRWLEYKGL 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YVRNITDIDDKI+  AR         +    I  + +  F +    L    P ++
Sbjct: 59  --PVLYVRNITDIDDKILASARS----TETGETWWQIAYRVSGLFNEAYKALFVKPPDYE 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           P  T HIP +I  I+ +I    AY A   +  + F     P+YG  + +K     +    
Sbjct: 113 PLVTAHIPDIIKAIEILIQKNVAYRAMDGSGNVFFSIDKHPSYGELTDQK----DLLIDD 168

Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K++P DF LWK     +P    WESPWG GRPGWHIECS M++ YLG  F IHGG
Sbjct: 169 CITPGKRDPRDFTLWKEKKDTDPDLAFWESPWGPGRPGWHIECSVMATKYLGTRFAIHGG 228

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHHENE+AQ+         A+IW+H G +N+EG KMSKS GN + + + L    
Sbjct: 229 GVDLRFPHHENELAQARAL--GAHFADIWMHTGAVNVEGIKMSKSFGNSVLVQDALS--- 283

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQTS 341
                     +R   L  HYR  +++T   L++A    +K                 +  
Sbjct: 284 ----KVSPSALRYYFLTAHYRSTLNYTENSLSQACNTWNKLQGCIYRVYDYLEREGYEND 339

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGI 394
                ++    ++L NDLN   A+  +H   RE  +  D       L    +    +L I
Sbjct: 340 FCVSQLNTDFSTSLDNDLNIPEALAIVHNKVREMNRLVDTQADMQYLGNTLSEVVEMLSI 399

Query: 395 EVCKEH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               +H          N    ++ L++ R        F ++D +R+ L      + D   
Sbjct: 400 LCPIDHKITYTSGAQDNSKALLQVLLEARDRARSKGDFYTSDLLRELLAEADISVSDGHV 459

Query: 448 PDNGQRM 454
                R 
Sbjct: 460 SYGSPRG 466


>gi|2181176|emb|CAA67901.1| cysteine tRNA synthetase [Azospirillum brasilense]
          Length = 448

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 175/475 (36%), Positives = 228/475 (48%), Gaps = 46/475 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F+ + P  + MYVCGPTVYD AHIGNARP +VFD+L+R       
Sbjct: 1   MPLDLYNTLTRRKERFEPMTPDRVGMYVCGPTVYDTAHIGNARP-VVFDLLFR--LLRRL 57

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNIT  DDKII+R          + A      +           L   APT +
Sbjct: 58  YPAVTYVRNITASDDKIIDRRATTGADRGADQAHRGPLPRRH-------GPLNA-APTIE 109

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI  M+ LI  +I                    + G  SRR +DE   G RV   
Sbjct: 110 PRATHHISHMVALIGLLIEPATPTPRKGTCCSPCRRWRSTGQLSRRSLDEMIAGARVEVA 169

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++ +DF+LWK ST  +PGW+SPWGRGRPGWHIECSAM+  +LG  FDIHGGGLDLI 
Sbjct: 170 PYKRDSSDFVLWKPSTDGQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLIL 229

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN-GNFITINELLETKKFGGRS 301
           P HENEIAQS CA    +       NGF+ +EGR+   S    F T      T+  GG  
Sbjct: 230 PDHENEIAQSRCAHAGSRWPATGSTNGFVTVEGREGCPSRWATFFTGGTSCWTEFPGGGH 289

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSALY 356
                +R       YR      +    E++  L +W Q          A     VL+AL 
Sbjct: 290 --PLGVR------PYRSR---GLPEAEESKATLDRWYQALRGDPAPAQAELPFDVLAALE 338

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE------------VCKEHLNKN 404
           +DLN+  AI  LH+LA    K         A       E            +  E     
Sbjct: 339 DDLNSPLAISHLHELASAVNKATGEAEKAAAKGRCRSAERWAAPETRSVVPLGAEGAAAL 398

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               I++ +++R    K K ++ AD IRK+L   G +LED      G + T WK+
Sbjct: 399 SDADIQQRIEDRSAARKAKNYAEADRIRKELADLGIVLED------GPQGTTWKR 447


>gi|3122878|sp|O07045|SYC_AZOBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
          Length = 448

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 177/475 (37%), Positives = 229/475 (48%), Gaps = 46/475 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YNTL R+   F+ + P  + MYVCGPTVYD AHIGNARP +VFD+L+R       
Sbjct: 1   MPLDLYNTLTRRKERFEPMTPDRVGMYVCGPTVYDTAHIGNARP-VVFDLLFR--LLRRL 57

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VTYVRNIT  DDKII+R          + A      +           L   APT +
Sbjct: 58  YPAVTYVRNITASDDKIIDRRATTGADRGADQAHRGPLPRRH-------GPLNA-APTIE 109

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT+HI  M+ LI  +I                    + G  SRR +DE   G RV   
Sbjct: 110 PRATHHISHMVALIGLLIEPATPTPRKGTCCSPCRRWRSTGQLSRRSLDEMIAGARVEVA 169

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            +K++ +DF+LWK ST  +PGW+SPWGRGRPGWHIECSAM+  +LG  FDIHGGGLDLI 
Sbjct: 170 PYKRDSSDFVLWKPSTDGQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLIL 229

Query: 243 PHHENEIAQSCCADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           P HENEIAQS CA   E  A  W+H         R+MSKS GN +       T+  GG  
Sbjct: 230 PDHENEIAQSRCAHAGEPLARYWVHQRLRDRRGARRMSKSLGNLLHRGTSCWTEFPGGGH 289

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSALY 356
                +R       YR      +    E++  L +W Q          A     VL+AL 
Sbjct: 290 --PLGVR------PYRSR---GLPEAEESKATLDRWYQALRGDPAPAQAELPFDVLAALE 338

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE------------VCKEHLNKN 404
           +DLN+  AI  LH+LA    K         A       E            +  E     
Sbjct: 339 DDLNSPLAISHLHELASAVNKATGEAEKAAAKGRCRSAERWAAPETRSVVPLGAEGAAAL 398

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               I++ +++R    K K ++ AD IRK+L   G +LED      G + T WK+
Sbjct: 399 SDADIQQRIEDRSAARKAKNYAEADRIRKELADLGIVLED------GPQGTTWKR 447


>gi|296481581|gb|DAA23696.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor [Bos
           taurus]
          Length = 555

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 155/520 (29%), Positives = 224/520 (43%), Gaps = 87/520 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K+YN+L R+              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 41  DTGVKVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVF 100

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V  V  ITD+DDKII RA +         + + +     + F +D   L  L PT 
Sbjct: 101 GC-TVVMVMGITDVDDKIIRRANEMSV------SPASLARLYEEDFKQDMAALKVLPPTA 153

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T H+PQ++  I+ +I +GHAY  A   + FD  S  + YG                
Sbjct: 154 YLRVTEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGDRYGKLVGVAPGPVG----E 209

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P EP W SPWG GRPGWHIECS ++S   G   DIH GG+D
Sbjct: 210 PVDSDKRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIHSGGVD 269

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     +  +  N ++H+G L++   G KMSKS  N++TI + L     
Sbjct: 270 LAFPHHENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYVTIKDFL----- 324

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
             RS    V RL  L + YR  ID++   L EA  LL                       
Sbjct: 325 --RSTSPDVFRLFCLRSSYRSAIDYSEGALLEARSLLRATAAFVEDARAYLRGQLAGGPI 382

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
                    G    AV +AL +D +TV A+ A+  L     +                  
Sbjct: 383 QEDVLWERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPAVL 442

Query: 383 -PIFNASAHIL---GIEVCKEH--LNKNISIAIEKLVQERLILL-KMKKFSSA------- 428
             +  +  H     G+ + +           A+  LV+E +    K+++F+ A       
Sbjct: 443 GAVVASVEHFFETVGVSLAERQCVPGAGSPAALHSLVEELVCFRLKVRQFALASGEAPGE 502

Query: 429 ----------------DYIRKQLESKGFILEDYKNPDNGQ 452
                           D +R+ L   G  ++D       +
Sbjct: 503 ARRQRLLERQPLLEACDALRRDLAVHGISIKDRSGSSTWE 542


>gi|157167844|ref|XP_001662428.1| cysteinyl-tRNA synthetase [Aedes aegypti]
 gi|108871286|gb|EAT35511.1| cysteinyl-tRNA synthetase [Aedes aegypti]
          Length = 526

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 163/507 (32%), Positives = 242/507 (47%), Gaps = 80/507 (15%)

Query: 5   IKIYNTLERKITEFQAIDPSNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           I+IY+   R+    Q   P+ I   Y CGPTVYD AHIG+A   +  D+L R+L+ ++G 
Sbjct: 22  IRIYSCRFREKVPLQLPSPARITSFYTCGPTVYDSAHIGHASCYVRLDILQRILKDHFGL 81

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           + VT   NITDIDDKII RA +      +    + I     Q+F  D  RL    P  + 
Sbjct: 82  RLVT-AMNITDIDDKIIRRAAE------VGKPWTDIARHYEQEFWTDLQRLNVRPPDIKL 134

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           R T+HIP+++  I+ +I   +AY++ +  + F+T++ P YG       ++Q         
Sbjct: 135 RVTDHIPRIVAFIEQLIAKNYAYKSSDGSVYFETANYPQYGKLQNIPTEQQSSPES---- 190

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+ ADF LWK + P EP W SP+G GRPGWHIECS +++   G+  D H GGLDL F
Sbjct: 191 --KKSAADFALWKAAKPGEPSWPSPFGLGRPGWHIECSTLATQIFGRQLDFHAGGLDLRF 248

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGR 300
           PHHENE AQSCC   ++   + WIH G L+LEG+  KMSKS  N ++I EL+        
Sbjct: 249 PHHENEEAQSCCYHGVDDWVHYWIHTGQLHLEGQTHKMSKSLKNTVSIGELMG------- 301

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------- 338
            + A   R+  L++HYR  I+F    +T A  +L K+                       
Sbjct: 302 KYSADEFRMLCLLSHYRSVIEFGDDSMTVATNVLKKFRSFFGDCRAYVEGVKPAGMIDSG 361

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLL------PIFN 386
                   +D  +   L ND NT S + +L  LA    K      + D         +  
Sbjct: 362 ALHGKVQEVDEKIEEFLRNDFNTASVVTSLGDLASTVNKSINQGNSGDAAIVASESGVVQ 421

Query: 387 ASAH-------ILGI----EVCKEHLNKNISIAIEKLVQ--------ERLILLKMKK--- 424
           A  +       +LG+    EV K         +IE++++         R+  +  K    
Sbjct: 422 AMMNYIRGKFTLLGLLEFDEVRKTSPGSGDGHSIEQVIESMVQIRGAIRVQAMDSKDRRL 481

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNG 451
           F+  D IR +L+     ++D+    + 
Sbjct: 482 FAICDQIRDRLKEVNVEIKDHGKSSSW 508


>gi|26332939|dbj|BAC30187.1| unnamed protein product [Mus musculus]
          Length = 581

 Score =  415 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 157/526 (29%), Positives = 239/526 (45%), Gaps = 92/526 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 64  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 123

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 124 GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 176

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  
Sbjct: 177 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAE 232

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+D
Sbjct: 233 PGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGID 292

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 293 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT--- 349

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GII 347
               +   V RL  L T+YR  I+++   L EA+ LL                    G +
Sbjct: 350 ----FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPV 405

Query: 348 DP------------AVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
           +             AV +AL ND +T  A+  +  L   + +                  
Sbjct: 406 EEDVLWERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVF 465

Query: 380 -DLLPIFNASAHILGIEVCKEHLNKNISI------AIEKLVQERL--------------I 418
             ++         +GI +         S        +++LV+ RL               
Sbjct: 466 GAIISYVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGE 525

Query: 419 LLK----MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K     ++    + D +R+ L + G  ++D      G   + W+
Sbjct: 526 ARKRQLQERQPLLEACDTLRQDLVTHGINVKD-----RGSAASTWE 566


>gi|332654253|ref|ZP_08419997.1| cysteine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517339|gb|EGJ46944.1| cysteine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 480

 Score =  415 bits (1066), Expect = e-113,   Method: Composition-based stats.
 Identities = 151/489 (30%), Positives = 221/489 (45%), Gaps = 48/489 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+   K  EF    P ++ MY CGPTVY FAHIGN R  I+ DVL + LRY   + 
Sbjct: 1   MLLYNSATHKKEEFTTHTPGHVEMYTCGPTVYHFAHIGNLRSYIMEDVLEKFLRYSGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSI----PINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V  V NITD+     +    E   +      +  +  I    T  F  D  +L    P 
Sbjct: 60  -VNRVMNITDVGHLSSDADTGEDKMLKGAKREHKTVMEIAQYYTDAFFSDCAKLNIKTPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
               AT  I + I ++  ++  G+AY A   + FD+S +  Y  F+    ++  +G R  
Sbjct: 119 TVQPATGCIDEYIKIVSGLLDKGYAYVAGGNVYFDSSKLDRYYIFNDHNEEDLAVGVREG 178

Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V E  +K+N  DF+LW   +  E     W+SPWG G PGWHIECS +S  Y G+  D+H 
Sbjct: 179 VEEDSNKRNKNDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSGISLKYNGEYLDLHC 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D  FPHH NEIAQS            W H   LN    KMSKS G F+T++ L E  
Sbjct: 239 GGIDNAFPHHTNEIAQSESYLG-HPWCKQWFHVHHLNTNSGKMSKSKGEFLTVSLLEE-- 295

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---GIIDPA-- 350
               + +     R   L +HYR+ + F+ + L  A+    K  +   +    G  D A  
Sbjct: 296 ----KGYDPLSYRFFCLQSHYRKGLVFSWENLDNAQGAYQKLIKRIAALKEGGEPDQAVV 351

Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN-- 402
                  L  + NDLNT  A+  L+   +  T +   L I      +L + + ++     
Sbjct: 352 QEYREKFLQQVGNDLNTSMAVTLLYDALKAKTDDATKLAILGDFDQVLSLSLLEKAAQVR 411

Query: 403 -----------------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
                                 A++ LV ER    K K F+ AD IR +L+++G  + D 
Sbjct: 412 KEQAAQKTTSAGNYTITGEGDPAVDALVLERYQAKKAKDFAKADQIRDELKAQGIEITDV 471

Query: 446 KNPDNGQRM 454
               + +R+
Sbjct: 472 PGGASWKRV 480


>gi|115502847|sp|Q8BYM8|SYCM_MOUSE RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|148690122|gb|EDL22069.1| mCG11180, isoform CRA_e [Mus musculus]
          Length = 551

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 157/526 (29%), Positives = 239/526 (45%), Gaps = 92/526 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  
Sbjct: 147 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAE 202

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+D
Sbjct: 203 PGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGID 262

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 263 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT--- 319

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GII 347
               +   V RL  L T+YR  I+++   L EA+ LL                    G +
Sbjct: 320 ----FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPV 375

Query: 348 DP------------AVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
           +             AV +AL ND +T  A+  +  L   + +                  
Sbjct: 376 EEDVLWERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVF 435

Query: 380 -DLLPIFNASAHILGIEVCKEHLNKNISI------AIEKLVQERL--------------I 418
             ++         +GI +         S        +++LV+ RL               
Sbjct: 436 GAIISYVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGE 495

Query: 419 LLK----MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K     ++    + D +R+ L + G  ++D      G   + W+
Sbjct: 496 ARKRQLQERQPLLEACDTLRQDLVTHGINVKD-----RGSAASTWE 536


>gi|330805509|ref|XP_003290724.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
 gi|325079146|gb|EGC32761.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
          Length = 638

 Score =  414 bits (1064), Expect = e-113,   Method: Composition-based stats.
 Identities = 157/534 (29%), Positives = 242/534 (45%), Gaps = 102/534 (19%)

Query: 2   KKKIKIYNTLERKITEFQ--AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           + ++ + N+L    T F     D   I  Y CGPTVYD +H+G+AR  I FD+L R++R 
Sbjct: 30  ETELVVNNSLTGGKTPFVFSNKDGKTITWYACGPTVYDASHMGHARTYISFDILRRVMRD 89

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           Y G   + +V NITDIDDKII R++++      N + S ++ K    F +D   L  L P
Sbjct: 90  YLGFN-IRFVMNITDIDDKIIIRSKEQ------NISHSDLSKKWESSFFEDMKALNVLPP 142

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSF-----SRRKID 171
               R T ++PQ++  +Q II +G AYE+   + FDT S     +YG           + 
Sbjct: 143 DALTRVTEYVPQIVDYVQKIIDNGFAYESEGSVYFDTQSFIKSHDYGKLEPNSVGNENLA 202

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G        K++P DF LWK+S   EP W SPWG GRPGWHIECSAM+S  LG   
Sbjct: 203 AEGEGALSVGISDKRSPFDFALWKKSKEGEPVWSSPWGEGRPGWHIECSAMASDILGDNI 262

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG DL FPHH+NE+AQS      ++  N +IH+G L ++G KMSKS  NFITI E 
Sbjct: 263 DIHSGGSDLKFPHHDNELAQSEAYFGNKQWINYFIHSGHLLIDGLKMSKSLKNFITIKEA 322

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL------------------------ 327
           LE        + +  +R+  ++  Y + ++++ + +                        
Sbjct: 323 LE-------KYTSRQMRMFFILHKYDKAMNYSSESMGYAIEMEKTFVEFFHTVKQLIRDS 375

Query: 328 --------TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN- 378
                     AE  L K+ Q + +       V   L ++ NT  A++AL +L  ++    
Sbjct: 376 PLSNPQFWENAEKDLEKYLQHTKA------EVHRFLMDNFNTSDALKALSELVSKTNVYL 429

Query: 379 ---------------HDLLPIFNASAHILGI-----------EVCKEHLNKNISIAIEKL 412
                            +        ++ G+              K +L + ++  ++ +
Sbjct: 430 RDCNAQKKNPRINLVQTVAEYVTYIFNVFGLVDNSSNSIGFGSGVKGNLEEEMTPILDAI 489

Query: 413 VQERLILLK---MKK----FSSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
            + R  +      K       + D +R + L   G  ++D      G     WK
Sbjct: 490 TKFRSEVRSSAIAKDTASILKTCDTLRDEILPLLGIKMDD-----KGANGAIWK 538


>gi|332242118|ref|XP_003270233.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           isoform 1 [Nomascus leucogenys]
          Length = 564

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 150/497 (30%), Positives = 223/497 (44%), Gaps = 76/497 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 49  ETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 108

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT 
Sbjct: 109 GCN-IVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTV 161

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II  GHAY  A   + FD  +  + YG                
Sbjct: 162 YLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKARGDKYGKLVGVVPGPVG----E 217

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+D
Sbjct: 218 PADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGID 277

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + E+  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 278 LAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT--- 334

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLS-------- 335
               +     R   L + YR  I+++                 L +A   +         
Sbjct: 335 ----FSPDTFRFFCLRSSYRSAINYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSV 390

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------- 384
           +             AV +AL +D +T   I A+  LA          P            
Sbjct: 391 REAMLWERLSSTKRAVKAALADDFDTPRVIDAILGLAHHGNGQLRAAPKEPGGPRSPAVF 450

Query: 385 ------FNASAHILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSA---- 428
                 F      +GI +  +           +   +++LV+ R  + +   F+ A    
Sbjct: 451 GAIISYFEQFFETVGISLANQRCVSGDGSEATLHGVVDELVRFRQEVRQ---FALAMPEA 507

Query: 429 --DYIRKQLESKGFILE 443
             D  R+QL  +  +LE
Sbjct: 508 TGDARRQQLLERQPLLE 524


>gi|149730502|ref|XP_001496717.1| PREDICTED: similar to Cysteinyl-tRNA synthetase 2, mitochondrial
           (putative) [Equus caballus]
          Length = 559

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 155/523 (29%), Positives = 234/523 (44%), Gaps = 93/523 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K+YN+  R+              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 45  DTGVKVYNSRTRRKDPLIVGSADATSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 104

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII RAR+      +N + + + +   + F +D   L  L PT 
Sbjct: 105 GCN-IIMVMGITDVDDKIIRRARE------MNVSPTSLANLYEEDFKQDMAALKILPPTV 157

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II  GHAY  A   + FD  S  + YG                
Sbjct: 158 YLRVTENIPQIISFIEGIIAKGHAYSTAKGNVYFDLQSRGDKYGKLVGVAPGPVG----E 213

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P +  K++ +DF LWK + P E  W SPWG GRPGWHIECS +SS   G   DIH GG+D
Sbjct: 214 PVESDKRHASDFALWKAAKPQEMFWASPWGNGRPGWHIECSTISSLVFGSQLDIHSGGID 273

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 274 LAFPHHENEIAQCEVFHQCKQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKTA-- 331

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKWPQTSTSKGII 347
                   V RL  + + YR  ID++   + EA+ LL            + +   + G I
Sbjct: 332 -----SPDVFRLFCMRSSYRSAIDYSDGAVLEAKHLLLAATAFVEDARAYMRGQLACGPI 386

Query: 348 DP------------AVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
                         AV +AL +D +T  A+ A+  L     +                  
Sbjct: 387 GEDVLWERLSHTKGAVKAALADDFDTPGAVDAVMDLIHHGNRQLKAVTKEPGGPRSPAVF 446

Query: 380 -DLLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++         +GI +           +  +   +E+LV+ RL + +   F+ A    
Sbjct: 447 GSIVSYIEQFFETVGISLADRQFVSGDSGSATLHSVVEELVRFRLKVRQ---FALATGEA 503

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQ 452
                              D +R+ L + G  ++D  +    +
Sbjct: 504 TREARRQQLLERQPLLEACDTLRQDLVAHGISIKDRSSTSTWE 546


>gi|219849725|ref|YP_002464158.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219543984|gb|ACL25722.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 400

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 145/410 (35%), Positives = 203/410 (49%), Gaps = 35/410 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++TL R    F       + +YVCG T YD  H+G+AR  IVFDVL R LR      
Sbjct: 1   MQLFSTLSRIREPFSPPTDRPVTLYVCGVTPYDTTHMGHARTFIVFDVLVRYLRRQGA-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY +NITD+DD + ERAR++  +         +  +   Q   D   L  L PT  PR
Sbjct: 59  TVTYCQNITDVDDPLFERARRDGVNWY------ELAERQIAQLRADCADLNILPPTFAPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVP 180
            +  +  MI +I+ ++  GHAY  +  + F   + P++G  +R    E           P
Sbjct: 113 VSEEVAIMIPIIERLVELGHAYVVDGNVYFSIQTDPDFGRMARMGYAELLSIANQRGNNP 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LW+R  P EP WESPWG GRPGWHIECSAMS  YLG+  DIHGGG DL
Sbjct: 173 HDPNKRDPLDFVLWQRGNPDEPKWESPWGLGRPGWHIECSAMSIRYLGEQIDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHH  EIAQS  A      A IW+H G + L+G KMSKS GN +   + L+       
Sbjct: 233 IFPHHSCEIAQSESATGKRPFARIWMHVGLVWLDGEKMSKSLGNLVFARDALQMH----- 287

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAV 351
                 +R  +L  HYRE  D+  + +   E   +      +  G              V
Sbjct: 288 --HPDALRWYLLSEHYREDFDYRREAVARYEQYAADLRHALSLTGGTHSPLDVSRGRSDV 345

Query: 352 LSALYNDLNTVSAIQALH-------KLARESTKNHDLLPIFNASAHILGI 394
           ++++ +DL+T +A+ +LH         A E              A +LG 
Sbjct: 346 ITSMNDDLDTPAALASLHAMAGMIIDAAAEGRDVSTAQATVRDLALMLGF 395


>gi|332242120|ref|XP_003270234.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
           isoform 2 [Nomascus leucogenys]
          Length = 572

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 150/497 (30%), Positives = 223/497 (44%), Gaps = 76/497 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 49  ETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 108

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT 
Sbjct: 109 GCN-IVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTV 161

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II  GHAY  A   + FD  +  + YG                
Sbjct: 162 YLRVTENIPQIISFIEGIIARGHAYSTAKGNVYFDLKARGDKYGKLVGVVPGPVG----E 217

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+D
Sbjct: 218 PADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGID 277

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + E+  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 278 LAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT--- 334

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLS-------- 335
               +     R   L + YR  I+++                 L +A   +         
Sbjct: 335 ----FSPDTFRFFCLRSSYRSAINYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSV 390

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------- 384
           +             AV +AL +D +T   I A+  LA          P            
Sbjct: 391 REAMLWERLSSTKRAVKAALADDFDTPRVIDAILGLAHHGNGQLRAAPKEPGGPRSPAVF 450

Query: 385 ------FNASAHILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSA---- 428
                 F      +GI +  +           +   +++LV+ R  + +   F+ A    
Sbjct: 451 GAIISYFEQFFETVGISLANQRCVSGDGSEATLHGVVDELVRFRQEVRQ---FALAMPEA 507

Query: 429 --DYIRKQLESKGFILE 443
             D  R+QL  +  +LE
Sbjct: 508 TGDARRQQLLERQPLLE 524


>gi|308450233|ref|XP_003088225.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
 gi|308248740|gb|EFO92692.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
          Length = 364

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 145/382 (37%), Positives = 205/382 (53%), Gaps = 49/382 (12%)

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSF 165
              D   L CLAP   PRATN+I QM  +I N++  G AY  AN ++ F+     NYG  
Sbjct: 1   MNDDAENLGCLAPDEAPRATNYIDQMQNMIGNLVNKGTAYPSANGDVYFEVEKFENYGRL 60

Query: 166 SRRKIDEQKMGT--RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
           S RK+D+ + G   RV  +  KK+P DF+LWK +   EP W SPWG GRPGWHIECSAMS
Sbjct: 61  SGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMS 120

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           +  LG  FDIHGGG DL+FPHHENEIAQS  A   E+  N W+H GF+N++G KMSKS G
Sbjct: 121 TCCLGNHFDIHGGGSDLLFPHHENEIAQSEAAT-DEQYVNYWMHVGFINVDGEKMSKSLG 179

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------LSK 336
           NF TI +++E        +   VIR  ++ +HYR  +DF+   L EA++        L +
Sbjct: 180 NFFTIRDVME-------KFHPEVIRYFIVSSHYRSRVDFSDFALKEAKLRFLVFIMHLKR 232

Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLL------PIFNA 387
             ++   K        +++ +D NT  AI  L ++ +E     K  +             
Sbjct: 233 INKSMAIKPQ------TSMRDDFNTSEAIAVLFEIIKELNRAVKEENAAQSTLYYSTLRH 286

Query: 388 SAHILGI------EVCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
             +ILG+      +  K  + +         IE  +Q+R+   K K F+ AD IR+ L +
Sbjct: 287 LTNILGLVQYNVDDFLKSDIGQEALGLSEADIEDFIQQRVDAKKNKDFARADEIRQSLLA 346

Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
           +G +LED +      + T W++
Sbjct: 347 QGVVLEDTR------QGTIWRR 362


>gi|116515227|ref|YP_802856.1| hypothetical protein BCc_306 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285377|sp|Q057D6|SYC_BUCCC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|116257081|gb|ABJ90763.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 476

 Score =  413 bits (1062), Expect = e-113,   Method: Composition-based stats.
 Identities = 160/481 (33%), Positives = 240/481 (49%), Gaps = 57/481 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++I+NTL +K   F  +    I +YVCG T YDF HIG+AR  I+FD++ R L+Y     
Sbjct: 2   LRIFNTLTKKKEIFDFLLNKKINIYVCGVTTYDFCHIGHARTFIIFDIIIRYLQYLGYN- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              Y+RNITDIDDKII +A+        N++I I+ ++  +   KD   L  + P  +PR
Sbjct: 61  -TFYIRNITDIDDKIINKAKIN------NESIHILVNRMIKLMHKDFLSLNLIKPDQEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRR--KIDEQKMGTRVPE 181
            T HI  +I  I+ ++ + +AY ++N +I+F  ++   YG  S R     E+   T   E
Sbjct: 114 VTQHISNIISSIKLLLKNNYAYVSDNKDILFKLNNFKEYGFLSNRMFNCSEKNFTTISKE 173

Query: 182 KYHKKNPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGG 236
           K +  N  DF+LWK S  +       W SPWG GRPGWHIECS++ +++      DIHGG
Sbjct: 174 KNYINNINDFVLWKHSNQLSIDTCTNWSSPWGAGRPGWHIECSSIINNFFKDGVVDIHGG 233

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL+FPHHENEIAQ    +      N WIH+G +  +  KMSKS  N ++I  LL    
Sbjct: 234 GIDLLFPHHENEIAQLKSMNNSFS-VNFWIHSGMVINKNHKMSKSFSNSVSIQYLL---- 288

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------- 343
              + + + +IR   L THYR P+ ++ + L   + +  K  ++                
Sbjct: 289 ---KKYDSEIIRWYFLATHYRHPLYYSEKNLLMMKNIFIKIYRSLLDCVVTINTKIDYEY 345

Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILG 393
             +  I     SA+ +D NT  A   L K+++   KN          L         ILG
Sbjct: 346 HLRNKIKRKFFSAMNDDFNTPKACSILQKISKLIYKNKKNNTYLANILASDLVYLGKILG 405

Query: 394 IEVCKEH----------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           +                 + ++ I +EKL   R      K+++ +D IRK+L   G I+E
Sbjct: 406 LFQNDPKNFFLKDNFCNKSTDLLIIVEKLFHMRNFYRSKKQWNLSDIIRKKLFCLGVIVE 465

Query: 444 D 444
           D
Sbjct: 466 D 466


>gi|223996950|ref|XP_002288148.1| probable cysteinyl-trna synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220975256|gb|EED93584.1| probable cysteinyl-trna synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 474

 Score =  413 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 154/489 (31%), Positives = 229/489 (46%), Gaps = 60/489 (12%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YN+L R  T F  +   ++ MY CGPTVYD AH+GN R  + +DVL R+L Y   + 
Sbjct: 1   LTLYNSLTRSKTPFTPLRSPSVSMYTCGPTVYDSAHVGNFRAFLTYDVLKRVLLYLGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TD+DDKII+R  +E  S+        +T K   +F +D   L  +     PR
Sbjct: 60  -VDHVCNLTDVDDKIIKRCEREGVSLI------ELTRKFEGKFFEDLEALNIIKAREYPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYG-SFSRRKIDEQKMGTR---- 178
           AT HI +M  LI ++  +G AY++      F  S    YG    +   ++ K+G      
Sbjct: 113 ATEHIDEMAKLILDLERNGLAYQSEEGSWYFSVSKKEGYGTRLVQLDPEQLKIGASAQRG 172

Query: 179 ----VPEKYHKKNPADFILWKRSTPMEPGWESPW---------GRGRPGWHIECSAMSSH 225
                     K+   DF LWK   P     ++ W         GRGRPGWH+ECSAM+  
Sbjct: 173 SLDADEYDTEKEGVRDFCLWKAYKPEFDREDATWDPDGVTRNIGRGRPGWHLECSAMARK 232

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           YLG   D+H GG+DL FPHHENEIAQS  A+      N WIHNGF+N+   KMSKS GNF
Sbjct: 233 YLGDTIDLHAGGVDLKFPHHENEIAQSEGANCA-PFCNCWIHNGFVNIGDEKMSKSKGNF 291

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV----------QRLTEAEILLS 335
           +T+     T             R  ++ + YR P+ FT           +RL + + LL 
Sbjct: 292 LTLRGACPTAD------DVRAYRYLVVSSQYRNPLSFTDAALGAAKGALKRLDKVKTLLD 345

Query: 336 KWPQTSTSKGIIDPA-----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-- 388
           +  ++S        A        A+ +DL+   A   L  + + + K    +        
Sbjct: 346 EALESSNDNSGDASAEKLTNFEVAIADDLSMPRASACLFSIVKAAEKEFKRVDKAKDEDD 405

Query: 389 ----AHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
                 ++G++  ++ L+       I   +  LV +R      K +  AD +R ++   G
Sbjct: 406 NAPPLDLVGLQRVRDALDLMDNVFEIPQDVMDLVVQRSAAKDAKDWDLADSLRTRITELG 465

Query: 440 FILEDYKNP 448
           F ++D K  
Sbjct: 466 FAVKDVKGG 474


>gi|301060756|ref|ZP_07201571.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300445153|gb|EFK09103.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 770

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 142/490 (28%), Positives = 234/490 (47%), Gaps = 58/490 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +++YNT+ R+  +F  I  + + +Y CGPT+     +   R ++  D++ R + Y  
Sbjct: 303 KSGLRVYNTMTRRKEDFVPIKENQVTLYSCGPTLCQVVDLVQCRRLVFSDLITRYMVYRG 362

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++ N+TD+DD+ IE A++         ++   T      F+KD   L  +  T 
Sbjct: 363 YD--VNHIMNVTDLDDRTIEGAQR------AGVSLKEFTDMFYNSFMKDLDSLNIIRATQ 414

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            PR + H+  MI L Q ++  G+AYE    I FD S   +YG  S+  +++ ++G  V  
Sbjct: 415 YPRPSEHVDDMIELAQTLLEKGYAYEKLRSIYFDISRFKDYGKLSKIDLNKIRIGKTVDL 474

Query: 181 EKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++Y K+NP DF L KRST  E      +++ WG  RPGWH+EC+A++   LG   DIH  
Sbjct: 475 DQYEKENPKDFTLLKRSTLNELKSGLFFKTKWGNIRPGWHLECAAIALKTLGPTHDIHTS 534

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+ L+FPHHEN IA S  A      AN W+HN  +   G   + S+   +T+ +LL T+ 
Sbjct: 535 GVSLVFPHHENAIAISKAATG-RPLANYWLHNEPVMFNGP--NPSDDVKLTLRDLL-TEG 590

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL---LSKW-------------PQT 340
           F GR      IR  +L  HYR+PI F+  +L         L K+             P  
Sbjct: 591 FKGRE-----IRYWLLSRHYRKPIFFSHTKLAAVRNTIAHLDKFVQKIYFAKSTSEDPDL 645

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASA 389
             +   +    ++A+ +D N  +A+ AL +  R      D            L       
Sbjct: 646 DQTIYALKQGFVTAMDDDFNVAAALAALFQFTRNINLRMDQRGLSTSDREKTLAALTRIN 705

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +LGI         +    + KL+++R +    K + +AD++RK++E+ G  + D  +  
Sbjct: 706 SVLGIMNLDP---PDSDAEVAKLIEKRELARSQKDWGTADHLRKEMEAMGIEVIDTPSGP 762

Query: 450 NGQRMTRWKQ 459
                 RW++
Sbjct: 763 ------RWRK 766


>gi|327268009|ref|XP_003218791.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 686

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 155/551 (28%), Positives = 237/551 (43%), Gaps = 118/551 (21%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  I+ YN+L +        +P  +  Y CGPTVYD AH+G+A   + FD++ R++   +
Sbjct: 156 ESGIQTYNSLSKSKEPLVLRNPDVVTWYSCGPTVYDHAHLGHACSYVRFDIIRRIMTRLF 215

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G K V  V  ITDIDDKII+RA +      +  +   +     + F +D   L  L PT 
Sbjct: 216 G-KEVVMVMGITDIDDKIIKRANE------MGISPLTLARFYEEDFKQDMAALKVLPPTV 268

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  IQ II   H Y  +   + FD  S    YG  +    D Q+     
Sbjct: 269 YMRVTENIPQIISFIQKIIASRHGYATSKGNVYFDVRSRGERYGKLANIYPDAQE----E 324

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K +  DF LWK + P E  W+SPWG+GRPGWHIECS +SS   G   DIH GG+D
Sbjct: 325 PVDSDKSHVKDFALWKAAKPQEMCWDSPWGKGRPGWHIECSTISSLVFGGHLDIHTGGID 384

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELLETKKFG 298
           L FPHHENEIAQ     + ++ AN ++H+G L+++G  KMSKS  N+ITI + L      
Sbjct: 385 LAFPHHENEIAQCEVYHQCDQWANYFLHSGHLHVKGSEKMSKSLKNYITIKDFL------ 438

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
            + + +   R+  L + YR  I+++   ++EA+ +L       +S               
Sbjct: 439 -KEFSSDQFRMLCLRSRYRAGIEYSDDHMSEAKSILQIIYFFLSSVNAYMKGQLLCEDIR 497

Query: 347 ----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------- 382
                        AV +A  +D +T  A+ A+  L     +    +              
Sbjct: 498 EDVLWERLAHTKAAVRAACADDFDTPRAVGAIMDLIHHGNRQLKAVTKETGSPRSAMVFG 557

Query: 383 PIFNASAHIL---GIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSA----- 428
            I +     L   GI + +  +      +  +S  I++LV  R  +     F+ A     
Sbjct: 558 AIVSYIVEFLNTVGIALSEGEVTPENKHSAILSSVIDELVSFRTKVR---NFALAAPEAT 614

Query: 429 -------------------------------------DYIRKQLESKGFILEDYKNPDNG 451
                                                D +R+ L   G  ++D       
Sbjct: 615 GGDMSAEHAVPSKEAKQRQKEERQRLLKERETLLQACDDLRQDLSLYGITIKDRST---- 670

Query: 452 QRMTRWK-QKP 461
              + W+ ++P
Sbjct: 671 --TSTWELREP 679


>gi|313228816|emb|CBY17967.1| unnamed protein product [Oikopleura dioica]
          Length = 636

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 154/522 (29%), Positives = 239/522 (45%), Gaps = 84/522 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             K+K+ N+L R   EF+  D   ++ Y CGPTVYD +H+G+AR  + FD++ R+LR Y+
Sbjct: 18  TPKLKVNNSLTRSKDEFRTADGKTVKWYSCGPTVYDHSHMGHARSYVSFDIIRRILRDYF 77

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G     Y  NITDIDDKII+R+     ++  N     +     +++ +D   L    P  
Sbjct: 78  GYDVF-YQINITDIDDKIIKRS-----TVTDNSIFDALPRYWEKKYFEDMQALNIEDPDC 131

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSF-----SRRKID 171
             R + ++P+++  ++ II HG+AYE+N  + F      +     Y          R+  
Sbjct: 132 LTRVSEYVPEIVTFVEKIIEHGYAYESNGSVYFKVDHFDSSSNHYYAKLVPEAVGNREAL 191

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G+       K++ +DF LWK S P EP W+SPWG+GRPGWHIECS M+S  +GK  
Sbjct: 192 AEGEGSLAAAASEKRSESDFALWKNSKPGEPSWDSPWGKGRPGWHIECSVMASDIMGKTM 251

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS      +     ++H G L + G KMSKS  NFITI E 
Sbjct: 252 DIHSGGVDLKFPHHDNELAQSEAYHANDNWVQYFLHTGHLTIAGCKMSKSLKNFITIKEA 311

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKW----------- 337
           L       +   A  IRL+ L+  + + +D++   L +A   E  +S++           
Sbjct: 312 L-------KKNSARQIRLSFLLHAWDKTLDYSDNTLADAVQYEKAISEFFANIKAALLND 364

Query: 338 ----PQTSTSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTK--NHDLLPI 384
                +    +  +    ++A       L ++LNT  A  AL  +   + K       P 
Sbjct: 365 DGILKKWGAPEKDLHAEFMAAQNDVHDKLCDNLNTAGACLALKDIVSATNKYLAKQENPD 424

Query: 385 FNASAHI-------------------LGIEVCKEHLNKNISIAI----EKLVQERLILLK 421
           F    ++                   +G  V  +  N+N+   +    + L Q R  +  
Sbjct: 425 FKLLRNVGTYVTKIMKCFGCLNSEDQIGFPVEGQAQNQNMDQLVAPYLQCLAQFRQEIRN 484

Query: 422 ----------MKKFSSADYIRK-QLESKGFILEDYKNPDNGQ 452
                      K     D +R  +L   G  LED  +     
Sbjct: 485 TTRGDNSDLSKKLMQMCDDLRDMKLVDLGVRLEDKMDETGKP 526


>gi|209877248|ref|XP_002140066.1| cysteinyl-tRNA synthetase [Cryptosporidium muris RN66]
 gi|209555672|gb|EEA05717.1| cysteinyl-tRNA synthetase, putative [Cryptosporidium muris RN66]
          Length = 591

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 138/428 (32%), Positives = 206/428 (48%), Gaps = 50/428 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + + N+L    TEF  ++   I  Y CGPTVYD AH+G+AR  + FD++ R+L  Y+
Sbjct: 37  TTGLILNNSLTAGKTEFIPVNGKRINWYACGPTVYDSAHLGHARTYVTFDIVRRILEDYF 96

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G      V NITDIDDKII+R+          D    +  +  ++F  D   L    P  
Sbjct: 97  GYDVY-MVMNITDIDDKIIKRS-----IEQKRDNFLDLAREYEKEFFDDMHALNVKPPDI 150

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQ--- 173
             R +  IP+++  I  II  G AYE +  + FD ++  +     YG    + + ++   
Sbjct: 151 ITRVSEFIPEILDYISTIIYRGFAYECDGSVYFDINAFRSKEGHFYGRMEPKSVADESKV 210

Query: 174 --KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
               G        KK+P DF LWK++ P EP W+SPWG+GRPGWHIECSAM+S+ LG   
Sbjct: 211 LEGEGDLGEHSKDKKSPLDFALWKKAKPGEPFWDSPWGKGRPGWHIECSAMASNTLGFPI 270

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++ G KMSKS  NF TI ++
Sbjct: 271 DIHSGGIDLRFPHHDNELAQSEAHYDQPQWVNYFLHSGHLHIHGAKMSKSLKNFTTIRDV 330

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR-LTEAEILLSKWPQTSTS-KGIIDP 349
           L       + +    IR+  L+  +  PI+F+ +  L EA  +   +     + K  +  
Sbjct: 331 L-------KEYSPRHIRMLFLLHKWDGPINFSPETSLKEAVAVDKVFINFFANVKANLRI 383

Query: 350 AVLSA-------------------------LYNDLNTVSAIQALHKLARESTKNHDLLPI 384
           + +                           L ++LNT   I +L  L   +    +    
Sbjct: 384 SFIENPLKHDIEEEKLRLATECAAEKIDKQLRDNLNTPEVISSLQYLVSVANSYMNSRAS 443

Query: 385 FNASAHIL 392
                 IL
Sbjct: 444 NKVVCPIL 451


>gi|307204345|gb|EFN83100.1| Cysteinyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 511

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 149/507 (29%), Positives = 235/507 (46%), Gaps = 76/507 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++ +YN + R          + ++ Y+CGPTVYD AHIG+A   I  D++ R+L  ++
Sbjct: 31  QTEVVVYNPVTRCKVPLILKTKNVLKWYMCGPTVYDSAHIGHATTYIKSDIIRRILTDHF 90

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V  V  ITDIDDKII+ A      +        +  +   +F++D  RL    P  
Sbjct: 91  -NIDVLLVMGITDIDDKIIKCA------LESKQDFKALARRFEMEFLEDMNRLNVREPYI 143

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             R T+++P++++ ++ +I  G+ Y   +  + FDT+    YG  S        + +   
Sbjct: 144 YCRVTDYVPRIVHFVEKLIASGYGYILKDGSVYFDTNKYNRYGKIS--------IPSPDA 195

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               KK+  DF LWK     EP WESPWGRGRPGWHIECSA++S   G   D+H GG+DL
Sbjct: 196 THPDKKSTLDFALWKAGKSDEPFWESPWGRGRPGWHIECSAIASAVFGNSIDVHSGGIDL 255

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKFGG 299
            FPHHENE AQSCC   +++  N W+H G L+L+G  KMSKS  N ++I + L+      
Sbjct: 256 AFPHHENEEAQSCCYHGVDQWVNYWLHCGHLHLKGDVKMSKSLRNTVSIRDYLD------ 309

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDP 349
             + A  +R   L++HYR  I+F+ + +  A  +  K     +            G ID 
Sbjct: 310 -KYSANQLRTLCLLSHYRNGIEFSDEVMQNAVSVTKKIENFISDSDTYTAGKLQAGEIDE 368

Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--------- 391
                     V SAL +D +T  A+ A+  L     K          SA++         
Sbjct: 369 NLLLTNTRSKVDSALADDFDTSRAMHAILNLVGVGNKMFRQSDASPRSANVYGSHASAVA 428

Query: 392 ------------LGIEVCKEHLNKNISIAIEKLVQERLILLKM-----KKFSS---ADYI 431
                        G        ++ +   I+  ++ R  +        K  +     D +
Sbjct: 429 VVSNYVSNTLSKFGFSQSASAKDRQVEEIIDHCLRFRAAVRNRALENPKNDALLKACDNV 488

Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWK 458
           R++L + G +++D K+  +     RWK
Sbjct: 489 REELSTCGILVKDIKDNFSW----RWK 511


>gi|12845041|dbj|BAB26596.1| unnamed protein product [Mus musculus]
          Length = 552

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 156/528 (29%), Positives = 241/528 (45%), Gaps = 95/528 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG                
Sbjct: 147 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKLVNTVPS---ATAEP 203

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+D
Sbjct: 204 AGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGID 263

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 264 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT--- 320

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GII 347
               +   V RL  L T+YR  I+++   L EA+ LL                    G +
Sbjct: 321 ----FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPV 376

Query: 348 DP------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----- 390
           +             AV +AL ND +T  A+  +  L   + +   L  +   ++      
Sbjct: 377 EEDVLWERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQ--LRAVSKEASGPRSPT 434

Query: 391 ILG-----IEVCKEHLNKNIS---------------IAIEKLVQERL------------- 417
           + G     +E   E +  +++                 +++LV+ RL             
Sbjct: 435 VFGAITSYVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAA 494

Query: 418 -ILLK----MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               K     ++    + D +R+ L + G  ++D      G   + W+
Sbjct: 495 GEARKRQLQERQPLLEACDTLRQDLVTHGINVKD-----RGSAASTWE 537


>gi|189409152|ref|NP_077210.1| probable cysteinyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|148690118|gb|EDL22065.1| mCG11180, isoform CRA_a [Mus musculus]
          Length = 552

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 155/526 (29%), Positives = 235/526 (44%), Gaps = 91/526 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG                
Sbjct: 147 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKLVNTVPS---ATAEP 203

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+D
Sbjct: 204 AGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGID 263

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 264 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFLKT--- 320

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GII 347
               +   V RL  L T+YR  I+++   L EA+ LL                    G +
Sbjct: 321 ----FSPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPV 376

Query: 348 DP------------AVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
           +             AV +AL ND +T  A+  +  L   + +                  
Sbjct: 377 EEDVLWERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVF 436

Query: 380 -DLLPIFNASAHILGIEVCKEHLNKNISI------AIEKLVQERL--------------I 418
             ++         +GI +         S        +++LV+ RL               
Sbjct: 437 GAIISYVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGE 496

Query: 419 LLK----MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K     ++    + D +R+ L + G  ++D      G   + W+
Sbjct: 497 ARKRQLQERQPLLEACDTLRQDLVTHGINVKD-----RGSAASTWE 537


>gi|219114520|ref|XP_002176430.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402676|gb|EEC42666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 568

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 160/507 (31%), Positives = 227/507 (44%), Gaps = 77/507 (15%)

Query: 5   IKIYNTLERKITEFQAI--DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++N+  R    F+ +  D + + MY CGPTVYDFAH+GN R  + +DVL R+LRY   
Sbjct: 71  LSLFNSKTRAKEPFRPVRADTNVVSMYTCGPTVYDFAHVGNFRAFLTYDVLKRVLRYLGY 130

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT+V N+TD+DDKII+RA ++       D +  +T +  Q F  D   L        
Sbjct: 131 --HVTHVCNLTDVDDKIIQRANEQKI-----DHVQTLTRRYEQHFRDDLQALNIQPACQY 183

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYG-SFSRRKIDEQKMGTRVP 180
           PRAT HI  M+ LI+ +     AYE  +    F T + P YG    +    E     R  
Sbjct: 184 PRATEHIDDMMDLIRVLRDKELAYETPDGSWYFRTQAQPRYGTQLVQLNYQEMAQTER-G 242

Query: 181 EKYHKKNPADFILWKRSTPM----EPGWESPW-GRGRPGWHIECSAMSSHYLG-KVFDIH 234
           E   K++ ADF LWK         +  WES     GRPGWH+ECSAM+ H+ G    D+H
Sbjct: 243 ESDDKEHFADFCLWKAFKTGVDRMDAAWESNDIALGRPGWHLECSAMARHFFGDDTIDLH 302

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHENEIAQS  A       N W HNGF+N++  KMSKS GNF+T+     T
Sbjct: 303 GGGIDLKFPHHENEIAQSEGATG-NVFCNCWFHNGFVNMDNEKMSKSLGNFLTLRGACPT 361

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------TS 341
                        R   + + YR+ + FT Q +T A   +++  +              S
Sbjct: 362 PD------DVRAYRYLAVSSQYRQALAFTPQAMTAARNAIARMDKIKNQLEECTRVNGAS 415

Query: 342 TSKGIIDPA-----------VLSALYNDLNTVSAIQALHKLARES-------TKNHD--- 380
                 D                A+ +DL+   A  AL  L + +        K  D   
Sbjct: 416 VVDETTDSELPTVARTALENFEVAICDDLSMPRASAALFSLVKAAEGELKRVNKVSDDEV 475

Query: 381 ---------LLPIFNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKM 422
                    +L        + GI         E   +     I   + +LV+ R    + 
Sbjct: 476 SLDYTGLRRILDAMKQMDQVFGIFYRVPVSEEEETAQEEALVIPDDVVELVERRTAAKEA 535

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPD 449
           K +  AD +R Q+   G+ ++D K  D
Sbjct: 536 KDWELADALRSQVTELGYAVKDVKGED 562


>gi|103485844|ref|YP_615405.1| cysteinyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98975921|gb|ABF52072.1| cysteinyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 527

 Score =  411 bits (1057), Expect = e-112,   Method: Composition-based stats.
 Identities = 153/530 (28%), Positives = 237/530 (44%), Gaps = 89/530 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L R++  F+ + P   R+Y CGPTVY++ HIGN R  +  D L R L +  
Sbjct: 11  SPPLRLFNSLTRRLETFEPVHPGEARVYSCGPTVYNYPHIGNMRAYVFADTLGRTLSFKG 70

Query: 62  GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  +T+V NITD+    DD      + E  +     +I  I    T+ +  D   L   
Sbjct: 71  YK--LTHVINITDVGHLTDDADAGEDKLEKAAAEKAQSIWDIARHYTEAYWADVKALNIR 128

Query: 118 AP--------THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
            P         H   AT+++PQMI   + I    H YE ++ + FDTS++ +YG  +R  
Sbjct: 129 GPMKAGKPEAAHWSIATDYVPQMIEFAKAIADK-HCYELDSGLYFDTSTVADYGRLARHA 187

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHY 226
            DE +  +R+     K++PADF +W+++ P E     W+SPWG+G PGWH+ECS MS   
Sbjct: 188 TDEGE--SRIDPVDGKRHPADFAIWRKTPPGETRQMEWDSPWGKGAPGWHLECSVMSEAL 245

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADR-IEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           LG  FDIH GG+D    HH NEIAQ+       +  A IW+HN FL     KMSKS G F
Sbjct: 246 LGFPFDIHTGGIDHREIHHPNEIAQNQARSCSTDSGARIWMHNNFLVERSGKMSKSAGEF 305

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------- 336
           + +  L++      + +     RL  L  HYR  ++F+ + L  A   L +         
Sbjct: 306 LRLQLLID------KGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRLVMAVQRTK 359

Query: 337 ----------WPQTSTSKGIIDP-------------------AVLSALYNDLNTVSAIQ- 366
                     + +   S G++D                        A+ NDLNT SA   
Sbjct: 360 EAATLSEWKPFKKYLRSPGMVDDYIDSINETDEWFDFTGILGEFDDAISNDLNTASAFPT 419

Query: 367 ----ALHKLARESTKN-----HDLLPIFNASAHILGIEVCK---------EHLNKNISIA 408
               AL KL  E+  +      + L +      I G+ + +                   
Sbjct: 420 SEKLALTKLVEEAVTDPFIQLDNRLRLIATMDQIFGLRLLELDRIDLRIRPKTATITESE 479

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IE ++  R      K F+++D +R +L + G  + D  +P        W+
Sbjct: 480 IEAILTRRKEARAAKDFATSDKLRDELIAAGVEVMDG-DPLGWD----WR 524


>gi|189234350|ref|XP_973716.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 501

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 158/493 (32%), Positives = 229/493 (46%), Gaps = 70/493 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              IK++N   R        + + +  Y CGPTVYD +HIG+A   +  D++ RLLR+Y+
Sbjct: 23  DTGIKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKLDIIQRLLRHYF 82

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT V NITDIDDKII RA               +  K   +F KD   L    P  
Sbjct: 83  NLNVVT-VMNITDIDDKIIARANTAKVP------PKELAKKFEAEFWKDLDALDVRRPDC 135

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             R T ++  +   I+ +I  G AY+A +N + FD  +  NY          Q +G   P
Sbjct: 136 VLRVTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYDNYAKL-------QNIGEDAP 188

Query: 181 EKYH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           E    KK+  DF LWK + P E  W S WG+GRPGWHIECSA++ H LG   DIH GG+D
Sbjct: 189 EPSKFKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHVLGPEIDIHAGGID 248

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFG 298
           L FPHHENE AQSC      +  N W+H G L+L + +KMSKS  N I+I+ +LE     
Sbjct: 249 LRFPHHENEEAQSCARYCRPQWVNYWLHTGHLHLKDSQKMSKSLHNTISISSMLEDT--- 305

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDP 349
                AP  R+A LM+HYR  ++++ + +  A  +L  +     +         K  +D 
Sbjct: 306 ----TAPAFRMACLMSHYRSRMEYSNEFVITASKVLQNYINFVDNCQNYLNGYLKADVDN 361

Query: 350 A------------VLSALYNDLNTVSAIQALHKLARESTKNH-----DLLP--------- 383
                        + SAL +D NT   I  +++L             DL           
Sbjct: 362 DTVSKLVVESANKIHSALIDDFNTSEVISTINELISAVNSILHSSRTDLCDTKSVAVIAA 421

Query: 384 --IFNASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLK----MKK---FSSADYIR 432
             + +++ ++ GI V K+  +   N    +  L   R  + +     K        D +R
Sbjct: 422 SNLVSSTLNMFGINVNKKQSSVCDNYVEVMNILNDFRQSIRQLGISNKDKNVLELCDKVR 481

Query: 433 KQLESKGFILEDY 445
             L+S G  ++D+
Sbjct: 482 DNLKSIGITIKDH 494


>gi|197294544|ref|YP_001799085.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853871|emb|CAM11833.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 439

 Score =  410 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 142/459 (30%), Positives = 222/459 (48%), Gaps = 43/459 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L  +  +F  + P ++ MYVCGPTVY+  H+GNARP+I F+ + + L     + 
Sbjct: 2   LKIYNSLTNQKEDFIPLSPPDVNMYVCGPTVYNHLHLGNARPLIFFNTVKKYLETIGFK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDKII+ + Q+           ++  +    F++    L        P+
Sbjct: 61  -VFYVVNITDIDDKIIKSSLQKQTKE------EVLAKEYISSFLQLLKDLNIETINSHPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           ATN+IP MI  I+ ++  G AY  +  I F+ S I +YG    + + + K   R     +
Sbjct: 114 ATNYIPSMIEYIKVLLDKGFAYFTDQGIYFEISKISDYGQLKNQDLTQLKKNARKTLDPN 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK P DF+LWK+++     ++SPW  GRPGWH EC  M         DIHGGG DL FPH
Sbjct: 174 KKKPGDFVLWKKTSQG-VQYQSPWFCGRPGWHTECVTMIEQIFKTSLDIHGGGADLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NEIAQ+    +    AN ++H   L+ E +KMSKS GN +   +LL       + + +
Sbjct: 233 HQNEIAQAKAY-KNNNLANFFMHVARLDFENQKMSKSLGNIVWCKDLL-------KRFSS 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------IIDPAVLS 353
            VI+  +L THYR+PI+F+   + +++    K                     ++P ++ 
Sbjct: 285 SVIKFFILSTHYRKPINFSENLIKQSQKKYDKIMLFLIKNDFYLQIKKKPIVDLEPKIID 344

Query: 354 A----LYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------SAHILGIEVCKEHLN 402
           +    + +D +T   I  +    +E+ +    L               +LGIE       
Sbjct: 345 SFHRLMKDDFSTNKVIDLIEINIKEAYQKQQDLDFLAKIHKSLLWILDVLGIEPQFFRAE 404

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K           +     + K F  AD++RK+L  K  +
Sbjct: 405 KKDFETY----VKWQEARQNKDFKQADFLRKELIDKNLL 439


>gi|13938199|gb|AAH07220.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Homo
           sapiens]
          Length = 564

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 150/529 (28%), Positives = 229/529 (43%), Gaps = 98/529 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 49  ETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 108

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT 
Sbjct: 109 GC-SIVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTV 161

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II  G+AY  A   + FD  S  + YG                
Sbjct: 162 YLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPGPVG----E 217

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+D
Sbjct: 218 PADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGID 277

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + E+  N ++H+G L+ +G   KMSKS  N+ITI + L+T   
Sbjct: 278 LAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKT--- 334

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLS-------- 335
               +   V R   L + YR  ID++                 L +A   +         
Sbjct: 335 ----FSPDVFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSV 390

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
           +             AV +AL +D +T   + A+  LA                       
Sbjct: 391 REAMLWERLSSTKRAVKAALADDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVF 450

Query: 380 -DLLPIFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++  F      +GI +  +           +   +++LV+ R  + +   F+ A    
Sbjct: 451 GAIISYFEQFFETVGISLANQQYVSGDGSEATLHGVVDELVRFRQKVRQ---FALAMPEA 507

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                              D +R+ L + G  ++D  +  +      W+
Sbjct: 508 TGDARRQQLLERQPLLEACDTLRRGLTAHGINIKDRSSTTS-----TWE 551


>gi|13375695|ref|NP_078813.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|74761587|sp|Q9HA77|SYCM_HUMAN RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|10433519|dbj|BAB13978.1| unnamed protein product [Homo sapiens]
 gi|55957407|emb|CAI17004.1| novel protein [Homo sapiens]
 gi|55957784|emb|CAI16971.1| novel protein [Homo sapiens]
 gi|119629531|gb|EAX09126.1| hypothetical protein FLJ12118 [Homo sapiens]
          Length = 564

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 150/529 (28%), Positives = 229/529 (43%), Gaps = 98/529 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 49  ETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 108

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT 
Sbjct: 109 GC-SIVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTV 161

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II  G+AY  A   + FD  S  + YG                
Sbjct: 162 YLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPGPVG----E 217

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+D
Sbjct: 218 PADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGID 277

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + E+  N ++H+G L+ +G   KMSKS  N+ITI + L+T   
Sbjct: 278 LAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKT--- 334

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLS-------- 335
               +   V R   L + YR  ID++                 L +A   +         
Sbjct: 335 ----FSPDVFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSV 390

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
           +             AV +AL +D +T   + A+  LA                       
Sbjct: 391 REAMLWERLSSTKRAVKAALADDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVF 450

Query: 380 -DLLPIFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++  F      +GI +  +           +   +++LV+ R  + +   F+ A    
Sbjct: 451 GAIISYFEQFFETVGISLANQQYVSGDGSEATLHGVVDELVRFRQKVRQ---FALAMPEA 507

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                              D +R+ L + G  ++D  +  +      W+
Sbjct: 508 TGDARRQQLLERQPLLEACDTLRRGLTAHGINIKDRSSTTS-----TWE 551


>gi|323453109|gb|EGB08981.1| hypothetical protein AURANDRAFT_37286 [Aureococcus anophagefferens]
          Length = 660

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 159/542 (29%), Positives = 232/542 (42%), Gaps = 106/542 (19%)

Query: 2   KKKIKIYNTLERKITEFQAIDP-SNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           K ++ IYN+L R    F  +DP   +  MYVCGPTVYD AH+G+AR  + FDV+ R+LR 
Sbjct: 24  KPQLMIYNSLTRSKVPFVPMDPLGKVITMYVCGPTVYDAAHLGHARTYLQFDVMRRILRD 83

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             G   V YV N+TD+DDKII R+ +         +   +  +    F++D T L    P
Sbjct: 84  ALGYD-VNYVMNVTDVDDKIIMRSAER------GVSPETLAREWEHAFLEDMTSLGVERP 136

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSF------SRRK 169
           T  PR T ++P+++  ++ I+ +G AY     + FDT +      +YG        S   
Sbjct: 137 TSMPRVTEYVPEIVAFVEKIVANGFAYADQGSVYFDTVAFGKAGYDYGKLVPESIGSAEL 196

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           + E +    +     KK+P DF LWK S P EP W SPWG GRPGWHIECSAM  + +G 
Sbjct: 197 MAESEGKLGILLGGGKKDPRDFALWKASKPGEPTWPSPWGDGRPGWHIECSAMIDNTIGS 256

Query: 230 V--------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                     DIHGGG+DL FPHH+NE+AQ       ++T N + H G L++ G KMSKS
Sbjct: 257 GGVGGAAGCIDIHGGGVDLRFPHHDNELAQGEAFCACKQTVNYFAHTGHLHIRGLKMSKS 316

Query: 282 NGNFITINELLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
             NFITI + L       G        +RL   +  Y  P D++   L  A ++  K+ +
Sbjct: 317 LKNFITIGQALAGLEGVEGSEPVHPRTMRLMFCLVSYNAPCDYSDNMLANARVVEKKFKE 376

Query: 340 TSTSKGII-----------------DPAVLSAL-----------YNDLNTVSAIQALHKL 371
              +                     D  +L+AL            +D +T  A+ AL  L
Sbjct: 377 YFLNVAAALRPLDADPDSRQKLCAEDKELLAALKKAQDTVYARFLDDFDTPGAVLALQTL 436

Query: 372 ARESTKNHDLLPIFNAS-------------------AHILGIEVC--------------- 397
              ++          AS                     +LG+E                 
Sbjct: 437 VDTTSAYLQKFDAKQASRAVPCSLALCATARYVGETLDLLGLEGLCADDVLRRLKLTPSH 496

Query: 398 -------KEHLNKNISIAIEKLVQERLILLKMKK-------FSSADYIRKQ-LESKGFIL 442
                         +   ++ +   R  +    +        +  D +R   L + G  L
Sbjct: 497 KPAAALGSGDAAAALGPLLDVIAAFRDDVRAAGREGDTQQVLALCDALRDDALPALGVRL 556

Query: 443 ED 444
           ED
Sbjct: 557 ED 558


>gi|298527059|ref|ZP_07014468.1| cysteinyl-tRNA synthetase 1 [Mycobacterium tuberculosis 94_M4241A]
 gi|298496853|gb|EFI32147.1| cysteinyl-tRNA synthetase 1 [Mycobacterium tuberculosis 94_M4241A]
          Length = 384

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 127/346 (36%), Positives = 187/346 (54%), Gaps = 19/346 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++++T    + +F  + P ++ +Y+CG TV    HIG+ R  + FD+L R L    
Sbjct: 4   RARLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARG 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V ++RN+TDI+DKI+ +A                 + + + F      L  L P+ 
Sbjct: 64  YD--VAFIRNVTDIEDKILAKAAA------AGRPWWEWAATHERAFTAAYDALDVLPPSA 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT HI QMI +I+ +I  GHAY    ++ FD  S P YG  S  KID+   G  V  
Sbjct: 116 EPRATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA- 174

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK   P EP W +PWGRGRPGWH+ECSAM+  YLG  FDIH GG+DL+
Sbjct: 175 -AGKRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLV 233

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENEIAQS  A      A  W+HNG++ + G KMSKS GN +++  +L+  +     
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR----- 286

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
                +R  +   HYR  ++F+   + +A          + S    
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVALADRTLSFADF 330


>gi|153824225|ref|ZP_01976892.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518251|gb|EAZ75476.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 263

 Score =  408 bits (1050), Expect = e-112,   Method: Composition-based stats.
 Identities = 128/271 (47%), Positives = 174/271 (64%), Gaps = 10/271 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           HHENEIAQSCCA    +  N W+H+G + ++
Sbjct: 234 HHENEIAQSCCAHDT-QYVNTWMHSGMVMVD 263


>gi|309789812|ref|ZP_07684391.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308228116|gb|EFO81765.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 397

 Score =  408 bits (1049), Expect = e-111,   Method: Composition-based stats.
 Identities = 143/410 (34%), Positives = 202/410 (49%), Gaps = 37/410 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R+   F       + +YVCG T YD  HIG+AR  ++FD+L R LR+   E 
Sbjct: 1   MRLYNSLSREKDRFVLPADRPVTLYVCGVTPYDTTHIGHARTFLIFDLLVRFLRWQGAE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N+TD+DD + ERA ++            + +  T+Q + D   L  + PT+ PR
Sbjct: 60  -VRYCQNVTDVDDPLFERAARDGVKW------QDLAATQTEQLLADYAALNIIMPTYFPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           A+  I  MI +I+ +I  GHAY     + F   + P++G  +R   DE           P
Sbjct: 113 ASEEIGTMIPIIERLIELGHAYVIEGNVYFSVQTDPDFGKMARMGYDELLAVANQRGNKP 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++P DF+LW+   P +P W SPWG GRPGWHIECSAM++ YLG   DIHGGG DL
Sbjct: 173 DDPLKRDPLDFVLWQTGKPGDPTWPSPWGPGRPGWHIECSAMATRYLGAQIDIHGGGADL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHH  EIAQ            IW+H G + L+G KMSKS GN +   + L       +
Sbjct: 233 IFPHHPCEIAQIEPVTGKRPFVQIWMHTGLVWLDGEKMSKSLGNLVFARDAL-------K 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPA 350
              A  +R  +   HYR+  D+           V  L  A   +S               
Sbjct: 286 EHSADTLRWYLFSQHYRQEFDYQRAEVANAAEAVALLHTALDAVSG-DGAPLDPDASRAE 344

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILG 393
            L+AL +DLNT +A+  LH +AR +                 +  A I G
Sbjct: 345 FLAALEDDLNTPTALAVLHLMARNTISAAADGANVVAYQQTLHELAQIFG 394


>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 399

 Score =  408 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 142/399 (35%), Positives = 200/399 (50%), Gaps = 65/399 (16%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              L CL P+ +PR ++HI Q+I +I+ II +  AY    ++ F   + P YG  S RK+
Sbjct: 1   MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 60

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           D+ + G RV     KKNPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  
Sbjct: 61  DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 120

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG DLIFPHHENEIAQS  A       N WIHNGF+N+  +KMSKS GNF+TI +
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAACCDSS-INYWIHNGFVNVNSQKMSKSLGNFVTIRK 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---- 346
           + E        +    +R+ +L THYR PI++T+++L  A   L    QT          
Sbjct: 180 VTEL-------YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLQDCEESCQQ 232

Query: 347 -------------------IDPAVLSALYNDLNTVSAIQALHKLAREST---------KN 378
                              +     +++ +DL+T  A+ A+ +  +            K 
Sbjct: 233 HQSKAGDPLPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQ 292

Query: 379 HDLLPIFNAS-------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLIL 419
              L   +A          +LG+      E  ++   K +         + + ++ER   
Sbjct: 293 EKRLESLSAMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSA 352

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            K K++  +D IRK+L + G  L D      G   T W+
Sbjct: 353 RKAKQYEKSDEIRKELAAVGIALMD------GPDGTTWR 385


>gi|260753260|ref|YP_003226153.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552623|gb|ACV75569.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 516

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 154/516 (29%), Positives = 226/516 (43%), Gaps = 76/516 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            +N+L +KI  F  IDP  +R+Y CGPTVY+FAH+GN R  +  D L R+L +      V
Sbjct: 10  FFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWKGY--PV 67

Query: 67  TYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V NITD+     D      + E  +      I  +    T+ F  D   L    PT  
Sbjct: 68  NHVINITDVGHLTSDSDTGDDKMEAAAHKAQKTIWDVARFYTEAFWSDLKNLNIFNPTIW 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
             AT+HI  MI   + I   G  Y+ ++ + FDTS +  YG  +  +  E +   R+   
Sbjct: 128 SIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGVGRIETV 185

Query: 183 YHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             KK+PADF LW+RS+P E     W SPWG G PGWH+ECS MS  YLG+ FDIH GG+D
Sbjct: 186 AGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDIHTGGID 245

Query: 240 LIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
               HH NEIAQ+      ++   AN W+HN FL     KMSKS G+F+T++ L+E    
Sbjct: 246 HREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTLIEA--- 302

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKGI 346
                     R+  L  HYR  ++F+   +  A   L +             +   + G 
Sbjct: 303 ---GIHPLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKKVVADGE 359

Query: 347 ID-----------------------------------PAVLSALYNDLNTVSAIQALHK- 370
            D                                        A+ NDL    A+  L + 
Sbjct: 360 PDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILERFDQAVSNDLMLPQALPLLEET 419

Query: 371 LARESTKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLK 421
           L  +  +  + L +  +   ILG+ +          +          +  L++ER +  K
Sbjct: 420 LGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLALLEERQLKRK 479

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            K F+++D IR +L   G  + D  +P   +    W
Sbjct: 480 EKDFAASDAIRDRLSEAGIDVLDG-DPLGWEWRPEW 514


>gi|328876354|gb|EGG24717.1| cysteinyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 628

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 155/516 (30%), Positives = 236/516 (45%), Gaps = 79/516 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
              + I N+L     EF     +  +  Y+CGPTVYD +H+G+AR  I FDV+ R++R Y
Sbjct: 27  PSGLFINNSLTMSKNEFVPSSGTKDVSWYICGPTVYDASHMGHARSYISFDVIRRIMRDY 86

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            G   + YV NITDIDDKII RAR+           + ++      F +D   L  L P 
Sbjct: 87  MGFN-IMYVMNITDIDDKIIIRARER------GITHTELSRACEASFFEDMKALNVLPPD 139

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSF-----SRRKIDE 172
              R T +I +++  ++ II +G AYE+N  + FDT   S   +YG          K++ 
Sbjct: 140 ALTRVTEYITEIVTFVEKIIENGFAYESNGSVYFDTVAYSKQHDYGKLDPNAVGNEKLNS 199

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
           +  G        K+N  DF LWK+S  +EP W SPWG GRPGWHIECSAM+S  LG   D
Sbjct: 200 EGEGALSAAVSEKRNNNDFALWKKSKELEPKWNSPWGEGRPGWHIECSAMASDILGPNID 259

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG DL FPHH+NEIAQS    + ++  N +IH+G L ++G KMSKS  NFITI E L
Sbjct: 260 IHSGGEDLKFPHHDNEIAQSEAHYKCKQWINYFIHSGHLLIDGSKMSKSLKNFITIQEAL 319

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKW------------ 337
                  + + A  +R+  L+  Y +P++++V+ +T A   E + +++            
Sbjct: 320 -------KKYTARQMRMLFLIHKYDKPMNYSVESMTNAIEIEKIFTEFFHLVKGIIRSTS 372

Query: 338 ----PQTSTSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTKNHD------ 380
                    +   ++  +  A       + ++ NTV  I  L +L  +S    +      
Sbjct: 373 IAGEQNWEKADKELNAELQQAKRDVDKFIMDNFNTVDVIHRLKELISKSNIYINDKSRAP 432

Query: 381 -------LLPIFNASAHILGI-------------EVCKEHLNKNISIAIEKLVQERLILL 420
                  +         + G+                +E +       ++   Q R + +
Sbjct: 433 RVAIIQGVADYVTYILRVFGLTEAGGVGFGVAGEGNVEETMTPMFDAIVDFRNQMRSLAI 492

Query: 421 KM---KKFSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
                K   + D  R   L   G  ++D       +
Sbjct: 493 AKDTTKILQACDSFRDDVLPLHGVKIDDRATGSTWK 528


>gi|294013315|ref|YP_003546775.1| cysteinyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676645|dbj|BAI98163.1| cysteinyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 509

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 143/509 (28%), Positives = 226/509 (44%), Gaps = 68/509 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L R +  F  I P++ R+Y CGPTVY++AH+GN R  +  D L R L +  
Sbjct: 13  DAPLRLFNSLTRAVEPFAPIQPNHARVYSCGPTVYNYAHLGNLRAYVFTDTLRRTLLWKG 72

Query: 62  GEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  VT++ NITD+     +      + E  +     +I  I +  T  F ++   L  +
Sbjct: 73  LD--VTHIINITDVGHLTSDADAGDDKMEAAARAQAKSIWDIAAHYTDAFKRNIADLNII 130

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P+    AT+++PQMI   + I    H YE  + + FD+SS+P+YG+ +  + D      
Sbjct: 131 PPSEWTVATDYVPQMIAFAEKI-APAHCYELESGLYFDSSSVPDYGALAGGRDDA--AHA 187

Query: 178 RVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+     K+NP+DF +W++S P E     W+SPWG+G PGWH+ECS MS   LG  FDIH
Sbjct: 188 RIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSEARLGHPFDIH 247

Query: 235 GGGLDLIFPHHENEIAQSCCADR----------IEKTANIWIHNGFLNLEGRKMSKSNGN 284
            GG+D    HH NEIAQ+                   A  W+HN FL     KMSKS G 
Sbjct: 248 TGGIDHREIHHPNEIAQNQAFHGCCGEADAAAAGFTGARWWMHNNFLVDRQGKMSKSKGG 307

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
           F T+  L++              RL  L  HYR  ++F+ + ++ A   L +        
Sbjct: 308 FTTLFSLIDA------GVHPLAYRLLCLGAHYRSELEFSAESVSAALTRLKRLVMGVENL 361

Query: 338 ------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARESTKN 378
                                      +     +A+ +DL T  A+  L + +A +    
Sbjct: 362 KARAEGVTWQSLRLDWLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEETIAMKKVPV 421

Query: 379 HDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
            + L +  A    LG+ +          +    +     IE  +  R      K F+ +D
Sbjct: 422 DEKLCLLAAFDQALGLNLLTIGRADLRIQPRDAQIAPEEIEAELDHRQAARAEKDFALSD 481

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            IR  L ++G  + D  +P        W+
Sbjct: 482 EIRDALIARGVEVMDG-DPLRWD----WR 505


>gi|56551082|ref|YP_161921.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|61216128|sp|Q5NR44|SYC_ZYMMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56542656|gb|AAV88810.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 516

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 154/516 (29%), Positives = 226/516 (43%), Gaps = 76/516 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            +N+L +KI  F  IDP  +R+Y CGPTVY+FAH+GN R  +  D L R+L +      V
Sbjct: 10  FFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWKGY--PV 67

Query: 67  TYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V NITD+     D      + E  +      I  +    T+ F  D   L    PT  
Sbjct: 68  NHVINITDVGHLTSDSDTGDDKMEAAAHKAQKTIWDVARFYTEAFWSDLKNLNIFNPTIW 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
             AT+HI  MI   + I   G  Y+ ++ + FDTS +  YG  +  +  E +   R+   
Sbjct: 128 SIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGVGRIETV 185

Query: 183 YHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             KK+PADF LW+RS+P E     W SPWG G PGWH+ECS MS  YLG+ FDIH GG+D
Sbjct: 186 AGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDIHTGGID 245

Query: 240 LIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
               HH NEIAQ+      ++   AN W+HN FL     KMSKS G+F+T++ L+E    
Sbjct: 246 HREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTLIEA--- 302

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKGI 346
                     R+  L  HYR  ++F+   +  A   L +             +   + G 
Sbjct: 303 ---GIHPLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKKVVADGE 359

Query: 347 ID-----------------------------------PAVLSALYNDLNTVSAIQALHK- 370
            D                                        A+ NDL    A+  L + 
Sbjct: 360 PDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILERFDQAVSNDLMLPQALPLLEET 419

Query: 371 LARESTKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLK 421
           L  +  +  + L +  +   ILG+ +          +          +  L++ER +  K
Sbjct: 420 LGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLALLEERQLKRK 479

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            K F+++D IR +L   G  + D  +P   +    W
Sbjct: 480 EKDFAASDAIRNRLSEAGIDVLDG-DPLGWEWRPEW 514


>gi|148553156|ref|YP_001260738.1| cysteinyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498346|gb|ABQ66600.1| cysteinyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 510

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 153/506 (30%), Positives = 219/506 (43%), Gaps = 67/506 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + ++++L R    F  IDP+ +R+Y CGPTVY+FAH+GN R  +  D L R L +    
Sbjct: 10  PLMLFDSLTRSTRAFAPIDPAMVRLYSCGPTVYNFAHLGNLRAYVFTDTLRRTLNWKG-- 67

Query: 64  KCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             V +V NITD+     +      + E  +      I  I +  T  F  D   L  +AP
Sbjct: 68  WPVNHVINITDVGHLTSDADEGDDKMEAAAKKAARTIWEIAAFYTDAFKADLRDLNIIAP 127

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T    AT+HI  MI   + I   G +YE +  + FDTS +P+YG  +  + DE     R+
Sbjct: 128 TLWSVATDHIQDMIAFARTIEAAGASYELDGGLYFDTSKVPDYGRLAGARGDE--TVGRI 185

Query: 180 PEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
            E   K+N ADF LW+RS   E     W SPWG G PGWH+ECS MS  YLG  FDIH G
Sbjct: 186 AEVEGKRNAADFALWRRSATGEQRQMEWMSPWGPGAPGWHLECSVMSMKYLGSQFDIHTG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           G+D    HH NEIAQ+          AN W+HN FL   G KMSKS G F T+  +++  
Sbjct: 246 GIDHREIHHCNEIAQNQAFTGTAASGANFWMHNNFLVDRGGKMSKSKGGFATLAGVID-- 303

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----PQTSTSKGIIDP-- 349
               +       RL  L  HYR  ++F+ + L  A   L++      Q     G  D   
Sbjct: 304 ----KGVHPLAYRLLCLSAHYRSELEFSPEALASALTRLTRLVLAAQQLRDKAGDPDWLR 359

Query: 350 ---------------------------------AVLSALYNDLNTVSAIQALH-KLARES 375
                                                AL NDL     +  L   +A ++
Sbjct: 360 LIDETGASKGASFAYQRSVVEAGLGAKAHALIVQFDEALSNDLMVPQTLPLLETAIADKA 419

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNI---------SIAIEKLVQERLILLKMKKFS 426
               + L +  +    LG+ + +                   IE L+++R      K ++
Sbjct: 420 IPAEERLRLLASMDLALGLGLLRLRRVDLRLRPADARIGDDEIEALIEQRQAARADKDYA 479

Query: 427 SADYIRKQLESKGFILEDYKNPDNGQ 452
           ++D IR +L  +G  + D        
Sbjct: 480 ASDRIRDELAERGVSVMDGAGDMRWD 505


>gi|298711628|emb|CBJ32684.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 663

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 145/536 (27%), Positives = 229/536 (42%), Gaps = 101/536 (18%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K++N+L R  T F   D + +  Y+CGPTVY  +H+G+AR  + FD+L R++  ++G 
Sbjct: 39  PLKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTDFFGY 98

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V+   NITDIDDKII RA +             + +   + +++D   L   APT   
Sbjct: 99  D-VSLCMNITDIDDKIITRANE------GGQNYRELAAHFEEDYMQDMALLGVRAPTVVT 151

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSF-----SRRKIDEQ 173
           R +  IP+++  IQ II +G+AYE+N  + F+  S        Y           ++  +
Sbjct: 152 RVSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAE 211

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL---GK- 229
             G        K++  DF LWKRS   EP W SPWG GRPGWHIECS M+S      G  
Sbjct: 212 GEGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDG 271

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+DL FPHH+NE+AQ+       +  N ++H G L+++G KMSKS  NFITI 
Sbjct: 272 TMDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIK 331

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLS 335
           + L+             IRL  L+  Y  P+D+    ++ A              +  L 
Sbjct: 332 QALQEN-------SPRQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALR 384

Query: 336 KWPQTSTSK------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
           +      ++                  V   L +D++T  A+ AL +L +   K  +   
Sbjct: 385 RTTARDPARTKEPELALMSSLSDAKKEVKKCLCDDVDTPGAMGALQELVKNVNKYIEAKE 444

Query: 384 I----------------FNASAHILGI-----------------------EVCKEHLNKN 404
                                  + G+                       E  +      
Sbjct: 445 RAGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQVGDAGVGGDASGEGGEASREAI 504

Query: 405 ISIAIEKLVQERLILL---KMKK----FSSADYIRKQLE-SKGFILEDYKNPDNGQ 452
           +   ++ L + R  +    +        ++ D++R++L    G  LED  +    +
Sbjct: 505 LGPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWK 560


>gi|242024681|ref|XP_002432755.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212518240|gb|EEB20017.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 530

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 145/506 (28%), Positives = 235/506 (46%), Gaps = 70/506 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  IKIYN ++ +      ++ + ++ Y+CGPTVY+ +H+G+A   + FD++ R+L   +
Sbjct: 38  ETDIKIYNKIKNEKVPLILLNKNFVKWYLCGPTVYNSSHVGHASTYVRFDIIRRILEQNF 97

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V     ITDIDDKII++A     +         +  K   +F K+   L  L+PT 
Sbjct: 98  GIRPVV-ALGITDIDDKIIKKANLLSTN------FKTLAKKYELEFFKNLKDLNVLSPTF 150

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             R ++HIP +I  I  I+    AY +    + FDT+S   YG  +   ++        P
Sbjct: 151 VLRVSDHIPHIIDFIYKIVDKRQAYVSKEGCVYFDTASFGKYGKLNPIPLEN-----SDP 205

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
            +  KK+  DF LWK + P EP W+SPWG GRPGWHIECSAM+S   G   D+H GG+DL
Sbjct: 206 VRIGKKSYLDFTLWKAAKPGEPFWDSPWGNGRPGWHIECSAMASEIFGSKMDLHSGGIDL 265

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE AQSC     ++  N W+H+G L ++  KMSKS  NFITI+E L       +
Sbjct: 266 KFPHHENEEAQSCSYHDCDQWVNYWLHSGQLMIDDEKMSKSLNNFITIDEFL-------K 318

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------------KWPQTSTSKG 345
           ++ +  +R+    +HYR  + ++ + +  A    +                W + +  + 
Sbjct: 319 TYSSDHMRMFCFESHYRNALHYSSESMKTAVSTCNLFSDFLMDANSYIKSNWYKGNVEES 378

Query: 346 IIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHD--------------------LL 382
           II      +   L +D NT   + +L  L + + +  +                    + 
Sbjct: 379 IILKMSNVIKDCLMDDFNTSQCLISLMNLTKNTVRMMNEEVTVTSSRSPGAVAAVKTYVE 438

Query: 383 PIFNASAHILGIEVCKEHLNK-----NISIAIEKLVQERLILLKMKK-------FSSADY 430
            +  +    L   + +E  +       ++ AI    + R   L +K          S D 
Sbjct: 439 GLLKSFGFQLDTALSQEGEDDIKMEFILNSAINFRQEVRKEALALKDKTLKGNLLKSCDS 498

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTR 456
            R+ L + G  L+D +       +  
Sbjct: 499 FRENLGTVGITLKDQEKNATSWGIKT 524


>gi|66807293|ref|XP_637369.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996749|sp|Q54KR1|SYCC_DICDI RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|60465778|gb|EAL63854.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 660

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 150/519 (28%), Positives = 241/519 (46%), Gaps = 90/519 (17%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           + ++ I N+L      F   +      +  Y CGPTVYD +H+G+AR  I FD++ R+++
Sbjct: 33  ETELLINNSLTGGKVPFVFNESGKGRSLTWYACGPTVYDASHMGHARTYISFDIIRRIMK 92

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            Y G   + YV NITDIDDKII RA +         + S ++ K    F +D   L  L 
Sbjct: 93  NYLGFN-IQYVMNITDIDDKIIIRANEN------GISHSDLSKKWETAFFEDMKLLNVLP 145

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQKM 175
           P    R T ++PQ++  ++ II +G AYE+N  + FDT   S   +YG      +  +K+
Sbjct: 146 PDALTRVTEYVPQIVEYVEKIISNGFAYESNGSVYFDTVAFSKAHDYGKLEPNSVGNEKL 205

Query: 176 GTRVPEK-------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
                           K++  DF LWK+S P EP W SPWG GRPGWHIECSAM+S  LG
Sbjct: 206 AAEGEGSLTATSAVSEKRSGFDFALWKKSKPGEPVWNSPWGEGRPGWHIECSAMASDLLG 265

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
              DIH GG DL FPHH+NE+AQS       +  N ++H+G L ++G KMSKS  NFITI
Sbjct: 266 GNIDIHSGGSDLKFPHHDNELAQSEAFYGNRQWINYFVHSGHLLIDGLKMSKSLKNFITI 325

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKWPQTST--- 342
            + LE        + +  +R+  ++  Y + ++++ + +  A   E    ++  T+    
Sbjct: 326 KQALE-------KYTSRQMRMFFILHKYDKAMNYSPESMGYAIEMEKTFVEFFHTAKQIL 378

Query: 343 -------------SKGIIDPAVLSALY-------NDLNTVSAIQALHKLAREST------ 376
                        ++  ++  + +A         ++ NT  A++ L  L  ++       
Sbjct: 379 RDSPLSLPQFWTQAEKDLNKHLQNANDQVHQFILDNFNTSDALKTLSDLVNKTNVYIRSC 438

Query: 377 ---KNHDLLPIFNASAH-------ILGI-------------EVCKEHLNKNISIAIEKLV 413
              K +  L + +A A        + G+                K ++ + ++  +  L 
Sbjct: 439 AEQKTNPRLNLISAIAEYITYIFSVFGLTESSTASSMIGFGSAGKGNIEEEMTPILNALT 498

Query: 414 QERLILLK---MKK----FSSADYIRKQ-LESKGFILED 444
           Q R  +      K       + D +R + L   G  ++D
Sbjct: 499 QFRSEVRASAIAKDTTSILKTCDNLRDEVLPLLGVKIDD 537


>gi|289064335|gb|ADC80543.1| cysteine aminoacyl-tRNA synthetase [Toxoplasma gondii]
          Length = 904

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 138/480 (28%), Positives = 214/480 (44%), Gaps = 82/480 (17%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++   Y 
Sbjct: 245 TGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YL 303

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITDIDDKII+R+               +     ++F  D T L    PT  
Sbjct: 304 NYDVTMCMNITDIDDKIIKRS------TEQGVDFLTLARHWEKEFFNDMTALNVRLPTVV 357

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQ---- 173
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +        YG      + ++    
Sbjct: 358 TRVSEYIPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVL 417

Query: 174 -KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
              G        K++P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L    D
Sbjct: 418 EGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLD 477

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI E L
Sbjct: 478 IHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECL 537

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEAEI------------------ 332
                    + A  IRL  LM  +   ++++   + + +A                    
Sbjct: 538 SR-------FTARQIRLLCLMNRWDSFMNYSPDGETMQQAVDVDRAFDNFFALVKAKLRD 590

Query: 333 ----------------LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
                            L++  + +  +      V  A+ ++ NT  A+ AL  L   + 
Sbjct: 591 ATPVSDYAQKWTSDDFALNETLRATKEQASASAGVHKAILDNFNTPEALVALQHLMSAAN 650

Query: 377 KNHD-------LLPIFNA-------SAHILGIEVCKEHL--------NKNISIAIEKLVQ 414
              +         P+             I G+    E          +   +  ++ LVQ
Sbjct: 651 SYLNQKTGEDVKAPLVKEVAKYIFHMLKIFGVVEDDEDNMAYVKSKGSSAAAEEVDGLVQ 710


>gi|227495626|ref|ZP_03925942.1| cysteine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226830858|gb|EEH63241.1| cysteine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 445

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 142/459 (30%), Positives = 216/459 (47%), Gaps = 68/459 (14%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
            R  + FD L R L+       VTYVRNITDIDDKI+ ++ +      + +      +K 
Sbjct: 1   MRSAVAFDTLIRWLKR--NGMKVTYVRNITDIDDKILRKSAE------VGEPWWAWAAKF 52

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNY 162
            ++F      L  L  T +PRAT HI   + LI  +I  GHAY +    + FD  S+ +Y
Sbjct: 53  EREFSAAYDALGLLPATFEPRATAHITDQLNLINRLIERGHAYADGQGNVYFDVHSLDDY 112

Query: 163 GSFSRRKIDEQKMGTRV-----PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPG 214
           GS +R+ +   +            +  K++  DF LWK + P EP    W+SPWGRGRPG
Sbjct: 113 GSLTRQDLANMRTTEDESQIDSATEAGKRDTRDFALWKSAKPTEPTTAAWDSPWGRGRPG 172

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WH+ECSAMS  YLG+ FDIHGGG+DL FPHHENE AQS  A      AN+W+HN ++ L+
Sbjct: 173 WHLECSAMSERYLGETFDIHGGGIDLRFPHHENEQAQSHGAGWG--FANLWVHNAWVTLK 230

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G KMSKS GN + + ++LET        PAPV+R A+   H+R  +++  + L  A+   
Sbjct: 231 GEKMSKSLGNSLVVADILETV-------PAPVLRFALGTVHHRSTVEYGEETLAAAQAAW 283

Query: 335 SKWP-------------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
            +                     +   ++  +  A  +A+ +DLN   A+ ++++  +  
Sbjct: 284 DRLAGFVVRATQLLAENQVAEISEGELAQHPLPEAFAAAMNDDLNVAGALASVYERLKAG 343

Query: 376 TKNHDLLPI---------FNASAHILGIEVCKEHL--------------NKNISIAIEKL 412
                               A   ILG++                       +   +  +
Sbjct: 344 NSALTAGDTETVRVALCDVRAMLSILGLDPASTQWAPFVFGNGSSNNGAQHALDTLVSAV 403

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           ++ER      K +  AD +R +L   G ++ED  +    
Sbjct: 404 IEERAQARADKDWGRADALRDRLTVAGIVVEDSADGARW 442


>gi|85709165|ref|ZP_01040231.1| cysteinyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85690699|gb|EAQ30702.1| cysteinyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 486

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 141/495 (28%), Positives = 219/495 (44%), Gaps = 55/495 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  ++++N+L R+I EF  I     R+Y CGPTVY++ HIGN R  +  D L R L+   
Sbjct: 7   QTPLRLFNSLNRQIEEFVPIHEGEARVYTCGPTVYNYQHIGNMRAYVFADTLGRTLQLKG 66

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACL 117
            +  +T+V NITD+     +    E     +      +   I     + F +D  RL   
Sbjct: 67  LK--LTHVINITDVGHLTSDADEGEDKMEKMAASQGKSAWDIARFYQEDFERDLARLNVQ 124

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
                PRAT ++ +MI   + +    H YE  + + FD S++ +YG  +R   +E +   
Sbjct: 125 K-KQHPRATQYVEEMIAWGKRVADK-HCYELESGLYFDVSTVADYGKLARAVTEEGE--G 180

Query: 178 RVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+     K+N ADF +W+++   E     W+SPWG+G PGWH+ECS M    LG  FDIH
Sbjct: 181 RIERLEGKRNAADFAIWRKTPEGETRQMEWDSPWGKGAPGWHLECSVMGEALLGFPFDIH 240

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKT-------ANIWIHNGFLNLEGRKMSKSNGNFIT 287
            GG+D    HH NEIAQ+                A IW+HN FL     KMSKS+G F+ 
Sbjct: 241 TGGIDHREIHHPNEIAQNQAYCCSGGLSDATNSGARIWMHNNFLVERSGKMSKSSGEFLR 300

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           +  L++      + +     R+  L  HYR  ++F+ + L  A   L +           
Sbjct: 301 LQLLVD------KGFHPHAYRMMCLQAHYRSELEFSWEGLEAALTRLKRMIMAVERLADA 354

Query: 348 D--------------PAVLSALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHIL 392
                               A+ +DLNT  A+ AL   LA +         +      +L
Sbjct: 355 PSQPVAEHPKFAAPLAKFEEAMSDDLNTAIALTALEDALATKKVDAGIKRAVVEHMDAVL 414

Query: 393 GIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
           G+++          +    +     IE  +  R      K F+++D IR +L +KG  + 
Sbjct: 415 GLDLFSLSRADLRIRPASAEIAEEEIEDALARRKAARAEKDFATSDAIRDELAAKGVEVM 474

Query: 444 DYKNPDNGQRMTRWK 458
           D  +P        WK
Sbjct: 475 DG-DPLGWD----WK 484


>gi|85057859|ref|YP_456775.1| cysteinyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|109894883|sp|Q2NIP7|SYC_AYWBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|84789964|gb|ABC65696.1| cysteinyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 438

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/455 (33%), Positives = 216/455 (47%), Gaps = 36/455 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IYN+L RK   F+   P  I +YVCGPTVY+  H+GN RP+I FD + R L     + 
Sbjct: 2   LQIYNSLTRKKEFFKPDHPPQINIYVCGPTVYNHLHLGNTRPLIFFDTVKRYLEML--KF 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDKIIE + +             + +K  + F      L       +P+
Sbjct: 60  KVYYVVNITDIDDKIIETSLKNQVLE------KDLANKYIKSFNNLLETLNIQTINFKPQ 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI  IQ ++  G AY  +  I F  S I +YG   ++ + + K   R      
Sbjct: 114 ATQYINSMILYIQTLLDQGFAYFTDQGIYFRVSKITDYGKLKKQDLSQLKQNVRKQLDPQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DFILWK+++     + SPW  GRPGWH EC+ M         DIHGGG DL FPH
Sbjct: 174 KEFPGDFILWKKTSQG-ITYPSPWFAGRPGWHTECATMIEQLFKLPLDIHGGGTDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  AN ++H   L+ + +KMSKS GN I   +LL       + +  
Sbjct: 233 HENEIAQTHAHSHQK-LANFFMHVERLDYQNQKMSKSLGNIIWCKDLL-------KQYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
            +I+  +L THYR+PI+F+   + + +    K     T                   I  
Sbjct: 285 CIIKFLILSTHYRKPINFSYDLMEQTQQKYKKITYFLTKNNFYLKVNHFFCQTLDQDIMQ 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARES--TKNHDLLPIF-NASAHILGIEVCKEHLNKNIS 406
                + +D  T   I  + ++ + +  T+  D L  F N+   IL   V     NK   
Sbjct: 345 LFHQLMQDDFATHKVIDLMEQIIKRAHQTQILDKLSQFQNSLLLILNTLVIAIPFNKPTK 404

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             ++          K + F  AD +RKQL  KGFI
Sbjct: 405 KDLQTYF-LWQDARKCRDFIQADILRKQLLDKGFI 438


>gi|146162816|ref|XP_001010154.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|146146260|gb|EAR89909.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 716

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 151/567 (26%), Positives = 229/567 (40%), Gaps = 129/567 (22%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +K+ NTL  + + EF       +R Y CGPTVYD +HIG+AR  I  D++ R++  Y+
Sbjct: 69  TGLKVKNTLNPQNLVEFVPHKGKQVRFYNCGPTVYDSSHIGHARTYISADIIKRIMVKYF 128

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G     +  NITDIDDKII+++ +        +  +    K    + +D   L    P  
Sbjct: 129 GYDVF-HCMNITDIDDKIIKKSNES------GEEFTAFARKWEMDYWQDMETLNVDKPDV 181

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSF------SRRKI 170
             R + ++P++I  I+ II +G+AY AN  + F+           Y           +K+
Sbjct: 182 IVRVSEYVPEIISYIEKIIENGYAYVANGSVYFNVDKFHESPTHCYSKLEPQSVNDAQKL 241

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           DE +      ++  K++P DF LWK S P EP W+SPWG+GRPGWHIECS M+S  LG  
Sbjct: 242 DEGEGALGKKDEKEKRSPRDFALWKASKPGEPFWDSPWGQGRPGWHIECSTMASEILGYP 301

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFI 286
            DIH GG DL FPHH+NE+AQS      +    +  N ++H G L+++G KMSKS  NFI
Sbjct: 302 VDIHMGGEDLKFPHHDNELAQSEAFYNKQDCQNQWVNYFMHTGHLHIDGLKMSKSLKNFI 361

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------ 340
           TI  L              V+RL  +   Y   +D+T   + EA+    K+ +       
Sbjct: 362 TIKHL-------SSQHSQRVLRLLFMKQTYDSTMDYTTDSIHEAKTKDKKYSEFYLTMNA 414

Query: 341 -------------STSKGIIDPAVLSALYN-------DLNTVSAIQALHKLARESTKNHD 380
                           +  +    +    N       + N   A++ L ++         
Sbjct: 415 ILLQSEINVPQKWGPREFELRDLFVEKQDNIHRAFQKNFNVPEALKELDEIITAVNTYIK 474

Query: 381 --------LLPIFNASAHI---LGIEVCKEHLNKNISIAIEK--LV-QERLILL-KMKK- 424
                   +  IFN   HI   LG+   K+         I    L+   R  +    K  
Sbjct: 475 EKPIIHLLIRSIFNYVKHIFNCLGLIYEKQQAQAKDDTFIRTVGLISSLRDEIRGANKDL 534

Query: 425 ----------------------------------------------------FSSADYIR 432
                                                               + ++D IR
Sbjct: 535 QVINKAAINAKSSLGEITLKLEPNASESAVQIATDYITQVLKCVEDNQLQQIYKASDEIR 594

Query: 433 KQ-LESKGFILEDYKNPDNGQRMTRWK 458
            + L   G  ++D K  +       WK
Sbjct: 595 DEKLIQIGIRIDDGKPGEPS----LWK 617


>gi|256372010|ref|YP_003109834.1| Cysteine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008594|gb|ACU54161.1| Cysteine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 372

 Score =  405 bits (1040), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/396 (38%), Positives = 217/396 (54%), Gaps = 28/396 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++IY+T  +++ + +      I++Y CG T YD AH+G+A   + FDVL R L  +   +
Sbjct: 1   MRIYDTQAQRVVDLELRPGEEIKIYTCGITPYDAAHLGHAAVYVTFDVLARHLERH--RQ 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
               VRN+TD+DD I+ +AR+      +      + +    QF +D T L    P  +PR
Sbjct: 59  RARCVRNVTDVDDDILRKARE------LGTNYLDLAAMEIAQFDQDMTALGVRRPAVEPR 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
           AT+ I +++ L+Q+++  GHAYE +  + F  +S P +GS S    D      R     P
Sbjct: 113 ATSAIAEILSLVQDLVDSGHAYEVDGWVYFSVASEPTFGSISHLDRDTMIALARERGGDP 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K +P DF+LW+ S   EP WES +G GRPGWHIECSA++   LG V DIHGGG DL
Sbjct: 173 DDPRKHDPLDFVLWQPSLADEPAWESRFGPGRPGWHIECSALAMRELGPVVDIHGGGSDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IFPHHE E AQS      E     W+H G + L+G KMSKS GN + + ELL       +
Sbjct: 233 IFPHHECEAAQSRAITG-EPFVRHWVHVGMVRLDGVKMSKSLGNLVFVRELL-------K 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             PA V+RLA+L  HYR   D+T   L EA      W    T  G +D  V +AL NDL+
Sbjct: 285 EVPAAVVRLALLSQHYRTSWDWTGGLLEEARERYGLWRAAGTGDGAVD-EVDAALDNDLD 343

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           T  A++A+ + AR            + +A +LG+E+
Sbjct: 344 TPGALEAIDRAARAGRG-------VSEAARMLGVEL 372


>gi|39938627|ref|NP_950393.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|61216243|sp|Q6YR75|SYC_ONYPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|39721736|dbj|BAD04226.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 438

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 158/455 (34%), Positives = 218/455 (47%), Gaps = 36/455 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L RK   F    P  I MYVCGPTVY+  H+GN RP+I FD + R L       
Sbjct: 2   LKIYNSLTRKKEFFNPAHPPQINMYVCGPTVYNHLHLGNTRPLIFFDTVKRYLEMLNF-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDKIIE A +             + +K  + F      L       +P+
Sbjct: 60  RVYYVVNITDIDDKIIENALKNQVLE------QDLANKYIKSFNNLLKTLNIQTINFKPQ 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT +I  MI  IQ ++  G AY  +  I F  S I +YG   ++ + + K   R      
Sbjct: 114 ATQYINSMIVYIQTLLDQGFAYFTDQGIYFRVSKIDDYGKLKKQDLSQLKQNARKQLDPQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+ P DFILWK+++     + SPW  GRPGWH EC+ M         DIHGGG DL FPH
Sbjct: 174 KEFPGDFILWKKTSQG-ITYPSPWFAGRPGWHTECATMIEQLFKLPLDIHGGGTDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENEIAQ+      +  AN ++H   L+ + +KMSKS GN I   +LL       + +  
Sbjct: 233 HENEIAQTHAHSHQK-LANFFMHVERLDYQNQKMSKSLGNIIWCKDLL-------KQYNP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
            +I+L +L THYR+PI+F+   + +A+    K     T                   I  
Sbjct: 285 CIIKLLILSTHYRKPINFSYDLMEQAQQKYQKITDFLTKNNFYLKVNQFSCQALDQDIMQ 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARES--TKNHDLLPIF-NASAHILGIEVCKEHLNKNIS 406
                + +DL T   I  + +  +++  T+  D L  F N+   IL I       NK   
Sbjct: 345 LFHQLMQDDLATHKVIDLMEQTIKQAHQTQILDKLSQFQNSLLLILNILGITIPFNKPTK 404

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             ++          K + F+ AD +RKQL  KGFI
Sbjct: 405 TDLQTYF-LWQDARKYRDFAQADILRKQLLDKGFI 438


>gi|224042836|ref|XP_002190645.1| PREDICTED: cysteinyl-tRNA synthetase 2, mitochondrial (putative)
           [Taeniopygia guttata]
          Length = 652

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 145/544 (26%), Positives = 227/544 (41%), Gaps = 111/544 (20%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  I  +N+  +       +       Y CGPTVYD AH+G+A   + FD++ R++  ++
Sbjct: 118 RSGIVAFNSRSQSKEPLVLVTEGVATWYSCGPTVYDHAHLGHACSYVRFDIIRRIMTRFF 177

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V  V  ITDIDDKII+RA +      +N +   +     + F +D   L  L PT 
Sbjct: 178 GIE-VIMVMGITDIDDKIIKRANE------MNISPIALARIYEEDFKQDMAALKVLPPTV 230

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T++IPQ+I  I+ I+  G AY  +   + FD  S    YG  +    D Q      
Sbjct: 231 YMRVTDNIPQIISFIETIMSSGQAYATSQGNVYFDVKSWGRRYGVLTAINPDTQ----DE 286

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK + P E  W SPWG+GRPGWHIECS +SS   GK  DIH GG+D
Sbjct: 287 AVDSDKRHGKDFALWKAAKPQELSWNSPWGKGRPGWHIECSTISSAVFGKQLDIHTGGID 346

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     + E+  N ++H+G L+++G   KMSKS  N+ITI + L     
Sbjct: 347 LAFPHHENEIAQCEVYHQCEQWGNYFLHSGHLHVKGSQEKMSKSLKNYITIKDFL----- 401

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
             +   +   R+  L   Y   I+++ + + +A+  L                       
Sbjct: 402 --KKCSSDQFRMFCLRGRYSSAIEYSEESMEDAKNRLQAISSFIRDANAYIKGQLVCDPV 459

Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
                          V +A  +D +T  A+ A+  L     +                  
Sbjct: 460 REDILWERLANTKATVKAAFADDFDTSRAVAAIMDLIHHGNRQLKAVTKDAVSPRSSVVY 519

Query: 380 -DLLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILL------------ 420
             ++       + LG+   +  +      +  +S  IE+LV+ R  +             
Sbjct: 520 GSIISYIEGFFNALGMSFGERQVALGGDKSAVLSSVIEELVRFRSKVRHYALALPRAADA 579

Query: 421 ------------------KMKK--------FSSADYIRKQLESKGFILEDYKNPDNGQRM 454
                             K K+          + D +R  L + G  ++D         +
Sbjct: 580 APLEGAAGAEEPKQEQKEKRKQLMQERKPLLEACDSLRGDLAAFGIHIQDRAA------V 633

Query: 455 TRWK 458
           + W+
Sbjct: 634 STWE 637


>gi|241761347|ref|ZP_04759435.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374254|gb|EER63751.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 516

 Score =  404 bits (1039), Expect = e-110,   Method: Composition-based stats.
 Identities = 154/516 (29%), Positives = 227/516 (43%), Gaps = 76/516 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            +N+L +KI  F  IDP  +R+Y CGPTVY+FAH+GN R  +  D L R+L +      V
Sbjct: 10  FFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWKGY--PV 67

Query: 67  TYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +V NITD+     D      + E  +      I  +    T+ F  D   L    PT  
Sbjct: 68  NHVINITDVGHLTSDSDTGDDKMEAAAHKAQKTIWDVARFYTEAFWSDLKNLNIFNPTIW 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
             AT+HI  MI   + I   G  Y+ ++ + FDTS +  YG  +  +  E +   R+   
Sbjct: 128 SIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGVGRIETV 185

Query: 183 YHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
             KK+PADF LW+RS+P E     W SPWG G PGWH+ECS MS  YLG+ FDIH GG+D
Sbjct: 186 AGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDIHTGGID 245

Query: 240 LIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
               HH NEIAQ+      ++   AN W+HN FL     KMSKS G+F+T++ L+E    
Sbjct: 246 HREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTLIEA--- 302

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------- 337
                     R+  L  HYR  ++F+   +  A   L +                     
Sbjct: 303 ---GIHPLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKKVVADGE 359

Query: 338 -------------------PQTSTSKGIIDPAVLS-------ALYNDLNTVSAIQALHK- 370
                               Q    +  +    L+       A+ NDL    A+  L + 
Sbjct: 360 PDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILELFDLAVSNDLMLPQALPLLEET 419

Query: 371 LARESTKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLK 421
           L  +  +  + L +  +   ILG+ +          +          +  L++ER +  K
Sbjct: 420 LGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLDLLEERQLKRK 479

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
            K F+++D IR +L   G  + D  +P   +    W
Sbjct: 480 EKDFAASDAIRDRLSEAGIDVLDG-DPLGWEWRPEW 514


>gi|73989537|ref|XP_534184.2| PREDICTED: similar to CG8257-PA [Canis familiaris]
          Length = 628

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/497 (30%), Positives = 232/497 (46%), Gaps = 93/497 (18%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +Y CGPTVYD AH+G+A   + FD++ R+L   +G   V  V  ITD+DDKII RA +  
Sbjct: 140 LYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGYN-VIMVMGITDVDDKIIHRASE-- 196

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
               +N + + + +   ++F +D   L  L PT   R T  IPQ+I  I+ II +GHAY 
Sbjct: 197 ----MNVSPASLANLYEEEFKQDMAALKVLPPTVYVRVTETIPQIISFIEGIIANGHAYS 252

Query: 147 EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
            A   + FD  S  + YG                P    K++ +DF LWK + P E  W 
Sbjct: 253 TAQGNVYFDLQSRGDKYGKLVGVVPGPLG----EPVDSDKRHASDFALWKAAKPQEVFWA 308

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG+GRPGWHIECS +SS   G   DIH GG+DL FPHHENEIAQ     + ++  N +
Sbjct: 309 SPWGKGRPGWHIECSTISSLVFGSQLDIHSGGVDLAFPHHENEIAQCEAFHQCKQWGNYF 368

Query: 266 IHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +H+G L+++G   KMSKS  N+ITI + L       +++   V RL  + + YR  ID++
Sbjct: 369 LHSGHLHVKGKEEKMSKSLKNYITIKDFL-------KTFSPDVFRLFCMRSSYRAAIDYS 421

Query: 324 VQRLTEAEILL---SKWPQTSTS--KGII-----------------DPAVLSALYNDLNT 361
              + EA+ LL   + + + + +  KG +                   AV +AL +D NT
Sbjct: 422 DGTMLEAKHLLLVVAAFVEDARAYMKGQLVCGPIRDDVLWERLCHTQEAVKAALADDFNT 481

Query: 362 VSAIQALHKLARESTKNH-----------------DLLPIFNASAHILGIEVCKEHLNKN 404
            +A+ A+  L     +                    ++         +GI +    L   
Sbjct: 482 PAAVDAIMDLIHHGNRQLKARTKEPGGPRSPAVFGSIVSYIKQFFETVGISLADRQLVSE 541

Query: 405 IS------IAIEKLVQERLILLKMKKFSSA-----------------------DYIRKQL 435
            S        +E+LV+ RL + +   F+ A                       D +R+ L
Sbjct: 542 DSSRATLHSVVEELVRFRLKVRQ---FALATEAATREAGRQQLLDRRPLLEACDTLRQDL 598

Query: 436 ESKGFILEDYKNPDNGQ 452
            + G  ++D  +    +
Sbjct: 599 AAHGISIKDRSSTSTWE 615


>gi|307181000|gb|EFN68774.1| Cysteinyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 518

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 155/503 (30%), Positives = 224/503 (44%), Gaps = 74/503 (14%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN + +          + ++ Y+CGPTVYD AHIG+A   I  D++ R+L  Y+    +
Sbjct: 39  VYNPITKCKVPLILKTENVLKWYMCGPTVYDSAHIGHAATYIKSDIIRRILSNYF-NIDI 97

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V  ITDIDDKII+ +      I        ++     +F  D  +L    P    R T
Sbjct: 98  LLVMGITDIDDKIIKCS------IESGKDFKTLSKHFETEFYADMNKLNIGEPYLYCRVT 151

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           ++IPQ+I+ ++ ++   + Y   +  + FDT+    YG       D  K          K
Sbjct: 152 DYIPQIIHFVEELLTRNYGYITKDGSVYFDTNKYNKYGKLKTSVHDVVKSQH-----PDK 206

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           K+  DF LWK +   EP W  PWG GRPGWHIECSA++S   G   DIH GG+DL FPHH
Sbjct: 207 KSALDFALWKAAKNNEPSWRCPWGYGRPGWHIECSAIASAVFGNSVDIHSGGIDLAFPHH 266

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKFGGRSWPA 304
           ENE AQSCC   + +  N W+H G LNL+G  KMSKS  N I+I   LE        + A
Sbjct: 267 ENEEAQSCCYHNVNQWVNYWLHCGHLNLKGDVKMSKSLKNTISIQNYLE-------EYSA 319

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDP----- 349
             +R+  L++HYR  I+F+ + +  A ++  K+                 G ID      
Sbjct: 320 NHLRMLCLLSHYRNDIEFSDEVMQNAVLVTQKFDNFINDCDNYVVGKFETGDIDENLLFT 379

Query: 350 -------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------FNASAHI----- 391
                   V SAL +D NT  AI A+  L     K      I       +A A +     
Sbjct: 380 TLYDTRNKVYSALADDFNTSKAIHAIINLIGIGNKMLYQSNITPHSKGISAVAAVSNYVS 439

Query: 392 -----LGIE------VCKEHLNKNISIAIEKLVQERLILLKM--KK---FSSADYIRKQL 435
                LGI          + +   I   +   +  R   L+   K        D +R  L
Sbjct: 440 STLSKLGISRSTMSTAENQQIKDIIDCFLNFRMTIRNRALEQNPKDTILLKECDNVRMNL 499

Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
            + G +++D ++  N      WK
Sbjct: 500 STYGIVVKDQQSVTNW----SWK 518


>gi|270001919|gb|EEZ98366.1| hypothetical protein TcasGA2_TC000823 [Tribolium castaneum]
          Length = 511

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 158/503 (31%), Positives = 229/503 (45%), Gaps = 80/503 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              IK++N   R        + + +  Y CGPTVYD +HIG+A   +  D++ RLLR+Y+
Sbjct: 23  DTGIKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKLDIIQRLLRHYF 82

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT V NITDIDDKII RA               +  K   +F KD   L    P  
Sbjct: 83  NLNVVT-VMNITDIDDKIIARANTAKVP------PKELAKKFEAEFWKDLDALDVRRPDC 135

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             R T ++  +   I+ +I  G AY+A +N + FD  +  NY          Q +G   P
Sbjct: 136 VLRVTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYDNYAKL-------QNIGEDAP 188

Query: 181 EKYH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL----------GK 229
           E    KK+  DF LWK + P E  W S WG+GRPGWHIECSA++ H L          G 
Sbjct: 189 EPSKFKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHVLVPTIRNNTSLGP 248

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITI 288
             DIH GG+DL FPHHENE AQSC      +  N W+H G L+L + +KMSKS  N I+I
Sbjct: 249 EIDIHAGGIDLRFPHHENEEAQSCARYCRPQWVNYWLHTGHLHLKDSQKMSKSLHNTISI 308

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----- 343
           + +LE          AP  R+A LM+HYR  ++++ + +  A  +L  +     +     
Sbjct: 309 SSMLEDT-------TAPAFRMACLMSHYRSRMEYSNEFVITASKVLQNYINFVDNCQNYL 361

Query: 344 ----KGIIDPA------------VLSALYNDLNTVSAIQALHKLARESTKNH-----DLL 382
               K  +D              + SAL +D NT   I  +++L             DL 
Sbjct: 362 NGYLKADVDNDTVSKLVVESANKIHSALIDDFNTSEVISTINELISAVNSILHSSRTDLC 421

Query: 383 P-----------IFNASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLK----MKK- 424
                       + +++ ++ GI V K+  +   N    +  L   R  + +     K  
Sbjct: 422 DTKSVAVIAASNLVSSTLNMFGINVNKKQSSVCDNYVEVMNILNDFRQSIRQLGISNKDK 481

Query: 425 --FSSADYIRKQLESKGFILEDY 445
                 D +R  L+S G  ++D+
Sbjct: 482 NVLELCDKVRDNLKSIGITIKDH 504


>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
          Length = 400

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 140/399 (35%), Positives = 204/399 (51%), Gaps = 65/399 (16%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              L CL P+ +PR ++H+ ++I +I+ I+ +  AY    ++ F   + P YG  S RK+
Sbjct: 1   MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 60

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           D+ + G RV     K+NPADF LWK +   EP W+SPWG GRPGWHIECSAMS+HYLG  
Sbjct: 61  DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 120

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG DLIFPHHENEIAQS  A   + T N WIHNGF+N+  +KMSKS GNF+TI +
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAA-CCDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRK 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
           ++E        +    +R+ +L THYR PI++T+++L  A   L    QT      I   
Sbjct: 180 VIEM-------YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEEICQH 232

Query: 350 ----------------------AVLSALYNDLNTVSAIQALHKLAREST---------KN 378
                                    +++ +DL+T  A+ A+ +  +            K 
Sbjct: 233 QQSNTGNPLPANTLNYIQKLHDEFETSMSDDLHTSVALAAMSEPLKVMNDLLHTRKGKKQ 292

Query: 379 HDLLPIFNAS-------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLIL 419
              L   +A          +LG+      E  ++  +K +         + + ++ER   
Sbjct: 293 DKRLESLSALEEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAA 352

Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            K K++  +D IRK+L + G  L D      G   T W+
Sbjct: 353 RKAKQYEKSDEIRKELAAVGIALMD------GPDGTTWR 385


>gi|307295116|ref|ZP_07574958.1| cysteinyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306879590|gb|EFN10808.1| cysteinyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 505

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 144/505 (28%), Positives = 226/505 (44%), Gaps = 64/505 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L R +  F  I P++ R+Y CGPTVY++AH+GN R  +  D L R L +  
Sbjct: 13  DAPLRLFNSLTRTVDPFAPIQPNHARVYSCGPTVYNYAHLGNLRAYVFTDTLRRTLLWKG 72

Query: 62  GEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            +  VT++ NITD+     +      + E  +     +I  I +  T  F ++   L  +
Sbjct: 73  LD--VTHIINITDVGHLTSDADAGDDKMEAAARAQAKSIWDIAAHYTDAFKRNIADLNII 130

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           AP+    AT+++PQMI   + I    H YE    + FD+SS+P+YG+ +  + D      
Sbjct: 131 APSEWTVATDYVPQMIAFAEKI-APAHCYELETGLYFDSSSVPDYGALAGGRDDA--AHA 187

Query: 178 RVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
           R+     K+NP+DF +W++S P E     W+SPWG+G PGWH+ECS MS   LG  FDIH
Sbjct: 188 RIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSEARLGHPFDIH 247

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKT------ANIWIHNGFLNLEGRKMSKSNGNFITI 288
            GG+D    HH NEIAQ+               A  W+HN FL     KMSKS G F T+
Sbjct: 248 TGGIDHREIHHPNEIAQNQAYCACNDAQPGFTGAQWWMHNNFLVDRQGKMSKSKGGFTTL 307

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------- 337
             L++              RL  L  HYR  ++F+ + ++ A   L +            
Sbjct: 308 FSLIDA------GVHPLAYRLLCLGAHYRSELEFSAESVSAALTRLKRLVMGVENLKARA 361

Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARESTKNHDLL 382
                                  +     +A+ +DL T  A+  L + +A +     + L
Sbjct: 362 EGITWQSLRLDWLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEETIAMKKVPVDEKL 421

Query: 383 PIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
            +  A    LG+ +          +    +     IE  +  R      K F+ +D IR 
Sbjct: 422 CLLAAFDQALGLNLLTIGRADLRIQPRDAQIAPDEIEAELDRRQTARAEKDFALSDEIRD 481

Query: 434 QLESKGFILEDYKNPDNGQRMTRWK 458
            L ++G  + D  +P        W+
Sbjct: 482 ALIARGVEVMDG-DPLRWD----WR 501


>gi|94495840|ref|ZP_01302419.1| cysteinyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424532|gb|EAT09554.1| cysteinyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 518

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 149/511 (29%), Positives = 233/511 (45%), Gaps = 71/511 (13%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++++N+L R +  F  I+  + R+Y CGPTVY++AHIGN R  +  D L R L +    
Sbjct: 22  PLRLFNSLTRAVAPFAPIEDGHARVYSCGPTVYNYAHIGNLRAYVFTDTLRRTLLWKGL- 80

Query: 64  KCVTYVRNITDIDDKIIERA----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
             VT++ NITD+     +      + E  +     +I  I +  TQ F ++   L  +AP
Sbjct: 81  -SVTHIINITDVGHLTSDADAGDDKMEAAARASAKSIWDIAAHYTQAFKQNIADLNIIAP 139

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           +    AT+++PQMI   + I    H YE ++ + FD+ S+P+YG+ +  + D      R+
Sbjct: 140 SEWTVATDYVPQMIEFAEKI-APDHCYELDSGLYFDSRSVPDYGALAGGRDDA--AHARI 196

Query: 180 PEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+NP+DF +W++S P E     W+SPWG+G PGWH+ECS MS   LG+ FDIH G
Sbjct: 197 DPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSQARLGQPFDIHTG 256

Query: 237 GLDLIFPHHENEIAQSCCAD-----------RIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           G+D    HH NEIAQ+                    A  W+HN FL     KMSKS G F
Sbjct: 257 GIDHREIHHPNEIAQNQAFHACCDPDVGAVDAGFTGARWWMHNNFLVDRQGKMSKSKGGF 316

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
            T+  L++              RL  L  HYR  ++F+   L  A   L +         
Sbjct: 317 TTLFSLIDA------GVHPLAYRLLCLGAHYRSELEFSADNLAAALTRLKRLVMGVEGLK 370

Query: 338 ----------PQTSTSKGIIDP-------AVLSALYNDLNTVSAIQALHK-LARESTKNH 379
                     P+    +  + P          +A+ +DL T  A+  L + +A +     
Sbjct: 371 ARAEGVTWQSPRLDYLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEEAIAVKKVPAD 430

Query: 380 DLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
           + L +  A    LG  +          +    +  +  +E  ++ R      K F+ +D 
Sbjct: 431 EKLCLIAAFDQALGFNLLSLTRADLRMRPKDAQLTADQVETELERRAAARANKDFALSDT 490

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
           IR +L +KG  + D  +P       RW  +P
Sbjct: 491 IRDELIAKGVEVMDG-DPL------RWDWRP 514


>gi|85000123|ref|XP_954780.1| cysteinyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65302926|emb|CAI75304.1| cysteinyl-tRNA synthetase, putative [Theileria annulata]
          Length = 694

 Score =  403 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 157/526 (29%), Positives = 230/526 (43%), Gaps = 95/526 (18%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             + + N+L      EF   +   +R Y CGPTVYD AH+G+AR  I  D +  +L  Y 
Sbjct: 66  TGLYVKNSLNPSSKVEFVPEEGRKVRWYTCGPTVYDAAHMGHARTYIACDTIRSILENYL 125

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
                 +V NITD++DKII+RA  E          + +TS   ++F  D   L    P  
Sbjct: 126 NYDLF-FVENITDVEDKIIQRALNE------GKPFTEVTSHWEKEFWNDMLSLGVSLPDC 178

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--------- 172
             R ++++ +++  I+ I+ +G+AY ++  + FD  S  N G     K++          
Sbjct: 179 ITRVSDYMTEIVDFIKKILDNGYAYVSDGSVYFDIESFRNSGKHVYAKLEPTSFNDLNRI 238

Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KV 230
               GT      +KK+ +DF LWK+S   EP WESPWGRGRPGWHIECSAMS+   G +V
Sbjct: 239 LDAEGTLGEVSLNKKSKSDFALWKKSKVNEPSWESPWGRGRPGWHIECSAMSTCIFGKEV 298

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIH GG+DL FPHH+NEIAQS       + AN ++H G L++ G KMSKS  NFIT+ E
Sbjct: 299 FDIHSGGIDLRFPHHDNEIAQSEAYFDTNRWANYFLHFGHLHIHGLKMSKSLKNFITVKE 358

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT--VQRLTE------------------- 329
           +L         +    IRL  L + Y   ++F      + E                   
Sbjct: 359 MLS-------KYNKRQIRLLFLNSRYDSTLNFNSGPDGMDEPIAIDETFFNFFSTLNSKL 411

Query: 330 AEILLS-KWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------- 376
           + + L  KW +     +     +   V +A  ++ +T   +  L K              
Sbjct: 412 SNLSLDQKWSEDDLNLNNEFEKLKSNVHAAFLDNFDTPKVLSNLCKFISTVNTFMFDPKN 471

Query: 377 --KNHDLLPIFNASAHILGIEVC-----------KEHLNKNISIAIEKLVQERLILLKMK 423
             K    L        ILG+              K   ++N    + +LV  R       
Sbjct: 472 QIKYTQALLFKQYLYRILGVLKLVEPGCEYGVENKSGSSENEKSLLNELVDLRQKTRA-- 529

Query: 424 KFSSA------------------DYIRKQ-LESKGFILEDYKNPDN 450
            F+ A                  D +R Q L + G ILED  +  +
Sbjct: 530 -FAQATLKNKVDSETTKELLKQCDRLRDQTLPNLGIILEDCDDGSS 574


>gi|145499052|ref|XP_001435512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124402645|emb|CAK68115.1| unnamed protein product [Paramecium tetraurelia]
          Length = 679

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 152/554 (27%), Positives = 242/554 (43%), Gaps = 115/554 (20%)

Query: 3   KKIKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +K+ N+L+   +  F  I+   +  Y CGPTVY  +H+G+AR  +  DV+ R LR Y+
Sbjct: 35  TGLKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLRDYF 94

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               ++ V NITDIDDKII  A+               T    + F      L    P  
Sbjct: 95  NYDLLS-VMNITDIDDKIINGAKL------AKQDFLEFTRVWEKDFFSAMEALNIELPDV 147

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR--------KIDEQ 173
             R ++++P+++  I+ II +G+AY++N  + FD       G    +         + E 
Sbjct: 148 ITRVSDYVPEIVTFIEKIIANGYAYDSNGSVYFDVQKYLADGHTYPKMRPEMNVDLLQEG 207

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           +  ++V ++  K++P DF LWK S P EP W SPWG GRPGWHIECS M+S  LG   D+
Sbjct: 208 EGESQVNKQQEKRSPNDFALWKASKPEEPKWPSPWGEGRPGWHIECSVMASAILGNPIDL 267

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DLIFPHH+N +AQ+      ++  N +IH G LN+  RKMSKS  NF+TI+E+L 
Sbjct: 268 HAGGIDLIFPHHDNSLAQAEACFNCDQWINYFIHLGHLNIADRKMSKSLKNFLTIDEVL- 326

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLS---- 335
                 + +    +RL   +  Y   ++++ +++ +A              +I L     
Sbjct: 327 ------KRYTPRQVRLNFAIHQYDAVMNYSEEQVEQAISKDKAYQEFFQNTKIYLRESQV 380

Query: 336 ----KWP----QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------- 378
               KW     Q S S       V +AL  + +  + I+A+ KL  +             
Sbjct: 381 TGPQKWTQNDFQISNSLRNTKQIVHAALLKNFDFPTVIEAIDKLINQVNAQIAGKTVRAP 440

Query: 379 --HDLLPIFNASAHILGIEVC--------------------------------------- 397
               ++   +    +LG+                                          
Sbjct: 441 LVQSVVQYVHFILGLLGLNYLTLNNNSIDIKSIMAEVCSIRDQVKLAARKGEFEAISNIV 500

Query: 398 -------KEHLNKNISIAIEKLVQERLILLKMKK----FSSADYIRKQ-LESKGFILEDY 445
                  +++L+  I   I +  Q+ L   + K     F   D +R + L   G  +ED 
Sbjct: 501 TQKHFQYEKNLSNLIVDNINQFQQQVLAASQEKNKQQLFQLCDKLRDEQLFELGIQIED- 559

Query: 446 KNPDNGQRMTRWKQ 459
           K+ D   + + WKQ
Sbjct: 560 KDKD---QPSIWKQ 570


>gi|221055309|ref|XP_002258793.1| cysteine--trna ligase [Plasmodium knowlesi strain H]
 gi|193808863|emb|CAQ39566.1| cysteine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 695

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 153/500 (30%), Positives = 228/500 (45%), Gaps = 79/500 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N+L R   EF   +   IR Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ 
Sbjct: 122 TGLLVNNSLTRSKVEFVPQEKDQIRWYACGPTVYDAAHLGHARTYVSFDIIRRILVNYF- 180

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V NITDIDDKII+R+ +E        + + +  K   +F +D  +L  L PT  
Sbjct: 181 KYDVFMVINITDIDDKIIKRSEEEKV------SFTELARKWELEFWEDMKKLNVLLPTAI 234

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDE--------- 172
            R + ++ Q+I+ I+ II + +AY +    + FD  +          +++          
Sbjct: 235 TRVSEYVDQIIHYIEKIIENKYAYVSEEGSVYFDIDAFKKNPKHFYARMEPLSVKDETKI 294

Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G        KKN  DF LWK S P EP W SPWG+GRPGWHIECS M+S+ LG V 
Sbjct: 295 LEGEGDLGVISKKKKNSYDFALWKSSKPNEPYWNSPWGKGRPGWHIECSTMASNILGSVL 354

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +
Sbjct: 355 DIHSGGVDLRFPHHDNELAQSEAFFDASQWVNYFLHSGHLHIEGLKMSKSLKNFITIKHM 414

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEAE----------ILLSK--- 336
           L         +    IR+  L+  +   ++++   + + +             LL     
Sbjct: 415 LS-------QYTPNQIRILFLLNKWDNFMNYSPNGESMIQCVEIDKFLFNFFALLEMKIK 467

Query: 337 ----------WPQTSTSKGII----DPAVLSALYNDLNTVSAIQALHKLARESTKN---- 378
                     W Q   +   +       V  AL ++ NT   I AL KL  E        
Sbjct: 468 NFHLSNSNLFWTQVDNNLNNLFRSTKNKVHQALLDNFNTPEVILALQKLITEINIYLQNE 527

Query: 379 -------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
                   +L    +      G+   +    KN     ++L+Q                I
Sbjct: 528 KVQIGLLLELKHYISFILDTFGLVYGQTQSGKN--EKFDELLQTLGTYRSN--------I 577

Query: 432 RKQL--ESKGF--ILEDYKN 447
           R  L   +K    I++D K+
Sbjct: 578 RTTLQSNAKLIRKIMKDTKD 597


>gi|300123539|emb|CBK24811.2| unnamed protein product [Blastocystis hominis]
          Length = 595

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 155/509 (30%), Positives = 226/509 (44%), Gaps = 93/509 (18%)

Query: 23  PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
           P  +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y+    V +V NITDIDDKII+R
Sbjct: 3   PRKVLWYSCGPTVYDVAHMGHARTYLSQDIIMRILRDYF-NYDVQFVMNITDIDDKIIKR 61

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           +             + +  K   +F++D   L C       R + ++ ++I +IQ II +
Sbjct: 62  S------TEAGIPFTELARKYENEFMEDMKTLGCRTANVITRVSEYVDEIIEMIQGIINN 115

Query: 143 GHAYEANNEIIFDTSSIPN---YGSFS--RRKID-----EQKMGTRVPEK----YHKKNP 188
           G+AYEAN  + FDT+S      YG  S     +      E        E+      K++P
Sbjct: 116 GYAYEANGSVYFDTTSFQKNHVYGKLSTAHAVLSLSLVPEMVGNVNTEEEQDFASEKRHP 175

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG----KVFDIHGGGLDLIFPH 244
            DF LWK S P EP W SPWG GRPGWHIECSAMS            D+H GG+DL  PH
Sbjct: 176 NDFALWKASKPGEPMWNSPWGAGRPGWHIECSAMSFSIFKTISDGRIDVHSGGVDLRLPH 235

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H NE+AQS       ++ N ++H G LN++G KMSKS  NFITI + L       + +  
Sbjct: 236 HTNEMAQSEAYMECSQSVNYFLHTGHLNIDGLKMSKSLKNFITIRQTL-------QQFTP 288

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLS--------KWPQTST 342
             IR+  L+  +   ++++   + EA              +  L         +W     
Sbjct: 289 SQIRIYFLLHKWNTTMNYSDGAMEEARAKEKLFAEFFHNVKATLRQLTADQPQRWDDAEV 348

Query: 343 S-KGIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------- 387
                +D A   V + L +D +T  A++AL  L R   +  +      A           
Sbjct: 349 QLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLETAKHIVAPLVLSCAGFVS 408

Query: 388 -SAHILGIEVCKEHL-----------NKNISIAIEKLVQERLILLKMK-KFS----SADY 430
               + G+   +  +              +S  +E L + R ++ K +   +      D 
Sbjct: 409 QMFRVFGLIEPEPKIGFAAGEEAADREAVLSPVVEILSKFRTVVKKNRADPAALLKLCDE 468

Query: 431 IRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
           IR   L   G  LED  N       T WK
Sbjct: 469 IRDDILPFVGIRLEDTAN------GTIWK 491


>gi|225468795|ref|XP_002262997.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 435

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 150/439 (34%), Positives = 213/439 (48%), Gaps = 79/439 (17%)

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
           II RA +      + +    ++S+  Q+++ D T L CL+PTHQPR ++H+ Q+  +I  
Sbjct: 1   IIRRANE------LGENPLTLSSRFCQEYLDDMTDLHCLSPTHQPRVSDHMDQIKDMITQ 54

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           II +  AY  + ++ F     PNYG  S RK++  + G RV     K+NPADF LWK + 
Sbjct: 55  IINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDSRKRNPADFALWKAAK 114

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           P EP W+SPWG GRPGWHIECSAMS+HYL   FDIHGGG+DLIFPHHENEIAQSC A   
Sbjct: 115 PGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQSCAA-CQ 173

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E   + W+HNG +     KMSKS GNF TI ++ +        +    +R  +L THYR 
Sbjct: 174 ESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL-------YHPLALRYFLLGTHYRS 226

Query: 319 PIDFT--------------VQRLTEAEILLSKWPQTSTSKGIIDPA-----------VLS 353
           P++++               Q L + E  LS + + +     I PA             +
Sbjct: 227 PVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCITPAAQDCIRTLQTDFQT 286

Query: 354 ALYNDLNTVSAI-QALHKLAREST--------------------KNHDLLPIFNASAHIL 392
            + +DL+T   +  +L +  R                          +L         +L
Sbjct: 287 KMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTELGKEVKGVLSVL 346

Query: 393 GI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           G+       EV ++   K +         +  L++ER +  K K FS  D IR  L SKG
Sbjct: 347 GLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGDQIRADLASKG 406

Query: 440 FILEDYKNPDNGQRMTRWK 458
             L D        + T W+
Sbjct: 407 IALMDV------GKETIWR 419


>gi|260787696|ref|XP_002588888.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
 gi|229274059|gb|EEN44899.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
          Length = 512

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 150/526 (28%), Positives = 225/526 (42%), Gaps = 98/526 (18%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L R+       + S    Y CGPTVYD AH+G+A   + FD++ R++  ++    +
Sbjct: 2   VYNSLCRRKVPLILPNKSFASWYQCGPTVYDHAHLGHACCYVKFDIIRRIMEDFF-NIDL 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V  ITDIDDKII +AR+      +N   + +      +F +D  RL    PT   R T
Sbjct: 61  VMVMGITDIDDKIISKARE------LNMEFTHVAQTFANEFKRDMVRLRVQPPTVYTRVT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYH 184
           N++PQ+I  +Q II  G+AY  +   + FD     + YG  S                  
Sbjct: 115 NYMPQIITFVQKIIDRGYAYPTDNGSVYFDVRKYGDRYGKLSVPSCFFL----SPAVDKE 170

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRG--RPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
           K+   DF LWK   P EP W SPWG+G  RPGWHIECS M+S   G   DIH GG+DL+F
Sbjct: 171 KRGFRDFALWKAGKPGEPWWTSPWGKGKGRPGWHIECSTMASAIFGDQLDIHTGGIDLMF 230

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLETKKFGGR 300
           PHHENEIAQ      + + AN ++H G L    +  KMSKS  N ITI E LE       
Sbjct: 231 PHHENEIAQCEAHHCVPQWANYFLHAGHLHKTSDKDKMSKSLKNTITIREFLE------- 283

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKWPQTSTS-------------- 343
            + A   R+  LMT YR  +++    + EA   +  L+ +   + +              
Sbjct: 284 KYTANQFRIFCLMTRYRSVVEYCDTMMNEAVSVQRTLTSFLNNADAYIRGQLQCEAIDEA 343

Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDL 381
                 G        A+ +D +T +A++A+  L R + K                    +
Sbjct: 344 LLMEKLGETKDKFRRAISDDFDTRAALEAILHLVRVTNKQLRTGGEVENPVRSPGVIAAI 403

Query: 382 LPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILL--------------- 420
               +    +LG+E     +         +   ++ LV+ R  +                
Sbjct: 404 QAYVDRVLQLLGVEYPGRRVGGATVQQAVMKDVLDSLVKFRNTVRHYALLKGPDAQPNPA 463

Query: 421 ----------KMKK----FSSADYIRKQLESKGFILEDYKNPDNGQ 452
                     + K+      + D IR +L   G  ++D     + Q
Sbjct: 464 GEGEVGQGKLQRKEREPLMKACDEIRTELVWAGIQIQDRGRKSSWQ 509


>gi|237844837|ref|XP_002371716.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211969380|gb|EEB04576.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 766

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 138/480 (28%), Positives = 214/480 (44%), Gaps = 82/480 (17%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++   Y 
Sbjct: 107 TGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YL 165

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITDIDDKII+R+               +     ++F  D T L    PT  
Sbjct: 166 NYDVTMCMNITDIDDKIIKRS------TEQGVDFLTLARHWEKEFFNDMTALNVRLPTVV 219

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQ---- 173
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +        YG      + ++    
Sbjct: 220 TRVSEYIPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVL 279

Query: 174 -KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
              G        K++P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L    D
Sbjct: 280 EGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLD 339

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI E L
Sbjct: 340 IHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECL 399

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEAEI------------------ 332
                    + A  IRL  LM  +   ++++   + + +A                    
Sbjct: 400 SR-------FTARQIRLLCLMNRWDSFMNYSPDGETMQQAVDVDRAFDNFFALVKAKLRD 452

Query: 333 ----------------LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
                            L++  + +  +      V  A+ ++ NT  A+ AL  L   + 
Sbjct: 453 ATPVSDYAQKWTSDDFALNETLRATKEQASASAGVHKAILDNFNTPEALVALQHLMSAAN 512

Query: 377 KNHD-------LLPIFNA-------SAHILGIEVCKEHL--------NKNISIAIEKLVQ 414
              +         P+             I G+    E          +   +  ++ LVQ
Sbjct: 513 SYLNQKTGEDVKAPLVKEVAKYIFHMLKIFGVVEDDEDNMAYVKSKGSSAAAEEVDGLVQ 572


>gi|71026881|ref|XP_763084.1| cysteinyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350037|gb|EAN30801.1| cysteinyl-tRNA synthetase, putative [Theileria parva]
          Length = 659

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 152/526 (28%), Positives = 231/526 (43%), Gaps = 95/526 (18%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             + + N+L      EF   +   ++ Y CGPTVYD AH+G+AR  I  D +  +L  Y 
Sbjct: 66  TGLYVKNSLSPSSKVEFVPEEGRKVKWYTCGPTVYDVAHMGHARTYIACDTIRSILENYL 125

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
                 +V NITD+DDKII+RA  E        + S ++S   ++F  D   L    P  
Sbjct: 126 NYDLF-FVENITDVDDKIIQRALNE------GKSYSEVSSHWEREFWNDMLSLGVSLPDC 178

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--------- 172
             R ++++ +++  I+ I+ +G+AY ++  + FD  +  + G     K++          
Sbjct: 179 ITRVSDYMVEIVDFIKKILDNGYAYVSDGSVYFDIEAFRSSGKHVYAKLEPTSFNDLNRI 238

Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KV 230
               GT      +KK+ +DF LWK+S   EP W+SPWG+GRPGWHIECSAMS+   G +V
Sbjct: 239 LDAEGTLGEVSVNKKSKSDFALWKKSKVNEPSWDSPWGKGRPGWHIECSAMSTCIFGKEV 298

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIH GG+DL FPHH+NEIAQS       K AN ++H G L++ G KMSKS  NFI+I E
Sbjct: 299 FDIHSGGVDLRFPHHDNEIAQSEAYFDSNKWANYFLHFGHLHIHGLKMSKSLKNFISIKE 358

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT--VQRLTE------------------- 329
           +L         +    IR+  L + Y   ++F      + E                   
Sbjct: 359 MLT-------KYNKRQIRILFLNSRYDSTLNFNSGPDGMDEPVSIDETFFNFFSTLNSKL 411

Query: 330 -AEILLSKWPQ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------- 376
            +  +  KW +     +     +   V +A  ++ +T   +  L K              
Sbjct: 412 SSLSVDQKWSEDDLNLNKEFEKLKSNVHAAFLDNFDTPKVLSNLCKFISTVNTFISDSKT 471

Query: 377 --KNHDLLPIFNASAHILGIEVC-----------KEHLNKNISIAIEKLVQERLILLKMK 423
             K    L        ILG+              K   ++N    + +LV  R       
Sbjct: 472 QIKYTQALLFKQYLYRILGVLKLVEPGCEYGVENKSESSENEKSLLNELVNLRQKTRA-- 529

Query: 424 KFSSA------------------DYIRKQ-LESKGFILEDYKNPDN 450
            F+ A                  D++R Q L + G ILED  +  +
Sbjct: 530 -FAQATLKNNLDSEATKDLLKHCDHLRDQKLPNLGIILEDCDDGTS 574


>gi|156096861|ref|XP_001614464.1| cysteine -tRNA ligase [Plasmodium vivax SaI-1]
 gi|148803338|gb|EDL44737.1| cysteine -tRNA ligase, putative [Plasmodium vivax]
          Length = 686

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 143/454 (31%), Positives = 213/454 (46%), Gaps = 65/454 (14%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N+L R   EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ 
Sbjct: 113 TGLLVNNSLTRSKVEFVPQEKNQIKWYACGPTVYDAAHLGHARTYVSFDIIRRILVNYF- 171

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V NITDIDDKII+R+ +E        + + +  K   +F +D  +L  L PT  
Sbjct: 172 KYDVFMVINITDIDDKIIKRSEEEKV------SFTELARKWECEFWEDMKKLNVLLPTAI 225

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDE--------- 172
            R + ++ Q+I+ I+ II + +AY +    + FD             +++          
Sbjct: 226 TRVSEYVDQIIHYIEKIIDNKYAYVSEEGSVYFDIDEFKKSPKHFYARMEPLSVKDETKI 285

Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G        KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V 
Sbjct: 286 LEGEGDLGVISKKKKNAYDFALWKSSKPNEPYWDSPWGKGRPGWHIECSTMASNILGSVL 345

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +
Sbjct: 346 DIHSGGVDLRFPHHDNELAQSEAFFDASQWVNYFLHSGHLHIEGLKMSKSLKNFITIKHM 405

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEAE----------ILLSK--- 336
           L         +    IR+  L+  +   ++++   + + +             LL     
Sbjct: 406 LS-------EYTPNQIRILFLLNKWDSFMNYSPNGESMVQCVEIDKFVFNFFALLEMKIK 458

Query: 337 ----------WPQTSTSKGII----DPAVLSALYNDLNTVSAIQALHKLARESTKN---- 378
                     W Q   +   +       V  AL ++ NT   I AL KL  E        
Sbjct: 459 NFHLTNSNLFWTQVDDNLNKLFRSTKSKVHQALLDNFNTPEVILALQKLITEINIYLQNE 518

Query: 379 -------HDLLPIFNASAHILGIEVCKEHLNKNI 405
                   +L    +      G+   +    KN 
Sbjct: 519 KIQIGLLLELKHYISFILDTFGLVYGQAQGEKND 552


>gi|224369114|ref|YP_002603278.1| CysS1 [Desulfobacterium autotrophicum HRM2]
 gi|223691831|gb|ACN15114.1| CysS1 [Desulfobacterium autotrophicum HRM2]
          Length = 668

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 140/475 (29%), Positives = 219/475 (46%), Gaps = 51/475 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+ NTL +K   F+     +I +Y CGPTV+   H+G AR  +  D+L R L +   + 
Sbjct: 213 LKVLNTLTQKKELFKPNKSESIGIYSCGPTVHGRIHLGEARRFVFSDLLCRYLEFSGYK- 271

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DDKIIE + + H        + + T +N  QF KD   L     T  P 
Sbjct: 272 -VNHVMNITDLDDKIIEASEKAH------MDMDLFTEENIIQFKKDLDLLGIRDATKYPL 324

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
           A+ H+ +MI L   II +G  YE    + FD S +P+YG  S   +D+  +GT V  + Y
Sbjct: 325 ASLHVEEMISLADKIIENGFGYEKLRSVYFDVSKLPSYGRLSGVDLDKMNLGTTVDLDDY 384

Query: 184 HKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K++P DF L KR    E      + + WG  RP WHI+C AM+  YL + FDIH     
Sbjct: 385 EKEDPRDFTLLKRVKLNELKKGIYYSTKWGNVRPSWHIQCPAMAMKYLSENFDIHTSARH 444

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHENEIA +      +  AN W+H G +  E  K       F+T+  +L+      
Sbjct: 445 LIFPHHENEIAIAEAVTG-KLLANYWMHCGPVMFE-DKEVDEKKRFLTVEFVLKM----- 497

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
             +    +R  +L ++Y+  + F+ +RL      L +      +   ++ A         
Sbjct: 498 -GFSERELRYWLLSSNYQRSLPFSRERLLAKRKSLKRVDDFIQALLNVENADNDSVVEDL 556

Query: 351 -------VLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHIL 392
                     A+ +DLN   A+ ++ K  R+                +++  F     +L
Sbjct: 557 AQDTIDEFTKAMDDDLNISVALASIFKTVRKGNNLIQKMEMTAQAAENIINAFKKIDAVL 616

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            +        +  +     L+  R  L K K + +AD IR +LE++G  + D  +
Sbjct: 617 NVFSFDPPFLEQDTQV---LMDRRNALRKGKDWEAADQIRVELENRGIEINDLGD 668


>gi|289739575|gb|ADD18535.1| cysteinyl-tRNA synthetase [Glossina morsitans morsitans]
          Length = 537

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 144/514 (28%), Positives = 225/514 (43%), Gaps = 74/514 (14%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  ++IYN + ++   F   +   +  Y CGPTVYD  H+G+A   +  D+L R+LR++
Sbjct: 34  IETDLRIYNCVAKRNVPFILNNQYFVTWYTCGPTVYDSCHLGHASCYVKLDILQRILRHH 93

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    V+   NITDIDDKII ++        +      +      +F  D  +L  L P 
Sbjct: 94  FNLNIVS-AMNITDIDDKIIAKSEN------LGKDWRDVARFYEAEFWTDLKKLNVLEPN 146

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            + R T+HIP++I  I+ II    AY  ++  +  D  S+ NYG      +DEQ    ++
Sbjct: 147 VKARVTDHIPKIINYIERIIKKRMAYVGDDNSVYMDVKSVKNYGKLQNISLDEQNAEEQL 206

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            EK  KK+P DF LWK      P + SPWG GRP WHIECS ++    G    IH GG+D
Sbjct: 207 -EKGIKKSPMDFALWKARKTG-PTFPSPWGDGRPAWHIECSTLAGMIFGDNVHIHAGGID 264

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKF 297
           L FPHHENE  QSC     ++  N W+H G L+++G   KMS S  N IT+ ++L     
Sbjct: 265 LRFPHHENEECQSCVYHDNKQWVNYWLHTGHLSMKGESQKMSNSLKNTITVKDML----- 319

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----------TSKGI 346
             + +     R+A  ++HYR  +D++ + +  A+  L+K+               T+ G+
Sbjct: 320 --KKYSGDDFRMACALSHYRNSMDYSDELMEMAKSNLNKFKGFRTDCLAYLSGKKTAVGL 377

Query: 347 IDPAVLSAL-----------YNDLNTVSAIQALHKLARESTKNHDL--------LPIFNA 387
            D A+   L            +D NT  +I  L       ++  +             +A
Sbjct: 378 DDSAIFENLKFAQSHIDSSIKDDFNTARSITTLMDQISSISRCINAQPGSEVQTASSLDA 437

Query: 388 SAHI----------LGIEV------------CKEHLNKNISIAIEKLVQERLILLKMKK- 424
            A +           G                +  LN  +   +      R   +  K  
Sbjct: 438 VAAVSNYVSFILQSFGFAFVTGQEHELNTTTEQFDLNALLDDILNTRKSIREKAVADKND 497

Query: 425 --FSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
             F   D +RK L   G  + D+    +     R
Sbjct: 498 HLFEICDDLRKCLLQNGIDIRDHSKGSSWTFTKR 531


>gi|224369768|ref|YP_002603932.1| CysS3 [Desulfobacterium autotrophicum HRM2]
 gi|223692485|gb|ACN15768.1| CysS3 [Desulfobacterium autotrophicum HRM2]
          Length = 759

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 131/474 (27%), Positives = 214/474 (45%), Gaps = 50/474 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +YNTL R    F+      + +Y CGPTV+        R  +  D+L R L Y     
Sbjct: 303 LTLYNTLTRSQERFEPKAQGKVAVYTCGPTVHKAMDPTRFRRFVATDLLVRYLEYRGL-- 360

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITD+DD+ I+ + +      ++  +   T  + + F KD TRL        P 
Sbjct: 361 TVNHVVNITDLDDRTIKGSER------MDMTVPEFTRPHIRSFKKDLTRLGVRPAQAYPL 414

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKY 183
            + HI  M+ + + ++  G AYE  N +  D SS+  YGS S   +D+ ++G  V  + Y
Sbjct: 415 VSEHIEDMVAVAERLVEQGVAYEKLNSLYCDISSLEGYGSLSGVNLDKIRVGATVDLDDY 474

Query: 184 HKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            K NP DF L KR    E        + WG  RP  H++C+A++  Y G  FDIH G  +
Sbjct: 475 EKDNPRDFTLLKRVGLSELKRGVCVRTKWGNVRPSLHLQCAALAMKYHGGGFDIHTGSRE 534

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHENE A S    + E  A IW+H   +  +G    ++ G      +LLE      
Sbjct: 535 LLFPHHENENAMSRALVK-EPLARIWVHCDCVTYDGSLGVETLGEVDL--DLLEKLG--- 588

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
             W   V+R  +L  HYR+P+ F+ Q L +A   L ++ +   S                
Sbjct: 589 --WEPRVVRFFLLSCHYRKPLTFSSQGLIDAGRALDRFDRCIESLSQVREGEPFPGMDQL 646

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHIL 392
              I    +S++ +DL     +  L K  +   +             ++L +F     +L
Sbjct: 647 LYDIRNGFISSMDDDLKISGVMAVLFKGVKTLNRLIACHQIDARGAREVLALFREINGVL 706

Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            I   +    K++S     L+++R       +++ AD +R+++++ G  + D K
Sbjct: 707 NI--FEFEPGKSVSHEAAALIEKREAARLSGQWTLADRLRQEIKALGVEINDKK 758


>gi|241856247|ref|XP_002416056.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215510270|gb|EEC19723.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 547

 Score =  398 bits (1023), Expect = e-108,   Method: Composition-based stats.
 Identities = 145/517 (28%), Positives = 222/517 (42%), Gaps = 86/517 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I++Y+ + R     +       + Y CGPTVYD +H+G+A   +  D++ R+L   +
Sbjct: 39  DTGIRVYDPIGRAKVPLKLQHERVAKWYSCGPTVYDSSHVGHAYTYLRTDIIRRIL-GRF 97

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V  V  ITDIDDKII RA      + + +    +  +  ++F +D  +L  L PT 
Sbjct: 98  FDVDVVMVMGITDIDDKIIARA------VQLGETPETLARRYEREFREDIAKLGVLPPTL 151

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             R + ++P ++   + +   GHAY A +  + FD S  P+YG   R       MG+ +P
Sbjct: 152 YARVSEYVPSVVRFCEVLRDKGHAYAAADGSLYFDVSQRPDYG-LFRAP----GMGSSIP 206

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++P DF LWK + P EP W SPWG GRPGWHIECSAM+S  LG   DIH GG DL
Sbjct: 207 VVGVKRDPRDFALWKGAKPGEPQWTSPWGPGRPGWHIECSAMASELLGDSVDIHTGGRDL 266

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLETK 295
            FPHHENE AQS       +    W+H G + +     +  KMSKS GN + +  +LE  
Sbjct: 267 AFPHHENEEAQSRSRHGKSRWVRHWLHMGQVMVAKGGTDAVKMSKSAGNTLPLQTVLEDH 326

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------- 345
                   A  +RL  L +HY   +    + L +A++ L+       + G          
Sbjct: 327 -------SAETLRLLCLRSHYSADVVVGPEALHQAQVNLNMLRDFCANAGSYVRGELPAR 379

Query: 346 ------------IIDPAVLSALYNDLNTVSAIQALHKLARESTK---------------- 377
                        +   +  A+ +DL+   A   + +LA                     
Sbjct: 380 ELNEPELLGQLAYLKIQLREAMADDLDYSQATARVLELASRLNGRLQGPCAQTSAAGACR 439

Query: 378 ---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV---------QERLILLKMKK- 424
                 L+ +      + G+E+       + S     LV           R   L  K  
Sbjct: 440 GAIAAALVLVSRFFGDV-GVELATRDTLASASETSTALVVDSVVAFRSAVRQHALAHKDS 498

Query: 425 ----FSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
                 + D +R QL  +G  ++D      G + + W
Sbjct: 499 SRPLLEACDSLRDQLALEGVQIKD-----RGSQSSTW 530


>gi|170049121|ref|XP_001870889.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167871024|gb|EDS34407.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 516

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 169/501 (33%), Positives = 239/501 (47%), Gaps = 77/501 (15%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
            + I+IY+  ER     Q     +     Y CGPTVYD AHIG+A   +  D++ R+LR 
Sbjct: 25  PQLIRIYSCKERAKVPLQLASDPSSFTSFYTCGPTVYDSAHIGHASCYVRLDIVQRILRD 84

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
           ++  + V+   NITDIDDKII+RA ++            ++ +  Q+F  D  RL    P
Sbjct: 85  HFRLRLVS-AMNITDIDDKIIKRAGED------GRPWQDVSRRYEQEFWGDLQRLNVRLP 137

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             + R T+HIP ++  ++ +I  G AY++ ++ + F+TS    YG        E+     
Sbjct: 138 DIRLRVTDHIPAIVGFVEALIREGFAYKSSDDSVYFETSRYSQYGKLQNIPAVEESTS-- 195

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
                 KK+ ADF LWK + P EP WESP+G GRPGWHIECS +++   GK  D H GGL
Sbjct: 196 ----EGKKSAADFALWKAAKPGEPAWESPFGPGRPGWHIECSTLATQIFGKRLDFHAGGL 251

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKK 296
           DL FPHHENE AQSCC   +      WIH G L+LEG+  KMSKS  N I+I ELLE   
Sbjct: 252 DLRFPHHENEEAQSCCYHGVPDWVQHWIHTGQLHLEGQTAKMSKSLKNTISIGELLERS- 310

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
                  A   R+  L++HYR  I+F  Q +T A  +L K+                   
Sbjct: 311 ------SADEFRMLCLLSHYRSAIEFGDQSMTVATNVLRKFHSFFDDSKAYVSGVKPATV 364

Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL-----------------ARESTK 377
                  ++   ID  +   L ND NT SAI +L  L                 A ES  
Sbjct: 365 INSADLQSTLQEIDLKIDEFLRNDFNTASAITSLGDLASVVHKSINQKPPEAVQASESGT 424

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNISIA------IEKLVQERL----ILLKMKK--- 424
              +        ++ G+E   E+    IS        I+ +VQ R       ++ K    
Sbjct: 425 VQAVTNYIRDKLNLFGLEAFGENRKSEISSKDSTGQIIDSVVQIRNSVRGQAIESKDRRL 484

Query: 425 FSSADYIRKQLESKGFILEDY 445
           F+  D +R QL+  G  ++D+
Sbjct: 485 FAVCDQMRNQLKQAGVEVKDH 505


>gi|145330001|ref|NP_001077986.1| SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA
           ligase/ nucleotide binding [Arabidopsis thaliana]
 gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 401

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 144/400 (36%), Positives = 201/400 (50%), Gaps = 66/400 (16%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
             +L CL P+ QPR ++HIPQ+I LI+ I+ +G+AY+ + +I F     P YG  S RK+
Sbjct: 1   MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 60

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           ++ + G RV     KK+PADF LWK +   EP WESPWGRGRPGWHIECSAMS+ YLG  
Sbjct: 61  EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 120

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DL+FPHHENEIAQSC A      +  WIHNGF+ ++  KMSKS GNF TI +
Sbjct: 121 FDIHGGGMDLVFPHHENEIAQSCAACDSSNIS-YWIHNGFVTVDSEKMSKSLGNFFTIRQ 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------- 339
           +++        +    +RL ++ THYR PI+++   L  A   +    Q           
Sbjct: 180 VIDL-------YHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGE 232

Query: 340 -------------TSTSKGIIDPAVLSALYNDLNTVSAIQA-------LHKLA------R 373
                        T TS        ++++ +DL T   + A       ++ L       +
Sbjct: 233 KDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKK 292

Query: 374 ESTKNHDLLPI---FNASAHILG---------IEVCKEHLNKNI---SIAIEKLVQERLI 418
           ++ +   L  +         ILG         +E  KE   K        + + VQER  
Sbjct: 293 QARREESLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTD 352

Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
             K K++  +D IRK L   G  L D          T W+
Sbjct: 353 ARKNKEYERSDAIRKDLAKVGIALMDS------PEGTTWR 386


>gi|149635956|ref|XP_001514971.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 522

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/504 (29%), Positives = 225/504 (44%), Gaps = 98/504 (19%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y CGPTVYD AH+G+A   + FD++ R+L   +G   VT V  ITDIDDKII+RA +   
Sbjct: 22  YSCGPTVYDHAHLGHACSYVRFDIIRRILTKIFGINLVT-VMGITDIDDKIIKRANE--- 77

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
              +N +   +     + F +D   L  L PT   R T +IPQ+I  I+ II +GHAY  
Sbjct: 78  ---LNISPIALARLYEEDFKEDMAALKVLPPTVYMRVTENIPQIISFIERIIANGHAYST 134

Query: 149 N-NEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           N   + FD  +  + YG+      D        P    K++P+DF LWK + P E  W S
Sbjct: 135 NQGNVYFDLKARGDKYGTLVGMTSDP----REEPADSDKRHPSDFALWKAAKPQEIFWTS 190

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECS +SS   G   DIH GG+DL FPHHENEIAQ     +  +  N ++
Sbjct: 191 PWGNGRPGWHIECSTISSLIFGSQLDIHSGGIDLAFPHHENEIAQCEVYHQCSQWGNYFL 250

Query: 267 HNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           H+G L+++G   KMSKS  N+ITI + L       + +     RL  +   YR  I+++ 
Sbjct: 251 HSGHLHVKGKEEKMSKSLKNYITIKDFL-------KKFSPDEFRLFCMRGSYRSAIEYSE 303

Query: 325 QRLTEAEILL----------SKWPQTSTSKGIIDPAVL------------SALYNDLNTV 362
             + EA+ LL            + +       I   +L            +AL +D +T 
Sbjct: 304 DSMQEAKHLLLGMSSFISDARDYMRGQLLCNPIREDILWERLASTKVNIKAALADDFDTR 363

Query: 363 SAIQALHKLARESTKNHD-----------------LLPIFNASAHILGIEVC------KE 399
            A+ A+  L R                        ++          GI +       ++
Sbjct: 364 RAVDAIMDLIRHGNSQLTAVTKETGSPRSPAVYGSIVSFIQEFCDTFGISLAGGQFVSEQ 423

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSA-----------------------DYIRKQLE 436
             +  +   +++LVQ RL +     ++ A                       D +R+ L 
Sbjct: 424 RNSATLQRVVDELVQFRLQVRT---YALALPEAPPERRRQLLRERTPLLQACDALRRDLA 480

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
             G  ++D  N  +      W+ +
Sbjct: 481 LCGINIKDRSNTTS-----TWEMQ 499


>gi|67623595|ref|XP_668080.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis TU502]
 gi|54659275|gb|EAL37860.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis]
          Length = 425

 Score =  398 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 124/340 (36%), Positives = 182/340 (53%), Gaps = 24/340 (7%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + + N++    TEF  ++   +  Y CGPTVYD AH+G+AR  + FD++ R+L  Y+
Sbjct: 37  STGLMLNNSMTGGKTEFIPVNGRRVNWYACGPTVYDSAHLGHARNYVTFDIIRRVLEDYF 96

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G      V NITDIDDKII+R+ ++     ++     +  +   +F  D   L    P  
Sbjct: 97  GYDVYL-VMNITDIDDKIIKRSNEQKRENFLD-----LAREFELEFFDDMKALNVKMPDV 150

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQKMG 176
             R +  IP++I  I  II  G AYE+   + FD  S        YG    + + +    
Sbjct: 151 ITRVSEFIPEIIDFISTIISRGFAYESEGSVYFDVESFRADEKHVYGRMEPKSVADVNRL 210

Query: 177 TRVPEKY-----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                +       KK+P DF LWK++ P EP W+SPWG+GRPGWHIECS M+S+ LG   
Sbjct: 211 LEGEGELGEHLKDKKSPLDFALWKKAKPEEPCWDSPWGKGRPGWHIECSVMASNTLGFPI 270

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++ G KMSKS  NF TI E+
Sbjct: 271 DIHSGGIDLRFPHHDNELAQSEAHYDQAQWVNYFLHSGHLHIHGSKMSKSLKNFTTIQEI 330

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR-LTEA 330
           L       +      IR+  L+  +  P++++ +  L EA
Sbjct: 331 L-------KENSPRHIRMLFLLHKWDAPMNYSPETSLQEA 363


>gi|118084394|ref|XP_416955.2| PREDICTED: similar to MGC88928 protein [Gallus gallus]
          Length = 624

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 134/401 (33%), Positives = 193/401 (48%), Gaps = 44/401 (10%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           YN+  R               Y CGPTVYD AH+G+A   + FD++ R+L  ++ E  V 
Sbjct: 43  YNSRSRSKEPLVLAKDGVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRFF-ETEVI 101

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
            V  ITDIDDKII RA +      +N +   +     + F +D   L  L PT   R T 
Sbjct: 102 MVMGITDIDDKIIRRANE------MNISPVALARIYEEDFKQDMASLKVLPPTVYMRVTE 155

Query: 128 HIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHK 185
           +IPQ+I  I+ II +G AY  +   + FD +S    YG  +    D Q           K
Sbjct: 156 NIPQIISFIKTIIANGQAYATSQGNVYFDVNSWGERYGVLTAVSPDTQG----EAVDTDK 211

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++  DF LWK + P E  W SPWG+GRPGWHIECS +SS   GK  DIH GG+DL FPHH
Sbjct: 212 RHGRDFALWKAAKPQELSWSSPWGKGRPGWHIECSTISSAVFGKQLDIHTGGIDLAFPHH 271

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWP 303
           ENEIAQ     + E+  N ++H+G L+++G   KMSKS  N+ITI + L       + + 
Sbjct: 272 ENEIAQCEVYHQCEQWGNYFLHSGHLHVKGSQEKMSKSLKNYITIKDFL-------KKFS 324

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------DP------- 349
           +   R+  L + Y   ++F+ + + +A+ +L                    DP       
Sbjct: 325 SDQFRMFCLRSRYSSAVEFSDETMNDAKNVLQAISSFIRDANAYIKGQLVCDPVREDVLW 384

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
                    V +A  +D +T  A+ A+  L     +    +
Sbjct: 385 ERLASTKVNVKAAFADDFDTSRAVAAIMDLIHHGNRQLKAV 425


>gi|195941732|ref|ZP_03087114.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi 80a]
          Length = 480

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 142/489 (29%), Positives = 224/489 (45%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+   + 
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  ++     L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ +         L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|269861043|ref|XP_002650237.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066327|gb|EED43813.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 500

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 160/505 (31%), Positives = 240/505 (47%), Gaps = 74/505 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            K I +Y+++ +K  EF   DP+N++MYVCGPTVYD  HIG+AR  I FD++ ++L  Y+
Sbjct: 3   NKSILLYDSISKKKIEFIPDDPTNVKMYVCGPTVYDSPHIGHARTYISFDIIRKILENYF 62

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  VT+V NITDIDDKII R++++      N     ++    ++F  D  +L    P  
Sbjct: 63  -EYNVTFVMNITDIDDKIIIRSKEK------NLDPIQLSQIYEKEFFDDMDKLKVKRPDF 115

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRRKIDEQKMGTR 178
             R T HIPQ+I  IQ +  +G  Y +N  + FD         Y       I++  + T 
Sbjct: 116 ITRVTEHIPQIINFIQKLENNGLTYVSNGSVYFDLKKYKKIFKYNVLRLSGIEQHLIDTT 175

Query: 179 VP--EKYHKKNPADFILWKRS-TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V       KK+  DF LWK      E  + SPWG GRPGWHIECS MS+H  G   DIHG
Sbjct: 176 VKSIISTEKKSLDDFALWKNVVNKDELKFHSPWGEGRPGWHIECSVMSTHIFGSKLDIHG 235

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL+FPHHENEIAQ C     +     ++H G LN++GRKMSKS  NF+TI+E++   
Sbjct: 236 GGIDLMFPHHENEIAQ-CQGYFNDTWVKYFLHTGHLNIDGRKMSKSLKNFLTISEIIN-- 292

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
                ++    IR+  L  H+  P++++ ++L  A++   K     ++   I        
Sbjct: 293 -----NYSGITIRILFLQHHWNSPMNYSEEQLKRADVTRKKIFNFISTAESIITQQKLNN 347

Query: 348 -----------------DPAVLSAL-----------YNDLNTVSAIQALHKLARESTK-- 377
                            D  + + L            +++N   A   +  L        
Sbjct: 348 INNFQKSNPYIRSMTSVDKELYAVLLNTKQIIDKHFRDNINFSDAFLEITNLITNVNTVI 407

Query: 378 -------NHDLLPIFNASAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
                   +++L        I GI    ++  E   K  +I     +Q R  L     F 
Sbjct: 408 SDLSTDILYNILTYIKKILDIFGIIEDHQIQDELSEKFANILNNFRMQIRQSLRNKATFK 467

Query: 427 S----ADYIRKQLESKGFILEDYKN 447
                 D IR ++++ G+ +ED K+
Sbjct: 468 ELFTICDKIRDEVKTVGYQIEDTKD 492


>gi|330816203|ref|YP_004359908.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327368596|gb|AEA59952.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 457

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 145/441 (32%), Positives = 220/441 (49%), Gaps = 31/441 (7%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   I++YNT+ R+ +  +   P  + +YV GPT++D AH+GN RP +VFDVL RLLR +
Sbjct: 1   MNAPIQLYNTITREKSPLRTPVPGRVTLYVGGPTLHDHAHLGNVRPAVVFDVLARLLRLH 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y    V +V  + D+DD+I   A      +   +++   T++    + +D   L  LAP 
Sbjct: 61  Y--PDVLHVGRLADVDDRIHAAA------LAAGESVEAFTARYRDAWREDLDALGVLAPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PRA+  +  ++     ++  GHAY     ++F   S P +G    R +++     R  
Sbjct: 113 VEPRASEQVAGVVEQAARLLERGHAYIEAGHVLFHVPSYPGHGRLCGRPVEDMIALARGE 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               +++P DF+LWK +    P W SPWG GRPGWH +C+++    LG+  DIHGGG DL
Sbjct: 173 PAPRRRHPLDFVLWKPAEHGFPAWPSPWGAGRPGWHAQCTSILERELGREIDIHGGGQDL 232

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           I PHHENEIAQ  CA+        W+HN FL +  +KMSK   N +T+  L E       
Sbjct: 233 IHPHHENEIAQLACANG-RPPNRTWLHNAFLTVNWQKMSKPLRNVVTLRALRERA----- 286

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IIDPAVL 352
                 IRLA+L  HYR+P+++ +QRL+ A   L++      +            D AVL
Sbjct: 287 --SGEAIRLALLSVHYRQPLNWNLQRLSSARRTLTRGYHVLAAARGTRVDTAVEPDEAVL 344

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
           +AL NDLN  +A+  L+ L               A + +L        L +    A+ +L
Sbjct: 345 AALRNDLNVPAALARLNGLLAAVDGAATESARIRAKSRLLASARPLGLLQRAPESALREL 404

Query: 413 VQE---RLILLKMKKFSSADY 430
             E   R    +    + AD 
Sbjct: 405 GAEAVPRERARR----APADE 421


>gi|145547719|ref|XP_001459541.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124427366|emb|CAK92144.1| unnamed protein product [Paramecium tetraurelia]
          Length = 668

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 151/554 (27%), Positives = 238/554 (42%), Gaps = 115/554 (20%)

Query: 3   KKIKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +K+ N+L+   +  F  I+   +  Y CGPTVY  +H+G+AR  +  DV+ R LR Y+
Sbjct: 35  TGLKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLRDYF 94

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               ++ V NITDIDDKII  A                T    + F      L    P  
Sbjct: 95  HYDLLS-VMNITDIDDKIITGANA------AKQDFLEFTKVWEKDFFDAMEALNIELPDV 147

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS--------FSRRKIDEQ 173
             R ++++P+++  IQ II +G+AYE+N  + F+       G          +   + E 
Sbjct: 148 ITRVSDYVPEIVTFIQKIISNGYAYESNGSVYFEVQKYIADGHTYPKMRPEVNAELLQEG 207

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           +  ++V ++  KK+P DF LWK S P EP W+SPWG GRPGWHIECS M+S  LG   D+
Sbjct: 208 EGESQVNKQSEKKSPYDFALWKASKPEEPKWQSPWGEGRPGWHIECSVMASAILGNPIDL 267

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DL+FPHH+N +AQ+      E+  N +IH G LN+  RKMSKS  NF+TI E+L 
Sbjct: 268 HAGGIDLLFPHHDNSLAQAEACFNCEQWINYFIHLGHLNIADRKMSKSLKNFMTIEEVL- 326

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------------EILLSKWPQT 340
                 + +    +RL   +  Y  P +++ +++ +A               +  +  Q 
Sbjct: 327 ------KRYTPRQVRLNFAIHQYDAPQNYSEEQMEQAIAKDKSYQEFFQNTKIYLRQSQV 380

Query: 341 STSKGIIDPAV-------------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI--- 384
           + ++   +                  AL N+ +  + + A  KL  +         +   
Sbjct: 381 TDAQKWTENDFQLSALFRSTKQIIHQALTNNFDFPTVVDATDKLINQVNIQIAAKNVRAP 440

Query: 385 --------FNASAHILGIEVC--------------------------------------- 397
                    N    +LGI                                          
Sbjct: 441 LISSVVNYVNFIFGLLGINYQTLFSNQIDIQPLMEQVCSIRDKVKVAARNNDFESITNAV 500

Query: 398 -------KEHLNKNISIAIEKLVQERLILLKMKK----FSSADYIRK-QLESKGFILEDY 445
                  +++++ ++  AI +  QE L+  + K     F   D +R  QL + G  +ED 
Sbjct: 501 SQKQLEYEKNISNHLVDAINQFQQEVLVASQNKNKQQIFQLCDKLRDQQLFNLGIKIED- 559

Query: 446 KNPDNGQRMTRWKQ 459
           K+ D       WKQ
Sbjct: 560 KDKDQASV---WKQ 570


>gi|218249402|ref|YP_002375106.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223888983|ref|ZP_03623574.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224533521|ref|ZP_03674110.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226321905|ref|ZP_03797431.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|226735049|sp|B7J2G1|SYC_BORBZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|218164590|gb|ACK74651.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|223885799|gb|EEF56898.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|224513194|gb|EEF83556.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|226233094|gb|EEH31847.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|312148140|gb|ADQ30799.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 480

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 143/489 (29%), Positives = 225/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+   + 
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +   ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLDNK-WCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ + E+      L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|312381823|gb|EFR27474.1| hypothetical protein AND_05800 [Anopheles darlingi]
          Length = 1017

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 161/526 (30%), Positives = 241/526 (45%), Gaps = 96/526 (18%)

Query: 1    MKKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
            +  ++++Y+   ++     +I+P    +  Y CGPTVYD AHIG+A   +  D+L R+L+
Sbjct: 503  LTTELRLYDGKTKEKVPL-SINPQKPFLSFYTCGPTVYDSAHIGHASCYVRLDILQRILK 561

Query: 59   YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            +++    VT   NITDIDDKII RA +             +  K   +F  D T L    
Sbjct: 562  HHFQLPLVT-AMNITDIDDKIIARANER------GMDWQALARKYEAEFWNDLTNLNVQP 614

Query: 119  PTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            P  + R T HIP ++  +Q +I  G+AY A+   + F+TS    YG   +  ++  +   
Sbjct: 615  PDVKLRVTEHIPAIVRFVQTLIDKGYAYRADDGSVYFETSKYERYGKLQKVILEPAQ--- 671

Query: 178  RVPEKYHKKNPADFILWKRSTPMEPGWESPW-----GRGRPGWHIECSAMSSHYLGKVFD 232
               E   K++P+DF LWK S P EP W           GRPGWHIECS M+SH  GK  D
Sbjct: 672  ---ESRFKRHPSDFALWKASKPGEPAWSGEGEAVSVTSGRPGWHIECSTMASHVFGKRLD 728

Query: 233  IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINE 290
             H GGLDL FPHHENE  QSCC   +      WIH G L+LEG+  KMSKS  N I+I+E
Sbjct: 729  FHAGGLDLRFPHHENEETQSCCYHDVPDWVTHWIHTGQLHLEGQTHKMSKSLKNTISISE 788

Query: 291  LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------- 337
            LL       +   A   R+  L++HYR  I++  + +  A  +L K+             
Sbjct: 789  LL-------QEHTADEFRMLCLLSHYRSVIEYGSESMATASNVLRKFISFFQDSKAYVDG 841

Query: 338  ------PQTSTSKGIID------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
                     S+ + + D        V + L ND NT +++ AL  L   + K  +     
Sbjct: 842  LKPQTYGNGSSEENLFDCLAKTRNIVEACLTNDFNTANSVLALSDLISTAQKAINGNEQL 901

Query: 386  NASAH-----------IL-------------GIEVCKEHLNKNISIAIEKLV-------- 413
               AH           +L             G++  +   ++ I+ AI+  +        
Sbjct: 902  GDGAHPRLIGASNIGAVLAVTRYVREQLLSYGLQSFERSTHRQINGAIQLPIVDSVVEAI 961

Query: 414  -----QERLILLKMKK---FSSADYIRKQLESKGFILEDYKNPDNG 451
                 + RL  L+ K    F   D +R  L++ G  L+D+    + 
Sbjct: 962  VKTRAEIRLRALETKDKQLFLVCDQLRNSLKTAGIELKDHGKTSSW 1007


>gi|153217385|ref|ZP_01951136.1| cysteinyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124113603|gb|EAY32423.1| cysteinyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 314

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 118/327 (36%), Positives = 166/327 (50%), Gaps = 37/327 (11%)

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
           S    YG  S++ +D+ + G RV  +  K++P DF+LWK S P EP WESPWG GRPGWH
Sbjct: 2   SQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWH 61

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           IECSAM+S  LG  FDIHGGG DL FPHHENEIAQSCCA    +  N W+H+G + ++  
Sbjct: 62  IECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDT-QYVNTWMHSGMVMVDKE 120

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GNF TI ++L         + A  +R  ++  HYR  ++++ + L +A   L +
Sbjct: 121 KMSKSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLER 173

Query: 337 WPQTSTSKGIIDPA---------VLSALYNDLNTVSAIQALHKLARESTK--------NH 379
                       PA           +A+ +D NT  A   L  +ARE  +          
Sbjct: 174 LYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNAS 233

Query: 380 DLLPIFNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
            L  +    A ++GI         +       +  IE L++ R      K +++AD  R 
Sbjct: 234 ALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARD 293

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
           +L   G +LED      G   T W++K
Sbjct: 294 KLNEMGIVLED------GPNGTTWRRK 314


>gi|221218126|ref|ZP_03589592.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|221192074|gb|EEE18295.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
          Length = 480

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 144/489 (29%), Positives = 226/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+   + 
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ + E+      L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|258570935|ref|XP_002544271.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237904541|gb|EEP78942.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 692

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 142/460 (30%), Positives = 209/460 (45%), Gaps = 62/460 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L RLLR Y
Sbjct: 24  PPLKIWNSLTRSKVPFVPLDPEGRKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQE-------HPSIPINDAISI---ITSKNTQQFVKD 110
           + +  V ++ NITD+DDK   +A          H S    +  SI   +T +   +F+ D
Sbjct: 84  F-KFDVRFIMNITDVDDKPDTKADVMLAYLDKLHGSSICGEDYSIFTKLTKRFEDRFMAD 142

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRR- 168
              L  +      R +  IP+++  ++ I+ H  AY   +  + FD ++    G+   R 
Sbjct: 143 ARALNIIDADEVTRVSEFIPEIVSFVEQIVQHNFAYVTGDGSVYFDIAAFETVGNHYARL 202

Query: 169 --------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
                    +     G  + +   K++ ADF LWK S P EP W SPWG GRPGWHIECS
Sbjct: 203 EPWNRNDTALQADGEGALINKSIEKRSKADFALWKASKPGEPSWPSPWGPGRPGWHIECS 262

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKTANIWIHNGFLNLEGR 276
           AM+S  LGK  DIH GG+DL FPHH+NE+AQS          ++  N ++H G L+++G 
Sbjct: 263 AMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQWVNYFLHMGHLSIQGS 322

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS  NF TI E LE        W    +R+  LM  + + I+ T   +        K
Sbjct: 323 KMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGSWADGIEITEDLVKAGNAWEEK 377

Query: 337 WPQ--------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
                                   +        AV  +L +  NT  A+ A+  L  +  
Sbjct: 378 LNNFFLSVRNSSETMTPSSTDDSLADQLKAAQKAVHESLCDSFNTAGAMIAISGLVTQYN 437

Query: 377 KN----------HDLLPIFNASAHILGIEVCKEHLNKNIS 406
                        D+     +  +ILG+       ++ I 
Sbjct: 438 SADKSTLNPQHIKDVAKWVTSIVNILGLNGSAGPDSEEIG 477


>gi|312149265|gb|ADQ29336.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 480

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 145/489 (29%), Positives = 225/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS    YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKGYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  +I++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  ++I     ++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ + E+      L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|225549500|ref|ZP_03770466.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|225369777|gb|EEG99224.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
          Length = 480

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 144/489 (29%), Positives = 226/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  +  D+L + LR+   + 
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ + E+      L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNIAQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|216264257|ref|ZP_03436249.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980730|gb|EEC21537.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 480

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 145/489 (29%), Positives = 226/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTRDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  +I++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  ++     L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ + E+      L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|119953383|ref|YP_945592.1| cysteinyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254765179|sp|A1R030|SYC_BORT9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119862154|gb|AAX17922.1| cysteinyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 481

 Score =  395 bits (1015), Expect = e-107,   Method: Composition-based stats.
 Identities = 144/490 (29%), Positives = 219/490 (44%), Gaps = 51/490 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT  + ++E +      I++Y CGPTVY++AHIGN R  I  D+L + LR    + 
Sbjct: 3   LRLYNTKTKSLSEVKNFSD--IKVYACGPTVYNYAHIGNFRTYIFEDLLIKSLRLL--KY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     E    E   +         +  I+   T+ F  D  +L  + P 
Sbjct: 59  NVNYAMNITDIGHLTGEFDEGEDKVVKAARERGLTVYEISRFFTEAFFCDCEKLNIVRPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
               A+ +I  MI +I+ +  +G  Y  N  + FDTS   +YG  +   +++ +  +  R
Sbjct: 119 KVLIASEYIASMIEVIKVLEQNGFTYFVNGNVYFDTSLFKSYGQMAGINLNDFEFSSVSR 178

Query: 179 VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     KKN +DF+LW    +    E  W+SPWG G P WH+EC+AM+        DIH 
Sbjct: 179 VEVDPSKKNKSDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLDCFRSTLDIHL 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIA + C        +I++H  FL +E  KMSKSN NFITI +L    
Sbjct: 239 GGVDHIGVHHINEIAIAECYLN-RMWCDIFVHGEFLIMEDEKMSKSNNNFITIQDL---- 293

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGIID--- 348
                 +     R   L  HYR  + FT   L   ++     L+K     +S    D   
Sbjct: 294 --ETNGFSPLDFRYFCLTAHYRTQLKFTFNNLRACKVARKNMLNKLTAVFSSLNQFDLLL 351

Query: 349 -----------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAH 390
                             + L  +  DL+   A+  L  + ++        L +      
Sbjct: 352 LSKNYENIESVLEKRYYDSFLEKIAFDLSIPQALALLWDIIKDDNLSALSKLRLTFKFDE 411

Query: 391 ILGIEVCKEHLNK------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L + + +    +      NI  A+  L++ER +    K F  AD IR+   SKGF+L D
Sbjct: 412 VLSLGLKEGVFREIEKDRINIDDAMNSLLEERRLAKIRKDFKRADEIREYFYSKGFVLID 471

Query: 445 YKNPDNGQRM 454
            +     +R 
Sbjct: 472 TEEGTKVKRG 481


>gi|219115755|ref|XP_002178673.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410408|gb|EEC50338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 647

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/523 (28%), Positives = 229/523 (43%), Gaps = 86/523 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             ++ I N+L R+   F  +D S  +  Y+CGPTVY  +H+G+AR  + FD++ R+L  +
Sbjct: 31  DPRLWITNSLTRQKEHFLTMDGSSRMVWYMCGPTVYAPSHMGHARTYLGFDIIRRILERH 90

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G   VT V N+TDIDDKIIERA ++H           +  +   +F +D   L    PT
Sbjct: 91  FG-YHVTLVMNVTDIDDKIIERAAEQHV------GHLQLARRYEAEFHQDMADLGVAPPT 143

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQKM 175
              R T ++ ++   I NII  G AYE+N  + FD  +  +     Y   +  ++   ++
Sbjct: 144 TLTRVTEYMDEVTAYIANIIQRGFAYESNGSVYFDVQTFSDTPHMHYCKLAPEQVGNAEL 203

Query: 176 GTRVPEK------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
                 K        K++P DF LWK++ P EP W+SPWG GRPGWHIECS M+S  L +
Sbjct: 204 LAEGEGKLTQDFVTDKQSPRDFALWKKTKPGEPSWDSPWGPGRPGWHIECSVMASDVLDR 263

Query: 230 -----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
                  D+H GG+DL FPHH+NE+AQ+       +  N ++H G L+++G KMSKS  N
Sbjct: 264 LLQHRRMDLHSGGVDLKFPHHDNEMAQAEAECGETQWVNYFVHAGHLHIKGLKMSKSLKN 323

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
           FITI + LE          A  IR+  L+  Y   +D+    +T A     ++ +     
Sbjct: 324 FITIQQALEIN-------SARQIRMLFLLHKYNAQMDYGDNTMTHAMETEKRFVEFFHNV 376

Query: 340 ---------------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
                                   +       V  AL +D +T +A+  L  L R +   
Sbjct: 377 KACLRQHRMDDSQKWDATTIRLQQTLAAAKTKVHDALRDDFDTPTAMSVLVDLVRATNIY 436

Query: 379 -----------HDLLPIFNASAHILGI----------EVCKEHLNKNISIAIEKLVQERL 417
                       ++           G+          E       + +   ++ L+  R 
Sbjct: 437 VEGDTVVNLVVRNVASYVTDIFRTFGLVGSEDVGFATESGGASREETLGPVLDALMNFRA 496

Query: 418 ILL-KMKK------FSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
            +  K +           D  R   L + G  LED  +    +
Sbjct: 497 AVRDKARSQDVGGVLDLCDAFRDLHLPNLGIRLEDKADGSVWK 539


>gi|156543451|ref|XP_001601176.1| PREDICTED: similar to Albumin [Nasonia vitripennis]
          Length = 515

 Score =  394 bits (1014), Expect = e-107,   Method: Composition-based stats.
 Identities = 160/501 (31%), Positives = 228/501 (45%), Gaps = 72/501 (14%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  + +YN + +  T     +      Y+CGPTVYD AHIG+A   + FD++ R+L  ++
Sbjct: 33  ETNVVVYNPITKCKTPLILRNNKVATWYMCGPTVYDSAHIGHACTYVKFDIIRRILSEFF 92

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V  V  +TDIDDKII+RA +         +   IT K  ++F+ D   L  L P  
Sbjct: 93  -DINVVLVMGLTDIDDKIIKRANES------GQSWQSITQKYEKEFISDMDSLNVLKPFA 145

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             + TN+IPQ++  ++ I+    AY   +  + FDTS+  NYG       D  +     P
Sbjct: 146 TCKVTNYIPQIVEFVEKIVNKNGAYVGKDGSVYFDTSNYRNYGKL-----DTPQAQEPHP 200

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++  DF LWK S   EP WESPWGRGRPGWHIECSA++S  LG   DIH GG+DL
Sbjct: 201 D---KRSSLDFALWKASKENEPYWESPWGRGRPGWHIECSAIASTVLGSNIDIHSGGMDL 257

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKFGG 299
            FPHHENE AQSCC     +  N W+H G L+LEG  KMSKS  N ++I  LL+T+    
Sbjct: 258 AFPHHENEEAQSCCYHEKNQWINYWLHTGHLHLEGDTKMSKSLQNTVSIPSLLKTQ---- 313

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------- 338
               A   R+  L++ YR+ + F+   +  A   L K                       
Sbjct: 314 ---TANQFRMLCLLSDYRKNVIFSKTLVHTAITTLKKIEFFTSDCNEYICGKLDCGNVNS 370

Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA------SAHI 391
            +           V SAL +D +T  A+ A+ KL     K      +  A       A +
Sbjct: 371 VELLKCLEDTRQEVNSALADDFDTAKAMHAILKLISLGNKMIQAKHVTTAARETGSIAAV 430

Query: 392 ----------LGIEVCKEHLNK-NISIAIEKLVQERLI------LLKMKK---FSSADYI 431
                     LGI          +IS  ++  V  R            K      + D +
Sbjct: 431 SNYVQSVISKLGISQSMGSKQSNDISHVLDITVAFRNEIRSIALAKSEKDVESLKACDNL 490

Query: 432 RKQLESKGFILEDYKNPDNGQ 452
           RK L   G  + D +   +  
Sbjct: 491 RKNLSDFGVDIRDRQGKSSWT 511


>gi|225552408|ref|ZP_03773348.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371406|gb|EEH00836.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 480

 Score =  394 bits (1013), Expect = e-107,   Method: Composition-based stats.
 Identities = 144/489 (29%), Positives = 227/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +    + Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLIASKHIPIMIEVVKILEEKKNTYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFL-DKKWCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ + E+      L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVSQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|196006167|ref|XP_002112950.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
 gi|190584991|gb|EDV25060.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
          Length = 532

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 142/512 (27%), Positives = 216/512 (42%), Gaps = 87/512 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              IK+YN+L                 Y+CGPTVYD  H+G+A   + FD++ R++   +
Sbjct: 34  DTGIKVYNSLTNSKVSLILPQDKLATWYMCGPTVYDSPHLGHASSYVKFDIIRRIMTDLF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  +  V  ITDIDDKI++RA               +  K  ++F++D   L  L  T 
Sbjct: 94  -DIDIVMVMGITDIDDKIVQRAADTKT------GFRDLARKYEKEFLEDMECLNVLRATR 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSF--SRRKIDEQKMGT 177
             R T HI  +I  I+ I  HG+AY+ ++  + F T    + YG    SR+ I +     
Sbjct: 147 VTRVTEHIDHIIKFIEKIFQHGYAYKTSDGSVYFYTEKYGDRYGKLAPSRQTIHK---SI 203

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
                  K +  DF LWK +   EP W+SPWG GRPGWHIECSAMSS   G   DIH GG
Sbjct: 204 DKATDSEKISDRDFALWKAAKADEPCWQSPWGSGRPGWHIECSAMSSAIFGNQLDIHTGG 263

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL+FPHHENEIAQ     +I +  N ++H G L++   KMSKS  NF+TI + L     
Sbjct: 264 IDLLFPHHENEIAQCEAYHQINQWTNYFLHTGHLHIAKEKMSKSLRNFVTIKDYLNLN-- 321

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------- 337
                     R   L++ YR P ++      +AE++  K+                    
Sbjct: 322 -----SPDQFRTLCLLSKYRSPTEYNSDIFKKAEVVHQKFSSYINDAKAYVDGSINSLIA 376

Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHD 380
              +      +    V  AL +D +T +AI  L  L   +                ++  
Sbjct: 377 SESEILEKLAMTKSQVRIALADDFDTPTAINYLLNLLSFANVHSNTTTKSKRSYTARSPS 436

Query: 381 LLPI----FNASAHILGIEVCKEHLNKNISI-AIEKLVQERLILL-------KMK----- 423
           ++              G+    +     +S   ++ +V  R  +        K +     
Sbjct: 437 VIAAVSTYVEKLLSSFGLSRQDDKRYSPLSESVVDSVVGFRSNIRNYALDKLKNRLKLPS 496

Query: 424 KFSSA------------DYIRKQLESKGFILE 443
            + S+            D  R  L + G I++
Sbjct: 497 DYESSKNPDCSYLLDLCDNYRNDLLNAGIIVK 528


>gi|219685228|ref|ZP_03540048.1| cysteine--tRNA ligase [Borrelia garinii Far04]
 gi|219673324|gb|EED30343.1| cysteine--tRNA ligase [Borrelia garinii Far04]
          Length = 480

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 148/489 (30%), Positives = 227/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  R  +E    + +N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTRDFSELA--NFANVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F KD  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISKFFTEAFFKDCRKLNVVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+    +RV
Sbjct: 119 KVLIASKHIPNMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTFSRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS+GNFIT+ +L E   
Sbjct: 239 GVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSHGNFITVKDLEE--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F+   L  ++I     +++      S    D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASLDPADLNML 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNAS 388
                            + +  +  DLN    +  L ++ +           L  IF+  
Sbjct: 352 NKDLKNFGFSAEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLKLAFIFDEI 411

Query: 389 AHI-LGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             + L  E+ K+  N N  +   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKKSENHNVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKGFVLIDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|15594944|ref|NP_212733.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|224532694|ref|ZP_03673311.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|6831681|sp|O51545|SYC_BORBU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|2688519|gb|AAC66952.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi B31]
 gi|224512312|gb|EEF82696.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 480

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 143/489 (29%), Positives = 224/489 (45%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ +         L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|158521179|ref|YP_001529049.1| cysteine synthase [Desulfococcus oleovorans Hxd3]
 gi|158510005|gb|ABW66972.1| cysteine synthase [Desulfococcus oleovorans Hxd3]
          Length = 771

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 130/487 (26%), Positives = 210/487 (43%), Gaps = 58/487 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + ++NTL R+   F  +      +Y CGPTV+    +G  R M+  D+L R L Y  
Sbjct: 300 KSGVVLFNTLTREKEAFAPLAQGKASIYSCGPTVHARMDLGQCRRMVFADLLCRYLVYRG 359

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V ++ NITD DD+ IE A++          ++  T      F  D   L       
Sbjct: 360 FE--VRHIVNITDFDDRTIEGAQK------AGMDLAAFTGTYIDLFKADLKTLRVHPADA 411

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
            P A+   P+M+ L++ ++  G AYE    + FD +S   YG  S    ++ ++G  V  
Sbjct: 412 YPLASQEAPEMVALVEKLVDRGVAYEKLRSVYFDIASAEGYGGLSNIDTNKIRLGATVDL 471

Query: 181 EKYHKKNPADFILWKRSTPMEP--GW--ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++Y K+NP DF L KR+   E   GW  ++ WG  RP  HI+C+A+S  YLG  FDIH G
Sbjct: 472 DEYEKENPRDFTLLKRAKMSELKQGWYLKTRWGNVRPSLHIQCAAISRKYLGDRFDIHTG 531

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
             DL+FPHHENEIA +  A   E  A  W+H   + LE            T+ + L+   
Sbjct: 532 SRDLVFPHHENEIAIARAATGREP-ARYWVHCDSV-LESDDSVHWKTARTTLEQALDM-- 587

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT-------------------EAEILLSKW 337
                +    +R  ++  HYR+ + F+  R+                     A       
Sbjct: 588 ----GFTGRQLRYWLISGHYRKALSFSADRIAAAASALARLDGCVRSLADLAANPSAESA 643

Query: 338 PQTSTSKGIID-------PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------- 380
            Q   ++  +D          + A+ +DLN  +A+  + K  +      D          
Sbjct: 644 RQMEGAEQDVDQLLYDIRQGFVDAMDDDLNVSAALANIFKNVKTVNVMLDQSRLDGPAAE 703

Query: 381 -LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
            +   F     +L +    +    ++   +++L+++R    K K +  AD +R+ L   G
Sbjct: 704 KIQDAFAGIDSVLQVFDFDQTPADDLLPEVKQLMEQREAARKAKDWELADRLRETLRDMG 763

Query: 440 FILEDYK 446
             + D K
Sbjct: 764 VSVTDEK 770


>gi|226320825|ref|ZP_03796378.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|226233767|gb|EEH32495.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 480

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 143/489 (29%), Positives = 225/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +    + Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKNTYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ +         L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|225548609|ref|ZP_03769656.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370639|gb|EEH00075.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 480

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 144/489 (29%), Positives = 225/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    +  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTKDFSELTNFE--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F  D  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISEFFTEAFFNDCRKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+     RV
Sbjct: 119 KVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTLPRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N ADF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DVDKFKRNKADFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDALDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA + C    +K  ++++H  FL ++  KMSKS GNFIT+ +L +   
Sbjct: 239 GVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITVKDLED--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E L++K      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESLDPVDLNTL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ +         L +      I
Sbjct: 352 NKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLRLAFIFDEI 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L      +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTRVKRG 480


>gi|221481003|gb|EEE19417.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 684

 Score =  393 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 139/474 (29%), Positives = 213/474 (44%), Gaps = 76/474 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++   Y 
Sbjct: 31  TGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YL 89

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITDIDDKII+R+               +     ++F  D T L    PT  
Sbjct: 90  NYDVTMCMNITDIDDKIIKRS------TEQGVDFLTLARHWEKEFFNDMTALNVRLPTVV 143

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQ---- 173
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +        YG      + ++    
Sbjct: 144 TRVSEYIPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVL 203

Query: 174 -KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
              G        K++P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L    D
Sbjct: 204 EGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLD 263

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI E L
Sbjct: 264 IHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECL 323

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEA--------------EILLS- 335
                    + A  IRL  LM  +   ++++   + + +A              +  L  
Sbjct: 324 SR-------FTARQIRLLCLMNRWDSFMNYSPDGETMQQAVDVDRAFDYFFALVKAKLRD 376

Query: 336 ---------KWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-- 380
                    KW     +           V  A+ ++ +T  A+ AL  L   +    +  
Sbjct: 377 ATPVSDYAQKWTSDDFALNETLRATKEQVHKAILDNFSTPEALVALQHLMSAANTYLNQK 436

Query: 381 -----LLPIFNA-------SAHILGIEVCKEHL--------NKNISIAIEKLVQ 414
                  P+             I G+    E          +   +  ++ LVQ
Sbjct: 437 TGEDVKAPLVKEVAKYIFHMLKIFGVVEDDEDNMAYVKSKGSSAAAEEVDGLVQ 490


>gi|224534810|ref|ZP_03675382.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
 gi|224514058|gb|EEF84380.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
          Length = 480

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 144/489 (29%), Positives = 227/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    + +N+++Y CGPTVYD+AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTKNFSELT--NFNNVKVYACGPTVYDYAHIGNFRTYIFGDLLIKALRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F KD  +L  + P 
Sbjct: 60  -VDYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVHEISEFFTEAFFKDCRKLNIVYPN 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +I+ +      Y +N  + FDTS   +YG  +   + ++    +RV
Sbjct: 119 KVLVASKHIPIMIEVIKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLINKDMTFSRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFIT+ +L E   
Sbjct: 239 GVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVEDLEE--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F++  L  +    E ++++      S   +D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRSQLKFSLNNLQASRIARENMINRLSYFYASLDPVDLSML 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ +         L +      +
Sbjct: 352 NKDLKNFAFSAEKEYYDSFIERVSFDLNISQGLALLWEIIKSENLGLVSKLRLAFIFDEV 411

Query: 392 LGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + KE L      +  +  +++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 ISLNLRKEILKNLENHDVVVDESMKILIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|162139903|ref|YP_716650.2| cysteinyl-tRNA synthetase [Frankia alni ACN14a]
          Length = 513

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 143/367 (38%), Positives = 199/367 (54%), Gaps = 30/367 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +Y+T  R++  F+ + P ++ +YVCGPTV    H+G+ R  + FD+L R L     
Sbjct: 1   MGLHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQSPPHVGHLRTALPFDLLRRWL--VQS 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT V+N+TDIDDKII  A ++        ++  + ++ T+ F      +  L PT Q
Sbjct: 59  EHEVTLVQNVTDIDDKIIVNADRD------GTSVWELATRQTRAFDDAYRTIGILPPTIQ 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI LI  +I  GHAY     + F   S P YG+ S ++ D          +
Sbjct: 113 PRATGHIPEMIALISALIAGGHAYAGAGSVWFRVGSFPGYGALSHQRPDSMLPSA--ESE 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVF 230

Query: 243 PHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           PHHENE AQ+ C          E+ A  W+H G L   G KMSKS GN + + + LE  +
Sbjct: 231 PHHENERAQTVCAAGGAAGAGAEEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALEAVR 290

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAV 351
                    V+R  +L  HYR  +++T + L E+     +      +      G  + A 
Sbjct: 291 -------PQVLRYHLLSAHYRSTLEYTPEALGESAAAHDRVETFVRNALDILGGPGEAAA 343

Query: 352 LSALYND 358
           L+A  +D
Sbjct: 344 LAA--DD 348



 Score = 74.1 bits (181), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 15/104 (14%)

Query: 363 SAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKE------HLNKNISI 407
            A+ A+     +           K    + +      +LG++  ++       L   +  
Sbjct: 407 RALAAIFGAVGQGNQVLSKAHSRKLAGWVDVTRRMLGVLGLDPHEQWPSAGAELRPALDG 466

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            ++  +  R      + F+ AD IR +L + G I+ED       
Sbjct: 467 VVQIALDLRSAARARRDFAEADSIRSRLAAAGLIVEDTPEGQRW 510


>gi|281425990|ref|ZP_06256903.1| cysteine--tRNA ligase [Prevotella oris F0302]
 gi|281399883|gb|EFB30714.1| cysteine--tRNA ligase [Prevotella oris F0302]
          Length = 421

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 125/423 (29%), Positives = 187/423 (44%), Gaps = 53/423 (12%)

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           DDKI ++AR E            I    T ++      L  L P+ +P AT HI +   L
Sbjct: 9   DDKIEKKARLEQLEPM------EIAQYYTNRYHAAMEALNVLPPSIEPHATGHIIEQEEL 62

Query: 136 IQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRV-PEKYHKKNPADF 191
           ++ I+ +G+AYE+N  I FD         YG  S R + +    +R       KKN  DF
Sbjct: 63  VKEILKNGYAYESNGSIYFDVEKYDKEHKYGILSGRNLTDMINNSRELQGVGEKKNQVDF 122

Query: 192 ILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
            LWK++ P     W SPW  G PGWH EC+AM   YLG  FDIHGGG+DLIFPHHE EIA
Sbjct: 123 ALWKKAQPEHIMRWPSPWSIGFPGWHCECTAMGRKYLGSHFDIHGGGMDLIFPHHECEIA 182

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG-GRSWPAPVIRL 309
           Q+  A + ++  + W+HN  + + G+KM KS GNFIT+ +          +++    IR 
Sbjct: 183 QA-VASQGDQMVHYWMHNNMITINGQKMGKSLGNFITLEQFFTGNHASLTQAYTPMTIRF 241

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----------------PAVL 352
            +L  HYR  +DF+ + L  A+    +          +                      
Sbjct: 242 FILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDLERVPVSSHCDAKTDKFVRTFRQRCY 301

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS----AHILGIEVCKE 399
            A+ +DL T   I  L +         D         L  + +A       +LG++  K 
Sbjct: 302 EAMNDDLQTPLVISYLFEACHLINTLLDHKAEICADCLKELGDAMKLFAFDLLGLKNEKG 361

Query: 400 HLN----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             N    +     ++ ++  R      K ++++D IR  L + GF ++D K+        
Sbjct: 362 DNNVAREEAYGKVVDMVLDLRAKAKADKDWTTSDKIRDALAAAGFEVKDTKD------GV 415

Query: 456 RWK 458
            WK
Sbjct: 416 TWK 418


>gi|300813895|ref|ZP_07094199.1| putative cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
 gi|300511958|gb|EFK39154.1| putative cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 836
           str. F0141]
          Length = 276

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 130/283 (45%), Positives = 168/283 (59%), Gaps = 10/283 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L  K  EF  I+   + MY CGPTVY++ H+GNARP++VFD L R   + Y   
Sbjct: 1   MKLFNSLTGKKEEFYPINSGKVTMYNCGPTVYNYIHVGNARPIVVFDTLRRY--FLYKGL 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQP 123
            V +V N TDIDDKII RA +E      N     I  K  ++F KD + L      T  P
Sbjct: 59  DVKFVLNFTDIDDKIINRANEE------NKTTEQIAEKYIEEFKKDASALGLYDYQTINP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           RAT+ + QMI  IQ +I  G AY ++ ++ FD +    YG  S +KI++ + G+RV    
Sbjct: 113 RATHVVDQMISFIQTLIDKGAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRVDVSD 172

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K+NP DF LWK     EP W++PWG GRPGWHIECS M+   LG   DIH GG DL FP
Sbjct: 173 LKRNPYDFALWKNKKENEPYWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGEDLKFP 232

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           HHENEIAQS   +     A  W+HNG + +   KMSKS GNF 
Sbjct: 233 HHENEIAQSETCNDA-PFARFWLHNGMITVNNEKMSKSKGNFF 274


>gi|219684162|ref|ZP_03539106.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672151|gb|EED29204.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 480

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 147/489 (30%), Positives = 226/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    + +N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTKDFSELA--NFANVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F KD  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISKFFTEAFFKDCRKLNVVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+    +RV
Sbjct: 119 KVLIASKHIPNMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTFSRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFIT+ +L E   
Sbjct: 239 GVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKDLEE--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F+   L  ++I     +++      S    D    
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASLDPADLNML 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNAS 388
                            + +  +  DLN    +  L ++ +           L  IF+  
Sbjct: 352 NKDLKNFGFSAEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLRLAFIFDEI 411

Query: 389 AHI-LGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             + L  E+ K+  N N  +   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKKSENHNVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKGFVLIDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|271969633|ref|YP_003343829.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|270512808|gb|ACZ91086.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 459

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 144/467 (30%), Positives = 227/467 (48%), Gaps = 30/467 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y+T  R++         ++RMY CGPTVY +AH+GN R  ++ D++ R+        
Sbjct: 2   LRLYDTRNRQVGPVLPEGARSMRMYTCGPTVYRYAHVGNFRSYVLADLIRRVSERQ--RI 59

Query: 65  CVTYVRNITDIDDKIIER-------ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
            V   RNITD+   + +         +    +         I       F+ DT  L   
Sbjct: 60  RVVACRNITDVGHLVDDAEIDPAGEDKILLQARAEGRTGLEIARFYEAAFLSDTATLNIR 119

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
            P H PRAT  I  MI +I  +I  GHAY   +  + FD +S P YG  S  ++D  K G
Sbjct: 120 PPEHSPRATETIDLMIEMIAKLIEKGHAYPTPDGSVFFDAASFPTYGEISGNRLDRLKPG 179

Query: 177 TRVP-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
            R+      K+  AD+ LWK S   E  WE+PWGRG PGWHIECSAMS  +LG+  D+H 
Sbjct: 180 HRLEGVDPRKRFHADWALWKPS-DREMTWEAPWGRGFPGWHIECSAMSLRFLGEHIDVHT 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+DL FPHHE+E AQS  A    +    W+H   L  +GRKM+KS GN + + ++++  
Sbjct: 239 GGIDLRFPHHEDERAQSD-ATAGHEVVRHWVHGEHLLFDGRKMAKSTGNVVLLQDVVDA- 296

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----QTSTSKGIIDPA- 350
                      +RLA+L   YR+ ++ T   L  A+  L +W     + S +     PA 
Sbjct: 297 -----GLDPLAVRLALLEHRYRQQMNLTWDTLRAADRTLRRWRSHVAEWSETPSRPMPAE 351

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKN-HDLLPIFNASAHILGIEV-CKEHLNKN 404
               + +A  +DL+T  A++ + +L R+ +         F     ILG+++      +++
Sbjct: 352 RVSRIEAAFDDDLDTPLALRLMRELERDDSIAPGSRFEAFLHLDQILGLDLSIDIGRSRS 411

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           +      L++ RL     + ++ +D +R +L + G  + D       
Sbjct: 412 LPPGAADLLERRLRARAARDWAVSDRLRDELATMGVQVTDTPEGQTW 458


>gi|224531997|ref|ZP_03672629.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
 gi|224511462|gb|EEF81868.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
          Length = 480

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 147/489 (30%), Positives = 227/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E    D   +++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKVYNTRTKDFSELTNFDD--VKLYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDIDDKIIE----RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     +      +    +      +  I+   T+ F KD  +L    P 
Sbjct: 60  -VNYAMNITDIGHLTGDFDDGEDKVAKTAREKGLTVYEISEFFTEAFFKDCRKLNVTYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+    +RV
Sbjct: 119 KVLIASKHIPIMIEVVKILEEKKVTYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTFSRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGLGYPSWHLECAAMNLEYFKDKLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFITIN+L E   
Sbjct: 239 GVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSLGNFITINDLEE--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGIID---- 348
              +++ +   R   L +HYR  + F++  L  ++I     +++      S   +D    
Sbjct: 295 ---QNFSSLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASLNPVDLKIL 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNAS 388
                            + +  +  DLN    +  L ++ +           L  +F+  
Sbjct: 352 DKDLKNLSSNAEKEYYDSFVEKISFDLNVPQGLALLWEIIKSENLGFVSKLKLAFVFDEI 411

Query: 389 AHI-LGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             + L  E+ K  E+ +  I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLKEEILKSLENHDVVIDDDMKTLIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|153803824|ref|ZP_01958410.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124120641|gb|EAY39384.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 248

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 124/255 (48%), Positives = 164/255 (64%), Gaps = 9/255 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +D+ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FDIHGGG DL FP
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFP 233

Query: 244 HHENEIAQSCCADRI 258
           HHENEIAQSCCA   
Sbjct: 234 HHENEIAQSCCAHDT 248


>gi|148657437|ref|YP_001277642.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148569547|gb|ABQ91692.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 401

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 140/412 (33%), Positives = 207/412 (50%), Gaps = 37/412 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++TL  +  E        + +YVCG T YD  H+G+A   ++FDVL R +R+  G  
Sbjct: 1   MWLFDTLRGQKAELLIPRDRPLTLYVCGVTPYDTTHVGHAHTFLIFDVLIRYIRHCGG-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N TD+DD + ERA ++            +  + T+QFVKD   L  + P   P+
Sbjct: 59  TVRYCQNTTDVDDPLFERAARDGIPW------DELARRETEQFVKDCRALNLIPPDFFPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG-----TRV 179
           A+  I  MI +I+ +I  GHAY  N  + +D S+ P YG+ +R    E+ +         
Sbjct: 113 ASEEIAAMIPIIERLIELGHAYVRNGNVYYDVSTEPTYGAMARVSGYEELLALANERGNN 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K +P DF+LW+RS P EP W SPWGRGRPGWHIEC+AM++ YLG   DIHGGG D
Sbjct: 173 PNDPLKDDPLDFVLWQRSRPGEPTWPSPWGRGRPGWHIECTAMATRYLGPQLDIHGGGRD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH +EI Q+          + W+H G   L+G+KMSKS GN + I + L       
Sbjct: 233 LIFPHHPSEIVQTEPYTGKRPFVHFWVHGGLAWLDGQKMSKSLGNLVFIKDAL------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDP 349
           R   A  +R  +L   YR+  ++    + +AE  + +      ++G              
Sbjct: 286 RQHSADALRWYLLSFPYRDDFEYVRSDVPQAEQKVGQLKAALAAQGDPRGERLNPEPFRQ 345

Query: 350 AVLSALYNDLNTVSAIQ-------ALHKLARESTKNHDLLPIFNASAHILGI 394
           A  +AL +DL+T  A+        A+ + A       D        A++ G 
Sbjct: 346 AYFAALDDDLDTPKALAQISVLSGAILEAASSGYDVSDAQSALRDMANVFGF 397


>gi|216263552|ref|ZP_03435547.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
 gi|215980396|gb|EEC21217.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
          Length = 480

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 145/489 (29%), Positives = 226/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT  +  +E    D  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLHNTRTKDFSELTNFD--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F KD  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVVKTAREKGLTVQEISEFFTEAFFKDCRKLNVVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+    +RV
Sbjct: 119 KVLIASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTFSRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS+GNFIT+ +L E   
Sbjct: 239 GVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSSGNFITVKDLEE--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTST------- 342
              +++     R   L +HYR  + F++  L  ++         LS +  +         
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASLDPVALGVL 351

Query: 343 ----------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNAS 388
                      +     + +  +  DLN    +  L ++ +           L  IF+  
Sbjct: 352 NKDLKNFGFSEEKEYYDSFIEKVSFDLNISQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 389 AHI-LGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             + L  E+ K  E+ +  +   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLENHDVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|163785696|ref|ZP_02180221.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879035|gb|EDP73014.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 382

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 131/396 (33%), Positives = 185/396 (46%), Gaps = 65/396 (16%)

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           KII RA++E          ++I+ +  + + +D           +PR T HIP +I LIQ
Sbjct: 1   KIINRAKKECLP------FTVISDRYIKSYFEDAENFKIEPADVEPRVTTHIPDIIDLIQ 54

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            +I  G+AYE   ++ F      +YG  S+R +DE   G RV     KK+P DF LWK S
Sbjct: 55  KLIEKGYAYEVEGDVYFSVRKFKDYGKLSKRSVDELIAGARVEPGEKKKDPLDFALWKAS 114

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
              EP W+SPWG+GRPGWH EC+AM   +LG+  DIHGGGLDL FPHHENE+AQ+     
Sbjct: 115 KAGEPAWDSPWGKGRPGWHTECTAMIFKHLGQTIDIHGGGLDLTFPHHENELAQAEALS- 173

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            +  A  WIHNG + + G+KMSKS GN+IT+ E+        + +   ++RL +L  HYR
Sbjct: 174 EKPFAKYWIHNGLVTVNGQKMSKSLGNYITLKEI-------YQKYHPDILRLLVLSVHYR 226

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------------------PAVLSALYN 357
            P+DF+  ++ E +    +         I++                         A+ N
Sbjct: 227 SPLDFSWDKMEEMKKAYERLKNAIDEYEILEKLPENPDFEEDLYGKTAKAQQDFYRAMSN 286

Query: 358 DLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA--------HILG----- 393
           D NT  A  AL+ L RE     D            L  +  +A         I G     
Sbjct: 287 DFNTPEAFAALYGLVREMNILKDKAVKEGGISKKALSSYKEAADALYSITKDIFGFFDSL 346

Query: 394 ---IEVCK----EHLNKNISIAIEKLVQERLILLKM 422
              IE+ K    +   K     I  L++ R    K 
Sbjct: 347 QPCIELPKYETIKQEEKVDEELINMLIEIRNKARKE 382


>gi|313665040|ref|YP_004046911.1| cysteine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949642|gb|ADR24238.1| cysteine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 441

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 143/464 (30%), Positives = 219/464 (47%), Gaps = 50/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++L +       ++   I +Y CGPTVY++ HIGNARP+I+ DVL R L+      
Sbjct: 1   MQLYDSLSKTKKN---LNKKTINLYCCGPTVYNYIHIGNARPVILVDVLIRYLKSR--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y++NITDIDDKII +A      +  N     I+ K T+ ++ D   L    P     
Sbjct: 56  KINYLQNITDIDDKIILKA------LDNNLTELEISQKYTKAYLNDLESLNINQPDKIIL 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            +  + +MI  I++++    AYE   ++ F+     N Y   S  K+DE   G R+    
Sbjct: 110 ISEKMNEMIKFIKDLVDIKAAYELEGDVYFNIKKYQNEYCKLSGYKLDELISGKRIEIDS 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIF 242
            K    DF LWK+ T +   W+S +G GRPGWH EC  +   Y   +  DIH GG+DL F
Sbjct: 170 KKDYSLDFSLWKK-TEIGIKWDSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q    +  E  ANIW+HNG L +   KMSKS GN I + + +       + +
Sbjct: 229 PHHENERIQFIAKNNKE-LANIWLHNGHLQINNEKMSKSLGNVILVKDFI-------KKY 280

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SKGI 346
               +R   L T+Y +P++ +   + +A     K    S                 ++  
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKNDLEIELINQSE 340

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
                 S + +DLNT   +  +  L ++  KN         + L+   +    +LG    
Sbjct: 341 YIDQFNSYMDDDLNTSLVLSLIDSLIKQINKNILDNKFENFNLLISSLSYILDVLGF--- 397

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K   N N     +KL  +   L+K K+F  AD IRK L  +G +
Sbjct: 398 KNVFNYNFKKETKKLFLKWQQLVKNKEFDKADLIRKDLIEQGIL 441


>gi|301606905|ref|XP_002933053.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 572

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 151/531 (28%), Positives = 227/531 (42%), Gaps = 98/531 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              IK+YN+L R+       DP+    Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 52  DTGIKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILLKVF 111

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V  +     IDDKII+RA++      +N +   +     Q F +D T L  L PT 
Sbjct: 112 GIDTVVVMVVTD-IDDKIIKRAKE------LNISPVALARTYEQDFKQDMTALKVLPPTV 164

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I++II +G+AY  +   + FD  SI   YG F+    D        
Sbjct: 165 YMRVTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGERYGKFN----DSFSDTASE 220

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK S P EP W SPWG+GRPGWHIECS ++S   GK  DIH GG+D
Sbjct: 221 SASQDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGID 280

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     +  +  N ++H G L+L+G   KMSKS  N++T+ E L     
Sbjct: 281 LAFPHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLRNYVTVKEFL----- 335

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
             +S+     R+  L + Y+  ++++   + +A   L                       
Sbjct: 336 --KSFSPDQFRMFCLRSKYKSAVEYSNGSMHDAVNTLHTISSFVDDAKAYMKGQLICQPV 393

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-------------- 381
                          V +A  +D +T  A+ A+  L     +                  
Sbjct: 394 QEALLWQRLNETKVNVKAAFSDDFDTPRAVDAVMDLIHHGNRQLKAVSKESNSPRSSVVY 453

Query: 382 ---LPIFNASAHILGIEVCKEH--LNKNISIAIEKLVQERLILL-KMKKFSSA------- 428
              +        ILGI + +         S  +  +V+E +    K++ ++ A       
Sbjct: 454 GAMISYIEQFLEILGISLSQNQVAAEDRHSAVLFNVVEEMISFRSKVRNYALAADESPNA 513

Query: 429 ---------------------------DYIRKQLESKGFILEDYKNPDNGQ 452
                                      D +R+ L   G  ++D  N    +
Sbjct: 514 IGQEEKQQYKERRRQLLLEREPLLQACDIMRQHLAVYGINVKDRGNTSTWE 564


>gi|111115428|ref|YP_710046.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
 gi|123341311|sp|Q0SMQ8|SYC_BORAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|110890702|gb|ABH01870.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
          Length = 480

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 145/489 (29%), Positives = 225/489 (46%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NT  +  +E    D  N+++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLHNTRTKDFSELTNFD--NVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F KD  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVVKTAREKGLTVQEISEFFTEAFFKDCRKLNVVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +++ +      Y +N  + FDTS   +YG  +   + D+    +RV
Sbjct: 119 KVLIASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMTFSRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS GNFIT+ +L E   
Sbjct: 239 GVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITVKDLEE--- 294

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------ILLSKWPQTST------- 342
              +++     R   L +HYR  + F++  L  ++         LS +  +         
Sbjct: 295 ---QNFSPLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASLDPVALGVL 351

Query: 343 ----------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNAS 388
                      +     + +  +  DLN    +  L ++ +           L  IF+  
Sbjct: 352 NKDLKNFGFSEEKEYYDSFIEKVSFDLNISQGLALLWEIIKSENLSFVSKLRLAFIFDEI 411

Query: 389 AHI-LGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
             + L  E+ K  E+ +  +   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 MSLNLREEILKNLENHDVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAKKGFVLVDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|82236042|sp|Q6DJ95|SYCM_XENTR RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|49522960|gb|AAH75287.1| albumin [Xenopus (Silurana) tropicalis]
          Length = 572

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 151/531 (28%), Positives = 227/531 (42%), Gaps = 98/531 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              IK+YN+L R+       DP+    Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 52  DTGIKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILLKVF 111

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V  +     IDDKII+RA++      +N +   +     Q F +D T L  L PT 
Sbjct: 112 GIDTVVVMVVTD-IDDKIIKRAKE------LNISPVALARTYEQDFKQDMTALKVLPPTV 164

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I++II +G+AY  +   + FD  SI   YG F+    D        
Sbjct: 165 YMRVTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGERYGKFN----DSFSDTASE 220

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK S P EP W SPWG+GRPGWHIECS ++S   GK  DIH GG+D
Sbjct: 221 SASQDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGID 280

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     +  +  N ++H G L+L+G   KMSKS  N++T+ E L     
Sbjct: 281 LAFPHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLRNYLTVKEFL----- 335

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
             +S+     R+  L + Y+  ++++   + +A   L                       
Sbjct: 336 --KSFSPDQFRMFCLRSKYKSAVEYSNGSMHDAVNTLHTISSFVDDAKAYMKGQLICQPV 393

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-------------- 381
                          V +A  +D +T  A+ A+  L     +                  
Sbjct: 394 QEALLWQRLNETKVNVKAAFSDDFDTPRAVDAVMDLIHHGNRQLKAVSKESNSPRSSVVY 453

Query: 382 ---LPIFNASAHILGIEVCKEH--LNKNISIAIEKLVQERLILL-KMKKFSSA------- 428
              +        ILGI + +         S  +  +V+E +    K++ ++ A       
Sbjct: 454 GAMISYIEQFLEILGISLSQNQVAAEDRHSAVLFNVVEEMISFRSKVRNYALAADESPNA 513

Query: 429 ---------------------------DYIRKQLESKGFILEDYKNPDNGQ 452
                                      D +R+ L   G  ++D  N    +
Sbjct: 514 IGQEEKQQYKERRRQLLLEREPLLQACDIMRQHLAVYGINVKDRGNTSTWE 564


>gi|254796714|ref|YP_003081550.1| cysteinyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254589939|gb|ACT69301.1| cysteinyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 484

 Score =  390 bits (1003), Expect = e-106,   Method: Composition-based stats.
 Identities = 147/320 (45%), Positives = 191/320 (59%), Gaps = 16/320 (5%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCGPTVYD  HIGN R  IV+D++YR+L   + E  V YVRNITD+DDKII  A  + 
Sbjct: 1   MYVCGPTVYDVPHIGNIRASIVYDIVYRVLLKLFPE--VVYVRNITDVDDKIITSASAQG 58

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                      I  +  + F +    L CL+PT +P+AT  I +MI +IQ +I  G+AY 
Sbjct: 59  VR------CDEIALRYERIFHEHLDLLNCLSPTVEPKATQSIGRMISMIQALIDRGNAYS 112

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
               + FD  S   YG  S+RK ++   G RV E  +KK+P DF+LWK  +     W SP
Sbjct: 113 VAGNVYFDVGSFAEYGVLSKRKKEQLVYGVRVEEDVNKKHPGDFVLWK--SDDHVYWPSP 170

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+   LG  FDIHGGG DL FPHHENE AQS CA+   K A  WIH
Sbjct: 171 WGKGRPGWHIECSAMTLATLGADFDIHGGGADLKFPHHENERAQSMCANPGSKFARYWIH 230

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NGFL ++G KMSKS GN + ++ L+E+           VIR  ++ THY +P+D+    +
Sbjct: 231 NGFLTVKGEKMSKSLGNVVNVDTLVES------GVTPNVIRFVLISTHYSKPLDWNDAMV 284

Query: 328 TEAEILLSKWPQTSTSKGII 347
            EA   L K+       G++
Sbjct: 285 GEAVNSLMKFKLALLDSGVL 304



 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 52/131 (39%), Gaps = 10/131 (7%)

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE-----S 375
           +F+ +     + +  K+        I        + +D NT  AI  LH L+ +     +
Sbjct: 350 NFSQKI----KEIFDKFESFGDDCSIYTREFFECMADDFNTPGAIAVLHGLSDKVRLIGT 405

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
           +K ++L  +       LGI++     +      I   +Q R    + K F  AD IR  L
Sbjct: 406 SKVNNLAYLLYNLLIFLGIDLGVRQ-SSVSEDFIRSQLQRRADCKRQKNFVEADEIRSVL 464

Query: 436 ESKGFILEDYK 446
              G ++ D++
Sbjct: 465 AQMGVLIRDHR 475


>gi|158300888|ref|XP_001238361.2| AGAP011821-PA [Anopheles gambiae str. PEST]
 gi|157013377|gb|EAU75859.2| AGAP011821-PA [Anopheles gambiae str. PEST]
          Length = 525

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 166/522 (31%), Positives = 248/522 (47%), Gaps = 91/522 (17%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           +   +++Y+   ++    Q I PS   +  Y CGPTVYD AHIG+A   +  D+L R+LR
Sbjct: 16  LTHDLRLYDGRLKEKVALQ-IHPSKSYLSFYTCGPTVYDSAHIGHASCYVRLDILQRILR 74

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +++    VT   NITDIDDKII RA ++            +  +   +F  D  RL   A
Sbjct: 75  HHFHLPLVT-AMNITDIDDKIIARALEQQVDW------QQLARRYEDEFWSDLQRLNVCA 127

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
           P  + R T+HIP +I  +Q ++  G AY  A+  + F+T+    YG   +  I+ +   +
Sbjct: 128 PDVKLRVTDHIPAIIRFVQTLVEKGFAYSTADGSVYFETAKYERYGKLQKVIIEPESNAS 187

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               K  K++ +DF LWK S P EP W +P +  GRPGWHIECS ++SH  G+  D H G
Sbjct: 188 ----KGQKRHQSDFALWKASKPGEPFWTAPGFSHGRPGWHIECSTLASHLFGRTIDFHAG 243

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLET 294
           GLDL FPHHENE  QSCC   +      W+H G L+LEG+  KMSKS  N ++I ELL  
Sbjct: 244 GLDLRFPHHENEETQSCCYHDVPDWVTHWLHTGQLHLEGQTHKMSKSLKNTVSIGELLG- 302

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIID---PA 350
                 ++ A   R+  L++HYR  I++  + +  A  +L K+    S +K  ID   PA
Sbjct: 303 ------AYSADEFRMLCLLSHYRSAIEYGPEAMGTARNVLRKFASFFSDAKAYIDGLKPA 356

Query: 351 VLSA--------------------LYNDLNTVSAIQALHKLARE----------STKNHD 380
              A                    L ND NT +++ AL +LA            ST    
Sbjct: 357 AYDATSTESLLGKLSNTRTTVREFLKNDFNTANSVLALGELASNVQRIINSHEPSTSGVS 416

Query: 381 LLPIFNASAHILGI-EVCKEHL-----------------------NKNISIAIEKLV--- 413
           L+   N    +L + E  +E L                       N+++   IE +V   
Sbjct: 417 LIGSSN-VGAVLAVTEYIREELVSYGVQSLDKQSPQHSRQMGNDANQSLEQLIEAMVATR 475

Query: 414 -QERLILLKMKK---FSSADYIRKQLESKGFILEDYKNPDNG 451
            + RL  ++ K    F   D +R +L+     ++D+    + 
Sbjct: 476 SEIRLQAIETKNPQLFKVCDLLRDRLKLANVEVKDHGKTSSW 517


>gi|156082812|ref|XP_001608890.1| cysteinyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154796140|gb|EDO05322.1| cysteinyl-tRNA synthetase, putative [Babesia bovis]
          Length = 662

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 151/524 (28%), Positives = 222/524 (42%), Gaps = 90/524 (17%)

Query: 2   KKKIKIYNTLER-KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +  + + N+L      EF   +   I  Y CGPTVYD AH+G+AR  +  D +  +L  Y
Sbjct: 56  RTGLLLRNSLAGDAKVEFVPENGRRINWYCCGPTVYDTAHLGHARTYVACDTIRSILERY 115

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    V  V N+TDIDDKII+RA  E          + + S+   +F +D   L    P 
Sbjct: 116 F-NYDVHLVINVTDIDDKIIQRANDE------GCKFNELASRWEHEFWEDMAALGVDPPN 168

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-------- 172
              R +  +P++I  I+ I+ +G+AYEA+  + FD  +          K++         
Sbjct: 169 VITRVSEFLPEIISYIETIMKNGYAYEADGSVYFDIDAFIGSDKHVYAKLEPNSYNDLCR 228

Query: 173 --QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK- 229
                GT      HKK+P DF LWK++ P EP W SPWG GRPGWHIECSAM S+  GK 
Sbjct: 229 ITDGEGTLGEVSTHKKSPRDFALWKKAKPGEPFWSSPWGEGRPGWHIECSAMCSNVFGKD 288

Query: 230 -VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
            + DIH GG+DL FPHH+NEIAQS       +  N ++H G L+++G KMSKS  NFI+I
Sbjct: 289 TIIDIHSGGIDLKFPHHDNEIAQSEAFSDRNQWVNYFLHFGHLHIQGLKMSKSLKNFISI 348

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ--RLTEA--------------EI 332
            +LL         +    IR+  L + +   +++  +   + EA                
Sbjct: 349 KQLLN-------KYNKRQIRILFLTSRHDGTLNYNPEPQGMAEAIAIDETFFNFFSLLNS 401

Query: 333 LLSKWPQT----------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL- 381
            L K              +T    +   V  A  ++ +T   +Q++              
Sbjct: 402 RLDKRENAQKLGEDDVRLNTEFERLRDTVHGAFLDNFDTPKVLQSMCAFISTLNAYLSTP 461

Query: 382 ---------LPIFNASAHILGIEVCKE----------HLNKNISIAIEKLVQERLILL-- 420
                    L I      IL I   KE            +      +E L+  R      
Sbjct: 462 QSYLRQALGLSIKKYMYKILEILKLKEPGTEYGQDENQESSVSGPLLEHLLNFRAKTRLF 521

Query: 421 -----KMKK---------FSSADYIRKQ-LESKGFILEDYKNPD 449
                K K+             D +R + L   G +LED    +
Sbjct: 522 AQHCMKTKEVDVGKTADLLKLCDLVRDEQLPELGILLEDRDGGE 565


>gi|326436975|gb|EGD82545.1| cysteinyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 528

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 146/532 (27%), Positives = 222/532 (41%), Gaps = 95/532 (17%)

Query: 5   IKIYNTLERKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++++N L R++         +   +  Y CGPTVYD +HIG+A     FD+L R++  ++
Sbjct: 16  LRVFNGLTRQLETVNPAGVNERGWLTWYQCGPTVYDHSHIGHAVCFQRFDILRRVMERHF 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V  V  +TDIDDKII +A  E            I  +  + F +D   L  L P H
Sbjct: 76  G-MHVLQVWGMTDIDDKIIRKAHTEQRHW------QDIARQYEESFFQDMAALNILPPAH 128

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI--PNYGSF----------SRRK 169
             R T HI ++I  IQ I+  GHAY   + + FD  +     YG            S R 
Sbjct: 129 ITRVTEHIDEIIEFIQGILDRGHAYVTPSGVYFDLQAFGEDKYGRLGKGVQSTAAASTRA 188

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
             +        +  HK++ ADF LWKR    +P W++P+G+GRPGWHIECSAM+S YLG+
Sbjct: 189 DADAGAAADSNDAAHKRHRADFALWKRGDAGDPTWDAPFGKGRPGWHIECSAMASKYLGQ 248

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+DL++PHH NE+AQ             + H G L     KMSKS GN I I 
Sbjct: 249 HIDIHTGGIDLLYPHHTNELAQCESHYGHCDWVRHFWHTGHLTTRSEKMSKSLGNTIAIK 308

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--- 346
           + L++            +R+  L + YR  I F+   +T A  LL +      +      
Sbjct: 309 DFLQSHTHND-------LRMLCLQSRYRSDIAFSDSDVTAASRLLQRLSSFVANMDATTP 361

Query: 347 ----------IDPAVLSALY--------------NDLNTVSAIQALHKLAREST---KNH 379
                       PA +  +               +D NT  A++ ++++   +     N 
Sbjct: 362 FAPPQTQSLRPSPACVELMETMCTSAAALDAALCDDFNTPQALKIVNQVVTSTNHAAANS 421

Query: 380 DLL--------PIFNASAHILGIEV-----------CKEHLNKNISIAIEKLVQERLILL 420
           D+                 + G+ +                    +  I+  V+ R    
Sbjct: 422 DVALGVLSHAGRWVRGVLEMFGLTLPSPSGSSSSSSTTTTDGSRAAGVIDACVELRSTAR 481

Query: 421 -----------KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
                      K +  ++ D  R QL S G  + D +   +      W+ KP
Sbjct: 482 EIALSSGDADVKGRLLAACDATRDQLGSHGVEVRDARTGPS------WRWKP 527


>gi|195485861|ref|XP_002091264.1| GE12334 [Drosophila yakuba]
 gi|194177365|gb|EDW90976.1| GE12334 [Drosophila yakuba]
          Length = 560

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 147/515 (28%), Positives = 226/515 (43%), Gaps = 84/515 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYN   R+       +P  +  Y CGPTVYD AH+G+A   +  D+L R+LR Y+ 
Sbjct: 46  TGINIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFK 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITD+DDKII+RA+                     +F +D +RL       +
Sbjct: 106 INLVT-AMNITDVDDKIIKRAQLAGLDWQKM------ARAYEAEFRQDMSRLNVQPADVR 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              T  +P +I  IQ +I    AY   +N + FD S   NYG      + ++K+      
Sbjct: 159 SHVTTTMPVIIQFIQQLIDQKQAYVTPDNSVYFDVSKSQNYGKLENLGLSKEKL----ER 214

Query: 182 KYHKKNPADFILWKRSTPM-EPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK      EP WE+PWG  GRPGWHIECSA++  + G+  D H GGLD
Sbjct: 215 GSIKRNSADFALWKARKSGSEPTWEAPWGGEGRPGWHIECSAIAGLFFGRQLDFHAGGLD 274

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + ++  N W+H G L++  + +KMSKS GN I+++ELL     
Sbjct: 275 LRFPHHENEEAQCCARYKTDQWVNYWLHTGQLHMVGDAQKMSKSLGNTISVSELL----- 329

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
             + + A   R+A L+++YR  + ++ Q +  A   L ++                    
Sbjct: 330 --KKYTADEFRMACLLSNYRNAMPYSDQLMVTARQTLQRFKNFQADLSAYTQFLKPVHLL 387

Query: 350 --------------AVLSALYNDLNTVSAIQALHKLARESTKNHD--------------- 380
                            + L +D +T  AI  L       ++  +               
Sbjct: 388 DEGALKAQLTYTVTEFDNCLRDDFDTARAISVLMDQMSSISRCINEQQVDAQEEPAYCID 447

Query: 381 -LLPIFNASAHI---LGI------EVCKEHLNK-----NISIAIEKLVQERLILLKM--- 422
            LL   N    +    G+      E  +E ++      + S+ +  ++  R  + +    
Sbjct: 448 LLLAAGNFINRVIVTFGLTEFQDREPLQEKVSFSDHGIDPSLLVNDVINVRGRMRERAIS 507

Query: 423 ---KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
              K     ++ D +R  L+  G  + D+K   + 
Sbjct: 508 GDVKNQQLLAACDELRSLLQQHGIQVRDHKQGSSW 542


>gi|51598852|ref|YP_073040.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
 gi|61216166|sp|Q660S3|SYC_BORGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|51573423|gb|AAU07448.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 480

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 145/489 (29%), Positives = 223/489 (45%), Gaps = 50/489 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  +  +E        +++Y CGPTVY++AHIGN R  I  D+L + LR+   + 
Sbjct: 3   LKLYNTRTKDFSELANFSD--VKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGYK- 59

Query: 65  CVTYVRNITDID----DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     D      +    +      +  I+   T+ F KD  +L  + P 
Sbjct: 60  -VNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVYEISKFFTEAFFKDCKKLNVVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-DEQKMGTRV 179
               A+ HIP MI +I+ +      Y +N  + FDTS   +YG  +   + D+    +RV
Sbjct: 119 KVLIASKHIPNMIEVIKILEEKKFTYFSNGNVYFDTSCFKSYGEMAGIDLIDKDMAFSRV 178

Query: 180 PEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                K+N  DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH G
Sbjct: 179 DIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFKDTLDIHLG 238

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D I  HH NEIA   C    +K  +I++H  FL ++  KMSKS+GNFIT+      K 
Sbjct: 239 GVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSHGNFITV------KG 291

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGIID---- 348
              +++     R   L +HYR  + F+   L  ++I     +++      S    D    
Sbjct: 292 LEEQNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASLDPADLNML 351

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHI 391
                            + +  +  DLN    +  L ++ + E+      L +      I
Sbjct: 352 NKDLKNFGFSIEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLKLAFIFDEI 411

Query: 392 LGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + + + +E L K+      I   ++ L++ER I    K F  AD IR     KGF+L D 
Sbjct: 412 ISLNLREEILKKSENHNIVIDENMKILLEERRIAKCEKNFKRADEIRDFFAKKGFVLIDT 471

Query: 446 KNPDNGQRM 454
           K     +R 
Sbjct: 472 KEGTKVKRG 480


>gi|159900776|ref|YP_001547023.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
 gi|159893815|gb|ABX06895.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
          Length = 396

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 132/407 (32%), Positives = 202/407 (49%), Gaps = 33/407 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +Y+TL +     + ID   +RMYVCG T YD  H+G+AR  +V+D + R L +     
Sbjct: 1   MLLYDTLCQTPVAMEPID-GFVRMYVCGVTPYDTTHMGHARTYVVYDTIRRYLEWQGL-- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TDIDD I+ ++ Q      +      +  + T++F++D   L    P H  +
Sbjct: 58  PVLYVQNVTDIDDDILRKSAQ------LGLTWDELGRQETERFLRDMDALNVRMPNHYVK 111

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVP 180
           AT+ I ++I +   +I  G AYE    + F+  + P++GS +                 P
Sbjct: 112 ATDAIAKIIEVNSGLIERGVAYENQGNVYFNVHADPDFGSLAHSDYASMLAIANERGNFP 171

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +  HK++P DF+LW+ + P EP W+SPWGRGRPGWHIEC+AM   YLG   +IHGGG DL
Sbjct: 172 DDPHKRDPLDFVLWQATKPGEPWWDSPWGRGRPGWHIECTAMVLEYLGPQINIHGGGSDL 231

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHH  E+AQ+            W H G +  EG KMSKS GN +  ++ L       +
Sbjct: 232 QFPHHACELAQAENFTGQSPHVAAWSHIGMVYYEGEKMSKSLGNLVLASKTL-------Q 284

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDPAVL 352
            + A  IRL +L  +YR+  +++   +   E  + ++ Q   S           +    +
Sbjct: 285 HYSADAIRLGLLKYYYRDQFEYSNDDVAWGERTVERFKQAVNSGVSGGALHAEELRNEAI 344

Query: 353 SALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILGI 394
           +AL  D  T + +QAL  LA      E                +LG+
Sbjct: 345 AALDADFQTPACLQALITLAEASINGEIDDAELAATTLRELGAVLGL 391


>gi|147901608|ref|NP_001083370.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor
           [Xenopus laevis]
 gi|82237606|sp|Q6PA41|SYCM_XENLA RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|38014676|gb|AAH60463.1| MGC68641 protein [Xenopus laevis]
          Length = 572

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 155/531 (29%), Positives = 229/531 (43%), Gaps = 98/531 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              IK+YN+L RK       DP+    Y CGPTVYD AH+G+A   + FD + R+L   +
Sbjct: 52  DTGIKVYNSLTRKKEPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDTIRRILLKVF 111

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +     +TDIDDKII+RA++      +N +   +     Q F +D T L  L PT 
Sbjct: 112 G-IDIVMAMVVTDIDDKIIKRAKE------LNISPVALARTYEQDFKQDMTALRVLPPTV 164

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T  IPQ+I  IQ II +GHAY  +   + FD  SI + YG F+    D        
Sbjct: 165 YMRVTESIPQIISFIQQIIANGHAYSTSQGNVYFDVQSIGDQYGKFNDSFCDAASESALQ 224

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK S P EP W SPWG+GRPGWHIECS ++S   GK  DIH GG+D
Sbjct: 225 D----KRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGID 280

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQ     +  +  N ++H G L+L+G   KMSKS  N++TI E L     
Sbjct: 281 LAFPHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLKNYVTIKEFL----- 335

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
             +S+    +R+  L + Y+  ++++ + + +A   L                       
Sbjct: 336 --KSFSPDHLRMFCLRSKYKSAVEYSKESMHDAVNTLHLISSFVDDAKAYLKGQLICQPV 393

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------- 384
                          V +A  +D +T  A+ A+  L     +    +             
Sbjct: 394 QETLLWQRLNETKVNVKAAFSDDFDTPRAVDAVLDLIHHGNRQLKAVSKESSSPRSPIVY 453

Query: 385 ------FNASAHILGIEVCKEH--LNKNISIAIEKLVQERLILL-KMKKFSSA------- 428
                       I+GI + +      +  S  +  +V+E +    K++ +S A       
Sbjct: 454 GAMVSYIEQFLEIMGISLGQNQVPAEERHSAMLFNVVEEMVSFRSKVRNYSLATNESATA 513

Query: 429 ---------------------------DYIRKQLESKGFILEDYKNPDNGQ 452
                                      D  R+ L   G  ++D  +    +
Sbjct: 514 IGQEEKQQYKERRRQLLLEREPLLQACDIARQHLAVYGINVKDRGDTSTWE 564


>gi|145492154|ref|XP_001432075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124399184|emb|CAK64678.1| unnamed protein product [Paramecium tetraurelia]
          Length = 672

 Score =  388 bits (997), Expect = e-105,   Method: Composition-based stats.
 Identities = 148/558 (26%), Positives = 231/558 (41%), Gaps = 121/558 (21%)

Query: 3   KKIKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNAR---------PMIVFDV 52
             +K+ N+L+   +  F  I+   +  Y CGPTVY  +H+G+AR           +  DV
Sbjct: 23  TGLKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARQCYCNYVFRTYLGIDV 82

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           + R LR Y+    ++ V NITDIDDKII  A+        N      T    + F     
Sbjct: 83  IRRTLRDYFNYDLLS-VMNITDIDDKIINGAKS------ANQDFLEFTKVWEKDFFSAME 135

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSF-- 165
            L    P    R ++++P+++  I+ II +G+AY++N  + FD           Y     
Sbjct: 136 ALNIELPDVITRVSDYVPEIVTFIEKIIANGYAYDSNGSVYFDYFQFQIKLQHTYPKMRP 195

Query: 166 -SRRKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
            +   + ++  G     K   KK+P DF LWK S P EP W SPWG GRPGWHIECS M+
Sbjct: 196 ETNADLLQEGEGESQANKQSEKKSPNDFALWKASKPEEPKWPSPWGEGRPGWHIECSVMA 255

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           S  LG   D+H GG+DLIFPHH+N +AQ+      ++  N +IH G LN+  RKMSKS  
Sbjct: 256 SAILGNPIDLHAGGIDLIFPHHDNSLAQAEACFNCDQWINYFIHLGHLNIADRKMSKSLK 315

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA------------- 330
           NF+TI+E+L       + +    IRL   +  Y   ++++ +++ +A             
Sbjct: 316 NFLTIDEVL-------KRYTPRQIRLNFAIHQYDAVMNYSEEQVEQAISKDKAYQEFFQN 368

Query: 331 -EILLS--------KWPQTSTSKGII----DPAVLSALYNDLNTVSAIQALHKLAREST- 376
            +I L         KW Q       +       + +AL  + +  + I A+ KL  +   
Sbjct: 369 TKIYLRESQVTGPQKWTQNDFQISNLLRNTKQVIHAALLKNFDFPTVIDAIDKLINQVNV 428

Query: 377 -------KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE--------RLILLK 421
                  +   +  +      ILG+         + S  I+ ++ E        +L   K
Sbjct: 429 QIAGKTVRAPLVSSVVQYVNFILGLIGLNYQAQNSNSSDIKSIMAEVCSIRDQVKLAARK 488

Query: 422 -----------------MKK----------------------------FSSADYIRK-QL 435
                             K                             F   D +R  +L
Sbjct: 489 GEFEAISNIVSQKQFQYEKNLSNGIVDCINQFQQLVLAASQEKNKQQLFQLCDRLRDEEL 548

Query: 436 ESKGFILEDYKNPDNGQR 453
              G  +ED +     ++
Sbjct: 549 FELGIKIEDKEQASIWKQ 566


>gi|83319731|ref|YP_424102.1| cysteinyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|109894910|sp|Q2ST11|SYC_MYCCT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|83283617|gb|ABC01549.1| cysteinyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 441

 Score =  388 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 141/464 (30%), Positives = 221/464 (47%), Gaps = 50/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++L +       ++   I +Y CGPTVY++ HIGNARP+I+ DVL R L+      
Sbjct: 1   MQLYDSLSKTKKN---LNKKTINLYCCGPTVYNYIHIGNARPVILVDVLTRYLKSR--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + Y++NITDIDDKII +A      +  N     I+ K T+ +++D   L    P     
Sbjct: 56  KINYLQNITDIDDKIILKA------LDNNLTELEISQKYTKAYLEDLESLNINQPDKIIL 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            +  + +M+  I++++    AYE + ++ FD     N Y   S  K+DE   G R+    
Sbjct: 110 ISEKMNEMVKFIKDLVDIKAAYELDGDVYFDIKKYQNEYCKLSGYKLDELISGKRIEIDS 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIF 242
            KK   DF LWK+ T +   W+S +G GRPGWH EC  +   Y   +  DIH GG+DL F
Sbjct: 170 KKKYSLDFSLWKK-TQIGIKWDSFFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q    +  E  A+IW+HNG L +   KMSKS GN I + + +       +  
Sbjct: 229 PHHENERIQFIAKNNKE-LADIWLHNGHLQINDEKMSKSLGNVILVKDFI-------KKH 280

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SKGI 346
               +R   L T+Y +P++ +   + +A     K    S                  +  
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKNDLKISLIKQSK 340

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
                 + + +DLNT   +  +  L ++  KN         + L+   +    +LG    
Sbjct: 341 YIDQFNNYMDDDLNTSLVLSLIDSLIKQINKNILDNISDNFNLLISSLSYILDVLGF--- 397

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           K+  N      I++L  +   L+K K+F  AD IRK L  +G +
Sbjct: 398 KDVFNYKFKKEIKELFLKWQQLVKDKEFDKADLIRKDLIEQGIL 441


>gi|187918460|ref|YP_001884023.1| cysteinyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|229558618|sp|B2S0U7|SYC_BORHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|119861308|gb|AAX17103.1| cysteinyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 481

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 142/490 (28%), Positives = 217/490 (44%), Gaps = 51/490 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  + +++ +    + +  Y CGPTVY++AHIGN R  I  D+L + LR    + 
Sbjct: 3   LKLYNTKTKSLSDIKNFSDTKV--YACGPTVYNYAHIGNLRTYIFEDLLIKSLRLL--KY 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     +    E   +         +  I+   T+ F  D  +L  + P 
Sbjct: 59  NVNYAMNITDIGHLTGDFDEGEDKVVKAARERGLTVYEISRFFTEAFFDDCAKLNIVYPD 118

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--R 178
               A+ +I  MI +++ +  +G  Y  N  + FDTS    YG  +   ++     +  R
Sbjct: 119 KVLVASEYIASMIEVVKVLEQNGFTYFVNGNVYFDTSRFNGYGQMAGINLNNFGRSSVSR 178

Query: 179 VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     KKN +DF+LW    +    E  W+SPWG G P WH+EC+AM+  Y     DIH 
Sbjct: 179 VEIDLSKKNKSDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLDYFKSTLDIHL 238

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D +  HH NEIA + C    +   ++++H  FL +E  KMSKSN NFITI +L    
Sbjct: 239 GGVDHVGVHHINEIAIAECYLN-KMWCDMFVHGEFLIMEDEKMSKSNNNFITIKDL---- 293

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGIIDPA- 350
                 +     R   L  HYR  + FT   L   +I     L+K     +S    D A 
Sbjct: 294 --ESDGFSPLDFRYFCLTAHYRTQLKFTFSNLRACKIARENMLNKLTFFYSSLSQFDMAL 351

Query: 351 -------------------VLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAH 390
                               L  +  DL+   A+  L  + + +       L +      
Sbjct: 352 LNKNCENIESVSENKYYNNFLEKIAFDLSIPQALALLWDIVKDDDLSALLKLLLAFKFDE 411

Query: 391 ILGIEVCKEHLNK------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L + + +  L +      NI   +  L++ER +    K F  AD IR+   SKGF+L D
Sbjct: 412 VLSLGLKEGVLREIERDRVNIDDTMHSLIEERRLAKLRKDFKRADEIREYFRSKGFVLID 471

Query: 445 YKNPDNGQRM 454
            +     +R 
Sbjct: 472 TEEGTKVKRG 481


>gi|301117980|ref|XP_002906718.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108067|gb|EEY66119.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 688

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 143/442 (32%), Positives = 210/442 (47%), Gaps = 76/442 (17%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++YN++ R  T F  +    +  Y+CGPTVYD  H+G+ R    FD + R+L  Y+G 
Sbjct: 34  PLRLYNSMTRSKTAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILEDYFGL 93

Query: 64  KCVTYVRNITDIDDKIIERA-----------------RQEHPSIPINDA----------- 95
           + V  V NITDIDDKII RA                 + E   + +  A           
Sbjct: 94  E-VELVMNITDIDDKIILRASETGWLEANPGKELPKDKDEKAKLVMEWASQQSAEDNMRR 152

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              ++    + F++D   L    PT   R + ++P+++  ++ II +G AYE+N  + FD
Sbjct: 153 TRELSKFWEKSFLEDMAALNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAYESNGSVYFD 212

Query: 156 TSSIPN-----YGSF-----SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           T++        YG        + ++  +  G     +  K+N +DF LWK+S   EP W 
Sbjct: 213 TAAFGQSKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFWP 272

Query: 206 SPWGRGRPGWHIECSAMSSHYL----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           SPWG GRPGWHIECSAM+S  L    G   D+H GG+DL FPHH+NEIAQS       + 
Sbjct: 273 SPWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQW 332

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G LN+EG KMSKS  NF+ I E L              +R   L+  Y  P+D
Sbjct: 333 VNYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDN-------SPRQLRFLFLLHKYNVPMD 385

Query: 322 FTVQRLTEA--------------EILLSKWPQTSTSK----------GIID--PAVLSAL 355
           +    + EA              +  L +     T K           ++D    V  AL
Sbjct: 386 YNDNSMDEAVGVDRFFTEFFANVKARLRELGVEKTQKWTPVEKALHGALLDCKEKVFRAL 445

Query: 356 YNDLNTVSAIQALHKLARESTK 377
            +D+NT  A+  L +LA+E  +
Sbjct: 446 SDDINTPLALLHLQQLAKEVNR 467


>gi|194883178|ref|XP_001975680.1| GG22443 [Drosophila erecta]
 gi|190658867|gb|EDV56080.1| GG22443 [Drosophila erecta]
          Length = 560

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 149/515 (28%), Positives = 225/515 (43%), Gaps = 84/515 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYN   R+       +P     Y CGPTVYD AH+G+A   +  D+L R+LR Y+ 
Sbjct: 46  TGINIYNHGLRQKVPLILRNPQMATWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFK 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITD+DDKII+RA+                     +F +D  RL       +
Sbjct: 106 INLVT-AMNITDVDDKIIKRAQLAGLDWQKM------ARAYEAEFRQDMLRLNVQPADVR 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              T  +P +I  IQ +I    AY   +N + FD S   NYG      + E+K+      
Sbjct: 159 SHVTTTMPVIIQFIQQLIDEKQAYVTPDNSVYFDVSKSQNYGKLQNIGLSEEKL----ER 214

Query: 182 KYHKKNPADFILWKRSTP-MEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK      EP W +PWG  GRPGWHIECSA++  + G+  D H GGLD
Sbjct: 215 GSIKRNSADFALWKARKSSGEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDFHAGGLD 274

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + E+  N W+H G L++  + +KMSKS GN I+++ELL     
Sbjct: 275 LRFPHHENEEAQCCARYKTEQWVNYWLHTGQLHMVGDHQKMSKSLGNTISVSELL----- 329

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------II 347
             + + A   R+A L+++YR  + ++ Q +  A   L ++                  ++
Sbjct: 330 --KKYTADEFRMACLLSNYRNAMPYSDQLMLTARQTLQRFKNFQADLSAYTQFLKPIHLL 387

Query: 348 DPAVLSA------------LYNDLNTVSAIQALHKLARESTKNHD--------------- 380
           D   L A            L +D +T  AI  L       ++  +               
Sbjct: 388 DEGALKAQLTHTVTELDNCLRDDFDTARAISVLMDQMSSISRCINEQQVDAQEEPAYCID 447

Query: 381 -LLPIFNASAHI---LGIEVCKEHLNK-----------NISIAIEKLVQERLILLKM--- 422
            LL   N    +    G+   ++  +            + S+ +  ++  R  + +    
Sbjct: 448 LLLAAGNFINRVIVTFGLSELQDRESSQEKVSFSDHGIDPSLLVNDVINVRGRMRESATS 507

Query: 423 ---KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
              K     ++ D +R  L+  G  + D+K   + 
Sbjct: 508 GDVKNQQLLAACDELRNLLQQHGIQVRDHKQGSSW 542


>gi|222478729|ref|YP_002564966.1| cysteinyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451631|gb|ACM55896.1| cysteinyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 497

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 145/509 (28%), Positives = 218/509 (42%), Gaps = 77/509 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + +TL  +  EF      ++ +YVCG TV D  H+G+AR     DVL+R L +   
Sbjct: 1   MSLVVTDTLADERVEFT--ADGDVTLYVCGLTVSDDPHLGHARLWFHADVLHRWLDHVGY 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N+TD+++KI  R  +        D    +    T         L  L     
Sbjct: 59  D--VRHVENVTDVNEKITARIGERDAWTDERD----VAETFTATTFDAMRGLNLLRAEVY 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T H+P+++ L++ +I  G+AYE+N  + FD ++  +YG  S + + + +      E+
Sbjct: 113 PRVTEHVPEIVDLVETLIEKGYAYESNGSVYFDVTAFDDYGKLSNQNVQDLEAQGEPDER 172

Query: 183 YHKKNPADFILWKRS------------------TPMEPGWESPWGRGRPGWHIECSAMSS 224
             K+NP+DF LWK                    TP    W SPW  GRPGWH+ECSAMS+
Sbjct: 173 SEKRNPSDFALWKADGVSETAAREHAKHDHGDETPSGEIWNSPWSEGRPGWHVECSAMST 232

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +LG   DIH GG DL+FPHHENEIAQS  A   E  A  W+H G L +EG KMS S GN
Sbjct: 233 THLGDTLDIHMGGRDLVFPHHENEIAQSEAATG-ETFARHWLHVGLLAMEGEKMSSSIGN 291

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREP-----------------IDFTVQRL 327
           F T+ + L+            VIR       YR                   +  T  R 
Sbjct: 292 FWTVPDALDELGV-------NVIRTFYAGAAYRSEQALTEETIAEAEERWERLSRTYDRA 344

Query: 328 TEAEILLSKWPQTSTSK--GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHD-- 380
            EA        +    +  G ++ A   + +A+ +DLN   A  AL  L     ++ D  
Sbjct: 345 VEALDSTEARAKAEDEELRGAVETARDDLATAMNDDLNLREATAALLDLTDAVNRHVDDV 404

Query: 381 -----------------LLPIFNASAHILGIEVCKEHLNKNI--SIAIEKLVQERLILLK 421
                            +    N +  +LG++               ++ ++  R    +
Sbjct: 405 EDGDTESAYDYRGLREAVEAFENLAGDVLGLQFESTTDGDVDLAGELVDLVLDVREAERE 464

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDN 450
              +  AD +R  L   G  +ED  +   
Sbjct: 465 AGNYERADELRDALREVGVEIEDGPDGAT 493


>gi|19922218|ref|NP_610930.1| CG8257 [Drosophila melanogaster]
 gi|7303228|gb|AAF58291.1| CG8257 [Drosophila melanogaster]
 gi|16183283|gb|AAL13681.1| GH24360p [Drosophila melanogaster]
 gi|220945642|gb|ACL85364.1| CG8257-PA [synthetic construct]
 gi|220955498|gb|ACL90292.1| CG8257-PA [synthetic construct]
          Length = 558

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 149/515 (28%), Positives = 225/515 (43%), Gaps = 86/515 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYN   R+       +P  +  Y CGPTVYD AH+G+A   +  D+L R+LR Y+ 
Sbjct: 46  TGINIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFK 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITD+DDKII+RA+                     +F +D  RL   AP  +
Sbjct: 106 INLVT-AMNITDVDDKIIKRAQLAGLDWQKM------ARAYEAEFRQDMLRLNVQAPDVR 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              T  +P +I  IQ +I    AY   +N + FD S   NYG      + E K+      
Sbjct: 159 SHVTTTMPVIIQFIQQLIDGKQAYVTPDNSVYFDVSKSKNYGKLQNLGLSEDKL------ 212

Query: 182 KYHKKNPADFILWKRSTPM-EPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK      EP W +PWG  GRPGWHIECSA++  + G+  DIH GGLD
Sbjct: 213 DPIKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDIHAGGLD 272

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + ++  N W+H G L++  +  KMSKS GN I+++ELL     
Sbjct: 273 LRFPHHENEEAQCCARYKTDQWVNYWVHTGQLHMVGDREKMSKSLGNTISVSELL----- 327

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
             + + A   R+A L+++YR  + ++ Q +  A   L ++                    
Sbjct: 328 --KKYTADEFRMACLLSNYRNAMPYSDQLMVTARQTLQRFRNFQADLSAYTQFLKPVHLL 385

Query: 350 --------------AVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLP 383
                            + L +D +T  AI  L       ++  +             + 
Sbjct: 386 DEGALKAQLTHTVTEFDNCLRDDFDTARAISVLIDQMSSISRCINEQQVDAQEEPAYCID 445

Query: 384 IFNASAHI-------LGI--EVCKEHLNKNIS---------IAIEKLVQERLILLKM--- 422
           +  A+ +         G+     KE L + +S         + +  ++  R  + +    
Sbjct: 446 LLLAAGNFINRAIVTFGLSELQDKESLQEKVSFTDHSIDPNLLVNDVINVRGRMRERATS 505

Query: 423 ---KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
              K     ++ D +R  L+  G  + D+K   + 
Sbjct: 506 GNVKNPQLLAACDELRSLLQQHGIQVRDHKQGSSW 540


>gi|156744229|ref|YP_001434358.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156235557|gb|ABU60340.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 401

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 136/412 (33%), Positives = 201/412 (48%), Gaps = 37/412 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++TL  +  E        + +YVCG T YD  H+G+A   ++FDVL R +R+  G  
Sbjct: 1   MWLFDTLRGQKAELLIPRDRPLTLYVCGVTPYDTTHVGHAHTFLIFDVLIRYIRHCGG-- 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N TD+DD + ERA ++            +  + T+QFVKD   L  + P   P+
Sbjct: 59  TVRYCQNTTDVDDPLFERAARDGIPW------DELARRETEQFVKDCQALNLIPPDFFPK 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-----IDEQKMGTRV 179
           A+  I  MI +I+ ++  GHAY  N  + FD S+ P YG+ +R       +         
Sbjct: 113 ASEEIATMIPIIERLVELGHAYVRNGNVYFDVSTEPTYGAMARVDGYEALLALANERGNN 172

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K +P DF+LW+RS P EP W SPWGRGRPGWHIEC+AM++ YLG   DIHGGG D
Sbjct: 173 PNDPLKDDPLDFVLWQRSRPGEPTWPSPWGRGRPGWHIECTAMATRYLGPQIDIHGGGRD 232

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHH +EI Q+          + W+H G   L+G+KMSKS GN + I + L       
Sbjct: 233 LIFPHHPSEIVQTEPYTGKRPFVHFWVHGGLAWLDGQKMSKSLGNLVFIKDAL------- 285

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDP 349
           +   A  +R  +L   YR+  ++    +  A   + +      ++G              
Sbjct: 286 QQHSADALRWYLLSFPYRDDFEYVRSDVPLAVQQVERLTAALAAQGDSKGEPLNAEPFYQ 345

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGI 394
              +AL NDL+T  A+  +  L+    +                  AH+ G 
Sbjct: 346 TYFAALDNDLDTPKALAQIGALSNAILEAASSGYNVVGAQSALREMAHVFGF 397


>gi|225467252|ref|XP_002268960.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 408

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 143/406 (35%), Positives = 198/406 (48%), Gaps = 72/406 (17%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
            T L CL+PTHQPR ++H+ Q+  +I  II +  AY  + ++ F     PNYG  S RK+
Sbjct: 1   MTDLHCLSPTHQPRVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKL 60

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           +  + G RV     K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL   
Sbjct: 61  ENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFK 120

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG+DLIFPHHENEIAQSC A   E   + W+HNG +     KMSKS GNF TI +
Sbjct: 121 FDIHGGGIDLIFPHHENEIAQSCAA-CQESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT--------------VQRLTEAEILLSK 336
           + +        +    +R  +L THYR P++++               Q L + E  LS 
Sbjct: 180 ITDL-------YHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSL 232

Query: 337 WPQTSTSKGIIDPA-----------VLSALYNDLNTVSAI-QALHKLARESTKNHDLL-- 382
           + + +     I PA             + + +DL+T   +  +L +  R      ++L  
Sbjct: 233 FQEVNGRNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKK 292

Query: 383 -----------------PIFNASAHILGI-------EVCKEHLNKNI------SIAIEKL 412
                                    +LG+       EV ++   K +         +  L
Sbjct: 293 QQKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHL 352

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           ++ER +  K K FS  D IR  L SKG  L D        + T W+
Sbjct: 353 IEERALARKNKDFSKGDQIRADLASKGIALMDV------GKETIWR 392


>gi|301778487|ref|XP_002924663.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
          Length = 611

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 150/496 (30%), Positives = 224/496 (45%), Gaps = 93/496 (18%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y CGPTVYD AH+G+A   + FD++ R+L   +G   +  V  ITD+DDKII RA +   
Sbjct: 124 YSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGCN-IIMVMGITDVDDKIIRRAAE--- 179

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-E 147
              +N + + + +   + F +D   L  L PT   R T +IPQ+I  I+ II +GHAY  
Sbjct: 180 ---MNVSPASLANLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYST 236

Query: 148 ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           A   + FD  SI + YG                P    K++ +DF LWK + P E  W S
Sbjct: 237 AQGNVYFDLRSIGDKYGKLVGAVPSPVG----EPVDSDKRHASDFALWKAAKPQEVFWAS 292

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG+GRPGWHIECS +SS   G+  DIH GG DL FPHHENEIAQ     +  +  N ++
Sbjct: 293 PWGKGRPGWHIECSTISSLVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCRQWGNYFL 352

Query: 267 HNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           H+G L+++G   KMSKS  N+ITI + L+T       +P  V RL  + + YR  ID++ 
Sbjct: 353 HSGHLHVKGKEEKMSKSLKNYITIKDFLKT-------FPPDVFRLFCMRSAYRSAIDYSD 405

Query: 325 QRLTEAEILLSKWPQTSTSKGI----------------------IDPAVLSALYNDLNTV 362
             + EA+ LL                                     AV +AL +D +T 
Sbjct: 406 GTMLEAKQLLLAAAAFVEDARAYMKGQLVCGPVRDDVLWERLRHTKDAVKAALADDFDTP 465

Query: 363 SAIQALHKLARESTKNH-----------------DLLPIFNASAHILGIEVCK------E 399
           +A+ A+  L     +                    ++         +GI +        +
Sbjct: 466 AAVDAVMDLVHHGNRQLKAHAKEPGGPRSPAVFGSIVSYVERFFETVGISLADRQSVSGD 525

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSA-----------------------DYIRKQLE 436
                +   +E+LV+ RL + +   F+ A                       D +R+ L 
Sbjct: 526 SSRATLHSVVEELVRFRLQVRQ---FALATGAATREARRQQQLDRQPLLEACDALRRDLV 582

Query: 437 SKGFILEDYKNPDNGQ 452
           + G  ++D  +    +
Sbjct: 583 THGISIKDRSSTSTWE 598


>gi|284931715|gb|ADC31653.1| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 435

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 154/458 (33%), Positives = 229/458 (50%), Gaps = 50/458 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL +   +   ID + I +YVCGPTVYD  HIGN RP++ FDVL RLL +    K
Sbjct: 1   MKLYDTLTKTNVD---IDANEINIYVCGPTVYDHIHIGNLRPIVTFDVLRRLLEHS--NK 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V NITDIDDKII +A++      +N +   +T + T  + +    L    P    +
Sbjct: 56  KVNFVHNITDIDDKIINQAQR------LNLSEEEVTKRYTSAYFEILDALNIKLPKIV-K 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  +I  I+ I    +AYE + +I FDT+ IP+YG  S+RK+DEQ  G RV    +
Sbjct: 109 VTDVMNGIIKYIEKIYDKQYAYELDGDIYFDTTRIPDYGVLSKRKLDEQISGIRVKSNEN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFP 243
           K +P DF+LWK++      W S +G GRPGWH EC+ +       K F IHGGG+DL+FP
Sbjct: 169 KTSPNDFVLWKKTVNG-IKWNSKFGLGRPGWHTECAYIIDQEFKQKGFVIHGGGIDLVFP 227

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+      +  AN W+H G L ++  KMSKS  NFI +  L+E+  +      
Sbjct: 228 HHENENAQNLALHN-KNLANCWVHVGHLLIDNEKMSKSLNNFIYVKHLIESHNY------ 280

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------SKGIIDP 349
              IR     T + +P++F    +  A+  + K   T                S  ++  
Sbjct: 281 -RAIRWVFYNTAHTQPLNFDGTIIKAAQKDVEKIISTVNRFRTFLIANKNNIPSSSLVCE 339

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKEH 400
               AL+++LN  +A + +  L +   ++     I               I GI     H
Sbjct: 340 EFKKALFDNLNFANATKVIWDLIKVLNESIAYKKIDENIWAYQQLIWCLEIYGIVPDMIH 399

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             + I       + +   LL  K +  AD IR +L +K
Sbjct: 400 NEQIIDQ-----INQWSELLNNKDYEKADSIRNKLINK 432


>gi|42561475|ref|NP_975926.1| cysteinyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|61216209|sp|Q6MS23|SYC_MYCMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|42492974|emb|CAE77568.1| cysteine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321346|gb|ADK69989.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 441

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 139/464 (29%), Positives = 217/464 (46%), Gaps = 50/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L +       ++   I +Y CGPTVY++ HIGNARP+++ DVL R L+      
Sbjct: 1   MQLYNSLSKTKKT---LNKKTINLYCCGPTVYNYIHIGNARPILLVDVLIRYLKSRS--I 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII +A + + +         ++ K T  +++D   L    P     
Sbjct: 56  KVNYLQNITDIDDKIILKALENNLNEL------EVSQKYTSAYLEDLKSLNINQPDKIIL 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            +  + +MI  I+N++    AY  + ++ FD     N Y   S  K+DE   G RV    
Sbjct: 110 ISQKMNEMIDFIKNLVDINAAYVLDGDVYFDIKKYENEYCKLSGYKLDELISGKRVEIDS 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIF 242
            K    DF LWK+ T +   W+S +G GRPGWH EC  +   Y   +  DIH GG+DL F
Sbjct: 170 KKHYSLDFSLWKK-TDIGIKWDSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q    +  E  A+IW+HNG L +   KMSKS GN I + + +       +  
Sbjct: 229 PHHENERIQFIAKNNKE-LAHIWLHNGHLQINDEKMSKSLGNVILVRDFI-------KKH 280

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SKGI 346
               +R   L T+Y +P++ +   + +A     K    S                 +   
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKKDLKIKSINSSE 340

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
                   + +DLNT   +  +  L ++  KN         + L+   N    +LG +  
Sbjct: 341 YINKFNEYMEDDLNTSLVLSLIDLLIKQINKNIVDKNLDNFNLLIGSLNYILDVLGFDNV 400

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
               N       ++L  +   L+K K+F+ AD IR +L  +G +
Sbjct: 401 ---FNYKFDNKTKELFLKWQELVKNKEFNKADLIRNKLIEQGIL 441


>gi|203288037|ref|YP_002223052.1| cysteinyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085257|gb|ACH94831.1| cysteinyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 485

 Score =  386 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 144/490 (29%), Positives = 222/490 (45%), Gaps = 51/490 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  + ++E + +  +   +Y CGPTVY++AHIGN R  I  D+L + L+ +  + 
Sbjct: 7   LKLYNTKTKCLSEVKNLSETK--IYACGPTVYNYAHIGNLRTYIFEDLLIKSLKLF--KY 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     +    E   +         +  I+   T+ F  D  +L  L P 
Sbjct: 63  NVNYAMNITDIGHLTGDFDDGEDKVVKAAKERGLTVYDISRFFTKAFFDDCKKLNILYPD 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTR 178
               A+ +I  MI +++ +  +G  Y  N  + FD S   NYG  +   +++  +   +R
Sbjct: 123 KVLVASEYILDMIEVVKVLEKNGFTYFVNGNVYFDISRFKNYGQMAGINLNDINENSVSR 182

Query: 179 VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V   + K+N +DF+LW    +    E  W+SPWG G P WH+EC+ M+ +Y     +IH 
Sbjct: 183 VELDFSKRNKSDFVLWFTNSKFQNQEMKWDSPWGFGYPSWHLECATMNLNYFNSTLNIHL 242

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIA   C    +   +++IH  FL +E  KMSKSN +FITI  L +  
Sbjct: 243 GGIDHIRVHHVNEIAIMECYLG-KNWCDMFIHGEFLIMENEKMSKSNNDFITIKNLED-- 299

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID--- 348
                 +     R   L  HYR  + FT   L       E LLSK     +S    D   
Sbjct: 300 ----EGFSPLDFRYFCLTAHYRTQLKFTFHSLKACKVARENLLSKLTSCYSSLSQFDISL 355

Query: 349 -----------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAH 390
                             + L  +  DLN    +  L  + R++   +   L +      
Sbjct: 356 LSQDDENIEFILEHKYYDSFLERIAFDLNIPKVLALLWDIVRDNNLSSLSKLKLAFKFDE 415

Query: 391 ILGIEVCKEHLNK------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L + + +E L +       I   +  L++ER +    K F  AD IR+   SKGFIL D
Sbjct: 416 VLSLGLREEILREIDMSRIVIDDVMNSLIEERRLAKLKKDFKRADEIREYCRSKGFILID 475

Query: 445 YKNPDNGQRM 454
            +     +R 
Sbjct: 476 TEEGTKVKRG 485


>gi|284031725|ref|YP_003381656.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Kribbella flavida DSM 17836]
 gi|310947189|sp|D2PPT3|MSHC_KRIFD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|283811018|gb|ADB32857.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Kribbella flavida DSM 17836]
          Length = 406

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 130/404 (32%), Positives = 202/404 (50%), Gaps = 24/404 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +++++Y+T    + E         RMYVCG T YD  H+G+A   + FD++ RL R    
Sbjct: 17  RRLRLYDTASGGLVEVPPGPDGPARMYVCGITPYDATHMGHAATYVTFDLVNRLWRDAGY 76

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y +NITD+DD ++ERA             + +  +  Q F  D T L  + P   
Sbjct: 77  --TVHYTQNITDVDDPLLERA------TATGVEWTDLAEREIQLFRDDMTALRVIPPQEY 128

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTR-- 178
                 IP ++  I  +   G  Y+ + ++ F   + P +G  S    D  +   G R  
Sbjct: 129 VGVVESIPLVVERIAELQQAGAVYDVDGDLYFAVKADPAFGGISSYDADTMRTLFGERGG 188

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P++  K++P D ++W++  P EP W+SP+GRGRPGWHIECSA++  YLG   D+ GGG 
Sbjct: 189 DPDREGKRDPLDCLVWQQERPGEPAWDSPFGRGRPGWHIECSAIALQYLGMTIDVQGGGS 248

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHE   +++ CA      A  ++H   + L+G KMSKS GN + ++   +     
Sbjct: 249 DLIFPHHEMSASEAQCATGQHPFARAYVHQAMVGLDGEKMSKSKGNLVLVSRERQAGS-- 306

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLS 353
                   IRLA+L  HYR    +T   L +A+  L  W    T     D      A+ +
Sbjct: 307 ----DPMAIRLALLAHHYRTDWFWTDSELLDAQERLDVWRGAITRGTGPDGPAAVDALRA 362

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHILGIEV 396
           AL NDL+T +A+ A+ + A  +  + +   +   A   +LGI++
Sbjct: 363 ALTNDLDTTAALAAIDQWAETNGDDPEASALVALAVDALLGIKL 406


>gi|203284503|ref|YP_002222243.1| cysteinyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201083946|gb|ACH93537.1| cysteinyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 485

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 144/490 (29%), Positives = 220/490 (44%), Gaps = 51/490 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNT  + ++E + +  +   +Y CGPTVY++AHIGN R  I  D+L + L+ +  + 
Sbjct: 7   LKLYNTKTKCLSEVKNLSETK--IYACGPTVYNYAHIGNLRTYIFEDLLIKSLKLF--KY 62

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI----NDAISIITSKNTQQFVKDTTRLACLAPT 120
            V Y  NITDI     +    E   +         +  I    T+ F  D  +L  L P 
Sbjct: 63  NVNYAMNITDIGHLTGDFDDGEDKVVKAAKERGLTVCEIGKFFTKAFFDDCKKLNILHPD 122

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--QKMGTR 178
               A+ +I  MI +++ +  +G  Y  N  + FD S   NYG  +   +++  +   +R
Sbjct: 123 KVLVASEYILDMIEVVKVLEKNGFTYFVNGNVYFDISRFKNYGQMAGINLNDINENSVSR 182

Query: 179 VPEKYHKKNPADFILW---KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           V     K+N +DF+LW    +    E  W+SPWG G P WH+EC+ M+ +Y     +IH 
Sbjct: 183 VELDLSKRNKSDFVLWFTNSKFQNQEMKWDSPWGFGYPSWHLECATMNLNYFNSTLNIHL 242

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG+D I  HH NEIA   C    +   +++IH  FL +E  KMSKSN +FITI  L +  
Sbjct: 243 GGIDHIRVHHVNEIAIMECYLG-KNWCDMFIHGEFLIMENEKMSKSNNDFITIKNLED-- 299

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKGIID--- 348
                 +     R   L  HYR  + FT   L       E LLSK     +S    D   
Sbjct: 300 ----EGFSPLDFRYFCLTAHYRTQLKFTFHSLKACKVARENLLSKLTSCYSSLSQFDISL 355

Query: 349 -----------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAH 390
                             + L  +  DLN    +  L  + R++   +   L +      
Sbjct: 356 LSQDDENIEFILEHKYYDSFLERIAFDLNIPKVLALLWDIVRDNNLSSLAKLKLAFKFDE 415

Query: 391 ILGIEVCKEHLNK------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
           +L + + +E L +       I   +  L++ER +    K F  AD IR+   SKGFIL D
Sbjct: 416 VLSLGLREEILREIDRSRIVIDDVMNSLIEERRLAKLKKDFKRADEIREYCRSKGFILID 475

Query: 445 YKNPDNGQRM 454
            +     +R 
Sbjct: 476 TEEGTKVKRG 485


>gi|320011719|gb|ADW06569.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces flavogriseus ATCC 33331]
          Length = 409

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 195/381 (51%), Gaps = 28/381 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +   +  + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------VRDGEDWTELAERETALFREDMTALRMLPPKH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE + ++ F   S P++G  S    +  ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVESDPHFGEVSNLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMTFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEHPFAKAYVHAGMVGLDGEKMSKSKGNLVFVSALRRAD- 304

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     IRL +L  HYR   ++T Q L +A   L++W    +     S   +   V
Sbjct: 305 -----VDPAAIRLTLLAHHYRSDWEWTDQVLADAVERLARWRAAVSRPDGLSADALVEEV 359

Query: 352 LSALYNDLNTVSAIQALHKLA 372
             AL +DL+T +A+ A+ + A
Sbjct: 360 REALADDLDTPAALAAVDRWA 380


>gi|118617863|ref|YP_906195.1| cysteinyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|310947204|sp|A0PQV5|MSHC_MYCUA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|118569973|gb|ABL04724.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium ulcerans Agy99]
          Length = 411

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 124/412 (30%), Positives = 203/412 (49%), Gaps = 33/412 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++Y+T +R++        +   MYVCG T YD  H+G+A   + FD+++RL     
Sbjct: 16  EPELRLYDTADRQVRPVAP--GNTATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV+N+TD+DD + ERA ++            + ++    F +D   L  L+P  
Sbjct: 74  HE--VRYVQNVTDVDDPLFERADRD------GVDWRDLAAQEVALFREDMAALRVLSPHD 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQ----K 174
              AT  + ++I L++ ++  G AY  +    ++ + + +   +G  S    D      +
Sbjct: 126 YVGATEAVAEIIELVEKLLASGAAYVLDGEHPDVYYRSDATLQFGYESGYDRDTMLGLFE 185

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P +  K +  D +LW+ + P EP W SP+G GRPGWHIEC+A++   +G   D+ 
Sbjct: 186 QRGGDPGRPGKNDALDALLWRAARPGEPSWPSPFGPGRPGWHIECAAIALSRVGSGLDVQ 245

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A + C    ++ A  ++H G +  +G KMSKS GN + ++     
Sbjct: 246 GGGSDLIFPHHEFTAAHAECVTGEQRFARHYVHAGMIGWDGHKMSKSRGNLVLVS----- 300

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
                       +RL +L  HYR    ++ Q L EA   L +W   +T     D A    
Sbjct: 301 -GLRAEGVNPAAVRLGLLAGHYRADRFWSQQVLDEAVGRLQRWRAATTLPAGPDAAAVVA 359

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNAS--AHILGIEV 396
            V   L +DLNT  AI AL   A ++     + ++ P   AS    +LG+++
Sbjct: 360 RVRQYLADDLNTPKAIAALDGWATDALDYGGHDEVAPRLVASTIDALLGVDL 411


>gi|195334248|ref|XP_002033796.1| GM20229 [Drosophila sechellia]
 gi|194125766|gb|EDW47809.1| GM20229 [Drosophila sechellia]
          Length = 558

 Score =  384 bits (986), Expect = e-104,   Method: Composition-based stats.
 Identities = 147/515 (28%), Positives = 225/515 (43%), Gaps = 86/515 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYN   R+       +P  +  Y CGPTVYD AH+G+A   +  D+L R+LR Y+ 
Sbjct: 46  TGINIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFK 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITD+DDKII+RA+                     +F +D  RL   A   +
Sbjct: 106 INLVT-AMNITDVDDKIIKRAQLAGLDWQKM------ARAYEAEFRQDMLRLNVQAADVR 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              T  +P +I  IQ +I    AY   +N + FD S   NYG      + E K+      
Sbjct: 159 SHVTTTMPVIIQFIQQLIAEKQAYVTPDNSVYFDVSKSKNYGKLQNLGLSEDKL------ 212

Query: 182 KYHKKNPADFILWKRSTPM-EPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK      EP W +PWG  GRPGWHIECSA++  + G+  DIH GGLD
Sbjct: 213 DPIKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDIHAGGLD 272

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + ++  N W+H G L++  + +KMSKS GN I+++ELL     
Sbjct: 273 LRFPHHENEEAQCCARYKTDQWVNYWLHTGQLHMVGDAQKMSKSLGNTISVSELL----- 327

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
             + + A   R+A L+++YR  + ++ Q +  A   L ++                    
Sbjct: 328 --KKYTADEFRMACLLSNYRNAMPYSDQLMLTARQTLQRFKNFQADLSAYTQFLKPVHLL 385

Query: 350 --------------AVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLP 383
                            + L +D +T  AI  L       ++  +             + 
Sbjct: 386 DEGALKAQLTHTVTEFDNCLRDDFDTARAISVLMDQMSSISRCINEQQVDAQEEPAYCID 445

Query: 384 IFNASAHI-------LGIEVCK--EHLNKNIS---------IAIEKLVQERLILLKM--- 422
           +  A+ +         G+   +  E L + +S         + +  ++  R  + +    
Sbjct: 446 LLLAAGNFINRGIVTFGLSELQDRESLQEKVSFTDHSIDPNLLVNDVINVRGRMRERATS 505

Query: 423 ---KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
              K     ++ D +R  L+  G  + D+K   + 
Sbjct: 506 GNVKNPQLLAACDELRSLLQQHGIQVRDHKQGSSW 540


>gi|326780298|ref|ZP_08239563.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces cf. griseus XylebKG-1]
 gi|326660631|gb|EGE45477.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces cf. griseus XylebKG-1]
          Length = 409

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 195/381 (51%), Gaps = 28/381 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +      + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------VRDGQDWTELAERETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AY+ + +I F   + P++G  S    +  ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDSGAAYDLDGDIYFSVDTDPHFGEVSGLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  + P EP W+    G GRPGWHIEC A++  +LG  FDI GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARPGEPSWDGASLGEGRPGWHIECVAIALDHLGMGFDIQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSTLRR--- 302

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     +RLA+L  HYR   ++T Q L EA   L++W    +     S   +   V
Sbjct: 303 ---EGVDPAALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALVEEV 359

Query: 352 LSALYNDLNTVSAIQALHKLA 372
             AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380


>gi|26553474|ref|NP_757408.1| cysteinyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|61216349|sp|Q8EX28|SYC_MYCPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|26453480|dbj|BAC43812.1| cysteinyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 439

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 154/460 (33%), Positives = 224/460 (48%), Gaps = 50/460 (10%)

Query: 5   IKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +KIY+ + +       ++D  NI+MYVCGPTVY+  HIGN RP+I FDVL RL       
Sbjct: 1   MKIYDFVSKTDKE--VSLDKKNIKMYVCGPTVYNHVHIGNLRPIITFDVLNRLFLELGYN 58

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT-HQ 122
             VT++ NITDIDDKI+ +A++E      N     ++S    Q+      +         
Sbjct: 59  --VTFIHNITDIDDKIVNKAKEE------NIGELELSSYYETQYFDILKTINIHTSNMKF 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR ++HI  +   IQ I+ +  AY  + ++ FDT+    YG  S +K+DE  +G +  + 
Sbjct: 111 PRVSDHIKDIENYIQKIVNNKFAYLVDGDVYFDTTKSNQYGKISNKKLDELLVGDKSEDN 170

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K NP DF LWK++T     W+  +  GRPGWH ECS + + YLG   DIHGGG+DL F
Sbjct: 171 LKKNNPQDFALWKQTTIG-LNWDLKFSTGRPGWHTECSCLINKYLGDQIDIHGGGIDLKF 229

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q+   +  +  A IW+H G LN+  +KMSKS  NFI   +LL         +
Sbjct: 230 PHHENENIQNIAVNN-KDLARIWMHVGHLNINNQKMSKSLSNFILAKDLLS-------EY 281

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKGIID 348
               +R     T Y  P++FT + L  ++  L                  + +      D
Sbjct: 282 NTNTVRWFFYQTSYSNPLNFTTENLINSKNQLENIIYNLNIFKSHLIIEQKYNEKNLEFD 341

Query: 349 PAVLSALYNDLNTVSAIQALHKLARES-----TKNHDLLPIFNA-----SAHILGIEVCK 398
            + L  L N+ N  + +  + +  + S      KN + L   +         ILGI    
Sbjct: 342 KSNLIELTNNFNLPNIVSFIEEKIKYSSILLRNKNFEELNKLHFNLSYLLTKILGII--- 398

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            H+N     AIE L+ +   L + K FS +D  RK L  K
Sbjct: 399 -HVNLFDDEAIE-LLNKWNKLKQEKNFSESDKYRKLLMEK 436


>gi|195149692|ref|XP_002015790.1| GL10829 [Drosophila persimilis]
 gi|194109637|gb|EDW31680.1| GL10829 [Drosophila persimilis]
          Length = 556

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 149/522 (28%), Positives = 228/522 (43%), Gaps = 87/522 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+IYN   R+       +P+ +  Y CGPTVYD AH+G+A   +  D++ R+LR Y+ 
Sbjct: 46  TDIRIYNNGMRRKVPLILRNPNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQRILRNYFN 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITD+DDKII +AR                     +F +D  RL    P  +
Sbjct: 106 INLVT-AMNITDVDDKIIRKARDSGCDWLGM------ARTYEAEFKQDMLRLNVQPPDIR 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              T+++P ++  I+ +I   HAY   +N + FD S  P+YG   R       M T    
Sbjct: 159 THVTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPHYGKLQR-----LGMSTEEKS 213

Query: 182 KYHKKNPADFILWKRSTP-MEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK      EP W +PWG  GRPGWHIECSA++  + G   D H GGLD
Sbjct: 214 DLFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAGFFFGHKLDFHAGGLD 273

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + ++  N W+H G L + G  +KMSKS GN I+I+E+L     
Sbjct: 274 LRFPHHENEEAQCCVRYQTDQWVNYWMHTGQLYIAGDEQKMSKSLGNTISISEML----- 328

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
             +S+ +   R+A L+++YR  + ++ Q +  A   L ++                    
Sbjct: 329 --QSYTSDEFRMACLLSNYRNAMPYSEQLMLTARQTLQRFKNFQADLSAYTQFLKPIRKL 386

Query: 350 --------------AVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLP 383
                            S+L +D +T   +  L       ++  +             L 
Sbjct: 387 DEGALKAQIAHMVTEFDSSLRDDFDTARGVSVLIDQMTSISRCINEQQVDAEEEPAYCLD 446

Query: 384 IFNASA-----HILGIEVCKEHLNKNISIAI-----------EKLVQERLILL------- 420
           +  A+       +L   + K    +++S  I             L+ + L +        
Sbjct: 447 LLTAAGNYINRAMLTFGITKLTETESLSQEIPLPTAGGAVDPALLIADILAIRGKLRREA 506

Query: 421 ---KMKK---FSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
              + K     ++ D +R  LE  G  + D+K   +    +R
Sbjct: 507 ISGQQKNIPLLAACDELRNLLEQHGIQIRDHKEGSSWVYASR 548


>gi|183983109|ref|YP_001851400.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium marinum M]
 gi|310947198|sp|B2HFY1|MSHC_MYCMM RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|183176435|gb|ACC41545.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium marinum M]
          Length = 411

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 124/411 (30%), Positives = 201/411 (48%), Gaps = 33/411 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T +R++        +   MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 17  PELRLYDTADRQVRPVAP--GNTATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGH 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV+N+TD+DD + ERA ++            + ++    F +D   L  L+P   
Sbjct: 75  E--VRYVQNVTDVDDPLFERADRD------GVDWRDLAAQEVALFREDMAALRVLSPHDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQ----KM 175
             AT  + ++I L++ ++  G AY  +    ++ + + +   +G  S    D      + 
Sbjct: 127 VGATEAVAEIIELVEKLLASGAAYVLDGEHPDVYYRSDATLQFGYESGYDRDTMLGLFEQ 186

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P +  K +  D +LW+ + P EP W SP+G GRPGWHIEC+A++   +G   D+ G
Sbjct: 187 RGGDPGRPGKNDALDALLWRAARPGEPSWPSPFGPGRPGWHIECAAIALSRVGSGLDVQG 246

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++      
Sbjct: 247 GGSDLIFPHHEFTAAHAECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVS------ 300

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
                      +RL +L  HYR    ++ Q L EA   L +W   +T     D A     
Sbjct: 301 GLRAEGVNPAAVRLGLLAGHYRADRFWSQQVLDEAVGRLQRWRAATTLPAGPDAAAVVAR 360

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNAS--AHILGIEV 396
           V   L +DLNT  AI AL   A ++     + ++ P   AS    +LG+++
Sbjct: 361 VRQYLADDLNTPKAIAALDGWATDALDYGGHDEVAPRLVASTIDALLGVDL 411


>gi|182439633|ref|YP_001827352.1| cysteinyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|310947221|sp|B1W2Y7|MSHC_STRGG RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|178468149|dbj|BAG22669.1| putative cysteinyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 409

 Score =  383 bits (984), Expect = e-104,   Method: Composition-based stats.
 Identities = 124/381 (32%), Positives = 195/381 (51%), Gaps = 28/381 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +      + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------VRDGQDWTELAERETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AY+ + +I F   + P++G  S    +  ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYDLDGDIYFSVDTDPHFGEVSGLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  + P EP W+    G GRPGWHIEC A++  +LG  FDI GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARPGEPSWDGASLGEGRPGWHIECVAIALDHLGMGFDIQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSTLRR--- 302

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     +RLA+L  HYR   ++T Q L EA   L++W    +     S   +   V
Sbjct: 303 ---EGVDPAALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALVEEV 359

Query: 352 LSALYNDLNTVSAIQALHKLA 372
             AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380


>gi|258597035|ref|XP_001347434.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
 gi|254922413|gb|AAN35347.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
          Length = 677

 Score =  383 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 145/489 (29%), Positives = 221/489 (45%), Gaps = 68/489 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ 
Sbjct: 105 TNLFVNNSLTHSKVEFIPQEGNKIKWYACGPTVYDAAHLGHARTYVSFDIIRRILVNYF- 163

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V NITDIDDKII+R+ +E          + +  K   +F +D   L  L PT  
Sbjct: 164 KYDVFMVINITDIDDKIIKRSVEEK------IGFTELARKWEYEFWEDMKSLNVLLPTAI 217

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDE--------- 172
            R + ++  ++  I+ II + +AY +    + FD             +++          
Sbjct: 218 TRVSEYVGDIVKYIEKIIENKYAYVSEEGSVYFDIDEFKKSEKHFYARMEPLSVKDENKI 277

Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            +  G        KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V 
Sbjct: 278 LEGEGDLGVISKKKKNAYDFALWKSSKPNEPHWDSPWGKGRPGWHIECSTMASNILGDVL 337

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +
Sbjct: 338 DIHSGGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNM 397

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEA-----------EILLSK-- 336
           L         + +  IR+  L+  +   ++++   + + +             I+L K  
Sbjct: 398 LT-------KYTSNQIRILFLLNKWDNFMNYSPNGESMVQCIEIDKSFTNFFAIILMKIK 450

Query: 337 ----------WPQTSTSKGII----DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
                     W        ++       +     ++ NT  A+ A+ KL  E     D  
Sbjct: 451 NFDLNSCNLYWSDADNKLNLLFRQTKNKIHEHFLDNFNTPDALLAIQKLITEINIYMDKE 510

Query: 383 PI-----------FNASAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSAD 429
            I            N      G+        K       ++ L   R  +    + S+A 
Sbjct: 511 KIQIGLLLEIKHYINFIFDTFGLIYGDAPKGKYDKFDELLQTLGTYRRNIRINLQ-SNAK 569

Query: 430 YIRKQLESK 438
            IR  L+ K
Sbjct: 570 LIRNILKEK 578


>gi|312197580|ref|YP_004017641.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EuI1c]
 gi|311228916|gb|ADP81771.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EuI1c]
          Length = 426

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 125/421 (29%), Positives = 202/421 (47%), Gaps = 36/421 (8%)

Query: 6   KIYNTLERKITEFQAIDPS-------NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           ++++T   ++       P+       ++ +YVCG T YD  H+G+A   + +D+L R LR
Sbjct: 20  RLFDTSRGRLEPVGPELPAAAGTAGPSVSLYVCGITPYDATHLGHAFTYVTYDLLNRALR 79

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
               +  V +V N+TD+DD ++ERA ++          + +  + T+ F  D T L  L 
Sbjct: 80  DAGYQ--VRFVENVTDVDDPLLERAARD------GVDWTEVAERETELFRTDMTALRVLP 131

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT- 177
           P H       IP ++ ++  ++  G  Y  + ++ F  ++ P +G  S       +  + 
Sbjct: 132 PDHYVGVVEAIPLIVEMVTELVAAGATYTLDGDVYFSVAAAPRFGYVSGLDAAAMRALSA 191

Query: 178 ---RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  KK+P D  LW+   P EP W SP+G GRPGWHIECSA++  YLG V D+ 
Sbjct: 192 ERGGDPDRRGKKDPLDPPLWRAEQPGEPSWPSPFGPGRPGWHIECSAIARRYLGDVIDVQ 251

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHE   A +  A      A  ++H G + L+G KMSKS GN   ++ L   
Sbjct: 252 GGGEDLVFPHHECSSAHAEVATGHNPFARRYVHTGMVGLDGHKMSKSRGNLELVSRLR-- 309

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                R      IRLA+L   +R+  ++T   L  AE  L +W          D      
Sbjct: 310 ----ARGVAPAAIRLALLAHSHRDDWEWTEGELAAAEARLGRWRAAVALPAGPDATGLLA 365

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASA--HILGIEVCKEHLNK 403
            V +A+ +DL+T +A+ A+ + A  +           P         +LG+++ K   N 
Sbjct: 366 EVRAAVASDLDTPTALGAVDRWAATALAGTGGGDTAAPELTRLLVDALLGVDLGKVETNG 425

Query: 404 N 404
           +
Sbjct: 426 S 426


>gi|123477243|ref|XP_001321790.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
 gi|121904623|gb|EAY09567.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
          Length = 660

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 154/542 (28%), Positives = 223/542 (41%), Gaps = 102/542 (18%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +   IKIYN+L   I   +      +R Y CGPTVY  +H+G+AR  + FD++ R+L  Y
Sbjct: 7   VDTGIKIYNSLGANIVPLKREKGLPLRCYTCGPTVYSTSHLGHARTYLSFDMIRRILTDY 66

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI-ITSKNTQQFVKDTTRLACLAP 119
           +    V +  N+TDIDDKII                ++  ++   + F  +   L    P
Sbjct: 67  F-NIPVQWSMNVTDIDDKIINTFNGMSDDKKAKYGTALGYSADREKAFFAELDTLNIRRP 125

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ------ 173
               R +  IP++I  I N+     AYE+   + FD     + G F   +++ Q      
Sbjct: 126 DALLRVSEVIPEIIEFISNLEEKSFAYESEGSVYFDVEKFEHDGRFVYAELERQSYLGTA 185

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGK 229
           K       +  K+N  DF LWK++ P E      WE+ WGRGRPGWHIECS MS  + G 
Sbjct: 186 KSENPEDMQEKKRNRNDFALWKKAKPEEEAAGQYWETKWGRGRPGWHIECSTMSGLFYGP 245

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN-LEGRKMSKSNGNFITI 288
            FD+H GG+DL FPHH NEIAQS            W+H G L    G KMSKS GNF ++
Sbjct: 246 QFDLHAGGIDLRFPHHSNEIAQSQARWEKVPWVRNWMHTGTLRAANGEKMSKSLGNFFSV 305

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII- 347
            +       G + W   V+R+    +HYR P+D +   +++A++ LSK     +S   + 
Sbjct: 306 QD-------GLQHWSPAVLRMIFCQSHYRNPMDLSEDNISQAQVKLSKITNFLSSIEPLT 358

Query: 348 --------------DPAV-----------LSALYNDLNTVSAIQALHKLARESTKNHDL- 381
                         D A                 +D +   A+ AL  L  E  KN D+ 
Sbjct: 359 LKSISELKRGFKPEDKAFSYFIAKTAEDIERYFADDFDIPKAVNALVALIDEYNKNKDVV 418

Query: 382 --------LPIFNASAHILGIE---VCKEHLNKNISIA-----------------IEKLV 413
                     +      +LG     V     N N++ +                 I  L 
Sbjct: 419 IDSLVVEAAKLVRRIMVVLGFSPETVLLSQSNTNLNESGFPQAMAAYRQNVRTNNINMLK 478

Query: 414 QERLILLK-----MKKFSSA---------------------DYIRKQ-LESKGFILEDYK 446
           Q R +         K+ + A                     D +R + L S G  LED  
Sbjct: 479 QVRELAKSLNIDMKKQPAEANPVYDLLKQLETGVKENMTQLDTLRDESLPSIGIKLEDNA 538

Query: 447 NP 448
           N 
Sbjct: 539 NG 540


>gi|296165216|ref|ZP_06847763.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
 gi|295899405|gb|EFG78864.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
          Length = 411

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 128/411 (31%), Positives = 202/411 (49%), Gaps = 33/411 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T +R++        S   MYVCG T YD  H+G+A   + FD++YR  ++   
Sbjct: 17  PELRLYDTSDRQVRPVAP--GSTATMYVCGITPYDSTHLGHAATYLTFDLVYR--QWLDL 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++            +  +   +F +D   L  L P   
Sbjct: 73  GHDVHYVQNVTDVDDPLFERAERD------GVDWRELGDREVARFREDMAALRVLPPREY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRKIDEQ----KM 175
             AT  IP+++ L++ ++  G AY  + +   + +   + P +G  S    +        
Sbjct: 127 VAATQAIPEVVELVEKMLASGGAYVIDGDYPDVYYRADATPQFGYESGYDRETMLRLFGE 186

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               PE+  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++S  +G   DI G
Sbjct: 187 RGGDPERAGKTDELDALLWRAARPGEPSWPSPFGDGRPGWHVECAAIASSRIGSGLDIQG 246

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ L    
Sbjct: 247 GGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTLR--- 303

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
               +      IRL +L  HYR    ++ Q L EA   L +W   +      D A     
Sbjct: 304 ---AQGVEPAAIRLGLLSGHYRADRFWSPQVLEEANTRLGRWRSATGLPAGPDAADVIAR 360

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
           V   L +DLNT  A+ AL   A ++ +   HD      +  A   +LG+E+
Sbjct: 361 VRQYLADDLNTPKALAALDGWATDALEYGGHDTDAPRLVATAIDALLGVEL 411


>gi|115903770|ref|XP_796899.2| PREDICTED: similar to MGC88928 protein [Strongylocentrotus
           purpuratus]
 gi|115973007|ref|XP_001191711.1| PREDICTED: similar to MGC88928 protein [Strongylocentrotus
           purpuratus]
          Length = 523

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 140/520 (26%), Positives = 228/520 (43%), Gaps = 75/520 (14%)

Query: 2   KKKIKIYNTLER-------KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLY 54
           +  + + N+L         K      ++ +    + CGPTVYD AHIG+A   + FD++ 
Sbjct: 14  RTTVHVLNSLTAAHDRKSAKKEPLLLMNKNVATWFACGPTVYDSAHIGHASSYVRFDIIR 73

Query: 55  RLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
           R+L   + +  V  V  ITDIDDKII R+ +++           +     ++F +D   L
Sbjct: 74  RIL-AEFFQTSVVMVMGITDIDDKIIRRSHEQNLK-----DFRELAGFYEREFYQDMQHL 127

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSI--PNYGSFSRRKID 171
             L  T   R ++HIP+++  I +II +G+ Y  ++  + F+  +     Y   + + +D
Sbjct: 128 KVLPATVYTRVSDHIPEILTFIDSIIKNGYGYSTSSGSVYFNVDAFTLERYDKLASQDLD 187

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            Q    +      K++P DF LWK   P EP W++PWG+GRPGWHIECSAMS    G+  
Sbjct: 188 VQHDEGKEFIDPEKRHPRDFALWKGVKPGEPWWDAPWGKGRPGWHIECSAMSKAIFGERL 247

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITIN 289
           DIH GG DL FPHH NEIAQ        + AN ++H+G L    +  KMSKS  N ++I 
Sbjct: 248 DIHTGGRDLAFPHHNNEIAQCEACFNSNQWANYFLHSGHLYRKYDADKMSKSLQNVVSIQ 307

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--- 346
           + L+T       +     R   LM+ Y   +++    + +A +L  +             
Sbjct: 308 DFLKT-------YTPNQFRFLCLMSKYDHDLEYGPDTMQQAVVLHRQMSAFLNDADAYVK 360

Query: 347 -------------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---I 384
                                  V+ AL +D +T  A+  + KLA     N   +     
Sbjct: 361 GQICCKPFNEAELMQRLETTREEVIEALADDFDTKRALDCIMKLAHTCNSNFSQVSESTQ 420

Query: 385 FNASAHILGI----------EVCKEHLNKNISIAI-----------EKLVQERLILLKMK 423
            + S+  + +          +V +  L       I           + + Q R  L+K +
Sbjct: 421 LDQSSQAMTVALDTLVNFRQDVRRWALTDQEDHGISSVSQSSHGDSDDVRQRRRKLMKER 480

Query: 424 K--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
               ++ D++R  L   G  ++D       + +   KQKP
Sbjct: 481 APLLNACDHVRDTLTQNGIQIKDRGATATWEFVE--KQKP 518


>gi|257056227|ref|YP_003134059.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|310947214|sp|C7MWX8|MSHC_SACVD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256586099|gb|ACU97232.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 415

 Score =  381 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 122/393 (31%), Positives = 198/393 (50%), Gaps = 31/393 (7%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            + +++Y+T   +I       P  + +MYVCG T YD  H+G+A   + FD+++RL    
Sbjct: 16  SRPLRLYDTATGQIR---PTAPGRVAKMYVCGITPYDATHLGHAATYLAFDLVHRLWLDA 72

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V YV+N+TDIDD ++ERA ++       +   ++  + T  F +D   L  L P 
Sbjct: 73  GHE--VHYVQNVTDIDDPLLERAERDS------EDWVVLGLRETALFREDMEALRVLPPR 124

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKM- 175
               A   IP+++ +I+ ++  G AY  ++    ++ FD S    +G  S    +  +  
Sbjct: 125 DFVGAVESIPEVVEMIEKLLASGAAYRVDDPEYPDVYFDRSFTGRFGYESNYDDETMRAI 184

Query: 176 ---GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                  P++  K++P D +LW+   P EP W+S  GRGRPGWHIECSA++  +LG  FD
Sbjct: 185 FPERGGDPDRPGKRDPLDALLWRVERPGEPAWDSSLGRGRPGWHIECSAIALKHLGIGFD 244

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL+FPHHE   A +         A  ++H G + L+G KMSKS GN + ++ L 
Sbjct: 245 VQGGGSDLVFPHHEFSAAHAEAMTGEHPFARHYVHAGMIGLDGEKMSKSKGNLVFVSRLR 304

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV- 351
                         IRLA+   HYR+  ++T + L +A   L++W +  +     D    
Sbjct: 305 ADD------VDPSAIRLALFAGHYRDDREWTDELLKQANSRLARWREAVSLPSGPDAEAT 358

Query: 352 ----LSALYNDLNTVSAIQALHKLARESTKNHD 380
                  L +DL+T  A+ A+     E+ ++  
Sbjct: 359 VDRLRDHLADDLDTPKALAAVDAWVDEALRHRS 391


>gi|198456470|ref|XP_001360335.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
 gi|198135626|gb|EAL24910.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
          Length = 556

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 152/522 (29%), Positives = 227/522 (43%), Gaps = 87/522 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YN   R+       + + +  Y CGPTVYD AH+G+A   +  D++ R+LR Y+ 
Sbjct: 46  TDIRVYNNGMRRKVPLILRNQNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQRILRNYFN 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITD+DDKII +AR                     +F +D  RL    P  +
Sbjct: 106 INLVT-AMNITDVDDKIIRKARDSGCDWLGM------ARTYEAEFKQDMLRLNVQPPDIR 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              T+++P ++  I+ +I   HAY   +N + FD S  P+YG   R       M T    
Sbjct: 159 THVTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPHYGKLQR-----LGMSTEEKS 213

Query: 182 KYHKKNPADFILWKRSTP-MEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
              K+N ADF LWK      EP W +PWG  GRPGWHIECSA++  + G   D H GGLD
Sbjct: 214 DLFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAGFFFGHKLDFHAGGLD 273

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   + ++  N W+H G L + G  +KMSKS GN I+I+E+L     
Sbjct: 274 LRFPHHENEEAQCCVRYQTDQWVNYWMHTGQLYIAGDEQKMSKSLGNTISISEML----- 328

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
             +S+ +   R+A L+++YR  + ++ Q +  A   L ++                    
Sbjct: 329 --QSYTSDEFRMACLLSNYRNAMPYSEQLMLTARQTLQRFKNFQADLSAYTQFLKPIRKL 386

Query: 350 --------------AVLSALYNDLNTVSAIQALHKLARESTK---------------NHD 380
                            S+L +D +T   +  L       ++                 D
Sbjct: 387 DEGALKAQIAHMVTEFDSSLRDDFDTARGVSVLIDQMTSISRCINEQQVDAEEEPAYCLD 446

Query: 381 LLPI----FNASAHILGI--EVCKEHLNKNIS-----------IAIEKLVQERLILL--- 420
           LL       N +    GI      E L++ IS           + I  ++  R  L    
Sbjct: 447 LLTAAGNYINRAMLTFGITKLTETESLSQEISLPTAGGAVDPALLIADILAIRGKLRREA 506

Query: 421 ---KMKK---FSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
              + K     ++ D +R  LE  G  + D+K   +    +R
Sbjct: 507 ISGQQKNIPLLAACDELRNLLEQHGIQIRDHKEGSSWVYASR 548


>gi|195122364|ref|XP_002005681.1| GI18944 [Drosophila mojavensis]
 gi|193910749|gb|EDW09616.1| GI18944 [Drosophila mojavensis]
          Length = 537

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 145/518 (27%), Positives = 226/518 (43%), Gaps = 86/518 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I IYN   R        +P  +  Y CGPTVYD  H+G+A   +  D++ R+LR Y+ 
Sbjct: 25  TGINIYNHRVRGKVPLVLRNPHMVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDYFK 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              +T   NITD+DDKII R++++  +         +      +F ++  RL    P  +
Sbjct: 85  YNLIT-AMNITDVDDKIITRSKEQGRNW------QELARTYDAEFKENMLRLNVKPPNMR 137

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              + +IP +   I+ +I +  AY A +  + FD S   NYG       +E  +      
Sbjct: 138 AHVSANIPVIQRFIEQLIENQQAYVAEDKSVYFDVSKCQNYGKLQNISKEEWALQ---EN 194

Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           +  K++ ADF LWK      EP W S WG  GRPGWHIECSA++  + G+  D H GGLD
Sbjct: 195 EQGKRSAADFALWKAKKAKYEPSWSSKWGGEGRPGWHIECSAIAGMFFGEELDFHAGGLD 254

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
           L FPHHENE AQ C   +  +  N W+H G L+L  + +KMSKS GN IT++E+L     
Sbjct: 255 LRFPHHENEEAQCCAHFKKNQWVNYWLHTGQLHLLGDQQKMSKSLGNTITVDEML----- 309

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
             +S+ A   R+A L+++Y   + ++ Q +  A   L K+                    
Sbjct: 310 --KSYTADEFRMACLLSNYNNAMPYSDQLMLTARQTLKKFRNFHADLNAYMQFQKAPKFL 367

Query: 350 --------------AVLSALYNDLNTVSAIQAL------------HKLARESTKNHDLLP 383
                            ++L +D +T  AI  L            H+ A    +    L 
Sbjct: 368 DRGALQSQLDHMVLEFDNSLRDDFDTARAISVLMDQMSSISRCINHQSADAEQEPGHCLD 427

Query: 384 IFNASAHI-------LGIEVCKEHLN-------------KNISIAIEKLVQERLILLKM- 422
           +  A+ +        LGI    +  N              ++++ +  L+  R  L +  
Sbjct: 428 LLLAAGNFIGSSMLNLGISSLADSSNLLSQQQQANSSAQVDVNLLVADLLAIRSQLREQA 487

Query: 423 ------KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
                 KK      +D +R  L+  G  + D+K   + 
Sbjct: 488 AESANVKKLELLELSDRLRNVLQEHGINVRDHKQGSSW 525


>gi|15384254|gb|AAK96213.1|AF405551_1 cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 406

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 134/424 (31%), Positives = 202/424 (47%), Gaps = 50/424 (11%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+  
Sbjct: 171 SMVFETLALTDTPYQIDIHAGGADLVFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINN 229

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN   I + L       +++   ++R  +L  HYR  ++F  + L  ++  L 
Sbjct: 230 EKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLD 282

Query: 336 KWPQTS----TSKGIIDPAV----LSALYNDLNTVSAIQALHKLARESTKNHD------- 380
           K  +       + G I+P      L  + +DLN   A+  L  +   + +  D       
Sbjct: 283 KIYRLKQRVLGTLGGINPNFKKEILECMQDDLNVSKALSVLENMLSSTNEKLDQNPKNKA 342

Query: 381 ----LLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADY 430
               +L        +LGI             +++    IE  ++ER      K F  AD 
Sbjct: 343 LKGEILANLKFVEELLGIGFKDPSAYFQLGVSESEKQEIENKIEERKRAKAQKDFLKADS 402

Query: 431 IRKQ 434
           IR++
Sbjct: 403 IREE 406


>gi|256384189|gb|ACU78759.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385021|gb|ACU79590.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455708|gb|ADH21943.1| cysteine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 441

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 136/464 (29%), Positives = 213/464 (45%), Gaps = 50/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++L +       ++   I +Y CGPTVY++ HIGNARP+++ DVL R L+      
Sbjct: 1   MQLYDSLSKTKKN---LNKKTINLYCCGPTVYNYIHIGNARPVLLVDVLIRYLKSR--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII +A   + +         ++ K T  +++D   L    P     
Sbjct: 56  KVNYLQNITDIDDKIILKALDNNLNEL------EVSQKYTTAYLEDLKSLNINQPDKIIL 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            +  + +MI  I+N++    AY  + ++ FD     N Y   S  K+DE   G R+    
Sbjct: 110 ISQKMNEMIDFIKNLVDINAAYVLDGDVYFDIKKYENEYCKLSGYKLDELISGKRIEIDS 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIF 242
            K    DF LWK+ T +   W S +G GRPGWH EC  +   Y   +  DIH GG+DL F
Sbjct: 170 KKHYSLDFSLWKK-TDIGIKWNSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q    +  E  A+IW+HNG L +   KMSKS GN I + +         +  
Sbjct: 229 PHHENERIQFIAKNNKE-LAHIWLHNGHLQINDEKMSKSLGNVILVRDF-------NKQH 280

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SKGI 346
               +R   L T+Y +P++ +   + +A     K    S                 +   
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKNDLKIQSINSSE 340

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
                   + +DLNT   +  +  L ++  K+         + L+   N    +LG    
Sbjct: 341 YINKFNEYMEDDLNTSLVLSLIDLLIKQINKDIVDKNLDNFNLLIGSLNYILDVLGFNNV 400

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
               N       ++L  +   L+K K+F+ AD IR +L  +G +
Sbjct: 401 ---FNYKFDNKTKELFLKWQELVKNKEFNKADIIRNKLIEQGIL 441


>gi|50364902|ref|YP_053327.1| cysteinyl-tRNA synthetase [Mesoplasma florum L1]
 gi|61216193|sp|Q6F230|SYC_MESFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|50363458|gb|AAT75443.1| cysteinyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 441

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 146/464 (31%), Positives = 226/464 (48%), Gaps = 50/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+++TL ++    + I+   I +Y CGPT+YD+ HIGNARP+I+ D L R L       
Sbjct: 1   MKLFDTLTQEQ---KNINKEVINIYSCGPTIYDYIHIGNARPIILMDTLIRFLESEG--I 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +++NITDIDDKIIE+A QE      N     IT K    F+++   L    P     
Sbjct: 56  KVNFLQNITDIDDKIIEKAIQE------NKTEKEITDKYLSAFLQNLKDLKIRMPDKLIP 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            +  I +M   I +++    AY  + ++ FD     + YG  S +KI++   G RV  + 
Sbjct: 110 ISEKISEMNLFIDDLVKLEAAYNVDGDVYFDIQKFSDEYGKLSNKKINDLISGNRVEIED 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIF 242
            K NP DF +WK++      ++S +G+GRPGWH EC+ +   Y  G+  DIH GG+DL F
Sbjct: 170 KKNNPLDFSVWKKTEKG-ITFDSNFGKGRPGWHTECALLIDEYFKGETIDIHSGGIDLQF 228

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q       E  ++IW+HNG L + G KMSKS GN +T+   L        ++
Sbjct: 229 PHHENERIQFIAKHGKE-ISDIWVHNGHLTINGEKMSKSLGNTMTLTNFLA-------NY 280

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKGI 346
            + ++R   L T+Y++P++     + +A   +                +K+ +T+     
Sbjct: 281 NSDILRWIFLTTYYKQPLNINDDLIEQANKFIQKINNLSKKIKQLLIENKFVKTNQFDEE 340

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVC 397
           I       + NDLNT   +  L    ++  K   L             N     LG+ + 
Sbjct: 341 IIKQFKIHMKNDLNTSRVLTLLEDTLKDINKLSTLKEFDDLFLKINSLNYILKTLGLSI- 399

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
             ++N  +S   + L      ++  K F  AD IRK L SKG +
Sbjct: 400 --NINTFVSDEEQNLFLLWKKIVSEKDFEKADEIRKVLISKGIL 441


>gi|307330786|ref|ZP_07609922.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces violaceusniger Tu 4113]
 gi|306883589|gb|EFN14639.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces violaceusniger Tu 4113]
          Length = 409

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 131/408 (32%), Positives = 201/408 (49%), Gaps = 33/408 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + + I++T          + P  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLSIHDTATGGR---ITLTPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA++        D  + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAQRN------GDDWTALAERETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE   +I F   S P++GS SR   +  ++ +    
Sbjct: 126 YIGAVESIPGIVPLVERLRDLGAAYELEGDIYFSVESDPSFGSVSRLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  +   EP W+    G GRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGSGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGERPFAKTYVHAGMVALDGEKMSKSKGNLVFVSALRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     IRLA+L  HYR   ++T   L EAE  L +W    +     S   +   +
Sbjct: 304 ----GVDPAAIRLALLAHHYRSDWEWTDGVLREAEERLGRWRAAVSRPDGPSAAALVEEI 359

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI 394
             AL NDL++ +A+ A+ + A   T            +  A   +LG+
Sbjct: 360 REALANDLDSPAALAAVDRWAAAQTATGGTDEGAPGLVSRAVDALLGV 407


>gi|291000007|ref|XP_002682571.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
 gi|284096198|gb|EFC49827.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
          Length = 668

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 156/547 (28%), Positives = 232/547 (42%), Gaps = 119/547 (21%)

Query: 2   KKKIKIYNTLERKITEFQAID-PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
              I++YN+L  +  +F   D  + I  Y CGPTVYD++H+G+AR  + FD++ R+L  Y
Sbjct: 26  DTGIEVYNSLTCQKEKFILQDNSNTITWYTCGPTVYDWSHMGHARTYVGFDIVRRILEDY 85

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +    V Y+ NITDIDDKII++                +       F +D  +L    PT
Sbjct: 86  F-NFNVIYIENITDIDDKIIKK------------NFLSVPRYYEHLFWEDMKQLQVKTPT 132

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFS-------RR 168
              R T HI +++  IQ II +G AYE    + FD  +        YG           R
Sbjct: 133 VLVRVTEHIDEVVSFIQQIIDNGFAYEEGGNVYFDVEAFQQNQKHVYGKLEPWNVNCEER 192

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            +D +       + + KK+  DF LWK S P EP W+S WG+GRPGWHIECSAM+ + L 
Sbjct: 193 LMDGEGESETEKKVFKKKSKKDFALWKTSKPGEPEWDSKWGKGRPGWHIECSAMACYALQ 252

Query: 229 K------------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           +              D+H GG+DL FPHH+NE+AQS       +  N ++H G L+++G 
Sbjct: 253 QAAKLAGRSANDATLDVHCGGIDLKFPHHDNELAQSEAYLGSRQWVNYFLHTGHLSIDGM 312

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTEAE-- 331
            MSKS  NFITI + LE        + A  IR+  L   YR+    ++++   +  A+  
Sbjct: 313 SMSKSKKNFITIRQALE-------KYTARQIRMMFL---YRKFDDEMEYSETTMEYAKSI 362

Query: 332 -----------------------ILLSKWPQTSTSKGII----DPAVLSALYNDLNTVSA 364
                                    + KW Q               V +AL N  +T+  
Sbjct: 363 EKSFQEFFGNLKIIFRDYVTKTGKSIEKWDQADFELSETLSKSKLDVDTALRNSFDTIKC 422

Query: 365 IQALHKLAREST-----KNHDLLPIFNASA-------HILGIEV----------CKEHLN 402
           +  L  L + +      KN+  +P+             + G+              E   
Sbjct: 423 MITLQSLIKATNTYLEKKNYPSVPLLKQVGYYVTRIFSVFGLVDGVDTFGFPVSGGESYE 482

Query: 403 KNISIAIEKLVQERLILL---KMKK-------FSSADYIRKQ-LESKGFILEDYKNPDNG 451
           +N++  I  L   R  +    + K          + D +R   L   G  LED K     
Sbjct: 483 ENVAPIINALSDFRSEIRNIARDKNDKKEQRILQTCDSLRDDVLPGLGIRLEDKK----- 537

Query: 452 QRMTRWK 458
              T WK
Sbjct: 538 -ETTSWK 543


>gi|294660604|ref|NP_853461.2| cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|187608843|sp|Q7NAH7|SYC_MYCGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|284812267|gb|AAP57029.2| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930959|gb|ADC30898.1| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 435

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 151/458 (32%), Positives = 228/458 (49%), Gaps = 50/458 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y+TL +   +   ID + I +YVCGPTVYD  HIGN RP++ FDVL RLL +    K
Sbjct: 1   MKLYDTLTKTNVD---IDANEINIYVCGPTVYDHIHIGNLRPIVTFDVLRRLLEHS--NK 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V N+TDIDDKII +A++      +N +   +T + T  + +    L    P    +
Sbjct: 56  KVNFVHNLTDIDDKIINQAQR------LNLSEEEVTKRYTSAYFEILDELNIKLPKIV-K 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ +  +I  I+ I    +AYE + +I FDT+ I +YG  S+RK+DEQ  G RV    +
Sbjct: 109 VTDVMSGIIKYIEKIYDKQYAYELDGDIYFDTTRIADYGVLSKRKLDEQISGIRVKSNEN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFP 243
           K +P DF+LWK++      W S +G GRPGWH EC+ +       K F IHGGG+DL+FP
Sbjct: 169 KTSPNDFVLWKKTVEG-IKWNSRFGLGRPGWHTECAYIIDQEFKQKGFVIHGGGIDLVFP 227

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHENE AQ+      +   N W+H G+L ++  KMSKS  NFI +  L+E+  +      
Sbjct: 228 HHENENAQNLALHN-KNLVNCWVHVGYLLIDNEKMSKSLNNFIYVKHLIESHNY------ 280

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------SKGIIDP 349
              IR     T + +P++F    +  A+  + K   T                S  ++  
Sbjct: 281 -RAIRWVFYNTAHTQPLNFDGTIIKAAQKDVEKIISTVNRFRTFLIANKNNIPSSSLVCE 339

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKEH 400
               AL+++LN  +A + +  L +   ++     I               I GI     H
Sbjct: 340 EFKKALFDNLNFANATKVIWDLIKVLNESIAYKKIDENIWAYQQLIWCLEIYGIVPDMIH 399

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
             + I       + +   LL  K +  AD IR +L +K
Sbjct: 400 NEQIIDQ-----INQWSELLNNKDYEKADSIRNKLINK 432


>gi|239940119|ref|ZP_04692056.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239986608|ref|ZP_04707272.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291443551|ref|ZP_06582941.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291346498|gb|EFE73402.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 409

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 123/381 (32%), Positives = 193/381 (50%), Gaps = 28/381 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +      + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------VRDGQDWTELAERETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AY+   ++ F   + P++G  S       ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYDLEGDVYFSVDADPHFGEVSGLDAAAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  + P EP W+    G GRPGWHIEC A++  +LG  FDI GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARPGEPSWDGASLGDGRPGWHIECVAIALDHLGMGFDIQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSALRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     IRLA+L  HYR   ++T Q L +A   L++W    +     S   +   V
Sbjct: 304 ----GVDPAAIRLALLSRHYRSDWEWTDQVLADAVERLARWRAAVSRPDGPSADALVEQV 359

Query: 352 LSALYNDLNTVSAIQALHKLA 372
             AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380


>gi|226360027|ref|YP_002777805.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|310947211|sp|C1ASS8|MSHC_RHOOB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|226238512|dbj|BAH48860.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Rhodococcus opacus B4]
          Length = 415

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 121/410 (29%), Positives = 195/410 (47%), Gaps = 37/410 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T +R++            MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 17  PPLRLFDTADRQVRPVTP--GRTATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P   
Sbjct: 74  -HDVHYVQNVTDVDDPLFERANRD------GEDWVVLGMRETALFREDMEALRVLPPRDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
             A   I ++I +++  +  G AY  ++    ++ F   +   +G  S            
Sbjct: 127 IGAVESIGEVIEMVEKFVASGAAYVVDDPEFPDVYFRADATEQFGYESGYDRATMDTFFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K+NP D ++W+ + P EP W SP+G GRPGWHIECSA++ + +G  FD+ 
Sbjct: 187 ERGGDPDRPGKQNPLDALVWRAARPGEPSWPSPFGPGRPGWHIECSAIALNRIGSGFDVQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEYSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDP 349
               G       IRL +L  HYR+   +T Q L +A   L  W   +      S      
Sbjct: 305 ----GEGVDPAAIRLGLLSGHYRQDRPWTEQVLADAHTRLQLWKDAAALESAQSATDTIA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHI 391
            +   L +DL+T  A+ AL   AR        ++    +     +A   +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRALDNGGSDTNAPTEFAAAVDALLGV 410


>gi|111017896|ref|YP_700868.1| cysteinyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|122956108|sp|Q0SIC6|MSHC_RHOSR RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|110817426|gb|ABG92710.1| cysteine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 415

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 119/410 (29%), Positives = 196/410 (47%), Gaps = 37/410 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T +R++            MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 17  PPLRLFDTADRQVRPVTP--GRTATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P   
Sbjct: 74  -HDVHYVQNVTDVDDPLFERANRD------GEDWVVLGMRETALFREDMEALRVLPPRDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
             A   I ++I +++  +  G AY  ++    ++ F  ++   +G  S    +       
Sbjct: 127 IGAVESIGEVIEMVEKFVASGAAYVVDDPEFPDVYFRANATEQFGYESGYDRETMDKFFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K++P D ++W+   P EP W SP+G GRPGWHIECSA++ + +G  FD+ 
Sbjct: 187 ERGGDPDRPGKEDPLDALVWRAVRPGEPSWPSPFGPGRPGWHIECSAIALNRIGSGFDVQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEYSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
               G       IRL +L  HYR+   +T Q L +A   L  W   +  +          
Sbjct: 305 ----GEGVDPAAIRLGLLSGHYRQDRPWTEQLLADAHTRLQLWKDAAALESAPSATDTIA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHI 391
            +   L +DL+T  A+ AL   AR        ++    +     +A   +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRALDHGGSDTNAPSEFAAAVDALLGV 410


>gi|195057996|ref|XP_001995365.1| GH23122 [Drosophila grimshawi]
 gi|193899571|gb|EDV98437.1| GH23122 [Drosophila grimshawi]
          Length = 533

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 141/518 (27%), Positives = 222/518 (42%), Gaps = 85/518 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I+IYN   R        +P  +  Y CGPTVYD  H+G+A   +  D++ R+LR Y+
Sbjct: 23  DTGIQIYNHTVRGKVPLVLRNPHVVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDYF 82

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT   NITD+DDKII+R+R+   +         +      +F  D  RL    P  
Sbjct: 83  KYNLVT-AMNITDVDDKIIKRSRETGRNWL------ELAQAFAAEFKLDMHRLNVKPPNL 135

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +   + +I  +   I+ ++    AY + +N + FD +S  +YG   +      ++    P
Sbjct: 136 RAHVSANIATIQLFIEQLLATQQAYVSQDNSVYFDVASCASYGKLEKL----LQLQESNP 191

Query: 181 EKYHKKNPADFILWKRSTPME------PGWESPWGR-GRPGWHIECSAMSSHYLGKVFDI 233
           +   K+  ADF LWK     E      P WE+ WG  GRPGWHIECSA++  + G+  DI
Sbjct: 192 QSSGKRTAADFALWKAKKEGEAAQQDEPSWEASWGGVGRPGWHIECSAIAGKFFGRQLDI 251

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINEL 291
           H GGLDL FPHHENE AQ C     ++  N W+H G L+L  +  KMSKS GN I++ E+
Sbjct: 252 HAGGLDLRFPHHENEEAQCCAHYETDQWVNYWLHTGQLHLVGDEHKMSKSRGNTISVEEM 311

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-- 349
           L         + A   R+A L+++YR  + +    +  A   L K+              
Sbjct: 312 LT-------KYTADEFRMACLLSNYRNAMPYGDSLMITARQTLRKFKNFHADLSAYMQFQ 364

Query: 350 --------------------AVLSALYNDLNTVSAIQALHKL-------ARESTKNHDL- 381
                                  ++L +D +T  A+  L            E   + +  
Sbjct: 365 KPLKLLDEGALQAQLKHTMLEFDNSLRDDFDTARALAVLMDQMSSISRCINEQQSDAEQE 424

Query: 382 ----LPIFNASAHI-------LGIEVCKEHLNK------NISIAIEKLVQERLILL---- 420
               L +  A+ +         GI    +   +      +I+  I  L+  R  L     
Sbjct: 425 PAYCLDLLLAAGNFIGNAMQNFGITPFDQQQQEQLNPTTDINALIGDLLAVRRQLREKAI 484

Query: 421 -----KMKKF-SSADYIRKQLESKGFILEDYKNPDNGQ 452
                + ++  +  D +R  L+  GF + D+K+  +  
Sbjct: 485 GESVIQNRQMLAVCDQLRDLLQRHGFQVRDHKHGSSWT 522


>gi|331703852|ref|YP_004400539.1| Cysteinyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802407|emb|CBW54562.1| Cysteinyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 441

 Score =  378 bits (971), Expect = e-102,   Method: Composition-based stats.
 Identities = 135/464 (29%), Positives = 214/464 (46%), Gaps = 50/464 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++Y++L +       ++   I +Y CGPTVY++ HIGNARP+++ DVL R L+      
Sbjct: 1   MQLYDSLSKTKKT---LNKKTINLYCCGPTVYNYIHIGNARPVLLVDVLIRYLKSR--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++NITDIDDKII +A   + +         ++ K T  +++D   L    P     
Sbjct: 56  KVNYLQNITDIDDKIILKALDNNLNEL------EVSQKYTNAYLEDLKSLNINQPDKIIL 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
            +  + +MI  I+N++    AY  + ++ F+     N Y   S  K+DE   G RV    
Sbjct: 110 ISQKMNEMIDFIKNLVDINAAYVLDGDVYFNIKKYENEYCKLSGYKLDELISGKRVEIDS 169

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIF 242
            K    DF LWK+ T +   W S +G GRPGWH EC  +   Y   +  DIH GG+DL F
Sbjct: 170 KKHYSLDFSLWKK-TDIGIKWNSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE  Q    +  E  A+IW+HNG L +   KMSKS GN I + + +       +  
Sbjct: 229 PHHENERIQFIAKNNKE-LAHIWLHNGHLQINDEKMSKSLGNVILVRDFI-------KQH 280

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SKGI 346
               +R   L T+Y +P++     + +A     K    S                 +   
Sbjct: 281 NKNTLRWIFLTTNYTQPLNIRDDLIYQANKFFEKLTNLSKKTIQFIIKNDLKIKSINSSE 340

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
                   + +DLNT   +  +  L ++  K+         + L+   +    +LG +  
Sbjct: 341 YINKFNEYMEDDLNTSLVLSLIDSLIKQINKDIVDKNLDNFNLLIGSLDYILDVLGFDNV 400

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
               N       ++L  +   L+K K+F+ AD IR +L  +G +
Sbjct: 401 ---FNYKFDNKTKELFLKWQELVKNKEFNKADIIRNKLIEQGIL 441


>gi|306836112|ref|ZP_07469098.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567962|gb|EFM43541.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 412

 Score =  378 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 121/410 (29%), Positives = 207/410 (50%), Gaps = 32/410 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +Y++  +     Q +      MYVCG T YD  H+G+A   + FD++YR  ++    
Sbjct: 18  QLYLYDSANQTKAPVQ-VKGDTATMYVCGITPYDSTHLGHAATYLTFDLIYR--QFLDAG 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V Y +NITD+DD + ERA ++            + +     F  D   L+ + P H  
Sbjct: 75  KKVNYAQNITDVDDPLFERAERD------GVDWRELGTSQIDLFRSDMELLSVIPPQHFI 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM---- 175
            A   + +++ ++Q ++ +G AY  ++    D      +   +G  S   +++ +     
Sbjct: 129 GAMEAVDEIVDMVQKLLDNGAAYVVDDPEYPDVYASIDATEEFGYESNYSMEQMREFFAE 188

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  KK+P D ++W+     EP W+SP+G GRPGWHIECSA++++YLG  FDI G
Sbjct: 189 RGGDPDRPGKKHPMDALIWRAHREGEPAWKSPFGPGRPGWHIECSAIATNYLGSTFDIQG 248

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHE   A +  A  +++ A  ++H G + L+G KMSKS GN + +++L+E  
Sbjct: 249 GGSDLKFPHHEFSAAHAEAALGVDRMAQFYVHTGMIGLDGVKMSKSLGNLVFVHKLVEQG 308

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
           +          IRL +   HYR   D++ + L +A+  L+ W     + G +  A     
Sbjct: 309 E------DPSAIRLGVFSGHYRAERDWSDEVLDQAKARLATWRTALEAPGSLSAAEGAVA 362

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFN-ASAHILGIEV 396
            +  AL +DL+T +A++A+   A       +     +   A   +LG+  
Sbjct: 363 GLRQALADDLDTPTALRAIDDWAGSDRGEDEEGAAQLVRTALDSLLGVRA 412


>gi|194754415|ref|XP_001959490.1| GF12902 [Drosophila ananassae]
 gi|190620788|gb|EDV36312.1| GF12902 [Drosophila ananassae]
          Length = 559

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 147/514 (28%), Positives = 221/514 (42%), Gaps = 86/514 (16%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            I IYN   R+        P     Y CGPTVYD  H+G+A   +  D+L R+LR Y+  
Sbjct: 48  GINIYNPGMRRKVPLILRSPHMATWYTCGPTVYDETHLGHASTYVKVDILQRILRDYFKI 107

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VT   NITD+DDKII RA  +            +      +F +D  RL    P  + 
Sbjct: 108 NLVT-AMNITDVDDKIIMRASLD------GQDWLQLARDYEAEFRRDMLRLNVKPPDVRS 160

Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
             T+ +P +I  IQ +I   +AY  ++N + FD S    YG  ++  I+E+         
Sbjct: 161 HVTSSMPVIIQFIQELIDDNYAYITSSNSVYFDVSKSKEYGKLAKVTIEEETSSN----- 215

Query: 183 YHKKNPADFILWKRST-PMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
             K+N ADF LWK      EP W++PWG  GRPGWHIECSA++  + G+  D H GGLDL
Sbjct: 216 -EKRNSADFALWKARKTQKEPSWQAPWGGEGRPGWHIECSAIAGLFFGRTVDFHAGGLDL 274

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNG--FLNLEGRKMSKSNGNFITINELLETKKFG 298
            FPHHENE AQ C   + ++  N W+H G   L  + RKMSKS  N I++ ELL      
Sbjct: 275 RFPHHENEEAQCCARYKTDQWVNYWLHTGQLHLTGDQRKMSKSLRNTISVEELL------ 328

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------- 339
            + + A   R+A L+++YR  + ++   +  A   L ++                     
Sbjct: 329 -KKYTADEFRMACLLSNYRNAMYYSDDLMQTARQTLQRFKNFHADLSAYVQFLKPVHLLD 387

Query: 340 ---TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------------NHDL 381
                           ++L +D +T  AI  +       ++                 DL
Sbjct: 388 EGALRAQLAHTMAEFDNSLRDDFDTSRAISVMIDQMSSISRCINEQKVDAQEEPAYCMDL 447

Query: 382 L----PIFNASAHILGI--EVCKEHLNKNI---------SIAIEKLVQERLILL------ 420
           L       N +    G+     KE L   +         SI ++ ++  R  +       
Sbjct: 448 LMAAGNFINRAMLTFGVSELAPKEALEAQVPSTTHKIDSSILVDDVLSVRGRMRQEAFSG 507

Query: 421 KMKK---FSSADYIRKQLESKGFILEDYKNPDNG 451
           + K     ++ D +R  L+  G  + D+K   + 
Sbjct: 508 QQKNSQLLAACDELRTLLQQHGIQVRDHKQGSSW 541


>gi|254385070|ref|ZP_05000404.1| cysteinyl-tRNA synthetase [Streptomyces sp. Mg1]
 gi|194343949|gb|EDX24915.1| cysteinyl-tRNA synthetase [Streptomyces sp. Mg1]
          Length = 409

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 129/408 (31%), Positives = 196/408 (48%), Gaps = 33/408 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +KI++T  +       + P  + R+YVCG T YD  HIG+A     FD++ R+     
Sbjct: 17  RDLKIHDTATQGT---ITLAPGPVARIYVCGITPYDATHIGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +      + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------LRDGQDWTELAERETSLFREDMTALRMLPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE + +I F   S PN+G  S       ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDIYFSVESDPNFGQVSHLDAQAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  + P EP W+    GRGRPGWHIEC A++  +LG  FDI GG
Sbjct: 186 GDPDRAGKKNPLDPMLWMAARPGEPSWDGASLGRGRPGWHIECVAIALDHLGMGFDIQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSALRRA-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAV 351
                     IRLA+L  HYR   ++T + L EA   L +W    +    +        +
Sbjct: 304 ----GVDPAAIRLALLSHHYRADWEWTDEVLAEAVARLERWRAAVSRPDGLPADALVEEI 359

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI 394
             AL NDL+   A+ A+ +       +          +  A   +LG+
Sbjct: 360 REALANDLDAPGALAAVDRWVDAQNASDGDDESAPGLVSRAVDALLGV 407


>gi|195380357|ref|XP_002048937.1| GJ21318 [Drosophila virilis]
 gi|194143734|gb|EDW60130.1| GJ21318 [Drosophila virilis]
          Length = 566

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 143/516 (27%), Positives = 223/516 (43%), Gaps = 85/516 (16%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              I+IYN   R        +P  +  Y CGPTVYD  H+G+A   +  D++ R+LR ++
Sbjct: 57  DTGIRIYNHSVRGKVPLVLRNPQMVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDHF 116

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VT   NITD+DDKII+R+R+   +         +      +F ++ T L    P  
Sbjct: 117 KYNLVT-AMNITDVDDKIIKRSRETGRNWL------ELAHAYDAEFKENMTWLNVKPPNL 169

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           +   + +IP +   I  ++++  AY A +N + FD S   NYG   +   +   +     
Sbjct: 170 RAHVSANIPVIQRFIDQLLVNKQAYVAQDNSVYFDVSKYANYGKLEKISKEAHAVA---- 225

Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            +  K+N ADF LWK      EP W + WG  GRPGWHIECSA++S + G   D H GGL
Sbjct: 226 -EMGKRNAADFALWKAQKEEHEPSWPASWGGAGRPGWHIECSAIASMFFGNKVDFHAGGL 284

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKK 296
           DL FPHHENE AQ C   + ++  N W+H G L+L+G   KMSKS GN +T+ +LL    
Sbjct: 285 DLRFPHHENEEAQCCAHFKTDQWVNYWLHTGQLHLQGEEQKMSKSLGNTVTVEQLL---- 340

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------- 348
              + + A   R+A L+++YR  + ++ Q +  A   L K+                   
Sbjct: 341 ---QKYTADEFRMACLLSNYRNAMQYSDQLMLTARQTLRKFKNFHADLSAYMQFQKPLKL 397

Query: 349 --------------PAVLSALYNDLNTVSAIQALHKLARESTK-----NHDL-------L 382
                             ++L +D +T   I  L       ++       D        L
Sbjct: 398 LDQGALQAQLKHMVQEFDNSLRDDFDTARCIAVLLDQMSSISRCINEQQADAQQDPAHCL 457

Query: 383 PIFNASAHI-------LGI-----------EVCKEHLNKNISIAIEKLVQERLILLKM-- 422
            +  A+ +         GI           +        +I+  I  ++  R  L +   
Sbjct: 458 DLLLAAGNFISVAMLNFGISPLAALKQQQLQPADATARVDINALIADVLAIRCQLREQAV 517

Query: 423 ----KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
               K     +  D +R  L+  GF + D+K   + 
Sbjct: 518 NGNVKNVELLALCDRLRNLLQRHGFSVRDHKKGSSW 553


>gi|169629202|ref|YP_001702851.1| cysteinyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|310947193|sp|B1MPE6|MSHC_MYCA9 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|169241169|emb|CAM62197.1| Cysteinyl-tRNA synthetase (CysS) [Mycobacterium abscessus]
          Length = 412

 Score =  377 bits (968), Expect = e-102,   Method: Composition-based stats.
 Identities = 123/412 (29%), Positives = 197/412 (47%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T +R++            MYVCG T YD  H+G+A   + FD++YR  ++   
Sbjct: 17  PQLRLYDTADRQVRPVTT--GPTATMYVCGITPYDATHLGHAATYLTFDLIYR--QWLDA 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TDIDD + ERA ++            +  + T+ F  D T L  L P   
Sbjct: 73  GLDVHYVQNVTDIDDPLFERADRD------GIDWRELGDRETELFRGDMTALRVLPPREY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
            RAT  I  +I L++ ++  G AY  ++    ++ F   +   +G  S   I+       
Sbjct: 127 VRATESIACIIELVEKMLASGAAYVVDDPEYPDVYFRVDATEQFGYESGYDIETMSRLFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P +  K N  D +LW+ + P EP WE+ +G GRPGWH+ECSA+    LG   DI 
Sbjct: 187 ERGGDPGRPGKANELDALLWRAARPGEPSWEASFGPGRPGWHVECSAIVLRELGAGIDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + ++     
Sbjct: 247 GGGSDLIFPHHEYSAAHAEAVTAQRRFARHYVHAGMIGWDGHKMSKSRGNLVKVS----- 301

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDP 349
                +      +RL +L  HYR    ++   L +A+  L++W          S   +  
Sbjct: 302 -GLTAQGVDPAAVRLGLLAGHYRADRSWSDAVLADAQGRLARWRHAVALSAAPSARDVVA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
            V   L +DL+T +A+ AL     ++     HD      + +A   +LG+++
Sbjct: 361 RVRRYLADDLDTPNALAALDNWVTDALAYGGHDAAAGAQVRDAVDALLGVQL 412


>gi|325120070|emb|CBZ55622.1| hypothetical protein NCLIV_060470 [Neospora caninum Liverpool]
          Length = 671

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 120/321 (37%), Positives = 172/321 (53%), Gaps = 24/321 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N++     EF     + +  Y CGPTVYD +H+G+AR  + FDV+ R++   Y 
Sbjct: 10  TGLMVNNSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YL 68

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              VT   NITDIDDKII+R+      I        +     ++F  D   L    P+  
Sbjct: 69  NYDVTMCMNITDIDDKIIKRS------IEQGVDFLTLARHWEKEFFNDMAALNVRLPSVV 122

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQ---- 173
            R + +IP+++ LI+ I+ +G+ YE+   + FDT +        YG      + ++    
Sbjct: 123 TRVSEYIPEVLSLIERIVKNGYGYESQGSVYFDTQTFRKTDKHIYGRMEPSSVSDESRVL 182

Query: 174 -KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
              G        K++P DF LWK++   EP W+SPWG+GRPGWHIECSAM+   L    D
Sbjct: 183 EGEGELGLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLD 242

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQS  A+   +  N ++H+G L++ G KMSKS  NFITI E L
Sbjct: 243 IHSGGIDLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECL 302

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
                    + A  IRL  LM
Sbjct: 303 SR-------FTARQIRLLCLM 316


>gi|298715268|emb|CBJ27917.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 664

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 159/551 (28%), Positives = 232/551 (42%), Gaps = 118/551 (21%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++NT+   +          ++ Y CGPTVYD AH+G+AR  +  DV+ R+L  Y+    V
Sbjct: 47  VWNTVNGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTDYF-RFDV 105

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           TY   ITD+DDKII RAR+         A   + ++  +QF++D + L    P    R T
Sbjct: 106 TYALGITDVDDKIIARARENGLREWPEVA--EMAAEFERQFLEDMSDLGVRPPDALTRVT 163

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSF----SRRKIDEQKMGTRVPE 181
           +HIP ++  IQ I+ +G  YEA   + FD   +   YG      S     E++ G+   E
Sbjct: 164 DHIPDIVAYIQRILENGMGYEAAGGVYFDVEGMGGAYGKLGVKASSSTTPEEEGGS---E 220

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
              K++  DF LWK +   EP WESP+GRGRPGWHIECSAM+    G   D+H GG+DL 
Sbjct: 221 LRGKRSHKDFALWKTAKADEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGVDLK 280

Query: 242 FPHHENEIAQSCCADRI------------------EKTANIWIHNGFLNLEGRKMSKSNG 283
           FPHH NEIAQ                         +     WIH G LN+EG KMSKS  
Sbjct: 281 FPHHTNEIAQCEAHACGGVAATAAATGDGGVGGERKPWVRHWIHTGHLNIEGLKMSKSLK 340

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           NF+TI E LE     G+   A   R+  LM  Y   + F+  R+ EA ++  +  +    
Sbjct: 341 NFVTIREYLEGHS-AGQEAAAEDFRMFCLMHKYSSNVTFSEDRMEEASVVRGRLQRFLAL 399

Query: 344 KGIIDPAVLS------------------------------ALYNDLNTVSAIQALHKL-- 371
             +   A                                 AL +D +T  A++ L  L  
Sbjct: 400 ADVTIGAARKNRPADTAVRWGKKEKWLVEETSTCRREVRLALSDDFDTPRAVRHLASLCA 459

Query: 372 -----ARESTKNHDLLPIFNA------SAHILGI----------------------EVCK 398
                 +E T+  DL P+ +A      +  +LG+                      E   
Sbjct: 460 LISPHLKELTQG-DLGPVVSARNFAAETLALLGVGESSTGAAAAGGGLGEMKGGGGERGG 518

Query: 399 EHLNKNIS---IAIEKLVQERLILLK---MKKFSS---------------ADYIRKQ-LE 436
              N  +      ++ +V+ R +  K    +                    D+ R + L 
Sbjct: 519 LVGNDGLPPAREVVDAMVEFRRMARKHVLERNLKKNPVSGKLMKRDLLQLIDHTRDETLP 578

Query: 437 SKGFILEDYKN 447
           S G  + D  +
Sbjct: 579 SLGVHVHDEPD 589


>gi|226306683|ref|YP_002766643.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Rhodococcus erythropolis PR4]
 gi|310947210|sp|C0ZZW9|MSHC_RHOE4 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|226185800|dbj|BAH33904.1| probable cysteine--1D-myo-inosityl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC
           [Rhodococcus erythropolis PR4]
          Length = 413

 Score =  374 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 122/412 (29%), Positives = 199/412 (48%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T +R++            MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 17  PPLRLYDTADRQVRPVTP--GKKATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P   
Sbjct: 74  -HDVHYVQNVTDVDDPLFERANRD------GEDWIVLGIRETALFREDMEALRVLPPKDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
             A   + +++ L++  +  G AY  ++    ++ F   +   +G  S       +    
Sbjct: 127 IGAVESVNEVVELVEKFVASGAAYIVDDAEFPDVYFRADATEQFGYESGYDRATMEKFFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K+NP D ++W+   P EP W SP+G GRPGWHIEC+A++ + +G  FD+ 
Sbjct: 187 ERGGDPDRVGKRNPLDALVWRAERPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDVQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEFSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
               G       IRL +L  HYR+   +T Q L +A+  L  W + +             
Sbjct: 305 ----GEGVDPAAIRLGLLSGHYRQDRAWTDQVLEDAQSRLKVWREAAALDSAPSATDTVA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLARES-----TKNHDLLPIFNASAHILGIEV 396
            +   L +DL+T  A+ AL   AR +     +         +A   +LGI +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRAIEGGGSDTQAPGEFADAVDALLGISL 412


>gi|21220159|ref|NP_625938.1| cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256788729|ref|ZP_05527160.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289772623|ref|ZP_06532001.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces lividans TK24]
 gi|61216726|sp|Q9ADA4|MSHC_STRCO RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|13620189|emb|CAC36366.1| putative cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289702822|gb|EFD70251.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces lividans TK24]
          Length = 409

 Score =  374 bits (962), Expect = e-101,   Method: Composition-based stats.
 Identities = 124/408 (30%), Positives = 202/408 (49%), Gaps = 33/408 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGP---VTLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +      + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------VRDGVDWTALAEQETALFREDMTALRMLPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE   ++ F   + P++G  S       ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDVYFSVEADPHFGGVSHLDAATMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGGTLGRGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVGLDGEKMSKSKGNLVFVSQLRR--- 302

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAV 351
                     IRL +L  HYR   ++T Q L +A   L +W    +         +   +
Sbjct: 303 ---EGVDPAAIRLTLLAHHYRSDWEWTDQVLQDALARLDRWRAAVSRPDGPPAEALVEEI 359

Query: 352 LSALYNDLNTVSAIQALHKLA--RESTKNHDLLP---IFNASAHILGI 394
             AL NDL++ +A+ A+ + A  ++ +   D+     +  A   +LG+
Sbjct: 360 REALANDLDSPAALAAVDRWAALQQESGGTDIGAPGVVSRAVDALLGV 407


>gi|15609267|ref|NP_216646.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|31793310|ref|NP_855803.1| cysteinyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121638012|ref|YP_978236.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148661945|ref|YP_001283468.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148823340|ref|YP_001288094.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|167967870|ref|ZP_02550147.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|215403514|ref|ZP_03415695.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215411843|ref|ZP_03420627.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215427508|ref|ZP_03425427.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215431057|ref|ZP_03428976.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215446356|ref|ZP_03433108.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218753852|ref|ZP_03532648.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219558106|ref|ZP_03537182.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224990506|ref|YP_002645193.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253798807|ref|YP_003031808.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232288|ref|ZP_04925615.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis C]
 gi|254364936|ref|ZP_04980982.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551164|ref|ZP_05141611.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260187126|ref|ZP_05764600.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260201240|ref|ZP_05768731.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260205422|ref|ZP_05772913.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289443634|ref|ZP_06433378.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Mycobacterium tuberculosis T46]
 gi|289447756|ref|ZP_06437500.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289554084|ref|ZP_06443294.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           605]
 gi|289570243|ref|ZP_06450470.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T17]
 gi|289574811|ref|ZP_06455038.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis K85]
 gi|289745403|ref|ZP_06504781.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           02_1987]
 gi|289750724|ref|ZP_06510102.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T92]
 gi|289754239|ref|ZP_06513617.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289758250|ref|ZP_06517628.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T85]
 gi|289762291|ref|ZP_06521669.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis GM
           1503]
 gi|294993134|ref|ZP_06798825.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297634716|ref|ZP_06952496.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297731705|ref|ZP_06960823.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298525625|ref|ZP_07013034.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306776378|ref|ZP_07414715.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu001]
 gi|306780156|ref|ZP_07418493.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu002]
 gi|306784900|ref|ZP_07423222.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu003]
 gi|306789267|ref|ZP_07427589.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu004]
 gi|306793596|ref|ZP_07431898.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu005]
 gi|306797986|ref|ZP_07436288.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu006]
 gi|306803865|ref|ZP_07440533.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu008]
 gi|306808437|ref|ZP_07445105.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu007]
 gi|306968261|ref|ZP_07480922.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu009]
 gi|306972490|ref|ZP_07485151.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080200|ref|ZP_07489370.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu011]
 gi|307084779|ref|ZP_07493892.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu012]
 gi|313659040|ref|ZP_07815920.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|54039653|sp|P67018|MSHC_MYCBO RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|54042274|sp|P67017|MSHC_MYCTU RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947194|sp|A1KKH3|MSHC_MYCBP RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947195|sp|C1AQ46|MSHC_MYCBT RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947201|sp|A5U4F6|MSHC_MYCTA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947202|sp|A5WPA3|MSHC_MYCTF RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947203|sp|C6DPT0|MSHC_MYCTK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|3261823|emb|CAB10724.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium
           tuberculosis H37Rv]
 gi|31618902|emb|CAD97007.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium bovis
           AF2122/97]
 gi|121493660|emb|CAL72135.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124601347|gb|EAY60357.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis C]
 gi|134150450|gb|EBA42495.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506097|gb|ABQ73906.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|148721867|gb|ABR06492.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis F11]
 gi|224773619|dbj|BAH26425.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253320310|gb|ACT24913.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           1435]
 gi|289416553|gb|EFD13793.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Mycobacterium tuberculosis T46]
 gi|289420714|gb|EFD17915.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           CPHL_A]
 gi|289438716|gb|EFD21209.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           605]
 gi|289539242|gb|EFD43820.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis K85]
 gi|289543997|gb|EFD47645.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T17]
 gi|289685931|gb|EFD53419.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           02_1987]
 gi|289691311|gb|EFD58740.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T92]
 gi|289694826|gb|EFD62255.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|289709797|gb|EFD73813.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis GM
           1503]
 gi|289713814|gb|EFD77826.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T85]
 gi|298495419|gb|EFI30713.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308215167|gb|EFO74566.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326927|gb|EFP15778.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu002]
 gi|308330361|gb|EFP19212.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu003]
 gi|308334196|gb|EFP23047.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337992|gb|EFP26843.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu005]
 gi|308341678|gb|EFP30529.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu006]
 gi|308345168|gb|EFP34019.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu007]
 gi|308349474|gb|EFP38325.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu008]
 gi|308354105|gb|EFP42956.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu009]
 gi|308358045|gb|EFP46896.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361985|gb|EFP50836.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu011]
 gi|308365646|gb|EFP54497.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           SUMu012]
 gi|323719283|gb|EGB28425.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326903745|gb|EGE50678.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
           W-148]
 gi|328458569|gb|AEB03992.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
           4207]
          Length = 414

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 125/414 (30%), Positives = 195/414 (47%), Gaps = 36/414 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y++ +R++        S   MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 17  PQLRLYDSADRQVRPVAP--GSKATMYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGH 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  + YV+NITDIDD + ERA ++            +       F +D   L  L P   
Sbjct: 75  E--LHYVQNITDIDDPLFERADRD------GVDWRDLAQAEVALFCEDMAALRVLPPQDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN------EIIFDTSSIPNYGSFSRRKIDEQ--- 173
             AT  I +M+ LI+ ++  G AY  +       +I F   +   +G  S    D     
Sbjct: 127 VGATEAIAEMVELIEKMLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRL 186

Query: 174 -KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            +     P +  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   D
Sbjct: 187 CEERGGDPRRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLD 246

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ L 
Sbjct: 247 IQGGGSDLIFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALR 306

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----II 347
                  +      +RL +L  HYR    ++ Q L EA   L +W   +          +
Sbjct: 307 ------AQDVEPSAVRLGLLAGHYRADRFWSQQVLDEATARLHRWRTATALPAGPAAVDV 360

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
              V   L +DL+T  AI AL     ++ +   HD      +  A   +LG+++
Sbjct: 361 VARVRRYLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL 414


>gi|229494883|ref|ZP_04388636.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rhodococcus erythropolis SK121]
 gi|229318241|gb|EEN84109.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rhodococcus erythropolis SK121]
          Length = 413

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 123/412 (29%), Positives = 200/412 (48%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T +R++            MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 17  PPLRLYDTADRQVRPVTP--GEKATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P   
Sbjct: 74  -HDVHYVQNVTDVDDPLFERANRD------GEDWIVLGMRETALFREDMEALRVLPPKDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
             A   + +++ L++  +  G AY  ++    ++ F   +   +G  S       +    
Sbjct: 127 IGAVESVNEVVELVEKFVASGAAYIVDDAEFPDVYFRADATEQFGYESGYDRATMEKFFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K+NP D ++W+   P EP W SP+G GRPGWHIEC+A++ + +G  FD+ 
Sbjct: 187 ERGGDPDRVGKRNPLDALVWRAERPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDVQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEFSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDP 349
               G       IRL +L  HYR+   +T Q L +A+  L  W + +      S      
Sbjct: 305 ----GEGVDPAAIRLGLLSGHYRQDRAWTDQVLADAQSRLKVWREAAALGSAPSATDTVA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLARES-----TKNHDLLPIFNASAHILGIEV 396
            +   L +DL+T  A+ AL   AR +     +         +A   +LGI +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRAIEGGGSDTQAPGEFADAVDALLGISL 412


>gi|333028184|ref|ZP_08456248.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
 gi|332748036|gb|EGJ78477.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
          Length = 409

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 122/380 (32%), Positives = 189/380 (49%), Gaps = 26/380 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T                R+YVCG T YD  H+G+A     FD++ R+      
Sbjct: 17  RDLRIHDTATNGPVTLTP--GEVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LDS 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V YV+N+TD+DD ++ERA      +   +  + +  + T  F +D T L  L P H 
Sbjct: 73  GRQVHYVQNVTDVDDPLLERA------VRDGEDWTGLAERETALFREDMTALRMLPPRHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP ++ L++ +   G AYE   +I F  +S  ++G  S    +  ++ +     
Sbjct: 127 IGAVEAIPGIVPLVERLCAMGAAYELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            PE+  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L +    
Sbjct: 247 SDLAFPHHEMGASHAQVLTGEHPFARSYVHAGMVGLDGEKMSKSKGNLVFVSRLRKD--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVL 352
                    IRLA+L  HYR   ++T + L EA   L++W    +     S   +   V 
Sbjct: 304 ---GVDPAAIRLALLAHHYRADWEWTAEGLQEAVDRLARWRAAVSRPDGPSAEALVEEVR 360

Query: 353 SALYNDLNTVSAIQALHKLA 372
            AL +DL++  A+ A  + A
Sbjct: 361 DALADDLDSPRALLAFDRWA 380


>gi|312139693|ref|YP_004007029.1| mycothiol ligase mshc [Rhodococcus equi 103S]
 gi|325676858|ref|ZP_08156531.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|311889032|emb|CBH48345.1| mycothiol ligase MshC [Rhodococcus equi 103S]
 gi|325552406|gb|EGD22095.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 413

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 127/412 (30%), Positives = 203/412 (49%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T +R++        +  +MYVCG T YD  H+G+A   + FD++ R+LR    
Sbjct: 17  PALRLYDTADRQVRPVTP--GATAKMYVCGITPYDATHLGHAATYLTFDLVNRVLRDAG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++       +   ++  + T  F +D   L  L P   
Sbjct: 74  -HAVHYVQNVTDVDDPLFERADRD------GEDWVVLGMRETALFREDMEALRVLPPQDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSR--RKIDEQKMG 176
             A   I +++ L++  +  G AY  ++    D      +   +G  S   R   +    
Sbjct: 127 IGAVESIGEVVELVEKFVASGAAYVVDDPEYPDVYFRADATAQFGYESGYDRATMDHFFA 186

Query: 177 TR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            R   P +  K++P D ++W+   P EP W SP+G GRPGWHIEC+A++ + +G  FDI 
Sbjct: 187 ERGGDPNRPGKRDPLDALVWRAQRPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +  A   ++ A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEFSAAHAESATGTDRFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
               G       IRL +L  HYR    +T Q L +A+  L+ W + +  +         A
Sbjct: 305 ----GEGVDPAAIRLGLLSGHYRVDRPWTDQVLADAQERLALWRKAAALESAPSAEDTVA 360

Query: 355 -----LYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIEV 396
                L +DL+T  A+ AL   AR +               +A   +LG+E+
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRAVDHGGPDAGAPGAFADAVDALLGVEL 412


>gi|295839782|ref|ZP_06826715.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB74]
 gi|197697718|gb|EDY44651.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB74]
          Length = 409

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 121/380 (31%), Positives = 190/380 (50%), Gaps = 26/380 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T                R+YVCG T YD  H+G+A     FD++ R+      
Sbjct: 17  RDLRIHDTATDGPVTLTP--GEVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LDS 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V YV+N+TD+DD ++ERA      +   +  + +  + T  F +D T L  L P H 
Sbjct: 73  GRQVHYVQNVTDVDDPLLERA------VRDGEDWTGLAERETALFREDMTALRMLPPRHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP ++ L++ +   G AYE   +I F  +S  ++G  S    +  ++ +     
Sbjct: 127 IGAVEAIPGIVPLVERLRERGAAYELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            PE+  KKNP D +LW  +   EP W+    G GRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPERPGKKNPLDPMLWMAAREGEPSWDGGSLGDGRPGWHIECVAIALDHLGMAFDVQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L +    
Sbjct: 247 SDLAFPHHEMGASHAQVLTGEHPFARSYVHAGMVGLDGEKMSKSRGNLVFVSQLRKD--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVL 352
                    IRLA+L  HYR   ++T + L EA   L++W         T    +   V 
Sbjct: 304 ---GVDPAAIRLALLAHHYRADWEWTAEGLQEAVDRLARWRAAVSRPDGTPAETLVEEVR 360

Query: 353 SALYNDLNTVSAIQALHKLA 372
            AL +DL++  A++A+ + A
Sbjct: 361 DALADDLDSPRALRAIDRWA 380


>gi|269126521|ref|YP_003299891.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermomonospora curvata DSM 43183]
 gi|310947225|sp|D1A2Q5|MSHC_THECD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|268311479|gb|ACY97853.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermomonospora curvata DSM 43183]
          Length = 414

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 126/406 (31%), Positives = 193/406 (47%), Gaps = 34/406 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +++T    +   +       RMYVCG T YD  H+G+A   + FD++ R+ R   G 
Sbjct: 23  PLHLHDTATGTVRPTRP--GPTARMYVCGITPYDATHLGHAATYLAFDLVNRVWRD--GG 78

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD ++ERA Q             +  +    F  D T L  L P H  
Sbjct: 79  HKVCYVQNVTDVDDPLLERAEQ------TGQDWRELADREIALFRDDMTALRILPPDHYV 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRV 179
            A   IP ++ +I+ +   G  YE N ++ F  S+ P++G  S    ++           
Sbjct: 133 GAVEAIPLIVEMIERLRSRGAVYEVNGDLYFPISADPDFGRVSGLTTEQMLPLFAERGGD 192

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P++  KK+P D +LW+   P EP WESP+G GRPGWH+ECSA+S H+LG  FD+ GGG D
Sbjct: 193 PQRRGKKDPLDALLWRAQRPGEPSWESPFGPGRPGWHVECSAISIHHLGMAFDVEGGGSD 252

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHE   + +  A      A  ++H G + L+G+KMSKS GN + ++ L        
Sbjct: 253 LAFPHHEMSASHAQVATGRHPHAKAYVHTGMVGLDGQKMSKSLGNLVFVSRLRAD----- 307

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSA 354
                  +RLA+L  HYR   ++T + L  A   L +W              +   V   
Sbjct: 308 -GADPMAVRLALLAHHYRSDWEWTGEDLPRATARLERWRAAVQLPAGPPAAAVAAEVRRH 366

Query: 355 LYNDLNTVSAIQALHKLA---------RESTKNHDLLPIFNASAHI 391
           L  DL+  SA+  + + A         R+      +  + +A   +
Sbjct: 367 LSQDLDAPSALVTVDRWAEQALAGAGERDPAAPAQVRAVVDALLGV 412


>gi|72162231|ref|YP_289888.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
 gi|123733517|sp|Q47NV4|MSHC_THEFY RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|71915963|gb|AAZ55865.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
          Length = 412

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/409 (32%), Positives = 203/409 (49%), Gaps = 30/409 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +++T+            +  RMYVCG T YD AH+G+A   + FD++ R+ R     
Sbjct: 20  PLSVHDTVTGSRRTITP--GATARMYVCGITPYDAAHLGHAFTYLTFDLVNRVWRDAG-- 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITDIDD ++ERA               + ++  Q F +D   L  L P    
Sbjct: 76  HTVDYVQNITDIDDPLLERAAA------TGQDWQELAAREIQVFREDMAALRILPPRAFL 129

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK----IDEQKMGTRV 179
                +  +   +  +   G  YE + +I F  +  P +GS S+      ++        
Sbjct: 130 GVVESMDLIADFVARLRAQGVTYEVDGDIYFSAADAPGFGSLSQLDRTAMLELFAERGGD 189

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P +  KK+P D++LW+   P EP W++P GRGRPGWH+ECSA+S H LG  FD++GGG D
Sbjct: 190 PGRAGKKDPLDWLLWRAERPGEPAWDTPLGRGRPGWHVECSAISVHELGMGFDLNGGGDD 249

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHE   A++CCA      A  ++H   + L+G KMSKS GN + +++L +      
Sbjct: 250 LIFPHHEMGAAEACCATGSRPQARHYLHVAMVGLDGEKMSKSRGNLVFVSQLRKAGT--- 306

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA 354
                  IRLA+L  HYR   ++T   L  AE  L +W   +  +   D       V SA
Sbjct: 307 ---DPMAIRLALLAHHYRTAWEWTDADLRTAEQRLERWRAAAAVENAPDARPLLARVRSA 363

Query: 355 LYNDLNTVSAIQALHKLARESTK----NHDLLPIFNASAH-ILGIEVCK 398
           L +DL+T +A+ A+ + A  +      + D   +   +   +LG+ + +
Sbjct: 364 LADDLDTATALAAVDEWADAALSGSGDDPDAPALMRTTVDTLLGVALDR 412


>gi|167465001|ref|ZP_02330090.1| cysteinyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 317

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 121/333 (36%), Positives = 165/333 (49%), Gaps = 47/333 (14%)

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
             +YG  S + +DE + G R+     K+NP DF+LWK + P E  W SPWG GRPGWHIE
Sbjct: 1   FADYGKLSHQNLDELQYGIRIEVDERKENPQDFVLWKAAKPGEVYWSSPWGNGRPGWHIE 60

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           CSA+   YLG+  DIHGGG+DL FPHHE EIAQ+      +  A  W+HN FLN++  KM
Sbjct: 61  CSALVHKYLGETIDIHGGGVDLTFPHHECEIAQTEALTC-KPMAKYWLHNAFLNIDNEKM 119

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN + + E+L+  K         V+RL M+M HYR  I+F    L +A   L +  
Sbjct: 120 SKSLGNGVLVREILKRVK-------PQVLRLFMMMAHYRNQINFNSDGLEQAANGLERIM 172

Query: 339 QTSTSKG--------------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
            + T+                       I     + + +D NT  AI A+ +L  E+   
Sbjct: 173 NSVTNLKHRLKIAQEGPADEQVKNRIQAIKAQFEAKMNDDFNTPDAITAVFELVSEANNT 232

Query: 379 HD-----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
                        LL  F +   +LGI   +E     +   IEKL+ ER    + K ++ 
Sbjct: 233 LKEERVNVSTLEMLLDQFKSFDTVLGILEPEE--TDLMDEEIEKLIAERTEARRAKNWAR 290

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           AD IR  L  KG +LED        +  RW+QK
Sbjct: 291 ADEIRDILTEKGILLEDT------PQGIRWRQK 317


>gi|194246729|ref|YP_002004368.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807086|emb|CAP18522.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 438

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 144/458 (31%), Positives = 210/458 (45%), Gaps = 42/458 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNTL RK   F+ +  + I MYVCGPTVYD  H+GNARP+I F++L + L+    + 
Sbjct: 2   LKIYNTLTRKKEIFKPLYSNIINMYVCGPTVYDNIHLGNARPLIFFNMLKKYLQNLNFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y  N            +    +I        I++K    F+    +L      + P+
Sbjct: 61  -VNYAVN------ITDIDDKIIKIAIEQKTTEKFISTKYINCFLNILKQLEIENIDYFPQ 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            T+ IP +I  I+ +I  G+AY  +  + F    I NYG    + I++ K   R      
Sbjct: 114 VTDFIPSIISYIEKLIFKGYAYINDQGVYFRVGLISNYGQLGSKIIEDLKKNNRKEFDSQ 173

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+N  DFILWK++      ++SPW  GRPGWH EC  M         DIHGGG DL FPH
Sbjct: 174 KENHQDFILWKKTKFG-IKYQSPWFEGRPGWHTECVVMIKKIFNVTLDIHGGGNDLKFPH 232

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE+AQS   D     +N +IH G ++ +  KMSKS GN I + +LL       + +  
Sbjct: 233 HENELAQSIAYDGNN-LSNFFIHIGRIDYQQVKMSKSLGNVIWVKDLL-------KKFHP 284

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------DP 349
            VI+L +L  +YR+PI+F    + +      K          I                 
Sbjct: 285 NVIKLLILSHYYRQPINFHDSLMEQFVAKYEKINNLLQKNNFILKINNIFSNQLEISMIK 344

Query: 350 AVLSALYNDLNTVSAIQALHKLAR--ESTKNHDLLP----IFNASAHILGIEVCKEHLNK 403
                + +DLNT + +  + K  +      N D L           +ILGI++      K
Sbjct: 345 EFYEYMNDDLNTPNVVSLIEKGLKIFHQNINFDRLSQIQNTLIFILNILGIKIFL----K 400

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
            ++  I ++        K + F  +DY RK L   GFI
Sbjct: 401 PVTKEIIEIYHLWQKEFKCRNFEKSDYYRKILIDLGFI 438


>gi|325179782|emb|CCA14185.1| cysteinyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 703

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 154/564 (27%), Positives = 214/564 (37%), Gaps = 128/564 (22%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+YN+L R    F  I    +  Y+CGPTVYD  H+G+ R    FD   R+L  Y+G 
Sbjct: 34  PLKLYNSLTRTKNHFIPIHGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYARRILEDYFGY 93

Query: 64  KCVTYVRNIT----------------------DIDDKIIERARQEHPSIPINDAIS---- 97
           + V  V NIT                      D+     +R R+         A      
Sbjct: 94  E-VELVMNITDIDDKIIIRAAENGWKQANPGEDLPTNTEQRVRKVMEWASEQSAEENMKR 152

Query: 98  --IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              ++      F+ D   L    PT   R + ++  +I L+Q II +G AYE+N  + FD
Sbjct: 153 TKDLSQFWEASFLHDMASLGIKIPTVITRVSEYVDDIILLVQGIINNGFAYESNGSVYFD 212

Query: 156 TSSIPN-----YGSF-----SRRKIDEQKMGTRVPE-----KYHKKNPADFILWKRSTPM 200
           T++        YG        +  +  +  G+            K+  +DF+LWK+S   
Sbjct: 213 TNTFSQSSGKAYGKLLPENIGQSDLLAEGEGSLAANPTLLGNSDKRGASDFVLWKKSKNG 272

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLG----KVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           EP W SPWG GRPGWHIECSAM+S  L        DIH GG+DL FPHH+NEIAQS    
Sbjct: 273 EPFWVSPWGPGRPGWHIECSAMASSTLQRFADGQIDIHSGGIDLRFPHHDNEIAQSEAYF 332

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
              +  N ++H G LN+EG KMSKS  NF+ I + L           +  +R   L+  Y
Sbjct: 333 NFSQWINYFLHTGHLNIEGLKMSKSLKNFVKIKDALMDH-------SSRQLRFLFLLHKY 385

Query: 317 REPIDFTVQRLTEAE----------------------ILLSKWPQTSTSKGII----DPA 350
             P+D+    + EA                           +W Q               
Sbjct: 386 NVPMDYNDHSVEEAVVVDRFFNEFFQNVKVQLRLLGMTNAQRWEQRDIQLHDAIVACKEN 445

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN--------------HDLLPIFNASAHILGIEV 396
           V  AL NDLNT  AI  L +LA+E ++                       +   I G+  
Sbjct: 446 VHQALANDLNTPQAILHLQQLAKEVSRYMASSQEHNKVSLLIRSAAEYVTSIFRIFGLIQ 505

Query: 397 -----------CKEHLNKNISIAI---------EKLVQERLILL------------KMKK 424
                        E         I         E   + R +                K 
Sbjct: 506 GGSDIGFPLTNSSEEGAAVNEETILTPVLDIFSEFRDEIRELARAGTTGEIDGKALAAKI 565

Query: 425 FSSADYIRKQ-LESKGFILEDYKN 447
               D +R + L   G  LED  N
Sbjct: 566 LHVCDSVRDEKLPHAGIRLEDRAN 589


>gi|296269905|ref|YP_003652537.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermobispora bispora DSM 43833]
 gi|310947224|sp|D6Y1N8|MSHC_THEBD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296092692|gb|ADG88644.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Thermobispora bispora DSM 43833]
          Length = 403

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 126/401 (31%), Positives = 192/401 (47%), Gaps = 27/401 (6%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T  R++ E +       RMYVCG T YD  H+G+A   + FD++ R  R     
Sbjct: 18  PLRLYDTATREVRETEP--SGKARMYVCGITPYDATHLGHANTYLAFDLVNRAWRDAG-- 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V Y +N TD+DD ++ERA+       I      +  +  + F  D   L  L P    
Sbjct: 74  HDVHYTQNTTDVDDPLLERAQA------IGVDWRELADREIELFRTDMEALRILPPRDYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRV 179
             T  I  +  +I  ++  G  Y   +++ F  ++ P +G+ S    +  +         
Sbjct: 128 AVTEVIDDIAEVIVRLMERGATYRIGDDVYFSVAAAPKFGAISGYDEETMRRLFAERGGD 187

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P +  K+NP D++LW+   P EP WESP+GRGRPGWH+EC+A++  +LG  FD+ GGG D
Sbjct: 188 PGRAGKRNPLDWLLWRGERPGEPSWESPFGRGRPGWHVECTAIALRHLGPGFDVSGGGSD 247

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHE    +   A      A  ++H G +  EG KMSKS GN + ++EL        
Sbjct: 248 LIFPHHEMGACEGHVATGEWPFARAYVHAGMVAYEGEKMSKSRGNLVFVSELR------- 300

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSA 354
                  IRLA+L  HYR   ++T  RLTEAE  L++W          D A     V   
Sbjct: 301 HEADPMAIRLALLARHYRSDWEWTPDRLTEAEARLARWRAAVARPAGPDGAALLARVRER 360

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-AHILGI 394
           + +DL+   A+  +   A     +     +       +LG+
Sbjct: 361 IADDLDAPGALALIDAWAAADGDDASAPGLVRDMVDALLGV 401


>gi|227503624|ref|ZP_03933673.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
 gi|227075660|gb|EEI13623.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
          Length = 412

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 120/410 (29%), Positives = 207/410 (50%), Gaps = 32/410 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +Y++  +     Q +      MYVCG T YD  H+G+A   + FD++YR  ++    
Sbjct: 18  QLYLYDSANQTKAPVQ-VKGDTATMYVCGITPYDSTHLGHAATYLTFDLIYR--QFLDAG 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V Y +NITD+DD + ERA ++            + +     F  D   L+ + P H  
Sbjct: 75  KKVNYAQNITDVDDPLFERAERD------GVDWRELGTSQIDLFRSDMELLSVIPPQHFI 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM---- 175
            A   + +++ ++Q ++ +G AY  ++    D      +   +G  S   +++ +     
Sbjct: 129 GAMEAVDEIVDMVQKLLDNGAAYVVDDPEYPDVYASIDATEEFGYESNYSMEQMREFFAE 188

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  KK+P D ++W+     EP W+SP+G GRPGWHIECSA++++YLG  FDI G
Sbjct: 189 RGGDPDRPGKKHPMDALIWRAHREGEPAWKSPFGSGRPGWHIECSAIATNYLGSTFDIQG 248

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHE   A +  A  +++ A  +++ G + L+G KMSKS GN + +++L+E  
Sbjct: 249 GGSDLKFPHHEFSAAHAEAALGVDRMAQFYVYTGMIGLDGVKMSKSLGNLVFVHKLVEQG 308

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
           +          IRL +   HYR   D++ + L +A+  L+ W     + G +  A     
Sbjct: 309 E------DPSAIRLGVFSGHYRAERDWSDEVLDQAKARLATWRTALEAPGALSAAEDAVA 362

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFN-ASAHILGIEV 396
            +  AL +DL+T +A++A+   A       +     +   A   +LG+  
Sbjct: 363 GLRQALADDLDTPAALRAIDNWAGSDRGEDEEGAAQLVRTALDSLLGVRA 412


>gi|302518136|ref|ZP_07270478.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB78]
 gi|318059123|ref|ZP_07977846.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actG]
 gi|318078551|ref|ZP_07985883.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actF]
 gi|302427031|gb|EFK98846.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. SPB78]
          Length = 409

 Score =  373 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 122/380 (32%), Positives = 189/380 (49%), Gaps = 26/380 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T                R+YVCG T YD  H+G+A     FD++ R+      
Sbjct: 17  RDLRIHDTATDGPVTLTP--GEVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LDS 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V YV+N+TD+DD ++ERA      +   +  + +  + T  F +D T L  L P H 
Sbjct: 73  GRQVHYVQNVTDVDDPLLERA------VRDGEDWTGLAERETALFREDMTALRMLPPRHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP ++ L++ +   G AYE   +I F  +S  ++G  S    +  ++ +     
Sbjct: 127 IGAVEAIPGIVPLVERLCAMGAAYELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            PE+  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L +    
Sbjct: 247 SDLAFPHHEMGASHAQVLTGEHPFARSYVHAGMVGLDGEKMSKSKGNLVFVSRLRKD--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVL 352
                    IRLA+L  HYR   ++T + L EA   L++W    +     S   +   V 
Sbjct: 304 ---GVDPAAIRLALLAHHYRADWEWTAEGLQEAVDRLARWRAAVSRPDGPSAEALVEEVR 360

Query: 353 SALYNDLNTVSAIQALHKLA 372
            AL +DL++  A+ A  + A
Sbjct: 361 DALADDLDSPRALLAFDRWA 380


>gi|188524105|ref|ZP_03004185.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195867746|ref|ZP_03079747.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198273408|ref|ZP_03205944.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|195660058|gb|EDX53438.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195660601|gb|EDX53857.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|198249928|gb|EDY74708.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
          Length = 436

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 148/462 (32%), Positives = 226/462 (48%), Gaps = 51/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   K+ E   I    I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +  E 
Sbjct: 1   MKLYDSYSNKLVE---ISDKLISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKHNIE- 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV NITDIDDKII  A   +           ++     +++K    L  L     P+
Sbjct: 57  -TKYVLNITDIDDKIINYALANNLKEL------EVSEYYFNEYLKIKKALNTLE-MINPK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R+    +
Sbjct: 109 VSTHMDKIINYIQKLIDKQAGYFVGDDVYFDTKKALNYGQLSKRDLENDIVGMRIENVVN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DFILWK++      W +PWG GRPGWH ECS + + Y+G+   IHGGG+DL FPH
Sbjct: 169 KRNPNDFILWKKTNKG-IMWNTPWGIGRPGWHSECSCLINAYIGEQVSIHGGGIDLKFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL         +  
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNVNNEKMSKSLNNFILVKDLLA-------QYDY 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
            V+R       Y++PI F+ + + + E  + K   T  +                     
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEIFKIKNTIYNAKNYLYFNHELKSLVPIDHFK 339

Query: 350 AVLSALYNDLNTVSAIQALH-------KLARESTKNHDL---LPIFNASAHILGIEVCKE 399
                + +DL+ V  +  +H        L +E+   ++L   L        ILGIE    
Sbjct: 340 PFDELINDDLDFVGIVDLIHISVKKINTLIKENKNINELKLNLVQLLYMLDILGIEFIDL 399

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H ++N+      L+      +  K ++ AD +RK+L + G +
Sbjct: 400 HNDENL-----ALLNAWKNYVDKKDYTKADELRKELINIGIL 436


>gi|310947220|sp|D7BSS4|MSHC_STRBB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|297161859|gb|ADI11571.1| cysteinyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
          Length = 409

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 132/408 (32%), Positives = 203/408 (49%), Gaps = 33/408 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGG--PLT-LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TDIDD ++ERA      +   D  + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDIDDPLLERA------VANGDDWTALAERETTLFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE   +I F   S P++G  S    +  ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDIYFSVESDPSFGGVSGLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  + P EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWLAARPGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGERPFAKAYVHAGMVALDGEKMSKSKGNLVFVSALRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----AV 351
                     IRLA+L  HYRE  ++T   L EA+  L++W    +             +
Sbjct: 304 ----GVDPAAIRLALLAHHYREDWEWTDGVLQEAQERLARWRAAVSRPDGPPADALLDEI 359

Query: 352 LSALYNDLNTVSAIQALHKL----ARESTKNHDLLPIF-NASAHILGI 394
            +AL NDL+  SA+ A+ +     A E   +     +   A   +LG+
Sbjct: 360 RTALANDLDAPSALAAVDRWASAQASEGGTDEGAPGLVSRAVDALLGV 407


>gi|68072763|ref|XP_678295.1| cysteine--tRNA ligase [Plasmodium berghei strain ANKA]
 gi|56498716|emb|CAH94957.1| cysteine--tRNA ligase, putative [Plasmodium berghei]
          Length = 582

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 155/543 (28%), Positives = 241/543 (44%), Gaps = 113/543 (20%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ 
Sbjct: 21  TNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYF- 79

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L P+  
Sbjct: 80  KYDVFMVINITDIDDKIIKRSEEEKVN------FTELARKWEYEFWEDMKSLNVLLPSSI 133

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQ-------- 173
            R + ++ ++I  I+ II + +AY +    + FD  +     +    +++          
Sbjct: 134 TRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKI 193

Query: 174 --KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
               G       +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV 
Sbjct: 194 LEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVL 253

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +
Sbjct: 254 DIHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNM 313

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEAEILLSK------------- 336
           L       + + +  IR+  L+  +   ++++   + +T+  I + K             
Sbjct: 314 L-------KKYTSNQIRILFLLNKWDSFMNYSPNGEGMTQC-IEIDKFFTNFFALINMKI 365

Query: 337 -----------WPQTSTSKGIIDPA----VLSALYNDLNTVSAIQALHKLARESTKNHD- 380
                      W  T      I       + +   ++ NT  A+ ++ KL  E       
Sbjct: 366 KNFDLNNCDLYWNDTDNKLNNIFRQTKTNIHNFFLDNFNTPEALVSIQKLITEINIYLQN 425

Query: 381 -------LLPI-------------------------FNASAHILG--------IEVCKEH 400
                  LL +                         F+   H+LG        I      
Sbjct: 426 GKIQIGLLLELKQYINFIMTTFGLFYDEPQKTKSNNFDNLLHVLGSYRSNIRTILQKNAK 485

Query: 401 LNKNISIAIEKLVQERLILLKMKKF---------------SSADYIRKQ-LESKGFILED 444
           L + +S  I+    +   L   KKF                  D +R Q L + G +++D
Sbjct: 486 LIRKVSKEIKTDASDTASLDNDKKFNEFIKDIKTNNENLLKECDILRDQHLLNMGILIDD 545

Query: 445 YKN 447
             N
Sbjct: 546 RPN 548


>gi|70953127|ref|XP_745684.1| cysteine--tRNA ligase [Plasmodium chabaudi chabaudi]
 gi|56526086|emb|CAH76958.1| cysteine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
          Length = 582

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 147/504 (29%), Positives = 231/504 (45%), Gaps = 77/504 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ 
Sbjct: 21  TNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYF- 79

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L PT  
Sbjct: 80  KYDVFMVINITDIDDKIIKRSEEEKVN------FTELARKWEYEFWEDMKNLNVLLPTSI 133

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQ-------- 173
            R + ++ ++I  I+ II + +AY +    + FD  +     +    +++          
Sbjct: 134 TRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKI 193

Query: 174 --KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
               G       +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV 
Sbjct: 194 LEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVL 253

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +
Sbjct: 254 DIHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNM 313

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEAEILLSKWPQ---------- 339
           L       + + +  IR+  L+  +   ++++   + +T+  I + K+            
Sbjct: 314 L-------KKYTSNQIRILFLLNKWDSFMNYSPNGEGMTQC-IEIDKFFTNFFALINMKI 365

Query: 340 ---TSTSKGIIDPAVLSALY---------------NDLNTVSAIQALHKLARESTKN--- 378
                 +  +      + L                ++ NT  A+ A+ KL  E       
Sbjct: 366 KNFDLNNCDLYWNDTDNKLNNTFRQTKTNIHNFFLDNFNTPEALVAIQKLITEINIYLQN 425

Query: 379 --------HDLLPIFNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLK--MKKFS 426
                    +L    N   +  G+  +  ++    N    +  L   R  +     K   
Sbjct: 426 GKVQIGLLLELKHYINFIMNTFGLFYDQAQKAKPNNFDNLLHVLGSYRSNIRTILQKN-- 483

Query: 427 SADYIRKQLESKGFILEDYKNPDN 450
            A  IRK  +       D  +P  
Sbjct: 484 -AKLIRKASKEIKI---DSSDPAT 503


>gi|324997324|ref|ZP_08118436.1| cysteinyl-tRNA synthetase [Pseudonocardia sp. P1]
          Length = 412

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 125/413 (30%), Positives = 206/413 (49%), Gaps = 36/413 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             +++++T   ++       P  +  MYVCG T YD  H+G+A   + FD++ RL R   
Sbjct: 17  PPLRLHDTATGRVR---PTAPGPVATMYVCGITPYDATHLGHAATYLAFDLVNRLWRDLG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV+N+TDID+ ++ERA ++       D   ++  + T  F +D   L  L P  
Sbjct: 74  HE--VHYVQNVTDIDEPLLERAERDQ------DDWVVLGLRETALFREDMEALRVLPPRQ 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
              A   IP++  L++ ++  G AY  ++    ++  D S+   +G  S   ++     +
Sbjct: 126 FVGAVEAIPEIAELVEKLVASGAAYRLDDPEYPDVYHDVSATGRFGYESNYDLETMLQFS 185

Query: 178 RV----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           R     P++  K+NP D +LW+ + P EP WES  GRGRPGWH+EC+A+  + LG+  D+
Sbjct: 186 RERGGDPDRPGKRNPLDPLLWRMARPGEPAWESGLGRGRPGWHVECAAIGLNRLGQQIDL 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           +GGG DLIFPHHE     +         A  ++H G + L+G KMSKS GN + +++L  
Sbjct: 246 NGGGSDLIFPHHECGALHAESLTGEHPFARHYVHTGMIGLDGEKMSKSKGNLVFVSKLRS 305

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
           +           V+R+A+L  HYR+   +T +   + E  +++W +        D A L 
Sbjct: 306 S------GVDPNVVRVALLDGHYRDDRSWTDEVHAKGEGRVARWREAVELDAGPDAAELV 359

Query: 354 A-----LYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEV 396
           A     L +DL+T  A+ A+   A E+                A   +LG+ +
Sbjct: 360 AKLRTHLADDLDTPGALAAVDAWADEALTRRGTDAGAPQLARTALDALLGVRL 412


>gi|82541403|ref|XP_724944.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23479772|gb|EAA16509.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 579

 Score =  371 bits (954), Expect = e-100,   Method: Composition-based stats.
 Identities = 147/487 (30%), Positives = 227/487 (46%), Gaps = 74/487 (15%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ 
Sbjct: 21  TNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYF- 79

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L P+  
Sbjct: 80  KYDVFMVINITDIDDKIIKRSEEEKVN------FTELARKWEYEFWEDMKSLNVLLPSSI 133

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQ-------- 173
            R + ++ ++I  I+ II + +AY +    + FD  +     +    +++          
Sbjct: 134 TRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKI 193

Query: 174 --KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
               G       +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V 
Sbjct: 194 LEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGNVL 253

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITI  +
Sbjct: 254 DIHSGGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKSM 313

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--QRLTEAEILLSK------------- 336
           L       + + A  IR+  L+  +   ++++   + +T+  I + K             
Sbjct: 314 L-------KKYTANQIRILFLLNKWDSFMNYSPNGEGMTQC-IEIDKFFTNFFALINMKI 365

Query: 337 -----------WPQTSTSKGIIDPA----VLSALYNDLNTVSAIQALHKLARESTKN--- 378
                      W  T      I       + +   ++ NT  A+ A+ KL  E       
Sbjct: 366 KNFDLNNCDLYWNDTDNKLNNIFRQTKTNIHNFFLDNFNTPEALVAIQKLITEINIYLQN 425

Query: 379 --------HDLLPIFNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLK--MKKFS 426
                    +L    N     LG+  +  ++  + N    +  L   R  +     K   
Sbjct: 426 GKIQIGLLLELKQYINFIMTTLGLFYDEAQKTKSNNFDNLLHVLGSYRSNIRAILQKN-- 483

Query: 427 SADYIRK 433
            A  IRK
Sbjct: 484 -AKLIRK 489


>gi|297198535|ref|ZP_06915932.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sviceus ATCC 29083]
 gi|197716199|gb|EDY60233.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sviceus ATCC 29083]
          Length = 409

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/408 (32%), Positives = 203/408 (49%), Gaps = 33/408 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T         ++DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGG---LVSLDPGPVARLYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TDIDD ++ERA ++          + +  K T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDIDDPLLERAERDS------IDWAALAEKETVLFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE   +  F   S PN+G  S       ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDTYFSVESDPNFGKVSNLDAAAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGASLGRGRPGWHIECVAIALDHLGMTFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L     
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSQLRR--- 302

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     IRLA+L  HYR   ++T Q L +A   L +W    +     S   +   +
Sbjct: 303 ---EGVDPAAIRLALLAHHYRADWEWTDQVLQDAVDRLGRWRAAVSRPDGPSAEELVEEI 359

Query: 352 LSALYNDLNTVSAIQALHKLA--RESTKNHDLLP---IFNASAHILGI 394
             AL NDL+  +A+ A+ + A  +E     D+     +  A   +LG+
Sbjct: 360 REALANDLDAPTALTAVDRWAALQEEQGGTDMGAPGVVTRAVDALLGV 407


>gi|271967212|ref|YP_003341408.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
 gi|310947222|sp|D2AU10|MSHC_STRRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|270510387|gb|ACZ88665.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
          Length = 407

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 121/407 (29%), Positives = 196/407 (48%), Gaps = 31/407 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++++T   ++   Q       R+YVCG T YD  H+G+A   + FD++ RL R    E
Sbjct: 18  PLRLFDTAAGEVGPTQP--GPTARLYVCGITPYDATHLGHANTYLAFDLVNRLWRDAGHE 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V + +N TD+DD ++ERA Q             +  +  + F  D   L  L P    
Sbjct: 76  --VHFTQNATDVDDPLLERAEQ------TGQDWRELAEREIELFRTDMEALRILPPREYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRV 179
             T  I Q+  LI+ +   G  Y+ + ++ FD ++ P +G+ S    +            
Sbjct: 128 GVTEVIDQVAELIELLRDKGATYDLDGDLYFDVAAAPKFGAVSGYSEERMLDLFGQRGGD 187

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P++  KK+P D++LW+   P EP W SP+G+GRPGWHIEC+A++   LG  FD+ GGG D
Sbjct: 188 PDRAGKKHPLDWLLWRAERPGEPSWPSPFGQGRPGWHIECTAIALANLGSGFDVAGGGSD 247

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHE    +   A      A  ++H G + L+G KMSKS GN + ++ L        
Sbjct: 248 LIFPHHECGAHEGHVACGEWPFAKAYVHAGMVALDGEKMSKSKGNLVFVSRLR------- 300

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA 354
           +      IRLA+L  HYR   ++T  +L  AE+ L++W          +       + + 
Sbjct: 301 KEADPMAIRLALLAHHYRSDWEWTADQLASAEVRLARWRSAVGLPAGPEAETVLAELRAR 360

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEV 396
           + +DL+   A+  +   A  +       P     + +    +LG+E+
Sbjct: 361 MTDDLDAPGALAVVDAWADRALAGGGTDPGAPALVRDIVDALLGVEL 407


>gi|329939109|ref|ZP_08288483.1| cysteinyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329301994|gb|EGG45887.1| cysteinyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 409

 Score =  371 bits (952), Expect = e-100,   Method: Composition-based stats.
 Identities = 120/380 (31%), Positives = 189/380 (49%), Gaps = 26/380 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T        Q       R+YVCG T YD  H+G+A     FD++ R+      
Sbjct: 17  RDLRIHDTATGAPVTLQP--GPVARLYVCGITPYDATHMGHAATYNAFDLVQRVW--LDT 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           ++ V YV+N+TD+DD ++ERA ++          + +  + T+ F +D T L  L P H 
Sbjct: 73  KRQVHYVQNVTDVDDPLLERAERDGLDW------TALAEQETKLFREDMTALRMLPPRHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP ++ L++ +   G AY+   ++ F   S P++G  S       ++ +     
Sbjct: 127 IGAVEAIPGIVPLVERLRELGAAYDLEGDVYFSVESDPHFGEVSHLDAAAMRLLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L      
Sbjct: 247 SDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSRLRRD--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVL 352
                    IRLA+   HYR   ++T Q L +A   L +W    +     +   +  AV 
Sbjct: 304 ---GVDPAAIRLALHAHHYRSDWEWTDQVLRDAVARLERWRAAVSRPDGPAAEDMVEAVR 360

Query: 353 SALYNDLNTVSAIQALHKLA 372
           +AL +DLN   A+ A+ +  
Sbjct: 361 AALADDLNAPEALAAVDRWV 380


>gi|227833074|ref|YP_002834781.1| MshC ligase [Corynebacterium aurimucosum ATCC 700975]
 gi|262182436|ref|ZP_06041857.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
 gi|310947180|sp|C3PG89|MSHC_CORA7 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|227454090|gb|ACP32843.1| MshC ligase [Corynebacterium aurimucosum ATCC 700975]
          Length = 414

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 128/414 (30%), Positives = 201/414 (48%), Gaps = 34/414 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + +Y++ + ++     I      MYVCG T YD  H+G+A   + FD++YR L    
Sbjct: 16  PSPLHLYDSADGEVKRLN-IKGETATMYVCGITPYDSTHLGHAATYLTFDLIYRQL--LD 72

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V Y +NITD+DD + ERA ++            + +     F  D   L+   P H
Sbjct: 73  NGYKVNYAQNITDVDDPLFERAERD------GVDWRELGTSQINLFRSDMELLSVFPPQH 126

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQK--- 174
              A   I ++  ++Q ++  G AY  ++    D      +  N+G  S    ++ +   
Sbjct: 127 FVGAMEAIDEITEMVQALLDAGAAYVVDDPDYPDVYASIEATKNFGYESNYSREQMETFF 186

Query: 175 -MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 PE+  K++P D ++W+     EP WESP+G GRPGWHIECSA++++ LG  FDI
Sbjct: 187 AERGGDPERPGKRDPLDALIWRAHREGEPAWESPFGPGRPGWHIECSAIATNRLGSSFDI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   A +  A  +E+ A  ++H G + LEG KMSKS GN + +++L+E
Sbjct: 247 QGGGSDLKFPHHEFSAAHAEAALGVERMAQSYVHTGMIGLEGTKMSKSLGNLVFVHKLVE 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---- 349
                        IRL +   HYRE  D++ + L  A+  L +W   S + G ++     
Sbjct: 307 A------GVDPSAIRLGVFSGHYREDRDWSDEVLHTAQERLERWRAASRNPGTVEEIKEV 360

Query: 350 --AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEV 396
              V  AL  DL+T  AI  L + A ++    +        +  A   +LG+ +
Sbjct: 361 VHNVRLALAEDLDTQRAIAVLDQWAEQALGAAEASEEASDVLRTAVNSLLGVRL 414


>gi|120404450|ref|YP_954279.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|310947205|sp|A1TAS3|MSHC_MYCVP RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|119957268|gb|ABM14273.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 429

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 119/387 (30%), Positives = 187/387 (48%), Gaps = 29/387 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y++ +R++        +   MYVCG T YD  H+G+A   + FD+++RL R    
Sbjct: 34  PQLRLYDSADRQVRPVAP--GATATMYVCGITPYDATHLGHAATYLTFDLVHRLWRDSG- 90

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+NITD+DD + ERA+++            +  + T+ F +D   L  L P   
Sbjct: 91  -HDVHYVQNITDVDDPLFERAQRD------GIGWRELGDRETELFREDMAALRVLPPRDY 143

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQ----K 174
             AT  I +++ L++ ++  G AY  ++    D      +   +G  S    D       
Sbjct: 144 VAATEAIAEVVELVEKMLAAGAAYVVDDPQYPDVYFRADATVQFGYESGYDRDTMLALFA 203

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +P D +LW    P EP W SP+G GRPGWH+EC+A++   +G   DI 
Sbjct: 204 ERGGDPDRPGKSDPLDALLWLAERPGEPSWPSPFGPGRPGWHVECAAIALSRIGTGLDIQ 263

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++L   
Sbjct: 264 GGGSDLIFPHHEFSAAHAECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLRRD 323

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                       IRL +   HYR+   ++   L EA   L +W   +   G  D      
Sbjct: 324 ------GVDPAAIRLGLFAGHYRDDRFWSPAVLDEALARLHRWRSATALAGAPDATDVVA 377

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST 376
            V   L +DL+T  A+ AL   A ++ 
Sbjct: 378 RVRRYLADDLDTPKALAALDGWATDAL 404


>gi|328881306|emb|CCA54545.1| L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Streptomyces venezuelae ATCC 10712]
          Length = 409

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 125/407 (30%), Positives = 199/407 (48%), Gaps = 31/407 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T                R+YVCG T YD  H+G+A     FD++ R+      
Sbjct: 17  RDLRIHDTATGGRVTLAP--GPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LDT 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           ++ V YV+N+TD+DD ++ERA ++            +  + T  F +D T L  L P H 
Sbjct: 73  KRQVHYVQNVTDVDDPLLERAIRDGVDWVG------LAERETALFREDMTALRMLPPQHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP ++ L++ +   G AYE + +I F   + P++G  S    +  +  +     
Sbjct: 127 IGAVEAIPGIVPLVERLRDSGAAYELDGDIYFSVDADPHFGEVSHYSTELMRHLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            PE+  KKNP D +LW  +   EP W+    G GRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPERPGKKNPLDPMLWMAAREGEPSWDGASLGAGRPGWHIECVAIALDHLGMGFDVQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHE   + +         A  ++H G + L+G KMSKS GN + +++L      
Sbjct: 247 SDLIFPHHEMGASHAQALTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSKLRRD--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVL 352
                    IRLA+L   YR+  ++T Q L +A+  L +W    +     S   +   + 
Sbjct: 304 ---GVDPAAIRLALLSHRYRDDWEWTDQVLRDAQERLGRWRAAVSRPDGPSADALVEELR 360

Query: 353 SALYNDLNTVSAIQALHKLAR----ESTKNHDLLPIF-NASAHILGI 394
            AL +DL+T +A+ A+ + A     E   +     +   A   +LG+
Sbjct: 361 EALSDDLDTPTALVAVDRWAELQAAEGGTDDSAPGLVSRAVDALLGV 407


>gi|315443963|ref|YP_004076842.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|315262266|gb|ADT99007.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 412

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 121/410 (29%), Positives = 195/410 (47%), Gaps = 34/410 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++++ +R+I        +   MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 17  PQLRLFDSADRQIRPVSP--GATATMYVCGITPYDATHLGHAATYLTFDLVNRVWRDSG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+NITD+DD + ERA ++            +  + T  F +D   L  + P   
Sbjct: 74  -HDVHYVQNITDVDDPLFERAARD------GIGWRELGDRETDLFREDMAALRVVPPRDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQ----K 174
             AT  I ++I +++ ++  G AY  ++    D      +   +G  S    +       
Sbjct: 127 VAATEAIAEVIEVVEKLLASGAAYVVDDAQYPDVYFHAGATVQFGYESGYDRETMLALFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +P D +LW+   P EP W SP+G GRPGWH+EC+A++   +G V DI 
Sbjct: 187 ERGGDPDRPGKSDPLDALLWRAERPEEPSWPSPFGPGRPGWHVECAAIAMTRIGNVLDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEFSSAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLRRD 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                       IRL +   HYR+   ++   L EA+  L +W   +   G  D      
Sbjct: 307 ------GVDPGAIRLGLFAGHYRQDRYWSPAVLDEAQQRLHRWRSATALDGAPDATDVVA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGI 394
            V   L +DL+T  A+ A+   A ++     HD      +  A   +LG+
Sbjct: 361 RVRRYLADDLDTPKALAAIDGWAEDTLSYGGHDRTAGPTVSAAVDALLGV 410


>gi|255325703|ref|ZP_05366800.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium tuberculostearicum SK141]
 gi|255297313|gb|EET76633.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium tuberculostearicum SK141]
          Length = 415

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 122/410 (29%), Positives = 205/410 (50%), Gaps = 32/410 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y++  + I   + +      MYVCG T YD  H+G+A   + FD++YR   +    
Sbjct: 21  QLRLYDSANQTIAPVE-VAGDTATMYVCGITPYDSTHLGHAATYLTFDLIYRA--FLDAG 77

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YV+NITD+DD + ERA ++            + +     F  D   L+   P    
Sbjct: 78  KKVHYVQNITDVDDPLFERAERD------GVDWRELGTSQIDLFRSDMELLSVFPPQDYI 131

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK----M 175
            A   + +++ ++Q ++  G AY  ++    +I     +   +G  S    +E +     
Sbjct: 132 GAMEAVDEIVEMVQKLLDAGAAYVVDDPEHPDIYASIEATERFGYESNYSAEEMRTFFAE 191

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  KKNP D ++W+     EP W+SP+G GRPGWHIECSA++++ LG  FDI G
Sbjct: 192 RGGDPDRPGKKNPLDALIWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGSTFDIQG 251

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHE   A +  A  +E+ A  ++H G + L+G KMSKS GN + +++L+   
Sbjct: 252 GGSDLKFPHHEFSAAHAEAALNVERMAQFYVHTGMIGLDGVKMSKSLGNLVFVHKLVGAG 311

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------IDP 349
           +          IRL +   HYR+  D++ + L  A+  L+ W +     G       +  
Sbjct: 312 E------DPSAIRLGVFAGHYRDERDWSDEVLDAAKRRLAAWREALAQPGSMAGAEGVVA 365

Query: 350 AVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFN-ASAHILGIEV 396
            + +A+ NDL+T +A+ A+ + A     T       +   A   +LG++ 
Sbjct: 366 KLRAAIANDLDTPAALAAVDEWAEADRGTDEDGAADLVRTALNSLLGVQA 415


>gi|145223636|ref|YP_001134314.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|310947196|sp|A4TB85|MSHC_MYCGI RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|145216122|gb|ABP45526.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
          Length = 444

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 121/410 (29%), Positives = 195/410 (47%), Gaps = 34/410 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++++ +R+I        +   MYVCG T YD  H+G+A   + FD++ R+ R    
Sbjct: 49  PQLRLFDSADRQIRPVSP--GATATMYVCGITPYDATHLGHAATYLTFDLVNRVWRDSG- 105

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+NITD+DD + ERA ++            +  + T  F +D   L  + P   
Sbjct: 106 -HDVHYVQNITDVDDPLFERAARD------GIGWRELGDRETDLFREDMAALRVVPPRDY 158

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQ----K 174
             AT  I ++I +++ ++  G AY  ++    D      +   +G  S    +       
Sbjct: 159 VAATEAIAEVIEVVEKLLASGAAYVVDDAQYPDVYFHAGATVQFGYESGYDRETMLALFA 218

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +P D +LW+   P EP W SP+G GRPGWH+EC+A++   +G V DI 
Sbjct: 219 ERGGDPDRPGKSDPLDALLWRAERPEEPSWPSPFGPGRPGWHVECAAIAMTRIGNVLDIQ 278

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++L   
Sbjct: 279 GGGSDLIFPHHEFSSAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLRRD 338

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                       IRL +   HYR+   ++   L EA+  L +W   +   G  D      
Sbjct: 339 ------GVDPGAIRLGLFAGHYRQDRYWSPAVLDEAQQRLHRWRSATALDGAPDATDVVA 392

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGI 394
            V   L +DL+T  A+ A+   A ++     HD      +  A   +LG+
Sbjct: 393 RVRRYLADDLDTPKALAAIDGWAEDTLSYGGHDRTAGPTVSAAVDALLGV 442


>gi|118472573|ref|YP_888468.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|308197104|sp|A0QZY0|MSHC_MYCS2 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|118173860|gb|ABK74756.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 412

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++++ +R++            MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 17  PALRLFDSADRQVRPVTP--GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLW--LDA 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++            +  + TQ F +D   L  L P   
Sbjct: 73  GHTVQYVQNVTDVDDPLFERAERD------GIDWRTLGDRETQLFREDMAALRVLPPHDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQ----K 174
             AT+ I +++ +++ ++  G AY   +    D      +   +G  S    D       
Sbjct: 127 VAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRADATAQFGYESGYDRDTMLTLFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +  D +LW+   P EP W SP+GRGRPGWH+ECSA++   +G   DI 
Sbjct: 187 ERGGDPDRPGKSDQLDALLWRAERPGEPSWPSPFGRGRPGWHVECSAIALTRIGTGLDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                +      IRL +   HYRE   ++ + L EA   L++W   +      D      
Sbjct: 305 ----AQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEAPDATDVIA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
            V   L +DL+T  A+ AL     ++     HD      +      +LG+++
Sbjct: 361 RVRQYLADDLDTPKALAALDGWCTDALSYGGHDTESPRLVATTVDALLGVDL 412


>gi|219109269|pdb|3C8Z|A Chain A, The 1.6 A Crystal Structure Of Mshc: The Rate Limiting
           Enzyme In The Mycothiol Biosynthetic Pathway
 gi|219109270|pdb|3C8Z|B Chain B, The 1.6 A Crystal Structure Of Mshc: The Rate Limiting
           Enzyme In The Mycothiol Biosynthetic Pathway
          Length = 414

 Score =  368 bits (946), Expect = e-99,   Method: Composition-based stats.
 Identities = 119/412 (28%), Positives = 193/412 (46%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++++ +R++            MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 19  PALRLFDSADRQVRPVTP--GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLW--LDA 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++            +  + TQ F +D   L  L P   
Sbjct: 75  GHTVQYVQNVTDVDDPLFERAERD------GIDWRTLGDRETQLFREDMAALRVLPPHDY 128

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQ----K 174
             AT+ I +++ +++ ++  G AY   +    D      +   +G  S    D       
Sbjct: 129 VAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRADATAQFGYESGYDRDTMLTLFA 188

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +  D +LW+   P EP W SP+GRGRPGWH+ECSA++   +G   DI 
Sbjct: 189 ERGGDPDRPGKSDQLDALLWRAERPGEPSWPSPFGRGRPGWHVECSAIALTRIGTGLDIQ 248

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + +++L   
Sbjct: 249 GGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQLR-- 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                +      IRL +   HYRE   ++ + L EA   L++W   +      D      
Sbjct: 307 ----AQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEAPDATDVIA 362

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
            V   L +DL+T  A+ AL     ++     HD      +      +LG+++
Sbjct: 363 RVRQYLADDLDTPKALAALDGWCTDALSYGGHDTESPRLVATTVDALLGVDL 414


>gi|237785512|ref|YP_002906217.1| MshC ligase [Corynebacterium kroppenstedtii DSM 44385]
 gi|310947182|sp|C4LIL9|MSHC_CORK4 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|237758424|gb|ACR17674.1| MshC ligase [Corynebacterium kroppenstedtii DSM 44385]
          Length = 520

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 124/401 (30%), Positives = 196/401 (48%), Gaps = 36/401 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + +++T  R++T     D + +  YVCG T YD  H+G+A   + FDVL R L      
Sbjct: 23  PLHMWDTASREVTPLTPSDEATV--YVCGITPYDSTHLGHAATYVTFDVLNRQL--LANG 78

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V +V+N+TD+DD + ERA+++            +  + T  F +D   L  + PT   
Sbjct: 79  HRVNFVQNVTDVDDPLFERAQRD------GVDWQELGEEQTDLFRQDMANLGVIPPTSYI 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM---- 175
            A   IP +I ++  ++ +G AY  ++    D     ++ P +G  SR      +     
Sbjct: 133 GAVEAIPDVIDMVSTLLDNGSAYVVDDPTYPDVYADRTATPQFGYESRYDEATMEQFFAE 192

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  K++P D +LW+   P EP W+SP+GRGRPGWHIEC+A+++ YLG  FD+ G
Sbjct: 193 RGGDPDRPGKRDPLDSLLWRAERPGEPAWDSPFGRGRPGWHIECAAIAARYLGSHFDVQG 252

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A    A  +E+ A+ ++H G + L G KMSKS GN + ++ L    
Sbjct: 253 GGEDLIFPHHEYSAAHVEAACGVERMADHYMHTGLIALGGVKMSKSLGNLVFVSRLCNAG 312

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
                      IRLA+   HYR+  +++   L  A   L+ W     +    + A     
Sbjct: 313 T------DPSSIRLALYAGHYRDQRNWSDALLAAASRRLALWRTAVETVHAHNDADSEAR 366

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
                  V  AL  DL+T +A+  + + A        +  +
Sbjct: 367 ARRLVDDVRQALATDLDTPAAVDLVDEWAGSIVDKEKIWDL 407


>gi|171920807|ref|ZP_02695358.2| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|225550663|ref|ZP_03771612.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903571|gb|EDT49860.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|225379817|gb|EEH02179.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 436

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 148/462 (32%), Positives = 223/462 (48%), Gaps = 51/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV NITDIDDKII  A   +           ++     +++K    L  L     P+
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKEL------EVSEYYFNEYLKIKKALNTLE-MINPK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R+    +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DFILWK++      W +PWG GRPGWH ECS + + Y+G+   IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKG-IMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL         +  
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDPA- 350
            V+R       Y++PI F+ + + + E  + K                   S   ID   
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLTQIDHFG 339

Query: 351 -VLSALYNDLNTVSAIQALHKLAREST----KNHDL------LPIFNASAHILGIEVCKE 399
                + +DL+ V  +  +H   ++      KN D+      L        ILGI     
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILGINFVDL 399

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H ++N+      L+      +  K +  AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|209554323|ref|YP_002284545.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|209541824|gb|ACI60053.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
          Length = 436

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 148/462 (32%), Positives = 223/462 (48%), Gaps = 51/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV NITDIDDKII  A   +           ++     +++K    L  L     P+
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKEL------EVSEYYFNEYLKIKKALNTLE-MINPK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R+    +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DFILWK++      W +PWG GRPGWH ECS + + Y+G+   IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKG-IMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL         +  
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDP-- 349
            V+R       Y++PI F+ + + + E  + K                   S   ID   
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLTQIDHFG 339

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST----KNHDL------LPIFNASAHILGIEVCKE 399
                + +DL+ V  +  +H   ++      KN D+      L        ILGI     
Sbjct: 340 FFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILGINFVDL 399

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H ++N+      L+      +  K +  AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|186701979|ref|ZP_02971607.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|186700745|gb|EDU19027.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 436

 Score =  368 bits (945), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 149/462 (32%), Positives = 224/462 (48%), Gaps = 51/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV NITDIDDKII  A   +           ++     +++K    L  L     P+
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKEL------EVSEYYFNEYLKIKKALNTLE-MINPK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R+    +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DFILWK++      W +PWG GRPGWH ECS + + Y+G+   IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKG-IMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL         +  
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDPA- 350
            V+R       Y++PI F+ + + + E  + K                   S   ID   
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNNQLKSLTQIDHFG 339

Query: 351 -VLSALYNDLNTVSAIQALH-------KLARESTKNHDL---LPIFNASAHILGIEVCKE 399
                + +DL+ V  +  +H        L +E+   ++L   L        ILGI     
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKENKDMNELKLNLTQLLYMLDILGINFVDL 399

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H +KN+      L+      +  K +  AD +RKQL + G +
Sbjct: 400 HNDKNL-----ALLNTWKNYIDKKDYVKADELRKQLINIGIL 436


>gi|227488922|ref|ZP_03919238.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
 gi|227091106|gb|EEI26418.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
          Length = 442

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 129/412 (31%), Positives = 207/412 (50%), Gaps = 36/412 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            + +Y++ + +I   + +    +  MYVCG T YD  H+G+A   + FD++YR L+    
Sbjct: 48  PLNLYDSADDRI---KPVKAGKVATMYVCGITPYDATHLGHAATYLAFDLIYRQLKA--N 102

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++      N     + +     F  D  +L+   P   
Sbjct: 103 GHDVHYVQNVTDVDDPLFERAERD------NVDWRELGTSQIDLFRSDMEKLSVFPPQDF 156

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQ----K 174
                 + ++I ++Q +I  G  Y  ++    ++    ++   +G  SR   +E      
Sbjct: 157 VGVQEAVDEVIDMVQELIDKGVVYAIDDPEYPDLYVRVNATEQFGYESRFSREEMLDVFA 216

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                PE+  KK+P D ++WK + P EP W++P+G GRPGWHIECSA++ + L   FDI 
Sbjct: 217 ERGGDPERPGKKDPLDALVWKMARPGEPSWDAPFGAGRPGWHIECSAIARNRLSVPFDIQ 276

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++LLE 
Sbjct: 277 GGGRDLVFPHHEFSAAHAEAATGEPRMAGHYVHGGMIALDGVKMSKSLGNLVFVSKLLE- 335

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
                       IRL++   HYR   DF+   L + E L+ +       P T      + 
Sbjct: 336 -----EGHTPAAIRLSVFSGHYRADRDFSGAILKQCESLVERLRASVDKPSTRAETEALV 390

Query: 349 PAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLP---IFNASAHILGIEV 396
             +  AL +DL+T  AI A+   A RE T + D      + +A   +LGI++
Sbjct: 391 TEIREALADDLDTPRAIAAIEAWANREWTGDSDPEAGRIVASALDALLGIKL 442


>gi|311739444|ref|ZP_07713279.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
 gi|311305260|gb|EFQ81328.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
          Length = 415

 Score =  368 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 122/410 (29%), Positives = 205/410 (50%), Gaps = 32/410 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++Y++  + I   + +      MYVCG T YD  H+G+A   + FD++YR   +    
Sbjct: 21  QLRLYDSANQTIAPVE-VAGDTATMYVCGITPYDSTHLGHAATYLTFDLIYRA--FLDAG 77

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V YV+NITD+DD + ERA ++            + +     F  D   L+   P    
Sbjct: 78  KKVHYVQNITDVDDPLFERAERD------GVDWRELGTSQIDLFRSDMELLSVFPPQDYI 131

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK----M 175
            A   + +++ ++Q ++  G AY  ++    +I     +   +G  S    +E +     
Sbjct: 132 GAMEAVDEVVEMVQKLLDAGAAYVVDDPEHPDIYASIEATERFGYESNYSAEEMRTFFAE 191

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  KKNP D ++W+     EP W+SP+G GRPGWHIECSA++++ LG  FDI G
Sbjct: 192 RGGDPDRPGKKNPLDALIWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGSTFDIQG 251

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHE   A +  A  +E+ A  ++H G + L+G KMSKS GN + +++L+   
Sbjct: 252 GGSDLKFPHHEFSAAHAEAALNVERMAQFYVHTGMIGLDGVKMSKSLGNLVFVHKLVGAG 311

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------IDP 349
           +          IRL +   HYR+  D++ + L  A+  L+ W +     G       +  
Sbjct: 312 E------DPSAIRLGVFAGHYRDERDWSDEALDAAKRRLAAWREALAQPGSMAGAEGVVA 365

Query: 350 AVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFN-ASAHILGIEV 396
            + +A+ NDL+T +A+ A+ + A     T       +   A   +LG++ 
Sbjct: 366 KLRAAIANDLDTPAALAAVDEWAEADRGTDEDGAADLVRTALNSLLGVQA 415


>gi|185178726|ref|ZP_02964542.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024163|ref|ZP_02996889.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518554|ref|ZP_03004015.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225551139|ref|ZP_03772085.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209327|gb|EDU06370.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018795|gb|EDU56835.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188997891|gb|EDU66988.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|225378954|gb|EEH01319.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 436

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 148/462 (32%), Positives = 223/462 (48%), Gaps = 51/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV NITDIDDKII  A   +           ++     +++K    L  L     P+
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKEL------EVSEYYFNEYLKIKKALNTLE-MINPK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R+    +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DFILWK++      W +PWG GRPGWH ECS + + Y+G+   IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKG-IMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL         +  
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDPA- 350
            V+R       Y++PI F+ + + + E  + K                   S   ID   
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLTQIDHFR 339

Query: 351 -VLSALYNDLNTVSAIQALHKLAREST----KNHDL------LPIFNASAHILGIEVCKE 399
                + +DL+ V  +  +H   ++      KN D+      L        ILGI     
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILGINFVDL 399

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H ++N+      L+      +  K +  AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|290977210|ref|XP_002671331.1| predicted protein [Naegleria gruberi]
 gi|284084899|gb|EFC38587.1| predicted protein [Naegleria gruberi]
          Length = 416

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 121/356 (33%), Positives = 173/356 (48%), Gaps = 43/356 (12%)

Query: 7   IYNTLERKITEF--------QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
           +YNTL +               +    I  Y CGPTVYD  H+G+AR  +  D++YR+L 
Sbjct: 55  LYNTLSKSKVSLKIAKRLSDVPV----INWYSCGPTVYDDTHLGHARNYVCLDIIYRILA 110

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +Y+    V +V  ITD+DDKI++RA +      +    S I+ K    F++D  +L  + 
Sbjct: 111 HYF-NYPVLHVMGITDVDDKILKRAAE------LGKQPSEISRKYEFDFIEDMKKLNVIQ 163

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN----YGSFSRRKIDEQ 173
           P    R T HI ++   ++ +  +G  Y  AN  + FD+         YG  S     E 
Sbjct: 164 PYVYTRVTEHIEEIKQFVEEMEKNGFTYTTANGGVYFDSKKFEQNDHYYGKLSPNNAQES 223

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK---- 229
                +  +  KK+P DF LWK ++    GWES WG GRPGWHIECSAM  H        
Sbjct: 224 IQQEHIEHREEKKDPRDFALWKFTSRDYLGWESKWGYGRPGWHIECSAMIDHIFNNKSGA 283

Query: 230 -VFDIHGGGLDLIFPHHENEIAQSCCADRIE-------KTANIWIHNGFLNLEGRKMSKS 281
              DIH GG+DL FPHH NEIAQS   +             N +IH G L+++G KMSKS
Sbjct: 284 ATIDIHSGGIDLAFPHHNNEIAQSEAKNHAHFCCSRETNWCNYFIHVGHLHIKGLKMSKS 343

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
             NFITI + L       + +     R+  L+  Y + +D+    + EA  +  + 
Sbjct: 344 LKNFITIKDFL-------KRYSPDQFRIFCLLHQYNQTLDYNEDAIGEAIKVEKRI 392


>gi|256376329|ref|YP_003099989.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Actinosynnema mirum DSM 43827]
 gi|310947170|sp|C6WIA0|MSHC_ACTMD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|255920632|gb|ACU36143.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Actinosynnema mirum DSM 43827]
          Length = 412

 Score =  367 bits (943), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 128/411 (31%), Positives = 199/411 (48%), Gaps = 34/411 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + +++++T   ++           R+YVCG T YD  H+G+A   + FD++ R+     
Sbjct: 16  PRPLRLHDTATGEVRPTAP--GDTARLYVCGITPYDATHLGHAATYLAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+N+TD+DD ++ERA ++       D   ++  + T  F +D   L  LAP  
Sbjct: 72  NGHDVHYVQNVTDVDDPLLERAARDQ------DDWVVLAMRETALFREDMEALRVLAPRE 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQ---- 173
              A   IP ++ +I+ ++  G AY  +++   D      + PN+G  S    +      
Sbjct: 126 YVGAVESIPGIVDMIEKLLASGAAYRLDDDEYPDVYFPHDATPNFGYESNYDRETMLRLF 185

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K++P D +LW+ + P EP WE+  G GRPGWHIECS ++   L   FD+
Sbjct: 186 AERGGDPDRPGKRDPLDALLWRMARPGEPSWETSIGTGRPGWHIECSHIALANLDTPFDL 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL+FPHHE   A +         A  + H G + L+G KMSKS GN + +++L  
Sbjct: 246 QGGGSDLVFPHHEYSAAHAEALTGQHPFARHYAHAGMIGLDGEKMSKSRGNLVFVSKLRS 305

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIID 348
           T           VIRLA+   HYRE   +T +   EA   L+ W   +      S   + 
Sbjct: 306 T------GVDPGVIRLALFAGHYREDRPWTDELFAEAGTRLALWRSAADLESGPSVDDVV 359

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFN-ASAHILGI 394
             V   L NDL+T  A+ AL   ARE+      + +   +F  A   +LGI
Sbjct: 360 ARVREHLGNDLDTPKALAALDAWAREAWDRGGPDTEAPGVFRTAVDALLGI 410


>gi|13357680|ref|NP_077954.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761946|ref|YP_001752206.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508782|ref|ZP_02958248.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|24418701|sp|Q9PR21|SYC_UREPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|11271610|pir||H82930 cysteinyl-tRNA synthetase UU123 [imported] - Ureaplasma urealyticum
 gi|6899081|gb|AAF30529.1|AE002113_3 cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827523|gb|ACA32785.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675727|gb|EDT87632.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
          Length = 436

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 148/462 (32%), Positives = 224/462 (48%), Gaps = 51/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV NITDIDDKII  A   +           ++     +++K    L  L     P+
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKEL------EVSEYYFNEYLKIKKALNTLE-MINPK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R+    +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DFILWK++      W +PWG GRPGWH ECS + + Y+G+   IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKG-IMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL         +  
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIID--P 349
            V+R       Y++PI F+ + + + E  + K                   S   ID   
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNNQLKSLTQIDHFE 339

Query: 350 AVLSALYNDLNTVSAIQALH-------KLARESTKNHDL---LPIFNASAHILGIEVCKE 399
                + +DL+ V  +  +H        L +E+   ++L   L        ILGI     
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKENKDMNELKLNLTQLLYMLDILGINFVDL 399

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H ++N+      L+      +  K +  AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|227542084|ref|ZP_03972133.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
 gi|227182135|gb|EEI63107.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
          Length = 442

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 128/412 (31%), Positives = 207/412 (50%), Gaps = 36/412 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            + +Y++ + +I   + +    +  MYVCG T YD  H+G+A   + FD++YR L+    
Sbjct: 48  PLNLYDSADDRI---KPVKAGKVATMYVCGITPYDATHLGHAATYLAFDLIYRQLKA--N 102

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++      N     + +     F  D  +L+   P   
Sbjct: 103 GHDVHYVQNVTDVDDPLFERAERD------NVDWRELGTSQIDLFRSDMEKLSVFPPQDF 156

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQ----K 174
                 + ++I ++Q +I  G  Y  ++    ++    ++   +G  SR   +E      
Sbjct: 157 VGVQEAVDEVIDMVQELIDKGVVYAIDDPEYPDLYVRVNATEQFGYESRFSREEMLDVFA 216

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                PE+  K++P D ++WK + P EP W++P+G GRPGWHIECSA++ + L   FDI 
Sbjct: 217 ERGGDPERPGKEDPLDALVWKMARPGEPSWDAPFGAGRPGWHIECSAIARNRLSVPFDIQ 276

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++LLE 
Sbjct: 277 GGGRDLVFPHHEFSAAHAEAATGEPRMAGHYVHGGMIALDGVKMSKSLGNLVFVSKLLE- 335

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID 348
                       IRL++   HYR   DF+   L + E L+ +       P T      + 
Sbjct: 336 -----EGHTPAAIRLSVFSGHYRADRDFSGAILKQCESLVERLRASVDKPSTRAEAEALV 390

Query: 349 PAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLP---IFNASAHILGIEV 396
             +  AL +DL+T  AI A+   A RE T + D      + +A   +LGI++
Sbjct: 391 TEIREALADDLDTPRAIAAIEAWANREWTGDSDPEAGRIVASALDALLGIKL 442


>gi|198426695|ref|XP_002130035.1| PREDICTED: similar to cysteinyl-tRNA synthetase 2
           (mitochondrial)(putative) [Ciona intestinalis]
          Length = 523

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 141/515 (27%), Positives = 212/515 (41%), Gaps = 90/515 (17%)

Query: 2   KKKIKIYNTLE--RKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRL 56
              IK+ N+    R+      +   DP ++  Y CGPTVYD  HIG+A   I FD + R+
Sbjct: 25  DTGIKVKNSYGCLRQQKALAPLIVADPKHVTWYACGPTVYDKTHIGHASSYIRFDTIRRI 84

Query: 57  LRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           L  Y+G   ++ V  IT+IDDKII RA        +N     +      +F  D   L  
Sbjct: 85  LTNYFGL-TISMVMGITNIDDKIITRANL------LNKEFLSMAEHYENEFKTDLLNLNI 137

Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           L P    R +  +P+++  I  ++   HAY +    + FD       G          + 
Sbjct: 138 LPPIAYVRVSEIVPELLSFIYRLLEQRHAYVSKQGNVWFDVDQFTKVGKLVPI----HQE 193

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
                    K+   DF LWK + P EP WE+PWG+GRPGWH+ECS ++S Y GK  DIH 
Sbjct: 194 WKESDSGGEKRCARDFALWKAAKPGEPYWEAPWGKGRPGWHLECSTIASLYFGKQIDIHS 253

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           G  DL FPHHE+EI QS      E+ AN ++H+G L     KMSKS GN + ++E L   
Sbjct: 254 GASDLEFPHHESEILQSEAFHCEEQWANYFLHSGLLKFGKSKMSKSLGNVVNVDEAL--- 310

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIIDP 349
               +     V+R   L T +   + +T + +   +  +          Q      I   
Sbjct: 311 ----KRHSPDVLRYLCLSTAWHTNLSYTSKDIKHVKASIQLLKTFLSKCQQYVQGNIETK 366

Query: 350 AVLSA----------------LYNDLNTVSAIQALHKLARESTKN--------------- 378
              SA                + ND +T   ++AL +L     K                
Sbjct: 367 NFDSAAIYHSLDTCKSEVYVCMCNDFDTPGVLRALKQLCYSVEKTFGEQIVVENWEPGNH 426

Query: 379 -HDLLPIFNASAHI------LGIEVCKEH--------LNKNISIAIEKLVQERLILLK-- 421
             +  P      ++      LG +               K     +E+L++ R  + K  
Sbjct: 427 VRNTKPFVEVMTYVTETFTNLGFQSISAAHTDSNPDITAKGQDDILEELLKFRAKVRKLA 486

Query: 422 ----------MKK--FSSADYIRKQLESKGFILED 444
                     +K+  F   DY+R +L +KG  ++D
Sbjct: 487 MSSNKTSDDGLKQLLFKECDYLRNELSNKGISIKD 521


>gi|301108884|ref|XP_002903523.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262097247|gb|EEY55299.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 678

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 145/546 (26%), Positives = 220/546 (40%), Gaps = 130/546 (23%)

Query: 16  TEF---QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
             F    ++ P+ ++ Y CGPTVYD AH+G+AR  +  D+L R+     G   V  V  +
Sbjct: 38  EPFPRGTSVTPNILKWYACGPTVYDKAHLGHARAYVSQDILRRVAERTGGYN-VQLVMGV 96

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
           TD+DDKII+RA+++      N +   +  +  QQF  D  RL    PT   R + H+P++
Sbjct: 97  TDVDDKIIKRAKEQ------NVSFHTLAWEQEQQFFADMARLYVKPPTAITRVSEHLPEI 150

Query: 133 IYLIQNIILHGHAYEA--NNEIIFDTSSIPN-YGSFSRRKI----DEQKMGTRVPEKYH- 184
           +  I+ I   G AY+A   + + F+T  + + YG    R+     ++ +       +   
Sbjct: 151 VKYIEEIQHKGFAYQAVDGSGVYFNTRQLGDKYGKLDPRRQTQRDEQLQTEAEAAVEESD 210

Query: 185 --------KKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
                   K++P DF LWK +  P EP W SPWG GRPGWHIECSAM+ H LG   D+H 
Sbjct: 211 VAEEEEKVKRDPRDFALWKAAKEPDEPAWPSPWGLGRPGWHIECSAMTHHVLGDRLDVHT 270

Query: 236 GGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           GG+DL FPHH NEIAQ    +        EK  N ++H G L + GRKMSKS  NFI++ 
Sbjct: 271 GGVDLRFPHHNNEIAQCEAHNHGPQCGHDEKWCNHFVHFGHLYIRGRKMSKSLKNFISVR 330

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------- 338
           + L           A   RL  L   YR  + ++  R+ +AE    +             
Sbjct: 331 DFL------AEGHTADHFRLFCLQFKYRASLVYSEDRVRDAEATAGRLRGFFRSVVAYGS 384

Query: 339 -------------------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
                                    +   +       V +AL +DL+T  A+  + +L  
Sbjct: 385 GHDMSSSSHTETLETKSKRCEQVDLELLDALFETRALVDAALLDDLDTPRALSLVLELVS 444

Query: 374 ESTKNH---------------DLLPIFNASAHILGIEVCKEHLN---------------- 402
                                 L         + G+E      +                
Sbjct: 445 RGNAYLLAQRGDLGAPDEVLISLTGYVLEVLELFGLEGLHSEFSAMLRRRFTAFGHPETQ 504

Query: 403 ------------KNISIAIEKLVQERLILLK-----------MKKFSSADYIRK-QLESK 438
                        +    I  L+Q R  + +            +  +  D +R  +L   
Sbjct: 505 RELDGRHELVSRDDQEALIRSLLQFRASVREEALRDPKQPGNARVLALCDALRNEELPQL 564

Query: 439 GFILED 444
           G  +ED
Sbjct: 565 GIQIED 570


>gi|302561530|ref|ZP_07313872.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
 gi|302479148|gb|EFL42241.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
          Length = 409

 Score =  366 bits (940), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 126/408 (30%), Positives = 200/408 (49%), Gaps = 33/408 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T      +   +DP  + R+YVCG T YD  HIG+A     FD++ R+     
Sbjct: 17  RDLRIHDTATG---DLVTLDPGPVARIYVCGITPYDATHIGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  L P  
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAERDGLDW------TALAERETALFREDMTALRMLPPRQ 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G  YE + +I F   + P++G  S       ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRELGATYELDGDIYFSVEADPHFGEVSHLDAAAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KK+P D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPERPGKKDPVDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L     
Sbjct: 246 GSDLVFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSTLRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAV 351
                     IRLA+L  HYR   ++T Q L +A   L  W    +         +   +
Sbjct: 304 ----GVDPAAIRLALLAHHYRADWEWTDQVLQDAVTRLDHWRAAVSRPDGPPADALVEEI 359

Query: 352 LSALYNDLNTVSAIQALHKLA--RESTKNHDLLP---IFNASAHILGI 394
             AL  DLN  +A+ A+ + A  +E +   D+     +  A   +LG+
Sbjct: 360 REALAGDLNAPAALAAVDRWAVLQEESGGTDIGAPGVVSRAVDALLGV 407


>gi|124002858|ref|ZP_01687710.1| cysteinyl-tRNA synthetase [Microscilla marina ATCC 23134]
 gi|123992086|gb|EAY31473.1| cysteinyl-tRNA synthetase [Microscilla marina ATCC 23134]
          Length = 568

 Score =  366 bits (940), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 123/289 (42%), Positives = 160/289 (55%), Gaps = 12/289 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +KI NTL      F+ ++P  + MYVCGPTVY+  HIGNARP + FDVL R L Y   
Sbjct: 12  PPLKIQNTLTNTKEVFEPLNPPFVGMYVCGPTVYNNPHIGNARPAVFFDVLSRYLTYLGY 71

Query: 63  EKCVTYVRNITDIDDKI----IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
           +  V YVRNITD+            R    +         I +  T ++++    L    
Sbjct: 72  K--VRYVRNITDVGHLTGSENDGEDRISKQAKLEQLEPMEIVNIYTNKYLELMDALNVKR 129

Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKM 175
           P+  P AT HI + I  +Q I+  G AYE+   + FD        NYG  S R IDE   
Sbjct: 130 PSISPTATGHIVEQIDTVQKILDAGLAYESEGSVYFDVKKYNERHNYGELSGRVIDELLA 189

Query: 176 GTRV--PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            TR     +  KKNP DF +WK+++P     W SPWG G PGWH+ECS MS+ YLG+ FD
Sbjct: 190 NTRENLEGQSEKKNPMDFAIWKKASPEHLMRWNSPWGEGFPGWHLECSVMSTKYLGEQFD 249

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           IHGGG+DL+FPHHE EIAQ+  A+  +     W+HN  L ++G KMSKS
Sbjct: 250 IHGGGMDLMFPHHECEIAQAKAANGGKAPVKYWMHNNMLTIDGVKMSKS 298



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 81/211 (38%), Gaps = 40/211 (18%)

Query: 279 SKSNGNFITINELL-ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           ++   NFITI E+     +   +++    IRL +L  HYR  IDF+ + L +A+    K 
Sbjct: 358 AQEFVNFITIEEVFTGEHEILAQAYSPMTIRLFILQAHYRSTIDFSNKALLDAQKAYKKL 417

Query: 338 PQ-------------TSTSKGIIDPAV-------LSALYNDLNTVSAIQALHKLARESTK 377
                            T    +D  +       L ++ +D+NT  A+  +  + ++   
Sbjct: 418 MNSLRVLKLMEYPTAAGTLNTKLDQQINGFCDNALRSMNDDMNTAKALAQIFNINKKINH 477

Query: 378 NH----DLLPIFNASA------------HILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
            +    D+  I  A+              + G+   +E  NK   + I+ ++       +
Sbjct: 478 FYTHPQDIATIEKATFDRMKSFFITFIVDVFGL--IEEKTNKQ-EVLIQGMLDLYKDAKE 534

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            K +   D IR   +  G +++D K   +  
Sbjct: 535 NKDYDKVDQIRTTFKESGLLIKDLKTGVDWA 565


>gi|41407974|ref|NP_960810.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|61216571|sp|Q73YS9|MSHC_MYCPA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|41396328|gb|AAS04193.1| CysS2 [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 415

 Score =  366 bits (939), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 125/411 (30%), Positives = 197/411 (47%), Gaps = 33/411 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI--RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            ++++Y+T +R++    A         MYVCG T YD  H+G+A   + FD++YR  ++ 
Sbjct: 17  PELRLYDTSDRQVRPVAAGAGPGSAATMYVCGITPYDATHLGHAATYLAFDLIYR--QWL 74

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V YV+N+TD+DD ++ERA ++            +  +    F +D   L  LAP 
Sbjct: 75  DLGHDVHYVQNVTDVDDPLLERAARD------GVDWRALAEREVSLFREDMAALRILAPR 128

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQ---- 173
               AT  I  ++ L++ ++  G AY  +    +I +   +   +G  S    +      
Sbjct: 129 DYVGATEAIADVVELVEKMLASGAAYVVDGEFPDIYYRADATLQFGYESGYDRETMLRLF 188

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   DI
Sbjct: 189 AERGGDPQRPGKTDALDALLWRAARPGEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDI 248

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + +++L  
Sbjct: 249 QGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLR- 307

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
                GR      IRL +L  HYR    ++ Q L EA   L +W   +      D     
Sbjct: 308 -----GRGVEPAAIRLGLLAGHYRGDRYWSDQVLDEATARLRRWRTATALPAGPDATDVI 362

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGI 394
             V   L +DLNT  A+ AL     ++     HD      + +A   +LG+
Sbjct: 363 ARVRQYLADDLNTPKALAALDGWTTDALDYGGHDTAAPRLVASAVDALLGV 413


>gi|331697134|ref|YP_004333373.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Pseudonocardia dioxanivorans CB1190]
 gi|326951823|gb|AEA25520.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Pseudonocardia dioxanivorans CB1190]
          Length = 412

 Score =  366 bits (939), Expect = 6e-99,   Method: Composition-based stats.
 Identities = 121/412 (29%), Positives = 200/412 (48%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++++T   ++            MYVCG T YD  H+G+A   + FD++ R  R    
Sbjct: 17  PPLRLHDTSTGRVRPTAP--GPEATMYVCGITPYDATHLGHAATYLAFDLVNRYWRDLG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TDIDD ++ERA ++       D   ++  + T  F +D   L  + P H 
Sbjct: 74  -HDVHYVQNVTDIDDPLLERAARDQ------DDWVVLGMRETALFREDMEALRVVPPRHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
             A   + ++   +  ++  G AY  ++    ++ FD+++  ++G  S          +R
Sbjct: 127 IGAVEAMGEIAEFVGKLLAGGSAYRIDDPEFPDVYFDSTASGHFGYESNYDEQTMIALSR 186

Query: 179 V----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K++PAD +LW+ +   EP WES  G GRPGWH+EC+A++ + LG   D++
Sbjct: 187 ERGGDPDRPGKRHPADALLWRMAREGEPSWESDLGAGRPGWHVECAAIALNRLGDQIDLN 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +     +   A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEFGAAHAEAHTGVHPFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLRAD 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                       +RLA+L  HYR    +T   L  A+  L++W +  T     D      
Sbjct: 307 D------VDPNAVRLALLSGHYRTDRAWTDDLLEAAQQRLARWREAVTLDAGPDATETVA 360

Query: 350 AVLSALYNDLNTVSAI-----QALHKLARESTKNHDLLPIFNASAHILGIEV 396
            + + L +DL+T  A+      A   L R  T       I  A   +LG+++
Sbjct: 361 NLRAHLADDLDTPRALAAVDAWAGAALERRGTDAAAPATIRTAVDALLGVKL 412


>gi|325185588|emb|CCA20071.1| cysteinyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 656

 Score =  365 bits (938), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 149/539 (27%), Positives = 216/539 (40%), Gaps = 116/539 (21%)

Query: 8   YNTLERKITEFQAIDPSNIR--------------MYVCGPTVYDFAHIGNARPMIVFDVL 53
           +N+L R + +        +                Y CGPTVYD AH+G+AR  +  D++
Sbjct: 26  WNSLTRSLQQVVPPIDHKLGGKQSDIEDTSCIRKWYACGPTVYDRAHLGHARAYVSQDII 85

Query: 54  YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
            R++   +G      V  +TDIDDKII+RA++             +      QF  D  R
Sbjct: 86  RRIIERQFG-ISFFLVMGVTDIDDKIIQRAKERQIHYL------ELARAEESQFFYDLDR 138

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN--EIIFDTSSIP-NYGSF--SRR 168
           L    P    R + H+ ++I  I+ I+L+G AY A++   + FDT  +   YG    S+ 
Sbjct: 139 LGVRRPHAVTRVSEHVEEIIRFIERIVLNGFAYIASDVSGVYFDTEQLGTEYGKLDPSQG 198

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTP--MEPGWESPWGRGRPGWHIECSAMSSHY 226
              E        +   KKNP DF+LWK       EP WESPWG GRPGWHIECSAM  + 
Sbjct: 199 SSVEAVELMYESKDSIKKNPKDFVLWKTVKEPQNEPCWESPWGLGRPGWHIECSAMIHYV 258

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADR------------IEKTANIWIHNGFLNLE 274
           LG   D+H GG+DL FPHH NEIAQS   +              E     ++H G L ++
Sbjct: 259 LGDKIDLHTGGIDLRFPHHNNEIAQSEAHNYPQNKTCCSVHQINEPWCRHFLHFGHLYIQ 318

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G+KMSKS  NF TI   LE          A   R+  L   YR  I ++ +R+ +A   +
Sbjct: 319 GQKMSKSLKNFTTIEAFLEKH-------TADQFRVFCLQYKYRSNIHYSSERMRDAAAFI 371

Query: 335 SKW---------------PQTSTSKGIIDPAVLSA-----------LYNDLNTVSAIQAL 368
            K                 + S     +D  +L A           L +D +T SA+Q +
Sbjct: 372 DKLCNFFRNVEAYSSHESSEASKKCTDLDLEILKALFHAKERVSICLADDFDTPSALQHI 431

Query: 369 HKLARESTKNH-------------DLLPIFNASAHILGIEVCKEH--------------- 400
            K+   + +                +         + G+    E                
Sbjct: 432 SKMVSRANEYLLTRQEHNPIEIRMAIAQYVLDVLELFGMRQLYEEFAHLGDQKVIRKISD 491

Query: 401 -----------LNKNISIAIEKLVQERLILLKMKK---FSSADYIR-KQLESKGFILED 444
                      L+  +   ++   Q R   L+          D  R   L S G  L+D
Sbjct: 492 SERRSESSGIRLDGLMQAVVDFRAQVRQRALEEGSSSILELCDAFRNDALPSLGIQLKD 550


>gi|86741333|ref|YP_481733.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
 gi|123723762|sp|Q2J9N8|MSHC_FRASC RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|86568195|gb|ABD12004.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 464

 Score =  365 bits (938), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 121/379 (31%), Positives = 185/379 (48%), Gaps = 25/379 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K ++I++T    + E         R+YVCG T YD  H+G+A   + +D+  R+LR    
Sbjct: 41  KPLRIFDTATSSVRELAPAV--TARLYVCGITPYDATHLGHAFTYLTYDLAQRVLRDAG- 97

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD ++ERA ++            +  +    F +D T L  LAP   
Sbjct: 98  -HHVHYVQNVTDVDDPLLERATRDGLDW------RALADREIDLFREDMTALRMLAPDAY 150

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTR 178
                 IP ++ ++  ++  G AY+ ++++ F  ++ P +G  S     E          
Sbjct: 151 VGVVEAIPMIVDMVVELVDRGAAYQVDDDLYFSIATAPAFGEISHLSRAEMLAICAERGG 210

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P +  KK+P D +LW+   P EP W SP+G GRPGWHIECSA++ HYLG V DI GGG 
Sbjct: 211 DPRRTGKKDPLDPLLWRAHRPGEPSWPSPFGPGRPGWHIECSAIARHYLGGVIDIQGGGT 270

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHE   A +  A  I   A  ++H   ++L+G KMSKS GN   ++ L       
Sbjct: 271 DLSFPHHECSAAHAEVAAGIRPFARSYVHTAMVSLDGHKMSKSRGNLEFVSRLRRA---- 326

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLS 353
                   +RLA+L   + E  ++T   L +A   +++W          D      AV  
Sbjct: 327 --GVDPAALRLALLDHRHTEDWEWTPGLLDDAVDRMNRWRAAVALPTGPDAMGLLAAVRE 384

Query: 354 ALYNDLNTVSAIQALHKLA 372
            L +DL+   A+ A+    
Sbjct: 385 RLADDLDAPGAVAAVDAWV 403


>gi|171920288|ref|ZP_02691052.2| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902701|gb|EDT48990.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 436

 Score =  365 bits (937), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 148/462 (32%), Positives = 224/462 (48%), Gaps = 51/462 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+Y++   ++ E   I+   I +Y CGPTVY+  HIGNARP+I  DVLYR L+ +    
Sbjct: 1   MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
              YV NITDIDDKII  A   +           ++     +++K    L  L     P+
Sbjct: 56  KTKYVLNITDIDDKIINYALANNLKEL------EVSEYYFNEYLKIKKALNTLE-MINPK 108

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            + H+ ++I  IQ +I     Y   +++ FDT    NYG  S+R ++   +G R+    +
Sbjct: 109 VSTHMDKIIDYIQKLIYKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESVAN 168

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K NP DFILWK++      W +PWG GRPGWH ECS + + Y+G+   IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKG-IMWNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           HENE AQ+      +  A +W+H G +N+   KMSKS  NFI + +LL         +  
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNVNNEKMSKSLNNFILVKDLLA-------EYDY 279

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIID--P 349
            V+R       Y++PI F+ + + + E  + K                   S   ID   
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNNQLKSLTQIDHFE 339

Query: 350 AVLSALYNDLNTVSAIQALH-------KLARESTKNHDL---LPIFNASAHILGIEVCKE 399
                + +DL+ V  +  +H        L +E+   ++L   L        ILGI     
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKENKDMNELKLNLTQLLYMLDILGINFVDL 399

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H ++N+      L+      +  K +  AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436


>gi|222834518|gb|EEE72995.1| predicted protein [Populus trichocarpa]
          Length = 241

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 127/249 (51%), Positives = 155/249 (62%), Gaps = 8/249 (3%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   + +YN+L RK    +   P  + MYVCGPTVY+FAHIGNARP +VFDVL RLLR  
Sbjct: 1   MTSALSLYNSLTRKKEPLRTGQPGRVTMYVCGPTVYNFAHIGNARPAVVFDVLARLLREQ 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           Y E  V Y RN TD+DDKI   A  E   I        IT++    + +D   L  L P 
Sbjct: 61  YAE--VVYARNFTDVDDKINASAAAEGVPIG------TITARYIDAYHEDMRALGVLIPD 112

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
            +PR T HIP +I LIQ +I +G+AY   + ++F   S P YG  S R+ ++   G RV 
Sbjct: 113 LEPRVTEHIPAIIALIQRLIANGNAYVEQDHVLFHVPSFPAYGQLSGRRPEDMLAGVRVD 172

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
              +K++P DF+LWK ST   PGW SPWGRGRPGWHIECSAM   +LG   DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTAEVPGWPSPWGRGRPGWHIECSAMIGQHLGSTIDIHGGGQDL 232

Query: 241 IFPHHENEI 249
           IFPHHENEI
Sbjct: 233 IFPHHENEI 241


>gi|254823397|ref|ZP_05228398.1| cysteinyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 400

 Score =  364 bits (935), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 126/409 (30%), Positives = 200/409 (48%), Gaps = 33/409 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T +R++        S   MYVCG T YD  H+G+A   + FD++YR  ++   
Sbjct: 6   PELRLYDTSDRQVRPVA--SGSTATMYVCGITPYDATHLGHAATYLAFDLIYR--QWLDL 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD ++ERA ++            +  +    F +D T L  LAP   
Sbjct: 62  GHDVHYVQNVTDVDDPLLERAERD------GIDWRELAQREVSLFREDMTALRMLAPREY 115

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQ----KM 175
             AT  I +++ L++ ++  G AY       +I +   + P +G  S    +        
Sbjct: 116 VGATEAIAEVVELVEKMLASGAAYVVEGEYPDIYYRADATPQFGYESGYDRETMLRLFSE 175

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   DI G
Sbjct: 176 RGGDPQRPGKTDQLDALLWRAARPGEPSWPSPFGDGRPGWHVECAAIALSRIGSGLDIQG 235

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ L    
Sbjct: 236 GGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTLR--- 292

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
               +   A  IRL +L  HYR    ++ Q L EA   L +W   +      D A     
Sbjct: 293 ---AQGVEAAAIRLGLLAGHYRGDRYWSQQVLDEAVARLQRWRTATALPTGPDAADVIAR 349

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGI 394
           V   L +DL+T  A+ AL   + ++ +   HD      +  A   +LG+
Sbjct: 350 VRQYLADDLDTPKALAALDGWSTDALEYGGHDAEAPRLVATAVDALLGV 398


>gi|311899990|dbj|BAJ32398.1| putative ATP-dependent L-cysteine--1D-myo-inosityl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase
           [Kitasatospora setae KM-6054]
          Length = 409

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 122/355 (34%), Positives = 175/355 (49%), Gaps = 19/355 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            ++IY+T    + E     P   R+YVCG T YD  H+G+A     FD++ R+ +     
Sbjct: 18  PLRIYDTATSSVREVVPTGP-TARLYVCGITPYDATHLGHAATYTTFDLVQRVWKDAG-- 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD ++ERA      +      +++  + T  F +D T L  L P H  
Sbjct: 75  HDVLYVQNVTDVDDPLLERA------VATGQDWTVLAERETALFREDMTALRMLPPAHYI 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRV 179
            A   IP ++ L+Q ++  G AYE + ++ F   S P +G  S    ++           
Sbjct: 129 GAVESIPWIVPLVQRLLASGAAYEVDGDVYFSVESDPRFGEVSGLTREQMLPVFAERGGD 188

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           PE+  KKNP D +LW  + P EP WE+  G GRPGWHIEC A++  +LG  FDI GGG D
Sbjct: 189 PERPGKKNPLDALLWLAARPGEPAWETELGHGRPGWHIECVAIALQFLGMDFDIQGGGSD 248

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHE   A +  A      A  ++H G + L+G KMSKS GN + ++ L        
Sbjct: 249 LSFPHHEMGAAHAQVALGEHPYARAYVHAGMVGLDGHKMSKSRGNLVFVSALRRD----- 303

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                  IRLA+L  HYR   ++T   L  A   L+ W    +         L A
Sbjct: 304 -GVDPAAIRLALLAHHYRSDWEWTPADLDTALTRLAAWRDAVSRPDGPSAQALLA 357


>gi|296139847|ref|YP_003647090.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Tsukamurella paurometabola DSM 20162]
 gi|310947226|sp|D5UPJ5|MSHC_TSUPD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296027981|gb|ADG78751.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Tsukamurella paurometabola DSM 20162]
          Length = 414

 Score =  363 bits (933), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 121/410 (29%), Positives = 196/410 (47%), Gaps = 39/410 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++Y+T ++ +    +++P  +  MYVCG T YD  H+G+A   + FD++ R+LR    
Sbjct: 18  PLRLYDTSDQAVR---SVNPGAVSGMYVCGITPYDATHLGHAATYLTFDLINRVLRANGH 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV+N+TD+DD + ERA ++            + ++ T  F +D   L  LAP   
Sbjct: 75  E--VHYVQNVTDVDDPLFERAARD------GIDWRDLGARETDLFCEDMQALRVLAPQDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
             A   I ++I L+  ++ +G AY  ++    ++ + T +   +G  S       +    
Sbjct: 127 IGAVESIDEVIALVGRLLENGAAYIVDDPEFPDVYYRTDATEQFGYESGYDRATMERFFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K++P D +LW+ + P EP W SP G GRPGWHIEC+A++ + LG  FDI 
Sbjct: 187 ERGGDPDRPGKRDPLDALLWRAARPGEPSWPSPQGPGRPGWHIECAAIAQNRLGVGFDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A         + A  ++H   + L+G KMSKS GN + ++ L   
Sbjct: 247 GGGSDLIFPHHEFSAAHVEADTGERRFARHYVHAAMIGLDGEKMSKSRGNLVFVSTLRRA 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
                       IRL +   HYR    ++ + L  A+  L  W     +    D A    
Sbjct: 307 ------GVDPAAIRLGLFEGHYRTDRAWSDEVLARAQARLDLWRNAFAAASSPDGAELVG 360

Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKN--------HDLLPIFNASAHI 391
            +   L +DL+T  A+ AL   A  +  +          +    +A   +
Sbjct: 361 RLRRYLADDLDTPKALSALDAWAHRAVTSGGPDPDGPSTVATAVDALLGV 410


>gi|296117896|ref|ZP_06836479.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium ammoniagenes DSM 20306]
 gi|295969127|gb|EFG82369.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium ammoniagenes DSM 20306]
          Length = 420

 Score =  363 bits (931), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 124/417 (29%), Positives = 202/417 (48%), Gaps = 39/417 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +K+Y++ + KI   + ++     MYVCG T YD  H+G+A   + FDV+YR+L+     
Sbjct: 18  SLKLYDSADEKIKPVR-VEGDTATMYVCGITPYDSTHLGHAATYVTFDVIYRMLQDQG-- 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITD+DD + ERA ++            +       F  D  +L    P    
Sbjct: 75  HKVHYVQNITDVDDPLFERAERD------GVDWRELGESQVDLFRSDMEQLGVYPPQDYI 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK----M 175
            A   I ++I L Q ++ +G AY  ++    ++     +   +G  S    +  +     
Sbjct: 129 GAIESIDEVIDLTQKLLDNGAAYAVDDAKYPDVYASVDATSQFGYESNYDRETMEKFFAE 188

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  KK+P D +LW+ +   EP WESP+G GRPGWH+ECSA++++ LG  F I G
Sbjct: 189 RGGDPDREGKKDPLDALLWRAAREGEPSWESPFGAGRPGWHVECSAIATNRLGSSFLIQG 248

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL +PHHE   A +     +++ A  ++H G + L+G KMSKS GN + +++L+E  
Sbjct: 249 GGSDLKYPHHEYSAAHAEAGLGVDRMAEFYVHAGMIGLDGTKMSKSLGNLVFVHKLVE-- 306

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------ 343
               +   A  IRL +   HYR   D++ + L+ A   L+ W                  
Sbjct: 307 ----QGAEASAIRLGLYAHHYRGDRDWSDEVLSTAVERLNTWRTAVAETDDADASIDAAA 362

Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
                     A+   L NDL+TV A+  + + A++ T       +  A   +LG+ +
Sbjct: 363 AQQAAEETVQALREYLANDLDTVGALNVIDEWAKKPTTAEAAGVVATAVDGLLGVRI 419


>gi|302533542|ref|ZP_07285884.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. C]
 gi|302442437|gb|EFL14253.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. C]
          Length = 409

 Score =  362 bits (930), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 120/369 (32%), Positives = 184/369 (49%), Gaps = 28/369 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T  +       + P  + R+YVCG T YD  HIG+A     FD++ R+     
Sbjct: 17  RDLQIHDTATQGT---ITLAPGPVARLYVCGITPYDATHIGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +      + +  + T  F +D T L  L P H
Sbjct: 72  NKRQVHYVQNVTDVDDPLLERA------LRDGHDWTELAERETALFREDMTALRMLPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE + ++ F   + P++G  S       +  +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVEADPDFGGVSHLDAAAMRALSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FDI GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALEHLGMGFDIQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSALRRA-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAV 351
                     IRLA+L  HYR   ++T   L +AE  L++W    +    +        V
Sbjct: 304 ----GVDPAAIRLALLAHHYRANWEWTDDVLAQAEARLARWRAAVSRPDGLPAEALVEEV 359

Query: 352 LSALYNDLN 360
            +AL +DLN
Sbjct: 360 RAALADDLN 368


>gi|108800119|ref|YP_640316.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119869247|ref|YP_939199.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126435744|ref|YP_001071435.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|123070011|sp|Q1B774|MSHC_MYCSS RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947199|sp|A3Q1B7|MSHC_MYCSJ RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|310947200|sp|A1UHV1|MSHC_MYCSK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|108770538|gb|ABG09260.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119695336|gb|ABL92409.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126235544|gb|ABN98944.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 415

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 120/415 (28%), Positives = 199/415 (47%), Gaps = 34/415 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y++ +R++            MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 17  PQLRLYDSADRQVRPVS--AGDTATMYVCGITPYDATHLGHAATYLAFDLVHRLW--LDA 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+NITD+DD + ERA ++            + ++  Q F +D   L  L P   
Sbjct: 73  GHRVHYVQNITDVDDPLFERAARD------GIDWRDLGAREIQLFREDMAALRVLPPHDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQ----K 174
             AT+ I ++I L++ ++  G AY  ++    ++ +   +   +G  S    +       
Sbjct: 127 VAATDAIAEVIELVEKMLASGAAYVVDDPEFPDVYYRADATVQFGYESNYDHETMLTLFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +  D +LW+   P EP W SP+G GRPGWH+EC+A++   +G   DI 
Sbjct: 187 ERGGDPDRAGKADELDALLWRAERPGEPSWPSPFGPGRPGWHVECAAIALSRIGTGLDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A +       + A  ++H G +  +G KMSKS GN + ++ L   
Sbjct: 247 GGGSDLIFPHHEFSAAHAESVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSRLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----P 349
                       IRL +L  HYRE   ++   L++A+  L +W + ++     D      
Sbjct: 305 ----AEGVDPSAIRLGLLAGHYREDRFWSDDVLSDAQTRLQRWRRATSLPTGPDATDVLA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEVCKE 399
            V + L +DL+T  A+ AL     E+      D+     +  A   +LG+ +  E
Sbjct: 361 RVRTYLADDLDTPKALIALDAWCTEALDGGGSDVTAPKTVATAVDALLGVALPVE 415


>gi|262202368|ref|YP_003273576.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Gordonia bronchialis DSM 43247]
 gi|310947185|sp|D0LDR0|MSHC_GORB4 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|262085715|gb|ACY21683.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Gordonia bronchialis DSM 43247]
          Length = 413

 Score =  362 bits (929), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 126/411 (30%), Positives = 191/411 (46%), Gaps = 34/411 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +++Y+T +R +            +YVCG T YD  H+G+A   + FD + R+LR   
Sbjct: 16  SPALRLYDTADRAVRPVAP--GPTATLYVCGITPYDATHLGHAATYVTFDQVNRVLRDQG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITD+DD + ERA ++            + S+  Q F  D T L  L P  
Sbjct: 74  --HDVHYVQNITDVDDPLFERAERD------GVDWRELGSEQIQLFRDDMTALRVLPPRD 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK--- 174
              A   + ++I  ++ ++  G AY  ++    ++ F T +   +G  S           
Sbjct: 126 YIGAMESVDEVIEAVEKLLASGAAYVVDDPEYPDVYFRTDATEQFGYESGYDRATMARFF 185

Query: 175 -MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K++P D +LW+ +   EP WE+P+G GRPGWHIECSA++ + LG  FDI
Sbjct: 186 AERGGDPDRAGKRDPLDAVLWRAARDGEPSWEAPFGPGRPGWHIECSAIALNRLGIEFDI 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A         + A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 246 QGGGNDLIFPHHEFSAAHGEALTDSRRFARHYVHTGMVGLDGEKMSKSRGNLVFVSVLRR 305

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                        IRLA+L  HYR    +T   L  A   L +W   + +    D A   
Sbjct: 306 D------GVDPAAIRLALLADHYRSDRMWTDDVLATAVDRLQRWRTAAAAPAGPDAAPTV 359

Query: 354 A-----LYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGI 394
           A     L +DL+T  A+ A+     +      +       I  A   +LG+
Sbjct: 360 ARLRQHLADDLDTPKALDAVDAWCADVRTGIGSDPAAPAQIARAVDALLGV 410


>gi|117928379|ref|YP_872930.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|310947169|sp|A0LU34|MSHC_ACIC1 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|117648842|gb|ABK52944.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 403

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 124/398 (31%), Positives = 199/398 (50%), Gaps = 27/398 (6%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++T  R++    +       MYVCG T YD  H+G+A   + FD+L R    +     V
Sbjct: 21  LFDTASRRLVTVGSQQG--ASMYVCGITPYDATHLGHAATYVAFDLLVRTW--HDAGVTV 76

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y +N+TD+DD ++ERARQ      ++     I ++ T +F  D   L  + P       
Sbjct: 77  RYAQNVTDVDDPLLERARQ------VDQPWEAIAARETAKFRADMAALRVVPPDRYVGVV 130

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVPEK 182
             +PQ+I LI+ +   G  YE + +  F T +IP++G+ S    D+           P++
Sbjct: 131 ESLPQIIGLIEVLRSRGLTYELDGDQYFATHAIPDFGAVSHLGRDDMIALFAARGGDPDR 190

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             KK+P D +LW+   P EP W +P+GRGRPGWH+EC+A++  +L    D+ GGG DL+F
Sbjct: 191 AGKKDPLDALLWRGKRPEEPSWPAPFGRGRPGWHVECAAIALTHLPLPLDVQGGGADLVF 250

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHH+   AQ+  A    + A  ++H G +  +G KMSKS GN + +++L           
Sbjct: 251 PHHDMTAAQAEAATG-RRFARAYVHTGLVAYQGEKMSKSLGNLVFVSDLCAA------GA 303

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAVLSALYN 357
               +RLA+L  HYR   ++T + L EA   L++W              +  AV   L +
Sbjct: 304 DPMAVRLALLDHHYRTEWEWTPRLLDEATDRLAEWRAAVRRPRGAPGDGLLAAVRDRLAD 363

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAH-ILGI 394
           DL+   AI  + +   +   + D   +  A A  +LG+
Sbjct: 364 DLDAPGAIALIDEWTTQDGDDPDAPTLVAAMADALLGV 401


>gi|110004174|emb|CAK98512.1| probable cysteinyl-trna synthetase protein [Spiroplasma citri]
          Length = 445

 Score =  361 bits (928), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 144/464 (31%), Positives = 216/464 (46%), Gaps = 46/464 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YNTL R  T++       I +Y CGPTVY++ HIGNAR +I  D+L   L++   E 
Sbjct: 1   MKLYNTLTRNFTDYS--QTKKINIYGCGPTVYNYIHIGNARAIITVDLLVSFLQFQQIE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y++N TDIDDKII +A  EH           I     + F +D   L    PT   R
Sbjct: 58  -VNYIQNYTDIDDKIIAKAAAEHK------TEQEIAEFYIKAFEEDVFNLNVRTPTKWVR 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEKY 183
            T+H+  ++  IQ ++    AYE N  + FD +     YG  + +KI E +   R+    
Sbjct: 111 VTDHVKDIVTFIQKLVKINAAYEVNGSVYFDIAKYQTQYGQLANKKISELEANARIEHDA 170

Query: 184 HKKNPADFILWKRSTPM--EPGWE--SPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGL 238
           +K +  DF LWK++T     P ++      +GRPGWH EC+ +   +   +  DIH GG+
Sbjct: 171 NKHSQYDFALWKQTTEGISFPFYDQKGKLYQGRPGWHTECAVLIDKFFHKETIDIHAGGI 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHENE  Q    +  E  A IW+HNG LN+  +KMSKS  N I + + +      
Sbjct: 231 DLVFPHHENERIQFFAKNNKE-IAKIWMHNGHLNVADKKMSKSLNNTILVRDFI------ 283

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------ST 342
            + + A  +R  +  T+Y +P++ T   +  A+    K  +                  T
Sbjct: 284 -KLYGANTLRYLLYATNYTQPLNVTETLIISAQGETEKIFKVLKAINLYLVEYDLNYNLT 342

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-----ILGIEVC 397
             G     VL+ L N+LN+ + +  + K+ +          +    A      I  I   
Sbjct: 343 QHGHNVKEVLAELANNLNSPNVLNIISKMTKIINTQLRDKKLNLQLASDFYNIIFNIMNF 402

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              L   IS  I K + E +     K F  AD +RK L  K  +
Sbjct: 403 NFKL-PLISSEIRKYLLEWIKSKNNKDFVKADELRKVLVEKDIL 445


>gi|195436238|ref|XP_002066076.1| GK22127 [Drosophila willistoni]
 gi|194162161|gb|EDW77062.1| GK22127 [Drosophila willistoni]
          Length = 491

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/497 (27%), Positives = 210/497 (42%), Gaps = 83/497 (16%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +  Y CGPTVYD AH+G+A   +  D++ R+LR Y+    VT   NITD+DDKII RAR+
Sbjct: 2   VSWYTCGPTVYDSAHLGHASTYVKVDIIQRILRDYFRINLVT-AMNITDVDDKIIRRARE 60

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
              +                +F +D   L    P  +   + +I  +   I  +I +  A
Sbjct: 61  SGCNWLDM------ARAYEAEFREDMLSLNVQPPDIRSHVSANIDNIQRFINELISNEQA 114

Query: 146 YEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPG 203
           Y   +  + FD S   +YG   R  ID         +  HK++ +DF LWK    P EP 
Sbjct: 115 YVTKDYSVYFDVSKAVHYGKLQRADID--SSTEPGEQGTHKRHRSDFALWKAKKFPDEPS 172

Query: 204 WESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           W + WG  GRPGWHIECSA++  + G+  D H GGLDL FPHHENE AQ C     ++  
Sbjct: 173 WPASWGGEGRPGWHIECSAIAGMFFGRRLDFHAGGLDLRFPHHENEEAQCCARYETDQWV 232

Query: 263 NIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
           N W+H G L++ G   KMSKS  N I+++ELL       + + A   R+A L+++YR  +
Sbjct: 233 NYWMHTGQLHVAGDKDKMSKSLKNTISVSELL-------KHYTADEFRMACLLSNYRNAM 285

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIID----------------------PAVLSALYND 358
            ++ Q +  A   L K+                                      +L +D
Sbjct: 286 PYSDQLMITARQTLQKFRNFQADLSAYTSFLKPLKYLDEGALRAQLAHTVNEFDESLRDD 345

Query: 359 LNTVSAIQALHKLA---------RESTKNHD---LLPIFNASAHI-------LGIEVCKE 399
            +T   +  L             +E     +    L +  A+ +         G+   KE
Sbjct: 346 FDTARGLSVLMDQMSSISRCINDQEGNAEQEPAYCLDLLIAAGNFINKVMGDFGLTELKE 405

Query: 400 ------------HLNKNISIAIEKLVQERLILLKM------KK---FSSADYIRKQLESK 438
                        L  + S  +  ++  R  + +       K     +  D +R  L+ +
Sbjct: 406 TESSKSRQQQLSALGLDSSNLVSDILSLRGNIRQQATAQSPKNLQLLAVCDDLRNVLQQQ 465

Query: 439 GFILEDYKNPDNGQRMT 455
           G  + D+K   +    T
Sbjct: 466 GIQVRDHKQGSSWVVAT 482


>gi|315506205|ref|YP_004085092.1| cysteine/1-d-myo-inosityl 2-amino-2-deoxy-alpha-d-glucopyranoside
           ligase [Micromonospora sp. L5]
 gi|315412824|gb|ADU10941.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micromonospora sp. L5]
          Length = 412

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 124/409 (30%), Positives = 195/409 (47%), Gaps = 34/409 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y++  +     +        MYVCG T YD  H+G+A  MI FD++ R+ R    +
Sbjct: 18  SLRLYDSARQGAHPSRP--EGAASMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGLD 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TDIDD ++ERA ++       +   ++  + T  F +D   L  + P H  
Sbjct: 76  --VRYVQNVTDIDDPLLERAERD------GEDWKVLAMRETALFREDMEALRMIPPAHYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM----G 176
            A   IP +   +  ++  G AY  +    ++ FD S+ P +G  S    ++        
Sbjct: 128 GAVESIPDIAEKVLMLLKDGAAYRLDDGTGDVYFDISAAPRFGYESNLTREQMIELFAER 187

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              PE+  K++P D +LW+ +   EP W     G GRPGWHIEC+ ++ + LG   D+ G
Sbjct: 188 GGDPERAGKRDPLDPLLWRGAREGEPSWPGGDLGPGRPGWHIECTVIALNLLGDRIDVQG 247

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A +         A+ ++H G + L+G KMSKS GN + ++ L   K
Sbjct: 248 GGNDLIFPHHECSAAHAERLTGEAPFADHYVHAGMIGLDGEKMSKSQGNLVFVSRLRADK 307

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PA 350
                      +RLA++  HYR    +T   LTEA+  L +W + + +           A
Sbjct: 308 ------VDPMAVRLALMSGHYRSDRSWTDDLLTEAQERLGRWRRAAAAPAGPSGAALLAA 361

Query: 351 VLSALYNDLNTVSAIQALHKLA----RESTKNHDLLPIFN-ASAHILGI 394
           V   L +DL+T  A+ A    A       T +     +F      +LGI
Sbjct: 362 VRERLADDLDTPGALAAADSWAEGALNGVTDDETAPALFRDTVDALLGI 410


>gi|302867391|ref|YP_003836028.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micromonospora aurantiaca ATCC 27029]
 gi|302570250|gb|ADL46452.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micromonospora aurantiaca ATCC 27029]
          Length = 412

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 124/409 (30%), Positives = 196/409 (47%), Gaps = 34/409 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y++  +     +        MYVCG T YD  H+G+A  MI FD++ R+ R    +
Sbjct: 18  SLRLYDSARQGAHPSRP--EGAASMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGLD 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TDIDD ++ERA ++       +   ++  + T  F +D   L  + P H  
Sbjct: 76  --VRYVQNVTDIDDPLLERAERD------GEDWKVLAMRETALFREDMEALRMIPPAHYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM----G 176
            A   IP +   +  ++  G AY  +    ++ FD S+ P +G  S    ++        
Sbjct: 128 GAVESIPDIAEKVLMLLKDGAAYRLDDGTGDVYFDISAAPRFGYESNLTREQMIELFAER 187

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              PE+  K++P D +LW+ +   EP W     G GRPGWHIEC+ ++ + LG   D+ G
Sbjct: 188 GGDPERAGKRDPLDPLLWRGAREGEPSWPGGDLGPGRPGWHIECTVIALNLLGDRIDVQG 247

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A +         A+ ++H G + L+G KMSKS GN + ++ L   K
Sbjct: 248 GGNDLIFPHHECSAAHAERLTGEAPFADHYVHAGMIGLDGEKMSKSQGNLVFVSRLRADK 307

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PA 350
                      +RLA++  HYR    +T   LTEA+  L +W + + +           A
Sbjct: 308 ------VDPMAVRLALMSGHYRSDRSWTDDLLTEAQERLGRWRRAAAAPAGPSGAALLAA 361

Query: 351 VLSALYNDLNTVSAIQALHKLA----RESTKNHDLLPIFN-ASAHILGI 394
           V   L +DL+T  A+ A  + A       T +     +F      +LGI
Sbjct: 362 VRERLADDLDTPGALAAADRWAEGTLNGVTDDETAPALFRDTVDALLGI 410


>gi|291450490|ref|ZP_06589880.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291353439|gb|EFE80341.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 409

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 119/380 (31%), Positives = 191/380 (50%), Gaps = 26/380 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T+               R+YVCG T YD  H+G+A     FD++ R+      
Sbjct: 17  RDLRIHDTVTGGPKTLTP--GPVARLYVCGITPYDATHMGHAATYNAFDLVQRVW--LDT 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           ++ V YV+N+TD+DD ++ERA ++          + +  + T  F +D T L  + P   
Sbjct: 73  KRQVHYVQNVTDVDDPLLERAVRDGVEW------TGLAERETALFREDMTALRMIPPRDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP++I L++ +   G AYE   ++ F   + P++G  S       ++ +     
Sbjct: 127 IGAVEAIPRIIPLVERLRDAGAAYELEGDLYFSVEADPHFGEVSHLDATAMRLLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            PE+  KKNP D +LW  +   EP W+    G+GRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPERPGKKNPLDPMLWMAAREGEPSWDGGSLGQGRPGWHIECVAIALDHLGMGFDLQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHE   + +  A      A+ ++H G + L+G KMSKS GN + ++ L      
Sbjct: 247 SDLVFPHHEMGASHAHAATGEYPFAHSYVHAGMVALDGEKMSKSKGNLVFVSALRRA--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVL 352
                    IRLA+   HYR   ++T   L EA   L++W    +     D       V 
Sbjct: 304 ---GVEPAAIRLALHAHHYRADWEWTDATLQEATRRLARWRAAVSRPDGPDASAVVEQVR 360

Query: 353 SALYNDLNTVSAIQALHKLA 372
           +AL +DL+  +A++A+   A
Sbjct: 361 AALADDLDAPAALRAVDAWA 380


>gi|13432247|sp|Q49784|MSHC_MYCLE RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
          Length = 412

 Score =  361 bits (926), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 125/413 (30%), Positives = 197/413 (47%), Gaps = 33/413 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            ++++Y+T +R++    A         MYVCG T YD  H+G+A   + FD+++RL    
Sbjct: 14  PELRLYDTSDRQVRPVSAAVAPTCKATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDL 73

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V YV+N+TD+DD + ERA +             +  +    F  D   L  L P 
Sbjct: 74  GHE--VHYVQNVTDVDDPLFERADRN------GVDWRDLAEREVALFRDDMASLRILPPH 125

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQ---- 173
               AT  I +++ L+  +++ G AY  ++   +I F   +   +G  S    D      
Sbjct: 126 DYVAATETIVEIVELVDKMLVSGAAYVIDDEYPDIYFRADATLQFGYESGYDRDTMLRLY 185

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
           +     P +  K    D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   DI
Sbjct: 186 EQSGGDPRRPGKNGELDALLWRAARPGEPSWSSPFGPGRPGWHVECAAIALSRIGIGLDI 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A + C     + A  ++H G +  +  KMSKS GN + ++ L  
Sbjct: 246 QGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDEHKMSKSRGNLVLVSTLR- 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +  P   IRL +L  HYR    ++ Q L +A   L +W   ++     D A + 
Sbjct: 305 -----AQGAPPSAIRLGLLAGHYRADRFWSSQLLDDAIARLHRWRTAASMPAGPDVADVI 359

Query: 354 A-----LYNDLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
           A     L +DL+T  AI AL     ++ +   HD      +  A   +LG+++
Sbjct: 360 ARVRGYLADDLDTPKAIAALDGWVTDALEYGGHDAAAPKLLATAIDALLGVDL 412


>gi|227504344|ref|ZP_03934393.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
 gi|227198992|gb|EEI79040.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
          Length = 412

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 126/414 (30%), Positives = 197/414 (47%), Gaps = 36/414 (8%)

Query: 2   KKKIKIYNTL--ERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
              + +Y++     +  E   +      MYVCG T YD  H+G+A   + FD+ YR L  
Sbjct: 16  PHALHLYDSADETIRKVE---VSGETATMYVCGITPYDSTHLGHAATYLTFDLAYRQL-- 70

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
                 V YV+NITD+DD + ERA ++            + +     F  D   L+ L P
Sbjct: 71  LDNGYQVHYVQNITDVDDPLFERAERD------GVDWRELGTSQINLFRSDMELLSVLPP 124

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKM 175
                A   I ++  ++  +I  G AY  ++    ++     +  N+G  S     E   
Sbjct: 125 QDYVGAMEVIDEVTEMVSKLIDAGAAYVVDDPEFPDVYASIDATKNFGYESNYTAAEMAE 184

Query: 176 ----GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                   P++  K+NP D ++W+     EP W+SP+G GRPGWHIECSA++++ LG  F
Sbjct: 185 FFAERGGDPDRPGKRNPLDALVWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGAPF 244

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DL FPHHE   A +  A  +E+ A +++H G + L+G KMSKS GN + +++L
Sbjct: 245 DIQGGGSDLKFPHHEFSAAHAEAALGVERMAQVYVHTGMIGLDGVKMSKSLGNLVFVHKL 304

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
           +E             IRL +   HYR   D++ + L +A   L  W     + G ++   
Sbjct: 305 VEA------GVDPSAIRLGVFAGHYRAERDWSDEVLEQANERLGVWRDALQNPGSLEVAQ 358

Query: 349 ---PAVLSALYNDLNTVSAIQALHKLA---RESTKNHDLLPIFNASAHILGIEV 396
               A+  AL NDL+T + + A+   A   R +  +     I  A   +LG+  
Sbjct: 359 ELVAAIRGALANDLDTPAVLAAVDAWASADRGANNDEAGELIRTALDSLLGVRA 412


>gi|227487324|ref|ZP_03917640.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227542745|ref|ZP_03972794.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227092750|gb|EEI28062.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227181511|gb|EEI62483.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 404

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 127/406 (31%), Positives = 203/406 (50%), Gaps = 32/406 (7%)

Query: 4   KIKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +K+++T ++++ E          + MYVCG T YD  H+G+A   + FD+  R L    
Sbjct: 18  PLKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL--LA 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITD+DD + ERA ++            + +     F  D   L+ + P  
Sbjct: 76  NGHKVHYVQNITDVDDPLFERAERD------GVDWRELGTSQINLFRSDMEILSVIPPCD 129

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSR--RKIDEQKMGTR 178
              A   + ++I ++Q ++  G AYE +  +I     +   +G  S   R   E+    R
Sbjct: 130 YIGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAER 189

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GG
Sbjct: 190 GGDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGG 249

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E   
Sbjct: 250 GSDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA-- 307

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPA 350
                     IRLA+   HYRE  DF+   L EAE  L++W +      +      +   
Sbjct: 308 ----GHDPSAIRLAVFSGHYREDRDFSDAILAEAEERLARWREQLAGEVSEAGATDVVDK 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           + + L +DLNT  A+  L   A +  +      I  A   +LG+ +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGVRI 404


>gi|297195348|ref|ZP_06912746.1| cysteinyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152754|gb|EDY63189.2| cysteinyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 366

 Score =  360 bits (925), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 119/367 (32%), Positives = 184/367 (50%), Gaps = 28/367 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTAT---DGLVTLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA             + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------TRDGHDWTELAERETALFREDMTALRMLPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE   ++ F   S P++G  SR   +  ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDVYFSVESDPHFGEVSRLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVALDGAKMSKSKGNLVFVSKLRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
                     IRLA+L  HYR   ++T   L EA   + +W    +     S   +   +
Sbjct: 304 ----GVDPAAIRLALLSHHYRADWEWTDAVLREAVERVGRWRAAVSRPDGPSADALVEEI 359

Query: 352 LSALYND 358
            +AL +D
Sbjct: 360 RAALADD 366


>gi|213965593|ref|ZP_03393787.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium amycolatum SK46]
 gi|213951752|gb|EEB63140.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium amycolatum SK46]
          Length = 451

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 120/379 (31%), Positives = 193/379 (50%), Gaps = 36/379 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T ++K+++ +        MYVCG T YD  H+G+A   + FD++YR L      
Sbjct: 41  PLRLYDTADQKVSQVE--AGPEATMYVCGITPYDATHLGHAATYLTFDLIYRQL--LDNG 96

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+NITD+DD + ERA ++            + +     F  D   L+ + P    
Sbjct: 97  HSVHYVQNITDVDDPLFERAERD------GVDWRELGTSQIDLFRSDMENLSVIPPRDYI 150

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM---- 175
            A   + +++ +++ ++ +G AY+  N+   D     S+  N+G  S    ++       
Sbjct: 151 GAMESVDEVVDMVEKLLENGSAYQLTNDEYPDVYFRKSATENFGYESNYSAEQMAEFFAE 210

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
               P++  K+NP D ++W+ + P EP WE+P+G GRPGWHIECSA++++ LGK FDI G
Sbjct: 211 RGGDPDRPGKENPLDALVWRAARPGEPSWEAPFGAGRPGWHIECSAIATNRLGKSFDIQG 270

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHE   A +  A    + A  ++H G + L+G KMSKS GN + +++L+   
Sbjct: 271 GGSDLAFPHHEFSAAHAEAATGCARMARHYVHAGMIALDGVKMSKSLGNLVFVSKLVAA- 329

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPAVLS 353
                      IR+ +  +HYR   D++ + L  A+  L  W     ST     + AV  
Sbjct: 330 -----GVDPSAIRIGVFASHYRSDRDWSDEVLEAAKARLEAWRAACESTKTATDEKAVRE 384

Query: 354 A----------LYNDLNTV 362
           A          L NDL+T 
Sbjct: 385 AAALVADVRASLANDLDTP 403


>gi|320165548|gb|EFW42447.1| cysteine-tRNA ligase [Capsaspora owczarzaki ATCC 30864]
          Length = 582

 Score =  360 bits (924), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 152/519 (29%), Positives = 227/519 (43%), Gaps = 95/519 (18%)

Query: 6   KIYNTLERKITEFQA------------IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVL 53
           + YN L R +    +            + P+ +  Y+CGPTVYD AH+G+A   + FD++
Sbjct: 72  RAYNALTRSVAPLLSPDSNSNSHTRSDLTPNTLSWYICGPTVYDEAHLGHASCYVRFDII 131

Query: 54  YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
            R+L    G +    +  +TDIDDKII +A         N + S +  +  + FV+D   
Sbjct: 132 RRILTDRAGLRVF-QLMGMTDIDDKIIAKAAS------TNRSHSEVARQFEESFVQDMA- 183

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIP-NYGSF-SRRKI 170
                P    R T  IP +   I NII  G  Y A +  + FDT +    YG        
Sbjct: 184 --VRPPDAISRVTESIPAIQQFITNIIERGFGYTASDGSVYFDTQAFGSRYGKLRPSATA 241

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPW--GRGRPGWHIECSAMSSHYL 227
           D+       P   +K++P DF LWK +    EPG+ SP+  G GRPGWHIECSA++    
Sbjct: 242 DKSSAEATEPADSNKRSPRDFALWKATKSASEPGYPSPFSQGLGRPGWHIECSAIA--VF 299

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+  DIH GG+DL+FPHHENEIAQ      +++ A+ + H G L +   KMSKS  NF+T
Sbjct: 300 GQHLDIHSGGIDLLFPHHENEIAQCEAHHGVDQWAHHFWHTGHLLINKEKMSKSLNNFVT 359

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTS 341
           I + L       RS+ +   RL  L+T+YR+ + F  + +  A  L  K        QT+
Sbjct: 360 IKDFL-------RSYTSNQFRLFCLLTNYRQSVHFDDKTMQGAIALERKLAQFGAVLQTA 412

Query: 342 TSKGI-----------------------IDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
            + G+                        +  V +AL ND +T +A+QA   L   +   
Sbjct: 413 GATGVAWDSPATRAWGTSEVALRDRILTFEATVDAALCNDFDTSTAMQAAMTLVHHTYLY 472

Query: 379 HDLL-----------PIFNASAHILGIEVCKEHLNK------------NISIAIEKLVQE 415
            D +            +      +L +  C+  L+               S   +   Q 
Sbjct: 473 LDAVQGQQPNKLLVGSVARGIDGLLVLFGCQSLLSSPTTAASGAEAAALASAFADFRAQV 532

Query: 416 RLIL----LKMKK-FSSADYIRKQ-LESKGFILEDYKNP 448
           R +        K+ F   D  R +     GF L+D K+ 
Sbjct: 533 RKVAMANPKANKELFQLCDQARAETFPKLGFELQDNKSG 571


>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
 gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
           Japonica Group]
          Length = 420

 Score =  359 bits (923), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 138/427 (32%), Positives = 193/427 (45%), Gaps = 93/427 (21%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
             +L CL PT +PR T+HI  +I LI  I+ +G AY    ++ F   + P Y S S RK+
Sbjct: 1   MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 60

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           D    G+RV     K+NPADF LWK +   EP W+SPWGRGRPGWHIECSAMS+HYLG V
Sbjct: 61  DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 120

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG DLIFPHHENE+AQS  A    +    W+HNGF+N + +KMSKS+ NF TI +
Sbjct: 121 FDIHGGGKDLIFPHHENELAQSRAAYPESE-VKCWMHNGFVNKDDQKMSKSDKNFFTIRD 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--- 347
           +++        +    +R  ++ THYR  ++ + + L  A   +    QT      +   
Sbjct: 180 IIDL-------YHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQ 232

Query: 348 ---------------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---- 382
                                    L ++ +DL T   +     L +    N +      
Sbjct: 233 YRGENISVPVPVEEQDMVNKHHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQ 292

Query: 383 ----------------------------PIFNASAH----------ILGI-------EVC 397
                                           A             ILG+       E  
Sbjct: 293 QKLEQQKKKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEAL 352

Query: 398 KEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
           K+  +K +         +++ +++R    K K+F  +D IRKQL SKG  L D       
Sbjct: 353 KQLKDKALKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPT---- 408

Query: 452 QRMTRWK 458
              T W+
Sbjct: 409 --GTVWR 413


>gi|302527180|ref|ZP_07279522.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. AA4]
 gi|302436075|gb|EFL07891.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. AA4]
          Length = 412

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 129/411 (31%), Positives = 201/411 (48%), Gaps = 34/411 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + +++++T   ++        +  RMYVCG T YD  H+G+A   + FD++ R+ R   
Sbjct: 16  PRPLRLHDTATGQVRPTAP--GAAARMYVCGITPYDATHLGHAATYLAFDLVNRIWRDNG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V YV+N+TDID+ ++ERA ++       D   ++  + T  F +D   L  L P  
Sbjct: 74  HE--VHYVQNVTDIDEPLLERAERDS------DDWIVLGMRETALFREDMEALRVLPPRQ 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK--- 174
              A   IP+++ +I  ++  G AY A++    ++ FD ++   +G  S    +      
Sbjct: 126 FVGAVEAIPEIVEVIAKLLADGSAYRADDAEFPDVYFDHNATGRFGYESSYDAETMAKFF 185

Query: 175 -MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K++P D +LW+ +   EP WES  G GRPGWHIECSA++ + LG  FD+
Sbjct: 186 AERGGDPDRPGKRHPLDALLWRVAREGEPSWESELGAGRPGWHIECSAIAVNRLGLGFDV 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +         A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 246 QGGGSDLIFPHHEYSAAHAEAVAADHPFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRA 305

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--- 350
                        IRLA+   HYRE   +T Q L +A+  L++W +        D     
Sbjct: 306 D------GVDPAAIRLALFAGHYREDRAWTDQLLVDAQERLARWREAVALPAGPDAEDTV 359

Query: 351 --VLSALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILGI 394
             +   L +DLNT  A+ A+         R+ T       I  A   +LGI
Sbjct: 360 ARLRDHLSDDLNTPKALTAIDAWVTSALRRDGTDQAAPGLIKEAVDALLGI 410


>gi|32479379|ref|NP_862232.1| cysteinyl-tRNA synthetase [Corynebacterium striatum]
 gi|81324595|sp|Q9FB57|MSHC_CORST RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|9945792|gb|AAG03366.1| CysS [Corynebacterium striatum]
          Length = 404

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 127/406 (31%), Positives = 203/406 (50%), Gaps = 32/406 (7%)

Query: 4   KIKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +K+++T ++++ E          + MYVCG T YD  H+G+A   + FD+  R L    
Sbjct: 18  PLKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL--LA 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITD+DD + ERA ++            + +     F  D   L+ + P  
Sbjct: 76  NGHKVHYVQNITDVDDPLFERAERD------GVDWRELGTSQINLFRSDMEILSVIPPCD 129

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSR--RKIDEQKMGTR 178
              A   + ++I ++Q ++  G AYE +  +I     +   +G  S   R   E+    R
Sbjct: 130 YIGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAER 189

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GG
Sbjct: 190 GGDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGG 249

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E   
Sbjct: 250 GSDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA-- 307

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPA 350
                     IRLA+   HYRE  DF+   L EAE  L++W +      +      +   
Sbjct: 308 ----GHDPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDK 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           + + L +DLNT  A+  L   A +  +      I  A   +LG+ +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGVRI 404


>gi|300786807|ref|YP_003767098.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
 gi|299796321|gb|ADJ46696.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
          Length = 412

 Score =  359 bits (921), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 127/411 (30%), Positives = 205/411 (49%), Gaps = 34/411 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            + +++++T   +I        +  RMYVCG T YD  H+G+A   + FD++ R+ R   
Sbjct: 16  PRPLRLHDTATGQIRPTAP--GATARMYVCGITPYDATHLGHAATYLAFDLVNRIWRD-- 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+N+TDID+ ++ERA ++     +      +  + T  F +D T L  + P  
Sbjct: 72  NGHDVHYVQNVTDIDEPLLERAARDQGDWVV------LGMRETALFREDMTALRVIPPRQ 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK--- 174
              A   IP+++ +I  ++ +G AY A +    +I FD ++   +G  S    +      
Sbjct: 126 FVGAVESIPEIVEVIAKLLANGSAYRAGDPEFPDIYFDHTATGRFGYESNYDAETMAKFF 185

Query: 175 -MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P +  K++P D +LW+ +   EP WES  G GRPGWHIECSA++ + LG  FD+
Sbjct: 186 AERGGDPGRAGKRHPLDALLWRVAREGEPSWESELGPGRPGWHIECSAIAVNRLGLGFDL 245

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +    +  + A  ++H G + L+G KMSKS GN + ++ L  
Sbjct: 246 QGGGSDLIFPHHEYSAAHAEAVAKDGRFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRA 305

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIID 348
                        IRLA+   HYR+   +T + LT+AE  L++W +        +     
Sbjct: 306 D------QVDPGAIRLALFAGHYRDDRPWTDRLLTDAETRLARWREAVALATGPAAEDTV 359

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI 394
             +   L ++L+T  A+ A+   A E+ +     P     I +A   +LGI
Sbjct: 360 TRLRDHLSDNLDTPKALAAIDAWANEALRRDGTDPTAPGLIRDAVDALLGI 410


>gi|172039961|ref|YP_001799675.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|310947167|sp|B1VEQ2|MSHC1_CORU7 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 1;
           Short=L-Cys:GlcN-Ins ligase 1; AltName: Full=Mycothiol
           ligase 1; Short=MSH ligase 1
 gi|171851265|emb|CAQ04241.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
          Length = 404

 Score =  358 bits (920), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 127/406 (31%), Positives = 203/406 (50%), Gaps = 32/406 (7%)

Query: 4   KIKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +K+++T ++++ E          + MYVCG T YD  H+G+A   + FD+  R L    
Sbjct: 18  PLKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL--LA 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITD+DD + ERA ++            + +     F  D   L+ + P  
Sbjct: 76  NGHKVHYVQNITDVDDPLFERAERD------GVDWRELGTSQINLFRSDMEILSVIPPRD 129

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSR--RKIDEQKMGTR 178
              A   + ++I ++Q ++  G AYE +  +I     +   +G  S   R   E+    R
Sbjct: 130 YIGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAER 189

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GG
Sbjct: 190 GGDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGG 249

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E   
Sbjct: 250 GSDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA-- 307

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPA 350
                     IRLA+   HYRE  DF+   L EAE  L++W +      +      +   
Sbjct: 308 ----GHDPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDK 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           + + L +DLNT  A+  L   A +  +      I  A   +LG+ +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGVRI 404


>gi|297560505|ref|YP_003679479.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
 gi|310947207|sp|D7B412|MSHC_NOCDD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296844953|gb|ADH66973.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardiopsis dassonvillei subsp. dassonvillei
           DSM 43111]
          Length = 407

 Score =  358 bits (920), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 125/368 (33%), Positives = 181/368 (49%), Gaps = 26/368 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++++T   +I            MY CG T YD AH+G+A   + FD++ R+ R     
Sbjct: 18  PLRVHDTATGRIRTTTP--GPRAGMYACGITPYDAAHLGHAFTYLTFDLVNRVWRDAG-- 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N TDIDD ++ERA               +  +    F +D   L  + PT   
Sbjct: 74  HDVNYVQNTTDIDDPLLERAEA------TGVDWRDLAHREIDVFREDMAALRIIPPTSYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM--GTR--V 179
                +  +  L   I   G AYE + ++ F  +  P +G  S     +     G R   
Sbjct: 128 GVVESVDLISDLAARIRDTGAAYELDGDLYFSVAEAPEFGEISNLDRGQMLELFGERGGD 187

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P++  KK+P D++LW+   P EP W+SP GRGRPGWHIECSA++   LG  FD++GGG D
Sbjct: 188 PQRTGKKDPLDWLLWRAERPGEPAWDSPLGRGRPGWHIECSAIALDRLGPAFDLNGGGSD 247

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           LIFPHHE   A++ CA      A+  +H G + L+G KMSKS GN + +++L +      
Sbjct: 248 LIFPHHEMGAAETRCATGG-PNAHNHLHVGMVGLDGEKMSKSLGNLVFVSKLRQ------ 300

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA 354
           +     VIRLAML  HYR P ++T   L  A     +W          D      AV +A
Sbjct: 301 QGVDPAVIRLAMLAHHYRAPWEWTDAELPAATARAERWRSALALGAAPDAAPVLAAVRAA 360

Query: 355 LYNDLNTV 362
           L  DL++ 
Sbjct: 361 LSEDLDSP 368


>gi|227549273|ref|ZP_03979322.1| cysteinyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
 gi|227078592|gb|EEI16555.1| cysteinyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
           44291]
          Length = 404

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 127/406 (31%), Positives = 201/406 (49%), Gaps = 32/406 (7%)

Query: 4   KIKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++K+Y+T ++ +            + MYVCG T YD  H+G+A   + FD++ R L    
Sbjct: 18  ELKLYDTADQVVKPVDTTPNAHGEVGMYVCGITPYDSTHLGHAATYLTFDLVQRQL--IA 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITD+DD + ERA ++            +       F  D   L  + P  
Sbjct: 76  NGHRVHYVQNITDVDDPLFERAARD------GVDWRELGQSQIDLFRSDMGILGVIPPRD 129

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQK----MG 176
              A   + ++I ++  ++    AY  +  +I     +   +G  S    +E +      
Sbjct: 130 YIGAIESVNEVIEMVGKLLDASAAYRLDHGDIYASIDATAQFGYESNYSREEMETYFAER 189

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE+  K++P D ++W+     EP W+SP+G GRPGWHIECSA++++ LG  F I GG
Sbjct: 190 GGDPERPGKRDPLDALVWRGHRDGEPAWDSPFGPGRPGWHIECSAIATNRLGATFAIQGG 249

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   A +  A R  + A  ++H G + L+G KMSKS GN + +++L E   
Sbjct: 250 GSDLAFPHHEFSAAHAEAAYRQRRMATHYVHAGMIALDGVKMSKSLGNLVFVHKLTE--- 306

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-QTSTSKGIIDPAVL--- 352
              +   A  IRLA+   HYR   DF+   L  AE  L++W    +   G +D AV+   
Sbjct: 307 ---KGHEASAIRLAVFAEHYRTDRDFSDAILVAAEQRLARWRDNLARPVGQVDAAVVVDK 363

Query: 353 --SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
             +AL +DL+T +A++ + + A +         I  A   +LG+ V
Sbjct: 364 LRAALADDLDTAAALRIIDEAAGDHEG-----AIARAIDGLLGVRV 404


>gi|134098795|ref|YP_001104456.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|310947213|sp|A4FBV6|MSHC_SACEN RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|133911418|emb|CAM01531.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 412

 Score =  358 bits (919), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 121/412 (29%), Positives = 196/412 (47%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++++T   ++           RMYVCG T YD  H+G+A   + FD+++R+      
Sbjct: 17  RPLRLFDTAAGEVRPVT--AGRTARMYVCGITPYDATHLGHAATYLAFDLVHRIW--LDN 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TDIDD ++ERA ++      N+   ++  + T  F +D   L  + PT  
Sbjct: 73  GHDVHYVQNVTDIDDPLLERANRD------NEDWVVLAMRETALFREDMEALRVVPPTDF 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRK----IDEQK 174
             A   IP++   +  ++  G AY  +++   D     S+   +G  S       +D   
Sbjct: 127 IGAVESIPEIEEAVGKLLASGAAYRVDDDEYPDVYFRHSATGRFGYESNYDEATMLDLSA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K++P D +LW+ +   EP WES  G GRPGWH+ECS ++ + LG  FD+ 
Sbjct: 187 ERGGDPDRKGKEHPLDALLWRMARDGEPSWESELGPGRPGWHLECSVIALNRLGMGFDVQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   A +         A  + H G + L+G KMSKS GN + ++ L   
Sbjct: 247 GGGSDLAFPHHEFSAAHAEALAGDHPFARHYCHAGMIGLDGEKMSKSKGNLVFVSRLR-- 304

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDP 349
               G       IRLA+L  HYR    +T   LT+    L++W +        S   +  
Sbjct: 305 ----GDRVDPMAIRLALLDGHYRSDRSWTADALTKGSARLARWREAVALEAGPSAEPVVE 360

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIEV 396
            +   L +DL+T  A+ A+     E+             I +A   +LG+++
Sbjct: 361 RLRDRLSDDLDTERALLAVDAWVDEALCRRGGDAEAPAAIRDAVDGLLGVQL 412


>gi|289641824|ref|ZP_06473981.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia symbiont of Datisca glomerata]
 gi|289508349|gb|EFD29291.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia symbiont of Datisca glomerata]
          Length = 413

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 124/407 (30%), Positives = 190/407 (46%), Gaps = 30/407 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++ +T  R +          +RMYVCG T YD  H+G+A   + +D+ YR+L      
Sbjct: 18  PLRVSDTATRAVRPLA--AGQTVRMYVCGITPYDATHLGHAFTYLTYDLAYRVL--LDAG 73

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+DD + ERAR++            I    T+ F  D T L  L P    
Sbjct: 74  HDVVYVQNVTDVDDPLFERARRDSLDW------REIARSQTELFRADMTALRILPPAVYA 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRV 179
            A   IP +I LI+ +   G AY    +I F   + P +G  S     E           
Sbjct: 128 GAVESIPLVIELIEQLRDRGAAYPVEQDIYFPIGAAPRFGEVSHLSHAEMVTRAAGNGGD 187

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P +  K +P D +LW+     EP W SP+G GRPGWHIEC+A++  +LG   DI GGG D
Sbjct: 188 PRRAGKDDPLDPLLWRAERAGEPSWPSPFGPGRPGWHIECAAIALAHLGDSIDIQGGGTD 247

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L+FPHHE  +A +  A  +   A  ++H   ++L G KMSKS GN   ++ LL       
Sbjct: 248 LVFPHHECGVAHAEVASGVWPFARTYVHTAMVSLGGHKMSKSRGNLEFVSRLLRG----- 302

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSA 354
                  IRLA+L   +    ++T   +  A   L++W   +      D       V   
Sbjct: 303 -GVQPAAIRLALLDHRHTVGWEWTPGAIDTARDRLARWQAATAGASAPDARPLLDDVRRH 361

Query: 355 LYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASAH-ILGIEV 396
           L +DL+   A+ A+ + A  +     ++ +   +  A    +LG+++
Sbjct: 362 LADDLDAPGALAAVDRWAATALTVGGQDPEAPELARAIIDSLLGVDL 408


>gi|26334827|dbj|BAC31114.1| unnamed protein product [Mus musculus]
 gi|148690121|gb|EDL22068.1| mCG11180, isoform CRA_d [Mus musculus]
          Length = 335

 Score =  358 bits (918), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 120/315 (38%), Positives = 172/315 (54%), Gaps = 18/315 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  
Sbjct: 147 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAE 202

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+D
Sbjct: 203 PGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGID 262

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI +   +   
Sbjct: 263 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKD---SAGL 319

Query: 298 GGRSWPAPVIRLAML 312
                  P +  A+L
Sbjct: 320 QAVGAEPPGLLFALL 334


>gi|302206181|gb|ADL10523.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
 gi|308276423|gb|ADO26322.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
          Length = 416

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 128/416 (30%), Positives = 207/416 (49%), Gaps = 36/416 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +Y+T +R I      +   + +YVCG T YD  H+G+A   + FD++ R L    
Sbjct: 16  KVALSLYDTADRVIKPVNCSN-GEVGVYVCGITPYDSTHLGHAATYLAFDLINRQL--ID 72

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V +V+NITD+DD + ERA ++        +   + +     F  D   L+ + P  
Sbjct: 73  AGHTVHFVQNITDVDDPLFERAERD------GVSWRELGTDQINLFRSDMEALSVIPPRD 126

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN----NEIIFDTSSIPNYGSFSR--RKIDEQKM 175
              A   I ++I ++Q ++ +G AY  +     +I   TS+  ++G  S   R + E+  
Sbjct: 127 YVGAMEAIDEVIEMVQALLDNGSAYIVDVDQYRDIYASTSATSHFGYESNYSRDLMEEFF 186

Query: 176 GTR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
             R   PE+  KK+P D ++W+ +   EP W++P+G GRPGWHIECSA++++ LG  F I
Sbjct: 187 AERGGDPERPGKKDPLDALIWRSARKGEPSWDAPFGAGRPGWHIECSAIATNRLGNNFAI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +  A  + + AN ++H G + L+G KMSKS GN + +++L  
Sbjct: 247 QGGGSDLIFPHHEFSAAHAEAAHHVHRMANHYVHAGMIALDGVKMSKSLGNLVFVSQL-- 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--- 350
                        IRL +   HYR P +++ + L++AE     W   + +   +  A   
Sbjct: 305 ----TADGHHPSAIRLGLYSGHYRSPREWSEKILSDAEKRRELWINAADTATDLQAAQNL 360

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-------ASAHILGIEV 396
              +   L  DL+T  A+ A+   A+   KN               A   +LGI++
Sbjct: 361 VASIRFYLSQDLDTPKALAAVDAWAKAIEKNESSRERAAAGDLVACALDALLGIKI 416


>gi|68535433|ref|YP_250138.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|260578233|ref|ZP_05846150.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
 gi|311740644|ref|ZP_07714471.1| cysteinyl-tRNA synthetase [Corynebacterium pseudogenitalium ATCC
           33035]
 gi|123761918|sp|Q4JXD7|MSHC1_CORJK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 1;
           Short=L-Cys:GlcN-Ins ligase 1; AltName: Full=Mycothiol
           ligase 1; Short=MSH ligase 1
 gi|68263032|emb|CAI36520.1| cysS2 [Corynebacterium jeikeium K411]
 gi|258603633|gb|EEW16893.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
 gi|311304164|gb|EFQ80240.1| cysteinyl-tRNA synthetase [Corynebacterium pseudogenitalium ATCC
           33035]
          Length = 404

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 126/406 (31%), Positives = 202/406 (49%), Gaps = 32/406 (7%)

Query: 4   KIKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +K+++T ++++ E          + MYVCG T YD  H+G+A   + FD+  R L    
Sbjct: 18  PLKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQL--LA 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V Y +NITD+DD + ERA ++            + +     F  D   L+ + P  
Sbjct: 76  NGHKVHYAQNITDVDDPLFERAERD------GVDWRELGTSQINLFRSDMEILSVIPPRD 129

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSR--RKIDEQKMGTR 178
              A   + ++I ++Q ++  G AYE +  +I     +   +G  S   R   E+    R
Sbjct: 130 YIGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAER 189

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P++  K++P D ++W+     EP W+SP+G GRPGWH+ECSA++++ LG  F I GG
Sbjct: 190 GGDPDREGKRDPLDALIWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGG 249

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   A +  A ++E+ A  ++H G + L+G KMSKS GN + +++L E   
Sbjct: 250 GSDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA-- 307

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPA 350
                     IRLA+   HYRE  DF+   L EAE  L++W +      +      +   
Sbjct: 308 ----GHDPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDK 363

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
           + + L +DLNT  A+  L   A +  +      I  A   +LG+ +
Sbjct: 364 LRAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGVRI 404


>gi|282864361|ref|ZP_06273417.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. ACTE]
 gi|282560848|gb|EFB66394.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. ACTE]
          Length = 409

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 116/381 (30%), Positives = 191/381 (50%), Gaps = 28/381 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +   +  + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------VRDGEDWAELAERETALFREDMTALRMLPPKH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ ++  G AYE + ++ F   S P++G  S    +  ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLLDAGAAYELDGDVYFSVGSDPHFGGVSHLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  +   EP W+          WHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARDGEPSWDGGRLGRGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 246 GSDLVFPHHEMGASHAQALTGEYPFAQAYVHAGMVGLDGEKMSKSKGNLVFVSALRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----AV 351
                     IRL++L  HYR   ++T Q L +A   L++W    +    +        V
Sbjct: 304 ----GVDPAAIRLSLLAHHYRSDWEWTDQVLADAVERLARWRAAVSRPDGLPADALVDEV 359

Query: 352 LSALYNDLNTVSAIQALHKLA 372
             AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380


>gi|326382269|ref|ZP_08203961.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326198999|gb|EGD56181.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 416

 Score =  357 bits (916), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 121/374 (32%), Positives = 187/374 (50%), Gaps = 31/374 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++Y+T + ++   + + P  +  MYVCG T YD  H+G+A   + FD++ R+LR   G
Sbjct: 18  PLRLYDTSDAQV---KPVSPGEVATMYVCGITPYDATHLGHAATYVTFDLINRVLRD--G 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+NITD+DD + ERA ++            + ++    F  D T L  LAP   
Sbjct: 73  GHDVHYVQNITDVDDPLFERAERD------GVDWRDLGAREIDLFRADMTALRVLAPRDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
             A   I ++I  +  ++ +G AY  ++    ++ F   + P +G  S    +       
Sbjct: 127 IGAVESIDEVIDAVGKLLANGSAYVVDDPEFPDVYFSVDATPQFGYESGYDGETMAKFFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K+NP D ++W+ +   EP WESP G GRPGWHIECSA++ + LG  FDI 
Sbjct: 187 ERGGDPDRAGKRNPLDALVWRAARDGEPSWESPMGPGRPGWHIECSAIALNRLGMAFDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHE   A         + A  ++H G + L+G KMSKS GN + +++L   
Sbjct: 247 GGGSDLIFPHHEFSAAHGEALTGERRFARHYVHTGMIGLDGEKMSKSLGNLVLVSKLRAA 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                    A  +RL ++  HYR    +T   LT+ E  L+ W + +      D     A
Sbjct: 307 ------GVDAGAVRLGLMSQHYRADRMWTDDILTDGERRLATWRRAAKHATGPDATATVA 360

Query: 355 -----LYNDLNTVS 363
                L +DL+T  
Sbjct: 361 RLRQHLSDDLDTAK 374


>gi|300858471|ref|YP_003783454.1| mshC ligase [Corynebacterium pseudotuberculosis FRC41]
 gi|300685925|gb|ADK28847.1| MshC ligase [Corynebacterium pseudotuberculosis FRC41]
 gi|302330740|gb|ADL20934.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
          Length = 416

 Score =  356 bits (915), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 127/416 (30%), Positives = 207/416 (49%), Gaps = 36/416 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  + +Y+T +R I      +   + +YVCG T YD  H+G+A   + FD++ R L    
Sbjct: 16  KVALSLYDTADRVIKPVNCSN-GEVGVYVCGITPYDSTHLGHAATYLAFDLINRQL--ID 72

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V +V+NITD+DD + ERA ++        +   + +     F  D   L+ + P  
Sbjct: 73  AGHTVHFVQNITDVDDPLFERAERD------GVSWRELGTDQINLFRSDMEALSVIPPRD 126

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN----NEIIFDTSSIPNYGSFSR--RKIDEQKM 175
              A   I ++I ++Q ++ +G AY  +     +I   TS+  ++G  S   R + E+  
Sbjct: 127 YVGAMEAIDEVIEMVQALLDNGSAYIVDVDQYRDIYASTSATSHFGYESNYSRDLMEEFF 186

Query: 176 GTR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
             R   PE+  KK+P D ++W+ +   EP W++P+G GRPGWHIECSA++++ LG  F I
Sbjct: 187 AERGGDPERPGKKDPLDALIWRSARKGEPSWDAPFGAGRPGWHIECSAIATNRLGNNFAI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +  A  + + AN ++H G + L+G KMSKS GN + +++L  
Sbjct: 247 QGGGSDLIFPHHEFSAAHAEAAHHVHRMANHYVHAGMIALDGVKMSKSLGNLVFVSQL-- 304

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--- 350
                        IRL +   HYR P +++ + L++AE     W   + +   +  A   
Sbjct: 305 ----TADGHHPSAIRLGLYSGHYRSPREWSEKILSDAEKRRELWINAADTATDLQAAQNL 360

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-------ASAHILGIEV 396
              +   L  DL+T  A+ A+   A+   KN               A   +LG+++
Sbjct: 361 VASIRFYLSQDLDTPKALAAVDAWAKAIEKNESSRERAAAGDLVACALDALLGVKI 416


>gi|26344287|dbj|BAC35800.1| unnamed protein product [Mus musculus]
 gi|148690123|gb|EDL22070.1| mCG11180, isoform CRA_f [Mus musculus]
          Length = 392

 Score =  356 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 117/293 (39%), Positives = 166/293 (56%), Gaps = 15/293 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  
Sbjct: 147 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAE 202

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECS M+S   G   DIH GG+D
Sbjct: 203 PGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGID 262

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINE 290
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI +
Sbjct: 263 LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKD 315


>gi|68063221|ref|XP_673620.1| hypothetical protein [Plasmodium berghei strain ANKA]
 gi|56491605|emb|CAI02493.1| hypothetical protein PB300790.00.0 [Plasmodium berghei]
          Length = 386

 Score =  356 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 122/333 (36%), Positives = 183/333 (54%), Gaps = 25/333 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + + N+L     EF   + + I+ Y CGPTVYD AH+G+AR  + FD++ R+L  Y+ 
Sbjct: 21  TNLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILTNYF- 79

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V  V NITDIDDKII+R+ +E  +       + +  K   +F +D   L  L P+  
Sbjct: 80  KYDVFMVINITDIDDKIIKRSEEEKVN------FTELARKWEYEFWEDMKSLNVLLPSSI 133

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQ-------- 173
            R + ++ ++I  I+ II + +AY +    + FD  +     +    +++          
Sbjct: 134 TRVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKI 193

Query: 174 --KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
               G       +KKN  DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV 
Sbjct: 194 LEGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVL 253

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS       +  N ++H+G L++EG KMSKS  NFITIN++
Sbjct: 254 DIHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITINDM 313

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
                   + +    IR+  L   +   + ++ 
Sbjct: 314 F-------KQYTCARIRILFLFNSWDSFMSYSP 339


>gi|291005851|ref|ZP_06563824.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 404

 Score =  356 bits (915), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 121/412 (29%), Positives = 196/412 (47%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++++T   ++           RMYVCG T YD  H+G+A   + FD+++R+      
Sbjct: 9   RPLRLFDTAAGEVRPVT--AGRTARMYVCGITPYDATHLGHAATYLAFDLVHRIW--LDN 64

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TDIDD ++ERA ++      N+   ++  + T  F +D   L  + PT  
Sbjct: 65  GHDVHYVQNVTDIDDPLLERANRD------NEDWVVLAMRETALFREDMEALRVVPPTDF 118

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRK----IDEQK 174
             A   IP++   +  ++  G AY  +++   D     S+   +G  S       +D   
Sbjct: 119 IGAVESIPEIEEAVGKLLASGAAYRVDDDEYPDVYFRHSATGRFGYESNYDEATMLDLSA 178

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K++P D +LW+ +   EP WES  G GRPGWH+ECS ++ + LG  FD+ 
Sbjct: 179 ERGGDPDRKGKEHPLDALLWRMARDGEPSWESELGPGRPGWHLECSVIALNRLGMGFDVQ 238

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   A +         A  + H G + L+G KMSKS GN + ++ L   
Sbjct: 239 GGGSDLAFPHHEFSAAHAEALAGDHPFARHYCHAGMIGLDGEKMSKSKGNLVFVSRLR-- 296

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDP 349
               G       IRLA+L  HYR    +T   LT+    L++W +        S   +  
Sbjct: 297 ----GDRVDPMAIRLALLDGHYRSDRSWTADALTKGSARLARWREAVALEAGPSAEPVVE 352

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIEV 396
            +   L +DL+T  A+ A+     E+             I +A   +LG+++
Sbjct: 353 RLRDRLSDDLDTERALLAVDAWVDEALCRRGGDAEAPAAIRDAVDGLLGVQL 404


>gi|29833189|ref|NP_827823.1| cysteinyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
 gi|61216619|sp|Q828M2|MSHC_STRAW RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|29610311|dbj|BAC74358.1| putative ATP-dependent l-cysteine: 1D-myo-inositoyl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase
           [Streptomyces avermitilis MA-4680]
          Length = 409

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 116/366 (31%), Positives = 179/366 (48%), Gaps = 28/366 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T    +     + P  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGV---IPLHPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++            +  K T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAERDGVDWVG------LAEKETALFREDMTALRMLPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE + ++ F   + P++G  S       ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVEADPHFGKVSNLDAAAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGASLGRGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L G KMSKS GN + +++L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALNGEKMSKSKGNLVFVSKLRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAV 351
                     IRLA+L  HYR   ++T   L EA   L  W    +         +   +
Sbjct: 304 ----GVDPAAIRLALLAHHYRSDWEWTDAVLEEALARLGTWRAAVSRPDGPPAEALVEEI 359

Query: 352 LSALYN 357
             AL N
Sbjct: 360 RDALAN 365


>gi|302550316|ref|ZP_07302658.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces viridochromogenes DSM 40736]
 gi|302467934|gb|EFL31027.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces viridochromogenes DSM 40736]
          Length = 409

 Score =  356 bits (913), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 117/366 (31%), Positives = 181/366 (49%), Gaps = 28/366 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGG---LVTLDPGPVARIYVCGITPYDATHLGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA+++            +  + T  F +D T L  L P  
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAQRDGLDWA------ALAEQETALFREDMTALRMLPPRQ 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE   ++ F   S P++G  S       ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLRDLGAAYELEGDVYFSVESDPHFGKVSNLDAAAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FDI GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDIQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L+G KMSKS GN + +++L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSKLRYD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAV 351
                     IRLA+L  HYR   ++T Q L +A   L +W    +         +   +
Sbjct: 304 ----GVDPAAIRLALLAHHYRADWEWTDQVLQDAVDRLGRWRAAVSRPDGPPAEALVEEI 359

Query: 352 LSALYN 357
             AL N
Sbjct: 360 REALAN 365


>gi|66818080|ref|XP_642733.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74997262|sp|Q54ZY3|SYCM_DICDI RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
           AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
           Precursor
 gi|60470862|gb|EAL68834.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 583

 Score =  356 bits (913), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 138/483 (28%), Positives = 213/483 (44%), Gaps = 77/483 (15%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
            +   I  Y CGPTVY  +HIG+AR  +  D++ R+L  Y+    + +V  +TDIDDKII
Sbjct: 72  KNQRPISWYTCGPTVYSSSHIGHARNYMTVDIIQRILINYF-RFNIIHVMGLTDIDDKII 130

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
            +++QE        + S ++ K  Q+F +D   L    P    R + HI ++I  I+ I 
Sbjct: 131 NKSKQEL------ISASELSKKFEQEFFEDLKSLNIKPPMFTTRVSEHIDEIIKYIEKIK 184

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
            +   YE+   +IFD +        S R  ++Q        +  KK+  DF+LWK     
Sbjct: 185 ENQLTYESTKSVIFDVNKFGIDRYCSLRAANQQIKSDDTLLEKDKKSSQDFVLWKAYNEN 244

Query: 201 --------EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
                      W+SP+G+GRPGWHIECSAM         D+H GG+DL FPHH+NEIAQ 
Sbjct: 245 IDIDGTGNPVCWDSPFGKGRPGWHIECSAMIDSIFKDHLDVHSGGVDLEFPHHQNEIAQC 304

Query: 253 CCADRIE--------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
                          + AN + H G L L   KMSKS GN ITI + L         + A
Sbjct: 305 EGHSHSHGSGDAESTQWANYFFHIGHLILNNEKMSKSLGNVITIRDFLSR-------YSA 357

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEA-----------EILLSKWPQTSTSKGIIDPAV-- 351
             +R   L+  Y +P+ F+ + L              +I+ SK     TS   +      
Sbjct: 358 NSLRWICLIHKYNDPLSFSDETLQLCISKEIKFLNWFKIVRSKLKLEQTSVNKVKKTFNH 417

Query: 352 -LSALY--------------NDLNTVSAIQALHKLARESTKNHDLLPI---------FNA 387
            +  L               +D NT S I+ L  L +++ ++ + +             +
Sbjct: 418 SIELLNQLSETKYLIEKDLKDDFNTPSVIKRLELLMKQTNESMNSIDTDLLFNVQDYVES 477

Query: 388 SAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLK-MKKFSSADYIRKQLESKGFI 441
             +I G+EV  E       +++    +EKL+  R  +    K   S D I+ ++    + 
Sbjct: 478 ILNIFGLEVNSEISDHNKTDESNQFLLEKLLDFRSDVKNLAKNEKSLDQIKSKI----YQ 533

Query: 442 LED 444
           + D
Sbjct: 534 ITD 536


>gi|172040712|ref|YP_001800426.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
 gi|310947168|sp|B1VDU4|MSHC2_CORU7 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2;
           Short=L-Cys:GlcN-Ins ligase 2; AltName: Full=Mycothiol
           ligase 2; Short=MSH ligase 2
 gi|171852016|emb|CAQ04992.1| MshC ligase [Corynebacterium urealyticum DSM 7109]
          Length = 439

 Score =  355 bits (912), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 121/390 (31%), Positives = 197/390 (50%), Gaps = 28/390 (7%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            ++++Y+T + R        D + + +YVCG T YD  H+G+A     FD++ R LR   
Sbjct: 31  PELRLYDTADDRVKAVALPDDGAPVGIYVCGITPYDSTHLGHAATYNTFDLVNRYLRAAG 90

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYV+N+TD+DD + ERA ++            +  + T  F  D T+L  L P  
Sbjct: 91  HG--VTYVQNVTDVDDPLFERADRD------GVDWRELGKEQTDLFRSDMTQLRILPPEF 142

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKM--- 175
              A   I +++ ++  ++  G AY  +    +I  D +    +G  SR      +    
Sbjct: 143 FVGAMETIDEVVEMVSTLLDKGAAYVVDGEYPDIYADHTYTEQFGYESRYDEATMRELFA 202

Query: 176 -GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                PE+  K++P D +LW+     EP W++P+G GRPGWH+EC+A++++ LG+ F I 
Sbjct: 203 ERGGDPEREGKRHPLDALLWRAHRTGEPEWDAPFGSGRPGWHVECAAIATNRLGEQFAIQ 262

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL +PHHE   A +  A   ++ A  ++H G + LEG KMSKS GN   ++ L   
Sbjct: 263 GGGVDLRYPHHEYSAAHAEAACGNQRMAGHYVHTGMIGLEGTKMSKSLGNLEFVSAL--- 319

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------GIID 348
                + +    IR+ +   HYRE  D++ + L EAE  L+KW   +  +        + 
Sbjct: 320 ---TAQGFDPAAIRVGLYAGHYREDRDWSAEVLNEAEDRLAKWRAAAAEENNPQRVAEVL 376

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN 378
             V   L NDL+T S ++ L + A    ++
Sbjct: 377 ATVTGHLANDLDTPSVLRTLDEWAAAVNES 406


>gi|319949266|ref|ZP_08023346.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
 gi|319437056|gb|EFV92096.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
          Length = 399

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 124/410 (30%), Positives = 188/410 (45%), Gaps = 36/410 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+++T   ++ E          MYVCG T YD  H+G+A   + FD++YR L     E 
Sbjct: 1   MKLFDTAGGEVREVSP--GPVAGMYVCGITPYDTTHLGHAATYLTFDLVYRQLLDAGHE- 57

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N TD+DD + ERA ++            +  + T  F +D   L  L P     
Sbjct: 58  -VHYVQNTTDVDDPLFERAERD------GVDWRELGDRETDLFREDMEALRVLPPRDYVA 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDTSSIPNYGSFSRRKIDEQKMG-- 176
           AT  I +++ ++  ++  GHAY  +      +++ +   +  ++G  S    DE  +   
Sbjct: 111 ATETIDEVVEMVGELLDRGHAYRIDPDVDGYSDVYYRHRATADFGYESGYDDDEMAVAFA 170

Query: 177 --TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K++P D +LW+   P EP W SPWG GRPGWHIECSA++ + LG  FDI 
Sbjct: 171 ERGGDPDRPGKEHPLDALLWRVERPGEPSWPSPWGAGRPGWHIECSAIARNRLGMEFDIQ 230

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   A +  A      A  ++H   + L+G KMSKS GN + +  L + 
Sbjct: 231 GGGSDLAFPHHEFSAAHAEAAAGRRPFARFYVHAAMIGLDGVKMSKSLGNLVRVQALRD- 289

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDP 349
                R     +IRL +   HYR    ++   L  A      W              +  
Sbjct: 290 -----RGVDPALIRLGLFAGHYRVDRSWSDDLLERARTRYDLWCRVIARGVGADAAPVIA 344

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----LPIFNASAHILGI 394
            +   L +DL+T  A+  +   A  +    D        I  A   +LGI
Sbjct: 345 ELRERLADDLDTPGALAVVDAWASATLDGDDSDPSAGAGIATALDALLGI 394


>gi|294628495|ref|ZP_06707055.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. e14]
 gi|292831828|gb|EFF90177.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces sp. e14]
          Length = 409

 Score =  354 bits (909), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 115/365 (31%), Positives = 180/365 (49%), Gaps = 26/365 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T    +           R+YVCG T YD  H+G+A     FD++ R+      
Sbjct: 17  RDLRIHDTATGGLVTLTP--GPVARLYVCGITPYDATHMGHAATYNAFDLVQRVW--LDT 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           ++ V YV+N+TD+DD ++ERA+++            +  + T  F +D T L  L P H 
Sbjct: 73  KRQVHYVQNVTDVDDPLLERAQRDDLDWV------ALAERETALFREDMTALRMLPPRHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP ++ L++ +   G AYE + ++ F   S P++GS SR      ++ +     
Sbjct: 127 IGAVEAIPGIVPLVERLRDLGAAYELDGDVYFSVESDPHFGSVSRLDAAAMRLLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            P++  KKNP D +LW  +   EP W+    G GRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHHE   + +         A  ++H G + L+G KMSKS GN + ++ L      
Sbjct: 247 SDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSRLRRD--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVL 352
                    IRLA+L  HYR   ++T Q L +A   L +W    +     +   +   + 
Sbjct: 304 ---GVDPAAIRLALLAHHYRSDWEWTDQVLQDAVARLGRWRAAVSRPDGPAADKLVEEIR 360

Query: 353 SALYN 357
            AL  
Sbjct: 361 DALAE 365


>gi|68536033|ref|YP_250738.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
 gi|123761878|sp|Q4JVN7|MSHC2_CORJK RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2;
           Short=L-Cys:GlcN-Ins ligase 2; AltName: Full=Mycothiol
           ligase 2; Short=MSH ligase 2
 gi|68263632|emb|CAI37120.1| cysS1 [Corynebacterium jeikeium K411]
          Length = 415

 Score =  353 bits (907), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 132/430 (30%), Positives = 203/430 (47%), Gaps = 46/430 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T +  +   + I    + MYVCG T YD  H+G+A   + FD+++R LR    
Sbjct: 17  PQLRLYDTADDVVKPVE-IPAGEVGMYVCGITPYDSTHLGHAATYLTFDLIHRYLRAAGH 75

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+NITD+DD + ERA ++            + +     F  D   LA + P   
Sbjct: 76  G--VHYVQNITDVDDPLFERAERD------GVDWQDLGTSQIDLFRSDMEDLAVIPPRDY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS----IPNYGSFSRRKIDEQKM--- 175
             A   I ++I ++  ++  G AY+   +   D  +    +P +G  SR    +      
Sbjct: 128 IGAMESIDEVIEMVAKLLEVGAAYQLEGDEYPDIYADYTFLPQFGYESRYDEQQMAEFFA 187

Query: 176 -GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                PE+  K++P D +LW+     EP W+SP+G GRPGWHIECSA++ + LG  F I 
Sbjct: 188 ERGGDPERPGKRHPMDALLWRAHREGEPKWDSPFGPGRPGWHIECSAIAVNRLGAPFAIQ 247

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE     +  A  +++ A+ ++H G + L+G KMSKS GN + ++ L   
Sbjct: 248 GGGSDLRFPHHEFSATHAEAAHGVDRMAHHYVHTGMIGLDGTKMSKSLGNLVFVSRLTAA 307

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPA--- 350
                       IRL +   HYR+  D+T   L  AE  L+ W    +T    +D A   
Sbjct: 308 ------GHEPAAIRLGVYAGHYRQDRDWTNDVLAHAEHRLASWRAALATGSTTLDEAREL 361

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              V   L NDL+T +A++AL   A ++                       E     I  
Sbjct: 362 VATVRGHLANDLDTAAALEALDDWAADTKTGA----------------AGDEAAASEIKT 405

Query: 408 AIEKLVQERL 417
           AI+ L+  RL
Sbjct: 406 AIDALLGVRL 415


>gi|239978594|ref|ZP_04701118.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 385

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 118/365 (32%), Positives = 187/365 (51%), Gaps = 25/365 (6%)

Query: 19  QAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           + + P  + R+YVCG T YD  H+G+A     FD++ R+      ++ V YV+N+TD+DD
Sbjct: 6   KTLTPGPVARLYVCGITPYDATHMGHAATYNAFDLVQRVW--LDTKRQVHYVQNVTDVDD 63

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
            ++ERA ++          + +  + T  F +D T L  + P     A   IP++I L++
Sbjct: 64  PLLERAVRDGVEW------TGLAERETALFREDMTALRMIPPRDYIGAVEAIPRIIPLVE 117

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVPEKYHKKNPADFIL 193
            +   G AYE   ++ F   + P++G  S       ++ +      PE+  KKNP D +L
Sbjct: 118 RLRDAGAAYELEGDLYFSVEADPHFGEVSHLDATAMRLLSAERGGDPERPGKKNPLDPML 177

Query: 194 WKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           W  +   EP W+    G+GRPGWHIEC A++  +LG  FD+ GGG DL+FPHHE   + +
Sbjct: 178 WMAAREGEPSWDGGSLGQGRPGWHIECVAIALDHLGMGFDLQGGGSDLVFPHHEMGASHA 237

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
             A      A+ ++H G + L+G KMSKS GN + ++ L               IRLA+ 
Sbjct: 238 HAATGEYPFAHSYVHAGMVALDGEKMSKSKGNLVFVSALRRA------GVEPAAIRLALH 291

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAIQA 367
             HYR   ++T   L EA   L++W    +     D       V +AL +DL+  +A++A
Sbjct: 292 AHHYRADWEWTDATLQEATRRLARWRAAVSRPDGPDASAVVEQVRAALADDLDAPAALRA 351

Query: 368 LHKLA 372
           +   A
Sbjct: 352 VDAWA 356


>gi|254775033|ref|ZP_05216549.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 384

 Score =  353 bits (906), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 121/385 (31%), Positives = 185/385 (48%), Gaps = 31/385 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
            MYVCG T YD  H+G+A   + FD++YR  ++      V YV+N+TD+DD ++ERA ++
Sbjct: 12  TMYVCGITPYDATHLGHAATYLAFDLIYR--QWLDLGHDVHYVQNVTDVDDPLLERAARD 69

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                       +  +    F +D   L  LAP     AT  I  ++ L++ ++  G AY
Sbjct: 70  ------GIDWRALAEREVSLFREDMAALRILAPRDYVGATEAIADVVELVEKMLASGAAY 123

Query: 147 EANN---EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTP 199
             +    +I +   +   +G  S    +            P++  K +  D +LW+ + P
Sbjct: 124 VVDGEFPDIYYRADATLQFGYESGYDRETMLRLFAERGGDPQRPGKTDALDALLWRAARP 183

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C     
Sbjct: 184 GEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVRGER 243

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
           + A  ++H G +  +G KMSKS GN + +++L       GR      IRL +L  HYR  
Sbjct: 244 RFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLR------GRGVEPAAIRLGLLAGHYRGD 297

Query: 320 IDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAIQALHKLARE 374
             ++ Q L EA   L +W   +      D       V   L +DLNT  A+ AL     +
Sbjct: 298 RYWSDQVLDEATARLRRWRTATALPAGPDATDVIARVRQYLADDLNTPKALAALDGWTTD 357

Query: 375 STK--NHDLLP---IFNASAHILGI 394
           +     HD      + +A   +LG+
Sbjct: 358 ALDYGGHDTAAPRLVASAVDALLGV 382


>gi|260578725|ref|ZP_05846633.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
 gi|258603222|gb|EEW16491.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium jeikeium ATCC 43734]
          Length = 415

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 130/414 (31%), Positives = 203/414 (49%), Gaps = 35/414 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T +  +   + I    + MYVCG T YD  H+G+A   + FD+++R LR   G
Sbjct: 17  PQLRLYDTADDVVKPVE-IPAGEVGMYVCGITPYDSTHLGHAATYLTFDLIHRYLRA--G 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+NITD+DD + ERA ++            + +     F  D   LA + P   
Sbjct: 74  GHGVHYVQNITDVDDPLFERAERD------GVDWQDLGTSQIDLFRSDMEDLAVIPPRDY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS----IPNYGSFSRRKIDEQKM--- 175
             A   I ++I ++  ++  G AY+   +   D  +    +P +G  SR   ++      
Sbjct: 128 IGAMESIDEVIEMVAKLLEVGAAYQLEGDEYPDIYADYTFLPQFGYESRYSEEQMAEFFA 187

Query: 176 -GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                PE+  K++P D +LW+     EP W+SP+G GRPGWHIECSA++ + LG  F I 
Sbjct: 188 ERGGDPERPGKRHPMDALLWRAHREGEPKWDSPFGPGRPGWHIECSAIAVNRLGAPFAIQ 247

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE     +  A  +++ A+ ++H G + L+G KMSKS GN + +++L   
Sbjct: 248 GGGSDLRFPHHEFSATHAEAAHGVDRMAHHYVHTGMIGLDGTKMSKSLGNLVFVSKLTAA 307

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPA--- 350
                       IRL +   HYR+  D+T   L  AE  L+ W    +T    +D A   
Sbjct: 308 ------GHEPAAIRLGVYAGHYRQDRDWTNDVLAHAEHRLASWRAALATGSTPLDEAREL 361

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLL-----PIFNASAHILGIEV 396
              V   L NDL+T +A+ AL   A ++             I  A   +LG+ +
Sbjct: 362 VATVRGHLANDLDTAAALDALDGWAADTKAGAAGDEAAASEIKTAIDALLGVRL 415


>gi|19552728|ref|NP_600730.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|62390397|ref|YP_225799.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
 gi|41325734|emb|CAF21523.1| PUTATIVE CYSTEINE TRNA SYNTHETASE [Corynebacterium glutamicum ATCC
           13032]
          Length = 420

 Score =  353 bits (905), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 124/417 (29%), Positives = 200/417 (47%), Gaps = 38/417 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            +++++T ++++   +     +   + MYVCG T YD  H+G+A   + FD++YR+L   
Sbjct: 18  PLELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL--L 75

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V YV+NITD+DD + ERA ++            + +     F  D   L+ + P 
Sbjct: 76  DNDHDVHYVQNITDVDDPLFERAARD------GVDWRDLGTSQINLFRSDMEALSIIPPK 129

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM- 175
               A   I ++I +++ ++  G AY   +    D     ++   +G  S          
Sbjct: 130 DYIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAEF 189

Query: 176 ---GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                  PE+  KKNP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  FD
Sbjct: 190 FAERGGDPERPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSFD 249

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ L 
Sbjct: 250 IQGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRLT 309

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV- 351
                         IRL +   HYR   D+  + L  AE  L+ W + + +    + A+ 
Sbjct: 310 AA------GHEPGAIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAIA 363

Query: 352 -----LSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
                 + L  DL+T  A+ A+   A       D          +  A   +LG+++
Sbjct: 364 VVEQLRAHLSADLDTPGALAAVDNWAAGIDTTTDSKEFTEVGNIVVAAIDALLGVQL 420


>gi|291242855|ref|XP_002741321.1| PREDICTED: cysteinyl-tRNA synthetase 2, mitochondrial-like, partial
           [Saccoglossus kowalevskii]
          Length = 424

 Score =  352 bits (904), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 172/347 (49%), Gaps = 24/347 (6%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +YN+L R          +  + Y+CGPTVYD AHIG+A   + FDVL R+L  ++ +  V
Sbjct: 77  VYNSLTRTKVPLILQKDNIAKWYMCGPTVYDSAHIGHASCYVRFDVLRRILTEFF-DIDV 135

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
             V  +T+IDDKII RAR++            +      +F  D   L  L  T   R T
Sbjct: 136 VMVMGVTNIDDKIINRAREKDV------DFKQLARIYENEFASDMQALKVLPATVYTRVT 189

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI--PNYGSFSRRKIDEQKMGTRVPEKY 183
           ++IPQ++  +QNII  G AY   +  + FD  +     Y         +     R   + 
Sbjct: 190 DYIPQILVFVQNIIDTGCAYSTPSGSVYFDVEAFGIERYAKLMPHVRHD---HGRHIVEP 246

Query: 184 HKKNPADFILWKRSTPMEPGWESPWG--RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K++  DF LWK + P EP W SPWG  +GRPGWHIECS MSS   G   DIH GG+DL 
Sbjct: 247 EKRHLRDFALWKAAKPGEPWWSSPWGQGKGRPGWHIECSTMSSAIFGNALDIHTGGIDLA 306

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNG--FLNLEGRKMSKSNGNFITINELLETKKFGG 299
           FPHH+NEIAQ     +  +  N ++H+G   L  +  KMSKS GN IT+ + L       
Sbjct: 307 FPHHDNEIAQCEACHQTHQWTNYFLHSGILHLKDDAEKMSKSIGNTITVQDYL------- 359

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           +   A   R+  L+T Y   I++    + +A  +L       +    
Sbjct: 360 QKHTANQFRMICLLTKYSHNIEYCEDIVMQASSILHTLSAFLSDADA 406


>gi|330805180|ref|XP_003290564.1| hypothetical protein DICPUDRAFT_155084 [Dictyostelium purpureum]
 gi|325079310|gb|EGC32916.1| hypothetical protein DICPUDRAFT_155084 [Dictyostelium purpureum]
          Length = 591

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 133/529 (25%), Positives = 222/529 (41%), Gaps = 96/529 (18%)

Query: 2   KKKIKIYNTLE-RKITEFQA-----IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR 55
              I++ N+L   +            +   I  Y CGPTVY  +HIG+AR  +  D++ R
Sbjct: 52  DTGIQVKNSLANHQKVPLLISNSNIKNQRPISWYTCGPTVYSSSHIGHARNYVTVDIIQR 111

Query: 56  LLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +L+ Y+    + +V  +TDIDDKI+ ++R++        + S ++    ++F++D   L 
Sbjct: 112 ILQDYFRLN-IIHVMGMTDIDDKILIKSREKQ------ISASELSRIYEKEFIEDLKSLN 164

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
              P    R + H+ ++I  I+ I  +   YE+   I F+          + R I+E   
Sbjct: 165 IKPPMFTTRVSEHMGEIINYIEKIRDNNLTYESTKSIFFNVEKFGFDRYSTLRAINEHGE 224

Query: 176 GTRVPEKYHKKNPADFILWKRS--------TPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
              +     KK+  DF+LWK               GWESP+G+GRPGWHIECSAM +   
Sbjct: 225 SKDL-VDDTKKSNQDFVLWKSFNKDLDYDGKNEAVGWESPFGKGRPGWHIECSAMINSIF 283

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLNLEGRKMSKS 281
           G   D+H GG+DL FPHH+NEIAQ              + AN ++H G L+L+  KMSKS
Sbjct: 284 GNHLDVHSGGIDLEFPHHQNEIAQCEGHHSECNKDGSYQWANYFLHVGHLHLKNVKMSKS 343

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-EILL------ 334
             N ITI + L+        +    +R   L+  Y +P+ ++ + L    E  L      
Sbjct: 344 LNNVITIRDFLD-------KYTPNTLRWLCLIHRYTDPLVYSDETLKLCVEKELLFINWF 396

Query: 335 ----SKWPQTSTSKGIIDPAVLSA-----------------LYNDLNTVSAIQALHKLAR 373
               +K  +   S   +      +                 L ND +T + +++L  L +
Sbjct: 397 KFVQNKLDEELVSVDKVKKTFNDSAALLEQLSNTKLKVEKDLANDFDTPAVVESLQSLMK 456

Query: 374 ESTKNHDLLPI---------FNASAHILGIEVCKEHL------NKNISIAIEKLVQERLI 418
           ++ ++ D +             +  ++ G++V           +      +E L+  R  
Sbjct: 457 QTRESIDTIDTDLLYNIQDYIKSILNVFGLDVSNLSNLPTNVGDNTNEFLLETLMDLRSD 516

Query: 419 LL-----------------KMKKFSSADYIRKQ-LESKGFILEDYKNPD 449
           L                  K K +   D +R + L      + D  N D
Sbjct: 517 LKKLLKDVPNSQDPSFKEIKSKLYKITDQVRDKCLSEINLKVSDNANND 565


>gi|145594700|ref|YP_001158997.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
 gi|310947216|sp|A4X6W9|MSHC_SALTO RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|145304037|gb|ABP54619.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
          Length = 404

 Score =  351 bits (901), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 113/375 (30%), Positives = 180/375 (48%), Gaps = 29/375 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + ++++  R              MYVCG T YD  H+G+A  MI FD++ R+ R    +
Sbjct: 10  PLMLFDSARRGTAASAPTGTG--TMYVCGITPYDATHLGHAATMITFDLIQRVWRDAGLD 67

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYV+N+TDIDD ++ERA ++       +   ++  + T  F +D   L  + P H  
Sbjct: 68  --VTYVQNVTDIDDPLLERAARD------GEDWKVLAMRETALFREDMEALRIIPPEHYV 119

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM----G 176
            A   IP +   +  ++  G AY       ++ FD S+ P +G  S    ++        
Sbjct: 120 GAVESIPDIAERVLMLVKEGAAYRLEDGTGDVYFDISATPRFGYESHLSREQMLEIFPER 179

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHG 235
              P++  K++P D +LW+ +   EP W     G GRPGWHIEC+ ++ + LG   D+ G
Sbjct: 180 GGDPDRAGKRDPLDPLLWRGARADEPSWPGGDLGPGRPGWHIECAVIALNLLGAQIDVQG 239

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A +         A  ++H G + L+G KMSKS GN + ++ L    
Sbjct: 240 GGNDLIFPHHECSAAHAELLTGQTPFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRAD- 298

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-GIIDPAVLSA 354
                      +RLA++  HY     +  + L  A+  L +W + +    G    A L+A
Sbjct: 299 -----QVDPMAVRLALMSGHYHSDRSWNDELLATAQKRLGRWRKAAAMPCGPSAEAFLAA 353

Query: 355 ----LYNDLNTVSAI 365
               L +DL++  A+
Sbjct: 354 LRGRLADDLDSPGAL 368


>gi|158316655|ref|YP_001509163.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
 gi|310947183|sp|A8LH67|MSHC_FRASN RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|158112060|gb|ABW14257.1| Cysteine--tRNA ligase [Frankia sp. EAN1pec]
          Length = 444

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 111/370 (30%), Positives = 174/370 (47%), Gaps = 25/370 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++ +T    +          +R+Y CG T YD  H+G+A   + +D++ R+LR    
Sbjct: 40  RDLRVLDTAHGGVRTLDL--GPTVRLYACGITPYDATHLGHAFTYLTYDLVQRVLRDAGH 97

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV+N+TD+DD ++ERA               +  +    F  D T L  L P H 
Sbjct: 98  E--VRYVQNVTDVDDPLLERA------TRDGIDWRDLARREIDLFRADMTALRILPPDHY 149

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTR 178
                 +  ++ ++  ++  G AY  + ++ F  ++ P++G  +     +          
Sbjct: 150 VGVVEAVGLIVDMVSQLVERGAAYSVDGDLYFSVAAAPDFGQVAHLDPAQMLVSCAEHGG 209

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P +  KK+P D +LW+   P EP W SP+G GRPGWH+ECSA++ HYLG   DI GGG 
Sbjct: 210 DPGRPGKKDPLDPLLWRAERPGEPSWPSPFGPGRPGWHVECSAIARHYLGATIDIQGGGS 269

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHE   A +  A+     A  ++H   ++L+G KMSKS GN   ++ LL      
Sbjct: 270 DLAFPHHECSAAHAEVANGARPFARAYVHTALVSLDGHKMSKSRGNLEFVSRLL------ 323

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLS 353
            R      IRLA+L  H+    ++T   +  A   L +W          D       V  
Sbjct: 324 ARGADPAAIRLALLQHHHTVEWEWTAAAMPAAAERLDRWRAAVALPSGPDFRPVLAEVRD 383

Query: 354 ALYNDLNTVS 363
            L +DL+   
Sbjct: 384 RLADDLDAPG 393


>gi|61216674|sp|Q8NQC4|MSHC_CORGL RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|21324282|dbj|BAB98907.1| Cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
          Length = 404

 Score =  351 bits (900), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 124/418 (29%), Positives = 200/418 (47%), Gaps = 38/418 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
             +++++T ++++   +     +   + MYVCG T YD  H+G+A   + FD++YR+L  
Sbjct: 1   MPLELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL-- 58

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
              +  V YV+NITD+DD + ERA ++            + +     F  D   L+ + P
Sbjct: 59  LDNDHDVHYVQNITDVDDPLFERAARD------GVDWRDLGTSQINLFRSDMEALSIIPP 112

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM 175
                A   I ++I +++ ++  G AY   +    D     ++   +G  S         
Sbjct: 113 KDYIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAE 172

Query: 176 ----GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                   PE+  KKNP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  F
Sbjct: 173 FFAERGGDPERPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSF 232

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI GGG DLIFPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ L
Sbjct: 233 DIQGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRL 292

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                          IRL +   HYR   D+  + L  AE  L+ W + + +    + A+
Sbjct: 293 TAA------GHEPGAIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAI 346

Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
                  + L  DL+T  A+ A+   A       D          +  A   +LG+++
Sbjct: 347 AVVEQLRAHLSADLDTPGALAAVDNWAAGIDTTTDSKEFTEVGNIVVAAIDALLGVQL 404


>gi|255084145|ref|XP_002508647.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
 gi|226523924|gb|ACO69905.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
          Length = 744

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 137/599 (22%), Positives = 225/599 (37%), Gaps = 157/599 (26%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMI--------VFDVLY--- 54
           ++ N+  +    F  +D + +  Y+CGPTVYD AH+G+AR  +        + D      
Sbjct: 43  RLLNSFTKTKVPFVPLDGNRVGWYICGPTVYDSAHMGHARNYVNFDVIRRVMTDYFRYDV 102

Query: 55  RLLRYYYGEKCVTYVRNITDIDDKIIERARQEH--------------------------- 87
           R +           +R      + +I  A                               
Sbjct: 103 RFIMNVTDIDDKIVMRAHLRRSEAMIAAAEAVGGLDALIAPLKALLASGEKNLGEQEALT 162

Query: 88  -----------------PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                            P   + D    +      +F++D   +    P    R + +  
Sbjct: 163 ASLCAAIVAKDPTKVADPDWTVQDGYLALAHAFEAEFMEDMRLMGVARPDALTRVSEYTE 222

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKM-----GTRVP 180
           +++  IQ II  G+AYE+N  + FD  +        Y   ++  +   ++     G    
Sbjct: 223 KIVQYIQTIIDRGYAYESNGSVYFDVPTFEQSPNHKYAKLNKEALKNVELAMDGEGALAA 282

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K+   DF+LWK S P EP W SPWG GRPGWHIECSAM S  LG+  DI+GGG+DL
Sbjct: 283 DASEKRAENDFVLWKASKPGEPRWPSPWGLGRPGWHIECSAMCSDILGEAVDINGGGIDL 342

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHEN++AQS     I++  N ++H G L+++G KMSKS  NFITI   L+       
Sbjct: 343 NFPHHENQLAQSEAHYDIKQWVNYFVHTGHLHIDGLKMSKSLKNFITIRAALKM------ 396

Query: 301 SWPAPVIRLAMLMTHYREPIDFTV----------QRLTEAEILLSKW------------- 337
            + A  IR   L+  + +P+D T           Q++  A I    +             
Sbjct: 397 -YTARQIRFLFLLHQWSDPMDLTPVQEGDAVTGFQQMEAAVIAEKTFVEFFHSVKGALRG 455

Query: 338 -------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK- 377
                                 S++       V +A+ +++NT + I++L +L     K 
Sbjct: 456 LGCAAGYSVDQEHTWGDEERALSSAIDAARAGVHAAMIDNINTPAVIKSLKELVGGVNKY 515

Query: 378 -----NHDLLPIFNASA--------HILGI----------------------EVCKEHLN 402
                   + P+   SA          LG+                      +  +E + 
Sbjct: 516 LGSVAADAVRPLLVESAARYVTMILACLGVAETTGGIGLGDIAGGGGEGRGSDSKEEAMA 575

Query: 403 KNISIAIEKLVQERLILLKMKKFSSA-----DYIRK-QLESKGFILEDYKNPDNGQRMT 455
             + + ++   + R +       + A     D +R   L   G  L+D +     +  T
Sbjct: 576 PVLDLVVKFRDEIRALARSGAD-AKALMQACDRVRDVGLPELGVKLDDREGGALWKLST 633


>gi|145295647|ref|YP_001138468.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum R]
 gi|310947181|sp|A4QEA0|MSHC_CORGB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|140845567|dbj|BAF54566.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 420

 Score =  350 bits (899), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 122/417 (29%), Positives = 199/417 (47%), Gaps = 38/417 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            +++++T ++++   +     +   + MYVCG T YD  H+G+A   + FD++YR+L   
Sbjct: 18  PLELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL--L 75

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V YV+NITD+DD + ERA ++            + +     F  D   L+ + P 
Sbjct: 76  DNDHDVHYVQNITDVDDPLFERAARD------GVDWRDLGTSQINLFRSDMEALSIIPPK 129

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM- 175
               A   I ++I +++ ++  G AY   +    D     ++   +G  S          
Sbjct: 130 DYIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAEF 189

Query: 176 ---GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                  P++  KKNP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  FD
Sbjct: 190 FAERGGDPDRPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSFD 249

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DLIFPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ L 
Sbjct: 250 IQGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRLT 309

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV- 351
                         IRL +   HYR   D+  + L  AE  L+ W + + +    + A+ 
Sbjct: 310 AA------GHEPGAIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAIA 363

Query: 352 -----LSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
                 + L  DL+T  A+ A+   A                  +  A   +LG+++
Sbjct: 364 VVEQLRAHLSADLDTPGALAAVDNWAAGIDTTAGSKEFTEVGNIVVAAIDALLGVQL 420


>gi|302546650|ref|ZP_07298992.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces hygroscopicus ATCC 53653]
 gi|302464268|gb|EFL27361.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Streptomyces himastatinicus ATCC 53653]
          Length = 373

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 116/335 (34%), Positives = 171/335 (51%), Gaps = 23/335 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          + P  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTATGGP---ITLTPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TDIDD ++ERA      +   D  + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDIDDPLLERA------VANGDDWTALAERETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ +   G AYE   +I F   S P +GS SR   +  ++ +    
Sbjct: 126 YIGAVESIPGIVPLVERLRDAGAAYEVEGDIYFSVESDPAFGSVSRLDAEAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  +   EP W+    G GRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWVAAREGEPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGERPFAQSYVHAGMVGLNGEKMSKSKGNLVFVSALRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
                     IRLA+L  HYR   ++T   L +AE
Sbjct: 304 ----GVDPAAIRLALLAHHYRSDWEWTDGVLRDAE 334


>gi|15841621|ref|NP_336658.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|13881872|gb|AAK46472.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
          Length = 375

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 122/389 (31%), Positives = 183/389 (47%), Gaps = 34/389 (8%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD+++RL      E  + YV+NITDIDD + ERA ++ 
Sbjct: 1   MYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGHE--LHYVQNITDIDDPLFERADRD- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                      +       F +D   L  L P     AT  I +M+ LI+ ++  G AY 
Sbjct: 58  -----GVDWRDLAQAEVALFCEDMAALRVLPPQDYVGATEAIAEMVELIEKMLACGAAYV 112

Query: 148 ANN------EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRS 197
            +       +I F   +   +G  S    D      +     P +  K +  D +LW+ +
Sbjct: 113 IDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGDPRRPGKSDELDALLWRAA 172

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
            P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C   
Sbjct: 173 RPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVSG 232

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
             + A  ++H G +  +G KMSKS GN + ++ L        +      +RL +L  HYR
Sbjct: 233 ERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALR------AQDVEPSAVRLGLLAGHYR 286

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYNDLNTVSAIQALHKLA 372
               ++ Q L EA   L +W   +          +   V   L +DL+T  AI AL    
Sbjct: 287 ADRFWSQQVLDEATARLHRWRTATALPAGPAAVDVVARVRRYLADDLDTPKAIAALDGWV 346

Query: 373 RESTK--NHDLLP---IFNASAHILGIEV 396
            ++ +   HD      +  A   +LG+++
Sbjct: 347 TDAVEYGGHDAGAPKLVATAIDALLGVDL 375


>gi|300121951|emb|CBK22525.2| Cysteinyl-tRNA synthetase [Blastocystis hominis]
          Length = 593

 Score =  349 bits (897), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 147/509 (28%), Positives = 226/509 (44%), Gaps = 75/509 (14%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++ +++  ++   Q      +  Y CGPTVYD +H+G+AR  +  D+L R+L   +G   
Sbjct: 21  RLVDSVSGELKVIQ-QKGKTLSWYSCGPTVYDSSHVGHARTYVQIDLLQRILSRRFGMN- 78

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           +     IT+IDDKII ++RQ             I S+  ++F+ D  RL    P    R 
Sbjct: 79  IHSAMGITNIDDKIINKSRQ------TMIPWQEIASRYEEEFINDMQRLNVKMPMSVVRV 132

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           ++ IP+++  I+ +   G AY+ ++ I FDT SS+  Y       I + +  +R+ +   
Sbjct: 133 SDMIPEIVDYIRVLEDKGIAYKTSSGIYFDTQSSLYKYEKLVP-SISDVESQSRLAQDPE 191

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF LWKR+  ++  W+SPWGRGRPGWHIECS       G   D+H GG+DL FPH
Sbjct: 192 KRHPRDFALWKRADDIDYSWDSPWGRGRPGWHIECSVNCHSLFGDHLDVHAGGIDLRFPH 251

Query: 245 HENEIAQSCCA--DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           H NEIAQ             ++ +H G + +EGRKMSKS  NFITI++LL+T       +
Sbjct: 252 HCNEIAQCEAYSGGGGGAWCDMMLHIGHIFIEGRKMSKSLKNFITIDQLLQT-------Y 304

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKG----------- 345
            A   R+  ++ HY   I      L EA+             QT  SKG           
Sbjct: 305 SANDFRMFCMLNHYSARIQLDDNGLVEAQRQWKALEASIHRVQTELSKGSRFGDSDSRVV 364

Query: 346 --------IIDPAVLSALYNDLNTVSAIQA----LHKLARESTKNHDLLP------IFNA 387
                        +  +L ND NT   +      LH++ +   +N   L       I N 
Sbjct: 365 RRWLEKWNETKTKIDESLANDSNTRQVVSETQNLLHEIEKCLLENRQALAGRVASLIANE 424

Query: 388 SAHI---LGIEVCKEHLNKNISIAIEKLVQERLILLK--MKK---------FSSADYIRK 433
              +   LG     +         I+ L + R  +    +K            + D +R+
Sbjct: 425 MIDLYTDLGFVFDAKPTEMRDKEMIDALCEFRSAVRTICLKDTHSEVSREVLQACDALRQ 484

Query: 434 QLESK-GFILEDYKNPDNGQRMTRWKQKP 461
               + G  + D K+        RW   P
Sbjct: 485 SASDRFGITIIDGKSD------VRWVVGP 507


>gi|330468546|ref|YP_004406289.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
 gi|328811517|gb|AEB45689.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
          Length = 395

 Score =  349 bits (896), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 122/411 (29%), Positives = 190/411 (46%), Gaps = 37/411 (9%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +Y++  + +       P    MYVCG T YD  H+G+A  MI FD++ R+ R    E  V
Sbjct: 1   MYDSARQAVHPTDP--PGTATMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGHE--V 56

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N+TDIDD ++ERA ++       +   ++  + T  F +D   L  + P H   A 
Sbjct: 57  RYVQNVTDIDDPLLERAERD------GEDWKVLAMRETALFREDMEALRIIPPAHYIGAV 110

Query: 127 NHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM----GTRV 179
             IP++   +  ++    AY  +    ++ FD S+ P +G  S     E           
Sbjct: 111 ESIPEIAEKVLVLLKDDAAYRLDDGTGDVYFDISAAPRFGYESNLSRAEMLELFPERGGD 170

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           P++  K++P D +LW+ +   EP W     G GRPGWHIEC+ ++   LG   D+ GGG 
Sbjct: 171 PDRAGKRDPLDPLLWRGAREGEPSWPGGELGPGRPGWHIECTVIALALLGNTIDVQGGGN 230

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLIFPHHE   A +         A  ++H G + L+G KMSKS GN + ++ L   K   
Sbjct: 231 DLIFPHHECSAAHAERLTGAAPFAGHYVHAGMIGLDGEKMSKSLGNLVFVSRLRADK--- 287

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-KWPQTSTSKGIIDPAVLSA--- 354
                   +RLA+L  HYR    +T   L  A   L       +   G    A L+A   
Sbjct: 288 ---VDPMAVRLALLSGHYRADRSWTDDLLATAHQRLDRWRRAAAAPAGPSGEAFLAAVRD 344

Query: 355 -LYNDLNTVSAIQALHKLAREST-------KNHDLLPIF-NASAHILGIEV 396
            L +DL++  A++   + A ++         +     +F      +LGI +
Sbjct: 345 RLSDDLDSPGALRLADEWADQTLTPSPDTPTDPTAPALFSRTLDALLGIRL 395


>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
 gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
          Length = 466

 Score =  349 bits (896), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 140/429 (32%), Positives = 193/429 (44%), Gaps = 95/429 (22%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              L CL PT +PR T HI  +I LI  II +GH Y    ++ F   S P Y   S RK+
Sbjct: 1   MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKL 60

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           D+ + G RV     K+NPADF LWK +   EP WESPWG GRPGWHIECSAMS+HYLG V
Sbjct: 61  DQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHV 120

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           FDIHGGG DLIFPHHENE+AQS  A    +    W+HNGF+N + +KMSKS  NF TI +
Sbjct: 121 FDIHGGGRDLIFPHHENELAQSRAAYPESE-VICWMHNGFVNKDDQKMSKSENNFFTIRD 179

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EILLSK 336
           ++         +    +R  ++ THYR  ++ + + + +A              E +LSK
Sbjct: 180 IISL-------YHPMALRYFLIRTHYRSDVNHSDKAIEKASDRVYYIYKTLYDCEEMLSK 232

Query: 337 WPQTSTSKGII----------DPAVLSALYNDLNTVSAI---QALHKLARESTKNHD--- 380
           + +   S  +             A L  + +DL T   +     L  L +    N +   
Sbjct: 233 YHEEGISVPVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLLKAINSNMNDLK 292

Query: 381 --------------------------------------LLPIFNASAHILGIEV---CKE 399
                                                 L         +LG+       E
Sbjct: 293 KLQQKLEQQQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSVLGLMPPSSLSE 352

Query: 400 HLNKNISIAIEK----------LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            LN+    A+++           +++R +  K K+F  +D IRK L + G  L D     
Sbjct: 353 VLNQLKDKALKRANLTEEQLQEQIEQRTVARKNKQFEVSDEIRKHLATLGISLMDEPT-- 410

Query: 450 NGQRMTRWK 458
                T W+
Sbjct: 411 ----GTSWR 415


>gi|239932256|ref|ZP_04689209.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291440619|ref|ZP_06580009.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291343514|gb|EFE70470.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 409

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 118/365 (32%), Positives = 175/365 (47%), Gaps = 26/365 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++I++T                R+YVCG T YD  HIG+A     FD++ R+      
Sbjct: 17  RDLRIHDTATGGPVTLAP--GPVARIYVCGITPYDATHIGHAATYNAFDLVQRVW--LDT 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           ++ V YV+N+TD+DD ++ERA ++            +  + T  F +D T L  L P H 
Sbjct: 73  KRQVHYVQNVTDVDDPLLERAERDGLDWA------ALAEQETALFREDMTALRMLPPRHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
             A   IP ++ L++ +   G AYE   +I F   S P++G  S       ++ +     
Sbjct: 127 TGAVEAIPGIVPLVERLRDLGAAYELEGDIYFSVESDPHFGQVSHLDAAAMRLLSAERGG 186

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GGG
Sbjct: 187 DPDRPGKKNPVDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALEHLGMGFDVQGGG 246

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DLIFPHHE   + +         A  ++H G + L G KMSKS GN + ++ L      
Sbjct: 247 SDLIFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSRLRRD--- 303

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVL 352
                    IRLA+L  HYR   ++T Q L +A   L  W    +         +   + 
Sbjct: 304 ---GVDPAAIRLALLAHHYRADWEWTDQVLQDAVTRLGHWRAAVSRPDGPPAEALVEEIR 360

Query: 353 SALYN 357
            AL N
Sbjct: 361 EALAN 365


>gi|240171407|ref|ZP_04750066.1| cysteinyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 383

 Score =  349 bits (895), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 119/394 (30%), Positives = 181/394 (45%), Gaps = 34/394 (8%)

Query: 23  PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
                MYVCG T YD  H+G+A   + FD+++RL         V YV+N+TD+DD + ER
Sbjct: 4   GPKATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLG--HDVQYVQNVTDVDDPLFER 61

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
           A ++            +  +  + F  D   L  L P     AT  + +M+ LI+ ++  
Sbjct: 62  ADRD------GVDWRELADREVKLFRADMEALRVLPPHDYVAATEAVAEMVELIEKMLAS 115

Query: 143 GHAYEANN------EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFI 192
           G AY  +       +I +   +   +G  S    D      +     P +  K +  D +
Sbjct: 116 GAAYTVDPEIGDYPDIYYRADATVQFGYESGCDRDTMLTLFEQRGGDPSRPGKTDQLDAL 175

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           LW+ +   EP W SP+G GRPGWH+EC+A++   +    DI GGG DLIFPHHE   A +
Sbjct: 176 LWRAARAGEPSWPSPFGPGRPGWHVECAAIALSRINSGLDIQGGGSDLIFPHHEFTAAHA 235

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            C     + A  ++H G +  +G KMSKS GN + ++ L        +      +RL +L
Sbjct: 236 ECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTLR------AQGVEPSAVRLGLL 289

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----VLSALYNDLNTVSAIQA 367
             HYRE   +T Q L EA   L +W   +      D A     V   L +DL+T  AI A
Sbjct: 290 AGHYREDRFWTHQVLDEAAGRLQRWRTATALPAGPDAADVIARVRRYLADDLDTPKAIAA 349

Query: 368 LHKLAREST-----KNHDLLPIFNASAHILGIEV 396
           L   A ++             +  A   +LG+++
Sbjct: 350 LDGWATDALEYGGHDESAPTSVATAIDALLGVDL 383


>gi|260903707|ref|ZP_05912029.1| cysteinyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 419

 Score =  349 bits (895), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 116/415 (27%), Positives = 188/415 (45%), Gaps = 43/415 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++T  R     +  D +   +YVCG T YD  H+G+A   + FD+L R+ R    +  V
Sbjct: 21  VFDTGTRSPRRLKGRDQA-AGLYVCGITPYDATHLGHAATYVAFDLLNRVWRDAGLD--V 77

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N TD+DD ++ERA               +     + F +D + L  L P       
Sbjct: 78  VYVQNTTDVDDPLLERADA------TGVDWRELAESQIELFREDMSALRVLPPQSYIGVV 131

Query: 127 NHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSS--IPNYGSFSR------RKIDEQKMGT 177
             + Q++  +++++    AY  +  ++ +  S+   P +GS S        K+  ++ G 
Sbjct: 132 ESVDQIVKAVEDLVDSRAAYTLDNGDVYYRVSTPINPPFGSVSHDDRATMAKLSAERGG- 190

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             PE   K N  D +LWK +   EP W+    G GRPGWHIEC+ ++  Y G   D+ GG
Sbjct: 191 -DPETPGKDNEIDPLLWKAAREGEPSWDGGKLGPGRPGWHIECTVIADKYAGLPVDVQGG 249

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHE   A +  A +    A  ++H G +  +G KMSKS GN + +++L E   
Sbjct: 250 GSDLVFPHHEMSAAHA-AAWKQTPLARTYMHTGMVGYQGEKMSKSKGNLVLVSKLRE--- 305

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------ 350
              +     VIR  +L  HYR   +FT   L  A   L  W   +  +            
Sbjct: 306 ---QGVDPMVIRTVLLSNHYRSDWNFTEDLLETASARLKAWRHAAMCEAECREGLRGHII 362

Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
             +  +L +DL++  A+  L + A     +            + +A   +LGI +
Sbjct: 363 GLLRESLADDLDSPRALGILDEWAEHYADSPAAETAPVCGDRVADAVDALLGINL 417


>gi|54024903|ref|YP_119145.1| cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|61216443|sp|Q5YVL0|MSHC_NOCFA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|54016411|dbj|BAD57781.1| putative ATP-dependent L-cysteine:1D-myo-inosityl
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase [Nocardia
           farcinica IFM 10152]
          Length = 412

 Score =  348 bits (894), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 121/412 (29%), Positives = 199/412 (48%), Gaps = 34/412 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++Y+T +R++        +   MYVCG T YD  H+G+A   + FD++ R+LR   G
Sbjct: 17  PPLRLYDTADRQVRPVAP--GATATMYVCGITPYDATHLGHAATYLTFDLVNRVLRD--G 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TD+DD + ERA ++            + S+  + F  D   L  L P   
Sbjct: 73  GHDVHYVQNVTDVDDPLFERAARD------GVDWRELGSREIELFRTDMAALRVLPPREY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK---- 174
             A   + +++  +Q ++ +G AY  ++    +I F T +   +G  S       +    
Sbjct: 127 VGAVESVEEVVEFVQKLLANGAAYVVDDPDFPDIYFRTDATEQFGYESGYDRATMERLFA 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K++P D +LW+ + P EP W +P+G GRPGWHIECSA++ + LG  FDI 
Sbjct: 187 ERGGDPDRPGKRDPLDALLWRAARPGEPSWPAPFGAGRPGWHIECSAIALNRLGPEFDIQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLI+PHHE   A +       + A  ++H G + L+G KMSKS GN + ++ L + 
Sbjct: 247 GGGSDLIYPHHEYSAAHAESVVAGRRFARHYVHAGLIGLDGEKMSKSRGNLVLVSTLRKD 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDP 349
                       IRL +L  HYR+   +T   L  A   L++W   +      +      
Sbjct: 307 ------GVDPAAIRLGLLDGHYRQDRMWTDAVLEAALARLARWRSATALSAGPAAHDTIA 360

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIEV 396
            +   L +DL++  A+ A+     E+       +     I  A   +LG+ +
Sbjct: 361 RLRQHLADDLDSPKALAAVDNWVTEALDYGGSDSGAPAAIAEAVDALLGVRL 412


>gi|118465539|ref|YP_881564.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
 gi|310947192|sp|A0QF76|MSHC_MYCA1 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|118166826|gb|ABK67723.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 384

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 120/385 (31%), Positives = 184/385 (47%), Gaps = 31/385 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
            MYVCG T YD  H+G+A   + FD++YR  ++      V YV+N+TD+DD ++ERA ++
Sbjct: 12  TMYVCGITPYDATHLGHAATYLAFDLIYR--QWLDLGHDVHYVQNVTDVDDPLLERAARD 69

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                       +  +    F +D   L  LAP     AT  I  ++ L++ ++  G AY
Sbjct: 70  ------GIDWRALAEREVSLFREDMAALRILAPRDYVGATEAIADVVELVEKMLASGAAY 123

Query: 147 EANN---EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTP 199
             +    +I +   +   +G  S    +            P++  K +  D +LW+ + P
Sbjct: 124 VVDGEFPDIYYRADATLQFGYESGYDRETMLRLFAERGGDPQRPGKTDALDALLWRAARP 183

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C     
Sbjct: 184 GEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVRGER 243

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
           + A  ++H G +  +G KMSKS GN + +++L       GR      IRL +L  H+R  
Sbjct: 244 RFARHYVHAGMIGWDGHKMSKSRGNLVLVSQLR------GRGVEPAAIRLGLLAGHFRGD 297

Query: 320 IDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAIQALHKLARE 374
             ++ Q L EA   L +W   +      D       V   L +DLNT  A+ AL     +
Sbjct: 298 RYWSDQVLDEATARLRRWRTATALPAGPDATDVIARVRQYLADDLNTPKALAALDGWTTD 357

Query: 375 STK--NHDLLP---IFNASAHILGI 394
           +     HD      +  A   +LG+
Sbjct: 358 ALDYGGHDTAAPRLVATAVDALLGV 382


>gi|218508011|ref|ZP_03505889.1| cysteinyl-tRNA synthetase [Rhizobium etli Brasil 5]
          Length = 245

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 151/242 (62%), Positives = 187/242 (77%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++K+YNTL R+ + F  IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 4   TPELKLYNTLTREKSVFAPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           GE  VTY RNITD+DDKI  RA ++HP +P+N+AI  +T K   QF  D   L CL P  
Sbjct: 64  GENHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNV 123

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           +PRAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG  S+R +DEQ+ G RV  
Sbjct: 124 EPRATDNIEEMIEIIEKLISNGHAYAASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAV 183

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             HKKNP DF+LWK S+  EPGW+SPWGRGRPGWHIECSAMS  YLG +FDIHGGGLDLI
Sbjct: 184 DAHKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLI 243

Query: 242 FP 243
           FP
Sbjct: 244 FP 245


>gi|145344518|ref|XP_001416778.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577004|gb|ABO95071.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 746

 Score =  347 bits (892), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 147/595 (24%), Positives = 228/595 (38%), Gaps = 160/595 (26%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARP-------------MIVFDVLYR 55
           NT  +    F+ +  +++  Y+CGPTVYD AH+G+AR                 +DV  R
Sbjct: 49  NTFTKTKVPFKPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVMMEYFGYDV--R 106

Query: 56  LLRYYYGEKCVTYVRNITDIDDKIIERAR------------------------------- 84
            +           +R  T   + +++ AR                               
Sbjct: 107 FVMNVTDIDDKIIMRAHTRRAEAVVKAARETGETRLGAETLAVEKLLAEGGKPLGALDSA 166

Query: 85  --------------------QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
                                      I D    +  +   +F++D   L    P    R
Sbjct: 167 TRTLANAVKAAIGSGIDAEHCCAKDWTIQDGYLTLAHQFEAEFMEDMKSLGVARPDMLTR 226

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDE-----QK 174
            + ++ ++I  IQ II  G AYE+N  + FD  +        YG  ++  ++        
Sbjct: 227 VSEYVDKVILYIQVIINKGFAYESNGSVYFDVKAFEAAENHKYGKLNQNAMENITEAMDG 286

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G    EK  KK   DF+LWK S   EP W SPWG GRPGWHIECSAM S  LG+  DI+
Sbjct: 287 EGALEAEKSEKKCDFDFVLWKMSKDGEPCWSSPWGMGRPGWHIECSAMCSDILGQSVDIN 346

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG+DL FPHHEN++AQS      E+  N +IH G L+++G KMSKS  NFITI   L+ 
Sbjct: 347 GGGIDLNFPHHENQLAQSEAHYDTEQWVNFFIHTGHLHIDGLKMSKSLKNFITIRAALKM 406

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTV---------------------QRL------ 327
                  + A  IR   L+  + +P++ T                      +RL      
Sbjct: 407 -------YSARQIRFLFLLNQWCDPMELTPVAAPDGSGVIGFKQMDLALSIERLFVEFFH 459

Query: 328 --------------TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
                          + +    +  + S +      AV  AL +++NT + + AL  L +
Sbjct: 460 SIKGVFRTSGSYHVDKQQTWNERERELSDALDTSQAAVHEALIDNINTPNTLLALQDLVK 519

Query: 374 ESTKNH------DLLPIF--------NASAHILGI-------------EVCKEHLNKNIS 406
            + K        D+ P+             + LG+             E   E   + +S
Sbjct: 520 ATNKYLAETGSVDVRPLLLERVGKFVTKILNCLGVCLDTGAVGFPESSEGSSEGREETLS 579

Query: 407 IAIEKLVQERLILLK-------MKKFSSA-DYIRK-QLESKGFILEDYKNPDNGQ 452
             ++ + + R  + K        K+  +A D +R   L   G  L+D +     +
Sbjct: 580 PFLDLMTKFRDDIRKLAQGGASAKELLTACDNLRDVGLPELGVKLDDKEGGALWK 634


>gi|300781182|ref|ZP_07091036.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
 gi|300532889|gb|EFK53950.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
          Length = 412

 Score =  347 bits (891), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 130/414 (31%), Positives = 204/414 (49%), Gaps = 40/414 (9%)

Query: 4   KIKIYNTLERKITEF---QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            + +++T +++  E           I MYVCG T YD  H+G+A   + FD+++R L   
Sbjct: 18  PLTLFDTADQQAKEVDTTATTSGGEIGMYVCGITPYDSTHLGHAATYLTFDLVHRQLNA- 76

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V YV+NITD+DD + ERA ++            +    T  F  D   L+ + P 
Sbjct: 77  -NGHSVHYVQNITDVDDPLFERAERD------GVDWRELGQSQTDLFRTDMEILSVIPPR 129

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNE--------IIFDTSSIPNYGSFSR--RKI 170
               A   + ++I ++Q ++ +G AYE  ++        I    ++   +G  S   R  
Sbjct: 130 DYIGAMESVDEVIAMVQTLLDNGSAYELVDDSGDHPVTDIYAPITATEQFGYESNLDRAT 189

Query: 171 DEQKMGTR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
            E+    R   PE+  K++P D +LW+     EP WE+ +G GRPGWHIECSA++++ LG
Sbjct: 190 MEEYFAERGGDPERTGKRDPLDALLWRGHREGEPSWEARFGAGRPGWHIECSAIATNRLG 249

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             F I GGG DL FPHHE   A +  A  + + A  ++H G + L+G KMSKS GN + +
Sbjct: 250 TQFAIQGGGSDLAFPHHEFSAAHAEAAYDVPRMAGHYVHAGMIALDGVKMSKSLGNLVFV 309

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           ++L E          A  IRLA+   HYR+  DF+   L +AE  L+ W +   ++   D
Sbjct: 310 HKLRE------EGHDASAIRLAVFGGHYRDDRDFSYAVLDQAEQRLANWREALANEVSED 363

Query: 349 PAV------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
            AV       +AL +DLNT  A++ +     +         +  A   +LG+ V
Sbjct: 364 EAVGTVDKLRAALADDLNTPEALRIVDAAHGDHNGI-----VAAALDGLLGVRV 412


>gi|13508095|ref|NP_110044.1| cysteinyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2500964|sp|P75423|SYC_MYCPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1674171|gb|AAB96128.1| cysteinyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 437

 Score =  346 bits (889), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 137/465 (29%), Positives = 217/465 (46%), Gaps = 57/465 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K  + +T+  +      ++   I +Y+CGPTVY+  H+GN RP+IVFDVL R+L+   
Sbjct: 5   EPKFTLIDTVSNQSVV---LEQKQINIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQA-- 59

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V +V+NITDIDDKII+ A+Q+        + + +  +    +     +L  L P  
Sbjct: 60  AQYKVQFVQNITDIDDKIIKIAQQQ------EISEAQLCKQQITAYKSLLKKLNIL-PIK 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             + T+ I +M   I  ++  G AY +      F  S +P YG  + R ++     T   
Sbjct: 113 HLQVTDKIDKMPGYIARLVKKGFAYVSPLGNTYFSVSQLPQYGILANRVVE-----TIED 167

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K+N  DF+LWK++T     W SPWG GRPGWH+EC+ +  +       IHGGG+DL
Sbjct: 168 EATDKRNKLDFVLWKQTTAG-VKWNSPWGWGRPGWHVECAFLIDYSFKDQLTIHGGGVDL 226

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE A        +     W+H G L  E +KMSKS  NF+   + L    F   
Sbjct: 227 KFPHHENENAMHMALY-DKPLTQHWMHIGHLMFENQKMSKSLQNFLLAVDFLTIHDF--- 282

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------SKG 345
                ++R      HY  P+D +   + +A   + +  +                  +  
Sbjct: 283 ----RILRWLFYQKHYYHPLDLSQSLIEQACSDIKRIQKAVNVCRTWFVYSEQSAIPAPK 338

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEV 396
             +P    AL N+LN  +AI  + KL ++   +          + L     + +ILGI  
Sbjct: 339 QFEPVF-KALLNNLNFANAITHIWKLVKQINHDVSKQNLSGLKEHLSHLEWALNILGIGF 397

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              H   N+     +L+++   L K  +   AD +R++L  KG +
Sbjct: 398 KSIHTKLNV-----QLIKKWASLRKNGQLDKADEVRQKLIKKGLL 437


>gi|15827673|ref|NP_301936.1| cysteinyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|221230150|ref|YP_002503566.1| cysteinyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|310947197|sp|B8ZRD9|MSHC_MYCLB RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|13093224|emb|CAC31683.1| cysteinyl-tRNA synthase [Mycobacterium leprae]
 gi|219933257|emb|CAR71397.1| cysteinyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 384

 Score =  346 bits (888), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 185/389 (47%), Gaps = 31/389 (7%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
              MYVCG T YD  H+G+A   + FD+++RL      E  V YV+N+TD+DD + ERA 
Sbjct: 10  KATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGHE--VHYVQNVTDVDDPLFERAD 67

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +             +  +    F  D   L  L P     AT  I +++ L+  +++ G 
Sbjct: 68  RN------GVDWRDLAEREVALFRDDMASLRILPPHDYVAATETIVEIVELVDKMLVSGA 121

Query: 145 AYEANN---EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRS 197
           AY  ++   +I F   +   +G  S    D      +     P +  K    D +LW+ +
Sbjct: 122 AYVIDDEYPDIYFRADATLQFGYESGYDRDTMLRLYEQSGGDPRRPGKNGELDALLWRAA 181

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
            P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C   
Sbjct: 182 RPGEPSWSSPFGPGRPGWHVECAAIALSRIGIGLDIQGGGSDLIFPHHEFTAAHAECVRG 241

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
             + A  ++H G +  +  KMSKS GN + ++ L        +  P   IRL +L  HYR
Sbjct: 242 ERRFARHYVHAGMIGWDEHKMSKSRGNLVLVSTLR------AQGAPPSAIRLGLLAGHYR 295

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-----LYNDLNTVSAIQALHKLA 372
               ++ Q L +A   L +W   ++     D A + A     L +DL+T  AI AL    
Sbjct: 296 ADRFWSSQLLDDAIARLHRWRTAASMPAGPDVADVIARVRGYLADDLDTPKAIAALDGWV 355

Query: 373 RESTK--NHDLLP---IFNASAHILGIEV 396
            ++ +   HD      +  A   +LG+++
Sbjct: 356 TDALEYGGHDAAAPKLLATAIDALLGVDL 384


>gi|300934462|ref|ZP_07149718.1| cysteinyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
          Length = 438

 Score =  346 bits (888), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 122/436 (27%), Positives = 197/436 (45%), Gaps = 56/436 (12%)

Query: 3   KKIKIYNTLERKITEF-QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            ++ +Y+T + +I           I MYVCG T YD  H+G+A   + FD++ R L    
Sbjct: 17  PELCLYDTADDQIRPVSIPPAGKEIGMYVCGITPYDSTHLGHAATYLTFDLINRYLVAAG 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITD+DD + ERA ++            +       F  D   L  + P  
Sbjct: 77  --HQVHYVQNITDVDDPLFERAERD------GVDWRELGDSQIDLFRSDMEALQVIPPRD 128

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRRKIDEQKM-- 175
              A   + +++ ++  ++  G AY+ +++    I  D +    +G  SR          
Sbjct: 129 YIGAIESVGEVVEMVGRLLEVGAAYQLSDDEFADIYADHTFTKQFGYESRYDASTMAELF 188

Query: 176 --GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 PE+  K++P D +LW+     EP W++P+G GRPGWHIECSA++++ LG  F I
Sbjct: 189 AERGGDPERPGKRHPMDALLWRAHREGEPQWDAPFGAGRPGWHIECSAIATNRLGPQFSI 248

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DL FPHHE   A +  A   E+ A+ ++H G + L+G KMSKS GN + +++L  
Sbjct: 249 QGGGSDLRFPHHEFSAAHAEAAHGCERMADHYVHAGMIALDGVKMSKSLGNLVFVSKLTA 308

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------- 339
                        IRL +  +HYR   D++ + L  AE  L  W +              
Sbjct: 309 A------GHEPSAIRLGVYASHYRTDRDWSDEVLATAEQRLRLWREALLALSNHAEKALA 362

Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------HD 380
                          S   I   V + + +DL+T +A+  + + A+E+ K         D
Sbjct: 363 ETEETKDSRTNSAPGSAPQIVQTVRAHIAHDLDTPAALATVDQWAQETIKAATSEGLSED 422

Query: 381 LLPIFNASAHILGIEV 396
              +      + GI++
Sbjct: 423 PTAVKRGLDTLFGIDL 438


>gi|290961655|ref|YP_003492837.1| cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
 gi|310947223|sp|C9Z2Z3|MSHC_STRSW RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|260651181|emb|CBG74302.1| putative cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
          Length = 409

 Score =  346 bits (887), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 117/365 (32%), Positives = 180/365 (49%), Gaps = 28/365 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          +DP  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLRIHDTAT---DGLITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA ++            +  K T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERAARDDIDWV------ALAEKETALFREDMTALRMLPPRH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP ++ L++ ++  G AYE   ++ F   + P++G  SR      ++ +    
Sbjct: 126 YIGAVEAIPGIVPLVERLLASGAAYELEGDVYFSVEADPDFGKVSRLDAATMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  KKNP D +LW  +   EP W+    GRGRPGWHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPDRAGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L     
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSALRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAV 351
                     IRLA+L  HYR   ++T Q L +A   L +W    +         +   +
Sbjct: 304 ----GVDPAAIRLALLAHHYRADWEWTDQVLQDAVDRLGRWRAAVSRPDGPPAEALVEEI 359

Query: 352 LSALY 356
             AL 
Sbjct: 360 REALA 364


>gi|258652959|ref|YP_003202115.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Nakamurella multipartita DSM 44233]
 gi|310947206|sp|C8X8S1|MSHC_NAKMY RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|258556184|gb|ACV79126.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Nakamurella multipartita DSM 44233]
          Length = 405

 Score =  346 bits (887), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 197/389 (50%), Gaps = 34/389 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +++Y++   ++      DP  +  MYVCG T YD  H+G+A   + FD+++R+     
Sbjct: 17  RPLRLYDSATGEVR---PTDPGPVATMYVCGITPYDATHLGHAATYLAFDLVHRMW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITDIDD ++ERA+++        +   +  +    F  D T L  + P  
Sbjct: 72  AGHQVHYVQNITDIDDPLLERAQRD------GVSWRKLADREIGLFRDDMTALRVIPPAD 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRK------ID 171
              A   + ++   +Q +I  G AY   +    ++ FD ++   +G  SR        + 
Sbjct: 126 YIGAVEAMDEVTAAVQELIDAGAAYRVPDEQYPDVYFDVTASGQFGYESRYDEATMLRLS 185

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            ++ G   P++  K+   D +LW+   P EP W SP G GRPGWHIEC+ ++ + +G V 
Sbjct: 186 AERGG--DPDRPGKRQRLDPLLWRVERPQEPSWSSPMGPGRPGWHIECAVIAGNRIGPVI 243

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+ GGG DLIFPHHE   A +         A  + H G + L+G KMSKS GN + ++ L
Sbjct: 244 DLQGGGSDLIFPHHECSAAHAEVLSGKRPFARHYTHAGMIGLDGEKMSKSRGNLVFVSRL 303

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           L       +      +RL +L  HYR+   ++ + LT AE  L++W   +   G+   +V
Sbjct: 304 L------HQGVDPMAMRLGLLAGHYRQDRAWSDEVLTAAEARLARWRAAAARTGVDADSV 357

Query: 352 LSA----LYNDLNTVSAIQALHKLAREST 376
           + A    L +DL+T + I+AL   A + T
Sbjct: 358 VQAIRDGLADDLDTPTVIEALDAWAADET 386


>gi|288923721|ref|ZP_06417819.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EUN1f]
 gi|288344927|gb|EFC79358.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Frankia sp. EUN1f]
          Length = 401

 Score =  345 bits (886), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 112/364 (30%), Positives = 173/364 (47%), Gaps = 26/364 (7%)

Query: 21  IDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           + P     +YVCG T YD  H+G+A   + +D++ R+LR    E  V YV+N+TD+DD +
Sbjct: 4   LRPGPTASLYVCGITPYDATHLGHAFTYLTYDLVQRVLRDAGHE--VRYVQNVTDVDDPL 61

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           +ERA ++            +  +    F  D T L  L P H       +P ++ +I  +
Sbjct: 62  LERADRD------GIDWRDLARREIDLFRADMTALRVLPPDHYVGVVEAVPLIVEMIGQL 115

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVPEKYHKKNPADFILWK 195
           +  G AY    ++ F  SS   +G  +     +           P +  KK+P D +LW+
Sbjct: 116 VERGAAYSVEGDLYFSVSSAKEFGEVAGLSPAQMLALAAERGGDPGRPGKKDPLDPLLWR 175

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
              P EP W SP+G GRPGWH+ECSA++ H+LG   DI GGG DL+FPHHE   A +  A
Sbjct: 176 AERPGEPSWPSPFGPGRPGWHVECSAIARHHLGAPIDIQGGGSDLVFPHHECSAAHAEVA 235

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                 A  ++H   + L+G KMSKS GN   ++ LL              IRLA+L  H
Sbjct: 236 GGTAPFARAYVHTAMVGLDGHKMSKSRGNLEFVSRLLAG------GADPAAIRLALLHHH 289

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------PAVLSALYNDLNTVSAIQAL 368
           +    ++T   L  A++++ +W   +                V   L + L+   A+ A+
Sbjct: 290 HTVEWEWTPADLPAADLMVRRWRAAAALPAPAAPDAGPLLAVVRERLADGLDAPGAVTAV 349

Query: 369 HKLA 372
            +  
Sbjct: 350 DEWV 353


>gi|281205872|gb|EFA80061.1| cysteinyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 837

 Score =  345 bits (885), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 125/432 (28%), Positives = 186/432 (43%), Gaps = 70/432 (16%)

Query: 9   NTLERKITEFQAI----DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           N+L  +      +        I  Y CGPTVYD AH+G+AR  +  D++ R+L  Y+   
Sbjct: 63  NSLSHEKKP-VPLVLENSGRTISWYTCGPTVYDSAHLGHARAYVSIDIVQRVLTDYFNLN 121

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +V  +TD+DDKII+ +  +        +   +  +   +F++D   L    P    R
Sbjct: 122 -INHVMGMTDVDDKIIKMSATK------GMSFKELARQKELEFIQDMDSLNVRPPLLITR 174

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDTSSIP-NYGSFSRRKIDEQKMGT 177
            + HIP +I  ++ I  +G+AY+ +        ++FDT      YG   +     Q    
Sbjct: 175 VSEHIPNIINFVKQIRENGYAYDVDIPGSTGQSVLFDTGKFGTRYGKLEKENQGAQADEN 234

Query: 178 RVPEKYHKKNPADFILWKRSTPME--------PGWESPWGRGRPGWHIECSAMSSHYLGK 229
              +   K    DF LWK + P+           W SP+G GRPGWHIECS+M     G 
Sbjct: 235 LAIQSDVKLGTRDFALWKSANPITDVDGQGKLVVWNSPFGDGRPGWHIECSSMIHSIFGD 294

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK---------TANIWIHNGFLNLEGRKMSK 280
             D+H GG+DL FPHHENEIAQ                    N ++H G LN++G KMSK
Sbjct: 295 KLDVHAGGIDLKFPHHENEIAQCEAHFSPHPNPATGEYKQWVNYFMHIGHLNIKGLKMSK 354

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--- 337
           S  NFITI E L           A   R   L   Y + I++  +   + +  L ++   
Sbjct: 355 SLKNFITIREYLAKN-------TATSFRWLCLTNRYFDTINYNPKSDEQYQNSLQRFIDW 407

Query: 338 ------------------PQTSTSKGIID------PAVLSALYNDLNTVSAIQALHKLAR 373
                                  +K IID        +  AL +D NT  AI+ +  L +
Sbjct: 408 FNMVEMRMMEPININLTRASYQQAKPIIDLFNLSKNDIHLALTDDFNTPKAIKIMQLLVK 467

Query: 374 ESTKNHDLLPIF 385
           E+  N+  L   
Sbjct: 468 ETMMNNTQLKSI 479


>gi|301633284|gb|ADK86838.1| cysteine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 437

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 137/465 (29%), Positives = 217/465 (46%), Gaps = 57/465 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K  + +T+  +      ++   I +Y+CGPTVY+  H+GN RP+IVFDVL R+L+   
Sbjct: 5   EPKFTLIDTVSNQSVV---LEQKQINIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQA-- 59

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  V +V+NITDIDDKII+ A+Q+        + + +  +    +     +L  L P  
Sbjct: 60  AQYKVQFVQNITDIDDKIIKIAQQQ------EISEAQLCKQQITAYKSLLKKLNIL-PIK 112

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             + T+ I +M   I  ++  G AY +      F  S +P YG  + R ++     T   
Sbjct: 113 HLQVTDKIDKMPGYIARLVQMGFAYVSPLGNTYFSVSQLPQYGILANRVVE-----TIED 167

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           E   K+N  DF+LWK++T     W SPWG GRPGWH+EC+ +  +       IHGGG+DL
Sbjct: 168 EATDKRNKLDFVLWKQTTAG-VKWNSPWGWGRPGWHVECAFLIDYSFKDQLTIHGGGVDL 226

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPHHENE A        +     W+H G L  E +KMSKS  NF+   + L    F   
Sbjct: 227 KFPHHENENAMHMALY-DKPLTQHWMHIGHLMFENQKMSKSLQNFLLAVDFLTIHDF--- 282

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------SKG 345
                ++R      HY  P+D +   + +A   + +  +                  +  
Sbjct: 283 ----RILRWLFYQKHYYHPLDLSQSLIEQACSDIKRIQKAVNVCRTWFVYSEQSAIPAPK 338

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEV 396
             +P    AL N+LN  +AI  + KL ++   +          + L     + +ILGI  
Sbjct: 339 QFEPVF-KALLNNLNFANAITHIWKLVKQINHDVSKQNLSGLKEHLSHLEWALNILGIGF 397

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              H   N+     +L+++   L K  +   AD +R++L  KG +
Sbjct: 398 KSIHTKLNV-----QLIKKWASLRKNGQLDKADEVRQKLIKKGLL 437


>gi|303236112|ref|ZP_07322714.1| putative cysteine--tRNA ligase [Prevotella disiens FB035-09AN]
 gi|302483694|gb|EFL46687.1| putative cysteine--tRNA ligase [Prevotella disiens FB035-09AN]
          Length = 310

 Score =  344 bits (883), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 119/290 (41%), Positives = 161/290 (55%), Gaps = 24/290 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + + IYNTL R+   FQ I   N+ MYVCGPTVY   H+G+ARP I FD+L+R L++   
Sbjct: 2   QNLVIYNTLHRQKERFQPIAAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLQHIGY 61

Query: 63  EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           +  V YVRNITD+          DDKI ++AR E            I    T ++     
Sbjct: 62  K--VRYVRNITDVGHLEHDADEGDDKIEKKARLEQLEPM------EIAQFYTNRYHNAMR 113

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
            L  L+P+ +P AT HI +   L++ I+ +G+AYE+N  I FD +       YG  S R 
Sbjct: 114 MLNVLSPSIEPHATGHIIEQEELVKEIMANGYAYESNGSIYFDVTKYDKDHKYGRLSGRN 173

Query: 170 IDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
           + +    +R       K+N  DF LWKR+ P     W SPW  G PGWH EC+AM   YL
Sbjct: 174 LTDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKYL 233

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           G  FDIHGGG+DL+FPHHE EIAQ+  A + +     W+HN  + + G+K
Sbjct: 234 GNHFDIHGGGMDLVFPHHECEIAQA-VASQGDDMVKYWMHNNMITINGKK 282


>gi|291301962|ref|YP_003513240.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Stackebrandtia nassauensis DSM 44728]
 gi|310947219|sp|D3Q598|MSHC_STANL RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|290571182|gb|ADD44147.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Stackebrandtia nassauensis DSM 44728]
          Length = 431

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 127/422 (30%), Positives = 206/422 (48%), Gaps = 32/422 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++Y+T  + +   +   P   RMYVCG T YD  H+G+A  M+ FDV+ R+ R     
Sbjct: 18  PLRLYDTARQAVHATEP-HPDGARMYVCGITPYDATHLGHAATMVTFDVINRVWRD--NG 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V YV+N+TD+D+ + ERA ++       +   ++  + T  F +D   L+ + P    
Sbjct: 75  HDVAYVQNVTDVDEPLFERAERD------GEDWVVLGMRETALFREDMEALSIIPPKAYV 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQ----KMG 176
            A   +P +  L++ ++  G AY  +    ++ F  ++   +GS S    D         
Sbjct: 129 GAVESMPTIAALVERLVDAGAAYTVDDGTGDVYFPVTATEGFGSESHYDRDTMLRFFGER 188

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              P++  K++P D +LW+     EP WES  GRGRPGWHIEC+A++  +LG   D++GG
Sbjct: 189 GGDPDRSGKRDPLDALLWRGEREGEPSWESRLGRGRPGWHIECAAIALAHLGDRIDVNGG 248

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHE   A +  A +    A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 249 GNDLIFPHHEFSAAHAEAATKAVPFAKHYVHAGMIGLDGEKMSKSRGNLVFVSRLRAD-- 306

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAV 351
                    VIRLA+L  HYRE   +T +    A   L++W +        S       V
Sbjct: 307 ----GVDPAVIRLALLDGHYREDRPWTAELHAAAADRLARWREAMGMSSGASGTTTAQRV 362

Query: 352 LSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
              L +DL+T  A++A+ + A  S        H    + +    +LG+ + +    +  +
Sbjct: 363 RERLSDDLDTPGALRAVDEWAAASLTGAHHDAHAPALVRDTVESLLGVTLLRAVFRQRTT 422

Query: 407 IA 408
            A
Sbjct: 423 SA 424


>gi|262043517|ref|ZP_06016634.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259039133|gb|EEW40287.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 296

 Score =  343 bits (881), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 113/308 (36%), Positives = 156/308 (50%), Gaps = 38/308 (12%)

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            GTR+    +K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG  FDIH
Sbjct: 1   AGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIH 60

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DLIFPHHENEIAQS  A+      N W+H G + +   KMSKS  NF T+ ++L  
Sbjct: 61  GGGSDLIFPHHENEIAQSTSANDG-PYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDILNR 119

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGI 346
                  + A  +R  +L  HYR+P++++ + +  A   L++            S     
Sbjct: 120 -------FDAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDA 172

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVC 397
                  A+ +D NT  A+  L +L RE  +           L        ++LG +E  
Sbjct: 173 WRARFCEAMDDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQS 232

Query: 398 KEHLNKNISI-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
            +   KN S         IEKL+ +R    +M K+  AD +R +L  +G  LED      
Sbjct: 233 ADAFLKNRSDLHPAELQLIEKLIHQRGEARRMGKWDKADRLRNELAEQGIDLEDV----- 287

Query: 451 GQRMTRWK 458
               T W+
Sbjct: 288 -GENTSWR 294


>gi|289705192|ref|ZP_06501594.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micrococcus luteus SK58]
 gi|289558082|gb|EFD51371.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Micrococcus luteus SK58]
          Length = 422

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 123/426 (28%), Positives = 199/426 (46%), Gaps = 51/426 (11%)

Query: 2   KKKIKIYNTLERKITEFQAIDPS----NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLL 57
             ++++++T   +        P        +YVCG T YD  H+G+A   + FD+L+R  
Sbjct: 16  PDRLRLHDTATGR-----TRHPGNDAQRASLYVCGITPYDATHLGHASTYVAFDLLHRYW 70

Query: 58  RYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
           R    E  V YV+N+TD+DD ++ERA               +  + T  F  D   L  L
Sbjct: 71  RAAGLE--VAYVQNVTDVDDPLLERAEA------TGVDWRALAEEQTDLFRADMAALEVL 122

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNY-----GSF 165
           AP H   AT  +  ++  ++ ++  G AY       E + ++ FD  +  +      G  
Sbjct: 123 APGHYVGATEAVGLVVDAVETMLAAGRAYRVPGGDGEPDGDVYFDVRAAQSATDWRLGQV 182

Query: 166 SRRKIDEQKM----GTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECS 220
           S   +DE           P++  K++P D +LW+     EP W+    G GRPGWHIECS
Sbjct: 183 SAMGLDEMAAVFPERGGDPDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIECS 242

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
            +S  +L   F + GGG DL FPHHE   A +   D +   A+ + H G + L+G KMSK
Sbjct: 243 VISRAHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGL-PLAHTYAHTGMVALDGEKMSK 301

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S GN   ++ L        R      +R A+L  HYR   +++ Q L +A+  +++W   
Sbjct: 302 SLGNLELVSRLR------ARGVEPVAVRAAILAHHYRSDWEWSEQVLADAQARVARWRAA 355

Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAH 390
                + +   +  AV +AL +DL+   A++AL   A  +         D +P+ +  A 
Sbjct: 356 LDGPHAAAGVAVLDAVHAALSDDLDAPRALEALDAWAAGTLPGLVEAAADPVPVIDVVAA 415

Query: 391 ILGIEV 396
           +LG+ +
Sbjct: 416 LLGLRL 421


>gi|541386|pir||F53402 cysteine-tRNA ligase (EC 6.1.1.16) - Bacillus stearothermophilus
           (fragment)
          Length = 221

 Score =  342 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 97/226 (42%), Positives = 138/226 (61%), Gaps = 8/226 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++YNTL RK   F+ ++P+ ++MYVCGPTVY++ HIGNAR  IVFD + R L +   
Sbjct: 2   SSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV N TD+DDK+I+ AR+      + +++  I  +  + + +D   L C      
Sbjct: 62  D--VTYVSNFTDVDDKLIKAARE------LGESVPAIAERFIEAYFEDIQALGCKKADIH 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T +I  +I  IQ +I  G+AYE + ++ + T   P YG  S + IDE + G R+   
Sbjct: 114 PRVTENIGTIIEFIQALIDKGYAYEVDGDVYYRTRKFPGYGKLSHQSIDELQAGARIEVG 173

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
             K +P DF LWK +   E  W+SPWG+GRPGWHIECSAM+  YLG
Sbjct: 174 EKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMAGRYLG 219


>gi|281346768|gb|EFB22352.1| hypothetical protein PANDA_014037 [Ailuropoda melanoleuca]
          Length = 468

 Score =  342 bits (879), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 138/479 (28%), Positives = 210/479 (43%), Gaps = 93/479 (19%)

Query: 46  PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQ 105
             + FD++ R+L   +G   +  V  ITD+DDKII RA +      +N + + + +   +
Sbjct: 1   SYVRFDIIRRILTRVFGCN-IIMVMGITDVDDKIIRRAAE------MNVSPASLANLYEE 53

Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YG 163
            F +D   L  L PT   R T +IPQ+I  I+ II +GHAY  A   + FD  SI + YG
Sbjct: 54  DFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAQGNVYFDLRSIGDKYG 113

Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
                           P    K++ +DF LWK + P E  W SPWG+GRPGWHIECS +S
Sbjct: 114 KLVGAVPSPVG----EPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTIS 169

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKS 281
           S   G+  DIH GG DL FPHHENEIAQ     +  +  N ++H+G L+++G   KMSKS
Sbjct: 170 SLVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCRQWGNYFLHSGHLHVKGKEEKMSKS 229

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
             N+ITI + L+T       +P  V RL  + + YR  ID++   + EA+ LL       
Sbjct: 230 LKNYITIKDFLKT-------FPPDVFRLFCMRSAYRSAIDYSDGTMLEAKQLLLAAAAFV 282

Query: 342 TSKGI----------------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                                         AV +AL +D +T +A+ A+  L     +  
Sbjct: 283 EDARAYMKGQLVCGPVRDDVLWERLRHTKDAVKAALADDFDTPAAVDAVMDLVHHGNRQL 342

Query: 380 -----------------DLLPIFNASAHILGIEVCK------EHLNKNISIAIEKLVQER 416
                             ++         +GI +        +     +   +E+LV+ R
Sbjct: 343 KAHAKEPGGPRSPAVFGSIVSYVERFFETVGISLADRQSVSGDSSRATLHSVVEELVRFR 402

Query: 417 LILLKMKKFSSA-----------------------DYIRKQLESKGFILEDYKNPDNGQ 452
           L + +   F+ A                       D +R+ L + G  ++D  +    +
Sbjct: 403 LQVRQ---FALATGAATREARRQQQLDRQPLLEACDALRRDLVTHGISIKDRSSTSTWE 458


>gi|311742513|ref|ZP_07716322.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311314141|gb|EFQ84049.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 412

 Score =  342 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 111/370 (30%), Positives = 180/370 (48%), Gaps = 26/370 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++++             S+ R+YVCG T YD  H+G+A   + FD+L R  R    
Sbjct: 21  SPVRVHDSASGSRVTVDP--DSHARLYVCGITPYDATHLGHAATYLAFDLLQRAWRDRGL 78

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTY +N+TD+DD ++ERA               +    T+ F +D T L  ++P H 
Sbjct: 79  D--VTYTQNVTDVDDPLLERA------TATGVDWVTLAEAQTELFRQDMTALRIISPDHY 130

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTR 178
             A   I  ++ L+  +   G  Y  ++++ FD  +   +GS S       +        
Sbjct: 131 VGAVESIDLVVDLVDRLTGAGATYRVDDDLYFDVHADAGFGSVSGLDEAAMRAVFAERGG 190

Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            P++  K++P D +LW+   P EP W++  GRGRPGWHIEC+A++  +LG  FD+ GGG 
Sbjct: 191 DPDRPGKRHPLDCLLWQAERPGEPAWDTRLGRGRPGWHIECAAIALEHLGTTFDVQGGGS 250

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL+FPHHE   +++  A  +   A  ++H G +  +G KMSKS GN + ++ L       
Sbjct: 251 DLLFPHHEMSASEAAVATGL-PFAGAFVHTGMVGYQGEKMSKSKGNLVLVSRLRAD---- 305

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLS 353
                   IRLA+L  HYR   ++    +  AE  L  W        + +   +   V +
Sbjct: 306 --GHDPMAIRLALLAHHYRTDWEWHDDEIVVAEQRLGAWRSAVHRTVAPAGDALLAEVRA 363

Query: 354 ALYNDLNTVS 363
           AL +DL+   
Sbjct: 364 ALSDDLDAPR 373


>gi|289803124|ref|ZP_06533753.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 294

 Score =  342 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 109/308 (35%), Positives = 155/308 (50%), Gaps = 39/308 (12%)

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
           RV     K+NP DF+LWK S   EP W SPWG GRPGWHIECSAM+   LG  FDIHGGG
Sbjct: 1   RVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGG 60

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHHENEIAQS CA   E   N W+H+G + ++  KMSKS GNF T+ ++L     
Sbjct: 61  SDLMFPHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL----- 114

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIID 348
             + + A  +R  ++  HYR  ++++ + L +A   L +                    +
Sbjct: 115 --KYYDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFE 172

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK-- 398
              + A+ +D NT  A   L  +ARE  +         + +       + +LG+   +  
Sbjct: 173 ARFVEAMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPD 232

Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
                    +      IE L+Q+RL   K K +++AD  R +L   G ILED      G 
Sbjct: 233 VFLQSGAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GP 286

Query: 453 RMTRWKQK 460
           + T W++K
Sbjct: 287 QGTTWRRK 294


>gi|305681204|ref|ZP_07404011.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305659409|gb|EFM48909.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 419

 Score =  342 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 121/389 (31%), Positives = 196/389 (50%), Gaps = 33/389 (8%)

Query: 4   KIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +++Y+T +      + +    +   MYVCG T YD  H+G+A   + FD+++RLL    
Sbjct: 18  PLRLYDTAD---ETLKPVRVTHNQAGMYVCGITPYDSTHLGHAATYLAFDLIHRLL--ID 72

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYV+NITD+DD + ERA               + S     F  D   L+ + P  
Sbjct: 73  AGVQVTYVQNITDVDDPLFERA------TRDGVDWRELGSSQIDLFRSDMADLSVIPPHD 126

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSR----RKIDEQ 173
              A   + ++I ++Q ++  G AY  ++    +I    ++   +G  S     R ++  
Sbjct: 127 YVGAMESVGEVITMVQQLLDAGAAYVVDDPDYPDIYASITATDRFGYESNYPRQRMLELF 186

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K++P D +LW+ +   EP W++P+G GRPGWH+ECSA++++ LG  F I
Sbjct: 187 AERGGDPDRPGKRDPLDALLWRAAREGEPAWDAPFGAGRPGWHVECSAIATNRLGSSFAI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +  A    + A  ++H G ++L+G KMSKS GN + +++L E
Sbjct: 247 QGGGSDLIFPHHEFSAAHAEAALASPRMAEHYVHTGMISLDGVKMSKSLGNLVFVSKLTE 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGII 347
                        IRL + + HYR   D++ + L  AE  L  W   +T      +   +
Sbjct: 307 A------GHDPSAIRLGVYLGHYRSDRDWSDKVLWAAEHRLVYWRMATTLASDESAARAL 360

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST 376
              + S L +DLNT +AI+A+ + A    
Sbjct: 361 VQQIRSLLADDLNTPAAIKAIDEWADSCN 389


>gi|239917682|ref|YP_002957240.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281413827|ref|ZP_06245569.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|310947191|sp|C5CBT9|MSHC_MICLC RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|239838889|gb|ACS30686.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 422

 Score =  342 bits (878), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 119/394 (30%), Positives = 187/394 (47%), Gaps = 40/394 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             ++++++T   +       +      +YVCG T YD  H+G+A   + FD+L+R  R  
Sbjct: 16  PDRLRLHDTATGRTR--HPGNDGRRASLYVCGITPYDATHLGHASTYVAFDLLHRYWRAA 73

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             E  V YV+N+TD+DD ++ERA               +  + T  F  D   L  LAP 
Sbjct: 74  GLE--VAYVQNVTDVDDPLLERAEA------TGVDWRALAEEQTDLFRADMAALEVLAPD 125

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNY-----GSFSRR 168
           H   AT  +  ++  ++ ++  G AY       E   ++ FD  S  +      G  S  
Sbjct: 126 HYVGATEAVGLVVDAVETMLAAGRAYRVPGGDGEPEGDVYFDVRSAQSATDWRLGQVSAM 185

Query: 169 KIDEQKM----GTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMS 223
            +DE           P++  K++P D +LW+     EP W+    G GRPGWHIECS +S
Sbjct: 186 DLDEMAAVFPERGGDPDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIECSVIS 245

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             +L   F + GGG DL FPHHE   A +   D +   A+ + H G + L+G KMSKS G
Sbjct: 246 RAHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGL-PLAHTYAHTGMVALDGEKMSKSLG 304

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--- 340
           N   ++ L        R      +R A+L  HYR   +++ Q LT+A+  +++W      
Sbjct: 305 NLELVSRLR------ARGVEPVAVRAAILAHHYRSDWEWSEQVLTDAQARVTRWRAALDG 358

Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
             + +   +  AV +AL +DL+   A++AL   A
Sbjct: 359 PHAAAGVAVLDAVHAALSDDLDAPRALEALDAWA 392


>gi|296393640|ref|YP_003658524.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Segniliparus rotundus DSM 44985]
 gi|310947218|sp|D6ZFG9|MSHC_SEGRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296180787|gb|ADG97693.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Segniliparus rotundus DSM 44985]
          Length = 420

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 118/418 (28%), Positives = 201/418 (48%), Gaps = 40/418 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++++ +R I            MYVCG T YD  H+G+A   + FD+++RL      
Sbjct: 17  PRLRLWDSADRIIRPVTP--GRTATMYVCGITPYDATHLGHAATYLAFDLVHRLW--LDA 72

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V Y +NITD+DD ++ERA ++H           + ++  + F  D + L  L P   
Sbjct: 73  GHQVAYAQNITDVDDPLLERADRDH------RDWQELAAEQIELFRTDMSALRVLPPHEY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
              T  +  ++ +++ ++ +  AY        ++    ++  ++G  S    +E     R
Sbjct: 127 VGVTESVGLVVAMVEKLLANQSAYVVAEGEYPDVYHRIAATEDFGYVSGYGREEMAQVFR 186

Query: 179 V----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +P D +LW+ + P EP W SP+G GRPGWH+ECSA++   +G  FD+ 
Sbjct: 187 ERGGDPDRPGKADPLDALLWRAARPGEPSWPSPFGPGRPGWHVECSAIALDRIGFGFDVQ 246

Query: 235 GGGLDLIFPHHENE------IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           GGG DL+FPHHE           +  AD   + A  ++H G + L+G KMSKS GN + +
Sbjct: 247 GGGSDLVFPHHEFSAAHAQAQHGAGAADEHRRFARNYVHAGMIGLDGEKMSKSLGNLVFV 306

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----S 343
           + L E      R      IRLA+   HYR    +    L EA+  L++W   ++     +
Sbjct: 307 SALRE------RGVDPSAIRLALFAGHYRADRSWDQGLLREAQERLARWRHAASLASGPA 360

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIEV 396
              +   +   L NDL+T  A+ AL   + E+             +  A+  +LG+++
Sbjct: 361 AHDVVARMREHLANDLDTPKALAALDSWSLEAAAHGGGDQEAPALVARAADALLGVQL 418


>gi|225021443|ref|ZP_03710635.1| hypothetical protein CORMATOL_01463 [Corynebacterium matruchotii
           ATCC 33806]
 gi|224945825|gb|EEG27034.1| hypothetical protein CORMATOL_01463 [Corynebacterium matruchotii
           ATCC 33806]
          Length = 419

 Score =  341 bits (876), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 121/393 (30%), Positives = 196/393 (49%), Gaps = 33/393 (8%)

Query: 4   KIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +++Y+T +      + +    +   MYVCG T YD  H+G+A   + FD+++RLL    
Sbjct: 18  PLRLYDTAD---ETLKPVRVTHNQAGMYVCGITPYDSTHLGHAATYLAFDLIHRLL--ID 72

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYV+NITD+DD + ERA               + S     F  D   L+ + P  
Sbjct: 73  AGVQVTYVQNITDVDDPLFERA------TRDGVDWRELGSSQIDLFRSDMADLSVIPPQD 126

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSR----RKIDEQ 173
              A   + ++I ++Q ++  G AY  ++    +I    ++   +G  S     R ++  
Sbjct: 127 YVGAMESVGEVITMVQQLLDAGAAYVVDDPDYPDIYASITATDRFGYESNYPRQRMLELF 186

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
                 P++  K++P D +LW+ +   EP W++P+G GRPGWH+ECSA++++ LG  F I
Sbjct: 187 AERGGDPDRPGKRDPLDALLWRVAREGEPAWDAPFGAGRPGWHVECSAIATNRLGSSFAI 246

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            GGG DLIFPHHE   A +  A    + A  ++H G ++L+G KMSKS GN + +++L E
Sbjct: 247 QGGGSDLIFPHHEFSAAHAEAALASPRMAEHYVHTGMISLDGVKMSKSLGNLVFVSKLTE 306

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGII 347
                        IRL + + HYR   D++ + L  AE  L  W   +T      +   +
Sbjct: 307 A------GHDPSAIRLGVYLGHYRSDRDWSDKVLWAAEHRLVYWRMATTLASDESAARAL 360

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
              + S L +DLNT +AI+A+ + A        
Sbjct: 361 VQQIRSLLADDLNTPAAIKAIDEWADSCNATAT 393


>gi|119964010|ref|YP_947911.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|310947171|sp|A1R6P9|MSHC_ARTAT RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|119950869|gb|ABM09780.1| putative cysteinyl-tRNA synthetase (cysS) [Arthrobacter aurescens
           TC1]
          Length = 425

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 126/426 (29%), Positives = 191/426 (44%), Gaps = 49/426 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++Y+T   ++ + +   P    MYVCG T YD  H+G+A   + FD+L R  R    
Sbjct: 17  PQLRLYDTALGRVVDVE-RQPEQ-SMYVCGITPYDATHMGHAASYVAFDLLNRAWRDAG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V+YV+N+TDIDD ++ERA               +       F  D   L  LAP H 
Sbjct: 74  -VRVSYVQNVTDIDDPLLERA------TATGVDWRELAQSQIDLFQTDMDALNVLAPNHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNY---------GSFS 166
             A   IP ++  I+ +I  G AY       E + ++ +D  +             G  S
Sbjct: 127 IGAVEAIPDIVPAIEQLIADGVAYRVAGSEGEPDGDVYYDVETAGKRSDATDAWTLGDVS 186

Query: 167 RRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSA 221
                E           P +  K++  D +LW+ +   EP W  S  G GRPGWHIEC+ 
Sbjct: 187 GLGEKEMLELFAERGGDPTRAGKRHALDPLLWRVARDGEPSWPGSTLGDGRPGWHIECTV 246

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           ++  YL   F + GGG DL+FPHHE     +     +   A  + H G + L+G KMSKS
Sbjct: 247 IAQKYLPAPFTVQGGGSDLVFPHHEMGAGHAYSLSGV-PLARHYSHAGMVGLDGEKMSKS 305

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GN + +++L    +          IRLA+L  HYR    +T     EA+  L +W    
Sbjct: 306 KGNLVLVSKLRAAGE------EPAAIRLAILAHHYRSDWSWTDAEFAEAKDRLKQWRAAL 359

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------HDLLPIFNASAH 390
               + S   +  A+   L NDLN   AI A+   A E+ ++       D   + +A   
Sbjct: 360 DHAPAGSAAALISAMRDELANDLNAPGAIAAVDHWAAEAIRSGSDKSEQDTALVTDAIDA 419

Query: 391 ILGIEV 396
           +LG+E+
Sbjct: 420 LLGVEL 425


>gi|238064513|ref|ZP_04609222.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237886324|gb|EEP75152.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 412

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 120/412 (29%), Positives = 194/412 (47%), Gaps = 36/412 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            + ++++  R         P ++  MYVCG T YD  H+G+A  MI FD++ R+ R    
Sbjct: 18  PLTLFDSARRGT---HPSRPGDVATMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGL 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V YV+N+TDIDD ++ERA ++       +   ++  + T  F +D   L  + P H 
Sbjct: 75  --TVRYVQNVTDIDDPLLERAARD------GEDWKVLAMRETALFREDMEALRMIPPAHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM---- 175
             A   IP +   +  ++  G AY  +    ++ FD ++ P +G  S     E       
Sbjct: 127 VGAVESIPDIADKVLVLLKDGAAYRLDDGTGDVYFDIAATPEFGYESNLSRAEMLEIFPE 186

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIH 234
               PE+  K++P D +LW+ +   EP W     G GRPGWHIEC+ ++ + LG+  D+ 
Sbjct: 187 RGGDPERAGKRDPLDPLLWRGAREGEPSWPGGDLGPGRPGWHIECAVIALNLLGESIDVQ 246

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL+FPHHE   A +         A  ++H G + L G KMSKS GN + ++ L   
Sbjct: 247 GGGNDLLFPHHECSAAHAERLTGRSPFATHYVHAGMIGLNGEKMSKSRGNLVFVSRLRAD 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDP 349
           +           +RL ++  HYR    +T   LT A+  L++W + + +        +  
Sbjct: 307 R------VDPMAVRLGLMAGHYRADRTWTEDLLTVAQERLARWRRAAAAPAGPSGVELMS 360

Query: 350 AVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIF-NASAHILGIEV 396
           AV + L +DL+T  AI      A         +     +F +    +LGI +
Sbjct: 361 AVRARLADDLDTPGAIAVADDWAERVLAGTGDDRSAPSLFADTLDALLGIRL 412


>gi|284991120|ref|YP_003409674.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Geodermatophilus obscurus DSM 43160]
 gi|310947184|sp|D2S6C9|MSHC_GEOOG RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|284064365|gb|ADB75303.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Geodermatophilus obscurus DSM 43160]
          Length = 422

 Score =  341 bits (874), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 120/415 (28%), Positives = 192/415 (46%), Gaps = 41/415 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T   ++        +  RMYVCG T YD  H+G+A   + FD++ R+ R      
Sbjct: 19  LTLHDTARGEVVPTTP--DTTARMYVCGITPYDATHLGHAATYLAFDLVNRVWRDAG--H 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV+N+TDIDD ++ERA ++       +   ++  + T  F +D T L  L P     
Sbjct: 75  AVHYVQNVTDIDDPLLERAERD------GEDWVVLGMRETALFREDMTALRVLPPDDYVG 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQ----KMGT 177
           A   +P+++  ++ ++  G AY  +    ++  D +  P +GS S               
Sbjct: 129 AVESVPRIVAHVETLLDEGLAYVLDDGTGDVYHDIAQAPGFGSESGYDEATMLRFSAERG 188

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGG 236
             P++  K+N  D +LW+   P EP W  P G  GRPGWHIEC+ ++   +G  FD+ GG
Sbjct: 189 GDPDRPGKRNRLDPMLWRGRRPGEPSWPGPRGVAGRPGWHIECATIALETIGMGFDVQGG 248

Query: 237 GLDLIFPHHENEIAQSCCADRIE-----KTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           G DL+FPHHE     +              A  ++H   + L+G KMSKS GN + +++L
Sbjct: 249 GSDLVFPHHEFSAVHAEALTATVTGEKLPFARAYVHAAMIGLDGEKMSKSRGNLVFVSKL 308

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA- 350
                  G       IRLA+L  HYR    +T   L  AE  L+ W +  T       A 
Sbjct: 309 R------GEGVDPMAIRLALLAGHYRTDRAWTPDLLAGAEQRLATWRRAVTRDAGAPAAE 362

Query: 351 ----VLSALYNDLNTVSAIQALHK-----LARESTKNHDLLPIF--NASAHILGI 394
               +   L +DL++  AI  +       LA  + +  +  P    +A   +LG+
Sbjct: 363 VLQGLRERLADDLDSPGAIALVDAWAERTLAATADEQEEGAPTIVCDAVDALLGV 417


>gi|38233849|ref|NP_939616.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
 gi|61216544|sp|Q6NH81|MSHC_CORDI RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|38200110|emb|CAE49790.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae]
          Length = 414

 Score =  340 bits (873), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 119/411 (28%), Positives = 202/411 (49%), Gaps = 34/411 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T ++ I   + +D   + +YVCG T YD  H+G+A   + FD++ R L       
Sbjct: 19  LSLFDTSDQLIKPVE-VDTPEVGVYVCGITPYDSTHLGHAATYLTFDLINRQL--IDAGH 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +V+NITD+D+ + ERA      +        + S     F  D   L+ + P H   
Sbjct: 76  RVHFVQNITDVDEPLFERA------LRDGVDWRELGSSQIDLFRSDMENLSVIPPRHYVG 129

Query: 125 ATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSR--RKIDEQKMGTR 178
           A   IP++I +++ ++ +G AY    ++  +I    ++   +G  S   R++ EQ    R
Sbjct: 130 AMESIPEVIAMVETMLANGTAYIVESDSYRDIYASITATTQFGYESHYSRELMEQFFAER 189

Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
              PE+  KK+  D ++W+     EP W++P+G GRPGWH+ECSA+++H+LG  F I GG
Sbjct: 190 GGDPERVGKKDSLDALIWRAHRLGEPSWDAPFGAGRPGWHVECSAIATHHLGSHFAIQGG 249

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DLIFPHHE   A +       + A  ++H G + L+G KMSKS GN + ++ L     
Sbjct: 250 GSDLIFPHHEFSAAHAEATFGESRMAGHYVHTGMIGLDGTKMSKSLGNLVFVSRL----- 304

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------PA 350
                +    IRL +   HYR+  D++   LT A+     W   + +   +         
Sbjct: 305 -TSEGYHPSDIRLGVFAGHYRDDRDWSTDLLTAAQERRQAWITAADNARDVQQVQQTIQK 363

Query: 351 VLSALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILGIEV 396
           +   L NDLNT + +  +   A      +S +      + +    +LG+++
Sbjct: 364 IRHLLANDLNTPAVLAEVDNWANLIPLNDSARTEAGRLMASGLDALLGVKI 414


>gi|84496470|ref|ZP_00995324.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383238|gb|EAP99119.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 414

 Score =  339 bits (871), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 123/413 (29%), Positives = 200/413 (48%), Gaps = 38/413 (9%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++++T   ++ E         R+YVCG T YD  H+G+A   + FD++ R+LR    E 
Sbjct: 19  LRLHDTSSGELREVVP--GEVARLYVCGITPYDATHLGHAATYVAFDLVGRVLRDNGHE- 75

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y +N+TD+DD ++ERA+++            +       + +D T L  + P     
Sbjct: 76  -VHYTQNVTDVDDPLLERAKRD------GIDWRDLAVAEADLYREDMTALQVIPPQDYIG 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE------IIFDTSSIPNYGSFSRRKIDEQ----K 174
               +P +  L++  I  G AYE  N+      +  D S +  +G  S    ++      
Sbjct: 129 VVEALPVIADLVRRTIESGAAYELPNDEAEGPDLYVDLSHVSGFGKVSGWTREQMLTVFA 188

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDI 233
                P++  K++  D +LW+ +   EP WE      GRPGWH+EC+A++   LG   D+
Sbjct: 189 ERGGDPDRPGKRDVLDPLLWRAARDGEPSWEFEGLPAGRPGWHVECTAIALDRLGVPIDV 248

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           +GGG DLIFPHHE  +AQ+  A  ++  A +  H G + L+G KMSKS GN + +++L  
Sbjct: 249 NGGGSDLIFPHHEMTVAQAS-AIGVDDYARLHAHAGMVGLDGHKMSKSRGNLVLVSKLRA 307

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIID 348
                        IRL +L  HYR   D+T + LT A+  L  W +     T+ S     
Sbjct: 308 D------GVDPMAIRLVLLAEHYRSDWDYTPELLTVAQTRLEHWREALSVNTAPSADETV 361

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK---NHDLLP--IFNASAHILGIEV 396
            A+ +AL +DL+   A+ A+   A ++     +    P  +  A   +LGI V
Sbjct: 362 AAIRAALSDDLDAPRALAAIDVWADKTLSTGGDEQAAPGVLGRALDALLGIRV 414


>gi|193216531|ref|YP_001999773.1| cysteinyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193001854|gb|ACF07069.1| cysteinyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 401

 Score =  339 bits (871), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 150/421 (35%), Positives = 213/421 (50%), Gaps = 33/421 (7%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y+CGPTVY++ HIGN RP++ FD++ R  RY   E  + Y+ NITDIDDKII ++ +E  
Sbjct: 6   YLCGPTVYNYPHIGNMRPIVTFDLMIRAQRYLGDE--IFYLHNITDIDDKIINKSLEE-- 61

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
               N +   ITS   + ++   T      PT   R T+ +  M   IQ +I    AY+ 
Sbjct: 62  ----NKSEKEITSFYEKYYLNLFTLFNLEMPTKVIRVTDSLDDMYNYIQRLIDIKAAYQV 117

Query: 149 NNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
              + FD     N YGS S +KI          +K+ K NP DF LWK ++     + SP
Sbjct: 118 GKNVFFDIEKYQNTYGSISNQKIANLNY---DEDKFQKNNPFDFALWKETSKG-IKFASP 173

Query: 208 WGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           +G GRPGWH ECS     Y  GK  DIH GG+DLIFPHHENE  Q       +  A  W+
Sbjct: 174 FGEGRPGWHTECSCFIDKYFEGKTIDIHAGGIDLIFPHHENENIQHFALHH-QPIAKNWM 232

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G LN + +KMSKS GN I  ++ LE        + A   +L ML T+Y +PI+ T + 
Sbjct: 233 HFGTLNYKNQKMSKSIGNLIYPHDFLE-------KYEADTYKLLMLTTNYAKPINLTDEM 285

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHD 380
           L   +  ++K+ +   SK +++    S     +N + A+ A    A+ +      TK+ +
Sbjct: 286 LVLNQNQINKF-KVIASKCLLEKMHDSIDQEKVNHIIALIASLNFAKANEELIKLTKSKE 344

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
               F A   ILG        +K I+   E+L Q+    +  K F  AD +R +L  KG 
Sbjct: 345 KYTTFIAIMKILGFNF----ASKTITKEDEELYQQWKNEVANKNFEQADTLRAKLIKKGL 400

Query: 441 I 441
           I
Sbjct: 401 I 401


>gi|256394535|ref|YP_003116099.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
 gi|310947176|sp|C7Q9B2|MSHC_CATAD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256360761|gb|ACU74258.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Catenulispora acidiphila DSM 44928]
          Length = 427

 Score =  339 bits (870), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 112/385 (29%), Positives = 182/385 (47%), Gaps = 31/385 (8%)

Query: 5   IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +++++T  + +    A  P    R+YVCG T YD  H+G+A   + FD++ R        
Sbjct: 19  VRLHDTAAQGLVPTPAAAPGEAARIYVCGITPYDATHMGHANTYLTFDLIQRAW--LDAG 76

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V+YV+N+TD+DD ++ERA               +    T  F +D T L  L P H  
Sbjct: 77  HPVSYVQNVTDVDDPLLERAAA------TGRDWEALAESETALFREDMTALRILPPQHYV 130

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRV 179
            A   IP ++ L+  ++  G AY+ + ++ F   + P +G+ +     E           
Sbjct: 131 GAVESIPLVVDLVVKLLERGAAYDVDGDVYFSVHADPAFGAVAHLDAPEMLTTFGERGGD 190

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWE-------SPWGRGRPGWHIECSAMSSHYLGKVFD 232
           P +  KK+P D +LW+     EP WE       +    GRPGWHIEC+A++  +LG   D
Sbjct: 191 PGRPGKKDPLDCLLWQAEREGEPSWEPGEQARAAGLKPGRPGWHIECAAIALEHLGMGID 250

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE   +++         A+ ++H+G + L+G KMSKS GN + +++L 
Sbjct: 251 LQGGGSDLAFPHHEMGASEAQVVTGQRPYAHSYVHSGMVGLDGEKMSKSKGNLVLVSKLR 310

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
                         IRLA+L  HYR   ++T   L  A   L++W    +    +     
Sbjct: 311 HA------GVDPMAIRLALLAHHYRTDWEWTDADLVSAVARLARWRAAVSRPDGVPADDV 364

Query: 350 --AVLSALYNDLNTVSAIQALHKLA 372
             AV + + +DL+   A+  +    
Sbjct: 365 LDAVRARIADDLDAPGALAVIDAWV 389


>gi|297626576|ref|YP_003688339.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922341|emb|CBL56913.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 418

 Score =  339 bits (870), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 125/430 (29%), Positives = 200/430 (46%), Gaps = 45/430 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           + +++ +  T  R+       D  +  +YVCG T YD  H+G+A   ++FDVL R+ R  
Sbjct: 21  VPERLVMVTTNNRRAVPIGPAD-GDAGLYVCGITPYDATHMGHAFTYVMFDVLDRVWRDL 79

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V Y +N+TD+DD ++ERAR              + S  TQ F  D   L  L P 
Sbjct: 80  GLN--VRYAQNVTDVDDPLLERARA------TGVDWRELASDQTQLFRDDMESLRVLPPR 131

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQK-- 174
               AT+ I +++ LI+ +   G  Y+ ++    +  F+    P +G+ S     +    
Sbjct: 132 WYVPATSIIDEVVELIERLRQQGTIYQVDDPQYPDWYFEVGKAPGFGTESHLSRQDMISE 191

Query: 175 --MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                  PE+  K++  D ++W+   P EP W+S  GRGRPGWHIEC+A + + LG+ F 
Sbjct: 192 FAEHGGDPERPGKRDALDCLVWRMERPGEPAWDSRLGRGRPGWHIECTATALNRLGEDFA 251

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE   A++  A   +  A  +IH G + L+G KMSKS GN + +++L 
Sbjct: 252 VQGGGRDLAFPHHEMCAAEAIVATG-KPFAEAYIHVGMVGLDGEKMSKSLGNLVLVSKLR 310

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---- 348
                  +      IRLA+L   Y     +T   L +A+  L  W   + +    D    
Sbjct: 311 ------AQGVDPMAIRLALLAHGYASDWSWTQAGLDDAQRRLDAWRAATRASSGTDAVPV 364

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              +  AL   L+T +A+  + +                 S+ +L  +       + IS 
Sbjct: 365 IADIRRALREGLDTPTALAVVDEW----------------SSAVLAGDGDDLAAPQQISQ 408

Query: 408 AIEKLVQERL 417
           A++ L+  RL
Sbjct: 409 AVDALLGIRL 418


>gi|296129854|ref|YP_003637104.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Cellulomonas flavigena DSM 20109]
 gi|310947177|sp|D5UFA8|MSHC_CELFN RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|296021669|gb|ADG74905.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Cellulomonas flavigena DSM 20109]
          Length = 415

 Score =  338 bits (868), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 115/430 (26%), Positives = 199/430 (46%), Gaps = 46/430 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +++ +T   ++    A    + R+YVCG T YD  H+G+A   + FDVL R       
Sbjct: 17  EPVRVLDTATGRLV--VAATGPHARLYVCGITPYDATHLGHASTYVAFDVLVRAWLDEG- 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K VTY  N+TD+DD ++ERA               + ++ T  +  D T L  + P   
Sbjct: 74  -KTVTYASNVTDVDDPLLERA------TATGVDWRDLAAQQTALYASDMTTLGVVPPDVY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
                 +PQ++  +  ++    AY     +  +++  D S+ P +GS +  +       +
Sbjct: 127 RGVVESVPQVVAAVDALLSRDAAYRLPAPDGGDDVYADLSADPGFGSVAGLEHAAMLALS 186

Query: 178 ----RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFD 232
                 P++  K++P D +LW+   P EP W++P  GRGRPGWH+EC+ ++S  LG  FD
Sbjct: 187 AERGGDPDRPGKRSPLDPLLWRAERPGEPAWDAPGLGRGRPGWHVECAVIASDGLGVPFD 246

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE+  +         + A   +H G +   G KMSKS GN + +++L+
Sbjct: 247 VQGGGSDLAFPHHESSASHLRVLTGTPQPAAAHVHTGMVGYRGHKMSKSLGNLVLVSQLV 306

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-- 350
                         +RLA+L   YR   ++T   L  A+  +++W +  +  G       
Sbjct: 307 AD------GVEPMAVRLAVLAHRYRSDWEWTDDVLATAQQRVARWRRALSGNGGPAAQPV 360

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              V +A+ +DL+T  A+  +   A               +A + G    +E     ++ 
Sbjct: 361 LDGVRAAVADDLDTPRALAVVDAWA---------------TAALAGEVPFEEGAPGVVAR 405

Query: 408 AIEKLVQERL 417
            ++ L+  R+
Sbjct: 406 TVDALLGVRM 415


>gi|326332343|ref|ZP_08198622.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardioidaceae bacterium Broad-1]
 gi|325949832|gb|EGD41893.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Nocardioidaceae bacterium Broad-1]
          Length = 410

 Score =  338 bits (868), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 119/398 (29%), Positives = 194/398 (48%), Gaps = 29/398 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            ++++Y+    +       +      +YVCG T YD  H+G+A   + FD+L+R      
Sbjct: 17  PEVQVYD---HQRDAVVPTEGQGRRSLYVCGITPYDATHMGHANTYVAFDLLHRAWLNAG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E  V Y +N+TD+DD ++ERA +      +      +  + T+ F +D   L  + P H
Sbjct: 74  YE--VGYTQNVTDVDDPLLERADK------VGIEWEALAERETELFRQDMEALRVVPPQH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM--GTR- 178
              A   IP ++ LI  +   G  Y+ + ++    +    +G  SR   +E     G R 
Sbjct: 126 YIGAVESIPLVLSLIGELEEAGAIYKVDEDVYASVAVDDAFGEESRMSREEMLELFGERG 185

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
             PE+  KK+P D +LW+   P EP W SP+G GRPGWHIEC+A++  +LG  F +  GG
Sbjct: 186 GDPERPGKKDPLDPLLWRAERPGEPAWPSPYGPGRPGWHIECTAIALEHLGAGFTVQAGG 245

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL+FPHH  E++ S      ++ A I+ H G +  +G KMSKS GN + ++ L  ++  
Sbjct: 246 SDLVFPHH--EMSGSHARSAGKEFAEIYTHGGMVAYDGHKMSKSRGNLVFVSALRNSE-- 301

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVL 352
                    IRL +L  HYR+  ++T  +L +A   +++W +            +   VL
Sbjct: 302 ----IDPMAIRLVLLGHHYRDDWEWTDAKLFDAVDQIAEWRKAVALGRGAPAAPVVETVL 357

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
            AL +DL+   A+QA+      +     L    +A A 
Sbjct: 358 GALADDLDAPRAVQAVDAWVAATLGEGGLAETSDALAG 395


>gi|67468752|ref|XP_650386.1| cysteinyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56467004|gb|EAL45000.1| cysteinyl-tRNA synthetase, putative [Entamoeba histolytica
           HM-1:IMSS]
          Length = 701

 Score =  338 bits (867), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 136/454 (29%), Positives = 200/454 (44%), Gaps = 60/454 (13%)

Query: 50  FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE-RARQEHPSIPINDAISIITSKNTQQFV 108
           ++ ++  L  + G+        +TD+  K ++ R ++    I + +A  I   K  + F 
Sbjct: 139 YEKVFPTLDSFNGQNTAEVFARMTDVIGKYLDVRQKETVDPIEMKEAARIHARKYEELFF 198

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
            D   L    P    R T  IP++I  IQ II +G+AYE+N  + FDT+S    G    R
Sbjct: 199 ADCDALGIRRPDVISRVTEFIPEVIAFIQKIIDNGYAYESNGSVYFDTASFRKAGMTYGR 258

Query: 169 KIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
            ++   +G    P    K N  DF LWK+S   EP WES WG GRPGWHIECSAM+S+  
Sbjct: 259 -LEPWSVGDVDAPADGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVF 317

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENE+AQS      +      ++H G L++ G KMSKS  NFI
Sbjct: 318 GDTLDIHSGGEDLKFPHHENELAQSEAYFNKKESWVRYFLHTGHLHINGLKMSKSLKNFI 377

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKWPQTSTS 343
           TI + LE        + A  +R+  LM  +   I+F+   L EA   E  + ++  T  S
Sbjct: 378 TIKQALE-------KYSARQLRILFLMQSWDAVINFSDSALDEAISKEKTIVEFFATMHS 430

Query: 344 K----------GIIDPAVL-----------SALYNDLNTVSAIQALHKLARESTK----- 377
                         D   L           +AL N+ +T +A+  L  L R+  +     
Sbjct: 431 ALNAPLKGSPLDAKDRDFLTTLETRRKGIHTALCNNFDTATAMNHLFALIRKCNEYLSST 490

Query: 378 -----NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL----VQERLILLKMKK---F 425
                    L        + GIE  +   + + +  ++       + R   +K K     
Sbjct: 491 SSTLLLRSALYYIQKMLKVFGIEEKQVSSSSDNAPLLDTWCLFRTEVRKEAIKSKNTNIL 550

Query: 426 SSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
           +  D +R + L   G  +ED          T WK
Sbjct: 551 NLCDKVRDEDLPKVGVRVED-------DGKTAWK 577



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 4/110 (3%)

Query: 1   MKKKIKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           M + +K++NTL+R  +  F    P  IR Y CGPTVYD +H+G+AR  +  D+  R+L  
Sbjct: 1   MTETLKVHNTLKRDGLDNFVCNGP--IRWYCCGPTVYDDSHLGHARTYLSTDIFRRILED 58

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
           Y+G   V    NITD+DDKII +AR+         A   +T+   +   +
Sbjct: 59  YFG-YQVIQCMNITDVDDKIILKARKNLLISKYCTATPKVTADTIKMMKE 107


>gi|317124881|ref|YP_004098993.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
 gi|315588969|gb|ADU48266.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
          Length = 418

 Score =  337 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 127/419 (30%), Positives = 198/419 (47%), Gaps = 40/419 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++++ +T+  ++    A    +  +YVCG T YD  H+G+A   + FD+L R LR   
Sbjct: 16  SPEVRVRDTVSGELVP--AAVDGSASVYVCGITPYDATHLGHAATYLTFDLLVRSLRDAG 73

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV+NITDIDD ++ERA ++        +   + ++    F +D T LA L P  
Sbjct: 74  --VSVRYVQNITDIDDPLLERAERD------GVSWEDLATREIGLFREDMTALAVLPPDE 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY---------EANNEIIFDTSSIPNYGSFSRRKIDE 172
              A   IP  I  I+ ++  G AY            +++ FD S  P +GS SR     
Sbjct: 126 YLGAVESIPTFIAPIEQLLATGDAYLVPAPDASRPGAHDVYFDISRDPKFGSVSRLDEAG 185

Query: 173 Q----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYL 227
                      P++  K+N  D +LW+     EP W+    G GRPGWHIEC+ ++  +L
Sbjct: 186 MLEVFAERGGDPDREGKRNRLDALLWRAHRAGEPEWDGGQLGPGRPGWHIECACIACTHL 245

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   D+ GGG DL+FPHHE   A +         A  ++H G + L+G KMSKS GN + 
Sbjct: 246 GLPIDVQGGGTDLVFPHHEMSAAHARAFSGRPAFARTYVHQGMVGLDGEKMSKSKGNLVF 305

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           ++EL               IRLA+L  H+     +    LT AE  L+ W +  +  G  
Sbjct: 306 VSELRRA------GVDPMAIRLALLARHHAADWIWQDHDLTAAEERLATWRRALSGNGGP 359

Query: 348 D-----PAVLSALYNDLNTVSAIQALHKLARES-TKNHDLLP----IFNASAHILGIEV 396
                   V +AL +DL++  A+ ++ + A E+ T+  D L     +      +LG+ +
Sbjct: 360 AADGTVEEVRAALADDLDSPRALASVDRWAAEALTRGGDDLGAPGLLARTLDALLGVRL 418


>gi|269114835|ref|YP_003302598.1| Cysteinyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322460|emb|CAX37195.1| Cysteinyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 401

 Score =  337 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/423 (33%), Positives = 217/423 (51%), Gaps = 38/423 (8%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           R Y+CGPTVY++ HIGN RP++ FD++ R  R     + V ++ NITDIDDKII +A+QE
Sbjct: 3   RYYLCGPTVYNYPHIGNLRPIVSFDLMIRAQRQLG--EDVYFLHNITDIDDKIIAKAKQE 60

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                 N     I+S     ++      +   P    R T+ +  M   IQ++I  G AY
Sbjct: 61  ------NKTEKEISSFYEAYYLNLFKLFSIEMPNKIVRVTDSLNDMYEYIQSLIEKGAAY 114

Query: 147 EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           + N  + FD     + YG  S +K+      +       K++P DF LWK +T     ++
Sbjct: 115 QVNGNVYFDVLKFKDVYGKISNQKLANLISDSSNEVD--KRSPYDFALWKDTTEG-IKFQ 171

Query: 206 SPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           SP+G GRPGWH ECS   + Y  GK  DIHGGG+DLIFPHHENE  Q    +R +  A  
Sbjct: 172 SPFGLGRPGWHTECSCFINKYFEGKQLDIHGGGIDLIFPHHENENIQHFAINRQD-IAKD 230

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           WIH G LN + +KMSKS GN I   E L       +++ A   +L ML T Y +PI+ T 
Sbjct: 231 WIHFGTLNYKNQKMSKSIGNIIYAEEFL-------KNYSADTYKLLMLSTSYSKPINITD 283

Query: 325 QRLTEAEILLSKWP------QTSTSKGIIDPAVLSA-LYN--DLNTVSAIQALHKLARES 375
           + L   +  ++         Q    K  +D  ++ + L N  +L+   A + L++  +  
Sbjct: 284 ELLASLQKQINNIEAHFNKSQLEDIKYTLDKQIIDSILKNVSNLDFSLAFKQLNEQLKSP 343

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
               +   +F     +LG ++ +  ++ +     ++L ++  IL + K++  AD IR  L
Sbjct: 344 LNYGNAFFVFK----VLGFKLVENKVSNDD----KELYRKWNILKEQKQYDKADEIRNIL 395

Query: 436 ESK 438
           ++K
Sbjct: 396 KTK 398


>gi|90077312|dbj|BAE88336.1| unnamed protein product [Macaca fascicularis]
          Length = 451

 Score =  337 bits (866), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 133/463 (28%), Positives = 200/463 (43%), Gaps = 97/463 (20%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
            V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R T 
Sbjct: 1   MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTE 54

Query: 128 HIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHK 185
           +IPQ+I  I+ II  GHAY  A   + FD  S  + YG                P    K
Sbjct: 55  NIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLVGVVPGPVG----EPADSDK 110

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL FPHH
Sbjct: 111 RHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHH 170

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWP 303
           ENEIAQ     + E+  N ++H+G L+++G   KMSKS  N+ITI + L+T       + 
Sbjct: 171 ENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLKT-------FS 223

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKWPQTSTSKGIIDP---- 349
             V R   L + YR  ID++   +  A+  L            + +   + G +      
Sbjct: 224 PDVFRFFCLRSSYRSAIDYSDSAMLHAQQQLLALGSFLEDARAYMKGQLACGSVREVMLW 283

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNH-----------------DLLPI 384
                   AV  AL +D +T   + A+  LA    +                    ++  
Sbjct: 284 ERLASTRSAVKEALADDFDTPRVVDAILGLAHHGNRQLRAASKEPGVPRSPAVFGAIISF 343

Query: 385 FNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA---------- 428
           F      +GI +  +           +   +E+LV+ R  + +   F+ A          
Sbjct: 344 FEQFFETVGISLGNQQCVSGDGSEATLRGVVEELVRFRQKVRQ---FALAKAEATVEARR 400

Query: 429 -------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                        D +R+ L + G  ++D  +  +      W+
Sbjct: 401 QQLLERQPLLEACDTLRQDLTAHGISIKDRNSTTS-----TWE 438


>gi|317506755|ref|ZP_07964536.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Segniliparus rugosus ATCC BAA-974]
 gi|316254954|gb|EFV14243.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Segniliparus rugosus ATCC BAA-974]
          Length = 354

 Score =  337 bits (865), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 106/354 (29%), Positives = 173/354 (48%), Gaps = 33/354 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++++ +R +            MYVCG T YD  H+G+A   + FD++ RL      
Sbjct: 17  PQLRLWDSADRLLRPVAP--GRKAGMYVCGITPYDATHLGHAATYLAFDLVCRLWLDAGH 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V Y +NITD+DD ++ERA ++      +     + ++  + F  D   L  L P   
Sbjct: 75  E--VHYTQNITDVDDPLLERAERD------DRDWRALAAEQIELFRTDMAALRVLPPQDY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQ----K 174
              T  I  ++ +++ ++ +  AY        ++     +  ++G  S    DE     +
Sbjct: 127 VGVTESIDLVVAMVEKLLANQSAYVVAEGEYPDVYHRVGATEDFGYVSGYDRDEMTRVFR 186

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K +P D +LW+ + P EP W SP+G GRPGWH+ECSA++   +G  FD+ 
Sbjct: 187 ERGGDPDRPGKADPLDALLWRAARPGEPSWPSPFGPGRPGWHVECSAIALDRIGFGFDVQ 246

Query: 235 GGGLDLIFPHHENEIAQSCC---------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           GGG DL+FPHHE   A +           AD   + A  ++H G + L+G KMSKS GN 
Sbjct: 247 GGGADLVFPHHEFSAAHAQAQVGGCSVPGADGRGRFARNYVHAGMIGLDGEKMSKSLGNL 306

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           + +++L               IRLA+   HYR    +    L +A+  LS+W Q
Sbjct: 307 VFVSKLRAA------GVDPSAIRLALFAGHYRADRSWDQNLLAQAQARLSRWRQ 354


>gi|119716853|ref|YP_923818.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
 gi|310947208|sp|A1SJZ6|MSHC_NOCSJ RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|119537514|gb|ABL82131.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
          Length = 397

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 110/350 (31%), Positives = 173/350 (49%), Gaps = 20/350 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + +++T   +            R+YVCG T YD  H+G+A   + FD+L R  R      
Sbjct: 1   MALHDTPSARKVTTTP--DGPARLYVCGITPYDATHLGHASTYVAFDLLNRAWRNAG--H 56

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYV+N+TD+DD ++ERA + H           +  + T+ F +D   L  + P H   
Sbjct: 57  DVTYVQNVTDVDDPLLERAAKVHVDWV------ELAERETELFRQDMAALRVIPPDHYVG 110

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVP 180
           A   IP +I LI  +   G  Y   +++ F  ++ P +G+ S    +            P
Sbjct: 111 AVESIPLVIELIGRLETAGAIYRVEDDLYFSVTADPAFGAESGWDRERMLEIYPERGGDP 170

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           ++  KK+P D ++W+     EP WESPWG GRPGWH+EC+A++  +LG  FD+ GGG DL
Sbjct: 171 DRPGKKDPLDCVVWRGRREGEPSWESPWGPGRPGWHVECTAIAQRHLGGAFDVQGGGSDL 230

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           +FPHHE     +  A      A ++ H G +  +G KMSKS GN + ++ L  +      
Sbjct: 231 VFPHHEMCAGHAQVAVPGTPFAQVYSHGGMVGYDGEKMSKSRGNLVFVSALRNSD----- 285

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                 IRLA+L  H+R   ++T  +L  A   +++W +  +       A
Sbjct: 286 -VDPMAIRLALLRHHFRSDWEWTDDQLWVAVDDIARWRKALSLGAGAPAA 334


>gi|153827601|ref|ZP_01980268.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149737926|gb|EDM52831.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 222

 Score =  337 bits (864), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 102/229 (44%), Positives = 143/229 (62%), Gaps = 9/229 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R+  EF+ I    + MYVCG T+YD  HIG+ R  + FDV+ R LRY   + 
Sbjct: 2   LKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +T+VRNITDIDDKII+RA +        +    +T +  Q+   D   L    P  +PR
Sbjct: 61  -LTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT +I ++I L++ +I  G AY A+  +++F+ S    YG  S++ +++ + G RV  + 
Sbjct: 114 ATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLEQLQAGARVDIEA 173

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
            K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S  LG  FD
Sbjct: 174 AKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFD 222


>gi|25028195|ref|NP_738249.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259507253|ref|ZP_05750153.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium efficiens YS-314]
 gi|61216662|sp|Q8FTD0|MSHC_COREF RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|23493479|dbj|BAC18449.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
 gi|259165196|gb|EEW49750.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Corynebacterium efficiens YS-314]
          Length = 430

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 122/376 (32%), Positives = 186/376 (49%), Gaps = 31/376 (8%)

Query: 4   KIKIYNTLERKITEF-QAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            + +Y+T ++++         S   + MYVCG T YD  H+G+A   + FD++YR+L   
Sbjct: 18  PLALYDTADQQVKPVEVPPSGSGTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRVL--L 75

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V YV+NITD+DD + ERA ++            + +     F KD   LA + P 
Sbjct: 76  DNDHQVHYVQNITDVDDPLFERAERD------GVDWRELGTSQIDLFRKDMETLAVIPPK 129

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSFSRRKIDEQKM- 175
               A   I ++I ++  ++  G AY  ++    D     ++  N+G  S          
Sbjct: 130 DYIGAIESIDEVIEMVSTLLEEGAAYVVDDPEYPDVYASINATENFGYESNYDAATMAEL 189

Query: 176 ---GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                  P++  K+NP D +LW+ +   EP WESP+G GRPGWHIECSA++++ LG  FD
Sbjct: 190 FAERGGDPDRPGKRNPMDALLWRAAREGEPSWESPFGPGRPGWHIECSAIATNRLGHSFD 249

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           I GGG DL+FPHHE   A +  A  +E+ A  ++H G ++ +G KMSKS GN   ++ L 
Sbjct: 250 IQGGGSDLMFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVHRLT 309

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                         IRL +   HYR   D++ + L  AE  L+ W    T    +  AV 
Sbjct: 310 AA------GHEPGAIRLGVYAHHYRGDRDWSDEILAAAEARLALWRSAITVATDVQAAVD 363

Query: 353 S------ALYNDLNTV 362
           +       L NDL+T 
Sbjct: 364 AVAQLRTHLSNDLDTP 379


>gi|170694947|ref|ZP_02886096.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
 gi|170140045|gb|EDT08224.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
          Length = 255

 Score =  336 bits (863), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 108/244 (44%), Positives = 150/244 (61%), Gaps = 12/244 (4%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + ++IYNTL R    F  +    +RMYVCG TVYD+ H+G+AR M+VFD++ R LR    
Sbjct: 2   ESLRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTLGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYVRNITDIDDKII RA      +   + I  +T +      +D   L    P  +
Sbjct: 62  Q--VTYVRNITDIDDKIIRRA------VENGETIKSLTDRFINALHEDADALGIARPDIE 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           PRAT+ IPQM+ +I+ +  +G+AY+A + ++ +       YG  S + +++ + G RV  
Sbjct: 114 PRATDFIPQMLGMIETLEANGYAYQASDGDVNYAVRKFAGYGKLSGKSLEDLRAGERVAA 173

Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
              K++P DF+LWK+S   EP   GW+S +GRGRPGWHIECSAM    LG+ FDIHGGG 
Sbjct: 174 NDAKEDPLDFVLWKQSKEGEPADTGWDSKYGRGRPGWHIECSAMGCALLGERFDIHGGGQ 233

Query: 239 DLIF 242
           DL F
Sbjct: 234 DLQF 237


>gi|319442059|ref|ZP_07991215.1| cysteinyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
          Length = 430

 Score =  335 bits (860), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 116/431 (26%), Positives = 196/431 (45%), Gaps = 35/431 (8%)

Query: 4   KIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            + +Y+T +  +   +       + +YVCG T YD  H+G+A   + FD+++R L     
Sbjct: 18  PLSLYDTADDVVRPVRTDWASGEVGIYVCGITPYDSTHLGHAATYVTFDLVHRAL--LDN 75

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V +V NITD+DD + ERA ++            + +     F  D   L+ + P   
Sbjct: 76  GHRVHFVENITDVDDPLFERAERD------GVDWRDLGTSQIDLFRSDMEALSVIPPREY 129

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE----IIFDTSSIPNYGSFSRRKIDEQKM--- 175
             A   + ++I L+  ++  G AY  + +    I  D +    +G  SR   DE      
Sbjct: 130 IGAMESVDEVIDLVSRLLEVGAAYRLDGDEFPDIYVDHTFTEQFGYESRYTADEMAEFFA 189

Query: 176 -GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
                P++  K+ P D ++W+     EP W++P+G GRPGWH+ECSA++++ LG  F + 
Sbjct: 190 ERGGDPDRAGKRYPLDALVWRARRDGEPSWDAPFGAGRPGWHVECSAIATNRLGASFAVQ 249

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           GGG DL FPHHE   A +  A   ++ A+ ++H G + L+G KMSKS GN + +++L   
Sbjct: 250 GGGSDLRFPHHEFSAAHAEAAHGCDRMADHYVHTGMIGLDGVKMSKSLGNLVFVSKL--- 306

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------- 346
                    A  +RL +   HYR   D++   L  AE  L++W   + +           
Sbjct: 307 ---TADGHDASAVRLGLYEQHYRADRDWSDAVLARAEDRLARWRAAAQTAASRPASAAAQ 363

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
           +   V +AL +DL+T   +  +       +      P    +     +    E     + 
Sbjct: 364 LVADVRAALSDDLDTPRVLTLIDSWCARISDTAASAPSDATAT----VPAEGEDAGTVLR 419

Query: 407 IAIEKLVQERL 417
            A + L+  RL
Sbjct: 420 TACDALLGVRL 430


>gi|12045107|ref|NP_072918.1| cysteinyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351147|sp|P47495|SYC_MYCGE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|3844851|gb|AAC71473.1| cysteinyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078699|gb|ABY79317.1| cysteinyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 428

 Score =  334 bits (857), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 145/444 (32%), Positives = 209/444 (47%), Gaps = 53/444 (11%)

Query: 19  QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
             +    I +Y+CGPTVY+  H+GN RP+IVFDVL R+L+    +  V +V+NITDIDDK
Sbjct: 11  TTLVQKTINIYLCGPTVYNDLHLGNTRPLIVFDVLNRVLKK--AKYTVNFVQNITDIDDK 68

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
           II+ A+Q+        + S++T +    +     +L  L P    + T  I ++   I  
Sbjct: 69  IIKIAQQQEV------SESVVTKQQITAYKSLLKKLNIL-PIKHIQITEKIDKIPDYIDQ 121

Query: 139 IILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
           ++   HAY +  N + F  +S+  YG  + R      M         KKN  DF+LWK +
Sbjct: 122 LVNQNHAYVSTQNNVYFAVNSLKQYGYLANR------MVHLEETDTDKKNKLDFVLWKIT 175

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
           T     W S WG GRPGWH+EC+ +  +       IHGGG+DL FPHHENE A       
Sbjct: 176 TAG-IKWNSKWGLGRPGWHVECAFLIDYCFKNELTIHGGGVDLKFPHHENENALHMALYN 234

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            +     W+H G L +E +KMSKS  NF+   + L    F        V+R      HY 
Sbjct: 235 -QPITKHWMHIGHLMIENQKMSKSLQNFLLAVDFLNFHDF-------RVLRWIFYQKHYL 286

Query: 318 EPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPA----VLSALYNDLNTVS 363
            PID     + +A   + +          W   S    +I P     V SAL ++LN  +
Sbjct: 287 HPIDLNQSLIEKANNDIQRIAKTLNVARTWLVYSEQSELISPKQYDPVFSALLDNLNFAN 346

Query: 364 AIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
           A+ A+ KL ++   +          + L     S  +LGI     H   N+     +L++
Sbjct: 347 AVAAIWKLIKKINTSIKTKDFSVLREQLSFLEWSIDLLGISFKSIHTKLNV-----RLIK 401

Query: 415 ERLILLKMKKFSSADYIRKQLESK 438
           E  IL K K    AD IRK+L  K
Sbjct: 402 EWSILHKQKAMDKADQIRKKLIKK 425


>gi|321309540|ref|YP_004191869.1| cysteinyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801384|emb|CBY92030.1| cysteinyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 424

 Score =  334 bits (856), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 138/462 (29%), Positives = 209/462 (45%), Gaps = 61/462 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+Y++LE+ +      DP   ++Y+CGPTVYD+ HIGN  P+I+FD L R L Y   
Sbjct: 1   MSLKLYDSLEQTLKTL-PKDP---KIYLCGPTVYDYVHIGNVAPLIIFDFLIRYLEYK-- 54

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +   Y+ NITDIDDKI+ +A++             I S+ T  ++     L  + PT  
Sbjct: 55  RENYLYIHNITDIDDKIVNKAKELSLKE------EEIASEYTDHYLWVMNALNVIKPTLM 108

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           P+ ++HI  +   + +++  G A+    +++ +   I NYG  S++ ++  K        
Sbjct: 109 PKVSDHIEDIQRDVSSLLESGFAHFEGKDVVMNIGKIKNYGCLSKQNLNMLKSNEN---- 164

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
                   F LWK        W+SPWG GRPGWH EC +  + Y     D+HGGG+DL F
Sbjct: 165 --------FCLWK-YMENGKTWKSPWGDGRPGWHSECFSFINRYSRGGVDLHGGGIDLKF 215

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHENE A S      +  + IW++ G L  +  K+SKS      + +LLE        +
Sbjct: 216 PHHENENAHSEALY-SKSLSKIWMYIGHLQTQDGKISKSTNKKFLVKDLLE-------KY 267

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTE--------------AEILLSKWPQTSTSKGIID 348
            A  +R   L + Y  P+     R+ E              A+  L        S G +D
Sbjct: 268 SANSLRYLFLTSKYSLPLLVDESRIEEVGKEFDNYLLTINQAKTYLYLNGGEINSAGDLD 327

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---------AHILGIEVCKE 399
              LS   NDLN    +  L KL +E         I   S            LG ++  E
Sbjct: 328 SEFLSIFENDLNLPEVLTWLQKLKKEVLTGIKEKKIEVVSKGGSQLIRHLEFLGFKIEDE 387

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           H  +N+      L+ E    L  K +S AD IR+ L+ +  +
Sbjct: 388 HTVENV-----ALIDEWKNSLANKDYSKADEIRELLKRRRIL 424


>gi|184201038|ref|YP_001855245.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|310947188|sp|B2GIP6|MSHC_KOCRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|183581268|dbj|BAG29739.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase MshC [Kocuria rhizophila DC2201]
          Length = 438

 Score =  332 bits (853), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 116/404 (28%), Positives = 184/404 (45%), Gaps = 56/404 (13%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++++T   ++    A D     +YVCG T YD  H+G+A   + FD+L+RL R       
Sbjct: 20  RVHDTSTGQLEPLAARD-GRASLYVCGITPYDATHMGHAATYVAFDLLHRLWRDAG--WS 76

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V YV+N+TD+DD ++ERA               +    T+ F  D + L  LAP H   A
Sbjct: 77  VDYVQNVTDVDDPLLERADA------TGVDWRELAESQTELFRTDMSALNVLAPQHYVGA 130

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPNYGSFSRRKIDEQ 173
           T  + +++  ++ ++  G AY A              ++ FD  +    G+      D  
Sbjct: 131 TEVVDRIVPAVERLLERGLAYRAPAGTGQGGEPAPAGDVYFDVDA---AGALRAEDPDAW 187

Query: 174 KMGT-------------------RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRP 213
            +G+                     P++  K++P D +LW+     EP W+    G GRP
Sbjct: 188 VVGSTCRLAGERDRMMPLFADHGGDPDRTGKRDPMDPLLWRAHRAGEPSWDGASLGPGRP 247

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS ++   L + F + GGG DL FPHH+     +      +  A  ++H   + L
Sbjct: 248 GWHIECSVIALDLLPRPFTVQGGGSDLAFPHHDMGAGHAYALSG-QPMAEHYVHTAMVGL 306

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           +G KMSKS GN + ++ L        +     VIRLA+L  HYR    +T + L +A   
Sbjct: 307 DGEKMSKSRGNLVLVSTLR------AQGMDPAVIRLAILANHYRTDWFWTDELLEQARRR 360

Query: 334 LSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
           L  W + +          +  AV +AL  DLN+ +A+ A+   A
Sbjct: 361 LGTWREAAAKQETAGADAMLEAVRAALGEDLNSPAALIAVDAWA 404


>gi|116670715|ref|YP_831648.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|310947173|sp|A0JWX8|MSHC_ARTS2 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|116610824|gb|ABK03548.1| Cysteine--tRNA ligase [Arthrobacter sp. FB24]
          Length = 426

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 123/428 (28%), Positives = 192/428 (44%), Gaps = 52/428 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++I++T       +  +D      +YVCG T YD  H+G+A   + FD+L R  R   
Sbjct: 17  PAVRIFDTAVG---AYSTLDATGEQSLYVCGITPYDATHMGHAASYVAFDLLNRAWRD-- 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V YV+N+TD+DD ++ERA               + +   + F  D   L  LAP H
Sbjct: 72  GGQRVAYVQNVTDVDDPLLERA------TATGVDWRDLAASQIELFQTDMAALNVLAPDH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNY----------GS 164
              A   IP+++  I+ ++  G AY       E + ++ +D  +   +          GS
Sbjct: 126 YVGAVESIPEIVPAIERLLHLGLAYRVTGTPGEPDGDVYYDVEAASKHSAEAKDAWTLGS 185

Query: 165 FSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIEC 219
            S     E           P +  K+   D +LW+ +   EP W     G GRPGWHIEC
Sbjct: 186 VSGLSETEMLELFAERGGDPGRRGKRQALDPLLWRVARDGEPSWAGGELGSGRPGWHIEC 245

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           + ++  YL   F + GGG DLIFPHHE     +     +   A  + H G + L+G KMS
Sbjct: 246 TVIAQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLTGV-PLARHFAHAGMVGLDGEKMS 304

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN + +++L    +          IRLA+L  HYR    +T     +A+  L++W  
Sbjct: 305 KSKGNLVLVSKLRAAGE------EPAAIRLAILAHHYRTDWSWTEAGFAQAKTRLAEWRD 358

Query: 340 TST-----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------DLLPIFNAS 388
             T     S   +   + S L NDLN   A+ A+ + A  + +        D   + +A 
Sbjct: 359 ALTMAPGESAATLIAEMRSELANDLNAPGALAAVDRWAVAAKQQAGAGSPMDQALVSDAV 418

Query: 389 AHILGIEV 396
             +LG+E+
Sbjct: 419 NALLGVEL 426


>gi|255027861|ref|ZP_05299847.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 300

 Score =  332 bits (852), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 108/307 (35%), Positives = 155/307 (50%), Gaps = 43/307 (14%)

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
           MI +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV     K++  DF
Sbjct: 1   MIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNERKQDELDF 60

Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
            LWK + P E  WESP+G GRPGWHIECSA++  YLG   DIH GG DL+FPHHE+EIAQ
Sbjct: 61  TLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPHHEDEIAQ 120

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A   +  AN W+HN FLN++G KMSKS GNFIT++++L+            VIR  M
Sbjct: 121 SEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKDN-------DPNVIRFFM 172

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKW------------------------PQTSTSKGII 347
           L  HYR+PI      L +A+  L +                          +       +
Sbjct: 173 LSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDEWLEQLTEL 232

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEV 396
             A    + +D NT +AI   H+LA+ +               + L +    A +LG+++
Sbjct: 233 KQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLFAEVLGLKL 292

Query: 397 CKEHLNK 403
                + 
Sbjct: 293 ENTQTDS 299


>gi|332841659|ref|XP_509736.3| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial [Pan
           troglodytes]
          Length = 591

 Score =  331 bits (850), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 131/554 (23%), Positives = 208/554 (37%), Gaps = 121/554 (21%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L  +              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 49  ETGVQVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVF 108

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   +  V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT 
Sbjct: 109 GCN-IVMVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTV 161

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II  G+AY  A   + FD  S  + YG                
Sbjct: 162 YLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPGPVGEPGFS 221

Query: 180 P---------------------EKYHKKNPADFILWKRSTPMEPGWESPWGRGR---PGW 215
                                     ++       W        GW      GR   PG 
Sbjct: 222 AHLKASYTYIIFSRSSVFCCYRVSEKRRLLRRDTAWGMLPTG--GWRGFHQGGRLDFPGG 279

Query: 216 HIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
             + S      L G   DIH GG+DL FPHHENEIAQ     + E+  N ++H+G L+ +
Sbjct: 280 GDQLSFCGGGMLFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHAK 339

Query: 275 G--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR------ 326
           G   KMSKS  N+ITI + L       +++   V R   L + YR  ID++         
Sbjct: 340 GKEEKMSKSLKNYITIKDFL-------KTFSPDVFRFFCLRSSYRSAIDYSDSAMLQAQQ 392

Query: 327 --------LTEAEILLS--------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
                   L +A   +         +             AV +AL +D +T   + A+  
Sbjct: 393 LLLGLGSFLEDARAYMKGQLACGSVREAMLWERLSSTKRAVKAALADDFDTPRVVDAILG 452

Query: 371 LARESTKNH-----------------DLLPIFNASAHILGIEVCKEH------LNKNISI 407
           L                          ++  F      +GI +  +           +  
Sbjct: 453 LTHHGNGQLRASLKEPGGPRSPAVFGAIISYFEQFFETVGISLANQQYVSGDGSEATLHG 512

Query: 408 AIEKLVQERLILLKMKKFSSA-----------------------DYIRKQLESKGFILED 444
            +++LV+ R  + +   F+ A                       D +R+ L + G  ++D
Sbjct: 513 VVDELVRFRQKVRQ---FALAMPEATGDAQRQQLLERQPLLEACDTLRRGLTAHGINIKD 569

Query: 445 YKNPDNGQRMTRWK 458
             +  +      W+
Sbjct: 570 RSSTTS-----TWE 578


>gi|72389845|ref|XP_845217.1| cysteinyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|62359925|gb|AAX80350.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei]
 gi|70801752|gb|AAZ11658.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei brucei
           strain 927/4 GUTat10.1]
          Length = 785

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 124/479 (25%), Positives = 190/479 (39%), Gaps = 82/479 (17%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           D   R+                + I+  ++++   E  ++           +  + F +D
Sbjct: 191 DTSGRIQSAIKAGDFDELFDAASGINGDLLDQ--LEGHTVTDQKIFDDHARRYERLFFED 248

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSF- 165
             RL    P    R T ++PQ++  IQ I+ +G AY     + FDT++      NY    
Sbjct: 249 MKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFAYSGETSVFFDTTAFIRAGHNYPKLK 308

Query: 166 --SRRK--------IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
             S R         + E +          K++P DF LWK S P EP W SPWG GRPGW
Sbjct: 309 PISERDECNTTEAEMAEGEGALAACVAGEKRSPNDFALWKFSKPGEPHWPSPWGAGRPGW 368

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIECS M+S  LG   DIH GG DL FPHH+NE AQS       +  N ++H G L+++G
Sbjct: 369 HIECSVMASDILGTNMDIHSGGCDLKFPHHDNECAQSEAYSMQHQWVNYFLHCGHLHIKG 428

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS  NFITI   L+             +RL  L   + + ++F+ Q + EA+    
Sbjct: 429 LKMSKSLKNFITIRHALDDLGVT-----PRTMRLLFLANQWNKAMNFSDQSIDEAKERER 483

Query: 336 KWPQTSTSKGII--------------------------DPAVLSALYNDLNTVSAIQALH 369
                  S  ++                          + AV +AL N+ +T +A++A+ 
Sbjct: 484 VLRSFFGSVDMVLRSDTLKEIQGFNEHDRKLNEAWISTESAVDAALRNNFDTPTAMEAIM 543

Query: 370 KLARESTKN------------HDLLPIFNASAHILGIEVCKE--------HLNKNISIAI 409
            L  E+ +             H +         + G+    +          +  +   +
Sbjct: 544 GLVSETNRYLVTGQRPSATLVHKVGRYVTRILQVFGVVDGNDMVGFTKTRQTDDQLVPVM 603

Query: 410 EKLVQ----ERLILLKMK---KF-SSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWKQ 459
           E L++     R           F    D IR + L   G  +ED  N       T WK+
Sbjct: 604 EALLRFRDSVRSEAKASGTTANFLPLCDAIRDEWLAQAGIRIEDSPNGP-----TTWKR 657



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           N++   + +F   +   +R Y CGPTVYD +H+G+AR  + FD+L R++  ++G K V Y
Sbjct: 42  NSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFDILRRIMEDFFGYK-VIY 100

Query: 69  VRNITDIDDKIIERARQEHPSIPIND 94
             NITDIDDKII+RAR         D
Sbjct: 101 QMNITDIDDKIIKRARVSSLLRHFRD 126


>gi|261328614|emb|CBH11592.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
           DAL972]
          Length = 785

 Score =  331 bits (849), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 124/479 (25%), Positives = 190/479 (39%), Gaps = 82/479 (17%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           D   R+                + I+  ++++   E  ++           +  + F +D
Sbjct: 191 DTSGRIQSAIKAGDFDELFDAASGINGDLLDQ--LEGHTVTDQKIFDDHARRYERLFFED 248

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSF- 165
             RL    P    R T ++PQ++  IQ I+ +G AY     + FDT++      NY    
Sbjct: 249 MKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFAYSGETSVFFDTTAFIRAGHNYPKLK 308

Query: 166 --SRRK--------IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
             S R         + E +          K++P DF LWK S P EP W SPWG GRPGW
Sbjct: 309 PISERDECNTTEAEMAEGEGALAACVAGEKRSPNDFALWKFSKPGEPHWPSPWGAGRPGW 368

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           HIECS M+S  LG   DIH GG DL FPHH+NE AQS       +  N ++H G L+++G
Sbjct: 369 HIECSVMASDILGTNMDIHSGGCDLKFPHHDNECAQSEAYSMQHQWVNYFLHCGHLHIKG 428

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS  NFITI   L+             +RL  L   + + ++F+ Q + EA+    
Sbjct: 429 LKMSKSLKNFITIRHALDDLGVT-----PRTMRLLFLANQWNKAMNFSDQSIDEAKERER 483

Query: 336 KWPQTSTSKGII--------------------------DPAVLSALYNDLNTVSAIQALH 369
                  S  ++                          + AV +AL N+ +T +A++A+ 
Sbjct: 484 VLRSFFGSVDMVLRSDTLKEIQGFNEHDRKLNEAWISTESAVDAALRNNFDTPTAMEAIM 543

Query: 370 KLARESTKN------------HDLLPIFNASAHILGIEVCKE--------HLNKNISIAI 409
            L  E+ +             H +         + G+    +          +  +   +
Sbjct: 544 GLVSETNRYLVTGQRPSATLVHKVGRYVTRILQVFGVVDGNDMVGFTKTRQTDDQLVPVM 603

Query: 410 EKLVQ----ERLILLKMK---KF-SSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWKQ 459
           E L++     R           F    D IR + L   G  +ED  N       T WK+
Sbjct: 604 EALLRFRDSVRSEAKASGTTANFLPLCDAIRDEWLAQAGIRIEDSPNGP-----TTWKR 657



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 1/86 (1%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           N++   + +F   +   +R Y CGPTVYD +H+G+AR  + FD+L R++  ++G K V Y
Sbjct: 42  NSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFDILRRIMEDFFGYK-VIY 100

Query: 69  VRNITDIDDKIIERARQEHPSIPIND 94
             NITDIDDKII+RAR         D
Sbjct: 101 QMNITDIDDKIIKRARVSSLLRHFRD 126


>gi|295395900|ref|ZP_06806085.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294971173|gb|EFG47063.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 391

 Score =  330 bits (846), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 116/403 (28%), Positives = 179/403 (44%), Gaps = 32/403 (7%)

Query: 12  ERKITEF-QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
            R      + +     ++YVCG T YD  H+G+A   + FDVL+RL         VTYV+
Sbjct: 4   TRARGPLRKLVRGDEAKLYVCGITPYDATHLGHASTYVAFDVLHRLWIDAGY--SVTYVQ 61

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           NITD+DD ++ERA+              +  +    F  D   L  + PTH   A   + 
Sbjct: 62  NITDVDDPLLERAQA------TGVDWQELAREQIDLFRSDMEALRVIPPTHYIGAVEAMD 115

Query: 131 QMIYLIQNIILHGHAYEAN-NEIIFDTSSIPN--YGSFSRRKIDEQK----MGTRVPEKY 183
            +   +  ++  G AY  +  ++ F   S     +GS S    D            P+  
Sbjct: 116 IVARSVVELLDKGFAYSLDNGDVYFKIDSSYKPPFGSVSHYDADTMAKLFAERGGDPDVA 175

Query: 184 HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            K+NP D +LW+     EP W+      GRPGWHIEC+A++  Y G    + GGG DL F
Sbjct: 176 GKENPLDPLLWRAKREGEPSWDPDGLPAGRPGWHIECTAIAQEYAGLPLHVQGGGNDLAF 235

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE   A +  A      A  ++H G +  EG KMSKS GN + +++L E      +  
Sbjct: 236 PHHEMGAAHA-AAWLDTPLAQSYMHTGMVGYEGEKMSKSLGNLVLVSQLRE------QGV 288

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVLSALYN 357
               IRL +L  HYR    +    L +A   L +W + +          +   +   L +
Sbjct: 289 DPMAIRLTILDHHYRSDWMYDDGALAKATERLEQWRRAAQCGSHYVSKDVVRELRECLAD 348

Query: 358 DLNTVSAIQALHKLA---RESTKNHDLLPIFNASAHILGIEVC 397
           DL+T +A+  +   A    ++T   +   +  A   +LGI++ 
Sbjct: 349 DLDTPTALSLIDDWAAARDQNTSESESEAVVKAVDALLGIQLA 391


>gi|269124814|ref|YP_003298184.1| cysteine--tRNA ligase [Thermomonospora curvata DSM 43183]
 gi|268309772|gb|ACY96146.1| Cysteine--tRNA ligase [Thermomonospora curvata DSM 43183]
          Length = 372

 Score =  329 bits (845), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 119/346 (34%), Positives = 171/346 (49%), Gaps = 19/346 (5%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
            + RMYVCG T YD  H+G+AR  +  DV  R+LR+      V   RN+TD+DD +   A
Sbjct: 21  GHARMYVCGITPYDTTHLGHARTFVWADVAARVLRHAG--NTVKVCRNVTDVDDVLTRAA 78

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           ++               +     F +D   L   + THQPRA N+I + I L Q ++  G
Sbjct: 79  QR------AGSPYDSFAAVQQYYFEQDMAALGVHSVTHQPRAHNYIRETIALAQALLDLG 132

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
           HAY     + F  + +P      R+  +D        PE   K +P D  LW+ S   EP
Sbjct: 133 HAYLREGAVYFRGAHVPGQAGLDRQTALDLLAEYGDDPEDPRKDDPFDIALWRPSEAGEP 192

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPW  GRPGWH EC++M+    G   D+H GG DL FPHH  E A +     +   A
Sbjct: 193 AWPSPWSAGRPGWHAECASMALAIFGPALDLHAGGADLRFPHHAYESALAEAMTGVRPFA 252

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             W+H G ++ +G KM+KS GN + + +LL       +  PA V+RLA+L T + +   +
Sbjct: 253 RAWLHVGMVSKDGAKMAKSTGNLVFVADLL-------KEHPASVLRLALLSTPWAQEWHY 305

Query: 323 TVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYNDLNTVSAI 365
           T   L+ A   L +    +   G     D AV +AL +DLN  +A+
Sbjct: 306 TPGDLSAAAARLDRLHTAAGRPGSSPAADEAVTAALLDDLNVDAAL 351


>gi|167519473|ref|XP_001744076.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777162|gb|EDQ90779.1| predicted protein [Monosiga brevicollis MX1]
          Length = 667

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 127/440 (28%), Positives = 187/440 (42%), Gaps = 70/440 (15%)

Query: 72  ITDIDDKIIER--ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           + D  D  + R             D    ++     +F +D + L         R T ++
Sbjct: 135 LIDAADFALARYLDANRTTDEFDKDIFLKLSQHWEAEFFQDMSALNVEPADVITRVTGYV 194

Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSF-----SRRKIDEQKMGTRV 179
           PQ++  IQ II +G AYE+N  + FD +         Y           K+     G   
Sbjct: 195 PQIVAYIQRIIDNGFAYESNGSVYFDVTKFRTDKDHTYAKLKPEAVGNDKLLSDGEGALS 254

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K+N +DF LWK S P EP W SPWG+GRPGWHIECSAM+S  LG   DIH GG+D
Sbjct: 255 GAGSEKRNQSDFALWKASKPGEPSWTSPWGQGRPGWHIECSAMASDILGDNMDIHSGGVD 314

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH+NE+AQS    + ++  N ++H+G L++EG KMSKS  NFITI + LET     
Sbjct: 315 LQFPHHDNELAQSEAYFQNDQWVNYFLHSGHLHIEGLKMSKSLKNFITIKQALET----- 369

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-------------ILLSKWPQTSTSKGI 346
             + A  IR   L+  + + ++++     EA+               LS+  Q   +   
Sbjct: 370 --YTARQIRFMFLLHSWTDTLNYSADAFEEAQVYERVFKEFFLNIKALSREAQGRDAGEK 427

Query: 347 IDPAVLS--------ALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASAHIL-- 392
              AV          AL ++++T +A+Q    L  E          L     A A  L  
Sbjct: 428 DLLAVFETKKLAIHTALCDNIDTATAMQHARDLVSECNTRLQSMSALTHAMRAVAEYLTR 487

Query: 393 -----GIEVCKEHLN--------KNISIAIEKLV-------QERLILLKMKK---FSSAD 429
                G+    E +            ++ +E L+       Q R +    K        D
Sbjct: 488 LFVCFGLIPSGEEIGFPRDDGTVSAEAVLMEPLLRFAELRDQIRQLARANKDKDVLELCD 547

Query: 430 YIRKQ-LESKGFILEDYKNP 448
            +R + L   G  LED ++ 
Sbjct: 548 KVRDEALPKLGVRLEDKESG 567



 Score = 93.4 bits (231), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/70 (55%), Positives = 48/70 (68%), Gaps = 1/70 (1%)

Query: 18 FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
          F       +  Y CGPTVYD AH+G+AR  + FD+L R+LR Y+G   V +V NITDIDD
Sbjct: 1  FVPQQGPRVTWYACGPTVYDAAHLGHARSYVSFDILRRILREYFGYD-VQFVMNITDIDD 59

Query: 78 KIIERARQEH 87
          KII RARQ+H
Sbjct: 60 KIIIRARQQH 69


>gi|149912421|ref|ZP_01900960.1| cysteinyl-tRNA synthetase [Moritella sp. PE36]
 gi|149804500|gb|EDM64593.1| cysteinyl-tRNA synthetase [Moritella sp. PE36]
          Length = 276

 Score =  327 bits (840), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 97/290 (33%), Positives = 140/290 (48%), Gaps = 41/290 (14%)

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
            P EP W SPWG GRPGWHIECSAM++  LG+VFDIHGGG DL+FPHHENE+AQSCCA  
Sbjct: 1   KPGEPRWVSPWGEGRPGWHIECSAMNNKILGEVFDIHGGGSDLMFPHHENEVAQSCCAHN 60

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            E   N W+H+G + ++  KMSKS  NF TI ++LE        +    +R  ++  HYR
Sbjct: 61  GE-YVNTWMHSGMVQIDKVKMSKSLNNFFTIRDVLE-------KYDGESVRYFLISGHYR 112

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------PAVLSALYNDLNTVSAI 365
             ++++   L +A   L +         + +                +A+ +D NT  A 
Sbjct: 113 SQLNYSEDNLKQARASLERLYTALRGVTVAEIDGVVPDCEAYVETFKAAMDDDFNTPEAF 172

Query: 366 QALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL-------NKNISIAIE 410
             L +LA+E          +  +L         +LG+                +    IE
Sbjct: 173 PVLFELAKEINRIKETDEKRAGELAAQLITFGEVLGLLSQDPEAFLQGDTGADDEVAEIE 232

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            L+++R      K +  AD  R +L + G +LED      G   T W++K
Sbjct: 233 ALIKQRNDARVSKDWGMADDARDKLNALGIVLED------GANGTSWRRK 276


>gi|257068786|ref|YP_003155041.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
 gi|310947175|sp|C7MCZ4|MSHC_BRAFD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256559604|gb|ACU85451.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
          Length = 416

 Score =  326 bits (837), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 106/383 (27%), Positives = 174/383 (45%), Gaps = 30/383 (7%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++++T   +IT    + P   R+YVCG T YD  H+G+A      D++ R LR     
Sbjct: 18  PLRLHDTRTGRITPVVPLTPGTARLYVCGITPYDSTHLGHAATYHAADLMRRALRDSGL- 76

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             V   +N+TD+DD ++ERA ++            + +  +  F +D   L  +AP    
Sbjct: 77  -AVEMAQNVTDVDDPLLERADRD------GVDWRELAASQSALFAEDMEALRVIAPETYR 129

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDTSSIPNYGSFSRRKIDEQ---- 173
             +  + ++I ++  +   G AY          +   D ++    G  S    ++     
Sbjct: 130 SVSEAMDEIIAVVLALHARGRAYPVEAADAAGPDWYLDLAADGALGDVSGWSEEQMLAVF 189

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFD 232
                 P++  K+   D +LW      EP W++   GRGRPGWH+EC  ++   +G  FD
Sbjct: 190 AERGGDPDREGKRGRFDPLLWSAEREGEPAWDAGVLGRGRPGWHVECVCIAEEGIGLPFD 249

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +  GG DLIFPHH+   A S         A  + H+G +  +G KMSKS GN + ++ L+
Sbjct: 250 VQAGGSDLIFPHHDLSAAHSVAL--GRPFAAAYAHSGMVGYQGEKMSKSLGNLVFVHRLV 307

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDP 349
                        VIRL ++  HYR   ++T   L  A   L  +   +           
Sbjct: 308 R------EGTDPMVIRLVLMAHHYRSDWEWTDGELDRAAERLKSYRLAARRGDHRPATVE 361

Query: 350 AVLSALYNDLNTVSAIQALHKLA 372
           A+ +AL +DL+TV A++AL   A
Sbjct: 362 ALRAALRDDLDTVRALEALDAWA 384


>gi|328869460|gb|EGG17838.1| cysteinyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 640

 Score =  325 bits (834), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 137/433 (31%), Positives = 192/433 (44%), Gaps = 80/433 (18%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           NI  Y CGPTVYD +H+G+AR  +  D++ R++  Y+    V +V  +TDIDDKII++++
Sbjct: 120 NISWYSCGPTVYDSSHLGHARTYVTIDIIQRIINDYFNYN-VIHVMGMTDIDDKIIKKSK 178

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +         +   +     Q+FV D   L    P    R T HI  +I  I  I  +G 
Sbjct: 179 E------TGVSFQELARVKEQEFVDDMASLHVRPPLLITRVTEHIDNIIDFIGKIKENGF 232

Query: 145 AYEANNE----IIFDTSSIPN-YGSFSRRK--IDEQKMGTRVPEKYHKKNPADFILWKRS 197
           AY+  ++    I+FDT  + + YG F      I +  +   V     K++  DF LWK +
Sbjct: 233 AYDVQSDNTNSILFDTKQMGDRYGKFVYNDNIISDDTLKINVD---AKRDARDFALWKGT 289

Query: 198 ------TPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
                    +     WESP+G+GRPGWHIECS+M     G   DIH GG+DL FPHHENE
Sbjct: 290 YGNDYDKDGKGTIVSWESPFGKGRPGWHIECSSMIESVFGNKLDIHAGGIDLKFPHHENE 349

Query: 249 IAQSCCADRIEK---------TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           IAQ                    N +IH G LN++G KMSKS  NFITI E L+T     
Sbjct: 350 IAQCEANFSPTPNTETGEYDQWINYFIHIGHLNIQGLKMSKSLKNFITIREYLKTN---- 405

Query: 300 RSWPAPVIRLAMLMTHYREPIDFT-------------------VQRLTE-AEILLSK--- 336
               A  +R   LM  Y + ID+                     QRL E  ++ L +   
Sbjct: 406 ---TADSLRWICLMNRYYDKIDYNPNNDYSSLPNKFYGWFGLVEQRLKEPLDMNLERSKF 462

Query: 337 --WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------ 382
               Q   +       V  AL  D NT  AI+++  L   +  + + L            
Sbjct: 463 TDAKQYIDAFNTTKNEVHQALSQDFNTAKAIRSMGNLVSLTLASPNQLVSSVPQDILSNI 522

Query: 383 -PIFNASAHILGI 394
                    I G+
Sbjct: 523 NDYIRRMFSIFGL 535


>gi|256825221|ref|YP_003149181.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|310947190|sp|C7NHQ9|MSHC_KYTSD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256688614|gb|ACV06416.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 438

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 112/433 (25%), Positives = 185/433 (42%), Gaps = 57/433 (13%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++++T    IT           +YVCG T YD  H+G+A   + FD++ R LR       
Sbjct: 20  RVHDTARGAITPLTPRPGQEAGLYVCGITPYDATHLGHAATYLTFDLVNRALRAAG--HP 77

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +V+N+TD+D+ ++ERA ++            + S+  Q F  D   L  +AP     A
Sbjct: 78  VRFVQNVTDVDEPLLERAERDGVHW------EELASREIQLFRDDMAALRIIAPDAYVGA 131

Query: 126 TNHIPQMIYLIQNIILHGHAYE------------ANNEIIFDTSSIPNYGSFSRRKIDEQ 173
              IP  +  I+ ++  G AY             +  ++  D + +P +G  S     + 
Sbjct: 132 VEGIPSDVAAIRAMLESGRAYRVPAEDAAADAGESPADVYLDLAQVPTFGEVSHWTPTQM 191

Query: 174 KM----GTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLG 228
                     P++  K++  D +LW+     EP WE    G GRPGWHIEC+ ++  +LG
Sbjct: 192 MEVFADRGGDPDRAGKRDRLDPLLWRAHREGEPHWEGGSLGAGRPGWHIECTTIARDHLG 251

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             F + GGG DL+FPHHE   AQ+      +  A  ++H   + L+G KMSKS GN + +
Sbjct: 252 TPFLVQGGGDDLVFPHHEMSAAQTRALT-DDAFAEHYVHQAMVGLDGEKMSKSKGNLVLV 310

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------ 342
           + L    +          IRLA+L  HYR   ++T   L  A   L +W   +       
Sbjct: 311 SRLRAAGE------DPAAIRLALLSQHYRTAWEWTDAHLEAARQRLDRWRHAAQTATASP 364

Query: 343 ---------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLP 383
                    +   +   +   + +DL+   A+  + + A                     
Sbjct: 365 STADAEDAPAGDAVARQLAERIADDLDAPGALAVVDRWADAVLGEQTGAAAAAARAEARG 424

Query: 384 IFNASAHILGIEV 396
           +  A   +LGI++
Sbjct: 425 VRTAVDALLGIDL 437


>gi|159037918|ref|YP_001537171.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
 gi|310947215|sp|A8M264|MSHC_SALAI RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|157916753|gb|ABV98180.1| Cysteine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 412

 Score =  324 bits (831), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 110/411 (26%), Positives = 184/411 (44%), Gaps = 34/411 (8%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + ++++  + +            MYVCG T YD  H+G+A  MI FD++ R+ R    +
Sbjct: 18  PLMLFDSARQGVAASTPTGTG--TMYVCGITPYDATHLGHAATMITFDLVQRVWRDAGLD 75

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
             VTYV+N+TDIDD ++ERA ++       +   ++  + T  F +D   L  + P H  
Sbjct: 76  --VTYVQNVTDIDDPLLERAARD------GEDWKVLAMRETALFREDMVALRIIPPAHYV 127

Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQK----MG 176
            A   IP +   +  ++    AY  +    ++ FD S+ P +G  S    ++        
Sbjct: 128 GAVESIPDIAERVLTLVKEEAAYRIDDGTGDVYFDISAAPRFGYESNLGREQMLKIFPER 187

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDIHG 235
              P++  K++P D +LW+ +   EP W           WHIEC+ ++ + LG   D+ G
Sbjct: 188 GGDPDRAGKRDPLDPLLWRSARADEPSWPGGGLGPGRPGWHIECAVIALNLLGHRIDVQG 247

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHE   A +         A  ++H G + L G KMSKS GN + ++ L   +
Sbjct: 248 GGNDLIFPHHECSAAHAELLTGQSPFAQHYVHAGMIGLAGEKMSKSRGNLVFVSRLRADR 307

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PA 350
                      +RLA++  HYR    +    L  A+  L +W + + +           A
Sbjct: 308 ------VDPMAVRLALMSGHYRSDRSWNDDLLVTAQKRLDRWRRAAAAPSGPSARTFLAA 361

Query: 351 VLSALYNDLNTVSAIQALHKLARES---TKNHDLLPIF--NASAHILGIEV 396
               L +DL++  A+      A  +   T +    P     A   +LG+ +
Sbjct: 362 FRERLADDLDSPGALTLADSWADAALVGTGDDQAAPALFARAVDALLGVRL 412


>gi|328766817|gb|EGF76869.1| hypothetical protein BATDEDRAFT_92152 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 755

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 125/444 (28%), Positives = 185/444 (41%), Gaps = 85/444 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             QE              +     F  D   L    P    R + +IP++I  +Q I+ +
Sbjct: 209 DSQEGAKTTDQQIFRDYAAYWEADFFHDMDSLNIRRPDVLTRVSEYIPEIIAFVQKIMSN 268

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKID----------EQKMGTRVPEKYHKKNPADFI 192
           G+AYE +  + FDT         S  KI+          ++  G    +   K+N +DF 
Sbjct: 269 GYAYEFDGSVYFDTVCFDRSDKHSYAKIEPWSAGNVKLVQEGEGDLTADTSGKRNISDFA 328

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           LWK S P EP W SPWG GRPGWHIECSAM+   LG+  DIH GG+DL FPHH+NE+AQS
Sbjct: 329 LWKSSKPGEPSWSSPWGEGRPGWHIECSAMAGCVLGEKIDIHSGGIDLTFPHHDNELAQS 388

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                  +  N ++H G L++EG+KMSKS  NFI+I E LE          A  IR+  L
Sbjct: 389 EGHFGCTQWVNYFMHTGHLHIEGQKMSKSLKNFISIKEALEQS-------TAQQIRIMYL 441

Query: 313 MTHYREPIDFTVQRLTEAE----------------ILLSKWPQ---------TSTSKGII 347
           + H+   +D++   L+EA                     K+ +          S  K ++
Sbjct: 442 LHHWDSTLDWSAGSLSEARTIEVSINNFLALVKALAQEEKFKERVISETHNYGSAEKELM 501

Query: 348 D------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-----LGIEV 396
           D       A+ +AL +  NT  A+  L +L   S + +       A+ +I     +G+ V
Sbjct: 502 DVLFQKQEAIYAALADSFNTPLAMTELRQLISVSNQYYQTKNKVKATPNITILAKIGVYV 561

Query: 397 CK--------EHLNKNISIAI--------EKLV-----------QERLILLKMKK----F 425
            K          +N      +        E L+             R +           
Sbjct: 562 TKLLRTFGVYPDINPEFGAPVTEGAQNSEEALMPYLRVLSSFRDAVRELAQAKADPVEFL 621

Query: 426 SSADYIRK-QLESKGFILEDYKNP 448
             +D +R   L   G IL+D ++ 
Sbjct: 622 KLSDRLRDMDLFELGVILDDKEDG 645



 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 1/102 (0%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ I N+L RK   F       +  Y CGPTVYD +H+G+AR    FD++ R++  Y+G
Sbjct: 22  PRLYINNSLTRKKELFVPEKGRRVTWYSCGPTVYDKSHVGHARTFFSFDIVRRIMSEYFG 81

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
              + YV NITDIDDKII  ARQ+H      +A  ++     
Sbjct: 82  YD-LQYVMNITDIDDKIIVSARQKHLFAKYKEANPVLNESVI 122


>gi|325963276|ref|YP_004241182.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469363|gb|ADX73048.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 425

 Score =  323 bits (828), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 118/424 (27%), Positives = 188/424 (44%), Gaps = 49/424 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++Y+T   +    +    ++  MYVCG T YD  H+G+A   + FD+L R  R    
Sbjct: 17  PAIRLYDTAAGREVALE--QENHPSMYVCGITPYDATHMGHASSYVAFDLLNRAWRDAGQ 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YV+N+TD+DD ++ERA               + +   + F  D   L  L P H 
Sbjct: 75  E--VAYVQNVTDVDDPLLERA------TATGVDWRDLAAGQIELFQTDMEALNVLPPDHY 126

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNY---------GSFS 166
             A   I  ++  ++ ++  G AY       E + ++ +D  +             G  S
Sbjct: 127 VGAVESIGLIVPEVERLVSLGLAYKVDGTNGEPDGDVYYDVEAAGKQSVAPDAWTLGCIS 186

Query: 167 RRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSA 221
                E           P +  K+   D +LW+     EP W     G GRPGWHIEC+ 
Sbjct: 187 GLNESEMLELFAERGGDPGRAGKRQALDPLLWRVEREGEPSWPGGSLGPGRPGWHIECTV 246

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           ++  YL + F + GGG DLIFPHHE     +     +   A  + H G + L+G KMSKS
Sbjct: 247 IAQKYLPQPFTVQGGGSDLIFPHHEMGAGHAYSLAGV-PLARHYAHAGMVGLDGEKMSKS 305

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GN + +++L    +          IRL +L  HYR    +T     +A+ +L+ W Q  
Sbjct: 306 KGNLVLVSKLRAAGE------DPAAIRLGILAHHYRSDWSWTDHGFEDAKAILASWRQAL 359

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------HDLLPIFNASAH 390
               + S   +  A+  AL  DLN  +A+ A+++ A ++  +       D   + +A   
Sbjct: 360 PHAPAGSAAPLVAAMREALAADLNAPAAVAAVNRWAEQALSDGGPASPADQAMVRDAVDA 419

Query: 391 ILGI 394
           +LG+
Sbjct: 420 LLGV 423


>gi|159111673|ref|XP_001706067.1| Cysteinyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|11528339|gb|AAG37230.1| cysteinyl-tRNA synthetase [Giardia intestinalis]
 gi|157434160|gb|EDO78393.1| Cysteinyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 645

 Score =  322 bits (827), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 146/544 (26%), Positives = 227/544 (41%), Gaps = 117/544 (21%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + + N+L  ++ E +   PS +  Y+CGPTVYD  H+G+AR  + FDV+ R+L  Y+
Sbjct: 5   PTSVWLTNSLTGRLEELRTHAPSTVLAYICGPTVYDSTHLGHARTYVTFDVVRRILEDYF 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V Y  NITD+DDKII RA      +    +I  I  K  Q+F+ D   L+    T 
Sbjct: 65  GLR-VRYQCNITDVDDKIIARA------VERGSSIFDICRKYEQEFLSDMHTLSVRPFTV 117

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-------DEQK 174
             R T ++  +I  IQ I+ +G AY +   + FD ++  + G +S  K+       DE +
Sbjct: 118 VTRVTEYMADIILFIQKIMDNGFAYVSAGSVYFDVAAARSAG-YSYPKLRPLGSSSDELQ 176

Query: 175 MGTRVPEK-------YHKKNPADFILWKRSTPMEP---GWESPWG------------RGR 212
           +  +  +          K++ +DF LWK     EP    W++ +              GR
Sbjct: 177 LLIQNADGMDSKNRVSEKRSASDFALWKAWKETEPEDAKWDATFSHKNGAVSELITLPGR 236

Query: 213 PGWHIECSAMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           PGWHIECSAM++  LGK     FD+H GG DL FPHH+NE+ Q       +     ++H+
Sbjct: 237 PGWHIECSAMAAAVLGKDTGGAFDLHLGGCDLQFPHHDNELIQLETWAGKKNMIGCFLHS 296

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L + G  MSKS  NF T+ E+L         + A  +R+   M  Y   +D+++  + 
Sbjct: 297 GHLKIAGDVMSKSKKNFKTVREILSI-------FTANQVRMLFCMVPYSASLDYSISMMD 349

Query: 329 EAEILLSKWP-----------------------QTSTSKGIIDPAVLS-------ALYND 358
            A     K                         + ST++  ++   +        A  ND
Sbjct: 350 AAVAKDKKITSFLSNCRQIIQHEEELSEPIKNLRYSTTEEALEAQTIEFLSNVDTAFRND 409

Query: 359 LNTVSAI-----------QALHKLARESTKNHDLL--PIFNASAHILGIEVCKEHLNKNI 405
           +N VSA+             +     E  +    L     +   H+L I     +     
Sbjct: 410 INIVSAMSHVMLLIDNCKAYIFACQTEGRQVSTFLLSNARDKIVHVLSIMGFS-YARGET 468

Query: 406 SIAIEKLVQER---LILLKMKKFSSA---------------------DYIRKQ-LESKGF 440
           S A   L   R       ++K    A                     D +R + L   GF
Sbjct: 469 STAENALQVARVVCNFRREIKDLLMASTTNTAETDTKTLKKMLLGLCDRLRDEHLPLTGF 528

Query: 441 ILED 444
            +ED
Sbjct: 529 AIED 532


>gi|170782058|ref|YP_001710390.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|310947179|sp|B0RC50|MSHC_CLAMS RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|169156626|emb|CAQ01778.1| putative cysteinyl-tRNA synthetase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 409

 Score =  322 bits (826), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 114/421 (27%), Positives = 179/421 (42%), Gaps = 48/421 (11%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++T    +   +      + +YVCG T YD  HIG+A   + FD L R+      +  V
Sbjct: 1   MFDTSAGSVRPAECTGDGRVGLYVCGITPYDATHIGHASTYLAFDTLQRVWLDRGYD--V 58

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N+TD+DD ++ERA               + ++  + F  D   L  L P      T
Sbjct: 59  AYVQNVTDVDDPLLERA------TATGVDWRDLAAEQVELFRTDMEALRILPPDSYVGVT 112

Query: 127 NHIPQMIYLIQNIILHGHAYE---------ANNEIIFDTSSIPNYGSF-----SRRKIDE 172
             + ++   +  ++  G AY             ++ FD +     G +     S   +D 
Sbjct: 113 EVVDEVASAVAELVRRGTAYPVATPDAVVAGAQDLYFDVARAGEDGPWALGDESGYDLDT 172

Query: 173 QKMGT----RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
               +      PE+  K++P D +LW+     EP W+S  GRGRPGWHIEC+ ++   L 
Sbjct: 173 MAALSAERGGDPERPGKRDPLDPLLWRAERAGEPAWDSVVGRGRPGWHIECAVIALRKLD 232

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           +   + GGG DLIFPHHE     +      E  A ++ H+G +  +G KMSKS GN + +
Sbjct: 233 RPVTVQGGGSDLIFPHHEMSAGHAAALTG-EDFACVYAHSGMVAYQGEKMSKSLGNLVLV 291

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------------S 335
           + L               IRLA+L  HYR   ++T + L E+   L             +
Sbjct: 292 SRLRAA------GVDPRAIRLALLAQHYRADWEWTDELLAESVARLAAWDAWAAAADASA 345

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
                +   G +   V   L  DL+T  AI  L    R +T          A   +LG+ 
Sbjct: 346 TAGADAGEPGELVQLVRERLSEDLDTPGAILLLD--LRVATGVPATPVELAAVDALLGVR 403

Query: 396 V 396
           +
Sbjct: 404 L 404


>gi|308177410|ref|YP_003916816.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744873|emb|CBT75845.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 420

 Score =  322 bits (825), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 116/419 (27%), Positives = 190/419 (45%), Gaps = 40/419 (9%)

Query: 3   KKIKIYNTLER--KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             ++++NT     ++T       +   MYVCG T YD  H+G+A   + FD++ R  R  
Sbjct: 17  PTLELFNTATGTQQVTAPADQAAAPASMYVCGITPYDATHMGHAATYVTFDLVQRTWRDA 76

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
              + V Y +NITD+DD ++ERA         N     +     Q F  D   L  + P 
Sbjct: 77  G--RSVAYTQNITDVDDPLLERAEA------TNVDWRELAESQIQLFRDDMEALNVIPPQ 128

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNY----GSFSRRK 169
           +   A   I  ++ +++ ++    AY           ++ FDT    N     GS S   
Sbjct: 129 NYIGAVESIHWLVPVVEQLLEADLAYVVPAGADGVEGDVYFDTMGAQNDAWKLGSVSNYD 188

Query: 170 IDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSS 224
            +            P++  K++  D +LW+ +   EP W+    G GRPGWHIECS ++ 
Sbjct: 189 RETMLRFFAERGGDPQRAGKRDALDPLLWRAAREGEPSWDGGKLGEGRPGWHIECSVIAR 248

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             L   F + GGG DLIFPHHE   A +   D  E  A  ++H G + L+G KMSKS GN
Sbjct: 249 KTLPAPFTVQGGGSDLIFPHHEFSAAHAAAGDHAE-LAQTYVHTGMVGLDGEKMSKSLGN 307

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
            + +++L               IR  +L  HYR    +T + L  A+  ++ W +   S 
Sbjct: 308 LVLVSKLRAA------GVEPVAIRAVLLSQHYRTDWFWTDELLAGAQQRVATWRKALESA 361

Query: 345 GIIDPA-----VLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGIEV 396
            + D       +   + NDL+  SA++A+ + A +  S++      + +    +LG+++
Sbjct: 362 SMQDAQQVIAGIREHMANDLDAPSALKAIDQWATQPASSQGEGATALRDGINALLGLKL 420


>gi|294811722|ref|ZP_06770365.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|326440529|ref|ZP_08215263.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294324321|gb|EFG05964.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
          Length = 409

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 111/358 (31%), Positives = 174/358 (48%), Gaps = 23/358 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++I++T          + P  + R+YVCG T YD  H+G+A     FD++ R+     
Sbjct: 17  RDLQIHDTATGGA---ITLTPGPVARIYVCGITPYDATHLGHAATYNAFDLVQRVW--LD 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            ++ V YV+N+TD+DD ++ERA      +   +  + +  + T  F +D T L  L P H
Sbjct: 72  TKRQVHYVQNVTDVDDPLLERA------LRDGEDWTRLAERETALFREDMTALRMLPPKH 125

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
              A   IP+++ L++ ++  G AYE + +I F   S P++G  S       ++ +    
Sbjct: 126 YIGAVEAIPRIVPLVERLLGAGAAYELDGDIYFSVESDPHFGEVSHLDAAAMRLLSAERG 185

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDIHGG 236
             PE+  KKNP D +LW  +   EP W+          WHIEC A++  +LG  FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWLAARSGEPSWDGGGLGPGRPGWHIECVAIALDHLGMGFDVQGG 245

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G DL+FPHHE   + +         A  ++H G + L G KMSKS GN + ++ L     
Sbjct: 246 GSDLVFPHHEMGASHAQVLTGEHPFAQAYVHAGMVALHGEKMSKSRGNLVFVSALRRD-- 303

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                     IRLA+L  HYR   ++T   L EA   L++W    +         L A
Sbjct: 304 ----GVDPAAIRLALLAHHYRADWEWTDGVLQEAVERLARWRAAVSRPDGPPADALLA 357


>gi|152965802|ref|YP_001361586.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|310947187|sp|A6W933|MSHC_KINRD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|151360319|gb|ABS03322.1| Cysteine--tRNA ligase [Kineococcus radiotolerans SRS30216]
          Length = 419

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 106/415 (25%), Positives = 183/415 (44%), Gaps = 38/415 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +++T    +      +     +YVCG T YD  H+G+A   + FD+L R  R    
Sbjct: 17  PRVHLHDTATGGLVPVGP-EAGTATLYVCGITPYDATHLGHANTYVAFDLLGRAWRDAGL 75

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V YV+N+TD+DD ++ERA               +     + F  D   L+ + P   
Sbjct: 76  D--VRYVQNVTDVDDPLLERAEA------TGVDWRDLAESQVELFRGDMEALSVVPPQRY 127

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-------NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
                 +  +   +++++  G AY         + ++ F   +   +G+     ++    
Sbjct: 128 LGVVEAVDLVAEAVRDLLAAGAAYRVPGTDGGPDGDVYFPVDADAAFGTVGGYDLETMLA 187

Query: 176 GT----RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKV 230
            +      P++  K+NP D +LW+   P EP WE    GRGRPGWHIEC+A++  +LG  
Sbjct: 188 LSAERGGDPQRPGKRNPLDPLLWRVERPGEPAWEAGELGRGRPGWHIECTAIALEHLGMP 247

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCAD-RIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            D+  GG DL+FPHHE   A +     R    A  + H+G + L+G KMSKS GN + ++
Sbjct: 248 IDVQAGGSDLVFPHHEMGAAHAHLLRPRARPFARAYAHSGMVALDGEKMSKSKGNLVLVS 307

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSK 344
            L+               RLA++  H+R   ++T + L +A     +W            
Sbjct: 308 RLVAAGVPAAVV------RLAIVDHHWRTDWEWTDEVLAQARARHERWSAAVAAPAGPPA 361

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARES--TKNHDLLP---IFNASAHILGI 394
             +   V   L +DL+   A+ A+     ++  T   D      +    + +LG+
Sbjct: 362 EALLATVRERLADDLDAPGAVAAVDAWVEQARTTAGTDAQAPDLVRRTVSALLGV 416


>gi|308160745|gb|EFO63218.1| Cysteinyl-tRNA synthetase [Giardia lamblia P15]
          Length = 645

 Score =  320 bits (820), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 131/434 (30%), Positives = 204/434 (47%), Gaps = 57/434 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + I N+L  ++ E +   PS +  Y+CGPTVYD  H+G+AR  + FDV+ R+   Y+
Sbjct: 5   PTSVWITNSLTGRLEELRTRAPSTVLAYICGPTVYDSTHLGHARTYVTFDVIRRIFEDYF 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + V Y  NITD+DDKII RA      +    +I  +  K  Q+F  D   L+    T 
Sbjct: 65  GLR-VHYQCNITDVDDKIIARA------VERGSSIFDVCRKYEQEFFSDMRTLSVRPFTV 117

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-------DEQK 174
             R T ++  +I  IQ I+ +G AY +   + FD     N G +S  K+       DE +
Sbjct: 118 VTRVTEYMADIILFIQKIMDNGFAYVSAGSVYFDVVVARNAG-YSYPKLRPLGSSSDELQ 176

Query: 175 MGTRVPEK-------YHKKNPADFILWKRSTPMEP---GWESPWG------------RGR 212
           +  +  +          K++ +DF LWK     EP    W++ +              GR
Sbjct: 177 LLIQNADGVDSKNRVSEKRSSSDFALWKAWKETEPEDAKWDATFSRKNGAVSELITLPGR 236

Query: 213 PGWHIECSAMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           PGWHIECSAM++  LGK     FD+H GG DL FPHH+NE+ Q     + +     ++H+
Sbjct: 237 PGWHIECSAMAAAALGKNTEGAFDLHLGGCDLQFPHHDNELIQLETWAKKKNMIGCFLHS 296

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L + G  MSKS  NF T+ E+L         + A  +R+   M  Y   +D+++  + 
Sbjct: 297 GHLKIAGDVMSKSKKNFKTVREVLNI-------FTANQVRMLFCMVPYSASLDYSISMMD 349

Query: 329 EAEI-------LLSKWPQTSTSKGIIDPAVLSALYNDL-NTVSAIQALHKLARESTKNHD 380
            A          LS   Q    +  +   + +  YN +  T+ A Q +  L+       +
Sbjct: 350 AAVAKDKKITSFLSNCRQIIQHEEELSEPIKNLRYNTMEETLEA-QTIEFLSNVDIAFRN 408

Query: 381 LLPIFNASAHILGI 394
            + I +A  HI+ +
Sbjct: 409 DISIVSAMNHIMSL 422


>gi|332024052|gb|EGI64270.1| Cysteinyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 732

 Score =  319 bits (819), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 126/466 (27%), Positives = 190/466 (40%), Gaps = 95/466 (20%)

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSK---------NTQQFVKDTTRLACLAPTHQ 122
           I    D +++ A+            S IT              +F KD   L  L P   
Sbjct: 163 IIRFQDALLKEAKDPLADWLDKIKGSTITEHSIFNKISKHWEAEFHKDMDALNILKPNVL 222

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-------------YGSFSRRK 169
            R + ++ ++I  IQ II +G+AYE+N  + FD                   YG  S  +
Sbjct: 223 TRVSEYVEEIITFIQQIIDNGYAYESNGSVYFDVDKFDKQEKHSYAKLVPEAYGDTSSLE 282

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
             E  + T   +   KK+  DF LWK S   EP WESPWGRGRPGWHIECS M+S   G+
Sbjct: 283 EGEGDLSTTADKLSEKKSVTDFALWKCSKAGEPWWESPWGRGRPGWHIECSVMASAICGE 342

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DIH GG+DL FPHH+NE+AQ+            ++H+G L + G KMSKS  NF+TI 
Sbjct: 343 SLDIHTGGVDLKFPHHDNELAQAEACFNNSHWVRYFLHSGHLTIAGCKMSKSLKNFVTIQ 402

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLS----------- 335
           + L       + + +  +RLA L+  +++ +D++   +  A   E  L+           
Sbjct: 403 DAL-------KKYSSRQLRLAFLLHSWKDTLDYSDNTMNMAVQYEKFLNEFFLNIKCKIR 455

Query: 336 --------------KWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLAREST- 376
                         KW                ++  AL ++++T + +  + +L      
Sbjct: 456 SLGTNTTTTIDSFIKWSNLEVKLNEKFYLAKHSIHKALCDNIDTRTVLNLIRELVTNCNV 515

Query: 377 -----KNHDLL----------PIFNASAHI------LGIEVCKEHLNKNISIA----IEK 411
                KN +LL           IF     +      +G  +  E +N N+       +E 
Sbjct: 516 YMSQSKNPNLLLLRDIAVYITKIFTIFGAVSSSYNSIGFPINDEIVNTNVEETVMPYVEI 575

Query: 412 LVQERLILL------KMKK-FSSADYIRKQ-LESKGFILEDYKNPD 449
           LV  R  +       K K      D +R   L + G  LED    +
Sbjct: 576 LVNFREKVRNCAKTLKAKDILQECDQLRDDILPNVGVRLEDSNEGE 621



 Score =  126 bits (318), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 7/95 (7%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L       Y   
Sbjct: 20  LRLYNSLTREKEIFVPQFGNRVLWYSCGPTVYDASHMGHARSYISFDIL-------YFGY 72

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
            + YV NITDIDDKII+RARQ +      +    +
Sbjct: 73  DILYVMNITDIDDKIIKRARQNYLYEKYVEENHSL 107


>gi|253742420|gb|EES99254.1| Cysteinyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 644

 Score =  319 bits (818), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 148/541 (27%), Positives = 221/541 (40%), Gaps = 112/541 (20%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + I N+L  ++ E +   PS +  Y+CGPTVYD  H+G+AR  + FD+  R+L  Y+
Sbjct: 5   PTSVWITNSLTGRLEELRTRAPSTVLAYICGPTVYDSTHLGHARTYVTFDIARRILEDYF 64

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G + + Y  NITD+DDKII RA      I    +I  I  K   +F+ D   L+    T 
Sbjct: 65  GLR-IHYQCNITDVDDKIIARA------IERGSSIFDICRKYEHEFLSDMRALSVRPFTV 117

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS------RRKIDEQKM 175
             R T ++  +I  IQ II +G AY +   + FD  +  N G             DE ++
Sbjct: 118 LTRVTEYMADIILFIQKIIDNGFAYVSAGSVYFDVVAARNAGYVYPKLRPLGSSSDELQL 177

Query: 176 GTRVPEK-------YHKKNPADFILWKRSTPMEP---GWESPWG------------RGRP 213
             +  +          K++ +DF LWK     EP    W + +              GRP
Sbjct: 178 LIQNVDGIDSKNRVAEKRSSSDFALWKAWKETEPEDAKWNATFSYKDGDKLEQITLPGRP 237

Query: 214 GWHIECSAMSSHYLGKV----FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
           GWHIECSAM++  LGK     FD+H GG DL FPHH+NE+ Q     R ++    ++H+G
Sbjct: 238 GWHIECSAMAAAVLGKSTEGAFDLHLGGCDLQFPHHDNELIQLETWARNKEMIGYFMHSG 297

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L + G  MSKS  NF T+ E+L         + A  +R+   M  Y   +D+++  +  
Sbjct: 298 HLKIAGDVMSKSKKNFRTVREILSI-------FTANQVRMLFCMVPYNASLDYSISMMDA 350

Query: 330 AEIL-----------------------LS--KWPQTSTSKGIIDPAVL----SALYNDLN 360
           A                          L   ++  +  +        L    +A  ND+N
Sbjct: 351 AVAKDKKITSFLANCHQIIHADELSRPLENLRYDASEEALAAQSMEFLSNIDAAFRNDIN 410

Query: 361 TVSAIQALHKLA------------RESTKNHDLLPIFN-ASAHILGIEVCKEHLNKNISI 407
            VS +  +  L             RE   N  LL        HIL I       N++   
Sbjct: 411 IVSVMNHIISLIDSCKAYIFACQTREKQINTFLLSSVRDKIVHILSIMGFSYAENESPKA 470

Query: 408 AIEKLVQE-----RLILLKM-------------KKFSSA-----DYIRKQ-LESKGFILE 443
                V +     R  +  +             K    A     D +R + L   GF +E
Sbjct: 471 ENALQVAKVVCNFRKGIRDLLVTSTADAADVDVKVLKKALLRLCDELRDEHLPPTGFAIE 530

Query: 444 D 444
           D
Sbjct: 531 D 531


>gi|116747926|ref|YP_844613.1| cysteine synthases [Syntrophobacter fumaroxidans MPOB]
 gi|116696990|gb|ABK16178.1| cysteine synthases [Syntrophobacter fumaroxidans MPOB]
          Length = 773

 Score =  317 bits (814), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 111/492 (22%), Positives = 195/492 (39%), Gaps = 56/492 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++     +N LERK  +F+ +    +R+ V GP + +   +G +R  ++ D L R L   
Sbjct: 302 LEPDFHFFNFLERKKVDFKPVVEGKVRICVTGPPLDNPLTLGESRRFLLADFLARFLTAK 361

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
                V  V  + D+D      +R    S+     +S  T +     ++D  RLA     
Sbjct: 362 SF--SVEQVVQVPDLD------SRTIGGSLASRMPLSAYTRQQLDLILEDLDRLAVKRAY 413

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
             PR++ HI  +    + ++  G AY+    + F+ S   +YG+ SR  + + ++GT V 
Sbjct: 414 RYPRSSEHINAITEDTKTLVNKGLAYDKLRSVYFNLSGSKDYGALSRVNLKKIRIGTTVD 473

Query: 181 -EKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
            + Y K NP DF L KR+T  E       ++ WG   P WHI  ++++   LG   DI  
Sbjct: 474 LDAYEKLNPRDFALLKRATLAELKRGVCLKTDWGNVIPTWHIAAASVALRELGAPIDIQV 533

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
             +D +FPH EN           +  AN+W+ +      G  + + +G    ++E    +
Sbjct: 534 SSVDFLFPHLENVREIGHALTG-KPFANVWMLSER-MWSGADVKREDG----LSEETPIR 587

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------- 339
           +     +    +R  +L  HYR+PI  T + +  A     +  +                
Sbjct: 588 ELNKLGYSPIEVRYWLLSNHYRKPIHVTPENIDNARRGYHRLREFIHRVQHARTASQDHK 647

Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
                   ++     AL +DLN   A   L +  R+     D           +  +F  
Sbjct: 648 LLPEMIYALEQGFFDALADDLNVPRAFACLFRFIRQFNPILDREEFSEAQRRQITDVFYK 707

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
              I+GI   +             L+  R       ++ +AD IR+ L  +G  + D   
Sbjct: 708 INGIMGIFDLELQPLSEDDQE---LIHRREKARGSGEWDTADRIRETLLQRGLKVIDT-- 762

Query: 448 PDNGQRMTRWKQ 459
                  TRW++
Sbjct: 763 ----PLGTRWER 770


>gi|73982655|ref|XP_863344.1| PREDICTED: similar to cysteinyl-tRNA synthetase isoform c isoform 3
           [Canis familiaris]
          Length = 827

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 117/439 (26%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 282 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 341

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT         +YG      + +QK                  K++P DF L
Sbjct: 342 ASNGSVYFDTVKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 401

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 402 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 461

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 462 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 514

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKG---- 345
             +++ +D++   +  A                             KW    +       
Sbjct: 515 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDLLRAPVDISGRFEKWEDEESELNKSFY 574

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 575 DKKAAVHEALCDNVDTRTVLEEMRALVSQCNLYMATRKAARRRPNRALLESIALYLTRML 634

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 635 KIFGAIEEESSLGFPVRGPGTSPDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 694

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G  LED++ 
Sbjct: 695 ALRDDILPELGVRLEDHEG 713



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+G 
Sbjct: 111 KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFGY 170

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
               Y  NITD+DDKII+RARQ +      +
Sbjct: 171 DVF-YCMNITDVDDKIIKRARQNYLFEEYRE 200


>gi|256832427|ref|YP_003161154.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Jonesia denitrificans DSM 20603]
 gi|310947186|sp|C7R3Z4|MSHC_JONDD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|256685958|gb|ACV08851.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Jonesia denitrificans DSM 20603]
          Length = 423

 Score =  317 bits (813), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 126/421 (29%), Positives = 188/421 (44%), Gaps = 41/421 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +++ +T   ++ E          MYVCG T YD  HIG+A   I FD+LYR       
Sbjct: 17  TSVRVMDTSSGQLVETVRPGVGESSMYVCGITPYDATHIGHAATYIAFDLLYRAW--LDA 74

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            + V Y  N+TD+DD ++ERA             + + +     F  D + L  L P   
Sbjct: 75  GQRVVYTSNVTDVDDPLLERA------TATGVDWTELATSQITLFFDDMSALGVLPPHTY 128

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPNYGSFSRRKI 170
             A   +P +I   ++++  G AY                +I  D +S P++GS S    
Sbjct: 129 LSAVESVPMVISATRHLLESGRAYRVPVPAQERPVHSPAYDIYADVTSDPDFGSISGYTS 188

Query: 171 DEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSH 225
           +E+          P    KKNP D I+WK     EPGW+    G GRPGWHIEC+ ++  
Sbjct: 189 EERVRLFTDRGGDPATPGKKNPIDPIMWKAQREGEPGWDGDDLGWGRPGWHIECTTIAHC 248

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            +G+   + GGG DLIFPHHE   A +      +  A++  H G +  +G KMSKS GN 
Sbjct: 249 GIGRSCTVQGGGSDLIFPHHEMSSAHARALFGQDAGASVHAHAGLIAYQGEKMSKSKGNL 308

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           + ++ L +             IRLA+L  HYR+  ++T   L         W Q  ++ G
Sbjct: 309 VFVSRLRQ------EGVDPMAIRLAILANHYRDEWEWTSDVLDAGIKRHQLWLQAMSTNG 362

Query: 346 IIDP-----AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIE 395
              P     A+  AL NDL+   A+ A+   A  +   +D  P     +  A   +LGI 
Sbjct: 363 GPHPGATLAAMREALSNDLDAPRALDAVDAWAYATLAGNDEDPGAPGVVSRAVNALLGIR 422

Query: 396 V 396
           +
Sbjct: 423 L 423


>gi|269795398|ref|YP_003314853.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|310947217|sp|D1BHU9|MSHC_SANKS RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|269097583|gb|ACZ22019.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 425

 Score =  317 bits (812), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 120/423 (28%), Positives = 188/423 (44%), Gaps = 47/423 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           ++++++   ++    A +  +  +YVCG T YD  HIG+A   + FD+L R  R     +
Sbjct: 19  VRVHDSSTGRLV--VAAEGPSASLYVCGITPYDATHIGHAATYVAFDLLGRAWRDAG--Q 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTY  N+TD+DD ++ERA               +  + T  F +D T L  + P     
Sbjct: 75  QVTYASNVTDVDDPLLERA------TATGVEWQDLAVEQTALFAEDMTALGVVPPDVYLG 128

Query: 125 ATNHIPQMIYLIQNIILHGHAYE------------ANNEIIFDTSSIPNYGSFSRRK--- 169
           A   IP +   ++ ++  G AY             A  ++  D ++   +G  SR     
Sbjct: 129 AVETIPPVAAAVEELVAAGAAYRVPLEEGAGGDAPALGDVYADVTADSAFGQVSRMDEAT 188

Query: 170 -IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYL 227
            ++        P +  K+N  D +LW+R  P EP WE    G GRPGWHIEC+ ++   L
Sbjct: 189 MLELFAERGGDPGRAGKRNALDPLLWRRERPGEPAWEAGSLGTGRPGWHIECAVIARAGL 248

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT---ANIWIHNGFLNLEGRKMSKSNGN 284
           G  FD+ GGG DL+FPHHE   + +      +     A   +H G +  +G KMSKS GN
Sbjct: 249 GLPFDVQGGGSDLLFPHHEMSTSHARLIGDGDVHGVGAATHVHAGLVGYQGEKMSKSRGN 308

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
            + ++ L               IRLA+L  HYR   ++T   LTE       W    +  
Sbjct: 309 LVFVSRLR------AEGVEPMAIRLALLAHHYRSDWEWTDASLTEGVARFETWRSAVSGN 362

Query: 345 GIID-----PAVLSALYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILG 393
           G  D       V +AL +DL+   A+ A+ + A  S    +         +  A   +LG
Sbjct: 363 GGPDADATLAEVRAALADDLDAPRALAAVDRWAELSLAGTEKPVEGAPGVVSRAVNALLG 422

Query: 394 IEV 396
           + +
Sbjct: 423 VRL 425


>gi|154333641|ref|XP_001563077.1| cysteinyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134060087|emb|CAM37400.1| putative cysteinyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 780

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 123/432 (28%), Positives = 179/432 (41%), Gaps = 79/432 (18%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
                 K  + F +D  RL    P    R T ++PQ++  +Q II +G AY     + FD
Sbjct: 232 FEDHARKYERAFFEDMQRLGIRDPDIVSRVTEYVPQVVEFVQKIIDNGFAYVGETSVFFD 291

Query: 156 TSSI----PNYGSF---SRRKIDEQKMGTRV-----PEKYHKKNPADFILWKRSTPMEPG 203
           T +      +Y        R   E++M           +  K++  DF LWK S P EP 
Sbjct: 292 TEAYIRAGHDYPKLKPGGDRNTTEEEMAEGEGTLTKAVEGEKRSSNDFALWKFSKPGEPR 351

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECS M+S  LG+  DIH GG DL FPHH+NE AQS   +   +  N
Sbjct: 352 WPSPWGAGRPGWHIECSVMASDVLGENMDIHSGGWDLKFPHHDNECAQSEACNLHNQWVN 411

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H G L+++G KMSKS  NFITI + L+             +RL  L + + +P++F+
Sbjct: 412 YFLHCGHLHIKGLKMSKSLKNFITIRQALDDLGVT-----PRTMRLLFLASPWYKPMNFS 466

Query: 324 VQRLTEAEI----------------LLSKWPQTSTSKG----------IIDPAVLSALYN 357
            Q L EA+                     W  T                 + AV +AL +
Sbjct: 467 DQSLDEAKEKERVLRAFFGSVDIVLRADNWKATQGVNTYDRELLGKCIEAEAAVHAALQD 526

Query: 358 DLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILG-------IEVCK 398
           + +TV A+Q L  L   + +               +         + G       + + K
Sbjct: 527 NFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYVTKMFRVFGVVEGSDDVGLQK 586

Query: 399 EHLNKNISIAIE---KLV----QERLILLKMKKFS----SADYIRKQ-LESKGFILEDYK 446
           +    + +  IE    LV    + R    + K  +      D +R + L   G  LED  
Sbjct: 587 QGSGDDETRFIEVMNALVRFRDEVRDAAKEQKAVAAFLPLCDKVRDEWLVDAGVRLEDNP 646

Query: 447 NPDNGQRMTRWK 458
                   T WK
Sbjct: 647 AGP-----TAWK 653



 Score =  118 bits (295), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G
Sbjct: 36  NGLKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMEDYFG 95

Query: 63  EKCVTYVRNITDIDDKIIERAR 84
              V Y  NITDIDDKII+RAR
Sbjct: 96  -YSVLYQMNITDIDDKIIKRAR 116


>gi|163840786|ref|YP_001625191.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|310947209|sp|A9WSI9|MSHC_RENSM RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|162954262|gb|ABY23777.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 423

 Score =  316 bits (810), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 110/400 (27%), Positives = 180/400 (45%), Gaps = 43/400 (10%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +++++  + +     +  ++  +YVCG T YD  H+G+A   + FD+L R+ R       
Sbjct: 20  QLFDSASKTLRAL-PV-AADASLYVCGITPYDATHMGHAATYLAFDLLGRVWRDSGA--S 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V YV+N+TDIDD ++ERA ++            +     + F  D T L  +AP     A
Sbjct: 76  VNYVQNVTDIDDPLLERADRD------GVDWRELAESQIELFRADMTALNVIAPQQYIGA 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSS-------IPNYGSF--------SRRK 169
              I  ++  ++ +I  G AY  +  ++ FDT +         N G          S   
Sbjct: 130 IEAIQWIVPAVEELIAEGFAYRMDSGDVYFDTVAASVKTPDSSNAGELGAWWLGQISGLS 189

Query: 170 IDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSS 224
            +E           PE+  K+NP D +LW+     EP W     G GRPGWHIEC+ ++ 
Sbjct: 190 PEEMLPVFAERGGDPERDGKRNPLDPLLWRVERAGEPAWPGASLGDGRPGWHIECTVIAR 249

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            +L   F + GGG DL+FPHHE     +   D     A  + H G + L+G KMSKS GN
Sbjct: 250 KFLPAPFSVQGGGSDLLFPHHEMGDGHAWALDHT-PLAKHYAHAGMVGLDGEKMSKSRGN 308

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
            + ++ L               +RL++L  HYR    +T + L  +++ L++W       
Sbjct: 309 LVLVSALR------AEGVDPMAVRLSILANHYRSDWSWTAELLERSKLRLAQWRAAMEHT 362

Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
              S   +   + +AL  DL+  +A+ A+     +     
Sbjct: 363 SVGSAAQLVSEIRTALAADLDAPTALNAVDNWVGQKATTE 402


>gi|309813142|ref|ZP_07706866.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Dermacoccus sp. Ellin185]
 gi|308432946|gb|EFP56854.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Dermacoccus sp. Ellin185]
          Length = 420

 Score =  316 bits (810), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 112/417 (26%), Positives = 186/417 (44%), Gaps = 41/417 (9%)

Query: 4   KIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++T   +I     ID      +YVCG T YD  H+G+A   + FD+  R++     
Sbjct: 21  DVRLFDTAAGEI---VPIDLGEQAGLYVCGITPYDATHLGHAATYVTFDIAQRVMIDAGA 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV+N+TD+DD ++ERA ++            + +   + F  D   L  + P H 
Sbjct: 78  Q--VTYVQNVTDVDDPLLERAARD------GVDWRELATSEIELFHGDMEALGVIPPQHY 129

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-----------NEIIFDTSSIPNYGSFSRRKID 171
                 +      +  ++  G AY  +            ++  D +  P +GS S    +
Sbjct: 130 VGVVESMTLHSTNVARLLERGLAYTVDVPAAENAAAGAKDVYLDLAQQPTFGSVSHWDRE 189

Query: 172 EQKM----GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG--WHIECSAMSSH 225
           +           PE+  K++  D +LW+     EP W+   G GR    WHIEC++++  
Sbjct: 190 QMMAVFADRGGDPEREGKRDVFDPLLWRAEREGEPAWDGGPGVGRGRPGWHIECTSIALE 249

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           +LG  F + GGG DLIFPHHE    Q+         A+ + H G +  +G KMSKS GN 
Sbjct: 250 HLGNGFTLQGGGTDLIFPHHEMSAVQANALTGQPPFAHHYAHQGMVGYDGEKMSKSKGNL 309

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           + ++ L               IRL +L  HYR   ++T   L  A+  L+ W +   + G
Sbjct: 310 VKVSVLRR------EGVDPMAIRLVLLDQHYRTDWEYTDALLDAAKERLATWRRAIEADG 363

Query: 346 I----IDPAVLSALYNDLNTVSAIQALHKL--ARESTKNHDLLPIFNASAHILGIEV 396
           +       AV  AL +DL+T +A+ A+     A           I +    +LG+++
Sbjct: 364 VDATPTIEAVRRALRSDLDTPAALAAIDAWCAAEGEEAVGSAQQIHDVVDALLGVKL 420


>gi|312374234|gb|EFR21828.1| hypothetical protein AND_16292 [Anopheles darlingi]
          Length = 744

 Score =  316 bits (809), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 122/461 (26%), Positives = 182/461 (39%), Gaps = 92/461 (19%)

Query: 74  DIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
           D  D + E    +   S+  N     +      +F KD   L  L      R + ++P++
Sbjct: 181 DSKDPLSELLDSKRGSSVTENAIFETLPRYWEDEFHKDMRALNVLPADVLTRVSEYVPEI 240

Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSF------SRRKIDEQKMGTRVPE 181
           +  I+ II  G AYEAN  + FD +        +Y           R++ E +      E
Sbjct: 241 VTYIERIIERGLAYEANGSVYFDVARFDGRPEHHYAKLVPEAYGDARQLQEGEGDLSTGE 300

Query: 182 KY--HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF LWK S   EP W+SPWG+GRPGWHIECSAM+S   G   DIH GG+D
Sbjct: 301 DRLGEKRSPNDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASAICGDYLDIHTGGVD 360

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH+NE+AQS   D   +    ++H G L + G KMSKS  NF+TI + LE      
Sbjct: 361 LKFPHHDNELAQSEAHDGSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQALERH---- 416

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------------------EIL 333
               A  +RLA L+  +++ +D++   +  A                             
Sbjct: 417 ---TATQLRLAFLLHSWKDTLDYSDNTMEMAVQYERLLNEFFLNVKDLTRHVVAGKPRDA 473

Query: 334 LSKW----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA-------RESTKNHDLL 382
             +W     +     G    AV  AL ++++T SA+ A+  L        +E   +  L 
Sbjct: 474 FDRWTPVEAELERKFGETKAAVHEALCDNVDTRSALDAIRGLVSLCNVYIKEHRTSRTLN 533

Query: 383 PIF--------NASAHIL----------GIEVCKEHLNKNISIAIEKLV----------- 413
            +             HI           G  +          + +E+ V           
Sbjct: 534 ALLLRRIASYCTDLLHIFGAIEGPRGGIGFPIASGSAGNAGPVDLEQTVMPYLSTLAEFR 593

Query: 414 -QERLILLKMKK---FSSADYIRKQLE-SKGFILEDYKNPD 449
              R     +K        D +R  L  + G  LED  +  
Sbjct: 594 TAVREQARTLKATDILKLCDALRDDLLPALGVRLEDRDDGT 634



 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 46/114 (40%), Positives = 66/114 (57%), Gaps = 2/114 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YN+L R+   F   D  N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G
Sbjct: 18  PRLHLYNSLTRRKELFVPRDGRNVQWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFG 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSI-PINDAISIITSKNTQQFVKDTTRLA 115
              V YV NITDIDDKII+RARQ H     + +A ++   +      +      
Sbjct: 78  YN-VLYVMNITDIDDKIIKRARQNHLYEQYLEEAKAVPLERLLDDSQEVMAAFR 130


>gi|157865847|ref|XP_001681630.1| cysteinyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68124928|emb|CAJ02484.1| putative cysteinyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 784

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 131/452 (28%), Positives = 185/452 (40%), Gaps = 82/452 (18%)

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
            D + ER+        I +       K  + F +D  RL    P    R T ++PQ++  
Sbjct: 215 GDLLDERSGHSVSDQQIFEDH---ARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEF 271

Query: 136 IQNIILHGHAYEANNEIIFDTSSI----PNYGSFS-----RRKIDEQKMGTRV---PEKY 183
           +Q II +G AY     + FDT +      +Y             DE   G  V     + 
Sbjct: 272 VQKIIDNGFAYAGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEG 331

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP W SPWG GRPGWHIECS M+S  LG+  DIH GG DL FP
Sbjct: 332 EKRSPNDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFP 391

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HH+NE AQS   +   +  N ++H G L+++G KMSKS  NFITI + L+      R   
Sbjct: 392 HHDNECAQSEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDELGVTAR--- 448

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------D 348
              +RL  L   + +P++F+ Q L EA+           S  I+               D
Sbjct: 449 --TMRLLFLANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRADNWKATQGVNKHD 506

Query: 349 PAVLSA-----------LYNDLNTVSAIQALHKLARESTKN------------HDLLPIF 385
             +LS            L ++ +TV A+Q L  L   + +               +    
Sbjct: 507 RELLSKWVEAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYV 566

Query: 386 NASAHILG-------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKK-------FSS 427
                I G       + + K+  +   +  IE    LV+ R  +    K           
Sbjct: 567 TKMFRIFGVVEGSDDVGLQKQGSDDGEARFIEVVNTLVRFRDEVRNAAKDHKVVAGFLPL 626

Query: 428 ADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
            D +R + L   G  LED          T WK
Sbjct: 627 CDKVRDEWLVDAGVRLEDNPAGP-----TTWK 653



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 10/113 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G
Sbjct: 36  NGLKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMEDYFG 95

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              V Y  NITDIDDKII+RAR     +   +          +    D  +L 
Sbjct: 96  -YSVIYQMNITDIDDKIIKRARVNKLLVDFKE---------EELRHSDVAKLM 138


>gi|170049267|ref|XP_001855148.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167871109|gb|EDS34492.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 738

 Score =  316 bits (809), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 121/443 (27%), Positives = 179/443 (40%), Gaps = 88/443 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            R+E  S+  N     +      +F KD   L  L P    R + ++PQ++  IQ II +
Sbjct: 190 DRKEGSSVSENSIFETLPRYWEDEFHKDMDALNVLPPDVLTRVSEYVPQIVEYIQKIIEN 249

Query: 143 GHAYEANNEIIFDTSSI-----PNYGSF------SRRKIDEQKMGTRVPEKYHKKNPADF 191
           G AYEAN  + FD +        +Y           + + E +      +   K++  DF
Sbjct: 250 GLAYEANGSVYFDVAGFDAREKHHYAKLVPEAYGDAKSLQEGEGDLSGDQSSEKRSANDF 309

Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
            LWK S   EP W+SPWGRGRPGWHIECSAM+S   G   DIH GG+DL FPHH+NE+AQ
Sbjct: 310 ALWKCSKAGEPWWDSPWGRGRPGWHIECSAMASDICGDFLDIHTGGVDLKFPHHDNELAQ 369

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D   +    ++H G L + G KMSKS  NF+TI + L       +   A  +RLA 
Sbjct: 370 SEAHDNSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQAL-------QKHTATQLRLAF 422

Query: 312 LMTHYREPIDFTVQRLTEA---EILLSKW---------------------------PQTS 341
           L+  +++ +D++   +  A   E  L+++                               
Sbjct: 423 LLHSWKDTLDYSENTMEMAVQYERQLNEFFLNVKDLTRHVVSGKPRDRFNPWTPVESDLQ 482

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNAS 388
                   AV  AL ++++T +A+ A+  L   S                 ++       
Sbjct: 483 QKLNASKAAVHEALCDNIDTRTALDAIRDLISYSNVYIRDHKSALNALLLRNIATYITEL 542

Query: 389 AHILG-----------------------IEVCKEHLNKNISIAIEKLVQERLILLKMKK- 424
            HI G                           +E +   +S   E     R     +K  
Sbjct: 543 LHIFGAIVGPRGGIGFPVGGSAGTADVRFFFLEETVMPYLSALAEFRAAVREQARTLKAS 602

Query: 425 --FSSADYIRKQ-LESKGFILED 444
              +  D IR   L + G  LED
Sbjct: 603 EILALCDQIRDDTLPNLGVRLED 625



 Score =  138 bits (347), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 46/98 (46%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++YN+L R+   F   D  N+R Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 18  EPRLRLYNSLTRQKELFVPRDGRNVRWYSCGPTVYDASHMGHARSYISFDILRRVLTDYF 77

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           G   V YV NITDIDDKII+RARQ +      +  S +
Sbjct: 78  GFN-VLYVMNITDIDDKIIKRARQNYLYERYVERTSSL 114


>gi|73982657|ref|XP_533205.2| PREDICTED: similar to cysteinyl-tRNA synthetase isoform b isoform 1
           [Canis familiaris]
          Length = 748

 Score =  315 bits (808), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 117/439 (26%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT         +YG      + +QK                  K++P DF L
Sbjct: 263 ASNGSVYFDTVKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKG---- 345
             +++ +D++   +  A                             KW    +       
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDLLRAPVDISGRFEKWEDEESELNKSFY 495

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 496 DKKAAVHEALCDNVDTRTVLEEMRALVSQCNLYMATRKAARRRPNRALLESIALYLTRML 555

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEESSLGFPVRGPGTSPDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G  LED++ 
Sbjct: 616 ALRDDILPELGVRLEDHEG 634



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+G 
Sbjct: 28  KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFGY 87

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
               Y  NITD+DDKII+RARQ +      +       
Sbjct: 88  DVF-YCMNITDVDDKIIKRARQNYLFEEYREKQPRAAQ 124


>gi|322816399|gb|EFZ24717.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 721

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 117/446 (26%), Positives = 180/446 (40%), Gaps = 80/446 (17%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             +E   +              + F +D  RL    P    R T ++PQ++  IQ I+ +
Sbjct: 222 DEREGQYVTDQSIFEDHARLYERLFFEDMRRLGIRDPDVVSRVTEYVPQVVDFIQKIMDN 281

Query: 143 GHAYEANNEIIFDTSSI----PNYGSF-----------SRRKIDEQKMGTRVPEKYHKKN 187
           G AY   + I FDT++      +Y              +  ++ E +    V     K+N
Sbjct: 282 GFAYRGTSSIFFDTTAFLRAGHDYPKLKPVSERGENDATEAEMAEGEGALTVGVAGEKRN 341

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
             DF LWK S P EP W SPWG GRPGWHIECS M+S  LG   D+H GG DL FPHH+N
Sbjct: 342 ANDFALWKFSKPGEPRWPSPWGAGRPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDN 401

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           E AQS       +  N ++H G L+++G KMSKS  NFITI + L+            V+
Sbjct: 402 ECAQSEACHMQHQWINYFLHCGHLHIKGLKMSKSLKNFITIRQALDELDVT-----PRVM 456

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------- 347
           RL  L  H+ +P++F+ Q + EA+           S  I+                    
Sbjct: 457 RLLFLANHWGKPMNFSDQSIEEAKERERVLRAFFGSVDIVLRKDNWGETQGLNDHDRRLQ 516

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
                 + AV +AL N+ +T +A+ ++  L   + +               +        
Sbjct: 517 ETWLTAENAVHAALQNNFDTPAAMDSVMGLVGATNRYLLSGERPSATLVRKVGRYVTRIL 576

Query: 390 HILGI--------EVCKEHLNKNISIAIEKLVQ----ERLILLKMK----KFSSADYIRK 433
            + G+           ++  +  +   ++ L++     R      K         D +R 
Sbjct: 577 QVFGVVEGTDMVGFATQQGSDDRLLTVMDALLRFRDGVRDAAKVEKCTETFLPLCDTVRD 636

Query: 434 Q-LESKGFILEDYKNPDNGQRMTRWK 458
           + L   G  +ED          T WK
Sbjct: 637 EWLVPAGIRIEDNPAGP-----TTWK 657



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 14/114 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ N+L   +  F   +   +R Y CGPTVY+ +H+G+AR  + FD+L R++  Y+G
Sbjct: 37  KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMEDYFG 96

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV--KDTTRL 114
              V Y  NITDIDDKII+RAR            S +  +  + F+  +D  RL
Sbjct: 97  -YQVVYQMNITDIDDKIIKRARI-----------SALLKRFREDFLQGRDMARL 138


>gi|321478384|gb|EFX89341.1| hypothetical protein DAPPUDRAFT_303176 [Daphnia pulex]
          Length = 730

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 117/444 (26%), Positives = 180/444 (40%), Gaps = 86/444 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             +    +  N   + +     ++F KD   L  L      R + ++P+++  I  II  
Sbjct: 180 DSKHGMDVSDNAIFASLPRHWEEEFYKDMAALNVLPADVITRVSEYVPEIVDYISRIIER 239

Query: 143 GHAYEANNEIIFDTSSI-----PNYGSF------SRRKIDEQKMGTRVPEK--YHKKNPA 189
           G AY AN  + F+ S         Y           + + E +    V E     KK+P 
Sbjct: 240 GLAYSANGSVYFNVSKFDSQKNHKYAKLVPEAYGDSKALQEGEGDLSVSEDRLSEKKSPN 299

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S   EP W+SPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+
Sbjct: 300 DFALWKTSKSGEPSWDSPWGKGRPGWHIECSVMASAILGSSMDIHTGGVDLKFPHHDNEL 359

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS      ++    ++H G L ++G KMSKS  NFITI + L           +  +R+
Sbjct: 360 AQSEAYYDNDEWVRYFLHTGHLTIQGCKMSKSLKNFITIQDALSRN-------SSRELRI 412

Query: 310 AMLMTHYREPIDFTVQRLTE--------------AEILLSKWPQTSTSKGIIDPA----- 350
             L+  ++E +D++   + E              A+ LL   P ++T+            
Sbjct: 413 FFLLHPWKETLDYSDSAMDEASSYEKMLREFFLNAKDLLRNGPSSNTAAEYFQKWSTAEQ 472

Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------F 385
                       V  AL ++++T +++ A+  +     K    L                
Sbjct: 473 EVNTRFVETKNRVREALCDNIDTKTSLDAIKSMISACNKYLAQLKQSANRVLIKVIAEYV 532

Query: 386 NASAHILGIEVCKEHL--------------NKNISIAIEKLVQERLILLKM-------KK 424
                I G+   K+ L               + +   +E L   R  + K        + 
Sbjct: 533 TRLFQIFGVIEGKQTLGFPSESSSGGTDNVEEIVMPVLEALADFREEVRKEARQLRATRV 592

Query: 425 FSSADYIRKQ-LESKGFILEDYKN 447
               D IR   L + G  LED +N
Sbjct: 593 LELCDQIRDDVLPNLGVRLEDREN 616



 Score =  142 bits (358), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 14/148 (9%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++KIYN+L RK   F   +  NI  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+
Sbjct: 10  SMELKIYNSLTRKKEVFTPQNGKNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRDYF 69

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL-----AC 116
           G   +TYV NITDIDDKII+RARQ +        +S + +  T    +   RL       
Sbjct: 70  GYD-ITYVMNITDIDDKIIKRARQNYLYEKYAAQMSELETLQTDV-KESVDRLTKQMAGT 127

Query: 117 LAPTHQP-------RATNHIPQMIYLIQ 137
             P  +        + T  I +    I+
Sbjct: 128 TDPDKKVMQEKMLAKVTAAIDKFTETIK 155


>gi|73982653|ref|XP_851224.1| PREDICTED: similar to cysteinyl-tRNA synthetase isoform c isoform 2
           [Canis familiaris]
          Length = 831

 Score =  315 bits (808), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 117/439 (26%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT         +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTVKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKG---- 345
             +++ +D++   +  A                             KW    +       
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDLLRAPVDISGRFEKWEDEESELNKSFY 578

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 579 DKKAAVHEALCDNVDTRTVLEEMRALVSQCNLYMATRKAARRRPNRALLESIALYLTRML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIEEESSLGFPVRGPGTSPDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G  LED++ 
Sbjct: 699 ALRDDILPELGVRLEDHEG 717



 Score =  138 bits (349), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+G 
Sbjct: 111 KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYFGY 170

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
               Y  NITD+DDKII+RARQ +      +       
Sbjct: 171 DVF-YCMNITDVDDKIIKRARQNYLFEEYREKQPRAAQ 207


>gi|224050868|ref|XP_002197995.1| PREDICTED: cysteinyl-tRNA synthetase [Taeniopygia guttata]
          Length = 831

 Score =  315 bits (808), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 117/439 (26%), Positives = 173/439 (39%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F KD   L  L P    R + ++P+++  ++ I+ +G+ Y
Sbjct: 286 GSQVTDNSIFSKLPKFWEAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVKKIVDNGYGY 345

Query: 147 EANNEIIFDTSSIPNYGSFSRRKI-------------DEQKMGTRVPEKYHKKNPADFIL 193
            +N  + FDT         S  K+              E  +         K +P DF L
Sbjct: 346 VSNGSVYFDTMKFDASEKHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKHSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W+SPWG+GRPGWHIECSAM    LG+  DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKSSKPGEPSWDSPWGKGRPGWHIECSAMGGSVLGESMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHTARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEA--------EILLS----------------KWPQTSTSKG---- 345
             +++ +D++   +  A        E  L+                KW            
Sbjct: 519 HSWKDTLDYSNNTMESAIQYEKFMNEFFLNVKDILRAPTDVTGQFQKWENQEVELNKNFY 578

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------------- 388
               A+  AL ++++T SA++ +  L  +S                              
Sbjct: 579 EKKAAIHEALCDNIDTRSALEEMRSLVSQSNSYIAAKKSSRQMPNRLLLENISSYLTQML 638

Query: 389 --------AHILGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
                      +G  V     N NI   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIESDDAIGFPVGGTSQNTNIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 1/96 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YN+L R    FQ  +   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ 
Sbjct: 110 SRLCLYNSLTRSKEVFQPQNGKKVLWYCCGPTVYDASHMGHARSYISFDILRRILRDYF- 168

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           +  V Y  NITDIDDKII+RARQ H      ++ S 
Sbjct: 169 KYDVFYCMNITDIDDKIIKRARQNHLFERYRESKST 204


>gi|83768602|dbj|BAE58739.1| unnamed protein product [Aspergillus oryzae]
          Length = 531

 Score =  315 bits (807), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 132/448 (29%), Positives = 208/448 (46%), Gaps = 65/448 (14%)

Query: 17  EFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
            F A+DP    +  Y CGPTVYD AH+G+AR     D++ R+L+ Y+ +  V +V NITD
Sbjct: 46  PFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKDYF-KFDVEFVMNITD 104

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
           +DDK+    R         +  + +T K  + F++D   L  L P    R T +  ++  
Sbjct: 105 VDDKL----RGSTVPGDAYEIFTKLTKKYEEHFMRDMRDLNVLDPDEITRVTEYGQEIAD 160

Query: 135 LIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            ++ I+ +   Y   +  + FD  S    G    R  +       +     K++P DF +
Sbjct: 161 FVEKIVTNDFGYVTLDGSVYFDIKSFEKAGHPYARDGE-----GTLSHAVEKRSPDDFAI 215

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W+S WG+GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+AQS 
Sbjct: 216 WKASRPGEPSWKSQWGQGRPGWHIECSAMASSRLGSQNDIHSGGIDLAFPHHDNELAQSE 275

Query: 254 CADRIE--KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                +  +  N ++H G L+++G KMSKS  NF T         + G   P P      
Sbjct: 276 AYWSEKKQQWVNYFLHMGHLSIQGSKMSKSLKNFATS----CGIGWEGTDIPEPA----- 326

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
                 +   + +  + +A        + + S+G +    L A+     T   I    +L
Sbjct: 327 ------KQFLYPLSAMRDA------LREATKSQGEVTHQQLKAI-----TAETI-VDERL 368

Query: 372 ARESTKNHDLLPIFNAS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
             ++++ +    +F    A I          +++   + ++L+            S  D 
Sbjct: 369 VSQASRPY--FQVFRDFHARI------SPSNSEDTPTSSKELL------------SLCDR 408

Query: 431 IRK-QLESKGFILEDYKN-PDNGQRMTR 456
           +R  +L   G  LED +N P   + +TR
Sbjct: 409 LRDVELFDLGIYLEDRENKPALVRPVTR 436


>gi|311113625|ref|YP_003984847.1| cysteinyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
 gi|310945119|gb|ADP41413.1| cysteinyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
          Length = 438

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 116/403 (28%), Positives = 173/403 (42%), Gaps = 53/403 (13%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T    + + Q  +P +  +YVCG T YD  H+G+A   + FDVL R  R       
Sbjct: 20  QIFDTSTGTVVQLQ--EPQHAGLYVCGITPYDATHMGHASTYVAFDVLNRAWRDAG--VT 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA               +  + T+ F  D   L  L P H    
Sbjct: 76  VTYVQNVTDVDDPLLERA------TATGVDWQELAEEQTELFRTDMEALHVLPPDHYVGV 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIP-------NY---- 162
              I  +  +I++++    AY                +I  D  ++         Y    
Sbjct: 130 VESIQWLFPVIEDLVERSLAYRVAGYVDEKGVQHPGGDIYLDLKAVQALPQNEDGYSWTP 189

Query: 163 GSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHI 217
           G  S    DE           PE+  K++P D +LW+     EP W+    G GRPGWHI
Sbjct: 190 GEVSHMSRDEMLDIFSERGGDPERSGKRDPLDPLLWRIKREGEPSWDAGSLGEGRPGWHI 249

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           EC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G K
Sbjct: 250 ECTMIARKFIDGPLTVQAGGSDLKFPHHDLGAGHSWAVSN-RPHALHYAHTGMVGLDGHK 308

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN + +++L               IRLA++  HYRE   +T + L +A+  L  +
Sbjct: 309 MSKSRGNLVLVSKLRAA------GVDPNTIRLAIMDHHYREDWFWTDEDLKKAQARLDLY 362

Query: 338 PQTSTSKGIID--------PAVLSALYNDLNTVSAIQALHKLA 372
            Q   S    D          V   L +DL T  A+ AL   A
Sbjct: 363 RQAVESANGTDSSAAEQALEKVREYLADDLKTSGALMALDAWA 405


>gi|322489357|emb|CBZ24616.1| putative cysteinyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 784

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 131/452 (28%), Positives = 184/452 (40%), Gaps = 82/452 (18%)

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
            D + ER+        I +       K  + F +D  RL    P    R T ++PQ++  
Sbjct: 215 GDLLDERSGHSVSDQQIFEDH---ARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEF 271

Query: 136 IQNIILHGHAYEANNEIIFDTSSI----PNYGSFS-----RRKIDEQKMGTRV---PEKY 183
           +Q II +G AY     + FDT +      +Y             DE   G  V     + 
Sbjct: 272 VQKIIDNGFAYVGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGVEG 331

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP W SPWG GRPGWHIECS M+S  LG+  DIH GG DL FP
Sbjct: 332 EKRSPNDFALWKFSKPGEPRWSSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFP 391

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HH+NE AQS   +   +  N ++H G L+++G KMSKS  NFITI + L+      R   
Sbjct: 392 HHDNECAQSEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDELGVTAR--- 448

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------D 348
              +RL  L   + +P++F+ Q L EA+           S  I+               D
Sbjct: 449 --TMRLLFLANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRADNWKATQGVNKHD 506

Query: 349 PAVLSA-----------LYNDLNTVSAIQALHKLARESTKN------------HDLLPIF 385
             +LS            L ++ +TV A+Q L  L   + +               +    
Sbjct: 507 RELLSKWVEAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYV 566

Query: 386 NASAHILG-------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKK-------FSS 427
                I G       + + K+      +  IE    LV+ R  +    K           
Sbjct: 567 TKMFRIFGVVEGSDDVGLQKQGSGDGEARFIEVVNTLVRFRDEVRDAAKDQKVVAGFLPL 626

Query: 428 ADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
            D +R + L   G  LED          T WK
Sbjct: 627 CDKVRDEWLVDAGVRLEDNPAGP-----TTWK 653



 Score =  119 bits (300), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 40/113 (35%), Positives = 59/113 (52%), Gaps = 10/113 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G
Sbjct: 36  NGLKVMNSLTESLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMEDYFG 95

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              V Y  NITDIDDKII+RAR         +          +    D  +L 
Sbjct: 96  -YSVIYQVNITDIDDKIIKRARVNKLLDDFKEG---------ELRHSDVAKLM 138


>gi|71406898|ref|XP_805952.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70869553|gb|EAN84101.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 785

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 118/446 (26%), Positives = 179/446 (40%), Gaps = 80/446 (17%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             +E   +              + F +D  RL    P    R T ++PQ++  IQ I+ +
Sbjct: 222 DEREGQYVTDQSIFEDHARLYERLFFEDMRRLGVRDPDVVSRVTEYVPQVVDFIQKIMDN 281

Query: 143 GHAYEANNEIIFDTSSI----PNYGSF-----------SRRKIDEQKMGTRVPEKYHKKN 187
           G AY   + I FDT++      +Y              +  ++ E +    V     K+N
Sbjct: 282 GFAYRGTSSIFFDTTAFLRAGHDYPKLKPVSESGENDATEAEMAEGEGALTVGVAGEKRN 341

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
             DF LWK S P EP W SPWG GRPGWHIECS M+S  LG   D+H GG DL FPHH+N
Sbjct: 342 ANDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDN 401

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           E AQS       +  N ++H G L+++G KMSKS  NFITI + L+            V+
Sbjct: 402 ECAQSEACHMQHQWINYFLHCGHLHIKGLKMSKSLKNFITIRQALDELDVT-----PRVM 456

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILL----------------SKWPQTSTSKG------ 345
           RL  L  H+ +P++F+ Q + EA+                     W +T    G      
Sbjct: 457 RLLFLANHWGKPMNFSDQSIEEAKERERVLRAFFGSVDIVLRKDNWGETQGLNGHDRRLQ 516

Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
                 + AV  AL N+ +T +A+ ++  L   +                 +        
Sbjct: 517 ETWLTAENAVHGALQNNFDTPAAMDSVMGLVGATNHYLLSGERPSATLVRKVGRYVTRIL 576

Query: 390 HILGI--------EVCKEHLNKNISIAIEKLVQ----ERLILLKMK----KFSSADYIRK 433
            + G+           ++  +  +   ++ L++     R      K         D +R 
Sbjct: 577 QVFGVVEGNDMVGFATQQGSDDRLLTVMDALLRFRDGVRDAAKVEKCTGTFLPLCDAVRD 636

Query: 434 Q-LESKGFILEDYKNPDNGQRMTRWK 458
           + L   G  +ED          T WK
Sbjct: 637 EWLVPAGIRIEDNPAGP-----TTWK 657



 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 14/114 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ N+L   +  F   +   +R Y CGPTVY+ +H+G+AR  + FD+L R++  Y+G
Sbjct: 37  KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMEDYFG 96

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK--DTTRL 114
              V Y  NITDIDDKII+RAR            S +  +  + F++  D  RL
Sbjct: 97  -YQVVYQMNITDIDDKIIKRARI-----------SALLKRFREDFLQGSDMARL 138


>gi|28856175|gb|AAH48039.1| Cars protein [Danio rerio]
          Length = 652

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 113/447 (25%), Positives = 182/447 (40%), Gaps = 85/447 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S++      ++ KD   L  L P    R + ++P+++  ++ I+ +G+ Y
Sbjct: 202 GSQVTENSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGY 261

Query: 147 EANNEIIFDTSSIPNYGSFSRRKI-------------DEQKMGTRVPEKYHKKNPADFIL 193
           E+N  + FDT+   +  + S  K+              E  +         K++  DF L
Sbjct: 262 ESNGSVYFDTAKFDSCPAHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFAL 321

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W+SPWG GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS 
Sbjct: 322 WKASKPGEPSWDSPWGMGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 381

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L           A  +RLA LM
Sbjct: 382 AYFESDYWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALAKH-------TARQLRLAFLM 434

Query: 314 THYREPIDFTVQRLTEA---EILLSKW------------------PQTSTSKGIIDPAVL 352
             +++ +D++   +  A   E  ++++                   +    +  ++    
Sbjct: 435 HSWKDTLDYSNNTMESAIQYERFINEFFLNVKDILRSPTDITGQYEKWEAEEIELNKCFY 494

Query: 353 S-------ALYNDLNTVSAIQALHKLARESTKNHD--------------------LLPIF 385
                   AL ++++T SA++ +  L  +S                         L  + 
Sbjct: 495 DKKTSVHGALCDNIDTRSALEEMRALVGQSNTYMAARRSAKLPPNRMLLQSIALYLTDML 554

Query: 386 NASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLILLKMK---KFSSAD 429
                I G +     +  N             +S+  +     R I  + K        D
Sbjct: 555 KTFGAIEGTDPIGFPVGGNGQSADLESTVMPYLSVLSDFREDVRKIAREKKVTELLQLCD 614

Query: 430 YIRKQ-LESKGFILEDYKNPDNGQRMT 455
            +R   L   G  LED   P    ++ 
Sbjct: 615 QLRDDTLPELGVRLEDRDGPPTSVKLV 641



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 1/99 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+++YN+L R    F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ 
Sbjct: 26  SKLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILKNYF- 84

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
           +  V Y  NITDIDDKII+RARQ +      +       
Sbjct: 85  KYDVFYCMNITDIDDKIIKRARQNYLLEQYREKKPSAAQ 123


>gi|321399071|emb|CBZ08414.1| putative cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|322497350|emb|CBZ32425.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 784

 Score =  314 bits (806), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 131/452 (28%), Positives = 184/452 (40%), Gaps = 82/452 (18%)

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
            D + ER+        I +       K  + F +D  RL    P    R T ++PQ++  
Sbjct: 215 GDLLDERSGHSVSDQQIFEDH---ARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEF 271

Query: 136 IQNIILHGHAYEANNEIIFDTSSI----PNYGSFS-----RRKIDEQKMGTRV---PEKY 183
           +Q II +G AY     + FDT +      +Y             DE   G  V     + 
Sbjct: 272 VQKIIDNGFAYVGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEG 331

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP W SPWG GRPGWHIECS M+S  LG+  DIH GG DL FP
Sbjct: 332 EKRSPNDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFP 391

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HH+NE AQS   +   +  N ++H G L+++G KMSKS  NFITI + L+      R   
Sbjct: 392 HHDNECAQSEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDELGVTAR--- 448

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------D 348
              +RL  L   + +P++F+ Q L EA+           S  I+               D
Sbjct: 449 --TMRLLFLANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRTDNWKATQGANKHD 506

Query: 349 PAVLSA-----------LYNDLNTVSAIQALHKLARESTKN------------HDLLPIF 385
             +LS            L ++ +TV A+Q L  L   + +               +    
Sbjct: 507 RELLSKWVEAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYV 566

Query: 386 NASAHILG-------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKK-------FSS 427
                I G       + + K+      +  IE    LV+ R  +    K           
Sbjct: 567 TKMFRIFGVVEGSDDVGLQKQGSGDGEARFIEVVNTLVRFRDEVRDAAKDHKVVAGFLPL 626

Query: 428 ADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
            D +R + L   G  LED          T WK
Sbjct: 627 CDKVRDEWLVDAGVRLEDNPAGP-----TTWK 653



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 10/113 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G
Sbjct: 36  NGLKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRVMEDYFG 95

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              V Y  NITDIDDKII+RAR         +          +    D  RL 
Sbjct: 96  -YSVIYQMNITDIDDKIIKRARVNKLLDDFKEG---------ELRHGDVARLM 138


>gi|326920114|ref|XP_003206320.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 748

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 115/439 (26%), Positives = 181/439 (41%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F KD   L  L P    R + ++P+++  ++ I+ +G+ Y
Sbjct: 203 GSQVTDNSIFSELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGY 262

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADFIL 193
            +N  + FDT    +    S  K+  + +G +   +               K +P DF L
Sbjct: 263 VSNGSVYFDTVKFASSEKHSYAKLVPEAVGDQKALQEGEGDLSISADRLCEKHSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W+SPWG+GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKSSKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDNWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHTARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  ++++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESAIQYEKFMNEFFLNVKDILRAPTDVTGQFQKWENQEAELNKNFY 495

Query: 348 D--PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------------- 388
           D   A+  AL ++++T S ++ +  L  +S                              
Sbjct: 496 DKKAAIHEALCDNVDTRSVLEEMRSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQML 555

Query: 389 --------AHILGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
                      +G  V     N NI   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIESDDAIGFPVGGSSQNINIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YN+L R    FQ  +   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ 
Sbjct: 27  SRLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYF- 85

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
           +  V Y  NITDIDDKII+R RQ +         S    
Sbjct: 86  KFDVFYCMNITDIDDKIIKRTRQNYLFEQYRKNKSTPAQ 124


>gi|109105037|ref|XP_001096302.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 4 [Macaca
           mulatta]
          Length = 831

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 579 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 638

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + N+   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYLEKRPEAAQ 207


>gi|60302812|ref|NP_001012601.1| cysteinyl-tRNA synthetase, cytoplasmic [Gallus gallus]
 gi|82231219|sp|Q5F408|SYCC_CHICK RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|60098591|emb|CAH65126.1| hypothetical protein RCJMB04_3o5 [Gallus gallus]
          Length = 748

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 115/439 (26%), Positives = 182/439 (41%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F KD   L  L P    R + ++P+++  ++ I+ +G+ Y
Sbjct: 203 GSQVTDNSIFSELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGY 262

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADFIL 193
            +N  + FDT    +    S  K+  + +G +   +               K +P DF L
Sbjct: 263 VSNGSVYFDTVKFGSSEKHSYAKLVPEAVGDQKALQEGEGDLSISADRLCEKHSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W+SPWG+GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKSSKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDNWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------QKHTARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  ++++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESAIQYEKFMNEFFLNVKDILRAPTDVTGQFQKWENQEAELNKNFY 495

Query: 348 D--PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------------- 388
           D   A+  AL ++++T S ++ +  L  +S                              
Sbjct: 496 DKKAAIHEALCDNVDTRSVLEEMRSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQML 555

Query: 389 --------AHILGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
                      +G  V   + N NI   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIESDDAIGFPVGGNNQNINIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YN+L R    FQ  +   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ 
Sbjct: 27  SRLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFDILRRILRDYF- 85

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
           +  V Y  NITDIDDKII+R RQ +         S    
Sbjct: 86  KFDVFYCMNITDIDDKIIKRTRQNYLFEQYRKNKSTPAQ 124


>gi|109105041|ref|XP_001096069.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 2 [Macaca
           mulatta]
          Length = 738

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 193 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 486 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 545

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + N+   +   +Q         R I  + K       +D
Sbjct: 546 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 605

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 606 ALRDDILPELGVRFEDHEG 624



 Score =  118 bits (297), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
               F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NIT
Sbjct: 28  TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNIT 86

Query: 74  DIDDKIIERARQEHPSIPINDAISIITS 101
           DIDDKII+RARQ H      +       
Sbjct: 87  DIDDKIIKRARQNHLFEQYLEKRPEAAQ 114


>gi|157821465|ref|NP_001099789.1| cysteinyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|149061784|gb|EDM12207.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 748

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKW--PQTSTSKGII 347
             +++ +D++   +  A                             KW   +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARE--------------------STKNHDLLPIF 385
           D   AV  AL ++++T + ++ +  L  +                          L  + 
Sbjct: 496 DKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHML 555

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEENPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII RARQ +      +       
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNYLFEQYREQKPSAAQ 124


>gi|195028283|ref|XP_001987006.1| GH21680 [Drosophila grimshawi]
 gi|193903006|gb|EDW01873.1| GH21680 [Drosophila grimshawi]
          Length = 743

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/446 (27%), Positives = 177/446 (39%), Gaps = 90/446 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N     +      +F  D   L  L P    R + ++PQ++  IQ II +  AY
Sbjct: 196 GAQVKDNSVFEALPRYWEDKFHNDMKSLNILPPDVLTRVSEYVPQIVEFIQRIIDNKLAY 255

Query: 147 EANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
           EAN  + FD +                 YG     +  E  +         K++P DF L
Sbjct: 256 EANGSVYFDVNGFDKREKHHYAKLVPEAYGDTQSLQEGEGDLSVTEERLSEKRSPNDFAL 315

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWGRGRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 316 WKTSKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSE 375

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NFITI E L           A  +RLA L+
Sbjct: 376 AAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFITIQEALTKH-------SATQLRLAFLL 428

Query: 314 THYREPIDFTVQRLTEA---EILLSKW---------------------------PQTSTS 343
             +++ +D++   +  A   E  L+++                               T 
Sbjct: 429 HSWKDTLDYSENTMEMATQFEKFLNEFFLNVKDLTRQVLSGEPIKQFSNWTPLEASLQTK 488

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
            G     + +AL ++++T SA+  + +L   +                  +        H
Sbjct: 489 FGETQAQIHAALCDNIDTRSALDYVRELVSTTNIYIRDNKARLNNLLLRKIATYITDLLH 548

Query: 391 ILG-IEVCKEHL----------NKNISIAIEKLVQ------------ERLILLKMKKF-- 425
           I G I   +  +          N   S  +E +V              R     +K F  
Sbjct: 549 IFGAINGARGGIGFPLSGSSDSNSGESTDLESIVMPYVQSAAEFRNLVREQAKALKAFDI 608

Query: 426 -SSADYIRKQ-LESKGFILEDYKNPD 449
               D +R   L + G  LED  +  
Sbjct: 609 LKLCDDLRDDVLPNLGVRLEDKDDGT 634



 Score =  144 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 45/117 (38%), Positives = 73/117 (62%), Gaps = 2/117 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++YN+L R+   F  ++ +N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 18  RPQLRLYNSLTRQKETFVPLEGNNVKWYSCGPTVYDASHMGHARSYISFDILRRILANYF 77

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII-TSKNTQQFVKDTTRLACL 117
           G   + YV NITDIDDKII+RARQ H        ++++   +   +  +  T+L   
Sbjct: 78  GYN-IQYVMNITDIDDKIIKRARQYHLYEQYAKEVTLLPLEQFLNEQKEVLTQLQVK 133


>gi|75075917|sp|Q4R550|SYCC_MACFA RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|67970866|dbj|BAE01775.1| unnamed protein product [Macaca fascicularis]
          Length = 748

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 113/436 (25%), Positives = 176/436 (40%), Gaps = 85/436 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            ++  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSDGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTITGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + N+   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 615

Query: 430 YIRKQ-LESKGFILED 444
            +R   L   G   ED
Sbjct: 616 ALRDDILPELGVRFED 631



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYLEKRPEAAQ 124


>gi|109105039|ref|XP_001096538.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 5 [Macaca
           mulatta]
          Length = 748

 Score =  314 bits (804), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + N+   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYLEKRPEAAQ 124


>gi|149061783|gb|EDM12206.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_a [Rattus
           norvegicus]
          Length = 831

 Score =  313 bits (803), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKW--PQTSTSKGII 347
             +++ +D++   +  A                             KW   +   +K   
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARE--------------------STKNHDLLPIF 385
           D   AV  AL ++++T + ++ +  L  +                          L  + 
Sbjct: 579 DKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIEEENPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII RARQ +      +       
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYREQKPSAAQ 207


>gi|195122821|ref|XP_002005909.1| GI18835 [Drosophila mojavensis]
 gi|193910977|gb|EDW09844.1| GI18835 [Drosophila mojavensis]
          Length = 740

 Score =  313 bits (802), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 124/445 (27%), Positives = 182/445 (40%), Gaps = 88/445 (19%)

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           ++   +  N     +      +F  D   L  L P    R + ++PQ++  IQ II +G 
Sbjct: 193 KQGAHVNDNSVFEALPRFWEDKFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGL 252

Query: 145 AYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
           AYEAN  + FD +                 YG  +  +  E  +         K++  DF
Sbjct: 253 AYEANGSVYFDVNGFDKRDKHHYAKLVPEAYGDTASLQEGEGDLSVTEDRLSEKRSANDF 312

Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
            LWK S   EP W+SPWGRGRPGWHIECSAM+S   G +FDIH GG+DL FPHH+NE+AQ
Sbjct: 313 ALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQ 372

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA 
Sbjct: 373 SEAAFGESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAF 425

Query: 312 LMTHYREPIDFTVQRLTEA---EILLSKW---------------------------PQTS 341
           L+  +++ +D++   +  A   E  L+++                               
Sbjct: 426 LLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRQVLSGEPMQQFSEWTAVEAALQ 485

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------------HDL 381
                    V +AL ++++T SA+  + +L   +                        DL
Sbjct: 486 AKFNEAQAQVHAALCDNIDTRSALDCVRELVSTTNVYIRDNKSRLNSLLLRKIAIYVTDL 545

Query: 382 LPIFNASAHIL-GIEVCKEHLNK-----NISIAIEKLVQ--------ERLILLKMKKF-- 425
           L IF A A    GI    +  +      +    +   VQ         R     +K F  
Sbjct: 546 LHIFGAIAGPRGGIGFPLKGADSDSATNDHEAVVMPYVQSVAEFRNLVREQAKALKAFDI 605

Query: 426 -SSADYIRKQ-LESKGFILEDYKNP 448
               D +R   L + G  LED  N 
Sbjct: 606 LKLCDDLRDDVLPNLGVRLEDKDNG 630



 Score =  144 bits (365), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 47/98 (47%), Positives = 67/98 (68%), Gaps = 1/98 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++K+YN+L R+  EF  +D +N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPQLKLYNSLTRQKEEFVPLDGNNVKWYSCGPTVYDASHMGHARSYISFDILRRILADYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           G   + YV NITDIDDKII+RARQ H       A + +
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQYHLFEQYATAAAQL 113


>gi|187468988|gb|AAI66707.1| Cars protein [Rattus norvegicus]
          Length = 655

 Score =  312 bits (801), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKW--PQTSTSKGII 347
             +++ +D++   +  A                             KW   +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARE--------------------STKNHDLLPIF 385
           D   AV  AL ++++T + ++ +  L  +                          L  + 
Sbjct: 496 DKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHML 555

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEENPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII RARQ +      +       
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNYLFEQYREQKPSAAQ 124


>gi|157074020|ref|NP_001096719.1| cysteinyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|133777443|gb|AAI14706.1| CARS protein [Bos taurus]
 gi|296471434|gb|DAA13549.1| cysteinyl-tRNA synthetase [Bos taurus]
          Length = 832

 Score =  312 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 117/443 (26%), Positives = 175/443 (39%), Gaps = 85/443 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                  +  N   S +      +F KD   L  L P    R + ++P+++  +Q I+ +
Sbjct: 283 DSMHGSEVTDNSIFSELPKFWEAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVQKIVDN 342

Query: 143 GHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQKMGTRVPEK--------YHKKNPA 189
           G+ Y +N  + FDT    N     YG      + +QK                  K++P 
Sbjct: 343 GYGYASNGSVYFDTVKFANTEGHSYGKLVPEAVGDQKALHEGEGDLSVSAERLSEKRSPN 402

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+
Sbjct: 403 DFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNEL 462

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS      +     ++H G L + G KMSKS  NFITI + L       +   A  +RL
Sbjct: 463 AQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRL 515

Query: 310 AMLMTHYREPIDFTVQRLTEA------------------------EILLSKWPQTSTSKG 345
           A LM  +++ +D++   +  A                             KW    T   
Sbjct: 516 AFLMHSWKDTLDYSANTMESALQYERLLNEFFLNVKDLLRAPVEVAAQFEKWEDEETELN 575

Query: 346 II----DPAVLSALYNDLNTVSAIQALHKLAREST--------------------KNHDL 381
                   AV  AL ++++T + ++ +  L  +                        H L
Sbjct: 576 KSFYKKKAAVHQALCDNIDTRTVLEEMRALVGQCNLYMAARKAARRRPHRVLLESIAHYL 635

Query: 382 LPIFNASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS-- 426
             +      I     LG  +     + N+   +   +Q         R I  + +     
Sbjct: 636 THMLKIFGAIEEESSLGFPIGGAGTSLNLESTVMPYLQVLSEFREGVRRIAREHRVPEVL 695

Query: 427 -SADYIRKQ-LESKGFILEDYKN 447
             +D +R   L   G  LED++ 
Sbjct: 696 QLSDALRDNVLPELGVRLEDHEG 718



 Score =  136 bits (344), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 6/110 (5%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R+   F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 112 QLRLYNSLTRRKDVFVPQDGRRVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-K 170

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
             V Y  NITDIDDKII+RARQ        +     T     Q ++D   
Sbjct: 171 FDVFYCMNITDIDDKIIKRARQNFLLERYRE-----TQPQAAQLLEDVRA 215


>gi|195382430|ref|XP_002049933.1| GJ21863 [Drosophila virilis]
 gi|194144730|gb|EDW61126.1| GJ21863 [Drosophila virilis]
          Length = 741

 Score =  312 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 124/444 (27%), Positives = 181/444 (40%), Gaps = 89/444 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N     +       F  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAHVNDNTVFEALPRYWEDHFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGLAY 254

Query: 147 EANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
           EAN  + FD +                 YG  +  +  E  +         K++P DF L
Sbjct: 255 EANGSVYFDVNGFDKREKHHYAKLVPEAYGDTTSLQEGEGDLSVTADRLSEKRSPNDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWG GRPGWHIECSAM+S   G +FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGHGRPGWHIECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       R   A  +RLA L+
Sbjct: 375 AAFGESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------RKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA---EILLSKW---------------------------PQTSTS 343
             +++ +D++   +  A   E  L+++                                 
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSGKPMQQFSEWTAVEAALQAK 487

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------------HDLLP 383
                  V +AL ++++T SA+ ++ +L   +                        DLL 
Sbjct: 488 FNEAQGQVHAALCDNIDTRSALDSVRELVSTTNIYIRDNKTRLNHLLLRKVATYITDLLH 547

Query: 384 IFNASAH--------ILGIEVCKEHLNKNISIAI-------EKLVQERLILLKMKKF--- 425
           IF A +         + G E     +N + S+ +       E     R     +K F   
Sbjct: 548 IFGAISGPRGGIGFPLTGTESNNSEINDHESVVMPYVQSVAEFRNFVREQAKVLKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILEDYKNP 448
              D +R   L + G  LED    
Sbjct: 608 KLCDDLRDDVLPNLGVRLEDKDGG 631



 Score =  144 bits (363), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 44/98 (44%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++++YN+L R+  EF  +  +N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPQLRLYNSLTRQKEEFVPLSGNNVKWYSCGPTVYDASHMGHARSYISFDILRRILANYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           G   + YV NITDIDDKII+RARQ H           +
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQYHLYEQYASGAEQL 113


>gi|169646833|ref|NP_001112372.1| cysteinyl-tRNA synthetase, cytoplasmic [Danio rerio]
          Length = 824

 Score =  312 bits (801), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 112/436 (25%), Positives = 179/436 (41%), Gaps = 85/436 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S++      ++ KD   L  L P    R + ++P+++  ++ I+ +G+ Y
Sbjct: 281 GSQVTENSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGY 340

Query: 147 EANNEIIFDTSSIPNYGSFSRRKI-------------DEQKMGTRVPEKYHKKNPADFIL 193
           E+N  + FDT+   +  + S  K+              E  +         K++  DF L
Sbjct: 341 ESNGSVYFDTAKFDSCPAHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFAL 400

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W+SPWG GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS 
Sbjct: 401 WKASKPGEPSWDSPWGMGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 460

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L           A  +RLA LM
Sbjct: 461 AYFENDYWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALAKH-------TARQLRLAFLM 513

Query: 314 THYREPIDFTVQRLTEA---EILLSKW------------------PQTSTSKGIIDPAVL 352
             +++ +D++   +  A   E  ++++                   +    +  ++    
Sbjct: 514 HSWKDTLDYSNNTMESAIQYERFINEFFLNVKDILRSPTDITGQYEKWEAEEIELNKCFY 573

Query: 353 S-------ALYNDLNTVSAIQALHKLARESTKNHD--------------------LLPIF 385
                   AL ++++T SA++ +  L  +S                         L  + 
Sbjct: 574 DKKTSVHGALCDNIDTRSALEEMRALVGQSNTYMAARRSAKLPPNRMLLQSIALYLTDML 633

Query: 386 NASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLILLKMK---KFSSAD 429
                I G +     +  N             +S+  +     R I  + K        D
Sbjct: 634 KTFGAIEGTDPIGFPVGGNGQSADLESTVMPYLSVLSDFREDVRKIAREKKVTELLQLCD 693

Query: 430 YIRKQ-LESKGFILED 444
            +R   L   G  LED
Sbjct: 694 QLRDDTLPELGVRLED 709



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 41/99 (41%), Positives = 58/99 (58%), Gaps = 1/99 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+++YN+L R    F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ 
Sbjct: 105 SKLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILKNYF- 163

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
           +  V Y  NITDIDDKII+RARQ +      +       
Sbjct: 164 KYDVFYCMNITDIDDKIIKRARQNYLLEQYREKKPSAAQ 202


>gi|58332582|ref|NP_001011365.1| cysteinyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana)
           tropicalis]
 gi|82232096|sp|Q5M7N8|SYCC_XENTR RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|56788842|gb|AAH88531.1| cysteinyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
          Length = 747

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 114/443 (25%), Positives = 179/443 (40%), Gaps = 85/443 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             +    I  N   S +      ++ +D   L  L P    R + ++P+++  +Q I+ +
Sbjct: 198 DEKHGAQITDNSIFSQLPKHWESEYHRDMEALNVLPPDVLTRVSEYVPEIVAFVQRIVDN 257

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKI-------------DEQKMGTRVPEKYHKKNPA 189
           G+ Y +N  + F T+           K+              E  +         K++P 
Sbjct: 258 GYGYVSNGSVYFSTAKFHASEKHYYAKLVPEAVGDQKALQEGEGDLSISADRLSEKQSPN 317

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S P EP WESPWG+GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+
Sbjct: 318 DFALWKASKPGEPSWESPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNEL 377

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS      +     ++H G L + G KMSKS  NFITI + L+          A  +RL
Sbjct: 378 AQSEAYFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALQKN-------TARQLRL 430

Query: 310 AMLMTHYREPIDFTVQRLTEA-------------EILLSKWPQTSTSKGIIDP------- 349
           A LM  +++ +D++   +  A                L + P   T + +          
Sbjct: 431 AFLMHAWKDTLDYSSNTMESAVQYEKFMNEFFLNVKDLLRAPTDVTGQFVKWEVPELELN 490

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIF 385
                   AV  AL ++++T + ++ +  L  +                      +    
Sbjct: 491 SCFYSKKAAVHEALCDNIDTRTVMEEMRSLVSQCNSYIASRKAAKQPPNRLLLRSVSSYL 550

Query: 386 NASAHILGIEVCKE-------------HLNKNISIAIEKLVQ----ERLILLKMK---KF 425
            A   + G    +E             +L   +   ++ L Q     R I  + K     
Sbjct: 551 TAMLKVFGAIEGEEVIGFPIGGSDNSMNLESTVMPYLQVLSQFREGVRQIARQHKVTEVL 610

Query: 426 SSADYIRKQ-LESKGFILEDYKN 447
             +D +R   L   G  LED++ 
Sbjct: 611 QLSDLLRDDVLPELGVRLEDHEG 633



 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 43/93 (46%), Positives = 59/93 (63%), Gaps = 1/93 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L R    F   D + +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+
Sbjct: 25  QPGLRLYNSLTRSKELFVPQDGNKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF 84

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
            +  V Y  NITDIDDKII+RARQ H      +
Sbjct: 85  -KYDVFYCMNITDIDDKIIKRARQRHLFQQYRE 116


>gi|26332072|dbj|BAC29766.1| unnamed protein product [Mus musculus]
 gi|74225237|dbj|BAE31556.1| unnamed protein product [Mus musculus]
          Length = 748

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 496 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 555

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117


>gi|148686274|gb|EDL18221.1| cysteinyl-tRNA synthetase, isoform CRA_c [Mus musculus]
          Length = 748

 Score =  312 bits (800), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 496 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 555

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117


>gi|270000778|gb|EEZ97225.1| hypothetical protein TcasGA2_TC011023 [Tribolium castaneum]
          Length = 730

 Score =  312 bits (800), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 116/444 (26%), Positives = 186/444 (41%), Gaps = 82/444 (18%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
             +I  N   + +     Q+F KD   L  L P    R + +IP++I  I  II +G  Y
Sbjct: 193 GATITDNAIFTSLPQHWEQEFHKDMEALNILKPHVLTRVSEYIPEIIGYISRIISNGFGY 252

Query: 147 EANNEIIFDTSSIPN-----YGSF---SRRKIDEQKMG----TRVPEKYHKKNPADFILW 194
           EAN  + FD ++        Y      +    +  + G    T   ++  K +P DF LW
Sbjct: 253 EANGSVYFDVAAFDKQPNHYYAKLVPEAYGDTNSLQEGEGDLTTADQRNEKHSPNDFALW 312

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
           KRS P EP W+SPWG+GRPGWHIECSAM+S   G   DIH GG+DL FPHH+NEIAQS  
Sbjct: 313 KRSKPGEPAWDSPWGKGRPGWHIECSAMASTIFGDTLDIHTGGVDLKFPHHDNEIAQSEA 372

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                +    ++H+G L + G KMSKS  NF++I + L         + A  +R A L+ 
Sbjct: 373 HFGASEWVKYFLHSGHLTIAGCKMSKSLKNFVSIQDALA-------KYTARQLRFAFLLH 425

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---------------------- 352
            +R+ +D++   +  A      + +   +   +    L                      
Sbjct: 426 AWRDTLDYSQNTMEVALQYEKNFNEFFLNVKDLTRNFLKKPTLVGHYVKWERQEMELNGH 485

Query: 353 ---------SALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHI 391
                    +AL ++++T +++++L  L   S               HD+         I
Sbjct: 486 FLQAKDNVHAALCDNIDTRTSLESLRDLVTASNLYIRDKNPPNCLLLHDIAVYITKMLSI 545

Query: 392 LG-----------IEVCKEHLNKN-----ISIAIEKLVQERLILLKMKK---FSSADYIR 432
            G           +    E  +++     + I  +   + R     +K        D +R
Sbjct: 546 FGAISEPSRVGFPVTSGNESNSEDKILPYLEILADFRDKIRTSARTLKATEILQECDKLR 605

Query: 433 KQ-LESKGFILEDYKNPDNGQRMT 455
            + L + G  LED +   +  ++ 
Sbjct: 606 DETLPNVGVRLEDREGAPSAVKIV 629



 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 1/88 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R+   F+ I    +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFDILRRVLADYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI 92
              +V NITDIDDKII+RARQ +     
Sbjct: 80  IF-FVMNITDIDDKIIKRARQNYLFERY 106


>gi|297687910|ref|XP_002821442.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 5
           [Pongo abelii]
          Length = 739

 Score =  312 bits (800), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 216 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 275

Query: 147 EANNEIIFDTSSI-----PNYGSF--------SRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +N  + FDT+        +YG          +  +  E  +         K++P DF L
Sbjct: 276 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 335

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 336 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 395

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 396 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 448

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 449 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 508

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 509 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 568

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 569 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 628

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 629 ALRDDILPELGVRFEDHEG 647



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 41  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 99

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 100 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 137


>gi|300741532|ref|ZP_07071553.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia dentocariosa M567]
 gi|300380717|gb|EFJ77279.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia dentocariosa M567]
          Length = 438

 Score =  312 bits (800), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 115/403 (28%), Positives = 173/403 (42%), Gaps = 53/403 (13%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T    + + Q  +P +  +YVCG T YD  H+G+A   + FDVL R  R       
Sbjct: 20  QIFDTSTGTVVQLQ--EPQHAGLYVCGITPYDATHMGHASTYVAFDVLNRAWRDAG--VN 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA               +  + T+ F  D   L  L P H    
Sbjct: 76  VTYVQNVTDVDDPLLERA------TATGVDWQELAEEQTELFRTDMEALHVLPPEHYVGV 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIP-------NY---- 162
              I  +  +I++++    AY              + +I  D  ++         Y    
Sbjct: 130 VESIQWLFPVIEDLVERSLAYRVAGYVDEKGVQHPDGDIYLDLKAVQALPQNEDGYSWTP 189

Query: 163 GSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHI 217
           G  S    DE           PE+  K++P D +LW+     EP W+    G GRPGWHI
Sbjct: 190 GEVSHMSRDEMLDIFSERGGDPERSGKRDPLDPLLWRIKREGEPSWDAGSLGEGRPGWHI 249

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           EC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G K
Sbjct: 250 ECTMIARKFIDGPLTVQAGGSDLKFPHHDLGAGHSWAVSN-RPHALHYAHTGMVGLDGHK 308

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN + +++L               IRL ++  HYRE   +T + L +A+  L  +
Sbjct: 309 MSKSRGNLVLVSKLRAA------GVDPNTIRLTIMDHHYREDWFWTDEDLKKAQARLDLY 362

Query: 338 PQTSTSKGIID--------PAVLSALYNDLNTVSAIQALHKLA 372
            Q   S    D          V   L +DL T  A+ AL   A
Sbjct: 363 RQAVESANGTDSSAAEQALEKVREYLADDLKTSGALMALDAWA 405


>gi|297687908|ref|XP_002821441.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 4
           [Pongo abelii]
          Length = 738

 Score =  312 bits (799), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 193 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252

Query: 147 EANNEIIFDTSSI-----PNYGSF--------SRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +N  + FDT+        +YG          +  +  E  +         K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 312

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 486 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 545

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 546 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 605

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 606 ALRDDILPELGVRFEDHEG 624



 Score =  119 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
               F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NIT
Sbjct: 28  TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNIT 86

Query: 74  DIDDKIIERARQEHPSIPINDAISIITS 101
           DIDDKII+RARQ H      +       
Sbjct: 87  DIDDKIIKRARQNHLFEQYREKRPEAAQ 114


>gi|332835585|ref|XP_001155951.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 4 [Pan
           troglodytes]
          Length = 739

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 216 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 275

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 276 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 335

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 336 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 395

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 396 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 448

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 449 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 508

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 509 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 568

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 569 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 628

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 629 ALRDDILPELGVRFEDHEG 647



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 41  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 99

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 100 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 137


>gi|297687902|ref|XP_002821438.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Pongo abelii]
          Length = 831

 Score =  312 bits (799), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSF--------SRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +N  + FDT+        +YG          +  +  E  +         K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 207


>gi|301791662|ref|XP_002930799.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Ailuropoda melanoleuca]
          Length = 832

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 287 GSEVTDNSIFSQLPKFWEEEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 346

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 347 ASNGSVYFDTAKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 406

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 407 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 466

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 467 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 519

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWP----QTSTSKG 345
             +++ +D++   +  A                             KW     + + S  
Sbjct: 520 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGRFEKWEDEELELNESFY 579

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST--------------------KNHDLLPIF 385
               AV  AL ++++T + ++ +  L                             L  + 
Sbjct: 580 DKKAAVHEALCDNVDTRTVLEEMRALVSRCNLYMAARKAARRRPNRALLESIALYLTHML 639

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 640 KIFGAIEEESSLGFPVRGPGTSLDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 699

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 700 ALRDDILPELGVRFEDHEG 718



 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 112 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLRGYFGY 171

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITD+DDKII RARQ +      +
Sbjct: 172 D-VLYCMNITDVDDKIIRRARQNYLFEQYRE 201


>gi|301791660|ref|XP_002930798.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Ailuropoda melanoleuca]
          Length = 831

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSQLPKFWEEEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWP----QTSTSKG 345
             +++ +D++   +  A                             KW     + + S  
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGRFEKWEDEELELNESFY 578

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST--------------------KNHDLLPIF 385
               AV  AL ++++T + ++ +  L                             L  + 
Sbjct: 579 DKKAAVHEALCDNVDTRTVLEEMRALVSRCNLYMAARKAARRRPNRALLESIALYLTHML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIEEESSLGFPVRGPGTSLDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 111 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLRGYFGY 170

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITD+DDKII RARQ +      +
Sbjct: 171 D-VLYCMNITDVDDKIIRRARQNYLFEQYRE 200


>gi|194755026|ref|XP_001959793.1| GF11862 [Drosophila ananassae]
 gi|190621091|gb|EDV36615.1| GF11862 [Drosophila ananassae]
          Length = 741

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 118/449 (26%), Positives = 173/449 (38%), Gaps = 89/449 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             Q+   I  N     +      QF  D   L  L P    R + ++PQ+I  IQ II +
Sbjct: 191 DAQKGAGINDNAVFEALPQYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIITFIQKIIDN 250

Query: 143 GHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
           G AY AN+ + FD +                 YG     +  E  +         K++  
Sbjct: 251 GLAYAANSSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSAN 310

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+
Sbjct: 311 DFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNEL 370

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS  A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RL
Sbjct: 371 AQSEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRL 423

Query: 310 AMLMTHYREPIDFTVQRLTEA--------------------------EILLSKWPQTSTS 343
           A L+  +++ +D++   +  A                                W +   +
Sbjct: 424 AFLLHSWKDTLDYSENTMEMATQFEKFLNEFFLNVKDLTRHVLSEEPRRQFDTWTEVEAA 483

Query: 344 K----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFN 386
                      V +AL ++++T SA+  + +L   S                 ++     
Sbjct: 484 LQKKFSTAQEQVYAALCDNIDTRSALDIVRELVSASNVYIRDNKSRLNSLLLRNVATYIT 543

Query: 387 ASAHILGIEV--------------CKEHLNKNISIAIEKLVQ--------ERLILLKMKK 424
              H+ G                   +    ++   +   VQ         R     +K 
Sbjct: 544 DLLHVFGAIAGPRGGIGFPISGGSGSQAAGADLETTVLPYVQSMAEFRNLVREQAKALKA 603

Query: 425 F---SSADYIRKQ-LESKGFILEDYKNPD 449
           F      D +R   L + G  LED     
Sbjct: 604 FDILKLCDDLRDNVLPNLGVRLEDKDGGQ 632



 Score =  143 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 46/91 (50%), Positives = 63/91 (69%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  EF  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEEFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILANYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII+RARQ H     
Sbjct: 77  G-YHIHYVMNITDIDDKIIKRARQNHLFEQY 106


>gi|189241753|ref|XP_968189.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
           castaneum]
          Length = 734

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 118/448 (26%), Positives = 185/448 (41%), Gaps = 86/448 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
             +I  N   + +     Q+F KD   L  L P    R + +IP++I  I  II +G  Y
Sbjct: 193 GATITDNAIFTSLPQHWEQEFHKDMEALNILKPHVLTRVSEYIPEIIGYISRIISNGFGY 252

Query: 147 EANNEIIFDTSSIPN-----YGSF---SRRKIDEQKMG----TRVPEKYHKKNPADFILW 194
           EAN  + FD ++        Y      +    +  + G    T   ++  K +P DF LW
Sbjct: 253 EANGSVYFDVAAFDKQPNHYYAKLVPEAYGDTNSLQEGEGDLTTADQRNEKHSPNDFALW 312

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
           KRS P EP W+SPWG+GRPGWHIECSAM+S   G   DIH GG+DL FPHH+NEIAQS  
Sbjct: 313 KRSKPGEPAWDSPWGKGRPGWHIECSAMASTIFGDTLDIHTGGVDLKFPHHDNEIAQSEA 372

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                +    ++H+G L + G KMSKS  NF++I + L         + A  +R A L+ 
Sbjct: 373 HFGASEWVKYFLHSGHLTIAGCKMSKSLKNFVSIQDALA-------KYTARQLRFAFLLH 425

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---------------------- 352
            +R+ +D++   +  A      + +   +   +    L                      
Sbjct: 426 AWRDTLDYSQNTMEVALQYEKNFNEFFLNVKDLTRNFLKKPTLVGHYVKWERQEMELNGH 485

Query: 353 ---------SALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHI 391
                    +AL ++++T +++++L  L   S               HD+         I
Sbjct: 486 FLQAKDNVHAALCDNIDTRTSLESLRDLVTASNLYIRDKNPPNCLLLHDIAVYITKMLSI 545

Query: 392 LGI--------EVCKEHLNKNISIAIEKLV------------QERLILLKMKK---FSSA 428
            G                  N+SI+ E  +            + R     +K        
Sbjct: 546 FGAISEPSRVGFPVTSGNESNVSISHEDKILPYLEILADFRDKIRTSARTLKATEILQEC 605

Query: 429 DYIRKQ-LESKGFILEDYKNPDNGQRMT 455
           D +R + L + G  LED +   +  ++ 
Sbjct: 606 DKLRDETLPNVGVRLEDREGAPSAVKIV 633



 Score =  136 bits (342), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 1/88 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R+   F+ I    +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFDILRRVLADYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI 92
              +V NITDIDDKII+RARQ +     
Sbjct: 80  IF-FVMNITDIDDKIIKRARQNYLFERY 106


>gi|260948980|ref|XP_002618787.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
 gi|238848659|gb|EEQ38123.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
          Length = 762

 Score =  312 bits (799), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 119/435 (27%), Positives = 185/435 (42%), Gaps = 91/435 (20%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTS 157
           + +     F +D  +L  L PT   R + ++P++I  +  II +G AY  A+  + FDT+
Sbjct: 227 LPAYWENSFNEDMAKLNVLPPTVTTRVSEYVPEIIDFVDKIISNGFAYVTADGSVYFDTA 286

Query: 158 SI-----PNYGSF------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
                   +Y         S   I++ +    V E   KKNPADF LWK S P EP W+S
Sbjct: 287 KFENDPNHDYAKLQPWNKGSMSLINDGEGSLSVSESIIKKNPADFSLWKASKPGEPAWDS 346

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
            WG GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N ++
Sbjct: 347 KWGPGRPGWHIECSVMASDILGSTIDIHSGGIDLCFPHHDNELAQSEAYFDNKQWINYFM 406

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           HNG L+++G+KMSKS  NFITI E L       +++ +  +RL     ++ +PIDF    
Sbjct: 407 HNGHLHIQGQKMSKSLKNFITIEEAL-------QNYTSRQLRLIFAFGNWDKPIDFKDSL 459

Query: 327 LTEAEI---LLSKWPQTSTSKG--------------------------IIDPAVLS---A 354
           + E +     LSK+  T  +                             ++ A      A
Sbjct: 460 VHEVKAYESSLSKFFTTVRALNTDYKHSVSSGQAISKKLSSAERSLLSDLETAQKEAHLA 519

Query: 355 LYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASAHILGIEVCK 398
             ++L++   ++ +  L  ++                     +         ILG E   
Sbjct: 520 FCDNLSSPQVLRVISDLVSKTNTYIQSTVVGQNELRIEPVIAITKWIVKILDILGFEARS 579

Query: 399 EHL----------------NKNISIAIEKLVQERLILL-------KMKKF-SSADYIRKQ 434
           + L                       ++ L Q R  +        +  +F  ++D +R +
Sbjct: 580 DRLGWVDSVSGESDTGASKEDVAMPYVKSLSQFRDTVRDLAISKAESSEFLKASDALRGE 639

Query: 435 LESKGFILEDYKNPD 449
           L   G  L+D     
Sbjct: 640 LIELGISLDDRPTGG 654



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 1/87 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYN+L R   +F     + I  Y CGPTVY++AH+G+AR  +  D+  R+L+ Y+G  
Sbjct: 31  LKIYNSLTRAKEDFVPQKFNYITWYCCGPTVYNYAHMGHARNYVCSDICRRILQDYFGYN 90

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIP 91
            + +V+N+TDIDDKII  ARQ++    
Sbjct: 91  -INFVQNVTDIDDKIIISARQQYLFEQ 116


>gi|148747198|ref|NP_038770.3| cysteinyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|47117033|sp|Q9ER72|SYCC_MOUSE RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|11191806|emb|CAC16403.1| CysRS protein [Mus musculus]
 gi|32493323|gb|AAH54717.1| Cysteinyl-tRNA synthetase [Mus musculus]
 gi|37748375|gb|AAH58954.1| Cysteinyl-tRNA synthetase [Mus musculus]
          Length = 831

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200


>gi|11191800|emb|CAC16398.1| Cysteinyl-tRNA-synthetase [Mus musculus domesticus]
 gi|148686272|gb|EDL18219.1| cysteinyl-tRNA synthetase, isoform CRA_a [Mus musculus]
          Length = 831

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200


>gi|26346422|dbj|BAC36862.1| unnamed protein product [Mus musculus]
          Length = 649

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 496 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 555

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 28  RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 87  YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117


>gi|114635640|ref|XP_001155891.1| PREDICTED: cysteinyl-tRNA synthetase isoform 3 [Pan troglodytes]
 gi|332835583|ref|XP_001156119.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 6 [Pan
           troglodytes]
          Length = 738

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 193 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 486 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 545

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 546 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 605

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 606 ALRDDILPELGVRFEDHEG 624



 Score =  119 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
               F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NIT
Sbjct: 28  TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNIT 86

Query: 74  DIDDKIIERARQEHPSIPINDAISIITS 101
           DIDDKII+RARQ H      +       
Sbjct: 87  DIDDKIIKRARQNHLFEQYREKRPEAAQ 114


>gi|297687904|ref|XP_002821439.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Pongo abelii]
 gi|297687906|ref|XP_002821440.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 3
           [Pongo abelii]
          Length = 748

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSF--------SRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +N  + FDT+        +YG          +  +  E  +         K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|297267201|ref|XP_002799492.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
          Length = 662

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 139 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 432 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 491

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + N+   +   +Q         R I  + K       +D
Sbjct: 492 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 551

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 552 ALRDDILPELGVRFEDHEG 570



 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           +G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+RARQ H      +      
Sbjct: 1   MGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIKRARQNHLFEQYLEKRPEAA 59

Query: 101 S 101
            
Sbjct: 60  Q 60


>gi|20988543|gb|AAH30473.1| Cars protein [Mus musculus]
          Length = 671

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 126 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 185

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 186 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 245

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 246 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 305

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 306 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 358

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 359 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 418

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 419 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 478

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 479 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 538

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 539 ALRDDILPELGVRFEDHEG 557



 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/37 (48%), Positives = 21/37 (56%)

Query: 58 RYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
          R  Y +  V Y  NITDIDDKII RARQ +      +
Sbjct: 4  RRDYFQYDVFYCMNITDIDDKIIRRARQNYLFEQYRE 40


>gi|332835581|ref|XP_003312912.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 831

 Score =  311 bits (798), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 638

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 207


>gi|114635636|ref|XP_001156397.1| PREDICTED: cysteinyl-tRNA synthetase isoform 8 [Pan troglodytes]
 gi|332835579|ref|XP_001155829.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 2 [Pan
           troglodytes]
          Length = 748

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|194383970|dbj|BAG59343.1| unnamed protein product [Homo sapiens]
          Length = 739

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 216 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 275

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 276 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 335

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 336 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 395

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 396 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 448

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 449 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 508

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 509 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 568

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 569 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 628

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 629 ALRDNILPELGVRFEDHEG 647



 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 41  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 99

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 100 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 137


>gi|281351477|gb|EFB27061.1| hypothetical protein PANDA_021387 [Ailuropoda melanoleuca]
          Length = 823

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 114/439 (25%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 278 GSEVTDNSIFSQLPKFWEEEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 337

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 338 ASNGSVYFDTAKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 397

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 398 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 457

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 458 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 510

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWP----QTSTSKG 345
             +++ +D++   +  A                             KW     + + S  
Sbjct: 511 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGRFEKWEDEELELNESFY 570

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST--------------------KNHDLLPIF 385
               AV  AL ++++T + ++ +  L                             L  + 
Sbjct: 571 DKKAAVHEALCDNVDTRTVLEEMRALVSRCNLYMAARKAARRRPNRALLESIALYLTHML 630

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 631 KIFGAIEEESSLGFPVRGPGTSLDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 690

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 691 ALRDDILPELGVRFEDHEG 709



 Score =  136 bits (344), Expect = 6e-30,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+++YN+L R    F       +  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G 
Sbjct: 103 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLRGYFGY 162

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITD+DDKII RARQ +      +
Sbjct: 163 D-VLYCMNITDVDDKIIRRARQNYLFEQYRE 192


>gi|147899657|ref|NP_001080786.1| cysteinyl-tRNA synthetase, cytoplasmic [Xenopus laevis]
 gi|82241490|sp|Q7ZWR2|SYCC_XENLA RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|28436794|gb|AAH46746.1| Cars-prov protein [Xenopus laevis]
          Length = 747

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 115/443 (25%), Positives = 183/443 (41%), Gaps = 85/443 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             +    I  N   S +      ++ KD   L  L P    R + ++P+++  +Q I+ +
Sbjct: 198 DEKHGAQIADNSIFSQLPKYWEGEYHKDMEALNVLTPDVLTRVSEYVPEIVAFVQKIVDN 257

Query: 143 GHAYEANNEIIFDTSSIPN-----YGSFSRRKIDEQKMGTRVPEK--------YHKKNPA 189
           G+ Y +N  + F T+   +     Y       + +QK                  K++P 
Sbjct: 258 GYGYVSNGSVYFSTAKFHDSENHFYAKLVPEAVGDQKALQEGEGDLSISADRLSEKQSPN 317

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S P EP WESPWG+GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+
Sbjct: 318 DFALWKASKPGEPSWESPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNEL 377

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS      +     ++H G L + G KMSKS  NFITI + L+          A  +RL
Sbjct: 378 AQSEAYFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALQKN-------TARQLRL 430

Query: 310 AMLMTHYREPIDFTVQRLTEAE-------------ILLSKWPQTSTSKGIIDP------- 349
           A LM  +++ +D++   +  A                L + P   T + +          
Sbjct: 431 AFLMHSWKDTLDYSNNTMESAVQYEKFMNEFFLNVKDLLRAPTDITGQFVKWEVLEIELN 490

Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKN----------------------- 378
                   A+  AL ++++T + ++ +  L  +                           
Sbjct: 491 NCFYSKKAAIHEALCDNIDTRTVMEEMRSLVSQCNSYIASKKVAKQFPNRMLLRSISSYL 550

Query: 379 HDLLPIFNASA--HILGIEVCKEHLNKNISIAIEKLVQE--------RLILLKMKK---F 425
             +L +F A     ++G  +     + N+   +   +Q         R I  + K     
Sbjct: 551 TSMLKVFGAIEGEEVIGFPIGGSENSMNLESTVMPYLQVLSQFREGVRQIARQHKVTEVL 610

Query: 426 SSADYIRKQ-LESKGFILEDYKN 447
             +D +R   L   G  LED++ 
Sbjct: 611 QLSDLLRDDILPELGVRLEDHEG 633



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+
Sbjct: 25  QPGLRLYNSLTRSKELFFPQVGRKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF 84

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            +  V Y  NITDIDDKII+RARQ H      ++ 
Sbjct: 85  -KYDVFYCMNITDIDDKIIKRARQRHLFQQYRESN 118


>gi|119622942|gb|EAX02537.1| cysteinyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
 gi|193788362|dbj|BAG53256.1| unnamed protein product [Homo sapiens]
          Length = 738

 Score =  311 bits (797), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 193 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 486 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 545

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 546 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 605

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 606 ALRDNILPELGVRFEDHEG 624



 Score =  119 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
               F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NIT
Sbjct: 28  TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNIT 86

Query: 74  DIDDKIIERARQEHPSIPINDAISIITS 101
           DIDDKII+RARQ H      +       
Sbjct: 87  DIDDKIIKRARQNHLFEQYREKRPEAAQ 114


>gi|303304987|ref|NP_001181926.1| cysteinyl-tRNA synthetase, cytoplasmic isoform e [Homo sapiens]
          Length = 809

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDNILPELGVRFEDHEG 717



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 207


>gi|302698421|ref|XP_003038889.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
 gi|300112586|gb|EFJ03987.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
          Length = 768

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/423 (26%), Positives = 177/423 (41%), Gaps = 80/423 (18%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           + +    +F  D  RL    P    R T ++P+++  +Q +I +G+AYE+   + FDT +
Sbjct: 237 LAAYWEGRFFDDMARLRVRRPDTVTRVTEYVPEIVAFVQKVIDNGYAYESAGSVYFDTQA 296

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEK----YHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
                +    K++    G R  +       +++ +DF LWK S P EP WESPWG GRPG
Sbjct: 297 FDAAPNHFYAKLEPYSKGNREDDGGSRAAGQRSASDFALWKASKPGEPYWESPWGHGRPG 356

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS          N ++H G L++E
Sbjct: 357 WHIECSVMASAILGDNMDIHSGGVDLAFPHHDNEMAQSEAYHDCSAWVNYFLHTGHLHIE 416

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT------ 328
           G KMSKS  NFITI+E+LE        + A  +RL+ L   +   +DF+   +       
Sbjct: 417 GLKMSKSLKNFITIDEILER-------FTARQLRLSFLSQLWNAKLDFSEALMQGEVRGI 469

Query: 329 EAE-----ILLSKWPQTSTSKG---------------------IIDPAVLSALYNDLNTV 362
           EA+      L+      + + G                         A  +AL +  NT 
Sbjct: 470 EAQFNNFFTLVKALISDAKASGQKSDGYHHYEAQEAELTKALYEAQAAFRAALCDSFNTP 529

Query: 363 SAIQALHKLARESTKN-------------HDLLPIFNASAHILGI-------------EV 396
            A+  L  L   +                  +         + G+             + 
Sbjct: 530 VALNVLRDLVSRTNVYVNSRGKLVNLAVVEQVARWVGKMLRMFGLGEGEVDEIGWGNADQ 589

Query: 397 CKEHLNKNISIAIEKLVQERLILLK---------MKK-FSSADYIRK-QLESKGFILEDY 445
             E   + +   +  +   R  + K         +K   + +D +R   L   G  L+D 
Sbjct: 590 TSEQKEEVLMPYLRAMSAFRDAVRKVAIEKSPSALKDILALSDRLRDVDLVPLGVALDDQ 649

Query: 446 KNP 448
           ++ 
Sbjct: 650 EDG 652



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 2/116 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +K+YNTL +   EF   +   ++ Y CGPTVYD +H+G+AR  +  D+L R++  Y+
Sbjct: 16  EPVLKVYNTLTKAKNEFIPSNGRLVKWYNCGPTVYDASHMGHARNYVSQDILRRIMSDYF 75

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
           G   V +V NITDID+KII+RAR+ H         + +T +   Q  +D  RL   
Sbjct: 76  GYD-VHFVMNITDIDNKIIDRARKTHLLETFLKESTQLTPELIAQ-TEDAWRLYIR 129


>gi|114635650|ref|XP_001156338.1| PREDICTED: cysteinyl-tRNA synthetase isoform 7 [Pan troglodytes]
          Length = 683

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDDILPELGVRFEDHEG 634



 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|62240992|ref|NP_001014437.1| cysteinyl-tRNA synthetase, cytoplasmic isoform c [Homo sapiens]
 gi|57997552|emb|CAI46108.1| hypothetical protein [Homo sapiens]
 gi|119622946|gb|EAX02541.1| cysteinyl-tRNA synthetase, isoform CRA_e [Homo sapiens]
 gi|194380236|dbj|BAG63885.1| unnamed protein product [Homo sapiens]
          Length = 831

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDNILPELGVRFEDHEG 717



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 207


>gi|21269877|ref|NP_644802.1| cysteinyl-tRNA synthetase, cytoplasmic isoform a [Homo sapiens]
 gi|9837517|gb|AAG00579.1|AF288207_1 cysteinyl-tRNA synthetase [Homo sapiens]
 gi|119622943|gb|EAX02538.1| cysteinyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 726

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDNILPELGVRFEDHEG 634



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|297687912|ref|XP_002821443.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 6
           [Pongo abelii]
          Length = 662

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 112/439 (25%), Positives = 178/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198

Query: 147 EANNEIIFDTSSI-----PNYGSF--------SRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +N  + FDT+        +YG          +  +  E  +         K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 258

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 491

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 552 ALRDDILPELGVRFEDHEG 570



 Score = 69.1 bits (168), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           +G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+RARQ H      +      
Sbjct: 1   MGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAA 59

Query: 101 S 101
            
Sbjct: 60  Q 60


>gi|71402719|ref|XP_804237.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70867098|gb|EAN82386.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 785

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 117/446 (26%), Positives = 179/446 (40%), Gaps = 80/446 (17%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             +E   +              + F +D  RL    P    R T ++PQ++  IQ I+ +
Sbjct: 222 DEREGQYVTDQSIFEDHARLYERLFFEDMRRLGVRDPDVVSRVTEYVPQVVDFIQKIMDN 281

Query: 143 GHAYEANNEIIFDTSSI----PNYGSF-----------SRRKIDEQKMGTRVPEKYHKKN 187
           G AY   + I FDT++      +Y              +  ++ E +    V     K+N
Sbjct: 282 GFAYRGTSSIFFDTAAFLRAGHDYPKLKPVSERGENDATEAEMAEGEGALTVGVAGEKRN 341

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
             DF LWK S P EP W SPWG GRPGWHIECS M+S  LG   D+H GG DL FPHH+N
Sbjct: 342 ANDFALWKFSKPGEPRWPSPWGAGRPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDN 401

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           E AQS       +  N ++H G L+++G KMSKS  NFITI + L+            V+
Sbjct: 402 ECAQSEACHMQHQWINYFLHCGHLHIKGLKMSKSLKNFITIRQALDELDVT-----PRVM 456

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------- 347
           RL  L  H+ +P++F+ Q + EA+           S  I+                    
Sbjct: 457 RLLFLANHWGKPMNFSDQSIEEAKERERVLRAFFGSVDIVLRKDNWGKTQGLNDHDRRLQ 516

Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
                 + AV  AL N+ +T +A+ ++  L   +                 +        
Sbjct: 517 ETWLTAENAVHGALQNNFDTPAAMDSVMGLVGATNHYLLSGERPSATLVRKVGRYVTRIL 576

Query: 390 HILGI--------EVCKEHLNKNISIAIEKLVQERLILL-KMKK-------FSSADYIRK 433
            + G+           ++  +  +   ++ L++ R  +    K            D +R 
Sbjct: 577 QVFGVVEGTDMVGFATQQGSDDRLLTVMDALLRFRDGVRDAAKVENSTETFLPLCDAVRD 636

Query: 434 Q-LESKGFILEDYKNPDNGQRMTRWK 458
           + L   G  +ED          T WK
Sbjct: 637 EWLVPAGIRIEDNPAGP-----TTWK 657



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 14/114 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +++ N+L   +  F   +   +R Y CGPTVY+ +H+G+AR  + FD+L R++  Y+G
Sbjct: 37  KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMEDYFG 96

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV--KDTTRL 114
              V Y  NITDIDDKII+RAR            S +  +  + F+  +D  RL
Sbjct: 97  -YQVVYQMNITDIDDKIIKRARI-----------SALLKRFREDFLQGRDMARL 138


>gi|30583997|gb|AAP36247.1| Homo sapiens cysteinyl-tRNA synthetase [synthetic construct]
 gi|60652837|gb|AAX29113.1| cysteinyl-tRNA synthetase [synthetic construct]
 gi|60652839|gb|AAX29114.1| cysteinyl-tRNA synthetase [synthetic construct]
          Length = 749

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDNILPELGVRFEDHEG 634



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|170093199|ref|XP_001877821.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164647680|gb|EDR11924.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 796

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 111/431 (25%), Positives = 178/431 (41%), Gaps = 87/431 (20%)

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
             + +    +F  +  RL    P    R T ++P+++  ++ II +G+AYEA   + FDT
Sbjct: 261 RSLAAYWEGKFFDEMARLKVREPDIVTRVTEYVPEIVAYVERIIQNGYAYEAEGSVYFDT 320

Query: 157 SSI-----PNYGSF-----SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
            +       NY          R++ E   G  +  +  +++P+DF LWK S P EP W S
Sbjct: 321 LTFDGTDGHNYAKLEPWSKGNRELLEGGEGA-LSSRTGRRSPSDFALWKASKPGEPSWPS 379

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECS M+S   G+  DIH GG DL FPHH+NE+AQ+          N ++
Sbjct: 380 PWGPGRPGWHIECSVMASAIFGENIDIHSGGSDLAFPHHDNEMAQAEAYHNCSPWVNYFL 439

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G L++EG KMSKS  NFITI+E+L       + +    +RLA L   +   +DF+   
Sbjct: 440 HTGHLHIEGLKMSKSLKNFITIDEIL-------QKFTPRQLRLAFLTQLWNSKVDFSESL 492

Query: 327 L---------------TEAEILLSKWPQTSTSKGIIDP-----------------AVLSA 354
           +               T  + L+S++     +   +                   A  +A
Sbjct: 493 MTGEVRNTETTMNNFFTNVKALVSQYRAEGMASDGLHHYESHERELISSLHRSQSAFRAA 552

Query: 355 LYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHILGI------- 394
           L +  NT  A+  L  +   +                 ++         + G+       
Sbjct: 553 LCDSFNTPVALDTLRDIVSRTNVYINSRGKALNVPVVENVARWVGEMLRMFGLGEGEKSQ 612

Query: 395 ------EVCKEHLNKNISIAIEKLVQERLILLK---MKK-------FSSADYIRK-QLES 437
                 E    +  + ++  I  L   R  +      K         + +D +R   L  
Sbjct: 613 IGWGQVEEADTNREEILTPYIRTLSSFRDGVRALAMAKNETSLKDILALSDKLRDVDLVP 672

Query: 438 KGFILEDYKNP 448
            G  L+D ++ 
Sbjct: 673 LGVALDDQEDG 683



 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/105 (39%), Positives = 66/105 (62%), Gaps = 1/105 (0%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +++YN+L +  TEF   +  +++ Y CGPTVYD +H+G+AR  +  D+L R++  Y+
Sbjct: 52  EQVLRVYNSLTKTKTEFVPTNGRHVKWYNCGPTVYDASHMGHARNYVTQDILRRIMSDYF 111

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
           G   V +V N+TDIDDKIIERARQ H         + +++    Q
Sbjct: 112 GYD-VHFVMNVTDIDDKIIERARQNHLLDTFRIQTTTLSAALIDQ 155


>gi|10835051|ref|NP_001742.1| cysteinyl-tRNA synthetase, cytoplasmic isoform b [Homo sapiens]
 gi|20141641|sp|P49589|SYCC_HUMAN RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|9837515|gb|AAG00578.1|AF288206_1 cytoplasmic cysteinyl-tRNA synthetase [Homo sapiens]
 gi|12804055|gb|AAH02880.1| Cysteinyl-tRNA synthetase [Homo sapiens]
 gi|32880169|gb|AAP88915.1| cysteinyl-tRNA synthetase [Homo sapiens]
 gi|60655925|gb|AAX32526.1| cysteinyl-tRNA synthetase [synthetic construct]
 gi|119622941|gb|EAX02536.1| cysteinyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|119622945|gb|EAX02540.1| cysteinyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|123979740|gb|ABM81699.1| cysteinyl-tRNA synthetase [synthetic construct]
          Length = 748

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDNILPELGVRFEDHEG 634



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|327259955|ref|XP_003214801.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Anolis
           carolinensis]
          Length = 826

 Score =  310 bits (795), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 116/439 (26%), Positives = 175/439 (39%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     +++  D   L  L P    R + +IP+++  +Q I+ +G+ Y
Sbjct: 281 GSQVTDNSIFSKLPKFWEEEYHNDMAALNVLPPDVLTRVSEYIPEIVDFVQKIVDNGYGY 340

Query: 147 EANNEIIFDTSSIPNYGSFSRRKI-------------DEQKMGTRVPEKYHKKNPADFIL 193
            +N  + FDT         S  K+              E  +         K +P DF L
Sbjct: 341 VSNGSVYFDTVKFDASEKHSYAKLVPEAVGDQKALQEGEGDLSVSADRLSEKHSPNDFAL 400

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP WESPWG+GRPGWHIECSAM+   LG+  DIHGGG DL FPHH+NE+AQS 
Sbjct: 401 WKSSKLGEPSWESPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 460

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 461 AYFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHTARQLRLAFLM 513

Query: 314 THYREPIDFTVQRLTEA--------------EILL----------SKWP----QTSTSKG 345
             +++ +D++   +  A              + +L           KW     + + S  
Sbjct: 514 HSWKDTLDYSCNTMESAIQYEKFMNEFFLNVKDILRAPADVTGQFEKWEKQEIELNKSFY 573

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
               AV  AL ++++T + ++ +  L  +                               
Sbjct: 574 EKKVAVHEALCDNIDTRTVLEEMRSLVSQCNSYMAAKKAARQMPNRMLLENTSIYLTQMF 633

Query: 390 HILGIEVCKEHL---------NKNISIAIEKLVQE--------RLILLKMKKFS---SAD 429
            I G     E +         N N+   +   +Q         R I  + K F      D
Sbjct: 634 KIFGAIESDEAIGFPVGGNGGNLNLESTVMPYLQILSEFREGVRQIAREKKVFEVLQLCD 693

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 694 SLRDDVLPEHGVRFEDHEG 712



 Score =  134 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 44/100 (44%), Positives = 62/100 (62%), Gaps = 1/100 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+ +YN+L R   +FQ  + + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+
Sbjct: 104 QPKLCLYNSLTRNKDKFQPQNGNKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF 163

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
            +  V Y  NITDIDDKII+RARQ H      +     T 
Sbjct: 164 -KYDVFYCMNITDIDDKIIKRARQNHLFEQYTEKKPSATQ 202


>gi|194218608|ref|XP_001492545.2| PREDICTED: similar to CysRS protein [Equus caballus]
          Length = 868

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 116/443 (26%), Positives = 175/443 (39%), Gaps = 85/443 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                  +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +
Sbjct: 319 DSTHGSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDN 378

Query: 143 GHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPA 189
           G+ Y +N  + FDT         +YG      + +Q+                  K++P 
Sbjct: 379 GYGYASNGSVYFDTVKFASSEKHSYGKLVPEAVGDQRALQEGEGDLSISADRLSEKRSPN 438

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+
Sbjct: 439 DFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNEL 498

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS      +     ++H G L + G KMSKS  NFITI + L       +   A  +RL
Sbjct: 499 AQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRL 551

Query: 310 AMLMTHYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKG 345
           A LM  +++ +D++   +  A                             KW        
Sbjct: 552 AFLMHSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEDEEAELN 611

Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP------ 383
                   AV  AL ++++T + ++ +  L  +               N  LL       
Sbjct: 612 KSFYDRKTAVHEALCDNVDTRTVLEEMRALVGQCNLYMASRKAVRRRPNRALLESIALYL 671

Query: 384 --IFNASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KF 425
             +      I     LG  V     + N+   +   +Q         R I  + K     
Sbjct: 672 THMLKIFGAIEENSMLGFPVGGPGGSLNLESTVMPYLQVLSEFREGVRKIARERKVAEVL 731

Query: 426 SSADYIRKQ-LESKGFILEDYKN 447
             +D +R   L   G   ED++ 
Sbjct: 732 QLSDALRDDILPELGVRFEDHEG 754



 Score =  134 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/91 (45%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F       +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 147 RLRLYNSLTRNKDVFIPQSGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-K 205

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII+RARQ +      +
Sbjct: 206 FDVFYCMNITDIDDKIIKRARQNYLFEQYRE 236


>gi|114635648|ref|XP_001155769.1| PREDICTED: cysteinyl-tRNA synthetase isoform 1 [Pan troglodytes]
          Length = 656

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 111 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 170

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 171 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 230

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 231 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 290

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 291 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 343

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 344 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 403

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 404 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 463

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 464 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 523

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 524 ALRDDILPELGVRFEDHEG 542


>gi|167526279|ref|XP_001747473.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163773919|gb|EDQ87553.1| predicted protein [Monosiga brevicollis MX1]
          Length = 531

 Score =  310 bits (794), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 102/315 (32%), Positives = 151/315 (47%), Gaps = 43/315 (13%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T     ++  D   L    PT   R T ++ +++  I+ II +G+AY +N  + FD+  
Sbjct: 122 LTQHWEAEYFADMAALNVRPPTVLTRVTEYVEEIVTFIEQIISNGYAYASNGSVYFDSPR 181

Query: 159 I-----PNYGSF---SRRKIDEQK--MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
                  +Y      + + +       G+       K++P DF LWK S P EP W+SPW
Sbjct: 182 YAASDAHDYPKLVPEASQDVASLADAEGSLSSSDNEKRSPYDFALWKASKPGEPAWDSPW 241

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G+GRPGWHIECSAM     G   DIH GG+DL FPHH+NEIAQS       +  N + H+
Sbjct: 242 GKGRPGWHIECSAMCHAAFGDKIDIHSGGIDLCFPHHDNEIAQSEAFYDQGQWCNYFCHS 301

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L +EG KMSKS  NFITI + L       +   A  IRL  L   +   +D++   + 
Sbjct: 302 GHLTIEGLKMSKSLKNFITIKDAL-------KKHNATQIRLTFLTHGWNSTLDYSEAGMV 354

Query: 329 EAEILLSKWPQ--------------------TSTSKGIID------PAVLSALYNDLNTV 362
           EA +L  ++ +                    T   KG++         +  AL ++ +T 
Sbjct: 355 EATVLEKQFKEFFYTVNALVRRDEGQPFRDMTENDKGLLQTFGVHRQRLHEALCDNFDTA 414

Query: 363 SAIQALHKLARESTK 377
           +AI A+  L  E+ K
Sbjct: 415 TAIAAMRSLMTEANK 429



 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 40/95 (42%), Gaps = 11/95 (11%)

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT-TRLACLAP 119
           Y    V +V NITDIDDKII RARQ++           + S   +    D    LA    
Sbjct: 4   YFGYDVKFVMNITDIDDKIIVRARQQYLY------DQYVASHANESVEADVRAALAVYVA 57

Query: 120 ----THQPRATNHIPQMIYLIQNIILHGHAYEANN 150
               + +P     + + I  ++ ++  G A E  +
Sbjct: 58  KQEKSEEPALKAMMQKTIDAVEALLAAGSATENAD 92


>gi|111222276|ref|YP_713070.1| cysteinyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123338663|sp|Q0RLV2|MSHC_FRAAA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|111149808|emb|CAJ61502.1| Cysteinyl-tRNA synthetase 2 (Cysteine--tRNA ligase 2) [Frankia alni
           ACN14a]
          Length = 413

 Score =  309 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 108/347 (31%), Positives = 167/347 (48%), Gaps = 23/347 (6%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCG T YD  H+G+A   + +D+  R+LR       V YV+N+TD+DD ++ERA ++ 
Sbjct: 12  LYVCGITPYDATHLGHAFTYLTYDLAQRVLRDSG--HKVLYVQNVTDVDDPLLERADRDG 69

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                      + ++    F +D T L  LAP         IP ++ ++  ++  G AY 
Sbjct: 70  LDW------RDLAAREIALFREDMTALRMLAPDSYVGVVEAIPMIVDMVAELVDRGAAYH 123

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
            ++++ F  ++ P +G  S     E           P +  KK+P D +LW+   P EP 
Sbjct: 124 VDDDLYFSVAAAPAFGEISHLSRAEMLAICAERGGDPGRGGKKDPLDPLLWRARRPGEPS 183

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SP+G GRPGWHIECSA++ H+LG V D+ GGG DL FPHHE   A +  A      A 
Sbjct: 184 WPSPFGPGRPGWHIECSAIARHHLGGVVDLQGGGTDLSFPHHECSAAHAEVAAGARPFAR 243

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H   ++L+G KMSKS GN   ++ L            A +         +    +++
Sbjct: 244 SYVHTAMVSLDGHKMSKSRGNLEFVSRLRRAGTDLAALRLALL------DHRHTADWEWS 297

Query: 324 VQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAI 365
              LT+A   + +W          D      AV   L +DL+   A+
Sbjct: 298 ASLLTDAVARVGRWRAAVALPAGPDAQGVLAAVRERLADDLDAPGAL 344


>gi|332835587|ref|XP_003312913.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 662

 Score =  309 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 491

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 552 ALRDDILPELGVRFEDHEG 570



 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           +G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+RARQ H      +      
Sbjct: 1   MGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAA 59

Query: 101 S 101
            
Sbjct: 60  Q 60


>gi|195431327|ref|XP_002063694.1| GK15775 [Drosophila willistoni]
 gi|194159779|gb|EDW74680.1| GK15775 [Drosophila willistoni]
          Length = 741

 Score =  309 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 118/449 (26%), Positives = 174/449 (38%), Gaps = 89/449 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            +Q+   I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +
Sbjct: 191 DKQKGAQINDNSVFEALPQYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDN 250

Query: 143 GHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
           G AY AN+ + FD +                 YG     +  E  +         K++  
Sbjct: 251 GLAYAANSSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSIAEDRLSEKRSAN 310

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S   EP W+SPWGRGRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+
Sbjct: 311 DFALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDVFGSQFDIHTGGVDLKFPHHDNEL 370

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS  A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RL
Sbjct: 371 AQSEAAFNEAEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRL 423

Query: 310 AMLMTHYREPIDFTVQRLTEA--------------------------EILLSKWPQTSTS 343
           A L+  +++ +D++   +  A                                W +   +
Sbjct: 424 AFLLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSDEPRKQFDAWSEVEAA 483

Query: 344 K----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFN 386
                      V  AL ++++T SA+  + +L   S                 ++     
Sbjct: 484 LQKKFASSQEQVHVALCDNIDTRSALDVIRELVSASNVYIRDNKTRLNSLLLRNIATYIT 543

Query: 387 ASAHILGIEV------------------CKEHLNKNISIAIEKLVQ----ERLILLKMKK 424
              H+ G                       + L   +   ++ L +     R     +K 
Sbjct: 544 DLLHVFGAIAGPRGGIGFPMSGGQSTNGSNQDLETTLLPYVQSLAEFRNVVREQAKVLKA 603

Query: 425 F---SSADYIRKQ-LESKGFILEDYKNPD 449
           F      D +R   L + G  LED     
Sbjct: 604 FDILKLCDDLRDNILPNLGVRLEDKDGGQ 632



 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K++++N+L R+  EF  +  + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RAKLRLFNSLTRQKEEFVPLQGNTVTWYSCGPTVYDASHMGHARSYISFDILRRILSNYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII+RARQ H     
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQNHLFNEY 106


>gi|158259887|dbj|BAF82121.1| unnamed protein product [Homo sapiens]
          Length = 647

 Score =  309 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             ++  +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKGTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDNILPELGVRFEDHEG 634



 Score =  139 bits (350), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|114635644|ref|XP_508228.2| PREDICTED: cysteinyl-tRNA synthetase isoform 9 [Pan troglodytes]
 gi|114635646|ref|XP_001156007.1| PREDICTED: cysteinyl-tRNA synthetase isoform 5 [Pan troglodytes]
          Length = 684

 Score =  309 bits (793), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 491

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 552 ALRDDILPELGVRFEDHEG 570



 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           +G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+RARQ H      +      
Sbjct: 1   MGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAA 59

Query: 101 S 101
            
Sbjct: 60  Q 60


>gi|299752108|ref|XP_001830705.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298409681|gb|EAU91074.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 820

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 117/429 (27%), Positives = 181/429 (42%), Gaps = 85/429 (19%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              + +    +F  D  +L  + P    R T+++P++I  I  II +G+AY     + FD
Sbjct: 297 YRRLAAHWEAEFFSDMAKLNVVPPDVVTRVTDYVPEIINFIDRIIQNGYAYSVGGNVYFD 356

Query: 156 TSSI-----PNYGSFSRRKIDE--QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
             +        YG       +              HKK+P+DF LWK S P EP WESPW
Sbjct: 357 IRAFNQAPGHQYGKLIPWNENHGGMDDAGDTAPAAHKKSPSDFALWKASKPGEPFWESPW 416

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GRPGWHIECSAM++  LG+  DIH GG+DL+FPHH NE+AQS    + +   + +IH 
Sbjct: 417 GPGRPGWHIECSAMATAILGEKLDIHSGGIDLLFPHHTNELAQSEAYFKTDSWVDCFIHT 476

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L+++G KMSKS  NFI+I ++L+        + A  +RLA L+  +    DF+ + + 
Sbjct: 477 GHLHIQGLKMSKSLKNFISIKDILQC-------YTADQLRLAFLLHPWHAKFDFSDEFMK 529

Query: 329 EAEILLSKWPQ------------------------------TSTSKGIIDPAVLSALYND 358
              + L  +                                  T       A  SAL N 
Sbjct: 530 SEVLTLEAFFANLFSRTRSLARAAQSSYPPPAQHFGAHEAVLRTQLEDAKVAFRSALANS 589

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIF-------------NASAHILGIEVCKEH----- 400
           +++V A+  L KL  ++    D    F                  + G+ +         
Sbjct: 590 IDSVGALNVLRKLTSQTNIYIDRRGDFINVALLGSVTRWITKMLQLFGLTIGDASNLAST 649

Query: 401 -LNKNISIAI-----EKLVQERLILLKMKKFSSA-------------DYIRKQ-LESKGF 440
            + ++   AI     E L + R  + ++   + A             D +R + L   G 
Sbjct: 650 RIREDEREAIVYPYLEALAKFRDGVRQL---AKASVGPASGELLMLCDQLRDEVLPPLGV 706

Query: 441 ILEDYKNPD 449
            LED  + +
Sbjct: 707 SLEDKPDGN 715



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 1/112 (0%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+ +YN+L +  TE  +     ++ Y CGPTVYD +H+G+AR  +  DV+ R+L  Y+
Sbjct: 85  ELKLLLYNSLTKSKTEVTSASARPLKWYSCGPTVYDTSHLGHARNYVTQDVMRRILTDYF 144

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           G   + YV N+TDIDDKIIER RQ +         + +T     +  +    
Sbjct: 145 GLN-IQYVMNVTDIDDKIIERTRQHYFLDKFRQKHTRLTLDLISEVEEAVEA 195


>gi|157105607|ref|XP_001648945.1| cysteinyl-tRNA synthetase [Aedes aegypti]
 gi|108880067|gb|EAT44292.1| cysteinyl-tRNA synthetase [Aedes aegypti]
          Length = 735

 Score =  309 bits (792), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 130/450 (28%), Positives = 187/450 (41%), Gaps = 86/450 (19%)

Query: 74  DIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
           D  D + +   ++E  S+  N     +      +F KD   L  LAP    R + ++PQ+
Sbjct: 180 DSKDPLSDLLDKKEGASVNENSIFETLPRYWEDEFHKDMNALNVLAPDVLTRVSEYVPQI 239

Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRV 179
           +  IQ II +G AYEAN  + FD +                 YG     +  E  + T  
Sbjct: 240 VEYIQKIIDNGLAYEANGSVYFDVAGFDKREKHYYAKLVPEAYGDAKSLQEGEGDLSTTE 299

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++P DF LWK S   EP W SPWG+GRPGWHIECSAM+S   G   DIH GG+D
Sbjct: 300 DRLSEKRSPNDFALWKNSKAGEPWWNSPWGKGRPGWHIECSAMASDICGDYLDIHTGGVD 359

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH+NE+AQS   D   +    ++H G L + G KMSKS  NF+TI + L       
Sbjct: 360 LKFPHHDNELAQSEAHDNSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQAL------- 412

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKW------------------- 337
           +   A  +RLA L+  +++ +D++   +  A   E  L+++                   
Sbjct: 413 QKHTATQLRLAFLLHSWKDTLDYSENTMEMAVQYERFLNEFFLNVKDLTRHVVSGKPRDQ 472

Query: 338 --------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------KNH---- 379
                               AV  AL ++++T SA+ A+  L   S       KN     
Sbjct: 473 FNLWTPVEADLQQKLNATKDAVHVALCDNIDTRSALDAVRDLVSHSNVYIRDHKNELNAL 532

Query: 380 ----------DLLPIFNASA---HILGIEVCKEHLNKNISIAI--------EKLVQERLI 418
                     DLL IF A       +G  V     + ++   +        +     R  
Sbjct: 533 LLRRIAGYITDLLHIFGAINGPRGGIGFPVGGSAGSADLEETVMPYLVALSDFRTAVREQ 592

Query: 419 LLKMKK---FSSADYIRKQ-LESKGFILED 444
              +K        D IR   L + G  LED
Sbjct: 593 ARTLKATDILQLCDQIRDDILPNLGVRLED 622



 Score =  139 bits (352), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 45/98 (45%), Positives = 64/98 (65%), Gaps = 1/98 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+++YN+L R+   F   D  N++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 18  EPKLRLYNSLTRQKELFVPKDGKNVKWYSCGPTVYDASHMGHARSYISFDILRRVLTDYF 77

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           G   V YV NITDIDDKII+RARQ +      +  + +
Sbjct: 78  GYN-VLYVMNITDIDDKIIKRARQNYLYERYVERTTSL 114


>gi|194391202|dbj|BAG60719.1| unnamed protein product [Homo sapiens]
          Length = 809

 Score =  309 bits (792), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 115/439 (26%), Positives = 182/439 (41%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578

Query: 348 DP--AVLSALYNDLNTVSAIQA---------LHKLARES-----------TKNHDLLPIF 385
           D   A+  AL ++++T + ++          L+  AR++                L  + 
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRASVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                +     LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDNILPELGVRFEDHEG 717



 Score =  139 bits (351), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 207


>gi|194379958|dbj|BAG58331.1| unnamed protein product [Homo sapiens]
          Length = 662

 Score =  309 bits (791), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 491

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 552 ALRDNILPELGVRFEDHEG 570



 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           +G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+RARQ H      +      
Sbjct: 1   MGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAA 59

Query: 101 S 101
            
Sbjct: 60  Q 60


>gi|111153388|emb|CAJ65144.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysS1) [Frankia
           alni ACN14a]
          Length = 458

 Score =  308 bits (790), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 123/307 (40%), Positives = 165/307 (53%), Gaps = 28/307 (9%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  VT V+N+TDIDDKII  A ++        ++  + ++ T+ F      +  L PT Q
Sbjct: 4   EHEVTLVQNVTDIDDKIIVNADRD------GTSVWELATRQTRAFDDAYRTIGILPPTIQ 57

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PRAT HIP+MI LI  +I  GHAY     + F   S P YG+ S ++ D          +
Sbjct: 58  PRATGHIPEMIALISALIAGGHAYAGAGSVWFRVGSFPGYGALSHQRPDSMLPSA--ESE 115

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+  YLG VFDIHGGGLDL+F
Sbjct: 116 PGKADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVF 175

Query: 243 PHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           PHHENE AQ+ C          E+ A  W+H G L   G KMSKS GN + + + LE  +
Sbjct: 176 PHHENERAQTVCAAGGAAGAGAEEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALEAVR 235

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAV 351
                    V+R  +L  HYR  +++T + L E+     +      +      G  + A 
Sbjct: 236 -------PQVLRYHLLSAHYRSTLEYTPEALGESAAAHDRVETFVRNALDILGGPGEAAA 288

Query: 352 LSALYND 358
           L+A  +D
Sbjct: 289 LAA--DD 293



 Score = 73.7 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 36/104 (34%), Gaps = 15/104 (14%)

Query: 363 SAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKE------HLNKNISI 407
            A+ A+     +           K    + +      +LG++  ++       L   +  
Sbjct: 352 RALAAIFGAVGQGNQVLSKAHSRKLAGWVDVTRRMLGVLGLDPHEQWPSAGAELRPALDG 411

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            ++  +  R      + F+ AD IR +L + G I+ED       
Sbjct: 412 VVQIALDLRSAARARRDFAEADSIRSRLAAAGLIVEDTPEGQRW 455


>gi|119622944|gb|EAX02539.1| cysteinyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
          Length = 622

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 491

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 552 ALRDNILPELGVRFEDHEG 570



 Score = 68.7 bits (167), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           +G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKII+RARQ H      +      
Sbjct: 1   MGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAA 59

Query: 101 S 101
            
Sbjct: 60  Q 60


>gi|148272876|ref|YP_001222437.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|310947178|sp|A5CRN7|MSHC_CLAM3 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|147830806|emb|CAN01747.1| cysS2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 426

 Score =  308 bits (789), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 115/416 (27%), Positives = 178/416 (42%), Gaps = 45/416 (10%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           +++T    +   +      + +YVCG T YD  HIG+A   + FD L R+      +  V
Sbjct: 21  LFDTSAGSVRPAECTGDGRVGLYVCGITPYDATHIGHASTYLAFDTLQRVWLDRGYD--V 78

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            YV+N+TD+DD ++ERA               + ++  + F  D   L  L P      T
Sbjct: 79  AYVQNVTDVDDPLLERA------TATGVDWRDLAAEQVELFRTDMEALRILPPDSYVGVT 132

Query: 127 NHIPQMIYLIQNIILHGHAYE---------ANNEIIFDTSSIPNYGSF-----SRRKIDE 172
             + ++   +  ++  G AY             ++ FD +     G +     S    D 
Sbjct: 133 EVVDEVAAAVAELVRRGTAYPVATPDAAQPGARDLYFDVARAGADGPWALGDESGYDRDT 192

Query: 173 QKMGT----RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
               +      PE+  K++P D +LW+     EP W+S  GRGRPGWHIEC+ ++   L 
Sbjct: 193 MAALSAERGGDPERPGKRDPLDPLLWRAERADEPAWDSAVGRGRPGWHIECAVIALRKLD 252

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           +   + GGG DLIFPHHE     +      E  A ++ H+G +  +G KMSKS GN + +
Sbjct: 253 RPVTVQGGGSDLIFPHHEMSAGHAAALTG-EDFACVYAHSGMVAYQGEKMSKSLGNLVLV 311

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------ 342
           + L               IRLA+L  HYR   ++T   L E+   L+ W   +       
Sbjct: 312 SRLRAA------GVDPRAIRLALLAQHYRADWEWTDALLAESVARLAAWDAWAADAASTD 365

Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
                 G +   V   L +DL+T  AI  L    R +T          A   +LG+
Sbjct: 366 ADAGEPGELVQLVRERLADDLDTPGAILLLD--LRVATGVPATPVEVAAVDALLGV 419


>gi|156547291|ref|XP_001606432.1| PREDICTED: similar to cysteinyl-tRNA synthetase [Nasonia
           vitripennis]
          Length = 735

 Score =  307 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 116/439 (26%), Positives = 180/439 (41%), Gaps = 84/439 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            +++  ++  +   S ++      F KD   L    P    R + ++P+++  I+ II +
Sbjct: 189 DKKKGDTVTEHSIFSKLSQHWENDFHKDMDALNVWRPNVLTRVSEYVPEIVAFIEKIIAN 248

Query: 143 GHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
           G AYE+N  + FD  +                YG  S  +  E  +         K++  
Sbjct: 249 GLAYESNGSVYFDVKAFDKSEKHYYAKLVPEAYGDTSSLQEGEGDLSVSADRLSEKRSVT 308

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S   EP W+SPWG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+
Sbjct: 309 DFALWKSSKAGEPWWDSPWGKGRPGWHIECSVMASAICGESLDIHTGGVDLKFPHHDNEL 368

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQ+            ++H+G L + G KMSKS  NFITI E L       +   A  +RL
Sbjct: 369 AQAEAYFDNSHWVRYFLHSGHLTISGCKMSKSLKNFITIKEAL-------KKHSARQLRL 421

Query: 310 AMLMTHYREPIDFTVQRLTEAE---------------------------ILLSKWPQTST 342
           A L+  +++ +D+    +  A                                KW Q   
Sbjct: 422 AFLLHSWKDTLDYGDATMDMAVQYEKFLNEFFLNVKCRIRKIGSAGTTINTFDKWGQQEV 481

Query: 343 SKG----IIDPAVLSALYNDLNTVSAIQALHKLA-------RESTKNHDLL--------- 382
                       V +AL ++++T +A+  + +L        ++  K + LL         
Sbjct: 482 ELNNKFCAAKDDVHNALCDNIDTRTALDIIRELVTTSNIYIKDCQKPNTLLLRDIAVYIT 541

Query: 383 PIFNASAHI-----LGIEVCKEHLNKNISIAIEKLVQE--------RLILLKMKK---FS 426
            IF     I     +G  +  E  N N+   I   ++         R     +K      
Sbjct: 542 KIFTVFGAIATHDSIGFPLEDESKNVNLEETIMPYLEILSEFREKVRGHARLLKATDILQ 601

Query: 427 SADYIRKQ-LESKGFILED 444
             D +R   L + G  LED
Sbjct: 602 ECDRLRDDILPNVGVRLED 620



 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 1/90 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+YN+L R+  EF     + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+ 
Sbjct: 18  PPLKLYNSLTRQKEEFVPQYRNRVLWYSCGPTVYDASHMGHARSYISFDILRRVLSDYF- 76

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI 92
              V YV NITDIDDKII+RARQ H     
Sbjct: 77  NFDVVYVMNITDIDDKIIKRARQNHLYENY 106


>gi|62896787|dbj|BAD96334.1| cysteine-tRNA ligase isoform a variant [Homo sapiens]
          Length = 726

 Score =  307 bits (788), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 113/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNSVQKIVDNGYGY 262

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 616 ALRDNILPELGVRFEDHEG 634



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++ +YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +
Sbjct: 28  RLHLYNSLTRNKEVFMPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-K 86

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII+RARQ H      +       
Sbjct: 87  FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 124


>gi|74183161|dbj|BAE22530.1| unnamed protein product [Mus musculus]
          Length = 831

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 118/442 (26%), Positives = 176/442 (39%), Gaps = 91/442 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK-------KF 425
                I     LG  V     N N+   +   +Q         R I  + K        +
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSY 698

Query: 426 SSADYIRKQLESKGFILEDYKN 447
           +  D I   L   G   ED++ 
Sbjct: 699 ALRDDI---LPELGVRFEDHEG 717



 Score =  137 bits (345), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200


>gi|307178002|gb|EFN66863.1| Cysteinyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 738

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 111/439 (25%), Positives = 181/439 (41%), Gaps = 84/439 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++    +  +   + ++     +F KD   L  L P    R + +IP++I  +Q +I +
Sbjct: 189 DKKYGKDVTEHSIFTKLSKDWESEFHKDMDALNVLRPNVLTRVSEYIPEIIAFVQKVIDN 248

Query: 143 GHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
           G AYE+N  + FD                   YG  S  +  E  +         K++  
Sbjct: 249 GFAYESNGSVYFDVGKFDKQEKHSYAKLVPEAYGDTSSLQEGEGDLSVTEDRLSEKRSVT 308

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S   EP W+SPWG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NEI
Sbjct: 309 DFALWKSSKTGEPWWDSPWGKGRPGWHIECSVMASAICGESLDIHTGGVDLKFPHHDNEI 368

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQ+            ++H+G L + G KMSKS  NF+TI + L       + + +  +RL
Sbjct: 369 AQAEAYFDNSNWVKYFLHSGHLTIAGCKMSKSLKNFVTIQDAL-------KKYSSRQLRL 421

Query: 310 AMLMTHYREPIDFTVQRLT---EAEILLSKWP---------------------------Q 339
           A L+  +++ +D++   +    + E  L+++                            +
Sbjct: 422 AFLLHSWKDTLDYSDNTMNIAVQYEKFLNEFFLNIKCKIRCLGTKTTIDSFIKWFNPEIE 481

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR------ESTKN------HDLLPIFNA 387
            + +  +   ++  AL ++++T + ++ + +L           KN       D+      
Sbjct: 482 LNKNFHLAKHSIHKALCDNIDTRTVLEIIRELVTNCNVYMSQNKNPNTLLLRDIAAYITK 541

Query: 388 SAHILG-IEVCKEHLNKNISIAI-------------EKLVQERLILL------KMKK-FS 426
              I G I    E +   I   I             E L   R  +       K      
Sbjct: 542 MFIIFGTISSSYESIGFPIDDEIVGINVEETIMPYLEILANFRQKVRNCAKILKANDILQ 601

Query: 427 SADYIRKQ-LESKGFILED 444
             D +R   L + G  LED
Sbjct: 602 ECDILRDDILPNVGVRLED 620



 Score =  141 bits (357), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LRLYNSLTREKEVFVPQFGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILSDYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV NITDIDDKII+RARQ +           +        + D   +         R
Sbjct: 80  -VLYVMNITDIDDKIIKRARQNYLYEDYVKQNHSL-----DYMLHDMEAV-ICTVDGTVR 132

Query: 125 ATNHIPQMIYLIQNIILH 142
            T   P    +I+ ++  
Sbjct: 133 TTTD-PDKKCMIEKMLYK 149


>gi|125807796|ref|XP_001360523.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
 gi|122097947|sp|Q291L4|SYCC_DROPS RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|54635695|gb|EAL25098.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
          Length = 741

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 122/444 (27%), Positives = 183/444 (41%), Gaps = 89/444 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAEINDNAVFESLPRFWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQKIIDNGLAY 254

Query: 147 EANNEIIFDTSSI-----PNYGSF------SRRKIDEQKMGTRVPEK--YHKKNPADFIL 193
            ANN + FD +        +Y           + + E +    V E     K++  DF L
Sbjct: 255 AANNSVYFDVNGFDRKEKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWGRGRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+
Sbjct: 375 AAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA---EILLSKW----------------PQTSTSKGIIDPA---- 350
             +++ +D++   +  A   E  L+++                 +   +   ++ A    
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTDVEAALQKK 487

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
                  V +AL ++++T SA+ A+ +L   S                 ++        H
Sbjct: 488 FSSSQVQVHAALCDNVDTRSALDAIRELVSASNVYIRDNKSRLNSLLLRNVATYITDLLH 547

Query: 391 ILGI------------------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKF--- 425
           + G                   +     L   +   ++ L +     R     +K F   
Sbjct: 548 VFGAIAGPRGGIGFPVSGGAGPQAAGGDLETTVLPYVQTLAEFRNLVREQAKALKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILEDYKNP 448
              D +R   L + G  LED    
Sbjct: 608 KLCDDLRDNILPNLGVRLEDKDGG 631



 Score =  143 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+++YN+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILADYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII+RARQ H     
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQNHLFEEY 106


>gi|58263374|ref|XP_569097.1| cysteine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|134108600|ref|XP_776953.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50259636|gb|EAL22306.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57223747|gb|AAW41790.1| cysteine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 785

 Score =  306 bits (784), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 117/469 (24%), Positives = 182/469 (38%), Gaps = 94/469 (20%)

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V   TD+    +   +  H           + S     F  D  RL  L P    R + +
Sbjct: 216 VEGATDVLGPYLGE-KLGHTIADPIAVCRRLASYWENAFFTDMARLRVLPPDTITRVSEY 274

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSI---------PNYGSF-----SRRKIDEQK 174
           +P+++  +Q I+ +G AYE    + FD               Y          +K+ ++ 
Sbjct: 275 VPEIVSFVQRIVDNGFAYEGGGSVWFDVDKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEG 334

Query: 175 MGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G        K+ PADF LWK  S P EP W SPWG GRPGWHIECS M+S  LG   DI
Sbjct: 335 EGALT-GSQGKRRPADFALWKAKSKPGEPAWPSPWGEGRPGWHIECSVMASAILGSGMDI 393

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DL+FPHH+NE+AQ+      ++  N ++H G L++EG KMSKS  NFITI+E L+
Sbjct: 394 HSGGVDLMFPHHDNELAQAEAYHGCKQWVNYFLHTGHLHIEGLKMSKSLKNFITIDEALQ 453

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------- 346
           T       + A  +RLA ++  +   +DF    + + +     +    T+          
Sbjct: 454 T-------YSARQLRLAFMLQIWNAKLDFKKDLIVDTKAKEETFDNFFTNVKARMSDAAA 506

Query: 347 ------------------------IDPAVLSALYNDLNTVSAIQALHKLAREST------ 376
                                         +AL +  NT +AIQ L  L           
Sbjct: 507 RGPNEDGKHHYEEAEKSLMADFHKAQNDFRAALCDSFNTPAAIQILLDLVSSVNLYFASR 566

Query: 377 -KNHDLLPIF------NASAHILGI-----------------EVCKEHLNKNISIAIEKL 412
            + +++ P+            + G+                 E         +   +  +
Sbjct: 567 GREYNIAPVVTVAQWITRMLRMFGLGEGDVTSGQIGWGKEGDEASGGDFEGKLDPYLRAM 626

Query: 413 VQERLILLKM--------KKFSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
              R  + ++        +     D  R Q L + G  L+D ++   G 
Sbjct: 627 ASFRDDIRRLAIDGATPGEILKLCDKFRDQDLANLGIQLDDGQSTTGGA 675



 Score =  126 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 46/141 (32%), Positives = 72/141 (51%), Gaps = 10/141 (7%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L R    F   +   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y+
Sbjct: 22  EPVLRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQDIVRRILRDYF 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT----QQFVKDTTR-LAC 116
               V +V N+TDIDDKII RAR+ +           +T +        F K   + L  
Sbjct: 82  -NYDVNFVMNVTDIDDKIILRARESYLLDQAISTNLALTPELISDVEAAFTKYLAKPLKS 140

Query: 117 L--APTHQPRATNHIPQMIYL 135
           L     H P AT+   +++ L
Sbjct: 141 LTAPLEHSPNATSF--EILDL 159


>gi|195150237|ref|XP_002016061.1| GL10698 [Drosophila persimilis]
 gi|194109908|gb|EDW31951.1| GL10698 [Drosophila persimilis]
          Length = 741

 Score =  306 bits (783), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 122/444 (27%), Positives = 183/444 (41%), Gaps = 89/444 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAEINDNAVFESLPRFWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQKIIDNGLAY 254

Query: 147 EANNEIIFDTSSI-----PNYGSF------SRRKIDEQKMGTRVPEK--YHKKNPADFIL 193
            ANN + FD +        +Y           + + E +    V E     K++  DF L
Sbjct: 255 AANNSVYFDVNGFDRKEKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWGRGRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+
Sbjct: 375 AAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA---EILLSKW----------------PQTSTSKGIIDPA---- 350
             +++ +D++   +  A   E  L+++                 +   +   ++ A    
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTDVEAALQKK 487

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
                  V +AL ++++T SA+ A+ +L   S                 ++        H
Sbjct: 488 FSSSQVQVHAALCDNVDTRSALDAIRELVSASNVYIRDNKSRLNSLLLRNVATYITDLLH 547

Query: 391 ILGI------------------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKF--- 425
           + G                   +     L   +   ++ L +     R     +K F   
Sbjct: 548 VFGAIAGPRGGIGFPVSGGAGPQAAGGDLETTVLPYVQTLAEFRNLVREQAKALKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILEDYKNP 448
              D +R   L + G  LED    
Sbjct: 608 KLCDDLRDNILPNLGVRLEDKDGG 631



 Score =  143 bits (362), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+++YN+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILADYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII+RARQ H     
Sbjct: 77  GYN-IHYVMNITDIDDKIIKRARQNHLFEEY 106


>gi|26328991|dbj|BAC28234.1| unnamed protein product [Mus musculus]
          Length = 831

 Score =  306 bits (783), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 118/439 (26%), Positives = 176/439 (40%), Gaps = 85/439 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDKEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLP--------IF 385
               AV  AL ++++T + ++ +  L  +               N  LL         + 
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638

Query: 386 NASAHI-----LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
                I     LG  V     N N+   +   +Q         R I  + K       +D
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698

Query: 430 YIRKQ-LESKGFILEDYKN 447
            +R   L   G   ED++ 
Sbjct: 699 ALRDDILPELGVRFEDHEG 717



 Score =  137 bits (345), Expect = 5e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200


>gi|50550761|ref|XP_502853.1| YALI0D15268p [Yarrowia lipolytica]
 gi|49648721|emb|CAG81041.1| YALI0D15268p [Yarrowia lipolytica]
          Length = 743

 Score =  305 bits (782), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 120/443 (27%), Positives = 204/443 (46%), Gaps = 83/443 (18%)

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           D  ++   +++  ++  +     +++    +F KD  +L  LAP+   R + ++P+++  
Sbjct: 194 DVLVLTLDQEQGSTVSDHKIFRELSAFWEGEFDKDMAKLNVLAPSVTTRVSEYVPEIVEY 253

Query: 136 IQNIILHGHAYEANNEIIFDTSSI---PNYGSF-----SRRKIDEQKMGTRVPEKYHKKN 187
           ++ II +G+AY +++ + FDT++     +Y            + ++  G+ +  K  K+N
Sbjct: 254 VEKIIDNGYAYVSDSGVYFDTAAFDKSHDYAKLQPWNKGHADLIDEGEGS-LSNKTGKRN 312

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
            +DF LWK S P EP W+SPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+N
Sbjct: 313 SSDFALWKASKPGEPFWDSPWGQGRPGWHIECSVMASAILGPQMDIHSGGIDLAFPHHDN 372

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           E+AQS      ++  N ++H G L++EG+KMSKS  NFITI+E L+T       +    +
Sbjct: 373 ELAQSEAHYDCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEALQT-------YSPRQL 425

Query: 308 RLAMLMTHYREPIDFTVQRLTEAE-------------ILLSKWPQTSTSKGII------- 347
           RLA  +  +   +DF    ++E +               L    +   SKG++       
Sbjct: 426 RLAFALQQWNNQLDFKSALISEVKSVESTFSKFFAKVRALKGEVEDKVSKGVLVSKKTGP 485

Query: 348 ------------DPAVLSALYNDLNTVSAIQALHKLARESTKNH--------------DL 381
                         AV  AL ++L T +AIQ + +L  +                   D+
Sbjct: 486 AELALLNALSDCKEAVHIALCDNLATPAAIQNMVQLVGKVNLYLGETSTENVRTEILVDV 545

Query: 382 LPIFNASAHILGIEVCKEHLN---KNISIAIEKLV--------QERLILLKMKKFSSA-- 428
               +    + G     ++L    ++   + E L+          R  +   K  + A  
Sbjct: 546 ATFISKMFAVFGFRTRTDNLGFTEESSEASSEALIMPYLTTLRNFRDDIRG-KAMARAAH 604

Query: 429 -------DYIRKQLESKGFILED 444
                  D +R  L  +G  L+D
Sbjct: 605 LEFLQATDQVRFDLLKQGVSLDD 627



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 40/101 (39%), Positives = 62/101 (61%), Gaps = 1/101 (0%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +K+YN+L R  T F  I  + +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 20  RDTLKLYNSLTRSKTAFVPIAGNKVTWYCCGPTVYDSSHMGHARNYVSTDINRRILQDYF 79

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           G   V +V+N+TDIDDKII R RQ+H      +    ++ +
Sbjct: 80  GYD-VLFVQNVTDIDDKIIIRGRQQHLFQKYVEENKGLSQE 119


>gi|269956278|ref|YP_003326067.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Xylanimonas cellulosilytica DSM 15894]
 gi|310947227|sp|D1BS17|MSHC_XYLCX RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|269304959|gb|ACZ30509.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
           ligase [Xylanimonas cellulosilytica DSM 15894]
          Length = 404

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 108/356 (30%), Positives = 163/356 (45%), Gaps = 26/356 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++++  + + E      +   +Y CG T YD  H+G+A   + FD+L R        K V
Sbjct: 23  VHDSTTQSLVEAAP--GATATLYACGITPYDATHLGHANTYLAFDLLQRAW--LDAGKTV 78

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y  N+TD+DD ++ERA               +  + T+ +  D T L  L P     A 
Sbjct: 79  VYTSNVTDVDDPLLERA------TATGVDWRELAREQTELYRTDMTALRMLPPATWTGAV 132

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVPEK 182
             IP ++  +  ++  G AY  + ++  D S+ P +G  +       +         P++
Sbjct: 133 ESIPAVVEAVTALLDAGAAYRVDADVYADLSADPGFGRVAGLDDATMRALFAERGGDPDR 192

Query: 183 YHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             KK+P D  LW+   P EP W+    G GRPGWHIEC+ ++   LG  FD+ GGG DL+
Sbjct: 193 PGKKHPLDPALWRGEQPGEPSWDGGKLGPGRPGWHIECAVIARDGLGLPFDVQGGGADLL 252

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHE   + +         A + +H G L  +G KMSKS GN + ++ LL         
Sbjct: 253 FPHHEMSTSHARLLAGGA--ARVHVHAGLLAYDGHKMSKSRGNLVFVSRLLAAGT----- 305

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSA 354
                +RLA+L  HYRE  ++T   L  A+  L  W     S    G     VL A
Sbjct: 306 -DPMTVRLALLAHHYREEWEWTDVELRTAQRRLDTWTSAILSTHDDGEPADTVLDA 360


>gi|304373037|ref|YP_003856246.1| Cysteinyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309228|gb|ADM21708.1| Cysteinyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|330723349|gb|AEC45719.1| cysteinyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 400

 Score =  305 bits (781), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 129/418 (30%), Positives = 203/418 (48%), Gaps = 39/418 (9%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
            +YVCGPTVYD+ HIGN RP++  D+L R+ +Y+  E  + ++ NIT+IDDKII++A  E
Sbjct: 6   NIYVCGPTVYDYIHIGNLRPILTIDILNRVKKYFKYE--LFFLHNITNIDDKIIKKAILE 63

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                 N   + I+    + ++K         PT   + TN +  +   I  +   G  Y
Sbjct: 64  ------NKTEAEISEFYYKDYMKKLKLFNIQKPTKIVKVTNELNTIKNYIYLLQKQGFTY 117

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           + N+++ F+TS + NYG  S +KI+     ++     +K N  DF+LWK++T     + S
Sbjct: 118 QENDDLYFNTSKVKNYGHISGQKINSLVSSSK---TQYKSNANDFVLWKKTTLG-IKYYS 173

Query: 207 PWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
             G GRPGWH ECSA+   Y   +  DIH GG+DLIFPHHENE AQ     + +     W
Sbjct: 174 LLGLGRPGWHTECSALIFKYFNKQTIDIHSGGIDLIFPHHENENAQHFALTK-KNITKKW 232

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G + +   KMSKS  N   ++  +E        +   V R  +L +    PID T +
Sbjct: 233 VHVGQIKINNEKMSKSLNNVFLVDNFVE-------KYHPDVYRHILLTSSISGPIDLTNE 285

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--ESTKNHDLL- 382
            L   +  + ++ +      I     L  +YN       I  L   ++  ++ K  +LL 
Sbjct: 286 LLEANKNKIIQYKKAFFEHLINPRKSLKKVYNP------ILKLFLQSKFAQANKELNLLL 339

Query: 383 -----PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
                   +   ++LG     + LNK        L+++   L   K +  AD IR++L
Sbjct: 340 KNKDYANLSFIFNVLGFIFATKKLNKTDF----ALLEKWKKLKSEKNYQKADKIREKL 393


>gi|195488337|ref|XP_002092271.1| GE11760 [Drosophila yakuba]
 gi|194178372|gb|EDW91983.1| GE11760 [Drosophila yakuba]
          Length = 741

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 119/444 (26%), Positives = 179/444 (40%), Gaps = 89/444 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAY 254

Query: 147 EANNEIIFDTSSIPNYGSFSRRKI-------------DEQKMGTRVPEKYHKKNPADFIL 193
            ANN + FD +           K+              E  +         K++  DF L
Sbjct: 255 AANNSVYFDVNGFDKRDKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+
Sbjct: 375 AAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA---EILLSKW----------------PQTSTSKGIIDPA---- 350
             +++ +D++   +  A   E  L+++                 +   +   ++ A    
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQKK 487

Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
                  V +AL ++++T SA+ A+ +L   S                 ++        H
Sbjct: 488 FSHSQVQVHAALCDNIDTRSALDAIRELVSASNVYIRDNKTRLNSLLLRNVATYITDLLH 547

Query: 391 ILGI------------------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKF--- 425
           + G                   +     L   +   ++ L +     R     +K F   
Sbjct: 548 VFGAIAGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRNLVREQAKTLKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILEDYKNP 448
              D +R   L + G  LED    
Sbjct: 608 KLCDDLRDNVLPNLGVRLEDKDGG 631



 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII RARQ H     
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNHLFEAY 106


>gi|242001294|ref|XP_002435290.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215498620|gb|EEC08114.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 819

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 114/447 (25%), Positives = 182/447 (40%), Gaps = 94/447 (21%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            + +T    ++F KD T L  L P    R + ++P+++  +  I+  G  YE+   + FD
Sbjct: 205 FTKLTRHWEEEFYKDMTALNVLPPDVVTRVSEYVPEIVDYVAKIVEAGFGYESKGSVYFD 264

Query: 156 TSSIPN-----YGSF------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           T+         Y          R+ + E +    V     K+N  DF LWK S P EP W
Sbjct: 265 TARFDGDPGHFYAKLVPEAFGDRKALREGEGDLSVAGDDEKRNANDFALWKASKPGEPAW 324

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           +SPWG GRPGWHIECS M+S+ LG   DIH GG DL FPHH+NEIAQ+      +     
Sbjct: 325 DSPWGAGRPGWHIECSVMASNLLGSSLDIHTGGYDLKFPHHDNEIAQAEAYFGNDHWVRY 384

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H+G L + G KMSKS  NF++I + L       RS  A  +RLA L+  +++ +D++ 
Sbjct: 385 FLHSGHLTIAGCKMSKSLKNFVSIRDAL-------RSHSARRLRLAFLLHSWKDTLDYSD 437

Query: 325 QRLTEAEI--------------------------LLSKW-PQTSTSKGIIDPA---VLSA 354
             +  A                              +KW P+ +        A   V +A
Sbjct: 438 NTMESAAQWEKTFGEFFLNIKDVLRSAPMPDSIEAFAKWGPEEAGLNASFQDARAGVHAA 497

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SAHILGIEVCK 398
           L ++++T SA+++L                  A                   + G+   +
Sbjct: 498 LCDNIDTRSALESLRSAVTACNVYLKSKKASKAIPHAGLLKNVALYVTDILKVFGVAGEQ 557

Query: 399 EH-----------------LNKNISIAIEKLVQERLILLK-----------MKK-FSSAD 429
           E                    K ++  +E L + R  + +            +   +  D
Sbjct: 558 EAPTLGFGGGGNAGNSAVNEEKLVAPYLEVLAEFREGVRRLCRAAAGGKPESRDLLNLCD 617

Query: 430 YIRKQ-LESKGFILEDYKNPDNGQRMT 455
            +R   L   G  LED++      ++ 
Sbjct: 618 ALRDDVLPELGVRLEDHEEGAPAIKVV 644



 Score =  133 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 1/99 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++++YN+L R+   F       +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G
Sbjct: 23  PRLRLYNSLSREKEVFVPQTGKRVLWYNCGPTVYDASHMGHARSYISFDILRRVLADYFG 82

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
                YV NITDIDDKII RARQ +           + S
Sbjct: 83  YDIF-YVMNITDIDDKIIRRARQNYLLESYRSEKRSVAS 120


>gi|332267015|ref|XP_003282484.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic, partial
           [Nomascus leucogenys]
          Length = 656

 Score =  304 bits (780), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 97/342 (28%), Positives = 154/342 (45%), Gaps = 48/342 (14%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +      +F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 193 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            ++  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 253 VSSGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   ++   
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNENFY 485

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
           D   A+  AL ++++T + ++ +  L  +             
Sbjct: 486 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRK 527



 Score =  120 bits (301), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
               F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NIT
Sbjct: 28  TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNIT 86

Query: 74  DIDDKIIERARQEHPSIPINDAISIITS 101
           DIDDKII+RARQ H      +       
Sbjct: 87  DIDDKIIKRARQNHLFEQYREKRPEGAQ 114


>gi|194882631|ref|XP_001975414.1| GG20575 [Drosophila erecta]
 gi|190658601|gb|EDV55814.1| GG20575 [Drosophila erecta]
          Length = 741

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 118/444 (26%), Positives = 173/444 (38%), Gaps = 89/444 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAY 254

Query: 147 EANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            ANN + FD +                 YG     +  E  +         K++  DF L
Sbjct: 255 AANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+
Sbjct: 375 AAFNEAEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA--------------------------EILLSKWPQTSTSK--- 344
             +++ +D++   +  A                                W +   +    
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQKK 487

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
                  V +AL ++++T SA+ A+ +L   S                 ++        H
Sbjct: 488 FSNSQVQVHAALCDNIDTRSALDAIRELVSASNVYIRDNKTRLNSLLLRNVATYITDLLH 547

Query: 391 ILGI------------------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKF--- 425
           + G                   +     L   +   ++ L +     R     +K F   
Sbjct: 548 VFGAISGPRGGIGFPVTGGSGAQAAGADLETTVLPYVQSLAEFRNLVREQAKTLKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILEDYKNP 448
              D +R   L + G  LED    
Sbjct: 608 KLCDDLRDNVLPNLGVRLEDKDGG 631



 Score =  140 bits (354), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII RARQ H     
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNHLFEAY 106


>gi|19115476|ref|NP_594564.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1351621|sp|Q09860|SYC_SCHPO RecName: Full=Probable cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1044932|emb|CAA91428.1| putative cysteinyl-trna synthetase [Schizosaccharomyces pombe]
 gi|6723893|emb|CAB66469.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 754

 Score =  304 bits (779), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 152/355 (42%), Gaps = 63/355 (17%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
              + +     F KD   L  L PT   R + ++P+++  +Q II  G+AY   +  + F
Sbjct: 218 FRKLAAYWEDDFNKDMANLNVLPPTAVTRVSEYVPEIVDFVQRIIDRGYAYPVTDGSVYF 277

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------KKNPADFILWKRSTPMEPGWE 205
           DT +    G     K++    G R               KK P DF LWK S P EP W+
Sbjct: 278 DTEAFEK-GGHFYAKLEPWNKGNRELIAEGEGSLAALTGKKRPGDFALWKASKPGEPSWD 336

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPW +GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS       +  N +
Sbjct: 337 SPWSKGRPGWHIECSVMASALLGSNIDIHSGGIDLAFPHHDNELAQSEAYFDCPQWVNYF 396

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
            H G L++EG+KMSKS  NFITI E+L       + +    +RLA L+  +   +DF   
Sbjct: 397 FHAGHLHIEGQKMSKSLKNFITIKEIL-------KKFTPRQLRLAFLLQQWNTQLDFKET 449

Query: 326 RLT---EAEILLSKWPQT-----------STSKGIIDPAVLS------------------ 353
            L      E  L  + +T           S + G +                        
Sbjct: 450 LLAYVLNIEQALENFFRTVRALMNETEGVSANGGHVPEKFDKLEIELLEKFQQTQQNTHL 509

Query: 354 ALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHILGIE 395
           AL +  NT   +Q +  L  ++                  +     +   I G++
Sbjct: 510 ALCDSFNTPLVMQHIDNLVTQANIYIREVGQQPCSRLLGQIASWITSMLQIFGLD 564



 Score =  124 bits (311), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 8/125 (6%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++ +YNTL      F + + SN+  Y CGPTVYD +H+G+AR  +  D+L R+L+ Y+
Sbjct: 18  RTELYVYNTLTHSKVPFVS-NGSNLTWYCCGPTVYDASHMGHARNYVTTDILRRILQSYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI------NDAISIITSKNTQQFVKDTTRLA 115
           G   +T+V+N+TDIDDKII RARQ++           N + S    K T+ +     +  
Sbjct: 77  GYN-ITFVQNVTDIDDKIILRARQQYLFEEYKKQQGTNKSHSEAREKVTEAWFAYAKKNL 135

Query: 116 CLAPT 120
              P+
Sbjct: 136 PEPPS 140


>gi|229820734|ref|YP_002882260.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Beutenbergia cavernae DSM 12333]
 gi|310947174|sp|C5BVB1|MSHC_BEUC1 RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|229566647|gb|ACQ80498.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Beutenbergia cavernae DSM 12333]
          Length = 420

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 113/380 (29%), Positives = 172/380 (45%), Gaps = 34/380 (8%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +++++ +T   ++T   A       MYVCG T YD  H+G+A   + FD+L R  R   
Sbjct: 19  PREVRVRDTATGELTP--AGHDGRASMYVCGITPYDSTHLGHANTYVSFDLLVRAWRDAG 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               VTYV+N+TD+DD ++ERA               + +   + F  D   L  +AP H
Sbjct: 77  L--AVTYVQNVTDVDDPLLERAAA------TGVDWRQLAADQIELFHHDMVALRVVAPEH 128

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNE--------IIFDTSSIPNYGSFSRRKIDEQ 173
              A   +P ++  ++ ++    AY             +    S+ P +GS       E 
Sbjct: 129 YIGAVESVPDVVRAVERMLADRAAYRVGAAADGAGDGDVYAALSADPRFGSLGSLDEAEM 188

Query: 174 KM--GTR--VPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLG 228
               G R   P++  K+ P D +LW+     EP W     GRGRPGWHIEC+ +++ +LG
Sbjct: 189 LELFGERGGDPDRLGKQAPLDPLLWRVEREEEPSWPGESLGRGRPGWHIECATIAARFLG 248

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FD+ GGG DL FPHHE   +           A   +H G +  +G KMSKS GN + +
Sbjct: 249 VPFDVQGGGTDLEFPHHEMSESHLRVLTATAHPARAHVHGGMVAYQGHKMSKSRGNLVFV 308

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----S 343
           +EL+ +            +RL +L  HY E  ++    L  AE  L+ W          S
Sbjct: 309 SELVAS------GVDPMAVRLVILAHHYAEDWEYEAGALGLAEERLATWRAALAQGSGPS 362

Query: 344 KGIIDPAVLSALYNDLNTVS 363
              +   V +AL NDL+   
Sbjct: 363 GADVVAGVRAALANDLDAPG 382


>gi|328351033|emb|CCA37433.1| cysteinyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 741

 Score =  304 bits (778), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 124/464 (26%), Positives = 196/464 (42%), Gaps = 89/464 (19%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+ NI D+   + E  +    ++   +     +S   Q++ +D  RL  L  T   R +
Sbjct: 179 EYLENIKDV--VVPELDKLYGSTVTDPEIFKQTSSYWEQRYDEDMERLNILPATVTTRVS 236

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI-----PNYGSF---SRRKIDEQKMGT 177
            ++P+++  +Q II  G+AY   +  + FDT+        +Y      ++  ++  K G 
Sbjct: 237 EYVPEIVEFVQGIIDRGYAYVTKDGSVYFDTTQFDTNEKHDYAKLQPWNKADLELLKEGE 296

Query: 178 -RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +     K+N ADF LWK S P EP W+SPWG+GRPGWHIECS M+S   G+  DIH G
Sbjct: 297 GSLSSNDGKRNSADFALWKSSKPGEPSWKSPWGQGRPGWHIECSVMASDITGESMDIHSG 356

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHH+NE+AQS      ++  N ++H G L++EG+KMSKS  NFITI+E L    
Sbjct: 357 GIDLAFPHHDNELAQSEARFDCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEALS--- 413

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
                + A  +RL   +  +   +DF    L E   + + +                   
Sbjct: 414 ----KYSARQLRLCFALVQWNNQLDFKESLLNEVRSIEATFNNFFNNVRGLNNDYNSKLA 469

Query: 338 -------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
                            T    +   V S+  ++L+T   +++L  L +ES      +  
Sbjct: 470 SGQIISKKFGPAEKNLLTKLSEVQAKVYSSFCDNLSTPQVVRSLLDLIQESNNYISAIGT 529

Query: 385 -------------FNASAHILGIEVCKEHL---------------NKNISIAIEKLVQER 416
                              +LG +   ++L                  +   ++ L   R
Sbjct: 530 EIRVQPLLQTAFYITRILSVLGFQNRPDNLGWINEDQQDGQGSNREDTVLPFVQALSSFR 589

Query: 417 LILLKM-------KKFSSA-DYIRK-QLESKGFILEDYKNPDNG 451
             + K        K F  A D IR   L   G +L D +N  N 
Sbjct: 590 DFVRKSAISKDDYKVFLDATDKIRDVDLLKLGVVL-DDRNGQNA 632



 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +K++N+L R    F   + + +  Y CGPTVYD +H+G+AR  +  D+  R+L+ ++
Sbjct: 15  RPVLKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMGHARNYVTIDINRRILQDFF 74

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           G   + +V+N+TDIDDKII +ARQE+     +   S IT
Sbjct: 75  GYN-IKFVQNVTDIDDKIILKARQEYLFKEFSKKYSEIT 112


>gi|320165586|gb|EFW42485.1| cysteinyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 727

 Score =  303 bits (777), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 122/422 (28%), Positives = 180/422 (42%), Gaps = 81/422 (19%)

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI 159
                +QF  D   L  L P    R +++I ++I  ++ +I +G+AY +N  + F T+S 
Sbjct: 197 ARYWEEQFNIDMKALHILEPDRLTRVSDYIDEIIEFVEKVIGNGYAYASNGSVYFSTTSF 256

Query: 160 -----PNYGSF-------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
                 +Y          +    + +   +       KK+P DF LWK+S   EP W+SP
Sbjct: 257 DQNKGHHYAKLVPEAVGNAASLAEGEGELSATDAGSDKKHPNDFALWKKSKAGEPAWDSP 316

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           WG+GRPGWHIECSAM+   +G   DIHGGG+DL FPHH+NEIAQS      ++  N ++H
Sbjct: 317 WGKGRPGWHIECSAMAGKVIGSTLDIHGGGIDLKFPHHDNEIAQSEAFFDNKQWINYFMH 376

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
            G L +EGRKMSKS  NFITI E LE       ++ A  IR+  L+  + + +D++   +
Sbjct: 377 TGHLAIEGRKMSKSLKNFITIREALE-------AYTARQIRIMFLLHAWNKGLDYSKSTM 429

Query: 328 TEA--------------EILLSKWP---------QTSTSKGIIDPAVLSALYNDLNTVSA 364
           TEA              +  L   P                    A+  A  N +NT + 
Sbjct: 430 TEAISVEKSFNEFFLNIKAALQSAPANKFVAADEALEAKLRATKQAIHEAFLNSINTPAV 489

Query: 365 IQALHKLAREST----------KNHDLLPIFNASAHIL---GIEVCKEHLN--------K 403
              L  L   +           K++ L  + N +  IL   G+                 
Sbjct: 490 FGHLQDLVSATNTYLNTPGNVPKSNILRGVGNFATWILSVVGVIPNGRAGEIGFPIGGAD 549

Query: 404 NISIAIEKL-----VQE-----RLILLKMKKFSSA-----DYIRKQ-LESKGFILEDYKN 447
             S  I  L     +       R      K  ++A     D +R + L   G  LED + 
Sbjct: 550 GASADIVLLPAAKTIAAFRDVVRKEARASK--ATALLQACDALRDETLPQLGIRLEDVEG 607

Query: 448 PD 449
            D
Sbjct: 608 GD 609



 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 36/92 (39%), Positives = 60/92 (65%), Gaps = 1/92 (1%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           ++  ++++N+L R++ EF   + + +  Y+CGPTVYD +H+G+A   I FDV+ R+L  Y
Sbjct: 18  VRTGLRLHNSLTREVDEFIPANGNTVNAYICGPTVYDASHMGHASTYIQFDVIRRVLADY 77

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           +    + +V NITD+DDKII +AR+ H     
Sbjct: 78  F-HYDMRWVMNITDVDDKIILKARRNHLFEEY 108


>gi|146080697|ref|XP_001464062.1| cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 784

 Score =  303 bits (777), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 131/455 (28%), Positives = 183/455 (40%), Gaps = 88/455 (19%)

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
            D + ER+        I +       K  + F +D  RL    P    R T ++PQ++  
Sbjct: 215 GDLLDERSGHSVSDQQIFEDH---ARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEF 271

Query: 136 IQNIILHGHAYEANNEIIFDTSSI----PNYGSFS-----RRKIDEQKMGTRV---PEKY 183
           +Q II +G AY     + FDT +      +Y             DE   G  V     + 
Sbjct: 272 VQKIIDNGFAYVGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEG 331

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            K++P DF LWK S P EP W SPWG GRPGWHIECS M+S  LG+  DIH GG DL FP
Sbjct: 332 EKRSPNDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFP 391

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HH+NE AQS   +   +  N ++H G L+++G KMSKS  NFITI + L+      R   
Sbjct: 392 HHDNECAQSEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDELGVTAR--- 448

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------D 348
              +RL  L   + +P++F+ Q L EA+           S  I+               D
Sbjct: 449 --TMRLLFLANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRTDNWKATQGANKHD 506

Query: 349 PAVLSA-----------LYNDLNTVSAIQALHKLARESTKN------------HDLLPIF 385
             +LS            L ++ +TV A+Q L  L   + +               +    
Sbjct: 507 RELLSKWVEAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYV 566

Query: 386 NASAHILG-------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKKFSS------- 427
                I G       + + K+      +  IE    LV+ R  +    K           
Sbjct: 567 TKMFRIFGVVEGSDDVGLQKQGSGDGEARFIEVVNTLVRFRDEVRDAAKDHKVGGGLPAL 626

Query: 428 ----ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
               A   R+ L   G  LED          T WK
Sbjct: 627 VRQGA---REWLVDAGVRLEDNPAGP-----TTWK 653



 Score =  119 bits (298), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 10/113 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             +K+ N+L   + +F   D   +R Y CGPTVYD +H+G+AR  + FD++ R++  Y+G
Sbjct: 36  NGLKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRVMEDYFG 95

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              V Y  NITDIDDKII+RAR         +          +    D  RL 
Sbjct: 96  -YSVIYQMNITDIDDKIIKRARVNKLLDDFKEG---------ELRHGDVARLM 138


>gi|302848858|ref|XP_002955960.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
           nagariensis]
 gi|300258686|gb|EFJ42920.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
           nagariensis]
          Length = 650

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 115/454 (25%), Positives = 188/454 (41%), Gaps = 82/454 (18%)

Query: 69  VRNITDIDDKIIERA--RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           V  + D+    +  A  R+   ++          +K  ++F++D   L C  P    R +
Sbjct: 188 VDALIDLGGDYVAEALDRELGAAVTDPSVFRAHAAKYEREFLEDMDALGCRRPDVLTRVS 247

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKIDEQKMGTRVP-- 180
            ++P+++  +Q I+ +G AY +N  + FDT +       YG  +   +    +       
Sbjct: 248 EYMPEIVNYVQRILDNGMAYVSNGSVYFDTQNFRACGHTYGKLNPWAVGSAALAAEGESN 307

Query: 181 -EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K++  DF LWK S P EP W+SPW +GRPGWHIECSAM+S  +G   D+H GG D
Sbjct: 308 FETSEKRSLQDFALWKASKPGEPVWDSPWSQGRPGWHIECSAMASTIIGSRLDLHSGGED 367

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH+NE+AQ+      E   N ++H G L++EG KMSKS  NFITI E L+T     
Sbjct: 368 LRFPHHDNELAQAEAYYHTEWWVNYFLHCGHLHIEGLKMSKSLKNFITIREALQT----- 422

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------ 347
             + A  +RL  ++  + + + +  Q   E +   ++      +                
Sbjct: 423 --FNARQLRLMFVLQPWNKTMMYGEQARAEMKAREAQLKNFFQNVEAAVRGQDICTTEQR 480

Query: 348 ---------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------ 380
                            AV  AL +++NT +A+ AL +L +   K  +            
Sbjct: 481 WQPEDFELNSRILGAQTAVDLALRDNINTPAAMDALSELIKAVNKYLEKKVGAARPLLLR 540

Query: 381 -LLPIFNASAHILGIEV-------------CKEHLNKNISIAIEKLVQERLIL------- 419
                      + G+                   ++   S  ++ LV  R  +       
Sbjct: 541 KAASYVTRILSVFGLVDGPGDRYSTWQLASPSAKVSAGTSRYLDALVAFRQEVCAMAAAA 600

Query: 420 ---LKMKKFSSADYIRKQ-LESKGFILEDYKNPD 449
               ++   ++ D +R Q L   G  LED     
Sbjct: 601 AEPREV--LAACDRLRDQTLVDLGVRLEDRPEGT 632



 Score =  117 bits (293), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 2   KKKIKIYNTLERKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
              + +YN+   +   F  +   +   I  Y CGPTVYD AH+G+AR  + FD++ R+L 
Sbjct: 21  TAPLMLYNSFVDEKVPFVPVAGPNSRQITWYACGPTVYDVAHMGHARNYLSFDIVRRVLE 80

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
            Y+G  C+  V N+TD+DDKII RAR+ +       +      ++T++   D
Sbjct: 81  DYFGYNCL-MVMNVTDVDDKIILRARRNYLLAQYKRSGKTP-DEHTEERHVD 130


>gi|254567071|ref|XP_002490646.1| Essential protein of unknown function [Pichia pastoris GS115]
 gi|238030442|emb|CAY68366.1| Essential protein of unknown function [Pichia pastoris GS115]
          Length = 761

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 124/464 (26%), Positives = 196/464 (42%), Gaps = 89/464 (19%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y+ NI D+   + E  +    ++   +     +S   Q++ +D  RL  L  T   R +
Sbjct: 199 EYLENIKDV--VVPELDKLYGSTVTDPEIFKQTSSYWEQRYDEDMERLNILPATVTTRVS 256

Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI-----PNYGSF---SRRKIDEQKMGT 177
            ++P+++  +Q II  G+AY   +  + FDT+        +Y      ++  ++  K G 
Sbjct: 257 EYVPEIVEFVQGIIDRGYAYVTKDGSVYFDTTQFDTNEKHDYAKLQPWNKADLELLKEGE 316

Query: 178 -RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +     K+N ADF LWK S P EP W+SPWG+GRPGWHIECS M+S   G+  DIH G
Sbjct: 317 GSLSSNDGKRNSADFALWKSSKPGEPSWKSPWGQGRPGWHIECSVMASDITGESMDIHSG 376

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+DL FPHH+NE+AQS      ++  N ++H G L++EG+KMSKS  NFITI+E L    
Sbjct: 377 GIDLAFPHHDNELAQSEARFDCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEALS--- 433

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
                + A  +RL   +  +   +DF    L E   + + +                   
Sbjct: 434 ----KYSARQLRLCFALVQWNNQLDFKESLLNEVRSIEATFNNFFNNVRGLNNDYNSKLA 489

Query: 338 -------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
                            T    +   V S+  ++L+T   +++L  L +ES      +  
Sbjct: 490 SGQIISKKFGPAEKNLLTKLSEVQAKVYSSFCDNLSTPQVVRSLLDLIQESNNYISAIGT 549

Query: 385 -------------FNASAHILGIEVCKEHL---------------NKNISIAIEKLVQER 416
                              +LG +   ++L                  +   ++ L   R
Sbjct: 550 EIRVQPLLQTAFYITRILSVLGFQNRPDNLGWINEDQQDGQGSNREDTVLPFVQALSSFR 609

Query: 417 LILLKM-------KKFSSA-DYIRK-QLESKGFILEDYKNPDNG 451
             + K        K F  A D IR   L   G +L D +N  N 
Sbjct: 610 DFVRKSAISKDDYKVFLDATDKIRDVDLLKLGVVL-DDRNGQNA 652



 Score =  132 bits (333), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +K++N+L R    F   + + +  Y CGPTVYD +H+G+AR  +  D+  R+L+ ++
Sbjct: 35  RPVLKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMGHARNYVTIDINRRILQDFF 94

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           G   + +V+N+TDIDDKII +ARQE+     +   S IT
Sbjct: 95  GYN-IKFVQNVTDIDDKIILKARQEYLFKEFSKKYSEIT 132


>gi|326436995|gb|EGD82565.1| cysteinyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 708

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 118/437 (27%), Positives = 182/437 (41%), Gaps = 78/437 (17%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            +++  ++  +   S ++ K   +F +D   L   AP    R T  +P++   +Q II +
Sbjct: 173 DKRKGSTVSDHSIFSSVSRKWEAEFHRDMNALNVEAPDVLKRVTECVPEIAAFVQRIIDN 232

Query: 143 GHAYEANNEIIFDTSSI-----PNYGSF-----SRRKIDEQKMGTRVPEKYHKKNPADFI 192
           G+ YEAN  + FD ++       NY        +  K  E+  G        K++ +DF 
Sbjct: 233 GYGYEANGSVYFDVAAFRGSSEHNYPKLLPEAAANAKALEEGEGALSSGAGDKRSQSDFA 292

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           LWK S P EP W SPWG+GRPGWHIECS M+S  L    DIH GG+DL FPHH+NE AQS
Sbjct: 293 LWKASKPGEPAWPSPWGQGRPGWHIECSVMASSVLNDNMDIHSGGVDLKFPHHDNECAQS 352

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                 +K  N +IH+G L++EG KMSKS  NFITI E L+        + A  IRL  L
Sbjct: 353 EAYYGNDKWVNYFIHSGHLHIEGHKMSKSLKNFITIKEALD-------QYTARQIRLMFL 405

Query: 313 MTHYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGI 346
           + +++  +D++   +  A   E + +++                                
Sbjct: 406 LHNWKATLDYSSHSMMTAISYEKMFNEFFLNVSSALYGADPFSFFKPDAEDRAILQQFKA 465

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLPI-------------FNASAH 390
               + +AL + ++T   +Q   +L        K  +                 F     
Sbjct: 466 TKQHIHNALCDSIDTPLVMQLSKQLITAVNVYIKEKEAAGSAPQAALLRQIGRYFTELLA 525

Query: 391 ILGIEVCKEHL--------NKNISIAIEKLV-------QERLILLKMKK---FSSADYIR 432
           + G+    E +               + +L+         R   L  K        D IR
Sbjct: 526 LFGVVETPEEIGFHAAGAQGSMEDAVLPQLLAFAHTREAVRQTALTKKDKAVLKMCDEIR 585

Query: 433 -KQLESKGFILEDYKNP 448
             +L + G  LED +  
Sbjct: 586 DDELPNVGVRLEDKEQG 602



 Score =  133 bits (335), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 1/118 (0%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            +++++N+  R+   F   + + +  Y CGPTVYD +H+G+AR  I FD++ R+LR Y+ 
Sbjct: 7   PQLQLFNSYTRQKEVFVPRERNRVTWYGCGPTVYDASHMGHARAYITFDIMRRVLRDYFK 66

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             C  YV NITD+DDKII RARQ H         ++      Q   +   RL      
Sbjct: 67  YDC-EYVMNITDLDDKIILRARQNHLFEQYIAQETLDRDTVLQDIKEALERLDVKIAD 123


>gi|219122536|ref|XP_002181599.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406875|gb|EEC46813.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 373

 Score =  303 bits (776), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 111/362 (30%), Positives = 168/362 (46%), Gaps = 50/362 (13%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV----------------TYV 69
           I  Y CGPTVY  AH+G+AR  +  D++ R+L + Y +                    +V
Sbjct: 1   IAFYTCGPTVYAPAHLGHARTYVCLDIVRRVLEHQYAQHRGGSSNSTMPSSPVPPPPLFV 60

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
            N+TD+DDKI+  A     +  +  +   +       F  D  RL  L P    R T H+
Sbjct: 61  MNVTDVDDKILATAAARDETDSL-SSPLALARHYEAAFWSDLDRLNVLRPHVVTRVTEHV 119

Query: 130 P-QMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-------YGSFSRRKIDEQKMGTRVP 180
              ++  IQ ++ +G AY   + ++ FD  +  +       YG  +   +      +R+ 
Sbjct: 120 ETAILPYIQRLVDNGTAYCATSGDVYFDVRAFEDRTNARTRYGKLAP-PVSATDFYSRLD 178

Query: 181 EKYH--KKNPADFILWKRSTPMEP-GWESP-WGRGRPGWHIECSAMSSHY-----LGKVF 231
           +     K++P DF+LWKR    E   W +P WG GRPGWHIECSAM             F
Sbjct: 179 QTAETVKRDPRDFVLWKRRKEGEALFWTAPVWGEGRPGWHIECSAMIQAVQEQFQQTHRF 238

Query: 232 DIHGGGLDLIFPHHENEIAQSCCA------------DRIEKTANIWIHNGFLNLEGRKMS 279
            +H GG+DL FPHH NEIAQ+                 +++    WIH G ++++G KMS
Sbjct: 239 VVHAGGVDLQFPHHTNEIAQAEAHVLPDLDNVTDTTLPVQEWIPHWIHTGHVHIDGLKMS 298

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEILLSKW 337
           KS  NF++I ELL+       S PA   RL  L     YR P  ++   ++++  +  K 
Sbjct: 299 KSLKNFVSIEELLQDDNPSSLSSPADDFRLWCLGMSGSYRGPATYSRDAVSQSSHVREKL 358

Query: 338 PQ 339
            +
Sbjct: 359 VR 360


>gi|321252445|ref|XP_003192408.1| cysteine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458876|gb|ADV20621.1| Cysteine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 785

 Score =  303 bits (776), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 115/469 (24%), Positives = 181/469 (38%), Gaps = 94/469 (20%)

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V    D+    +   +  H           + S     F  D  RL  L P    R + +
Sbjct: 216 VEGAADVLGPYLGE-KLGHTIADPIAVCRRLASYWENAFFTDMARLRVLPPDTITRVSEY 274

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSI---------PNYGSF-----SRRKIDEQK 174
           +P+++  +Q I+ +G AYE    + FD +             Y          +K+ ++ 
Sbjct: 275 VPEIVSFVQRIVDNGFAYEGGGSVWFDVNKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEG 334

Query: 175 MGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            G        K+ PADF LWK  S P EP W SPWG GRPGWHIECS M+S  LG   D+
Sbjct: 335 EGALT-GSQGKRRPADFALWKAKSKPGEPAWPSPWGEGRPGWHIECSVMASAILGSGMDV 393

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H GG+DL+FPHH+NE+AQ+      ++  N ++H G L++EG KMSKS  NFITI+E L+
Sbjct: 394 HSGGVDLMFPHHDNELAQAEAYHGCKQWVNYFLHTGHLHIEGLKMSKSLKNFITIDEALQ 453

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------- 339
           T       + A  +RLA ++  +   +DF    + + +     +                
Sbjct: 454 T-------YSARQLRLAFMLQIWNAKLDFKKDLIVDTKAKEETFDNFFTNVRARMSDAAA 506

Query: 340 -----------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------ 376
                              T          +AL +  NT +AIQ L  L           
Sbjct: 507 LGSNEDGKHHYEEAEKSLMTDLHKAQNDFRAALCDSFNTPAAIQILLDLISSVNLYFASR 566

Query: 377 -KNHDLLPIF------NASAHILGI-----------------EVCKEHLNKNISIAIEKL 412
            + +++ P+            + G+                 E         +   +  +
Sbjct: 567 GREYNIAPVVTIAQWITRMLRMFGLGEGDVTSGQIGWGKEGDEAAGGDFEGKLDPYLRAM 626

Query: 413 VQERLILLKM--------KKFSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
              R  + ++        +     D  R Q L + G  L+D ++   G 
Sbjct: 627 ASFRDDIRRLAIEGATAGEILKLCDKFRDQDLANLGIQLDDGQSATGGA 675



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 1/127 (0%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           +  +++YN+L R    F   +   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y+
Sbjct: 22  EPALRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQDIIRRILRDYF 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V +V N+TDIDDKII RAR+ +       +   +T +         T+        
Sbjct: 82  -NYDVNFVMNVTDIDDKIILRARESYLLDQAISSNPALTPQLISDVEAAFTKYIAKPLKS 140

Query: 122 QPRATNH 128
            P    H
Sbjct: 141 LPTPLEH 147


>gi|303286934|ref|XP_003062756.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226455392|gb|EEH52695.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 724

 Score =  302 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 117/462 (25%), Positives = 191/462 (41%), Gaps = 105/462 (22%)

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
             I DA   +  +   +F+ D   L  + P    R + ++ +++  IQ I+  G AYE+N
Sbjct: 161 WSIQDAYLTLAKRFEDEFMGDMASLNVMRPDALTRVSEYVDKIVSYIQRIVDRGFAYESN 220

Query: 150 NEIIFDTSSI-----PNYGSFSRRKIDEQK-------MGTRVPEKYHKKNPADFILWKRS 197
             + FD  +        Y   ++  + E +        G    +   KK+  DF+LWK S
Sbjct: 221 GSVYFDVPTFEKDANHKYAKLNKAALAEDEVEAAMDGEGALAADASEKKDAHDFVLWKAS 280

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
            P EP W SPWG GRPGWHIECSAM S  LG+  DI+GGG+DL FPHHEN++AQS     
Sbjct: 281 KPGEPSWASPWGEGRPGWHIECSAMCSDVLGEAVDINGGGIDLNFPHHENQLAQSEAFYD 340

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
           +++  N ++H+G L+++G KMSKS  NFITI   L+        + A  +R   L+  + 
Sbjct: 341 VKQWVNYFVHSGHLHIDGLKMSKSLKNFITIRAALKM-------YTARQLRFLFLLHQWS 393

Query: 318 EPIDFTV---QRLTEAEILLSKWPQ-------------------------------TSTS 343
           +P+D T      +  A I    + +                                S +
Sbjct: 394 DPMDLTPAFGDAMDAAVIAEKTFAEFFHAVKGVLRNSGPGGYDANRAQTWNENERALSDA 453

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLPIFNASAH-----IL 392
             +   A  +A+ +++NT + I+AL +L   +          D+ P+  ++A      IL
Sbjct: 454 VDVARAATHAAMIDNVNTPAVIKALKELVSATNAYLGKTAKEDVRPLIVSAAAQFVTTIL 513

Query: 393 G-------------------------------IEVCKEHLNKNISIAIEKLVQERLILLK 421
                                               +E L   + + ++   + R +   
Sbjct: 514 STLGVAEAGGGGAVGFGDVGGDAGGGDGDAGAGAGKEETLAPALDLIVKFRDEIRALAKS 573

Query: 422 MKK----FSSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
                   ++ D +R   L + G  L+D  +         WK
Sbjct: 574 GADASALMAACDALRDDGLPTLGVKLDDRADG-----GALWK 610



 Score =  117 bits (293), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 1/101 (0%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           ++ NT  +  T F  +D + +  Y+CGPTVYD AH+G+AR  + FDVL R++  Y+    
Sbjct: 11  RLMNTFTKTKTPFVPLDGNRVGWYICGPTVYDSAHMGHARNYVNFDVLRRVVTEYF-RYD 69

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
           V +V N+TDIDDKI+ RA Q      +  A   + +     
Sbjct: 70  VRFVMNVTDIDDKIVMRAHQRRSEEVLALAEKTLGASGLDA 110


>gi|47213255|emb|CAF92916.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 852

 Score =  302 bits (775), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 123/498 (24%), Positives = 189/498 (37%), Gaps = 131/498 (26%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            RQ    +  N     +     ++F KD   L  L P    R + ++P+++  +  +I +
Sbjct: 242 DRQAGSQVTENSIFFSLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVAKVISN 301

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKI-------------DEQKMGTRVPEKYHKKNPA 189
           G+ YE+N  + FDT+        S  K+              E  +         KK+P 
Sbjct: 302 GYGYESNGSVYFDTAKFDASPQHSYAKLVPEAVGDQKALQEGEGDLSVSAERLSEKKSPN 361

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S P EP W+SPWG+GRPGWHIECSAM+   LG+  D+HGGG DL FPHH+NE+
Sbjct: 362 DFALWKASKPGEPSWDSPWGKGRPGWHIECSAMAGTVLGESMDVHGGGFDLRFPHHDNEL 421

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS      +     ++H G L + G KMSKS  NFITI E L           A  +RL
Sbjct: 422 AQSEAFFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKEALAKN-------TARQLRL 474

Query: 310 AMLMTHYREPIDFTVQRLTEA---EILLS------------------------------- 335
           A LM  +++ +D++   +  A   E  L+                               
Sbjct: 475 AFLMHSWKDTLDYSSNTMESAVQYERFLNVGGRPQVAADALCLSLTCRDAAQEFFLNVKD 534

Query: 336 ----------KWPQTSTSKGIIDPAVL-------SALYNDLNTVSAIQALHKLARESTKN 378
                     ++ +   ++  ++ +          AL ++++T +A++ +  L  +S   
Sbjct: 535 VLRAPTDVAGRFQKWEAAEAELNSSFFDRKSAVHEALCDNVDTRAAMEEMRLLVGQSNSY 594

Query: 379 HD-------------LLPIFNASAHILGIEVCKEHLNK-----------NISIAI----- 409
                          L  I     H+L I    E L             ++  A+     
Sbjct: 595 MASRKNARSSPNRMLLESIARYLTHMLKIFGAVEELASIGFPVGQKENMDLESAVMPYLS 654

Query: 410 ---EKLVQERLILLKMK-----------------------KFSSADYIRKQ-LESKGFIL 442
              +     R I  + K                            D +R   L   G  L
Sbjct: 655 VLSDFRADVRKIAREQKGEGTRGFGVGGVLQNPPFCAVTPLLQLCDAVRDDTLPELGVRL 714

Query: 443 EDYKN----PDNGQRMTR 456
           ED++     P  G R  R
Sbjct: 715 EDHEGDGALPLPGVRGPR 732



 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 54/151 (35%), Gaps = 53/151 (35%)

Query: 3   KKIKIYNTLERKIT------------EFQAIDPSNIRMYVCG---PT-------VYDFAH 40
            ++++YN+L R                FQ + P  I     G   P+       V   AH
Sbjct: 18  PRLRLYNSLTRAKVRGRPPDADAALVPFQRLIPELIPALCSGAVRPSERQQSHLVQLRAH 77

Query: 41  -----------IGNA-------------------RPMIVFDVLYRLLRYYYGEKCVTYVR 70
                      + +A                   R  I FD+L R+LR Y+ +  V Y  
Sbjct: 78  GVRRLTHGTRQVRHAHTRTHTRALTHTLTPSPPRRSYISFDILRRILRDYF-KYEVFYCM 136

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITS 101
           NITDIDDKII+RARQ        +       
Sbjct: 137 NITDIDDKIIKRARQNFLLDQYKEKGPQAAQ 167


>gi|187631650|sp|Q4A786|SYC_MYCH7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|144575567|gb|AAZ54003.2| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 406

 Score =  302 bits (774), Expect = 7e-80,   Method: Composition-based stats.
 Identities = 130/422 (30%), Positives = 199/422 (47%), Gaps = 35/422 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 6   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 63

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++      +  + + +T K T ++ K         PT   R T  I ++I  I+ + 
Sbjct: 64  EKAQE------LGISEAELTEKYTNEYFKILEIFNIKKPTKIVRVTEKIEKIIEYIKLLE 117

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK++  
Sbjct: 118 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESL----LDKNTKKTKSNNDFVLWKKTQK 173

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 174 G-LFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 231

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS  N +   +           +   +IR   L  +   
Sbjct: 232 NPIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTV 284

Query: 319 PIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           PI+ T + +   + L+ K+ +         K      V   L   L         + L  
Sbjct: 285 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLN--LFIEGKFAKANFLIM 342

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           E  K  +   I     + L     K  L+       ++ ++    L+  K +S AD IR+
Sbjct: 343 ELIKQKENSTIRKIFLN-LRFNFTKMRLDPES----QEKIKNWNKLIMDKNYSEADKIRE 397

Query: 434 QL 435
           +L
Sbjct: 398 EL 399


>gi|220912666|ref|YP_002487975.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|310947172|sp|B8H8K8|MSHC_ARTCA RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|219859544|gb|ACL39886.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Arthrobacter chlorophenolicus A6]
          Length = 410

 Score =  302 bits (774), Expect = 8e-80,   Method: Composition-based stats.
 Identities = 106/375 (28%), Positives = 162/375 (43%), Gaps = 39/375 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I++++T        +        MYVCG T YD  H+G+A   + FD+L R  R    
Sbjct: 2   PAIRLFDTAAGHEVLLE--SGDRPSMYVCGITPYDATHMGHAASYVAFDLLNRAWRDAG- 58

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K V YV+N+TD+DD ++ERA         N     +       F  D   L  L+P H 
Sbjct: 59  -KDVDYVQNVTDVDDPLLERA------TATNVDWRDLAQSQIDLFQTDMEALNVLSPDHY 111

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNY---------GSFS 166
             A   I  ++  ++ ++  G AY       E + ++ +D  +             GS S
Sbjct: 112 VGAVESISLIVPQVERLVSQGLAYTVPGTNGEPDGDVYYDVEAAGKQSVAPDAWSLGSIS 171

Query: 167 RRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSA 221
                E           P +  K+   D +LW+ +   EP W     G GRPGWHIEC+ 
Sbjct: 172 GLSESEMLELFAERGGDPGRSGKRQALDPLLWRVARDGEPSWPGASLGDGRPGWHIECTV 231

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           ++  YL   F + GGG DLIFPHHE     +     +   A  + H G + L+G KMSKS
Sbjct: 232 IAQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLAGV-PLARHYAHAGMVGLDGEKMSKS 290

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GN + +++L    +          IRLA+L  HYR    +T +    A+  L+ W +  
Sbjct: 291 KGNLVLVSKLRAAGE------NPAAIRLAILAHHYRSDWSWTDEGFAAAKADLAAWRRAL 344

Query: 342 T-SKGIIDPAVLSAL 355
             +      A++  +
Sbjct: 345 DHAPQGSAAALVEEM 359


>gi|207092910|ref|ZP_03240697.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 332

 Score =  302 bits (773), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 104/344 (30%), Positives = 155/344 (45%), Gaps = 47/344 (13%)

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWE 205
            +N +I  DTS   +YGS S           R+     K+   DF+LWK      + G++
Sbjct: 3   VSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFD 60

Query: 206 SPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           SP G+GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ CA  +E 
Sbjct: 61  SPLGKGRPGWHIECSSMIFKTLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGVE- 119

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  W+HNGF+N+   KMSKS GN   I + L       +++   ++R  +L  HYR  +
Sbjct: 120 LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVL 172

Query: 321 DFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV----LSALYNDLNTVSAIQALHKLA 372
           +F  + L  ++  L K  +       + G I+P      L  + +DLN   A+  L  + 
Sbjct: 173 NFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQDDLNVSKALSVLESML 232

Query: 373 RESTKNHD-----------LLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQE 415
             + +  D           +L        +LGI             +++    IE  ++E
Sbjct: 233 SSTNEKLDQNPKNKTLKGEILANLKFVEELLGIGFKDPSAYFQLGVSESEKQEIENKIEE 292

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R      K F  AD IR++L  +   L D        + T W++
Sbjct: 293 RKRAKVQKDFLKADRIREELLKQKIALMDT------PQGTIWEK 330


>gi|291234575|ref|XP_002737225.1| PREDICTED: cysteinyl-tRNA synthetase-like [Saccoglossus
           kowalevskii]
          Length = 739

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 118/475 (24%), Positives = 193/475 (40%), Gaps = 88/475 (18%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIE-RARQEHPSIPINDAISIITSKNTQQFVKDT 111
           L + L     +      + + D  D + +    +    +  N   S++     +++ +D 
Sbjct: 162 LKQYLNNDSSQDNSVIQKVLEDSRDVLADWLDAKSGHEVTDNSIFSLLPKYWEEEYHRDM 221

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI- 170
             +  L      R +++IP+++  ++ II +G+ Y +N  + F  S+  N  + S  K+ 
Sbjct: 222 ASINVLPADVLTRVSDYIPEVVEYVKKIIDNGYGYVSNGSVYFSVSTFDNDPNHSYAKLV 281

Query: 171 ------------DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
                        E  +         KK+  DF +WK+S P EP W+SPWG+GRPGWHIE
Sbjct: 282 PEAVGDCKALEEGEGDLSISQDRLDEKKSQVDFAVWKKSKPGEPAWDSPWGKGRPGWHIE 341

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           CS M+S  LG+  DIH GG DL FPHH+NE+AQ+      +     ++H+G L ++G KM
Sbjct: 342 CSVMASCILGESLDIHTGGFDLRFPHHDNELAQAEAYYGNDHWVRYFLHSGHLTIQGCKM 401

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------- 330
           SKS  NFITI + LE          +  +RL  L+  +++ +D++   +  A        
Sbjct: 402 SKSLKNFITIKDALENH-------TSRQLRLVFLLHSWKDTLDYSDNTMESAVQYEKFIG 454

Query: 331 -----------------EILLSKWPQTSTSKGIIDPA----VLSALYNDLNTVSAIQALH 369
                            E  L KW ++              V  AL + ++T SA++ + 
Sbjct: 455 EFFLTVKDILRNAADGPEKFL-KWGESELKLNEQFQECKCKVHDALCDSVDTRSAMERMR 513

Query: 370 KLAREST------KNHDLLPI----------FNASAHILGIEVCKEHL---------NKN 404
            L   S       K   LLP                 I G     E +         N N
Sbjct: 514 DLVGNSNIYIRDMKAAKLLPNSILLRNIAVYLTKILKIFGAIEGDETIGFPMSVGDNNTN 573

Query: 405 ISIAIEKLV--------QERLILLKMK---KFSSADYIRKQ-LESKGFILEDYKN 447
           +   +   V        + R +  + K        D +R   L   G  LED++ 
Sbjct: 574 VEDTVMPYVKVFADFRDKVRQVAREQKVVEVLKLCDEVRDDILPELGVRLEDHEG 628



 Score =  123 bits (310), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 56/96 (58%), Gaps = 1/96 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YN+L R+   F   +   +  Y CGPTVYD +H+G+AR + +FD+L R+L  Y+
Sbjct: 22  NSQLYLYNSLTRQRELFIPQNGKQVLWYSCGPTVYDASHMGHARSLHIFDILRRILSEYF 81

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
               V Y  NITDIDDKII RARQ +        + 
Sbjct: 82  -NYDVVYCMNITDIDDKIIRRARQNYLYEEYKKTVQ 116


>gi|927229|gb|AAA73901.1| cysteinyl-tRNA synthetase [Homo sapiens]
          Length = 595

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 109/423 (25%), Positives = 171/423 (40%), Gaps = 84/423 (19%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 160 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 219

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 220 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 279

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 280 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 339

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 340 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 392

Query: 314 THYREPIDFTVQRLTEA---EILLSKW-----------------------PQTSTSKGII 347
             +++ +D++   +  A   E  L+++                        +   +K   
Sbjct: 393 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 452

Query: 348 DP--AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
           D   A+  AL ++++T + ++ +  L  +                               
Sbjct: 453 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 512

Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMKKFS---SAD 429
            I         LG  V     + ++   +   +Q         R I  + K       +D
Sbjct: 513 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 572

Query: 430 YIR 432
            +R
Sbjct: 573 ALR 575



 Score =  110 bits (276), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 1/82 (1%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
             D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NITDIDDKI
Sbjct: 1   PQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNITDIDDKI 59

Query: 80  IERARQEHPSIPINDAISIITS 101
           I+RARQ H      +       
Sbjct: 60  IKRARQNHLFEQYREKRPEAAQ 81


>gi|195583830|ref|XP_002081719.1| GD11166 [Drosophila simulans]
 gi|194193728|gb|EDX07304.1| GD11166 [Drosophila simulans]
          Length = 741

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 118/440 (26%), Positives = 177/440 (40%), Gaps = 89/440 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAY 254

Query: 147 EANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            ANN + FD +                 YG     +  E  +         K++  DF L
Sbjct: 255 AANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSAAEDRLSEKRSANDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+
Sbjct: 375 AAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA---EILLSK--------------------WPQTSTSKGIIDPA 350
             +++ +D++   +  A   E  L++                    +   +  +  +   
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQKK 487

Query: 351 VLSA-------LYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
             +A       L ++++T SA+ A+ +L   S                 ++        H
Sbjct: 488 FSNAQVLVHASLCDNIDTRSALDAIRELVSVSNVYIRDNKTRLNSLLLRNVATYITDLLH 547

Query: 391 ILGI------------------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKF--- 425
           + G                   +     L   +   ++ L +     R     +K F   
Sbjct: 548 VFGAISGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILED 444
              D +R   L + G  LED
Sbjct: 608 KLCDDLRDNVLPNLGVRLED 627



 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII RARQ H     
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNHLFEEY 106


>gi|21104458|dbj|BAB93499.1| OK/SW-CL.10 [Homo sapiens]
          Length = 453

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 124/464 (26%), Positives = 190/464 (40%), Gaps = 97/464 (20%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
            V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R T 
Sbjct: 1   MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTE 54

Query: 128 HIPQMIYLIQNIILH-GHAYEANNEIIFDTSSIP--NYGSFSRRKIDEQKMGTRVPEKYH 184
           +IPQ+I  I+ II      +    + +  + S+    YG   RR                
Sbjct: 55  NIPQIISFIEGIIASWERLFNGKRQCLLRSESLEETKYGKIGRRGP---WSSPETSGLLT 111

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
            ++  DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL FPH
Sbjct: 112 SRHANDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPH 171

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSW 302
           HENEIAQ     + E+  N ++H+G L+ +G   KMSKS  N+ITI + L+T       +
Sbjct: 172 HENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKT-------F 224

Query: 303 PAPVIRLAMLMTHYREPIDFTVQR--------------LTEAEILLS--------KWPQT 340
              V R   L + YR  ID++                 L +A   +         +    
Sbjct: 225 SPDVFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSVREAML 284

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH-----------------DLLP 383
                    AV +AL +D +T   + A+  LA                         ++ 
Sbjct: 285 WERLSSTKRAVKAALADDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIIS 344

Query: 384 IFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA--------- 428
            F      +GI +  +           +   +++LV+ R  + +   F+ A         
Sbjct: 345 YFEQFFETVGISLANQQYVSGDGSEATLHGVVDELVRFRQKVRQ---FALAMPEATGDAR 401

Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                         D +R+ L + G  ++D  +  +      W+
Sbjct: 402 RQQLLERQPLLEACDTLRRGLTAHGINIKDRSSTTS-----TWE 440


>gi|19922364|ref|NP_611087.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
 gi|122087256|sp|Q7KN90|SYCC_DROME RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|4972706|gb|AAD34748.1| unknown [Drosophila melanogaster]
 gi|7302987|gb|AAF58057.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
 gi|220943686|gb|ACL84386.1| Aats-cys-PA [synthetic construct]
          Length = 741

 Score =  301 bits (771), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 117/440 (26%), Positives = 173/440 (39%), Gaps = 89/440 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAY 254

Query: 147 EANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            ANN + FD +                 YG     +  E  +         K++  DF L
Sbjct: 255 AANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSIAEDRLSEKRSANDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+
Sbjct: 375 AAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA--------------------------EILLSKWPQTSTSK--- 344
             +++ +D++   +  A                                W +   +    
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQKK 487

Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
                  V ++L ++++T SA+ A+ +L   S                 ++        H
Sbjct: 488 FSNAQVQVHASLCDNIDTRSALDAIRELVSVSNVYIRDNKTRLNSLLLRNVATYITDLLH 547

Query: 391 ILGI------------------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKF--- 425
           + G                   +     L   +   ++ L +     R     +K F   
Sbjct: 548 VFGAISGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILED 444
              D +R   L + G  LED
Sbjct: 608 KLCDDLRDNVLPNLGVRLED 627



 Score =  140 bits (354), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 45/88 (51%), Positives = 62/88 (70%), Gaps = 1/88 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPS 89
           G   + YV NITDIDDKII RARQ H  
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNHLF 103


>gi|72080968|ref|YP_288026.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 401

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 129/422 (30%), Positives = 199/422 (47%), Gaps = 35/422 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           ++  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 1   MNKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 58

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++      +  + + +T K T ++ K         PT   R T  I ++I  I+ + 
Sbjct: 59  EKAQE------LGISEAELTEKYTNEYFKILEIFNIKKPTKIVRVTEKIEKIIEYIKLLE 112

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK++  
Sbjct: 113 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESL----LDKNTKKTKSNNDFVLWKKTQK 168

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 169 G-LFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 226

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS  N +   +           +   +IR   L  +   
Sbjct: 227 NPIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTV 279

Query: 319 PIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           PI+ T + +   + L+ K+ +         K      V   L   L         + L  
Sbjct: 280 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLN--LFIEGKFAKANFLIM 337

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           E  K  +   I     + L     K  L+       ++ ++    L+  K +S AD IR+
Sbjct: 338 ELIKQKENSTIRKIFLN-LRFNFTKMRLDPES----QEKIKNWNKLIMDKNYSEADKIRE 392

Query: 434 QL 435
           +L
Sbjct: 393 EL 394


>gi|328716861|ref|XP_001946257.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
           [Acyrthosiphon pisum]
 gi|328716863|ref|XP_003246061.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
           [Acyrthosiphon pisum]
          Length = 723

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 115/430 (26%), Positives = 186/430 (43%), Gaps = 82/430 (19%)

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
           +P N     +       F  + + L  L P    R + ++P+ I  I+ II +G+AYE+N
Sbjct: 187 VPDNSIFESLPRFWESNFHSNMSSLNILPPDKLSRVSEYVPETIAYIETIIKNGYAYESN 246

Query: 150 NEIIFDTSSI-----PNYGSF------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
             + FD ++       +Y           + + + +          K++P DF LWK+S 
Sbjct: 247 GSVYFDVAAFDSQPIHHYAKLVPEAYGDSKSLQDGEGDLTTSAVNEKRSPNDFALWKKSK 306

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
             EP W+SPWG+GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NEIAQ+      
Sbjct: 307 KGEPWWDSPWGKGRPGWHIECSVMASCILGQTLDIHTGGIDLKFPHHDNEIAQAEAYYNN 366

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E+    ++H+G L + G KMSKS  NFITI + L       ++  +  +RLA L+  +++
Sbjct: 367 EEWVRYFLHSGHLTISGCKMSKSLKNFITIEDAL-------KNNTSRQLRLAFLLHSWKD 419

Query: 319 PIDFTVQRLTEA---EILLSKW---PQTSTSKGIIDP----------------------- 349
            +D++   +  A   E LL+++    +  T +  +D                        
Sbjct: 420 TLDYSESTMESAMACEKLLNEFFLNVKNVTRRNYVDKLAIGYSKWLASEIELSKKFSLCK 479

Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKN--------------HDLLPIFNASAHILGI 394
             V +AL ++++T + ++A+ +                       D+         + GI
Sbjct: 480 LNVHAALCDNIDTKAVLEAIRECISACNVYLRDCTSSAINHMLLLDIAKYITEILKVFGI 539

Query: 395 EVCKE----HLNKNISIAIEKLV------------QERLILL--KMKK-FSSADYIRKQ- 434
           +   E        N S  +E +V              R I      K      D +R + 
Sbjct: 540 KTADEIGFPVSEGNSSNDVETIVTPYLNILSDFRDSVRAIARSIGSKDILILCDKLRDET 599

Query: 435 LESKGFILED 444
           L   G  LED
Sbjct: 600 LPDNGVRLED 609



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 15/146 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++K++N+L RK   F   + + +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+
Sbjct: 17  TPRLKLFNSLTRKKEIFIPKNGNKVHWYSCGPTVYDASHMGHARSYITFDILRRVLKDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
               V YV NITDIDDKII+RARQ H      + +   T K   Q       L  L    
Sbjct: 77  -HYDVEYVMNITDIDDKIIKRARQLHL---FEEYVKTATDKQIVQ-KDIILALGDLKKDI 131

Query: 122 Q----------PRATNHIPQMIYLIQ 137
           +           +A   +  +  LI+
Sbjct: 132 EQMDPDKKVMTLKAIEKLTSISQLIE 157


>gi|195334811|ref|XP_002034070.1| GM21666 [Drosophila sechellia]
 gi|194126040|gb|EDW48083.1| GM21666 [Drosophila sechellia]
          Length = 741

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 118/440 (26%), Positives = 176/440 (40%), Gaps = 89/440 (20%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              I  N     +      QF  D   L  L P    R + ++PQ++  IQ II +G AY
Sbjct: 195 GAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLAY 254

Query: 147 EANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            ANN + FD +                 YG     +  E  +         K++  DF L
Sbjct: 255 AANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFAL 314

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH+NE+AQS 
Sbjct: 315 WKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQSE 374

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A    +    ++H G L + G KMSKS  NF+TI E L       +   A  +RLA L+
Sbjct: 375 AAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFLL 427

Query: 314 THYREPIDFTVQRLTEA---EILLSK--------------------WPQTSTSKGIIDPA 350
             +++ +D++   +  A   E  L++                    +   +  +  +   
Sbjct: 428 HSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQKK 487

Query: 351 VLSA-------LYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
             +A       L ++++T SA+ A+  L   S                 ++        H
Sbjct: 488 FSNAQVLVHASLCDNIDTRSALDAIRDLVTVSNVYIRDNKTRLNCLLLRNVATYITDLLH 547

Query: 391 ILGI------------------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKKF--- 425
           + G                   +     L   +   ++ L +     R     +K F   
Sbjct: 548 VFGAISGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDIL 607

Query: 426 SSADYIRKQ-LESKGFILED 444
              D +R   L + G  LED
Sbjct: 608 KLCDDLRDNVLPNLGVRLED 627



 Score =  141 bits (355), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + K+K++N+L R+  +F  +D +N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+
Sbjct: 17  RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSDYF 76

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           G   + YV NITDIDDKII RARQ H     
Sbjct: 77  GYN-IHYVMNITDIDDKIIRRARQNHLFEEY 106


>gi|321453850|gb|EFX65049.1| hypothetical protein DAPPUDRAFT_265305 [Daphnia pulex]
          Length = 676

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 120/462 (25%), Positives = 184/462 (39%), Gaps = 101/462 (21%)

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
           ++D  D I     +    +  N   + +     ++F KD   L  L      R + ++P+
Sbjct: 178 LSDWLDSI-----KHGMDVSDNAIFASLPRYWEEEFYKDMAALNVLPADVITRVSQYVPE 232

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSF------SRRKIDEQKMGTRVP 180
           ++  I  I+  G AY AN  + FD +         Y           + + E +    V 
Sbjct: 233 IVDYIAKIMERGFAYSANGSVYFDVAKFDSQKNHKYAKLVPEAYGDSKALQEGEGDLSVS 292

Query: 181 EK--YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           E     KK+P DF LWK S   EP W+SPWG+GRPGWHIECS M+S  LG   D H GG+
Sbjct: 293 EDRLSEKKSPNDFALWKNSKSGEPSWDSPWGKGRPGWHIECSVMASAILGSSMDFHTGGV 352

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHH+NE+AQS      ++  + ++H G L ++G KMSKS  NFITI + L      
Sbjct: 353 DLKFPHHDNELAQSEAYYDNDEWVSYFLHTGHLTIQGCKMSKSLKNFITIQDALSRN--- 409

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLS-------------------- 335
                +  +R+  L+  ++E +D++   + EA   E +L                     
Sbjct: 410 ----SSRELRIFFLLHQWKETLDYSHSAMEEASSYEKMLREFFLNAKDLLRSGPTAAAIT 465

Query: 336 ---------KWPQTSTSKG----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN---- 378
                    KW                 V  A+ ++++T ++++A+  L  +  K     
Sbjct: 466 AQQQQQHFQKWSDAERELNQRFVQAKNRVRQAVCDNIDTKTSLEAIKSLISDCNKYLARM 525

Query: 379 ---------HDLLPIFNASAHILGIEVCKEHL-------------NKNISIA------IE 410
                      +         I G+   K+ L             N +IS        +E
Sbjct: 526 KRSANRVLIKSVAEYVTRLFQIFGVIEGKQTLGFPSTESSAGGPGNNDISAEEIVMPVLE 585

Query: 411 KLVQERLILLK------MKK-FSSADYIRKQ-LESKGFILED 444
            L + R  + K       K      D  R   L S G  LED
Sbjct: 586 ALAEFREEVRKEARQLGAKSVLELCDRFRDDVLPSLGVRLED 627



 Score =  138 bits (348), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 1/97 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+ IYN+L RK   F   + +NI  Y CGPTVYD +H+G+AR  + FD+L R+LR Y+G
Sbjct: 12  TKLMIYNSLTRKKEVFTPQNGNNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRDYFG 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
              +TYV NITDIDDKII+RARQ +         S +
Sbjct: 72  YD-ITYVMNITDIDDKIIKRARQNYLYEKYAAESSEL 107


>gi|213401855|ref|XP_002171700.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|211999747|gb|EEB05407.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 766

 Score =  300 bits (769), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 117/431 (27%), Positives = 178/431 (41%), Gaps = 87/431 (20%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIF 154
              + +     F KD   L  L PT   R + ++P+++  ++ II  G+AY   +  + F
Sbjct: 221 FRKLAAYWEDDFNKDMRALNVLPPTVVTRVSEYMPEIVDFVKKIIERGYAYAVEDGSVYF 280

Query: 155 DTSSIPNYGSF---------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           DT +    G F         + R++ ++  G     +  KK P DF LWK S   EP W+
Sbjct: 281 DTEAFSAAGHFYAKIEPWNKNNRELIDEGEGALAA-RTGKKRPGDFALWKASKSGEPFWD 339

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG+GRPGWHIECS M+   LG   DIH GG+DL FPHH+NE+AQS       +  N +
Sbjct: 340 SPWGKGRPGWHIECSVMAGTILGSNIDIHSGGIDLAFPHHDNELAQSEAFFDCPQWINYF 399

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
            H G L++EG+KMSKS  NFITI E+L       + + A  +RLA L+  +   +DF   
Sbjct: 400 FHMGHLHIEGQKMSKSLKNFITIKEIL-------KKYTARQLRLAFLLQQWNTQMDFKDA 452

Query: 326 RL-----------------------TEAEILLSKW---------PQTSTSKGIIDPAVLS 353
            L                       T+A      +          +  ++      AV  
Sbjct: 453 LLTHVLSTEQMYENFFRNVRALVDETDANSARGDYVPEKVNEPESELLSAFRETREAVHE 512

Query: 354 ALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHILGIE----- 395
           AL ++ NT   +Q L ++  ++                  +         I G++     
Sbjct: 513 ALCDNFNTPLVMQRLDQIVNKANVYINGAGKHVHSRLLASIAVYITKMFQIFGLDENGSP 572

Query: 396 ----VCKEHLNKNISIAIEKL--VQE--------RLILLKMKK----FSSADYIRK-QLE 436
                     N + S A   L  V+         R + ++ K      ++ D  R   + 
Sbjct: 573 NAIGWNSTSGNNDASSAQTTLPVVRAASTFRDTIRAMAMEKKSAAEILAACDKFRDYDMA 632

Query: 437 SKGFILEDYKN 447
             G  L D  N
Sbjct: 633 ELGVSLNDRPN 643



 Score =  112 bits (280), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 1/90 (1%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           +N++    T F A +  ++  Y CGPTVYD +H+G+AR  +  D+L R+L+ Y+    +T
Sbjct: 24  FNSMTHTKTPFIAPNGHSLTWYCCGPTVYDASHMGHARNYVTTDILRRILQNYF-NYDIT 82

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAIS 97
           +V+N+TDIDDKII RARQ++         +
Sbjct: 83  FVQNVTDIDDKIIVRARQKYLLEQYIQEHT 112


>gi|302911731|ref|XP_003050554.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256731491|gb|EEU44841.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 800

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 107/370 (28%), Positives = 156/370 (42%), Gaps = 64/370 (17%)

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +E          + +T      F++D   L  L P    R T ++PQ+   ++ I+  G 
Sbjct: 198 KETIDTSDQTMFTDLTQSMEDLFMEDMDALNVLRPDVITRVTEYVPQIAKFVERIVDKGF 257

Query: 145 AYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWK 195
           AYEA   + FD S+    G+   R          + E+  G+       KK+P DF LWK
Sbjct: 258 AYEAEGSVYFDISAFEKAGNTYARLRPDNRNDKSLQEEGEGSLSKNLGGKKSPGDFALWK 317

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
           +S   EP W SPWG GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS   
Sbjct: 318 KSKAGEPYWPSPWGNGRPGWHIECSVMASDVLGAQMDIHSGGIDLAFPHHDNELAQSEAY 377

Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                       N ++H G L++ G KMSKS  NF TI + L T       +    +R+ 
Sbjct: 378 FCEHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTIQDALATN------YSPRGMRIV 431

Query: 311 MLMTHYREPIDFTVQ---------------------RLTEA-----EILLSKWPQTSTSK 344
            LM  + + ++ +                        L EA        LS       ++
Sbjct: 432 FLMGRWNDGVEISPDMRLQADNWESTISNFFINVKALLAEAGISSGVKSLSINEDAKPTE 491

Query: 345 GII------DPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI------FN 386
           G++           +AL N  +T  A+  + KL   +       K+ DL  +        
Sbjct: 492 GLLGELEQAKQEFEAALTNSFDTPRAMSVILKLVNTANVHLRDNKDADLAALETIARWIT 551

Query: 387 ASAHILGIEV 396
               I G++ 
Sbjct: 552 KVVGIFGLDA 561



 Score =  103 bits (257), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 5/111 (4%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +K+YN+L       F  I+   +  Y CGPTVYD +H+G+AR  +  D++ R+L++Y+
Sbjct: 2   ESLKLYNSLNPGAPVPFVPIEKGKVAWYACGPTVYDKSHLGHARNYVSTDIIRRILQHYF 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPIN---DAISIITSKNTQQFVK 109
           G   V +V NITDIDDKII +AR++           +   +       F  
Sbjct: 62  G-FEVNFVMNITDIDDKIIIKARRQRLLELEKNKTYSKDELRELALAAFRA 111


>gi|323455151|gb|EGB11020.1| hypothetical protein AURANDRAFT_12123 [Aureococcus anophagefferens]
          Length = 271

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 104/278 (37%), Positives = 147/278 (52%), Gaps = 18/278 (6%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           ++ Y CGPTVYD  H+G+AR  +  D++ R    Y G + V +   +TD+DDKII RAR+
Sbjct: 1   LKWYACGPTVYDATHLGHARTYVTLDLVRRAATAYGGSR-VDFAMGVTDVDDKIINRARE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 +      +  +    F +D  RL CL P    R + H+  ++  + +I+  G  
Sbjct: 60  ------LGLEPLELARREEANFFEDLDRLGCLRPDRVLRVSEHVDDIVAYVGDIVDRGFG 113

Query: 146 YEANN-EIIFDTSSIPN-YGSFS-------RRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
           Y     ++ FD   + + YG+F+              +   +      K++  DF LWK 
Sbjct: 114 YATEGGDVWFDVGKLGDAYGAFAEGRGTSKAAAQAALEAEDKASISTKKRDGRDFALWKG 173

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
           +   E  W+SPWG GRPGWHIECSAM+    G   D+H GG+DL FPHHENEIAQ   A 
Sbjct: 174 AKAGEISWDSPWGAGRPGWHIECSAMTRATFGDALDLHAGGVDLAFPHHENEIAQWRGAS 233

Query: 257 R--IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
                     W+H G L++EGRKMSKS  NF+T+ ELL
Sbjct: 234 GDLEGVWCPCWLHTGHLHIEGRKMSKSLKNFVTVRELL 271


>gi|54020642|ref|YP_116169.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|61216154|sp|Q5ZZP6|SYC_MYCH2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|53987815|gb|AAV28016.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 404

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 132/422 (31%), Positives = 200/422 (47%), Gaps = 35/422 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 4   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 61

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++      +  + + +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 62  EKAQE------LGISEAELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 115

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK++  
Sbjct: 116 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESL----LDKNTKKTKSKNDFVLWKKTQK 171

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 172 G-LFFKSFFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 229

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS  N +   +           +   +IR   L  +   
Sbjct: 230 NPIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTV 282

Query: 319 PIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           PI+ T + +   + L+ K+ +         K      V   L   L         + L  
Sbjct: 283 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLN--LFIEGKFAKANFLIM 340

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           E  K  +   I     + L     K HLN       ++ ++    L+  K +S AD IRK
Sbjct: 341 ELIKQKENSTIRKIFLN-LRFNFTKMHLNPES----QEKIKNWNKLIMDKNYSEADKIRK 395

Query: 434 QL 435
           +L
Sbjct: 396 EL 397


>gi|254584650|ref|XP_002497893.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
 gi|186703720|emb|CAQ43411.1| Cysteinyl-tRNA synthetase [Zygosaccharomyces rouxii]
 gi|238940786|emb|CAR28960.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
          Length = 746

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 115/474 (24%), Positives = 196/474 (41%), Gaps = 82/474 (17%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           NA+  +  + +   L     E    +   + D+    ++       S+   +    +++ 
Sbjct: 174 NAKFPMHVNAVRSALESKNYEGD-EFYEKVKDVMMPYLDG--ISGSSVNDREVFRKLSAF 230

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN 161
             +++  D   L  LAP    R + ++P+++  ++ I+ +G+ Y   +  + FDT+    
Sbjct: 231 WEEKYDDDMRLLNVLAPDVTTRVSEYVPEIVEFVKRIVDNGYGYATEDGSVYFDTTKFDR 290

Query: 162 YGSFSRRK----------IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
               +  K          +  +  G+ V     K++ +DF LWK S   EP WESPWG G
Sbjct: 291 DEKHAYAKNQPWNKGDLELVSEGEGSLVGSTSGKRSSSDFALWKASKDGEPRWESPWGEG 350

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS       +  N ++H G L
Sbjct: 351 RPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNEMAQSEACFDNYQWVNYFLHTGHL 410

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-- 329
           ++EG+KMSKS  NFIT+ E L+        + +  +RLA  +T +   +DF    + E  
Sbjct: 411 HIEGQKMSKSLKNFITVQESLKM-------YSSRQLRLAFCLTQWNNQMDFKESLMQEVR 463

Query: 330 -----------------------AEILLSKW-PQTSTSKGIIDPAVLSALYNDLNTVSAI 365
                                  A   L     +           V  A  ++L+T +A+
Sbjct: 464 GMESLFGNFFTNVRALQHDIGAGASKKLGALERELLAGLDDSKDRVDEAFCDNLSTPTAM 523

Query: 366 QALHKLAREST----------KNHDLLPIFNASAHILGI--------EVCKEHLNKNISI 407
           ++L +L  +S           +   L+ +      ILGI            E        
Sbjct: 524 KSLAELVSQSNIYISKAGTEVRIEPLVDVVKFVTRILGIVGVPVRADGFGWESGESRGGG 583

Query: 408 AIEKLV------------QERLILLKM---KKF-SSADYIRK-QLESKGFILED 444
           ++E+L             + R + +     K++    D +R   L      ++D
Sbjct: 584 SVEELALPYVKCLSKFRDEVRSMAIDNADKKEYLGLTDRVRDHDLLELNVAVDD 637



 Score =  126 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           K+ +K+YN+L R    F  I     +  Y CGPTVYD AH+G+AR  +  D+  RLL+ Y
Sbjct: 32  KRVLKLYNSLTRNKEVFVPISGGKSVSWYSCGPTVYDAAHMGHARNYVSIDINRRLLQDY 91

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           +G   V +V+N+TDIDDKII R RQ +    +
Sbjct: 92  FGYD-VKFVQNVTDIDDKIILRGRQNYLFEQL 122


>gi|294155832|ref|YP_003560216.1| cysteine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600502|gb|ADE19998.1| cysteine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 408

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 133/437 (30%), Positives = 202/437 (46%), Gaps = 51/437 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP++ FD++ R  R     K    + NITDIDDKII +A +
Sbjct: 2   LKIYVCGPTVYNDLHIGNIRPILNFDLMLRAYRNTG--KDFILIHNITDIDDKIINKALE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           E      N    +I+ +   Q++K    L     +H     +++  M   I+NI  +  A
Sbjct: 60  E------NVDELVISQRYANQYIKLLQELNIKTISHLEYVRDNLDVMKKYIENIRQNKDA 113

Query: 146 Y-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +    ++FD       YG+ S +KI++        E   KK+P+DF LWK++      
Sbjct: 114 YLDKEGNVLFDVEKNKKAYGTVSNQKIEQMVF---EQENSTKKHPSDFSLWKKTNVG-VK 169

Query: 204 WESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           + S +G GRPGWH EC A+   +  G+  DIHGGG+DL FPHHENE  Q     + +  A
Sbjct: 170 FNSQFGEGRPGWHTECCAIIDKHFPGQGVDIHGGGIDLKFPHHENENIQHYSLYK-KPLA 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WIH G +N  G KMSKS GN I   + LE          +   R+ +L+     P++ 
Sbjct: 229 KNWIHCGHINYNGEKMSKSLGNVILAKDFLEEHG-------SNTFRMILLLADITSPMNL 281

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN----------------DLNTVSAIQ 366
           +   +  ++ + +K  Q +    ++D   +  L                  D N      
Sbjct: 282 SDSLIENSKKIYAKIKQVAFKNFLLDANKIIDLNEELYIELNSLVANLKNSDFNF----- 336

Query: 367 ALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
            ++ L ++  KN D  L          LG    +++  K+  I    + Q    LL  K 
Sbjct: 337 NVNNLLKQLNKNFDSKLATTLVKVFEDLGFNF-EQYTFKDFKI----IYQNWQNLLLNKT 391

Query: 425 FSSADYIRKQLESKGFI 441
           F  AD +RK L     I
Sbjct: 392 FDEADKLRKILIKNNLI 408


>gi|240047303|ref|YP_002960691.1| Cysteinyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984875|emb|CAT04868.1| Cysteinyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 401

 Score =  300 bits (768), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 136/426 (31%), Positives = 200/426 (46%), Gaps = 39/426 (9%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  + ++YVCGPTVYDF HIGN RP+I FD L  +LRY+   K V ++ NITDIDDKII
Sbjct: 3   INKDSFKIYVCGPTVYDFIHIGNLRPIISFDFLISILRYF--NKKVDFLHNITDIDDKII 60

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
            RA  E      N + S I +     +++         P    + T+H+ ++I  I N+ 
Sbjct: 61  NRALAE------NKSESEIANFYYLHYLEMLKIYNVFPPNMIIKVTDHLDKIINYISNLE 114

Query: 141 LHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G  Y   + ++IF+T  I NYG  S + + +           +      F+LWK++  
Sbjct: 115 QAGFTYYNQDGDLIFNTKKIENYGKVSGQILSKLYKNKDNKANNND-----FVLWKKTKK 169

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
               + S +G GRPGWH ECSAM   Y     DIHGGG DLIFPHHENE AQ    ++ E
Sbjct: 170 G-VVYNSSFGLGRPGWHTECSAMIFDYFNTQIDIHGGGNDLIFPHHENENAQHFALNK-E 227

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
                W+  G +N+ G+KMSKS GN I   +         + +   V R  +L +    P
Sbjct: 228 DITKDWLRVGVININGQKMSKSLGNVILAKDF-------YQKYHPDVFRNILLTSSLSSP 280

Query: 320 IDFTVQRLTEAEILL----SKWPQTSTSKGIIDPAVLSALYNDL---NTVSAIQALHKLA 372
           I+ T + LT    L+      +     +   +D   +  + N     N   A   + +L 
Sbjct: 281 INITSELLTNHSNLILSYKKSYFNHLFNPQTVDKNKVDEVLNLFLSQNFSQANLIISQLL 340

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
           + + +N  L  IF      L  +      +           Q+R+     K +S AD IR
Sbjct: 341 K-TNQNSTLALIFQT----LRFQFASLKASDEDIAMYNLWNQKRV----AKLWSEADEIR 391

Query: 433 KQLESK 438
           ++L  K
Sbjct: 392 EKLWKK 397


>gi|331698452|ref|YP_004334691.1| Cysteine--tRNA ligase [Pseudonocardia dioxanivorans CB1190]
 gi|326953141|gb|AEA26838.1| Cysteine--tRNA ligase [Pseudonocardia dioxanivorans CB1190]
          Length = 365

 Score =  299 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 105/375 (28%), Positives = 171/375 (45%), Gaps = 28/375 (7%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
              RMYVCG T YD  H+G+A   +  DV  R+LR+      V   RN+TD+DD +    
Sbjct: 13  GRARMYVCGITPYDTTHLGHAATFVWADVAARVLRHVG--VDVDVCRNVTDVDDVL---- 66

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
             +  +           +    +F +D   L    PT++PRA  H+ Q++ L + ++  G
Sbjct: 67  --DAAAARAGARYDSFAAVQQFRFERDMAALGVRRPTYEPRAHVHVAQVVELAEALLERG 124

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
            AY  +  + F  + +      +  +               + +PAD ++W+ +   EP 
Sbjct: 125 AAYHRDGTVWFRGAGVRERAGLAADEAAALADEFGDRRDDGRDDPADVVIWRVAGHGEPA 184

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWH EC+AMS   LG   D+H GG DL +PHH  E A +     +   A 
Sbjct: 185 WPSPWGEGRPGWHAECAAMSLTTLGPALDLHVGGADLRYPHHAYEAAMAEAVTGVTPFAR 244

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            W+H G + ++GRKM+KS GN + ++++L  +       PA  +RL ++   + +  D+ 
Sbjct: 245 AWLHVGTVRIDGRKMAKSAGNLVLVSDVLADR-------PAAALRLLLVDRPWAQTWDYR 297

Query: 324 VQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
            + L  AE  L      +    T   +    V +AL +DL+   A+    +    +    
Sbjct: 298 DEDLRAAETRLEALYAAASHGVTENPVASAEVTAALLDDLDVPRALAVAQEAGGTAA--- 354

Query: 380 DLLPIFNASAHILGI 394
                      +LG+
Sbjct: 355 ------RQVLSVLGL 363


>gi|255728717|ref|XP_002549284.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240133600|gb|EER33156.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 786

 Score =  299 bits (767), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 122/478 (25%), Positives = 193/478 (40%), Gaps = 98/478 (20%)

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS---------KNTQQFVKDTTRL 114
               Y  N  +  D+ + + +         +  + +T             +++ +D  RL
Sbjct: 207 HETIYNSNKINSIDEYLTKIKDVAMPHLDKEFGATVTDPQIFKKLPSYWEKRYNEDMARL 266

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI----PNYGSF---S 166
             L P+   R + ++P +I  +  II +G+AY   +  + FDT         Y      S
Sbjct: 267 NVLPPSITTRVSEYVPDIIEFVDKIIENGYAYATEDGSVYFDTVKYEHSKHEYAKLQPWS 326

Query: 167 RRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
           +  +     G   +     K++ ADF LWK S P EP W+S WG+GRPGWHIECS M+S 
Sbjct: 327 KGDLSLINDGEGSLSTGNTKRSSADFALWKASKPGEPSWDSKWGKGRPGWHIECSVMASD 386

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             G+  DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L+++G+KMSKS  NF
Sbjct: 387 IGGETLDIHSGGIDLCFPHHDNELAQSEAYFDNKQWINYFMHNGHLHIQGQKMSKSLKNF 446

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKW----- 337
           ITI+E L       + + A  +RL   +  + +P+DF    + E    E   SK+     
Sbjct: 447 ITIDEAL-------KDFSARQLRLVFALNPWEKPLDFKDSLIHEVKSIEATFSKFFTNIR 499

Query: 338 ------------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
                                    Q           V  A  ++L++  AI+ L  L  
Sbjct: 500 ALNSDYKHKVDNGEYVSRKIGDVEKQLYKDLANASEEVDIAFNDNLSSGQAIRVLQDLVS 559

Query: 374 ESTKNHDLLPI----------------FNASAHILGIEVCKEHLNKNISIA--------- 408
           ++     L                         ILG E+  + L                
Sbjct: 560 KANTYIQLTSSGNPELRIEVLISITHWIVKILDILGFEIRSDKLGWIDDAEQSTNGSGAS 619

Query: 409 --------IEKLVQERLILLK---MK----KF-SSADYIRKQLESKGFILEDYKNPDN 450
                   ++ L Q R  +      K    +F  ++D IR QL + G  L+D  +  +
Sbjct: 620 TEDIALPYVKALAQFRDSVRNLAINKAELTEFLKASDAIRSQLVNLGVSLDDRPDGTS 677



 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 44/116 (37%), Positives = 69/116 (59%), Gaps = 9/116 (7%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +K+YN+L R   EF  I P  I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 47  KPTLKLYNSLTRSKNEFHPIKPGQITWYSCGPTVYDHSHMGHARNYVSTDISRRILQDYF 106

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSI--------PINDAISIITSKNTQQFVK 109
           G   + +++N+TDIDDKII  ARQ++            IND + + + +  + +V+
Sbjct: 107 G-YHINFIQNVTDIDDKIIIAARQQYLFEEKLTNQYKDINDDLKLKSKEYLKFYVE 161


>gi|223994283|ref|XP_002286825.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220978140|gb|EED96466.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 807

 Score =  299 bits (766), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 113/461 (24%), Positives = 178/461 (38%), Gaps = 99/461 (21%)

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           +  R++   I  +   +    +  ++F++D   L    P    R T ++P+++  ++ II
Sbjct: 228 KLDREKGHLITDHSVFNAHARRYEREFMEDMAALGIREPDILTRVTEYVPKIVAFVETII 287

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------------KYH 184
             G AY++N  +     +    G  + RK++    G                        
Sbjct: 288 SKGLAYKSNGSVYLSLDAFQEAG-HNYRKLNPAGPGGAATTAAEMAEGEGALGGVGGDSE 346

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K+NP DF LWK S   EP WESP+G GRPGWHIECS ++   LG+  DIH GG DL FPH
Sbjct: 347 KRNPNDFALWKASKAGEPAWESPFGPGRPGWHIECSVVAGDILGERIDIHSGGEDLKFPH 406

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H+NE+AQS       +  N + H G L++EG KMSKS  NFITI + LE          A
Sbjct: 407 HDNELAQSEACFGCNQWVNYFTHTGHLHIEGLKMSKSLKNFITIRQALE-------HNTA 459

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEI-------------LLSK---------WPQTST 342
             +R+  L+  + +P++++ Q + +A                L++         W     
Sbjct: 460 RQLRIMFLLQGWDQPMNYSDQTIDDARSKETTFKSFFREVEALTRDDYLSEEVGWRMEEH 519

Query: 343 SKGIID------PAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLP 383
              + D       +V  +L ++ NT  A+ AL K+  E+                  +  
Sbjct: 520 DHKLADAYLTARQSVHESLLDNFNTKEAMGALLKVINEANAYLRTANAKPSVLLLRSIAT 579

Query: 384 IFNASAHILGI----------------EVCKEHLNKNISIAIEKLVQER-------LILL 420
                  + G+                   +          I  +V  R       L   
Sbjct: 580 YITEILKVFGVVSGSDEFGFGSGGSGDGNVESTDGSGSEPFIGAMVSFRESVRNEALEAA 639

Query: 421 KMKKFSSA---------DYIRKQ-LESKGFILEDYKNPDNG 451
           K    + A         D +R + L   G  LED       
Sbjct: 640 KGGD-AQAAIQSILQICDGLRDEVLPKLGVRLEDRPAGTMW 679



 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 16/141 (11%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + + NTL  K   F  +   +++ Y CGPTVYD +H+G+AR  + FD++ R++  Y+   
Sbjct: 42  LLLRNTLTGKKEPFVPMQSRHVKWYTCGPTVYDSSHVGHARTYLSFDIMRRIMTDYFHYN 101

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y  N TDIDDKII RARQ      + +  S+           D  +L  LA      
Sbjct: 102 -VLYQINTTDIDDKIILRARQNELMRLLEEDPSV-----------DFDKLVVLAKEALEE 149

Query: 125 ATNHIPQ----MIYLIQNIIL 141
           A     +    ++  I+    
Sbjct: 150 AKAKSDEKKGVIVAAIEKAGE 170


>gi|316970881|gb|EFV54739.1| cysteinyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 786

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/443 (26%), Positives = 172/443 (38%), Gaps = 100/443 (22%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              +     Q F  D   L  L P    R + +IP+++  +  ++  G AYE    + FD
Sbjct: 205 FDSLARHFEQDFDLDMAALNVLPPDVVTRVSEYIPEVVAFVDGLVKRGFAYEVQGSVYFD 264

Query: 156 TSSI-----PNYGSF--------SRRKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME 201
           T +        YG          S     E ++      +   K+   DF LWK S P E
Sbjct: 265 TVTFGRTDGHRYGRLLPEAVQDTSLLVEGEGELSLGDENQARQKRFSGDFALWKASKPGE 324

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
           P W SPWG GRPGWHIECSAM+S   G+  D+H GG DL FPHH+NE+AQS         
Sbjct: 325 PAWPSPWGPGRPGWHIECSAMASAICGEQLDVHAGGFDLKFPHHDNELAQSEAYHGHAPW 384

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
              ++H G L ++G KMSKS  NF+TI + L       + + +  IRL  LM ++ EP+D
Sbjct: 385 VRYFLHAGTLRIQGLKMSKSLKNFVTIKQAL-------QQYTSRQIRLLFLMHNWAEPLD 437

Query: 322 FTVQRLTEA------------------EILLSKWPQTSTSKGIIDP------------AV 351
           ++ Q + +A                      S+    S +K   D             AV
Sbjct: 438 YSPQTMEKALHFERICQQFSRTVAHYLRRYFSRGKAGSYAKLTADELRLLQALQTCKQAV 497

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHILGIEVCK 398
             AL + ++T +A++ + +L        D                  N    + G     
Sbjct: 498 HDALCDSVDTRTALEHIRELIGHVNVYLDSSSAVPNCLLLRNSAIYVNHMLKLFG--AAG 555

Query: 399 EHLNKNISIAIE--------------------------KLVQERLILL-KMK------KF 425
              ++  S  I+                           L   R ++  + K        
Sbjct: 556 SDADEIGSRTIDYSCGFGDKGDVNSDCANESLLMPCLNALADFREVVRSEAKIHGVQALL 615

Query: 426 SSADYIRKQ-LESKGFILEDYKN 447
              D IR + L + G +LED K 
Sbjct: 616 KECDRIRDEILPNMGVLLEDRKG 638



 Score =  139 bits (351), Expect = 9e-31,   Method: Composition-based stats.
 Identities = 45/99 (45%), Positives = 62/99 (62%), Gaps = 1/99 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L RK   F     + +  Y+CGPTVYD AH+G+AR  I FD+L R+L++Y+G  
Sbjct: 29  LKLYNSLTRKKEIFIPRHGNQVNWYICGPTVYDAAHMGHARSYISFDILRRVLQHYFGYD 88

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
            V +V N+TDIDDKII RARQ H      D+   +    
Sbjct: 89  -VLFVMNVTDIDDKIIVRARQRHLFQNYLDSAPSVEKMM 126


>gi|312601583|gb|ADQ90838.1| Cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 404

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 131/422 (31%), Positives = 201/422 (47%), Gaps = 35/422 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 4   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 61

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++      +  + + +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 62  EKAQE------LGISEAELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 115

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK++  
Sbjct: 116 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESL----LDKNTKKTKSKKDFVLWKKTQK 171

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 172 G-LFFKSFFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 229

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS  N +   +           +   +IR   L  +   
Sbjct: 230 NPIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTV 282

Query: 319 PIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           PI+ T + +   + L+ K+ +         K      V   L   L   S     + L  
Sbjct: 283 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLN--LFIESKFAKANFLIM 340

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           E  K  +   I     + L     K HL+       ++ ++    L+  K +S AD IR+
Sbjct: 341 ELIKQKENSTIRKIFLN-LRFNFTKMHLDPES----QEKIKNWNKLIMDKNYSEADKIRE 395

Query: 434 QL 435
           +L
Sbjct: 396 EL 397


>gi|323651396|gb|ADX97544.1| cysteinyl-tRNA synthetase [Moumou virus]
          Length = 417

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 112/391 (28%), Positives = 175/391 (44%), Gaps = 39/391 (9%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
             + I+MYVCGPTVY+ AHIG+AR  ++ D++ + +   +  +    V NITDIDDKII+
Sbjct: 3   SENLIKMYVCGPTVYNDAHIGHARVYMMVDLINKTMN-RFLNRNTLLVMNITDIDDKIIK 61

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
            +           +   ++ K   +F    ++L    P    R +  I  +I  IQNII 
Sbjct: 62  ASEIN------GISWQELSKKYEDKFFTSMSQLNIDLPDIIIRVSESIIDIIEYIQNIIN 115

Query: 142 HGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVPEKYHKKNPADFILWKR 196
           +  AY  +   + FDT S  N G     +IDE++              KK+  DF LWK 
Sbjct: 116 NNFAYITDDGSVYFDTISYINAGYEFSFEIDEEEISYESQISNDIINQKKHKKDFALWKS 175

Query: 197 STPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            T    G+++ +          G PGWHIECS M    +G   DIH GG+DL FPHH NE
Sbjct: 176 RTKNNVGFDANFSFNGNLIKTYGIPGWHIECSTMIHKTIGNHLDIHFGGIDLKFPHHHNE 235

Query: 249 IAQSCCADR--------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
             Q+C             ++  N ++H G L ++G+KMSKS  NF TI+++L       +
Sbjct: 236 NLQACAYYHPKYHPNDKTKEWTNKFMHIGHLCIKGKKMSKSLKNFSTIDDIL-------Q 288

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  R   +   ++ P++F    +  A+ + +               +L+  Y   +
Sbjct: 289 DLTPNEFRWMFMQHKWQNPMEFNDGVIENAKNMENSIRNLMNRTKNYPFDILNVKY--FD 346

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHI 391
               +  L  + +   K    L  F   A +
Sbjct: 347 KEYKLSKLFDIIK--NKIITSLESFEFDAVV 375


>gi|332670290|ref|YP_004453298.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Cellulomonas fimi ATCC 484]
 gi|332339328|gb|AEE45911.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Cellulomonas fimi ATCC 484]
          Length = 418

 Score =  298 bits (764), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 117/416 (28%), Positives = 187/416 (44%), Gaps = 48/416 (11%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           +T   ++            +YVCG T YD  H+G+A   + FDVL R  R     + V Y
Sbjct: 23  DTSTGQLVVAAP--GPTATLYVCGITPYDATHLGHAATYVAFDVLGRAWRDAG--QQVRY 78

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
             N+TD+DD ++ERA               + ++    + +D T L  + P         
Sbjct: 79  ASNVTDVDDPLLERA------TATGVEWQDLAAEQVALYAEDMTALGVVPPDAWTGVVES 132

Query: 129 IPQMIYLIQNIILHGHAYEAN---------NEIIFDTSSIPNYGSFSRRK------IDEQ 173
           +P ++  +  ++  G AY  +          ++  D S+   +G+ +         +  +
Sbjct: 133 VPAVVDAVAALVAAGAAYTVDTPDALGDGPGDVYADLSADGAFGTVAGLDPATMLALSAE 192

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFD 232
           + G   P +  K++P D +LW+R    EP W+    GRGRPGWHIEC+ ++   LG  FD
Sbjct: 193 RGG--DPGRPGKRSPLDPLLWRRERAGEPAWDGGTLGRGRPGWHIECAVIARDSLGLPFD 250

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + GGG DL FPHHE   + +   D     A + +H G + L+G KMSKS GN + ++ L 
Sbjct: 251 VEGGGSDLQFPHHEMSTSHARLLDAGHG-ARVHVHAGMVGLDGEKMSKSRGNLVLVSRLR 309

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---- 348
           E             IRLA+L   Y E  D+T   L EA   L  W +  +  G  D    
Sbjct: 310 ED------GVDPMAIRLAILAHRYSEDWDWTDAGLKEAVERLGGWRRALSGNGGPDATAT 363

Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-------NASAHILGIEV 396
             A+ +A+ +DL+T  A+  +   A  + +  D  P+         A   +LG+ +
Sbjct: 364 IAALRAAVADDLDTPRALDVVDDWALAALRG-DAEPVEGAPGLVARAVDALLGVRL 418


>gi|47458983|ref|YP_015845.1| cysteinyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|61216201|sp|Q6KIE2|SYC_MYCMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|47458311|gb|AAT27634.1| cysteinyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 413

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 126/430 (29%), Positives = 197/430 (45%), Gaps = 42/430 (9%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           +YVCGPTVY+  HIGN +P++ FD+  R     + EK   ++ N+TDIDDKIIE+A +E 
Sbjct: 4   IYVCGPTVYNKVHIGNMKPIMTFDLFLR--GANFIEKQYLFLHNLTDIDDKIIEKASKE- 60

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                N     I+   +  ++K         P +  + T++I  +I  I  ++  G  Y 
Sbjct: 61  -----NKTELEISELYSDFYLKMLDEYNINKPDYIEKVTDNINMIIEYIGLLVKKGSGYI 115

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
               + FDT+  P YGS S   +++   G     K  K NP DF+LWK++      W+SP
Sbjct: 116 KKGSVYFDTTKYPEYGSISNLNLNKTLDG-DDDFKNEKNNPHDFVLWKKTKVG-ITWKSP 173

Query: 208 WGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           W  GRPGWH ECSA+ +H       DIHGGG+DLIFPH+ENE  Q+     +   A  W+
Sbjct: 174 WSEGRPGWHTECSALINHIFKKDQIDIHGGGIDLIFPHNENENIQNIALHGLS-LAKKWL 232

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G +  E  KMSKS  NFI  ++ +E        +     R  +L T +  PI    + 
Sbjct: 233 HVGHIKWENEKMSKSLNNFILADDFIE-------KYGNDTFRTLILNTSFSTPISINEEI 285

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL------HKLAR------- 373
           L   + + +K+  T     ++         N++ T   ++ +       + ++       
Sbjct: 286 LESNKKISNKYQVTFNQANLLIMQSKKR-QNEVETQKYLEKIAKLLENFEFSKINFEINL 344

Query: 374 -----ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
                 S  + D          +LG +   +    N+S     L  +  I    K F  +
Sbjct: 345 QIKLFNSVVDLDAANKLVECFKLLGFKFSSQ----NVSQKDLDLFLKWKIEKTNKNFKIS 400

Query: 429 DYIRKQLESK 438
           D +  +L+ K
Sbjct: 401 DKLFLELKEK 410


>gi|323352855|gb|EGA85157.1| YNL247W-like protein [Saccharomyces cerevisiae VL3]
          Length = 637

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 47/334 (14%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++   +I   +    + +   Q+F  D   L  L PT   R + ++P++I  +Q II +
Sbjct: 221 DKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDN 280

Query: 143 GHAYE-ANNEIIFDTSSI-----PNYGS---FSRRKID---EQKMGTRVPEKYHKKNPAD 190
           G+AY  ++  + FDT         +Y     +++ ++D   + +          KK+  D
Sbjct: 281 GYAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNND 340

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S   EP WESPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 341 FALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELA 400

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS      ++  N ++H G L++EG+KMSKS  NFITI E L       + +    +RLA
Sbjct: 401 QSEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLA 453

Query: 311 MLMTHYREPIDFTVQRLTEAE----------ILLSKWPQTSTSKGIIDPAV--------- 351
                +   +DF    + E +            +      + S G I             
Sbjct: 454 FASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLA 513

Query: 352 ---------LSALYNDLNTVSAIQALHKLAREST 376
                     SA  ++L+T  A++ L +L  +S 
Sbjct: 514 DFVESESKVHSAFCDNLSTPVALKTLSELVTKSN 547



 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI 92
             V +V+N+TDIDDKII RARQ +     
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNYLFDNF 123


>gi|207341909|gb|EDZ69841.1| YNL247Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 610

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 103/334 (30%), Positives = 158/334 (47%), Gaps = 47/334 (14%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++   +I   +    + +   Q+F  D   L  L PT   R + ++P++I  +Q II +
Sbjct: 221 DKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDN 280

Query: 143 GHAYE-ANNEIIFDTSSI-----PNYGS---FSRRKID---EQKMGTRVPEKYHKKNPAD 190
           G+AY  ++  + FDT         +Y     +++ ++D   + +          KK+  D
Sbjct: 281 GYAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNND 340

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S   EP WESPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 341 FALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELA 400

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS      ++  N ++H G L++EG+KMSKS  NFITI E L       + +    +RLA
Sbjct: 401 QSEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLA 453

Query: 311 MLMTHYREPIDFTVQRLTEAE----------ILLSKWPQTSTSKGIIDPAV--------- 351
                +   +DF    + E +            +      + S G I             
Sbjct: 454 FASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLA 513

Query: 352 ---------LSALYNDLNTVSAIQALHKLAREST 376
                     SA  ++L+T  A++ L +L  +S 
Sbjct: 514 DFVESESKVHSAFCDNLSTPVALKTLSELVTKSN 547



 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI 92
             V +V+N+TDIDDKII RARQ +     
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNYLFDNF 123


>gi|58393703|ref|XP_320253.2| AGAP012283-PA [Anopheles gambiae str. PEST]
 gi|55234373|gb|EAA00242.2| AGAP012283-PA [Anopheles gambiae str. PEST]
          Length = 743

 Score =  297 bits (762), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 122/459 (26%), Positives = 181/459 (39%), Gaps = 93/459 (20%)

Query: 72  ITDIDDKIIER-ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + D  D + +    ++  S+  N     +       F KD   L  L P    R + ++P
Sbjct: 179 LQDSKDPLADLLDSKQGSSVTENAIFETLPRYWEDAFHKDMAALNVLQPDVLTRVSEYVP 238

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGT 177
           Q++  I+ II +G AYEAN  + FD +                 YG   + +  E  +  
Sbjct: 239 QIVTYIEKIIANGLAYEANGSVYFDVAGFDRREQHHYAKLVPEAYGDAKQLQEGEGDLSI 298

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
                  K++  DF LWK S   EP W+SPWGRGRPGWHIECSAM+S   G   DIH GG
Sbjct: 299 GADRLTEKRSANDFALWKSSKAGEPWWDSPWGRGRPGWHIECSAMASDICGDYLDIHTGG 358

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           +DL FPHH+NE+AQS   D   +    ++H G L + G KMSKS  NF+TI ++LE    
Sbjct: 359 VDLKFPHHDNELAQSEAHDGSAEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQVLEKH-- 416

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE--------------------------AE 331
                 A  +RLA L+  +++ +D++   +                            A 
Sbjct: 417 -----TATQLRLAFLLHSWKDTLDYSDNTMEMAVQYERFLNEFFLNVKDLTRHVQTGPAR 471

Query: 332 ILLSKWP----QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA----------RESTK 377
               +W     +          A+  AL ++++T +A+  +  L           R +  
Sbjct: 472 DAFDRWRPVEAELERKFADARAAIHEALCDNVDTRTALDVMRGLVSACNVYIKEHRSAGF 531

Query: 378 NHDLLPIFNA----SAHILG------------IEVCKEHLNKNISIAIEKLV-------- 413
           N  LL    A      HI G            I          ++  +E+ V        
Sbjct: 532 NALLLRRVAAYCTDLLHIFGAISGPRGGIGFPISAGAAGDGTGMAGDLEQTVMPYLQALA 591

Query: 414 ----QERLILLKMKK---FSSADYIRKQ-LESKGFILED 444
                 R     +K        D +R   L   G  LED
Sbjct: 592 EFRNAVREQARGLKATEILQLCDQLRDDVLPGLGVRLED 630



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 46/90 (51%), Positives = 58/90 (64%), Gaps = 1/90 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            K+ +YN+L R+   F   D  N+  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G
Sbjct: 18  PKLYLYNSLTRRKELFVPRDGRNVHWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFG 77

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPI 92
              V YV NITDIDDKII+RARQ H     
Sbjct: 78  YN-VLYVMNITDIDDKIIKRARQNHLYERY 106


>gi|117928653|ref|YP_873204.1| cysteine--tRNA ligase [Acidothermus cellulolyticus 11B]
 gi|117649116|gb|ABK53218.1| Cysteine--tRNA ligase [Acidothermus cellulolyticus 11B]
          Length = 373

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 119/374 (31%), Positives = 173/374 (46%), Gaps = 27/374 (7%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
             +RMYVCG T YD  H+G+A   I  DVL RLLR       V   RN+TD+DD +++ A
Sbjct: 23  GKVRMYVCGVTPYDVTHLGHAATYIWVDVLTRLLRQLG--TDVEVCRNVTDVDDVLLDAA 80

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           R+         +     +     F +D   L    PTH+PRA N +  ++ L   ++  G
Sbjct: 81  RR------AGASYDAFAAVQQFHFEQDMAALGVRPPTHEPRAHNFVRNVVSLAAGLVDAG 134

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPMEP 202
            AY  N  + F  + +P     S  +  +        P+   K+NP D  +W+ S    P
Sbjct: 135 KAYVRNGSVYFRGADVPVRAGLSADEARQLAAEFNDEPDDPAKENPFDVAIWRASGEGVP 194

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPWG GRPGWH EC+AM+    G   DIH GG DL FPHH  E A +     +   A
Sbjct: 195 AWPSPWGPGRPGWHAECAAMAMTVFGPALDIHAGGADLRFPHHAYEAALAEALTGVRPFA 254

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             W+  G ++  GRKM+KS GN + +++LL               R+ ++   + +P +F
Sbjct: 255 RTWLRVGMVHHGGRKMAKSAGNLVLVSDLLAAHPAAAL-------RMYVVHRRWPQPWEF 307

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
             + L  AE  +      +   G  D   AVL+AL +DL+  +A Q       E      
Sbjct: 308 DARELQRAEADVDALFTAAARPGRSDGREAVLAALRDDLDVPTAFQV---AVDEGGAAAR 364

Query: 381 LLPIFNASAHILGI 394
           LL        +LG+
Sbjct: 365 LL------VDVLGL 372


>gi|323651394|gb|ADX97543.1| cysteinyl-tRNA synthetase [Terra1 virus]
          Length = 487

 Score =  297 bits (761), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 131/497 (26%), Positives = 199/497 (40%), Gaps = 84/497 (16%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           + I MYVCGPTVY+ +HIG+AR  ++ D++ R +     +     V NITDIDDKII+ A
Sbjct: 3   NTINMYVCGPTVYNDSHIGHARIYVMVDIINRTMTNILNQD-THLVMNITDIDDKIIKAA 61

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
             +        +   ++ K   +F +   +L    P    R +  I  +I  IQ II + 
Sbjct: 62  NDQLV------SWKTLSKKYEDKFFESMAKLGVAKPDVVIRVSESIDDIIKYIQQIINND 115

Query: 144 HAYE-ANNEIIFDTSSIPNYGSF--SRRKIDEQKMGTRVPEK--YHKKNPADFILWKRST 198
            AY  ++  + FDT    N G        I+EQ   +++  +    K++  DF LWK   
Sbjct: 116 FAYVTSDGSVYFDTIKYVNAGYILDCDIDIEEQTYESQIASEIINEKRHIKDFALWKSRA 175

Query: 199 PMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
             + G+   +          G PGWHIECSAM    +G   +IH GG+DL FPHH NE  
Sbjct: 176 DYDVGFFVEFIFNNAIIKTYGVPGWHIECSAMIERTIGDSVNIHFGGIDLKFPHHHNECL 235

Query: 251 QSCCADR----------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           Q+                EK    ++H G L +EG+KMSKS  NF TI+E+LET      
Sbjct: 236 QANAYYHPKYKPNTNINTEKWTQEFMHVGHLCVEGQKMSKSLKNFSTIDEVLETINSNE- 294

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL- 359
                 +R   +  ++R+P++F    +  A+                   ++   Y+D  
Sbjct: 295 ------MRWMFMQNNWRKPMEFNNAVIEHAKNFNQIINNFLNRTANYPFNIMDIKYSDNE 348

Query: 360 ------------NTVSAIQALHKLARESTKNHDLLPIFNASAH----------------- 390
                       N  + +    +         DL+   N                     
Sbjct: 349 IQFKKETQKNISNISNNLSK-FEFHHLVNNLIDLISKTNIYLDKPNPNESVVKKITNYIL 407

Query: 391 --ILGIEVCKEHLNKNISIAIEKLVQE-RLILLK---MKK---------FSSADYIRK-Q 434
             I  +    E  N      I K++ E R    K    K          F+  D  R  +
Sbjct: 408 NLITQLGFNYETNNSIDISNIMKVIVETRTDYRKITRNKNISKDVKNEIFNVLDSERNLR 467

Query: 435 LESKGFILEDYKNPDNG 451
           L S G  LED ++  + 
Sbjct: 468 LPSIGISLEDTRDSSSW 484


>gi|294657639|ref|XP_459935.2| DEHA2E14476p [Debaryomyces hansenii CBS767]
 gi|199432842|emb|CAG88179.2| DEHA2E14476p [Debaryomyces hansenii]
          Length = 780

 Score =  297 bits (760), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 118/436 (27%), Positives = 181/436 (41%), Gaps = 90/436 (20%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIF 154
              + S   ++F  D  RL  L P+   R + +IP +I  ++ II +G AY   +  + F
Sbjct: 241 FRKLPSFWEKKFNDDMGRLNVLPPSITTRVSEYIPDVIEFVEKIITNGFAYATKDGSVYF 300

Query: 155 DTSSI-----PNYGSFSRRKIDEQ-----KMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           DT+        +Y         +        G+    +  KKN ADF LWK S P EP W
Sbjct: 301 DTAKFENDPNHDYAKLQPWNKGDMSLINDGEGSLSTGQDTKKNAADFALWKGSKPGEPSW 360

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            S WG GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N 
Sbjct: 361 PSKWGEGRPGWHIECSVMASDITGQTMDIHSGGVDLCFPHHDNELAQSEAYFDNKQWVNY 420

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++HNG L+++G+KMSKS  NFITI E L         + +  +RL   ++++ +PIDF  
Sbjct: 421 FMHNGHLHIQGQKMSKSLKNFITIEEALND-------FTSRQLRLVFALSYWEKPIDFKD 473

Query: 325 QRLTE---AEILLSKW-----------------------------PQTSTSKGIIDPAVL 352
             + E    E  +SK+                              Q   +         
Sbjct: 474 SLIKEVKSWESSVSKFFTTVRALNNDYKHTLAEGGYVSKKLSQAERQLYDNLTKAQTETH 533

Query: 353 SALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASAHILGIEV 396
           +A  ++L++   ++ + +L  +S                    ++         ILG E 
Sbjct: 534 AAFCDNLSSPLVLRTIQELVSKSNNYIQSCATGENELRIEVLLEISSWIVKILKILGFET 593

Query: 397 CKEHL----------------NKNISIAIEKLVQERLILLK---MK----KF-SSADYIR 432
             + L                       ++ L Q R  +      K     F +++D IR
Sbjct: 594 RSDKLGWLDSNGSESEGSASKEDIAMPYVKALSQFRDAIRNMAINKSSFGDFLNASDSIR 653

Query: 433 KQLESKGFILEDYKNP 448
             L + G  L+D  N 
Sbjct: 654 SDLINLGISLDDRPNG 669



 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 1/87 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYN+L R   EF  +  ++I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G  
Sbjct: 43  LHIYNSLTRSKDEFIPLRNNHITWYCCGPTVYDHSHMGHARNYVSTDICRRILQDYFGYN 102

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIP 91
            V +++N+TDIDDKII  ARQE+    
Sbjct: 103 -VKFIQNVTDIDDKIIIAARQEYLFEQ 128


>gi|256272357|gb|EEU07340.1| YNL247W-like protein [Saccharomyces cerevisiae JAY291]
          Length = 767

 Score =  296 bits (759), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 122/447 (27%), Positives = 190/447 (42%), Gaps = 86/447 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++   +I   +    + +   Q+F  D   L  L PT   R + ++P++I  +Q II +
Sbjct: 221 DKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDN 280

Query: 143 GHAYE-ANNEIIFDTSSI-----PNYGS---FSRRKID---EQKMGTRVPEKYHKKNPAD 190
           G+AY  ++  + FDT         +Y     +++ ++D   + +          KK+  D
Sbjct: 281 GYAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNND 340

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S   EP WESPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 341 FALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELA 400

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS      ++  N ++H G L++EG+KMSKS  NFITI E L       + +    +RLA
Sbjct: 401 QSEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLA 453

Query: 311 MLMTHYREPIDFTVQRLTEAE----------ILLSKWPQTSTSKGIIDPAV--------- 351
                +   +DF    + E +            +      + S G I             
Sbjct: 454 FASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLA 513

Query: 352 ---------LSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHIL 392
                     SA  ++L+T  A++ L +L  +S           K   L+ I +    IL
Sbjct: 514 DFVESESKVHSAFCDNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKIL 573

Query: 393 GI-------------------EVCKEHLNKNISIAIEKL----VQERLILLKM---KKF- 425
            I                   +     L   +   ++ L       R + +K    K+F 
Sbjct: 574 RIIGFPSRPDNLGWTAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFL 633

Query: 426 SSADYIRKQ-LESKGFILEDYKNPDNG 451
              D IR + L +    L D +N  + 
Sbjct: 634 QLTDKIRNEDLLNLNVAL-DDRNGQSA 659



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI 92
             V +V+N+TDIDDKII RARQ +     
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNYLFDNF 123


>gi|221043810|dbj|BAH13582.1| unnamed protein product [Homo sapiens]
          Length = 341

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 104/264 (39%), Positives = 141/264 (53%), Gaps = 21/264 (7%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
            V  ITD+DDKII+RA +      +N + + + S   + F +D   L  L PT   R T 
Sbjct: 1   MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTE 54

Query: 128 HIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHK 185
           +IPQ I  I+ II  G+AY  A   + FD  S  + YG                P    K
Sbjct: 55  NIPQTISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPGPVG----EPADSDK 110

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++ +DF LWK + P E  W SPWG GRPGWHIECSA++S   G   DIH GG+DL FPHH
Sbjct: 111 RHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHH 170

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWP 303
           ENEIAQ     + E+  N ++H+G L+ +G   KMSKS  N+ITI + L       +++ 
Sbjct: 171 ENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFL-------KTFS 223

Query: 304 APVIRLAMLMTHYREPIDFTVQRL 327
             V R   L + YR  ID++   +
Sbjct: 224 PDVFRFFCLRSSYRSAIDYSDSAM 247


>gi|307210717|gb|EFN87140.1| Cysteinyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 729

 Score =  296 bits (758), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 109/418 (26%), Positives = 173/418 (41%), Gaps = 78/418 (18%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           ++     +F KD   L  L P+   R + ++P++I  +Q II +G AY +N  + FD S 
Sbjct: 205 LSKHWESEFHKDMDALNVLKPSVLTRVSEYVPEIIAFVQQIIDNGLAYGSNGSVYFDVSK 264

Query: 159 IPNYGSFSRRKIDEQKMGTR-------VPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                     K+  +  G           +   K++  DF LWK S   EP W+SPWG+G
Sbjct: 265 FDKQEKHFYAKLVPEAYGDTSSDLSVTEDKLSEKRSLTDFALWKSSKAGEPWWDSPWGKG 324

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQ+            ++H+G L
Sbjct: 325 RPGWHIECSVMASVICGENLDIHTGGVDLKFPHHDNELAQAEAYFDNSHWVKYFLHSGHL 384

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
            + G KMSKS  NF+TI + L       +   A  +RLA L+  +++ +D++   +  A 
Sbjct: 385 TIAGCKMSKSLKNFVTIQDAL-------KKHSARQLRLAFLLHSWKDTLDYSDNTMNMAV 437

Query: 331 --EILLS-----------------------KWPQTSTSKG----IIDPAVLSALYNDLNT 361
             E  L+                       KW  +         +   +V  AL ++++T
Sbjct: 438 QYEKFLNEFFLNIKCRIRSLGKKTTIDTFAKWTDSEMELNRKFQVAKHSVHKALCDNIDT 497

Query: 362 VSAIQALHKLARESTKN------------HDLLPIFNASAHIL----------GIEVCKE 399
            S +  + +L  +S                D+         I           G  +  E
Sbjct: 498 RSVLDTIRELVVDSNVYMSQNKNPNTLLLRDIAVYITKMFVIFGAISSTHDSIGFPIDDE 557

Query: 400 HLNKNISIAIEKLVQE--------RLILLKMKK---FSSADYIRKQ-LESKGFILEDY 445
            +  N+   +   ++         R     +K        D +R   L + G  LED 
Sbjct: 558 AVGTNVEETVMPYLEILANFRKKVRNCAKTLKANDILQECDILRDDILPNVGVRLEDS 615



 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 1/95 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YN+L RK   F     + I  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LQLYNSLTRKKEVFVPQFGNRILWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
            V YV NITDIDDKII+RARQ +      +    +
Sbjct: 80  -VLYVMNITDIDDKIIKRARQNYLYEKYVEENHNL 113


>gi|6324082|ref|NP_014152.1| hypothetical protein YNL247W [Saccharomyces cerevisiae S288c]
 gi|1730840|sp|P53852|SYC_YEAST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1255971|emb|CAA65497.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|1302287|emb|CAA96154.1| unnamed protein product [Saccharomyces cerevisiae]
 gi|285814418|tpg|DAA10312.1| TPA: hypothetical protein YNL247W [Saccharomyces cerevisiae S288c]
          Length = 767

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 122/447 (27%), Positives = 190/447 (42%), Gaps = 86/447 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++   +I   +    + +   Q+F  D   L  L PT   R + ++P++I  +Q II +
Sbjct: 221 DKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDN 280

Query: 143 GHAYE-ANNEIIFDTSSI-----PNYGS---FSRRKID---EQKMGTRVPEKYHKKNPAD 190
           G+AY  ++  + FDT         +Y     +++ ++D   + +          KK+  D
Sbjct: 281 GYAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNND 340

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S   EP WESPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 341 FALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELA 400

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS      ++  N ++H G L++EG+KMSKS  NFITI E L       + +    +RLA
Sbjct: 401 QSEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLA 453

Query: 311 MLMTHYREPIDFTVQRLTEAE----------ILLSKWPQTSTSKGIIDPAV--------- 351
                +   +DF    + E +            +      + S G I             
Sbjct: 454 FASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLA 513

Query: 352 ---------LSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHIL 392
                     SA  ++L+T  A++ L +L  +S           K   L+ I +    IL
Sbjct: 514 DFVESESKVHSAFCDNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKIL 573

Query: 393 GI-------------------EVCKEHLNKNISIAIEKL----VQERLILLKM---KKF- 425
            I                   +     L   +   ++ L       R + +K    K+F 
Sbjct: 574 RIIGFPSRPDNLGWAAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFL 633

Query: 426 SSADYIRKQ-LESKGFILEDYKNPDNG 451
              D IR + L +    L D +N  + 
Sbjct: 634 QLTDKIRNEDLLNLNVAL-DDRNGQSA 659



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI 92
             V +V+N+TDIDDKII RARQ +     
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNYLFDNF 123


>gi|255716136|ref|XP_002554349.1| KLTH0F03168p [Lachancea thermotolerans]
 gi|238935732|emb|CAR23912.1| KLTH0F03168p [Lachancea thermotolerans]
          Length = 773

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 105/365 (28%), Positives = 165/365 (45%), Gaps = 62/365 (16%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++   +I   +    + +   ++F KD   L  L P+   R + ++P+++  ++ II +
Sbjct: 225 DKESGSTINEPEIFRKLPAFWEREFNKDMAALNVLEPSVTTRVSEYVPEIVDFVKRIIDN 284

Query: 143 GHAYEA-NNEIIFDTSSI-----PNYGS---FSRRKID----EQKMGTRVPEKYHKKNPA 189
           G+AY   +  + FDT +       +Y     +++ K+D     +   +       K++  
Sbjct: 285 GYAYATGDGSVYFDTVAFDKSEKHDYAKCQPWNKGKLDLINDAEGSLSNFSSTNGKRSSN 344

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF LWK S P EP W+SPWG+GRPGWHIECS M+   LG   DIH GG+DL FPHH+NEI
Sbjct: 345 DFALWKSSKPGEPEWDSPWGKGRPGWHIECSVMACDVLGPNIDIHTGGIDLAFPHHDNEI 404

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS       +  N ++H G L++EG+KMSKS  NFITI E L       + + A  +RL
Sbjct: 405 AQSEAFYDNHQWVNYFLHTGHLHIEGQKMSKSLKNFITIGEAL-------KKYSARQLRL 457

Query: 310 AMLMTHYREPIDFTVQRLTE--------------------------------AEILLSKW 337
           A     +   +DF    L E                                ++ L  K 
Sbjct: 458 AFSSAQWNSQLDFKEVLLVEVKSLEQSFNNFFRNARALKADLAHREDMGQHVSKKLGDKE 517

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNA 387
               T        V +A  ++L+T  A++ L +L  ++           +   LL +   
Sbjct: 518 KSLLTELAAFQDKVHNAFCDNLSTPVALKFLSELVTKANLYISSAGSDIRIEPLLEVVRY 577

Query: 388 SAHIL 392
              IL
Sbjct: 578 ITKIL 582



 Score =  128 bits (321), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 2/99 (2%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            ++K+YN+L R+  +F  I     +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 44  PRLKLYNSLTRQKEDFVTISGDKNVTWYSCGPTVYDSSHMGHARNYVSIDINRRILQDYF 103

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           G + + +V+N+TD+DDKII RARQ H           +T
Sbjct: 104 GYR-IRFVQNVTDVDDKIILRARQSHLFERFAAENKEVT 141


>gi|323335869|gb|EGA77147.1| YNL247W-like protein [Saccharomyces cerevisiae Vin13]
          Length = 767

 Score =  296 bits (758), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 122/447 (27%), Positives = 190/447 (42%), Gaps = 86/447 (19%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++   +I   +    + +   Q+F  D   L  L PT   R + ++P++I  +Q II +
Sbjct: 221 DKELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDN 280

Query: 143 GHAYE-ANNEIIFDTSSI-----PNYGS---FSRRKID---EQKMGTRVPEKYHKKNPAD 190
           G+AY  ++  + FDT         +Y     +++ ++D   + +          KK+  D
Sbjct: 281 GYAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNND 340

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S   EP WESPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 341 FALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELA 400

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS      ++  N ++H G L++EG+KMSKS  NFITI E L       + +    +RLA
Sbjct: 401 QSEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLA 453

Query: 311 MLMTHYREPIDFTVQRLTEAE----------ILLSKWPQTSTSKGIIDPAV--------- 351
                +   +DF    + E +            +      + S G I             
Sbjct: 454 FASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLA 513

Query: 352 ---------LSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHIL 392
                     SA  ++L+T  A++ L +L  +S           K   L+ I +    IL
Sbjct: 514 DFVESESKVHSAFCDNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKIL 573

Query: 393 GI-------------------EVCKEHLNKNISIAIEKL----VQERLILLKM---KKF- 425
            I                   +     L   +   ++ L       R + +K    K+F 
Sbjct: 574 RIIGFPSRPDNLGWAAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFL 633

Query: 426 SSADYIRKQ-LESKGFILEDYKNPDNG 451
              D IR + L +    L D +N  + 
Sbjct: 634 QLTDKIRNEDLLNLNVAL-DDRNGQSA 659



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRXVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI 92
             V +V+N+TDIDDKII RARQ +     
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNYLFDNF 123


>gi|151944300|gb|EDN62578.1| conserved protein [Saccharomyces cerevisiae YJM789]
          Length = 767

 Score =  295 bits (757), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 129/493 (26%), Positives = 199/493 (40%), Gaps = 96/493 (19%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN-DAI 96
             H+  AR  I                 +        + D  +    +E  S   N +  
Sbjct: 184 PMHVTAARNAI---------ESITKGDSMDAEVAFEKVKDVTVPLLDKELGSTISNPEIF 234

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFD 155
             + +   Q+F  D   L  L PT   R + ++P++I  +Q II +G+AY  ++  + FD
Sbjct: 235 RQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNGYAYATSDGSVYFD 294

Query: 156 TSSI-----PNYGS---FSRRKID---EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           T         +Y     +++ ++D   + +          KK+  DF LWK S   EP W
Sbjct: 295 TLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDFALWKASKAGEPEW 354

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
           ESPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS      ++  N 
Sbjct: 355 ESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQSEARFDNQQWINY 414

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G L++EG+KMSKS  NFITI E L       + +    +RLA     +   +DF  
Sbjct: 415 FLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLAFASVQWNNQLDFKE 467

Query: 325 QRLTEAE----------ILLSKWPQTSTSKGIIDPAV------------------LSALY 356
             + E +            +      + S G I                       SA  
Sbjct: 468 SLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLADFVESESKVHSAFC 527

Query: 357 NDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHILGI------------ 394
           ++L+T  A++ L +L  +S           K   L+ I +    IL I            
Sbjct: 528 DNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKILRIIGFPSRPDNLGW 587

Query: 395 -------EVCKEHLNKNISIAIEKL----VQERLILLKM---KKF-SSADYIRKQ-LESK 438
                  +     L   +   ++ L       R + +K    K+F    D IR + L + 
Sbjct: 588 AAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFLQLTDKIRNEDLLNL 647

Query: 439 GFILEDYKNPDNG 451
              L D +N  + 
Sbjct: 648 NVAL-DDRNGQSA 659



 Score =  124 bits (312), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 2/89 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 36  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 95

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI 92
             V +V+N+TDIDDKII RARQ +     
Sbjct: 96  D-VQFVQNVTDIDDKIILRARQNYLFDNF 123


>gi|320580808|gb|EFW95030.1| Cysteinyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 737

 Score =  295 bits (757), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 109/429 (25%), Positives = 174/429 (40%), Gaps = 85/429 (19%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
           +     +S    ++ +D   L  L PT   R + ++P+++  +Q II  G+AY  ++  +
Sbjct: 203 EIFKACSSFWEHKYDEDMAALNVLPPTIVTRVSEYVPEIVAFVQQIIDKGYAYATSDGSV 262

Query: 153 IFDTSSI-----PNYGSF---SRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPG 203
            F+ +         Y      S+  ++  + G   +     K N +DF LWK S   EP 
Sbjct: 263 YFNVAKFDKDPAHEYAKLQPWSKGNLELLEDGEGSLSAAQGKLNASDFALWKASKAGEPS 322

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W SPWG GRPGWHIECS M++ ++G   DIH GG+DL FPHH+NE+AQS      ++  N
Sbjct: 323 WPSPWGPGRPGWHIECSVMAADFVGDKLDIHSGGIDLAFPHHDNELAQSEAHYDCKQWVN 382

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
            ++H G L++EG+KMSKS  NFITI E L         + A  +RL   +  +   +DF 
Sbjct: 383 YFLHTGHLHIEGQKMSKSLKNFITIEEALGR-------YSARQLRLCFALVQWNNALDFK 435

Query: 324 VQRLTE---AEILLSKW-----------------------------PQTSTSKGIIDPAV 351
              L E    E  LSK+                              +           V
Sbjct: 436 ESLLNEVRSTESSLSKFFKNVRAIKADTDHRLRAGEVISKKYGQLEKRLVAELAQCKKNV 495

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHILGIE--- 395
            +A  ++L+T  A++AL +L   +      +                     +LG +   
Sbjct: 496 HAAFCDNLSTPQALRALLELVNSANTYIGAVGADLRVEPLVQSALYITRILRVLGFDTRK 555

Query: 396 ----VCKEHLNKNISIAIEKLV-----------QERLILLKMKKFS----SADYIRK-QL 435
                  E  + +     E L+             R   +    +     + D +R  +L
Sbjct: 556 DGLGWEDEQADTSSGNLEEALMPYLKVLSNFRDLVRSSAIAKADYKVFLDATDTLRDKEL 615

Query: 436 ESKGFILED 444
                 L+D
Sbjct: 616 LQLNVSLDD 624



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/144 (29%), Positives = 62/144 (43%), Gaps = 27/144 (18%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + +YNTL R    F       +  Y CGPTVY+ +H+G+AR  +  D+  R+L+ Y+
Sbjct: 12  DAPLVLYNTLTRSKVPFVPSSSDEVTWYSCGPTVYNSSHMGHARNYVTIDINRRILQDYF 71

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII-------TSKNTQQFVK----- 109
           G   V +V+N+TDIDDKII +ARQEH         S +         +    ++      
Sbjct: 72  GYN-VKFVQNVTDIDDKIIIKARQEHLFGEFARKHSAVDSQLRETAQRALAAYLAKNLPE 130

Query: 110 --------------DTTRLACLAP 119
                         D   L    P
Sbjct: 131 YEGTVPFDEWARSLDLAALGLQKP 154


>gi|156848081|ref|XP_001646923.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156117605|gb|EDO19065.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 769

 Score =  295 bits (757), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 118/442 (26%), Positives = 177/442 (40%), Gaps = 92/442 (20%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEI 152
           +    + +    Q+  D  +L  L P    R + ++P++I  ++ II +G+AY A+   +
Sbjct: 230 EIFRKLPAYWEHQYDNDMAKLNVLPPNVTTRVSEYVPEIIEFVEKIISNGYAYAADDGSV 289

Query: 153 IFDTSSIPNYGSFSRRKI------------DEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
            FDT +       S  K             D +   +       KK+P+DF LWK S P 
Sbjct: 290 YFDTQNFDTSKDHSYAKCQPWNKGHLDLINDAEGSLSNFSNTNGKKSPSDFALWKASKPG 349

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           EP WESPWG+GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS       +
Sbjct: 350 EPEWESPWGKGRPGWHIECSVMASDILGQNIDIHSGGIDLAFPHHDNELAQSEAHFDNNQ 409

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
             N ++H G L++EG+KMSKS  NFITI+E L+        + A  +RLA     +   +
Sbjct: 410 WINYFLHTGHLHIEGQKMSKSLKNFITIDEALKM-------YSARQLRLAFASVQWNNQL 462

Query: 321 DFTVQRLTEAEILLSKW---------------------------------PQTSTSKGII 347
           DF    + E     + +                                  Q      I 
Sbjct: 463 DFKESLINEVRSTETSFNNFFANVRALNNDYINIISQPNGFVSKKLGSLERQLLEDFKIA 522

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHILGI 394
              V  A  ++L T  A++AL  L   +                  +         I+G 
Sbjct: 523 QEKVDIAFCDNLATPQALKALSDLVTLTNTYISSVGNDIRIEPIISICKFITKIFGIIGF 582

Query: 395 EVCKEHL----------------NKNISIAIEKLVQERLILLK---MK-KF----SSADY 430
            V  + L                 + +   ++ L + R I+      K  +       D 
Sbjct: 583 PVRSDGLGWENADSSNAANGSSVEETVMPYVQCLSKFRDIVRSLSIEKANYVEFLKLTDQ 642

Query: 431 IR-KQLESKGFILEDYKNPDNG 451
           IR   L      L D +N  + 
Sbjct: 643 IRDDDLLKLNIAL-DDRNGQSA 663



 Score =  129 bits (326), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           K  +K+YNTL R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y
Sbjct: 36  KSVLKVYNTLTRSKEEFIPRSGTKEVSWYSCGPTVYDASHMGHARNYVSIDINRRILQDY 95

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           +G   + +V+N+TDIDDKII RARQ H     
Sbjct: 96  FGYN-INFVQNVTDIDDKIILRARQNHLFEEY 126


>gi|164425498|ref|XP_960203.2| hypothetical protein NCU05642 [Neurospora crassa OR74A]
 gi|157070948|gb|EAA30967.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 806

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 107/382 (28%), Positives = 164/382 (42%), Gaps = 62/382 (16%)

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
           D+    ++   +E          + +T    + F  D   L  L P    R T ++PQ++
Sbjct: 187 DVLLPYLDSLYKETIDTSDQTIFTDLTKTMEKAFADDMEALNVLPPDVITRVTEYVPQIV 246

Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYH 184
             ++ II  G AYEA+  + FD  +    G+   R          + E+  G+       
Sbjct: 247 AFVEQIIQKGFAYEADGSVYFDIGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGG 306

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK   DF LWK+S P EP W SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPH
Sbjct: 307 KKRSGDFALWKKSKPGEPYWPSPWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPH 366

Query: 245 HENEIAQSC-----CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           H+NE+AQS      C          ++H G L++ G KMSKS  NF TI + L +     
Sbjct: 367 HDNELAQSEAYFHDCCKGEHTWVKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAS----- 421

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLS--------KWPQTSTSKGIID 348
            ++ A  +R+  L++ + + ++ +     +A   E  L         +  +   S GI D
Sbjct: 422 -TYTARNMRIVFLLSRWNDGVEISPDMRKQADNWETTLDNFFTNIKARLSEVDASSGIKD 480

Query: 349 --------------------PAVLSALYNDLNTVSAIQALHKLAREST-----------K 377
                                 + +AL N  +T +A+Q L KL R +             
Sbjct: 481 LSLSEDAGARGLLEDFEQAKKDLDAALRNSFDTPTAMQVLLKLVRNANIYMNSSNPNVQA 540

Query: 378 NHDLLPIFNASAHILGIEVCKE 399
              +         + G++   +
Sbjct: 541 LESVARWVTKIVGVFGLDASAQ 562



 Score =  110 bits (275), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 5/119 (4%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           I +++TL+      F   +   I  Y CGPTVYD +H+G+AR  +  D++ R+L +Y+  
Sbjct: 4   ITVHSTLKPGPPVPFVPKEEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYFDY 63

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAP 119
           K V +V N TD+DDKII +AR++       +       I +   + F   T  L  LAP
Sbjct: 64  K-VNFVMNYTDVDDKIIIKARRKRLLELEKEKPYTPEQIHNLIFKAFQAYTKSLPLLAP 121


>gi|187631651|sp|Q4A947|SYC_MYCHJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|144227739|gb|AAZ44724.2| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 406

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 129/422 (30%), Positives = 198/422 (46%), Gaps = 35/422 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           I+  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 6   INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 63

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++      +  + + +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 64  EKAQE------LGISEAELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 117

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK++  
Sbjct: 118 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESL----LDKNTKKTKSKNDFVLWKKTQK 173

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 174 G-LFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 231

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS  N +               +   +IR   L  +   
Sbjct: 232 NPIAENWFRSGFVNLNGKKMAKSLNNVLLAKNF-------SHKYNPDIIRSIFLSINPTV 284

Query: 319 PIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           PI+ T + +   + L+ K+ +         K      V   L   L         + L  
Sbjct: 285 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLN--LFIEGKFAKANFLIM 342

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           E  K  +   I     + L     K  L+       ++ ++    L+  K +S AD IR+
Sbjct: 343 ELIKQKENSTIRKIFLN-LRFNFTKMRLDPES----QEKIKNWNKLIMDKNYSEADKIRE 397

Query: 434 QL 435
           +L
Sbjct: 398 EL 399


>gi|311977536|ref|YP_003986656.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|81999783|sp|Q5UP36|SYC_MIMIV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|55416788|gb|AAV50438.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
 gi|308204215|gb|ADO18016.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
          Length = 509

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 133/514 (25%), Positives = 205/514 (39%), Gaps = 102/514 (19%)

Query: 19  QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           + I P+  +MYVCGPTVY+ AHIG+AR  ++ D++ R +      K    V N+TDIDDK
Sbjct: 7   ETILPTVTKMYVCGPTVYNDAHIGHARIYVIVDLINRTMNKIL-NKPTHLVMNVTDIDDK 65

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
           II  ++ +            +   +   F    ++L    P    R T  I  ++  IQ 
Sbjct: 66  IIRESKNK------GITWLELARLHENSFFDCMSKLNVTRPDSVIRVTESISDIVLYIQQ 119

Query: 139 IILHGHAY-EANNEIIFDTSSIPNYGS-FSRRKIDEQKMGTRV---PEKYHKKNPADFIL 193
           II +G AY  +++ + FD+      G  FS    +E++    +        KK+  DF L
Sbjct: 120 IINNGFAYIVSDSSVYFDSIEYKKAGYEFSEIDDEEEQQYESLLSKEIVSQKKHHKDFAL 179

Query: 194 WKRSTPMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           WK  +  + G+   +          G PGWHIECSAM    LG   DIH GG+DL FPHH
Sbjct: 180 WKGRSESDVGFNVEFIFDNQTFKSFGVPGWHIECSAMIKKTLGNSIDIHFGGIDLKFPHH 239

Query: 246 ENEIAQSCCADRI-------------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
            NE  Q+                         +IH G L ++G+KMSKS  NF TI E+L
Sbjct: 240 YNECLQANAYHHPMYNPLHQSDTMIFHTWTREFIHVGHLCIKGQKMSKSLKNFSTIKEML 299

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----------ILLSKWPQTST 342
           +          +   R   + T +++ +DFT   ++ A+            +S +P   +
Sbjct: 300 D-------KINSNQFRWLFMSTKWKQQVDFTDGLISIAKELDFTVVNFVNRVSNYPFEVS 352

Query: 343 SKGIIDPAVLSALYNDL-----NTVSAIQAL-HKLARESTKNHDLLPIFNASAHILGIEV 396
                D   L  L++D         S +     ++         +  +   +   L +  
Sbjct: 353 DVEFNDKETL--LHDDFYRIQQRIYSYLTEFKFEMV-----ARSIQHLIGTTNVYLDLPR 405

Query: 397 CKEHL----------------------NKNISIAIEK----LVQERLILLK--------- 421
             E +                      N + S  I+     L++ R  L +         
Sbjct: 406 PNESIVGKIRDYLLDLLDKLGFIYRVGNSSSSHKIKDLMNILIETRSQLRQLTRNPDLSP 465

Query: 422 --MKK-FSSADYIRK-QLESKGFILEDYKNPDNG 451
              K+ F   D  R  QL   G ILED K+    
Sbjct: 466 GIKKQLFDILDRQRNIQLPDIGIILEDSKDSSLW 499


>gi|170584986|ref|XP_001897270.1| cysteinyl tRNA synthetase protein 1, isoform b [Brugia malayi]
 gi|158595316|gb|EDP33879.1| cysteinyl tRNA synthetase protein 1, isoform b, putative [Brugia
           malayi]
          Length = 768

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 116/436 (26%), Positives = 177/436 (40%), Gaps = 97/436 (22%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +  K   +F+ D   L  L PT   R + +IP++I  ++ II +G+ Y   +  + FDT 
Sbjct: 223 LAKKYENEFLCDMASLNVLPPTVLTRVSEYIPEIIAYVEKIINNGYGYVTKDGSVYFDTV 282

Query: 158 SIPNYGSFSRRKI------DEQKMGTRVPEKYH---------KKNPADFILWKRSTPMEP 202
              N    S  K+      D +++   + E            K+N  DF LWK S   EP
Sbjct: 283 KFDNSEKHSYCKLVPEAFADNEQLMKNMRESEGDLSMGNLENKRNVTDFALWKASKDGEP 342

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPWG+GRPGWHIECSAMSS   G   DIH GG DL FPHH+NEIAQ      IE   
Sbjct: 343 YWNSPWGKGRPGWHIECSAMSSKICGTSLDIHAGGFDLKFPHHDNEIAQVEAYYDIENWV 402

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N ++H G L + G KMSKS  NFITI E L       + + A  +R+  LM ++ + +D+
Sbjct: 403 NYFLHCGSLRIAGLKMSKSLKNFITIREAL-------KHYSARQLRILFLMHNWNDVLDY 455

Query: 323 TVQRLTEA--------------EILLSKWPQTSTSKGI----------------IDPAVL 352
           +   +  A              +  L K+ + + S+                  I   + 
Sbjct: 456 SAASMERALQFEKISXEFFLLVKDYLRKYYKPNNSESYQKYNDEELLLVNNFCKIKTEIN 515

Query: 353 SALYNDLNTVSAIQALHKLARESTKN-----------------HDLLPIFNASAHILGIE 395
            AL + ++T + ++ L +L                         ++     +   I G+ 
Sbjct: 516 IALCDSVDTRTVVEKLRELIAIGNAYFIEMEKKEDSVPNCLLLRNIALYMTSLLKIFGVI 575

Query: 396 V-----------------------CKEHLNKNISIAIEKLVQERLILLKMK---KFSSAD 429
                                    +E L   ++  ++     R +  + K        D
Sbjct: 576 PQNVEIGFPIEHNGISNHDISITSKEEMLMPYLTALVDFRENVRKVAREQKIIGILEECD 635

Query: 430 YIRKQ-LESKGFILED 444
            +R + L   G  LED
Sbjct: 636 KLRDEVLPELGVRLED 651



 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YN+  RK   F  ++P  ++ Y+CGPTVYD +HIG+AR  + FD+L R+L+ Y+
Sbjct: 32  PPQLCLYNSFTRKKELFVPLNPKQVKWYICGPTVYDSSHIGHARAYLSFDILRRVLQDYF 91

Query: 62  GEKCVTYVRNITDIDDKIIERARQ 85
           G   + Y+ NITDIDDKII+RARQ
Sbjct: 92  GYD-IQYIMNITDIDDKIIKRARQ 114


>gi|289622623|emb|CBI50892.1| unnamed protein product [Sordaria macrospora]
          Length = 807

 Score =  295 bits (755), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 107/382 (28%), Positives = 164/382 (42%), Gaps = 62/382 (16%)

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
           D+    ++   +E          + +T    Q F  D   L  L P    R T ++PQ++
Sbjct: 187 DVLLPYLDSLYKETIDTSDQTIFTNLTKTMEQAFADDMEALNVLPPDVITRVTEYVPQIV 246

Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYH 184
             ++ II  G AYEA+  + FD  +    G+   R          + E+  G+       
Sbjct: 247 AFVEQIIQKGFAYEADGSVYFDIGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGG 306

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           KK   DF LWK+S P EP W SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPH
Sbjct: 307 KKRSGDFALWKKSKPGEPYWPSPWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPH 366

Query: 245 HENEIAQSC-----CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           H+NE+AQS      C          ++H G L++ G KMSKS  NF TI + L +     
Sbjct: 367 HDNELAQSEAYFHDCCKGEHTWVKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAS----- 421

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLS--------KWPQTSTSKGIID 348
            ++ A  +R+  L++ + + ++ +     +A   E  L         +  +   S G+ D
Sbjct: 422 -TYTARNMRIVFLLSRWNDGVEISPDMRKQADNWETTLDNFFTNIKARLSEVDASSGLKD 480

Query: 349 --------------------PAVLSALYNDLNTVSAIQALHKLAREST-----------K 377
                                 + +AL N  +T +A+Q L KL R +             
Sbjct: 481 LSLSEDVGAKGLLEDFESAKKDLDAALRNSFDTPTAMQVLLKLVRNANIYMNSGNPNMQA 540

Query: 378 NHDLLPIFNASAHILGIEVCKE 399
              +         + G++   +
Sbjct: 541 LESVARWVTKIVGVFGLDASAQ 562



 Score =  109 bits (272), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 4/106 (3%)

Query: 17  EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
            F   +   I  Y CGPTVYD +H+G+AR  +  D++ R+L +Y+  K V +V N TD+D
Sbjct: 17  PFVPREEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMHYFDYK-VNFVMNYTDVD 75

Query: 77  DKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAP 119
           DKII +AR++       +       I     + F   T  L  LAP
Sbjct: 76  DKIIIKARRKRLLELEKEKPYTPEQIRDLIFKAFQAYTKNLPLLAP 121


>gi|68467189|ref|XP_722256.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
 gi|68467418|ref|XP_722142.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
 gi|46444091|gb|EAL03368.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
 gi|46444215|gb|EAL03491.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
          Length = 781

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 114/436 (26%), Positives = 181/436 (41%), Gaps = 88/436 (20%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIF 154
              + S   +++ +D  RL  L P+   R + ++P +I  +  I+ +G+AY+ +   + F
Sbjct: 242 FRKLPSYWEKRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNGYAYKTDDGSVYF 301

Query: 155 DTSSI----PNYGSFSRRKIDEQKM----GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           DT        +Y         +  +       +     K+N +DF LWK S P EP W+S
Sbjct: 302 DTVKYEHSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALWKASKPGEPAWDS 361

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
            WG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++
Sbjct: 362 KWGKGRPGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFM 421

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           HNG L+++G+KMSKS  NFITI+E L         + A  +RL   +  + +P+DF    
Sbjct: 422 HNGHLHIQGQKMSKSLKNFITIDEALND-------FSARQLRLVFALNAWEKPLDFKDSL 474

Query: 327 LTEAEILLSKW--------------------------------PQTSTSKGIIDPAVLSA 354
           ++E + + S +                                 Q           V +A
Sbjct: 475 ISEVKSIESTFSKFFTNVRALNSDYKHKTENGGYVSRKITDIEKQLFNDLEQAQDEVDAA 534

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASAHILGIEVCK 398
             ++L++  AI+ L  L  +S     L                         ILG E   
Sbjct: 535 FNDNLSSGQAIRVLQDLISKSNNYIQLTSTGQTELRIEVLIQVTNWIVKILEILGFEARS 594

Query: 399 EHL----------------NKNISIAIEKLVQERLILLK---MK----KF-SSADYIRKQ 434
           + L                       ++ L Q R  +      K    +F  ++D IR  
Sbjct: 595 DRLGWIDESEQTSVNGSSTEDVALPYVKALAQFRDSVRSLAINKAELNEFLKASDAIRSS 654

Query: 435 LESKGFILEDYKNPDN 450
           L   G  L+D  +  +
Sbjct: 655 LIGLGVSLDDRPDGTS 670



 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KIYN+L R   EF    P +I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 43  KPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYF 102

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSI 90
           G   + +V+N+TDIDDKII  ARQ++   
Sbjct: 103 GYN-IKFVQNVTDIDDKIIIAARQQYLFE 130


>gi|238878314|gb|EEQ41952.1| cysteinyl-tRNA synthetase [Candida albicans WO-1]
          Length = 781

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 114/436 (26%), Positives = 181/436 (41%), Gaps = 88/436 (20%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIF 154
              + S   +++ +D  RL  L P+   R + ++P +I  +  I+ +G+AY+ +   + F
Sbjct: 242 FRKLPSYWEKRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNGYAYKTDDGSVYF 301

Query: 155 DTSSI----PNYGSFSRRKIDEQKM----GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           DT        +Y         +  +       +     K+N +DF LWK S P EP W+S
Sbjct: 302 DTVKYEHSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALWKASKPGEPAWDS 361

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
            WG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++
Sbjct: 362 KWGKGRPGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFM 421

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           HNG L+++G+KMSKS  NFITI+E L         + A  +RL   +  + +P+DF    
Sbjct: 422 HNGHLHIQGQKMSKSLKNFITIDEALND-------FSARQLRLVFALNAWEKPLDFKDSL 474

Query: 327 LTEAEILLSKW--------------------------------PQTSTSKGIIDPAVLSA 354
           ++E + + S +                                 Q           V +A
Sbjct: 475 ISEVKSIESTFSKFFTNVRALNSDYKHKTENGGYVSRKITDIEKQLFNDLEQAQDEVDAA 534

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASAHILGIEVCK 398
             ++L++  AI+ L  L  +S     L                         ILG E   
Sbjct: 535 FNDNLSSGQAIRVLQDLISKSNNYIQLTSTGQTELRIEVLIQVTNWIVKILEILGFEARS 594

Query: 399 EHL----------------NKNISIAIEKLVQERLILLK---MK----KF-SSADYIRKQ 434
           + L                       ++ L Q R  +      K    +F  ++D IR  
Sbjct: 595 DRLGWIDESEQTSVNGSSTEDVALPYVKALAQFRDSVRSLAINKAELNEFLKASDAIRSS 654

Query: 435 LESKGFILEDYKNPDN 450
           L   G  L+D  +  +
Sbjct: 655 LIGLGVSLDDRPDGTS 670



 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KIYN+L R   EF    P +I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 43  KPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYF 102

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSI 90
           G   + +V+N+TDIDDKII  ARQ++   
Sbjct: 103 GYN-IKFVQNVTDIDDKIIIAARQQYLFE 130


>gi|256087600|ref|XP_002579954.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
 gi|238665453|emb|CAZ36193.1| cysteinyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 843

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 159/355 (44%), Gaps = 49/355 (13%)

Query: 63  EKCVTY-VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           E    Y + N  D     ++ A     SI  +     +     ++++ D   L  + P+ 
Sbjct: 195 ENPANYLILNARDAIADTLDAA--YGASISDHQIFEALARHFEKEYLVDMECLNIIPPSV 252

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-----YGSF---SRRKIDE 172
             R T +I  +I  ++ II +G AY   +  + FDT+   +     Y      +     +
Sbjct: 253 LVRVTEYIDPIIKYVKQIIDNGFAYVVPSGSVYFDTNRFASSPMHFYAKLVPTAYGDTSQ 312

Query: 173 QKMGTRVP-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            + G         KK+  DF LWK S P EP W SPWG+GRPGWHIECS M+S  LG   
Sbjct: 313 LESGEGELCITGEKKSSNDFALWKASKPGEPSWPSPWGKGRPGWHIECSVMASDILGDTL 372

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS          N ++H+G L + G KMSKS  NFITI + 
Sbjct: 373 DIHSGGVDLKFPHHDNELAQSEAYFGHSHWVNYFLHSGHLTISGCKMSKSLKNFITIRDA 432

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------------- 330
           L+T         +  IRL  L+  +R+ +D++V  L EA                     
Sbjct: 433 LKTH-------TSRQIRLIFLLHSWRDTMDYSVDTLAEAVGFEKQLIDFLYTCSNIQFLA 485

Query: 331 ------EILLSKWPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLARESTK 377
                 +  L +   +   + ++D    V  AL +  +T S +  +  L  E+  
Sbjct: 486 KQSLSNKQYLEETEDSDFKQTLVDIQHKVYDALCDSCDTRSVLDCIKVLMSEADS 540



 Score =  131 bits (330), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN+L  +   F   D  +++ Y CGPTVYD +H+G+AR  + FDV+ R+L  Y+ 
Sbjct: 51  PNLYLYNSLTSQKDLFIPQDGRHVKWYTCGPTVYDVSHLGHARTYVAFDVIRRVLMDYFN 110

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
            K VTYV NITDIDDKII+RARQ H           + 
Sbjct: 111 FK-VTYVLNITDIDDKIIKRARQNHLISDYQLKNPDLA 147


>gi|212535374|ref|XP_002147843.1| cysteinyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210070242|gb|EEA24332.1| cysteinyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 798

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 117/437 (26%), Positives = 186/437 (42%), Gaps = 61/437 (13%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+  +  D+    +++              + +T K  ++F++D   L  L P    R T
Sbjct: 208 TFYTDAQDVFLPYLDQLEGSKIDASDYSIFTKLTRKYEERFMRDLRDLNVLDPDELTRVT 267

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG---------SFSRRKIDEQKMG 176
            + PQ+   ++ I+ +  AY  ++  + FD  +  + G         S S  K+  +  G
Sbjct: 268 EYGPQIAQFVERIVENKFAYVTSDGSVYFDIKAFEDAGFPYARLEPWSRSDGKLVAEGEG 327

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
               +   K +P+DF LWK S P EP W S WG+GRPGWHIECSAM+S  LGK  DIH G
Sbjct: 328 ALTSKTTEKHSPSDFALWKASKPGEPSWSSQWGKGRPGWHIECSAMASDRLGKSIDIHSG 387

Query: 237 GLDLIFPHHENEIAQSCCA---DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           G+DL FPHH+NE+AQS         ++  N ++H G L+++G KMSKS  NF TI E LE
Sbjct: 388 GIDLAFPHHDNELAQSEAYWNTHTHDQWINYFLHMGHLSIQGSKMSKSLKNFTTIREALE 447

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL---TEAEILLSKW------------- 337
            K +  RS     +R+  L+ ++   I+ T   +      E  L+ +             
Sbjct: 448 RKDWTSRS-----LRIVFLLGNWNSGIEITEDVINFGNSWEDKLNNFFLKMKDLDLLKKS 502

Query: 338 -----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------- 382
                     +      AV   L +  NT +A+ A+  L  +                  
Sbjct: 503 SSGTDQSLGEALEATKAAVNEHLSDSFNTPAAMAAISDLVTKFNSADKATVNPEHVEQMG 562

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKF-----SSADYIRKQ-LE 436
               +  +I G+          I  +   + +E       K +     +  D +R++ L 
Sbjct: 563 KWVTSMVNIFGLNGAAPPDASEIGWSGIDVPEE------AKPYLYPLSALRDSLREKALS 616

Query: 437 SKGFILEDYKNPDNGQR 453
            +G  + D KN    Q 
Sbjct: 617 KEGISVADIKNIITSQE 633



 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 12/130 (9%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L +    F  +DP+   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y
Sbjct: 22  PSLKIYNSLTKTKVPFVPVDPNGRKVTWYACGPTVYDDSHLGHARNYVTTDIIRRILRDY 81

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII-------TSKNTQQFVKDTTR 113
           + +  V +V NITD+DDKII R RQ++       A   I            + ++  T  
Sbjct: 82  F-KFDVHFVMNITDVDDKIILRGRQQYLFNKFVSAHPTIDATVLDTAKAAYKAYL--TKN 138

Query: 114 LACLAPTHQP 123
           L  L P   P
Sbjct: 139 LRLLDPELPP 148


>gi|256087602|ref|XP_002579955.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
 gi|238665454|emb|CAZ36194.1| cysteinyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 814

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 106/355 (29%), Positives = 159/355 (44%), Gaps = 49/355 (13%)

Query: 63  EKCVTY-VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           E    Y + N  D     ++ A     SI  +     +     ++++ D   L  + P+ 
Sbjct: 166 ENPANYLILNARDAIADTLDAA--YGASISDHQIFEALARHFEKEYLVDMECLNIIPPSV 223

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-----YGSF---SRRKIDE 172
             R T +I  +I  ++ II +G AY   +  + FDT+   +     Y      +     +
Sbjct: 224 LVRVTEYIDPIIKYVKQIIDNGFAYVVPSGSVYFDTNRFASSPMHFYAKLVPTAYGDTSQ 283

Query: 173 QKMGTRVP-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
            + G         KK+  DF LWK S P EP W SPWG+GRPGWHIECS M+S  LG   
Sbjct: 284 LESGEGELCITGEKKSSNDFALWKASKPGEPSWPSPWGKGRPGWHIECSVMASDILGDTL 343

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH GG+DL FPHH+NE+AQS          N ++H+G L + G KMSKS  NFITI + 
Sbjct: 344 DIHSGGVDLKFPHHDNELAQSEAYFGHSHWVNYFLHSGHLTISGCKMSKSLKNFITIRDA 403

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------------- 330
           L+T         +  IRL  L+  +R+ +D++V  L EA                     
Sbjct: 404 LKTH-------TSRQIRLIFLLHSWRDTMDYSVDTLAEAVGFEKQLIDFLYTCSNIQFLA 456

Query: 331 ------EILLSKWPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLARESTK 377
                 +  L +   +   + ++D    V  AL +  +T S +  +  L  E+  
Sbjct: 457 KQSLSNKQYLEETEDSDFKQTLVDIQHKVYDALCDSCDTRSVLDCIKVLMSEADS 511



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/98 (43%), Positives = 59/98 (60%), Gaps = 1/98 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN+L  +   F   D  +++ Y CGPTVYD +H+G+AR  + FDV+ R+L  Y+ 
Sbjct: 22  PNLYLYNSLTSQKDLFIPQDGRHVKWYTCGPTVYDVSHLGHARTYVAFDVIRRVLMDYFN 81

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
            K VTYV NITDIDDKII+RARQ H           + 
Sbjct: 82  FK-VTYVLNITDIDDKIIKRARQNHLISDYQLKNPDLA 118


>gi|241950257|ref|XP_002417851.1| cysteine-tRNA ligase, putative; cysteinyl-tRNA synthetase, putative
           [Candida dubliniensis CD36]
 gi|223641189|emb|CAX45566.1| cysteine-tRNA ligase, putative [Candida dubliniensis CD36]
          Length = 780

 Score =  294 bits (753), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 114/436 (26%), Positives = 180/436 (41%), Gaps = 88/436 (20%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIF 154
              + S   +++ +D  RL  L P+   R + ++P +I  +  I+ +G+AY+ +   + F
Sbjct: 241 FRKLPSYWEKRYNEDMARLNVLPPSITTRVSEYMPDIIEFVDKIVSNGYAYKTDDGSVYF 300

Query: 155 DTSSI----PNYGSFSRRKIDEQKM----GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
           DT        +Y         +  +       +     K+N +DF LWK S P EP W+S
Sbjct: 301 DTVKYEHSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALWKASKPGEPAWDS 360

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
            WG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N ++
Sbjct: 361 KWGKGRPGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNYFM 420

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           HNG L+++G+KMSKS  NFITI+E L         + A  +RL   +  + +P+DF    
Sbjct: 421 HNGHLHIQGQKMSKSLKNFITIDEALND-------FSARQLRLVFALNAWEKPLDFKDSL 473

Query: 327 LTEAEILLSKW--------------------------------PQTSTSKGIIDPAVLSA 354
           ++E + + S +                                 Q           V  A
Sbjct: 474 ISEVKSIESTFSKFFTNVRALNSDYKHKIENGGYVSRKITGIEKQLFNDLECAQDEVDVA 533

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASAHILGIEVCK 398
             ++L++  AI+ L  L  +S     L                         ILG E   
Sbjct: 534 FNDNLSSGQAIRVLQDLISKSNNYIQLTSTGQTELRIEVLIQVTNWIVKILEILGFEARS 593

Query: 399 EHL----------------NKNISIAIEKLVQERLILLK---MK----KF-SSADYIRKQ 434
           + L                       ++ L Q R  +      K    +F  ++D IR  
Sbjct: 594 DRLGWIDESEQTSTNGTSTEDAALPYVKALAQFRDSVRSLAINKAELNEFLKASDAIRAS 653

Query: 435 LESKGFILEDYKNPDN 450
           L   G  L+D  +  +
Sbjct: 654 LIGLGVSLDDKPDGTS 669



 Score =  133 bits (336), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 40/89 (44%), Positives = 58/89 (65%), Gaps = 1/89 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  ++IYN+L R   EF    P +I  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+
Sbjct: 42  KPTLRIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYF 101

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSI 90
           G   + +V+N+TDIDDKII  ARQ++   
Sbjct: 102 GYN-IKFVQNVTDIDDKIIIAARQQYLFE 129


>gi|156405455|ref|XP_001640747.1| predicted protein [Nematostella vectensis]
 gi|156227883|gb|EDO48684.1| predicted protein [Nematostella vectensis]
          Length = 634

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 114/456 (25%), Positives = 185/456 (40%), Gaps = 83/456 (18%)

Query: 72  ITDIDDKIIE-RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + D  D +      +    +  +   + +T    Q++ KD   L  L        T ++P
Sbjct: 175 LADASDPLSAWLDSKHGSDVTDHRIFAKLTEFWEQEYHKDMAALNVLPADILTNITEYVP 234

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR--------KIDEQKMGTRVPEK 182
           +++  I+ +I +G+AYE+N  + FDT    +    S           +D    G     +
Sbjct: 235 EVVTFIEKVIANGYAYESNGSVYFDTIKFGSSEKHSYARLVPEAVGDLDALAEGEGELSQ 294

Query: 183 Y--HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
               K++  DF LWK S P EP WESPWG+GRPGWH+ECS M+   LG   DI  GG++L
Sbjct: 295 NLGEKRSERDFALWKASKPGEPSWESPWGKGRPGWHVECSVMARDGLGSKIDIPTGGVNL 354

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FP H+NE+AQS     + +  N ++H G L +EG KMSKS  NFITI + L+       
Sbjct: 355 KFPPHDNELAQSEAHFCVSQWVNYFLHAGHLTIEGCKMSKSLKNFITIKQALKRN----- 409

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
              +  IRLA L+  +   +D++   + EAE +   +     +   I             
Sbjct: 410 --SSRQIRLAFLLHTWNATLDYSQNVIREAEQVEKLFNDFFLAVKDILRKPEVKAPGSHN 467

Query: 348 ---------------DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHD 380
                             V  AL + ++T  A++ +  L + S              N  
Sbjct: 468 YHELEKDLQSKFHEKKDGVHQALCDSIDTPGALRHMQDLVKLSNIYISNKKQRNESANKQ 527

Query: 381 LLPIFNA----SAHILGIEVCKE------------HLNKNISIAIEKLVQE-----RLIL 419
           LL            I G    ++               + +++   +L+ +     R I 
Sbjct: 528 LLEGVAKYITQMLKIFGANEGEQLIGFGSAVQQSGGNQEEVALPYVQLLADFREDIRAIA 587

Query: 420 LKMKK---FSSADYIRK-QLESKGFILEDYKNPDNG 451
            + K      + D +R  +L   G +LED +     
Sbjct: 588 REEKVPRILKACDDLRDNKLVDVGVLLEDQEGDQKA 623



 Score =  129 bits (325), Expect = 8e-28,   Method: Composition-based stats.
 Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++K+YN+L R+   F   +   +  Y CGPTVYD +H+G+AR  I FD++ R+L+ Y+  
Sbjct: 17  ELKLYNSLTREKNLFIPSNGRRVTWYSCGPTVYDASHMGHARSYITFDIVRRVLQSYFNY 76

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                V N+TDIDDKII RAR+ H      +
Sbjct: 77  DVFC-VMNVTDIDDKIIHRARRNHLQEKYRE 106


>gi|71893989|ref|YP_279435.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 401

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 128/422 (30%), Positives = 198/422 (46%), Gaps = 35/422 (8%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           ++  N+ +Y+CGPTVY   HIGN R +I+FD ++  L+       + ++ NITDIDDKII
Sbjct: 1   MNKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 58

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+A++      +  + + +T K T ++ K         PT   + T  I ++I  I+ + 
Sbjct: 59  EKAQE------LGISEAELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 112

Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G   Y  NN+++FD   IPNYG  S +KI+              K+  DF+LWK++  
Sbjct: 113 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESL----LDKNTKKTKSKNDFVLWKKTQK 168

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               ++S +G GRPGWH EC+A+   Y   K  D+HGGG+DLIFPHHENE AQ       
Sbjct: 169 G-LFFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTG- 226

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              A  W  +GF+NL G+KM+KS  N +               +   +IR   L  +   
Sbjct: 227 NPIAENWFRSGFVNLNGKKMAKSLNNVLLAKNF-------SHKYNPDIIRSIFLSINPTV 279

Query: 319 PIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           PI+ T + +   + L+ K+ +         K      V   L   L         + L  
Sbjct: 280 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLN--LFIEGKFAKANFLIM 337

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           E  K  +   I     + L     K  L+       ++ ++    L+  K +S AD IR+
Sbjct: 338 ELIKQKENSTIRKIFLN-LRFNFTKMRLDPES----QEKIKNWNKLIMDKNYSEADKIRE 392

Query: 434 QL 435
           +L
Sbjct: 393 EL 394


>gi|315049511|ref|XP_003174130.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311342097|gb|EFR01300.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 804

 Score =  293 bits (751), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 114/422 (27%), Positives = 177/422 (41%), Gaps = 58/422 (13%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T+     DI    ++  +        +   + +T +   +F+KD   L  L P    R 
Sbjct: 210 TTFYDKTQDILYPYLDTLKGSSIPGSDHSIFTRLTREYEDRFMKDVRDLNVLDPDEITRV 269

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRR---------KIDEQKM 175
           T  +P+++  ++ II H   Y   +  + FD  S    G+   R          +  +  
Sbjct: 270 TEFMPEIVSFVERIIDHKFGYVTPDGSVYFDIESFEAAGNNYARLEPWNRNDANLQSEGE 329

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G+   ++  KK+ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH 
Sbjct: 330 GSLSNKQAEKKSSADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHS 389

Query: 236 GGLDLIFPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           GG+DL FPHH+NEIAQS           +  N +IH G L+++G KMSKS  NF TI + 
Sbjct: 390 GGIDLAFPHHDNEIAQSEAYWSPTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDA 449

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
           L+        W    +R+  L+  +R+ I+ T + +        K               
Sbjct: 450 LQRGD-----WTPRSLRIVFLLGGWRDGIEITEEIVKAGNAWEEKVNNFFIRVKDPSVKL 504

Query: 341 --STSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLAREST----------KNHDL 381
             +T    +  A+ +A       L +  NT  A+ A+ +L  +              H +
Sbjct: 505 PETTQDEELPAALKAAQDNVHKHLCDSFNTAGAMYAISELITKFNNTNEAALSAQNTHAV 564

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK--KFSSADYIRKQLESKG 439
                +  +I G+       ++ I    +++ +E       K   F  +  IR  L    
Sbjct: 565 AKWLTSMVNIFGLNSTAGPDSEKIGWYGDEIAEE------AKPYVFPLS-TIRDALRQTA 617

Query: 440 FI 441
             
Sbjct: 618 IA 619



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 41/89 (46%), Positives = 58/89 (65%), Gaps = 3/89 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y
Sbjct: 24  PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPS 89
           + +  + Y+ NITD+DDKII R RQ+H  
Sbjct: 84  F-KFDINYIMNITDVDDKIITRGRQQHLY 111


>gi|302782427|ref|XP_002972987.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
 gi|300159588|gb|EFJ26208.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
          Length = 457

 Score =  293 bits (750), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
                S+  ++F +D   L    P    R T++I +++  ++ II +G+AYE +  + FD
Sbjct: 183 YRAHASRYEKEFFEDMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAYEVDGSVYFD 242

Query: 156 TSSI---PNYGSFSRRKIDEQKMGTRVPEK---YHKKNPADFILWKRSTPMEPGWESPWG 209
           T +      YG  +   +    + +         +KKN  DF LWK S   EP W+SPWG
Sbjct: 243 TEAFNTKHTYGKLNPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVGEPFWDSPWG 302

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAM+S  +G++ DIH GG DL FPHH+NE+AQ+       +  N + H+G
Sbjct: 303 PGRPGWHIECSAMASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQWVNYFFHSG 362

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L++ G KMSKS  NF TI + LE        + +  +RL  L+  + +P+DF+   ++E
Sbjct: 363 HLSVNGLKMSKSLKNFTTIRQALEEL-----HYSSSQLRLLFLLHQWDKPMDFSASAMSE 417

Query: 330 AEILLSKWPQTSTSKGIIDPAV 351
           A     ++         I   V
Sbjct: 418 AAQKEKQFDNLFREVRDIVKEV 439



 Score =  103 bits (256), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +  Y+CGPTVYD +HIG+AR  + FD+L R+L  ++G     YV N+TD+DDKII+RAR+
Sbjct: 23  VTWYICGPTVYDSSHIGHARNYVTFDILRRILEDFFGYDVF-YVMNVTDVDDKIIKRARR 81

Query: 86  EHPSIPINDAISIITS 101
           +H      + +   + 
Sbjct: 82  DHLLKMYLERVKDPSE 97


>gi|115944413|ref|XP_001195853.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 694

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 118/453 (26%), Positives = 177/453 (39%), Gaps = 87/453 (19%)

Query: 72  ITDIDDKIIERARQEHPSIPINDA-ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           +T+  D + E    +      + +  S++      +F  D   L  L      R + ++P
Sbjct: 176 LTEAKDPLAEMLDAQKGCDVSDKSIFSVLPQHWEAEFHSDMNALNVLPADVLTRVSEYVP 235

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGT 177
           ++I  +Q II  G  YE+N  + F TS   N             YG  +     E  +  
Sbjct: 236 EVIDYVQKIIDRGFGYESNGSVYFTTSKFDNDDSHHYAKLVPEAYGDQAALAEGEGDLSI 295

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K++  DF LWK S P EP WESPWG GRPGWHIECSAM+S  LG+  DIH GG
Sbjct: 296 SPDQLQEKQSANDFALWKNSKPGEPEWESPWGMGRPGWHIECSAMASSILGESMDIHTGG 355

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH+NE+AQ+      +     ++H+G L ++G KMSKS  NFITI + LET   
Sbjct: 356 ADLKFPHHDNELAQAEAHYGNDDWVRYFLHSGHLTIQGCKMSKSLKNFITIKQALET--- 412

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI------------------------- 332
               + +  IRL  L+  +++ +D++   +  A                           
Sbjct: 413 ----YSSRQIRLVFLLHSWKDTLDYSTATMECAVQYEKMINEFFLNVKDIIHNSPREGCE 468

Query: 333 LLSKWPQTSTSKG----IIDPAVLSALYNDLNTVSAIQALHKLAREST------------ 376
              KW                 V S L + ++T SA+ A+  +  +              
Sbjct: 469 AFHKWTTLEIRLNKQYLECQEKVHSTLCDSIDTKSALDAIRAVVNQCNVYIQERRGAKDS 528

Query: 377 --------KNHDLLPIFNASAHI-----LGIEVCKEHLNKNISIAI--------EKLVQE 415
                       +  +F     I     LG  V     + N+   +        E     
Sbjct: 529 PNAFLLGSIAKYITKMFKIFGAIEGEELLGFPVGGASESGNVEQTVLPYLKVLAEFRQTI 588

Query: 416 RLILL---KMKKFSSADYIRKQ-LESKGFILED 444
           R         +     D +R + L   G  LED
Sbjct: 589 RQKARILQATEILQLCDALRDEVLPDLGVRLED 621



 Score =  133 bits (336), Expect = 4e-29,   Method: Composition-based stats.
 Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K +++ +N+L R+   F   +   +  Y CGPTVYD AH+G+AR  I FD+L R++  Y+
Sbjct: 23  KAQLRHFNSLTRQKELFVPQEGKRVSWYSCGPTVYDAAHMGHARSYISFDILRRVMTKYF 82

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
               VTYV NITD+DDKII+RAR  +     
Sbjct: 83  -NYDVTYVMNITDVDDKIIKRARTNYLYDQY 112


>gi|46123171|ref|XP_386139.1| hypothetical protein FG05963.1 [Gibberella zeae PH-1]
          Length = 800

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 106/369 (28%), Positives = 158/369 (42%), Gaps = 64/369 (17%)

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +E          + +T    + F  D   L  L P    R T ++PQ+   ++ I+  G 
Sbjct: 198 KETIDTRDQTMFTDLTQSMEKLFTDDMDALNVLRPDVITRVTEYVPQIADFVKTIVDKGF 257

Query: 145 AYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWK 195
           AYEA+  + FD ++    G+   R          + E+  G+       KKNP DF LWK
Sbjct: 258 AYEADGSVYFDITAFEKAGNTYARLRPDNRNDKSLQEEGEGSLSKGLSGKKNPGDFALWK 317

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
           +S   EP W SPWG GRPGWHIECS M+   LG   DIH GG+DL FPHH+NE+AQS   
Sbjct: 318 KSKAGEPFWSSPWGDGRPGWHIECSVMAGAVLGSNMDIHSGGIDLAFPHHDNELAQSEAY 377

Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                       N ++H G L++ G KMSKS  NF TI + L T      ++ +  +R+ 
Sbjct: 378 FCEHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTIQDALAT------TYSSRGMRIV 431

Query: 311 MLMTHYREPIDFTVQ---------------------RLTEA-----EILLSKWPQTSTSK 344
            LM  + + ++ +                        L EA        LS      +S+
Sbjct: 432 FLMGRWNDGVEISPDMRLQADNWESTISNFFINVKALLAEAGITQGVKSLSLSANGKSSE 491

Query: 345 GII------DPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI------FN 386
           G++            A+ N  +T  A+  + KL   +       K+ DL+ +        
Sbjct: 492 GLLGELEQAKQEFEGAMTNSFDTPKAMSVILKLVNTANVHLRDNKDADLVALESIARWIT 551

Query: 387 ASAHILGIE 395
               I G++
Sbjct: 552 KIVGIFGLD 560



 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 5/109 (4%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +K+YN+L+      F  I+   +  Y CGPTVYD +H+G+AR  +  D++ R+L +Y+
Sbjct: 2   ESLKLYNSLKPGAPVPFVPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRILMHYF 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI---NDAISIITSKNTQQF 107
           G   V +V NITDIDDKII +AR++         N +   +       F
Sbjct: 62  G-FEVKFVMNITDIDDKIIIKARRQRLLELEKNKNYSKDELRDLALAAF 109


>gi|3242657|dbj|BAA29032.1| cysteinyl-tRNA synthetase [Mus musculus]
          Length = 486

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 98/331 (29%), Positives = 147/331 (44%), Gaps = 48/331 (14%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD      L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 158 GSEVTDNSIFSKLPKFWEEEFHKDMEAPNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 217

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 218 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 277

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 278 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 337

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                +     ++H G L + G KMSKS  NFITI + L       +   A  +RLA LM
Sbjct: 338 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 390

Query: 314 THYREPIDFTVQRLTEAEI------------------------LLSKWPQTSTSKGII-- 347
             +++ +D++   +  A                             KW            
Sbjct: 391 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 450

Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST 376
               AV  AL ++++T + ++ +  L  +  
Sbjct: 451 GKKTAVHEALCDNIDTRTVMEEMRALVSQCN 481



 Score =  105 bits (263), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/73 (50%), Positives = 47/73 (64%), Gaps = 1/73 (1%)

Query: 22 DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
          D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +  V Y  NITDIDDKII 
Sbjct: 1  DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-QYDVFYCMNITDIDDKIIR 59

Query: 82 RARQEHPSIPIND 94
          RARQ +      +
Sbjct: 60 RARQNYLFEQYRE 72


>gi|71014778|ref|XP_758760.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
 gi|46098550|gb|EAK83783.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
          Length = 824

 Score =  293 bits (750), Expect = 5e-77,   Method: Composition-based stats.
 Identities = 113/452 (25%), Positives = 175/452 (38%), Gaps = 109/452 (24%)

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-----EANNEIIF 154
            +    ++  D  RL    PT   R + ++P+++  +Q II  G AY     +    + F
Sbjct: 270 AAYWEAEYFNDMKRLHVEPPTTLTRVSEYVPEIVTFVQQIIDRGFAYAEGVDQNKKNVWF 329

Query: 155 DTSSI-----------PNYGSF-----SRRKIDEQKMGT---RVPEKYHKKNPADFILWK 195
           DT +             +Y          R++ E+  G+          K+  +DF LWK
Sbjct: 330 DTRAFDGAKSQDGSFQHSYAKLQPWSKGNRELLEEGEGSLSTSTAATAGKRAASDFALWK 389

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
            S P EP W SPWG GRPGWHIECS M S  LG+  DIH GG+DL+FPHH+NEIAQS   
Sbjct: 390 SSKPGEPAWPSPWGPGRPGWHIECSVMGSAVLGETMDIHSGGVDLMFPHHDNEIAQSEAH 449

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
               +  N ++H G L++EG KMSKS  NFI+I+E LE        + A  +R++ L+  
Sbjct: 450 HGCRQWVNYFLHTGHLHIEGLKMSKSLKNFISIDEALER-------FTARQLRMSFLLQP 502

Query: 316 YREPIDFTVQRL---TEAEILLSKW-----------------------------PQTSTS 343
           +   +DF    L     AE   + +                                  S
Sbjct: 503 WHGRMDFKQSALGEVKNAESAFNNFFVSVKAKVAQAKALGDAYSDGQHHYGAAERSLVDS 562

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------FNAS 388
                 A   A+ +  +T   ++ L  L  ++      L                     
Sbjct: 563 LEEAQHAFRLAMCDSFDTPKGMEILLDLVSKANIYEKSLEKRADVNVGVLTAVARYVGDM 622

Query: 389 AHILGI--------------EVCKEHLNKNISIAIEKLV------------QERLILLK- 421
             +LG+               V  E  + + ++  E+L+              R +    
Sbjct: 623 LKMLGLGEGAALSASQEIGWGVADESGDVSAAVNKEELLMPYLRALSNFRDAVRNLARSS 682

Query: 422 --MKKF-SSADYIRK-QLESKGFILEDYKNPD 449
               ++   +D +R   L   G  LED ++  
Sbjct: 683 APASEYLKLSDALRDNDLVDLGISLEDTEDGQ 714



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 43/121 (35%), Positives = 64/121 (52%), Gaps = 9/121 (7%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++K+YN+L R  T F       +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y 
Sbjct: 37  EPELKMYNSLTRTKTPFVPKKGRTVTWYNCGPTVYDASHMGHARNYVTQDIIRRILRDYL 96

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT--------SKNTQQFVKDTTR 113
           G   V +V NITD+DDKII +AR  +         + +T           +  FVK+  R
Sbjct: 97  GYD-VHFVMNITDVDDKIIIKARHSYLLKQFRSQHAQLTKPLLATVQEAWSAYFVKNLER 155

Query: 114 L 114
            
Sbjct: 156 F 156


>gi|116203083|ref|XP_001227353.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
 gi|88177944|gb|EAQ85412.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
          Length = 794

 Score =  292 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 111/416 (26%), Positives = 168/416 (40%), Gaps = 74/416 (17%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+GN       D   + L+   G      V          ++   +E          + +
Sbjct: 157 HLGNM------DAAAKSLKDSSGFDGAEEVLL------PYLDSLYKETIDTSDQTMFTDL 204

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI 159
           T    + F  D   L  L P    R T ++PQ++  ++ II  G AYEAN  + FD ++ 
Sbjct: 205 TQAMEKAFSDDMEALNVLPPDAVTRVTEYVPQIVSFVEQIIAKGFAYEANGSVYFDIAAF 264

Query: 160 PNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
              G+   R          + E+  G+       KK   DF LWK+S P EP W SPWG 
Sbjct: 265 EQAGNTYARLRPESKNDKALQEEGEGSLSKSLEGKKRSGDFALWKKSKPGEPFWPSPWGA 324

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD-----RIEKTANIW 265
           GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS               N +
Sbjct: 325 GRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAYFHQYERGEHSWVNYF 384

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G L++ G KMSKS  NF TI + L T      ++ A  +R+  LM  + + ++ +  
Sbjct: 385 LHMGHLSIAGSKMSKSLKNFQTIQDALAT------TYTARNMRIVFLMGRWNDGVEISGD 438

Query: 326 RLTEAE-----------------------------ILLSKWPQTSTSKGIIDPAVLSALY 356
              +A+                               L +    +         + SAL 
Sbjct: 439 MRKQADSWESTIDNFFTNVKAKLAEAGSTADGIKGRSLEEATSLTEELEQAKKDLDSALR 498

Query: 357 NDLNTVSAIQALHKLAREST-------------KNHDLLPIFNASAHILGIEVCKE 399
           N  +T  A+Q + +L + +                  +         ILG++   +
Sbjct: 499 NSFDTPGAMQVILRLVKNANIYMNDKSAQPNLQAIEAVARWVTKIVGILGLDASAQ 554



 Score = 93.8 bits (232), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 11/106 (10%)

Query: 5   IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           I ++N+L+      F   +   +  Y CGPT YD +H+G+AR  +  D++ R+L +++G 
Sbjct: 4   ITVHNSLKPGSPVPFVPREEGKVSWYACGPTTYDLSHLGHARNYVSTDIIRRILIHHFGL 63

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
             V +V         II +AR++       +     +      F  
Sbjct: 64  N-VNFV---------IIIKARRKRLLELEKEKPYSPSHIRELAFKA 99


>gi|190347294|gb|EDK39538.2| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 769

 Score =  292 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 96/469 (20%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T++ +I D+    ++  ++   ++        + S    +F +D  RL  L PT+  R 
Sbjct: 203 PTFLESIRDVAMPALD--KEYGSTVNDPSIFKKLPSYWEGKFNEDMARLNVLPPTYTTRV 260

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI-----PNYGSFSRRKIDEQ-----K 174
           + +IP+++  ++ II +G AY   +  + FDT+        +Y         +       
Sbjct: 261 SEYIPEIMAFVEKIISNGFAYPTKDGSVYFDTAKFENDPKHDYAKLQPWNKGDMSLINDG 320

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G+    +  KKNPADF LWK S P EP W+S WG GRPGWHIECS M+S   G+  DIH
Sbjct: 321 EGSLSLGQESKKNPADFALWKASKPGEPAWDSKWGPGRPGWHIECSVMASDITGETMDIH 380

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+DL FPHH+NE+AQS      E+  N ++HNG L+++G+KMSKS  NFITI + L  
Sbjct: 381 SGGIDLCFPHHDNELAQSEAYFNNEQWVNYFMHNGHLHIQGQKMSKSLKNFITIEQALND 440

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE---AEILLSKW-------------- 337
                  + +  +RL   M+ +  P+DF    + E    E  +SK+              
Sbjct: 441 -------FTSRQMRLVFAMSAWDRPLDFKDSLIKEIKAYESTMSKFFTNVRAFYRDHRDL 493

Query: 338 ---------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------ 376
                           Q           V +A  ++L++  A++ L  L  ++       
Sbjct: 494 ISNGELPPTKLGEEEKQLHKDLKKAQDDVHNAFCDNLSSHVALRVLSDLVSKTNNYIQSR 553

Query: 377 -------KNHDLLPIFNASAHILGIEVCK-------------------EHLNKNISIAIE 410
                  +   LL + N +  IL I   K                     + +     ++
Sbjct: 554 SADASKLRIESLLAVTNWTVRILSILGFKTRPDGLGWSDDSSETSSGAGSVEELAMPYVK 613

Query: 411 KLVQERLILLK---MKKFSSADYI-------RKQLESKGFILEDYKNPD 449
            L Q R  +      K  +SAD I       R +L + G  L+D  N  
Sbjct: 614 ALSQFRDSVRTLAIDK--ASADRILSECDGVRGKLINLGVSLDDRPNGG 660



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + IYN+L R  TEF  + P+++  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G 
Sbjct: 33  PLMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHSHMGHARNYVSTDISRRILQDYFGY 92

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIP 91
             VT+V+N+TDIDDKII  ARQE+    
Sbjct: 93  N-VTFVQNVTDIDDKIIVAARQEYLFEQ 119


>gi|302805410|ref|XP_002984456.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
 gi|300147844|gb|EFJ14506.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
          Length = 450

 Score =  292 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 90/262 (34%), Positives = 137/262 (52%), Gaps = 11/262 (4%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
                S+  ++F +D   L    P    R T++I +++  ++ II +G+AYE +  + FD
Sbjct: 176 YRAHASRYEKEFFEDMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAYEVDGSVYFD 235

Query: 156 TSSI---PNYGSFSRRKIDEQKMGTRVPEK---YHKKNPADFILWKRSTPMEPGWESPWG 209
           T +      YG  +   +    + +         +KKN  DF LWK S   EP W+SPWG
Sbjct: 236 TEAFNTKHTYGKLNPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVGEPFWDSPWG 295

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            GRPGWHIECSAM+S  +G++ DIH GG DL FPHH+NE+AQ+       +  N + H+G
Sbjct: 296 PGRPGWHIECSAMASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQWVNYFFHSG 355

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            L++ G KMSKS  NF TI + LE        + +  +RL  L+  + +P+DF+   ++E
Sbjct: 356 HLSVNGLKMSKSLKNFTTIRQALEEL-----HYSSSQLRLLFLLHQWDKPMDFSASAMSE 410

Query: 330 AEILLSKWPQTSTSKGIIDPAV 351
           A     ++         I   V
Sbjct: 411 AAQKEKQFDNLFREVRDIVKEV 432



 Score =  103 bits (256), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 1/76 (1%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +  Y+CGPTVYD +HIG+AR  + FD+L R+L  ++G     YV N+TD+DDKII+RAR+
Sbjct: 16  VTWYICGPTVYDSSHIGHARNYVTFDILRRILEDFFGYDVF-YVMNVTDVDDKIIKRARR 74

Query: 86  EHPSIPINDAISIITS 101
           +H      + +   + 
Sbjct: 75  DHLLRMYLERVKDPSE 90


>gi|296817003|ref|XP_002848838.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238839291|gb|EEQ28953.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 804

 Score =  292 bits (749), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 110/394 (27%), Positives = 173/394 (43%), Gaps = 49/394 (12%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T+     DI    ++  +        +   +++T +   +F++D   L  L P    R 
Sbjct: 210 ATFYNKTQDILYPYLDTLKGSSIQGSDHSIFTLLTKEYEDRFMQDVRDLNVLDPDEITRV 269

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRR---------KIDEQKM 175
           T  +P+++  ++ II H   Y   +  + FD  S    G+   R          +  +  
Sbjct: 270 TEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIESFEAAGNSYARLEPWNRNDANLQSEGE 329

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
           G    ++  KK+ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH 
Sbjct: 330 GALSNKQAEKKSAADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASARLGKQMDIHS 389

Query: 236 GGLDLIFPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           GG+DL FPHH+NEIAQS           +  N +IH G L+++G KMSKS  NF TI + 
Sbjct: 390 GGIDLAFPHHDNEIAQSEAYWSPTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDA 449

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
           L+        W    +R+  L+  +R+ I+ T + +        K               
Sbjct: 450 LQRGD-----WTPRSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRVKDPSIKL 504

Query: 341 --STSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTKNHD----------L 381
             +TS   +  A+ SA       L +  NT  A+ A+ +L  +    ++          +
Sbjct: 505 PETTSDEELAAALKSAQDSVHKHLCDSFNTAGAMYAISELITKFNNTNETALSVQNTQAV 564

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
                +  +I G+       ++NI    +++  E
Sbjct: 565 AKWLTSMVNIFGLNSTAGPDSENIGWYGDEITAE 598



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y
Sbjct: 24  PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           + +  V Y+ NITD+DDKII R RQ+H     
Sbjct: 84  F-KFDVNYIMNITDVDDKIITRGRQQHLYRQF 114


>gi|110757574|ref|XP_394641.3| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Apis
           mellifera]
          Length = 729

 Score =  292 bits (748), Expect = 7e-77,   Method: Composition-based stats.
 Identities = 123/440 (27%), Positives = 183/440 (41%), Gaps = 82/440 (18%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            +++   +  +   + ++    Q+F KD   L  L P    R + +IP++I  I+ II +
Sbjct: 189 DKEKGAMVTEHSIFTKLSQYWEQEFHKDMDSLNVLRPNVLTRVSEYIPEIIEFIKKIIEN 248

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKI-----------DEQKMGTRVPEKYHKKNPADF 191
           G AYE+N  + FD S+          K+            E +      E   K++P DF
Sbjct: 249 GIAYESNGSVYFDVSTFNKQDKHYYAKLVPEAYGDTLSLQEGEGDLSTLEISEKRSPIDF 308

Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
            LWK S   EP WESPWG+GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NEIAQ
Sbjct: 309 ALWKCSKEGEPWWESPWGKGRPGWHIECSVMASIICGESLDIHTGGVDLKFPHHDNEIAQ 368

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +            ++H+G L + G KMSKS  NFITI + L       + + A  +RLA 
Sbjct: 369 AEAYFNNSNWVRYFLHSGHLTISGCKMSKSLKNFITIQDAL-------KKYSARQLRLAF 421

Query: 312 LMTHYREPIDFTVQRLTEA---EILLS-----------------------KWPQTSTSKG 345
           L+  +++ +D++   +  A   E  L+                       KW        
Sbjct: 422 LLHSWKDTLDYSDNTMHMAIQYEKFLNEFFLNVKCKIRSLGSETNINTFIKWTNFEIELN 481

Query: 346 I----IDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
                    V +AL ++++T SA+ A+  L                    D+        
Sbjct: 482 EKFYNARDFVHNALCDNIDTRSALDAIRDLVTHCNIYMKEIKQPNTLLLRDVAVYITKMF 541

Query: 390 HILG-IEVCKEHLNKNISIAIEKL-VQE----------------RLILLKMKK---FSSA 428
            I G I    + +   I   I KL V++                R     +K        
Sbjct: 542 TIFGTISYSHDAIGFPIDSNIVKLNVEQAVMPYLEILANFREKVRNHAKTLKASTILEEC 601

Query: 429 DYIRKQ-LESKGFILEDYKN 447
           D +R   L + G  LED  N
Sbjct: 602 DTLRDDILPNIGVRLEDSNN 621



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/95 (43%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+L R    F     ++I  Y CGPTVYD +H+G+AR  + FD++ R+L  Y+G  
Sbjct: 20  LKLYNSLTRNKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYMSFDIIRRVLSDYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
            + YV NITDIDDKII+RARQ +           +
Sbjct: 80  -ILYVMNITDIDDKIIKRARQNYLYEKYIKENHTL 113


>gi|242792877|ref|XP_002482046.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218718634|gb|EED18054.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 828

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 120/436 (27%), Positives = 182/436 (41%), Gaps = 61/436 (13%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+     DI    +++          +   + +T K   +F+KD   L  L P    R T
Sbjct: 238 TFYTEAQDIFLPYLDQLEGSTIDADDHSIFTKLTKKYEGRFMKDLRDLNVLDPDELTRVT 297

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG---------SFSRRKIDEQKMG 176
            + PQ+   ++ I+ +  AY  ++  + FD  +    G         S S  K+  +  G
Sbjct: 298 EYGPQIAQFVERIVENKFAYVTSDGSVYFDIKAFEEAGFPYARLEPWSKSDGKLIAEGEG 357

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           T   +   K + +DF LWK S P EP W S WG+GRPGWHIECSAM+S  LGK  DIH G
Sbjct: 358 TLTSKTTEKHSLSDFALWKASKPGEPSWSSQWGKGRPGWHIECSAMASDRLGKTIDIHSG 417

Query: 237 GLDLIFPHHENEIAQSCCA---DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           G+DL FPHH+NE+AQS         ++  N ++H G L+++G KMSKS  NF TI E LE
Sbjct: 418 GIDLAFPHHDNELAQSEAYWNTHTHDQWINYFLHMGHLSIQGSKMSKSLKNFTTIREALE 477

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
            K +  RS     +R+  L+ H+   I+ T   +        K          +D     
Sbjct: 478 RKDWTSRS-----LRIVFLLGHWNGGIEITEDLVNTGNAWEDKLNNFFLKMKELDILKKS 532

Query: 349 ----------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------- 382
                             V   L +  NT +A+ A+  L  +                  
Sbjct: 533 SSGTDQSLGEALESTKALVNEHLSDSFNTPAAMAAISDLVTKFNSVDKATVNPEHVEQMG 592

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKF-----SSADYIRKQ-LE 436
               +  +I G+          I  +   + +E       K +     +  D +R++ L 
Sbjct: 593 KWVTSIVNIFGLNGSASPDTTEIGWSGIDVPEE------AKPYLYPLSALRDSLREKALS 646

Query: 437 SKGFILEDYKNPDNGQ 452
            +G  +ED KN    Q
Sbjct: 647 KEGISVEDIKNIIGSQ 662



 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 3/99 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L +    F  IDP+   +  Y CGPTVYD +H+G+AR  +  D++ R+LR Y
Sbjct: 52  PTLKIYNSLTKSKVPFVPIDPNGRKVTWYACGPTVYDDSHLGHARNYVTTDIIRRILRDY 111

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           + +  V +V NITD+DDKII R RQ++       A   I
Sbjct: 112 F-KFDVHFVMNITDVDDKIILRGRQQYLFNKFVSAHPTI 149


>gi|146416571|ref|XP_001484255.1| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 769

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 127/469 (27%), Positives = 200/469 (42%), Gaps = 96/469 (20%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T++ +I D+    ++  ++   ++        + S    +F +D  RL  L PT+  R 
Sbjct: 203 PTFLESIRDVAMPALD--KEYGSTVNDPSIFKKLPSYWEGKFNEDMARLNVLPPTYTTRV 260

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI-----PNYGSFSRRKIDEQ-----K 174
           + +IP+++  ++ II +G AY   +  + FDT+        +Y         +       
Sbjct: 261 SEYIPEIMAFVEKIISNGFAYPTKDGSVYFDTAKFENDPKHDYAKLQPWNKGDMSLINDG 320

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G+    +  KKNPADF LWK S P EP W+S WG GRPGWHIECS M+S   G+  DIH
Sbjct: 321 EGSLSLGQESKKNPADFALWKASKPGEPAWDSKWGPGRPGWHIECSVMASDITGETMDIH 380

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            GG+DL FPHH+NE+AQS      E+  N ++HNG L+++G+KMSKS  NFITI + L  
Sbjct: 381 SGGIDLCFPHHDNELAQSEAYFNNEQWVNYFMHNGHLHIQGQKMSKSLKNFITIEQALND 440

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE---AEILLSKW-------------- 337
                  + +  +RL   M+ +  P+DF    + E    E  +SK+              
Sbjct: 441 -------FTSRQMRLVFAMSAWDRPLDFKDSLIKEIKAYESTMSKFFTNVRAFYRDHRDL 493

Query: 338 ---------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------ 376
                           Q           V +A  ++L++  A++ L  L  ++       
Sbjct: 494 ISNGELPPTKLGEEEKQLHKDLKKAQDDVHNAFCDNLSSHVALRVLLDLVSKTNNYIQLR 553

Query: 377 -------KNHDLLPIFNASAHILGIEVCK-------------------EHLNKNISIAIE 410
                  +   LL + N +  IL I   K                     + +     ++
Sbjct: 554 SADASKLRIESLLAVTNWTVRILSILGFKTRPDGLGWSDDSSETSSGAGSVEELAMPYVK 613

Query: 411 KLVQERLILLK---MKKFSSADYI-------RKQLESKGFILEDYKNPD 449
            L Q R  +      K  +SAD I       R +L + G  L+D  N  
Sbjct: 614 ALSQFRDSVRTLAIDK--ASADRILSECDGVRGKLINLGVSLDDRPNGG 660



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 1/88 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            + IYN+L R  TEF  + P+++  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G 
Sbjct: 33  PLMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHSHMGHARNYVSTDISRRILQDYFGY 92

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIP 91
             VT+V+N+TDIDDKII  ARQE+    
Sbjct: 93  N-VTFVQNVTDIDDKIIVAARQEYLFEQ 119


>gi|302309006|ref|NP_986187.2| AFR640Wp [Ashbya gossypii ATCC 10895]
 gi|299790899|gb|AAS54011.2| AFR640Wp [Ashbya gossypii ATCC 10895]
          Length = 750

 Score =  292 bits (748), Expect = 8e-77,   Method: Composition-based stats.
 Identities = 122/472 (25%), Positives = 201/472 (42%), Gaps = 76/472 (16%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           NA+  +    + R L          ++  + D+   +++   +   S+   D    + + 
Sbjct: 176 NAKFAMHTAAVGRALDALENPTVPGFLTAVKDVLVPLLDG--RSGASVRDPDVFRALAAH 233

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
               F  D  RL    P+   R + ++ +++  I+ I+ +G+AY  ++  + FDT     
Sbjct: 234 WENSFNADMERLGVRPPSVTTRVSEYVDEIVKFIERIVANGYAYATSDGSVYFDTVQFEA 293

Query: 162 YGSFS------RRKIDEQKMGTR--VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
            G          R + +        +     K+NP DF LWK S   EP W SPWG GRP
Sbjct: 294 GGHAYPKCQPWNRGVADLIADGEGALATGTEKQNPNDFALWKASKAGEPEWPSPWGLGRP 353

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQ+      ++  N ++H G L++
Sbjct: 354 GWHIECSVMASDVLGERVDIHSGGIDLAFPHHDNELAQAEACFNSQQWVNYFLHTGHLHI 413

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE---A 330
           EG+KMSKS  NFITI+E L+        + A  +RLA  M+ +  P+DF    + +    
Sbjct: 414 EGQKMSKSLKNFITIDEALKM-------YSARQLRLAFAMSPWGSPLDFKEATMVQVRGW 466

Query: 331 EILLSKWPQTSTS-----KGIIDPAVLSA----------------LYNDLNTVSAIQALH 369
           E  +  + +T  +      G   P V  A                L ++L+T S ++ L 
Sbjct: 467 ESAMGNFFRTVRALANDGDGKTRPGVREAELRAHLADAAARVHENLCDNLSTHSVLRCLG 526

Query: 370 KLAREST----------KNHDLLPIFNASAHIL---GIEVCKEHLN-------------K 403
           +L   +           +   +  +      IL   GI    + L               
Sbjct: 527 ELVGRANAYIGAAGPEARVESVAAVARFCTRILAAMGIPARADGLGWLEQQAGAAEAGEA 586

Query: 404 NISIAIEKLVQERLILLK-------MKKFSSADYIRK-QLESKGFILEDYKN 447
            I   +  L + R  + K        +  +  D +R   L + G +LED ++
Sbjct: 587 AILPYVRCLARFRDEVRKGARGGDTARLLAITDRVRDVDLPALGVLLEDRQD 638



 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +  +K+YN+L R   EF  +     +  Y CGPTVYD +H+G+AR  +  D+  RL+  Y
Sbjct: 33  QPVLKLYNSLTRTKDEFIPLSQGRNVTWYSCGPTVYDASHMGHARNYVSIDINRRLIEDY 92

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           +G   V +V+N+TDIDDKII RARQEH       A   +
Sbjct: 93  FG-YHVEFVQNVTDIDDKIILRARQEHLYAEYVAAHPSV 130


>gi|50304753|ref|XP_452332.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49641465|emb|CAH01183.1| KLLA0C03025p [Kluyveromyces lactis]
          Length = 766

 Score =  292 bits (748), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 117/434 (26%), Positives = 189/434 (43%), Gaps = 90/434 (20%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
           D    + +   Q++ +D   L  L PT   R + ++P+++  ++ II +G+AY  ++  +
Sbjct: 230 DIFRKLPAYWEQRYDQDMAALNVLPPTVTTRVSEYVPEIVQFVETIISNGYAYATSDGSV 289

Query: 153 IFDTSSI-----PNYGS---FSRRKIDEQKMG----TRVPEKYHKKNPADFILWKRSTPM 200
            FDT+         Y     +++ ++D  + G    +    K  K++  DF LWK S P 
Sbjct: 290 YFDTAKFDSSEGHEYAKCQPWNKGQLDLIQDGEGSLSDFSAKNGKRSANDFALWKASKPG 349

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           EP W SPWG+GRPGWHIECS M+S   G V DIH GG+DL FPHH+NE+AQS       +
Sbjct: 350 EPEWPSPWGKGRPGWHIECSVMASDIHGSVIDIHTGGIDLAFPHHDNELAQSEACYDNHQ 409

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
             N ++H G L++EG+KMSKS  NFITI E L         + A  +RLA     +   +
Sbjct: 410 WINYFLHTGHLHIEGQKMSKSLKNFITIEEALN-------KYSARQLRLAFASVQWNNQL 462

Query: 321 DFTVQRLTEAE-------------ILLSKWPQTSTSKGII-------------------D 348
           DF    L E +               L+   + S   G I                    
Sbjct: 463 DFKDSLLNEVKSLESSFTNFFKNIRALNNDYKHSLGLGKIVSKKLSNEEKALLNVLKSTQ 522

Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHIL------ 392
             V ++  ++L+T   ++ L++L  +S           K   LL I    + IL      
Sbjct: 523 EKVHASFCDNLSTPQVLKHLNELLTKSNSYIANISSELKIEPLLAITRYISKILGVIGFQ 582

Query: 393 ----GIEVCKEHLNKNISIAIEKLVQE---------RLILLK---MK----KFSSA-DYI 431
               G+    +  + +     ++ +           R  + +    K    +F  A D +
Sbjct: 583 LRSDGLGWLDDSSSDSSPDVSKEDIALPYVRCLSYFRDEVRQLAMNKAPSSQFLQATDRL 642

Query: 432 RK-QLESKGFILED 444
           R  +L +    ++D
Sbjct: 643 RDEELVALNVAVDD 656



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YNTL R   EF     S  +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G 
Sbjct: 41  LKLYNTLTRNKEEFVTHSNSKCVTWYSCGPTVYDASHMGHARNYVSIDINRRILQDYFGY 100

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI------NDAISIITSKNTQQFVKDTTRLA 115
             + +V+N+TDIDDKII RARQ                   +       F      L 
Sbjct: 101 D-INFVQNVTDIDDKIIIRARQNFLFEEYVKRNDNKVTEDTVEEVKISLFEFVEKNLN 157


>gi|315055169|ref|XP_003176959.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338805|gb|EFQ98007.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 818

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 99/358 (27%), Positives = 152/358 (42%), Gaps = 50/358 (13%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIF 154
              +T     +F++D   L  L P    + T HI ++I  ++ II +G AY   +  + F
Sbjct: 252 FEALTKNYESRFLEDMRCLNVLEPDKLTKVTTHISEIIQFVKTIIGNGFAYSTPDGSVYF 311

Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           + +     G +           + +     G+       K +  DF+LWK S P EP W 
Sbjct: 312 NINKFEESGHYYAKLEPWNRHNKHLQRDGEGSLSKGATSKLSRNDFVLWKASRPGEPSWP 371

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG GRPGWHIECSAM+S   G   DIH GG+DL FPHH+NE+AQS       +  N +
Sbjct: 372 SPWGNGRPGWHIECSAMASANFGSQMDIHSGGIDLAFPHHDNELAQSEAFWGGTQWVNYF 431

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G L+++G KMSKS  NF TI E L+   +  R+     +R+  L++ +RE I+ T  
Sbjct: 432 LHMGHLSIQGSKMSKSLKNFTTIREALDRGTWTSRN-----LRIVFLLSGWREGIEITTD 486

Query: 326 RLTEAEILLSKW-------------------------PQTSTSKGIIDPAVLSALYNDLN 360
            +  +     K                              T        V +AL N  +
Sbjct: 487 MVDASRAWEEKLNNFFLKSRNFKALHKLASEAPNNRCDALETHLKFAQDKVFNALCNSFD 546

Query: 361 TVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKEHLNKNISIA 408
           T +A+ A+ +L                  +      +  ++ G+       +  I  A
Sbjct: 547 TPTAMSAITELVTVFNSAEPPKLNNVILQNAAKWITSMVNVFGLNGDASPEDPEIGWA 604



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/99 (41%), Positives = 61/99 (61%), Gaps = 3/99 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             ++++N+L R  T F   DP+   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 22  PPLRVWNSLTRSKTHFVPADPNGQKVTWYACGPTVYDDAHLGHARNYVTTDILRRIMRDY 81

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           + +  V ++ NITD+D+KII RARQ+H      D    I
Sbjct: 82  F-KFDVNFIMNITDVDNKIIIRARQQHLFAEYKDKHPDI 119


>gi|302657026|ref|XP_003020246.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
 gi|291184058|gb|EFE39628.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
          Length = 804

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 109/395 (27%), Positives = 175/395 (44%), Gaps = 51/395 (12%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T+     DI    ++  +        +   + +T +   +F++D   L  L P    R 
Sbjct: 210 ATFYDKTQDILYPYLDTLKGASIQGSDHSIFTRLTKEYEDRFMQDVRDLNVLDPDEITRV 269

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDE----------QK 174
           T  +P+++  ++ II H   Y   +  + FD  +    G+ S  +++           + 
Sbjct: 270 TEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIENFEAAGN-SYARLEPWNRNDANRQSEG 328

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G+   ++  KK+ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH
Sbjct: 329 EGSLSNKQAEKKSSADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIH 388

Query: 235 GGGLDLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            GG+DL FPHH+NEIAQS           +  N +IH G L+++G KMSKS  NF TI +
Sbjct: 389 SGGIDLAFPHHDNEIAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRD 448

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
            L+        W    +R+  L+  +R+ I+ T + +        K              
Sbjct: 449 ALQRGD-----WTPRSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVK 503

Query: 341 ---STSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLAREST----------KNHD 380
              +TS   +  A+ +A       L +  NT  A+ A+ +L  +              H 
Sbjct: 504 LPETTSDEELPAALKAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTSEAALSAQNTHA 563

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           +     +  +I G+       ++NI    +++ +E
Sbjct: 564 VAKWLTSMVNIFGLNSTAGPDSENIGWHGDEIAEE 598



 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y
Sbjct: 24  PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           + +  V Y+ NITD+DDKII R RQ+H     
Sbjct: 84  F-KFDVKYIMNITDVDDKIITRGRQQHLYNQF 114


>gi|320585786|gb|EFW98465.1| cysteinyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 916

 Score =  291 bits (745), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 107/369 (28%), Positives = 159/369 (43%), Gaps = 60/369 (16%)

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +E          + +T    + F  D   L  L P    R T ++PQ++   + II  G 
Sbjct: 209 KETIDTSDQTMFTDLTQAMEKAFTDDMDALNVLRPDAVTRVTEYVPQIVAFTKGIIDKGF 268

Query: 145 AYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWK 195
           AYEAN  + FD  +    G+   R          + E+  G+       K+   DF LWK
Sbjct: 269 AYEANGSVYFDIEAFERAGNTYARLRPESKNDKALQEEGEGSLSKSLAGKRRAGDFALWK 328

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
           RS P EP W SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS   
Sbjct: 329 RSKPGEPFWASPWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAF 388

Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                         ++H G L++ G KMSKS  NF TI + LET       + A  +R+ 
Sbjct: 389 FHRPGAGEHSWVRYFLHMGHLSIAGSKMSKSLKNFQTIQDALET------GYTARSMRIV 442

Query: 311 MLMTHYREPIDFTVQRLTEA---EILLS--------KWPQTST----------------- 342
            +++ + + ++ +     +A   E  L         +  +T T                 
Sbjct: 443 FMLSRWNDGLEVSPDMRKQASSWENTLDNFFTNIKARLAETRTGTMTSKVQSLSLQDGLT 502

Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASAH------- 390
                    + +AL N  +T  A+Q + ++ R +     +    L    A AH       
Sbjct: 503 AELEQAQQDLDAALRNSFDTPGAMQVILRVVRSANVAMSEAGADLGPVEAVAHWVTKVVG 562

Query: 391 ILGIEVCKE 399
           I G++   +
Sbjct: 563 IFGLDANAQ 571



 Score =  112 bits (281), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 2/103 (1%)

Query: 2   KKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +  I ++N+L+      F+      +  Y CGPTVYD +H+G+AR  +  DV+ R+LR Y
Sbjct: 9   RAGIAVHNSLKPGTPVHFEPKQEDTVTWYSCGPTVYDLSHMGHARNYVSTDVIRRILRDY 68

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           +G K V ++ NITD+DDKII +AR++       +       ++
Sbjct: 69  FGYK-VQFIMNITDVDDKIIIKARRKRLLDLEREKTYTAEQRH 110


>gi|302506132|ref|XP_003015023.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
 gi|291178594|gb|EFE34383.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
          Length = 844

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 109/395 (27%), Positives = 175/395 (44%), Gaps = 51/395 (12%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T+     DI    ++  +        +   + +T++   +F++D   L  L P    R 
Sbjct: 250 ATFYDKTQDILYPYLDTLKGASIQGSDHSIFTRLTTEYENRFMQDVRDLNVLDPDEITRV 309

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDE----------QK 174
           T  +P+++  ++ II H   Y   +  + FD  +    G+ S  +++           + 
Sbjct: 310 TEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIENFEAAGN-SYARLEPWNRNDANRQSEG 368

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G+   ++  KK+ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH
Sbjct: 369 EGSLSNKQAEKKSSADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIH 428

Query: 235 GGGLDLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            GG+DL FPHH+NEIAQS           +  N +IH G L+++G KMSKS  NF TI +
Sbjct: 429 SGGIDLAFPHHDNEIAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRD 488

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
            L         W    +R+  L+  +R+ I+ T + +        K              
Sbjct: 489 ALRRGD-----WTPRSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVK 543

Query: 341 ---STSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLAREST----------KNHD 380
              +TS   +  A+ +A       L +  NT  A+ A+ +L  +              H 
Sbjct: 544 LPETTSDEELPAALKAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTSEAALSAQNTHA 603

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           +     +  +I G+       ++NI    +++ +E
Sbjct: 604 VAKWLTSMVNIFGLNSTAGPDSENIGWYGDEIAEE 638



 Score =  129 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y
Sbjct: 64  PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDY 123

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           + +  V Y+ NITD+DDKII R RQ+H     
Sbjct: 124 F-KFDVKYIMNITDVDDKIITRGRQQHLYNQF 154


>gi|168027561|ref|XP_001766298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682512|gb|EDQ68930.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 736

 Score =  290 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 96/315 (30%), Positives = 141/315 (44%), Gaps = 40/315 (12%)

Query: 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-- 159
               +F  D + L C  P    R T ++ +++  ++ I+ +  AY AN  + FDT +   
Sbjct: 190 MYENEFWDDMSALGCGYPDVLVRVTEYMDKIVEYVEVIVANKFAYVANESVYFDTRAFRE 249

Query: 160 --PNYGSFSRRKIDEQKMGTRVP---EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
               YG  +   +    + +      +   K+   DF LWK+S P EP W+SPWG GRPG
Sbjct: 250 AGHRYGKLNPAAVGSSMLASESESNFDTSEKRTSCDFALWKKSKPGEPSWDSPWGPGRPG 309

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           WHIECSAM+S  LG   DIH GG DL FPHH+NE+AQS       +    + H+G L+++
Sbjct: 310 WHIECSAMASDILGDSIDIHTGGHDLQFPHHDNELAQSEAYFHCHEWVRYFFHSGHLSID 369

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---E 331
           G KMSKS  NFITI   L         + A  +R   ++  + + I+F+   + EA   E
Sbjct: 370 GLKMSKSLKNFITIKTALTM-------YTARQLRTLFVIQSWDKSINFSTTVVNEALGKE 422

Query: 332 ILLSKW-----------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
             L  +                        Q  +        V   L ++ +T  AI  L
Sbjct: 423 KQLKNFFANVESHLRQHPMEGVQRPGLDEKQLLSRVDQAQIQVRERLEDNFDTAGAISEL 482

Query: 369 HKLARESTKNHDLLP 383
             L R+     D   
Sbjct: 483 LSLVRDVHSYIDKCK 497



 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 13/108 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIR-MYVC---GPTVYDFAHIGNARPMIVFDVLYRLL 57
           ++ + + N+L ++   F   D S      V    G  +  +     AR  +    + RL 
Sbjct: 13  RRGLMVNNSLAKEKVPFVTKDGSRNGEWEVVIWGGVRLDRWCIEELARGGVF---VARLA 69

Query: 58  ------RYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
                 R  Y    V YV NITD+DDKII RAR+ H       A + +
Sbjct: 70  YPVAVQRQDYFHYDVKYVMNITDVDDKIINRARRNHLMDQYRSAATDL 117


>gi|327292372|ref|XP_003230885.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326466921|gb|EGD92374.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 804

 Score =  290 bits (743), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 109/395 (27%), Positives = 175/395 (44%), Gaps = 51/395 (12%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T+     DI    ++  +        +   + +T +   +F++D   L  L P    R 
Sbjct: 210 ATFYDKTQDILYPHLDTLKGASIQGSDHSIFTRLTREYEDRFMQDVRDLNVLDPDEITRV 269

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDE----------QK 174
           T  +P+++  ++ II H   Y   +  + FD  +    G+ S  +++           + 
Sbjct: 270 TEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIENFEAAGN-SYARLEPWNRNDANRQSEG 328

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G+   ++  KK+ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH
Sbjct: 329 EGSLSNKQAEKKSSADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIH 388

Query: 235 GGGLDLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            GG+DL FPHH+NEIAQS           +  N +IH G L+++G KMSKS  NF TI +
Sbjct: 389 SGGIDLAFPHHDNEIAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRD 448

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
            L         W    +R+  L+  +R+ I+ T + +        K              
Sbjct: 449 ALRRGD-----WTPRSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRVKDPSVK 503

Query: 341 ---STSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLAREST----------KNHD 380
              +TS   +  A+ +A       L +  NT  A+ A+ +L  +              H 
Sbjct: 504 LPETTSDEELPAALKAAQHSVHKHLCDSFNTAGAMYAISELITKFNNTNEAALSAQNTHA 563

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           +     +  +I G+    +  ++NI    +++ +E
Sbjct: 564 VAKWLTSMVNIFGLNSTAKPDSENIGWHGDEIAEE 598



 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 47/130 (36%), Positives = 69/130 (53%), Gaps = 13/130 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y
Sbjct: 24  PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           + +  V Y+ NITD+DDKII R RQ+H     +     I          D   L      
Sbjct: 84  F-KFDVRYIMNITDVDDKIITRGRQQHLYNQFSAEHPSI----------DQELLDIAKAA 132

Query: 121 HQPRATNHIP 130
           ++   T+++P
Sbjct: 133 YEAYITDNLP 142


>gi|310799373|gb|EFQ34266.1| tRNA synthetase class I catalytic domain-containing protein
           [Glomerella graminicola M1.001]
          Length = 804

 Score =  290 bits (742), Expect = 4e-76,   Method: Composition-based stats.
 Identities = 106/398 (26%), Positives = 168/398 (42%), Gaps = 61/398 (15%)

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +  K   +   I +I    ++   +E          + +T    ++F  D   L CL P 
Sbjct: 172 FAIKDKKFYPGIDEILLPYLDSLYKETIDTSDQTIFTDLTQSMEREFFDDMDALNCLRPD 231

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR---------KID 171
              R T ++PQ+   +  I+  G AYE++  + FD ++    G+   R          + 
Sbjct: 232 VITRVTEYVPQIAEFVARIVDKGFAYESDGSVYFDITAFEKAGNTYARLRPGNRNDKSLQ 291

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           E   G        K+N  DF LWK+S   EP W+S WG+GRPGWHIECS M+S  LG   
Sbjct: 292 EDGEGALSKNLGEKRNEGDFALWKKSKKGEPYWDSRWGQGRPGWHIECSVMASDILGAQM 351

Query: 232 DIHGGGLDLIFPHHENEIAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           DIH GG+DL FPHH+NE+AQS               N ++H G L++ G KMSKS  NF 
Sbjct: 352 DIHSGGVDLAFPHHDNELAQSEAYYVDNSKGEHTWVNNFLHMGHLSISGSKMSKSLKNFQ 411

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKW------ 337
           TI + L T      ++ +  +R+  LM  + + ++ +     +A   E  ++ +      
Sbjct: 412 TIQDALAT------TYTSRGMRIVFLMGKWNDGVEISPDMRAQASSWEATINNFFTNVKA 465

Query: 338 --PQTSTSKGIID--------------------PAVLSALYNDLNTVSAIQALHKLARES 375
                S S   ++                      + +AL N  +T  A++ + +L  E+
Sbjct: 466 LVADVSASTAGVESLSISEKPSGSLVSELEKAKNDLHTALTNSFDTPQAMRVIQELVSEA 525

Query: 376 TK----------NHDLLPIFNASAHILGIEVCKEHLNK 403
            K             L+ +      ILG     E+   
Sbjct: 526 NKVVVSQEAEANLPALVAVARWITKILGTFGLDENATA 563



 Score =  123 bits (309), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 61/111 (54%), Gaps = 5/111 (4%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +K++N+L+  +   F  I P  +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+
Sbjct: 2   ESLKLHNSLKPGQPVPFTPIKPGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYF 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVK 109
           G   V +V NITD+DDKII +AR++           +   +       F  
Sbjct: 62  GAD-VKFVMNITDVDDKIIIKARRQRLLELEKQKSYSQDELAKLALTAFRA 111


>gi|295666742|ref|XP_002793921.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226277574|gb|EEH33140.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 820

 Score =  289 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 166/374 (44%), Gaps = 51/374 (13%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+ +N+ D+  + ++               + +T     +F+KD   L  L P    R T
Sbjct: 233 TFYKNVQDVLLEHLDSLYGSSIRGEDRSIFTKLTKTYEDRFMKDIRDLNVLDPDAVTRVT 292

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMG 176
            ++P+++  ++ I+ H  AY  ++  + FD ++    G+   R         K+  +  G
Sbjct: 293 EYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEG 352

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +     K++PADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH G
Sbjct: 353 ALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSG 412

Query: 237 GLDLIFPHHENEIAQSCCADR----IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           G+DL FPHH+NE+AQS          +   N ++H G L+++G KMSKS  NF TI E L
Sbjct: 413 GIDLAFPHHDNELAQSEAYWHENCAHDHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREAL 472

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------- 339
           +        W    +R+  L+  +++ I+ T   +        K                
Sbjct: 473 DKGD-----WTPRSLRIVFLLGGWKDGIEITEDLVKAGNAWEEKANNFFINARDSVAQTN 527

Query: 340 ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------D 380
                     +T+      AV   L +  NT  A+ A+ +L  +   ++          +
Sbjct: 528 SDAGSTDDTLATALKSAQDAVYQNLCDSFNTAGAMYAISELISKYNISNKSTLPVKDVQE 587

Query: 381 LLPIFNASAHILGI 394
                 +  +I G+
Sbjct: 588 AAVWVTSMVNIFGL 601



 Score =  122 bits (306), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIER 82
           +    V ++ NITD+DDK+  +
Sbjct: 84  F-NFDVQFIMNITDVDDKVRGK 104


>gi|283458070|ref|YP_003362681.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|310947212|sp|D2NT85|MSHC_ROTMD RecName: Full=L-cysteine:1D-myo-inositol
           2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
           Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
           ligase; Short=MSH ligase
 gi|283134096|dbj|BAI64861.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 453

 Score =  289 bits (741), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 109/397 (27%), Positives = 167/397 (42%), Gaps = 59/397 (14%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T   +I + Q  +     +YVCG T YD  H+G+A   + FD+L+R          
Sbjct: 35  RIFDTAAGEIVQVQ--EDKAASLYVCGITPYDATHMGHASTYVAFDLLHRAW--LDAGVP 90

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA         N     +    T+ F  D   L  + P H    
Sbjct: 91  VTYVQNVTDVDDPLLERA------TATNVDWRELAEDQTELFRTDMKALNVIPPAHYVGV 144

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPN-------Y---- 162
              I  +  LI+++   G AY              + ++  D  ++         Y    
Sbjct: 145 VESIEWLFPLIEDLFRRGLAYRVPGFTDEQGVVHPDGDVYLDLKAVRELPANAEGYSWAP 204

Query: 163 GSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHI 217
           G       DE           P +  K++  D +LW+     EP W+    G GRPGWHI
Sbjct: 205 GEVCHLTRDEMLEIFAERGGDPNRAGKRDALDPLLWRVEREGEPSWDAGELGAGRPGWHI 264

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           EC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G K
Sbjct: 265 ECTMIARRFVDGSLTVQAGGNDLTFPHHDLGAGHSWAVS-ARPHAKHYAHTGMVGLDGHK 323

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN + ++ L    +       A  +RLA++  HYR    +T + L  A+  L  +
Sbjct: 324 MSKSRGNLVLVSRLRAAGE------DANAVRLAIMGQHYRSDWFWTDELLEHAKARLDTY 377

Query: 338 PQT-------STSKGIIDPA-------VLSALYNDLN 360
                       S+G+ D A       V  AL  DLN
Sbjct: 378 RHAVSVAEGREGSEGVTDEAAVELLTTVREALGEDLN 414


>gi|17509795|ref|NP_491013.1| Cysteinyl tRNA Synthetase family member (crs-1) [Caenorhabditis
           elegans]
 gi|3319446|gb|AAC64633.1| Cysteinyl trna synthetase protein 1, isoform a, partially confirmed
           by transcript evidence [Caenorhabditis elegans]
          Length = 909

 Score =  289 bits (740), Expect = 7e-76,   Method: Composition-based stats.
 Identities = 124/487 (25%), Positives = 182/487 (37%), Gaps = 125/487 (25%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           DVL   L + +G+     VR+ +  DD                     +     ++F+ D
Sbjct: 348 DVLSEWLDHNHGKD----VRDHSVFDD---------------------LAKTYEKEFLAD 382

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-------- 161
             RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +           
Sbjct: 383 MARLNVLPVDVLTRVSEYVPEVITYVKKIISNGYAYAAEDGSVYFDTKAFEQNPKHFYAK 442

Query: 162 -----YGS-----FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                YG          K  E ++         K++P DF LWK S   EP W S WG G
Sbjct: 443 LVPEAYGEDSEQLLKNMKESEGELSMSDDRLKSKRSPNDFALWKSSKDGEPFWPSEWGNG 502

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N ++H G L
Sbjct: 503 RPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYFLHCGTL 562

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
            ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++   +  A 
Sbjct: 563 RIQGMKMSKSLKNFITIRKALED-------YTPRQLRLLFLMHNWADVLDYSSSTMERAL 615

Query: 331 -------------EILLSKWPQTSTSKGI----------------IDPAVLSALYNDLNT 361
                        +  L +  +   S+G                 +   V  AL + ++T
Sbjct: 616 QFEKITNEFFLLVKDFLRRHYKPDRSEGYQKFQGKELKLMEEFGKLKSEVHEALCDSVDT 675

Query: 362 VSAIQALHKLARESTKN----------------HDLLPIFNASAHILG--------IEVC 397
            S I+   +L                        ++         I G        I   
Sbjct: 676 RSVIEKFRELISLGNAYIVEKEKEGHVPNCLLLRNIAAYITNLLKIFGAIPQSNQEIGFV 735

Query: 398 KEH------------LNKNISIAIEKLVQ----ERLILLKMKK---FSSADYIRKQ-LES 437
            E                 +   ++ L Q     RLI  + K        D +R + L  
Sbjct: 736 SEDECNGEGASTSFNKEAVVMPYLDALAQFREKVRLIAKEHKVNGILEECDTLRDKTLTE 795

Query: 438 KGFILED 444
            G  LED
Sbjct: 796 LGVRLED 802



 Score =  133 bits (334), Expect = 7e-29,   Method: Composition-based stats.
 Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+
Sbjct: 181 PPQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYF 240

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V ++ NITD+DDKII+RARQ H
Sbjct: 241 GYD-VEFIMNITDVDDKIIKRARQSH 265


>gi|226287115|gb|EEH42628.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 830

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 165/374 (44%), Gaps = 51/374 (13%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+ +N+ D+  + ++               + +T     +F+KD   L  L P    R T
Sbjct: 233 TFYKNVQDVLLEHLDSLYGSSIRGEDRSIFTKLTKTYEDRFMKDIRDLNVLDPDAVTRVT 292

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMG 176
            ++P+++  ++ I+ H  AY  ++  + FD ++    G+   R         K+  +  G
Sbjct: 293 EYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEG 352

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +     K++PADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH G
Sbjct: 353 ALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSG 412

Query: 237 GLDLIFPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           G+DL FPHH+NE+AQS              N ++H G L+++G KMSKS  NF TI E L
Sbjct: 413 GIDLAFPHHDNELAQSEAYWHENCAQNHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREAL 472

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------- 339
           +        W    +R+  L+  +++ I+ T   +        K                
Sbjct: 473 DKGD-----WTPRSLRIVFLLGGWKDGIEITEDLVKAGNAWEEKANNFFINARDSVAQAN 527

Query: 340 ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------D 380
                     +T+      AV   L +  NT  A+ A+ +L  +   ++          +
Sbjct: 528 SDAGSTDDTLATALKSAQDAVYQNLCDSFNTAGAMHAISELISKYNISNKSTLPVKDVQE 587

Query: 381 LLPIFNASAHILGI 394
                 +  +I G+
Sbjct: 588 AAVWVTSMVNIFGL 601



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIER 82
           +    V ++ NITD+DDK+  +
Sbjct: 84  F-NFDVQFIMNITDVDDKVRGK 104


>gi|17509797|ref|NP_491014.1| Cysteinyl tRNA Synthetase family member (crs-1) [Caenorhabditis
           elegans]
 gi|14574274|gb|AAK68426.1|AF077541_9 Cysteinyl trna synthetase protein 1, isoform b, partially confirmed
           by transcript evidence [Caenorhabditis elegans]
          Length = 908

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 124/487 (25%), Positives = 182/487 (37%), Gaps = 125/487 (25%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           DVL   L + +G+     VR+ +  DD                     +     ++F+ D
Sbjct: 347 DVLSEWLDHNHGKD----VRDHSVFDD---------------------LAKTYEKEFLAD 381

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-------- 161
             RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +           
Sbjct: 382 MARLNVLPVDVLTRVSEYVPEVITYVKKIISNGYAYAAEDGSVYFDTKAFEQNPKHFYAK 441

Query: 162 -----YGS-----FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                YG          K  E ++         K++P DF LWK S   EP W S WG G
Sbjct: 442 LVPEAYGEDSEQLLKNMKESEGELSMSDDRLKSKRSPNDFALWKSSKDGEPFWPSEWGNG 501

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N ++H G L
Sbjct: 502 RPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYFLHCGTL 561

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
            ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++   +  A 
Sbjct: 562 RIQGMKMSKSLKNFITIRKALED-------YTPRQLRLLFLMHNWADVLDYSSSTMERAL 614

Query: 331 -------------EILLSKWPQTSTSKGI----------------IDPAVLSALYNDLNT 361
                        +  L +  +   S+G                 +   V  AL + ++T
Sbjct: 615 QFEKITNEFFLLVKDFLRRHYKPDRSEGYQKFQGKELKLMEEFGKLKSEVHEALCDSVDT 674

Query: 362 VSAIQALHKLARESTKN----------------HDLLPIFNASAHILG--------IEVC 397
            S I+   +L                        ++         I G        I   
Sbjct: 675 RSVIEKFRELISLGNAYIVEKEKEGHVPNCLLLRNIAAYITNLLKIFGAIPQSNQEIGFV 734

Query: 398 KEH------------LNKNISIAIEKLVQ----ERLILLKMKK---FSSADYIRKQ-LES 437
            E                 +   ++ L Q     RLI  + K        D +R + L  
Sbjct: 735 SEDECNGEGASTSFNKEAVVMPYLDALAQFREKVRLIAKEHKVNGILEECDTLRDKTLTE 794

Query: 438 KGFILED 444
            G  LED
Sbjct: 795 LGVRLED 801



 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+
Sbjct: 180 PPQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYF 239

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V ++ NITD+DDKII+RARQ H
Sbjct: 240 GYD-VEFIMNITDVDDKIIKRARQSH 264


>gi|225683481|gb|EEH21765.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 792

 Score =  289 bits (739), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 104/374 (27%), Positives = 165/374 (44%), Gaps = 51/374 (13%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
           T+ +N+ D+  + ++               + +T     +F+KD   L  L P    R T
Sbjct: 195 TFYKNVQDVLLEHLDSLYGSSIRGEDRSIFTKLTKTYEDRFMKDIRDLNVLDPDAVTRVT 254

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMG 176
            ++P+++  ++ I+ H  AY  ++  + FD ++    G+   R         K+  +  G
Sbjct: 255 EYMPEIVQFVERIVQHKFAYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEG 314

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
             +     K++PADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH G
Sbjct: 315 ALINRTTEKRSPADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSG 374

Query: 237 GLDLIFPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           G+DL FPHH+NE+AQS              N ++H G L+++G KMSKS  NF TI E L
Sbjct: 375 GIDLAFPHHDNELAQSEAYWHENSAQNHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREAL 434

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------- 339
           +        W    +R+  L+  +++ I+ T   +        K                
Sbjct: 435 DKGD-----WNPRSLRIVFLLGGWKDGIEITEDLVKAGNAWEEKANNFFINARDSVAQAN 489

Query: 340 ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------D 380
                     +T+      AV   L +  NT  A+ A+ +L  +   ++          +
Sbjct: 490 SDAGSTDDTLATALKSAQDAVYQNLCDSFNTAGAMHAISELISKYNISNKSTLPVKDVQE 549

Query: 381 LLPIFNASAHILGI 394
                 +  +I G+
Sbjct: 550 AAVWVTSMVNIFGL 563



 Score =  122 bits (306), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 3/82 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIER 82
           +    V ++ NITD+DDK+  +
Sbjct: 84  F-NFDVQFIMNITDVDDKVRGK 104


>gi|319777676|ref|YP_004137327.1| cysteinyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|238810260|dbj|BAH70050.1| hypothetical protein [Mycoplasma fermentans PG18]
 gi|318038751|gb|ADV34950.1| Cysteinyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 411

 Score =  288 bits (738), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 123/436 (28%), Positives = 205/436 (47%), Gaps = 48/436 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN  P++ FD++ +  R     +  T+V NITDIDDKII RAR+
Sbjct: 2   LKIYVCGPTVYNDLHIGNMVPILTFDLMLKARRVLG--EKFTFVHNITDIDDKIINRARE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 +N +   ++ K T+ ++K    L     +H  + T+++  +I  +   + + +A
Sbjct: 60  ------LNISEKELSQKYTKDYLKLLKTLDVDTISHLEKVTDNMGLIIEYVNKQVKNNNA 113

Query: 146 Y-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +    + FD     N YG  +   +D+        +  +KK  ADF LWK++      
Sbjct: 114 YIDQEGNVWFDVKKFENHYGQVANLNLDKMIF---EEQNNNKKFEADFALWKKTNVG-IQ 169

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           ++SP+ +GRPGWH EC+ + + +      DIHGGG+DL FPHHENE  Q       +   
Sbjct: 170 FDSPFSKGRPGWHTECAVLINKHFKNKGLDIHGGGMDLTFPHHENENIQHFALYNQD-IT 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G +N EG KMSKS GN I   + L       +     +++L +L +    PI+ 
Sbjct: 229 KEWIRCGQINYEGEKMSKSLGNVILAKDFL-------KEHDREILKLIILSSKISAPINV 281

Query: 323 TVQRLTEAEILLSK-----------WPQTSTSKGIIDPAVLSALY-------NDLNTVSA 364
           T + +    ++L+K           +     SK   +   +  +        +D N    
Sbjct: 282 TNELIENMYVILNKYKKLIFKFFINFKNIDKSKINKNEEFIKIMNSLKIGDFSDFN---- 337

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
              L++  +E  K  ++        + L +   +  +  N + A E L  +    +  K+
Sbjct: 338 -YLLNEQIKEFNKTKNIKNA-EIIFNTLKVIHPQLTIKANYNKAFE-LFDQWRCFIDKKE 394

Query: 425 FSSADYIRKQLESKGF 440
           +  AD IRK+L   G 
Sbjct: 395 YKQADKIRKKLMKLGV 410


>gi|308190282|ref|YP_003923213.1| cysteine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307625024|gb|ADN69329.1| cysteine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 411

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 123/436 (28%), Positives = 204/436 (46%), Gaps = 48/436 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN  P++ FD++ +  R     +  T+V NITDIDDKII RAR+
Sbjct: 2   LKIYVCGPTVYNDLHIGNMVPILTFDLMLKARRVLG--EKFTFVHNITDIDDKIINRARE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                 +N +   ++ K T+ ++K    L     +H  + T+++  +I  +   + + +A
Sbjct: 60  ------LNISEKELSQKYTKDYLKLLKTLDVDTISHLEKVTDNMGLIIEYVNKQVKNNNA 113

Query: 146 Y-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +    + FD     N YG  +   +D+        +  +KK  ADF LWK++      
Sbjct: 114 YIDQEGNVWFDVKKFENHYGQVANLNLDKMIF---EEQNNNKKFEADFALWKKTNVG-IQ 169

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           ++SP+ +GRPGWH EC  + + +      DIHGGG+DL FPHHENE  Q       +   
Sbjct: 170 FDSPFSKGRPGWHTECVVLINKHFKNKGLDIHGGGMDLTFPHHENENIQHFALYNQD-IT 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G +N EG KMSKS GN I   + L       +     +++L +L +    PI+ 
Sbjct: 229 KEWIRCGQINYEGEKMSKSLGNVILAKDFL-------KEHDREILKLIILSSKISAPINV 281

Query: 323 TVQRLTEAEILLSK-----------WPQTSTSKGIIDPAVLSALY-------NDLNTVSA 364
           T + +    ++L+K           +     SK   +   +  +        +D N    
Sbjct: 282 TNELIENMYVILNKYKKLIFKFFINFKNIDKSKINKNEEFIKIMNSLKIGDFSDFN---- 337

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
              L++  +E  K  ++        + L +   +  +  N + A E L  +    +  K+
Sbjct: 338 -YLLNEQIKEFNKTKNIKNA-EIIFNTLKVIHPQLTIKANYNKAFE-LFDQWRCFIDKKE 394

Query: 425 FSSADYIRKQLESKGF 440
           +  AD IRK+L   G 
Sbjct: 395 YKQADKIRKKLMKLGV 410


>gi|303319833|ref|XP_003069916.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
           C735 delta SOWgp]
 gi|240109602|gb|EER27771.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
           C735 delta SOWgp]
          Length = 839

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 102/356 (28%), Positives = 155/356 (43%), Gaps = 50/356 (14%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIF 154
            + ++ +   +F++D   L  L      R T  IP+++  ++ I+ HG AY  A+  + F
Sbjct: 274 FTQLSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYF 333

Query: 155 DTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           D ++    G+   R          +     G  + +   K++ ADF LWK S   EP W 
Sbjct: 334 DIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWKASKAGEPSWP 393

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
           SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS          ++ 
Sbjct: 394 SPWGLGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW 453

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L+++G KMSKS  NF TI E LE        W    +R+  LM ++ + I+
Sbjct: 454 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGNWADGIE 508

Query: 322 FTVQRLTEAEILLSKW---------------------PQTSTSKGIIDPAVLSALYNDLN 360
            T   +        K                         +        AV  +L +  N
Sbjct: 509 ITEDLVKAGNAWEEKLNNFFLSVRNLAAENELSSSTDDALALQLKSAQKAVHDSLCDSFN 568

Query: 361 TVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNIS 406
           T  A+ A+  L  +               D+     +  +I G+       ++ I 
Sbjct: 569 TAGAMIAISGLVTQYNSADKSKLNAQDVQDVAKWVTSMVNIFGLNGSATPASEEIG 624



 Score =  135 bits (340), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 12/136 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L R    F  +DP  + +  Y CGPTVYD AH+G+AR  +  D+L RLLR Y
Sbjct: 58  PPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRDY 117

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI--------SIITSKNTQQFVKDTT 112
           + +  V ++ NITD+DDKII RARQ+H  +    +           ITS       K+  
Sbjct: 118 F-KFDVKFIMNITDVDDKIITRARQQHLFMEYVTSHPTIDDSVVETITSAYESYVRKNLP 176

Query: 113 RL-ACLAPTHQPRATN 127
            L     P   P A  
Sbjct: 177 LLEHVPTPKAFPEAVE 192


>gi|325066743|ref|ZP_08125416.1| cysteinyl-tRNA synthetase [Actinomyces oris K20]
          Length = 229

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 100/237 (42%), Positives = 144/237 (60%), Gaps = 18/237 (7%)

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPN 161
             ++F      L   APT++PRAT HIP+MI L+Q ++  GHAY      + +D  S+P 
Sbjct: 1   FEREFDAAYRALGVDAPTYEPRATGHIPEMIDLVQRLLDAGHAYVGESGNVYYDVRSLPG 60

Query: 162 YGSFSRRKIDEQ-----KMGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRP 213
           YGS + +++++      +       +  K++P DF LWK + P EP    W++PWGRGRP
Sbjct: 61  YGSLTNQRLEDLATTEDESQLDDDVEADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRP 120

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GWH+ECS MS  YLG+ FDIHGGG+DL FPHHENE AQS  A      A  W+HN ++ +
Sbjct: 121 GWHLECSTMSRRYLGETFDIHGGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTI 178

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +G KMSKS GN + + ELL       + + A V+RLA+   H+R  ++F+ + L +A
Sbjct: 179 KGEKMSKSLGNSLVVAELL-------KRYDAAVLRLALGTVHHRSTVEFSEETLADA 228


>gi|119183429|ref|XP_001242754.1| hypothetical protein CIMG_06650 [Coccidioides immitis RS]
          Length = 809

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 102/356 (28%), Positives = 155/356 (43%), Gaps = 50/356 (14%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIF 154
            + ++ +   +F++D   L  L      R T  IP+++  ++ I+ HG AY  A+  + F
Sbjct: 244 FTKLSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYF 303

Query: 155 DTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           D ++    G+   R          +     G  + +   K++ ADF LWK S   EP W 
Sbjct: 304 DIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKAVEKRSKADFALWKASKAGEPSWP 363

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
           SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS          ++ 
Sbjct: 364 SPWGPGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW 423

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L+++G KMSKS  NF TI E LE        W    +R+  LM ++ + I+
Sbjct: 424 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGNWADGIE 478

Query: 322 FTVQRLTEAEILLSKWPQ---------------------TSTSKGIIDPAVLSALYNDLN 360
            T   +        K                         +        AV  +L +  N
Sbjct: 479 ITEDLVKAGNAWEEKLNNFFLSVRNLAAENELSSSTDDSLALQLKAAQKAVHDSLCDSFN 538

Query: 361 TVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNIS 406
           T  A+ A+  L  +               D+     +  +I G+       ++ I 
Sbjct: 539 TAGAMIAISGLVTQYNSADKSKLNAQDVQDVAKWVTSMVNIFGLNGSAMPASEEIG 594



 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L R    F  +DP  + +  Y CGPTVYD AH+G+AR  I+     + L   
Sbjct: 58  PPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYIITRARQQHL--- 114

Query: 61  YGEKCVTYVRNITDIDDKIIE 81
                + YV +   IDD ++E
Sbjct: 115 ----FMEYVTSHPTIDDSVVE 131


>gi|326480593|gb|EGE04603.1| cysteinyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 790

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/395 (27%), Positives = 174/395 (44%), Gaps = 51/395 (12%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T+     DI    ++  +        +   + +T +   +F++D   L  L P    R 
Sbjct: 210 ATFYEKTQDILYPHLDTLKGASIQGSDHSIFTRLTKEYEDRFMQDVRDLNVLDPDEITRV 269

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDE----------QK 174
           T  +P+++  ++ II H   Y   +  + FD  +    G+ S  +++           + 
Sbjct: 270 TEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIENFEAAGN-SYARLEPWNRNDANRQSEG 328

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G+   ++  KK+ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH
Sbjct: 329 EGSLSNKQAKKKSSADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIH 388

Query: 235 GGGLDLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            GG+DL FPHH+NEIAQS           +  N +IH G L+++G KMSKS  NF TI +
Sbjct: 389 SGGIDLAFPHHDNEIAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRD 448

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
            L         W    +R+  L+  +R+ I+ T + +        K              
Sbjct: 449 ALRRGD-----WTPRSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVK 503

Query: 341 ---STSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLAREST----------KNHD 380
              +TS   +  A+ +A       L +  NT  A+ A+ +L  +              H 
Sbjct: 504 LPETTSDEELPAALKAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTNEAALSAQNTHA 563

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           +     +  +I G+       ++NI    +++ +E
Sbjct: 564 VAKWLTSMVNIFGLNSTAGPDSENIGWYGDEIAEE 598



 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y
Sbjct: 24  PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           + +  V Y+ NITD+DDKII R RQ+H     
Sbjct: 84  F-KFDVKYIMNITDVDDKIITRGRQQHLYDQF 114


>gi|255327118|ref|ZP_05368193.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia mucilaginosa ATCC 25296]
 gi|255295736|gb|EET75078.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
           ligase [Rothia mucilaginosa ATCC 25296]
          Length = 438

 Score =  287 bits (736), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 109/397 (27%), Positives = 167/397 (42%), Gaps = 59/397 (14%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I++T   +I + Q  +     +YVCG T YD  H+G+A   + FD+L+R          
Sbjct: 20  RIFDTSAGEIVQVQ--EDKAASLYVCGITPYDATHMGHASTYVAFDLLHRAW--LDAGVP 75

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           VTYV+N+TD+DD ++ERA         N     +    T+ F  D   L  + P H    
Sbjct: 76  VTYVQNVTDVDDPLLERA------TATNVDWRELAEDQTELFRTDMKALNVIPPAHYVGV 129

Query: 126 TNHIPQMIYLIQNIILHGHAYEA------------NNEIIFDTSSIPN-------Y---- 162
              I  +  LI+++   G AY              + ++  D  ++         Y    
Sbjct: 130 VESIEWLFPLIEDLFRRGLAYRVPGFTDEQGVVHPDGDVYLDLKAVRELPANAEGYSWAP 189

Query: 163 GSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHI 217
           G       DE           P +  K++  D +LW+     EP W+    G GRPGWHI
Sbjct: 190 GEVCHLSRDEMLEIFAERGGDPNRAGKRDALDPLLWRVEREGEPSWDAGELGAGRPGWHI 249

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           EC+ ++  ++     +  GG DL FPHH+     S         A  + H G + L+G K
Sbjct: 250 ECTMIARRFVDGSLTVQAGGNDLTFPHHDLGAGHSWAVS-ARPHAKHYAHTGMVGLDGHK 308

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN + ++ L    +       A  +RLA++  HYR    +T + L  A+  L  +
Sbjct: 309 MSKSRGNLVLVSRLRAAGE------DANAVRLAIMGQHYRSDWFWTDELLEHAKARLDTY 362

Query: 338 PQT-------STSKGIIDP-------AVLSALYNDLN 360
                       S+G+ D        AV  AL  DLN
Sbjct: 363 RHAVSVAEGREGSEGVTDEAAVELLAAVREALGEDLN 399


>gi|308198189|ref|XP_001387132.2| cysteinyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
 gi|149389073|gb|EAZ63109.2| cysteinyl-tRNA synthetase [Pichia stipitis CBS 6054]
          Length = 776

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 119/435 (27%), Positives = 179/435 (41%), Gaps = 89/435 (20%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIF 154
              + S    +F +D  RL  L  T   R + +IP +I  I  II +G  Y   +  + F
Sbjct: 238 FRKLPSFWENKFDQDMARLNVLPSTVTTRVSEYIPDIIEFIDKIIENGFGYPTKDGSVYF 297

Query: 155 DTSSI-----PNYGSFSRRKIDEQ-----KMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           DT+        +Y         +        G+    +  KK+ ADF LWK S P EP W
Sbjct: 298 DTAKFENDPNHDYAKLQPWNKGDMSLINDGEGSLTTGQDTKKSSADFALWKASKPGEPSW 357

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            S WG GRPGWHIECS M+S   G+  DIH GG+DL FPHH+NE+AQS      ++  N 
Sbjct: 358 PSKWGEGRPGWHIECSVMASDITGQTMDIHSGGIDLCFPHHDNELAQSEAYFDNKQWVNY 417

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H+G L+++G+KMSKS  NFITI + LE        + +  +RL   ++ + +P+DF  
Sbjct: 418 FMHSGHLHIQGQKMSKSLKNFITIEQALED-------FSSRQLRLVFALSSWEKPLDFKD 470

Query: 325 QRLTEAEILLSKWPQTSTSKGII---------DPAVLSA--------LYNDLNTV----- 362
             ++E + + S + +  T+   +         D   +S         LY+DL+       
Sbjct: 471 SLISEVKTIESAFSKFFTNVRALNNDYKHKVNDGEFVSKKLSKYEKQLYDDLDIAQDEVD 530

Query: 363 ----------SAIQALHKLARESTKNHDLLPI----------------FNASAHILGIEV 396
                      A++A+  L  +S     L                         ILG E 
Sbjct: 531 VAFNDNLASGQALRAIQILISKSNNYIQLAASGETELRIDVLLQVTRWIVKILEILGFEA 590

Query: 397 ------------CKEHLNKNISIA---IEKLVQERLILL-----KMKK---FSSADYIRK 433
                         E       IA   ++ L Q R  +      K        + D IR 
Sbjct: 591 RADRLGWVDSSEAGEGAGSTEDIALPYVKALSQFRDAVRNLAISKADNSEILKACDTIRS 650

Query: 434 QLESKGFILEDYKNP 448
            L +    L+D  + 
Sbjct: 651 DLINLSVSLDDRPSG 665



 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 42/90 (46%), Positives = 59/90 (65%), Gaps = 1/90 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K  +KIYN+L R  TEF  I P +I  Y CGPTVYD +H+G+AR  +  D+  R+ + Y+
Sbjct: 35  KPVLKIYNSLTRSKTEFVPIVPGHITWYCCGPTVYDHSHMGHARNYVSTDICRRIFQDYF 94

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           G   V +++N+TDIDDKII  ARQ++    
Sbjct: 95  GYN-VKFIQNVTDIDDKIIIAARQQYLFEQ 123


>gi|164658560|ref|XP_001730405.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
 gi|159104301|gb|EDP43191.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
          Length = 823

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 121/469 (25%), Positives = 180/469 (38%), Gaps = 122/469 (26%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE---- 151
              + +     F  D  RL    PT   R + ++P+++  I+ I+ +G AY  +      
Sbjct: 249 FRKLAAYWEAAFFHDMKRLHVEPPTILTRVSEYVPEIVQFIERILQNGFAYVDDASAESK 308

Query: 152 -IIFDTSSIPN--------------------YGSF---SRRKIDEQKMGTRVPEKYHKKN 187
            + F TS                        Y      S+   +  + G        K+N
Sbjct: 309 NVWFATSQFDGSACVAGALAENQPEAREHHFYAKLAPWSKGNRELLEEGEGALAAKGKRN 368

Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
            ADF LWKR+ P EP W SPWG GRPGWHIECS M+S  LG   DIH GG+DL+FPHH+N
Sbjct: 369 AADFALWKRAKPGEPAWPSPWGPGRPGWHIECSVMASKVLGSQIDIHSGGIDLMFPHHDN 428

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           E+AQS       +  N ++H G L++EG KMSKS  NFI+I+E L         + A  +
Sbjct: 429 ELAQSEAFHGCPQWINYFLHTGHLHIEGLKMSKSLKNFISIDEALAR-------YTARQL 481

Query: 308 RLAMLMTHYREPIDFTVQRLTE---AEILLSKW--------------------------P 338
           RLA LM  +   +DF    + +   AE  L+ +                          P
Sbjct: 482 RLAFLMHPWHAKMDFRESGMAQVRAAETSLNNFFHGVIALEREYRAKGPAYSDGQHHYGP 541

Query: 339 QTSTSKGIIDPA---VLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPI 384
                   ++ A     +A+ ++ +T   I  L  L            RE+     L+ +
Sbjct: 542 DAQAVASALEDAQLQFRAAMCDNFDTPRGIDILLDLVSRANVYERGTTRENLHVGVLVNV 601

Query: 385 FNASAHI---LGI----------------------EVCKEHLNKNISIAIEK-------- 411
               AHI   LG+                      +            A+++        
Sbjct: 602 AQYVAHIVRMLGLGEGPARDGDLSWGHAPRASSATDTASSTSLSLDDSALDRDEVAAPFV 661

Query: 412 ------LVQERLILLKM---KKF-SSADYIRK-QLESKGFILEDYKNPD 449
                   + R +        +F   AD IR  +L   G  LED ++  
Sbjct: 662 RVLSSFRDRVRQLARTNASSSEFLKLADTIRDMELVDLGVALEDQEDGQ 710



 Score =  127 bits (319), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ +YN+L R    F       +  Y CGPTVYD +H+G+AR  +  DV+ R++R Y G
Sbjct: 22  PELHVYNSLTRSKERFVPKRGRLVTWYNCGPTVYDASHMGHARNYVTQDVIRRIMRDYLG 81

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
              V +V N+TDIDDKII RARQE            +T      
Sbjct: 82  YD-VNFVMNVTDIDDKIIMRARQEFLLQQFRSQHPHLTHALLDA 124


>gi|50291223|ref|XP_448044.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527355|emb|CAG60995.1| unnamed protein product [Candida glabrata]
          Length = 788

 Score =  287 bits (735), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 99/318 (31%), Positives = 156/318 (49%), Gaps = 27/318 (8%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++   +I   +    + +   +Q+  D   L  + P    R + ++P+++  +++II +
Sbjct: 229 DKELGSTINDPEIFRKLPAYWEKQYDSDMAALNVIPPNVTTRVSEYVPEIVSFVEDIINN 288

Query: 143 GHAYEA-NNEIIFDTSSI-----PNYGS---FSRRKID---EQKMGTRVPEKYHKKNPAD 190
           G+AY   +  + FDT         +Y     +++ K+D   + +      +   KK+  D
Sbjct: 289 GYAYATNDGSVYFDTVRFDQNEKHDYAKCQPWNKGKLDLINDGEGSLSNFDNNGKKSAND 348

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           F LWK S P EP W+SPWG+GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+A
Sbjct: 349 FALWKGSKPGEPAWDSPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELA 408

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS      ++  N ++H G L++EG+KMSKS  NFITI E L       + +    +RLA
Sbjct: 409 QSEAKFDNKQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------QKYTPRQLRLA 461

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
                +   +DF    + E +   +       +         S+L +D     +I    K
Sbjct: 462 FASVPWNNQLDFKESLIHEVKSFETSMNNFFANVRAHYNDYKSSLEDD-----SIIVSKK 516

Query: 371 LARESTKNHDLLPIFNAS 388
           L   +    DLL  F  S
Sbjct: 517 L---TNLEKDLLEEFKKS 531



 Score =  121 bits (305), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 2/89 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R    F     +  +  Y CGPTVYD +H+G+AR  +  D+  RL++ Y+G 
Sbjct: 39  LKLYNSLTRSKEVFAPSSGTKTVSWYSCGPTVYDASHMGHARNYVSIDINRRLIQNYFGY 98

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPI 92
             + +V+N+TDIDDKII RAR  +     
Sbjct: 99  D-IQFVQNVTDIDDKIIIRARHNYLFEEF 126


>gi|326469078|gb|EGD93087.1| cysteinyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 804

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 109/395 (27%), Positives = 173/395 (43%), Gaps = 51/395 (12%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T+     DI    ++  +            + +T +   +F++D   L  L P    R 
Sbjct: 210 ATFYEKTQDILYPHLDTLKGASIQGSDYSIFTRLTKEYEDRFMQDVRDLNVLDPDEITRV 269

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDE----------QK 174
           T  +P+++  ++ II H   Y   +  + FD  +    G+ S  +++           + 
Sbjct: 270 TEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIENFEAAGN-SYARLEPWNRNDANRQSEG 328

Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
            G+   ++  KK+ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH
Sbjct: 329 EGSLSNKQAKKKSSADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIH 388

Query: 235 GGGLDLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            GG+DL FPHH+NEIAQS           +  N +IH G L+++G KMSKS  NF TI +
Sbjct: 389 SGGIDLAFPHHDNEIAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRD 448

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
            L         W    +R+  L+  +R+ I+ T + +        K              
Sbjct: 449 ALRRGD-----WTPRSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVK 503

Query: 341 ---STSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLAREST----------KNHD 380
              +TS   +  A+ +A       L +  NT  A+ A+ +L  +              H 
Sbjct: 504 LLETTSDEELPAALKAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTNEAALSAQNTHA 563

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           +     +  +I G+       ++NI    +++ +E
Sbjct: 564 VAKWLTSMVNIFGLNSTAGPDSENIGWYGDEIAEE 598



 Score =  128 bits (323), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 42/92 (45%), Positives = 58/92 (63%), Gaps = 3/92 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  +DP    +  Y CGPTVYD AH+G+AR  +  D++ R+LR Y
Sbjct: 24  PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           + +  V Y+ NITD+DDKII R RQ+H     
Sbjct: 84  F-KFDVKYIMNITDVDDKIITRGRQQHLYDQF 114


>gi|115741226|ref|XP_001190614.1| PREDICTED: similar to Cars protein, partial [Strongylocentrotus
           purpuratus]
          Length = 596

 Score =  287 bits (735), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 94/273 (34%), Positives = 138/273 (50%), Gaps = 21/273 (7%)

Query: 72  ITDIDDKIIERARQEHPSIPINDA-ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           +T+  D + E    +      + +  S++      +F  D   L  L      R + ++P
Sbjct: 176 LTEAKDPLAEMLDAQKGCDVSDKSIFSVLPQHWEAEFHSDMNALNVLPADVLTRVSEYVP 235

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGT 177
           ++I  +Q II  G  YE+N  + F TS   N             YG  +     E  +  
Sbjct: 236 EVIDYVQKIIDRGFGYESNGSVYFTTSKFDNDDSHHYAKLVPEAYGDQAALAEGEGDLSI 295

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K++  DF LWK S P EP WESPWG GRPGWHIECSAM+S  LG+  DIH GG
Sbjct: 296 SPDQLQEKQSANDFALWKNSKPGEPEWESPWGMGRPGWHIECSAMASSILGESMDIHTGG 355

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH+NE+AQ+      +     ++H+G L ++G KMSKS  NFITI + LET   
Sbjct: 356 ADLKFPHHDNELAQAEAHYGNDDWVRYFLHSGHLTIQGCKMSKSLKNFITIKQALET--- 412

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
               + +  IRL  L+  +++ +D++   +  A
Sbjct: 413 ----YSSRQIRLVFLLHSWKDTLDYSTATMECA 441



 Score =  134 bits (337), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K +++ +N+L R+   F   +   +  Y CGPTVYD AH+G+AR  I FD+L R++  Y+
Sbjct: 23  KAQLRHFNSLTRQKELFVPQEGKRVSWYSCGPTVYDAAHMGHARSYISFDILRRVMTKYF 82

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
               VTYV NITD+DDKII+RAR  +     
Sbjct: 83  -NYDVTYVMNITDVDDKIIKRARTNYLYDQY 112


>gi|257056300|ref|YP_003134132.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
 gi|256586172|gb|ACU97305.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
          Length = 382

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 106/353 (30%), Positives = 166/353 (47%), Gaps = 31/353 (8%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
             +R+Y CG T YD  H+G+A   +  D L R+LR    E      RN+TD+DD +   A
Sbjct: 29  DRVRIYACGITPYDVTHLGHATTFVWVDTLRRVLRVLGVE--PVVCRNVTDVDDVLDAAA 86

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
                            + +  +F  D + L    P ++PRA  ++  +I L   +   G
Sbjct: 87  ------HRAGIRYDHYAAFHELRFTDDMSALGVSIPDYEPRAHRYVDTVIRLAAALAESG 140

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQ------KMGTRVPEKYHKKNPADFILWKRS 197
            AY  +  + F   S+      +R ++DE       +     P+   K++P D  +W+ +
Sbjct: 141 AAYVRDGGVYFRGRSV-----VARSQLDEGTALRLAREYGGRPDDPAKEDPFDVAVWQPA 195

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
            P  P W+SPWG GRPGWH EC AMS+   G   DIH GG DL FPHH    A +     
Sbjct: 196 EPEHPAWDSPWGPGRPGWHAECVAMSATTFGPCVDIHAGGADLRFPHHAYHAAMAEAFTG 255

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
           +   A  W   G + ++G KM+KS  N + + +LL+T       +PA V+RLA++   + 
Sbjct: 256 VTPYARAWFRVGTVTVDGEKMAKSADNLVLVRDLLQT-------YPAAVVRLAIIDRPWA 308

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK-GIIDPAVLSA----LYNDLNTVSAI 365
           +P ++    L  A   L    Q +  + G  D A ++     L +DL+  +A+
Sbjct: 309 QPWEYAPGVLDVAAARLEDLHQAAGRRVGHTDEAGVAQLRQLLADDLDVPAAL 361


>gi|156063134|ref|XP_001597489.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980]
 gi|154697019|gb|EDN96757.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 753

 Score =  285 bits (731), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 101/358 (28%), Positives = 155/358 (43%), Gaps = 59/358 (16%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T    +QF++D   L  L P    R T ++P++   ++ II  G AYE++  + FD ++
Sbjct: 169 VTQYWEEQFMEDMDALNVLRPDVITRVTTYVPKIATFVEKIIQKGFAYESDGSVYFDIAA 228

Query: 159 IPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G+   R          + E+  G+       K+   DF LWK+S   EP W SPWG
Sbjct: 229 FEKAGNPYARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWG 288

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-----DRIEKTANI 264
            GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS            +  N 
Sbjct: 289 EGRPGWHIECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCEHEHGPHEWVNY 348

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G L++ G KMSKS  NF TI + L T       +    +R+  LM  + + ++ + 
Sbjct: 349 FLHMGHLSIAGSKMSKSLKNFQTIRDALATD------YTPRSMRIVFLMGRWNDGVEISP 402

Query: 325 Q--RLTEA-EILLSKW--------------------------PQTSTSKGIIDPAVLSAL 355
               + +A E  ++ +                          P+   +       + +AL
Sbjct: 403 DMRLMADAWEATVNNFFVNVKSLIIEAGNSRSDEELKSLSIHPELQIALDKAQADLQTAL 462

Query: 356 YNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHILGIEVCKEHLNK 403
               +T  A+  L +L +ES               L  +      ILGI     +   
Sbjct: 463 TESFDTPRAMLILQELIKESNVHIGSHKNDLDIQGLEKVARWITKILGIFGLDANATA 520



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)

Query: 4  KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPT 34
          ++K++N+L+      F  I+   +  YVCGPT
Sbjct: 3  QLKVHNSLKPGGPVPFVPIEKGKVSWYVCGPT 34


>gi|115401840|ref|XP_001216508.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
 gi|114190449|gb|EAU32149.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
          Length = 777

 Score =  285 bits (730), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 113/387 (29%), Positives = 165/387 (42%), Gaps = 52/387 (13%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            K   +     DI    ++           +     +T K  ++F +D   L  LAP   
Sbjct: 173 GKLPEFFAKTDDILLPYLDALHGAEMDSNNHKIYLELTQKFERRFFEDMNALNVLAPDQL 232

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGS-FSR--------RKIDE 172
            R T ++PQ++  ++ I+ +G  Y   +  + FD  S    G  +SR        R +  
Sbjct: 233 TRVTEYVPQIVRFVEKIVANGFGYATPDGSVYFDIDSFEKAGHNYSRLEPWNKNDRALQA 292

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
              G+    +  K+N   F LWK S P EP W SPWG GRPGWHIECSAM+S  +GK  D
Sbjct: 293 DGEGSLSKGRSMKRNENHFALWKASKPGEPAWPSPWGYGRPGWHIECSAMASEVIGKTID 352

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           IH GG+DL FPHH+NE+AQS           +  N +IH G L + G KMSKS  N+ TI
Sbjct: 353 IHSGGVDLRFPHHDNELAQSEAYWSTPGCQVQWTNYFIHMGQLRIRGLKMSKSLKNYTTI 412

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-----------ILLSKW 337
              L       + W A  +R+  L+  +++ I+ T + +                 L  W
Sbjct: 413 RTFL-----SQKEWSARSLRICFLLMPWQDGIEITDELMKAVVSWEDKLNNFFLKSLDIW 467

Query: 338 PQTSTS----KGIIDPAVLSALY-----------NDLNTVSAIQALHKLARESTKNHDLL 382
             T T+     GI D  +L+AL            +  NT + ++ L  L  ES       
Sbjct: 468 KSTKTATMQEPGIADQQLLNALDKAKADVDTALCDSFNTPAVMRILSDLVTESNSETPSD 527

Query: 383 PIFNASAH-------ILGIEVCKEHLN 402
                 A        I G++   +  N
Sbjct: 528 QTVILLARWVTCIVTIFGLDPEGDLNN 554



 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
            ++KIYN+L R   +F  +DP+   +  Y CGPTVY+ AH+G+A+  +  D++ R+++ Y
Sbjct: 23  PRLKIYNSLTRTKNDFIPLDPTGKVVTWYGCGPTVYEDAHLGHAKNYVSTDIIRRIMQDY 82

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
           +G + +           +    A      +P + +         + + +         P+
Sbjct: 83  FGFRRLG--ERFAFGRGQSRNPALHWQEPLPSDTSPETFAEAVAKAYKE-----QVEPPS 135

Query: 121 HQPRAT 126
               AT
Sbjct: 136 RPDGAT 141


>gi|134081832|emb|CAK42087.1| unnamed protein product [Aspergillus niger]
          Length = 729

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 106/432 (24%), Positives = 163/432 (37%), Gaps = 75/432 (17%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
           +  + +T K    F++D   L  L P    R T +  Q+   ++ I+ +   Y  ++  +
Sbjct: 209 EIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRVTEYGQQIADFVEKIVANKFGYVTSDGSV 268

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTR---------VPEKYHKKNPADFILWKRSTPMEPG 203
            FD  +    G+   R ++      +         +     KK+  DF LWK S P EP 
Sbjct: 269 YFDIKAFEEAGNHYAR-LEPWNRNNQPLLRDGEGALSRATEKKSSDDFALWKASRPGEPS 327

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE--KT 261
           W S WG+GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+AQS         + 
Sbjct: 328 WSSKWGQGRPGWHIECSAMASSCLGSQIDIHSGGIDLAFPHHDNELAQSEAYWCEHKQQW 387

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L+++G KMSKS  NF T+ + LE        +    +R+  L+  +R+ ++
Sbjct: 388 VNYFLHMGHLSIQGSKMSKSLKNFTTVKDALERGD-----YTPRSLRIVFLLGGWRDGVE 442

Query: 322 FTVQRLTEAEILLSKWPQ------------------------TSTSKGIIDPAVLSALYN 357
            T   +  A     K                            S +       V     +
Sbjct: 443 ITDDLIKNASSWEEKLNNFFVKAKDPSSFRSSDEAPTSSSETLSQALKSTQEKVHEYFCD 502

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFN---------------------ASAHILGIEV 396
             +T   + A+ +L                                    AS+   GI  
Sbjct: 503 SFDTPKVMAAISELVTTFNALDSQTLDLKVVESMGTWVTQIVTIFGLNGAASSDSCGIGW 562

Query: 397 CKEHLNKNISIAIEKLVQERLILLKM----------KK-FSSADYIRK-QLESKGFILED 444
               + +     +  L   R  L +           K   S  D +R   L + G  LED
Sbjct: 563 EGTDIPEAAKRFLYPLSAMRDTLRQAAILDDTKQASKDILSLCDRLRNVDLFNLGIYLED 622

Query: 445 YKNPDNGQRMTR 456
            +N     R   
Sbjct: 623 RENKPALVRPVT 634



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 52/173 (30%), Positives = 79/173 (45%), Gaps = 22/173 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L R  T F  +DP    ++ Y CGPTVYD AH+G+AR  +  D+L R+LR Y
Sbjct: 21  PPLKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDY 80

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR-----LA 115
           + +  V +V NITD+DDKII R RQ+H           +T    +   K  +      L 
Sbjct: 81  F-KFDVEFVMNITDVDDKIILRGRQQHLFNKYIAEHPTVTPDVLETARKAYSAYIKKNLP 139

Query: 116 CLAPTHQP---------RATNHIPQMIYLIQNIILHGHA-----YEANNEIIF 154
            + P  +P           T     +    Q +     A     Y+A  ++  
Sbjct: 140 LVDPDTEPENFVAEAQKTVTATTSAIAEAAQKLAGIDAASSKAFYDAAQDVFC 192


>gi|154312989|ref|XP_001555821.1| hypothetical protein BC1G_05496 [Botryotinia fuckeliana B05.10]
 gi|150849581|gb|EDN24774.1| hypothetical protein BC1G_05496 [Botryotinia fuckeliana B05.10]
          Length = 796

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 103/358 (28%), Positives = 157/358 (43%), Gaps = 59/358 (16%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +T     QF++D   L  + P    R T ++P++   ++ II  G AYE++  + FD ++
Sbjct: 212 VTQYWEDQFMEDMDALNVMRPDVITRVTTYVPKIAIFVKKIIDKGFAYESDGSVYFDIAA 271

Query: 159 IPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
               G+   R          + E+  G+       K+   DF LWK+S   EP W SPWG
Sbjct: 272 FEKAGNPYARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWG 331

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD-----RIEKTANI 264
            GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS            +  N 
Sbjct: 332 EGRPGWHIECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCEHEQGPHEWVNY 391

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G L++ G KMSKS  NF TI + L T       +    +R+  LM  + + ++ + 
Sbjct: 392 FLHMGHLSIAGSKMSKSLKNFQTIRDALTTD------YTPRSMRIVFLMGRWNDGVEISP 445

Query: 325 Q--RLTEA-EILLSKW--------------------------PQTSTSKGIIDPAVLSAL 355
               + +A E  ++ +                          P+  T+       + +AL
Sbjct: 446 DMRLMADAWEATVNNFFVNVKSHIIEGGNSTSIEDLKSLSIHPELQTALDKAQTDLQTAL 505

Query: 356 YNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHILGIEVCKEHLNK 403
               +T  A+  L +L +ES             H L  +      ILGI     + N 
Sbjct: 506 TESFDTPKAMLILQELIKESNVHMGSHKSDLDIHGLEKVARWITKILGIFGLDANANA 563



 Score =  119 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 5/108 (4%)

Query: 4   KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++K++N+L+      F  I+   +  YVCGPTVYD +H+G+AR  +  D++ R+++ Y+G
Sbjct: 3   QLKVHNSLKPGGPVPFVPIEKGKVSWYVCGPTVYDHSHLGHARNYVSTDIIRRIMKDYFG 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQF 107
              + +V NITD+DDKII +AR++               +     + F
Sbjct: 63  -FDLNFVMNITDVDDKIILKARRQKLLELEKSKTYTEPELAKLAAEAF 109


>gi|171682892|ref|XP_001906389.1| hypothetical protein [Podospora anserina S mat+]
 gi|170941405|emb|CAP67056.1| unnamed protein product [Podospora anserina S mat+]
          Length = 843

 Score =  285 bits (729), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 112/381 (29%), Positives = 167/381 (43%), Gaps = 64/381 (16%)

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
           DI    ++   +E          + +T +  + F  D   L  L PT   R T ++PQ++
Sbjct: 223 DILLPYLDSLYKETIDTSDQTIFTDLTQRMEKAFNDDMAALNVLEPTAVTRVTEYVPQIV 282

Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYH 184
             ++ II  G AYEA+  + FD  +    G+   R          + E+  G+       
Sbjct: 283 SFVEQIIQKGFAYEADGSVYFDIGAFEKAGNTYARLRPESRNDKALQEEGEGSLSKSSGG 342

Query: 185 -KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            KK  ADF LWKRS P EP W SPWG+GRPGWHIECS M+S  LG   DIH GG+DL FP
Sbjct: 343 QKKRDADFALWKRSKPGEPYWPSPWGQGRPGWHIECSVMASDKLGDNMDIHSGGIDLAFP 402

Query: 244 HHENEIAQSC-----CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           HH+NE+AQS      C        N ++H G L++ G KMSKS  NF TI + L T    
Sbjct: 403 HHDNELAQSEAFFHQCGKGEHTWVNYFLHMGHLSIAGSKMSKSLKNFQTIQDALAT---- 458

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILLSK-WPQTSTSKGIIDP----- 349
             ++ A  +R+  LM  + + ++ +     +A   E  +   +         +D      
Sbjct: 459 --TYTARNMRIVFLMGRWNDGVEISGDMRKQADNWENTVDNFFTNIKAKLAEVDAPTDGV 516

Query: 350 ---------------------AVLSALYNDLNTVSAIQALHKLAREST-------KNHDL 381
                                 + +AL N  +T  A+Q + +L R +        K+ +L
Sbjct: 517 KYLSLTGAGNSLIEDLEQAKKDLDAALRNSFDTPGAMQVILRLVRNANIYMNDKAKSSNL 576

Query: 382 LPI------FNASAHILGIEV 396
            P+            I G++ 
Sbjct: 577 QPVEAVARWVTKIVGIFGLDA 597



 Score =  106 bits (265), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 4   KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            I ++N+L+      F       I  Y CGPT YD +H+G+AR  +  D++ R+ + Y+G
Sbjct: 38  SITVHNSLKPGPPVPFVPKTDGKISWYACGPTTYDLSHLGHARNYLSNDIIRRIFQDYFG 97

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQF 107
            + V +V N TD+DDKII +AR++       +       +    ++ F
Sbjct: 98  YE-VNFVMNYTDVDDKIIIKARRQRLLDLEKEKSYTPEQLRELVSKAF 144


>gi|159126589|gb|EDP51705.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 808

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 106/373 (28%), Positives = 169/373 (45%), Gaps = 51/373 (13%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  N  D+    ++  +    +   +   + +T K  ++F+KD   L  L P    R T 
Sbjct: 216 FYTNAQDLLLPYLDSLKASSINADDHSIFTKLTKKYEERFMKDMRDLNVLDPDELTRVTE 275

Query: 128 HIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYG---------SFSRRKIDEQKMGT 177
           +  ++   ++ I+ +   Y  +   + FD ++  N G         S S  K+  +  G 
Sbjct: 276 YGAEIADFVEKIVENKFGYVTDDGSVYFDITAFENAGHPYARLEPWSRSDNKLVAEGEGA 335

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K++ +DF LWK S P EP W S WGRGRPGWHIECSAM+S  LGK  DIH GG
Sbjct: 336 LTKKTTEKRSASDFALWKASKPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGG 395

Query: 238 LDLIFPHHENEIAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +DL FPHH+NE+AQS           ++  N ++H G L+++G KMSKS  NF TI E L
Sbjct: 396 VDLAFPHHDNELAQSEAYWSHGHPHTDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREAL 455

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------- 338
           E      + W    +R+  L+  +R+ ++ T + ++       K                
Sbjct: 456 ER-----KEWTPRSLRIVFLLGGWRDGVEITEELVSAGNSWEDKVNNFFIKMKDPATLSG 510

Query: 339 QTSTSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTKN----------HDL 381
           QTS S   +  A+ +A       L +  NT  A+ A+ +L  +                +
Sbjct: 511 QTSGSDTTLPAALEAAKKATFDHLCDSFNTQGAMSAISELISKYNSADKSTLNPKDVEAV 570

Query: 382 LPIFNASAHILGI 394
                +  +I G+
Sbjct: 571 ARWVTSMVNIFGL 583



 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 3/102 (2%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R    F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 24  PPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +    V ++ NITD+DDKII RARQ+H       A   IT++
Sbjct: 84  F-HFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTITAE 124


>gi|70997892|ref|XP_753678.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66851314|gb|EAL91640.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 808

 Score =  284 bits (728), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 106/373 (28%), Positives = 169/373 (45%), Gaps = 51/373 (13%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  N  D+    ++  +    +   +   + +T K  ++F+KD   L  L P    R T 
Sbjct: 216 FYTNAQDLLLPYLDSLKASSINADDHSIFTKLTKKYEERFMKDMRDLNVLDPDELTRVTE 275

Query: 128 HIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYG---------SFSRRKIDEQKMGT 177
           +  ++   ++ I+ +   Y  +   + FD ++  N G         S S  K+  +  G 
Sbjct: 276 YGAEIADFVEKIVENKFGYVTDDGSVYFDITAFENAGHPYARLEPWSRSDNKLVAEGEGA 335

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K++ +DF LWK S P EP W S WGRGRPGWHIECSAM+S  LGK  DIH GG
Sbjct: 336 LTKKTTEKRSASDFALWKASKPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGG 395

Query: 238 LDLIFPHHENEIAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +DL FPHH+NE+AQS           ++  N ++H G L+++G KMSKS  NF TI E L
Sbjct: 396 VDLAFPHHDNELAQSEAYWSHGHPHTDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREAL 455

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------- 338
           E      + W    +R+  L+  +R+ ++ T + ++       K                
Sbjct: 456 ER-----KEWTPRSLRIVFLLGGWRDGVEITEELVSAGNSWEDKVNNFFIKMKDPATLSG 510

Query: 339 QTSTSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTKN----------HDL 381
           QTS S   +  A+ +A       L +  NT  A+ A+ +L  +                +
Sbjct: 511 QTSGSDTTLPAALEAAKKATFDHLCDSFNTQGAMSAISELISKYNSADKSTLNPKDVEAV 570

Query: 382 LPIFNASAHILGI 394
                +  +I G+
Sbjct: 571 ARWVTSMVNIFGL 583



 Score =  132 bits (332), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 44/102 (43%), Positives = 62/102 (60%), Gaps = 3/102 (2%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R    F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 24  PPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +    V ++ NITD+DDKII RARQ+H       A   IT++
Sbjct: 84  F-HFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTITAE 124


>gi|119479397|ref|XP_001259727.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119407881|gb|EAW17830.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 808

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 106/373 (28%), Positives = 169/373 (45%), Gaps = 51/373 (13%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  N  D+    ++  +    +   +   + +T K  ++F+KD   L  L P    R T 
Sbjct: 216 FYTNAQDLLLPYLDSLKASSINADDHSIFTKLTKKYEERFMKDMRDLNVLDPDELTRVTE 275

Query: 128 HIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYG---------SFSRRKIDEQKMGT 177
           +  ++   ++ I+ +   Y  +   + FD ++  N G         S S  K+  +  G 
Sbjct: 276 YGAEIADFVEKIVENKFGYVTDDGSVYFDITAFENAGHPYARLEPWSRSDNKLLAEGEGA 335

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K++ +DF LWK S P EP W S WGRGRPGWHIECSAM+S  LGK  DIH GG
Sbjct: 336 LTKKTTEKRSASDFALWKASKPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGG 395

Query: 238 LDLIFPHHENEIAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +DL FPHH+NE+AQS           ++  N ++H G L+++G KMSKS  NF TI E L
Sbjct: 396 VDLAFPHHDNELAQSEAYWTHGHSHTDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREAL 455

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------- 338
           E      + W    +R+  L+  +R+ ++ T + ++       K                
Sbjct: 456 ER-----KEWTPRSLRIVFLLGGWRDGVEITEELVSAGNSWEDKVNNFFIKMKDPATLSG 510

Query: 339 QTSTSKGIIDPAVLSA-------LYNDLNTVSAIQALHKLARESTKN----------HDL 381
           QTS S   +  A+ +A       L +  NT  A+ A+ +L  +                +
Sbjct: 511 QTSGSDTTLPAALEAAKKATFDHLCDSFNTQGAMSAISELISKYNGADKSTLNPKDVEAV 570

Query: 382 LPIFNASAHILGI 394
                +  +I G+
Sbjct: 571 ARWVTSMVNIFGL 583



 Score =  131 bits (331), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 43/102 (42%), Positives = 61/102 (59%), Gaps = 3/102 (2%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R    F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 24  PPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +    V ++ NITD+DDKII RARQ+H       A   I ++
Sbjct: 84  F-HFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTIAAE 124


>gi|67903626|ref|XP_682069.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
 gi|40741403|gb|EAA60593.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
          Length = 838

 Score =  283 bits (725), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 162/371 (43%), Gaps = 48/371 (12%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +  +  D+    ++           +   + +T K  ++F+KD   L  L P    R T
Sbjct: 250 RFYTDAQDLLLPYLDALEGSLIDADDHSIFTKLTRKYEERFMKDMDDLNVLRPDELTRVT 309

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG---------SFSRRKIDEQKMG 176
            +  ++   ++ I+ +   Y  A+  + FD ++    G         S S  K+  +  G
Sbjct: 310 EYGQEIADFVEKIVENKFGYVSADGSVYFDINAFEAAGFPYARLEPWSRSDNKLLAEGEG 369

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           +   +   K++ +DF LWK S P EP W S WGRGRPGWHIECSAM+S  LGK  DIH G
Sbjct: 370 SLANKTTEKRSKSDFALWKSSKPGEPSWSSSWGRGRPGWHIECSAMASARLGKHMDIHSG 429

Query: 237 GLDLIFPHHENEIAQSCCAD--RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           G+DL FPHH+NE+AQS        ++  N ++H G L+++G KMSKS  NF TI E LE 
Sbjct: 430 GIDLAFPHHDNELAQSEAYWHSHGDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER 489

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------- 339
                + W    +R+  L+  +++ I+ T + ++       K                  
Sbjct: 490 -----KEWTPRSLRIVFLLGGWKDGIEITDELVSAGNSWEDKLNNFFIRVKDPAARQGPA 544

Query: 340 ------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLP 383
                  + +      AV   L +  NT   + ++ +L  +                +  
Sbjct: 545 SSTDTTLAEALEAAKSAVHEQLCDSFNTPGMMNSISELITKYNIADKSTLNPKDVEAVAR 604

Query: 384 IFNASAHILGI 394
                 ++LG+
Sbjct: 605 WVTYMVNVLGL 615



 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 8/118 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K+YN+L +  T F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 55  PSLKVYNSLTKSKTPFIPIDPHGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 114

Query: 61  YGEKCVTYVRNITDIDD-----KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           + +  V +V NITD+DD     +II RARQ+H       A   +  +      K    
Sbjct: 115 F-KFNVHFVMNITDVDDKVNGVQIILRARQQHLFTKFVTAHPTVDEEVLDVAKKAYAA 171


>gi|322706523|gb|EFY98103.1| cysteinyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 799

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 103/376 (27%), Positives = 156/376 (41%), Gaps = 63/376 (16%)

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
             ++   +E          + +T +    F++D   L  L P    R T ++PQ+   ++
Sbjct: 191 PYLDSLHKETMDTSDQSIFTDLTKRMEAVFLEDMDNLNVLRPDVITRVTEYVPQIAKFVE 250

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNP 188
            I+  G AYEA   + FD ++    G+   R          + E+  G+       K+  
Sbjct: 251 QIVDKGFAYEAEGSVYFDIAAFQKAGNTYARLRPDSKNNKALQEEGEGSLSTNLGGKRGA 310

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            DF LWK+S   EP W S WG GRPGWHIECS M+S  LG   D+H GG+DL FPHH+NE
Sbjct: 311 GDFALWKKSKAGEPYWPSKWGDGRPGWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNE 370

Query: 249 IAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           +AQS               N ++H G L++ G KMSKS  NF TI + L T      ++ 
Sbjct: 371 LAQSEAYFCQHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTIADALAT------TYT 424

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKW----------------------- 337
           A  +R+  LM  + + ++ +    + A   E  +S +                       
Sbjct: 425 ARSMRIVFLMGRWNDGVEISPDMRSTADNWETTISNFFTNTKSWIREAGVGGGVRSLSIN 484

Query: 338 -----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI-- 384
                        +    V +AL N  +T  A+ AL KL           K+ DL  +  
Sbjct: 485 QDTPATGLLADLELAKKEVEAALTNSFDTPRAMLALLKLVNNVNTFVMNNKDVDLAHVEA 544

Query: 385 ----FNASAHILGIEV 396
                     I G++ 
Sbjct: 545 IARWITKMVGIFGLDP 560



 Score =  116 bits (291), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 2/85 (2%)

Query: 3  KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            IK++N+L+      F  ++P  +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+
Sbjct: 2  NSIKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVTSDIIRRIMMHYF 61

Query: 62 GEKCVTYVRNITDIDDKIIERARQE 86
          G   V YV N+TD+DDKII +AR++
Sbjct: 62 GFN-VKYVMNMTDVDDKIIIKARRQ 85


>gi|320034216|gb|EFW16161.1| cysteinyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 805

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 102/356 (28%), Positives = 154/356 (43%), Gaps = 50/356 (14%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIF 154
            + ++ +   +F++D   L  L      R T  IP+++  ++ I+ HG AY  A+  + F
Sbjct: 240 FTQLSQRFEDRFMEDARVLNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYF 299

Query: 155 DTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           D ++    G+   R          +     G  + +   K++ ADF LWK S   EP W 
Sbjct: 300 DIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWKASKAGEPSWP 359

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
           SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS          ++ 
Sbjct: 360 SPWGLGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW 419

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L+++G KMSKS  NF TI E LE        W    +R+  LM ++ + I+
Sbjct: 420 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGNWADGIE 474

Query: 322 FTVQRLTEAEILLSKW---------------------PQTSTSKGIIDPAVLSALYNDLN 360
            T   +        K                         +        AV  +L +  N
Sbjct: 475 ITEDLVKAGNAWEEKLNNFFLSVRNLAAENELSSSTDDALALQLKSAQKAVHDSLCDSFN 534

Query: 361 TVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNIS 406
           T  A+ A+  L                  D+     +  +I G+       ++ I 
Sbjct: 535 TAGAMIAISGLVTHYNSADKSKLNAQDVQDVAKWVTSMVNIFGLNGSATPASEEIG 590



 Score =  134 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 50/136 (36%), Positives = 70/136 (51%), Gaps = 12/136 (8%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L R    F  +DP  + +  Y CGPTVYD AH+G+AR  +  D+L RLLR Y
Sbjct: 24  PPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI--------SIITSKNTQQFVKDTT 112
           + +  V ++ NITD+DDKII RARQ+H  +    +           ITS       K+  
Sbjct: 84  F-KFDVKFIMNITDVDDKIITRARQQHLFMEYVTSHPTIDDSVVETITSAYESYVRKNLP 142

Query: 113 RL-ACLAPTHQPRATN 127
            L     P   P A  
Sbjct: 143 LLEHVPTPKAFPEAVE 158


>gi|168008202|ref|XP_001756796.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692034|gb|EDQ78393.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 811

 Score =  283 bits (725), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 107/387 (27%), Positives = 171/387 (44%), Gaps = 33/387 (8%)

Query: 58  RYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
           R   G++ +  +   +  D    +   +   ++  +      T K   +F  D T L C 
Sbjct: 180 RKLGGKEGINMLLGGSAADSLASQLDARLGATVTDHAIYKSHTLKYENEFWDDMTALGCG 239

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----PNYGSFSRRKIDEQ 173
            P    R T ++ ++I  ++ ++ +  AY AN  + FDT +       YG  +   +   
Sbjct: 240 YPDVLVRVTEYMDKIIEYVEVVLANKFAYVANGSVYFDTKAFREAGHQYGKLNPAAVGSS 299

Query: 174 KMGTRVP---EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
            + +      E   K+   DF LWK+S P EP WESPWG GRPGWHIECSAM+S  LG  
Sbjct: 300 LLASESESNFETSEKRTSCDFALWKKSKPGEPAWESPWGLGRPGWHIECSAMASDILGDN 359

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            DIH GG DL FPHH+NE+AQS       +    + H+G L+++G KMSKS  NFITI E
Sbjct: 360 MDIHSGGHDLQFPHHDNELAQSEAYFHCHEWVRYFFHSGHLSIDGLKMSKSLKNFITIKE 419

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
            L         + A  +R+  ++  + + I+F+   + EA     ++     +       
Sbjct: 420 ALT-------KYTARQLRMLFVIQSWDKSINFSTTVVNEALQKEKQFKNFFANVESYLRQ 472

Query: 351 VLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHIL-------GIEVCKEHL 401
            + AL        +  +  L  L+R++     L   F    ++L       GI+   +  
Sbjct: 473 HVRAL------PGSAELDFLLSLSRKTLVTESLC--FYVVGYLLWHALPMAGIQRPGDDE 524

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSA 428
            +  S   +  +  R        F +A
Sbjct: 525 KQLFSRVDQAQIMVRE--RLEDNFDTA 549



 Score =  116 bits (291), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 2/92 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           K+ + + N+L ++   F   D S  +  Y+CGPTVYD +H+G+AR  + FD++ R+L  Y
Sbjct: 13  KRGLMVNNSLCKEKVPFFTKDGSRNVTWYICGPTVYDSSHVGHARNYVTFDIIRRILEDY 72

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           +    V YV N+TD+DDKII RAR+ +     
Sbjct: 73  FHYN-VKYVMNVTDVDDKIINRARRNYLMDQY 103


>gi|259482994|tpe|CBF77996.1| TPA: cysteinyl-tRNA synthetase (AFU_orthologue; AFUA_5G09610)
           [Aspergillus nidulans FGSC A4]
          Length = 833

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 99/371 (26%), Positives = 162/371 (43%), Gaps = 48/371 (12%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +  +  D+    ++           +   + +T K  ++F+KD   L  L P    R T
Sbjct: 245 RFYTDAQDLLLPYLDALEGSLIDADDHSIFTKLTRKYEERFMKDMDDLNVLRPDELTRVT 304

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG---------SFSRRKIDEQKMG 176
            +  ++   ++ I+ +   Y  A+  + FD ++    G         S S  K+  +  G
Sbjct: 305 EYGQEIADFVEKIVENKFGYVSADGSVYFDINAFEAAGFPYARLEPWSRSDNKLLAEGEG 364

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           +   +   K++ +DF LWK S P EP W S WGRGRPGWHIECSAM+S  LGK  DIH G
Sbjct: 365 SLANKTTEKRSKSDFALWKSSKPGEPSWSSSWGRGRPGWHIECSAMASARLGKHMDIHSG 424

Query: 237 GLDLIFPHHENEIAQSCCAD--RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           G+DL FPHH+NE+AQS        ++  N ++H G L+++G KMSKS  NF TI E LE 
Sbjct: 425 GIDLAFPHHDNELAQSEAYWHSHGDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER 484

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------- 339
                + W    +R+  L+  +++ I+ T + ++       K                  
Sbjct: 485 -----KEWTPRSLRIVFLLGGWKDGIEITDELVSAGNSWEDKLNNFFIRVKDPAARQGPA 539

Query: 340 ------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLP 383
                  + +      AV   L +  NT   + ++ +L  +                +  
Sbjct: 540 SSTDTTLAEALEAAKSAVHEQLCDSFNTPGMMNSISELITKYNIADKSTLNPKDVEAVAR 599

Query: 384 IFNASAHILGI 394
                 ++LG+
Sbjct: 600 WVTYMVNVLGL 610



 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 3/113 (2%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K+YN+L +  T F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 55  PSLKVYNSLTKSKTPFIPIDPHGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 114

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           + +  V +V NITD+DDKII RARQ+H       A   +  +      K    
Sbjct: 115 F-KFNVHFVMNITDVDDKIILRARQQHLFTKFVTAHPTVDEEVLDVAKKAYAA 166


>gi|327354912|gb|EGE83769.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 844

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 164/370 (44%), Gaps = 54/370 (14%)

Query: 74  DIDDKIIERARQEHPSIPINDA---ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +     + +  K   +F++D   L  L P    R T ++P
Sbjct: 250 DVKDVLLEYLDSVHGSSIRGEDRLIFTKLAKKYETRFMQDVRDLNVLDPDAITRVTEYMP 309

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVP 180
           +++  ++ II H   Y  ++  + FD ++    G+   R         K+  +  G    
Sbjct: 310 EIVSFVERIIDHKFGYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEGALTK 369

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 370 KTTEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 429

Query: 241 IFPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            FPHH+NE+AQS              N ++H G L+++G KMSKS  NF TI E L+   
Sbjct: 430 AFPHHDNELAQSEAYWHETCADHHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD 489

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE--------------AEILL-------- 334
                W    +R+  L+  +++ I+ T   +                A+  +        
Sbjct: 490 -----WTPRSLRIVFLLGGWKDGIEITEDLVKAGNAWEEKTNNFFIKAKDAVAQQDVTPG 544

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
           SK    + +      AV  +L +  NT  A+ A+ +L  +               +    
Sbjct: 545 SKENTFAVALKSAQDAVHQSLCDSFNTAGAMYAISELISKYNIADKSTLAIKDVQEAATW 604

Query: 385 FNASAHILGI 394
             +  +I G+
Sbjct: 605 VTSMVNIFGL 614



 Score =  129 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 3/105 (2%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 59  PPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDY 118

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQ 105
           + +  V ++ NITD+DDKII R RQ+H       +   +  K  +
Sbjct: 119 F-KFDVKFIMNITDVDDKIISRGRQQHFFTEFVYSHPTVDDKVIE 162


>gi|159490726|ref|XP_001703324.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158280248|gb|EDP06006.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 665

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 103/324 (31%), Positives = 153/324 (47%), Gaps = 46/324 (14%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +     ++F++D   L C  P    R + +IP++I  +  II +G AY +N  + FDT +
Sbjct: 219 VAPGFAREFLEDMDALGCRRPDVLTRVSEYIPEIIEYVTRIIGNGMAYASNGSVYFDTQN 278

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
                  S     E   G    E   K++P DF LWK + P EP WESPWG GRPGWHIE
Sbjct: 279 F------SAALAAE---GESNFETSEKRSPQDFALWKAAKPGEPAWESPWGVGRPGWHIE 329

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEG 275
           CSAM+S  +G   DIH GG DL FPHH+NE+AQ+         ++  N ++H G L++EG
Sbjct: 330 CSAMASSIIGSRLDIHTGGEDLRFPHHDNELAQAEAYYHHDGCKQWVNYFLHCGHLHIEG 389

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS  NF+TI E L        S+ A  +RL   +  + + + +  Q  TE ++  +
Sbjct: 390 LKMSKSLKNFVTIREALA-------SFNARQLRLMFCLQPWNKTMMYGEQSRTEMKVREA 442

Query: 336 KWPQTSTSKGII---------------------------DPAVLSALYNDLNTVSAIQAL 368
           +      +                                 AV +AL +++NT + + AL
Sbjct: 443 QLRNFFGNVDAAIRNSSVNTNEQRWTTEDFDLNNRILATQAAVDAALRDNINTPAVMDAL 502

Query: 369 HKLARESTKNHDLLPIFNASAHIL 392
             L +   K         A+  +L
Sbjct: 503 SDLIKAVNKYLADKSEPGAARALL 526



 Score =  114 bits (285), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 7/111 (6%)

Query: 2   KKKIKIYNTLERKITEFQAIDP---SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
              + +YN+   +   F          I  Y CGPTVYD AH+G+AR  + FD++ R+L 
Sbjct: 22  TAPLMLYNSFVDEKVPFVPAAGPTSKQITWYACGPTVYDVAHMGHARNYLSFDIVRRVLE 81

Query: 59  YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI---NDAISIITSKNTQQ 106
            Y+G  C+  V N+TD+DDKII RAR+            +   +     + 
Sbjct: 82  DYFGYNCL-MVMNVTDVDDKIILRARRNFLLAQYKSSGKSAEEVKEFTIEA 131


>gi|261202288|ref|XP_002628358.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239590455|gb|EEQ73036.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
          Length = 801

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 164/370 (44%), Gaps = 54/370 (14%)

Query: 74  DIDDKIIERARQEHPSIPINDA---ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +     + +  K   +F++D   L  L P    R T ++P
Sbjct: 207 DVKDVLLEYLDSVHGSSIRGEDRLIFTKLAKKYEARFMQDVRDLNVLDPDAITRVTEYMP 266

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVP 180
           +++  ++ II H   Y  ++  + FD ++    G+   R         K+  +  G    
Sbjct: 267 EIVSFVERIIDHKFGYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEGALTK 326

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 327 KTTEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 386

Query: 241 IFPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            FPHH+NE+AQS              N ++H G L+++G KMSKS  NF TI E L+   
Sbjct: 387 AFPHHDNELAQSEAYWHETCADHHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD 446

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE--------------AEILL-------- 334
                W    +R+  L+  +++ I+ T   +                A+  +        
Sbjct: 447 -----WTPRSLRIVFLLGGWKDGIEITEDLVKAGNAWEEKTNNFFIKAKDAVAQQDVTPG 501

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
           SK    + +      AV  +L +  NT  A+ A+ +L  +               +    
Sbjct: 502 SKENTFAVALKSAQDAVHQSLCDSFNTAGAMYAISELISKYNIADKSTLAIKDVQEAATW 561

Query: 385 FNASAHILGI 394
             +  +I G+
Sbjct: 562 VTSMVNIFGL 571



 Score =  119 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDK 78
           + +  V ++ NITD+DDK
Sbjct: 84  F-KFDVKFIMNITDVDDK 100


>gi|213513600|ref|NP_001133392.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|209153132|gb|ACI33145.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 541

 Score =  283 bits (724), Expect = 5e-74,   Method: Composition-based stats.
 Identities = 108/410 (26%), Positives = 166/410 (40%), Gaps = 85/410 (20%)

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKI 170
            L P    R + + P+++  ++ I+ +G  YE+N  + FDT+         YG      +
Sbjct: 27  VLPPDVLTRVSEYCPEIVDFVKKILDNGFGYESNGSVYFDTAKFDTSQKHAYGKLVPEAV 86

Query: 171 DEQKM--------GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAM 222
            + K              +   K++  DF LWK S P EP W+SPWG+GRPGWHIECSAM
Sbjct: 87  GDMKALQEGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPWGKGRPGWHIECSAM 146

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +   LG+  DIHGGG DL FPHH+NE+AQS      +     ++H G L + G KMSKS 
Sbjct: 147 AGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHTGHLTIAGCKMSKSL 206

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA---EILL----- 334
            NFITI + L           A  +RLA LM  +++ +D++   +  A   E  L     
Sbjct: 207 KNFITIKDALAKN-------TARQLRLAFLMHSWKDTLDYSSNTMESAVHYEKFLNEFFL 259

Query: 335 ----------------SKWPQTSTSKGII----DPAVLSALYNDLNTVSAIQALHKLARE 374
                            KW                 V  AL ++++T S ++ +  L  +
Sbjct: 260 NVKDILRAPCDVTGQFEKWEAAEMELNESFYERKAVVHEALCDNVDTRSTMEEMRALVTQ 319

Query: 375 STK--------------------NHDLLPIFNASAHI-----LGIEVCKEHLNKNISIAI 409
           S                         L  +      I     +G  V  +  + ++   +
Sbjct: 320 SNTYIASRKSSKLQPNRMLMKSIALYLTDMLKTFGAIEGSEPIGFPVGGDGHHVDMETTV 379

Query: 410 EKLVQ--------ERLILLKM---KKFSSADYIR-KQLESKGFILEDYKN 447
              ++         R I  +    +     D +R   L   G  LED++ 
Sbjct: 380 MPYLKVLSDFRESVRKIAREQNVTEVLQLCDVVRNDTLPELGVRLEDHEG 429


>gi|115433550|ref|XP_001216912.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
 gi|114189764|gb|EAU31464.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
          Length = 811

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 100/353 (28%), Positives = 145/353 (41%), Gaps = 54/353 (15%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
           +T K  ++F +D   L  L P    R T ++PQ++  I+ +I  G AY   +  + FD  
Sbjct: 241 LTEKFEKRFFEDMNSLNVLYPDVLTRVTEYVPQVVSFIEKVIASGFAYATPDGSVYFDIE 300

Query: 158 SIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           +    G    R          +     G+   +   K++ +DF LWK S P EP W SPW
Sbjct: 301 AFEKAGHNYARLEPWNRNDKSLLADGEGSLTNKTTVKRSESDFALWKASKPGEPSWPSPW 360

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK---TANIW 265
             GRPGWHIECS M+S  LGK  DIH GG DL FPHH+NE+AQS             N +
Sbjct: 361 APGRPGWHIECSVMASDVLGKAIDIHSGGADLRFPHHDNELAQSEAYWSTGPRVQWVNYF 420

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           IH G L+++G KMSKS  NF TI   L         W +  +R+  L+  +   ++ T  
Sbjct: 421 IHTGHLSIQGMKMSKSLKNFTTIRAALSQG-----QWTSRSLRICFLLGPWEAGVEVTED 475

Query: 326 RLTEAEILLSKW----------------------------PQTSTSKGIIDPAVLSALYN 357
            L        K                              Q   +       + +AL +
Sbjct: 476 LLKTTTSWEGKLNNFFLKSKEIARNQATGNSSSATNTEGDKQLLAALEKAKSDLHAALCD 535

Query: 358 DLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHLN 402
              T  A++A+ +L  E     D        L         I G++   +  +
Sbjct: 536 SFYTPGAMRAISELVSEFNIAKDVSDATVLELARWVTRMVTIFGLDAEGDLND 588



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/87 (50%), Positives = 58/87 (66%), Gaps = 3/87 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP-SNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R+  ++  IDP       Y CGPTVYD AH+G+AR  +  D+L R+L+ Y
Sbjct: 23  PPLKIYNSLTRRKDDYVPIDPEGKATTWYTCGPTVYDDAHMGHARNYVSTDILRRILKDY 82

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEH 87
           +G   V YV NITDIDDKII R RQ++
Sbjct: 83  FG-YQVKYVMNITDIDDKIILRGRQQY 108


>gi|154285550|ref|XP_001543570.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
 gi|150407211|gb|EDN02752.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
          Length = 665

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 103/370 (27%), Positives = 163/370 (44%), Gaps = 54/370 (14%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  +I   +T K   +F++D   L  L P    R T ++P
Sbjct: 188 DVQDVLLEYLDSIHGSSIRGEDRTIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 247

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD  +    G+   R         K+  +  G    
Sbjct: 248 EIVSFVERIVKHRFGYVTSDGSVYFDIGAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 307

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 308 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 367

Query: 241 IFPHHENEIAQSCCADR----IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            FPHH+NE+AQS          +   N ++H G L+++G KMSKS  NF TI E L+   
Sbjct: 368 AFPHHDNELAQSEAYWHETCAHDHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD 427

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
                W    +R+  L++ +++ I+ T   +        K                    
Sbjct: 428 -----WTPRSLRIVFLLSAWKDGIEITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPG 482

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
                 + +      AV  +L +  NT  A+ A+ +L  +               +    
Sbjct: 483 SADNTLAVALKSAQDAVHQSLCDSFNTAGAMYAISELISKYNIADKSTIPTKHIQEAAMW 542

Query: 385 FNASAHILGI 394
             +  ++ G+
Sbjct: 543 VTSMVNVFGL 552



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 3/83 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERA 83
           + +  V ++ NITD+DDKI+  A
Sbjct: 84  F-KFDVEFIMNITDVDDKIVRSA 105


>gi|328849314|gb|EGF98497.1| hypothetical protein MELLADRAFT_46041 [Melampsora larici-populina
           98AG31]
          Length = 791

 Score =  282 bits (722), Expect = 7e-74,   Method: Composition-based stats.
 Identities = 115/445 (25%), Positives = 179/445 (40%), Gaps = 99/445 (22%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              + +K    F +D   L    PT   R +++IPQ+   I  I+ +G+AYE+N  I FD
Sbjct: 234 FKSLATKWEHSFFEDMKSLNVEPPTVLTRVSDYIPQIESFISQIMENGYAYESNGSIYFD 293

Query: 156 TSSI------------PNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
             +               Y   S       K+ ++  G        K++ ADF LWKRS 
Sbjct: 294 VLAFDHSTLRSDPSLHHTYAKLSPSSKTNLKLIKEGEGGLSSLMDSKRSTADFALWKRSK 353

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
             EP WES WG+GRPGWHIECS M+S  LG   DIH GG+DL+FPHH+NE+AQS      
Sbjct: 354 AGEPEWESRWGKGRPGWHIECSVMASEVLGNGMDIHSGGVDLMFPHHDNELAQSEAYHDC 413

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
            +  N ++H G L++EG KMSKS  NFITI + L       +   A  +R++ +   +  
Sbjct: 414 HQWVNYFLHTGHLHIEGLKMSKSLKNFITIQDAL-------KRHSARQLRISFIGQRWDL 466

Query: 319 PIDFTVQRLTEAEILLSKW-----------PQTSTSKGIIDPA----------------- 350
            +DF    ++E +   S              ++    G +                    
Sbjct: 467 GMDFAESSMSEVKNQESSLINFFAVLKALKYESENEDGSVVNEKVDEKDELYVHLKSSLE 526

Query: 351 -----VLSALYNDLNTVSAIQALHKLARESTK-----------------NHDLLPIFNAS 388
                V  +  +  NT  A + L  L   + K                   ++       
Sbjct: 527 EAKVQVHQSFCDSYNTPEAFRHLLSLINITNKVISSQVSWIRSGKGNLIVEEIGLWITEI 586

Query: 389 AHILGI----------------EVCKEHLNKNISIAIE-----KLVQE--RLILLKMKK- 424
             + G+                ++ +E   + + + I+       +++  R  L K K  
Sbjct: 587 LGVFGLVESEGRDGFKKSLVGWDLVEESEERIVKVLIDWSKFRDQIRKLSRDELKKSKSV 646

Query: 425 FSSADYIRK-QLESKGFILEDYKNP 448
            S  D +R  +L   G  L+D  + 
Sbjct: 647 LSLCDKLRDSELIGVGVALDDQDDG 671



 Score =  130 bits (328), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 41/96 (42%), Positives = 59/96 (61%), Gaps = 1/96 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           K +K+YN+L +  T+F    P  I  Y CGPTVYD +H+G+AR  +  D+L R+ R Y+ 
Sbjct: 13  KGLKLYNSLTKSKTDFIPRIPGKISWYNCGPTVYDASHMGHARNYVAQDILRRITRDYF- 71

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           +  + +V NITDIDDKII+RAR+E        +   
Sbjct: 72  KYEINFVMNITDIDDKIIKRAREEELLNRFMKSTKT 107


>gi|322694236|gb|EFY86071.1| cysteinyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 799

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 101/375 (26%), Positives = 158/375 (42%), Gaps = 63/375 (16%)

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
             ++   +E          + +T +    F++D   L  L P    R T ++PQ+   ++
Sbjct: 191 PYLDSLHKETIDTSDQSIFTDLTKRMEAVFLEDMDNLNVLRPDVITRVTEYMPQIAKFVE 250

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNP 188
            I+  G AYEA   + FD ++    G+   R          + E+  G+       K+  
Sbjct: 251 QIVDKGFAYEAEGSVYFDIAAFQKAGNTYARLRPDSKNDKALQEEGEGSLSTNLGGKRGA 310

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            DF LWK+S   EP W S WG GRPGWHIECS M+S  LG   D+H GG+DL FPHH+NE
Sbjct: 311 GDFALWKKSKAGEPYWPSKWGDGRPGWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNE 370

Query: 249 IAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           +AQS               N ++H G L++ G KMSKS  NF TI++ L T      ++ 
Sbjct: 371 LAQSEAYFCQHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTISDALAT------TYT 424

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEA---EILLSKWPQTS------------------- 341
           A  +R+  LM  + + ++ +    ++A   E  +S +   +                   
Sbjct: 425 ARSMRIVFLMGRWNDGVEISPDMRSKADNWETTISNFFTNAKSWIREAGVGGGVKSLSIN 484

Query: 342 ---------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI-- 384
                        +    V +AL N  +T  A+  L KL           K+ DL  +  
Sbjct: 485 QDTPATGLLADLELAKKEVEAALTNSFDTPRAMLVLLKLVNTVNTFVMNNKDVDLAHVEA 544

Query: 385 ----FNASAHILGIE 395
                     + G++
Sbjct: 545 IARWITKMVGVFGLD 559



 Score =  116 bits (291), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 2/84 (2%)

Query: 4  KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +K++N+L+      F  ++P  +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+G
Sbjct: 3  SLKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVASDIIRRIMMHYFG 62

Query: 63 EKCVTYVRNITDIDDKIIERARQE 86
             V YV N+TD+DDKII +AR++
Sbjct: 63 FN-VKYVMNMTDVDDKIIIKARRQ 85


>gi|116751465|ref|YP_848152.1| cysteinyl-tRNA synthetase, class Ia [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700529|gb|ABK19717.1| cysteinyl-tRNA synthetase, class Ia [Syntrophobacter fumaroxidans
           MPOB]
          Length = 418

 Score =  282 bits (722), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 103/397 (25%), Positives = 182/397 (45%), Gaps = 42/397 (10%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNT+ R+   F+  +   ++M+ CGP++Y   H+GN R  +  DVL R L +     
Sbjct: 2   LQLYNTMSRRKERFEPRNEGAVKMFSCGPSIYGRPHVGNYRSFLWEDVLQRYLEHLGF-- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V    ++TD++DK I  A++          +  +T +NT+ F ++   L    P+  PR
Sbjct: 60  TVERALSLTDVEDKAISEAQK------AGTTVLELTDRNTRLFFEEAGALRIKLPSLVPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
           ++  + Q + LI  ++  G AY    ++ FD   +  +G   R  + +     R  ++  
Sbjct: 114 SSTTVEQAVRLILLLLSKGIAYWHEGDVFFDPLQVKGFGRLFRLDMSKWPKAKRRFKQDT 173

Query: 184 ---HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
               + N  DF+LW      +P  W++P G+GRP W+I+  AM + +LG   DI  GG+D
Sbjct: 174 YPGRRWNLGDFVLWHGYRQGDPLYWDTPIGKGRPAWNIQDPAMITRHLGYTIDIACGGVD 233

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            ++ HH+  +A        E  +  WIH   L ++G+KMSKS GN +   +LL+      
Sbjct: 234 NLYRHHDYNLAVIEAISGEE-FSRYWIHGEHLLVDGKKMSKSVGNILYPEDLLKEGAEHR 292

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
                  IR  ++  ++R+ I+ T+ R       L    +                    
Sbjct: 293 H------IRFYLIYGNHRKTINLTMDRFKTLSRKLDDLTEVLGEIGCTGEAGGTAPDKSP 346

Query: 341 STSKGIID---PAVLSALYNDLNTVSAIQALHKLARE 374
             +K ++D   P     + +DLN   A   L+K  +E
Sbjct: 347 GAAKKLVDGLLPGFEKHMNDDLNVKGAFDFLYKSLQE 383


>gi|258652760|ref|YP_003201916.1| cysteine--tRNA ligase [Nakamurella multipartita DSM 44233]
 gi|258555985|gb|ACV78927.1| Cysteine--tRNA ligase [Nakamurella multipartita DSM 44233]
          Length = 392

 Score =  282 bits (722), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 107/346 (30%), Positives = 155/346 (44%), Gaps = 19/346 (5%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
            RMYVCG T YD  H+G+A   +  D    +LR           RN+TD+DD +   A  
Sbjct: 43  ARMYVCGITPYDVTHLGHAATFVWADAAQAVLRSIG--VHTVSCRNVTDVDDVLTAAADA 100

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                                F +D   L    PTH PRA + +PQ+  L   ++  GHA
Sbjct: 101 HGRH------YDEHAVYQEFLFEQDMAALRVARPTHTPRARHFVPQVRQLAAALLATGHA 154

Query: 146 YEANNEIIFDTSSIPNYGSFSR-RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           Y+ +  + F           S    ++        PE   +++P D  +W+ ST  +P W
Sbjct: 155 YQRDGSVYFRGRGAVAAAGLSGDLAVELSAEFGDAPEDPAREDPFDVPVWRPSTDRDPAW 214

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            SPWG GRPGWH EC+AMS   LG   D+  GG DL+FPHH  + A    A  +   A  
Sbjct: 215 PSPWGWGRPGWHAECAAMSMATLGAGVDVLIGGQDLVFPHHAYQAALVQAASGVAPFARR 274

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
            +H G ++ +GRKM+KS GN + I++LL       RS P   +R+ +L   +    ++  
Sbjct: 275 AMHVGAVHYQGRKMAKSTGNLVLISDLL-------RSCPPAAVRMLLLNRPWGSGWEYHE 327

Query: 325 QRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYNDLNTVSAIQA 367
             L  A   L      +           AV +AL NDL+  +A+  
Sbjct: 328 ADLEAASADLEALYVAAGRPNRSAGAAEAVTAALLNDLDVPAAVAV 373


>gi|238504958|ref|XP_002383708.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220689822|gb|EED46172.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 874

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 99/357 (27%), Positives = 155/357 (43%), Gaps = 51/357 (14%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIF 154
            + +T +  ++F+KD   L  L P    R T +  ++   ++ I+ +   Y  +   + F
Sbjct: 310 FTKLTKRYEERFLKDMRDLNVLDPNEITRVTEYGAEIADFVEKIVKNNFGYVTDDGSVYF 369

Query: 155 DTSSIPNYGS---------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           D  +    G           S  K+  +  G+   +   K++ +DF LWK S P EP W 
Sbjct: 370 DIEAFEAAGHPYARLEPWNRSDSKLLAEGEGSLTKKATDKRSASDFALWKASKPGEPSWA 429

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD-------RI 258
           S WGRGRPGWHIECSAM+S  LGK  DIH GG+DL FPHH+NE+AQS             
Sbjct: 430 SSWGRGRPGWHIECSAMASARLGKQLDIHSGGVDLAFPHHDNELAQSEAYWADSHNHSHD 489

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E+  N + H G L+++G KMSKS  NF TI E LE      + W    +R+  L+  +++
Sbjct: 490 EQWVNYFFHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLRIVFLLGGWKD 544

Query: 319 PIDFTVQRLTEAEILLSKWPQ-------------------TSTSKGIIDPAVLSALYNDL 359
            ++ T   ++       K                       +T+      AV   L +  
Sbjct: 545 GVEITDDLVSAGSSWEEKVNNFFIKVKDPAALQGSGTDDTLATALADAQKAVYEHLCDSF 604

Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNIS 406
           NT  A+ A+ +L  +                +     +  +I G+       ++ I 
Sbjct: 605 NTPGAMYAISELITKYNSADKSAVNPKDVEAVARWVTSMVNIFGLNGKAAADSQEIG 661



 Score =  124 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/99 (40%), Positives = 57/99 (57%), Gaps = 3/99 (3%)

Query: 3   KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L R    F  ID     +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 92  PPLKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 151

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           + +  V +V NITD+DDKII R RQ+H           I
Sbjct: 152 F-KFDVNFVMNITDVDDKIILRGRQQHLFTEFTSEHPTI 189


>gi|239612172|gb|EEQ89159.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 801

 Score =  282 bits (721), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 164/370 (44%), Gaps = 54/370 (14%)

Query: 74  DIDDKIIERARQEHPSIPINDA---ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +     + +  K   +F++D   L  L P    R T ++P
Sbjct: 207 DVKDVLLEYLDSVHGSSIRGEDRLIFTKLAKKYETRFMQDVRDLNVLDPDAITRVTEYMP 266

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVP 180
           +++  ++ II H   Y  ++  + FD ++    G+   R         K+  +  G    
Sbjct: 267 EIVSFVERIIDHKFGYVTSDGSVYFDITAFEASGNSYARLEPWNRNDTKLQAEGEGALTK 326

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 327 KTTEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 386

Query: 241 IFPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            FPHH+NE+AQS              N ++H G L+++G KMSKS  NF TI E L+   
Sbjct: 387 AFPHHDNELAQSEAYWHETCADHHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD 446

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE--------------AEILL-------- 334
                W    +R+  L+  +++ I+ T   +                A+  +        
Sbjct: 447 -----WTPRSLRIVFLLGGWKDGIEITEDLVKAGNAWEEKTNNFFIKAKDAVAQQDVTPG 501

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
           SK    + +      AV  +L +  NT  A+ A+ +L  +               +    
Sbjct: 502 SKENTFAVALKSAQDAVHQSLCDSFNTAGAMYAISELISKYNIADKSTLAIKDVQEAATW 561

Query: 385 FNASAHILGI 394
             +  +I G+
Sbjct: 562 VTSMVNIFGL 571



 Score =  119 bits (300), Expect = 6e-25,   Method: Composition-based stats.
 Identities = 36/78 (46%), Positives = 51/78 (65%), Gaps = 3/78 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DPS   +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDK 78
           + +  V ++ NITD+DDK
Sbjct: 84  F-KFDVKFIMNITDVDDK 100


>gi|308505978|ref|XP_003115172.1| CRE-CARS-1 protein [Caenorhabditis remanei]
 gi|308259354|gb|EFP03307.1| CRE-CARS-1 protein [Caenorhabditis remanei]
          Length = 770

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 123/487 (25%), Positives = 182/487 (37%), Gaps = 125/487 (25%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           DVL   L + +G+     VR+ +  DD                     +     ++F+ D
Sbjct: 194 DVLSEWLDHNHGKD----VRDHSVFDD---------------------LAKTYEKEFLAD 228

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-------- 161
             RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +           
Sbjct: 229 MARLNVLPVDVLTRVSEYVPEVITYVKKIINNGYAYAAEDGSVYFDTKAFEQNPKHFYAK 288

Query: 162 -----YGSFSRRKIDEQKMGT-----RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                YG  S + +   + G             K+NP DF LWK S   EP W S WG G
Sbjct: 289 LVPEAYGDDSEQLLKNMREGEGELSMSDERLKSKRNPTDFALWKSSKDGEPFWSSEWGNG 348

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N ++H G L
Sbjct: 349 RPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYFLHCGTL 408

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
            ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++   +  A 
Sbjct: 409 RIQGMKMSKSLKNFITIRKALED-------YTPRQLRLLFLMHNWADVLDYSSSTMERAL 461

Query: 331 -------------EILLSKWPQTSTSKGI----------------IDPAVLSALYNDLNT 361
                        +  L +  +   S+G                 +   V  AL + ++T
Sbjct: 462 QFEKITNEFFLLVKDYLRRHYKPDRSEGYQKYQARELKLMDEFGKLKSEVHGALCDSVDT 521

Query: 362 VSAIQALHKLARESTKN----------------HDLLPIFNASAHILG--------IEVC 397
            + I+   +L                        ++         I G        I   
Sbjct: 522 RTVIEKFRELIGLGNAYIVEKEKDGHVPNCLLLRNIAAYITNLLKIFGAIPQSSQEIGFV 581

Query: 398 KEH------------LNKNISIAIEKLVQ----ERLILLKMKK---FSSADYIRKQ-LES 437
            E                 +   ++ L Q     R I  + K        D +R + L  
Sbjct: 582 SEDECNGEGATTSFNKEDIVMPYLDALAQFREKVRNIAKEHKVNGILEECDVLRDKTLTE 641

Query: 438 KGFILED 444
            G  LED
Sbjct: 642 LGVRLED 648



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+
Sbjct: 27  PPQLTVYNSLTRQKEIFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYF 86

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V ++ NITD+DDKII+RARQ H
Sbjct: 87  GYD-VEFIMNITDVDDKIIKRARQSH 111


>gi|325093822|gb|EGC47132.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 806

 Score =  281 bits (720), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/370 (28%), Positives = 164/370 (44%), Gaps = 54/370 (14%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  SI   +T K   +F++D   L  L P    R T ++P
Sbjct: 212 DVQDVLLEYLDSIHGSSIRGEDRSIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 271

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD ++    G+   R         K+  +  G    
Sbjct: 272 EIVSFVERIVKHKFGYVTSDGSVYFDITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 331

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 332 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 391

Query: 241 IFPHHENEIAQSCCADR----IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            FPHH+NE+AQS          +   N ++H G L+++G KMSKS  NF TI E L+   
Sbjct: 392 AFPHHDNELAQSEAYWHETCAHDHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD 451

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
                W    +R+  L++ +++ I+ T   +        K                    
Sbjct: 452 -----WTPRSLRIVFLLSAWKDGIEITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPG 506

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
                 + +      AV  +L +  NT  A+ A+ +L  +               +    
Sbjct: 507 SADNTLAVALKSAQDAVHQSLCDSFNTAGAMYAISELISKYNIADKSTIPTKHIQEAAMW 566

Query: 385 FNASAHILGI 394
             +  ++ G+
Sbjct: 567 VTSMVNVFGL 576



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 7/113 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIER----ARQEHPSIPINDAISIITSKNTQQFVK 109
           + +  V ++ NITD+DDK+  +        +    I+D ++ I       F++
Sbjct: 84  F-KFDVEFIMNITDVDDKVGRQHHFFTEFVNSHPVIDDEVTKIVRSAFAAFLE 135


>gi|221104705|ref|XP_002168960.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 543

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 109/426 (25%), Positives = 164/426 (38%), Gaps = 104/426 (24%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
             +I  +   S +T    +++  D   L         R + +IP+++  I+ II +G   
Sbjct: 49  GSTITEHRIFSELTQYWEKEYNDDMKSLNIRPADIITRVSQYIPEIVAYIERIIENG--- 105

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
                                  + +   G        KK+  DF LWK S   EP W S
Sbjct: 106 ----------------------DLSQLNPGA-------KKSDRDFALWKASKVGEPYWPS 136

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
           PWG GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NEIAQ+       +  N ++
Sbjct: 137 PWGNGRPGWHIECSAMASDILGNSIDIHTGGVDLKFPHHDNEIAQAEAHYNCTQWINYFL 196

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H G L +EG KMSKS  NF+T+ + L       +   +  IRLA L+  +   +D++   
Sbjct: 197 HAGHLTIEGCKMSKSLKNFVTVKDAL-------KKNTSRQIRLAFLLHAWNATLDYSSNV 249

Query: 327 LTEAEILLSKWPQTSTSKGII----------------------------DPAVLSALYND 358
           L EAE +   +     +   I                               +  AL + 
Sbjct: 250 LKEAEQIEKLFMDFFLNVKDIIRNNESFSLTSHNYKEEEKLLQNNFMEKKQKIHEALCDS 309

Query: 359 LNTVSAIQALHKLARESTKN----------------HDLLPIFNASAHILGIEVCKEHLN 402
           +NTV A+Q +  L + +                     +         I G     + + 
Sbjct: 310 INTVVAVQQMQSLVKLANIYIGQARQNNKVPNHAVIGGIAKYLTKMLKIFGANDGDQEIG 369

Query: 403 ------------KNISIAIEKLVQE-----RLILLKMKK---FSSADYIRK-QLESKGFI 441
                       + I +   +LV E     R +  + K        D IR  +L   G  
Sbjct: 370 FSSVDVSGNLKHEEIVMPYIQLVAEFRESVRKVAREKKVPEILKMCDEIRDTKLPELGVQ 429

Query: 442 LEDYKN 447
           LED++ 
Sbjct: 430 LEDHEG 435


>gi|225557189|gb|EEH05476.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 806

 Score =  281 bits (719), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 104/370 (28%), Positives = 163/370 (44%), Gaps = 54/370 (14%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  SI   +T K   +F++D   L  L P    R T ++P
Sbjct: 212 DVQDVLLEYLDSIHGSSIRGEDRSIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 271

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD ++    G+   R         K+  +  G    
Sbjct: 272 EIVSFVERIVKHKFGYVTSDGSVYFDITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 331

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LGK  DIH GG+DL
Sbjct: 332 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDL 391

Query: 241 IFPHHENEIAQSCCADR----IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            FPHH+NE+AQS              N ++H G L+++G KMSKS  NF TI E L+   
Sbjct: 392 AFPHHDNELAQSEAYWHETCAHGHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD 451

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
                W    +R+  L++ +++ I+ T   +        K                    
Sbjct: 452 -----WTPRSLRIVFLLSAWKDGIEITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPG 506

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
                 + +      AV  +L +  NT  A+ A+ +L  +               +    
Sbjct: 507 SADNTLAVALESAQDAVHQSLCDSFNTAGAMYAISELISKYNIADKSTIPTKHIQEAAMW 566

Query: 385 FNASAHILGI 394
             +  ++ G+
Sbjct: 567 VTSMVNVFGL 576



 Score =  122 bits (307), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 7/113 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIER----ARQEHPSIPINDAISIITSKNTQQFVK 109
           + +  V ++ NITD+DDK+  +        +    I+D ++ I       F++
Sbjct: 84  F-KFDVEFIMNITDVDDKVGRQHHFFTEFVNSHPIIDDEVTKIVRSAFAAFLE 135


>gi|255949146|ref|XP_002565340.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211592357|emb|CAP98704.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 800

 Score =  280 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 94/348 (27%), Positives = 151/348 (43%), Gaps = 38/348 (10%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  N  D+    ++  +        +   + +T +  ++F KD   L  L PT   R T 
Sbjct: 214 FYSNAQDLILPYLDALKGASVDADDHSIFTKLTKRYEERFTKDMRDLNVLDPTELTRVTE 273

Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYG---------SFSRRKIDEQKMGT 177
           +  ++   +  I+ +   Y   +  + FD ++    G         S S  K+  +  G+
Sbjct: 274 YGDEIAAFVDRIVKNNFGYATKDGSVYFDINAFEAAGHPYARLEPWSRSDNKLAAEGEGS 333

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K+  +DF LWK S P EP W S WG+GRPGWHIECSAM+S  LG   DIH GG
Sbjct: 334 LASKTTEKRGASDFALWKSSKPGEPSWSSAWGKGRPGWHIECSAMASARLGNQMDIHSGG 393

Query: 238 LDLIFPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           +DL FPHH+NE+AQS          E+  N ++H G L+++G KMSKS  NF TI E L+
Sbjct: 394 IDLAFPHHDNELAQSEAYWHGDHKHEQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALD 453

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------- 339
                 + W    +R+  L+  +++ ++ T   +        K                 
Sbjct: 454 R-----KDWSPRSLRIVFLLGGWKDGVEITDDLVNTGSSWEEKVNNFFLKVKDPAALQSS 508

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
                 +        AV   L +  NT + + ++ +L  +        
Sbjct: 509 GTDTTFAADLETAKKAVHDQLCDSFNTPAVMASISELISKFNIADKAA 556



 Score =  126 bits (317), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 44/102 (43%), Positives = 63/102 (61%), Gaps = 3/102 (2%)

Query: 3   KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L +  T F  ID     +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 21  PPLKVWNSLTKSKTPFVPIDSAGKKVVWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 80

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           + +  V +V NITD+DDKII RARQ+H       A   ITS+
Sbjct: 81  F-KFDVNFVMNITDVDDKIILRARQQHLFNEFITANPTITSE 121


>gi|71894372|ref|YP_278480.1| cysteinyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851160|gb|AAZ43769.1| cysteinyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 406

 Score =  280 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 122/428 (28%), Positives = 201/428 (46%), Gaps = 35/428 (8%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVYD  HIGN RP++ FD++ +  RY   +K   ++ NITDIDDKII +A++
Sbjct: 2   LKIYVCGPTVYDELHIGNMRPILTFDLMLKAARYL--KKDFIFIHNITDIDDKIIFKAKE 59

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           +      N +   +  K +Q+++      +    T     T ++  +   +  +    +A
Sbjct: 60  Q------NISEKELAQKYSQKYLNHLKTFSVDTITKLEYVTKNLEYIESFLDKLYKRDNA 113

Query: 146 YEANNE-IIFDTSS-IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y   N  + F+    + NYG  S + +D+      +  K  K N ADF LWK ++     
Sbjct: 114 YLIENSGLYFNVEKNLNNYGKISNQNLDDMHFDFDLNSKLQKYNKADFALWKNTSEG-IK 172

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           ++S +G+GRPGWH EC A+     G    DIHGGG+DLIFPHHENE  Q       +   
Sbjct: 173 FDSKFGQGRPGWHTECVALIEKNFGDSQLDIHGGGVDLIFPHHENENIQYQALY-QKDIT 231

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             W+ +G +NL   KMSKS  N I+++  LE             ++   LM+     I+ 
Sbjct: 232 KKWLRSGQINLNNEKMSKSLQNIISVDAFLENN-------SGNTLKFIFLMSSLTANINL 284

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAV--------LSALYNDLNTVSAIQALHKLARE 374
               +++A  L  K  + S    + +  +        +  L+  L+    +  ++ L + 
Sbjct: 285 NENLISDASNLDKKLIKLSFLAKVNNLEIKPCDVSKEMEFLFE-LSFSKFMFEVNALLKN 343

Query: 375 STKNH-DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           + KN  + L       + LG    K   +  I        ++    L++K + SAD +R+
Sbjct: 344 ANKNDLEALNKLLFLFNTLGFSYNKLDFSSEIQTY-----KKWKAALELKDYKSADLLRE 398

Query: 434 QLESKGFI 441
            L  K  I
Sbjct: 399 DLLKKNLI 406


>gi|240277739|gb|EER41247.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 783

 Score =  280 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 158/342 (46%), Gaps = 44/342 (12%)

Query: 74  DIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+ D ++E     H S    +  SI   +T K   +F++D   L  L P    R T ++P
Sbjct: 215 DVQDVLLEYLDSIHGSSIRGEDRSIFTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMP 274

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVP 180
           +++  ++ I+ H   Y  ++  + FD ++    G+   R         K+  +  G    
Sbjct: 275 EIVSFVERIVKHKFGYVTSDGSVYFDITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTK 334

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           +   K++ ADF LWK S   EP W SPWG GRPGWHIECSAM+S  LG+  DIH GG+DL
Sbjct: 335 KTMEKRSAADFALWKASKAGEPSWPSPWGDGRPGWHIECSAMASAKLGEQMDIHSGGIDL 394

Query: 241 IFPHHENEIAQSCCADR----IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            FPHH+NE+AQS          +   N ++H G L+++G KMSKS  NF TI E L+   
Sbjct: 395 AFPHHDNELAQSEAYWHETCAHDHWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD 454

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
                W    +R+  L++ +++ I+ T   +        K                    
Sbjct: 455 -----WTPRSLRIVFLLSAWKDGIEITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPG 509

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
                 + +      AV  +L +  NT  A+ A+ +L  +  
Sbjct: 510 SADNTLAVALKSAQDAVHQSLCDSFNTAGAMYAISELISQYN 551



 Score =  129 bits (326), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 3/114 (2%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KIYN+L R    F  +DP    +  Y CGPTVYD AH+G+AR  +  D+L R++R Y
Sbjct: 24  PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
           + +  V ++ NITD+DDKII R RQ H      ++  II  + T+         
Sbjct: 84  F-KFDVEFIMNITDVDDKIITRGRQHHFFTEFVNSHPIIDDEVTKIVRSAFAAF 136


>gi|167957252|ref|ZP_02544326.1| Cysteine--tRNA ligase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 333

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 99/348 (28%), Positives = 167/348 (47%), Gaps = 45/348 (12%)

Query: 141 LHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
             G  Y    + + FDTS + +YG  +R  ID  + G RV  +  K+N  DF +WK S  
Sbjct: 1   AKGFTYIIEGDGLYFDTSKLNDYGKLARLDIDGLEAGARVSVE-GKRNITDFAIWKFSPK 59

Query: 200 M---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
               +  WESPWG G PGWH+ECS ++   LG   DIH GG+D I  HH NEIAQ+    
Sbjct: 60  DSQRDMEWESPWGVGFPGWHLECSVIARETLGDQIDIHTGGIDHIPVHHINEIAQTESVT 119

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             ++ A IW+HN  + ++G KMSKS  N IT++++L+        +     ++A+L  H+
Sbjct: 120 G-KQFAQIWLHNNHIKVDGHKMSKSLKNIITLDDILD------HGFSPAAFKVAVLSKHF 172

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------------PAVLSALYND 358
           +   +FT + +  A      W + ++ +  I+                   A++  L ++
Sbjct: 173 QTEGNFTWEIMKSANQRYKNWQRAASLRHQINKTIDNTDQEKSVPSFAASQALIEILDDN 232

Query: 359 LNTVSAIQALHKLARESTKN-------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           LNT  A+  +  + R+  +          L         ILG+++       +IS  +++
Sbjct: 233 LNTPQALAHIDHVFRQVIEAPLSSINQSALQNFIETINDILGVDLINS--TPDISDDMKQ 290

Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           L+ ER    + K ++ +D IR +L ++G  + D        R + W++
Sbjct: 291 LILERRQAREKKDWAKSDLIRDKLLAQGISIRDT------PRFSIWER 332


>gi|260825281|ref|XP_002607595.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
 gi|229292943|gb|EEN63605.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
          Length = 636

 Score =  280 bits (717), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 126/544 (23%), Positives = 197/544 (36%), Gaps = 144/544 (26%)

Query: 41  IGNARPMIVFDVLYR-------------------------------LLRYYYGEKC---- 65
           +G+AR  I FD+L R                               LL  Y  +K     
Sbjct: 1   MGHARSYISFDILRRVMKDYFNYDVLYAMNITDIDDKIIKRARQNYLLEQYMDKKPSRKQ 60

Query: 66  --------VTYVRNITDIDDKIIERARQEHPSIPINDAI---SIITSKNTQQFVKDT--T 112
                   +   R   D +    ++A  +  +  + + +     I   +     +D    
Sbjct: 61  LLDDTQTAMKPYREKLDRETDPDKKAMLQRITNKVEETVAKLEQIAENSPDASKEDELKK 120

Query: 113 RL--------------ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
            L                L      R + +IP++I  +Q II  G+ YE+N  + FDT+ 
Sbjct: 121 ALVGDARDPLSEWLDSMVLPADVLTRVSEYIPEVIEYVQTIIDKGYGYESNKSVYFDTTK 180

Query: 159 IPN-----YGSF-------SRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
                   Y          S+  ++ E  +         K++  DF LWK S P EP W+
Sbjct: 181 FDGADSHFYAKLVPEAFGDSKAMLEGEGDLSISQDRLSEKRSTTDFALWKASKPGEPSWD 240

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG GRPGWHIECS M+S  LG   DIH GG DL FPHH+NEIAQ+      +     +
Sbjct: 241 SPWGMGRPGWHIECSVMASSILGGSLDIHTGGYDLKFPHHDNEIAQAEAYYDNDHWVRYF 300

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H+G L +EG KMSKS  NFITI E L         + +  +RL  L+  +++ +D++  
Sbjct: 301 LHSGHLTIEGCKMSKSLKNFITIQEALS-------KYSSRQLRLGFLLHSWKDTLDYSSD 353

Query: 326 RLTEAEILLS---------------------KWPQTSTSKGII----DPAVLSALYNDLN 360
            +  A                          KW +               V  AL ++++
Sbjct: 354 TMGTAVKYEKMINEFFLTVKDVLRTDAPPFLKWDKAELQLAESFQQRKEGVHQALCDNID 413

Query: 361 TVSAIQALHKLARESTKN----------------HDLLPIFNASAHILGIEVCKEHLN-- 402
           T + +  + +L  +S                    D+         I G    +E +   
Sbjct: 414 TRATMDQMRELVSDSNVYLKEKRDARQQPDHALLRDIAAYLTRMLKIFGAIEGEELIGFP 473

Query: 403 -------KNISIAI--------EKLVQERLILLKMKK---FSSADYIRKQ-LESKGFILE 443
                   N+   +        E   + R +  + K        D +R   L   G  LE
Sbjct: 474 VGGTSQAANLEETVMPYLSTMAEFRDKVRQVARQEKAKEILQLCDGLRDDVLPQLGVRLE 533

Query: 444 DYKN 447
           D++ 
Sbjct: 534 DHEG 537


>gi|312220209|emb|CBY00150.1| similar to cysteinyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 803

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 103/362 (28%), Positives = 159/362 (43%), Gaps = 54/362 (14%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIF 154
            + +T K   +F +D   L  L P    R T +  Q++  ++ I+ +G AY+ ++  + F
Sbjct: 236 FTKLTQKYEARFNEDMRSLNVLDPHVVTRVTEYGDQIVTFVEKIVDNGFAYKTSDGSVYF 295

Query: 155 DTSSIPN-----YGSFSRRKIDEQKMGTRVPE------KYHKKNPADFILWKRSTPMEPG 203
           D  S        Y         ++ +               K++ ADF LWK S P EP 
Sbjct: 296 DIDSFEKIPGNHYARLEPWNRGDKGLQADGEGALSTQKTSEKRSDADFALWKSSKPGEPA 355

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA----DRIE 259
           W SPWG GRPGWHIECS M+S  LGK  D+H GG+DL FPHH+NE+AQS       D   
Sbjct: 356 WNSPWGPGRPGWHIECSVMASDVLGKQMDVHSGGIDLCFPHHDNELAQSEAHWSGKDGGH 415

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
           +  N ++H G L++ G KMSKS  NF TI E L       + W A  +R+  L+  + + 
Sbjct: 416 QWVNYFLHMGHLSISGSKMSKSLKNFTTIREALAR-----KDWNARSLRIIFLLGGWHDG 470

Query: 320 IDFTVQRLTE---AEILLSKW-------------PQTSTSKGIIDPAVLS-------ALY 356
           I+ T     +    E  +S +               T+T +  I  A  S       AL 
Sbjct: 471 IEITDDMRKQGASWESYVSNFFYKVKDLEVHPNMTSTTTEEERITQAFESAKTKVHNALA 530

Query: 357 NDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKEHLNKNIS 406
           +  +T +A++ + +L  +               D+         + G++   +  +  I 
Sbjct: 531 DSFDTPTAMRTIAQLITDYNSASKSGLSDGLSFDIARYITRIVRVFGLDGSADPNDGTIG 590

Query: 407 IA 408
            A
Sbjct: 591 WA 592



 Score =  125 bits (314), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/114 (39%), Positives = 65/114 (57%), Gaps = 3/114 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
             K+K++N+L R   EF  IDP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L  
Sbjct: 20  PAKLKVWNSLTRSKNEFAPIDPQGKLVKWYNCGPTVYDDAHLGHARNYVTIDILRRILSD 79

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           Y+ E  + +V+NITD+DDKII R RQ+H           +T +     +K    
Sbjct: 80  YF-EYKLLFVQNITDVDDKIILRGRQQHLLAKFKKQNPTVTEEVINTTIKAFDA 132


>gi|324509893|gb|ADY44145.1| Cysteinyl-tRNA synthetase [Ascaris suum]
          Length = 574

 Score =  280 bits (716), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 90/251 (35%), Positives = 131/251 (52%), Gaps = 23/251 (9%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIF 154
              +  K   +F +D ++L  L P    R + ++P++I  +Q II +G+ Y   +  + F
Sbjct: 312 FEKLAKKYENEFHEDMSKLNVLPPDVLTRVSEYVPEVIAYVQKIIDNGYGYTTKDGSVYF 371

Query: 155 DTSSIPNYGSFSRRKI--------DEQKMGTRVPEKY-------HKKNPADFILWKRSTP 199
           DT +  +  + S  K+        ++     R  E          K+NP DF LWK S  
Sbjct: 372 DTIAFESKPNHSYAKLVPEAFGDNEQLLKNMRESEGELSMGNLEEKRNPTDFALWKSSKS 431

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
            EP W+SPWG+GRPGWHIECSAMSS   G   DIH GG DL FPHH+NEIAQ       +
Sbjct: 432 GEPFWDSPWGKGRPGWHIECSAMSSQICGSKLDIHSGGFDLKFPHHDNEIAQVEAHYDYD 491

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              N ++H G L + G KMSKS  NFITI + L       + + A  +R+  LM ++ + 
Sbjct: 492 NWVNYFLHCGTLRIAGMKMSKSLKNFITIRDAL-------KQYTARQLRILFLMHNWTDV 544

Query: 320 IDFTVQRLTEA 330
           +D++   +  A
Sbjct: 545 LDYSASSMERA 555



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             K  ++N+  RK   F  +    ++ Y+CGPTVYD +H+G+AR  + FD+L R++++Y+
Sbjct: 124 SPKFHLFNSFTRKKELFVPLSGKRVKWYICGPTVYDSSHMGHARAYLSFDILRRVMQHYF 183

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V YV NITDIDDKII+RARQ H
Sbjct: 184 GYD-VHYVMNITDIDDKIIKRARQNH 208


>gi|121712962|ref|XP_001274092.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119402245|gb|EAW12666.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 808

 Score =  279 bits (714), Expect = 6e-73,   Method: Composition-based stats.
 Identities = 101/345 (29%), Positives = 158/345 (45%), Gaps = 41/345 (11%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  N  D+    ++  +    +   +   + +T K   +F+KD   L  L P    R T 
Sbjct: 216 FYTNAQDLLLPYLDALKGSSINADDHSIFTKLTKKYEDRFLKDMRDLNVLDPDELTRVTE 275

Query: 128 HIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYG---------SFSRRKIDEQKMGT 177
           +  ++   ++ I+ +   Y  +   + FD ++    G         S S  K+  +  G 
Sbjct: 276 YGAEIADFVEKIVANKFGYVTDDGSVYFDINAFEAAGHPYARLEPWSRSDNKLLAEGEGA 335

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
              +   K++ +DF LWK S P EP W S WGRGRPGWHIECSAM+S  LGK  DIH GG
Sbjct: 336 LTKKTTEKRSASDFALWKASKPGEPSWTSSWGRGRPGWHIECSAMASARLGKEMDIHSGG 395

Query: 238 LDLIFPHHENEIAQSCCAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +DL FPHH+NE+AQS           ++  N ++H G L+++G KMSKS  NF TI E L
Sbjct: 396 VDLAFPHHDNELAQSEAYWSHDHSHTDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREAL 455

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------------WPQ 339
           E      + W    +R+  L+  +R+ ++ T + ++       K                
Sbjct: 456 ER-----KEWTPRSLRIVFLLGGWRDGVEITEELVSAGNSWEEKVNNFFIKIRDPATLQA 510

Query: 340 TSTSKGIIDPAVLSA--------LYNDLNTVSAIQALHKLAREST 376
            ++      PA L A        L +  NT  A+ A+ +L  +  
Sbjct: 511 QTSGTDTTLPAALEAGRKAVHEHLCDSFNTQGAMFAISELISKYN 555



 Score =  129 bits (326), Expect = 7e-28,   Method: Composition-based stats.
 Identities = 44/99 (44%), Positives = 61/99 (61%), Gaps = 3/99 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +KI+N+L R  T F  IDP    +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 24  PPLKIWNSLTRSKTPFVPIDPEAKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           +    V ++ NITD+DDKII RARQ+H       A  +I
Sbjct: 84  F-HFDVKFIMNITDVDDKIILRARQQHLFNEFVTAHPVI 121


>gi|169615663|ref|XP_001801247.1| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
 gi|160703013|gb|EAT81491.2| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
          Length = 837

 Score =  279 bits (714), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 96/360 (26%), Positives = 151/360 (41%), Gaps = 56/360 (15%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
           +T K   +F +D   L  L P    R T +  Q++  ++ I+ +G AY  ++  + FD  
Sbjct: 275 LTQKYEARFNEDMRSLNVLDPNVVTRVTEYGDQIVTFVEKIVANGFAYSTSDGSVYFDIE 334

Query: 158 SIPN-----YGSFSRRKIDEQKMGTRVPE------KYHKKNPADFILWKRSTPMEPGWES 206
           +        Y         ++ +               K++ +DF LWK S P EP W+S
Sbjct: 335 AFEKVPGNHYARLEPWNRGDKSLQADGEGALSQQKTSEKRSESDFALWKSSKPGEPAWKS 394

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD----RIEKTA 262
           PWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS           +  
Sbjct: 395 PWGPGRPGWHIECSVMASDVLGEQMDIHSGGIDLCFPHHDNELAQSEAHWSSKEGGHQWV 454

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N ++H G L++ G KMSKS  NF TI E L         W A  +R+  L+  + + I+ 
Sbjct: 455 NYFLHMGHLSISGSKMSKSLKNFTTIREALARGD-----WNARSLRIIFLLGGWHDGIEI 509

Query: 323 TVQRLTEAEILLSKW------------------------PQTSTSKGIIDPAVLSALYND 358
           T   + +       +                         +   +       V +AL + 
Sbjct: 510 TDD-MRKGGASWESYVTNFFYKVRDLEVHPNIASTGAEDEKVRKAFDAAKEKVHNALADS 568

Query: 359 LNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKEHLNKNISIA 408
            +T +A++A+  L  +               D+         I G++   +  +  I  A
Sbjct: 569 FDTPAAMRAISSLITDYNSADKAGLSDDVSFDVARYITRMVRIFGLDGSADPYDGGIGWA 628



 Score =  124 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 3/114 (2%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
           + K+K++N+L R   EF  +DP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L  
Sbjct: 56  EAKLKVWNSLTRSKNEFVPVDPEGKVVKWYSCGPTVYDDAHLGHARNYVTIDILRRVLAG 115

Query: 60  YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           Y+G   + +V+NITD+DDKII R RQ++           +T +     +K    
Sbjct: 116 YFGYN-LRFVQNITDVDDKIILRGRQQYLLADFKSKNPTVTDELINTTIKAFDA 168


>gi|39940736|ref|XP_359905.1| hypothetical protein MGG_04872 [Magnaporthe oryzae 70-15]
 gi|145010901|gb|EDJ95557.1| hypothetical protein MGG_04872 [Magnaporthe oryzae 70-15]
          Length = 803

 Score =  279 bits (713), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 111/432 (25%), Positives = 178/432 (41%), Gaps = 76/432 (17%)

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +E          + +T +    F  D   L  L P    R T ++PQ+   +  I+  G 
Sbjct: 199 KETIDTSDQSMFTDLTRRMEADFFDDMDNLNNLRPDEITRVTEYVPQIADFVDRIVKKGF 258

Query: 145 AYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWK 195
           AYE+   + FD ++    G+   R          + E+  G+       K++P DF LWK
Sbjct: 259 AYESEGSVYFDIAAFEKGGNTYARLKPESRGDKALQEEGEGSLSKGAGGKRSPGDFALWK 318

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
           +S P EP W SPWG GRPGWHIECS M+S  LG   D+H GG+DL FPHH+NE+AQS   
Sbjct: 319 QSKPGEPYWPSPWGNGRPGWHIECSVMASDRLGAQMDVHSGGIDLAFPHHDNELAQSEAY 378

Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                         ++H G L++ G KMSKS  NF TI + L T      ++ A  +R+ 
Sbjct: 379 YCEHGKGEHTWVKYFLHMGHLSISGSKMSKSLKNFQTIKDALAT------TYSARNLRIV 432

Query: 311 MLMTHYREPIDFTVQR---------------------LTEA--EILLSKWPQTSTSKGII 347
            +M  + E ++ + +                      L EA            S S    
Sbjct: 433 FMMGRWNEGVEISPELRVQADSWENTVNQFFTNTKSWLAEAGVASTNDGLESLSISDDAA 492

Query: 348 DPAVLSALY-----------NDLNTVSAIQALHKLA-------RESTKNHDLLPIFN--- 386
              +L+ L            N  +T  A++ + +L        RE   + DL+ I     
Sbjct: 493 QQGLLADLDQAKKDTQAFLTNSFDTNGALRTIAELVNKVNVHKREHKNDADLVAIERIAR 552

Query: 387 ---ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG---- 439
                  I G++   +     +    +      L  ++ K ++S   +R ++++ G    
Sbjct: 553 WVTRMVGIFGLDANAKPPYNGLGWVSDPSAGLDLEAVR-KTYAS---VRDEIKTSGFAES 608

Query: 440 -FILEDYKNPDN 450
              + D ++P +
Sbjct: 609 VIAVLDTQSPAS 620



 Score = 95.3 bits (236), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 5/112 (4%)

Query: 2   KKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
              IK++N+L+      F+  +  N+  Y CGPTVYD +H+G+AR  +  D++ R+  +Y
Sbjct: 3   SPTIKVHNSLQPGGPVPFEPKEKGNVSWYACGPTVYDQSHLGHARNYVSTDIIRRIFLHY 62

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVK 109
           +  K V +V NITDIDDKII RAR++               + +   + F+ 
Sbjct: 63  FDYK-VKFVMNITDIDDKIIIRARRQRLLDLEKKKAYTPEELHALGAKAFLA 113


>gi|317155055|ref|XP_003190552.1| cysteinyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 806

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 100/386 (25%), Positives = 163/386 (42%), Gaps = 51/386 (13%)

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +     D+    ++  +    +   +   + +T +  ++F+KD   L  L P    R T
Sbjct: 213 KFYTEAQDLLLPYLDSLKGTSINADDHGIFTKLTKRYEERFLKDMRDLNVLDPNEITRVT 272

Query: 127 NHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGS---------FSRRKIDEQKMG 176
            +  ++   ++ I+ +   Y  +   + FD  +    G           S  K+  +  G
Sbjct: 273 EYGAEIADFVEKIVKNNFGYVTDDGSVYFDIEAFEAAGHPYARLEPWNRSDSKLLAEGEG 332

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           +   +   K++ +DF LWK S P EP W S WGRGRPGWHIECSAM+S  LGK  DIH G
Sbjct: 333 SLTKKATDKRSASDFALWKASKPGEPSWASSWGRGRPGWHIECSAMASARLGKQLDIHSG 392

Query: 237 GLDLIFPHHENEIAQSCCAD-------RIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           G+DL FPHH+NE+AQS             E+  N + H G L+++G KMSKS  NF TI 
Sbjct: 393 GVDLAFPHHDNELAQSEAYWADSHNHSHDEQWVNYFFHMGHLSIQGSKMSKSLKNFTTIR 452

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------- 339
           E LE      + W    +R+  L+  +++ ++ T   ++       K             
Sbjct: 453 EALER-----KEWTPRSLRIVFLLGGWKDGVEITDDLVSAGSSWEEKVNNFFIKVKDPAA 507

Query: 340 ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HD 380
                     +T+      AV   L +  NT  A+ A+ +L  +                
Sbjct: 508 LQGSGTDDTLATALADGQKAVYEHLCDSFNTPGAMYAISELITKYNSADKSAVNPKDVEA 567

Query: 381 LLPIFNASAHILGIEVCKEHLNKNIS 406
           +     +  +I G+       ++ I 
Sbjct: 568 VARWVTSMVNIFGLNGKAAADSQEIG 593



 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/100 (40%), Positives = 57/100 (57%), Gaps = 3/100 (3%)

Query: 3   KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L R    F  ID     +  Y CGPTVYD AH+G+AR  +  D++ R++R Y
Sbjct: 24  PPLKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           + +  V +V NITD+DDKII R RQ+H           I 
Sbjct: 84  F-KFDVNFVMNITDVDDKIILRGRQQHLFTEFTSEHPTIA 122


>gi|317035121|ref|XP_001401149.2| cysteinyl-tRNA synthetase [Aspergillus niger CBS 513.88]
          Length = 804

 Score =  279 bits (713), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 88/319 (27%), Positives = 137/319 (42%), Gaps = 42/319 (13%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
           +  + +T K    F++D   L  L P    R T +  Q+   ++ I+ +   Y  ++  +
Sbjct: 238 EIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRVTEYGQQIADFVEKIVANKFGYVTSDGSV 297

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTR---------VPEKYHKKNPADFILWKRSTPMEPG 203
            FD  +    G+   R ++      +         +     KK+  DF LWK S P EP 
Sbjct: 298 YFDIKAFEEAGNHYAR-LEPWNRNNQPLLRDGEGALSRATEKKSSDDFALWKASRPGEPS 356

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE--KT 261
           W S WG+GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+AQS         + 
Sbjct: 357 WSSKWGQGRPGWHIECSAMASSCLGSQIDIHSGGIDLAFPHHDNELAQSEAYWCEHKQQW 416

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L+++G KMSKS  NF T+ + LE        +    +R+  L+  +R+ ++
Sbjct: 417 VNYFLHMGHLSIQGSKMSKSLKNFTTVKDALERGD-----YTPRSLRIVFLLGGWRDGVE 471

Query: 322 FTVQRLTEAEILLSKWPQ------------------------TSTSKGIIDPAVLSALYN 357
            T   +  A     K                            S +       V     +
Sbjct: 472 ITDDLIKNASSWEEKLNNFFVKAKDPSSFRSSDEAPTSSSETLSQALKSTQEKVHEYFCD 531

Query: 358 DLNTVSAIQALHKLAREST 376
             +T   + A+ +L     
Sbjct: 532 SFDTPKVMAAISELVTTFN 550



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 8/128 (6%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K++N+L R  T F  +DP    ++ Y CGPTVYD AH+G+AR  +  D+L R+LR Y
Sbjct: 21  PPLKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRDY 80

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR-----LA 115
           + +  V +V NITD+DDKII R RQ+H           +T    +   K  +      L 
Sbjct: 81  F-KFDVEFVMNITDVDDKIILRGRQQHLFNKYIAEHPTVTPDVLETARKAYSAYIKKNLP 139

Query: 116 CLAPTHQP 123
            + P  +P
Sbjct: 140 LVDPDTEP 147


>gi|293363664|ref|ZP_06610414.1| putative cysteinyl-tRNA synthetase [Mycoplasma alligatoris A21JP2]
 gi|292552771|gb|EFF41531.1| putative cysteinyl-tRNA synthetase [Mycoplasma alligatoris A21JP2]
          Length = 403

 Score =  279 bits (713), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 126/422 (29%), Positives = 187/422 (44%), Gaps = 36/422 (8%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           YVCGPTVY   HIGN RP+   D+  +  R         +V NITDIDDKII +A     
Sbjct: 1   YVCGPTVYSDLHIGNIRPITTIDLFLKANRNL--NIPFIFVHNITDIDDKIINKA----- 53

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-E 147
            I +      I++K  +Q+ +    L     TH      ++  +   IQ ++ +  AY +
Sbjct: 54  -IELKVDELEISTKYAKQYKELLNALKIDTITHLVYVRKNMDLITDYIQELLNNKSAYFD 112

Query: 148 ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
            N  ++FD     N YG  S++KID+        E   K +P+DF LWK +      + S
Sbjct: 113 LNKNVLFDVKKYENNYGIVSKQKIDKMIF---ENENVQKNHPSDFALWKNTNIG-VKFNS 168

Query: 207 PWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
            +G GRPGWH ECSA+   Y  G+  DIH GG+DL FPHHENE  Q        +    W
Sbjct: 169 SFGPGRPGWHTECSALIKKYFNGESLDIHSGGIDLKFPHHENENIQHFALYN-RQITKKW 227

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G +N  G+KMSKS GN +   + LE        +   V R+  L++    P++   +
Sbjct: 228 LHCGHINFAGQKMSKSLGNVVLAKDFLE-------QYGPNVFRMIQLLSDITSPMNLDEE 280

Query: 326 RLTEAEILLSKWPQTS-------TSKGIIDPAVLSALYND---LNTVSAIQALHKLARES 375
            +  A+   SK  Q S            I+  +   L       N       L++  +  
Sbjct: 281 FIKNAQKAFSKIKQLSFKLFLQDNLSNEINQELYKELNLKIVEFNNSRFNFILNQQLKNL 340

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
            KN D + I N    +   +      +  +   ++ +  +    L  K + SAD  RK L
Sbjct: 341 NKNFDFI-IANTLIKVF--KDLGFSFDFLVYEKMKNVYLDWQKELSNKNYESADKYRKIL 397

Query: 436 ES 437
             
Sbjct: 398 ID 399


>gi|302410221|ref|XP_003002944.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261357968|gb|EEY20396.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 792

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 99/372 (26%), Positives = 148/372 (39%), Gaps = 60/372 (16%)

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
           +E          + +T    Q F  D   L  L P    R T ++PQ+   +  I+  G 
Sbjct: 186 KETVDTSDQTMFTDLTQSMEQLFFDDMDALNVLRPDVITRVTEYVPQIADFVARIVDKGF 245

Query: 145 AYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPADFILWK 195
           AYE++  + FD ++    G+   R          + E   G        K++  DF LWK
Sbjct: 246 AYESDGSVYFDITAFEKAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRSDGDFALWK 305

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
           +S   EP W S WG GRPGWHIECS M+S  LG   DIH GG+DL FPHH+NE+AQS   
Sbjct: 306 KSKEGEPYWPSRWGNGRPGWHIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAY 365

Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                         ++H G L++ G KMSKS  NF TI + L T       + +  +R+ 
Sbjct: 366 YCEQEKGEHTWVRHFLHMGHLSISGSKMSKSLKNFQTIQDALATN------YTSRSMRVV 419

Query: 311 MLMTHYREPIDFTVQR----------------------LTEAEILLSKWPQTSTSKGII- 347
            L+  + + ++ +                         L ++          S S     
Sbjct: 420 FLLGKWNDGVEISPDMRAQGASWETLVSNFFANIKARVLDQSSAPSEGVKSLSVSDDTPK 479

Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASA----H 390
                        +  AL N  +T  A++ +  L   +     + D +    A A     
Sbjct: 480 SGLAAELEKAKKEMHDALSNSFDTPQAMRIIQDLIGTANLQLADEDSVTTLEAIARWITQ 539

Query: 391 ILGIEVCKEHLN 402
           I+GI    E+  
Sbjct: 540 IVGIFGLDENAQ 551



 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 60/111 (54%), Gaps = 5/111 (4%)

Query: 3   KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + +K++N+L   +   F  I+   +  Y CGPTVYD +H+G+AR  +  D++ R++ +Y+
Sbjct: 2   ESLKVHNSLSPGQPVPFDPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMHYF 61

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVK 109
            +  + +V NITDIDDKII +AR++           +   +       F  
Sbjct: 62  -KADLKFVMNITDIDDKIIIKARRQRLLELEKKKTYSDDELAKLALDAFRA 111


>gi|325973156|ref|YP_004250220.1| cysteinyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651758|gb|ADX97840.1| cysteinyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 435

 Score =  278 bits (712), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 124/467 (26%), Positives = 191/467 (40%), Gaps = 61/467 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +++TL R        +   I +Y+CGPT+Y++ H+GN RP++VFD L R  +    
Sbjct: 1   MNLWLFDTLSRSKKSIS--EEPVITIYLCGPTLYNYLHLGNLRPIVVFDFLIRYFKII-- 56

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +   YV+N+TDID+KII +A+ E      N  +  I  +  + F      L  + P   
Sbjct: 57  NQPYKYVQNLTDIDEKIILKAKHE------NKTVKEIVDQYAESFFNILKNLNIVWPDQL 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           P  + HI  + + I +++  G A            +T        FS  ++DE+      
Sbjct: 111 PTVSTHIKNIQFHIDSLLKQGKAVWDKKTQTIRFLNTGKEKGLNYFSGNEVDEEDSC--- 167

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                      F LWK +      WESPW  G PGWH+EC AM          IHGGG+D
Sbjct: 168 -----------FALWKENNHTSYSWESPWFPGIPGWHLECFAMIEDNFSLPITIHGGGVD 216

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE    C        A +W+H G +  E  K+SKS+   + + E  E      
Sbjct: 217 LKFPHHENEN-LLCRFWHNHDLAKVWVHVGQVLNEAGKLSKSSNYSLAVEECAE------ 269

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRL----TEAEILLSKW-----------------P 338
             +    +R   +   Y +P     + L    +E +  L+                    
Sbjct: 270 -QYSWNFLRYIFMKVRYNKPFMINKEALSSYWSEWKSYLTALNYAEITLLNAKHIFFCPE 328

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHIL-GI 394
           +        D  ++  L NDLN    +  L  L +    S K  D   I      +L  +
Sbjct: 329 KELRKIEKPDETIVKHLENDLNLPELLSWLEDLKKTLLNSIKKSDYDNILFYWKKLLTSL 388

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           EV    L +     I++  +    LL  K +  AD +R +L  KG +
Sbjct: 389 EVLGFTLERLSRENIDE-AERWFDLLSQKNYEEADKLRLRLTEKGIL 434


>gi|189206896|ref|XP_001939782.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187975875|gb|EDU42501.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 797

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 112/465 (24%), Positives = 171/465 (36%), Gaps = 119/465 (25%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
            + +T K   +F +D   L  L P    R T +  +++  +  II +G AY  ++  + F
Sbjct: 235 FTTLTKKYEARFNEDMQNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYSTSDGSVYF 294

Query: 155 DTSSIPNYGSFSRR---------KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPMEPGW 204
           D  +    G+   R          +     G     K   K+N +DF LWK S P EP W
Sbjct: 295 DIENFEKEGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNDSDFALWKSSKPGEPAW 354

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DRIEKT 261
            SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS      D   + 
Sbjct: 355 NSPWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYWQKDGGAQW 414

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
            N ++H G L++ G KMSKS  NF TI E L         W A  +R+  L+  + + I+
Sbjct: 415 VNYFLHMGHLSISGSKMSKSLKNFTTIREALSRGD-----WNARSLRIIFLLGGWHDGIE 469

Query: 322 FTVQRLTEAEILLSKW------------------------PQTSTSKGIIDPAVLSALYN 357
            T   + ++      +                         +   S       V +AL +
Sbjct: 470 ITPD-MRKSGSSWESYVTNFFYKVRDLEVHPNITSTATEDEKVLKSFESAKEKVHNALAD 528

Query: 358 DLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE------------ 395
             +T +A++A+  L  +               D+         I G++            
Sbjct: 529 SFDTPTAMRAISSLITDYNSADKAGLSDSVSFDVARYITRMVRIFGLDGKADPYDGGIGW 588

Query: 396 -------VCKEH----------------LNKNISIAIEKLVQERLILLK----------- 421
                    KEH                        ++ ++ +     +           
Sbjct: 589 AGIDIPSAAKEHVYAVSRERDEVRQHAIAGDLSEDVLDSIISQHNAAKRQDMDALPYAEV 648

Query: 422 -----------------MKKF-SSADYIRKQ-LESKGFILEDYKN 447
                             K +    D +R   L   G  LED +N
Sbjct: 649 LTTFQQNLKTLASKKAPAKDYLDLCDQLRDTHLWDLGIYLEDREN 693



 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 3/112 (2%)

Query: 4   KIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+K++N+L R   +F  IDP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L +YY
Sbjct: 21  KLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVTNDILRRILAHYY 80

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           G   V +V+NITD+DDKII R RQ+H           +T +     +K    
Sbjct: 81  GYN-VKFVQNITDVDDKIILRGRQQHLLAKFKAENPSVTREVIDTTIKAFDA 131


>gi|119715257|ref|YP_922222.1| cysteine--tRNA ligase [Nocardioides sp. JS614]
 gi|119535918|gb|ABL80535.1| Cysteine--tRNA ligase [Nocardioides sp. JS614]
          Length = 390

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 113/356 (31%), Positives = 170/356 (47%), Gaps = 17/356 (4%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
            + R+YVCG T YD  H+G+A   +  D+L  +L        V+  RN+TD+DD ++E A
Sbjct: 41  GSARVYVCGITPYDVTHLGHASTFVWADLLASVLD--GTGVDVSTCRNVTDVDDVLLEAA 98

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           R              +       F +    L    P HQPRA +++  ++ L Q ++  G
Sbjct: 99  RLRGSH------FDELAVTQEADFDRSMRELRVATPAHQPRARHYVDAVVQLAQALLDAG 152

Query: 144 HAYEANNEIIFDTSSIPNYGSFSR-RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
            AYE +  + F    +       R R +   +     P +  K +  D  +W+ S   +P
Sbjct: 153 AAYERDGTVWFRGRDVVARTGLERDRALALAEAYGDQPGEPAKDDSFDVAVWRPSADQQP 212

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W SPWG GRPGWH EC+AM+    G   D+  GG DL+FPHH  ++A +     +   A
Sbjct: 213 AWASPWGWGRPGWHAECAAMALAVHGPSVDVLVGGDDLVFPHHAYQVAMAEAVSGVAPFA 272

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
              +H G + + G+KM+KS+GN + +++LLE         P   +RL +L   Y EP DF
Sbjct: 273 RAQLHVGEVRIGGQKMAKSSGNLVLVDDLLE-------HLPPAALRLHLLHRRYAEPWDF 325

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDP-AVLSALYNDLNTVSAIQALHKLARESTK 377
              +L EAE LL      +   G  DP A L AL  DL+  +A+        ES +
Sbjct: 326 EAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALRTDLDVPTAVATALDQGGESAR 381


>gi|325989599|ref|YP_004249298.1| Cysteinyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574684|emb|CBZ40340.1| Cysteinyl-tRNA synthetase [Mycoplasma suis]
          Length = 435

 Score =  277 bits (710), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 124/467 (26%), Positives = 191/467 (40%), Gaps = 61/467 (13%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +++TL R        +   I +Y+CGPT+Y++ H+GN RP++VFD L R  +    
Sbjct: 1   MNLWLFDTLSRSKKSIS--EEPVITIYLCGPTLYNYLHLGNLRPIVVFDFLIRYFKII-- 56

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
            +   YV+N+TDID+KII +A+ E      N  +  I  +  + F      L  + P   
Sbjct: 57  NQPYKYVQNLTDIDEKIILKAKHE------NKTVKEIVDQYAESFFNILKNLNIVWPDQL 110

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           P  + HI  + + I +++  G A            +T        FS  ++DE+      
Sbjct: 111 PAVSTHIKNIQFHIDSLLKQGKAVWDKKTQTIRFLNTGKEKGLNYFSGNEVDEEDSC--- 167

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                      F LWK +      WESPW  G PGWH+EC AM          IHGGG+D
Sbjct: 168 -----------FALWKENNHTSYSWESPWFPGIPGWHLECFAMIEDNFSLPITIHGGGVD 216

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHHENE    C        A +W+H G +  E  K+SKS+   + + E  E      
Sbjct: 217 LKFPHHENEN-LLCRFWHNHDLAKVWVHVGQVLNEAGKLSKSSNYSLAVEECAE------ 269

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRL----TEAEILLSKW-----------------P 338
             +    +R   +   Y +P     + L    +E +  L+                    
Sbjct: 270 -QYSWNFLRYIFMKVRYNKPFMINKEALSSYWSEWKSYLTALNYAEITLLNAKHIFFCPE 328

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---ESTKNHDLLPIFNASAHIL-GI 394
           +        D  ++  L NDLN    +  L  L +    S K  D   I      +L  +
Sbjct: 329 KELRKIEKPDETIVKHLENDLNLPELLSWLEDLKKTLLNSIKKSDYDNILFYWKKLLTSL 388

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           EV    L +     I++  +    LL  K +  AD +R +L  KG +
Sbjct: 389 EVLGFTLERLSRENIDE-AERWFDLLSQKNYEEADKLRLRLTEKGIL 434


>gi|294880574|ref|XP_002769069.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239872171|gb|EER01787.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 769

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 122/449 (27%), Positives = 178/449 (39%), Gaps = 96/449 (21%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII------ 140
             +I   +       K  ++F++D   L    P      T  +  ++   Q         
Sbjct: 198 GATIEDKEIFYAHARKYEKEFLEDCESLGIREP------TEVVEVLVGTCQKSSSSFKLW 251

Query: 141 -LHGHAYEANNEIIFDTSSIP----NYGSF--------SRRKIDEQK-----MGTRVPEK 182
              G AYE+   + FDT        NY           +  +I E +       T     
Sbjct: 252 VQRGIAYESKGSVYFDTQRYKTHGFNYPKLVPSAGKGATDAEIAEGEGALSTNATGGDFG 311

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K++  DF LWK S   EP WESPWG GRPGWHIECS M+S  LG   DIHGGG DL F
Sbjct: 312 SEKRHRNDFALWKSSKRGEPSWESPWGLGRPGWHIECSVMASEVLGAHIDIHGGGSDLKF 371

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHH+NEIAQS       +  N ++H G L+++G KMSKS  NFITI + L       +S+
Sbjct: 372 PHHDNEIAQSEAYHFNAQWVNYFLHAGHLHIKGLKMSKSLKNFITIRQAL-------QSY 424

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAE-----------------------ILLSKWPQ 339
            A  +R+  L+  + +PI+F+ Q + EA+                        +  KW +
Sbjct: 425 TARQLRIMFLLQQWDKPINFSDQTIAEAKDKETRFNSFFNRVKELLRTRPPYSIRQKWEE 484

Query: 340 TSTSKGIIDP------AVLSALYNDLNTVSAIQALHKLARESTKN--------------- 378
            S    I +       AV  AL ++ NT  A+  L  +                      
Sbjct: 485 ESLDFAINEQIATAMAAVHEALCDNFNTSEAMTQLDNIVTAVNSYMVKSENPKAPLIQQA 544

Query: 379 ----HDLLPIFNAS--AHILGI-EVCKEHLNKNISIAIEKLVQERLILL----KMKK--- 424
                 +L IF  +  A +LG+    +   +K +S  +      R  L       K    
Sbjct: 545 AQYVQKMLTIFGVTDNADVLGLSSGAQGEESKTLSNVLTAFASFREQLRSTAQADKNKML 604

Query: 425 FSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
               D +R + +   G  LED  +  +  
Sbjct: 605 LQMCDDLRDETMVDLGVRLEDKPDGSSVW 633



 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L      F  I+   +RMYVCGPTVYD AH+G+AR  + FD++ R+L  Y+
Sbjct: 20  DMGLRVHNSLTDTKVPFVPINGKEVRMYVCGPTVYDSAHMGHARAYLTFDIIRRILEDYF 79

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
             +   Y  NITDIDDKII +AR+       + +   +
Sbjct: 80  QYRVF-YQMNITDIDDKIILKARKGELVRQYSSSHHSL 116


>gi|308802207|ref|XP_003078417.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116056869|emb|CAL53158.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 503

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 96/255 (37%), Positives = 133/255 (52%), Gaps = 17/255 (6%)

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           +           I D    +  +   +F++D   L    P    R + ++ ++I  IQ I
Sbjct: 187 LASDDACARDWKIQDGYLELAREFEAEFMEDMKSLGIARPDALTRVSEYVDKVILYIQVI 246

Query: 140 ILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKM-----GTRVPEKYHKKNPA 189
           I  G AYE+NN + FD  +        YG  ++  +   +      G    EK  K++  
Sbjct: 247 INKGFAYESNNSVYFDVKAFEEAENHKYGKLNKNAMANVEEAMDGEGALAAEKSEKRSEF 306

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           DF+LWK S   EP W SPWG GRPGWHIECSAM S  LGK  DI+GGG+DL FPHHEN++
Sbjct: 307 DFVLWKASKSGEPSWSSPWGMGRPGWHIECSAMCSDVLGKSVDINGGGIDLNFPHHENQL 366

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           AQS     IE+  N +IH G L+++G KMSKS  NFITI   L+        + A  IR 
Sbjct: 367 AQSEAHYDIEQWVNFFIHTGHLHIDGLKMSKSLKNFITIRAALKM-------YSARQIRF 419

Query: 310 AMLMTHYREPIDFTV 324
             L+  + +P++ T 
Sbjct: 420 LFLLNQWCDPMELTP 434



 Score =  120 bits (301), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 1/97 (1%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +++  ++ NT  +    F  +  +++  Y+CGPTVYD AH+G+AR  + FDVL R++  Y
Sbjct: 43  LRRGPRLLNTFTKTKVPFVPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVMSEY 102

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
           +G   V +V N+TDIDDKII RA        +  A  
Sbjct: 103 FGYD-VRFVMNVTDIDDKIIMRAHTRRAQDVVESARR 138


>gi|288918881|ref|ZP_06413225.1| Cysteine--tRNA ligase [Frankia sp. EUN1f]
 gi|288349733|gb|EFC83966.1| Cysteine--tRNA ligase [Frankia sp. EUN1f]
          Length = 375

 Score =  277 bits (709), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 105/406 (25%), Positives = 160/406 (39%), Gaps = 44/406 (10%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M+  ++    L R             R+YVCG T Y   H+G+A   +  D+  R+ R  
Sbjct: 1   MRPDLR----LGRTPIPVV----GRARVYVCGITPYAVTHLGHAATYLWTDLTARVWRAA 52

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
             +  V   RNITD+DD +   AR+      +      + +     F +  + L    P 
Sbjct: 53  GVQ--VELARNITDVDDAMFTEARR------LGMPFDQVAAMQRFSFDRSMSALGIQPPD 104

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           H+P A   + ++I L   ++  GHAYE N  +   T+   +     R             
Sbjct: 105 HEPTARAAVTRVIELTTALLRAGHAYERNGTVYARTAEAADRAGLDRAAAITLAAEFNDD 164

Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
            +   ++    +   R+ P E   P W SPWG GRPGWH EC+AM     G   D+H GG
Sbjct: 165 PRDPDRDDPLDVAVWRADPAEGQLPSWPSPWGPGRPGWHAECAAMVLSTFGSSIDLHVGG 224

Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
            DL FPHH  E   +  A  +   A  W+H G + + G KMSKS GN   +++LL     
Sbjct: 225 ADLRFPHHAVESLLAEQATGVRPFARAWLHPGTVRVGGVKMSKSLGNLAFVDDLLTRH-- 282

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIID 348
                    +RL  L   +    DF       AE  L      +           +    
Sbjct: 283 -----TPAALRLLCLGRAWDADWDFDESAFDAAEAALDGLYAAAARPNGGGGGERESPAA 337

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
             V +AL ++L+TV A     +   ++               +LG+
Sbjct: 338 AEVDAALLDNLDTVRAQAVALEAGGDAA---------RRFISVLGL 374


>gi|224011277|ref|XP_002295413.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|209583444|gb|ACI64130.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 322

 Score =  277 bits (708), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 106/322 (32%), Positives = 150/322 (46%), Gaps = 57/322 (17%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE------KCVTYVRNITDIDDKIIE 81
            Y+CGPTVYD AH+G+ R  ++ D+L R+    +            YV N+TD+DDKII+
Sbjct: 1   WYICGPTVYDSAHLGHGRTYVLLDILRRVAINLHKGSASHLTPPPLYVMNVTDVDDKIIQ 60

Query: 82  RARQEHPSIPINDAISI-----ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ-MIYL 135
           R+ +          +       +      +F +D  RL  L P    R + H+   ++  
Sbjct: 61  RSMENASQQSTTSTVQEADPLSLARHFEAEFWQDMDRLNVLRPDIVCRVSEHVESTIVPY 120

Query: 136 IQNIILHGHAY---------EANNEIIFDTSSIP-------NYGSFS------------R 167
           I+ I+  G AY         + N  + FD  +          YG  +             
Sbjct: 121 IEQILKGGMAYVIPEGDDNTQQNGSVYFDVRAFESLTSGRTKYGKLAPDVASSDFFSLEA 180

Query: 168 RKIDEQK-MGTRVPEKYHKKNPADFILWK--------RSTPMEP---GWESPWGRGRPGW 215
              DE    G  V     K++P DF LWK        +ST +EP    ++SPWG GRPGW
Sbjct: 181 ADADENNSEGQHVSLIRKKRDPRDFCLWKYRSRTQNNKSTVIEPASVSFKSPWGFGRPGW 240

Query: 216 HIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
           H+ECSAM             F +H GG+DL FPHH NEIAQ+      ++    W+H G 
Sbjct: 241 HVECSAMIQRLAEDFSYTHQFQLHAGGIDLKFPHHSNEIAQAEAYGDWKEWIPHWVHTGH 300

Query: 271 LNLEGRKMSKSNGNFITINELL 292
           L ++GRKMSKS  NF+TI E+L
Sbjct: 301 LYVKGRKMSKSLKNFVTIREML 322


>gi|158312510|ref|YP_001505018.1| cysteine--tRNA ligase [Frankia sp. EAN1pec]
 gi|158107915|gb|ABW10112.1| Cysteine--tRNA ligase [Frankia sp. EAN1pec]
          Length = 371

 Score =  276 bits (707), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 105/349 (30%), Positives = 148/349 (42%), Gaps = 23/349 (6%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
              R+YVCG T Y   H+G+A   +  D+  R+ R       V   RNITD+DD + + A
Sbjct: 16  GRARVYVCGITPYAVTHLGHAATYLWTDLAIRVWRNVG--VPVELARNITDVDDAMFDEA 73

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           R+             I S     F +  T L    P H+P A   + ++I L   ++  G
Sbjct: 74  RRTGLP------FDQIASLQRFAFDRTMTSLGIRPPDHEPTARAAVTRVIELATALLRAG 127

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG-TRVPEKYHKKNPADFILWKRSTP--M 200
           HAYE    +   T+         R             P    + +P D  +W+ + P   
Sbjct: 128 HAYERGGSVYARTAEAAERAGLDRAAAIALAAEYNDDPHDPERDDPLDVAVWRAARPDGG 187

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
            P W SPWG GRPGWH EC+AM     G   D+H GG DL +PHH  E   +  A  ++ 
Sbjct: 188 YPSWPSPWGPGRPGWHAECAAMVLSTFGSSVDLHAGGADLRYPHHAVEALLAERATGVQP 247

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  W+  G +   G KMSKS GN   +++LL              +RL  L+    +  
Sbjct: 248 FARAWLRPGTVRSGGVKMSKSLGNLTFVDDLLTRH-------SPAAVRLLCLVRPRDDDW 300

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSA 364
           DF      EAE  L      +   G +        V +AL +DL+TV A
Sbjct: 301 DFDEAAFDEAEAGLDLLYSAAGRPGAVRGASAVDEVDAALLDDLDTVRA 349


>gi|134099214|ref|YP_001104875.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|291007173|ref|ZP_06565146.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
 gi|133911837|emb|CAM01950.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
          Length = 375

 Score =  275 bits (705), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 102/351 (29%), Positives = 153/351 (43%), Gaps = 24/351 (6%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
              R+Y CG T YD  H+G+A   +  DVL R+LR    E      RN+TD+DD +   +
Sbjct: 16  DRARVYACGVTPYDVTHLGHAATFVWVDVLARVLRLLDVE--PEVCRNVTDVDDVLDAAS 73

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
            +               + +  QF  D   L    P H+PRA  ++  +I L   ++  G
Sbjct: 74  ERAGAY------YDRFAAIHQFQFDDDMAALNVRPPEHEPRAHRYVESVIRLACGLLGRG 127

Query: 144 HAYEANNEII---FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
            AY +   +     D  +          ++  Q  G   P+   K++  D  +W+ S P 
Sbjct: 128 AAYSSGGSVYFRGHDVPARAGVERLEALRLARQFGGR--PDDPAKEDEFDVAVWQASEPG 185

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
            P W+SPWG GRPGWH EC AMS   LG   DIH GG DL FPHH    A +     I  
Sbjct: 186 HPSWDSPWGPGRPGWHAECVAMSLSVLGAGVDIHAGGADLRFPHHAYHAAMAEAFTGITP 245

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
            A  W H G + + G KM+KS GN + + +LL           +  IRL +L   ++   
Sbjct: 246 YARSWFHVGTVAVAGEKMAKSAGNLVLLGDLLAEH-------SSDTIRLMILDRPWQSSW 298

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA----LYNDLNTVSAIQA 367
           D+  Q+   A   +    + +        A +      L ++L+  +A+  
Sbjct: 299 DYLPQQADAAADRVEALRRAAARDEAASQAAVGEVHRLLAHELDVPAALDV 349


>gi|268565691|ref|XP_002639522.1| Hypothetical protein CBG04128 [Caenorhabditis briggsae]
 gi|187036303|emb|CAP24909.1| CBR-CARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 584

 Score =  275 bits (704), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 107/375 (28%), Positives = 158/375 (42%), Gaps = 81/375 (21%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           DVL   L + +G+     VR+ +  DD                     +     ++F+ D
Sbjct: 193 DVLSEWLDHNHGKD----VRDHSVFDD---------------------LAKTYEKEFLAD 227

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPN-------- 161
             RL  L      R + ++P++I  ++ II +G+AY A +  + FDT +           
Sbjct: 228 MARLNVLPVDVLTRVSEYVPEVITYVKKIINNGYAYAAEDGSVYFDTKAFEQNPKHFYAK 287

Query: 162 -----YGSFSRRKIDEQKMGT-----RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
                YG  S   +   + G             K+NP DF LWK S   EP W S WG G
Sbjct: 288 LVPEAYGDDSELLLKNMREGEGELSMSDERLKSKRNPTDFALWKSSKDGEPFWPSEWGNG 347

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECS MSS   G   DIH GG DL FPHH+NEIAQ           N ++H G L
Sbjct: 348 RPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDNEIAQVEAHYDDPHWVNYFLHCGTL 407

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
            ++G KMSKS  NFITI + LE        +    +RL  LM ++ + +D++   +  A 
Sbjct: 408 RIQGMKMSKSLKNFITIRKALED-------YTPRQLRLLFLMHNWADVLDYSSSTMERAL 460

Query: 331 -------------EILLSKWPQTSTSKGI----------------IDPAVLSALYNDLNT 361
                        +  L +  +   S+G                 +   V +AL + ++T
Sbjct: 461 QFEKITNEFFLLVKDFLRRHYKPDRSEGYQKYQARELKLMAEFGNLKSEVHAALCDSVDT 520

Query: 362 VSAIQALHKLAREST 376
            + I+   +L     
Sbjct: 521 RTVIEKFRELIGLGN 535



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 39/86 (45%), Positives = 58/86 (67%), Gaps = 1/86 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YN+L R+   F   +   +R Y+CGPTVYD +H+G+AR  +  D+L R+ R Y+
Sbjct: 26  PPQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRDYF 85

Query: 62  GEKCVTYVRNITDIDDKIIERARQEH 87
           G   V ++ NITD+DDKII+RARQ H
Sbjct: 86  GYD-VEFIMNITDVDDKIIKRARQSH 110


>gi|330924798|ref|XP_003300783.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
 gi|311324916|gb|EFQ91133.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
          Length = 798

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 111/466 (23%), Positives = 171/466 (36%), Gaps = 120/466 (25%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
            + +T K   +F +D   L  L P    R T +  +++  +  II +G AY  ++  + F
Sbjct: 235 FTTLTKKYEARFNEDMRNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYSTSDGSVYF 294

Query: 155 DTSSIPN-----YGSFSRRKIDEQKMGTRVPE------KYHKKNPADFILWKRSTPMEPG 203
           D  +        Y         +  +               K+N +DF LWK S P EP 
Sbjct: 295 DIENFEKKEGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNDSDFALWKSSKPGEPA 354

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DRIEK 260
           W+SPWG GRPGWHIECS M+S  LG+  DIH GG+DL FPHH+NE+AQS      D   +
Sbjct: 355 WDSPWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYWQKDGGAQ 414

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
             N ++H G L++ G KMSKS  NF TI E L         W A  +R+  L+  + + I
Sbjct: 415 WVNYFLHMGHLSISGSKMSKSLKNFTTIREALSRGD-----WNARSLRIIFLLGGWHDGI 469

Query: 321 DFTVQRLTEAEILLSKW------------------------PQTSTSKGIIDPAVLSALY 356
           + T   + ++      +                         +   S       V SAL 
Sbjct: 470 EITPD-MRKSGSSWESYVTNFFYKVRDLEVHPNITSTATEDEKVLKSFESAKEKVHSALA 528

Query: 357 NDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKEHLNKNIS 406
           +  +T +A++A+  L  +               D+         I G++   +  +  I 
Sbjct: 529 DSFDTPTAMRAIASLITDYNSADKAGLSDSVSFDVARYITRMVRIFGLDGKADPYDGGIG 588

Query: 407 IA-----------IEKLVQERLILLK---------------------------------- 421
            A           +  + +ER  + +                                  
Sbjct: 589 WAGIDIPSAAKEHVYAVSRERDEVRQHAIAGDLSEDVLDSIISQHNATKQQDMDALPYAE 648

Query: 422 ------------------MKKF-SSADYIRKQ-LESKGFILEDYKN 447
                              K +    D +R   L   G  LED +N
Sbjct: 649 VLTTFQQNLKNLASKKAPAKDYLDLCDQLRDTHLWDLGIYLEDREN 694



 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 3/112 (2%)

Query: 4   KIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+K++N+L R   +F  IDP    ++ Y CGPTVYD AH+G+AR  +  D+L R+L +YY
Sbjct: 21  KLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVTNDILRRILAHYY 80

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           G   V +V+NITD+DDKII R RQ+H           +T +     +K    
Sbjct: 81  GYN-VKFVQNITDVDDKIILRGRQQHLLAKFKAENPTVTEEVIDTTIKAFDA 131


>gi|226324505|ref|ZP_03800023.1| hypothetical protein COPCOM_02288 [Coprococcus comes ATCC 27758]
 gi|225206953|gb|EEG89307.1| hypothetical protein COPCOM_02288 [Coprococcus comes ATCC 27758]
          Length = 259

 Score =  275 bits (703), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 90/272 (33%), Positives = 129/272 (47%), Gaps = 49/272 (18%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS  YLG+  DIH GG DLIFPHHENEIAQS  A+  E  A  W+HN FLN++ RKMSKS
Sbjct: 1   MSRKYLGEQIDIHAGGEDLIFPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---- 337
            GNF T+ E+ E        +   V+R  ML  HYR P++F+ + +  ++  L +     
Sbjct: 60  LGNFRTVREISE-------QYDLQVLRFFMLSAHYRSPLNFSAELMEASKNGLERILNAT 112

Query: 338 -------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
                               +  +           A+ +D NT  AI A+ +L + +   
Sbjct: 113 DNLKHLIASVAAEEMSAEEKEAFSKTDAYVEEFEKAMDDDFNTADAIAAIFELVKYANTT 172

Query: 379 HD----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
                       LL        +LG+ + K+   + +   IEKL++ER    K K F+ A
Sbjct: 173 ATAESSKEYLRGLLDRIVKLGDVLGLILDKKE--ELLDADIEKLIEERQAARKAKDFARA 230

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           D IR +L  KG IL+D +         +WK+K
Sbjct: 231 DAIRDELLEKGIILKDTR------EGVQWKKK 256


>gi|302508593|ref|XP_003016257.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
 gi|291179826|gb|EFE35612.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
          Length = 1165

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 114/423 (26%), Positives = 168/423 (39%), Gaps = 74/423 (17%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
              +T     +F++D   L  L P    RAT++IP++I  I+ II +G AY  ++  I F
Sbjct: 60  FRTLTRNFETRFLEDMRFLNVLDPDELTRATSYIPEIIQFIEKIIDNGFAYSTSDGSIYF 119

Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           +     N G+            + +     G+       K +  DF LW  S   EP W 
Sbjct: 120 NIDKFANAGNHYAKLEPWNRHNKHLQRDGEGSLSKNTTAKASKNDFALWNASRAGEPSWP 179

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
            PWG GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+ Q        +  N +
Sbjct: 180 GPWGNGRPGWHIECSAMASATLGSQIDIHSGGIDLAFPHHDNELPQGEAYWGETQWVNYF 239

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +H G L++ G KMSKS  NF  I   L    +  RS     +R+  L+  +RE I+ T  
Sbjct: 240 LHMGHLSIHGSKMSKSLKNFTAIGGALAKGTWTSRS-----VRIVFLLGRWREGIEITTD 294

Query: 326 RLTEA---EILLSKWPQTSTSKGIIDPAVLSALY----------ND-------------- 358
            +  A   E  L  +   + +       V S +           ++              
Sbjct: 295 MVNAARSWEAKLDNFFLKARNIAEGARWVTSMMNIFGLNGHASPDNPDIGWAGIDVPEYA 354

Query: 359 ---LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
              LNT   + AL    R   K++  +    A   I+        L  ++S      V+ 
Sbjct: 355 KPYLNT---LSALRDAVRRLAKSNAHITS-QALGSIINTIGSSADLGHSMSDLALPYVE- 409

Query: 416 RLILLKMKKFSSA---------------------DYIRK-QLESKGFILEDYKNPDNGQR 453
             +L K+K   ++                     D IR   +   G  LED  +     R
Sbjct: 410 --VLRKLKDQIASLIASLNIGTTEVDPNQLLRYCDRIRDVDILDLGIYLEDEDSGCAIIR 467

Query: 454 MTR 456
              
Sbjct: 468 PVT 470


>gi|167540088|ref|XP_001733555.1| cysteinyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165893955|gb|EDR22070.1| cysteinyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 405

 Score =  273 bits (699), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 96/247 (38%), Positives = 132/247 (53%), Gaps = 4/247 (1%)

Query: 50  FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE-RARQEHPSIPINDAISIITSKNTQQFV 108
           ++ ++  L  + G+        +TD+  K ++ R ++    I + +A      K  + F 
Sbjct: 102 YEKVFPTLDSFNGQNTTEVFARMTDVIGKYLDIRQKESVDPIEMKEAARAHARKYEELFF 161

Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
            D   L    P    R T  IP++I  IQ II +G+AYE+N  + FDT+S    G    R
Sbjct: 162 ADCDALGIRRPDVISRVTEFIPEVIAFIQKIIDNGYAYESNGSVYFDTASFRKAGMTYGR 221

Query: 169 KIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
            ++   +G    P    K N  DF LWK+S   EP WES WG GRPGWHIECSAM+S+  
Sbjct: 222 -LEPWSVGDVDAPADGEKHNKNDFALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVF 280

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   DIH GG DL FPHHENE+AQS      +      ++H G L++ G KMSKS  NFI
Sbjct: 281 GDTLDIHSGGEDLKFPHHENELAQSEAYFNKKESWVRYFLHTGHLHINGLKMSKSLKNFI 340

Query: 287 TINELLE 293
             N+LL+
Sbjct: 341 PSNKLLK 347



 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           +H+G+AR  +  D+  R+L  Y+G   V    NITD+DDKII +AR+             
Sbjct: 1   SHLGHARTYLSTDIFRRILEDYFG-YQVIQCMNITDVDDKIILKARKNLLISKYCTTTPK 59

Query: 99  ITSKNTQQFVK 109
           +     +   +
Sbjct: 60  VNDDTIKMMKE 70


>gi|242022617|ref|XP_002431736.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212517051|gb|EEB18998.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 728

 Score =  273 bits (698), Expect = 5e-71,   Method: Composition-based stats.
 Identities = 103/426 (24%), Positives = 167/426 (39%), Gaps = 96/426 (22%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            S ++      F KD + L  L P    R + +IP++I  I+ II +G AY +N  + FD
Sbjct: 203 FSSLSKFWESAFHKDMSDLNVLPPDVLTRVSEYIPEVIEYIKKIIDNGFAYHSNGSVYFD 262

Query: 156 TSSI-------------PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
            ++                YG     +  E  + +       KK+  DF LWK S   EP
Sbjct: 263 VANFDTNKKHFYAKLVPEAYGDSKSLQEGEGDLSSTDERTSEKKSINDFALWKNSKSGEP 322

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            WESPWGRGRPGWHIECS M+S   G   DIH GG+DL FPHH+NEIAQ+          
Sbjct: 323 WWESPWGRGRPGWHIECSVMASAICGSNIDIHTGGVDLKFPHHDNEIAQAEAYFGSNNWI 382

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N ++H+G L + G K+                     +   A  +R+A L+  +++ +D+
Sbjct: 383 NYFLHSGHLTISGCKIC-------------------IKKNSARQLRIAFLLHSWKDTLDY 423

Query: 323 TVQRLT---EAEILLS-----------------------KWPQTSTSKGIIDP----AVL 352
           + + +    + E LL+                       KW  +              + 
Sbjct: 424 SPKTMEMSVQYEKLLNEFFLNVKDLLRHFSKENECDFFVKWSDSELELNSKFENSKCRIH 483

Query: 353 SALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILGIEVCKEH 400
           SAL ++++T + +  +      +                ++         I G+   K  
Sbjct: 484 SALCDNIDTKTVLDIVRDTIGYTNVYLRDVKSPNMVLIQNIAQYLTKIFSIFGVIDFKNS 543

Query: 401 L------NKNISIAIEKLVQ------------ERLILLKMKK---FSSADYIRKQ-LESK 438
           +       +N+S + ++++              R     +K        D +R   L + 
Sbjct: 544 IGFSSSKGENVSASNDEVIMPYLNILSEFRDCVRKEAKILKSTTILQECDKLRDDILPNV 603

Query: 439 GFILED 444
           G  LED
Sbjct: 604 GVRLED 609



 Score =  135 bits (341), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 42/88 (47%), Positives = 56/88 (63%), Gaps = 1/88 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K+YN+  R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 20  LKLYNSFTRQKEIFIPNVGNRVLWYSCGPTVYDASHMGHARTYISFDILRRVLTEYFGYD 79

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPI 92
            V YV NITDIDDKII +ARQE+     
Sbjct: 80  -VQYVMNITDIDDKIIRKARQEYLFTEY 106


>gi|313678172|ref|YP_004055912.1| cysteine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950555|gb|ADR25150.1| cysteine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 413

 Score =  272 bits (695), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 130/435 (29%), Positives = 195/435 (44%), Gaps = 50/435 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP++ FD + +  R     K   +V NITD+DDKII +A  
Sbjct: 2   LKIYVCGPTVYNDPHIGNLRPIVTFDFMLKAYRELG--KEFKFVHNITDVDDKIINKA-- 57

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
               I ++   S + S   + + K   +L     +   + T++I  +   I  +   G+A
Sbjct: 58  ----IQLDIKESEVASYYFKSYQKILRKLNVNTISKIEKVTHNISYINKYINRLYESGNA 113

Query: 146 Y-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y + N  + FD     + YG  S + +D            HKK  ADF LWK ST +   
Sbjct: 114 YKDVNGNVWFDVLKNKDSYGVVSNQNLDNMVF---EENSLHKKFKADFALWK-STAVGIK 169

Query: 204 WESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           + S +G GRPGWH EC A+   + G    DIHGGG+DL FPHHENE  Q       +   
Sbjct: 170 FYSNFGAGRPGWHTECCALIDKHFGQNGVDIHGGGMDLTFPHHENENIQHYALYG-KPLT 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G LNL+G KMSKS GN I  N+ +        ++ A +++L          I+ 
Sbjct: 229 KEWIRCGQLNLDGEKMSKSVGNVILANDFIN-------AYGATILKLIFFNAKVSANINI 281

Query: 323 TVQRLTEAEILLSKWPQT-------------STSKGIIDPAVLSAL-------YNDLNTV 362
           T + +   E +  K+ +              S         VL AL       ++D N  
Sbjct: 282 TKELIENMEAIEIKYKKVLFKIFTLFKDKIISNEAYEKSEIVLKALESVSKLEFSDFNF- 340

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
                L+   R+  K+  L         IL +   KE  + N       +  +    + +
Sbjct: 341 ----QLNNEIRQFNKSPSL-ERAKDIFFILSL-FHKELTSINSYKKYLDIYDKWHYFIGI 394

Query: 423 KKFSSADYIRKQLES 437
           K + SAD +R++L  
Sbjct: 395 KDYKSADKLREKLIK 409


>gi|207109052|ref|ZP_03243214.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 242

 Score =  271 bits (693), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 84/245 (34%), Positives = 128/245 (52%), Gaps = 17/245 (6%)

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 1   YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 60

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 61  YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 118

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +E  A  W+HNGF+N+  
Sbjct: 119 SMIFKTLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINN 177

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN   I + L       +++   ++R  +L  HYR  ++F  + L  ++  L 
Sbjct: 178 EKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLD 230

Query: 336 KWPQT 340
           K  + 
Sbjct: 231 KIYRL 235


>gi|229100889|ref|ZP_04231693.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
 gi|228682468|gb|EEL36541.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
          Length = 254

 Score =  269 bits (689), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 84/270 (31%), Positives = 124/270 (45%), Gaps = 49/270 (18%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N++  KMSKS
Sbjct: 1   MARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GNFI +++++       + +   +IR  ML  HYR PI+F+ + L      L +     
Sbjct: 60  LGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAY 112

Query: 341 --------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
                                        A   A+ +D NT +AI  L+ +A  + +   
Sbjct: 113 GNLKHRMESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLL 172

Query: 379 ---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
                       +        ILG+E+ KE L   +   IE L+Q+R+   K + F+ +D
Sbjct: 173 EEHTSKVVIEAYVKQLETLFDILGLELAKEEL---LDEEIEALIQKRIEARKNRDFALSD 229

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  L+ +  ILED        + TRWK+
Sbjct: 230 QIRDDLKERNIILEDT------AQGTRWKR 253


>gi|255018754|ref|ZP_05290880.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 198

 Score =  268 bits (685), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 72/206 (34%), Positives = 115/206 (55%), Gaps = 8/206 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +      +   +  +  +    +  D  +L     +  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANE------LKLTVPEVADRFIGAYFDDVDQLNVAKASVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           PR T ++ ++I +I  +I  G+AYE+  ++ F T    +YG  S +++ E + G RV   
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYN 172

Query: 183 YHKKNPADFILWKRSTPMEPGWESPW 208
             K++  DF LWK + P E  WESP+
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPF 198


>gi|15828648|ref|NP_326008.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Mycoplasma
           pulmonis UAB CTIP]
 gi|61216356|sp|Q98R33|SYC_MYCPU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|14089590|emb|CAC13350.1| CYSTEINYL-TRNA SYNTHETASE (CYSTEINE--TRNA LIGASE) [Mycoplasma
           pulmonis]
          Length = 596

 Score =  267 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 121/452 (26%), Positives = 201/452 (44%), Gaps = 56/452 (12%)

Query: 6   KIYNTLERKITEFQ--AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           K+ N  +R   E +    +    ++Y+CGPTVYD  HIGN R ++V D++ R  +Y    
Sbjct: 185 KLSNFSQRYFEELRKNTKNEKIFKVYLCGPTVYDEVHIGNMRSVVVVDLIVRAQKYLG-- 242

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K   +V NITDIDDKIIER+      I    + + I+ K  +++ K   +    +    P
Sbjct: 243 KKTLFVHNITDIDDKIIERS------IQSKISENKISEKYFREYKKVLKKYRIKSIDKMP 296

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS-FSRRKIDEQKMGTRVPEK 182
           + T++I  ++  I ++   G+  + ++  +FD S I NYG   SR               
Sbjct: 297 KVTDNIDSIVKFINSLDKKGYVIQKDDGFVFDVSKIKNYGKRLSR--------------- 341

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLI 241
             KK   +F LWK +T     +      GRPGWH EC+         +  DIH GG+DL 
Sbjct: 342 EDKKQVENFYLWKSTTKG-VQYNYNGFLGRPGWHSECTLFIDDIFNSQTLDIHAGGIDLT 400

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           FPHHENE AQ    + ++     W+H G +  + +KMSKS GN I   +           
Sbjct: 401 FPHHENENAQYIAKNDVK-ITKHWLHVGQVMFKNQKMSKSLGNVILAKD----------- 448

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAV 351
           +   + ++ ++ +    PI  T + +  A+++++K+ +                 +   V
Sbjct: 449 FDEDIFKIILINSSVTAPIYITNELIENAKVIINKYKKLYFKFLNLSLSFNFDDNVRYMV 508

Query: 352 LSALYNDLNTVSAIQALHKLARESTKN--HDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                 D ++ +    L++  +    +   D L I ++  H L      E + K+     
Sbjct: 509 RKIADKDFSSFNL--KLNEYIKAYNTSLEADKLTIVSSVIHFLNFSFI-EQIEKDFRKN- 564

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
           +K+       LK K +  AD  RK L  +G I
Sbjct: 565 KKIYDIWQGFLKQKNYEKADMFRKILIDQGLI 596


>gi|296418824|ref|XP_002839025.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635019|emb|CAZ83216.1| unnamed protein product [Tuber melanosporum]
          Length = 718

 Score =  266 bits (681), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 118/444 (26%), Positives = 173/444 (38%), Gaps = 113/444 (25%)

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           +  S +TS     F +D   L  L PT   R +  IP+ +  ++ ++  G AY       
Sbjct: 194 EVFSKLTSYWENHFNEDMATLNVLPPTTVTRVSEFIPENVAFVKKLVDRGFAYPT----- 248

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR---STPMEPGWESPWGR 210
            D SS+   G  S                  KK P DF LWK      P EP W+SPWG+
Sbjct: 249 ADGSSLIADGEAS------------------KKTPQDFALWKAFKAEKPGEPSWDSPWGK 290

Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC-----------ADRIE 259
           GRPGWHIECS M S  LG   DIH GG+DL FPHH+NEIAQS             AD   
Sbjct: 291 GRPGWHIECSVMCSEVLGGQVDIHSGGIDLAFPHHDNEIAQSEAYWDGCCDTPKTADGKH 350

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
           +  N ++H G L++ G KMSKS  NF++I + L         W    +R+  L+  +R+ 
Sbjct: 351 QWVNYFLHMGHLSIHGSKMSKSLKNFVSIRDALTRGG-----WTPRGLRVVFLLGGWRDG 405

Query: 320 IDFTVQRLTEA---EILLSKW------------------PQTSTSKGIIDPAVL------ 352
           I+     L EA   E  ++K+                   +     G ++ A+       
Sbjct: 406 IEVREGVLMEAKSWETTVAKFFSNVKALIAEEEEEEKKGNRAKQLFGPLEHAIYKDLDTA 465

Query: 353 -----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------ILGIEVC 397
                +AL +  NT +A++AL  L   + K         A             I G++  
Sbjct: 466 RQNLHTALCDSFNTPTAMKALTDLIGSTNKYMSRTKSLAAVKEIARWVTRIVTIFGLDST 525

Query: 398 KEHLNKN----------ISIAIEKLV-----------QERLILLKM-KK------FSSAD 429
                 +           + A + L+             R + +   K          +D
Sbjct: 526 STPNGSDRIGWADSATSSTGAEDILLPYLRTLSTFRDNVRTLAISSPKDTISKDILLLSD 585

Query: 430 YIRK-QLESKGFILEDYKNPDNGQ 452
            +R   L S G  L+D ++     
Sbjct: 586 RLRDHDLASLGVALDDRESAKGAP 609



 Score =  129 bits (325), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 49/100 (49%), Positives = 62/100 (62%), Gaps = 3/100 (3%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             + IYN+L R+   F  IDPS   I  Y CGPTVYD  H+G+AR  +  DVL R+LR Y
Sbjct: 23  PPLHIYNSLTREKNVFVPIDPSGRRITWYCCGPTVYDAGHLGHARNYVTTDVLRRILRDY 82

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           +G   V +V+N+TD+DDKII RARQ+H         S IT
Sbjct: 83  FG-FDVQFVQNVTDVDDKIILRARQQHLLEEFISRNSSIT 121


>gi|148377308|ref|YP_001256184.1| cysteinyl-tRNA synthetase (cysteine-trnaligase) [Mycoplasma
           agalactiae PG2]
 gi|148291354|emb|CAL58737.1| Cysteinyl tRNA synthetase (Cysteine tRNAligase) [Mycoplasma
           agalactiae PG2]
          Length = 413

 Score =  265 bits (677), Expect = 1e-68,   Method: Composition-based stats.
 Identities = 121/436 (27%), Positives = 195/436 (44%), Gaps = 52/436 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP+I FD + +  R     K   +V NITD+DDKII +A  
Sbjct: 2   LKIYVCGPTVYNEPHIGNLRPIITFDFMLKAYREL--NKEFKFVHNITDVDDKIINKA-- 57

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
               I ++   S + S   + + +    L     +   + T +I  +   ++ +    +A
Sbjct: 58  ----IQMDVKESEVASFYFKSYQRLLRMLNVNTISKIEKVTKNINVINKYVEKLYQTENA 113

Query: 146 Y-EANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +AN  + FD   +  NYG  S + ID             K+   DF LWK ST +   
Sbjct: 114 YKDANGNVWFDVLRNKGNYGLVSNQNIDNMVF---DENSLLKRFKGDFALWK-STAVGIK 169

Query: 204 WESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           + S +G GRPGWH ECSA+   + G    DIHGGG+DL FPHHENE  Q       ++ A
Sbjct: 170 FRSSFGMGRPGWHTECSALIDKHFGSDGVDIHGGGMDLTFPHHENENIQHYALY-QKQLA 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G LNL+  KMSKS GN I   + +         + A +++L          I+ 
Sbjct: 229 KEWIRCGQLNLDCEKMSKSVGNVILAEDFIN-------KYGAAILKLIFFNAKVSASINI 281

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN---------TVSAIQALHKL-- 371
           T + +   + + +K+ +      ++    ++     LN            A++A+ +L  
Sbjct: 282 TSELIENMKAIENKYKK------VLFKIFINYKNEILNRENYSKSEFVTKALEAVSQLEF 335

Query: 372 ----------ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
                      ++  K   L         +L +   KE  N +      ++  +    + 
Sbjct: 336 SDFNFMLNNEIKQFNKEPSL-ERAKDLFFLLSL-FHKELTNISFYNRYLEIYDQWRYFIG 393

Query: 422 MKKFSSADYIRKQLES 437
           +K +  AD +R++L  
Sbjct: 394 IKDYKKADKLREKLIK 409


>gi|171690590|ref|XP_001910220.1| hypothetical protein [Podospora anserina S mat+]
 gi|170945243|emb|CAP71354.1| unnamed protein product [Podospora anserina S mat+]
          Length = 780

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 102/357 (28%), Positives = 153/357 (42%), Gaps = 63/357 (17%)

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDT 156
            ++ K  ++F +D   L  L P    R T ++ Q++  ++ I+ +G  Y   +  + FD 
Sbjct: 221 ELSQKFERRFFEDMDALNVLPPDQLTRVTEYVRQIVDFVEKIVANGFGYATPDGSVYFDI 280

Query: 157 SSIPNYGSFSRRKIDEQK----------MGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
            S    G  S  +++              G+       K++P  F LWK S P EP W+S
Sbjct: 281 DSFEKAG-HSYSRLEPWNKNDPALLADGEGSLSKGASMKRSPNHFALWKASKPGEPAWDS 339

Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA----DRIEKTA 262
           PWGRGRPGWHIECSAM+S  +GK  DIH GG+DL FPHH+NE+AQS       D   + A
Sbjct: 340 PWGRGRPGWHIECSAMASEAIGKTMDIHSGGVDLRFPHHDNELAQSEAYWSTPDCHVQWA 399

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           N +IH G L       SKS  N+ TI  +L       + W A  +R+  L+  +++ I+ 
Sbjct: 400 NYFIHMGQL-------SKSLKNYTTIRSVL-----SEKDWTARSLRICFLLMPWQDGIEV 447

Query: 323 TVQRLTE---AEILLSKW------------------------PQTSTSKGIIDPAVLSAL 355
           T + +      E  L+ +                         Q   S       V +AL
Sbjct: 448 TDELMKAVIGWEGKLNNFLLKSLDLSKHTRPNAEGQDIGVADQQLLKSLEKAKADVDNAL 507

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH--------ILGIEVCKEHLNKN 404
            +  N  S ++ L  L  E+     L      S          I G++   +  N  
Sbjct: 508 CDSFNISSVMRILSDLVTEANSAEKLADETVLSLARWVTRIVTIFGLDPEGDLTNSE 564



 Score =  119 bits (300), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 3/96 (3%)

Query: 5   IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           +KIYN+L R   +F  +DP+   +  Y CGPTVY+ AH+G+A+  +  D++ R++R Y+G
Sbjct: 14  LKIYNSLTRTKNDFIPVDPTGEVVTWYACGPTVYEDAHLGHAKNYVSTDIIRRIMRDYFG 73

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            + V +V N TDIDDKII +AR++H         + 
Sbjct: 74  FR-VKFVMNTTDIDDKIILQARRQHLLARFKHQHAE 108


>gi|330939693|gb|EGH42992.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 187

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 80/192 (41%), Positives = 119/192 (61%), Gaps = 9/192 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IYNTL +    F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+   E 
Sbjct: 2   LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITDIDDKII RAR+        ++   +T++  +   +D  RL  L P  +PR
Sbjct: 61  -LTYVRNITDIDDKIINRAREN------GESFDALTARMIEAMHEDEARLNILKPDMEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
           AT+HIP M  +IQ +I  G+AY   N ++ +       YG  SR+KI++ ++G R+    
Sbjct: 114 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 173

Query: 184 HKKNPADFILWK 195
            K++P DF+LWK
Sbjct: 174 SKEDPLDFVLWK 185


>gi|291319975|ref|YP_003515233.1| cysteinyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752304|emb|CBH40275.1| Cysteinyl tRNA synthetase (Cysteine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 413

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 121/436 (27%), Positives = 194/436 (44%), Gaps = 52/436 (11%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +++YVCGPTVY+  HIGN RP+I FD + +  R     K   +V NITD+DDKII +A  
Sbjct: 2   LKIYVCGPTVYNEPHIGNLRPIITFDFMLKAYREL--NKEFKFVHNITDVDDKIINKA-- 57

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
               I ++   S + S   + + +    L     +   + T +I  +   ++ +    +A
Sbjct: 58  ----IQMDVKESEVASFYFKSYQRLLRMLNVNTISKIEKVTKNINVINKYVEKLYQTENA 113

Query: 146 Y-EANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           Y +AN  + FD      NYG  S + ID             K+   DF LWK ST +   
Sbjct: 114 YKDANGNVWFDVLKNKSNYGLVSNQNIDNMVF---DENSLLKRFKGDFALWK-STAVGIK 169

Query: 204 WESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           + S +G GRPGWH ECSA+   + G    DIHGGG+DL FPHHENE  Q       ++ A
Sbjct: 170 FRSSFGMGRPGWHTECSALIDKHFGSDGVDIHGGGMDLTFPHHENENIQHYALY-QKQLA 228

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             WI  G LNL+G KMSKS GN I   + +         + A +++L          I+ 
Sbjct: 229 KEWIRCGQLNLDGEKMSKSVGNVILAEDFIN-------KYGAAILKLIFFNAKVSASINI 281

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN---------TVSAIQALHKL-- 371
           T + +   + + +K+ +      ++    ++     LN             ++A+ +L  
Sbjct: 282 TSELIENMKAIENKYKK------VLFKIFVNYKNEILNKENYSKSEFVTKGLEAVSQLEF 335

Query: 372 ----------ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
                      ++  K   L         +L +   KE  N +      ++  +    + 
Sbjct: 336 SDFNFMLNNEIKKFNKEPSL-ERAKDLFFLLSL-FHKELTNISFYNRYLEIYDQWRYFIG 393

Query: 422 MKKFSSADYIRKQLES 437
           +K +  AD +R++L  
Sbjct: 394 IKDYKKADKLREKLIK 409


>gi|299751746|ref|XP_002911681.1| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298409516|gb|EFI28187.1| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 801

 Score =  264 bits (675), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 117/464 (25%), Positives = 171/464 (36%), Gaps = 115/464 (24%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
             +     F +D   L  L PT   R +  IP+ I  +Q II +G AY      + FD  
Sbjct: 233 YAAYWENHFNEDLRTLNILPPTVTTRVSEFIPENIAFVQQIIDNGFAYAIPGGTVYFDVD 292

Query: 158 SIPNYGSFS------RRKIDEQKM-----------------GTRVPEKYHKKNPADFILW 194
           +    G +        RK + ++                       EK  K++P DF LW
Sbjct: 293 AFERAGHYYAKLEPGNRKGEAKQEEDTPAVEAPTNVATTSEAEIQNEKAQKRSPRDFALW 352

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
           K+S   EPGWESPWG GRPGWHIECSAM+S  LG  FDIH GG+DL FPHH+NE+AQS  
Sbjct: 353 KKSRVGEPGWESPWGYGRPGWHIECSAMASQVLGAQFDIHSGGIDLAFPHHDNELAQSEA 412

Query: 255 ADRIEK--------TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
                           N +IH G L++ G KMSKS  NFI+I + L +  +  R      
Sbjct: 413 YWHKNPKESRGPVQWVNYFIHMGHLSIAGSKMSKSLKNFISIRDALASGDWTARK----- 467

Query: 307 IRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKGIIDPA--VLS- 353
           +R+  +M  ++  ++ +           + +T     +    + S + G   P     S 
Sbjct: 468 LRILFMMGGWKGGLEISQNFRAEVDLWEKTVTNFFSNVEALTRESETSGGPRPRHLFRSQ 527

Query: 354 -----------------ALYNDLNTVSAIQALHKLARESTKN------------------ 378
                            AL +  NT SA+  +  L  ++                     
Sbjct: 528 EKQLFTDLETAQKDLHVALCDSFNTGSALSTILDLISKTNTYLKENQKSASNPDAYFSLT 587

Query: 379 --HDLLPIFNASAHILGIEVC----------------KEHLNKNISIAIEKLVQERLI-- 418
              ++         I G+                    ++        ++ L + R    
Sbjct: 588 AVREVARWVTKMLRIFGLSTSADLIGWGTDAPAGPDGAQNKEAVALPYVQALSRFRDQVK 647

Query: 419 --LLKMK-------KFSSADYIR-KQLESKGFILEDYKNPDNGQ 452
              L  K            D +R  QL   G  LED  +     
Sbjct: 648 SLALVNKTIPVCQELLQLCDSLRDDQLLHLGVSLEDRDSSIGEP 691



 Score =  126 bits (318), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 3/85 (3%)

Query: 5   IKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           + +YN+L +  T F  +DPS   +  Y CGPTVYD  H+G+AR  +  DVL R++R Y+G
Sbjct: 24  LVLYNSLTKTKTPFIPVDPSGRKVTWYCCGPTVYDAGHLGHARNYLTTDVLRRIMRDYFG 83

Query: 63  EKCVTYVRNITDIDDKIIERARQEH 87
            + V +V+N+TD+DDKII+RAR++H
Sbjct: 84  YE-VEFVQNVTDVDDKIIKRAREQH 107


>gi|196019398|ref|XP_002118971.1| hypothetical protein TRIADDRAFT_62948 [Trichoplax adhaerens]
 gi|190577490|gb|EDV18543.1| hypothetical protein TRIADDRAFT_62948 [Trichoplax adhaerens]
          Length = 257

 Score =  264 bits (674), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 95/256 (37%), Positives = 140/256 (54%), Gaps = 15/256 (5%)

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
             + SPW  GRPGWHIECS MS  YLG  FDIHGGG+DL+F HHENEIAQS C  +  K 
Sbjct: 1   MFFASPWSDGRPGWHIECSVMSKKYLGDNFDIHGGGIDLVFXHHENEIAQSVCESKSNKF 60

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
           AN W+HNGFL +   KMSKS  NFIT+ ELL+    G        +R   L  +YR+P+D
Sbjct: 61  ANYWVHNGFLTVNSEKMSKSLKNFITVKELLDKGVGGAE------LRYFYLTANYRKPLD 114

Query: 322 FTVQRLTEAEILLSKWPQTSTSKGI--------IDPAVLSALYNDLNTVSAIQALHKLAR 373
           F  + L +++  +SK+ +      I        +    L  + +DLNT  A+  +H+LA 
Sbjct: 115 FNEKALLDSKKSISKFQKCIQKFNIKFDEISYELPDEFLKYISDDLNTPLALSFIHQLAN 174

Query: 374 ESTK-NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
           ++   N +           LG+++ ++  +  I+  +  L ++R  L   K +  AD +R
Sbjct: 175 KALDGNENSANDVYNCCKFLGLDIKEKEEDIYITQEVINLAEKRKQLKIDKNWQEADKVR 234

Query: 433 KQLESKGFILEDYKNP 448
            ++E  G+ + D K+ 
Sbjct: 235 IEIEKLGYKVIDIKDG 250


>gi|226324504|ref|ZP_03800022.1| hypothetical protein COPCOM_02287 [Coprococcus comes ATCC 27758]
 gi|225206952|gb|EEG89306.1| hypothetical protein COPCOM_02287 [Coprococcus comes ATCC 27758]
          Length = 211

 Score =  262 bits (670), Expect = 9e-68,   Method: Composition-based stats.
 Identities = 76/199 (38%), Positives = 110/199 (55%), Gaps = 11/199 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++NTL +K  EF  ++   +RMYVCGPTVY++ HIGNARPMIVFD + R   Y   + 
Sbjct: 1   MKVFNTLTKKKEEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDKII++A +E        +   I+ +   +  KD   +     T  P 
Sbjct: 60  -VNYVSNFTDVDDKIIKKAIEEQV------SAQEISQRYIAECKKDMAGMNVKPATKHPL 112

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
           AT  I  M+ +I  +I  G+AYE N  + F T    +YG  S + +D+ + G R   V  
Sbjct: 113 ATEEICGMVEMISELIDKGYAYEKNGTVYFSTRKFKDYGKLSHKNLDDLRSGGRSLLVSG 172

Query: 182 KYHKKNPADFILWKRSTPM 200
           +  K++P DF+LWK     
Sbjct: 173 EDEKEDPLDFVLWKPKKKE 191


>gi|12862152|dbj|BAB32367.1| unnamed protein product [Mus musculus]
          Length = 276

 Score =  259 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 13/227 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 40  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 99

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 100 GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 152

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  
Sbjct: 153 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAE 208

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECS M+   
Sbjct: 209 PGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMARAL 255


>gi|148690119|gb|EDL22066.1| mCG11180, isoform CRA_b [Mus musculus]
          Length = 270

 Score =  258 bits (660), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 83/227 (36%), Positives = 120/227 (52%), Gaps = 13/227 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRV 179
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG      ++     T  
Sbjct: 147 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL----VNTVPSATAE 202

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
           P    K++ +DF LWK + P E  W SPWG GRPGWHIECS M+   
Sbjct: 203 PGDSDKRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMARAL 249


>gi|284990719|ref|YP_003409273.1| cysteine--tRNA ligase [Geodermatophilus obscurus DSM 43160]
 gi|284063964|gb|ADB74902.1| Cysteine--tRNA ligase [Geodermatophilus obscurus DSM 43160]
          Length = 391

 Score =  257 bits (656), Expect = 4e-66,   Method: Composition-based stats.
 Identities = 103/346 (29%), Positives = 162/346 (46%), Gaps = 19/346 (5%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
            R+YVCG T YD  H+G+A   +  DVL  +LR    +   +  RN+TD+DD +   A  
Sbjct: 42  ARVYVCGITPYDVTHLGHAATFVWADVLGSVLRLAGADVVTS--RNVTDVDDVLTRAADA 99

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                                F +D   L    PTH PRA +H+  +  L   ++  G A
Sbjct: 100 RGRH------FDEFALGQEFAFEQDLRALGVRPPTHVPRARHHVTHVQQLAAALLQAGRA 153

Query: 146 YEANNEIIFDTSSIPNYGSF-SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
           YE    + F  + +       + R  +        P+   +++P D  +W+ S   +P W
Sbjct: 154 YEREGHVFFRGAGVVGASGLDAGRARELAAEFGDDPDDPLREDPFDVPVWRPSGERDPAW 213

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
            SPWG GRPGWH EC+AM++  LG+  D+  GG DL FPHH ++ A +  A  +   A  
Sbjct: 214 PSPWGWGRPGWHAECAAMATATLGRGVDVLVGGADLAFPHHAHQAAMAEAASGVAPFARS 273

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
            +H G ++ +G KM+KS GN   +++LL       R    PV+RL +L   + +P ++  
Sbjct: 274 RVHVGAVSQDGAKMAKSTGNLTLVSDLL-------RGTTGPVLRLLVLDRPWSQPWEYRP 326

Query: 325 QRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYNDLNTVSAIQA 367
           + L  A   L +    +   G       AV+  L +DL+  +A+  
Sbjct: 327 ELLETASARLDELFAAAGRPGSSPAASRAVVDRLLDDLDVSAALDV 372


>gi|315124323|ref|YP_004066327.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018045|gb|ADT66138.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 240

 Score =  256 bits (654), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 87/239 (36%), Positives = 132/239 (55%), Gaps = 16/239 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++ +++ ++      +D  +I +Y+CGPTVYD AH+G+AR  + FD+L R+L       
Sbjct: 1   MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQG--N 55

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V + RN TDIDDKI+++             +  IT    + + +D   L  L P  +PR
Sbjct: 56  RVKFARNYTDIDDKILKK------MAQSGQTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT++I  M+ LI+ +   G  Y   + I FDTS    Y S S R ++E    +R+  +  
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENI--SRLSNEVQ 167

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           K+N +DF+LWK     E  +ES +G+GRPGWH EC AM         DIH GG+DL+FP
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFP 223


>gi|168071075|ref|XP_001787045.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162659850|gb|EDQ48141.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 315

 Score =  255 bits (652), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 42/256 (16%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M   YLG   DIH GG DL FPHHENEIAQS      +  AN W+HNG++N++  KMSKS
Sbjct: 1   MVRKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFANYWMHNGYINIDNEKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNFIT+N++++            V+R  ML  HYR PI+++ + L      L +   + 
Sbjct: 60  LGNFITVNDIIKIH-------DPQVLRFFMLSVHYRNPINYSEEVLENTRAGLERIRTSY 112

Query: 342 TSK---------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
            +                        +    + ++ +D NT + I  L +L++++     
Sbjct: 113 ENLKHRSTASTDLTDTNDEWIAKIADLRKQFVESMDDDFNTANGISVLFELSKQANYYLL 172

Query: 379 ---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
                    H  +  F     +LG+ +  +    +  I    L+++R    K + F+ AD
Sbjct: 173 EKTTSPAVIHAFMKEFEELFAVLGLSLSSDEELLDEEIE--ALIEKRTQARKDRDFALAD 230

Query: 430 YIRKQLESKGFILEDY 445
            IR QL++   ILED 
Sbjct: 231 QIRDQLKAMNIILEDT 246


>gi|16518968|gb|AAL25085.1| CysS [Wolbachia sp. wMelPop]
          Length = 204

 Score =  254 bits (649), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 95/211 (45%), Positives = 139/211 (65%), Gaps = 12/211 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +++YNTL +K   F  ID  +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ 
Sbjct: 2   VRLYNTLTKKKELFTPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYGK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VTYVRNITDIDDKII  A ++      N  I  I++  T+ F +D   + C  PTH+P+
Sbjct: 61  -VTYVRNITDIDDKIINAASEK------NSNIESISTYYTKAFHEDMRSINCAEPTHEPK 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           AT ++  +I LI++++  GHAYE++  + F+  S   YG+ S +K DE   G+RV    +
Sbjct: 114 ATKNVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNEN 173

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRG 211
           KK+P DF+LWK +  ++      W SPWG G
Sbjct: 174 KKHPGDFVLWKPANDIDYKLSSYWNSPWGEG 204


>gi|149057587|gb|EDM08830.1| rCG43187, isoform CRA_d [Rattus norvegicus]
          Length = 241

 Score =  252 bits (644), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 88/204 (43%), Positives = 118/204 (57%), Gaps = 12/204 (5%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
              +ITD+DDKII+RA +      +N + + + S   ++F +D   L  L PT   R T 
Sbjct: 1   MAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTVYLRVTE 54

Query: 128 HIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHK 185
           +IPQ+I  IQ II HGHAY  A   + FD  +  + YG      ++     T  P    K
Sbjct: 55  NIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKL----VNTVPSATAEPVDSDK 110

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++ +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+DL FPHH
Sbjct: 111 RHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAFPHH 170

Query: 246 ENEIAQSCCADRIEKTANIWIHNG 269
           ENEIAQS    + ++  N ++H+G
Sbjct: 171 ENEIAQSEVFHQCQQWGNYFLHSG 194


>gi|229077385|ref|ZP_04210045.1| hypothetical protein bcere0023_1000 [Bacillus cereus Rock4-2]
 gi|228705919|gb|EEL58245.1| hypothetical protein bcere0023_1000 [Bacillus cereus Rock4-2]
          Length = 254

 Score =  252 bits (643), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 81/270 (30%), Positives = 119/270 (44%), Gaps = 49/270 (18%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M+  YLG   DIH GG DL FPHHENEIAQS      +  A  W+HNG++N+   KMSKS
Sbjct: 1   MARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT- 340
            GNFI +++++       + +   +IR  ML  HYR PI+F+ + L      L +     
Sbjct: 60  LGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAY 112

Query: 341 --------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
                                        A   A+ +D NT +AI  L+ +A  + +   
Sbjct: 113 GNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLL 172

Query: 379 ---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
                       +        ILG+E+ KE L       +    Q+R+   K + F+ +D
Sbjct: 173 EEHTSKVVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSD 229

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            IR  L+ +  ILED        + TRWK+
Sbjct: 230 QIRDDLKERNIILEDT------AQGTRWKR 253


>gi|2145826|pir||S72854 cysteine-tRNA ligase (EC 6.1.1.16) - Mycobacterium leprae
 gi|467009|gb|AAA17194.1| syC [Mycobacterium leprae]
          Length = 241

 Score =  251 bits (642), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 82/242 (33%), Positives = 120/242 (49%), Gaps = 15/242 (6%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           MYVCG T YD  H+G+A   + FD+++RL      E  V YV+N+TD+DD + ERA +  
Sbjct: 1   MYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGHE--VHYVQNVTDVDDPLFERADRN- 57

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                      +  +    F  D   L  L P     AT  I +++ L+  +++ G AY 
Sbjct: 58  -----GVDWRDLAEREVALFRDDMASLRILPPHDYVAATETIVEIVELVDKMLVSGAAYV 112

Query: 148 ANN---EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPM 200
            ++   +I F   +   +G  S    D      +     P +  K    D +LW+ + P 
Sbjct: 113 IDDEYPDIYFRADATLQFGYESGYDRDTMLRLYEQSGGDPRRPGKNGELDALLWRAARPG 172

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE   A + C     +
Sbjct: 173 EPSWSSPFGPGRPGWHVECAAIALSRIGIGLDIQGGGSDLIFPHHEFTAAHAECVRGERR 232

Query: 261 TA 262
            A
Sbjct: 233 FA 234


>gi|323651392|gb|ADX97542.1| cysteinyl-tRNA synthetase [Courdo11 virus]
          Length = 283

 Score =  249 bits (637), Expect = 7e-64,   Method: Composition-based stats.
 Identities = 92/286 (32%), Positives = 133/286 (46%), Gaps = 30/286 (10%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           + I MYVCGPTVY+ +HIG+AR  ++ D++ R +     +     V NITDIDDKII+ A
Sbjct: 3   NTINMYVCGPTVYNDSHIGHARIYVMVDIINRTMTNILNQD-THLVMNITDIDDKIIKAA 61

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
             +        +   ++ K   +F +   +L    P    R +  I  +I  IQ II + 
Sbjct: 62  NDQLV------SWKTLSKKYEDKFFESMAKLGVAKPDVVIRVSESIDDIIKYIQQIINND 115

Query: 144 HAYEA-NNEIIFDTSSIPNYGSF--SRRKIDEQKMGTRVPEK--YHKKNPADFILWKRST 198
            AY   +  + FDT    N G        I+EQ   +++  +    K++  DF LWK   
Sbjct: 116 FAYVTFDGSVYFDTIKYVNAGYILDCDIDIEEQTYESQIASEIINEKRHIKDFALWKNRA 175

Query: 199 PMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
             + G+   +          G PGWHIECSAM    +G   +IH GG+DL FPHH NE  
Sbjct: 176 DYDVGFFVEFIFNNSIIKTYGVPGWHIECSAMIERTIGDSVNIHFGGIDLKFPHHHNECL 235

Query: 251 QSCCADR----------IEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           Q+                EK    +IH G L +EG+K  +    F 
Sbjct: 236 QANAYYHPKYKPNTNINTEKWTQEFIHVGHLCVEGQKNVQVTQKFF 281


>gi|197693918|gb|ACH71628.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  248 bits (633), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 127/226 (56%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N ++  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIALVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M S  L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMISKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|149057585|gb|EDM08828.1| rCG43187, isoform CRA_b [Rattus norvegicus]
          Length = 385

 Score =  247 bits (631), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 99/349 (28%), Positives = 149/349 (42%), Gaps = 85/349 (24%)

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++ +DF LWK + P E  W SPWG GRPGWHIECSAM+S   G   DIH GG+D
Sbjct: 39  AVDSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGID 98

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKF 297
           L FPHHENEIAQS    + ++  N ++H+G L+++G   KMSKS  N+ITI + L+T   
Sbjct: 99  LAFPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFLQT--- 155

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
               +   V RL  L T+YR  ID++   L EA  LL                       
Sbjct: 156 ----FSPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPV 211

Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------- 379
                         AV +AL ND +T  A+ ++  L   + +                  
Sbjct: 212 GEDVLWERLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVF 271

Query: 380 -DLLPIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKMKKFSSA---- 428
             ++         +GI + K      +     +   +++LV+ RL + +   ++ A    
Sbjct: 272 GAIVAYVEQFFETVGISLAKRQCVSGDSSTVALHCVVDELVRFRLKVRQ---YALATPGA 328

Query: 429 -------------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                              D +R+ L + G  ++D      G   + W+
Sbjct: 329 TGEARKQQLQERQPLLEACDALRQDLMTHGINVKD-----RGHAASTWE 372


>gi|197693882|gb|ACH71610.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  247 bits (630), Expect = 4e-63,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ H+ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693960|gb|ACH71649.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  246 bits (629), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 127/226 (56%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693930|gb|ACH71634.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  246 bits (628), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSMHN--SSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGSDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693878|gb|ACH71608.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693934|gb|ACH71636.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693936|gb|ACH71637.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693938|gb|ACH71638.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693942|gb|ACH71640.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693900|gb|ACH71619.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 127/226 (56%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693948|gb|ACH71643.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693920|gb|ACH71629.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|156603446|ref|XP_001618835.1| hypothetical protein NEMVEDRAFT_v1g224771 [Nematostella vectensis]
 gi|156200573|gb|EDO26735.1| predicted protein [Nematostella vectensis]
          Length = 475

 Score =  245 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 72/179 (40%), Positives = 109/179 (60%), Gaps = 9/179 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + IYNTL +    F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+   
Sbjct: 2   PMLSIYNTLTKSKEAFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGY 61

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +TYVRNITDI+DKII RAR+        +   ++T +      +D  RL  L P  +
Sbjct: 62  D--LTYVRNITDIEDKIINRAREN------GEPFDVLTERMIAAMHEDEARLNILKPDME 113

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           PRAT+HIP M+ +IQ +I  G+AY   N ++ +  +    YG  SR+KI++ ++G R+ 
Sbjct: 114 PRATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIE 172


>gi|197693898|gb|ACH71618.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (627), Expect = 8e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSIEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693888|gb|ACH71613.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693912|gb|ACH71625.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (627), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E        +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESK------SIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|261884433|ref|ZP_06008472.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 241

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 86/241 (35%), Positives = 128/241 (53%), Gaps = 17/241 (7%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           IY+++ ++  EF+ I      +YVCG  VYD AH+G+A+  I FD+L R L+    +  V
Sbjct: 3   IYDSILKQKVEFKPIREDEANIYVCGHPVYDDAHLGHAKSSISFDLLRRTLKSLGYK--V 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            +++N TDIDD+I+++            ++  IT+    ++  D   L       +P+AT
Sbjct: 61  KFIKNFTDIDDEILKK------MSQPGKSLEDITNHYISRYKADMYALNVADADIEPKAT 114

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +  +I  I  +  +G AY+ ++ I FDTS    Y S S RK +      RV  K  KK
Sbjct: 115 TSLTSIINYIPTLFENGWAYKIDDGIYFDTSKDDKYLSLSGRKDENLI--ARVASKDEKK 172

Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GK---VFDIHGGGLDLIF 242
           +  DF+LWK     E  ++SP+GRGRPGW  EC AM   +  G      DIH GG DL+F
Sbjct: 173 DEKDFVLWKF---DENWYDSPFGRGRPGWRSECVAMIKDHFCGSYEFEIDIHAGGADLLF 229

Query: 243 P 243
           P
Sbjct: 230 P 230


>gi|197693894|gb|ACH71616.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  SMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGTDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693886|gb|ACH71612.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVSMIKTLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693906|gb|ACH71622.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693910|gb|ACH71624.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (626), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVSMIKTLLEKNIAYRISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIALVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693952|gb|ACH71645.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693892|gb|ACH71615.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ H+ 
Sbjct: 1   DFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGTDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693924|gb|ACH71631.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 86/226 (38%), Positives = 124/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E        +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKESK------SIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  SMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693914|gb|ACH71626.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693922|gb|ACH71630.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|197693926|gb|ACH71632.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693944|gb|ACH71641.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  245 bits (625), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693932|gb|ACH71635.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S     + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKE------NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693880|gb|ACH71609.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ H+ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|294921527|ref|XP_002778678.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239887397|gb|EER10473.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 451

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 99/332 (29%), Positives = 140/332 (42%), Gaps = 66/332 (19%)

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
                K++  DF LWK S   EP WESPWG GRPGWHIECS M+S  LG   DIHGGG D
Sbjct: 10  DFGSEKRHRNDFALWKSSKRGEPSWESPWGLGRPGWHIECSVMASEVLGAHIDIHGGGSD 69

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
           L FPHH+NEIAQS       +  N ++H G L+++G KMSKS  NFITI + L       
Sbjct: 70  LKFPHHDNEIAQSEAYHFNAQWVNYFLHAGHLHIKGLKMSKSLKNFITIRQAL------- 122

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE-----------------------ILLSK 336
           +S+ A  +R+  L+  + +PI+F+ Q + EA+                        +  K
Sbjct: 123 QSYTARQLRIMFLLQQWDKPINFSDQTIAEAKDKETRFNSFFNRVKELLRTRPPYSIRQK 182

Query: 337 WPQTSTSKGIIDP------AVLSALYNDLNTVSAIQALHKLARESTKN------------ 378
           W + S    I +       AV  AL ++ NT  A+  L  +                   
Sbjct: 183 WEEESLDFAINEQIATAMAAVHEALCDNFNTSEAMTQLDNIVTAVNSYMVKSENPKATLI 242

Query: 379 HDLLPIFNAS---------AHILGI-EVCKEHLNKNISIAIEKLVQERLILL----KMKK 424
            +                 A +LG+    +   +K +S  +      R  L       K 
Sbjct: 243 QEAAQYVQKMLTIFGVTDNADVLGLSSGAQGEESKTLSNVLTAFASFREQLRSTAQADKN 302

Query: 425 ---FSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
                  D +R + +   G  LED  +  +  
Sbjct: 303 KMLLQMCDDLRDETMVDLGVRLEDKPDGSSVW 334


>gi|197693954|gb|ACH71646.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  244 bits (624), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693902|gb|ACH71620.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693884|gb|ACH71611.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693956|gb|ACH71647.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  244 bits (623), Expect = 2e-62,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693904|gb|ACH71621.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (622), Expect = 3e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 124/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693916|gb|ACH71627.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (622), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVSMIKTLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIALVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693890|gb|ACH71614.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 86/226 (38%), Positives = 123/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E        +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESK------SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693940|gb|ACH71639.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E        +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESK------SIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693908|gb|ACH71623.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693946|gb|ACH71642.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 88/226 (38%), Positives = 125/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S     + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKAFKE------NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693950|gb|ACH71644.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (621), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 86/226 (38%), Positives = 124/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E        +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKESK------SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693928|gb|ACH71633.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (621), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+++I+ ++    AY  +N +I  DTS   +YGS S       + G R+     K+   
Sbjct: 55  AMVHMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ C   +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCTFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|197693896|gb|ACH71617.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  243 bits (620), Expect = 5e-62,   Method: Composition-based stats.
 Identities = 86/226 (38%), Positives = 124/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++    + + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSGIYIESYTRDLNALNVKQPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY  +N +I  DTS   +YGS S          +R+     K+   
Sbjct: 55  AMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFSRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG DL+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HHENE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|260781591|ref|XP_002585889.1| hypothetical protein BRAFLDRAFT_256696 [Branchiostoma floridae]
 gi|229270953|gb|EEN41900.1| hypothetical protein BRAFLDRAFT_256696 [Branchiostoma floridae]
          Length = 736

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 99/377 (26%), Positives = 149/377 (39%), Gaps = 82/377 (21%)

Query: 146 YEANNEIIFDTSSIPN-----YGSF-------SRRKID-EQKMGTRVPEKYHKKNPADFI 192
           YE+N  + FDT+         Y          S+  ++ E  +         K++  DF 
Sbjct: 246 YESNKSVYFDTTKFDGADSHFYAKLVPEAFGDSKAMLEGEGDLSISQDRLSEKRSTTDFA 305

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           LWK S P EP W+SPWG GRPGWHIECS M+S  LG   DIH GG DL FPHH+NEIAQ+
Sbjct: 306 LWKASKPGEPSWDSPWGMGRPGWHIECSVMASSILGGSLDIHTGGYDLKFPHHDNEIAQA 365

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                 +     ++H+G L +EG KMSKS  NFITI E L         + +  +RL  L
Sbjct: 366 EAYYDNDHWVRYFLHSGHLTIEGCKMSKSLKNFITIQEALSR-------YSSRQLRLGFL 418

Query: 313 MTHYREPIDFTVQRLTEAEILLS---------------------KWPQTSTSKGII---- 347
           +  +++ +D++   +  A                          KW +            
Sbjct: 419 LHSWKDTLDYSSDTMGTAVKYEKMINEFFLTVKDVLRTDAPPFLKWDKAELQLAESFQQR 478

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASAHI 391
              V  AL ++++T + +  + +L  +S                    D+         I
Sbjct: 479 KEGVHQALCDNIDTRATMDQMRELVSDSNVYLKEKRDARQQPDHALLRDIAAYLTTMLKI 538

Query: 392 LGIEVCKEHLN---------KNISIAI--------EKLVQERLILLKMKK---FSSADYI 431
            G    +E +           N+   +        E   + R +  + K        D +
Sbjct: 539 FGAIEGEELIGFPVGGTSQAANLEETVMPYLSTMAEFRDKVRQVARQEKAKEILQLCDGL 598

Query: 432 RKQ-LESKGFILEDYKN 447
           R   L   G  LED++ 
Sbjct: 599 RDDVLPQLGVRLEDHEG 615



 Score =  141 bits (356), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 53/170 (31%), Positives = 76/170 (44%), Gaps = 17/170 (10%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K+YN+L RK   F       +  Y CGPTVYD +H+G+AR  I FD+L R+++ Y+
Sbjct: 20  DTPLKLYNSLTRKKEVFVPQKGRRVGWYSCGPTVYDTSHMGHARSYISFDILRRVMKDYF 79

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDA----ISIITSKNTQQFVKDTTRLACL 117
               V Y  NITDIDDKII+RARQ +      D       ++    T   V+D T+    
Sbjct: 80  -NYDVLYAMNITDIDDKIIKRARQNYLLEQYMDKKPSRKQLLEDTQTAMKVRDLTQYGSG 138

Query: 118 APTHQPRATNHIPQMIYLIQNIILH------------GHAYEANNEIIFD 155
            P    +A      M + +  +               GH Y      I+ 
Sbjct: 139 RPLWLRQALGACSGMTHPLTRVRGRRNPLHHWSEVLLGHGYSKQQSCIYW 188


>gi|260187118|ref|ZP_05764592.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 278

 Score =  240 bits (614), Expect = 3e-61,   Method: Composition-based stats.
 Identities = 85/284 (29%), Positives = 132/284 (46%), Gaps = 26/284 (9%)

Query: 133 IYLIQNIILHGHAYEANN------EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEK 182
           + LI+ ++  G AY  +       +I F   +   +G  S    D      +     P +
Sbjct: 1   VELIEKMLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGDPRR 60

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K +  D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIF
Sbjct: 61  PGKSDELDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIF 120

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PHHE   A + C     + A  ++H G +  +G KMSKS GN + ++ L        +  
Sbjct: 121 PHHEFTAAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALR------AQDV 174

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYN 357
               +RL +L  HYR    ++ Q L EA   L +W   +          +   V   L +
Sbjct: 175 EPSAVRLGLLAGHYRADRFWSQQVLDEATARLHRWRTATALPAGPAAVDVVARVRRYLAD 234

Query: 358 DLNTVSAIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
           DL+T  AI AL     ++ +   HD      +  A   +LG+++
Sbjct: 235 DLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL 278


>gi|25808932|gb|AAN73958.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  239 bits (610), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIKTLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808850|gb|AAN73917.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  239 bits (610), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|30961751|gb|AAP39992.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
          Length = 219

 Score =  239 bits (610), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 85/224 (37%), Positives = 121/224 (54%), Gaps = 17/224 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           +M    L         DIH GG+DL+FPHHENE  Q+ CA  +E
Sbjct: 171 SMVFKTLALANTPYQIDIHAGGVDLLFPHHENEACQTRCAFGVE 214


>gi|25808918|gb|AAN73951.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (609), Expect = 9e-61,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANSPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|167535910|ref|XP_001749628.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163772020|gb|EDQ85679.1| predicted protein [Monosiga brevicollis MX1]
          Length = 473

 Score =  238 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 117/481 (24%), Positives = 174/481 (36%), Gaps = 118/481 (24%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +I N+L R++          +  Y CGPTVYD AH+G+A   +  D L R+L        
Sbjct: 40  QITNSLTRQVEPLPIPSGRPLYWYQCGPTVYDDAHLGHAMSHLRLDALRRILEAAG--VS 97

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           +    ++TDIDDKII RA     +         +  +  Q F  D  +L  L P    R 
Sbjct: 98  LIQAMSVTDIDDKIIARAHANQRNW------QDLAREMEQHFWDDMAKLNVLPPHLPLRV 151

Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI--PNYGSFSRRKIDEQKMGTRVPEK 182
           + H+  +I  IQNI+   HAY A +  I FD ++     YG F    + E       P  
Sbjct: 152 SEHMNSIITFIQNILDRNHAYAAEDGSIYFDVTAFGLDRYGPF---GLSESNAQDAEPRA 208

Query: 183 YHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
           +  ++P DF LWK S    EPG+ESP+GRGRPG                           
Sbjct: 209 HDIRSPRDFALWKASRHSDEPGFESPFGRGRPG--------------------------- 241

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
                      CC          ++H G L L   KMSKS GN  +I   L         
Sbjct: 242 -----------CC----------FVHTGMLLLNSVKMSKSLGNSRSIRAFLADH------ 274

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND--- 358
             A  +R   L  +Y   +D T + +  AE  + K  Q       +      A  +D   
Sbjct: 275 -SADSLRYIALQGYYDTSLDLTSELIDGAESAVRKLAQFVARTRQLAKLESKAQASDYKE 333

Query: 359 ---------LNTVSAIQALHKLARE--------------STKNHDLLPIFNASA------ 389
                     NT  A+Q + +  RE              + +  ++L             
Sbjct: 334 SVRLLLQREFNTGGALQRIFREMRELKLGTVSKQVDPGVTARAQEVLQTLRTLGFNCAQP 393

Query: 390 ---------------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                           +L  +   E ++   +I  E     R   ++   F++ D  R +
Sbjct: 394 PEATSEGVQTDQDTTAVL-TKALDEMVHFRHTIRHEATTAPRENAMRGSLFAACDRARAR 452

Query: 435 L 435
           L
Sbjct: 453 L 453


>gi|197693958|gb|ACH71648.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 217

 Score =  238 bits (609), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 85/226 (37%), Positives = 123/226 (54%), Gaps = 16/226 (7%)

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           + TDIDDKII +A +E      N +I  ++S     + +D   L    P+ +P+A+ ++ 
Sbjct: 1   DFTDIDDKIINKALKE------NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLD 54

Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
            M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+     K+   
Sbjct: 55  AMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQ 112

Query: 190 DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFP 243
           DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH GG +L+FP
Sbjct: 113 DFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGAELLFP 172

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           HH NE  Q+ CA  +E  A  W+HNGF+N+   KMSKS GN   I 
Sbjct: 173 HHGNEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIK 217


>gi|25808940|gb|AAN73962.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFSRIALVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808852|gb|AAN73918.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808924|gb|AAN73954.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808920|gb|AAN73952.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (608), Expect = 1e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
               + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808902|gb|AAN73943.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEHLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808906|gb|AAN73945.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L +   E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLEWSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808846|gb|AAN73915.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808810|gb|AAN73897.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L +   E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLEWSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808858|gb|AAN73921.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFGV 213


>gi|25808856|gb|AAN73920.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 122/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808944|gb|AAN73964.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  238 bits (607), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGTDLLFPHHENEACQTRCAFGV 213


>gi|28493283|ref|NP_787444.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28572606|ref|NP_789386.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|61216627|sp|Q83GH3|SYC2_TROWT RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|61216629|sp|Q83HQ8|SYC2_TROW8 RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
           Full=Cysteine--tRNA ligase 2; Short=CysRS 2
 gi|28410738|emb|CAD67124.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28476324|gb|AAO44413.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 450

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 111/384 (28%), Positives = 184/384 (47%), Gaps = 31/384 (8%)

Query: 7   IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++++  R I +   ++   +R+YVCG T Y   H+G+A   + FD L+RL       + V
Sbjct: 6   VFDSRTRSIVK---LEDCLLRLYVCGITPYKSTHLGHAFTYVGFDTLFRL--ALDSGRDV 60

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
            Y++NI+DID+ + + A +      +      +    T++F +D   L CL P +    +
Sbjct: 61  LYIQNISDIDEPLFQYAEK------VGIHYKDLARTQTKRFFEDMHTLECLPPGYVIPVS 114

Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
             +  +   I+ +I    AY+  N ++ FD S++ + G       D +   + + E    
Sbjct: 115 KVLDGIKTGIEGLISRNMAYKLPNGDVYFD-STLTDPGK--MFCFDRKTAMSLMLETDTG 171

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFP 243
           KNP D +LW+     EP WE+ +G GRP WHI C+ +S+       V  I+GGG DL FP
Sbjct: 172 KNPFDPLLWRG-RGAEPQWEASFGAGRPAWHISCAVLSNLQTQYENVLHIYGGGRDLAFP 230

Query: 244 HHE--NEIAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
           HHE  N +++   A     + +   ++++H G ++  G KMSKS GN + I++L E  + 
Sbjct: 231 HHEFTNVLSKLIRAPKDNKQQDTVQDVFMHTGLVSYMGDKMSKSKGNLVFISQLREQCEK 290

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
            G      VIRLA+L  HYRE  ++  + L  A      W               +A   
Sbjct: 291 IGLHHS--VIRLALLQRHYREDWEWQDECLDRAASRFRLWKSALQEYIGAKGIRSTA--- 345

Query: 358 DLN--TVSAIQALHKLARESTKNH 379
           D N  T  A + +H    +S  +H
Sbjct: 346 DQNKGTQGAWERIHGGVFDSNFDH 369


>gi|25808954|gb|AAN73969.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808910|gb|AAN73947.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTNAPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808806|gb|AAN73895.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808900|gb|AAN73942.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (606), Expect = 2e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808936|gb|AAN73960.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808916|gb|AAN73950.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808914|gb|AAN73949.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCTFGV 213


>gi|25808892|gb|AAN73938.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|30959114|gb|AAO73316.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTDTPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808876|gb|AAN73930.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALADTPYQIDIHAGGTDLLFPHHENEACQTRCAFGV 213


>gi|25808848|gb|AAN73916.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLVFPHHENEACQTRCAFGV 213


>gi|25808816|gb|AAN73900.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (605), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
               + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808838|gb|AAN73911.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (604), Expect = 3e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808886|gb|AAN73935.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFGV 213


>gi|25808950|gb|AAN73967.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  237 bits (604), Expect = 4e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808958|gb|AAN73971.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808862|gb|AAN73923.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808870|gb|AAN73927.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFGV 213


>gi|25808814|gb|AAN73899.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808938|gb|AAN73961.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E        +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKESK------SIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808836|gb|AAN73910.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808942|gb|AAN73963.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|30959116|gb|AAO73317.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 5e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808864|gb|AAN73924.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808872|gb|AAN73928.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808884|gb|AAN73934.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808890|gb|AAN73937.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|25808896|gb|AAN73940.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N ++  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSVQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808898|gb|AAN73941.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSLHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALADTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808834|gb|AAN73909.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (603), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808844|gb|AAN73914.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E        +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKESK------SIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808860|gb|AAN73922.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808812|gb|AAN73898.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 6e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAIKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808948|gb|AAN73966.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 85/223 (38%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEHLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCTFGV 213


>gi|25808804|gb|AAN73894.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSDYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808930|gb|AAN73957.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 118/223 (52%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
               + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 213


>gi|25808946|gb|AAN73965.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808798|gb|AAN73891.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  236 bits (602), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808854|gb|AAN73919.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808842|gb|AAN73913.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (601), Expect = 8e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808874|gb|AAN73929.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (601), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFETLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFGV 213


>gi|25808824|gb|AAN73904.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (601), Expect = 9e-60,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 121/223 (54%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L +   E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLEWSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808904|gb|AAN73944.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (601), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E        +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESK------SIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYQVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808922|gb|AAN73953.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (600), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E        +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKESK------SIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG+DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGVDLLFPHHENEACQTRCAFGV 213


>gi|25808868|gb|AAN73926.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCTFGV 213


>gi|25808934|gb|AAN73959.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (599), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AYE +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYEISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCTFGV 213


>gi|25808840|gb|AAN73912.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRALELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFKTLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808952|gb|AAN73968.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  235 bits (599), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSDYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808888|gb|AAN73936.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N ++  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSVQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGIIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFGV 213


>gi|25808894|gb|AAN73939.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  234 bits (598), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 120/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNMKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808956|gb|AAN73970.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  233 bits (596), Expect = 3e-59,   Method: Composition-based stats.
 Identities = 82/223 (36%), Positives = 118/223 (52%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +A   I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HASSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCTFGV 213


>gi|25808928|gb|AAN73956.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  233 bits (596), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 118/223 (52%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E        +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESK------SIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808912|gb|AAN73948.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 211

 Score =  233 bits (595), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 85/221 (38%), Positives = 119/221 (53%), Gaps = 17/221 (7%)

Query: 45  RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
           R  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   
Sbjct: 1   RSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYI 52

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYG 163
           + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N +I  DTS   +YG
Sbjct: 53  ESYTRDLNALNVKKPSLEPKASEHLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYG 112

Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM 222
           S S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M
Sbjct: 113 SLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSM 170

Query: 223 SSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
               L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 VFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 211


>gi|212695898|ref|ZP_03304026.1| hypothetical protein ANHYDRO_00431 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677021|gb|EEB36628.1| hypothetical protein ANHYDRO_00431 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 204

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 77/199 (38%), Positives = 115/199 (57%), Gaps = 13/199 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  RK  +F+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R LRY     
Sbjct: 1   MKIYNTFTRKKEDFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLRYLG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V YV N TD+DDKII +A +E      N +   +T K  + +++D   L      T  P
Sbjct: 59  DVKYVVNFTDVDDKIINKAIKE------NISTKEVTDKYIKAYMEDAKDLNLDEEHTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RV 179
           +AT  +  +I  ++ ++    AYE++ ++ FD S   +YG  S + I++ + G       
Sbjct: 113 KATETMDDIIDFVKELVDKDCAYESDGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDD 172

Query: 180 PEKYHKKNPADFILWKRST 198
            +K  K+NP DF LWK+  
Sbjct: 173 KDKGKKRNPMDFTLWKKQK 191


>gi|25808820|gb|AAN73902.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  233 bits (594), Expect = 6e-59,   Method: Composition-based stats.
 Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E        +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKESK------SIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 213


>gi|25808908|gb|AAN73946.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 82/223 (36%), Positives = 118/223 (52%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++S  G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSHLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCTFGV 213


>gi|289447749|ref|ZP_06437493.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|289420707|gb|EFD17908.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
          Length = 272

 Score =  232 bits (591), Expect = 1e-58,   Method: Composition-based stats.
 Identities = 83/278 (29%), Positives = 128/278 (46%), Gaps = 26/278 (9%)

Query: 139 IILHGHAYEANN------EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNP 188
           ++  G AY  +       +I F   +   +G  S    D      +     P +  K + 
Sbjct: 1   MLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGDPRRPGKSDE 60

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
            D +LW+ + P EP W SP+G GRPGWH+EC+A++   +G   DI GGG DLIFPHHE  
Sbjct: 61  LDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFT 120

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
            A + C     + A  ++H G +  +G KMSKS GN + ++ L        +      +R
Sbjct: 121 AAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSALR------AQDVEPSAVR 174

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYNDLNTVS 363
           L +L  HYR    ++ Q L EA   L +W   +          +   V   L +DL+T  
Sbjct: 175 LGLLAGHYRADRFWSQQVLDEATARLHRWRTATALPAGPAAVDVVARVRRYLADDLDTPK 234

Query: 364 AIQALHKLARESTK--NHDLLP---IFNASAHILGIEV 396
           AI AL     ++ +   HD      +  A   +LG+++
Sbjct: 235 AIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL 272


>gi|25808800|gb|AAN73892.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 213

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 82/223 (36%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 43  NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
           +AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S 
Sbjct: 1   HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52

Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN 161
             + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +
Sbjct: 53  YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
           YGS S          +R+     K+   DF+LWK      + G++S  G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSHLGKGRPGWHIECS 170

Query: 221 AMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
           +M    L         DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCTFGV 213


>gi|195374027|ref|XP_002046047.1| GM15123 [Drosophila sechellia]
 gi|194123235|gb|EDW45278.1| GM15123 [Drosophila sechellia]
          Length = 256

 Score =  231 bits (589), Expect = 2e-58,   Method: Composition-based stats.
 Identities = 83/215 (38%), Positives = 114/215 (53%), Gaps = 23/215 (10%)

Query: 139 IILHGHAYEANNEIIFDTSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHK 185
           II +G AY ANN + FD +                 YG     +  E  +         K
Sbjct: 1   IIDNGLAYAANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEK 60

Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           ++  DF LWK S   EP W+SPWG+GRPGWHIECSAM+S   G  FDIH GG+DL FPHH
Sbjct: 61  RSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHH 120

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           +NE+AQS  A    +    ++H G L + G KMSKS  NF+TI E L       +   A 
Sbjct: 121 DNELAQSEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSAT 173

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEA---EILLSKW 337
            +RLA L+  +++ +D++   +  A   E  L+++
Sbjct: 174 QLRLAFLLHSWKDTLDYSENTMEMATQYEKFLNEF 208


>gi|30961753|gb|AAP39993.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
 gi|30961755|gb|AAP39994.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
          Length = 219

 Score =  230 bits (587), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 84/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)

Query: 44  ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
           AR  I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S  
Sbjct: 2   ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIY 53

Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNY 162
            + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +Y
Sbjct: 54  IESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDY 113

Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSA 221
           GS S           R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171

Query: 222 MSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           M    L         DIH GG+DL+FPHHENE  Q+  A  +E
Sbjct: 172 MVFKTLALANTPYQIDIHAGGMDLLFPHHENEACQTRWAFGVE 214


>gi|149061785|gb|EDM12208.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_c [Rattus
           norvegicus]
          Length = 473

 Score =  229 bits (584), Expect = 8e-58,   Method: Composition-based stats.
 Identities = 68/182 (37%), Positives = 94/182 (51%), Gaps = 13/182 (7%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CA 255
             
Sbjct: 466 VG 467



 Score =  138 bits (347), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 42/98 (42%), Positives = 57/98 (58%), Gaps = 1/98 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
             V Y  NITDIDDKII RARQ +      +       
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYREQKPSAAQ 207


>gi|148686273|gb|EDL18220.1| cysteinyl-tRNA synthetase, isoform CRA_b [Mus musculus]
          Length = 473

 Score =  228 bits (583), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 68/187 (36%), Positives = 94/187 (50%), Gaps = 13/187 (6%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  N   S +     ++F KD   L  L P    R + ++P+++  +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345

Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
            +N  + FDT+        +YG      + +QK                  K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           WK S P EP W  PWG+GRPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS 
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465

Query: 254 CADRIEK 260
                  
Sbjct: 466 VGKDRLP 472



 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           ++++YN+L R    F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+LR Y+ +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRDYF-Q 169

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
             V Y  NITDIDDKII RARQ +      +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200


>gi|25808866|gb|AAN73925.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 209

 Score =  228 bits (582), Expect = 1e-57,   Method: Composition-based stats.
 Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 17/219 (7%)

Query: 47  MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
            I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + 
Sbjct: 1   AIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIES 52

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSF 165
           + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS 
Sbjct: 53  YTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSL 112

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSS 224
           S       + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M  
Sbjct: 113 SVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVF 170

Query: 225 HYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
             L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 ETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 209


>gi|25808926|gb|AAN73955.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 209

 Score =  228 bits (581), Expect = 2e-57,   Method: Composition-based stats.
 Identities = 82/219 (37%), Positives = 117/219 (53%), Gaps = 17/219 (7%)

Query: 47  MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
            I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + 
Sbjct: 1   AIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIES 52

Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSF 165
           + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS 
Sbjct: 53  YTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSL 112

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSS 224
           S          +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M  
Sbjct: 113 SVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVF 170

Query: 225 HYL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
             L         DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 ETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCAFGV 209


>gi|331243229|ref|XP_003334258.1| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309313248|gb|EFP89839.1| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 822

 Score =  227 bits (579), Expect = 3e-57,   Method: Composition-based stats.
 Identities = 86/350 (24%), Positives = 140/350 (40%), Gaps = 69/350 (19%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
           +     + F  D   L    P+   R ++++ +++  +Q I+  G AY     + FD ++
Sbjct: 218 LAVYWEKSFFDDMATLGVEPPSVLTRVSDYVEEIVEYVQKIVERGFAYVHEGSVYFDVNA 277

Query: 159 IPN---------------YGSF-----SRRKIDEQKMGT------RVPEKYHKKNPADFI 192
                             Y        + +K+ E+  G              K++PADF 
Sbjct: 278 FDGAEVKDHPSQQTFSHCYAKLQPGSKANKKLMEEGEGALSVNPASSTATDVKRSPADFA 337

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           LWK+S P EPGW+S WG GRPGWHIECS M+S  LG   DIH GG+DL+FPHH+NE+AQS
Sbjct: 338 LWKKSKPGEPGWQSVWGMGRPGWHIECSVMASAILGDGMDIHSGGVDLMFPHHDNEMAQS 397

Query: 253 CCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
             A +      + +       + G   ++S    +   E      F         +R   
Sbjct: 398 EDALKQHSARQLRLSFIAQRWDLGMDFAESAMAEVRNQESTFNNFFAVVK----ALRY-- 451

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPA---VLSALYNDLNTVSAI 365
                    + + +++ +A I L +     TS     I + A     +AL +  NT  A+
Sbjct: 452 ---------ERSTEQMIQA-IDLDQSKSVDTSHPLHAIFENARSDFHAALCDSFNTPEAM 501

Query: 366 QALHKLARESTKNHD--------------------LLPIFNASAHILGIE 395
           + L  L  E+ K                       +    +    + G++
Sbjct: 502 KQLLNLVTETNKYISAQIASIRAEPDGQSLLVISHIAAWISKMLRVFGLD 551



 Score = 84.9 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 18/106 (16%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           +   +++YN+L +    F   +P+ I                     +  D+L R+ R Y
Sbjct: 20  VSSNLRVYNSLTKSKVPFIPKEPNKITW-----------------NYVTQDILRRIARDY 62

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
           +    V +V N+TDIDDKII+RARQ+H    +     +IT + T Q
Sbjct: 63  FAYD-VKFVMNVTDIDDKIIQRARQQHLLENLRSKADLITPELTDQ 107


>gi|325845931|ref|ZP_08169129.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481837|gb|EGC84869.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 210

 Score =  226 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 13/195 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KIYNT  RK  +F+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R LRY     
Sbjct: 1   MKIYNTFTRKKEDFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLRYLG--N 58

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
            V YV N TD+DDKII +A +E      N +   +T K  + ++ D   L      T  P
Sbjct: 59  DVKYVVNFTDVDDKIINKAIKE------NISTKEVTDKYIKAYMDDAKDLNLDEEHTIHP 112

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RV 179
           +AT  +  +I  ++ ++    AYE++ ++ FD S   +YG  S + I++ + G       
Sbjct: 113 KATETMDDIIDFVKELVDKDCAYESDGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDD 172

Query: 180 PEKYHKKNPADFILW 194
            +K  K+NP DF LW
Sbjct: 173 KDKGKKRNPMDFTLW 187


>gi|212695899|ref|ZP_03304027.1| hypothetical protein ANHYDRO_00432 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677022|gb|EEB36629.1| hypothetical protein ANHYDRO_00432 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 257

 Score =  226 bits (577), Expect = 5e-57,   Method: Composition-based stats.
 Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 46/271 (16%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS   LG+  D+H GG DL FPHHENEIAQS      +K AN W+HNG + ++G KMSKS
Sbjct: 1   MSKKLLGETIDLHAGGEDLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF T++++        + +   V+R  +L   YR PI+FT + + +A+  L +     
Sbjct: 60  LGNFFTLHDI-------KKEYDLMVVRFWLLSAGYRLPINFTREIIEQAKNSLERLNNAK 112

Query: 342 ----------------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                                       +      + +DLNT  A+  L ++++ +    
Sbjct: 113 FRMDDLLEKASGNLKDEEKDLVKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKL 172

Query: 380 D----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
           D             +F     +LGIE  K+  +      I KL+ ER    K K F+ AD
Sbjct: 173 DSNSSKEFVEKTRALFIKLEDVLGIENRKKTDDSLDEDLINKLIDERKEAKKAKDFAKAD 232

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L   G I++D +        T+W+ K
Sbjct: 233 EIRDKLSDMGIIIKDTR------EGTKWELK 257


>gi|325845903|ref|ZP_08169101.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325481809|gb|EGC84841.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 257

 Score =  226 bits (577), Expect = 6e-57,   Method: Composition-based stats.
 Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 46/271 (16%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           MS   LG+  D+H GG DL FPHHENEIAQS      +K AN W+HNG + ++G KMSKS
Sbjct: 1   MSKKLLGETIDLHAGGEDLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKS 59

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF T++++        + +   V+R  +L   YR PI+FT + + +A+  L +     
Sbjct: 60  LGNFFTLHDI-------KKEYDLMVVRFWLLSAGYRLPINFTREIIEQAKNSLERLNNAK 112

Query: 342 ----------------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                                       +      + +DLNT  A+  L ++++ +    
Sbjct: 113 FRMDDLLEKASGNLKDEEKDLLKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKL 172

Query: 380 D----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
           D             +F     +LGIE  K+  +      I KL+ ER    K K F+ AD
Sbjct: 173 DSNSSKEFVEKTRALFIKLEDVLGIENRKKTDDSLDEDLINKLIDERKEAKKAKDFAKAD 232

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IR +L   G I++D +        T+W+ K
Sbjct: 233 EIRDKLSDMGIIIKDTR------EGTKWELK 257


>gi|25808878|gb|AAN73931.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 208

 Score =  224 bits (571), Expect = 3e-56,   Method: Composition-based stats.
 Identities = 81/218 (37%), Positives = 116/218 (53%), Gaps = 17/218 (7%)

Query: 48  IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
           I FD+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + +
Sbjct: 1   IAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESY 52

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS 166
            +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S
Sbjct: 53  TRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLS 112

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH 225
                      R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M   
Sbjct: 113 VHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFK 170

Query: 226 YL-----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
            L         DIH GG  L+FPHHENE  Q+ CA  +
Sbjct: 171 TLALTDTPYQIDIHAGGAGLLFPHHENEACQTRCAFGV 208


>gi|25808882|gb|AAN73933.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 205

 Score =  223 bits (569), Expect = 5e-56,   Method: Composition-based stats.
 Identities = 81/215 (37%), Positives = 115/215 (53%), Gaps = 17/215 (7%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           D+L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D
Sbjct: 1   DLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRD 52

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRK 169
              L    P+ +P+A+ H+  M+ +I+ ++    AY+ +N +I  DTS   +YGS S   
Sbjct: 53  LNALNVKKPSLEPKASEHLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN 112

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL- 227
                   R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L 
Sbjct: 113 --SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLA 170

Query: 228 ----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                   DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 LTDTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 205


>gi|25808830|gb|AAN73907.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 205

 Score =  221 bits (564), Expect = 2e-55,   Method: Composition-based stats.
 Identities = 79/215 (36%), Positives = 114/215 (53%), Gaps = 17/215 (7%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           D+L R L     E  V  VRN TDIDDKII +A +E        +I  ++S   + + +D
Sbjct: 1   DLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESK------SIQELSSIYIESYTRD 52

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRK 169
              L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S   
Sbjct: 53  LNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN 112

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL- 227
                  +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L 
Sbjct: 113 --SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLA 170

Query: 228 ----GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                   DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 LANTPYQIDIHAGGADLLFPHHENEACQTRCAFGV 205


>gi|242280324|ref|YP_002992453.1| cysteine synthase [Desulfovibrio salexigens DSM 2638]
 gi|242123218|gb|ACS80914.1| cysteine synthase [Desulfovibrio salexigens DSM 2638]
          Length = 764

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 99/486 (20%), Positives = 178/486 (36%), Gaps = 62/486 (12%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           KI++          +I  +   ++  GP+  +       R +++ DVL R L     +  
Sbjct: 305 KIFDQSSGADRVL-SISEAETGLFTMGPSFDNPYDPEVFRRIVLLDVLARHLEREGAK-- 361

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V+ +  + D++D+ +  +R+         +  I T+     ++     L         RA
Sbjct: 362 VSALVGLADLEDQTLAASRERGVDRETF-STEIATAVRKAAYL-----LGVRKSMRFERA 415

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYH 184
           +  + + + L + ++ HG AYE    + FD S    YG  S   ID+  +G  V  + Y 
Sbjct: 416 SESVDRTVELCRALLAHGLAYEKLRSVYFDISRDKGYGQMSNMDIDKVSLGKTVDMDDYV 475

Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K+NP DF L KR+T  +       E+ WG  RP W ++ +  +   L  V  +  G +  
Sbjct: 476 KENPRDFTLLKRATLQDLKLGDIIETEWGNVRPSWFMQQAVTALEGLPGVSLVLAGEI-H 534

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            FPH EN  A              W+    +   G  +         ++ELLE       
Sbjct: 535 RFPHLENLRAIWA---GARVAPQAWMVAQPVLPGGPVLPC-------VDELLEQSG---- 580

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDP 349
                 +R+ ML + Y++P+  + Q ++       K    +                ID 
Sbjct: 581 --QPIAVRMWMLSSSYKKPLVCSEQSISMWVKNQQKLQDLAAGLSIHAGDSGQLSEDIDQ 638

Query: 350 AVL-------SALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHI 391
            V         AL ++L        L    +                   L        I
Sbjct: 639 EVFTLKSGLSQALNDNLMLHRFWPILFSFTKTINSLLGSGKLSAKEAKFCLDQLLEVDDI 698

Query: 392 LGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           LGI   +       ++    ++L+++R +    K F++AD +R +L   GF +ED     
Sbjct: 699 LGILDHEAMPVPFVSLPEEAKELLEQRELARANKDFTTADGLRDKLLKLGFNVEDSSEGA 758

Query: 450 NGQRMT 455
              R+ 
Sbjct: 759 RVFRVR 764


>gi|317154053|ref|YP_004122101.1| cysteine synthase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944304|gb|ADU63355.1| cysteine synthase [Desulfovibrio aespoeensis Aspo-2]
          Length = 771

 Score =  220 bits (561), Expect = 4e-55,   Method: Composition-based stats.
 Identities = 95/494 (19%), Positives = 169/494 (34%), Gaps = 82/494 (16%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I +++         +      + +Y  GP + +   +   R ++V DVL R LR    
Sbjct: 300 SGITLFDMATGATKPLKTQ--GGLGLYTMGPNLDNPDGLDAWRRVVVLDVLARHLRSLGV 357

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT-------TRLA 115
           E        ++D+DD+ +  AR       +    +        +  +D            
Sbjct: 358 E--TRAAVGLSDMDDRTLTAARHTDADRAV---FAAGLRARIMERARDMGVAVAGGDGAG 412

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
                  P ++N   + + L + ++  G AYE    + FD      YG      +D+   
Sbjct: 413 V----DFPLSSNSEGKALELCRKLLGKGLAYEKLRSVYFDIFRDKRYGEIGAMDMDKVSG 468

Query: 176 GTRVP-EKYHKKNPADFILWKRS-----TPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
           G  V  + Y K NP DF L KR+        E   E+ WG  RP W ++ +A +   L  
Sbjct: 469 GRTVDLDAYVKDNPLDFTLLKRATLLDLKRGEV-LETEWGNVRPSWFLQHAATALTSL-P 526

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+  G     FPH EN  A    A R  +    W+      L  +    ++    T+ 
Sbjct: 527 RIDVMIGSEKHRFPHLENLRAIWSAAGRELQ---AWL------LNHQATDCADATLTTVA 577

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------ 343
           + L   +           R  +L +  R+P+  +   L        +  +   +      
Sbjct: 578 DTLGGFR---------AARFWLLSSACRKPLCASSDNLVMWARNWRRVQEALAALSAPRT 628

Query: 344 ------------KGIIDPA-------VLSALYNDLNTVSAIQALHKLARESTK------- 377
                        G  D A         +A+  DL        L +  ++          
Sbjct: 629 GAAPSGESAGKIPGEADQAVFDLRAGFKTAMNEDLALHRFWPVLFRFVKQVNAWAAAGAL 688

Query: 378 ----NHDLLPIFNASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYI 431
                   L    A   ILGI    +      ++ I ++ ++ +R    + K F+++D +
Sbjct: 689 TGPAASACLDELLAVDAILGILDHAQMPLPLADLPIEVQGMLADRQKAREAKDFAASDAL 748

Query: 432 RKQLESKGFILEDY 445
           R Q+ + GF LED 
Sbjct: 749 RDQIANAGFRLEDT 762


>gi|25808822|gb|AAN73903.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 204

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 17/214 (7%)

Query: 52  VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           +L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D 
Sbjct: 1   LLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDL 52

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI 170
             L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    
Sbjct: 53  NALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN- 111

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-- 227
                  R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L  
Sbjct: 112 -SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLAL 170

Query: 228 ---GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                  DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 ANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 204


>gi|25808880|gb|AAN73932.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  220 bits (560), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 80/213 (37%), Positives = 114/213 (53%), Gaps = 17/213 (7%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D  
Sbjct: 1   LRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKID 171
            L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S     
Sbjct: 53  ALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-S 111

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL--- 227
             + G R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L   
Sbjct: 112 SMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170

Query: 228 --GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                 DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 NAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 203


>gi|25808808|gb|AAN73896.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  219 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 17/213 (7%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D  
Sbjct: 1   LRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKID 171
            L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S     
Sbjct: 53  ALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-- 110

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL--- 227
                +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L   
Sbjct: 111 SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170

Query: 228 --GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                 DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 NAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 203


>gi|312086706|ref|XP_003145183.1| cysteinyl tRNA synthetase 1 [Loa loa]
 gi|307759655|gb|EFO18889.1| cysteinyl tRNA synthetase 1 [Loa loa]
          Length = 470

 Score =  219 bits (559), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 94/352 (26%), Positives = 140/352 (39%), Gaps = 81/352 (23%)

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
            + + E +    +     K+N  DF LWK S   EP W SPWG+GRPGWHIECSAMSS  
Sbjct: 1   MKNMRESEGDLSMGNLQSKRNVTDFALWKASKDGEPYWNSPWGKGRPGWHIECSAMSSKI 60

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
            G   DIH GG DL FPHH+NEIAQ      IE   N ++H G L + G KMSKS  NFI
Sbjct: 61  CGSSLDIHAGGFDLKFPHHDNEIAQVEAYYDIENWVNYFLHCGSLRIAGLKMSKSLKNFI 120

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--------------EI 332
           TI E L       + + A  +R+  LM ++ + +D++   +  A              + 
Sbjct: 121 TIREAL-------KHYSARQLRILFLMHNWNDVLDYSAASMERALQFEKISNEFFLLVKD 173

Query: 333 LLSKWPQTSTSKGI----------------IDPAVLSALYNDLNTVSAIQALHKLAREST 376
            L +  + ++S+                  I   +  AL + ++T + I+ L +L     
Sbjct: 174 YLRRHYKPNSSESYQKYDDGELLLVGNFSKIKTEINIALCDSVDTRTVIEKLRELIGIGN 233

Query: 377 KN-----------------HDLLPIFNASAHILGIEV----------------------- 396
                               ++         I G+                         
Sbjct: 234 AYINEMEKKENCIPNCLLLRNIALYMTWLLKIFGVVPRNADIGFPIEENGVSNHCFSITS 293

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMK---KFSSADYIRKQ-LESKGFILED 444
            +E L   ++  ++     R +  + K        D +R + L   G  LED
Sbjct: 294 KEELLMPYLTALVDFRENVRKVAREQKIIEILEECDKLRDEVLPELGVRLED 345


>gi|25808802|gb|AAN73893.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  218 bits (557), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 78/213 (36%), Positives = 111/213 (52%), Gaps = 17/213 (7%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D  
Sbjct: 1   LRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKID 171
            L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S     
Sbjct: 53  ALNVKKPSLEPKASEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-- 110

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL--- 227
                 R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L   
Sbjct: 111 SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALT 170

Query: 228 --GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                 DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 NTPYQIDIHAGGADLLFPHHENEACQTRCTFGV 203


>gi|25808832|gb|AAN73908.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 204

 Score =  218 bits (556), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 79/214 (36%), Positives = 113/214 (52%), Gaps = 17/214 (7%)

Query: 52  VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           +L R L     E  V  VRN TDIDDKII +A +E      N  I  ++S   + + +D 
Sbjct: 1   LLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKIIQELSSIYIESYTRDL 52

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI 170
             L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    
Sbjct: 53  NALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN- 111

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-- 227
                 +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L  
Sbjct: 112 -SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLAL 170

Query: 228 ---GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                  DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 ANAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 204


>gi|90076574|dbj|BAE87967.1| unnamed protein product [Macaca fascicularis]
          Length = 230

 Score =  218 bits (556), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 75/189 (39%), Positives = 101/189 (53%), Gaps = 18/189 (9%)

Query: 160 PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFILWKRSTPMEPGWESPWGRG 211
            +YG      + +QK                  K++P DF LWK S P EP W  PWG+G
Sbjct: 20  HSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPWGKG 79

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPGWHIECSAM+   LG   DIHGGG DL FPHH+NE+AQS      +     ++H G L
Sbjct: 80  RPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHTGHL 139

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA- 330
            + G KMSKS  NFITI + L       +   A  +RLA LM  +++ +D++   +  A 
Sbjct: 140 TIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLMHSWKDTLDYSSNTMESAL 192

Query: 331 --EILLSKW 337
             E  L+++
Sbjct: 193 QYEKFLNEF 201


>gi|25808818|gb|AAN73901.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 17/213 (7%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           L R L     E  V  VRN TDIDDKII +A +E      N +I  ++    + + +D  
Sbjct: 1   LRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSGIYIESYTRDLN 52

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKID 171
            L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S     
Sbjct: 53  ALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN-- 110

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL--- 227
                +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L   
Sbjct: 111 SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170

Query: 228 --GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                 DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 NTPYQIDIHAGGSDLLFPHHENEACQTRCTFGV 203


>gi|30961749|gb|AAP39991.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
          Length = 197

 Score =  216 bits (550), Expect = 6e-54,   Method: Composition-based stats.
 Identities = 76/204 (37%), Positives = 110/204 (53%), Gaps = 15/204 (7%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +
Sbjct: 1   GYEVVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLE 54

Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S           R+  
Sbjct: 55  PKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGL 112

Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHG 235
              K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH 
Sbjct: 113 VQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALANTPYQIDIHA 172

Query: 236 GGLDLIFPHHENEIAQSCCADRIE 259
           GG+DL+FPHHENE  Q+ CA  +E
Sbjct: 173 GGVDLLFPHHENEACQTRCAFGVE 196


>gi|25808828|gb|AAN73906.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 204

 Score =  216 bits (550), Expect = 7e-54,   Method: Composition-based stats.
 Identities = 78/214 (36%), Positives = 112/214 (52%), Gaps = 17/214 (7%)

Query: 52  VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
           +L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D 
Sbjct: 1   LLRRTLELSGYE--VILVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDL 52

Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI 170
             L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S    
Sbjct: 53  NALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN- 111

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-- 227
                  R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L  
Sbjct: 112 -SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLAL 170

Query: 228 ---GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                  DIH GG DL+FPHHENE  Q+ C   +
Sbjct: 171 ANTPYQIDIHAGGADLLFPHHENEACQTRCTFGV 204


>gi|25808826|gb|AAN73905.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 203

 Score =  216 bits (550), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 17/213 (7%)

Query: 53  LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           L R L     E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D  
Sbjct: 1   LRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52

Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKID 171
            L    P+ +P+A+ ++  M+++I+ ++    AY  +N +I  DTS   +YGS S     
Sbjct: 53  ALNVKKPSLEPKASEYLGAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN-- 110

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL--- 227
                 R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L   
Sbjct: 111 SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170

Query: 228 --GKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                 DIH GG DL+FPHHENE  Q+ CA  +
Sbjct: 171 NAPYQIDIHAGGADLLFPHHENEACQTRCAFGV 203


>gi|298528121|ref|ZP_07015525.1| cysteine synthase B [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511773|gb|EFI35675.1| cysteine synthase B [Desulfonatronospira thiodismutans ASO3-1]
          Length = 776

 Score =  213 bits (544), Expect = 4e-53,   Method: Composition-based stats.
 Identities = 99/485 (20%), Positives = 172/485 (35%), Gaps = 62/485 (12%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            IKIY+  +RK    Q        ++  GP    F      R  +  DVL R L      
Sbjct: 301 GIKIYDLQKRKKAVLQC-SGKKPGIFTPGPRTNFFQDPDFWRRAVFLDVLCRRLAQKG-- 357

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V  + D DD+ +E  R++  S       ++ + ++    +K       L      
Sbjct: 358 HDPNPVAAVADFDDRTLECMREKGVSREDFSRETLDSIRDLAGRIKLNRNFNFLP----- 412

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EK 182
            A   +   I +   ++  G AYE    + FD     +YG  +    ++   G  V  E 
Sbjct: 413 -AAGSLDTGIEMCNKLLSRGLAYEKLRCVYFDVGRDRDYGLLAGIDPEKIISGKTVDLED 471

Query: 183 YHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
           Y K +P DF L KR++      E   ++ WG  RP W+++ +A+++   G   D+   G 
Sbjct: 472 YVKDSPRDFTLLKRASLKDLKEENVLKTKWGNVRPSWYLQMAAVAAENAG-HLDLVMAGE 530

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
             +FPH +N ++    +  +      W     ++ +  K     G       + E  +  
Sbjct: 531 AHLFPHLDNLLSIWKGSTSLRP--QCWSLALPVHHQ-EKGEPLPG-------IQEMAREM 580

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
           G   P   +R+ ++   Y  P+ F+ + L        +  +      I            
Sbjct: 581 GGFHP---LRMWLMSVSYHRPLMFSPKNLEMWVKNWKRLQELMGKLKICARGTRPDKETG 637

Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
                    + PA+   L +DL        L +  R+  K  D            L    
Sbjct: 638 SEVEKQCRELGPALSGCLDDDLALYKFWPQLFEFCRKMQKLLDENLMDVRDAGSCLHHLQ 697

Query: 387 ASAHILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               IL I   +          + I +L+Q R    + K F +AD +R +  S GF L D
Sbjct: 698 GLDSILKIIDWQALPLAENEYPVQISELLQARARAKEAKDFVAADELRDRALSSGFRLVD 757

Query: 445 YKNPD 449
            ++  
Sbjct: 758 TRDGT 762


>gi|256828837|ref|YP_003157565.1| cysteine synthase [Desulfomicrobium baculatum DSM 4028]
 gi|256578013|gb|ACU89149.1| cysteine synthase [Desulfomicrobium baculatum DSM 4028]
          Length = 768

 Score =  212 bits (540), Expect = 1e-52,   Method: Composition-based stats.
 Identities = 95/466 (20%), Positives = 165/466 (35%), Gaps = 57/466 (12%)

Query: 24  SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
               ++  GP++ D   +   R ++  DVL + L      + V     + D+DD+ +  A
Sbjct: 326 GGHALFTPGPSLDDLGELDVWRRIVWLDVLAKALVERG--QSVRLAVGLADMDDRALAAA 383

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
           R+    +           +  +  +     L        P A     + + L + +++ G
Sbjct: 384 REAKIGL------QDFGLRAREFMLAHAKALGVSDTVLFPLAGASQERALGLARKLLVKG 437

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH-KKNPADFILWKRST---- 198
            AYE    + FD +    YG  S        +G  V    + K NPADF L KR+T    
Sbjct: 438 QAYEKLRSVYFDVTRDKTYGQISCVDTAGMNLGYTVDLADYVKDNPADFTLLKRATLQDL 497

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
            +    E+ WG+ RP W ++ +A +   LG    +        FPH +N  A       +
Sbjct: 498 KLGDVIETEWGKVRPSWFLQLAATALDALGS-VSVMFAAESHRFPHLDNFSAIWSAGAGV 556

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFI-TINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
              A  W+ +  +        +  G  + ++ E LE    G      P +RL +L   Y 
Sbjct: 557 RPMA--WMVSQPVT------PREPGEAVPSLAEALEIAGTG------PALRLWLLSASYL 602

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------IIDPAVLSALYNDLN 360
           + + ++ + L       ++      S                    +  A  +AL ++L+
Sbjct: 603 KSLAYSPESLVMWVKNQNRLQDAYVSASLGGAGTGVSAELEQAIYDLKTAFATALDDNLD 662

Query: 361 TVSAIQALHKLARESTK---------NHDLLPIFNASAHILG-IEVCKEHL-NKNISIAI 409
                 AL   A+                +     A   +LG ++  +  L  K+     
Sbjct: 663 LAHFWPALFAFAKTVNSRAGKMSTDEAALVAEQLLACDRVLGYLDHARLPLAEKSWPREA 722

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             LV  R    K K F  AD +R +L   G  LED+       R T
Sbjct: 723 ADLVGRREEARKAKDFVRADALRAELAGMGLRLEDHPAGVRLFRRT 768


>gi|213022498|ref|ZP_03336945.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 151

 Score =  211 bits (538), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 64/157 (40%), Positives = 94/157 (59%), Gaps = 9/157 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2   LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PR
Sbjct: 61  -LKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIP 160
           AT+HI ++I L + +I  GHAY A+  +++FD  + P
Sbjct: 114 ATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDP 150


>gi|327307610|ref|XP_003238496.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326458752|gb|EGD84205.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 453

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/310 (26%), Positives = 128/310 (41%), Gaps = 68/310 (21%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIF 154
              +T     +F++D   L  L P    R T++IP++I  I+ II +G AY   +  I F
Sbjct: 60  FRTLTRNFETRFLEDMWCLNVLDPDELTRVTSYIPEIIQFIEKIIDNGFAYSTLDGSIYF 119

Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           +     N G+            + +     G+       K +  DF LW+ S P EP W 
Sbjct: 120 NIDKFENAGNHYAKLEPWNRHNKHLQRDGEGSLSKNTTAKASKNDFALWEASRPGEPSWP 179

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           SPWG GRPGWHIECSAM+S  LG   DIH GG+DL FPHH+NE+ Q+             
Sbjct: 180 SPWGNGRPGWHIECSAMASAKLGSQIDIHSGGIDLAFPHHDNELPQN------------- 226

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
                +N+     +K +  F+    ++  KK                        D+++ 
Sbjct: 227 ----MVNVARSWEAKLDNFFLKARNIVVLKKTILEEQSHN---------------DYSLT 267

Query: 326 R-LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
           R L  A+                   V +AL +  +T +A+ A+ +L        +    
Sbjct: 268 RQLISAQ-----------------EKVFNALCSSFDTPAAMNAISEL--------EGARW 302

Query: 385 FNASAHILGI 394
             +  +I G+
Sbjct: 303 VTSMMNIFGL 312


>gi|322787495|gb|EFZ13583.1| hypothetical protein SINV_12569 [Solenopsis invicta]
          Length = 159

 Score =  209 bits (533), Expect = 7e-52,   Method: Composition-based stats.
 Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 7/158 (4%)

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
             + T V +   KK+  DF LWK S   EP W+SPWGRGRPGWHIECS M+S   G   D
Sbjct: 1   GDLSTTVDKLSEKKSVTDFALWKSSKSGEPWWDSPWGRGRPGWHIECSVMASTICGDSLD 60

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH GG+DL FPHH+NE+AQ+            ++H+G L + G KMSKS  NF+TI E L
Sbjct: 61  IHTGGVDLKFPHHDNELAQAEAYYGNSDWVKYFLHSGHLTIAGCKMSKSLKNFVTIQEAL 120

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
                  + + +  +RLA L+  +++ +D++   +  A
Sbjct: 121 -------KKYSSRQLRLAFLLHSWKDTLDYSDNTMNMA 151


>gi|323700693|ref|ZP_08112605.1| cysteine synthase [Desulfovibrio sp. ND132]
 gi|323460625|gb|EGB16490.1| cysteine synthase [Desulfovibrio desulfuricans ND132]
          Length = 759

 Score =  208 bits (529), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 90/456 (19%), Positives = 165/456 (36%), Gaps = 68/456 (14%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP++ +   + + R +++ DV  R L         + V  +TD+DD+ +  AR+   
Sbjct: 324 YTMGPSLDNPDGLDSWRRLVLLDVFLRHL--AGRGVKASGVAGLTDMDDRTLAAARE--- 378

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
               +   + +     +  +     +        P ++      + L + ++  G AYE 
Sbjct: 379 ---ADTDRASLAESRREDILARGRAMGLSDELKFPLSSASNETALSLCRKLLGKGLAYEK 435

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRS-----TPMEP 202
              + FD      YG      +D+   G  V  + Y K NP DF L KR+        E 
Sbjct: 436 LRSVYFDVFRDKRYGEIGTVDMDKVSGGRTVDLDAYVKDNPLDFTLLKRASLMDLKRGEV 495

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
             E+ WG  RP W ++ +AM+   L +  D+  G     FPH EN  A    A R     
Sbjct: 496 -LETQWGNVRPSWFLQHAAMALDELPRT-DVMIGSDKHRFPHLENLRAIWSTAGRE---V 550

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFI-TINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
             W          ++ S + G  + T+ E L   +           RL +L    R+P+ 
Sbjct: 551 QAW-------TACQQTSDAEGETLATVAETLGGFR---------AARLWLLSAAPRKPLC 594

Query: 322 FTVQRLTEAEILLSKWPQTSTSKG-------------------IIDPAVLSALYNDLNTV 362
            +   L        +  + + +                      +  A  +A+ + L   
Sbjct: 595 ASADNLAMWARNWRRIQEGAVALTLALDARGDTVSTDVEQAVFDLKAAFRTAMDDGLKLH 654

Query: 363 SAIQALHKLARESTK-----------NHDLLPIFNASAHILGIEVCKEHL--NKNISIAI 409
               AL +  ++  +               L    A   IL I    +      ++ + +
Sbjct: 655 HFWPALFRFIKQVNQWAGDDRLTGAAARACLDELKAMDAILAILDPAQMPVPLSDLPVPV 714

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           + LV +R    + K F+ +D +R ++ + GF +ED 
Sbjct: 715 QGLVADRQKAREAKDFALSDELRDKIAAAGFRVEDT 750


>gi|255572116|ref|XP_002526998.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
 gi|223533633|gb|EEF35370.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
          Length = 183

 Score =  207 bits (527), Expect = 4e-51,   Method: Composition-based stats.
 Identities = 76/173 (43%), Positives = 95/173 (54%), Gaps = 2/173 (1%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              L C       R  N +P     + +      AY +  ++ F     PNYG  S +K+
Sbjct: 4   CAALTCQVLLKCSREVNPLPVKELQLSSDYQQWFAYASEGDVFFSVDEFPNYGQLSGQKL 63

Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           +  + G R P+   K+NPADF LWK + P EP WESPW  GRPGWHIEC AMS   L   
Sbjct: 64  ENHRAGERNPD-SRKQNPADFALWKAAKPGEPSWESPWVPGRPGWHIECGAMSVQCLTFK 122

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           FDIHGGG DLIFPH+ENE+ +S  A   E   + W+HNG +     KMSKS G
Sbjct: 123 FDIHGGGSDLIFPHYENEMTRSI-ATCQESNVSYWMHNGHVTNNNEKMSKSPG 174


>gi|332703394|ref|ZP_08423482.1| cysteine synthase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553543|gb|EGJ50587.1| cysteine synthase [Desulfovibrio africanus str. Walvis Bay]
          Length = 779

 Score =  205 bits (522), Expect = 1e-50,   Method: Composition-based stats.
 Identities = 92/487 (18%), Positives = 162/487 (33%), Gaps = 60/487 (12%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           ++ +++ +    +    +      + ++  GP++   + +   R +++ DVL R LR   
Sbjct: 306 QQGLRVRDLASGQARVLEPGKAG-LGLFTPGPSLDQASDLEVWRRVVLLDVLCRHLRANG 364

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +                    R    +            +  ++       L      H
Sbjct: 365 VQAKACV--------GLADLDDRALAAARAAGMPRREFARRTREEIQGLAAMLGVSEDVH 416

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              A     + + L + ++  G AYE    + +D      YG      ++   +G  V  
Sbjct: 417 FALAGESTERALTLCRRLLARGLAYEKLRSVYYDVLRDKAYGQTGSMDLERLSLGKTVDL 476

Query: 182 KYH-KKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           + + K NP DF L KR T          E+ WG+ RP W ++ +A +   L     +  G
Sbjct: 477 RDYVKDNPRDFTLLKRVTLQDLKAGDALETEWGKVRPSWFLQQAAAALDGL-PALSVALG 535

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHN----GFLNLEGRKMSKSNGNFITINELL 292
                FPH EN  A       +  TA  W+      G L+  G            + E +
Sbjct: 536 AETHRFPHLENFRAIWTLGAGVVPTA--WLVAQPVIGVLDSAGADAPGVQQPVFGLREAV 593

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKG 345
                G        +R+ +L T Y +P+  ++Q L        K              KG
Sbjct: 594 GAVSSGA------ALRMWLLSTSYHKPL--SLQSLPMWSRNWRKTQELYVTLSSAERKKG 645

Query: 346 IIDPAV-----------LSALYNDLNTVSAIQALHKLARESTKNHDL-----------LP 383
               AV            +A+ +DL+       L K  R       +           L 
Sbjct: 646 EPGQAVAQAAYDLRQGLFAAVEDDLSLHRFWPELFKFVRTINAKLAVGQLSGAGTELCLR 705

Query: 384 IFNASAHILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              A   +LGI    +       ++  + +LV+ R      K F  AD +R +L  KG+ 
Sbjct: 706 RLTACDQVLGILDHSQAPVSPSMLTAELAELVRLREEARGRKDFPQADDLRGRLWEKGYR 765

Query: 442 LEDYKNP 448
           LED  + 
Sbjct: 766 LEDTPSG 772


>gi|303249135|ref|ZP_07335375.1| cysteine synthase [Desulfovibrio fructosovorans JJ]
 gi|302489460|gb|EFL49407.1| cysteine synthase [Desulfovibrio fructosovorans JJ]
          Length = 767

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 91/466 (19%), Positives = 160/466 (34%), Gaps = 60/466 (12%)

Query: 21  IDPSNI--RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +DP+     ++  GP +     +   R ++  DVL R L    G + V  V  + D++D+
Sbjct: 317 LDPAGATPGLFTFGPPLAAPGDLDAWRRVVTLDVLRRTL-ARGGGRPVLAV-GLADLEDR 374

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
            ++ +R                +K   Q       L        P A   + + + + + 
Sbjct: 375 CLDASRA------AGVKCREFAAKARDQVAARAAALGVADA-RFPLAGEALDEALAMTRK 427

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-KYHKKNPADFILWKRS 197
           ++  G AYE    + FD +    YG      + +  +G  V    Y K NP DF L KR 
Sbjct: 428 LMSKGLAYEKLRSVYFDVARDKAYGGLLGTDMTKLALGKTVDLLAYAKDNPQDFTLLKRV 487

Query: 198 T----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           +           +PWG  RP W ++ +A +         +     D  FPH EN  A   
Sbjct: 488 SLKDLKAGDALSTPWGNVRPSWFLQMAAAAVKA-LPAVTVVLTDEDKTFPHLENLRAIWS 546

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
               +   A  W+  G   + GR+  ++           +             +R  +L 
Sbjct: 547 VGAGLSPAA--WLVGG--RVAGREGEEAGAA--------DLADLLALGVHPLAVRAWLLS 594

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------------DPAVLSAL 355
             YR+P+    + L   E   ++  + + + G+I                    ++ +A+
Sbjct: 595 VGYRKPLCAVPEALRMWEKNRNRVQELAANLGLIAAGGGKASDTVAAEAEKLTQSLDAAV 654

Query: 356 YNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGIE--VCKEHLN 402
            +DL        L    R +                L     ++  +LG+    C     
Sbjct: 655 ADDLAVFQFWPQLFAFCRFANGLIAAGSLTPADAARLAGALGSADGVLGLLDPACLPVAT 714

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
           +     + KLV  R      K F  AD IR  +E  G+ +ED    
Sbjct: 715 REWPAPVAKLVAAREQARNAKDFGKADAIRSDIEGLGYRVEDAPGG 760


>gi|195995945|ref|XP_002107841.1| hypothetical protein TRIADDRAFT_51757 [Trichoplax adhaerens]
 gi|190588617|gb|EDV28639.1| hypothetical protein TRIADDRAFT_51757 [Trichoplax adhaerens]
          Length = 764

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 87/359 (24%), Positives = 123/359 (34%), Gaps = 119/359 (33%)

Query: 105 QQFVKDTTR-----L--ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
           Q+F  D        L    L      R + ++P++I  +Q II   + Y +N  + FDT 
Sbjct: 240 QEFFSDIRDPLSELLDKKVLPADAITRVSEYVPEVIEFVQGIIKRNYGYVSNGSVYFDTV 299

Query: 158 SIPN-----YGSFSRRKIDEQKMGTRVPEK------------------------------ 182
           +  N     YG      I +        +                               
Sbjct: 300 AFNNSPDHRYGKLLPEAIGDLNALAEGEDNNKSNKLDSLICGLSNLSNSDAHLIGELSIG 359

Query: 183 ----YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
                 K++P DF LWK S P EP W+SPWG+GRPGWHIECS M+S  LGK  DIH GG+
Sbjct: 360 DDRLREKRSPNDFALWKCSKPGEPFWDSPWGKGRPGWHIECSVMASAILGKSLDIHSGGV 419

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DL FPHHENEIAQ   A                                           
Sbjct: 420 DLKFPHHENEIAQVEEALS----------------------------------------- 438

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA---- 354
              + A  +RLA L   +   +D++   ++        + +   +   ID  V SA    
Sbjct: 439 --KYSARQLRLAFLSHPWNTTMDYSENMMSSTMQTEKLFLEFFLNVKDID-RVYSAQTLK 495

Query: 355 -------------------------LYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
                                    L + +NT   ++ L +L  +S            S
Sbjct: 496 EEKWNSAELELEKGLCQKQNNIHRFLCDSINTPDVMKELKELINQSNSYIASKRSLKQS 554



 Score =  129 bits (325), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 1/105 (0%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           + ++K+YN++ R+   F   + S +  Y CGPTVYD +H+G+AR  + FD++ R+L  Y+
Sbjct: 4   EAQLKLYNSMTRRKDTFVPSNESCLSWYNCGPTVYDASHMGHARSYVSFDIIRRVLTSYF 63

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
               ++Y  NITDIDDKII RAR+ +       +   I       
Sbjct: 64  NYN-ISYAMNITDIDDKIIFRARRNYLIDNYISSSHPIDRIIEDA 107


>gi|258404957|ref|YP_003197699.1| cysteine synthase [Desulfohalobium retbaense DSM 5692]
 gi|257797184|gb|ACV68121.1| cysteine synthase [Desulfohalobium retbaense DSM 5692]
          Length = 764

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 93/483 (19%), Positives = 173/483 (35%), Gaps = 63/483 (13%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K+ +++ +    +      +  + + ++  GP   +       R ++  D+L R LR+  
Sbjct: 303 KQGMRLLDLQSGEKRH-IFVQKNALGVFTPGPGPEELEQPELWRRLVWADILVRYLRHKD 361

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            E     V  + D D+ +   A Q+     + +    +  +          RL      H
Sbjct: 362 FEVHG--VVGLADWDEHLSHLAEQQG--CNLQEMRGAMLDRAEAL----LRRLGLETGWH 413

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
              A+      + L + ++  G  YE    + +D     +YG   R  + +  +G  V  
Sbjct: 414 CQAASQCRETQLALCRELVRKGLGYEKLRSVYYDVGRDTDYGVLRRTDLAKLSLGKTVDL 473

Query: 181 EKYHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
           ++Y K NP DF L KR+          W++ WG  RP W+++ +A +    G   D+   
Sbjct: 474 DRYAKDNPRDFTLLKRTNLADLKRGDFWKTEWGNVRPSWYLQMAAAALAE-GIAMDVVLA 532

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G    FPH EN  A     + + +   +W+    +           G  I  +    +++
Sbjct: 533 GRAHHFPHMENLRALWAVRNALPQ---VWLMTQAV----------EGEAIVPDIETASER 579

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDP 349
            GG       +RL +L   YR+P+  +    T       +  ++           G +DP
Sbjct: 580 LGGMH----ALRLWLLSGGYRKPLHSSEDNATMWRRNWERLQESVATLHVARGEGGQVDP 635

Query: 350 AVLSALYN-----------DLNTVSAIQALHKLARESTKNHD---LLPIFNA-------- 387
                LY+           DL+       L  L R   K      L P+  A        
Sbjct: 636 GFEQTLYDVKTMFWDQLEDDLDLQHFWPVLWSLCRTILKKASQGRLAPVEAARGWKLVTD 695

Query: 388 SAHILGIEVC--KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
              ILG+                +   +  R    + + F+ AD +R+++ +KG+ LED 
Sbjct: 696 LDTILGVVDWHTLPLRQDQWPEGVRDRIALREQARRDRDFARADLLRQEIVAKGYRLEDT 755

Query: 446 KNP 448
              
Sbjct: 756 PQG 758


>gi|262043515|ref|ZP_06016633.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259039138|gb|EEW40291.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 164

 Score =  205 bits (521), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 67/167 (40%), Positives = 95/167 (56%), Gaps = 9/167 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           IK+ NTL  +      +  S I MYVCG TVYD  H+G+AR  + FD++ R LR+   + 
Sbjct: 2   IKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            VT+VRNITDIDDKII+RAR         +    +T +   +   D  +L  L P  +PR
Sbjct: 61  -VTFVRNITDIDDKIIQRARD------TGEDWRSLTERMVHEMHIDFAKLGILPPNIEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKI 170
            T HIPQ+I +I+ ++    AY A N +++F T+S   YG  S + I
Sbjct: 114 PTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDI 160


>gi|780131|gb|AAD09434.1| cysteinyl-tRNA synthetase [Buchnera aphidicola]
          Length = 178

 Score =  203 bits (518), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 9/185 (4%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NT   K   F+ I    I +YVCG TVYDF HIG+AR  +VFD++ R LR    + 
Sbjct: 2   LKIFNTATSKKEIFKPIKNKKINLYVCGVTVYDFCHIGHARTFVVFDMIVRYLRLIGFQ- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V Y+RNITDIDDKII ++ +E         IS  T+   ++  KD + L    P  +PR
Sbjct: 61  -VKYIRNITDIDDKIILKSLKEK------IDISAFTNIMIKEMNKDFSLLGISPPDEEPR 113

Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            TN+I  +I +I+ +I + +AY  +  ++IF  +S   YG+ SR+ +D+   GTR+    
Sbjct: 114 VTNYIIDIIKVIEKLIKNKNAYVNDHGDVIFSINSDKFYGTLSRQSLDKLISGTRISIDK 173

Query: 184 HKKNP 188
            KKN 
Sbjct: 174 EKKNS 178


>gi|239907708|ref|YP_002954449.1| cysteine synthase B [Desulfovibrio magneticus RS-1]
 gi|239797574|dbj|BAH76563.1| cysteine synthase B [Desulfovibrio magneticus RS-1]
          Length = 773

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 91/462 (19%), Positives = 164/462 (35%), Gaps = 68/462 (14%)

Query: 27  RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
            ++  GP + +   +   R ++  DVL R L    G    T    + D+DD+ ++ +R  
Sbjct: 325 GLFTFGPPLPEPGDLDAWRRIVTLDVLRRTLSRSGG--RPTLAVGLADLDDRCLDASRA- 381

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                         ++  +Q       L        P A   + + + L + ++  G AY
Sbjct: 382 -----AGRKCREYAAEAREQVAALAESLGVADA-VFPLAGEAMDEAMALARKLMDKGLAY 435

Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRS-----TPM 200
           E    + FD +    YG      + +  +G  V  + Y K +P DF L KR         
Sbjct: 436 EKLRSVYFDVARDKAYGGLLGLDMTKLCLGKTVDLDSYAKDHPRDFTLLKRVSLKDLKAG 495

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           +  W + WG  RP W ++ ++ +   L     +     D  FPH EN  A       +  
Sbjct: 496 DV-WATAWGNVRPSWFLQMASAAVRAL-PAVTVVATDEDKTFPHIENLRAVWAGGAGLAP 553

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
               W+  G   + GR+ +++     T+ +LL      G       +R  +L T Y +P+
Sbjct: 554 AV--WLVGG--RICGREGAEAVP---TLADLL------GYGVHPLTVRAWLLSTSYHKPL 600

Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGII-----------------DPAVLSALYNDLNTVS 363
               + L   E   ++  + +    +                  + A+ +AL  DL+   
Sbjct: 601 CAAPEALAMWERNRARIQELAAGLTLAAGEGQPSGAAQAEAEGLEAALEAALAEDLSVAQ 660

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHIL-----------------GIEVCKEHLNKNIS 406
              AL   AR++        +  A A                    G+ +   H      
Sbjct: 661 FWPALFAFARQANAGLAAGTLGGADAARHLAALAAADAALGLLDPAGLPLSPPHW----P 716

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
               +L++ R      K F+ AD +R+ +E+ G  LED    
Sbjct: 717 AEAARLIEARAQARAAKDFTRADALRRDIEAMGLRLEDAPGG 758


>gi|266623922|ref|ZP_06116857.1| cysteine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288864254|gb|EFC96552.1| cysteine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 215

 Score =  201 bits (512), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 60/229 (26%), Positives = 96/229 (41%), Gaps = 46/229 (20%)

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
           A  W+HN FLN++ RKMSKS GNF T+ E+ E        +   V+R  ML  HYR P++
Sbjct: 1   AKYWMHNAFLNIDNRKMSKSLGNFFTVREISE-------KYDLSVLRFFMLSAHYRSPLN 53

Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---------------------SALYNDLN 360
           F+ + +  ++  L +          ++   +                     +A+ +D N
Sbjct: 54  FSAELMESSKNGLERILTAVDKLKDLESRAVGDSFTEGESREAVDELVAKYEAAMDDDFN 113

Query: 361 TVSAIQALHKLARESTKNHD----------LLPIFNASAHILGIEVCKEHLNKNISIAIE 410
           T   I A+ +L + S               L         +LGI    E   + +   IE
Sbjct: 114 TADGISAVFELVKLSNSTAGADSSKAYVVYLKETIEKLCDVLGI--VTEKKEEMLDSEIE 171

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +++  R    K K F+ AD IR +L  KG +LED +         +WK+
Sbjct: 172 EMIAARQQARKDKNFALADEIRGKLLEKGIVLEDTR------EGVKWKR 214


>gi|255023445|ref|ZP_05295431.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 147

 Score =  197 bits (501), Expect = 4e-48,   Method: Composition-based stats.
 Identities = 55/153 (35%), Positives = 87/153 (56%), Gaps = 8/153 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  D  +L     T  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112

Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           PR T ++ ++I LI  +I  G+AYE+  ++ F 
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFR 145


>gi|261881617|gb|ACY04692.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  195 bits (496), Expect = 1e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANSPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881645|gb|ACY04706.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881647|gb|ACY04707.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  195 bits (495), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSMHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|261881607|gb|ACY04687.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  194 bits (494), Expect = 2e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ H+  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLDAMVRMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881613|gb|ACY04690.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  194 bits (493), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881605|gb|ACY04686.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (492), Expect = 3e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALTNTPYQIDIHAGGTDLLFPHHENEACQTRC 168


>gi|261881631|gb|ACY04699.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|261881633|gb|ACY04700.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (492), Expect = 4e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALTNAPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|261881663|gb|ACY04715.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSMYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881609|gb|ACY04688.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S     + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSMHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881657|gb|ACY04712.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881659|gb|ACY04713.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881661|gb|ACY04714.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N ++  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881619|gb|ACY04693.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (491), Expect = 5e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881689|gb|ACY04728.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881693|gb|ACY04730.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881717|gb|ACY04742.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881719|gb|ACY04743.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881721|gb|ACY04744.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881723|gb|ACY04745.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (490), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881611|gb|ACY04689.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRC 168


>gi|261881665|gb|ACY04716.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881667|gb|ACY04717.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881671|gb|ACY04719.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881673|gb|ACY04720.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881675|gb|ACY04721.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881677|gb|ACY04722.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881679|gb|ACY04723.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881669|gb|ACY04718.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 61/170 (35%), Positives = 93/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLAFTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881655|gb|ACY04711.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881623|gb|ACY04695.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881621|gb|ACY04694.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  193 bits (490), Expect = 7e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881651|gb|ACY04709.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVSMIKTLLEKNIAYRISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881705|gb|ACY04736.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRC 168


>gi|261881625|gb|ACY04696.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881627|gb|ACY04697.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (489), Expect = 8e-47,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGR 212
            DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSMHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881649|gb|ACY04708.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881681|gb|ACY04724.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881683|gb|ACY04725.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881685|gb|ACY04726.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881701|gb|ACY04734.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881715|gb|ACY04741.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (489), Expect = 9e-47,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N ++  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881635|gb|ACY04701.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (489), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881687|gb|ACY04727.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881695|gb|ACY04731.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881703|gb|ACY04735.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881707|gb|ACY04737.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881709|gb|ACY04738.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881711|gb|ACY04739.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881713|gb|ACY04740.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881727|gb|ACY04747.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881729|gb|ACY04748.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881731|gb|ACY04749.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881733|gb|ACY04750.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881735|gb|ACY04751.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881737|gb|ACY04752.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881739|gb|ACY04753.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881741|gb|ACY04754.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881743|gb|ACY04755.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881745|gb|ACY04756.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881747|gb|ACY04757.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881691|gb|ACY04729.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  192 bits (488), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENESCQTRC 168


>gi|261881643|gb|ACY04705.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  191 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 92/170 (54%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N ++  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S       + G R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN-SSMEFG-RIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|313585674|gb|ADR70979.1| CysS [Helicobacter pylori]
 gi|313585678|gb|ADR70981.1| CysS [Helicobacter pylori]
 gi|313585684|gb|ADR70984.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  191 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 69/195 (35%), Positives = 102/195 (52%), Gaps = 17/195 (8%)

Query: 56  LLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
            L +   E  V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L 
Sbjct: 1   TLEWSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALN 52

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK 174
              P+ +P+A+ ++  M+ +I+ ++    AY  +N +I  DTS   +YGS S        
Sbjct: 53  VKKPSLEPKASEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSV 110

Query: 175 MGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----G 228
             +R+     K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L      
Sbjct: 111 EFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAP 170

Query: 229 KVFDIHGGGLDLIFP 243
              DIH GG DL+FP
Sbjct: 171 YQIDIHAGGADLLFP 185


>gi|261881637|gb|ACY04702.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  191 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+++I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881653|gb|ACY04710.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  191 bits (487), Expect = 1e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881697|gb|ACY04732.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|261881699|gb|ACY04733.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  191 bits (487), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  +++   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSNIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881629|gb|ACY04698.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  191 bits (486), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGR 212
            DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSVHN--SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881725|gb|ACY04746.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  191 bits (485), Expect = 2e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY+ +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK        G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNNVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|261881615|gb|ACY04691.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  190 bits (484), Expect = 3e-46,   Method: Composition-based stats.
 Identities = 60/170 (35%), Positives = 90/170 (52%), Gaps = 9/170 (5%)

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANN 150
            N +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N 
Sbjct: 1   ENKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNG 60

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWG 209
           +I  DTS   +YGS S           R+     K+   DF+LWK      + G++SP G
Sbjct: 61  DIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLG 118

Query: 210 RGRPGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           +GRPGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 119 KGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|313585676|gb|ADR70980.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  190 bits (484), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/188 (35%), Positives = 100/188 (53%), Gaps = 15/188 (7%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  VRN TDIDDKII +A +E      N ++  ++S   + + +D   L    P+ +
Sbjct: 6   GYEVMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLE 59

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S          +R+  
Sbjct: 60  PKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGL 117

Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHG 235
              K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH 
Sbjct: 118 VQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALTDTPYQIDIHA 177

Query: 236 GGLDLIFP 243
           GG DL+FP
Sbjct: 178 GGADLLFP 185


>gi|170694948|ref|ZP_02886097.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
 gi|170140046|gb|EDT08225.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
          Length = 206

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 35/217 (16%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +HNG++ ++  KMSKS  NF TI E+L         + A V+R  +   HYR P++++  
Sbjct: 1   MHNGYVQIDNEKMSKSLNNFFTIREVLA-------QYDAEVVRFFIARAHYRSPLNYSDV 53

Query: 326 RLTEAEILLSKWPQTSTS----------KGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
            + +A   L +                          +A+ +D NT  A+  L +LA E 
Sbjct: 54  HIDDARNALGRLYTALKDVTPDGAALDWNEAHAQRFQAAMNDDFNTPVAVSVLFELATEV 113

Query: 376 TKNHD--LLPIFNASAHILGIE------VCKEHLNKNIS-----IAIEKLVQERLILLKM 422
            +  D  L     +   +LG+         ++     +       AIE  + ER+   + 
Sbjct: 114 NRTRDPALARQLRSLGAVLGLLGREPRAYLQQAAGAAVEGALEPAAIEAKIAERVAAKQA 173

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           K +++AD IR +L   G  LED         +T W++
Sbjct: 174 KDYAAADRIRAELLEAGVALEDKPGG-----LTEWRR 205


>gi|313585680|gb|ADR70982.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  190 bits (483), Expect = 4e-46,   Method: Composition-based stats.
 Identities = 66/188 (35%), Positives = 99/188 (52%), Gaps = 15/188 (7%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  VRN TDIDDKII +A +E      N ++  ++S   + + +D   L    P+ +
Sbjct: 6   GYEVMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLE 59

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+  
Sbjct: 60  PKASEYLDTMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGL 117

Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHG 235
              K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH 
Sbjct: 118 VQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHA 177

Query: 236 GGLDLIFP 243
           GG DL+FP
Sbjct: 178 GGADLLFP 185


>gi|313585670|gb|ADR70977.1| CysS [Helicobacter pylori]
 gi|313585682|gb|ADR70983.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  190 bits (483), Expect = 5e-46,   Method: Composition-based stats.
 Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 15/188 (7%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +
Sbjct: 6   GYEVVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLE 59

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+  
Sbjct: 60  PKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGL 117

Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHG 235
              K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH 
Sbjct: 118 VQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHA 177

Query: 236 GGLDLIFP 243
           GG DL+FP
Sbjct: 178 GGADLLFP 185


>gi|261881641|gb|ACY04704.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  190 bits (482), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGR 212
            DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSVHN--SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|313585672|gb|ADR70978.1| CysS [Helicobacter pylori]
          Length = 185

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 67/188 (35%), Positives = 99/188 (52%), Gaps = 15/188 (7%)

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
              V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +
Sbjct: 6   GYEVVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLE 59

Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
           P+A+ ++  M+ +I+ ++    AY+ +N +I  DTS   +YGS S           R+  
Sbjct: 60  PKASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGL 117

Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHG 235
              K+   DF+LWK      + G++SP G+GRPGWHIECS+M    L         DIH 
Sbjct: 118 VQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFETLALTNTPYQIDIHA 177

Query: 236 GGLDLIFP 243
           GG DL+FP
Sbjct: 178 GGADLLFP 185


>gi|270708936|ref|ZP_06223130.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270315728|gb|EFA27875.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 127

 Score =  189 bits (481), Expect = 6e-46,   Method: Composition-based stats.
 Identities = 56/134 (41%), Positives = 81/134 (60%), Gaps = 8/134 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +KI+NTL R+   F+ I  + + MYVCG TVYD  HIG+ R  + FDV+ R LR    + 
Sbjct: 2   LKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            +TYVRNITD+DDKII+RA +        +    +  +  Q+  KD   L  L P  +PR
Sbjct: 61  -LTYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEPR 113

Query: 125 ATNHIPQMIYLIQN 138
           AT+HIP++I +++ 
Sbjct: 114 ATHHIPEIIEIVEK 127


>gi|261881639|gb|ACY04703.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 168

 Score =  189 bits (480), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 59/167 (35%), Positives = 90/167 (53%), Gaps = 9/167 (5%)

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEII 153
           +I  ++S   + + +D   L    P+ +P+A+ ++  M+ +I+ ++    AY  +N +I 
Sbjct: 4   SIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIY 63

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGR 212
            DTS   +YGS S          +R+     K+   DF+LWK      + G++SP G+GR
Sbjct: 64  LDTSKDKDYGSLSVHN--SSMEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGR 121

Query: 213 PGWHIECSAMSSHYL-----GKVFDIHGGGLDLIFPHHENEIAQSCC 254
           PGWHIECS+M    L         DIH GG DL+FPHHENE  Q+ C
Sbjct: 122 PGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168


>gi|167465216|ref|ZP_02330305.1| cysteinyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 131

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 47/139 (33%), Positives = 81/139 (58%), Gaps = 8/139 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++++NT+ R+  EF+ + P  + MYVCGPTVY++ HIGN RP I FDV++R L Y   
Sbjct: 1   MTLRMFNTMTREKEEFKPVVPGKVSMYVCGPTVYNYIHIGNGRPAIFFDVVHRYLTYLGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           +  VTYV N TD+DDK+I +A +        + +  +  +  + +++D   L        
Sbjct: 61  D--VTYVVNFTDVDDKLIRKAEE------TGETVKELADRFIEAYLEDMEALGIRKADIN 112

Query: 123 PRATNHIPQMIYLIQNIIL 141
           PR T ++ ++I  I++++ 
Sbjct: 113 PRVTENMDEIISFIRSLVD 131


>gi|330948101|gb|EGH48361.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 107

 Score =  186 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 63/114 (55%), Positives = 74/114 (64%), Gaps = 8/114 (7%)

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
            P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FPHHENEIAQS  A  
Sbjct: 1   KPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATG 60

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            +  AN W+H G + + G KMSKS  NF TI ++LE        +   V+R  +
Sbjct: 61  -KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYHPEVVRYLL 106


>gi|283853744|ref|ZP_06370971.1| cysteine synthase [Desulfovibrio sp. FW1012B]
 gi|283570868|gb|EFC18901.1| cysteine synthase [Desulfovibrio sp. FW1012B]
          Length = 767

 Score =  186 bits (474), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 88/467 (18%), Positives = 160/467 (34%), Gaps = 62/467 (13%)

Query: 21  IDPSNI--RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +DP+     ++  GP + +   +   R ++  DVL R L    G    T    + D++D+
Sbjct: 317 LDPAGAVPGLFTFGPPLAEPGDLDAWRRVVTLDVLRRALSR--GPARPTLAVGLADLEDR 374

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
            ++ AR            +         +      L  ++    P A   + + + L + 
Sbjct: 375 SLDAARAAGQKC---RDFAEAARTRVAGY----AGLLGVSGAVFPLAGEALDEALALTRK 427

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-KYHKKNPADFILWKRS 197
           ++  G AYE    + FD +    YG      + +  +G  V    Y K NP DF L KR 
Sbjct: 428 LMGKGLAYEKLRSVYFDVARDKAYGRLLGTDMTKLALGKTVDLLAYAKDNPQDFTLLKRV 487

Query: 198 T----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           +           + WG  RP W ++ +A ++        +     D  FPH EN  A   
Sbjct: 488 SLKDLKAGDALATTWGNVRPSWFLQMAAAAAQA-LPAVTVVLTDEDKTFPHLENLRAIWA 546

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
               +   A  W+  G +   GR   ++      + +LL              +R  +L 
Sbjct: 547 VGAGLAPAA--WLAGGRVT--GRDGPEAKAPV--LGDLLAL------GVHPLTVRAWLLS 594

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT-VSAIQA----- 367
             Y +P+      L   E    +  + + + G+I     +A  + + T    +       
Sbjct: 595 IGYHKPLAAAPDALRMWERNRGRVQELAANLGLIPEGRGAA-SDAVETEAGGLGEALAAA 653

Query: 368 -------------LHKLAREST-----------KNHDLLPIFNASAHILGIEVCK--EHL 401
                        L    R +                LL     +  +LG+         
Sbjct: 654 VADDLSVFQFWPRLFAFCRFANGRLSAGRLPGADAARLLRALTEADAVLGLLDPARLPVP 713

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            +    A  +LV ER    + + F+ AD +R ++E  G+ +ED    
Sbjct: 714 GEAWPEAAARLVAERTRAREARDFARADALRAEIEGLGYRVEDTAEG 760


>gi|153827624|ref|ZP_01980291.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149737896|gb|EDM52801.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 191

 Score =  186 bits (472), Expect = 9e-45,   Method: Composition-based stats.
 Identities = 48/204 (23%), Positives = 80/204 (39%), Gaps = 36/204 (17%)

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GNF TI ++L         + A  +R  ++  HYR  ++++ + L +A   L +   
Sbjct: 1   KSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYI 53

Query: 340 TSTSKGIIDPA---------VLSALYNDLNTVSAIQALHKLARESTK--------NHDLL 382
                    PA           +A+ +D NT  A   L  +ARE  +           L 
Sbjct: 54  ALRGLDRSVPAAGGEEYVTRFTTAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALG 113

Query: 383 PIFNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
            +    A ++GI         +       +  IE L++ R      K +++AD  R +L 
Sbjct: 114 SLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 173

Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
             G +LED      G   T W++K
Sbjct: 174 EMGIVLED------GPNGTTWRRK 191


>gi|148690120|gb|EDL22067.1| mCG11180, isoform CRA_c [Mus musculus]
          Length = 226

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 57/166 (34%), Positives = 87/166 (52%), Gaps = 9/166 (5%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
           G   V    +ITD+DDKII+RA +      +N   + + S   ++F +D   L  L PT 
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTV 146

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPN-YGSF 165
             R T +IPQ+I  I+ II HGHAY  A   + FD  +  + YG  
Sbjct: 147 YLRVTENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKL 192


>gi|89266455|gb|ABD65519.1| hypothetical protein [Ictalurus punctatus]
          Length = 142

 Score =  185 bits (471), Expect = 1e-44,   Method: Composition-based stats.
 Identities = 69/142 (48%), Positives = 84/142 (59%), Gaps = 8/142 (5%)

Query: 154 FDTSSIP-NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
           FDT SI   YG                     K++P DF LWK   P+EP WESPWGRGR
Sbjct: 1   FDTRSIGSRYGKLVN-----MGNAAGESGSKDKRDPRDFALWKAWKPLEPFWESPWGRGR 55

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           PGWHIECS ++S   G   DIH GG+DL FPHHENEIAQ       ++  N ++H+G L+
Sbjct: 56  PGWHIECSTIASSVFGSQLDIHSGGIDLAFPHHENEIAQCEAYHNCDQWGNYFLHSGHLH 115

Query: 273 LEG--RKMSKSNGNFITINELL 292
           L+G   KMSKS  N+ITI  L+
Sbjct: 116 LKGSTEKMSKSLKNYITIKRLI 137


>gi|308081958|ref|NP_001183395.1| hypothetical protein LOC100501811 [Zea mays]
 gi|238011202|gb|ACR36636.1| unknown [Zea mays]
          Length = 178

 Score =  184 bits (467), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 58/138 (42%), Positives = 84/138 (60%), Gaps = 8/138 (5%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            ++ ++N+L ++   FQ      + MYVCG T YDF+HIG+AR  + FDVLYR L++   
Sbjct: 31  PQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 90

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           E  V YVRN TDIDDKII+RA +        + ++ ++S+   +F+ D T L CL PT +
Sbjct: 91  E--VEYVRNFTDIDDKIIKRANER------GETVTSLSSRFINEFLLDMTELQCLPPTCE 142

Query: 123 PRATNHIPQMIYLIQNII 140
           PR T HI  +I LI  + 
Sbjct: 143 PRVTEHIEHIIELITKVQ 160


>gi|330947053|gb|EGH47846.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 161

 Score =  181 bits (461), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 51/153 (33%), Positives = 78/153 (50%), Gaps = 16/153 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DL FPHHENEIAQS  A   +  AN W+H G + + G KMSKS  NF TI ++LE  
Sbjct: 1   GGSDLEFPHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-- 57

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----- 350
                 +   V+R  ++ +HYR  I+++   L E++  L ++        + +PA     
Sbjct: 58  -----KYHPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAF 112

Query: 351 ---VLSALYNDLNTVSAIQALHKLARESTKNHD 380
                +A+ +D  T  A   L ++ RE  +  +
Sbjct: 113 VERFSTAMNDDFGTPEACAVLFEMVREINRLRE 145


>gi|330720057|gb|EGG98482.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 182

 Score =  175 bits (443), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 77/185 (41%), Gaps = 30/185 (16%)

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
             +   V+R  ++ +HYR  I+++ + L +A+  L ++  T  +    + A         
Sbjct: 2   EKYNPEVVRYFLISSHYRSAINYSEESLKQAQQALERFYNTLRNAQPSNEAVPVVESNTE 61

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHD----LLPIFNASAHILGIEVCKEHL- 401
                 +A+ +D NT  A+  L  LARE  +        + +       LGI   +    
Sbjct: 62  FRIRFETAMNDDFNTPEALAVLFDLAREINRGGTSTPAQVELLKELGETLGILQQEPEAF 121

Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                  +  +  IE+L+ +R      K ++ AD IR  L  KG +L+D      G+  T
Sbjct: 122 LQGGDTGEISAEQIEQLIIDRKNARSDKDWARADEIRDLLIEKGVVLDD------GREGT 175

Query: 456 RWKQK 460
            W+++
Sbjct: 176 TWRRQ 180


>gi|2500965|sp|P77986|SYC_STAXY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
           Full=Cysteine--tRNA ligase; Short=CysRS
 gi|1514657|emb|CAA68888.1| cysteinyl-tRNA synthetase [Staphylococcus xylosus]
          Length = 118

 Score =  173 bits (438), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 52/125 (41%), Positives = 77/125 (61%), Gaps = 8/125 (6%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           I +YNTL R+   F+ I+P  ++MYVCGPTVY++ HIGNARP I +DV+ R   Y   E 
Sbjct: 2   ITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYE- 60

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V YV N TD+DDK+I+R+++      +++++  IT +  + F +D   L     T  PR
Sbjct: 61  -VIYVSNFTDVDDKLIKRSKE------LDESVETITDRYIKAFYEDVGALNVKKATSNPR 113

Query: 125 ATNHI 129
             NH+
Sbjct: 114 VMNHM 118


>gi|323141394|ref|ZP_08076285.1| DALR domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414143|gb|EFY04971.1| DALR domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 214

 Score =  171 bits (434), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 53/227 (23%), Positives = 92/227 (40%), Gaps = 57/227 (25%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GNF  + ++LE        +    +R  ++ THYR P+DF+  RLTEA+  L++ 
Sbjct: 1   MSKSLGNFFMVIDILE-------HYDPETLRFFIVSTHYRSPLDFSDARLTEAQKSLARL 53

Query: 338 PQTSTSKG----------------------IIDPAVLSALYNDLNTVSAIQALHKLARES 375
            Q   + G                       +  A + A+ +D NT  AI  +  LA+E 
Sbjct: 54  RQAQETLGELSEMLSAGPTAESLALREKVKELREAFMEAMRDDFNTALAISHMFALAKEI 113

Query: 376 TKNHDLL----------------PIFNASAHILGIE------VCKEHLNKNISIAIEKLV 413
              H  +                 +F  +  I+G+         +E  +   +  +E L+
Sbjct: 114 NIYHKAVVDAGIKPDGKLVAMFNDVFAETCSIIGVLEKTAAPAAEEAGDSKEAELVEMLI 173

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
             R    K K ++ AD +R +L   G +L+D        +  +W ++
Sbjct: 174 AMRQDARKNKNYALADELRNKLNEIGIVLQDT------PQGVKWSKQ 214


>gi|207093180|ref|ZP_03240967.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 128

 Score =  162 bits (410), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           + IY+T  ++   F+ +      +YVCGPTVYD AH+G+AR  I FD+L R L     E 
Sbjct: 1   MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V  VRN TDIDDKII +A +E      N +I  ++S   + + +D   L    P+ +P+
Sbjct: 60  -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112

Query: 125 ATNHIPQMIYLIQNI 139
           A+ ++  M+ +I+ +
Sbjct: 113 ASEYLDAMVGMIETL 127


>gi|293334393|ref|NP_001169895.1| hypothetical protein LOC100383789 [Zea mays]
 gi|224032219|gb|ACN35185.1| unknown [Zea mays]
          Length = 229

 Score =  160 bits (406), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/95 (63%), Positives = 72/95 (75%), Gaps = 1/95 (1%)

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
           K +   EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIFPHHENE+AQS  
Sbjct: 126 KAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPHHENELAQSQA 185

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           A    +    W+HNGF+N + +KM+KS+ NF  + 
Sbjct: 186 AYPESE-VKCWMHNGFVNKDDKKMAKSDNNFSRLE 219


>gi|46205378|ref|ZP_00048616.2| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 137

 Score =  157 bits (397), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 66/140 (47%), Positives = 85/140 (60%), Gaps = 16/140 (11%)

Query: 1   MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
           M   +++YNTL R+   F  IDP+N+RMY CGPTVYD A IGNARP+IVFD+L+RLLR+ 
Sbjct: 1   MTPMLRLYNTLTREKAAFAPIDPANVRMYACGPTVYDAAXIGNARPIIVFDLLFRLLRHL 60

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL--- 117
           YG   VTY RN+TD+DDKI  RA      +     I  +T     QF +D   L  L   
Sbjct: 61  YGAAHVTYARNVTDVDDKINARA------LERGITIRDLTDGTLAQFHEDLRDLGVLMAE 114

Query: 118 -------APTHQPRATNHIP 130
                   P ++PRAT+H+P
Sbjct: 115 DVIGRASRPAYRPRATDHMP 134


>gi|300813898|ref|ZP_07094202.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300511961|gb|EFK39157.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 189

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 76/187 (40%), Gaps = 34/187 (18%)

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------STS 343
           + +   ++R  +L T YR PI+F+ + + + +  L +                    +  
Sbjct: 3   KEYDLEILRFFLLTTSYRAPINFSREVMNQTKNALERLYNAKYKLEKDIELSKERALTED 62

Query: 344 KGIIDP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFN 386
           +  I+        +   A+ +DLNT  AI A+  L ++   N D           + +  
Sbjct: 63  EKKIEEKFQTHRQSFEKAMEDDLNTADAITAIFDLVKDINVNLDENSAKKLLEEGMSLLK 122

Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               ILGI + +E    ++   I  L++ER    K K F  AD IR +L  KG  ++D +
Sbjct: 123 TLTKILGI-MEREKNCDDLDEEILNLIKEREDARKNKDFKRADEIRDELLEKGIEIKDTR 181

Query: 447 NPDNGQR 453
                +R
Sbjct: 182 KGIEWKR 188


>gi|255018804|ref|ZP_05290930.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 207

 Score =  150 bits (379), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 50/204 (24%), Positives = 82/204 (40%), Gaps = 42/204 (20%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
            G+K SKS GNFIT++++L+            VIR  ML  HYR+PI      L +A+  
Sbjct: 2   GGKKXSKSLGNFITLHDVLKDN-------DPNVIRFFMLSVHYRKPITLNDAILEDAKNG 54

Query: 334 LSKW------------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
           L +                          +       +  A    + +D NT +AI   H
Sbjct: 55  LERLMIAYQNIDHRIQTDDGEYVEEVHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFH 114

Query: 370 KLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI 418
           +LA+ +               + L +    A +LG+++     +      +E L++ERL 
Sbjct: 115 ELAKRANIYLAKETVSINVLREFLSMMRLFAEVLGLKLENTQSDSLDDSEVEALIEERLQ 174

Query: 419 LLKMKKFSSADYIRKQLESKGFIL 442
               + F+ AD IR  L+ K + L
Sbjct: 175 ARNERNFARADEIRDILKRKKYYL 198


>gi|115753744|ref|XP_001191812.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
 gi|115928438|ref|XP_001180238.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
           purpuratus]
          Length = 163

 Score =  147 bits (371), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 45/152 (29%), Positives = 75/152 (49%), Gaps = 13/152 (8%)

Query: 2   KKKIKIYNTLER-------KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLY 54
           +  + + N+L         K      ++ +    + CGPTVYD AHIG+A   + FD++ 
Sbjct: 14  RTTVHVLNSLTAAHDRKSAKKEPLLLMNKNVATWFACGPTVYDSAHIGHASSYVRFDIIR 73

Query: 55  RLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
           R+L   + +  V  V  ITDIDDKII R+ +++           +     ++F +D   L
Sbjct: 74  RIL-AEFFQTSVVMVMGITDIDDKIIRRSHEQNLK-----DFRELAGFYEREFYQDMQHL 127

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
             L      R ++HIP+++  I NII +G+ Y
Sbjct: 128 NVLPANVYTRVSDHIPEILTFIDNIIRNGYGY 159


>gi|213857653|ref|ZP_03384624.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 177

 Score =  146 bits (370), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 31/183 (16%)

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLS 353
            A  +R  ++  HYR  ++++ + L +A   L +                    +   + 
Sbjct: 1   DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 60

Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK------- 398
           A+ +D NT  A   L  +ARE  +         + +       + +LG+   +       
Sbjct: 61  AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 120

Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W
Sbjct: 121 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTW 174

Query: 458 KQK 460
           ++K
Sbjct: 175 RRK 177


>gi|330946917|gb|EGH47752.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 165

 Score =  145 bits (367), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 29/168 (17%)

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSALYNDLNTVSAI 365
           +HYR  I+++   L E++  L ++        + +PA          +A+ +D  T  A 
Sbjct: 1   SHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAMNDDFGTPEAC 60

Query: 366 QALHKLARESTKNHD--------LLPIFNASAHILGI------EVCKEHLNKNISI-AIE 410
             L ++ RE  +  +        L       A +LG+      +  +      +    +E
Sbjct: 61  AVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGAEGRVDAAEVE 120

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            L+Q RL     K +  +D IR Q+ + G +LED K        T W+
Sbjct: 121 ALIQARLAARAAKDWGESDRIRDQITAMGVLLEDGK------GGTTWR 162


>gi|315301166|ref|ZP_07872435.1| cysteinyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630469|gb|EFR98333.1| cysteinyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 107

 Score =  143 bits (361), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 40/114 (35%), Positives = 64/114 (56%), Gaps = 8/114 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+I+FD + R   Y   
Sbjct: 1   MSIQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIIFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +  V +V N TD+DDK+I  A +      +   +  +  +    +  D  +L  
Sbjct: 61  D--VKFVSNFTDVDDKLIHAANE------LKLTVPEVADRFIGAYFNDVDQLNV 106


>gi|153824052|ref|ZP_01976719.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518424|gb|EAZ75647.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 159

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 61/165 (36%), Gaps = 29/165 (17%)

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLSALYNDLNTVSAIQALH 369
            ++++ + L +A   L +            PA           +A+ +D NT  A   L 
Sbjct: 1   QLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSVLF 60

Query: 370 KLARESTK--------NHDLLPIFNASAHILGIE------VCKEHLNKNISIAIEKLVQE 415
            +ARE  +           L  +    A ++GI         +       +  IE L++ 
Sbjct: 61  DMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKL 120

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           R      K +++AD  R +L   G +LED      G   T W++K
Sbjct: 121 RNDSRATKDWANADLARDKLNEMGIVLED------GPNGTTWRRK 159


>gi|149246694|ref|XP_001527772.1| cysteinyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447726|gb|EDK42114.1| cysteinyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 411

 Score =  142 bits (359), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 77/311 (24%), Positives = 120/311 (38%), Gaps = 89/311 (28%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M+S   G   DIH GG+DL FPHH+NE+AQS      ++  N ++HNG L+++G+KMSKS
Sbjct: 1   MASDVGGSQLDIHSGGVDLCFPHHDNELAQSEAYFDNDQWVNYFMHNGHLHIQGQKMSKS 60

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------- 333
             NFITI + L       + + A  +RL   ++ + +P+DF    ++E + +        
Sbjct: 61  LKNFITIQDAL-------KDYSARQLRLVFAVSSWDKPLDFKDSLISEVKSIESTFNKFF 113

Query: 334 -------------LSKWPQTSTSKGIIDP-----------AVLSALYNDLNTVSAIQALH 369
                        L K    S      +            AV SA  ++L++  AI+AL 
Sbjct: 114 SVVRALINDYKHKLEKGDHVSKKFTEAEKNLYSELEKTQLAVDSAFRDNLSSGQAIRALL 173

Query: 370 KLAREST-------------KNHDLLPIFNASAHILGIEVCK------EHLNKNISIA-- 408
            L   +              K   L+ + N    ILGI   +         +  +     
Sbjct: 174 DLVSNANSYIQATASGKVDLKVEILILVTNYILKILGILGLETRPDGLGWADSKVDAKDL 233

Query: 409 ---------------------IEKLVQERLILLK-------MKKFSSA-DYIRKQLESKG 439
                                ++ L Q R  +           KF  A D IR QL   G
Sbjct: 234 TGAGTGAGASSGSNEDTILPYVKALAQFRDTVRGLAIEKADNNKFLIATDTIRSQLLQLG 293

Query: 440 FILEDYKNPDN 450
             L+D  +  +
Sbjct: 294 VSLDDRPDGTS 304


>gi|296825514|ref|XP_002850827.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238838381|gb|EEQ28043.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 601

 Score =  140 bits (353), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 51/293 (17%)

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                +   + +T     +F+ D   L  L P    R   ++P+++  +  + L      
Sbjct: 157 ICCGSSICSTTLTKHYESRFIGDIRSLNVLNPDELTRVVAYVPEILCFLLRVGL------ 210

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
               I+   S   +Y     R  +         + + K     F+ +K    +E G+ + 
Sbjct: 211 ---FILILISLRNHYAKLEHRNRNN-----TSSDGWRK-----FLTFKEFCALE-GFPAR 256

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
            G   PGWHIECSAM+S  LG   DI+  G+DL F HH+NE+AQ+         +  W  
Sbjct: 257 -GTKLPGWHIECSAMTSAKLGNHMDINSRGIDLAFSHHDNEVAQNEV------FSLHWA- 308

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
               +L   + ++    F TI E+L                  + +  +RE I+ T   +
Sbjct: 309 ----SLIQAQRAQITPKFTTIREVLARSTI-------------IFLGGWREGIEITTDMV 351

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
             + I   K          +   + SAL N  +T +A+ A+ +LA   T+   
Sbjct: 352 DTSGIREEKL------NNFLKDKIFSALCNLFDTPTAMNAILELASSFTRAES 398


>gi|289523838|ref|ZP_06440692.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502922|gb|EFD24086.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 134

 Score =  137 bits (346), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 43/104 (41%), Positives = 60/104 (57%), Gaps = 8/104 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
           GG DLIFPHHENEIAQ+  A   ++    WIHNG+L +   KMSKS GN +T+ E+    
Sbjct: 1   GGSDLIFPHHENEIAQAEAATG-KQFVRFWIHNGYLLINKEKMSKSLGNILTVREIR--- 56

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
               +++    +RL +L  HYR P+DF+   L +A   L +   
Sbjct: 57  ----KNFQPLAVRLFILAAHYRSPLDFSDDSLIQATKSLQRLRN 96


>gi|315124324|ref|YP_004066328.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018046|gb|ADT66139.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 206

 Score =  136 bits (343), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 51/216 (23%), Positives = 79/216 (36%), Gaps = 47/216 (21%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS  N   I + L       + +    +R  +L +HYR    +++  L  A+  L K+
Sbjct: 1   MSKSLNNSFFIKDAL-------KEFMGEALRFYLLSSHYRSHFKYSLSDLENAKKRLDKF 53

Query: 338 PQTSTS-----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
            +                     K  I   +L  L +DLN   A+  L      +    D
Sbjct: 54  YRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISKALALLDDFISSANLELD 113

Query: 381 -----------LLPIFNASAHILGIEV------CKEHLNKNISIAIEKLVQERLILLKMK 423
                      +    +  A I G          +  ++K     IEKL+ ER    K K
Sbjct: 114 KESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEEREEIEKLILERTEAKKNK 173

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
            F++AD IR+QL SK   L +  N       T W++
Sbjct: 174 DFNTADAIREQLNSKKITLLNTPN------GTIWEK 203


>gi|149246696|ref|XP_001527773.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447727|gb|EDK42115.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 188

 Score =  134 bits (339), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 9/115 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             ++IYN+L R   EF ++ P  +  Y CGPTVYD +H+G+AR  +  D+  R+L+ Y+G
Sbjct: 51  SPLRIYNSLTRSKDEFISLQPGQVTWYSCGPTVYDHSHMGHARNYVSTDICRRILQDYFG 110

Query: 63  EKCVTYVRNITDIDDKIIERARQEH--------PSIPINDAISIITSKNTQQFVK 109
              V +++N+TDIDDKII  ARQ++             ND ++  +    Q +++
Sbjct: 111 YN-VKFIQNVTDIDDKIIIAARQQYLFDEKIASVYTEKNDELTNQSKVYLQYYIE 164


>gi|289812154|ref|ZP_06542783.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 117

 Score =  134 bits (338), Expect = 3e-29,   Method: Composition-based stats.
 Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 7/123 (5%)

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           + YVRNITDIDDKII+RA +        ++   +  +   +  +D   L  L P  +PRA
Sbjct: 1   MKYVRNITDIDDKIIKRANEN------GESFVALVDRMIAEMHQDFDALNILRPDSEPRA 54

Query: 126 TNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           T+HI ++I L + +I  GHAY A+  +++FD  + P YG  SR+ +++ + G RV     
Sbjct: 55  THHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDV 114

Query: 185 KKN 187
           K+N
Sbjct: 115 KRN 117


>gi|332708899|ref|ZP_08428870.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332352441|gb|EGJ32010.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 201

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 69/205 (33%), Gaps = 55/205 (26%)

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------------ 340
             +RL +LM  YR+P+DFT   +  A        +                         
Sbjct: 1   MAVRLFVLMAQYRKPVDFTDDAIASATNGWQTLKEGLLFGHNYGIQLGWQDQSATPKPSQ 60

Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------- 382
                 S   I      A+ +DLN    +  L ++A+   +  ++L              
Sbjct: 61  PLQDDLSNKTIAQQFQEAVDDDLNFAGGLAVLFEVAKGLRREGNILVHQGKTETPASELE 120

Query: 383 ---PIFNASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
                    A +LG+E   E       +      IE L+Q+R    K K F  +D IR  
Sbjct: 121 QQWRSLVELAEVLGLEAQPEEEAEVSTDGLSDGEIEALIQQRAEARKTKNFELSDRIRDD 180

Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
           L+++G  L D      G  +T W +
Sbjct: 181 LQAQGITLID-----QGGGVTTWHR 200


>gi|255026265|ref|ZP_05298251.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 99

 Score =  133 bits (335), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 8/107 (7%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             I+I+NTL+R+   F+ +    ++MYVCGPTVY++ HIGNARP+IVFD + R   Y   
Sbjct: 1   MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
           +  V +V N TD+DDK+I  A +   ++P       +  +    +  
Sbjct: 61  D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFD 99


>gi|213024399|ref|ZP_03338846.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 78

 Score =  133 bits (334), Expect = 8e-29,   Method: Composition-based stats.
 Identities = 41/78 (52%), Positives = 50/78 (64%)

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
           FD  + P YG  SR+ +++ + G RV     K+NP DF+LWK S   EP W SPWG GRP
Sbjct: 1   FDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRP 60

Query: 214 GWHIECSAMSSHYLGKVF 231
           GWHIECSAM+   LG  F
Sbjct: 61  GWHIECSAMNCKQLGNHF 78


>gi|328478464|gb|EGF48188.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 116

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 46/92 (50%), Positives = 58/92 (63%), Gaps = 4/92 (4%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          + +YNT+ R+   F+ + P  IRMYVCGPTVY++ HIGNAR  I FD + R   Y   + 
Sbjct: 2  LTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGFK- 60

Query: 65 CVTYVRNITDIDDKIIERARQ--EHPSIPIND 94
           VTYV N TD+DDKII  A +  E P I  ND
Sbjct: 61 -VTYVSNFTDVDDKIITAAHKTGEAPLIWRND 91


>gi|198413558|ref|XP_002119777.1| PREDICTED: similar to cysteinyl-tRNA synthetase, partial [Ciona
           intestinalis]
          Length = 336

 Score =  133 bits (334), Expect = 9e-29,   Method: Composition-based stats.
 Identities = 40/83 (48%), Positives = 56/83 (67%), Gaps = 1/83 (1%)

Query: 5   IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +K++N+L R+   F   + + ++ Y CGPTVYD +H+G+AR  I FD+L R+L  Y+G  
Sbjct: 32  LKLFNSLTRQKEVFIPENGNFVKWYSCGPTVYDASHMGHARSYISFDILRRVLMDYFGYN 91

Query: 65  CVTYVRNITDIDDKIIERARQEH 87
            V Y  NITDIDDKII RAR  +
Sbjct: 92  -VLYCMNITDIDDKIITRARHNY 113



 Score =  131 bits (329), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
            ++    +  N   S +     +++ +D   L    P    R ++++P+++  ++ II +
Sbjct: 196 DKKHGAGVTDNSIFSALPQYWEREYFEDMDALNVSPPDVLTRVSDYVPEIVKYVEEIIKN 255

Query: 143 GHAYEANNEIIFDTSSIPN-----Y--------GSFSRRKIDEQKMGTRVPEKYHKKNPA 189
           G+ Y++N  + F  S   +     Y        G     +  E  + +   +   K+ P 
Sbjct: 256 GYGYKSNGSVYFSVSQFDSSDDHFYARLVPEAVGDLQALQEGEGSLSSVADQLNEKRAPN 315

Query: 190 DFILWKRSTPMEPGWESPWGR 210
           DF LWK S P EP WESPWG+
Sbjct: 316 DFALWKASKPGEPSWESPWGK 336


>gi|221118260|ref|XP_002160433.1| PREDICTED: similar to cysteinyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 170

 Score =  132 bits (333), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 39/95 (41%), Positives = 58/95 (61%), Gaps = 1/95 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
           K ++ +YN+L R+   F     + +  Y CGPTVYD +H+G+AR  I FD+L R++  Y+
Sbjct: 40  KSQLHLYNSLTRETNLFVPQSGNKVTWYSCGPTVYDASHMGHARSYITFDILRRVMSDYF 99

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
               + YV NITD+DDKII RAR+ H      ++ 
Sbjct: 100 -NFDIFYVMNITDVDDKIINRARRNHLMKQFRESN 133


>gi|312093145|ref|XP_003147582.1| hypothetical protein LOAG_12019 [Loa loa]
 gi|307757252|gb|EFO16486.1| hypothetical protein LOAG_12019 [Loa loa]
          Length = 274

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + +YN+  RK   F  + P  I+ Y+CGPTVYD +HIG+AR  + FD+L R+L+ Y+
Sbjct: 30  PPHLYLYNSFTRKKELFVPLKPKQIKWYICGPTVYDSSHIGHARAYLSFDILRRVLQDYF 89

Query: 62  GEKCVTYVRNITDIDDKIIERARQ 85
           G   + Y+ NITDIDDKII+RARQ
Sbjct: 90  GYD-IQYIMNITDIDDKIIKRARQ 112



 Score = 70.3 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 27/53 (50%)

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
           +  K   +F+ D   L  L PT   R + ++P++I  ++ II +G+ Y   + 
Sbjct: 221 LAKKYENEFLYDMACLNVLPPTVLTRVSEYVPEIIAYVEKIIDNGYGYATKDG 273


>gi|213023784|ref|ZP_03338231.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 167

 Score =  132 bits (332), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 67/173 (38%), Gaps = 31/173 (17%)

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLSALYNDLNTVS 363
             HYR  ++++ + L +A   L +                    +   + A+ +D NT  
Sbjct: 1   SGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFNTPE 60

Query: 364 AIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK--------EHLNKNISI 407
           A   L  +ARE  +         + +       + +LG+   +           +     
Sbjct: 61  AYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDGEVA 120

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
            IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W++K
Sbjct: 121 EIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWRRK 167


>gi|471728|gb|AAA17656.1| cysteinyl-tRNA synthetase homolog [Helicobacter pylori]
          Length = 188

 Score =  130 bits (327), Expect = 5e-28,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 31/189 (16%)

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV 351
           K   +++   ++R  +L  HYR  ++F  + L  ++  L K  +       + G I+P  
Sbjct: 4   KDALKNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGNLGGINPNF 63

Query: 352 ----LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
               L  + +DLN   A+  L  +   + +  D           +L        +LGI  
Sbjct: 64  KKEILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGF 123

Query: 397 CKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
                      +++    IE  ++ER    + K F  AD+IR++L  +   L D      
Sbjct: 124 KDPSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADHIREELLKQKIALMDT----- 178

Query: 451 GQRMTRWKQ 459
             + T W++
Sbjct: 179 -PQGTIWEK 186


>gi|289811526|ref|ZP_06542155.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
          serovar Typhi str. AG3]
          Length = 70

 Score =  129 bits (324), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 36/71 (50%), Positives = 47/71 (66%), Gaps = 2/71 (2%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
          +KI+NTL R+  EF+ I    + MYVCG TVYD  HIG+ R  + FDV+ R LR+   + 
Sbjct: 2  LKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYK- 60

Query: 65 CVTYVRNITDI 75
           + YVRNITDI
Sbjct: 61 -LKYVRNITDI 70


>gi|330948819|gb|EGH49079.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 62

 Score =  128 bits (323), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 43/62 (69%), Positives = 48/62 (77%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K++P DF+LWK   P EP WESPWG GRPGWHIECS MS+  LG+ FDIHGGG DL FP 
Sbjct: 1   KEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPR 60

Query: 245 HE 246
           HE
Sbjct: 61  HE 62


>gi|303236114|ref|ZP_07322716.1| DALR domain protein [Prevotella disiens FB035-09AN]
 gi|302483696|gb|EFL46689.1| DALR domain protein [Prevotella disiens FB035-09AN]
          Length = 185

 Score =  128 bits (322), Expect = 2e-27,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 61/188 (32%), Gaps = 40/188 (21%)

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GII 347
             IR  +L  HYR  +DF+ + L  A+    K                           +
Sbjct: 1   MTIRFFILSAHYRGTVDFSNEALQAAQKGYEKLMNAIEDLKRVQTADKSDENTAKFVAEL 60

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------------SAHILGI 394
                 A+ +DL T + I  L +         D     +              +  ILG+
Sbjct: 61  RQKCYDAMNDDLMTPTVISHLFEACHTINLLIDHKAQIDETDLKELSETVNLFAFDILGL 120

Query: 395 EVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
              +   N     A    ++ +++ R      K+++ +D IR  L   GF ++D K+   
Sbjct: 121 INERGANNDAREEAYGKVVDMVLELRAKAKANKEWAVSDQIRDALADAGFQVKDTKD--- 177

Query: 451 GQRMTRWK 458
                 WK
Sbjct: 178 ---GVTWK 182


>gi|225710076|gb|ACO10884.1| Cysteinyl-tRNA synthetase, cytoplasmic [Caligus rogercresseyi]
          Length = 122

 Score =  127 bits (320), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 41/104 (39%), Positives = 60/104 (57%), Gaps = 2/104 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              + +YN+L ++   F     S +  Y CGPTVYD +H+G+AR  + FD+L R++  Y+
Sbjct: 20  SPGLSLYNSLTKRKEVFVP-RGSTVTWYNCGPTVYDASHMGHARTYLSFDILRRVMSKYF 78

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQ 105
           G     YV NITDIDDKII+R+RQ H     +D   +   +  Q
Sbjct: 79  GYNIF-YVMNITDIDDKIIKRSRQNHLFKDYSDNKELKLDQIIQ 121


>gi|76154769|gb|AAX26189.2| SJCHGC03758 protein [Schistosoma japonicum]
          Length = 230

 Score =  126 bits (317), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 3   KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
             + +YN+L  +   F   D   ++ Y CGPTVYD +H+G+AR  IVFDV+ R+L  Y+ 
Sbjct: 59  PNVYLYNSLTLRKDLFVPQDERCVKWYTCGPTVYDVSHMGHARTYIVFDVIRRVLMDYFN 118

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
            K V YV NITDIDDKII+RARQ H           + 
Sbjct: 119 FK-VIYVLNITDIDDKIIKRARQNHLISDYQLKDPDLA 155


>gi|297721797|ref|NP_001173262.1| Os03g0143300 [Oryza sativa Japonica Group]
 gi|255674196|dbj|BAH91990.1| Os03g0143300 [Oryza sativa Japonica Group]
          Length = 98

 Score =  126 bits (316), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 2/81 (2%)

Query: 2  KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
            +++++N++ +K   F+ +    +RMYVCG T YDF+HIG+AR  + FDVLYR L++  
Sbjct: 8  TPQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLG 67

Query: 62 GEKCVTYVRNITDIDDKIIER 82
           E  V YVRN TDIDDK +  
Sbjct: 68 YE--VEYVRNFTDIDDKFLSC 86


>gi|190409217|gb|EDV12482.1| hypothetical protein SCRG_03371 [Saccharomyces cerevisiae RM11-1a]
          Length = 123

 Score =  125 bits (315), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 38/100 (38%), Positives = 58/100 (58%), Gaps = 2/100 (2%)

Query: 5   IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +K+YN+L R   EF     +  +  Y CGPTVYD +H+G+AR  +  D+  R+++ Y+G 
Sbjct: 23  LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQDYFGY 82

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
             V +V+N+TDIDDKII RARQ +              ++
Sbjct: 83  D-VQFVQNVTDIDDKIILRARQNYLFDNFVKENDTKFQRH 121


>gi|325656978|gb|ADZ38982.1| CysS [Transformation and cloning vector pVCC]
          Length = 171

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 31/175 (17%)

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV----LSALYNDLNT 361
            +L  HYR  ++F  + L  ++  L K  +       + G I+P      L  + +DLN 
Sbjct: 1   YLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQDDLNV 60

Query: 362 VSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHL------NKN 404
             A+  L  +   + +  D           +L        +LGI             +++
Sbjct: 61  SKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPSAYFQLGVSES 120

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
               IE  ++ER    + K F  AD IR++L  +   L D        + T W++
Sbjct: 121 EKQEIENKIEERKRAKEQKNFLKADSIREELLKQKIALMDT------PQGTIWEK 169


>gi|62087208|dbj|BAD92051.1| cysteine-tRNA ligase isoform b variant [Homo sapiens]
          Length = 281

 Score =  121 bits (303), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 1/88 (1%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
               F   D   +  Y CGPTVYD +H+G+AR  I FD+L R+L+ Y+ +  V Y  NIT
Sbjct: 58  TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYF-KFDVFYCMNIT 116

Query: 74  DIDDKIIERARQEHPSIPINDAISIITS 101
           DIDDKII+RARQ H      +       
Sbjct: 117 DIDDKIIKRARQNHLFEQYREKRPEAAQ 144



 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
              +  N   S +       F +D   L  L P    R + ++P+++  +Q I+ +G+
Sbjct: 223 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGY 280


>gi|225466980|ref|XP_002268953.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
 gi|225468419|ref|XP_002263606.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
          Length = 78

 Score =  118 bits (296), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 33/76 (43%), Positives = 50/76 (65%), Gaps = 2/76 (2%)

Query: 3  KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++++YNT+ ++    + +    + MYVCG T YD +H+G+ R  + FDVLYR L++   
Sbjct: 5  TELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGY 64

Query: 63 EKCVTYVRNITDIDDK 78
          E  VTYVRN TD+DDK
Sbjct: 65 E--VTYVRNFTDVDDK 78


>gi|313611176|gb|EFR85996.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 125

 Score =  116 bits (291), Expect = 7e-24,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 11/120 (9%)

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGI 394
            +  A    + +D NT +AI   H+LA+ +               + L +    A +LG+
Sbjct: 6   ELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLFAEVLGL 65

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
           ++     +      +E L++ERL     + F+ AD IR  L+ K  ILED       +R 
Sbjct: 66  KLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGTRFRRG 125


>gi|25395240|pir||A87730 protein Y23H5A.1 [imported] - Caenorhabditis elegans
          Length = 230

 Score =  114 bits (287), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 1/73 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
             ++ +YN+L R+   F   + + +  Y+CGPTV D +H+G+AR  +  D+L R+ R Y+
Sbjct: 95  PPQLTVYNSLTRQKEVFVPNEGARVGWYICGPTVNDSSHMGHARSYLSLDILRRVFRDYF 154

Query: 62  GEKCVTYVRNITD 74
           G   V ++ NITD
Sbjct: 155 GYD-VEFIMNITD 166


>gi|311266558|ref|XP_003131141.1| PREDICTED: hypothetical protein LOC100515683 [Sus scrofa]
          Length = 283

 Score =  113 bits (282), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              +K+YN+L R+              Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 43  DTGVKVYNSLTRRKDPLIVSSADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 102

Query: 62  GEKCVTYVRNITDIDDKIIERARQ 85
           G   V  V  +TD+DDKII+RA +
Sbjct: 103 GC-SVVMVMGVTDVDDKIIKRANE 125


>gi|239610479|gb|EEQ87466.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 279

 Score =  110 bits (276), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 51/115 (44%), Gaps = 12/115 (10%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K+YN+L R    F   DP    +  Y CGPTVYD AH+G+ R  +  D++ R+++ Y
Sbjct: 22  SPLKMYNSLTRSKNAFIPKDPEGHRVTWYSCGPTVYDDAHLGHPRNYVTTDIIRRIMQDY 81

Query: 61  YGEKCVT----------YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQ 105
           +    +           YV     +DD +++ AR    +     A      + T 
Sbjct: 82  FHFNIIVRARQQHLISDYVAKHPVVDDHVVKTARMAFSAFLKGVAPKADEEQTTA 136


>gi|12846272|dbj|BAB27101.1| unnamed protein product [Mus musculus]
          Length = 143

 Score =  109 bits (274), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 2   KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
              ++++N+L  +           +  Y CGPTVYD AH+G+A   + FD++ R+L   +
Sbjct: 34  DTGVQVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVF 93

Query: 62  GEKCVTYVRNITDIDDKIIERARQ 85
           G   V    +ITD+DDKII+RA +
Sbjct: 94  GCN-VVMAMSITDVDDKIIKRANE 116


>gi|227885421|ref|ZP_04003226.1| conserved hypothetical protein [Escherichia coli 83972]
 gi|227837606|gb|EEJ48072.1| conserved hypothetical protein [Escherichia coli 83972]
          Length = 80

 Score =  109 bits (273), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 8/88 (9%)

Query: 25  NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            + MYVCG T+YD  HIG+ R  + FDV+ R LRY      + YVRN+TD+DDKII RA 
Sbjct: 1   KVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGY--SLNYVRNVTDVDDKIIRRAA 58

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTT 112
           + H      +    +T +   +   D  
Sbjct: 59  ENH------ETCDQLTERMLAEMHADFD 80


>gi|269468022|gb|EEZ79747.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 118

 Score =  107 bits (268), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 19/122 (15%)

Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDL-LPIFNASAHILG-----IEVCKEHLNKN 404
             +AL +D NT  A+  L +LA+      D  +   NA + +L      I + +   +  
Sbjct: 2   FNAALDDDFNTPIALSILFELAKAVNLQRDQDIDQANALSQLLQKLGSYIGILQTDADSF 61

Query: 405 I-------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +          I+  +++R      K F+ +D IR +L   G ILED  N       T W
Sbjct: 62  LKRGVDLADEDIDAKIKQRDEAKANKDFALSDQIRDELTKLGIILEDSAN------GTSW 115

Query: 458 KQ 459
           ++
Sbjct: 116 RR 117


>gi|156349415|ref|XP_001622048.1| hypothetical protein NEMVEDRAFT_v1g15338 [Nematostella vectensis]
 gi|156208453|gb|EDO29948.1| predicted protein [Nematostella vectensis]
          Length = 136

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)

Query: 18 FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
          F   +   +  Y CGPTVYD +H+G+AR  I FD++ R+L+ Y+       V N+TDIDD
Sbjct: 7  FIPSNGRRVTWYSCGPTVYDASHMGHARSYITFDIVRRVLQSYFNYDVFC-VMNVTDIDD 65

Query: 78 KIIERARQEHPSIPIND 94
          KII RAR+ H      +
Sbjct: 66 KIIHRARRNHLQEKYRE 82


>gi|327349091|gb|EGE77948.1| hypothetical protein BDDG_00885 [Ajellomyces dermatitidis ATCC
           18188]
          Length = 284

 Score =  106 bits (266), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 12/95 (12%)

Query: 3   KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             +K+YN+L R    F   DP    +  Y CGPTVYD AH+G+ R  +  D++ R+++ Y
Sbjct: 22  SPLKMYNSLTRSKNAFIPKDPEGHRVTWYSCGPTVYDDAHLGHPRNYVTTDIIRRIMQDY 81

Query: 61  YGEKCVT----------YVRNITDIDDKIIERARQ 85
           +    +           YV     +DD +++ AR 
Sbjct: 82  FHFNIIVRARQQHLIADYVAKHPVVDDHVVKTARM 116


>gi|218678400|ref|ZP_03526297.1| cysteinyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 117

 Score =  105 bits (262), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 47/116 (40%), Positives = 73/116 (62%)

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
              D  VL+AL +DLNTV+A+QALH LA+ +  +      F A+A +LG+   K  +++ 
Sbjct: 1   AEPDETVLNALADDLNTVAAVQALHALAQAAHSDPAAAARFAATASLLGLLPKKAEIDEA 60

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           ++ A++ LV  RL +LK K F+ AD IR +L +KG  L+D K+   G+R+T W+ K
Sbjct: 61  VAAAVDALVAMRLEMLKAKNFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 116


>gi|75760639|ref|ZP_00740668.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74491882|gb|EAO55069.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 136

 Score =  102 bits (254), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 20/121 (16%)

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCK 398
           A   A+ +D NT +AI  L+ +A  + +               +        ILG+E+ +
Sbjct: 24  AFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELTQ 83

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           E L       +    Q+R+   K + F+ +D IR  L+ +  ILED        + TRWK
Sbjct: 84  EELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKGRNIILEDT------AQGTRWK 134

Query: 459 Q 459
           +
Sbjct: 135 R 135


>gi|326473872|gb|EGD97881.1| hypothetical protein TESG_05385 [Trichophyton tonsurans CBS 112818]
          Length = 306

 Score =  101 bits (253), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 8/114 (7%)

Query: 3   KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
             ++I+++L R  T F  +D    ++  + CGPTVYD A  G+AR  ++ D+  R++R Y
Sbjct: 24  PPLRIWSSLTRSETAFIPVDYVGKSVTWHTCGPTVYDNAQSGHARNYVITDIPPRIMRDY 83

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
           + +  V ++ NI D+DDK+I R RQ+H                    V D  +L
Sbjct: 84  F-KFNVKFIMNIADVDDKVISRVRQQHLFAEYKAKYP-----FIDTKVLDMAQL 131



 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%)

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
            +T     +F+ D  RL  L      RAT+++P++I  I+ I
Sbjct: 264 TLTRTFETRFLDDMRRLNLLDLDELIRATSYLPEIIQFIEKI 305


>gi|309803792|ref|ZP_07697878.1| DALR domain protein [Lactobacillus iners LactinV 11V1-d]
 gi|308164201|gb|EFO66462.1| DALR domain protein [Lactobacillus iners LactinV 11V1-d]
          Length = 110

 Score =  101 bits (251), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 20/114 (17%)

Query: 355 LYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGIEVCKEHLNK 403
           + +D N  +A+  +H+L                   D + + +    I G+++  E  N 
Sbjct: 1   MDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDEWLLIFGVKITTEMEND 60

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           +    ++KLV +R +  + K ++++D IR +L +KG ILED        + TRW
Sbjct: 61  D---TVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT------PQGTRW 105


>gi|289607157|emb|CBI60873.1| unnamed protein product [Sordaria macrospora]
          Length = 114

 Score =  100 bits (249), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/72 (43%), Positives = 46/72 (63%), Gaps = 3/72 (4%)

Query: 4   KIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
            + ++N+L R    F+ +DP   +R+Y CGPTVY++AHIGN R  +  D L R+LR+   
Sbjct: 45  PLTLHNSLTRSPQRFEPLDPEKGVRVYSCGPTVYNYAHIGNLRAYVFTDTLSRVLRWKGY 104

Query: 63  EKCVTYVRNITD 74
              +T+V NITD
Sbjct: 105 --ALTHVINITD 114


>gi|225464766|ref|XP_002265714.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 58

 Score = 99.5 bits (247), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 36/55 (65%)

Query: 2  KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRL 56
            ++++YNT+ ++   F+ +    + MYVCG T YD +H+G+AR  + FDVLYR 
Sbjct: 4  TTELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRF 58


>gi|242036955|ref|XP_002465872.1| hypothetical protein SORBIDRAFT_01g047370 [Sorghum bicolor]
 gi|241919726|gb|EER92870.1| hypothetical protein SORBIDRAFT_01g047370 [Sorghum bicolor]
          Length = 94

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 10/79 (12%)

Query: 2  KKKIKIYNTLERKITEFQAID----------PSNIRMYVCGPTVYDFAHIGNARPMIVFD 51
            ++K++N++ R+   FQ                + MYVCG T YDF H+GN R  +VFD
Sbjct: 7  PPQLKLFNSMTRRKEPFQPASSRKEPFQPAVDGKVTMYVCGVTPYDFCHMGNGRAFVVFD 66

Query: 52 VLYRLLRYYYGEKCVTYVR 70
          VLYR L    G+   + V+
Sbjct: 67 VLYRYLSAPSGDPLDSLVQ 85


>gi|260891412|ref|ZP_05902675.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260858795|gb|EEX73295.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 146

 Score = 99.2 bits (246), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 24/139 (17%)

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------------NH 379
           K          +      A+  D+NT  A+  +    RE+ K                  
Sbjct: 3   KIQSFLKKLKNLIKKFEEAMNEDMNTPQALATIFDQIRETNKFISTNENEFSTIYYEIKK 62

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYI 431
               +     ++ GI +  E+  K             IE L++ R      K F  +D I
Sbjct: 63  SYDSLKAKLENVFGIAIEVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSDEI 122

Query: 432 RKQLESKGFILEDYKNPDN 450
           R +L++ G  ++D K+   
Sbjct: 123 RDELKALGVEIKDNKDGST 141


>gi|119384075|ref|YP_915131.1| cysteinyl-tRNA synthetase-like [Paracoccus denitrificans PD1222]
 gi|119373842|gb|ABL69435.1| Cysteinyl-tRNA synthetase-like protein [Paracoccus denitrificans
          PD1222]
          Length = 124

 Score = 98.8 bits (245), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/57 (52%), Positives = 40/57 (70%)

Query: 5  IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          + + N+L  +   F   +P  +R+YVCGPTVYD+AHIGNARP +VFDVL R+ R  Y
Sbjct: 3  LFLTNSLGGEKQPFIPRNPREVRIYVCGPTVYDYAHIGNARPAVVFDVLVRVFRLSY 59


>gi|317145384|ref|XP_003189699.1| hypothetical protein AOR_1_280144 [Aspergillus oryzae RIB40]
          Length = 296

 Score = 97.6 bits (242), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/87 (42%), Positives = 52/87 (59%), Gaps = 3/87 (3%)

Query: 15 ITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
          IT F A+DP    +  Y CGPTVYD AH+G+AR     D++ R+L+ Y+ +  V +V NI
Sbjct: 3  ITPFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKDYF-KFDVEFVMNI 61

Query: 73 TDIDDKIIERARQEHPSIPINDAISII 99
          TD+DDKII R  Q+H       +   +
Sbjct: 62 TDVDDKIIVRGWQQHLFSEFLSSHPDV 88



 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 37/98 (37%), Gaps = 1/98 (1%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +     D+    +++ R         +  + +T K  + F++D   L  L P    R T 
Sbjct: 192 FYEATQDVILPYLDQLRGSTVPGDAYEIFTKLTKKYEEHFMRDMRDLNVLDPDEITRVTE 251

Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGS 164
           +  ++   ++ I+ +   Y   +  + FD  S    G 
Sbjct: 252 YGQEIADFVEKIVTNDFGYVTLDGSVYFDIKSFEKAGH 289


>gi|261884942|ref|ZP_06008981.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
           str. Azul-94]
          Length = 137

 Score = 97.2 bits (241), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 17/133 (12%)

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
           +TS +       +L A+ +DLN   A+  L ++   +    D           L+     
Sbjct: 5   KTSKTDAKFKKDILDAMSDDLNISVALAILDEMVNNANAKLDNEPKNRDFKQILVSNLEF 64

Query: 388 SAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
              +LGI    E       ++ ++   I  L+ +R +  K K F  AD IR +L +    
Sbjct: 65  VKELLGILYIDEFKWFQWGVDDSLKQEISVLIDQRNMAKKDKNFILADQIRDKLTNMDIS 124

Query: 442 LEDYKNPDNGQRM 454
           + D  N    +++
Sbjct: 125 IMDTPNGTMWEKV 137


>gi|289679398|ref|ZP_06500288.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 126

 Score = 96.5 bits (239), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 23/125 (18%)

Query: 332 ILLSKWPQTSTSKGIIDPA--------VLSALYNDLNTVSAIQALHKLARESTKNHD--- 380
             L ++        + +PA          +A+ +D  T  A   L ++ RE  +  +   
Sbjct: 1   AALERFYHALKGLPVAEPAGGEAFVERFSTAMNDDFGTPEACAVLFEMVREINRLRESDI 60

Query: 381 -----LLPIFNASAHILGI------EVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSA 428
                L       A +LG+      +  +      +    +E L+Q RL     K ++ +
Sbjct: 61  AAAAGLAARLKQLASVLGVLQLEADDFLRAGAEGRVDAAEVEALIQARLAARAAKDWAES 120

Query: 429 DYIRK 433
           D IR 
Sbjct: 121 DRIRD 125


>gi|145630617|ref|ZP_01786396.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983743|gb|EDJ91193.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 98

 Score = 93.0 bits (230), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 12/93 (12%)

Query: 374 ESTKNHDLLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
           ++ K + L         ILG+      +  +   + +    IE L+++R      K +++
Sbjct: 12  DAEKANGLAARLRELGAILGLLQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWAT 71

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           AD  R +L + G +LED      G   T W+++
Sbjct: 72  ADAARNELTAMGIVLED------GPNGTTWRKQ 98


>gi|270641735|ref|ZP_06222128.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270317337|gb|EFA28877.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 91

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 12/93 (12%)

Query: 374 ESTKNHDLLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
           ++ K + L         ILG+      +  +   + +    IE L+++R      K +++
Sbjct: 5   DAEKANGLAARLRELGAILGLLQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWAT 64

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           AD  R +L + G +LED      G   T W+++
Sbjct: 65  ADAARNELTAMGIVLED------GANGTTWRKQ 91


>gi|156053840|ref|XP_001592846.1| hypothetical protein SS1G_05768 [Sclerotinia sclerotiorum 1980]
 gi|154703548|gb|EDO03287.1| hypothetical protein SS1G_05768 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 404

 Score = 91.5 bits (226), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 52/139 (37%), Gaps = 12/139 (8%)

Query: 34  TVYD---FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
           TV D    AHIG AR  +        L+     K         DI    ++       + 
Sbjct: 74  TVADVLLRAHIGTARLAV------EALQA--PGKLPELFAKTEDILLPYLDALHGAKMNS 125

Query: 91  PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-N 149
                   +T K   +F +D   L  LAP H  R T ++PQ++  I+ I+ +G  Y   +
Sbjct: 126 NNYKIYLELTQKFEHRFFEDMNALNVLAPDHITRVTEYVPQIVPFIEKIVANGFGYATPD 185

Query: 150 NEIIFDTSSIPNYGSFSRR 168
             + FD  S    G    R
Sbjct: 186 GSVYFDIDSFEKAGHSYSR 204


>gi|33322800|gb|AAQ07135.1|AF496446_1 cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
          Length = 44

 Score = 88.0 bits (217), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/43 (67%), Positives = 33/43 (76%)

Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
            E  W+SPWG+GRPGWHIEC+ MS+ YLG   DIHGGG DL F
Sbjct: 2   DEIAWDSPWGKGRPGWHIECAVMSTKYLGDTLDIHGGGQDLEF 44


>gi|328478469|gb|EGF48191.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 110

 Score = 87.6 bits (216), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 20/116 (17%)

Query: 355 LYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNK 403
           + +D+N  + +  L  LA+   +            +DLL  ++A   I G+     +   
Sbjct: 1   MDDDVNVQNGLTVLFDLAKCLNEYANEDTVKQESVNDLLNQYDAWLQIFGVVFTDPN--- 57

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           N+   I+ LV+ R      K F+ +D IR QL ++G ILED        + TRW++
Sbjct: 58  NLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDT------PQGTRWRR 107


>gi|218458260|ref|ZP_03498351.1| cysteinyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 90

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 46/70 (65%)

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +LG+   K  +++ ++ A++ LV  RL +LK K F+ AD IR +L +KG  L+D K+P  
Sbjct: 20  LLGVLPKKAEIDEAVAAAVDALVAMRLEMLKAKNFAEADNIRDELTAKGIQLKDGKDPVT 79

Query: 451 GQRMTRWKQK 460
           G+R+T W+ K
Sbjct: 80  GERVTTWEVK 89


>gi|294637577|ref|ZP_06715860.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291089283|gb|EFE21844.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 88

 Score = 84.9 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 14/83 (16%)

Query: 386 NASAHILGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
              A +LG+               +   +  IE L+++R      K ++ AD  R QL +
Sbjct: 12  RRLAGVLGLLEQDPDAFLQSGASADDGEAAQIEALIKQRNDARAAKDWARADDARDQLNA 71

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
            G +LED      G + T W++K
Sbjct: 72  LGIVLED------GPQGTTWRRK 88


>gi|269861594|ref|XP_002650497.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|220066039|gb|EED43556.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 86

 Score = 84.9 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 13/88 (14%)

Query: 378 NHDLLPIFNASAHILGI------EVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADY 430
              L       A +LG+      E  +      +    ++ L+Q RL     K ++ +D 
Sbjct: 2   AAGLAARLKELASVLGVLQMEADEFLQAGAEGRVDAAEVDALIQARLAARTNKDWAESDR 61

Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
           IR QL + G +LED K        T W+
Sbjct: 62  IRDQLTAMGVVLEDGK------GGTTWR 83


>gi|323209911|gb|EFZ94825.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 115

 Score = 84.9 bits (209), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 22/121 (18%)

Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK--------E 399
            +D NT  A   L  +ARE  +         + +       + +LG+   +         
Sbjct: 1   NDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGA 60

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
             +      IE L+Q+RL   K K +++AD  R +L   G ILED      G + T W++
Sbjct: 61  QADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILED------GPQGTTWRR 114

Query: 460 K 460
           K
Sbjct: 115 K 115


>gi|207109337|ref|ZP_03243499.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 65

 Score = 83.8 bits (206), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/62 (56%), Positives = 41/62 (66%), Gaps = 2/62 (3%)

Query: 31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
          CGPTVYD AH+G+AR  I FD+L R L     E  V  VRN TDIDDKII +A +E+ SI
Sbjct: 2  CGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSI 59

Query: 91 PI 92
            
Sbjct: 60 QE 61


>gi|50950043|emb|CAH10378.1| hypothetical protein [Homo sapiens]
          Length = 139

 Score = 81.4 bits (200), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 31/133 (23%)

Query: 268 NGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +G L+ +G   KMSKS  N+ITI + L+T       +   V R   L + YR  ID++  
Sbjct: 1   SGHLHAKGKEEKMSKSLKNYITIKDFLKT-------FSPDVFRFFCLRSSYRSAIDYSDS 53

Query: 326 RLTEAEILL----------SKWPQTSTSKGIIDP------------AVLSALYNDLNTVS 363
            + +A+ LL            + +   + G +              AV +AL +D +T  
Sbjct: 54  AMLQAQQLLLGPGSFLEDARAYMKGQLACGSVREAMLWERLSSTKRAVKAALADDFDTPR 113

Query: 364 AIQALHKLAREST 376
            + A+  LA    
Sbjct: 114 VVDAILGLAHHGN 126


>gi|153840519|ref|ZP_01993186.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149745817|gb|EDM56947.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 77

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 13/83 (15%)

Query: 385 FNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
               A ++GI              N +    IE L++ R      K +++AD  R +L  
Sbjct: 1   MRELADVIGILYQDPEAFLKGNAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTE 60

Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
            G +LED      G   T W++K
Sbjct: 61  MGIVLED------GPEGTTWRRK 77


>gi|303240347|ref|ZP_07326865.1| Cysteinyl-tRNA synthetase class Ia DALR [Acetivibrio cellulolyticus
           CD2]
 gi|302592074|gb|EFL61804.1| Cysteinyl-tRNA synthetase class Ia DALR [Acetivibrio cellulolyticus
           CD2]
          Length = 264

 Score = 79.9 bits (196), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 83/233 (35%), Gaps = 60/233 (25%)

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
           ++ +K S S GN +   ELL         +   V++L++L+   +   + T  +   +E 
Sbjct: 33  VDLQKESASLGNILESKELLS-------KYHPEVLKLSILLNKSQGLKELTDAQFIASEK 85

Query: 333 LLSKWPQTSTS--------------------------KGIIDPAVLSALYNDLNTVSAIQ 366
            L  + QT  +                             I  + ++AL ++ NT  AI 
Sbjct: 86  RLYYFYQTLNNIKKFANDNSQLNEIIAPHGKIIKPDVVKGIKVSFVAALNDNFNTSLAIS 145

Query: 367 A-------------------------LHKLARESTKNHDLLPIFNASAHI--LGIEVCKE 399
                                     L+K+ ++     +LL I      +  LGI+    
Sbjct: 146 DFLQVFKYSNALLNNANENPLHKLTTLNKICKDILTTANLLGILLEDPEVFILGIKEKYI 205

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
            L       + +L++ R     +K +  AD ++ +L+ KG I++D +      
Sbjct: 206 KLRSIDMKEVAELIKTRQEAKSLKNYKLADELKAKLDQKGIIVQDSQFGSGWD 258


>gi|194238572|ref|XP_001914746.1| PREDICTED: similar to cysteinyl-tRNA synthetase [Equus caballus]
          Length = 95

 Score = 79.5 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 34/74 (45%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              L  L P    R + ++P+++  +Q I+ +G+ Y +N  + FDT    +    S  K+
Sbjct: 1   MEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTVKFASSEKHSYGKL 60

Query: 171 DEQKMGTRVPEKYH 184
             + +G +   +  
Sbjct: 61  VPEAVGDQRALQEG 74


>gi|110740110|dbj|BAF01956.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 140

 Score = 79.5 bits (195), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 21/131 (16%)

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGI----- 394
           S  ++ P  L+A+   L T++ +    K  +++ +   L  +         ILG+     
Sbjct: 1   SDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALETTIRDVLTILGLMPTSY 60

Query: 395 ----EVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
               E  KE   K        + + VQER    K K++  +D IRK L   G  L D   
Sbjct: 61  SEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDS-- 118

Query: 448 PDNGQRMTRWK 458
                  T W+
Sbjct: 119 ----PEGTTWR 125


>gi|167578524|ref|ZP_02371398.1| Cysteine--tRNA ligase [Burkholderia thailandensis TXDOH]
          Length = 148

 Score = 77.2 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--LGIEVCKEHLNKNISIAIEKL 412
           +  DLN   A+  L +L   S     L    +    +  LG+   K  +  +I  ++  L
Sbjct: 1   MNEDLNLPRALAVLRELVESSLPPSTLRATVDGFDTVPSLGLRDWKPVM-FDIPESVRAL 59

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           + ER      + ++ AD IR+ L ++G+ +E  K   
Sbjct: 60  LGEREQDRAERNWAKADDIRRTLSARGWRVEGSKEGQ 96


>gi|167616666|ref|ZP_02385297.1| Cysteine--tRNA ligase [Burkholderia thailandensis Bt4]
 gi|257143161|ref|ZP_05591423.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 148

 Score = 77.2 bits (189), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--LGIEVCKEHLNKNISIAIEKL 412
           +  DLN   A+  L +L + S     L    +    +  LG+   +  +  +I  ++  L
Sbjct: 1   MNEDLNLPRALAVLRELVKSSLPPSTLRATVDGFDTVPSLGLRDWQPVM-FDIPESVRAL 59

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           + ER        ++ AD IR+ L ++G+ +E  K   
Sbjct: 60  LGEREQDRAEGNWAKADDIRRTLSARGWRVEGSKEGQ 96


>gi|302666064|ref|XP_003024635.1| hypothetical protein TRV_01204 [Trichophyton verrucosum HKI 0517]
 gi|291188700|gb|EFE44024.1| hypothetical protein TRV_01204 [Trichophyton verrucosum HKI 0517]
          Length = 282

 Score = 76.4 bits (187), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFD 155
             +T     +F++D   L  L P    R  ++IP++I  I+ II +G AY  ++  I F+
Sbjct: 89  RTLTRNFETRFLEDMRCLNVLDPDELTRVASYIPEIIQFIEKIIDNGFAYSTSDGSIYFN 148

Query: 156 TSSIP 160
                
Sbjct: 149 IDKFK 153


>gi|238490458|ref|XP_002376466.1| hypothetical protein AFLA_105950 [Aspergillus flavus NRRL3357]
 gi|220696879|gb|EED53220.1| hypothetical protein AFLA_105950 [Aspergillus flavus NRRL3357]
          Length = 238

 Score = 75.7 bits (185), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 1/98 (1%)

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +     D+    +++ R         +  + +T K  + F++D   L  L P    R T 
Sbjct: 134 FYEATQDVILPYLDQLRGSTVPGDAYEIFTKLTKKYEEHFMRDMRDLNVLDPDEITRVTE 193

Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGS 164
           +  ++   ++ I+ +   Y   +  + FD       G 
Sbjct: 194 YGQEIADFVEKIVANDFGYVTLDGSVYFDIKCFEKAGH 231


>gi|94270264|ref|ZP_01291692.1| probable cysteinyl-tRNA synthetase [delta proteobacterium MLMS-1]
 gi|93450874|gb|EAT01891.1| probable cysteinyl-tRNA synthetase [delta proteobacterium MLMS-1]
          Length = 116

 Score = 74.5 bits (182), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 18/100 (18%)

Query: 373 RESTKNHDLLPIFNASAHILGIEVC---------KEHLNKNISI---AIEKLVQERLILL 420
           R+     D          I G+            +E L   + I    IEKL+ +R    
Sbjct: 16  RDLELLRDSAAKLRELGGIFGLLQEDPAAYLARRQERLLAGLDITPGEIEKLLAQRQTAR 75

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           +   ++ AD IR  L +K   ++D      G   T W+ +
Sbjct: 76  QNGDWAEADRIRDLLAAKKIAIKD------GPDGTSWEVQ 109


>gi|145629046|ref|ZP_01784845.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144978549|gb|EDJ88272.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 52

 Score = 73.7 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 6/52 (11%)

Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
           IE L+++R      K +++AD  R +L + G +LED      G   T W+++
Sbjct: 7   IEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWRKQ 52


>gi|154313001|ref|XP_001555827.1| hypothetical protein BC1G_05502 [Botryotinia fuckeliana B05.10]
 gi|150849587|gb|EDN24780.1| hypothetical protein BC1G_05502 [Botryotinia fuckeliana B05.10]
          Length = 315

 Score = 73.7 bits (180), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 34/75 (45%)

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
              L  + P    R T ++P++   ++ II  G AYE++  + FD ++    G+   R  
Sbjct: 1   MDALNVMRPDVITRVTTYVPKIAIFVKKIIDKGFAYESDGSVYFDIAAFEKAGNPYARLR 60

Query: 171 DEQKMGTRVPEKYHK 185
            E +    + E+  +
Sbjct: 61  PESRNEKALQEEGER 75


>gi|227537538|ref|ZP_03967587.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227242675|gb|EEI92690.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 96

 Score = 73.7 bits (180), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 5/86 (5%)

Query: 374 ESTKNHDLLPIFNASA-----HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
           ++T N   L    A        ILG+         N+   +  ++  R    + K F+++
Sbjct: 11  KATINQKGLDELKAFMKDFVEDILGLNDDSNAGTDNMDELMNVIINIRNSAKQNKDFATS 70

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRM 454
           D IR++L S G  L+D K+     ++
Sbjct: 71  DRIREELSSIGIQLKDSKDGTLWNKI 96


>gi|298492533|ref|YP_003722710.1| lysyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234451|gb|ADI65587.1| lysyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 527

 Score = 72.6 bits (177), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 68/355 (19%), Positives = 127/355 (35%), Gaps = 43/355 (12%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPSIP 91
           T     H+G+ R +++ DV+YR L++    K V ++  + D D  D + +   QE  +  
Sbjct: 22  TPSGRVHVGSLRGVVIHDVIYRALKH--ARKPVKFLYGVDDYDALDTVPKYLEQETFAPY 79

Query: 92  IN----------DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
           +           +  S        +F +    L     T+  R      ++   I   + 
Sbjct: 80  LGFPICNVPSPAEGASDYAKYFIGEFFEVFEYLGIKPETYFLRDLYRSGKLNSHIDTFLK 139

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN--------PADFIL 193
           + H      E+  + S      ++   ++  +  G          N          D   
Sbjct: 140 NAH---LVREVYKEVSKADRPNNWYPFQVVCENCGKIATTVTTDYNGSEVFYTCNPDATN 196

Query: 194 WKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           + +      GW SP+ G G+  W +E  A     +G    I   G D        ++A +
Sbjct: 197 YTKGC-GHSGWVSPFNGNGKLPWKVEWVA-KWDVVGVT--IEMAGKDHSQKGGSRDVANA 252

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                ++K         F+ + G KMS S G   +  E+           P  ++R  ML
Sbjct: 253 ISRKVLQKQPPFHSPYEFILVNGTKMSSSKGVGSSAKEIAAL-------LPPELLRFLML 305

Query: 313 MTHYREPIDF-----TVQRL-TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
            T  R  I+F     T+ RL  + + L++K+  +      + P   + L +D+ T
Sbjct: 306 RTQPRTVINFVPNYETITRLFRDYDTLINKYSNSPELTEELMPLFYAQLGDDIQT 360


>gi|67920768|ref|ZP_00514287.1| similar to Cysteinyl-tRNA synthetase [Crocosphaera watsonii WH
           8501]
 gi|67856885|gb|EAM52125.1| similar to Cysteinyl-tRNA synthetase [Crocosphaera watsonii WH
           8501]
          Length = 61

 Score = 71.8 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +++R    K K F+ +D IR QL+ +G IL D         +T W +
Sbjct: 19  IEQRKEARKNKNFAESDRIRDQLKEQGIILVDQPGG-----VTTWHR 60



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 3  KKIKIYNTLERKITEFQAIDPSN 25
            + +YNTL RK   F  I+   
Sbjct: 1  MTLTLYNTLTRKKEPFTTIEQRK 23


>gi|297694415|ref|XP_002824472.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Pongo abelii]
          Length = 288

 Score = 70.3 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 43/121 (35%), Gaps = 29/121 (23%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR----------- 326
           MSKS  N+ITI + L+T       +   V R   L + YR  ID++              
Sbjct: 1   MSKSLKNYITIKDFLKT-------FSPDVFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGL 53

Query: 327 ---LTEAEILLS--------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              L +A   +         +             AV +AL +D +T   + A+  LA   
Sbjct: 54  GSFLEDARAYMKGQLACGSVREAMLWERLSSTKRAVKAALADDFDTPRVVDAILGLAHHG 113

Query: 376 T 376
            
Sbjct: 114 N 114


>gi|118380222|ref|XP_001023275.1| hypothetical protein TTHERM_00444130 [Tetrahymena thermophila]
 gi|89305042|gb|EAS03030.1| hypothetical protein TTHERM_00444130 [Tetrahymena thermophila
           SB210]
          Length = 833

 Score = 70.3 bits (171), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN-GQ 452
           I +     +K     I  L+++R    K   F  AD IR  L++ G  L D K     GQ
Sbjct: 707 IHLQNPSNSKMSEKQIISLIEQRNKARKESNFQEADRIRNFLKNNGIALMDEKGGRGKGQ 766

Query: 453 RMTRWK 458
            +T WK
Sbjct: 767 DVTTWK 772


>gi|282901323|ref|ZP_06309249.1| hypothetical protein CRC_02722 [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193818|gb|EFA68789.1| hypothetical protein CRC_02722 [Cylindrospermopsis raciborskii
           CS-505]
          Length = 520

 Score = 70.3 bits (171), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 64/343 (18%), Positives = 113/343 (32%), Gaps = 39/343 (11%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN 93
           T     H+G+ R +++ DV+YR L++       TY  +  D  D + +   +E     + 
Sbjct: 22  TPSGRVHVGSLRGVVIHDVIYRALKHAGKPVKFTYGVDDYDALDTVPKYLDREKFKSYLG 81

Query: 94  ----------DAISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNII 140
                     +           +F +    L     T+  R    +  +   I +    +
Sbjct: 82  FPLCNVPSPGEGAPDYAKYFIGEFFEIFEYLGIQPETYFLRDLYRSGKLNSHINI---FL 138

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRSTP 199
            + H      ++    S      ++   ++  +  G               F   + ++ 
Sbjct: 139 KNAH---LVRQVYKQVSKADRPENWYPFQVICENCGKIATTVVTDYNGSEVFYTCQPNST 195

Query: 200 ------MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
                    GW SP  G G+  W +E  A     LG    I   G D        ++A +
Sbjct: 196 NYVQGCGHSGWVSPLNGNGKLPWKVEWVA-KWDVLGVT--IEMAGKDHSQKGGSRDVANA 252

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            C   +EK         F+ + G KMS S G   +  E+           P  ++R  ML
Sbjct: 253 ICRQVLEKQPPFHSPYEFILVNGTKMSSSKGVGSSAREI-------ANLLPPELLRFLML 305

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
            T  R  I+F      E    L +   T  SK  ++P +   L
Sbjct: 306 RTQPRTVINFAPN--YETITRLFRDYDTLISKYEVNPELTEEL 346


>gi|58698689|ref|ZP_00373579.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534801|gb|EAL58910.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 78

 Score = 69.1 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 8/80 (10%)

Query: 381 LLPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           L   F  SA  +G+      +          IE+L+  R    + K +++AD IR QL+ 
Sbjct: 4   LTESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLKQ 63

Query: 438 KGFILEDYKNPDNGQRMTRW 457
            G  + D ++       T W
Sbjct: 64  IGVTISDNEDGT-----TTW 78


>gi|166365419|ref|YP_001657692.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166087792|dbj|BAG02500.1| lysyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 535

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 117/359 (32%), Gaps = 54/359 (15%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPSIP 91
           T     H+G+ R +++ DV+ R L++  G K   ++  + D D  D +     +E  +  
Sbjct: 22  TPSGRVHVGSLRGVVIHDVIDRALKH--GGKSSKFLYGVDDYDALDTVPHYLDREKFAPY 79

Query: 92  IN----------DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
           +           ++ S        +F++    L      +  R      ++   I   + 
Sbjct: 80  LGFPLCNVPSPDNSASDYAKYFMGEFLEVFEHLGVRPEVYYLRDLYRSGRLNSYIDTFLK 139

Query: 142 HGH----AY------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
           + H    AY         +       +  N G  +   + +            K +  D+
Sbjct: 140 NAHLVREAYLEVSKARRPDNWYPFQIACENCGKIATTVVSD--YNGSEVFYTCKPDATDW 197

Query: 192 ILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           +          GW SP+ G G+  W +E  A     LG    I   G D        ++A
Sbjct: 198 V----QGCGHSGWVSPFNGNGKLPWKVEWVA-KWDLLG--ITIELAGKDHSQKGGSRDVA 250

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            + C   + K         F+ + G KMS S G   +  E+ E         P  ++R  
Sbjct: 251 NAICRKVLRKQPPFHSPYEFILVNGTKMSSSKGVGSSAKEIAEL-------LPPELLRFL 303

Query: 311 MLMTHYREPIDFTV------------QRLTEAEILLSK-WPQTSTSKGIIDPAVLSALY 356
           ML T  +  I+F                L +    LS    Q S     + P   S L 
Sbjct: 304 MLRTQPKTVINFAPNYETTTRLFRDYDSLADKYQALSADAQQESALPEELMPLFYSQLD 362


>gi|159029925|emb|CAO90304.1| lysS [Microcystis aeruginosa PCC 7806]
          Length = 534

 Score = 68.3 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 67/359 (18%), Positives = 117/359 (32%), Gaps = 54/359 (15%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPSIP 91
           T     H+G+ R +++ DV+ R L++  G K   ++  + D D  D +     +E  +  
Sbjct: 22  TPSGRVHVGSLRGVVIHDVIDRALKH--GGKSSKFLYGVDDYDALDTVPHYLDREKFAPY 79

Query: 92  IN----------DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
           +           ++ S        +F++    L      +  R      ++   I   + 
Sbjct: 80  LGFPLCNVPSPDNSASDYAKYFMGEFLEVFEHLGVRPEVYYLRDLYRSGRLNSYIDTFLK 139

Query: 142 HGH----AY------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
           + H    AY         +       +  N G  +   + +            K +  D+
Sbjct: 140 NAHLVREAYLEVSKARRPDNWYPFQIACENCGKIATTVVSD--YNGSEVFYTCKPDATDW 197

Query: 192 ILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
           +          GW SP+ G G+  W +E  A     LG    I   G D        ++A
Sbjct: 198 V----QGCGHSGWVSPFNGNGKLPWKVEWVA-KWDLLG--ITIELAGKDHSQKGGSRDVA 250

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            + C   + K         F+ + G KMS S G   +  E+ E         P  ++R  
Sbjct: 251 NAICRKVLRKQPPFHSPYEFILVNGTKMSSSKGVGSSAKEIAEL-------LPPELLRFL 303

Query: 311 MLMTHYREPIDFTV------------QRLTEAEILLSK-WPQTSTSKGIIDPAVLSALY 356
           ML T  +  I+F                L +    LS    Q S     + P   S L 
Sbjct: 304 MLRTQPKTVINFAPNYETTTRLFRDYDSLADKYQALSADAQQESALPEELMPLFYSQLD 362


>gi|325067261|ref|ZP_08125934.1| cysteinyl-tRNA synthetase [Actinomyces oris K20]
          Length = 113

 Score = 68.0 bits (165), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 31/87 (35%), Gaps = 16/87 (18%)

Query: 381 LLPIFNASAHILGIEVCKEHLNKNI---------SIAIEKL-------VQERLILLKMKK 424
           L     +   +LG++   E     +           A+E L       + ER      K 
Sbjct: 24  LALDLRSQLDVLGLDPLAEPWRARVLDGAGSSQGGAAMEALDRLIRHDLDERAQARAAKD 83

Query: 425 FSSADYIRKQLESKGFILEDYKNPDNG 451
           ++ AD +R +L   G ++ED  +    
Sbjct: 84  WARADALRDKLTGAGVVVEDSPSGARW 110


>gi|296270992|ref|YP_003653624.1| cysteinyl-tRNA synthetase-like protein [Thermobispora bispora DSM
           43833]
 gi|296093779|gb|ADG89731.1| Cysteinyl-tRNA synthetase-like protein [Thermobispora bispora DSM
           43833]
          Length = 237

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 10/119 (8%)

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---- 346
           +    +          +RLA+L   +R P+D T + L +A   L++W +           
Sbjct: 115 IASPAELTAAGLDPLAVRLALLAHGHRPPVDLTDEALRDAAAELARWRRRVAEWAESPSH 174

Query: 347 -IDPAVLS----ALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHILGIEVCKE 399
            ID         AL +DL+T +A++ L +L   ES         F     +LG+++  E
Sbjct: 175 PIDQGHAERIQRALDDDLDTAAALRLLRELEHDESVPPGSRFETFIHFDRVLGLDLPAE 233


>gi|284046700|ref|YP_003397040.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283950921|gb|ADB53665.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 501

 Score = 67.6 bits (164), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 63/335 (18%), Positives = 106/335 (31%), Gaps = 80/335 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DVL R +R    +    +    TD   + +  A        +  
Sbjct: 12  VNAQPHLGHAYTTIAADVLARHMRQRGED---VFFLTGTDEHGEPVALAAD-----RLGL 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
           A   +  +N  +F +   RL         R ++  H+ ++  ++Q I  +GH Y      
Sbjct: 64  APKELADRNAARFEEMMPRLNVSN-DFFIRTSDPRHVKKVQEVMQRIHDNGHTYLGTYEG 122

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGT--RVPEKYHKKNPADFILWKRSTPME------P 202
                 +           +I E        +P    K+    F L     P+E      P
Sbjct: 123 WFCPRCADFKG-----ENEIAEGNTCPIHHIPLDREKEENWFFRLSTFQEPLERLYAEQP 177

Query: 203 GWESP-------------------WGRGRPGWHIECSAMSSHYLGKVFD----------- 232
            W +P                     RG+  W +  +   SH     FD           
Sbjct: 178 DWAAPPTRRNEALAFIRSGLRDVSLSRGKFTWGVPVTWDPSHVFYVWFDALLNYYTALSF 237

Query: 233 ---------------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
                          +H  G D++  H     A    AD         + +G+L ++G K
Sbjct: 238 AREGEDLTERFWPADLHVIGKDILKFHAVYWPAMLMAADL--PLPRREMIHGYLLMDGEK 295

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           MSKS GN +   E+++        +    +R   L
Sbjct: 296 MSKSLGNVLDPFEVIDR-------FGTDALRYYCL 323


>gi|297789694|ref|XP_002862786.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297308510|gb|EFH39044.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 77

 Score = 67.2 bits (163), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 394 IEVCKEHLNKNISIAIE---KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           +E  KE   K   +  E   + VQER    K K++  +D IRK L S G  L D      
Sbjct: 2   LEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDAIRKDLASVGIALMDS----- 56

Query: 451 GQRMTRWK 458
               T W+
Sbjct: 57  -PEGTTWR 63


>gi|213025899|ref|ZP_03340346.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 52

 Score = 66.8 bits (162), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 8/59 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S CA   E   N W+H+G + ++  KMSKS GNF T+ ++L       + + A  +R  
Sbjct: 2   STCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYF 52


>gi|167042815|gb|ABZ07533.1| putative tRNA binding domain protein [uncultured marine
           microorganism HF4000_ANIW137I15]
          Length = 665

 Score = 66.8 bits (162), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 70/351 (19%), Positives = 112/351 (31%), Gaps = 81/351 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D+ HIG+A   I  DVL R  R         ++   TD   + +ERA  +    P   
Sbjct: 14  VNDYPHIGHAYTTIAADVLARFHRLAG---TRVFLLTGTDEHGQKVERAALDRGLTPQG- 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +   ++ +   RL    P    R T   H   +  L + +   G  Y    E 
Sbjct: 70  ----LADRVVGRYHQLWDRLRIE-PDDFIRTTEARHRKGVEDLFRRVQEKGDIYLGEYEG 124

Query: 153 IFDTS-------------SIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFILW 194
            + T                P  G    R  +E              ++ +++P  FIL 
Sbjct: 125 WYCTPDESFWTETQVVDGKCPECGRPVERVREESYFFRMSKYQDRLLRHLEEHPG-FIL- 182

Query: 195 KRSTPMEP--------------GWESPWGRGRPG--------WHIECSAMSSHY-LG--- 228
             S   E                    WG   PG        W    +   S    G   
Sbjct: 183 PESRRNEVIRFVEGGLRDLSISRTTFQWGIPVPGGQGHVLYVWFDALTNYISALGFGEKN 242

Query: 229 -----KVF---DIHGGGLDLIFPHHEN---EIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
                + F   D+H  G D++  H       +  +         A+ W       +EG+K
Sbjct: 243 GGEGYETFWPADVHLIGKDILRFHAVYWPTFLMSAELPLPRRVFAHGWW-----TVEGQK 297

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           MSKS  N +  N LL+        + A  +R  +L    + +  +F+ + L
Sbjct: 298 MSKSLRNVVEPNRLLDR-------YGADAVRYFLLREVPFGQDGNFSHEAL 341


>gi|306836883|ref|ZP_07469839.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
 gi|304567255|gb|EFM42864.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
          Length = 64

 Score = 65.6 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%)

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
            +  +   ++  ++ R      K F++AD +R +L + G  + D  +    
Sbjct: 9   ADAALDALVQAELERRTQARAEKDFATADAVRDRLTAAGITITDTPDGPTW 59


>gi|326428292|gb|EGD73862.1| hypothetical protein PTSG_05557 [Salpingoeca sp. ATCC 50818]
          Length = 469

 Score = 64.9 bits (157), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 69/194 (35%), Gaps = 50/194 (25%)

Query: 45  RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
           R +I  D   R+L+  +G   +  +     +DD  ++                       
Sbjct: 71  RTLISADTTRRVLQSSFGFNVLFALC----VDDLGVDA---------------ETARAFE 111

Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
           ++ VK       L P+   RA+++I +    +  ++ + HAYEA+ EI+  + + P    
Sbjct: 112 EELVKALKAANILPPSLMLRASDYIEEAKTTMDTLLKNAHAYEADGEIMLGSDTNP---- 167

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
                                       LW + +     +++ WG+GRP       A+++
Sbjct: 168 ---------------------------ALWVKGSGDAQTFDASWGKGRPTATGIAMALTA 200

Query: 225 HYLGKVFDIHGGGL 238
             L    DI  GG 
Sbjct: 201 GALDAPLDIVFGGE 214


>gi|330508605|ref|YP_004385033.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328929413|gb|AEB69215.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 668

 Score = 63.7 bits (154), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 64/383 (16%), Positives = 110/383 (28%), Gaps = 110/383 (28%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      H+G+ R  +  D+  R LR     K V +V         I+  A  +  
Sbjct: 6   TCGLPYANGPCHLGHLRTYVPADIFVRGLRKMG--KEVLFVCGSDSHGTPIVVNAEAQ-- 61

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLAC----LAPTHQPRATNHIPQMIYLIQNIILHGH 144
                     ++ K  Q F +    +         T  P   N   +M   ++ ++ +G+
Sbjct: 62  ----GMTPKALSIKYHQHFDEIFQGMEIDFDFFGDTDDPACHNRTKEM---VEALMENGY 114

Query: 145 AYEANNEIIFD-----------TSSIPNY-GSFSRRKIDEQKMGTRVPEKYHKK------ 186
            Y    ++ +                  Y G  +R    +   G  +     K       
Sbjct: 115 VYPREIDLAYCPKCERFLPDRYVEGECPYCGKPARGDECDMGCGRHLEPGEIKNAICKVC 174

Query: 187 -----------------NPADFIL------------------WKRSTPMEPGW----ESP 207
                               DF+L                  W RS   +  W       
Sbjct: 175 GGRAEYRKQTHYFFRLSGFRDFLLEHLQTLGGTASARNYATEWVRSELKD--WCITRNMA 232

Query: 208 WGRGRPG--------W---------HIE--CSAMSSHY-----LGKVFDIHGGGLDLIFP 243
           WG   PG        W           E  C+     +           IH  G D+++ 
Sbjct: 233 WGVRFPGSDDLVVYVWVDAPIGYIAFTEEWCARSGRDWEDYWKKPSQI-IHFIGGDIVYH 291

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           H     A    A     +A   + +G L ++ +K SKS GN I + +      +  R   
Sbjct: 292 HCIFWPAMLKGAGYTLPSAV--VASGMLKIDDKKFSKSRGNVIWVKD-----DYMDRGLH 344

Query: 304 APVIRLAMLM--THYREPIDFTV 324
             ++R  +     H  + ++F  
Sbjct: 345 PDLLRYYLASYTAH-NKEVNFAW 366


>gi|168998631|ref|YP_001687899.1| hypothetical protein pK2044_00345 [Klebsiella pneumoniae
           NTUH-K2044]
          Length = 90

 Score = 63.0 bits (152), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 14/90 (15%)

Query: 377 KNHDLLPIFNASAHILGI-EVCKEHLNKNISIA-------IEKLVQERLILLKMKKFSSA 428
           +   L        ++LG+ E   +   KN S         IE+L+ +R    +M ++  A
Sbjct: 5   EAAALATTLKYLGNVLGLLEQSADAFLKNRSDLHPAELQLIERLIHQRSKARRMGEWDKA 64

Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           D +R +L  +G  LED          T W+
Sbjct: 65  DRLRNELAEQGIELEDV------GENTSWR 88


>gi|213857652|ref|ZP_03384623.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 53

 Score = 62.6 bits (151), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 18/43 (41%)

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
            A  +R  ++  HYR  ++++ + L +A   L +         
Sbjct: 1   DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTD 43


>gi|197119575|ref|YP_002140002.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197088935|gb|ACH40206.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 509

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 82/432 (18%), Positives = 136/432 (31%), Gaps = 109/432 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +        +T  D+      + E  +I   +
Sbjct: 14  VNDVPHIGHAYTTLAADVLARYKRLKGFDVFF-----LTGTDEH---GQKVEKAAIAAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  ++F     +L     T   R T   H   +  L + ++  G  Y    E 
Sbjct: 66  TPLELADRVMKRFQSLWEKLEISN-TDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYED 124

Query: 153 IFDT--------SSIPNY-GSFSRRKIDEQKMGT--------RVPEKYHKKNPADFILWK 195
            + T        + + +Y      R  ++ K  +        +     H +   DFI  K
Sbjct: 125 WYCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEANPDFIQPK 184

Query: 196 RSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSSHY-------- 226
                   +                WG   PG        W    +   +          
Sbjct: 185 SRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYPDEQGN 244

Query: 227 LGKVF--DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            GK +  D+H  G D L F  H         A  +     ++ H G+  +EG+KMSKS  
Sbjct: 245 FGKYWPCDVHLIGKDILRF--HTVYWPTFLMAAGLPIPKKVFAH-GWWTVEGQKMSKSLQ 301

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQR------------ 326
           N +  N L++        +    +R  +L    RE       DF+ Q             
Sbjct: 302 NVVEPNMLVD-------KYGVDAVRYFLL----REVPFGLDGDFSHQALVHRINSDLAND 350

Query: 327 ----LTEAEILLSKWP----QTSTSKGIIDPAVLS---AL-------YNDLNTVSAIQAL 368
               L  +  +L K+     Q    +  +D A      A+         DL    A+QA+
Sbjct: 351 LGNLLNRSTAMLGKYFGGVLQAPGEETDLDAAYREKTAAMIGQVDGFIEDLAFSRALQAI 410

Query: 369 HKLARESTKNHD 380
            ++     K  D
Sbjct: 411 WEVISAGNKYID 422


>gi|18075759|emb|CAD11305.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 59

 Score = 62.2 bits (150), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 6/63 (9%)

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +  ++++    IEK ++ER    + K F  AD IR++L  +   L D        + T 
Sbjct: 1   FQLGVSESEKQEIEKKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------PQGTI 54

Query: 457 WKQ 459
           W++
Sbjct: 55  WEK 57


>gi|253699686|ref|YP_003020875.1| methionyl-tRNA synthetase [Geobacter sp. M21]
 gi|251774536|gb|ACT17117.1| methionyl-tRNA synthetase [Geobacter sp. M21]
          Length = 509

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 82/432 (18%), Positives = 136/432 (31%), Gaps = 109/432 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +        +T  D+      + E  +I   +
Sbjct: 14  VNDVPHIGHAYTTLAADVLARYKRLKGFDVFF-----LTGTDEH---GQKVEKAAIAAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  ++F     +L     T   R T   H   +  L + ++  G  Y    E 
Sbjct: 66  TPLELADRVMKRFQSLWEKLEISN-TDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYED 124

Query: 153 IFDT--------SSIPNY-GSFSRRKIDEQKMGT--------RVPEKYHKKNPADFILWK 195
            + T        + + +Y      R  ++ K  +        +     H +   DFI  K
Sbjct: 125 WYCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEANPDFIQPK 184

Query: 196 RSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSSHY-------- 226
                   +                WG   PG        W    +   +          
Sbjct: 185 SRRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYPDEAGN 244

Query: 227 LGKVF--DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            GK +  D+H  G D L F  H         A  +     ++ H G+  +EG+KMSKS  
Sbjct: 245 FGKYWPCDVHLIGKDILRF--HTVYWPTFLMAAGLPIPKKVFAH-GWWTVEGQKMSKSLQ 301

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQR------------ 326
           N +  N L++        +    +R  +L    RE       DF+ Q             
Sbjct: 302 NVVEPNMLVD-------KYGVDAVRYFLL----REVPFGLDGDFSHQALVHRINSDLAND 350

Query: 327 ----LTEAEILLSKWP----QTSTSKGIIDPAVLS---AL-------YNDLNTVSAIQAL 368
               L  +  +L K+     Q    +  +D A      A+         DL    A+QA+
Sbjct: 351 LGNLLNRSTAMLGKYFGGVLQAPGEETELDAAYREKTAAMIGQVDGFIEDLAFSRALQAV 410

Query: 369 HKLARESTKNHD 380
            ++     K  D
Sbjct: 411 WEVISAGNKYID 422


>gi|196234225|ref|ZP_03133056.1| lysyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
 gi|196221684|gb|EDY16223.1| lysyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
          Length = 607

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 56/346 (16%), Positives = 107/346 (30%), Gaps = 45/346 (13%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY-VRNITDIDDKIIERARQ------- 85
           T     H+G  R +++ D ++R LR    E    + V +   +D+    +          
Sbjct: 22  TPSGRVHVGALRGVLIHDAIFRTLREKGIEVKYLFGVDDYDPLDEIPAGKGEHFEKYLGQ 81

Query: 86  --EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNII 140
              +   P N   + +     Q+F +    L      ++ R    + H  Q I  I    
Sbjct: 82  PLCNVPPPDNSPATDMAEHYIQEFFEIFEELGVKVEKYRMRDVYQSGHFNQAIDTILQNA 141

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG--------TRVPEKYHKKNPADFI 192
                      +  + S+     ++   +   +  G             +   +   D +
Sbjct: 142 A------TVRRVYKEVSNSDRPETWYPFQAVCENCGRIGTTEVFAYDGREVSYRCRPDMV 195

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
            W R    E       G+G+  W +E  A    +L     I G G D        +++ +
Sbjct: 196 KWARGCGHEGRVSPFDGKGKLPWKLEWVA---KWLTFPVTIEGAGKDHSTKGGSRDVSAA 252

Query: 253 C--CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           C       E   N  +   F  + G KMS S G       + +         P  V+R  
Sbjct: 253 CLKAIFGKEPPLN--VPYEFFLVGGAKMSSSKGIGAAARNIADL-------LPPEVLRFL 303

Query: 311 MLMTHYREPIDFT--VQRLTEAEILLSKW--PQTSTSKGIIDPAVL 352
           M+ T    P++F    + + +      ++            D A +
Sbjct: 304 MIRTKPLSPVNFDVKEEGIVKLYNEFDRFLTRSVHEKNATPDEACV 349


>gi|495470|gb|AAA18866.1| cysteinyl tRNA synthetase [Helicobacter pylori]
          Length = 59

 Score = 61.4 bits (148), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +  ++++    IE  ++ER    + K F  AD IR++L  +   L D        + T 
Sbjct: 1   FQLGVSESEKQEIENKIEERKRAKEQKNFLKADSIREELLKQKIALMDT------PQGTI 54

Query: 457 WKQ 459
           W++
Sbjct: 55  WEK 57


>gi|77919292|ref|YP_357107.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|77545375|gb|ABA88937.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 511

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 78/444 (17%), Positives = 131/444 (29%), Gaps = 126/444 (28%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  D+L R  R    E        +T  D+      + E  +    +
Sbjct: 14  VNDVPHIGHAYTTVACDMLARYKRAQGQEVFF-----LTGTDEH---GQKVEKAAQAKGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  +++     +L     T   R +   H   +  L + +   G  Y    E 
Sbjct: 66  TPLELADRVVKRYQALWEKLNISH-TDFIRTSQERHKKGVCDLFEKLHATGDIYLGEYED 124

Query: 153 IFDTS-------------SIPNYGSFSRRKIDE----------QKMGTRVPEKYHKKNPA 189
            + T                P+ G  + +  +E           ++   + E      P 
Sbjct: 125 WYCTPCETFWTETQLMDGCCPDCGRPTDKLKEESYFFRMSKYQDQLLKHIEENPDFIQP- 183

Query: 190 DFILWKRSTPMEP--------------GWESPWGRGRPG--------WHIECSAMSSHYL 227
                 RS   E                    WG   PG        W    +   +  L
Sbjct: 184 ------RSRRNEILNFVREGLRDLSISRTSFSWGIPVPGNERHVIYVWFDALTNYITA-L 236

Query: 228 GKVFD------------IHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           G   D            +H  G D L F  H         A  +   A ++ H G+  +E
Sbjct: 237 GYPDDPEGHYKNFWPANVHIIGKDILRF--HTVYWPTFLLAAGLPLPAKVFAH-GWWTVE 293

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQRL-- 327
           G+KMSKS  N +  N L++        +    IR  +L    RE       DF+   L  
Sbjct: 294 GQKMSKSLQNVVEPNMLVD-------KYGVDAIRYFLL----REVPFGLDGDFSHAALVH 342

Query: 328 --------------TEAEILLSKWPQT----STSKGIIDPAVLSALY----------NDL 359
                         + +  +L+K+          +   D   ++A            +DL
Sbjct: 343 RINSDLANDLGNLVSRSTAMLNKYFGGILPEPKDRRPEDEPFIAAFADTVRKVDIFMDDL 402

Query: 360 NTVSAIQALHKLARESTKNHDLLP 383
               A+Q + +L     K  D   
Sbjct: 403 AFNKALQTIWELIGLGNKYIDDTA 426


>gi|163782331|ref|ZP_02177329.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882364|gb|EDP75870.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 493

 Score = 61.0 bits (147), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 61/347 (17%), Positives = 111/347 (31%), Gaps = 77/347 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D + R  R    +    +    TD     I+++ +E        
Sbjct: 13  VNDVPHIGHAYTTIAADTVARFYRLRGYD---VFFLTGTDEHGLKIQKSAEER-----GV 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYE--- 147
           +   +  +N++ F +    L     T   R T+  P+ + L++ +      +G  Y    
Sbjct: 65  SPKELADRNSENFKRLWEFLGIEY-TKFIRTTD--PEHVELVKEVFTKSYENGDIYLGEY 121

Query: 148 -----------------ANNEIIFDTSSIPNY-------GSFSRRKIDEQKMGTRVPE-- 181
                            A             Y          S+ +    ++    PE  
Sbjct: 122 EGWYCVGCEEFKSEMELAEGNSCPIHMKPCEYIREPSYFFRLSKYQDKLLELYEEHPEFV 181

Query: 182 ----------KYHKKNPADFILWKRSTPMEPGWESPWGRGRP--GWHIECSAMSSHYLGK 229
                      + K+   D  + +  + +  G   P+  G     W        S   G+
Sbjct: 182 RPDYRRNEIISFVKQGLKDLSVTRPRSRVRWGIPVPFDEGHTIYVWFDALFNYISALNGQ 241

Query: 230 -----VFDIHGGGLDLIFPHHENEIAQSCCADRIEK---TANIWIHNGFLNLEGRKMSKS 281
                  D+H  G D++  H     A              A+ W       +EG+KMSKS
Sbjct: 242 VDRYWPADLHIVGKDILRFHTVYWPAFLFSVGYEVPETVFAHGWW-----TVEGKKMSKS 296

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
            GN I+  E++E        +    +R  +L    + +  DF+ + +
Sbjct: 297 LGNVISPYEVVE-------EYGLDEVRYFLLREVPFGQDGDFSKEAI 336


>gi|18075765|emb|CAD11309.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|18075768|emb|CAD11311.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 54

 Score = 60.6 bits (146), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 6/58 (10%)

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +++    IE  ++ER    + K F  AD IR++L  +   L D        + T W++
Sbjct: 1   SESEKQEIESKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------PQGTIWEK 52


>gi|189425008|ref|YP_001952185.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421267|gb|ACD95665.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 508

 Score = 60.6 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 77/442 (17%), Positives = 132/442 (29%), Gaps = 107/442 (24%)

Query: 25  NIRMYVCGPT--VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P   V D  HIG+A   +  DVL R  R    +        +T  D+     
Sbjct: 2   KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRMKGFDVFF-----LTGSDEH---G 53

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
            + E  +    +    +  +  ++F     +L         R T   H   + ++ + ++
Sbjct: 54  QKVEKAAQTNGETPLELADRVVKRFQALWEKLGISHNDF-IRTTQERHKQGVTHIFKQLM 112

Query: 141 LHGHAYEAN-NEIIF------DTSSIPNYGSF--SRRKIDEQKMGT--------RVPEKY 183
             G  Y     +          T +    G      R +++ K  +              
Sbjct: 113 EQGDIYLGEYEDWYCTPCETFWTETQVEDGKCPDCNRPVEKLKEESYFFKMSAYGEKLLA 172

Query: 184 HKKNPADFILWKRSTPMEPGW-------------ESPWGRGRPG--------WHIECSAM 222
           H +   DFI  K        +                WG   PG        W    +  
Sbjct: 173 HIEANPDFIQPKTRRNEIISFVKEGLRDLSVSRTSFSWGIPVPGNERHVIYVWFDALTNY 232

Query: 223 SSHYLGKVF-----------DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
            S  LG              D H  G D L F  H         A  +     ++ H G+
Sbjct: 233 ISA-LGYPNADGNYGRYWPADAHLIGKDILRF--HTVYWPTFLMAAGLPIPQKVFAH-GW 288

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM----------THYREPI 320
             +EG+KMSKS  N +  N L++        +   V+R  +L           +H    I
Sbjct: 289 WTVEGQKMSKSLQNVVEPNMLID-------KYGVDVVRYFLLREVPFGLDGDFSH-GSLI 340

Query: 321 D-FTVQRLTEAEILLSK------------------WPQTSTSKGIIDPAVLSALY---ND 358
           +        +   LLS+                    +   +      A+L+A+    ++
Sbjct: 341 NRINSDLANDLGNLLSRSTAMLVKYFDGILPAPGPLSELDATLKTKAEAMLAAVDNCMDE 400

Query: 359 LNTVSAIQALHKLARESTKNHD 380
           L    A+Q++  +     K  D
Sbjct: 401 LAFSKALQSIWDVISAGNKYID 422


>gi|291278499|ref|YP_003495334.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290753201|dbj|BAI79578.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 640

 Score = 60.6 bits (146), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 62/335 (18%), Positives = 102/335 (30%), Gaps = 81/335 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +        +T  D+      + E  +     
Sbjct: 15  VNDVPHIGHAYTTVAADVLARYKRLCGYDVFF-----LTGTDEH---GQKIEQAAQKKGI 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +     ++F     +L         R T   H   +  + + +  +G  Y    E 
Sbjct: 67  TPKELADTVVERFKSLWVKLNISN-DKFIRTTDEEHKKTVQKIFKKMQENGDIYLGEYEG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK-KNPADFILWKRST---------PMEP 202
            + T        ++  ++ +         + HK K P+ F  +K S             P
Sbjct: 126 WYCTPCET---YWTETQLLDGNHCPSCGRETHKLKEPSYF--FKMSKYQNELLKYIQENP 180

Query: 203 GW--------------------------ESPWGRGRPG--------WHIECSAMSSH--Y 226
            +                             WG   PG        W    +   S   Y
Sbjct: 181 DFIQPTSRKNEIVSFIKEGLKDLSVSRVSFKWGIPVPGDENHVIYVWIDALTNYISAIGY 240

Query: 227 LGKV--F------DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           L +   F      D+H  G D L F  H         +  +     ++ H G+  +EG+K
Sbjct: 241 LDETKQFKKYWPADVHLVGKDILRF--HTVYWPTMLMSAGLPLPKKVFAH-GWWTVEGQK 297

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           MSKS GN I          +   ++    IR  +L
Sbjct: 298 MSKSLGNAI-------DPNWLVDTFGVDAIRYFLL 325


>gi|188997460|ref|YP_001931711.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932527|gb|ACD67157.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 628

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R    +   T+    TD         + +  +     
Sbjct: 14  VNDVPHLGHAYTTVAADVLARYYRQIGVK---TFFLTGTD-----EHGQKIQKTAEEKGI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
           +   +  K    F +   +L         R T  +HI  + ++ Q    +G  Y +  E 
Sbjct: 66  SPKELADKTHLAFKELWKKLNISY-DRFIRTTDPDHIKAVQHIFQKCYENGDIYLSEYES 124

Query: 153 IFDT 156
            +  
Sbjct: 125 YYCV 128


>gi|322420739|ref|YP_004199962.1| methionyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127126|gb|ADW14686.1| methionyl-tRNA synthetase [Geobacter sp. M18]
          Length = 509

 Score = 60.3 bits (145), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 80/432 (18%), Positives = 134/432 (31%), Gaps = 109/432 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +        +T  D+      + E  +    +
Sbjct: 14  VNDVPHIGHAYTTLAADVLARYKRLMGFDVFF-----LTGTDEH---GQKVEKAANAAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  ++F     +L     T   R T   H   +  L   ++  G  Y    E 
Sbjct: 66  TPLELADRVMKRFQSLWEKLEISH-TDFIRTTQERHKKGVSVLFDRVMAKGDIYLGEYED 124

Query: 153 IFDT--------SSIPNY-GSFSRRKIDEQKMGT--------RVPEKYHKKNPADFILWK 195
            + T        + + +Y      R  ++ K  +        +     H +   DFI  K
Sbjct: 125 WYCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEANPDFIQPK 184

Query: 196 RSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSSHY-------- 226
                   +                WG   PG        W    +   +          
Sbjct: 185 SRRNEIISFVKEGLRDLSVSRTTFEWGIPVPGNDKHVIYVWFDALTNYITALGYPDEEGN 244

Query: 227 LGKVF--DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
            GK +  D+H  G D L F  H         A  +     ++ H G+  +EG+KMSKS  
Sbjct: 245 FGKYWPCDVHLIGKDILRF--HTVYWPTFLMAAGLPIPKRVFAH-GWWTVEGQKMSKSLQ 301

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQR------------ 326
           N +  N L++        +    +R  +L    RE       DF+ Q             
Sbjct: 302 NVVEPNMLVD-------KYGVDAVRYFLL----REVPFGLDGDFSHQALIHRINSDLAND 350

Query: 327 ----LTEAEILLSKWP----QTSTSKGIIDPAVLS---AL-------YNDLNTVSAIQAL 368
               L  +  +L K+     Q    +  +D A      A+         D+    A+QA+
Sbjct: 351 LGNLLNRSTAMLGKYFGGELQAPGEESELDKAYREKTLAMIGQVDGFIEDMAFSRALQAI 410

Query: 369 HKLARESTKNHD 380
            ++     K  D
Sbjct: 411 WEVISAGNKYID 422


>gi|126179956|ref|YP_001047921.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|187647748|sp|A3CX39|SYM_METMJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|125862750|gb|ABN57939.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 664

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 59/177 (33%), Gaps = 24/177 (13%)

Query: 24  SNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               +  CG P      HIG+ R  +  D   R +R    E  V +V    +    I+  
Sbjct: 3   GKPLLVTCGLPYTNGPCHIGHLRTYVPADFYVRYMRRSGEE--VVFVCGSDNHGTPIVIS 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNII 140
           A QE           +++ +  + F +   R+  +         A NH      +++ +I
Sbjct: 61  AEQE------GSTPRVLSERYHEHFYETFRRMDVVFDRFGMTDDAMNH-ETTRSIVERLI 113

Query: 141 LHGHAYE--ANNEIIFDTSSI----------PNYGSFSRRKIDEQKMGTRVPEKYHK 185
            +G+ Y    +     D              P+ G+ +R    +Q  G  +     K
Sbjct: 114 ENGYVYAETVSQSYCPDCERFLPDRYVEGICPHCGAVARGDECDQGCGQHLEPGEIK 170



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 8/93 (8%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A     +A   + +G + +EG+K SKS G  +  N+   
Sbjct: 286 HFIGGDIIYHHCIFWPALLKGAGYGLPSAV--VASGMVTIEGKKFSKSRGYVVWTND--- 340

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQ 325
              +  +  PA  +R  +L  T++ + +DF+ +
Sbjct: 341 --DYLDQGLPADYLRYYLLSYTNHTKELDFSWK 371


>gi|294101616|ref|YP_003553474.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616596|gb|ADE56750.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 643

 Score = 59.9 bits (144), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 83/468 (17%), Positives = 134/468 (28%), Gaps = 121/468 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  DV+ R  R       V +     +   KI + A  +        
Sbjct: 15  VNDIPHIGHAYTTIAADVMARYRRMMG--DRVFFCTGTDEHGQKIQQSADAK------GM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  + F +    L         R T   H   +  + + ++  G  Y+   E 
Sbjct: 67  TAKELADRTMENFRRLWEVLNISNDDF-IRTTEERHEKVVQGIFKKLMDQGDIYKGTYEG 125

Query: 153 IFDTSSIPNYGSFSRRKIDE------------QKMGTRVPEKYHKKNPADF------ILW 194
            +       Y   S  K D+            ++         +     D+       + 
Sbjct: 126 WYCIP-CETYVPESSMKEDKTCPDCGRPLQKMEEESYFFRASKYSDQLLDYYEKNLKAIM 184

Query: 195 KRSTPMEP--------------GWESPWGRGRPG--------WH-------IECSAMSSH 225
            RS   E                    WG   PG        W          C  MS  
Sbjct: 185 PRSRYNEIVSFVRSGLRDQSVSRTSIKWGIPVPGDEKHVVYVWFDALINYLTACGYMSDS 244

Query: 226 YLGKVFDI------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
              +  +I      H  G D+I  H          A  +     ++ H G+  +EG KMS
Sbjct: 245 ---EKLNIFWPSVHHLVGKDIIRFHCV-IWPIMLIALGLNPPVTVFAH-GWWTVEGEKMS 299

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQR-------- 326
           KS GN +   E+ +        +     R  +L    RE       DF+ Q         
Sbjct: 300 KSKGNVVDPFEMADV-------YGVDPFRYFVL----REVPFGLDGDFSEQAMVLRINSD 348

Query: 327 ------------LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV----------SA 364
                       L   +          T+   +D  + + L +  + V           A
Sbjct: 349 LANDLGNLLNRTLQMVKNFRDGIVPAPTNFESLDKEIETLLQSTFSQVEESMSCFAYEEA 408

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
           ++A+  L R   K  D           LG E  +E L+  + +  E L
Sbjct: 409 LKAIWALIRRGNKYID-----ETMPWKLGKEGPQERLDTVLFVLAEML 451


>gi|291333442|gb|ADD93144.1| putative tRNA synthetases class I I L M and V [uncultured archaeon
           MedDCM-OCT-S05-C57]
          Length = 953

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 64/180 (35%), Gaps = 34/180 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            +D+   G DLI  H    +         E     +  NG++ ++G KMSKS GNF T+ 
Sbjct: 580 PYDLRVSGKDLIQNHLSFSLYNHTAMFEKEMWPKGFAVNGWVLVDGEKMSKSKGNFFTLK 639

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSK-- 344
           EL+        ++ A V+R  +      E +D   + +     A   L  W         
Sbjct: 640 ELVT-------NYSADVVRFTLCNAG--EGLDDPNWELSFAETAGKKLENWLNFVKENRG 690

Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
                   +D    + + +   T       +K  + S +       F  S  +L  E+ +
Sbjct: 691 KGRRDSHPVDDWFRAIMSD---TA------YKATKASNRLK-----FRTSTRLLFFELPQ 736


>gi|118580084|ref|YP_901334.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502794|gb|ABK99276.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 506

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 81/449 (18%), Positives = 133/449 (29%), Gaps = 115/449 (25%)

Query: 25  NIRMYVCGPT--VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P   V D  HIG+A   +  DVL R  R    +     V  +T  D+     
Sbjct: 2   KPSFYVTTPIYYVNDVPHIGHAYTTVAADVLARYKRLMGYD-----VYFLTGSDEH---G 53

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
            + E  +    +    +  +  +++     RL         R T   H   +  L   I+
Sbjct: 54  QKVEKAATTAGETPLELADRVVKRYQALWERLGISNNDF-IRTTQERHKKGVSQLFSLIM 112

Query: 141 LHGHAYEANNEIIFDTSS---------IPNYGSFSRRKIDEQKMGT--------RVPEKY 183
             G  Y    E  + T           I +      R +++ K  +        +     
Sbjct: 113 ERGDIYLGEYEDWYCTPCETFWPETQLIEDRCPDCNRPVEKLKEESYFFRMSKYQEQLLA 172

Query: 184 HKKNPADFILWKRSTPMEPGW-------------ESPWGRGRPG--------WHIECSAM 222
           H +   DFI  K        +                WG   PG        W    +  
Sbjct: 173 HIEANPDFIQPKSKRNEIISFVKEGLRDLSISRTTFSWGIPVPGNDKHIVYVWFDALTNY 232

Query: 223 SSHYLGKVFD------------IHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNG 269
            +  LG   D            +H  G D L F  H         A  +     ++ H G
Sbjct: 233 LTA-LGYP-DSTAEYGRFWPANVHLIGKDILRF--HTVYWPTFLMAAGLPLPEKVFAH-G 287

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTV 324
           +  +EG+KMSKS  N +  N L++        +   V+R  ++    RE       DF+ 
Sbjct: 288 WWTVEGQKMSKSLQNVVEPNMLID-------KYGVDVVRYFLM----REVPFGLDGDFSH 336

Query: 325 QRLTE------------------------------AEILLSKWPQTSTSKGIIDPAVLSA 354
             L +                              A   L++   +   K     A +  
Sbjct: 337 TALIQRLNSDLANDLGNLLSRSTAMAVKYFGGILPAATELTEIDHSLQEKTSAMIAAVDK 396

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLP 383
             ++L    A+QA+ ++     K  D   
Sbjct: 397 FMDELAFSKALQAIWEVISAGNKYIDDCA 425


>gi|302038229|ref|YP_003798551.1| methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300606293|emb|CBK42626.1| Methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 663

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 63/332 (18%), Positives = 105/332 (31%), Gaps = 76/332 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +        +T +D+      + +  +     
Sbjct: 16  VNDVPHIGHAYTTVAADVLARYWRLRGRDVFF-----LTGLDEH---GQKVQQAAAKAGV 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--- 149
           A      +   QF     RL         R T+  H   +   +Q +      Y+A+   
Sbjct: 68  APQAHCDRLAPQFTNLWQRLNISN-DAFIRTTDKPHQAVVQRYLQQLYDKQLIYKADYTG 126

Query: 150 ----------------NEIIFDTS------SIPNY----GSFSRRKIDEQKMGTRVPEKY 183
                           N +  D        S  NY    G +  R I+  +         
Sbjct: 127 WYCTYDERFWTEKDVVNGLCPDCKRPIERLSEHNYFFKMGQYQERLIEHIRTHDDFIRPV 186

Query: 184 HKKNPAD-FILWKRSTPMEPGWESPWGRGRPGWHIEC-------------------SAMS 223
            ++N    F+  +     +     P  + R  W IE                    SA+ 
Sbjct: 187 SRRNEVLGFL--QTQKLGDLSISRP--KSRLSWGIELPFDKEYVTYVWFDALVNYVSALE 242

Query: 224 SHYLGKVF---DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
                + F   D H  G D++  H           +R    + I+ H G+  ++G KMSK
Sbjct: 243 YKPGLERFWPADAHLVGKDILTTHAVYWSTMLMALERPLPHS-IFAH-GWWTVDGEKMSK 300

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           S GN +  N +++        + A   R  +L
Sbjct: 301 SRGNVVDPNAMID-------QFGADAFRYFLL 325


>gi|18075762|emb|CAD11307.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 59

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 6/63 (9%)

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
            +  ++++    IE  ++ER      K F  AD IR++L +    L D        + T 
Sbjct: 1   FQLGVSESEKQEIENKIEERKRAKAQKDFLKADSIREELLNHKIALMDT------PQGTI 54

Query: 457 WKQ 459
           W++
Sbjct: 55  WEK 57


>gi|152996926|ref|YP_001341761.1| leucyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189030284|sp|A6VZE7|SYL_MARMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150837850|gb|ABR71826.1| leucyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 815

 Score = 59.5 bits (143), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 46/177 (25%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
           +  E    + +  G +N +G KMSKS GN +   E++E        + A  +RL M+   
Sbjct: 554 NSDEPFKRL-LTQGMVNKDGTKMSKSKGNTVDPQEMIE-------KYGADTVRLFMMFSA 605

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALY--------------- 356
              + +++    +  A   L +    S   T+ G +    ++ L                
Sbjct: 606 PPEQSLEWNDAGVDGASRFLRRLWALSYRHTNAGKVGELNIAELNGAQKALRRKTHETIQ 665

Query: 357 ---ND------LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
              +D       NT  AI A+ +L  E +K  D           LG+ V +E L   
Sbjct: 666 KVSDDIERRQTFNT--AIAAVMELCNEISKFEDSSE--------LGLAVEQEALEAA 712


>gi|18075771|emb|CAD11313.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
 gi|18075774|emb|CAD11315.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 54

 Score = 59.1 bits (142), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 6/58 (10%)

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           +++    IE  ++ER    + K F  AD IR++L  +   L D        + T W++
Sbjct: 1   SESEKQEIENKIEERKRAKERKDFLKADSIREELLKQKIALMDT------PQGTIWEK 52


>gi|15921749|ref|NP_377418.1| leucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|15622536|dbj|BAB66527.1| 894aa long hypothetical leucyl-tRNA synthetase [Sulfolobus tokodaii
           str. 7]
          Length = 894

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 62/173 (35%), Gaps = 14/173 (8%)

Query: 222 MSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           M + +L     DI   G DLI  H    I         E        NGF+  EG+KMSK
Sbjct: 515 MRNEFLYWYPLDIRHSGKDLIPNHLSFFIFNHAAIFPEELWPKAIAVNGFVLYEGKKMSK 574

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQ 339
           S  N I + + L       R +   V+R+A+  T      ++F+         +L ++ +
Sbjct: 575 SLRNIIPLRKAL-------RIYSPDVVRIALTSTADMGSDVNFSDSYAKSVGEILRRYYE 627

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
                   D        N L        +  +   STKN D +   +    IL
Sbjct: 628 FIKELPKYDGEGSEFANNWLK-----AQVSSIVLSSTKNMDNIDFRSTINDIL 675


>gi|221135353|ref|ZP_03561656.1| isoleucyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 941

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 27/185 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   E+          + A ++RL +
Sbjct: 578 SVAMHGHAPYKQVLTHGFTVDQHGRKMSKSVGNVVAPQEVFN-------KYGADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T YR  I  + + L  +     +   T+     +    +PA       D      + A
Sbjct: 631 ASTDYRSEIAVSDEILKRSADAYRRIRNTARFLLANLSGFNPAT------DCVAPEDMVA 684

Query: 368 L--HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKF 425
           L    +A+  T  ++++  +        + V  + L +  SI +  L    L ++K +++
Sbjct: 685 LDSWAMAKAQTTQNEIIAAYEKYD----LLVVTQKLMQFCSIDMGSLY---LDIIKDRQY 737

Query: 426 -SSAD 429
            + AD
Sbjct: 738 TAKAD 742


>gi|48428670|sp|Q970Z6|SYL2_SULTO RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
          Length = 944

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 62/173 (35%), Gaps = 14/173 (8%)

Query: 222 MSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           M + +L     DI   G DLI  H    I         E        NGF+  EG+KMSK
Sbjct: 565 MRNEFLYWYPLDIRHSGKDLIPNHLSFFIFNHAAIFPEELWPKAIAVNGFVLYEGKKMSK 624

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQ 339
           S  N I + + L       R +   V+R+A+  T      ++F+         +L ++ +
Sbjct: 625 SLRNIIPLRKAL-------RIYSPDVVRIALTSTADMGSDVNFSDSYAKSVGEILRRYYE 677

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
                   D        N L        +  +   STKN D +   +    IL
Sbjct: 678 FIKELPKYDGEGSEFANNWLK-----AQVSSIVLSSTKNMDNIDFRSTINDIL 725



 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 2/74 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYVRNITDIDDKIIERARQEHPSI 90
           P      H+G+ R  +  D+  R +R         + +    T I     + A+ +   I
Sbjct: 36  PYPNSPFHLGHGRTYVTCDIYARYMRMKGYNVLFPMGFHYTGTPIIAMADDVAKGDKELI 95

Query: 91  PINDAISIITSKNT 104
            I   I  I     
Sbjct: 96  DIFKNIYEIPDNVI 109


>gi|320161482|ref|YP_004174706.1| hypothetical protein ANT_20800 [Anaerolinea thermophila UNI-1]
 gi|319995335|dbj|BAJ64106.1| hypothetical protein ANT_20800 [Anaerolinea thermophila UNI-1]
          Length = 352

 Score = 58.7 bits (141), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%)

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
           E+    I   I  LV+ER      + +  AD +RKQ+   G+++ D  +   
Sbjct: 297 ENAPSTIPREITTLVEEREKARLARNWEKADSLRKQILEMGYVIRDTPHGPE 348


>gi|255075635|ref|XP_002501492.1| predicted protein [Micromonas sp. RCC299]
 gi|226516756|gb|ACO62750.1| predicted protein [Micromonas sp. RCC299]
          Length = 1093

 Score = 58.3 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 53/153 (34%), Gaps = 34/153 (22%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
               FD+   G DLI  H      N  A         K    +  NG L L G KMSKS 
Sbjct: 665 FWYPFDLRVSGKDLIQNHLTFAIYNHTAIWE--GDESKWPRGFRTNGHLLLNGEKMSKST 722

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMT----------H---------YREPIDFT 323
           GNF T+   +E        + A  +R A+             H         + + +++ 
Sbjct: 723 GNFKTLKTAIE-------EYSADAMRFALADAGDGIEDANFVHDTANAAILRFTKELEW- 774

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
           ++ + EA     K     +S    D    +A+ 
Sbjct: 775 IESIREASAQ-GKLRAADSSATFADKVFANAID 806


>gi|298249675|ref|ZP_06973479.1| Cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297547679|gb|EFH81546.1| Cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 361

 Score = 58.3 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 7/78 (8%)

Query: 382 LPIFNASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           +    A    L   + +++L   + S  I+ LV  R  L   K++  AD +R  L + G 
Sbjct: 285 IETLLAPGETLDPRIEEQNLAGALPSPLIDALVTIRTDLRAAKQWPFADRLRDTLSTYGI 344

Query: 441 ILEDYKNPDNGQRMTRWK 458
           ++ED        + ++W+
Sbjct: 345 VIEDT------PQGSQWR 356


>gi|307243131|ref|ZP_07525305.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306493491|gb|EFM65470.1| leucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 806

 Score = 58.3 bits (140), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 63/190 (33%), Gaps = 39/190 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G + ++G KMSKS G
Sbjct: 514 PVDQYIGGVEHAILHLLYARWFTKAFKKLGWTSHDEPFKNL-LTQGMVLMDGSKMSKSKG 572

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  EL+E        + A   RL +L        ++++ Q +      L++  +   
Sbjct: 573 NTVSPVELVE-------KYGADTARLFILFAAPPERDLEWSEQGVEGCFKFLNRVYRLVD 625

Query: 343 SKGIID------------------------PAVLSALYNDLNTVSAIQALHKLARESTKN 378
               +                           V   L +     +AI AL +L  +  K 
Sbjct: 626 ELAPVAKLELEFGNLTKADKDMRAKTNNTLKKVTEDLNDKFGFNTAIAALMELINDLYKY 685

Query: 379 HDLLPIFNAS 388
            +L    +A 
Sbjct: 686 KELEDRNDAV 695


>gi|154253553|ref|YP_001414377.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154157503|gb|ABS64720.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 520

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 66/336 (19%), Positives = 102/336 (30%), Gaps = 78/336 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  DV+ R  R    +     VR +T +DD   + A+          
Sbjct: 16  PNGPPHIGHAYEVITTDVIARYKRLDGYD-----VRFLTGVDDHGQKMAQTAKAK---GT 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +   +F+    RL         R T   H     +L + I   G  Y      
Sbjct: 68  TPQALADEMAPKFLAMDERLNISNDDF-IRTTEARHEKACQHLWEKIAAKGDIYTGTYSG 126

Query: 153 IFDTSSIPNYGS------FSRRKI-----------DEQKMGTRVPEKYHK-----KNPAD 190
            +       Y           +K+           +E+    R+     K     ++  D
Sbjct: 127 WYSVRDEAFYDEDELTTGEGGQKLAPGTGTPVEWMEEETYFFRLSAYQEKLLALYESQPD 186

Query: 191 FILWKRSTPMEP----------------GWESPWGRGRPG--------WHIECSA----- 221
           FI    S   E                   +  WG G PG        W    +      
Sbjct: 187 FIQ-PASRRNEILAFVKRGLNDLSISRARTKLDWGVGVPGDPNHVMYVWIDALTNYITGL 245

Query: 222 ----MSSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
               M      + +  D+H  G D++  H     A    A+       ++ H GFLN+ G
Sbjct: 246 GYPDMDGDLFKRYWPADMHIIGKDIVRFHAVIWPAMLMAAEVALP-KRVFGH-GFLNVRG 303

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            KMSKS GN I    + +T       +    IR   
Sbjct: 304 EKMSKSVGNVIDPFTITDT-------YGVDPIRYFF 332


>gi|271965078|ref|YP_003339274.1| cysteinyl-tRNA synthetase-like protein [Streptosporangium roseum
           DSM 43021]
 gi|270508253|gb|ACZ86531.1| Cysteinyl-tRNA synthetase-like protein [Streptosporangium roseum
           DSM 43021]
          Length = 398

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 15/119 (12%)

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHILGIEV 396
           +    +AL    NT  A QA+  L  E TK             +   I       LG   
Sbjct: 281 EQRFGAALGE-HNTAEATQAVLDLEAEITKWAADTEEDEGGVDEAREILRHLVTRLGRLA 339

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
                   ++  +E L+  R  L +   + SAD +R+ L + G  +ED  +   G R T
Sbjct: 340 DTSEPRDRLAPLVEPLLALRERLREQGAYDSADALREALAAGGVSIEDGPD---GPRWT 395


>gi|225849056|ref|YP_002729220.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643562|gb|ACN98612.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 626

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I  DV+ R  R    +   T+    TD   + I++A +E        
Sbjct: 14  VNDVPHLGHAYTTIACDVMARYYRQKGVD---TFFLTGTDEHGQKIQKAAEEK-----GI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  K    F     +L         R T  +HI  + ++ Q    +G  Y A  E 
Sbjct: 66  HPKELADKTHLSFKNLWEKLNISY-DRFIRTTDPDHIKAVQHIFQKCYENGDIYLAEYES 124

Query: 153 IFDT 156
            +  
Sbjct: 125 YYCV 128



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  IE    ++ H G+  +EG KMSKS GN +     
Sbjct: 253 DVHVVGKDILRFHAVYWPAFLMSA-GIEIPKKVFAH-GWWTVEGHKMSKSLGNVV----- 305

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                     +    +R  +L
Sbjct: 306 --DPFKAADEYGVDQLRYFLL 324


>gi|224009692|ref|XP_002293804.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220970476|gb|EED88813.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 579

 Score = 57.9 bits (139), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 66/337 (19%), Positives = 107/337 (31%), Gaps = 82/337 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +    +  + TD         + E  +   N 
Sbjct: 73  VNDKPHIGHAYTSLACDVIARYMRLSGRD---VFFLSGTD-----EHGQKVETTAKNANM 124

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                    +  F +  T L         R T  +H   + +L   ++  G  Y  + E 
Sbjct: 125 EPLAFCDMVSASFKELLTLLNISN-DEFIRTTDEDHKKAVQHLWNVLVEKGAIYLGSYEG 183

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST---------PMEPG 203
            +       Y   +  ++ + K  T    ++ KK  + F  +K S             P 
Sbjct: 184 WYSVRDECYY---NESELVDGKAPTGAEVEWVKKEDSYF--FKLSEYQDELLNYYEAHPD 238

Query: 204 WESP--------------------------WGRGRPG--------WHIECSAMSSHYLGK 229
           + +P                          WG   PG        W I+        LG 
Sbjct: 239 FIAPESRKNEVVSFVKGGLKDLSISRTTFDWGVPVPGDDDHVMYVW-IDALTNYMSALGY 297

Query: 230 V-------FD------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
                   FD      +H  G D++  H     A    A  I     I+ H G+   +G 
Sbjct: 298 PNTEPGGNFDKFWPASLHVVGKDILRFHAVYWPAFLLAA-GIPLPKRIFAH-GWWTKDGE 355

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           K+SKS GN I   EL++T       +     R  ++ 
Sbjct: 356 KISKSLGNVIDPVELIDT-------YGVDPTRFFLMS 385


>gi|117929259|ref|YP_873810.1| cysteinyl-tRNA synthetase-like [Acidothermus cellulolyticus 11B]
 gi|117649722|gb|ABK53824.1| Cysteinyl-tRNA synthetase-like protein [Acidothermus cellulolyticus
           11B]
          Length = 431

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 11/97 (11%)

Query: 366 QALHKLARESTKNHDLLPIFNASAHI---LGIEVCKEHLN--KNISIAIEKLVQERLILL 420
           QA+   + ++ ++ D          +   LG       L+    ++  +  L+  R    
Sbjct: 336 QAIQDWSADTLQSSDRDEARRELRSLIVRLGEFAQAGALDTSDLVAPFVTALLDVRSQAR 395

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
               + +AD IR +L   G  + D  +        RW
Sbjct: 396 SRGDYQTADDIRDRLIRAGVEVRDTPD------GVRW 426


>gi|326494718|dbj|BAJ94478.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326516972|dbj|BAJ96478.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1095

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 63/199 (31%), Gaps = 51/199 (25%)

Query: 198 TPMEPG---WESPWGRG-RPGWHIE---CSAMSSHY-LGKVFDIHGGGLDLIFPHHENEI 249
            P E     WE  +  G  P  +I     S M   +     FDI   G DLI  H    I
Sbjct: 632 KPEEMTDEVWEYVFCDGPAPSSNISPALLSKMKQEFKYWYPFDIRVSGKDLIQNHLTFSI 691

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
                          +  NG L L   KMSKS GNF T+ E +E                
Sbjct: 692 YNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFRTLREAIE---------------- 735

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
                      DF+           +++       G+ D   +        T +A  A+ 
Sbjct: 736 -----------DFSSDA--------TRFALADAGDGMDDANFV------FETANA--AIL 768

Query: 370 KLARESTKNHDLLPIFNAS 388
           +L +E     +++   ++ 
Sbjct: 769 RLTKEIAWMEEVIAAESSL 787


>gi|145345960|ref|XP_001417466.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577693|gb|ABO95759.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 1094

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 39/167 (23%)

Query: 221 AMSSHY-LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEG 275
            M + +     FD+   G DLI  H      N  A        +     +  NG L L  
Sbjct: 664 RMINEFNFWYPFDLRVSGKDLIQNHLTFAIYNHTAIWE---DEKMWPRSFRTNGHLLLNN 720

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEI 332
            KMSKS GNF T+ + +E        + A  +R  +      + +   ++       A +
Sbjct: 721 EKMSKSTGNFKTLKQAIE-------EFSADAMRFTLADAG--DTVEDANYVDDTANAAIL 771

Query: 333 LLSK---WPQ------------TSTSKGIIDPAVLSALYNDLNTVSA 364
            L+K   W +            T+     ID    +A+    NT  A
Sbjct: 772 RLTKEITWYEEQMAEIEAGNLRTTEPNKFIDRVFTNAM----NTAIA 814


>gi|144899823|emb|CAM76687.1| Methionyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 518

 Score = 57.6 bits (138), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 52/156 (33%), Gaps = 19/156 (12%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +      F    P    +Y     V D  HIG+A   +  DVL R  R    +     V+
Sbjct: 1   MSGSKKTFYVTTP----IYY----VNDKPHIGHAYTTLACDVLARFKRLDGYD-----VK 47

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--H 128
            +T  D+      + E  +     +   +   N+  F +   RL C       R T   H
Sbjct: 48  FLTGTDEH---GQKVEKSAETAGISPQALADMNSANFRELAARLNCSNDDF-IRTTEPRH 103

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
           +  +  L   ++  G  Y  + E  +       YG 
Sbjct: 104 VASVQALWNKLVQSGDIYLGHYEGWYSVRDEAFYGE 139



 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  I+    ++ H G+   EG+K+SKS GN I    L
Sbjct: 259 DLHMVGKDIVRFHAVYWPAFLMAA-GIKPATRVFAH-GWWTNEGQKISKSVGNVIDPLGL 316

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +E        +    +R  +L
Sbjct: 317 IE-------KYGLDQVRYFLL 330


>gi|327398216|ref|YP_004339085.1| methionyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327180845|gb|AEA33026.1| Methionyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 621

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 83/443 (18%), Positives = 140/443 (31%), Gaps = 106/443 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG++   +  D L R  R     + V ++    +   KI + A+        N 
Sbjct: 13  VNDVPHIGHSYTTLAADTLARYKRLLG--EDVFFLTGTDEHGQKIQKAAKS------ANT 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEAN 149
               +  +  + F K   +L         R T+      + +    I      G  Y+  
Sbjct: 65  TPKQLADRVVENFKKLWKKLDITN-NFFVRTTDDYHQKCVQEAFEYI---YKKGDIYKGE 120

Query: 150 NEIIFDTSSIPNY----------GSFSRRKID---------EQKMGTRVPEKYHKKNPAD 190
            E  +       Y               RK+D         +         ++++ NP D
Sbjct: 121 YEGWYCIPCESYYSEIEIGENKTCPVCGRKLDLVKEESYFFKLSAYQDRLLEFYENNP-D 179

Query: 191 FIL-----------WKRSTPMEPGWESPWGRGRP----------GWHIEC----SAMSSH 225
           F+L            K          + +  G P           W        SA+   
Sbjct: 180 FVLPQTRYNEIKSFVKMGLKDLSITRTSFDWGIPVPFDDKHVIYVWFDALLNYVSAIGCR 239

Query: 226 YLGKVFD------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
                FD      +H  G D++  H     A     D         + +G+  ++G+KMS
Sbjct: 240 --KGDFDDIWPADVHFVGKDILRFHAVYWPAFLMALDL--PLPKHVVAHGWWTVDGKKMS 295

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQRLTE----- 329
           KS GN +  NE++E        +P    R  +L    R        DF+ + L E     
Sbjct: 296 KSLGNVVDPNEMIE-------KYPRDAYRYFLL----RNVPFGLDGDFSEKELIERINSD 344

Query: 330 ----AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-HDLLPI 384
                  LL++           +    SA+ +D        +L  LA+E+ K   D L +
Sbjct: 345 LVNDFGNLLNRSLTMMEKYSKGNIRRPSAINDD--------SLSILAKETFKKVEDSLKV 396

Query: 385 FNASAHILGIEVCKEHLNKNISI 407
           F     ++ I    +  NK I+ 
Sbjct: 397 FRFDEALIAIFDFIKSANKYIAQ 419


>gi|11499048|ref|NP_070282.1| methionyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122911|sp|O28819|SYM_ARCFU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2649118|gb|AAB89796.1| methionyl-tRNA synthetase (metS) [Archaeoglobus fulgidus DSM 4304]
          Length = 658

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 59/173 (34%), Gaps = 26/173 (15%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AH+G+ R  +  DV  R LR    E  V +V         I+  A Q+  
Sbjct: 5   TCGLPYANGKAHVGHLRTYVPADVYVRYLRMSGEE--VVFVCGSDCHGTPIVVNAEQQGL 62

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHA 145
                 +   +     + F+K    L         R T+   H  +   +++ +I  G+ 
Sbjct: 63  ------SPKELVDIYHEHFIKIFDALNIK-FDFYGR-TDSDYHHHRTTEIVKRLIEKGYV 114

Query: 146 YEANNEIIFD-----------TSSIPNY-GSFSRRKIDEQKMGTRVPEKYHKK 186
           Y    ++ +               I  Y G+ +R    +Q  G  +     K+
Sbjct: 115 YPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHLEPGEIKE 167


>gi|148906837|gb|ABR16564.1| unknown [Picea sitchensis]
          Length = 704

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 72/356 (20%), Positives = 108/356 (30%), Gaps = 84/356 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  D + R  R     K V ++    +  +KI   A  +  +    D
Sbjct: 159 VNAPPHMGSAYTTIAADAMARFQRLQG--KKVVFITGTDEHGEKIAMAAAAKGQNPK--D 214

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
               I     Q   KD      +      R TN   + I       II  G  Y A+ E 
Sbjct: 215 HCDRIACDY-QALWKDLD----ITYDKFIRTTNPCHEAIVKEFYTRIIAKGDIYHADYEG 269

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---------- 202
           ++  +    Y        DE     R P +  K++   F L K   P+E           
Sbjct: 270 LYCVN-CEEYKDGKELLEDECCPIHRKPCELRKEDNYFFSLSKYQKPLEELLTANPNFVQ 328

Query: 203 ---------GW-------------ESPWGRGRPG--------WHIEC----SAMSSHYLG 228
                     W                WG   P         W        SA+      
Sbjct: 329 PPYRLNEVQSWVKGGLRDFSISRATVEWGIPVPNDSKQTIYVWVDAMLGYVSALLKDENE 388

Query: 229 KVFD----------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
              D          +H  G D++  H     A    A+     A ++ H GFL  +G KM
Sbjct: 389 PTLDNAVAGGWPASLHLIGKDILRFHAVYWPAMLMSANLKLP-ATVFGH-GFLTKDGLKM 446

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDFTVQRLTE 329
            KS GN +   +L++        +    +R   L    R        D++ +R T 
Sbjct: 447 GKSLGNVLEPKDLIDR-------FGCDAVRYFFL----REIEFGNDGDYSEERFTN 491


>gi|303231424|ref|ZP_07318155.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513861|gb|EFL55872.1| leucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 822

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 31/146 (21%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++         + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIIN-------KYGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSK-------WPQTSTSKGIID----------------PAVLSALYNDLNT 361
           Q +  +   L +       + Q +      D                  V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIVDAYDQAAKENHTGDLTKDEVALRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNA 387
            +AI A+ +L      + D     NA
Sbjct: 684 NTAISAIMELVNAMYAHKDKAESVNA 709


>gi|326488563|dbj|BAJ93950.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1058

 Score = 57.6 bits (138), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 63/199 (31%), Gaps = 51/199 (25%)

Query: 198 TPMEPG---WESPWGRG-RPGWHIE---CSAMSSHY-LGKVFDIHGGGLDLIFPHHENEI 249
            P E     WE  +  G  P  +I     S M   +     FDI   G DLI  H    I
Sbjct: 595 KPEEMTDEVWEYVFCDGPAPSSNISPALLSKMKQEFKYWYPFDIRVSGKDLIQNHLTFSI 654

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
                          +  NG L L   KMSKS GNF T+ E +E                
Sbjct: 655 YNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFRTLREAIE---------------- 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
                      DF+           +++       G+ D   +        T +A  A+ 
Sbjct: 699 -----------DFSSDA--------TRFALADAGDGMDDANFV------FETANA--AIL 731

Query: 370 KLARESTKNHDLLPIFNAS 388
           +L +E     +++   ++ 
Sbjct: 732 RLTKEIAWMEEVIAAESSL 750


>gi|303228946|ref|ZP_07315756.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302516360|gb|EFL58292.1| leucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 822

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 52/146 (35%), Gaps = 31/146 (21%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++         + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIIN-------KYGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSK-------WPQTSTSKGIID----------------PAVLSALYNDLNT 361
           Q +  +   L +       + Q +      D                  V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIVDAYDQAAKENHTGDLTKDEVALRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNA 387
            +AI A+ +L      + D     NA
Sbjct: 684 NTAISAIMELVNAMYAHKDKAESVNA 709


>gi|326502946|dbj|BAJ99101.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326515910|dbj|BAJ87978.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1094

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMSKS GNF+T+ 
Sbjct: 671 PFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFLTLK 730

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           E +         + +   R A+
Sbjct: 731 EAI-------LKYSSDATRFAL 745


>gi|294899809|ref|XP_002776754.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239883955|gb|EER08570.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1046

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 88/471 (18%), Positives = 142/471 (30%), Gaps = 96/471 (20%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D L R  R     + V +     +   KI ++A  +            
Sbjct: 177 AHIGHAYEAVAADALARWNRV--YGRDVEFCTGTDEHGQKIAQKAESK------GKTPQE 228

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           I       F     RL         R T+  H+     L + +   G  Y  N    +  
Sbjct: 229 ICDIYASAFQALNQRLRISN-DIYIRTTDEHHMKTCQKLWEIVSSKGDIYLDNYTGYYLV 287

Query: 157 S-----SIPNYGSFSRRKIDEQKMGTRVPEK--------------YHKKNPADFILWKR- 196
                 +      +  +     K  T + E+               H K+  DFI  K  
Sbjct: 288 REERYVTDAEAKEWDYKDPSTGKPLTEMSEESYFFRMGRYQQRLVDHIKSHPDFI--KPE 345

Query: 197 -------STPMEPGWE-------SPWGRGRPG--------WHIECSAMSSHYLGKVFD-- 232
                  +   EP  +         WG   PG        W    +   S   G   D  
Sbjct: 346 QYRQQILARLEEPLRDLSCSRRTFSWGIPIPGSDDHVMYVWFDALTNYLSAVNGLDSDKP 405

Query: 233 ------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLN-LEGRKMSKSNG 283
                  H  G D+I+ H         C               +GF+   EG+KMSKS G
Sbjct: 406 HYWPANAHIIGKDIIWFH----CVIWPCMLMSADIPLPESVAVHGFIQDAEGKKMSKSIG 461

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEIL-----LSKW 337
           N +  +++L+        +P   +R  ML    Y   + F+   +           L   
Sbjct: 462 NVVDPHDVLD-------KFPVDTVRWYMLSDAPYGGDLKFSTAAMINTHNADLCNGLGNL 514

Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----- 390
                + S G +    +  L    +    I  L    R+     +   I           
Sbjct: 515 VNRAIALSGGCVPEFSVKDLEKPFDLRKTIDDLDATMRQQDAISEGCAIIRQVTGATNEW 574

Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFS-----SADYIRKQLE 436
           I  +E  K   +K   +AI +L+ E + +L    ++      AD I ++L 
Sbjct: 575 ITRVEPWKIKDDKEKRMAIIRLLMESVYVLAH-LWAPFIPMGADKIFEKLA 624


>gi|46205790|ref|ZP_00048091.2| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 80

 Score = 57.2 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 25/77 (32%), Gaps = 8/77 (10%)

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQE--------RLILLKMKKFSSADYIRKQL 435
              A   +LG++                ++          R      + F++AD IR +L
Sbjct: 2   AVRAMLDVLGLDPGDAQWADRGDSRYAAVLDAVVGAELAARAEARASRDFATADAIRDRL 61

Query: 436 ESKGFILEDYKNPDNGQ 452
            + G  +ED  +     
Sbjct: 62  AAAGVAVEDSADGARWT 78


>gi|157964833|ref|YP_001499657.1| methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844609|gb|ABV85110.1| Methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 508

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI----QNIILHGHAYEANN 150
                T + ++ F    T +         R T H  +    +    Q ++ +G  YE   
Sbjct: 66  DPQQFTDQTSEIFRHLMTAMHISNDDF-IRTTEH--RHKEAVAVFWQKLLENGTIYEGFY 122

Query: 151 EIIFDTS 157
           E  +   
Sbjct: 123 EGWYAVR 129


>gi|39997330|ref|NP_953281.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|39984221|gb|AAR35608.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|298506267|gb|ADI84990.1| methionyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 510

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 131/429 (30%), Gaps = 103/429 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  +    E        +T  D+      + E  +    +
Sbjct: 14  VNDVPHIGHAYTTLAADVLARYKKLKGYEVFF-----LTGTDEH---GQKVEKAANTAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN-NE 151
               +  +  ++F     +L     T   R T   H   + ++   I+  G  Y     +
Sbjct: 66  TPLELADRVVKRFQGLWEKLDIQY-TDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEYED 124

Query: 152 IIF------DTSSIPNYGSF--SRRKIDEQKMGT--------RVPEKYHKKNPADFILWK 195
                     T +    G      R +D+ K  +        +     H +   DFI  K
Sbjct: 125 WYCTPCETFWTETQLIDGKCPDCNRPVDKLKEESYFFRMSKYQEQLLAHIEANPDFIQPK 184

Query: 196 RSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSSHYLGK----- 229
                   +                WG   PG        W    +   +  LG      
Sbjct: 185 SRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNEKHVIYVWFDALTNYITA-LGYPDEQS 243

Query: 230 ------VFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                   D+H  G D L F  H         A  +     ++ H G+  +EG+KMSKS 
Sbjct: 244 AFKTFWPVDVHLIGKDILRF--HAVYWPTFLMAAGLPVPKKVFAH-GWWTVEGQKMSKSL 300

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLM----------TH----YREPIDFTVQ--- 325
            N +  N L++        +    +R  +L           +H    +R   D       
Sbjct: 301 QNVVEPNMLVDR-------YGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGN 353

Query: 326 RLTEAEILLSKWPQ----TSTSKGIIDPAVL---SAL-------YNDLNTVSAIQALHKL 371
            L  +  +++K+          +  +D A      A+        ++L     +QA+ ++
Sbjct: 354 LLNRSTAMVNKYFDGVLPAPGPQTELDTAFREKTEAMVRQLDACMDELAFSKGLQAIWEV 413

Query: 372 ARESTKNHD 380
                K  D
Sbjct: 414 ISAGNKYID 422


>gi|220929274|ref|YP_002506183.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219999602|gb|ACL76203.1| isoleucyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 929

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 13/135 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ EGRKMSKS GN I   +++       + + A ++RL +
Sbjct: 576 SVATKGTAPYRKVLTHGYVVDGEGRKMSKSLGNGIDPADVI-------KEYGADILRLWV 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--AI 365
             + Y   I  +   L +   +  K   T+     +    +P   S  YNDLN +   A+
Sbjct: 629 ASSDYTTDIRISKDLLKQLSEVYRKIRNTARYILGNINDFNPDTDSVDYNDLNELDKWAL 688

Query: 366 QALHKLARESTKNHD 380
             +  L ++  + +D
Sbjct: 689 GRMTNLIKKVNEAYD 703


>gi|238019263|ref|ZP_04599689.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
 gi|237863962|gb|EEP65252.1| hypothetical protein VEIDISOL_01127 [Veillonella dispar ATCC 17748]
          Length = 822

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 31/149 (20%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++ T       + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIINT-------YGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSKWPQTSTSKGI-----------------------IDPAVLSALYNDLNT 361
           Q +  +   L +  +   +                          +   V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIVDAYNEEAKKNVTGELTKDEFALRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAH 390
            +AI A+ +L      + D     N++  
Sbjct: 684 NTAISAIMELVNAMYAHKDKAETINSALA 712


>gi|260891264|ref|ZP_05902527.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260859291|gb|EEX73791.1| isoleucine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 930

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 21/218 (9%)

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K N  D  + K  + M+  ++S             S +    L +  D++  G D
Sbjct: 517 DELLEKYNLKDVDIRKERSIMDVWFDSGVSHR--------SVLVPRNLPRPADLYLEGSD 568

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
                 ++ +  S  + +      I  H   ++ +GRKMSKS GN I   ++ E      
Sbjct: 569 QHRGWFQSSLLTSIASTKDAPYKRILTHGFTMDGQGRKMSKSLGNTILPKDITE------ 622

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSAL 355
             + A ++RL +    YRE +  +   L +      +   T+     +    D A     
Sbjct: 623 -KYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDYANDKVD 681

Query: 356 YNDLNTVS--AIQALHKLARESTKNHDLLPIFNASAHI 391
           YND+  +   A+  L +L  ++T+ +D    ++    I
Sbjct: 682 YNDMFEIDKWAMHKLEELKAKTTEFYDKYEFYSLFQEI 719



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 26/164 (15%)

Query: 14  KITEFQAIDPSNIRMY-------------VCGPTVY--DFAHIGNARPMIVFDVLYRLLR 58
           +       D     +Y               GP  Y     HIG+A   I+ D++ +  R
Sbjct: 32  QKEPLTLRDWKKAEIYEKSLNEGAPFFVLHDGP-PYANGDIHIGHALNKILKDIILKYKR 90

Query: 59  YYYGEKCVTY---VRNIT---DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
                           +     I +++ E+A+   P + I         K  ++  +   
Sbjct: 91  LRGYNAPYIPGWDTHGLPIEWKIMEELGEKAKNMTP-LQIRQECKKYALKWVEKQKEGFK 149

Query: 113 RLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEII 153
           RL  L     P  T    +  + + + + I  +G+ Y+    + 
Sbjct: 150 RLGILGNWDNPYITLMPEYEAEQLKVFKEIYENGYVYKGLKPVY 193


>gi|328793414|ref|XP_003251876.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
           [Apis mellifera]
          Length = 179

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 46/125 (36%), Gaps = 27/125 (21%)

Query: 354 ALYNDLNTVSAIQALHKLARESTKNH---------------DLLPIFNASAHI---LGIE 395
           AL +D NTV AI++L  L     K                  +  + N  + I    GI 
Sbjct: 50  ALADDFNTVQAIKSLINLIDIGNKMLHDSKDSNITYGTCIPAIAAVLNYISTIFSKFGIS 109

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKM------KK---FSSADYIRKQLESKGFILEDYK 446
                 +  I+  IE L++ R I+         K      + D IR +L + G I++D K
Sbjct: 110 NSSTTNDNKINNLIECLIKFRHIVRNKVLEHDVKDKTLLIACDKIRSELSTYGIIIKDCK 169

Query: 447 NPDNG 451
                
Sbjct: 170 TKTIW 174


>gi|313894560|ref|ZP_07828124.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
 gi|313440956|gb|EFR59384.1| leucine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
          Length = 822

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 31/149 (20%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++ T       + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIINT-------YGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSKWPQTSTSKGI-----------------------IDPAVLSALYNDLNT 361
           Q +  +   L +  +   +                          +   V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIVDAYNEEGKKNVTGELTKDEFVLRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAH 390
            +AI A+ +L      + D     N++  
Sbjct: 684 NTAISAIMELVNAMYAHKDKADTINSALA 712


>gi|257125155|ref|YP_003163269.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049094|gb|ACV38278.1| isoleucyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 930

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 84/218 (38%), Gaps = 21/218 (9%)

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
            E   K N  D  + K  + M+  ++S             S +    L +  D++  G D
Sbjct: 517 DELLEKYNLKDVDIRKERSIMDVWFDSGVSHR--------SVLVPRNLPRPADLYLEGSD 568

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
                 ++ +  S  + +      I  H   ++ +GRKMSKS GN I   ++ E      
Sbjct: 569 QHRGWFQSSLLTSIASTKDAPYKRILTHGFTMDGQGRKMSKSLGNTILPKDITE------ 622

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSAL 355
             + A ++RL +    YRE +  +   L +      +   T+     +    D A     
Sbjct: 623 -KYGADILRLWVSSVDYREDVRISENILQQMSDAYRRIRNTARFLMGNLNDFDYANDKVD 681

Query: 356 YNDLNTVS--AIQALHKLARESTKNHDLLPIFNASAHI 391
           YND+  +   A+  L +L  ++T+ +D    ++    I
Sbjct: 682 YNDMFEIDKWAMHKLEELKAKTTEFYDKYEFYSLFQEI 719



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 52/164 (31%), Gaps = 26/164 (15%)

Query: 14  KITEFQAIDPSNIRMY-------------VCGPTVY--DFAHIGNARPMIVFDVLYRLLR 58
           +       D     +Y               GP  Y     HIG+A   I+ D++ +  R
Sbjct: 32  QKEPLTLRDWKKAEIYEKSLNEGAPFFVLHDGP-PYANGDIHIGHALNKILKDIILKYKR 90

Query: 59  YYYGEKCVTY---VRNIT---DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
                           +     I +++ E+A+   P + I         K  ++  +   
Sbjct: 91  LRGYNAPYIPGWDTHGLPIEWKIMEELGEKAKNMTP-LQIRQECKKYALKWVEKQKEGFK 149

Query: 113 RLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEII 153
           RL  L     P  T    +  + + + + I  +G+ Y+    + 
Sbjct: 150 RLGILGNWDNPYITLRPEYEAEQLKVFKEIYENGYVYKGLKPVY 193


>gi|167042850|gb|ABZ07567.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine microorganism HF4000_ANIW137J11]
          Length = 1212

 Score = 57.2 bits (137), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 30/165 (18%)

Query: 196 RSTPMEPGWESPWGRGRPG------------WHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
            +   E  +E+ +G G PG            W  E       Y    +D+   G DLI  
Sbjct: 799 AAKLGEELFEALFGDGDPGAVPGIDAKQVEAWRTE---FEYWY---PYDLRVSGKDLIQN 852

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           H    +         +K    +  NG++ + G KMSKS GNF TI +L++        + 
Sbjct: 853 HLSFSLFNHTAVFSRDKWPRGFAVNGWVLVNGEKMSKSRGNFYTIRQLIDR-------YG 905

Query: 304 APVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKG 345
           A   RL +  +   E +D   +       A   L +W +    + 
Sbjct: 906 ADATRLTLCNSG--EGLDDPNWEASFADTAGRKLERWLRFVAEQA 948


>gi|294793765|ref|ZP_06758902.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294455335|gb|EFG23707.1| leucine--tRNA ligase [Veillonella sp. 3_1_44]
          Length = 822

 Score = 56.8 bits (136), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 31/149 (20%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++ T       + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIINT-------YGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSKWPQTSTSKGI-----------------------IDPAVLSALYNDLNT 361
           Q +  +   L +  +   +                          +   V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIIDAYNEEAKKNVTGELTKDEFGLRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAH 390
            +AI A+ +L      + D     N++  
Sbjct: 684 NTAISAIMELVNAMYAHKDKAETINSALA 712


>gi|15604526|ref|NP_221044.1| methionyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226189|sp|Q9ZCP0|SYM_RICPR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3861220|emb|CAA15120.1| METHIONYL-TRNA SYNTHETASE (metS) [Rickettsia prowazekii]
 gi|292572314|gb|ADE30229.1| Methionyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 508

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D AHIG+A   +  DV+ R +R+   +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVAHIGHAYTSVASDVIARFMRFCGKD-----VMFLTGTDEH---GQKVEKAAINQNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K +Q F      +         R T   H   +    + ++ +G  YE   E 
Sbjct: 66  DPQTFTDKTSQNFRDLMVAMNISNDDF-IRTTENRHKKAVAVFWKKLLDNGAIYEGFYEG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYSVRDEAFY 134


>gi|294791905|ref|ZP_06757053.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294457135|gb|EFG25497.1| leucine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 822

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 31/149 (20%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++ T       + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIINT-------YGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSKWPQTSTSKGI-----------------------IDPAVLSALYNDLNT 361
           Q +  +   L +  +   +                          +   V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIIDAYNEEAKKNVTGELTKDEFGLRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAH 390
            +AI A+ +L      + D     N++  
Sbjct: 684 NTAISAIMELVNAMYAHKDKAETINSALA 712


>gi|315638476|ref|ZP_07893653.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481467|gb|EFU72094.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 626

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 65/354 (18%), Positives = 107/354 (30%), Gaps = 88/354 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R         ++    +   KI + A+ +      N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLSG--HKTLFLTGTDEHGQKIEQAAKNK------NH 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANN 150
           +      K + +F K              R T+   + I  ++     +   G  Y+   
Sbjct: 63  SPKEYADKISLEFKKLWDEFEISY-DIYARTTD--ERHIKFVKQVFLKMWEKGDIYKGEY 119

Query: 151 EIIFDTS--------------SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
           E  +  S                P+ G  +R  + E+    R+      K   D + W  
Sbjct: 120 EGYYCVSCESFFTQSQLINQKCCPDCGKETRL-LKEESYFFRLS-----KYEKDILKWYE 173

Query: 197 STPMEPG---------------------WESPWGRGRPG-----------W----HIECS 220
           S P+ P                          WG   P            W     I  S
Sbjct: 174 SEPIVPKNKKAELVNFIENGLKDLSITRTSFEWGIKIPSNLNDDKHIIYVWLDALFIYIS 233

Query: 221 AMSSHY----LG--KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           ++        LG    F +H  G D++  H     A    AD           +G+   +
Sbjct: 234 SLELDEKSENLGFLPAF-VHLVGKDILRFHAIYFPAFLMSADL--PLPKHIAAHGWWTRD 290

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           G KMSKS GN +    + +       ++     R  +L    +    DF+   L
Sbjct: 291 GEKMSKSKGNALYPKIIAD-------AYGLEAFRYFLLREVPFGNDGDFSETML 337


>gi|118576573|ref|YP_876316.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118195094|gb|ABK78012.1| methionyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 548

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 65/362 (17%), Positives = 105/362 (29%), Gaps = 114/362 (31%)

Query: 39  AHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
            H+G+ A   +  DV  R LR    E    Y+    D    I+ ++ +E           
Sbjct: 18  IHLGHIASTYLPADVTTRFLRLKGVE--AYYICASDDYGTPILIQSEKE------GKTPE 69

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII----LHGHAYEAN---- 149
                  ++  +D   L   +     R ++  P     +Q++       GH YE      
Sbjct: 70  EYVEHWNRRDREDFEALGI-SFDFFSRTSS--PANTEFVQHVFTVLNEGGHIYEDEVVQF 126

Query: 150 --------------NEIIFDTSSIPNY--------------------------------- 162
                                 +   Y                                 
Sbjct: 127 YCENDSKFLPDRYVRGTCPHCKAAEQYSDLCESCGRVPEEIADPHCAICGNTPVKRSSRH 186

Query: 163 -----GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES----PWGRGRP 213
                G FS R + E   G    ++  KK   ++I           W+     PWG   P
Sbjct: 187 YFFRLGGFSGR-LSEWLEGNTNLQEDVKKYVQNWI-----KSGLSDWDITRDIPWGVPIP 240

Query: 214 ----------GW---HIECSAMSSHYLG----------KVFDI-HGGGLDLIFPHHENEI 249
                     GW   H+   + +S +LG             DI H  G D+++ HH   +
Sbjct: 241 LDGAAGKVFYGWFDNHLAYISAASEFLGKRGIDAKEFWNSADIYHFIGKDIVY-HHYLFL 299

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
                     K  +     G L LE +K+SKS   +I + E L         +PA  +R 
Sbjct: 300 PAIRLGTGEYKLPDYIPTRGHLTLESKKISKSRNWYIGLREFLG-------EYPADYLRF 352

Query: 310 AM 311
            +
Sbjct: 353 YL 354


>gi|76363441|sp|Q4J8J7|SYL2_SULAC RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
          Length = 942

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 28/181 (15%)

Query: 221 AMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           AM   +L     D+   G DL+  H    I         +        NGF+  +G+KMS
Sbjct: 562 AMRDEFLYWYPLDVRHSGKDLVPNHLSFFIFNHAAIFPHQLWPKGIAVNGFVLYDGKKMS 621

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTV-------QRLTEAE 331
           KS  N + + + +       R +   VIR+A+         ++F+          L    
Sbjct: 622 KSLRNIVPLRKAI-------RMYSPDVIRIALTTNADIGSDVNFSDSYAKSIIDTLKNYY 674

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            LL K  +            L                +++    T+  D L + ++S  I
Sbjct: 675 DLLEKLKEFKGEDEGFPEKWLK------------SKFYQMVINVTQYMDSLDLRSSSNEI 722

Query: 392 L 392
           L
Sbjct: 723 L 723



 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 31/95 (32%), Gaps = 5/95 (5%)

Query: 15  ITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
              F    DP+  + +      Y     H+G+ R  +  D+  R +R         + + 
Sbjct: 14  KRVFDATPDPNKKKFFTTIAFPYPNSPFHLGHGRTYVTGDIYARYMRMRGYNVLFPMAFH 73

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
              T I     + A+ +   I I  +I  I     
Sbjct: 74  YTGTPIIAMADDVAKGDKELIDIFKSIYEIPDDVI 108


>gi|70607308|ref|YP_256178.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|68567956|gb|AAY80885.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 893

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 28/181 (15%)

Query: 221 AMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           AM   +L     D+   G DL+  H    I         +        NGF+  +G+KMS
Sbjct: 513 AMRDEFLYWYPLDVRHSGKDLVPNHLSFFIFNHAAIFPHQLWPKGIAVNGFVLYDGKKMS 572

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTV-------QRLTEAE 331
           KS  N + + + +       R +   VIR+A+         ++F+          L    
Sbjct: 573 KSLRNIVPLRKAI-------RMYSPDVIRIALTTNADIGSDVNFSDSYAKSIIDTLKNYY 625

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            LL K  +            L                +++    T+  D L + ++S  I
Sbjct: 626 DLLEKLKEFKGEDEGFPEKWLK------------SKFYQMVINVTQYMDSLDLRSSSNEI 673

Query: 392 L 392
           L
Sbjct: 674 L 674


>gi|269798025|ref|YP_003311925.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269094654|gb|ACZ24645.1| leucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 822

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 31/149 (20%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++ T       + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIINT-------YGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSK-WPQTSTSKGI----------------------IDPAVLSALYNDLNT 361
           Q +  +   L + W    T                          +   V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIVDTYNEEAKKNVTGELTKDEFALRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAH 390
            +AI A+ +L        D     N++  
Sbjct: 684 NTAISAIMELVNAMYAYKDKAETINSALA 712


>gi|284998014|ref|YP_003419781.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|284445909|gb|ADB87411.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 944

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L +  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRRMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHIL 392
                   +            ++++   +TK+ + L + +A+  +L
Sbjct: 689 E-------DTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELL 727



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           E  +  +   P               F +D  
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIK 127


>gi|227827809|ref|YP_002829589.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|227459605|gb|ACP38291.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
          Length = 944

 Score = 56.8 bits (136), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L +  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRRMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHIL 392
                   +            ++++   +TK+ + L + +A+  +L
Sbjct: 689 E-------DTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELL 727



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           E  +  +   P               F +D  
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIK 127


>gi|227830519|ref|YP_002832299.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227456967|gb|ACP35654.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
          Length = 944

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 59/166 (35%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L +  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRRMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHIL 392
                   +            ++++    TK+ + L + +A+  +L
Sbjct: 689 E-------DTFGFPEKWLSSRIYEITTNITKHMEALELRDAANELL 727



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           E  +  +   P               F +D  
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIK 127


>gi|323474877|gb|ADX85483.1| leucyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477618|gb|ADX82856.1| leucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 944

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L +  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRRMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHIL 392
                   +            ++++   +TK+ + L + +A+  +L
Sbjct: 689 E-------DTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELL 727



 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           E  +  +   P               F +D  
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIK 127


>gi|229585079|ref|YP_002843581.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|228020129|gb|ACP55536.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 944

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L +  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRRMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHIL 392
                   +            ++++   +TK+ + L + +A+  +L
Sbjct: 689 E-------DTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELL 727



 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           E  +  +   P               F +D  
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIK 127


>gi|229579332|ref|YP_002837730.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238619982|ref|YP_002914808.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|228010046|gb|ACP45808.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|238381052|gb|ACR42140.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
          Length = 944

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L +  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRRMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHIL 392
                   +            ++++   +TK+ + L + +A+  +L
Sbjct: 689 E-------DTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELL 727



 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           E  +  +   P               F +D  
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIK 127


>gi|229581908|ref|YP_002840307.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012624|gb|ACP48385.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 944

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 60/166 (36%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L +  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRRMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHIL 392
                   +            ++++   +TK+ + L + +A+  +L
Sbjct: 689 E-------DTFGFPEKWLSSRIYEITTNTTKHMEALELRDAANELL 727



 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 12/92 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           E  +  +   P               F +D  
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIK 127


>gi|20089423|ref|NP_615498.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|24418703|sp|Q8TTA3|SYK1_METAC RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
 gi|19914323|gb|AAM03978.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 533

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 62/367 (16%), Positives = 110/367 (29%), Gaps = 88/367 (23%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE------RARQ 85
           G T     HIGN R ++  D  YR L     +  + Y   I D  D + +       +  
Sbjct: 23  GITPSGHIHIGNMREVVTADAAYRALLDMGADARLIY---IADNYDPLRKVYPFLPESYA 79

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLA----CLAPTHQPRA---TNHI--- 129
           EH   PI++        +       + F++   RL      L      RA   T  I   
Sbjct: 80  EHVGKPISEVPCPCGDCANYAEHFLKPFIEALRRLGINPEVLRADEMYRAGLYTEAIKTA 139

Query: 130 ----PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG-----SFSRRKIDEQKMGTRVP 180
                ++  +++ +     A     +           G       +   ++ + +     
Sbjct: 140 LAKRDEIAKILEEVSGKTVA----EDWSPFNPRCNECGKITTTKVAGFDLEAETVDYVCA 195

Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG---KVF--DIH- 234
             +    P        +   +  W   W      W           LG   + F  D H 
Sbjct: 196 CGHSGTVPM-------AGGGKLTWRVDWPAR---W---------AVLGVTVEPFGKD-HA 235

Query: 235 --GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITINEL 291
             GG  D        +               ++    ++ L  R  MS S G  ++I+++
Sbjct: 236 SKGGSYD------TGKRIVREIYGHEPPFPIVY---EWIMLGKRGAMSSSTGVVVSISDM 286

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV-----QRLTEAEILLSKWPQTSTSKGI 346
           LE         P  V+R  ++ T   + I F         + E E L  K+ +   S G 
Sbjct: 287 LEVV-------PPEVLRYLIIRTKPEKHIQFDPGQPLLNLVDEYERLRDKFRENDPSLGD 339

Query: 347 IDPAVLS 353
            +  +  
Sbjct: 340 FEKRIYE 346


>gi|224437054|ref|ZP_03658035.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143526|ref|ZP_07805719.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128557|gb|EFR46174.1| isoleucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 935

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 22/152 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC   +I     I  H    +  G KMSKS GN I  +E+++T+        + ++RL +
Sbjct: 588 SCAVSKIAPYKQILTHGFTFDRNGEKMSKSKGNVIAPSEIIKTQG-------SEILRLWV 640

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSAI--- 365
            ++ Y+   + + + L +      K   T     +   I+P+V+       + + AI   
Sbjct: 641 ALSQYQSDQNISDEILKQVGEQYRKIRNTIRFLLANADIEPSVMVG----FDELGAIDRW 696

Query: 366 -----QALHKLARESTKNHDLLPIFNASAHIL 392
                 ++ + A      +D    F    + L
Sbjct: 697 ILQTCDSVFEDAYSYFDTYDFAKAFQVVMNFL 728


>gi|332140401|ref|YP_004426139.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550423|gb|AEA97141.1| isoleucyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 939

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 58/167 (34%), Gaps = 31/167 (18%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   E+            A ++RL +
Sbjct: 580 STAMHGHAPYKEVLTHGFTVDAHGRKMSKSVGNVVAPQEVTNKLG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ----- 366
             T YR  I  + + L  A     +   TS          L A  N  N   A+      
Sbjct: 633 ASTDYRGEIAVSDEILKRAADAYRRVRNTSR--------FLLANLNGFNVEDAVAENEMV 684

Query: 367 -----------ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                      AL +   E+ + +DLL +     H   IE+   +L+
Sbjct: 685 ALDRWIVARAKALQEELIEAYEKYDLLVVSQKLMHFCSIELGSFYLD 731


>gi|11499997|ref|NP_071243.1| leucyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3122899|sp|O30250|SYL_ARCFU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2650668|gb|AAB91241.1| leucyl-tRNA synthetase (leuS) [Archaeoglobus fulgidus DSM 4304]
          Length = 932

 Score = 56.8 bits (136), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 29/167 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         +K       NG+++LEG+KMSKS G  +T+ 
Sbjct: 583 PVDLRSSGKDLVANHLLFYLFHHVAIFPPDKWPRAIAVNGYVSLEGKKMSKSKGPLLTMK 642

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
             +       + + A V RL +L    Y    D+  + +      L ++        + +
Sbjct: 643 RAV-------QQYGADVTRLYILHAAEYDSDADWKSREVEGLANHLRRFYNLVKENYLKE 695

Query: 349 -------------------PAVLSALYNDLNTVSAI-QALHKLARES 375
                                V  A+ N L T  A+  A  +L  + 
Sbjct: 696 VGELTTLDRWLVSRMQRAIKEVREAMDN-LQTRRAVNAAFFELMNDV 741


>gi|302807078|ref|XP_002985270.1| hypothetical protein SELMODRAFT_157130 [Selaginella moellendorffii]
 gi|300147098|gb|EFJ13764.1| hypothetical protein SELMODRAFT_157130 [Selaginella moellendorffii]
          Length = 1103

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 26/146 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI 
Sbjct: 668 PFDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIR 727

Query: 290 ELLETKKFGGRSW-------------------PAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           + +         +                    + ++RL        + + +    L  A
Sbjct: 728 DAVNDFSADATRFGLADAGDSVDDANFVKLTANSAILRL-------TKEMAWMSDELIAA 780

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALY 356
           E  L K P T+ +  + +  +  A+ 
Sbjct: 781 EKDLRKGPPTTFADRVFENEINIAIN 806


>gi|325989806|ref|YP_004249505.1| Valyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574891|emb|CBZ40551.1| Valyl-tRNA synthetase [Mycoplasma suis]
          Length = 833

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D++FP     I  S   +      NI++H    N +G KMSKS GN I   EL    
Sbjct: 441 SGKDILFPWISRMIYLSLHFNAKPPFKNIFLHGILRNSQGEKMSKSLGNGILPEELYS-- 498

Query: 296 KFGGRSWPAPVIRLAMLM-THYREPIDFTV 324
                 + + VIR A L  TH+   I ++ 
Sbjct: 499 -----KYSSDVIRFAFLSNTHFDRDIKYSE 523


>gi|225850511|ref|YP_002730745.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646396|gb|ACO04582.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 624

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 50/137 (36%), Gaps = 13/137 (9%)

Query: 24  SNIRMYVCGPT--VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + YV  P   V D  H+G+A   +  DVL R  R    +   T+    TD     I+
Sbjct: 2   GRKKFYVTTPIYYVNDLPHLGHAYTTVAADVLARYFRQKGVK---TFFLTGTDEHGLKIQ 58

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNI 139
           ++ +E        +   +     ++F +    L         R T  +HI  + Y+ Q  
Sbjct: 59  KSAEEK-----GISPKELADITHKKFKELWEVLNISY-DRFIRTTDPDHIKAVQYIFQKC 112

Query: 140 ILHGHAYEANNEIIFDT 156
             +G  Y +  E  +  
Sbjct: 113 YDNGDIYLSEYESWYCV 129


>gi|125606241|gb|EAZ45277.1| hypothetical protein OsJ_29920 [Oryza sativa Japonica Group]
          Length = 1033

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMSKS GNF T+ 
Sbjct: 610 PFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFRTLR 669

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + +   R A+
Sbjct: 670 QAIE-------EFSSDATRFAL 684


>gi|32266689|ref|NP_860721.1| isoleucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81665720|sp|Q7VGX8|SYI_HELHP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|32262740|gb|AAP77787.1| isoleucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 930

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC   +      I  H    +  G KMSKS GN I+ +E+++T+        + ++RL +
Sbjct: 589 SCAIAKRAPYKQILTHGFTFDRNGEKMSKSKGNVISPSEIIKTQG-------SEILRLWV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++HY+   + + + L +      K   T
Sbjct: 642 ALSHYQSDQNISDEILKQVGEQYRKIRNT 670


>gi|71008184|ref|XP_758191.1| hypothetical protein UM02044.1 [Ustilago maydis 521]
 gi|46097863|gb|EAK83096.1| hypothetical protein UM02044.1 [Ustilago maydis 521]
          Length = 634

 Score = 56.4 bits (135), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 78/431 (18%), Positives = 130/431 (30%), Gaps = 98/431 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT--------YVRNITDIDDKIIERARQE 86
           V    HIG+    ++ D L R   Y                   ++TD+   +      E
Sbjct: 71  VNADPHIGHLYSDVIADALARYHGYMRSGYSTYNHCDGPNPSTNSMTDMVRPMFSTGTDE 130

Query: 87  HP------SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQN 138
           H       +   ++    +  + +Q+F            TH  R T+  H   + +L + 
Sbjct: 131 HGLKMQKVAEAASEDPRALCDRISQRFKHLADAANISY-THFIRTTDTDHKVAVEHLWRT 189

Query: 139 IILHGHAYEANNEIIFDTSSIPNY------------GSFSRRKIDEQKMGTRVPEKYHKK 186
           +   GH Y+ ++E  +  S    Y            G   R+ I+         E  +K 
Sbjct: 190 LRDKGHIYQGSHEGWYAVSDEAFYPEGQVKTVVGEDGKEVRQSIETGAKVEWSQEVNYKF 249

Query: 187 NPADF----ILWKRSTPM---------------EPGWESPWGRGRPG----WHI------ 217
             ++F    + W R+ P                E G  +     RP     W I      
Sbjct: 250 RLSNFQKPLVEWLRANPKAIQPAQKHAEVLAEVEAGL-TDLSISRPSSRLSWGIRVPEDD 308

Query: 218 ECSA-----MSSHYL---GKVF-------------------DIHGGGLDLIFPHHENEIA 250
           E S        ++YL   G  F                   D+H  G D++  H     A
Sbjct: 309 EHSIYVWVDALTNYLTAAGYPFAASTGQAEGNVALSSAWPADVHVVGKDIVRFHAIYWPA 368

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
               A          + +    +   KMSKS GN     E ++T            +R  
Sbjct: 369 MLLAA--GLPLPRTILAHSHWTMNKAKMSKSRGNVANPFEAIDTFGL-------DALRFF 419

Query: 311 MLM--THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
           +L    ++    D+    L E      +  Q       I    + A  ND    +A   L
Sbjct: 420 LLRVGGNFGSDSDYNPTVLVEYHRKYLQ-GQLGNLVSRICAPKIHARLNDFARDAATHVL 478

Query: 369 HKLARESTKNH 379
           H+  +E  + H
Sbjct: 479 HRPLKEQVELH 489


>gi|115478909|ref|NP_001063048.1| Os09g0378300 [Oryza sativa Japonica Group]
 gi|49389062|dbj|BAD26302.1| putative leucyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113631281|dbj|BAF24962.1| Os09g0378300 [Oryza sativa Japonica Group]
 gi|125605516|gb|EAZ44552.1| hypothetical protein OsJ_29173 [Oryza sativa Japonica Group]
 gi|215697136|dbj|BAG91130.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 1094

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMSKS GNF T+ 
Sbjct: 670 PFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFRTLR 729

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + +   R A+
Sbjct: 730 QAIE-------EFSSDATRFAL 744


>gi|297609759|ref|NP_001063593.2| Os09g0503400 [Oryza sativa Japonica Group]
 gi|255679038|dbj|BAF25507.2| Os09g0503400 [Oryza sativa Japonica Group]
          Length = 1095

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMSKS GNF T+ 
Sbjct: 672 PFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFRTLR 731

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + +   R A+
Sbjct: 732 QAIE-------EFSSDATRFAL 746


>gi|125563519|gb|EAZ08899.1| hypothetical protein OsI_31164 [Oryza sativa Indica Group]
          Length = 1094

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMSKS GNF T+ 
Sbjct: 670 PFDIRVSGKDLIQNHLTFSIYNHTALLPEHHWPRGFRCNGHLMLNSEKMSKSTGNFRTLR 729

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + +   R A+
Sbjct: 730 QAIE-------EFSSDATRFAL 744


>gi|315428060|dbj|BAJ49648.1| leucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 978

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 34/185 (18%)

Query: 195 KRSTPMEPGWESPW-GRGRPGW----------HIECSAMSSHYL-GKVFDIHGGGLDLIF 242
           K +      ++  + G G P            HIE  +M   +L     D+   G DL+ 
Sbjct: 557 KAAKLGVDVFDYVFLGLGDPRQLAEKYGIGQEHIE--SMRREFLYWYGVDLRVSGKDLVA 614

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
            H    +                  NG + +EG KMSKS GNF+T+ + L          
Sbjct: 615 NHLTFYLFHHTGIFEERHWPRGVAVNGMITIEGNKMSKSRGNFVTLKQALARHG------ 668

Query: 303 PAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAV 351
            +   RLA+L++   E +   D+  +   EA   +  +         + S   G  D  +
Sbjct: 669 -SDATRLALLLSA--EDLDDPDWRDKAAEEAGAFVKNFLSIVEKIAKEASDDVGPCDEWL 725

Query: 352 LSALY 356
           L+A  
Sbjct: 726 LAATD 730


>gi|315426839|dbj|BAJ48460.1| leucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
          Length = 978

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/185 (22%), Positives = 67/185 (36%), Gaps = 34/185 (18%)

Query: 195 KRSTPMEPGWESPW-GRGRPGW----------HIECSAMSSHYL-GKVFDIHGGGLDLIF 242
           K +      ++  + G G P            HIE  +M   +L     D+   G DL+ 
Sbjct: 557 KAAKLGVDVFDYVFLGLGDPRQLAEKYGIGQEHIE--SMRREFLYWYGVDLRVSGKDLVA 614

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
            H    +                  NG + +EG KMSKS GNF+T+ + L          
Sbjct: 615 NHLTFYLFHHTGIFEERHWPRGVAVNGMITIEGNKMSKSRGNFVTLKQALARHG------ 668

Query: 303 PAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAV 351
            +   RLA+L++   E +   D+  +   EA   +  +         + S   G  D  +
Sbjct: 669 -SDATRLALLLSA--EDLDDPDWRDKAAEEAGAFVKNFLSIVEKIAKEASDDVGPCDEWL 725

Query: 352 LSALY 356
           L+A  
Sbjct: 726 LAATD 730


>gi|325679007|ref|ZP_08158605.1| arginine--tRNA ligase [Ruminococcus albus 8]
 gi|324109511|gb|EGC03729.1| arginine--tRNA ligase [Ruminococcus albus 8]
          Length = 589

 Score = 56.4 bits (135), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 81/446 (18%), Positives = 136/446 (30%), Gaps = 101/446 (22%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           R + EF + +P+       GP      HIGNAR   + D L  ++ Y   E    +  N 
Sbjct: 128 RALVEFVSANPT-------GP-----MHIGNARGGAIGDCLAAVMEYAGYEVEREFYIN- 174

Query: 73  TDIDDKIIE-----RARQEHPSIPINDAISI----ITSKNTQQFVKDTTR---------- 113
            D  ++I +     R R          AI      + +   + + +D  R          
Sbjct: 175 -DAGNQIEKFGKSLRLRYMQICSEAGQAIVAKNLDLDAFCKEIYGEDGNRPEFPMPDDVY 233

Query: 114 LACLAPTHQPRATNHIPQ--MIY-------------------LIQNIILHGHAYEANNEI 152
           L          A N   +  MI                     IQ +      Y    + 
Sbjct: 234 LGM---DIIAHAKNFFDEYGMIASAQPEEDCKKALVDYALPKNIQGLHDDLAKYRIEYDT 290

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR-- 210
            F  S++ N GS + + I++ K      E+          LW ++T      +    R  
Sbjct: 291 WFRESTLHNDGSVA-KVIEQLKASGYTYEQDG-------ALWFKTTEFGDEKDRVLVRDN 342

Query: 211 GRPGWHIECSA-----MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           G P + +   A     ++     K  DI G       P  +   A +      +K   + 
Sbjct: 343 GIPTYFVPDIAYHYNKLAERKFDKAIDIFGADHHGYIPRLK--AAMTALGVDAKKLDIVI 400

Query: 266 IHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +    L   G   K+SK +G  IT+N LLE         P    R    +       DF 
Sbjct: 401 MQMVRLVKNGETYKLSKRSGKAITLNTLLE-------EIPIDAARFFFNLREPNSQFDFD 453

Query: 324 VQR------------LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI------ 365
           +              +  A   +    +    +G+   A    +   LNT   +      
Sbjct: 454 LDLAISNSSQNPVYYVQYAHARICSVIKKLKEEGVEAKAFTDEMAEALNTSEELELVKLM 513

Query: 366 QALHKLARESTKNHDLLPIFNASAHI 391
             L     ++ K +D   +   +  I
Sbjct: 514 ATLPTTINDAAKAYDPAKVTKYAVDI 539


>gi|157828900|ref|YP_001495142.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933624|ref|YP_001650413.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|157801381|gb|ABV76634.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908711|gb|ABY73007.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 508

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI----QNIILHGHAYEANN 150
                T + ++ F    T +         R T H  +    +    Q ++ +G  YE   
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDF-IRTTEH--RHKEAVAVFWQKLLDNGTIYEGFY 122

Query: 151 EIIFDTS 157
           E  +   
Sbjct: 123 EGWYAVR 129


>gi|289423990|ref|ZP_06425779.1| leucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289155565|gb|EFD04241.1| leucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 806

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 39/183 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +   +       +E   N+ +  G + ++G KMSKS G
Sbjct: 514 PVDQYIGGVEHAILHLLYARWFTKAFNKMGMTKHVEPFKNL-LTQGMVLMDGSKMSKSKG 572

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  E++E        + A   RL +L        ++++ Q +      L++  +   
Sbjct: 573 NIVSPVEMVE-------KYGADTARLFILFAAPPERDLEWSEQGVEGCFKFLNRVFRVVD 625

Query: 343 SKGII-------------DPAVLSA-----------LYNDLNTVSAIQALHKLARESTKN 378
               I             D A+ +            L +     +AI AL +L  +  K 
Sbjct: 626 ELADIAKVNHEFGELTKEDKAMRAKTNSTLKKVSEDLSDKFGFNTAIAALMELINDLYKY 685

Query: 379 HDL 381
            +L
Sbjct: 686 KEL 688


>gi|15892969|ref|NP_360683.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|25009381|sp|Q92GS6|SYM_RICCN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15620165|gb|AAL03584.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 508

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEI 152
                T + ++ F    T +         R T H  +    +  Q ++ +G  YE   E 
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDF-IRTTEHRHKKAVAVFWQKLLDNGTIYEGFYEG 124

Query: 153 IFDTS 157
            +   
Sbjct: 125 WYAVR 129


>gi|17554638|ref|NP_497837.1| Leucyl tRNA Synthetase family member (lrs-1) [Caenorhabditis
           elegans]
 gi|6226710|sp|Q09996|SYLC_CAEEL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3874391|emb|CAA86751.1| C. elegans protein R74.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
 gi|3879166|emb|CAA85280.1| C. elegans protein R74.1, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 1186

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 64/228 (28%), Gaps = 68/228 (29%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG L L   KMSKS GNF
Sbjct: 669 PIDMRASGKDLIGNHLTYLLFNHAAIW--PTDTSKWPKGIRANGHLLLNNEKMSKSTGNF 726

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           +T+ E +E                            F+   +        +        G
Sbjct: 727 MTLEEAIEK---------------------------FSADGM--------RLSLADAGDG 751

Query: 346 IIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           + D   + A+ +     +AI  L    +  +E  +  D   +    A        K+  +
Sbjct: 752 LEDANFVYAMAD-----AAILRLFTMIEWIKEMIEQRD-AGLLRKDA--------KKFAD 797

Query: 403 KNISIAIEKLVQERLILLKMKKFSSA--------DYIRKQLES--KGF 440
           +  +  +  L+       +   F  A          IR        G 
Sbjct: 798 RVFANEMNSLIAATEQNYEATNFKDALKTGFFEYQAIRDTYRELCAGI 845


>gi|154150363|ref|YP_001403981.1| methionyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|187647736|sp|A7I6H7|SYM_METB6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|153998915|gb|ABS55338.1| methionyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 662

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 28/173 (16%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      H+G+ R  +  D   R +R    E  V +V    +    I+  A ++  
Sbjct: 9   TCGLPYTNGPCHLGHLRTYVPADCYVRYMRRTGEE--VVFVSGSDNHGTPIVVSAEEQ-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAP----THQPRATNHIPQMIYLIQNIILHGH 144
                     ++ +  + F +   R+         T  P   +    +   +Q ++ +G+
Sbjct: 65  ----GTTPRALSEQYHRHFDETFRRMGVSFDHFGMTDDPACHHRTQDI---VQRLVDNGY 117

Query: 145 AY-EANNEIIFD----------TSSIPNY-GSFSRRKIDEQKMGTRVPEKYHK 185
            Y +  N+                 I  Y G  +R    +Q  G  +     K
Sbjct: 118 VYKQVVNQAYCPKCKRFLPDRYVEGICPYCGKQARGDECDQGCGKHLEPGEIK 170


>gi|238651000|ref|YP_002916856.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|238625098|gb|ACR47804.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 508

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI----QNIILHGHAYEANN 150
                T + ++ F    T +         R T H  +    +    Q ++ +G  YE   
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDF-IRTTEH--RHKEAVAVFWQKLLDNGTIYEGFY 122

Query: 151 EIIFDTS 157
           E  +   
Sbjct: 123 EGWYAVR 129


>gi|282850252|ref|ZP_06259631.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282579745|gb|EFB85149.1| leucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 822

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 31/149 (20%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  EG KMSKS GN ++  E++ T       + A   RL +L        +D++ 
Sbjct: 571 LTQGMVLKEGSKMSKSKGNVVSPEEIINT-------YGADTARLFILFAAPVDRDLDWSD 623

Query: 325 QRLTEAEILLSKWPQTSTSKGI-----------------------IDPAVLSALYNDLNT 361
           Q +  +   L +  +   +                          +   V   L N+ N 
Sbjct: 624 QGVEGSYRFLGRVWRIVDAYNEEAKKNVTGDLIKDEFGLRRELHRVIKKVTEDLDNNFNF 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAH 390
            +AI A+ +L      + D     N++  
Sbjct: 684 NTAISAIMELVNAMYAHKDKAEKINSALA 712


>gi|34556624|ref|NP_906439.1| isoleucyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833215|sp|Q7MAL0|SYI_WOLSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34482338|emb|CAE09339.1| ISOLEUCYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 915

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 17/142 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +      +I  H   ++ +G KMSKS GN I   ++L       + + + ++RL +
Sbjct: 584 SCAINHHAPYQSILTHGFTVDEKGEKMSKSKGNVIAPKDVL-------KEFGSEILRLWV 636

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
             + Y+  +  +   L +      K   T           L A  NDL  +S ++ L ++
Sbjct: 637 ASSDYQSDLKISQNILKQVAENYRKIRNTIR--------FLLANTNDLERLSPLEDLSEI 688

Query: 372 ARESTKNHDLLPIFNASAHILG 393
            R   +   +      +  + G
Sbjct: 689 DRWFMQEARVA--LEETNALFG 708


>gi|325973370|ref|YP_004250434.1| valyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651972|gb|ADX98054.1| valyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 833

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 8/90 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D++FP     I  S   +      NI++H    N +G KMSKS GN I   EL    
Sbjct: 441 SGKDILFPWISRMIYLSLHFNAKPPFKNIFLHGILRNSKGEKMSKSLGNGILPEELYS-- 498

Query: 296 KFGGRSWPAPVIRLAMLM-THYREPIDFTV 324
                 + + VIR A L  TH+   I ++ 
Sbjct: 499 -----KYSSDVIRFAFLSNTHFDRDIKYSE 523


>gi|229587041|ref|YP_002845542.1| methionyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|228022091|gb|ACP53799.1| Methionyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 508

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 46/127 (36%), Gaps = 15/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI----QNIILHGHAYEANN 150
                T + ++ F    T +         R T H  +    +    Q ++ +G  YE   
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDF-IRTTEH--RHKEAVAVFWQKLLDNGTIYEGFY 122

Query: 151 EIIFDTS 157
           E  +   
Sbjct: 123 EGWYAVR 129


>gi|288941693|ref|YP_003443933.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288897065|gb|ADC62901.1| isoleucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 942

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 11/104 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN ++  ++++T         A +IRL +
Sbjct: 582 SVAMHGRAPYRQVLTHGFTVDAKGEKMSKSKGNVVSPQDVMKTLG-------ADIIRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAV 351
             T YR  +  + + L        +   T+     +    DPAV
Sbjct: 635 AATDYRSEMSVSDEILKRTADAYRRIRNTARFLLANLEGFDPAV 678


>gi|283957174|ref|ZP_06374638.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791350|gb|EFC30155.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 628

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 97/349 (27%), Gaps = 77/349 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI------------PNYGSFSRRKIDEQ---KMGTRVPEKYHKKNPADFILWK 195
                  S             P+ G  +R   +E    K+     +        D IL K
Sbjct: 122 HYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPK 181

Query: 196 RSTPMEPGW-------------ESPWGRGRPG-----------WHIECSAMSSHYLGKVF 231
                   +                WG   P            W        S       
Sbjct: 182 NKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYIS-----SL 236

Query: 232 DIHGGGLDLIF-PHHENEIAQSCCADRIEKTANIWIHN-----------GFLNLEGRKMS 279
           D    G +  F P H + + +              +             G+   EG KMS
Sbjct: 237 DFQSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           KS GN +   E+++       ++ +   R  +L    +    DF+   L
Sbjct: 297 KSKGNVVKPKEIVD-------AYGSEAFRYFLLREVPFGNDGDFSENML 338


>gi|87119373|ref|ZP_01075271.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86165764|gb|EAQ67031.1| leucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 818

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 64/177 (36%), Gaps = 46/177 (25%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
              E    + +  G +N +G KMSKS GN +   E++E        + A  +RL ++   
Sbjct: 557 TSNEPFKRL-LTQGMVNKDGTKMSKSKGNTVDPQEMIE-------KYGADTVRLFIMFTA 608

Query: 315 HYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIID---------------PAVLS 353
              + +++    +  +   L +          + + G +D                  ++
Sbjct: 609 PPEQSLEWNDAGVDGSSRFLRRLWALAYRHNNAGTVGKLDTSKLTSDQKALRRKTHETIA 668

Query: 354 ALYND------LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
            + +D       NT  AI AL +L  E +K  D           LG+ V +E L   
Sbjct: 669 KVTDDIERRQTFNT--AIAALMELCNEISKYEDKSE--------LGLAVEQEALEAA 715


>gi|298204804|emb|CBI25637.3| unnamed protein product [Vitis vinifera]
          Length = 85

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
           ++  K G RV     K+NPA+F+LWK   P E   ++PW    PG H+E
Sbjct: 24  LENNKAGERVDVDSRKRNPAEFVLWKNVRPGESSQDNPWDFKIPGRHVE 72


>gi|220932174|ref|YP_002509082.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782501|sp|B8CXR8|SYL_HALOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219993484|gb|ACL70087.1| Leucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 830

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 57/140 (40%), Gaps = 17/140 (12%)

Query: 230 VFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H          I      D +E   N W+  G +  +G KMSKS G
Sbjct: 533 PVDQYIGGIEHAILHLLYARFFTKVIYDMDMIDSVEPFTN-WLAQGMVLKDGAKMSKSKG 591

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +   ++L+        + A   RL +L      + ++++ + +  AE  L++ W   +
Sbjct: 592 NVVDPEDILDR-------FGADTARLFILFAAPPEKDLEWSDRGVEGAERFLNRVWRLVA 644

Query: 342 TSKGIIDPAVLSALY-NDLN 360
            +   I     ++L  N  N
Sbjct: 645 DNIKEIKNTDQASLDVNSFN 664



 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 32/124 (25%), Gaps = 12/124 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A +       
Sbjct: 42  PYPSGNLHMGHVRVYSIGDVIARFKRMNGYN--VLHPMGWDAFGLPAENAAIKHG----- 94

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
           N      T  N +   K    L  L+       T          Q     +   G AY+ 
Sbjct: 95  NIHPQDWTWDNIKNMKKQMKSLG-LSYDWDREVTTAKEDYYKWTQWFFVKMFKKGLAYKK 153

Query: 149 NNEI 152
              +
Sbjct: 154 KAAV 157


>gi|288930704|ref|YP_003434764.1| leucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288892952|gb|ADC64489.1| leucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 929

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 13/164 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         +        NG+++LEG+KMSKS G  +T+ 
Sbjct: 580 PVDLRSSGKDLVANHLLFYLFHHVALFPEKYWPRAIAVNGYVSLEGQKMSKSKGPLLTMK 639

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E        + A V RL +L    Y    D+  + +      L ++ +      + +
Sbjct: 640 KAVE-------EFGADVTRLYILHAAEYDSDADWRRKDVEGLASNLRRFYEIVKENYLKE 692

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           P  ++ L   L     +  + K  +E+    + L    A     
Sbjct: 693 PEEMTTLDKWL-----VSRMQKAIKETRDAMEKLQTRRAVNAAF 731


>gi|268679313|ref|YP_003303744.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617344|gb|ACZ11709.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 642

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 63/356 (17%), Positives = 100/356 (28%), Gaps = 86/356 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D + R  R    E   T+    TD         + E  +     
Sbjct: 14  VNDVPHIGHAYTTIIADTMARYYRLKGYE---TFFLTGTD-----EHGQKIEEAAKSRGK 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F                R T   H   +    Q +   G  Y+   E 
Sbjct: 66  TPQAYADEISGKFRALWDEFEISY-DKFIRTTDAEHKAGVQKAFQVMFDKGDIYKGEYEG 124

Query: 153 IFDTS--------------SIPNYGSFSRRKIDEQKMG--TRVPEKYHKKNPAD--FILW 194
            +  S                P+ G  +R   +E      ++  E   K   +D   +L 
Sbjct: 125 HYCVSCETFFTDTQLVDEDKCPDCGKLTRLVKEESYFFKLSKYQEDLIKWYNSDEKCVLP 184

Query: 195 KRSTPMEPGW-------------ESPWGRGRPGWHIECSAMSSHY--------------- 226
           K        +                WG   P      S     +               
Sbjct: 185 KGKKNEVISFVKQGLRDLSITRTSFDWGVKLPS-----SMNDDKHVMYVWLDALLNYTTA 239

Query: 227 LGKVFD----------IHGGGLDLIFPHHENEIA--QSCCADRIEKTANIWIHNGFLNLE 274
           LG   D          +H  G D++  H     A   S      +  A      G+    
Sbjct: 240 LGYGGDEKNMEFWPATMHLVGKDILRFHAIYWPAFLMSLGLALPKHVAAH----GWWTRN 295

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           G KMSKS GN +   E+ +       ++     R  ML    + +  DF+ + L +
Sbjct: 296 GEKMSKSKGNVVNPKEVAD-------AYGLENFRYFMLREVPFGQDGDFSQKALMD 344


>gi|312144034|ref|YP_003995480.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904685|gb|ADQ15126.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 831

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 62/144 (43%), Gaps = 26/144 (18%)

Query: 230 VFDIHGGGLDLIFPH-----------HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
             D + GG++    H           H+  +A++     +E   N W+  G +  +G KM
Sbjct: 533 PVDQYIGGIEHAILHLLYSRFFTKVVHDMGMAEA-----VEPFTN-WLAQGMVLKDGAKM 586

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK- 336
           SKS GN +   ++LE        + A   RL +L  +   + ++++ + +  A   L++ 
Sbjct: 587 SKSKGNVVDPKDILE-------EYGADTARLFILFASPPEKDLEWSNKGVEGANRFLNRV 639

Query: 337 WPQTSTSKGIIDPAVLSALYNDLN 360
           W   + +  II       + ++L+
Sbjct: 640 WRYITENIEIIRSGEGEVIADELD 663



 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 35/137 (25%), Gaps = 14/137 (10%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP     YV    P      H+G+ R   + DV+ R  R       V +           
Sbjct: 29  DPDKENYYVLEMFPYPSGNLHMGHVRVYSIGDVVARYKRMEGYN--VLHPMGWDAFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A +       N      T +N     +    +  L+       T          Q  
Sbjct: 87  ENAAIKHG-----NIHPKEWTWQNIAHMKEQMKAMG-LSYDWDREVTTASKDYYKWTQWF 140

Query: 138 --NIILHGHAYEANNEI 152
              +     AY   + +
Sbjct: 141 FAKMFERDLAYRKESTV 157


>gi|149912581|ref|ZP_01901115.1| isoleucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149812987|gb|EDM72813.1| isoleucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 968

 Score = 56.0 bits (134), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 57/179 (31%), Gaps = 16/179 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   E++       + + A ++RL 
Sbjct: 622 QACGTIGRAPYRGVLTHGFTLDEKGNKMSKSLGNTVAPEEVV-------KQYGADILRLW 674

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL-NTVSA----- 364
           +  + Y   +    + L        +   T             A   DL +         
Sbjct: 675 VAQSDYTADLRIGPEILKGVADGYRRLRNTMRFMLGALAHFDEADRTDLQDMPELERWVL 734

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLILL 420
             +  L ++ R+    +D   +F    +   +E+   + +        +     R    
Sbjct: 735 HRLAELDEVVRKGYDAYDFQGVFQQLFNFATVELSAFYFDIRKDALYCDGDTARRRAAR 793


>gi|86152046|ref|ZP_01070258.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124355|ref|YP_004066359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85840831|gb|EAQ58081.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018077|gb|ADT66170.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 628

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 97/349 (27%), Gaps = 77/349 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI------------PNYGSFSRRKIDEQ---KMGTRVPEKYHKKNPADFILWK 195
                  S             P+ G  +R   +E    K+     +        D IL K
Sbjct: 122 HYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPK 181

Query: 196 RSTPMEPGW-------------ESPWGRGRPG-----------WHIECSAMSSHYLGKVF 231
                   +                WG   P            W        S       
Sbjct: 182 NKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYIS-----SL 236

Query: 232 DIHGGGLDLIF-PHHENEIAQSCCADRIEKTANIWIHN-----------GFLNLEGRKMS 279
           D    G +  F P H + + +              +             G+   EG KMS
Sbjct: 237 DFQSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           KS GN +   E+++       ++ +   R  +L    +    DF+   L
Sbjct: 297 KSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENML 338


>gi|296134000|ref|YP_003641247.1| leucyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032578|gb|ADG83346.1| leucyl-tRNA synthetase [Thermincola potens JR]
          Length = 822

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 66/180 (36%), Gaps = 40/180 (22%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHY 316
            E   N+ +  G +  +G KMSKS GN ++  E++         + A   RL +L     
Sbjct: 563 EEPFTNL-LTQGMVLKDGAKMSKSKGNVVSPEEIVA-------KYGADTARLFILFAAPP 614

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALY------------------ 356
              ++++ Q +  A   L++  +   +   G+ D A +  +                   
Sbjct: 615 ERDLEWSDQGVEGAFRFLNRVWRLVYNYVSGLDDTAHVEEMSPADREMRRITHVTIKRVT 674

Query: 357 ND----LNTVSAIQALHKLA------RESTKNHDLLPIFNASAH-ILGIEVCKEHLNKNI 405
           +D     N  +AI A+ ++       R+  +  +      A    +L +     H+ + +
Sbjct: 675 DDISQRFNFNTAISAIMEMVNALYQYRDKNEKRNSAVEAEAMNSLVLLLAPFAPHIAEEL 734


>gi|254490598|ref|ZP_05103784.1| leucyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224464342|gb|EEF80605.1| leucyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 818

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 38/163 (23%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
              E   N+ +  G +  +G KMSKS GN +    L++        + A   RL M+   
Sbjct: 556 SGDEPFKNL-LTQGMVLKDGAKMSKSKGNTVDPQALID-------QYGADTARLFMMFAA 607

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYN---D---------- 358
                ++++ + +  +   L +  +       KG  +    +AL +   D          
Sbjct: 608 PPEMSLEWSDKAVEGSNRFLRRLWRAVVEHAEKGSTEKLDTAALSDALLDLRRQTHQTLT 667

Query: 359 -----------LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
                       NT  AI A+ +L    TKN D  P   A   
Sbjct: 668 KVSDDIGRRHTFNT--AIAAVMELMNAITKNADDSPQGRAVMQ 708


>gi|121612346|ref|YP_001000523.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005457|ref|ZP_02271215.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249443|gb|EAQ72403.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 628

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 97/349 (27%), Gaps = 77/349 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI------------PNYGSFSRRKIDEQ---KMGTRVPEKYHKKNPADFILWK 195
                  S             P+ G  +R   +E    K+     +        D IL K
Sbjct: 122 HYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPK 181

Query: 196 RSTPMEPGW-------------ESPWGRGRPG-----------WHIECSAMSSHYLGKVF 231
                   +                WG   P            W        S       
Sbjct: 182 NKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYIS-----SL 236

Query: 232 DIHGGGLDLIF-PHHENEIAQSCCADRIEKTANIWIHN-----------GFLNLEGRKMS 279
           D    G +  F P H + + +              +             G+   EG KMS
Sbjct: 237 DFQSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPEFIGAHGWWTKEGEKMS 296

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           KS GN +   E+++       ++ +   R  +L    +    DF+   L
Sbjct: 297 KSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENML 338


>gi|145606256|ref|XP_365730.2| hypothetical protein MGG_02432 [Magnaporthe oryzae 70-15]
 gi|145013967|gb|EDJ98608.1| hypothetical protein MGG_02432 [Magnaporthe oryzae 70-15]
          Length = 1106

 Score = 55.6 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         E     +  NG L + G KMSKS GNF+T++
Sbjct: 691 PLDLRVSGKDLIGNHLTFAIYCHIALFPREYWPKSFRVNGHLMMNGEKMSKSTGNFMTLD 750

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           E         R + A  +R+A+
Sbjct: 751 EA-------TRKYGADALRMAI 765


>gi|86153308|ref|ZP_01071512.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843034|gb|EAQ60245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 628

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 97/349 (27%), Gaps = 77/349 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDDFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI------------PNYGSFSRRKIDEQ---KMGTRVPEKYHKKNPADFILWK 195
                  S             P+ G  +R   +E    K+     +        D IL K
Sbjct: 122 HYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPK 181

Query: 196 RSTPMEPGW-------------ESPWGRGRPG-----------WHIECSAMSSHYLGKVF 231
                   +                WG   P            W        S       
Sbjct: 182 NKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYIS-----SL 236

Query: 232 DIHGGGLDLIF-PHHENEIAQSCCADRIEKTANIWIHN-----------GFLNLEGRKMS 279
           D    G +  F P H + + +              +             G+   EG KMS
Sbjct: 237 DFQSKGENAKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           KS GN +   E+++       ++ +   R  +L    +    DF+   L
Sbjct: 297 KSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENML 338


>gi|242077560|ref|XP_002448716.1| hypothetical protein SORBIDRAFT_06g031980 [Sorghum bicolor]
 gi|241939899|gb|EES13044.1| hypothetical protein SORBIDRAFT_06g031980 [Sorghum bicolor]
          Length = 1090

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMSKS GNF+T+ 
Sbjct: 671 PFDIRVSGKDLIQNHLTFCIYNHTALLPEHHWPLGFRCNGHLMLNSEKMSKSTGNFLTLE 730

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +       + + +   R A+
Sbjct: 731 DAI-------KKYSSDATRFAL 745


>gi|34581336|ref|ZP_00142816.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262721|gb|EAA26225.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 508

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 44/118 (37%), Gaps = 15/118 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI----QNIILHGHAYEA 148
                T + ++ F    T +         R T H  +    +    Q ++ +G  YE 
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDF-IRTTEH--RHKEAVAVFWQKLLDNGTIYEG 120


>gi|195952737|ref|YP_002121027.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932349|gb|ACG57049.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 493

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/331 (18%), Positives = 98/331 (29%), Gaps = 76/331 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D + R  R    +    +    TD     +++A +E        
Sbjct: 12  VNDVPHIGHAYTTIAADTIARYKRQKGFD---VFFLTGTDEHGLKLQKAAEEK-----GM 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  KN + F      L      H  R T+  H   +  +I  +   G  Y+   E 
Sbjct: 64  TPKELCDKNFENFKNLWDFLKISY-DHIIRTTDDYHKAYVQEVITKVYERGDIYKGYYEG 122

Query: 153 IFDTS----------SIPNYG------------------SFSRR--KIDEQKMGTRVPEK 182
            +                +Y                     S+   K+ E      +   
Sbjct: 123 YYCVGCEEFKPESEIKDFDYSCPIHKKKCELIKEETYFFKLSKYQDKLLELYETDFIKPD 182

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF----------- 231
           Y K+    F+                 + R  W IE     +H +   F           
Sbjct: 183 YRKEEVIAFV-----RQGLKDLSITRPKERVSWGIELPFDKNHVIYVWFDALFNYISALK 237

Query: 232 ----------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                     D H  G D++  H     A     D      +++ H G+  +EG+KMSKS
Sbjct: 238 FKNKLEFWPADFHIVGKDILRFHAVYWPAFLMSLDMELP-KHVYAH-GWWTVEGQKMSKS 295

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAML 312
            GN I   +++         +     R  +L
Sbjct: 296 LGNVINPYDVVN-------EYGLDETRYFLL 319


>gi|50289171|ref|XP_447015.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49526324|emb|CAG59948.1| unnamed protein product [Candida glabrata]
          Length = 907

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/186 (16%), Positives = 54/186 (29%), Gaps = 33/186 (17%)

Query: 16  TEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
             F  I  +    MY+     Y     H+G+ R  ++ D L R  +              
Sbjct: 57  VPFIPIKENDKRDMYILSMFPYPSGMLHMGHLRVYVISDTLNRFYQQRGY---------- 106

Query: 73  TDIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVK---DTTRLACLAPTHQPRAT 126
            ++   +   A     E+ +I      S  T +N ++  +   D           +   T
Sbjct: 107 -NVIHPMGWDAFGLPAENAAIERGIDPSEWTKQNIKKMKEQMNDMLA----NFNWEREVT 161

Query: 127 NHIPQMIYLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
              P+     Q     +  +G AY  + EI              +  ++D      R   
Sbjct: 162 TCDPEYYKFTQWLFLQLYKNGLAYRKDAEINWDPVDKT----VLANEQVDANGRSWRSGA 217

Query: 182 KYHKKN 187
              KK 
Sbjct: 218 IVEKKK 223


>gi|332992323|gb|AEF02378.1| isoleucyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 939

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   E+            A ++RL +
Sbjct: 580 STAMHGHAPYKEVLTHGFTVDAHGRKMSKSVGNVVAPQEVTNKLG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL--SALYND----LN---TV 362
             T YR  I  + + L  A     +   TS          +   AL  D    L+     
Sbjct: 633 ASTDYRGEIAVSDEILKRAADAYRRLRNTSRFLLANLNGFVPEDALPEDEMVALDRWIVA 692

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
            A +AL +   E+ + +DLL +     H   IE+   +L+
Sbjct: 693 RA-KALQEELVEAFEKYDLLVVTQKLMHFCSIELGSFYLD 731


>gi|302755993|ref|XP_002961420.1| hypothetical protein SELMODRAFT_77212 [Selaginella moellendorffii]
 gi|300170079|gb|EFJ36680.1| hypothetical protein SELMODRAFT_77212 [Selaginella moellendorffii]
          Length = 1096

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI 
Sbjct: 669 PFDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIR 728

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +         + A   R  +
Sbjct: 729 DAVSD-------FSADATRFGL 743


>gi|302817213|ref|XP_002990283.1| hypothetical protein SELMODRAFT_131311 [Selaginella moellendorffii]
 gi|300141992|gb|EFJ08698.1| hypothetical protein SELMODRAFT_131311 [Selaginella moellendorffii]
          Length = 1093

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI 
Sbjct: 666 PFDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIR 725

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +         + A   R  +
Sbjct: 726 DAVSD-------FSADATRFGL 740


>gi|242036051|ref|XP_002465420.1| hypothetical protein SORBIDRAFT_01g038510 [Sorghum bicolor]
 gi|241919274|gb|EER92418.1| hypothetical protein SORBIDRAFT_01g038510 [Sorghum bicolor]
          Length = 1090

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMSKS GNF+T+ 
Sbjct: 671 PFDIRVSGKDLIQNHLTFCIYNHTALLPEHHWPLGFRCNGHLMLNSEKMSKSTGNFLTLE 730

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +       + + +   R A+
Sbjct: 731 DAI-------KKYSSDATRFAL 745


>gi|256828301|ref|YP_003157029.1| isoleucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577477|gb|ACU88613.1| isoleucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 936

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 74/219 (33%), Gaps = 37/219 (16%)

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           +I L+      G AY   +                  +    +++         K    +
Sbjct: 471 IIALLCKDC--GDAYFDGDWAHSIVDRFATHPTGADYWFEAPLEDVVPSGLTCPKCGGTH 528

Query: 188 PADFILW-KRSTPMEPGWESPWG-----RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
                 W K    ++  ++S         GRP    ECS  +  YL    D H G     
Sbjct: 529 ------WEKEDDILDVWFDSGTSFAAVVEGRP----ECSFPADLYLEGT-DQHRGWF--- 574

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
              H + +A S     +     +  H   L+ +GRKMSKS GN +   E++E        
Sbjct: 575 ---HSSLLA-SMGTRGVPPYRTVLTHGFVLDGQGRKMSKSIGNVVAPQEIIEKHG----- 625

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             A V+RL +   +Y+E +  + + L        K   T
Sbjct: 626 --AEVLRLWVASENYQEDLRISDEILRRLVDAYRKIRNT 662


>gi|302773323|ref|XP_002970079.1| hypothetical protein SELMODRAFT_410808 [Selaginella moellendorffii]
 gi|300162590|gb|EFJ29203.1| hypothetical protein SELMODRAFT_410808 [Selaginella moellendorffii]
          Length = 1108

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I         E+    +  NGFL L G KM+KS GNF+TI 
Sbjct: 677 PFDLRVSGKDLIQNHLTFSIYNHTAMFPEERWPRSFRCNGFLLLNGEKMAKSTGNFLTIR 736

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +         + A   R  +
Sbjct: 737 DAVND-------FSADATRFGL 751


>gi|157827625|ref|YP_001496689.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|157802929|gb|ABV79652.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 509

 Score = 55.6 bits (133), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    E     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVPHIGHAYTSVASDVIARFMRLSGHE-----VMFLTGTDEH---GQKVEKAAIDKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + +Q F    T +         R T   H   +    Q ++ +G  YE   E 
Sbjct: 66  DPQKFTDQTSQSFRHLMTAMHISNDDF-IRTTEERHKKAVAIFWQKLLDNGSIYEGFYEG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYAVRDEAFY 134


>gi|91205053|ref|YP_537408.1| methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123388147|sp|Q1RJZ5|SYM_RICBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91068597|gb|ABE04319.1| Methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 509

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    E     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVPHIGHAYTSVASDVIARFMRLSGHE-----VMFLTGTDEH---GQKVEKAAIDKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + +Q F    T +         R T   H   +    Q ++ +G  YE   E 
Sbjct: 66  DPQKFTDQTSQSFRHLMTAMHISNDDF-IRTTEERHKKAVAIFWQKLLDNGSIYEGFYEG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYAVRDEAFY 134


>gi|331013874|gb|EGH93930.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 81

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 7/55 (12%)

Query: 389 AHILGI------EVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLE 436
           A +LG+      +  +      +  A +E L+Q RL     K ++ +D IR Q+ 
Sbjct: 1   ASVLGVLQLEADDFLRAGAEGRVDAAQVEALIQARLAARAAKDWAESDRIRDQIT 55


>gi|326796280|ref|YP_004314100.1| leucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326547044|gb|ADZ92264.1| leucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 815

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 63/178 (35%), Gaps = 46/178 (25%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
              E    + +  G +N +G KMSKS GN +   E++E        + A  +RL M+   
Sbjct: 554 TSDEPFKRL-LTQGMVNKDGSKMSKSKGNTVDPQEMIE-------QYGADTVRLFMMFTA 605

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSAL---------------- 355
              + +++  + +  A   L +    S    + G      + AL                
Sbjct: 606 PPEQSLEWNDKGVDGASRFLRRLWSLSYQHLNAGDKVALDVDALSGEQKALRRKTHETIA 665

Query: 356 --YND------LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
              +D       NT  AI A+ +L  E +K  D            G+ V +E L   I
Sbjct: 666 KVSDDIERRQTFNT--AIAAVMELCNEISKFEDRSEQ--------GLAVEREALEAAI 713


>gi|51473863|ref|YP_067620.1| methionyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826289|sp|Q68W54|SYM_RICTY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|51460175|gb|AAU04138.1| MetRS [Rickettsia typhi str. Wilmington]
          Length = 507

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D +HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVSHIGHAYTSVASDVIARFMRCCGKD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K +Q F      +         R T   H   +    Q ++ +G  YE   E 
Sbjct: 66  DPQSFTDKTSQNFRDLMVAMNISNDDF-IRTTENRHKKAVAVFWQKLLDNGAIYEGFYEG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYSVRDEAFY 134


>gi|284162388|ref|YP_003401011.1| leucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012385|gb|ADB58338.1| leucyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 943

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 70/191 (36%), Gaps = 18/191 (9%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         +        NG+++LEG+KMSKS G  +T+ 
Sbjct: 591 PVDLRSSGKDLVANHLLFFLFHHVAIFPPKHWPRAIAVNGYVSLEGKKMSKSKGPLLTMK 650

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
             +           A V RL +L    Y    D+  + +   +  L ++ +        +
Sbjct: 651 RAVAENG-------ADVTRLYILYASEYDSDADWRSKEVEAMKRHLERFFELVKEHYTKE 703

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHIL-GIEVCKEHLNK 403
              +  L   L     I    K  +E+    + L     + +A   +L  I    +    
Sbjct: 704 IKEIDHLDRWL-----ISRFQKAVKETRDAMEKLQTRRAVNSAFFEVLNDIRWYLKRGGD 758

Query: 404 NISIAIEKLVQ 414
           N++I ++  ++
Sbjct: 759 NLAIILDDWIK 769


>gi|254459318|ref|ZP_05072739.1| isoleucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207083931|gb|EDZ61222.1| isoleucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 919

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 15/122 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +       +  H   ++ +G KMSKS GN I   ++L       + + + ++RL +
Sbjct: 585 SCAVEHKAPYKAVLTHGFTVDEKGEKMSKSKGNVIAPEKVL-------KEYGSEILRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
             + Y+  +  +   L +      K   T          ++ A  NDL T+SA + + +L
Sbjct: 638 ASSDYQGDLKISDGILKQTSENYRKLRNTFR--------IMLANINDLETISAYENMGEL 689

Query: 372 AR 373
            +
Sbjct: 690 DK 691


>gi|309792716|ref|ZP_07687167.1| hypothetical protein OSCT_3118 [Oscillochloris trichoides DG6]
 gi|308225265|gb|EFO79042.1| hypothetical protein OSCT_3118 [Oscillochloris trichoides DG6]
          Length = 342

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            I   + +LV +R      + +++AD +R Q+ + G+ + D    
Sbjct: 291 RIPPEVVELVAQRQAARTQRDWAAADRLRAQIVAAGWQVRDTPEG 335


>gi|78357482|ref|YP_388931.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123754859|sp|Q30YL0|SYL_DESDG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78219887|gb|ABB39236.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 829

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 39/202 (19%), Positives = 65/202 (32%), Gaps = 48/202 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEI----AQSCCADRI--EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H         A   C      E  AN+ +  G + ++G KMSKS G
Sbjct: 529 PVDQYIGGVEHAILHLLYARFFIKALRDCGYMDLDEPFANL-LTQGMVLMDGAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   E++         + A  +RL  L         D++   +  A   +++  +   
Sbjct: 588 NVVDPTEMISR-------YGADTVRLFCLFAAPPERDFDWSDSGIEGASRFVNRVWRLVE 640

Query: 343 S--KGIIDPAVLSALYND-----------------------------LNTVSAIQALHKL 371
               G+   A  S+  +D                              NT  AI A+ +L
Sbjct: 641 DLPAGMAPMAPCSSSSDDCTGAAAKDIRQKEHATVKKAGADIQNRFQFNT--AISAVMEL 698

Query: 372 ARESTKNHDLLPIFNASAHILG 393
                   D L        +LG
Sbjct: 699 VNALYLTRDELGADEKGRRVLG 720


>gi|315585949|gb|ADU40330.1| leucine--tRNA ligase [Helicobacter pylori 35A]
          Length = 806

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 51/136 (37%), Gaps = 22/136 (16%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTST--SKGIIDPAVLSALYNDLNTV---------SAIQALHKLAREST 376
             A   + +    ++  +     P    A    LN            A++ LH++  ++ 
Sbjct: 617 EGAHRFIKRLYDKASVINPTTSKPEFKEA---SLNEAEKLGRKKVYEALKKLHEIFNKAE 673

Query: 377 KNHDLLPIFNASAHIL 392
             +    +  +    L
Sbjct: 674 SAYAFNTLIASCMEAL 689



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALVRYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGVH------PKTWTYENIEAMQKEFETLG 112


>gi|308802762|ref|XP_003078694.1| putative leucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116057147|emb|CAL51574.1| putative leucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1086

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 52/149 (34%), Gaps = 34/149 (22%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            FD+   G DLI  H      N  A        +     +  NG L L   KMSKS GNF
Sbjct: 677 PFDLRVSGKDLIQNHLSFAIYNHTAIWE---DKKMWPRAFRTNGHLLLNNEKMSKSTGNF 733

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSK---WPQ 339
            T+ + +E        + A  +R ++      + +   +F       A + L+K   W +
Sbjct: 734 KTLKQAIE-------EFSADAMRFSLADAG--DTVEDANFVEDTANAAILRLTKEIAWYE 784

Query: 340 TSTSK------------GIIDPAVLSALY 356
              +               ID    +A+ 
Sbjct: 785 EQNADIEADKLRKTAPNKFIDRVFANAMN 813


>gi|283954409|ref|ZP_06371929.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794026|gb|EFC32775.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 625

 Score = 55.2 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 98/335 (29%), Gaps = 80/335 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+  +       
Sbjct: 11  VNDMPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLRNF------ 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISSEFKKLWDEFEITY-DIYARTTDIRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI------------PNYGSFSRRKIDEQ---KMGTRVPEKYHKKNPADFILWK 195
                  S             P+ G  +R   +E    K+     +        D IL K
Sbjct: 122 HYCVSCESFFTQSQLINEYSCPDCGKQTRILKEESYFFKLSKYQDKILQWYQEKDPILPK 181

Query: 196 RSTPMEPGW-------------ESPWGRGRP-----GWHI-----------------ECS 220
                   +                WG   P       HI                 +C 
Sbjct: 182 NKKNELVNFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLDFQCK 241

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRK 277
             ++ +      +H  G D++  H     A    A  +            +G+   EG K
Sbjct: 242 GENAKFWPAH--VHLVGKDILRFH-----AIYWPAFLMSVDLPLPKFIGAHGWWTKEGEK 294

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           MSKS GN +   E+++       ++ +   R  +L
Sbjct: 295 MSKSKGNVVKPKEMVD-------AYGSEAFRYFLL 322


>gi|209964481|ref|YP_002297396.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
 gi|209957947|gb|ACI98583.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
          Length = 520

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 11/132 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R  R    +     V+ +T  D+      + +  +     
Sbjct: 16  VNDAPHIGHAYTTVACDVMARFKRLDGFD-----VKFLTGTDEH---GQKVQKSAELAGI 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N++ F +    L         R T   H+  +  L Q +   G  Y  +   
Sbjct: 68  TPKQMADRNSENFRELARLLNVSNDDF-IRTTEPRHVTAVQALWQRLQESGDVYLGSYSG 126

Query: 153 IFDTSSIPNYGS 164
            +       +G 
Sbjct: 127 WYSVRDEAYFGE 138



 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +E    ++ H G+  +EG KMSKS GN +   EL
Sbjct: 259 DLHMVGKDILRFHAVYWPAFLMAA-GLEPPRRVFAH-GWWTVEGEKMSKSLGNVVKPEEL 316

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           + T       +     R  ++
Sbjct: 317 IGT-------YGLDQTRYFLM 330


>gi|302389340|ref|YP_003825161.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199968|gb|ADL07538.1| leucyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 817

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 30/144 (20%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  AN+ +  G +  +G KMSKS GN ++  E++E        + A   RL +L  +   
Sbjct: 564 EPFANL-LTQGMVLKDGAKMSKSKGNIVSPEEIIE-------KYGADTARLFILFASPPE 615

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKG--IIDPAVLSALY---------------ND-- 358
           + ++++ Q +      L +  +     G  + DP     L                 D  
Sbjct: 616 KDLEWSDQGVEGCHRFLQRVWRLVEELGPRVKDPVADERLDREVRRLVHKTIKKVTEDIE 675

Query: 359 --LNTVSAIQALHKLARESTKNHD 380
              N  +AI A+ ++        +
Sbjct: 676 ERFNFNTAISAIMEMVNALNSRKE 699


>gi|257468429|ref|ZP_05632523.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317062695|ref|ZP_07927180.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688371|gb|EFS25206.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 641

 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 100/334 (29%), Gaps = 77/334 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T  D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVIARYKKTMGYDVFF-----LTGTDEH---GQKVEETAKQKGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T     +FV+    L     T   R T   H   +  +++ +  +G  Y+     
Sbjct: 66  TPQEWTDIMAPKFVEMWKALNIEY-TDFIRTTEPRHKEAVKKILKKVYENGDIYKGEYSG 124

Query: 153 IFDTS--------------SIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILW 194
            +  S                P+ G   R   +E         +     H  +  DFIL 
Sbjct: 125 KYCVSCETFVPENQIVNGNHCPDCGKELRVVKEESYFFKMSKYQDALLAHIDSHPDFILP 184

Query: 195 KRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLGK 229
           +        +            + +  G P      HI            +A+      +
Sbjct: 185 RSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENNPE 244

Query: 230 VFD--------IHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKM 278
           +FD        +H  G D++  H         C   +  ++   NI  H G+   EG KM
Sbjct: 245 LFDKFWTNGEVVHLLGKDIVRFH----AIIWPCMLLSAGVKLPDNIVAH-GWWTSEGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           SKS GN +             + +     R  +L
Sbjct: 300 SKSKGNVV-------DPVAETKKYGVDAFRYCLL 326


>gi|153952241|ref|YP_001398097.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939687|gb|ABS44428.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 628

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 63/352 (17%), Positives = 99/352 (28%), Gaps = 83/352 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDMPHLGHAYTTIIADTLARFYRLQGHE--TKFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAY--EA 148
                 +K + +F K    L         R TN +   I  ++     +   G  Y  E 
Sbjct: 63  TPQEYANKISFEFKKLWDELEISY-DIYARTTNTM--HIEFVKAMFLKMWQKGDIYKDEY 119

Query: 149 NNEIIFDTS------------SIPNYGSFSRRKIDEQKMGTRVPEKYHK----KNPADFI 192
                                S P+ G  +   + E+    R+ +   K        D I
Sbjct: 120 EGHYCISCESFFTQSQLINNCSCPDCGKNTTI-LKEESYFFRLSKYQDKILQWYEEKDPI 178

Query: 193 LWKRSTPMEPGW-------------ESPWGRGRPG-----------WHIECSAMSSHYLG 228
           L K        +                WG   P            W        S    
Sbjct: 179 LPKNKKNELINFVQSGLKDLSITRTSFDWGIKLPQEMNDPKHIIYVWLDALFIYIS---- 234

Query: 229 KVFDIHGGGLDLIF-PHHENEIAQSCCADRIEKTANIWIH-----------NGFLNLEGR 276
              D    G    F P H +   +              +            +G+   EG 
Sbjct: 235 -SLDFQSKGEKAKFWPAHVHLAGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGE 293

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           KMSKS GN +   E+++       ++ +   R  +L    +    DF+   L
Sbjct: 294 KMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENML 338


>gi|239948424|ref|ZP_04700177.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|241563440|ref|XP_002401705.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215501897|gb|EEC11391.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|239922700|gb|EER22724.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 508

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVPHIGHAYTSVASDVIARFMRLRSFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + ++ F    T +         R T   H   +    Q ++ +G  YE   E 
Sbjct: 66  DPQKFTDQTSESFRHLMTAMHISNDDF-IRTTENRHKEAVAVFWQKLLDNGTIYEGFYEG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYAVRDEAFY 134


>gi|160903062|ref|YP_001568643.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|189082329|sp|A9BI29|SYI_PETMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160360706|gb|ABX32320.1| isoleucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 919

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 64/173 (36%), Gaps = 20/173 (11%)

Query: 218 ECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           E  A S   L K   D++  G D      ++ I  S     I    ++  H    + EG+
Sbjct: 533 EAVANSREELKKFPVDLYLEGSDQHRGWFQSSIFLSVAKHGIAPYESVLTHGFIKDEEGK 592

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +   +++         + A ++RL +    YR  I  +   L +      K
Sbjct: 593 KMSKSLGNVVNPKDIIN-------KYGADILRLWVASADYRMDIKISYNILEQQVETYRK 645

Query: 337 WPQT----STSKGIIDP-----AVLSALYNDLNTVSAIQALHKLARESTKNHD 380
              T      +    DP     A    L  D     A+  LH L +  TK +D
Sbjct: 646 LRNTIRFLLGNINDFDPDEDSVAYEEMLEID---QWALMKLHNLIKNVTKAYD 695


>gi|260654931|ref|ZP_05860419.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630246|gb|EEX48440.1| isoleucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 918

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 24/156 (15%)

Query: 192 ILWKRSTPMEPGWESPWG-----RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
            L K +  ++  ++S        +GRP    E S  +  YL +  D H G         +
Sbjct: 524 ALSKGTDILDVWFDSGVSHFAVLKGRP----ELSWPADLYL-EGADQHRGWF-------Q 571

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
             +  S           +  H  F++ EGRKMSKS GN ++  +++E        + A +
Sbjct: 572 TSLLASVAVTGKSPYKAVLTHGFFMDGEGRKMSKSLGNVVSAQKIVE-------KYGADI 624

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +RL +  T YR  +  + + +        +   T+ 
Sbjct: 625 LRLWVASTDYRSDMRISYKIVDSLVESYRRIRNTAR 660


>gi|300709408|ref|YP_003735222.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123091|gb|ADJ13430.1| leucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 885

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 15/127 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A     +  E   N+ +  G + LEG KMSKS G
Sbjct: 522 PVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFRNL-LAQGMVQLEGEKMSKSKG 580

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++   ++E        + A   RL M+         D++ + +      L +  +T  
Sbjct: 581 NTVSPQRIVE-------EYGADTARLFMMQAAQPERDFDWSEEGVRSTNAFLGRLKETVE 633

Query: 343 SKGIIDP 349
           +    +P
Sbjct: 634 AFAENEP 640


>gi|90424203|ref|YP_532573.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
 gi|90106217|gb|ABD88254.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
          Length = 522

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   +V D + R  R    +     VR +T  D+  ++    +  +I        
Sbjct: 25  PHIGHAYTAMVSDAIARFQRLDGYD-----VRFLTGTDEHGLK---MQQTAIAEGLTPLQ 76

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           +  +N+ +F      L         R T    +     ++      A E N +I  D
Sbjct: 77  LADRNSARFRDMMAALNISYDD-YIRTTEPRHE-----RSCQALWTAIENNGDIYLD 127


>gi|284166921|ref|YP_003405200.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016576|gb|ADB62527.1| leucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 882

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 53/269 (19%), Positives = 91/269 (33%), Gaps = 63/269 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A     +  E   N+ +  G + LEG KMSKS G
Sbjct: 519 PVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFTNL-LAQGMVQLEGEKMSKSKG 577

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQ--- 339
           N ++   ++E        + A   RL M+         D++ + +      L++      
Sbjct: 578 NVVSPQRIVE-------EYGADTARLFMMQAAQPERDFDWSEEGVRSTNAFLARLKGMVE 630

Query: 340 --TSTSKGIIDPAVLSALY--------------NDLNTVSAIQALHKLARESTKNHD--- 380
              S      D AV S +               +DL    A++    L R   +  D   
Sbjct: 631 DYVSDEPAGDDDAVASYVDSEIDATIALATDEYDDLTFNKALRETQDLVRTLRQYADYTE 690

Query: 381 ---------LLPIFNASAHI---LGIEVCKEHLNKNI-------SIAIEK-LVQERLILL 420
                    L  +    A +   L  E+  E  N  +       +  +++  V +R  L+
Sbjct: 691 PHAETYERGLSAVVRLLAPVAPHLAEELWDELGNDGLVADASWPAAEVDRDHVTKRRRLV 750

Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPD 449
           +     + + IR  +E  G   ED K  D
Sbjct: 751 EN----TREDIRDIVEVAGI--EDPKAID 773


>gi|57167974|ref|ZP_00367113.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020348|gb|EAL57017.1| leucyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 810

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  A + +  G +  +G KMSKS GN +  ++++         + A   RL +L      
Sbjct: 563 EPFARL-LTQGMVLKDGAKMSKSKGNVVDPDDIIN-------KYGADTARLFILFAAPPA 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL--HKLARES 375
           + +++    +  A   + +    + +    +  +L   ++DLN       L  ++  ++S
Sbjct: 615 KELEWNDDAVEGAYRFICRLYDRAQNVRAGE--LLEFKHDDLNKEEKYARLKVYEALKKS 672

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            + +     FN       I  C E LN       E L QE
Sbjct: 673 FEVYTQSFAFNTL-----IAACMEALNALAPCKNEALEQE 707


>gi|294012801|ref|YP_003546261.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292676131|dbj|BAI97649.1| arginyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 575

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 108/335 (32%), Gaps = 58/335 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N  D   ++   AR  H     
Sbjct: 133 PT--GPMHMGHCRGAVVGDALATLLEHVGHKVIREYYIN--DAGGQVDVLARSAHVRYRE 188

Query: 93  NDAISIITSKNTQQFVKDT-----TRLACLAPTHQPRA----------TNHIPQMIYLIQ 137
                 +       +  D        LA         A          T  +  M+ +I+
Sbjct: 189 ALG-ETVGEIPEGLYPGDYLVPVGQALAAEYGDRYVGAPEGEWLVLFRTKAVAAMMEMIR 247

Query: 138 NIIL-HGHAYEANNEIIFDTSSIPNYGS-------FSRRKID-EQKMGTRVPEKYHKKNP 188
           + +   G     +++I    + +   G             +  +  +     E      P
Sbjct: 248 SDLALLG----IHHDIFSSEAELQAAGKPEAAEKWLREHDLVYDGVLEAPKGETPEDWEP 303

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDI----HGGGLD 239
            +  L++ +   +   + P  +    W    + M+ HY          DI    HGG + 
Sbjct: 304 VELPLFRSTRFGDDQ-DRPIRKSNGSWTYFGADMAYHYQKAQTADQLIDIWGADHGGTVK 362

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKF 297
            I      + A +   +   +     I    L  +G   KMSK  GNF+T+ +++     
Sbjct: 363 RI------QAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVV----- 411

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
             R     V+R  ML       +DF   ++ EA  
Sbjct: 412 --REVGKDVVRFTMLTRKADAQMDFDFAKVVEASK 444


>gi|300114688|ref|YP_003761263.1| isoleucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540625|gb|ADJ28942.1| isoleucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 940

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 55/137 (40%), Gaps = 11/137 (8%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   LG   D++  G D      ++ +  S           +  H   ++ +G+KM
Sbjct: 547 CVLEARKELGVPADLYLEGSDQHRGWFQSSLLTSVAIRGTAPYRTVLTHGFTVDAKGKKM 606

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++E+         A ++RL +  T YR  ++ + + L        +  
Sbjct: 607 SKSQGNVVAPQQVMESLG-------ADILRLWVAATDYRGEMNVSDEILKRIADSYRRMR 659

Query: 339 QTS----TSKGIIDPAV 351
            T+     +    DPA+
Sbjct: 660 NTARYLLANLNGFDPAI 676


>gi|224372504|ref|YP_002606876.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782978|sp|B9L8B8|SYR_NAUPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|223588954|gb|ACM92690.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 532

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/343 (15%), Positives = 102/343 (29%), Gaps = 95/343 (27%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQ-- 85
           PT     HIG+AR  +  D + R+ R+   +    Y  N     IT +   +   AR+  
Sbjct: 113 PT--GPLHIGHARGAVFGDAIARIGRHIGYDVVTEYYVNDAGRQITLLGLSVYLAAREIL 170

Query: 86  -----EHPSIPINDAISIITSKNTQQF-------------------------------VK 109
                        + I  + ++  ++F                                +
Sbjct: 171 GLDVKWPEEYYRGEYIKDLAAEAIKEFGEDYFKAEIDAENFNDDKLNMWAKDKMLNLIKE 230

Query: 110 DTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS 166
           D   L      +         H  ++  +++    +G  YE + ++   +S   +     
Sbjct: 231 DIKALNVTPFDNWVSEKELYKHWDEVRAILEK---NGALYEKDGKVWLKSSEYKD----- 282

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
               ++ ++  R   +           W +       + + WG    G +I     +  +
Sbjct: 283 ----EKDRVVVREDGRPTYLAGDIIYHWDKFKRNYDRYINIWGADHHG-YIARVKAAIKF 337

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           LG  FD             E  ++Q        E                 KMSK  GNF
Sbjct: 338 LG--FD---------PEKLEILLSQMVKLLKGGEPY---------------KMSKRAGNF 371

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           I +++++       +   A  +R   L       ++F V  L 
Sbjct: 372 ILVSDVV-------KDVGADALRFVFLTKKADTHLEFDVDELN 407


>gi|149911069|ref|ZP_01899697.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805895|gb|EDM65883.1| isoleucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 939

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 551 KEYAGAEIDLYLEGSDQHRGWFQSSLMISTAIHGKAPYKEVLTHGFVVDAKGRKMSKSIG 610

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   +++             V+R  +  T Y   +  + + L  +     +   T+ 
Sbjct: 611 NVMAPQDVMNRLG-------GDVLRWWVASTDYTGEMTVSDEILDRSADAYRRIRNTAR 662


>gi|256822881|ref|YP_003146844.1| isoleucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796420|gb|ACV27076.1| isoleucyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 938

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +  YL +  D++  G D      ++ +  +          +   H   ++ +G KM
Sbjct: 546 CVLEARDYLRQPADLYLEGSDQHRGWFQSSLLTATGMYGHAPYKHCLTHGFVVDGKGEKM 605

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +  N+++           A V+RL +    YR  +  + + L        +  
Sbjct: 606 SKSKGNVMAPNDVINKLG-------ADVLRLWVSSADYRGEMAVSDEILKRTGDTYRRLR 658

Query: 339 QTST 342
            TS 
Sbjct: 659 NTSR 662


>gi|19115794|ref|NP_594882.1| cytoplasmic leucine-tRNA ligase Lrs1 (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|1711638|sp|Q10490|SYLC_SCHPO RecName: Full=Putative leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|1314182|emb|CAA97370.1| cytoplasmic leucine-tRNA ligase Lrs1 (predicted)
           [Schizosaccharomyces pombe]
          Length = 1111

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 63/202 (31%), Gaps = 54/202 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DL+  H    +         +        NG L + G KMSKS GNF+T++
Sbjct: 690 PFDIRASGKDLVPNHLTFCLYTHTAIFDEKYWPKGIRANGHLLMNGEKMSKSTGNFMTLH 749

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           E         + + A   RLA+                                  + D 
Sbjct: 750 EA-------TKKFGADATRLAL----------------------------ADAGDTVDDA 774

Query: 350 AVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
               AL N     SAI  L+      +E  +N D L     + H           +K   
Sbjct: 775 NFEEALAN-----SAILRLYTQEAWCKEMMENLDNLRTGPYNFH-----------DKVFE 818

Query: 407 IAIEKLVQERLILLKMKKFSSA 428
             I +L++          F +A
Sbjct: 819 NEINQLIESSREAFSATLFKAA 840


>gi|78357185|ref|YP_388634.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123552202|sp|Q30ZF7|SYI_DESDG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78219590|gb|ABB38939.1| Isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 934

 Score = 54.9 bits (131), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 15/123 (12%)

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           ECS  +  YL +  D H G        H + +A S     I     +  H   ++ EGRK
Sbjct: 555 ECSFPADMYL-EGSDQHRGWF------HSSLLA-SVGTRGIPPYKAVLTHGYVVDGEGRK 606

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN I   E+++        + A ++R+ +    YRE +  + + L+       + 
Sbjct: 607 MSKSIGNGIAPQEIID-------KYGAEILRMWVSSADYREDVRISEEILSRLVDAYRRI 659

Query: 338 PQT 340
             T
Sbjct: 660 RNT 662


>gi|253581458|ref|ZP_04858683.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
 gi|251836528|gb|EES65063.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
          Length = 641

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 100/334 (29%), Gaps = 77/334 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T  D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVIARYKKTMGYDVFF-----LTGTDEH---GQKVEETARQKGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T     +FV+    L     T   R T   H   +  +++ +  +G  Y+     
Sbjct: 66  TPQEWTDIMAPKFVEMWKALNIEY-TDFIRTTEPRHKEAVKKILKKVYDNGDIYKGEYSG 124

Query: 153 IFDTS--------------SIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILW 194
            +  S                P+ G   R   +E         +     H  +  DFIL 
Sbjct: 125 KYCVSCETFVPENQIVNGNHCPDCGKELRVVREESYFFKMSKYQDALLAHIDSHPDFILP 184

Query: 195 KRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLGK 229
           +        +            + +  G P      HI            +A+      +
Sbjct: 185 RSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENNPE 244

Query: 230 VFD--------IHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKM 278
           +FD        +H  G D++  H         C   +  ++   NI  H G+   EG KM
Sbjct: 245 LFDKFWTNGEVMHLLGKDIVRFH----AIIWPCMLLSAGVKLPDNIVAH-GWWTSEGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           SKS GN +             + +     R  +L
Sbjct: 300 SKSKGNVV-------DPIAESKKYGVDAFRYCLL 326


>gi|188585176|ref|YP_001916721.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|229559953|sp|B2A6C2|SYL_NATTJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|179349863|gb|ACB84133.1| leucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 826

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 70/199 (35%), Gaps = 44/199 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E  + + +  G +N +G KMSKS G
Sbjct: 534 PVDQYIGGIEHAVLHLLYARFFTKVMYDQGYTNFKEPFSRL-LAQGMVNKDGAKMSKSKG 592

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++ +E+L       R++ A   RL +L      + +D+  + +      L +  +   
Sbjct: 593 NVVSPDEIL-------RTYGADTGRLFILFAAPPEKDLDWNDEGVEGCYRFLQRLYRLVN 645

Query: 343 SKGII------DPAV--------------LSALYND------LNTVSAIQALHKLAREST 376
               +      D                 +  + +D       NT  AI A+ +L   S+
Sbjct: 646 DNQNLVDLQLDDTKFTKEDKEYHRLIHKTIKKVTDDISERHNFNT--AISAIMELTNASS 703

Query: 377 KNHDLLPIFNASAHILGIE 395
           K  +   +  +     G+E
Sbjct: 704 KYKEQKEVNESLLRT-GLE 721


>gi|254497733|ref|ZP_05110506.1| isoleucyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254353026|gb|EET11788.1| isoleucyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 914

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 17/166 (10%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C    ++ L    DI+  G D       + +  S     +     +  H   ++ EGRK+
Sbjct: 526 CVLKQNNELAFPADIYFEGSDQHRGWFNSSLTTSVAMYGVAPYKMVLTHGYTVDAEGRKL 585

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN++ +++++           A ++RL +  T YR  +  + + +        +  
Sbjct: 586 SKSKGNYVALDQMVNQHG-------ADILRLWVASTDYRHEVSISDEIIKRNADAYRRIR 638

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQA--LHKLARESTKNHDLL 382
            T+          L A   D     A+QA  L +L + + K   LL
Sbjct: 639 NTAR--------FLLANLFDFAPAEAVQADELLELDKWAIKRCQLL 676


>gi|167540086|ref|XP_001741538.1| cysteinyl-tRNA synthetase [Entamoeba dispar SAW760]
 gi|165893954|gb|EDR22069.1| cysteinyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
          Length = 274

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 25/126 (19%)

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHILGIEVCKEH 400
           + SAL N+ +T +A+  L  L R+  +              L        + GIE  +  
Sbjct: 32  IHSALCNNFDTATAMNHLFALIRKCNEYLSSTSSTLLLRSALYYIQKMLKVFGIEEKQVS 91

Query: 401 LNKNISIAIEKL----VQERLILLKMKK---FSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
            + + +  ++       + R   +K K     +  D +R + L   G  +ED        
Sbjct: 92  SSSDNAPLLDTWCSFRTEVRKEAIKSKNTNILNLCDKVRDEDLPKIGVRVED-------D 144

Query: 453 RMTRWK 458
             T WK
Sbjct: 145 GKTAWK 150


>gi|309389593|gb|ADO77473.1| leucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 831

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/219 (16%), Positives = 77/219 (35%), Gaps = 51/219 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +           +E   N W+  G +  +G KMSKS G
Sbjct: 533 PVDQYIGGIEHAILHLLYARFFTKVVYDMDLTEHVEPFTN-WLAQGMVLKDGAKMSKSKG 591

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +   ++L+        + A   RL +L      + ++++ + +  A+  L++ W   +
Sbjct: 592 NVVDPKDILD-------EYGADTARLFILFAAPPEKDLEWSDKGVEGADRFLNRVWRFVT 644

Query: 342 TSKGIIDP----------------------AVLSALYND----LNTVSAIQALHKLARES 375
            +  +I                        A +  +  D    LN  +AI ++ +L  E 
Sbjct: 645 ENLELIKDTNSKLESSKLDPDAKALYRTMHASIKKVSEDIGSRLNFNTAISSIMELTNEV 704

Query: 376 -------TKNHDLLPIFNASAH--ILGIEVCKEHLNKNI 405
                  +      P+  A A   +L +      + + +
Sbjct: 705 YSYLNDRSSEETNAPLIKAVAENLVLLLAPFAPFITEEL 743



 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 17/96 (17%), Positives = 26/96 (27%), Gaps = 9/96 (9%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+    YV    P      H+G+ R   + DV+ R  R       V +           
Sbjct: 29  DPAKENYYVLEMFPYPSGNLHMGHVRVYSIGDVIARYKRMKGYN--VLHPMGWDAFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              A +       N      T  N     +    + 
Sbjct: 87  ENAAIKHG-----NIHPKEWTWDNIAHMKEQMKAMG 117


>gi|242062870|ref|XP_002452724.1| hypothetical protein SORBIDRAFT_04g031392 [Sorghum bicolor]
 gi|241932555|gb|EES05700.1| hypothetical protein SORBIDRAFT_04g031392 [Sorghum bicolor]
          Length = 346

 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    I               +  NG L L   KMS+S GNF+T+ 
Sbjct: 208 PFDIRVSGKDLIQNHLTFCIYNHTALLPEHHWPPGFRCNGHLMLNSEKMSESTGNFLTLE 267

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +       + + +   R A+
Sbjct: 268 DAI-------KKYSSDATRYAL 282


>gi|260948078|ref|XP_002618336.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720]
 gi|238848208|gb|EEQ37672.1| hypothetical protein CLUG_01795 [Clavispora lusitaniae ATCC 42720]
          Length = 569

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 66/397 (16%), Positives = 122/397 (30%), Gaps = 80/397 (20%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +YV  P  Y     H+G+   M++ D   R      G+K +     +T  D+  ++   
Sbjct: 21  TVYVTTPIFYVNARPHLGHLYSMLLGDTRVRWENLKPGQKTMF----LTGTDEHGLK--- 73

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILH 142
            +  +        ++  + +Q FV+    +         R T+  H+  + +     +  
Sbjct: 74  IQAVAEKEGIDPKVLVDRVSQNFVQMAEAVNVKY-DRFIRTTDNDHVKAVEHFWNAAMEK 132

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA------------- 189
           G  Y+ ++   +  S    Y       I + K G         +N               
Sbjct: 133 GLIYKGSHSGWYSVSDEAFYPPSQVEDIIDAKTGQPKKVSIETRNEVVFQEEENYFFRLS 192

Query: 190 -------DFI---------------LWKRSTPME--------PGWESPWGRGRPG----- 214
                  DF+               L       E        P W   WG   P      
Sbjct: 193 AFKDKLIDFLEKNPSFVQPSRKYHELLTELRQEELSDLSVSRPSWRLKWGITVPNDDSQK 252

Query: 215 ---WHIEC----SAMSSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
              W        +A             IH  G D++  H          A  IE    + 
Sbjct: 253 IYVWFDALINYLTAAGYPQQDMPIWPPIHIVGKDIMRFHCIY-WPIFLMAAGIELPKQVI 311

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +H+ +L  +G KMSKS GN +   EL        + +    +R+ ++  ++     +F+ 
Sbjct: 312 VHSHWLC-DGFKMSKSLGNVVEPIEL-------AQYYDPEPLRIYLMEQSNLGTDCNFSE 363

Query: 325 QRLTEAEILL-SKWPQTSTSKGIIDPAVLSALYNDLN 360
             L      L +KW    +  G     V  ++ +  +
Sbjct: 364 AALHNHRSKLINKWANIVSRIGGDKFDVEQSVQDFFD 400


>gi|241998714|ref|XP_002434000.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215495759|gb|EEC05400.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 1191

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 52/158 (32%), Gaps = 34/158 (21%)

Query: 221 AMSSHY-LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRK 277
           AM   +      D+   G DLI  H    I   C     E          NG L L   K
Sbjct: 663 AMRKEFEFWYPMDLRCSGKDLIPNHLSYCIFTHCAMWPSEPQKWVRGMRANGHLLLNSEK 722

Query: 278 MSKSNGNFITINELLETKKFGGRS-------------------WPAPVIRLAMLMTHYRE 318
           MSKS GNF+T+ + L+     G                       A ++RL         
Sbjct: 723 MSKSTGNFLTLADALDKFSADGMRLALADAGDGIEDANFVETMADAGILRLY-------S 775

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
            +++  + L  A +L     +T  +   +D    + + 
Sbjct: 776 FLEWVKEMLASASML-----RTGPTDSYVDKVFEADMN 808


>gi|15897507|ref|NP_342112.1| leucyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284174825|ref|ZP_06388794.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|14916942|sp|O33768|SYL2_SULSO RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|6015883|emb|CAB57710.1| isoleucyl-trna synthetase [Sulfolobus solfataricus P2]
 gi|13813756|gb|AAK40902.1| Leucyl-tRNA synthetase (leuS-2) [Sulfolobus solfataricus P2]
 gi|261602268|gb|ACX91871.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 944

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 61/166 (36%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I       +          NG +  EG+KMSKS  N I + 
Sbjct: 576 PLDIRHSGKDLIPNHLTFFIFNHAAIFQENLWPKAIAVNGLVLYEGKKMSKSLRNIIPLR 635

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +       G + +   V+R+A+  T      ++F+   +      L K  +   S     
Sbjct: 636 K-------GLKMYGVDVMRIAVSSTADMGSDVNFSESLVKTVGETLRKMYELFKSLDNYT 688

Query: 349 PAVLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHIL 392
                   + L       +  ++++   +T++ + L + +A   +L
Sbjct: 689 -------GDILGFPEKWLLSRIYEITSSTTRHMEALELRDAVNELL 727



 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 27/93 (29%), Gaps = 12/93 (12%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG--------EKCVTYVRNITDI----DDKII 80
           P      HIG+ R  +  D+L R  R                T +  + D     D ++I
Sbjct: 36  PYPNSPWHIGHGRTYVTGDILARYKRMRGYNVLFPMAFHYTGTPIMAMADAIAKGDKELI 95

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           E  +  +   P               F +D   
Sbjct: 96  ETFKDIYEISPDVIPRMSDPLFMANYFKEDIKA 128


>gi|219851353|ref|YP_002465785.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|254782869|sp|B8GFL4|SYM_METPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219545612|gb|ACL16062.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 663

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 27/175 (15%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      H+G+ R  +  D+  R LR+   E  V +V    +    I+  A ++  
Sbjct: 9   TCGLPYTNGPCHLGHLRTYVPGDMYVRYLRHRGEE--VVFVCGSDNHGTPIVVSAEEQ-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHA 145
                     ++ K    F +   ++            +A +H  +   ++Q +I  G+ 
Sbjct: 65  ----GVTPKELSLKYHHHFEETFIKMGIRFDRFGMTDGKANHH--RTREMMQRLIDKGYI 118

Query: 146 YEANNEIIFDTSS------------IPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
           Y A     + T+              P+ G+ +R    +Q  G  +      ++P
Sbjct: 119 YSATVSQSYCTTCSRFLPDRYVEGICPHCGAVARGDECDQGCGKHLEPG-EIRDP 172


>gi|78222646|ref|YP_384393.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78193901|gb|ABB31668.1| arginyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 569

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 110/377 (29%), Gaps = 66/377 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D + RLL     +    +  N  D   +I   A         
Sbjct: 139 PT--GPLHIGHGRGAAIGDTICRLLSASGFDVTREFYYN--DAGAQIANLALSVQSRCLG 194

Query: 93  ND--AISIITSKNTQQFVKDTTR--LA---CLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
            +              ++KD  R  L      A      A    P  +  I+       A
Sbjct: 195 IEPGDPRWPADGYQGDYIKDVARSYLNRETVDAGDQHVTAAGD-PNDLDAIRRFA---VA 250

Query: 146 Y---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPME 201
           Y   E + +++        Y   S    +   +   R   +       D  LW R+T   
Sbjct: 251 YLRREQDQDLLAFDVHFDVYSLESSLYTEGRVEEVVRRLIENGHTFEQDGALWLRTTDFG 310

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA----------- 250
              +    +         S  S  Y       H    +  F    NE             
Sbjct: 311 DDKDRVMRK---------SDGSYTYFVPDVAYHLAKWERGFTRVINEQGADHHSTITRVR 361

Query: 251 ---QSCCADRIEKTANIWIHNGFLNL----EGRKMSKSNGNFITINELLETKKFGGRSWP 303
              Q+  A   ++     +H   + +    E  K+SK  G+++T+ +L++          
Sbjct: 362 AGLQALNAGIPQEWPEYVLH-QMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGR------ 414

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTSTSKGIIDPAV 351
               R   LM      + F +    +            A   +S   + +  +GI  P+ 
Sbjct: 415 -DATRFFFLMRKPDSQLVFDIDLAKQQSLENPVYYVQYAHARISSIFEAACDRGISVPSF 473

Query: 352 LSALYNDLNTVSAIQAL 368
             A  + L T   I+ +
Sbjct: 474 PDAHVDLLETPEEIELI 490


>gi|302549952|ref|ZP_07302294.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302467570|gb|EFL30663.1| conserved hypothetical protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 241

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 50/139 (35%), Gaps = 10/139 (7%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +++ G   + ++G  + +                 V+RLA+L  H+  P+      L EA
Sbjct: 98  IHVTGEGGAAADGVRMDVAPAHPEHPGTPDDTDPAVLRLALLARHHDTPVRLEAAVLEEA 157

Query: 331 EILLSKWPQTSTS---------KGIIDPAVLSALYNDLNTVSAIQALHKLARE-STKNHD 380
              L++W                  +   +  A  +DL+    +  L ++  +    +  
Sbjct: 158 RATLARWRGAVARWARSPSRPVPDEVRGRLRDAWEDDLDVPRVLDVLRQVETDPDLPDGA 217

Query: 381 LLPIFNASAHILGIEVCKE 399
               +     +LG+++ ++
Sbjct: 218 RFETYAYVDRLLGLDLTRD 236


>gi|257386747|ref|YP_003176520.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169054|gb|ACV46813.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 930

 Score = 54.5 bits (130), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 67/192 (34%), Gaps = 18/192 (9%)

Query: 230 VFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H          I+     D  E   N+ +  G + L+G KMSKS G
Sbjct: 551 PVDQYVGGIEHAVMHLLYARFVTKAISDLELLDHREPFQNL-VTQGMVQLDGEKMSKSKG 609

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYR--EPIDFTVQRLTEAEILLSKWPQTS 341
           N ++   ++E        + A   RL M+    R     D+  + +  +   L++     
Sbjct: 610 NVVSPQNIVE-------EYGADTARLFMMQAA-RPERDFDWKDEGVESSHRFLTRLYDAV 661

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +     PA  +    D      I  +  +A ES +          +  +L +       
Sbjct: 662 EAHVGSPPAGEAGDVTDY-VRHEIDRVTAIADESYEQLTFTEALRETRELLSLLDRYAEA 720

Query: 402 NKNISIAIEKLV 413
            +  +  +E  +
Sbjct: 721 TEPHAETVEAAL 732


>gi|325089183|gb|EGC42493.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 1130

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 58/162 (35%), Gaps = 31/162 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 714 PLDVRVSGKDLIQNHLTFCLYIHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 773

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + +E        + A   R+A       + I+       E+           L +W +  
Sbjct: 774 DAVE-------KYGADATRIAFADAG--DAIE--DANFDESVANSNILRLFTLKEWIEEV 822

Query: 342 TSKGIID----PAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                +      A    L+++         L+ LARE+ K++
Sbjct: 823 AKDSFLRTGPADAFFDKLFDN--------ELNVLAREARKHY 856


>gi|288932631|ref|YP_003436691.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894879|gb|ADC66416.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 658

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 14/124 (11%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  I  DV  R LR    E  V +V         I+  A Q+  
Sbjct: 5   TCGLPYANGKAHIGHLRTYIPADVYVRYLRLRGEE--VIFVCGSDSHGTPIVVNAEQQGL 62

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHA 145
                     +     + F +    L         R T+   H  +   +++ +I  G+ 
Sbjct: 63  K------PKELVDIYHKHFQEIFKSLRVE-FDFYGR-TDSDYHHERTREIVKKMIEKGYV 114

Query: 146 YEAN 149
           Y   
Sbjct: 115 YPKE 118


>gi|78223524|ref|YP_385271.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78194779|gb|ABB32546.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 509

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 73/429 (17%), Positives = 130/429 (30%), Gaps = 103/429 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +        +T  D+      + E  +    +
Sbjct: 14  VNDVPHIGHAYTTLAADVLARYKRLKGYDVFF-----LTGTDEH---GQKVEKAANAAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN-NE 151
               +  +  ++F     +L         R T   H   + +L + ++  G  Y     +
Sbjct: 66  TPLELADRVVKRFQALWEKLDISYNDF-IRTTQERHKKGVTHLFREVMAKGDIYLGEYED 124

Query: 152 IIF------DTSSIPNYGSF--SRRKIDEQKMGT--------RVPEKYHKKNPADFILWK 195
                     T +    G      R +++ K  +        +     H +   DFI  K
Sbjct: 125 WYCTPCETFWTETQLIDGKCPDCNRPVEKLKEESYFFRMSKYQEQLLAHIEANPDFIQPK 184

Query: 196 RSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSSHYLGK----- 229
                   +                WG   PG        W    +   +  LG      
Sbjct: 185 SRRNEIISFVKEGLRDLSVSRTSFNWGIPVPGNERHVIYVWFDALTNYITA-LGYPDQAG 243

Query: 230 ------VFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                   D H  G D L F  H         A  +     ++ H G+  +EG+KMSKS 
Sbjct: 244 NYGKFWPVDAHLIGKDILRF--HAVYWPTFLMAAGLPVPRKVFAH-GWWTVEGQKMSKSL 300

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLM----------TH----YREPIDFTVQ--- 325
            N +  N L++        +    +R  +L           +H    +R   D       
Sbjct: 301 QNVVEPNMLVD-------KYGIDAVRYFLLREVPFGLDGDFSHAALVHRINSDLANDLGN 353

Query: 326 RLTEAEILLSKW-------PQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKL 371
            L+ +  +++K+       P   T       A   A+        +++     +QA+ ++
Sbjct: 354 LLSRSTAMVNKYFGGTLPQPGAMTELDAAFRARTEAMISQLESCMDEMAFSKGLQAIWEV 413

Query: 372 ARESTKNHD 380
                K  D
Sbjct: 414 ISAGNKYID 422


>gi|242398250|ref|YP_002993674.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242264643|gb|ACS89325.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 958

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 14/163 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I       R +        NGF  LEG KMSKS GN +   
Sbjct: 595 PLDWRCSAKDLIPNHLTFFIFNHVAIFRKKHWPRGIAVNGFGTLEGAKMSKSKGNVLNFI 654

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++    +    D+    + +    + ++ +  +     +
Sbjct: 655 DAIEENG-------ADVVRLYIMSLAEHDSDFDWKRSEVGKLRKQIERFYELISEFAQYE 707

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
              +  +  D      +  LH++ +      + L  F     +
Sbjct: 708 EKDVELMDID----KWL--LHRVNKAIKGTTEALEEFRTRTAV 744



 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 17 EFQAIDPSNI-RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           F+      + + Y+     Y     H+G+AR   + DV+ R  R            +IT
Sbjct: 20 VFEPQMDEKVPKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHIT 79


>gi|146421716|ref|XP_001486802.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
           6260]
 gi|146387923|gb|EDK36081.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 590

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 56/189 (29%), Gaps = 20/189 (10%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+      +   ++++    + Y C    Y     H+G+ R   + DV+ R +R     
Sbjct: 69  RIWKESSGSLNPAKSMNADGEKFYCCSMFPYPSGALHMGHLRVYTISDVVARYMRLKG-- 126

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K V +              A      I      +I T  N  +       L         
Sbjct: 127 KNVIHPMGWDAFGLPAENAA------IENGIDPAIWTRDNINKMKAQMD-LMLADFDWDR 179

Query: 124 RATNHIPQMIYLIQNII----LHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTR 178
             +   P+     Q I      HG AY    +I              +  ++D +    R
Sbjct: 180 EVSTCDPEFYRWTQKIFLLLVKHGLAYRKKAQINWDPVDQT----VLANEQVDSEGRSWR 235

Query: 179 VPEKYHKKN 187
              K  K++
Sbjct: 236 SGAKVEKRD 244


>gi|240280549|gb|EER44053.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 1130

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 27/160 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 714 PLDVRVSGKDLIQNHLTFCLYIHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 773

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + +E        + A   R+A       + I+       E+           L +W +  
Sbjct: 774 DAVE-------KYGADATRIAFADAG--DAIE--DANFDESVANSNILRLFTLKEWIEEV 822

Query: 342 TSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNH 379
                +      A ++ L  N       L+ LARE+ K++
Sbjct: 823 AKDSFLRTGPADAFFDKLFDN------ELNVLAREARKHY 856


>gi|164687829|ref|ZP_02211857.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
 gi|164603104|gb|EDQ96569.1| hypothetical protein CLOBAR_01473 [Clostridium bartlettii DSM
           16795]
          Length = 806

 Score = 54.1 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 43/185 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H            ++      E   N+ +  G + ++G KMSKS G
Sbjct: 514 PVDQYIGGVEHAIMHLLYARFFVKALKKVGMVDFDEPFKNL-LTQGMVLMDGSKMSKSKG 572

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  E+++        + A   RL +L        +D++ Q +      L++  +   
Sbjct: 573 NTVSPLEIID-------KYGADTARLFVLFAAPPERDLDWSEQGVEGCFRFLNRVYRLVD 625

Query: 343 SKGII---DPAV------LSALY-----------ND------LNTVSAIQALHKLAREST 376
               I   D  V        A+            +D       NT  AI +L +L  E  
Sbjct: 626 ELKDIAKSDAKVNVATKEDKAMRFTIHSTLKKVTDDLSFKFGFNT--AIASLMELINEMY 683

Query: 377 KNHDL 381
           K  +L
Sbjct: 684 KYKEL 688


>gi|109894994|sp|Q39VQ6|SYR_GEOMG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 562

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 63/377 (16%), Positives = 110/377 (29%), Gaps = 66/377 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D + RLL     +    +  N  D   +I   A         
Sbjct: 132 PT--GPLHIGHGRGAAIGDTICRLLSASGFDVTREFYYN--DAGAQIANLALSVQSRCLG 187

Query: 93  ND--AISIITSKNTQQFVKDTTR--LA---CLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
            +              ++KD  R  L      A      A    P  +  I+       A
Sbjct: 188 IEPGDPRWPADGYQGDYIKDVARSYLNRETVDAGDQHVTAAGD-PNDLDAIRRFA---VA 243

Query: 146 Y---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPME 201
           Y   E + +++        Y   S    +   +   R   +       D  LW R+T   
Sbjct: 244 YLRREQDQDLLAFDVHFDVYSLESSLYTEGRVEEVVRRLIENGHTFEQDGALWLRTTDFG 303

Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA----------- 250
              +    +         S  S  Y       H    +  F    NE             
Sbjct: 304 DDKDRVMRK---------SDGSYTYFVPDVAYHLAKWERGFTRVINEQGADHHSTITRVR 354

Query: 251 ---QSCCADRIEKTANIWIHNGFLNL----EGRKMSKSNGNFITINELLETKKFGGRSWP 303
              Q+  A   ++     +H   + +    E  K+SK  G+++T+ +L++          
Sbjct: 355 AGLQALNAGIPQEWPEYVLH-QMVTVMRGGEEVKISKRAGSYVTLRDLIDEVGR------ 407

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTSTSKGIIDPAV 351
               R   LM      + F +    +            A   +S   + +  +GI  P+ 
Sbjct: 408 -DATRFFFLMRKPDSQLVFDIDLAKQQSLENPVYYVQYAHARISSIFEAACDRGISVPSF 466

Query: 352 LSALYNDLNTVSAIQAL 368
             A  + L T   I+ +
Sbjct: 467 PDAHVDLLETPEEIELI 483


>gi|289523381|ref|ZP_06440235.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503073|gb|EFD24237.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 646

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 13/125 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R  R    +   T     TD         + +  +     
Sbjct: 16  VNDVPHIGHAYTTVAADVMARYKRMCGID---TLFATGTD-----EHGQKVQQVAQREGI 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNE 151
               +  +    F K    L   +     R T   HI +++  I + ++  G  Y+   E
Sbjct: 68  TPQELADRTVLNFKKLWEALNI-SCDDFVRTTEQRHI-EVVQYIFKKLMDQGDIYKGTYE 125

Query: 152 IIFDT 156
             +  
Sbjct: 126 GWYCV 130


>gi|307294518|ref|ZP_07574360.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306878992|gb|EFN10210.1| arginyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 575

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 61/335 (18%), Positives = 109/335 (32%), Gaps = 58/335 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N  D   ++   AR  H     
Sbjct: 133 PT--GPMHMGHCRGAVVGDALATLLEHVGHKVIREYYIN--DAGGQVDVLARSAHVRYRE 188

Query: 93  NDAISIITSKNTQQFVKDT-----TRLACLAPTHQPRA----------TNHIPQMIYLIQ 137
             +   +       +  D        LA         A          T  +  M+ +I+
Sbjct: 189 ALS-EDVGGIPEGLYPGDYLVPVGQALAAEYGDKYVGAPESEWLASFRTKAVAAMMDMIR 247

Query: 138 NIIL-HGHAYEANNEIIFDTSSIPNYGS-------FSRRKID-EQKMGTRVPEKYHKKNP 188
           + +   G     +++I    + +   G             +  +  +     E      P
Sbjct: 248 SDLALLG----IHHDIFSSEAELQAAGKPEAAEKWLREHDLVYDGVLEAPKGETPEDWEP 303

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDI----HGGGLD 239
            +  L++ +   +   + P  +    W    + M+ HY          DI    HGG + 
Sbjct: 304 VELPLFRSTKFGDDQ-DRPIKKSNGSWTYFGADMAYHYQKAQTADQLIDIWGADHGGTVK 362

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKF 297
            I      + A +   +   +     I    L  +G   KMSK  GNF+T+ +++     
Sbjct: 363 RI------QAAVAALTEGKARFDVKLIQMVRLLRDGEPVKMSKRAGNFVTLADVV----- 411

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
             R     V+R  ML       +DF   ++ EA  
Sbjct: 412 --REVGKDVVRFTMLTRKADAQMDFDFAKVVEASK 444


>gi|150400079|ref|YP_001323846.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|187647751|sp|A6URW2|SYM_METVS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150012782|gb|ABR55234.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 663

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D+  R LR     + V +V    +    I  +A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIFTRYLRLK--RENVFHVGGTDNHGVPITLKAEKE- 62

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
                      I  +      +D   L     +     ++ HI       + +  +G+ Y
Sbjct: 63  -----GVTPLDIVDRYHNAIKEDLDSLNVSFDSFGRTHSDIHIETAQEFYKTLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|118474979|ref|YP_891786.1| isoleucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166200202|sp|A0RNK3|SYI_CAMFF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118414205|gb|ABK82625.1| isoleucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 916

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 18/169 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  ++     ++  H   ++  G KMSKS GN I  +++        + +   ++RL +
Sbjct: 584 SCAINQKAPYKSVLTHGFTVDGNGNKMSKSKGNVIAPSDV-------AKRYGVEILRLWV 636

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL-NTVSAIQALHK 370
            ++ Y   +  +   L +      K   T           L A  NDL +  S    L K
Sbjct: 637 GLSDYSSDLKISDDILKQVAEQYRKIRNTIR--------FLLANINDLDDISSHFGTLDK 688

Query: 371 --LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             LAR +    ++   F    +  G  +    L+ ++S     + ++RL
Sbjct: 689 WILARATKSFKEVSECFKNYEYSKGFNILLNFLSTDLSGIYLDICKDRL 737


>gi|67458627|ref|YP_246251.1| methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536907|sp|Q4UMX2|SYM_RICFE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|67004160|gb|AAY61086.1| Methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 512

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVPHIGHAYTSVASDVIARFIRLCGFD-----VMFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T   ++ F      +         R T   H   +    Q ++ +G  YE   E 
Sbjct: 66  DPQKFTDHTSESFRHLMNVMNISNDDF-IRTTESRHKEAVAIFWQKLLDNGTIYEGFYEG 124

Query: 153 IFDTS 157
            +   
Sbjct: 125 WYAVR 129


>gi|57237679|ref|YP_178927.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|57166483|gb|AAW35262.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058288|gb|ADT72617.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 628

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 62/344 (18%), Positives = 100/344 (29%), Gaps = 67/344 (19%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTS------------SIPNYGSFSRRKIDEQ---KMGTRVPEKYHKKNPADFILWK 195
                              S P+ G  +R   +E    K+     +        D IL K
Sbjct: 122 HYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLSKYQDKILQWYEEKDPILPK 181

Query: 196 RSTPMEPGW-------------ESPWGRGRP-----GWHIECSAM-SSHYLGKVFDIHGG 236
                   +                WG   P       HI    + +        D    
Sbjct: 182 NKKNELINFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLDFQSK 241

Query: 237 GLDLIF-PHHENEIAQSCCADRIEKTANIWIH-----------NGFLNLEGRKMSKSNGN 284
           G +  F P H + + +              +            +G+   EG KMSKS GN
Sbjct: 242 GENTKFWPAHVHLVGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKSKGN 301

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
            +   E+++       ++ +   R  +L    +    DF+   L
Sbjct: 302 VVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENML 338


>gi|120602286|ref|YP_966686.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166980054|sp|A1VCU3|SYI_DESVV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120562515|gb|ABM28259.1| Isoleucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 938

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 15/123 (12%)

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           EC   +  YL +  D H G        H + +A S     +    ++  H   ++ +GRK
Sbjct: 556 ECGFPADLYL-EGSDQHRGWF------HSSLLA-SIGTRGVPPYRSVLTHGYVVDGDGRK 607

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN +   E+++          A V+RL +    YRE I  + + L        + 
Sbjct: 608 MSKSVGNVVAPQEIIDKHG-------AEVLRLWVASVDYREDIRISEEILNRLVDAYRRI 660

Query: 338 PQT 340
             T
Sbjct: 661 RNT 663


>gi|46580336|ref|YP_011144.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|81566588|sp|Q72AR5|SYI_DESVH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46449753|gb|AAS96403.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311233685|gb|ADP86539.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 938

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 15/123 (12%)

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           EC   +  YL +  D H G        H + +A S     +    ++  H   ++ +GRK
Sbjct: 556 ECGFPADLYL-EGSDQHRGWF------HSSLLA-SIGTRGVPPYRSVLTHGYVVDGDGRK 607

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN +   E+++          A V+RL +    YRE I  + + L        + 
Sbjct: 608 MSKSVGNVVAPQEIIDKHG-------AEVLRLWVASVDYREDIRISEEILNRLVDAYRRI 660

Query: 338 PQT 340
             T
Sbjct: 661 RNT 663


>gi|255263851|ref|ZP_05343193.1| isoleucyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106186|gb|EET48860.1| isoleucyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 968

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 61/183 (33%), Gaps = 24/183 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC  +       +  H   L+ +G KMSKS GN I   +++E        + A ++RL 
Sbjct: 623 QSCGTNGRAPYRAVLTHGFTLDEKGMKMSKSIGNTIAPEKVVE-------QYGADILRLW 675

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYNDLNTVSA- 364
           +  + Y   +    + L        +   T      T     +   + A           
Sbjct: 676 VAQSDYTVDLRIGPEILKNVADSYRRLRNTMRYMLGTLSDFTEADRVEAKD----MPELE 731

Query: 365 ------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERL 417
                 +  L +  R+    +D   +F +  + L +++   + +    +   +   + R 
Sbjct: 732 RWVLHRLSELDETVRQGYAAYDFQGVFQSVFNFLTLDLSSYYFDIRKDVFYCDGDTERRR 791

Query: 418 ILL 420
              
Sbjct: 792 AAR 794


>gi|222055242|ref|YP_002537604.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221564531|gb|ACM20503.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 509

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 63/330 (19%), Positives = 104/330 (31%), Gaps = 72/330 (21%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    E        +T  D+      + E  +    +
Sbjct: 14  VNDVPHIGHAYTTLAADVLARYRRLKGYEVFF-----LTGTDEH---GQKVEKAANAAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  ++F     +L     T   R T   H   +  + ++++  G  Y    E 
Sbjct: 66  TPQELADRVMKRFQALWEKLDISY-TDFIRTTQERHKKGVSKIFKDVMEKGDIYLGEYED 124

Query: 153 IFDT--------SSIPNY-GSFSRRKIDEQKMGT--------RVPEKYHKKNPADFILWK 195
            + T        + + +Y      R  ++ K  +        +     H +   DFI  K
Sbjct: 125 WYCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQEQLLAHIEANPDFIQPK 184

Query: 196 RSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSSHYLGK----- 229
                   +                WG   PG        W    +   +  LG      
Sbjct: 185 SRRNEIISFVKEGLRDLSVSRTTFSWGIPVPGNDKHIIYVWFDALANYITA-LGYPEESG 243

Query: 230 ------VFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                   D H  G D L F  H         A  +     ++ H G+  +EG+KMSKS 
Sbjct: 244 NFDKFWPVDAHLIGKDILRF--HAVYWPTFLMAAGLPLPKKVFAH-GWWTIEGQKMSKSL 300

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML 312
            N +  N L+E        +    +R  +L
Sbjct: 301 QNVVEPNMLVE-------KYGVDAVRYFLL 323


>gi|294950055|ref|XP_002786438.1| hypothetical protein Pmar_PMAR005139 [Perkinsus marinus ATCC 50983]
 gi|239900730|gb|EER18234.1| hypothetical protein Pmar_PMAR005139 [Perkinsus marinus ATCC 50983]
          Length = 479

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDN-GQRMTRWK 458
               ++  F  AD IR  L++ G  L D       G  +T W+
Sbjct: 433 NNARRVCNFKEADRIRDLLKANGIGLMDEPGGRGRGSEVTTWR 475


>gi|77165098|ref|YP_343623.1| lysine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
 gi|254434116|ref|ZP_05047624.1| lysyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|76883412|gb|ABA58093.1| lysyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090449|gb|EDZ67720.1| lysyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 641

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 58/315 (18%), Positives = 101/315 (32%), Gaps = 41/315 (13%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR--------- 84
           T     H+G+ R +++ D LYR LR    E    Y  +  D  D +   A          
Sbjct: 21  TPSGRVHVGSLRGVLIHDALYRALRDKGTEATYQYGIDDYDPLDGLPADAAPSLQEYMGH 80

Query: 85  -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR----------ATNHIPQMI 133
              +   P     + +      +F+     L   A  ++ R          A + I +  
Sbjct: 81  PLCNIPAPAGSNATDLADHYISEFLAIFPELGVDAQVYRMRDIYRSGRFNQAVDAILEKS 140

Query: 134 YLIQNIILH-GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
            +++ I     HA     +         N G      I    +     ++      AD +
Sbjct: 141 DVVRKIYAEVSHA-ARPEDWYPFQVICENCGK-----IGTTIVTAYDGKEVTYHCKADLV 194

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
            W +    +       GRG+  W +E +A   H  G    I G G D        ++A  
Sbjct: 195 SWAQGCGYQGKVSPFDGRGKLPWKLEWTA-KWHTFG--ITIEGAGKDHCTKGGSRDVAAR 251

Query: 253 C--CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           C           N  +   F  + G KMS S G  +   E+           P  ++R  
Sbjct: 252 CLKEIFGDSPPLN--VPYEFFLVSGAKMSSSKGVGMAAKEI-------AHFLPPEILRFL 302

Query: 311 MLMTHYREPIDFTVQ 325
           ++ T  +  ++F+  
Sbjct: 303 IVRTPPKRTVNFSTD 317


>gi|225560899|gb|EEH09180.1| leucyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 1130

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 58/162 (35%), Gaps = 31/162 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 714 PLDVRVSGKDLIQNHLTFCLYIHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 773

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + +E        + A   R+A       + I+       E+           L +W +  
Sbjct: 774 DAVE-------KYGADATRIAFADAG--DAIE--DANFDESVANSNILRLFTLKEWIEEV 822

Query: 342 TSKGIID----PAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                +      A    L+++         L+ LARE+ K++
Sbjct: 823 AKDSSLRTGPADAFFDKLFDN--------ELNVLAREARKHY 856


>gi|212724084|ref|NP_001132147.1| hypothetical protein LOC100193566 [Zea mays]
 gi|194693568|gb|ACF80868.1| unknown [Zea mays]
          Length = 170

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 365 IQALHKLARESTKNHDLLPIF--NASAHIL-GIEVCKEHLNKNISIAIEKLVQERLILLK 421
           IQAL  L  E      +L +   ++ A +L  ++             +++ +++R +  K
Sbjct: 70  IQALIALETELKNKLSILGLMPSSSLAEVLKQLKDKSLKRAGLTEEQLQEQIEQRNVARK 129

Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
            K+F  +D IRK L +KG  L D          T W+
Sbjct: 130 NKQFEISDGIRKNLATKGIALMDE------PSGTVWR 160


>gi|85374704|ref|YP_458766.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787787|gb|ABC63969.1| leucyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 836

 Score = 54.1 bits (129), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 64/204 (31%), Gaps = 46/204 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEI-----AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             D + GGL+    H            +       +    ++ NG + L G KMSKS GN
Sbjct: 542 PIDYYVGGLEHASQHLIYFRFISHFLHAIGMTPTSEPVKNFLDNGLVKLGGEKMSKSKGN 601

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKW------ 337
            +   E ++        + A  +RL +L  T  R  ID+    +   +  LS+       
Sbjct: 602 VVIPTEAVD-------KYGADALRLYILADTPLRRDIDWDDSGIEGKQRFLSQIWTLAGQ 654

Query: 338 ----PQTSTSKGIIDPAVLSAL----------YNDL----NTVSAIQALHKLARE----- 374
               P           A  +A+            DL       +AI  LH    E     
Sbjct: 655 IASAPALEGEPAPGTDAEKAAMRELAKIAKEVAEDLEERRGFHNAIARLHSFVGELRPLV 714

Query: 375 ----STKNHDLLPIFNASAHILGI 394
                 +   L  +      +LG+
Sbjct: 715 AGASDAEKPLLRHVMAEFMKVLGV 738


>gi|300175096|emb|CBK20407.2| unnamed protein product [Blastocystis hominis]
          Length = 1186

 Score = 53.7 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 8/83 (9%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD-RIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
            FDI   G DLI  H    +           K    +  NG + L   KMSKS GNF+T+
Sbjct: 624 PFDIRVSGKDLIKNHLMMSLYIHQAIWPDGSKMPRSFFCNGHIQLNNEKMSKSTGNFLTV 683

Query: 289 NELLETKKFGGRSWPAPVIRLAM 311
           ++ +       + + A   R A 
Sbjct: 684 DDAI-------QQFGADATRFAC 699


>gi|307747746|gb|ADN91016.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 628

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 62/349 (17%), Positives = 97/349 (27%), Gaps = 77/349 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTS------------SIPNYGSFSRRKIDEQ---KMGTRVPEKYHKKNPADFILWK 195
                              S P+ G  +    +E    K+     +        D IL K
Sbjct: 122 HYCISCESFFTQSQLINDCSCPDCGKNTTILKEESYFFKLSKYQDKILQWYEEKDPILPK 181

Query: 196 RSTPMEPGW-------------ESPWGRGRPG-----------WHIECSAMSSHYLGKVF 231
                   +                WG   P            W        S       
Sbjct: 182 NKKNELINFVQSGLKDLSITRTSFDWGIKLPQEINDDKHIIYVWLDALFIYIS-----SL 236

Query: 232 DIHGGGLDLIF-PHHENEIAQSCCADRIEKTANIWIH-----------NGFLNLEGRKMS 279
           D    G +  F P H + I +              +            +G+   EG KMS
Sbjct: 237 DFQSKGENAKFWPAHVHLIGKDILRFHAIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMS 296

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           KS GN +   E+++       ++ +   R  +L    +    DF+   L
Sbjct: 297 KSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENML 338


>gi|302413561|ref|XP_003004613.1| leucyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261357189|gb|EEY19617.1| leucyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 1091

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 56/158 (35%), Gaps = 21/158 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         +        NG L L G KMSKS GNF+T+ 
Sbjct: 773 PLDLRSSGKDLIGNHLTFFLYIHIAIFPKKYWPRAIRTNGHLLLNGEKMSKSTGNFMTLE 832

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWP----QTST 342
           ++        + + A   R+ +      + +   +F      +A + L        +T  
Sbjct: 833 DM-------AKKYGADASRIGLADAG--DTMGDSNFEEDVANQAILRLHTARDWCEETVK 883

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
           +K  +     +      N       L+ LA+E+   + 
Sbjct: 884 NKSELRTGEYNYFDEIFN-----NDLNALAKETIAQYT 916


>gi|305431875|ref|ZP_07401042.1| leucine--tRNA ligase [Campylobacter coli JV20]
 gi|304444959|gb|EFM37605.1| leucine--tRNA ligase [Campylobacter coli JV20]
          Length = 810

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  A + +  G +  +G KMSKS GN +  ++++         + A   RL +L      
Sbjct: 563 EPFARL-LTQGMVLKDGAKMSKSKGNVVDPDDIIN-------KYGADTARLFILFAAPPV 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL--HKLARES 375
           + +++    +  A   + +    + +    +  +L   ++DLN       L  ++  ++S
Sbjct: 615 KELEWNDDAVEGAYRFICRLYDRAQNVRAGE--LLEFKHDDLNKEEKYARLKVYEALKKS 672

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            + +     FN       I  C E LN       E L QE
Sbjct: 673 FEVYTQSFAFNTL-----IAACMEALNALAPCKNEALEQE 707


>gi|261402933|ref|YP_003247157.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369926|gb|ACX72675.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 655

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D++Y+ L+     + V +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIMYKYLKLRG--EDVIHVGGTDNHGVPITLTAEKE- 62

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +   I  K   +  +D   L        +  +  HI         +  +G+ Y
Sbjct: 63  -----GKSPEEIVEKYHNEIKEDLDLLNVEFDAFGKTHSQIHIETAQEFYLKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|289581377|ref|YP_003479843.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530930|gb|ADD05281.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 904

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 15/128 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A     +  E   N+ +  G + L+G KMSKS G
Sbjct: 535 PVDQYVGGIEHAVMHLLYSRFFTKVLADHEGLEHREPFTNL-LAQGMVQLDGEKMSKSKG 593

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++   ++E        + A   RL M+         D++ + +      L++  +   
Sbjct: 594 NTVSPQRIVE-------EYGADTARLFMMQAAQPERDFDWSEEGVRSTNAFLTRLKEMVE 646

Query: 343 SKGIIDPA 350
                 PA
Sbjct: 647 DFATEQPA 654


>gi|220935447|ref|YP_002514346.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782842|sp|B8GV13|SYL_THISH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219996757|gb|ACL73359.1| leucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 817

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 58/166 (34%), Gaps = 44/166 (26%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
           D  E    + +  G +  +G KMSKS GN +    L+E        + A  +RL M+   
Sbjct: 556 DGDEPFTRL-LTQGMVLKDGAKMSKSKGNTVDPEALIER-------YGADTVRLFMMFA- 606

Query: 316 YREP----IDFTVQRLTEAEILLSK-WPQT-----STSKGIIDPAVLSA----------- 354
              P    ++++   +  A   L + W Q        +   +D A L+A           
Sbjct: 607 --APPELSLEWSDSGVEGAYRFLKRLWKQVHDHVQGGAAPALDKAALNADQQALRRKLHQ 664

Query: 355 ----LYND------LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
               + +D       NT  AI A  +L  E  +  D      A   
Sbjct: 665 TLAKVSDDIGRRTTFNT--AIAACMELMNELGRFEDKSGQGRAVMQ 708


>gi|148265184|ref|YP_001231890.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146398684|gb|ABQ27317.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 509

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 75/429 (17%), Positives = 130/429 (30%), Gaps = 103/429 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    E        +T  D+      + E  +    +
Sbjct: 14  VNDVPHIGHAYTTLAADVLARYKRLKGFEVFF-----LTGTDEH---GQKVEKAANAAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  ++F     +L     T   R T   H   +  L   ++  G  Y    E 
Sbjct: 66  TPQELADRVMKRFQALWEKLDISY-TDFIRTTQERHKKGVADLFTKVMGKGDIYLGEYED 124

Query: 153 IFDT--------SSIPNY-GSFSRRKIDEQKMGT--------RVPEKYHKKNPADFILWK 195
            + T        + + +Y      R  ++ K  +        +     H +   DFI  K
Sbjct: 125 WYCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQEQLLAHIEANPDFIQPK 184

Query: 196 RSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSSHYLGK----- 229
                   +                WG   PG        W    +   +  LG      
Sbjct: 185 SRRNEIISFVREGLRDLSVSRTTFTWGIPVPGNDKHVIYVWFDALTNYITA-LGYPDESG 243

Query: 230 ------VFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                   D H  G D L F  H         A  +     ++ H G+  +EG+KMSKS 
Sbjct: 244 NFSKFWPVDAHLIGKDILRF--HAVYWPTFLMAAGLPVPKKVFAH-GWWTVEGQKMSKSL 300

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLM----------TH----YREPIDFTVQ--- 325
            N +  N L++        +    IR  +L           +H    +R   D       
Sbjct: 301 QNVVEPNMLID-------KYGVDAIRYFLLREVPFGLDGDFSHTALVHRINSDLANDLGN 353

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAV--------------LSALYNDLNTVSAIQALHKL 371
            L  +  +++K+         +   +              + A  ++L    A+Q++ ++
Sbjct: 354 LLNRSTAMVNKYFGGVVQAPGVFNEIDSIYREKTEEMVRQVDAHLDELAFSKALQSIWEV 413

Query: 372 ARESTKNHD 380
                K  D
Sbjct: 414 VSAGNKYID 422


>gi|172048411|sp|A8Z6P6|SYI_CAMC1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|158605024|gb|ABW74825.1| isoleucyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 918

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 59/156 (37%), Gaps = 13/156 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +      +I  H   ++ +G KMSKS GN I   ++ +T           ++RL +
Sbjct: 586 STAINSHAPYESILTHGFTVDAKGEKMSKSKGNVIAPQDVAKTHGV-------EILRLWV 638

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI-----Q 366
            M+ Y   +  +   L +      K   T     + +   L +L  + N +        +
Sbjct: 639 GMSDYSSDLKISEDILKQISEQYRKIRNTIRFL-LANVNDLESLNTEFNILDKWILARAK 697

Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
            +   A    KN+D    FN   + L  ++   +L+
Sbjct: 698 KVFDEASACFKNYDFSKGFNILLNFLSADLSGVYLD 733


>gi|154333954|ref|XP_001563232.1| leucyl-tRNA synthetase [Leishmania braziliensis MHOM/BR/75/M2904]
          Length = 1075

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 25/143 (17%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG + ++  KM+KS GNF
Sbjct: 682 PVDLRCSGKDLIQNHLTMFLYNHAAIWPA--DESKWPQRIFCNGHIQVDSEKMAKSKGNF 739

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR-----------LTEAEIL 333
           I++ E ++T       + A   RLA        +  +F  +            L +A+  
Sbjct: 740 ISLREAIDT-------YGADATRLACADAGDSMDDANFVRETAAGFVLKMTTLLEQAKET 792

Query: 334 LSKWPQTSTSKGIIDPAVLSALY 356
           + +    S      D    + + 
Sbjct: 793 VERADLRSGDYNEFDKIFQNTMN 815


>gi|322504457|emb|CAM45653.2| putative leucyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 1075

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 49/143 (34%), Gaps = 25/143 (17%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG + ++  KM+KS GNF
Sbjct: 682 PVDLRCSGKDLIQNHLTMFLYNHAAIWPA--DESKWPQRIFCNGHIQVDSEKMAKSKGNF 739

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR-----------LTEAEIL 333
           I++ E ++T       + A   RLA        +  +F  +            L +A+  
Sbjct: 740 ISLREAIDT-------YGADATRLACADAGDSMDDANFVRETAAGFVLKMTTLLEQAKET 792

Query: 334 LSKWPQTSTSKGIIDPAVLSALY 356
           + +    S      D    + + 
Sbjct: 793 VERADLRSGDYNEFDKIFQNTMN 815


>gi|308163199|gb|EFO65558.1| Leucyl-tRNA synthetase [Giardia lamblia P15]
          Length = 1173

 Score = 53.7 bits (128), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 28/165 (16%)

Query: 220 SAMSSHY-LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLE 274
           +AM   +      D+   G DLI  H      N  A     +   K       NG L L 
Sbjct: 736 TAMRESFCFWYPVDLRCSGKDLIPNHLTMMLYNHTAIWS--NDEAKWPRGMRANGHLQLN 793

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAE 331
             KMSK++GNF+T +E +       R + A  +R A+      + +D   F  +    A 
Sbjct: 794 DAKMSKASGNFLTASEAI-------RKYGADAVRFALADAG--DGLDDANFKEETANNAV 844

Query: 332 ILLSKW----PQTSTSKGIIDPAVLSALYNDLNTVSAIQA--LHK 370
           + L        +   +  +  P       +  NT+ A  A  +H+
Sbjct: 845 LRLYNLLSICQELLAASAVCYPESYK---DIYNTIGAGSADCIHE 886


>gi|52550379|gb|AAU84228.1| methionyl-tRNA synthetase [uncultured archaeon GZfos3D4]
          Length = 541

 Score = 53.7 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 44/120 (36%), Gaps = 13/120 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P V    HIG+ R  +  D+  R+LR    +  V ++         I+  A  +      
Sbjct: 16  PYVNGECHIGHLRTYVPADIYVRMLRKMGYD--VIFISGSDTHGTPIVLSAEAQ------ 67

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNIILHGHAYEAN 149
                 +  K  + F +    L      +  R    +NH  +   +++ +I +G+ ++  
Sbjct: 68  GITPEEVVKKYHEHFKRMFQALNV-NFDYYGRTDSESNH-RRTTEIVKKLIENGYVHKKE 125



 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+I+ H     A    A      A   + +G + + G   SKS GN I + E L
Sbjct: 290 VHFIGTDIIYHHCIFWPAMLKGAGYSLPDAV--VASGMVKINGGTFSKSRGNVIWVKEFL 347

Query: 293 ETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR 326
           E        +    +R  ++  + + + ++F+   
Sbjct: 348 ER-------FHPDTLRYYLVAQSSHTKELNFSWDS 375


>gi|163784145|ref|ZP_02179086.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880589|gb|EDP74152.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 633

 Score = 53.7 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +   T+    TD     I+++ +E        
Sbjct: 14  VNDVPHIGHAYTTVAADVLARYNRQKGIK---TFFLTGTDEHGLKIQKSAEEK-----GI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  Q+F +    L         R T  +HI  + Y+ Q    +G  Y    E 
Sbjct: 66  TPKELADQTHQKFKELWQVLNISY-DRFIRTTDEDHIKAVQYIFQKCYENGDIYLGKYEG 124

Query: 153 IFDT 156
            +  
Sbjct: 125 WYCV 128



 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +E    ++ H G+  +EG+KMSKS GN +     
Sbjct: 257 DVHIVGKDILRFHAVYWPAFLMSA-GLEIPEKVFAH-GWWTVEGKKMSKSLGNVV----- 309

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                   +S+    +R  ++
Sbjct: 310 --DPFKAVKSYGVDELRYFLM 328


>gi|294496309|ref|YP_003542802.1| leucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667308|gb|ADE37157.1| leucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 961

 Score = 53.7 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 8/110 (7%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
             G DLI  H    +         E        NGF++LEG+KMSKS G  +T++E +  
Sbjct: 589 SSGKDLIPNHLLFFLFHHVAIFGEENWPRAIAINGFVSLEGQKMSKSRGPLLTLSEAV-- 646

Query: 295 KKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTS 343
                + + A + R+ +L +    +  D+    +  A   + ++   +  
Sbjct: 647 -----KDYGADISRMYILSSAEQTQDADWKNSGIESARRQVDRFYHFAKD 691


>gi|154277858|ref|XP_001539762.1| leucyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
 gi|150413347|gb|EDN08730.1| leucyl-tRNA synthetase [Ajellomyces capsulatus NAm1]
          Length = 1081

 Score = 53.7 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 27/160 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 702 PLDVRVSGKDLIQNHLTFCLYIHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 761

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + +E        + A   R+A       + I+       E+           L +W +  
Sbjct: 762 DAVE-------KYGADATRIAFADAG--DAIE--DANFDESVANSNILRLFTLKEWIEEV 810

Query: 342 TSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNH 379
                +      A ++ L  N       L+ LARE+ K++
Sbjct: 811 AKDSSLRTGPADAFFDKLFGN------ELNVLAREARKHY 844


>gi|32491043|ref|NP_871297.1| hypothetical protein WGLp294 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|81741734|sp|Q8D2R0|SYI_WIGBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25166249|dbj|BAC24440.1| ileS [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 940

 Score = 53.7 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 15/112 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S           I  H   ++  G+KMSKS GN I+  +++         + A ++R
Sbjct: 576 IILSIAITGGIPCKKILAHGFVVDSNGKKMSKSIGNVISPKDIIN-------EFGADILR 628

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L +  + Y+  I  + + L     +  +   TS          L +  ND N
Sbjct: 629 LWVASSDYKSDISISKEILLRTVDIYRRIRNTSR--------FLLSNLNDFN 672


>gi|194246768|ref|YP_002004407.1| methionyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807125|emb|CAP18563.1| Methiony-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 517

 Score = 53.7 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 82/217 (37%), Gaps = 54/217 (24%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D+I  H  + +              I+  + F+  +  KMSKS GN + I++L
Sbjct: 262 DIHIIGKDIIRFHLVHFLILLISL--ELPLPKIFFVHPFILFDKNKMSKSKGNVLYIDDL 319

Query: 292 LETKKFGGRSWPAPVIRLAMLMTH---YREPIDFTVQRLTE---------AEILLSK--- 336
           L       +++    IR  ML  H   Y +  + T + L E            LL++   
Sbjct: 320 L-------KTFSVDTIRYFML--HEIPYNQDGNITHELLRERHNTDLANTIGNLLNRTLG 370

Query: 337 ---WPQTSTSKGIIDPAV---------LSAL------YNDLNTVSAIQALHKLARESTKN 378
                +    K +I P +         L AL        + +   AI+ + +LAR S K 
Sbjct: 371 MLKAYRNGHLKKVILPEILEIDLSKKSLEALPLIQKKVFNFHISDAIEVIIQLARFSNKY 430

Query: 379 HDLLP---IFNASAHILGIEVCKEHLNKNISIAIEKL 412
            DL     +F  S         ++ L+  +   IE L
Sbjct: 431 IDLAKPWILFKESDK-------QDVLDHVLYSLIETL 460


>gi|330925984|ref|XP_003301278.1| hypothetical protein PTT_12736 [Pyrenophora teres f. teres 0-1]
 gi|311324129|gb|EFQ90623.1| hypothetical protein PTT_12736 [Pyrenophora teres f. teres 0-1]
          Length = 1120

 Score = 53.7 bits (128), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 74/223 (33%), Gaps = 36/223 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E     +  NG L L G KMSKS GNF+TI 
Sbjct: 723 PLDMRTSGKDLIQNHLTFNLYVHTAIFPKENWPRSFRVNGHLLLNGEKMSKSTGNFLTIA 782

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
             +E        + A   R+A+               +T+A    +           +  
Sbjct: 783 GAVE-------KFGADATRIALADAG---------DEITDANFEETVANSNILKLFELRK 826

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                +   +    A   + K   E  KN D++   + S  +L         +K     +
Sbjct: 827 WCEELMNEAVYVPDAAAYMEKRTNERVKNPDVIQRQSGSERLL--------FDKMFDNEM 878

Query: 410 EKLVQ---------ERLILLKMK--KFSSA-DYIRKQLESKGF 440
             L+             + LK     F+SA D+ R+  ++ G 
Sbjct: 879 NVLIHDAYTHYSNTAYKLALKSGFYDFTSARDFYREATKAAGI 921


>gi|148826387|ref|YP_001291140.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229846022|ref|ZP_04466134.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166200212|sp|A5UDA6|SYI_HAEIE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148716547|gb|ABQ98757.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229811026|gb|EEP46743.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 941

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|319760262|ref|YP_004124200.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
 gi|318038976|gb|ADV33526.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
          Length = 951

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +G KMSKS GN I+  ++++        + + V+RL +
Sbjct: 589 SVAINNKAPYKQVLSHGFTVDSQGNKMSKSLGNIISPKDIID-------KFGSDVLRLWI 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             + Y + +  + + L     +  +   T             A  ND N
Sbjct: 642 ASSDYSKDMTVSDRNLKSITEIYRRIRNTIR--------FCLANLNDFN 682


>gi|157866296|ref|XP_001681854.1| leucyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68125153|emb|CAJ02955.1| putative leucyl-tRNA synthetase [Leishmania major strain Friedlin]
          Length = 1075

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 25/143 (17%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG + ++  KM+KS GNF
Sbjct: 682 PVDLRCSGKDLIQNHLTMFLYNHAAIWPA--DESKWPRAIFCNGHIQVDNEKMAKSKGNF 739

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR-----------LTEAEIL 333
           I++ E ++        + A   RLA        +  +F  +            L +A+  
Sbjct: 740 ISLREAMDM-------YGADATRLACADAGDSMDDANFVRETAAGFVLKMTTLLEQAKET 792

Query: 334 LSKWPQTSTSKGIIDPAVLSALY 356
           + +    S      D    + + 
Sbjct: 793 VERTDLRSGDYNEFDKIFNNTMN 815


>gi|261203657|ref|XP_002629042.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239586827|gb|EEQ69470.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239608139|gb|EEQ85126.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
          Length = 1115

 Score = 53.3 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 27/160 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 699 PLDVRVSGKDLIQNHLTFCLYIHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 758

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + ++        + A   R+A       + I+       E+           L +W +  
Sbjct: 759 DAVD-------KYGADATRIAFADAG--DAIE--DANFDESVANSNILRLFTLKEWIEEV 807

Query: 342 TSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNH 379
                +      A ++ L  N       L+ LARE+ K++
Sbjct: 808 AKDNSLRTGPADAFFDKLFDN------ELNVLAREARKHY 841


>gi|190345447|gb|EDK37332.2| hypothetical protein PGUG_01430 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1093

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 27/145 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I         +        NG L L   KMSKS GNF+T++
Sbjct: 680 PLDIRASGKDLIPNHLTFFIYCHVALFPRKMWPKGIRSNGHLMLNNAKMSKSTGNFLTLD 739

Query: 290 ELLETKKFGGRSWPAPVIRLAML----MTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
           +L+         + A   R+A+          E  +F       A + L+   +      
Sbjct: 740 DLV-------HKFGADASRIALADAGDSV---EDANFDESNANAAILRLTTLKEWCDEMV 789

Query: 340 -------TSTSKGIIDPAVLSALYN 357
                  T  +    D A  + + +
Sbjct: 790 KNQNDLRTGPADSFFDVAFDNEMND 814


>gi|146419596|ref|XP_001485759.1| hypothetical protein PGUG_01430 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 1093

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 27/145 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I         +        NG L L   KMSKS GNF+T++
Sbjct: 680 PLDIRASGKDLIPNHLTFFIYCHVALFPRKMWPKGIRSNGHLMLNNAKMSKSTGNFLTLD 739

Query: 290 ELLETKKFGGRSWPAPVIRLAML----MTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
           +L+         + A   R+A+          E  +F       A + L+   +      
Sbjct: 740 DLV-------HKFGADASRIALADAGDSV---EDANFDESNANAAILRLTTLKEWCDEMV 789

Query: 340 -------TSTSKGIIDPAVLSALYN 357
                  T  +    D A  + + +
Sbjct: 790 KNQNDLRTGPADSFFDVAFDNEMND 814


>gi|109946907|ref|YP_664135.1| leucyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123066333|sp|Q17YZ0|SYL_HELAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109714128|emb|CAJ99136.1| leuS [Helicobacter acinonychis str. Sheeba]
          Length = 806

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 13/101 (12%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGVKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSAL 616

Query: 328 TEAEILLSKWPQTSTS--KGIIDPAVLSALYNDLNTVSAIQ 366
             A   + +    + +       P    A   +LN    + 
Sbjct: 617 EGAHRFIKRLYDKANAINPTTYKPEFKEA---NLNEAEKLA 654



 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 20/145 (13%)

Query: 13  RKITEFQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            +   F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V + 
Sbjct: 15  HQNESFEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALVRYYRLHHYN--VLHP 72

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL------ACLAPTHQP 123
                        A +              T +N +   K+   L           T  P
Sbjct: 73  MGFDSFGMPAENAAIKHGIH------PKTWTYENIENMQKEFEALGFSFSKNREFATSDP 126

Query: 124 RATNHIPQMIYLIQNIILHGHAYEA 148
             T    +  + I  +   G  Y  
Sbjct: 127 NYTEF--EQQFFID-LWEKGLIYRK 148


>gi|308467348|ref|XP_003095922.1| CRE-LARS-1 protein [Caenorhabditis remanei]
 gi|308244191|gb|EFO88143.1| CRE-LARS-1 protein [Caenorhabditis remanei]
          Length = 1185

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 63/228 (27%), Gaps = 68/228 (29%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG L L   KMSKS GNF
Sbjct: 669 PIDMRASGKDLIGNHLTYLLFNHAAIW--PTDTSKWPKGIRANGHLLLNNEKMSKSTGNF 726

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           + + E +E                            F+   +        +        G
Sbjct: 727 MILEEAIEK---------------------------FSADGM--------RLSLADAGDG 751

Query: 346 IIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           + D   + A+ +     +AI  L    +  +E  +  D   +   SA            +
Sbjct: 752 LEDANFVYAMAD-----AAILRLFNMIEWIKEMIEQRDAGLLRKDSARF---------AD 797

Query: 403 KNISIAIEKLVQERLILLKMKKFSSA--------DYIRKQLES--KGF 440
           +  +  +  L++      +   F  A          IR        G 
Sbjct: 798 RVFANEMNSLIKVTEQNYEATNFKEALKTGFFEYQAIRDTYRELCAGI 845


>gi|91773332|ref|YP_566024.1| leucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121686761|sp|Q12WA2|SYL_METBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91712347|gb|ABE52274.1| Leucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 962

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 12/117 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         +K       NGF++LEG+KMSKS G  +T+N
Sbjct: 584 PVDLRSSGKDLIPNHLLFFLFHHVAIFDEDKWPRAIAINGFVSLEGKKMSKSKGPLLTLN 643

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQTSTS 343
           + +        ++ A + R+ +L +   E +   D+    +  A   + ++   S  
Sbjct: 644 DAIT-------NYGADISRMYILSSA--EQMQDADWKNSGIETARKQIERFYNFSKD 691


>gi|288958659|ref|YP_003449000.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288910967|dbj|BAI72456.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 519

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 11/132 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R +R    +     V+ +T  D+      + E  +     
Sbjct: 19  VNDVPHIGHAYTTLACDVLARFMRLDGYD-----VKFLTGTDEH---GQKVEKSAEKAGI 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A    T + ++ F +D   L   +     R T   H+  +  L   +   G  Y  +   
Sbjct: 71  APQDFTDRVSRNF-RDLVSLMNYSNDDFIRTTEPRHVKSVQALWTLLKDRGEIYLGSYAG 129

Query: 153 IFDTSSIPNYGS 164
            +       YG 
Sbjct: 130 WYSVRDEAFYGE 141



 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  ++    ++ H G+  +EG+KMSKS GN I    L
Sbjct: 261 DLHMVGKDILRFHAVYWPAFLMAA-GLQPPKRVFAH-GWWTIEGQKMSKSLGNVIAPETL 318

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           + T       +     R  +L
Sbjct: 319 VTT-------YGLDQTRYFLL 332


>gi|269986151|gb|EEZ92464.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4]
          Length = 483

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 41/117 (35%), Gaps = 11/117 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ DV  R  R         +    TD     IE+A  E      N 
Sbjct: 13  VNDKPHIGHAYTTIIADVFARWHRL---NNEKVFFLTGTDEHGGKIEKAANEK-----NK 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
               +  + +Q++     +L         R T+  H   +   I+ +   G  Y+  
Sbjct: 65  TPKELVDETSQKYKTTWEKLNISY-DKFIRTTDKSHEETVKRFIKKVFEKGDIYKGE 120



 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 48/239 (20%), Positives = 83/239 (34%), Gaps = 50/239 (20%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G ++++ H     A    AD         + +G+  ++G+KMSKS GN +   E+
Sbjct: 248 DIHLVGKEIVWFHSVIWPAMLMSADL--PLPKNILAHGWWTVDGKKMSKSIGNVVDPIEI 305

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPI----DFTVQRLTE------------------ 329
            +        + A   R  +L     +P     DF+   L E                  
Sbjct: 306 AD-------KYSADAFRYFLLRE---KPTWEDGDFSEAALKERINGELMSNLSNLVARVL 355

Query: 330 --AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
             AE    K       +  I    +   +   +  SA+  + +  R+  K  +       
Sbjct: 356 TLAEKFEGKIEGKPEIEDFIRKEEIIENFEKKDLYSALNLIFEGIRKINKYVNDK----- 410

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKF--SSADYIRKQLESKGFILED 444
                  E  K       ++    L   R+  + +K F  S+A+ I K+L   G +L D
Sbjct: 411 -------EPWKLEGKNLANVLYNSLEAIRIATIFLKPFMPSTAEKIEKKLGVNGQLLSD 462


>gi|327349323|gb|EGE78180.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 1130

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 27/160 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 714 PLDVRVSGKDLIQNHLTFCLYIHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 773

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + ++        + A   R+A       + I+       E+           L +W +  
Sbjct: 774 DAVD-------KYGADATRIAFADAG--DAIE--DANFDESVANSNILRLFTLKEWIEEV 822

Query: 342 TSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNH 379
                +      A ++ L  N       L+ LARE+ K++
Sbjct: 823 AKDNSLRTGPADAFFDKLFDN------ELNVLAREARKHY 856


>gi|313904295|ref|ZP_07837673.1| leucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470845|gb|EFR66169.1| leucyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 805

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 50/215 (23%), Positives = 72/215 (33%), Gaps = 40/215 (18%)

Query: 195 KRSTPMEPGWE-SPWGRGR---PGWHIECSAMSSHYL--GKVFDIHGGGLDLIFPH---- 244
           KR T   P W  S W   R   P  H E +      L      D + GG++ +  H    
Sbjct: 487 KRETDTMPQWAGSSWYFLRFCDP--HNENAFADKKKLEYWMPVDHYNGGMEHVTRHLLYS 544

Query: 245 ---HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
              H+            E  A        L  +G KMSKS GN I   +++       + 
Sbjct: 545 RFWHQFLYDIGEV-TTPEPYAKRTYQGMILGSDGEKMSKSKGNVIDPIDIV-------KV 596

Query: 302 WPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--TSKGIIDPAVLSAL--- 355
           + A  +R   M M  Y     +  + L   +  L +    +   +    DP + S+L   
Sbjct: 597 YGADALRTYVMFMGDYASAAPWNDESLKGCKRFLDRVAALTDIATAEKEDPKLESSLHKT 656

Query: 356 ---------YNDLNTVSAIQALHKLARESTKNHDL 381
                        NT  AI AL  L  E TK   +
Sbjct: 657 IKKVSEDIENMKFNT--AIAALMSLINEFTKAGSI 689


>gi|225460189|ref|XP_002277079.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1088

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 195 KRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGK-----VFDIHGGGLDLIFPHHENE 248
           K     +  W+  + G   P     C ++      +      FD+   G DLI  H    
Sbjct: 633 KPEQMTDEVWDFVFCGSPFPKSSDICPSVLRKMKQEFEYWYPFDVRTSGKDLIQNHLTFC 692

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I               +  NG + L   KMSKS GNF+TI + +       + + A   R
Sbjct: 693 IYNHTAILAKHHWPRGFRCNGHIMLNSEKMSKSTGNFMTIRQAI-------QEFSADATR 745

Query: 309 LAM 311
            ++
Sbjct: 746 FSL 748


>gi|68249550|ref|YP_248662.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336023|sp|Q4QLU5|SYI_HAEI8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68057749|gb|AAX88002.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 941

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   +       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATNSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|183600976|ref|ZP_02962469.1| hypothetical protein PROSTU_04591 [Providencia stuartii ATCC 25827]
 gi|188019308|gb|EDU57348.1| hypothetical protein PROSTU_04591 [Providencia stuartii ATCC 25827]
          Length = 936

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 68/195 (34%), Gaps = 32/195 (16%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 549 EYHGNSADMYLEGSDQHRGWFMSSLMLSTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGN 608

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
            I+  +++           A ++RL +  T Y   I  + + L  A     +   T+   
Sbjct: 609 TISPQDVMNKLG-------ADILRLWVASTDYTGEIAVSDEILKRAADSYRRIRNTAR-- 659

Query: 345 GIIDPAVLSALYNDLN------TVSAIQALHKLA--------RESTKN---HDLLPIFNA 387
                  L A  N  N          +  L + A        +E TK    +D L +   
Sbjct: 660 ------FLLANLNGFNPETDMVKPEEMVVLDRWAVGRALEAQKEITKAYDEYDFLSVIQR 713

Query: 388 SAHILGIEVCKEHLN 402
             H   IE+   +L+
Sbjct: 714 LMHFCSIEMGSFYLD 728


>gi|114769436|ref|ZP_01447062.1| isoleucyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114550353|gb|EAU53234.1| isoleucyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 962

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 30/188 (15%), Positives = 58/188 (30%), Gaps = 33/188 (17%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC  +       +  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 614 QSCGTNGRAPYKGVLTHGFTLDEKGMKMSKSVGNTIAPEQVI-------KQYGADILRLW 666

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI----- 365
           +    Y   +    + L        +   T           +    ND N    I     
Sbjct: 667 VAQADYTADLRIGPEILKNVADSYRRLRNTMR--------FILGNLNDFNESEKIDYSEM 718

Query: 366 -----------QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
                        L  + R+    +D   +F+       +++   + +    +     V 
Sbjct: 719 PELEQWVLHRLAELDAVVRDGYAAYDFQGVFSQVFQFATVDLSSFYFDIRKDVLYCDDVN 778

Query: 415 --ERLILL 420
             +R    
Sbjct: 779 GIKRKAAR 786


>gi|189200184|ref|XP_001936429.1| leucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187983528|gb|EDU49016.1| leucyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 1162

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 46/223 (20%), Positives = 74/223 (33%), Gaps = 36/223 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E     +  NG L L G KMSKS GNF+TI 
Sbjct: 723 PLDMRTSGKDLIQNHLTFNLYVHTAIFPKENWPRSFRVNGHLLLNGEKMSKSTGNFLTIA 782

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
             +E        + A   R+A+               +T+A    +           +  
Sbjct: 783 GAVE-------KFGADATRIALADAG---------DEITDANFEETVANSNILKLFELRK 826

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                +   +    A   + K   E  KN D++   + S  +L         +K     +
Sbjct: 827 WCEELMNEAVYVPDAAAYMEKRTTERVKNPDVIQRQSGSERLL--------FDKMFDNEM 878

Query: 410 EKLVQ---------ERLILLKMK--KFSSA-DYIRKQLESKGF 440
             L+             + LK     F+SA D+ R+  ++ G 
Sbjct: 879 NVLIHDAYTHYSNTAYKLALKSGFYDFTSARDFYREATKAAGI 921


>gi|156088817|ref|XP_001611815.1| leucyl-tRNA synthetase [Babesia bovis T2Bo]
 gi|154799069|gb|EDO08247.1| leucyl-tRNA synthetase, putative [Babesia bovis]
          Length = 1098

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 4/74 (5%)

Query: 230 VFDIHGGGLDLIFPHHENEI----AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLIF H    +    A       IE     ++  G + ++  KMSKS GNF
Sbjct: 707 PVDLRCSGKDLIFNHLTMSLFVHNAIWNDVKTIEAMPRSYLCVGHVLVDSEKMSKSKGNF 766

Query: 286 ITINELLETKKFGG 299
           +T+ + +      G
Sbjct: 767 LTLEDAIGMYTADG 780


>gi|145638215|ref|ZP_01793825.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272544|gb|EDK12451.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751370|gb|ADO81354.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 941

 Score = 53.3 bits (127), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   +       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATNSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|21226385|ref|NP_632307.1| leucyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|20904640|gb|AAM29979.1| Leucyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 971

 Score = 53.3 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 8/115 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         EK       NGF++LEG+KMSKS G  +T+ 
Sbjct: 590 PVDLRSSGKDLVPNHLLFFLFHHVALFEEEKWPKALAVNGFVSLEGQKMSKSKGPILTLE 649

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTS 343
             +        S+ A + R+ +L T    +  D+    +  A   + ++   +  
Sbjct: 650 SAVS-------SYGADITRMYILSTAEQTQDADWQKAGIDSARRQVDRFYAFAKD 697


>gi|239993317|ref|ZP_04713841.1| isoleucyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 939

 Score = 53.3 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 61/165 (36%), Gaps = 27/165 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   E+            A ++RL +
Sbjct: 580 STAMHGHAPYKEVLTHGFTVDAHGRKMSKSVGNVVAPQEVTNKLG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLS----ALYNDLNT 361
             T YR  I  + + L  A     +   T+       +   ++ AV      AL      
Sbjct: 633 ASTDYRGEIAVSDEILKRAADGYRRVRNTARFLLANLNGFSVEDAVAEEDMVALD----- 687

Query: 362 VSAI----QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              I    +AL +   E+  N+DLL +     H   IE+   +L+
Sbjct: 688 -RWIVARAKALQEELIEAYDNYDLLVVSQKLTHFCSIELGSFYLD 731


>gi|60390728|sp|Q8Q054|SYL_METMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 966

 Score = 53.3 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 47/115 (40%), Gaps = 8/115 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         EK       NGF++LEG+KMSKS G  +T+ 
Sbjct: 585 PVDLRSSGKDLVPNHLLFFLFHHVALFEEEKWPKALAVNGFVSLEGQKMSKSKGPILTLE 644

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTS 343
             +        S+ A + R+ +L T    +  D+    +  A   + ++   +  
Sbjct: 645 SAVS-------SYGADITRMYILSTAEQTQDADWQKAGIDSARRQVDRFYAFAKD 692


>gi|20090469|ref|NP_616544.1| leucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|60390729|sp|Q8TQD3|SYL_METAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19915487|gb|AAM05024.1| leucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 961

 Score = 53.3 bits (127), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 8/115 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         EK       NGF++LEG+KMSKS G  +T+ 
Sbjct: 585 PVDLRSSGKDLVPNHLLFFLFHHVALFEEEKWPRALAVNGFVSLEGQKMSKSKGPILTLE 644

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTS 343
             +        ++ A + R+ +L T    +  D+    +  A   + ++   +  
Sbjct: 645 SAVS-------AYGADITRMYILSTAEQTQDADWQKTGIDSARRQVDRFYSFAKD 692


>gi|255307553|ref|ZP_05351724.1| leucyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 806

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 43/186 (23%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSN 282
              D + GG++    H                    E   N+ +  G + ++G KMSKS 
Sbjct: 513 HPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNL-LTQGMVLMDGSKMSKSK 571

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN ++  ++++        + A   RL +L        +D++ Q +      L++  +  
Sbjct: 572 GNTVSPMDIID-------EYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLV 624

Query: 342 TSKGII---DPAV--LSALYND---------------------LNTVSAIQALHKLARES 375
                +   D     L++   D                      NT  AI AL +L  + 
Sbjct: 625 DELADVVKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNT--AISALMELINDM 682

Query: 376 TKNHDL 381
            K  +L
Sbjct: 683 YKYKEL 688



 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 13/112 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  +       V +              A +             
Sbjct: 48  IHMGHVRNYSIGDVVARFKKMEGYN--VLHPMGWDSFGLPAENAAIKHGIHPHK------ 99

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAY 146
            T +N ++  +    L       +  AT   P+     Q      + HG AY
Sbjct: 100 WTMENIEEMKEQLNLLGISYDWDKEVAT-STPEYYRFTQEIFLKFLEHGLAY 150


>gi|89892414|gb|ABD78995.1| HI0962-like protein [Haemophilus influenzae]
          Length = 601

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 206 VANRLEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 265

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 266 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 318

Query: 340 TST 342
           T+ 
Sbjct: 319 TAR 321


>gi|15669449|ref|NP_248259.1| methionyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501034|sp|Q58659|SYM_METJA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1591898|gb|AAB99269.1| methionyl-tRNA synthetase (metS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 651

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D++Y+ L+     + V +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIIYKYLKLRG--EDVIHVGGTDNHGVPITLTAEKE- 62

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +   I  K   +  +D   L        +  +  HI         +  +G+ Y
Sbjct: 63  -----GKSPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|329935921|ref|ZP_08285723.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
 gi|329304612|gb|EGG48488.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
          Length = 547

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 84/484 (17%), Positives = 142/484 (29%), Gaps = 121/484 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     +     
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANGVTPQAW- 79

Query: 95  AISIITSKNTQQF-VKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNE 151
           A  ++T      +   D             R T   H  ++   +Q++   G  Y+   E
Sbjct: 80  ADKLVTEAWEPLWEHLDIAN------DDFIRTTQKRHTDRVQEFVQDLHDKGEIYKGGYE 133

Query: 152 IIFDTSSIPNY----------GSFSRRK-----------IDEQKMGTRVPEKYHK----- 185
             +       Y          G F+ +K           + E+    R+ E   K     
Sbjct: 134 GPYCVG-CEEYKLPGELLDGEGEFAGQKLCPIHKKPVEILSEENYFFRLSEYTDKLLAHY 192

Query: 186 KNPADFILWKRSTPMEPGW-----------ESPWGRGRP-GW---HI----------ECS 220
           +   DFI  + +      +            S +  G P  W   H+            +
Sbjct: 193 EANPDFIQPESARNEVVNFVRQGLQDLSISRSTFDWGIPIPWDEKHVIYVWIDALLNYAT 252

Query: 221 AMSSHYLGKVF------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
           A+  +   + F      D+H  G D++  H     A      +          NG+L + 
Sbjct: 253 AVGYNENQEKFEETFPADVHLVGKDILRFHAVIWPAMLMA--QGLPLPGKVAANGWLMVG 310

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML----------------MTHYRE 318
           G KMSKSN   I   +L          +     R   L                   Y  
Sbjct: 311 GEKMSKSNLTGIKPQDLTT-------HFGVDAYRWYFLRAIAFGQDGSFSWEDFSARYTS 363

Query: 319 PIDFTVQRLTE-AEILLSKWPQ----TSTSKGIIDPAVLSALY-----------NDLNTV 362
            +      L      ++ K+       ST+ G  + AV + L             +L+  
Sbjct: 364 ELANDYGNLASRVAAMVGKYFDGELPASTADGEAEAAVRAGLAKAVAEADRRIGEELDFQ 423

Query: 363 SAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
             I A+    ++                 F+ +A   G E  +  L   +  A E L   
Sbjct: 424 GGILAVFDFVKQVNGYLTEQEPWKVAKTAFSDAAGAAGSEEGRARLATILYTAAEAL--- 480

Query: 416 RLIL 419
           R + 
Sbjct: 481 RAVA 484


>gi|225872764|ref|YP_002754221.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225792609|gb|ACO32699.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 887

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 42/140 (30%), Gaps = 15/140 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
           +  +    + YV     Y     H+G+ R   + D L R +  +     V +        
Sbjct: 54  EPPESGKPKYYVLEMLPYPSGQLHMGHVRNYSIGDALARYM--WMQGYNVLHPMGWDAFG 111

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N      T  N     K   RL  L+   +   T  +P+     
Sbjct: 112 LPAENAA------LKNNTPPREWTLSNIAHMHKQMDRLG-LSYDWRNEVTTCLPEYYRWN 164

Query: 137 Q----NIILHGHAYEANNEI 152
           Q     +   G AY   +++
Sbjct: 165 QWFFLRMYEKGLAYRKQSKV 184



 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 31/196 (15%), Positives = 60/196 (30%), Gaps = 44/196 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    ++   G +   G KMSKS G
Sbjct: 591 PIDQYIGGVEHAILHLIYSRFWTKVMRDLGIVKNDEPATRLFT-QGMVIKNGAKMSKSKG 649

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-- 340
           N ++  +++         + A   R  A+        +D+    +      LS+  +   
Sbjct: 650 NVVSPEDMIAR-------YGADATRMYALFAAPPDRDLDWQEDGVAGVSRFLSRVYRLAM 702

Query: 341 ------------STSKGIIDPAVLSALY-------ND------LNTVSAIQALHKLARES 375
                       + +    + A+L  L+        D       NT   I A+ +L   +
Sbjct: 703 RHAERAKQASGGAEANSATEQALLRKLHQTIRKITEDFGGRWHFNT--CIAAIMELVNTA 760

Query: 376 TKNHDLLPIFNASAHI 391
           T     +     S  +
Sbjct: 761 TAAEAAIQNGEVSDAV 776


>gi|255101684|ref|ZP_05330661.1| leucyl-tRNA synthetase [Clostridium difficile QCD-63q42]
          Length = 806

 Score = 52.9 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 43/186 (23%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSN 282
              D + GG++    H                    E   N+ +  G + ++G KMSKS 
Sbjct: 513 HPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNL-LTQGMVLMDGSKMSKSK 571

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN ++  ++++        + A   RL +L        +D++ Q +      L++  +  
Sbjct: 572 GNTVSPMDIID-------EYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLV 624

Query: 342 TSKGII---DPAV--LSALYND---------------------LNTVSAIQALHKLARES 375
                +   D     L++   D                      NT  AI AL +L  + 
Sbjct: 625 DELADVVKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNT--AISALMELINDM 682

Query: 376 TKNHDL 381
            K  +L
Sbjct: 683 YKYKEL 688



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 13/112 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  +       V +              A +             
Sbjct: 48  IHMGHVRNYSIGDVVARFKKMEGYN--VLHPMGWDSFGLPAENAAIKHGIHPHK------ 99

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAY 146
            T +N ++  +    L       +  AT   P+     Q      + HG AY
Sbjct: 100 WTMENIEEMKEQLNLLGISYDWDKEVAT-STPEYYRFTQEIFLKFLEHGLAY 150


>gi|126700138|ref|YP_001089035.1| leucyl-tRNA synthetase [Clostridium difficile 630]
 gi|255093504|ref|ZP_05322982.1| leucyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315246|ref|ZP_05356829.1| leucyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255517915|ref|ZP_05385591.1| leucyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651031|ref|ZP_05397933.1| leucyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|255656504|ref|ZP_05401913.1| leucyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|260684098|ref|YP_003215383.1| leucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260687757|ref|YP_003218891.1| leucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296450048|ref|ZP_06891810.1| leucyl-tRNA synthetase [Clostridium difficile NAP08]
 gi|296878429|ref|ZP_06902435.1| leucyl-tRNA synthetase [Clostridium difficile NAP07]
 gi|306520893|ref|ZP_07407240.1| leucyl-tRNA synthetase [Clostridium difficile QCD-32g58]
 gi|123173953|sp|Q182K8|SYL_CLOD6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115251575|emb|CAJ69408.1| Leucyl-tRNA synthetase [Clostridium difficile]
 gi|260210261|emb|CBA64530.1| leucyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260213774|emb|CBE05712.1| leucyl-tRNA synthetase [Clostridium difficile R20291]
 gi|296261056|gb|EFH07889.1| leucyl-tRNA synthetase [Clostridium difficile NAP08]
 gi|296430513|gb|EFH16354.1| leucyl-tRNA synthetase [Clostridium difficile NAP07]
          Length = 806

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 43/186 (23%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSN 282
              D + GG++    H                    E   N+ +  G + ++G KMSKS 
Sbjct: 513 HPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNL-LTQGMVLMDGSKMSKSK 571

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN ++  ++++        + A   RL +L        +D++ Q +      L++  +  
Sbjct: 572 GNTVSPMDIID-------EYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLV 624

Query: 342 TSKGII---DPAV--LSALYND---------------------LNTVSAIQALHKLARES 375
                +   D     L++   D                      NT  AI AL +L  + 
Sbjct: 625 DELADVVKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNT--AISALMELINDM 682

Query: 376 TKNHDL 381
            K  +L
Sbjct: 683 YKYKEL 688



 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 13/112 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  +       V +              A +             
Sbjct: 48  IHMGHVRNYSIGDVVARFKKMEGYN--VLHPMGWDSFGLPAENAAIKHGIHPHK------ 99

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAY 146
            T +N ++  +    L       +  AT   P+     Q      + HG AY
Sbjct: 100 WTMENIEEMKEQLNLLGISYDWDKEVAT-STPEYYRFTQEIFLKFLEHGLAY 150


>gi|305663645|ref|YP_003859933.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378214|gb|ADM28053.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 501

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 65/443 (14%), Positives = 129/443 (29%), Gaps = 113/443 (25%)

Query: 28  MYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +YV  P  Y  D  H+G+A   I+ D++ R          +     +T  D+  ++  R+
Sbjct: 7   VYVTTPIYYPNDKPHLGHAYTTILADIIARWFYLQGYNTFL-----LTGTDEHGLKLQRE 61

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIIL 141
                           + +  F      L         R T+       L++     ++ 
Sbjct: 62  AEKR---GKDPKTFVDEMSSIFRSYWDVLGIGY-NRFIRTTDK--DHEELVKYVLNKLLE 115

Query: 142 HGHAYEANNEIIFDTSSIPNY-------------GSFSRRKIDEQKMGTRVPEKYHKKNP 188
            G+ Y       + +     Y                 +R ++  +  T        +  
Sbjct: 116 KGYIYRGRYSGWYCSGCEKFYSEKEYIIENNTPICPIHKRPLEFIEEDTYFLRISEFR-- 173

Query: 189 ADFILWKRSTPMEPGWESPW----------------GRGRPG----WHIECSAMSSHYLG 228
            D++L K     +  +   +                   RP     W IE     ++ L 
Sbjct: 174 -DYVL-KILKEGDVVYPKQYAIEIASKIELEGLQDISIARPKSRVYWGIELPFDPNYTLY 231

Query: 229 KVFD-------------------------IHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
              D                         I   G D+++ H    I  S  A        
Sbjct: 232 VWIDALLNYLTGIGYLKNIEEFTNYWSGAIQLIGKDILWFH--TAIWFSILAMLGIPPPR 289

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDF 322
             + + +L ++G KM KS GN I+I + ++      R     V+R  +    +Y +  + 
Sbjct: 290 KLLVHAYLTVKGHKMGKSLGNVISIEDTIK------RYGNPEVVRFIIARIANYDKDTEV 343

Query: 323 TVQ---------------RLTEAEILLSKWPQTSTSKGIIDPAVLSALY----------N 357
           + +                L     +L+K       +  +D   +  +           N
Sbjct: 344 SWEIYDSIYNNDLLNNYGNLVRRVAVLAKRYINGNVERDLDEQFVRDIDELKNKAIENYN 403

Query: 358 DLNTVSAIQALHKLARESTKNHD 380
           +LN   AI+    +A  +    +
Sbjct: 404 NLNISEAIKYTLDIAHNTNSYLN 426


>gi|303277431|ref|XP_003058009.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460666|gb|EEH57960.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1060

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 13/89 (14%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
               FD+   G DLI  H      N +A    A+   K    +  NG L L   KMSKS 
Sbjct: 683 FWYPFDLRVSGKDLIQNHLTFSIYNHVALW--AEDESKWPRGFRTNGHLLLNNEKMSKST 740

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAM 311
           GNF T+   +E       ++ +  +R A+
Sbjct: 741 GNFKTLKAAIE-------AYSSDAMRFAL 762


>gi|125973305|ref|YP_001037215.1| isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256003786|ref|ZP_05428774.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417508|ref|ZP_06248528.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|125713530|gb|ABN52022.1| Isoleucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255992347|gb|EEU02441.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281408910|gb|EFB39168.1| isoleucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940462|gb|ADU74496.1| isoleucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 931

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 13/135 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EGRKMSKS GN I   +++       + + A ++RL +
Sbjct: 577 AVATKGQAPYKTVLTHGYVVDGEGRKMSKSLGNGIDPEDVI-------KEYGADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AI 365
             + YR  I  +   L +   +  K   T      +    DP      Y+++N +   A+
Sbjct: 630 ASSDYRTDIRISKDILKQLSEVYRKIRNTCRYILGNIYDFDPNKDMVSYDEMNELDKWAL 689

Query: 366 QALHKLARESTKNHD 380
             L+ L ++    ++
Sbjct: 690 MKLNGLIKKVNDAYE 704


>gi|332305532|ref|YP_004433383.1| isoleucyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172861|gb|AEE22115.1| isoleucyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 942

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G+KMSKS GN I   ++            A ++RL +
Sbjct: 582 SVATKGHAPYKQVLTHGFTVDGKGKKMSKSLGNTIAPQQVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T YR  I  + + L  +     +   TS 
Sbjct: 635 ASTDYRSEIAVSDEILKRSADAYRRIRNTSR 665


>gi|315638284|ref|ZP_07893465.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481631|gb|EFU72254.1| leucine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 808

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 11/103 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
           D  E  + + +  G +  +G KMSKS GN +  ++++       + + A   RL +L   
Sbjct: 558 DGDEPFSRL-LTQGMVLKDGAKMSKSKGNVVNPDDII-------KKYGADTARLFILFAA 609

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTS--TSKGIIDPAVLSAL 355
              + +++    L  A   + +    +     G ++    +AL
Sbjct: 610 PPAKELEWNDDALEGAYRFIVRLYDRALKLESGALEEISQAAL 652


>gi|257460757|ref|ZP_05625858.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442088|gb|EEV17230.1| leucyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 815

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G +  +G KMSKS GN +  ++++ET       + A   RL ML     +
Sbjct: 567 EPFERL-LTQGMVLKDGAKMSKSKGNTVDPDDIIET-------YGADTARLFMLFAAPPQ 618

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +++    +  A   LS+    + +    D 
Sbjct: 619 KELEWNDSAVEGAYKFLSRLYDRAENAYATDK 650


>gi|313672884|ref|YP_004050995.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939640|gb|ADR18832.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 636

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 13/137 (9%)

Query: 24  SNIRMYVCGPT--VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           +    YV  P   V D  HIG+A   +  DV+ R  R    +        +T  D+    
Sbjct: 2   NKPTFYVTTPIYYVNDVPHIGHAYTTVAADVISRYKRLSGYDVFF-----LTGTDEH--- 53

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLI-QNI 139
             + E  +         +  K  ++F     +L         R T ++  + +  I + +
Sbjct: 54  GQKIEMAAEKQGITPKQLADKVVERFKNLWIKLNISY-DKFIRTTDDYHKKSVQYIFKKM 112

Query: 140 ILHGHAYEANNEIIFDT 156
           + +G  Y+   E  + T
Sbjct: 113 MDNGDIYQGEYEGWYCT 129


>gi|302391369|ref|YP_003827189.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203446|gb|ADL12124.1| leucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 828

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 82/196 (41%), Gaps = 22/196 (11%)

Query: 232 DIHGGGLDLIFPHHEN------EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H          I+    AD  E    + +  G +  +G KMSKS GN 
Sbjct: 532 DQYVGGIEHAILHLLYARFFMKFISDLGIADAKEPFERL-LAQGMVLKDGAKMSKSKGNV 590

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTSTS 343
           +   E+++       ++ A   RL ML     ++ +++  + +  A   L + W  T+  
Sbjct: 591 VDPLEIID-------NYGADTARLFMLFAAPPQKDLEWDDEGVKGASRFLDRVWRVTAEY 643

Query: 344 KGIIDPAVLSALY-NDLNTVSA--IQALHKLARESTKNHDLLPIFN-ASAHILG-IEVCK 398
              I    L  L  ++L+       +++H   ++ T++ D    FN A + I+  I    
Sbjct: 644 TDQIKEIDLDNLQIDNLDKSEKELYRSVHLAIKDVTEDLDNRKQFNTAISSIMELINSLY 703

Query: 399 EHLNKNISIAIEKLVQ 414
           ++ ++     IE L+ 
Sbjct: 704 QYRDQAAEENIE-LIA 718


>gi|154149192|ref|YP_001406061.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|189082989|sp|A7I0M0|SYL_CAMHC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|153805201|gb|ABS52208.1| leucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 813

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 9/86 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  AN+ +  G +  +G KMSKS GN +  +E++E        + A   RL +L     +
Sbjct: 565 EPFANL-LTQGMVLKDGAKMSKSKGNVVDPDEIIE-------KYGADTARLFILFAAPPQ 616

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTS 343
           + +++    +  A   L++  + S +
Sbjct: 617 KELEWNDSAVEGAYKFLNRLYERSQN 642


>gi|270159965|ref|ZP_06188621.1| Isoleucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289165291|ref|YP_003455429.1| Isoleucyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269988304|gb|EEZ94559.1| Isoleucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288858464|emb|CBJ12342.1| Isoleucyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 931

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 18/167 (10%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C    +  L    DI+  G D       + +  S     +     +  H   ++ EG+K+
Sbjct: 542 CVLQQNKDLSFPADIYFEGSDQHRGWFNSSLTTSVAMYDVAPYKTVLTHGYTVDAEGKKL 601

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN++ +++L+         + A ++RL +  T YR  +  + + +        +  
Sbjct: 602 SKSKGNYVALDQLVN-------QYGADILRLWVASTDYRHEVSISDEIIKRNADAYRRIR 654

Query: 339 QTSTSKGIIDPAVLSALYNDLN-TVSAIQA--LHKLARESTKNHDLL 382
            T+          L A   D + T   ++A  L +L + + K   LL
Sbjct: 655 NTAR--------FLLANLFDFDPTKDCVEANDLLELDKWALKRCQLL 693


>gi|294890779|ref|XP_002773310.1| hypothetical protein Pmar_PMAR026560 [Perkinsus marinus ATCC 50983]
 gi|239878362|gb|EER05126.1| hypothetical protein Pmar_PMAR026560 [Perkinsus marinus ATCC 50983]
          Length = 479

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDN-GQRMTRWK 458
               ++  F  AD IR  L + G  L D       G  +T W+
Sbjct: 433 NNARRVCNFKEADRIRDLLRANGIGLMDEPGGRGKGSEVTTWR 475


>gi|256827875|ref|YP_003156603.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256577051|gb|ACU88187.1| leucyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 829

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 15/125 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                    E   N+ +  G + L G KMSKS G
Sbjct: 530 PVDQYIGGIEHAILHLLYSRFFVKALRDEGYLTHDEPFKNL-LTQGMVLLHGSKMSKSKG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++         + A  +RL  L      + +++  + +  A   L++  +   
Sbjct: 589 NVVDPDEMIA-------KYGADTVRLFCLFAAPPEKDLEWNDKGIEGASRFLNRLWRLVD 641

Query: 343 SKGII 347
               +
Sbjct: 642 ELDDV 646



 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 44/163 (26%), Gaps = 14/163 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A      I  
Sbjct: 41  PYPSGRIHMGHVRNYSIGDVVARYKRMQGFN--VFHPMGWDAFGLPAENAA------IKN 92

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM---IYLIQNIILHGHAYEAN 149
           N   +  T +N         RL       +  AT H              +  G  Y  N
Sbjct: 93  NTHPAKWTYENIAYMRAQLKRLGYSYDWDREIATCHPGYYRFEQEFFLKFLEKGLVYRKN 152

Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
             + +  S        +  +++E        E   K+    F+
Sbjct: 153 APVNWCPSCHT---VLANEQVEEGLCWRCDSEVQQKQLSQWFL 192


>gi|253581993|ref|ZP_04859217.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
 gi|251836342|gb|EES64879.1| isoleucyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
          Length = 933

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +        I  H GF+N  EG+KMSKS GN +   +++       + + A ++RL 
Sbjct: 578 SIGSTHDAPFKKILTH-GFVNDGEGKKMSKSVGNTVVPADVI-------KLYGADILRLW 629

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--A 364
                YRE +  +   L +      +   T+     +    DP      Y+ L  +   A
Sbjct: 630 CASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFDPNTDKVPYDKLMEIDKWA 689

Query: 365 IQALHKLARESTKNHDLLPIFNASAHI 391
           +  L  L R+ T+N+D    +N    I
Sbjct: 690 LNKLEILKRKVTENYDRYEFYNLFQDI 716


>gi|268324999|emb|CBH38587.1| putitive methionyl-tRNA synthetase, partial sequence [uncultured
           archaeon]
          Length = 539

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 13/117 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P V    HIG+ R  +  D+  R+LR       V ++         I+  A  E      
Sbjct: 16  PYVNGECHIGHLRTYVPADIYVRMLRKMG--HDVIFISGSDTHGTPIVLSAEAE------ 67

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI---YLIQNIILHGHAY 146
             A   + ++    F +    L      +  + TN          +++ +I  G+ Y
Sbjct: 68  GIAPEAVVARFHDHFKRIFKALNV-DFDYYGQ-TNSECNHKRTGEIVKKLIDSGYVY 122



 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 11/100 (11%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G    +H  G D+I+ H     A    A      A   + +G + ++GR  SKS G+ + 
Sbjct: 284 GATI-VHFIGTDIIYHHCIFWPAMLKGAGYSLPDAV--VASGMVKIDGRTFSKSRGDVVW 340

Query: 288 INELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR 326
            ++ LE        +    +R  ++  + + + ++F+   
Sbjct: 341 TSDFLER-------FHPDTLRYYLVAQSSHTKELNFSWNS 373


>gi|124385578|ref|YP_001027213.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450845|ref|YP_001082165.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|166230615|sp|A3MPH9|SYL_BURM7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230616|sp|A2S5J4|SYL_BURM9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124293598|gb|ABN02867.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126243715|gb|ABO06808.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10247]
          Length = 864

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQAMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|296085084|emb|CBI28499.3| unnamed protein product [Vitis vinifera]
          Length = 78

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 28/49 (57%)

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
           ++  K G RV     K+NPA+F+LWK   P E   ++PW    PG H+E
Sbjct: 17  LENNKGGERVDVDSRKRNPAEFVLWKNVRPSESSQDNPWDFKIPGRHVE 65


>gi|53725689|ref|YP_104000.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67643539|ref|ZP_00442284.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121599159|ref|YP_991720.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|166998532|ref|ZP_02264390.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254179000|ref|ZP_04885654.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202719|ref|ZP_04909082.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254208060|ref|ZP_04914410.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|60390676|sp|Q62H20|SYL_BURMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230617|sp|A1V0G7|SYL_BURMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52429112|gb|AAU49705.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121227969|gb|ABM50487.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|147746966|gb|EDK54043.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751954|gb|EDK59021.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|160694914|gb|EDP84922.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238524907|gb|EEP88337.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243065217|gb|EES47403.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 864

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQAMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGVAYKKTGTVNWD 159


>gi|327308876|ref|XP_003239129.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459385|gb|EGD84838.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 1128

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 714 PLDVRISGKDLIQNHLTFFLYIHIALFPREYWPRGVKTNGHLLLNGEKMSKSTGNFLTLR 773

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 774 DAVD-------KYGADATRIAF 788


>gi|304310516|ref|YP_003810114.1| Leucyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301796249|emb|CBL44457.1| Leucyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 815

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 61/166 (36%), Gaps = 18/166 (10%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    + +  G +  +G KMSKS GN +    L++        + A  +RL  M     
Sbjct: 557 HEPFTRL-LTQGMVLKDGAKMSKSKGNTVDPQALID-------QYGADTVRLFTMFAAPP 608

Query: 317 REPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSALYNDL--NTVSAIQAL 368
            + ++++   +  A   L +          +     +D + L++   DL   T   +Q +
Sbjct: 609 EQSLEWSDSGVEGASKFLRRLWRLVHAKALAGRPAALDTSALTSNEQDLRRKTHETLQKV 668

Query: 369 H-KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           +   AR  T N  +  +      +   E         +  A+E +V
Sbjct: 669 YDDFARRFTYNTAIAAVMELLNAVSRFEDTSPQSGAIVHEALESIV 714


>gi|121700104|ref|XP_001268317.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119396459|gb|EAW06891.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 1126

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 65/223 (29%), Gaps = 60/223 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 715 PLDVRVSGKDLIQNHLTFFLYIHIALFPREYWPRSVRANGHLLLNGEKMSKSTGNFLTLR 774

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + ++        + A   R+A                                  GI D 
Sbjct: 775 DSID-------KFGADASRIAF----------------------------ADAGDGIEDA 799

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
               A+ N  N +  +  L +   E+ K+  L                    +K     +
Sbjct: 800 NFEEAVANS-NILR-LFTLKEWIEETLKDESLRA-----------GPADSFWDKLFDNEL 846

Query: 410 EKLVQERLILLKMKKFSSA------------DYIRKQLESKGF 440
             LV+E +   +   F  A            D  R+   + G 
Sbjct: 847 NSLVRETIKHYQDTDFKLALKSGLYDLTNARDVYREAAIAAGV 889


>gi|145634139|ref|ZP_01789850.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|145268583|gb|EDK08576.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittAA]
          Length = 941

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|116747604|ref|YP_844291.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696668|gb|ABK15856.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 636

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 11/111 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV DV+ R  +         ++    +  DKI++ A           
Sbjct: 13  VNAEPHIGHAYTTIVADVMNRFHKLMGFG--TFFLTGTDEHGDKIVQAAAD------AGT 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHG 143
           A      + +  F +  ++L      H  R T   HI  + +++Q +   G
Sbjct: 65  APKEYADRISGMFKEAWSKLNISN-DHFIRTTDPEHIRVVQHILQQVYDSG 114


>gi|126731544|ref|ZP_01747350.1| isoleucyl-tRNA synthetase [Sagittula stellata E-37]
 gi|126708080|gb|EBA07140.1| isoleucyl-tRNA synthetase [Sagittula stellata E-37]
          Length = 998

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 55/179 (30%), Gaps = 16/179 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   ++        + + A ++RL 
Sbjct: 652 QACGTRGRAPYRGVLTHGFTLDEKGNKMSKSLGNTVAPEDVT-------KQYGADILRLW 704

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLNTVSA----- 364
           +  + Y   +    + L        +   T     G +         +  +         
Sbjct: 705 VAQSDYTADLRIGPEILKNVADSYRRLRNTMRYLLGAVSHFTEDQRVDAKDMPELEQYIL 764

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLILL 420
             +  L K  RE    +D   +F    +   IE+   + +        +     R    
Sbjct: 765 HRLAELDKTVREGYSKYDFQGVFQQVFNFCTIELSAFYFDIRKDALYCDGDTARRRAAR 823


>gi|325180476|emb|CCA14882.1| LeucyltRNA Synthetase (Cterminal region) LeucyltRNA Synthetase
           (Central region) LeucyltRNA Synth putative [Albugo
           laibachii Nc14]
          Length = 1089

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 9/84 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DLI  H    +       R +       +  NG + ++  KMSKS GNF+T
Sbjct: 680 PLDLRASGKDLIRNHLTMSLYHHSEIWRDDPSKWPRSFFTNGHVLVDSEKMSKSKGNFLT 739

Query: 288 INELLETKKFGGRSWPAPVIRLAM 311
           I    E        + A   R A 
Sbjct: 740 IRNCAE-------EFGADATRFAC 756


>gi|269792595|ref|YP_003317499.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100230|gb|ACZ19217.1| isoleucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 927

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 11/132 (8%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +   LG   D++  G D      +  +              +  H   ++ +GRKMSKS 
Sbjct: 550 TRKELGWPADMYLEGSDQHRGWFQTSLLTGIATRGKAPFQQVLTHGFIVDGKGRKMSKSL 609

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GN ++  E+++        + A ++RL +  T YR  +  + + L        +   T+ 
Sbjct: 610 GNVVSPQEVID-------KYGADILRLWVASTDYRGDVRISDRILKNLVESYRRIRNTAR 662

Query: 343 ----SKGIIDPA 350
               +    DPA
Sbjct: 663 FILGNLSDFDPA 674


>gi|148653689|ref|YP_001280782.1| isoleucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|148572773|gb|ABQ94832.1| Isoleucyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 946

 Score = 52.9 bits (126), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN I   + +           A ++R+ +
Sbjct: 585 SEAMYGRAPYKQVLTHGFVVDENGRKMSKSLGNIINPQDEINKTG-------ADMLRMWI 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             + YR  ++   Q    A  +  +   T           L A  +D N
Sbjct: 638 ASSDYRYEMNAGKQAFKGATDMYRRIRNTVR--------FLLANTDDFN 678


>gi|303245563|ref|ZP_07331846.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302492826|gb|EFL52691.1| leucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 837

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                    E  AN+ +  G +  +G KMSKS G
Sbjct: 533 PVDQYIGGIEHAILHLLYSRFFVKALRDLGYLTFDEPFANL-LTQGMVIKDGSKMSKSKG 591

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +R+ +L      + +D++   +  A   LS+  +  T
Sbjct: 592 NVVDPDDMIA-------KYGADTVRVFILFAAPPEKDLDWSDTGIEGASRFLSRLWRLVT 644

Query: 343 SK 344
            +
Sbjct: 645 EE 646


>gi|226293364|gb|EEH48784.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
          Length = 1118

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 27/160 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 702 PLDVRVSGKDLIQNHLTFCLYVHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 761

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + ++        + A   R+A       + I+       E+           L +W +  
Sbjct: 762 DAVD-------KYGADATRIAFADAG--DAIE--DANFEESVANSNILRLFTLKEWIEEV 810

Query: 342 TSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNH 379
                +      A ++ L  N       L+ LARE+ K++
Sbjct: 811 AKDDSLRTGPAEAFFDKLFDN------ELNVLAREARKHY 844


>gi|167721227|ref|ZP_02404463.1| leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 864

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQAMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGVAYKKTGTVNWD 159


>gi|262038685|ref|ZP_06012045.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261747237|gb|EEY34716.1| isoleucine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 932

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  + +      I  H   ++ +GRKMSKS GN I   +++E        + A ++RL +
Sbjct: 580 SIASTKDAPYKRILTHGFVMDGQGRKMSKSLGNTIVPKDIIE-------KYGADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YRE +  +   L +      +   T+ 
Sbjct: 633 SSVDYREDVRISENILQQMSDAYRRIRNTAR 663


>gi|260580052|ref|ZP_05847882.1| isoleucyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|260093336|gb|EEW77269.1| isoleucyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 941

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|254976114|ref|ZP_05272586.1| leucyl-tRNA synthetase [Clostridium difficile QCD-66c26]
          Length = 780

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 43/186 (23%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSN 282
              D + GG++    H                    E   N+ +  G + ++G KMSKS 
Sbjct: 513 HPVDQYIGGVEHAIMHLLYARWFVKAFKSMGMVDFNEPFKNL-LTQGMVLMDGSKMSKSK 571

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN ++  ++++        + A   RL +L        +D++ Q +      L++  +  
Sbjct: 572 GNTVSPMDIID-------EYGADTARLFVLFAAPPERDLDWSEQGVDGCFRFLNRVYRLV 624

Query: 342 TSKGII---DPAV--LSALYND---------------------LNTVSAIQALHKLARES 375
                +   D     L++   D                      NT  AI AL +L  + 
Sbjct: 625 DELADVVKKDVEFGELNSQDKDMRYTIHSTLKKVTADLSEKFGFNT--AISALMELINDM 682

Query: 376 TKNHDL 381
            K  +L
Sbjct: 683 YKYKEL 688



 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 33/112 (29%), Gaps = 13/112 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  +       V +              A +             
Sbjct: 48  IHMGHVRNYSIGDVVARFKKMEGYN--VLHPMGWDSFGLPAENAAIKHGIHPHK------ 99

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAY 146
            T +N ++  +    L       +  AT   P+     Q      + HG AY
Sbjct: 100 WTMENIEEMKEQLNLLGISYDWDKEVAT-STPEYYRFTQEIFLKFLEHGLAY 150


>gi|145628101|ref|ZP_01783902.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
 gi|144979876|gb|EDJ89535.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
          Length = 516

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   +       +  H   ++ +GRKMS
Sbjct: 121 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATNSKAPYKQVLTHGFTVDGQGRKMS 180

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 181 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 233

Query: 340 TST 342
           T+ 
Sbjct: 234 TAR 236


>gi|122066259|sp|P43824|SYI_HAEIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 941

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|145632348|ref|ZP_01788083.1| beta-hexosaminidase [Haemophilus influenzae 3655]
 gi|144987255|gb|EDJ93785.1| beta-hexosaminidase [Haemophilus influenzae 3655]
          Length = 941

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|88604058|ref|YP_504236.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189520|gb|ABD42517.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 690

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 24/128 (18%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      H+G+ R  +  D   R +R    E  V ++    +    I+  A +E  
Sbjct: 35  TCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEE--VVFICGSDNHGTPIVVSAEKE-- 90

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATNHIPQMIYLIQNII 140
                     I+ +    F    T++            PT   R T H      L+  +I
Sbjct: 91  ----GTTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHAR-TKH------LVSRLI 139

Query: 141 LHGHAYEA 148
             G+ Y  
Sbjct: 140 DRGYVYPK 147



 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A    A      A   + +G L ++  K SKS G  +  NE   
Sbjct: 312 HFIGQDITYHHCVFWPAMLHGAGYGTPYAV--VASGMLKIDDHKFSKSRGYVVWTNE--- 366

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
              +  +  PA  +R  +L  T + + ++F+ Q   E
Sbjct: 367 --DYLDQGLPADYLRYYLLSYTSHTKEMNFSWQLFQE 401


>gi|134280305|ref|ZP_01767016.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|237813817|ref|YP_002898268.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|254180643|ref|ZP_04887241.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|134248312|gb|EBA48395.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|184211182|gb|EDU08225.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|237505604|gb|ACQ97922.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 864

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQAMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGVAYKKTGTVNWD 159


>gi|229843977|ref|ZP_04464118.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229812971|gb|EEP48659.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 941

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRLEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|124485549|ref|YP_001030165.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|187647745|sp|A2SRE2|SYM_METLZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|124363090|gb|ABN06898.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 673

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 42/133 (31%), Gaps = 24/133 (18%)

Query: 24  SNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
           +   +  CG P    F H+G+ R  I  D   R LR       + ++    +    I+  
Sbjct: 3   NKPTVVTCGLPYTNGFCHLGHLRTYIPGDFYVRYLRRLG--DDIVFICGSDNHGTPIVVT 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC--------LAPTHQPRATNHIPQMIY 134
           A  E            ++      F      +            PT+  R        + 
Sbjct: 61  AEAEKT------TPRAVSETYHAHFDNVFKSMGIAFDRFGMTDDPTNHHRT-------VS 107

Query: 135 LIQNIILHGHAYE 147
           ++Q +I  G+ YE
Sbjct: 108 ILQTLIDRGYVYE 120



 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+I+ H     A    A     TA   + +G + ++G K SKS GN +   E  
Sbjct: 283 VHFIGSDIIYHHCVFWPAMLHGAGYQPPTAV--VASGMVTIDGEKFSKSKGNVVWTKE-- 338

Query: 293 ETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTE 329
               +  +  PA  +R  +L   +H RE +DF+ +    
Sbjct: 339 ---DYLDKGLPADYLRYYLLAYTSHTRE-LDFSWKEFQA 373


>gi|14601141|ref|NP_147669.1| leucyl-tRNA synthetase [Aeropyrum pernix K1]
 gi|6919981|sp|Q9YD97|SYL_AERPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|5104685|dbj|BAA80000.1| leucyl-tRNA synthetase [Aeropyrum pernix K1]
          Length = 959

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 69/209 (33%), Gaps = 32/209 (15%)

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHEN 247
            D++      P E         G P   +E   M   +L     D+   G DLI  H   
Sbjct: 554 FDYVFLGAGDPGEVS----RRSGIPQGLLE--EMRREFLYWYPLDMRISGKDLIPNHLVF 607

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
            I         E        NG++ + G KMSKS GNFI + + L+        W A   
Sbjct: 608 FIFHHTAIFPRELWPRAIGVNGWVLVAGEKMSKSKGNFILLRQALDW-------WGADAT 660

Query: 308 RLAMLMTHYREPID---FTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLSAL 355
           R A ++      +D   F       A  LLS+W               +  +D    S L
Sbjct: 661 RWAEVLAGADSGLDDANFEPSVADSAVSLLSQWLDFVRENYGRPARREERWVDRWFESRL 720

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPI 384
                  S I  + +L  E+     L+  
Sbjct: 721 N------STIARVTRLMEEANFKTALVEA 743


>gi|109899483|ref|YP_662738.1| isoleucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123360479|sp|Q15R04|SYI_PSEA6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|109701764|gb|ABG41684.1| Isoleucyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 942

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G+KMSKS GN +   ++            A ++RL +
Sbjct: 582 SVATKGHAPYKQVLTHGFTVDGKGKKMSKSLGNTVAPQQVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T YR  I  + + L  +     +   TS 
Sbjct: 635 ASTDYRSEIAVSDEILKRSADAYRRIRNTSR 665


>gi|331000453|ref|ZP_08324128.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
 gi|329571785|gb|EGG53465.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
          Length = 877

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 42/137 (30%), Gaps = 15/137 (10%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + YVC    Y     H+G+ R   + DVLYR LR            N+          
Sbjct: 38  KPKFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRG--------MNVMTPMGWDSFG 89

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----N 138
              E+ +I    A +  T  N          L  LA       T   P      Q     
Sbjct: 90  LPAENAAIAKKVAPAKWTYDNIADMKAQMEPLG-LAFDWSREVTTCKPDYYRWNQWMFLK 148

Query: 139 IILHGHAYEANNEIIFD 155
           ++  G AY     + +D
Sbjct: 149 MLEKGVAYRKTQTVNWD 165


>gi|303257887|ref|ZP_07343896.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859230|gb|EFL82312.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 877

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 42/137 (30%), Gaps = 15/137 (10%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + YVC    Y     H+G+ R   + DVLYR LR            N+          
Sbjct: 38  KPKFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRG--------MNVMTPMGWDSFG 89

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----N 138
              E+ +I    A +  T  N          L  LA       T   P      Q     
Sbjct: 90  LPAENAAIAKKVAPAKWTYDNIADMKAQMEPLG-LAFDWSREVTTCKPDYYRWNQWMFLK 148

Query: 139 IILHGHAYEANNEIIFD 155
           ++  G AY     + +D
Sbjct: 149 MLEKGVAYRKTQTVNWD 165


>gi|257466462|ref|ZP_05630773.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917619|ref|ZP_07913859.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691494|gb|EFS28329.1| isoleucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 931

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 23/176 (13%)

Query: 257 RIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
            +     I  H GF+N   G KMSKS GN +   +++       + + A ++RL      
Sbjct: 583 GVAPFKKILTH-GFVNDGKGEKMSKSKGNVVAPEKII-------KQYGADILRLWCASVD 634

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           YRE +  +   + +      +   T+     +    DP   +  Y DL  +     LHKL
Sbjct: 635 YREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPKKDAVPYQDLLEIDKWA-LHKL 693

Query: 372 ------ARESTKNHDLLPIFNASAHILGIEVCKEHLN---KNISIAIEKLVQERLI 418
                   ES + ++   +F    +  GI++   +L+     +    E  +  R  
Sbjct: 694 EMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIKDRLYTEKEDSIARRSA 749


>gi|257452605|ref|ZP_05617904.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059145|ref|ZP_07923630.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684821|gb|EFS21656.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 931

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 67/176 (38%), Gaps = 23/176 (13%)

Query: 257 RIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
            +     I  H GF+N   G KMSKS GN +   +++       + + A ++RL      
Sbjct: 583 GVAPFKKILTH-GFVNDGKGEKMSKSKGNVVAPEKII-------KQYGADILRLWCASVD 634

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           YRE +  +   + +      +   T+     +    DP   +  Y DL  +     LHKL
Sbjct: 635 YREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPKKDAVPYQDLLEIDKWA-LHKL 693

Query: 372 ------ARESTKNHDLLPIFNASAHILGIEVCKEHLN---KNISIAIEKLVQERLI 418
                   ES + ++   +F    +  GI++   +L+     +    E  +  R  
Sbjct: 694 EMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLDIIKDRLYTEKEDSIARRSA 749


>gi|315638127|ref|ZP_07893310.1| isoleucine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481807|gb|EFU72428.1| isoleucine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 926

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 14/147 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ +G+KMSKS GN I          +  +++   ++RL +
Sbjct: 595 SVALRGCTPYKNVLTHGFTIDEKGQKMSKSKGNTI-------APDYVAKTYGVEILRLWV 647

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN-DLNTVSAI----- 365
            ++ Y   +  +   L +      K   T     + +   L  + + D + +        
Sbjct: 648 FLSDYSTDLKISENILKQVSEQYRKIRNTIRFL-LANTNDLDNMQDADFSFIDKWILTRA 706

Query: 366 QALHKLARESTKNHDLLPIFNASAHIL 392
             + K + E+  N++    FNA  + L
Sbjct: 707 SRVFKTSEEAFLNYEFAKGFNALLNFL 733


>gi|310827210|ref|YP_003959567.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
 gi|308738944|gb|ADO36604.1| hypothetical protein ELI_1618 [Eubacterium limosum KIST612]
          Length = 882

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 49/198 (24%), Positives = 78/198 (39%), Gaps = 30/198 (15%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I            A+++IH    + +GRKMSKS GN I   E+
Sbjct: 481 DVLVTGYDIIFFWVARMIFMGLYNMGEVPFADVYIHGLIRDSQGRKMSKSLGNGIDPLEI 540

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTEAEILLSKWPQTST-----S 343
           +E        + A  +R +++  +       I +  ++L  +   L+K    +       
Sbjct: 541 IE-------QFSADALRFSIITGN--SAGNDIRWQDEKLEASRNFLNKIWNAARFVLMNL 591

Query: 344 KGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFNASAHILGIEVCK---E 399
              I     +AL N  NT   I   ++ + R+ T+N D           LGI   K    
Sbjct: 592 DENIMDQQDAALANLENTDKWILSRMNDVVRDVTQNMDKYE--------LGIAAQKVYDF 643

Query: 400 HLNKNISIAIEKLVQERL 417
             N+     IE LV+ RL
Sbjct: 644 AWNEYCDWYIE-LVKPRL 660


>gi|332970222|gb|EGK09215.1| isoleucine--tRNA ligase [Psychrobacter sp. 1501(2011)]
          Length = 946

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN I   + +           A ++R+ +
Sbjct: 585 SEAMYGRAPYKQVLTHGFVVDENGRKMSKSLGNIINPQDEINKTG-------ADMLRMWI 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             + YR  ++   Q    A  +  +   T           L A  +D N
Sbjct: 638 ASSDYRYEMNAGKQAFKGATDMYRRIRNTVR--------FLLANTDDFN 678


>gi|150403248|ref|YP_001330542.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|187647747|sp|A6VIW5|SYM_METM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150034278|gb|ABR66391.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 663

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 39/123 (31%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D+  R LR    E  V +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIYTRYLRLKGEE--VVHVGGTDNHGVPITLTAEREG 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
                      I  +       D   L     T     ++ HI         +  +G+ Y
Sbjct: 64  VKPI------DIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|221505841|gb|EEE31486.1| leucyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 876

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TA 262
           + P G   P  H++       Y     D+   G DLIF H    +               
Sbjct: 478 DLPKGSTIPAEHLKRMRNEFEY-WYPLDLRVSGKDLIFNHLTFSLYSHAAIWPHRPDLWP 536

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
             ++ NG + ++ +KMSKS GNFI+I +       G + + A  +R+A+
Sbjct: 537 RAFVCNGHIMVDAQKMSKSLGNFISIED-------GIKEFTADAMRVAL 578


>gi|303244973|ref|ZP_07331297.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484684|gb|EFL47624.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 691

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D++ R L+    +K V +V    +    I   A +E 
Sbjct: 13  YTNGP-----LHLGHARSTYIPADIMRRYLKL--NKKDVIHVGGTDNHGVPITITAEKEG 65

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
                      I +K   +  +D   L     ++    ++ HI         +  +G+ Y
Sbjct: 66  VK------PEDIVNKYHNEIKRDLDNLNIEFDSYGKTHSDIHIKTAQEFYLKLKENGYIY 119

Query: 147 EAN 149
           E  
Sbjct: 120 EKE 122


>gi|51892369|ref|YP_075060.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826163|sp|Q67Q27|SYI_SYMTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|51856058|dbj|BAD40216.1| isoleucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 938

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 7/87 (8%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D       +  H   ++ +GRKMSKS GN +   +++       + + A ++RL +  
Sbjct: 578 ARDGKPPYKAVLTHGFTVDEQGRKMSKSLGNVVDPADVI-------KRYGADILRLWVAS 630

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT 340
           T YR  +  +   L +      K   T
Sbjct: 631 TDYRHDMALSENILKQVADAYRKIRNT 657


>gi|51891582|ref|YP_074273.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|60390687|sp|Q67SB4|SYL_SYMTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51855271|dbj|BAD39429.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 861

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  A + +  G +  +G KMSKS GN ++  E++         + A  +RL ++      
Sbjct: 571 EPFARL-LTQGMVLKDGSKMSKSKGNTVSPEEMIA-------KYGADAVRLFIMFAAPPE 622

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
             +D++   +  A   ++++ +   S 
Sbjct: 623 RDLDWSDAGIEGAARFVNRFYRMVVSA 649


>gi|187649786|sp|Q2FU77|SYM_METHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 664

 Score = 52.5 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 24/128 (18%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      H+G+ R  +  D   R +R    E  V ++    +    I+  A +E  
Sbjct: 9   TCGLPYTNGPCHLGHLRTYVPADFYVRFMRRKGEE--VVFICGSDNHGTPIVVSAEKE-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATNHIPQMIYLIQNII 140
                     I+ +    F    T++            PT   R T H      L+  +I
Sbjct: 65  ----GTTPRQISERYHTHFSDTFTKMQVHFDHFGMTDDPTTHAR-TKH------LVSRLI 113

Query: 141 LHGHAYEA 148
             G+ Y  
Sbjct: 114 DRGYVYPK 121



 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A    A      A   + +G L ++  K SKS G  +  NE   
Sbjct: 286 HFIGQDITYHHCVFWPAMLHGAGYGTPYAV--VASGMLKIDDHKFSKSRGYVVWTNE--- 340

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
              +  +  PA  +R  +L  T + + ++F+ Q   E
Sbjct: 341 --DYLDQGLPADYLRYYLLSYTSHTKEMNFSWQLFQE 375


>gi|226349595|ref|YP_002776709.1| hypothetical protein ROP_pROB01-03580 [Rhodococcus opacus B4]
 gi|226245510|dbj|BAH55857.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 251

 Score = 52.5 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 10/109 (9%)

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAV 351
                 +R  +L THYR+    T++ + +A  LL +W Q                I  A 
Sbjct: 137 GHDPLTLRCVLLSTHYRQQAPPTMETIADAARLLHRWRQRVADWSTHISVPMPADIIEAA 196

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLL-PIFNASAHILGIEVCKE 399
             A   +L+  + +  +  L  ++          F     +L  ++ ++
Sbjct: 197 YRAFDRNLDVPAVLDLMRHLESDAAIAPGAKFETFIHLDRVLAFDLTRD 245


>gi|260581957|ref|ZP_05849753.1| isoleucyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095150|gb|EEW79042.1| isoleucyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 941

 Score = 52.5 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|126462356|ref|YP_001043470.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166232830|sp|A3PK32|SYR_RHOS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|126104020|gb|ABN76698.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 580

 Score = 52.5 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 127/393 (32%), Gaps = 80/393 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L RLL Y        Y  N       ++ R+  E      
Sbjct: 133 PT--GPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLARSAFE----RY 186

Query: 93  NDAISIITSKNTQQFVKDT-----TRLACLAPT-----------HQPR--ATNHIPQMIY 134
            +A  +        +  D        L                  + R  AT  + QMI 
Sbjct: 187 REAHGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLKEVREFATEMMMQMIR 246

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGS----FSRRKIDEQKMGTRVPEKYHKKNPAD 190
             +++   G       ++     ++   G       R K  +      V E    K P D
Sbjct: 247 --EDLAALG----VEMDVYSSEKALYGTGKIEAALDRLKEMDLIY-EGVLEPPKGKTPED 299

Query: 191 F-----ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HG 235
           +      L++ +   +   + P  +    W      ++ HY        ++ DI    HG
Sbjct: 300 WEPREQTLFRSTAHGDDV-DRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHG 358

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLE 293
           G +  +      + A +  +          I    L   G   KMSK  G ++T+ +++E
Sbjct: 359 GYVKRM------KAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVE 412

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTS 341
                       V R  ML       +DF   ++ E            A   ++   + +
Sbjct: 413 QVGT-------DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKA 465

Query: 342 TSKG--IIDPAVLSALYNDLNTVSAIQALHKLA 372
             +G  + D  + +A  + L+  + I  + KLA
Sbjct: 466 REQGMDVSDATLATADLDRLDHPAEIALIAKLA 498


>gi|309973536|gb|ADO96737.1| Isoleucyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 941

 Score = 52.5 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|319897524|ref|YP_004135721.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433030|emb|CBY81401.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 924

 Score = 52.5 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 529 VANRPEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 588

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 589 KSIGNIVTPQEVMD-------EFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 641

Query: 340 TST 342
           T+ 
Sbjct: 642 TAR 644


>gi|145640631|ref|ZP_01796214.1| isoleucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145274557|gb|EDK14420.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 941

 Score = 52.5 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|15612517|ref|NP_224170.1| leucyl-tRNA synthetase [Helicobacter pylori J99]
 gi|6919983|sp|Q9ZJ63|SYL_HELPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4156066|gb|AAD07021.1| LEUCYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 806

 Score = 52.5 bits (125), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +  +G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKDGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A  +RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAVRLFILFAAPPAKELEWNDNALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|296106520|ref|YP_003618220.1| isoleucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295648421|gb|ADG24268.1| isoleucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 931

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 18/134 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +     +     +  H   ++ EG+K+SKS GN++ +++L+           A ++RL +
Sbjct: 575 AVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKLVNQHG-------ADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--L 368
             T YR  +  + + +        +   T+          L A   D N     I+A  L
Sbjct: 628 ASTDYRHEVSISEEIIKRNADAYRRIRNTAR--------FLLANLFDFNPASDCIEAKEL 679

Query: 369 HKLARESTKNHDLL 382
            +L R + K   LL
Sbjct: 680 LELDRWALKRCQLL 693


>gi|289192151|ref|YP_003458092.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288938601|gb|ADC69356.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 650

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D++Y+ L+     + V +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIMYKYLKLKG--EDVIHVGGTDNHGVPITLTAEKE- 62

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +   I  K   +  +D   L        +  +  HI         +  +G+ Y
Sbjct: 63  -----GKSPEEIVEKYHNEIKEDLDLLGIEFDAFGKTHSQIHIETAQEFYLKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|301105601|ref|XP_002901884.1| leucyl-tRNA synthetase, cytoplasmic, putative [Phytophthora
           infestans T30-4]
 gi|262099222|gb|EEY57274.1| leucyl-tRNA synthetase, cytoplasmic, putative [Phytophthora
           infestans T30-4]
          Length = 1084

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N        D   K    +  NG + ++G+KMSKS GNF
Sbjct: 678 PVDVRASGKDLIRNHLTMCLYNHAEIWR--DDPSKWPRGFFTNGHVQVDGKKMSKSLGNF 735

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ +           + A   R A 
Sbjct: 736 LTLKDC-------ATEFGADATRFAC 754


>gi|307609730|emb|CBW99241.1| isoleucyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 931

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 18/134 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +     +     +  H   ++ EG+K+SKS GN++ +++L+           A ++RL +
Sbjct: 575 AVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKLVNQHG-------ADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--L 368
             T YR  +  + + +        +   T+          L A   D N     I+A  L
Sbjct: 628 ASTDYRHEVSISEEIIKRNADAYRRIRNTAR--------FLLANLFDFNPASDCIEAKEL 679

Query: 369 HKLARESTKNHDLL 382
            +L R + K   LL
Sbjct: 680 LELDRWALKRCQLL 693


>gi|301154981|emb|CBW14444.1| isoleucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 941

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|90022948|ref|YP_528775.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122995879|sp|Q21FG6|SYL_SACD2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89952548|gb|ABD82563.1| leucyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 819

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 37/140 (26%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRL 327
           G +  +G KMSKS GN +   +L++T       + A  +RL  M      + +++T   +
Sbjct: 569 GMVLKDGTKMSKSKGNTVDPEDLIKT-------YGADTVRLFSMFAAPPEQSLEWTDSGV 621

Query: 328 TEAEILLSKWPQT------STSKGIIDP---------------AVLSALYND------LN 360
             A   L K  +       + S G ID                  +S + +D       N
Sbjct: 622 EGAFRFLKKLWKAVASHLEAGSAGEIDANSLDEQQKALRRKTHETISKVSDDYGRRQTFN 681

Query: 361 TVSAIQALHKLARESTKNHD 380
           T  AI A+ +L  E T++ D
Sbjct: 682 T--AIAAVMELLNEITRSAD 699


>gi|54296958|ref|YP_123327.1| isoleucyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|81822616|sp|Q5X6G6|SYI_LEGPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53750743|emb|CAH12150.1| Isoleucyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 931

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 18/134 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +     +     +  H   ++ EG+K+SKS GN++ +++L+           A ++RL +
Sbjct: 575 AVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKLVNQHG-------ADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--L 368
             T YR  +  + + +        +   T+          L A   D N     I+A  L
Sbjct: 628 ASTDYRHEVSISEEIIKRNADAYRRIRNTAR--------FLLANLFDFNPASDCIEAKEL 679

Query: 369 HKLARESTKNHDLL 382
            +L R + K   LL
Sbjct: 680 LELDRWALKRCQLL 693


>gi|157374333|ref|YP_001472933.1| isoleucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
 gi|189082334|sp|A8FSI2|SYI_SHESH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157316707|gb|ABV35805.1| isoleucyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
          Length = 940

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y G   D++  G D       + +  S   +       +  H   ++  GRKMSKS GN
Sbjct: 553 EYQGHEIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGNGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I    +            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILKRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DP       NDL  V  + AL +    R +    +L+  +  
Sbjct: 666 LANINGFDPV------NDLVAVEEMVALDRWVVRRAAALQEELIEAYEQ 708


>gi|15603527|ref|NP_246601.1| isoleucyl-tRNA synthetase [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|81636547|sp|Q9CKF7|SYI_PASMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12722068|gb|AAK03746.1| IleS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 932

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN +T  E+++        +   ++RL +
Sbjct: 578 STATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMD-------KFGGDILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  + + L  A     +   T+     +    DP        DL     +  
Sbjct: 631 ASTDYTGEISVSDEILKRAADAYRRIRNTARFLLANLNGFDPKR------DLVKPEEMMV 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|329122984|ref|ZP_08251555.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|327471915|gb|EGF17355.1| isoleucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 941

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|296284542|ref|ZP_06862540.1| arginyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 581

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 62/346 (17%), Positives = 117/346 (33%), Gaps = 77/346 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL          Y  N       ++ R+        +
Sbjct: 137 PT--GPMHMGHCRGAVVGDALASLLDATGHSVTREYYVNDAGGQVDVLARSAHVRYREAL 194

Query: 93  NDAISIITS-------------KNTQQFVKDTTR------LACLAPTHQPRATNHIPQMI 133
            +++  I                  ++F  +         L    P  +PRA   +  M+
Sbjct: 195 GESVGEIPEGLYPGEYLIPVGKALAEEFGDEYAAAPESEWL----PLFRPRA---VAAMM 247

Query: 134 YLIQNIILH-GHAYEANNEIIFDTSSIPNYGSFSRRKI---DEQKMGTRVPEKYHKKNPA 189
            LI+  +   G A+    ++    + +   G  +  +    ++  +     EK   K P 
Sbjct: 248 DLIRADLAKLGIAH----DVFASEAELQAAGKPAEAEAWLREQGLVYDGELEKPKGKTPE 303

Query: 190 DF-----ILWKRSTPMEPGWESPWGRGRPGW---------HIECSAMSSHYLGKVFDI-- 233
           D+      L++ +   +   + P  +    W         H++ +  +        DI  
Sbjct: 304 DWEPVELPLFRSTQFGDDQ-DRPIKKSNGSWTYFGADLAYHMQKAENADAL----IDIWG 358

Query: 234 --HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITIN 289
             H G +  I        A S    +        +    L  +G   KMSK +GNF+T+ 
Sbjct: 359 ADHAGTVKRI---KAAVAALSQGQGKPIPFDVKLVQMVQLMRDGEPVKMSKRSGNFVTLA 415

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEI 332
           ++++            V+R  ML    R+P   +DF   ++ EA  
Sbjct: 416 DVVDEVGK-------DVVRFTMLT---RKPEAQMDFDFAKVVEASK 451


>gi|118386473|ref|XP_001026355.1| leucyl-tRNA synthetase family protein [Tetrahymena thermophila]
 gi|89308122|gb|EAS06110.1| leucyl-tRNA synthetase family protein [Tetrahymena thermophila
           SB210]
          Length = 1041

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 9/84 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+ G   DL+  H    I       + E       +  NG++ ++G KMSK  GNF T
Sbjct: 633 PLDLRGSAKDLVKNHLTMCIFNHAAIWKDEPNMWPRSFFVNGYMLVDGEKMSKQKGNFFT 692

Query: 288 INELLETKKFGGRSWPAPVIRLAM 311
           + +++         + A   R A+
Sbjct: 693 LKDIVSM-------YGADACRFAL 709


>gi|41615033|ref|NP_963531.1| leucyl-tRNA synthetase [Nanoarchaeum equitans Kin4-M]
 gi|48428516|sp|P61760|SYL_NANEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|40068757|gb|AAR39092.1| NEQ239 [Nanoarchaeum equitans Kin4-M]
          Length = 977

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI     DLI  H    I          K       +GF+ + G KMSKS GNFITI 
Sbjct: 652 PVDIRFSAQDLIANHLVFYIFHHVAIFPESKWPRGIAVSGFVTVNGEKMSKSKGNFITIR 711

Query: 290 ELLETKKFGGRSWPAPVIRLA 310
           E +       + +    +RLA
Sbjct: 712 EAI-------QRYGRDAVRLA 725


>gi|77463500|ref|YP_353004.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|109895030|sp|Q3J281|SYR_RHOS4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77387918|gb|ABA79103.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 583

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 127/393 (32%), Gaps = 80/393 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L RLL Y        Y  N       ++ R+  E      
Sbjct: 136 PT--GPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLARSAFE----RY 189

Query: 93  NDAISIITSKNTQQFVKDT-----TRLACLAPTH-----------QPR--ATNHIPQMIY 134
            +A  +        +  D        L                  + R  AT  + QMI 
Sbjct: 190 REAHGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIR 249

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGS----FSRRKIDEQKMGTRVPEKYHKKNPAD 190
             +++   G       ++     ++   G       R K  +      V E    K P D
Sbjct: 250 --EDLAALG----VEMDVYSSEKALYGTGKIEAALDRLKEMDLIY-EGVLEPPKGKTPED 302

Query: 191 F-----ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HG 235
           +      L++ +   +   + P  +    W      ++ HY        ++ DI    HG
Sbjct: 303 WEPREQTLFRSTAHGDDV-DRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHG 361

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLE 293
           G +  +      + A +  +          I    L   G   KMSK  G ++T+ +++E
Sbjct: 362 GYVKRM------KAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVE 415

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTS 341
                       V R  ML       +DF   ++ E            A   ++   + +
Sbjct: 416 QVGT-------DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKA 468

Query: 342 TSKG--IIDPAVLSALYNDLNTVSAIQALHKLA 372
             +G  + D  + +A  + L+  + I  + KLA
Sbjct: 469 REQGMDVSDATLATADLDRLDHPAEIALIAKLA 501


>gi|325115938|emb|CBZ51492.1| Leucyl-tRNA synthetase 2, related [Neospora caninum Liverpool]
          Length = 1160

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DLIF H    +                 ++ NG + ++ +KMSKS GNFIT
Sbjct: 742 PLDLRVSGKDLIFNHLTFSLYSHVAMWPHRPDLWPKAFVCNGHVMVDAQKMSKSVGNFIT 801

Query: 288 INELLETKKFGGRSWPAPVIRLAM 311
           I +       G + + A  +R+A+
Sbjct: 802 IQD-------GIKEFTADAMRVAL 818


>gi|315634925|ref|ZP_07890207.1| isoleucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476477|gb|EFU67227.1| isoleucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 940

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 545 VANRPEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMS 604

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 605 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 657

Query: 340 TST 342
           T+ 
Sbjct: 658 TAR 660


>gi|148828139|ref|YP_001292892.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166200213|sp|A5UIA3|SYI_HAEIG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148719381|gb|ABR00509.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 941

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|332558380|ref|ZP_08412702.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276092|gb|EGJ21407.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 580

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 127/393 (32%), Gaps = 80/393 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L RLL Y        Y  N       ++ R+  E      
Sbjct: 133 PT--GPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLARSAFE----RY 186

Query: 93  NDAISIITSKNTQQFVKDT-----TRLACLAPTH-----------QPR--ATNHIPQMIY 134
            +A  +        +  D        L                  + R  AT  + QMI 
Sbjct: 187 REAHGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIR 246

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGS----FSRRKIDEQKMGTRVPEKYHKKNPAD 190
             +++   G       ++     ++   G       R K  +      V E    K P D
Sbjct: 247 --EDLAALG----VEMDVYSSEKALYGTGKIEAALDRLKEMDLIY-EGVLEPPKGKTPED 299

Query: 191 F-----ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HG 235
           +      L++ +   +   + P  +    W      ++ HY        ++ DI    HG
Sbjct: 300 WEPREQTLFRSTAHGDDV-DRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHG 358

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLE 293
           G +  +      + A +  +          I    L   G   KMSK  G ++T+ +++E
Sbjct: 359 GYVKRM------KAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVE 412

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTS 341
                       V R  ML       +DF   ++ E            A   ++   + +
Sbjct: 413 QVGT-------DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKA 465

Query: 342 TSKG--IIDPAVLSALYNDLNTVSAIQALHKLA 372
             +G  + D  + +A  + L+  + I  + KLA
Sbjct: 466 REQGMDVSDATLATADLDRLDHPAEIALIAKLA 498


>gi|167565991|ref|ZP_02358907.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 922

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 11/102 (10%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++  ++  T+        A V+RL + 
Sbjct: 579 CAADGRAPFKAILTHGFVVDGSGRKMSKSLGNTVSPQQIAGTRG-------ADVLRLWIA 631

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPA 350
            T Y   +  + + L        +   T      +    DPA
Sbjct: 632 STDYAAEMSISDEILDRVAETYRRIRNTVRFLLQNVADFDPA 673


>gi|134046374|ref|YP_001097859.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|187647746|sp|A4FZL1|SYM_METM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|132663999|gb|ABO35645.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 663

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 39/123 (31%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D+  R LR    E  V +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIYTRYLRLKGEE--VIHVGGTDNHGVPITLTAEREG 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
                      I  +       D   L     T     ++ HI         +  +G+ Y
Sbjct: 64  VKPI------DIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|37524595|ref|NP_927939.1| isoleucyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|81420332|sp|Q7N8X2|SYI_PHOLL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|36784019|emb|CAE12886.1| isoleucine tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 937

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 54/152 (35%), Gaps = 17/152 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   DI+  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 550 EFQGNAADIYLEGSDQHRGWFMSSLMISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGN 609

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I+  ++++          A ++RL +  T Y   I  + + L  +     +   T+   
Sbjct: 610 TISPQDVMDKLG-------ADILRLWVASTDYTGEIAVSDEILKRSADAYRRIRNTARFL 662

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
             +    DP   S           +  L + A
Sbjct: 663 LANLNGFDPEQHSV------KPEEMAVLDRWA 688


>gi|229829031|ref|ZP_04455100.1| hypothetical protein GCWU000342_01116 [Shuttleworthia satelles DSM
           14600]
 gi|229792194|gb|EEP28308.1| hypothetical protein GCWU000342_01116 [Shuttleworthia satelles DSM
           14600]
          Length = 810

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 56/167 (33%), Gaps = 28/167 (16%)

Query: 241 IFPHH-ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
            F HH   +I Q  C    E  A        L  +G KMSKS GN I   +++       
Sbjct: 551 RFWHHFLYDIDQVGC---PEPYAKRTYQGLILGPDGEKMSKSKGNVIDPLDIV------- 600

Query: 300 RSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK------WPQTSTSKGIIDPAVL 352
           R + A  +R   M M  Y     ++ + L      L +                I+ ++ 
Sbjct: 601 RDYGADTLRTYVMFMGDYASAAPWSDESLNGCRRFLDRVSRFDEIATLDRENPAIEVSLH 660

Query: 353 SAL---YND-----LNTVSA--IQALHKLARESTKNHDLLPIFNASA 389
            A+    ND      NT  A  +   ++  +      D + IF    
Sbjct: 661 KAIKKVSNDIENMKFNTAIATLMALTNEFQKAGAVTRDDVRIFLQLL 707


>gi|295664655|ref|XP_002792879.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226278400|gb|EEH33966.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 1118

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 31/162 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 702 PLDVRVSGKDLIQNHLTFCLYVHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 761

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + ++        + A   R+A       + I+       E+           L +W +  
Sbjct: 762 DAVD-------KYGADATRIAFADAG--DAIE--DANFEESVANSNILRLFTLKEWIEEV 810

Query: 342 TSKGIID----PAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                +      A    L+++         L+ LARE+ K++
Sbjct: 811 AKDDSLRTGPADAFFDKLFDN--------ELNVLAREARKHY 844


>gi|198282759|ref|YP_002219080.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218667702|ref|YP_002424955.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
 gi|198247280|gb|ACH82873.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218519915|gb|ACK80501.1| leucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC 23270]
          Length = 821

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 18/170 (10%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-M 313
               E      +  G +  +G KMSKS GN +    L++        + A   RL +L  
Sbjct: 561 GAHDEPF-RHLLTQGMVLKDGSKMSKSKGNTVDPQGLIDR-------YGADTARLFILFA 612

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI---QALHK 370
               + ++++   +  A   L+++ +     G   PAV + L     +  A+   +A+H+
Sbjct: 613 APPEQHLEWSDSAVEGAYRFLNRFWRLVHEYGATPPAVPAEL-----SAEAVDLRRAVHQ 667

Query: 371 LARESTKNHDLLPIFN-ASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
                ++N D    FN A A I+ +      +  +    +  ++ E L  
Sbjct: 668 CIDRVSRNMDGRYHFNVAIAAIMELTNSLMKVPADAPADLRAVLGEGLRA 717


>gi|157415352|ref|YP_001482608.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047144|sp|A8FME4|SYL_CAMJ8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157386316|gb|ABV52631.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|315932229|gb|EFV11172.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 809

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-IFVKDTLN 752


>gi|295698742|ref|YP_003603397.1| isoleucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157336|gb|ADD79781.1| isoleucyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 944

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN IT  E+++        + A V+RL +  ++YR+ I+ + + 
Sbjct: 591 HGFVVDEHGRKMSKSVGNIITPKEIID-------EFGADVLRLWVASSNYRKEINISEKI 643

Query: 327 LTEAEILLSKWPQT 340
           +        K   T
Sbjct: 644 IAGTIDHYRKIRNT 657


>gi|288818060|ref|YP_003432408.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787460|dbj|BAI69207.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751661|gb|ADO45144.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 490

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 44/126 (34%), Gaps = 15/126 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R         +    TD     I+++ QE        
Sbjct: 12  VNDVPHIGHAYTTVAADVLARFYRQRGY---SVFFLTGTDEHGLKIQKSAQER-----GI 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANN 150
           +   +  +N + F K    +         R T+   + I  +Q +      +G  Y+   
Sbjct: 64  SPKELADQNAENFKKLWKFMNISY-DRFIRTTD--EEHIKFVQEVFVKSYENGDIYKGEY 120

Query: 151 EIIFDT 156
           E  +  
Sbjct: 121 EGWYCV 126


>gi|319775102|ref|YP_004137590.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|317449693|emb|CBY85900.1| isoleucyl-tRNA synthetase [Haemophilus influenzae F3047]
          Length = 924

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 529 VANRPEFNGQNIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 588

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 589 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 641

Query: 340 TST 342
           T+ 
Sbjct: 642 TAR 644


>gi|225683976|gb|EEH22260.1| leucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
          Length = 1130

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 58/162 (35%), Gaps = 31/162 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 714 PLDVRVSGKDLIQNHLTFCLYVHAALFPREYWPRSIRVNGHLLLNGEKMSKSTGNFLTLK 773

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + ++        + A   R+A       + I+       E+           L +W +  
Sbjct: 774 DAVD-------KYGADATRIAFADAG--DAIE--DANFEESVANSNILRLFTLKEWIEEV 822

Query: 342 TSKGIID----PAVLSALYNDLNTVSAIQALHKLARESTKNH 379
                +      A    L+++         L+ LARE+ K++
Sbjct: 823 AKDDSLRTGPADAFFDKLFDN--------ELNVLAREARKHY 856


>gi|254373879|ref|ZP_04989361.1| isoleucine-tRNA ligase [Francisella novicida GA99-3548]
 gi|151571599|gb|EDN37253.1| isoleucine-tRNA ligase [Francisella novicida GA99-3548]
          Length = 935

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N  + I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPATDIIEFDKLVK 680


>gi|327399319|ref|YP_004340188.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181948|gb|AEA34129.1| leucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 814

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 64/171 (37%), Gaps = 26/171 (15%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-M 313
           A+  E    + +  G +  +G KMSKS GN +  ++++         + A   RL +L  
Sbjct: 556 ANSTEPFKRL-LTQGMVIKDGAKMSKSKGNVVDPDDIIN-------QYGADTARLFILFA 607

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
               + ++++ + +  A   L++  +       +       +  D+NT   ++ L+ +  
Sbjct: 608 APPEKDLEWSDEGVEGAYRFLNRVWRLVYEYKDLKV-----IDIDINTDR-LKELNYMIH 661

Query: 374 ESTK-----------NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
            + K           N  +         +   +   E  N   + AIE L+
Sbjct: 662 STIKKITQDFENYHFNTAIAASMEFVNFLYDFKPKTEDENALFAKAIEVLL 712


>gi|237838505|ref|XP_002368550.1| leucyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211966214|gb|EEB01410.1| leucyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 1162

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TA 262
           + P G   P  H++       Y     D+   G DLIF H    +               
Sbjct: 720 DLPKGSTIPAEHLKRMRNEFEY-WYPLDLRVSGKDLIFNHLTFSLYSHAAIWPHRPDLWP 778

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
             ++ NG + ++ +KMSKS GNFI+I +       G + + A  +R+A+
Sbjct: 779 RAFVCNGHIMVDAQKMSKSLGNFISIED-------GIKEFTADAMRVAL 820


>gi|221484180|gb|EEE22476.1| leucyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 1162

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%)

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TA 262
           + P G   P  H++       Y     D+   G DLIF H    +               
Sbjct: 720 DLPKGSTIPAEHLKRMRNEFEY-WYPLDLRVSGKDLIFNHLTFSLYSHAAIWPHRPDLWP 778

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
             ++ NG + ++ +KMSKS GNFI+I +       G + + A  +R+A+
Sbjct: 779 RAFVCNGHIMVDAQKMSKSLGNFISIED-------GIKEFTADAMRVAL 820


>gi|221639361|ref|YP_002525623.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782980|sp|B9KSX6|SYR_RHOSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221160142|gb|ACM01122.1| Arginyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 580

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 71/393 (18%), Positives = 127/393 (32%), Gaps = 80/393 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L RLL Y        Y  N       ++ R+  E      
Sbjct: 133 PT--GPMHVGHVRGAVVGDALARLLAYAGWNVTREYYINDGGAQVDVLARSAFE----RY 186

Query: 93  NDAISIITSKNTQQFVKDT-----TRLACLAPTH-----------QPR--ATNHIPQMIY 134
            +A  +        +  D        L                  + R  AT  + QMI 
Sbjct: 187 REAHGLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEQHWLTEVREFATEMMMQMIR 246

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGS----FSRRKIDEQKMGTRVPEKYHKKNPAD 190
             +++   G       ++     ++   G       R K  +      V E    K P D
Sbjct: 247 --EDLAALG----VEMDVYSSEKALYGTGKIEAALDRLKEMDLIY-EGVLEPPKGKTPED 299

Query: 191 F-----ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HG 235
           +      L++ +   +   + P  +    W      ++ HY        ++ DI    HG
Sbjct: 300 WEPREQTLFRSTAHGDDV-DRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHG 358

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLE 293
           G +  +      + A +  +          I    L   G   KMSK  G ++T+ +++E
Sbjct: 359 GYVKRM------KAAVAALSAGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVE 412

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTS 341
                       V R  ML       +DF   ++ E            A   ++   + +
Sbjct: 413 QVGT-------DVTRFVMLTRKNDATLDFDFDKVLEQSKENPVFYVQYANARINSVLRKA 465

Query: 342 TSKG--IIDPAVLSALYNDLNTVSAIQALHKLA 372
             +G  + D  + +A  + L+  + I  + KLA
Sbjct: 466 REQGMDVSDATLATADLDRLDHPAEIALIAKLA 498


>gi|332712037|ref|ZP_08431967.1| isoleucyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332349365|gb|EGJ28975.1| isoleucyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 959

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 53/137 (38%), Gaps = 6/137 (4%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A     L    DI+  G D      ++ +  S  ++       +  H   L+ +GRKMS
Sbjct: 553 VAEQREELRYPVDIYLEGSDQHRGWFQSSLLTSVASNGYAPYKTVLTHGFVLDDQGRKMS 612

Query: 280 KSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +    ++E  K   +   + A V+RL +    Y   +  +   L +   +  K 
Sbjct: 613 KSLGNILEPAIIIEGGKNHKKEPPYGADVLRLWVSSVDYSSDVPISQSILKQLADVYRKI 672

Query: 338 PQTST----SKGIIDPA 350
             T+     +    DPA
Sbjct: 673 RNTARFLLGNLHDFDPA 689


>gi|328676512|gb|AEB27382.1| Isoleucyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 935

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N  + I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPATDIIEFDKLVK 680


>gi|251794004|ref|YP_003008736.1| isoleucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535403|gb|ACS98649.1| isoleucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 940

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 545 VANRPEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDNKAPYKQVLTHGFTVDGQGRKMS 604

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 605 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 657

Query: 340 TST 342
           T+ 
Sbjct: 658 TAR 660


>gi|159107882|ref|XP_001704216.1| Leucyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157432272|gb|EDO76542.1| Leucyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 1173

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 48/129 (37%), Gaps = 19/129 (14%)

Query: 220 SAMSSHY-LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLE 274
           +AM   +      D+   G DLI  H      N  A     D   K       NG L L 
Sbjct: 736 TAMRESFCFWYPVDLRCSGKDLIPNHLTMMLYNHTAIWS--DDEAKWPRGMRANGHLQLN 793

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAE 331
             KMSK+ GNF+T +E +       R + A  +R A+      + +D   F  +    A 
Sbjct: 794 DAKMSKATGNFLTADEAI-------RKYGADAVRFALADAG--DGLDDANFREETANNAV 844

Query: 332 ILLSKWPQT 340
           + L     T
Sbjct: 845 LRLYNLLAT 853


>gi|328675587|gb|AEB28262.1| Isoleucyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 935

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDIDKNLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N  + I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPATDIIEFDKLVK 680


>gi|261840237|gb|ACY00003.1| leucyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 806

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 13/101 (12%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS--KGIIDPAVLSALYNDLNTVSAIQ 366
             A   + +    + +       P    A    LN    + 
Sbjct: 617 EGAHRFIKRLYDKANAIKSTTSKPEFKEA---SLNEAEKLA 654



 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|269123856|ref|YP_003306433.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315182|gb|ACZ01556.1| isoleucyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 928

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 88/218 (40%), Gaps = 29/218 (13%)

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRG---RP-GWHIECSAMSSHYLGKVFDIHGGGLDL 240
           K N  D  L K  + ++  ++S        RP G++I           +  D++  G D 
Sbjct: 517 KHNLKDVELRKERSILDVWFDSGVSHRAVLRPRGYNI-----------RPVDLYLEGSDQ 565

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
                ++ +  S  +        +  H   ++ +GRKMSKS GN IT  ++++       
Sbjct: 566 HRGWFQSSLLTSVASTFDSPYKKLLTHGFVMDGQGRKMSKSLGNTITPKDIIDVHG---- 621

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALY 356
              A ++RL +    YRE +  +   + +      K   T+     +    D +   A Y
Sbjct: 622 ---ADILRLWVSSVDYREDVRISDNIIQQMTDSYRKIRNTARYLLGNINDFDRSNKVA-Y 677

Query: 357 NDLNTVS--AIQALHKLARESTKNHDLLPIFNASAHIL 392
           +D+  +   A+  L +L  + TK+++    ++    IL
Sbjct: 678 DDMLEIDKWAMHKLEELKEKVTKHYENYEFYSLFQEIL 715


>gi|254583910|ref|XP_002497523.1| ZYRO0F07524p [Zygosaccharomyces rouxii]
 gi|238940416|emb|CAR28590.1| ZYRO0F07524p [Zygosaccharomyces rouxii]
          Length = 1099

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 45/204 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I  +      +        NG L L   KMSKS GNF+T+ 
Sbjct: 689 PLDVSISGKDLITNHLTFFIYTNVALFPRKFWPRGVRANGHLMLNNAKMSKSTGNFMTLE 748

Query: 290 ELL-------------------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +++                   E   F   +  A ++RL  L        ++  + +  A
Sbjct: 749 QIVEKFGADASRIALGDAGDTMEDANFDESNANAAILRLFNLK-------EWAEETVKSA 801

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-A 389
           +       +T  S  I D A  + +               L  E+ + ++L    NA   
Sbjct: 802 DQF-----RTGPSDEIFDVAFENEMN-------------ALVEETYRQYELTNYKNALKF 843

Query: 390 HILGIEVCKEHLNKNISIAIEKLV 413
            +   +  +++  ++     + LV
Sbjct: 844 GLFDFQAARDYYRESCETMHKDLV 867


>gi|88707061|ref|ZP_01104757.1| isoleucyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88698711|gb|EAQ95834.1| isoleucyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 934

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 13/110 (11%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A        +  H   ++ +GRKMSKS GN I   + +  +        A ++RL +  T
Sbjct: 577 AYGEAPFKAVLTHGFTVDGDGRKMSKSIGNIIPARKAMNDQG-------ADILRLWLAST 629

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYN-DL 359
            YR  +  + + +        +   T+     +    DPA   AL + DL
Sbjct: 630 DYRNEVAVSDEIIKRTGDSYRRIRNTARFMLANLSGFDPA-EDALADEDL 678


>gi|118497048|ref|YP_898098.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|194324283|ref|ZP_03058057.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
 gi|166200209|sp|A0Q529|SYI_FRATN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118422954|gb|ABK89344.1| isoleucyl-tRNA synthetase [Francisella novicida U112]
 gi|194321730|gb|EDX19214.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           FTE]
          Length = 935

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N  + I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPATDIIEFDKLVK 680


>gi|208780505|ref|ZP_03247845.1| isoleucyl-tRNA synthetase [Francisella novicida FTG]
 gi|208743651|gb|EDZ89955.1| isoleucyl-tRNA synthetase [Francisella novicida FTG]
          Length = 919

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 525 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 584

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 585 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 637

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N  + I    KL +
Sbjct: 638 NTAR--------FLLSNLDGFNPATDIIEFDKLVK 664


>gi|254372408|ref|ZP_04987898.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570136|gb|EDN35790.1| isoleucyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 935

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 54/155 (34%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N  + I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPATDIIEFDKLVK 680


>gi|125973752|ref|YP_001037662.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004483|ref|ZP_05429462.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281417908|ref|ZP_06248928.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|166231601|sp|A3DEU0|SYL_CLOTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|125713977|gb|ABN52469.1| leucyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991488|gb|EEU01591.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|281409310|gb|EFB39568.1| leucyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|316940054|gb|ADU74088.1| leucyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 825

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 70/217 (32%), Gaps = 54/217 (24%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H             +      E   N+ +  G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAILHLLYSRFLMKVLYDLGYVDYDEPFTNL-LTQGMVLKDGAKMSKSLG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK------ 336
           N ++  E++E        + A   RL +L  +   + ++++ Q +      +++      
Sbjct: 587 NVVSPEEIIE-------KYGADTARLFILFASPPEKDLEWSDQGVEGCYRFINRVWRIVN 639

Query: 337 -WPQTSTSKGIIDPAVLSALY---------------ND----LNTVSAIQALHKLAREST 376
            +       G ID +  +                  +D     N  +AI A+ +L     
Sbjct: 640 EFADAVKEGGNIDTSTFTKADKELWYMLNNTLKRVTDDISQRFNFNTAISAVMELVNSLY 699

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
              D +                      +   IEKL+
Sbjct: 700 YYKDKVA-------------DDSKNKALVREVIEKLI 723


>gi|325295230|ref|YP_004281744.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065678|gb|ADY73685.1| leucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 912

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 52/176 (29%), Gaps = 18/176 (10%)

Query: 17  EFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
            F++      + YV    P      H+G+ R   + DV+ R  + +     V +      
Sbjct: 21  VFKSKPTGKEKYYVLEMFPYPSGRIHMGHVRNYSIGDVIARFKKMFGYN--VIHPMGWDS 78

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
                   A      I         T  N +    +  +L       +   T  +P    
Sbjct: 79  FGLPAENAA------IKSGVHPREWTLSNIEYMKNELKKLGFSY-DWEREVTTCMPDYYK 131

Query: 135 LIQ----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             Q     ++  G AY A   + +  S        +  ++DE+    R      +K
Sbjct: 132 WNQWIFLKMLEKGIAYRAKASVNWCPSCQT---VLANEQVDEEGRCWRCGSLVEQK 184


>gi|325577254|ref|ZP_08147738.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160836|gb|EGC72957.1| isoleucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 941

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|256810012|ref|YP_003127381.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793212|gb|ACV23881.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 650

 Score = 52.2 bits (124), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D++ + L+    E    +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIMCKYLKLRGEE--AIHVGGTDNHGVPITLTAEKE- 62

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  +   I  K   +  +D   L        +  +  HI         +  +G+ Y
Sbjct: 63  -----GKSPEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|317011778|gb|ADU85525.1| leucyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 806

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 22/136 (16%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSAL 616

Query: 328 TEAEILLSKWPQTSTS--KGIIDPAVLSALYNDLNTV---------SAIQALHKLAREST 376
             A   + +    + +       P    A    LN            A++  H++  ++ 
Sbjct: 617 EGAHRFIKRLYDKANAITPTTSKPEFKEA---SLNEAEKPARKKVYEALKKSHEIFNKAE 673

Query: 377 KNHDLLPIFNASAHIL 392
             +    +  +    L
Sbjct: 674 SAYAFNTLIASCMEAL 689



 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 33/122 (27%), Gaps = 17/122 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D L R  R ++    V +              A +       
Sbjct: 38  PYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDSFGMPAENAAIKHGIH--- 92

Query: 93  NDAISIITSKNTQQFVKDTTRL------ACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  T +N +   K+   L           T  P  T    +  + I  +   G  Y
Sbjct: 93  ---PKTWTYENIENMQKEFEALGFSFAKNREFATSDPNYTEF--EQQFFID-LWEKGLIY 146

Query: 147 EA 148
             
Sbjct: 147 RK 148


>gi|298529299|ref|ZP_07016702.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510735|gb|EFI34638.1| isoleucyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 937

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 74/219 (33%), Gaps = 37/219 (16%)

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNY----GSFSRRKIDEQKMGTRVPEKYHKKN 187
           ++ LI       HAY               +      +   +++E         +   + 
Sbjct: 472 IVALICGKCD--HAYTDPEWFFSIVERFEKHERGCDYWFEAELEEVVPQGLSCPECGSQE 529

Query: 188 PADFILWKRSTPMEPGW-ESP-----WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
                 W++   +   W +S          RP    ECS  +  YL    D H G     
Sbjct: 530 ------WQKEDDILDVWFDSGTSFAAVLEKRP----ECSFPADMYLEGT-DQHRGWF--- 575

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
              H + +A S           +  H   ++ EGRKMSKS GN I   E+++        
Sbjct: 576 ---HSSLLA-SMGTRGSPPYKTVLTHGYVVDGEGRKMSKSIGNVIAPQEIID-------K 624

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + A ++R+ +    Y+E +  + + LT       +   T
Sbjct: 625 YGAEILRIWVSAVDYQEDVRISQEILTRLVDAYRRIRNT 663


>gi|148360414|ref|YP_001251621.1| isoleucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|166229745|sp|A5IFX5|SYI_LEGPC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148282187|gb|ABQ56275.1| isoleucyl tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 931

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 18/134 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +     +     +  H   ++ EG+K+SKS GN++ +++L+           A ++RL +
Sbjct: 575 AVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKLVNQHG-------ADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--L 368
             T YR  +  + + +        +   T+          L A   D N     I A  L
Sbjct: 628 ASTDYRHEVSISEEIIKRNADAYRRIRNTAR--------FLLANLFDFNPASDCIDAKEL 679

Query: 369 HKLARESTKNHDLL 382
            +L R + K   LL
Sbjct: 680 LELDRWALKRCQLL 693


>gi|150401049|ref|YP_001324815.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187647735|sp|A6UUN1|SYM_META3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150013752|gb|ABR56203.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 672

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 17/135 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D++ R L+       V +V    +    I   A +E 
Sbjct: 13  YTNGP-----LHLGHARSTYIPADIIKRYLKLKG--NDVIHVGGTDNHGVPITLTAEKEG 65

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QPRATNHIPQMIYLIQNIILHGHAY 146
                      I +K   +  +D   L+    ++ +  +  HI       + +  +G+ Y
Sbjct: 66  VK------PEDIVNKYHNEIKRDLDNLSVEFDSYGKTHSDTHIQNAQEFYKKLKENGYIY 119

Query: 147 EA--NNEIIFDTSSI 159
           E         D    
Sbjct: 120 EKEIEQFYCPDCDKF 134


>gi|145630058|ref|ZP_01785840.1| beta-hexosaminidase [Haemophilus influenzae R3021]
 gi|144984339|gb|EDJ91762.1| beta-hexosaminidase [Haemophilus influenzae R3021]
          Length = 941

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|313231029|emb|CBY19027.1| unnamed protein product [Oikopleura dioica]
          Length = 1116

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 36/136 (26%), Positives = 52/136 (38%), Gaps = 22/136 (16%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DL+  H      N +A     +   K       NG L L G KMSKS GNF
Sbjct: 616 PVDVRVSGKDLVQNHLTYYLYNHVAMWE--NDKSKWPQSVRANGHLLLNGEKMSKSTGNF 673

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML----MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           +T+ + +E        + A  +RLA+          E  +F  +    A + L  W    
Sbjct: 674 LTLTDAIE-------KYSADGMRLALADAGDSV---EDANFVDKTADGAVLRLYNWIDFV 723

Query: 342 TSKGIIDPAVLSALYN 357
           T      P +  AL +
Sbjct: 724 TDVANKKPQI--ALKD 737


>gi|290475178|ref|YP_003468064.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174497|emb|CBJ81291.1| leucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 821

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++   G +  +G KMSKS G
Sbjct: 527 PVDLYIGGIEHAILHLLYARFIHKVMRDEGLLTSDEPFVRLFT-QGMVLKDGSKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N +   + ++       ++ A  +RL M+      + ++++   +  A   + K   T
Sbjct: 586 NVVNPQDYID-------NYGADTLRLFMMFSAPPEQQLEWSDSGVDGAHRFIKKLWNT 636


>gi|154173836|ref|YP_001407768.1| isoleucyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|166200201|sp|A7GX26|SYI_CAMC5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|112802487|gb|EAT99831.1| isoleucyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 919

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 18/169 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +      NI  H   ++  G+KMSKS GN +   ++        +S+   ++RL +
Sbjct: 586 STAINSHAPYKNILTHGFTVDENGQKMSKSKGNVVAPQDV-------AKSYGVEILRLWV 638

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA-IQALHK 370
            ++ Y   +  +   L +      K   T           L A  NDL T+      L +
Sbjct: 639 GLSDYSSDLKISENILKQVSEQYRKIRNTIR--------FLLANVNDLETIGTDFGFLDQ 690

Query: 371 LA--RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
               R      +    F A     G  +    L+ ++S     + ++RL
Sbjct: 691 WILGRAKRVFDEASKCFRAYDFSKGFNLLLNFLSADLSGIYLDICKDRL 739


>gi|57505428|ref|ZP_00371356.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016253|gb|EAL53039.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 530

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 60/386 (15%), Positives = 115/386 (29%), Gaps = 67/386 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-DIDDKIIERARQEHPSIP 91
           PT     HIG+AR  I  D L R+ R+   +    Y  N   +  D +      +   + 
Sbjct: 115 PT--GPLHIGHARGAIFGDTLARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILY 172

Query: 92  INDAISIITSKNTQQFVKDTT--RLACLAPTHQP------RATNHIPQMIYLIQNIILHG 143
           +N+ +    +    +++ D      A               A     +M+ LI+  +   
Sbjct: 173 LNEELEYPENAYKGEYIDDLACEAFANFEKDFFTMDNVSNLAFWAKDKMLDLIKQNLAQA 232

Query: 144 HA----YEANNEII----FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
           +     Y +             S+  +G    R        +   ++  +    D     
Sbjct: 233 NIIIDHYVSERSYYNTLEDTIRSLKAHGGVYERDYKIWLASSLKGDEKDRVIVRD----- 287

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSC 253
                          GR  +           +G+ +D  I+  G D        + A   
Sbjct: 288 --------------DGRGTYLAADIVYHKDKMGRGYDKCINIWGADHHGYIPRMKAAIEF 333

Query: 254 CADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                +    I      L  + +  KMSK  GNFI ++E+L+          +  +R   
Sbjct: 334 LGFNPQNLEIILAQMVSLLKDNQPYKMSKRAGNFILMSEILDEIG-------SDALRFIF 386

Query: 312 LMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSALYND 358
           L       ++F +  L +            A   + + + +   S   +  A LS L + 
Sbjct: 387 LSKKCDTHLEFDIDILKKEDNSNPIFYINYAHARVKQIFLKAGKSLDDVVEADLSNLND- 445

Query: 359 LNTVSAIQALHKLARESTKNHDLLPI 384
                A   L +     +  +D    
Sbjct: 446 ----EATNLLFEALNLGSVLNDAFEQ 467


>gi|54293912|ref|YP_126327.1| isoleucyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|81822422|sp|Q5WXX1|SYI_LEGPL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53753744|emb|CAH15202.1| Isoleucyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 931

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 18/134 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +     +     +  H   ++ EG+K+SKS GN++ +++L+           A ++RL +
Sbjct: 575 AVAMYGVAPYKTVLTHGYTVDAEGKKLSKSKGNYVALDKLVNQHG-------ADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--L 368
             T YR  +  + + +        +   T+          L A   D N     I A  L
Sbjct: 628 ASTDYRHEVSISEEIIKRNADAYRRIRNTAR--------FLLANLFDFNPASDCIDAKEL 679

Query: 369 HKLARESTKNHDLL 382
            +L R + K   LL
Sbjct: 680 LELDRWALKRCQLL 693


>gi|116754198|ref|YP_843316.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694646|sp|A0B7K2|SYM_METTP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116665649|gb|ABK14676.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 669

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 24/129 (18%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  +  D+  R LR       V ++         I+  A     
Sbjct: 11  TCGLPYANGPAHIGHLRTYVPADIFVRALRRMG--HDVLFICGSDAHGTPIVVNAESR-- 66

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATNHIPQMIYLIQNII 140
                 +   +     + F      +            P++  R          +++ ++
Sbjct: 67  ----GMSPRELVEFYHKHFEDVFRSINVRFDYFGCTDDPSNHHRT-------QEIVRALM 115

Query: 141 LHGHAYEAN 149
             GH Y   
Sbjct: 116 ERGHVYPKE 124


>gi|323699090|ref|ZP_08111002.1| leucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459022|gb|EGB14887.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 833

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 54/142 (38%), Gaps = 23/142 (16%)

Query: 218 ECSAMSSHYLGKVF--DIHGGGLDLIFPHHENEI----AQSCCA--DRIEKTANIWIHNG 269
           E  A+ + +L      D + GG++    H         A   C      E  AN+ +  G
Sbjct: 523 ETEALGAEHLNYWMNVDQYIGGIEHAILHLLYSRFFTKALRDCGYVTNSEPFANL-LTQG 581

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQ 325
            +  +G KMSKS GN +  N ++         + A   RL +L      P    ++++ Q
Sbjct: 582 MVLKDGGKMSKSKGNVVDPNAMIN-------QYGADATRLFILFA---SPPVKELEWSDQ 631

Query: 326 RLTEAEILLSKWPQTSTSKGII 347
            +  A   LS+  +       +
Sbjct: 632 GIDGAYRFLSRLWRLVEELEDV 653



 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 41/135 (30%), Gaps = 17/135 (12%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DPS  + YV    P      H+G+ R   + DV+ R          V +           
Sbjct: 30  DPSRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKTMQGFN--VLHPMGWDAFGLPA 87

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI--PQMIY 134
              A +           +  T +N  +      RL       +  AT    +    QM +
Sbjct: 88  ENAAIKHETH------PATWTYQNIAEMRAQLKRLGYSYDWRREIATCRPEYYKWEQMFF 141

Query: 135 LIQNIILHGHAYEAN 149
           L    +  G AY  +
Sbjct: 142 L--RFLEKGLAYRKD 154


>gi|40063059|gb|AAR37915.1| isoleucyl-tRNA synthetase [uncultured marine bacterium 560]
          Length = 923

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 7/118 (5%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +S YL  + D++  G D      ++ +  SC  +       +  H   ++  G KMSKS 
Sbjct: 540 ASDYLSDIADMYLEGSDQHRGWFQSSLITSCAINGRAPYRQVLTHGFTVDQNGHKMSKSL 599

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           GN I   +++ +         A ++RL +  T Y   +  + + L  +     +   T
Sbjct: 600 GNVIPPQKVVNSLG-------ADILRLWIGSTDYSGEMTVSDEILKRSADSYRRIRNT 650


>gi|254482596|ref|ZP_05095835.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
 gi|214037287|gb|EEB77955.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
          Length = 819

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 38/162 (23%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    + +  G +  +G KMSKS GN +    L++        + A  +RL  M      
Sbjct: 562 EPFIRL-LTQGMVLKDGAKMSKSKGNTVDPQSLID-------QYGADTVRLFSMFAAPPE 613

Query: 318 EPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPAVLS---------------ALY 356
           + ++++   +  A   L +  +       +    ++D A L+                + 
Sbjct: 614 QSLEWSDSGVEGANRFLKRLWKLVHRHLAAEPAPVLDTATLTDQQKNARRKTHETIGKVN 673

Query: 357 ND------LNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           +D       NT  AI A+ +L  E  K  D           L
Sbjct: 674 DDYGRRQTFNT--AIAAIMELCNELGKLDDSAQSRAVMDEAL 713



 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 35/123 (28%), Gaps = 25/123 (20%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+ R  R     K V                A      I  N   +  
Sbjct: 49  HMGHVRNYTIADVIARYQRMQG--KNVLQPMGWDAFGLPAENAA------IKNNVPPAHW 100

Query: 100 TSKNTQQFVKDTTRLACL----------APTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
           T++N     +   +L              P +         +  +    +   G AY+  
Sbjct: 101 TAQNIDYMREQLRQLGFAYDWDREIATCDPDYYRW------EQWFFT-RLFEKGLAYKKK 153

Query: 150 NEI 152
            E+
Sbjct: 154 AEV 156


>gi|150399535|ref|YP_001323302.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
 gi|150012238|gb|ABR54690.1| isoleucyl-tRNA synthetase [Methanococcus vannielii SB]
          Length = 1033

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 37/90 (41%), Gaps = 10/90 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN ++ +E+ E        + A V+R 
Sbjct: 570 ALSAVVFNDTPYKKCMMHGFTLDETGEKMSKSLGNIVSPDEVTE-------KYGADVLRF 622

Query: 310 AMLMTH--YREPIDFTVQRLTEAEILLSKW 337
            +L  +  + E + F+   + E    L+  
Sbjct: 623 YLLSANKAW-EDLRFSYSEMDEVRSALNTL 651


>gi|317121723|ref|YP_004101726.1| isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315591703|gb|ADU50999.1| Isoleucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 946

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 11/110 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EGRKMSKS GN +  N+++       R + A V+RL  
Sbjct: 571 AVATRGQAPYRAVLTHGFVVDGEGRKMSKSLGNVVDPNDVI-------RRYGADVLRLWA 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYN 357
           + + YR  +  +   L +   +  K   T      + G  DPA  +  Y+
Sbjct: 624 VSSDYRGDVRISEDILKQMAEIYRKIRNTLRFLLGNLGDFDPARDAVAYD 673


>gi|312880110|ref|ZP_07739910.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783401|gb|EFQ23799.1| Isoleucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 931

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ EGRKMSKS GN     E+++        + A ++RL +
Sbjct: 579 SVATRGSAPFRTVLTHGFIVDGEGRKMSKSLGNVTRPQEVIDR-------YGADILRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T YR  +  +   L        +   T+ 
Sbjct: 632 ASTDYRGDVRISETILKNLVETYRRIRNTAR 662


>gi|206900100|ref|YP_002251787.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739203|gb|ACI18261.1| methionyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 628

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 42/181 (23%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D++  H     A     +         + +GF  ++G K+SKS GN +  +EL
Sbjct: 253 DIHLIGKDILRFHAIIWPAILMALN--IPLPKTVLAHGFWTIKGGKISKSKGNRVDPHEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM----------------THYREPID-------------- 321
           +         +    +R  +L                   Y   +               
Sbjct: 311 INL-------YGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLVNRVLTVA 363

Query: 322 --FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
             +T  ++ E +    +          +   V  A+ N  N  +A+  + ++ +E+ +  
Sbjct: 364 EKYTEGKVPEPKEFKEEDTYLLQKGEDVANKVEEAMAN-FNPANALTQIWEVIQEANRYI 422

Query: 380 D 380
           D
Sbjct: 423 D 423


>gi|169350153|ref|ZP_02867091.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
 gi|169292936|gb|EDS75069.1| hypothetical protein CLOSPI_00895 [Clostridium spiroforme DSM 1552]
          Length = 878

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 89/237 (37%), Gaps = 26/237 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ P D   WK+   +   W S   W     GW  E S +   Y      +   G D+I
Sbjct: 433 GKQPPKDIENWKQDEDVLDTWFSSALWPFSTLGWPNEDSELFKRYFPTNTLV--TGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS          N+ IH    + +GRKMSKS GN +   ++++        
Sbjct: 491 FFWVSRMIFQSLHFTDQRPFENVLIHGLIRDEQGRKMSKSLGNGVDPMDVID-------E 543

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSAL- 355
           + A  +R  +       P   + +  ++L  +   ++K   ++      I +      L 
Sbjct: 544 YGADTLRFFLTTNS--APGMDLRYIPEKLESSWNFINKIWNSARFVLMNIDESMKYEDLT 601

Query: 356 YNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
           +++LN      +  L+++ RE   N D     N      G E+ K   +   S  IE
Sbjct: 602 FDNLNLCDKWILNRLNEVIREVDINMDKFEFVNV-----GTELYKFIWDDFCSWYIE 653


>gi|329113410|ref|ZP_08242191.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
 gi|326697235|gb|EGE48895.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
          Length = 512

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 38/132 (28%), Gaps = 11/132 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I  DV+ R  R    E        +T  D+      + E  +     
Sbjct: 14  VNGAPHIGHAYTSIAADVMARFHRLAGDEVFF-----LTGTDEH---GQKVEQAAQANGI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  K +  F      +         R T   HI     L + +  +G  Y    E 
Sbjct: 66  DAKSFADKVSADFRNMADAMNISYDDF-IRTTEPRHITSTQALWKKVADNGAIYLGAYEG 124

Query: 153 IFDTSSIPNYGS 164
            +       YG 
Sbjct: 125 WYALRDECFYGE 136



 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 15/82 (18%)

Query: 234 HGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H  G D+   H     A    A      +  AN W       +EG+KMSKS GN +   +
Sbjct: 258 HLVGKDIARFHAVYWPAFLMAAGIELPRKVFANGWW-----TIEGQKMSKSLGNVVDPRD 312

Query: 291 LLETKKFGGRSWPAPVIRLAML 312
           L+       + +    +R  +L
Sbjct: 313 LV-------KEFGLDAVRFFLL 327


>gi|145637267|ref|ZP_01792928.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittHH]
 gi|145269519|gb|EDK09461.1| isoleucyl-tRNA synthetase [Haemophilus influenzae PittHH]
          Length = 941

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G   D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 546 VANRPEFNGHDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 605

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 606 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 658

Query: 340 TST 342
           T+ 
Sbjct: 659 TAR 661


>gi|327401695|ref|YP_004342534.1| leucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317203|gb|AEA47819.1| leucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 940

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 58/160 (36%), Gaps = 13/160 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         E        NG+++LEG+KMSKS G  +T+ 
Sbjct: 588 PVDLRSSGKDLVANHLLFFLFHHVAIFSEEYWPRAIAVNGYVSLEGKKMSKSKGPLLTMK 647

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
             +E          A V R+ +L    Y    D+  + +      L ++   +      D
Sbjct: 648 RAVEENG-------ADVTRMYILYAAEYDSDADWRKKDVESLASHLKRFYNLAEEYYRKD 700

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
               S L   L     +  L +  +E+ +  D L    A 
Sbjct: 701 VKEPSRLDRWL-----VSRLQRAIKETREAMDRLQTRRAV 735


>gi|157804069|ref|YP_001492618.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|157785332|gb|ABV73833.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 510

 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 47/130 (36%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V +  HIG+A   +V DV+ R +R    E     V  +T  D+      + E  +I  N 
Sbjct: 14  VNNVPHIGHAYTSVVSDVIARFMRLCGFE-----VILLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + ++ F    T +         R T   H   +    Q ++ +G  Y+   E 
Sbjct: 66  DPQQFTDQISENFRHLMTSMHISNDDF-IRTTENRHKEAVAVFWQKLLDNGTIYKGFYEG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYAVRDEAFY 134


>gi|157826102|ref|YP_001493822.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|157800060|gb|ABV75314.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 512

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    +     V  +T  D+      + E  +I  N 
Sbjct: 14  VNDVPHIGHAYTSVASDVIARFMRLRGLD-----VIFLTGTDEH---GQKVEKAAINKNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + ++ F      +         R T   H   +    Q ++ +G  YE   E 
Sbjct: 66  DPQKFTDQTSESFRHLMAVMHISNDDF-IRTTENRHKEAVAVFWQKLLDNGTIYEGFYEG 124

Query: 153 IFDTS 157
            +   
Sbjct: 125 WYAVR 129


>gi|167839949|ref|ZP_02466633.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 845

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 67/185 (36%), Gaps = 35/185 (18%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++  ++  T+        A ++RL + 
Sbjct: 594 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQQIASTRG-------ADILRLWIA 646

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS----- 363
            T Y   +  + + L        +   T      +    DP       +D  +       
Sbjct: 647 STDYAAEMSISDEILERVVETYRRIRNTLRFLLQNVADFDP------DDDSVSAERLLDV 700

Query: 364 ---AIQALHKLA---RESTKNHDLLPIFNAS----AHILG---IEVCKEHLNKNISIAIE 410
              A+    +     R +   +D L +   +    A  LG   ++  K+ L  +++  +E
Sbjct: 701 DRYALARCREFVDACRSAYARYDFLAVTRLAHGYCAEELGGFYLDALKDRLYASVADGVE 760

Query: 411 KLVQE 415
           +   +
Sbjct: 761 RRSAQ 765


>gi|73668089|ref|YP_304104.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729563|sp|Q46F18|SYM_METBF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72395251|gb|AAZ69524.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 710

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 16/124 (12%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  +  D+  R LR     + VT+V         I+  A +   
Sbjct: 12  TCGLPYANGKAHIGHLRTYVPADIYARSLRKEG--RDVTFVCGSDTHGTPIVVNAEE--- 66

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAP----THQPRATNHIPQMIYLIQNIILHGH 144
              +      +     + F +   +L         T  P    +  + + ++  +I  G+
Sbjct: 67  ---LGITPKELVEVYHKHFDETFKQLGVYFDAFGTTDDP---ENHNRTLDIVNRLIEKGY 120

Query: 145 AYEA 148
            Y  
Sbjct: 121 VYPK 124



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 44/98 (44%), Gaps = 8/98 (8%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+ + H     A    AD    TA   + +G + +E +K SKS GN + + E  
Sbjct: 288 VHFIGGDITYHHCIFWPAMLKGADYSVPTAV--VASGMVKIEDKKFSKSRGNVVWVGE-- 343

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
               +    +   ++R  +   T + + ++F+ + L E
Sbjct: 344 ---DYLSHGFHPDLLRYYLASYTSHTKELNFSWRVLQE 378


>gi|330994631|ref|ZP_08318554.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
 gi|329758272|gb|EGG74793.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
          Length = 512

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 42/132 (31%), Gaps = 11/132 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   +  DV+ R  R    +        +T  D+      + E  +     
Sbjct: 14  VNGAPHIGHAYTSVAADVIARFKRLAGFDVFF-----LTGTDEH---GQKVEQAAQAAGM 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  +    F +D      ++     R T   H+     L + +  +GH Y    E 
Sbjct: 66  TPIAFADRVAADF-RDMYDTMAISYDDFIRTTEPRHVQGAQALWKKLEENGHIYLDAYEG 124

Query: 153 IFDTSSIPNYGS 164
            + T     YG 
Sbjct: 125 WYATRDECFYGE 136



 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++  H     A    A  +     ++ H G+  +EG+KMSKS GN +   +L+ 
Sbjct: 258 HLVGKDILRFHAIYWPALLMAA-GLPLPDRVFSH-GWWTIEGQKMSKSLGNVVDPRDLVT 315

Query: 294 TKKFGGRSWPAPVIRLAML 312
                        IR  ++
Sbjct: 316 EFGLDP-------IRFFLM 327


>gi|301169687|emb|CBW29288.1| isoleucyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 924

 Score = 51.8 bits (123), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A    + G+  D++  G D       + +  S   D       +  H   ++ +GRKMS
Sbjct: 529 VANRPEFNGQDIDMYLEGSDQHRGWFMSSLMLSTATDSKAPYKQVLTHGFTVDGQGRKMS 588

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +T  E+++        +   ++RL +  T Y   +  + + L  A     +   
Sbjct: 589 KSIGNIVTPQEVMD-------KFGGDILRLWVASTDYTGEMTVSDEILKRAADSYRRIRN 641

Query: 340 TST 342
           T+ 
Sbjct: 642 TAR 644


>gi|159905012|ref|YP_001548674.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159886505|gb|ABX01442.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 663

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 39/123 (31%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D+  R LR    E  V +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIYTRYLRLKGEE--VVHVGGTDNHGVPITLTAEREG 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
                      I  +       D   L     T     ++ HI         +  +G+ Y
Sbjct: 64  VKPI------DIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIKTAQEFYSKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|330508266|ref|YP_004384694.1| leucyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328929074|gb|AEB68876.1| leucyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 950

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 11/132 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         +        NGF++LEG+KMSKS G  +T+ 
Sbjct: 581 PVDLRTSGKDLVANHLLFFLYHHVAIFPEQLWPKAIAVNGFVSLEGQKMSKSKGPLLTLR 640

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST---SKG 345
           + +           A V RL +L        +D+    +      L ++   +    + G
Sbjct: 641 QAVAENG-------ADVTRLYILGNAEGTADVDWRNDGVEATHAHLDRFYNLAREIMADG 693

Query: 346 IIDPAVLSALYN 357
            ID +    L +
Sbjct: 694 SIDESAEKTLID 705


>gi|296109584|ref|YP_003616533.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434398|gb|ADG13569.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 639

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+ R   I  D+LY+ L+    E  V +V    +    I+ RA +E 
Sbjct: 10  YTNGP-----LHLGHVRSTYIPADILYKYLKLRGEE--VIHVGGTDNHGVPILLRAEKE- 61

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
                      I     ++  +D   L           +  HI         ++ +G+ Y
Sbjct: 62  -----GKKPEEIVEYYHKRIKEDLDSLGIEFDVFGKTHSEIHIKTAQEFYLKLVENGYIY 116

Query: 147 EAN 149
           E  
Sbjct: 117 EKE 119


>gi|15965276|ref|NP_385629.1| arginyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307309299|ref|ZP_07588967.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|23822199|sp|Q92Q31|SYR_RHIME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15074456|emb|CAC46102.1| Probable arginyl-tRNA synthetase (arginine--tRNA ligase)
           [Sinorhizobium meliloti 1021]
 gi|306900300|gb|EFN30917.1| arginyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 585

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 61/341 (17%), Positives = 115/341 (33%), Gaps = 73/341 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N      +++ R+        +
Sbjct: 133 PT--GPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLARSAFLRYRQAL 190

Query: 93  NDAISII-TSKNTQQFV----KDTT-----RLACLAPTHQ-PRATNH-IPQMIYLIQNII 140
            + I+ I        ++    +         L  +      P      I  M+ +I+  +
Sbjct: 191 GEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVIDAMMAMIREDL 250

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRV------------PEKYHKKN 187
               A   N+++ F   ++ + G+   R  I++      V            PE +  + 
Sbjct: 251 A---ALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQLPEDWEDRE 307

Query: 188 PADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD------IHGGGLD 239
              F    RST +    + P     G   +     A    Y    FD      I+  G D
Sbjct: 308 QTLF----RSTEVGDDIDRPLIKSDGSYTY----FAADVAYFKDKFDRGFHEMIYVLGAD 359

Query: 240 LIFPHHENEIAQSCCADRIE--------KTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
                   E A +               +   ++ +   +     KMSK +G+F+T+ ++
Sbjct: 360 HGGYVKRLE-ALARAISGGTAKLTVLLCQLVKLYRNGEPV-----KMSKRSGDFVTLRDV 413

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTE 329
           ++             +R  ML   YR+   P+DF   ++TE
Sbjct: 414 VDEVGRDP-------VRFMML---YRKSSEPLDFDFAKVTE 444


>gi|319791172|ref|YP_004152812.1| arginyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315593635|gb|ADU34701.1| arginyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 561

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 102/349 (29%), Gaps = 70/349 (20%)

Query: 11  LERKIT--EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRL--------LRYY 60
              +    EF + +P+       GP      H+G+ R   + D +  L         R +
Sbjct: 116 ATGEKVLVEFVSANPT-------GP-----LHVGHGRQAALGDAICNLRASQGDSVWREF 163

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAP 119
           Y       ++ + +         +   P  P  +              +D        + 
Sbjct: 164 YYNDAGVQIQTLANSTQLRARGFKPGDPEWPSGEKAPAYNGDYIADIAEDFKAKKTVKSD 223

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKID-EQKM 175
             +  A+  I      I +I     AY   E + ++        NY   S        + 
Sbjct: 224 DREYTASGDIDD----IDSIREFAVAYLRREQDLDLQAFRVRFDNYYLESSLYTSGRVEA 279

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP-------GWESPWGRGRP--GWHIECSAMSSHY 226
                    K    D  LW +ST             +  +    P   +HI   A     
Sbjct: 280 AVGKLVAAGKTYEEDGALWLKSTDYGDDKDRVMKKKDGTYTYFVPDVAYHI---AKWERG 336

Query: 227 LGKVFDIHGGGLDLIFPHH---ENEIAQSCCADRIEK--TANIWIHNGFLNL----EGRK 277
             KV +I G        HH       A    A         +  +H   + +    E  K
Sbjct: 337 FHKVVNIQGTD------HHGTIARVRAGLQAAGEGIPEGYPDYVLHT-MVRVMKGGEEVK 389

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP-IDFTVQ 325
           +SK  G+++T+ +L+E             +R  +L    R+P  ++T  
Sbjct: 390 ISKRAGSYVTLRDLIEWT-------STDAVRFFLLS---RKPDTEYTFD 428


>gi|14521079|ref|NP_126554.1| leucyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|14285784|sp|Q9V0B9|SYL_PYRAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|5458296|emb|CAB49785.1| leuS leucyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 967

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 60/164 (36%), Gaps = 15/164 (9%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D    G DLI  H    I       R E        NGF  LEG+KMSKS GN +   
Sbjct: 603 PLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFI 662

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++    +    D+  + + +    L ++ +  +      
Sbjct: 663 DAIEENG-------ADVVRLYIMSLAEHDSDFDWRRKEVGKLRRQLERFYELISQF---- 711

Query: 349 PAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            A   A  N +L T+     LH+L +        L  F     +
Sbjct: 712 -AEYEAKENVELKTIDKW-LLHRLNKAIEGTTKALEEFRTRTAV 753


>gi|28493730|ref|NP_787891.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|28476772|gb|AAO44860.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 583

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A  ++V DV  R  R    +   T+  + TD     + RA +E    P   
Sbjct: 12  VNDIPHIGHAYTLVVSDVFARWQRQSGKD---TFFLSGTDEHGLKVLRAAEEKNMTPQGW 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++ +       K    L  ++     R T   H  ++ + I  +  + + Y      
Sbjct: 69  ADLMLKTAW-----KPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYSG 123

Query: 153 IFDTS 157
            +  S
Sbjct: 124 YYCVS 128



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 17/84 (20%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +     I+ H G+L ++G+KMSKS    I   +L +        +    +R   L  
Sbjct: 350 AAGLPVPEKIFAH-GWLLVDGQKMSKSKLTGIKPQDLTDI-------FGVDAVRYYFL-- 399

Query: 315 HYREPI-----DFTVQRLTEAEIL 333
             R+P+      F+++ +      
Sbjct: 400 --RQPVFGQDYSFSIESIAACYNS 421


>gi|253743537|gb|EES99902.1| Leucyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 1170

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 55/153 (35%), Gaps = 25/153 (16%)

Query: 226 YLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                 D+   G DL+  H      N  A     +   K       NG L L   KMSK+
Sbjct: 740 CFWYPVDLRCSGKDLVPNHLTMMLYNHTAIWS--NDETKWPRGMRANGHLQLNDAKMSKA 797

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKW- 337
            GNF+T  E +       + + A  +R A+      + +D   F  +    A + L    
Sbjct: 798 AGNFLTAGEAI-------QRYGADAVRFALADAG--DGVDDANFREETANNAVLRLYNLL 848

Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQA 367
               +  T+  +  P    A+   L+TV A  A
Sbjct: 849 STCQELLTNSVVCYPESYEAM---LSTVGAGSA 878


>gi|76800878|ref|YP_325886.1| leucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|76556743|emb|CAI48317.1| leucine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 880

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 15/126 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A     D  E   N+ +  G + LEG KMSKS G
Sbjct: 514 PVDQYVGGIEHAVMHLLYSRFVTKVLADHEDLDHREPFENL-LAQGMVQLEGEKMSKSKG 572

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++   +++        + A   RL M+         D+T + +  A   L++  +   
Sbjct: 573 NVVSPQAIVD-------EYGADTARLFMMQAAQPERDFDWTEEGVRSAYTFLTQLKELVA 625

Query: 343 SKGIID 348
           +    D
Sbjct: 626 AYAGGD 631


>gi|322698638|gb|EFY90407.1| leucyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 1088

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KM+KS GNF+T+ 
Sbjct: 675 PLDVRSSGKDLIPNHLTFFLYIHLAIFPPEYWPRGIRANGHLMLNGEKMAKSTGNFMTLR 734

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +L+E        + A   R+A+
Sbjct: 735 DLVE-------KYGADASRIAI 749


>gi|229116101|ref|ZP_04245493.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228667331|gb|EEL22781.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 517

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 71/428 (16%), Positives = 131/428 (30%), Gaps = 76/428 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQNLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    R     P   I D     +       ++F K               
Sbjct: 69  RFRKVPKNIDPSFAR-YIGMPYCDIPDPHGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQH 127

Query: 124 ---RATNHIPQMIYL---------IQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRR-- 168
              R+  +   ++           I      G  +E + E  +  +      G  +    
Sbjct: 128 AEYRSGRYNGNILEALHKRKEIYDILMRFKTGVHFEEDREKFYPVTLYCERCGKDATTIT 187

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
           + DE     R   +   +N    +    +  M+  W+  W      W IE          
Sbjct: 188 QFDEVLETVRYACECGNENELSVV---NTNKMKLNWKIDWPMR---WMIEDVIFEP---- 237

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFI 286
                  GG D         +++    +   + A  ++   F+ L+G   KMS S+GN I
Sbjct: 238 -------GGRDHSSETGSYNVSKEIVREIFNREAPYYVVYDFIGLKGNHEKMSSSSGNSI 290

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTS 343
           T ++LL       + +   VI        YR    F     + +        +   +  +
Sbjct: 291 TPSDLL-------KVYVPEVILFMF--AKYRPGAAFHIGLDEDVIRNYTEYERLKDSYEN 341

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           + + +  +  A+              KL+R   +  +  P FN  A  L +      + +
Sbjct: 342 EALKNEDLFDAI--------------KLSRVDNRFKEY-PKFNQVASTLPLLNFDSSILQ 386

Query: 404 NISIAIEK 411
           NI   I++
Sbjct: 387 NILEKIDR 394


>gi|227821928|ref|YP_002825898.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227340927|gb|ACP25145.1| arginyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 589

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 61/342 (17%), Positives = 114/342 (33%), Gaps = 75/342 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N       ++ R+        +
Sbjct: 136 PT--GPMHVGHCRGAVVGDALANLLAFAGYDVAKEYYINDAGSQIDVLARSAFLRYRQAL 193

Query: 93  NDAISII-------------TSKNTQQFVKDTTRLACLAPTHQ-PRATNH-IPQMIYLIQ 137
            + I  I                   +F    T L  +      P      I  M+ +I+
Sbjct: 194 GEEIGEIPAGLYPGDYLVPVGEALADEF---GTSLRIMPEDKWMPLVKERVIDAMMAMIR 250

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRVPEK----YHKKNPADF- 191
             +    A   N+++ F   ++ + G+   R  I++      V          + P D+ 
Sbjct: 251 EDLA---ALNVNHDVFFSERTLHDNGAARIRTAINDLTFKGHVYIGTLPPPKGQLPEDWE 307

Query: 192 ----ILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFD------IHGGG 237
                L++ +   +    P  +S              A    Y    FD      I+  G
Sbjct: 308 DREQTLFRSTEVGDDIDRPLIKSDGSYTY-------FAADVAYFKDKFDRGFQEMIYVLG 360

Query: 238 LDLIFPHHENE---IAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            D        E    A S    ++     +   ++ +   +     KMSK +G+F+T+ +
Sbjct: 361 ADHGGYVKRLEALARAISEGTAKLTVLLCQLVKLYRNGEPV-----KMSKRSGDFVTLRD 415

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTE 329
           +++             +R  ML   YR+   P+DF   ++TE
Sbjct: 416 VVDEVGRDP-------VRFMML---YRKNSEPLDFDFAKVTE 447


>gi|254787750|ref|YP_003075179.1| leucyl-tRNA synthetase [Teredinibacter turnerae T7901]
 gi|237683615|gb|ACR10879.1| leucine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 834

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 44/168 (26%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRL 327
           G +  +G KMSKS GN +   EL+         + A  +RL  M      + +++T   +
Sbjct: 584 GMVLKDGTKMSKSKGNTVDPAELIG-------QYGADTVRLFTMFAAPPEQSLEWTDSGV 636

Query: 328 TEAEILLSKWPQT------STSKGIIDPAV---------------LSALYND------LN 360
             A   L K  +T      +   G ++PA                ++ + +D       N
Sbjct: 637 EGAFRFLKKLWKTVQTHLAAGEPGELNPAELNDTQKDLRRKTHETIAKVTDDYGRRQTFN 696

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
           T  AI A+ +L  E  +N D            G+ V +E L   + + 
Sbjct: 697 T--AIAAVMELLNEVGRNADRANEQ-------GLSVEREALEAAVQVL 735


>gi|239813480|ref|YP_002942390.1| arginyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|239800057|gb|ACS17124.1| arginyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 561

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 61/359 (16%), Positives = 109/359 (30%), Gaps = 73/359 (20%)

Query: 11  LERKIT--EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRL--------LRYY 60
              +    EF + +P+       GP      H+G+ R   + D +  L         R +
Sbjct: 116 ATGEKVLVEFVSANPT-------GP-----LHVGHGRQAALGDAICNLRASQGDTVWREF 163

Query: 61  YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAP 119
           Y       ++ +           +   P  P  +              +D        + 
Sbjct: 164 YYNDAGVQIQTLAHSTQLRARGFKPGDPEWPSGEKAPAYNGDYIADIAEDFKAKKTVKSD 223

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKID-EQKM 175
             +  A+ +I      + +I     AY   E + ++        NY   S        + 
Sbjct: 224 DREYTASGNIDD----LDSIREFAVAYLRREQDLDLQAFRVRFDNYYLESSLYTSGRVEE 279

Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP-------GWESPWGRGRP--GWHIECSAMSSHY 226
             R      K    D  LW +ST             +  +    P   +HI   A     
Sbjct: 280 AVRKLVAAGKTYEQDGALWLKSTDYGDDKDRVMKKQDGTYTYFVPDVAYHI---AKWERG 336

Query: 227 LGKVFDIHGGGLDLIFPHHENEIA------QSCCADRIEKTANIWIHNGFLNL----EGR 276
             KV +I G        HH   IA      Q+      E   +  +H   + +    E  
Sbjct: 337 FHKVVNIQGTD------HH-GTIARVRAGLQAAGVGIPEGYPDYVLHT-MVRVMKGGEEV 388

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP-IDFTVQR-LTEAEIL 333
           K+SK  G+++T+ +L+E             +R  +L    R+P  ++T    L  A+  
Sbjct: 389 KISKRAGSYVTLRDLIEWT-------STDAVRFFLLS---RKPDTEYTFDVDLAVAKNN 437


>gi|91790322|ref|YP_551274.1| arginyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|122967265|sp|Q123B6|SYR_POLSJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91699547|gb|ABE46376.1| arginyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 561

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 60/350 (17%), Positives = 111/350 (31%), Gaps = 77/350 (22%)

Query: 4   KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
            +++ ++  R + EF + +P+       GP      H+G+ R   + D +  L      +
Sbjct: 112 GMQLADSPHRMVVEFVSANPT-------GP-----LHVGHGRQAALGDAICNLFDTQGWD 159

Query: 64  KCVTYVRN-----ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD-TTRLACL 117
               +  N     I  +      RA+   P                     D   +    
Sbjct: 160 VWREFYYNDAGVQIQTLATSTQARAKGLKPG-DAGWPEPAYNGDYIADIANDFLAKKTVK 218

Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQK 174
           +   +  A+  +  +   I+       AY   E + ++   +    NY   S        
Sbjct: 219 SDDREFTASGDVEDI-DAIRQFA---VAYLRHEQDLDLRAFSVRFDNYYLESS-----LY 269

Query: 175 MGTRVPE------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPG---------WHIEC 219
              RV           K    D  LW +ST      +    +G            +H+  
Sbjct: 270 SSGRVDSAVQKLKDAGKTYEQDGALWLKSTDYGDDKDRVMKKGDGSYTYFVPDVAYHL-- 327

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIA------QSCCADRIEKTANIWIHNGFLNL 273
            A       K  +I   G+D    HH   IA      Q+  A   +   +  +H   + +
Sbjct: 328 -AKWERGFSKAINIQ--GMD----HH-GTIARVRAGLQAASAGIPQGYPDYVLHT-MVRV 378

Query: 274 ----EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               E  K+SK  G+++T+ +L+E          A  +R  +L    R+P
Sbjct: 379 VRHGEEVKISKRAGSYVTLRDLIEWT-------SADAVRFFLLS---RKP 418


>gi|237743224|ref|ZP_04573705.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229433520|gb|EEO43732.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 712

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVSPADVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   L +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNILKQMSEAYRRIRNTAR 664


>gi|23099516|ref|NP_692982.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746073|sp|Q8EPN2|SYV_OCEIH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22777745|dbj|BAC14017.1| valyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 883

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 11/133 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ PAD   W++   +   W S   W     GW  E SA    Y      +   G D+I
Sbjct: 436 GKEAPADIENWEQDEDVLDTWFSSALWPFSTMGWPNEDSADLKRYFPTN--VLVTGYDII 493

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS      +   +  +H    + +GRKMSKS GN +   +++E        
Sbjct: 494 FFWVSRMIFQSKEFMNEKPFEDTLLHGLIRDADGRKMSKSLGNGVDPMDVIE-------K 546

Query: 302 WPAPVIRLAMLMT 314
           + A  +R  ++  
Sbjct: 547 YGADSLRYFLMTG 559


>gi|67594615|ref|XP_665813.1| KIAA1352 protein [Cryptosporidium hominis TU502]
 gi|54656652|gb|EAL35581.1| KIAA1352 protein [Cryptosporidium hominis]
          Length = 624

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D    G DLIF H      N  A     DR +     +  NG + ++  KMSKS GN+
Sbjct: 418 PLDCRVSGKDLIFNHLTMCLYNHAAIWE--DRKDLWPRSFYCNGHVMIDSMKMSKSTGNW 475

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           IT+ +       G   + A   R+A+
Sbjct: 476 ITLED-------GINEYSADACRIAL 494


>gi|322709731|gb|EFZ01306.1| leucyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 1123

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KM+KS GNF+T+ 
Sbjct: 710 PLDVRSSGKDLIPNHLTFFLYIHLAIFPPEYWPRGIRANGHLMLNGEKMAKSTGNFMTLR 769

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +L+E        + A   R+A+
Sbjct: 770 DLVE-------KYGADASRIAI 784


>gi|255322407|ref|ZP_05363553.1| isoleucyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300780|gb|EET80051.1| isoleucyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 918

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC A       ++  H   ++  G+KMSKS GN +   ++        +++   ++RL +
Sbjct: 585 SCAAQGRAPYRSVLTHGFTVDENGQKMSKSKGNVVAPADV-------AKTYGVEILRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++ Y   +  +   L +      K   T
Sbjct: 638 ALSDYSSDLKISENILKQVSEQYRKIRNT 666


>gi|119719481|ref|YP_919976.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524601|gb|ABL77973.1| leucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 977

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 57/149 (38%), Gaps = 20/149 (13%)

Query: 208 WGRGRPGWHIECSAMSSHYLGK---------VFDIHGGGLDLIFPHHENEIAQSCCADRI 258
            G+G PG   E + +    L +           D+   G DLI  H    I         
Sbjct: 580 LGKGDPGSVAERTGIPKELLEEMRKEFLYWYPVDMRVSGKDLIGNHLVFFIMHHVAIFPE 639

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E        NG++ + G+KMSKS GNFI + E LE        W A   R A        
Sbjct: 640 EHWPRGIGVNGWVLVAGKKMSKSAGNFILLREALE-------YWGADATRFAEAYAG-NS 691

Query: 319 PID---FTVQRLTEAEILLSKWPQTSTSK 344
            +D   F  +  ++A  LL +W + + + 
Sbjct: 692 GLDDGNFEPEVASKAVDLLYEWYEFAVNN 720


>gi|268592113|ref|ZP_06126334.1| isoleucine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291312509|gb|EFE52962.1| isoleucine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 936

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 60/169 (35%), Gaps = 34/169 (20%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL +
Sbjct: 576 STAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQDVMNKLG-------ADILRLWV 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN----------- 360
             T Y   I  + + L  A     +   T+          L A  N  N           
Sbjct: 629 ASTDYTGEIAVSDEILKRAADSYRRIRNTAR--------FLLANLNGFNPETDMVKPEDM 680

Query: 361 -------TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                     A++A  ++A+ +   +D L +     H   IE+   +L+
Sbjct: 681 VVLDRWAVSRALEAQQEIAK-AYDEYDFLSVIQRLMHFCSIEMGSFYLD 728


>gi|163795498|ref|ZP_02189464.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
 gi|159179097|gb|EDP63630.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
          Length = 515

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 42/130 (32%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  D L R  R    +     V  +T  D+      + E  +     
Sbjct: 14  VNDKPHIGHAYTTLACDALARFKRLDGYD-----VMFLTGTDEH---GQKVEAAADAAGV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + +Q F      + C       R T   H+  +  L + +   GH Y  +   
Sbjct: 66  DPQSFTDRVSQNFRDLIGVMNCSTDDF-IRTTEPRHVTAVQALWRRLKEKGHIYLGSYAG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYSVRDEAFY 134



 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +E    ++ H G+  +EG+KMSKS GN I    L
Sbjct: 255 DLHMVGKDILRFHAVYWPAFLMGA-GLEVPKRVFAH-GWWTVEGQKMSKSLGNAIDPAAL 312

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           ++T       +     R  ML
Sbjct: 313 VDT-------YGLDQFRYFML 326


>gi|149194837|ref|ZP_01871931.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134996|gb|EDM23478.1| leucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 819

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 15/120 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +         +  E  A + +  G +  +G KMSKS G
Sbjct: 535 PVDQYIGGIEHAILHLLYARFFTKALRDLGYVNLDEPFAKL-LTQGMVLKDGAKMSKSKG 593

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + ++++   +  A   L++  Q ++
Sbjct: 594 NVVDPDEIVE-------KYGADTARLFILFAAPPEQELEWSDSAVEGAYRFLNRLYQNAS 646



 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 20/139 (14%)

Query: 14  KITEFQAID----PSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           K   F+  +    P    + M+   P      H+G+ R   + D + R  R         
Sbjct: 19  KEEAFEPKEDYTLPKKYILSMF---PYPSGRIHMGHVRNYSIGDAIARYYRKKGF----- 70

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT- 126
              N+             E+ +I         T +N     K+  RL       +  AT 
Sbjct: 71  ---NVLHPIGWDSFGMPAENAAIKHGVHPKKWTYENIDYMRKELNRLGLSFSKKREFATS 127

Query: 127 --NHIPQMIYLIQNIILHG 143
              +       I  +  +G
Sbjct: 128 DPEYTRWEQEFIIKMYENG 146


>gi|72119932|gb|AAZ62195.1| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 888

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 41/142 (28%), Gaps = 15/142 (10%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + DV+ R LR       +          D
Sbjct: 48  PDGKEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGW------D 101

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
                A  E+ ++    A +  T  N     K    +  LA           P      Q
Sbjct: 102 AFGMPA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYRWNQ 158

Query: 138 ----NIILHGHAYEANNEIIFD 155
                ++  G AY     + +D
Sbjct: 159 WLFLKMLEKGIAYRKTGTVNWD 180


>gi|46123263|ref|XP_386185.1| hypothetical protein FG06009.1 [Gibberella zeae PH-1]
          Length = 1116

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 702 PLDVRVSGKDLIPNHLSMHLYCHTALFPREYWPRSIRANGHLMLNGEKMSKSTGNFMTLR 761

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +L        + + A   R+A+
Sbjct: 762 DL-------TQKYGADASRIAL 776


>gi|284928619|ref|YP_003421141.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809078|gb|ADB94783.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 868

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 44/159 (27%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R  R       V +              A      I  
Sbjct: 52  PYPSGNLHMGHVRNYVITDVIARFKRLQGY--SVLHPMGWDAFGLPAENAA------IDR 103

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
             +    T KN  +  +    L  L+   +   T   P      Q         G AY+ 
Sbjct: 104 GISPEEWTKKNIAKMRQQLQSLG-LSIDWEREITTCSPSYYKWTQWLFLQFYKVGLAYQK 162

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D +    R   K  KK
Sbjct: 163 EATVNWDPVDQT----VLANEQVDTEGYSWRSGAKVEKK 197


>gi|255947056|ref|XP_002564295.1| Pc22g02510 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211591312|emb|CAP97539.1| Pc22g02510 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 1125

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 55/159 (34%), Gaps = 25/159 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 715 PLDVRVSGKDLIQNHLTFFLYIHIALFPKEYWPRGVRANGHLLLNGEKMSKSTGNFLTLK 774

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI--------LLSKWPQTS 341
           + ++        + A   R+A       + I+       E+           L +W +  
Sbjct: 775 DSVD-------KFGADATRIAFADAG--DSIE--DANFEESVANSNILRLYTLKEWIEEV 823

Query: 342 TSKGIIDPAVLSALYND-LNTVSAIQALHKLARESTKNH 379
                +      A  +   N       L+ L RE+ K++
Sbjct: 824 VKDEALRTGPADAFADKLFN-----NELNSLVRETQKHY 857


>gi|260495297|ref|ZP_05815424.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197075|gb|EEW94595.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 933

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVSPADVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   L +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNILKQMSEAYRRIRNTAR 664


>gi|119504404|ref|ZP_01626484.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119459912|gb|EAW41007.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 863

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 56/150 (37%), Gaps = 38/150 (25%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMT 314
           +  E    + +  G +  +G KMSKS GN +   EL++        + A  +RL  M   
Sbjct: 603 NSDEPFRRL-LTQGMVLKDGTKMSKSRGNTVDPQELIDR-------YGADTVRLFSMFAA 654

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGIIDPAVLS---------- 353
              + ++++   +  A   L +  +           T+     +D A  +          
Sbjct: 655 PPEQSLEWSDSGVEGANRFLRRLWRMVSEHISQGSVTNIEASELDKAQKALRRKTHETIG 714

Query: 354 ALYND------LNTVSAIQALHKLARESTK 377
            + +D       NT  AI A+ +L  E +K
Sbjct: 715 KVDDDYGRRQTFNT--AIAAVMELCNEVSK 742


>gi|222053500|ref|YP_002535862.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|221562789|gb|ACM18761.1| isoleucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 924

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 35/208 (16%), Positives = 64/208 (30%), Gaps = 51/208 (24%)

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW--KRSTPMEPGWESPWGRGRPGWHIEC 219
           Y       + + K+   V + + K++     +W  + +  + P                C
Sbjct: 472 YCKACGEALADGKIMHHVADLFEKESSD---IWYEREAKELLPT------------GTTC 516

Query: 220 SAMSSHYLGKVFDIH------GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
            A       K  DI       G     +  H +N  + +            W H+  L  
Sbjct: 517 PACGKTEFDKEMDILDVWFDSGVSHAAVLEHRDNLSSPADMYLEGSDQHRGWFHSSLLAS 576

Query: 274 ---------------------EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                                 GRKMSKS GN +   +++       + + A V+RL + 
Sbjct: 577 VGTRGVAPYKAVLTHGFVVDGSGRKMSKSVGNVVAPEDVI-------KKYGAEVLRLWVA 629

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
              YR+ +  + + LT       +   T
Sbjct: 630 AQDYRDDLRISQEILTRLSEAYRRIRNT 657


>gi|116754113|ref|YP_843231.1| leucyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694617|sp|A0B7B7|SYL_METTP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116665564|gb|ABK14591.1| leucyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 950

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +                  NGF++LEG+KMSKS G  +T+ 
Sbjct: 582 PVDLRTSGKDLVANHLLFFLYHHVAIFPESLWPRAIAVNGFVSLEGQKMSKSRGPILTLK 641

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           + +           A V RL +L    Y +  D+           + ++   +  
Sbjct: 642 QAVAENG-------ADVTRLYILANAEYTQDADWRNDGAQATRGQVERFYTLARE 689


>gi|253988036|ref|YP_003039392.1| isoleucyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253779486|emb|CAQ82647.1| isoleucyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 937

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
           S + G   DI+  G D       + +  S           +  H   ++ +GRKMSKS G
Sbjct: 549 SEFQGNSADIYLEGSDQHRGWFMSSLMISTSMKGKAPYRQVLTHGFTVDGQGRKMSKSIG 608

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N I+  ++++          A ++RL +  T Y   I  + + L  +     +   T+ 
Sbjct: 609 NTISPQDVMDKLG-------ADILRLWVASTDYTGEIAVSDEILKRSADAYRRIRNTAR 660


>gi|134302194|ref|YP_001122163.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166200210|sp|A4IYP1|SYI_FRATW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134049971|gb|ABO47042.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 935

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N V+ I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPVTDIIEFDKLVK 680


>gi|89255846|ref|YP_513208.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314333|ref|YP_763056.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156501826|ref|YP_001427891.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010068|ref|ZP_02274999.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|122325634|sp|Q0BNB5|SYI_FRATO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123287343|sp|Q2A4Z4|SYI_FRATH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200208|sp|A7NAD2|SYI_FRATF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89143677|emb|CAJ78876.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129232|gb|ABI82419.1| isoleucine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156252429|gb|ABU60935.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
          Length = 935

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N V+ I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPVTDIIEFDKLVK 680


>gi|256027633|ref|ZP_05441467.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765591|ref|ZP_06524969.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717146|gb|EFD81158.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 933

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVSPADVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   L +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNILKQMSEAYRRIRNTAR 664


>gi|298529743|ref|ZP_07017146.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
 gi|298511179|gb|EFI35082.1| leucyl-tRNA synthetase [Desulfonatronospira thiodismutans ASO3-1]
          Length = 834

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 16/128 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H             +      E  AN+ +  G +  +G KMSKS G
Sbjct: 534 PVDQYIGGIEHAILHLLYARFFVKALRDLGYWDLNEPFANL-LTQGMVLKDGAKMSKSKG 592

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++       R + A  +RL  L  +   + ++++   +  +   L++ W    
Sbjct: 593 NVVDPDEMI-------RRFGADTVRLYCLFASPPEKDLEWSDSAIEGSYRFLNRLWRTVH 645

Query: 342 TSKGIIDP 349
              G+I P
Sbjct: 646 ELSGVISP 653


>gi|218885370|ref|YP_002434691.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|254782391|sp|B8DPD6|SYI_DESVM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218756324|gb|ACL07223.1| isoleucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 938

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +     +  H   ++ EGRKMSKS GN I   E+++        + A ++RL +    Y
Sbjct: 586 GVPPYRAVLTHGYVVDGEGRKMSKSIGNVIAPQEIID-------KYGAEILRLWVASVDY 638

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           RE I  + + L+       +   T
Sbjct: 639 REDIRISDEILSRLVDAYRRIRNT 662


>gi|56708016|ref|YP_169912.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670487|ref|YP_667044.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|224457097|ref|ZP_03665570.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|254370499|ref|ZP_04986504.1| hypothetical protein [Francisella tularensis subsp. tularensis
           FSC033]
 gi|254874815|ref|ZP_05247525.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|81820780|sp|Q5NGD0|SYI_FRATT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122970960|sp|Q14HT2|SYI_FRAT1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56604508|emb|CAG45548.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320820|emb|CAL08931.1| Isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568742|gb|EDN34396.1| hypothetical protein FTBG_00275 [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840814|gb|EET19250.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           MA00-2987]
 gi|282159204|gb|ADA78595.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 935

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N V+ I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPVTDIIEFDKLVK 680


>gi|328953428|ref|YP_004370762.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328453752|gb|AEB09581.1| leucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 832

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 41/153 (26%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G + ++G KMSKS GN +  NEL+ T       + A   RL  L      
Sbjct: 565 EPFTRL-LTQGMVLMDGAKMSKSKGNVVDPNELIGT-------YGADTTRLFCLFAAPPE 616

Query: 318 EPIDFTVQRLTEAEILLSKW-------------------------PQTSTSKGIIDPAVL 352
           + ++++ Q +  A   L++                          P+    +  +   + 
Sbjct: 617 KDLEWSDQGVAGAFRFLNRIWSLVKELLESLKSAPPWRGTGAELSPELRRLRQKVHQTIH 676

Query: 353 SALYND-----LNTVSAIQALHKLARESTKNHD 380
            A  +       NT  AI AL +L  +  K  +
Sbjct: 677 RATSDIEARFHFNT--AIAALMELVNDLYKARE 707


>gi|95930673|ref|ZP_01313407.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95133325|gb|EAT14990.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 510

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 42/124 (33%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  +    E        +T  D+      + E  +I   +
Sbjct: 14  VNDVPHIGHAYTTLACDVLARYKKARGYEVFF-----LTGTDEH---GQKVEKAAIAAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +  Q+F     +L     T   R T   H   +  +   I   G  Y    E 
Sbjct: 66  TPLELADRVMQRFAALWQKLNIDN-TDFIRTTQQRHKEGVQKMFTQIQEQGDIYLGAYED 124

Query: 153 IFDT 156
            + T
Sbjct: 125 WYCT 128


>gi|268679124|ref|YP_003303555.1| isoleucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617155|gb|ACZ11520.1| isoleucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 918

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + I   A I  H   ++ +G KMSKS GN +  +++        + +   ++RL +
Sbjct: 586 STANNGIAPYAKILTHGFTVDEKGEKMSKSKGNVVAPSDV-------AKQYGVEILRLWV 638

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y   +  +   L +      K   T
Sbjct: 639 GTSEYTTDLKISDNILKQISEQYRKIRNT 667


>gi|187931314|ref|YP_001891298.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|254782406|sp|B2SF88|SYI_FRATM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187712223|gb|ACD30520.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 935

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N V+ I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPVTDIIEFDKLVK 680


>gi|254368674|ref|ZP_04984688.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
 gi|157121589|gb|EDO65766.1| isoleucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC022]
          Length = 935

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 15/155 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      +  +  +  A   +    ++ H   ++  GRKM
Sbjct: 541 CILDLDKRLSYPADLYLEGSDQHRGWFQTSLLVAMSAKGSQPYKEVFTHGFVVDEHGRKM 600

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN  +  ++  T         A ++RL    T Y+  +  + Q L        +  
Sbjct: 601 SKSLGNVTSPQDIYNTLG-------ADILRLWTASTDYKSEMAVSDQILKRTADTYRRLR 653

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            T+          L +  +  N V+ I    KL +
Sbjct: 654 NTAR--------FLLSNLDGFNPVTDIIEFDKLVK 680


>gi|126649165|ref|XP_001388255.1| hypothetical protein [Cryptosporidium parvum Iowa II]
 gi|126117177|gb|EAZ51277.1| conserved hypothetical protein [Cryptosporidium parvum Iowa II]
          Length = 632

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D    G DLIF H      N  A     DR +     +  NG + ++  KMSKS GN+
Sbjct: 418 PLDCRVSGKDLIFNHLTMCLYNHAAIWE--DRKDLWPRSFYCNGHVMIDSMKMSKSTGNW 475

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           IT+ +       G   + A   R+A+
Sbjct: 476 ITLED-------GINEYSADACRIAL 494


>gi|298676112|ref|YP_003727862.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298289100|gb|ADI75066.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 679

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 42/120 (35%), Gaps = 12/120 (10%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  I  D+  R L+ +   + VT+V         I+  A +   
Sbjct: 13  TCGLPYANGKAHIGHLRTYIPADIYVRALKKHG--QDVTFVCGSDTHGTPIVFNAEE--- 67

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHAY 146
               N     +     + F      +            ATNH      ++  +I +G+ Y
Sbjct: 68  ---YNTTPEELIKTYHKHFDDIFKSMNVYFDAFGTTEDATNHNRTH-AIVNKLIDNGYVY 123


>gi|297849262|ref|XP_002892512.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338354|gb|EFH68771.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1091

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 58/195 (29%), Gaps = 49/195 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG + L   KMSKS GNF T+ 
Sbjct: 666 PLDLRVSGKDLIQNHLTFFIYNHTALMANRNWPRGIRCNGHIMLNSEKMSKSTGNFRTLR 725

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E        + A   R ++                                 G+ D 
Sbjct: 726 QAIE-------EFSATATRFSL----------------------------ADAGDGVDDA 750

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
             +        T +A  A+ KL +E T   ++L   ++    L       + +K     +
Sbjct: 751 NFV------FETANA--AILKLTKELTWMEEVLAAESS----LRTGPPSTYADKVFENDM 798

Query: 410 EKLVQERLILLKMKK 424
              +  RL     K 
Sbjct: 799 N--IAIRLTERAYKD 811


>gi|296810440|ref|XP_002845558.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238842946|gb|EEQ32608.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 980

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 40/154 (25%), Gaps = 22/154 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  +               D+   +   A     E+ +I      
Sbjct: 92  HMGHVRVYTISDVLARYKQMKGY-----------DVLHPMGWDAFGLPAENAAIERGIHP 140

Query: 97  SIITSKNTQQFVKDTTRLACL---APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI- 152
              T +N          L             A         L   +   G AY+A   + 
Sbjct: 141 EGWTKQNIANMKDQLKDLGIRFDWDAEVMTCAPEFYKHTQKLFLKLHEKGLAYQAEALVN 200

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                        +  ++D      R   K  K+
Sbjct: 201 YDPVDKT----VLANEQVDANGCSWRSGAKVEKR 230


>gi|83721013|ref|YP_441758.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83654838|gb|ABC38901.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 882

 Score = 51.4 bits (122), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 45/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 43  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 97

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T  N     K    +  LA       T   P
Sbjct: 98  ------DAFGMPA--ENAAMANGVPPAQWTYDNIAYMKKQMQSMG-LAIDWSREVTTCKP 148

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 149 DYYKWNQWLFLKMLEKGIAYKKTGTVNWD 177


>gi|194290700|ref|YP_002006607.1| leucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|193224535|emb|CAQ70546.1| leucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 879

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 41/142 (28%), Gaps = 15/142 (10%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + DV+ R LR       +          D
Sbjct: 39  PDGKEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGW------D 92

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
                A  E+ ++    A +  T  N     K    +  LA           P      Q
Sbjct: 93  AFGMPA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYRWNQ 149

Query: 138 ----NIILHGHAYEANNEIIFD 155
                ++  G AY     + +D
Sbjct: 150 WLFLKMLEKGIAYRKTGTVNWD 171


>gi|167580573|ref|ZP_02373447.1| leucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 864

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 45/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T  N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYDNIAYMKKQMQSMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|260596444|ref|YP_003209015.1| isoleucyl-tRNA synthetase [Cronobacter turicensis z3032]
 gi|260215621|emb|CBA27886.1| Isoleucyl-tRNA synthetase [Cronobacter turicensis z3032]
          Length = 938

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTSEMAVSDEILKRAADSYRRIRNTAR 660


>gi|189083244|sp|Q2SZ91|SYL_BURTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 864

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 45/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T  N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYDNIAYMKKQMQSMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|28572916|ref|NP_789696.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|28411049|emb|CAD67434.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 583

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A  ++V DV  R  R    +   T+  + TD     + RA +E    P   
Sbjct: 12  VNDIPHIGHAYTLVVSDVFARWQRQSGKD---TFFLSGTDEHGLKVLRAAEEKNMTPQGW 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++ +       K    L  ++     R T   H  ++ + I  +  + + Y      
Sbjct: 69  ADLMVKTAW-----KPLLDLMHISNDDFVRTTESRHRERVKWFINRLRENQYIYSGQYSG 123

Query: 153 IFDTS 157
            +  S
Sbjct: 124 YYCVS 128



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 17/84 (20%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +     I+ H G+L ++G+KMSKS    I   +L +        +    +R   L  
Sbjct: 350 AAGLPVPEKIFAH-GWLLVDGQKMSKSKLTGIKPQDLTDI-------FGVDAVRYYFL-- 399

Query: 315 HYREPI-----DFTVQRLTEAEIL 333
             R+P+      F+++ +      
Sbjct: 400 --RQPVFGQDYSFSIESIAACYNS 421


>gi|116205303|ref|XP_001228462.1| hypothetical protein CHGG_10535 [Chaetomium globosum CBS 148.51]
 gi|88176663|gb|EAQ84131.1| hypothetical protein CHGG_10535 [Chaetomium globosum CBS 148.51]
          Length = 1120

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    +         E        NG L L G KMSKS GNF+T+N
Sbjct: 707 PLDIRCSGKDLIPNHLTFWLYNHIALFPREYWPRSVRANGHLQLNGEKMSKSTGNFMTLN 766

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +++       + + A   R+A+
Sbjct: 767 DVV-------QKYGADAARVAL 781


>gi|302381491|ref|YP_003817314.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
 gi|302192119|gb|ADK99690.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
          Length = 865

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 13/143 (9%)

Query: 18  FQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F   D    + YV    P      H+G+AR  ++ DV+ R  R    +  V +     D 
Sbjct: 27  FVTRDTGRPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARHKRAQGYD--VLHPMGW-DA 83

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQM 132
                E A  E    P        T  N  Q       L       +  AT    +  + 
Sbjct: 84  FGMPAENAAMERGIHPKG-----WTYDNIAQMRAQLKLLGLSLDWSREFATCDPEYYGKQ 138

Query: 133 IYLIQNIILHGHAYEANNEIIFD 155
                 +   G  Y  +  + +D
Sbjct: 139 QAWFLELYRRGLVYRKDGTVNWD 161


>gi|313901901|ref|ZP_07835320.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467842|gb|EFR63337.1| Isoleucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 939

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EGRKMSKS GN +  N+++       R + A V+RL  
Sbjct: 571 AVATRGRAPYRAVLTHGFVVDGEGRKMSKSLGNVVDPNDVI-------RRYGADVLRLWA 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
           + + YR  +  +   L +   +  K   T      + G  DPA
Sbjct: 624 VSSDYRGDVRISEDILKQMAEVYRKIRNTLRFLLANLGDFDPA 666


>gi|312115063|ref|YP_004012659.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311220192|gb|ADP71560.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 523

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 44/128 (34%), Gaps = 15/128 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   +  D + R  R          V  +T +D+  ++    +  +       + 
Sbjct: 22  PHIGHAYEAVATDAMARFKRLDG-----HPVFFLTGVDEHGLK---MKQTAAKEGITPTE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
           +  +NT +F++   +L           +PR    + ++      +   G  Y A  +  +
Sbjct: 74  LADRNTAKFIEMLEQLDVSYDDFIRTTEPRHHESVAEIWR---RMEKAGDIYLAGYKGWY 130

Query: 155 DTSSIPNY 162
                  Y
Sbjct: 131 SVRDEAFY 138


>gi|85859641|ref|YP_461843.1| methionyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722732|gb|ABC77675.1| methionyl-tRNA synthetase / protein secretion chaperonin
           [Syntrophus aciditrophicus SB]
          Length = 644

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV DVL R  R         ++    +  DKI E A +         
Sbjct: 24  VNASPHIGHAYTTIVADVLARYHRLSG--HRTFFLTGTDEHGDKIAEAAEKN------GI 75

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      + + QF      L+     +  R T+  HI  +  ++  +   G  Y  + E 
Sbjct: 76  SPKAYADRISSQFRNLWPELSVSN-DYFIRTTDANHIATVQAILSKVYEAGDIYFGHYEG 134

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 135 FYCVGCERFY 144


>gi|282897037|ref|ZP_06305039.1| Lysyl-tRNA synthetase 1 (Lysine--tRNA ligase 1) [Raphidiopsis
           brookii D9]
 gi|281197689|gb|EFA72583.1| Lysyl-tRNA synthetase 1 (Lysine--tRNA ligase 1) [Raphidiopsis
           brookii D9]
          Length = 520

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 41/157 (26%), Positives = 58/157 (36%), Gaps = 13/157 (8%)

Query: 200 MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
              GW SP  G G+  W +E  A     LG    I   G D        ++A + C   +
Sbjct: 202 GHSGWLSPLNGNGKLPWKVEWVA-KWDVLGVT--IEMAGKDHSQKGGSRDVANAICRQVL 258

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           EK         F+ + G KMS S G   +  E+           P  ++R  ML T  R 
Sbjct: 259 EKQPPFHSPYEFILVNGTKMSSSKGVGSSAREI-------ANLLPPELLRFLMLRTQPRT 311

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
            I+F      E    L +   T  SK  ++P +   L
Sbjct: 312 VINFAPN--YETITRLFRDYDTLISKYEVNPELTEEL 346



 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 35/101 (34%), Gaps = 10/101 (9%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI- 92
           T     H+G+ R +++ DV+YR L++       TY  +  D  D + +   +E     + 
Sbjct: 22  TPSGRVHVGSLRGVVIHDVIYRALKHAGKPVKFTYGVDDYDALDTVPKYLDREKFKPYLG 81

Query: 93  ---------NDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
                     +           +F +    L     T+  R
Sbjct: 82  FPLCNVPSPGEGAPDYAKYFINEFFEIFEYLGIQPETYFLR 122


>gi|257464108|ref|ZP_05628491.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061625|ref|ZP_07926110.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687301|gb|EFS24136.1| isoleucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 931

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 62/157 (39%), Gaps = 20/157 (12%)

Query: 257 RIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                  I  H GF+N   G KMSKS GN +   +++       + + A ++RL      
Sbjct: 583 GTAPFKKILTH-GFVNDGKGEKMSKSKGNVVAPEKII-------KQYGADILRLWCASVD 634

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           YRE +  +   + +      +   T+     +    DP   +  Y DL  +     LHKL
Sbjct: 635 YREDVKISDNIVKQMAETYRRVRNTARYILGNSYGFDPKKDAVPYQDLLEIDKWA-LHKL 693

Query: 372 ------ARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                   ES + ++   +F    +  GI++   +L+
Sbjct: 694 EMLKKSVGESYEKYEFYNVFQEIHYFAGIDMSAFYLD 730


>gi|258542241|ref|YP_003187674.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256633319|dbj|BAH99294.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
 gi|256636378|dbj|BAI02347.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
 gi|256639431|dbj|BAI05393.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
 gi|256642487|dbj|BAI08442.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
 gi|256645542|dbj|BAI11490.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
 gi|256648595|dbj|BAI14536.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
 gi|256651648|dbj|BAI17582.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256654639|dbj|BAI20566.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
          Length = 512

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 38/132 (28%), Gaps = 11/132 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I  DV+ R  R    E        +T  D+      + E  +     
Sbjct: 14  VNGAPHIGHAYTSIAADVMARFHRLAGDEVFF-----LTGTDEH---GQKVEQAAQANGT 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  K +  F      +         R T   HI     L + +  +G  Y    E 
Sbjct: 66  DAKSFADKVSADFRNMADAMNISYDDF-IRTTEPRHITSTQALWKKVADNGAIYLGAYEG 124

Query: 153 IFDTSSIPNYGS 164
            +       YG 
Sbjct: 125 WYALRDECFYGE 136



 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 12/54 (22%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           +  AN W       +EG+KMSKS GN +   +L+       + +    +R  +L
Sbjct: 286 KVFANGWW-----TIEGQKMSKSLGNVVDPRDLV-------KEFGLDAVRFFLL 327


>gi|289577361|ref|YP_003475988.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289527074|gb|ADD01426.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 633

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 74/434 (17%), Positives = 134/434 (30%), Gaps = 116/434 (26%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG++   +  D + R  R    +  V ++   TD   + I+R  +E    P     
Sbjct: 16  DKLHIGHSYTTVAADAMARFKRLTGYD--VKFLTG-TDEHGQKIQRIAKEKGMSPKEYVD 72

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLI-QNIILHGHAYEANNEIIF 154
            I+  +  +   K       ++     R T+ +  +++  I   +   G  Y++  E  +
Sbjct: 73  GIV--EWIKNLWKIMD----ISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSEYEGWY 126

Query: 155 DTS--------------------------------SIPNYGS---------------FSR 167
            T                                  +  YG                 SR
Sbjct: 127 CTPCESFWTESQLVDGKCPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEHPDFIQPESR 186

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG-----W-----ESPWGRGRPGWHI 217
           R      + + + + +  ++  D   W    P +P      W           G   +H 
Sbjct: 187 RNEMINFIKSGLEDLFVSRSSFD---WGIKVPFDPKHVIYVWIDALSNYITALGYSTYHD 243

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           +       Y     D+H  G +++  H     A     D           +G+L LEG K
Sbjct: 244 DDF---KKYWPA--DVHLVGKEIMRFHTIIWPAMLMALDL--PLPKKVFGHGWLILEGGK 296

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL--------- 327
           MSKS GN +   EL+         +    +R  +L    +     F+ + L         
Sbjct: 297 MSKSKGNVVDPKELVS-------KYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLA 349

Query: 328 TEAEILLSK---WPQTSTSKGIIDPAVLSALYNDL-NTV-----------------SAIQ 366
            +   LLS+     +      +  P+    + +DL NT                  +A+ 
Sbjct: 350 NDFGNLLSRTVTMIEKYFGGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALI 409

Query: 367 ALHKLARESTKNHD 380
            + KL R + K  D
Sbjct: 410 EIWKLVRRANKYID 423


>gi|161611254|ref|YP_297039.2| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|189083223|sp|Q46XD8|SYL_RALEJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 873

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 41/142 (28%), Gaps = 15/142 (10%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + DV+ R LR       +          D
Sbjct: 33  PDGKEKPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGW------D 86

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
                A  E+ ++    A +  T  N     K    +  LA           P      Q
Sbjct: 87  AFGMPA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYRWNQ 143

Query: 138 ----NIILHGHAYEANNEIIFD 155
                ++  G AY     + +D
Sbjct: 144 WLFLKMLEKGIAYRKTGTVNWD 165


>gi|307824800|ref|ZP_07655023.1| isoleucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307734158|gb|EFO05012.1| isoleucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 943

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 11/145 (7%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      ++ +  S   + +     +  H   ++ +G+KM
Sbjct: 550 CVLEKREQLSFPADLYLEGSDQHRGWFQSSLLASVAMNEVAPYKAVLTHGFTVDADGKKM 609

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +    ++       ++  A V+RL +  T YR  +  + + L        +  
Sbjct: 610 SKSKGNVVAPQSVM-------KNLGADVLRLWVAATDYRGEMTVSDEILNRTSDGYRRLR 662

Query: 339 QTS----TSKGIIDPAVLSALYNDL 359
            T+    ++    DPA  +    DL
Sbjct: 663 NTARFLLSNLDDFDPAQHAVEDKDL 687


>gi|296814834|ref|XP_002847754.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840779|gb|EEQ30441.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 1127

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRISGKDLIQNHLTFFLYIHIALFPREYWPRGVRANGHLLLNGEKMSKSTGNFLTLR 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|326469463|gb|EGD93472.1| leucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 1127

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRISGKDLIQNHLTFFLYIHIALFPREYWPRGVRANGHLLLNGEKMSKSTGNFLTLR 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|94311905|ref|YP_585115.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987833|sp|Q1LJ30|SYL_RALME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|93355757|gb|ABF09846.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 873

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 39/142 (27%), Gaps = 15/142 (10%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + DV+ R LR     + V           
Sbjct: 33  PDGKEKSKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRM--NGRNVLMPMGWDAFGM 90

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
                A      +    A +  T  N     K    +  LA           P+     Q
Sbjct: 91  PAENAA------LNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPEYYRWNQ 143

Query: 138 ----NIILHGHAYEANNEIIFD 155
                ++  G AY     + +D
Sbjct: 144 WLFLKMLEKGIAYRKTGTVNWD 165


>gi|326484431|gb|EGE08441.1| leucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 1127

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRISGKDLIQNHLTFFLYIHIALFPREYWPRGVRANGHLLLNGEKMSKSTGNFLTLR 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|261346442|ref|ZP_05974086.1| isoleucine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282565426|gb|EFB70961.1| isoleucine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 936

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  E++           A ++RL +
Sbjct: 576 STAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQEVMNKLG-------ADILRLWV 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
             T Y   I  + + L  A     +   T+          L A  N  N          +
Sbjct: 629 ASTDYTGEIAVSDEILKRAADSYRRIRNTAR--------FLLANLNGFNPETDMVKPEDM 680

Query: 366 QALHKLA--------RESTKN---HDLLPIFNASAHILGIEVCKEHLN 402
             L + A        +E TK    +D L +     H   IE+   +L+
Sbjct: 681 VVLDRWAVGRALEAQKEITKAYDEYDFLGVIQRLMHFCSIEMGSFYLD 728


>gi|254190924|ref|ZP_04897430.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254259088|ref|ZP_04950142.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|189083243|sp|Q3JNN1|SYL_BURP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157938598|gb|EDO94268.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|254217777|gb|EET07161.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 864

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQSMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGVAYKKTGTVNWD 159


>gi|53720546|ref|YP_109532.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126451947|ref|YP_001067687.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167740200|ref|ZP_02412974.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
 gi|167904281|ref|ZP_02491486.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|217420600|ref|ZP_03452105.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242314927|ref|ZP_04813943.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254199150|ref|ZP_04905565.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|254299271|ref|ZP_04966721.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|60390678|sp|Q63QT6|SYL_BURPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230618|sp|A3NZB6|SYL_BURP0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52210960|emb|CAH36948.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126225589|gb|ABN89129.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157808838|gb|EDO86008.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|169656980|gb|EDS88377.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|217396012|gb|EEC36029.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|242138166|gb|EES24568.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 864

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQSMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGVAYKKTGTVNWD 159


>gi|212534296|ref|XP_002147304.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
 gi|210069703|gb|EEA23793.1| leucyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
          Length = 1124

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRVSGKDLIQNHLTFFLYIHIALFPQEYWPRGVRSNGHLLLNGEKMSKSTGNFLTLK 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|76808938|ref|YP_334822.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|76578391|gb|ABA47866.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
          Length = 913

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 74  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 128

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 129 ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQSMG-LAIDWSREVTTCKP 179

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 180 DYYKWNQWLFLKMLEKGVAYKKTGTVNWD 208


>gi|315124571|ref|YP_004066575.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018293|gb|ADT66386.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 376

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 94  SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 152

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 153 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 205

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 206 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 265

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 266 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 319


>gi|304309975|ref|YP_003809573.1| Isoleucyl-tRNA synthetase [gamma proteobacterium HdN1]
 gi|301795708|emb|CBL43907.1| Isoleucyl-tRNA synthetase [gamma proteobacterium HdN1]
          Length = 937

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +G+KMSKS GN ++  ++        ++  A VIRL +
Sbjct: 580 AVAMRGEAPYKAVLTHGFTVDQQGKKMSKSLGNVVSPQDV-------AKALGADVIRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T YR  +  + + L        +   T+ 
Sbjct: 633 AATDYRAEMTVSDEILKRTADSYRRIRNTAR 663


>gi|126440306|ref|YP_001060426.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|167817415|ref|ZP_02449095.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167825822|ref|ZP_02457293.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|167847306|ref|ZP_02472814.1| leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167895893|ref|ZP_02483295.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|167912541|ref|ZP_02499632.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|167920495|ref|ZP_02507586.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|226196835|ref|ZP_03792414.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|166230619|sp|A3NDK5|SYL_BURP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126219799|gb|ABN83305.1| leucine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|225931095|gb|EEH27103.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 864

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 46/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T +N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGVPPAQWTYENIAYMKKQMQSMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGVAYKKTGTVNWD 159


>gi|290962099|ref|YP_003493281.1| hypothetical protein SCAB_77831 [Streptomyces scabiei 87.22]
 gi|260651625|emb|CBG74749.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 272

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 50/155 (32%), Gaps = 25/155 (16%)

Query: 270 FLNLEGRKMSKSNGNFITINELLETK---------------KFGGRSWPAPVIRLAMLMT 314
            + + G       G        +E                 + G        +RLA+L  
Sbjct: 113 HVTVAGEPAGPGTGPRTDAGIAIEAGPVTEAGPVTWTGPVTRTGEPPASGTALRLALLSH 172

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSALYNDLNTVSAI 365
             R P+      + EAE  L  W  +  +            +  A+  A  +DL+  + +
Sbjct: 173 PRRTPVTLDATAVREAEDTLGHWRGSVAAWAARPSRPVPEPVRQALREAWDDDLDVRAVL 232

Query: 366 QALHKLARE-STKNHDLLPIFNASAHILGIEVCKE 399
             L  + R+    +      +  +  +LG+E+ +E
Sbjct: 233 DVLRDVERDPDVPDGARFETYAYADRLLGLELTRE 267


>gi|323342891|ref|ZP_08083123.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464003|gb|EFY09197.1| isoleucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 906

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 7/111 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D++  G D       + +  S           +  H   ++ +G KMSKS GN ++  
Sbjct: 545 PVDVYAEGSDQYRGWFNSSLIISVALYGFAPYKQVVSHGFIMHDDGEKMSKSKGNALSPQ 604

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            + ET         A ++RL +    Y   I  +   L +      K   T
Sbjct: 605 AITETLG-------ADILRLWVASVDYHSDIKMSQDLLKQVSESYRKIRNT 648


>gi|124360700|gb|ABN08689.1| Aminoacyl-tRNA synthetase, class Ia [Medicago truncatula]
          Length = 1102

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    I               +  NGFL L   KMSKS GNF T+ 
Sbjct: 676 PFDLRVSGKDLLQNHLTFCIYNHTAIWSKRHWPRGFRCNGFLLLNKEKMSKSTGNFRTLR 735

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   R A+
Sbjct: 736 QAIE-------EFSADATRFAL 750


>gi|73669547|ref|YP_305562.1| leucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121729473|sp|Q46AW0|SYL_METBF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72396709|gb|AAZ70982.1| leucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 966

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 14/133 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         +K       NGF++LEG+KMSKS G  +T+ 
Sbjct: 585 PVDLRSSGKDLVPNHLLFFLFHHVALFEEDKWPKALAVNGFVSLEGQKMSKSKGPILTME 644

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
             +         + A + R+ +L T    +  D+    +  A   + ++   S +KG+I+
Sbjct: 645 SAVS-------KYGADITRMYILSTAEQTQDADWQRTGIESARRQVDRFY--SFAKGVIE 695

Query: 349 PAVLSALYNDLNT 361
               +    DL+T
Sbjct: 696 SGKRA----DLST 704


>gi|293391734|ref|ZP_06636068.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952268|gb|EFE02387.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 940

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN +T  E+++        +   ++RL +
Sbjct: 577 STATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNVVTPQEVMD-------KFGGDILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  A     +   T+ 
Sbjct: 630 ASTDYTGEMTVSDEILKRAADSYRRIRNTAR 660


>gi|261868577|ref|YP_003256499.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413909|gb|ACX83280.1| isoleucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 940

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN +T  E+++        +   ++RL +
Sbjct: 577 STATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNVVTPQEVMD-------KFGGDILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  A     +   T+ 
Sbjct: 630 ASTDYTGEMTVSDEILKRAADSYRRIRNTAR 660


>gi|241958076|ref|XP_002421757.1| cytosolic leucyl-tRNA synthetase, putative [Candida dubliniensis
           CD36]
 gi|223645102|emb|CAX39698.1| cytosolic leucyl-tRNA synthetase, putative [Candida dubliniensis
           CD36]
          Length = 1097

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 25/144 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG L L   KMSKS GNF+T+ 
Sbjct: 684 PLDVRVSGKDLIPNHLTFFIYTHVALFPKRFWPRGVRANGHLLLNNAKMSKSTGNFMTLE 743

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWP-------- 338
           +++E        + A   R+AM      + +   +F       A + L+           
Sbjct: 744 QIIE-------KFGADASRIAMADAG--DTVEDANFDEANANAAILRLTTLKDWCEEEVK 794

Query: 339 -----QTSTSKGIIDPAVLSALYN 357
                +T       D A  + + +
Sbjct: 795 NQDKLRTGDYDSFFDAAFENEMND 818


>gi|167574540|ref|ZP_02367414.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 922

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 40/102 (39%), Gaps = 11/102 (10%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++  ++  T+        A ++RL + 
Sbjct: 579 CAADGRAPFKAILTHGFVVDGSGRKMSKSLGNTVSPQQIAGTRG-------ADILRLWIA 631

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPA 350
            T Y   +  + + L        +   T      +    DPA
Sbjct: 632 STDYAAEMSISDEILDRVAETYRRIRNTVRFLLQNVADFDPA 673


>gi|94676833|ref|YP_588985.1| isoleucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
 gi|122988101|sp|Q1LSS9|SYI_BAUCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|94219983|gb|ABF14142.1| isoleucyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
           (Homalodisca coagulata)]
          Length = 938

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN ++  ++++          A ++RL +
Sbjct: 577 STAIKGKAPYKTVITHGFAVDSNGRKMSKSIGNVVSPQQVVDKLG-------ADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T+Y + +  + + L  +     +   T+ 
Sbjct: 630 ASTNYTDDMTISDEILKRSVDTYRRIRNTAR 660


>gi|307317040|ref|ZP_07596481.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897128|gb|EFN27873.1| arginyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 585

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 62/341 (18%), Positives = 116/341 (34%), Gaps = 73/341 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N      +++ R+        +
Sbjct: 133 PT--GPMHVGHCRGAVVGDALANLLAFAGYDVTKEYYINDAGSQIEVLARSAFLRYRQAL 190

Query: 93  NDAISII-TSKNTQQFV----KDTT-----RLACLAPTHQ-PRATNH-IPQMIYLIQNII 140
            + I+ I        ++    +         L  +      P      I  M+ +I+  +
Sbjct: 191 GEDIAEIPAGLYPGDYLVPVGEALADEYGTSLRIMPEDKWVPLVKERVIDAMMAMIREDL 250

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRV------------PEKYHKKN 187
               A   N+++ F   ++ + G+   R  I++      V            PE++  + 
Sbjct: 251 A---ALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGTLPPPKGQLPEEWEDRE 307

Query: 188 PADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD------IHGGGLD 239
              F    RST +    + P     G   +     A    Y    FD      I+  G D
Sbjct: 308 QTLF----RSTEVGDDIDRPLIKSDGSYTY----FAADVAYFKDKFDRGFHEMIYVLGAD 359

Query: 240 LIFPHHENEIAQSCCADRIE--------KTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
                   E A +               +   ++ +   +     KMSK +G+F+T+ E+
Sbjct: 360 HGGYVKRLE-ALARAISGGTAKLTVLLCQLVKLYRNGEPV-----KMSKRSGDFVTLREV 413

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTE 329
           ++             +R  ML   YR+   P+DF   ++TE
Sbjct: 414 VDEVGRDP-------VRFMML---YRKSSEPLDFDFAKVTE 444


>gi|217031695|ref|ZP_03437199.1| hypothetical protein HPB128_155g8 [Helicobacter pylori B128]
 gi|216946542|gb|EEC25142.1| hypothetical protein HPB128_155g8 [Helicobacter pylori B128]
          Length = 502

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +  +G KM
Sbjct: 212 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKDGAKM 269

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 270 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 322

Query: 338 PQTSTS 343
              + +
Sbjct: 323 YDKANA 328


>gi|114763990|ref|ZP_01443231.1| isoleucyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114543582|gb|EAU46596.1| isoleucyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 996

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 22/182 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 650 QACGTIGRAPYRNVVTHGFTLDEKGNKMSKSLGNTIVPEEVV-------KQYGADILRLW 702

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSA-- 364
           +  T Y        + L        +   T      + G    A   A  +D+       
Sbjct: 703 VAQTDYTADQRIGPEILKGVADSYRRLRNTMRFMLGALGHFSEADRVA-ADDM--PELER 759

Query: 365 -----IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLI 418
                +  L    +E  +++D   +F +      +++   + +        +   + R  
Sbjct: 760 WVLHRLAELDAKVQEGYRSYDFQSVFQSVFTFCTVDLSAFYFDIRKDALYCDGDTERRRA 819

Query: 419 LL 420
             
Sbjct: 820 AR 821


>gi|57237973|ref|YP_179222.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|73621970|sp|Q5HU13|SYL_CAMJR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57166777|gb|AAW35556.1| leucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058532|gb|ADT72861.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 809

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 752


>gi|86150411|ref|ZP_01068637.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88596594|ref|ZP_01099831.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|218562705|ref|YP_002344484.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|14285781|sp|Q9PNK3|SYL_CAMJE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85839236|gb|EAQ56499.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88191435|gb|EAQ95407.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|112360411|emb|CAL35208.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926320|gb|ADC28672.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315929925|gb|EFV09083.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 809

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 752


>gi|317013358|gb|ADU83966.1| leucyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 806

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 46/126 (36%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +  +G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKDGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              +++
Sbjct: 627 YDKASA 632



 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|242789835|ref|XP_002481443.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218718031|gb|EED17451.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 1124

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRVSGKDLIQNHLTFFLYIHIALFPQEYWPRGVRANGHLLLNGEKMSKSTGNFLTLK 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|20094800|ref|NP_614647.1| leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|32171571|sp|Q8TVM4|SYL_METKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19888009|gb|AAM02577.1| Leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 943

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 44/123 (35%), Gaps = 10/123 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
              DL+  H    I         +K     +  G   LEG+KMS S GN + ++E L+  
Sbjct: 582 SAKDLVTNHLTFFIFHHAALFPEDKWPKGIVVFGMGLLEGQKMSSSKGNVVLLSEALD-- 639

Query: 296 KFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +   V+RL +  +   + +  D+  + +   +  L ++                
Sbjct: 640 -----EYGPDVVRLFLATSAEPW-QDFDWRDEYVRGVQRHLERFETLIRDHADESVEDKD 693

Query: 354 ALY 356
           A+ 
Sbjct: 694 AVD 696



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 30/99 (30%), Gaps = 16/99 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT--------------DIDDK 78
           P      H+G+AR  +V D+  R  R            ++T              D D  
Sbjct: 36  PYPSGSMHVGHARTYLVPDIYARFKRMQGYNVLFPMAFHVTGTPVVGIAERIKEGDEDTI 95

Query: 79  IIERARQEHPSIPIND--AISIITSKNTQQFVKDTTRLA 115
            + R     P   +        I     +++ ++  R+ 
Sbjct: 96  RLYRDLYGVPEEELEKFTEPEAIVEYFAREYEENMKRMG 134


>gi|284161342|ref|YP_003399965.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284011339|gb|ADB57292.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 661

 Score = 51.0 bits (121), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 42/128 (32%), Gaps = 22/128 (17%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  I  DV  R LR     + V ++         I+  A +E  
Sbjct: 5   TCGLPYANGKAHIGHLRTYIPADVYVRYLRLLG--EKVLFICGSDCHGTPIVVNAEKE-- 60

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL-------APTHQPRATNHIPQMIYLIQNIIL 141
                 +   +  +  + F K    L             +  R T  I      ++ ++ 
Sbjct: 61  ----GISPKELVDRYHEHFQKVFKELEVEFDFYGRTDAEYNHRRTQEI------VKTLMD 110

Query: 142 HGHAYEAN 149
            G+ Y   
Sbjct: 111 KGYIYAKE 118


>gi|307106870|gb|EFN55115.1| hypothetical protein CHLNCDRAFT_31569 [Chlorella variabilis]
          Length = 598

 Score = 51.0 bits (121), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 68/359 (18%), Positives = 104/359 (28%), Gaps = 87/359 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A P I  D L R  R           R +T I        +    +     
Sbjct: 72  VNAAPHMGSAYPTIAADALARFQRLQG--------RRVTFITGTDEHGEKIALAAAARGM 123

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A           + +    L         R T+  H   ++ +++ +   G  Y+A+ E 
Sbjct: 124 APKEHCDDVVASYKQLWRDLDIGY-DSFIRTTDARHEALVVSVLERVWQRGDIYKADYEG 182

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK----------------- 195
            +       Y   +    D+     R P    K+    F L K                 
Sbjct: 183 HYCVD-CEEYKDEADMDADKNCPVHRKPCVERKEENYFFALSKYQAQLEELCSSPGTCFV 241

Query: 196 --RSTPMEP-GW-------------ESPWGRGRPG--------WHIECSAMSSHYL--GK 229
              S   E  GW                WG   P         W    +   S  L  G 
Sbjct: 242 QPESRRNEVLGWVKSGVRDFSISRAAVEWGIPIPRDPKQTVYVWFDALNGYLSGLLPEGA 301

Query: 230 VFD--------------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
             D              +H  G D++  H     A    A  +     ++ H GFL  +G
Sbjct: 302 AADASPEALAAAGWPASLHIIGKDILRFHAVYWPAMLLSA-GLPPPDRVYGH-GFLTKDG 359

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-----DFTVQRLTE 329
            KM KS GN +    L+        ++ A  +R   L    RE +     DF+ +R   
Sbjct: 360 LKMGKSLGNVLEPRALVG-------AYGADAVRYYFL----REIVFGQDGDFSEERFRN 407


>gi|307747993|gb|ADN91263.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 809

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 752


>gi|283956488|ref|ZP_06373968.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792208|gb|EFC30997.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 809

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 752


>gi|116073138|ref|ZP_01470400.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. RS9916]
 gi|116068443|gb|EAU74195.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. RS9916]
          Length = 76

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 384 IFNASAHILGIEVCKEH----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           +    A ++G+   ++      N     AI+  +  R      K F+ AD IR +L ++G
Sbjct: 1   MLRELAAVVGLREEQQQPEASGNGADDAAIDAAIAARKAAKVAKNFAEADRIRNELTAQG 60

Query: 440 FILEDYKNPDNGQRMTRWKQ 459
             L D         +T W++
Sbjct: 61  IELIDKPGG-----ITEWRR 75


>gi|45357889|ref|NP_987446.1| methionyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|68565983|sp|Q6M0E5|SYM_METMP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|45047449|emb|CAF29882.1| Methionyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 663

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 38/123 (30%), Gaps = 15/123 (12%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  D+  R L+    E  V +V    +    I   A +E 
Sbjct: 11  YTNGP-----LHLGHARSTYIPADIFTRYLKLKGEE--VIHVGGTDNHGVPITLTAEKEG 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
                      I  +       D   L           ++ HI         +  +G+ Y
Sbjct: 64  VKPI------DIVDRYHNAIKADLDSLNICFDNFGRTHSDIHIETAQEFYSKLKENGYIY 117

Query: 147 EAN 149
           E  
Sbjct: 118 EKE 120


>gi|21672432|ref|NP_660499.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
 gi|25009353|sp|Q8K9Z2|SYI_BUCAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21623043|gb|AAM67710.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
           graminum)]
          Length = 938

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 15/110 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S         + +  H   ++  G+KMSKS GN I+ NE+++T           ++RL 
Sbjct: 578 ISMLVKNQSPYSEVLTHGFVVDKNGQKMSKSIGNTISPNEVVKTLG-------GDILRLW 630

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           +  ++Y   I  + + L  +  +  +   T+          + A  ND N
Sbjct: 631 VASSNYSNDISISNEILKRSSDIYRRIRNTAR--------FMLANINDFN 672


>gi|310828622|ref|YP_003960979.1| leucine--tRNA ligase [Eubacterium limosum KIST612]
 gi|308740356|gb|ADO38016.1| leucine--tRNA ligase [Eubacterium limosum KIST612]
          Length = 803

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 53/151 (35%), Gaps = 26/151 (17%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYR 317
           E      +    L  +G KMSKS GN +  N++++        + A  +R   M +  Y 
Sbjct: 563 EPYKKRTMQGLILGSDGEKMSKSKGNVVNPNDIID-------EYGADTLRTYVMFIGDYE 615

Query: 318 EPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YND-----LNTV 362
           +P  ++      A+  L +     +  T +      + S +        +D      NT 
Sbjct: 616 KPAPWSENGTKGAKRYLDRVWKLQEIVTDETGYSQELESMMHKTIKKVNSDYEEMKFNT- 674

Query: 363 SAIQALHKLARESTKNHDL-LPIFNASAHIL 392
            AI AL  L  E      +    F     +L
Sbjct: 675 -AIAALMTLLNEFNSVGKVTKDEFKTYLQLL 704


>gi|297620242|ref|YP_003708347.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297379219|gb|ADI37374.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 703

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 41/136 (30%), Gaps = 16/136 (11%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+AR   I  DV  R L+    E  V +V    +    I   A +E 
Sbjct: 14  YTNGP-----LHLGHARSTYIPADVYRRFLKLKGEE--VYHVGGTDNHGVPITLTAEKEG 66

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QPRATNHIPQMIYLIQNIILHGHAY 146
                      I  +       D   L        Q  +  HI       + +   G+ Y
Sbjct: 67  VKPI------DIVERYHNAIKADLDTLNVEFDNFGQTHSDVHIETSQEFYRELRKAGYIY 120

Query: 147 EANNEIIFDTSSIPNY 162
           E   E  +       Y
Sbjct: 121 EKEIEQFYC-PKCDKY 135


>gi|258405548|ref|YP_003198290.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797775|gb|ACV68712.1| leucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 831

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 44/200 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E      +  G +  +G KMSKS G
Sbjct: 531 PVDQYIGGIEHAILHLLYARFFTKALRDLGYMDLDEPF-QHLLTQGMVLKDGAKMSKSKG 589

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKW----- 337
           N +  NE+LET       + A   RL  +        +D+  + +  A   L++      
Sbjct: 590 NIVDPNEMLET-------YGADTTRLFTLFAAPPERDLDWNDKAVEGAYRFLARLWRMGQ 642

Query: 338 ------------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
                                         + +    V + +       +AI A+ +L  
Sbjct: 643 DLSGTLPTLPACAPLPAGELSETAAALRRKEHLTVQKVSADMEEKFQFNTAIAAVMELVN 702

Query: 374 ESTKNHDLLPIFNASAHILG 393
           E +   + L       H LG
Sbjct: 703 EISAARESLLASETDRHALG 722



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/178 (15%), Positives = 53/178 (29%), Gaps = 18/178 (10%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +DP   + YV    P      H+G+ R   + DV+ R  R       V +          
Sbjct: 27  VDPDKPKYYVLEMFPYPSGRIHMGHVRVYTIGDVIARFKRMRGYN--VFHPMGWDAFGLP 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIY 134
               A +           +  T  N  +  +   RL       +  AT H      + ++
Sbjct: 85  AENAAIKHGTH------PAKWTYANITEMRQQLQRLGYSLEWQRELATCHPGYYKWEQLF 138

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
            +  +   G  Y     + +           +  +++E        E  HK+    F+
Sbjct: 139 FL-KLYEKGLIYRKKAPVNWCPGCNT---VLANEQVEEGMCWRCDSEVEHKELAQWFV 192


>gi|289522932|ref|ZP_06439786.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289503956|gb|EFD25120.1| isoleucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 927

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ EGRKMSKS GN +   E++         + A ++RL +
Sbjct: 575 SVATRGRAPFEMVLTHGFIVDGEGRKMSKSLGNVVQPQEVIG-------KYGADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T YR  I  +   L        +   T
Sbjct: 628 ASTDYRNDIRISETILRNLVESYRRIRNT 656


>gi|229087291|ref|ZP_04219433.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228695993|gb|EEL48836.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 802

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|238879648|gb|EEQ43286.1| leucyl-tRNA synthetase [Candida albicans WO-1]
          Length = 1097

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 25/144 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG L L   KMSKS GNF+T+ 
Sbjct: 684 PLDVRVSGKDLIPNHLTFFIYTHVALFPKRFWPRGVRANGHLLLNNAKMSKSTGNFMTLE 743

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWP-------- 338
           +++E        + A   R+AM      + +   +F       A + L+           
Sbjct: 744 QIIE-------KFGADASRIAMADAG--DTVEDANFDEANANAAILRLTTLKDWCEEEVK 794

Query: 339 -----QTSTSKGIIDPAVLSALYN 357
                +T       D A  + + +
Sbjct: 795 NQDKLRTGDYDSFFDAAFENEMND 818


>gi|167564099|ref|ZP_02357015.1| leucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
 gi|167571241|ref|ZP_02364115.1| leucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 864

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 45/147 (30%), Gaps = 16/147 (10%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           R   + +      + M    P      H+G+ R   + DV+YR LR       +      
Sbjct: 25  RSKEDTERKKFYCVSML---PYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW-- 79

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
               D     A  E+ ++      +  T  N     K    +  LA       T   P  
Sbjct: 80  ----DAFGMPA--ENAAMANGVPPAQWTYDNIAYMKKQMQSMG-LAIDWSREVTTCKPDY 132

Query: 133 IYLIQ----NIILHGHAYEANNEIIFD 155
               Q     ++  G AY+    + +D
Sbjct: 133 YRWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|86152674|ref|ZP_01070879.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613441|ref|YP_001000769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166231595|sp|A1W078|SYL_CAMJJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|85843559|gb|EAQ60769.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249151|gb|EAQ72112.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 809

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 752


>gi|78484840|ref|YP_390765.1| isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|78363126|gb|ABB41091.1| Isoleucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 943

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +   +       +  H   ++ +G+KMSKS GN +   ++          + A ++RL +
Sbjct: 583 ALATNGEAPYKQVLTHGFTVDKDGKKMSKSKGNVVAPQDI-------ANKYGADILRLWI 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YR  +  + + ++       +   TS 
Sbjct: 636 AAADYRYEMTVSDEIISRTADAYRRIRNTSR 666


>gi|86150800|ref|ZP_01069016.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841970|gb|EAQ59216.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 809

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 752


>gi|20905283|gb|AAM30563.1| Methionyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 749

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 24/128 (18%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  +  D+  R L+     + VT+V         I+  A +   
Sbjct: 50  TCGLPYANGKAHIGHLRTYVPADIYARSLKKEG--REVTFVCGSDTHGTPIVVNAEE--- 104

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATNHIPQMIYLIQNII 140
              +    + +     + F +   +L            P +  R  +       ++  +I
Sbjct: 105 ---LGITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHD-------IVSRLI 154

Query: 141 LHGHAYEA 148
             G+ Y  
Sbjct: 155 EKGYVYPK 162



 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+ + H     A    AD    TA   + +G + +E RK SK+ G  + + E  
Sbjct: 326 VHFIGGDITYHHCIFWPAMLKGADYSVPTAV--VASGMVKIEDRKFSKTRGYVVWVGE-- 381

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
               +    +   ++R  +   T + + ++F+ + L E
Sbjct: 382 ---DYLDHGFHPDLLRYYLASYTSHTKELNFSWRVLQE 416


>gi|328543900|ref|YP_004304009.1| methionyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
 gi|326413644|gb|ADZ70707.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
          Length = 518

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D + R  R     K V ++    +   K+++ A++E        
Sbjct: 16  PNGAPHIGHAYEAIATDAMARFQRLDG--KDVYFLTGTDEHGQKMLQTAKKE------GI 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANN 150
           ++  +  +N+ +F      L C         +PR      ++      +  +G  Y+ + 
Sbjct: 68  SVRELADRNSARFRDMVAALGCTNDDFIRTSEPRHHRSSQEIWR---RMAANGDIYKDSY 124

Query: 151 EIIFDTSSIPNY 162
              +       Y
Sbjct: 125 SGWYSVRDEAYY 136


>gi|161485679|ref|NP_632891.2| methionyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|25009360|sp|Q8PYJ4|SYM_METMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 715

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 24/128 (18%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  +  D+  R L+    E  VT+V         I+  A +   
Sbjct: 16  TCGLPYANGKAHIGHLRTYVPADIYARSLKKEGRE--VTFVCGSDTHGTPIVVNAEE--- 70

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATNHIPQMIYLIQNII 140
              +    + +     + F +   +L            P +  R  +       ++  +I
Sbjct: 71  ---LGITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHD-------IVSRLI 120

Query: 141 LHGHAYEA 148
             G+ Y  
Sbjct: 121 EKGYVYPK 128



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 8/98 (8%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+ + H     A    AD    TA   + +G + +E RK SK+ G  + + E  
Sbjct: 292 VHFIGGDITYHHCIFWPAMLKGADYSVPTAV--VASGMVKIEDRKFSKTRGYVVWVGE-- 347

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
               +    +   ++R  +   T + + ++F+ + L E
Sbjct: 348 ---DYLDHGFHPDLLRYYLASYTSHTKELNFSWRVLQE 382


>gi|300114159|ref|YP_003760734.1| lysyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299540096|gb|ADJ28413.1| lysyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 662

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 98/314 (31%), Gaps = 39/314 (12%)

Query: 34  TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-------- 85
           T     H+G+ R +++ D +YR LR    E    Y  +  D  D +   A          
Sbjct: 42  TPSGRVHVGSLRGVLIHDAIYRALRDKGVEAIYQYGIDDYDPLDGLPADAASSLQAYMGY 101

Query: 86  --EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNII 140
              +   P     + +      +F+     L   A  ++ R    +    Q I  I    
Sbjct: 102 PLCNIPAPAGSKATDLADHYISEFLNIFPELGVEAQVYRMRDIYRSGRFNQAIDAILKKS 161

Query: 141 L---HGHAYEAN----NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
                 +A  ++     +         + G      I    +     ++       D + 
Sbjct: 162 DVVRKIYAEVSHAARPEDWYPFQVICEHCGK-----IGTTAVTAYDGKEVTYHCKTDLVS 216

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           W +    +       GRG+  W +E +A   H  G    I G G D        ++A  C
Sbjct: 217 WAQGCGHQGKVSPFDGRGKLPWKLEWTA-KWHTFG--ITIEGAGKDHCTKGGSRDVAARC 273

Query: 254 --CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                      N  +   F  + G KMS S G  +   E+           P  ++R  +
Sbjct: 274 LKEIFGDSPPLN--VPYEFFLVSGAKMSSSKGVGMAAREI-------AHFLPPEILRFLI 324

Query: 312 LMTHYREPIDFTVQ 325
           + T  +  ++F+  
Sbjct: 325 VRTPPKRTVNFSTD 338


>gi|315928007|gb|EFV07327.1| Leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 284

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 40/240 (16%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 2   SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 60

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL +L      + +++    +  A   + K    + 
Sbjct: 61  NVVDPDEIIE-------KYGADTARLFILFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 113

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 114 NVKKGELVELKQENLNKEEKYARLKVYEALKKSFEVYHQSFAFNTLIAACMEALNALALC 173

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 174 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 227


>gi|308064327|gb|ADO06214.1| leucyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 806

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    +++
Sbjct: 617 EGAHRFIKRLYDKASA 632


>gi|150396377|ref|YP_001326844.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166232845|sp|A6U8M9|SYR_SINMW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|150027892|gb|ABR60009.1| arginyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 585

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 114/337 (33%), Gaps = 65/337 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N      +++ R+        +
Sbjct: 133 PT--GPMHVGHCRGAVVGDALANLLAFSGFDVTKEYYINDAGSQIEVLARSAFLRYRQAL 190

Query: 93  NDAISIITS----------KNTQQFVKDTTRLACLAPTHQ-PRATNH-IPQMIYLIQNII 140
            + I  I +                 +  T L  +      P      I  M+ +I+  +
Sbjct: 191 GEDIGEIPAGLYPGDYLVPAGEALADEYGTSLRIMPEDKWMPLVKERVIDAMMAMIREDL 250

Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRR-KIDEQKMGTRV------------PEKYHKKN 187
               A   N+++ F   ++ + G+   R  I++      V            PE +  + 
Sbjct: 251 A---ALNVNHDVFFSERALHDNGAARIRTAINDLTFKGHVYKGMLPPPKGQLPEDWEDRE 307

Query: 188 PADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFP 243
              F    RST +    + P     G   +     A       + FD  I+  G D    
Sbjct: 308 QTLF----RSTEVGDDIDRPLIKSDGSYTYFAADVAYFKDKFDRGFDEMIYVLGADHGGY 363

Query: 244 HHENEIAQSCCADRIE--------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
               E A +               +   ++ +   +     KMSK +G+F+T+ E+++  
Sbjct: 364 VKRLE-ALARAISGGSAKLTVLLCQLVKLYRNGEPV-----KMSKRSGDFVTLREVVDEV 417

Query: 296 KFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTE 329
                      +R  ML   YR+   P+DF   ++TE
Sbjct: 418 GRDP-------VRFMML---YRKSSEPLDFDFAKVTE 444


>gi|297380718|gb|ADI35605.1| leucyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 806

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    +++
Sbjct: 617 EGAHRFIKRLYDKASA 632


>gi|237747343|ref|ZP_04577823.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378694|gb|EEO28785.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 879

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 40/135 (29%), Gaps = 15/135 (11%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + Y C    Y     H+G+ R   + DV+YR LR       +       D      E A 
Sbjct: 37  KFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW---DAFGMPAENAA 93

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NII 140
             H         +  T  N          +  LA       T   P+     Q     ++
Sbjct: 94  MAH-----GIPPAEWTYSNIAHMKSQMASMG-LAIDWTREMTACKPEYYKWNQWMFLKML 147

Query: 141 LHGHAYEANNEIIFD 155
             G  Y+    + +D
Sbjct: 148 EKGIIYQKTGTVNWD 162


>gi|317182768|dbj|BAJ60552.1| leucyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 806

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    +++
Sbjct: 617 EGAHRFIKRLYDKASA 632



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T KN +   K+   L 
Sbjct: 78  FGMPAENAAIKHGVH------PKTWTYKNIETMQKEFEALG 112


>gi|308062828|gb|ADO04716.1| leucyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 806

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 17/132 (12%)

Query: 221 AMSSHYLGK--VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLN 272
           A   +YL      D + GG++    H       +         +  E    + I  G + 
Sbjct: 509 AFDQNYLKHFMPVDTYIGGIEHAILHLLYARFFTKALRDLGYLNLDEPFKQL-ITQGMVL 567

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAE 331
            +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L  A 
Sbjct: 568 KDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAH 620

Query: 332 ILLSKWPQTSTS 343
             + +    +++
Sbjct: 621 RFIKRLYDKASA 632


>gi|241667174|ref|ZP_04754752.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254875726|ref|ZP_05248436.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254841747|gb|EET20161.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 935

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +  A   +    ++ H   ++  GRKMSKS GN  +  ++  T         A ++RL  
Sbjct: 574 AMSAKGSQPYKEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLG-------ADILRLWT 626

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y+  +  + Q L        +   T+ 
Sbjct: 627 ASTDYKSEMAVSDQILKRTADTYRRLRNTAR 657


>gi|255581103|ref|XP_002531366.1| leucyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529026|gb|EEF31014.1| leucyl-tRNA synthetase, putative [Ricinus communis]
          Length = 1087

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 52/159 (32%), Gaps = 43/159 (27%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I               +  NG + L   KMSKS GNF T+ 
Sbjct: 671 PFDLRVSGKDLIQNHLTFCIYNHTAIMAKHHWPRGFRCNGHIMLNSEKMSKSTGNFRTLR 730

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E                           +F+           +++       G+ D 
Sbjct: 731 QAIE---------------------------EFSADA--------TRFSLADAGDGVDDA 755

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
             +        T +A  A+ +L +E +   ++L   ++ 
Sbjct: 756 NFV------FETANA--AILRLTKELSWMEEVLAAESSL 786


>gi|167618683|ref|ZP_02387314.1| leucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 864

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 45/149 (30%), Gaps = 20/149 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R        D +  + Y      Y     H+G+ R   + DV+YR LR       +    
Sbjct: 25  RSKE-----DANRKKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                 D     A  E+ ++      +  T  N     K    +  LA       T   P
Sbjct: 80  ------DAFGMPA--ENAAMANGAPPAQWTYDNIAYMKKQMQSMG-LAIDWSREVTTCKP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
                 Q     ++  G AY+    + +D
Sbjct: 131 DYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|167626615|ref|YP_001677115.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189082324|sp|B0TZQ5|SYI_FRAP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167596616|gb|ABZ86614.1| isoleucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 935

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +  A   +    ++ H   ++  GRKMSKS GN  +  ++  T         A ++RL  
Sbjct: 574 AMSAKGNQPYKEVFTHGFVVDEHGRKMSKSLGNVTSPQDIYNTLG-------ADILRLWT 626

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y+  +  + Q L        +   T+ 
Sbjct: 627 ASTDYKSEMAVSDQILKRTADTYRRLRNTAR 657


>gi|313678547|ref|YP_004056287.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950479|gb|ADR25074.1| leucine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 779

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 45/119 (37%), Gaps = 15/119 (12%)

Query: 229 KVFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              D + GG++    H           A        E   NI +  G +  +G KMSKS 
Sbjct: 488 NSVDTYIGGIEHAILHLLYARFFTKVMADLNYVSFREPF-NILLTQGMVLKDGAKMSKSK 546

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           GN ++  +LLE        + A  +RL +L      + ++++   +      +++    
Sbjct: 547 GNTVSPTDLLE-------KYGADTVRLFILFAAPPAKELEWSDDSVEGCNRFINRLYNL 598


>gi|299471948|emb|CBN79628.1| Methionyl-tRNA synthetase [Ectocarpus siliculosus]
          Length = 613

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 61/336 (18%), Positives = 111/336 (33%), Gaps = 80/336 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R +R    E     V  +T  D+      + E  ++  + 
Sbjct: 85  VNDKPHIGHAYTTLACDVIARFMRLDGRE-----VMFLTGTDEH---GQKVEASALKADK 136

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEI 152
           +      + +Q+F +D  +    +     R   T+H      L   +   G         
Sbjct: 137 SPQQFCDEVSQEF-RDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAG 195

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST---------PMEPG 203
            +       YG     ++ + K  +    ++ +K P+ F  +K S             P 
Sbjct: 196 WYSVRDEAFYGE---AELVDGKAPSGAEVEWVEKEPSYF--FKLSEWQQPLLDFYAENPQ 250

Query: 204 WESP--------------------------WGRGRPG--------WHIEC----SAMSSH 225
           + +P                          WG   PG        W        SA+   
Sbjct: 251 FIAPESRRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFP 310

Query: 226 YLGK--------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
            +G+          D+H  G D++  H     A    A  +E    +++H G+   +G+K
Sbjct: 311 EMGEAGEFSKFWPADLHVIGKDILRFHSVYWPALLLAA-GLEPPKRLFVH-GWWTKDGQK 368

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           +SKS GN I   +L+         +     R  ++ 
Sbjct: 369 ISKSTGNVIDPLDLVAR-------YGVDATRYFLMS 397


>gi|224129452|ref|XP_002328720.1| predicted protein [Populus trichocarpa]
 gi|222839018|gb|EEE77369.1| predicted protein [Populus trichocarpa]
          Length = 1087

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I               +  NG + L   KMSKS GNF T+ 
Sbjct: 669 PFDLRVSGKDLIQNHLTFCIFNHTAIMAKHHWPRGFRCNGHIMLNSEKMSKSTGNFRTLR 728

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   R ++
Sbjct: 729 QAIE-------EFSADATRFSL 743


>gi|298712913|emb|CBJ33425.1| Isoleucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 1060

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 6/146 (4%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A +   L    D++  G D      ++ +  S  A+       +  H   L+ +G KMS
Sbjct: 626 VAKAREELDYPADLYLEGSDQHRGWFQSSLLTSVAANGHAPYKTVLTHGFVLDEKGYKMS 685

Query: 280 KSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +   E++E      +   + A V+RL +    Y   +    Q + +A     K 
Sbjct: 686 KSLGNTLDPTEVIEGGNNKKQKPAYGADVLRLWVSSVDYSGDVCVGDQIIKQASESYRKL 745

Query: 338 PQT----STSKGIIDPAVLSALYNDL 359
             T    + S    DP   S  Y DL
Sbjct: 746 RNTLRYLTGSLFDFDPEKDSVPYEDL 771


>gi|332796835|ref|YP_004458335.1| leucyl-tRNA synthetase [Acidianus hospitalis W1]
 gi|332694570|gb|AEE94037.1| leucyl-tRNA synthetase [Acidianus hospitalis W1]
          Length = 881

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 52/166 (31%), Gaps = 17/166 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG +  EG+KMSKS  N I + 
Sbjct: 513 PLDMRHSGSDLIPNHLSFFIYNHAAIFPENLWPKGIAVNGLVLYEGKKMSKSLRNIIPLR 572

Query: 290 ELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +       R +   VIR+ +          +FT          L K+    T+   +D
Sbjct: 573 KAI-------RIYSPDVIRITLAATADMGSETNFTETVAKSVTDNLKKFYDMITTIKGLD 625

Query: 349 PAVLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHIL 392
                             +  L+   +E T   D +    A   IL
Sbjct: 626 SKE-------FGVPEKWMLSRLYSTIKEVTPMMDEMRFREALNEIL 664


>gi|317178266|dbj|BAJ56055.1| leucyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 806

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    +++
Sbjct: 617 EGAHRFIKRLYDKASA 632



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNFPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFETLG 112


>gi|317154515|ref|YP_004122563.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316944766|gb|ADU63817.1| leucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 833

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 64/191 (33%), Gaps = 52/191 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H       +            E  AN+ +  G +  +G KMSKS GN 
Sbjct: 539 DQYIGGIEHAILHLLYSRFFTKALRDTGFVQASEPFANL-LTQGMVLKDGGKMSKSKGNV 597

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEILLSKW---- 337
           +  N ++E        + A   RL +L      P    ++++ Q +  A   LS+     
Sbjct: 598 VDPNSMIER-------YGADATRLFILFA---SPPIKELEWSDQGIEGAFRFLSRLWRLV 647

Query: 338 PQTSTSKGIIDPAVLSALYND-------------------------LNTVSAIQALHKLA 372
            +       + P   +A  +D                          NT  AI A+ +L 
Sbjct: 648 EELEDRLHAVRPTSHAAPKSDAARQLRFKEHDTVRRVTRDIENEFQFNT--AIAAVMELV 705

Query: 373 RESTKNHDLLP 383
            E     D L 
Sbjct: 706 NEMYALKDELA 716



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 51/172 (29%), Gaps = 20/172 (11%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +DPS  + YV    P      H+G+ R   + DV+ R          V +          
Sbjct: 29  VDPSRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKSMQGFN--VLHPMGWDAFGLP 86

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
               A +           +  T +N  +  +   RL       +  A+    +       
Sbjct: 87  AENAAIKHGVH------PAAWTYQNIAEMREQLQRLGYSYDWRREIASCRPEYYKWEQKF 140

Query: 136 IQNIILHGHAYEAN--NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
               +  G AY  +       D +++      +  ++++ K      E   K
Sbjct: 141 FLKFLEKGLAYRKHSPQNWCPDCNTV-----LANEQVEDGKCWRCDSEVEQK 187


>gi|188528338|ref|YP_001911025.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144578|gb|ACD48995.1| leucyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 806

 Score = 50.6 bits (120), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    +++
Sbjct: 617 EGAHRFIKRLYDKASA 632


>gi|49481694|ref|YP_038784.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|60390705|sp|Q6HCE2|SYL_BACHK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49333250|gb|AAT63896.1| leucine--tRNA ligase (leucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|308185334|ref|YP_003929467.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308061254|gb|ADO03150.1| leucyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 806

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +  +G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKDGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|255321491|ref|ZP_05362649.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255301347|gb|EET80606.1| leucyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 823

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 62/192 (32%), Gaps = 45/192 (23%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G +  +G+KMSKS GN +  ++++         + A   RL +L     +
Sbjct: 574 EPFERL-LTQGMVLKDGKKMSKSKGNVVDPDDII-------HKYGADTARLFILFAAPPQ 625

Query: 318 EPIDFTVQRLTEAEILLSKWPQ------------------TSTSKGIIDPAVLSAL--YN 357
           + +++    +  A   L++  +                   S  K      V  AL   N
Sbjct: 626 KELEWNDSAVEGAFRFLNRLYERSSGVKRCMQIPQIAHANLSKEKKYARMKVYEALKKSN 685

Query: 358 D-------LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
           D        NT+  I A  +         +      A   IL +        + I   + 
Sbjct: 686 DVYEENFTFNTL--IAACMEALNAVNAQDNQDVTTEAFFIILNLL-------EPIVPHVA 736

Query: 411 KLVQERLILLKM 422
             + ERL     
Sbjct: 737 NELSERLFSRAN 748



 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 46/171 (26%), Gaps = 33/171 (19%)

Query: 17  EFQAID----PSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           EF+  D    P    + M+   P      H+G+ R   + D L R  R +     V +  
Sbjct: 25  EFEPKDDYSLPKKYILSMF---PYPSGRIHMGHVRNYTIGDALARYYRKHGYN--VLHPI 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC------LAPTHQPR 124
                       A +            I T +N      +   L           T  P 
Sbjct: 80  GFDSFGMPAENAAIKHKIH------PKIWTYENIDYMRGELETLGLSFSKKREFATSDPL 133

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS--FSRRKIDEQ 173
            T    +  + I  +   G  Y           +   Y     +  ++++ 
Sbjct: 134 YTKF--EQEFFI-KMYEKGLVYRK-----SAVVNWCEYDQTVLANEQVEDG 176


>gi|237736433|ref|ZP_04566914.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229421475|gb|EEO36522.1| isoleucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 933

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 60/147 (40%), Gaps = 15/147 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +        I  H GF+N  EG+KMSKS GN +   +++       + + A ++RL 
Sbjct: 578 SIGSTHDAPYKKILTH-GFVNDGEGKKMSKSVGNVVVPADVI-------KVYGADILRLW 629

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--A 364
                YRE +  +   L +      +   T+     +    +PA     Y DL  +   A
Sbjct: 630 CASVDYREDVKISDNILKQMAEAYRRVRNTARYILGNSNDFNPATDKVAYKDLMEIDKWA 689

Query: 365 IQALHKLARESTKNHDLLPIFNASAHI 391
           +  L  L R  T+N++    +N    I
Sbjct: 690 LNKLEILKRRVTENYEKYEFYNLFQDI 716


>gi|229093847|ref|ZP_04224941.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228689526|gb|EEL43337.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|196040876|ref|ZP_03108174.1| leucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196028330|gb|EDX66939.1| leucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|30264808|ref|NP_847185.1| leucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530293|ref|YP_021642.1| leucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187628|ref|YP_030881.1| leucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|52140764|ref|YP_086065.1| leucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|65322109|ref|ZP_00395068.1| COG0495: Leucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|118479871|ref|YP_897022.1| leucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|165869770|ref|ZP_02214428.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167633827|ref|ZP_02392150.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167638006|ref|ZP_02396284.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170686005|ref|ZP_02877228.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170705342|ref|ZP_02895806.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177651275|ref|ZP_02934106.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190568330|ref|ZP_03021238.1| leucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|196033128|ref|ZP_03100541.1| leucyl-tRNA synthetase [Bacillus cereus W]
 gi|196044043|ref|ZP_03111280.1| leucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218905973|ref|YP_002453807.1| leucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225866730|ref|YP_002752108.1| leucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|227817533|ref|YP_002817542.1| leucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|228917393|ref|ZP_04080944.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228929795|ref|ZP_04092811.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228936052|ref|ZP_04098861.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948491|ref|ZP_04110772.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229124310|ref|ZP_04253500.1| Leucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|229186998|ref|ZP_04314149.1| Leucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|229600203|ref|YP_002869016.1| leucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254687549|ref|ZP_05151405.1| leucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725114|ref|ZP_05186897.1| leucyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736852|ref|ZP_05194558.1| leucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741887|ref|ZP_05199574.1| leucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254754515|ref|ZP_05206550.1| leucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757348|ref|ZP_05209375.1| leucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|33301675|sp|Q81KK6|SYL_BACAN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|60390677|sp|Q632V2|SYL_BACCZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230609|sp|A0RJX2|SYL_BACAH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226731224|sp|B7JT07|SYL_BACC0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782481|sp|C3PBK0|SYL_BACAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782482|sp|C3LAX2|SYL_BACAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782483|sp|C1EW09|SYL_BACC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30259483|gb|AAP28671.1| leucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505441|gb|AAT34117.1| leucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181555|gb|AAT56931.1| leucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|51974233|gb|AAU15783.1| leucine--tRNA ligase (leucyl-tRNA synthetase) [Bacillus cereus
           E33L]
 gi|118419096|gb|ABK87515.1| leucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|164714599|gb|EDR20118.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167513823|gb|EDR89191.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167530628|gb|EDR93330.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170129467|gb|EDS98330.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670469|gb|EDT21209.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172083101|gb|EDT68163.1| leucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560586|gb|EDV14563.1| leucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|195994557|gb|EDX58512.1| leucyl-tRNA synthetase [Bacillus cereus W]
 gi|196025379|gb|EDX64049.1| leucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|218537193|gb|ACK89591.1| leucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|225787736|gb|ACO27953.1| leucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|227003674|gb|ACP13417.1| leucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228596450|gb|EEK54119.1| Leucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228659133|gb|EEL14783.1| Leucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228811171|gb|EEM57511.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228823599|gb|EEM69422.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228829852|gb|EEM75473.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842235|gb|EEM87332.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229264611|gb|ACQ46248.1| leucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|261838834|gb|ACX98600.1| leucyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 806

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +  +G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKDGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGVH------PKTWTYENIEAMQKEFEALG 112


>gi|229158352|ref|ZP_04286417.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625099|gb|EEK81861.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|220903664|ref|YP_002478976.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|254782389|sp|B8J3R3|SYI_DESDA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219867963|gb|ACL48298.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 938

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +  H   ++ +GRKMSKS GN I
Sbjct: 557 LGFPADLYLEGSDQHRGWFHSSLLVSEGTRGCAPYRAVLTHGYVVDGDGRKMSKSVGNVI 616

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
              EL+E        + A ++RL +    YRE I  + + L        +   T
Sbjct: 617 APQELIE-------KFGAEIVRLWVSSVEYREDIRLSDEILGRLVDAYRRIRNT 663


>gi|332159288|ref|YP_004424567.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034751|gb|AEC52563.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 967

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D    G DLI  H    I       R E        NGF  LEG+KMSKS GN +   
Sbjct: 603 PLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPRGIAVNGFGTLEGQKMSKSKGNVLNFI 662

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++    +    D+  + + +    L ++ +  T     +
Sbjct: 663 DAIEENG-------ADVVRLYIMSLAEHDSDFDWRRKEVGKLRRQLERFYELITQFAEYE 715



 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P +    H+G+AR   + DV+ R  R            +IT
Sbjct: 43 PYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHIT 83


>gi|229135583|ref|ZP_04264363.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228647856|gb|EEL03911.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|229169475|ref|ZP_04297180.1| Leucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228613974|gb|EEK71094.1| Leucyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|229062425|ref|ZP_04199741.1| Leucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228716896|gb|EEL68583.1| Leucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|77165740|ref|YP_344265.1| isoleucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254433992|ref|ZP_05047500.1| isoleucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123730629|sp|Q3J8W1|SYI_NITOC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76884054|gb|ABA58735.1| Isoleucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207090325|gb|EDZ67596.1| isoleucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 940

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   LG   D++  G D      ++ +  S           +  H   ++ +G+KM
Sbjct: 547 CVLETREELGVPADLYLEGSDQHRGWFQSSLLTSVAIRGTAPYRMVLTHGFTVDAKGKKM 606

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++ +         A ++RL +  T YR  ++ + + L        +  
Sbjct: 607 SKSQGNVVAPQQVMGSLG-------ADILRLWVAATDYRGEMNVSDEILKRIADSYRRMR 659

Query: 339 QTST 342
            T+ 
Sbjct: 660 NTAR 663


>gi|229013948|ref|ZP_04171073.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|228747321|gb|EEL97199.1| Leucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QENGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|163942470|ref|YP_001647354.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229559883|sp|A9VLA2|SYL_BACWK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|163864667|gb|ABY45726.1| leucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 802

 Score = 50.6 bits (120), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QENGELSEKITDAPNKDLE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|317010237|gb|ADU80817.1| leucyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 806

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    + +
Sbjct: 617 EGAHRFIKRLYDKANA 632



 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 32/101 (31%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + DVL R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDVLARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIENMQKEFEALG 112


>gi|297617834|ref|YP_003702993.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145671|gb|ADI02428.1| leucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 825

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/220 (16%), Positives = 77/220 (35%), Gaps = 48/220 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 530 PVDQYIGGVEHAILHLMYSRFFTKVLYDLGLVSCEEPFTNL-LTQGMVLKDGAKMSKSKG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK------ 336
           N ++  +++ T       + A   RL +L  +   + ++++ Q +      L++      
Sbjct: 589 NTVSPEDIINT-------YGADTARLFILFASPPEKDLEWSDQGVEGCYRFLNRVWRLVA 641

Query: 337 ----------WPQTSTSKGIIDPAV-------LSALYND----LNTVSAIQALHKLARE- 374
                          ++    D  +       +  +  D     N  +AI A+ +L    
Sbjct: 642 EYSNQVRGVEAYGGGSNLSAADRELRYRTHFTIKKVTEDIEKRFNFNTAISAIMELVNAL 701

Query: 375 ----STKNHDLLPIFNAS-AHILGIEVCKEHLNKNISIAI 409
                 ++ +L  +  A  A +L +     H+ + +  AI
Sbjct: 702 YQYKDNEHQNLAVVKEALKALVLVLSPFSPHIAEELWEAI 741



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 35/124 (28%), Gaps = 13/124 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R          V +              A +       
Sbjct: 42  PYPSGNLHMGHVRNYAIGDVVARFKTMNGYN--VLHPMGWDAFGLPAENAAIKHGIH--- 96

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               SI T  N +   +    L       +  AT   P+     Q     +  +G AY+ 
Sbjct: 97  ---PSIWTDSNIENMKRQLKSLGISYDWTREFATCK-PEYYRFTQWLFLKLYENGLAYKK 152

Query: 149 NNEI 152
              +
Sbjct: 153 KAAV 156


>gi|57242161|ref|ZP_00370101.1| isoleucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017353|gb|EAL54134.1| isoleucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 916

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 56/147 (38%), Gaps = 14/147 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ +G+KMSKS GN I          +  +++   ++RL +
Sbjct: 585 SVALRGCAPYKNVLTHGFTIDEKGQKMSKSKGNTI-------APDYVAKTYGVEILRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN-DLNTVSAIQA--- 367
            ++ Y   +  +   L +      K   T     + +   L  + + D + +        
Sbjct: 638 FLSDYSTDLKISENILKQVSEQYRKIRNTIRFL-LANINDLDNMQDADFSFIDKWILTRA 696

Query: 368 --LHKLARESTKNHDLLPIFNASAHIL 392
             + K + E+  N++    FNA  + L
Sbjct: 697 NRVFKTSEEAFLNYEFAKGFNALLNFL 723


>gi|298737166|ref|YP_003729696.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
 gi|298356360|emb|CBI67232.1| leucyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 806

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +  +G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKDGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|315635950|ref|ZP_07891211.1| isoleucine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479734|gb|EFU70406.1| isoleucine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 914

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 74/175 (42%), Gaps = 30/175 (17%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN +  ++++       + + + ++RL + M+ Y+  +  +   
Sbjct: 595 HGFTVDEKGEKMSKSKGNVVAPDKVI-------KEYGSEILRLWVAMSDYQSDLKISDNI 647

Query: 327 LTEAEILLSKWPQTS----------------TSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           L +   L  K   T+                +  G +D  +L+      + + A   +++
Sbjct: 648 LKQNGELYRKIRNTARFLLANIDDLEEIIDVSKMGPLDKWILNKAKKVFDEIEAAFNVYE 707

Query: 371 LARESTKNHDLLPIFNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMK 423
            ++   K ++ L +      + GI  +VCK+ L  +    I +L  +  + L  K
Sbjct: 708 FSKGLNKLNNFLVV-----DLSGIYLDVCKDRLYCDDKKDIHRLASQSAMALIAK 757


>gi|307638226|gb|ADN80676.1| Leucyl-tRNA synthetase [Helicobacter pylori 908]
          Length = 806

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    + +
Sbjct: 617 EGAHRFIKRLYDKANA 632



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|256005887|ref|ZP_05430834.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|255990156|gb|EEU00291.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316940919|gb|ADU74953.1| valyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 884

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 42/240 (17%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E       Y     D+   G D+IF      I  +      E    ++IH    + 
Sbjct: 466 GWPDE--TEDLKYF-YPTDVLVTGYDIIFFWVARMIFSALEHTGKEPFKYVFIHGIVRDA 522

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEI 332
            GRKMSKS GN I   E+++        +    +R A+ + T     + F+ ++   +  
Sbjct: 523 LGRKMSKSLGNGIDPLEIID-------KYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 575

Query: 333 LLSKWPQTSTSKGIIDPAVLSALY------NDLNTVSA--IQALHKLARESTKNHDLLPI 384
             +K    S     +       L       N   T     +  ++ L RE T+N +    
Sbjct: 576 FANKIWNASR---FVLMNFDDNLDFSKVDPNKFTTSDKWILSRVNNLTREVTENMEKFE- 631

Query: 385 FNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                  LGI + K  E + +       +LV+ RL       +   D  R       ++L
Sbjct: 632 -------LGIALQKIYEFIWEEFCDWYIELVKPRL-------YDKDDETR---LEAQYVL 674


>gi|317014979|gb|ADU82415.1| leucyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 806

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    + +
Sbjct: 617 EGAHRFIKRLYDKANA 632



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|309356403|emb|CAP37273.2| CBR-LARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 1186

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 60/225 (26%), Gaps = 64/225 (28%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DL+  H      N  A     +   K       NG L L   KMSKS GNF
Sbjct: 669 PIDMRASGKDLVGNHLTYLLFNHAAIW--PEDSSKWPKGIRANGHLLLNNEKMSKSTGNF 726

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           +T+ E +E                            F+   +        +        G
Sbjct: 727 MTLEEAIEK---------------------------FSADGM--------RLSLADAGDG 751

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           + D   + A+ +     +AI  L  +     +  +                     ++  
Sbjct: 752 LEDANFVYAMAD-----AAILRLFTMIEWIKEMIEQRGSLRK--------DSSRFADRVF 798

Query: 406 SIAIEKLVQERLILLKMKKFSSA--------DYIRKQLES--KGF 440
           +  +  L++      +   F  A          IR        G 
Sbjct: 799 ANEMNSLIKITEQNYEATNFKEALKTGFFEYQAIRDTYRELCAGI 843


>gi|281417043|ref|ZP_06248063.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281408445|gb|EFB38703.1| valyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 875

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 42/240 (17%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E       Y     D+   G D+IF      I  +      E    ++IH    + 
Sbjct: 457 GWPDE--TEDLKYF-YPTDVLVTGYDIIFFWVARMIFSALEHTGKEPFKYVFIHGIVRDA 513

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEI 332
            GRKMSKS GN I   E+++        +    +R A+ + T     + F+ ++   +  
Sbjct: 514 LGRKMSKSLGNGIDPLEIID-------KYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 566

Query: 333 LLSKWPQTSTSKGIIDPAVLSALY------NDLNTVSA--IQALHKLARESTKNHDLLPI 384
             +K    S     +       L       N   T     +  ++ L RE T+N +    
Sbjct: 567 FANKIWNASR---FVLMNFDDNLDFSKVDPNKFTTSDKWILSRVNNLTREVTENMEKFE- 622

Query: 385 FNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                  LGI + K  E + +       +LV+ RL       +   D  R       ++L
Sbjct: 623 -------LGIALQKIYEFIWEEFCDWYIELVKPRL-------YDKDDETR---LEAQYVL 665


>gi|237739145|ref|ZP_04569626.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423745|gb|EEO38792.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 933

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EG+KMSKS GN +  ++++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGKKMSKSLGNTVAPSDVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNIIKQMSEAYRRIRNTAR 664


>gi|108563921|ref|YP_628237.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|123373647|sp|Q1CR59|SYL_HELPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|107837694|gb|ABF85563.1| leucyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 806

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +  +G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKDGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|325996820|gb|ADZ52225.1| Leucyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325998412|gb|ADZ50620.1| Leucyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 806

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    + +
Sbjct: 617 EGAHRFIKRLYDKANA 632



 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|308274791|emb|CBX31390.1| Isoleucyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 942

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 ++  H   ++ +G+KMSKS GN I   ++++        + A ++RL +  + Y
Sbjct: 583 GKAPYKSVLTHGFVVDADGKKMSKSLGNVIAPKKVID-------KYGAEILRLWVSASDY 635

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+ I  +   L +      +   T
Sbjct: 636 RDDIRISDNILKQLSDAYRRIRNT 659


>gi|294783857|ref|ZP_06749179.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294479669|gb|EFG27448.1| isoleucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 933

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EG+KMSKS GN +  ++++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGKKMSKSLGNTVAPSDVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNIIKQMSEAYRRIRNTAR 664


>gi|284052168|ref|ZP_06382378.1| leucyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291570532|dbj|BAI92804.1| leucyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 859

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 15/141 (10%)

Query: 21  IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            DP+  + Y      Y     H+G+ R   + DV+ RL R       V +          
Sbjct: 28  QDPNKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFGLP 85

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ- 137
               A      I         T +N  Q  +   RL   +       T   P+     Q 
Sbjct: 86  AENAA------IDRGIPPQTWTYQNIAQMREQLQRLGF-SIDWDAEVTTCSPEYYRWTQW 138

Query: 138 ---NIILHGHAYEANNEIIFD 155
                   G AY+  + + +D
Sbjct: 139 IFLQFFQAGLAYQKESAVNWD 159


>gi|255722261|ref|XP_002546065.1| leucyl-tRNA synthetase [Candida tropicalis MYA-3404]
 gi|240136554|gb|EER36107.1| leucyl-tRNA synthetase [Candida tropicalis MYA-3404]
          Length = 1096

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 25/144 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG L L   KMSKS GNF+T+ 
Sbjct: 683 PLDVRVSGKDLIPNHLTFFIYTHVALFPKRFWPRGVRANGHLLLNNAKMSKSTGNFMTLE 742

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWP-------- 338
           +++E        + A   R+AM      + +   +F       A + L+           
Sbjct: 743 QIVE-------KFGADASRIAMADAG--DTVEDANFDEANANAAILRLTTLKDWCEEEVG 793

Query: 339 -----QTSTSKGIIDPAVLSALYN 357
                +T       D A  + + +
Sbjct: 794 KQDKLRTGDYDSFFDAAFENEMND 817


>gi|149928079|ref|ZP_01916326.1| isoleucyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823165|gb|EDM82402.1| isoleucyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 931

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 51/142 (35%), Gaps = 25/142 (17%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  + +     +  H   ++ +GRKMSKS GN I   ++ +          A ++RL +
Sbjct: 586 SCMINGVPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQQVSDKMG-------AEILRLWV 638

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
             T Y   +  + + L        +   T          +L+ + +              
Sbjct: 639 ASTDYSGELTISDEILKRVVESYRRIRNTLR-------FLLANISD-----------FDF 680

Query: 372 ARESTKNHDLLPIFNASAHILG 393
           A E+    +L  +   +  +LG
Sbjct: 681 ATEAVPTEELAEVDQYALTLLG 702


>gi|126466399|ref|YP_001041508.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|126015222|gb|ABN70600.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 500

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 13/132 (9%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             HIG+A   +  DVL R  R    E    +     D     ++RA  E   +     + 
Sbjct: 17  PPHIGHAYTTVFADVLARYHRLIGDE---VFFMTGNDEHGLKLQRAA-EKKGVHPKQFVD 72

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--NEII 153
            +     +++ +       ++  +  R T+  H   +   IQ +   G  Y+A+      
Sbjct: 73  EMADVY-KKYWELLD----ISYDYFIRTTDDYHEKVVKTAIQKLYDKGLVYKASYAGWYC 127

Query: 154 FDTSSIPNYGSF 165
            D     + G +
Sbjct: 128 VDCEKFYSPGEY 139


>gi|119476949|ref|ZP_01617230.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449756|gb|EAW30993.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 939

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 42/111 (37%), Gaps = 7/111 (6%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S   +       +  H   ++ EGRKMSKS GN I    +
Sbjct: 560 DIYMEGSDQHRGWFQSSLLTSVAVNGFAPYKQVLTHGFTVDTEGRKMSKSIGNTIAPQTV 619

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           + T         A V+RL +    YR  +  + +          +   T+ 
Sbjct: 620 IGTLG-------ADVLRLWVAAADYRNEMTVSDENFKRTADSYRRIRNTAR 663


>gi|268575114|ref|XP_002642536.1| C. briggsae CBR-LRS-1 protein [Caenorhabditis briggsae]
          Length = 1184

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 60/225 (26%), Gaps = 64/225 (28%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DL+  H      N  A     +   K       NG L L   KMSKS GNF
Sbjct: 669 PIDMRASGKDLVGNHLTYLLFNHAAIW--PEDSSKWPKGIRANGHLLLNNEKMSKSTGNF 726

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           +T+ E +E                            F+   +        +        G
Sbjct: 727 MTLEEAIEK---------------------------FSADGM--------RLSLADAGDG 751

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           + D   + A+ +     +AI  L  +     +  +                     ++  
Sbjct: 752 LEDANFVYAMAD-----AAILRLFTMIEWIKEMIEQRGSLRK--------DSSRFADRVF 798

Query: 406 SIAIEKLVQERLILLKMKKFSSA--------DYIRKQLES--KGF 440
           +  +  L++      +   F  A          IR        G 
Sbjct: 799 ANEMNSLIKITEQNYEATNFKEALKTGFFEYQAIRDTYRELCAGI 843


>gi|125972845|ref|YP_001036755.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|125713070|gb|ABN51562.1| valyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
          Length = 884

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 50/240 (20%), Positives = 83/240 (34%), Gaps = 42/240 (17%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E       Y     D+   G D+IF      I  +      E    ++IH    + 
Sbjct: 466 GWPDE--TEDLKYF-YPTDVLVTGYDIIFFWVARMIFSALEHTGKEPFKYVFIHGIVRDA 522

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEI 332
            GRKMSKS GN I   E+++        +    +R A+ + T     + F+ ++   +  
Sbjct: 523 LGRKMSKSLGNGIDPLEIID-------KYGTDALRFALTIGTSPGNDLRFSEEKAESSRN 575

Query: 333 LLSKWPQTSTSKGIIDPAVLSALY------NDLNTVSA--IQALHKLARESTKNHDLLPI 384
             +K    S     +       L       N   T     +  ++ L RE T+N +    
Sbjct: 576 FANKIWNASR---FVLMNFDDNLDFSKVDPNKFTTSDKWILSRVNNLTREVTENMEKFE- 631

Query: 385 FNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                  LGI + K  E + +       +LV+ RL       +   D  R       ++L
Sbjct: 632 -------LGIALQKIYEFIWEEFCDWYIELVKPRL-------YDKDDETR---LEAQYVL 674


>gi|301166931|emb|CBW26510.1| Lysyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 527

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 73/422 (17%), Positives = 133/422 (31%), Gaps = 80/422 (18%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID-------DKIIERAR 84
           G T     H GN R +I  D + R LR     K V ++ +  D D       +   +   
Sbjct: 35  GITPSGVVHFGNFREVITVDFVARALRDRG--KKVRFIFSWDDYDTFRKVPLNLPKQEEL 92

Query: 85  QEHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQP-------RATNHIPQ 131
           +E+   PI D            + + Q F     ++       QP       RA ++  Q
Sbjct: 93  KEYLFRPIVDTPDPFEEAESYAAHHEQNFEAQLDKVGVE---VQPIYQAKKYRAGDYKEQ 149

Query: 132 MIYLIQNIILHGHA-----YEAN--NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           +   ++  +    A     Y +    +  +  S    Y         E        +  +
Sbjct: 150 IRKALE--MKKDIAGILNEYRSTPYGDEYYPISV---YCEKYLTDETEIIDWDGKNKITY 204

Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
           K    D+         E   E+      P W ++   M   Y  +  D   GG D     
Sbjct: 205 KHKVHDYT-------GEIDLETTDKVKLP-WRVDWP-MRWVY--EGVDFEPGGKDHS--- 250

Query: 245 HENEIAQSCCADRIEKTAN-------IWIHNGFLNLEGR--KMSKSNGNFITINELLETK 295
                +Q       +           +++   F++++G   KMS S GN IT+N++L   
Sbjct: 251 -----SQGGSYTTAKDIVKLYGGEAPVYLQYDFVSIKGAGGKMSSSKGNLITVNDVL--- 302

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
               + +   ++R       Y+  +DF V    +       + +       ++       
Sbjct: 303 ----KVYEPEMVRWIFAS--YKSNVDFAVSFDLDVLKTYEDFDRQERLAFGVEQGNEKK- 355

Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIEKLVQ 414
              +N    +  L  +  E  K     P F    ++L I +   E      +  I+    
Sbjct: 356 ---VNMAKRVYELSSI-GEIPKEMPFQPSFRHLCNVLQINDGNIEKAKSYYASEIKNERD 411

Query: 415 ER 416
           ER
Sbjct: 412 ER 413


>gi|209523609|ref|ZP_03272163.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209496014|gb|EDZ96315.1| leucyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 859

 Score = 50.2 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 42/141 (29%), Gaps = 15/141 (10%)

Query: 21  IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            DP+  + Y      Y     H+G+ R   + DV+ RL R       V +          
Sbjct: 28  QDPNKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFGLP 85

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ- 137
               A      I         T +N  Q  +   RL   +       T   P+     Q 
Sbjct: 86  AENAA------IDRGIPPQTWTYQNIAQMREQLQRLGF-SIDWDAEVTTCSPEYYRWTQW 138

Query: 138 ---NIILHGHAYEANNEIIFD 155
                   G AY+  + + +D
Sbjct: 139 IFLQFFQAGLAYQKESAVNWD 159


>gi|315124642|ref|YP_004066646.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018364|gb|ADT66457.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 530

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFKALNLKAVLNDAFEARALQKIPDYLKNLAANFH 485


>gi|157736772|ref|YP_001489455.1| isoleucyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980052|sp|A8ES62|SYI_ARCB4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157698626|gb|ABV66786.1| isoleucyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 919

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 74/175 (42%), Gaps = 30/175 (17%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN +  ++++       + + + ++RL + M+ Y+  +  +   
Sbjct: 600 HGFTVDEKGEKMSKSKGNVVAPDKVI-------KEYGSEILRLWVAMSDYQSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTS----------------TSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           L +   L  K   T+                +  G +D  +L+      + + A   +++
Sbjct: 653 LKQNGELYRKIRNTARFLLANIDDLEEIIDVSKMGPLDKWILNKAKKVFDEIEAAFNVYE 712

Query: 371 LARESTKNHDLLPIFNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMK 423
            ++   K ++ L +      + GI  +VCK+ L  +    I +L  +  + L  K
Sbjct: 713 FSKGLNKLNNFLVV-----DLSGIYLDVCKDRLYCDDKKDIHRLASQSAMALIAK 762


>gi|90417681|ref|ZP_01225593.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90337353|gb|EAS51004.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 515

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D L R  R    +  V ++    +   K+++ AR++        + + 
Sbjct: 18  PHIGHAYEFIATDALARFKRLDGYD--VFFLTGTDEHGIKMLQSAREQ------GISPAE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+ +F +    L         R +   H+     +   +   G  Y+      +  
Sbjct: 70  LARRNSAEF-EAMAALLGGTNDDFIRTSEDRHVAASQAIWTKMAAAGDVYKDAYSGWYSV 128

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 129 RDEAYYGE 136



 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 63/177 (35%), Gaps = 32/177 (18%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +     ++ H GFL   G KMSKS GN I    L
Sbjct: 255 DLHVIGKDIVRFHTVYWPAFLMSA-GLPVPRRVYAH-GFLFNRGEKMSKSVGNVIDPAAL 312

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE-------------AEILLSKW 337
           ++        +    +R  +L    + +  +++ + +               A+  LS  
Sbjct: 313 VDV-------YGLDRLRYFLLREVPFGQDGNYSHEAIVNRTNSELANDLGNLAQRSLSMV 365

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL---ARESTKNHDLLPIFNASAHI 391
            +   +K     A + A     +T   + A + L    R      +L  +  A   +
Sbjct: 366 GKHCGAKVPTPGAFIEA-----DTAI-LTAANDLLPKVRTMIDRQELHGVLAAIIAV 416


>gi|269928561|ref|YP_003320882.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
 gi|269787918|gb|ACZ40060.1| methionyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
          Length = 525

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/236 (18%), Positives = 79/236 (33%), Gaps = 54/236 (22%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THY 316
            E      + +G+L + G KMSKS GN +   EL          + A  +R  ML+    
Sbjct: 287 GEPLPTTIVVHGYLTVGGEKMSKSLGNVVDPAELTAR-------YGADAVRYWMLLEVPP 339

Query: 317 REPIDFTVQRLT---------EAEILLSKW----------------------PQTSTSKG 345
            +  D+T ++L          +   LL++                               
Sbjct: 340 TQDADYTDEKLERRYNADLANDLGNLLNRTVSMIRRYRAGLVPAPGEPVTTDQDLEAVAA 399

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-HDLLPIFNASAHILGIEVCKEHLNKN 404
            +  A+  A+  + +  +A+ A+  L   + +   +  P   A A   G       L+  
Sbjct: 400 NLPGAIAEAMGQNFDPQTALAAIWDLVVRANRYVEETAPWSLARAERSGDAAATARLDTA 459

Query: 405 ISIAIEKLVQERLILLKMKKF--SSADYIRKQLESK-GFILEDYKNPDNGQRMTRW 457
           +    E L   R+I   ++ F   +A    K++  + G  LE      +      W
Sbjct: 460 LYHLAEAL---RIIAQALRPFLPDTA----KRIAEQIGVALE----TPSWPAALTW 504



 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 34/109 (31%), Gaps = 10/109 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P V    H+G+A   ++ D   R  R         ++   TD +      A         
Sbjct: 16  PYVNAAPHLGHALEYVLADAFARYHRLTG--DDTRFLTG-TDENSLTNVLAA-----ERE 67

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
              ++ +  +N + F + T  L          A    P+ I   Q +  
Sbjct: 68  GIPVADLVDRNAEAFRRLTEYLDISNDDFIRTAAE--PRHIEGAQKLWE 114


>gi|149246444|ref|XP_001527686.1| leucyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
 gi|146447640|gb|EDK42028.1| leucyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
          Length = 1100

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 48/143 (33%), Gaps = 24/143 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG L L   KM+KS GNF+T+ 
Sbjct: 689 PLDVRVSGKDLIPNHLTFFIYTHVALFPKRLWPKGVRANGHLMLNNAKMAKSTGNFMTLE 748

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWP-------- 338
           +++E        + A   R+AM      + +   +F       A + L+           
Sbjct: 749 QIVE-------KFGADASRIAMADAG--DTVEDANFDEANANAAILRLTTLKDWCEEELK 799

Query: 339 ----QTSTSKGIIDPAVLSALYN 357
               +T       D A  + + +
Sbjct: 800 NQNLRTGEYDSFFDEAFENEMND 822


>gi|328954555|ref|YP_004371889.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
 gi|328454879|gb|AEB10708.1| Isoleucyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
          Length = 933

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I   +++       + + A ++RL +
Sbjct: 578 AVATRGQAPYRRVLTHGFAVDGEGKKMSKSLGNIIAPQDVI-------QEYGAEILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YR+ +  + Q L +      +   T+ 
Sbjct: 631 SAEDYRDEVRLSDQILKQLTEAYRRLRNTAR 661


>gi|170099223|ref|XP_001880830.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164644355|gb|EDR08605.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 1097

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI     DL+  H    +         +K       NG L L G+KMSKS GN +T+ 
Sbjct: 683 PFDIRSSAKDLVPNHLTFALYNHAALFPEDKWPLSMRTNGHLMLNGKKMSKSTGNSLTLR 742

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           E +E        + A   RL++
Sbjct: 743 EAIE-------KFGADATRLSL 757


>gi|167520842|ref|XP_001744760.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777091|gb|EDQ90709.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1047

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 63/197 (31%), Gaps = 27/197 (13%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
                D+   G DLI  H    +         E     +  NG L L+G KMSKS GNF+
Sbjct: 657 FWYPMDLRVSGKDLIGNHLTYSLYNHSAIFPREMWPRAFRANGHLLLDGDKMSKSTGNFL 716

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           T+ + ++        +     RL +               + +A   L            
Sbjct: 717 TLYQAIDL-------FGTDATRLCLADAG---------DAIEDANFELKSANAAVLRLYN 760

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN--KN 404
            +  V         T+ A+  L   A ++  +   +   N+   +L  E   E L     
Sbjct: 761 ENEWVAE-------TLRALPELRAGAMDTFFDKVFVNEINSC--VLAAEAAYEKLEFRDA 811

Query: 405 ISIAIEKLVQERLILLK 421
           I+    +L   R    K
Sbjct: 812 ITKGFFQLQLARDRYRK 828


>gi|21219810|ref|NP_625589.1| hypothetical protein SCO1303 [Streptomyces coelicolor A3(2)]
 gi|14575560|emb|CAC42850.1| hypothetical protein SCBAC36F5.14c [Streptomyces coelicolor A3(2)]
          Length = 267

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
               +RLA+L  H+  P++     L EA   L+                  G +   + +
Sbjct: 156 DPDAVRLALLERHHHAPVELDATALDEARATLAGLRGAVADWARQPSRPVPGELRDRLRA 215

Query: 354 ALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGIEVCKE 399
           A  +DL+    ++ L ++A +    +      F  +   LG+ + ++
Sbjct: 216 AWEDDLDAPGVLRVLRRVATDPDLPDGARFETFAYADRFLGLHLTRD 262


>gi|294101952|ref|YP_003553810.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616932|gb|ADE57086.1| isoleucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 926

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S    +     N+  H   ++ EG+KMSKS GN +   E+++        + A ++RL +
Sbjct: 578 SVAIRKKAPYRNVLTHGFIVDGEGKKMSKSLGNVVRPQEVVD-------KYGADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T YR  I  +   +        +   T+ 
Sbjct: 631 ASTDYRNDIRISEGIIKSLTESYRRIRNTAR 661


>gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica]
 gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica]
          Length = 532

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 62/356 (17%), Positives = 123/356 (34%), Gaps = 77/356 (21%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE-RARQ 85
           YV  P  Y     H+G+   M++ DV+ R       +  +     +T ID+  ++ +   
Sbjct: 23  YVTTPIFYPNAEPHVGHLYSMVLADVIKRYNGLNGKDTYL-----LTGIDEHGLKIQTAA 77

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHG 143
           E  ++        +  K  Q        +  +      R T  +H+  +  +   +   G
Sbjct: 78  EKLNLQPKILCDQLAEKFKQ-----LAEVGNIDNNRFMRTTDADHVNTVNDMWDRLTKAG 132

Query: 144 HAYEANNEIIFDTSSIPNY---------GSFSRRK-------IDEQKMGTRVPEKYHK-- 185
           + Y+ ++   +  S    Y         G     +        +E+    R+     K  
Sbjct: 133 YIYKGSHSGYYCVSDETYYPRDKCHEVNGRLVSIETGKEVEWTEEENYFFRLSAMRDKLL 192

Query: 186 ---KNPADFILWKRSTPM---EPGWESP------------WGRGRPG--------WHIEC 219
                  +F++ K        E   + P            WG   PG        W    
Sbjct: 193 EFYNANPEFVMPKEVYRGIVDEVSRDLPDLSISRPTNRLSWGIPVPGDDSQVIYVW---L 249

Query: 220 SAMSSHYLGKVFD-----IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
            A+ ++   + FD     +H  G D+   H     A    A  I+   ++ +H+ +++ E
Sbjct: 250 DALVNYATAQGFDTVSEAVHIVGKDIQRFHAIYWPAFLLAA-GIKPPKSVLVHSHWIS-E 307

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           G+KMSKS GN +    ++         + +  +R  ++   H  +  DFT  ++ E
Sbjct: 308 GQKMSKSIGNVVDPMHVIS-------KYGSDSVRFLLMCDGHLHKDNDFTETKIAE 356


>gi|116749515|ref|YP_846202.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|166231649|sp|A0LK15|SYL_SYNFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116698579|gb|ABK17767.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 829

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 67/182 (36%), Gaps = 46/182 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                 +  E   N+ +  G +  +G KMSKS G
Sbjct: 532 PVDQYIGGIEHAVLHLLYSRFFVKVLRDMGALEVDEPFRNL-LTQGMVIKDGAKMSKSKG 590

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++       +++ A  +RL  L  +   + ++++ Q +  +   LS+ W   S
Sbjct: 591 NVVDPDDMI-------KAYGADTVRLFCLFASPPEKDLEWSDQGVEGSFRFLSRIWRLVS 643

Query: 342 TSKGIID-----------PAVLSALY-----------ND------LNTVSAIQALHKLAR 373
            +   +            P  L AL+            D       NT  AI A+ +L  
Sbjct: 644 DNLDALRSAPRHNGGGALPEPLEALHRKTHQTIKKVTEDIRDRFHFNT--AIAAIMELVN 701

Query: 374 ES 375
           + 
Sbjct: 702 QI 703



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 15/130 (11%)

Query: 23  PSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P   + Y+    P      H+G+ R   + DV+ R LR       V +            
Sbjct: 30  PGREKFYLLEMFPYPSGRIHMGHVRNYSIGDVVARFLRMRGYN--VLHPMGWDAFGMPAE 87

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYLI 136
             A      I      +  T +N         +L       +  AT  +     + ++ +
Sbjct: 88  NAA------IKAKTHPARWTYENIAYMRSQLKQLGFSYDWSREFATCDVSYYRWEQLFFL 141

Query: 137 QNIILHGHAY 146
             +   G AY
Sbjct: 142 -KMYEKGLAY 150


>gi|189485620|ref|YP_001956561.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287579|dbj|BAG14100.1| isoleucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 929

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 12/145 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ +G+KMSKS GN ++ + L+         + A V+RL +
Sbjct: 591 SVAVKGKSPYKNVLTHGFVVDGQGKKMSKSIGNIVSSDNLIN-------KYGADVVRLWI 643

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSAL-YNDLNTVS--AIQ 366
             + Y+E I  + + +        K   T       I D  +  AL + D+      A+ 
Sbjct: 644 ASSDYKEDIRISDEIIRGLSDTYRKIRNTIRFLLGNIGDFDLKKALPFKDMQETDKYALS 703

Query: 367 ALHKLARESTKNHDLLPIFNASAHI 391
            L +L   S   ++      A+A I
Sbjct: 704 RLQQLISISLAAYESYEFHKAAAAI 728


>gi|153873076|ref|ZP_02001778.1| leucyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152070458|gb|EDN68222.1| leucyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 622

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 43/154 (27%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             E  +++ +  G +  +G KMSKS GN +   +L+         + A  +RL ++    
Sbjct: 364 NDEPFSHL-LTQGMVLKDGSKMSKSKGNTVDPQDLIN-------KYGADTVRLFIMFA-- 413

Query: 317 REP----IDFTVQRLTEAEILLSKW-----------------PQTSTSKGIIDPAVLSAL 355
             P    ++++   +  A   L +                   + +  + ++   V   +
Sbjct: 414 -SPPEQSLEWSDTGVEGAFRFLKRLWKQVMTHLETGAPVLTPDKLTAEEKVLRRQVHETI 472

Query: 356 Y---ND------LNTVSAIQALHKLARESTKNHD 380
               +D       NT  AI A+ +L    ++  D
Sbjct: 473 NKVSDDLGRRYTFNT--AIAAMMELLNHLSRIKD 504


>gi|297170410|gb|ADI21442.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_10G19]
          Length = 803

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 506 PVDIYIGGIEHAILHLLYSRFFHKAMRDMGLVNGDEPFKKL-LTQGMVLKDGTKMSKSKG 564

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +   + ++        + A  IRL M+      + ++++   +  A   L K+
Sbjct: 565 NTVDPQKYID-------HYGADTIRLYMMFTAPPEQSLEWSDSAIEGASRFLKKF 612


>gi|283856343|ref|YP_162578.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|283775340|gb|AAV89467.2| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 574

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 102/342 (29%), Gaps = 73/342 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N      + + R+        +
Sbjct: 133 PT--GPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLARSAYMRYREAL 190

Query: 93  NDAISIITSKNTQQFVKDTTRLACLA-PTHQPRATNH----------IPQMIYLIQNIIL 141
            + I+I        ++    +L           A             +  M+ +I++ + 
Sbjct: 191 GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVAAMMDMIRDDLA 250

Query: 142 ----------HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
                        A      +      +   G   +  ++         E      P + 
Sbjct: 251 LLGIHHDKFTSEAALHKAGIVQKAIDKLEKEGLIYKGVLE-----APKGETPEDWEPVEL 305

Query: 192 ILWKRSTPMEPGWESPWGRGRP---------------GWHIECSAMSSHYLGKVFDI--- 233
            L++ +   +          RP                +H E +A +        DI   
Sbjct: 306 TLFRATKFGDDS-------DRPVQKSDGSYTYFGADLAYHAEKAATADQL----VDIWGA 354

Query: 234 -HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINE 290
            H G +  I      + A +             +    L   G   KMSK +GNF+T+ +
Sbjct: 355 DHAGTVKRI------KAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLAD 408

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
           ++             V+R +ML       +DF  +++ EA  
Sbjct: 409 VVSEVGR-------DVVRFSMLTRKADAQMDFDFEKVIEASK 443


>gi|254780079|ref|YP_003058186.1| leucyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001992|emb|CAX30251.1| Leucine tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Helicobacter pylori B38]
          Length = 808

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +   G KM
Sbjct: 518 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKNGAKM 575

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 576 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 628

Query: 338 PQTSTS 343
              +++
Sbjct: 629 YDKASA 634



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 22  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 79

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 80  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 114


>gi|212709129|ref|ZP_03317257.1| hypothetical protein PROVALCAL_00162 [Providencia alcalifaciens DSM
           30120]
 gi|212688041|gb|EEB47569.1| hypothetical protein PROVALCAL_00162 [Providencia alcalifaciens DSM
           30120]
          Length = 936

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 59/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL +
Sbjct: 576 STSMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQDVMNKLG-------ADILRLWV 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
             T Y   I  + + L  A     +   T+          L A  N  N          +
Sbjct: 629 ASTDYTGEIAVSDEILKRAADSYRRIRNTAR--------FLLANLNGFNPETDMVKPEDM 680

Query: 366 QALHKLA--------RESTKN---HDLLPIFNASAHILGIEVCKEHLN 402
             L + A        +E TK    +D L +     H   IE+   +L+
Sbjct: 681 VVLDRWAVGRALEAQKEITKAYDEYDFLGVIQRLMHFCSIEMGSFYLD 728


>gi|300690442|ref|YP_003751437.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
 gi|299077502|emb|CBJ50128.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum PSI07]
          Length = 877

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCNPDYYKWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTGTVNWD 165


>gi|289772994|ref|ZP_06532372.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289703193|gb|EFD70622.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 265

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
               +RLA+L  H+  P++     L EA   L+                  G +   + +
Sbjct: 154 DPDAVRLALLERHHHAPVELDATALDEARATLAGLRGAVADWARQPSRPVPGELRDRLRA 213

Query: 354 ALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGIEVCKE 399
           A  +DL+    ++ L ++A +    +      F  +   LG+ + ++
Sbjct: 214 AWEDDLDAPGVLRVLRRVATDPDLPDGARFETFAYADRFLGLHLTRD 260


>gi|229918560|ref|YP_002887206.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469989|gb|ACQ71761.1| isoleucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 908

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 11/110 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ +GRKMSKS GN I  N+L+       + + A ++RL +
Sbjct: 567 AVATTGKAPYRNVLSHGFVLDGDGRKMSKSLGNTIAPNDLV-------KQYGAEIVRLWV 619

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYN 357
               Y+  +  +     +   +  K   T      +    +P++  A  +
Sbjct: 620 ASVDYQSDVRASHDNFKQVSEVYRKMRNTIRFLLGNLNGFEPSMRVAFDD 669



 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 10/136 (7%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERA---RQ 85
           GP  Y     H+G+A   ++ D++ R       +  +    +   +  +  +++A   R+
Sbjct: 55  GP-PYANGDIHMGHAMNKVLKDIIVRFKGMNGYQSPMIPGWDTHGLPIENALQKAGVNRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E       +  +    +      +   RL  LA    P  T    +    I L  ++   
Sbjct: 114 EMTVAEFREKCAEYAMEQVNSQREQFKRLGLLADFENPYITLLPEYEAAQIRLFGSMAEK 173

Query: 143 GHAYEANNEIIFDTSS 158
           G+ Y+    + +  SS
Sbjct: 174 GYIYKGKKPVYWSPSS 189


>gi|332975671|gb|EGK12557.1| leucine--tRNA ligase [Desmospora sp. 8437]
          Length = 373

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 43/179 (24%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +           IE  A+ +   G +  +G KMSKS G
Sbjct: 83  PVDFYIGGIEHAVLHLLYSRFFTKVLHDAGMVEAIEPFAHYFP-LGMVLKDGAKMSKSKG 141

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++  E+++        + A   RL +L        +D++   +  +   L++ W    
Sbjct: 142 NVVSPMEIIDR-------YGADTARLFILFAAPPDGELDWSDAGVEGSHRFLNRVWRMVQ 194

Query: 342 TSKGIIDPAVLSAL-------------------YND------LNTVSAIQALHKLARES 375
             K ++    ++ L                    +D       NT  A+ A+ +L    
Sbjct: 195 QHKELVRSQPVAQLEGKEAKELHRVLQQTIKKVSDDVGDRLQFNT--AVSAIMELINAI 251


>gi|256789099|ref|ZP_05527530.1| hypothetical protein SlivT_31838 [Streptomyces lividans TK24]
          Length = 247

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 41/107 (38%), Gaps = 10/107 (9%)

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
               +RLA+L  H+  P++     L EA   L+                  G +   + +
Sbjct: 136 DPDAVRLALLERHHHAPVELDATALDEARATLAGLRGAVADWARQPSRPVPGELRDRLRA 195

Query: 354 ALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGIEVCKE 399
           A  +DL+    ++ L ++A +    +      F  +   LG+ + ++
Sbjct: 196 AWEDDLDAPGVLRVLRRVATDPDLPDGARFETFAYADRFLGLHLTRD 242


>gi|118602372|ref|YP_903587.1| isoleucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166229765|sp|A1AW09|SYI_RUTMC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118567311|gb|ABL02116.1| Isoleucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 922

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +      N+  H   ++  G+KMSKS GN ++  +++           A V+RL +
Sbjct: 568 SVAINGKAPYKNVLTHGFVVDKNGKKMSKSLGNVMSPQKIVNNLG-------ADVLRLWI 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y   +    + L  +     +   T
Sbjct: 621 ASTDYTSEMTVGDEILKRSADSYRRIRNT 649


>gi|169855176|ref|XP_001834257.1| leucine-tRNA ligase [Coprinopsis cinerea okayama7#130]
 gi|116504674|gb|EAU87569.1| leucine-tRNA ligase [Coprinopsis cinerea okayama7#130]
          Length = 1098

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI     DL+  H    +         +K       NG L L G+KMSKS GN +T+ 
Sbjct: 687 PFDIRSSAKDLVPNHLTFALYNHAALFPEDKWPLSMRTNGHLMLNGKKMSKSTGNSLTLR 746

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           E +E        + A   RL++
Sbjct: 747 EAIE-------KFGADATRLSL 761


>gi|217966690|ref|YP_002352196.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217335789|gb|ACK41582.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 634

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 42/181 (23%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A     +         + +GF  ++G K+SKS GN +  +EL
Sbjct: 260 DVHLIGKDILRFHAIIWPAILMALN--IPLPKTVLAHGFWTIKGGKISKSKGNRVDPHEL 317

Query: 292 LETKKFGGRSWPAPVIRLAMLM----------------THYREPID-------------- 321
           +         +    +R  +L                   Y   +               
Sbjct: 318 INL-------YGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLLNRVLTVA 370

Query: 322 --FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
             +T  ++ E +    +          +   V  A+ N  N  +A+  + ++ +E+ +  
Sbjct: 371 EKYTEGKVPEPKEFQEEDKFLLQKGDDMANKVEEAMAN-FNPANALTYIWEVVQEANRYI 429

Query: 380 D 380
           D
Sbjct: 430 D 430


>gi|121608058|ref|YP_995865.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
 gi|166231650|sp|A1WGU0|SYL_VEREI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121552698|gb|ABM56847.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
          Length = 907

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 43/143 (30%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D    + Y C    Y     H+G+ R   + D+L R LR       +          
Sbjct: 26  VTQDAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGW------ 79

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D     A  E+ +I      +  T +N     +    L       +  AT   P      
Sbjct: 80  DAFGLPA--ENAAIKNGMPPARWTRENIAYMKQQMQALGLAIDWSRELAT-CDPGYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLDKGIAYRKTQVVNWD 159


>gi|52425806|ref|YP_088943.1| isoleucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|81825491|sp|Q65RQ2|SYI_MANSM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52307858|gb|AAU38358.1| IleS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 938

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN +T  E+++        +   ++RL +
Sbjct: 584 STATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMD-------KFGGDILRLWV 636

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  A     +   T+ 
Sbjct: 637 ASTDYTGEMTVSDEILKRAADSYRRIRNTAR 667


>gi|300703051|ref|YP_003744653.1| leucyl-tRNA synthetase (leucine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
 gi|299070714|emb|CBJ42009.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum CFBP2957]
          Length = 877

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCDPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTGTVNWD 165


>gi|113869093|ref|YP_727582.1| leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
           [Ralstonia eutropha H16]
 gi|113527869|emb|CAJ94214.1| Leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
           [Ralstonia eutropha H16]
          Length = 1343

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 41/137 (29%), Gaps = 15/137 (10%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + DV+ R LR       +          D     
Sbjct: 508 KPKFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGNNVLMPMGW------DAFGMP 561

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----N 138
           A  E+ ++    A +  T  N     K    +  LA           P      Q     
Sbjct: 562 A--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYRWNQWLFLK 618

Query: 139 IILHGHAYEANNEIIFD 155
           ++  G AY     + +D
Sbjct: 619 MLEKGIAYRKTGTVNWD 635


>gi|262201453|ref|YP_003272661.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
 gi|262084800|gb|ACY20768.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
          Length = 523

 Score = 50.2 bits (119), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 50/157 (31%), Gaps = 24/157 (15%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R    +     VR +T  D   +   + +  +     
Sbjct: 26  PNGAPHIGHAYEYISADVLARFHRLDGYD-----VRFLTGTD---VHGQKMQQTAEKEGI 77

Query: 95  AISIITSKNTQQFVKDTTRLAC-------LAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
             + +  +N+ +F     RL          +     RA+  I       Q +  +G  Y 
Sbjct: 78  PTAELARRNSDRFQALQDRLGSSYHRFIRTSDDDHKRASEAIW------QRMSDNGDIYL 131

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                 +D      Y   S   ++E   G RV     
Sbjct: 132 DKYSGWYDVRDETFYAD-SETSVNE--AGERVATDTG 165



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 40/97 (41%), Gaps = 10/97 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  I+    +++H GFL  +G KMSKS GN +  + L
Sbjct: 269 DLHIIGKDIIRFHCVYWPAFLMSA-GIDLPKRVFVH-GFLLNKGEKMSKSVGNVLDPDAL 326

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           +              +R   L    Y +   ++   +
Sbjct: 327 IAEFGLDP-------VRYFFLREVSYGQDGSYSTDAI 356


>gi|87199956|ref|YP_497213.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87135637|gb|ABD26379.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 521

 Score = 50.2 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 53/168 (31%), Gaps = 24/168 (14%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  DV+ R  R    +     VR  T  D+  ++ A++      +      
Sbjct: 18  PHIGHAYEAIAADVIARFQRAMGRD-----VRFQTGTDEHGLKMAQKAR---ELGITPRE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           ++ + +  F+K    L         R T   H      L + +  +G  Y    E  +  
Sbjct: 70  LSDEMSSYFIKMCDELNVSY-DVFIRTTEERHHASTQELWRRMEANGDLYLDRYEGWYSV 128

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
                Y         E   G    +   +  P D+ +       E  W
Sbjct: 129 RDEAFY------DESELVAGEGGEKLSPQGTPVDWTV-------EESW 163


>gi|210135724|ref|YP_002302163.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133692|gb|ACJ08683.1| leucyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 806

 Score = 50.2 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +   G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKNGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|206900296|ref|YP_002251273.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206739399|gb|ACI18457.1| leucyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 824

 Score = 50.2 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 76/206 (36%), Gaps = 38/206 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    ++   G +  +G+ MSKS G
Sbjct: 540 PVDQYTGGIEHAVLHLLYSRFITKVLYDAGYSPVREPFKRLFT-QGMVYKDGQIMSKSLG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++++ ++E       ++ A   RL +L +      I+++ + +  A   L+++ +   
Sbjct: 599 NIVSVDYMVE-------NYGADTARLFILFVAPPEVDIEWSDEGVEGANRFLNRFWRLVL 651

Query: 343 SKGIIDPAV---------------LSALYND-----LNTV-SAIQALHKLARESTKNHDL 381
               ++P V               +  +  D      NT  +AI  L  L  +  +N   
Sbjct: 652 DDAEVEPKVDEEQEKLIRRKLHKTIKKVTEDIENFKFNTAIAAIMELTNLLFDHKRNFGR 711

Query: 382 LPIFNAS--AHILGIEVCKEHLNKNI 405
            P F  +    IL +     H+ + +
Sbjct: 712 TPAFEEAIKTSILLLSPFVPHITEEL 737



 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 35/122 (28%), Gaps = 17/122 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPSI 90
           P      H+G+ R   + DV+ R             V N    D   +  E A  +H   
Sbjct: 55  PYPSGDLHMGHMRNYTIGDVVARYYTMKGYN-----VLNPMGWDAFGQPAENAAIKHKVH 109

Query: 91  PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAY 146
           P        T KN  +  +   ++  +        T   P      Q     +   G AY
Sbjct: 110 P-----KEWTYKNIARMKEQLFKMGVVY-DWDREVTACAPDYYKWTQWIFLKLYERGLAY 163

Query: 147 EA 148
             
Sbjct: 164 RK 165


>gi|152979533|ref|YP_001345162.1| isoleucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|150841256|gb|ABR75227.1| isoleucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 915

 Score = 50.2 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN +T  E+++        +   ++RL +
Sbjct: 561 STATDNQAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMD-------KFGGDILRLWV 613

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  A     +   T+ 
Sbjct: 614 ASTDYTGEMTVSDEILKRAADSYRRIRNTAR 644


>gi|88858003|ref|ZP_01132645.1| isoleucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88819620|gb|EAR29433.1| isoleucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 942

 Score = 50.2 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   L    D++  G D       + +  S   +       +  H   ++  GRKM
Sbjct: 550 CVVDAREDLVGPADLYLEGSDQHRGWFMSSMMTSVAINGHAPYRQVLTHGFTVDENGRKM 609

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I+  +++           A ++RL +  T Y   +  + +    A     +  
Sbjct: 610 SKSLGNVISPQDVMNKLG-------ADILRLWVASTDYTAEMTVSDEIFNRAADRYRRIR 662

Query: 339 QTST 342
            TS 
Sbjct: 663 NTSR 666


>gi|290474752|ref|YP_003467632.1| isoleucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
 gi|289174065|emb|CBJ80852.1| isoleucine tRNA synthetase [Xenorhabdus bovienii SS-2004]
          Length = 937

 Score = 50.2 bits (119), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   DI+  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 550 EFHGNSADIYLEGSDQHRGWFMSSLMLSTAIKGKAPYRQVLTHGFTVDEQGRKMSKSIGN 609

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            ++  +++           A ++RL +  T Y   I  + + L  +     +   T+ 
Sbjct: 610 TVSPQDVMNKLG-------ADILRLWVASTDYSGEIAVSDEILKRSADAYRRIRNTAR 660


>gi|321309634|ref|YP_004191963.1| valyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801478|emb|CBY92124.1| valyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 802

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/133 (28%), Positives = 52/133 (39%), Gaps = 13/133 (9%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYRE 318
              NI++H   L+ + RKMSKS  N I   EL E            V+RL  L  TH   
Sbjct: 450 PFQNIYLHGLVLDSKNRKMSKSLNNGIDPIELSEEFGL-------DVVRLFFLANTHPES 502

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
            I F+  +L +    L K    S+     +P+  +    DLN    I  L  L +E    
Sbjct: 503 NIAFSKNKLEKHSKFLHKLRNASSFIKAQNPSTSAFRVEDLN----ILELWIL-KEFVSL 557

Query: 379 HDLLPIFNASAHI 391
            D L     S + 
Sbjct: 558 RDSLGSLYESLNF 570


>gi|241762271|ref|ZP_04760352.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260752688|ref|YP_003225581.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|241373174|gb|EER62804.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258552051|gb|ACV74997.1| arginyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 574

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 53/342 (15%), Positives = 102/342 (29%), Gaps = 73/342 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N      + + R+        +
Sbjct: 133 PT--GPMHMGHCRGAVVGDALASLLDFAGYKVTREYYVNDAGQQVQTLARSAYMRYREAL 190

Query: 93  NDAISIITSKNTQQFVKDTTRLACLA-PTHQPRATNH----------IPQMIYLIQNIIL 141
            + I+I        ++    +L           A             +  M+ +I++ + 
Sbjct: 191 GEEITIPEGLYPGDYLVPVGKLLAEKYGDRYLNAPESEWLALFRETTVAAMMDMIRDDLA 250

Query: 142 ----------HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
                        A      +      +   G   +  ++         E      P + 
Sbjct: 251 LLGIHHDKFTSEAALHKAGIVQKAIDKLEKEGLIYKGVLE-----APKGETPEDWEPVEL 305

Query: 192 ILWKRSTPMEPGWESPWGRGRP---------------GWHIECSAMSSHYLGKVFDI--- 233
            L++ +   +          RP                +H E +A +        DI   
Sbjct: 306 TLFRATKFGDDS-------DRPVQKSDGSYTYFGADLAYHAEKAATADQL----VDIWGA 354

Query: 234 -HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINE 290
            H G +  I      + A +             +    L   G   KMSK +GNF+T+ +
Sbjct: 355 DHAGTVKRI------KAAVAALTQNKVPLDVKLVQMVHLLRGGEPVKMSKRSGNFVTLAD 408

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
           ++             V+R +ML       +DF  +++ EA  
Sbjct: 409 VVSEVGR-------DVVRFSMLTRKADAQMDFDFEKVIEASK 443


>gi|118589112|ref|ZP_01546519.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118438441|gb|EAV45075.1| arginyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 589

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 64/336 (19%), Positives = 111/336 (33%), Gaps = 60/336 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  +L +   E    Y  N  D   +I   AR        
Sbjct: 133 PT--GPMHVGHIRGAVVGDALANILAFAGNEVVKEYYIN--DAGSQIDTLARSAFLRYRE 188

Query: 93  ---------------NDAISIITSKNTQQF---VKDTTRLACLAPTHQPRATNHIPQMIY 134
                           D +  +  K   +F   + D      L P  + RA   I  M+ 
Sbjct: 189 ALGEDIGEIPAGLYPGDYLKPVGEKLKAEFGSSLADMEEREWL-PLVKERA---IAAMLE 244

Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKK 186
           LI+  +    A    +E+ +   ++ + G  +  KID      R               +
Sbjct: 245 LIRQDLA---ALGVEHEVFYSERTLHDRGEGNGSKIDHMLETLRNKGLIYEGTLPPPKGQ 301

Query: 187 NPADF-----ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF------DIHG 235
            P D+      L++ S   +   ++     +        A    Y    F       I+ 
Sbjct: 302 VPDDWEDREQTLFRASDFGD---DTDRALKKSDGSYTYFAADVAYFQDKFERGFTETIYV 358

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLE 293
            G D        +      +D   +    +     L  +G   KMSK +G+FIT+ ++++
Sbjct: 359 LGADHGGYAKRLQAVGKAISDGKTEVVVRFCQLVKLMRDGEPVKMSKRSGDFITLRDVVD 418

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
                        +R  ML      P+DF  +++TE
Sbjct: 419 EVG-------PDPVRFMMLFRKNDAPLDFDFKKVTE 447


>gi|325115535|emb|CBZ51090.1| methionine--tRNAligase, related [Neospora caninum Liverpool]
          Length = 982

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 66/361 (18%), Positives = 106/361 (29%), Gaps = 91/361 (25%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      H+G+    +  DV+ R  R    E        +T  D+   + A     
Sbjct: 284 YTNGP-----PHMGHVYEAVTSDVVARFHRIAGKEVFF-----LTGTDEHGQKIAN---T 330

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGH 144
           +  +      I       F +   +L         R T        + Q     +   G 
Sbjct: 331 AERVGKTPQEICDFFAAGFQEMNKKLHISN-DQYIRTTQA--DHKAVCQWLWKRVQEKGD 387

Query: 145 AY---------EANNEIIFDTS------SIPNYGSFSRRKIDEQKMGTRVPEKYHK---- 185
            Y         E     + +          P  G    +K++E     R+ +   +    
Sbjct: 388 IYLDTYVGWYNEREETFVSEIEARLTDYKDPTSGK-PLQKMEEASYFFRMSKYQERLLKH 446

Query: 186 -KNPADFI--------LWKRSTPMEPGWE-------SPWGRGRPG--------WHIECS- 220
             +  DFI        + KR    EP  +         WG   PG        W    + 
Sbjct: 447 IHDNPDFIRPEERRKNILKR--LEEPLLDLSCSRTTFTWGVPVPGDEKHVMYVWFDALTN 504

Query: 221 -----AM---SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGF 270
                AM   +        ++H  G D+I+ H         C               +GF
Sbjct: 505 YYSATAMNDGARSAFWPA-NVHIIGKDIIWFH----TVIWPCMLMAAELPLPKCVFGHGF 559

Query: 271 LNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLT 328
           +   +G KMSKS GN +  N++L       +   A   R  ++  T Y   + F    LT
Sbjct: 560 VTAADGEKMSKSLGNVVDPNDIL-------KEHDADSFRFYLVRETKYGNDLRFDEDALT 612

Query: 329 E 329
            
Sbjct: 613 A 613


>gi|323457245|gb|EGB13111.1| hypothetical protein AURANDRAFT_19010 [Aureococcus anophagefferens]
          Length = 1109

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 16/88 (18%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQS--CCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D+   G DLI  H      N  A      A    +       NGF+ L+G KMSKS G
Sbjct: 698 PMDLRVSGKDLIGNHLTMCLYNHAAIWPDEAAT---RWPRSMYTNGFVLLDGEKMSKSTG 754

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAM 311
           NF+ ++E           + A  +R A+
Sbjct: 755 NFLMLDEACAL-------YSADAVRFAL 775


>gi|207721577|ref|YP_002252016.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum MolK2]
 gi|206586738|emb|CAQ17323.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum MolK2]
          Length = 877

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCDPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTGTVNWD 165


>gi|84490249|ref|YP_448481.1| isoleucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84373568|gb|ABC57838.1| IleS [Methanosphaera stadtmanae DSM 3091]
          Length = 1055

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 38/85 (44%), Gaps = 12/85 (14%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H   L+ +G+KMSKS GN ++  E++E        + A V+R  +L 
Sbjct: 579 AAFGKAPYKKVLMHGFTLDEDGKKMSKSLGNVVSPEEVIE-------KYGADVLRFYLLD 631

Query: 314 THYREPID---FTVQRLTEAEILLS 335
            +  +P D   F    +  +  L +
Sbjct: 632 AN--KPWDDLKFHWDEVQNSSKLFN 654


>gi|83746765|ref|ZP_00943813.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207744312|ref|YP_002260704.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum IPO1609]
 gi|83726534|gb|EAP73664.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206595717|emb|CAQ62644.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 877

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCDPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTGTVNWD 165


>gi|312623342|ref|YP_004024955.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312203809|gb|ADQ47136.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 653

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 87/467 (18%), Positives = 138/467 (29%), Gaps = 134/467 (28%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y+  P  Y  D  HIG+    +  D + R  R    +    +    TD   + IER
Sbjct: 3   KPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYD---VFFLTGTDEHGQKIER 59

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
             QE    P      I+ S      +KD  +L  ++     R T   H   +  +   + 
Sbjct: 60  KAQEAGKTPQEYVDEIVAS------IKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLY 113

Query: 141 LHGHAYEANNEIIFDTS-------------SIPNYGSFSRRKIDE-----QKMGTRVPEK 182
             G  Y++  E  + T                P+ G    R  +E              K
Sbjct: 114 EQGDIYKSEYEGWYCTPCESFWLDRQLVDGKCPDCGRPVERAREESYFFRLSKYQDALVK 173

Query: 183 YHKKNPADFILWKRSTPME-------PGWE--------SPWGRGRP-------------- 213
           Y +++P DFI+  +S   E       PG E          WG   P              
Sbjct: 174 YIEEHP-DFIV-PQSRANEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDAL 231

Query: 214 -------GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
                  G+  E  +    Y     D+H  G +++  H     A             +  
Sbjct: 232 SNYITALGYMSEDDSKFKKYWPA--DVHLVGKEIVRFHTIIWPAMLMAL--GLPLPKMVF 287

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------THYREP 319
            +G+L LEG KMSKS GN +             + +    +R  +L         H    
Sbjct: 288 GHGWLLLEGGKMSKSKGNVV-------DPVILAQKYGVDSLRYFLLREIPFGADGH---- 336

Query: 320 IDFTVQRLT---------------------------------EAEILLSKWPQTSTSKGI 346
             F+   L                                  EA+  L    +  T    
Sbjct: 337 --FSEDALRTRHNSDLANDLGNLLSRTVAMIEKYFDEIIHLPEAKEDLDN--ELITLAKE 392

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           +   V   L ++L   +A+  + KL   + K  D          +LG
Sbjct: 393 VYEKVCRCL-DELQFSNALIEIWKLIARANKYID-----ETMPWVLG 433


>gi|254431958|ref|ZP_05045661.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626411|gb|EDY38970.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 880

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 52/183 (28%), Gaps = 26/183 (14%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
             F A+      M+   P      H+G+ R  ++ DV+ R+ R     + V +       
Sbjct: 36  EPFVAL-----SMF---PYPSGNLHMGHVRNYVITDVIARVQRMRG--RPVLHPMGWDAF 85

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
                  A      I         T +N     +   RL       +  AT H       
Sbjct: 86  GLPAENAA------IERGVDPGDWTDRNIAAMRQQLQRLGLSIDWDREVATCHADYY-RW 138

Query: 136 IQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            Q      +  G AY+ +  +              +  ++D +    R      K+    
Sbjct: 139 TQWLFLQFLEAGLAYQKDATVNWDPVDQT----VLANEQVDSEGRSWRSGALVEKRQLRQ 194

Query: 191 FIL 193
           + L
Sbjct: 195 WFL 197


>gi|134298586|ref|YP_001112082.1| isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|172044256|sp|A4J2F4|SYI_DESRM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134051286|gb|ABO49257.1| Isoleucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 931

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 49/137 (35%), Gaps = 17/137 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 575 SVAVTGKPPYKTVLTHGFTVDEKGRKMSKSLGNVVDPLKICSQMG-------ADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS---- 363
               YR  +  +   L +      K   T+     +    DP      Y+ L        
Sbjct: 628 SSADYRADLALSQNILKQMTESYRKIRNTARFLLGNLYDFDPVKDKVAYDKL--PELDRV 685

Query: 364 AIQALHKLARESTKNHD 380
           A+  LHKL ++    ++
Sbjct: 686 ALMELHKLIKQVLAAYE 702


>gi|15646154|ref|NP_208338.1| leucyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024678|sp|P56457|SYL_HELPY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2314727|gb|AAD08585.1| leucyl-tRNA synthetase (leuS) [Helicobacter pylori 26695]
          Length = 806

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +   G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYLHLDEPFKQL-ITQGMVLKNGAKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIENMQKEFEALG 112


>gi|330813622|ref|YP_004357861.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
 gi|327486717|gb|AEA81122.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
          Length = 917

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC         +I  H   ++ +G+KMSKS GN ++ +E++       + + A ++RL 
Sbjct: 575 QSCGTRGQAPYKSILCHGFVVDGKGQKMSKSLGNVVSPDEVI-------KKYGADILRLW 627

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           ++ + Y + +      L +      K   T
Sbjct: 628 VIASDYSDDLKIDNAILEQHSQSYRKIRNT 657


>gi|289620721|emb|CBI52731.1| unnamed protein product [Sordaria macrospora]
          Length = 1105

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    +         E        NG L L G KMSKS GNF+T++
Sbjct: 692 PLDIRVSGKDLIPNHLTFWLYNHIALFPREYWPKSVRANGHLQLNGEKMSKSTGNFMTLD 751

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +++       + + A   R+A+
Sbjct: 752 DVV-------KKYGADAARVAL 766


>gi|86150271|ref|ZP_01068498.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88597490|ref|ZP_01100724.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218562466|ref|YP_002344245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|25009405|sp|Q9PP85|SYM_CAMJE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|85839387|gb|EAQ56649.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88190082|gb|EAQ94057.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360172|emb|CAL34966.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|284926083|gb|ADC28435.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 628

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 122 HYCISCESF 130



 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   EG KMSKS GN +   E+++       ++ +   R  +L    +    DF+   
Sbjct: 285 HGWWTKEGEKMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENM 337

Query: 327 L 327
           L
Sbjct: 338 L 338


>gi|322834473|ref|YP_004214500.1| isoleucyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169674|gb|ADW75373.1| isoleucyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 938

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 50/143 (34%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN I   +++             ++RL 
Sbjct: 576 ISTAMKGKAPYKQVLTHGFTVDGQGRKMSKSIGNTIAPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   I  + + L  A     +   T+     +    DPA+ S           + 
Sbjct: 629 VASTDYTGEIAVSDEILKRAADSYRRIRNTARFLLANLNGFDPALHSV------APEDMV 682

Query: 367 ALHKLA--RESTKNHDLLPIFNA 387
            L + A  R      +++  + A
Sbjct: 683 VLDRWAVGRAKAAQDEIIAAYEA 705


>gi|308183700|ref|YP_003927827.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065885|gb|ADO07777.1| leucyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 806

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +   G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKNGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSAL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    + +
Sbjct: 617 EGAHRFIKRLYDKANA 632



 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|217033844|ref|ZP_03439269.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
 gi|216943742|gb|EEC23185.1| hypothetical protein HP9810_877g48 [Helicobacter pylori 98-10]
          Length = 806

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSTL 616

Query: 328 TEAEILLSKWPQTSTS 343
             A   + +    +++
Sbjct: 617 EGAHRFIKRLYDKASA 632



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|118595221|ref|ZP_01552568.1| isoleucyl-tRNA synthetase, class Ia [Methylophilales bacterium
           HTCC2181]
 gi|118440999|gb|EAV47626.1| isoleucyl-tRNA synthetase, class Ia [Methylophilales bacterium
           HTCC2181]
          Length = 925

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 54/145 (37%), Gaps = 17/145 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +       +  H   ++ +G KMSKS GN I   ++++        + A ++RL +
Sbjct: 578 SCAINEKAPFKALLTHGFVVDGKGYKMSKSKGNVIAPQKIMD-------QYGADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA------- 364
             T Y   ++ + + L        +   T            S    DL +  A       
Sbjct: 631 ATTDYSAELNVSDEILKRVSDNYRRIRNTLRFLCANLEDFDS--RKDLVSSDALLGLDQY 688

Query: 365 -IQALHKLARESTKNHDLLPIFNAS 388
            I ++ +L +   ++++    + A 
Sbjct: 689 SIYSVDRLQKSVLEHYEKFEFYLAM 713


>gi|294658344|ref|XP_002770764.1| DEHA2F07414p [Debaryomyces hansenii CBS767]
 gi|202953060|emb|CAR66291.1| DEHA2F07414p [Debaryomyces hansenii]
          Length = 1091

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 25/144 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG L L   KMSKS GNF+T+ 
Sbjct: 680 PLDVRVSGKDLIPNHLTFFIYTHVALFPKRLWPKGIRSNGHLMLNHAKMSKSTGNFMTLE 739

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ------- 339
           +++E        + A   R+A+      + +   +F       A + L+   +       
Sbjct: 740 QIVE-------KFGADASRIALADAG--DTVEDANFDESNANAAILRLTTLKEWCEEIIK 790

Query: 340 ------TSTSKGIIDPAVLSALYN 357
                 T  +    D A  + + +
Sbjct: 791 NKDSLRTGPTDSFFDVAFENEMND 814


>gi|292491025|ref|YP_003526464.1| isoleucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579620|gb|ADE14077.1| isoleucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 940

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 11/136 (8%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   LG   D++  G D      ++ +  S           +  H   ++ EGRKM
Sbjct: 547 CVLATREELGVPADLYLEGSDQHRGWFQSSLLTSVAMRGTAPYRTVLTHGFTVDAEGRKM 606

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++ +         A ++RL +  T YR  +  + + L        +  
Sbjct: 607 SKSRGNVVVPQQVMGSLG-------ADILRLWVAATDYRGEMSVSDEILKRIADSYRRMR 659

Query: 339 QTS----TSKGIIDPA 350
            T+     +    DPA
Sbjct: 660 NTARYLLANLNGFDPA 675


>gi|322421576|ref|YP_004200799.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127963|gb|ADW15523.1| isoleucyl-tRNA synthetase [Geobacter sp. M18]
          Length = 925

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 227 LGKVFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           LG   D++  G D      H + +A S          N+  H   ++  GRKMSKS GN 
Sbjct: 552 LGSPADMYLEGSDQHRGWFHSSLLA-SVGTRGRAPYKNVLTHGFVMDGAGRKMSKSVGNV 610

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +   +++       + + A V+RL +    YR+ +  + + LT       +   T
Sbjct: 611 VAPEDVI-------KKFGADVLRLWVAAQDYRDDLRISQEILTRLSESYRRIRNT 658


>gi|225175106|ref|ZP_03729102.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225169282|gb|EEG78080.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 822

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/217 (17%), Positives = 73/217 (33%), Gaps = 50/217 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +           +E    + +  G +N +G KMSKS G
Sbjct: 527 PVDQYIGGIEHAILHLLYSRFFTKVLHDAGMTEAVEPFTRL-LAQGMVNKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WP--- 338
           N ++ +E++E        + A   RL +L      + +D++ + +      L + W    
Sbjct: 586 NVVSPDEIIE-------KYGADTGRLFILFAAPPEKDLDWSDRGVEGCYRFLKRVWRLVD 638

Query: 339 --------------QTSTSKGIIDPAVLSAL---YND----LNTVSAIQALHKLA----- 372
                         +       +  A  +AL     D     N  +AI A+ +       
Sbjct: 639 RYADDVRGQNGETAEYDKQDQELRRAAHTALKKVTEDIEERFNFNTAISAVMEAVNTAYG 698

Query: 373 ----RESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
               +E   N   +  F     +L +     HL + +
Sbjct: 699 YMNEKEDHINTAAMAEFLEML-VLVLAPFAPHLGEEM 734



 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 40/146 (27%), Gaps = 16/146 (10%)

Query: 14  KITEF-QAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +  +F +  +    + YV    P      H+G+ R   + DVL R L        V +  
Sbjct: 18  EKEDFYKTDEEGKKKYYVLEMFPYPSGRLHMGHMRVYSIGDVLARFLNMRGY--SVLHPM 75

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                       A +           +  T  N +   K    L       +  AT   P
Sbjct: 76  GWDAFGLPAENAAIERQVH------PAEWTYANIEAMKKQQKALGISYDWDREVAT-CAP 128

Query: 131 QMIYLIQ----NIILHGHAYEANNEI 152
                 Q         G AY+    +
Sbjct: 129 DYYKWTQWLFLLFYKRGLAYKKKASV 154


>gi|156936945|ref|YP_001434741.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|189030282|sp|A8A8T2|SYL_IGNH4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|156565929|gb|ABU81334.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 1022

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 67/199 (33%), Gaps = 32/199 (16%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +K     + NGF+NLEG+KMSKS GN I I   +   
Sbjct: 656 SGKDLIRNHLTFFIFNHAAIFPEDKWPRQIVVNGFVNLEGKKMSKSLGNIIPITVAI--- 712

Query: 296 KFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------- 347
               RS+   +IRL +L         DF  + ++ A   L +                  
Sbjct: 713 ----RSFAPDIIRLVLLHSAELGSDADFRTEMVSRAISNLREIKSIVEKVKDYNGPRPAN 768

Query: 348 --------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
                         D   ++ +  DL        L+ +     +  + L    A    L 
Sbjct: 769 LTMLDAWYLSSFVKDVENVTNMMEDLKIREVTNVLYFIL--LNRTKEYLNALEAMGRGLD 826

Query: 394 IEVCKEHLNKNISIAIEKL 412
            EV K  L   +   ++ +
Sbjct: 827 -EVAKWVLRYTVERWVKMM 844



 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 21 IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
          +DP+  + YV     Y     H+G++R   V D   R  R     
Sbjct: 33 VDPNRPKFYVTAAFPYPNSPMHLGHSRTYSVTDAYARFKRMRGFN 77


>gi|302842510|ref|XP_002952798.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
 gi|300261838|gb|EFJ46048.1| hypothetical protein VOLCADRAFT_93543 [Volvox carteri f.
           nagariensis]
          Length = 1034

 Score = 49.9 bits (118), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 6/108 (5%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A+ I     +  H   L+ +G+KMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 622 SVAANGIAPYKQVLTHGFVLDEKGQKMSKSLGNVVDPRVVIEGGKDVKQQPAYGADVLRL 681

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLS 353
            +    Y   +      L +   +  K   T      +    DP V +
Sbjct: 682 WVASVDYTSDVAIGSSILRQMADMYRKVRGTLRFLLGNLADYDPQVHA 729


>gi|303311097|ref|XP_003065560.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105222|gb|EER23415.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039371|gb|EFW21305.1| leucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1131

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 715 PLDVRVSGKDLIQNHLTFWLYVHIALFPEEYWPRSVRANGHLLLNGEKMSKSTGNFLTLR 774

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 775 DAVD-------KYGADATRIAF 789


>gi|152993379|ref|YP_001359100.1| isoleucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|166229775|sp|A6QB84|SYI_SULNB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151425240|dbj|BAF72743.1| isoleucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 918

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 51/142 (35%), Gaps = 20/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + I     I  H   ++ +G KMSKS GN +   +++       + + + ++RL +
Sbjct: 584 SSAINGIAPYETIITHGFTMDAKGEKMSKSKGNVVAPEKVV-------KQFGSEILRLWV 636

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN---TVSAIQAL 368
            ++ Y+     +   L +      K   T           L A  NDL+   +  A   L
Sbjct: 637 ALSDYQNDQKISDDILKQTAEQYRKIRNTFR--------FLLANVNDLDALVSADAYGEL 688

Query: 369 HKLARESTKNHDLLPIFNASAH 390
            +      K  D+      S  
Sbjct: 689 DRWI--LNKADDVFASVKESFE 708


>gi|237741055|ref|ZP_04571536.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229431099|gb|EEO41311.1| isoleucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 709

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVSPEDVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNIVKQMSEAYRRIRNTAR 664


>gi|254302496|ref|ZP_04969854.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322688|gb|EDK87938.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 933

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVSPEDVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNIVKQMSEAYRRIRNTAR 664


>gi|119194645|ref|XP_001247926.1| leucyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
          Length = 1131

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 715 PLDVRVSGKDLIQNHLTFWLYVHIALFPEEYWPRSVRANGHLLLNGEKMSKSTGNFLTLR 774

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 775 DAVD-------KYGADATRIAF 789


>gi|13507762|ref|NP_109711.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501031|sp|P75091|SYM_MYCPN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1673790|gb|AAB95779.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 512

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 62/163 (38%), Gaps = 15/163 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DV+ R  +    E    ++    +  +KI  +A+       +      
Sbjct: 17  PHIGHAFTTILADVIKRYKQQNGYE--AYFLTGTDEHGNKIESKAKS------LGLDPQT 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +N   F +   +L      H  R T+  H  Q+ +  Q +   G  Y++N E  +  
Sbjct: 69  FVDQNVAYFQQMWKQLDI-NFDHFIRTTDLSHKAQVQHAFQLLYDKGLIYQSNWEGAYCV 127

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
               NY ++ ++ +  +        +     P+ FI +K S  
Sbjct: 128 ECEQNYFTYDKQTMLCEIGHQLTLVQE----PSLFIAFKDSKD 166


>gi|86150808|ref|ZP_01069024.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85841978|gb|EAQ59224.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 530

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFH 485


>gi|254517164|ref|ZP_05129222.1| isoleucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674669|gb|EED31037.1| isoleucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 934

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 11/109 (10%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A        +  H   ++ +GRKMSKS GN I   + +  +        A ++RL +  T
Sbjct: 577 AYGEAPYKAVLTHGFTVDGDGRKMSKSIGNIIPARKAMNDQG-------ADILRLWLAST 629

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDL 359
            YR  +  + + L        +   T+     +    DPA       DL
Sbjct: 630 DYRNEVAVSDEILKRTGDSYRRIRNTARFMLANLSGFDPAEHIVADEDL 678


>gi|169609124|ref|XP_001797981.1| hypothetical protein SNOG_07648 [Phaeosphaeria nodorum SN15]
 gi|111063994|gb|EAT85114.1| hypothetical protein SNOG_07648 [Phaeosphaeria nodorum SN15]
          Length = 1164

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E     +  NG L L G KMSKS GNF+TI 
Sbjct: 724 PLDMRTSGKDLIQNHLTFNLYVHTAIFPKENWPRSFRVNGHLMLNGEKMSKSTGNFLTIA 783

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
             +E        + A   R+A+
Sbjct: 784 GAVE-------KFGADATRIAL 798


>gi|86150379|ref|ZP_01068605.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|85839204|gb|EAQ56467.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|284926399|gb|ADC28751.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
          Length = 530

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFH 485


>gi|222824160|ref|YP_002575734.1| isoleucyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782380|sp|B9KD44|SYI_CAMLR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222539382|gb|ACM64483.1| isoleucyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 921

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S   +      NI  H   ++ +G+KMSKS GN +    +        +++   ++RL 
Sbjct: 584 ISTAINHKTPYKNILTHGFTVDEKGQKMSKSKGNVVLPQNV-------AKNYGVEILRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           ++++ Y   +  +   L +      K   T
Sbjct: 637 IMLSDYSTDLKISDNILKQVSEQYRKIRNT 666


>gi|67526489|ref|XP_661306.1| hypothetical protein AN3702.2 [Aspergillus nidulans FGSC A4]
 gi|40740720|gb|EAA59910.1| hypothetical protein AN3702.2 [Aspergillus nidulans FGSC A4]
 gi|259481757|tpe|CBF75578.1| TPA: leucyl-tRNA synthetase (AFU_orthologue; AFUA_6G12630)
           [Aspergillus nidulans FGSC A4]
          Length = 1062

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 43/223 (19%), Positives = 63/223 (28%), Gaps = 60/223 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         +        NG L L G KMSKS GNF+T+ 
Sbjct: 652 PMDVRVSGKDLIQNHLTFFLYIHVALFPPQYWPRGVRANGHLLLNGDKMSKSTGNFLTLK 711

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + ++        + A   R+A                                  GI D 
Sbjct: 712 DSVD-------KFGADATRIAF----------------------------ADAGDGIEDA 736

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
               ++ N  N +  +  L +   E  K+  L                    +K     I
Sbjct: 737 NFEESVANS-NILR-LFTLKEWIEEVVKDESLRT-----------GPADHFWDKVFDNEI 783

Query: 410 EKLVQERLILLKMKKFSSA------------DYIRKQLESKGF 440
             LV+E     +   F  A            D  R+   S G 
Sbjct: 784 NTLVREGKKNYQDTNFKLALKSSLYDLVGARDAYREACISAGI 826


>gi|296272197|ref|YP_003654828.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096372|gb|ADG92322.1| leucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 821

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 15/134 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H       +   ++       E    + +  G +  +G KMSKS GN 
Sbjct: 536 DQYIGGIEHAILHLLYSRFFTKALNKLGYTNSKEPFKKL-LTQGMVLKDGAKMSKSKGNV 594

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           +  ++++E        + A   RL ML      + +D+    +  A   + ++       
Sbjct: 595 VDPDKIVE-------KYGADTARLFMLFAAPPTKELDWNDSAVDGAFKFIKRFTAKVEMA 647

Query: 345 GIIDPAVLSALYND 358
             I    ++++ +D
Sbjct: 648 EGISIEDINSIDHD 661


>gi|291542661|emb|CBL15771.1| Isoleucyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 921

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 53/140 (37%), Gaps = 23/140 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ E RKMSKS GN I+  +++       + + A V+RL +
Sbjct: 580 SVATRGRAPYKAVLTHGMILDDESRKMSKSLGNGISPQDVI-------KQYGADVLRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVS-- 363
             T Y+  +  +   L +      K   T+       S    D  ++     D + V   
Sbjct: 633 ASTDYQTDVHISKDILKQISESYRKIRNTARYILGNISDFNPDTDMV-----DFDKVLPI 687

Query: 364 ---AIQALHKLARESTKNHD 380
              A+  L+ L  +   ++D
Sbjct: 688 DKWALAKLNDLITKVRTSYD 707


>gi|217967945|ref|YP_002353451.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217337044|gb|ACK42837.1| leucyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 810

 Score = 49.9 bits (118), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 38/206 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    ++   G +  +G+ MSKS G
Sbjct: 526 PVDQYTGGIEHAILHLLYSRFITKVLYDAGYSPVREPFKRLFT-QGMVYKDGQIMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++++ ++E       ++ A   RL +L +      I+++ + +  A   L+++ +   
Sbjct: 585 NIVSVDYMVE-------NYGADTARLFILFVAPPEVDIEWSDEGVEGANRFLNRFWRLVL 637

Query: 343 SKGIIDPAV---------------LSALYND-----LNTV-SAIQALHKLARESTKNHDL 381
               ++P +               +  +  D      NT  +AI  L  L  E  ++   
Sbjct: 638 EDAEVEPKIDEEQEKLIKRKLHKTIKKVTEDIENFKFNTAIAAIMELTNLLFEHKRSFGR 697

Query: 382 LPIFNAS--AHILGIEVCKEHLNKNI 405
            P F  +    IL +     H+ + +
Sbjct: 698 TPAFEEAIRTSILLLSPFVPHITEEL 723



 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 35/120 (29%), Gaps = 13/120 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R             V N     D   + A  E+ +I  
Sbjct: 41  PYPSGDLHMGHMRNYTIGDVVARYYTMKGYN-----VLNPMGW-DAFGQPA--ENAAIKN 92

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T +N  +  +   ++  +        T   P      Q     +   G AY  
Sbjct: 93  KVHPKEWTYRNIARMKEQLFKMGVVY-DWDREVTACAPDYYKWTQWIFLKLYERGLAYRK 151


>gi|225465204|ref|XP_002264666.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1085

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 51/159 (32%), Gaps = 43/159 (27%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I               +  NG + L   KMSKS GNF T+ 
Sbjct: 669 PFDLRVSGKDLIQNHLTFCIYNHTAIMSKNHWPRGFRCNGHIMLNSEKMSKSTGNFRTLR 728

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E                           +F+           +++       G+ D 
Sbjct: 729 QAIE---------------------------EFSADA--------TRFSLADAGDGVDDA 753

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
             +        T +A  A+ +L +E +   ++L    + 
Sbjct: 754 NFV------FETANA--AILRLTKELSWMEEVLEAEASL 784


>gi|167044145|gb|ABZ08828.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG5C13]
          Length = 951

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 38/177 (21%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +                + NG + ++G+KMSKS GN I + E +   
Sbjct: 578 SGRDLVPNHLTFFVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGNIIPLREAV--- 634

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
               R + A  IRL +L          + + L +A+  +                 L+++
Sbjct: 635 ----RKYGADPIRLTIL---------ISAELLQDADFNVEAIKGIKNK--------LASM 673

Query: 356 YNDLNTVSAIQ-------------ALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           Y D     A +              L  L   + K+ D + +  A  HIL  +   E
Sbjct: 674 YEDCTKTKAEKFPELEPEDKWIHGILQNLVLNAGKSMDEIRLREALHHIL-FDFDSE 729


>gi|52841172|ref|YP_094971.1| isoleucyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|81823443|sp|Q5ZWZ6|SYI_LEGPH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52628283|gb|AAU27024.1| isoleucyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 931

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 18/119 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+K+SKS GN++ +++L+           A ++RL +  T YR  +  + + 
Sbjct: 590 HGYTVDAEGKKLSKSKGNYVALDKLVNQHG-------ADILRLWVASTDYRHEVSISEEI 642

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--LHKLARESTKNHDLL 382
           +        +   T+          L A   D N     I A  L +L R + K   LL
Sbjct: 643 IKRNADAYRRIRNTAR--------FLLANLFDFNPASDCIDAKELLELDRWALKRCQLL 693


>gi|85110062|ref|XP_963218.1| hypothetical protein NCU09463 [Neurospora crassa OR74A]
 gi|135140|sp|P10857|SYLC_NEUCR RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|168832|gb|AAA33593.1| leucyl-tRNA synthetase [Neurospora crassa]
 gi|28924888|gb|EAA33982.1| hypothetical protein NCU09463 [Neurospora crassa OR74A]
 gi|38524246|emb|CAE75711.1| leucine--tRNA ligase, cytosolic [Neurospora crassa]
          Length = 1123

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    +         E        NG L L G KMSKS GNF+T++
Sbjct: 710 PLDIRVSGKDLIPNHLTFWLYNHIALFPREYWPKSVRANGHLQLNGEKMSKSTGNFMTLD 769

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +++       + + A   R+A+
Sbjct: 770 DVV-------KKYGADAARVAL 784


>gi|9858190|gb|AAG01037.1|AF293346_1 cytosolic leucyl-tRNA synthetase [Candida albicans]
          Length = 1097

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 47/145 (32%), Gaps = 25/145 (17%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
              D+   G DLI  H    I                  NG L L   KMSKS GNF+T+
Sbjct: 683 HPLDVRVSGKDLIPNHLTFFIYTHVALFPKRFWPRGVRANGHLLLNNAKMSKSTGNFMTL 742

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWP------- 338
            +++E        + A   R+AM      + +   +F       A + L+          
Sbjct: 743 EQIIE-------KFGADASRIAMADAG--DTVEDANFDEANANAAILRLTTLKDWCEEEV 793

Query: 339 ------QTSTSKGIIDPAVLSALYN 357
                 +        D A  + + +
Sbjct: 794 KNQDKLRIGDYDSFFDAAFENEMND 818


>gi|301633711|gb|ADK87265.1| methionine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 512

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 15/163 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DV+ R  +    E    ++    +  +KI  +A+       +      
Sbjct: 17  PHIGHAFTTILADVIKRYKQQNGYE--AYFLTGTDEHGNKIESKAKS------LGLDPQT 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +N   F +   +L      H  R T+  H  Q+    Q +   G  Y++N E  +  
Sbjct: 69  FVDQNVAYFQQMWKQLDI-NFDHFIRTTDLSHKAQVQQAFQLLYDKGLIYQSNWEGAYCV 127

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
               NY ++ ++ +  +        +     P+ FI +K S  
Sbjct: 128 ECEQNYFTYDKQTMLCEIGHQLTLVQE----PSLFIAFKDSKD 166


>gi|206602933|gb|EDZ39413.1| Leucyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 828

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 37/135 (27%), Gaps = 15/135 (11%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y     P      H+G+ R   + D L R  R       V +           
Sbjct: 29  QPGKKTFYCLEMFPYPSGRIHMGHVRNYSIGDALARYKRMRGFN--VLHPMGWDSFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      I      ++ T +N     +  +RL  L+       T  +P+     Q  
Sbjct: 87  ENAA------IQRGIHPAVWTDQNIAHMKEQLSRLG-LSYDWSREVTTCLPEYYRWNQWF 139

Query: 138 --NIILHGHAYEANN 150
                  G AY+   
Sbjct: 140 FLKFYEKGLAYKKEG 154



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 15/117 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +         D  E      +  G +  +G KMSKS G
Sbjct: 529 PVDQYIGGVEHAILHLLYSRFFTRALKDLGIVDSPEPF-RSLLTQGMVLKDGAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           N +  ++L+E        + A  +RL  +      + + +  + +  A   L +  Q
Sbjct: 588 NVVDPDQLIER-------YGADTVRLFTLFSAPPDKDLAWDDKAVEGAYRFLGRLYQ 637


>gi|147841413|emb|CAN66687.1| hypothetical protein VITISV_037862 [Vitis vinifera]
          Length = 1085

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 51/159 (32%), Gaps = 43/159 (27%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I               +  NG + L   KMSKS GNF T+ 
Sbjct: 669 PFDLRVSGKDLIQNHLTFCIYNHTAIMSKNHWPRGFRCNGHIMLNSEKMSKSTGNFRTLR 728

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E                           +F+           +++       G+ D 
Sbjct: 729 QAIE---------------------------EFSADA--------TRFSLADAGDGVDDA 753

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
             +        T +A  A+ +L +E +   ++L    + 
Sbjct: 754 NFV------FETANA--AILRLTKELSWMEEVLEAEASL 784


>gi|121998924|ref|YP_001003711.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166231613|sp|A1WYZ7|SYL_HALHL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121590329|gb|ABM62909.1| leucyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 817

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 53/160 (33%), Gaps = 38/160 (23%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    + +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 559 EPFTRL-LTQGMVLKDGTKMSKSKGNTVDPQELVDR-------FGADTVRLFTMFAAPPD 610

Query: 318 EPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPAV---------------LSALY 356
           + ++++   +  A   L +          +     +DP                 ++   
Sbjct: 611 QSLEWSDSGVEGAYRFLRRLHGLVRDHVAAGPAPALDPQALSDTQRDLRRKVHETIAKAS 670

Query: 357 ND------LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           +D       NT  AI A+ +L     K  D      A   
Sbjct: 671 DDVGKRLTFNT--AIAAVMELCNALGKAQDDSAAGRAVMQ 708


>gi|283954624|ref|ZP_06372142.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793816|gb|EFC32567.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 917

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 62/168 (36%), Gaps = 34/168 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IA +  A       +I  H    + +G+KMSKS GN I          +  +++   ++R
Sbjct: 586 IAINESA----PYESILTHGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILR 634

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-------- 360
           L +L++ Y   +  +   L +      K   T           L A  NDLN        
Sbjct: 635 LWILLSDYSSDLKISDNILKQVGEQYRKIRNTIR--------FLLANTNDLNDLKVKEFS 686

Query: 361 ------TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                    A +   K A+E+   ++    F+   + L  ++   +L+
Sbjct: 687 FIDKWILSRATKV-FKAAKEAFFAYEFSKGFSLLLNFLSADLSGIYLD 733


>gi|229097133|ref|ZP_04228098.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|228686305|gb|EEL40218.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 517

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 71/428 (16%), Positives = 131/428 (30%), Gaps = 76/428 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQNLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    R     P   I D     +       ++F K               
Sbjct: 69  RFRKVPKNIDPSFAR-YIGMPYCDIPDPHGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQH 127

Query: 124 ---RATNHIPQMIYL---------IQNIILHGHAYEANNEIIFDTSSIPN-YGSFSR--R 168
              R+  +   ++           I      G  +E + E  +  +      G  +    
Sbjct: 128 AEYRSGRYNGNILEALHKRKEIYDILMRFKTGVHFEEDRENFYPVTLYCERCGKDATTIT 187

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
           + DE     R   +   +N    +    +  M+  W+  W      W IE          
Sbjct: 188 QFDEVLETVRYACECGNENELSVV---NTNKMKLNWKIDWPMR---WMIEDVIFEP---- 237

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFI 286
                  GG D         +++    +   + A  ++   F+ L+G   KMS S+GN I
Sbjct: 238 -------GGRDHSSETGSYNVSKEIVREIFNREAPYYVAYDFIGLKGNHEKMSSSSGNSI 290

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTS 343
           T ++LL         +   VI        YR    F     + +        +   +  +
Sbjct: 291 TPSDLLNV-------YVPEVILFMF--AKYRPGAVFHIGLDEDVIRNYTEYERLKDSYEN 341

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           + + +  +  A+              KL+R   + ++  P FN  A  L +      + +
Sbjct: 342 EALKNEDLFDAI--------------KLSRVDNRFNEY-PKFNQVASTLPLLNFDSSILQ 386

Query: 404 NISIAIEK 411
           NI   I++
Sbjct: 387 NILEKIDR 394


>gi|19703419|ref|NP_602981.1| isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328739|ref|ZP_06871253.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|81485032|sp|Q8RH47|SYI_FUSNN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19713491|gb|AAL94280.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154074|gb|EFG94878.1| isoleucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 933

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EG+KMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGKKMSKSLGNTVSPEDVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNIVKQMSEAYRRIRNTAR 664


>gi|332187136|ref|ZP_08388876.1| arginyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012836|gb|EGI54901.1| arginyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 574

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 59/332 (17%), Positives = 110/332 (33%), Gaps = 53/332 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +   +    Y  N       ++ R+        +
Sbjct: 133 PT--GPMHMGHCRGAVVGDALATLLEFAGHKVIREYYVNDAGGQVDVLARSAHLRYREAL 190

Query: 93  NDAISIITSKNTQQFVK--------DTTRLACLAPTHQPRA---TNHIPQMIYLIQNIIL 141
            + I I       +++K        +       AP  +      T  +  M+ +I+  + 
Sbjct: 191 GETIEIPEGLYPGEYLKPVGEALAAEFGNAYVDAPESEWLVLFRTRAVAAMMAMIREDLA 250

Query: 142 -HGHAYEANNEIIFDTSSIPNYGS--------FSRRKIDEQKMGTRVPEKYHKKNPADFI 192
             G     ++++    + +   G          SR  + +  +     E      P +  
Sbjct: 251 LLG----IHHDLFSSEAELQAAGKPEAAEAELRSRGLVYDGVLEAPKGETPEDWEPVELP 306

Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDI----HGGGLDLIFP 243
           L++ S   +   + P  +    W    + ++ HY          DI    H G +  I  
Sbjct: 307 LFRSSQFGDDQ-DRPIKKSNGAWTYFGADLAYHYQKAQTADQLIDIWGADHAGTVKRI-- 363

Query: 244 HHENEIAQSCCADRIE-KTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGR 300
                +A        + K     +    L   G   KMSK  GNF+T+ +++       R
Sbjct: 364 -----VAAVEALTGGKTKFDVKLVQMVRLLRGGEPVKMSKRAGNFVTLADVV-------R 411

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
                V+R  ML       +DF   ++ EA  
Sbjct: 412 EVGKDVVRFTMLTRRSDAQMDFDFAKVVEASK 443


>gi|229103201|ref|ZP_04233886.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228680225|gb|EEL34417.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 517

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 67/427 (15%), Positives = 128/427 (29%), Gaps = 74/427 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQNLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIER--ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP-- 123
             R +    D    R            +   +       ++F K                
Sbjct: 69  RFRKVPKNIDPSFARYIGMPYCGIPDPHGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQHA 128

Query: 124 --RATNHIPQMIYL---------IQNIILHGHAYEANNEIIFDTSSIPN-YGSFSR--RK 169
             R+  +   ++           I      G  +E + E  +  +      G  +    +
Sbjct: 129 EYRSGRYNGNILEALHKRKEIYDILMRFKTGVHFEEDRENFYPVTLYCERCGKDATTITQ 188

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
            DE     R   +   +N    +    +  M+  W+  W      W IE           
Sbjct: 189 FDEVLETVRYACECGNENELSVV---NTNKMKLNWKIDWPMR---WMIEDVIFEP----- 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFIT 287
                 GG D         +++        + A  ++   F+ ++G   KMS S+GN IT
Sbjct: 238 ------GGRDHSSETGSYNVSKEIVRKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSIT 291

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK 344
            ++LL       + +   VI        YR    F     + +        +   +  ++
Sbjct: 292 PSDLL-------KVYVPEVILFIF--AKYRPGAAFHIGLDEDVIRNYTEYERLKDSYENE 342

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
            + +  +  A+              KL+R   +  +  P FN  A  L +      + +N
Sbjct: 343 ALKNEDLFDAI--------------KLSRVDNRFKEY-PKFNQVASTLPLLNFDSSILQN 387

Query: 405 ISIAIEK 411
           I   I++
Sbjct: 388 ILEKIDR 394


>gi|254459954|ref|ZP_05073370.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206676543|gb|EDZ41030.1| isoleucyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 995

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 55/179 (30%), Gaps = 16/179 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I    ++       + + A ++RL 
Sbjct: 648 QACGTLGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPETVV-------KQYGADILRLW 700

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-NDLNTVSA----- 364
           +    Y        + L        +   T             A   +  +         
Sbjct: 701 VAQVDYTSDQRIGPEILKGVADSYRRLRNTMRFMLGSLNDFSEADRVDPADMPELERWVL 760

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLILL 420
             +  L +  +   K+ D   +F+A  +   +E+   + +        +     R    
Sbjct: 761 HRLAELDETVQNGYKSFDFQGVFSAVFNFATVELSSFYFDIRKDALYCDGDTALRRAAR 819


>gi|322379139|ref|ZP_08053536.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380431|ref|ZP_08054633.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147142|gb|EFX41840.1| leucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148435|gb|EFX42938.1| leucyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 815

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 8/74 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRL 327
           G +   G KMSKS GN +T  E+LE        + A + R  +  +    + +++  Q L
Sbjct: 573 GMVLKNGAKMSKSKGNVVTPQEILE-------KYGADIARAYIHFVAPPNKELEWNDQAL 625

Query: 328 TEAEILLSKWPQTS 341
             A   L ++ + S
Sbjct: 626 EGAARFLKRFYEKS 639



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 22/83 (26%), Gaps = 8/83 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D L R  R       V +              A +       
Sbjct: 43  PYPSGEVHMGHVRNYAIGDALARYYRQVGYN--VLHPMAFDAFGMPAENAAIKHQIH--- 97

Query: 93  NDAISIITSKNTQQFVKDTTRLA 115
                I T KN     ++   L 
Sbjct: 98  ---PKIWTEKNIANMQEEFKALG 117


>gi|121596702|ref|YP_990025.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|121224500|gb|ABM48031.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
          Length = 989

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 644 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTR-------DADILRLWIA 696

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 697 STDYAAEMSISDEILERVVETYRRMRNT 724


>gi|167906817|ref|ZP_02494022.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 878

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 621 CAADGHAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 673

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 674 STDYAAEMSISDEILERVVETYRRMRNT 701


>gi|103486626|ref|YP_616187.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98976703|gb|ABF52854.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 575

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 61/369 (16%), Positives = 117/369 (31%), Gaps = 78/369 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL Y   E    Y  N       ++ R+        +
Sbjct: 133 PT--GPMHVGHCRGAVVGDALAALLEYAGHEVIREYYVNDAGAQVDVLARSVHMRYREAL 190

Query: 93  NDAISIITSKNTQQFVKDT-----TRLACLAPTHQPRA----------TNHIPQMIYLIQ 137
            +    + +     +  D       +LA         A             +  M+ +I+
Sbjct: 191 GE---EVGAIPEGLYPGDYLIPVGEKLAAEHGDRFAAAPESAWLALFRAEAVGAMMDMIR 247

Query: 138 NIILH-GHAYEANNEIIFDTSSIPNYGSFSRRK---IDEQKMGTRVPEKYHKKNPADF-- 191
             +   G     +++I    + +   G  +  +    ++  +   + E    + P D+  
Sbjct: 248 ADLAKLG----IHHDIFSSEAELQAAGKPAAAEKLLREQGLVYDGILEAPKGETPEDWEP 303

Query: 192 ---ILWKRSTPMEPGWESPWGRGRPGW---------HIECSAMSSHYLGKVFDI----HG 235
               L++ +   +   + P  +    W         H + S  +        DI    H 
Sbjct: 304 VELPLFRSTQFGDDQ-DRPIRKSDGSWTYFGADLAYHFQKSETADEL----IDIWGADHA 358

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLE 293
           G +  I      + A +       +     +    L   G   KMSK  GNF+T+ ++++
Sbjct: 359 GTVKRI------KAAVAALTGGKTRFDVKLVQMVRLLKNGEPFKMSKRAGNFVTLADVVD 412

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR------------LTEAEILLSKWPQTS 341
                        +R  ML       +DF   R            L  A   +S+  + +
Sbjct: 413 EVGK-------DAVRFTMLTRKADAQMDFDFARVVEASRDNPVWYLQYANARISRLRRKA 465

Query: 342 TSKGIIDPA 350
              GI+ PA
Sbjct: 466 ADAGIVLPA 474


>gi|320529478|ref|ZP_08030564.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320138272|gb|EFW30168.1| leucyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 849

 Score = 49.9 bits (118), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 69/174 (39%), Gaps = 28/174 (16%)

Query: 230 VFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H          +  +   D  E   N+ +  G +  +G KMSKS G
Sbjct: 556 PVDQYIGGIEHAILHLLYARFFTKVLRDAEMLDFDEPFTNL-LTQGMVIKDGAKMSKSLG 614

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  E+++        + A   RL +L        +D++ Q +  A   LS+  +   
Sbjct: 615 NVVSPEEIIDR-------YGADTARLFILFAAPVERDLDWSDQGVEGAFRFLSRVWRI-- 665

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQ--------ALHKLARESTKNHDLLPIFNAS 388
             G  +  + SA  +  +T  A+          LH   ++ T++     +FN +
Sbjct: 666 -LGQFEETIRSA-SDAYDT-DALSTEETELRRVLHSTVKKVTEDIRDRFMFNTA 716



 Score = 37.1 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 29/179 (16%), Positives = 51/179 (28%), Gaps = 31/179 (17%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            DP+  + YV    P      H+G+ R   + DV+ R          V +          
Sbjct: 53  QDPAKPKYYVLEMFPYPSGNLHMGHVRNYSIGDVVARF--RTMAGYNVLHPMGFDSFGMP 110

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---------THQPRATNHI 129
               A      I  N   +  T  N +   +    +                  R T  I
Sbjct: 111 AENAA------IKNNVHPAAWTYANIENMKRQQRAMGLSYDWDREVVTCREDYYRWTQWI 164

Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
            ++          G AY+    +   DT         +  ++++ K   R   +  K+N
Sbjct: 165 FEL------FYKKGLAYKKEASVNWCDTCGT----VLANEQVEDGKCW-RCKSEVQKRN 212


>gi|301056248|ref|YP_003794459.1| leucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378417|gb|ADK07321.1| leucyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 802

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 57/171 (33%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   DL         H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKDLEKP-----YHQTVKKVTEDYAELRFNTAISQMM 681


>gi|297193195|ref|ZP_06910593.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720465|gb|EDY64373.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 525

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 43/135 (31%), Gaps = 12/135 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     +    +
Sbjct: 13  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANGVTPQ--E 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
               +  +  +   +    L   A     R T   H  ++   +Q++   G  Y+     
Sbjct: 69  WCDKLVEEAWKPLWE---HLNI-ANDDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 124

Query: 151 EIIFDTSSIPNYGSF 165
                       G  
Sbjct: 125 PYCVGCEEYKLPGDL 139


>gi|269120234|ref|YP_003308411.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268614112|gb|ACZ08480.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 638

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G A   I+ DV  R +R    E  V +   + +   KI E A +       N     
Sbjct: 18  PHVGTAYTTIIADVTARYMRLKGYE--VKFSTGLDEHGQKIQEAAEKN------NVTPQE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +  + F     +L     T   R T   H   +  +I+ +  +G  Y+   + ++  
Sbjct: 70  WVDRMAENFKALWKKLNISN-TEFIRTTEERHKISVKKMIKRVYENGDIYKGEYKGLYCV 128

Query: 157 S 157
           S
Sbjct: 129 S 129


>gi|160872510|ref|ZP_02062642.1| isoleucyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121309|gb|EDP46647.1| isoleucyl-tRNA synthetase [Rickettsiella grylli]
          Length = 948

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 15/114 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +      ++  H   ++ +G KMSKS GN I   ++++          A ++RL +
Sbjct: 576 SIAMNSQAPYKSVLTHGFTVDEKGHKMSKSLGNVIAPEKVIQRLG-------ADILRLWI 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
             T YR+ +  + + L        +   T           L A  +D ++   I
Sbjct: 629 SSTDYRKEMVVSDEILKHTVDAYRRIRNTIR--------FLLANLHDFDSTDCI 674


>gi|291556706|emb|CBL33823.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Eubacterium siraeum V10Sc8a]
          Length = 801

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 26/163 (15%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYR 317
           E  A        L  +G KMSKS GN I  N++++        + A V+R   + M  Y 
Sbjct: 564 EPYAKRTAQGLILGPDGEKMSKSRGNVIDPNDVVDV-------YGADVLRVYVLFMGDYE 616

Query: 318 EPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YND-----LNTV 362
           +   +    +   +  L +                 + +++         D      NT 
Sbjct: 617 QAAPWNDSSMKGCKRFLDRVWNLQNMLVRGDEYSDELRTSMHKTIKKVSEDIEKMRFNT- 675

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
            AI A+  L  E T N  +      S  IL +     H+ + +
Sbjct: 676 -AIAAMMSLINEITANGKINDAEMKSLLIL-LNPFAPHITEEM 716


>gi|291531740|emb|CBK97325.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Eubacterium siraeum 70/3]
          Length = 801

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 26/163 (15%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYR 317
           E  A        L  +G KMSKS GN I  N++++        + A V+R   + M  Y 
Sbjct: 564 EPYAKRTAQGLILGPDGEKMSKSRGNVIDPNDVVDV-------YGADVLRVYVLFMGDYE 616

Query: 318 EPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YND-----LNTV 362
           +   +    +   +  L +                 + +++         D      NT 
Sbjct: 617 QAAPWNDSSMKGCKRFLDRVWNLQNMLVRGDEYSDELRTSMHKTIKKVSEDIEKMRFNT- 675

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
            AI A+  L  E T N  +      S  IL +     H+ + +
Sbjct: 676 -AIAAMMSLINEITANGKINDAEMKSLLIL-LNPFAPHITEEM 716


>gi|32812832|emb|CAD67565.1| Bel-2 protein [Simian foamy virus-orangutan]
          Length = 321

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/257 (17%), Positives = 87/257 (33%), Gaps = 51/257 (19%)

Query: 2   KKKIKIYNTLE-----RKITEFQAIDP----------SNIRMYVCGPTVYDFAHIGNARP 46
           +  I++YN L      + +  F  ++           S   ++ CGP  Y   + G+A  
Sbjct: 33  QVTIRLYNNLTVITICQGLDPFVNLNDCGSNLDESDCSEPDVFCCGPLCYKLCYEGHA-- 90

Query: 47  MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
            + FD L   L +  G        N T  D ++++  +   P     D ++    +  + 
Sbjct: 91  -LSFDKLRCWLLHLKGG-HPDGASNFTKNDMRVLQLGKVN-PYGEKGDPMTQYAYQVKR- 146

Query: 107 FVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILH--GHAYEANNEIIFDTSSIPNY 162
                           PRA     +     L+ ++     G  Y          +++  Y
Sbjct: 147 --------GVQTIGLSPRALCVKGLRFQQELLCDLRNPRIGEGYMPKG----YHAALEKY 194

Query: 163 GSFSRRKID-----EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHI 217
           G  +  + +     + K+ T + + Y++    D+ LW+      P W+ P       WH 
Sbjct: 195 GPRNGCREERVLWIDNKLITGLEDYYNETGE-DY-LWRAQQDRTPPWKQP-------WHE 245

Query: 218 ECSAMSSHYLGKVFDIH 234
           E + M         D+ 
Sbjct: 246 EHTGMKLSSFSTPSDVQ 262


>gi|213404928|ref|XP_002173236.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
 gi|212001283|gb|EEB06943.1| leucyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
          Length = 1112

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DL+  H    +         +        NG L + G KMSKS GNF+T++
Sbjct: 692 PFDIRVSGKDLVPNHLTFCLYTHAAIFDEKFWPKGIRANGHLLMNGEKMSKSTGNFMTLH 751

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           E         + + +   R+A+
Sbjct: 752 EAC-------KKYGSDATRVAL 766


>gi|167751178|ref|ZP_02423305.1| hypothetical protein EUBSIR_02164 [Eubacterium siraeum DSM 15702]
 gi|167655893|gb|EDS00023.1| hypothetical protein EUBSIR_02164 [Eubacterium siraeum DSM 15702]
          Length = 801

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 56/163 (34%), Gaps = 26/163 (15%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYR 317
           E  A        L  +G KMSKS GN I  N++++        + A V+R   + M  Y 
Sbjct: 564 EPYAKRTAQGLILGPDGEKMSKSRGNVIDPNDVVDV-------YGADVLRVYVLFMGDYE 616

Query: 318 EPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YND-----LNTV 362
           +   +    +   +  L +                 + +++         D      NT 
Sbjct: 617 QAAPWNDSSMKGCKRFLDRVWNLQNMLVRGDEYSDELRTSMHKTIKKVSEDIEKMRFNT- 675

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
            AI A+  L  E T N  +      S  IL +     H+ + +
Sbjct: 676 -AIAAMMSLINEITANGKINDAEMKSLLIL-LNPFAPHITEEM 716


>gi|332687124|ref|YP_004456898.1| leucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332371133|dbj|BAK22089.1| leucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 804

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 58/182 (31%), Gaps = 41/182 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLYNQGMILGKNNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++E        + A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDDVIE-------KYGADTLRLYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLLV 635

Query: 342 TSKGIIDPAVL----------------------SALYNDLNTVSAIQALHKLARESTKNH 379
           +  G ++  ++                       A++   NT  AI  L     E+ K  
Sbjct: 636 SETGTMNARIIKTNDGQLTKLYNQTVKKVTEDLEAMH--FNT--AISQLMIFVNEANKIA 691

Query: 380 DL 381
           +L
Sbjct: 692 EL 693


>gi|326484075|gb|EGE08085.1| leucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
          Length = 975

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 41/155 (26%), Gaps = 24/155 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  R               D+   +   A     E+ +I      
Sbjct: 92  HMGHVRVYTISDVLARFKRMKGY-----------DVLHPMGWDAFGLPAENAAIERGIHP 140

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI 152
              T +N          L               P+     Q     +   G AY+A   +
Sbjct: 141 EGWTKQNIANMKNQLKDLGI-RFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVV 199

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                         +  ++D      R   K  K+
Sbjct: 200 NYDPVDKT----VLANEQVDSNGCSWRSGAKVEKR 230


>gi|326476475|gb|EGE00485.1| leucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
          Length = 933

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/155 (16%), Positives = 41/155 (26%), Gaps = 24/155 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  R               D+   +   A     E+ +I      
Sbjct: 92  HMGHVRVYTISDVLARFKRMKGY-----------DVLHPMGWDAFGLPAENAAIERGIHP 140

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI 152
              T +N          L               P+     Q     +   G AY+A   +
Sbjct: 141 EGWTKQNIANMKNQLKDLGI-RFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVV 199

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                         +  ++D      R   K  K+
Sbjct: 200 NYDPVDKT----VLANEQVDSNGCSWRSGAKVEKR 230


>gi|238919212|ref|YP_002932727.1| methionyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|238868781|gb|ACR68492.1| methionyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 682

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 34/205 (16%)

Query: 224 SHYLGKVFDI---HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
             Y G+  D    H  G D+++ H     A         K +N+++H G++ + G KMSK
Sbjct: 283 DDYWGQGSDAELYHFIGKDIVYFHSLFWPAMLE-GSGFRKPSNVFVH-GYVTVNGAKMSK 340

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ- 339
           S G FI     L              +R       Y   +     R+ + ++ L  + Q 
Sbjct: 341 SRGTFIQARTYLN-------HLDPDCLRYY-----YTAKL---SDRIDDIDLNLEDFVQR 385

Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                        S + G I       L + L   +  Q     A E  K ++      A
Sbjct: 386 VNADIVNKVVNLASRNAGFITKRFAGQLSDTLADPALYQTFVDAAAEIAKAYEARESGKA 445

Query: 388 SAHILGI-EVCKEHLNKNISIAIEK 411
              I+ + ++   ++++     + K
Sbjct: 446 IREIMALADLANRYVDEQAPWVVAK 470


>gi|154149034|ref|YP_001406307.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153805043|gb|ABS52050.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 638

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D L R  R    E   T+    TD   + IE A ++H       
Sbjct: 12  VNDIPHIGHAYTTIICDTLARFYRLQGYE---TFFLTGTDEHGQKIEEAAKKH-----GT 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +  I     + +F             H  R T+  HI       + +  +G  Y+   E 
Sbjct: 64  SPKIYADAVSAKFRSLWDYFDISY-DHFIRTTDEYHIKTAQNAFEIMFANGDIYKGEYEG 122

Query: 153 IFDTS 157
            +  S
Sbjct: 123 YYCVS 127


>gi|94969057|ref|YP_591105.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
 gi|94551107|gb|ABF41031.1| methionyl-tRNA synthetase [Candidatus Koribacter versatilis
           Ellin345]
          Length = 671

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    +  D + R  R    +   T+    TD         + E  ++    
Sbjct: 15  VNARPHIGHTYTTVACDAIARRKRMLGVD---TFFLTGTD-----EHGQKIERSAMASGK 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
           +      + + +F     R+  L+     R T   HI  +  LI+ +   G+ Y+     
Sbjct: 67  SDQQFVDEVSAEFRGLWDRMG-LSYDKFIRTTDPEHIRGVQALIKRLQDRGYIYKGKYSG 125

Query: 153 IFDT 156
            +  
Sbjct: 126 QYCV 129


>gi|324008367|gb|EGB77586.1| isoleucine--tRNA ligase [Escherichia coli MS 57-2]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAVKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|317969890|ref|ZP_07971280.1| leucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 882

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/165 (16%), Positives = 48/165 (29%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R     K V +              A      I  
Sbjct: 45  PYPSGNLHMGHVRNYVITDVVARVQRLRG--KKVLHPMGWDAFGLPAENAA------IER 96

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T +N         +L       +  AT H        Q      +  G AY+ 
Sbjct: 97  GVDPGAWTDQNIASMRDQLDQLGLSIDWDRELATCH-DDYYRWTQWLFLQFLDGGLAYQK 155

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
           +  + +D          +  ++D +    R      K+    + L
Sbjct: 156 DATVNWDPIDQT---VLANEQVDGEGRSWRSGALVEKRKLRQWFL 197


>gi|148266323|ref|YP_001233029.1| isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|146399823|gb|ABQ28456.1| Isoleucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 924

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 36/208 (17%), Positives = 67/208 (32%), Gaps = 51/208 (24%)

Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW--KRSTPMEPGWESPWGRGRPGWHIEC 219
           Y       + + ++   V + + K + +D  +W  + +  + P          PG   +C
Sbjct: 472 YCKACGEALADGRIMHHVADLFEK-DGSD--IWYDREAGELLP----------PG--TKC 516

Query: 220 SAMSSHYLGKVFDIH------GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
            +       K  DI       G     +  H  N  + +            W H+  L  
Sbjct: 517 PSCGKEEFDKEMDILDVWFDSGVSHAAVLEHRPNLSSPADMYLEGSDQHRGWFHSSLLAS 576

Query: 274 ---------------------EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                                 GRKMSKS GN +   +++       + + A V+RL + 
Sbjct: 577 VGTRGVAPYKSVLTHGFVVDGSGRKMSKSVGNVVAPEDVI-------KKYGAEVLRLWVA 629

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
              YR+ +  + + LT       +   T
Sbjct: 630 AQDYRDDLRISQEILTRLSEAYRRIRNT 657


>gi|306815377|ref|ZP_07449526.1| isoleucyl-tRNA synthetase [Escherichia coli NC101]
 gi|305851039|gb|EFM51494.1| isoleucyl-tRNA synthetase [Escherichia coli NC101]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAVKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|294084713|ref|YP_003551471.1| isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664286|gb|ADE39387.1| Isoleucyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 933

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 15/146 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC          +  H   L+ +GRKMSKS GN IT  +++E          A ++RL 
Sbjct: 589 QSCSTRGKAPYKGVLTHGFVLDEQGRKMSKSLGNVITPQKIMEQNG-------ADILRLW 641

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYN-DLN--TV 362
           ++ + Y   +    + +        ++  T         G  D   +      DL    +
Sbjct: 642 VVSSDYYNDLRIGNEIIQRMTDNYRRFRNTLRYLLGALDGFDDAERVDYADMPDLERWVL 701

Query: 363 SAIQALHKLARESTKNHDLLPIFNAS 388
           + +  +    R+ T+N+D   IF   
Sbjct: 702 NRLAEIDANIRKMTENYDFHGIFTEL 727


>gi|302504425|ref|XP_003014171.1| hypothetical protein ARB_07476 [Arthroderma benhamiae CBS 112371]
 gi|291177739|gb|EFE33531.1| hypothetical protein ARB_07476 [Arthroderma benhamiae CBS 112371]
          Length = 1127

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRISGKDLIQNHLTFFLYVHIALFPREYWPRGVRANGHLLLNGEKMSKSTGNFLTLR 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|302879260|ref|YP_003847824.1| isoleucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582049|gb|ADL56060.1| isoleucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 943

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 62/180 (34%), Gaps = 32/180 (17%)

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RP    E S+ S  YL    D++  G D      ++ +   C  +       +  H   +
Sbjct: 563 RP----ELSSSSDRYLA---DLYLEGSDQHRGWFQSSLLTGCAINGRAPFNALLTHGFVV 615

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           +  G KMSKS GN I   ++ +T         A ++RL    T Y   +  + + L    
Sbjct: 616 DGNGHKMSKSKGNVIAPQKIFDTLG-------ADILRLWTASTDYSGELTISDEILKRVV 668

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
               +   T          +L+ + +               R++    D L I   + H+
Sbjct: 669 ESYRRIRNTL-------KFLLANISD-----------FDATRDALPVSDWLEIDRYALHM 710



 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 63/169 (37%), Gaps = 18/169 (10%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERARQE 86
           GP  Y     HIG+A   I+ D++ +       +           +  I+  + ++  + 
Sbjct: 64  GP-PYANGDIHIGHAVNKILKDIIIKSKTLSGFDAPYVPGWDCHGLP-IELMVEKKHGKA 121

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP-----QMIYLIQNIIL 141
            P     +      ++  ++  KD  RL  L   ++P  T  +       +I  I  I  
Sbjct: 122 IPPAQFRELCRSYAAEQVERQKKDFIRLGVLGDWNRPYLT--MDFKVEADIIRAIGQIHD 179

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPA 189
           +G+ Y+    + +         + +  +++ E K  + +   +  K+PA
Sbjct: 180 NGYLYQGYKPVNWCLDCQS---ALAEAEVEYEDKTSSAIDVAFEVKDPA 225


>gi|237737868|ref|ZP_04568349.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
 gi|229419748|gb|EEO34795.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
          Length = 641

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 57/334 (17%), Positives = 98/334 (29%), Gaps = 77/334 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  R    +    Y    TD         + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVMARYKRTMGYD---AYFLTGTD-----EHGQKVEETAKQKGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T     +F +   +L         R T   H   +  +++ +  +G  Y+     
Sbjct: 66  TPQQWTDIMAPRFKEMWAKLGIEYSDF-IRTTESRHKEAVKKILKKVYENGDIYKGEYSG 124

Query: 153 IFDTS--------------SIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFIL 193
            +  S                P+ G   R   +E              ++  K+P DFIL
Sbjct: 125 KYCVSCETFVPENQIVNGNHCPDCGKELRVVKEESYFFKMSKYQDALLEHIDKHP-DFIL 183

Query: 194 WKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLG 228
            +        +            + +  G P      HI            +A+      
Sbjct: 184 PRSRRNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENNP 243

Query: 229 KVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
           ++FD        +H  G D++  H         C      EK  +  + +G+   EG KM
Sbjct: 244 EMFDKYWNNAEVMHLLGKDIVRFH----AIIWPCMLLSAGEKLPDKVVAHGWWTSEGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           SKS GN +               +     R  ++
Sbjct: 300 SKSKGNVV-------DPISEIEKYGVDAFRYCLM 326


>gi|57241991|ref|ZP_00369931.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017183|gb|EAL53964.1| leucyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 808

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 36/84 (42%), Gaps = 9/84 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  + + +  G +  +G KMSKS GN +  ++++       + + A   RL +L      
Sbjct: 561 EPFSRL-LTQGMVLKDGAKMSKSKGNVVNPDDII-------KKYGADTARLFILFAAPPA 612

Query: 318 EPIDFTVQRLTEAEILLSKWPQTS 341
           + +++    L  A   + +    +
Sbjct: 613 KELEWNDDALEGAYRFIVRLYDRA 636


>gi|317153419|ref|YP_004121467.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943670|gb|ADU62721.1| isoleucyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 942

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 11/95 (11%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN I   E+++        + A ++R+ +  ++Y+E I  + + 
Sbjct: 596 HGYVVDADGRKMSKSIGNVIAPQEIID-------KFGAEILRMWVSASNYQEDIRISDET 648

Query: 327 LTEAEILLSKWPQT----STSKGIIDPAVLSALYN 357
           L        +   T     ++    DPA   A+ +
Sbjct: 649 LNRLVDAYRRIRNTCRYLLSNLNDFDPADRVAVAD 683


>gi|77920049|ref|YP_357864.1| isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
 gi|84029525|sp|Q3A1R3|SYI_PELCD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77546132|gb|ABA89694.1| Isoleucyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
          Length = 927

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 17/122 (13%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G+KMSKS GN +   E++       + + A ++RL +    YR+ I  + + 
Sbjct: 592 HGFVVDGKGKKMSKSVGNVVAPEEVI-------KKYGAEILRLWVAAQDYRDDIRISNEI 644

Query: 327 LTEAEILLSKWPQTST----SKGIIDPAVLSALYND----LNTVSAIQALHKLARESTKN 378
           L        +   T+     +    DP+    + +D    L+   A+  L  LA    K 
Sbjct: 645 LQRLSDAYRRIRNTARYILGNLSGFDPS-RDMVADDQLLELDRW-ALAKLEDLAGRVEKA 702

Query: 379 HD 380
           ++
Sbjct: 703 YE 704


>gi|71891905|ref|YP_277635.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|84029508|sp|Q493S3|SYI_BLOPB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71796011|gb|AAZ40762.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 942

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN I+  E++       + + A ++RL 
Sbjct: 579 ISTVITGQAPYREVLTHGFTVDAQGRKMSKSLGNVISPQEII-------KDFGADILRLW 631

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  + Y + +  +   L     +  +   T+ 
Sbjct: 632 IASSDYSKEMAISNAILKHTIDVYRRIRNTAR 663


>gi|332704041|ref|ZP_08424129.1| Isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554190|gb|EGJ51234.1| Isoleucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 939

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 53/129 (41%), Gaps = 19/129 (14%)

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RP    EC+  +  YL    D H G        H + +A S          ++  H   +
Sbjct: 555 RP----ECTFPADLYLEGT-DQHRGWF------HSSLLA-SIGTRARPPYKSVLTHGYVV 602

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           + EGRKMSKS GN +   E+++        + A V+RL +   +Y+E +  + + L    
Sbjct: 603 DGEGRKMSKSLGNVVAPQEIID-------KYGAEVLRLWVSAVNYQEDVRISSEILDRLV 655

Query: 332 ILLSKWPQT 340
               +   T
Sbjct: 656 DAYRRIRNT 664


>gi|302655409|ref|XP_003019493.1| hypothetical protein TRV_06472 [Trichophyton verrucosum HKI 0517]
 gi|291183221|gb|EFE38848.1| hypothetical protein TRV_06472 [Trichophyton verrucosum HKI 0517]
          Length = 1127

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRISGKDLIQNHLTFFLYVHIALFPREYWPRGVRANGHLLLNGEKMSKSTGNFLTLR 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|167042222|gb|ABZ06954.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_ANIW93I24]
          Length = 951

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 24/123 (19%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +                + NG + ++G+KMSKS GN I + + +   
Sbjct: 578 SGRDLVPNHLTFFVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGNIIPLRDAV--- 634

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
               R + A  IRL +L          + + L +A+  +                 L+++
Sbjct: 635 ----RKYGADPIRLTIL---------ISAELLQDADFNVEAIKGIKNK--------LASM 673

Query: 356 YND 358
           Y D
Sbjct: 674 YED 676



 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          P      HIG+ R   + DV  R LR     
Sbjct: 39 PYPNSPQHIGHGRTYTITDVYSRYLRMKGFN 69


>gi|319943191|ref|ZP_08017474.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743733|gb|EFV96137.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 887

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 54/194 (27%), Gaps = 28/194 (14%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + Y C    Y     H+G+ R   + DV+YR LR       +          D     A 
Sbjct: 37  KFYACSMLPYPSGILHMGHVRNYTINDVMYRHLRMSGYNVLMPMGW------DAFGLPA- 89

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NII 140
            E+ ++    A +  T  N     +    L  L+           P      Q     + 
Sbjct: 90  -ENAALKNGVAPAKWTWDNIAYMKQQMQPLG-LSIDWSREVATCSPDYYKWNQWLFLRMR 147

Query: 141 LHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA------DFI- 192
             G AY  +  +              +  ++ + K          +  P       D+  
Sbjct: 148 EKGIAYRKHGTVNWDPVDQT----VLANEQVVDGKGWRSGAPVEKRDIPMYYLRITDYAG 203

Query: 193 -LWKRSTPMEPGWE 205
            L K  T    GW 
Sbjct: 204 ELLKEVTEHLEGWP 217


>gi|317050747|ref|YP_004111863.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316945831|gb|ADU65307.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 629

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV  R  R    +     V  +T  D+      + E  +    +
Sbjct: 14  VNDVPHIGHAYTTVACDVAARFQRLMGRD-----VMFLTGTDEH---GMKIEQAARKNGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM--IYLIQNIILHGHAY--EANN 150
               + ++  ++F +  T L         R T    +M    L + +   G  Y  E   
Sbjct: 66  TPIELANRVVKRFQELWTTLDISHDDF-IRTTEKRHEMGVHKLFRQLREQGDIYLGEYEG 124

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 125 WYCTPCESF 133


>gi|219113979|ref|XP_002176172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402885|gb|EEC42852.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 657

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            L+      +  LV+ER      + F++AD IR +LE++
Sbjct: 432 ELSDEEVAIVTSLVEERDQAKGKRDFATADEIRDELEAR 470



 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 9/53 (16%)

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESK-GFILEDYKNPDNGQRMTRWK 458
             +  L+  RL   K  +F  AD IR  L    G  +          R   W+
Sbjct: 111 ETVNSLIAARLQARKTGQFEEADGIRDDLLKIHGVSV--------WDREKTWR 155



 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 42/138 (30%), Gaps = 15/138 (10%)

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           + +    A+   S      T    +   +   L ND N       +    R+ +   D  
Sbjct: 281 SDRNRPYAQSEYSDGEAKQTRNYRVADDIRDELKNDFNVF-----IEDRLRQWSVGGDFG 335

Query: 383 PI---FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
           P    F+       I    + +       I   +++R    K + F +AD IR  L    
Sbjct: 336 PDQPGFDDMNRSYTISAHSQPVTPADEALIITELEKRSEAKKSRDFETADAIRDNL---- 391

Query: 440 FILEDYKNPDNGQRMTRW 457
               D  N     R+  W
Sbjct: 392 ---MDNFNVAVNDRLREW 406



 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              I  L+ ERL     ++F  AD +++QL S G  + D +
Sbjct: 213 EDEIHALLAERLQYKMSRQFQDADRVQEQLLSNGVYVHDAR 253



 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAH--ILG-IEVCKEHLNKNISIAIEKLVQ 414
           D  T   I+   + AR S K  D    +   +   +   +       +++  + I+K + 
Sbjct: 456 DFATADEIRDELE-ARFSVKVDDRSREWRVMSDDYVFSPLAGGDHGFDEDTIVYIQKQLA 514

Query: 415 ERLILLKMKKFSSADYIRKQLES 437
            RL+    + + +AD +R +L  
Sbjct: 515 SRLVHKTNRDYEAADEVRDELRD 537


>gi|154174333|ref|YP_001408523.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|189082988|sp|A7GZ81|SYL_CAMC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112803061|gb|EAU00405.1| leucyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 821

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 60/143 (41%), Gaps = 17/143 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  +N+ +  G +  +G+KMSKS GN +  ++++         + A   RL +L     +
Sbjct: 572 EPFSNL-LTQGMVLKDGKKMSKSKGNVVDPDDIINR-------YGADTARLFILFAAPPQ 623

Query: 318 EPIDFTVQRLTEAEILLSKW---PQTSTSKGIIDPAVLSALYND-----LNTVSAIQALH 369
           + +++    +  A   L++     +T     I+     + L  D     +    A++  +
Sbjct: 624 KELEWNDSAVEGAYRFLNRLWDKAKTIKKSEILPAIEHANLNKDEKYARMKVYEALKKSN 683

Query: 370 KLARESTKNHDLLPIFNASAHIL 392
           ++  E+   + L+     + + L
Sbjct: 684 EVFNETFAFNTLIAACMEALNAL 706


>gi|91773875|ref|YP_566567.1| methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121691622|sp|Q12UQ9|SYM_METBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91712890|gb|ABE52817.1| Methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 684

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 46/128 (35%), Gaps = 24/128 (18%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AH+G+ R  +  D+  R L+    E  VT+V         I+  A +   
Sbjct: 13  TCGLPYANGKAHVGHLRTYVPADIFTRSLKKTGQE--VTFVCGSDTHGTPIVFNAEE--- 67

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATNHIPQMIYLIQNII 140
              +    + I     + F +   ++  +         PT+  R T        ++  +I
Sbjct: 68  ---LKTTPTEIIKVYHKHFDEIFKKMGVMLDAFGTTDDPTNHNRTTE-------IVSKLI 117

Query: 141 LHGHAYEA 148
            +G+ Y  
Sbjct: 118 ENGYVYPK 125


>gi|284006374|emb|CBA71610.1| isoleucyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 922

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 41/106 (38%), Gaps = 11/106 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN I+  +++           A ++RL +
Sbjct: 562 STAMKGKAPYREVLTHGFTVDGQGRKMSKSLGNTISPQDVMNDLG-------ADILRLWV 614

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLS 353
             T Y   I  + + L  +     +   T+     +    DPA+  
Sbjct: 615 ASTDYTSEIAVSSEILKRSADSYRRIRNTARFLLANLNGFDPALHQ 660


>gi|84683484|ref|ZP_01011387.1| isoleucyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
 gi|84668227|gb|EAQ14694.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
          Length = 996

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 51/153 (33%), Gaps = 23/153 (15%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN I   ++        + + A ++RL 
Sbjct: 649 QACGTKGRAPYRGVLTHGFTLDEKGMKMSKSLGNTIAPEDV-------TKQYGADILRLW 701

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYNDLNTVSA- 364
           +  + Y   +    + L        +   T         G  D   +    +  +     
Sbjct: 702 VAQSDYTADLRIGQEILKGTADSYRRLRNTMRFILGNLAGFSDEEKV----DVADMPELE 757

Query: 365 ------IQALHKLARESTKNHDLLPIFNASAHI 391
                 I  L ++ R+   ++D   +F    + 
Sbjct: 758 RWVLHRIAELDEIVRQGFADYDFQGLFQQVFNF 790


>gi|315053913|ref|XP_003176331.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311338177|gb|EFQ97379.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 1127

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 713 PLDVRISGKDLIQNHLTFFLYVHIALFPREYWPRGVRANGHLLLNGEKMSKSTGNFLTLR 772

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 773 DAVD-------KYGADATRIAF 787


>gi|94987493|ref|YP_595426.1| isoleucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082128|sp|Q1MPH2|SYI_LAWIP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|94731742|emb|CAJ55105.1| Isoleucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 937

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S     +     +  H   ++ +GRKMSKS GN  
Sbjct: 557 LGFPADLYLEGSDQHRGWFHSSLLISIGTRGVPPYHAVLTHGYVVDGDGRKMSKSMGNVT 616

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  E++         +   ++RL +    YRE +  + + L        +   T
Sbjct: 617 SPQEIIS-------KFGVEILRLWVSSVDYREDVRISNEILQRLVDAYRRIRNT 663


>gi|313678677|ref|YP_004056417.1| isoleucine--tRNA ligase [Mycoplasma bovis PG45]
 gi|312950455|gb|ADR25050.1| isoleucine--tRNA ligase [Mycoplasma bovis PG45]
          Length = 892

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 46/121 (38%), Gaps = 7/121 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           +      L   +D++  G D       + +  S           I  H   L+ +G KMS
Sbjct: 536 AVEIDKNLKPPYDLYLEGSDQYRGWFNSSLINSVAYTHKSPYKQIVSHGFVLDSKGEKMS 595

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN +   +++       + + A ++RL +    Y   ++ + + + +   +  K   
Sbjct: 596 KSKGNVVDPLKVI-------KKYGADILRLWVANAEYTNDVNISDEIINQNSEIYRKIRN 648

Query: 340 T 340
           T
Sbjct: 649 T 649


>gi|208435427|ref|YP_002267093.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208433356|gb|ACI28227.1| leucyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 806

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 16/126 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +            E    + I  G +   G KM
Sbjct: 516 KYF-MPVDTYIGGIEHAILHLLYARFFTKALRDLGYIHLDEPFKQL-ITQGMVLKNGTKM 573

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN ++  E+L       + + A   RL +L      + +++    L  A   + + 
Sbjct: 574 SKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDSALEGAHRFIKRL 626

Query: 338 PQTSTS 343
              + +
Sbjct: 627 YDKANA 632



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|116070546|ref|ZP_01467815.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
 gi|116065951|gb|EAU71708.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
          Length = 884

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 13/127 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R       V +              A      I  
Sbjct: 69  PYPSGSLHMGHVRNYVITDVIARVQRMRG--DSVLHPMGWDAFGLPAENAA------IER 120

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
           N      T +N  Q      RL       + +AT H        Q     +   G AY  
Sbjct: 121 NIDPGEWTDRNIDQMRDQLDRLGLSIDWDREQATCH-SDYYRWTQWLFLELFDGGLAYRK 179

Query: 149 NNEIIFD 155
           N  + +D
Sbjct: 180 NATVNWD 186


>gi|121613183|ref|YP_001000850.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|166232774|sp|A1W0F9|SYR_CAMJJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|87249269|gb|EAQ72230.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 530

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 129/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +   +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QVKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFH 485


>gi|326803842|ref|YP_004321660.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650187|gb|AEA00370.1| valine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 881

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 13/177 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E ++    Y     D    G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEEASDYKRYF--PTDTLVTGYDIIFFWVSRMIFQSLEFTGERPFKNVLIHGLIRDS 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN +   ++++        + A  +R  +       + I +  ++L  A  
Sbjct: 521 QGRKMSKSLGNGVDPMDVVD-------QYGADALRWFLATGSTPGQDIRYYPEKLEAAWN 573

Query: 333 LLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
            ++K W  +  +   +D         DLN V++I     L R +     +   F+A 
Sbjct: 574 FINKIWNASRYALMNLDGMTYD--DIDLNNVTSIVDQWILTRLNETIAKVTDRFDAF 628


>gi|323939755|gb|EGB35957.1| isoleucyl-tRNA synthetase [Escherichia coli E482]
          Length = 921

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 559 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 611

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 612 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 665

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 666 VLDRWAVGCAKAAQEDILKAYEA 688


>gi|322497525|emb|CBZ32599.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 1075

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 25/143 (17%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG + ++  KM+KS GNF
Sbjct: 682 PVDLRCSGKDLIQNHLTMFLYNHAAIW--PTDESKWPRAIFCNGHIQVDNEKMAKSRGNF 739

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR-----------LTEAEIL 333
           I++ E ++        + A   RL         +  +F  +            L +A+  
Sbjct: 740 ISLREAMDM-------YGADATRLTCADAGDSMDDANFVRETAAGFVLKMTTLLEQAKET 792

Query: 334 LSKWPQTSTSKGIIDPAVLSALY 356
           + +    S      D    + + 
Sbjct: 793 VERTDLRSGGYNEFDKIFNNTMN 815


>gi|146080950|ref|XP_001464129.1| leucyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134068219|emb|CAM66505.1| putative leucyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 1075

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 25/143 (17%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG + ++  KM+KS GNF
Sbjct: 682 PVDLRCSGKDLIQNHLTMFLYNHAAIW--PTDESKWPRAIFCNGHIQVDNEKMAKSRGNF 739

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR-----------LTEAEIL 333
           I++ E ++        + A   RL         +  +F  +            L +A+  
Sbjct: 740 ISLREAMDM-------YGADATRLTCADAGDSMDDANFVRETAAGFVLKMTTLLEQAKET 792

Query: 334 LSKWPQTSTSKGIIDPAVLSALY 356
           + +    S      D    + + 
Sbjct: 793 VERTDLRSGGYNEFDKIFNNTMN 815


>gi|119386320|ref|YP_917375.1| isoleucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119376915|gb|ABL71679.1| Isoleucyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 987

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 43/109 (39%), Gaps = 7/109 (6%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D      ++ + Q+C         N+  H   L+ +G KMSKS GN I   E+
Sbjct: 619 DVYLEGTDQHRGWFQSSLLQACATKGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPAEV 678

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +       + + A ++RL +  T Y        + L        +   T
Sbjct: 679 I-------KQYGADILRLWVAQTDYTADQRIGPEILKGTADSYRRLRNT 720


>gi|326387756|ref|ZP_08209362.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326207802|gb|EGD58613.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 541

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  DV+ R +R    +  +      T  D+  ++ A++      +      
Sbjct: 29  PHIGHAYEAIAADVIVRFMRAMGRDARLQ-----TGTDEHGLKMAQKAR---DLGLTAKE 80

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  + +Q F      L         R T   H      L + +  +G  Y    E  +  
Sbjct: 81  LADQMSQYFKDMCAALNVGY-DVFIRTTEDRHHEASQELWRRMKANGDLYLDRYEGWYSI 139

Query: 157 SSIPNY 162
                Y
Sbjct: 140 RDEAYY 145


>gi|305431795|ref|ZP_07400962.1| arginine--tRNA ligase [Campylobacter coli JV20]
 gi|304444879|gb|EFM37525.1| arginine--tRNA ligase [Campylobacter coli JV20]
          Length = 530

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFH 485


>gi|114776564|ref|ZP_01451609.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114553394|gb|EAU55792.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 512

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 10/99 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H          AD       ++ H G+  +EG KMSKS GN +   +L
Sbjct: 255 DVHLIGKDILRFHAIYWPCMLMAADLPLP-QRLFAH-GWWTVEGEKMSKSKGNALRPADL 312

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           LE        + A VIR  +L    + +  DF+   + +
Sbjct: 313 LE-------QYDADVIRYFLLREVPFGQDGDFSFSAMKQ 344


>gi|293392921|ref|ZP_06637238.1| isoleucine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291424455|gb|EFE97667.1| isoleucine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 60/168 (35%), Gaps = 30/168 (17%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 ISTAMKGKAPYKEVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   I  + + L  A     +   T+     +    DP+       D      + 
Sbjct: 629 VASTDYTGEIAVSDEILKRAADSYRRIRNTARFLLANLNGFDPSR------DCVAPDEMV 682

Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
            L + A           +  A A  L IE  + + N +    +++L+Q
Sbjct: 683 VLDRWA-----------VGRAQAAQLDIE--QAYANYDFHEVVQRLMQ 717


>gi|255021603|ref|ZP_05293646.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254968991|gb|EET26510.1| Isoleucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 937

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 25/142 (17%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +        +  H   ++ EGRKMSKS GN I   ++++        + A ++RL +
Sbjct: 580 SVASRGRAPYRAVLTHGFTVDAEGRKMSKSLGNVIAPQQIIDR-------YGADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
               YR  I  +   L        +   T+          +    +D  T S        
Sbjct: 633 ASEDYRGEIPISDDILARLGDSYRRIRNTAR--------FILGNNHDF-TPS-------- 675

Query: 372 ARESTKNHDLLPIFNASAHILG 393
            R++    +LL +       LG
Sbjct: 676 -RDTLAPSELLEMDRWMLARLG 696


>gi|148643232|ref|YP_001273745.1| leucyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222445463|ref|ZP_03607978.1| hypothetical protein METSMIALI_01102 [Methanobrevibacter smithii
           DSM 2375]
 gi|148552249|gb|ABQ87377.1| leucyl-tRNA synthetase, LeuS [Methanobrevibacter smithii ATCC
           35061]
 gi|222435028|gb|EEE42193.1| hypothetical protein METSMIALI_01102 [Methanobrevibacter smithii
           DSM 2375]
          Length = 951

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DL+  H    +         EK     +  G   LEG KMS S GN I + 
Sbjct: 572 PLDWRLSAKDLVGNHLSFLMFHHSAIYPKEKWPRGTVVFGMGLLEGNKMSSSKGNVILLK 631

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +E        + A V+RL ++ +   + +  D+  + +   +  L  + + +     +
Sbjct: 632 DAIE-------QYSADVVRLFLMASAEPW-QDFDWREKEVLGTKRRLEWFREFAAKVEEV 683

Query: 348 DPAVLS 353
             + L 
Sbjct: 684 KNSPLD 689


>gi|187930051|ref|YP_001900538.1| leucyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|238691821|sp|B2UCA1|SYL_RALPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187726941|gb|ACD28106.1| leucyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 877

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTGTVNWD 165


>gi|68475214|ref|XP_718325.1| potential cytosolic leucyl tRNA synthetase fragment [Candida
           albicans SC5314]
 gi|68475413|ref|XP_718229.1| potential cytosolic leucyl tRNA synthetase fragment [Candida
           albicans SC5314]
 gi|46439987|gb|EAK99298.1| potential cytosolic leucyl tRNA synthetase fragment [Candida
           albicans SC5314]
 gi|46440087|gb|EAK99397.1| potential cytosolic leucyl tRNA synthetase fragment [Candida
           albicans SC5314]
          Length = 936

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 47/144 (32%), Gaps = 25/144 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG L L   KMSKS GNF+T+ 
Sbjct: 684 PLDVRVSGKDLIPNHLTFFIYTHVALFPKRFWPRGVRANGHLLLNNAKMSKSTGNFMTLE 743

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWP-------- 338
           +++E        + A   R+AM      + +   +F       A + L+           
Sbjct: 744 QIIE-------KFGADASRIAMADAG--DTVEDANFDEANANAAILRLTTLKDWCEEEVK 794

Query: 339 -----QTSTSKGIIDPAVLSALYN 357
                +        D A  + + +
Sbjct: 795 NQDKLRIGDYDSFFDAAFENEMND 818


>gi|261349975|ref|ZP_05975392.1| leucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860758|gb|EFC93056.1| leucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 951

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DL+  H    +         EK     +  G   LEG KMS S GN I + 
Sbjct: 572 PLDWRLSAKDLVGNHLSFLMFHHSAIYPKEKWPRGTVVFGMGLLEGNKMSSSKGNVILLK 631

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +E        + A V+RL ++ +   + +  D+  + +   +  L  + + +     +
Sbjct: 632 DAIE-------QYSADVVRLFLMASAEPW-QDFDWREKEVLGTKRRLEWFREFAAKVEEV 683

Query: 348 DPAVLS 353
             + L 
Sbjct: 684 KNSPLD 689


>gi|15787610|gb|AAL06177.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 40

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R      K F  AD IR++L  +   L D        + T W++
Sbjct: 1   RKRAKAQKDFLKADSIREELLKQKIALMDT------PQGTIWEK 38


>gi|22299641|ref|NP_682888.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|29337024|sp|Q8DH61|SYL_THEEB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22295825|dbj|BAC09650.1| leucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 857

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 42/140 (30%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP   + Y      Y     H+G+ R   + DV+ R  R       V +           
Sbjct: 29  DPQKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARCRRMQGY--RVLHPMGWDAFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      I       + T +N  Q  ++  RL  L+   +   T   P      Q  
Sbjct: 87  ENAA------IERGIHPRVWTQQNIGQMRQELQRLG-LSYDWEREVTTCHPDYYRWTQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
                  G AY+    + +D
Sbjct: 140 FLEFFEAGLAYQKEAAVNWD 159


>gi|84997031|ref|XP_953237.1| leucyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65304233|emb|CAI76612.1| leucyl-tRNA synthetase, putative [Theileria annulata]
          Length = 1176

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 13/114 (11%)

Query: 235 GGGLDLIFPHHENEIAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
             G DL+F H    +       D  E     +  NG + +   KMSKS GNF+TI E + 
Sbjct: 716 CSGKDLLFNHLTMSLFIHDAIWDSDEYMPRSYFCNGHVLVNSEKMSKSKGNFLTIEESIN 775

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSK 344
                   + A   R+A+      + +D   F+      + + L  + QT+   
Sbjct: 776 -------QYTADGTRIALADAG--DTLDDANFSKDTAESSILKLYNFLQTTIQD 820


>gi|34763705|ref|ZP_00144628.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27886533|gb|EAA23774.1| Isoleucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 933

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVSPADVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNIVKQMSEAYRRIRNTAR 664


>gi|257469006|ref|ZP_05633100.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317063253|ref|ZP_07927738.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313688929|gb|EFS25764.1| isoleucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 933

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +        I  H GF+N  EG+KMSKS GN +  ++++       + + A ++RL 
Sbjct: 578 SIGSTHDAPFKKILTH-GFVNDGEGKKMSKSVGNTVVPSDVI-------KLYGADILRLW 629

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YRE +  +   L +      +   T+ 
Sbjct: 630 CASVDYREDVKISDNILKQMAEAYRRVRNTAR 661


>gi|223040686|ref|ZP_03610955.1| isoleucyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878050|gb|EEF13162.1| isoleucyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 918

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC A       ++  H   ++  G+KMSKS GN +    +        +++   ++RL +
Sbjct: 585 SCAAQGRAPYRSVLTHGFTVDENGQKMSKSKGNVVAPANV-------AKTYGVEILRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++ Y   +  +   L +      K   T
Sbjct: 638 ALSDYSSDLKISENILKQVSEQYRKIRNT 666


>gi|255070991|ref|XP_002507577.1| predicted protein [Micromonas sp. RCC299]
 gi|226522852|gb|ACO68835.1| predicted protein [Micromonas sp. RCC299]
          Length = 509

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 51/146 (34%), Gaps = 19/146 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+     V DV  RL R    +        +T  D+  ++    E  +     
Sbjct: 8   VNDKPHIGHVYTSTVADVYARLQRNMGKDVFF-----LTGTDEHGLK---VEQSAEKRGI 59

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA---- 148
               +  +N+  F +    +     T   R T+  H  Q+  L++ ++  G  Y      
Sbjct: 60  GTQQLADENSALFREVMDDMNISY-TSFIRTTDTSHQVQVQRLVEILLQKGFIYLGKFEG 118

Query: 149 ---NNEIIFDTSSIPNYGSF-SRRKI 170
                +  + T+    Y S  S + +
Sbjct: 119 WYDEGQEEYYTAKEIGYKSLISGKDL 144


>gi|20092839|ref|NP_618914.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|25009364|sp|Q8TIU5|SYM_METAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19918142|gb|AAM07394.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 712

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 9/88 (10%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  +  D+  R LR     + VT+V         I+  A +   
Sbjct: 16  TCGLPYANGKAHIGHLRTYVPADIFARSLRKEG--REVTFVCGSDTHGTPIVVNAEE--- 70

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLAC 116
              +      +     + F +   +L  
Sbjct: 71  ---LGITPKELVEIYHKHFDETFKQLGV 95



 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 69/197 (35%), Gaps = 47/197 (23%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+ + H     A    AD    TA   + +G + +E +K SK+ G  + + E  
Sbjct: 292 VHFIGGDITYHHCIFWPAMLNGADYSVPTAV--VASGMVKIEDKKFSKTRGYVVWVGE-- 347

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
               +    +   ++R  +   T + + ++F+ + L E                 I+  +
Sbjct: 348 ---DYLDHGFHPDLLRYYLASYTSHTKELNFSWRVLQE----------------KINAEL 388

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++ L N L                     +L  F     +      +  L   +S  IE+
Sbjct: 389 VAVLGNFL------------------YRTMLFAFKNYGEV-----PEGKLEPEVSAEIEE 425

Query: 412 LVQERLILLKMKKFSSA 428
            ++E    +   +F  A
Sbjct: 426 ALKEVKEAMAEYEFKKA 442


>gi|86153085|ref|ZP_01071290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843970|gb|EAQ61180.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 530

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKTDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAILNDAFEARALQKIPDYLKNLAANFH 485


>gi|333011407|gb|EGK30821.1| isoleucyl-tRNA synthetase [Shigella flexneri K-272]
 gi|333021646|gb|EGK40895.1| isoleucyl-tRNA synthetase [Shigella flexneri K-227]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|323166071|gb|EFZ51850.1| isoleucyl-tRNA synthetase [Shigella sonnei 53G]
          Length = 860

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 498 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 550

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 551 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 604

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 605 VLDRWAVGCAKAAQEDILKAYEA 627


>gi|297517214|ref|ZP_06935600.1| isoleucyl-tRNA synthetase [Escherichia coli OP50]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|284919807|emb|CBG32862.1| isoleucyl-tRNA synthetase [Escherichia coli 042]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|256025343|ref|ZP_05439208.1| isoleucyl-tRNA synthetase [Escherichia sp. 4_1_40B]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|171920487|ref|ZP_02931504.2| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|171902953|gb|EDT49242.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
          Length = 521

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DVL R  R +  +        +T +D+      + +  +   N +   
Sbjct: 20  PHIGHAYTTIIADVLARYKRLFGYDVFF-----LTGMDEH---GQKIQQKAFEENISPKA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F+    RL   + +   R T  +H   +  +   +   G  Y       +  
Sbjct: 72  LVDRNSIIFLNLWKRLNI-SFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYYCV 130

Query: 157 SSIPNY 162
           S   NY
Sbjct: 131 SCEENY 136


>gi|13357755|ref|NP_078029.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170761906|ref|YP_001752278.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|183508737|ref|ZP_02958215.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701992|ref|ZP_02971615.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|25009406|sp|Q9PQU6|SYM_UREPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|11356980|pir||C82922 methionyl-tRNA synthetase UU197 [imported] - Ureaplasma urealyticum
 gi|6899162|gb|AAF30604.1|AE002119_9 methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827483|gb|ACA32745.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|182675666|gb|EDT87571.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700768|gb|EDU19050.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 521

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DVL R  R +  +        +T +D+      + +  +   N +   
Sbjct: 20  PHIGHAYTTIIADVLARYKRLFGYDVFF-----LTGMDEH---GQKIQQKAFEENISPKA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F+    RL   + +   R T  +H   +  +   +   G  Y       +  
Sbjct: 72  LVDRNSIIFLNLWKRLNI-SFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYYCV 130

Query: 157 SSIPNY 162
           S   NY
Sbjct: 131 SCEENY 136


>gi|293417901|ref|ZP_06660523.1| isoleucyl-tRNA synthetase [Escherichia coli B185]
 gi|291430619|gb|EFF03617.1| isoleucyl-tRNA synthetase [Escherichia coli B185]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|317052384|ref|YP_004113500.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316947468|gb|ADU66944.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 556

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 62/317 (19%), Positives = 102/317 (32%), Gaps = 44/317 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   V D + R+L Y        Y  N  D  +++       +     
Sbjct: 132 PT--GPLHIGHGRGAAVGDAIARILEYAGYNVHREYYIN--DAGNQMNNLGLSTYIRYMQ 187

Query: 93  NDAISIIT---SKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHA 145
                 +T   S     ++ D  R   L  T   R        IP    L  ++IL G  
Sbjct: 188 LLGHEEMTLEESCYQGDYITDIAR-DVL--TKYGRKFEGDRSSIPFFTTLTGDVILQG-- 242

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK---YHKKNPADFILWKRSTPMEP 202
               +++     S  +Y  FS + + EQ   +R  ++     K       LW R+T    
Sbjct: 243 --IKDDLQRFRVSFDHY--FSEKDLHEQGHVSRELDQLQTAGKAYEEGDALWVRTTAFGD 298

Query: 203 GWE--SPWGRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHH--ENEIAQSCCAD 256
             +     G G   +     A   +   + FD  I   G D    HH   N +  +    
Sbjct: 299 DKDRVVRRGNGETTYFAADIAYHRNKFQRGFDTLIDIWGAD----HHGYVNRLKAAVNLL 354

Query: 257 RIEKTANIWIHNGFLNLEGR----KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                    I    ++L+       MS  +G F  + ++L+              R   L
Sbjct: 355 DRNPDDLEVILIQLVSLQRAGVPVAMSTRSGEFDALRDVLDEVGT-------DAARYFFL 407

Query: 313 MTHYREPIDFTVQRLTE 329
           M      +DF ++   +
Sbjct: 408 MRRCDSHLDFDLELAKQ 424


>gi|253774942|ref|YP_003037773.1| isoleucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254160152|ref|YP_003043260.1| isoleucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|300928679|ref|ZP_07144198.1| isoleucine--tRNA ligase [Escherichia coli MS 187-1]
 gi|242375866|emb|CAQ30546.1| isoleucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253325986|gb|ACT30588.1| isoleucyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253972053|gb|ACT37724.1| isoleucyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253976262|gb|ACT41932.1| isoleucyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|300463348|gb|EFK26841.1| isoleucine--tRNA ligase [Escherichia coli MS 187-1]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|30061594|ref|NP_835765.1| isoleucyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|30039836|gb|AAP15570.1| isoleucine tRNA synthetase [Shigella flexneri 2a str. 2457T]
 gi|313646599|gb|EFS11060.1| isoleucyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|332295717|ref|YP_004437640.1| leucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178820|gb|AEE14509.1| leucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 826

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 45/102 (44%), Gaps = 9/102 (8%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  +N+ +  G +  +G KMSKS GN +   E++ T       + A   RL +L      
Sbjct: 567 EPFSNL-LTQGMVLKDGEKMSKSKGNIVDPEEIIST-------YGADTARLFILFAAPPE 618

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL 359
           + ++++ Q +  A   L++  +           V +++  DL
Sbjct: 619 KDLEWSDQGVEGAHRFLARIWKLFNENLERIKNVEASVEEDL 660



 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 11/107 (10%)

Query: 13  RKITEFQAIDP-SNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           R+   F+  D   N +MY+    P      H+G+ R   + DV+ R  R       V + 
Sbjct: 18  REKRAFKTDDEKGNKKMYILEMFPYPSGNLHMGHVRNYTIGDVVARYYRMKSYN--VLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
                        A      I         T KN +   +    L  
Sbjct: 76  MGWDAFGMPAENAA------IKYGVHPYEWTIKNIENMKRQLNSLGI 116


>gi|327401646|ref|YP_004342485.1| methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327317154|gb|AEA47770.1| Methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 665

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 57/175 (32%), Gaps = 30/175 (17%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  +  DV  R L+     + V ++         I+  A +E  
Sbjct: 9   TCGLPYANGKAHIGHLRTYVPADVYVRYLKMLG--EDVIFICGSDCHGTPIVVNAEKE-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL-----APTHQPRATNHIPQMIYLIQNIILHG 143
                 +   +  +    F K    +            +    +HI      ++ +I +G
Sbjct: 65  ----GISPRELVDRYHDHFQKVFKAIDIEFDFFGRTDSEY---HHIRTQ-EFVKKLIENG 116

Query: 144 H--------AY-EANNEIIFD--TSSIPNY-GSFSRRKIDEQKMGTRVPEKYHKK 186
           +        AY       + D     I  Y GS +R    +Q  G  +     K+
Sbjct: 117 YIFPKEIELAYCPKCQRFLPDRYVEGICPYCGSVARGDECDQGCGRHLEPGEIKE 171


>gi|323945763|gb|EGB41810.1| isoleucyl-tRNA synthetase [Escherichia coli H120]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|300924028|ref|ZP_07140028.1| isoleucine--tRNA ligase [Escherichia coli MS 182-1]
 gi|300419752|gb|EFK03063.1| isoleucine--tRNA ligase [Escherichia coli MS 182-1]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|188492266|ref|ZP_02999536.1| isoleucyl-tRNA synthetase [Escherichia coli 53638]
 gi|194439692|ref|ZP_03071762.1| isoleucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|188487465|gb|EDU62568.1| isoleucyl-tRNA synthetase [Escherichia coli 53638]
 gi|194421377|gb|EDX37394.1| isoleucyl-tRNA synthetase [Escherichia coli 101-1]
 gi|323959973|gb|EGB55619.1| isoleucyl-tRNA synthetase [Escherichia coli H489]
          Length = 938

 Score = 49.5 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|324012345|gb|EGB81564.1| isoleucine--tRNA ligase [Escherichia coli MS 60-1]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|323964878|gb|EGB60345.1| isoleucyl-tRNA synthetase [Escherichia coli M863]
 gi|323975807|gb|EGB70903.1| isoleucyl-tRNA synthetase [Escherichia coli TW10509]
 gi|324112587|gb|EGC06564.1| isoleucyl-tRNA synthetase [Escherichia fergusonii B253]
 gi|327254999|gb|EGE66602.1| isoleucyl-tRNA synthetase [Escherichia coli STEC_7v]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|320179583|gb|EFW54532.1| Isoleucyl-tRNA synthetase [Shigella boydii ATCC 9905]
 gi|332095311|gb|EGJ00334.1| isoleucyl-tRNA synthetase [Shigella boydii 5216-82]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|331671544|ref|ZP_08372342.1| isoleucine--tRNA ligase [Escherichia coli TA280]
 gi|331071389|gb|EGI42746.1| isoleucine--tRNA ligase [Escherichia coli TA280]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|293408117|ref|ZP_06651957.1| isoleucyl-tRNA synthetase [Escherichia coli B354]
 gi|291472368|gb|EFF14850.1| isoleucyl-tRNA synthetase [Escherichia coli B354]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|291280849|ref|YP_003497667.1| Isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|290760722|gb|ADD54683.1| Isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
 gi|320658152|gb|EFX25881.1| isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
           07815]
 gi|320663461|gb|EFX30745.1| isoleucyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|254037441|ref|ZP_04871518.1| isoleucyl-tRNA synthetase [Escherichia sp. 1_1_43]
 gi|226840547|gb|EEH72549.1| isoleucyl-tRNA synthetase [Escherichia sp. 1_1_43]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|218703286|ref|YP_002410805.1| isoleucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|293403099|ref|ZP_06647196.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298378626|ref|ZP_06988510.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300896789|ref|ZP_07115293.1| isoleucine--tRNA ligase [Escherichia coli MS 198-1]
 gi|331661390|ref|ZP_08362314.1| isoleucine--tRNA ligase [Escherichia coli TA143]
 gi|254782400|sp|B7N7Q0|SYI_ECOLU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218430383|emb|CAR11250.1| isoleucyl-tRNA synthetase [Escherichia coli UMN026]
 gi|291430014|gb|EFF03028.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1412]
 gi|298280960|gb|EFI22461.1| isoleucyl-tRNA synthetase [Escherichia coli FVEC1302]
 gi|300359379|gb|EFJ75249.1| isoleucine--tRNA ligase [Escherichia coli MS 198-1]
 gi|331061305|gb|EGI33268.1| isoleucine--tRNA ligase [Escherichia coli TA143]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|215485187|ref|YP_002327618.1| isoleucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312966145|ref|ZP_07780371.1| isoleucyl-tRNA synthetase [Escherichia coli 2362-75]
 gi|254782392|sp|B7UI71|SYI_ECO27 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|215263259|emb|CAS07574.1| isoleucyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
 gi|312289388|gb|EFR17282.1| isoleucyl-tRNA synthetase [Escherichia coli 2362-75]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|212703393|ref|ZP_03311521.1| hypothetical protein DESPIG_01436 [Desulfovibrio piger ATCC 29098]
 gi|212673138|gb|EEB33621.1| hypothetical protein DESPIG_01436 [Desulfovibrio piger ATCC 29098]
          Length = 939

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 19/129 (14%)

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RP    E SA +  YL +  D H G          + +  +           +  H   +
Sbjct: 554 RP----ELSAPADLYL-EGSDQHRGWFH-------SSLLVAEGTRNDPPYKAVLTHGYVV 601

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
           + +GRKMSKS GN I   EL++        + A ++RL +    YRE I  + Q L    
Sbjct: 602 DGDGRKMSKSIGNVIAPQELID-------KYGAEIVRLWVSSVEYREDIRISEQILGRLV 654

Query: 332 ILLSKWPQT 340
               +   T
Sbjct: 655 DAYRRIRNT 663


>gi|170684022|ref|YP_001742141.1| isoleucyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218698446|ref|YP_002406075.1| isoleucyl-tRNA synthetase [Escherichia coli IAI39]
 gi|254782396|sp|B7NHD0|SYI_ECO7I RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782402|sp|B1LFV6|SYI_ECOSM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|170521740|gb|ACB19918.1| isoleucyl-tRNA synthetase [Escherichia coli SMS-3-5]
 gi|218368432|emb|CAR16168.1| isoleucyl-tRNA synthetase [Escherichia coli IAI39]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|170021615|ref|YP_001726569.1| isoleucyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|189082323|sp|B1IRE9|SYI_ECOLC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169756543|gb|ACA79242.1| isoleucyl-tRNA synthetase [Escherichia coli ATCC 8739]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|24111471|ref|NP_705981.1| isoleucyl-tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|81723790|sp|Q83MH2|SYI_SHIFL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24050221|gb|AAN41688.1| isoleucine tRNA synthetase [Shigella flexneri 2a str. 301]
 gi|281599387|gb|ADA72371.1| Isoleucyl-tRNA synthetase [Shigella flexneri 2002017]
 gi|332762298|gb|EGJ92565.1| isoleucyl-tRNA synthetase [Shigella flexneri 2747-71]
 gi|332762585|gb|EGJ92850.1| isoleucyl-tRNA synthetase [Shigella flexneri 4343-70]
 gi|332764867|gb|EGJ95095.1| isoleucyl-tRNA synthetase [Shigella flexneri K-671]
 gi|332768813|gb|EGJ98992.1| isoleucyl-tRNA synthetase [Shigella flexneri 2930-71]
 gi|333009400|gb|EGK28856.1| isoleucyl-tRNA synthetase [Shigella flexneri K-218]
 gi|333022366|gb|EGK41604.1| isoleucyl-tRNA synthetase [Shigella flexneri K-304]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|157159493|ref|YP_001456811.1| isoleucyl-tRNA synthetase [Escherichia coli HS]
 gi|166980056|sp|A7ZVX4|SYI_ECOHS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157065173|gb|ABV04428.1| isoleucyl-tRNA synthetase [Escherichia coli HS]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|16128020|ref|NP_414567.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|74310644|ref|YP_309063.1| isoleucyl-tRNA synthetase [Shigella sonnei Ss046]
 gi|89106910|ref|AP_000690.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           W3110]
 gi|170079689|ref|YP_001729009.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|191168893|ref|ZP_03030664.1| isoleucyl-tRNA synthetase [Escherichia coli B7A]
 gi|193066215|ref|ZP_03047268.1| isoleucyl-tRNA synthetase [Escherichia coli E22]
 gi|193070965|ref|ZP_03051894.1| isoleucyl-tRNA synthetase [Escherichia coli E110019]
 gi|209917215|ref|YP_002291299.1| isoleucyl-tRNA synthetase [Escherichia coli SE11]
 gi|218552610|ref|YP_002385523.1| isoleucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|218693497|ref|YP_002401164.1| isoleucyl-tRNA synthetase [Escherichia coli 55989]
 gi|238899431|ref|YP_002925227.1| isoleucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|256020134|ref|ZP_05433999.1| isoleucyl-tRNA synthetase [Shigella sp. D9]
 gi|260842263|ref|YP_003220041.1| isoleucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|293476688|ref|ZP_06665096.1| isoleucyl-tRNA synthetase [Escherichia coli B088]
 gi|300816058|ref|ZP_07096281.1| isoleucine--tRNA ligase [Escherichia coli MS 107-1]
 gi|300905426|ref|ZP_07123193.1| isoleucine--tRNA ligase [Escherichia coli MS 84-1]
 gi|300919575|ref|ZP_07136067.1| isoleucine--tRNA ligase [Escherichia coli MS 115-1]
 gi|301303540|ref|ZP_07209663.1| isoleucine--tRNA ligase [Escherichia coli MS 124-1]
 gi|307311521|ref|ZP_07591163.1| isoleucyl-tRNA synthetase [Escherichia coli W]
 gi|309797791|ref|ZP_07692175.1| isoleucine--tRNA ligase [Escherichia coli MS 145-7]
 gi|312970118|ref|ZP_07784300.1| isoleucyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|331666258|ref|ZP_08367139.1| isoleucine--tRNA ligase [Escherichia coli TA271]
 gi|331680594|ref|ZP_08381253.1| isoleucine--tRNA ligase [Escherichia coli H591]
 gi|332281289|ref|ZP_08393702.1| isoleucyl-tRNA synthetase [Shigella sp. D9]
 gi|2507434|sp|P00956|SYI_ECOLI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84029566|sp|Q3Z5Y4|SYI_SHISS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782394|sp|B7L4E8|SYI_ECO55 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782398|sp|B7M0C2|SYI_ECO8A RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782399|sp|B1XBF1|SYI_ECODH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782401|sp|B6HZ21|SYI_ECOSE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511502|sp|C4ZPV2|SYI_ECOBW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2367096|gb|AAC73137.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           MG1655]
 gi|73854121|gb|AAZ86828.1| isoleucine tRNA synthetase [Shigella sonnei Ss046]
 gi|85674290|dbj|BAB96595.2| isoleucyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
 gi|169887524|gb|ACB01231.1| isoleucyl-tRNA synthetase [Escherichia coli str. K-12 substr.
           DH10B]
 gi|190901059|gb|EDV60837.1| isoleucyl-tRNA synthetase [Escherichia coli B7A]
 gi|192926140|gb|EDV80781.1| isoleucyl-tRNA synthetase [Escherichia coli E22]
 gi|192955695|gb|EDV86169.1| isoleucyl-tRNA synthetase [Escherichia coli E110019]
 gi|209910474|dbj|BAG75548.1| isoleucyl-tRNA synthase [Escherichia coli SE11]
 gi|218350229|emb|CAU95912.1| isoleucyl-tRNA synthetase [Escherichia coli 55989]
 gi|218359378|emb|CAQ96917.1| isoleucyl-tRNA synthetase [Escherichia coli IAI1]
 gi|238861564|gb|ACR63562.1| isoleucyl-tRNA synthetase [Escherichia coli BW2952]
 gi|257757410|dbj|BAI28907.1| isoleucyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
 gi|260450765|gb|ACX41187.1| isoleucyl-tRNA synthetase [Escherichia coli DH1]
 gi|291321141|gb|EFE60583.1| isoleucyl-tRNA synthetase [Escherichia coli B088]
 gi|300402704|gb|EFJ86242.1| isoleucine--tRNA ligase [Escherichia coli MS 84-1]
 gi|300413321|gb|EFJ96631.1| isoleucine--tRNA ligase [Escherichia coli MS 115-1]
 gi|300531265|gb|EFK52327.1| isoleucine--tRNA ligase [Escherichia coli MS 107-1]
 gi|300841267|gb|EFK69027.1| isoleucine--tRNA ligase [Escherichia coli MS 124-1]
 gi|306908500|gb|EFN38998.1| isoleucyl-tRNA synthetase [Escherichia coli W]
 gi|308118620|gb|EFO55882.1| isoleucine--tRNA ligase [Escherichia coli MS 145-7]
 gi|310337616|gb|EFQ02727.1| isoleucyl-tRNA synthetase [Escherichia coli 1827-70]
 gi|315059251|gb|ADT73578.1| isoleucyl-tRNA synthetase [Escherichia coli W]
 gi|315134720|dbj|BAJ41879.1| isoleucyl-tRNA synthetase [Escherichia coli DH1]
 gi|315255702|gb|EFU35670.1| isoleucine--tRNA ligase [Escherichia coli MS 85-1]
 gi|323160058|gb|EFZ46021.1| isoleucyl-tRNA synthetase [Escherichia coli E128010]
 gi|323171444|gb|EFZ57091.1| isoleucyl-tRNA synthetase [Escherichia coli LT-68]
 gi|323181720|gb|EFZ67133.1| isoleucyl-tRNA synthetase [Escherichia coli 1357]
 gi|323380192|gb|ADX52460.1| isoleucyl-tRNA synthetase [Escherichia coli KO11]
 gi|324017709|gb|EGB86928.1| isoleucine--tRNA ligase [Escherichia coli MS 117-3]
 gi|331066469|gb|EGI38346.1| isoleucine--tRNA ligase [Escherichia coli TA271]
 gi|331072057|gb|EGI43393.1| isoleucine--tRNA ligase [Escherichia coli H591]
 gi|332103641|gb|EGJ06987.1| isoleucyl-tRNA synthetase [Shigella sp. D9]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|328854891|gb|EGG04021.1| hypothetical protein MELLADRAFT_44358 [Melampsora larici-populina
           98AG31]
          Length = 1144

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L G+KMSKS GN +T+ 
Sbjct: 717 PMDVRSSGKDLISNHLSFCIYVHTALFDEQFWPRTMRANGHLMLNGKKMSKSTGNSLTLR 776

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + L       R + A   R+A+
Sbjct: 777 DSL-------RKFGADATRVAL 791


>gi|326407749|gb|ADZ64820.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 880

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/193 (25%), Positives = 74/193 (38%), Gaps = 25/193 (12%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 459 GWPDENSADFKRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   +++E        + A  +R  +        + + F+  ++  A 
Sbjct: 517 EGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYDKMDAAW 568

Query: 332 ILLSKWPQTST-----SKGIIDPAVLSALYNDLN-TVSA------IQALHKLARESTKNH 379
             ++K    S      ++ +   AV SAL    N T         +  L+  AR  T+  
Sbjct: 569 NFINKIWNVSRYILMNAEDVSADAVSSALTKVANKTAGNVTDRWILTRLNDTARRVTEQM 628

Query: 380 DLLPIFNASAHIL 392
           D    F  + HIL
Sbjct: 629 DKFE-FGVAGHIL 640


>gi|324118377|gb|EGC12271.1| isoleucyl-tRNA synthetase [Escherichia coli E1167]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|315930154|gb|EFV09278.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 548

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAILNDAFEARALQKIPDYLKNLAANFH 485


>gi|331681407|ref|ZP_08382044.1| isoleucine--tRNA ligase [Escherichia coli H299]
 gi|331081628|gb|EGI52789.1| isoleucine--tRNA ligase [Escherichia coli H299]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|307353949|ref|YP_003895000.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157182|gb|ADN36562.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 669

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 24/135 (17%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      HIG+ R  +  D   R LR+   E  V ++    +    ++  +  E  
Sbjct: 9   TCGLPYTNGPCHIGHLRTYVPADFYVRFLRHCGEE--VVFICGSDNHGTPVVISSEAE-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATNHIPQMIYLIQNII 140
                 +   I  +    F +   ++  +         P +  R T  I      + ++I
Sbjct: 65  ----GISPREICERYHTHFYETFRKMEVIFDRFGMTDDPANHKR-TRSI------VTDLI 113

Query: 141 LHGHAYEANNEIIFD 155
            +G+ YE      + 
Sbjct: 114 NNGYIYEKTVSQCYC 128


>gi|301648410|ref|ZP_07248146.1| isoleucine--tRNA ligase [Escherichia coli MS 146-1]
 gi|307136628|ref|ZP_07495984.1| isoleucyl-tRNA synthetase [Escherichia coli H736]
 gi|331640473|ref|ZP_08341621.1| isoleucine--tRNA ligase [Escherichia coli H736]
 gi|301073545|gb|EFK88351.1| isoleucine--tRNA ligase [Escherichia coli MS 146-1]
 gi|315616199|gb|EFU96818.1| isoleucyl-tRNA synthetase [Escherichia coli 3431]
 gi|331040219|gb|EGI12426.1| isoleucine--tRNA ligase [Escherichia coli H736]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|301330211|ref|ZP_07222871.1| isoleucine--tRNA ligase [Escherichia coli MS 78-1]
 gi|300843773|gb|EFK71533.1| isoleucine--tRNA ligase [Escherichia coli MS 78-1]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|301048404|ref|ZP_07195431.1| isoleucine--tRNA ligase [Escherichia coli MS 185-1]
 gi|300299697|gb|EFJ56082.1| isoleucine--tRNA ligase [Escherichia coli MS 185-1]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|194434542|ref|ZP_03066800.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1012]
 gi|194417195|gb|EDX33306.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1012]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|156043451|ref|XP_001588282.1| hypothetical protein SS1G_10729 [Sclerotinia sclerotiorum 1980]
 gi|154695116|gb|EDN94854.1| hypothetical protein SS1G_10729 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 1046

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 70/230 (30%), Gaps = 61/230 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T++
Sbjct: 627 PLDLRVSGKDLIPNHLTFFLYIHIAIFPPEYWPKGVRANGHLLLNGEKMSKSTGNFMTLS 686

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           +++         + A   R+A+                                 G+ D 
Sbjct: 687 DMIN-------KYGADASRIAL----------------------------ADAGDGVADA 711

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                + +  N V  +  L +   +  K  D L                + L+      +
Sbjct: 712 NFEEDVAD--NNVLRLYTLREWCEDMVKEQDSLRTGEK----------NDFLDALFENEM 759

Query: 410 EKLVQERLILLKMKKFSSA------------DYIRKQLESKGFILEDYKN 447
             +VQE     +   +  A            D+ R+   + G   + +K+
Sbjct: 760 NAIVQECRQHYEATDYKLALKLALYDFTGARDFYREASIAAGI--KMHKD 807


>gi|84503349|ref|ZP_01001418.1| isoleucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84388259|gb|EAQ01210.1| isoleucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 998

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 55/170 (32%), Gaps = 35/170 (20%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 652 QACGTKGRAPYRNVVTHGFTLDEKGNKMSKSLGNTILPEEVV-------KQYGADILRLW 704

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------STSKGIIDPAVL 352
           +    Y        + L        +   T                        ++  VL
Sbjct: 705 VAQADYSADQRIGPEILKGVADSYRRLRNTLRFMLGSLADFREEDRVAPEEMPELERWVL 764

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
             +            L +  RE  ++ D   +F A  +   +E+   + +
Sbjct: 765 HRM----------AVLDETVREGYRSFDFQAMFQAVFNFATVELSAFYFD 804


>gi|157154999|ref|YP_001461194.1| isoleucyl-tRNA synthetase [Escherichia coli E24377A]
 gi|218547459|ref|YP_002381250.1| isoleucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|260853236|ref|YP_003227127.1| isoleucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|166980055|sp|A7ZHB5|SYI_ECO24 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782404|sp|B7LVN2|SYI_ESCF3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157077029|gb|ABV16737.1| isoleucyl-tRNA synthetase [Escherichia coli E24377A]
 gi|218355000|emb|CAQ87606.1| isoleucyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
 gi|257751885|dbj|BAI23387.1| isoleucyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
 gi|320200458|gb|EFW75044.1| Isoleucyl-tRNA synthetase [Escherichia coli EC4100B]
 gi|323157918|gb|EFZ44021.1| isoleucyl-tRNA synthetase [Escherichia coli EPECa14]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|333010517|gb|EGK29950.1| isoleucyl-tRNA synthetase [Shigella flexneri VA-6]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|322489540|emb|CBZ24798.1| putative leucyl-tRNA synthetase [Leishmania mexicana
           MHOM/GT/2001/U1103]
          Length = 1075

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 29/151 (19%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     + +   A     NG + ++  KM+KS GNF
Sbjct: 682 PVDLRCSGKDLIQNHLTMFLYNHAAIWPTDEGMWPQAI--FCNGHIQVDNEKMAKSKGNF 739

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR-----------LTEAEIL 333
           I++ E ++        + A   RLA        +  +F  +            L +A+  
Sbjct: 740 ISLREAMDL-------YGADATRLACADAGDSMDDANFVRETAAGFVLKMTTLLEQAKET 792

Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
           + +           D        N +NT+ A
Sbjct: 793 VERTDLRGGDYNEFDKIF----NNTMNTLIA 819


>gi|256846630|ref|ZP_05552086.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294784339|ref|ZP_06749630.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|256717850|gb|EEU31407.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|294487911|gb|EFG35266.1| isoleucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 933

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN ++  +++       + + A ++RL 
Sbjct: 581 SVASTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVSPADVI-------KVYGADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 633 CGSVDYRDDVRISDNIVKQMSEAYRRIRNTAR 664


>gi|196250006|ref|ZP_03148701.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|189030345|sp|A4IRY3|SYL_GEOTN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|196210520|gb|EDY05284.1| leucyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 805

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDVYIGGAEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++E+         A  +RL  M M      I ++ + L  A   L + W    
Sbjct: 583 NVVNPDDIVESHG-------ADTLRLYEMFMGPLEASIAWSTKGLDGARRFLERVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           T  G ++P ++    ND  T+   +  H+  ++ T++++ L    A + ++
Sbjct: 636 TEDGQLNPNIVDEPAND--TLE--RVYHQTVKKVTEDYEALRFNTAISQLM 682


>gi|82775428|ref|YP_401775.1| isoleucyl-tRNA synthetase [Shigella dysenteriae Sd197]
 gi|123563562|sp|Q32K71|SYI_SHIDS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81239576|gb|ABB60286.1| isoleucine tRNA synthetase [Shigella dysenteriae Sd197]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|110640237|ref|YP_667965.1| isoleucyl-tRNA synthetase [Escherichia coli 536]
 gi|191174124|ref|ZP_03035638.1| isoleucyl-tRNA synthetase [Escherichia coli F11]
 gi|300984127|ref|ZP_07176878.1| isoleucine--tRNA ligase [Escherichia coli MS 200-1]
 gi|123344416|sp|Q0TLW5|SYI_ECOL5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110341829|gb|ABG68066.1| Isoleucyl-tRNA synthetase [Escherichia coli 536]
 gi|190905618|gb|EDV65243.1| isoleucyl-tRNA synthetase [Escherichia coli F11]
 gi|300306752|gb|EFJ61272.1| isoleucine--tRNA ligase [Escherichia coli MS 200-1]
 gi|315298460|gb|EFU57715.1| isoleucine--tRNA ligase [Escherichia coli MS 16-3]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|332674353|gb|AEE71170.1| leucine--tRNA ligase [Helicobacter pylori 83]
          Length = 661

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGTKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTST 342
             A   + +    ++
Sbjct: 617 EGAHRFIKRLYDKAS 631



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|325495943|gb|EGC93802.1| isoleucyl-tRNA synthetase [Escherichia fergusonii ECD227]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|309781281|ref|ZP_07676017.1| leucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308919694|gb|EFP65355.1| leucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 877

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGVAYRKTGTVNWD 165


>gi|260866176|ref|YP_003232578.1| isoleucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|257762532|dbj|BAI34027.1| isoleucyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
 gi|323176331|gb|EFZ61923.1| isoleucyl-tRNA synthetase [Escherichia coli 1180]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|242238039|ref|YP_002986220.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130096|gb|ACS84398.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 940

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I   ++++          A ++RL 
Sbjct: 579 IATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTIAPQDVMDKMG-------ADILRLW 631

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 632 IGSTDYSGDIAVSDEILKRSADAYRRIRNTARFLLANLNGFDPA 675


>gi|156935453|ref|YP_001439369.1| isoleucyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
 gi|166200207|sp|A7MIM3|SYI_ENTS8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|156533707|gb|ABU78533.1| hypothetical protein ESA_03312 [Cronobacter sakazakii ATCC BAA-894]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADAYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|241664156|ref|YP_002982516.1| leucyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240866183|gb|ACS63844.1| leucyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 877

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGVAYRKTGTVNWD 165


>gi|138896379|ref|YP_001126832.1| leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|134267892|gb|ABO68087.1| Leucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 811

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 19/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H                    E    ++     L     KMSKS G
Sbjct: 529 PVDVYIGGAEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGENNEKMSKSKG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++E+         A  +RL  M M      I ++ + L  A   L + W    
Sbjct: 589 NVVNPDDIVESHG-------ADTLRLYEMFMGPLEASIAWSTKGLDGARRFLERVWRLFV 641

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           T  G ++P ++    ND  T+   +  H+  ++ T++++ L    A + ++
Sbjct: 642 TEDGQLNPNIVDEPAND--TLE--RVYHQTVKKVTEDYEALRFNTAISQLM 688


>gi|49475612|ref|YP_033653.1| methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|49238419|emb|CAF27646.1| Methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 519

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 17/133 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R           +N+  +        + +  ++ +  
Sbjct: 14  PNGAPHIGHAYSAIASDVLARFQRLDG--------KNVFFLSGTDEHGLKMQQTAVALGI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEAN 149
               +T +N+  F K    L C       R T         ++    + +  +G  Y + 
Sbjct: 66  TPKQLTDRNSAVFQKMLAALNCSNNDF-IRTTEKRHYQACQEIW---KKMKANGDIYLSR 121

Query: 150 NEIIFDTSSIPNY 162
               +       Y
Sbjct: 122 YTGWYSVRQEAYY 134


>gi|18977262|ref|NP_578619.1| leucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|32171573|sp|Q8U2E6|SYL_PYRFU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|18892929|gb|AAL81014.1| leucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 55/163 (33%), Gaps = 13/163 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I         +        NGF  LEG+KMSKS GN +   
Sbjct: 603 PLDWRCSAKDLIPNHLTFFIFNHVAIFPEKHWPKGIAVNGFGTLEGQKMSKSKGNVLNFI 662

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++    +    D+  + +      + ++ +  +     +
Sbjct: 663 DAIEENG-------ADVVRLYIMSLAEHDSDFDWRRKEVGRLRKQIERFYELISQFAEYE 715

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                 L +    +     LH+L +      D L  F     +
Sbjct: 716 ARENVELKD----IDKWM-LHRLNKAIKGTTDALEEFRTRTAV 753



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P +    H+G+AR   + DV+ R  R            +IT
Sbjct: 43 PYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHIT 83


>gi|86139175|ref|ZP_01057745.1| isoleucyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85824019|gb|EAQ44224.1| isoleucyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 971

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 625 QACGTKGRAPYKNVVTHGFTLDGKGNKMSKSLGNTIVPEEIV-------KQYGADILRLW 677

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 678 VAQTDYTSDQRIGPEILKGTADSYRRLRNT 707


>gi|332090384|gb|EGI95482.1| isoleucyl-tRNA synthetase [Shigella boydii 3594-74]
          Length = 860

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 498 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 550

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 551 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 604

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 605 VLDRWAVGCAKAAQEDILKAYEA 627


>gi|331645129|ref|ZP_08346240.1| isoleucine--tRNA ligase [Escherichia coli M605]
 gi|330909872|gb|EGH38382.1| isoleucyl-tRNA synthetase [Escherichia coli AA86]
 gi|331045886|gb|EGI18005.1| isoleucine--tRNA ligase [Escherichia coli M605]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|301019792|ref|ZP_07183936.1| isoleucine--tRNA ligase [Escherichia coli MS 69-1]
 gi|300399079|gb|EFJ82617.1| isoleucine--tRNA ligase [Escherichia coli MS 69-1]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|167755851|ref|ZP_02427978.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
 gi|167704790|gb|EDS19369.1| hypothetical protein CLORAM_01368 [Clostridium ramosum DSM 1402]
          Length = 873

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 87/237 (36%), Gaps = 26/237 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K  PAD   WK+   +   W S   W     GW    S +   Y      +   G D+I
Sbjct: 428 GKNPPADLENWKQDEDVLDTWFSSALWPFSTLGWPNTDSELFKRYFPTNTLV--TGYDII 485

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS          ++ IH    + +GRKMSKS GN +   ++++        
Sbjct: 486 FFWVSRMIFQSLHFTEERPFEHVLIHGLIRDEQGRKMSKSLGNGVDPMDVID-------E 538

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALY 356
           + A  +R  +       P   + +  ++L  +   ++K   ++      I D      L 
Sbjct: 539 YGADTLRFFLTTNS--APGMDLRYIPEKLEASWNFINKIWNSARFVLMNIDDEMKFEELS 596

Query: 357 -NDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
            ++LN      +  L+++ RE   N D     N      G E+ K   +   S  IE
Sbjct: 597 FDNLNLCDKWILNRLNEVIREVDINMDKFEFVNV-----GSELYKFIWDDFCSWYIE 648


>gi|91209083|ref|YP_539069.1| isoleucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|117622315|ref|YP_851228.1| isoleucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218556963|ref|YP_002389876.1| isoleucyl-tRNA synthetase [Escherichia coli S88]
 gi|237704165|ref|ZP_04534646.1| isoleucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|123266167|sp|Q1RGH6|SYI_ECOUT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200206|sp|A1A774|SYI_ECOK1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782393|sp|B7MAE6|SYI_ECO45 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91070657|gb|ABE05538.1| isoleucyl-tRNA synthetase [Escherichia coli UTI89]
 gi|115511439|gb|ABI99513.1| isoleucyl-tRNA synthetase [Escherichia coli APEC O1]
 gi|218363732|emb|CAR01392.1| isoleucyl-tRNA synthetase [Escherichia coli S88]
 gi|226902077|gb|EEH88336.1| isoleucyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
 gi|294493800|gb|ADE92556.1| isoleucyl-tRNA synthetase [Escherichia coli IHE3034]
 gi|307629597|gb|ADN73901.1| isoleucyl-tRNA synthetase [Escherichia coli UM146]
 gi|315285014|gb|EFU44459.1| isoleucine--tRNA ligase [Escherichia coli MS 110-3]
 gi|323950486|gb|EGB46364.1| isoleucyl-tRNA synthetase [Escherichia coli H252]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|254193486|ref|ZP_04899920.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169650239|gb|EDS82932.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|300939436|ref|ZP_07154098.1| isoleucine--tRNA ligase [Escherichia coli MS 21-1]
 gi|300455657|gb|EFK19150.1| isoleucine--tRNA ligase [Escherichia coli MS 21-1]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|300948627|ref|ZP_07162711.1| isoleucine--tRNA ligase [Escherichia coli MS 116-1]
 gi|300956953|ref|ZP_07169205.1| isoleucine--tRNA ligase [Escherichia coli MS 175-1]
 gi|301024769|ref|ZP_07188407.1| isoleucine--tRNA ligase [Escherichia coli MS 196-1]
 gi|331650915|ref|ZP_08351943.1| isoleucine--tRNA ligase [Escherichia coli M718]
 gi|299880259|gb|EFI88470.1| isoleucine--tRNA ligase [Escherichia coli MS 196-1]
 gi|300316243|gb|EFJ66027.1| isoleucine--tRNA ligase [Escherichia coli MS 175-1]
 gi|300451853|gb|EFK15473.1| isoleucine--tRNA ligase [Escherichia coli MS 116-1]
 gi|331051369|gb|EGI23418.1| isoleucine--tRNA ligase [Escherichia coli M718]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|15799708|ref|NP_285720.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
 gi|15829283|ref|NP_308056.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|168751720|ref|ZP_02776742.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|168756850|ref|ZP_02781857.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|168766714|ref|ZP_02791721.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|168776942|ref|ZP_02801949.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|168781723|ref|ZP_02806730.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|168785077|ref|ZP_02810084.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|168801907|ref|ZP_02826914.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|195937699|ref|ZP_03083081.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
 gi|208809478|ref|ZP_03251815.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208812638|ref|ZP_03253967.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208818279|ref|ZP_03258599.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209400433|ref|YP_002268632.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|217324466|ref|ZP_03440550.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254791161|ref|YP_003075998.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|261226784|ref|ZP_05941065.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255187|ref|ZP_05947720.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
 gi|81765401|sp|Q8XA49|SYI_ECO57 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782395|sp|B5YYB8|SYI_ECO5E RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|12512709|gb|AAG54328.1|AE005179_5 isoleucine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
 gi|13359485|dbj|BAB33452.1| isoleucine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
 gi|187767722|gb|EDU31566.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
 gi|188014298|gb|EDU52420.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
 gi|189000725|gb|EDU69711.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
 gi|189356087|gb|EDU74506.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
 gi|189364054|gb|EDU82473.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
 gi|189375026|gb|EDU93442.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
 gi|189375994|gb|EDU94410.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
 gi|208729279|gb|EDZ78880.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
 gi|208733915|gb|EDZ82602.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
 gi|208738402|gb|EDZ86084.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
 gi|209161833|gb|ACI39266.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
 gi|209748716|gb|ACI72665.1| isoleucine tRNA synthetase [Escherichia coli]
 gi|209748718|gb|ACI72666.1| isoleucine tRNA synthetase [Escherichia coli]
 gi|209748720|gb|ACI72667.1| isoleucine tRNA synthetase [Escherichia coli]
 gi|217320687|gb|EEC29111.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
 gi|254590561|gb|ACT69922.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
 gi|320190455|gb|EFW65105.1| Isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
 gi|320642066|gb|EFX11417.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
 gi|320647429|gb|EFX16224.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
 gi|320652763|gb|EFX21001.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
 gi|320668773|gb|EFX35568.1| isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
 gi|326345258|gb|EGD69001.1| Isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
 gi|326346889|gb|EGD70623.1| Isoleucyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|26245947|ref|NP_751986.1| isoleucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218687900|ref|YP_002396112.1| isoleucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|227885080|ref|ZP_04002885.1| isoleucyl-tRNA synthetase [Escherichia coli 83972]
 gi|300980955|ref|ZP_07175269.1| isoleucine--tRNA ligase [Escherichia coli MS 45-1]
 gi|331661061|ref|ZP_08361993.1| isoleucine--tRNA ligase [Escherichia coli TA206]
 gi|81478576|sp|Q8FLB7|SYI_ECOL6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782397|sp|B7MNN1|SYI_ECO81 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|26106344|gb|AAN78530.1|AE016755_30 Isoleucyl-tRNA synthetase [Escherichia coli CFT073]
 gi|218425464|emb|CAR06246.1| isoleucyl-tRNA synthetase [Escherichia coli ED1a]
 gi|222031857|emb|CAP74595.1| Isoleucyl-tRNA synthetase [Escherichia coli LF82]
 gi|227837909|gb|EEJ48375.1| isoleucyl-tRNA synthetase [Escherichia coli 83972]
 gi|281177237|dbj|BAI53567.1| isoleucyl-tRNA synthetase [Escherichia coli SE15]
 gi|300409112|gb|EFJ92650.1| isoleucine--tRNA ligase [Escherichia coli MS 45-1]
 gi|307551867|gb|ADN44642.1| isoleucyl-tRNA synthetase [Escherichia coli ABU 83972]
 gi|312944629|gb|ADR25456.1| isoleucyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315293405|gb|EFU52757.1| isoleucine--tRNA ligase [Escherichia coli MS 153-1]
 gi|320197533|gb|EFW72147.1| Isoleucyl-tRNA synthetase [Escherichia coli WV_060327]
 gi|323190295|gb|EFZ75571.1| isoleucyl-tRNA synthetase [Escherichia coli RN587/1]
 gi|331052103|gb|EGI24142.1| isoleucine--tRNA ligase [Escherichia coli TA206]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|187730740|ref|YP_001878850.1| isoleucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|254782436|sp|B2U245|SYI_SHIB3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187427732|gb|ACD07006.1| isoleucyl-tRNA synthetase [Shigella boydii CDC 3083-94]
 gi|320173364|gb|EFW48566.1| Isoleucyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
 gi|320186137|gb|EFW60879.1| Isoleucyl-tRNA synthetase [Shigella flexneri CDC 796-83]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|237734819|ref|ZP_04565300.1| valyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382147|gb|EEO32238.1| valyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 874

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 53/237 (22%), Positives = 87/237 (36%), Gaps = 26/237 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K  PAD   WK+   +   W S   W     GW    S +   Y      +   G D+I
Sbjct: 429 GKNPPADLENWKQDEDVLDTWFSSALWPFSTLGWPNTDSELFKRYFPTNTLV--TGYDII 486

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS          ++ IH    + +GRKMSKS GN +   ++++        
Sbjct: 487 FFWVSRMIFQSLHFTEERPFEHVLIHGLIRDEQGRKMSKSLGNGVDPMDVID-------E 539

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALY 356
           + A  +R  +       P   + +  ++L  +   ++K   ++      I D      L 
Sbjct: 540 YGADTLRFFLTTNS--APGMDLRYIPEKLEASWNFINKIWNSARFVLMNIDDEMKFEELS 597

Query: 357 -NDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
            ++LN      +  L+++ RE   N D     N      G E+ K   +   S  IE
Sbjct: 598 FDNLNLCDKWILNRLNEVIREVDINMDKFEFVNV-----GSELYKFIWDDFCSWYIE 649


>gi|82542642|ref|YP_406589.1| isoleucyl-tRNA synthetase [Shigella boydii Sb227]
 gi|123560617|sp|Q326J7|SYI_SHIBS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81244053|gb|ABB64761.1| isoleucine tRNA synthetase [Shigella boydii Sb227]
          Length = 938

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|126443976|ref|YP_001062864.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126223467|gb|ABN86972.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|53716620|ref|YP_105643.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67642268|ref|ZP_00441027.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|124381802|ref|YP_001024052.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126447796|ref|YP_001078558.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|166999605|ref|ZP_02265442.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|254173999|ref|ZP_04880662.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254200439|ref|ZP_04906804.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254204465|ref|ZP_04910818.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254356692|ref|ZP_04972967.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81823796|sp|Q62CD5|SYI2_BURMA RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|52422590|gb|AAU46160.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|124289822|gb|ABM99091.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126240650|gb|ABO03762.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147748051|gb|EDK55126.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147754051|gb|EDK61115.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148025719|gb|EDK83842.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160695046|gb|EDP85016.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238523379|gb|EEP86818.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243064434|gb|EES46620.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|167043876|gb|ABZ08565.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG3E18]
          Length = 951

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 38/177 (21%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +                + NG + ++G+KMSKS GN I + E +   
Sbjct: 578 SGRDLVPNHLTFFVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGNIIPLREAV--- 634

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
               R + A  IRL +L          + + L +A+  +                 L+++
Sbjct: 635 ----RKYGADPIRLTILN---------SAELLQDADFNVEAIKGIKNK--------LASM 673

Query: 356 YNDLNTVSAIQ-------------ALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           Y D     A +              L  L   + K+ D + +  A  HIL  +   E
Sbjct: 674 YEDCTKTKAEKFPELEPEDKWIHGILQNLVLNAGKSMDEIRLREALHHIL-FDFDSE 729


>gi|226198545|ref|ZP_03794112.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225929468|gb|EEH25488.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 973

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 621 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 673

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 674 STDYAAEMSISDEILERVVETYRRMRNT 701


>gi|167898466|ref|ZP_02485867.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 863

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|167849864|ref|ZP_02475372.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 880

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 621 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 673

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 674 STDYAAEMSISDEILERVVETYRRMRNT 701


>gi|126456514|ref|YP_001075817.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242312630|ref|ZP_04811647.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|126230282|gb|ABN93695.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242135869|gb|EES22272.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 973

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 621 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 673

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 674 STDYAAEMSISDEILERVVETYRRMRNT 701


>gi|76817250|ref|YP_335493.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254262772|ref|ZP_04953637.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|254301827|ref|ZP_04969270.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|76581723|gb|ABA51197.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157811646|gb|EDO88816.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|254213774|gb|EET03159.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 973

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 621 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 673

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 674 STDYAAEMSISDEILERVVETYRRMRNT 701


>gi|226329206|ref|ZP_03804724.1| hypothetical protein PROPEN_03109 [Proteus penneri ATCC 35198]
 gi|225202392|gb|EEG84746.1| hypothetical protein PROPEN_03109 [Proteus penneri ATCC 35198]
          Length = 936

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 549 EYHGNSADMYLEGSDQHRGWFMSSLMISTAIKGKAPYREVLTHGFTVDGQGRKMSKSIGN 608

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            ++  ++++          A ++RL +  T Y   I  + + L  +     +   T+   
Sbjct: 609 TVSPQDVMDKLG-------ADILRLWVASTDYTGEIAVSDEILKRSADTYRRIRNTARFF 661

Query: 342 -TSKGIIDPA 350
             +    DPA
Sbjct: 662 LANLNGFDPA 671


>gi|150402643|ref|YP_001329937.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|150033673|gb|ABR65786.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 1034

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN ++ +++ E        + A V+R 
Sbjct: 571 ALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTE-------QYGADVLRF 623

Query: 310 AMLMTH--YREPIDFTVQRLTEAEILLSKW 337
            +L  +  + E + F+   + E   +L+  
Sbjct: 624 YLLSANKAW-EDLRFSYSEMDETRSMLNTL 652


>gi|323955220|gb|EGB50993.1| isoleucyl-tRNA synthetase [Escherichia coli H263]
          Length = 894

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|17547463|ref|NP_520865.1| leucyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|48428559|sp|Q8XVT3|SYL_RALSO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17429766|emb|CAD16451.1| probable leucyl-trna synthetase (leucine--trna ligase) (leurs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 877

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMMRQLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTGTVNWD 165


>gi|332098111|gb|EGJ03084.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 155-74]
          Length = 922

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 560 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 612

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 613 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 666

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 667 VLDRWAVGCAKAAQEDILKAYEA 689


>gi|53722340|ref|YP_111325.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|81824514|sp|Q63KP6|SYI2_BURPS RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|52212754|emb|CAH38786.1| putative isoleucyl-tRNA synthetase [Burkholderia pseudomallei
           K96243]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|299065703|emb|CBJ36877.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
           solanacearum CMR15]
          Length = 883

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRQLRMKGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ ++    A +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAALNNGVAPAAWTYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTGTVNWD 165


>gi|297583533|ref|YP_003699313.1| leucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297141990|gb|ADH98747.1| leucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 805

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +++L++         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDILQSHG-------ADTLRLYEMFMGPLDAAIAWSDNGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSA 354
              G + P +  A
Sbjct: 636 KDDGALSPQIQDA 648


>gi|32423702|gb|AAP81245.1| isoleucyl tRNA synthetase [Candidatus Portiera aleyrodidarum]
          Length = 948

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 19/123 (15%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H + I  S           +  H   ++  G+KMSKS GN ++   ++         + A
Sbjct: 580 HTSLIT-SAAISGHAPFNKLLSHCFTVDKNGQKMSKSIGNVVSPQTIIS-------KYGA 631

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAVLS 353
            ++RL ++   Y   +  +   +        +   T+            SK  IDP  L 
Sbjct: 632 DILRLWVVSKDYESEMTMSEDIIQLIADSYRRLRNTTRFMIANLSGFDQSKHGIDPEKLL 691

Query: 354 ALY 356
           AL 
Sbjct: 692 ALD 694


>gi|72382161|ref|YP_291516.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|123732640|sp|Q46L15|SYL_PROMT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72002011|gb|AAZ57813.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 862

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 47/158 (29%), Gaps = 16/158 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DVL R  R       V +              A      I  
Sbjct: 51  PYPSGSLHMGHVRNYVITDVLARYKRMKGFN--VLHPMGWDSFGLPAENAA------IER 102

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
             + S  T KN  Q      RL  L+       T    +     Q     +  +  AY+ 
Sbjct: 103 EISPSTWTDKNISQMKDQLDRLG-LSIDWSKEVTTCKEEYYKWTQYIFNQLHKNNLAYQK 161

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              + +D          +  ++D +    R   K  KK
Sbjct: 162 KATVNWDPIDQT---VLANEQVDAEGKSWRSGAKVEKK 196


>gi|88705745|ref|ZP_01103455.1| Leucyl-tRNA synthetase [Congregibacter litoralis KT71]
 gi|88700258|gb|EAQ97367.1| Leucyl-tRNA synthetase [Congregibacter litoralis KT71]
          Length = 819

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 38/147 (25%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    + +  G +  +G KMSKS GN +    L+++         A  +RL  +      
Sbjct: 561 EPFTRL-LTQGMVLKDGAKMSKSKGNTVDPQSLIDSHG-------ADTVRLFSLFAAPPD 612

Query: 318 EPIDFTVQRLTEAE---ILLSKWPQTSTSKGIIDPAVLSALYN---D------------- 358
           + ++++   +  A+     L +     T +G       +AL +   D             
Sbjct: 613 QSLEWSEDGVEGAQRFVKRLWRLVHEHTDQGPAPALDSAALNDGERDVRRKIHETIAKVS 672

Query: 359 --------LNTVSAIQALHKLARESTK 377
                    NT  AI A+ +L  E ++
Sbjct: 673 DDMGRRQTFNT--AIAAVMELCNELSR 697


>gi|167820031|ref|ZP_02451711.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 872

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|167742859|ref|ZP_02415633.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 804

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 566 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 618

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 619 STDYAAEMSISDEILERVVETYRRMRNT 646


>gi|45359037|ref|NP_988594.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|74553693|sp|Q6LX78|SYI_METMP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|45047912|emb|CAF31030.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 1034

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN ++ +++ E        + A V+R 
Sbjct: 571 ALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTE-------QYGADVLRF 623

Query: 310 AMLMTH--YREPIDFTVQRLTEAEILLSKW 337
            +L  +  + E + F+   + E   +L+  
Sbjct: 624 YLLSANKAW-EDLRFSYSEMDETRSMLNTL 652


>gi|323702140|ref|ZP_08113807.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532827|gb|EGB22699.1| isoleucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 930

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 50/140 (35%), Gaps = 23/140 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   +++           A ++RL +
Sbjct: 574 SVAVTSKPPYKAVLTHGFVVDEKGRKMSKSLGNVVDPLKVINQMG-------ADILRLWV 626

Query: 312 LMTHYREPIDFTVQRLTE-----------AEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               YR  +  +   L +           A  LL        +K  +D A L  L     
Sbjct: 627 SSADYRGDLSVSQNILKQMTESYRKIRNTARFLLGNLYDFDPAKDKVDYADLPELD---- 682

Query: 361 TVSAIQALHKLARESTKNHD 380
              A+  LHKL +     ++
Sbjct: 683 -RVALMELHKLIKRVLAAYE 701


>gi|309787320|ref|ZP_07681932.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1617]
 gi|308924898|gb|EFP70393.1| isoleucyl-tRNA synthetase [Shigella dysenteriae 1617]
          Length = 922

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 560 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 612

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 613 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 666

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 667 VLDRWAVGCAKAAQEDILKAYEA 689


>gi|217418644|ref|ZP_03450151.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217397948|gb|EEC37963.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 996

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       +  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 644 CAADGRAPFRAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 696

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 697 STDYAAEMSISDEILERVVETYRRMRNT 724


>gi|167828413|ref|ZP_02459884.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 830

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 574 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 626

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 627 STDYAAEMSISDEILERVVETYRRMRNT 654


>gi|134045150|ref|YP_001096636.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
 gi|132662775|gb|ABO34421.1| Isoleucyl-tRNA synthetase [Methanococcus maripaludis C5]
          Length = 1034

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN ++ +++ E        + A V+R 
Sbjct: 571 ALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTE-------QYGADVLRF 623

Query: 310 AMLMTH--YREPIDFTVQRLTEAEILLSKW 337
            +L  +  + E + F+   + E   +L+  
Sbjct: 624 YLLSANKAW-EDLRFSYSEMDETRSMLNTL 652


>gi|78776979|ref|YP_393294.1| isoleucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|123550505|sp|Q30SH2|SYI_SULDN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78497519|gb|ABB44059.1| Isoleucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 919

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +G KMSKS GN +    +L       + + + ++RL +
Sbjct: 585 SAAVEHKAPYKGVLTHGFTVDEKGEKMSKSKGNVVAPETVL-------KEYGSEILRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+  +  +   L ++     K   T
Sbjct: 638 ASSDYQGDLKISQSILKQSAENYRKLRNT 666


>gi|255551751|ref|XP_002516921.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
 gi|223544009|gb|EEF45535.1| isoleucyl tRNA synthetase, putative [Ricinus communis]
          Length = 1102

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 7/142 (4%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S         +++  H   L+ +G KMSKS GN +    ++E  K  G   ++ A V+RL
Sbjct: 710 SIATKGKAPYSSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGKSAGGAPAYGADVLRL 769

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSAL-YNDLNTVS--A 364
            +    Y   +    Q L +   +  K   T       + D     A+ Y+DL  +   A
Sbjct: 770 WVSSVDYTGDVMIGPQILRQMSDIYRKLRGTLRYLLGNLHDWKADDAVSYDDLPMIDKHA 829

Query: 365 IQALHKLARESTKNHDLLPIFN 386
           +  L  + +   ++++    F 
Sbjct: 830 LYQLENVVKNIRESYENYQFFK 851


>gi|167915171|ref|ZP_02502262.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 939

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       +  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|110804093|ref|YP_687613.1| isoleucyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
 gi|110613641|gb|ABF02308.1| isoleucine tRNA synthetase [Shigella flexneri 5 str. 8401]
          Length = 922

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 560 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 612

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 613 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 666

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 667 VLDRWAVGCAKAAQEDILKAYEA 689


>gi|302328190|gb|ADL27391.1| methionine--tRNA ligase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 693

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 25/156 (16%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG++   ++ D+L R  +    +   T+    TD   + ++RA  +      N 
Sbjct: 16  VNDAPHIGHSYTTVLADILTRFHKIIGYQ---TFFLTGTDEHGQKVQRAAAKR-----NV 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                  +   +F     ++         R T   H   +   +Q +   G  Y    E 
Sbjct: 68  TPQEHVDEYYHRFEDLWKKMNIQN-DFFIRTTMPEHKAYVQECLQKLWDKGEIYSKEYEG 126

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
            +                 E++  +      +K +P
Sbjct: 127 WYSVG--------------EERFFSEDELDENKCDP 148


>gi|261417229|ref|YP_003250912.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373685|gb|ACX76430.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 690

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 50/156 (32%), Gaps = 25/156 (16%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG++   ++ D+L R  +    +   T+    TD   + ++RA  +      N 
Sbjct: 13  VNDAPHIGHSYTTVLADILTRFHKIIGYQ---TFFLTGTDEHGQKVQRAAAKR-----NV 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                  +   +F     ++         R T   H   +   +Q +   G  Y    E 
Sbjct: 65  TPQEHVDEYYHRFEDLWKKMNIQN-DFFIRTTMPEHKAYVQECLQKLWDKGEIYSKEYEG 123

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
            +                 E++  +      +K +P
Sbjct: 124 WYSVG--------------EERFFSEDELDENKCDP 145


>gi|254183692|ref|ZP_04890284.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184214225|gb|EDU11268.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       +  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|237510265|ref|ZP_04522980.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|235002470|gb|EEP51894.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       +  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|167923006|ref|ZP_02510097.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       +  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|159905582|ref|YP_001549244.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
 gi|159887075|gb|ABX02012.1| isoleucyl-tRNA synthetase [Methanococcus maripaludis C6]
          Length = 1034

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN ++ +++ E        + A V+R 
Sbjct: 571 ALSAVVFDDTSYEKCMMHGFTLDETGEKMSKSLGNIVSPDDVTE-------QYGADVLRF 623

Query: 310 AMLMTH--YREPIDFTVQRLTEAEILLSKW 337
            +L  +  + E + F+   + E   +L+  
Sbjct: 624 YLLSANKAW-EDLRFSYSEMDETRSMLNTL 652


>gi|161830613|ref|YP_001596489.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082996|sp|A9NC49|SYL_COXBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161762480|gb|ABX78122.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 820

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 524 PVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPFIRL-LTQGMVLKDGAKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +T   L+       + + A  +RL ++      + ++++   +  A   L K 
Sbjct: 583 NVVTPQSLI-------KKYGADTVRLFIIFAAPPEQDLEWSDSGVEGAYRFLKKL 630


>gi|154706352|ref|YP_001424850.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|189082995|sp|A9KCQ4|SYL_COXBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154355638|gb|ABS77100.1| leucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 820

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 524 PVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPFIRL-LTQGMVLKDGAKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +T   L+       + + A  +RL ++      + ++++   +  A   L K 
Sbjct: 583 NVVTPQSLI-------KKYGADTVRLFIIFAAPPEQDLEWSDSGVEGAYRFLKKL 630


>gi|29653898|ref|NP_819590.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|48428541|sp|Q83DY1|SYL_COXBU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29541161|gb|AAO90104.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 820

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 524 PVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPFIRL-LTQGMVLKDGAKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +T   L+       + + A  +RL ++      + ++++   +  A   L K 
Sbjct: 583 NVVTPQSLI-------KKYGADTVRLFIIFAAPPEQDLEWSDSGVEGAYRFLKKL 630


>gi|294083991|ref|YP_003550748.1| arginyl-tRNa synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663563|gb|ADE38664.1| Arginyl-tRNA synthetase [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 572

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 66/351 (18%), Positives = 105/351 (29%), Gaps = 96/351 (27%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H  +AR  ++ D L  L+ +   +    Y  N       I+ R+        +
Sbjct: 133 PT--GPLHAAHARGAVIGDALAGLMAFSGWQVTKEYYVNDAGGQVDILARSVYLRYCEAL 190

Query: 93  NDAISI----------------ITSKNTQQFVK------------------------DTT 112
            D I I                + +K   +F K                        D  
Sbjct: 191 GDTIEIEAGLYPGAYLKDVGTKLAAKYGDKFHKRPEAEWLSTFRLFSVSDIMEGIKDDLQ 250

Query: 113 RLACLAPTHQ-PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
            L          R       +   I  +  +GH Y                G        
Sbjct: 251 ALGIQMDRFSSERELVESGAVQKAIDKLKANGHVYT---------------GVL------ 289

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY----- 226
            Q    + PE +  +    F    RST      + P  +    W    S +S H+     
Sbjct: 290 -QPPKGKEPEDWEPREQLLF----RSTEFGDDTDRPLQKSNGSWTYFASDVSYHFDKLER 344

Query: 227 -LGKVFDI----HGGGLDLIFPHHENEIAQSCCADRIEKTANI-WIHNGFLNLEGR--KM 278
             G + DI    HGG L  +        A        +   +I +     L   G+  KM
Sbjct: 345 TKGPLIDILGVDHGGYLKRM-------TAAVEAISGQKNMLDIRFCQLVNLMENGKPVKM 397

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           SK  GNF+T+ ++++          + VIR  ML     + +DF   ++TE
Sbjct: 398 SKRAGNFVTVRDVIDAVG-------SDVIRFIMLTRRNDQTLDFDYAKVTE 441


>gi|212212949|ref|YP_002303885.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238064865|sp|B6J1B2|SYL_COXB2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212011359|gb|ACJ18740.1| leucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 820

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 524 PVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPFIRL-LTQGMVLKDGAKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +T   L+       + + A  +RL ++      + ++++   +  A   L K 
Sbjct: 583 NVVTPQSLI-------KKYGADTVRLFIIFAAPPEQDLEWSDSGVEGAYRFLKKL 630


>gi|206889557|ref|YP_002248229.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741495|gb|ACI20552.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 642

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 36/111 (32%), Gaps = 11/111 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D+L R +R    +    +    TD   + +ERA  +        
Sbjct: 16  VNDIPHIGHAYTTIAADILARYMRLKGRK---VFFLTGTDEHGQKVERAALQK-----GK 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHG 143
                     + F      L         R T   H   +  ++Q +   G
Sbjct: 68  TPKEHADIMVENFKTLWKGLNISN-DAFIRTTDEEHKRIVQEILQRLYDKG 117



 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE---- 318
           NI+ H G+  ++G+KMSKS GN +  +E++       + +     R  +     RE    
Sbjct: 285 NIFAH-GWWTVKGKKMSKSLGNVVNPSEVI-------KKYGVDAFRYFLF----REVSFG 332

Query: 319 -PIDFTVQRL 327
              DF+ + L
Sbjct: 333 LDGDFSEEAL 342


>gi|116513122|ref|YP_812029.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116108776|gb|ABJ73916.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 880

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 70/193 (36%), Gaps = 28/193 (14%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            W +   +   W S   W     GW  E SA    Y   
Sbjct: 424 EMYVGEEAPEGEG---------WTQYEDVLDTWFSSALWPFSTMGWPDENSADFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS          N+ IH    + EGRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDEEGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST----- 342
           +++E        + A  +R  +        + + F+  ++  A   ++K    S      
Sbjct: 533 DVIE-------KYGADALRWFLSNGSAP-GQDVRFSYDKMDAAWNFINKIWNVSRYILMN 584

Query: 343 SKGIIDPAVLSAL 355
           ++ +   AV SAL
Sbjct: 585 AEDVSADAVSSAL 597


>gi|198282848|ref|YP_002219169.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|198247369|gb|ACH82962.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
          Length = 937

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +        +  H   ++ EGRKMSKS GN I    +++        + A ++RL +
Sbjct: 580 SVASRGRAPYRAVLTHGFTVDGEGRKMSKSVGNVIAPQTIIDR-------YGADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YR  I  +   L +      +   T+ 
Sbjct: 633 ASEDYRSEIPISDTILQQLGDSYRRIRNTAR 663


>gi|166363857|ref|YP_001656130.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|189082327|sp|B0JSP4|SYI_MICAN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166086230|dbj|BAG00938.1| isoleucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 952

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 20/141 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A+ I     +  H   L+ +GRKMSKS GN I  N ++   K   +   +   VIRL
Sbjct: 578 SVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVIDPNVIINGGKDQKKEPAYGVDVIRL 637

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
            +    Y   ++     L +   + +K   T+         +L +L +            
Sbjct: 638 WVSSVDYTNDVNIGQNILKQLVDIRNKIRNTAR-------FLLGSLND-----------F 679

Query: 370 KLARESTKNHDLLPIFNASAH 390
              +++    DL  I     H
Sbjct: 680 DPVKDAVAYEDLPEIDRYMLH 700


>gi|157415439|ref|YP_001482695.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|172047154|sp|A8FMN1|SYR_CAMJ8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157386403|gb|ABV52718.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307748081|gb|ADN91351.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932319|gb|EFV11262.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 530

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/321 (19%), Positives = 106/321 (33%), Gaps = 57/321 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLILIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVIDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLT 328
           R   L       ++F +  L 
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQ 403


>gi|254191170|ref|ZP_04897675.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938843|gb|EDO94513.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 967

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       +  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 615 CAADGRAPFRAVLTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 667

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 668 STDYAAEMSISDEILERVVETYRRMRNT 695


>gi|258404453|ref|YP_003197195.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257796680|gb|ACV67617.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 648

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 11/123 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D + R  R    E    ++    +  DKI++ A           
Sbjct: 13  VNANPHLGHAYTTIVADCVNRFHRLLGQE--TFFLTGTDEHGDKIVQAAED------AGQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
           +      + + +F +    L         R T  +H   +   +Q +  +G  Y      
Sbjct: 65  SPQEYVDRISSKFQQQLPDLNISN-DRFIRTTDSDHKDCVQRFLQQVYDNGDIYFGEYGG 123

Query: 153 IFD 155
            + 
Sbjct: 124 YYC 126


>gi|238487428|ref|XP_002374952.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|317143581|ref|XP_001819562.2| leucyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
 gi|220699831|gb|EED56170.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 1129

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 66/226 (29%), Gaps = 66/226 (29%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 716 PLDVRVSGKDLIQNHLTFFLYIHVALFPPEYWPRGVRANGHLLLNGEKMSKSTGNFLTLK 775

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + ++        + A   R+A                + +A      + +T  +  I+  
Sbjct: 776 DSVD-------KFGADATRIAFADAG---------DGIEDA-----NFDETVANSNILR- 813

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                          +  L +   E +K+  L                    +K  +  +
Sbjct: 814 ---------------LHTLKEWVEEISKDETLRT-----------GPADAFWDKIFNNEM 847

Query: 410 EKLVQERLILLK---MKKFSSA------------DYIRKQLESKGF 440
             LV+E     K      F  A            D  R+   S G 
Sbjct: 848 NGLVRE---ARKHYQNTDFKLALKSGLYDLVSARDTYREAATSAGV 890


>gi|218667361|ref|YP_002425048.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|218519574|gb|ACK80160.1| isoleucyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 937

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +        +  H   ++ EGRKMSKS GN I    +++        + A ++RL +
Sbjct: 580 SVASRGRAPYRAVLTHGFTVDGEGRKMSKSVGNVIAPQTIIDR-------YGADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YR  I  +   L +      +   T+ 
Sbjct: 633 ASEDYRSEIPISDTILQQLGDSYRRIRNTAR 663


>gi|167044058|gb|ABZ08743.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG4H17]
          Length = 951

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 24/123 (19%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +                + NG + ++G+KMSKS GN I + E +   
Sbjct: 578 SGRDLVPNHLTFFVLNHVAIFPENNWPQQIVVNGSVLMDGKKMSKSMGNIIPLREAV--- 634

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
               R + A  IRL +L          + + L +A+  +                 L+++
Sbjct: 635 ----RKYGADPIRLTIL---------ISAELLQDADFNVEAIKGIKNK--------LASM 673

Query: 356 YND 358
           Y D
Sbjct: 674 YED 676


>gi|124516135|gb|EAY57643.1| Leucyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 828

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 15/117 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +         D  E      +  G +  +G KMSKS G
Sbjct: 529 PVDQYIGGVEHAILHLLYSRFFTRALKDLGFVDSPEPF-RALLTQGMVLKDGSKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           N +  ++L+E        + A  +RL  +      + + +  + +  A   L +  Q
Sbjct: 588 NVVDPDQLIER-------YGADTVRLFTLFSAPPDKDLAWDDKAVEGAYRFLGRLYQ 637



 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 38/135 (28%), Gaps = 15/135 (11%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            PS    Y     P      H+G+ R   + D L R  R       V +           
Sbjct: 29  QPSKKTFYCLEMFPYPSGRIHMGHVRNYSIGDALARYKRMRGFN--VLHPMGWDSFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      I      ++ T +N     +  +RL  L+       T  +P+     Q  
Sbjct: 87  ENAA------IQRGIHPAVWTEQNIAHMKEQLSRLG-LSYDWSREVTTCLPEYYRWNQWF 139

Query: 138 --NIILHGHAYEANN 150
                  G AY+   
Sbjct: 140 FLKFYEKGLAYKKEG 154


>gi|329296598|ref|ZP_08253934.1| isoleucyl-tRNA synthetase [Plautia stali symbiont]
          Length = 939

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN +   ++++          A ++RL 
Sbjct: 577 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMDKLG-------ADILRLW 629

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 630 VASTDYSGEMAVSDEILKRAADSYRRIRNTAR 661


>gi|329895216|ref|ZP_08270880.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328922454|gb|EGG29796.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 934

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +     +  H   ++ +GRKMSKS GN ++I E           W A ++RL +  T
Sbjct: 577 AYGMAPYKAVLTHGFTVDDQGRKMSKSLGNILSIKEA-------SNKWGADILRLWVAAT 629

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST 342
            YR  + F  +          +   T+ 
Sbjct: 630 DYRGEVAFGDEIFNRTSDAYRRIRNTAR 657


>gi|219118358|ref|XP_002179954.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217408211|gb|EEC48145.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 676

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            L+      +  LV+ER      + F++AD IR +LE++
Sbjct: 451 DLSDEEVAIVTSLVEERDQAKGKRDFATADEIRDELEAR 489



 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 16/139 (11%)

Query: 323 TVQRLTEAEILLSKWPQTSTSKGI-IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
           T ++L   E LLS+      ++   +   +   L ND N       +    R+ +   D 
Sbjct: 299 TSEQLQSIENLLSRRSGAKQTRNYRVADDIRDELKNDFNVF-----IEDRLRQWSVGGDF 353

Query: 382 LPI---FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
            P    F+       I    + +       I   +++R    K + F +AD IR  L   
Sbjct: 354 GPDQPGFDDMNRSYTISAHSQPVTPADEALIITELEKRSEAKKSRDFETADAIRDNL--- 410

Query: 439 GFILEDYKNPDNGQRMTRW 457
                D  N     R+  W
Sbjct: 411 ----MDNFNVAVNDRLREW 425



 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 9/53 (16%)

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESK-GFILEDYKNPDNGQRMTRWK 458
             +  L+  RL   K  +F  AD IR  L    G  +          R   W+
Sbjct: 111 ETVNSLIAARLQARKTGQFEEADGIRDDLLKIHGVSV--------WDREKTWR 155



 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILED 444
           E L      +IE L+  R    + + +  AD IR +L+      +ED
Sbjct: 296 EVLTSEQLQSIENLLSRRSGAKQTRNYRVADDIRDELKNDFNVFIED 342



 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/41 (31%), Positives = 21/41 (51%)

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
              I  L+ ERL     ++F  AD +++QL S G  + D +
Sbjct: 213 EDEIHALLAERLQYKMSRQFQDADRVQEQLLSNGVYVHDAR 253



 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAH--ILG-IEVCKEHLNKNISIAIEKLVQ 414
           D  T   I+   + AR S K  D    +   +   +   +       +++  + I+K + 
Sbjct: 475 DFATADEIRDELE-ARFSVKVDDRSREWRVMSDDYVFSPLAGGDHGFDEDTIVYIQKQLA 533

Query: 415 ERLILLKMKKFSSADYIRKQLES 437
            RL+    + + +AD +R +L  
Sbjct: 534 LRLVHKTNRDYEAADEVRDELRD 556


>gi|153207783|ref|ZP_01946383.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212218820|ref|YP_002305607.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238064864|sp|B6J863|SYL_COXB1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120576335|gb|EAX32959.1| leucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013082|gb|ACJ20462.1| leucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 820

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 524 PVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPFIRL-LTQGMVLKDGAKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +T   L+       + + A  +RL ++      + ++++   +  A   L K 
Sbjct: 583 NVVTPQSLI-------KKYGADTVRLFIIFAAPPEQDLEWSDSGVEGAYRFLKKL 630


>gi|310796071|gb|EFQ31532.1| leucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 1116

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 705 PLDLRSSGKDLIGNHLTFFLYIHLAMFTPEYWPRGIRTNGHLMLNGEKMSKSTGNFMTLQ 764

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           ++        R + A   R+ +
Sbjct: 765 DV-------ARKFGADAARIGL 779


>gi|271502098|ref|YP_003335124.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270345653|gb|ACZ78418.1| isoleucyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 941

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 11/107 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  ++++          A ++RL 
Sbjct: 580 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMDKLG-------ADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLS 353
           +  T Y   I  + + L  +     +   T+     +    DPA+ S
Sbjct: 633 IGSTDYSGEIAVSDEILKRSADAYRRIRNTARFLLANLNGFDPALHS 679


>gi|194476636|ref|YP_002048815.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
 gi|171191643|gb|ACB42605.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Paulinella
           chromatophora]
          Length = 878

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 48/158 (30%), Gaps = 16/158 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R  ++ DV+ R  R     K V +              A      I      S  
Sbjct: 56  HMGHVRNYVITDVIARAQRMRG--KRVLHPMGWDAFGLPAENAA------IERGIDPSKW 107

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T+ N QQ  K   +L  L+   +   +          Q         G AY+    + +D
Sbjct: 108 TNTNIQQMRKQLDQLG-LSIDWEREISTCNEDYYRWTQWLFLQFYDAGLAYQQEATVNWD 166

Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
                     +  +++      R   K  K+    + L
Sbjct: 167 PIDQT---VLANEQVNGDGCSWRSGAKVEKRKLRQWFL 201


>gi|165919091|ref|ZP_02219177.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917225|gb|EDR35829.1| leucyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 819

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 523 PVDQYIGGIEHAVMHLLYARFMHKILRDLGLLNSNEPFIRL-LTQGMVLKDGAKMSKSKG 581

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +T   L+       + + A  +RL ++      + ++++   +  A   L K 
Sbjct: 582 NVVTPQSLI-------KKYGADTVRLFIIFAAPPEQDLEWSDSGVEGAYRFLKKL 629


>gi|159030898|emb|CAO88579.1| ileS [Microcystis aeruginosa PCC 7806]
          Length = 952

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 20/141 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A+ I     +  H   L+ +GRKMSKS GN I  N ++   K   +   +   VIRL
Sbjct: 578 SVAANGIAPYKTVLTHGFVLDEQGRKMSKSLGNVIDPNVIINGGKDQKKEPAYGVDVIRL 637

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
            +    Y   ++     L +   + +K   T+         +L +L +            
Sbjct: 638 WVSSVDYTNDVNIGQNILKQLVDIRNKIRNTAR-------FLLGSLND-----------F 679

Query: 370 KLARESTKNHDLLPIFNASAH 390
              +++    DL  I     H
Sbjct: 680 DPVKDAVAYEDLPEIDRYMLH 700


>gi|152991025|ref|YP_001356747.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166229752|sp|A6Q4I1|SYI_NITSB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151422886|dbj|BAF70390.1| isoleucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 918

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 18/138 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   ++      I  H   ++ +G KMSKS GN +   ++        + +   ++RL +
Sbjct: 580 SGAIEKRAPFKAILTHGFTVDEKGEKMSKSKGNVVAPMDV-------AKKYGVEILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA-IQALHK 370
            M+ Y+  +  +   L +      K   T           + A  NDL T+ +    L +
Sbjct: 633 AMSDYQSDLKISDNILKQIAEQYRKLRNTFR--------FMLANINDLETIQSDFGVLDR 684

Query: 371 --LARESTKNHDLLPIFN 386
             LA+  +   ++   F 
Sbjct: 685 WILAKAKSVFEEVEKQFK 702


>gi|254418324|ref|ZP_05032048.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
 gi|196184501|gb|EDX79477.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
          Length = 849

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 43/143 (30%), Gaps = 13/143 (9%)

Query: 18  FQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F   D    + YV    P      H+G+AR  ++ DV+ R  R    +  V +     D 
Sbjct: 23  FVTKDTGRPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARSKRAQGYD--VLHPMGW-DA 79

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQM 132
                E A  E    P        T  N  Q       L       +  AT    +  + 
Sbjct: 80  FGMPAENAAMERGIHPKG-----WTYDNIAQMRDQLKLLGLSLDWSREFATCDPEYYGKQ 134

Query: 133 IYLIQNIILHGHAYEANNEIIFD 155
                 +   G  Y  +  + +D
Sbjct: 135 QAWFLELYRRGLVYRKDGVVNWD 157


>gi|312142731|ref|YP_003994177.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903382|gb|ADQ13823.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 652

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 52/159 (32%), Gaps = 20/159 (12%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           YV  P  Y  D  HIG+A   +  D + R  + +  +        +T  D+      + E
Sbjct: 7   YVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMHGYDTMF-----LTGSDEH---GQKIE 58

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGH 144
             +            +    F +   +L      +  R T   H   +  + + +   G 
Sbjct: 59  RKAAAEGKDTKEYVDEIVASFKELWKKLDIDY-DYFIRTTEERHEKVVQKIFKKLYDKGD 117

Query: 145 AYEA--NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            Y+            S      +S R+++E++     P+
Sbjct: 118 IYKGKYEGWYCTPCESF-----WSERQLEEEQGEKVCPD 151


>gi|83767421|dbj|BAE57560.1| unnamed protein product [Aspergillus oryzae]
          Length = 1129

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 42/226 (18%), Positives = 66/226 (29%), Gaps = 66/226 (29%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 716 PLDVRVSGKDLIQNHLTFFLYIHVALFPPEYWPRGVRANGHLLLNGEKMSKSTGNFLTLK 775

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + ++        + A   R+A                + +A      + +T  +  I+  
Sbjct: 776 DSVD-------KFGADATRIAFADAG---------DGIEDA-----NFDETVANSNILR- 813

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                          +  L +   E +K+  L                    +K  +  +
Sbjct: 814 ---------------LHTLKEWVEEISKDETLRT-----------GPADAFWDKIFNNEM 847

Query: 410 EKLVQERLILLK---MKKFSSA------------DYIRKQLESKGF 440
             LV+E     K      F  A            D  R+   S G 
Sbjct: 848 NGLVRE---ARKHYQNTDFKLALKSGLYDLVSARDTYREAATSAGV 890


>gi|117927385|ref|YP_871936.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
 gi|117647848|gb|ABK51950.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
          Length = 539

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 41/135 (30%), Gaps = 12/135 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R         +    TD   + + R+ Q   + P   
Sbjct: 14  VNDAPHIGHAYTTVAADVLARWHRQRG---EPVWFLTGTDEHGQKVLRSAQAGGASPQEW 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
           A  ++       + +    L         R T   H  ++   +Q +   G  YE     
Sbjct: 71  ADRLVAEAWQPTWRE----LDISYDDF-IRTTEPRHTGRVQAFLQRLYEKGEIYEGVYEG 125

Query: 151 EIIFDTSSIPNYGSF 165
                       G  
Sbjct: 126 PYCVACEEFKLPGEL 140


>gi|125625212|ref|YP_001033695.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|124494020|emb|CAL99020.1| ValS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300072022|gb|ADJ61422.1| valyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 880

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 459 GWPDENSADFKRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   +++E        + A  +R  +        + + F+  ++  A 
Sbjct: 517 EGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYDKMDAAW 568

Query: 332 ILLSKWPQTST-----SKGIIDPAVLSAL 355
             ++K    S      ++ +   AV SAL
Sbjct: 569 NFINKIWNVSRYILMNAEDVSADAVSSAL 597


>gi|78044545|ref|YP_359254.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|123729620|sp|Q3AF30|SYL_CARHZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77996660|gb|ABB15559.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 821

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 60/173 (34%), Gaps = 37/173 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N+ +  G +  +G KMSKS G
Sbjct: 531 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGLVHVDEPFTNL-LTQGMVLKDGAKMSKSKG 589

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++  E++E        + A   RL +L        ++++ Q +  +   L++ W    
Sbjct: 590 NVVSPEEIVE-------KYGADTARLFILFAAPPERDLEWSDQGVEGSFRFLNRVWRLIY 642

Query: 342 TSKGIIDPAVLSALYND---------------------LNTVSAIQALHKLAR 373
            +K  I   +      D                      N  +AI A+ +L  
Sbjct: 643 QTKDRISDELREFSAKDKELNRLLHATIKKVTEDIEERFNFNTAISAIMELVN 695



 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 47/159 (29%), Gaps = 29/159 (18%)

Query: 3   KKIKIYNTLERKITEF--QAIDPSNIRMYVC---GPTVYDFAHIGNARPMIVFDVLYRLL 57
           +++K+Y     ++ +F  +         Y C    P      H+G+ R   + DV+ R  
Sbjct: 19  EELKLY-----EVDDFSEKPK-------YYCLEMFPYPSGKLHMGHVRNYSIGDVVARYK 66

Query: 58  RYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
           R       V +              A +       N   +  T  N     +    L   
Sbjct: 67  RMRGY--AVLHPMGWDAFGLPAENAAIKHG-----NVHPADWTWDNIANMRRQLKELGIS 119

Query: 118 APTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI 152
               +  AT H P+     Q         G AY+    +
Sbjct: 120 YDWRREIATCH-PEYYRWTQWLFLQFYKKGLAYKKKAPV 157


>gi|303248045|ref|ZP_07334311.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490602|gb|EFL50507.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 552

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/388 (16%), Positives = 115/388 (29%), Gaps = 74/388 (19%)

Query: 12  ERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
            R   EF + +P+       GP      HIG+ R   V D L R+LR         Y  N
Sbjct: 116 TRIQVEFVSANPT-------GP-----LHIGHGRGAAVGDSLARVLRAAGFAVETEYYIN 163

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR---------LACLAPTHQ 122
                 +I+ ++            ++         +VK+  R         L  L     
Sbjct: 164 DAGRQMRILGQSILYRCRELAGKDVTEPEDYYRGDYVKELARELLDREGEGLLDLPED-- 221

Query: 123 PRATNHI-----PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
            +AT+        +++  I+  +     +   +++ F  S +   G+ + R  D+ +   
Sbjct: 222 -KATDICRLYGEKEILDGIKKDLRE---FRVGHDVWFPESKLFAAGAVA-RTFDDLRAKN 276

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFDIHG 235
              +K          LW  +T      +       G   +     A       + FD+  
Sbjct: 277 LAYDKDG-------ALWFATTNFGDDKDRVLVKSGGDLTYFASDIAYHDDKFRRGFDVVV 329

Query: 236 G--GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-------EGRKMSKSNGNFI 286
              G D    HH        C   + +     +    + L       E   MS   G F 
Sbjct: 330 DIWGAD----HHGYVPRMKACVAALGRDPETSLKVILVQLVNLLKGGEQIAMSTRAGKFE 385

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE------------AEILL 334
           T+ +++           A   R   L       +DF +  + E            A   +
Sbjct: 386 TLADVVAEVG-------ADAARFMFLSRKSDSHLDFDLDAVKEKSMDNPVYYVQYAHARV 438

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTV 362
                 +  +G+        L + L+T 
Sbjct: 439 KSLFAKAAERGVTPREATPELLSKLDTP 466


>gi|55379275|ref|YP_137125.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579285|sp|Q5UZ84|SYI_HALMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55232000|gb|AAV47419.1| isoleucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 1074

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 72/193 (37%), Gaps = 31/193 (16%)

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           ++  S  A        + +H      +GR MSKS G  I  +E++E             +
Sbjct: 576 QLGMSTAATGEIPYKQVLMHGYANMPDGRGMSKSKGVLIDPHEVIEKHGRDP-------M 628

Query: 308 RLAMLM-THYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAV--LSALYND 358
           RL +L  T   E ++F+ +   E +  L+      ++P         DP    +  L +D
Sbjct: 629 RLFLLSVTAQGEDMNFSWEETAEMQRRLNILWNVARFPLPYMRADDFDPEETTVEDLRDD 688

Query: 359 LNTVS--AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQER 416
           L  V    +  L  +    T + D      A   +L      E + +++S    ++V+ER
Sbjct: 689 LELVDEWVLSRLQSVTEAMTDSMDDFENDKAVDELL------EFVVEDVSRFYIQVVRER 742

Query: 417 LILLKMKKFSSAD 429
           +       +   D
Sbjct: 743 M-------WEEED 748


>gi|169831567|ref|YP_001717549.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|254782388|sp|B1I4A3|SYI_DESAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169638411|gb|ACA59917.1| isoleucyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 930

 Score = 49.1 bits (116), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +GRKMSKS GN I   E+L       +   A ++RL +
Sbjct: 575 AVAVTGEPPYRAVLTHGFVVDEQGRKMSKSLGNVIEPMEVL-------KELGADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR  +  +   L +      K   T
Sbjct: 628 CSADYRGDLAVSPGILKQMSEAYRKIRNT 656


>gi|323935077|gb|EGB31444.1| isoleucyl-tRNA synthetase [Escherichia coli E1520]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|325963761|ref|YP_004241667.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469848|gb|ADX73533.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 520

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     V  +T  D+  ++ A+    +         
Sbjct: 22  PHIGHAYEYIATDAMARFKRLDGYD-----VMFLTGTDEHGMKIAQ---TAEKEGITPKE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N + +      L         R T  +H      + + +  +G  Y +  E  +  
Sbjct: 74  LVDRNAEVYKAAHAALGITY-DRFIRTTDADHYAASQAIWKKMEANGDIYLSKYEGWYSV 132

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 133 RDEAFYGE 140



 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 55/178 (30%), Gaps = 30/178 (16%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    + IH GFL+  G KMSKS GN +   + 
Sbjct: 262 DVHIIGKDISRFHAIYWPAFLMSA-GLELPKRVMIH-GFLHNNGVKMSKSLGNVVAPADF 319

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THYRE---------PIDFTVQRLTEAEILLS 335
           +         +    +R   L          Y            +      L  A+  LS
Sbjct: 320 VA-------QYGLDQVRYFFLREVPFGADGSYNHDAIVGRMNADLANNFGNL--AQRSLS 370

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
              +    +  +     +A    L   +    L +  R      +      A   +LG
Sbjct: 371 MVAKNCEGRVPVPGEFTAADNAILAQANG---LLQTVRAVFDKQEFSRALEAVWGVLG 425


>gi|309700239|emb|CBI99527.1| isoleucyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|148244477|ref|YP_001219171.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166229778|sp|A5CX61|SYI_VESOH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146326304|dbj|BAF61447.1| isoleucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 955

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   ++     N+  H   ++ +G+KMSKS GN I+  +++           A ++RL +
Sbjct: 568 SVAINKKAPYKNVLTHGFVVDKDGKKMSKSLGNIISPQKIVNNVG-------ADILRLWI 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y   +  + + L  +     +   T
Sbjct: 621 ASTDYTGEMTVSDEILKRSADSYRRIRNT 649


>gi|332341356|gb|AEE54690.1| isoleucyl-tRNA synthetase IleS [Escherichia coli UMNK88]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|71029168|ref|XP_764227.1| leucyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68351181|gb|EAN31944.1| leucyl-tRNA synthetase, putative [Theileria parva]
          Length = 1158

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 19/117 (16%)

Query: 235 GGGLDLIFPHHENEI----AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
             G DL+F H    +    A        +     +  NG + +   KMSKS GNF+TI E
Sbjct: 718 CSGKDLLFNHLTMSLFIHNAIWE---SNDYMPRSYFCNGHVLVNSEKMSKSKGNFLTIEE 774

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSK 344
            +         + A   R+A+      + +D   F+      + + L  + QT+   
Sbjct: 775 SIN-------QYTADGTRIALADAG--DTLDDANFSKDTAESSILKLYNFLQTTIQD 822


>gi|222824086|ref|YP_002575660.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782949|sp|B9KCX0|SYR_CAMLR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|222539308|gb|ACM64409.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 531

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 68/411 (16%), Positives = 121/411 (29%), Gaps = 93/411 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-------------ITDIDDKI 79
           PT     HIG+AR  I  D L R+ R+   +    Y  N             +  + +  
Sbjct: 115 PT--GPLHIGHARGAIFGDTLTRVARHLGYKFDTEYYVNDAGNQIYLLGLSILLAVKEHC 172

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
           ++   Q        + I  +  +   +F KD      +       A     +M+ +I+  
Sbjct: 173 LKEQVQYPDEYYKGEYIIDVAKEAFAEFEKDF----FVEENIPQLALWAKDKMLKIIKQN 228

Query: 140 ILHGH----AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
           +        AY +      +  +            +  + G        K +  D ++ K
Sbjct: 229 LADAKIFIDAYVSETSYYSELENTLKALKEHGGTYE--QDGKIWLASSVKGDEKDRVIIK 286

Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH----GGGLDLIF-----PHHE 246
                        G+G              YL      H      G D         HH 
Sbjct: 287 -----------DDGKG-------------TYLAADIVYHKDKMSRGYDKCINIWGADHHG 322

Query: 247 NEIAQSCCA---DRIEKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGG 299
             IA+   A      +      I    ++L   G   KMSK  GNFI + ++LE      
Sbjct: 323 Y-IARMKAAMEFLGHDSQNLEIILAQMVSLLKNGEPYKMSKRAGNFILMGDVLEELG--- 378

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQR------------LTEAEILLSK-WPQTSTSKGI 346
               + V+R   +       ++F V              +  A   + + + +   S   
Sbjct: 379 ----SDVLRYIFISKKCDTHLEFDVDEFKKEDSSNPVYYINYAHARIHQVFAKAGKSVDD 434

Query: 347 IDPAVLSALYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           +  A   +L  D       +++    L+    +R   K  D L    +  H
Sbjct: 435 VMYAKFESLNEDGMNLLFESLNLKAVLNDAFESRSLQKIPDYLKNLASLFH 485


>gi|261338976|ref|ZP_05966834.1| hypothetical protein ENTCAN_05179 [Enterobacter cancerogenus ATCC
           35316]
 gi|288318805|gb|EFC57743.1| isoleucine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|259907374|ref|YP_002647730.1| isoleucyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224962996|emb|CAX54479.1| Isoleucyl-tRNA synthetase 1 [Erwinia pyrifoliae Ep1/96]
 gi|283477205|emb|CAY73112.1| ileS [Erwinia pyrifoliae DSM 12163]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN I+  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTISPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYSGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|117927941|ref|YP_872492.1| hypothetical protein Acel_0733 [Acidothermus cellulolyticus 11B]
 gi|117648404|gb|ABK52506.1| conserved hypothetical protein [Acidothermus cellulolyticus 11B]
          Length = 260

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 36/110 (32%), Gaps = 10/110 (9%)

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDP 349
            R       RLA+   HY  P+      L  A+  L+ W     +               
Sbjct: 146 PRDADPLAQRLALSARHYARPVLLDHSHLAAAQADLTAWRSAVAAWADCPSAPVPAEYVQ 205

Query: 350 AVLSALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNASAHILGIEVCK 398
           A   AL +DL+    +  L   A +    +      F     +L IE+C+
Sbjct: 206 AARQALEDDLDLPRVVDLLRAAAADPRLPDGAKFETFAYLDRVLAIELCR 255


>gi|291320317|ref|YP_003515579.1| leucyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752650|emb|CBH40623.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma
           agalactiae]
          Length = 779

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN ++  +LLE        + A  +RL +L      + ++++ 
Sbjct: 530 LTQGMVLKDGAKMSKSKGNTVSPTDLLE-------KYGADTVRLFILFAAPPAKELEWSD 582

Query: 325 QRLTEAEILLSKWPQT 340
             +      +++    
Sbjct: 583 DSVEGCNRFINRLFNL 598


>gi|121534787|ref|ZP_01666607.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306582|gb|EAX47504.1| leucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 826

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 36/144 (25%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++  E++         + A   RL +L      
Sbjct: 565 EPFKNL-LTQGMVIKDGAKMSKSKGNVVSPEEIIG-------KYGADTARLFILFAAPPE 616

Query: 318 EPIDFTVQRLTEAEILLSKW--------PQTSTSKGIIDPAV---------------LSA 354
             ++++ Q +  A   L +         P    +    DPAV               +  
Sbjct: 617 RDLEWSDQGVEGAFRFLGRLWRIVHHYAPVAGAADESYDPAVLGPEERELRRVLHSTIKK 676

Query: 355 LYND----LNTVSAIQALHKLARE 374
           +  D     N  +AI A+ +L   
Sbjct: 677 VTEDIGERFNFNTAISAIMELVNA 700


>gi|153951097|ref|YP_001397796.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166231594|sp|A7H2R6|SYL_CAMJD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152938543|gb|ABS43284.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 809

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/240 (17%), Positives = 85/240 (35%), Gaps = 36/240 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                  + E    + +  G +  +G KMSKS G
Sbjct: 527 SVDQYIGGIEHAILHLLYARFFQKALRDLGYLTQNEPFDRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A   RL ML      + +++    +  A   + K    + 
Sbjct: 586 NVVDPDEIIE-------KYGADTARLFMLFAAPPAKELEWNDDAVEGAYRFICKLYDRAQ 638

Query: 343 S--KGIIDPAVLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI- 394
           +  KG +       L  +     L    A++   ++  +S   + L+     + + L + 
Sbjct: 639 NIKKGELVELKQENLNKEEKYARLKVYEALKKSEEVYHQSFAFNTLIAACMEALNALALC 698

Query: 395 --EVCKEHLNKNISIAIEKLV-----QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             E  ++     I   +E ++     +    L K K F        +L+ +   ++D  N
Sbjct: 699 KNEALEQEAFYIILNILEPIIPHVCFELSEELFKCKNFKK-----LELKEE-VFVKDTLN 752


>gi|61680214|pdb|1WKB|A Chain A, Crystal Structure Of Leucyl-Trna Synthetase From The
           Archaeon Pyrococcus Horikoshii Reveals A Novel Editing
           Domain Orientation
          Length = 810

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D    G DLI  H    I       R E        NGF  LEG+KMSKS GN +   
Sbjct: 603 PLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFI 662

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++    +    D+  + + +    + ++ +  +     +
Sbjct: 663 DAIEENG-------ADVVRLYIMSLAEHDSDFDWRRKEVGKLRKQIERFYELISQFAEYE 715

Query: 349 PAVLSALYNDLNTVSAIQA--LHKLARESTKNHDLLPIFNASAHI 391
                 L +       I    LH+L +   +  + L  F     +
Sbjct: 716 VKGNVELKD-------IDRWMLHRLNKAIKETTNALEEFRTRTAV 753



 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P +    H+G+AR   + DV+ R  R            +IT
Sbjct: 43 PYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHIT 83


>gi|61657413|emb|CAI44328.1| leucyl-tRNA synthetase [Thermotoga sp. RQ7]
          Length = 839

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 24/203 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 543 PVDQYIGGVEHAILHLLYSRFITKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 601

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++ ++++E        + A  +R+ +L M    +  +++   +      + + W    
Sbjct: 602 NVVSPDDMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFIRRLWNTFY 654

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQA---LHKLARESTKNHDLLPIFNASAHILGIEVCK 398
           T    +    +  L   L T    +    LH + ++ T   D+   F  +  I G+    
Sbjct: 655 TILPHVKEETVEGLS--LTTPVEKELRRKLHSIIKKIT--EDIEGGFKFNTAISGLMELI 710

Query: 399 EHLNKNISIAIEKLVQERLILLK 421
            HLN+ +S   E     R +L +
Sbjct: 711 NHLNQYLSGVPEDQWN-RKLLRE 732


>gi|328948995|ref|YP_004366332.1| Lysyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
 gi|328449319|gb|AEB15035.1| Lysyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
          Length = 538

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 101/343 (29%), Gaps = 93/343 (27%)

Query: 21  IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
               ++ +Y C  G T     HIGN R +I  D++ R LR         Y       DD 
Sbjct: 22  KQKGDLDLYTCASGITPSGTVHIGNFREIITVDLIVRALRDRGKNVRFIY-----SWDDY 76

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQ--------FVKDTTRLACLAPTHQ---PRATN 127
            + R       +P N     +  K  +         F +D           +   PR   
Sbjct: 77  DVFR------KVPGNMPQPEVLEKYLRYPITMVPDTFGRDENYARHHEVDIETQLPRVGI 130

Query: 128 HIPQMIYLIQNIILHGHA-------------------YEANN------EIIFDTSSIPNY 162
           H P+ +Y       + +A                   Y          ++ +  ++    
Sbjct: 131 H-PEFLYQASRYRANRYAEGMKKALQNRELIKECLNEYRDEQHKMKPEDVYWPVAAFC-- 187

Query: 163 GSFSRRKIDEQKMGTRVPE----------KYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
               +   DE ++     E           + +K        + S   + GW   W    
Sbjct: 188 ---CKCNKDETEILGYDGEYGVTYKCKACGHEEKGDL-----RTSKEFKLGWRVDWPMR- 238

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
             W+ E                 GG D I P    + A+          A + +   F+ 
Sbjct: 239 --WNEEKVVFEP-----------GGKDHISPGGSYDTAKLVSKKVFGWDAPVTMKYDFVK 285

Query: 273 LEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           L+G   KMS S G  I++ + LE        +   V+R    M
Sbjct: 286 LKGVPGKMSSSKGKVISLVDALEV-------YQPEVLRYIFAM 321


>gi|313902198|ref|ZP_07835606.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467533|gb|EFR63039.1| leucyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 868

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 47/129 (36%), Gaps = 16/129 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    + +  G +  +G KMSKS G
Sbjct: 533 PVDQYIGGIEHAVLHLLYSRFITKVLYDEGLVPSPEPFQRL-LTQGMVIKDGAKMSKSKG 591

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++  ++LE        + A   RL +L        ++++   +  A   + + W   +
Sbjct: 592 NVVSPEDILE-------EYGADATRLFILFAAPPERDLEWSEHGIEGASRFVHRVWRLVA 644

Query: 342 TSKGIIDPA 350
              G I  A
Sbjct: 645 GCAGAIRGA 653


>gi|237740543|ref|ZP_04571024.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229422560|gb|EEO37607.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 637

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 70/434 (16%), Positives = 125/434 (28%), Gaps = 110/434 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +         +V  + +   K+ + A Q         
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKSMG--MDTHFVTGLDEHGQKVEQAAEQHGF------ 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K T  F      L         R T   H   +  +++ +   G  Y+   E 
Sbjct: 66  TPQAWTDKMTPNFKNMWAALNIKYDDF-IRTTEERHKKAVKKILEIVHEKGDIYKGEYEG 124

Query: 153 IFDTS--------------SIPNYGS-FSRRKID----EQKMGTRVPEKYHKKNPADFIL 193
            +  S                P+ G   +  K +    +         K+  ++P DFIL
Sbjct: 125 KYCVSCETFFPENQLNGSNKCPDCGKELTVLKEESYFFKMSKYADALLKHIDEHP-DFIL 183

Query: 194 WKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLG 228
                     +            + +  G P      HI            ++       
Sbjct: 184 PHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAGFENDD 243

Query: 229 KVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
           K FD        +H  G D+I  H         C       K  +  + +G+   EG KM
Sbjct: 244 KKFDKFWNDARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFT-------------- 323
           SKS GN +             + +     R  +L   ++    D++              
Sbjct: 300 SKSKGNVV-------DPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLAN 352

Query: 324 ------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND-----------LNTVSAIQ 366
                  + L   +   +     S++   ID  V+ A++++                A++
Sbjct: 353 DLGNLLNRTLGMYKKYFNGVVVASSTSEEIDD-VIKAMFDETIKDVEKYMYLFEFSRALE 411

Query: 367 ALHKLARESTKNHD 380
            + K      K  D
Sbjct: 412 TIWKFISRLNKYID 425


>gi|154148135|ref|YP_001406805.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153804144|gb|ABS51151.1| arginyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 525

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 65/391 (16%), Positives = 132/391 (33%), Gaps = 74/391 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R  +  D L R+  Y   +    Y  N  D  ++I            +
Sbjct: 115 PT--GPLHIGHVRGAVYGDTLQRVSNYLGYKMQTEYYIN--DAGNQID----------LL 160

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII-------LHGHA 145
             ++ +   +   +          + P    R   +I +++ + +              +
Sbjct: 161 GISMILRAKELAGE--------EVIYPDKYYR-GEYIDEILKIAKEKFGDEILKDEKKLS 211

Query: 146 YEANNEIIFDTSS-IPNYGSF-----SRRKI-DEQKMGTRVPEKYHKKNPADFILWKRST 198
             A +E++      + + G       S + + +E +   +  EK  K    +  +W  S 
Sbjct: 212 DFAKDEVLKIIKKDLADAGIEISNWISEKSLYNELEGTIKKLEKSGKMYEKEGKIWIASI 271

Query: 199 PMEPGWESPWGR--GRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHEN----EIA 250
                 +    R  GRP +        ++   + FD  I+  G D    HH      + A
Sbjct: 272 QNGDEKDRVVVREDGRPTYLAGDIIYHNNKFERNFDHYINIWGAD----HHGYVARLKAA 327

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
            +       +   + +    L   G   KMSK  GN + ++++LE             +R
Sbjct: 328 INFLGYDENRLEVVLMQMVSLLKNGETFKMSKRAGNVVLMSDILEEIGK-------DALR 380

Query: 309 LAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSAL 355
              +      P++F +  L +            A   +++ + +   +   I       L
Sbjct: 381 FIFISKSGNSPLEFDIDELKKEDSTNPIFYINYAHARVNQVFGKAGKNVEQIIDENFENL 440

Query: 356 YND-LN-TVSAIQALHKLARESTKNHDLLPI 384
             D LN    A++ L+++  E+ K+  L  I
Sbjct: 441 DEDALNLVFEALR-LNEILNEALKSRSLQKI 470


>gi|260892906|ref|YP_003239003.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865047|gb|ACX52153.1| isoleucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 916

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 17/124 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EGRKMSKS GN +   E++           A ++RL +
Sbjct: 573 AVAITGQPPYRAVLTHGFVVDEEGRKMSKSLGNVVDPQEVMTKLG-------ADILRLWV 625

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI--QALH 369
               YR  +  +   L +      K   T          +L+ LY D +   A+  + L 
Sbjct: 626 CSADYRGDLAASDNILRQVAEAYRKIRNTFR-------FLLANLY-DFDPAEALPYEQLL 677

Query: 370 KLAR 373
           +L R
Sbjct: 678 ELDR 681


>gi|310765126|gb|ADP10076.1| isoleucyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN I+  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTISPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYSGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|254573426|ref|XP_002493822.1| Cytosolic leucyl tRNA synthetase, ligates leucine to the
           appropriate tRNA [Pichia pastoris GS115]
 gi|238033621|emb|CAY71643.1| Cytosolic leucyl tRNA synthetase, ligates leucine to the
           appropriate tRNA [Pichia pastoris GS115]
 gi|328354357|emb|CCA40754.1| leucyl-tRNA synthetase [Pichia pastoris CBS 7435]
          Length = 1097

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 64/202 (31%), Gaps = 53/202 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I                  NG L L   KMSKS GNF+T++
Sbjct: 687 PLDISISGKDLIPNHLTFCIYVHTALFPKRFWPKGIRANGHLMLNNAKMSKSTGNFMTLH 746

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           +++E        + A   R+                 L +A           T    +D 
Sbjct: 747 QIVE-------KFGADAARI----------------ALADAGDT--------TEDANLDE 775

Query: 350 AVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
           +  +A         AI  L    + A E  KN D L               ++  +    
Sbjct: 776 SNANA---------AILRLFTFKEWAEEIVKNADSLRS----------GPIEKFFDVAFE 816

Query: 407 IAIEKLVQERLILLKMKKFSSA 428
             + +L++E      +  F SA
Sbjct: 817 NEMNRLIEETYEQYSLTNFKSA 838


>gi|255570956|ref|XP_002526429.1| leucyl-tRNA synthetase, putative [Ricinus communis]
 gi|223534209|gb|EEF35924.1| leucyl-tRNA synthetase, putative [Ricinus communis]
          Length = 1087

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    +               +  NG + L   KMSKS GNF T+ 
Sbjct: 670 PFDLRVSGKDLIQNHLTFCMYNHTAIMAKHHWPRGFRCNGHIMLNSEKMSKSTGNFRTLR 729

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   R ++
Sbjct: 730 QAIE-------EFSADATRFSL 744


>gi|224120062|ref|XP_002331127.1| predicted protein [Populus trichocarpa]
 gi|222872855|gb|EEF09986.1| predicted protein [Populus trichocarpa]
          Length = 1068

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 50/159 (31%), Gaps = 43/159 (27%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    +               +  NG + L   KMSKS GNF T+ 
Sbjct: 670 PFDLRVSGKDLIQNHLTFCVFNHTAIMAKHHWPRGFRCNGHIMLNSEKMSKSTGNFKTLR 729

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + ++                           +F+           +++       G+ D 
Sbjct: 730 QAID---------------------------EFSADA--------TRFSLADAGDGVDDA 754

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
             +        T +A  A+ +L +E     ++L    + 
Sbjct: 755 NFV------FETANA--AILRLTKEIAWIEEVLAAEASL 785


>gi|222099493|ref|YP_002534061.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221571883|gb|ACM22695.1| Leucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 839

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 24/203 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 543 PVDQYIGGVEHAILHLLYSRFITKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 601

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++ ++++E        + A  +R+ +L M    +  +++   +      + + W    
Sbjct: 602 NVVSPDDMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFIRRLWNTFY 654

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQA---LHKLARESTKNHDLLPIFNASAHILGIEVCK 398
           T    +    +  L   L T    +    LH + ++ T   D+   F  +  I G+    
Sbjct: 655 TILPHVKEETVEGLS--LTTPVEKELRRKLHSIIKKIT--EDIEGGFKFNTAISGLMELI 710

Query: 399 EHLNKNISIAIEKLVQERLILLK 421
            HLN+ +S   E     R +L +
Sbjct: 711 NHLNQYLSGVPEDQWN-RKLLRE 732


>gi|58584456|ref|YP_198029.1| methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58418772|gb|AAW70787.1| Methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 540

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV  R ++     K V +     +   KI + A+ +        
Sbjct: 16  VNDKPHIGHAYTSLICDVTARFMKLAG--KNVKFTTGTDEHGQKIEKAAKTKGMHPKEFT 73

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               ++ +   +F+               R T   H   ++ L   +   G  Y  +   
Sbjct: 74  DKVSVSFRKLAEFID-------FQYDDFIRTTEERHEKAVVALWDRLEERGQIYLDSYSG 126

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +  S    Y      ++ + K  T    ++ K+    F L
Sbjct: 127 WYSVSDEAFYQE---SELIDGKAPTGAEVEWVKEESYFFRL 164



 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 10/109 (9%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           + M+S+     F+IH  G D++  H     A    AD       I +H  +LN EG+K+S
Sbjct: 276 ARMTSNLADNSFNIHVIGKDILRFHAVYWPAILLAADLPLP-KQIVVHGWWLN-EGKKIS 333

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           KS GN I             + +    +R  +L    + +  +F+ + +
Sbjct: 334 KSLGNVI-------DPIALAKEFGVDQLRYFLLREASFGQDGNFSKKNM 375


>gi|71755079|ref|XP_828454.1| leucyl-tRNA synthetase [Trypanosoma brucei TREU927]
 gi|70833840|gb|EAN79342.1| leucyl-tRNA synthetase, putative [Trypanosoma brucei]
          Length = 1074

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 14/95 (14%)

Query: 222 MSSHYL-GKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           M   +L     D+   G DLI  H      N  A     D   K       NG + ++  
Sbjct: 669 MRREFLYWYPVDLRCSGKDLIQNHLTMFLYNHAAIW--PDDESKWPRSVFANGHVLVDNE 726

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           KMSKS GNF+T+ E +         + +   RLA 
Sbjct: 727 KMSKSKGNFMTLEEAIN-------EYGSDATRLAC 754


>gi|321265103|ref|XP_003197268.1| leucine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317463747|gb|ADV25481.1| Leucine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 1114

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 13/166 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         ++       NG L L G+KMSKS GNF+T+ 
Sbjct: 703 PLDVRSSGKDLIPNHLTFWIYCHTALFPEKQWPKAVRINGHLMLNGKKMSKSTGNFLTMK 762

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQTSTSKGI 346
           E           + +   RL +      + I   +F       A + L      +     
Sbjct: 763 EATN-------KYGSDATRLTLADAG--DDITDANFEETVANAAILRLHTCSTWAEEMKS 813

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
               + +  +ND +       +  L +E+    + +    A    L
Sbjct: 814 TKDQLRTGEWNDFD-RGFRAEMDALIKEAYGAFEQMEYKRALKAGL 858


>gi|302660650|ref|XP_003022002.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
 gi|291185926|gb|EFE41384.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
          Length = 975

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 41/155 (26%), Gaps = 24/155 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  +               D+   +   A     E+ +I      
Sbjct: 92  HMGHVRVYTISDVLARFKQMKGY-----------DVLHPMGWDAFGLPAENAAIERGIHP 140

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI 152
              T +N          L               P+     Q     +   G AY+A   +
Sbjct: 141 EGWTKQNIANMRNQLKDLGI-RFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVV 199

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                         +  ++D      R   K  K+
Sbjct: 200 NYDPVDKT----VLANEQVDSNGCSWRSGAKVEKR 230


>gi|302510571|ref|XP_003017237.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
 gi|291180808|gb|EFE36592.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
          Length = 975

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 41/155 (26%), Gaps = 24/155 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  +               D+   +   A     E+ +I      
Sbjct: 92  HMGHVRVYTISDVLARFKQMKGY-----------DVLHPMGWDAFGLPAENAAIERGIHP 140

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI 152
              T +N          L               P+     Q     +   G AY+A   +
Sbjct: 141 EGWTKQNIANMRNQLKDLGI-RFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVV 199

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                         +  ++D      R   K  K+
Sbjct: 200 NYDPVDKT----VLANEQVDSNGCSWRSGAKVEKR 230


>gi|58261734|ref|XP_568277.1| leucine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134118365|ref|XP_772196.1| hypothetical protein CNBM1150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50254804|gb|EAL17549.1| hypothetical protein CNBM1150 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57230450|gb|AAW46760.1| leucine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 1114

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 57/166 (34%), Gaps = 13/166 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         +        NG L L G+KMSKS GNF+T+ 
Sbjct: 703 PLDVRSSGKDLIPNHLTFWVYCHAALFPEKHWPKAVRANGHLMLNGKKMSKSTGNFLTMK 762

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQTSTSKGI 346
           E         + + +  +RL +      + I   +F       A + L      +     
Sbjct: 763 EA-------TKKYGSDAMRLTLADAG--DDITDANFEETVANAAILRLHTCSSWAEEMKS 813

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
               + +  +ND +       +  L +E+    + +    A    L
Sbjct: 814 TKDQLRTGEWNDFD-RGFRAEMDALIKEAYGAFEQMEYKRALKAGL 858


>gi|307132647|ref|YP_003884663.1| isoleucyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306530176|gb|ADN00107.1| isoleucyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 941

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  ++++          A ++RL 
Sbjct: 580 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMDKLG-------ADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 633 IGSTDYSGEIAVSDEILKRSADAYRRIRNTARFLLANLNGFDPA 676


>gi|296101200|ref|YP_003611346.1| isoleucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055659|gb|ADF60397.1| isoleucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|296242227|ref|YP_003649714.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094811|gb|ADG90762.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 503

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   +  DVL R  R    EK V ++              + +  +  +  
Sbjct: 13  PNGPPHIGHAYTTVYADVLARFARLI--EKDVFFLTG------NDEHGLKIQRFAEKLGK 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEI 152
               +  +    +     RL      +  R T+ + + + +   + +   G+ Y+     
Sbjct: 65  TPKEVVDEMAVIYRDYWLRLNISY-DYFIRTTDSVHEKVVMSSFEKLYRKGYVYKDKYGG 123

Query: 153 IFDTSSIPNY 162
           ++       Y
Sbjct: 124 LYCVDCEKYY 133


>gi|251788188|ref|YP_003002909.1| isoleucyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247536809|gb|ACT05430.1| isoleucyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 941

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  ++++          A ++RL 
Sbjct: 580 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMDKLG-------ADILRLW 632

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 633 IGSTDYSGEIAVSDEILKRSADAYRRIRNTARFLLANLNGFDPA 676


>gi|323702369|ref|ZP_08114034.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532675|gb|EGB22549.1| leucyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 827

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 65/197 (32%), Gaps = 42/197 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 529 SVDQYIGGVEHAILHLLYSRFFTKVFYDLGLVDVQEPFKNL-LTQGMVLKDGAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK------ 336
           N ++  E+++        + A   RL +L        ++++ + +  +   L++      
Sbjct: 588 NVVSPEEIVDR-------YGADTARLFILFAAPPERDLEWSDRGVEGSHRFLNRVWRLVY 640

Query: 337 -WPQTSTSKGIIDPA-----VLSALY-----------ND----LNTVSAIQALHKLARES 375
                  +   IDP      V   +             D     N  +AI  + +L    
Sbjct: 641 SVKDEVAAAPAIDPKANFVGVHKEMRRLTHYAIKKVTEDVSGRFNFNTAISTIMELVNGI 700

Query: 376 TKNHDLLPIFNASAHIL 392
               D +     ++ +L
Sbjct: 701 YTYRDKVAAVERNSSVL 717


>gi|290559069|gb|EFD92442.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 483

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 63/173 (36%), Gaps = 42/173 (24%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEK---TANIWIHNGFLNLEGRKMSKSNGNFITI 288
           DIH  G ++++ H     A    A         A+ W       ++G+KMSKS GN +  
Sbjct: 248 DIHLVGKEIVWFHSVIWPAMLFSAGIPVPKRIVAHAWW-----TVDGKKMSKSIGNVVNP 302

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPI----DFTVQRLTE--------------- 329
            +++E        + A   R  ++     +P+    DF+   L                 
Sbjct: 303 IDMVE-------KYGADAFRYFLIRE---KPVWDDGDFSESALKNRINGELMSDLSNLVA 352

Query: 330 -----AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
                AE    K       +G ID   + A +++ +  SAI  + +  R+  K
Sbjct: 353 RVLTLAEKFKGKITGNPDLEGFIDEEKVRAAFDNYDPYSAINLIFEGIRKVNK 405



 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 42/117 (35%), Gaps = 11/117 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A    V DV  R  R             +T  D+      + E  ++    
Sbjct: 13  VNDKPHIGHAYTTFVADVFARWYRLNGENVFF-----LTGTDEH---GGKIEKSALEKGK 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ--MIYLIQNIILHGHAYEAN 149
               +  +N+ ++ +   +L         R T++  +  +   +Q +  +G  Y+  
Sbjct: 65  TPKELVDENSDKYRQVWEKLNISY-NRFIRTTDYSHEKAVKLFLQKVWDNGDIYKGE 120


>gi|288819194|ref|YP_003433542.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288788594|dbj|BAI70341.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308752776|gb|ADO46259.1| arginyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 551

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/350 (14%), Positives = 92/350 (26%), Gaps = 106/350 (30%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V DVL  LL  Y       Y  N       ++  +         
Sbjct: 121 PT--GPLHLGHGRGAVVGDVLANLLETYGYRVVREYYINDAGYQVYLLGLSVFCRYMELF 178

Query: 93  NDAISIITSKNTQQ----------------F----------------------------- 107
               + +     ++                F                             
Sbjct: 179 GQEDAELKQVYEREGYKGSYIKKLAEDVKAFYGDALLKEERQKAIERLRDYAVKRLLEEI 238

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYL-IQNIILHGHAYEANNEIIFDTSSIPNYGSFS 166
             D   L           + +    +   I  +   G+ YE +  + F ++   +     
Sbjct: 239 RDDLELLNIKFDVWYSERSLYEEGKVEQVINLLRERGYTYEKDQALWFRSTDFGD----- 293

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFIL-WKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
               D+ ++  R  +  +    +D    W++         + WG                
Sbjct: 294 ----DKDRVLIR-SDGTYTYFASDVAYHWEKYKRGFARVINVWGA--------------- 333

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-------EGRKM 278
                 D           HH            +    N W+H  F+ +       +  +M
Sbjct: 334 ------D-----------HHGYLPRLKGALSALGVPQN-WLHVQFVQMVRLFSAGQEVRM 375

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           SK  G F+T+ EL+E          +  +R   L      P+DF +  L 
Sbjct: 376 SKRTGEFVTLRELVEEVG-------SDAVRFTFLTKRSDTPLDFDIDLLK 418


>gi|332981922|ref|YP_004463363.1| Isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699600|gb|AEE96541.1| Isoleucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 924

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 15/136 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ EGRKMSKS GN +   +++       + + A ++RL +
Sbjct: 573 SVATRGRAPYDEVLTHGMVVDGEGRKMSKSLGNGVDPQDVV-------QEYGADILRLWV 625

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSAL-YNDLNTVS--A 364
               Y+  +  +   L +   +  K   T+     +    +P    A+ Y++L  +   A
Sbjct: 626 TSADYKNDMRISKSILKQLSEVYRKIRNTARFLMGNLYDFNPD-TDAMPYDELKEIDRWA 684

Query: 365 IQALHKLARESTKNHD 380
           +  LH+L +E T+ +D
Sbjct: 685 LMRLHQLIQEVTEAYD 700


>gi|311897996|dbj|BAJ30404.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054]
          Length = 534

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 24/151 (15%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR------QEHP 88
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A       QE  
Sbjct: 22  VNDRPHLGHAYTTVAGDVLTRWHRQRG--EDVWYLTGTDEHGQKILRTAEANGVTPQEWC 79

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
              + +A   +              L   A     R T   H  ++   +Q++   G  Y
Sbjct: 80  DKLVGEAWKPLWEH-----------LRI-ANDDFIRTTEARHTDRVQEFVQDLYDKGEIY 127

Query: 147 EAN--NEIIFDTSSIPNYGSFSRRKIDEQKM 175
           + +               G       +++K+
Sbjct: 128 QGSYTGPYCVGCEEYKLPGELLPGTTEDEKL 158



 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 52/176 (29%), Gaps = 41/176 (23%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D++  H     A    A          + NG+L + G KMSKSN   I   +L 
Sbjct: 268 VHLVGKDILRFHAVIWPAMLMAA--GLPLPRRVVANGWLMVGGEKMSKSNLTGIAPTDLT 325

Query: 293 ETKKFGGRSWPAPVIRLAML----------------MTHYREPIDFTVQRLTE-AEILLS 335
                    +     R   L                   Y   +      L      ++ 
Sbjct: 326 S-------HFGVDAYRYYFLRAIPFGTDGSFSWEDFTARYTSELANDFGNLASRVAAMVG 378

Query: 336 KWPQ----TSTSKGIIDPAVLSAL-----------YNDLNTVSAIQALHKLAREST 376
           K+       +T+ G  + A+  AL             +L+    I A+ +  +   
Sbjct: 379 KYFDGALPAATAHGPAEQALADALVKATAEADRKIGEELDFAGGIAAVFEFVKLVN 434


>gi|290968885|ref|ZP_06560422.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781181|gb|EFD93772.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 826

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 52/139 (37%), Gaps = 18/139 (12%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGR 276
           +  +LG   D + GG++    H                    E    + +  G + ++G 
Sbjct: 524 AKKWLG--VDQYIGGIEHAILHLMYSRFCMKVFHDAGLVAVKEPFERL-LTQGMVLMDGS 580

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS GN ++  +++         + A   RL +L        ++++ Q +  +   L 
Sbjct: 581 KMSKSKGNVVSPEDIIA-------KYGADTGRLFILFAAPPERDLEWSEQGVEGSYRFLH 633

Query: 336 K-WPQTSTSKGIIDPAVLS 353
           + W        ++D A  +
Sbjct: 634 RVWRIVEQYMDMLDTAETA 652


>gi|317484769|ref|ZP_07943668.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923976|gb|EFV45163.1| leucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 836

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 52/166 (31%), Gaps = 42/166 (25%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  AN+ +  G +  +G KMSKS GN +   E++         + A  +RL  L      
Sbjct: 571 EPFANL-LTQGMVLKDGSKMSKSKGNTVDPTEMIA-------KYGADTVRLFCLFAAPPE 622

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------------DPAVLSAL-- 355
              D++   +  A   L++  +       +                    +  +   L  
Sbjct: 623 RDFDWSDTGIEGASRFLNRIWRLYADTCEVLSPVGACSSTAADATTAAAKEVRLKEHLTV 682

Query: 356 ---YND------LNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
                D       NT  AI A+ +L        D L        IL
Sbjct: 683 KKAGEDIGNRYQFNT--AIAAIMELVNALYLAKDELATTEEGRKIL 726


>gi|291460834|ref|ZP_06600215.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291380424|gb|EFE87942.1| isoleucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 398

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +       ++  H GF+N  EGRKMSKS GN +  ++++       + + A ++RL 
Sbjct: 46  SVSSTGDSPYKSVLTH-GFVNDGEGRKMSKSLGNTVAPSDVI-------KVYGADILRLW 97

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YR+ +  +   + +      +   T+ 
Sbjct: 98  CGSVDYRDDVRISDNIIKQMSEAYRRIRNTAR 129


>gi|14590812|ref|NP_142884.1| leucyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6919978|sp|O58698|SYL_PYRHO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|75765429|pdb|1WZ2|A Chain A, The Crystal Structure Of Leucyl-Trna Synthetase And
           Trna(Leucine) Complex
 gi|75765430|pdb|1WZ2|B Chain B, The Crystal Structure Of Leucyl-Trna Synthetase And
           Trna(Leucine) Complex
 gi|3257379|dbj|BAA30062.1| 967aa long hypothetical leucyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 967

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 59/165 (35%), Gaps = 17/165 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D    G DLI  H    I       R E        NGF  LEG+KMSKS GN +   
Sbjct: 603 PLDWRCSGKDLIPNHLTFFIFNHVAIFREEHWPKGIAVNGFGTLEGQKMSKSKGNVLNFI 662

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++    +    D+  + + +    + ++ +  +     +
Sbjct: 663 DAIEENG-------ADVVRLYIMSLAEHDSDFDWRRKEVGKLRKQIERFYELISQFAEYE 715

Query: 349 PAVLSALYNDLNTVSAIQA--LHKLARESTKNHDLLPIFNASAHI 391
                 L +       I    LH+L +   +  + L  F     +
Sbjct: 716 VKGNVELKD-------IDRWMLHRLNKAIKETTNALEEFRTRTAV 753



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P +    H+G+AR   + DV+ R  R            +IT
Sbjct: 43 PYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHIT 83


>gi|302341677|ref|YP_003806206.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638290|gb|ADK83612.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 656

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 40/125 (32%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV DV  R   +    +         +  DKI E A +         
Sbjct: 14  VNAEPHLGHAYTTIVADVARRF--HLLLGQTARMQTGTDEHGDKIAEAAAKNGL------ 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      + +  F      L         R T+  HI  +  L+Q +   G  Y A    
Sbjct: 66  SPRQYADRVSGLFRDLWPHLHIQY-DRFVRTTDPQHIQTVRALLQKVHDQGDIYFAKYGG 124

Query: 153 IFDTS 157
            +  +
Sbjct: 125 NYCVA 129


>gi|221113128|ref|XP_002159170.1| PREDICTED: similar to leucyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 482

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N +A    AD+ EK       NG L L   KMSKS GNF
Sbjct: 88  PLDLRVSGKDLIPNHLTYFLYNHVAVW--ADQQEKWPKSVRANGHLLLNSEKMSKSTGNF 145

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQTST 342
           +T+   +       + + A  +RLA+      + I   +F  +    A + L  + + + 
Sbjct: 146 LTLEHAI-------KKFSADGMRLALADAG--DSIEDANFVEKTADAAILRLFTFVEWTK 196

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                   + S  +N+ N       ++    ++ K ++ L +F  +  + G    +   +
Sbjct: 197 EMIENQENLRSGPFNNFNDKVFHNEIYMAINKAEKAYEKL-LFREALKV-GFFELQVSRD 254

Query: 403 KNISIAIEKLVQE 415
           K   ++++K+ +E
Sbjct: 255 KYREVSLDKMHKE 267


>gi|220931388|ref|YP_002508296.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782868|sp|B8D274|SYM_HALOH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219992698|gb|ACL69301.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 540

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 13/110 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R     + V YV         I  RA++E       ++  II
Sbjct: 17  HLGHIASLLPGDILARYFRLKG--EKVLYVSGSDCHGTPIALRAKRE------GESPRII 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAY 146
             +  Q+F K  T+L      +  + T+   H   +  +I+ +   G+ Y
Sbjct: 69  AERYHQEFKKTFTKLGFSY-DNYTK-TDNPFHHQVVQSIIKKLFEKGYIY 116



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/140 (12%), Positives = 50/140 (35%), Gaps = 34/140 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR 326
           + +L +EG+K+S S    + + ++L       +++    IR  ++     ++  +F+ + 
Sbjct: 317 SEYLTIEGKKLSTSRNWAVWLPDML-------KNYQPDSIRYFLIINGPEKKDSNFSWEE 369

Query: 327 ----------------LTEAEILLSKWPQTSTSKGIIDPAVLSALY----------NDLN 360
                           +    + + K+       G ++  +   +              N
Sbjct: 370 FIHSHNGELLGAYGNFVNRTLVFIEKYYNGLIPDGKLNEKIKEKIETLYHRVGNKIEKTN 429

Query: 361 TVSAIQALHKLARESTKNHD 380
             +A++ +    RE+ K  D
Sbjct: 430 LKNALEVIFNFVREANKYFD 449


>gi|290512629|ref|ZP_06551995.1| isoleucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
 gi|289774970|gb|EFD82972.1| isoleucyl-tRNA synthetase [Klebsiella sp. 1_1_55]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|254490969|ref|ZP_05104151.1| isoleucyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224463878|gb|EEF80145.1| isoleucyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 933

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C      YL +  D++  G D      ++ +  S           +  H   ++ +G+KM
Sbjct: 540 CVLARRDYLNRPADLYLEGSDQHRGWFQSSLLTSVATTDSAPYKAVLTHGFTVDAQGKKM 599

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++       ++  A +IRL +  T Y   +  + + L        +  
Sbjct: 600 SKSKGNVVAPQKVI-------KNLGADIIRLWVAATDYSGEMHVSDEILKRTADSYRRIR 652

Query: 339 QTST 342
            T+ 
Sbjct: 653 NTAR 656


>gi|206579966|ref|YP_002240526.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae 342]
 gi|254782412|sp|B5Y235|SYI_KLEP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|206569024|gb|ACI10800.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae 342]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|145236713|ref|XP_001391004.1| leucyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
 gi|134075465|emb|CAK48026.1| unnamed protein product [Aspergillus niger]
          Length = 1126

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 716 PLDVRVSGKDLIQNHLTFFLYIHVALFPPEYWPRGVRANGHLLLNGEKMSKSTGNFLTLK 775

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 776 DAVD-------KFGADATRIAF 790


>gi|146303356|ref|YP_001190672.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|189082974|sp|A4YE96|SYL1_METS5 RecName: Full=Leucyl-tRNA synthetase 1; AltName: Full=Leucine--tRNA
           ligase 1; Short=LeuRS 1
 gi|145701606|gb|ABP94748.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/151 (13%), Positives = 35/151 (23%), Gaps = 26/151 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT----------------DID 76
           P      HIG+ R  I  D++ R  R         +    T                DI 
Sbjct: 40  PYTNSPLHIGHGRTYITADIVARYQRMIGKNVLFPFAFQFTGTPILSISESIKRGDSDII 99

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP------THQPRATNHIP 130
              I   +     +   +    +     +   +    L           T  PR    I 
Sbjct: 100 SDFINLYKISPEKVREFEDPLKLAEYFKEDMKRMAKALGLSVDWRREFTTIDPRFGQFIK 159

Query: 131 QMIYLIQNIILHGHAYEANNEI-IFDTSSIP 160
                   +   G    A + +      + P
Sbjct: 160 WQFR---KLKEKGFITTATDAVGYCPNDNFP 187


>gi|324326564|gb|ADY21824.1| lysyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 517

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 76/458 (16%), Positives = 132/458 (28%), Gaps = 94/458 (20%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDA-ISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
             R +  ++D   ++     +  IP      +       ++F +                
Sbjct: 69  RFRKVPKNVDSSFVKYIGMPYCDIPDPYGRHNSYAEHFEKEFEESLQVFGIE-------- 120

Query: 126 TNHIPQMIYLIQNIILHGH--AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
              I Q               A+    EI          G  S  + +     T   E+ 
Sbjct: 121 VEFIYQHAEYRSGRYNKNILEAFYKRKEIYDILMKFKT-GECSEEERNNFYPTTLYCERC 179

Query: 184 HKKN----PADFILWKRSTPME----------------PGWESPWGRGRPGWHIECSAMS 223
            K        D +L K     E                  W+  W      W IE     
Sbjct: 180 GKDTTTITHFDEVLKKVRYECECRNQNELSILNTNNMKLNWKVDWPMR---WMIEDVVFE 236

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKS 281
                       GG D         +++          A  ++   F+ ++G   KMS S
Sbjct: 237 P-----------GGRDHSSETGSYNVSKEIARKIFNHEAPHYVAYDFIGIKGNHEKMSSS 285

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWP 338
           +GN IT +ELL       + +   VI        YR    F     + +        +  
Sbjct: 286 SGNSITPSELL-------KVYLPEVILFMF--AKYRPDAAFHIGLDEDVIRNYTEYERLK 336

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
            +  +K + +  +  A+              KL+R  +   +  P FN  A  L +    
Sbjct: 337 DSYENKTLKNEDLFDAI--------------KLSRVDSGFKE-YPKFNQVAGTLPLLNFD 381

Query: 399 EHLNKNISIAIE---KLVQERLILLKMKKFSSADYIRK 433
             + + I   I+    L + R I  + + +     IR 
Sbjct: 382 SFILQEILEKIDRSYALDEMRAISNRAEHW-----IRN 414


>gi|320588787|gb|EFX01255.1| leucyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 1106

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 25/142 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D    G DLI  H    +         +        NG L + G+KMSKS GNF+T+ 
Sbjct: 692 PLDARISGKDLINNHLTFCMYHHAALFPKKYWPRGIRVNGHLLVNGQKMSKSTGNFLTLR 751

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEIL----LSKWPQTST 342
           E           + A   R+A+      + I   +F  + +  A IL    L KW Q + 
Sbjct: 752 E-------STEKFGADATRIALADAG--DGIEDANF-EETVANATILRLYELRKWAQETL 801

Query: 343 S--------KGIIDPAVLSALY 356
           +         G+ D    + L 
Sbjct: 802 AGESLRKGELGLFDKMFENELN 823


>gi|313895895|ref|ZP_07829449.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312975320|gb|EFR40781.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 843

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 68/169 (40%), Gaps = 18/169 (10%)

Query: 230 VFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H          +  +   D  E   N+ +  G +  +G KMSKS G
Sbjct: 550 PVDQYIGGIEHAILHLLYARFFTKVLRDTEMLDFDEPFTNL-LTQGMVIKDGAKMSKSLG 608

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++  E+++        + A   RL +L        +D++ Q +  A   LS+ W    
Sbjct: 609 NVVSPEEIIDR-------YGADTARLFILFAAPVERDLDWSDQGVEGAFRFLSRVWRILG 661

Query: 342 TSKGIIDPAVLSALYNDLNT--VSAIQALHKLARESTKNHDLLPIFNAS 388
             +  I  A  +   + L+T      + LH   ++ T++     +FN +
Sbjct: 662 QFEETIRSASDAYDTDTLSTEETELRRVLHSTVKKVTEDVRDRFMFNTA 710


>gi|262044935|ref|ZP_06017977.1| isoleucine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037662|gb|EEW38891.1| isoleucine-tRNA ligase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 950

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 588 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 640

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 641 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 694

Query: 367 ALHKLA 372
            L + A
Sbjct: 695 VLDRWA 700


>gi|254390367|ref|ZP_05005584.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294813846|ref|ZP_06772489.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
 gi|326442264|ref|ZP_08216998.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|197704071|gb|EDY49883.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
 gi|294326445|gb|EFG08088.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
           27064]
          Length = 537

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 42/135 (31%), Gaps = 12/135 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     +    +
Sbjct: 22  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAETHGVTPQ--E 77

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
               + S+  +   +              R T   H  ++   +Q++   G  Y+     
Sbjct: 78  WCDKLVSEAWKPLWEHLDIAN----DDFIRTTEKRHTDRVKEFVQDLYDKGEIYKGGYEG 133

Query: 151 EIIFDTSSIPNYGSF 165
                       G  
Sbjct: 134 PYCVGCEEYKLPGDL 148


>gi|24375036|ref|NP_719079.1| isoleucyl-tRNA synthetase [Shewanella oneidensis MR-1]
 gi|81459913|sp|Q8EBI4|SYI_SHEON RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24349779|gb|AAN56523.1|AE015789_10 isoleucyl-tRNA synthetase [Shewanella oneidensis MR-1]
          Length = 940

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I   ++            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQQVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DP       NDL  V  + AL + A  R +    +++  +  
Sbjct: 666 LANLNGFDPK------NDLVAVEDMVALDRWAVRRAAALQQEIIEAYEQ 708


>gi|88596555|ref|ZP_01099792.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|88191396|gb|EAQ95368.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
          Length = 530

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 75/403 (18%), Positives = 130/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAILNDAFEARALQKIPDYLKNLAANFH 485


>gi|288937224|ref|YP_003441283.1| isoleucyl-tRNA synthetase [Klebsiella variicola At-22]
 gi|288891933|gb|ADC60251.1| isoleucyl-tRNA synthetase [Klebsiella variicola At-22]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|239831997|ref|ZP_04680326.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239824264|gb|EEQ95832.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 525

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     K V ++    +   K+++ AR+E            
Sbjct: 31  PHIGHAYELIATDAMARFQRL--NGKDVFFLTGTDEHGIKMLQSARKE------GITPRE 82

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + + +  +G  Y+      +  
Sbjct: 83  LADRNTAAFRQMADVLNSSNDD-YIRTSEERHYKASQAIWKAMADNGDIYKGGYAGWYSV 141

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 142 RDEAYYGE 149


>gi|330009358|ref|ZP_08306515.1| isoleucine--tRNA ligase [Klebsiella sp. MS 92-3]
 gi|328534821|gb|EGF61367.1| isoleucine--tRNA ligase [Klebsiella sp. MS 92-3]
          Length = 950

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 588 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 640

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 641 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 694

Query: 367 ALHKLA 372
            L + A
Sbjct: 695 VLDRWA 700


>gi|182437585|ref|YP_001825304.1| methionyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
           13350]
 gi|178466101|dbj|BAG20621.1| putative methionyl-tRNA synthetase [Streptomyces griseus subsp.
           griseus NBRC 13350]
          Length = 537

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 42/141 (29%), Gaps = 24/141 (17%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN- 93
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A   + +     
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANNVTPQAWC 80

Query: 94  -----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
                +A   +              L   A     R T   H  ++   +Q++   G  Y
Sbjct: 81  DKLVEEAWKPLWEH-----------LNI-ANDDFIRTTEKRHTDRVQEFVQDLYDKGEIY 128

Query: 147 EA--NNEIIFDTSSIPNYGSF 165
           +                 G  
Sbjct: 129 KGGYEGPYCVGCEEYKLPGDL 149


>gi|167725508|ref|ZP_02408744.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 1021

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C AD       I  H   ++  GRKMSKS GN ++   + +T+        A ++RL + 
Sbjct: 612 CAADGRAPFRAILTHGFVVDGAGRKMSKSLGNTVSPQRIADTRG-------ADILRLWIA 664

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 665 STDYAAEMSISDEILERVVETYRRMRNT 692


>gi|33519593|ref|NP_878425.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
 gi|81666677|sp|Q7VQL0|SYI_BLOFL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33517256|emb|CAD83639.1| isoleucyl-tRNA synthetase [Candidatus Blochmannia floridanus]
          Length = 953

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 19/148 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D++  G+D       + +  +           +  H   ++ +G KMSKS GN I   
Sbjct: 567 QIDLYLEGVDQYRGWFMSSLIIAVAIKGYAPYKQVLSHGFTIDDKGNKMSKSLGNIIRPL 626

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           +++         + + ++RL +  + Y + +  +   L     +  +   T         
Sbjct: 627 DIVN-------KFGSDILRLWVASSDYSKDMVISDDVLKNVTDIYRRIRNTIR------- 672

Query: 350 AVLSALYN-----DLNTVSAIQALHKLA 372
             L+ + +     DL   + + AL + A
Sbjct: 673 FFLANINDFDPEKDLVQSNRMVALDQWA 700


>gi|312213488|emb|CBX93570.1| similar to leucyl-tRNA synthetase [Leptosphaeria maculans]
          Length = 1163

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 52/225 (23%), Positives = 77/225 (34%), Gaps = 40/225 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+TI 
Sbjct: 724 PLDMRCSGKDLIQNHLTFHLYGHAAIFPKENWPRSIRVNGHLLLNGDKMSKSTGNFLTIA 783

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE--AEILLSKWPQTSTSKGII 347
              E        + A   R+A+         + T     E  A   + K  +       +
Sbjct: 784 GATE-------KFGADATRMALADA----GDEITDANFEETVANANILKLFELRKWCEDL 832

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              V  A+Y      +A     K + E  KN D++   + S   L         +     
Sbjct: 833 ---VKEAIY----VPNAASYAEKRSAERIKNPDVIQRQSGSERFL--------FDDMFDN 877

Query: 408 AIEKLVQER---------LILLKMK--KFSSA-DYIRKQLESKGF 440
            +  LV+E           + LK     F+SA D+ R+  ++ G 
Sbjct: 878 EMNLLVEETYQHYQVTSYKLALKSGFYDFTSARDFYREATKAAGV 922


>gi|118595199|ref|ZP_01552546.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440977|gb|EAV47604.1| Leucyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 810

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 64/164 (39%), Gaps = 37/164 (22%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
           +  E    + +  G +  +G KMSKS GN +   +L++        + A   RL ++   
Sbjct: 552 NTKEPFKKL-LTQGMVLKDGAKMSKSKGNTVDPQDLID-------KYGADTARLFIMFAA 603

Query: 315 HYREPIDFTVQRLTEAEILLSKW----------PQTSTSKGIID---------PAVLSAL 355
              + ++++ + +  +   L +            +   +  +I+          A +  +
Sbjct: 604 PAEQSLEWSDEGIEGSHRFLKRLWKLVYEFIDHKEEQETSNVIEINQELKYKLNATIEKV 663

Query: 356 YND------LNTV-SAIQALHKLARESTKNHDLLPIFNASAHIL 392
            +D       NT  S+I  L  +  ++T+N+ + P+      +L
Sbjct: 664 TDDLERRTSFNTAISSIMELMNMLTKTTQNNTVGPLLRK--EVL 705


>gi|220932295|ref|YP_002509203.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219993605|gb|ACL70208.1| valyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 882

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 30/204 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I  +          +++IH    +  GRKMSKS GN I   E+
Sbjct: 480 DVLVTGRDIIFFWVARMIFMALEFMDEPPFKDVYIHGLIRDALGRKMSKSLGNGIDPLEV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST----SK 344
           +E        + A  +R  ++  +   P   + F  +RL  +    +K    +     + 
Sbjct: 540 VE-------KYGADALRFMLITGN--TPGNDMRFREERLEASRNFANKIWNAARFILMNT 590

Query: 345 GIIDPAVLSALYNDLNTVSA----IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
             +DP+ +    NDL    A    +  L K+  E  K  +    F  +A +L        
Sbjct: 591 DDLDPSEID--ENDLKLTLADKWMLSRLQKVIEEVDKAFEKY-YFGEAAKVL----YDFI 643

Query: 401 LNKNISIAIEKLVQERLILLKMKK 424
            ++     IE L++ RL   + K 
Sbjct: 644 WSEFCDWYIE-LIKPRLY--QDKD 664


>gi|89093564|ref|ZP_01166512.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89082254|gb|EAR61478.1| isoleucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     +  H   ++ +GRKMSKS GN +   E++         + A ++RL +  
Sbjct: 581 AIKGCAPYKQVLTHGFTVDGQGRKMSKSVGNVVAPQEVMN-------KYGADILRLWVAS 633

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  +   L  A     +   T+ 
Sbjct: 634 TDYSGEMTCSDDILKRAADAYRRIRNTAR 662


>gi|82539458|ref|XP_724116.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23478651|gb|EAA15681.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii]
          Length = 882

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 63/327 (19%), Positives = 107/327 (32%), Gaps = 71/327 (21%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A  +I+ D + R  R    +   T     T  D+  ++ A Q   ++  N 
Sbjct: 229 VNGEPHIGHAYEIILADAIARYHRNLGRDIFFT-----TGADEHGLKIANQ---ALRNNM 280

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ--NIILHGHAYEANNEI 152
               +   N  +F K    L      +  R T  I + I        + +G  Y    E 
Sbjct: 281 TPQELCDLNVIKFKKLNKDLHTTE-DYYVRTTADIHKKIAQSIWMKCVENGDIYLGEYEG 339

Query: 153 IFDTS----------SIPNY-GSFSRRKIDEQKMGT--------RVPEKYHKKNPADF-- 191
            ++             + NY    +  K+++ K  +        +     +  +  DF  
Sbjct: 340 WYNVREETYIPENEAKLMNYIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQYIHDNPDFIQ 399

Query: 192 -------ILWKRSTPMEP----GWESPWGRGRPG--------W-------HIECSAMSS- 224
                  IL +   P+E       +  WG   P         W       +  C   +  
Sbjct: 400 PEKNRNEILQRLKEPLEDLSCSRTKFTWGIPVPNDPKHVMYVWMDALINYYSSCFINNQE 459

Query: 225 --HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y     DIH  G D+++ H          A+       ++ H   L  +G+KMSKS 
Sbjct: 460 KVKYWPA--DIHIIGKDIVWFHAVIFPTILMSANIELPKC-VFSHGFVLAGDGKKMSKSL 516

Query: 283 GNFITINELLETKKFGGRSWPAPVIRL 309
            N I   E++E       S+ +   R 
Sbjct: 517 KNVIDPKEIIE-------SYGSDAFRF 536


>gi|326403063|ref|YP_004283144.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325049924|dbj|BAJ80262.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 511

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 12/111 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   +  DVL R  R    +        +T  D+      + E  +   N 
Sbjct: 14  VNGAPHIGHAYTSVAADVLARFKRLDGFDVHF-----LTGTDEH---GQKVEATARANNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIIL 141
           A    T +   +F      +           +PR       +   I+    
Sbjct: 66  APQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGA 116


>gi|311280993|ref|YP_003943224.1| isoleucyl-tRNA synthetase [Enterobacter cloacae SCF1]
 gi|308750188|gb|ADO49940.1| isoleucyl-tRNA synthetase [Enterobacter cloacae SCF1]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 660


>gi|297529000|ref|YP_003670275.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252252|gb|ADI25698.1| leucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 805

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 13/137 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 557 KEPFQKLFNQGMILGENNEKMSKSKGNVVNPDDIIESHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++ + L  A   L + W    T  G ++P ++    ND  T+  I   H+  ++ 
Sbjct: 610 EASIAWSTKGLDGARRFLDRVWRLFVTENGELNPNIVDEPAND--TLERIY--HQTVKKV 665

Query: 376 TKNHDLLPIFNASAHIL 392
           T++++ L    A + ++
Sbjct: 666 TEDYEALRFNTAISQLM 682


>gi|238893007|ref|YP_002917741.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238545323|dbj|BAH61674.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|238774010|dbj|BAH66507.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
 gi|238774031|dbj|BAH66527.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 682

Query: 367 ALHKLA 372
            L + A
Sbjct: 683 VLDRWA 688


>gi|162147584|ref|YP_001602045.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209542217|ref|YP_002274446.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786161|emb|CAP55743.1| Methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209529894|gb|ACI49831.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
          Length = 512

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 11/114 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   +  D++ R  R    +        +T  D+      + E  +     
Sbjct: 14  VNGAPHIGHAYTSVAADIVARFKRLAGFDVFF-----LTGTDEH---GQKVEQAAQAAGL 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
           A      + +  F      +         R T   HI     L + I  +GH Y
Sbjct: 66  APIAFADRVSADFRAMYDVMNVSYDDF-IRTTEPRHIAGATALWERIAANGHIY 118



 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 31/79 (39%), Gaps = 9/79 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++  H     A    A        ++ H G+  +EG KMSKS GN +   +L+ 
Sbjct: 258 HLVGKDIVRFHAIYWPALLMAAGLDLPDC-VFSH-GWWTIEGEKMSKSLGNVVDPRDLVA 315

Query: 294 TKKFGGRSWPAPVIRLAML 312
                        +R  ++
Sbjct: 316 EFGLDP-------VRFFLM 327


>gi|148259982|ref|YP_001234109.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|146401663|gb|ABQ30190.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 511

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 12/111 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   +  DVL R  R    +        +T  D+      + E  +   N 
Sbjct: 14  VNGAPHIGHAYTSVAADVLARFKRLDGFDVHF-----LTGTDEH---GQKVEATARANNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIIL 141
           A    T +   +F      +           +PR       +   I+    
Sbjct: 66  APQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGA 116


>gi|85707107|ref|ZP_01038195.1| isoleucyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85668393|gb|EAQ23266.1| isoleucyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 994

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/179 (14%), Positives = 57/179 (31%), Gaps = 16/179 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QSC          +  H   L+ +G KMSKS GN +   E++       + + A ++RL 
Sbjct: 648 QSCGTRGRAPYRGVLTHGFTLDEKGNKMSKSLGNTVAPEEVV-------KQYGADILRLW 700

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLNTVSA----- 364
           +    Y   +    + L        +   T     G + P   +   +  +         
Sbjct: 701 VAQADYTADLRIGPEILKGVADGYRRLRNTLRFMLGALAPFSEADRVDPADMPELERWVL 760

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLILL 420
             +  L    ++  + +D   +F    +   +++   + +        +     R    
Sbjct: 761 HRLAELDHKVKKGYETYDFQGVFQQIFNFCTLDLSAFYFDIRKDALYCDGDTARRRAAR 819


>gi|315926518|gb|EFV05900.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 196

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 122 HYCISCESF 130


>gi|304313869|ref|YP_003849016.1| leucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587328|gb|ADL57703.1| leucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 43/126 (34%), Gaps = 10/126 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I          +     +  G   LEG KMS S GN I + 
Sbjct: 562 PLDWRLSAKDLIGNHLTFHIFHHSAIFPESRWPRGVVVFGMGLLEGNKMSSSKGNVILLR 621

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +E          A V+RL ++ +   + +  D+  + +      +  + +       I
Sbjct: 622 DAIERHG-------ADVVRLFLMSSAEPW-QDFDWREKEVIGTRRRIEWFREFGERVSEI 673

Query: 348 DPAVLS 353
               L+
Sbjct: 674 WDGELA 679


>gi|170725652|ref|YP_001759678.1| isoleucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
 gi|254782435|sp|B1KIT5|SYI_SHEWM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169810999|gb|ACA85583.1| isoleucyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
          Length = 940

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 59/169 (34%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++  GRKMSKS GN
Sbjct: 553 EFQGHDIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGNGRKMSKSVGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I    +            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILKRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    +P        DL  V  + AL + A  R +    +LL  +  
Sbjct: 666 LANINGFNPET------DLVAVEEMVALDRWAVRRAAALQEELLEAYEQ 708


>gi|90412466|ref|ZP_01220469.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90326503|gb|EAS42909.1| isoleucyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 948

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 60/171 (35%), Gaps = 21/171 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 560 EEYNGNSADLYLEGSDQHRGWFQSSLISSVAMKGKAPYNQVLTHGFVVDGQGRKMSKSVG 619

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+  
Sbjct: 620 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR- 671

Query: 344 KGIIDPAVLSALY-----NDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
                   L+ L       DL     + AL + A  R      +++  ++ 
Sbjct: 672 ------FFLANLNGFNPETDLVAPEDMVALDRWAVGRAMEAQEEIIKAYDE 716


>gi|85058392|ref|YP_454094.1| isoleucyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123766475|sp|Q2NVY6|SYI_SODGM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84778912|dbj|BAE73689.1| isoleucyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  ++++          A ++RL 
Sbjct: 576 ISTAMHGKAPYRQVLTHGFTVDGQGRKMSKSVGNVVSPQQVMDKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   +  + + L  +     +   T+     +    DPA
Sbjct: 629 VASTDYTGEMAVSDEILKRSADAYRRIRNTARFLLANLNGFDPA 672


>gi|170768583|ref|ZP_02903036.1| isoleucyl-tRNA synthetase [Escherichia albertii TW07627]
 gi|170122687|gb|EDS91618.1| isoleucyl-tRNA synthetase [Escherichia albertii TW07627]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEDMV 682

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 683 VLDRWAVGCAKAAQEDILKAYEA 705


>gi|57238047|ref|YP_179296.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81353486|sp|Q5HTT9|SYR_CAMJR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57166851|gb|AAW35630.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058607|gb|ADT72936.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 530

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 131/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 92  --INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
             +++ +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 SILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSQENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI +++++           +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVNEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFH 485


>gi|300821972|ref|ZP_07102116.1| isoleucine--tRNA ligase [Escherichia coli MS 119-7]
 gi|300525572|gb|EFK46641.1| isoleucine--tRNA ligase [Escherichia coli MS 119-7]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 660


>gi|292489405|ref|YP_003532292.1| Isoleucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898376|ref|YP_003537745.1| isoleucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198224|emb|CBJ45330.1| isoleucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291554839|emb|CBA22710.1| Isoleucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYSGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|212638460|ref|YP_002314980.1| valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|254783550|sp|B7GH39|SYV_ANOFW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|212559940|gb|ACJ32995.1| Valyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 875

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 16/160 (10%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W++   +   W S   W     GW  + SA  + Y     D+   G D+IF   
Sbjct: 431 PADIENWEQDQDVLDTWFSSALWPFSTMGWPDKTSADYNRY--YPTDVLVTGYDIIFFWV 488

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I Q+          ++ IH    + +GRKMSKS GN +   ++++        + A 
Sbjct: 489 SRMIFQALEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDVID-------QYGAD 541

Query: 306 VIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
            +R  +       P   + F+ +++      ++K    S 
Sbjct: 542 SLRYFLATGS--SPGQDLRFSTEKVEATWNFVNKIWNASR 579


>gi|146310248|ref|YP_001175322.1| isoleucyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145317124|gb|ABP59271.1| Isoleucyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 948

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 586 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 638

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 639 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 670


>gi|312173570|emb|CBX81824.1| Isoleucyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYSGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|302915601|ref|XP_003051611.1| hypothetical protein NECHADRAFT_68206 [Nectria haematococca mpVI
           77-13-4]
 gi|256732550|gb|EEU45898.1| hypothetical protein NECHADRAFT_68206 [Nectria haematococca mpVI
           77-13-4]
          Length = 1121

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/82 (30%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 708 PLDVRVSGKDLIPNHLTFFLYVHLAIFPPEYWPRGVRANGHLMLNGEKMSKSTGNFMTLR 767

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +L          + A   R+A+
Sbjct: 768 DL-------TLKYGADASRIAL 782


>gi|210623773|ref|ZP_03294033.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
 gi|210153355|gb|EEA84361.1| hypothetical protein CLOHIR_01984 [Clostridium hiranonis DSM 13275]
          Length = 807

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 59/184 (32%), Gaps = 40/184 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                    E   N+ +  G +  EG KMSKS G
Sbjct: 514 PVDQYIGGVEHAIMHLLYARWLMKAFHSMGMVEADEPFKNL-LTQGMVLKEGSKMSKSKG 572

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  ++++        + A   RL +L        +D++ Q +      L++  +   
Sbjct: 573 NTVSPLKIID-------EYGADTARLFILFAAPPERDLDWSDQGVEGCFKFLNRVYRLVD 625

Query: 343 SKGI-------------------------IDPAVLSALYNDLNTVSAIQALHKLARESTK 377
                                        +   V S L       ++I +L +L  E  K
Sbjct: 626 ELAEEVKNCDDEFGKLTSADKDMRFTINSVIKKVTSDLDEKFGFNTSIASLMELINEMYK 685

Query: 378 NHDL 381
             +L
Sbjct: 686 YKEL 689


>gi|50306721|ref|XP_453334.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49642468|emb|CAH00430.1| KLLA0D06105p [Kluyveromyces lactis]
          Length = 1095

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 31/146 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T++
Sbjct: 686 PLDVSISGKDLIPNHLTFFIYTHVALFPRKFWPKGIRVNGHLMLNNAKMSKSTGNFMTLH 745

Query: 290 EL-------------------LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ++                   +E       +  A ++RL  L        ++  + + + 
Sbjct: 746 DMVTKFGADASRIALADAGDTVEDANLDESNANAAILRLYNLK-------EWAEEMVKDI 798

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALY 356
             L     +T +  G  D A  + + 
Sbjct: 799 GNL-----RTDSEYGFFDIAFENEMN 819


>gi|283835086|ref|ZP_06354827.1| isoleucine--tRNA ligase [Citrobacter youngae ATCC 29220]
 gi|291069380|gb|EFE07489.1| isoleucine--tRNA ligase [Citrobacter youngae ATCC 29220]
          Length = 938

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 660


>gi|51244638|ref|YP_064522.1| methionyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|50875675|emb|CAG35515.1| probable methionyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 645

 Score = 48.7 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/333 (18%), Positives = 101/333 (30%), Gaps = 77/333 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D   R  R+  GE  V +     +  +KI+E A +        +
Sbjct: 12  VNAQPHLGHAYTTIVADTYSRF-RHLCGED-VRFQTGTDEHGEKIVEAAEKN------GE 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY-EANNE 151
           A      + +  F +    L    P +  R T+  HI  +  ++Q +   G  Y +    
Sbjct: 64  APKEYVDRISGMFRQTWPILGIE-PDNYIRTTDANHIATVQKVLQQVYDKGDIYFDKYTG 122

Query: 152 IIFD------TSSIPNYGSFSRRKIDEQKMGT----------RVPEKYHKKNPADFILWK 195
           +         T      G     +   Q++            +     H     DFI   
Sbjct: 123 LYCRGCERFLTEKELVDGKCPDHQTAPQEIAEQNYFFKMSKYQQQLLDHINANEDFITPH 182

Query: 196 RSTPMEPGWESP----WGRGRP----GWHIECS------------AMSSHYLGKVFD--- 232
           R       + S         RP     W IE              A+ ++  G  F    
Sbjct: 183 RYRNEMLSFLSEPLEDLCISRPKSRLTWGIELPFDDNFVTYVWFDALINYLTGLGFPEDD 242

Query: 233 ---------IHGGGLDLIFPHH----ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
                     H    D++ PH        +A      +       W      N++  KMS
Sbjct: 243 KYNKFWPVAEHVIAKDILKPHAIFWPTMLMAMELPLYKKLHVHGYW------NVDNTKMS 296

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           KS GN +   EL++        +    +R   L
Sbjct: 297 KSIGNVVRPKELVD-------EYGLDTLRYFTL 322


>gi|310778463|ref|YP_003966796.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747786|gb|ADO82448.1| Isoleucyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 931

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  +        +  H GF+N  EG+KMSKS GN ++ +++++T       + A ++RL 
Sbjct: 577 SIGSTGDAPYKQVLTH-GFVNDGEGKKMSKSTGNVMSPDDVIKT-------YGADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                YRE +  +   L +      +   T+ 
Sbjct: 629 CASVDYREDVKISENILKQMAEAYRRVRNTAR 660


>gi|61657325|emb|CAI44244.1| leucyl-tRNA synthetase [Thermotoga neapolitana]
          Length = 876

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 78/203 (38%), Gaps = 24/203 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 580 PVDQYIGGVEHAILHLLYSRFITKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 638

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++ ++++E        + A  +R+ +L M    +  +++   +      + + W    
Sbjct: 639 NVVSPDDMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFIRRLWNTFY 691

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQA---LHKLARESTKNHDLLPIFNASAHILGIEVCK 398
           T    +    +  L   L T    +    LH + ++ T   D+   F  +  I G+    
Sbjct: 692 TILPHVKEETVEGLS--LTTPVEKELRRKLHSIIKKIT--EDIEGGFKFNTAISGLMELI 747

Query: 399 EHLNKNISIAIEKLVQERLILLK 421
            HLN+ +S   E     R +L +
Sbjct: 748 NHLNQYLSGVPEDQWN-RKLLRE 769


>gi|323970697|gb|EGB65951.1| anticodon-binding domain-containing protein [Escherichia coli
           TA007]
          Length = 431

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 52/143 (36%), Gaps = 19/143 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 69  ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 121

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ 366
           +  T Y   +  + + L  A     +   T+     +    DPA       D+     + 
Sbjct: 122 VASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAK------DMVKPEEMV 175

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A    K    D+L  + A
Sbjct: 176 VLDRWAVGCAKAAQEDILKAYEA 198


>gi|323212891|gb|EFZ97693.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556152]
          Length = 903

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 537 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 589

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 590 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 621


>gi|323128364|gb|ADX15794.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 4/74]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|260887853|ref|ZP_05899116.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|330838721|ref|YP_004413301.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|260862359|gb|EEX76859.1| leucine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|329746485|gb|AEB99841.1| leucyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 824

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 13/108 (12%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++  E++       + + A   RL +L      
Sbjct: 565 EPFQNL-LTQGMVIKDGAKMSKSKGNVVSPEEII-------QKYGADTARLFILFAAPVE 616

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN-DLNTVSA 364
             ++++ Q +  A   L++  +        + A+   + + D +T++A
Sbjct: 617 RDLEWSDQGVEGAFRFLNRVWRIVAH---FEDAIREGIDDYDHSTLTA 661


>gi|213852257|ref|ZP_03381789.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. M223]
          Length = 903

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 537 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 589

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 590 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 621


>gi|168464423|ref|ZP_02698326.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
 gi|195632670|gb|EDX51124.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL317]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|161504824|ref|YP_001571936.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. arizonae
           serovar 62:z4,z23:-- str. RSK2980]
 gi|160866171|gb|ABX22794.1| hypothetical protein SARI_02948 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|309775278|ref|ZP_07670287.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916941|gb|EFP62672.1| arginine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 547

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 57/310 (18%), Positives = 95/310 (30%), Gaps = 44/310 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+AR     D + RL++    + C  Y  N  D  ++I+   +        
Sbjct: 130 PT--GDLHLGHARGAAWGDSITRLMKASGYDVCREYYVN--DAGNQIVNLGKSLQARYRE 185

Query: 93  NDAISIITSKNTQQFV-KDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
           +  +          +  +D   +A         A   +    +         G A+E + 
Sbjct: 186 HLGLDF--DLPEDGYHGEDVKNIAIAIADEYKDAYVEYNDANLKF---FKEKGIAFELDK 240

Query: 151 --------EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
                    + FD  S       S R   + +    V  +       D  LW  +T    
Sbjct: 241 IRRDLDNFRVHFDVWSSEQ----SIRDAGKVEKALDVLHEKGLTYEEDGALWFATTKFGD 296

Query: 203 GWESPWGR--GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI----AQSCCAD 256
             +    +  G   + +   A     L + FD+    +DL+   H   I    A      
Sbjct: 297 DKDRVLRKKDGSYTYLVPDIAYHKDKLDRGFDML---VDLLGADHHGYIPRLKASIEALG 353

Query: 257 RIEKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                  + I    + L   G   KMSK  GN +TI EL E             +R   +
Sbjct: 354 NNPDKLQVDI-IQMVRLVENGEEVKMSKRLGNAVTIRELCEEVGV-------DAVRYFFV 405

Query: 313 MTHYREPIDF 322
                  +DF
Sbjct: 406 QRAVDTHLDF 415


>gi|302830101|ref|XP_002946617.1| hypothetical protein VOLCADRAFT_103034 [Volvox carteri f.
           nagariensis]
 gi|300268363|gb|EFJ52544.1| hypothetical protein VOLCADRAFT_103034 [Volvox carteri f.
           nagariensis]
          Length = 1098

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 46/221 (20%), Positives = 71/221 (32%), Gaps = 66/221 (29%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            FD+   G DLI  H      N  A    A    K       NG L L   KMSKS GNF
Sbjct: 675 PFDLRVSGKDLIQNHLTFALYNHTAVW--ASDPAKWPRAIRCNGHLLLNSEKMSKSTGNF 732

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
            T+ E ++                           +F+   +        +W       G
Sbjct: 733 KTLQEAIQ---------------------------EFSADAM--------RWALADAGDG 757

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----AHILGIEVCKEHL 401
           + D    +      NT +A  A+ +L RE T   + L   +      + +L         
Sbjct: 758 LDDANFET------NTANA--AILRLTRELTWIEECLSPASGLREGPSDVL-------LA 802

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           ++  S AI   +       +   F      R+ L++  + L
Sbjct: 803 DRVFSNAINVAIAATKDAYERMAF------REALKAAAYDL 837


>gi|237729320|ref|ZP_04559801.1| isoleucyl-tRNA synthetase [Citrobacter sp. 30_2]
 gi|226909049|gb|EEH94967.1| isoleucyl-tRNA synthetase [Citrobacter sp. 30_2]
          Length = 938

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 660


>gi|168820987|ref|ZP_02832987.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|205342514|gb|EDZ29278.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. HI_N05-537]
 gi|320089078|emb|CBY98834.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Weltevreden str. 2007-60-3289-1]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|167989899|ref|ZP_02570999.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|168230304|ref|ZP_02655362.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|194442276|ref|YP_002039276.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194470985|ref|ZP_03076969.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197264940|ref|ZP_03165014.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|238910800|ref|ZP_04654637.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Tennessee str. CDC07-0191]
 gi|194400939|gb|ACF61161.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Newport str. SL254]
 gi|194457349|gb|EDX46188.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CVM29188]
 gi|197243195|gb|EDY25815.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA23]
 gi|205331514|gb|EDZ18278.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar 4,[5],12:i:- str. CVM23701]
 gi|205335198|gb|EDZ21962.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Kentucky str. CDC 191]
 gi|312911016|dbj|BAJ34990.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. T000240]
 gi|321222384|gb|EFX47456.1| Isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|283783805|ref|YP_003363670.1| isoleucyl-tRNA synthetase [Citrobacter rodentium ICC168]
 gi|282947259|emb|CBG86804.1| isoleucyl-tRNA synthetase [Citrobacter rodentium ICC168]
          Length = 938

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 660


>gi|283956573|ref|ZP_06374052.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791822|gb|EFC30612.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 530

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 76/404 (18%), Positives = 132/404 (32%), Gaps = 79/404 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
           N     +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKKHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +   +   +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKTIDDVMGADLQS 442

Query: 355 LYND--------LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           L  D        LN  + +    + AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAILSDAFE-ARALQKIPDYLKNLAANFH 485


>gi|238918622|ref|YP_002932136.1| isoleucyl-tRNA synthetase [Edwardsiella ictaluri 93-146]
 gi|259511503|sp|C5B7M4|SYI_EDWI9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|238868190|gb|ACR67901.1| isoleucyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
          Length = 948

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++             ++RL 
Sbjct: 587 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSVGNVVSPQQVMNKLG-------GDILRLW 639

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  +     +   T+ 
Sbjct: 640 VASTDYTSEMAVSDEILKRSADAYRRIRNTAR 671


>gi|213646630|ref|ZP_03376683.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. J185]
 gi|289826107|ref|ZP_06545219.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-3139]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|168262289|ref|ZP_02684262.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
 gi|205348764|gb|EDZ35395.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Hadar str. RI_05P066]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|204927037|ref|ZP_03218239.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
 gi|204323702|gb|EDZ08897.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Javiana str. GA_MM04042433]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|161612367|ref|YP_001586332.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi B str. SPB7]
 gi|161361731|gb|ABX65499.1| hypothetical protein SPAB_00056 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|16763436|ref|NP_459051.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|81524015|sp|Q8ZRZ0|SYI_SALTY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16418541|gb|AAL19010.1| isoleucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|261245280|emb|CBG23065.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267991707|gb|ACY86592.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. 14028S]
 gi|332986998|gb|AEF05981.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. UK-1]
          Length = 944

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 578 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 630

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 631 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 662


>gi|319790327|ref|YP_004151960.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114829|gb|ADU97319.1| leucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 917

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 45/152 (29%), Gaps = 16/152 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  R       V +              A      I        
Sbjct: 45  IHMGHVRNYSIGDVIARFKRLAGFN--VLHPMGWDAFGLPAENAA------IKSGVHPRE 96

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIF 154
            T  N +   ++  RL       +   T   P+     Q     ++  G AY A   + +
Sbjct: 97  WTLSNIENMKEELKRLGFSY-DWEREVTTCSPEYYRWNQWIFLKMLEKGIAYRAKASVNW 155

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             S        +  ++DE+    R      ++
Sbjct: 156 CPSCQT---VLANEQVDEEGRCWRCGTTVEQR 184


>gi|301156678|emb|CBW16148.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
          Length = 944

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 578 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 630

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 631 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 662


>gi|257460821|ref|ZP_05625922.1| isoleucyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257442152|gb|EEV17294.1| isoleucyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 919

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 27/196 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +      +I  H   ++ +G+KMSKS GN +   E+ ++           ++RL +
Sbjct: 585 SCAINECAPYKSILTHGFTVDEKGQKMSKSVGNVVYPQEVAKSHGV-------EILRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN---TVSAIQAL 368
            M+ Y   +  +   L +      K   T           L A  +DLN   T +    L
Sbjct: 638 AMSDYSTDLKISDNILKQVSEQYRKIRNTIR--------FLLASTSDLNEIETSN-FTRL 688

Query: 369 HKLA--RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
            +    R +         F       G       L+ ++S     + ++RL         
Sbjct: 689 DRWILTRAANAFSSAEAAFRNYDFSKGFNALLNFLSADLSGIYLDICKDRLYC------D 742

Query: 427 SADYIRKQLESKGFIL 442
            +D  R++       L
Sbjct: 743 ESDEPRRRSAQSAIAL 758


>gi|168234789|ref|ZP_02659847.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|194734368|ref|YP_002113057.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|194709870|gb|ACF89091.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. CVM19633]
 gi|197291712|gb|EDY31062.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Schwarzengrund str. SL480]
 gi|322615804|gb|EFY12724.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315996572]
 gi|322620652|gb|EFY17512.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-1]
 gi|322621719|gb|EFY18569.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-3]
 gi|322627445|gb|EFY24236.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 495297-4]
 gi|322630751|gb|EFY27515.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-1]
 gi|322638029|gb|EFY34730.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 515920-2]
 gi|322641318|gb|EFY37958.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 531954]
 gi|322647653|gb|EFY44138.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. NC_MB110209-0054]
 gi|322651487|gb|EFY47864.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. OH_2009072675]
 gi|322658783|gb|EFY55040.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 19N]
 gi|322661774|gb|EFY57990.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 81038-01]
 gi|322666479|gb|EFY62657.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MD_MDA09249507]
 gi|322672362|gb|EFY68474.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 414877]
 gi|322676326|gb|EFY72397.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 366867]
 gi|322679581|gb|EFY75626.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 413180]
 gi|322684292|gb|EFY80296.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 446600]
 gi|323191775|gb|EFZ77024.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609458-1]
 gi|323198956|gb|EFZ84054.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 556150-1]
 gi|323201022|gb|EFZ86091.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 609460]
 gi|323209419|gb|EFZ94352.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 507440-20]
 gi|323216636|gb|EGA01361.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB101509-0077]
 gi|323219866|gb|EGA04345.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB102109-0047]
 gi|323228721|gb|EGA12850.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB111609-0052]
 gi|323236665|gb|EGA20741.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009083312]
 gi|323239834|gb|EGA23881.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 2009085258]
 gi|323242118|gb|EGA26147.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. 315731156]
 gi|323247441|gb|EGA31396.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323250542|gb|EGA34424.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323259272|gb|EGA42914.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323263849|gb|EGA47370.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008284]
 gi|323265555|gb|EGA49051.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270001|gb|EGA53449.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|62178610|ref|YP_215027.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|167550782|ref|ZP_02344539.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|168243563|ref|ZP_02668495.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|194447430|ref|YP_002044012.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197248475|ref|YP_002145027.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|198245825|ref|YP_002214000.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|200387244|ref|ZP_03213856.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|224581883|ref|YP_002635681.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|62126243|gb|AAX63946.1| isoleucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|194405734|gb|ACF65953.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL476]
 gi|197212178|gb|ACH49575.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Agona str. SL483]
 gi|197940341|gb|ACH77674.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. CT_02021853]
 gi|199604342|gb|EDZ02887.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Virchow str. SL491]
 gi|205324429|gb|EDZ12268.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Saintpaul str. SARA29]
 gi|205337443|gb|EDZ24207.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Heidelberg str. SL486]
 gi|224466410|gb|ACN44240.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|322713061|gb|EFZ04632.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. A50]
 gi|326621743|gb|EGE28088.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Dublin str. 3246]
 gi|326626409|gb|EGE32752.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 956

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 590 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 643 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 674


>gi|205351389|ref|YP_002225190.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207855562|ref|YP_002242213.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|84029565|sp|Q57TL5|SYI_SALCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782430|sp|B5R1N6|SYI_SALEP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782431|sp|B5RF43|SYI_SALG2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|205271170|emb|CAR35957.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|206707365|emb|CAR31637.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
          Length = 944

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 578 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 630

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 631 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 662


>gi|16759040|ref|NP_454657.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29140590|ref|NP_803932.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|81515838|sp|Q8Z9N2|SYI_SALTI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25292997|pir||AI0507 isoleucyl-tRNA synthetase [imported] - Salmonella enterica subsp.
           enterica serovar Typhi (strain CT18)
 gi|16501330|emb|CAD01201.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29136214|gb|AAO67781.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 944

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 578 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 630

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 631 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 662


>gi|326778239|ref|ZP_08237504.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
 gi|326658572|gb|EGE43418.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
          Length = 537

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 41/135 (30%), Gaps = 12/135 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A   + +     
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANNVTPQA-- 78

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
               +  +  +   +              R T   H  ++   +Q++   G  Y+     
Sbjct: 79  WCDKLVEEAWKPLWEHLDIAN----DDFIRTTEKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 151 EIIFDTSSIPNYGSF 165
                       G  
Sbjct: 135 PYCVGCEEYKLPGDL 149


>gi|292669612|ref|ZP_06603038.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648821|gb|EFF66793.1| leucine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 823

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++  E++E        + A   RL +L      
Sbjct: 565 EPFTNL-LTQGMVIKDGAKMSKSLGNVVSPEEIIE-------HYGADTARLFILFAAPVD 616

Query: 318 EPIDFTVQRLTEAEILLSK 336
             +D++ Q +  A   L++
Sbjct: 617 RDLDWSDQGVEGAFRFLNR 635


>gi|291320148|ref|YP_003515409.1| Isoleucyl tRNA synthetase [Mycoplasma agalactiae]
 gi|290752480|emb|CBH40452.1| Isoleucyl tRNA synthetase (Isoleucine tRNAligase) [Mycoplasma
           agalactiae]
          Length = 892

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I  H   L+ +G KMSKS GN +   +++       + + A ++RL +
Sbjct: 568 SVAYTHKSPYKQIVSHGFVLDSKGEKMSKSKGNVVDPLKVI-------KKYGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   ++ + + + +   +  K   T
Sbjct: 621 ANAEYTNDVNISDEIINQNSEIYRKIRNT 649


>gi|213615635|ref|ZP_03371461.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-2068]
          Length = 379

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 13  ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 65

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 66  VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 97


>gi|117621375|ref|YP_857263.1| hypothetical protein AHA_2755 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117562782|gb|ABK39730.1| hypothetical protein AHA_2755 [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 60

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 407 IAIEKLVQERLILLKMKKFSSAD-YIRKQLESKGF 440
             IE+L+ +R      K ++ AD   R +L   G 
Sbjct: 2   AEIEQLIVQRNQARADKNWA-ADAAARNRLTEMGI 35


>gi|56412319|ref|YP_149394.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197361256|ref|YP_002140891.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|81821363|sp|Q5PDL9|SYI_SALPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782432|sp|B5BLL0|SYI_SALPK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56126576|gb|AAV76082.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197092731|emb|CAR58154.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 944

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 578 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 630

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 631 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 662


>gi|225166021|ref|ZP_03727769.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2]
 gi|224799733|gb|EEG18214.1| methionyl-tRNA synthetase [Opitutaceae bacterium TAV2]
          Length = 520

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 11/126 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   ++ DV+ R  R    +     V  +T +D+      + +  +     
Sbjct: 15  VNGSPHLGHAYEKVLTDVIARFRRAMGDD-----VYFLTGVDEH---GQKVQQTAQKRGI 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + +Q+F      L         R T   H   +  L+Q +   G  Y+A    
Sbjct: 67  PPQQFCDEISQEFRAVCATLNISNDDF-IRTTEPRHKNVVRDLLQKLYDKGEIYKAEYTG 125

Query: 153 IFDTSS 158
            + T  
Sbjct: 126 FYSTRQ 131



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D H  G D++ P H         A  IE    +  H G+ ++ G KMSKS GNF+     
Sbjct: 250 DFHVIGKDILVPPHAVYWPIMLKALGIEPPRALLAH-GWWSINGSKMSKSTGNFV----- 303

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                     +    +R  ++
Sbjct: 304 --EPVSFAAQYGVDALRYFLI 322


>gi|213427309|ref|ZP_03360059.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E02-1180]
          Length = 931

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 565 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 617

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 618 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 649


>gi|206895720|ref|YP_002247393.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738337|gb|ACI17415.1| methionyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 638

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 62/354 (17%), Positives = 108/354 (30%), Gaps = 81/354 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H G+A   +  D L R  R         ++    +    I++ A ++  +     
Sbjct: 13  VNAEPHAGSAYTTVYADALARYHRLIG--DRTFFLTGTDEHGQNILKVANEKGIN----- 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  +  Q+F KD  R   ++     R T   H   +  +I+ +   G  Y    + 
Sbjct: 66  -PQEFVDQMAQKF-KDAWRFMRISNDDFIRTTEPRHEKVVQRVIEIMYEKGDIYLGTYQG 123

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMG---------TRVPEKYHK--------------KNPA 189
            +       YG       +E + G           V E+ +               +   
Sbjct: 124 WYCPKCETYYGE------NELENGNCPIHKTPVEFVSEESYFFKWSKYQDPLLELYRTNP 177

Query: 190 DFILWKRSTPMEPG--------------WESPWGRGRP--------GWHIEC----SAMS 223
           DF++   +   E                   PWG   P         W+       SA+ 
Sbjct: 178 DFVV-PATRLNEIKSFVERGLKDISVSRTSVPWGIPVPFDTKHTVYVWYDALINYISALG 236

Query: 224 SHYLGKVFD----IHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNLEGRK 277
               G+  +    +H  G D I  HH    A                 + +G+  + G+K
Sbjct: 237 YTDSGEKMEFWPGVHLIGKD-ILRHH---AALWPAMLMSLELPVPKRVVAHGWWLVSGQK 292

Query: 278 MSKSNGNFITINEL---LETKKFGGRSWPAPVIRLAMLMTHY-REPIDFTVQRL 327
           MSKS GN  +  +L   +E             +R  ML     R+  D +++ L
Sbjct: 293 MSKSVGNIFSPQDLVSHIENSVGLTEDIAVDALRYFMLAAGPQRDDADLSLEAL 346


>gi|188532859|ref|YP_001906656.1| isoleucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|254782403|sp|B2VGR6|SYI_ERWT9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188027901|emb|CAO95758.1| Isoleucyl-tRNA synthetase 1 [Erwinia tasmaniensis Et1/99]
          Length = 938

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSLGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYSGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|168023212|ref|XP_001764132.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684572|gb|EDQ70973.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 640

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 66/352 (18%), Positives = 101/352 (28%), Gaps = 90/352 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A P I  D L R  R     + V ++   TD         +    +     
Sbjct: 97  VNAAPHMGSAYPTIAADALARFQRLQG--RDVNFITG-TD-----EHGEKIALAAAAKGR 148

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
           A          ++      L   A     R T+   + +     + +   G  Y+A  E 
Sbjct: 149 APKEHCDAVAAEYQLLWKELGI-AYDKFIRTTDSHHETLVDEFYKRVEAKGDIYQAKYEG 207

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMG-----TRVPEKYHKKNPADFILWKRSTPMEP----- 202
           ++  +    Y     +  DE          R P +   ++   F L K   P+E      
Sbjct: 208 LYCVN-CEEY-----KDEDELIEDLCCPIHRKPCEARNEDNYFFALSKYQQPLEELLSSN 261

Query: 203 --------------GW-------------ESPWGRGRPG--------WHIECSAMSSHYL 227
                         GW                WG   P         W        S  L
Sbjct: 262 PNFVRPSFRMNEVQGWVKEGLRDFSISRAAVEWGIPVPTNPKQTIYVWFDALLGYISALL 321

Query: 228 GK--------------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
            +                 +H  G D++  H     A    AD     A ++ H GFL  
Sbjct: 322 PEGKEPILTNATERGWPASVHIIGKDILRFHAVYWPAMLMSADLPLPEA-VFGH-GFLTK 379

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +G KM KS GN I   EL+         +    +R   L     + I+F   
Sbjct: 380 DGLKMGKSLGNTIEPRELVS-------KFGPDSVRYYFL-----KEIEFGKD 419


>gi|297619713|ref|YP_003707818.1| isoleucyl-tRNA synthetase [Methanococcus voltae A3]
 gi|297378690|gb|ADI36845.1| isoleucyl-tRNA synthetase [Methanococcus voltae A3]
          Length = 1053

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 10/90 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+ +G KMSKS GN +  ++++         + A ++R 
Sbjct: 582 ALSELVFGDIPYKKCLMHGFTLDEKGEKMSKSLGNIVNPDDVIA-------KYGADILRF 634

Query: 310 AMLMTH--YREPIDFTVQRLTEAEILLSKW 337
            +L  +  + E + F    L E   +L+  
Sbjct: 635 YLLSANKAW-EDLRFAYSELEEVRSMLNTL 663


>gi|77166123|ref|YP_344648.1| leucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254436091|ref|ZP_05049598.1| leucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123730613|sp|Q3J7S8|SYL_NITOC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76884437|gb|ABA59118.1| leucyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089202|gb|EDZ66474.1| leucyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 819

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 49/145 (33%), Gaps = 39/145 (26%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +    L+E        + A   RL ++      + ++++ 
Sbjct: 565 LTQGMVLKDGAKMSKSKGNTVDPQALIE-------HYGADTARLFIMFAAPPEQSLEWSE 617

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDP-----------------------AVLSALYND--- 358
             +  A   L +  +   +    DP                         ++   +D   
Sbjct: 618 SGVEGAHRFLKRLWRIVAAHVEQDPKAALTLKVKDLNSEQKSFRAKVHETIAKASDDIGR 677

Query: 359 ---LNTVSAIQALHKLARESTKNHD 380
               NT  AI A+ +L     K  D
Sbjct: 678 RYTFNT--AIAAIMELMNALAKFDD 700


>gi|323223516|gb|EGA07841.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. MB110209-0055]
          Length = 854

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 488 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 540

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 541 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 572


>gi|296085083|emb|CBI28498.3| unnamed protein product [Vitis vinifera]
          Length = 84

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 32/70 (45%)

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
           N   ++DT       S     ++  K G RV     K+NPA+F+LWK   P E   ++PW
Sbjct: 2   NGSCLYDTPLYLAPTSHDSYPLENNKAGKRVDVDSRKRNPAEFVLWKNVRPSESSQDNPW 61

Query: 209 GRGRPGWHIE 218
                  H+E
Sbjct: 62  DFKISRRHVE 71


>gi|212702192|ref|ZP_03310320.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
 gi|212674397|gb|EEB34880.1| hypothetical protein DESPIG_00203 [Desulfovibrio piger ATCC 29098]
          Length = 837

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 42/109 (38%), Gaps = 11/109 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN +    ++         + A  +RL  L      
Sbjct: 572 EPFTNL-LTQGMVLKDGSKMSKSKGNVVDPTAMIA-------KYGADTVRLFCLFAAPPE 623

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS--ALYNDLNTVSA 364
              D++   +  +   L +  +    +     AV +  A  +D+ T  A
Sbjct: 624 RDFDWSDSGIEGSSRFLHRVWRLFMDEAERLSAVKACGAGADDVTTPEA 672


>gi|301095003|ref|XP_002896604.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
 gi|262108922|gb|EEY66974.1| leucyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
          Length = 885

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 51/183 (27%), Gaps = 27/183 (14%)

Query: 22  DPSNIRMYVC---GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            P+  + Y C    P      HIG+ R   + D + R  R               D+   
Sbjct: 42  SPNKKKPYYCLSMFPYPSGQLHIGHVRVYTISDCMARFKRMQGY-----------DVLHP 90

Query: 79  IIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
           +   A     E+ +I    + +  T  N  Q  K    L       +   T   P     
Sbjct: 91  MGWDAFGLPAENAAIERGISPADWTEANIAQAKKQLKALGI-RFDWEREVTTCAPDYYKW 149

Query: 136 IQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
            Q     +   G AY     +              +  ++D +    R      +++   
Sbjct: 150 TQWIFLQMFNKGLAYRKEALVNWDPVDKT----VLANEQVDAEGRSWRSGAIVEQRSLNQ 205

Query: 191 FIL 193
           + L
Sbjct: 206 WFL 208


>gi|238879800|gb|EEQ43438.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 973

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA-PVIRLAMLMTHYRE 318
               +  H    + +G+KMSKS GN  +  E +E  K     +     +RL +  ++Y++
Sbjct: 624 PFKKVITHGFITDGKGQKMSKSLGNVFSPREAIEGCKKPLTPYLGTDGLRLWVASSNYKQ 683

Query: 319 PIDFTVQRLTEAEILLSKWPQT 340
            + F+ + LT    +  K+  T
Sbjct: 684 DVSFSPEVLTRVSEVAKKYRVT 705


>gi|241958366|ref|XP_002421902.1| isoleucyl-tRNA synthetase, mitochondrial, putative [Candida
           dubliniensis CD36]
 gi|223645247|emb|CAX39895.1| isoleucyl-tRNA synthetase, mitochondrial, putative [Candida
           dubliniensis CD36]
          Length = 973

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA-PVIRLAMLMTHYRE 318
               +  H    + +G+KMSKS GN  +  E +E  K     +     +RL +  ++Y++
Sbjct: 624 PFKKVITHGFITDGKGQKMSKSLGNVFSPREAIEGCKKPLTPYLGTDGLRLWVASSNYKQ 683

Query: 319 PIDFTVQRLTEAEILLSKWPQT 340
            + F+ + LT    +  K+  T
Sbjct: 684 DVSFSPEVLTRVSEVAKKYRVT 705


>gi|148377486|ref|YP_001256362.1| isoleucyl-tRNA synthetase [Mycoplasma agalactiae PG2]
 gi|254782420|sp|A5IY09|SYI_MYCAP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148291532|emb|CAL58918.1| Isoleucyl tRNA synthetase (Isoleucine tRNAligase) [Mycoplasma
           agalactiae PG2]
          Length = 892

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I  H   L+ +G KMSKS GN +   +++       + + A ++RL +
Sbjct: 568 SVAYTHKSPYKQIVSHGFVLDSKGEKMSKSKGNVVDPLKVI-------KKYGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   ++ + + + +   +  K   T
Sbjct: 621 ANAEYTNDVNISDEIINQNSEIYRKIRNT 649


>gi|57242363|ref|ZP_00370302.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57017043|gb|EAL53825.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 626

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 15/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R         ++    +   KI + A+ +      N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLSG--HKTLFLTGTDEHGQKIEQAAKNK------NY 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANN 150
           +      K + +F K              R T+   + I  ++     +   G  Y+   
Sbjct: 63  SPKEYADKISLEFKKLWDEFEISY-DIYARTTD--ERHIKFVKQVFLKMWEKGDIYKGEY 119

Query: 151 EIIFDTS 157
           E  +  S
Sbjct: 120 EGYYCVS 126


>gi|68485674|ref|XP_713215.1| potential mitochondrial tRNA-isoleucine synthetase [Candida
           albicans SC5314]
 gi|46434696|gb|EAK94098.1| potential mitochondrial tRNA-isoleucine synthetase [Candida
           albicans SC5314]
          Length = 973

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA-PVIRLAMLMTHYRE 318
               +  H    + +G+KMSKS GN  +  E +E  K     +     +RL +  ++Y++
Sbjct: 624 PFKKVITHGFITDGKGQKMSKSLGNVFSPREAIEGCKKPLTPYLGTDGLRLWVASSNYKQ 683

Query: 319 PIDFTVQRLTEAEILLSKWPQT 340
            + F+ + LT    +  K+  T
Sbjct: 684 DVSFSPEVLTRVSEVAKKYRVT 705


>gi|68485567|ref|XP_713266.1| potential mitochondrial tRNA-isoleucine synthetase [Candida
           albicans SC5314]
 gi|46434748|gb|EAK94149.1| potential mitochondrial tRNA-isoleucine synthetase [Candida
           albicans SC5314]
          Length = 973

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA-PVIRLAMLMTHYRE 318
               +  H    + +G+KMSKS GN  +  E +E  K     +     +RL +  ++Y++
Sbjct: 624 PFKKVITHGFITDGKGQKMSKSLGNVFSPREAIEGCKKPLTPYLGTDGLRLWVASSNYKQ 683

Query: 319 PIDFTVQRLTEAEILLSKWPQT 340
            + F+ + LT    +  K+  T
Sbjct: 684 DVSFSPEVLTRVSEVAKKYRVT 705


>gi|295098546|emb|CBK87636.1| Isoleucyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 938

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 660


>gi|294944613|ref|XP_002784343.1| Leucyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239897377|gb|EER16139.1| Leucyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1110

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 37/123 (30%), Gaps = 18/123 (14%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
             G DLI  H    +                 +  NG + ++  KMSKS GNF+T+++  
Sbjct: 704 CSGKDLIPNHLTMCLYSHAAIWEDRPDLWPQAFFTNGHVMVDDEKMSKSRGNFLTLDQAC 763

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                    + A   RLA+               L  A         +  S    D    
Sbjct: 764 G-------EFSADATRLALADAG---------DGLENANFKRKTANDSILSLTTFDNWAT 807

Query: 353 SAL 355
             +
Sbjct: 808 EVM 810


>gi|219681524|ref|YP_002467909.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|219682080|ref|YP_002468464.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|257471205|ref|ZP_05635204.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. LSR1
           (Acyrthosiphon pisum)]
 gi|254782372|sp|B8D8V0|SYI_BUCA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782373|sp|B8D754|SYI_BUCAT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219621813|gb|ACL29969.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
           (Acyrthosiphon pisum)]
 gi|219624367|gb|ACL30522.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. 5A
           (Acyrthosiphon pisum)]
 gi|311086464|gb|ADP66545.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. TLW03
           (Acyrthosiphon pisum)]
 gi|311087045|gb|ADP67125.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. JF99
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            +  + +  H   ++ +G+KMSKS GN I+ NE+++T         A ++RL +  ++Y 
Sbjct: 585 KKPYSEVLTHGFVVDGKGQKMSKSIGNTISPNEIVDTLG-------ADILRLWVASSNYS 637

Query: 318 EPIDFTVQRLTEAEILLSKWPQTST 342
             I  + + L  +  +  +   T+ 
Sbjct: 638 NDISISNEILKSSSDIYRRIRNTAR 662


>gi|154250743|ref|YP_001411567.1| isoleucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
 gi|154154693|gb|ABS61910.1| isoleucyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
          Length = 965

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 60/162 (37%), Gaps = 21/162 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   ++ +GRKMSKS GN I   +++E          A ++RL +
Sbjct: 612 SCGTRGRAPYKQVLTHGFTMDEKGRKMSKSLGNVIAPQKIVEQNG-------ADILRLWV 664

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSA--- 364
             T Y E  +   + +        K   T      +    D A   A+ +          
Sbjct: 665 ASTDYWEDHNIGNEIIKSNVEAYRKLRNTFRYLLGNLAGFDEAERVAVAD---MPELERS 721

Query: 365 ----IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
               +  L  L R++  ++D   + +  ++ + +++   + +
Sbjct: 722 ILHRLAELDDLVRKAYADYDFKRVTHTLSNFMNVDLSAFYFD 763


>gi|15616769|ref|NP_239981.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
 gi|11134943|sp|P57249|SYI_BUCAI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|25293003|pir||C84947 isoleucine-tRNA ligase (EC 6.1.1.5) [imported] - Buchnera sp.
           (strain APS)
 gi|10038832|dbj|BAB12867.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. APS
           (Acyrthosiphon pisum)]
          Length = 940

 Score = 48.3 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 42/85 (49%), Gaps = 7/85 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            +  + +  H   ++ +G+KMSKS GN I+ NE+++T         A ++RL +  ++Y 
Sbjct: 585 KKPYSEVLTHGFVVDGKGQKMSKSIGNTISPNEIVDTLG-------ADILRLWVASSNYS 637

Query: 318 EPIDFTVQRLTEAEILLSKWPQTST 342
             I  + + L  +  +  +   T+ 
Sbjct: 638 NDISISNEILKSSSDIYRRIRNTAR 662


>gi|159042514|ref|YP_001541766.1| leucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|157921349|gb|ABW02776.1| leucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 983

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 11/105 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G+DLI  H    IA                 N ++  EGR+MSKS GN I + E +E  
Sbjct: 609 SGIDLISNHLSFFIAHHAAIFPERHWPRAISVNNYVIREGRRMSKSLGNVIYLKEAVE-- 666

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQ-RLTEAEILLSKWPQ 339
                 +   ++RL      Y   +D  +  R  E + +LS+   
Sbjct: 667 -----QYSPDLVRLY---VSYSADLDNVMDWRSDEVDTVLSRLMD 703


>gi|296271126|ref|YP_003653758.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
 gi|296093913|gb|ADG89865.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
          Length = 530

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 40/135 (29%), Gaps = 12/135 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V ++    +   KI+  A          +
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--ERVWFLTGTDEHGQKIMRTAEANG--TTPQE 78

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
               +     +   +              R T   H  ++   +Q++   G  Y+     
Sbjct: 79  WCDKLVETAWKPLWEHLEIAN----DDFIRTTEPRHTKRVQEFVQDLYDKGEIYKGGYEG 134

Query: 151 EIIFDTSSIPNYGSF 165
                     + G  
Sbjct: 135 PYCVGCEEYKSPGEL 149



 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/185 (15%), Positives = 54/185 (29%), Gaps = 57/185 (30%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G D++  H             A+ +     I+  NG+L + G KMSKSN   I+ 
Sbjct: 263 DVHLVGKDILRFH----AVIWPAMLMANGLPLPKKIFA-NGWLMVGGEKMSKSNLTGISP 317

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
            +L  T       +     R   L       I F        E   +++     +     
Sbjct: 318 RDLTGT-------FGVDAYRYYFLRA-----IPFGQDGSFSWEDFAARYTSELANDFGNL 365

Query: 349 PAVLSAL-------------------------------------YNDLNTVSAIQALHKL 371
            + ++A+                                      ++L+    I A+   
Sbjct: 366 ASRVAAMVGKYFGGTLPEATDAGPAEQAIADGLAAAAEQADRMIGDNLDFSGGIGAIFDF 425

Query: 372 AREST 376
            ++  
Sbjct: 426 IKQVN 430


>gi|33240397|ref|NP_875339.1| leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
 gi|48428531|sp|Q7VBZ5|SYL_PROMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33237924|gb|AAP99991.1| Leucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus str.
           CCMP1375]
          Length = 870

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 43/153 (28%), Gaps = 18/153 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R  ++ DV+ RL R       V +              A      I       I 
Sbjct: 62  HMGHVRNYVITDVIARLHRMKG--DSVLHPMGWDAFGLPAENAA------IERGIPADIW 113

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-IF 154
           T KN +       RL  L+       T    +     Q     +   G AY+ +  +   
Sbjct: 114 TYKNIEDMRNQLNRLG-LSIDWDKEVTTCKEEYYKWTQYIFLELYEAGLAYQKSATVNWD 172

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                      +  ++D      R      KK 
Sbjct: 173 PIDKT----VLANEQVDANGRSWRSGALVEKKK 201


>gi|311266560|ref|XP_003131142.1| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 213

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 49/160 (30%), Gaps = 49/160 (30%)

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--------------- 383
           +++   G    AV +AL +D NT  A+ A+ +L     +                     
Sbjct: 44  RSAHRLGRTKGAVQAALADDFNTPRAVDAVVELIHHGNRELKAAAEEPRGPRSPAVLGAL 103

Query: 384 --IFNASAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSS-------- 427
                     +GI + +            +   +E+LV+ R  + +   F+         
Sbjct: 104 VSFVEQFFETVGISLAERQRAAGAGSPAALHSVVEELVRFRQTVRR---FALAAGEAAGE 160

Query: 428 ---------------ADYIRKQLESKGFILEDYKNPDNGQ 452
                           D +R+ L + G  ++D  +    +
Sbjct: 161 ARRRQLQERRALLEACDALRRDLSAHGVRIKDRSDVSTWE 200


>gi|242278126|ref|YP_002990255.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242121020|gb|ACS78716.1| leucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 831

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 47/120 (39%), Gaps = 13/120 (10%)

Query: 230 VFDIHGGGLDLIFPHHENE-----IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             D + GG++    H         I +      + +     +  G +  +G KMSKS GN
Sbjct: 532 PVDQYIGGIEHAILHLLYARFFTKILRDEGYTELSEPFKNLLTQGMVLKDGAKMSKSKGN 591

Query: 285 FITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
            +  N ++         + A   RL +L  +   + ++++ Q L  A   L++  + +  
Sbjct: 592 VVDPNAMIN-------KYGADATRLFILFASPPEKDLEWSDQGLEGAHRFLNRIWRLAEE 644


>gi|269958746|ref|YP_003328533.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848575|gb|ACZ49219.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 593

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/323 (18%), Positives = 106/323 (32%), Gaps = 73/323 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  DVL  LL +   +    Y  N  D   +I       +     
Sbjct: 152 PT--GPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVN--DAGGQINTLVESVYLRYKE 207

Query: 92  -INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIIL 141
            + + ++I       +++K   +        +  A+           +  ++ LI+  + 
Sbjct: 208 ALGEQVTIGEGLYPGEYLKPIAKALVEKHGDKLLASEDRTAVIREFALKSILDLIREDMA 267

Query: 142 ------HGHAYEANNEIIFDTSSIPN---------YGSFSRRKIDEQKMGTRVPEKYHKK 186
                     YEA+ +                   YG+  R +  E++   +  E+   +
Sbjct: 268 LLGVKHDVFTYEADLQRSRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAAWQAREQLLFR 327

Query: 187 -----NPADFILWKRSTPMEPGWESPWG-------RGRPGWHIECSAMSSHYLGKVFDIH 234
                + +D  L K     +  W    G       +   G+H          LG  FD H
Sbjct: 328 STDFGDDSDRALQK----EDGSWTYFAGDIAYHFDKISRGFH-------DMILGLGFD-H 375

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EG--RKMSKSNGNFITINE 290
            G +  +        A        + T ++ +HN  +N    G   KMSK  G F+T  +
Sbjct: 376 KGYVSRL-------KAAVHALSDGKATIDVKLHN-MVNFLENGVPVKMSKRRGEFLTARD 427

Query: 291 LLETKKFGGRSWPAPVIRLAMLM 313
           ++E            V R  M+ 
Sbjct: 428 VVEEVGK-------DVARFIMMT 443


>gi|261418142|ref|YP_003251824.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767898|ref|YP_004133399.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374599|gb|ACX77342.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112764|gb|ADU95256.1| leucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 805

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 59/137 (43%), Gaps = 13/137 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 557 KEPFQKLFNQGMILGENNEKMSKSKGNVVNPDDIIESHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++ + L  A   L + W    T  G ++P ++    ND  T+   +  H+  ++ 
Sbjct: 610 EASIAWSTKGLDGARRFLDRVWRLFVTENGELNPNIVDEPAND--TLE--RVYHQTVKKV 665

Query: 376 TKNHDLLPIFNASAHIL 392
           T++++ L    A + ++
Sbjct: 666 TEDYEALRFNTAISQLM 682


>gi|120602905|ref|YP_967305.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166231603|sp|A1VEL2|SYL_DESVV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120563134|gb|ABM28878.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 829

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 23/179 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEI----AQSCCAD--RIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H         A   C      E  AN+ +  G + ++G KMSKS G
Sbjct: 529 PVDQYIGGVEHAILHLLYSRFFTKALRDCGFIELDEPFANL-LTQGMVLMDGSKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   E++         + A  +RL  L         D++   +  +   + +  +   
Sbjct: 588 NVVDPTEMIAR-------YGADTVRLFCLFAAPPERDFDWSESGIEGSYRFVGRVWRLVE 640

Query: 343 S--KGIIDPAVLSALYNDLNTVSA----IQALHKLARESTKNHDLLPIFN-ASAHILGI 394
              + ++     S+   D  T  A    ++  H   R++  + +    FN A A ++ +
Sbjct: 641 ELREHLLAVGACSSTAEDAKTPVARELRLKE-HATVRKAGDDLNDRFQFNTAIAAVMEL 698


>gi|292490669|ref|YP_003526108.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
 gi|291579264|gb|ADE13721.1| leucyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
          Length = 819

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 66/207 (31%), Gaps = 48/207 (23%)

Query: 220 SAMSSH--YLGKVFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFL 271
           +AM     +     D + GG++    H                    E   ++ +  G +
Sbjct: 512 AAMVDERGHYWLPVDQYIGGIEHAVLHLLYARFFHKVMRDMGLVRGDEPFTHL-LTQGMV 570

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEA 330
             +G KMSKS GN +    L+E        + A   RL ++      + ++++   +  A
Sbjct: 571 LKDGAKMSKSKGNTVDPQALIE-------QYGADTARLFIMFAAPPEQSLEWSESGVEGA 623

Query: 331 EILLSKW-----PQTSTSKGIIDPAVLSAL------------------YND------LNT 361
              L +         +  +G + P  +  L                   +D       NT
Sbjct: 624 HRFLKRLWRMVATHVAQRQGSVPPLEVKTLSAEQKLLRTKVHETIVKASDDIGRRYTFNT 683

Query: 362 VSAIQALHKLARESTKNHDLLPIFNAS 388
             AI A+ +L     K  D  P   A 
Sbjct: 684 --AIAAVMELMNALAKLDDDTPQGQAV 708


>gi|260431128|ref|ZP_05785099.1| isoleucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260414956|gb|EEX08215.1| isoleucyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 972

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 54/163 (33%), Gaps = 21/163 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   E++       R + A ++RL 
Sbjct: 626 QACGTIGRAPYRNVVTHGFTLDEKGNKMSKSLGNTIVPEEVI-------RQYGADILRLW 678

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA------ 364
           +  T Y        + L        +   T             A   D    +       
Sbjct: 679 VAQTDYTADQRIGPEILKGVADSYRRLRNTMRFMLGSLADFTEADRID---PAEMPRLER 735

Query: 365 -----IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                +  L +  R+     D   +F+A  +   +++   + +
Sbjct: 736 WVLSRLAELDEQVRKGYAAFDFQGVFSAVFNFATVDLSAFYFD 778


>gi|325977354|ref|YP_004287070.1| leucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177282|emb|CBZ47326.1| leuS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
          Length = 833

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     L A+    NT  AI  L      + K
Sbjct: 662 DRIYRLLTTKEIVAENNGNLDKVYNETVKAVTEQLEAM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              L   +      L +     HL++ +
Sbjct: 718 EDKLFADYAKGFVQL-LAPFAPHLSEEL 744


>gi|303328459|ref|ZP_07358896.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302861453|gb|EFL84390.1| isoleucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 947

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++  H   ++ EGRKMSKS GN I   EL+E        + A ++RL +
Sbjct: 582 SEGTRGRPPYRSVLTHGYVVDGEGRKMSKSIGNVIAPQELIE-------KFGAEIVRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YRE I  + Q L        +   T
Sbjct: 635 SSVEYREDIRISDQILGRLVDAYRRIRNT 663


>gi|303247249|ref|ZP_07333523.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302491408|gb|EFL51296.1| isoleucyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 940

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 29/168 (17%)

Query: 194 WKRSTPMEPGW-ESP-----WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
           W++ T +   W +S          RP    E +  ++ YL +  D H G        H +
Sbjct: 532 WRKETDILDVWFDSGTSFAAVLEKRP----ELAFPANLYL-EGSDQHRGWF------HSS 580

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
            +A S           +  H   ++ EGRKMSKS GN I   E+++          A ++
Sbjct: 581 LLA-SLATRGTPPYRQVLTHGYVVDGEGRKMSKSLGNGIEPQEIIDKHG-------AEIL 632

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAV 351
           RL      YR+ I  + + L+       +   T      +    DPAV
Sbjct: 633 RLWTSAVDYRDDIRLSEEILSRLVEAYRRIRNTCRFVLGNLSDFDPAV 680


>gi|222475202|ref|YP_002563618.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
 gi|222419339|gb|ACM49362.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
          Length = 593

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/323 (18%), Positives = 106/323 (32%), Gaps = 73/323 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  DVL  LL +   +    Y  N  D   +I       +     
Sbjct: 152 PT--GPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVN--DAGGQINTLVESVYLRYKE 207

Query: 92  -INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIIL 141
            + + ++I       +++K   +        +  A+           +  ++ LI+  + 
Sbjct: 208 ALGEQVTIGEGLYPGEYLKPIAKALVEKHGDKLLASEDRTAVIREFALKSILDLIREDMA 267

Query: 142 ------HGHAYEANNEIIFDTSSIPN---------YGSFSRRKIDEQKMGTRVPEKYHKK 186
                     YEA+ +                   YG+  R +  E++   +  E+   +
Sbjct: 268 LLGVKHDVFTYEADLQRSRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAAWQAREQLLFR 327

Query: 187 -----NPADFILWKRSTPMEPGWESPWG-------RGRPGWHIECSAMSSHYLGKVFDIH 234
                + +D  L K     +  W    G       +   G+H          LG  FD H
Sbjct: 328 STDFGDDSDRALQK----EDGSWTYFAGDIAYHFDKISRGFH-------DMILGLGFD-H 375

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EG--RKMSKSNGNFITINE 290
            G +  +        A        + T ++ +HN  +N    G   KMSK  G F+T  +
Sbjct: 376 KGYVSRL-------KAAVHALSDGKATIDVKLHN-MVNFLENGVPVKMSKRRGEFLTARD 427

Query: 291 LLETKKFGGRSWPAPVIRLAMLM 313
           ++E            V R  M+ 
Sbjct: 428 VVEEVGK-------DVARFIMMT 443


>gi|157147566|ref|YP_001454885.1| isoleucyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
 gi|166200204|sp|A8ALT6|SYI_CITK8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157084771|gb|ABV14449.1| hypothetical protein CKO_03366 [Citrobacter koseri ATCC BAA-895]
          Length = 938

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 660


>gi|78223503|ref|YP_385250.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|123770264|sp|Q39T99|SYL_GEOMG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78194758|gb|ABB32525.1| leucyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 824

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 69/181 (38%), Gaps = 30/181 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 529 SVDQYIGGIEHAVLHLLYARFFTKALRDLGYVTVDEPFTNL-LTQGMVIKDGAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK------ 336
           N +  + L+         + A   RL  +      + +D++ Q +  +   LS+      
Sbjct: 588 NVVDPDALINR-------YGADTARLFSLFAAPPEKDLDWSDQGVDGSYRFLSRVWRLVC 640

Query: 337 -WPQTSTSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFN-ASAHILG 393
                    G +D A   +L +D      + +A+HK  R+ T + D    FN A A I+ 
Sbjct: 641 DLLPFVGKGGAVDSA---SLSDD---ARGLRRAVHKTIRKVTDDIDERFHFNTAIAAIME 694

Query: 394 I 394
           +
Sbjct: 695 L 695


>gi|320540430|ref|ZP_08040080.1| isoleucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320029361|gb|EFW11390.1| isoleucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 938

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  E++             ++RL 
Sbjct: 576 ISTAMKGKAPYREVLTHGFTVDGQGRKMSKSIGNTVSPQEVMNKPG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  A     +   T+ 
Sbjct: 629 VASTDYTGEIAVSDEILKRAADSYRRIRNTAR 660


>gi|294139773|ref|YP_003555751.1| isoleucyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293326242|dbj|BAJ00973.1| isoleucyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 940

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EYQGHGIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSVGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPQTITNKLG-------ADILRLWVAGTDYSGEMTVSDEILKRSADSYRRIRNTTR 663


>gi|227329317|ref|ZP_03833341.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 921

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 560 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 612

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 613 IGSTDYSGEIAVSDEILKRSADAYRRIRNTAR 644


>gi|261823081|ref|YP_003261187.1| isoleucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261607094|gb|ACX89580.1| isoleucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 937

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN I+  ++            A ++RL 
Sbjct: 576 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVTNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 IGSTDYSGEIAVSDEILKRSADAYRRIRNTAR 660


>gi|253690014|ref|YP_003019204.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511510|sp|C6DF04|SYI_PECCP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|251756592|gb|ACT14668.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 937

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 IGSTDYSGEIAVSDEILKRSADAYRRIRNTAR 660


>gi|218779617|ref|YP_002430935.1| isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218761001|gb|ACL03467.1| Isoleucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 932

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 40/97 (41%), Gaps = 11/97 (11%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   ++ +GRKMSKS GN I   +++++         A ++RL +    Y
Sbjct: 583 GKAPYKAVLTHGFVVDAKGRKMSKSVGNVIAPGKVIKSHG-------AEILRLWVSAADY 635

Query: 317 REPIDFTVQRLTEAEILLSKWPQT----STSKGIIDP 349
           R+ I  + + L +      +   T      + G  DP
Sbjct: 636 RDDIRISDEILKQLSDAYRRIRNTCRFILGNLGDFDP 672


>gi|281356569|ref|ZP_06243060.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
 gi|281316696|gb|EFB00719.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
          Length = 646

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ DVL R  R    +   T+    TD         + E  +     
Sbjct: 15  VNDKPHIGHAYTTILADVLARYYRSLNVD---TFFLTGTD-----EHGQKVEKAAAKRGV 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      +   +F +   RL         R T+  H   +  ++Q +      Y+A    
Sbjct: 67  SPKQQADETVVRFQELWKRLGITN-DRFIRTTDEYHKEVVREILQELYDRDEIYKAEYTG 125

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 126 WYCVGCERFY 135



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 68/189 (35%), Gaps = 40/189 (21%)

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP- 319
            A+ W   G       KMSKS GN +   +++E              R  +L      P 
Sbjct: 287 FAHGWWLTG-----NTKMSKSLGNVVNPMDMIEKCGV-------DAFRYFLLSE--MSPG 332

Query: 320 --IDFTVQ---------RLTEAEILLSK-WPQTSTSKGIID-PAVLSALYNDLN--TVSA 364
              +F+ +            +   LLS+    T  S G+I  PA L+A   +LN    +A
Sbjct: 333 NDANFSEESFVARYNSDLANDLGNLLSRVLKMTLRSGGVIQPPAELNADDLELNREVETA 392

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK- 423
           I A+    +    +  L  + NA      +     +L K        L ++  +      
Sbjct: 393 IAAMETSLKAMKFDQGLNAVMNA------VRAGNRYLEKTAPW---ALAKKGEVARLNTV 443

Query: 424 KFSSADYIR 432
            +++AD +R
Sbjct: 444 LYTAADALR 452


>gi|312136980|ref|YP_004004317.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311224699|gb|ADP77555.1| leucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 931

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I         +K     +  G   LEG+KMS S GN +T++
Sbjct: 557 PLDWRLSAKDLIGNHLTFHIFHHSAIFPEDKWPKGIVVFGMGLLEGQKMSSSKGNIVTLS 616

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT 314
           E +         + A V+R+ ++ +
Sbjct: 617 EAIS-------EYGADVVRMFLMSS 634



 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/112 (15%), Positives = 32/112 (28%), Gaps = 16/112 (14%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-----D 74
             D   I + V  P      H+G+ R   V DV  R  R            ++T      
Sbjct: 24  PNDKKKIFITVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVLFPMAWHVTGAPVVG 83

Query: 75  IDDKIIERA-----------RQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           I  +I  +            +     +        I    ++++ K   ++ 
Sbjct: 84  IAKRIERKDPWTLKTYKEVHKVPEDELKKFSDPHYIVEYFSKEYKKIMKKMG 135


>gi|227114256|ref|ZP_03827912.1| isoleucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 921

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 560 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 612

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 613 IGSTDYSGEIAVSDEILKRSADAYRRIRNTAR 644


>gi|152968602|ref|YP_001333711.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|150953451|gb|ABR75481.1| isoleucyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
          Length = 922

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 560 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 612

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 613 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 644


>gi|163750658|ref|ZP_02157895.1| isoleucyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161329653|gb|EDQ00644.1| isoleucyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 940

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 66/193 (34%), Gaps = 28/193 (14%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EYQGHGIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFVVDGKGRKMSKSVGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
            I    +            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQTITNKLG-------ADILRLWVAGTDYSGEMTVSDEILKRSADSYRRIRNTTR-- 663

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---AHILGIEVCKEHL 401
                  L A     N            +++    D++ +       A +L  E+ + + 
Sbjct: 664 ------FLLA-----NING-----FDPVKDAVAIDDMVALDRWVVRRAAVLQEEILEAYE 707

Query: 402 NKNISIAIEKLVQ 414
             N     +KLVQ
Sbjct: 708 QYNFHTVTQKLVQ 720


>gi|110668247|ref|YP_658058.1| leucyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109625994|emb|CAJ52439.1| leucine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 907

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 53/136 (38%), Gaps = 17/136 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A++      E   N+ +  G + L+G KMSKS G
Sbjct: 521 PVDQYVGGIEHAVMHLLYSRFFTKVLAENDDLAVTEPFENL-LAQGMVQLDGEKMSKSKG 579

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++   ++E        + A   RL M+         D++ + +     LL++  + + 
Sbjct: 580 NTVSPQRIVE-------EYGADTARLFMMQAAQPERDFDWSEEGVRSTNQLLTQLIELAD 632

Query: 343 SKGII--DPAVLSALY 356
               I  D AVL    
Sbjct: 633 VIADINVDRAVLENHD 648



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/99 (15%), Positives = 28/99 (28%), Gaps = 11/99 (11%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              DP+++  YV G   Y     H+G+ R   + D   R  R       V +        
Sbjct: 27  TPDDPADLT-YVLGMYPYPSGKLHMGHVRNYTITDAYARYRRMRG--DDVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                 A++   +          T    +   +    + 
Sbjct: 84  LPAENAAKERDTN------PRDWTYDCIETMREQMESMG 116


>gi|46579607|ref|YP_010415.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|60390718|sp|Q72CT7|SYL_DESVH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46449022|gb|AAS95674.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233411|gb|ADP86265.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 829

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 23/179 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEI----AQSCCAD--RIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H         A   C      E  AN+ +  G + ++G KMSKS G
Sbjct: 529 PVDQYIGGVEHAILHLLYSRFFTKALRDCGFIELDEPFANL-LTQGMVLMDGSKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   E++         + A  +RL  L         D++   +  +   + +  +   
Sbjct: 588 NVVDPTEMIAR-------YGADTVRLFCLFAAPPERDFDWSESGIEGSYRFVGRVWRLVE 640

Query: 343 S--KGIIDPAVLSALYNDLNTVSA----IQALHKLARESTKNHDLLPIFN-ASAHILGI 394
              + ++     S+   D  T  A    ++  H   R++  + +    FN A A ++ +
Sbjct: 641 ELREHLLAVGACSSTAEDAKTPVARELRLKE-HATVRKAGDDLNDRFQFNTAIAAVMEL 698


>gi|268680239|ref|YP_003304670.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268618270|gb|ACZ12635.1| leucyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 815

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 9/90 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
           +  E  AN+ +  G +  +G KMSKS GN +  + ++       +++ A   RL +L   
Sbjct: 564 NTDEPFANL-LTQGMVLKDGSKMSKSKGNTVDPDAII-------KTYGADTARLFILFAA 615

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
             ++ +++    +  A   L ++ Q S + 
Sbjct: 616 PPQKELEWNDSAVEGAFRFLKRFAQKSENA 645


>gi|288957547|ref|YP_003447888.1| isoleucyl-tRNA synthetase [Azospirillum sp. B510]
 gi|288909855|dbj|BAI71344.1| isoleucyl-tRNA synthetase [Azospirillum sp. B510]
          Length = 943

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 27/165 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN +   E+ +        + A ++RL +
Sbjct: 594 SCGTRGRAPYNAVLTHGFVLDEQGRKMSKSLGNVVAPQEVCD-------QYGADILRLWI 646

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPAVLSALYNDLNTVSA 364
           + + Y E +    + +     L  +   T           G  +    + +         
Sbjct: 647 INSDYSEDLRIGKEIIKTQADLYRRLRNTLRYLLGALADYGPAERIDAAEM------PEL 700

Query: 365 -------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                  +  L  L RE    +D   +F A  +   +E+   + +
Sbjct: 701 ERWVLHRLSELDTLVREKVDAYDFHALFVALHNFCAVELSAFYFD 745


>gi|313200359|ref|YP_004039017.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439675|gb|ADQ83781.1| leucyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 826

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 46/187 (24%)

Query: 230 VFDIHGGGLDLIFPHHE-----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             D + GG++    H       N++ +     + ++  N  +  G +  +G KMSKS GN
Sbjct: 529 PVDQYIGGIEHAILHLLYARFFNKLMRDVGLLKNDEPFNKLLTQGMVLKDGSKMSKSKGN 588

Query: 285 FITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW------ 337
            +    L+E        + A   RL M+      + ++++   +  A   L +       
Sbjct: 589 TVDPQALIE-------QYGADTARLFMMFAAPPEQSLEWSDAGVEGAHRFLKRVWAAVAA 641

Query: 338 ---------PQTSTSKGIIDPAV----------LSALYND------LNTVSAIQALHKLA 372
                       +TS G ++  +          +  + +D       NT  AI A+ +L 
Sbjct: 642 HVEQGVVSAYSAATSTGELNAELKTLRRQLHLTIEKISDDYGRRHAFNT--AIAAVMELM 699

Query: 373 RESTKNH 379
               K  
Sbjct: 700 NAYAKLE 706


>gi|163733496|ref|ZP_02140939.1| isoleucyl-tRNA synthetase [Roseobacter litoralis Och 149]
 gi|161393284|gb|EDQ17610.1| isoleucyl-tRNA synthetase [Roseobacter litoralis Och 149]
          Length = 1009

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 57/184 (30%), Gaps = 26/184 (14%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   +++       + + A ++RL 
Sbjct: 663 QACGTMGRAPYRAVLTHGFTLDEKGMKMSKSLGNTVAPEKII-------QQYGADILRLW 715

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSA-- 364
           +    Y   +    + L        +   T      S         +A  +         
Sbjct: 716 VAQADYTVDLRIGPEILKGVADSYRRLRNTMRYMLGSLSDFSENDRTAPED---MPELER 772

Query: 365 -----IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI---EKLVQER 416
                +  L K  R+    +D   +F A      +++   + +          + L  +R
Sbjct: 773 WVLHRLAELDKTVRDGYAAYDFQGVFQAVFTFATVDLSAFYFDIRKDALYCDGDTL--QR 830

Query: 417 LILL 420
               
Sbjct: 831 RAAR 834


>gi|121601643|ref|YP_989109.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|120613820|gb|ABM44421.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 519

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R    ++   +  + TD         + +  +  +N 
Sbjct: 14  PNGAPHIGHAYNAIASDALARFQRL---DRKNVFFLSGTD-----EHGLKMQKTAEALNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEI 152
               +  +N+  F K  T L C       R T         +  + +  +G  Y      
Sbjct: 66  TPQQLADRNSALFQKMLTALNCSNDDF-IRTTEERHHQTCQVMWKKMEANGDIYLDRYAG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYSVRQESYY 134


>gi|298249716|ref|ZP_06973520.1| leucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297547720|gb|EFH81587.1| leucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 833

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/209 (17%), Positives = 71/209 (33%), Gaps = 38/209 (18%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLE 274
            ++  +L    D++ GG +    H       +     +      E        NG +  +
Sbjct: 549 VLARKWL--PVDMYIGGAEHSVLHLMYARFITKALHDLSLLEINEPFKRFRA-NGMITRD 605

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEIL 333
           G K+SKS GN I  ++ +E        + A V R   + M  Y    DF+ + ++     
Sbjct: 606 GAKISKSRGNIINPDDYIER-------FGADVFRVYLLFMGPYEGGGDFSDRGISGVVRF 658

Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           L +  +         P   S+L        AI+A+H   +  +++   L    A A I+ 
Sbjct: 659 LERAWRLVGRYAQHAPQAPSSL-------EAIRAMHITIKRVSEDTASLKYNTAIAAIM- 710

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKM 422
                          +  +++ R      
Sbjct: 711 -------------EYVNGIIERRAASKAE 726


>gi|269792312|ref|YP_003317216.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269099947|gb|ACZ18934.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 829

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN +  +E++       R + A   RL +L      
Sbjct: 567 EPFTNL-LTQGMVIKDGSKMSKSKGNVVDPDEII-------RRYGADTARLFILFAAPPE 618

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
           + +D++ + +  A   LS+  +     
Sbjct: 619 KDLDWSDKGVEGAHRFLSRVFRLVEEN 645



 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 42/159 (26%), Gaps = 16/159 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D++ R LR       V Y              A      +  
Sbjct: 40  PYPSGALHMGHLRNYSIGDLMARFLRMNGYN--VLYPMGFDAFGLPAENAA------LKF 91

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T KN +       ++ C     + R     P      Q         G AY  
Sbjct: 92  GVQPAEWTWKNIEHMTGQLKKMGCSY-DWRRRVETCNPDYYRWTQWLFLQFFKKGLAYRK 150

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
              +     S       +  ++ +     R      K+N
Sbjct: 151 EAPVN-WCESCKT--VLANEQVVDGGHCWRCGTAVTKRN 186


>gi|225019373|ref|ZP_03708565.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
 gi|224948004|gb|EEG29213.1| hypothetical protein CLOSTMETH_03326 [Clostridium methylpentosum
           DSM 5476]
          Length = 883

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 26/161 (16%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I  +          +++IH    + EGRKMSKS GN I   E++   
Sbjct: 494 TGYDIIFFWVCRMIFSAVEHTGQAPFEHVFIHGLVRDSEGRKMSKSLGNGIDPLEVIG-- 551

Query: 296 KFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  +   T+    + ++ +++  A    +K    +         ++  
Sbjct: 552 -----EYGADALRFMLANGTNAGNDMRYSDEKVKAARNFANKLWNATR-------FIMMN 599

Query: 355 LYNDLNTVS-----------AIQALHKLARESTKNHDLLPI 384
           + ++++TV             +  L+ L +E T N +   +
Sbjct: 600 ISDEVDTVELPSTLTIEDKWVLTQLNDLVKEMTDNLEKFEL 640


>gi|307155055|ref|YP_003890439.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306985283|gb|ADN17164.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 854

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 51/174 (29%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y      Y     H+G+ R  ++ DV+ RL R       V +        
Sbjct: 26  TPEDKTKPKYYALSMFPYPSGNLHMGHVRNYVITDVIARLKRMQG--HRVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   +L  L+       T   P      
Sbjct: 84  LPAENAA------IERGIHPAKWTYQNIAQMKQQLQQLG-LSIDWNREVTTCSPDYYKWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 137 QWLFLQFFQAGLAYQKEAAVNWDPIDQT---VLANEQVDAEGKSWRSGAKVERK 187


>gi|50122797|ref|YP_051964.1| isoleucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81827008|sp|Q6D0C3|SYI_ERWCT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49613323|emb|CAG76774.1| isoleucyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 937

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 576 ISTAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 IGSTDYSGEIAVSDEILKRSADAYRRIRNTAR 660


>gi|56416837|ref|YP_153911.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|255003182|ref|ZP_05278146.1| arginyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
 gi|255004313|ref|ZP_05279114.1| arginyl-tRNA synthetase [Anaplasma marginale str. Virginia]
 gi|81359057|sp|Q5PAM4|SYR_ANAMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|56388069|gb|AAV86656.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 579

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 59/323 (18%), Positives = 106/323 (32%), Gaps = 73/323 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  DVL  LL +   +    Y  N  D   +I       +     
Sbjct: 138 PT--GPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVN--DAGGQINTLVESVYLRYKE 193

Query: 92  -INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIIL 141
            + + ++I       +++K   +        +  A+           +  ++ LI+  + 
Sbjct: 194 ALGEQVTIGEGLYPGEYLKPIAKALVEKHGDKLLASEDRTAVIREFALKSILDLIREDMA 253

Query: 142 ------HGHAYEANNEIIFDTSSIPN---------YGSFSRRKIDEQKMGTRVPEKYHKK 186
                     YEA+ +                   YG+  R +  E++   +  E+   +
Sbjct: 254 LLGVKHDVFTYEADLQRSRTVEKCVEFLQQKGMLYYGTLERPRGVEEEAAWQAREQLLFR 313

Query: 187 -----NPADFILWKRSTPMEPGWESPWG-------RGRPGWHIECSAMSSHYLGKVFDIH 234
                + +D  L K     +  W    G       +   G+H          LG  FD H
Sbjct: 314 STDFGDDSDRALQK----EDGSWTYFAGDIAYHFDKISRGFH-------DMILGLGFD-H 361

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EG--RKMSKSNGNFITINE 290
            G +  +        A        + T ++ +HN  +N    G   KMSK  G F+T  +
Sbjct: 362 KGYVSRL-------KAAVHALSDGKATIDVKLHN-MVNFLENGVPVKMSKRRGEFLTARD 413

Query: 291 LLETKKFGGRSWPAPVIRLAMLM 313
           ++E            V R  M+ 
Sbjct: 414 VVEEVGK-------DVARFIMMT 429


>gi|68171729|ref|ZP_00545082.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88657921|ref|YP_507787.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|67998851|gb|EAM85550.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|88599378|gb|ABD44847.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 506

 Score = 48.3 bits (114), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+    ++ D++ R +R       V ++   TD   + IE+A QE      N 
Sbjct: 13  VNDVPHIGHVYTTLISDIIARFMRLDG--HSVKFITG-TDEHGQKIEKAAQER-----NM 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           ++   T   +  F +    +   +     R T   H   ++ L Q +  +G  Y  +   
Sbjct: 65  SLLDFTDNTSAVFRQLADVMN-YSYDDFIRTTETRHKKTVVALWQRLCDNGAIYLGSYSG 123

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 124 WYSVRDETFY 133


>gi|332982275|ref|YP_004463716.1| leucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332699953|gb|AEE96894.1| leucyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 824

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 47/131 (35%), Gaps = 15/131 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N+ +  G +  +G KMSKS G
Sbjct: 528 PVDQYVGGVEHAILHLLYSRFFTKVLHDLGLVDVNEPFVNL-LTQGMVLKDGSKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  ++++        + A   RL +L        ++++ Q +      L++  +   
Sbjct: 587 NIVSPEDIVD-------KYGADTARLFILFAAPPERDLEWSDQSVEGCFRFLNRVWRLVD 639

Query: 343 SKGIIDPAVLS 353
                    + 
Sbjct: 640 QYADAVKEWVE 650


>gi|54307796|ref|YP_128816.1| isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|81400140|sp|Q6LUL1|SYI_PHOPR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46912219|emb|CAG19014.1| putative Isoleucyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 954

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 60/170 (35%), Gaps = 21/170 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 560 EEYNGHSADLYLEGSDQHRGWFQSSLVSSVAMKGKAPYNQVLTHGFVVDGQGRKMSKSVG 619

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+  
Sbjct: 620 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR- 671

Query: 344 KGIIDPAVLSALY-----NDLNTVSAIQALHKLA--RESTKNHDLLPIFN 386
                   L+ L       DL     + AL + A  R      +++  ++
Sbjct: 672 ------FFLANLNGFNPETDLVAPEEMVALDRWAVGRAMEAQEEIIKAYD 715


>gi|324327794|gb|ADY23054.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 921

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV AI  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AIAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|320450854|ref|YP_004202950.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151023|gb|ADW22401.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 627

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 46/130 (35%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R    +   T+    TD   + + RA Q        +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARWHRLDGYQ---TFFLTGTDEHGETVYRAAQ-----RAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + +Q+F K    L   A     R T   H   +  ++Q +   G  Y    E 
Sbjct: 66  EPQAFVDRVSQRFRKAWELLGI-AYDDFIRTTEERHKRVVQRVLQRVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|321309739|ref|YP_004192068.1| isoleucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801583|emb|CBY92229.1| isoleucyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 869

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 20/146 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              NI  H   L+  G KMSKS GN I   E+          +   ++RL + M +Y E 
Sbjct: 561 PFKNIIAHGFALDGNGNKMSKSKGNVIDPIEI-------ANKYGIDILRLWIAMNNYLED 613

Query: 320 IDFTVQRLTEA-------EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH-KL 371
           I  +   L  A          L ++  + T     DP++L +L +  N    I +L  + 
Sbjct: 614 IKLSESSLESAISTYRKIRNTLFRYSLSVTENLSFDPSILGSLEDPKN--RYIYSLFLES 671

Query: 372 ARESTKNHDLLPIFNA---SAHILGI 394
            R+ +++ +    F A       L I
Sbjct: 672 YRKISEHLERFHFFRAIKEMMDFLNI 697


>gi|303238820|ref|ZP_07325352.1| leucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302593699|gb|EFL63415.1| leucyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 800

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 70/216 (32%), Gaps = 42/216 (19%)

Query: 195 KRSTPMEPGWE-SPWGRGR---PGWHIECSAMSSHYL--GKVFDIHGGGLDL-------- 240
           KR T   P W  S W   R   P  H E + ++   L      D + GG++         
Sbjct: 487 KRETDTMPQWAGSSWYFLRYIDP--HNEDALINEEKLKYWMPVDWYNGGMEHVTRHMIYS 544

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            F HH   +      +  E  A        L  +G KMSKS GN                
Sbjct: 545 RFWHH--FLYDIGVVNTPEPYAKRTAQGLILGPDGEKMSKSKGNV-------VDPLDVVD 595

Query: 301 SWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGI------IDPA 350
            + A V+R   + M  Y     ++   +   +  L +       +  +G       I   
Sbjct: 596 VFGADVLRTYVLFMGDYASAAPWSDSSVRGCKRFLERVANLYDIANGEGFTPELETIFNK 655

Query: 351 VLSALYND-----LNTVSAIQALHKLARESTKNHDL 381
            +  + ND      NT  AI AL  L  E   +  L
Sbjct: 656 TIKKVSNDIEEMKFNT--AIAALMGLINEIFDHGSL 689


>gi|253998286|ref|YP_003050349.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984965|gb|ACT49822.1| leucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 826

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 46/187 (24%)

Query: 230 VFDIHGGGLDLIFPHHE-----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             D + GG++    H       N++ +     + ++  N  +  G +  +G KMSKS GN
Sbjct: 529 PVDQYIGGIEHAILHLLYARFFNKLMRDVGLLKNDEPFNKLLTQGMVLKDGSKMSKSKGN 588

Query: 285 FITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK------- 336
            +    L+E        + A   RL M+      + ++++   +  A   L +       
Sbjct: 589 TVDPQALIE-------QYGADTARLFMMFAAPPEQSLEWSDAGVEGAHRFLKRVWAAVAA 641

Query: 337 --------WPQTSTSKGIIDPAV----------LSALYND------LNTVSAIQALHKLA 372
                       +TS G ++  +          +  + +D       NT  AI A+ +L 
Sbjct: 642 HVEHGVVSAYSAATSTGELNAELKTLRRQLHLTIEKISDDYGRRHAFNT--AIAAVMELM 699

Query: 373 RESTKNH 379
               K  
Sbjct: 700 NAYAKLE 706


>gi|229075033|ref|ZP_04208035.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228708090|gb|EEL60261.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 517

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 71/424 (16%), Positives = 129/424 (30%), Gaps = 76/424 (17%)

Query: 21  IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVTYVRN 71
             P+    +VC  G +     HIGN R ++    + R L       R+ +        R 
Sbjct: 14  KHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQNLGKKTRFIFSWDDYDRFRK 72

Query: 72  ITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP----R 124
           +    D    R     P   I D     +       ++F K                  R
Sbjct: 73  VPKNIDPSFAR-YIGMPYCDIPDPHGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQHAEYR 131

Query: 125 ATNHIPQMIYL---------IQNIILHGHAYEANNEIIFDTSSIPN-YGSFSR--RKIDE 172
           +  +   ++           I      G  +E + E  +  +      G  +    + DE
Sbjct: 132 SGRYNGNILEALHKRKEIYDILMRFKTGVHFEEDRENFYPVTLYCERCGKDATTITQFDE 191

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
                R   +   KN    +    +  M+  W+  W      W IE              
Sbjct: 192 VLETVRYACECGNKNELSVV---NTNKMKLNWKIDWPMR---WMIEDVIFEP-------- 237

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINE 290
              GG D         +++    +   + A  ++   F+ L+G   KMS S+GN IT ++
Sbjct: 238 ---GGRDHSSETGSYNVSKEIVREIFNREAPHYVAYDFIGLKGNHEKMSSSSGNSITPSD 294

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSKGII 347
           LL       + +   VI        YR    F     + +        +   +  ++ + 
Sbjct: 295 LL-------KVYVPEVILFMF--AKYRPGAAFHIGLDEDVIRNYTEYERLKDSYENEALK 345

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
           +  +  A+              KL R   +  +  P FN  A  L +      + +NI  
Sbjct: 346 NEDLFDAI--------------KLPRVDNRFKEY-PKFNQVASTLPLLNFDSSILQNILE 390

Query: 408 AIEK 411
            I++
Sbjct: 391 KIDR 394


>gi|159031023|emb|CAO88726.1| leuS [Microcystis aeruginosa PCC 7806]
          Length = 850

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 50/174 (28%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              +    + Y      Y     H+G+ R   + DV+ RL R       V +        
Sbjct: 24  TPENADKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFG 81

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   +L  L+   +       P+     
Sbjct: 82  LPAENAA------IERGVPPAKWTDQNIAQMKRQLQQLG-LSIDWEREVATCSPEYYRWT 134

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 135 QWLFLQFFESGLAYQKEAAVNWDPIDQT---VLANEQVDSEGKSWRSGAKVERK 185


>gi|304413765|ref|ZP_07395209.1| isoleucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304283856|gb|EFL92250.1| isoleucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 938

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 7/115 (6%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   DI+  G D       + +  +           +  H   ++ +GRKMSKS GN I+
Sbjct: 553 GHSPDIYLEGSDQHRGWFMSSLMIATAMKGKAPYRQVLTHGFTVDGKGRKMSKSIGNTIS 612

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             ++              ++RL +  T Y   I  + + L  +     +   T+ 
Sbjct: 613 PQDVTNKLG-------GDILRLWVASTDYSREIAVSDEILRRSADAYRRIRNTAR 660


>gi|78043727|ref|YP_359392.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|123743221|sp|Q3AEP2|SYI_CARHZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77995842|gb|ABB14741.1| isoleucyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 925

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +     +     +  H   ++ +GRKMSKS GN +   +++       +   A ++RL +
Sbjct: 572 AVATRGMAPYKAVLTHGFLVDEKGRKMSKSLGNVVDPLKVI-------KELGADILRLWV 624

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR  +  +   L +      K   T
Sbjct: 625 ASADYRSDLAISNNILKQTAEGYRKIRNT 653


>gi|313681840|ref|YP_004059578.1| valyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154700|gb|ADR33378.1| valyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 872

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 54/144 (37%), Gaps = 12/144 (8%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL--A 310
                     +I++H    +  G+KMSKS GN I   +++E        + A  +R   A
Sbjct: 510 ESFTGELPFNHIYLHALVRDEHGQKMSKSKGNVIDPLDMVE-------KYSADALRFTLA 562

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           +L    R  I  +  RL ++    +K    S    +  P        ++ T      L +
Sbjct: 563 VLAVQGR-DIRLSNDRLEQSRNFTNKLFNASKFLQMNVPTFKDLADQEITTPLGRYMLSR 621

Query: 371 LARESTKNHDLLPI--FNASAHIL 392
             R + +    L    FN +A +L
Sbjct: 622 FHRATAETRAFLDEYRFNDAATVL 645


>gi|296111094|ref|YP_003621475.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
 gi|295832625|gb|ADG40506.1| valyl-tRNA synthetase [Leuconostoc kimchii IMSNU 11154]
          Length = 894

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 21/140 (15%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           N+ IH    + EGRKMSKS GN +   +++E  
Sbjct: 495 TGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIE-- 552

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                 + A  +R  +       P   + FT  ++  A   ++K    S         V+
Sbjct: 553 -----KYGADALRWFLATGS--TPGQDVRFTYDKMDAAWNFINKIWNASRY-------VI 598

Query: 353 SALYNDLNTVSAIQALHKLA 372
             L +D  T S +  + KL+
Sbjct: 599 MNLDDD--TPSTLPDVDKLS 616


>gi|295106117|emb|CBL03660.1| methionyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 531

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 40/143 (27%), Gaps = 11/143 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I  D + R  R    +     V  +T +D+   + A           
Sbjct: 15  VNAAPHLGTAYTTIAADTVARYQRMNGYD-----VAFVTGMDEHGQKVADTAAAK---GM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                       F      L     T   R T   H   +    Q +   G  Y+ + E 
Sbjct: 67  TPQDWCDSMEPAFRDAWDMLGITY-TDFVRTTEPRHAKSVQKFWQELYDKGWCYKGSYEG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKM 175
            +       Y      K DE ++
Sbjct: 126 WYCVHEETYYAESDLEKNDEGQL 148


>gi|15674155|ref|NP_268330.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|81537370|sp|Q9CDP6|SYV_LACLA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12725235|gb|AAK06271.1|AE006446_3 valyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
          Length = 880

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/149 (26%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 459 GWPDENSADFIRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGKSPFHNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   +++E        + A  +R  +        + + F+  ++  A 
Sbjct: 517 EGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYDKMDAAW 568

Query: 332 ILLSKWPQTST-----SKGIIDPAVLSAL 355
             ++K    S      ++ I   AV SAL
Sbjct: 569 NFINKIWNVSRYILMNAEDISADAVSSAL 597


>gi|298675809|ref|YP_003727559.1| leucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288797|gb|ADI74763.1| leucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 964

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         +K       NGF++LEG KMSKS G  +T+N
Sbjct: 586 PVDLRSSGKDLVPNHLLFFLFHHVAIFDEDKWPQAIAVNGFVSLEGEKMSKSKGPLLTLN 645

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-------THYREPIDFTVQRLTEAEILLSKWPQTST 342
           + ++       ++ A + R+ +L          +R         +      + ++   + 
Sbjct: 646 DAVD-------NYGADISRVYILSNAEQTQDADWRS------SGIEATRKQIERFHNFAR 692

Query: 343 S 343
            
Sbjct: 693 E 693


>gi|239905094|ref|YP_002951833.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239794958|dbj|BAH73947.1| leucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 837

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H             +      E  AN+ +  G +  +G KMSKS G
Sbjct: 533 PVDQYIGGIEHAILHLLYSRFFVKALRDLGYVGFDEPFANL-LTQGMVIKDGSKMSKSKG 591

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  + ++         + A  +R+ +L      + ++++   +  A   LS+  +  T
Sbjct: 592 NVVDPDLMIG-------KYGADTVRVFILFAAPPEKDLEWSDTGIEGASRFLSRLWRLVT 644

Query: 343 SK 344
            +
Sbjct: 645 EE 646


>gi|116671171|ref|YP_832104.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611280|gb|ABK04004.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 554

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 56/310 (18%), Positives = 101/310 (32%), Gaps = 40/310 (12%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS--- 89
           PT     HIG+ R   + D + R+LR    +    Y  N       +  R+         
Sbjct: 134 PT--GPLHIGHTRWAALGDSIARVLRASGAKVTAEYYINDAGSQMNVFARSVLSRLHGRG 191

Query: 90  ----IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                   + IS +      +   D   L  +A     R   +  QM  +   +   G A
Sbjct: 192 VPEGGYPGEYISELGHHVLTE-HPDIRELTDVAALPVIRGAAYKAQMKDIKDTLADFGVA 250

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           +    ++ F    + + G+     +   +    V +           +W R+T      +
Sbjct: 251 F----DVYFSEQELHDAGAI-ESAVARLREQGHVFDDGG-------AVWLRTTDFGDDKD 298

Query: 206 SPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHH--ENEIAQSCCADRIE 259
                  G P +    +A       + FD  I+  G D    HH   N +     A   +
Sbjct: 299 RVMIRANGEPTYFAADAAYYLSKKDRGFDQKIYLLGAD----HHGYINRLKAIAAAAGDD 354

Query: 260 KTANIWIHNG-FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
             ANI +  G  +++ G K+SK  GN I + +L+              +R ++       
Sbjct: 355 PEANIEVLIGQLVSVNGAKLSKRAGNIIELKDLISWLGK-------DAVRYSLARFPADS 407

Query: 319 PIDFTVQRLT 328
           P+    + L 
Sbjct: 408 PLTLDPELLK 417


>gi|84514472|ref|ZP_01001836.1| isoleucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511523|gb|EAQ07976.1| isoleucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 964

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 66/209 (31%), Gaps = 26/209 (12%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M+  YL    D H G          + + Q+C          +  H   L+ +G KMSKS
Sbjct: 598 MADLYLEGT-DQHRGWFH-------SSMLQACGTKGHAPYRGVLTHGFTLDQKGMKMSKS 649

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GN I   +++       + + A ++RL +  + Y   +    + L        +   T 
Sbjct: 650 IGNTIAPEKVV-------QQYGADILRLWVAQSDYTADLRIGDEILKGVADSYRRLRNTM 702

Query: 342 T--SKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHIL 392
                 + D +    + +  +           I  L    RE    +D   +F A     
Sbjct: 703 RYMLGSLADFSESDRM-DPADMPELERWVLHRIAELDVTVREGYARYDFQGVFQAIFTFA 761

Query: 393 GIEVCKEHLNKNISIAI-EKLVQERLILL 420
            +++   + +        +     R    
Sbjct: 762 TVDLSAFYFDVRKDALYCDGDTARRRAAR 790


>gi|328950695|ref|YP_004368030.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
 gi|328451019|gb|AEB11920.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
          Length = 632

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 42/124 (33%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D L R  R    +   TY    TD   + I +A Q         
Sbjct: 14  VNAEPHIGHAYTTIVADYLARWHRLDGYD---TYFLTGTDEHGEKIAQAAQ-----KAGL 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +    L   A     R T   H   +  ++Q +   G  Y    E 
Sbjct: 66  EPKAFVDRVSARFREAWAALGI-AYDDFIRTTEERHKAVVRAVLQKVYDAGDIYYGEYEG 124

Query: 153 IFDT 156
           ++  
Sbjct: 125 LYCV 128


>gi|281413086|ref|YP_003347165.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281374189|gb|ADA67751.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 629

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D++ R  R+   +  V ++    +   K+++ A+Q        +
Sbjct: 12  VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFFLTGTDEHGQKVLQAAQQAGKDPQ--E 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  K  Q + +    L      +  R T+  H+  +   +  +  +G  Y+   + 
Sbjct: 68  FCDELAEKFKQLWKE----LKITN-DYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYKG 122

Query: 153 IFDT 156
            +  
Sbjct: 123 WYCV 126



 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            ++ H G+L + G+K+SKS GN I         +F  + +   V+R  ++    R+ +  
Sbjct: 284 KVFAH-GWLTVNGQKISKSLGNAI-------DPRFFVKRYGNDVVRYYLI----RDIMFG 331

Query: 321 ---DFTVQRL 327
              DF+ +RL
Sbjct: 332 KDGDFSEERL 341


>gi|148270780|ref|YP_001245240.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|147736324|gb|ABQ47664.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 629

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D++ R  R+   +  V ++    +   K+++ A+Q        +
Sbjct: 12  VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFFLTGTDEHGQKVLQAAQQAGKDPQ--E 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  K  Q + +    L      +  R T+  H+  +   +  +  +G  Y+   + 
Sbjct: 68  FCDELAEKFKQLWKE----LKITN-DYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYKG 122

Query: 153 IFDT 156
            +  
Sbjct: 123 WYCV 126



 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            ++ H G+L + G+K+SKS GN I         +F  + +   V+R  ++    R+ +  
Sbjct: 284 KVFAH-GWLTVNGQKISKSLGNAI-------DPRFFVKRYGNDVVRYYLI----RDIMFG 331

Query: 321 ---DFTVQRL 327
              DF+ +RL
Sbjct: 332 KDGDFSEERL 341


>gi|213053363|ref|ZP_03346241.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E00-7866]
          Length = 502

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 136 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 188

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 189 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 220


>gi|170289510|ref|YP_001739748.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170177013|gb|ACB10065.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 629

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D++ R  R+   +  V ++    +   K+++ A+Q        +
Sbjct: 12  VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFFLTGTDEHGQKVLQAAQQAGKDPQ--E 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  K  Q + +    L      +  R T+  H+  +   +  +  +G  Y+   + 
Sbjct: 68  FCDELAEKFKQLWKE----LKITN-DYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYKG 122

Query: 153 IFDT 156
            +  
Sbjct: 123 WYCV 126



 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            ++ H G+L + G+K+SKS GN I         +F  + +   V+R  ++    R+ +  
Sbjct: 284 KVFAH-GWLTVNGQKISKSLGNAI-------DPRFFVKRYGNDVVRYYLI----RDIMFG 331

Query: 321 ---DFTVQRL 327
              DF+ +RL
Sbjct: 332 KDGDFSEERL 341


>gi|148377630|ref|YP_001256506.1| leucyl-tRNA synthetase (leucine-tRNA ligase) [Mycoplasma agalactiae
           PG2]
 gi|148291676|emb|CAL59062.1| Leucyl tRNA synthetase (Leucine tRNA ligase) [Mycoplasma agalactiae
           PG2]
          Length = 779

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +  KMSKS GN ++  +LLE        + A  +RL +L      + ++++ 
Sbjct: 530 LTQGMVLKDSAKMSKSKGNTVSPTDLLE-------KYGADTVRLFILFAAPPAKELEWSD 582

Query: 325 QRLTEAEILLSKWPQT 340
             +      +++    
Sbjct: 583 DSVEGCNRFINRLYNL 598


>gi|213583817|ref|ZP_03365643.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. E98-0664]
          Length = 458

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 107 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 159

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 160 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 191


>gi|194751239|ref|XP_001957934.1| GF23767 [Drosophila ananassae]
 gi|190625216|gb|EDV40740.1| GF23767 [Drosophila ananassae]
          Length = 941

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 38/93 (40%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +   V+R  
Sbjct: 605 MSIAARDCAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGTDVLRWW 657

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   LSK   T
Sbjct: 658 VASHGTQHM--SITVSEKLLQQAAENLSKVRAT 688


>gi|322655028|gb|EFY51340.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Montevideo str. CASC_09SCPH15965]
          Length = 507

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 141 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 193

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  A     +   T+ 
Sbjct: 194 VASTDYTGEMAVSDEILKRAADSYRRIRNTAR 225


>gi|271962309|ref|YP_003336505.1| hypothetical protein Sros_0743 [Streptosporangium roseum DSM 43021]
 gi|270505484|gb|ACZ83762.1| hypothetical protein Sros_0743 [Streptosporangium roseum DSM 43021]
          Length = 437

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 24/45 (53%)

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
            +   +  L ++R      + ++ AD +R ++E++G+++ D  + 
Sbjct: 3   EVPPHVTGLAEQRAKARAGRDYAGADALRDKIEAEGWLVRDTGDG 47


>gi|258593868|emb|CBE70209.1| isoleucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 941

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   ++ EG+KMSKS GN +   E+++        + A ++RL +    Y
Sbjct: 592 GRAPYRAVLTHGFVVDGEGKKMSKSLGNVVAPQEVIDR-------YGAEILRLWVAAEDY 644

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+ I  + + L        +   T
Sbjct: 645 RDDIRISEEILKRLAEGYRRIRNT 668


>gi|88856857|ref|ZP_01131510.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88813927|gb|EAR23796.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 526

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 11/133 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +    ++   TD   + I R    + + P   
Sbjct: 16  VNDVPHIGHAYTEVAADVLARWHRQRGED---AWLLTGTDEHGQKILRTAVANNTTPQEW 72

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++     Q  ++              R T+  H   +   +Q +   GH Y    E 
Sbjct: 73  ADRLVADSW-QPLLETIDIAN----DDFIRTTDERHEKAVATFLQRLYDDGHIYAGEYEG 127

Query: 153 IFDTSSIPNYGSF 165
            +       Y   
Sbjct: 128 YYCVG-CEEYKQL 139


>gi|239942576|ref|ZP_04694513.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|239989037|ref|ZP_04709701.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
 gi|291446038|ref|ZP_06585428.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
 gi|291348985|gb|EFE75889.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
          Length = 537

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 41/141 (29%), Gaps = 24/141 (17%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN- 93
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     +     
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANDVTPQAWA 80

Query: 94  -----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
                +A   +              L   A     R T   H  ++   +Q++   G  Y
Sbjct: 81  DKLVEEAWKPLWEH-----------LNI-ANDDFIRTTEKRHTDRVQEFVQDLYDKGEIY 128

Query: 147 EA--NNEIIFDTSSIPNYGSF 165
           +                 G  
Sbjct: 129 KGGYEGPYCVGCEEYKLPGDL 149


>gi|222478802|ref|YP_002565039.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451704|gb|ACM55969.1| leucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 906

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 46/135 (34%), Gaps = 15/135 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A        E   N+ +  G + LEG KMSKS G
Sbjct: 538 PVDQYVGGIEHAVMHLLYSRFVTKVLADEEGLAHREPFTNL-LAQGMVQLEGEKMSKSKG 596

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++   +++        + A   RL ++         D+  + +      L++      
Sbjct: 597 NTVSPQRIVD-------EYGADTARLFIMQAAQPERDFDWAEEGVKSTHRFLARLTDLVE 649

Query: 343 SKGIIDPAVLSALYN 357
                +    S+  +
Sbjct: 650 EYAAGEAETASSDAD 664


>gi|311743181|ref|ZP_07716989.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
 gi|311313861|gb|EFQ83770.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
          Length = 529

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 10/154 (6%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+     + DVL R  R     + V Y+  + +   K++ +A      +   D
Sbjct: 15  VNDAPHIGHGYTTTIGDVLARWHRQRG--EQVHYLTGVDEHGQKVLRKAAAAG--VSPQD 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
            +  +     +  +               R T   H   +    + +   G  Y      
Sbjct: 71  WVDRLVETEWKPMLATIDASN----DDFIRTTEPRHARGVQAFWERLNEAGAVYRGEFSG 126

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +   S    G    R  +    G RV      +
Sbjct: 127 WYSVGSEEFVGDDDVRDGEGDDAGHRVSVLDGSR 160


>gi|156740388|ref|YP_001430517.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
 gi|156231716|gb|ABU56499.1| valyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
          Length = 907

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 19/109 (17%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +++H    + +GRKMSK+ GN +   ++++        + A  +R  + 
Sbjct: 520 CYLTGEPPFHTVYLHGLVRDKDGRKMSKTYGNVVNPLDVID-------QYGADALRFTLA 572

Query: 313 MTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
            +    P   ++   +R+  A    +K    +         VLS L +D
Sbjct: 573 TSS--SPGQDLNLNPERIESARNFANKLWNMTR-------FVLSKLDDD 612


>gi|222100458|ref|YP_002535026.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572848|gb|ACM23660.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 643

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 47/124 (37%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D++ R  R+   +  V ++    +   K+++ A+Q         
Sbjct: 26  VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFFLTGTDEHGQKVLQAAQQAGKDPQ--K 81

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  K  Q + +    L      H  R T+  H+  +   +  +  +G  Y+   + 
Sbjct: 82  FCDELAEKFKQLWKE----LKITN-DHFIRTTDETHMKTVQEFVAKMKENGDVYKGVYKG 136

Query: 153 IFDT 156
            +  
Sbjct: 137 WYCV 140



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            ++ H G+L + G+K+SKS GN I         +F  + +   V+R  ++    R+ +  
Sbjct: 298 KVFAH-GWLTVNGQKISKSLGNAI-------DPRFFVKRYGNDVVRYYLI----RDIVFG 345

Query: 321 ---DFTVQRL 327
              DF+ +RL
Sbjct: 346 KDGDFSEERL 355


>gi|295691571|ref|YP_003595264.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
 gi|295433474|gb|ADG12646.1| leucyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
          Length = 861

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 40/140 (28%), Gaps = 13/140 (9%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           I+    + YV    P      H+G+ R   + DV+ R  R       V +     D    
Sbjct: 28  INDGRPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFN--VLHPMGW-DAFGM 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
             E A  E    P        T  N     +    L       +  AT    +  +    
Sbjct: 85  PAENAAMERGVHPKG-----WTYDNIAAMREQLKALGISIDWSREFATCDPEYYGKQQAW 139

Query: 136 IQNIILHGHAYEANNEIIFD 155
              ++  G  Y     + +D
Sbjct: 140 FLRLLKRGLVYRKEASVNWD 159


>gi|255722089|ref|XP_002545979.1| hypothetical protein CTRG_00760 [Candida tropicalis MYA-3404]
 gi|240136468|gb|EER36021.1| hypothetical protein CTRG_00760 [Candida tropicalis MYA-3404]
          Length = 974

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 10/110 (9%)

Query: 266 IHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPA-PVIRLAMLMTHYREPIDFT 323
           I +GF+    G+KMSKS GN  +  E +E  K     +     +RL +  ++YR+ + FT
Sbjct: 630 ITHGFITDGKGQKMSKSIGNVFSPKEAIEGCKKPLTPYLGTDGLRLWVASSNYRQDVSFT 689

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            + LT       +  +      I    +L  L +D     A + L  L +
Sbjct: 690 PEVLT-------RVSEVGKKYRITFKYLLGNL-HDFVEPVAYEQLSDLDK 731


>gi|15679505|ref|NP_276622.1| leucyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
 gi|3122908|sp|O27552|SYL_METTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2622626|gb|AAB85983.1| leucyl-tRNA synthetase [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 937

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I                +  G   LEG KMS S GN I + 
Sbjct: 562 PLDWRLSAKDLIGNHLTFHIFHHSAIFPESGWPRGAVVFGMGLLEGNKMSSSKGNVILLR 621

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT 314
           + +E          A V+RL ++ +
Sbjct: 622 DAIEKHG-------ADVVRLFLMSS 639


>gi|166367300|ref|YP_001659573.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166089673|dbj|BAG04381.1| leucyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 850

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 50/174 (28%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              +    + Y      Y     H+G+ R   + DV+ RL R       V +        
Sbjct: 24  TPENADKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFG 81

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   +L  L+   +       P+     
Sbjct: 82  LPAENAA------IERGVPPAKWTDQNIAQMKRQLQQLG-LSIDWEREVATCSPEYYRWT 134

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 135 QWLFLQFFESGLAYQKEAAVNWDPIDQT---VLANEQVDSEGKSWRSGAKVERK 185


>gi|313681372|ref|YP_004059110.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154232|gb|ADR32910.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 526

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-DIDDKIIERARQEHPSIP 91
           PT     HIG+AR  +  D + RL R+   +    Y  N   +  D +    + E  S  
Sbjct: 114 PT--GPLHIGHARGAVYGDTMLRLGRHLGYDITAEYYVNDAGNQIDLLGVSLQLEGRSSL 171

Query: 92  INDAISIITSKNTQQFVKDTTR 113
           + +++         +++ D  R
Sbjct: 172 LGESVEWPEKYYRGEYLSDLAR 193


>gi|269138540|ref|YP_003295240.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267984200|gb|ACY84029.1| methionyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304558556|gb|ADM41220.1| Methionyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 682

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 71/205 (34%), Gaps = 34/205 (16%)

Query: 224 SHYLGKVFDI---HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
             Y GK  D    H  G D+++ H     A         K +N+++H G++ + G KMSK
Sbjct: 283 DDYWGKESDAELYHFIGKDIVYFHSLFWPAMLE-GSGFRKPSNVFVH-GYVTVNGAKMSK 340

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ- 339
           S G FI     L              +R       Y   +     R+ + ++ L  + Q 
Sbjct: 341 SRGTFIQARTYLN-------HLDPDCLRYY-----YAAKL---SDRIDDIDLNLEDFVQR 385

Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                        S + G I       L + L   +  Q     A E  K ++      A
Sbjct: 386 VNADIVNKVVNLASRNAGFITKRFDGQLSDTLADPALYQTFVDAAAEIAKAYEARESGKA 445

Query: 388 SAHILGI-EVCKEHLNKNISIAIEK 411
              I+ + ++   ++++     + K
Sbjct: 446 IREIMALADLANRYVDEQAPWVVAK 470


>gi|319937416|ref|ZP_08011823.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807782|gb|EFW04375.1| valyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 876

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K  P D   WK+   +   W S   W     GW    S M   Y     D    G D+I
Sbjct: 427 GKTAPEDIDNWKQDEDVLDTWFSSALWPFSTMGWPNTESEMFKRYF--PTDTLVTGYDII 484

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS          ++ IH    + +GRKMSKS GN +   ++++        
Sbjct: 485 FFWVSRMIFQSLEFTHERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDVID-------E 537

Query: 302 WPAPVIRLAM 311
           + A  +R  +
Sbjct: 538 YGADTLRFFL 547


>gi|300113162|ref|YP_003759737.1| leucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
 gi|299539099|gb|ADJ27416.1| leucyl-tRNA synthetase [Nitrosococcus watsonii C-113]
          Length = 819

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 64/163 (39%), Gaps = 22/163 (13%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +    L+E        + A   RL ++      + ++++ 
Sbjct: 565 LTQGMVLKDGAKMSKSKGNTVDPQALIE-------HYGADTARLFIMFTAPPEQSLEWSE 617

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-NDLNTVSAI--QALHKLARESTKN--- 378
             +  A   L +  +T     +    V+  L  N LNT   +    +H+   +++ +   
Sbjct: 618 SGVEGAHRFLKRLWRTVAVHVVEVSGVVPVLKVNSLNTEQRLVRTKVHETITKASDDIGR 677

Query: 379 --------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
                     ++ + NA A   G+    + + +    A+  L+
Sbjct: 678 RYTFNTAIAAVMELMNALAKFEGLSPQGQAVRQEALEAVVLLL 720


>gi|20808023|ref|NP_623194.1| isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|81481385|sp|Q8R9L3|SYI_THETN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|20516600|gb|AAM24798.1| Isoleucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 932

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   ++ EGRKMSKS GN +   E++       + + A V+RL +
Sbjct: 575 AVATRGKAPYKNVLTHGFVVDGEGRKMSKSLGNVVDPAEVI-------QEYGADVLRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  + + L +   +  K   T+ 
Sbjct: 628 VSADYTADMRTSPEILKQIAEVYRKIRNTAR 658


>gi|329894770|ref|ZP_08270571.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328922759|gb|EGG30092.1| Arginyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 558

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 64/420 (15%), Positives = 117/420 (27%), Gaps = 126/420 (30%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   V D L RLL+         +  N  D   +I   AR        
Sbjct: 130 PT--GPLHVGHGRGAAVGDTLSRLLQACGYRVDREFYYN--DAGAQIDHLARSVQARCEG 185

Query: 93  ND--AISIITSKNTQQFVKDTTRLA-----CLAPTHQPRATNHIPQM------------- 132
            D  +          +++ D  +         A   +  A+  I  +             
Sbjct: 186 LDPSSPEWPQDGYRGEYIVDLAKAFQDKAVIQAEDREVAASGDIGDIDAIREFAVAYLRR 245

Query: 133 ----------IYL------------------IQNIILHGHAYEANNEIIFDTSSIPNYGS 164
                     +                    ++ +  +G  YE +  +  +T +  +  +
Sbjct: 246 EQDLDLKAFGVEFDYYFLESSLYASGAVDDTVERLRDNGFTYEDDGALWLNTEAFGDDKN 305

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
              RK +           YH         W R                            
Sbjct: 306 RVMRKREGGYTYFVPDVAYHLNK------WNR---------------------------- 331

Query: 225 HYLGKVFDIHGGGLDLIFPHH---ENEIA--QSCCADRIEKTANIWIHNG-FLNLEGR-- 276
              G    I+  G D    HH       A  Q+  A   E      +H    +   G   
Sbjct: 332 ---GYDVVINEQGAD----HHSTVTRVRAGLQALKAGIPEGWPEYVLHQMVLVMRNGEEV 384

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           K+SK  G+++T+ +L++              R  ++       + F +  L  ++   + 
Sbjct: 385 KLSKRAGSYVTLRDLVDEVGR-------DATRYFLVARAPSSQLTFDID-LALSQSNENP 436

Query: 337 WPQTSTSKGIIDPAVLSALYNDL-NTVS------AIQALHK-----LARESTKNHDLLPI 384
                 +   I      ++ N L NT S      A+ AL +     L +E  K  +++  
Sbjct: 437 VYYIQYAHARIC-----SMLNKLANTPSASVSDAALAALSEPQEEALIKELDKFPEVVKQ 491


>gi|237742263|ref|ZP_04572744.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229429911|gb|EEO40123.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 636

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 72/436 (16%), Positives = 131/436 (30%), Gaps = 114/436 (26%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T +D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMGMDTHF-----MTGLDEH---GQKVEQAAEQNGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIIL--HGHAYE 147
                T K T  F      L         R T       + +++ ++        G  YE
Sbjct: 66  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEDRHKKAVKRILDMVNAKGDIYKGE-YE 123

Query: 148 ANNEIIFDT----------SSIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFI 192
               I  +T          +  P+ G   R   +E              K+ +++P DFI
Sbjct: 124 GKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHP-DFI 182

Query: 193 LWKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYL 227
           L          +            + +  G P      HI            ++      
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEND 242

Query: 228 GKVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRK 277
            K FD        +H  G D+I  H         C       K  +  + +G+   EG K
Sbjct: 243 DKKFDKFWNNARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL--------- 327
           MSKS GN +   + +       + +     R  +L   ++    D++ + +         
Sbjct: 299 MSKSRGNVVNPYDEI-------KKYGVDAFRYYLLREANFGTDGDYSTKSIIGRLNSDLA 351

Query: 328 TEAEILLSK------------WPQTSTSKGIIDPAVLSALYND-----------LNTVSA 364
            +   LL++               +STS+ I D   +  +++D                A
Sbjct: 352 NDLGNLLNRTLGMYKKYFNSVIVASSTSEPIDDE--IKTMFDDIIKDVEKYMYLFEFSRA 409

Query: 365 IQALHKLARESTKNHD 380
           ++ + K      K  D
Sbjct: 410 LETIWKFISRLNKYID 425


>gi|326677918|ref|XP_698279.5| PREDICTED: leucyl-tRNA synthetase, cytoplasmic, partial [Danio
           rerio]
          Length = 820

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 52/161 (32%), Gaps = 49/161 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     +   K       NG L L   KMSKS 
Sbjct: 309 FWYPVDVRVSGKDLVPNHLSYYLYNHVAMW--PNDSGKWPQAVRANGHLLLNSEKMSKST 366

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+++ +         + A  +RL                 L +A   +        
Sbjct: 367 GNFLTLSQAIA-------KFSADGMRL----------------ALADAGDTVE------- 396

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHD 380
                D   + A+ +     + I  L    +  +E   N D
Sbjct: 397 -----DANFVEAMAD-----AGILRLFTWVEWVKEMIANQD 427


>gi|163760146|ref|ZP_02167229.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
 gi|162282545|gb|EDQ32833.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
          Length = 514

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 13/136 (9%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           R Y+  P  Y     HIG+A   I  DVL R  R    +    +  + TD         +
Sbjct: 5   RFYITTPIFYPNGVPHIGHAYTAIATDVLARFQRLDGKD---VFFLSGTD-----EHGQK 56

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILH 142
            +  +         +  KN+  F     RL C       R T   H   +  L + +  +
Sbjct: 57  MQQTAEQEGIKPIALADKNSAVFRDMLERLDCSNDDF-IRTTEERHKASVQELWKRMEAN 115

Query: 143 GHAYEANNEIIFDTSS 158
           G  Y       +    
Sbjct: 116 GDIYLGKYGGWYSVRQ 131



 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D++  H     A    A  +E  A ++ H GFL ++G KMSKS GN +    L+
Sbjct: 257 IHMIGKDIVRFHAVYWPAFLMSA-GLELPAKVFAH-GFLLVKGEKMSKSIGNVVDPFALI 314

Query: 293 ETKKFGGRSWPAPVIRLAML 312
           +        +    +R   +
Sbjct: 315 D-------HYGLDQVRYFFM 327


>gi|302306275|ref|NP_982454.2| AAL088Wp [Ashbya gossypii ATCC 10895]
 gi|299788442|gb|AAS50278.2| AAL088Wp [Ashbya gossypii ATCC 10895]
          Length = 1104

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 19/160 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 696 PLDVSISGKDLIPNHLTFFIYNHVALFPKKFWPRGIRANGHLMLNNAKMSKSTGNFMTLK 755

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE--AEILLSKWPQTSTSKGII 347
           +++E        + A   R+A+      + ++     L E  A   + +          I
Sbjct: 756 QIVE-------KFGADASRIALADAG--DSME--DANLDEANANAAILRLFNFKEWAQEI 804

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
              V     + L T   +     LA E+  N  +   +  
Sbjct: 805 VQEV-----DSLRT-GELTDFFDLAFENEMNALIEETYKQ 838


>gi|291543960|emb|CBL17069.1| Isoleucyl-tRNA synthetase [Ruminococcus sp. 18P13]
          Length = 929

 Score = 47.9 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 16/141 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ +G+ M KS GN I  +E+ +        + A ++RL +
Sbjct: 579 SVVYKGCAPYKNVCTHGWVVDGQGKTMHKSLGNGIDPSEITD-------KYGADILRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVS-- 363
             + Y   I  + + L +      K   T+       S G        ++ +D  T    
Sbjct: 632 ASSDYHSDIRISKEILGQLSDAYKKIRNTARFILGNLSNGKGFNPDADSVSDDQLTELDR 691

Query: 364 -AIQALHKLARESTKNHDLLP 383
            A+  L +L  ++   +D   
Sbjct: 692 WALMRLDQLIDKANAGYDAFD 712


>gi|195126433|ref|XP_002007675.1| GI13074 [Drosophila mojavensis]
 gi|193919284|gb|EDW18151.1| GI13074 [Drosophila mojavensis]
          Length = 943

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +++H   ++ +G KMSKS GN I+  ++        + +   V+R  +
Sbjct: 606 SIAARNCAPYRALFVHGFTVDEKGHKMSKSLGNVISPKQI-------TKKYGTDVLRWWV 658

Query: 312 LMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
                 H    I  + + + +A   LSK   T
Sbjct: 659 ASHGTQHM--SITVSDKLMQQAAENLSKVRGT 688


>gi|110667531|ref|YP_657342.1| methionyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|121689847|sp|Q18JV4|SYM_HALWD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109625278|emb|CAJ51700.1| methionine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 741

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 49/148 (33%), Gaps = 13/148 (8%)

Query: 10  TLERKITEFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           T  +    F   DP+ +    CG P      HIG+ R  +  D+  R L+    E    +
Sbjct: 15  TQTQTRESFPTDDPAVV---TCGLPYANGDLHIGHLRTYVGGDIFSRALKRLGQE--TAF 69

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QPRATN 127
           V         +   A +E               ++ +Q+     +       +       
Sbjct: 70  VSGSDMHGTPVAVNAAEE------GVTPESFALRHHEQYETTFPQFGIEFDNYGHTHDET 123

Query: 128 HIPQMIYLIQNIILHGHAYEANNEIIFD 155
           ++     +++ +I  G+ YE    + +D
Sbjct: 124 NVEMTREIVEALIQAGYVYEREIPVAYD 151


>gi|317179745|dbj|BAJ57533.1| leucyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 806

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 8/70 (11%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKW 337
             A   + + 
Sbjct: 617 EGAHRFIKRL 626



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFETLG 112


>gi|317493351|ref|ZP_07951773.1| isoleucyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918744|gb|EFV40081.1| isoleucyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 949

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 561 EFHGHTADMYLEGSDQHRGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGN 620

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            ++  +++             ++RL +  T Y   I  + + L  +     +   T+ 
Sbjct: 621 TVSPQDVMNKLG-------GDILRLWVASTDYTGEIAVSDEILKRSADSYRRIRNTAR 671


>gi|170078301|ref|YP_001734939.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|238692812|sp|B1XP90|SYL_SYNP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169885970|gb|ACA99683.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 852

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 46/174 (26%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
                   + Y      Y     H+G+ R  ++ DV+ R  R       V +        
Sbjct: 26  TPSQSDKPKFYALSMFPYPSGKLHMGHVRNYVITDVIARYKRMQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   +L  L+           P      
Sbjct: 84  LPAENAA------IDRGIPPAKWTYQNIAQMREQLKQLG-LSIDWDREVATCSPDYYKWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R      KK
Sbjct: 137 QWLFLQFYKAGLAYQKEAAVNWDPIDQT---VLANEQVDAEGRSWRSGAIVEKK 187


>gi|146296824|ref|YP_001180595.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166230621|sp|A4XKG9|SYL_CALS8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145410400|gb|ABP67404.1| leucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 817

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 55/142 (38%), Gaps = 19/142 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYISFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++  E++E        + A   RL +L        ++++ Q +      L++ W    
Sbjct: 585 NIVSPEEIVE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 342 TSKGIIDPAVL---SALYNDLN 360
             K  +  + L   S L ++LN
Sbjct: 638 ELKDKLSDSSLPGQSELDDELN 659



 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 30/113 (26%), Gaps = 13/113 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV  R +R       V +              A +           S  
Sbjct: 47  HMGHVRNYSIGDVFARFMRLKGYN--VLHPMGWDAFGLPAENAAIKHGIH------PSDW 98

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
           T  N +   +    L       +  AT H P      Q         G AY  
Sbjct: 99  TWSNIENMKRQLKELGISYDWDREVATCH-PDYYKWTQWMFLQFYKAGLAYRK 150


>gi|317046855|ref|YP_004114503.1| isoleucyl-tRNA synthetase [Pantoea sp. At-9b]
 gi|316948472|gb|ADU67947.1| isoleucyl-tRNA synthetase [Pantoea sp. At-9b]
          Length = 939

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 51/143 (35%), Gaps = 23/143 (16%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN +   ++++          A ++RL 
Sbjct: 577 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMDKLG-------ADILRLW 629

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSA 364
           +  T Y   +  + + L  +     +   T+          L A  N  N      +   
Sbjct: 630 VASTDYSGEMAVSDEILKRSADAYRRIRNTAR--------FLLANLNGFNPATDKVSPEE 681

Query: 365 IQALHKLA--RESTKNHDLLPIF 385
           +  L + A  R     +D++  +
Sbjct: 682 MVVLDRWAVGRALDAQNDIVASY 704


>gi|258591914|emb|CBE68219.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [NC10
           bacterium 'Dutch sediment']
          Length = 646

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I+ D + R  +   G + V ++    +  DKI++ A Q        +
Sbjct: 15  VNATPHLGHAYTTILADTMARFKKLRLGPEQVYFLTGTDEHGDKIVQAAAQ------GGE 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--N 150
           +      + +  F +   RL  LAP    R T+  H   +   +Q I   G  Y      
Sbjct: 69  SPQAYADRISGIFQETWKRLG-LAPNQFIRTTSEPHKRAVQRFLQQIYDAGDIYFGEYGG 127

Query: 151 EIIFDTSSI 159
              F     
Sbjct: 128 HYCFGCERF 136


>gi|167627979|ref|YP_001678479.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|189030251|sp|B0U0E8|SYL_FRAP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167597980|gb|ABZ87978.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 813

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMT 314
              E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M   
Sbjct: 555 TSDEPFKNL-LTQGMVLKDGAKMSKSKGNTVDPQELID-------KYGADTVRLFSMFAA 606

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
              + ++++   +  A   L K    + +   I
Sbjct: 607 PPEQSLEWSDTGVDGANKFLRKVYNYAYTNKEI 639



 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 45/152 (29%), Gaps = 20/152 (13%)

Query: 13  RKITEFQAI-DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           R+   F+A+ D +  + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RENNSFKAVEDKNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L         R     
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQLDSLGFSFD--WSREVATC 127

Query: 130 P------QMIYLIQNIILHGHAYEANNEIIFD 155
                  +  + IQ +   G AY  N+ + +D
Sbjct: 128 DESYYKWEQWFFIQ-LYKKGLAYRKNSVVNWD 158


>gi|228922648|ref|ZP_04085948.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228837077|gb|EEM82418.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 921

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 19/141 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN---TVSAIQAL 368
               Y+  +  +   L +   +  K   T           L    +D N      A+  L
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFNPSENAVAVAEL 672

Query: 369 HKLAR-ESTKNHDLLPIFNAS 388
            ++ R    K +DL+     +
Sbjct: 673 REVDRYMLVKLNDLITKVKEA 693


>gi|148273554|ref|YP_001223115.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
           michiganensis NCPPB 382]
 gi|147831484|emb|CAN02445.1| metS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
          Length = 525

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 43/124 (34%), Gaps = 10/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +   T+    TD   + I R    H + P   
Sbjct: 16  VNDVPHIGHAYTEVAADVLARWHRQRGDD---TWFLTGTDEHGQKILRTATAHDTTPQAW 72

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++T    Q  ++              R T+  H   +   +Q +   G  Y    + 
Sbjct: 73  ADRLVTESW-QPLLEAVDISN----DDFIRTTDARHEESVKIFLQRLHDAGFIYTGEYKG 127

Query: 153 IFDT 156
            +  
Sbjct: 128 YYCV 131


>gi|15643843|ref|NP_228891.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6094407|sp|O33925|SYM_THEMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4981630|gb|AAD36162.1|AE001768_11 methionyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|2645225|gb|AAB87143.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 629

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D++ R  R+   +  V ++    +   K+++ A+Q        +
Sbjct: 12  VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFFLTGTDEHGQKVLQAAQQAGKDPQ--E 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  K  + + +    L      +  R T+  H+  +   +  +  +G  Y+   + 
Sbjct: 68  FCDELAEKFKRLWKE----LKITN-DYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYKG 122

Query: 153 IFDT 156
            +  
Sbjct: 123 WYCV 126



 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            ++ H G+L + G+K+SKS GN I         +F  + +   V+R  ++    R+ +  
Sbjct: 284 KVFAH-GWLTVNGQKISKSLGNAI-------DPRFFVKRYGNDVVRYYLI----RDIMFG 331

Query: 321 ---DFTVQRL 327
              DF+ +RL
Sbjct: 332 KDGDFSEERL 341


>gi|258567956|ref|XP_002584722.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237906168|gb|EEP80569.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 1103

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 23/68 (33%), Positives = 31/68 (45%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS+GNF+T+ 
Sbjct: 716 PLDVRVSGKDLIQNHLTFWLYVHIALFPEEYWPRSVRANGHLLLNGDKMSKSSGNFLTLR 775

Query: 290 ELLETKKF 297
           + +E  +F
Sbjct: 776 DAVEKCQF 783


>gi|224002048|ref|XP_002290696.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974118|gb|EED92448.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 516

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
           +++I  AI K + ER++  K + F  AD IR++L        D    D   R   W+
Sbjct: 376 SEDIQKAIGKKLAERILARKNRNFDLADDIRQELR-------DEYVVDVDDRTKTWR 425



 Score = 43.3 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
            I  L++ER+     + F +AD I+++L S G  + D 
Sbjct: 237 EIHLLIRERMECKFARDFQTADRIQEELLSHGVDVHDG 274



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 14/37 (37%)

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
           L++     I  LV ER        +  AD I  +L  
Sbjct: 309 LSEAEIEEINALVAERSECKANADYDRADAIFAELSD 345


>gi|312880384|ref|ZP_07740184.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783675|gb|EFQ24073.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 648

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 15/126 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  DVL R  R        T++    +   KI + A  +        
Sbjct: 17  VNDVPHIGHAYTTIAADVLARHHRMLG--DPTTFLTGTDEHGQKIQQAAAAKGL------ 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANN 150
               +  +  + F +    L           +PR    + Q I+    ++  G  Y  + 
Sbjct: 69  TALQLADQTVENFRRLWKVLNITNDDFIRTTEPR-HEKVVQHIF--STLLEKGDIYLGSY 125

Query: 151 EIIFDT 156
           E  +  
Sbjct: 126 EGWYCV 131



 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A  ++    ++ H G+  +EG KMSKS GN +   E+ E        +   V R  +L
Sbjct: 278 ALGLQPPKRVFAH-GWWTVEGDKMSKSKGNVVDPFEMAER-------YGVDVFRYFLL 327


>gi|167837875|ref|ZP_02464758.1| leucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 864

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 40/120 (33%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAQW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T +N     K    +  LA       T   P      Q     ++  G AY+    + +D
Sbjct: 101 TYENIAYMKKQMQSMG-LAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAYKKTGIVNWD 159


>gi|15612382|ref|NP_224035.1| isoleucyl-tRNA synthetase [Helicobacter pylori J99]
 gi|8928388|sp|Q9ZJJ1|SYI_HELPJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4155922|gb|AAD06890.1| ISOLEUCYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 920

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 68/183 (37%), Gaps = 19/183 (10%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYHGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCVLNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN ++++ LL+          + V+RL +    Y+  +  +     + E    K
Sbjct: 610 KMSKSKGNVVSLDNLLKKHG-------SDVVRLWVAFNDYQNDLRVSQTFFIQTEQHYKK 662

Query: 337 WPQT----STSKGIIDPAVLSALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +  T      +   +D   L   ++    D   + A++ +      + + HDL+   N  
Sbjct: 663 FRNTLKFLLANFSDMDLKNLERPHDFSPLDHFILEALETISAGVNSAFEEHDLVKGLNIL 722

Query: 389 AHI 391
              
Sbjct: 723 MAF 725


>gi|329897211|ref|ZP_08271951.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
 gi|328921366|gb|EGG28760.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC3088]
          Length = 810

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 34/146 (23%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMT 314
           +  E    + +  G +  +G KMSKS GN +    L++       S+ A  +RL  M   
Sbjct: 553 NSDEPFKRL-LTQGMVLKDGAKMSKSKGNTVDPQALID-------SYGADTVRLFSMFAA 604

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID---------------PAVLSALYN 357
              + ++++   +  A   L +  + +     G  D                  ++ + +
Sbjct: 605 PPEQSLEWSDAGVDGAHRFLKRLWRMAFEHIDGTADTPEKPLTAKDVRRKLHETIAKVTD 664

Query: 358 D------LNTVSAIQALHKLARESTK 377
           D       NT  AI A+ +L  E  +
Sbjct: 665 DYGRRQTFNT--AIAAVMELCNELVR 688



 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 38/137 (27%), Gaps = 15/137 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP   + Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 27  DPKREKFYCLAMFPYPSGKLHMGHVRNYTIADVIARFQRMLG--KNVLQPMGWDAFGLPA 84

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      I  N   +  T+ N         RL   A       T   P      Q  
Sbjct: 85  ENAA------IKNNVPPAAWTADNINYMRDQLKRLGF-AYDWTREVTTCEPDYYRWEQWF 137

Query: 138 --NIILHGHAYEANNEI 152
              +   G AY+   E+
Sbjct: 138 FTRLFEKGLAYKKQAEV 154


>gi|147918827|ref|YP_687447.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121690214|sp|Q0W0H2|SYM_UNCMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110622843|emb|CAJ38121.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 683

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 46/142 (32%), Gaps = 27/142 (19%)

Query: 17  EFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           EF    P  +    CG P     AHIG+ R  I  D+  R LR    E    +V      
Sbjct: 9   EFPCDKPVLV---TCGLPYANGSAHIGHLRTYIPADMFVRTLRMMGQE--TVFVCGSDAH 63

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL--------APTHQPRATN 127
              II  A ++        +   +  K   QF     +   +         PT+  R T 
Sbjct: 64  GTPIIVNAEEQK------ISPRQLVDKYHVQFDSIFKKCGVIFDRYGNTDDPTNHAR-TK 116

Query: 128 HIPQMIYLIQNIILHGHAYEAN 149
            I      +  +  +G+ Y   
Sbjct: 117 SI------VSELQKNGYVYPKE 132



 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+I+ H     A    A          + +G + +  +K SKS G  + + +  
Sbjct: 293 IHFIGGDIIYHHCIFWPAMLKGAGYTLPWGV--VASGMIKVNDKKFSKSRGYIVWVED-- 348

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTV 324
               +    +   ++R  +L  T + + I+F+ 
Sbjct: 349 ---DYLAHGFHPDLLRYYILSYTSHTKDINFSW 378


>gi|317123001|ref|YP_004103004.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
 gi|315592981|gb|ADU52277.1| leucyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
          Length = 897

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 15/121 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    + +  G +  +G KMSKS G
Sbjct: 531 PVDQYIGGIEHAVLHLLYSRFITKVLYDEGLVPSPEPFRRL-LTQGMVIKDGAKMSKSKG 589

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  ++LE        + A   RL +L        ++++   +  A   + +  +  T
Sbjct: 590 NVVSPEDILE-------EYGADATRLFILFAAPPERDLEWSEHGIEGASRFVQRVWRLVT 642

Query: 343 S 343
            
Sbjct: 643 G 643



 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 25/96 (26%), Gaps = 10/96 (10%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DPS  + Y     P      H+G+ R   + D   R LR       V Y           
Sbjct: 31  DPSRPKFYCLEMYPYPSGKLHMGHVRNYSIGDATARFLRMRGYN--VLYPMGWDSFGLPA 88

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              A             +  T  N     +   RL 
Sbjct: 89  ENAAIANQTH------PAEWTYANIAAMREQMQRLG 118


>gi|291616222|ref|YP_003518964.1| IleS [Pantoea ananatis LMG 20103]
 gi|291151252|gb|ADD75836.1| IleS [Pantoea ananatis LMG 20103]
 gi|327392673|dbj|BAK10095.1| isoleucyl-tRNA synthetase IleS [Pantoea ananatis AJ13355]
          Length = 939

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN +   ++++          A ++RL 
Sbjct: 577 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMDKLG-------ADILRLW 629

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  +     +   T+ 
Sbjct: 630 VASTDYSGEMAVSDEILKRSADAYRRIRNTAR 661


>gi|254429394|ref|ZP_05043101.1| leucyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195563|gb|EDX90522.1| leucyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 834

 Score = 47.9 bits (113), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 37/137 (27%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN +   +++E        + A  +RL M+      + +++    +
Sbjct: 585 GMVLKDGAKMSKSKGNTVDPQQMIE-------EYGADTVRLFMMFAAPPEQSLEWNDAGV 637

Query: 328 TEAEILLSKWPQTSTSKGIIDPA---VLSALYN-----------------D-------LN 360
             A   + +  +          A    ++AL +                 D        N
Sbjct: 638 EGAFRFIKRLWRLVAEHVEAGNAGTLDVNALDDAGKTLRRKTHETIQKVSDDYGRRSTFN 697

Query: 361 TVSAIQALHKLARESTK 377
           T  AI A+ +L  E +K
Sbjct: 698 T--AIAAVMELINEVSK 712


>gi|238764641|ref|ZP_04625586.1| Isoleucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238697133|gb|EEP89905.1| Isoleucyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 944

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 22/164 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 582 IATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 634

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           +  T Y   I  + + L  +     +   T+          L A  N  +      ALH+
Sbjct: 635 VASTDYTGEIAVSDEILKRSADSYRRIRNTAR--------FLLANLNGFD-----PALHQ 681

Query: 371 LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
           +A E     D   +  A A     E+ + + N +  + +++L+Q
Sbjct: 682 VAPEEMVVVDRWAVGRAQAA--QAEIMEAYDNYDFHLVVQRLMQ 723


>gi|310778457|ref|YP_003966790.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
 gi|309747780|gb|ADO82442.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
          Length = 637

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 60/352 (17%), Positives = 105/352 (29%), Gaps = 78/352 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T  D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVIARYKKTMGYDVFF-----LTGTDEH---GQKVEETAREKGF 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K   +F +D   L  ++     R T   H   +  +++ +   G  Y+   E 
Sbjct: 66  TPQEWTDKMAPRF-EDMWNLLNVSHDDFIRTTQIRHKKAVTKILKKVYEKGDIYKGEYEG 124

Query: 153 IFDTSS--------------IPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFIL 193
            +  S                P+ G   R   +E              ++ +K+P DFIL
Sbjct: 125 KYCVSCETYVPENQIVGENGCPDCGKDLRVVKEESYFFKMSKYQDALLEHIEKHP-DFIL 183

Query: 194 WKRSTPMEPGW-------------ESPWGRGR---PG-----WHIECSA----------- 221
                     +                WG      PG     W    +            
Sbjct: 184 PHSRKNEVISFVKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENNL 243

Query: 222 -MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
            M   +      +H  G D++  H         C      EK  +  + +G+  +EG KM
Sbjct: 244 DMFQKFWNDGEVVHLLGKDILRFH----AIIWPCMLLAAEEKLPDKIVAHGWWTVEGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           SKS GN I         +     +     R  ++   H+    D++   +  
Sbjct: 300 SKSKGNVI-------DPQAETERYGRDPFRYFLMREVHFGNDGDYSTTSMVN 344


>gi|205356336|ref|ZP_03223101.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205345721|gb|EDZ32359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 628

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 122 HYCISCESF 130



 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   EG KMSKS GN +   E+++       ++ +   R  +L    +    DF+   
Sbjct: 285 HGWWTKEGEKMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENM 337

Query: 327 L 327
           L
Sbjct: 338 L 338


>gi|190570583|ref|YP_001974941.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190356855|emb|CAQ54226.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 509

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV  R ++     K V +     +   KI + A+ +        
Sbjct: 16  VNDKPHIGHAYTSLICDVAARFMKLAG--KNVKFTTGTDEHGQKIEKAAKTKGIEPKEFT 73

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +T +   +       L         R T   H   +I L   +   G  Y  +   
Sbjct: 74  DEISVTFRKLAE-------LMNFDYDDFIRTTEERHEKAVIALWNRLEERGQIYLDSYSG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAFY 136


>gi|34764087|ref|ZP_00144966.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
 gi|27886141|gb|EAA23438.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
           [Fusobacterium nucleatum subsp. vincentii ATCC 49256]
          Length = 636

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 72/436 (16%), Positives = 131/436 (30%), Gaps = 114/436 (26%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T +D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMGMDTHF-----MTGLDEH---GQKVEQAAEQNGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIIL--HGHAYE 147
                T K T  F      L         R T       + +++ ++        G  YE
Sbjct: 66  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEDRHKKAVKRILDMVNAKGDIYKGE-YE 123

Query: 148 ANNEIIFDT----------SSIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFI 192
               I  +T          +  P+ G   R   +E              K+ +++P DFI
Sbjct: 124 GKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHP-DFI 182

Query: 193 LWKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYL 227
           L          +            + +  G P      HI            ++      
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEND 242

Query: 228 GKVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRK 277
            K FD        +H  G D+I  H         C       K  +  + +G+   EG K
Sbjct: 243 DKKFDKFWNNARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL--------- 327
           MSKS GN +   + +       + +     R  +L   ++    D++ + +         
Sbjct: 299 MSKSRGNVVNPYDEI-------KKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLA 351

Query: 328 TEAEILLSK------------WPQTSTSKGIIDPAVLSALYND-----------LNTVSA 364
            +   LL++               +STS+ I D   +  +++D                A
Sbjct: 352 NDLGNLLNRTLGMYKKYFNGVIVASSTSEPIDDE--IKTMFDDIIKDVEKYMYLFEFSRA 409

Query: 365 IQALHKLARESTKNHD 380
           ++ + K      K  D
Sbjct: 410 LETIWKFISRLNKYID 425


>gi|220913018|ref|YP_002488327.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
 gi|219859896|gb|ACL40238.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
          Length = 519

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     V  +T  D+  ++ A+    +         
Sbjct: 22  PHIGHAYEYIATDAMARFKRLDGYD-----VMFLTGTDEHGMKIAQ---TAEKEGITPKE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N + +      L         R T  +H      + + +  +G  Y    E  +  
Sbjct: 74  LVDRNAEIYKAAHEALGITY-DRFIRTTDEDHYAASQAIWKKMEANGDIYLDKYEGWYSV 132

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 133 RDEAFYGE 140



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 57/180 (31%), Gaps = 34/180 (18%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    + IH GFL+  G KMSKS GN +   + 
Sbjct: 262 DVHVIGKDISRFHAIYWPAFLLSA-GLELPKRVMIH-GFLHNNGVKMSKSLGNVVAPADF 319

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THY---------REPIDFTVQRLTEAEILLS 335
           +E        +    +R   L          Y            +      L  A+  LS
Sbjct: 320 VE-------QYGLDQVRFFFLREVPFGADGSYNHEAIVGRMNSDLANNFGNL--AQRSLS 370

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--LHKLARESTKNHDLLPIFNASAHILG 393
              +          A   A     +T    QA  L   AR +    +      A   +LG
Sbjct: 371 MVAKNCGGAVPTPGAFTDA-----DTAILEQAGGLLDNARAAFDKQEFSRALEAIWAVLG 425


>gi|67906490|gb|AAY82597.1| predicted leucyl-tRNA synthetase LeuS [uncultured bacterium
           MedeBAC35C06]
          Length = 804

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 37/178 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 D  E    + +  G +  +G KMSKS G
Sbjct: 511 PVDLYIGGIEHAILHLLYSRFFHKALRDLGLVDGDEPFKKL-LTQGMVLKDGAKMSKSKG 569

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +     ++        + A  IRL M+      + ++++ + +  A   L +      
Sbjct: 570 NTVDPQSFID-------KYGADTIRLYMMFTAPPEQSLEWSDKSVEGASRFLKRLWNLCD 622

Query: 343 S---KGIIDPA---------------VLSALYNDLNTV----SAIQALHKLARESTKN 378
               + I +P                 +  + +D  T     +AI ++ +L     K+
Sbjct: 623 GLKYEDIPEPKNFSQEEKELRNKTHLTIKKVTDDFETRYAFNTAIASIMELLNSIPKS 680


>gi|321456139|gb|EFX67254.1| hypothetical protein DAPPUDRAFT_189542 [Daphnia pulex]
          Length = 965

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 43/116 (37%), Gaps = 17/116 (14%)

Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
                W S   +G+          +  YL +  D  GG         ++ +  S  +   
Sbjct: 558 DSGVSWNSVLPQGK---------QADFYL-EGIDQFGGWF-------QSSLLTSVASSGH 600

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
               NI++H   L+ EGRKMSKS GN I  + +L+       +     +R  +   
Sbjct: 601 APYKNIFVHGFVLDHEGRKMSKSLGNVIDPHLILDGDGKKQPAVGIDALRWWVASH 656


>gi|148239596|ref|YP_001224983.1| leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|189083176|sp|A5GL71|SYL_SYNPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147848135|emb|CAK23686.1| Leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 878

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 53/179 (29%), Gaps = 20/179 (11%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +P     Y      Y     H+G+ R  ++ DV+ R  R       V +           
Sbjct: 45  EPGQNAFYALSMFPYPSGSLHMGHVRNYVITDVIARAQRMRG--DSVLHPMGWDAFGLPA 102

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      I       + T +N +Q      RL       + +AT H        Q  
Sbjct: 103 ENAA------IERQVDPGVWTDRNIEQMKAQLARLGLSIDWSREQATCH-ADYYRWTQWL 155

Query: 138 --NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              ++  G AY+ +  +              +  ++D +    R      +KN   + L
Sbjct: 156 FLELMDQGLAYQKDATVNWDPVDQT----VLANEQVDSEGRSWRSGALVEQKNLRQWFL 210


>gi|134095829|ref|YP_001100904.1| leucyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166231614|sp|A4G8E6|SYL_HERAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|133739732|emb|CAL62783.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Herminiimonas arsenicoxydans]
          Length = 881

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 43/133 (32%), Gaps = 15/133 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           Y C    Y     H+G+ R   + DV+YR LR       +          D     A  E
Sbjct: 42  YACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--E 93

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILH 142
           + ++  N   +  T  N +        +  LA       T   P+     Q     ++  
Sbjct: 94  NAAMANNVPPAQWTYANIEHMKTQMASMG-LAIDWSREMTACKPEYYKWNQWMFLKMLEK 152

Query: 143 GHAYEANNEIIFD 155
           G  Y+    + +D
Sbjct: 153 GIIYKKTGSVNWD 165


>gi|294785169|ref|ZP_06750457.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486883|gb|EFG34245.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 636

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 72/436 (16%), Positives = 131/436 (30%), Gaps = 114/436 (26%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T +D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMGMDTHF-----MTGLDEH---GQKVEQAAEQNGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIIL--HGHAYE 147
                T K T  F      L         R T       + +++ ++        G  YE
Sbjct: 66  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEDRHKKAVKRILDMVNAKGDIYKGE-YE 123

Query: 148 ANNEIIFDT----------SSIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFI 192
               I  +T          +  P+ G   R   +E              K+ +++P DFI
Sbjct: 124 GKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHP-DFI 182

Query: 193 LWKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYL 227
           L          +            + +  G P      HI            ++      
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEND 242

Query: 228 GKVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRK 277
            K FD        +H  G D+I  H         C       K  +  + +G+   EG K
Sbjct: 243 DKKFDKFWNNARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL--------- 327
           MSKS GN +   + +       + +     R  +L   ++    D++ + +         
Sbjct: 299 MSKSRGNVVNPYDEI-------KKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLA 351

Query: 328 TEAEILLSK------------WPQTSTSKGIIDPAVLSALYND-----------LNTVSA 364
            +   LL++               +STS+ I D   +  +++D                A
Sbjct: 352 NDLGNLLNRTLGMYKKYFNGVIVASSTSEPIDDE--IKTMFDDIIKDVEKYMYLFEFSRA 409

Query: 365 IQALHKLARESTKNHD 380
           ++ + K      K  D
Sbjct: 410 LETIWKFISRLNKYID 425


>gi|297526914|ref|YP_003668938.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255830|gb|ADI32039.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 500

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 38/132 (28%), Gaps = 13/132 (9%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             HIG+A   +  DV+ R  R    E           I        + +  +        
Sbjct: 17  PPHIGHAYTTVFADVMARYHRLVGDEVFF--------ITGNDEHGLKLQRVAEKKGIHPK 68

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--NEII 153
               +    + K    L      +  R T+  H   +   IQ +   G  Y+A+      
Sbjct: 69  QFVDEMADVYRKYWGMLDISY-DYFIRTTDEYHEKTVKTAIQKLYDKGLIYKASYAGWYC 127

Query: 154 FDTSSIPNYGSF 165
            D     + G +
Sbjct: 128 VDCEKFYSPGEY 139


>gi|32265964|ref|NP_859996.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|48428532|sp|Q7VIY7|SYL_HELHP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|32262013|gb|AAP77062.1| leucyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 830

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  AN+ +  G +  +G KMSKS GN +  NEL+         + A   RL +L      
Sbjct: 579 EPFANL-LTQGMVLKDGAKMSKSKGNIVNPNELIA-------HYGADTARLFVLFAAPPT 630

Query: 318 EPIDFTVQRLTEAEILLSKWPQTST 342
             +++  + +  A   L +  + + 
Sbjct: 631 RELEWNDKAVEGAHRFLKRLWERAE 655


>gi|332289398|ref|YP_004420250.1| isoleucyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432294|gb|AEC17353.1| isoleucyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 939

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN +T  E+++        +   ++RL +
Sbjct: 581 STATDNKAPYKQVLTHGFTVDGQGRKMSKSIGNIVTPQEVMD-------KFGGDILRLWV 633

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             + Y   I  + +    A     +   T+ 
Sbjct: 634 ASSDYTGEIAVSDEIFKRAADTYRRIRNTAR 664


>gi|304437277|ref|ZP_07397237.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304369769|gb|EFM23434.1| leucine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 823

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++  E+++        + A   RL +L      
Sbjct: 565 EPFTNL-LTQGMVIKDGAKMSKSLGNVVSPEEIIDR-------YGADTARLFILFAAPVD 616

Query: 318 EPIDFTVQRLTEAEILLSK 336
             +D++ Q +  A   L +
Sbjct: 617 RDLDWSDQGVEGAYRFLGR 635


>gi|221633223|ref|YP_002522448.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
 gi|221155678|gb|ACM04805.1| leucyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
          Length = 829

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 62/177 (35%), Gaps = 33/177 (18%)

Query: 230 VFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H          +A     +  E    ++ H   L  +G KMSKS G
Sbjct: 537 PVDQYTGGIEHAILHLLYSRFWTKALADLGLVNHREPFLRLFNHGVILGEDGEKMSKSRG 596

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++L+           A  +RL ++ +  + +   ++ + +   +  L +     T
Sbjct: 597 NVVDPDDLVARLG-------ADTVRLYLMFIGPWSQGGPWSSRGVAGVQRFLQRVWALVT 649

Query: 343 SK-----GIIDPAVLSALY-----------NDLNTVS---AIQALHKLARESTKNHD 380
                     +     AL            +D  T S   AI  + +L  E ++  +
Sbjct: 650 ETLDVPVDTAEDEQARALRRLVHRTIKHVTDDFETFSFNTAIARMMELVNELSRLRE 706



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 33/138 (23%), Gaps = 15/138 (10%)

Query: 22  DPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + Y  V  P      HIG+       D   R  R         +           
Sbjct: 38  DPTRPKWYHLVMFPYPSGNLHIGHWFSYAPADAAARYKRMRGYNVLFPF--GFDAFGLPA 95

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A +            + T +N     K    L  +           +P+     Q  
Sbjct: 96  ENAAIKHGIH------PRVWTMQNIAHMKKQLRSLGGM-FDWSKEVITCLPEYYRWNQWF 148

Query: 138 --NIILHGHAYEANNEII 153
                  G AY A   + 
Sbjct: 149 FLQFYKRGLAYRAKAPVW 166


>gi|254283790|ref|ZP_04958758.1| leucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219679993|gb|EED36342.1| leucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 813

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 52/144 (36%), Gaps = 37/144 (25%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    + +  G +  +G KMSKS GN +    L++        + A  +RL  M      
Sbjct: 557 EPFKRL-LTQGMVLKDGAKMSKSKGNTVDPQALID-------QYGADTVRLFSMFAAPPD 608

Query: 318 EPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDPA---------------VLSALYN 357
           + ++++   +      L +        TS S   +D A                ++ + +
Sbjct: 609 QSLEWSDSGVEGGHRFLKRLWRLVSEATSRSTDTLDTADLNNGQKDLRRKTHETIAKVSD 668

Query: 358 D------LNTVSAIQALHKLARES 375
           D       NT  AI A+ +L  E 
Sbjct: 669 DYGRRQTFNT--AIAAVMELCNEI 690


>gi|188524069|ref|ZP_03004160.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|195659982|gb|EDX53362.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
          Length = 521

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DVL R  R +  +        +T +D+      + +  +   N +   
Sbjct: 20  PHIGHAYTTIIADVLARYKRLFGYDVFF-----LTGMDEH---GQKIQQKAFEENISPKA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F+    RL   + +   R T  +H   +  +   +   G  Y       +  
Sbjct: 72  LVDRNSIIFLNLWKRLHI-SFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYYCV 130

Query: 157 SSIPNY 162
           S   NY
Sbjct: 131 SCEENY 136


>gi|185178808|ref|ZP_02964601.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024305|ref|ZP_02996992.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|195867767|ref|ZP_03079768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|225551127|ref|ZP_03772073.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209436|gb|EDU06479.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188018979|gb|EDU57019.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|195660622|gb|EDX53878.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
           ATCC 33175]
 gi|225378942|gb|EEH01307.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 521

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DVL R  R +  +        +T +D+      + +  +   N +   
Sbjct: 20  PHIGHAYTTIIADVLARYKRLFGYDVFF-----LTGMDEH---GQKIQQKAFEENISPKA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F+    RL   + +   R T  +H   +  +   +   G  Y       +  
Sbjct: 72  LVDRNSIIFLNLWKRLHI-SFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYYCV 130

Query: 157 SSIPNY 162
           S   NY
Sbjct: 131 SCEENY 136


>gi|171920815|ref|ZP_02931489.2| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188518520|ref|ZP_03003990.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|198273255|ref|ZP_03205791.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554038|ref|YP_002284592.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550469|ref|ZP_03771418.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903582|gb|EDT49871.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|188997923|gb|EDU67020.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|198249775|gb|EDY74555.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541539|gb|ACI59768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379623|gb|EEH01985.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 521

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DVL R  R +  +        +T +D+      + +  +   N +   
Sbjct: 20  PHIGHAYTTIIADVLARYKRLFGYDVFF-----LTGMDEH---GQKIQQKAFEENISPKA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F+    RL   + +   R T  +H   +  +   +   G  Y       +  
Sbjct: 72  LVDRNSIIFLNLWKRLHI-SFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYYCV 130

Query: 157 SSIPNY 162
           S   NY
Sbjct: 131 SCEENY 136


>gi|119472722|ref|XP_001258405.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119406557|gb|EAW16508.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 1127

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 28/70 (40%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 716 PLDVRVSGKDLIQNHLTFFLYIHVALFPREYWPRGVRANGHLLLNGDKMSKSTGNFLTLK 775

Query: 290 ELLETKKFGG 299
           + +E      
Sbjct: 776 DAVEKFGADA 785


>gi|238022875|ref|ZP_04603301.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
 gi|237865683|gb|EEP66821.1| hypothetical protein GCWU000324_02796 [Kingella oralis ATCC 51147]
          Length = 927

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 38/108 (35%), Gaps = 15/108 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C A        +  H   ++  GRKMSKS GN +   E+          + A ++RL   
Sbjct: 579 CAAFGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAA 631

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            T Y   +  + + L        +   T         A L A  +D N
Sbjct: 632 ATDYSGDLAISKEILKRVTESYRRIRNTL--------AFLFANLSDFN 671


>gi|227358201|ref|ZP_03842542.1| isoleucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227161537|gb|EEI46574.1| isoleucyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 936

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 549 EFHGNSADLYLEGSDQHRGWFMSSLMISTAIKGKAPYREVLTHGFTVDGQGRKMSKSIGN 608

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            ++  +++           A ++RL +  T Y   I  + + L  +     +   T+   
Sbjct: 609 TVSPQDVMNKLG-------ADILRLWVASTDYTGEIAVSDEILKRSADTYRRIRNTARFF 661

Query: 342 -TSKGIIDPA 350
             +    DPA
Sbjct: 662 LANLNGFDPA 671


>gi|152980718|ref|YP_001354586.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166231615|sp|A6T239|SYL_JANMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151280795|gb|ABR89205.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 881

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 42/133 (31%), Gaps = 15/133 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           Y C    Y     H+G+ R   + DV+YR LR       +          D     A  E
Sbjct: 42  YACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--E 93

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILH 142
           + ++  N   +  T  N          +  LA       T   P+     Q     ++  
Sbjct: 94  NAAMANNVPPAQWTYANIDYMKTQMASMG-LAIDWSREMTACRPEYYKWNQWMFLKMLEK 152

Query: 143 GHAYEANNEIIFD 155
           G  Y+    + +D
Sbjct: 153 GIIYKKTGTVNWD 165


>gi|291277617|ref|YP_003517389.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964811|emb|CBG40667.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 639

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D+L +       E   T++   TD         + E  +   + 
Sbjct: 12  VNDVPHIGHAYTNILADMLKKYYTLLGEE---TFLLTGTD-----EHGQKIEQSAQKKHQ 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  + +Q+F             H  R T+  HI  +      +   G  Y  E   
Sbjct: 64  TPKAYADQISQEFRNLWDYFGIDY-DHFVRTTDASHIKGVQEAFSKMYQKGDIYKGEYEG 122

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 123 NYCISCESF 131


>gi|302552805|ref|ZP_07305147.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
 gi|302470423|gb|EFL33516.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
           40736]
          Length = 538

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 50/156 (32%), Gaps = 12/156 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     S P   
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANGVS-PQEW 79

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++T    +   +              R T   H  ++   +Q++   G  Y+   E 
Sbjct: 80  ADKLVTEAW-KPLWEHLEIAN----DDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
            +       Y       +D +            K P
Sbjct: 135 PYCVG-CEEY-KLPGELLDGEGEYAGQKLCPIHKKP 168



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 42/142 (29%), Gaps = 41/142 (28%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML--------------- 312
           NG+L + G KMSKSN   I   +L          +     R   L               
Sbjct: 304 NGWLMVGGEKMSKSNLTGIKPQDLTT-------HFGVDAYRWYFLRAIAFGQDGSFSWED 356

Query: 313 -MTHYREPIDFTVQRLTEAEILL------SKWPQTSTSKGIIDPAVLSALY--------- 356
               Y   +      L      +       + P+ ST+ G  + A+   L          
Sbjct: 357 FSARYTSELANDYGNLASRVAAMVGKYFGGELPE-STADGEAEKAIHEGLAKAVAEADRR 415

Query: 357 --NDLNTVSAIQALHKLAREST 376
             +DL+    I A+    ++  
Sbjct: 416 IGDDLDFQGGILAIFDFVKQVN 437


>gi|241668533|ref|ZP_04756111.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254877068|ref|ZP_05249778.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254843089|gb|EET21503.1| leucyl-tRNA synthetase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 813

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 9/93 (9%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMT 314
              E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M   
Sbjct: 555 TSDEPFKNL-LTQGMVLKDGAKMSKSKGNTVDPQELID-------KYGADTVRLFSMFAA 606

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
              + ++++   +  A   L K    + +   I
Sbjct: 607 PPEQSLEWSDTGVDGANKFLRKVYNYAYTNKEI 639



 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 41/140 (29%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D +  + Y      Y     H+G+ R   + DV+ R  +     K V +           
Sbjct: 28  DKNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHPMGWDAFGLPA 85

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYL 135
              A +         +    T  N          L       +  AT        +  + 
Sbjct: 86  ENAAIKHKK------SPYEWTKSNIAYMRSQLDSLGFSFDWSREVATCDEDYYKWEQWFF 139

Query: 136 IQNIILHGHAYEANNEIIFD 155
           IQ +   G AY  N+ + +D
Sbjct: 140 IQ-LYKEGLAYRKNSVVNWD 158


>gi|238927290|ref|ZP_04659050.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884877|gb|EEQ48515.1| leucine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 823

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++  E+++        + A   RL +L      
Sbjct: 565 EPFTNL-LTQGMVIKDGAKMSKSLGNVVSPEEIIDR-------YGADTARLFILFAAPVD 616

Query: 318 EPIDFTVQRLTEAEILLSK 336
             +D++ Q +  A   L +
Sbjct: 617 RDLDWSDQGVEGAYRFLGR 635


>gi|189083249|sp|Q0VN53|SYL_ALCBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 815

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 37/137 (27%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN +   +++E        + A  +RL M+      + +++    +
Sbjct: 566 GMVLKDGAKMSKSKGNTVDPQQMIE-------EYGADTVRLFMMFAAPPEQSLEWNDAGV 618

Query: 328 TEAEILLSKWPQT------STSKGIIDPAVLS----AL-----------YND------LN 360
             A   + +  +       + + G +D   L     AL            +D       N
Sbjct: 619 EGAFRFIKRLWRLVAEHVEAGNTGTLDVNALDDAGKALRRKTHETIQKVSDDYGRRNTFN 678

Query: 361 TVSAIQALHKLARESTK 377
           T  AI A+ +L  E +K
Sbjct: 679 T--AIAAVMELINEVSK 693


>gi|110834808|ref|YP_693667.1| leucine-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|110647919|emb|CAL17395.1| leucine-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 822

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 53/137 (38%), Gaps = 37/137 (27%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN +   +++E        + A  +RL M+      + +++    +
Sbjct: 573 GMVLKDGAKMSKSKGNTVDPQQMIE-------EYGADTVRLFMMFAAPPEQSLEWNDAGV 625

Query: 328 TEAEILLSKWPQT------STSKGIIDPAVLS----AL-----------YND------LN 360
             A   + +  +       + + G +D   L     AL            +D       N
Sbjct: 626 EGAFRFIKRLWRLVAEHVEAGNTGTLDVNALDDAGKALRRKTHETIQKVSDDYGRRNTFN 685

Query: 361 TVSAIQALHKLARESTK 377
           T  AI A+ +L  E +K
Sbjct: 686 T--AIAAVMELINEVSK 700


>gi|70992585|ref|XP_751141.1| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66848774|gb|EAL89103.1| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|159124712|gb|EDP49830.1| leucyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 1127

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 69/218 (31%), Gaps = 54/218 (24%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 716 PLDVRVSGKDLIQNHLTFFLYIHVALFPREYWPRGVRANGHLLLNGDKMSKSTGNFLTLK 775

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E        + A   R+A                                  GI D 
Sbjct: 776 DAVE-------KFGADASRIAF----------------------------ADAGDGIEDA 800

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                + N  +++  +  L +   E+ K+  L             +      +K     +
Sbjct: 801 NFDENVAN--SSILRLFTLKEWIEETVKDSSLRT-----------DSEYSFWDKLFDNEM 847

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
             LV+E +   K   F  A      L+S  F L + ++
Sbjct: 848 NSLVREAIKHYKNTDFKLA------LKSALFDLTNARD 879


>gi|326922099|ref|XP_003207289.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Meleagris gallopavo]
          Length = 904

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 27/186 (14%)

Query: 13  RKITEFQAI---DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           R   +F  I   D S  + YV     Y     H+G+ R   + D + R  +         
Sbjct: 66  RIKEQFCRISETDKSRPKFYVLSMFPYPSGKLHMGHVRVYTISDAVARYQKMRG-----M 120

Query: 68  YVRNITDID--DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            V N    D      E A  EH   P        T  N Q   +    L  L+ T +   
Sbjct: 121 QVLNPMGWDAFGLPAENAAIEHGLHPA-----SWTQSNIQHMREQFDALG-LSFTWEREV 174

Query: 126 TNHIPQMIYLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           T  +P+     Q     +   G  Y+    +              +  ++D+     R  
Sbjct: 175 TTCLPEYYKWTQYLFLKLFESGIVYQKEALVNWDPVDQT----VLANEQVDDNGCSWRSG 230

Query: 181 EKYHKK 186
            K  +K
Sbjct: 231 AKVEQK 236


>gi|317181247|dbj|BAJ59033.1| leucyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 806

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 8/76 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  +G KMSKS GN ++  E+L       + + A   RL +L      + +++    L
Sbjct: 564 GMVLKDGAKMSKSKGNVVSPKEIL-------KKYGADAARLFILFAAPPAKELEWNDNAL 616

Query: 328 TEAEILLSKWPQTSTS 343
                 + +    +++
Sbjct: 617 EGTHRFIKRLYDKASA 632



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|313217418|emb|CBY38518.1| unnamed protein product [Oikopleura dioica]
          Length = 568

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 45/202 (22%), Positives = 73/202 (36%), Gaps = 26/202 (12%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D+   H     A    A+       +++H G    +G KMSKS  NF+T  ELLE   
Sbjct: 306 GIDIARFHCIFWPAMLLAAELPLP-KKVFVH-GHWTRDGMKMSKSLDNFVTPKELLELVG 363

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRL-----TEAEILLSKWPQTSTSKGIIDPAV 351
                  +  +R   L     + +DF  + L      +    ++     +TSK +     
Sbjct: 364 N-----QSDAVRWFCLKHATLKNVDFQDELLRIQSDADLANKIANLLSRTTSKNLNPSGA 418

Query: 352 LSALYND--LNTVSAIQALHKLARESTKNHDLLPIF-------NASAHILGIEVCKEHLN 402
              L+ D  LN     + L +  +E     +L   F       NA   +  I   +E L 
Sbjct: 419 YPTLFPDSLLNAPDGEKYLIETVQEL---PELYASFVNAGQLPNAMNCV--IRAIEEGLQ 473

Query: 403 KNISIAIEKLVQERLILLKMKK 424
              +  I KL ++       K 
Sbjct: 474 FMTNEKIFKLDRDIKSERMKKD 495


>gi|256845534|ref|ZP_05550992.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719093|gb|EEU32648.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 636

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 69/434 (15%), Positives = 123/434 (28%), Gaps = 110/434 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T +D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMGMDTHF-----MTGLDEH---GQKVEQAAEQNGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K T  F      L         R T   H   +  ++  +   G  Y+   E 
Sbjct: 66  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEDRHKKAVKRILDTVNAKGDIYKGEYEG 124

Query: 153 IFDTS--------------SIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFIL 193
            +  S                P+ G   R   +E              K+ +++P DFIL
Sbjct: 125 KYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHP-DFIL 183

Query: 194 WKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLG 228
                     +            + +  G P      HI            ++       
Sbjct: 184 PHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFENDD 243

Query: 229 KVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
           K FD        +H  G D+I  H         C       K  +  + +G+   EG KM
Sbjct: 244 KKFDKFWNNARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------THY---------REPI-- 320
           SKS GN +   + +       + +     R  +L          Y            +  
Sbjct: 300 SKSRGNVVNPYDEI-------KKYGVDAFRYYLLREVNFGTDGDYSTKGIIGRLNSDLAN 352

Query: 321 ---DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND-----------LNTVSAIQ 366
              +   + L   +   +     S++   ID  + + +++D                A++
Sbjct: 353 DLGNLLNRTLGMYKKYFNSVIVASSTAEPIDDEIKT-MFDDIIKDVEKYMYLFEFSRALE 411

Query: 367 ALHKLARESTKNHD 380
            + K      K  D
Sbjct: 412 TIWKFISRLNKYID 425


>gi|224369775|ref|YP_002603939.1| methionyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
 gi|223692492|gb|ACN15775.1| MetS [Desulfobacterium autotrophicum HRM2]
          Length = 648

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 11/117 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV  R  R     +   ++    +  DKI+E A +E        
Sbjct: 16  VNAKPHLGHAYTTIATDVAARYSRMCA--RPTYFLTGTDEHGDKIVEAATRE------ET 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
           +      + +  F     RL      H  R T  +HI  +  L+  I   G  Y + 
Sbjct: 68  SPKAYVDRISALFKNLWPRLNISN-DHFIRTTDPDHIKVVENLLTRIHESGDIYFSE 123



 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 18/101 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H    D+I PH          A  I+   ++ +H GF N+ G KMSKS GN     E+++
Sbjct: 257 HFVAKDIIKPHGIYWPCMLKAA-GIDPYQSLNVH-GFWNVGGSKMSKSIGNVTDPVEIID 314

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPI-----DFTVQRLTE 329
           T       +     R  ++    RE +     +FT   + +
Sbjct: 315 T-------YGVDTFRYFLM----REMVFGLDSNFTEDSIVQ 344


>gi|197283930|ref|YP_002149802.1| isoleucyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|254782426|sp|B4F2T5|SYI_PROMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|194681417|emb|CAR40255.1| isoleucyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 936

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 49/130 (37%), Gaps = 11/130 (8%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 549 EFHGNSADLYLEGSDQHRGWFMSSLMISTAIKGKAPYREVLTHGFTVDGQGRKMSKSIGN 608

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            ++  +++           A ++RL +  T Y   I  + + L  +     +   T+   
Sbjct: 609 TVSPQDVMNKLG-------ADILRLWVASTDYTGEIAVSDEILKRSADTYRRIRNTARFF 661

Query: 342 -TSKGIIDPA 350
             +    DPA
Sbjct: 662 LANLNGFDPA 671


>gi|15606482|ref|NP_213862.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|7388279|sp|O67298|SYM_AQUAE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78101749|pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101750|pdb|2CSX|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met)
 gi|78101753|pdb|2CT8|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|78101754|pdb|2CT8|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
           Synthetase Complexed With Trna(Met) And
           Methionyl-Adenylate Anologue
 gi|2983692|gb|AAC07256.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 497

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 15/126 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I  D + R  R    +  V ++    +   KI ++A +      +  
Sbjct: 16  VNDVPHLGHAYTTIAADTIARYYRLR--DYDVFFLTGTDEHGLKIQKKAEE------LGI 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL----HGHAYEANN 150
           +   +  +N ++F K    L     T   R T+  P  +  +Q +       G  Y    
Sbjct: 68  SPKELVDRNAERFKKLWEFLKIEY-TKFIRTTD--PYHVKFVQKVFEECYKRGDIYLGEY 124

Query: 151 EIIFDT 156
           E  +  
Sbjct: 125 EGWYCV 130


>gi|288553142|ref|YP_003425077.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544302|gb|ADC48185.1| isoleucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 921

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 11/113 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ +GRKMSKS GN +  N+++       +   A ++RL +
Sbjct: 569 SVAVTGKAPYKGVLSHGFALDGQGRKMSKSVGNVVVPNDVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN 360
               Y+  +  + + L +      K   T      +    DPAV      DL+
Sbjct: 622 ASVDYQSDVRVSDKILKQVSESYRKIRNTFRFLLGNLHDFDPAVNRVKNEDLD 674


>gi|253995905|ref|YP_003047969.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982584|gb|ACT47442.1| isoleucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 938

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 48/139 (34%), Gaps = 25/139 (17%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  G KMSKS GN +   ++++T       + A ++RL + 
Sbjct: 592 CAIDGHAPYKALLTHGFVVDGSGHKMSKSKGNVVAPQKVMDT-------YGADILRLWVA 644

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            T Y   +  + + L        +   T          +L+ L +               
Sbjct: 645 STDYSGELTISDEILKRVAESYRRIRNTLR-------FLLANLAD-----------FDAT 686

Query: 373 RESTKNHDLLPIFNASAHI 391
           ++     + L I   + H+
Sbjct: 687 KDLLPVSEWLEIDRYALHL 705


>gi|269792806|ref|YP_003317710.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100441|gb|ACZ19428.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 647

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 39/129 (30%), Gaps = 21/129 (16%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  DVL R  R    +   T+    TD   + I++A           
Sbjct: 16  VNDVPHIGHAYTTIAADVLARHNRMIGRD---TFFLTGTDEHGQKIQQAASAK-----GL 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTH-------QPRATNHIPQMIYLIQNIILHGHAYE 147
               +  +  + F +    L                R   HI         ++  G  Y 
Sbjct: 68  TAQQLADQTVENFKRLWKVLNITNDDFIRTTEERHERVVQHIF------SKLLEKGDIYL 121

Query: 148 ANNEIIFDT 156
            + E  +  
Sbjct: 122 GSYEGWYCV 130



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 69/217 (31%), Gaps = 59/217 (27%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEK---TANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H  G D+I  H     A     D        A+ W       ++G KMSKS GN +   E
Sbjct: 257 HLVGKDIIRFHSVVWPALLMALDLEPPKMVFAHGWW-----TVDGDKMSKSKGNVVDPFE 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQRL---------TEAEILLSK 336
           + E        +     R  +L    RE       DF+ + L          +   LL++
Sbjct: 312 MAEL-------YGPDPFRYFLL----REVPFGLDGDFSERGLVQRINSDLANDLGNLLNR 360

Query: 337 WPQ--TSTSKGIIDPAV--------LSALYND-----------LNTVSAIQALHKLARES 375
             Q  T    G++   V        + A+  D                A++A+      +
Sbjct: 361 TLQMMTKYRGGVVPSRVCPTKLESSIRAMGEDVTAQVDSLLERFAFDEALKAIWSFIGRA 420

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
            K  D           LG E   E L++ +    E L
Sbjct: 421 NKYID-----ETMPWKLGNEGRGEELDRVLRTLFEAL 452


>gi|157415105|ref|YP_001482361.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386069|gb|ABV52384.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 628

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 122 HYCISCESF 130



 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   EG KMSKS GN +   E+++       ++ +   R  +L    +    DF+   
Sbjct: 285 HGWWTKEGEKMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENM 337

Query: 327 L 327
           L
Sbjct: 338 L 338


>gi|222055264|ref|YP_002537626.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782500|sp|B9M9F3|SYL_GEOSF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221564553|gb|ACM20525.1| leucyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 824

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 56/146 (38%), Gaps = 39/146 (26%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  N L+E        + A   RL  +      
Sbjct: 564 EPFTNL-LTQGMVIKDGSKMSKSKGNVVDPNALIE-------KYGADTARLFSLFAAPPE 615

Query: 318 EPIDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLS---------------AL 355
           + +D++ Q +  +   L++  +         ++ G +D A L+                +
Sbjct: 616 KDLDWSDQGVDGSYRFLNRVWKLVYECLPLISATGPLDAAALTDEGKTLRRLVHKTIRKV 675

Query: 356 YND------LNTVSAIQALHKLARES 375
            +D       NT  AI A+ ++    
Sbjct: 676 SDDIEDRFHFNT--AIAAIMEMVNAI 699


>gi|116747573|ref|YP_844260.1| isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116696637|gb|ABK15825.1| Isoleucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 928

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 13/120 (10%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN I   E++       R + A V+RL +    YR+ +  +   
Sbjct: 592 HGFVVDGQGYKMSKSLGNVIAPEEII-------RQYGAEVLRLWVSAEDYRDDVRISPDI 644

Query: 327 LTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
           L        +   T      +    DP   S  Y+ ++ +   A+  L +  R   + ++
Sbjct: 645 LKRLSEAYRRIRNTCRFLLGNLNDFDPEKDSVPYDRMDELDRFALHQLQEFVRRVRQAYE 704


>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|259511506|sp|C5CHA1|SYI_KOSOT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 921

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 70/186 (37%), Gaps = 24/186 (12%)

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           E        L    D++  G D      ++ +  S   + +    ++  H    + +GRK
Sbjct: 533 EAVVKVMDELRFPADVYIEGSDQHRGWFQSSLLLSVGTEGVAPFKSVITHGFINDEQGRK 592

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN +   E+          + A ++RL +  ++Y+E I  ++  + +      K 
Sbjct: 593 MSKSLGNAVDPQEI-------NNKYGAEILRLWVASSNYQEDIRISMNIIQQQIENYKKI 645

Query: 338 PQT-----------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
             T           S    +    +L      L+   AI  LHKL R+ T+ +D    + 
Sbjct: 646 RNTLRYLLGNLSDYSPQDSVPYEELLE-----LDKW-AIMKLHKLIRDVTRYYDRYEFYK 699

Query: 387 ASAHIL 392
               IL
Sbjct: 700 VFQSIL 705


>gi|67922684|ref|ZP_00516188.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
 gi|67855466|gb|EAM50721.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Crocosphaera watsonii WH 8501]
          Length = 853

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 49/174 (28%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              +    + Y      Y     H+G+ R  ++ DV+ RL R       V +        
Sbjct: 26  TPENSDKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I  N   +  T +N  Q  +    L  L+           P      
Sbjct: 84  LPAENAA------IDRNIPPADWTKQNIAQMRQQLQTLG-LSIDWDREVATCFPDYYKWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 137 QWLFLQFYQSGLAYQKEAAVNWDPIDQT---VLANEQVDSEGYSWRSGAKVERK 187


>gi|332799462|ref|YP_004460961.1| leucyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332697197|gb|AEE91654.1| leucyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 816

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 63/179 (35%), Gaps = 36/179 (20%)

Query: 230 VFDIHGGGLDLIFPHHENE------IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H          I  +      E   N+ +  G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAILHLMYSRFFNKVIRDAGLVTVDEPFENL-LTQGMVLRDGVKMSKSIG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT-- 340
           N ++  E++E        + A   RL +L        ++++ Q +      L +  +   
Sbjct: 587 NTVSPEEIIE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLQRVFRLVE 639

Query: 341 --------STSKGIIDPAV-------LSALYND----LNTVSAIQALHKLARESTKNHD 380
                   + + G  D  V       +  +  D     N  +AI A+ ++      + D
Sbjct: 640 ELSNKLSNAGNFGEYDKDVRRITHKTIKKVTEDVSERFNFNTAISAIMEMVNGLNAHKD 698


>gi|282163406|ref|YP_003355791.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155720|dbj|BAI60808.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 669

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 8/94 (8%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+I+ H     A    A          + +G + +  +K SKS G  + + +  
Sbjct: 286 IHFIGGDIIYHHCIFWPAMLKGAGYTLPWGV--VASGMIKVNDKKFSKSRGYIVWVED-- 341

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQ 325
               +    +   ++R  +L  T + + I+F+ +
Sbjct: 342 ---DYLAHGFHPDLLRYYILSYTSHTKDINFSWK 372



 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 44/123 (35%), Gaps = 12/123 (9%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P     AHIG+ R  I  D+  R LR     +  T+V         I+  A ++  
Sbjct: 13  TCGLPYANGAAHIGHLRTYIPADMFVRTLRMMG--QNTTFVCGSDTHGTPIVVNAEEQGT 70

Query: 89  SI-PINDAISIITSKNTQQFVKDTTRLACLAP-THQPRATNHIPQMIYLIQNIILHGHAY 146
           +   +     ++  +  + F  D           +  R T  I      ++++  +G+ Y
Sbjct: 71  TPGELVKKYHLVFEQTFKNFEIDFNHYGSTDDLENHER-TRSI------VRDLEKNGYVY 123

Query: 147 EAN 149
              
Sbjct: 124 PKE 126


>gi|306832631|ref|ZP_07465770.1| leucine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304425239|gb|EFM28366.1| leucine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 837

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 613 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 665

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     L A+    NT  AI  L      + K
Sbjct: 666 DRVYRLLTTKEIVAENNGNLDKVYNETVKAVTEQLEAM--KFNT--AIAQLMVFVNAANK 721

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              L   +      L +     HL++ +
Sbjct: 722 EDKLFADYAKGFVQL-LAPFAPHLSEEL 748


>gi|288904357|ref|YP_003429578.1| leucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731082|emb|CBI12628.1| leucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 833

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     L A+    NT  AI  L      + K
Sbjct: 662 DRVYRLLTTKEIVAENNGNLDKVYNETVKAVTEQLEAM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              L   +      L +     HL++ +
Sbjct: 718 EDKLFADYAKGFVQL-LAPFAPHLSEEL 744


>gi|225850337|ref|YP_002730571.1| leucyl-tRNA synthetase [Persephonella marina EX-H1]
 gi|225646026|gb|ACO04212.1| leucyl-tRNA synthetase [Persephonella marina EX-H1]
          Length = 608

 Score = 47.5 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 37/133 (27%), Gaps = 15/133 (11%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P   + YV    P      H+G+ R   + DV+ R LR     K   +           
Sbjct: 29  KPDKDKFYVLEMFPYPSGRIHMGHVRNYAIGDVVNRYLRMKG--KNTLHPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      I      +  T +N     K+  RL           T   P+     Q  
Sbjct: 87  ENAA------IKSGVHPAKWTYENIDYMKKELKRLGFSY-DWNREVTTCSPEYYRWNQWI 139

Query: 138 --NIILHGHAYEA 148
              +   G AY  
Sbjct: 140 FLKMYEKGIAYRK 152


>gi|289803417|ref|ZP_06534046.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. AG3]
          Length = 131

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             E    +  H   ++ +GRKMSKS GN ++  +++           A ++RL +  T Y
Sbjct: 2   GKEPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLWVASTDY 54

Query: 317 REPIDFTVQRLTEAEILLSKWPQTST 342
              +  + + L  A     +   T+ 
Sbjct: 55  TGEMAVSDEILKRAADSYRRIRNTAR 80


>gi|223039853|ref|ZP_03610137.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878862|gb|EEF13959.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 639

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 13/126 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D + R  R    +   TY    TD         + E  +     
Sbjct: 13  VNDVPHIGHAYTTVIADTVARFARLKGDD---TYFMTGTD-----EHGQKIEQAAAKKGY 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNE 151
                  + + +F +   +       H  R T+    +      +  +   G  Y+   E
Sbjct: 65  TPQAYADEISAKFRELWDKFEISY-DHFIRTTDDYHKLTAQNAFL-KMYQKGDIYKGEYE 122

Query: 152 IIFDTS 157
             +  S
Sbjct: 123 GYYCVS 128



 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 8/63 (12%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   +G KMSKS GN I  +E+ +       ++     R  ML    + +  DF+ + 
Sbjct: 288 HGWWTRDGEKMSKSKGNVINPSEVAD-------AYGLENFRYFMLREVPFGQDGDFSQKA 340

Query: 327 LTE 329
           + E
Sbjct: 341 MIE 343


>gi|162149625|ref|YP_001192004.2| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 938

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 72/212 (33%), Gaps = 42/212 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NGF+  EG+KMSKS  N + + 
Sbjct: 572 PLDLRHSGPDLIPNHLSFFIFNHAGIFPENLWPRGVAVNGFILYEGKKMSKSLRNIVPLR 631

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +       R++ A VIR+A+          +FT          L ++ +         
Sbjct: 632 KAI-------RTYGADVIRIALSSLVDMSSDANFTEAGARAIADNLKRFYELMQ------ 678

Query: 349 PAVLSALYN----DLNTVSAI--QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                 + +    D  T        LH+L R+ T   + +        +L          
Sbjct: 679 ------MQDGSTID-GTPEKWLRSKLHRLVRDVTPLMESMRFREVINELL---------- 721

Query: 403 KNISIAIEKLVQE-RLILLKMKKFSSADYIRK 433
            N+S  I + ++  R    +   ++  D IR+
Sbjct: 722 FNLSSYINEYLEMVRSESRE---YNR-DVIRE 749



 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 12/93 (12%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYVRNITDIDDKIIERARQEHPSI 90
           P      H+G+ R  +  DV  R +R         + +    T I     + A+ +   +
Sbjct: 35  PYPNSPFHLGHGRTYVTGDVYARFMRMKGYNVLFPMGFHFTGTPIITMADDVAKGDKDLL 94

Query: 91  PINDAISIITSKNT----------QQFVKDTTR 113
            I   I  I +               F +D   
Sbjct: 95  DIFQNIYEIPADVIPKLSDPLFMANYFKEDIKA 127


>gi|189082975|sp|A4YI28|SYL2_METS5 RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
           ligase 2; Short=LeuRS 2
 gi|145702938|gb|ABP96080.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 950

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 72/212 (33%), Gaps = 42/212 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NGF+  EG+KMSKS  N + + 
Sbjct: 584 PLDLRHSGPDLIPNHLSFFIFNHAGIFPENLWPRGVAVNGFILYEGKKMSKSLRNIVPLR 643

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +       R++ A VIR+A+          +FT          L ++ +         
Sbjct: 644 KAI-------RTYGADVIRIALSSLVDMSSDANFTEAGARAIADNLKRFYELMQ------ 690

Query: 349 PAVLSALYN----DLNTVSAI--QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                 + +    D  T        LH+L R+ T   + +        +L          
Sbjct: 691 ------MQDGSTID-GTPEKWLRSKLHRLVRDVTPLMESMRFREVINELL---------- 733

Query: 403 KNISIAIEKLVQE-RLILLKMKKFSSADYIRK 433
            N+S  I + ++  R    +   ++  D IR+
Sbjct: 734 FNLSSYINEYLEMVRSESRE---YNR-DVIRE 761



 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 28/93 (30%), Gaps = 12/93 (12%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYVRNITDIDDKIIERARQEHPSI 90
           P      H+G+ R  +  DV  R +R         + +    T I     + A+ +   +
Sbjct: 47  PYPNSPFHLGHGRTYVTGDVYARFMRMKGYNVLFPMGFHFTGTPIITMADDVAKGDKDLL 106

Query: 91  PINDAISIITSKNT----------QQFVKDTTR 113
            I   I  I +               F +D   
Sbjct: 107 DIFQNIYEIPADVIPKLSDPLFMANYFKEDIKA 139


>gi|260893645|ref|YP_003239742.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260865786|gb|ACX52892.1| leucyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 824

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
              E   N+ +  G +  +G KMSKS GN ++  E++E        + A   RL +L   
Sbjct: 561 SCDEPFTNL-LTQGMVLKDGAKMSKSKGNIVSPEEIIE-------HYGADTTRLFILFAA 612

Query: 315 HYREPIDFTVQRLTEAEILLSK 336
                ++++ + +      L++
Sbjct: 613 PPERDLEWSDEGVEGCARFLNR 634



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 35/140 (25%), Gaps = 15/140 (10%)

Query: 19  QAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
                   + Y     P      H+G+ R   + DV+ R  R       V +        
Sbjct: 26  VPDFEDKPKYYCLEMFPYPSGKLHMGHVRNYAIGDVVARFKRMQGY--SVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A +              T +N     +   +L      H+  AT H P      
Sbjct: 84  LPAENAAIKHGIH------PHDWTWQNISFMREQLKQLGFSYDWHREIATCH-PDYYRWT 136

Query: 137 Q----NIILHGHAYEANNEI 152
           Q         G AY     +
Sbjct: 137 QWLFLQFFHRGLAYRKKAPV 156


>gi|163942206|ref|YP_001647090.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163864403|gb|ABY45462.1| valyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 881

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 66/177 (37%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PADF  W +   +   W S   W     GW  E +A    +     D    G D+I
Sbjct: 433 GTEAPADFENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKKF--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|160933116|ref|ZP_02080505.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
 gi|156868190|gb|EDO61562.1| hypothetical protein CLOLEP_01959 [Clostridium leptum DSM 753]
          Length = 931

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ EGRKMSKS GN I   E+++        + A ++RL +
Sbjct: 581 SVATKGTAPYKAVVTHGWVVDGEGRKMSKSLGNGIEPQEIVD-------QYGADILRLWV 633

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             + Y   I  +   L +      K   T+ 
Sbjct: 634 ASSDYHADIRISKDILKQLSEAYRKIRNTAR 664


>gi|159481678|ref|XP_001698905.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
 gi|158273397|gb|EDO99187.1| isoleucyl-tRNA synthetase [Chlamydomonas reinhardtii]
          Length = 902

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 41/108 (37%), Gaps = 6/108 (5%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A+ +     +  H   L+  G+KMSKS GN +    ++E  K       + A V+RL
Sbjct: 549 SVAANGVAPYKAVLTHGFVLDERGQKMSKSLGNVVDPRVVIEGGKDAKSQPAYGADVLRL 608

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLS 353
            +    Y   +      L +   +  K   T      +    DPA  +
Sbjct: 609 WVASVDYTSDVAIGGAILKQMADMYRKVRGTLRFLLGNLSDYDPAAHA 656


>gi|197120011|ref|YP_002140438.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|197089371|gb|ACH40642.1| isoleucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 925

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 23/144 (15%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H + +A S          N+  H   ++  GRKMSKS GN +   +++       + +  
Sbjct: 571 HSSLLA-SVGTRGRAPYKNVLTHGFVMDGAGRKMSKSVGNVVAPEDVI-------KKFGG 622

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPAVLSALYNDLNTVS 363
            V+RL +    YR+ +  + + LT       +   T     G I         ND N   
Sbjct: 623 DVLRLWVAAQDYRDDLRISQEILTRLSESYRRIRNTCRYILGNI---------NDFN-PD 672

Query: 364 ----AIQALHKLARESTKNHDLLP 383
               A   + +L R +    +LL 
Sbjct: 673 TDLVAYADMPELDRWAMHQLELLK 696


>gi|126739586|ref|ZP_01755278.1| isoleucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
 gi|126719232|gb|EBA15942.1| isoleucyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
          Length = 980

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 634 QACGTKGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPEEVV-------KQYGADILRLW 686

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 687 VAQTDYTTDQRIGPEILKGTADSYRRLRNT 716


>gi|119470026|ref|ZP_01612831.1| isoleucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119446736|gb|EAW28009.1| isoleucyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 942

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 69/205 (33%), Gaps = 19/205 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   L    D++  G D       + +  S   +       +  H   ++  GRKM
Sbjct: 550 CVVDARDELVGPADLYLEGSDQHRGWFMSSMMTSVAINGHAPYKQVLTHGFTVDENGRKM 609

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I+   ++           A ++RL +  T Y   +  + +    +     +  
Sbjct: 610 SKSLGNVISPQNVMNKLG-------ADILRLWVASTDYTAEMTVSDEIFKRSADRYRRIR 662

Query: 339 QTS----TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNASAHIL 392
            TS     +    DP       +D      +  L K    R +    ++L  +++   +L
Sbjct: 663 NTSRYLLANLNGFDPKTDQVAVDD------MVELDKWIVGRAAQLQDEILAAYDSYQMLL 716

Query: 393 GIEVCKEHLNKNISIAIEKLVQERL 417
             +         +      ++++R 
Sbjct: 717 VTQKLMNFCTGELGSFYLDVIKDRQ 741


>gi|189425175|ref|YP_001952352.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189421434|gb|ACD95832.1| leucyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 825

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 22/145 (15%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  + L+       + + A   RL  +      
Sbjct: 566 EPFTNL-LTQGMVIKDGAKMSKSKGNVVDPDALI-------KRYGADTARLFSLFAAPPE 617

Query: 318 EPIDFTVQRLTEAEILLSK-WP------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           + +D+  Q +      L++ W       +   +   +DP   SAL ++  T+   +A+HK
Sbjct: 618 KDLDWNEQGVDGCYRFLNRVWKLVHEQLEAVAAAPALDP---SALSDEERTLR--RAVHK 672

Query: 371 LARESTKNHDLLPIFN-ASAHILGI 394
             ++ T++ D    FN A A ++ +
Sbjct: 673 TLKKVTEDIDERFHFNTAIAAVMEL 697


>gi|315641423|ref|ZP_07896496.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
 gi|315482810|gb|EFU73333.1| ehrlichia chaffeensis immunodominant surface protein [Enterococcus
           italicus DSM 15952]
          Length = 898

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 60/159 (37%), Gaps = 14/159 (8%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P+D   W +   +   W S   W     GW    SA    Y      +   G D+IF   
Sbjct: 453 PSDPENWHQDNDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLV--TGYDIIFFWV 510

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   E++E        + A 
Sbjct: 511 SRMIFQSLEFTDRRPFKNVLMHGLIRDEQGRKMSKSLGNGIDPMEVIE-------KYGAD 563

Query: 306 VIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  +        + + F+ +++  A   ++K    S 
Sbjct: 564 ALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKIWNASR 601


>gi|326319246|ref|YP_004236918.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
 gi|323376082|gb|ADX48351.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
          Length = 897

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 41/143 (28%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D    + Y C    Y     H+G+ R   + D+L R LR       +          
Sbjct: 26  VTEDAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGW------ 79

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D     A  E+ ++      +  T  N     K    +  LA           P      
Sbjct: 80  DAFGLPA--ENAALKNGVPPAQWTYDNIAYMKKQMQAMG-LAIDWSREVATCDPDYYRWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLEKGIAYRKTQVVNWD 159


>gi|300711986|ref|YP_003737800.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299125669|gb|ADJ16008.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 692

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 10/122 (8%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      HIG+ R  +  D L R LR     +   +V         +   A +E  
Sbjct: 15  TCGLPYANGDLHIGHLRTYVSGDTLARSLRRLG--QQTAFVSGSDMHGTPVAVNAERE-- 70

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QPRATNHIPQMIYLIQNIILHGHAYE 147
                        +  +++ +           +       +       ++  I +GH YE
Sbjct: 71  ----GITPEEFALEYHEEYAETFPEFGVEFDNYGHTHDETNTELTREFVREWIDNGHVYE 126

Query: 148 AN 149
             
Sbjct: 127 KE 128



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 9/98 (9%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+I  H     +    AD  E      + +GF+NL+G+  S S    I  ++ L
Sbjct: 296 IHVIGRDIIQHHTVFWPSMLRGADYNEP--RAVMASGFVNLDGKAFSTSRNRAIWADDYL 353

Query: 293 ETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTE 329
                    +   ++R  ++ T  +++ +DF+ +R  E
Sbjct: 354 ------AEGFDPDLLRYYLVTTGGFQQDVDFSWERFQE 385


>gi|255263999|ref|ZP_05343341.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255106334|gb|EET49008.1| arginyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 579

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 70/389 (17%), Positives = 127/389 (32%), Gaps = 65/389 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +  D L  LL Y   +    Y  N  D   ++   AR        
Sbjct: 131 PT--GPLHVGHVRGAVFGDALASLLAYAGYDVTREYYIN--DGGAQVDVLARSVFLRYLE 186

Query: 93  NDAISIITSKNT-----------QQFVKDTTRL-ACLAPTHQPRATNH-IPQMIYLIQNI 139
            +   +     T             F      L                   M+ LI++ 
Sbjct: 187 ANGQEVAFEDGTYPGDYLIPLGQALFEMHGDALVGKDEADWLEDVREFATDAMMNLIRSD 246

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSF--SRRKIDEQKMGTRVPEKYHK-KNPADF----- 191
           +    A     ++ +   S+   G    S  ++D + +  R   +  K K P D+     
Sbjct: 247 LA---ALGIEMDVFYSEKSLYGTGQIEKSIAELDAKGLIYRGTLEPPKGKKPEDWEPREQ 303

Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HGGGLDLI 241
            L+K +   +   + P  +    W      ++ HY        ++ D+    HGG +  +
Sbjct: 304 TLFKSTEHGDDV-DRPIQKSDGAWTYFAPDIAYHYDKISREFDELIDVFGADHGGYVKRM 362

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
                 + A S  +D              L   G   KMSK  G FIT+ ++++      
Sbjct: 363 ------KAAVSALSDGQVPLDVKLTQLVKLTKNGEPFKMSKRAGTFITLRDVVDQVG--- 413

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI---LLSKWPQTSTSKGIIDPAVLSALY 356
                 V R  ML      P+DF   ++TE      +       +  + ++  AV + + 
Sbjct: 414 ----PDVTRFVMLTRKQDAPLDFDFDKVTEQSKDNPVFYVQYAHARVQSVLRKAVEANID 469

Query: 357 --NDLNTVSAIQALHKLARESTKNHDLLP 383
             +D     A+ ++  LA  + +    L 
Sbjct: 470 VSDD-----ALSSV-DLAGMTNEGELALA 492


>gi|164660544|ref|XP_001731395.1| hypothetical protein MGL_1578 [Malassezia globosa CBS 7966]
 gi|159105295|gb|EDP44181.1| hypothetical protein MGL_1578 [Malassezia globosa CBS 7966]
          Length = 1111

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 50/146 (34%), Gaps = 29/146 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         E        NG L L G KMSKS GN +++ 
Sbjct: 697 PMDLRSSGKDLINNHLTFCIYNHAALFPEELWPRGMRANGHLMLNGAKMSKSTGNSLSLR 756

Query: 290 EL-------------------LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +                    +E   F  ++  A ++RL  L       ID+  + + + 
Sbjct: 757 QAVEKFGADATRVSLADAGDGIEDANFEEKTANANILRLHTL-------IDWCTEMMQQ- 808

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALY 356
            +  +K  +T       D    + + 
Sbjct: 809 -VRENKL-RTGALDSFWDKTFENEMN 832


>gi|290890940|ref|ZP_06554004.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
 gi|290479339|gb|EFD87999.1| hypothetical protein AWRIB429_1394 [Oenococcus oeni AWRIB429]
          Length = 902

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q+          N+ IH    + +GRKMSKS GN I   +++   
Sbjct: 501 TGYDIIFFWISRMIFQAKEFTGTRPFKNVLIHGLIRDSKGRKMSKSLGNGIDPMDVIN-- 558

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
                 +    +R  +       P   ++F+  ++  A   ++K 
Sbjct: 559 -----KYGTDALRWFLSTGS--TPGQDLNFSNDKMDSAWNFINKI 596


>gi|294950533|ref|XP_002786677.1| Leucyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239900969|gb|EER18473.1| Leucyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 1095

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 9/79 (11%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
             G DLI  H    +                 +  NG + ++  KMSKS GNF+T+++  
Sbjct: 689 CSGKDLIPNHLTMCLYSHAAIWEDRPDLWPEAFFTNGHVMVDDEKMSKSRGNFLTLDQAC 748

Query: 293 ETKKFGGRSWPAPVIRLAM 311
                    + A   RLA+
Sbjct: 749 G-------EFSADATRLAL 760


>gi|118586620|ref|ZP_01544060.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
 gi|118432935|gb|EAV39661.1| valine-tRNA ligase [Oenococcus oeni ATCC BAA-1163]
          Length = 918

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q+          N+ IH    + +GRKMSKS GN I   +++   
Sbjct: 517 TGYDIIFFWISRMIFQAKEFTGTRPFKNVLIHGLIRDSKGRKMSKSLGNGIDPMDVIN-- 574

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
                 +    +R  +       P   ++F+  ++  A   ++K 
Sbjct: 575 -----KYGTDALRWFLSTGS--TPGQDLNFSNDKMDSAWNFINKI 612


>gi|323141827|ref|ZP_08076692.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413698|gb|EFY04552.1| isoleucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 929

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++  H   ++ +GRKMSKS GN I   +++       + + A +IRL  
Sbjct: 579 SVAVAGRAPYESVLTHGYVVDGDGRKMSKSVGNVIVPQDVI-------KQYGADIIRLWT 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+  I  + + L +   +  K   T
Sbjct: 632 ASSDYKADIRISPKILKQLAEVYRKIRNT 660



 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 12/125 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA-------RQEHPSIP 91
            H+G+A   I+ D++ +    Y       YV         I   A       R E   + 
Sbjct: 63  IHMGHALNKILKDIIMKY--KYARGFDTPYVPGWDTHGMPIEHAAIKELGLNRNELDPLT 120

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGHAYEA 148
           +         +      +D  RL  L     P  T H     + I +   +   G+ Y+ 
Sbjct: 121 LRRKCHDFALQWVDIQREDFKRLGVLGDWENPYITLHHSFEAEQIRVFGTMANKGYIYKG 180

Query: 149 NNEII 153
              + 
Sbjct: 181 KKTVY 185


>gi|306830390|ref|ZP_07463560.1| leucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304427415|gb|EFM30517.1| leucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 837

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 613 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 665

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     L A+    NT  AI  L      + K
Sbjct: 666 DRVYRLLTTKEIVAENNGNLDKVYNETVKAVTEQLEAM--KFNT--AIAQLMVFVNAANK 721

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              L   +      L +     HL++ +
Sbjct: 722 EDKLFADYAKGFVQL-LAPFAPHLSEEL 748


>gi|157960911|ref|YP_001500945.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189082333|sp|A8H1H3|SYI_SHEPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157845911|gb|ABV86410.1| isoleucyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 940

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFNGHPIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGQGRKMSKSVGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + Q L  +     +   T+ 
Sbjct: 613 VIAPQHVTNKLG-------ADILRLWVAATDYSGEMTVSDQILNRSADAYRRIRNTAR 663


>gi|42520232|ref|NP_966147.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|42409970|gb|AAS14081.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 545

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 16/167 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV+ R ++     K V +     +   KI + A+ +        
Sbjct: 16  VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFTTGTDEHGQKIEKAAKAKEMQ----- 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + +  F +   +          R T   H   +I L   +   G  Y  +   
Sbjct: 69  -PKEFTDEVSVSFKE-LAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSYSG 126

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRS 197
            +       Y      ++ + K  T    ++ K+    F L  W+  
Sbjct: 127 WYSVRDEAFYQE---SELIDGKAPTGAEVQWIKEESYFFRLSNWQEK 170


>gi|71894314|ref|YP_278422.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|90101534|sp|Q4A6B0|SYV_MYCS5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71851102|gb|AAZ43711.1| valyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 832

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 74/187 (39%), Gaps = 26/187 (13%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLIF      I  S           +++H    + +GRKMSKS  N I   E++E  
Sbjct: 471 SGYDLIFFWISRMIFLSLEFTNQRPFKEVFMHGLIRDKDGRKMSKSLNNGIDPIEVVE-- 528

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                 + +  +R  ++      P   I +  +++  A  + +K    +     +    L
Sbjct: 529 -----KYGSDALRWFLITN--TAPGMDIRYNQEKIESAWKISNKLYNVALYISSMPDNNL 581

Query: 353 SALYNDLN-----TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
            A  + L+      ++ + AL+K  ++  K +D          I+G+E+ +       S 
Sbjct: 582 EAKSSKLSEQSKWILNKLSALNKQIQKVFKTYD--------FSIIGVEIYQFIFTDLSSW 633

Query: 408 AIEKLVQ 414
            IE L++
Sbjct: 634 YIE-LIK 639


>gi|307720718|ref|YP_003891858.1| Isoleucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978811|gb|ADN08846.1| Isoleucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 922

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +G KMSKS GN I   ++L       + + + ++RL +
Sbjct: 587 SSAVEHKAPYKGVLTHGFTVDEKGEKMSKSKGNVIAPEKVL-------KEYGSEILRLWV 639

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+  +  +   L +      K   T
Sbjct: 640 ASSDYQGDLKISQGILKQTSENYRKLRNT 668


>gi|83589714|ref|YP_429723.1| isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725741|sp|Q2RK59|SYI_MOOTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83572628|gb|ABC19180.1| Isoleucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 930

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EGRKMSKS GN I   +++       R   A V+RL +
Sbjct: 571 AVATRGRAPYRQVLTHGFLVDEEGRKMSKSLGNGIDPADVI-------RQRGADVLRLWV 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR  +  +   + +      K   T
Sbjct: 624 ASADYRRDVAASENIMRQITEAYRKIRNT 652


>gi|116491375|ref|YP_810919.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116092100|gb|ABJ57254.1| valyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 902

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 12/105 (11%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q+          N+ IH    + +GRKMSKS GN I   +++   
Sbjct: 501 TGYDIIFFWISRMIFQAKEFTGTRPFKNVLIHGLIRDSKGRKMSKSLGNGIDPMDVIN-- 558

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
                 +    +R  +       P   ++F+  ++  A   ++K 
Sbjct: 559 -----KYGTDALRWFLSTGS--TPGQDLNFSNDKMDSAWNFINKI 596


>gi|332795876|ref|YP_004457376.1| leucyl tRNA synthetase, catalytic core [Acidianus hospitalis W1]
 gi|332693611|gb|AEE93078.1| leucyl tRNA synthetase, catalytic core [Acidianus hospitalis W1]
          Length = 920

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 28/119 (23%), Gaps = 25/119 (21%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           RK   F           V  P      HIG+ R  +  D+  R +R         +    
Sbjct: 27  RKKKYFIT---------VPFPYTNSPMHIGHGRTYVTADIYARYMRMKGYNVLFPFAFQF 77

Query: 73  T----------------DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           T                DI D        +   I        +     Q+  K    + 
Sbjct: 78  TGTPILSVADAIKRGDQDIIDFFKNVYEIDEEKIKDLSDPYKLAEYFKQEMEKTAKAIG 136


>gi|300811354|ref|ZP_07091851.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497718|gb|EFK32743.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 879

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ +H    + 
Sbjct: 460 GWPDEDSADFKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDE 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   ++++        + A  +R  +L  T   +   F+  ++  A  
Sbjct: 518 QGRKMSKSLGNGIDPMDIID-------KYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN 570

Query: 333 LLSKWPQTST 342
            ++K    S 
Sbjct: 571 FINKLWNASR 580


>gi|255322574|ref|ZP_05363719.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300482|gb|EET79754.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 639

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 40/126 (31%), Gaps = 13/126 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D + R  R    +   TY    TD         + E  +     
Sbjct: 13  VNDVPHIGHAYTTVIADTVARFARLKGDD---TYFMTGTD-----EHGQKIEQAAAKKGY 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNE 151
                  + + +F +   +       H  R T+    +      +  +   G  Y+   E
Sbjct: 65  TPQAYADEISAKFRELWDKFEISY-DHFIRTTDDYHKLTAQNAFL-KMYQKGDIYKGEYE 122

Query: 152 IIFDTS 157
             +  S
Sbjct: 123 GYYCVS 128


>gi|229061501|ref|ZP_04198845.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717735|gb|EEL69385.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 921

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 19/141 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ +GRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS---AIQAL 368
               Y+  +  +   L +   +  K   T           L    +D N      A+  L
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFNPSENTVAVAEL 672

Query: 369 HKLAR-ESTKNHDLLPIFNAS 388
            ++ R    K +DL+     +
Sbjct: 673 REVDRYMLVKLNDLITKVKDA 693


>gi|39997307|ref|NP_953258.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|60390724|sp|Q74AZ0|SYL_GEOSL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39984198|gb|AAR35585.1| leucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 824

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 34/183 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 529 PVDQYIGGIEHAVLHLLYSRFFTKALRDLGYVTVAEPFKNL-LTQGMVIKDGAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS- 341
           N +  + L+E        + A   RL  +      + +D++ Q +  +   L++  +   
Sbjct: 588 NVVDPDALIER-------YGADTARLFTLFAAPPEKDLDWSDQGVEGSFRFLNRVWRLVF 640

Query: 342 ------TSKGIIDPAVLSALYN---DLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHI 391
                  S G  DPA   AL +   DL      + +HK  R+ T + D    FN A + +
Sbjct: 641 EVLPFIGSAGKPDPA---ALGDGARDLR-----RTVHKTIRKVTDDLDERFHFNTAISAV 692

Query: 392 LGI 394
           + +
Sbjct: 693 MEL 695


>gi|113971292|ref|YP_735085.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
 gi|122943610|sp|Q0HFY9|SYI_SHESM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113885976|gb|ABI40028.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-4]
          Length = 940

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I   ++            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQQVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DPA       DL  V  + AL + A  R +    +++  +  
Sbjct: 666 LANLNGFDPAK------DLVAVEDMVALDRWAVRRAAALQQEIIEAYEQ 708


>gi|127512032|ref|YP_001093229.1| isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
 gi|166229769|sp|A3QBX2|SYI_SHELP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126637327|gb|ABO22970.1| Isoleucyl-tRNA synthetase [Shewanella loihica PV-4]
          Length = 940

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EYNGHPVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGQGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPLQVTNKLG-------ADILRLWVAATDYSGEMTVSDEILKRSADAYRRIRNTAR 663


>gi|217077634|ref|YP_002335352.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217037489|gb|ACJ76011.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 638

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 16/160 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I+ D++ R  R    E  V Y+    +   KI++ A+++  +     
Sbjct: 13  VNSEPHIGSAYTTIIGDIIARYKRLMGYE--VFYLTGTDEHGQKIMQAAKKQGKTPQ--Q 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               ++ K  Q   KD          +  R T   HI  + + +  ++ +   Y+   + 
Sbjct: 69  LCDELSKKFEQL-WKDLKITN----DYFIRTTDEEHIKTVQFFVSKMLENEDIYKGKYKG 123

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
            +       Y S    + DE       P       P +F+
Sbjct: 124 WYCVP-CETYWSEDEIEKDE----NNNPVCPSCHRPLNFV 158



 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 17/72 (23%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            I+ H G+L + G+K+SKS GN I   E +       + +   VIR  +     R+ +  
Sbjct: 286 KIFAH-GWLTVNGQKISKSLGNAIDPREFV-------KKYGNDVIRYYLA----RDIVFG 333

Query: 321 ---DFTVQRLTE 329
              DF+ + L  
Sbjct: 334 KDGDFSEENLVN 345


>gi|156081857|ref|XP_001608421.1| methionine- tRNA ligase [Plasmodium vivax SaI-1]
 gi|148800992|gb|EDL42397.1| methionine- tRNA ligase, putative [Plasmodium vivax]
          Length = 886

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 100/328 (30%), Gaps = 74/328 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A  +++ D + R  +    +   T     T  D+  ++ A Q   +   N 
Sbjct: 231 VNGDPHIGHAYEIVLADAIARYHKNIGRKVFFT-----TGADEHGLKIANQAARN---NL 282

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N  +F +    L      +  R T   H      +      +   Y    E 
Sbjct: 283 TPQELCDRNVLKFKELNKLLHVDE-DYYVRTTCEQHKKIAQEIWTKCEENKDIYLGEYEG 341

Query: 153 IFDTS----------SIPNYGS-FSRRKIDEQKMGT--------------RVPEKYHKKN 187
            ++             + NY    +  K+++ K  +               + E  H   
Sbjct: 342 WYNVREETYVPENEAKLMNYRDPLNNIKLEKMKEPSYFFNMSKYQQRLIDYIMENPHFIQ 401

Query: 188 PADFILWKRS----TPMEP-------GWESPWGRGRPGWH---------------IECSA 221
           P      KR+       EP         +  WG   P  H                 C  
Sbjct: 402 PEQ----KRNEILQRLKEPLADLSCSRTKFSWGIPVPSDHKHVMYVWMDALINYYSNCFI 457

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           +         D+H  G D+++ H           +      +++ H   L  +G+KMSKS
Sbjct: 458 VEGKEDYWPADVHLIGKDIVWFHTVIFPTILMSVNVALP-KSVFCHGFVLAGDGKKMSKS 516

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRL 309
            GN +   E++E       S+     R 
Sbjct: 517 LGNVVNPFEIIE-------SYGPDAFRF 537


>gi|269122525|ref|YP_003310702.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268616403|gb|ACZ10771.1| isoleucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 926

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +       +I  H    + +GRKMSKS GN +  +E++         + A ++RL +
Sbjct: 578 SVASTGDAPYKSILTHGFANDAQGRKMSKSLGNQMFPSEIIN-------QYGADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YRE +  +   L +      +   T+ 
Sbjct: 631 ASVDYREDVRISDNILKQVSDSYRRIRNTAR 661


>gi|254464521|ref|ZP_05077932.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206685429|gb|EDZ45911.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 1000

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I  +E++       + + A ++RL 
Sbjct: 654 QACGTKGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPDEVV-------KQYGADILRLW 706

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 707 VAQTDYTADQRIGPEILKGTADSYRRLRNT 736


>gi|195327961|ref|XP_002030685.1| GM25585 [Drosophila sechellia]
 gi|194119628|gb|EDW41671.1| GM25585 [Drosophila sechellia]
          Length = 796

 Score = 47.5 bits (112), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + + +  +R  
Sbjct: 491 MSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGSDALRWW 543

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   LSK   T
Sbjct: 544 VASHGTQHM--SITVSDKLLQQAAENLSKIRGT 574


>gi|298506245|gb|ADI84968.1| leucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 824

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 34/183 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 529 PVDQYIGGIEHAVLHLLYSRFFTKALRDLGYVTVAEPFKNL-LTQGMVIKDGAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS- 341
           N +  + L+E        + A   RL  +      + +D++ Q +  +   L++  +   
Sbjct: 588 NVVDPDALIER-------YGADTARLFTLFAAPPEKDLDWSDQGVEGSFRFLNRVWRLVF 640

Query: 342 ------TSKGIIDPAVLSALYN---DLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHI 391
                  S G  DPA   AL +   DL      + +HK  R+ T + D    FN A + +
Sbjct: 641 EVLPFIGSAGKPDPA---ALGDGARDLR-----RTVHKTIRKVTDDLDERFHFNTAISAV 692

Query: 392 LGI 394
           + +
Sbjct: 693 MEL 695


>gi|238758979|ref|ZP_04620150.1| Isoleucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
 gi|238702790|gb|EEP95336.1| Isoleucyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
          Length = 913

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 7/106 (6%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
           +  T Y   I  + + L  +     +   T+            AL 
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPALD 674


>gi|56421377|ref|YP_148695.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|60390659|sp|Q5KW09|SYL_GEOKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56381219|dbj|BAD77127.1| leucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 805

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 13/137 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 557 KEPFQKLFNQGMILGENNEKMSKSKGNVVNPDDIIESHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++ + L  A   L + W    T  G ++P ++    ND  T+  I   H+  ++ 
Sbjct: 610 EASIAWSTKGLDGARRFLDRVWRLFVTENGELNPNIVDEPAND--TLERIY--HQTVKKV 665

Query: 376 TKNHDLLPIFNASAHIL 392
           T++++ L    A + ++
Sbjct: 666 TEDYESLRFNTAISQLM 682


>gi|329910003|ref|ZP_08275186.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327546321|gb|EGF31342.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 883

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 15/135 (11%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + Y C    Y     H+G+ R   + DV+YR LR       +          D     A 
Sbjct: 40  KFYACSMLPYPSGKLHMGHVRNYTINDVMYRHLRMNGYNVLMPMGW------DAFGMPA- 92

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NII 140
            E+ ++  N   +  T  N     +    +  LA       T   P      Q     ++
Sbjct: 93  -ENAAMANNVPPAQWTYANIAHMKQQMQAMG-LAIDWSREMTACKPDYYKWNQWMFLKML 150

Query: 141 LHGHAYEANNEIIFD 155
             G  Y+    + +D
Sbjct: 151 EKGIVYKKTGTVNWD 165


>gi|258569569|ref|XP_002543588.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
 gi|237903858|gb|EEP78259.1| leucyl-tRNA synthetase [Uncinocarpus reesii 1704]
          Length = 964

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 30/151 (19%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  R               D+   +   A     E+ +I      
Sbjct: 89  HMGHVRVYTISDVLARFKRMKGY-----------DVLHPMGWDAFGLPAENAAIERGINP 137

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI-IFD 155
           +  T +N  +  +    L           T        L   +   G AY+A   +    
Sbjct: 138 ADWTEENIAKMKEQLKALG----------TEF-DWDRRLFLMLHEKGLAYQAKAMVNYDP 186

Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                     +  ++D      R   K  K+
Sbjct: 187 VDKT----VLANEQVDANGCSWRSGAKVEKR 213


>gi|257060679|ref|YP_003138567.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256590845|gb|ACV01732.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 856

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              + +  + Y      Y     H+G+ R  ++ DV+ RL R       V +        
Sbjct: 26  TPENSNKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T KN  Q  +    L  L+   +       P+     
Sbjct: 84  LPAENAA------IDRGIPPAEWTYKNMSQMKQQLQTLG-LSIDWEREVATCAPEYYKWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q     +   G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 137 QWLFLQLYQAGLAYQKEAAVNWDPIDQT---VLANEQVDSEGYSWRSGAKVERK 187


>gi|146276951|ref|YP_001167110.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166232831|sp|A4WQZ1|SYR_RHOS5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145555192|gb|ABP69805.1| arginyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 580

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 112/334 (33%), Gaps = 57/334 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L RLL +   +    Y  N       ++ R+  E      
Sbjct: 133 PT--GPMHVGHVRGAVVGDALARLLVFAGWDVTREYYINDGGAQVDVLARSAYERYREAH 190

Query: 93  NDAISIITSKNTQQFV----KDTTRL----------ACLAPTHQPRATNHIPQMIYLIQN 138
                I        ++    +                C     +  AT  + QMI   ++
Sbjct: 191 GLEPEIREGLYPGDYLIPVGEALKAKYGDSLLDKGEHCWLTDVREFATEMMMQMIR--ED 248

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSF--SRRKIDEQKM-GTRVPEKYHKKNPADF---- 191
           +   G       ++     ++   G    + +++ +  +    V E    K P D+    
Sbjct: 249 LAALG----VEMDVYSSEKALYGTGKIEAALQRLQDMGLIYEGVLEPPKGKTPEDWEPRE 304

Query: 192 -ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HGGGLDL 240
             L++ +   +   + P  +    W      ++ HY        ++ DI    HGG +  
Sbjct: 305 QTLFRSTAHGDDV-DRPVKKSDGSWTYFAPDIAYHYDKVTRGFDQLIDIFGADHGGYVKR 363

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFG 298
           +      + A +  +D         I    L   G   KMSK  G ++T+ +++E     
Sbjct: 364 M------KAAVAALSDGRVPLDIKLIQLVKLWKNGEPFKMSKRAGTYVTLRDVVEQVG-- 415

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQR-LTEAE 331
                A V R  ML       +DF   + L +++
Sbjct: 416 -----ADVTRFVMLTRKNDAALDFDFDKVLEQSK 444


>gi|117921574|ref|YP_870766.1| isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
 gi|166229771|sp|A0KZZ1|SYI_SHESA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117613906|gb|ABK49360.1| Isoleucyl-tRNA synthetase [Shewanella sp. ANA-3]
          Length = 940

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I   ++            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQQVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DPA       DL  V  + AL + A  R +    +++  +  
Sbjct: 666 LANLNGFDPAK------DLVAVEDMVALDRWAVRRAAALQQEIIEAYEQ 708


>gi|114048530|ref|YP_739080.1| isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
 gi|122944450|sp|Q0HS82|SYI_SHESR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113889972|gb|ABI44023.1| Isoleucyl-tRNA synthetase [Shewanella sp. MR-7]
          Length = 940

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMTGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I   ++            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQQVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DPA       DL  V  + AL + A  R +    +++  +  
Sbjct: 666 LANLNGFDPAK------DLVAVEDMVALDRWAVRRAAALQQEIIEAYEQ 708


>gi|329941550|ref|ZP_08290815.1| hypothetical protein SGM_6307 [Streptomyces griseoaurantiacus M045]
 gi|329299267|gb|EGG43167.1| hypothetical protein SGM_6307 [Streptomyces griseoaurantiacus M045]
          Length = 276

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 12/109 (11%)

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
              V+RLA+L      P +     L+ AE  L++W ++               +   + +
Sbjct: 163 DPTVLRLALLSRPRHLPAEPDTGALSGAERTLARWRRSVAGWAEHPSRPVPAGVRARLRA 222

Query: 354 ALYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKE 399
           A  +DL+  +A+  L +L  E             +  +  +LG+E+ +E
Sbjct: 223 AWEDDLDLPAALGVLRELDEEGDGAVPPGARFESYAYADRLLGLELTRE 271


>gi|254501189|ref|ZP_05113340.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222437260|gb|EEE43939.1| arginyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 579

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 66/348 (18%), Positives = 113/348 (32%), Gaps = 54/348 (15%)

Query: 19  QAIDPSNIRM-YVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
           +  DPS + + YV   PT     H+G+ R  +V D L  LL +   E    Y  N     
Sbjct: 107 KTADPSKVNVEYVSANPT--GPMHVGHIRGAVVGDALANLLEFAGNEVVKEYYINDAGSQ 164

Query: 77  DKIIERARQEHPSIPINDAISIITS-------------KNTQQFVKDTTRLACLAPTHQP 123
              + R+        + + I  I +                 +F  D            P
Sbjct: 165 IDTLARSAFLRYREALGEDIGEIPAGLYPGDYLVPVGVALKDEFGSDLRD--QDEADWLP 222

Query: 124 RATN-HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
           +     I  M+ LI++ +    A    +E+ F   S+      +  KID    G R    
Sbjct: 223 KVKERAISAMLELIRSDLA---ALGVEHEVFFSERSLHERSDSNGSKIDHMLDGLRAKGL 279

Query: 183 --------YHKKNPADF-----ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
                      + P D+      L++ S   +   ++     +        A    Y   
Sbjct: 280 VYEGTLPPPKGQVPEDWEDREQTLFRASDYGD---DTDRALKKSDGSYTYFAADVAYFED 336

Query: 230 VF------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKS 281
            F       I+  G D        +      +    +    +     L  +G   KMSK 
Sbjct: 337 KFKRGFKEAIYVLGADHGGYAKRLQAVGKAVSGGDTEVIVRFCQLVKLMRDGAPVKMSKR 396

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           +G+FIT+ E+++             +R  ML      P+DF  +++TE
Sbjct: 397 SGDFITLREVVDEVGSDP-------VRFMMLFRKNDAPLDFDFKKVTE 437


>gi|257452653|ref|ZP_05617952.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317059192|ref|ZP_07923677.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684868|gb|EFS21703.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 640

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 94/334 (28%), Gaps = 77/334 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +         Y    TD         + E  +     
Sbjct: 13  VNGDPHVGSAYTTIAADVMSRYQKLAGNN---VYFLTGTD-----EHGQKVEQTAKEKGF 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                T K    F +    L         R T   H   +  +++ +   G  Y  E   
Sbjct: 65  TPQAWTDKMAPAFTEMWKALNIHYSDF-IRTTEQRHKDSVKKILKTVYEKGDIYKGEYEG 123

Query: 151 EIIFDTSSI------------PNYG-SFSRRKIDE----QKMGTRVPEKYHKKNPADFIL 193
           +      +             P+ G   S  K +              K+ +++P DFIL
Sbjct: 124 QYCISCETFFPENQIVEPGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIEEHP-DFIL 182

Query: 194 WKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLG 228
                     +            + +  G P      HI            +A       
Sbjct: 183 PHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGYENDS 242

Query: 229 KVFDI--------HGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
           + FD         H  G D+I  H         C       K  +  + +G+   EG KM
Sbjct: 243 EKFDTYWNNARVCHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKM 298

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           SKS GN +   + +       + +     R  +L
Sbjct: 299 SKSKGNVVNPYDEI-------KKYGVDAFRYYLL 325


>gi|218247996|ref|YP_002373367.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|226695252|sp|B7JYA9|SYL_CYAP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218168474|gb|ACK67211.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 856

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              + +  + Y      Y     H+G+ R  ++ DV+ RL R       V +        
Sbjct: 26  TPENSNKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T KN  Q  +    L  L+   +       P+     
Sbjct: 84  LPAENAA------IDRGIPPAEWTYKNMSQMKQQLQTLG-LSIDWEREVATCAPEYYKWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q     +   G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 137 QWLFLQLYQAGLAYQKEAAVNWDPIDQT---VLANEQVDSEGYSWRSGAKVERK 187


>gi|332295648|ref|YP_004437571.1| Isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178751|gb|AEE14440.1| Isoleucyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 918

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++  H   ++ EG KMSKS GN I   E++E          A V+R+ +
Sbjct: 569 STAVFGKAPYKSVLTHGFIVDEEGYKMSKSRGNVIAPLEVIEKSG-------ADVLRIWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             + Y   +  + + L +      K   T           + +L ND N
Sbjct: 622 ASSDYTGDVAISDRILEQQSDTYKKLRNTIR--------YMLSLLNDFN 662


>gi|255280019|ref|ZP_05344574.1| leucine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255269110|gb|EET62315.1| leucine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 821

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 54/156 (34%), Gaps = 26/156 (16%)

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            F HH   +      +  E  A        L  +G KMSKS GN +   +++E       
Sbjct: 566 RFWHH--FLYDIGVVNTPEPYAKRTAQGLILGPDGDKMSKSKGNVVDPLDVVE------- 616

Query: 301 SWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSAL-- 355
            + A V+R   + M  Y     ++   +   +  L +    +   S   + P + SA   
Sbjct: 617 EYGADVLRTYVLFMGDYGAATPWSENSVKGCKRFLERVAALTDMVSGEGVTPELESAFHK 676

Query: 356 -----YND-----LNTVSAIQALHKLARESTKNHDL 381
                 ND      NT  AI AL  L  +      L
Sbjct: 677 TIKKVSNDLEETKFNT--AIAALMGLVNDIYAKGSL 710


>gi|229551470|ref|ZP_04440195.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258540783|ref|YP_003175282.1| methionyl-tRNA synthetase/protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
 gi|229315153|gb|EEN81126.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257152459|emb|CAR91431.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus Lc 705]
          Length = 660

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIGNA   I  DVL R  R    +        +T  D+  ++ 
Sbjct: 4   KPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFF-----LTGTDEHGLKI 58

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNII 140
            ++         A     +   +Q  K              R T   H+  +  +++ +I
Sbjct: 59  EQKADKLGVTPQAYVDGMAAQIKQLWKMLEITN----DKFIRTTDKEHVEAVQEIVERLI 114

Query: 141 LHGHAYEANNEIIFDTS 157
             G  Y       +   
Sbjct: 115 KQGDVYLGEYTGWYSVE 131


>gi|257791308|ref|YP_003181914.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257475205|gb|ACV55525.1| isoleucyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 948

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 20/143 (13%)

Query: 252 SCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  A  +     + +H GF ++ EGRKMSKS GN +   E++           A V+RL 
Sbjct: 591 SMGAYGVPPYKAV-MHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSG-------ADVLRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQ 366
           +    Y + +  + + L        +   T      S    D     A+ +     +A++
Sbjct: 643 VASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQ-KDAVSD----WNALE 697

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A   TK+   D+   ++A
Sbjct: 698 PLDQWAMVRTKHLLDDVSAAYDA 720


>gi|238608061|ref|XP_002397132.1| hypothetical protein MPER_02496 [Moniliophthora perniciosa FA553]
 gi|215471001|gb|EEB98062.1| hypothetical protein MPER_02496 [Moniliophthora perniciosa FA553]
          Length = 169

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 16/65 (24%)

Query: 51  DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           DV+ R++  Y+G   V +V NITDIDDKII+RARQ H                   F  D
Sbjct: 1   DVIRRIMSDYFGYD-VHFVMNITDIDDKIIKRARQTHLLET---------------FRAD 44

Query: 111 TTRLA 115
           T  L 
Sbjct: 45  TKSLN 49


>gi|199597844|ref|ZP_03211270.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|258509579|ref|YP_003172330.1| methionyl-tRNA synthetase/ protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|199591280|gb|EDY99360.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|257149506|emb|CAR88479.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
           [Lactobacillus rhamnosus GG]
 gi|259650846|dbj|BAI43008.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 660

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIGNA   I  DVL R  R    +        +T  D+  ++ 
Sbjct: 4   KPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFF-----LTGTDEHGLKI 58

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNII 140
            ++         A     +   +Q  K              R T   H+  +  +++ +I
Sbjct: 59  EQKADKLGVTPQAYVDGMAAQIKQLWKMLEITN----DKFIRTTDKEHVEAVQEIVERLI 114

Query: 141 LHGHAYEANNEIIFDTS 157
             G  Y       +   
Sbjct: 115 KQGDVYLGEYTGWYSVE 131


>gi|167586801|ref|ZP_02379189.1| cysteinyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 58

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 5/61 (8%)

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
                  +  IE  +  R    + K ++ AD IR +L   G  LED          T W+
Sbjct: 2   AQEGALAADEIEARIAARGAAKRAKDYAEADRIRAELLEAGVALEDKPGGS-----TEWR 56

Query: 459 Q 459
           +
Sbjct: 57  R 57


>gi|328957160|ref|YP_004374546.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673484|gb|AEB29530.1| valine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 881

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      + QS          N+ IH    + 
Sbjct: 463 GWPDEDSEDFKRYFPTNTLV--TGYDIIFFWVSRMMFQSLEFTGKRPFNNVLIHGLIRDT 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+  ++  A 
Sbjct: 521 DGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYDKMDAAW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|327390672|gb|EGE89012.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 833

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 74/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYIDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D +R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLLREELQE--IALADEK 807


>gi|325831364|ref|ZP_08164618.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325486618|gb|EGC89066.1| isoleucine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 948

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 20/143 (13%)

Query: 252 SCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  A  +     + +H GF ++ EGRKMSKS GN +   E++           A V+RL 
Sbjct: 591 SMGAYGVPPYKAV-MHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSG-------ADVLRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQ 366
           +    Y + +  + + L        +   T      S    D     A+ +     +A++
Sbjct: 643 VASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQ-KDAVSD----WNALE 697

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A   TK+   D+   ++A
Sbjct: 698 PLDQWAMVRTKHLLDDVSAAYDA 720


>gi|317490445|ref|ZP_07948927.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910438|gb|EFV32065.1| isoleucyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 948

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 20/143 (13%)

Query: 252 SCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  A  +     + +H GF ++ EGRKMSKS GN +   E++           A V+RL 
Sbjct: 591 SMGAYGVPPYKAV-MHCGFTVDGEGRKMSKSLGNGVDPAEVMAKSG-------ADVLRLW 642

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQ 366
           +    Y + +  + + L        +   T      S    D     A+ +     +A++
Sbjct: 643 VASVDYSQDVSISDEILQRTSEAYRRIRNTFRFLLGSLDDFDDQ-KDAVSD----WNALE 697

Query: 367 ALHKLARESTKN--HDLLPIFNA 387
            L + A   TK+   D+   ++A
Sbjct: 698 PLDQWAMVRTKHLLDDVSAAYDA 720


>gi|195590645|ref|XP_002085055.1| GD14596 [Drosophila simulans]
 gi|194197064|gb|EDX10640.1| GD14596 [Drosophila simulans]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  
Sbjct: 600 MSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGTDALRWW 652

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   LSK   T
Sbjct: 653 VASHGTQHM--SITVSDKLLQQAAENLSKIRGT 683


>gi|152990541|ref|YP_001356263.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|151422402|dbj|BAF69906.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 632

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 35/129 (27%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D   R  R    +   T+    TD         + E  +     
Sbjct: 13  VNDVPHIGHAYTTIIADSAARYFRLNGYD---TFFLTGTD-----EHGQKIEEAAKKRGK 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY--EANN 150
                  + + +F                R T   HI  +    + +   G  Y  E   
Sbjct: 65  TPQEYADEISAKFKALWDEFEISY-DKFIRTTNPEHIIGVQKAFEKMYEKGDIYKGEYEG 123

Query: 151 EIIFDTSSI 159
                  + 
Sbjct: 124 HYCISCEAF 132


>gi|83950451|ref|ZP_00959184.1| isoleucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
 gi|83838350|gb|EAP77646.1| isoleucyl-tRNA synthetase [Roseovarius nubinhibens ISM]
          Length = 969

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 28/185 (15%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I   ++++        + A ++RL 
Sbjct: 623 QSVGTTGRAPYRNVVTHGFTLDEKGLKMSKSIGNTIVPQQVVD-------QYGADILRLW 675

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSALYNDLNTVS 363
           +  T Y        + L        +   T              D     A+        
Sbjct: 676 VAQTDYTADQRIGPEILKGTADSYRRLRNTVRFMLGALAHFDESDRVEAEAM------PE 729

Query: 364 A-------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQE 415
                   +  L    R+    +D   +F A      +++   + +    +   +    E
Sbjct: 730 LEQWVLHRLAELDHKVRKGYGAYDFQGVFQALFQFCTVDLSAFYFDIRKDVLYCDGDSAE 789

Query: 416 RLILL 420
           R    
Sbjct: 790 RRAAR 794


>gi|323141857|ref|ZP_08076718.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322413604|gb|EFY04462.1| leucine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 829

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 70/172 (40%), Gaps = 25/172 (14%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  +N+ +  G +  +G KMSKS GN ++  E+L         + A   RL +L      
Sbjct: 567 EPFSNL-LTQGMVIKDGAKMSKSLGNVVSPEEILS-------KYGADTARLFILFAAPPE 618

Query: 318 EPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSA----IQALHKLA 372
             ++++ Q +  +   L++ W      + ++   V    Y+  N   A     + LH   
Sbjct: 619 RELEWSDQGVEGSFRFLNRIWRIVQAFEAVLAQKVTE--YDHSNLSEADKDLRRVLHSSI 676

Query: 373 RESTKNHDLLPIFN-ASAHILGI--------EVCKEHLNKNISIAIEKLVQE 415
           ++ T + +    FN A + ++ +        E  KE     +  AI  L++ 
Sbjct: 677 KKVTNDIETRFNFNTAISTMMELVNALYAYKEAAKEPNAGLVYEAISDLIKM 728


>gi|251772855|gb|EES53414.1| Leucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 837

 Score = 47.2 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 66/204 (32%), Gaps = 30/204 (14%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E  + + +  G +  +G KMSKS G
Sbjct: 536 PVDQYIGGVEHAILHLLYSRFFTRVLYDLGLSPVQEPFSTL-LTQGMVLKDGAKMSKSKG 594

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  + L+         + A  +RL  +      + + +  + +  A   L +      
Sbjct: 595 NVVDPDHLIA-------QYGADTVRLFTLFSAPPDKDLSWDDKAVEGAYRFLGRLYGRVN 647

Query: 343 SKGIIDPAVLSALYN----DLNTVSAIQA---LHKLARESTKNHD----LLPIFNASAHI 391
           +   +      A  +    +L T  A      +H+     T + D    L     A   +
Sbjct: 648 A---LLEEFPQANNDSPGKEL-TSEATALRSKIHETIVRVTTDLDSHAQLNTAIAALMEL 703

Query: 392 LGIEVCKEHLNKNISIAIEKLVQE 415
           L      + L+         L++E
Sbjct: 704 LNALGSYQALSGEPDAVRGPLLRE 727



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 31/121 (25%), Gaps = 13/121 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R       V +              A      I  
Sbjct: 43  PYPSGRIHMGHVRNYSIGDAIARYKRMRGYN--VLHPMGWDAFGLPAENAA------ILR 94

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T  N     +   RL       +  AT   P      Q     ++  G AY  
Sbjct: 95  GIHPAEWTESNIAHMKEQLQRLGLSYDWDREVATCS-PSYYRWNQWFFLKLLEKGLAYRK 153

Query: 149 N 149
            
Sbjct: 154 E 154


>gi|229104459|ref|ZP_04235126.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678901|gb|EEL33111.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 921

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN I   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIIVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|330835309|ref|YP_004410037.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329567448|gb|AEB95553.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 939

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/99 (13%), Positives = 24/99 (24%), Gaps = 16/99 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT----------------DID 76
           P      HIG+ R  +  D++ R  R         +    T                DI 
Sbjct: 41  PYTNSPLHIGHGRTYVTADIVARYQRMIGKNVLFPFAFQFTGTPILSISEAIKRGDKDII 100

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +      + +   I        +     +   +    L 
Sbjct: 101 NDFFTLYKIDEEKIKEFQDPLKLAQYFKEDMERMARALG 139



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 16/160 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    I                + NGF+ + G+KMSKS  N   + + +E  
Sbjct: 580 SGRDLVQNHLPYMIYNHLAIFGENLVPRRIVVNGFVRVGGKKMSKSFRNIYPLYKAIE-- 637

Query: 296 KFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 +    +RLA+ + +   E  DF    +      L +    + +   +  +  + 
Sbjct: 638 -----EYGVDPVRLALTVSSELSEDTDFDTSSIKAITDQLRRMYDLAVNVSKLKSSGENG 692

Query: 355 LYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHIL 392
           L           +  +H   RE     + L    A   IL
Sbjct: 693 L------PEKWLLSLIHYKVREVNDLMNSLDFRKAFNVIL 726


>gi|325684336|gb|EGD26505.1| valine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
           20072]
          Length = 879

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ +H    + 
Sbjct: 460 GWPDEDSADFKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDE 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   ++++        + A  +R  +L  T   +   F+  ++  A  
Sbjct: 518 QGRKMSKSLGNGIDPMDVID-------KYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN 570

Query: 333 LLSKWPQTST 342
            ++K    S 
Sbjct: 571 FINKLWNASR 580


>gi|330799736|ref|XP_003287898.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
 gi|325082101|gb|EGC35595.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
          Length = 566

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 51/131 (38%), Gaps = 16/131 (12%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           YV GP      HIG+    ++ D   R  R+   +   TY    TD     ++ A ++  
Sbjct: 44  YVNGP-----PHIGHLYTALLGDAFARWNRFKGND---TYFMTGTDEHGMKVDEAAKKKG 95

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
              I D    I+++  + F     +L+ +      R T   H   +  +   ++  G+ Y
Sbjct: 96  LKTI-DYCDSISNRFKELF-----KLSEIQYDDFIRTTEPRHRDAVTAMWNRLLEKGYIY 149

Query: 147 EANNEIIFDTS 157
           +   +  + TS
Sbjct: 150 KGVYKGWYCTS 160


>gi|323697808|ref|ZP_08109720.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323457740|gb|EGB13605.1| isoleucyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 11/95 (11%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +   E+++        + A ++R+ +  ++Y+E I  + + 
Sbjct: 596 HGYVVDAEGRKMSKSIGNVLAPQEIID-------KFGAEILRMWVSASNYQEDIRISDET 648

Query: 327 LTEAEILLSKWPQT----STSKGIIDPAVLSALYN 357
           L+       +   T     ++    DPA   A+ +
Sbjct: 649 LSRLVDAYRRIRNTCRYLLSNLSDFDPADKVAVAD 683


>gi|313123426|ref|YP_004033685.1| valyl-tRNA synthetase (valine--tRNA ligase) (valrs) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
 gi|312279989|gb|ADQ60708.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           delbrueckii subsp. bulgaricus ND02]
          Length = 879

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ +H    + 
Sbjct: 460 GWPDEDSADFKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDE 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   ++++        + A  +R  +L  T   +   F+  ++  A  
Sbjct: 518 QGRKMSKSLGNGIDPMDVID-------KYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN 570

Query: 333 LLSKWPQTST 342
            ++K    S 
Sbjct: 571 FINKLWNASR 580


>gi|114777695|ref|ZP_01452655.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
 gi|114551911|gb|EAU54445.1| Isoleucyl-tRNA synthetase, class Ia [Mariprofundus ferrooxydans
           PV-1]
          Length = 936

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 43/122 (35%), Gaps = 7/122 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      ++ + +S           +  H   ++  G KM
Sbjct: 573 CVLEQREELTSPADLYLEGSDQHRGWFQSSLLESVGTRGRAPFKGVLTHGFVVDKNGNKM 632

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   +++       +   A ++RL +  + Y   I  +   + +      +  
Sbjct: 633 SKSKGNVIAPQKII-------QQMGADILRLWIASSDYSADIRISDDIIKQLSEAYRRIR 685

Query: 339 QT 340
            T
Sbjct: 686 NT 687


>gi|157164836|ref|YP_001467047.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|189082987|sp|A7ZE39|SYL_CAMC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112800438|gb|EAT97782.1| leucyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 821

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 42/92 (45%), Gaps = 9/92 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G+KMSKS GN +  ++++         + A   RL +L     +
Sbjct: 572 EPFENL-LTQGMVLKDGKKMSKSKGNVVDPDDIINR-------YGADTARLFILFAAPPQ 623

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +++    +  A   L++  + S +   ID 
Sbjct: 624 KELEWNDSAVEGAFRFLNRLWEKSQTIKKIDK 655



 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 53/187 (28%), Gaps = 33/187 (17%)

Query: 16  TEFQAID----PSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            EF+  D    P    + M+   P      H+G+ R   + D L R  R       V + 
Sbjct: 24  EEFEPKDDLSLPKKYILSMF---PYPSGRIHMGHVRNYSIGDALARSYRKSGYN--VLHP 78

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC------LAPTHQP 123
                        A +            I T +N     K+   L        +  T  P
Sbjct: 79  IGFDSFGMPAENAAIKHKIH------PKIWTYENIDYMKKELASLGFSFSKKRILATSDP 132

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS--FSRRKIDEQKMGTRVPE 181
             T    +  + I  +   G  Y  N  +         Y     +  ++++ K      +
Sbjct: 133 LYTKW--EQSFFI-KMFEKGLVYRKNAIVN-----WCEYDQTVLANEQVEDGKCWRCGND 184

Query: 182 KYHKKNP 188
              K+ P
Sbjct: 185 VVQKELP 191


>gi|325125475|gb|ADY84805.1| Valine-tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
           2038]
          Length = 879

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ +H    + 
Sbjct: 460 GWPDEDSADFKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDE 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   ++++        + A  +R  +L  T   +   F+  ++  A  
Sbjct: 518 QGRKMSKSLGNGIDPMDVID-------KYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN 570

Query: 333 LLSKWPQTST 342
            ++K    S 
Sbjct: 571 FINKLWNASR 580


>gi|283954731|ref|ZP_06372248.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793784|gb|EFC32536.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 530

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARSAVFGDTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  N---DAISIITSKNTQQFVKDTTR 113
           N   + +         +++ D  +
Sbjct: 171 NILSENVEYPDQYYKGEYIADLAK 194


>gi|134300354|ref|YP_001113850.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189082997|sp|A4J7H2|SYL_DESRM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134053054|gb|ABO51025.1| leucyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 827

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/195 (15%), Positives = 64/195 (32%), Gaps = 42/195 (21%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H       +            E   N+ +  G +  +G KMSKS GN 
Sbjct: 531 DQYIGGVEHAILHLLYSRFFTKVFYDLGLVNVQEPFENL-LTQGMVLKDGSKMSKSKGNV 589

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTSTS 343
           ++  E+++        + A   R+ +L        ++++ + +  +   L++ W    + 
Sbjct: 590 VSPEEIIDR-------YGADTARMFILFAAPPERDLEWSDRGVEGSHRFLNRVWRLVYSL 642

Query: 344 KGIIDPA-----------VLSALY-----------ND----LNTVSAIQALHKLARESTK 377
           K  +  A           V   +             D     N  +AI  + +L      
Sbjct: 643 KDEVAGAPAISSVNAYVGVHKEMRRLTHYAIKKVTEDVSGRFNFNTAISTIMELVNGIYT 702

Query: 378 NHDLLPIFNASAHIL 392
             D +        +L
Sbjct: 703 YRDKVAAVERDTAVL 717


>gi|88808557|ref|ZP_01124067.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
 gi|88787545|gb|EAR18702.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 7805]
          Length = 878

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 53/179 (29%), Gaps = 20/179 (11%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +P     Y      Y     H+G+ R  ++ DV+ R  R       V +           
Sbjct: 45  EPGQNAFYALSMFPYPSGTLHMGHVRNYVITDVIARAQRMRG--DAVLHPMGWDAFGLPA 102

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      I       I T +N +Q      RL       + +AT H        Q  
Sbjct: 103 ENAA------IERQIDPGIWTDRNIEQMKAQLDRLGLSIDWSREQATCHADYY-RWTQWL 155

Query: 138 --NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              ++  G AY+ +  +              +  ++D +    R      +KN   + L
Sbjct: 156 FLELLDQGLAYQKDATVNWDPVDQT----VLANEQVDSEGRSWRSGALVEQKNLRQWFL 210


>gi|312128513|ref|YP_003993387.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311778532|gb|ADQ08018.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 653

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 83/447 (18%), Positives = 134/447 (29%), Gaps = 126/447 (28%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+    +  D + R  R    +    +    TD   + IER  QE    P      I+
Sbjct: 20  HIGHTYCTVAADTIARYKRLRGYD---VFFLTGTDEHGQKIERKAQEVGKTPQEYVDEIV 76

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            S      +KD  +L  ++     R T   H   +  +   +   G  Y++  E  + T 
Sbjct: 77  AS------IKDLWKLMNISYDDFIRTTEDRHKKVVQKIFTKLYEQGDIYKSEYEGWYCTP 130

Query: 158 -------------SIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFILWKRSTP 199
                          P+ G    R  +E              KY +++P DFI+  +S  
Sbjct: 131 CESFWLDRQLVDGKCPDCGRPVERAREESYFFRLSKYQDALVKYIEEHP-DFIV-PQSRA 188

Query: 200 ME-------PGWE--------SPWGRGRP---------------------GWHIECSAMS 223
            E       PG E          WG   P                     G+  E  +  
Sbjct: 189 NEMINNFIKPGLEDVCVSRTTIKWGIPVPFDPKHVIYVWIDALSNYITALGYMSEDDSKF 248

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y     D+H  G +++  H     A             +   +G+L LEG KMSKS G
Sbjct: 249 KKYWPA--DVHLVGKEIVRFHTIIWPAMLMAL--GLPLPKMVFGHGWLLLEGGKMSKSKG 304

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-------THYREPIDFTVQRLT-------- 328
           N +             + +    +R  +L         H      F+   L         
Sbjct: 305 NVV-------DPVILAQKYGVDSLRYFLLREIPFGADGH------FSEDALKTRHNSDLA 351

Query: 329 -EAEILLSK-----------WPQTSTSKGIID-------PAVLSALY---NDLNTVSAIQ 366
            +   LLS+               +  K  +D         V   +    ++L   +A+ 
Sbjct: 352 NDLGNLLSRTVAMIEKYFDGIIHLTEEKEDLDNELITLAKEVYEKVCKCLDELQFSNALI 411

Query: 367 ALHKLARESTKNHDLLPIFNASAHILG 393
            + KL   + K  D          +LG
Sbjct: 412 EIWKLIARANKYID-----ETMPWVLG 433


>gi|300724587|ref|YP_003713912.1| isoleucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
 gi|297631129|emb|CBJ91818.1| isoleucine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
          Length = 937

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL +
Sbjct: 577 STAIKGKAPYRQVLTHGFTVDEQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   I  + + L  +     +   T+ 
Sbjct: 630 ASTDYTGEIAVSDEILKRSADAYRRIRNTAR 660


>gi|295677677|ref|YP_003606201.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437520|gb|ADG16690.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 863

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAQW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|198464541|ref|XP_001353264.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
 gi|198149764|gb|EAL30767.2| GA18866 [Drosophila pseudoobscura pseudoobscura]
          Length = 919

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 12/92 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  +
Sbjct: 608 SIAARDCAPYKALFVHGFTVDEKGHKMSKSLGNVISPKQI-------TKKYGTDALRWWV 660

Query: 312 LMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
                 H    I  + + L +A   LSK   T
Sbjct: 661 ASHGTQH--TSITVSDKLLQKAAENLSKVRGT 690


>gi|86610302|ref|YP_479064.1| leucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|123737942|sp|Q2JHX0|SYL_SYNJB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86558844|gb|ABD03801.1| leucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 882

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 43/159 (27%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A      I  
Sbjct: 43  PYPSGNLHMGHVRNYTITDVIARHKRMQGY--AVLHPMGWDAFGLPAENAA------IDR 94

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T +N  Q  +   RL  L+   +   T   P      Q         G AY+ 
Sbjct: 95  GIPPAKWTYQNIAQMREQLQRLG-LSYDWEREITTCAPDYYKWTQWLFLQFFKAGLAYQK 153

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D +    R      K+
Sbjct: 154 EAPVNWDPVDQT----VLANEQVDAEGRSWRSGALVEKR 188


>gi|332638500|ref|ZP_08417363.1| valyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 887

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 24/183 (13%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAM 222
           +  ++  E  +G   PE            W++ + +   W S   W     GW  E +A 
Sbjct: 425 WYHKQTGEMYVGMEAPEDIEN--------WEQDSDVLDTWFSSALWPFSTMGWPDEDAAD 476

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      + QS          N+ IH    + +GRKMSKS 
Sbjct: 477 FKRYFPTNTLV--TGYDIIFFWVARMMFQSKEFTGRRPFKNVLIHGLIRDEQGRKMSKSL 534

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP-ID--FTVQRLTEAEILLSKWPQ 339
           GN I   +++E        + A  +R  +       P +D  F+  ++  A   ++K   
Sbjct: 535 GNGIDPMDVIE-------KYGADALRWFLATGS--TPGLDVRFSYTKMDSAWNFINKIWN 585

Query: 340 TST 342
            S 
Sbjct: 586 ASR 588


>gi|308271750|emb|CBX28358.1| Methionyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 640

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 11/117 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I+ DV+ R        K    +    +  DK++  A +E      N 
Sbjct: 14  VNAKPHLGHAYTTIIADVVCRYNTMLG--KDAFLLTGTDEHGDKVVRAAEKE------NL 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
                  K ++ F      L         R T+  HI  +  ++Q I   G  Y + 
Sbjct: 66  NPKEYADKISRLFRNLWPELNIKY-NSFIRTTDPSHIEIVKQVLQKIYDSGDIYFSE 121


>gi|254509941|ref|ZP_05122008.1| isoleucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533652|gb|EEE36640.1| isoleucyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 972

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 56/182 (30%), Gaps = 22/182 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   +++E        + A ++RL 
Sbjct: 626 QACGTKGRAPYRNVVTHGFTLDAKGNKMSKSLGNTIVPEKVVE-------QYGADILRLW 678

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSA-- 364
           +  T Y        + L        +   T      S      A   A  +         
Sbjct: 679 VAQTDYTADQRIGPEILKGTADSYRRLRNTMRFMLGSLADFTEADRVAPED---MPRLER 735

Query: 365 -----IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLI 418
                +  L +  R      D   +F+A      +++   + +    +   +     R  
Sbjct: 736 WVLSRLADLDEQVRRGYAAFDFQGVFSAVFTFATVDLSSFYFDVRKDVLYCDGDSDRRRA 795

Query: 419 LL 420
             
Sbjct: 796 AR 797


>gi|58698674|ref|ZP_00373565.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630227|ref|YP_002727018.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|58534805|gb|EAL58913.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592208|gb|ACN95227.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 548

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 53/161 (32%), Gaps = 14/161 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV+ R ++     K V +     +   KI + A+ +        
Sbjct: 16  VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFTTGTDEHGQKIEKAAKAKEMQ----- 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T   +  F +   +          R T   H   +I L   +   G  Y  +   
Sbjct: 69  -PKEFTDDVSVSFKE-LAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSYSG 126

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +       Y      ++ + K  T    ++ K+    F L
Sbjct: 127 WYSVRDEAFYQE---SELIDGKAPTGAEVQWIKEESYFFRL 164


>gi|317051073|ref|YP_004112189.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946157|gb|ADU65633.1| leucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 822

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 60/193 (31%), Gaps = 44/193 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H                    E    + +  G + L G+KMSKS GN 
Sbjct: 529 DQYIGGVEHAVMHLLYARFFHKALRDLGYVGSDEPFTRL-LTQGMVLLGGKKMSKSLGNI 587

Query: 286 ITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           +  +E++       + + A  +RL  +  +   + +++    +  A   L +  +     
Sbjct: 588 VDPDEMI-------QRYGADTVRLFTLFASPPEKDLEWNESGVEGAFRFLGRLWRLVHED 640

Query: 345 GIIDPAVLSA---LYND------------------------LNTVSAIQALHKLARESTK 377
                    +   L +D                         NT  AI A  +L  E T 
Sbjct: 641 TTRYGRSAESPGELSDDARKLQQKLHQTIKRVTQNMEGHYHFNT--AIAATMELVNEMTP 698

Query: 378 NHDLLPIFNASAH 390
             D  P   A   
Sbjct: 699 FSDTSPSGKALFQ 711



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 41/159 (25%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  +       V +              A         
Sbjct: 44  PYPSGRIHMGHVRNYAIGDAIARYKKMRGYN--VLHPMGWDAFGLPAENAAIAH------ 95

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYLIQNIILHGHAYEA 148
           N      T  N     +   +L       +  AT        +    I+ +   G  Y  
Sbjct: 96  NMDPGEWTWSNIAYMKQQLQKLGFSYDWERELATCSEEYAAFEQQLFIE-LYKKGLIYRK 154

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             E+   D          +  +++E +      E   K+
Sbjct: 155 KAEVNWCDHCKT----VLANEQVEEGRCWRDGSEVLKKE 189


>gi|159044481|ref|YP_001533275.1| isoleucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|157912241|gb|ABV93674.1| isoleucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 991

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   +++       + + A ++RL 
Sbjct: 644 QACGTMGRAPYRGVLTHGFTLDAKGNKMSKSVGNTVAPEKVV-------QQYGADILRLW 696

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
           +  + Y   +    + L        +   T         A   A
Sbjct: 697 VAQSDYTVDLRIGDEILKNVADSYRRLRNTMRYLLGALSAFEEA 740


>gi|315924529|ref|ZP_07920748.1| leucine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622059|gb|EFV02021.1| leucine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 803

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 51/136 (37%), Gaps = 10/136 (7%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E  A        L  +G KMSKS GN +  N+++         + A  +R   M +  Y
Sbjct: 562 KEPYAKRTAQGLILGSDGEKMSKSKGNVVNPNDIIA-------EYGADTLRTYIMFIGDY 614

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQALHKLARES 375
            +P  ++   +      L +  +        D      L ND++ T+  +   ++  + +
Sbjct: 615 EKPAPWSDNGIKGCRRFLDRVWKLQDMVVEGD-TFSKELENDMHKTIKRVSEDYEAMKFN 673

Query: 376 TKNHDLLPIFNASAHI 391
           T    L+ + N    +
Sbjct: 674 TAIAALMSLLNHFNRV 689


>gi|312135070|ref|YP_004002408.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775121|gb|ADQ04608.1| leucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 817

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  +++E        + A   RL +L        ++++ Q +      L++  +   
Sbjct: 585 NIVSPEDIIE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 343 SKGIIDPAVLSALYND 358
                   + + L +D
Sbjct: 638 -------ELKNKLADD 646


>gi|255994163|ref|ZP_05427298.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993831|gb|EEU03920.1| leucine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 817

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 51/143 (35%), Gaps = 37/143 (25%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +   G KMSKS GN +  +++++T       + A   RL +L        ++++ 
Sbjct: 565 LTQGMVLKNGTKMSKSIGNIVEPSDIIKT-------YGADTARLFVLFQAPPERDLEWSD 617

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALY----ND---------------------- 358
           + +  +   L++  + +     +    L  L     +D                      
Sbjct: 618 EGVVGSFKFLNRVYRLALEYKDVKDVSLEELSASCEDDKKLISKIHMTIKKVDSDLDKHF 677

Query: 359 -LNTVSAIQALHKLARESTKNHD 380
             NT  AI A+ +L     K  +
Sbjct: 678 GFNT--AISAVMELVNMIYKYKE 698


>gi|209517543|ref|ZP_03266383.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502076|gb|EEA02092.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 863

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAQW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|195478617|ref|XP_002086516.1| GE23171 [Drosophila yakuba]
 gi|194186306|gb|EDW99917.1| GE23171 [Drosophila yakuba]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  
Sbjct: 600 MSIAARECSPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGTDALRWW 652

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   LSK   T
Sbjct: 653 VASHGTQHM--SITVSDKLLQQAAENLSKVRGT 683


>gi|195495398|ref|XP_002095250.1| GE22294 [Drosophila yakuba]
 gi|194181351|gb|EDW94962.1| GE22294 [Drosophila yakuba]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  
Sbjct: 600 MSIAARECSPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGTDALRWW 652

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   LSK   T
Sbjct: 653 VASHGTQHM--SITVSDKLLQQAAENLSKVRGT 683


>gi|89895904|ref|YP_519391.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|219670334|ref|YP_002460769.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|122997225|sp|Q24SP5|SYL_DESHY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782494|sp|B8FUR3|SYL_DESHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89335352|dbj|BAE84947.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540594|gb|ACL22333.1| leucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 827

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 73/208 (35%), Gaps = 46/208 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H       +            E  AN+ +  G + L G KMSKS GN 
Sbjct: 533 DQYVGGVEHAILHLLYSRFFTKALRDFGYLKVDEPFANL-LTQGMVCLGGAKMSKSKGNV 591

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           ++  E++         + A   RL +L        +++  Q +      L++  + +   
Sbjct: 592 VSPEEIIS-------KYGADTARLFILFAAPPERDLEWNDQGVEGCYRFLNRVWRLAAQY 644

Query: 345 GIIDPAVLSALYNDLNTVSAIQ----ALHKLARESTK---------NHDLLPIFN---AS 388
             +           L T  A       L K A++  +           D+   FN   A 
Sbjct: 645 EEV-----------LKTTGAGANEFGELDKAAKDMRRQTHQTIQRVTSDVGARFNFNTAV 693

Query: 389 AHILGIEVC----KEHLNKNISIAIEKL 412
           + I+ +       KE    N+++A E L
Sbjct: 694 SAIMELVNALYLYKEQPQVNLAVAREAL 721


>gi|326434299|gb|EGD79869.1| leucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 991

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 6/71 (8%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N +A     D        +  NG L L G KMSKS GNF
Sbjct: 577 PLDMRVSGKDLIPNHLTYCLYNHVAIWE--DNKAMWPRSFRANGHLMLNGAKMSKSTGNF 634

Query: 286 ITINELLETKK 296
           +T+ + +E   
Sbjct: 635 MTLEQCIEKYG 645


>gi|315126084|ref|YP_004068087.1| isoleucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315014598|gb|ADT67936.1| isoleucyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 942

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/205 (16%), Positives = 69/205 (33%), Gaps = 19/205 (9%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   L    D++  G D       + +  S   +       +  H   ++  GRKM
Sbjct: 550 CVVDAREDLVGPADLYLEGSDQHRGWFMSSMMTSVAINGHAPYKQVLTHGFTVDENGRKM 609

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I+   ++           A ++RL +  T Y   +  + +    +     +  
Sbjct: 610 SKSLGNVISPQNVMNKLG-------ADILRLWVASTDYTAEMTVSDEIFKRSADRYRRIR 662

Query: 339 QTS----TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNASAHIL 392
            TS     +    DP       +D      +  L K    R +    D+L  +++   +L
Sbjct: 663 NTSRYLLANLSGFDPKTDQVAVDD------MVELDKWIVGRAAQLQDDILAAYDSYQMLL 716

Query: 393 GIEVCKEHLNKNISIAIEKLVQERL 417
             +         +      ++++R 
Sbjct: 717 VTQKLMNFCTGELGSFYLDVIKDRQ 741


>gi|294494856|ref|YP_003541349.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665855|gb|ADE35704.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 680

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 44/134 (32%), Gaps = 15/134 (11%)

Query: 18  FQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
           F    P  +    CG P     AHIG+ R  I  D+  R L+    E  VT+V       
Sbjct: 4   FSPDKPILV---TCGLPYANGMAHIGHLRTYIPADIFVRSLKKMGHE--VTFVCGSDTHG 58

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIY 134
             I+  A ++      N     +  K    F +    +             TNH      
Sbjct: 59  TPIVFNAEEQ------NTTPQALIKKYHSHFDETFKSMGIEFDAFGTTDDPTNHNRTH-D 111

Query: 135 LIQNIILHGHAYEA 148
           ++  +I + + Y  
Sbjct: 112 IVNRLIENDYVYPK 125


>gi|219850836|ref|YP_002465268.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545095|gb|ACL15545.1| isoleucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 1060

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S CA        + +H   L+ + +KMSKS GN IT  E++         +   V+R  +
Sbjct: 567 STCAFDKAPYKRVLMHGFALDADSKKMSKSLGNMITPEEVVA-------KYGVDVLRFYV 619

Query: 312 LMTHYREPID---FTVQRLTEAEILLS 335
           L  +   P D   F    +      ++
Sbjct: 620 LSAN--APWDDLKFNWDGVKTVHRTIN 644


>gi|254454638|ref|ZP_05068075.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198269044|gb|EDY93314.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 976

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 54/163 (33%), Gaps = 21/163 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q C          +  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 631 QGCGTIGRAPYRGVLTHGFTLDEKGMKMSKSIGNTIVPEKIV-------QQYGADILRLW 683

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--- 363
           +    +        + L        +   T      S G  + ++  A  +         
Sbjct: 684 VAQVDFTNDQRIGDEILKGVADSYRRLRNTVRYMLGSLGDFEASMAVARDD---MPELEQ 740

Query: 364 ----AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                +  L  + RE    +D   +F A      +++   + +
Sbjct: 741 LILHKLAVLDGVVREGYAKYDFQGVFRAIFDFATLDLSAFYFD 783


>gi|46908248|ref|YP_014637.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226224616|ref|YP_002758723.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254825490|ref|ZP_05230491.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254854377|ref|ZP_05243725.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931813|ref|ZP_05265172.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|254993251|ref|ZP_05275441.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|255521953|ref|ZP_05389190.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300763676|ref|ZP_07073673.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81403188|sp|Q71Y01|SYI_LISMF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|259511508|sp|C1KWW3|SYI_LISMC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|46881519|gb|AAT04814.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225877078|emb|CAS05789.1| isoleucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|258607776|gb|EEW20384.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583367|gb|EFF95399.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293594732|gb|EFG02493.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300515412|gb|EFK42462.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328466360|gb|EGF37517.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 1816]
 gi|332312452|gb|EGJ25547.1| Isoleucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 921

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 31/147 (21%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLN-TVSAIQA-- 367
               Y+  +  + + L +   +  K   T     G I         ND N T +A+    
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNI---------NDFNPTTNAVSYEN 671

Query: 368 -----------LHKLARESTKNHDLLP 383
                      L+ L +    N++   
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDNYEAFE 698


>gi|195019854|ref|XP_001985069.1| GH16853 [Drosophila grimshawi]
 gi|193898551|gb|EDV97417.1| GH16853 [Drosophila grimshawi]
          Length = 949

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +++H   ++ +G KMSKS GN I+  ++        + +   V+R  +
Sbjct: 607 SIAARNCAPYKALFVHGFTVDEKGHKMSKSVGNVISPKQI-------TKKYGTDVLRWWV 659

Query: 312 LMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
                 H    I  + + L +A   LSK   T
Sbjct: 660 ASHGTQHM--SITVSDKLLQQAADNLSKVRGT 689


>gi|47093189|ref|ZP_00230963.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|47018440|gb|EAL09199.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
          Length = 921

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 53/147 (36%), Gaps = 31/147 (21%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLN-TVSAIQA-- 367
               Y+  +  + + L +   +  K   T     G I         ND N T +A+    
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNTMRFLLGNI---------NDFNPTTNAVSYEN 671

Query: 368 -----------LHKLARESTKNHDLLP 383
                      L+ L +    N++   
Sbjct: 672 LREVDKYMLIKLNDLVKNVKDNYEAFE 698


>gi|257792394|ref|YP_003183000.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
 gi|257476291|gb|ACV56611.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
          Length = 529

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 41/143 (28%), Gaps = 11/143 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I  D + R  R    +     V  +T +D+   + A           
Sbjct: 15  VNAAPHLGTAYTTIAADTVARYQRMNGYD-----VAFVTGMDEHGQKVADTAA---DKGM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                       F      L     T   R T   H   +    Q++   G  Y+ + E 
Sbjct: 67  TPQDWCDSMEPAFRDAWDMLGITY-TDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSYEG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKM 175
            +       Y      K DE ++
Sbjct: 126 WYCVHEETYYAESDLEKNDEGEL 148


>gi|255659377|ref|ZP_05404786.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848463|gb|EEX68470.1| leucine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 826

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 15/114 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 530 PVDQYIGGIEHAILHLLYSRFFTKVLHDAGLVDFDEPFTNL-LTQGMVLKDGSKMSKSKG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK 336
           N ++  E++         + A   RL +L        ++++ Q +  +   L++
Sbjct: 589 NVVSPEEIIA-------KYGADTARLFILFAAPVDRDLEWSDQGVEGSYRFLNR 635


>gi|225677328|ref|ZP_03788304.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225590629|gb|EEH11880.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 541

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 54/161 (33%), Gaps = 14/161 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV+ R ++     K V +     +   KI + A+ +        
Sbjct: 16  VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFTTGTDEHGQKIEKAAKAKEMQ----- 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + +  F +   +          R T   H   +I L   +   G  Y  +   
Sbjct: 69  -PKEFTDEVSVSFKE-LAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSYSG 126

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +       Y      ++ + K  T    ++ K+    F L
Sbjct: 127 WYSVRDEAFYQE---SELIDGKAPTGAEVQWIKEESYFFRL 164


>gi|99034647|ref|ZP_01314595.1| hypothetical protein Wendoof_01000592 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 471

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 16/167 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV+ R ++     K V +     +   KI + A+ +        
Sbjct: 16  VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFTTGTDEHGQKIEKAAKAKEMQ----- 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T + +  F +   +          R T   H   +I L   +   G  Y  +   
Sbjct: 69  -PKEFTDEVSVSFKE-LAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSYSG 126

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRS 197
            +       Y      ++ + K  T    ++ K+    F L  W+  
Sbjct: 127 WYSVRDEAFYQE---SELIDGKAPTGAEVQWIKEESYFFRLSNWQEK 170


>gi|91202480|emb|CAJ72119.1| strongly similar to methionyl-tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 520

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 19/170 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG++   I  DVL R  R    +  V ++    +   KI + A         N 
Sbjct: 15  VNDIPHIGHSYTTIAADVLARYRRLQ--QYDVFFLTGSDEHGQKIQKAAEAC------NK 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
             +        +F      L         R T+  H+ ++  + Q +  +G  Y  E   
Sbjct: 67  TPNDFVDMVVGKFKDLWENLNISNDDF-IRTTDERHVKRVKKIFQKLFENGDIYLGEYEG 125

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTP 199
                  S      ++  ++DE +    R   +  K+    F L K   P
Sbjct: 126 RYCVPCESF-----WTETQLDEGRCPECRRNVEKVKEKNYFFRLSKYQKP 170


>gi|158604929|gb|ABW74748.1| methionyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 644

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 61/352 (17%), Positives = 101/352 (28%), Gaps = 78/352 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D L R  R    E   TY    TD         + E  +     
Sbjct: 14  VNDVPHIGHAYTTIIADTLARFNRLQGKE---TYFMTGTD-----EHGQKIEQAARARGK 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F             H  R T   H   +  + + + ++G  Y+   E 
Sbjct: 66  TPKEYADEISAKFRSLWDEFEISY-DHFIRTTDEEHKQTVQNVFEKMQVNGDIYKGEYEG 124

Query: 153 IFDTS--SIPNYGSF--SRRKIDEQKMGTRVPEKYH--KKNPADFIL--W---------- 194
            +  S  +  N        R  D  ++ + V E+ +  K +  +  L  W          
Sbjct: 125 FYCVSCETFFNQRDLLEDNRCPDCGRVTSLVKEESYFFKLSKYEDALLKWYENDELCVIP 184

Query: 195 KRSTPMEPGW-------------ESPWGRGRPGWHIECSAMSSHY--------LGKVFDI 233
           K        +                WG   P      SA    +        L      
Sbjct: 185 KGKKNEVVSFVKGGLKDLSVTRTSFDWGIKLPK-----SANDDKHVMYVWLDALINYLTT 239

Query: 234 HGGGLDLI----FPHHENEIAQSCCADRIEKTANIWIHNG-----FLNLEGR------KM 278
            G   D      +PH  + + +              +  G      +   G       KM
Sbjct: 240 LGYSRDNARMDFWPHTTHIVGKDILRFHAVYWPAFLMSLGLPLPKHVAAHGWWTIDGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           SKS GN I   E+         ++     R  +L    + +  D++ + L E
Sbjct: 300 SKSKGNVINPREV-------ANAYGLENFRYFLLREVPFGQDGDYSQKALIE 344


>gi|121535254|ref|ZP_01667068.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121306139|gb|EAX47067.1| isoleucyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 930

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +  +        +  H   ++ EGRKMSKS GN I   E++       + + A ++RL +
Sbjct: 575 AVASRGRAPYKTVLTHGFVVDGEGRKMSKSIGNVIYPQEVI-------KQYGADILRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  I  +   L +   +  K   T
Sbjct: 628 ASADYKADIRISNDILKQMAEVYRKIRNT 656



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 11/136 (8%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDKIIERAR 84
           GP  Y     HIG A   I+ D++ +       +        T+   I     KI+   R
Sbjct: 55  GP-PYANGNIHIGTALNKILKDIIVKYKSLRGYDAPYVPGWDTHGLPIEHAAIKILGLNR 113

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
            E   + +         K      +D  RL        P  T    +  + I +   +  
Sbjct: 114 HELNPLDLRRQCKEYALKCLDMQREDFKRLGVSGDWDNPYITLTPEYEAKQIEVFGEMAK 173

Query: 142 HGHAYEANNEIIFDTS 157
            G+ Y+    + + TS
Sbjct: 174 KGYIYKGLKSVYWCTS 189


>gi|50290861|ref|XP_447863.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527174|emb|CAG60812.1| unnamed protein product [Candida glabrata]
          Length = 1093

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 49/146 (33%), Gaps = 31/146 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 684 PLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNAKMSKSTGNFMTLE 743

Query: 290 EL-------------------LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ++                   +E       +  A ++RL  L        +++ + + + 
Sbjct: 744 QIVEKFGADASRIALADAGDTVEDANLDESNANAAILRLFNLK-------EWSEEIVKDI 796

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALY 356
           + L     ++     I D A    + 
Sbjct: 797 DTL-----RSGEITEIFDVAFEHEMN 817


>gi|260459472|ref|ZP_05807727.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259035026|gb|EEW36282.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 517

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D L R  R     K V ++    +   K+++ A++E        +   
Sbjct: 19  PHIGHAYEVIATDALARFQRLDG--KQVFFLTGTDEHGIKMLQTAKRE------GISARE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L         R T   H      + + +  +G  Y+      +  
Sbjct: 71  LADRNSADFKRMAAALNASNDDF-IRTTEERHYASSQAIWKAMDANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137


>gi|229007086|ref|ZP_04164712.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754131|gb|EEM03550.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 802

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDASNQELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|120613181|ref|YP_972859.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|166230603|sp|A1TVU7|SYL_ACIAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120591645|gb|ABM35085.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 897

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 41/143 (28%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D    + Y C    Y     H+G+ R   + D+L R LR       +          
Sbjct: 26  VTEDAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGW------ 79

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D     A  E+ ++      +  T  N     K    +  LA           P      
Sbjct: 80  DAFGLPA--ENAALKNGVPPAQWTYDNIAYMKKQMQAMG-LAIDWSREVATCDPDYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLEKGIAYRKTQVVNWD 159


>gi|325833648|ref|ZP_08166097.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
 gi|325485572|gb|EGC88041.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
          Length = 529

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 41/143 (28%), Gaps = 11/143 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I  D + R  R    +     V  +T +D+   + A           
Sbjct: 15  VNAAPHLGTAYTTIAADTVARYQRMNGYD-----VAFVTGMDEHGQKVADTAA---DKGM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                       F      L     T   R T   H   +    Q++   G  Y+ + E 
Sbjct: 67  TPQDWCDSMEPAFRDAWDMLGITY-TDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSYEG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKM 175
            +       Y      K DE ++
Sbjct: 126 WYCVHEETYYAESDLEKNDEGEL 148


>gi|312876049|ref|ZP_07736038.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797247|gb|EFR13587.1| leucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 817

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 38/174 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW----- 337
           N ++  +++E        + A   RL +L        ++++ Q +      L++      
Sbjct: 585 NIVSPEDIVE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 338 -------PQTSTSKGIIDPAVLSALY-------ND----LNTVSAIQALHKLAR 373
                   ++   +  +D  +   L         D     N  +AI  + +L  
Sbjct: 638 ELKSKLADESLLGESELDDELKYRLNYTIKKVTEDIGERFNFNTAISTIMELLN 691


>gi|228999529|ref|ZP_04159107.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760240|gb|EEM09208.1| Leucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 802

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDASNQELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|20094286|ref|NP_614133.1| methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|25009365|sp|Q8TX28|SYM_METKA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19887329|gb|AAM02063.1| Methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 668

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 35/121 (28%), Gaps = 18/121 (14%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      HIG+ R   +  DV  R L+         ++    +    I  +A  E 
Sbjct: 12  YTNGP-----LHIGHVRSTYLPADVYTRFLKMRG--IDAIHIGGTDNHGVPIALQAELE- 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHG 143
                      I  K  +   +D  RL               P  + + Q     +   G
Sbjct: 64  -----GKDPEEIVEKYHEMIKEDLERLNIHFDEFSCTCREFNPDHVDMTQWFFKRLYEAG 118

Query: 144 H 144
           +
Sbjct: 119 Y 119


>gi|238786671|ref|ZP_04630472.1| Isoleucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238725039|gb|EEQ16678.1| Isoleucyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPA 672


>gi|315638909|ref|ZP_07894081.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315481127|gb|EFU71759.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 530

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 3/82 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-DIDDKIIERARQEHPSIP 91
           PT     HIG+AR  I  D L R+ R+   +    Y  N   +  D +      +   + 
Sbjct: 115 PT--GPLHIGHARGAIFGDTLARVARHLGYKFDTEYYVNDAGNQIDLLGLSVLSKVKILC 172

Query: 92  INDAISIITSKNTQQFVKDTTR 113
           +N+ +    +    +++ D  R
Sbjct: 173 LNEELEYPENAYKGEYIDDLAR 194


>gi|212526158|ref|XP_002143236.1| isoleucyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210072634|gb|EEA26721.1| isoleucyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 1001

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 50/250 (20%), Positives = 82/250 (32%), Gaps = 52/250 (20%)

Query: 194 WKRSTPMEPGW-------ESPWGRGRPG-----WHIECSA---MSSHYLGK--VFDIHGG 236
           W   +P +P W       E+  G  R       W    ++   +    LGK    DI+  
Sbjct: 519 WWTDSPEDPAWIPHHLQQENSPGYRRGTDTMDVWFDSGTSWTQVEDKSLGKERPADIYLE 578

Query: 237 GLD----------LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G D          L +  H+        +       ++  H   L+ + RKMSKS GN I
Sbjct: 579 GTDQHRGWFQSSLLTYVSHQVASGTVESSTIKAPFKHLITHGFTLDQDARKMSKSIGNVI 638

Query: 287 TINELL----------------ETKKFGGRSWP---APVIRLAMLMTHYREPIDFTVQRL 327
             + ++                + +K  G  +       +RL +  + Y   +    Q L
Sbjct: 639 QPDAIMNGTLLPPLKQKKSKSAKEQKASGPVYDALGPDALRLWVASSDYTRDVVIGQQVL 698

Query: 328 TEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHDL 381
                 L K+  T      + G  DP V    Y DL+ +   A+  L +L        D 
Sbjct: 699 QTVNTSLHKFRVTFKLLLGALGDFDPKVNMRQYEDLHKIDRQALMQLTRLVDTCRNAFDN 758

Query: 382 LPIFNASAHI 391
              + A   +
Sbjct: 759 FEFYKAVNAL 768


>gi|83589432|ref|YP_429441.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|123725764|sp|Q2RKZ1|SYL_MOOTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83572346|gb|ABC18898.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 829

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 64/197 (32%), Gaps = 44/197 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H       +            E   N+ +  G +  +G KMSKS GN 
Sbjct: 532 DQYIGGVEHAILHLMYARFFTKALHDFGLVGVEEPFQNL-LTQGMVLKDGSKMSKSKGNI 590

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           ++  E++         + A   RL +L        ++++ Q +      L++  +   S 
Sbjct: 591 VSPEEIINR-------YGADTARLFILFAAPPERDLEWSDQGVEGCYRFLNRVWRLVGSY 643

Query: 345 GI---------------------IDPAVLSALYND----LNTVSAIQALHKLARESTKNH 379
                                  +  A +  +  D     N  +AI A+ +L     +  
Sbjct: 644 ADAVRRAGGSLEIRSHADRELWRLLHATIKKVTEDVEERFNFNTAISAIMELVNGCYRYQ 703

Query: 380 DLLPI----FNASAHIL 392
           D +P           +L
Sbjct: 704 DTVPEEEQNLVLMGEVL 720



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 38/140 (27%), Gaps = 15/140 (10%)

Query: 19  QAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              DP   + Y     P      H+G+ R   + DV+ R+ R       V +        
Sbjct: 26  VTEDPDKPKFYCLEMFPYPSGNLHMGHVRNYSIGDVVARVKRMRGYN--VLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T  N     +    +       +  AT H P      
Sbjct: 84  LPAENAA------IHRGIPPAEWTWSNIANMRRQLHAMGISYDWDREVATCH-PNYYRWT 136

Query: 137 Q----NIILHGHAYEANNEI 152
           Q     +  HG AY     +
Sbjct: 137 QWLFLQMYKHGLAYRKKAAV 156


>gi|332160245|ref|YP_004296822.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318607185|emb|CBY28683.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325664475|gb|ADZ41119.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863046|emb|CBX73178.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLS 353
           +  T Y   I  + + L  +     +   T+     +    DPA+  
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPALHQ 675


>gi|261856331|ref|YP_003263614.1| leucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836800|gb|ACX96567.1| leucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 818

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 17/141 (12%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML- 312
             D+ E    + +  G +N +G KMSKS GN +    L+E        + A  +RL M+ 
Sbjct: 554 AKDKPEPFTRL-LTQGMVNKDGSKMSKSKGNTVDPQPLIE-------EYGADTVRLFMMF 605

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA---VLSALYNDLNTVSAI-QA 367
                + ++++   +  A   L + W Q    K         ++  L +      A+ + 
Sbjct: 606 AAPPDQGLEWSDAGVDGAHRFLKRLWRQVYDRKQAGWQPSTLLIEGLDD---AGRALRRK 662

Query: 368 LHKLARESTKNHDLLPIFNAS 388
           LH+     T + +    FN  
Sbjct: 663 LHETIARVTDDVEKRQTFNTV 683



 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 44/140 (31%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 30  DPTREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRG--KNVLQPMGWDAFGLPA 87

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +   DA +  T +N         RL       +  AT   P+     Q  
Sbjct: 88  ENAA------LKNGDAPARWTFENIDYMRGQLQRLGLAYDWQRELAT-CTPEYYRWEQWL 140

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY+    + +D
Sbjct: 141 FTRLVRKGMAYKKTAVVNWD 160


>gi|254283799|ref|ZP_04958767.1| isoleucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219680002|gb|EED36351.1| isoleucyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 933

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 17/123 (13%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        +  H   ++ EGRKMSKS GN +   + +           A +IRL +  
Sbjct: 575 AAYGEAPYRQVLTHGFTVDGEGRKMSKSLGNILPARKAMNDLG-------ADIIRLWVAA 627

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQALH 369
             YR  +  + +          +   T+    ++    DPA       DL    A+  L 
Sbjct: 628 ADYRGDLAVSDEIFKRTADAYRRIRNTARFLLSNLVGFDPAS------DLVAPEALLPLD 681

Query: 370 KLA 372
           +  
Sbjct: 682 RWI 684


>gi|254516563|ref|ZP_05128622.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
 gi|219674986|gb|EED31353.1| leucyl-tRNA synthetase [gamma proteobacterium NOR5-3]
          Length = 822

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 38/160 (23%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    + +  G +  +G KMSKS GN +    L+++         A  +RL  +      
Sbjct: 564 EPFTRL-LTQGMVLKDGAKMSKSKGNTVDPQSLIDSHG-------ADTVRLFSLFAAPPD 615

Query: 318 EPIDFTVQRLTEAEILLSKWPQTS--------------TSKGIIDPAV-------LSALY 356
           + ++++   +  A   + +  + +               + G  +  V       ++ + 
Sbjct: 616 QSLEWSEDGVEGAHRFVKRLWRLAHEHTDKGPAPGLDTGALGDAERDVRRKIHETIAKVS 675

Query: 357 ND------LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           +D       NT  AI A+ +L  E  +     P   A   
Sbjct: 676 DDMGRRQTFNT--AIAAIMELCNELGRLPGDSPQSRAVLQ 713


>gi|294678720|ref|YP_003579335.1| isoleucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294477540|gb|ADE86928.1| isoleucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 983

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   +++       + + A ++RL 
Sbjct: 636 QACATKGRAPYRGVLTHGFTLDEKGMKMSKSLGNTVAPADVI-------KDYGADILRLW 688

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  + Y   +    + L        +   T
Sbjct: 689 VAQSDYTVDLRIGKEILKGTADSYRRLRNT 718


>gi|257053981|ref|YP_003131814.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692744|gb|ACV13081.1| leucyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 898

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 28/177 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEI--AQSCCADR---IEKTANIWIHNGFLNLEGRKMSKSNGN 284
             D++ GG +    H       A            +     ++ G +   G KMS + GN
Sbjct: 537 PVDVYVGGEEHAVLHLLYIRFFAHVLADLGLLDEPEPVQRLVNQGTVLHGGEKMSTAKGN 596

Query: 285 FITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
            IT +E           +     RL +L   H R+  ++T + ++ A  L  +      +
Sbjct: 597 VITPHE-----------YGPETTRLFVLGAAHPRQDFEWTAKDVSSAYDLQQQLYDMVRA 645

Query: 344 KGIIDP--AVLSALYNDLN-----TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
               D   +      + L+     T++A          + + H  +    + A +LG
Sbjct: 646 FTEADAGRSEREPRDDYLDREIDRTIAATTEEFD----AFRFHRAISEIRSLAGVLG 698



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 23/89 (25%), Gaps = 10/89 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           YV G   Y     H+G+ R   + D   R  R    E  V                A ++
Sbjct: 37  YVLGMFPYTSGNLHMGHVRNYAITDAYARYRRMCGDE--VLQPMGWDAFGLPAENAAERQ 94

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLA 115
                        T    +   ++   + 
Sbjct: 95  L------SDPQSWTDTCIEDMREEMEAMG 117


>gi|308802504|ref|XP_003078565.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
 gi|116057018|emb|CAL51445.1| isoleucyl-tRNA synthetase (ISS) [Ostreococcus tauri]
          Length = 1011

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 40/110 (36%), Gaps = 14/110 (12%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRLAML 312
           A        I  H   L+ +G KMSKS GN I    ++E  K   +   + A  +RL + 
Sbjct: 629 AMGQAPYKTILTHGFVLDEKGYKMSKSLGNVIDPRTVIEGGKNQKQEPGYGADTLRLWVA 688

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY--NDLN 360
            T Y   +   +  + +      K   T          +  A+   +D N
Sbjct: 689 STDYSGDVSIGMNIIKQTSEAYRKLRGT----------IRFAMGVLDDFN 728


>gi|153946992|ref|YP_001402415.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
 gi|166980060|sp|A7FMD7|SYI_YERP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|152958487|gb|ABS45948.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPA 672


>gi|22127574|ref|NP_670997.1| isoleucyl-tRNA synthetase [Yersinia pestis KIM 10]
 gi|45443437|ref|NP_994976.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594968|ref|YP_069159.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108810058|ref|YP_653974.1| isoleucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|108810512|ref|YP_646279.1| isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|145600412|ref|YP_001164488.1| isoleucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|150260489|ref|ZP_01917217.1| isoleucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162418737|ref|YP_001605365.1| isoleucyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165927280|ref|ZP_02223112.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937786|ref|ZP_02226347.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|166008941|ref|ZP_02229839.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166211935|ref|ZP_02237970.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167401654|ref|ZP_02307148.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167418708|ref|ZP_02310461.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167426059|ref|ZP_02317812.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167469838|ref|ZP_02334542.1| isoleucyl-tRNA synthetase [Yersinia pestis FV-1]
 gi|170025803|ref|YP_001722308.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186893970|ref|YP_001871082.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|218927672|ref|YP_002345547.1| isoleucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|229836943|ref|ZP_04457108.1| isoleucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|229840362|ref|ZP_04460521.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842442|ref|ZP_04462597.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229900701|ref|ZP_04515825.1| isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|270487931|ref|ZP_06205005.1| isoleucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294502571|ref|YP_003566633.1| isoleucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|81594653|sp|Q8ZIM0|SYI_YERPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81640431|sp|Q66ES4|SYI_YERPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122980348|sp|Q1CMV1|SYI_YERPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123371958|sp|Q1C0J3|SYI_YERPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166229781|sp|A4TQF3|SYI_YERPP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782458|sp|B2K3M6|SYI_YERPB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782459|sp|A9R008|SYI_YERPG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782460|sp|B1JKZ8|SYI_YERPY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21960680|gb|AAM87248.1|AE013973_7 isoleucine tRNA synthetase [Yersinia pestis KIM 10]
 gi|45438306|gb|AAS63853.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
           91001]
 gi|51588250|emb|CAH19857.1| isoleucine tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
 gi|108774160|gb|ABG16679.1| Isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|108781971|gb|ABG16029.1| Isoleucyl-tRNA synthetase [Yersinia pestis Antiqua]
 gi|115346283|emb|CAL19154.1| isoleucyl-tRNA synthetase [Yersinia pestis CO92]
 gi|145212108|gb|ABP41515.1| Isoleucyl-tRNA synthetase [Yersinia pestis Pestoides F]
 gi|149289897|gb|EDM39974.1| isoleucyl-tRNA synthetase [Yersinia pestis CA88-4125]
 gi|162351552|gb|ABX85500.1| isoleucyl-tRNA synthetase [Yersinia pestis Angola]
 gi|165914198|gb|EDR32814.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           IP275]
 gi|165920742|gb|EDR37990.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165992280|gb|EDR44581.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206681|gb|EDR51161.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166962702|gb|EDR58723.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167049036|gb|EDR60444.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167054982|gb|EDR64782.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|169752337|gb|ACA69855.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
 gi|186696996|gb|ACC87625.1| isoleucyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
 gi|229682040|gb|EEO78132.1| isoleucyl-tRNA synthetase [Yersinia pestis Nepal516]
 gi|229690752|gb|EEO82806.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696728|gb|EEO86775.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229705886|gb|EEO91895.1| isoleucyl-tRNA synthetase [Yersinia pestis Pestoides A]
 gi|262360601|gb|ACY57322.1| isoleucyl-tRNA synthetase [Yersinia pestis D106004]
 gi|262364547|gb|ACY61104.1| isoleucyl-tRNA synthetase [Yersinia pestis D182038]
 gi|270336435|gb|EFA47212.1| isoleucine--tRNA ligase [Yersinia pestis KIM D27]
 gi|294353030|gb|ADE63371.1| isoleucyl-tRNA synthetase [Yersinia pestis Z176003]
 gi|320016961|gb|ADW00533.1| isoleucyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 938

 Score = 47.2 bits (111), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPA 672


>gi|228993492|ref|ZP_04153401.1| Leucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766207|gb|EEM14852.1| Leucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 802

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDASNQELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|315179260|gb|ADT86174.1| isoleucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 948

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 582 SIAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
             T Y   +  + + L  +     +   T+          L+ L N  N  + I A  ++
Sbjct: 635 ASTDYTGEVAVSDEILKRSADSYRRIRNTAR-------FFLANL-NGFNPATDIIAADEM 686

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
                   D   +  A A     E+ K +   N    +++L
Sbjct: 687 V-----ALDRWAVARAMAA--QQEIVKAYAEYNTHAVVQRL 720


>gi|312793434|ref|YP_004026357.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312180574|gb|ADQ40744.1| leucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 817

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 38/174 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW----- 337
           N ++  +++E        + A   RL +L        ++++ Q +      L++      
Sbjct: 585 NIVSPEDIVE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 338 -------PQTSTSKGIIDPAVLSALY-------ND----LNTVSAIQALHKLAR 373
                   ++   +  +D  +   L         D     N  +AI  + +L  
Sbjct: 638 ELKSKLADESLLGESELDDELKYRLNYTIKKVTEDIGERFNFNTAISTIMELLN 691


>gi|123440980|ref|YP_001004969.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|166229780|sp|A1JJE1|SYI_YERE8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122087941|emb|CAL10729.1| isoleucyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLS 353
           +  T Y   I  + + L  +     +   T+     +    DPA+  
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPALHQ 675


>gi|56697968|ref|YP_168339.1| isoleucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|81819937|sp|Q5LNR7|SYI_SILPO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56679705|gb|AAV96371.1| isoleucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 970

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I  +E++       + + A ++RL 
Sbjct: 623 QACGTLGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPDEVV-------KQYGADILRLW 675

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 676 VAQTDYTADQRIGPEILKGVADSYRRLRNT 705


>gi|238795021|ref|ZP_04638616.1| Isoleucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238725672|gb|EEQ17231.1| Isoleucyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 40/107 (37%), Gaps = 11/107 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLS 353
           +  T Y   I  + + L  +     +   T+     +    DPA+  
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPALHQ 675


>gi|114564054|ref|YP_751568.1| isoleucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|114335347|gb|ABI72729.1| Isoleucyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 943

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 556 EFHGHDIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSVGN 615

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I   +++           A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 616 VIAPLQVINKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 666


>gi|319898928|ref|YP_004159021.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402892|emb|CBI76443.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 513

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   IV D L R  R    +    +  + TD         + +  +  +N     
Sbjct: 18  PHIGHAYNAIVSDALARFQRADGKD---VFFLSGTD-----EHGLKMQQTAQMLNITPQQ 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F K    L C       R T   H      L + +   G  Y       +  
Sbjct: 70  LADRNSAVFQKMLEILNCSNNDF-IRTTEKRHHQASQELWKKMEAKGDIYLGRYTGWYSV 128

Query: 157 SSIPNY 162
           S    Y
Sbjct: 129 SQEAYY 134



 Score = 36.8 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D+I  H     A       IE    I+ H GFL   G KMSKS GN +   E+
Sbjct: 257 DIHIIGKDIIRFHTVYWPAFLMSV-GIELPKRIFAH-GFLLNRGVKMSKSIGNVVDPFEM 314

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           ++        +    +R   L
Sbjct: 315 VDR-------YGLDQVRYFFL 328


>gi|300309930|ref|YP_003774022.1| leucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300072715|gb|ADJ62114.1| leucyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 882

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 15/135 (11%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + Y C    Y     H+G+ R   + DV+YR LR       +          D     A 
Sbjct: 40  KFYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA- 92

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NII 140
            E+ ++      +  T  N          +  LA       T   P+     Q     ++
Sbjct: 93  -ENAAMANGVPPAQWTYSNIDYMKSQMQSMG-LAIDWSREMTACRPEYYKWNQWMFLKML 150

Query: 141 LHGHAYEANNEIIFD 155
             G  Y+    + +D
Sbjct: 151 EKGIIYKKTGTVNWD 165


>gi|294054396|ref|YP_003548054.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613729|gb|ADE53884.1| methionyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 511

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 11/118 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   ++ D++ R  R    E     V+ +T +D+      + +  +     A   
Sbjct: 18  PHLGHAYEKVLTDIVARYRRLMGDE-----VKFLTGLDEH---GQKVQMSAQKEGIAPQE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
           I  +   +F     RL         R T   H   +  ++Q +   G  Y+A     +
Sbjct: 70  ICDRLAVEFQGVCGRLHISNDD-YIRTTQARHKKVVQEILQTLYDKGEIYKAEYSGYY 126


>gi|282900792|ref|ZP_06308732.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194322|gb|EFA69279.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 529

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 60/351 (17%), Positives = 101/351 (28%), Gaps = 87/351 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D + R  R    E     V  IT  D+      + +  +     
Sbjct: 20  VNDVPHIGSAYTTIAADTIARFQRLLGNE-----VIFITGTDEH---GQKIQRSAQSQGK 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
           +      +    F+     L         R T+   Q+I       +   G  Y    + 
Sbjct: 72  SPQEFCDQIVPSFIDLWQILNIQY-DRFSRTTDLKHQVIVKEFFHRVWEQGDIYRGEQKG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK----KNPAD--FILWKRSTPMEPGWES 206
            +  S          ++  E   G R P    K    ++  +  F L K   P+E  ++S
Sbjct: 131 WYCVSCEEF------KEERELIEGKRCPIHTTKEVEWRDEQNYFFRLSKYQKPLEEFYQS 184

Query: 207 PWGRGRPG-------------------------WHIECSAMSSHYLGKVFDIHGGGLDLI 241
                +P                          W       + H L   FD   G +  +
Sbjct: 185 HPNFIQPASRRNEVLSFVSQGLQDFSISRVNLDWGFPVPVDTQHTLYVWFDALLGYITAL 244

Query: 242 F-----PHHENEIAQSCCADRI-------EKTANIW---------------IHNGFLNLE 274
                 P  EN +++    +            A  W                 +GFL  +
Sbjct: 245 LEPGTEPTLENAVSKWWPINLHLIGKDILRFHAVYWPAMLMSANLPLPKQVFGHGFLTKD 304

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           G+KM K+ GN +             + + +  +R   L     + I+F   
Sbjct: 305 GQKMGKTLGNTV-------DPVALVKKYGSDAVRYYFL-----KEIEFGKD 343


>gi|206895292|ref|YP_002246977.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737909|gb|ACI16987.1| leucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 838

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 55/208 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG++    H       +            E  + ++   G + L G  MSKS G
Sbjct: 542 PVDIYIGGVEHAVLHLLYSRFITKALKDMGYVTISEPFSKLFT-QGMVTLGGSAMSKSKG 600

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +++L       R + A   R+  + +    +  +++ Q L      + + W    
Sbjct: 601 NIVDPDDIL-------RDYGADAARMYTLFVAPPEKDFEWSQQGLEGIVRFIRRIWNFYC 653

Query: 342 TSKGIIDPAVLSAL---------YND----------------------LNTVSAIQALHK 370
                +  AV + +         Y++                       NT  AI A+ +
Sbjct: 654 KYADEVKEAVAAPMGKLFEGMSEYDEKALRAVNRLVYRVTEDIEDNYRFNT--AIAAMME 711

Query: 371 LARESTKNHD------LLPIFNASAHIL 392
              E T   +      +  +    A +L
Sbjct: 712 FLNEVTDYDEKVSSAVMKTLLETFAKVL 739



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 36/111 (32%), Gaps = 13/111 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+ R  R    +  V +     D      E A  E    P N      
Sbjct: 63  HMGHVRNYSLGDVVARYNRMRGFD--VLHPMGW-DAFGLPAENAAIERGIHPEN-----W 114

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAY 146
           T  N     +   +L       +  AT  +P      Q     +  +G AY
Sbjct: 115 TLSNIGYMREQMKKLGFSYDWDREVAT-CLPDYYKWTQWLFLKLYENGLAY 164


>gi|260771134|ref|ZP_05880061.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260613731|gb|EEX38923.1| isoleucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 948

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 57/161 (35%), Gaps = 22/161 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 582 SIAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
             T Y   +  + + L  +     +   T+          L+ L N  N  + I A  ++
Sbjct: 635 ASTDYTGEVAVSDEILKRSADSYRRIRNTAR-------FFLANL-NGFNPATDIIAADEM 686

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
                   D   +  A A     E+ K +   N    +++L
Sbjct: 687 V-----ALDRWAVARAMAA--QQEIVKAYAEYNTHAVVQRL 720


>gi|229117392|ref|ZP_04246768.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228666002|gb|EEL21468.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-3]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|195501663|ref|XP_002097889.1| GE10041 [Drosophila yakuba]
 gi|194183990|gb|EDW97601.1| GE10041 [Drosophila yakuba]
          Length = 579

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 11/152 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y E+ V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLHGIPVA--K 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+ +  + F                R T   H   +    + +   GH Y A    
Sbjct: 87  YCDDISQRYREVFRSA----GIQPEDF-IRTTEDRHKRAVASFWRRLHTRGHIYSAAYSG 141

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +   S   + + S+ ++DE   GTR   +  
Sbjct: 142 WYCV-SDETFLTDSQLRLDE-ASGTRYSLESG 171



 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 23/129 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    +++H+ +  ++G+KMSKS  N +             R +    +R  +L  
Sbjct: 296 AADLEPPRQLYVHSHW-TVDGQKMSKSKHNVV-------DPVQAARQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT---VQRLTEAE------ILLSKWPQTSTSKGIIDP-AVLSALYNDLNT 361
              H     +++    QR+  +E       LLS+    S + G I P A    L + L +
Sbjct: 348 GVAH--SDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSASAEHLADLLRS 405

Query: 362 VSAIQALHK 370
           + A + L  
Sbjct: 406 LDAAKRLQD 414


>gi|147677174|ref|YP_001211389.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|189083135|sp|A5D416|SYL_PELTS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146273271|dbj|BAF59020.1| leucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 827

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +           +E  +N+ +  G +  +G KMSKS G
Sbjct: 531 PVDQYIGGVEHAILHLLYSRFFTKVLYDLKLVSNLEPFSNL-LTQGMVLKDGAKMSKSRG 589

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N ++  +++         + A   RL +L        ++++ Q +      L++ W    
Sbjct: 590 NVVSPEDIVAR-------YGADTARLFILFAAPPERDLEWSDQGVEGCYRFLNRVWRLVM 642

Query: 342 TSKGIIDPA 350
              G++  A
Sbjct: 643 PLAGLLKEA 651


>gi|218562787|ref|YP_002344566.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|81549216|sp|Q9PNC0|SYR_CAMJE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|112360493|emb|CAL35290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 530

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 132/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 92  --INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
             +++ +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 171 SILHENVEYPEQYYKGEYIVDLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 230

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 231 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 277

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 278 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 329

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 330 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 382

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 383 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 442

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 443 LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFH 485


>gi|93005232|ref|YP_579669.1| isoleucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|92392910|gb|ABE74185.1| Isoleucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 947

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN IT  E +           A ++RL +
Sbjct: 582 SEAMYERPPFKQVLTHGFVVDENGRKMSKSLGNIITPQEEINKTG-------ADMLRLWI 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             + YR  +         A  +  +   T           L A  +D +
Sbjct: 635 ASSDYRYEMSAGKTVFKGAIDMYRRIRNTLR--------FLLANTDDFD 675


>gi|317484604|ref|ZP_07943508.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924144|gb|EFV45326.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 662

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 42/130 (32%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D L R        +   ++    +  DKI++ A           
Sbjct: 14  VNARPHLGHAYTTIVADSLRRFHTLLG--EDTWFLTGTDEHGDKIVKAAEA------AGQ 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                    + QF     +L         R T  +H  ++   +Q +  +G  Y   +  
Sbjct: 66  TPQEFVDGISGQFQALWPKLGIKH-DQFIRTTDADHKARVQAFLQKVYDNGDIYFGEHGG 124

Query: 153 IFDTSSIPNY 162
            + T     Y
Sbjct: 125 HYCTGCERFY 134


>gi|237749492|ref|ZP_04579972.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380854|gb|EEO30945.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 880

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 39/135 (28%), Gaps = 15/135 (11%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + Y C    Y     H+G+ R   + DV+YR LR       +       D      E A 
Sbjct: 37  KFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW---DAFGMPAENAA 93

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NII 140
             H         +  T  N          +  LA       T   P      Q     ++
Sbjct: 94  MAH-----GIPPAEWTYSNITHMKGQMASMG-LAIDWSREMTACKPDYYKWNQWMFLKML 147

Query: 141 LHGHAYEANNEIIFD 155
             G  Y+    + +D
Sbjct: 148 EKGIIYQKTGTVNWD 162


>gi|24380137|ref|NP_722092.1| valyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81450887|sp|Q8DSL1|SYV_STRMU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|24378137|gb|AAN59398.1|AE015005_4 putative valyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 883

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           +  +G   PE            WK+   +   W S   W     GW    S     Y   
Sbjct: 424 DMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDTDSEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS          N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGCRPFQNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           ++++        + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 533 DVVD-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|312622508|ref|YP_004024121.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
 gi|312202975|gb|ADQ46302.1| leucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis 2002]
          Length = 817

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 38/174 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW----- 337
           N ++  +++E        + A   RL +L        ++++ Q +      L++      
Sbjct: 585 NIVSPEDIVE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 338 -------PQTSTSKGIIDPAVLSALY-------ND----LNTVSAIQALHKLAR 373
                    +   +  +D  +   L         D     N  +AI  + +L  
Sbjct: 638 ELKNKLADDSLIGESELDDELRYRLNYTIKKVTEDIAERFNFNTAISTIMELLN 691


>gi|229075653|ref|ZP_04208635.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228707429|gb|EEL59620.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|222143238|pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase
           From Campylobacter Jejuni
          Length = 464

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 74/403 (18%), Positives = 132/403 (32%), Gaps = 77/403 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 41  PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 96

Query: 92  --INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
             +++ +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 97  SILHENVEYPEQYYKGEYIVDLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 156

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 157 -----QAKIKIDSYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSQKG 203

Query: 202 PGWE----SPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 204 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 255

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 256 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 308

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 309 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 368

Query: 355 LYND-----LNTVSAIQALHKL--ARESTKNHDLLPIFNASAH 390
           L  D        ++    L+    AR   K  D L    A+ H
Sbjct: 369 LNQDGVNLLFEALNLKAVLNDAFEARALQKIPDYLKNLAANFH 411


>gi|222824044|ref|YP_002575618.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|254782489|sp|B9KCS8|SYL_CAMLR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222539266|gb|ACM64367.1| leucyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 809

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 56/145 (38%), Gaps = 20/145 (13%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G +  +G KMSKS GN +  + ++E        + A   RL +L      
Sbjct: 562 EPFNRL-LTQGMVTKDGAKMSKSKGNVVDPDYIIE-------KYGADSARLFILFAAPPA 613

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYND-----LNTVSAIQALHK 370
           + +++    L  A   +++  + + S   G +      +L  +     L    A++   +
Sbjct: 614 KELEWNDSALEGAFKFINRLYEKAMSLECGKLQEIDHQSLNKEEKYARLKVYEALKKSFE 673

Query: 371 LARESTKNHDLLP----IFNASAHI 391
           +  ES   + L+       NA   I
Sbjct: 674 VYEESFAFNTLIAACMEALNALNAI 698



 Score = 39.8 bits (92), Expect = 0.87,   Method: Composition-based stats.
 Identities = 33/215 (15%), Positives = 62/215 (28%), Gaps = 39/215 (18%)

Query: 13  RKITEFQAID----PSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           ++   F+  D    P    + M+   P      H+G+ R   + D + R  R        
Sbjct: 17  QEKEYFEPKDDFSLPKKYILSMF---PYPSGRIHMGHVRNYSIGDAMARYYRKKGF---- 69

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC------LAPT 120
               N+             E+ +I         T +N      +   L        +  T
Sbjct: 70  ----NVLHPIGFDSFGMPAENAAIKHGIHPKKWTYENIDYMQNELASLGFSFSKKRMLAT 125

Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
             P  T    +  + I  +   G  Y    E+   +          +  ++++ K     
Sbjct: 126 SDPLYTKF--EQEFFI-KMYEKGLIYTKEAEVNWCENDKT----VLANEQVEDGKCWRCG 178

Query: 180 PEKYHKKNPADFI--------LWKRSTPMEPGWES 206
            E   KK P  ++        L +    +E  W S
Sbjct: 179 HEVIRKKMPGYYVKITAYADELLQDLKKLEGKWPS 213


>gi|323478896|gb|ADX78335.1| valyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 880

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 66/182 (36%), Gaps = 22/182 (12%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAM 222
           +  ++  E  +G  VP             W + + +   W S   W     GW  E S  
Sbjct: 420 WYHKETGEMYVGMEVPADSEN--------WVQDSDVLDTWFSSALWPFSTMGWPDEASED 471

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS          N+ IH    + +GRKMSKS 
Sbjct: 472 YQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDEQGRKMSKSL 529

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           GN I   +++E        + A  +R  +        + + F+ +++  +   ++K    
Sbjct: 530 GNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNA 581

Query: 341 ST 342
           S 
Sbjct: 582 SR 583


>gi|14591265|ref|NP_143342.1| arginyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|7674343|sp|O59147|SYR_PYRHO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|256032304|pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
           Synthetase Complexed With Trna(Arg) And An Atp Analog
           (Anp)
 gi|256032306|pdb|2ZUF|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
           Synthetase Complexed With Trna(Arg)
 gi|3257902|dbj|BAA30585.1| 629aa long hypothetical arginyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 629

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 61/160 (38%), Gaps = 26/160 (16%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  I+ DV+ R+LR+   E     V+N   IDD  I+ A+     + + +   
Sbjct: 133 PLHMGHARNAILGDVMARILRFLGYEVE---VQNY--IDDLGIQFAQVYWGYLRLKEEFE 187

Query: 98  IITSKNTQQFVKDT---TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
            I ++  ++ +KD      L  L               + + + +  +          I 
Sbjct: 188 RIMNELRERGLKDNPIDHALGLL--------------YVEVNRRLEDN----PELENEIR 229

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
           D       G    RK+ E+ +  ++   Y      D ++W
Sbjct: 230 DIMKKLESGELYGRKLAEEVVRAQMVTTYKLGVKYDLLVW 269


>gi|152977105|ref|YP_001376622.1| leucyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082981|sp|A7GU19|SYL_BACCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152025857|gb|ABS23627.1| leucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 802

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T++++ L    A + ++
Sbjct: 636 QENGELSEKITDAPNKELE-----KAYHQTVKKVTEDYEELHFNTAISQMM 681


>gi|313890366|ref|ZP_07823997.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121209|gb|EFR44317.1| leucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 833

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 53/155 (34%), Gaps = 32/155 (20%)

Query: 254 CADRIEKTANIWIHNGF---LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-L 309
             D++EK  N + H      L     KMSKS  N I  ++++E        + A  +R  
Sbjct: 584 ATDKVEKRDNSFFHVETGEELEQAPAKMSKSLKNVINPDDVVE-------EYGADTLRVY 636

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----------------AVL 352
            M M      I ++ + L  +   L +  +  T+K ++                     +
Sbjct: 637 EMFMGPLDASIAWSEEGLEGSRKFLDRVYRLITTKALVAENSGALDKVYHETVKTVTEQI 696

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
            A+    NT  AI  L      + K   L   +  
Sbjct: 697 EAM--KFNT--AIAQLMIFINAANKEESLFEDYAK 727


>gi|303327269|ref|ZP_07357711.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302863257|gb|EFL86189.1| leucine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 837

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN +   E++       + + A  +RL  L      
Sbjct: 572 EPFTNL-LTQGMVLKDGGKMSKSKGNVVDPTEMI-------KKYGADTVRLFCLFAAPPE 623

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
              D++   +  A   LS+  +  T +  
Sbjct: 624 RDFDWSDSGIEGASRFLSRVWRLFTEEEA 652


>gi|296116331|ref|ZP_06834947.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
 gi|295977150|gb|EFG83912.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
          Length = 512

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 37/114 (32%), Gaps = 11/114 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   +  DV+ R  R    +        +T  D+      + E  +     
Sbjct: 14  VNGAPHIGHAYTSVAADVIARFKRLAGFDVFF-----LTGTDEH---GQKVEQAAHTAGV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
               + ++    F     ++A        R T   H      L + +  +GH Y
Sbjct: 66  TPIELANRVAADFRDMYDKMAISYDDF-IRTTQPRHAEGAAALWKKLEENGHIY 118


>gi|269102010|ref|ZP_06154707.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268161908|gb|EEZ40404.1| leucyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 858

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 53/155 (34%), Gaps = 48/155 (30%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDF 322
           H+G +     KMSKS  N I   E++E        + A  +RL M+      P    +++
Sbjct: 613 HSGMI-----KMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPADMTLEW 657

Query: 323 TVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL------------------YND--- 358
               +  A   L +        T+ G I+   ++AL                   +D   
Sbjct: 658 QESGVEGANRFLKRVWKLVHELTADGAIEALDVAALTGDQKALRRDVHKTIAKVSDDIGR 717

Query: 359 ---LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
               NT  AI A+ +L  + TK         A   
Sbjct: 718 RQTFNT--AIAAIMELMNKLTKASLESAQDRALMD 750


>gi|229174562|ref|ZP_04302092.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608867|gb|EEK66159.1| Isoleucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|99082229|ref|YP_614383.1| isoleucyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|99038509|gb|ABF65121.1| Isoleucyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 974

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+          N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 627 QASATKGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPEEIV-------KQYGADILRLW 679

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 680 VAQTDYTADQRIGAEILKGTADSYRRLRNT 709


>gi|269796313|ref|YP_003315768.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098498|gb|ACZ22934.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 546

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 47/142 (33%), Gaps = 18/142 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN- 93
           V D  HIG+A   +  DVL R  R    ++ V ++    +   K++  A     +     
Sbjct: 24  VNDAPHIGHAYTTVAGDVLTRWHRQR--QERVWFLTGTDEHGQKVMRTAEANGVTPQEWA 81

Query: 94  ----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
               ++      +       D  R      T QPR T  +      IQ++   G  Y  +
Sbjct: 82  DRLVESSWEPVLETLDARNDDFIR------TTQPRHTERV---QRFIQDLHDKGEIYAGS 132

Query: 150 NEIIFDTSSIPNYGSFSRRKID 171
            E  +       Y       +D
Sbjct: 133 YEGPYCVG-CEEY-KLPGELLD 152


>gi|257466511|ref|ZP_05630822.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917667|ref|ZP_07913907.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691542|gb|EFS28377.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 640

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 100/334 (29%), Gaps = 77/334 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +     K V ++    +   K+ + A+++        
Sbjct: 13  VNGDPHVGSAYTTIAADVMSRYQKLAG--KNVYFLTGTDEHGQKVEQTAKEKGF------ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                T K    F +    L         R T   H   +  +++ +   G  Y  E   
Sbjct: 65  TPQAWTDKMAPAFTEMWKALNIHYSDF-IRTTEQRHKDSVKKILKTVYEKGDIYKGEYEG 123

Query: 151 EIIFDTSSI------------PNYG-SFSRRKIDE----QKMGTRVPEKYHKKNPADFIL 193
           +      +             P+ G   S  K +              K+ +++P DFIL
Sbjct: 124 QYCISCETFFPENQIVEAGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIEEHP-DFIL 182

Query: 194 WKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLG 228
                     +            + +  G P      HI            +A       
Sbjct: 183 PHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGYENDS 242

Query: 229 KVFDI--------HGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
           + FD         H  G D+I  H         C       K  +  + +G+   EG KM
Sbjct: 243 EKFDTYWNNARVCHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKM 298

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           SKS GN +   + +       + +     R  +L
Sbjct: 299 SKSKGNVVNPYDEI-------KKYGVDAFRYYLL 325


>gi|229916147|ref|YP_002884793.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467576|gb|ACQ69348.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 547

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 17/129 (13%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G  VY     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWVYANGSLHLGHISSLLSGDILARYYRSKG--EDVLYVSGSDCNGTPITVRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL--- 141
           QE        +++ I  +   +FV   + L         R T+H  Q   ++Q+I     
Sbjct: 60  QE------GVSVTEIADRYHDEFVACYSSLGFSY-DVYAR-TDH-SQHHEVVQDIFAELY 110

Query: 142 -HGHAYEAN 149
             G  Y+  
Sbjct: 111 SKGFIYKKE 119


>gi|62321577|dbj|BAD95115.1| putative leucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 612

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 56/195 (28%), Gaps = 49/195 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG + L   KMSKS GNF T+ 
Sbjct: 189 PLDLRVSGKDLIQNHLTFFIYNHTALMANRNWPRGIRCNGHIMLNSEKMSKSTGNFRTLR 248

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E     G        R  +                                 G+ D 
Sbjct: 249 QSIEEFSATGT-------RFCL----------------------------ADAGDGVDDA 273

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                      T +A  A+ +L +E T   ++L + ++    L       + +K     +
Sbjct: 274 NFA------FETANA--AILRLTKELTWMEEVLDVESS----LRTGPPSTYADKVFENDM 321

Query: 410 EKLVQERLILLKMKK 424
              +  RL     K 
Sbjct: 322 N--IALRLTERAYKD 334


>gi|308185615|ref|YP_003929746.1| isoleucyl-tRNA synthetase [Pantoea vagans C9-1]
 gi|308056125|gb|ADO08297.1| isoleucyl-tRNA synthetase [Pantoea vagans C9-1]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN +   +++           A ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  +     +   T+ 
Sbjct: 629 VASTDYSGEMAVSDEILKRSADAYRRIRNTAR 660


>gi|157368943|ref|YP_001476932.1| isoleucyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|166980058|sp|A8G9L4|SYI_SERP5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157320707|gb|ABV39804.1| isoleucyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 ISTAMKGKAPYKEVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|79339972|ref|NP_172433.2| ATP binding / aminoacyl-tRNA ligase/ leucine-tRNA ligase/
           nucleotide binding [Arabidopsis thaliana]
 gi|332190348|gb|AEE28469.1| leucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1091

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 56/195 (28%), Gaps = 49/195 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG + L   KMSKS GNF T+ 
Sbjct: 668 PLDLRVSGKDLIQNHLTFFIYNHTALMANRNWPRGIRCNGHIMLNSEKMSKSTGNFRTLR 727

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E     G        R  +                                 G+ D 
Sbjct: 728 QSIEEFSATGT-------RFCL----------------------------ADAGDGVDDA 752

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                      T +A  A+ +L +E T   ++L + ++    L       + +K     +
Sbjct: 753 NFA------FETANA--AILRLTKELTWMEEVLDVESS----LRTGPPSTYADKVFENDM 800

Query: 410 EKLVQERLILLKMKK 424
              +  RL     K 
Sbjct: 801 N--IALRLTERAYKD 813


>gi|49474218|ref|YP_032260.1| methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|49239722|emb|CAF26101.1| Methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 519

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 17/129 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D L R  R           +N+  +        + +  +  +      
Sbjct: 18  PHIGHAYSAIASDALARFQRLDG--------KNVFFLSGTDEHGLKMQQTATALGMTPKQ 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
           +  +N+  F K    L C       R T         ++    + +   G  Y    +  
Sbjct: 70  LADRNSAVFKKMLAALNCSNDDF-IRTTEERHYQACQEIW---KKMQADGDIYLGCYKGW 125

Query: 154 FDTSSIPNY 162
           +       Y
Sbjct: 126 YSVRQEAYY 134


>gi|319956382|ref|YP_004167645.1| isoleucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418786|gb|ADV45896.1| Isoleucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 918

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 52/142 (36%), Gaps = 20/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +      +I  H   ++  G KMSKS GN +   ++        + + + ++RL +
Sbjct: 584 SSAINFHPPYRSILTHGFTVDENGEKMSKSRGNVVAPQKVT-------QQFGSEILRLWV 636

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
            ++ Y+  +  +   L +      K   T           L A  NDL  +  ++ L +L
Sbjct: 637 ALSDYQSDLKISDGILKQTAEQYRKIRNTFR--------FLLANVNDLKALRPVEELGEL 688

Query: 372 ARESTKNHDLLPIFNASAHILG 393
            R       L       A + G
Sbjct: 689 DRWI-----LAEAGEVFAEVKG 705


>gi|227529668|ref|ZP_03959717.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
 gi|227350458|gb|EEJ40749.1| valyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
          Length = 885

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P D   W++   +   W S   W     GW    SA    Y      +   G D+IF   
Sbjct: 440 PKDAENWEQDKDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLV--TGYDIIFFWV 497

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++       + +   
Sbjct: 498 SRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVI-------KKYGVD 550

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+  ++  A   ++K    S 
Sbjct: 551 ALRWFLITGSTPGQDIRFSYTKMDAAWNFINKIWNASR 588


>gi|217076607|ref|YP_002334323.1| leucyl-tRNA synthetase [Thermosipho africanus TCF52B]
 gi|217036460|gb|ACJ74982.1| leucyl-tRNA synthetase [Thermosipho africanus TCF52B]
          Length = 825

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N++   G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAVLHLLYSRFITKVLHDMGYVDFDEPFTNLFT-QGMIYKDGWKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           N ++ ++++E        + A  +R   + M    +  +++   +      L + 
Sbjct: 587 NVVSPDDMIE-------KYGADTLRTYILFMAPPEKDAEWSDAGIEGVHRFLKRL 634


>gi|47779360|gb|AAT38589.1| predicted leucyl tRNA synthetase [uncultured gamma proteobacterium
           eBACHOT4E07]
          Length = 801

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 58/178 (32%), Gaps = 47/178 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 509 PVDLYIGGIEHAILHLLYSRFFHKALRDIGLVEGDEPFKRL-LTQGMVLKDGAKMSKSKG 567

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEILLSKWPQ 339
           N +     +E        + A  +RL M+ T    P    ++++   +  A   L +   
Sbjct: 568 NTVDPQSYIE-------KYGADTVRLYMMFT---SPPEQSLEWSESSVEGASRFLKRIWS 617

Query: 340 TSTSKGII--DPAV----------------LSALYND------LNTVSAIQALHKLAR 373
               K  I  D                   L  + ND       NT  AI A+ +L  
Sbjct: 618 LIEGKKYIKLDMKFEFSKEEIELRRKCHSTLKKVENDYESRFSFNT--AIAAIMELLN 673


>gi|238782684|ref|ZP_04626714.1| Isoleucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238716344|gb|EEQ08326.1| Isoleucyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPA 672


>gi|269467789|gb|EEZ79547.1| isoleucyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
          Length = 923

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++  G KMSKS GN I   +++ +         A ++RL +
Sbjct: 569 SVAINGHAPYKQVLTHGFTVDQNGHKMSKSLGNVIPPQKVVNSLG-------ADILRLWI 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T  
Sbjct: 622 ASTDYTGEMTVSDEILKRSADSYRRIRNTVR 652


>gi|255713850|ref|XP_002553207.1| KLTH0D11440p [Lachancea thermotolerans]
 gi|238934587|emb|CAR22769.1| KLTH0D11440p [Lachancea thermotolerans]
          Length = 1098

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 689 PLDVSISGKDLITNHLTFFIYTHVALFPKKFWPRGIRANGHLMLNNAKMSKSTGNFMTLK 748

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE--AEILLSKWPQTSTSKGII 347
           +++E        + A   R+A+      + I+     L E  A   + +          +
Sbjct: 749 QIVE-------KFGADASRIALADAG--DTIE--DANLDETNANAAILRLYNLKEWADEV 797


>gi|254468518|ref|ZP_05081924.1| isoleucyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087328|gb|EDZ64611.1| isoleucyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 923

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +G+KMSKS GN I   ++++        + A ++R  +
Sbjct: 578 ASAISGQAPYKALLTHGFVVDGQGKKMSKSKGNVIAPQKIMD-------QYGADILRFWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            MT +   ++ + + +  +     +   T
Sbjct: 631 AMTDFSGELNISDEIIKRSADGYRRLRNT 659


>gi|116492070|ref|YP_803805.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116102220|gb|ABJ67363.1| methionyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 673

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 60/158 (37%), Gaps = 40/158 (25%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +E+   I+ H G+L ++  KMSKS GN I    ++       +++    +R  +L  
Sbjct: 288 ALGLEQPDQIYGH-GWLLMKDSKMSKSKGNVIYPETIV-------KNYGLDALRYYLLKA 339

Query: 315 -HYREPIDFTVQ----------------RLTEAEILLSKWP-------QTSTSKGIIDPA 350
             Y    +FT +                 L     +++K+        Q+  +   +D  
Sbjct: 340 MPYGNDGNFTPEDFISKINFDLANDLGNLLNRTVAMINKYEGGVIPTFQSGVNDVDVDLE 399

Query: 351 VLSA--------LYNDLNTVSAIQALHKLARESTKNHD 380
             +A        L N+L+   A+  + KL   + K  D
Sbjct: 400 TTAATTIKNYEDLMNNLHFADALAEIWKLVARTNKYID 437


>gi|240850631|ref|YP_002972031.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267754|gb|ACS51342.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 519

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 38/133 (28%), Gaps = 17/133 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R           +N+  +        + +  +  +  
Sbjct: 14  PNGAPHIGHAYSAIASDVLARFQRLNG--------KNVFFLSGTDEHGLKMQQTAAALGM 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEAN 149
               +  +N+  F K    L C       R T         ++    + +  +G  Y   
Sbjct: 66  TPQQLADRNSAVFQKMLAVLNCSNDDF-IRTTEERHYQACQEIW---KKMEANGDIYLGR 121

Query: 150 NEIIFDTSSIPNY 162
               +       Y
Sbjct: 122 YTGWYSVRQEAYY 134


>gi|168014284|ref|XP_001759682.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689221|gb|EDQ75594.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1104

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 32/80 (40%), Gaps = 7/80 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DLI  H    I         EK    +  NG L L   KMSKS GNF+TI 
Sbjct: 677 PFDLRVSGKDLIQNHLTFCIYNHTAMFPKEKWPKGFRCNGHLLLNSEKMSKSTGNFLTIL 736

Query: 290 ELLETKKFGGRSWPAPVIRL 309
             +E        + A   R 
Sbjct: 737 SSIEL-------FSADATRF 749


>gi|332703886|ref|ZP_08423974.1| Methionyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332554035|gb|EGJ51079.1| Methionyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 660

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 74/428 (17%), Positives = 123/428 (28%), Gaps = 99/428 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R    E    ++    +  DKI++ A +         
Sbjct: 13  VNGSPHLGHAYTTLVADSLARFHRAMGQE--TFFLTGTDEHGDKIVQAADK------AGT 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
               +   N+  F     R      T   R T   H   +  ++Q +   G  Y  E + 
Sbjct: 65  TPQALVDANSAAFRDLWKRFGITN-TGFVRTTEERHKRCVQAILQKVFDAGDIYHGEYSG 123

Query: 151 EIIFDTSSIPNYGSF-SRRKIDEQKMGTRVPEKYHKKNPADFILWKR----STPM----- 200
              F              +  D Q     + EK +    + +  W      + P      
Sbjct: 124 HYCFGCERFLTDKELVDGKCPDHQIAPELISEKNYFFRMSKYQGWLAEHIKANPGFIRPQ 183

Query: 201 ----------EPGWESPWGRGRP----GWHIECSAMSSHYLGKVFDIHGGGLD-LIFPHH 245
                     E G        RP     W IE    + +     FD     +  L +P  
Sbjct: 184 RYEAEVLSMLEGGVLEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSALGWPEG 243

Query: 246 ENEIAQS------CCADRIEKTANIW----------------IHNGFLNLEGRKMSKSNG 283
           E+  A           D ++  A  W                +H  +L +   KMSKS G
Sbjct: 244 EDYRAFWPMVEHLVAKDILKPHAVFWPTMLKSAGLTPYRHLNVHGYWL-VRDTKMSKSLG 302

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-----TEAEILL--- 334
           N +               +     R  +L    +     F+ + L      +    L   
Sbjct: 303 NVV-------DPLTMADKYGLSAFRYFLLREMQFGSDASFSEEALVGRLNADLANDLGNL 355

Query: 335 --------SKWPQTSTSKGIID--------PAVLSALYN------DLNTVSAIQALHKLA 372
                   SK+ Q     G ++            +A+ N      +     A+++L +L 
Sbjct: 356 FSRTLTMTSKYFQGQAPDGQVETRDNSEILELARTAMENYQAQFAECVFSRALESLWELV 415

Query: 373 RESTKNHD 380
           R   K  D
Sbjct: 416 RGLNKYVD 423


>gi|218961403|ref|YP_001741178.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
 gi|167730060|emb|CAO80972.1| leucyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
          Length = 827

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
           +  E  A + +  G +  +G KMSKS GN +    +++        + A  +R  +L  +
Sbjct: 559 NCDEPFARL-LTQGMVTKDGAKMSKSKGNVVDPQYIIDR-------FGADTLRTFLLFAS 610

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
              + ++++   +  A   L++  +   S 
Sbjct: 611 PPEKDVEWSDDGIMGAFRFLNRVWRLVESN 640


>gi|87302693|ref|ZP_01085504.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
 gi|87282576|gb|EAQ74534.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. WH 5701]
          Length = 883

 Score = 46.8 bits (110), Expect = 0.007,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 46/165 (27%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R     + V +              A      I  
Sbjct: 57  PYPSGNLHMGHVRNYVITDVIARVQRLRG--RQVLHPMGWDAFGLPAENAA------IER 108

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T  N  Q      RL       +  AT H        Q         G AY  
Sbjct: 109 GVDPGDWTDANIAQMRAQLQRLGLSIDWDREVATCHADYY-RWTQWLFLQFHEAGLAYRK 167

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              + +D          +  ++D +    R   +  K+    + L
Sbjct: 168 EATVNWDPIDQT---VLANEQVDGEGRSWRSGARVEKRQLRQWFL 209


>gi|229031527|ref|ZP_04187527.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729816|gb|EEL80796.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|229198007|ref|ZP_04324721.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228585486|gb|EEK43590.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|170782642|ref|YP_001710976.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169157212|emb|CAQ02395.1| putative methionyl tRNA synthetase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 528

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 43/124 (34%), Gaps = 10/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +   T+    TD   + I R    + + P   
Sbjct: 19  VNDVPHIGHAYTEVAADVLARWHRQRGDD---TWFLTGTDEHGQKILRTATANDTTPKAW 75

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++T    Q  ++              R T+  H   +   +Q +   G  Y    + 
Sbjct: 76  ADRLVTESW-QPLLEAVDISN----DDFIRTTDARHEESVKVFLQRLHDAGFIYTGEYKG 130

Query: 153 IFDT 156
            +  
Sbjct: 131 YYCV 134


>gi|149195098|ref|ZP_01872190.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134811|gb|EDM23295.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 539

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  D L R+ R+   +    Y  N       ++  +        +
Sbjct: 112 PT--GPLHIGHARGAIFGDALTRIGRHIGYKITTEYYVNDAGRQINLLGLSVYLAAREIL 169

Query: 93  NDAISIITSKNTQQFVKDTTR 113
              ++        +++KD  +
Sbjct: 170 GLNVTWPDEYYKGEYIKDLAK 190


>gi|21222203|ref|NP_627982.1| methionyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|256786707|ref|ZP_05525138.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|289770602|ref|ZP_06529980.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
 gi|25009395|sp|Q9F2I9|SYM_STRCO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10432496|emb|CAC10330.1| putative methionyl tRNA synthetase [Streptomyces coelicolor A3(2)]
 gi|289700801|gb|EFD68230.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
          Length = 538

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 49/156 (31%), Gaps = 12/156 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     +     
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANGVTPQAW- 79

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++T    +   +              R T   H  ++   +Q++   G  Y+   E 
Sbjct: 80  ADKLVTESW-KPLWEHLDIAN----DDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
            +       Y       +D +            K P
Sbjct: 135 PYCVG-CEEY-KLPGELLDGEGEYAGQKLCPIHKKP 168


>gi|304396521|ref|ZP_07378402.1| isoleucyl-tRNA synthetase [Pantoea sp. aB]
 gi|304356030|gb|EFM20396.1| isoleucyl-tRNA synthetase [Pantoea sp. aB]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN +   +++           A ++RL 
Sbjct: 576 ISTAMKGQAPYRQVLTHGFTVDGQGRKMSKSIGNTVAPQDVMNKLG-------ADILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  +     +   T+ 
Sbjct: 629 VASTDYSGEMAVSDEILKRSADAYRRIRNTAR 660


>gi|296271958|ref|YP_003654589.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096133|gb|ADG92083.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 530

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 3/82 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID-DKIIERARQEHPSIP 91
           PT     HIG+AR  I  D L R+ R+   +    Y  N      D +            
Sbjct: 116 PT--GPLHIGHARGAIFGDTLARVGRHLGYDVQTEYYINDAGAQMDMLGLSVSLAGREFL 173

Query: 92  INDAISIITSKNTQQFVKDTTR 113
           +N+ +    S    +++ D  +
Sbjct: 174 LNETVEYPESYYRGEYLVDIAK 195


>gi|120602218|ref|YP_966618.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|120562447|gb|ABM28191.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 663

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 40/181 (22%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H    D++ PH          A  +E   N+ +H  +L +   KMSKS GN ++  E+++
Sbjct: 255 HLVAKDILKPHAVFWPTMLKAA-GLEPYNNLNVHGYWL-VRDTKMSKSLGNVVSPLEMID 312

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-----TEAEILLSKWP--------- 338
                   +     R  +L   H+     F+ + L      +    L             
Sbjct: 313 R-------YGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGNLYSRVLSMTAK 365

Query: 339 ----------QTSTSKGIIDPAVLSALYNDLN------TVSAIQALHKLARESTKNHDLL 382
                       +     +    + A  N  N        +A+++L +L R   K  D  
Sbjct: 366 YFGGVVPAPGAYTEEDETLRALAVEAQRNFCNLFGRVRFSNALESLWELVRALNKYVDSA 425

Query: 383 P 383
            
Sbjct: 426 A 426



 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D + R  R     K   ++    +  DKI++ A +         
Sbjct: 13  VNAKPHLGHAYTTIVADSMRRFQRLLG--KDTYFLTGTDEHGDKIVQAAEK------AGV 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN--N 150
           +        + QF      L         R T   H   +   +Q +  +G  Y      
Sbjct: 65  SPKDFVDGVSGQFRDLWPHLGVEY-DQFIRTTDPEHKKVVQAFLQRVYDNGDIYFGEYGG 123

Query: 151 EIIFDTSSI 159
              +     
Sbjct: 124 HYCYGCERF 132


>gi|94266428|ref|ZP_01290123.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93452970|gb|EAT03469.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 11/117 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D + R  R    E  V +     +  DKI+  A++         
Sbjct: 12  VNAQPHLGHAYTGVVADTVARFARLDGEE--VFFQTGTDEHGDKIVGAAKE------AEV 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
            +     + +  F +    L    P +  R T+  HI  + +++Q +   G  Y ++
Sbjct: 64  DLREYVDRISALFRQAWPLLEVE-PDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSD 119



 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A  +     + +H  + N+   KMSKS GN +   +++E        + A  +R  +L
Sbjct: 273 AMGLPPYRRLHVHGYW-NVNEAKMSKSIGNVVRPQDMVE-------QFGADTVRYFLL 322


>gi|57168053|ref|ZP_00367192.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020427|gb|EAL57096.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 497

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 75/404 (18%), Positives = 133/404 (32%), Gaps = 79/404 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 82  PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 137

Query: 92  --INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP--------QMIYLIQNIIL 141
             +++ +         +++ D  + A      +  +  +IP        +M+ LI+  + 
Sbjct: 138 SILHENVEYPEQYYKGEYIADLAKEAFEKFGKEFFSEENIPSLADWAKDKMLVLIKQNLE 197

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST--- 198
                +A  +I    S    Y +     ++  K    + E+  K       +W  S+   
Sbjct: 198 -----QAKIKIDNYVSERSYYDAL-NATLESLKEHKGIYEQEGK-------IWLASSLKG 244

Query: 199 -PMEPGWESPWGRGRPGWHIECSA--------MSSHYLGKVFDIHGGGLDLIFPHHENEI 249
              +       GRG        +A        MS  Y GK  +I G       P  +   
Sbjct: 245 DEKDRVIIREDGRG-----TYLAADIVYHKDKMSRGY-GKCINIWGADHHGYIPRMK--A 296

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           A             I      L  +G   KMSK  GNFI ++++++          +  +
Sbjct: 297 AMEFLGFDSNNLEIILAQMVSLLKDGEPYKMSKRAGNFILMSDVVDEIG-------SDAL 349

Query: 308 RLAMLMTHYREPIDFTVQRLTE------------AEILLSK-WPQTSTSKGIIDPAVLSA 354
           R   L       ++F +  L +            A   + + + +       +  A L +
Sbjct: 350 RYIFLSKKCDTHLEFDISDLQKEDSSNPVYYINYAHARIHQVFAKAGKKIDDVMKADLQS 409

Query: 355 LYND--------LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           L  D        LN  + +    + AR   K  D L    A+ H
Sbjct: 410 LNQDGVNLLFEALNLKAVLNDAFE-ARALQKIPDYLKNLAANFH 452


>gi|289523254|ref|ZP_06440108.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503797|gb|EFD24961.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 823

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N+ +  G +  +G KMSKS G
Sbjct: 525 PVDQYIGGIEHACLHLIYSRFFTKVLADMGMIRFREPFVNL-LTQGMVIKDGAKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++       + + A   RL +L  +   + ++++ Q +      LS+ W    
Sbjct: 584 NVVDPDDII-------KRYGADTARLFILFASPPDKDLEWSDQGVEGVYRFLSRVWRYME 636

Query: 342 TSKGIIDPA 350
                +  A
Sbjct: 637 DKIEDLKKA 645



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 50/185 (27%), Gaps = 24/185 (12%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D++ R L        V +              A      I  
Sbjct: 40  PYPSGALHMGHLRNYSIGDLMARFLTMRGYN--VLHPMGFDAFGLPAENAA------IKY 91

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T  N ++       + C     +  AT H P      Q         G AY A
Sbjct: 92  GVHPFEWTWNNIERMTAQLKSMGCSYDWRRRIATCH-PDYYRWNQWFFLKFYEEGLAYRA 150

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRST------PM 200
              I +  S        +  ++ E     R   +  KK    + L   K +         
Sbjct: 151 EAPINWCPSCKT---VLANEQVIEGGHCWRCGSEVTKKKLKQWFLSITKYAQELLDSLED 207

Query: 201 EPGWE 205
            PGW 
Sbjct: 208 LPGWP 212


>gi|259417786|ref|ZP_05741705.1| isoleucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259346692|gb|EEW58506.1| isoleucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 989

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+          N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 642 QASATKGRAPYRNVVTHGFTLDEKGMKMSKSLGNTIVPEEIV-------KQYGADILRLW 694

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 695 VAQTDYTADQRIGAEILKGTADSYRRLRNT 724


>gi|294898458|ref|XP_002776246.1| leucyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
 gi|239883112|gb|EER08062.1| leucyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
          Length = 177

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 31/79 (39%), Gaps = 9/79 (11%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
             G DLI  H    +                 +  NG + ++  KMSKS GNF+T+++  
Sbjct: 73  CSGKDLIPNHLTMCLYSHAAIWEDRPDLWPQAFFTNGHVMVDDEKMSKSRGNFLTLDQAC 132

Query: 293 ETKKFGGRSWPAPVIRLAM 311
                    + A   RLA+
Sbjct: 133 G-------EFSADATRLAL 144


>gi|242310404|ref|ZP_04809559.1| isoleucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522802|gb|EEQ62668.1| isoleucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 912

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +      +I  H   ++  G KMSKS GN I   E+L       + + + ++RL +
Sbjct: 574 SCAVNEKAPYKSILTHGFTMDENGEKMSKSKGNVIVPKEVL-------KEFGSEILRLWV 626

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            M+ Y+     +   L +      K   T
Sbjct: 627 AMSDYQNDQRISQNILKQVGENYRKIRNT 655


>gi|229162831|ref|ZP_04290788.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228620713|gb|EEK77582.1| Isoleucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 913

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|253702345|ref|YP_003023534.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
 gi|251777195|gb|ACT19776.1| isoleucyl-tRNA synthetase [Geobacter sp. M21]
          Length = 925

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H + +A S          N+  H   ++  GRKMSKS GN +   +++       + +  
Sbjct: 571 HSSLLA-SVGTRGRAPYKNVLTHGFVMDGAGRKMSKSVGNVVAPEDVI-------KKFGG 622

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            V+RL +    YR+ +  + + LT       +   T
Sbjct: 623 DVLRLWVAAQDYRDDLRISQEILTRLSESYRRIRNT 658


>gi|206976763|ref|ZP_03237667.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961316|ref|YP_002339884.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097341|ref|YP_002531398.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782366|sp|B7HLM9|SYI_BACC7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782367|sp|B9IVX2|SYI_BACCQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|206745073|gb|EDZ56476.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217068263|gb|ACJ82513.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241399|gb|ACM14109.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|77359865|ref|YP_339440.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|84029560|sp|Q3IEA2|SYI_PSEHT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76874776|emb|CAI85997.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 942

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   L    D++  G D       + +  S   +       +  H   ++  GRKM
Sbjct: 550 CVVDAREDLTGPADLYLEGSDQHRGWFMSSMMTSVAINGHAPYRQVLTHGFTVDENGRKM 609

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I+   ++           A ++RL +  T Y   +  + +    +     +  
Sbjct: 610 SKSLGNVISPQNVMNKLG-------ADILRLWVASTDYTAEMTVSDEIFNRSADRYRRIR 662

Query: 339 QTST 342
            TS 
Sbjct: 663 NTSR 666


>gi|159903416|ref|YP_001550760.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|238687104|sp|A9BAE4|SYL_PROM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|159888592|gb|ABX08806.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 872

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 44/159 (27%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R       V +              A      I  
Sbjct: 56  PYPSGNLHMGHVRNYVITDVIARVHRMKGF--SVLHPMGWDAFGLPAENAA------IER 107

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
           N    I T KN         RL  L+       T    +     Q     +   G AY+ 
Sbjct: 108 NIQPDIWTEKNISHMRSQLDRLG-LSIDWDREQTTSKSEYYKWTQSIFLKLYEAGLAYQK 166

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           +  +              +  ++D      R      KK
Sbjct: 167 SATVNWDPVDKT----VLANEQVDADGKSWRSGALVEKK 201


>gi|47570310|ref|ZP_00240957.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553019|gb|EAL11423.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|312866233|ref|ZP_07726452.1| leucine--tRNA ligase [Streptococcus downei F0415]
 gi|311098206|gb|EFQ56431.1| leucine--tRNA ligase [Streptococcus downei F0415]
          Length = 833

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +       T+ + G +D             + A+    NT  AI +L      + K
Sbjct: 662 DRVYRLLTTKDITADNDGKLDKVYNETVKSVTEQIEAM--KFNT--AIASLMVFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 GKAL 721


>gi|229140544|ref|ZP_04269099.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228643105|gb|EEK99381.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 913

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|149203918|ref|ZP_01880886.1| isoleucyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149142360|gb|EDM30405.1| isoleucyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 983

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/179 (13%), Positives = 53/179 (29%), Gaps = 16/179 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   E++       + + A ++RL 
Sbjct: 637 QACGTRGRAPYRGVLTHGFTLDEKGNKMSKSLGNTVAPEEVV-------KQYGADILRLW 689

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-NDLNTVSA----- 364
           +    Y   +    + L        +   T             A   +            
Sbjct: 690 VAQADYTADLRIGPEILKGVADGYRRLRNTLRFMLGALAPFTEADRVDPAEMPELERWVL 749

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLILL 420
             +  L    ++  + +D   +F    +   +++   + +        +     R    
Sbjct: 750 HRLAELDHKVKKGYETYDFQGVFQQIFNFCTLDLSAFYFDIRKDALYCDGDTARRRAAR 808


>gi|187925353|ref|YP_001896995.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187716547|gb|ACD17771.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 944

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 130 HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAKW 181

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 182 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 240


>gi|284044106|ref|YP_003394446.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948327|gb|ADB51071.1| valyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 854

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 78/198 (39%), Gaps = 22/198 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+     D++F      I             +++IH+     +GR+MSKS G  I   + 
Sbjct: 475 DVLSTARDILFLWVARMIMMGLEFAGEVPFRDVYIHSVIQAPDGRRMSKSLGTGIDPLDE 534

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPA 350
           +E+    G       +R  +L     + + ++ +++ + + L +K W  +      IDP 
Sbjct: 535 IESHGADG-------VRFGLLAMSSSQDVRYSAEKVQQGQQLANKLWNASRLVLTRIDPE 587

Query: 351 VLSALYNDLNTVSAIQ---ALHKLARESTKNHDLLPIFNASAHILGI------EVCKEHL 401
              A     +   A++    L +LA    +  + +  ++ S  +LG+      E+C  +L
Sbjct: 588 ARPA-----SRPQAVEDRWILSRLAHTRAEVAERIEAYDFSHAVLGLYDFVYGELCDWYL 642

Query: 402 NKNISIAIEKLVQERLIL 419
                   E   QER  L
Sbjct: 643 ELVKPRLYEAEGQERDDL 660


>gi|254468593|ref|ZP_05081999.1| methionyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207087403|gb|EDZ64686.1| methionyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 675

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 70/191 (36%), Gaps = 27/191 (14%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM--T 314
              K   I+ H GFL + G KMSKS G FIT    L              +R        
Sbjct: 309 GFRKPTKIFAH-GFLTVNGEKMSKSRGTFITARSFLNNIN------EPEFLRYYFASKLN 361

Query: 315 HYREPIDFTVQRLTEAEI--LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
                ID  +  L       L+ K     +         +  L+N       I+++ +LA
Sbjct: 362 DSMSDIDLNLDDLMSKVNSDLVGKLVNIPSRTFG----FIHKLFN-----GKIKSIDQLA 412

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK-FSSADYI 431
            +S  +  ++   +  + IL  ++ +  L   +   +  LV+E   L+  ++ +S A   
Sbjct: 413 SDSKYSQLVIKSIDLKSEIL--DLYESRLYSQLVRKVFTLVEEVNELISDEQPWSLA--- 467

Query: 432 RKQLESKGFIL 442
            K LE     L
Sbjct: 468 -KDLEQNKVQL 477


>gi|94263063|ref|ZP_01286882.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93456606|gb|EAT06714.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 507

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 11/117 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D + R  R    E  V +     +  DKI+  A++         
Sbjct: 12  VNAQPHLGHAYTGVVADTVARFARLDGEE--VFFQTGTDEHGDKIVGAAKE------AEV 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
            +     + +  F +    L    P +  R T+  HI  + +++Q +   G  Y ++
Sbjct: 64  DLREYVDRISALFRQAWPLLEVE-PDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSD 119



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A  +     + +H  + N+   KMSKS GN +   +++E        + A  +R  +L
Sbjct: 273 AMGLPPYRRLHVHGYW-NVNEAKMSKSIGNVVRPQDMVE-------QFGADTVRYFLL 322


>gi|91785203|ref|YP_560409.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123358460|sp|Q13U82|SYL_BURXL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91689157|gb|ABE32357.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 863

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|116513817|ref|YP_812723.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
 gi|116093132|gb|ABJ58285.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC BAA-365]
          Length = 879

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 51/130 (39%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ +H    + 
Sbjct: 460 GWPDEDSADFKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTGERPFDNVVLHGLIRDE 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   +++         + A  +R  +L  T   +   F+  ++  A  
Sbjct: 518 QGRKMSKSLGNGIDPMDVIA-------KYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN 570

Query: 333 LLSKWPQTST 342
            ++K    S 
Sbjct: 571 FINKLWNASR 580


>gi|239905442|ref|YP_002952181.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239795306|dbj|BAH74295.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 651

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D L R  R     + V ++    +  DKI E A +         
Sbjct: 13  VNAKPHLGHAYTTIVADALARFHRLCG--EDVFFLTGTDEHGDKIAEAAAK------AGQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEI 152
                    +  F      L    PT   R   T+HI  +   +Q +   G  Y      
Sbjct: 65  TPKEYADAISGLFSSLWPDLGI-TPTRFIRTTDTDHIDAVRRALQLVYDKGDIYFGEYGG 123

Query: 153 IFDT 156
            + T
Sbjct: 124 HYCT 127


>gi|256070041|ref|XP_002571359.1| leucyl-tRNA synthetase [Schistosoma mansoni]
 gi|238652576|emb|CAZ39044.1| leucyl-tRNA synthetase, putative [Schistosoma mansoni]
          Length = 1209

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 57/171 (33%), Gaps = 32/171 (18%)

Query: 204 WESPW-GRGRP------GWHIECSAMSSHYLGKVF------DIHGGGLDLIFPHHENEIA 250
           W+  + G G P        H   S      L K F      D+   G DLI  H    + 
Sbjct: 634 WDYIFLGIGDPDDLVKINRHSSLSVPILKRLRKEFLFWYPVDLRVSGKDLISNHLTYYLY 693

Query: 251 QSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
                   E          NG L L   KMSKS GNF+T+ + +E        + A  +R
Sbjct: 694 NHTAIWPNEPNLWPRNIRANGHLLLNSNKMSKSTGNFLTLADAVE-------KYSADGVR 746

Query: 309 LAMLMTHYREPIDFTVQRLTE--AEILLSKWPQTSTSKGIIDPAVLSALYN 357
           LA+      + +D     + E  AE  L +               L  L +
Sbjct: 747 LALADAG--DSLD--DANVKEEMAEAGLLRLYSLL----DWFNMTLEILND 789


>gi|95928499|ref|ZP_01311246.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
 gi|95135289|gb|EAT16941.1| isoleucyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
          Length = 930

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 15/165 (9%)

Query: 223 SSHYLGKVFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           +  YL    D++  G D      H + +A +     +     +  H   ++  GRKMSKS
Sbjct: 548 NRDYLDSPADLYLEGSDQHRGWFHSSLLA-AVGTRGVAPYKAVLTHGFVVDGNGRKMSKS 606

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GN +  + ++         + A V+RL +    Y++ I  + + L        +   T+
Sbjct: 607 QGNVVAPDAVIN-------KFGAEVLRLWVAAQDYQDDIRISQEILQRLSDAYRRIRNTA 659

Query: 342 ----TSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
               ++    DPA  S    DL  +   A+  L  L     K ++
Sbjct: 660 RYILSNIYDFDPATDSVADGDLLELDRWALSRLESLVGRVEKAYN 704


>gi|320547802|ref|ZP_08042086.1| leucine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447562|gb|EFW88321.1| leucine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 833

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVER-------YGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K ++                     L A+    NT  AI  L      + K
Sbjct: 662 DRVYRLLTTKEVVAENNGNLDKVYNETVKAVTEQLEAM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              L   +      L +     HL++ +
Sbjct: 718 EDKLFADYAKGFVQL-LAPFAPHLSEEL 744


>gi|270263902|ref|ZP_06192170.1| isoleucyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042095|gb|EFA15191.1| isoleucyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++             ++RL 
Sbjct: 576 ISTAMKGKAPYKEVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|238898020|ref|YP_002923700.1| isoleucine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229465778|gb|ACQ67552.1| isoleucine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 955

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A + RL +
Sbjct: 583 SAAMKNKAPYKEVLTHGFVVDGQGRKMSKSIGNTVAPQDVTNKLG-------ADIFRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
             T Y   +  + + L  +     +   T+     +    DPA
Sbjct: 636 ASTDYTSEMAVSDEILQHSADAYRRIRNTARFLLANLKDFDPA 678


>gi|228987040|ref|ZP_04147165.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229157474|ref|ZP_04285551.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228625924|gb|EEK82674.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|228772634|gb|EEM21075.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 913

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|301055386|ref|YP_003793597.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300377555|gb|ADK06459.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|167636430|ref|ZP_02394729.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688822|ref|ZP_02880025.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254683395|ref|ZP_05147255.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254739817|ref|ZP_05197510.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528172|gb|EDR90959.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667177|gb|EDT17937.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|196035856|ref|ZP_03103258.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218905025|ref|YP_002452859.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228928944|ref|ZP_04091976.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228947615|ref|ZP_04109905.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|229123409|ref|ZP_04252613.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|254782362|sp|B7JJY2|SYI_BACC0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|195991505|gb|EDX55471.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|218537446|gb|ACK89844.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|228660185|gb|EEL15821.1| Isoleucyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228812135|gb|EEM58466.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228830751|gb|EEM76356.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|163794895|ref|ZP_02188864.1| Isoleucyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
 gi|159179714|gb|EDP64241.1| Isoleucyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
          Length = 936

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN     E+++        + A ++RL +
Sbjct: 586 SCGTRGRAPYDAVLTHGFVLDQDGRKMSKSLGNVTAPQEVMD-------KYGADILRLWV 638

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + + Y E +    + L        +   T
Sbjct: 639 VSSDYSEDLRIGPEILKHQADHYRRLRNT 667


>gi|118479116|ref|YP_896267.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118418341|gb|ABK86760.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 923

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 570 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 623 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 673

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 674 LREVDRYMLVKLNDLITKVKEA 695


>gi|296160453|ref|ZP_06843269.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295889202|gb|EFG69004.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 863

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|254721429|ref|ZP_05183218.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|229092941|ref|ZP_04224074.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228690445|gb|EEL44229.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 913

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|229186136|ref|ZP_04313305.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|228597312|gb|EEK54963.1| Isoleucyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|222529245|ref|YP_002573127.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222456092|gb|ACM60354.1| leucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 817

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 22/136 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  +++E        + A   RL +L        ++++ Q +      L++  +   
Sbjct: 585 NIVSPEDIVER-------YGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 343 SKGIIDPAVLSALYND 358
                   +   L +D
Sbjct: 638 -------ELKDKLADD 646


>gi|196045913|ref|ZP_03113142.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225865877|ref|YP_002751255.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|254782364|sp|C1EPQ9|SYI_BACC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|196023353|gb|EDX62031.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789418|gb|ACO29635.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|126733331|ref|ZP_01749078.1| isoleucyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716197|gb|EBA13061.1| isoleucyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 963

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 15/121 (12%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M+  YL    D H G          + + Q+C          +  H   L+ +G KMSKS
Sbjct: 597 MADLYLEGT-DQHRGWFH-------SSMLQACGTMGHAPYRGVLTHGFTLDQKGMKMSKS 648

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GN I   +++       + + A ++RL +  + Y   +    + L        +   T 
Sbjct: 649 IGNTIAPEQVV-------KQYGADILRLWVAQSDYTADLRIGDEILKGVADSYRRLRNTV 701

Query: 342 T 342
            
Sbjct: 702 R 702


>gi|114566494|ref|YP_753648.1| isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122318441|sp|Q0AYC7|SYI_SYNWW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114337429|gb|ABI68277.1| Isoleucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 927

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 50/135 (37%), Gaps = 13/135 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +GRKMSKS GN +             R   A ++RL +
Sbjct: 573 AVAIRGAAPYREVLTHGFVVDEQGRKMSKSLGNVV-------DPLRMTREMGADILRLWV 625

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AI 365
               YR  +  +   + ++     K   T      +    DP      Y+ L+ +   A+
Sbjct: 626 SSADYRNDVSVSPNIIKQSAEAYRKIRNTCRFILGNLFDFDPGKERVSYDKLSELDQWAL 685

Query: 366 QALHKLARESTKNHD 380
             L KL R  TK ++
Sbjct: 686 LKLDKLIRRVTKAYE 700


>gi|52141594|ref|YP_085236.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824207|sp|Q636D1|SYI1_BACCZ RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|51975063|gb|AAU16613.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|49481690|ref|YP_037957.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|196038708|ref|ZP_03106016.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|81395073|sp|Q6HER9|SYI1_BACHK RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|49333246|gb|AAT63892.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|196030431|gb|EDX69030.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|42782988|ref|NP_980235.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409428|sp|Q732H4|SYI1_BACC1 RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|42738915|gb|AAS42843.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|30263897|ref|NP_846274.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529327|ref|YP_020676.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49186745|ref|YP_029997.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321224|ref|ZP_00394183.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872280|ref|ZP_02216917.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641124|ref|ZP_02399379.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708818|ref|ZP_02899254.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177654920|ref|ZP_02936637.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190565901|ref|ZP_03018820.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227813195|ref|YP_002813204.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229604270|ref|YP_002868131.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254735935|ref|ZP_05193641.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751007|ref|ZP_05203046.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254757935|ref|ZP_05209962.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81583658|sp|Q81WE4|SYI1_BACAN RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782360|sp|C3P665|SYI_BACAA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782361|sp|C3L730|SYI_BACAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|30258541|gb|AAP27760.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47504475|gb|AAT33151.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49180672|gb|AAT56048.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164711956|gb|EDR17496.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510904|gb|EDR86295.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126303|gb|EDS95194.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172080431|gb|EDT65518.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562820|gb|EDV16786.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227002605|gb|ACP12348.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229268678|gb|ACQ50315.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 921

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|312127683|ref|YP_003992557.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777702|gb|ADQ07188.1| leucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 817

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  +++E        + A   RL +L        ++++ Q +      L++  +   
Sbjct: 585 NIVSPEDIVE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 343 SKGIIDPAVLSALYND 358
                   + + L +D
Sbjct: 638 -------ELKNKLADD 646


>gi|300715262|ref|YP_003740065.1| Isoleucyl-tRNA synthetase 1 [Erwinia billingiae Eb661]
 gi|299061098|emb|CAX58205.1| Isoleucyl-tRNA synthetase 1 [Erwinia billingiae Eb661]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 48/144 (33%), Gaps = 23/144 (15%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++             ++RL 
Sbjct: 576 ISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSA 364
           +  T Y   +  + + L  +     +   T+          L A  N  N          
Sbjct: 629 VASTDYSGEMAVSDEILKRSADSYRRIRNTAR--------FLLANLNGFNPETDSVKPEE 680

Query: 365 IQALHKLA--RESTKNHDLLPIFN 386
           +  L + A  R      D+L  + 
Sbjct: 681 MVVLDRWAVGRAKAAQDDILASYE 704


>gi|289547973|ref|YP_003472961.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181590|gb|ADC88834.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 489

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 39/124 (31%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  D L R  R    E        +T  D+  ++    +  +     
Sbjct: 12  VNDVPHIGHAYTTVAADTLARFYRMRGYEVFF-----LTGTDEHGLK---IQKTAEEKGV 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N   F++    +         R T  +H   +  + Q     G  Y    E 
Sbjct: 64  HPKDLADQNASNFMELWRFMNISY-DRFIRTTDPDHQEVVREMFQKSWERGDIYLGEYEG 122

Query: 153 IFDT 156
            +  
Sbjct: 123 WYCV 126


>gi|228916533|ref|ZP_04080099.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228843112|gb|EEM88194.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 913

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|228935211|ref|ZP_04098037.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228824376|gb|EEM70182.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 913

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     NTV A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSENTV-AVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|124025701|ref|YP_001014817.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|189083137|sp|A2C242|SYL_PROM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123960769|gb|ABM75552.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 862

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 46/158 (29%), Gaps = 16/158 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DVL R  R       V +              A      I  
Sbjct: 51  PYPSGSLHMGHVRNYVITDVLARYKRMKGLN--VLHPMGWDSFGLPAENAA------IER 102

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
             + S  T KN  Q      RL  L+       T          Q     +  +  AY+ 
Sbjct: 103 ETSPSTWTDKNISQMKDQLDRLG-LSIDWSKEVTTCKEDYYKWTQYIFNQLHKNNLAYQK 161

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              + +D          +  ++D +    R   K  KK
Sbjct: 162 KATVNWDPIDQT---VLANEQVDAEGKSWRSGAKVEKK 196


>gi|86608501|ref|YP_477263.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86557043|gb|ABD02000.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 942

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 13/152 (8%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D      ++ +  S   +       +  H   L+ +G+KMSKS GN I
Sbjct: 556 LGYPVDLYLEGSDQHRGWFQSSLLTSVAVNGHAPYKAVLTHGFVLDEKGQKMSKSLGNVI 615

Query: 287 TINELLETKKF--GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
               L+   K      ++ A V+RL +    Y   +      L +   +  K   T+   
Sbjct: 616 DPLVLINGGKDPQTDPAYGADVLRLWVSSVDYSGDVPLGKTILGQMADVYRKIRNTAR-- 673

Query: 345 GIIDPAVLSALYNDLN-TVSAI--QALHKLAR 373
                 +LS LY D N T  A+   AL +L R
Sbjct: 674 -----FLLSNLY-DFNPTQDAVPFAALTELDR 699


>gi|238752262|ref|ZP_04613742.1| Isoleucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238709530|gb|EEQ01768.1| Isoleucyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 629 VASTDYSGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPA 672


>gi|298529104|ref|ZP_07016507.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298510540|gb|EFI34443.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 640

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 19/132 (14%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D + RL R    +K   ++    +  DKI+E A +         
Sbjct: 13  VNARPHLGHAYTTIVADSINRLHRLR--QKDTFFLTGTDEHGDKIVEAAEKNGL------ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
           A      + +  F +    L     +   R T+  P+ +  +Q  +     YE N +I  
Sbjct: 65  APKEYADRISALFKEAWPWLEVEN-SAFIRTTD--PEHVKCVQRFLN--TVYE-NGDIY- 117

Query: 155 DTSSIPNYGSFS 166
                  YG   
Sbjct: 118 ----FGEYGGHY 125


>gi|156843868|ref|XP_001644999.1| hypothetical protein Kpol_1072p11 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156115654|gb|EDO17141.1| hypothetical protein Kpol_1072p11 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 1094

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 31/146 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 685 PLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNAKMSKSTGNFMTLQ 744

Query: 290 EL-------------------LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +L                   +E   F   +  A ++RL  L        ++  + + + 
Sbjct: 745 QLVEKFGADASRIALADAGDSVEDANFDESNANAAILRLFNLK-------EWAEEVVNDI 797

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALY 356
             L     +T    G  D A    + 
Sbjct: 798 SNL-----RTGPITGFFDLAFEHEMN 818


>gi|325294665|ref|YP_004281179.1| methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065113|gb|ADY73120.1| Methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 525

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 43/120 (35%), Gaps = 14/120 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A      D++ R  R+    + V ++    +   KI + A +         
Sbjct: 13  VNDIPHLGHAYTTTAADIVARFNRFLG--RDVFFLTGTDEHGQKIQQAAEKR------GM 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
                      +F +   +L      H  R T+  P+ I  +Q I      YE N +I  
Sbjct: 65  TPKEFVDTLVPKFKELWEKLNISY-DHFIRTTD--PEHIKAVQYIFKK--CYE-NGDIYL 118



 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +E    ++ H G+  + G KMSKS GN     E+
Sbjct: 252 DLHLVGKDILRFHTVYWPAFLMSA-GLEIPKRVFAH-GWWTVNGEKMSKSKGNVANPFEI 309

Query: 292 LETKKFGGRSWPAPVIRLAM 311
           +E        +    +R  +
Sbjct: 310 IE-------KFGVDQVRFFL 322


>gi|307103633|gb|EFN51891.1| hypothetical protein CHLNCDRAFT_56341 [Chlorella variabilis]
          Length = 905

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 68/195 (34%), Gaps = 33/195 (16%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D++F      I              +++H    + +GRKMSKS GN +   E +   
Sbjct: 489 TGHDILFFWVARMIMMGLECTGRPPFHTVYLHGLVRDEKGRKMSKSLGNVVDPVETI--- 545

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST----SKGIID 348
               + + A  +R  +       P   ++ ++ R+  +    +K          + G  D
Sbjct: 546 ----QQYGADALRFTLATG--TSPGQDLNLSLDRVNASRNFTNKLWNAGKFVLFNLGEAD 599

Query: 349 PAVLSALYN-DLNTVSA-----------IQALHKLARESTKNHDLLPIFNASAHILGIEV 396
            A    L   DL++ +A           + ALH+  R+ T  H+    F  +  +L    
Sbjct: 600 DAEWQRLATADLSSSAATAGLALPERWVVSALHRAVRDITAAHERFD-FGEAGRLL---- 654

Query: 397 CKEHLNKNISIAIEK 411
                +      IE 
Sbjct: 655 YDFVWSDFADWYIEA 669


>gi|302871944|ref|YP_003840580.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574803|gb|ADL42594.1| leucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 817

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAILHLLYSRFFTKVLYDLGYVPFEEPFKNL-LTQGMVLKDGAKMSKSLG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  +++E        + A   RL +L        ++++ Q +      L++  +   
Sbjct: 585 NIVSPEDIVE-------KYGADTARLFILFAAPPERDLEWSDQGVEGCFRFLNRLWRLYI 637

Query: 343 SKGIIDPAVLSALYND 358
                   + + L +D
Sbjct: 638 -------ELKNKLADD 646


>gi|260425995|ref|ZP_05779974.1| isoleucyl-tRNA synthetase [Citreicella sp. SE45]
 gi|260420487|gb|EEX13738.1| isoleucyl-tRNA synthetase [Citreicella sp. SE45]
          Length = 1000

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 654 QACGTMGRAPYRNVVTHGFTLDEKGNKMSKSLGNTIVPEEVV-------KQYGADILRLW 706

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 707 VAQTDYTADQRIGPEILKGVADSYRRLRNT 736


>gi|225868079|ref|YP_002744027.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225701355|emb|CAW98405.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 883

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    +     Y   
Sbjct: 424 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++ET       + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DIIET-------YGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|57167838|ref|ZP_00366978.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020960|gb|EAL57624.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 628

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E  +     +T  D+      + E  +   N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHETRL-----LTGTDEH---GQKIEQAAKIRNS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  H+  +  +   +   G  Y  E   
Sbjct: 63  TPKEYADKISSEFKKLWDEFEITY-DIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 122 HYCISCESF 130


>gi|238755524|ref|ZP_04616863.1| Isoleucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238706280|gb|EEP98658.1| Isoleucyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 938

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  +++             ++RL 
Sbjct: 576 IATAIKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQDVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   I  + + L  +     +   T+ 
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTAR 660


>gi|288574650|ref|ZP_06393007.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570391|gb|EFC91948.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 646

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 62/189 (32%), Gaps = 44/189 (23%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-M 313
           A  +     ++ H G+  +EG KMSKS GN +   E+++        + A   R  +L  
Sbjct: 277 ALGLNPPVGVFSH-GWWTMEGEKMSKSKGNVVDPFEMVDL-------YGADAFRYFLLRQ 328

Query: 314 THYREPIDFTVQRLTE---------AEILLSKW---------------PQTSTSKGIIDP 349
             +    DF+   + +            LLS+                   S     +  
Sbjct: 329 VPFGMDGDFSEAAMAQRINSDLANDLGNLLSRTVSMVLKYRDGIVPSPSDLSPLDIELSE 388

Query: 350 AVLSALY------NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
               AL       +D     A++A   L   + K  D           LG E  KE L+ 
Sbjct: 389 VARKALDTYREKMDDFTFDEALKAAWGLIGRANKYID-----ETMPWKLGNEGSKEPLDA 443

Query: 404 NISIAIEKL 412
            +   +E L
Sbjct: 444 VLWGLVESL 452



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  DV+ R  R    +  V ++    +   KI E A+ +        
Sbjct: 16  VNDVPHIGHAYTTIGADVMSRYKRMDGYK--VFFLTGTDEHGQKIYESAKAK------GM 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +T +  + F +    L         R T   H   +  +   ++  G  Y+   + 
Sbjct: 68  TAQELTDEMAENFKRLLPVLNISNDDF-IRTTEKRHERVVQSIFSKLMDQGDIYKGTYKG 126

Query: 153 IFDT 156
           ++  
Sbjct: 127 LYCV 130


>gi|146292162|ref|YP_001182586.1| isoleucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
 gi|166229770|sp|A4Y4A4|SYI_SHEPC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145563852|gb|ABP74787.1| Isoleucyl-tRNA synthetase [Shewanella putrefaciens CN-32]
          Length = 940

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I    +            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DPA       DL  V  + AL +    R +    +++  ++ 
Sbjct: 666 LANLNGFDPAK------DLVAVEDMVALDRWVVRRAAALQQEIIEAYDQ 708


>gi|119500964|ref|XP_001267239.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119415404|gb|EAW25342.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 572

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 46/149 (30%), Gaps = 10/149 (6%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
                +     R+   G       H+G+   M++ D+L R  R   G+K    +   TD 
Sbjct: 43  EPLSTLCGPQRRICTDGIDFLKAPHVGHFYTMVITDILKRW-RVLLGDKDAQLLTG-TD- 99

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMI 133
                   + +  +             N + F             H  R T+  H   + 
Sbjct: 100 ----EHGMKIQQAASAAGMDPQAFCDMNCKTFQALAKAANVDY-DHFIRTTDPAHKEAVQ 154

Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNY 162
           Y  + +   G+ Y A +E  +  S    Y
Sbjct: 155 YFWEMLNHRGYIYTAKHEGWYSVSDETFY 183


>gi|2160156|gb|AAB60719.1| Strong similarity to S. pombe leucyl-tRNA synthetase (gb|Z73100)
           [Arabidopsis thaliana]
 gi|227202584|dbj|BAH56765.1| AT1G09620 [Arabidopsis thaliana]
          Length = 1084

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 56/195 (28%), Gaps = 49/195 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG + L   KMSKS GNF T+ 
Sbjct: 668 PLDLRVSGKDLIQNHLTFFIYNHTALMANRNWPRGIRCNGHIMLNSEKMSKSTGNFRTLR 727

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E     G        R  +                                 G+ D 
Sbjct: 728 QSIEEFSATGT-------RFCL----------------------------ADAGDGVDDA 752

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
                      T +A  A+ +L +E T   ++L + ++    L       + +K     +
Sbjct: 753 NFA------FETANA--AILRLTKELTWMEEVLDVESS----LRTGPPSTYADKVFENDM 800

Query: 410 EKLVQERLILLKMKK 424
              +  RL     K 
Sbjct: 801 N--IALRLTERAYKD 813


>gi|120599901|ref|YP_964475.1| isoleucyl-tRNA synthetase [Shewanella sp. W3-18-1]
 gi|166229772|sp|A1RMM6|SYI_SHESW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120559994|gb|ABM25921.1| Isoleucyl-tRNA synthetase [Shewanella sp. W3-18-1]
          Length = 940

 Score = 46.8 bits (110), Expect = 0.008,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I    +            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DPA       DL  V  + AL +    R +    +++  ++ 
Sbjct: 666 LANLNGFDPAK------DLVAVEDMVALDRWVVRRAAALQQEIIEAYDQ 708


>gi|254704289|ref|ZP_05166117.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261754957|ref|ZP_05998666.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261744710|gb|EEY32636.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNNSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|219123327|ref|XP_002181978.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217406579|gb|EEC46518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 574

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 45/150 (30%), Gaps = 19/150 (12%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
              FQ   P    +Y     V D  HIG+A      DV+ R +R    +    +  + TD
Sbjct: 59  KRPFQITTP----IYY----VNDKPHIGHAYTSTACDVIARFMRLSGRD---VFFLSGTD 107

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQM 132
                    + E  +   N        + +  F +    +         R T  +H   +
Sbjct: 108 -----EHGEKVEQSAEKQNMDPQGFVDQVSVNFRELLELMNISN-DKFIRTTSEDHKKSV 161

Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIPNY 162
            +    ++  G+ Y       +       Y
Sbjct: 162 QHFWNVMVEKGYIYMGTYSGWYSVRDECFY 191


>gi|161618949|ref|YP_001592836.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260566464|ref|ZP_05836934.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|161335760|gb|ABX62065.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|260155982|gb|EEW91062.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 515

 Score = 46.8 bits (110), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNNSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|322392591|ref|ZP_08066051.1| leucine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144583|gb|EFX39984.1| leucine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 833

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKAVTEQIESM--KFNT--AIAQLMVFINAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI---------------------SIAIEKLVQER 416
             D L +  A   +  I     HL + +                     S  IE  ++  
Sbjct: 718 -EDKLYVDYAKGFVQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLIEDEIEIV 776

Query: 417 LILL---KMKKFSSADYIRKQLESKGFILEDYK 446
           + +    + K   + D  R++L+     L D K
Sbjct: 777 VQIKGKVRAKLMVAKDLSREELQE--IALADEK 807


>gi|308049567|ref|YP_003913133.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307631757|gb|ADN76059.1| methionyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 685

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 30/174 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A+  + T N++ H G++ + G KMSKS G FI     L+
Sbjct: 292 HFIGKDIIYFHSLFWPAMLHGANLRKPT-NVFAH-GYVTVNGAKMSKSRGTFIKARTYLD 349

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 350 -------HLNPEYLRYY-----YAAKLN---DRIDDLDLNLEDFAQRVNADMVGKLVNIA 394

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
           S + G I       L + ++    +      A      ++      A   I+ +
Sbjct: 395 SRTAGFIAKRFDGKLADGIDQPELLAEFQNAAETIANFYEGREYGKAIREIMAL 448


>gi|149195308|ref|ZP_01872396.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134572|gb|EDM23060.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 634

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 62/359 (17%), Positives = 98/359 (27%), Gaps = 91/359 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D + R  R    +   T+    TD         + E  +     
Sbjct: 17  VNDVPHIGHAYTTIIADTIARYSRLKGID---TFFLTGTD-----EHGQKIEEAARKKGK 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEA-- 148
           +      + + +F +              R T+        +Q     +   G  Y+   
Sbjct: 69  SPKEYADEISAKFKELWDEFEISY-DKFIRTTD--EAHKRGVQKAFLEMYKKGDIYKDYY 125

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL---------W-KRST 198
                    S            DE       P +  K+    F L         W K   
Sbjct: 126 EGHYCVSCESFIAPSQLVN---DELCPDCGKPTRIIKEESYFFRLSKYQDKILDWLKNKK 182

Query: 199 PMEP---------------------GWESPWGRGRP------------------------ 213
           P+ P                          WG   P                        
Sbjct: 183 PILPEAKANEVIRFVEEGLKDLSITRTSFEWGVKLPDEINDKKHVVYVWLDALFNYLTAL 242

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA--QSCCADRIEKTANIWIHNGFL 271
           G+  E  ++   Y      I G  + L F H     A   S   +  +K A      G+ 
Sbjct: 243 GYGSEDESLVKKYWPAKLHIVGKDI-LKF-HAVYWPAFLMSIGYELPKKIAAH----GWW 296

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
             +G KMSKS GN I   E+ +       ++     R  +L    +    DF+ + L +
Sbjct: 297 TRDGEKMSKSKGNVIDPKEVAD-------AYGIENFRYFLLREVPFGADGDFSEKALID 348


>gi|256372097|ref|YP_003109921.1| leucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008681|gb|ACU54248.1| leucyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 815

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 66/181 (36%), Gaps = 25/181 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC--------ADRIEKTANIWIHNGFLNLEGRKMSKS 281
             D + GG++    H       +          A   E    ++   G +   G KMSKS
Sbjct: 527 PVDQYIGGIEHAILHLLYARFFTKALSDLGLIPATLREPFRQLFT-QGMIRFHGSKMSKS 585

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDF---TVQRLTEAEILLSKW 337
            GN +T  +  +T         A  +RL    +    + +D+   T + +      L + 
Sbjct: 586 KGNLVTPQQYFDTVG-------ADALRLYHFFVGPPADDVDWTDQTDEIIEGCARYLQRV 638

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHILGI 394
            + +   G+ D    + + NDL    AI+ L +   ++      +  +      A++LG 
Sbjct: 639 WRLAERIGVTDTPTSAPVANDL--AIAIERLTQRVTDAIERWSYNAAVAALMELANLLGD 696

Query: 395 E 395
           E
Sbjct: 697 E 697


>gi|51246404|ref|YP_066288.1| isoleucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|81826763|sp|Q6AK45|SYI_DESPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50877441|emb|CAG37281.1| probable isoleucyl-tRNA synthetase [Desulfotalea psychrophila
           LSv54]
          Length = 939

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 50/131 (38%), Gaps = 18/131 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   ++ +G+KMSKS GN +   E+++        + A ++RL +    Y
Sbjct: 582 GYAPFKGVLTHGYVVDGQGKKMSKSVGNVVAPQEVID-------EYGAEILRLWVSSEDY 634

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS---AIQALHKLAR 373
           R+ +  + + L +      K   T           L  L ND +      A+  + +L R
Sbjct: 635 RDDVKVSKEILKQVSDSYRKIRNTIRY-------FLGNL-NDFDPSKDRIAVSEMSELDR 686

Query: 374 ESTKNHDLLPI 384
            +    + L  
Sbjct: 687 WALARFEELRA 697


>gi|33865789|ref|NP_897348.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|48428528|sp|Q7U6T1|SYL_SYNPX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33632959|emb|CAE07770.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 857

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 38/120 (31%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R  ++ DV+ R+ R       V +              A      I  N      
Sbjct: 49  HMGHVRNYVITDVIARVQRMRG--HSVLHPMGWDAFGLPAENAA------IERNVDPGDW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T +N  Q      RL       + +AT H        Q     +   G AY  N  + +D
Sbjct: 101 TDRNIDQMRSQLDRLGLSIDWDREQATCH-SDYYRWTQWLFLELFDGGLAYRKNATVNWD 159


>gi|19074278|ref|NP_585784.1| LEUCYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
 gi|74621204|sp|Q8SRS8|SYLC_ENCCU RecName: Full=Probable leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|19068920|emb|CAD25388.1| LEUCYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
          Length = 874

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 30/69 (43%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+  GG DL+  H    +         +        NG L L   KMSKS+GN++T++
Sbjct: 497 PIDLRVGGKDLLKNHLIFFLFNHVALFEEKHWPKRMFTNGHLMLNSEKMSKSSGNYMTVD 556

Query: 290 ELLETKKFG 298
           E L+     
Sbjct: 557 ESLDKFGVS 565


>gi|259155146|ref|NP_001158815.1| Leucyl-tRNA synthetase, cytoplasmic [Salmo salar]
 gi|223647536|gb|ACN10526.1| Leucyl-tRNA synthetase, cytoplasmic [Salmo salar]
          Length = 1176

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 64/209 (30%), Gaps = 54/209 (25%)

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
            +  +     G  + +          +  +   +   DFI +K S    P  +       
Sbjct: 603 YYTVAHFLQGGVLNGQGPSPLG----IKPEQMTREVWDFIFFKSSP--FPKTD------I 650

Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHN 268
           P  H++       Y     D    G DL+  H      N +A     +   K       N
Sbjct: 651 PKEHLQRLRREFEY-WYPVDARVSGKDLVPNHLSYYLYNHVAMW--PNDSGKWPQAVRAN 707

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           G L L   KMSKS GNF+T++E +         + A  +R+                 L 
Sbjct: 708 GHLLLNSEKMSKSTGNFLTLSEAIA-------KFSADGMRM----------------ALA 744

Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           +A   +             D   + A+ +
Sbjct: 745 DAGDTVE------------DANFVEAMAD 761


>gi|197335481|ref|YP_002155222.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|254782453|sp|B5FA60|SYI_VIBFM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|197316971|gb|ACH66418.1| isoleucyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 952

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 592 SVAMKGKAPYRQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 644

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 645 ASTDYTNEVAVSDEILKRSADAYRRIRNTAR 675


>gi|190149313|ref|YP_001967838.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|307262626|ref|ZP_07544256.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
 gi|254782357|sp|B3GZN4|SYI_ACTP7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189914444|gb|ACE60696.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           7 str. AP76]
 gi|306872049|gb|EFN03763.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           13 str. N273]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|154499613|ref|ZP_02037651.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
 gi|150271691|gb|EDM98935.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
           29799]
          Length = 656

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 61/181 (33%), Gaps = 41/181 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     +           +G+L L+G KMSKS GN +     
Sbjct: 258 DVHFVGKEIVRFHSIIWPAILMALNL--PLPKKVFGHGWLLLDGGKMSKSKGNVV----- 310

Query: 292 LETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRL---------TEAEILLSK----- 336
                     +    +R  +L T  +    +F+ + L          +   LLS+     
Sbjct: 311 --DPYLLSERYGVDALRFFLLRTFPFGSDGNFSNEALIGTINTDLANDLGNLLSRTVSMV 368

Query: 337 --------WPQTSTSKGIIDP--AVLSALYND-------LNTVSAIQALHKLARESTKNH 379
                    P   T+ G+ D   A+ S L +             A+  + KL   + K  
Sbjct: 369 GKYFEGGTLPAEQTADGLDDELIALASGLRDKYEAAMERFAFQDALSEVFKLISRANKYI 428

Query: 380 D 380
           D
Sbjct: 429 D 429



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 12/128 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+A   +  DV+ R  R    +  V ++    +   KI ++A+    +       
Sbjct: 18  DKLHIGHAYCTVATDVMARYKRLTGYD--VMFLTGTDEHGQKIEDKAKDAGVTPKQYVDN 75

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
            +   +       D  +L  ++     R T+        +Q I      YE   +I   T
Sbjct: 76  IVEGERGVL----DLWKLMNISNDRFIRTTD--DYHEAAVQKIFKQ--LYE-QGDIYKGT 126

Query: 157 SSIPNYGS 164
                Y  
Sbjct: 127 YK-GKYCK 133


>gi|108757222|ref|YP_628632.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108461102|gb|ABF86287.1| isoleucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 966

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN +  ++++       + + A V+RL +  + YR  +  + Q 
Sbjct: 630 HGFVVDGQGEKMSKSRGNVVAPDKVI-------QQYGAEVLRLWVAASDYRNDVRLSDQI 682

Query: 327 LTEAEILLSKWPQTST 342
           L        K   T  
Sbjct: 683 LKGLSEGYRKIRNTVR 698


>gi|59711074|ref|YP_203850.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|75354555|sp|Q5E7N4|SYI_VIBF1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59479175|gb|AAW84962.1| isoleucyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 952

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 592 SVAMKGKAPYRQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 644

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 645 ASTDYTNEVAVSDEILKRSADAYRRIRNTAR 675


>gi|253998233|ref|YP_003050296.1| isoleucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253984912|gb|ACT49769.1| isoleucyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 935

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  G KMSKS GN +   ++++T       + A ++RL + 
Sbjct: 588 CAIDGRAPYNALLTHGFVVDGAGHKMSKSKGNVVAPQKVMDT-------YGADILRLWVA 640

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 641 STDYSGELTISDEILKRVAEGYRRIRNT 668


>gi|297198127|ref|ZP_06915524.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197714179|gb|EDY58213.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 272

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/167 (14%), Positives = 54/167 (32%), Gaps = 17/167 (10%)

Query: 248 EIAQSCCADRIEKTANI------WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           E+     A  I    +       W  +  +++ G   +  +G  + +  +          
Sbjct: 103 ELHAGAAALGIRPFEDRRDVGPGWGESQVVHVVGEGGAAPDGIRVAVAPV--ETPGLPEG 160

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVL 352
                +RLA+L      P       L EA   L +W +   +            +   + 
Sbjct: 161 ADPAEVRLALLTPPRTTPAQLDEAALAEARGTLQRWRRAVAAWARQPSRPVPEKVRGRLR 220

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
           SA  +DL+    ++ L  +             +  +  +LG+E+ ++
Sbjct: 221 SAWEDDLDVPEVLRVLRWVEESDLPEGARFETYAYADRLLGLELTRD 267


>gi|195160211|ref|XP_002020969.1| GL25089 [Drosophila persimilis]
 gi|194118082|gb|EDW40125.1| GL25089 [Drosophila persimilis]
          Length = 949

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 37/92 (40%), Gaps = 12/92 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  +
Sbjct: 608 SIAARDCAPYKALFVHGFTVDEKGHKMSKSLGNVISPKQI-------TKKYGTDALRWWV 660

Query: 312 LMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
                 H    I  + + L +A   LSK   T
Sbjct: 661 ASHGTQH--TSITVSDKLLQKATENLSKVRGT 690


>gi|319425458|gb|ADV53532.1| isoleucyl-tRNA synthetase [Shewanella putrefaciens 200]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 19/169 (11%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
            I    +            A ++RL +  T Y   +  + + L  +     +   T+   
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTARFL 665

Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLA--RESTKNHDLLPIFNA 387
             +    DPA       DL  V  + AL +    R +    +++  ++ 
Sbjct: 666 LANLNGFDPAK------DLVAVEDMVALDRWVVRRAAALQQEIIEAYDQ 708


>gi|313200306|ref|YP_004038964.1| isoleucyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312439622|gb|ADQ83728.1| isoleucyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 935

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  G KMSKS GN +   ++++T       + A ++RL + 
Sbjct: 588 CAIDGRAPYNALLTHGFVVDGAGHKMSKSKGNVVAPQKVMDT-------YGADILRLWVA 640

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 641 STDYSGELTISDEILKRVAEGYRRIRNT 668


>gi|305432137|ref|ZP_07401303.1| methionine--tRNA ligase [Campylobacter coli JV20]
 gi|304444802|gb|EFM37449.1| methionine--tRNA ligase [Campylobacter coli JV20]
          Length = 628

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E  +     +T  D+      + E  +   N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHETRL-----LTGTDEH---GQKIEQAAKIRNS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  H+  +  +   +   G  Y  E   
Sbjct: 63  TPKEYADKISSEFKKLWDEFEITY-DIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 122 HYCISCESF 130


>gi|229076249|ref|ZP_04209216.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-18]
 gi|228706898|gb|EEL59104.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-18]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|153838772|ref|ZP_01991439.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149747804|gb|EDM58694.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 942

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S     +     +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKGVAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|71394074|gb|AAZ32113.1| isoleucyl-tRNA synthetase [uncultured euryarchaeote Alv-FOS5]
          Length = 945

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           +   +I  H   L+  G KMSKS GN +T NE +E        +    +R   L   Y +
Sbjct: 561 KPFDHIMYHGFVLDTHGVKMSKSKGNAVTTNEAIE-------KYSRDELRYYYLTVDYSQ 613

Query: 319 PIDFTVQRLTE 329
            + F    L E
Sbjct: 614 DMTFDWNTLRE 624


>gi|307704110|ref|ZP_07641038.1| leucyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307622332|gb|EFO01341.1| leucyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 833

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 70/215 (32%), Gaps = 60/215 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGSLDKVYNETVKAVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKL 412
             D L +  A   +  I     HL + +                            IE +
Sbjct: 718 -EDKLYVDYAKGFVQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIV 776

Query: 413 VQERLILLKMKKFSSA-DYIRKQLESKGFILEDYK 446
           VQ +  +     F  A D  R++L+     L D K
Sbjct: 777 VQIKGKVRAK--FMVAKDLSREELQE--IALADEK 807


>gi|307730979|ref|YP_003908203.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585514|gb|ADN58912.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 863

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|189424047|ref|YP_001951224.1| isoleucyl-tRNA synthetase [Geobacter lovleyi SZ]
 gi|189420306|gb|ACD94704.1| isoleucyl-tRNA synthetase [Geobacter lovleyi SZ]
          Length = 924

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 11/98 (11%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +    ++  H   L+ +GRKMSKS GN +   +++       + + A V+RL      Y
Sbjct: 581 GVAPYKSVLTHGFVLDGQGRKMSKSMGNVVAPEDVI-------KKFGADVLRLWCSAQDY 633

Query: 317 REPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
           R+    + + L        +   T      +    DPA
Sbjct: 634 RDDNRISEEILNRVAEAYRRIRNTCRFMLGNLNDFDPA 671


>gi|187736581|ref|YP_001878693.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
 gi|187426633|gb|ACD05912.1| methionyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
          Length = 550

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 60/345 (17%), Positives = 105/345 (30%), Gaps = 88/345 (25%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+A   ++ DVL R  R    E     V  +T +D       + +  
Sbjct: 25  YTNGP-----PHIGHAYEKVLADVLARWHRMKGEE-----VYFLTGVDQH---GQKVQQT 71

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAP----THQPRATNHIPQMIYLIQNIILHGH 144
           +  +        +  T QF+    RL         T  PR    + +++    ++   G 
Sbjct: 72  AEKLGITPQEHVNNITGQFLALWDRLGISNDGWASTTDPRHKACVQKILT---DLKDKGQ 128

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQ-----KMGTRVPEKYHKKNPA---------- 189
            Y+ + +  +           + ++ D +     + G  V  +                 
Sbjct: 129 LYKKSYKGFYSVRQEQ---FLTDKERDAEGNFGPEWGEVVELEEENWYFRLTDHVEWMKQ 185

Query: 190 ------DFIL---WKRSTPMEPGWESPWGRGRP----GWHIECS------------AMSS 224
                 DF+L    K        ++S     RP     W IE              A+ +
Sbjct: 186 FVEKSSDFVLPSFRKAEVLNAIDFDSDLCISRPKSRLSWGIEFPFDPEFVTYVWFDALIN 245

Query: 225 -----HYLGKV------F------DIHGGGLDLIFP-HHENEIAQSCCADRIEKTANIWI 266
                 YL +       F      D    G D++ P H     A        ++     +
Sbjct: 246 YISFAGYLAEPDSGLPEFSKLWPADCEVIGKDILVPAHGVYWPAMLHAMGFSDEEMPTLL 305

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            +G+ N+ G KMSKS GN +               +    +R  +
Sbjct: 306 VHGWWNINGEKMSKSIGNVV-------DPNLLAEQFGPEPVRYYL 343


>gi|86605939|ref|YP_474702.1| leucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|123751807|sp|Q2JV13|SYL_SYNJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|86554481|gb|ABC99439.1| leucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 873

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 42/159 (26%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A      I  
Sbjct: 43  PYPSGSLHMGHVRNYTITDVIARHKRMQGY--AVLHPMGWDAFGLPAENAA------IDR 94

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T +N  Q      RL  L+   +   T   P      Q         G AY+ 
Sbjct: 95  GIPPAKWTYQNIAQMRDQLQRLG-LSYDWEREITTCAPDYYKWTQWLFLQFFKAGLAYQK 153

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D +    R      K+
Sbjct: 154 EAPVNWDPVDQT----VLANEQVDAEGRSWRSGALVEKR 188


>gi|28897308|ref|NP_796913.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260363892|ref|ZP_05776640.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|260876271|ref|ZP_05888626.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|81728462|sp|Q87S90|SYI_VIBPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28805517|dbj|BAC58797.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|308092895|gb|EFO42590.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308112965|gb|EFO50505.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 942

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S     +     +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKGVAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|260903301|ref|ZP_05911696.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|308107941|gb|EFO45481.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 942

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S     +     +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKGVAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|53803700|ref|YP_114671.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|81681450|sp|Q605M7|SYI_METCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53757461|gb|AAU91752.1| isoleucyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 939

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ EG+KMSKS GN +   ++++T         A V+RL +
Sbjct: 579 SVAMSGQAPYKAVLTHGFTVDAEGKKMSKSRGNVVAPQKVMQTLG-------ADVLRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
             T YR  +  + + L     +  +   T+     +    DPA
Sbjct: 632 AATDYRGEMTVSDEILKRISDVYRRIRNTARYLLANLDGFDPA 674


>gi|330834208|ref|YP_004408936.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566347|gb|AEB94452.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 952

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 8/120 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NGF+  EGRKMSKS  N + + 
Sbjct: 586 PLDMRHSGPDLIPNHLSFFIFNHAGIFPESLWPKGVAVNGFILYEGRKMSKSLRNIVPLR 645

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + ++        + A V+RL++          +FT          L ++ + +  K   D
Sbjct: 646 KAIKM-------YGADVVRLSLSSLVDMNSDANFTDSGAKSISDSLKRFYELAQMKNGSD 698



 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 20/58 (34%), Gaps = 5/58 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-----DIDDKIIERARQ 85
           P      H+G+ R  +  DV  R +R            + T      + D I +  ++
Sbjct: 48  PYPNSPFHLGHGRTYVTGDVYARYMRMKGYNVLFPMGFHFTGTPIITMADDISKGDKE 105


>gi|317179600|dbj|BAJ57388.1| isoleucyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 920

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +     + E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFAQTEQHYKK 662

Query: 337 WPQT----STSKGIIDPAVLSALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +  T      +   +D   L   +N    D   + A++ +      + + HD +   N  
Sbjct: 663 FRNTLKFLLANFSDMDLKNLERSHNFSPLDHFILEALETISAGVNSAFEEHDFVKGLNIL 722

Query: 389 AHI 391
              
Sbjct: 723 MAF 725


>gi|303244593|ref|ZP_07330926.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302485019|gb|EFL47950.1| isoleucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 1056

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 10/90 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN +  ++++E        + A ++R 
Sbjct: 593 ALSEIVFNDIPYKKCMMHGFALDENGNKMSKSLGNVVNPDDVVE-------EYGADLLRY 645

Query: 310 AMLMTH--YREPIDFTVQRLTEAEILLSKW 337
            +L  +  + E I F+ + L E + L +  
Sbjct: 646 YLLSANKAW-EDIRFSYKELGEIKSLFNTL 674


>gi|317178128|dbj|BAJ55917.1| isoleucyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 920

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +     + E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFAQTEQHYKK 662

Query: 337 WPQT----STSKGIIDPAVLSALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +  T      +   +D   L   +N    D   + A++ +      + + HD +   N  
Sbjct: 663 FRNTLKFLLANFSDMDLKNLERSHNFSPLDHFILEALETISAGVNSAFEEHDFVKGLNIL 722

Query: 389 AHI 391
              
Sbjct: 723 MAF 725


>gi|303250523|ref|ZP_07336720.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|307251565|ref|ZP_07533472.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|302650511|gb|EFL80670.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
 gi|306861029|gb|EFM93035.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           6 str. Femo]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|229163736|ref|ZP_04291681.1| Leucyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619703|gb|EEK76584.1| Leucyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|223998496|ref|XP_002288921.1| probable isoleucine-trna synthetase [Thalassiosira pseudonana
           CCMP1335]
 gi|220976029|gb|EED94357.1| probable isoleucine-trna synthetase [Thalassiosira pseudonana
           CCMP1335]
          Length = 1103

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 14/111 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+     DLI  H    +         E       +  NG + ++  KMSKS GNF+ 
Sbjct: 710 PMDLRVSAKDLIPNHLTMALYNHAAMWDDEPELWPRGYYTNGHIMVDAEKMSKSKGNFLM 769

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLS 335
           + E +E       ++ A   R A       + +D   F+      A + LS
Sbjct: 770 MLETIE-------NYSADATRFACADAG--DTLDDANFSRDTANTAIVSLS 811


>gi|254473549|ref|ZP_05086945.1| isoleucyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211957261|gb|EEA92465.1| isoleucyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 977

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 16/159 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   +  +GRKMSKS GN I   +++       + + A ++RL +
Sbjct: 624 SCGTRGHAPYDAVLTHGFTMAEDGRKMSKSLGNTIAPQDVI-------KQYGADILRLWV 676

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYN----DLNTVS 363
               Y E      + +        K   T      S G  +   + AL +    +L  + 
Sbjct: 677 GSVDYAEDQRIGPEIIKTNVDAYRKLRNTLRFMLGSLGHYEGEEV-ALADMEELELLMLH 735

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
            +  L  L R++    D   +F+   + + +E+   + +
Sbjct: 736 RLAELDVLVRDAYMAFDSKRVFSTLFNFMTVELSAFYFD 774


>gi|62751875|ref|NP_001015831.1| leucyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
 gi|59807603|gb|AAH90117.1| MGC97760 protein [Xenopus (Silurana) tropicalis]
          Length = 1177

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A           A     NG L L   KMSKS 
Sbjct: 665 FWYPVDLRVSGKDLVPNHLSYFLYNHVAMWPEDSGKWPVAVR--ANGHLLLNSEKMSKST 722

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T++E +E        + A  +RL                 L +A   +        
Sbjct: 723 GNFLTLSEAVE-------KFSADGMRL----------------ALADAGDTVE------- 752

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 753 -----DANFVEAMAD-----AGILRLYTWVEWVKEMLANFDSL 785


>gi|332674188|gb|AEE71005.1| isoleucine--tRNA ligase [Helicobacter pylori 83]
          Length = 920

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 70/183 (38%), Gaps = 19/183 (10%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT----STSKGIIDPAVLSALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +  T      +   +D   L   +N    D   + A++ +      + + HD +   N  
Sbjct: 663 FRNTLKFLLANFSDMDLKDLERSHNFSPLDHFILEALETISAGVNSAFEEHDFVKGLNIL 722

Query: 389 AHI 391
              
Sbjct: 723 MAF 725


>gi|324328635|gb|ADY23895.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|307638077|gb|ADN80527.1| Isoleucyl-tRNA synthetase [Helicobacter pylori 908]
 gi|325996680|gb|ADZ52085.1| Isoleucyl-tRNA synthetase [Helicobacter pylori 2018]
 gi|325998271|gb|ADZ50479.1| Isoleucyl-tRNA synthetase [Helicobacter pylori 2017]
          Length = 920

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 15/168 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D      ++ +   C  +       +  H   ++ +G KMSKS GN ++++ L
Sbjct: 565 DVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNL 624

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGII 347
           L+          + V+RL +    Y+  +  +     + E    K+  T      +   +
Sbjct: 625 LKKHG-------SDVVRLWVAFNDYQNDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDM 677

Query: 348 DPAVLSALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
           D   L   ++    D   + A++ +      + + HDL+   N     
Sbjct: 678 DLKNLERPHDFSPLDHFILEALETISAGVNSAFEEHDLVKGLNILMAF 725


>gi|218438831|ref|YP_002377160.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|226695251|sp|B7KCI7|SYL_CYAP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218171559|gb|ACK70292.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 854

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 49/175 (28%), Gaps = 20/175 (11%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y      Y     H+G+ R  ++ DV+ RL R       V +        
Sbjct: 26  TPEDNTKPKYYALSMFPYPSGNLHMGHVRNYVITDVIARLKRMQG--HRVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   +L  L+       T   P      
Sbjct: 84  LPAENAA------IERGIHPAKWTYQNIAQMRQQLQQLG-LSIDWSREVTTCSPDYYQWT 136

Query: 137 Q----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    +              +  ++D +    R   K  +K
Sbjct: 137 QWLFLQFFQAGLAYQKEAAVNWDPVDQT----VLANEQVDSEGKSWRSGAKVERK 187


>gi|47565165|ref|ZP_00236208.1| leucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47557951|gb|EAL16276.1| leucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|113477079|ref|YP_723140.1| isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110168127|gb|ABG52667.1| Isoleucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 1152

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L    DI+  G D      ++ +  S   + +     +  H   L+  GRKMSKS GN +
Sbjct: 562 LRYPVDIYLEGSDQHRGWFQSSLLTSIATNGVAPYQTVLTHGFVLDENGRKMSKSLGNVV 621

Query: 287 TINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               ++E  K   +   + A ++RL +    Y   +      L +   +  K   T+ 
Sbjct: 622 DPVIVIEGGKNQKQEPAYGADILRLWVSSVDYSSDVPLGKNILKQIADIYRKIRNTAR 679


>gi|329765740|ref|ZP_08257309.1| leucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137806|gb|EGG42073.1| leucyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 959

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 57/162 (35%), Gaps = 21/162 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +                + NG + + G KMSKS GN I + + +   
Sbjct: 585 SGRDLVPNHLTFFVLNHVAIFPESNWPKEIVVNGSVLMNGSKMSKSMGNIIPLRKAI--- 641

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
               + + A  IRLA++          + + L +A+  +            +        
Sbjct: 642 ----QDYGADPIRLAII---------ISAELLQDADFNMESVSGIQNKLESLFNECSRLK 688

Query: 356 YNDLNTVSA-----IQALHKLARESTKNHDLLPIFNASAHIL 392
              ++T+ A     +    +L  + T + + + +  A   IL
Sbjct: 689 AEKIDTLEAEDKWILSKTQRLVSQVTGSIEKMRLREALHDIL 730


>gi|229019098|ref|ZP_04175933.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229025342|ref|ZP_04181760.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735927|gb|EEL86504.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228742198|gb|EEL92363.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 921

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 19/141 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS---AIQAL 368
               Y+  +  +   L +   +  K   T           L    +D N      A+  L
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFNPSENTVAVAEL 672

Query: 369 HKLAR-ESTKNHDLLPIFNAS 388
            ++ R    K +DL+     +
Sbjct: 673 REVDRYMLVKLNDLITKVKDA 693


>gi|195446223|ref|XP_002070684.1| GK10894 [Drosophila willistoni]
 gi|194166769|gb|EDW81670.1| GK10894 [Drosophila willistoni]
          Length = 581

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 36/125 (28%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  +    V       +   KI + A      +    
Sbjct: 30  VNAAPHIGHLYSAVIADAHCRYQRLRHPNADVLLCTGTDEHGTKIQQAAAGHKVPV--GQ 87

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+ +    F                R T   H   + +  + +  +GH Y A    
Sbjct: 88  YCDEISQRYRDVF----QAAHIQNDDF-IRTTEERHKQAVSHFWRKLHDNGHIYSAAYSG 142

Query: 153 IFDTS 157
            +  S
Sbjct: 143 WYCVS 147



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 13/72 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    +++H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 297 AAGLEPPRQLYVHSHW-TVDGQKMSKSKHNVV-------DPVKAAQEYTMEGLRYFLLRE 348

Query: 314 --THYREPIDFT 323
              H     +++
Sbjct: 349 GVAH--SDGNYS 358


>gi|307249243|ref|ZP_07531240.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
 gi|306858767|gb|EFM90826.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           4 str. M62]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|290579895|ref|YP_003484287.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996794|dbj|BAH87395.1| putative valyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 882

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           +  +G   PE            WK+   +   W S   W     GW    S     Y   
Sbjct: 424 DMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDTDSEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS          N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRRPFQNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           ++++        + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 533 DVVD-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|228923497|ref|ZP_04086779.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228836135|gb|EEM81494.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QENGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|163941635|ref|YP_001646519.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229013080|ref|ZP_04170245.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|254782368|sp|A9VTD5|SYI_BACWK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|163863832|gb|ABY44891.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|228748334|gb|EEL98194.1| Isoleucyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 921

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 50/141 (35%), Gaps = 19/141 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS---AIQAL 368
               Y+  +  +   L +   +  K   T           L    +D N      A+  L
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFNPSENTVAVAEL 672

Query: 369 HKLAR-ESTKNHDLLPIFNAS 388
            ++ R    K +DL+     +
Sbjct: 673 REVDRYMLVKLNDLITKVKDA 693


>gi|126207532|ref|YP_001052757.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|303251867|ref|ZP_07338038.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|307260496|ref|ZP_07542190.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
 gi|166228632|sp|A3MYB6|SYI_ACTP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126096324|gb|ABN73152.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           5b str. L20]
 gi|302649297|gb|EFL79482.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. 4226]
 gi|306869808|gb|EFN01591.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           12 str. 1096]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|152998225|ref|YP_001343060.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
 gi|189082326|sp|A6W346|SYI_MARMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150839149|gb|ABR73125.1| isoleucyl-tRNA synthetase [Marinomonas sp. MWYL1]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +  H   ++ +GRKMSKS GN ++  ++++T         A +IRL +
Sbjct: 579 SIAIRGVPPYKQVLTHGFTVDGDGRKMSKSLGNVLSPQKVMDTLG-------ADIIRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L        +   T+ 
Sbjct: 632 AATDYTTEMTVSDEILKRVADSYRRIRNTAR 662


>gi|145588420|ref|YP_001155017.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|189083136|sp|A4SVD9|SYL_POLSQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145046826|gb|ABP33453.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 890

 Score = 46.4 bits (109), Expect = 0.009,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 40/138 (28%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  KKPKYYACSMLPYPSGKLHMGHVRNYTINDVMARQLRMQGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ +I      +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAAIQNKVPPAKWTYDNIAYMKKQMAAMG-LAIDWSREVATCSPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGVAYRKTQVVNWD 165


>gi|119774061|ref|YP_926801.1| isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|166229766|sp|A1S425|SYI_SHEAM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119766561|gb|ABL99131.1| Isoleucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++ +GRKMSKS GN
Sbjct: 553 EFQGHGVDLYLEGSDQHRGWFMSSLMLSTAMHAKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I   E+            A ++RL +  T Y   +  + + L  A     +   T  
Sbjct: 613 VIAPQEVTNKLG-------ADILRLWVAATDYSGEMSVSDEILNRAADSYRRIRNTGR 663


>gi|307244845|ref|ZP_07526944.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|307253799|ref|ZP_07535653.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|307258255|ref|ZP_07539998.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
 gi|306854290|gb|EFM86496.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           1 str. 4074]
 gi|306863283|gb|EFM95223.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           9 str. CVJ13261]
 gi|306867715|gb|EFM99560.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           11 str. 56153]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|209694172|ref|YP_002262100.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|254782358|sp|B6EMY6|SYI_ALISL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|208008123|emb|CAQ78265.1| isoleucyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 952

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 592 SVAMKGKAPYRQVLTHGFVVDGNGRKMSKSVGNVVAPKDVTNKLG-------ADILRLWV 644

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 645 ASTDYTNEVAVSDEILKRSADAYRRIRNTAR 675


>gi|306828817|ref|ZP_07462009.1| leucine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304428995|gb|EFM32083.1| leucine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 833

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 68/213 (31%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  +E++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDEVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHD-------------------LLPIFNASAHILG-----IEVCKEHLNKNISIAIEKLV 413
                                 L      +  + G     +       +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAVTGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--VALADDK 807


>gi|325982869|ref|YP_004295271.1| isoleucyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325532388|gb|ADZ27109.1| isoleucyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 932

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +  +L    D++  G D      ++ +   C  D       +  H   ++  G KMSKS 
Sbjct: 554 ADAHLTFPVDLYLEGSDQHRGWFQSSLLTGCAIDDRAPYKALLTHGFVVDGNGHKMSKSK 613

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           GN I   ++++T         A ++RL +  T Y   +  + + L        +   T
Sbjct: 614 GNVIAPQKVMDTSG-------ADILRLWVASTDYSGELSISEEILKRVIESYRRIRNT 664



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 47/134 (35%), Gaps = 10/134 (7%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERARQE 86
           GP  Y     HIG+A   I+ D++ +       +           +  I+ +I ++  + 
Sbjct: 56  GP-PYANGDIHIGHAVNKILKDIIIKSKTLSGFDAPYIPGWDCHGLP-IEHQIEKKHGKY 113

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI---PQMIYLIQNIILHG 143
            P+  + +       +  ++   D  RL  L     P  T +      +I  +  I   G
Sbjct: 114 LPADKVRELCRAFAQEQVERQKSDFIRLGVLGDWEHPYLTMNFKTEAGIIRALGKIYQKG 173

Query: 144 HAYEANNEIIFDTS 157
           + Y+    + +   
Sbjct: 174 YLYQGQKPVNWCID 187


>gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 606

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 45/145 (31%), Gaps = 16/145 (11%)

Query: 14  KITEFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           ++  F+A D    ++YV    P      H+G+ R   + DV+ R LR+      V +   
Sbjct: 19  ELELFKAHDEGK-KVYVLEMFPYPSGRIHMGHVRNYTIGDVVARFLRFKGY--RVLHPMG 75

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
                      A      I      +  T KN         RL       +  AT   P+
Sbjct: 76  WDAFGLPAENAA------IKQGIHPADWTYKNIAYMKNQLKRLGFSYDWDREIAT-CDPE 128

Query: 132 MIYLIQ----NIILHGHAYEANNEI 152
                Q         G AY    E+
Sbjct: 129 YYRWNQWIFLKFYERGLAYRKLAEV 153


>gi|323527344|ref|YP_004229497.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384346|gb|ADX56437.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 863

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|255020636|ref|ZP_05292698.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969872|gb|EET27372.1| Leucyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 823

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 10/93 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G +  +G KMSKS GN +   ELL+        + A   RL +L      
Sbjct: 568 EPFRRL-LTQGMVLKDGAKMSKSKGNTVDPQELLDR-------YGADTARLFILFAAPPE 619

Query: 318 EPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP 349
           + ++++   +  A   L + W       G   P
Sbjct: 620 QSLEWSDSAVEGAYRFLQRVWRLVQDYDGEPTP 652


>gi|228987994|ref|ZP_04148099.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771741|gb|EEM20202.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|229099219|ref|ZP_04230151.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229105374|ref|ZP_04236019.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|229118233|ref|ZP_04247590.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665205|gb|EEL20690.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228678031|gb|EEL32263.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228684200|gb|EEL38146.1| Leucyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|206969627|ref|ZP_03230581.1| leucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|229072245|ref|ZP_04205451.1| Leucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|229081997|ref|ZP_04214486.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|229181058|ref|ZP_04308391.1| Leucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|206735315|gb|EDZ52483.1| leucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|228602386|gb|EEK59874.1| Leucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228701296|gb|EEL53793.1| Leucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228710853|gb|EEL62822.1| Leucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|75763436|ref|ZP_00743161.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228903260|ref|ZP_04067392.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967845|ref|ZP_04128857.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|74489075|gb|EAO52566.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|228791811|gb|EEM39401.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856361|gb|EEN00889.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|47568720|ref|ZP_00239416.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47554614|gb|EAL12969.1| lysyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 517

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 75/453 (16%), Positives = 134/453 (29%), Gaps = 84/453 (18%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY------ 68
           E     P+   ++VC  G +     HIGN R ++    + R L+    +    +      
Sbjct: 10  ELIRKHPNK-EIFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSLDDYD 68

Query: 69  -VRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    +     P   I D     +       ++F +               
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEESLQVFGIEVEFIYQH 127

Query: 124 ---RATNHIPQM---------IYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRR-- 168
              R+  +   +         IY I      G   E         T      G  +    
Sbjct: 128 SEYRSGRYNKNILGALCKRKEIYDILMSFKTGECSEEEREGFYPVTLYCEKCGKDATTIT 187

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
             DE     R   +   +N    +    +  M+  W+  W      W IE          
Sbjct: 188 HFDEVLKTVRYECECRNQNELSIL---NTNNMKLNWKVDWPMR---WMIEDVVFEP---- 237

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFI 286
                  GG D         +++        + A  ++   F+ ++G   KMS S+GN I
Sbjct: 238 -------GGRDHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSI 290

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTS 343
           T +ELL       + +   VI        YR    F     + +        +   +  +
Sbjct: 291 TPSELL-------KVYLPEVILFMF--AKYRPDAAFHIGLDEDVIRNYTEYERLKDSYEN 341

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           K + +  +  A+              KL+R  +   +  P FN  A  L +      + +
Sbjct: 342 KTLKNEDLFDAI--------------KLSRVDSGFKEY-PKFNQVAGTLPLLNFDSFILQ 386

Query: 404 NISIAIE---KLVQERLILLKMKKFSSADYIRK 433
            I   I+    L + R I  + + +     IR 
Sbjct: 387 EILEKIDRSYALDEMRAISNRAEHW-----IRN 414


>gi|327475196|gb|AEA77193.1| leucyl-tRNA synthetase [Bacillus aquimaris]
          Length = 650

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 40/105 (38%), Gaps = 9/105 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E+         A  +RL  M M   
Sbjct: 403 KEPFQKLFNQGMILGENNEKMSKSKGNVVNPDEVVESHG-------ADTLRLYEMFMGPL 455

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLN 360
              I ++   L  A   L + W       G +   V  A  +DL+
Sbjct: 456 EASIAWSTNGLDGARRFLDRVWRLLVEEDGTLSSKVTDAPNSDLD 500


>gi|331267104|ref|YP_004326734.1| leucyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326683776|emb|CBZ01394.1| leucyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 833

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|323699296|ref|ZP_08111208.1| arginyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459228|gb|EGB15093.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 547

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 62/393 (15%), Positives = 118/393 (30%), Gaps = 71/393 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D L R+L     +    Y  N      +I+  +         
Sbjct: 126 PT--GPLHIGHGRGAALGDSLTRILEKAGYDVEAEYYINDAGRQMRILGGSILYRARQLG 183

Query: 93  NDAISIITSKNTQQFVKDTTR-LACLAPTH----QPRATNHIPQ--MIYLIQNIILHGHA 145
               +        +++ D  R    + P      +  A     +  M  ++Q I     A
Sbjct: 184 GLNPAEPEDYYRGEYITDIARDFMAMRPDLLDLPEADAVEACKEYGMGVILQGIKDDLAA 243

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK-------NPADFILWKRST 198
           +   ++I F   S+ N G       D    G                 +  D +L K + 
Sbjct: 244 FHVRHDIWFSEKSLVNDGKVDETFADLTASGMGYAADGAFWFKSTLLGDDKDRVLRKSNG 303

Query: 199 P-----MEPGW-ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
                  +  + ++ + RG                  V DI G       P     +A  
Sbjct: 304 DTTYFASDIAYHDNKFKRG---------------FDLVIDIWGADHHGYVPRM---MAAC 345

Query: 253 CCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
               +    + I ++   L  +G+   MS   G F T+ ++++          +   R  
Sbjct: 346 EALGKPGGLSVILVNLVNLLRDGQPIAMSTRAGQFETLKDVVDEVG-------SDAARFM 398

Query: 311 MLMTHYREPIDFTVQRLTE------------AEILLSKWPQTSTSKGIIDPAVLSALYND 358
            L       +DF ++ + +            A   +    + +   GI   AV       
Sbjct: 399 FLSRKSDSKLDFDLELVKQKSMDNPVYYVQYAHARIRSLDKKAEEAGIRPAAV------- 451

Query: 359 LNTVSAIQALH-KLARESTKNHDLLPIFNASAH 390
             + +++  L  +   E  K  D  P +  +A 
Sbjct: 452 --SPASLALLDTEWDLELLKLLDQYPDYVEAAA 482


>gi|307256065|ref|ZP_07537853.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
 gi|306865487|gb|EFM97382.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           10 str. D13039]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|293364314|ref|ZP_06611040.1| leucine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702720|ref|ZP_07639672.1| leucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291317160|gb|EFE57587.1| leucine-tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307623836|gb|EFO02821.1| leucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 833

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVTATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|288561333|ref|YP_003424819.1| leucyl-tRNA synthetase LeuS [Methanobrevibacter ruminantium M1]
 gi|288544043|gb|ADC47927.1| leucyl-tRNA synthetase LeuS [Methanobrevibacter ruminantium M1]
          Length = 957

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 45/120 (37%), Gaps = 10/120 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DL+  H    +         EK     +  G   LEG KMS S GN I + 
Sbjct: 578 PLDWRLSAKDLVGNHLSFLMFTHAAIYPEEKWPKGTVVFGMGLLEGNKMSSSKGNVILLA 637

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +E        + A V+RL ++ +   + +  D+  + +   +  L  + + +     I
Sbjct: 638 DAIE-------QYSADVVRLFLMASAEPW-QDFDWREKEVRGTQRRLEWFREFAQKVEDI 689



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 34/112 (30%), Gaps = 16/112 (14%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-----D 74
             +   + + V  P      HIG+ R   V DV  R  R            ++T      
Sbjct: 24  PNEKEKLFLTVAYPYPSGAMHIGHGRTYTVPDVFARFKRMEGYNVLFPMAWHVTGAPVIG 83

Query: 75  IDDKIIERA-----------RQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           I D+I  +            +  H ++P  +    I    + ++      + 
Sbjct: 84  IADRIKRKDPWTLDLYERVHKVPHDTLPSLEDPINIVKYFSNEYHTVMDDMG 135


>gi|228955020|ref|ZP_04117036.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228804646|gb|EEM51249.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|228941918|ref|ZP_04104462.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228974849|ref|ZP_04135411.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981442|ref|ZP_04141740.1| Leucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778267|gb|EEM26536.1| Leucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784853|gb|EEM32870.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817751|gb|EEM63832.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|326942523|gb|AEA18419.1| leucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|229193026|ref|ZP_04319982.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590473|gb|EEK48336.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|218899895|ref|YP_002448306.1| leucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226731225|sp|B7IL05|SYL_BACC2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218544919|gb|ACK97313.1| leucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|218231488|ref|YP_002369537.1| leucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229152938|ref|ZP_04281120.1| Leucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|226695100|sp|B7H798|SYL_BACC4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218159445|gb|ACK59437.1| leucine--tRNA ligase [Bacillus cereus B4264]
 gi|228630551|gb|EEK87198.1| Leucyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|32033773|ref|ZP_00134058.1| COG0060: Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|307247020|ref|ZP_07529074.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
 gi|306856472|gb|EFM88621.1| Isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           2 str. S1536]
          Length = 922

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 562 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 614

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 615 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 668

Query: 368 LHKLA 372
           L + A
Sbjct: 669 LDRWA 673


>gi|332532157|ref|ZP_08408040.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332038498|gb|EGI74942.1| isoleucyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 942

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C   +   L    D++  G D       + +  S   +       +  H   ++  GRKM
Sbjct: 550 CVVDAREDLVGPADLYLEGSDQHRGWFMSSMMTSVAINGHAPYRQVLTHGFTVDENGRKM 609

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I+   ++           A ++RL +  T Y   +  + +    +     +  
Sbjct: 610 SKSLGNVISPQNVMNKLG-------ADILRLWVASTDYTAEMTVSDEIFKRSADRYRRIR 662

Query: 339 QTST 342
            TS 
Sbjct: 663 NTSR 666


>gi|322388969|ref|ZP_08062540.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144338|gb|EFX39745.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 1218

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    S     Y   
Sbjct: 759 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPT 809

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 810 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPM 867

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 868 DVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 909


>gi|283853205|ref|ZP_06370457.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283571378|gb|EFC19386.1| leucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 837

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 15/122 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEI----AQSCCADR--IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H         A   C      E   N+ +  G +  +G KMSKS G
Sbjct: 533 PVDQYIGGIEHAILHLLYSRFFVKALRDCGYLAFDEPFQNL-LTQGMVIKDGSKMSKSKG 591

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  + ++         + A  +R+ +L      + ++++   +  A   LS+  +  T
Sbjct: 592 NVVDPDLMIGR-------YGADTVRVFILFAAPPEKDLEWSDTGIEGASRFLSRLWRLVT 644

Query: 343 SK 344
            +
Sbjct: 645 EE 646


>gi|163868324|ref|YP_001609533.1| methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161017980|emb|CAK01538.1| Methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 519

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 40/133 (30%), Gaps = 17/133 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R    +    +  + TD         + +  +  ++ 
Sbjct: 14  PNGHPHIGHAYSAIASDVLARFQRLNGKK---VFFLSGTD-----EHGLKMQQTAAALDM 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEAN 149
               +  +N+  F K    L C       R T         ++    + +  +G  Y   
Sbjct: 66  TPQQLADRNSAVFQKMLAVLNCSNDDF-IRTTEERHYQACQEIW---KKMEENGDIYLGR 121

Query: 150 NEIIFDTSSIPNY 162
               +       Y
Sbjct: 122 YTGWYSVRQEAYY 134


>gi|148242287|ref|YP_001227444.1| leucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|189083177|sp|A5GT82|SYL_SYNR3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147850597|emb|CAK28091.1| Leucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 864

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 48/165 (29%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ RL+R     K V +              A      I  
Sbjct: 47  PYPSGNLHMGHVRNYVITDVIARLMRLKG--KRVLHPMGWDAFGLPAENAA------IER 98

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T +N  Q  +   RL       +  AT H        Q      +    AY  
Sbjct: 99  GVDPADWTDRNIAQMREQLQRLGLSIDWSREVATCH-SDYYRWTQWLFLQFLNADLAYRK 157

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              + +D          +  ++D      R      K+    + L
Sbjct: 158 EATVNWDPIDQT---VLANEQVDADGRSWRSGALAEKRKLRQWFL 199


>gi|147920653|ref|YP_685547.1| leucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|110620943|emb|CAJ36221.1| leucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 937

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    I         +        NGFL L+G+KMS S GN  T+ 
Sbjct: 581 PFDLRNSGKDLVQNHLAFCIFNHTALFPEKYWPKGMSVNGFLQLDGQKMSTSKGNVHTLR 640

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYR----EPIDFTVQRLTEAEILLSKWPQTSTSK 344
            + +        + A   R+ ++   Y     E  ++  +    A   L++W + +   
Sbjct: 641 HICDL-------YGADATRMTLM---YGGEGLEDPNWDSEFARNAGPRLTQWYEFAVEN 689


>gi|78221572|ref|YP_383319.1| isoleucyl-tRNA synthetase [Geobacter metallireducens GS-15]
 gi|78192827|gb|ABB30594.1| Isoleucyl-tRNA synthetase [Geobacter metallireducens GS-15]
          Length = 923

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 40/96 (41%), Gaps = 8/96 (8%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H + +A S           +  H   ++  GRKMSKS GN +   E++       + + A
Sbjct: 570 HSSLLA-SVGTRGTAPYKEVLTHGFVVDGSGRKMSKSVGNVVAPEEVI-------KKYGA 621

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++RL +    YR+ +  + + LT       +   T
Sbjct: 622 EILRLWVAAQDYRDDVRISQEILTRLAEAYRRIRNT 657


>gi|328472070|gb|EGF42947.1| isoleucyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 942

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S     +     +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSVAMKGVAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|170695377|ref|ZP_02886523.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170139777|gb|EDT07959.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 863

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 39/120 (32%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++  N   +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANNVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|171463050|ref|YP_001797163.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|238692844|sp|B1XT72|SYL_POLNS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171192588|gb|ACB43549.1| leucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 890

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 40/138 (28%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              + Y C    Y     H+G+ R   + DV+ R LR       +          D    
Sbjct: 37  KKSKYYACSMLPYPSGKLHMGHVRNYTINDVMARQLRMQGYNVLMPMGW------DAFGM 90

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A  E+ +I      +  T  N     K    +  LA           P      Q    
Sbjct: 91  PA--ENAAIQNKVPPAKWTYDNIAYMKKQMAAMG-LAIDWSREVATCNPDYYRWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGIAYRKTQVVNWD 165


>gi|238797503|ref|ZP_04641001.1| Isoleucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238718644|gb|EEQ10462.1| Isoleucyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 39/104 (37%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN I+  E++             ++RL 
Sbjct: 576 IATAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTISPQEVMNKLG-------GDILRLW 628

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  T Y   I  + + L  +     +   T+     +    DPA
Sbjct: 629 VASTDYTGEIAVSDEILKRSADSYRRIRNTARFLLANLNGFDPA 672


>gi|322513918|ref|ZP_08066995.1| isoleucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322120253|gb|EFX92206.1| isoleucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|322380882|ref|ZP_08054961.1| isoleucyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321146686|gb|EFX41507.1| isoleucyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 863

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 8/121 (6%)

Query: 221 AMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           A+    LG    D+   G D      ++ +  SC          +  H   ++ +G KMS
Sbjct: 491 AVCEERLGVYPSDLVLEGSDQHRGWFQSSLLLSCIKHSKAPFKAVLTHGFTVDAKGHKMS 550

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN  ++ E+L       +++ + ++RL ++M  Y++ +  +     +      K   
Sbjct: 551 KSKGNVFSLEEVL-------KTYGSDILRLWVVMNDYQDNLSVSSAFFKQTSESYKKVRN 603

Query: 340 T 340
           T
Sbjct: 604 T 604


>gi|302754402|ref|XP_002960625.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
 gi|300171564|gb|EFJ38164.1| hypothetical protein SELMODRAFT_437676 [Selaginella moellendorffii]
          Length = 1707

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 18/140 (12%)

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W S  G  R  W                D++  G D      ++ +  S     +    
Sbjct: 729 SWASVLGTKR--W--------------PADVYLEGSDQHRGWFQSSLLTSVATKGVAPYR 772

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPI 320
            +  H   L+ +  KMSKS GN +    ++E  K       + A V+RL +    Y   +
Sbjct: 773 QVLTHGFVLDEKNVKMSKSLGNVVDPRSVIEGGKNQKEQPAYGADVLRLWVASVDYTGDV 832

Query: 321 DFTVQRLTEAEILLSKWPQT 340
               Q L +   +  K   T
Sbjct: 833 AIGPQILKQTADVYRKLRGT 852


>gi|228961008|ref|ZP_04122636.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228798641|gb|EEM45626.1| Leucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|227518203|ref|ZP_03948252.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074359|gb|EEI12322.1| valyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|222153465|ref|YP_002562642.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114278|emb|CAR42908.1| valyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 883

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW  E +     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDENAEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+ IH    + EGRKMSKS GN I   E++E        + A  +R  +
Sbjct: 495 SLEFTNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMEVVE-------KYGADALRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  A   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|165975502|ref|YP_001651095.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
 gi|165875603|gb|ABY68651.1| isoleucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
           3 str. JL03]
          Length = 922

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 562 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 614

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 615 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 668

Query: 368 LHKLA 372
           L + A
Sbjct: 669 LDRWA 673


>gi|152999655|ref|YP_001365336.1| isoleucyl-tRNA synthetase [Shewanella baltica OS185]
 gi|166229768|sp|A6WKD4|SYI_SHEB8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151364273|gb|ABS07273.1| isoleucyl-tRNA synthetase [Shewanella baltica OS185]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 663


>gi|89256533|ref|YP_513895.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115314961|ref|YP_763684.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|156502647|ref|YP_001428712.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|167010655|ref|ZP_02275586.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FSC200]
 gi|254367858|ref|ZP_04983878.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|254369479|ref|ZP_04985491.1| hypothetical protein FTAG_00467 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|122325026|sp|Q0BLI7|SYL_FRATO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123094508|sp|Q2A307|SYL_FRATH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231607|sp|A7NCQ3|SYL_FRATF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89144364|emb|CAJ79651.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           LVS]
 gi|115129860|gb|ABI83047.1| leucine--tRNA ligase [Francisella tularensis subsp. holarctica
           OSU18]
 gi|134253668|gb|EBA52762.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           257]
 gi|156253250|gb|ABU61756.1| leucyl-tRNA synthetase [Francisella tularensis subsp. holarctica
           FTNF002-00]
 gi|157122429|gb|EDO66569.1| hypothetical protein FTAG_00467 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 813

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNIVDPQELID-------KYGADTVRLFSMFAASPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +    +I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKVI 639



 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192


>gi|30249136|ref|NP_841206.1| isoleucyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|81436203|sp|Q820M6|SYI_NITEU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|30180455|emb|CAD85060.1| t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase [Nitrosomonas
           europaea ATCC 19718]
          Length = 939

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 39/111 (35%), Gaps = 15/111 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +G KMSKS GN I   ++ +T         A ++RL + 
Sbjct: 587 CAIDGCAPYTALLTHGFVVDGQGYKMSKSKGNVIAPQKIADTLG-------ADILRLWVA 639

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
            T Y   +  + + L        +   T           L A   D N  +
Sbjct: 640 STDYSGELSISDEILKRTVETYRRIRNTLR--------FLLANLADFNLAA 682



 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERARQE 86
           GP  Y     HIG+A   I+ D++ +       +           +  I+ +I ++  + 
Sbjct: 57  GP-PYANGDIHIGHAVNKILKDIIIKSKTLSGFDAPYVPGWDCHGLP-IEHQIEKKYGKH 114

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHG 143
            P+  +         +   +   D  RL  L     P  T +      +I  +  I  +G
Sbjct: 115 LPADQVRKLCRAFAQEQIDRQKADFMRLGVLGDWEHPYLTMNYAIEAGIIRALGKIFRNG 174

Query: 144 HAYEANNEIIFDTS 157
           H Y+    + +   
Sbjct: 175 HLYQGQKPVNWCID 188


>gi|318041444|ref|ZP_07973400.1| leucyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 885

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 52/165 (31%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R     K V +     D      E A  E    P 
Sbjct: 45  PYPSGNLHMGHVRNYVITDVVARVQRLRG--KKVLHPMGW-DAFGLPAENAAIERGVDPG 101

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T +N     +   +L       +  AT H        Q      +  G AY+ 
Sbjct: 102 G-----WTDQNIASMREQLNQLGLSIDWDREVATCHADYY-RWTQWLFLQFLEAGLAYQK 155

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
           +  + +D          +  ++D +    R      K+    + L
Sbjct: 156 DATVNWDPIDQT---VLANEQVDSEGRSWRSGALVEKRKLRQWFL 197


>gi|315931151|gb|EFV10124.1| Methionine-tRNA ligase [Campylobacter jejuni subsp. jejuni 327]
          Length = 187

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I+ D L R  R    E    ++    +   KI E A+        N 
Sbjct: 11  VNDVPHLGHAYTTIIADTLARFYRLQGHE--TRFLTGTDEHGQKIEEAAKLR------NS 62

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  K + +F K              R T+  HI  +  +   +   G  Y  E   
Sbjct: 63  TPQEYADKISFEFKKLWDEFEITY-DIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEYEG 121

Query: 151 EIIFDTSSI 159
                  S 
Sbjct: 122 HYCISCESF 130


>gi|307354269|ref|YP_003895320.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157502|gb|ADN36882.1| isoleucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 1054

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 12/87 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        + +H   L+ +GRKMSKS GN +T  E++E            V+R+ +
Sbjct: 566 STIAFDRAPYKKVMMHGFSLDSDGRKMSKSLGNVVTPEEIIERVGV-------DVLRMYI 618

Query: 312 LMTHYREPID---FTVQRLTEAEILLS 335
           L      P D   F  + +      ++
Sbjct: 619 LSAS--APWDDLKFNWEGVKTTNRAMN 643


>gi|306825946|ref|ZP_07459284.1| leucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304431878|gb|EFM34856.1| leucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 833

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 70/213 (32%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I                      + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIATENNGALDKVYNETVKAVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  EV +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEEVWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|282897916|ref|ZP_06305911.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197060|gb|EFA71961.1| Leucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 859

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y      Y     H+G+ R   + DV+ RL R       V +        
Sbjct: 30  TPQDKNQPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFG 87

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   RL  L+   +       P      
Sbjct: 88  LPAENAA------IDRGVPPAKWTYQNINQMRQQLQRLG-LSLDWEAEVATCSPDYYRWT 140

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q      +  G AY+    + +D
Sbjct: 141 QWIFLQFLAAGLAYQKEAAVNWD 163


>gi|150865514|ref|XP_001384764.2| cytosolic leucyl tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
 gi|149386770|gb|ABN66735.2| cytosolic leucyl tRNA synthetase [Scheffersomyces stipitis CBS
           6054]
          Length = 1093

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 27/144 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 681 PLDVRISGKDLIPNHLTFFIYTHVALFPRQFWPQGIRANGHLMLNNAKMSKSTGNFMTLE 740

Query: 290 ELLETKKFGGRSWPAPVIRLAML----MTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
           +++E        + A   R+A+          E  +F       A + L+   +      
Sbjct: 741 QIVE-------KFGADASRIALADAGDSV---EDANFDESNANAAILRLTTLKEWCEEVA 790

Query: 340 -------TSTSKGIIDPAVLSALY 356
                  T  +    D A  + + 
Sbjct: 791 KTKDSLRTGPTDSFFDQAFENEMN 814


>gi|113460332|ref|YP_718393.1| isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|122945180|sp|Q0I1V8|SYI_HAES1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|112822375|gb|ABI24464.1| Isoleucyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 937

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 577 STATNNKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  + + L  A     +   T+     +    DP       NDL     + +
Sbjct: 630 ASTDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNGFDPK------NDLVNPEEMIS 683

Query: 368 LHKLA 372
           L + A
Sbjct: 684 LDRWA 688


>gi|42783928|ref|NP_981175.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206977281|ref|ZP_03238178.1| leucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217962228|ref|YP_002340798.1| leucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222098211|ref|YP_002532268.1| leucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|229141476|ref|ZP_04270012.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|229198904|ref|ZP_04325595.1| Leucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|60390720|sp|Q72YY8|SYL_BACC1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226695249|sp|B7HSS7|SYL_BACC7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782484|sp|B9J1E1|SYL_BACCQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|42739858|gb|AAS43783.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|206744432|gb|EDZ55842.1| leucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217064989|gb|ACJ79239.1| leucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221242269|gb|ACM14979.1| leucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|228584607|gb|EEK42734.1| Leucyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228641961|gb|EEK98256.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|315304010|ref|ZP_07874447.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
 gi|313627619|gb|EFR96315.1| isoleucine--tRNA ligase [Listeria ivanovii FSL F6-596]
          Length = 921

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN I   +++       +   A ++RL +
Sbjct: 568 AVAVTGESPYRNVLSHGFALDGEGRKMSKSLGNTILPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|254455824|ref|ZP_05069253.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082826|gb|EDZ60252.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 896

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC         +I  H   ++ +G KMSKS GN I   ++L       + + A ++R+ +
Sbjct: 565 SCGTRGRAPFESILSHGFVVDGKGLKMSKSLGNVIAPEDIL-------KKYGADILRIWV 617

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             ++Y E +      L +      K   T
Sbjct: 618 ASSNYAEDLRIDHSILDQHAESYRKIRNT 646


>gi|46580460|ref|YP_011268.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46449879|gb|AAS96528.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234204|gb|ADP87058.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 663

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 57/181 (31%), Gaps = 40/181 (22%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H    D++ PH          A  +E   N+ +H  +L +   KMSKS GN ++  E+++
Sbjct: 255 HLVAKDILKPHAVFWPTMLKAA-GLEPYNNLNVHGYWL-VRDTKMSKSLGNVVSPLEMID 312

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-----TEAEILLSKWP--------- 338
                   +     R  +L   H+     F+ + L      +    L             
Sbjct: 313 R-------YGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGNLYSRVLSMTAK 365

Query: 339 ----------QTSTSKGIIDPAVLSALYNDLN------TVSAIQALHKLARESTKNHDLL 382
                       +     +      A  N  N        +A+++L +L R   K  D  
Sbjct: 366 YFGGVVPAPGAYTEEDETLRALAAEAQRNFCNLFGRVRFSNALESLWELVRALNKYVDSA 425

Query: 383 P 383
            
Sbjct: 426 A 426



 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D + R  R     K   ++    +  DKI++ A +         
Sbjct: 13  VNAKPHLGHAYTTIVADSMRRFQRLLG--KDTYFLTGTDEHGDKIVQAAEK------AGV 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN--N 150
           +        + QF      L         R T   H   +   +Q +   G  Y      
Sbjct: 65  SPKDFVDGVSGQFRDLWPHLGVEY-DQFIRTTDPEHKKVVQAFLQRVYDSGDIYFGEYGG 123

Query: 151 EIIFDTSSI 159
              +     
Sbjct: 124 HYCYGCERF 132


>gi|30022810|ref|NP_834441.1| leucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048442|ref|ZP_04194008.1| Leucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229112203|ref|ZP_04241743.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229130018|ref|ZP_04258982.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147309|ref|ZP_04275659.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|296505206|ref|YP_003666906.1| leucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|33301671|sp|Q816T0|SYL_BACCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29898369|gb|AAP11642.1| Leucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228636141|gb|EEK92621.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653462|gb|EEL09336.1| Leucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228671187|gb|EEL26491.1| Leucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228722903|gb|EEL74282.1| Leucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326258|gb|ADH09186.1| leucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|16127979|ref|NP_422543.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221236801|ref|YP_002519238.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|32171583|sp|Q9A217|SYL_CAUCR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782490|sp|B8GW27|SYL_CAUCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13425523|gb|AAK25711.1| leucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220965974|gb|ACL97330.1| leucyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 861

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 40/140 (28%), Gaps = 13/140 (9%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           I+    + YV    P      H+G+ R   + DV+ R  R       V +     D    
Sbjct: 28  INDGRPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFN--VLHPMGW-DAFGM 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
             E A  E    P        T  N     +    L       +  AT    +  +    
Sbjct: 85  PAENAAMERGVHPKG-----WTYDNIAAMREQLKSLGISVDWSREFATCDPEYYGKQQAW 139

Query: 136 IQNIILHGHAYEANNEIIFD 155
              ++  G  Y     + +D
Sbjct: 140 FLRLLKRGLVYRKEASVNWD 159


>gi|26554335|ref|NP_758269.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|81747446|sp|Q8EUN9|SYI_MYCPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|26454344|dbj|BAC44673.1| isoleucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 900

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 58/163 (35%), Gaps = 25/163 (15%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           S + +  LG   D++  G D       + +  S  A +      +  H   L+  G KMS
Sbjct: 534 SVLQADKLGYPADLYFEGKDQFRGWFNSSLITSVAAFKKSPYKELLTHGFVLDENGNKMS 593

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN I   ++        + + A V+RL +    + + +  +   + +   L  +   
Sbjct: 594 KSLGNIIDPLQVC-------KEYGADVLRLWVASVDFSKDVSISKDIIAQNAELYRRIRN 646

Query: 340 T------------------STSKGIIDPAVLSALYNDLNTVSA 364
           T                         D  VLS L ND+ T+ A
Sbjct: 647 TLFRFILGNLNGFNLKKLRGAKYSEADLYVLSCLSNDIKTIKA 689


>gi|315221950|ref|ZP_07863861.1| isoleucine--tRNA ligase [Streptococcus anginosus F0211]
 gi|315188916|gb|EFU22620.1| isoleucine--tRNA ligase [Streptococcus anginosus F0211]
          Length = 930

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 68/178 (38%), Gaps = 19/178 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        R + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------ERQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L +      K   T      +    +P   +  Y+DL TV     
Sbjct: 623 TSVDSSNDVRISMDILGQVSETYRKIRNTLRFLIANTSDFNPKEDAVAYDDLRTVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL--VQERL 417
           +      K  RE+  + + L I+ A  + + +++   +L+    +  IE    ++ R 
Sbjct: 683 VRFNQLVKTIREAYADFEFLDIYKALVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQ 740


>gi|160874276|ref|YP_001553592.1| isoleucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|189082331|sp|A9L4U7|SYI_SHEB9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160859798|gb|ABX48332.1| isoleucyl-tRNA synthetase [Shewanella baltica OS195]
 gi|315266509|gb|ADT93362.1| isoleucyl-tRNA synthetase [Shewanella baltica OS678]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 663


>gi|53980842|gb|AAV24763.1| unknown protein [Oryza sativa Japonica Group]
 gi|215767767|dbj|BAG99995.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 478

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    I               +  N  L L   KMSKS GNF T+ 
Sbjct: 327 PFDLRISGKDLMQNHLAFCIFNHTTLLPKHHWPRGFRCNRHLLLNSEKMSKSTGNFRTLR 386

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + +   R A+
Sbjct: 387 QAIE-------EFSSDATRFAL 401


>gi|311250426|ref|XP_003124117.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Sus scrofa]
          Length = 1176

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 43/135 (31%), Gaps = 41/135 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DLI  H      N +A           A     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLIPNHLSYFLYNHVAMWPEESDKWPVAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ E L+        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTEALD-------KYSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYN 357
                D   + A+ +
Sbjct: 752 -----DANFVEAMAD 761


>gi|304412576|ref|ZP_07394181.1| isoleucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|307303592|ref|ZP_07583345.1| isoleucyl-tRNA synthetase [Shewanella baltica BA175]
 gi|304349052|gb|EFM13465.1| isoleucyl-tRNA synthetase [Shewanella baltica OS183]
 gi|306912490|gb|EFN42913.1| isoleucyl-tRNA synthetase [Shewanella baltica BA175]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 663


>gi|256761215|ref|ZP_05501795.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256682466|gb|EEU22161.1| valyl-tRNA synthetase [Enterococcus faecalis T3]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|237753253|ref|ZP_04583733.1| isoleucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375520|gb|EEO25611.1| isoleucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 928

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +      +I  H   ++  G KMSKS GN I   ++L       + + + ++RL +
Sbjct: 589 SCAINECAPYQSILTHGFTMDENGEKMSKSKGNVIPPEKVL-------KDFGSEILRLWV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+     +   L +      K   T
Sbjct: 642 AQSDYQNDQRISENILKQVSDNYRKIRNT 670


>gi|188475811|gb|ACD50073.1| putative leucyl-tRNA synthetase [uncultured crenarchaeote MCG]
          Length = 960

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 8/95 (8%)

Query: 221 AMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           +M + +L    FD+     +L+  H    I         +        NG L +EG++M 
Sbjct: 573 SMRNEFLYWYPFDLRVSAKELVPNHLTFCIFHHAALFPSKHWPRAMGVNGMLMIEGKQMH 632

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           KS GNFIT+   ++        + A   R A+L+ 
Sbjct: 633 KSKGNFITMKGAVDR-------YGADATRCALLLG 660


>gi|217974391|ref|YP_002359142.1| isoleucyl-tRNA synthetase [Shewanella baltica OS223]
 gi|254782433|sp|B8EFC7|SYI_SHEB2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217499526|gb|ACK47719.1| isoleucyl-tRNA synthetase [Shewanella baltica OS223]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 663


>gi|126173298|ref|YP_001049447.1| isoleucyl-tRNA synthetase [Shewanella baltica OS155]
 gi|166229767|sp|A3D1G5|SYI_SHEB5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125996503|gb|ABN60578.1| Isoleucyl-tRNA synthetase [Shewanella baltica OS155]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.010,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHGVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSIGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPQTVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 663


>gi|320354044|ref|YP_004195383.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122546|gb|ADW18092.1| arginyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 549

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 54/338 (15%), Positives = 101/338 (29%), Gaps = 56/338 (16%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           R + EF + +P+       GP       +G+ R  ++ D + RLL          Y  N 
Sbjct: 121 RVLVEFVSANPT-------GP-----LSVGHGRNAVLGDTIARLLTASGYAVQREYYFND 168

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-----THQ----- 122
                +++  + +      +  A +         ++ D  R             +     
Sbjct: 169 AGRQMRVLGESTRARYLELLGLANTFPEDGYQGDYIYDIARAMIDEAGDGFKDAELAVFK 228

Query: 123 PRATNHIPQMIYLIQNIILHGH-AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            RA   I   I      I  G   Y   + +  D            + ++E +    V E
Sbjct: 229 ERAQRAIFADIDATLKRIGIGFDTYFNEHTLYEDGRV--------NQVVEELRAKNLVYE 280

Query: 182 KYHKKNPADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGG 237
           K           W ++T      +       G P + +   A       + +D  I+  G
Sbjct: 281 KEG-------ATWFKTTEFGQEQDRVIIKSSGEPTYRLPDIAYHCDKFKRGYDWMINVFG 333

Query: 238 LDLIFPHHENEIAQSCCADRIEK---TANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
            D I     + +A        +               + +  KMS     F+T++EL++ 
Sbjct: 334 SDHIAT-VPDVLAGVRALGHDDSRITVVLYQFVTLLRDGKQVKMSTRKATFVTVDELVDE 392

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
                       +R   LM   R+P +     L  A+ 
Sbjct: 393 VG-------PDALRFFFLM---RKPDNLIEFDLDLAKK 420


>gi|223040430|ref|ZP_03610704.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878280|gb|EEF13387.1| leucyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 823

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G +  +G+KMSKS GN +  ++++         + A   RL +L     +
Sbjct: 574 EPFERL-LTQGMVLKDGKKMSKSKGNVVDPDDIIN-------KYGADTARLFILFAAPPQ 625

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTS 343
           + +++    +  A   +++  + S  
Sbjct: 626 KELEWNDSAVEGAFRFINRLYERSAG 651



 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 38/144 (26%), Gaps = 26/144 (18%)

Query: 17  EFQAID----PSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           EF+  D    P    + M+   P      H+G+ R   + D L R  R       V +  
Sbjct: 25  EFEPKDDYSLPKKYILSMF---PYPSGRIHMGHVRNYTIGDALARYYRKRGYN--VLHPI 79

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC------LAPTHQPR 124
                       A +            I T +N      +   L           T  P 
Sbjct: 80  GFDSFGMPAENAAIKHKIH------PKIWTYENIDYMRGELEALGLSFSKKREFATSDPL 133

Query: 125 ATNHIPQMIYLIQNIILHGHAYEA 148
            T    +  + I  +   G  Y  
Sbjct: 134 YTKF--EQEFFI-KMYEKGLVYRK 154


>gi|88800791|ref|ZP_01116348.1| isoleucyl-tRNA synthetase [Reinekea sp. MED297]
 gi|88776497|gb|EAR07715.1| isoleucyl-tRNA synthetase [Reinekea sp. MED297]
          Length = 829

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +   +       +  H   ++ +G KMSKS GN +   E+          + A ++RL +
Sbjct: 469 AVAINGTAPYKQVLTHGFVVDEKGYKMSKSLGNGMEPQEVFN-------QFGADILRLWV 521

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               Y   + F+   L  +     +   T+ 
Sbjct: 522 ASADYSGDMAFSRDILKRSADSYRRIRNTAR 552


>gi|116493039|ref|YP_804774.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|116103189|gb|ABJ68332.1| valyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 888

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 52/131 (39%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          ++ +H    + 
Sbjct: 469 GWPDENSADFKRYFPTSTLV--TGYDIIFFWVARMIFQSLEFTGKRPFKDVLLHGLIRDE 526

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   ++++        + A  +R  +    T   + + F+  ++  A 
Sbjct: 527 QGRKMSKSLGNGIDPMDVID-------KYGADALRWFLSNGSTA-GQDLRFSYDKMDSAW 578

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 579 NFINKIWNASR 589


>gi|222083048|ref|YP_002542413.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221727727|gb|ACM30816.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 521

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 10/69 (14%)

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE--PID 321
           I++H G+L ++GRK+ KS GN I  + L+E  +          +R  +L  H R     D
Sbjct: 290 IFVH-GYLTVDGRKIGKSAGNGIDPDGLVEYYQ------TPDALRYYLLR-HIRSADDGD 341

Query: 322 FTVQRLTEA 330
           F+ +RL  A
Sbjct: 342 FSEERLEAA 350


>gi|222630819|gb|EEE62951.1| hypothetical protein OsJ_17758 [Oryza sativa Japonica Group]
          Length = 841

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    I               +  N  L L   KMSKS GNF T+ 
Sbjct: 690 PFDLRISGKDLMQNHLAFCIFNHTTLLPKHHWPRGFRCNRHLLLNSEKMSKSTGNFRTLR 749

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + +   R A+
Sbjct: 750 QAIE-------EFSSDATRFAL 764


>gi|125551486|gb|EAY97195.1| hypothetical protein OsI_19117 [Oryza sativa Indica Group]
          Length = 841

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    I               +  N  L L   KMSKS GNF T+ 
Sbjct: 690 PFDLRISGKDLMQNHLAFCIFNHTTLLPKHHWPRGFRCNRHLLLNSEKMSKSTGNFRTLR 749

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + +   R A+
Sbjct: 750 QAIE-------EFSSDATRFAL 764


>gi|39998226|ref|NP_954177.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
 gi|81701102|sp|Q747X9|SYI_GEOSL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|39985172|gb|AAR36527.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens PCA]
          Length = 923

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H + +A S     +     +  H   ++  GRKMSKS GN +   E++       + + A
Sbjct: 570 HSSLLA-SVGTRGVAPYREVLTHGFVVDGSGRKMSKSVGNVVAPEEVI-------KKYGA 621

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++RL +    YR+ +  + + LT       +   T
Sbjct: 622 EILRLWVAAQDYRDDVRISQEILTRLAEAYRRIRNT 657


>gi|330832310|ref|YP_004401135.1| valyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329306533|gb|AEB80949.1| valyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 883

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    Y      +   G D+IF      I QS      +   N+ IH    + 
Sbjct: 459 GWPDENAADFQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGSQPFKNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 517 EGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 568

Query: 332 ILLSKW 337
             ++K 
Sbjct: 569 NFINKI 574


>gi|315150958|gb|EFT94974.1| valyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|307288317|ref|ZP_07568312.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306500703|gb|EFM70025.1| valyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|315165976|gb|EFU09993.1| valyl-tRNA synthetase [Enterococcus faecalis TX1302]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|295114302|emb|CBL32939.1| valyl-tRNA synthetase [Enterococcus sp. 7L76]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|257080637|ref|ZP_05574998.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|307290155|ref|ZP_07570074.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|256988667|gb|EEU75969.1| valyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|306498783|gb|EFM68281.1| valyl-tRNA synthetase [Enterococcus faecalis TX0411]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|255974415|ref|ZP_05425001.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|307281862|ref|ZP_07562078.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|255967287|gb|EET97909.1| valyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|306503893|gb|EFM73114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0860]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|255970840|ref|ZP_05421426.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256958166|ref|ZP_05562337.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300860819|ref|ZP_07106906.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|307275085|ref|ZP_07556239.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|312899334|ref|ZP_07758668.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312952220|ref|ZP_07771097.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|255961858|gb|EET94334.1| valyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|256948662|gb|EEU65294.1| valyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|300849858|gb|EFK77608.1| valine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|306508203|gb|EFM77319.1| valyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|310629807|gb|EFQ13090.1| valyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|311293536|gb|EFQ72092.1| valyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315036220|gb|EFT48152.1| valyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|315154542|gb|EFT98558.1| valyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315160097|gb|EFU04114.1| valyl-tRNA synthetase [Enterococcus faecalis TX0312]
 gi|315169319|gb|EFU13336.1| valyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315174736|gb|EFU18753.1| valyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|229547604|ref|ZP_04436329.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|229548188|ref|ZP_04436913.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|256852478|ref|ZP_05557854.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|257091151|ref|ZP_05585512.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|312902616|ref|ZP_07761821.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|229306667|gb|EEN72663.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|229307294|gb|EEN73281.1| valyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|256712332|gb|EEU27364.1| valyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256999963|gb|EEU86483.1| valyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|310633954|gb|EFQ17237.1| valyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|315030884|gb|EFT42816.1| valyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315163283|gb|EFU07300.1| valyl-tRNA synthetase [Enterococcus faecalis TX0645]
 gi|315578975|gb|EFU91166.1| valyl-tRNA synthetase [Enterococcus faecalis TX0630]
          Length = 880

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|70726164|ref|YP_253078.1| leucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|123762321|sp|Q4L7A3|SYL_STAHJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68446888|dbj|BAE04472.1| leucyl-rRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 804

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 56/178 (31%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++++         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDDIVDSHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYN---------------DLNTVS---AIQALHKLARESTKNHDL 381
              G +   ++    N               D NT++   AI  L     +  K   +
Sbjct: 636 NEDGSLSNKIVENNDNGLDKVYNQTVKKVTEDFNTLNFNTAISQLMVFINDCYKAETI 693


>gi|37523650|ref|NP_927027.1| leucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|48428525|sp|Q7NE01|SYL_GLOVI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|35214655|dbj|BAC92022.1| leucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 847

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/174 (16%), Positives = 48/174 (27%), Gaps = 26/174 (14%)

Query: 23  PSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
               + Y      Y     H+G+ R   + DV+ R  R               ++   I 
Sbjct: 27  DGRPKFYALSMFPYPSGALHMGHVRNYSITDVISRYKRMRGF-----------NVLHPIG 75

Query: 81  ERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
             A     E+ +I      +  T +N  Q  +   RL       +  AT   P      Q
Sbjct: 76  WDAFGLPAENAAIDRGIHPAQWTEQNIAQMREQLKRLGFAYAWEREVATCS-PAYYRWTQ 134

Query: 138 NII----LHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +       G AY     +              +  ++D +    R      K+
Sbjct: 135 KLFLEFWKAGLAYRKAGVVNWDPVDQT----VLANEQVDAEGRSWRSGALVEKR 184


>gi|170718689|ref|YP_001783409.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189082325|sp|B0UV12|SYI_HAES2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|168826818|gb|ACA32189.1| isoleucyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 937

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 577 STATNNKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  + + L  A     +   T+     +    DP       NDL     + +
Sbjct: 630 ASTDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNGFDPK------NDLVNPEEMIS 683

Query: 368 LHKLA 372
           L + A
Sbjct: 684 LDRWA 688


>gi|223932581|ref|ZP_03624581.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223898691|gb|EEF65052.1| valyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 883

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 12/126 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    Y      +   G D+IF      I QS      +   N+ IH    + 
Sbjct: 459 GWPDENAADFQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGSQPFKNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 517 EGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 568

Query: 332 ILLSKW 337
             ++K 
Sbjct: 569 NFINKI 574


>gi|282164441|ref|YP_003356826.1| leucyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156755|dbj|BAI61843.1| leucyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 938

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 14/119 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    I         +        NGFL L+G+KMS S GN  T+ 
Sbjct: 581 PFDMRCSGKDLVQNHLSFCIFNHTAIFPEKYWPQGMGVNGFLQLDGQKMSSSKGNIYTLR 640

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYR----EPIDFTVQRLTEAEILLSKWPQTSTSK 344
           ++ E        + A   RL ++   Y     E  ++  +    A   L++W   +   
Sbjct: 641 QVTEM-------YGADATRLTLM---YGGEGLEDPNWDSEFARTAGPKLAQWYDFALEN 689


>gi|239932605|ref|ZP_04689558.1| hypothetical protein SghaA1_30568 [Streptomyces ghanaensis ATCC
           14672]
 gi|291440967|ref|ZP_06580357.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343862|gb|EFE70818.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 254

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 51/139 (36%), Gaps = 10/139 (7%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           L++ G   +  +G  + +  +              V+RL +L      P+      L +A
Sbjct: 111 LHVVGEGGAAPDGVRVAVAPVHWEAPGPPGDTDPAVLRLVLLAQPRSTPLRVDRAALDDA 170

Query: 331 EILLSKWPQTSTS---------KGIIDPAVLSALYNDLNTVSAIQALHKLARES-TKNHD 380
              L+ W +   +            +   + +A  +DL     ++ LH +  ++   +  
Sbjct: 171 GDTLAHWRRAVAAWAHRPSRPIPDRVRADLRAAWEDDLEAAGVLRVLHAVEGDADLADGA 230

Query: 381 LLPIFNASAHILGIEVCKE 399
               +  +  +LG+++ ++
Sbjct: 231 RFETYAYADRLLGLDLTRD 249


>gi|239930094|ref|ZP_04687047.1| methionyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291438432|ref|ZP_06577822.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
 gi|291341327|gb|EFE68283.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
          Length = 538

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 12/156 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R    +         TD   + I R  + +   P   
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRGEKVWFL---TGTDEHGQKIMRTAEANGVSPQEW 79

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A  ++T      +      L   A     R T   H  ++   +Q++   G  Y+   E 
Sbjct: 80  ADKLVTESWEPLW----AHLEI-ANDDFIRTTQKRHTDRVQEFVQDLYDKGEIYKGGYEG 134

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
            +       Y       +D +            K P
Sbjct: 135 PYCVG-CEEY-KLPGELLDGEGEYAGQKLCPIHKKP 168


>gi|298507162|gb|ADI85885.1| isoleucyl-tRNA synthetase [Geobacter sulfurreducens KN400]
          Length = 923

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H + +A S     +     +  H   ++  GRKMSKS GN +   E++       + + A
Sbjct: 570 HSSLLA-SVGTRGVAPYREVLTHGFVVDGSGRKMSKSVGNVVAPEEVI-------KKYGA 621

Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++RL +    YR+ +  + + LT       +   T
Sbjct: 622 EILRLWVAAQDYRDDVRISQEILTRLAEAYRRIRNT 657


>gi|167623065|ref|YP_001673359.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189082332|sp|B0TJA9|SYI_SHEHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167353087|gb|ABZ75700.1| isoleucyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 940

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFHGHDIDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGQGRKMSKSVGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I+   +            A ++RL +  T Y   +  + Q L  +     +   T+ 
Sbjct: 613 VISPQHVTNKLG-------ADILRLWVAATDYSGEMTVSDQILNRSADAYRRIRNTAR 663


>gi|153009409|ref|YP_001370624.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151561297|gb|ABS14795.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 515

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     K V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGKDVFFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + + +  +G  Y+      +  
Sbjct: 71  LADRNTAAFRQMADVLNSSNDD-YIRTSEERHYKASQAIWKAMAGNGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 51/147 (34%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I    L+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSLGNVIDPFGLVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLSKWPQ------------TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS   +            +   K I+D A      
Sbjct: 339 YSHDAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPVPGEFSDADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|220936373|ref|YP_002515272.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|254782451|sp|B8GQR1|SYI_THISH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219997683|gb|ACL74285.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 937

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 46/116 (39%), Gaps = 7/116 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D      ++ +  S           +  H   ++ +G+KMSKS GN +
Sbjct: 551 LGLPADLYLEGSDQHRGWFQSSLLTSVAMRGTAPYKAVLTHGFTVDAQGQKMSKSKGNVV 610

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
              ++++T         A ++RL +  T Y   +  + + L        +   T+ 
Sbjct: 611 APQKVVDTLG-------ADILRLWVAATDYSAEMAVSDEILKRTADAYRRMRNTAR 659


>gi|229175455|ref|ZP_04302966.1| Leucyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228607987|gb|EEK65298.1| Leucyl-tRNA synthetase [Bacillus cereus MM3]
          Length = 802

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|19704603|ref|NP_604165.1| methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|25009363|sp|Q8RE57|SYM_FUSNN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|19714899|gb|AAL95464.1| Methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 636

 Score = 46.4 bits (109), Expect = 0.011,   Method: Composition-based stats.
 Identities = 70/435 (16%), Positives = 129/435 (29%), Gaps = 112/435 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +         +V  + +   K+ + A+Q         
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMG--MDTHFVTGLDEHGQKVEQAAKQNGF------ 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL----HGHAYEANN 150
                T K T  F      L         R T    +    ++ I+      G  Y+   
Sbjct: 66  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTE--DRHKKAVKRILDIVNAKGDIYKGEY 122

Query: 151 EIIFDTS--------------SIPNYGS-FSRRKID----EQKMGTRVPEKYHKKNPADF 191
           E  +  S                P+ G   +  K +    +         K+  ++P DF
Sbjct: 123 EGKYCVSCETFFPENQLNGSNKCPDCGKDLTVLKEESYFFKMSKYADALLKHIDEHP-DF 181

Query: 192 ILWKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHY 226
           IL          +            + +  G P      HI            ++     
Sbjct: 182 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAGFEN 241

Query: 227 LGKVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGR 276
               FD        +H  G D+I  H         C       K  +  + +G+   EG 
Sbjct: 242 DENKFDKFWNNSRVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-------- 327
           KMSKS GN +   + +       + +     R  +L   ++    D++ + +        
Sbjct: 298 KMSKSRGNVVNPYDEI-------KKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDL 350

Query: 328 -TEAEILLSK--------WPQTSTSKGIIDP--AVLSALYND-----------LNTVSAI 365
             +   LL++        +  T  S   ++P    + +++ND                A+
Sbjct: 351 ANDLGNLLNRTLGMYKKYFNGTIVSSSTVEPIDDEIKSMFNDVVKDVEKYMYLFEFSRAL 410

Query: 366 QALHKLARESTKNHD 380
           + + K      K  D
Sbjct: 411 ETIWKFISRLNKYID 425


>gi|283850384|ref|ZP_06367673.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574410|gb|EFC22381.1| isoleucyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 941

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +     +  H   ++ +GRKMSKS GN +   E+++          A ++RL      Y
Sbjct: 589 GVAPYRQVLTHGYVVDGDGRKMSKSLGNGMEPQEIIDKHG-------AEILRLWTSAVDY 641

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+ I  + + L        +   T
Sbjct: 642 RDDIRISDEILARLVEAYRRIRNT 665


>gi|240948306|ref|ZP_04752692.1| isoleucyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240297345|gb|EER47886.1| isoleucyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 937

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 577 STATNGKAPYKQVLTHGFVVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 630 ASTDYTGEIAVSHNILNSAGESYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 683

Query: 368 LHKLA 372
           L + A
Sbjct: 684 LDRWA 688


>gi|110679355|ref|YP_682362.1| isoleucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|109455471|gb|ABG31676.1| isoleucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 997

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 57/179 (31%), Gaps = 16/179 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 651 QSVGTTGRSPYRNVVTHGFTLDEKGMKMSKSLGNTIVPEKIV-------QQYGADILRLW 703

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-KGIIDPAVLSALYNDLNTVSA----- 364
           +  T Y        + L        +   T     G +     S   +  +         
Sbjct: 704 VAQTDYTLDQRIGPEILKGVADSYRRLRNTMRYMLGSLTDFTQSDRMDPADMPELERWVL 763

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERLILL 420
             +  L K  R+    +D   +F A      +++   + +        +    +R    
Sbjct: 764 HRLAELDKTVRDGYAAYDFQGVFQAVFTFATVDLSAFYFDIRKDALYCDGDTVQRRAAR 822


>gi|269125396|ref|YP_003298766.1| hypothetical protein Tcur_1143 [Thermomonospora curvata DSM 43183]
 gi|268310354|gb|ACY96728.1| hypothetical protein Tcur_1143 [Thermomonospora curvata DSM 43183]
          Length = 213

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 10/105 (9%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
                   + + ++ +  +            +R+AML   YREP+    Q   +A   L 
Sbjct: 78  ETACPKAAHLMLVHPIEPSSLSSLADEDPVTLRMAMLSAPYREPLRLPEQA-ADARARLG 136

Query: 336 KWPQTSTSKGIIDPAVLS---------ALYNDLNTVSAIQALHKL 371
           +W              +S         AL  DL++ +A+  L +L
Sbjct: 137 RWRALLAEWARSPGRPMSRRHAADAEAALAQDLDSPAALAVLEEL 181


>gi|227544234|ref|ZP_03974283.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300908230|ref|ZP_07125696.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
 gi|227185787|gb|EEI65858.1| valyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
 gi|300894657|gb|EFK88013.1| valine--tRNA ligase [Lactobacillus reuteri SD2112]
          Length = 907

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P D   W++   +   W S   W     GW    SA    Y      +   G D+IF   
Sbjct: 462 PKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLV--TGYDIIFFWV 519

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++       + +   
Sbjct: 520 SRMIFQSLEFTGQAPFKNVLLHGLIRDEQGRKMSKSLGNGIDPMDVI-------KKYGVD 572

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+  ++  A   ++K    S 
Sbjct: 573 ALRWFLITGSTPGQDIRFSYTKMDAAWNFINKIWNASR 610


>gi|88604156|ref|YP_504334.1| leucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189618|gb|ABD42615.1| leucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 924

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 28/168 (16%)

Query: 222 MSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           M   +L    +D      DLI  H   ++   C     E   +  +  G   L G KMS 
Sbjct: 549 MRKEFLYWYPYDFRFSAKDLISNHLTFQLFHHCTIFPKECLPHGMVVFGMGLLNGAKMSS 608

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWP 338
           S GN   + + +         + A  +R+ ++ +   + +  D+  + ++  +  + ++ 
Sbjct: 609 SKGNVYLLEDAIND-------FGADTVRMFLIGSGEPW-QDFDWRNELVSSTKKQIERFA 660

Query: 339 QTSTS-------KGIIDPAVLSALYN----------DLNTVSAIQALH 369
           QT          +  ID  ++S + N          +  T  A+Q   
Sbjct: 661 QTIRDGLAADGPETDIDRWLVSRMQNHISLVTTAMENFQTRQALQEAF 708



 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 5/100 (5%)

Query: 19  QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYVRNITDID 76
              +     + V  P      H+G+ R  IV DV+ R  R    E    + +      + 
Sbjct: 23  TPSEKKKFYLTVAYPYPSGAMHVGHGRTYIVPDVVARFWRMRGREVLYPMAFHVTGAPVI 82

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
                 AR++  +I +   +  +     + F   T  L  
Sbjct: 83  GISKRIARRDESAIKLYRDLYRVPEDVLETF---TDPLNI 119


>gi|258516438|ref|YP_003192660.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780143|gb|ACV64037.1| leucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 828

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 15/124 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIE------KTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     ++         N+ +  G +  EG KMSKS G
Sbjct: 531 PVDQYIGGVEHAILHLLYARFFAKVFYDLKLISAEEPFENL-LTQGMVLKEGAKMSKSKG 589

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  E++       + + A   RL +L        ++++ Q +  +   L++  +  T
Sbjct: 590 NVVSPEEII-------KRYGADTARLFILFAAPPERDLEWSDQGVEGSYRFLNRVWRLVT 642

Query: 343 SKGI 346
               
Sbjct: 643 PLAA 646


>gi|117924014|ref|YP_864631.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|238685476|sp|A0L5I2|SYR_MAGSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|117607770|gb|ABK43225.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 575

 Score = 46.0 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 16/124 (12%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +  DVL R+L          Y  N   +  +++ R+         
Sbjct: 132 PT--GPMHVGHGRGAVTGDVLARILECAGYAVQREYYLNDAGVQVQVLGRSVMLRYRQLF 189

Query: 93  NDAISIITSKNTQQFVKDTTR----------LACLA--PTHQPRATN--HIPQMIYLIQN 138
            DA+ +        +V D  R          L      P   PR      + Q++  I+ 
Sbjct: 190 GDAVEVAEGCYPGDYVVDIARALKEKDQDKWLEVARAEPDEYPREMLEFAMQQVLTWIKA 249

Query: 139 IILH 142
            +  
Sbjct: 250 DLAR 253


>gi|332183966|gb|AEE26220.1| Leucyl-tRNA synthetase [Francisella cf. novicida 3523]
          Length = 813

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNTVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +     I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKDI 639



 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 47/150 (31%), Gaps = 16/150 (10%)

Query: 13  RKITEFQAI-DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I D +  + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDSFKTIEDKNKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-- 127
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDE 129

Query: 128 --HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +  +  + IQ +   G AY  N+ + +D
Sbjct: 130 GYYKWEQWFFIQ-LYKKGLAYRKNSVVNWD 158


>gi|328773407|gb|EGF83444.1| hypothetical protein BATDEDRAFT_15609 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 1104

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         +K       NG L L   KM+KS GN ++++
Sbjct: 683 PLDLRCSGKDLINNHLTFFLYNHTAIFPKDKWPQAVRVNGHLLLNSEKMAKSTGNSLSLS 742

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           E LE        + A   R A+
Sbjct: 743 ESLE-------KYGADATRFAL 757


>gi|327295849|ref|XP_003232619.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464930|gb|EGD90383.1| leucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 973

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 41/152 (26%), Gaps = 18/152 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  +    +  V +     D      E A  E    P       I
Sbjct: 91  HMGHVRVYTISDVLARFNQMKGYD--VLHPMGW-DAFGLPAENAAIERGIHPEGWTNQNI 147

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI-IF 154
           T+            L               P+     Q     +   G AY+A   +   
Sbjct: 148 TN-----MRNQLKDLGI-RFDWDTEVKTCSPEFYKHTQKLFLMLHEKGLAYQAEAVVNYD 201

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                      +  ++D      R   K  K+
Sbjct: 202 PVDKT----VLANEQVDSNGCSWRSGAKVEKR 229


>gi|300853381|ref|YP_003778365.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433496|gb|ADK13263.1| methionyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 644

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 63/186 (33%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +     ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLVGKDILRF--HTIYWPIMLMALGLPVPKKVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L++       ++ A  +R  +L       I F    L   EI + +              
Sbjct: 312 LVD-------NFGADAVRYYLLR-----EIPFGSDGLFNNEIFIKRINADLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  ++  AL          NDL    A+  +  L   
Sbjct: 360 RTCAMVEKYFDGVVQEPTKKEQIDDELIKLALETPEKVEKNMNDLRIPEALDNIWDLITR 419

Query: 375 STKNHD 380
           S K  D
Sbjct: 420 SNKYID 425


>gi|148978532|ref|ZP_01814984.1| isoleucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145962321|gb|EDK27602.1| isoleucyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 946

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 558 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGNGRKMSKSIG 617

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 618 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 669


>gi|153005579|ref|YP_001379904.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152029152|gb|ABS26920.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 838

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 28/86 (32%), Gaps = 14/86 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+AR   + D L R LR               D+   I   A     E+ +
Sbjct: 44  PYPSGAMHMGHARVYTIGDALARHLRMRGH-----------DVLHPIGFDALGLPAENAA 92

Query: 90  IPINDAISIITSKNTQQFVKDTTRLA 115
           I         T +N   F  +  +L 
Sbjct: 93  IKDGRHPEERTRENIVAFRAEMKKLG 118


>gi|186477336|ref|YP_001858806.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|238691294|sp|B2JGX6|SYL_BURP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|184193795|gb|ACC71760.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 864

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQSMG-LAIDWSREVATCSPDYYKWNQWIFLKMLEKGIAYKKTGTVNWD 159


>gi|90416602|ref|ZP_01224533.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331801|gb|EAS47029.1| isoleucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 940

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 7/125 (5%)

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           E    +   L    D++  G D      ++ +  +   +       +  H   ++  GRK
Sbjct: 548 ESVVNARQELRYPADLYLEGSDQHRGWFQSSLKTAIAINGTAPYKAVLTHGFTVDEHGRK 607

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN I+  +++           A V+RL +    +   +  + + L+ A     + 
Sbjct: 608 MSKSIGNVISPQKVINDMG-------ADVLRLWIASADFSSEMTVSDEILSRAGDSYRRI 660

Query: 338 PQTST 342
             T+ 
Sbjct: 661 RNTAR 665


>gi|320009832|gb|ADW04682.1| methionyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
          Length = 537

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 41/141 (29%), Gaps = 24/141 (17%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN- 93
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A   + +     
Sbjct: 26  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANNVTPQAWC 83

Query: 94  -----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
                +A   +              L   A     R T   H  ++   +Q++      Y
Sbjct: 84  DKLVEEAWKPLWEH-----------LNI-ANDDFIRTTEKRHTDRVQEFVQDLFDKDQIY 131

Query: 147 EA--NNEIIFDTSSIPNYGSF 165
           +                 G  
Sbjct: 132 KGGYEGPYCVGCEEYKLPGDL 152


>gi|228910590|ref|ZP_04074402.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849005|gb|EEM93847.1| Leucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 802

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QDNGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|229032397|ref|ZP_04188367.1| Leucyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228728899|gb|EEL79905.1| Leucyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 802

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 59/171 (34%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   +  A   +L      +A H+  ++ T+++  L    A + ++
Sbjct: 636 QENGELSEKITDAPNKELE-----KAYHQTVKKVTEDYAELRFNTAISQMM 681


>gi|68304941|gb|AAY89952.1| predicted isoleucyl-tRNA synthetase [uncultured bacterium
           BAC13K9BAC]
          Length = 925

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++  G+KMSKS GN I+  ++++ K        A ++RL +
Sbjct: 571 SHAMYSKSPYKNVLTHGFVVDKYGQKMSKSIGNIISPQKIIKDKG-------ADILRLWV 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            MT Y + +  + + +        +   TS 
Sbjct: 624 AMTDYSKEMTISDEIIKRVSESYRRIRNTSK 654


>gi|56708082|ref|YP_169978.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110670553|ref|YP_667110.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|254370567|ref|ZP_04986572.1| leucine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|60390664|sp|Q5NG64|SYL_FRATT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123359478|sp|Q14HL6|SYL_FRAT1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56604574|emb|CAG45623.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           SCHU S4]
 gi|110320886|emb|CAL09006.1| Leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           FSC198]
 gi|151568810|gb|EDN34464.1| leucine-tRNA ligase [Francisella tularensis subsp. tularensis
           FSC033]
 gi|282159282|gb|ADA78673.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           NE061598]
          Length = 813

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNIVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +    +I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKVI 639



 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 52/190 (27%), Gaps = 25/190 (13%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L         R     
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQFDSLGFSFD--WSREITTC 127

Query: 130 P------QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
                  +  + IQ +   G AY  N+ +              +  ++ + +        
Sbjct: 128 DEDYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALV 182

Query: 183 YHKKNPADFI 192
             K+ P  F+
Sbjct: 183 EKKEIPQWFL 192


>gi|160915142|ref|ZP_02077355.1| hypothetical protein EUBDOL_01150 [Eubacterium dolichum DSM 3991]
 gi|158432941|gb|EDP11230.1| hypothetical protein EUBDOL_01150 [Eubacterium dolichum DSM 3991]
          Length = 798

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 51/144 (35%), Gaps = 32/144 (22%)

Query: 258 IEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTH 315
            E    ++ H G  L     KMSKS GN +  ++++        ++ A  +RL  M M  
Sbjct: 556 KEPFKKLF-HQGMILGENNEKMSKSRGNVVNPDDIV-------HAYGADTLRLYEMFMG- 606

Query: 316 YREPID----FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-----------NDL- 359
              P++    ++   +  A   L +  +      ++      AL            +D  
Sbjct: 607 ---PLESAKPWSESGVEGARKWLDRVYRLFIEMDVLSDENDGALDYSFHFTVKKVTDDFE 663

Query: 360 --NTVSAIQALHKLARESTKNHDL 381
             N  +AI  +     ++ K   +
Sbjct: 664 SLNMNTAISQMMIFINDAYKAGKV 687


>gi|29833592|ref|NP_828226.1| hypothetical protein SAV_7050 [Streptomyces avermitilis MA-4680]
 gi|29610716|dbj|BAC74761.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 270

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 10/103 (9%)

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSALYN 357
           +RLA+L      P D     LTEA+  L++W +T               +   + +A  +
Sbjct: 163 VRLALLAHPRSSPADLDSGALTEAQETLARWRKTVALWANHPSKPIPEHVRQELRAAWED 222

Query: 358 DLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHILGIEVCKE 399
           DL+  + +  L +L   +   +      +  +  +LG+E+ +E
Sbjct: 223 DLDLPAVLDVLRRLEGADDVPDGARFESYAYADRLLGLELTRE 265


>gi|45644670|gb|AAS73058.1| predicted leucyl-tRNA synthetase [uncultured marine gamma
           proteobacterium EBAC20E09]
          Length = 735

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 57/178 (32%), Gaps = 47/178 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 443 PVDLYIGGIEHAILHLLYSRFFHKALRDIGLLEGDEPFKRL-LTQGMVLKDGAKMSKSKG 501

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEILLSKWPQ 339
           N +     +E        + A  +RL M+ T    P    ++++   +  A   L K   
Sbjct: 502 NTVDPQSYIE-------KYGADTVRLYMMFT---SPPEQSLEWSESSVEGASRFLKKIWN 551

Query: 340 TSTSKGII------------------DPAVLSALYND------LNTVSAIQALHKLAR 373
               +                       A L  + ND       NT  AI A+ +L  
Sbjct: 552 LVDGRKFEIYDINNNFSKEELNLRRKSHATLKKVENDFEVRFSFNT--AIAAIMELIN 607


>gi|319892709|ref|YP_004149584.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162405|gb|ADV05948.1| Valyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|323464257|gb|ADX76410.1| valyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 876

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 37/213 (17%), Positives = 76/213 (35%), Gaps = 22/213 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ P D   W +   +   W S   W     GW  E +A    +      +   G D+I
Sbjct: 427 GEEAPVDIENWTQDEDVLDTWFSSALWPFSTLGWPNEDAADYQRFYPTN--VLVTGYDII 484

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q       +   ++ +H      +GRKMSKS GN +   ++++        
Sbjct: 485 FFWVARMIFQGLEFTGQKPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-------Q 537

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       P   + ++ +++      ++K W     S   I  +     + 
Sbjct: 538 YGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAARFSLMNIGDSFK---FE 592

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           D+N  S +    +     T+ ++ +      + 
Sbjct: 593 DINLSSDLSVADQWI--LTRLNETIDTVTQLSD 623


>gi|148560370|ref|YP_001258936.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148371627|gb|ABQ61606.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 515

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYTGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|116333862|ref|YP_795389.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116099209|gb|ABJ64358.1| valyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 888

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 61/160 (38%), Gaps = 12/160 (7%)

Query: 186 KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           K P D   W++   +   W S   W     GW  E SA    Y      +   G D+IF 
Sbjct: 440 KAPKDIENWEQDPDVLDTWFSSALWPFSTMGWPDEDSADFKRYFPTSTLV--TGYDIIFF 497

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
                + QS          N+ +H    + EGRKMSKS GN I   E+++        + 
Sbjct: 498 WVSRMMFQSLEFTGKRPFKNVLLHGLIRDEEGRKMSKSLGNGIDPMEVID-------KYG 550

Query: 304 APVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
           A  +R  +       + + F+  ++  A   ++K    S 
Sbjct: 551 ADALRWFLSTGSTAGQDVRFSYTKMDAAWNFINKIWNASR 590


>gi|302677272|ref|XP_003028319.1| hypothetical protein SCHCODRAFT_83252 [Schizophyllum commune H4-8]
 gi|300102007|gb|EFI93416.1| hypothetical protein SCHCODRAFT_83252 [Schizophyllum commune H4-8]
          Length = 1107

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+     DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 698 PFDVRSSAKDLINNHLTFALYNHVAIFDEENWPLSMRCNGHLMLNGAKMSKSKGNFLTLK 757

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +         + A   RL++
Sbjct: 758 DAIS-------KFGADATRLSL 772


>gi|238026215|ref|YP_002910446.1| leucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237875409|gb|ACR27742.1| Leucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 864

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     +    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKRQMQAMG-LAIDWSREIATCNPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|150390081|ref|YP_001320130.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|229559881|sp|A6TQK3|SYL_ALKMQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149949943|gb|ABR48471.1| leucyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 824

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 54/144 (37%), Gaps = 38/144 (26%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN ++  E++       + + A   RL +L        ++++ 
Sbjct: 569 LTQGMVLKDGAKMSKSKGNVVSPEEII-------QKYGADTARLFVLFAAPPERDLEWSD 621

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVL------SAL----------------------Y 356
           Q +  +   L++  +   ++  ID  +        AL                       
Sbjct: 622 QGVEGSYRFLNRVWRL--AEEFIDNNLFMSTSLGEALTKRDKDLKYTIHYTIKKVTSDVE 679

Query: 357 NDLNTVSAIQALHKLARESTKNHD 380
           +  N  +AI A+ +L  E  K  +
Sbjct: 680 DRFNFNTAISAVMELINELYKYKE 703



 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 42/141 (29%), Gaps = 15/141 (10%)

Query: 18  FQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F  I+    + YV    P      H+G+ R   + DV+ R  R       V +       
Sbjct: 23  FSIIERDRPKYYVLEMFPYPSGKIHMGHVRNYSIGDVVARFKRMKGYN--VLHPMGWDSF 80

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
                  A +              T +N ++  +    L  L+       +   P+    
Sbjct: 81  GLPAENAAIKHGIH------PDHWTKENVKEMKEQLDALG-LSYDWDREVSTCTPEYYKW 133

Query: 136 IQ----NIILHGHAYEANNEI 152
            Q         G AY+  +++
Sbjct: 134 TQWLFLQFYHKGLAYKKESQV 154


>gi|325190727|emb|CCA25221.1| isoleucyltRNA synthetase putative [Albugo laibachii Nc14]
          Length = 963

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 53/141 (37%), Gaps = 12/141 (8%)

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W S    G P     C+           D++  G D      ++ +  S    R     
Sbjct: 537 SWYSVLAAGTPSKEPVCA-----------DVYLEGSDQHRGWFQSSLLTSVAVQRQAPYK 585

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR-SWPAPVIRLAMLMTHYREPID 321
           N+  H   L+ +GRK SKS GN +  ++ ++ +   G  ++ A VIR  +  T Y   + 
Sbjct: 586 NLITHGFVLDEQGRKQSKSLGNTVVPSDFIDGRSKQGMPAYGADVIRYWVATTDYTSDVS 645

Query: 322 FTVQRLTEAEILLSKWPQTST 342
                + +    + K   T+ 
Sbjct: 646 IGPGIVQKVSEAVRKVRNTAR 666


>gi|322379416|ref|ZP_08053786.1| isoleucyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148125|gb|EFX42655.1| isoleucyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 941

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 8/121 (6%)

Query: 221 AMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           A+    LG    D+   G D      ++ +  SC          +  H   ++ +G KMS
Sbjct: 569 AVCEERLGVYPSDLVLEGSDQHRGWFQSSLLLSCIKHSKAPFKAVLTHGFTVDAKGHKMS 628

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN  ++ E+L       +++ + ++RL ++M  Y++ +  +     +      K   
Sbjct: 629 KSKGNVFSLEEVL-------KTYGSDILRLWVVMNDYQDNLSVSSAFFKQTSESYKKVRN 681

Query: 340 T 340
           T
Sbjct: 682 T 682


>gi|134301894|ref|YP_001121863.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
 gi|166231609|sp|A4IXU1|SYL_FRATW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134049671|gb|ABO46742.1| leucyl-tRNA synthetase [Francisella tularensis subsp. tularensis
           WY96-3418]
          Length = 813

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNIVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +    +I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKVI 639



 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192


>gi|332703470|ref|ZP_08423558.1| leucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
 gi|332553619|gb|EGJ50663.1| leucyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
          Length = 833

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 42/158 (26%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  A++ +  G +  +G KMSKS GN +   +++         + A   RL +L      
Sbjct: 568 EPFASL-LTQGMVIKDGAKMSKSKGNVVDPGDMIGR-------YGADTTRLFILFAAPPE 619

Query: 318 EPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPAVLSALYND--------- 358
           + ++++ Q +  A   L +  +           S +   +DPA LS    D         
Sbjct: 620 KELEWSDQGVEGASRFLGRLWRLVEELLPDLSASGACADLDPATLSPRTKDLRRKEHETV 679

Query: 359 ------------LNTVSAIQALHKLARESTKNHDLLPI 384
                        NTV  I A+ +L  E     D L  
Sbjct: 680 QRVTRDLEPPFQFNTV--IAAVMELVNELYHAKDELRA 715



 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 45/154 (29%), Gaps = 20/154 (12%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  R       V +              A +           + 
Sbjct: 49  IHMGHVRNYSIGDVVARYKRMRGF--HVLHPMGWDAFGLPAENAAIKHGIH------PAK 100

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYLIQNIILHGHAYE--ANNEI 152
            T  N  +      R+       +  AT        + ++ I  ++  G AY   +    
Sbjct: 101 WTFANIDEMRAQLQRMGYSYDWERELATCTPEYYKWEQLFFIS-MMEKGLAYRRKSPQNW 159

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             D  ++      +  ++++ K          K+
Sbjct: 160 CPDCHTV-----LANEQVEDGKCWRCDAVVEQKE 188


>gi|328676960|gb|AEB27830.1| Leucyl-tRNA synthetase [Francisella cf. novicida Fx1]
          Length = 813

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNIVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +     I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKDI 639



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192


>gi|325980977|ref|YP_004293379.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325530496|gb|ADZ25217.1| leucyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 881

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 16/149 (10%)

Query: 14  KITEFQAID-PSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +I+ F+A++ P   + Y      Y     H+G+ R   + DVL R  R       V    
Sbjct: 20  RISAFKAMEIPGKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMQGFN--VLQPM 77

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                       A Q         + +  T  N     K    L  L+   +   T   P
Sbjct: 78  GWDAFGLPAENAAMQNTV------SPAKWTYDNIAYMRKQLKSLG-LSIDWEREITTCDP 130

Query: 131 QMIYLIQ----NIILHGHAYEANNEIIFD 155
              +  Q     ++  G AY+    + +D
Sbjct: 131 SYYHWNQWLFLRMLEQGLAYQTTGTVNWD 159


>gi|114331428|ref|YP_747650.1| isoleucyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|114308442|gb|ABI59685.1| Isoleucyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 935

 Score = 46.0 bits (108), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 41/107 (38%), Gaps = 12/107 (11%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D     + +  H   ++ +G KMSKS GN I   ++ +T         A ++RL + 
Sbjct: 586 CAIDGYAPYSALLTHGFVVDGQGYKMSKSKGNVIAPQKIADTLG-------ADILRLWVA 638

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSAL 355
            T Y   +  + + L        +   T      +    DP V  AL
Sbjct: 639 STDYSGELSISDEILKRTVETYRRIRNTLRFLLANLADFDP-VTDAL 684



 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 14/136 (10%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERARQE 86
           GP  Y     HIG+A   I+ D++ +       +           +  I+ +I ++  + 
Sbjct: 57  GP-PYANGDIHIGHAVNKILKDIVVKSKTLSGFDAPYIPGWDCHGLP-IEHQIEKKHGKH 114

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP-----RATNHIPQMIYLIQNIIL 141
            P+  +         +   +   D  RL  L     P      AT     +I  +  I  
Sbjct: 115 LPADQVRKLCRAFAQQQVDRQKADFMRLGVLGDWEYPYLTMNYATEA--GIIRALGKIYR 172

Query: 142 HGHAYEANNEIIFDTS 157
           +GH Y+    + +   
Sbjct: 173 NGHLYQGQKPVNWCID 188


>gi|261838697|gb|ACX98463.1| isoleucyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|224438465|ref|ZP_03659389.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313144898|ref|ZP_07807091.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313129929|gb|EFR47546.1| leucyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 826

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 36/87 (41%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +   G KMSKS GN +  N+++         + A   RL +L      
Sbjct: 575 EPFKNL-LTQGMVLKNGAKMSKSKGNVVNPNDIITR-------YGADTARLFILFAAPPM 626

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
             +++    L  A   L +  + +++ 
Sbjct: 627 RELEWNDSALEGAFRFLKRLWERASNA 653


>gi|254372856|ref|ZP_04988345.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570583|gb|EDN36237.1| leucyl-tRNA synthetase [Francisella novicida GA99-3549]
          Length = 813

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNIVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +     I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKDI 639



 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192


>gi|115389942|ref|XP_001212476.1| leucyl-tRNA synthetase [Aspergillus terreus NIH2624]
 gi|114194872|gb|EAU36572.1| leucyl-tRNA synthetase [Aspergillus terreus NIH2624]
          Length = 1128

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KMSKS GNF+T+ 
Sbjct: 718 PLDVRVSGKDLIQNHLTFFLYIHVALFPPEYWPRGVRANGHLLLNGDKMSKSTGNFLTLK 777

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + ++        + A   R+A 
Sbjct: 778 DSVD-------KFGADATRIAF 792


>gi|317051698|ref|YP_004112814.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
 gi|316946782|gb|ADU66258.1| isoleucyl-tRNA synthetase [Desulfurispirillum indicum S5]
          Length = 925

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ +GRKMSKS GN +  + ++       + + A ++RL +
Sbjct: 578 AVATRGQAPYKTVLTHGFVLDGKGRKMSKSMGNVVAPDAII-------KKYGADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YR+ +  + + +        +   T+ 
Sbjct: 631 AAEDYRDDLRISDEIINRLAESYRRIRNTAR 661


>gi|282856467|ref|ZP_06265744.1| isoleucine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585707|gb|EFB90998.1| isoleucine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 30/91 (32%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS  N +    +            A ++RL +
Sbjct: 580 SVAVAGKAPYRAVLTHGFIVDEQGRKMSKSLQNGVAPERITNRDG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               YR  +  +   +        +   T+ 
Sbjct: 633 ASADYRSDVHISDGIIKNLSEEYRRIRNTAR 663


>gi|171778891|ref|ZP_02919953.1| hypothetical protein STRINF_00814 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282537|gb|EDT47961.1| hypothetical protein STRINF_00814 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 833

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 53/148 (35%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVER-------YGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     L A+    NT  AI  L      + K
Sbjct: 662 DRVYRLLTTKEIVAENNGNLDKVYNETVKAVTEQLEAM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
             D L +  A   +  +     HL++ +
Sbjct: 718 -EDKLFVDYAKGFVQLLAPFAPHLSEEL 744


>gi|302803323|ref|XP_002983415.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
 gi|300149100|gb|EFJ15757.1| hypothetical protein SELMODRAFT_445517 [Selaginella moellendorffii]
          Length = 1155

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 47/140 (33%), Gaps = 18/140 (12%)

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W S  G  R  W                D++  G D      ++ +  S     +    
Sbjct: 730 SWASVLGTKR--W--------------PADVYLEGSDQHRGWFQSSLLTSVATRGVAPYR 773

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPI 320
            +  H   L+ +  KMSKS GN +    ++E  K       + A V+RL +    Y   +
Sbjct: 774 QVLTHGFVLDEKNVKMSKSLGNVVDPRSVIEGGKNQKEQPAYGADVLRLWVASVDYTGDV 833

Query: 321 DFTVQRLTEAEILLSKWPQT 340
               Q L +   +  K   T
Sbjct: 834 AIGPQILKQTADVYRKLRGT 853


>gi|254362636|ref|ZP_04978725.1| isoleucine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153094250|gb|EDN75121.1| isoleucine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 938

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKS------DLVQPQEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|317182627|dbj|BAJ60411.1| isoleucyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|313891853|ref|ZP_07825458.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313119847|gb|EFR43034.1| leucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 823

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 56/176 (31%), Gaps = 41/176 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                    E   N+ +  G +  +GRKMSKS G
Sbjct: 530 QVDQYIGGIEHAILHLLYSRFFMKVLYDEGLVRDSEPFKNL-LCQGMVLKDGRKMSKSVG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  E++         + A   RL +L      + ++++ + +  A   L +      
Sbjct: 589 NVVSPEEIVS-------KYGADTARLFILFAAPPEKDLEWSDKGVEGAYRFLKRVWIIVD 641

Query: 343 SKGIIDPAVLSALYND------------------------LNTVSAIQALHKLARE 374
               +       L  +                         NT  AI ++ +L  +
Sbjct: 642 RFINLKTESREELNENEKALRRRLHRSIAKVTSDLNGKFSFNT--AISSIMELVND 695


>gi|261492878|ref|ZP_05989424.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261496772|ref|ZP_05993147.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261307611|gb|EEY08939.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261311419|gb|EEY12576.1| isoleucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 938

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATNGKAPYKQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEITVSHNILNSAGESYRRIRNTARFLLANLNGFDPKS------DLVQPQEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|156523096|ref|NP_001095962.1| leucyl-tRNA synthetase, cytoplasmic [Bos taurus]
 gi|151554911|gb|AAI48057.1| LARS protein [Bos taurus]
 gi|296485204|gb|DAA27319.1| leucyl-tRNA synthetase [Bos taurus]
          Length = 1176

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 55/164 (33%), Gaps = 51/164 (31%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                D+   G DLI  H      N +A      D+          NG L L   KMSKS
Sbjct: 664 FWYPVDLRASGKDLIPNHLSYFLYNHVAMWPEECDKWPVAVRA---NGHLLLNSEKMSKS 720

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+T+++ ++        + A  +RL                 L +A   +       
Sbjct: 721 TGNFLTLSQAVD-------KYSADGMRL----------------ALADAGDTVE------ 751

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                 D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 ------DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|114567117|ref|YP_754271.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|122317896|sp|Q0AWK4|SYL_SYNWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114338052|gb|ABI68900.1| leucyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 824

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 21/135 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    + +  G +  +  KMSKS G
Sbjct: 529 PVDQYIGGVEHAILHLMYARFFTKFLFDINVLSCQEPFTRL-LTQGMVLKDNAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEILLSKWPQ 339
           N ++  E+++T       + A   RL +L      P    ++++ Q +  A   L++  +
Sbjct: 588 NVVSPEEIIDT-------YGADTARLFILFA---SPPERDLEWSEQGVEGAFRFLNRVWR 637

Query: 340 TSTSKGIIDPAVLSA 354
             +        + +A
Sbjct: 638 LVSELAEGIKDLPAA 652


>gi|312879847|ref|ZP_07739647.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
 gi|310783138|gb|EFQ23536.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
          Length = 829

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  EG KMSKS GN +  +E++       R + A   RL +L  +   
Sbjct: 567 EPFTNL-LTQGMVLKEGTKMSKSKGNVVDPDEII-------RRYGADTARLFILFASPPE 618

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
           + +D++ + +  A   L +  +    +
Sbjct: 619 KDLDWSDKGVEGAHRFLGRVHRLVEDR 645



 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 34/124 (27%), Gaps = 13/124 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D+L R LR       V Y              A      +  
Sbjct: 40  PYPSGALHMGHLRNYSIGDLLARFLRMQGYN--VLYPIGFDAFGLPAENAA------LKY 91

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               S  T KN     +   R+ C     + R     P      Q         G AY  
Sbjct: 92  GVQPSEWTWKNIDHMTEQLHRMGCSY-DWRRRVETCNPDYYRWTQWLFLQFFKKGLAYRK 150

Query: 149 NNEI 152
           +  +
Sbjct: 151 HAPV 154


>gi|315229915|ref|YP_004070351.1| leucyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315182943|gb|ADT83128.1| leucyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 958

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 14/163 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    +         +        NG+  LEG+KMSKS GN +   
Sbjct: 595 PLDWRCSAKDLIPNHLTFFVFNHVAIFDKKYWPKGIAVNGYGTLEGKKMSKSKGNVLNFI 654

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +           A V+RL ++    +    D+  + +++ +  L ++ +  +     D
Sbjct: 655 DAINENG-------ADVVRLYIMSLAEHDSDFDWRSKEVSKLKGQLERFYELISEFAEYD 707

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                    D      +  LH++ +        L  F     +
Sbjct: 708 AKPAELKDID----KWM--LHRINKAIEGATKALEEFRTRTAV 744



 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 18 FQA-IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          F+  ID +  + Y+     Y     H+G+AR   + DV+ R  R            +IT
Sbjct: 21 FEPKIDRNKPKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAWHIT 79


>gi|188528187|ref|YP_001910874.1| isoleucyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|254782411|sp|B2UVG2|SYI_HELPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|188144427|gb|ACD48844.1| isoleucyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|147900889|ref|NP_001087393.1| leucyl-tRNA synthetase [Xenopus laevis]
 gi|50925135|gb|AAH79713.1| MGC82093 protein [Xenopus laevis]
          Length = 1178

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A           A     NG L L   KMSKS 
Sbjct: 666 FWYPVDLRVSGKDLVPNHLSYFLYNHVAMWPEDSGKWPVAVR--ANGHLLLNSEKMSKST 723

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T++E +E        + A  +RL                 L +A   +        
Sbjct: 724 GNFLTLSEAVE-------KFSADGMRL----------------ALADAGDTVE------- 753

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 754 -----DANFVEAMAD-----AGILRLYTWVEWVKEMLANCDSL 786


>gi|322371470|ref|ZP_08046019.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549002|gb|EFW90667.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 893

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 15/124 (12%)

Query: 230 VFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H          I+     D  E   N+ +  G + L+G KMSKS G
Sbjct: 531 PVDRYVGGIEHAVMHLLYSRFVTKVISDMDMLDHREPFTNL-VTQGMVLLDGDKMSKSKG 589

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++   ++E        + A   RL  +      +  D+T + +  +   L +      
Sbjct: 590 NVVSPQRIVE-------EYGADTARLFTMQAAQPEKDFDWTEEGVKSSYEFLQRLAGAVE 642

Query: 343 SKGI 346
           S   
Sbjct: 643 SFAE 646


>gi|308183515|ref|YP_003927642.1| isoleucyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065700|gb|ADO07592.1| isoleucyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|297180926|gb|ADI17130.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0070_03O15]
 gi|297181498|gb|ADI17685.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0130_23I23]
          Length = 793

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 21/130 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 505 PVDLYIGGVEHAILHLLYSRFFFKALRDMDIVEGDEPFKKL-LTQGMVLKDGAKMSKSKG 563

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEILLSKWPQ 339
           N +   E +         + A  IR  M+      P    ++++   L      L +   
Sbjct: 564 NTVDPKEYIT-------KYGADSIRTFMIFA---SPPEQSLEWSDNGLEGCHKFLKRLWN 613

Query: 340 TSTSKGIIDP 349
            ST+   +D 
Sbjct: 614 LSTNISELDE 623


>gi|229030283|ref|ZP_04186337.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228731036|gb|EEL81964.1| Lysyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 517

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 74/427 (17%), Positives = 129/427 (30%), Gaps = 74/427 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R +I    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIITTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPI-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
             R +  +ID    +     +  IP   D  +       ++F K               A
Sbjct: 69  RFRKVPKNIDPSFAKYIGMPYCDIPDPYDCHNSYAEHFEKEFEKSLQAFGIEVEFIYQHA 128

Query: 126 -------TNHIPQM------IYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSR--RK 169
                    +I +       IY I      G   E         T      G  +     
Sbjct: 129 EYRSRRYNENIFESLYKRKEIYDILMSFKTGECSEEERESFYPVTLYCEKCGKDATTITH 188

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
            DE     +       +N    +    +  M+  W+  W      W IE           
Sbjct: 189 FDEVLKSVQYECVCGNQNELSVL---NTNKMKLNWKIDWPMR---WMIEDVIFEP----- 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFIT 287
                 GG D         +++    +   + A  ++   F+ ++G   KMS S+GN IT
Sbjct: 238 ------GGRDHSSETGSYNVSKEIAKEIFNREAPHYVAYDFIGIKGHHEKMSSSSGNSIT 291

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK 344
            +ELL       + +   VI        YR    F     + +        +   +  +K
Sbjct: 292 PSELL-------KVYLPEVILFMF--AKYRPNAAFHIGLDEDVIRNYTEYERLKDSYENK 342

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
            + +  +  A+              KL+R  ++  +  P FN  A  L +      + + 
Sbjct: 343 TLKNEDLFEAI--------------KLSRVDSRIKEY-PKFNQVAGTLPLLNFDSSILQG 387

Query: 405 ISIAIEK 411
           I   I++
Sbjct: 388 ILEKIDR 394


>gi|297617013|ref|YP_003702172.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144850|gb|ADI01607.1| isoleucyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 926

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +    ++E          A ++RL +
Sbjct: 574 SVAVTGRAPYRIVLTHGFVVDEQGRKMSKSLGNVVDPLNIIEKMG-------ADILRLWV 626

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR  +  +   + +A     K   T
Sbjct: 627 SSADYRGDVAASENIMNQAAEAYRKIRNT 655


>gi|296394638|ref|YP_003659522.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181785|gb|ADG98691.1| methionyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 514

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 42/130 (32%), Gaps = 11/130 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              H G+A   I  D   R  R     K V +   + +   K+ + A +E        + 
Sbjct: 17  GAPHFGHAYEFISADAFARFARLDG--KDVFFSVGMDEYGQKVQQSAEKE------GISP 68

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
                +  ++F++    L         R T   H   +  L + +  +G  Y+ +    +
Sbjct: 69  QEFVDRVAERFLELHAALGSSY-DRFIRTTEPGHTASVQELWRRMDANGDIYQGSYTGWY 127

Query: 155 DTSSIPNYGS 164
                  YG 
Sbjct: 128 SVRDEAFYGE 137


>gi|323339480|ref|ZP_08079759.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323093094|gb|EFZ35687.1| valine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 887

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 19/178 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ P D   W++ T +   W S   W     GW    S     Y     D    G D+I
Sbjct: 437 GEEAPEDIENWEQDTDVLDTWFSSALWPFSTMGWPDTESEDFKRYF--PTDTLVTGYDII 494

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS          ++ +H    + +GRKMSKS GN I   ++++        
Sbjct: 495 FFWVSRMIFQSLEFTGRRPFKHVLLHGLIRDEQGRKMSKSLGNGIDPMDVID-------K 547

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
           + A  +R  +       + + F+  ++  A   ++K    S         V+  L +D
Sbjct: 548 YGADALRWFLSTGSTPGQDVRFSYTKMDAAWNFINKIWNASR-------FVIMNLDDD 598


>gi|50553903|ref|XP_504360.1| YALI0E24607p [Yarrowia lipolytica]
 gi|49650229|emb|CAG79959.1| YALI0E24607p [Yarrowia lipolytica]
          Length = 1095

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 23/141 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    I                  NG L L   KMSKS GNF+T+ 
Sbjct: 684 PVDIRVSGKDLIPNHLTFFIYCHTAMFPKRVWPKGIRANGHLLLNHEKMSKSTGNFMTLK 743

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQTSTS--- 343
           +++E        + A   R+A+      +     +F       A + L    + +     
Sbjct: 744 QIVE-------KFGADASRIALADAG--DTFEDANFDEANANAAILRLYTLKEWAEEMVK 794

Query: 344 --------KGIIDPAVLSALY 356
                      +D    + + 
Sbjct: 795 DTSLRTDGNNFLDQTFENEMN 815


>gi|322375009|ref|ZP_08049523.1| leucine--tRNA ligase [Streptococcus sp. C300]
 gi|321280509|gb|EFX57548.1| leucine--tRNA ligase [Streptococcus sp. C300]
          Length = 833

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 71/217 (32%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 778 QIKGKVRSKLMVAKDLS-----REELQE--IALADEK 807


>gi|195977313|ref|YP_002122557.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|238689784|sp|B4U0A1|SYL_STREM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|195974018|gb|ACG61544.1| Leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 833

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  A   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGARKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K       G +D A           +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKEIVAENSGALDKAYHETVKAVTEQIEGM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
             +L   +      L +     HL + +
Sbjct: 718 EDELYVAYAKGFVQL-LAPFAPHLGEEL 744


>gi|21227798|ref|NP_633720.1| lysyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|20906206|gb|AAM31392.1| Lysyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 540

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 20/124 (16%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE------RARQ 85
           G T     HIGN R ++  D  YR L     +    Y   I D  D + +       +  
Sbjct: 30  GITPSGHIHIGNMREVVTADAAYRALLDRGADARFIY---IADNFDPLRKVYPFLPESYA 86

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLACLA----PTHQPRATNHIPQMI-Y 134
           EH   PI++        +  +    + F++   RL             RA  +   +   
Sbjct: 87  EHVGKPISEVPCPCGECANYSEHFLKPFLEALRRLGINPEVYRADEMYRAGMYTEAIKTA 146

Query: 135 LIQN 138
           L++ 
Sbjct: 147 LVKR 150


>gi|24418702|sp|Q8PWA0|SYK1_METMA RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
           ligase 1; Short=LysRS 1
          Length = 537

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 42/124 (33%), Gaps = 20/124 (16%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE------RARQ 85
           G T     HIGN R ++  D  YR L     +    Y   I D  D + +       +  
Sbjct: 27  GITPSGHIHIGNMREVVTADAAYRALLDRGADARFIY---IADNFDPLRKVYPFLPESYA 83

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLACLA----PTHQPRATNHIPQMI-Y 134
           EH   PI++        +  +    + F++   RL             RA  +   +   
Sbjct: 84  EHVGKPISEVPCPCGECANYSEHFLKPFLEALRRLGINPEVYRADEMYRAGMYTEAIKTA 143

Query: 135 LIQN 138
           L++ 
Sbjct: 144 LVKR 147


>gi|310816228|ref|YP_003964192.1| isoleucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308754963|gb|ADO42892.1| isoleucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 969

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 35/108 (32%), Gaps = 12/108 (11%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q           N+  H   L+ +G KMSKS GN I    +++        + A ++RL 
Sbjct: 622 QGSATIGRAPYKNVVTHGFTLDEKGMKMSKSLGNTIVPQAVID-------QYGADILRLW 674

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLS 353
           +    Y        + L        +   T         G  D   ++
Sbjct: 675 VAQADYMSDQRIGPEILKGTADSYRRLRNTMRYILGALDGYTDAEAVA 722


>gi|290968697|ref|ZP_06560235.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
 gi|290781350|gb|EFD93940.1| isoleucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ EGRKMSKS GN +   E++E        + A V+RL +
Sbjct: 579 SVATNGYAPYKAVLTHGFTVDGEGRKMSKSVGNTVAPQEVIE-------KYGADVMRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
               Y+  I  + + L +   +  K   T      S    DPA  S  Y       A+  
Sbjct: 632 SSADYQGDIRLSPKILKQLSDVYRKIRNTFRYLLGSLADFDPAKDSVPY------EALTE 685

Query: 368 LHKLA 372
           L K A
Sbjct: 686 LDKWA 690


>gi|261867173|ref|YP_003255095.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412505|gb|ACX81876.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 862

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 56/154 (36%), Gaps = 43/154 (27%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND---- 358
              +  A+  L++          + +K  ++P VLSA               + +D    
Sbjct: 660 ESGVEGAKRFLARLWNLVFEYNKNPAKTPLNPTVLSAAQKALRRDVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
              NT  AI A+ +L  + T+         A   
Sbjct: 720 QTFNT--AIAAIMELMNKLTRAPLDDEQDRAMMA 751


>gi|220904688|ref|YP_002480000.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219868987|gb|ACL49322.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 670

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 43/129 (33%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D + R   +    +   ++    +  DKI++ A +E        
Sbjct: 13  VNARPHLGHAYTTVVADAMARY--HKLAGQDTLFLTGTDEHGDKIVQAAEKE------GK 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--N 150
           +        + +F     RL   A     R T+  H+  +   +Q +   G  Y      
Sbjct: 65  SPKEFVDGISARFQALWPRLDV-ANDRFVRTTDPAHVASVQSFLQKVYDAGDIYFGEFGG 123

Query: 151 EIIFDTSSI 159
              +     
Sbjct: 124 HYCYGCERF 132



 Score = 43.3 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 40/178 (22%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H    D++ PH          A  + +  ++ +H  +L +   KMSKS GN +   E+  
Sbjct: 254 HLVAKDILKPHAVFWPTMLKSA-GLPQYRHLNVHGYWL-VRDTKMSKSLGNVVEPEEM-- 309

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------------------TEAE 331
                 + + A   R  +L   H+     F+ + L                       A+
Sbjct: 310 -----AQRFGADAFRYFLLREMHFGSDASFSDEALVGRINADLANDLGNLFSRVLSMTAK 364

Query: 332 ILLSKWP---QTSTSKGIIDPAVLSALYN------DLNTVSAIQALHKLARESTKNHD 380
              S+ P   Q   +   I+    +A+ N      ++     +++L +L R   K  D
Sbjct: 365 YFGSRVPAPKQFDEADKAIEDLCATAMRNFSQLFGNVQFAQGLESLWELVRALNKYVD 422


>gi|126465030|ref|YP_001040139.1| leucyl-tRNA synthetase [Staphylothermus marinus F1]
 gi|189083155|sp|A3DKS1|SYL_STAMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126013853|gb|ABN69231.1| leucyl-tRNA synthetase [Staphylothermus marinus F1]
          Length = 969

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 8/100 (8%)

Query: 14  KITEFQA-IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F+  I+P   + ++  P  Y     HIG+ R   + D++ R  R            
Sbjct: 23  EKKIFEPRIEPDKPKYFITVPYPYTNAPLHIGHGRTYTIGDIIARYKRLRGYNVLFPMAF 82

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
           +IT     II  + +                    ++VKD
Sbjct: 83  HIT--GTPIIAISERISRGEEEIINRY---KSYIAKYVKD 117



 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 8/110 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G+  I  H    I         +    +   N  +  EG KMSKS GN I + ++ E  
Sbjct: 608 TGIAHISNHLSFFIYHHIAIFPRKHWPKMITLNEMVIREGTKMSKSKGNVILLRDIAE-- 665

Query: 296 KFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                 + A + RL +    +    +D+  + +      L K+   +   
Sbjct: 666 -----KYSADLFRLYIAGAANLDTVLDWREKEVERVIDSLKKFTAIAEKA 710


>gi|56751678|ref|YP_172379.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81301246|ref|YP_401454.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|81820600|sp|Q5N1G1|SYI_SYNP6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56686637|dbj|BAD79859.1| isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81170127|gb|ABB58467.1| Isoleucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 954

 Score = 46.0 bits (108), Expect = 0.013,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++   K   +   + A V+RL
Sbjct: 580 SVACNGHAPYRRVLTHGFALDEKGRKMSKSLGNVVDPAIVINGGKDQKQEPPYGADVLRL 639

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   T+ 
Sbjct: 640 WVSSVDYSSDVPIGKNILKQMADVYRKIRNTAR 672


>gi|308064176|gb|ADO06063.1| isoleucyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+          + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKMHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|307266467|ref|ZP_07548002.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306918508|gb|EFN48747.1| isoleucyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ EGRKMSKS GN I   +++       + + A ++RL  
Sbjct: 575 SVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVI-------KEYGADILRLWT 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +   +  + + L +      K   TS 
Sbjct: 628 VSADFTSDMRISQEILKQMTEAYRKIRNTSK 658


>gi|221054251|ref|XP_002261873.1| methionine--trna ligase [Plasmodium knowlesi strain H]
 gi|193808333|emb|CAQ39036.1| methionine--trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 885

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 59/330 (17%), Positives = 104/330 (31%), Gaps = 78/330 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A  +++ D + R  +        T     T  D+  ++ A Q   +   N 
Sbjct: 231 VNGDPHIGHAYEIVLADAIARYHKNIGRRVFFT-----TGADEHGMKIANQAARN---NL 282

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANN 150
               +  +N  +F +    L      +  R T    +   + Q I      +   Y    
Sbjct: 283 TPQELCDQNVLKFKELNKLLHVDE-DYYVRTT--CDKHKKIAQEIWTKCEQNEDIYLGEY 339

Query: 151 EIIFDTS----------SIPNYGS-FSRRKIDEQKMGT--------------RVPEKYHK 185
           E  ++             + NY    +  K+++ K  +               + E  H 
Sbjct: 340 EGWYNVREETYVPENEAKLMNYRDPLNNIKLEKMKESSYFFKMSKYQERLINYIHENPHF 399

Query: 186 KNPADFILWKRS----TPMEP-------GWESPWGRGRPG--------W-------HIEC 219
             P      KR+       EP         +  WG   P         W       +  C
Sbjct: 400 IQPEQ----KRNEILQRLKEPLADLSCSRTKFSWGIPVPSDNKHVMYVWMDALINYYSSC 455

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
             M         D+H  G D+++ H     +     +      +++ H   L  +G+KMS
Sbjct: 456 FIMDGKEDYWPADVHLIGKDIVWFHTVIFPSILMSVNVDLP-KSVFCHGFVLAGDGKKMS 514

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRL 309
           KS GN I   E++ET       + +   R 
Sbjct: 515 KSLGNVINPFEIIET-------YGSDAFRF 537


>gi|148887442|sp|Q4A5K5|SYI_MYCS5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144575172|gb|AAZ43966.2| Ile-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 897

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD++  G D       + +  +     +    N+  H   L+ +G+KMSKS  N +   
Sbjct: 547 PFDVYLEGNDQFRGWFNSSVINAVAYAGVSPYINLVSHGFALDGQGKKMSKSRNNVVDPL 606

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +++       + + A ++RL +  + Y   +  +   L +   +  K   T
Sbjct: 607 DVI-------KKYGADILRLWVANSEYSSDVHISESILVQNSEIYRKIRNT 650


>gi|326389978|ref|ZP_08211541.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|325994038|gb|EGD52467.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ EGRKMSKS GN I   +++       + + A ++RL  
Sbjct: 575 SVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVI-------KEYGADILRLWT 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +   +  + + L +      K   TS 
Sbjct: 628 VSADFTSDMRISQEILKQMTEAYRKIRNTSK 658


>gi|308062684|gb|ADO04572.1| isoleucyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|303255050|ref|ZP_07341126.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597880|gb|EFL64950.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 833

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  RK+L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSRKELQE--IALADEK 807


>gi|300709425|ref|YP_003735239.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
 gi|299123108|gb|ADJ13447.1| isoleucyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
          Length = 1069

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 72/175 (41%), Gaps = 24/175 (13%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H    + EG+KMSKS GN +  +E ++          +  +RL +L 
Sbjct: 590 AALGEVPYDEVLMHGFANDSEGKKMSKSVGNVVQPHEAIQRHG-------SDAMRLFLLS 642

Query: 314 THYR-EPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAV--LSALYNDLNTVSA 364
            + + E + F+   +   E  L+      ++P         DP    L A+ +DL  V  
Sbjct: 643 VNPQGEDMRFSWDEMATMERNLNILWNVFRFPLPYMRMDGFDPEETDLDAVDSDLELVDE 702

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             +  L  + RE T   D      A + ++      E + +++S    ++V+ER+
Sbjct: 703 WILARLQTVTREMTAAWDEFRQDQALSALM------EFVVEDVSRFYIQVVRERM 751


>gi|294782393|ref|ZP_06747719.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294481034|gb|EFG28809.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 637

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 74/462 (16%), Positives = 134/462 (29%), Gaps = 126/462 (27%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +         +V  + +   K+ + A Q         
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMG--MDTHFVTGLDEHGQKVEQAAEQNGF------ 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K T  F      L         R T   H   +  +++ +   G  Y+   E 
Sbjct: 66  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEERHKKAVKKILEIVHEKGDIYKGEYEG 124

Query: 153 IFDTS--------------SIPNYGS-FSRRKID----EQKMGTRVPEKYHKKNPADFIL 193
            +  S                P+ G   +  K +    +         K+  ++P DFIL
Sbjct: 125 KYCVSCETFFPENQLNGSNKCPDCGKELTVLKEESYFFKMSKYADALLKHIDEHP-DFIL 183

Query: 194 WKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLG 228
                     +            + +  G P      HI            ++       
Sbjct: 184 PHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAGFENDD 243

Query: 229 KVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
           K FD        +H  G D+I  H         C       K  +  + +G+   EG KM
Sbjct: 244 KKFDKFWNDARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFT-------------- 323
           SKS GN +             + +     R  +L   ++    D++              
Sbjct: 300 SKSKGNVV-------DPYNEIKKYGVDAFRYYLLREANFGTDGDYSTKGIVGRLNSDLAN 352

Query: 324 ------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND-----------LNTVSAIQ 366
                  + L   +   +     S++   ID  V+ A++++                A++
Sbjct: 353 DLGNLLNRTLGMYKKYFNGIVVASSASEEIDD-VIKAMFDETIKDVEKYMYLFEFSRALE 411

Query: 367 ALHK----------------LARESTKNHDLLPIFNASAHIL 392
            + +                LA++ TK   L  + N  +  L
Sbjct: 412 TIWRFISRLNKYIDETMPWALAKDETKKARLAAVMNILSEGL 453


>gi|270292031|ref|ZP_06198246.1| leucine--tRNA ligase [Streptococcus sp. M143]
 gi|270279559|gb|EFA25401.1| leucine--tRNA ligase [Streptococcus sp. M143]
          Length = 833

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 72/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D             + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIAAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|217034563|ref|ZP_03439972.1| hypothetical protein HP9810_874g20 [Helicobacter pylori 98-10]
 gi|216942983|gb|EEC22466.1| hypothetical protein HP9810_874g20 [Helicobacter pylori 98-10]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|257061171|ref|YP_003139059.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|256591337|gb|ACV02224.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 959

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 2/125 (1%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A     L    DI+  G D      ++ +  S   + I     +  H   L+ +G KMS
Sbjct: 553 VAKQREELKYPVDIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGHKMS 612

Query: 280 KSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +    ++   K   +   + A V+RL +    Y   +      L +   +  K 
Sbjct: 613 KSLGNIVDPLVIINGGKNQKQEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLSDVYRKI 672

Query: 338 PQTST 342
             T+ 
Sbjct: 673 RNTAR 677


>gi|195378831|ref|XP_002048185.1| GJ13824 [Drosophila virilis]
 gi|194155343|gb|EDW70527.1| GJ13824 [Drosophila virilis]
          Length = 946

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 10/109 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +   V+R  
Sbjct: 605 MSIAARNCAPYRALFVHGFTVDEKGHKMSKSLGNVISPKQI-------TKKYGTDVLRWW 657

Query: 311 ML--MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           +    T +   I  + + L ++   LSK   T      +       L +
Sbjct: 658 VAFHGTQHMS-ITVSDKLLQQSAENLSKVRGTLRYLNGVINQKEHKLSD 705


>gi|218247493|ref|YP_002372864.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|254782387|sp|B7K5H5|SYI_CYAP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218167971|gb|ACK66708.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
          Length = 959

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 2/125 (1%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A     L    DI+  G D      ++ +  S   + I     +  H   L+ +G KMS
Sbjct: 553 VAKQREELKYPVDIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGHKMS 612

Query: 280 KSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +    ++   K   +   + A V+RL +    Y   +      L +   +  K 
Sbjct: 613 KSLGNIVDPLVIINGGKNQKQEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLSDVYRKI 672

Query: 338 PQTST 342
             T+ 
Sbjct: 673 RNTAR 677


>gi|167037288|ref|YP_001664866.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|167040517|ref|YP_001663502.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300914564|ref|ZP_07131880.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307724200|ref|YP_003903951.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|320115704|ref|YP_004185863.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|254782449|sp|B0K8R7|SYI_THEP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782450|sp|B0K2W1|SYI_THEPX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166854757|gb|ABY93166.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|166856122|gb|ABY94530.1| isoleucyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|300889499|gb|EFK84645.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307581261|gb|ADN54660.1| isoleucyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|319928795|gb|ADV79480.1| isoleucyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ EGRKMSKS GN I   +++       + + A ++RL  
Sbjct: 575 SVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVI-------KEYGADILRLWT 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +   +  + + L +      K   TS 
Sbjct: 628 VSADFTSDMRISQEILKQMTEAYRKIRNTSK 658


>gi|283850760|ref|ZP_06368047.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574003|gb|EFC21976.1| arginyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 552

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 119/385 (30%), Gaps = 68/385 (17%)

Query: 12  ERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
            +   EF + +P+       GP      HIG+ R   V D L R+LR         Y  N
Sbjct: 116 TKIQVEFVSANPT-------GP-----LHIGHGRGAAVGDCLARVLRAAGFTVETEYYIN 163

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT------------RLACLAP 119
                 +I+  +        + + ++         +VKD               L+  A 
Sbjct: 164 DAGRQMRILGLSILYRYRELLGEPVTEPEDYYRGDYVKDLAGQLIDREGRGLLALSEEAA 223

Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           T   R      +++  I+  +     +  ++++ F  S +   G+   R  D+ +     
Sbjct: 224 TDACRLHGE-KEILAGIRKDLQD---FRVHHDVWFPESKLLAAGAV-ERTFDDLRAKNLA 278

Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFDIHGG- 236
            +K           W  +T      +       G   +     A       + FD+    
Sbjct: 279 YDKDG-------AFWFATTTFGDDKDRVLVKSGGELTYFASDIAYHDDKFHRGFDVVVDI 331

Query: 237 -GLDLIFPHHENEIAQSC-CADRIEKTAN-----IWIHNGFLNLEGRKMSKSNGNFITIN 289
            G D    H      ++C  A   +  A+     + + N     E   MS   G F T+ 
Sbjct: 332 WGADH---HGYVPRMKACVAALGRDPEASLKVILVQLVNLLKGGEQIAMSTRAGKFETLA 388

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE------------AEILLSKW 337
           +++           A   R   L       +DF +  +T+            A   +   
Sbjct: 389 DVVAEVG-------ADAARFMFLSRKSDSHLDFDLDAVTKKSMDNPVYYVQYAHARVRSV 441

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTV 362
              +  +G++  A   AL   L+T 
Sbjct: 442 FAKAAERGLVPDAASPALLARLDTA 466


>gi|256751721|ref|ZP_05492595.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749390|gb|EEU62420.1| isoleucyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ EGRKMSKS GN I   +++       + + A ++RL  
Sbjct: 575 SVATRGKAPYRNVLTHGFVVDGEGRKMSKSLGNGIDPADVI-------KEYGADILRLWT 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +   +  + + L +      K   TS 
Sbjct: 628 VSADFTSDMRISQEILKQMTEAYRKIRNTSK 658


>gi|217967311|ref|YP_002352817.1| lysyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
 gi|217336410|gb|ACK42203.1| lysyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
          Length = 524

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 16/125 (12%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD--------IDDKIIERA 83
           G T     H+GN R ++  D LYR L+    E    Y+ +  D        + D   E  
Sbjct: 29  GITPSGPIHLGNLREILTGDALYRALQDKGSEVEFIYIADTFDPLRKVYPFLPDSYAEHV 88

Query: 84  RQEHPSIPINDAISI-ITSKNTQQFVKDTTRLACLAPTHQPRATNH-----IPQMIYLIQ 137
            +    IP  +           + F++    L         +A          ++I L  
Sbjct: 89  GKPISEIPDPEGCHENYAEHFLEPFLEAIKILGIEP--KVIKAHESYKNGLYTEIIDLTL 146

Query: 138 NIILH 142
                
Sbjct: 147 QNNEK 151


>gi|254374282|ref|ZP_04989764.1| leucyl-tRNA synthetase [Francisella novicida GA99-3548]
 gi|151572002|gb|EDN37656.1| leucyl-tRNA synthetase [Francisella novicida GA99-3548]
          Length = 813

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNIVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +     I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKDI 639



 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192


>gi|114327130|ref|YP_744287.1| isoleucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315304|gb|ABI61364.1| isoleucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 981

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   L+ +GRKMSKS GN     E+++        + A ++RL ++ +  
Sbjct: 630 GSAPFEAVLTHGFVLDEQGRKMSKSLGNVTAPQEVID-------QYGADILRLWVMSSDT 682

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+ +    + L +   L  +   T
Sbjct: 683 RDDLRIGKEILKQQGELYRRLRNT 706


>gi|71082864|ref|YP_265583.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91762713|ref|ZP_01264678.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|84029526|sp|Q4FPA9|SYI_PELUB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71061977|gb|AAZ20980.1| Isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|91718515|gb|EAS85165.1| isoleucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 905

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 14/108 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC         +I  H   ++ +G KMSKS GN I   ++L       + + A ++R+ +
Sbjct: 579 SCGTRGRAPYESILSHGFVVDGKGLKMSKSVGNVIAPEDIL-------KKYGADILRIWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL 359
             ++Y E +      L +      K   T          +L  L +D 
Sbjct: 632 ASSNYAEDLRIDYSILEQHADSYRKIRNTFRY-------LLGNLNDDF 672


>gi|154291650|ref|XP_001546406.1| hypothetical protein BC1G_15093 [Botryotinia fuckeliana B05.10]
 gi|150846674|gb|EDN21867.1| hypothetical protein BC1G_15093 [Botryotinia fuckeliana B05.10]
          Length = 1124

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 46/146 (31%), Gaps = 31/146 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         +        NG L L G KMSKS GNF+T+ 
Sbjct: 705 PLDLRVSGKDLIPNHLTFFLYIHIAIFPPDYWPKGVRANGHLLLNGEKMSKSTGNFMTLF 764

Query: 290 ELL-------------------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           +++                       F        V+RL  L        ++    + + 
Sbjct: 765 DMINKYGADASRIALADAGDGVADANFEEDVADNNVLRLYTLR-------EWCEDMVKDQ 817

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALY 356
           + L     +T      +D    + + 
Sbjct: 818 DNL-----RTGEKNDFLDALFENEMN 838


>gi|71894569|ref|YP_278677.1| isoleucyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 895

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD++  G D       + +  +     +    N+  H   L+ +G+KMSKS  N +   
Sbjct: 545 PFDVYLEGNDQFRGWFNSSVINAVAYAGVSPYINLVSHGFALDGQGKKMSKSRNNVVDPL 604

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +++       + + A ++RL +  + Y   +  +   L +   +  K   T
Sbjct: 605 DVI-------KKYGADILRLWVANSEYSSDVHISESILVQNSEIYRKIRNT 648


>gi|313888048|ref|ZP_07821726.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312846003|gb|EFR33386.1| isoleucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 1033

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 19/154 (12%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IA S          N+ +++  L+ EG+KMSKS GN +   EL +        + A V+R
Sbjct: 564 IAISTYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVAPFELFD-------KYGADVVR 616

Query: 309 LAML--MTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDL 359
             +L     +  P  F    L E E    +       +     +   IDP  +   Y+DL
Sbjct: 617 WYLLYVSPPW-TPTKFDEDGLREIESKFFRSLRNTYNFFSLYANTDKIDPREVKVSYDDL 675

Query: 360 NTVSA--IQALHKLARESTKNHDLLPIFNASAHI 391
             +    +   H+L +   ++ +   +      I
Sbjct: 676 EEIDKWLLSKYHRLVKNVREDMEAFELTKVVREI 709


>gi|295111687|emb|CBL28437.1| methionyl-tRNA synthetase [Synergistetes bacterium SGP1]
          Length = 650

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D + R  R    +     VR +T  D+      + +  +     
Sbjct: 18  VNDVPHIGHAYTTIACDAMSRYKRMKGCD-----VRFLTGTDEH---GQKVQAAAEKRGV 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A   +  +    F +    L         R T   H+  +  + + ++  G  Y+   E 
Sbjct: 70  APQDLVDRIHLNFKELWRVLNVSNDDF-IRTTEPRHVRVVQDMFKRLMDQGDIYKGEYEG 128

Query: 153 IFDT 156
            +  
Sbjct: 129 KYCV 132


>gi|225869700|ref|YP_002745647.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|254782514|sp|C0M8N3|SYL_STRE4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225699104|emb|CAW92273.1| leucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 833

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 52/148 (35%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  A   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGARKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K       G +D A           +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKEIVAENSGALDKAYHETVKAVTEQIEGM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
             +L   +      L +     HL + +
Sbjct: 718 EDELYVAYAKGFVQL-LAPFAPHLGEEL 744


>gi|167630718|ref|YP_001681217.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687869|sp|B0TBJ3|SYL_HELMI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167593458|gb|ABZ85206.1| leucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 846

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 15/113 (13%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIE------KTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H       +     ++         N+ +  G + + G KMSKS GN 
Sbjct: 536 DQYIGGVEHAILHLMYARFFTKVLYDLKLVKVEEPFENL-LTQGMVLMGGSKMSKSKGNT 594

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           ++  E++         + A   RL +L        ++++ + +  A   L + 
Sbjct: 595 VSPEEIIA-------KYGADTARLFILFAAPPERDLEWSDRGVEGAHRFLHRL 640


>gi|325841283|ref|ZP_08167384.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325489964|gb|EGC92311.1| leucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 811

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 14/137 (10%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 564 KEPFQRLFNQGMILGENNEKMSKSKGNVVNPDDIVESHG-------ADTLRLYEMFMGPL 616

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++ + L  +   L + W    T +  +   V++     L+     +  ++  ++ 
Sbjct: 617 DAAIAWSTEGLDGSRRFLDRVWRLFVTPEHTLAEKVVAENDGKLD-----KVYNETVKKV 671

Query: 376 TKNHDLLPIFNASAHIL 392
           T++++ L    A A ++
Sbjct: 672 TEDYEKLSFNTAIAQMM 688


>gi|313235831|emb|CBY19815.1| unnamed protein product [Oikopleura dioica]
          Length = 479

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D+   H     A    A+       +++H G    +G KMSKS  NF+T  ELLE   
Sbjct: 283 GIDIARFHCIFWPAMLLAAELPLP-KKVFVH-GHWTRDGMKMSKSLDNFVTPKELLELVG 340

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
                  +  +R   L     + +DF  + L 
Sbjct: 341 N-----QSDAVRWFCLKHATLKNVDFQDELLR 367


>gi|331222018|ref|XP_003323683.1| leucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309302673|gb|EFP79264.1| leucyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 1099

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L G+KMSKS GN +T+ 
Sbjct: 674 PMDVRSSGKDLISNHLCFCIYVHTALFDEQFWPRTMRANGHLMLNGKKMSKSTGNSLTLC 733

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + L       + + A   RL +
Sbjct: 734 DSL-------KKFGADATRLTL 748


>gi|257899128|ref|ZP_05678781.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837040|gb|EEV62114.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 930

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 563 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 615

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 616 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 675

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 676 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 729


>gi|257897130|ref|ZP_05676783.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257833695|gb|EEV60116.1| isoleucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 930

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 563 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 615

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 616 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 675

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 676 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 729


>gi|257888495|ref|ZP_05668148.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257824549|gb|EEV51481.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
          Length = 930

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 563 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 615

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 616 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 675

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 676 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 729


>gi|206895183|ref|YP_002246881.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
 gi|206737800|gb|ACI16878.1| valyl-tRNA synthetase [Coprothermobacter proteolyticus DSM 5265]
          Length = 866

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 46/111 (41%), Gaps = 13/111 (11%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D++F      I  +           +++H   L+  G+KMSKS GN +   ++++  
Sbjct: 484 TGYDILFFWVARMIFMATTLTGQIPFEEVFLHGLVLDEHGQKMSKSKGNTVDPMDMID-- 541

Query: 296 KFGGRSWPAPVIRLAMLMTHYRE----PIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R A++           ++F+  R+   + L +K   ++ 
Sbjct: 542 -----EYSADALRYALVSA--MSLGGQDVNFSESRVEHGKNLTNKIWNSAR 585


>gi|104773811|ref|YP_618791.1| valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
 gi|103422892|emb|CAI97554.1| Valyl-tRNA synthetase [Lactobacillus delbrueckii subsp. bulgaricus
           ATCC 11842]
          Length = 879

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+IF      I QS          N+ +H    + 
Sbjct: 460 GWPDEDSADFKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFIGERPFDNVVLHGLIRDE 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   ++++        + A  +R  +L  T   +   F+  ++  A  
Sbjct: 518 QGRKMSKSLGNGIDPMDVID-------KYGADALRWFLLNGTAPGQDTRFSYTKMDAAWN 570

Query: 333 LLSKWPQTST 342
            ++K    S 
Sbjct: 571 FINKLWNASR 580


>gi|74317875|ref|YP_315615.1| isoleucyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|84029576|sp|Q3SHS3|SYI_THIDA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|74057370|gb|AAZ97810.1| isoleucyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
           ATCC 25259]
          Length = 929

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    D++  G D      ++ +   C  D       +  H   ++ +G KM
Sbjct: 551 CVLKRRSELAHPADLYLEGSDQHRGWFQSSLLTGCATDGRAPYDALLTHGFVVDGKGHKM 610

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   ++++        + A ++RL +  T Y   +  + + L        +  
Sbjct: 611 SKSKGNVIAPQKVMD-------QYGADILRLWVATTDYSGELSISDEILKRVVEGYRRIR 663

Query: 339 QT 340
            T
Sbjct: 664 NT 665


>gi|227550467|ref|ZP_03980516.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180368|gb|EEI61340.1| isoleucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 565 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 618 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 677

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|160872646|ref|ZP_02062778.1| leucyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121445|gb|EDP46783.1| leucyl-tRNA synthetase [Rickettsiella grylli]
          Length = 834

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
           +  E    + +  G +   G KMSKS GN I   +L+         + A  +RL +L   
Sbjct: 556 NSNEPFTRL-LTQGMVLKNGVKMSKSKGNTIDPTQLIS-------HYGADTLRLFILFAA 607

Query: 315 HYREPIDFTVQRLTEAEILLSKW 337
              + ++++   +  A   L + 
Sbjct: 608 PPDQSLEWSDTGVEGAYRFLKRL 630



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 48/146 (32%), Gaps = 23/146 (15%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
             +F  +      M+   P      H+G+ R  ++ DV+ R  R           +N+  
Sbjct: 32  KEKFYCL-----SMF---PYPSGHLHVGHVRNYVLGDVIARYQRMLG--------KNVLH 75

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP---- 130
                      E+ +I    + +  T  N     K   +L  L+       T   P    
Sbjct: 76  PIGWDAFGLPAENAAIEKKISPAKWTYSNISHMRKQFKQLG-LSFDWSREITTCNPDYYR 134

Query: 131 -QMIYLIQNIILHGHAYEANNEIIFD 155
            +  + IQ +   G  Y+ N  + +D
Sbjct: 135 WEQWFFIQ-LYKKGLVYKKNASVNWD 159


>gi|119512537|ref|ZP_01631615.1| hypothetical protein N9414_10842 [Nodularia spumigena CCY9414]
 gi|119462798|gb|EAW43757.1| hypothetical protein N9414_10842 [Nodularia spumigena CCY9414]
          Length = 60

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 5/44 (11%)

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
           Q+R    K + F+++D IR QL+  G  L D  +       TRW
Sbjct: 20  QQRPKTGKAENFAASDRIRDQLQELGTTLIDQSDGT-----TRW 58


>gi|146295253|ref|YP_001179024.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145408829|gb|ABP65833.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 655

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 71/346 (20%), Positives = 110/346 (31%), Gaps = 80/346 (23%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y+  P  Y  D  HIG+    +  D L R  R    +    +    TD   + IER
Sbjct: 3   KPKFYITTPIYYPSDKLHIGHTYCTVAADTLARYKRLQGYD---VFFLTGTDEHGQKIER 59

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
             QE    P      I+ S      +KD  +L  ++     R T   H   +  +   + 
Sbjct: 60  KAQEVGKTPQKYVDEIVAS------IKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLY 113

Query: 141 LHGHAYEANNEIIFDTS-------------SIPNYGSFSRRKIDE-----QKMGTRVPEK 182
             G  Y++  E  + T                P+ G    R  +E              K
Sbjct: 114 EQGDIYKSEYEGWYCTPCESFWLDRQLVDGKCPDCGRPVERAREESYFFRLSKYQDALVK 173

Query: 183 YHKKNPADFILWKRSTPME-------PGWE--------SPWGRGRP-------------- 213
           Y +++P DFI+  +S   E       PG E          WG   P              
Sbjct: 174 YIEEHP-DFIV-PQSRANEMINNFIKPGLEDVCVSRTTLKWGIPVPFDPKHVIYVWIDAL 231

Query: 214 -------GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
                  G+  E  +    Y     D+H  G +++  H     A             +  
Sbjct: 232 SNYITALGYMSEDDSKFKKYWPA--DVHLVGKEIVRFHTIIWPAMLMAL--GLPLPKMVF 287

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            +G+L LEG KMSKS GN +             + +    +R  +L
Sbjct: 288 GHGWLLLEGGKMSKSKGNVV-------DPVVLAQKYGVDSLRYFLL 326


>gi|293374330|ref|ZP_06620657.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646993|gb|EFF64976.1| leucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 811

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 56/137 (40%), Gaps = 14/137 (10%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 564 KEPFQRLFNQGMILGENNEKMSKSKGNVVNPDDIVESHG-------ADTLRLYEMFMGPL 616

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++ + L  +   L + W    T +  +   V++     L+     +  ++  ++ 
Sbjct: 617 DAAIAWSTEGLDGSRRFLDRVWRLFVTPEHTLAEKVVAENDGKLD-----KVYNETVKKV 671

Query: 376 TKNHDLLPIFNASAHIL 392
           T++++ L    A A ++
Sbjct: 672 TEDYEKLSFNTAIAQMM 688


>gi|293377353|ref|ZP_06623557.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|292644045|gb|EFF62151.1| isoleucine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 565 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 618 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 677

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|297569842|ref|YP_003691186.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925757|gb|ADH86567.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 510

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 44/120 (36%), Gaps = 13/120 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEHPSIPIN 93
           V    H+G+A   +V D + R  R    E    +++  TD   DKI + A          
Sbjct: 12  VNAQPHLGHAYTAVVADTVSRFNRLDGRE---VFLQTGTDEHGDKIAQAAAT------AG 62

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNE 151
                   + +  F      L    P +  R T+  H+  +  ++Q +   G  Y ++ +
Sbjct: 63  TEARDYVDRISAMFRAAWPPLLVE-PDNFIRTTDPHHVAVVQQILQKVYDRGDIYFSDYD 121



 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A  +E    + +H  + N+   KMSKS GN +   E++        ++ A  IR  +L
Sbjct: 273 AMGLEPYRRLHVHGYW-NVGETKMSKSIGNVVRPEEMVA-------AFGADTIRYFLL 322


>gi|293571723|ref|ZP_06682742.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291608180|gb|EFF37483.1| isoleucyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 932

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 565 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 618 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 677

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|195392274|ref|XP_002054784.1| GJ22603 [Drosophila virilis]
 gi|194152870|gb|EDW68304.1| GJ22603 [Drosophila virilis]
          Length = 583

 Score = 46.0 bits (108), Expect = 0.014,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 38/125 (30%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  + E+ V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRHPERRVRLCTGTDEHGTKIQQAAAAHKVPV--GQ 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               ++++    F                R T   H   + +   ++   GH Y A    
Sbjct: 87  YCDEVSARYRDVF----GAAGIEHDDF-IRTTEQRHKQAVAHFWHSLQSRGHIYSAAYSG 141

Query: 153 IFDTS 157
            +  S
Sbjct: 142 WYCVS 146



 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 13/72 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +     + +H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 296 AAGLAPPQQLHVHSHW-TVDGQKMSKSRHNVV-------DPVQAAQQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT 323
              H     +F+
Sbjct: 348 GVAH--SDGNFS 357


>gi|317484563|ref|ZP_07943470.1| isoleucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316924189|gb|EFV45368.1| isoleucyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 941

 Score = 46.0 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 9/115 (7%)

Query: 227 LGKVFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           LG   D++  G D      H + +A S     +     +  H   ++ EGRKMSKS GN 
Sbjct: 559 LGFPADLYLEGSDQHRGWFHSSLLA-SIGTRGVPPYKAVLTHGYVVDGEGRKMSKSIGNG 617

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           I ++E++           A +IR+ +    YRE +  + + +        +   T
Sbjct: 618 IELDEIISKHG-------AEIIRMWVSSVDYREDVRISAEIVNRLVDAYRRIRNT 665


>gi|297380582|gb|ADI35469.1| isoleucyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 920

 Score = 46.0 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       I  H   ++ +G 
Sbjct: 550 AVLEDYHGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKIITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|58585043|ref|YP_198616.1| valyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
 gi|81311597|sp|Q5GRK0|SYV_WOLTR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58419359|gb|AAW71374.1| Valyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
           malayi]
          Length = 855

 Score = 46.0 bits (108), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 48/147 (32%), Gaps = 16/147 (10%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD------ 74
              +   +    PT+    HIG+       D + R  R     K + Y     D      
Sbjct: 30  KKENTFTIDTPPPTISGKLHIGHIFSYCHTDFIARFQRMLG--KDIFYPIGFDDNGLPTE 87

Query: 75  -IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-----LAPTHQPRATNH 128
            + ++  +   +E       +    +  K+ Q+F +    +       L      + T  
Sbjct: 88  RLVEQTYKTRAREVGREKFIEMCHEVIEKSKQEFKELLRSVGISYDWSLEYHTISKETVT 147

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFD 155
           + QM   I  +   G+AY     I++D
Sbjct: 148 LSQM-SFID-LYNKGYAYRKMQPILWD 172


>gi|307946867|ref|ZP_07662202.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4]
 gi|307770531|gb|EFO29757.1| arginyl-tRNA synthetase [Roseibium sp. TrichSKD4]
          Length = 589

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 61/343 (17%), Positives = 110/343 (32%), Gaps = 74/343 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V DVL  LL +   +    Y  N  D   +I   AR        
Sbjct: 133 PT--GPMHVGHTRGAVVGDVLANLLAFAGYDVTREYYIN--DAGSQIDTLARSAFLRYRE 188

Query: 93  ---------------NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYL 135
                           D +  +  K    + +    L                I  M+ +
Sbjct: 189 ALGEDIGEIPAGLYPGDYLKPVGEKLAADYKE---SLKDKPEEEWLPVVKGLSISMMMDM 245

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKN 187
           I+  +        ++++ F   ++ + G  +  KIDE     R  +            + 
Sbjct: 246 IREDLAS---LNVHHDVFFSERTLHSRGEGNVSKIDEMLDALRNRDLVYQGTLPPPKGQV 302

Query: 188 PADF-----ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD------IHGG 236
           P D+      L++ S   +   ++     +        A    Y    F       I+  
Sbjct: 303 PDDWEDREQTLFRASDYGD---DTDRALKKSDGSYTYFAADVAYFRDKFQRDFKEMIYVL 359

Query: 237 GLDL-------IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           G D                 +Q+    R  +   ++           KMSK +G+FIT+ 
Sbjct: 360 GADHSGYAKRLQAVGKAVSDSQAEVVVRFCQLVKLFRGGEPF-----KMSKRSGDFITLR 414

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTE 329
           ++++             +R  ML   YR+   P+DF  Q++TE
Sbjct: 415 DVVDEVGRDP-------VRFMML---YRKNDAPLDFDFQKVTE 447


>gi|255019140|ref|ZP_05291266.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 177

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 17  AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 69

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 70  ASVDYQADVRVSDEILKQVSEVYRKIRNT 98


>gi|239980679|ref|ZP_04703203.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291452539|ref|ZP_06591929.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
 gi|291355488|gb|EFE82390.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
          Length = 538

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 47/142 (33%), Gaps = 12/142 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A      +   +
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTADANG--VSPQE 78

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               + ++  +   +              R T   H  ++   +Q++   G  Y+   E 
Sbjct: 79  WCDKLVTEAWKPLWEHLEIAN----DDFIRTTEKRHTDRVQEFVQDLWDKGEIYKGGYEG 134

Query: 153 IFDTSSIPNYGSFSRRKIDEQK 174
            +       Y       +D + 
Sbjct: 135 PYCVG-CEEY-KLPGELLDGEG 154


>gi|167630165|ref|YP_001680664.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592905|gb|ABZ84653.1| isoleucyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 50/133 (37%), Gaps = 13/133 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +GRKMSKS GN +   ++++          A ++RL +
Sbjct: 577 AVATKGTAPYKAVLTHGFLVDEQGRKMSKSLGNGVEPQDVIKDMG-------ADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AI 365
               YR  +  +   + +      K   T      +    DP   +  Y D+  +   A+
Sbjct: 630 ASVDYRTDVAASPNIMRQTADGYRKIRNTFRYFLGNLYDFDPKADAVAYEDMIELDRWAM 689

Query: 366 QALHKLARESTKN 378
             LHKL +  T  
Sbjct: 690 MLLHKLIQRVTAA 702


>gi|67540712|ref|XP_664130.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4]
 gi|40738676|gb|EAA57866.1| hypothetical protein AN6526.2 [Aspergillus nidulans FGSC A4]
 gi|259480097|tpe|CBF70918.1| TPA: leucyl-tRNA synthetase (AFU_orthologue; AFUA_6G04910)
           [Aspergillus nidulans FGSC A4]
          Length = 990

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 45/151 (29%), Gaps = 14/151 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R       V +     D      E A  +H   P       I
Sbjct: 104 HMGHLRVYTISDVLARFYRMRG--HDVLHPMGW-DAFGLPAENAAIQHGVSPAGWTTENI 160

Query: 100 TSKNTQQFVKDTTRLACLA--PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI-IFDT 156
                Q     +T         T  P    H  ++  +   +   G AY+A+  +     
Sbjct: 161 AKMKEQL-RSISTSFNWEREFATCSPEFYEHTQRIFLM---LYEKGLAYQADAMVNYDPV 216

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                    +  ++D      R   K  KK 
Sbjct: 217 DKT----VLANEQVDANGCSWRSGAKVEKKK 243


>gi|282863863|ref|ZP_06272921.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
 gi|282561564|gb|EFB67108.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
          Length = 534

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 12/135 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     +     
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANDVTPQAWC 80

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
              +      + +      L   A     R T   H  ++   +Q++      Y+     
Sbjct: 81  DKLV-----EEAWKPLWEHLNI-ANDDFIRTTEKRHTDRVQEFVQDLYDKDQIYKGGYEG 134

Query: 151 EIIFDTSSIPNYGSF 165
                       G  
Sbjct: 135 PYCVGCEEYKLPGDL 149



 Score = 37.1 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 55/177 (31%), Gaps = 41/177 (23%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H  + I  +    +        + NG+L + G KMSKSN   I   +L
Sbjct: 267 DVHLIGKDILRFH--SVIWPAMLMAQGLPLPGKVVANGWLMVGGEKMSKSNLTGIKPQDL 324

Query: 292 LETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV---------QRLTEAEILLSKWPQ-- 339
                     +     R   L    Y     F+          +   +   L S+     
Sbjct: 325 TS-------HFGVDAYRWYFLRAIAYGSDGSFSWEDFSARYTSELANDYGNLASRLAAMV 377

Query: 340 ---------TSTSKGIIDPAVLSALY-----------NDLNTVSAIQALHKLAREST 376
                     +T+ G  + AV   L             +L+    I A+    ++  
Sbjct: 378 GKYFGGALPEATAAGEAEQAVREGLARAVATADEKIGEELDFQGGILAIFDFVKQVN 434


>gi|256159715|ref|ZP_05457462.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256254977|ref|ZP_05460513.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261222163|ref|ZP_05936444.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|265998128|ref|ZP_06110685.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|260920747|gb|EEX87400.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
 gi|262552596|gb|EEZ08586.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+         
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWHSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|110799452|ref|YP_697210.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168209761|ref|ZP_02635386.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|110674099|gb|ABG83086.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170712061|gb|EDT24243.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
          Length = 514

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 47/118 (39%), Gaps = 11/118 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     +  D+L R  R    E  V +V         I+ +A++      IN +   +
Sbjct: 17  HIGRVSSWMAGDILARYHRAKGDE--VIFVSGSDCHGSPILNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYL-IQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R  + +  + +   I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFDIFTRTDSEYHEEQVKYIIKSLYNKGFIYEKETEEFYC 125


>gi|291541997|emb|CBL15107.1| methionyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 648

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/150 (14%), Positives = 43/150 (28%), Gaps = 21/150 (14%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           +   F    P    +Y          HIG+    +  D + R  R    +     V  +T
Sbjct: 3   QKKPFYITTP----IYY----PSGNPHIGHCYTTVACDSIARYRRMQGYD-----VMFLT 49

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQ 131
             D+  ++    E  +            +  + F      +         R T+  HI  
Sbjct: 50  GTDEHGLK---IEQKAAEKGVTPKEYVDEIVKTFKGLWKFMNISY-DRYIRTTDDYHIET 105

Query: 132 MIYLIQNIILHGHAYEAN--NEIIFDTSSI 159
           +  + + +   G+ Y+     +      S 
Sbjct: 106 VQKIFKELYDKGYIYKGEYKGKYCTPCESF 135


>gi|269137940|ref|YP_003294640.1| isoleucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|267983600|gb|ACY83429.1| isoleucyl-tRNA synthetase [Edwardsiella tarda EIB202]
 gi|304557990|gb|ADM40654.1| Isoleucyl-tRNA synthetase [Edwardsiella tarda FL6-60]
          Length = 948

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++             ++RL 
Sbjct: 587 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSVGNVVSPQQVMNKLG-------GDILRLW 639

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  +     +   T+ 
Sbjct: 640 VASTDYTGEMAVSDEILKRSADAYRRIRNTAR 671


>gi|194745961|ref|XP_001955453.1| GF18774 [Drosophila ananassae]
 gi|190628490|gb|EDV44014.1| GF18774 [Drosophila ananassae]
          Length = 568

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 10/140 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y E+ V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLKYPERKVRLCTGTDEHGTKIQQAAALHKVPVAT-- 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+ +  + F         L      R T   H   + +  + +   GH Y A    
Sbjct: 87  YCDQISERYREVFQNA----NILQDDF-IRTTEERHKRAVAHFWRTLNSRGHIYSAAYSG 141

Query: 153 IFDTSSIPNYGSFSRRKIDE 172
            +   S   + + S+ K+DE
Sbjct: 142 WYCV-SDETFLTDSQLKLDE 160



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 13/72 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  ++    +++H+ +  ++G+KMSKS  N +   +  E        +    +R  +L  
Sbjct: 296 AAGLQPPGQLYVHSHW-TVDGQKMSKSKQNVVNPVQAAE-------QYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT 323
              H     +++
Sbjct: 348 GVAH--SDGNYS 357


>gi|170289858|ref|YP_001736674.1| leucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173938|gb|ACB06991.1| leucyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 953

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 44/118 (37%), Gaps = 8/118 (6%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL++ H    I         +      + NG + +EG+KMSKS GN I I   +E  
Sbjct: 592 SGRDLVWNHLTFFIFNHVAIFPRDLWPRQIVVNGSVTMEGKKMSKSLGNIIPIRRAVEL- 650

Query: 296 KFGGRSWPAPVIRL-AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                 + A  IRL  M         DF+    +     L +    ++     D  ++
Sbjct: 651 ------FGADPIRLSVMGSAELSSDADFSPIVASSTLKRLFRILDLASKFSSFDEELI 702


>gi|118497462|ref|YP_898512.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida
           U112]
 gi|195536154|ref|ZP_03079161.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
 gi|166231608|sp|A0Q693|SYL_FRATN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118423368|gb|ABK89758.1| leucyl-tRNA synthetase [Francisella novicida U112]
 gi|194372631|gb|EDX27342.1| leucyl-tRNA synthetase [Francisella tularensis subsp. novicida FTE]
          Length = 813

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNTVDPQELIDR-------YGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +     I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYAELNKDI 639



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192


>gi|558850|gb|AAA91296.1| isoleucyl-tRNA synthetase [Campylobacter jejuni]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A   + K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRA-SKVFKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|288870475|ref|ZP_06114220.2| leucine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288867057|gb|EFC99355.1| leucine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 535

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 52/150 (34%), Gaps = 26/150 (17%)

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            F HH   +      +  E  A        L  +G KMSKS GN +   +++E       
Sbjct: 280 RFWHH--FLYDMGLVNTEEPYAKRTAQGLILGPDGDKMSKSKGNVVDPLDVVE------- 330

Query: 301 SWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK------WPQTSTSKGIIDPAV-- 351
            + A V+R   + M  Y     ++   +   +  L +            +   ++ A   
Sbjct: 331 EFGADVLRTYVLFMGDYGAATPWSDSSVKGCKRFLERVAGLCDIAGGEGATPELETAFHK 390

Query: 352 -LSALYND-----LNTVSAIQALHKLARES 375
            +  + ND      NT  AI AL  L  E 
Sbjct: 391 TIKKVSNDLEEMKFNT--AIAALMGLLNEI 418


>gi|206901012|ref|YP_002250639.1| lysyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
 gi|206740115|gb|ACI19173.1| lysyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
          Length = 524

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 22/128 (17%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE------RARQ 85
           G T     H+GN R ++  D LYR L+    E    Y   I D  D + +       +  
Sbjct: 29  GITPSGPIHLGNLREILTGDALYRALKEKGSEVEFIY---IADTFDPLRKVYPFLPESYA 85

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLACLAPTHQPRATNH-----IPQMIY 134
           EH   PI +                + F+     L         +A          ++I 
Sbjct: 86  EHVGKPICEIPDPEGCHENYAEHFLEPFLDAIKVLGIEP--KVIKAHESYKNGLYTEIID 143

Query: 135 LIQNIILH 142
           L       
Sbjct: 144 LTLENNEK 151


>gi|206974064|ref|ZP_03234982.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206748220|gb|EDZ59609.1| lysyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 517

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 124/427 (29%), Gaps = 74/427 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACLAPTHQP-- 123
             R +  ++D   ++     +  IP              ++F +                
Sbjct: 69  RFRKVPKNVDSSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEESLQVFGIEVEFIYQHA 128

Query: 124 --RATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRR--K 169
             R+  +   ++           I      G   E         T      G  +     
Sbjct: 129 EYRSGRYNKNILEALYKRKEIYDILMSFKTGECSEEEREGFYPVTLYCEKCGKDATTITH 188

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
            DE     R   +   +     +    +  M+  W+  W      W IE           
Sbjct: 189 FDEVLKTVRYECECGNQTELSVL---NTNEMKLNWKIDWPMR---WMIEDVVFEP----- 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFIT 287
                 GG D         +++        + A  +I   F+  +G   KMS S+GN IT
Sbjct: 238 ------GGRDHSSETGSYNVSKEIARKIFNREAPHYIAYDFIGTKGHHEKMSSSSGNSIT 291

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK 344
            +ELL       + +   VI        YR    F     + +        +   +  +K
Sbjct: 292 PSELL-------KVYLPEVILFMF--AKYRPDAAFHIGLDEDVIRNYTEYERLKDSYENK 342

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
            + +  +  A+              KL+R  +   +  P FN  A IL +      + + 
Sbjct: 343 TLKNEDLFDAI--------------KLSRVDSGFKE-YPKFNQVAGILPLLNFDSSILQG 387

Query: 405 ISIAIEK 411
               I++
Sbjct: 388 TLDEIDR 394


>gi|15787607|gb|AAL06175.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
          Length = 40

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 6/44 (13%)

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           R      K F  AD IR++L +    L D        + T W++
Sbjct: 1   RNRAKDQKDFLKADSIREELLNHKIALMDT------PQGTIWEK 38


>gi|83311547|ref|YP_421811.1| methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82946388|dbj|BAE51252.1| Methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 516

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +     V+ +T  D+      + E  +     
Sbjct: 16  VNDKPHIGHAYTTLACDVLARFKRLDGFD-----VKFLTGTDEH---GQKVEKSAEAFGV 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N+  F +    L C       R T   H      L   ++  G  Y    E 
Sbjct: 68  TPQALADQNSANFRELAKILGCTNDDF-IRTTEARHKAACQALWDKLVAKGDIYLGAYEG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAFY 136


>gi|15964550|ref|NP_384903.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307314740|ref|ZP_07594336.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307320034|ref|ZP_07599455.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|15073728|emb|CAC45369.1| Probable isoleucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306894249|gb|EFN25014.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306898964|gb|EFN29610.1| isoleucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 969

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 65/186 (34%), Gaps = 30/186 (16%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +G KMSKS GN +T  E+
Sbjct: 598 DVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVITHGFTMDEKGEKMSKSKGNTVTPQEV 657

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLSKWPQTSTS 343
           ++          A ++RL ++ T Y     +  QRL         +A   L    +    
Sbjct: 658 MKDAG-------ADILRLWVMTTDY-----WEDQRLGKTIIQTNIDAYRKLRNTIRWMLG 705

Query: 344 KGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILGIEV 396
               D   + AL +              +  L +L RE     D   I  A      +E+
Sbjct: 706 TLAHDKGEVVALSD---MPELERLMLHRLAELDRLVREGYDAFDFKRIARALIDFSNVEL 762

Query: 397 CKEHLN 402
              + +
Sbjct: 763 SAFYFD 768


>gi|222096130|ref|YP_002530187.1| lysine--tRNA ligase, class i (lysyl-tRNA synthetase, class i)
           [Bacillus cereus Q1]
 gi|221240188|gb|ACM12898.1| lysine--tRNA ligase, class I (lysyl-tRNA synthetase, class I)
           [Bacillus cereus Q1]
          Length = 517

 Score = 45.6 bits (107), Expect = 0.015,   Method: Composition-based stats.
 Identities = 68/427 (15%), Positives = 124/427 (29%), Gaps = 74/427 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGAVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACLAPTHQP-- 123
             R +  ++D   ++     +  IP              ++F +                
Sbjct: 69  RFRKVPKNVDSSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEESLQVFGIEVEFIYQHA 128

Query: 124 --RATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRR--K 169
             R+  +   ++           I      G   E         T      G  +     
Sbjct: 129 EYRSGRYNKNILEALYKRKEIYDILMSFKTGECSEEEREGFYPVTLYCEKCGKDATTITH 188

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
            DE     R   +   +     +    +  M+  W+  W      W IE           
Sbjct: 189 FDEVLKTVRYECECGNQTELSVL---NTNEMKLNWKIDWPMR---WMIEDVVFEP----- 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFIT 287
                 GG D         +++        + A  +I   F+  +G   KMS S+GN IT
Sbjct: 238 ------GGRDHSSETGSYNVSKEIARKIFNREAPHYIAYDFIGTKGHHEKMSSSSGNSIT 291

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK 344
            +ELL       + +   VI        YR    F     + +        +   +  +K
Sbjct: 292 PSELL-------KVYLPEVILFMF--AKYRPDAAFHIGLDEDVIRNYTEYERLKDSYENK 342

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
            + +  +  A+              KL+R  +   +  P FN  A IL +      + + 
Sbjct: 343 TLKNEDLFDAI--------------KLSRVDSGFKE-YPKFNQVAGILPLLNFDSSILQG 387

Query: 405 ISIAIEK 411
               I++
Sbjct: 388 TLDEIDR 394


>gi|194468301|ref|ZP_03074287.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
 gi|194453154|gb|EDX42052.1| valyl-tRNA synthetase [Lactobacillus reuteri 100-23]
          Length = 884

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P D   W++   +   W S   W     GW    SA    Y      +   G D+IF   
Sbjct: 439 PKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLV--TGYDIIFFWV 496

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++       + +   
Sbjct: 497 SRMIFQSLEFTGRAPFKNVLLHGLIRDEQGRKMSKSLGNGIDPMDVI-------KKYGVD 549

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+  ++  A   ++K    S 
Sbjct: 550 ALRWFLITGSTPGQDIRFSYTKMDAAWNFINKIWNASR 587


>gi|194873283|ref|XP_001973176.1| GG15950 [Drosophila erecta]
 gi|190654959|gb|EDV52202.1| GG15950 [Drosophila erecta]
          Length = 938

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  
Sbjct: 600 MSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGTDALRWW 652

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   L K   T
Sbjct: 653 VASHGTQHM--SITVSDKLLQQAAENLGKVRGT 683


>gi|166157037|emb|CAO79494.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [uncultured candidate division WWE3 bacterium
           EJ0ADIGA11YD11]
          Length = 471

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 72/351 (20%), Positives = 126/351 (35%), Gaps = 71/351 (20%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D + R  R   G + V +V    +   K+   A++    +   +
Sbjct: 14  VNDVIHIGHAYQKILADCVARFERIRRGSENVFFVTGTDEHGQKVYNVAKERGVDVK--E 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--- 149
            +  I+ K+ +Q  +D+ +   ++     R T+  H        + +   G+ Y+ N   
Sbjct: 72  FVDEISKKDQEQ--QDSIQ---ISYDRFIRTTDGDHKKTAEDFFRKVYNAGYIYKDNYKG 126

Query: 150 ----NEIIFDTSSIPNYGS------FSRRKIDEQKMGTRVPEKY------HKKNPADFIL 193
                   + T      G          + ++E+    +           ++KNP DF+L
Sbjct: 127 LYCEGCESYKTEKDLINGRCALHPGLEIQVVEEENYFFKFSSFKDFLRTLYEKNP-DFVL 185

Query: 194 WKRSTPMEPG------WESPWGRGRP--GWHIECSAMSSHYLGKVFD-----------IH 234
              S   E         + P  R +    W IEC    +H +   FD           ++
Sbjct: 186 -PNSRYREMYAFIDTIEDIPITRRKEKLPWGIECPIDKNHVIWVWFDALINYLTFGLQVN 244

Query: 235 GGGLDLIFPHH---ENEIAQSCCADRIEKTANIWI--H---NGFLNLEGRKMSKSNGNFI 286
               D    H    +N    +     + K A   +  H   N FL++ G+K+SKS GN +
Sbjct: 245 SWDEDTEIVHFLGKDNARMHALLWPCMLKAAGYSMPTHVYVNAFLSMNGKKISKSLGNIV 304

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPI----DFTVQRLTEAEIL 333
              +L+E        + A  +R   L   Y  PI    DF+     E    
Sbjct: 305 APKDLVER-------YGADPVRYYFLR--Y-GPIIEDSDFSESHFQEVYNA 345


>gi|218282236|ref|ZP_03488535.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
 gi|218216774|gb|EEC90312.1| hypothetical protein EUBIFOR_01117 [Eubacterium biforme DSM 3989]
          Length = 870

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 12/128 (9%)

Query: 186 KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           ++P D   WK+   +   W S   W     GW  E +A    Y     D+   G D+IF 
Sbjct: 429 EDPKDIENWKQDEDVLDTWFSSALWPFSTLGW-PETTADLERYFPN--DVLVTGYDIIFF 485

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
                  Q+    +     ++ IH    + +GRKMSKS GN I   ++++ K        
Sbjct: 486 WVARMAFQTRYCMKNRPFKDVLIHGLVRDTQGRKMSKSLGNGIDPMDVIQEKG------- 538

Query: 304 APVIRLAM 311
           A  +R  +
Sbjct: 539 ADALRFFL 546


>gi|70606212|ref|YP_255082.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363440|sp|Q4JBP0|SYL1_SULAC RecName: Full=Leucyl-tRNA synthetase 1; AltName:
          Full=Leucine--tRNA ligase 1; Short=LeuRS 1
 gi|68566860|gb|AAY79789.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
          Length = 942

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      HIG+ R  I  D+  R LR         +    T
Sbjct: 39 PYTNSPLHIGHGRTYITADIYARYLRMKGYNVLFPFAFQFT 79



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 8/90 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +         +K     + NGF+ + G+KMSKS GN   +N+ +   
Sbjct: 583 SGRDLVQNHIPYYLYHHVGVLGEDKVPKRIVLNGFIRVGGKKMSKSFGNVYPLNKAI--- 639

Query: 296 KFGGRSWPAPVIRLAMLMTHYRE-PIDFTV 324
               R +    +RLA+  T      I+F+ 
Sbjct: 640 ----REYGVDTVRLALTSTSSLSDDIEFSP 665


>gi|313885106|ref|ZP_07818858.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619797|gb|EFR31234.1| valine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 877

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ +H    + EGRKMSKS GN I   +++E  
Sbjct: 481 TGYDIIFFWVSRMIFQSLEFTGQRPFKNVLLHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 538

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
                 +    +R  +       + + ++ ++L  A   ++K    S 
Sbjct: 539 -----EYGVDALRWFLANGSAPGQDVRYSPEKLAAAWNFINKIWNASR 581


>gi|16331573|ref|NP_442301.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501033|sp|Q55729|SYM_SYNY3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1001640|dbj|BAA10371.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 532

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +V D L R  R    +     V  IT  D+      + +  +     
Sbjct: 18  VNDVPHLGSAYTTVVADTLARFKRLQGYD-----VLMITGTDEH---GQKIQRTAEAQEL 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  +   +F +    L  L      R T+  H+  +    Q +   G  Y A  + 
Sbjct: 70  DPQTHCDRTVVKFKELWRSLNILY-DRFSRTTDPRHLAIVKDFFQRVWDKGDIYLAQQQG 128

Query: 153 IFDTS 157
            +  +
Sbjct: 129 WYCVA 133



 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 14/96 (14%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H     A    A+     A ++ H GFL  +G+KM KS GN +   
Sbjct: 260 PINLHLIGKDILRFHAVYWPAMLMSAELAIP-AQVFGH-GFLTKDGQKMGKSLGNTVDPL 317

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +L+         +     R   L     + I+F   
Sbjct: 318 DLINR-------YGEDAFRYYFL-----KEIEFGKD 341


>gi|325679112|ref|ZP_08158706.1| methionine--tRNA ligase [Ruminococcus albus 8]
 gi|324109236|gb|EGC03458.1| methionine--tRNA ligase [Ruminococcus albus 8]
          Length = 659

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 13/127 (10%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              HIG+    +  D + R  R    +     V  +T  D+      + E  +       
Sbjct: 15  GDPHIGHCYTTVACDSIARYKRMQGYD-----VMFLTGTDEH---GQKIEDKARDKGVTP 66

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--NEI 152
                +    F K  + +         R T+  H+  +  + + +   G+ Y+     + 
Sbjct: 67  QQYVDEVVATFKKLWSYMNISY-DRYIRTTDDYHVESVQKIFKELYDKGYIYKGEYTGKY 125

Query: 153 IFDTSSI 159
                S 
Sbjct: 126 CTPCESF 132


>gi|218675110|ref|ZP_03524779.1| putative methionyl-tRNA synthetase [Rhizobium etli GR56]
          Length = 348

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 13/105 (12%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G+   I G G+     H     A    A  +   ++I +H G++ ++GRK+ KS GN I 
Sbjct: 88  GERIHIVGKGISKF--HAIYWPAILLSA-GLPPPSSILVH-GYVTVDGRKIGKSAGNGID 143

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYRE--PIDFTVQRLTEA 330
              +++             +R  +L  H R     DF+ +RL  A
Sbjct: 144 PESIIDAYG------TPDALRYYLLR-HIRSGDDGDFSGERLEAA 181


>gi|321458602|gb|EFX69668.1| hypothetical protein DAPPUDRAFT_300874 [Daphnia pulex]
          Length = 1175

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 41/135 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     +   +       NG L L   KMSKS 
Sbjct: 659 FWYPVDLRVSGKDLVPNHLTYFLYNHVAIW--PNEPNRWPQAIRANGHLLLNSEKMSKST 716

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+++ ++        + A  +RLA+                              +
Sbjct: 717 GNFLTLSDAID-------KFSADGMRLAL----------------------------ADS 741

Query: 343 SKGIIDPAVLSALYN 357
              + D   + A+ +
Sbjct: 742 GDSVEDANFVEAMAD 756


>gi|312898858|ref|ZP_07758246.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620020|gb|EFQ03592.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 827

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 27/186 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H                 +  E    + +  G +  EG KMSKS GN 
Sbjct: 531 DQYIGGIEHAILHLMYSRFLMKVFRDAGLVEASEPFERL-LTQGMVLKEGSKMSKSKGNV 589

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           ++  E+L         + A   RL +L        +D++ + +  +   L++  +     
Sbjct: 590 VSPEEILS-------KYGADTARLFILFAAPPERDLDWSDKGVEGSYRFLNRVWRIVHQF 642

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
             I             T    + ++  A ++ +  +   +   +  I G +     LN  
Sbjct: 643 ADIAK-----------TAEVSKDIYSEADKALRLVEYTSVAKITDDIQG-DDGNYALNTA 690

Query: 405 ISIAIE 410
           +S  +E
Sbjct: 691 VSAVME 696



 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 39/144 (27%), Gaps = 14/144 (9%)

Query: 19  QAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              +      YV    P      H+G+ R   + DV+ R  R       V +        
Sbjct: 25  TPDNNGKPPYYVLEMFPYPSGNLHMGHVRNYTIGDVIARYRRMNGYN--VLHPMGFDAFG 82

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM--IY 134
                 A      I  N   +  T  N     +    L       +  AT H        
Sbjct: 83  MPAENAA------IKRNIPPAEWTYDNIANMERQQKSLGLSYDWDREVATCHKDYYRWTQ 136

Query: 135 LI-QNIILHGHAYEANNEI-IFDT 156
            I + +   G AY    ++   DT
Sbjct: 137 WIFELLYKRGLAYRKEAKVNWCDT 160


>gi|297537731|ref|YP_003673500.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257078|gb|ADI28923.1| isoleucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 939

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  G KMSKS GN +   ++++T       + A ++RL   
Sbjct: 591 CAIDGRAPYNALLTHGFVVDGAGHKMSKSKGNVVAPQKVMDT-------YGADILRLWTA 643

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 644 STDYSGELTISDEILKRVAESYRRIRNT 671


>gi|218888174|ref|YP_002437495.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|254782495|sp|B8DJF0|SYL_DESVM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218759128|gb|ACL10027.1| leucyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 834

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 16/128 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEI----AQSCCADRI--EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H         A   C      E  AN+ +  G +  EG KMSKS G
Sbjct: 534 PVDQYIGGVEHAILHLLYSRFFVKALRDCGYMDLDEPFANL-LTQGMVLKEGAKMSKSKG 592

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +   E++         + A  +RL  L         D++   +  +   + + W    
Sbjct: 593 NVVDPTEMIAR-------YGADTVRLFCLFAAPPERDFDWSDSGIEGSYRFIGRIWRLAE 645

Query: 342 TSKGIIDP 349
              G++ P
Sbjct: 646 ELSGVLLP 653


>gi|302342845|ref|YP_003807374.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301639458|gb|ADK84780.1| leucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 830

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 55/161 (34%), Gaps = 37/161 (22%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  ++++         + A  +RL  +      
Sbjct: 571 EPFLNL-LTQGMVIKDGAKMSKSKGNVVDPDDMVAR-------YGADTVRLFSLFAAPPE 622

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------------AVLSALYND 358
             ++++ Q +  A   L +  +   +                           +  +  D
Sbjct: 623 RDLEWSDQGVEGAHRFLGRLWRLGLAVAETPAGERPGPCDGPLGELRRKAHETIKKVTED 682

Query: 359 -----LNTVSAIQALHKLARESTKNHDLLPIFNA--SAHIL 392
                 NT  AI AL +L  + +       + +    A +L
Sbjct: 683 TDRFQFNT--AIAALMELINQISLVEQDAALADDPRRAAVL 721


>gi|293560464|ref|ZP_06676956.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|314937861|ref|ZP_07845177.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
 gi|314941352|ref|ZP_07848245.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|314951348|ref|ZP_07854402.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|314992821|ref|ZP_07858222.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|314997981|ref|ZP_07862876.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|291605612|gb|EFF35054.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313587993|gb|EFR66838.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a01]
 gi|313592625|gb|EFR71470.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133B]
 gi|313596565|gb|EFR75410.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133A]
 gi|313599775|gb|EFR78618.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133C]
 gi|313642719|gb|EFS07299.1| isoleucine--tRNA ligase [Enterococcus faecium TX0133a04]
          Length = 932

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 565 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 618 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 677

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|257893530|ref|ZP_05673183.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|257829909|gb|EEV56516.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
          Length = 930

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 563 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 615

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 616 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 675

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 676 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 729


>gi|256369417|ref|YP_003106925.1| methionine--tRNA ligase [Brucella microti CCM 4915]
 gi|255999577|gb|ACU47976.1| methionine--tRNA ligase [Brucella microti CCM 4915]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137


>gi|254719073|ref|ZP_05180884.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984063|ref|ZP_06096798.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838355|ref|ZP_07471200.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264662655|gb|EEZ32916.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406495|gb|EFM62729.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIID------PA 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D       A
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEA 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAVFAVVAEANR 424


>gi|169832008|ref|YP_001717990.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|238688343|sp|B1I5R7|SYL_DESAP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169638852|gb|ACA60358.1| leucyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 826

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 44/124 (35%), Gaps = 15/124 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 529 PVDQYIGGVEHAILHLMYSRFFTKVLYDMGLVKVQEPFTNL-LTQGMVLKDGAKMSKSKG 587

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  ++L         + A   RL +L        ++++ Q +      L +  +   
Sbjct: 588 NVVSPEDILNR-------YGADTTRLFVLFAAPPERDLEWSDQGVEGCYRFLQRVWRLVN 640

Query: 343 SKGI 346
           S   
Sbjct: 641 SVAD 644


>gi|118097622|ref|XP_414663.2| PREDICTED: similar to Leucyl-tRNA synthetase, cytoplasmic
           (Leucine--tRNA ligase) (LeuRS) [Gallus gallus]
          Length = 1177

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 57/163 (34%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     D+ EK       NG L L   KMSKS 
Sbjct: 665 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWS--DQKEKWPVAVRANGHLLLNSEKMSKST 722

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+++ ++        + A  +RL                 L +A   +        
Sbjct: 723 GNFLTLSQAVD-------KFSADGMRL----------------ALADAGDTVE------- 752

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 753 -----DANFVEAMAD-----AGILRLYTWVEWVKEMIANRDSL 785


>gi|57641396|ref|YP_183874.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|62296831|sp|Q8NKR7|SYL_PYRKO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57159720|dbj|BAD85650.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 967

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 56/165 (33%), Gaps = 17/165 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I         +        NGF  LEG+KMSKS GN +   
Sbjct: 603 PLDWRCSAKDLIPNHLTFFIFNHVAIFDKKHWPKGIAVNGFGTLEGQKMSKSKGNVLNFI 662

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++ +  +    D+  + + +    + ++ +  +     +
Sbjct: 663 DAIEENG-------ADVVRLYIMGLAEHDSDFDWRRKEVGKLRKQVERFYELVSEFATYE 715

Query: 349 PAVLSALYNDLNTVSAIQA--LHKLARESTKNHDLLPIFNASAHI 391
                 L +       I    LH+L +        L  F     +
Sbjct: 716 AKEGVELKD-------IDRWMLHRLNKAIEGATKALEEFRTRTAV 753



 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 5/63 (7%)

Query: 16 TEFQA---IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
            F+      P   + Y+     Y     H+G+AR   + DV+ R  R            
Sbjct: 21 RVFEPDRKAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMGW 80

Query: 71 NIT 73
          +IT
Sbjct: 81 HIT 83


>gi|73669025|ref|YP_305040.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|90103016|sp|Q46CD2|SYK_METBF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|72396187|gb|AAZ70460.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 537

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 15/99 (15%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE------RARQ 85
           G T     HIGN R ++  D +YR L          Y   I D  D + +       +  
Sbjct: 27  GITPSGNIHIGNMREVVTADAVYRALSNKGANADFIY---IADNYDPLRKVYPFLPESYV 83

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLACLA 118
           EH   PI++        +       + F++   RL    
Sbjct: 84  EHVGKPISEIPCPCGNCANYAEHFLKPFLEALRRLGINP 122


>gi|218562677|ref|YP_002344456.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|12644012|sp|P41257|SYI_CAMJE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|112360383|emb|CAL35179.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I         ++  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVI-------ASEYVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|121612940|ref|YP_001000740.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005660|ref|ZP_02271418.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|87249207|gb|EAQ72168.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.016,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 56/150 (37%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I         ++  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVI-------ASEYVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|306840483|ref|ZP_07473242.1| methionyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289498|gb|EFM60716.1| methionyl-tRNA synthetase [Brucella sp. BO2]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137


>gi|300313639|ref|YP_003777731.1| arginyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300076424|gb|ADJ65823.1| arginyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
          Length = 577

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 59/317 (18%), Positives = 99/317 (31%), Gaps = 53/317 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+ R   + D L  LL     +    +  N     I  +   +  RAR   
Sbjct: 134 PT--GPLHVGHGRQGALGDALSSLLEAQGYDVLREFYYNDAGVQIATLATSVQARARGFK 191

Query: 88  PSIPINDAISIITSKNTQQFVKD-TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           P        S           +D   +    A   +P  T      +  I++I     AY
Sbjct: 192 PG-DAEWPESAYNGDYIADIARDFLDKKTVSASDGEP-VTGSGE--VDDIESIRRFAVAY 247

Query: 147 ---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
              E + ++        NY   S    D +            K    D  LW R+T    
Sbjct: 248 LRHEQDLDLQAFGVKFDNYYLESSLYADGKVAAAVDALIAAGKTYEQDGALWLRTTDYGD 307

Query: 203 -------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA--- 250
                    +  +    P   +HI          GKV +I G        HH   IA   
Sbjct: 308 DKDRVMKKTDGTYTYFVPDVAYHIN---KWQRGYGKVINIQGSD------HH-GTIARVR 357

Query: 251 ---QSCCADRIEKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLE---TKKFGGR 300
              Q+      +   +  +H   + +   G   K+SK  G+++T+ +L+E    +   G+
Sbjct: 358 AGLQAAGVGIPQGYPDYVLHK-MVTVMRNGEEVKISKRAGSYVTLRDLIEWSAGEPVEGQ 416

Query: 301 SWPA----PVIRLAMLM 313
                     +R  ++ 
Sbjct: 417 ERDLTRGRDAVRFFLIS 433


>gi|262282734|ref|ZP_06060502.1| isoleucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262025|gb|EEY80723.1| isoleucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 930

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y+DL +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDTVAYDDLRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      +  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVRTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|257890202|ref|ZP_05669855.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257826562|gb|EEV53188.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
          Length = 930

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 563 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 615

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 616 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 675

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 676 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 729


>gi|255527796|ref|ZP_05394647.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
 gi|255508509|gb|EET84898.1| methionyl-tRNA synthetase [Clostridium carboxidivorans P7]
          Length = 594

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 60/186 (32%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +     ++ H G+L ++G KMSKS GN +    
Sbjct: 205 DVHLVGKDILRF--HTIYWPIMLMALGLPLPKQVFGH-GWLLVDGGKMSKSKGNVV---- 257

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------- 339
                      + A  +R  +L       I F    L   EI + K              
Sbjct: 258 ---DPVLLVNHFGADPVRYYLLR-----EIPFGADGLFNNEIFIKKINSDLANDLGNLLS 309

Query: 340 ---------------TSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                            T+K  ID  ++  AL          ++L    A+  + +L   
Sbjct: 310 RTCAMVEKYFGGTIPAPTAKEAIDDELIKVALNTPKAAEQCIDNLRIPEALDCIWELIGR 369

Query: 375 STKNHD 380
           + K  D
Sbjct: 370 ANKYID 375


>gi|254693711|ref|ZP_05155539.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261213983|ref|ZP_05928264.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260915590|gb|EEX82451.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137


>gi|253828110|ref|ZP_04870995.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511516|gb|EES90175.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 927

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +       I  H   ++ +G KMSKS GN +   E+L       + + + ++RL +
Sbjct: 589 SCAVNEKAPYKAIVTHGFTMDEKGEKMSKSKGNVVVPKEVL-------KEFGSEILRLWV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            M+ Y+     +   L +      K   T
Sbjct: 642 AMSDYQNDQRISNNILKQVGENYRKIRNT 670


>gi|225631226|ref|ZP_03787919.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591079|gb|EEH12268.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 792

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 16/135 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PT+    HIG+       D + R  R     K V Y     D       + ++  +   +
Sbjct: 8   PTISGKLHIGHIFSYCHTDFIARFQRMLG--KDVFYPIGFDDNGLPTERLVEQTYKTRAK 65

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC-----LAPTHQPRATNHIPQMIYLIQNII 140
           E     + +    +  K+ Q+F +    +       L      + T  + QM   I  + 
Sbjct: 66  EVGREKLIEMCHEVIEKSKQEFKELLKSVGISYDWDLEYHTISKETVTLSQM-SFID-LY 123

Query: 141 LHGHAYEANNEIIFD 155
             G+AY     I++D
Sbjct: 124 KKGYAYRKMQPILWD 138


>gi|194900723|ref|XP_001979905.1| GG21397 [Drosophila erecta]
 gi|190651608|gb|EDV48863.1| GG21397 [Drosophila erecta]
          Length = 579

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 52/152 (34%), Gaps = 11/152 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y E+ V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLCTGTDEHGTKIQQAASLHGIPVA--K 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+ +  + F   +     + P    R T   H   +    + +   GH Y A    
Sbjct: 87  YCDDISQRYREVFRSAS-----IQPEDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYSG 141

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +   S   + + S+ ++DE   GTR   +  
Sbjct: 142 WYCV-SDETFLTDSQLRLDE-ASGTRYSLESG 171



 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 23/129 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  ++    +++H+ +  ++G+KMSKS  N +             R +    +R  +L  
Sbjct: 296 AAGLKPPGQLYVHSHW-TVDGQKMSKSKHNVV-------DPVQAARQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT---VQRLTEAE------ILLSKWPQTSTSKGIIDP-AVLSALYNDLNT 361
              H     +++    QR+  +E       LLS+    S + G I P A    L + L +
Sbjct: 348 GVAH--SDGNYSHVKAQRILNSELADTLGNLLSRACAKSLNPGQIYPSASAEHLADLLRS 405

Query: 362 VSAIQALHK 370
           + A + L  
Sbjct: 406 LDAAKRLQD 414


>gi|163843264|ref|YP_001627668.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163673987|gb|ABY38098.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPSAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|110004582|emb|CAK98919.1| probable isoleucyl-trna synthetase protein [Spiroplasma citri]
          Length = 908

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +  H    + +GRKMSKS GN I+   + +          A ++R+ +
Sbjct: 565 SVVATGHAPYQVVLSHGFANDEKGRKMSKSLGNVISPLSITDQCG-------ADILRMWV 617

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               YR+ +    + L +      K   T           L A  ND N
Sbjct: 618 ASVDYRDDVKIGSEILKQIAEAYRKIRNTLR--------FLLANLNDFN 658


>gi|69244704|ref|ZP_00602968.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879376|ref|ZP_05659029.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257881758|ref|ZP_05661411.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260558818|ref|ZP_05831007.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206528|ref|ZP_05921228.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289565438|ref|ZP_06445887.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293568290|ref|ZP_06679614.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294614701|ref|ZP_06694603.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619001|ref|ZP_06698496.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294621613|ref|ZP_06700778.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314950111|ref|ZP_07853397.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
 gi|68196295|gb|EAN10724.1| Isoleucyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813604|gb|EEV42362.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257817416|gb|EEV44744.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|260075277|gb|EEW63590.1| isoleucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260079238|gb|EEW66929.1| isoleucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289162767|gb|EFD10618.1| isoleucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291589002|gb|EFF20826.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291592439|gb|EFF24046.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594662|gb|EFF26044.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598778|gb|EFF29830.1| isoleucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|313643552|gb|EFS08132.1| isoleucine--tRNA ligase [Enterococcus faecium TX0082]
          Length = 932

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 565 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 618 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 677

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|293553195|ref|ZP_06673832.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602605|gb|EFF32820.1| isoleucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 932

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 565 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 618 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 677

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|227532988|ref|ZP_03963037.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227189389|gb|EEI69456.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 660

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIGNA   I  DVL R  R    +        +T  D+  ++ 
Sbjct: 4   KPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFF-----LTGTDEHGLKI 58

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNII 140
            ++         A     +   +Q  K              R T   H+  +  +++ +I
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLWKMLEITN----DKFIRTTDKEHVEAVQTIVERLI 114

Query: 141 LHGHAYEANNEIIFDTS 157
             G  Y       +   
Sbjct: 115 KQGDVYLGEYTGWYSVE 131


>gi|239630434|ref|ZP_04673465.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301067585|ref|YP_003789608.1| methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|239526717|gb|EEQ65718.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300439992|gb|ADK19758.1| Methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 660

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIGNA   I  DVL R  R    +        +T  D+  ++ 
Sbjct: 4   KPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFF-----LTGTDEHGLKI 58

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNII 140
            ++         A     +   +Q  K              R T   H+  +  +++ +I
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLWKMLEITN----DKFIRTTDKEHVEAVQTIVERLI 114

Query: 141 LHGHAYEANNEIIFDTS 157
             G  Y       +   
Sbjct: 115 KQGDVYLGEYTGWYSVE 131


>gi|242010725|ref|XP_002426109.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212510156|gb|EEB13371.1| prolyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 1305

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/164 (14%), Positives = 54/164 (32%), Gaps = 42/164 (25%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +    L +  +  +  K +       D  +   E+A  E          
Sbjct: 164 GYLHIGHAKAAL----LNQYYKELFDGKLIMRF----DDTNPDKEKADFEKVI------- 208

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
                      ++D + L    P      +++   M+ +   ++ +G AY  + +   + 
Sbjct: 209 -----------LEDVSLLQIK-PDKFSHTSDYFDVMLEMCTKLLENGKAYVDDTD--PEI 254

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
                          EQ++ ++      +KN   F +WK     
Sbjct: 255 MKQER----------EQRVESKNRNNSKEKN---FKMWKEMVEG 285


>gi|191639512|ref|YP_001988678.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|190713814|emb|CAQ67820.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|327383610|gb|AEA55086.1| Methionyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327386801|gb|AEA58275.1| Methionyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 660

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIGNA   I  DVL R  R    +        +T  D+  ++ 
Sbjct: 4   KPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFF-----LTGTDEHGLKI 58

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNII 140
            ++         A     +   +Q  K              R T   H+  +  +++ +I
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLWKMLEITN----DKFIRTTDKEHVEAVQTIVERLI 114

Query: 141 LHGHAYEANNEIIFDTS 157
             G  Y       +   
Sbjct: 115 KQGDVYLGEYTGWYSVE 131


>gi|323136445|ref|ZP_08071527.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322398519|gb|EFY01039.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 520

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 11/128 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              HIG+A   I  D   R  R    +  V +V  + +   K+   A +E          
Sbjct: 18  GAPHIGHAYERIATDAFARFKRLDGYD--VLFVTGMDEHGQKMQRTAEKEGL------TP 69

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
             +  +   QF +    L         R T   H   ++ + + +  +G  Y +     +
Sbjct: 70  QGLADRTAAQFARMGEALNA-RADDIVRTTQERHKETVLEIWRRMEANGDIYLSKYSGWY 128

Query: 155 DTSSIPNY 162
                  Y
Sbjct: 129 SVRDEAYY 136


>gi|292654972|ref|YP_003534869.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371457|gb|ADE03684.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 740

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 49/150 (32%), Gaps = 19/150 (12%)

Query: 16  TEFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
            +F   +P+ +    CG P      HIG+ R  +  D+  R LR     +   +V     
Sbjct: 4   EDFPTENPAVV---TCGLPYANGDLHIGHLRTYVGGDIYSRSLRTLG--QQTAFVSGSDM 58

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP----THQPRATNHIP 130
               +   A +E               ++ +++     R          TH    T    
Sbjct: 59  HGTPVAVNAEKE------GVTPEEFALRHHEKYEATFPRFNIEFDNYGHTHDETNTELTQ 112

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
           ++   ++ +   G+ YE    + +D  +  
Sbjct: 113 EI---VRTLEAEGYVYEKEIPVAYDPDADQ 139


>gi|116496032|ref|YP_807766.1| methyonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|116106182|gb|ABJ71324.1| methionyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 660

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 13/137 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIGNA   I  DVL R  R    +        +T  D+  ++ 
Sbjct: 4   KPTFYVTTPIYYPSGKLHIGNAYTTIAADVLARYKRLMGYDVFF-----LTGTDEHGLKI 58

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNII 140
            ++         A     +   +Q  K              R T   H+  +  +++ +I
Sbjct: 59  EQKADKLGVTPQAYVDGMATQIKQLWKMLEITN----DKFIRTTDKEHVEAVQTIVERLI 114

Query: 141 LHGHAYEANNEIIFDTS 157
             G  Y       +   
Sbjct: 115 KQGDVYLGEYTGWYSVE 131


>gi|306843870|ref|ZP_07476465.1| methionyl-tRNA synthetase [Brucella sp. BO1]
 gi|306275625|gb|EFM57349.1| methionyl-tRNA synthetase [Brucella sp. BO1]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIID------PA 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D       A
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALEA 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|212636473|ref|YP_002312998.1| isoleucyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|254782434|sp|B8CSC1|SYI_SHEPW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|212557957|gb|ACJ30411.1| Isoleucyl-tRNA synthetase, class Ia [Shewanella piezotolerans WP3]
          Length = 940

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 553 EFNGHEVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSVGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 613 VIAPQHVTNKLG-------ADILRLWVAATDYSGEMTVSDEILKRSADAYRRIRNTAR 663


>gi|23501876|ref|NP_698003.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225627473|ref|ZP_03785510.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|254701747|ref|ZP_05163575.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|254706809|ref|ZP_05168637.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254710081|ref|ZP_05171892.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254714082|ref|ZP_05175893.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254716862|ref|ZP_05178673.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|256031577|ref|ZP_05445191.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|260168708|ref|ZP_05755519.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261218663|ref|ZP_05932944.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261314276|ref|ZP_05953473.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261317630|ref|ZP_05956827.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261321839|ref|ZP_05961036.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261752300|ref|ZP_05996009.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261758184|ref|ZP_06001893.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265988665|ref|ZP_06101222.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|25009345|sp|P59078|SYM_BRUSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|23347815|gb|AAN29918.1| methionyl-tRNA synthetase [Brucella suis 1330]
 gi|225617478|gb|EEH14523.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|260923752|gb|EEX90320.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261294529|gb|EEX98025.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261296853|gb|EEY00350.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261303302|gb|EEY06799.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261738168|gb|EEY26164.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
 gi|261742053|gb|EEY29979.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|264660862|gb|EEZ31123.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|16329894|ref|NP_440622.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501028|sp|P73274|SYL_SYNY3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1652380|dbj|BAA17302.1| leucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 869

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 39/143 (27%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
             I     + Y      Y     H+G+ R   + DV+ RL R    +  V +        
Sbjct: 26  TPIASDLPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGYQ--VLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I         T KN  Q      +L  L+   +       P      
Sbjct: 84  LPAENAA------IERGIPPKQWTEKNIAQMRAQLQQLG-LSIDWEREVATCAPDYYRWT 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q         G AY+    + +D
Sbjct: 137 QWLFLEFFQAGLAYQKEATVNWD 159


>gi|294852413|ref|ZP_06793086.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294821002|gb|EFG38001.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 544

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 48  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 99

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 100 LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 158

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 159 RDEAYYGE 166



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 316 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 367

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 368 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 427

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 428 ARKAM-DDQALHLALGAIFAVVAEANR 453


>gi|259502839|ref|ZP_05745741.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
 gi|259169206|gb|EEW53701.1| valine-tRNA ligase [Lactobacillus antri DSM 16041]
          Length = 883

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P D   W++ + +   W S   W     GW    SA    Y      +   G D+IF   
Sbjct: 438 PQDAENWEQDSDVLDTWFSSALWPFSTMGWPDTDSADFKRYFPTNTLV--TGYDIIFFWV 495

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++       + +   
Sbjct: 496 SRMIFQSLEFTGKAPFKNVLLHGLIRDEQGRKMSKSLGNGIDPMDVI-------KKYGVD 548

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+  ++  A   ++K    S 
Sbjct: 549 ALRWFLITGSTPGQDIRFSYTKMDAAWNFINKIWNASR 586


>gi|257885188|ref|ZP_05664841.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257821040|gb|EEV48174.1| isoleucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 932

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 565 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 618 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 677

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|256061087|ref|ZP_05451242.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261325089|ref|ZP_05964286.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261301069|gb|EEY04566.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 515

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|224114922|ref|XP_002332263.1| predicted protein [Populus trichocarpa]
 gi|222832028|gb|EEE70505.1| predicted protein [Populus trichocarpa]
          Length = 320

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 3/111 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++  H   L+ +G KMSKS GN +  + + E        + A V+RL +
Sbjct: 154 SIAIKGKAPYFSVITHGFVLDEKGCKMSKSLGNVVDPHAITERLVMEAPGYGADVLRLWV 213

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSAL-YNDL 359
               Y   +    Q L +   +  K   T       + D    +A+ YNDL
Sbjct: 214 SSVDYTGDVMIGPQVLWQMSDIYRKLRGTLRYLLGNLHDWEADNAISYNDL 264


>gi|205355816|ref|ZP_03222585.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
 gi|205346250|gb|EDZ32884.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8421]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 57/149 (38%), Gaps = 28/149 (18%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNT-----------VSAIQALHKLAR 373
           L +      K   T          +L+ + +  DL               A +   K ++
Sbjct: 653 LKQVGEQYRKIRNTIR-------FLLANINDLKDLEVKEFSFIDKWILSRATKV-FKASK 704

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           E+   ++    F+   + L  ++   +L+
Sbjct: 705 EAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|229581840|ref|YP_002840239.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012556|gb|ACP48317.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
          islandicus Y.N.15.51]
          Length = 934

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  +  DV  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFT 81



 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLKNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
               + +    +R+ +  T    + +DF    +      L K    
Sbjct: 632 ----KEFGVDPVRITLTSTSDLLQDLDFNENLVNPIAEQLKKVYDL 673


>gi|161830331|ref|YP_001596339.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|189082322|sp|A9NBM5|SYI_COXBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161762198|gb|ABX77840.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    DI+  G D      ++ +  S          ++  +   ++ +GRKM
Sbjct: 544 CVLEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVVDSQGRKM 603

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   +++       ++  A V+RL      Y   ++ + + L  A     +  
Sbjct: 604 SKSLGNVILPADVV-------KNLGADVLRLWAASMDYTVEVNVSDEILKRASDAYRRIR 656

Query: 339 QTST 342
            T+ 
Sbjct: 657 NTAR 660


>gi|29653743|ref|NP_819435.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|81629459|sp|Q83EC9|SYI_COXBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29541006|gb|AAO89949.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 493]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    DI+  G D      ++ +  S          ++  +   ++ +GRKM
Sbjct: 544 CVLEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVVDSQGRKM 603

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   +++       ++  A V+RL      Y   ++ + + L  A     +  
Sbjct: 604 SKSLGNVILPADVV-------KNLGADVLRLWAASMDYTVEVNVSDEILKRASDAYRRIR 656

Query: 339 QTST 342
            T+ 
Sbjct: 657 NTAR 660


>gi|322388643|ref|ZP_08062243.1| leucine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140563|gb|EFX36068.1| leucine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 833

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 71/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKEIVAENNGALDKVYNETVKAVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALSDEK 807


>gi|229579473|ref|YP_002837871.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284998118|ref|YP_003419885.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
          [Sulfolobus islandicus L.D.8.5]
 gi|228010187|gb|ACP45949.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
          islandicus Y.G.57.14]
 gi|284446013|gb|ADB87515.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
          [Sulfolobus islandicus L.D.8.5]
          Length = 934

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  +  DV  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFT 81



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLKNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
               + +    +R+ +  T    + +DF    +      L K    
Sbjct: 632 ----KEFGVDPVRITLTSTSDLLQDLDFNENLVNPIAEQLKKVYDL 673


>gi|227830592|ref|YP_002832372.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|227457040|gb|ACP35727.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
          islandicus L.S.2.15]
          Length = 934

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  +  DV  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFT 81



 Score = 37.9 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLKNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
               + +    +R+ +  T    + +DF    +      L K    
Sbjct: 632 ----KEFGVDPVRITLTSTSDLLQDLDFNENLVNPIAEQLKKVYDL 673


>gi|145345247|ref|XP_001417128.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577355|gb|ABO95421.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 949

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 10/108 (9%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF--GGRSWPAPVIRLAM 311
            +        I  H   L+ +G KMSKS GN I    ++E  K       + A  +RL +
Sbjct: 565 ASTGQAPYKKILTHGFVLDEKGYKMSKSLGNVIDPRTVIEGGKNQKTEPGYGADTLRLWV 624

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL 359
             T Y   +   +  + +      K   T           L  + +D 
Sbjct: 625 ASTDYTGDVSIGMNIIKQTSEAYRKLRGTIR--------FLMGVLDDF 664


>gi|91202863|emb|CAJ72502.1| strongly similar to isoleucine tRNA synthetase [Candidatus Kuenenia
           stuttgartiensis]
          Length = 938

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       ++  H   ++  G KMSKS GNFI++ ++L       + + A ++RL  
Sbjct: 583 SVGAWGKAPFKSVLTHGFVVDEMGEKMSKSIGNFISVEDIL-------KEFGADILRLWT 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   +        +   T
Sbjct: 636 SSMDYQHDMGVSRNLINRCSDAYRRIRNT 664


>gi|323477689|gb|ADX82927.1| tRNA synthetase valyl/leucyl anticodon-binding protein
          [Sulfolobus islandicus HVE10/4]
          Length = 934

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  +  DV  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFT 81



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLKNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
               + +    +R+ +  T    + +DF    +      L K    
Sbjct: 632 ----KEFGVDPVRITLTSTSDLLQDLDFNENLINPIAEQLKKVYDL 673


>gi|258615786|ref|ZP_05713556.1| isoleucyl-tRNA synthetase [Enterococcus faecium DO]
          Length = 795

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 71/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +    ++      L+ EGRKMSKS GN I   +++       + + A ++R
Sbjct: 428 ITTSVAINGVAPYKSVISQGFALDGEGRKMSKSLGNIIAPEKVI-------KQFGADILR 480

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN---- 360
           L +    Y   +  ++  L++   +  K   T      +    DP   +  YNDL     
Sbjct: 481 LWVSSVDYEADVRVSMDILSQVAEVYRKIRNTMRFLLANTEDFDPKKDTVSYNDLRSVDK 540

Query: 361 --TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             TV   Q + ++  E    ++ + I+    + L +++   +L+    +  IE 
Sbjct: 541 YMTVRLNQVIKEIREEGYDKYNFMHIYRTVMNFLTVDLSSFYLDFAKDVVYIEA 594


>gi|242780148|ref|XP_002479535.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
            10500]
 gi|218719682|gb|EED19101.1| isoleucyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
            10500]
          Length = 1414

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 54/275 (19%), Positives = 90/275 (32%), Gaps = 56/275 (20%)

Query: 194  WKRSTPMEPGWESPW--GRG----RPG------WH-------------IECSAMSSHYLG 228
            W   +P +P W  P+    G    R G      W              +E    +  YL 
Sbjct: 897  WWTDSPEDPAWIPPFLQQDGSSDYRRGTDTMDVWFDSGTSWTQVENESLEKDRPADIYLE 956

Query: 229  KVFDIHGG---GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
               D H G      L +  H+    +S  +       ++  H   L+ + RKMSKS GN 
Sbjct: 957  GT-DQHRGWFQSSLLTYVAHQVASGKSDASTIKSPFKHLITHGFTLDQDARKMSKSIGNI 1015

Query: 286  ITINELL----------------ETKKFGGRSWP---APVIRLAMLMTHYREPIDFTVQR 326
            I  + ++                + +K  G  +       +RL +  + Y   +    Q 
Sbjct: 1016 IQPDAIMNGTLLPPLKQKKSKGTKEQKVSGPVYDALGPDALRLWVASSDYTRDVVIGQQV 1075

Query: 327  LTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
            L      L K+  T      + G  DP+V    Y DL+ +  +  L +L R      +  
Sbjct: 1076 LQTINTSLHKYRVTFKLLLGALGDFDPSVNLRQYEDLHKIDRLA-LMQLTRLVDTCRNAF 1134

Query: 383  PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
              F     +          N   S    + +++RL
Sbjct: 1135 DSFEFYKAV---NALNRWANHEFSAFYMETLKDRL 1166


>gi|154707562|ref|YP_001425008.1| isoleucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|189082321|sp|A9KEI8|SYI_COXBN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154356848|gb|ABS78310.1| isoleucyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    DI+  G D      ++ +  S          ++  +   ++ +GRKM
Sbjct: 544 CVLEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVVDSQGRKM 603

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   +++       ++  A V+RL      Y   ++ + + L  A     +  
Sbjct: 604 SKSLGNVILPADVV-------KNLGADVLRLWAASMDYTVEVNVSDEILKRASDAYRRIR 656

Query: 339 QTST 342
            T+ 
Sbjct: 657 NTAR 660


>gi|148543739|ref|YP_001271109.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|184153145|ref|YP_001841486.1| valyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
 gi|227363281|ref|ZP_03847413.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|325682111|ref|ZP_08161629.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
 gi|148530773|gb|ABQ82772.1| valyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
 gi|183224489|dbj|BAG25006.1| valyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
 gi|227071737|gb|EEI10028.1| valyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
 gi|324978755|gb|EGC15704.1| valine--tRNA ligase [Lactobacillus reuteri MM4-1A]
          Length = 884

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P D   W++   +   W S   W     GW    SA    Y      +   G D+IF   
Sbjct: 439 PKDAENWEQDKDVLDTWFSSALWPFSTMGWPNTDSADFKRYFPTNTLV--TGYDIIFFWV 496

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++       + +   
Sbjct: 497 SRMIFQSLEFTGRAPFKNVLLHGLIRDEQGRKMSKSLGNGIDPMDVI-------KKYGVD 549

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+  ++  A   ++K    S 
Sbjct: 550 ALRWFLITGSTPGQDIRFSYTKMDAAWNFINKIWNASR 587


>gi|87123001|ref|ZP_01078860.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86161718|gb|EAQ63024.1| isoleucyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 940

 Score = 45.6 bits (107), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +  H   ++ +GRKMSKS GN ++  +++ +         A +IRL +
Sbjct: 579 SIAVRGVAPYKQVLTHGFTVDGDGRKMSKSLGNVLSPQKVMNSLG-------ADIIRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L        +   T+ 
Sbjct: 632 AATDYTTEMTVSDEILKRVADSYRRIRNTAR 662


>gi|323474954|gb|ADX85560.1| tRNA synthetase valyl/leucyl anticodon-binding protein
          [Sulfolobus islandicus REY15A]
          Length = 934

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  +  DV  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFT 81



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLKNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
               + +    +R+ +  T    + +DF    +      L K    
Sbjct: 632 ----KEFGVDPVRITLTSTSDLLQDLDFNENLVNPIAEQLKKVYDL 673


>gi|291277642|ref|YP_003517414.1| isoleucyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964836|emb|CBG40695.1| isoleucyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 918

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 20/166 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC         +I  H   ++ +G K SKS GN I    +L+ +        + ++RL +
Sbjct: 584 SCAILGEAPFKSILTHGFTVDEKGEKQSKSKGNVIPPETILKNQG-------SEILRLWV 636

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV---SAIQAL 368
            M  Y+  +  +   + +      K   T           L A  NDL T+     +  +
Sbjct: 637 AMNDYQSDLRISANIIAQVAEQYKKIRNTLR--------FLLANINDLETLAPKENLSPI 688

Query: 369 HKLARESTKNHDLLPI--FNASAHILGIEVCKEHLNKNISIAIEKL 412
                ++TKN   L    F     + G+++   +++  +S     L
Sbjct: 689 DVWILKTTKNTFSLVQSYFAKYDFVKGLQILMYYISNELSGIYMDL 734


>gi|261403615|ref|YP_003247839.1| isoleucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370608|gb|ACX73357.1| isoleucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 1039

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 7/65 (10%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+ +G KMSKS GN +  ++++E        + A ++R 
Sbjct: 574 ALSEIVFGDVPYKKCLMHGFTLDEKGDKMSKSLGNIVNPDDVVE-------KYGADLLRF 626

Query: 310 AMLMT 314
            +L  
Sbjct: 627 YLLSA 631


>gi|238620094|ref|YP_002914920.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238381164|gb|ACR42252.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
          islandicus M.16.4]
          Length = 934

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  +  DV  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFT 81



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLKNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
               + +    +R+ +  T    + +DF    +      L K    
Sbjct: 632 ----KEFGVDPVRITLTSTSDLLQDLDFNENLVNPIAEQLKKVYDL 673


>gi|27805747|sp|Q9C4B7|SYK_METBA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|13540310|gb|AAK29405.1|AF337056_1 lysyl tRNA Synthetase [Methanosarcina barkeri]
          Length = 537

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 34/99 (34%), Gaps = 15/99 (15%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE------RARQ 85
           G T     HIGN R ++  D +YR L          Y   I D  D + +       +  
Sbjct: 27  GITPSGNIHIGNMREVVTADAVYRALVDKGANADFIY---IADNYDPLRKVYPFLPESYV 83

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLACLA 118
           EH   PI++        +       + F++   RL    
Sbjct: 84  EHVGKPISEIPCPCGNCANYAEHFLKPFLEALRRLGINP 122


>gi|255024564|ref|ZP_05296550.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 219

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +  ++++       +   A ++RL +
Sbjct: 49  AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPSKVI-------KQLGADIVRLWV 101

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 102 ASVDYQADVRVSDEILKQVSEVYRKIRNT 130


>gi|227827868|ref|YP_002829648.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229585136|ref|YP_002843638.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227459664|gb|ACP38350.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
          islandicus M.14.25]
 gi|228020186|gb|ACP55593.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
          islandicus M.16.27]
          Length = 934

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  +  DV  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFT 81



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLKNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
               + +    +R+ +  T    + +DF    +      L K    
Sbjct: 632 ----KEFGVDPVRITLTSTSDLLQDLDFNENLVNPIAEQLKKVYDL 673


>gi|168493951|ref|ZP_02718094.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576165|gb|EDT96693.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 833

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 72/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+                AV   + +   NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIDSLKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVTWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|91227670|ref|ZP_01261947.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188449|gb|EAS74743.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 942

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGQGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|83588921|ref|YP_428930.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83571835|gb|ABC18387.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 651

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 52/157 (33%), Gaps = 39/157 (24%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  IE    ++ H G+L ++G KMSKS GN +    L++        + +  IR  +L  
Sbjct: 276 AAGIEPPRQVFGH-GWLLVDGGKMSKSRGNVVDPMILIDR-------YGSDAIRYFLLRE 327

Query: 314 THYREPIDFTVQRLTE----------------AEILLSKWPQTSTSKGIIDPAVLSAL-- 355
             Y     ++ + L                     ++ K+             +   L  
Sbjct: 328 MPYGADGYYSEEALINRYNTDLANDFGNLLSRTTAMIEKFNGGVIDPPSAPEPLDEELKN 387

Query: 356 ---------YNDLN---TVSAIQALHKLARESTKNHD 380
                     N LN      A+ A+ +L   + K  +
Sbjct: 388 LAAGIPDEVDNALNHYEFARALAAIWRLVNRANKYIE 424



 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 13/132 (9%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           YV  P  Y  D  HIG+A    + D L R  R    +  V ++    +   KI  +AR+ 
Sbjct: 7   YVTTPIYYPSDKLHIGHALTTTMADTLARYKRLRGYD--VYFLTGSDEHGQKIQRKARE- 63

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGH 144
                 N        +    F +   RL         R T   H   +  L+Q I   G 
Sbjct: 64  -----ANLEPIQYVDRIVATFQELWRRLNISYNDF-IRTTEPRHARVVQALLQKIYDQGD 117

Query: 145 AYEANNEIIFDT 156
            Y++  E  + T
Sbjct: 118 IYKSTYEGWYCT 129


>gi|86150842|ref|ZP_01069058.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124548|ref|YP_004066552.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85842012|gb|EAQ59258.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018270|gb|ADT66363.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|313637043|gb|EFS02610.1| isoleucine--tRNA ligase [Listeria seeligeri FSL S4-171]
          Length = 921

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGESPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|269966608|ref|ZP_06180689.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828793|gb|EEZ83046.1| isoleucyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 942

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGQGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|160947754|ref|ZP_02094921.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
 gi|158446888|gb|EDP23883.1| hypothetical protein PEPMIC_01689 [Parvimonas micra ATCC 33270]
          Length = 649

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 61/180 (33%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D       I+ H G++  +  KMSKS GN +    +
Sbjct: 254 DVHLIGKEIMRFHAIIWPAILMALDLPLP-KKIFGH-GWILFDDDKMSKSKGNIVYAEPI 311

Query: 292 LETKKFGGRSWPAPVIRLAMLM----TH-----YREPID-FTVQRLTE-----------A 330
           +E        +    +R  ML            Y + ++      + +            
Sbjct: 312 IER-------YGMDALRYFMLREFTFGQDGNFTYTKMLNRINSDLVNDLGNLVSRSVAMC 364

Query: 331 EILLSKWPQTSTSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARESTKNHD 380
           E     +  + T    +D  ++            L + LN   A++ + KL R + K  D
Sbjct: 365 EKYFDGFVPSQTELTELDNDLIEIATTTRDRVAELMDKLNFSMALEEIWKLVRRTNKYID 424


>gi|153207885|ref|ZP_01946462.1| isoleucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212219167|ref|YP_002305954.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|254782381|sp|B6J9J5|SYI_COXB1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120576311|gb|EAX32935.1| isoleucyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212013429|gb|ACJ20809.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    DI+  G D      ++ +  S          ++  +   ++ +GRKM
Sbjct: 544 CVLEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVVDSQGRKM 603

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   +++       ++  A V+RL      Y   ++ + + L  A     +  
Sbjct: 604 SKSLGNVILPADVV-------KNLGADVLRLWAASMDYTVEVNVSDEILKRASDAYRRIR 656

Query: 339 QTST 342
            T+ 
Sbjct: 657 NTAR 660


>gi|237809689|ref|YP_002894129.1| isoleucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237501950|gb|ACQ94543.1| isoleucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 938

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     +  H   ++  GRKMSKS GN ++  +++           A ++RL +  
Sbjct: 580 AMKHQAPYRQVLTHGFTVDGHGRKMSKSLGNVVSPQDVMNKLG-------ADILRLWVAS 632

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + + L  +     +   T+ 
Sbjct: 633 TDYTGEMTVSDEILKRSADAYRRIRNTAR 661


>gi|315928757|gb|EFV08032.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLKVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|313632514|gb|EFR99522.1| isoleucine--tRNA ligase [Listeria seeligeri FSL N1-067]
          Length = 921

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGESPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|255083528|ref|XP_002504750.1| predicted protein [Micromonas sp. RCC299]
 gi|226520018|gb|ACO66008.1| predicted protein [Micromonas sp. RCC299]
          Length = 954

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 2/89 (2%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF--GGRSWPAPVIRLAM 311
            A        I  H   L+ +G KMSKS GN I    ++E  K      ++ A  +RL +
Sbjct: 580 AAAGKAPYEKILTHGFVLDEKGYKMSKSLGNVIDPRLIIEGGKNQKTEPAFGADTLRLWV 639

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y   +   V  L +      K   T
Sbjct: 640 ASTDYTSDVLIGVNILKQTSDAYRKLRGT 668


>gi|224369583|ref|YP_002603747.1| IleS [Desulfobacterium autotrophicum HRM2]
 gi|223692300|gb|ACN15583.1| IleS [Desulfobacterium autotrophicum HRM2]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 35/85 (41%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                  ++  H   ++ +G+KMSKS GN +   ++++          A ++RL +    
Sbjct: 582 TGKAPYKSVLTHGFVVDSQGKKMSKSVGNVVAPEKIIKAHG-------ADILRLWVASAD 634

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           YR+ +  +   + +      +   T
Sbjct: 635 YRDDVRISDNIVNQLSDAYRRIRNT 659


>gi|212213109|ref|YP_002304045.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|254782382|sp|B6J1S2|SYI_COXB2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|212011519|gb|ACJ18900.1| isoleucyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    DI+  G D      ++ +  S          ++  +   ++ +GRKM
Sbjct: 544 CVLEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVVDSQGRKM 603

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   +++       ++  A V+RL      Y   ++ + + L  A     +  
Sbjct: 604 SKSLGNVILPADVV-------KNLGADVLRLWAASMDYTVEVNVSDEILKRASDAYRRIR 656

Query: 339 QTST 342
            T+ 
Sbjct: 657 NTAR 660


>gi|165918823|ref|ZP_02218909.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|165917455|gb|EDR36059.1| isoleucyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 936

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 7/124 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           C       L    DI+  G D      ++ +  S          ++  +   ++ +GRKM
Sbjct: 544 CVLEKRRELKVPADIYLEGSDQHRGWFQSSLLTSLAIRDKAPYKSVLTYGFVVDSQGRKM 603

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN I   +++       ++  A V+RL      Y   ++ + + L  A     +  
Sbjct: 604 SKSLGNVILPADVV-------KNLGADVLRLWAASMDYTVEVNVSDEILKRASDAYRRIR 656

Query: 339 QTST 342
            T+ 
Sbjct: 657 NTAR 660


>gi|145607167|ref|XP_361568.2| hypothetical protein MGG_04042 [Magnaporthe oryzae 70-15]
 gi|145014765|gb|EDJ99333.1| hypothetical protein MGG_04042 [Magnaporthe oryzae 70-15]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 51/175 (29%), Gaps = 19/175 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + H+G+ R   + DV+ R       +  +       D      E A  E      
Sbjct: 50  PYPSGYLHLGHLRVYTIADVIARFRTLQGNKVMLPMGW---DAFGLPAENAAIER----- 101

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEA 148
               ++ T  N  +  +    +           +   P+     Q     +   G AY+A
Sbjct: 102 GIDPAVWTKSNIARMKEQLDVMNSSW-DWSREISTCDPEFYKHTQKIFLLMHEKGLAYQA 160

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
             E+              +  ++D      R   K  K+    + L K S   EP
Sbjct: 161 EAEVNYDPVDKT----VLANEQVDANGCSWRSGAKVEKRRLRQWFL-KISEFREP 210


>gi|86150493|ref|ZP_01068718.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839088|gb|EAQ56352.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|91776507|ref|YP_546263.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123254071|sp|Q1GZB5|SYL_METFK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91710494|gb|ABE50422.1| leucyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 817

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 68/174 (39%), Gaps = 25/174 (14%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTH 315
             E    + +  G +  +G KMSKS GN +   EL++       ++ A   RL M+    
Sbjct: 557 HDEPFTKL-LTQGMVLKDGSKMSKSKGNTVDPQELID-------NYGADTARLFMMFAAP 608

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA--LYNDLNTVSAIQA----LH 369
             + ++++   +  A   L +      +   ++  +++A  + +     + ++A    LH
Sbjct: 609 PEQSLEWSDAGVEGAHRFLKRVWTAVANH--VESGIVAAFTMGD---LSAELKAFRRQLH 663

Query: 370 KLARESTKNHDLLPIFN-ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
           +   + T ++     FN A A ++ +      +  + +         R   L+ 
Sbjct: 664 QTIEKVTDDYGRRHAFNTAIAAVMELMNAYAKIEGHDATT----RAIRQEALEN 713


>gi|88596807|ref|ZP_01100044.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|88191648|gb|EAQ95620.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           84-25]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLKVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|320353933|ref|YP_004195272.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122435|gb|ADW17981.1| leucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 823

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  NEL+       + + A  +RL  +      
Sbjct: 566 EPFTNL-LTQGMVIKDGAKMSKSKGNVVDPNELI-------QQYGADTVRLFSLFAAPPE 617

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
             +++  Q +  A   L++  +     
Sbjct: 618 RDLEWNAQGVEGASRFLNRVYRLVVQN 644


>gi|315927932|gb|EFV07254.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLKVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|307265681|ref|ZP_07547234.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|326389218|ref|ZP_08210786.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
 gi|306919325|gb|EFN49546.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
 gi|325994581|gb|EGD53005.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
          Length = 633

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 64/180 (35%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D           +G+L LEG KMSKS GN +   EL
Sbjct: 253 DVHLVGKEIMRFHTIIWPAMLMALDL--PLPKKVFGHGWLILEGGKMSKSKGNVVDPKEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK---WP 338
           +       R +    +R  +L    +     F+ + L          +   LLS+     
Sbjct: 311 V-------RKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMI 363

Query: 339 QTSTSKGIIDPAVLSALYNDL-NTV-----------------SAIQALHKLARESTKNHD 380
           +      +  P+    + +DL NT                  +A+  + KL R + K  D
Sbjct: 364 EKYFEGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423



 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 11/122 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG++   +  D + R  R    +  V ++   TD   + I+R  +E    P     
Sbjct: 16  DKLHIGHSYTTVAADAMARFKRLTGYD--VKFLTG-TDEHGQKIQRIAREKGMSPKEYVD 72

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLI-QNIILHGHAYEANNEIIF 154
            I+  +  +   K              R T+ +  +++  I   +   G  Y++  E  +
Sbjct: 73  GIV--EWIKDLWKTMDISN----DQFIRTTDKYHEEIVQKIFTKLYEKGDIYKSEYEGWY 126

Query: 155 DT 156
            T
Sbjct: 127 CT 128


>gi|88813005|ref|ZP_01128248.1| Isoleucyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
 gi|88789783|gb|EAR20907.1| Isoleucyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
          Length = 940

 Score = 45.6 bits (107), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN +    +++T         A V+RL +  T YR  +  + + 
Sbjct: 593 HGFTVDEQGRKMSKSRGNVVAPQTVMKTLG-------ADVLRLWVAATDYRGEMAVSDEI 645

Query: 327 LTEAEILLSKWPQTST 342
           L        +   T+ 
Sbjct: 646 LKRTADAYRRIRNTAR 661


>gi|289435362|ref|YP_003465234.1| hypothetical protein lse_2001 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171606|emb|CBH28152.1| ileS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 921

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGESPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|258405242|ref|YP_003197984.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797469|gb|ACV68406.1| isoleucyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 938

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 49/123 (39%), Gaps = 15/123 (12%)

Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           EC   +  YL    D H G        H + +A S           +  H   ++ +GRK
Sbjct: 556 ECRYPADLYLEGT-DQHRGWF------HSSLLA-SVGTRDQAPYKTVLTHGFVVDGQGRK 607

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN +   E+++        + A ++R+ +   +Y+E +  +   L +      + 
Sbjct: 608 MSKSIGNVVAPQEIMD-------KYGAEILRMWVASENYQEDLRISENILKQLVDAYRRI 660

Query: 338 PQT 340
             T
Sbjct: 661 RNT 663


>gi|148926033|ref|ZP_01809719.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
 gi|145845512|gb|EDK22604.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           CG8486]
          Length = 920

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 603 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 655

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 656 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 706

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 707 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 736


>gi|294101689|ref|YP_003553547.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293616669|gb|ADE56823.1| leucyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 828

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 16/132 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A     +  E  +N+ +  G +  +G KMSKS G
Sbjct: 530 PVDQYIGGIEHACMHLIYSRFFTKVFADLGLCNAREPFSNL-LTQGMVIKDGAKMSKSLG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++       + + A   RL +L        ++++ Q +      L++ W    
Sbjct: 589 NVVDPDEII-------QKFGADTARLFILFAAPPGNDLEWSEQGVEGVHRFLNRVWRYIE 641

Query: 342 TSKGIIDPAVLS 353
            +   +  A + 
Sbjct: 642 ENLEGLKNASME 653



 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 37/137 (27%), Gaps = 15/137 (10%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DPS  + Y     P      H+G+ R   + D++ R L  +     V +           
Sbjct: 27  DPSKKKFYCLEMFPYPSGALHMGHLRNYSIGDMMARFL--WMNGYNVLHPMGFDAFGLPA 84

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A +              T KN +Q      R+ C       R     P      Q  
Sbjct: 85  ENAALKYGVQAH------EWTHKNIEQMTDQLKRMGCSY-DWDRRVETCNPDYYRWTQWI 137

Query: 138 --NIILHGHAYEANNEI 152
                  G AY     +
Sbjct: 138 FLQFFKKGLAYRKKAPV 154


>gi|284926291|gb|ADC28643.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 915

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|162456364|ref|YP_001618731.1| hypothetical protein sce8081 [Sorangium cellulosum 'So ce 56']
 gi|161166946|emb|CAN98251.1| metG3 [Sorangium cellulosum 'So ce 56']
          Length = 640

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTV 324
           +    L + G KMSKS GNF T ++LL+      + + A  IR  + L+    +P +F  
Sbjct: 423 LGCFHLLVGGDKMSKSRGNFFTADQLLD-----EKGYSADQIRYYLALLGLAEKPSNFDF 477

Query: 325 QRLTEAEILLS 335
           ++L E    L+
Sbjct: 478 EKLDERNRFLA 488


>gi|118576440|ref|YP_876183.1| leucyl-tRNA synthetase [Cenarchaeum symbiosum A]
 gi|118194961|gb|ABK77879.1| leucyl-tRNA synthetase [Cenarchaeum symbiosum A]
          Length = 578

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 16/100 (16%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +         +      + NG + ++G+KMSKS GN + + + +   
Sbjct: 205 SGRDLVPNHLSFFVLNHVAIFPEKHWPRKIVVNGSVLMDGKKMSKSMGNIVLLRKAIAEH 264

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
                   A  IRLA++          + + L +A+  L 
Sbjct: 265 G-------ADPIRLAII---------ISTELLQDADFNLE 288


>gi|91790434|ref|YP_551386.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|123355109|sp|Q122Q4|SYL_POLSJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91699659|gb|ABE46488.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 886

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           Y C    Y     H+G+ R   + D+L R LR       +          D     A  E
Sbjct: 40  YACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMKGYNVLMPMGW------DAFGLPA--E 91

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILH 142
           + ++      +  T  N     K    +  LA           P      Q     ++  
Sbjct: 92  NAAMKNGVPPAQWTYDNIAYMKKQMQAMG-LAIDWSREVATCDPSYYKWNQWLFLKMLEK 150

Query: 143 GHAYEANNEIIFD 155
           G AY     + +D
Sbjct: 151 GIAYRKTQVVNWD 163


>gi|86152539|ref|ZP_01070744.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|85843424|gb|EAQ60634.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           HB93-13]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLKVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|75759956|ref|ZP_00740025.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218899626|ref|YP_002448037.1| valyl-tRNA synthetase [Bacillus cereus G9842]
 gi|74492553|gb|EAO55700.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|218541207|gb|ACK93601.1| valyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 881

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|283956457|ref|ZP_06373937.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283792177|gb|EFC30966.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|242281146|ref|YP_002993275.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511640|sp|C6BU27|SYR_DESAD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|242124040|gb|ACS81736.1| arginyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 547

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 58/352 (16%), Positives = 106/352 (30%), Gaps = 53/352 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D L R+L +   +    Y  N       I+  +         
Sbjct: 126 PT--GPLHIGHGRGAALGDCLVRILEFTGYDVEAEYYVNDAGRQMLILGTSIWVRLQQSQ 183

Query: 93  NDAISIITSKNTQQFVKDTTR---------LACLAPTHQPRATNHI-PQMIYLIQNIILH 142
              I+        +++KD            L             +   +++  I+  +  
Sbjct: 184 GRDIADPEDFYKGEYIKDLAAEVLERNPGILDMSDDEAIAICREYGKDEILEGIKKDLA- 242

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
             A++  +++ F   S+           D +  G    E        D  LW +ST +  
Sbjct: 243 --AFDVRHDVWFSEKSLVTANKVEETFADLKARGMAYEE--------DGALWFKSTELGD 292

Query: 203 GWESPWGR--GRPGWHIECSAMSSHYLGKVFDIHGG--GLDLIFPHHENEIAQSCCADRI 258
             +    +  G   +     A       + FDI     G D    H      Q+      
Sbjct: 293 DKDRVLRKSNGDLTYFASDIAYHDDKYKRGFDIVVDIWGADH---HGYIPRMQAAVEALG 349

Query: 259 EKTANIWIHNGFLNL----EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +K     I    +NL    E   MS   G F T+ +++               R   L  
Sbjct: 350 KKGQLDVILVQLVNLLRGGEQIAMSTRAGKFETLEDVVNEVGRDAS-------RFMFLSR 402

Query: 315 HYREPIDFTVQRLTE------------AEILLSKWPQTSTSKGIIDPAVLSA 354
                +DF ++ + +            A   +    + +  +GI  PA+ +A
Sbjct: 403 KSDSHLDFDLELVKQKTMDNPVYYVQYAHARICSVMRKAADQGIAVPAIDAA 454


>gi|157415322|ref|YP_001482578.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386286|gb|ABV52601.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747963|gb|ADN91233.1| Isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
 gi|315932197|gb|EFV11140.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
          Length = 917

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|73671043|ref|YP_307058.1| isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|121725567|sp|Q465G4|SYI_METBF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7648799|gb|AAF65673.1|AF208389_1 isoleucyl-tRNA synthetase [Methanosarcina barkeri]
 gi|72398205|gb|AAZ72478.1| Isoleucyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 1058

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 28/201 (13%), Positives = 73/201 (36%), Gaps = 40/201 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++ +H   L+  G+KMSKS GN ++  ++++        + A  +R  +
Sbjct: 571 SMVGFGRAPYKSVLMHGFTLDAGGKKMSKSLGNVVSPIDVID-------KYGADTLRAYV 623

Query: 312 LMTHYREPID---FTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTV 362
           L +    P D   F  + +      ++      ++P    +    DP             
Sbjct: 624 LSSS--APWDDLKFNQEEVENVHRSINILWNVFRFPLPYMALDNFDP------------- 668

Query: 363 SAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQER 416
             ++      +++ +  D      +  +  A    +      + + + +   +E L +  
Sbjct: 669 --LKVSLDSVKDALREEDRWILSRIQSVVKAVDEAMSGYFLHKAVREILEFTLEDLSRWY 726

Query: 417 LILLKMKKFSSADYIRKQLES 437
           + L++ + ++ AD    +L +
Sbjct: 727 IQLIRPRTWTEADD-PDKLAA 746


>gi|312113630|ref|YP_004011226.1| isoleucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
 gi|311218759|gb|ADP70127.1| isoleucyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
          Length = 1039

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H    + +GRKMSKS GN +   +++       +   A ++RL  
Sbjct: 684 SCGTRGRAPFDTVLTHGFVNDEQGRKMSKSLGNTVAPQDII-------KQSGADILRLWA 736

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L + Y E +    Q +  A     K   T
Sbjct: 737 LSSDYTEDLRIGPQIIQSAVDAYRKLRNT 765


>gi|262395188|ref|YP_003287042.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262338782|gb|ACY52577.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 942

 Score = 45.6 bits (107), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGQGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   TS 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTSR 665


>gi|315924479|ref|ZP_07920700.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622183|gb|EFV02143.1| valine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 49/114 (42%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I     A      ++++IH    + +GRKMSKS GN I   E+
Sbjct: 481 DVLVTGYDIIFFWVARMIFMGIDAMGEVPFSDVYIHGLIRDAQGRKMSKSLGNGIDPLEV 540

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTEAEILLSKWPQTST 342
           +E        + A  +R A++  +       I +T  ++  +   L+K    S 
Sbjct: 541 IED-------YSADALRFAIITGN--SAGNDIRWTQDKIESSRNFLNKIWNASR 585


>gi|304316679|ref|YP_003851824.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778181|gb|ADL68740.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 927

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 25/133 (18%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +    N+  H   ++ EGRKMSKS GN I   +++       + + A ++RL  
Sbjct: 575 SVATRGMAPYKNVLTHGFVVDGEGRKMSKSLGNGIDPADVV-------KEYGADILRLWT 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           +   +   +  + + L +      K   T+         +LS LY+              
Sbjct: 628 VSADFTSDMRISKEILKQMTESYRKIRNTA-------KFLLSNLYD-----------FDA 669

Query: 372 ARESTKNHDLLPI 384
            +++    +LL I
Sbjct: 670 DKDALPYEELLDI 682


>gi|228910293|ref|ZP_04074110.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228849353|gb|EEM94190.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 867

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|228902987|ref|ZP_04067127.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228967560|ref|ZP_04128586.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228792139|gb|EEM39715.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228856663|gb|EEN01183.1| Valyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 867

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|158320039|ref|YP_001512546.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|187645698|sp|A8MG12|SYM1_ALKOO RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|158140238|gb|ABW18550.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 540

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 13/127 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  DV+ R  R     + V YV         I  RA+
Sbjct: 2   NIFIGGAWPYANGSLHLGHVAALLPGDVMARYFRAKG--ENVLYVSGSDCHGTPISIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILH 142
            E      N +   I  +  ++F      L      +  R  +  H  ++  +I+ +  +
Sbjct: 60  NE------NVSPQEIAEQYHKEFKYCFEELGFSY-DYYSRTDDAYHKEEVQRIIKLLYEN 112

Query: 143 GHAYEAN 149
              YE  
Sbjct: 113 EFIYEKE 119



 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 66/179 (36%), Gaps = 45/179 (25%)

Query: 233 IHGGG----LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           IHG        LIFP   N I         +K  +  I + ++ LEG+K+S SN   + +
Sbjct: 286 IHGKDNIPFHSLIFPALLNGI-------GYKKMPDRIISSEYITLEGKKISTSNNWAVWV 338

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMT---------HYREPIDFTVQRLTEAEILL----- 334
            +++E        +    IR  +L            +RE I+     L  A   L     
Sbjct: 339 PDMIER-------YNVDSIRYFLLANGPEKRDADFSWREFINSNNGELLGAYGNLVNRTF 391

Query: 335 ---SKWPQTSTSKGIIDPAVLSA---LYNDL-------NTVSAIQALHKLARESTKNHD 380
               K+   +   G ++  +  A   LY+++       N   A++ + +  R   K  D
Sbjct: 392 VFVKKYFNNTIPVGKLEEEIERATEKLYDEVGKSIESGNLRLALEQIFQFIRSINKYFD 450


>gi|254230241|ref|ZP_04923632.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937221|gb|EDN56088.1| isoleucyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 628

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 240 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGQGRKMSKSIG 299

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   TS 
Sbjct: 300 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTSR 351


>gi|262163906|ref|ZP_06031645.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM223]
 gi|262027434|gb|EEY46100.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM223]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|258620350|ref|ZP_05715388.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|262172241|ref|ZP_06039919.1| isoleucyl-tRNA synthetase [Vibrio mimicus MB-451]
 gi|258587229|gb|EEW11940.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM573]
 gi|261893317|gb|EEY39303.1| isoleucyl-tRNA synthetase [Vibrio mimicus MB-451]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|302388627|ref|YP_003824448.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
 gi|302199255|gb|ADL06825.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
          Length = 644

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D L R  R    +   T+    TD   + I +A Q++      +
Sbjct: 15  VNAQPHIGHAYTTIVADFLARWHRLAGYD---TFFLTGTDEHGEKIAQAAQKN-----GE 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +   +L C+      R T+  H   + Y++Q +   G  Y    E 
Sbjct: 67  EPQAFVDRVSARFREAWEKL-CIEYDDFIRTTDERHKKVVQYVLQKVYDAGDIYYGEYEG 125

Query: 153 IFDT 156
           ++  
Sbjct: 126 LYCV 129


>gi|262401619|ref|ZP_06078185.1| isoleucyl-tRNA synthetase [Vibrio sp. RC586]
 gi|262352036|gb|EEZ01166.1| isoleucyl-tRNA synthetase [Vibrio sp. RC586]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|261250335|ref|ZP_05942911.1| isoleucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260939451|gb|EEX95437.1| isoleucyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 945

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 557 EEYNGASADLYLEGSDQHRGWFQSSLISSIAMKGEAPYKQVLTHGFVVDGHGRKMSKSIG 616

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 617 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 668


>gi|258624722|ref|ZP_05719656.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM603]
 gi|258583009|gb|EEW07824.1| isoleucyl-tRNA synthetase [Vibrio mimicus VM603]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|153215118|ref|ZP_01949825.1| isoleucyl-tRNA synthetase [Vibrio cholerae 1587]
 gi|124114909|gb|EAY33729.1| isoleucyl-tRNA synthetase [Vibrio cholerae 1587]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|83943971|ref|ZP_00956428.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
 gi|83845218|gb|EAP83098.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. EE-36]
          Length = 971

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 26/184 (14%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 625 QSVGTTGRAPYRNVVTHGFTLDEKGMKMSKSIGNTIVPEKVV-------QQYGADILRLW 677

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI----- 365
           +  T Y        + L        +   T             A   D    + +     
Sbjct: 678 VAQTDYTADQRIGPEILKGTADSYRRLRNTMRYMLGALSDFTDADRTD---PAEMPELER 734

Query: 366 ------QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI---EKLVQER 416
                   L ++ RE    +D   +F A      +++   + +          + L   R
Sbjct: 735 WVLHRVAELDQIVREGYARYDFQGVFQAVFTFATVDLSAFYFDVRKDALYCDGDTL--RR 792

Query: 417 LILL 420
               
Sbjct: 793 RAAR 796


>gi|226225924|ref|YP_002760030.1| leucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226089115|dbj|BAH37560.1| leucyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 811

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 12/102 (11%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHY 316
            E       H G +  EG KMSKS GN I  ++ +E        W A   R+ ++ +  Y
Sbjct: 572 EEPFTRFRAH-GMIIREGAKMSKSKGNVINPDQYME-------EWGADAFRMYLMFLGPY 623

Query: 317 REPIDFTVQRLTEAEILLSKW---PQTSTSKGIIDPAVLSAL 355
            E  DF  Q ++     L +     + +   G  DP V+  L
Sbjct: 624 EEGGDFRDQGISGVRRFLDRLWASVRDAVRDGSPDPDVIRKL 665


>gi|328875644|gb|EGG24008.1| isoleucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1038

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 10/169 (5%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S CA  I    N+  H   L+ +G KMSKS GN +  N +
Sbjct: 632 DIYLEGSDQHRGWFQSSLLTSVCARGIAPYRNVVTHGFLLDEKGMKMSKSLGNTMAPNLI 691

Query: 292 LETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKG 345
           +          ++   ++R+ +  + Y   I      L +    + K   T      S  
Sbjct: 692 VSGGPNKTENPAYGVDMLRMWVASSDYSRDISIGPNILIKLLENIKKIRNTVKFMLGSNF 751

Query: 346 IIDPAVLSALYN---DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
             +P +    YN   DL+   A+  +  L + ++K +D      A   +
Sbjct: 752 DFNPELNQIDYNQLSDLDKF-ALHKVFLLEQNASKYYDQFQYSKAMQEL 799


>gi|290579735|ref|YP_003484127.1| putative leucyl-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254996634|dbj|BAH87235.1| putative leucyl-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVIE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +        + + G +D             L A+    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKEIAAKNNGHLDKVYNEVVKTVTEHLEAMR--FNT--AISQLMIFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EEQL 721


>gi|295672620|ref|XP_002796856.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226282228|gb|EEH37794.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 576

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 12/147 (8%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                    YV  P  Y     HIG+   MI+ DVL R              + +T  D+
Sbjct: 46  PQVGDKKPFYVTTPIFYVNAAPHIGHLYTMILGDVLKRWQILLGNTD----AKLLTGTDE 101

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYL 135
             ++    +  +     A   +  +N Q F      +      H  R T+  H   + + 
Sbjct: 102 HGLK---IQQAAAVAGMAPQELCDQNCQTFKNLARTVNVEN-DHFIRTTDPQHKDAVRHF 157

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNY 162
              +   G+ Y A +E  +  S    Y
Sbjct: 158 WDMLNHRGYIYTAKHEGWYSVSDEAFY 184


>gi|15920845|ref|NP_376514.1| leucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|48428671|sp|Q974N4|SYL1_SULTO RecName: Full=Leucyl-tRNA synthetase 1; AltName:
          Full=Leucine--tRNA ligase 1; Short=LeuRS 1
 gi|15621629|dbj|BAB65623.1| 945aa long hypothetical leucyl-tRNA synthetase [Sulfolobus
          tokodaii str. 7]
          Length = 945

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      HIG+ R  I  D+  R LR         +    T
Sbjct: 42 PYTNSPLHIGHGRTYITADIYARYLRMKGYNVLFPFAFQFT 82



 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    +         +      + NGF+ + G+KMSKS GN   +N  ++  
Sbjct: 584 SGRDLIQNHLPYYLFHHFAIFGEKFLPRQIVTNGFIRVGGKKMSKSFGNIYPLNRAID-- 641

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 +    +R+A+  T
Sbjct: 642 -----EYGVETVRIALTST 655


>gi|332018089|gb|EGI58703.1| Methionyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 547

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    ++ D + R           T+    TD     I+ A               
Sbjct: 34  PHIGHLYSAVLADAIVRYNNMLG---HQTFFTTGTDEHGNKIKAAAA-----TAGVPNLE 85

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
             ++ +QQF +   +      +   R T   H   + +  + +   GH Y       +  
Sbjct: 86  YCTRISQQFREMCDKFEVDY-SRFIRTTEKQHCDAVYHFWKQLEERGHIYLGKYSGWYCV 144

Query: 157 S 157
           S
Sbjct: 145 S 145


>gi|268610250|ref|ZP_06143977.1| methionyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 661

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 11/115 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    +  D + R  R    +     V  +T  D+  ++    E  +         
Sbjct: 19  PHIGHCYTTVACDSIARYKRMQGYD-----VMFLTGTDEHGLK---IEQKAAEQGVTPKE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNE 151
                  +F      +         R T+  H+  +  + + +   G+ Y+    
Sbjct: 71  YVDVIVDRFKNLWKYMNISY-DRYIRTTDDYHVEAVQKIFKALYDKGYIYKGEYS 124


>gi|330501955|ref|YP_004378824.1| isoleucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328916241|gb|AEB57072.1| isoleucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 944

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 17/128 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +GRK SKS GN +   +++++         A ++RL + 
Sbjct: 585 CAIDGHAPYKELLTHGFTVDEQGRKQSKSLGNVVAPQKVIDSMG-------ADILRLWVA 637

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQAL 368
            T Y   +  + Q L  +     +   T+     +    DPA       DL   + +  L
Sbjct: 638 STDYSGEMAVSDQILQRSADAYRRIRNTARFMLANLNGFDPAR------DLLQPAQMLDL 691

Query: 369 HKLAREST 376
            + A ++T
Sbjct: 692 DRWALDAT 699


>gi|325959090|ref|YP_004290556.1| methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330522|gb|ADZ09584.1| Methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 658

 Score = 45.2 bits (106), Expect = 0.020,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 36/123 (29%), Gaps = 17/123 (13%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+ R   I  D+  R  R       V +V    +    I  +A +E 
Sbjct: 12  YANGP-----CHLGHLRSTYIPADIYARYNRMKG--NDVLFVCATDEHGTPIAVKAEKE- 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHA 145
                      +  +  +    D       +     R T+  H          +   G+ 
Sbjct: 64  -----GKPPKEVAGRYHEMIKTDLESCNI-SLDSFTRTTDPKHYEISQNFFLKLYEKGYI 117

Query: 146 YEA 148
           YE 
Sbjct: 118 YEK 120


>gi|239916022|gb|ACS34699.1| MIP10137p [Drosophila melanogaster]
          Length = 946

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  
Sbjct: 608 MSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGTDALRWW 660

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   L K   T
Sbjct: 661 VASHGTQHM--SITVSDKLLQQAAENLCKIRGT 691


>gi|229163414|ref|ZP_04291365.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228619983|gb|EEK76858.1| Valyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 867

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPDEDSADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|303290709|ref|XP_003064641.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226453667|gb|EEH50975.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 977

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 2/89 (2%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRLAM 311
            A        I  H   L+ +G KMSKS GN I    ++E  K   +  ++ A  +RL +
Sbjct: 582 AAAGQAPYKTILTHGFVLDEKGYKMSKSLGNVIDPRLVIEGGKNQKQDPAFGADTLRLWV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y   +   +  L +      K   T
Sbjct: 642 ASTDYTSDVLIGMNVLKQTSDAYRKLRGT 670


>gi|197122949|ref|YP_002134900.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196172798|gb|ACG73771.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 694

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 60/157 (38%), Gaps = 38/157 (24%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA---- 310
           A  +++   + +H G L + G KMSKS G F+T    LE+           ++R      
Sbjct: 320 ATGLKRPDRMPVH-GHLTVNGEKMSKSRGTFVTGRTYLES------GLDPELLRYFYAAN 372

Query: 311 MLMTHYREPIDFTVQRLTE----------------AEILLSKWPQTSTSKGIIDPAVLSA 354
           +        +D ++                        LL + P   T+   +DP + +A
Sbjct: 373 LGSGV--SDLDLSLDEFRNRINADLANNVANLASRVAALLQRLPGGVTAP--LDPEIAAA 428

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                 T  A++   + A ++ +  D++ + + +A +
Sbjct: 429 ------TREAVKGA-RAAYQALETRDVVRLVSQAASV 458


>gi|113475381|ref|YP_721442.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|122964993|sp|Q114V5|SYL_TRIEI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110166429|gb|ABG50969.1| leucyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 929

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 53/174 (30%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
             I+ +  + Y      Y     H+G+ R   + DV+ RL R       V +        
Sbjct: 26  TPINNNQPKFYALSMFPYPSGNLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   RL       +  AT   P+     
Sbjct: 84  LPAENAA------IDRGIPPAKWTLENIAQMKEQLRRLGFSIDWDKEVAT-CTPEYYRWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+  + + +D          +  ++D +    R   K  +K
Sbjct: 137 QWIFLQFFQAGLAYQKESAVNWDPIDQT---VLANEQVDGEGRSWRSGAKVERK 187


>gi|294633396|ref|ZP_06711955.1| translation initiation factor IF-2 [Streptomyces sp. e14]
 gi|292831177|gb|EFF89527.1| translation initiation factor IF-2 [Streptomyces sp. e14]
          Length = 416

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---------YNDLNTVSAIQ 366
           Y  P D T + L +A   L++W     +        L A           +DL+T + + 
Sbjct: 319 YARPADLTGRTLDDARATLARWRARVAAWADAPSRPLHADTVRRLGAAYDDDLDTPAVLD 378

Query: 367 ALHKLARE-STKNHDLLPIFNASAHILGIEVCKE 399
           AL +L  E    +      F  +  +L +E+ ++
Sbjct: 379 ALRRLEDEPDVPDGTRFETFVYADRVLALELPRD 412


>gi|261212209|ref|ZP_05926495.1| isoleucyl-tRNA synthetase [Vibrio sp. RC341]
 gi|260838817|gb|EEX65468.1| isoleucyl-tRNA synthetase [Vibrio sp. RC341]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVSPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|332295077|ref|YP_004437000.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332178180|gb|AEE13869.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 508

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 37/124 (29%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R     K V ++    +   KI + A           
Sbjct: 14  VNDKPHIGHAYTTVACDVLARFRRLQG--KDVFFLTGTDEHGRKIQKAAENNS------S 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  +  + F      L         R T   H   +    Q +  +G  Y+     
Sbjct: 66  DAKSYVDRFAKIFQDAWLALNISNDDF-IRTTQERHYKAVAKFWQIVNDNGDIYKGKYSG 124

Query: 153 IFDT 156
            +  
Sbjct: 125 WYCV 128


>gi|317490262|ref|ZP_07948750.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
 gi|316910756|gb|EFV32377.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
          Length = 529

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 43/147 (29%), Gaps = 14/147 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I  D + R  R    +     V  +T +D+   + A           
Sbjct: 15  VNAAPHLGTAYTTIAADTVARYQRMNGYD-----VAFVTGMDEHGQKVADTAA---DKGM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                       F      L     T   R T   H   +    Q++   G  Y+ + E 
Sbjct: 67  TPQDWCDSMEPAFRDAWDMLGITY-TDFVRTTEPRHARTVQKFWQDLYDRGWCYKGSYEG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            +       Y   +   +++ + G  V
Sbjct: 126 WYCVHEETYY---AESDLEKNEDGELV 149


>gi|296877210|ref|ZP_06901250.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431730|gb|EFH17537.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--VALADEK 807


>gi|239906853|ref|YP_002953594.1| isoleucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
 gi|239796719|dbj|BAH75708.1| isoleucyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
          Length = 940

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/84 (23%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +     +  H   ++ EGRKMSKS GN +   E+++          A ++RL      Y
Sbjct: 589 GVAPYKQVLTHGYVVDGEGRKMSKSLGNGMEPQEIIDKHG-------AEILRLWTSAVDY 641

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+ I  + + L        +   T
Sbjct: 642 RDDIRISEEILARLVEAYRRIRNT 665


>gi|225856014|ref|YP_002737525.1| leucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782840|sp|C1CID7|SYL_STRZP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225726165|gb|ACO22017.1| leucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK II  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEIIAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|254455929|ref|ZP_05069358.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207082931|gb|EDZ60357.1| leucyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 845

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 42/148 (28%), Gaps = 19/148 (12%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           L++   +F  ++     M+   P      H+G+ R   + DVL R          V +  
Sbjct: 27  LDKSKKKFYCLE-----MF---PYPSGKIHMGHVRNYTIGDVLARYKSLQGYN--VLHPM 76

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                       ARQ       N +    T  N         RL       +  +T  + 
Sbjct: 77  GWDSFGMPAENAARQN------NLSPKDWTESNISNMKSQLKRLGLSIDWDREISTCSVD 130

Query: 131 ---QMIYLIQNIILHGHAYEANNEIIFD 155
                      +   G  Y    ++ +D
Sbjct: 131 YYKHQQEFFLELYDKGLVYRKEQDVNWD 158


>gi|148996678|ref|ZP_01824396.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168576317|ref|ZP_02722200.1| leucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307066932|ref|YP_003875898.1| leucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147757253|gb|EDK64292.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577874|gb|EDT98402.1| leucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408469|gb|ADM83896.1| Leucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|150020161|ref|YP_001305515.1| leucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|172048661|sp|A6LJM9|SYL_THEM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149792682|gb|ABR30130.1| leucyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 823

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N++   G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAVLHLLYSRFITKVLYDLGYLKFEEPFENLFT-QGMIYKDGWKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           N ++ +E++E        + A  +R   + M    +  +++   +      L + 
Sbjct: 587 NVVSPDEMIE-------KYGADTLRTYILFMAPPEKDAEWSDAGIEGVNRFLKRL 634


>gi|319404210|emb|CBI77803.1| Methionyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 513

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   IV D L R  +           +N+  +        + +  +  +N 
Sbjct: 14  PNSAPHIGHAYNAIVSDTLARFQKADG--------KNVFFLSGTDEHGLKMQQTAEMLNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N+  F K    L C       R T   H      L + +   G  Y      
Sbjct: 66  TPQQLADRNSAVFQKMLAVLNCSNNDF-IRTTEERHHKACQELWKKMEAKGDIYLGCYAG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYSVRQESYY 134


>gi|315585808|gb|ADU40189.1| isoleucine--tRNA ligase [Helicobacter pylori 35A]
          Length = 920

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y GK      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGKKGQSPSDVVLEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN +++++LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDKLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|257417812|ref|ZP_05594806.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|257159640|gb|EEU89600.1| valyl-tRNA synthetase [Enterococcus faecalis T11]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPNEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|239616428|ref|YP_002939750.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505259|gb|ACR78746.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 639

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 54/136 (39%), Gaps = 13/136 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + YV  P  Y     HIG+A   IV D++ R  R    +  V ++    +   K+++ 
Sbjct: 2   KPKFYVTTPIYYINSEPHIGSAYTTIVADIVARYKRLSGYD--VFFLTGTDEHGQKVLQA 59

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
           A++E      N      + +  ++F      L      +  R T+  H+  +   ++ ++
Sbjct: 60  AKEE------NLDPQTYSDQLAEKFKVLWKELQITN-DYFVRTTDERHMKTVQLFVKKML 112

Query: 141 LHGHAYEANNEIIFDT 156
            +G  Y+   E  +  
Sbjct: 113 ENGDVYKGKYEGWYCV 128



 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 67/182 (36%), Gaps = 45/182 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPID 321
            I+ H G+L + G+K+SKS GN I   E +       +++    +R  +L    +    D
Sbjct: 283 QIYAH-GWLTVNGQKISKSLGNAIDPREFV-------KAYGNDAVRYYLLRDIQFGRDGD 334

Query: 322 FTVQR----------------LTEAEILLSKWPQTSTSKGIIDPAVLSALY--------- 356
           F+ +                 L     ++ K+      K  +   V + LY         
Sbjct: 335 FSEENLVHRINADLANDLGNLLHRTVAMIEKFNNGIVPKKGVVEDVDNQLYGLAEEVIAE 394

Query: 357 -----NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-EHLNKNISIAIE 410
                ++L    ++ A+ + AR   K  DL   +      LG +  K E LN  +   ++
Sbjct: 395 YIDHMDNLRFTPSLDAIWRFARFGNKYIDLTEPWK-----LGKDPEKAERLNTVLYNLVD 449

Query: 411 KL 412
            L
Sbjct: 450 TL 451


>gi|332981108|ref|YP_004462549.1| methionyl-tRNA synthetase [Mahella australiensis 50-1 BON]
 gi|332698786|gb|AEE95727.1| methionyl-tRNA synthetase [Mahella australiensis 50-1 BON]
          Length = 512

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A       +E    ++ H G+L ++G KMSKS GN I   +L
Sbjct: 256 DVHLVGKEIVRFHTIIWPAILMAL-GLELPKQVFGH-GWLVMDGGKMSKSKGNVIDPLKL 313

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE----------------AEILL 334
           +E        +    +R  +L    +    +F+ + L                     ++
Sbjct: 314 VE-------QYGVDAVRYFLLREVPFGADGNFSNEALVNRINSDLANDLGNLVSRTVAMV 366

Query: 335 SKW--------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
            K+                   S  +  P  +  L + L   +A+  +  L   S K  D
Sbjct: 367 EKYFGGVLPVPSTAQSMDDGLKSMALSTPKKMEELMDKLQFSNALSEIWALVARSNKYID 426


>gi|323465238|gb|ADX77391.1| arginyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 552

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 42/169 (24%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIER----- 82
           PT     HIG+AR   V D L  +L     +    Y  N     IT++   I  R     
Sbjct: 132 PT--GDLHIGHARNAAVGDTLCNILDAAGYDVTREYYINDAGNQITNLAKSIEARYLQHL 189

Query: 83  -----------------------ARQEHPSIPINDAISIITSKNT------QQFVKDTTR 113
                                  A+++   + ++D   + T +         +  +D   
Sbjct: 190 GQKAEMPADGYHGQDIKNIGADLAKKQPNLMDLSDDERLKTFRQLGVDYEMAKLKQDLAD 249

Query: 114 LACLAPTHQPRATNHI-PQMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
                       + +   ++  +++ +  +G+ YE +      T+   +
Sbjct: 250 FNIHFDNWFSETSLYEKGEIKAVLERMKENGYTYEQDGATWLRTTDFKD 298


>gi|319891595|ref|YP_004148470.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317161291|gb|ADV04834.1| Arginyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 552

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 25/169 (14%), Positives = 53/169 (31%), Gaps = 42/169 (24%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIER----- 82
           PT     HIG+AR   V D L  +L     +    Y  N     IT++   I  R     
Sbjct: 132 PT--GDLHIGHARNAAVGDTLCNILDAAGYDVTREYYINDAGNQITNLAKSIEARYLQHL 189

Query: 83  -----------------------ARQEHPSIPINDAISIITSKNT------QQFVKDTTR 113
                                  A+++   + ++D   + T +         +  +D   
Sbjct: 190 GQKAEMPADGYHGQDIKNIGADLAKKQPNLMDLSDDERLKTFRQLGVDYEMAKLKQDLAD 249

Query: 114 LACLAPTHQPRATNHI-PQMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
                       + +   ++  +++ +  +G+ YE +      T+   +
Sbjct: 250 FNIHFDNWFSETSLYEKGEIKAVLERMKENGYTYEQDGATWLRTTDFKD 298


>gi|315045129|ref|XP_003171940.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311344283|gb|EFR03486.1| leucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 946

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 41/156 (26%), Gaps = 25/156 (16%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  +               D+   +   A     E+ +I      
Sbjct: 93  HMGHVRVYTISDVLARFKQMKGY-----------DVLHPMGWDAFGLPAENAAIERGIHP 141

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI 152
              T +N          L               P+     Q     +   G AY+A   +
Sbjct: 142 EGWTKQNIANMRDQLKDLGI-RFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVV 200

Query: 153 -IFDTSSIPNYGSFSR-RKIDEQKMGTRVPEKYHKK 186
                         +  + +D      R   K  K+
Sbjct: 201 NYDPIDKT----VLANEQVVDANGCSWRSGAKVEKR 232


>gi|257874768|ref|ZP_05654421.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257808934|gb|EEV37754.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 881

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  A   ++K    S 
Sbjct: 541 -----QYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKIWNASR 583


>gi|208779258|ref|ZP_03246604.1| leucyl-tRNA synthetase [Francisella novicida FTG]
 gi|208745058|gb|EDZ91356.1| leucyl-tRNA synthetase [Francisella novicida FTG]
          Length = 813

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGVKMSKSKGNTVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +  A   L K    +     I
Sbjct: 610 QSLEWSETGVEGANKFLRKVFNYADLNKDI 639



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQLDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192


>gi|146340771|ref|YP_001205819.1| methionyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|146193577|emb|CAL77594.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Bradyrhizobium sp. ORS278]
          Length = 705

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D + R  R     K V ++    +   K+++ A+ E        
Sbjct: 205 PNGSPHIGHAYEAIATDAIARFARLDG--KDVFFLTGTDEHGLKMVQTAQNEGL------ 256

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
             S + ++N  +F +   RL   +     R T   H   +  +   ++ +G  Y      
Sbjct: 257 TPSELAARNAGRFREMDERLNV-SFDRFIRTTEPAHHKSVQAIWTRMLENGDIYADTYSG 315

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 316 WYSVRDEAYY 325



 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  +     ++ H GFL   G KMSKS GN +     
Sbjct: 447 DVHVIGKDIIRFHAVYWPAFLMSA-GVPVPKRVYAH-GFLFNRGEKMSKSVGNVV----- 499

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                     +    +R   L
Sbjct: 500 --DPFNLADQYGVDQLRYFFL 518


>gi|9971928|gb|AAG10490.1|AF279106_52 predicted leucyl-tRNA synthetase (leuS) [uncultured marine gamma
           proteobacterium EBAC31A08]
          Length = 804

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 15/126 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 510 PVDLYIGGIEHAILHLLYSRFFHKALRDMDLVEGNEPFKKL-LTQGMVLKDGAKMSKSKG 568

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +     +E        + A  +RL M+      + ++++   +  A   + K     +
Sbjct: 569 NTVDPQSYIE-------KYGADTVRLYMMFTAPPEQSLEWSESSVEGASRFMKKIWNLVS 621

Query: 343 SKGIID 348
           ++  ID
Sbjct: 622 NRKFID 627


>gi|91772253|ref|YP_564945.1| isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121684526|sp|Q12ZD1|SYI_METBU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91711268|gb|ABE51195.1| Isoleucyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 1058

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 46/203 (22%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       N+ +H   L+  G+KMSKS GN I   E+++        + A  +R  +
Sbjct: 571 SMVAFGKAPYKNVLMHGFTLDGSGKKMSKSIGNVIQPAEVID-------KFGADTLRSYV 623

Query: 312 LMTHYREPID---FTVQRLTEAEIL------LSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
           L      P +   F    L            + ++P    +    DP  +S       +V
Sbjct: 624 LSAS--APWEDLKFNWDELATVHRTNNILWNVYRFPLPYMALDDFDPQKVSY-----ESV 676

Query: 363 SA---------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
            A         +  +  +  E  K  D   +  A   I       E + +++S    +L+
Sbjct: 677 EAYLRSEDKWILSRMQTVIAEVNKAMDARLLHKAMRSI------NEFVLEDLSRWYIQLI 730

Query: 414 QERLILLKMKKFSSADYIRKQLE 436
           + R        +  AD    +L 
Sbjct: 731 RPRT-------WVEADN-PDKLA 745


>gi|328714927|ref|XP_001944432.2| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
           pisum]
          Length = 1194

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 9/84 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DLI  H    I   C                NG L L   KMSKS+GNF+T
Sbjct: 675 PVDLRCSGKDLIQNHLTFFIYNHCAIWAKRPDLWPKSIRANGHLLLNSAKMSKSDGNFMT 734

Query: 288 INELLETKKFGGRSWPAPVIRLAM 311
           + E +         + A  +R  +
Sbjct: 735 LEEAVN-------KFSADGMRFCL 751


>gi|187922292|ref|YP_001893934.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187713486|gb|ACD14710.1| Methionine--tRNA ligase [Burkholderia phytofirmans PsJN]
          Length = 531

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 40/129 (31%), Gaps = 20/129 (15%)

Query: 33  PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           PT     H+G+ A P +  D+L R LR         +VR ++ +D      +      + 
Sbjct: 5   PTPNGRLHLGHIAGPYLRMDMLCRYLRSQG-----HHVRVVSAVDGFD---SYVLWKGLQ 56

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
                  +      Q  +D   L              +   + L+Q      HA  A   
Sbjct: 57  ETRPPEEVCRDYHAQIARDLAALDIE-----------VDDFLDLVQGSHAPSHANTARRA 105

Query: 152 IIFDTSSIP 160
           +    +S  
Sbjct: 106 VEMLVASGH 114


>gi|114327741|ref|YP_744898.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|114315915|gb|ABI61975.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 514

 Score = 45.2 bits (106), Expect = 0.021,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 40/141 (28%), Gaps = 14/141 (9%)

Query: 29  YVCGPTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           Y C   +Y      HIG+A   +  DVL R  R    E        +T  D+      + 
Sbjct: 5   YYCTTPIYYVNGAPHIGHAYTCVATDVLARWKRLEGREVFF-----LTGTDEH---GQKV 56

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHG 143
           E  +                 F     ++   +     R T   H   +  L   +   G
Sbjct: 57  EKAAADAGVDPQTFIDGMADGFRAMAEKMN-TSHDRFIRTTEPEHKKAVAALWSRLEERG 115

Query: 144 HAYEANNEIIFDTSSIPNYGS 164
             Y  + E  +       YG 
Sbjct: 116 EIYLGSYEGWYAVRDEAFYGE 136



 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +     ++ H G+  +EG KMSKS GN I    L
Sbjct: 256 DLHMVGKDILRFHAIFWPAFLMAA-GLPLPRRVFAH-GWWTVEGEKMSKSLGNTIEPGAL 313

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           ++             +R  +L
Sbjct: 314 VDEFGLDP-------VRFFLL 327


>gi|294634955|ref|ZP_06713473.1| isoleucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091664|gb|EFE24225.1| isoleucine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 948

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +           +  H   ++ +GRKMSKS GN ++  +++             ++RL 
Sbjct: 587 IAVAMKGKAPYRQVLTHGFTVDGQGRKMSKSVGNVVSPQQVMNKLG-------GDILRLW 639

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  T Y   +  + + L  +     +   T+ 
Sbjct: 640 VASTDYTGEMAVSDEILKRSADAYRRIRNTAR 671


>gi|262274901|ref|ZP_06052712.1| isoleucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221464|gb|EEY72778.1| isoleucyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 942

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN I+  +++             ++RL +
Sbjct: 582 SVAIKNHAPYKQVLTHGFTVDGQGRKMSKSIGNVISPQDVMNKLG-------GDILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 635 ASTDYTGEMTVSDEILKRSADAYRRIRNTAR 665


>gi|254504424|ref|ZP_05116575.1| isoleucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222440495|gb|EEE47174.1| isoleucyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 986

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 57/161 (35%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   +  +GRKMSKS GN +   +++       + + A ++RL  
Sbjct: 632 SCGTRGHAPYDAVLTHGFTMAEDGRKMSKSLGNQVFPQDII-------KQYGADILRLWT 684

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLS--ALYNDLNTVSA---- 364
               Y E      + +  +     K   T     G +  A     AL +           
Sbjct: 685 ASCDYSEDQRIGPEIIKTSVDSYRKLRNTLRWMLGSLAHATGEEVALSD---MPELERLM 741

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L  + R++  ++D   IF+     + +E+   + +
Sbjct: 742 LHRLAELDAMVRQAYADYDYKKIFHQLFTFMTVELSAFYFD 782


>gi|171689796|ref|XP_001909838.1| hypothetical protein [Podospora anserina S mat+]
 gi|170944860|emb|CAP70972.1| unnamed protein product [Podospora anserina S mat+]
          Length = 1088

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 71/220 (32%), Gaps = 45/220 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         E        NG L L G KM+KS GNF+T++
Sbjct: 675 PLDLRVSGKDLIPNHLTFWLYNHIALFPREFWPKSVRANGHLQLNGAKMAKSTGNFMTLD 734

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           +++       + + A   R+A+                                  I D 
Sbjct: 735 DVV-------KKYGADAARVAL----------------------------ADAGDTIADS 759

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLL-PIFNASAHILGIEVCKEHLNKNISIA 408
             +  + +  NT+       +   E+ K+  L     N    +L  +     L       
Sbjct: 760 NFVEDVAD--NTILRFYTNKEWIEETVKDESLRTGELNDFQDVL-FDNEMNALVAEAKKH 816

Query: 409 IEKLVQERLILLKMK--KFSSA-DYIRKQLESKGFIL-ED 444
            E+      + LK     F +A D  R+   + G  L +D
Sbjct: 817 YEE--TSYKLALKAGHYDFLNARDTYREACTAAGIPLHKD 854


>gi|126658249|ref|ZP_01729399.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126620398|gb|EAZ91117.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 853

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 49/174 (28%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              +    + Y      Y     H+G+ R  ++ DV+ RL R       V +        
Sbjct: 26  TPENSDKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I  N   +  T KN  Q  +    L  L+           P      
Sbjct: 84  LPAENAA------IDRNIPPADWTYKNIAQMKQQLQTLG-LSIDWDREVATCSPDYYKWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 137 QWLFLQFYQAGLAYQKEAAVNWDPIDQT---VLANEQVDSEGYSWRSGAKVERK 187


>gi|15902279|ref|NP_357829.1| leucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116517205|ref|YP_815756.1| leucyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|32171543|sp|Q8DRB6|SYL_STRR6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122279358|sp|Q04MJ2|SYL_STRP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15457782|gb|AAK99039.1| Leucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116077781|gb|ABJ55501.1| leucyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|289578630|ref|YP_003477257.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
 gi|289528343|gb|ADD02695.1| isoleucyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
          Length = 932

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ EGRKMSKS GN +   +++       + + A ++RL  
Sbjct: 575 SVATRGKAPYKNVLTHGFVVDGEGRKMSKSLGNGVDPADVI-------KEYGADILRLWT 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +   +  + + L +      K   TS 
Sbjct: 628 VSADFTSDMRISKEILKQMTEAYRKIRNTSK 658


>gi|225181535|ref|ZP_03734977.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167783|gb|EEG76592.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 652

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 56/163 (34%), Gaps = 51/163 (31%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    ++ H G+L LE  KMSKS GN I    L+E        + +  IR  +L  
Sbjct: 277 ALGLELPKQVFGH-GWLLLEEGKMSKSKGNVIDPEVLVER-------YGSDAIRYFLLRE 328

Query: 314 ------THYREPIDFTVQRLTE----------------AEILLSKWPQTSTSKGIIDPAV 351
                  H      F+ + L +                   +L+K+ Q       +D A+
Sbjct: 329 IPFGADGH------FSEEALIQRLNFDLANDLGNLLNRTLAMLNKYYQGKVPTPSLDEAI 382

Query: 352 LS-----ALY---------NDLNTVSAIQALHKLARESTKNHD 380
                  AL          + L   +A+  L K    + K  D
Sbjct: 383 DEELKSMALDLPQKMTERMDQLLFSNALSELWKFIARANKYID 425


>gi|172039150|ref|YP_001805651.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|226710934|sp|B1WSK6|SYL_CYAA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171700604|gb|ACB53585.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 853

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 49/174 (28%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              +    + Y      Y     H+G+ R  ++ DV+ RL R       V +        
Sbjct: 26  TPENSDKPKFYALSMFPYPSGNLHMGHVRNYVITDVIARLKRLQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I  N   +  T KN  Q  +    L  L+           P      
Sbjct: 84  LPAENAA------IDRNIPPADWTYKNIAQMKQQLQTLG-LSIDWDREVATCSPDYYKWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 137 QWLFLQFYQAGLAYQKEAAVNWDPIDQT---VLANEQVDSEGYSWRSGAKVERK 187


>gi|135143|sp|P13503|SYLM_SACDO RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|68519|pir||SYBYMX leucine-tRNA ligase (EC 6.1.1.4) precursor, mitochondrial - yeast
           (Saccharomyces sp.)
 gi|4842|emb|CAA31343.1| unnamed protein product [Saccharomyces douglasii]
          Length = 894

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 45/155 (29%), Gaps = 24/155 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           HIG+ R  ++ D L R  +               ++   +   A     E+ +I      
Sbjct: 63  HIGHLRVYVISDSLNRFYKQRGY-----------NVIHPMGWDAFGLPAENAAIERGINP 111

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI 152
           +I T  N  +  +    +           T   P+     Q     +  +G AY    EI
Sbjct: 112 AIWTRDNIAKMKQQMESM-LANFDWDREVTTCDPEYYKFTQWIFLKLFENGLAYRKEAEI 170

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                         +  ++D Q    R      KK
Sbjct: 171 NWDPVDKT----VLANEQVDAQGRSWRSGAIVEKK 201


>gi|66800699|ref|XP_629275.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996458|sp|Q54CE4|SYIM_DICDI RecName: Full=Probable isoleucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Isoleucine--tRNA ligase; Short=IleRS;
           Flags: Precursor
 gi|60462665|gb|EAL60867.1| isoleucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1034

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 8/157 (5%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S C   IE   N+  H   L+  G KMSKS GN I  + +
Sbjct: 610 DIYLEGSDQHRGWFQSSLLTSVCVRDIEPYKNVVTHGFLLDESGIKMSKSIGNTIVPSTV 669

Query: 292 LETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKG 345
           ++      +   +   ++R  +  + Y + I      L +    + K   T      S  
Sbjct: 670 IKGGPNKVQNPPYGVDLLRTWVASSDYSKDISIGPNILIKILDGIKKIRNTLRFMLASNF 729

Query: 346 IIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
             DP + +  Y  L+++   A+  + KL    T+++D
Sbjct: 730 DFDPTIHAIPYEKLSSLDKYALHRVFKLQESVTRHYD 766


>gi|329121046|ref|ZP_08249677.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327471208|gb|EGF16662.1| leucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 828

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 55/176 (31%), Gaps = 41/176 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                    E   N+ +  G +  +G KMSKS G
Sbjct: 535 QVDQYIGGIEHAILHLLYSRFFMKVLYDEGLVRDSEPFKNL-LCQGMVLKDGGKMSKSVG 593

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  E++         + A   RL +L      + ++++ + +  A   L +      
Sbjct: 594 NVVSPEEIVS-------KYGADTARLFILFAAPPEKDLEWSDKGVEGAYRFLKRVWIIVD 646

Query: 343 SKGIIDPAVLSALYND------------------------LNTVSAIQALHKLARE 374
               +       L  +                         NT  AI ++ +L  +
Sbjct: 647 RFINLKTESREELNENEKALRRRLHRSIAKVTSDLNGKFSFNT--AISSIMELVND 700


>gi|319938282|ref|ZP_08012679.1| leucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319806575|gb|EFW03233.1| leucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 798

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 59/182 (32%), Gaps = 46/182 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H       +            E    ++ H G  L   G KMSKS 
Sbjct: 522 PVDLYVGGPEHAVGHLLYSRMWNRYLYDKGYLSHPEPFQKLY-HQGMILGGNGEKMSKSK 580

Query: 283 GNFITINELLETKKFGGRSWPAPVIR---LAMLMTHYREPID----FTVQRLTEAEILLS 335
           GN I  ++++ T       + A  +R   + M       P++    ++   +  A   L 
Sbjct: 581 GNVINPDDIVNT-------YGADTLRVYEMFMG------PLEASKPWSESGVDGARKWLD 627

Query: 336 KWPQTSTSKGIIDPAVLSALY-----------ND-----LNTVSAIQALHKLARESTKNH 379
           +  +     G +      +L            ND      NT  AI  +     E+ K  
Sbjct: 628 RVYRLIIESGKLTDNNDHSLDFVYHQTVKKVTNDYETLGFNT--AISQMMIFVNEAYKAP 685

Query: 380 DL 381
            L
Sbjct: 686 TL 687


>gi|296284128|ref|ZP_06862126.1| methionyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 520

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   +  DV+ R  R    +     VR  T  D+  ++ AR+             
Sbjct: 18  PHIGHAYETVAADVIARFQRLKGRD-----VRFQTGTDEHGLKMARKAEEQ---GKTPRE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  + +  F     RL         R T   H      L + +  +G  Y    E  +  
Sbjct: 70  LADEMSGYFRDLFDRLNISY-DRFIRTTEAGHHTASQALWRRMEANGDLYLDRYEGWYSV 128

Query: 157 SSIPNY 162
                Y
Sbjct: 129 RDEAFY 134


>gi|229530488|ref|ZP_04419876.1| isoleucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
 gi|229332261|gb|EEN97749.1| isoleucyl-tRNA synthetase [Vibrio cholerae 12129(1)]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|159158351|gb|ABW94430.1| CysS [Treponema paraluiscuniculi]
 gi|159158353|gb|ABW94431.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158355|gb|ABW94432.1| CysS [Treponema pallidum subsp. endemicum]
 gi|159158357|gb|ABW94433.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158359|gb|ABW94434.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158361|gb|ABW94435.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158363|gb|ABW94436.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158365|gb|ABW94437.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158367|gb|ABW94438.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158369|gb|ABW94439.1| CysS [Treponema pallidum subsp. pertenue str. Gauthier]
 gi|159158371|gb|ABW94440.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158373|gb|ABW94441.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158375|gb|ABW94442.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158377|gb|ABW94443.1| CysS [Treponema pallidum subsp. endemicum]
 gi|159158379|gb|ABW94444.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158381|gb|ABW94445.1| CysS [Treponema pallidum subsp. pallidum str. Mexico A]
 gi|159158383|gb|ABW94446.1| CysS [Treponema pallidum subsp. pallidum str. Nichols]
 gi|159158385|gb|ABW94447.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158387|gb|ABW94448.1| CysS [Treponema pallidum subsp. pallidum]
 gi|159158389|gb|ABW94449.1| CysS [Treponema paraluiscuniculi]
 gi|159158391|gb|ABW94450.1| CysS [Treponema paraluiscuniculi]
 gi|159158393|gb|ABW94451.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158395|gb|ABW94452.1| CysS [Treponema pallidum subsp. pertenue]
 gi|159158397|gb|ABW94453.1| CysS [Treponema pallidum]
          Length = 55

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 5/52 (9%)

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMG-----TRVPEKYHKKNPADFILW 194
           A   + FD  S P+Y SF    +++ + G      RV    HK++  DF+LW
Sbjct: 1   AGGNVYFDVRSFPSYESFGSAAVEDVQEGEDAARARVAHDTHKRDARDFVLW 52


>gi|83309933|ref|YP_420197.1| isoleucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|82944774|dbj|BAE49638.1| Isoleucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 663

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 7/103 (6%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN +   E++ T         A ++RL +
Sbjct: 316 SCGTRGRAPYDAVLTHGFVLDEDGRKMSKSLGNVVAPQEVVGTMG-------ADILRLWV 368

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
           + + Y + +    + L     +  +   T            +A
Sbjct: 369 VGSDYSDDLRIGPEILKTQVDIYRRLRNTLRYLLGAVDGFAAA 411


>gi|58616795|ref|YP_195994.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311281|sp|Q5FF72|SYV_EHRRG RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58416407|emb|CAI27520.1| Valyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 812

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 18/173 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           I Q+          NI + +G+ L  +  KMSKS GN +  N+LL       + + A VI
Sbjct: 508 ILQAYYHHNSIPWENI-MVSGWCLAADKSKMSKSKGNALIPNQLL-------QEYGADVI 559

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ- 366
           R     +       F+ + L   + L++K    S    +           DLN V+    
Sbjct: 560 RYWAANSRLGSDTVFSDEVLQLGKRLVTKLWNASKFVSMFVSQCQIP---DLNYVTETMD 616

Query: 367 --ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
              L KL +   K  +   +F        ++  +    K+      +LV++R 
Sbjct: 617 KWVLTKLYKVIVKATESFDVFEYCVA---LDYIESFFWKDFCDNYLELVKKRA 666


>gi|29377395|ref|NP_816549.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227554378|ref|ZP_03984425.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|75541540|sp|Q82ZW6|SYV_ENTFA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29344862|gb|AAO82619.1| valyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|227176497|gb|EEI57469.1| valyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315576283|gb|EFU88474.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315582775|gb|EFU94966.1| valyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          N+ IH    + 
Sbjct: 463 GWPNEASEDYQRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|319407220|emb|CBI80859.1| Methionyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 513

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   IV D L R  +           +N+  +        + +  +  +N 
Sbjct: 14  PNSAPHIGHAYNAIVSDTLARFQKADG--------KNVFFLSGTDEHGLKMQQTAEMLNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N+  F K    L C       R T   H      L + +   G  Y      
Sbjct: 66  TPQQLADRNSAVFQKMLAVLNCSNNDF-IRTTEERHHKACQELWKKMEAKGDIYLGCYAG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYSVRQESYY 134


>gi|195442760|ref|XP_002069114.1| GK24181 [Drosophila willistoni]
 gi|194165199|gb|EDW80100.1| GK24181 [Drosophila willistoni]
          Length = 938

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +++H   ++ +G KMSKS GN I+  ++        + +   V+R  +
Sbjct: 605 SIAARNTAPYKALFVHGFTVDEKGHKMSKSLGNVISPKQI-------TKKYGTDVLRWWV 657

Query: 312 LMTHYREP-IDFTVQRLTEAEILLSKWP 338
                +   I  + + L ++   LSK  
Sbjct: 658 ASHGTQNMSITVSDKLLQQSADNLSKIR 685


>gi|221231157|ref|YP_002510309.1| leucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225853856|ref|YP_002735368.1| leucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|254782516|sp|B8ZKS5|SYL_STRPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782839|sp|C1CC47|SYL_STRZJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|220673617|emb|CAR68104.1| leucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|225722605|gb|ACO18458.1| leucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|194396969|ref|YP_002036956.1| leucyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|238690847|sp|B5E6T0|SYL_STRP4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194356636|gb|ACF55084.1| leucyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|319945678|ref|ZP_08019929.1| leucine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319748038|gb|EFW00281.1| leucine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 40/213 (18%), Positives = 71/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--VALADEK 807


>gi|281366294|ref|NP_648837.2| CG5414 [Drosophila melanogaster]
 gi|272455213|gb|AAF49539.2| CG5414 [Drosophila melanogaster]
          Length = 941

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 12/93 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S  A        +++H   ++ +G KMSKS GN I+  ++        + +    +R  
Sbjct: 603 MSIAARECAPYKALFVHGFTVDEKGYKMSKSLGNVISPKQI-------TKKYGTDALRWW 655

Query: 311 MLMT---HYREPIDFTVQRLTEAEILLSKWPQT 340
           +      H    I  + + L +A   L K   T
Sbjct: 656 VASHGTQHM--SITVSDKLLQQAAENLCKIRGT 686


>gi|218708570|ref|YP_002416191.1| isoleucyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782454|sp|B7VJ87|SYI_VIBSL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218321589|emb|CAV17541.1| Isoleucyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 952

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 592 SIAMKDEAPYKQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 644

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 645 ASTDYTNEVAVSDEILKRSADAYRRIRNTAR 675


>gi|254477127|ref|ZP_05090513.1| isoleucyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031370|gb|EEB72205.1| isoleucyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 976

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 630 QACGTKGRAPYRNVVTHGFTLDEKGNKMSKSLGNTIVPEKIV-------QQYGADILRLW 682

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 683 VAQTDYTADQRIGPEILKGVADGYRRLRNT 712


>gi|207091754|ref|ZP_03239541.1| isoleucyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 920

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 56/149 (37%), Gaps = 15/149 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCILNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYN----DLNTV 362
           +    Y+  +  +    T+ E    K+  T      +   +D   L   ++    D   +
Sbjct: 637 VAFNDYQNDLRVSQTFFTQTEQHYKKFRNTLKFLLANFSDMDLKNLERSHDFSPLDHFIL 696

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHI 391
            A++ +      + + HD +   N     
Sbjct: 697 EALETISAGVNSAFEEHDFVKGLNVLMAF 725


>gi|34556660|ref|NP_906475.1| methionyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|34482374|emb|CAE09375.1| METHIONYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 649

 Score = 45.2 bits (106), Expect = 0.022,   Method: Composition-based stats.
 Identities = 67/356 (18%), Positives = 102/356 (28%), Gaps = 86/356 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L    R    E   T+    TD         + E  +     
Sbjct: 14  VNDIPHIGHAYTTMIGDSLAHYYRLIGHE---TFFLTGTD-----EHGQKIEQSAQKKGK 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  + +  F     R       H  R T+  H   +      +   G  Y  E   
Sbjct: 66  TPQAYADEISGAFKSLWDRFEISY-DHFIRTTDAKHKQGVQKAFLKMFEKGDIYKGEYEG 124

Query: 151 EIIFDTSSI------------PNYGSFSRRKIDEQ--KMGTRVPEK---YHKKNPADFIL 193
                  +             P  G  +    +E      +R  EK   ++K+NP D IL
Sbjct: 125 HYCVSCETFFTKRQLVDDLYCPECGKETSLVKEESYFFALSRYQEKLLAWYKENP-DCIL 183

Query: 194 WKRSTPMEPGW-------------ESPWGRGRPGWHIECSAMSS-------------HYL 227
            K        +                WG   P    E +A                  L
Sbjct: 184 PKPKKNEVMRFVESGLDDLSITRTSFDWGVKLPQ---EMNAPKHVMYVWLDALLNYVTAL 240

Query: 228 GKVFD----------IHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLE 274
           G   D          +H  G D++  H     A    A  +            +G+    
Sbjct: 241 GYGDDEKRMDFWPARVHLVGKDILRFH-----AIYWPAFLMSLDLPLPKHVAAHGWWTRN 295

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           G KMSKS GN I   E+ +       ++     R  ML    + +  DF+ + L +
Sbjct: 296 GAKMSKSVGNVINPQEVAD-------AYGVEPFRYFMLREVPFGQDGDFSQKALID 344


>gi|293400858|ref|ZP_06645003.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305884|gb|EFE47128.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 908

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 51/148 (34%), Gaps = 10/148 (6%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           AM    LG   D++  G D       + +              +  H   ++ +G KMSK
Sbjct: 537 AMVERGLGYPADLYFEGSDQYRGWFNSSLIIGTAVHGHSPYKQVLSHGFVMDGKGVKMSK 596

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S  N +   E+        + + A ++RL      Y+     + + L +      K   T
Sbjct: 597 SQWNAVAPGEI-------TKKYGADILRLWAASVDYQADCSMSDEILKQISENYRKVRNT 649

Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAI 365
                +    +     A   D+NT+ A+
Sbjct: 650 FRFLLANIDGENDFTKADLVDVNTLPAL 677


>gi|302876074|ref|YP_003844707.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307686795|ref|ZP_07629241.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302578931|gb|ADL52943.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 538

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 39/112 (34%), Gaps = 11/112 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+   ++  DVL R   Y      V YV         I  RA++E        +   I
Sbjct: 17  HIGHIAALLPGDVLARY--YRGKGDNVLYVSGSDCHGTPISIRAKKE------GVSPKDI 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
             K   +F K   +L      +  R  +  H  ++   I  +   G  YE  
Sbjct: 69  ADKYHGEFKKCFEKLNFSY-DYYGRTDDEFHKKEVQEAILLLYNKGLIYEKE 119


>gi|225860293|ref|YP_002741802.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|254782841|sp|C1CPD0|SYL_STRZT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225726398|gb|ACO22249.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYIDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|153826757|ref|ZP_01979424.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-2]
 gi|149739408|gb|EDM53648.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-2]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|221069982|ref|ZP_03546087.1| leucyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220715005|gb|EED70373.1| leucyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 902

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 40/143 (27%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D S  + Y C    Y     H+G+ R   + D+L R LR       V          
Sbjct: 26  VTEDGSKPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYN--VLMPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A +           +  T +N     K    +  LA           P+     
Sbjct: 84  LPAENAALKNKVP------PAKWTYENIAYMKKQMQAMG-LAIDWSREVATCDPEYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLEKGIAYRKTQVVNWD 159


>gi|56421173|ref|YP_148491.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819656|sp|Q5KWL3|SYV_GEOKA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56381015|dbj|BAD76923.1| valyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 540 ID-------QYGADALRYFLATGS--SPGQDLRFSTEKVEATWNFANKIWNASR 584


>gi|86148416|ref|ZP_01066707.1| isoleucyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85833770|gb|EAQ51937.1| isoleucyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 930

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 570 SIAMKDEAPYKQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 623 ASTDYTNEVAVSDEILKRSADAYRRIRNTAR 653


>gi|116617448|ref|YP_817819.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|116096295|gb|ABJ61446.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
          Length = 894

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 17/137 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           N+ IH    + EGRKMSKS GN +   +++E  
Sbjct: 495 TGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIE-- 552

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  ++      + + FT +++  A   ++K    S         V+  
Sbjct: 553 -----KYGADALRWFLVTGSTPGQDLRFTYEKMDSAWNFINKIWNASRY-------VIMN 600

Query: 355 LYNDLNTVSAIQALHKL 371
           L  D  T S +  + +L
Sbjct: 601 LDED--TPSTLPDMSQL 615


>gi|313681647|ref|YP_004059385.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154507|gb|ADR33185.1| leucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 815

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 8/85 (9%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +   EL+         + A   RL +L      + +++  
Sbjct: 572 LTQGMVLKDGAKMSKSKGNTVDPGELVA-------KYGADTARLFILFAAPPTQELEWND 624

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDP 349
             +  A   L ++   S    + D 
Sbjct: 625 SAVEGAFRFLKRFADRSQYVNVTDK 649


>gi|297569151|ref|YP_003690495.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296925066|gb|ADH85876.1| isoleucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 946

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 19/112 (16%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   ++ +G+KMSKS GN I   +++E          A ++RL      Y
Sbjct: 596 GTAPYKAVLTHGFVVDGKGKKMSKSIGNVIAPGQIIEKHG-------AEILRLWAASEDY 648

Query: 317 REPIDFTVQRLTEAEILLSKWPQT------------STSKGIIDPAVLSALY 356
           R+ I  +   L +      K   T             T+ G    A +  L 
Sbjct: 649 RDDIRISDNILKQLADAYRKIRNTVRFLLGNLHDFDPTAPGAPPEAEMDELD 700


>gi|110803500|ref|YP_699779.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684001|gb|ABG87371.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 514

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     +  D+L R  R    E  V +V         I+ +A++      IN +   +
Sbjct: 17  HIGRVSSWMAGDILARYHRAKGDE--VIFVSGSDCHGSPILNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R T+   H  Q+  +I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFDIFTR-TDSEYHEKQVKNIIKSLYDKGFIYEKETEEFYC 125


>gi|327483482|gb|AEA77889.1| Isoleucyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|297544853|ref|YP_003677155.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296842628|gb|ADH61144.1| isoleucyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 932

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+  H   ++ EGRKMSKS GN +   +++       + + A ++RL  
Sbjct: 575 SVATRGKAPYKNVLTHGFVVDGEGRKMSKSLGNGVDPADVI-------KEYGADILRLWT 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +   +  + + L +      K   TS 
Sbjct: 628 VSADFTSDMRISKEILKQMTEAYRKIRNTSK 658


>gi|294881711|ref|XP_002769459.1| hypothetical protein Pmar_PMAR008958 [Perkinsus marinus ATCC
          50983]
 gi|239872918|gb|EER02177.1| hypothetical protein Pmar_PMAR008958 [Perkinsus marinus ATCC
          50983]
          Length = 50

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
          + +AR  + FD+++R+   Y+ +    Y  NITDIDDKII  A
Sbjct: 1  MEHARAYLTFDIIWRIPEDYF-QYRFLYQMNITDIDDKIILEA 42


>gi|229916464|ref|YP_002885110.1| leucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229467893|gb|ACQ69665.1| leucyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 801

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 47/142 (33%), Gaps = 30/142 (21%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++     L     KMSKS GN +  ++++++         A  +RL  M M    
Sbjct: 560 EPFQKLYNQGMILGENNEKMSKSRGNVVNPDDIVKSHG-------ADTLRLYEMFMGPLD 612

Query: 318 EPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPAV--------------LSALYNDL 359
             I ++   L  A   L +    + QT+ +                        AL    
Sbjct: 613 AAIAWSTNGLDGARRFLDRVWRLFDQTNFADVAPTADFERTYHQTVKKVTEDYEALR--F 670

Query: 360 NTVSAIQALHKLARESTKNHDL 381
           NT  AI  L     E+ K   L
Sbjct: 671 NT--AISQLMVFVNEANKQETL 690


>gi|229519956|ref|ZP_04409386.1| isoleucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
 gi|229343008|gb|EEO07996.1| isoleucyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|227431198|ref|ZP_03913252.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
 gi|227352960|gb|EEJ43132.1| valyl-tRNA synthetase [Leuconostoc mesenteroides subsp. cremoris
           ATCC 19254]
          Length = 894

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 55/137 (40%), Gaps = 17/137 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           N+ IH    + EGRKMSKS GN +   +++E  
Sbjct: 495 TGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIE-- 552

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  ++      + + FT +++  A   ++K    S         V+  
Sbjct: 553 -----KYGADALRWFLVTGSTPGQDLRFTYEKMDSAWNFINKIWNASRY-------VIMN 600

Query: 355 LYNDLNTVSAIQALHKL 371
           L  D  T S +  + +L
Sbjct: 601 LDED--TPSTLPDMSQL 615


>gi|261418346|ref|YP_003252028.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319767695|ref|YP_004133196.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261374803|gb|ACX77546.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317112561|gb|ADU95053.1| valyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 540 ID-------QYGADALRYFLATGS--SPGQDLRFSTEKVEATWNFANKIWNASR 584


>gi|254291960|ref|ZP_04962740.1| isoleucyl-tRNA synthetase [Vibrio cholerae AM-19226]
 gi|150422099|gb|EDN14066.1| isoleucyl-tRNA synthetase [Vibrio cholerae AM-19226]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|153829358|ref|ZP_01982025.1| isoleucyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229525334|ref|ZP_04414739.1| isoleucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
 gi|148875141|gb|EDL73276.1| isoleucyl-tRNA synthetase [Vibrio cholerae 623-39]
 gi|229338915|gb|EEO03932.1| isoleucyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|84393572|ref|ZP_00992325.1| isoleucyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375781|gb|EAP92675.1| isoleucyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 952

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 592 SIAMKDEAPYKQVLTHGFVVDGNGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 644

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 645 ASTDYTNEVAVSDEILKRSADAYRRIRNTAR 675


>gi|15640701|ref|NP_230331.1| isoleucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587755|ref|ZP_01677515.1| isoleucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|153818724|ref|ZP_01971391.1| isoleucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227080863|ref|YP_002809414.1| isoleucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229505697|ref|ZP_04395207.1| isoleucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229508729|ref|ZP_04398222.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229519521|ref|ZP_04408964.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229608716|ref|YP_002879364.1| isoleucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254851014|ref|ZP_05240364.1| isoleucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255743859|ref|ZP_05417815.1| isoleucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262156078|ref|ZP_06029197.1| isoleucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
 gi|81545342|sp|Q9KU47|SYI_VIBCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782452|sp|C3LST7|SYI_VIBCM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|9655121|gb|AAF93847.1| isoleucyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121547982|gb|EAX58062.1| isoleucyl-tRNA synthetase [Vibrio cholerae 2740-80]
 gi|126510746|gb|EAZ73340.1| isoleucyl-tRNA synthetase [Vibrio cholerae NCTC 8457]
 gi|227008751|gb|ACP04963.1| isoleucyl-tRNA synthetase [Vibrio cholerae M66-2]
 gi|229344210|gb|EEO09185.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC9]
 gi|229354253|gb|EEO19183.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|229357920|gb|EEO22837.1| isoleucyl-tRNA synthetase [Vibrio cholerae BX 330286]
 gi|229371371|gb|ACQ61794.1| isoleucyl-tRNA synthetase [Vibrio cholerae MJ-1236]
 gi|254846719|gb|EET25133.1| isoleucyl-tRNA synthetase [Vibrio cholerae MO10]
 gi|255738490|gb|EET93879.1| isoleucyl-tRNA synthetase [Vibrio cholera CIRS 101]
 gi|262030114|gb|EEY48759.1| isoleucyl-tRNA synthetase [Vibrio cholerae INDRE 91/1]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|222148592|ref|YP_002549549.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735578|gb|ACM36541.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 525

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     K V ++    +   K+ + AR E        A   
Sbjct: 18  PHIGHAYELIATDAMARFQRLDG--KDVFFLTGTDEHGQKMQQTARNE------GIAPEE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+ +F     +L   +     R T   H      + + +  +G  Y+ +    +  
Sbjct: 70  LAKRNSDEFRA-MGKLLNASNDDFIRTTEARHHAASQEIWKRMEKNGDIYKDSYAGWYSV 128

Query: 157 SSIPNY 162
                Y
Sbjct: 129 RDEAYY 134


>gi|153801875|ref|ZP_01956461.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-3]
 gi|124122586|gb|EAY41329.1| isoleucyl-tRNA synthetase [Vibrio cholerae MZO-3]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|27262522|gb|AAN87542.1| Leucyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 775

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIE------KTANIWIHNGFLNLEGRKMSKSNGNF 285
           D + GG++    H       +     ++         N+ +  G + + G KMSKS GN 
Sbjct: 545 DQYIGGVEHAILHLMYARFFTKVLYDLKIVSVEEPFENL-LTQGMVLMGGSKMSKSKGNT 603

Query: 286 ITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK-WPQTSTS 343
           ++  E++         + A   RL +L        ++++ + +  A   L + W    T 
Sbjct: 604 VSPEEIIA-------KYGADTARLFILFAAPPERDLEWSDRGVEGAHRFLHRVWRLVQTY 656

Query: 344 KGIIDP 349
               D 
Sbjct: 657 GDQFDN 662


>gi|254227134|ref|ZP_04920678.1| isoleucyl-tRNA synthetase [Vibrio cholerae V51]
 gi|125620342|gb|EAZ48732.1| isoleucyl-tRNA synthetase [Vibrio cholerae V51]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|297529198|ref|YP_003670473.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297252450|gb|ADI25896.1| valyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 540 ID-------QYGADALRYFLATGS--SPGQDLRFSTEKVEATWNFANKIWNASR 584


>gi|254779935|ref|YP_003058042.1| isoleucyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001848|emb|CAX30096.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Helicobacter pylori B38]
          Length = 920

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 15/149 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYN----DLNTV 362
           +    Y+  +  +     + E    K+  T      +   +D   L   ++    D   +
Sbjct: 637 VAFNDYQNDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDMDLKNLERSHDFSPLDHFIL 696

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHI 391
            A++ +      + + HD +   N     
Sbjct: 697 EALETISAGVNSAFEEHDFVKGLNILMAF 725


>gi|229512427|ref|ZP_04401901.1| isoleucyl-tRNA synthetase [Vibrio cholerae TMA 21]
 gi|229350577|gb|EEO15523.1| isoleucyl-tRNA synthetase [Vibrio cholerae TMA 21]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|182683235|ref|YP_001834982.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|238691187|sp|B2ISI0|SYL_STRPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|182628569|gb|ACB89517.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETDKSISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|71064940|ref|YP_263667.1| isoleucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|84029561|sp|Q4FUS5|SYI_PSYA2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71037925|gb|AAZ18233.1| Isoleucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 941

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 37/109 (33%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN IT  E +           A ++RL +
Sbjct: 575 SEAMYERPPFKQVLTHGFVVDENGRKMSKSLGNIITPQEEINKTG-------ADMLRLWI 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             + YR  +         +  +  +   T           L A  +D +
Sbjct: 628 ASSDYRYEMSAGKTVFKGSIDMYRRIRNTLR--------FLLANTDDFD 668


>gi|297580806|ref|ZP_06942732.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC385]
 gi|297535222|gb|EFH74057.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC385]
          Length = 949

 Score = 45.2 bits (106), Expect = 0.023,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|303259306|ref|ZP_07345284.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261062|ref|ZP_07347011.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263390|ref|ZP_07349313.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303265555|ref|ZP_07351455.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303267887|ref|ZP_07353689.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|301801197|emb|CBW33871.1| leucyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302637899|gb|EFL68385.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302639724|gb|EFL70181.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642583|gb|EFL72928.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644995|gb|EFL75242.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302647163|gb|EFL77387.1| leucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETDESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|298230202|ref|ZP_06963883.1| leucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298256035|ref|ZP_06979621.1| leucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502072|ref|YP_003724012.1| leucine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|298237667|gb|ADI68798.1| leucine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYIDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|229019683|ref|ZP_04176490.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229175140|ref|ZP_04302656.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228608276|gb|EEK65582.1| Valyl-tRNA synthetase [Bacillus cereus MM3]
 gi|228741590|gb|EEL91783.1| Valyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 881

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 17/145 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y     D    G D+IF      I Q           ++ IH    + 
Sbjct: 465 GWPDEDSADFKRY--YSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDE 522

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   +++E        + A  +R  +       + + F+++++     
Sbjct: 523 QGRKMSKSLGNGIDPMDVIE-------KYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN 575

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYN 357
            ++K    S         VL  + +
Sbjct: 576 FINKIWNASR-------FVLMNMDD 593


>gi|316974706|gb|EFV58184.1| leucyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
          Length = 1175

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N +A         K       NG L L   KMSKS GNF
Sbjct: 666 PVDLRVSGKDLIQNHLTYYLYNHVAMW--PSDPSKWPRSVWANGHLLLNNEKMSKSTGNF 723

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E +E        + A  +RLA+
Sbjct: 724 LTLVEAVER-------YSADGMRLAL 742


>gi|308185182|ref|YP_003929315.1| isoleucyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308061102|gb|ADO02998.1| isoleucyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 920

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 15/149 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYN----DLNTV 362
           +    Y+  +  +     + E    K+  T      +   +D   L   ++    D   +
Sbjct: 637 VAFNDYQNDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDMDLKDLERSHDFSPLDHFIL 696

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHI 391
            A++ +      + + HD +   N     
Sbjct: 697 EALETISAGVNSAFEEHDFVKGLNILMAF 725


>gi|264680698|ref|YP_003280608.1| hypothetical protein CtCNB1_4567 [Comamonas testosteroni CNB-2]
 gi|262211215|gb|ACY35313.1| hypothetical protein CtCNB1_4567 [Comamonas testosteroni CNB-2]
          Length = 902

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 40/143 (27%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D S  + Y C    Y     H+G+ R   + D+L R LR       V          
Sbjct: 26  VTEDGSKPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYN--VLMPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A +           +  T +N     K    +  LA           P+     
Sbjct: 84  LPAENAALKNKVP------PAKWTYENIAYMKKQMQAMG-LAIDWSREVATCDPEYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLEKGIAYRKTQVVNWD 159


>gi|327278796|ref|XP_003224146.1| PREDICTED: LOW QUALITY PROTEIN: leucyl-tRNA synthetase,
           cytoplasmic-like [Anolis carolinensis]
          Length = 1175

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 22/194 (11%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     ++ EK       NG L L   KMSKS 
Sbjct: 663 FWYPVDLRASGKDLVPNHLSYYLYNHVAMW--PNQREKWPVSVRANGHLLLNSEKMSKST 720

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEI-LLSKWP 338
           GNF+T++E +       + + A  +RLA+      + +   +F ++ + +A I  L  W 
Sbjct: 721 GNFLTLSEAV-------QKFSADGMRLALADAG--DTVEDANF-METMADAGILRLYTWV 770

Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
           +          ++ S   +  N       ++    ++ +N++ + +F  +    G    +
Sbjct: 771 EWVKEMLANWDSLRSGPADTFNDRVFFSEINAGIMKTEQNYEKM-MFKEALKT-GFFEFQ 828

Query: 399 EHLNKNISIAIEKL 412
              +K   +AIE +
Sbjct: 829 AAKDKYRELAIEGM 842


>gi|320108281|ref|YP_004183871.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
 gi|319926802|gb|ADV83877.1| leucyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
          Length = 846

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 39/138 (28%), Gaps = 15/138 (10%)

Query: 21  IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +     + YV     Y     H+G+ R   + D L R    +     V +          
Sbjct: 40  VTEGKPKYYVLEMLPYPSGQLHMGHVRNYSIGDALARY--QWMRGFNVLHPMGWDSFGLP 97

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ- 137
               A      I  N      T  N  +      R+  L+   Q   T  +P      Q 
Sbjct: 98  AENAA------IKNNIPPREWTLGNIAEMRVQMRRMG-LSYDWQREVTTCLPDYYKWNQW 150

Query: 138 ---NIILHGHAYEANNEI 152
               +   G AY   +++
Sbjct: 151 LFLKMYEKGLAYRKQSKV 168



 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 31/166 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +         +  E    ++   G +   G KMSKS G
Sbjct: 542 PIDQYIGGVEHAILHLIYSRYWTKVMRDLGLIENDEPATRLFT-QGMVIKNGAKMSKSKG 600

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++ +E++         + A   R  A+        +++    +      L++  + +T
Sbjct: 601 NIVSPDEMIA-------KYGADATRMYALFAAPPDRDLEWQEDGVAGISRFLARVYRLTT 653

Query: 343 SKGIIDPAV-----------LSALYNDLNTVSAIQALHKLARESTK 377
                  A             +AL     T   ++ L KL +   K
Sbjct: 654 KYAPAIAAHEKREKKTHAGSFAAL-----TPEGMKLLRKLHQTIAK 694


>gi|307126472|ref|YP_003878503.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306483534|gb|ADM90403.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYIDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|299529413|ref|ZP_07042851.1| leucyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298722662|gb|EFI63581.1| leucyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 902

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 40/143 (27%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D S  + Y C    Y     H+G+ R   + D+L R LR       V          
Sbjct: 26  VTEDGSKPKYYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYN--VLMPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A +           +  T +N     K    +  LA           P+     
Sbjct: 84  LPAENAALKNKVP------PAKWTYENIAYMKKQMQAMG-LAIDWSREVATCDPEYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLEKGIAYRKTQVVNWD 159


>gi|284048830|ref|YP_003399169.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953051|gb|ADB47854.1| isoleucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 934

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++  H   L+ EGRKMSKS GN +   E+++        + A ++RL  
Sbjct: 585 SVAVTGKAPYRSVLTHGYVLDGEGRKMSKSLGNVVVPQEVID-------QYGADIVRLWA 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y++ +  +   L +      K   T
Sbjct: 638 ASSDYKQDVRISPVILKQLAEAYRKVRNT 666



 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 16/124 (12%), Positives = 39/124 (31%), Gaps = 10/124 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER---ARQEHPSIPI 92
            H+G+A   ++ D++ +       +           +  I+   ++     R +   + +
Sbjct: 68  IHMGHALNKVLKDIIIKYKYAQGYDTPYVPGWDTHGMP-IEHACLKATGVDRHKLSPVEL 126

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
                    +      KD  RL  L     P  T   +   + I +   +   G+ Y+  
Sbjct: 127 RKMCREYALQWIDTQRKDFKRLGVLGDWDHPYVTLDPHFEAEQIRVFGTMANKGYIYKGK 186

Query: 150 NEII 153
             + 
Sbjct: 187 KTVY 190


>gi|237756463|ref|ZP_04584999.1| leucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691377|gb|EEP60449.1| leucyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 608

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 42/149 (28%), Gaps = 18/149 (12%)

Query: 9   NTLERKITE---FQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           N+  ++  E   F+  +    + YV    P      H+G+ R   + DV+ R   Y    
Sbjct: 10  NSFLKEWEENKIFKTKEEEGNKYYVLEMFPYPSGKIHMGHVRNYAIGDVVNRY--YRMAG 67

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K   +              A +           +  T +N     +   RL         
Sbjct: 68  KNTLHPMGWDAFGMPAENAAIKHGVH------PAKWTYENIDYMRQQLKRLGFSY-DWDR 120

Query: 124 RATNHIPQMIYLIQ----NIILHGHAYEA 148
             T   P+     Q     +   G AY  
Sbjct: 121 EVTTCNPEYYKWNQWIFLKMFEKGIAYRK 149


>gi|229025922|ref|ZP_04182314.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735368|gb|EEL85971.1| Valyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 867

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 55/145 (37%), Gaps = 17/145 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y     D    G D+IF      I Q           ++ IH    + 
Sbjct: 451 GWPDEDSADFKRY--YSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDE 508

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   +++E        + A  +R  +       + + F+++++     
Sbjct: 509 QGRKMSKSLGNGIDPMDVIE-------KYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN 561

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYN 357
            ++K    S         VL  + +
Sbjct: 562 FINKIWNASR-------FVLMNMDD 579


>gi|229134705|ref|ZP_04263514.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648751|gb|EEL04777.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
          Length = 921

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ +GRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGDGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-----TVSA-- 364
               Y+  +  +   L +   +  K   T           L    +D N        A  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFNPSENTVPVAEL 672

Query: 365 -------IQALHKL---ARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                  +  L+ L    +++ + +D   +++A  +   I++   +L+
Sbjct: 673 REVDRYMLVKLNDLITKVKDAYETYDFAAVYHAIHNFCTIDLSSFYLD 720


>gi|167771410|ref|ZP_02443463.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
 gi|167666050|gb|EDS10180.1| hypothetical protein ANACOL_02776 [Anaerotruncus colihominis DSM
           17241]
          Length = 945

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +  H   ++ EGRKMSKS GN +  +E+ +        + A ++RL +
Sbjct: 593 SVAWKGVAPYKTVCTHGWVVDGEGRKMSKSLGNGMEPSEITD-------QYGADILRLWV 645

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               Y   I  +   L +   +  K   T+ 
Sbjct: 646 ASADYHADIRISKDILKQLSEVYRKIRNTAR 676


>gi|58038507|ref|YP_190471.1| methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
 gi|58000921|gb|AAW59815.1| Methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
          Length = 516

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I  DVL R  R    E           +        + E  ++    
Sbjct: 19  VNGAPHIGHAYTSIAADVLARFHRLNGEEVLF--------VSGTDEHGQKVEQTAVAKGM 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + +  F +   +   ++     R T   H      L + +  +GH Y    E 
Sbjct: 71  DPQAYADEVSASFRQ-MQKDMAISTDEFIRTTEERHKGAAKALWEKVAANGHIYLGAYEG 129

Query: 153 IFDTS 157
            + T 
Sbjct: 130 WYSTR 134



 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G ++   H     A    A  I+   +++ H G+  +EG KMSKS GN +    L
Sbjct: 261 DVHIVGKEIARFHCVYWPAFLMAA-GIDLPKSVFAH-GWWTVEGEKMSKSLGNVLDPKAL 318

Query: 292 LETKKFGGRSWPAPVIRLAML 312
            +             +R  ++
Sbjct: 319 ADEFGL-------DALRFFLM 332


>gi|332077557|gb|EGI88018.1| anticodon-binding domain protein [Streptococcus pneumoniae GA41301]
          Length = 434

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 210 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 262

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 263 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANKED 320

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 321 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 380

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 381 KGKVRA-KLMVAKDISREELQE--IALADEK 408


>gi|296876999|ref|ZP_06901043.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296432034|gb|EFH17837.1| valine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 883

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    S     Y   
Sbjct: 424 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|17987270|ref|NP_539904.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|17982947|gb|AAL52168.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
          Length = 544

 Score = 45.2 bits (106), Expect = 0.024,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 48  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 99

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +         +  Q ++ +G  Y+      +  
Sbjct: 100 LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQVIWQAMVANGDIYKGGYAGWYSV 158

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 159 RDEAYYGE 166



 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 316 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 367

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 368 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 427

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 428 ARKAM-DDQALHLALGAIFAVVAEANR 453


>gi|212638274|ref|YP_002314794.1| leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|226731223|sp|B7GK53|SYL_ANOFW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212559754|gb|ACJ32809.1| Leucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 805

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 19/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++E+         A  +RL  M M      I ++ + L  A   L + W    
Sbjct: 583 NVVNPDDIVESHG-------ADTLRLYEMFMGPLEASIAWSTKGLDGARRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G ++P ++     D  T+   +  H+  ++ T++++ L    A + ++
Sbjct: 636 EENGELNPKIVDNPETD--TLE--RVYHQTVKKVTEDYEALRFNTAISQLM 682


>gi|148926180|ref|ZP_01809865.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845351|gb|EDK22444.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 530

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  +  D L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 92  --INDAISIITSKNTQQFVKDTTR 113
             +++ +         +++ D  +
Sbjct: 171 SILHENVEYPEQYYKGEYIADLAK 194


>gi|138896204|ref|YP_001126657.1| valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196250160|ref|ZP_03148854.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
 gi|134267717|gb|ABO67912.1| Valyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|196210344|gb|EDY05109.1| valyl-tRNA synthetase [Geobacillus sp. G11MC16]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 540 ID-------QYGADALRYFLATGS--SPGQDLRFSTEKVEATWNFANKIWNASR 584


>gi|153823935|ref|ZP_01976602.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
 gi|126518546|gb|EAZ75769.1| isoleucyl-tRNA synthetase [Vibrio cholerae B33]
          Length = 877

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|88603864|ref|YP_504042.1| valyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|88189326|gb|ABD42323.1| valyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 865

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 25/184 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I ++      +    I ++   L  +G KMSKS GN     E+LE        + A  +R
Sbjct: 497 ILRAVSLTGGKPWEQILVNGMVLGEDGFKMSKSRGNVTVPEEILE-------QYGADSLR 549

Query: 309 -LAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSA-- 364
             A L       I F    +  A   L+K W  +  +   +D A   A  +   T  A  
Sbjct: 550 QWAALGAATGSDIQFNWNDVVAANRFLTKMWNISRFALMQLDRAQYKA--DAQVTALADR 607

Query: 365 --IQALHKLARESTKNHD------LLPIFNASA-HILG---IEVCKEHLNKNISIAIEKL 412
             +  L +  R+ +++ +       L      A  +L    IE+ K  L  +        
Sbjct: 608 WLLTKLSQTVRDVSESLETYQFDKALKAIREFAWDVLADNYIEIVKGRLYSDSDTRDGAC 667

Query: 413 VQER 416
           V  R
Sbjct: 668 VAIR 671


>gi|85708668|ref|ZP_01039734.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
 gi|85690202|gb|EAQ30205.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
          Length = 525

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 45/145 (31%), Gaps = 24/145 (16%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  DV+ R  R    E     VR  T  D+  ++ AR+             
Sbjct: 22  PHIGHAYEGIAADVIARFQRLKGRE-----VRFQTGTDEHGLKMARKAEEQ---GRTPRD 73

Query: 99  ITSKNTQQFVKDTTRLAC--------LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
           +  + +  F +    L          + P H  RA+  I +       +   G  Y    
Sbjct: 74  LADEMSGYFREMDEALNIDFDRFIRTVEPEHH-RASQAIWE------RMEAAGDLYLDRY 126

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKM 175
           E  +       Y   S     E + 
Sbjct: 127 EGWYSVR-DEAYYDESELVEGEGEQ 150


>gi|322390802|ref|ZP_08064312.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321142472|gb|EFX37940.1| leucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 833

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 41/213 (19%), Positives = 71/213 (33%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVADNNGALDKVYNETVKAVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI---------------------SIAIEKLVQER 416
             D L +  A   I  I     HL + +                     S  IE  ++  
Sbjct: 718 -EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLIEDEIEIV 776

Query: 417 LILL---KMKKFSSADYIRKQLESKGFILEDYK 446
           + +    + K   + D  R++L+     L D K
Sbjct: 777 VQIKGKVRAKLMVAKDLSREELQE--VALSDEK 807


>gi|303257732|ref|ZP_07343744.1| isoleucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302859702|gb|EFL82781.1| isoleucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 966

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +GRKMSKS GN I  +E+          + A ++RL + 
Sbjct: 620 CAIDGRAPYKGLLTHGFTVDEQGRKMSKSLGNVIAPSEI-------NDKYGAEILRLWVA 672

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            + Y   I    + L        ++  T
Sbjct: 673 SSDYTGEISLGEKILKGTVDAYRRFRNT 700


>gi|260771783|ref|ZP_05880701.1| isoleucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260613075|gb|EEX38276.1| isoleucyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 948

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 582 SVAMKGKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 635 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|135181|sp|P11931|SYV_BACST RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|143797|gb|AAA22879.1| valyl-tRNA synthetase [Geobacillus stearothermophilus]
          Length = 880

 Score = 45.2 bits (106), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 540 ID-------QYGADALRYFLATGS--SPGQDLRFSTEKVEATWNFANKIWNASR 584


>gi|148994596|ref|ZP_01823738.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|168489731|ref|ZP_02713930.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|147927126|gb|EDK78164.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|183571788|gb|EDT92316.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332075921|gb|EGI86388.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 54/212 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANK-E 718

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKLVQ 414
           D L +  A   +  I     HL + +                            IE +VQ
Sbjct: 719 DKLYVDYAKGFVQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVVQ 778

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  +   K   + D  R++L+     L D K
Sbjct: 779 IKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|148654314|ref|YP_001274519.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|148566424|gb|ABQ88569.1| valyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +++H    + +GRKMSK+ GN +   +++E          A  +R  + 
Sbjct: 520 CYLTGKTPFHTVYLHGLVRDKDGRKMSKTYGNVVNPLDVIEQHG-------ADALRFMLA 572

Query: 313 MTHYREP---IDFTVQRLTEAEILLSK 336
            +    P   ++   +R+  A    +K
Sbjct: 573 TSS--SPGQDLNLNPERIEAARNFANK 597


>gi|331000983|ref|ZP_08324619.1| isoleucine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
 gi|329569758|gb|EGG51522.1| isoleucine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
          Length = 956

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +GRKMSKS GN I  +E+          + A ++RL + 
Sbjct: 610 CAIDGRAPYKGLLTHGFTVDEQGRKMSKSLGNVIAPSEI-------NDKYGAEILRLWVA 662

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            + Y   I    + L        ++  T
Sbjct: 663 SSDYTGEISLGEKILKGTVDAYRRFRNT 690


>gi|315452888|ref|YP_004073158.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131940|emb|CBY82568.1| leucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 804

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRL 327
           G +   G KMSKS GN ++  E++E        + A + RL +  +    + +D+  + L
Sbjct: 564 GMVLKNGAKMSKSKGNVVSPQEIVE-------KYGADIARLYIHFVAPPNKELDWNDKAL 616

Query: 328 TEAEILLSKWPQTS 341
             +   + ++ + S
Sbjct: 617 EGSARFIRRFYEKS 630



 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 11/102 (10%)

Query: 17  EFQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
            F+ +   S  + Y+     Y     H+G+ R   + D L R  R       V +     
Sbjct: 22  VFEPLKDFSKSKKYILSMFPYPSGAIHMGHVRNYAIGDALARYYRQVGYN--VLHPMGFD 79

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                    A      I         T +N  +  ++   L 
Sbjct: 80  AFGMPAENAA------IQYGIHPKQWTYENISKMREEFKALG 115


>gi|254421177|ref|ZP_05034895.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196188666|gb|EDX83630.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 868

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 44/158 (27%), Gaps = 16/158 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R+ R       V +              A      I  
Sbjct: 44  PYPSGDLHMGHVRNYTITDVVARVRRMQGYN--VLHPMGWDAFGLPAENAA------IKR 95

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T KN  Q       L  L+          +P      Q         G AY+ 
Sbjct: 96  GVPPADWTLKNIAQMRDQLKALG-LSYDWNLEVATCLPNYYRWTQWIFLQFFESGLAYQK 154

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              + +D          +  ++D +    R   K  +K
Sbjct: 155 EAAVNWDPIDQT---VLANEQVDSEGRSWRSGAKVERK 189


>gi|119713210|gb|ABL97278.1| leucyl-tRNA synthetase [uncultured marine bacterium EB0_50A10]
          Length = 500

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 15/125 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 206 PVDLYIGGIEHAILHLLYSRFFHKALRDMDMVEGNEPFKKL-LTQGMVLKDGAKMSKSKG 264

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +     +E        + A  +RL M+      + ++++   +  A   + K      
Sbjct: 265 NTVDPQSYIE-------KYGADTVRLYMMFTAPPEQSLEWSESSVEGASRFIKKVYNLVI 317

Query: 343 SKGII 347
            K  I
Sbjct: 318 DKTFI 322


>gi|303239683|ref|ZP_07326208.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302592854|gb|EFL62577.1| valyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 883

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 83/219 (37%), Gaps = 33/219 (15%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I         E    ++IH    + +GRKMSKS GN I   E+
Sbjct: 482 DVLVTGYDIIFFWVARMIFSGLEHMEKEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEV 541

Query: 292 LETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP 349
           +E        +    +R A+ + T     + F+ +++  +    +K W  +       D 
Sbjct: 542 IE-------QYGTDALRFALTIGTSPGNDLRFSSEKVESSRNFANKIWNASRFVLMNFDE 594

Query: 350 AVLSALYN--DLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCK--EHLNK 403
            +  +  +    N+     +  ++ L +E T+N D           LGI + K  E + +
Sbjct: 595 NIDFSKVDSTKFNSADKWILSRVNSLTKEVTENMDKFE--------LGIALQKIYEFIWE 646

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
                  +LV+ RL       +   D  R       ++L
Sbjct: 647 EFCDWYIELVKPRL-------YDREDSSR---LEAQYVL 675


>gi|237753349|ref|ZP_04583829.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229375616|gb|EEO25707.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 539

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 60/335 (17%), Positives = 105/335 (31%), Gaps = 84/335 (25%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           PT     HIG+AR  +  D L R+ R+        Y  N  D   +I +  +       +
Sbjct: 120 PT--GPLHIGHARGAVFGDSLARIGRFLGYTIHTEYYIN--DAGAQIQKLGKSIYYAGRA 175

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-----------PQMIYLIQN 138
           +  +++  + +     ++V +     C            +            +M+  I++
Sbjct: 176 LVFSESRELPSECYQGEYVFELAE--CARAELGESVFESLESLEKLSVFGKDKMLLEIKS 233

Query: 139 IILH-GHA---YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
            +   G     Y +  E+     S           ++  K    V E  +K       LW
Sbjct: 234 NLAQVGIVFDSYVSERELFSQLDST----------LESLKAHNGVYESENK-------LW 276

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI--HGGGLDLIFPHHENEIAQS 252
            +ST      E      R           + YL    DI  H    +  F H+ N     
Sbjct: 277 LKSTEFGD--EKDRVIVRESG-------EATYLAG--DIIYHKNKFERGFSHYIN----I 321

Query: 253 CCADRIEKTANIWIHNGFLNLEGRK-------------------MSKSNGNFITINELLE 293
             AD     A +     +L  + +K                   MSK  GNFI + ++++
Sbjct: 322 WGADHHGYIARVKAALEYLGFDSQKLEVLLAQMVALLKDGIPFKMSKRAGNFILMKDVVD 381

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
                     A  +RL  L       ++F V+ L 
Sbjct: 382 EVG-------ADALRLMFLSKKPDTHLEFDVELLK 409


>gi|242309306|ref|ZP_04808461.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239524347|gb|EEQ64213.1| leucyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 812

 Score = 44.8 bits (105), Expect = 0.025,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 17/91 (18%)

Query: 265 WIH---NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP-- 319
           ++H    G +  +G KMSKS GN +   E++E        + A   RL +L      P  
Sbjct: 563 FLHLLTQGMVTKDGAKMSKSKGNVVDPQEIIE-------QYGADTARLFILFA---APPV 612

Query: 320 --IDFTVQRLTEAEILLSKWPQTSTSKGIID 348
             +++    L  A   + +      +   ++
Sbjct: 613 RELEWNDSALEGAFRFIKRLSAKIENASKME 643


>gi|294011648|ref|YP_003545108.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292674978|dbj|BAI96496.1| methionyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 520

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 70/222 (31%), Gaps = 54/222 (24%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------THY-- 316
             +GFL   G KMSKS GN     EL E        +    +R  +L          Y  
Sbjct: 291 FGHGFLLNRGEKMSKSLGNVADPMELAER-------FGVDQLRYFLLSEVTFGNDGSYSA 343

Query: 317 -------REPIDFTVQRLTE------AEILLSKWPQTSTSK---------GIIDPAVLSA 354
                     +  +   L +      A+ L  + P+T+            G       +A
Sbjct: 344 EAIVARSNSDLANSFGNLAQRTLSFIAKNLEGRLPETAAQDVDRDLLATVGEAARTFQAA 403

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHIL--GIEVCKEHLN 402
           +  DL   +AI+A  +         D                A    L   I      + 
Sbjct: 404 MA-DLAPSTAIEAWMRAVFACNAYIDAQAPWTLRKTDPARMEAVLATLYEAIADLAIVIQ 462

Query: 403 KNISIAIEKLVQERLILLKMKKFSS--ADYIRKQLESKGFIL 442
             I  +   L+++  I    + +++  +D+   +L + GF L
Sbjct: 463 PIIPASAAALLEQMGIAEDGRSYAAIGSDWY-ARLRASGFTL 503



 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 38/132 (28%), Gaps = 23/132 (17%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    +         T  D+  ++ A+              
Sbjct: 18  PHIGHAYEVIATDAIARFQRMMGRDVFFQ-----TGTDEHGLKMAQTARSRDME---PRA 69

Query: 99  ITSKNTQQFVKDTTRLAC--------LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
           +  + +  F      L            P H  RA+  I       Q +  +G  Y    
Sbjct: 70  LADEMSGYFRAMNDGLNISYDRFIRTSEPDHH-RASQAIW------QAMEANGDLYLGRY 122

Query: 151 EIIFDTSSIPNY 162
           E  +       Y
Sbjct: 123 EGWYSVRDEAFY 134


>gi|284928634|ref|YP_003421156.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
 gi|284809093|gb|ADB94798.1| Isoleucyl-tRNA synthetase [cyanobacterium UCYN-A]
          Length = 960

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   + I     +  H   L+ +GRKMSKS GN I  + ++       +   + A V+RL
Sbjct: 585 SVAVNGIAPYKTVLTHGFVLDQQGRKMSKSLGNVINPDVIINGGNNKKKEPAYGADVLRL 644

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   T+ 
Sbjct: 645 WVSSVDYSSDVLVGETILKQISDVYRKIRNTAR 677


>gi|225858106|ref|YP_002739616.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782515|sp|C1CB31|SYL_STRP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225722073|gb|ACO17927.1| leucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 71/211 (33%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +   SK I+                AV   + +   NT  AI  L      + K  
Sbjct: 662 DRVYRLIRSKEIVAENNGALDKVYNETVKAVTEQIDSLKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVTWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|15646031|ref|NP_208213.1| isoleucyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|3024677|sp|P56456|SYI_HELPY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2314596|gb|AAD08464.1| isoleucyl-tRNA synthetase (ileS) [Helicobacter pylori 26695]
          Length = 920

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN +++++LL+T         + V+RL 
Sbjct: 584 IGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDKLLKTHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y+  +  +    T+ E    K+  T
Sbjct: 637 VAFNDYQNDLRVSQTFFTQTEQHYKKFRNT 666


>gi|225852500|ref|YP_002732733.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256113542|ref|ZP_05454368.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|256264009|ref|ZP_05466541.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|265994915|ref|ZP_06107472.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|225640865|gb|ACO00779.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|262766028|gb|EEZ11817.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|263094153|gb|EEZ18075.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326409016|gb|ADZ66081.1| methionyl-tRNA synthetase [Brucella melitensis M28]
 gi|326538726|gb|ADZ86941.1| methionyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 515

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +         +  Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQVIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|89899568|ref|YP_522039.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|123091480|sp|Q220P5|SYL_RHOFD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89344305|gb|ABD68508.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 892

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D S  + Y C    Y     H+G+ R   + D+L R LR       +          
Sbjct: 26  VTEDSSKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYNVLMPMGW------ 79

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D     A  E+ ++      +  T +N     +    +  LA           P      
Sbjct: 80  DAFGLPA--ENAALKNGVPPAQWTFENIAYMKQQMQAMG-LAIDWSREVATCDPSYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLDKGIAYRKTQVVNWD 159


>gi|322377200|ref|ZP_08051692.1| leucine--tRNA ligase [Streptococcus sp. M334]
 gi|321281913|gb|EFX58921.1| leucine--tRNA ligase [Streptococcus sp. M334]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 54/212 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANK-E 718

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKLVQ 414
           D L +  A   +  I     HL + +                            IE +VQ
Sbjct: 719 DKLYVDYAKGFVQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVVQ 778

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  +   K   + D  R++L+     L D K
Sbjct: 779 IKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|319786583|ref|YP_004146058.1| isoleucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
 gi|317465095|gb|ADV26827.1| isoleucyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
          Length = 948

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 7/123 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           + +    LGK  D++  G D      ++ +      D+         H   ++  GRKMS
Sbjct: 561 AVLLERGLGKPADLYLEGSDQHRGWFQSSLLTGVAIDKAAPYRQCLTHGFTVDEHGRKMS 620

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN I   ++++T         A ++RL +    Y   +  + + L        +   
Sbjct: 621 KSLGNGIEPQDIMKTLG-------ADILRLWIASADYSNEMSLSQEILKRNADAYRRIRN 673

Query: 340 TST 342
           T+ 
Sbjct: 674 TAR 676


>gi|319778817|ref|YP_004129730.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108841|gb|ADU91587.1| Arginyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 560

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 53/336 (15%), Positives = 99/336 (29%), Gaps = 82/336 (24%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+AR   + D + RLL     +    +  N  D  ++I   A      +  
Sbjct: 131 PT--GPLHVGHARQAALGDCICRLLEAAGYDIYREFYYN--DAGNQINNLASSVQARLKG 186

Query: 93  NDA--ISIITSKNTQQFVKDTTRLA-----CLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
            D              ++ D  R         A   +  A+  + + +  I+       A
Sbjct: 187 IDPDHPDFPADGYRGDYINDIARDFITKETVKADDIEITASGDV-ENLNDIRKFA---VA 242

Query: 146 Y---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPME 201
           Y   E + +++        Y   S    D + +               D  LW R+T + 
Sbjct: 243 YLRREQDLDLLAFNLKFDRYYLESSLYTDGKVEETVNTLTSNGHTYEQDGALWLRTTELG 302

Query: 202 PGWE-----------------------SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
            G +                       + W RG                 K  DI G   
Sbjct: 303 TGDDKDRVMRKSDGTYTYFVPDVAYHKTKWDRGY---------------QKAIDIQGSD- 346

Query: 239 DLIFPHHENEIAQSCCADRI------EKTANIWIH-NGFLNLEGR--KMSKSNGNFITIN 289
                HH   +A+     +       +   +  +H    +   G   K+SK  G+++T+ 
Sbjct: 347 -----HH-GTVARVRAGLQGLNLGIPKDYPSYILHKMVRVMRNGEEVKISKRAGSYVTMR 400

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +L++              R  ++    +   +FT  
Sbjct: 401 DLIDWVGQ-------DATRYFLIQR--KADTEFTFD 427


>gi|257465710|ref|ZP_05630081.1| isoleucyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257451370|gb|EEV25413.1| isoleucyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 938

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATDNKAPYNQVLTHGFTVDEKGRKMSKSLGNVILPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGDTYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|326202019|ref|ZP_08191889.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325987814|gb|EGD48640.1| isoleucyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 929

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S    +      +  H   ++ E RKMSKS GN I   +++       + + A ++RL +
Sbjct: 576 SVATRKGAPYKKVLTHGYVIDEEKRKMSKSLGNGIDPADVI-------KEYGADILRLWV 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             + Y   I  +   L +   +  K   T+ 
Sbjct: 629 ASSDYTTDIKISKDLLKQLSEVYRKIRNTAR 659


>gi|224107153|ref|XP_002314391.1| predicted protein [Populus trichocarpa]
 gi|222863431|gb|EEF00562.1| predicted protein [Populus trichocarpa]
          Length = 981

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 55/142 (38%), Gaps = 7/142 (4%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S          ++  H   L+ +G KMSKS GN +  + ++E  +       + A V+RL
Sbjct: 589 SIATKGKAPYTSVITHGFVLDEKGCKMSKSLGNVVDPHTIIEGGRNSKEAPGYGADVLRL 648

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSAL-YNDLNTVS--A 364
            +    Y   +    Q L +   +  K   T       + D    +A+ YNDL  +   A
Sbjct: 649 WVSSVDYTGDVMIGTQVLRQISDIYRKLRGTLRYLLGNLHDWEAGNAISYNDLPMIDKHA 708

Query: 365 IQALHKLARESTKNHDLLPIFN 386
           +  L  +     +++D    F 
Sbjct: 709 LFQLENVVNTIRESYDNYQFFK 730


>gi|167856258|ref|ZP_02478991.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167852615|gb|EDS23896.1| isoleucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 938

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATDNKAPYNQVLTHGFTVDEKGRKMSKSLGNVILPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGDTYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|332204263|gb|EGJ18328.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|295398837|ref|ZP_06808831.1| leucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294972927|gb|EFG48760.1| leucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 841

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 47/145 (32%), Gaps = 27/145 (18%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTH 315
             E    ++     L     KMSKS GN +  ++++         + A  +RL  M M  
Sbjct: 593 NEEPFQKLYNQGMILGEGNEKMSKSKGNVVNPDDVVN-------QYGADTLRLYEMFMGP 645

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY------------------- 356
               I ++   L  +   L +  +    +       ++ +                    
Sbjct: 646 LDASIAWSENGLEGSRRFLERVWRLLVDENGKMRDRITTMNTGELDKVYHQTVQKVTEDF 705

Query: 357 NDLNTVSAIQALHKLARESTKNHDL 381
           ++L+  +AI  +     E+ K   L
Sbjct: 706 DNLHFNTAISQMMVFVNEANKAESL 730


>gi|222478882|ref|YP_002565119.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451784|gb|ACM56049.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 714

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 45/142 (31%), Gaps = 15/142 (10%)

Query: 17  EFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +F   DP+ +    CG P      HIG+ R  +  DV  R L     E    +V      
Sbjct: 5   DFPTDDPAVV---TCGLPYANGDLHIGHLRTYVGGDVYRRALERLGQE--TAFVSGSDMH 59

Query: 76  DDKIIERARQEH--PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
              +   A QE   P     D      +   + F  +               T       
Sbjct: 60  GTPVAVNAEQEGVSPEQFALDWHEQYAATFPK-FNVEFDNYGHTHDETNTAVTQ------ 112

Query: 134 YLIQNIILHGHAYEANNEIIFD 155
            L++++   GH YE    + +D
Sbjct: 113 QLVRDLDEGGHLYEKEIMVAYD 134



 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 45/201 (22%)

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           WE+ W  G    H E         G    +H  G D+I  H     A     D  E    
Sbjct: 284 WEAAWKEGASDAHPE---------GGEI-VHVIGRDIIQHHTIFWPAMLEATDHTEP--R 331

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDF 322
             + +GF+ L G       G   + +  +   ++    +    +R  +     +++ +DF
Sbjct: 332 AVMASGFVTLGG------KGFSTSRDRAVWADEYLDEGFHPDPLRYYLATNGGFQQDVDF 385

Query: 323 TVQRLTE--------------------AEILLSKWPQTSTSKGIIDPAVLSALYN----- 357
           + ++  +                    A       P    +   +   +  A+ +     
Sbjct: 386 SWEKFRDRVNTELVGTVGNFLYRSLLFAHRNYDDAPIADATSDEVAERIEEAIADFEAAV 445

Query: 358 -DLNTVSAIQALHKLARESTK 377
            D +  +   A+  LAR   +
Sbjct: 446 NDYSVRAVGDAVTDLARFGNE 466


>gi|149011125|ref|ZP_01832430.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764761|gb|EDK71691.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.026,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETDESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|295397317|ref|ZP_06807409.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294974391|gb|EFG50126.1| valine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 887

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 47/126 (37%), Gaps = 18/126 (14%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           N+ IH    + +GRKMSKS GN +   +++   
Sbjct: 491 TGYDIIFFWVARMIFQGLEFTGRRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMDVVN-- 548

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  +       + I +  ++L  A   ++K    S           + 
Sbjct: 549 -----EYGADALRWFLATGSTPGQDIRYNEEKLEAAWNFINKIWNASR---------YAI 594

Query: 355 LY-NDL 359
           +  +DL
Sbjct: 595 MNLDDL 600


>gi|254520460|ref|ZP_05132516.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914209|gb|EEH99410.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 647

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 72/218 (33%), Gaps = 56/218 (25%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +     ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALDLPLPKQVFGH-GWLLVDGGKMSKSKGNVVDPVT 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TS 341
           L+E       ++    +R  +L       I F    L   EI + K             S
Sbjct: 312 LVE-------NFGVDAVRYYLLR-----EIPFGSDGLFNNEIFIKKINSDLCNDLGNLLS 359

Query: 342 TSKGIIDPAV---------LSALY------------------NDLNTVSAIQALHKLARE 374
            +  +I+              A+                   +DL    A++ + +L   
Sbjct: 360 RTVAMIEKYFDGVIPNNNIKEAIDDELISLALETPKKVNKAIDDLRIPEALENIFELIGR 419

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
           + K  D    +  +      E  KE L   +   IE L
Sbjct: 420 ANKYIDETTPWILAKD----EDKKERLGTVLYNLIESL 453



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 11/119 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIGN    +  D L R  R    +         TD   + I+R  +E    P      I+
Sbjct: 20  HIGNTYTTVAADALARYKRLTGYD---VMFLTGTDEHGQKIQRIAEEKGITPKEHVDEIV 76

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +       +KD  ++  ++     R T+  HI  +  + + +   G  Y+++ E ++ T
Sbjct: 77  SG------IKDLWKMMNISYDKFIRTTDDYHIKAVQDIFKKLYDKGDIYKSSYEGLYCT 129


>gi|269859599|ref|XP_002649524.1| leucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
 gi|263511635|sp|B7XHP6|SYLC_ENTBH RecName: Full=Probable leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|220067075|gb|EED44543.1| leucyl-tRNA synthetase [Enterocytozoon bieneusi H348]
          Length = 860

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 1/83 (1%)

Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           +E +    +Y     D+   G DLI  H    +       +          NG L L G 
Sbjct: 493 VEDARSQFNYF-YPIDLRVSGKDLINNHLIFFLMNHVAIFKENNWPKRIYTNGHLLLNGL 551

Query: 277 KMSKSNGNFITINELLETKKFGG 299
           KMSKS GNF++++  LE      
Sbjct: 552 KMSKSEGNFLSVDTALERFGTSA 574


>gi|158337034|ref|YP_001518209.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082318|sp|B0C872|SYI_ACAM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|158307275|gb|ABW28892.1| isoleucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 971

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 6/117 (5%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPV 306
           I  S   +       +  H   L+ +GRKMSKS GN +    ++   K   +   + A V
Sbjct: 576 ILTSVATNGHAPYKTVLTHGFVLDEQGRKMSKSIGNVVDPAIVIAGGKNQKQDPPYGADV 635

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDL 359
           +RL +    Y   +      L +   +  K   TS     +    DPA  +  Y DL
Sbjct: 636 LRLWVSSVDYASDVPLGKNILKQMADVYRKIRNTSRFLLGNLHDFDPAQDAVAYEDL 692


>gi|149192164|ref|ZP_01870384.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148834004|gb|EDL51021.1| isoleucyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 942

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLITSIAMKDEAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|82701645|ref|YP_411211.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123768294|sp|Q2YBQ2|SYL_NITMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82409710|gb|ABB73819.1| leucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 866

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 44/150 (29%), Gaps = 16/150 (10%)

Query: 13  RKITEFQAIDPSNIRMYVC---GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F+A++    R Y C    P      H+G+ R   + DVL R  R       V   
Sbjct: 19  QQTAAFKAVEAPEKRKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYHRMQGYN--VLQP 76

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A      +  N   +  T  N     K    L       +  AT   
Sbjct: 77  MGWDAFGLPAENAA------MQNNVPPAKWTYDNIAYMRKQLQSLGLAMDWDRELAT-CQ 129

Query: 130 PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           P      Q     ++  G AY     + +D
Sbjct: 130 PDYYRWNQWLFLRMLEKGLAYRTTGIVNWD 159


>gi|307711009|ref|ZP_07647431.1| leucyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307616971|gb|EFN96149.1| leucyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 54/212 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKVVTEQIESLKFNT--AIAQLMVFVNAANK-E 718

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKLVQ 414
           D L +  A   +  I     HL + +                            IE +VQ
Sbjct: 719 DKLYVDYAKGFVQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVVQ 778

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  +   K   + D  R++L+     L D K
Sbjct: 779 IKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|332203422|gb|EGJ17489.1| anticodon-binding domain protein [Streptococcus pneumoniae GA47368]
          Length = 437

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 45/215 (20%), Positives = 73/215 (33%), Gaps = 60/215 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 213 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 265

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 266 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNATNKED 323

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 324 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 383

Query: 416 ----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               R  L+  K  S     R++L+     L D K
Sbjct: 384 KGKVRAKLMVAKDLS-----REELQE--IALADEK 411


>gi|256044655|ref|ZP_05447559.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564001|ref|ZP_05834487.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265991079|ref|ZP_06103636.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|25009373|sp|Q8YH17|SYM_BRUME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|260154017|gb|EEW89109.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263001863|gb|EEZ14438.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 515

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +         +  Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQVIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|148549871|ref|YP_001269973.1| leucyl-tRNA synthetase [Pseudomonas putida F1]
 gi|148513929|gb|ABQ80789.1| leucyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 906

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++E       ++ A   RL M+      P    ++++   +  A 
Sbjct: 664 EKMSKSKNNGVDPQSMIE-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 713

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +  Q   S+G+     ++AL +    +   +A+H   ++++ +      FN A
Sbjct: 714 RFLRRVWRLAQAHVSQGLPGKLDVAALDDAQKVIR--RAIHAAIKQASTDVGQFHKFNTA 771

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            A ++ +    E   +        L+QE L  
Sbjct: 772 IAQVMTVMNVLEKAPQATEQD-RALLQEGLEA 802



 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 37/143 (25%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
               P     Y      Y     H+G+ R   + DV+ R  R     K V          
Sbjct: 64  VTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFG 121

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N A +  T +N          L  LA       T   P      
Sbjct: 122 MPAENAA------MKNNVAPAKWTYENIDYMKTQLKSLG-LAIDWAREVTTCKPDYYRWE 174

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     +   G  Y  N  + +D
Sbjct: 175 QWLFTRLFEKGIIYRKNGTVNWD 197


>gi|307709947|ref|ZP_07646394.1| leucyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619318|gb|EFN98447.1| leucyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 54/212 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKSVTEQIESLKFNT--AIAQLMVFVNAANK-E 718

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKLVQ 414
           D L +  A   +  I     HL + +                            IE +VQ
Sbjct: 719 DKLYVDYAKGFVQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVVQ 778

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  +   K   + D  R++L+     L D K
Sbjct: 779 IKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|149006009|ref|ZP_01829738.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762365|gb|EDK69326.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332076703|gb|EGI87165.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|87124459|ref|ZP_01080308.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86168031|gb|EAQ69289.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 876

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R  ++ DV+ R  R       V +              A      I      +  
Sbjct: 64  HMGHVRNYVITDVIARAQRMRG--DAVLHPMGWDAFGLPAENAA------IERGVNPADW 115

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T +N  Q      RL       + +AT H        Q     +   G AY+    + +D
Sbjct: 116 TDRNIAQMKAQLNRLGLSIDWEREQATCH-DDYYRWTQWLFLELHAGGLAYQKEATVNWD 174


>gi|309799377|ref|ZP_07693619.1| leucyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116992|gb|EFO54426.1| leucyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 424

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 200 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 252

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 253 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 308

Query: 378 NHDL 381
              L
Sbjct: 309 EDKL 312


>gi|301793524|emb|CBW35899.1| leucyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 71/211 (33%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +   SK I+                AV   + +   NT  AI  L      + K  
Sbjct: 662 DRVYRLIRSKEIVAENNGALDKVYNETVKAVTEQIDSLKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVTWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|304316504|ref|YP_003851649.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302778006|gb|ADL68565.1| valyl-tRNA synthetase [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
          Length = 878

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I  S    +      + IH    + +GRKMSKS GN I   E+
Sbjct: 479 DVLVTGYDIIFFWVARMIFMSLEFMKEVPFKRVLIHGLVRDSQGRKMSKSLGNGIDPLEI 538

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +E        + A  +R  ++  +   P   + F+  +L  +    +K    S    +  
Sbjct: 539 IE-------KYGADTLRFTLITGN--APGNDMRFSDDKLEASRNFANKLWNASRYVMLNL 589

Query: 349 PAVLSALY-NDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHI 391
            +  + LY  +LN      +  L+ + +E T+N +   +  A+  +
Sbjct: 590 TSDDTTLYLENLNIADKWILTRLNNVVKEVTENLEKYELGIAAGKL 635


>gi|222825097|dbj|BAH22254.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Cadra
           cautella]
          Length = 143

 Score = 44.8 bits (105), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV  R ++     K V +     +   KI + A+ +        
Sbjct: 16  VNDKPHIGHAYTSLICDVTARFVKLAG--KNVKFTTGTDEHGQKIEKAAKTKGIEPKEFT 73

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +T +   +       L         R T   H   +I L   +   G  Y  +   
Sbjct: 74  DEISVTFRKLAE-------LMNFNSDDFIRTTEERHEQAVIALWNRLEERGQIYLDSYSG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAFY 136


>gi|326928784|ref|XP_003210554.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Meleagris
           gallopavo]
          Length = 1164

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 56/163 (34%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     D+ EK       NG L L   KMSKS 
Sbjct: 652 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWS--DQREKWPVAVRANGHLLLNSEKMSKST 709

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 710 GNFLTLTQAVD-------KFSADGMRL----------------ALADAGDTVE------- 739

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 740 -----DANFVEAMAD-----AGILRLYTWVEWVKEMIANRDSL 772


>gi|319405650|emb|CBI79273.1| Methionyl-tRNA synthetase [Bartonella sp. AR 15-3]
          Length = 513

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   IV D L R  +           +N+  +        + +  +  +N 
Sbjct: 14  PNSAPHIGHAYNAIVSDALARFQKADG--------KNVFFLSGTDEHGLKMQQTAQMLNM 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N+  F K    L C       R T   H      L + +   G  Y      
Sbjct: 66  TPQQLADRNSAVFQKMLAMLNCSNNDF-IRTTEERHHKACQELWKKMEAKGDIYLGCYAG 124

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 125 WYSVRQEAYY 134



 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D+I  H     A    A  IE    I+ H GFL   G KMSKS GN +   E+
Sbjct: 257 DIHIIGKDIIRFHAVYWPAFLMSA-GIELPKRIFAH-GFLLNRGAKMSKSVGNVVDPFEM 314

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +E        +    +R   L
Sbjct: 315 VER-------YGLDQVRYFFL 328


>gi|283954655|ref|ZP_06372173.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283793847|gb|EFC32598.1| leucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 688

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 38/89 (42%), Gaps = 9/89 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
            + E    + +  G +  +G KMSKS GN +  +E++E        + A   RL +L   
Sbjct: 438 TQDEPFNRL-LTQGMVLKDGAKMSKSKGNVVDPDEIIE-------KYGADTARLFILFAA 489

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTS 343
              + +++    +  +   + K+   + +
Sbjct: 490 PPAKELEWNDDAVEGSYRFICKFYDRAQN 518


>gi|116074843|ref|ZP_01472104.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
 gi|116068065|gb|EAU73818.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
           sp. RS9916]
          Length = 882

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 46/158 (29%), Gaps = 16/158 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R       V +              A      I  
Sbjct: 56  PYPSGSLHMGHVRNYVITDVIARVQRMRG--DAVLHPMGWDAFGLPAENAA------IER 107

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                + T  N  Q      RL       + +AT H        Q     +   G AY+ 
Sbjct: 108 GIDPGVWTDHNIGQMRDQLGRLGLSIDWTREQATCH-DDYYRWTQWLFLELQQGGLAYQK 166

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             ++ +D          +  ++D      R      K+
Sbjct: 167 EAQVNWDPIDQT---VLANEQVDADGKSWRSGAVVEKR 201


>gi|16804058|ref|NP_465543.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501180|ref|ZP_03669487.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508283|sp|Q8Y5N8|SYI_LISMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16411472|emb|CAD00097.1| isoleucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|302390850|ref|YP_003826670.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302202927|gb|ADL11605.1| methionyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 644

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 43/226 (19%), Positives = 79/226 (34%), Gaps = 49/226 (21%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    AD       ++ H GFL +EG KMSKS GN +   +L
Sbjct: 254 DVHIVGKDILRFHTIIWPAILMAADMELP-KQVFGH-GFLTVEGGKMSKSKGNVVDPTKL 311

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THYREP-----------------IDFTVQRL 327
           +         +    +R  ++          Y                    ++ TV  +
Sbjct: 312 VND-------FGVDAVRYYLMREVAFGTDGSYSTESFIRRINSDLANDLGNLLNRTVAMV 364

Query: 328 TEAEILLSKWPQTSTSKGI----IDPAVLSALYND---LNTVSAIQALHKLARESTKNHD 380
            +    +   P++ T             L+A+ +D   L   +A++ L  + R + K  D
Sbjct: 365 EQYFDGVIPEPRSETEYDADLKKTSQQELAAMADDMENLQFSTALEHLWTVIRRTNKYID 424

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE-RLILLKMKKF 425
               +        I    E     +   +  L++  R+  + +K F
Sbjct: 425 QTTPW--------ILAKDEDKQDKLGTVLYNLLEALRITAIALKPF 462


>gi|313623007|gb|EFR93300.1| isoleucine--tRNA ligase [Listeria innocua FSL J1-023]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|304385268|ref|ZP_07367613.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304328475|gb|EFL95696.1| valine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 887

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 17/156 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    Y      +   G D+IF      I QS          ++ +H    + 
Sbjct: 469 GWPDENAADFKRYFPTSTLV--TGYDIIFFWVARMIFQSLKFTGKRPFKDVLLHGLIRDE 526

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   ++++        + A  +R  +    T   + + F+  ++  A 
Sbjct: 527 QGRKMSKSLGNGIDPMDVID-------KYGADALRWFLSNGSTA-GQDLRFSYTKMDAAW 578

Query: 332 ILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS 363
             ++K    S     +   +D   L AL   LN   
Sbjct: 579 NFINKIWNASRYVIMNLDQVDKPQLPALNE-LNLAD 613


>gi|24380292|ref|NP_722247.1| leucyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|32171544|sp|Q8DS85|SYL_STRMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24378305|gb|AAN59553.1|AE015018_7 putative leucyl-tRNA synthetase [Streptococcus mutans UA159]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +        + + G +D             L A+    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKEIAAKNNGHLDKVYNEVVKTVTEHLEAMR--FNT--AISQLMIFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EEQL 721


>gi|15678615|ref|NP_275730.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3122905|sp|O26687|SYM_METTH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2621666|gb|AAB85093.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 651

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 39/124 (31%), Gaps = 17/124 (13%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GPT     H+G+ R   I  D+  R  R       V +V    +    I  +A  E 
Sbjct: 12  YANGPT-----HLGHLRSTYIPADIYARYRRLRG--DDVLFVCATDEHGTPIAVKAEAE- 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY--LIQNIILHGHA 145
                      + ++  +    D  R    +     R T+ +   I       +   G  
Sbjct: 64  -----GRTPLEVATRYHEMIRGDLERCDI-SFDSFTRTTDELHHEIAQKFFLKLYEKGFI 117

Query: 146 YEAN 149
           YE +
Sbjct: 118 YEKD 121


>gi|126649711|ref|ZP_01721947.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126593430|gb|EAZ87375.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.028,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + +     +  H   L+ EGRKMSKS GN I   ++++        + A ++RL +
Sbjct: 567 SVAINGLAPYKGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMD-------QYGADILRLWV 619

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   +  ++  L +   +  K   T
Sbjct: 620 ASVDYTADVRISMDMLKQVSEVYRKIRNT 648


>gi|322701499|gb|EFY93248.1| leucyl-tRNA synthetase [Metarhizium acridum CQMa 102]
          Length = 962

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 51/184 (27%), Gaps = 24/184 (13%)

Query: 13  RKITEFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
                           YV    P      H+G+ R   + D + R  R    +  +    
Sbjct: 71  GAKQPNSPRTGDRKTNYVLPMFPYPSGSLHLGHLRVYSIADTVARYHRLKGDDVLLPMGW 130

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QPRA-TNH 128
              D      E A  E           + T +N ++  +   +L  +  +    R  T  
Sbjct: 131 ---DAFGLPAENAALER-----GIDPGVWTRRNIKKMKE---QLGFMNGSWDWSRELTAC 179

Query: 129 IPQMIYLIQN----IILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            P+     Q     +   G AY+A  E+              +  ++D      R   K 
Sbjct: 180 DPEFYKHTQKLFLMLHERGLAYQAEAEVNYDPVDKT----VLANEQVDANGCSWRSGAKV 235

Query: 184 HKKN 187
            K+ 
Sbjct: 236 EKRK 239


>gi|317148825|ref|XP_001822941.2| leucyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 948

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 46/155 (29%), Gaps = 22/155 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +     D      E A  E    P       I
Sbjct: 59  HMGHLRVYTISDVLARFYRMRGHE--VLHPMGW-DAFGLPAENAAIERGIDPAEWTKDNI 115

Query: 100 TSKNTQQ------FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI- 152
                Q       F  D   LA  AP        H  ++  +   +   G AY+A   + 
Sbjct: 116 ARMKEQLRSISTSFDWDRE-LATCAPEFY----EHTQRIFLM---LYKKGLAYQAEALVN 167

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                        +  ++D      R   K  K N
Sbjct: 168 YDPVDKT----VLANEQVDANGFSWRSGAKVEKLN 198


>gi|313618002|gb|EFR90151.1| isoleucine--tRNA ligase [Listeria innocua FSL S4-378]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|315283055|ref|ZP_07871330.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
 gi|313613297|gb|EFR87166.1| isoleucine--tRNA ligase [Listeria marthii FSL S4-120]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|227550269|ref|ZP_03980318.1| leucine--tRNA ligase [Enterococcus faecium TX1330]
 gi|227180594|gb|EEI61566.1| leucine--tRNA ligase [Enterococcus faecium TX1330]
          Length = 837

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 556 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 615

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 616 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 668

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 669 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 723

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 724 DALPYEYIEGFVQ 736


>gi|222151545|ref|YP_002560701.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222120670|dbj|BAH18005.1| valyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 875

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I Q           ++ IH      +GRKMSKS GN +   +++
Sbjct: 474 VLVTGYDIIFFWVARMIFQGLEFTGKRPFDDVLIHGLVRAEDGRKMSKSLGNGVDPMDVI 533

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +        + A  +R  +       P   + ++ +++  A   ++K    S 
Sbjct: 534 D-------QYGADSLRYFLATGS--SPGQDLRYSTEKVEAAWNFINKIWNASR 577


>gi|163791284|ref|ZP_02185698.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873425|gb|EDP67515.1| valyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 877

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      + QS          N+ IH    + 
Sbjct: 459 GWPDEESEDFKRYFPTNTLV--TGYDIIFFWVSRMMFQSLEFTGKRPFNNVLIHGLIRDT 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   +++E        + A  +R  +        + + F+  ++  A 
Sbjct: 517 EGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYDKMDAAW 568

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 569 NFINKIWNASR 579


>gi|126348547|emb|CAJ90271.1| conserved hypothetical protein [Streptomyces ambofaciens ATCC
           23877]
          Length = 261

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 40/106 (37%), Gaps = 18/106 (16%)

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSALYND 358
           RLA+L  H+   ++     L EA   L++W +              G +   +  A  +D
Sbjct: 155 RLALLSHHHHTRVELGASALDEARDTLARWRRAVARWARQPSRPVPGEVRDRLRDAWEDD 214

Query: 359 LNTVSAIQALHKLARESTKNHDL-----LPIFNASAHILGIEVCKE 399
           L+    ++ L    R    + DL        +  +   LG+ + ++
Sbjct: 215 LDAPGVLRVL----RRVEDDPDLPDGVRFETYAYADRFLGLHLARD 256


>gi|119477447|ref|ZP_01617638.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119449373|gb|EAW30612.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 825

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 37/137 (27%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-AMLMTHYREPIDFTVQRL 327
           G +  +G KMSKS GN +   E++E        + A  +RL  M      + ++++   L
Sbjct: 576 GMVLKDGTKMSKSKGNTVDPQEMIE-------QYGADSVRLSIMFAAPPEQSLEWSDSAL 628

Query: 328 TEAEILLSKW-----------PQTSTSKGIIDP----------AVLSALYND------LN 360
             A   L +                 +   +D             ++ + +D       N
Sbjct: 629 GGAHKFLHRLWGRVYNHLQNAKAPVLNTDSLDKGQQTLRRKLHETIAKVGDDFGRRLTFN 688

Query: 361 TVSAIQALHKLARESTK 377
           T  AI A+ +L  + +K
Sbjct: 689 T--AIAAIMELTNDLSK 703


>gi|47096662|ref|ZP_00234249.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254899283|ref|ZP_05259207.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912578|ref|ZP_05262590.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936904|ref|ZP_05268601.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014984|gb|EAL05930.1| isoleucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609502|gb|EEW22110.1| isoleucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590567|gb|EFF98901.1| isoleucyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|295695843|ref|YP_003589081.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295411445|gb|ADG05937.1| leucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 829

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 36/181 (19%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E      +  G +  EG KMSKS GN ++ ++++         + A   RL +L      
Sbjct: 574 EPF-RHLLTQGMVIKEGAKMSKSKGNVVSPDDIINR-------YGADTARLFILFAAPPD 625

Query: 318 EPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALY------------------ND 358
             +++  Q +  +   L + W   + ++ +        +                    D
Sbjct: 626 RDLEWNDQGVEGSHRFLHRVWRLVNQNREVFHAPAGDRMAPAARDLRRKTHATIKKVTED 685

Query: 359 ------LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
                  NT   I A+ +L             F  +A I  + +       +I   +   
Sbjct: 686 FAQRYTFNT--GISAIMELVNAIYAYPAEADPFTKAAAIRTVLLLLAPAAPHICEELWSQ 743

Query: 413 V 413
           +
Sbjct: 744 I 744



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 31/117 (26%), Gaps = 13/117 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+ R+ R       V +              A Q            + 
Sbjct: 59  HMGHVRVYSIGDVVARVKRMQGYN--VLHPMGWDAFGMPAENAAIQHGVH------PRLW 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI 152
           T +N     +   RL       +   T   P      Q         G AY     +
Sbjct: 111 TYENIDHMRQQQKRLGVSY-DWEREVTTCAPDYYKFTQWMFLLFYHRGLAYRKKAAV 166


>gi|293379073|ref|ZP_06625226.1| leucyl-tRNA synthetase domain protein [Enterococcus faecium PC4.1]
 gi|292642352|gb|EFF60509.1| leucyl-tRNA synthetase domain protein [Enterococcus faecium PC4.1]
          Length = 317

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 36  PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 95

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 96  NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 148

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 149 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 203

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 204 DALPYEYIEGFVQ 216


>gi|282900674|ref|ZP_06308616.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281194474|gb|EFA69429.1| Leucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 860

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 41/143 (28%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y      Y     H+G+ R   + DV+ RL R       V +        
Sbjct: 28  TPQDKNQPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFG 85

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   RL  L+   +              
Sbjct: 86  LPAENAA------IDRGVPPAKWTYQNIDQMRQQLKRLG-LSLDWEAEVATCSSDYYRWT 138

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q      +  G AY+    + +D
Sbjct: 139 QWIFLQFLAAGLAYQKEAAVNWD 161


>gi|226311582|ref|YP_002771476.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782487|sp|C0ZB13|SYL_BREBN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226094530|dbj|BAH42972.1| leucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 805

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 45/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PIDIYIGGAEHAVLHLLYSRFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQT-S 341
           N +  ++++++         A  +R+  M M      I ++ + L  A   L +  +   
Sbjct: 583 NVVNPDDIIDSHG-------ADTLRMYEMFMGPLDASIAWSTKGLDGARRFLDRVYRLFV 635

Query: 342 TSKGIIDPAVLS 353
              G ++  ++ 
Sbjct: 636 GDNGELNEKIVE 647


>gi|168485977|ref|ZP_02710485.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570909|gb|EDT91437.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|146281350|ref|YP_001171503.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|166229760|sp|A4VI60|SYI_PSEU5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145569555|gb|ABP78661.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 943

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 42/108 (38%), Gaps = 11/108 (10%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D       +  H   ++  GRKMSKS GN I   E+ ++         A ++RL +  
Sbjct: 585 AIDGHAPYKGLLTHGFTVDENGRKMSKSLGNVIAPQEITDSMG-------ADILRLWVSA 637

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYN 357
           T Y   +  + Q L  +     +   T+    ++    DPA   A  +
Sbjct: 638 TDYSGEMAVSKQILQRSADAYRRIRNTARFLLSNLDGFDPAQHMAPND 685


>gi|224498530|ref|ZP_03666879.1| isoleucyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|224419223|ref|ZP_03657229.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253826941|ref|ZP_04869826.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313142726|ref|ZP_07804919.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510347|gb|EES89006.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131757|gb|EFR49374.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 521

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           PT     HIG+AR  I+ D L R+ R+        Y  N  D   +I    +        
Sbjct: 108 PT--GPLHIGHARGAILGDSLCRIGRHLGYSITTEYYIN--DAGSQIENLGKSIYYAGRH 163

Query: 90  IPINDAISIITSKNTQQFVKDTTR 113
           +  +D+  +       +++ D  +
Sbjct: 164 LFFDDSYDLPEGCYKGEYILDLAK 187


>gi|217963834|ref|YP_002349512.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|254782418|sp|B8DBR2|SYI_LISMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|217333104|gb|ACK38898.1| isoleucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571595|emb|CAR84774.1| ileS [Listeria monocytogenes L99]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|254831739|ref|ZP_05236394.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|16801193|ref|NP_471461.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526006|sp|Q929Z6|SYI_LISIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|16414641|emb|CAC97357.1| isoleucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|296329050|ref|ZP_06871556.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|296153854|gb|EFG94666.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 636

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 71/435 (16%), Positives = 129/435 (29%), Gaps = 112/435 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +         +V  + +   K+ + A+Q         
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMG--MDTHFVTGLDEHGQKVEQAAKQNGF------ 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL----HGHAYEANN 150
                T K T  F    T L         R T    +    ++ I+      G  Y+   
Sbjct: 66  TPQAWTDKMTPNFKNMWTALDIKYDDF-IRTTE--DRHKKAVKRILDIVNAKGDIYKGEY 122

Query: 151 EIIFDTS--------------SIPNYGS-FSRRKID----EQKMGTRVPEKYHKKNPADF 191
           E  +  S                P+ G   +  K +    +         K+  ++P DF
Sbjct: 123 EGKYCVSCETFFPENQLNGSNKCPDCGKDLTVLKEESYFFKMSKYADALLKHIDEHP-DF 181

Query: 192 ILWKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHY 226
           IL          +            + +  G P      HI            ++     
Sbjct: 182 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAGFEN 241

Query: 227 LGKVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGR 276
               FD        +H  G D+I  H         C       K  +  + +G+   EG 
Sbjct: 242 DENKFDKFWNNSRVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGE 297

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-------- 327
           KMSKS GN +   + +       + +     R  +L   ++    D++ + +        
Sbjct: 298 KMSKSRGNVVNPYDEI-------KKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDL 350

Query: 328 -TEAEILLSK--------WPQTSTSKGIIDP--AVLSALYND-----------LNTVSAI 365
             +   LL++        +  T  S    +P    + +++ND                A+
Sbjct: 351 ANDLGNLLNRTLGMYKKYFNGTIVSSSTAEPIDDEIKSMFNDVVKDVEKYMYLFEFSRAL 410

Query: 366 QALHKLARESTKNHD 380
           + + K      K  D
Sbjct: 411 ETIWKFISRLNKYID 425


>gi|295105908|emb|CBL03451.1| Isoleucyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
          Length = 945

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 252 SCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           S  A  +    ++ +H GF ++ EG+KMSKS GN +   +++           A V+RL 
Sbjct: 583 SMGAYGVPPYKSV-MHCGFTMDAEGKKMSKSAGNGVDPADVMAKSG-------ADVLRLW 634

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y + ++   + L        +   T
Sbjct: 635 VASVDYSQDVNIGDEILERTSEAYRRIRNT 664


>gi|294155468|ref|YP_003559852.1| isoleucine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291600367|gb|ADE19863.1| isoleucine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 888

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 45/112 (40%), Gaps = 7/112 (6%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           + +D++  G+D       + I  S           +  H   L+ +G KMSKS GN I+ 
Sbjct: 539 QPYDVYLEGIDQYRGWFNSSIINSVAYSGKSPYKTLISHGFVLDGKGEKMSKSKGNIISP 598

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++++          A ++RL    + Y   ++ +   L +   +  K   T
Sbjct: 599 LDVVKKNG-------ADILRLWAANSEYSNDVNISESILDQNGEIYRKIRNT 643


>gi|255025946|ref|ZP_05297932.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|254827094|ref|ZP_05231781.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258599477|gb|EEW12802.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|83771678|dbj|BAE61808.1| unnamed protein product [Aspergillus oryzae]
          Length = 988

 Score = 44.8 bits (105), Expect = 0.029,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 46/155 (29%), Gaps = 22/155 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +     D      E A  E    P       I
Sbjct: 99  HMGHLRVYTISDVLARFYRMRGHE--VLHPMGW-DAFGLPAENAAIERGIDPAEWTKDNI 155

Query: 100 TSKNTQQ------FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI- 152
                Q       F  D   LA  AP        H  ++  +   +   G AY+A   + 
Sbjct: 156 ARMKEQLRSISTSFDWDRE-LATCAPEFY----EHTQRIFLM---LYKKGLAYQAEALVN 207

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                        +  ++D      R   K  K N
Sbjct: 208 YDPVDKT----VLANEQVDANGFSWRSGAKVEKLN 238


>gi|312864725|ref|ZP_07724956.1| valine--tRNA ligase [Streptococcus downei F0415]
 gi|311099852|gb|EFQ58065.1| valine--tRNA ligase [Streptococcus downei F0415]
          Length = 883

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    S     Y   
Sbjct: 424 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           ++++        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DVID-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|299134230|ref|ZP_07027423.1| isoleucyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298590977|gb|EFI51179.1| isoleucyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 991

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 19/161 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  GRKMSKS GN     +++       +   A ++RL +
Sbjct: 636 SCGTRGRAPYDIVLTHGFTLDEHGRKMSKSLGNTTAPQDVI-------KQSGADILRLWV 688

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---YNDLNTVSA---- 364
             + Y + +    + L        K   T             A     +D+         
Sbjct: 689 AQSDYSDDLRIGPEILKGTIETYRKLRNTIRWMLGSLAHFHDADRIKADDM--PELERLM 746

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  +  + R++    D   +  A +H +  E+   + +
Sbjct: 747 LHRLSEIDAVVRQAYSEFDYKTVIAALSHFMNTELSAFYFD 787


>gi|270290996|ref|ZP_06197219.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280392|gb|EFA26227.1| valyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 887

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 60/156 (38%), Gaps = 17/156 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    Y      +   G D+IF      I QS          ++ +H    + 
Sbjct: 469 GWPDENAADFKRYFPTSTLV--TGYDIIFFWVARMIFQSLKFTGKRPFKDVLLHGLIRDE 526

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   ++++        + A  +R  +    T   + + F+  ++  A 
Sbjct: 527 QGRKMSKSLGNGIDPMDVID-------KYGADALRWFLSNGSTA-GQDLRFSYTKMDAAW 578

Query: 332 ILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS 363
             ++K    S     +   +D   L AL   LN   
Sbjct: 579 NFINKIWNASRYVIMNLDQVDKPQLPALNE-LNLAD 613


>gi|260912720|ref|ZP_05919206.1| leucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260633098|gb|EEX51263.1| leucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 860

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 43/141 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +          + ++  ++P  LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRLWNLVFEYNKNPAETAVEPTALSANQKSLRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKN 378
             NT  AI A+ +L  + TK 
Sbjct: 721 TFNT--AIAAIMELMNKLTKA 739


>gi|116250771|ref|YP_766609.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255419|emb|CAK06495.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 514

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE--PIDFT 323
           + +G++ ++GRK+ KS GN I    +++T            +R  +L  H R     DF+
Sbjct: 288 LVHGYVTVDGRKIGKSAGNGIDPERIIQTYG------TPDALRYYLLR-HIRSGDDGDFS 340

Query: 324 VQRLTEA 330
            +RL  A
Sbjct: 341 AERLEAA 347


>gi|15900189|ref|NP_344793.1| leucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657179|ref|ZP_01407956.1| hypothetical protein SpneT_02001607 [Streptococcus pneumoniae
           TIGR4]
 gi|32171579|sp|Q97SS0|SYL_STRPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14971724|gb|AAK74433.1| leucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|332164770|ref|NP_001193724.1| isoleucyl-tRNA synthetase, mitochondrial [Bos taurus]
          Length = 1012

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A        + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 639 SVAARNKSPFKTVVVHGFTLGEKGEKMSKSLGNIIDPDVVINGGQDHSKEPPYGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +  +   L  A   +SK   T
Sbjct: 699 WVAESNVFTEVTISPSLLNAARDDISKLRNT 729


>gi|296479298|gb|DAA21413.1| isoleucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 919

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A        + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 546 SVAARNKSPFKTVVVHGFTLGEKGEKMSKSLGNIIDPDVVINGGQDHSKEPPYGADVLRW 605

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +  +   L  A   +SK   T
Sbjct: 606 WVAESNVFTEVTISPSLLNAARDDISKLRNT 636


>gi|269926124|ref|YP_003322747.1| leucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
 gi|269789784|gb|ACZ41925.1| leucyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
          Length = 816

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 15/124 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG + I  HH      +     +      E    + +H G +   G KMSKS G
Sbjct: 537 PVDSYMGGKEHIVLHHLYSRFVTKVLYDLGYLEFDEPFTRLRLH-GIITHLGAKMSKSRG 595

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E +E        + A  +R   + M  Y +  +F+V  +      L++      
Sbjct: 596 NVVNPDEYIE-------KYGADALRTYLLFMGPYEDDNEFSVHGVQGVSRFLNRLYSLVD 648

Query: 343 SKGI 346
           S+  
Sbjct: 649 SRHD 652


>gi|256371339|ref|YP_003109163.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
 gi|256007923|gb|ACU53490.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
          Length = 503

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 71/361 (19%), Positives = 111/361 (30%), Gaps = 102/361 (28%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A  +I+ D + R  R    E     VR +T  D+  ++ A+          
Sbjct: 13  VNGDPHLGTAYAVILADAIARWHRLIGDE-----VRFVTGTDEHGLKIAQSAEAH---GV 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +        + QF +    L         R T   H   +   ++ I   G  Y    E 
Sbjct: 65  SPQAWVDVTSAQFRRAWDALEVSYDD-FIRTTEPRHHRSVQRFLERIHDRGDIYLGTYEG 123

Query: 153 IFDTSSIPNY-------GSFS---------RRKIDEQKMGTRVPEK---YHKKNPADFIL 193
           ++       Y       G             R+ +     +R  ++   +++++P    +
Sbjct: 124 LYCVRCEAYYQPGELEPGELCPVHHVACERMREENYFFALSRYQDRLLEHYERHPE--AI 181

Query: 194 WKRSTPMEP--------------GWESPWGRGRPGW---HI------------------E 218
           W  S   E                    WG   P W   H+                  E
Sbjct: 182 WPESRRNEVLRFIEGGLTDISITRTSIDWGVRVP-WDSRHVFYVWYDALVNYLTAIGYAE 240

Query: 219 CSA-------MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
            SA        + H LGK  DI      L F  H       C A  I+  A + I  G+L
Sbjct: 241 DSAEVAAWWPAAHHLLGK--DI------LRF--HAVWWPAMCLAAGIDPPAQL-IVTGWL 289

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-----PIDFTVQR 326
             EG KMSKS  N I             R+  A  +R  ++    R        D +++ 
Sbjct: 290 LNEGEKMSKSLANQI-------DPLGVQRALSADALRHYLV----RSSAIGPDWDVSLEA 338

Query: 327 L 327
           L
Sbjct: 339 L 339


>gi|225867757|ref|YP_002743705.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|259511552|sp|C0MET9|SYL_STRS7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225701033|emb|CAW97815.1| leucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  A   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGARKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K       G +D A           +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKEIVAENSGALDKAYHETVKAVTEQIEGM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              L   +      L +     HL + +
Sbjct: 718 EDKLYVAYAKGFVQL-LAPFAPHLGEEL 744


>gi|73662315|ref|YP_301096.1| leucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123761539|sp|Q49YI8|SYL_STAS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|72494830|dbj|BAE18151.1| leucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 804

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 65/172 (37%), Gaps = 22/172 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLFDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVINPDDIVKSHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRIWRLLI 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFNASAHIL 392
           T  G I   V++      N   A+ ++ H+  ++ T++++ L    A + ++
Sbjct: 636 TEDGSISNKVVN------NHSKALDKSYHQTVKKVTEDYNSLNFNTAISQLM 681


>gi|289621798|emb|CBI51709.1| unnamed protein product [Sordaria macrospora]
          Length = 1007

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 44/160 (27%), Gaps = 18/160 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + H+G+ R   + DV+ R       +  +       D      E A  E      
Sbjct: 98  PYPSGYLHLGHLRVYTIADVIARFQTLQGHKVLLPMGW---DAFGLPAENAAIER----- 149

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEA 148
               +  T  N  +  +    +          AT   P      Q I       G AY+A
Sbjct: 150 GINPATWTKANIAKMKEQLDVMNGSWDWDCELAT-CDPDFYKHTQKIFLALHEKGLAYQA 208

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
             E+              +  ++D      R   K  K+ 
Sbjct: 209 EAEVNYDPVDKT----VLANEQVDANGRSWRSGAKVEKRK 244


>gi|297205794|ref|ZP_06923189.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297148920|gb|EFH29218.1| valine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 883

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ P D   W++   +   W S   W     GW  E +A    Y      +   G D+I
Sbjct: 432 GEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFKRYFPTNALV--TGYDII 489

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS    + +   ++ +H    + +GRKMSKS GN I   ++++        
Sbjct: 490 FFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMDVID-------K 542

Query: 302 WPAPVIRLAMLMT 314
           + A  +R  +L  
Sbjct: 543 YGADALRWFLLNG 555


>gi|253575687|ref|ZP_04853023.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251845025|gb|EES73037.1| valyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 891

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 45/190 (23%), Positives = 72/190 (37%), Gaps = 26/190 (13%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+I+      I  S          ++ IH    + 
Sbjct: 475 GWPDEDSADLKRYFPTS--VLSTGYDIIYFWVARMIFTSLEFTGQVPFKDVLIHGLVRDS 532

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEA 330
           EGRKMSKS GN +   E++E        + A  +R  ML T    P   + F  +R+ +A
Sbjct: 533 EGRKMSKSLGNGVDPIEVIE-------KYGADAMRY-MLSTS-NTPGQDLRFRWERVEQA 583

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--------LHKLARESTKNHDLL 382
               +K    S    +    V    Y D++    +          +++ A+E T+  D  
Sbjct: 584 RNFANKIWNASRFALMNLEGVK---YEDIDISGELSTADRWILHRMNETAKEITRLIDAY 640

Query: 383 PIFNASAHIL 392
             F  +  +L
Sbjct: 641 E-FGETGRLL 649


>gi|222112431|ref|YP_002554695.1| leucyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|254782496|sp|B9MH67|SYL_DIAST RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221731875|gb|ACM34695.1| leucyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 910

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y C    Y     H+G+ R   + D+L R LR       +          
Sbjct: 26  VTEDQAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGHNVLMPMGW------ 79

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D     A  E+ ++      +  T  N     K    +  LA           P      
Sbjct: 80  DAFGLPA--ENAALKNGVPPAQWTYDNIAYMKKQMQAMG-LAIDWSREVATCDPDYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLDKGIAYRKTQVVNWD 159


>gi|188996192|ref|YP_001930443.1| leucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931259|gb|ACD65889.1| leucyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 607

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 42/149 (28%), Gaps = 18/149 (12%)

Query: 9   NTLERKITE---FQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           N+  ++  E   F+  +    + YV    P      H+G+ R   + D++ R   Y    
Sbjct: 10  NSFLKEWEENKIFKTKEEEGNKYYVLEMFPYPSGKIHMGHVRNYAIGDIVNRY--YRMAG 67

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
           K   +              A +           +  T +N     +   RL         
Sbjct: 68  KNTLHPMGWDAFGMPAENAAIKHGVH------PAKWTYENIDYMRQQLKRLGFSY-DWDR 120

Query: 124 RATNHIPQMIYLIQ----NIILHGHAYEA 148
             T   P+     Q     +   G AY  
Sbjct: 121 EVTTCNPEYYKWNQWIFLKMFEKGIAYRK 149


>gi|169834477|ref|YP_001693783.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|238688307|sp|B1I8Y2|SYL_STRPI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168996979|gb|ACA37591.1| leucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|222478457|ref|YP_002564694.1| valyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222451359|gb|ACM55624.1| valyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 892

 Score = 44.8 bits (105), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 12/118 (10%)

Query: 20  AIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            +DP+ +  +    PTV    H+G+     + D + R  R   GE    +  +   I  +
Sbjct: 32  PVDPNTVFSIDTPPPTVSGSLHMGHLYGFTLQDFVARFERMNGGETFFPFGYDDNGIASE 91

Query: 79  IIERARQEHPSIPIND-----AISIITSKNTQQFVKDTTRLACLAP------THQPRA 125
            +     +                 + ++   QF ++   L           T +PR 
Sbjct: 92  RLTEDELDIRHQDFERREFQAKCREVCAEYEAQFTENVQSLGVSVDWDHTYQTIEPRV 149


>gi|307243786|ref|ZP_07525918.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492840|gb|EFM64861.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 646

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 42/141 (29%), Gaps = 15/141 (10%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIG+A   I  D + R  R+   +  V ++    +  +KI ++
Sbjct: 4   KPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYD--VRFLTGTDEHGEKIQKK 61

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
           A           +      +   +  K   +L         R T   H   +  +   + 
Sbjct: 62  A------HEAGKSEIEFLDEQIAEIKKLWEKLEISNDDF-IRTTEERHEKAIQKIFTKLY 114

Query: 141 LHGHAYEA--NNEIIFDTSSI 159
             G  Y+            S 
Sbjct: 115 EKGEIYKGSYEGHYCVPCESF 135


>gi|256850916|ref|ZP_05556305.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661130|ref|ZP_05862044.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282934172|ref|ZP_06339450.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256615978|gb|EEU21166.1| valyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548067|gb|EEX24043.1| valyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281301786|gb|EFA94052.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 11/133 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ P D   W++   +   W S   W     GW  E +A    Y      +   G D+I
Sbjct: 428 GEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAADFKRYFPTNALV--TGYDII 485

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS    + +   ++ +H    + +GRKMSKS GN I   ++++        
Sbjct: 486 FFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMDVID-------K 538

Query: 302 WPAPVIRLAMLMT 314
           + A  +R  +L  
Sbjct: 539 YGADALRWFLLNG 551


>gi|237734465|ref|ZP_04564946.1| leucyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382285|gb|EEO32376.1| leucyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 798

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 27/179 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H             +      E    ++ H G  L     KMSKS 
Sbjct: 522 PVDLYVGGAEHAVLHLLYSRFWHKVLYDAGVVKCKEPWQRLF-HQGMILGDNNEKMSKSR 580

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN +  ++++ +         A  +RL  M M      + ++   L  +   L +  +  
Sbjct: 581 GNVVNPDDIVASHG-------ADSLRLYEMFMGPLEAALPWSTNGLDGSRKWLDRVYRLF 633

Query: 342 TSKGIIDPAVLSALY-----------NDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
             +  +      +L            +D  T+    A+ ++     + +    ++   A
Sbjct: 634 IEQDKLSDENDHSLDRVYHQTVKKVTDDFETLGFNTAISQMMIFINECYKAETVYKEYA 692


>gi|121703584|ref|XP_001270056.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119398200|gb|EAW08630.1| leucyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 994

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 18/151 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +              A      I      +  
Sbjct: 96  HMGHLRVYTISDVLARFYRMKGHE--VLHPMGWDAFGLPAENAA------IERGIDPAEW 147

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI-IF 154
           T +N  +  +    ++      +  AT   P+     Q I       G AY+A   +   
Sbjct: 148 TKQNIAKMKEQLRSISTSFDWDRELATCS-PEFYEHTQRIFLMLHKKGLAYQAEAVVNYD 206

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
                      +  ++D      R   K  K
Sbjct: 207 PVDKT----VLANEQVDANGFSWRSGAKVEK 233


>gi|114704621|ref|ZP_01437529.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114539406|gb|EAU42526.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 518

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D L R  R    +  V ++    +   K+++ AR +            
Sbjct: 18  PHIGHAYELIATDALARFKRLDGYD--VFFLTGTDEHGIKMLQNARAQGL------TPRE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEIIFDT 156
           +   N+ +F + +  L         R +    ++      + +   G  Y+      +  
Sbjct: 70  LADANSAEFQRMSAALGGSNDDF-IRTSEARHKIACQAIWKRMEEAGDIYKDAYSGWYSV 128

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 129 RDEAYYGE 136


>gi|322517529|ref|ZP_08070398.1| leucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322123789|gb|EFX95363.1| leucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 72/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIELMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                    K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEEIWQTVAETGESISYVAWPTWDEGKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|295696445|ref|YP_003589683.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295412047|gb|ADG06539.1| isoleucyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 928

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   E+++          A ++RL +
Sbjct: 573 AVAVKGQAPYRAVLTHGFLLDGEGRKMSKSLGNVVDPLEVMDRLG-------ADILRLWV 625

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR     +   L +   +  K   T
Sbjct: 626 ASVDYRSDARVSDAILKQVAEVYRKIRNT 654


>gi|221106692|ref|XP_002168563.1| PREDICTED: similar to leucyl-tRNA synthetase, partial [Hydra
           magnipapillata]
          Length = 142

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 49/127 (38%), Gaps = 32/127 (25%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N +A    AD+ EK       NG L L   KMSKS GNF
Sbjct: 11  PLDLRVSGKDLIPNHLTYFLYNHVAVW--ADQQEKWPKSVRANGHLLLNSEKMSKSTGNF 68

Query: 286 ITIN-------------------ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +T+                    + +E   F  ++  A ++RL          +++T + 
Sbjct: 69  LTLEHAIKKFSADGMRLALADAGDSIEDANFVEKTADAAILRLFTF-------VEWTKEM 121

Query: 327 LTEAEIL 333
           +   E L
Sbjct: 122 IENQENL 128


>gi|168492209|ref|ZP_02716352.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183573589|gb|EDT94117.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 42/211 (19%), Positives = 69/211 (32%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDTSIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNAANKEE 719

Query: 380 ----DLLPIFNASAHILGIEVCKEHLN--------------------KNISIAIEKLVQE 415
               D    F          + +E                       K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQMIAPFAPHLAEELWQTVAATGDSISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|116873455|ref|YP_850236.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123466497|sp|A0AKC5|SYI_LISW6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116742333|emb|CAK21457.1| isoleucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|323704166|ref|ZP_08115745.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323536232|gb|EGB26004.1| isoleucyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 927

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 38/91 (41%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     I    N+  H   ++ EGRKMSKS GN I   +++       + + A ++RL  
Sbjct: 575 SVATKGIAPYKNVLTHGFVVDGEGRKMSKSLGNGIDPADVV-------KEYGADILRLWA 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +   +  + + L +      K   T+ 
Sbjct: 628 VSADFTSDMRISKEILKQMTESYRKIRNTAK 658


>gi|296193119|ref|XP_002744370.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 3
           [Callithrix jacchus]
          Length = 1130

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 20/196 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     ++ +K       NG L L   KMSKS 
Sbjct: 618 FWYPVDLRVSGKDLVPNHLTYYLYNHVAMW--PEQSDKWPRAVRANGHLLLNSEKMSKST 675

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ 339
           GNF+T+ + ++        + A  +RLA+      + +   +F         + L  W +
Sbjct: 676 GNFLTLTQAID-------KFSADGMRLALADAG--DTVEDANFVETMADAGILRLYTWVE 726

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                     ++ S   +  N       L+    ++ +N++ + +F  +    G    + 
Sbjct: 727 WVKEMVANWDSLRSGPADTFNDRVFASELNAGIIKTDQNYEKM-MFKEALKT-GFFEFQA 784

Query: 400 HLNKNISIAIEKLVQE 415
             +K   +A+E + +E
Sbjct: 785 AKDKYRELAVEGMHRE 800


>gi|293571995|ref|ZP_06683008.1| leucyl-tRNA synthetase [Enterococcus faecium E980]
 gi|291607919|gb|EFF37228.1| leucyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 804

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 636 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 690

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 691 DALPYEYIEGFVQ 703


>gi|261840097|gb|ACX99862.1| isoleucyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 920

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 19/183 (10%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYQGEKGQSPSDVILEGSDQHRGWFQSSLLIGCILNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN ++++ LL+T         + V+RL +    Y+  +  +    T+ E    K
Sbjct: 610 KMSKSKGNVVSLDNLLKTHG-------SDVVRLWVAFNDYQNDLRVSQTFFTQTEQHYKK 662

Query: 337 WPQT----STSKGIIDPAVLSALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           +  T      +   +D   L   +N    D   + A++ +      + + HD +   N  
Sbjct: 663 FRNTLKFLLANFSDMDLKNLERSHNFSPLDHFILEALETISAGVNSAFEEHDFVKGLNIL 722

Query: 389 AHI 391
              
Sbjct: 723 MAF 725


>gi|225630101|ref|YP_002726892.1| valyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|225592082|gb|ACN95101.1| valyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 823

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 16/135 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PT+    HIG+       D + R  R     K V Y     D       + ++  +   +
Sbjct: 42  PTISGKLHIGHIFSYCHTDFIARFQRMLG--KDVFYPIGFDDNGLPTERLVEQTYKTRAK 99

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC-----LAPTHQPRATNHIPQMIYLIQNII 140
           E       +    +  K+ Q+F +    +       L      + T  + QM   I  + 
Sbjct: 100 EVGREKFIEMCHEVIEKSKQEFKELFKSVGISYDWDLEYHTISKETVTLSQM-SFID-LY 157

Query: 141 LHGHAYEANNEIIFD 155
             G+AY     I++D
Sbjct: 158 NKGYAYRKMQPILWD 172


>gi|219851348|ref|YP_002465780.1| leucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
 gi|219545607|gb|ACL16057.1| leucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
          Length = 926

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 53/160 (33%), Gaps = 19/160 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            +D      DLI  H   ++         +      +  G   L G KMS S GN   + 
Sbjct: 559 PYDFRFSAKDLISNHLTFQVFHHVAIFPEQYQPKGIVVFGMGLLNGAKMSSSKGNVFLLE 618

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +       + + A  +R+ ++ +   + +  D+  + +      + ++  T T    +
Sbjct: 619 DAV-------QEFGADTVRMFLMGSAEPW-QDFDWRNELVASTRKQIERFYATVTEGMTV 670

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                        T      + +L R   K  D L +F  
Sbjct: 671 TGDQ---------TPIDAWLISRLQRHIQKTTDALELFQT 701



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 30/81 (37%), Gaps = 6/81 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG---EKCVTYVRNITDIDDKIIER-ARQEHP 88
           P      H+G+ R  +V DV+ R  R            +V     I   I +R AR +  
Sbjct: 38  PYPSGAMHVGHGRTYMVPDVIARFWRMRGKQVLYPMAFHVTGAPVIG--ISKRIARGDEA 95

Query: 89  SIPINDAISIITSKNTQQFVK 109
           +I +   +  +  +   QF  
Sbjct: 96  AIHLYRDLYRVPQQVLDQFTD 116


>gi|39949929|ref|XP_363239.1| hypothetical protein MGG_01165 [Magnaporthe oryzae 70-15]
 gi|145021046|gb|EDK05175.1| hypothetical protein MGG_01165 [Magnaporthe oryzae 70-15]
          Length = 974

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 38/105 (36%), Gaps = 24/105 (22%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW----------------- 302
              N+  H   L+  G+KMSKS GN I+  +++E K    R                   
Sbjct: 590 PFKNLITHGFTLDAHGKKMSKSLGNVISPMDVIEGKLLAPRKPGRNKQRKKTQEKNQSDP 649

Query: 303 -------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                      +RL +  + Y + I  + + L+     L K+  T
Sbjct: 650 AATHEVLGPDALRLLVASSDYTKDIVISERALSSIHTSLRKFRST 694


>gi|291519091|emb|CBK74312.1| arginyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 586

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 31/201 (15%), Positives = 62/201 (30%), Gaps = 24/201 (11%)

Query: 10  TLERKITEF---QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           T+      F   +   P  + +   GP V    H+G+ R  I+ + + R  R+   E   
Sbjct: 98  TMADDKERFGVDKVSSPKKVMIDYGGPNVAKPLHVGHLRSAIIGESIKRTARFMGDEV-- 155

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
                   I D  +         + +      +   +   F +         PT  P   
Sbjct: 156 --------IGDVHLG---DWGLQMGLIITELKLRQPDLVYFDESYDG---EYPTEPPFTI 201

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--KYH 184
             + ++            AY+   E     +    +G    + +    +   V +  + +
Sbjct: 202 TELEEIYPCASGKSKEDAAYK---EAAMTATYELQHGRKGYQALLSHILNVSVNDLKRNY 258

Query: 185 KKNPADFILWKRSTPMEPGWE 205
           +K   DF LWK  +  +P   
Sbjct: 259 EKLDVDFDLWKGESDAQPYIP 279


>gi|284802465|ref|YP_003414330.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995607|ref|YP_003417375.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284058027|gb|ADB68968.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061074|gb|ADB72013.1| isoleucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 921

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 568 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDEILKQVSEVYRKIRNT 649


>gi|229152660|ref|ZP_04280848.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228630806|gb|EEK87447.1| Valyl-tRNA synthetase [Bacillus cereus m1550]
          Length = 867

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 71/196 (36%), Gaps = 27/196 (13%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  ++  E  +GT  P      N  + +L  W  S        + W     GW  E SA 
Sbjct: 408 WYHKETGEVYVGTEAPVDIENWNQDNDVLDTWFSS--------ALWPFSTLGWPNEDSAD 459

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y     D    G D+IF      I Q           ++ IH    + +GRKMSKS 
Sbjct: 460 FKRY--YSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSL 517

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I   +++E        + A  +R  +       + + F+++++      ++K    S
Sbjct: 518 GNGIDPMDVIE-------KYGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNAS 570

Query: 342 TSKGIIDPAVLSALYN 357
                    VL  + +
Sbjct: 571 R-------FVLMNMDD 579


>gi|189083237|sp|A5W9H9|SYL_PSEP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 868

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++E       ++ A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQSMIE-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +  Q   S+G+     ++AL +    +   +A+H   ++++ +      FN A
Sbjct: 676 RFLRRVWRLAQAHVSQGLPGKLDVAALDDAQKVIR--RAIHAAIKQASTDVGQFHKFNTA 733

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            A ++ +    E   +        L+QE L  
Sbjct: 734 IAQVMTVMNVLEKAPQATEQD-RALLQEGLEA 764



 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 37/143 (25%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
               P     Y      Y     H+G+ R   + DV+ R  R     K V          
Sbjct: 26  VTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N A +  T +N          L  LA       T   P      
Sbjct: 84  MPAENAA------MKNNVAPAKWTYENIDYMKTQLKSLG-LAIDWAREVTTCKPDYYRWE 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     +   G  Y  N  + +D
Sbjct: 137 QWLFTRLFEKGIIYRKNGTVNWD 159


>gi|158521204|ref|YP_001529074.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158510030|gb|ABW66997.1| isoleucyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 929

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  G+KMSKS GN I  + ++       + + A ++RL +  + YRE I  +   
Sbjct: 593 HGFVVDGNGKKMSKSMGNVIAPDAII-------KKYGAEILRLWVAASDYREDIRISDPI 645

Query: 327 LTEAEILLSKWPQTST 342
           + +      K   TS 
Sbjct: 646 VNQLSDAYKKVRNTSR 661


>gi|78184679|ref|YP_377114.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|123729939|sp|Q3AXV7|SYL_SYNS9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78168973|gb|ABB26070.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 884

 Score = 44.8 bits (105), Expect = 0.031,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 8/96 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R       V +              A      I  
Sbjct: 69  PYPSGSLHMGHVRNYVITDVIARVQRMRG--DSVLHPMGWDAFGLPAENAA------IER 120

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           N      T +N  Q      RL       + +AT H
Sbjct: 121 NIDPGEWTDRNIDQMRNQLDRLGLSIDWDREQATCH 156


>gi|317014793|gb|ADU82229.1| isoleucyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 920

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYHGEKGQSPSDVVLEGSDQHRGWFQSSLLIGCVLNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN ++++ LL+          + V+RL +    Y+  +  +     + E    K
Sbjct: 610 KMSKSKGNVVSLDNLLKKHG-------SDVVRLWVAFNDYQNDLRVSQTFFIQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|296193121|ref|XP_002744371.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 4
           [Callithrix jacchus]
          Length = 1122

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 20/196 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     ++ +K       NG L L   KMSKS 
Sbjct: 610 FWYPVDLRVSGKDLVPNHLTYYLYNHVAMW--PEQSDKWPRAVRANGHLLLNSEKMSKST 667

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ 339
           GNF+T+ + ++        + A  +RLA+      + +   +F         + L  W +
Sbjct: 668 GNFLTLTQAID-------KFSADGMRLALADAG--DTVEDANFVETMADAGILRLYTWVE 718

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                     ++ S   +  N       L+    ++ +N++ + +F  +    G    + 
Sbjct: 719 WVKEMVANWDSLRSGPADTFNDRVFASELNAGIIKTDQNYEKM-MFKEALKT-GFFEFQA 776

Query: 400 HLNKNISIAIEKLVQE 415
             +K   +A+E + +E
Sbjct: 777 AKDKYRELAVEGMHRE 792


>gi|257888996|ref|ZP_05668649.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257897590|ref|ZP_05677243.1| leucyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|257825059|gb|EEV51982.1| leucyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|257834155|gb|EEV60576.1| leucyl-tRNA synthetase [Enterococcus faecium Com12]
          Length = 804

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 636 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 690

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 691 DALPYEYIEGFVQ 703


>gi|254508960|ref|ZP_05121067.1| tRNA synthetases class I (I, L, M and V) family [Vibrio
           parahaemolyticus 16]
 gi|219548135|gb|EED25153.1| tRNA synthetases class I (I, L, M and V) family [Vibrio
           parahaemolyticus 16]
          Length = 655

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 267 EEYNGASADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGQGRKMSKSIG 326

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 327 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 378


>gi|119872529|ref|YP_930536.1| valyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|119673937|gb|ABL88193.1| valyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 799

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 14/130 (10%)

Query: 33  PTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV--RNITDIDDKIIER---AR 84
           P  Y   +  HIG       FD++ R LR    +    +   RN   I+ ++ ++     
Sbjct: 43  PPPYLSSNRPHIGQTASYAHFDMIARFLRMRGFDVVFPFYLDRNGLPIEVQVEKKYNIVA 102

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII---- 140
            E P             +  ++FV    R   L+  + P+ T+  P+   + Q       
Sbjct: 103 HEIPREKFLQLCKEELDRYEKEFVTALRRWG-LSFDYWPQGTDS-PEYRRMTQKTFIELW 160

Query: 141 LHGHAYEANN 150
             G  YEA  
Sbjct: 161 HRGLIYEAER 170


>gi|299535884|ref|ZP_07049204.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
 gi|298728636|gb|EFI69191.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus fusiformis ZC1]
          Length = 922

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   L+ EGRKMSKS GN I   ++++        + A ++RL +
Sbjct: 568 SVAINGYAPYKGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMD-------QYGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   +  ++  L +   +  K   T
Sbjct: 621 ASVDYTADVRISMDMLKQVSEVYRKIRNT 649


>gi|260775152|ref|ZP_05884050.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260608853|gb|EEX35015.1| isoleucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 942

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 554 EEYNGASADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGQGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|238494030|ref|XP_002378251.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
 gi|220694901|gb|EED51244.1| leucyl-tRNA synthetase [Aspergillus flavus NRRL3357]
          Length = 960

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 46/155 (29%), Gaps = 22/155 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +     D      E A  E    P       I
Sbjct: 99  HMGHLRVYTISDVLARFYRMRGHE--VLHPMGW-DAFGLPAENAAIERGIDPAEWTKDNI 155

Query: 100 TSKNTQQ------FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI- 152
                Q       F  D   LA  AP        H  ++  +   +   G AY+A   + 
Sbjct: 156 ARMKEQLRSISTSFDWDRE-LATCAPEFY----EHTQRIFLM---LYKKGLAYQAEALVN 207

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                        +  ++D      R   K  K N
Sbjct: 208 YDPVDKT----VLANEQVDANGFSWRSGAKVEKLN 238


>gi|242808514|ref|XP_002485180.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
 gi|218715805|gb|EED15227.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
           10500]
          Length = 578

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 51/159 (32%), Gaps = 22/159 (13%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           Y+T       F          YV  P  Y     H+G+   M++ DV+ R      G K 
Sbjct: 43  YSTQANSQKPF----------YVTTPIFYVNAAPHVGHLYSMVLGDVIKRW-EQLKGNKD 91

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
             ++   TD     I++A QE                N + F             H  R 
Sbjct: 92  AIFLTG-TDEHGIKIQQAAQE-----AGMDTQAFCDMNCKTFKDLARAANISN-DHFIRT 144

Query: 126 TN--HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNY 162
           T+  H   + Y  + +   G+ Y   +E  +  S    Y
Sbjct: 145 TDEAHKDAVRYFWEMLQHRGYIYTKKHEGWYSVSDEAFY 183


>gi|195978584|ref|YP_002123828.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195975289|gb|ACG62815.1| valyl-tRNA synthetase ValS [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
          Length = 883

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           +  +G   PE            WK+   +   W S   W     GW    +     Y   
Sbjct: 424 DMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DVIE-------KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|171914551|ref|ZP_02930021.1| methionyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 527

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 15/110 (13%)

Query: 232 DIHGGGLDLIFPHHEN--EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           D H  G D++ P H     I         ++   + +H G+ N++G+KMSK+ GN +  N
Sbjct: 262 DAHVIGKDILVPAHAIYWPIMLHALGFPDDQMPKLIVH-GWWNIKGQKMSKTLGNVVDPN 320

Query: 290 ELLETKKFGGRSWPAPVIRLAM---LMTHYREPIDFTVQRLTEAEILLSK 336
           E+          +    +R  +   + T Y   +  + +R+  A   L+K
Sbjct: 321 EV-------SNVFTPEALRYYLMRDMSTGYDADL--SEERMQIAYNELAK 361


>gi|26991474|ref|NP_746899.1| leucyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|32130172|sp|Q88DN1|SYL_PSEPK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|24986552|gb|AAN70363.1|AE016678_4 leucyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|313500773|gb|ADR62139.1| LeuS [Pseudomonas putida BIRD-1]
          Length = 868

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++E       ++ A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQSMIE-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +  Q   S+G+     ++AL +    +   +A+H   ++++ +      FN A
Sbjct: 676 RFLRRVWRLAQAHVSQGLPGKLDVAALDDAQKVIR--RAIHAAIKQASTDVGQFHKFNTA 733

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            A ++ +    E   +        L+QE L  
Sbjct: 734 IAQVMTVMNVLEKAPQATEQD-RALLQEGLEA 764



 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 37/143 (25%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
               P     Y      Y     H+G+ R   + DV+ R  R     K V          
Sbjct: 26  VTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N A +  T +N          L  LA       T   P      
Sbjct: 84  MPAENAA------MKNNVAPAKWTYENIDYMKTQLKSLG-LAIDWAREVTTCKPDYYRWE 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     +   G  Y  N  + +D
Sbjct: 137 QWLFTRLFEKGIIYRKNGTVNWD 159


>gi|296193115|ref|XP_002744368.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 1
           [Callithrix jacchus]
          Length = 1176

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 20/196 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     ++ +K       NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLTYYLYNHVAMW--PEQSDKWPRAVRANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ 339
           GNF+T+ + ++        + A  +RLA+      + +   +F         + L  W +
Sbjct: 722 GNFLTLTQAID-------KFSADGMRLALADAG--DTVEDANFVETMADAGILRLYTWVE 772

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                     ++ S   +  N       L+    ++ +N++ + +F  +    G    + 
Sbjct: 773 WVKEMVANWDSLRSGPADTFNDRVFASELNAGIIKTDQNYEKM-MFKEALKT-GFFEFQA 830

Query: 400 HLNKNISIAIEKLVQE 415
             +K   +A+E + +E
Sbjct: 831 AKDKYRELAVEGMHRE 846


>gi|281208129|gb|EFA82307.1| isoleucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 993

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S CA  I    N+  H   L+ +G K SKS GN I  + +
Sbjct: 588 DIYLEGSDQHRGWFQSSLLTSICARGIAPYKNVVTHGFLLDEKGNKQSKSLGNTIAPSLI 647

Query: 292 LETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +          ++   ++R+ +  + Y + I      LT+    + K   T  
Sbjct: 648 IHGGNNKTENPAYGVDMLRMWIATSDYTKDISVGPTILTKVLDNVKKIRNTVR 700


>gi|167756746|ref|ZP_02428873.1| hypothetical protein CLORAM_02293 [Clostridium ramosum DSM 1402]
 gi|167702921|gb|EDS17500.1| hypothetical protein CLORAM_02293 [Clostridium ramosum DSM 1402]
          Length = 798

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 27/179 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H             +      E    ++ H G  L     KMSKS 
Sbjct: 522 PVDLYVGGAEHAVLHLLYSRFWHKVLYDAGVVKCKEPWQRLF-HQGMILGDNNEKMSKSR 580

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN +  ++++ +         A  +RL  M M      + ++   L  +   L +  +  
Sbjct: 581 GNVVNPDDIVASHG-------ADSLRLYEMFMGPLEAALPWSTNGLDGSRKWLDRVYRLF 633

Query: 342 TSKGIIDPAVLSALY-----------NDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
             +  +      +L            +D  T+    A+ ++     + +    ++   A
Sbjct: 634 IEQDKLSDENDHSLDRVYHQTVKKVTDDFETLGFNTAISQMMIFINECYKAETVYKEYA 692


>gi|153834658|ref|ZP_01987325.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868910|gb|EDL67968.1| isoleucyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 942

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|148983657|ref|ZP_01816976.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923804|gb|EDK74916.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799401|emb|CBW31937.1| leucyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDISREELQE--IALADEK 807


>gi|149011480|ref|ZP_01832727.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147764470|gb|EDK71401.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 930

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--- 367
                   +  ++  L++      K   T           L A  +D N T  A+     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFNPTQDAVAYDEL 674

Query: 368 -------------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                        L K  R++  N + L I+ A  + + +++   +L+
Sbjct: 675 RSVDKYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|116515034|ref|YP_802663.1| hypothetical protein BCc_093 [Buchnera aphidicola str. Cc (Cinara
           cedri)]
 gi|122285570|sp|Q057X9|SYI_BUCCC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116256888|gb|ABJ90570.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
           cedri)]
          Length = 941

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   L+  G+KMSKS  N I+  ++++ K        A ++RL +  T+Y   I  + + 
Sbjct: 595 HGFVLDKNGQKMSKSLNNNISPKKIIQKKG-------ADILRLWVAYTNYTNDISISNEI 647

Query: 327 LTEAEILLSKWPQT 340
           L +      +   T
Sbjct: 648 LEQISDNYRRIRNT 661


>gi|56460236|ref|YP_155517.1| isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|81821756|sp|Q5QZS6|SYI_IDILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56179246|gb|AAV81968.1| Isoleucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 944

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     +  H   ++ +GRKMSKS GN +   +++             ++RL +  
Sbjct: 586 AMYDEAPYHQVLTHGFTVDAQGRKMSKSIGNVVAPQDVMNKLG-------GDILRLWVAS 638

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L  +     +   TS 
Sbjct: 639 ADYSGEMTVSDEILKRSADAYRRIRNTSR 667


>gi|22299873|ref|NP_683120.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|22296058|dbj|BAC09882.1| isoleucyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 981

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 33/148 (22%), Positives = 51/148 (34%), Gaps = 18/148 (12%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRLAM 311
                     +  H   L+ +GRKMSKS GN     E++E  K   +   + A V+RL +
Sbjct: 610 AVKGQAPYKAVLTHGFVLDEQGRKMSKSLGNVTDPREVIEGGKNQKQDPPYGADVLRLWV 669

Query: 312 LMTHYREPIDFTVQRLTE-----------AEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y   +      L +           A  LL         + +I  A L AL   + 
Sbjct: 670 SSVDYANDVPIGKNILRQLADVYRKIRNTARFLLGNLHDFEPEQDMIPYAQLPALDRYM- 728

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNAS 388
               +  LH++  E T   D    +   
Sbjct: 729 ----LHRLHEVFSEVTAAFDSFQFYRFF 752


>gi|330873573|gb|EGH07722.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum str.
           M302280PT]
          Length = 868

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGSVNWD 159


>gi|313607791|gb|EFR83990.1| isoleucyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 611

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 258 AVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVI-------KQLGADIVRLWV 310

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 311 ASVDYQADVRVSDEILKQVSEVYRKIRNT 339


>gi|312898161|ref|ZP_07757552.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
 gi|310620658|gb|EFQ04227.1| isoleucine--tRNA ligase [Megasphaera micronuciformis F0359]
          Length = 931

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A+ I     +  H   ++ EGRKMSKS GN +   E+++        + A V+RL +
Sbjct: 580 SVAANGIAPYKAVLTHGFTVDGEGRKMSKSVGNTVAPQEVID-------QYGADVMRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 633 SSADYQGDVRLSPKILKQLSDVYRKIRNT 661


>gi|307708096|ref|ZP_07644564.1| leucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307615881|gb|EFN95086.1| leucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 833

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 70/214 (32%), Gaps = 58/214 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGSLDKVYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKL 412
             D L +  A   I  I     HL + +                            IE +
Sbjct: 718 -EDKLYVDYAKGFIQLIAPFSPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIV 776

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           VQ +  +   K   + D  R++L+     L D K
Sbjct: 777 VQIKGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|227820993|ref|YP_002824963.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227339992|gb|ACP24210.1| isoleucyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 973

 Score = 44.8 bits (105), Expect = 0.032,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 30/186 (16%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +G KMSKS GN +T  E+
Sbjct: 602 DVYLEGSDQHRGWFHSSLLESCATRGRAPYDAVVTHGFTMDEKGEKMSKSKGNTVTPQEV 661

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLSKWPQTSTS 343
           ++          A ++RL ++ T Y     +  QRL         +A   L    +    
Sbjct: 662 MKDAG-------ADILRLWVMTTDY-----WEDQRLGKTIIQTNIDAYRKLRNTIRWMLG 709

Query: 344 KGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILGIEV 396
               D     AL +              +  L +L RE     D   I  A      +E+
Sbjct: 710 TLAHDKGETIALAD---MPELEQLMLHRLAELDRLVREGYDAFDFKRIARALIDFSNVEL 766

Query: 397 CKEHLN 402
              + +
Sbjct: 767 SAFYFD 772


>gi|323492574|ref|ZP_08097720.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323313176|gb|EGA66294.1| isoleucyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 942

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|156973299|ref|YP_001444206.1| isoleucyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|166229779|sp|A7MTD6|SYI_VIBHB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|156524893|gb|ABU69979.1| hypothetical protein VIBHAR_00980 [Vibrio harveyi ATCC BAA-1116]
          Length = 942

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|304320117|ref|YP_003853760.1| isoleucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
 gi|303299020|gb|ADM08619.1| isoleucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
          Length = 962

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 7/104 (6%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C          I  H   L+ +G KMSKS GN +   +++       + + A ++R+ 
Sbjct: 616 IGCGLRERAPFDGILTHGFVLDAKGYKMSKSLGNTVAPEDIV-------KKYGADILRIW 668

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
           +  + Y E +    + +  A     K   T            +A
Sbjct: 669 VASSDYSEDVRIGDEIIGSAVDAYRKLRNTLRYALAALKGFEAA 712


>gi|291542091|emb|CBL15201.1| valyl-tRNA synthetase [Ruminococcus bromii L2-63]
          Length = 897

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 16/163 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I  +C          +++H    +  G KMSKS GN I   E+++  
Sbjct: 508 TGYDIIFFWVARMIFSACENMGSAPFKTVFMHGIVRDENGIKMSKSLGNGIDPLEVID-- 565

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSK--GIIDPA 350
                 + A  +R  +   +   P   + ++ +R+       +K    S      I D  
Sbjct: 566 -----KYGADALRFFLATGN--TPGNDMRYSDKRVEACANFANKLWNASRYVHMNIDDHD 618

Query: 351 VLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHI 391
           V + L   L T     +  L+ +A+E  +N +   +  A   I
Sbjct: 619 VKNELPKTLTTEDKWIVSTLNTVAKEVNENLEKFELGIAVQKI 661


>gi|254820391|ref|ZP_05225392.1| methionyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
          Length = 514

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 42/124 (33%), Gaps = 14/124 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   +  D + R  R    +     VR +T  D+  ++       +     
Sbjct: 13  PNGDPHIGHAYEYVATDAIARFKRLDGFD-----VRFLTGTDEHGLK---MVETAAAEGI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
             + +  +N+  F +   RL   +     R T+  P      + I     A     +I  
Sbjct: 65  GTAELARRNSDVFQRLQERLNI-SFDRFIRTTD--PDHHEASKEIWRRMAA---AGDIYL 118

Query: 155 DTSS 158
           DT S
Sbjct: 119 DTYS 122



 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 41/104 (39%), Gaps = 14/104 (13%)

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G G P      S M   Y     D+H  G D+I  H     A    A  IE    ++ H 
Sbjct: 239 GVGYP---DTDSEMFRRYWPA--DLHMIGKDIIRFHTVYWPAFLMSA-GIELPRRVFAH- 291

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           GFL   G KMSKS GN +    L+E        +    +R  +L
Sbjct: 292 GFLLNRGEKMSKSVGNVVDPVALIE-------EFGVDQVRYFLL 328


>gi|163742256|ref|ZP_02149644.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
 gi|161384586|gb|EDQ08967.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
          Length = 982

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 636 QACGTKGRAPYRNVVTHGFTLDEKGNKMSKSLGNTIVPEKIV-------QQYGADILRLW 688

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 689 VAQTDYTADQRIGAEILKGVADGYRRLRNT 718


>gi|145250135|ref|XP_001396581.1| leucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134082094|emb|CAK42211.1| unnamed protein product [Aspergillus niger]
          Length = 989

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 47/153 (30%), Gaps = 22/153 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +     D      E A  E    P     S I
Sbjct: 101 HMGHLRVYTISDVLARFYRMRGHE--VLHPMGW-DAFGLPAENAAIERGIDPAEWTESNI 157

Query: 100 TSKNTQQ------FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI- 152
           T    Q       F  D   LA  AP        H  ++  +   +   G AY+A   + 
Sbjct: 158 TKMKEQLRSISTSFDWDRE-LATCAPEFY----EHTQRIFLM---LYEKGLAYQAEALVN 209

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
                        +  ++D      R   K  K
Sbjct: 210 YDPVDKT----VLANEQVDANGFSWRSGAKVEK 238


>gi|293553706|ref|ZP_06674329.1| leucyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|291602132|gb|EFF32361.1| leucyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 636 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 690

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 691 DALPYEYIEGFVQ 703


>gi|269962529|ref|ZP_06176877.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269832724|gb|EEZ86835.1| isoleucyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 942

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 554 EEYNGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGHGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|257886337|ref|ZP_05665990.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257822193|gb|EEV49323.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.033,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 636 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 690

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 691 DALPYEYIEGFVQ 703


>gi|304393180|ref|ZP_07375108.1| isoleucine--tRNA ligase [Ahrensia sp. R2A130]
 gi|303294187|gb|EFL88559.1| isoleucine--tRNA ligase [Ahrensia sp. R2A130]
          Length = 1002

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   +  +G KMSKS GN +T  +++       +   A ++RL +
Sbjct: 647 SCGTRGRAPYDAVLTHGFVMAEDGTKMSKSKGNTVTPQDVI-------KQSGADILRLWV 699

Query: 312 LMTHYREPIDFTVQRLT---EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA---- 364
               Y E +      L    +A   L    +        D     A  +           
Sbjct: 700 SSADYSEDLRLGKTILQTNIDAYRKLRNTLRWMLGTLAHDKGADVAHAD---MPELERLM 756

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L  + RE     D   IF A ++ + +E+   + +
Sbjct: 757 LHRLSELDVVVREGYDAFDFKRIFAALSNFMNLELSAFYFD 797


>gi|118602065|ref|YP_903280.1| leucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|166231641|sp|A1AV52|SYL_RUTMC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118567004|gb|ABL01809.1| leucyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 816

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 232 DIHGGGLDLIFPHHE-----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           D + GG++    H       N++ +     + ++     +  G +  +G KMSKS GN +
Sbjct: 524 DQYIGGIEHAILHLLYARFFNKLLRDEGFIKNDEPFKNLLTQGMVLKDGAKMSKSKGNTV 583

Query: 287 TINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
              +++E        + A  +RL +L      + ++++   L      ++K  + 
Sbjct: 584 DPAQMIE-------KYGADTVRLFILFAAPPTQNLEWSDSGLEGVHRFINKVYRL 631


>gi|118590687|ref|ZP_01548088.1| isoleucyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118436663|gb|EAV43303.1| isoleucyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 1000

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   +  +GRKMSKS GN +   +++       + + A ++RL +
Sbjct: 646 SCGTRGHAPYDAVLTHGFTMAEDGRKMSKSLGNQVFPQDVI-------KQYGADILRLWV 698

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLS--ALYNDLNTVSA---- 364
             T Y E      + +  +     K   T     G +  A     AL +           
Sbjct: 699 ASTDYWEDQRLGPEIIKTSVDSYRKLRNTLRWMLGSLAHATGEEVALAD---MPELERLM 755

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L K+ RE+    D   +F+     + +E+   + +
Sbjct: 756 LHRLSELDKMIREAYWEFDYKKVFHQLFTFMTVELSAFYFD 796


>gi|218295116|ref|ZP_03495952.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218244319|gb|EED10844.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 619

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R        TY    TD   + + RA          +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARFHRLDGYR---TYFLTGTDEHGETVYRAA-----ERAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + +++F K    L   A     R T   H   +  +++ +   G  Y    E 
Sbjct: 66  DPKAFVDRVSERFKKAWELLGI-AYDDFIRTTEERHKRVVQLVLKKVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|114565624|ref|YP_752778.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114336559|gb|ABI67407.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 645

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 75/228 (32%), Gaps = 58/228 (25%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML------MTHYREPID 321
           +G++ LEG KMSKS GN +             + +    +R  ++         Y     
Sbjct: 288 HGWIMLEGGKMSKSKGNVV-------DPVVLVKKYGVDAVRYYLVRELSFGQDGY----- 335

Query: 322 FTVQRLTE------AEILLSKWPQTSTSKGIIDPAVL------SALYNDL-NTVSAIQAL 368
           ++ + L        A  L +   +T          V+       AL  DL NT       
Sbjct: 336 YSEEMLVNRINSDLANDLGNLISRTIAMIERYFDGVIPVSGIAEALDEDLINTAR----- 390

Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK----K 424
            +  RE+T+  D L     +++I+         NK I      L+ +  +  K +     
Sbjct: 391 -EAYREATEKLDKLDF---ASYIMATRKLVSRANKYIDETAPWLLAK-EVAKKERLASVM 445

Query: 425 FSSADYIRKQL-------------ESKGFILEDYKNPDNGQRMTRWKQ 459
           ++ A+ IR  L              ++   + D     +      W +
Sbjct: 446 YNLAESIRIALIMLAPCMPTLLSRANRQIEIFDLNQNLDWDEAAEWGR 493


>gi|147678155|ref|YP_001212370.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146274252|dbj|BAF60001.1| isoleucyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 932

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN I   +++       +   A ++RL +
Sbjct: 577 SVAVTGQAPYRMVLTHGFVVDEQGRKMSKSLGNVIDPAKVI-------KQMGADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR  +  +   L +      K   T
Sbjct: 630 SSADYRGDLAVSQNILKQMTESYRKIRNT 658


>gi|323497796|ref|ZP_08102810.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323317143|gb|EGA70140.1| isoleucyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 942

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 44/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS G
Sbjct: 554 EEYNGASADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGQGRKMSKSIG 613

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 614 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|297170267|gb|ADI21304.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_09F21]
          Length = 793

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 52/150 (34%), Gaps = 38/150 (25%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             E    + +  G +  +G KMSKS GN +   + +E        + A  IR  M+    
Sbjct: 538 GDEPFKKL-LTQGMVLKDGAKMSKSKGNVVDPEKYIEL-------YGADSIRTFMIFA-- 587

Query: 317 REP----IDFTVQRLTEAEILLSKWPQTST------------SKGIIDPAVLS---ALYN 357
             P    ++++   L      L +    S             S   I+  +      + +
Sbjct: 588 -SPPEQSLEWSDNGLEGCHRFLKRLYALSEKIKNRSEDTFKDSNTSIEEEIKELSIKIND 646

Query: 358 D------LNT--VSAIQALHKLARESTKNH 379
           D      LNT   S ++  +KL R   KN 
Sbjct: 647 DYEKRLNLNTVVSSCMEIFNKLNRRIDKNK 676


>gi|302341853|ref|YP_003806382.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
 gi|301638466|gb|ADK83788.1| isoleucyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
          Length = 937

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +GRKMSKS GN I   ++++        + A ++RL +
Sbjct: 578 AMATRGAAPYRQVLTHGFVVDGDGRKMSKSLGNVIAPQKVID-------QYGAEILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   I  +   L +      +   T
Sbjct: 631 AAEDYTVDIRLSNDILKQLAEAYRRIRNT 659


>gi|301630146|ref|XP_002944188.1| PREDICTED: leucyl-tRNA synthetase-like [Xenopus (Silurana)
           tropicalis]
          Length = 908

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 36/143 (25%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D    + Y C    Y     H+G+ R   + D+L R LR       V          
Sbjct: 26  VTEDAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYN--VLMPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A +           +  T  N          +  LA           P      
Sbjct: 84  LPAENAALKNKVP------PAQWTYDNIACMKGQMQAMG-LAIDWSREVATCDPDYYRWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLRMLEKGIAYRKTQVVNWD 159


>gi|163738327|ref|ZP_02145742.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
 gi|161388248|gb|EDQ12602.1| isoleucyl-tRNA synthetase [Phaeobacter gallaeciensis BS107]
          Length = 976

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 630 QACGTKGRAPYRNVVTHGFTLDEKGNKMSKSLGNTIVPEKIV-------QQYGADILRLW 682

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 683 VAQTDYTADQRIGAEILKGVADGYRRLRNT 712


>gi|148264350|ref|YP_001231056.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189083535|sp|A5G3W5|SYR_GEOUR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|146397850|gb|ABQ26483.1| arginyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 561

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 61/418 (14%), Positives = 108/418 (25%), Gaps = 114/418 (27%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT     HIG+ R   + D + RLL     +    +  N  D   +I   A         
Sbjct: 131 PT--GPLHIGHGRGAAIGDTICRLLAAIGWDVTREFYYN--DAGQQIANLALSVQARCLG 186

Query: 91  PINDAISIITSKNTQQFVKDTTR--LA---CLAPTHQPRAT---NHIPQMIYL------- 135
              D            +++D  R  L      A      A      +  +          
Sbjct: 187 IEPDDPRWPLDGYQGDYIRDVARSYLGQETVEADDQHVTAAGDPQDLDAIRRFAVAYLRR 246

Query: 136 -------------------------------IQNIILHGHAYEANNEIIFDTSSIPNYGS 164
                                          +Q +I  GH YE +  +   T++  +   
Sbjct: 247 EQDQDLTAFDVHFDVYSLESALYAEGRVEAVVQRLIDSGHTYEQDGALWLRTTTFGDDKD 306

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
              RK D           YH                   WE  + R              
Sbjct: 307 RVMRKADGGYTYFVPDVAYHLS----------------KWERGFTRV------------- 337

Query: 225 HYLGKVFDIHGGGLDLIFPHH---ENEIAQSCCADRIEK--TANIWIHNGFLNL----EG 275
                   I+  G D    HH       A     +           +H   + +    E 
Sbjct: 338 --------INEQGAD----HHSTITRVRAGLQALNAGIPVGWPEYVLH-QMVTVMRGGEE 384

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            K+SK  G+++T+ +L++              R   +M      + F +    + + L +
Sbjct: 385 VKISKRAGSYVTLRDLIDEVGR-------DATRFFFVMRKPDSQLVFDIDLAKQ-QTLDN 436

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-LHKLARESTKNHDLLPIFNASAHIL 392
                  +   I     +AL       +A    L +L   + +   ++    +   IL
Sbjct: 437 PVYYVQYAHARICSIFENALERGFVLPAAESVPLERLV--TLEEMTIIKTLASFPEIL 492


>gi|162456513|ref|YP_001618880.1| hypothetical protein sce8230 [Sorangium cellulosum 'So ce 56']
 gi|161167095|emb|CAN98400.1| metS [Sorangium cellulosum 'So ce 56']
          Length = 641

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTV 324
                L + G KMSKS GNF T ++LL+      + +    IR  + L++   +P DF  
Sbjct: 421 FGCFHLLVGGEKMSKSRGNFFTGDQLLD-----EKGYSVDQIRYYLALLSLAEKPSDFDF 475

Query: 325 QRLTEAEILLS 335
           ++L E    L+
Sbjct: 476 EKLDERNKFLA 486


>gi|15897428|ref|NP_342033.1| leucyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|284175023|ref|ZP_06388992.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|14423948|sp|P58176|SYL1_SULSO RecName: Full=Leucyl-tRNA synthetase 1; AltName:
          Full=Leucine--tRNA ligase 1; Short=LeuRS 1
 gi|13813661|gb|AAK40823.1| Leucyl-tRNA synthetase (leuS-1) [Sulfolobus solfataricus P2]
 gi|261602113|gb|ACX91716.1| tRNA synthetase valyl/leucyl anticodon-binding protein
          [Sulfolobus solfataricus 98/2]
          Length = 934

 Score = 44.5 bits (104), Expect = 0.034,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  I  D+  R LR         +    T
Sbjct: 41 PYTNSPMHVGHGRTYITADIYARYLRMKGYNVLFPFAFQFT 81



 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 44/119 (36%), Gaps = 8/119 (6%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         +      + NGF+ + GRKMSKS  N  T+++ +   
Sbjct: 575 TGRDLIQNHIPFYIYNHLAIFGEKYLPKRIVINGFVRVGGRKMSKSLRNIYTLSKAI--- 631

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
               + +    +R+A+  T    + +DF    +      L K          I+  +  
Sbjct: 632 ----KEFGVDPVRIALTSTSDLLQDLDFNENLVNPIAEQLKKIYDLIDRLLSINTEIKE 686


>gi|314940361|ref|ZP_07847523.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313640401|gb|EFS04981.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a04]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 636 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 690

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 691 DALPYEYIEGFVQ 703


>gi|311693359|gb|ADP96232.1| arginyl-tRNA synthetase [marine bacterium HP15]
          Length = 561

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 48/344 (13%), Positives = 94/344 (27%), Gaps = 104/344 (30%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY-------------------VRNIT 73
           PT     H+G+ R   + D L RLL     +    +                   V+ +T
Sbjct: 130 PT--GPLHVGHGRGAAIGDCLCRLLEANGYDVTREFYYNDAGAQIDNLALSVQSRVKGLT 187

Query: 74  DID----------DKIIERARQEHPSIPINDAISIITSKN-------TQQFVK------- 109
             D          D I++ A+       +      +T+K         ++F         
Sbjct: 188 PDDESWPADGYRGDYIVDVAKAYLAGDTVTADDREVTAKADPEDRDAIREFAVAYLRREQ 247

Query: 110 --DTTRLACLAPTHQPRATNHIPQMIYL-IQNIILHGHAYEANNEIIFDTSSIPNYGSFS 166
             D          +   ++ +    +   ++ +  +G+ YE +  +   T+   +     
Sbjct: 248 DLDLKAFGVQFDVYFLESSLYEDGKVEATVKRLQENGYTYEQDGAMWLKTTEFGDDKDRV 307

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
            RK D           YH         W+R                              
Sbjct: 308 MRKKDGGYTYFLPDVAYHLDK------WQR------------------------------ 331

Query: 227 LGKVFDIHGGGLDLIFPHH---ENEIAQSCCADRIEK--TANIWIHNG-FLNLEGR--KM 278
            G    I+  G D    HH       A     +        +  +H    +   G+  K+
Sbjct: 332 -GFTTVINEQGAD----HHSTVTRVRAGLQALNAGIPQGWPDYVLHQMVMVTRSGQEVKI 386

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           SK  G+++T+ +L++              R  +        + F
Sbjct: 387 SKRAGSYVTVRDLIDEVGR-------DATRFFLAARRVDSQLTF 423


>gi|257900327|ref|ZP_05679980.1| leucyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257838239|gb|EEV63313.1| leucyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 636 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 690

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 691 DALPYEYIEGFVQ 703


>gi|55738435|gb|AAV62076.1| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 901

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    S     Y      +   G D+IF      I Q
Sbjct: 455 WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 512

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      +   N+ IH    + +GRKMSKS GN I   +++E        + A  +R  +
Sbjct: 513 SLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFL 565

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 566 SNGSAP-GQDVRFSYEKMDASWNFINKI 592


>gi|56459820|ref|YP_155101.1| methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|68565965|sp|Q5R0G6|SYM_IDILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56178830|gb|AAV81552.1| Methionyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 677

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 47/212 (22%), Positives = 67/212 (31%), Gaps = 51/212 (24%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    AD  + T N+W H GF+ + G KMSKS G FI     LE
Sbjct: 291 HFIGKDIIYFHSLFWPAMLKGADFRQPT-NVWAH-GFITVNGTKMSKSKGTFIKARTYLE 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                        +R                     A  L S+                 
Sbjct: 349 -------HLDPEYLRYYF------------------AAKLTSRIDDL------------- 370

Query: 354 ALYNDLN-TVSAIQALHKLARESTKNHDLLPIF--NASAHILGIEVCKEHLNKNISIA-- 408
               DLN T  A +    L  +          F        L   V    L ++  +A  
Sbjct: 371 ----DLNLTDFAQRVNSDLVGKVINIASRCAGFIQKKFDGRLSSNVADSALLEDFQLAGD 426

Query: 409 -IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
            I +L ++R     M+   + AD   + +  K
Sbjct: 427 NIAELYEKREFSRAMRDIMALADRANQYIADK 458


>gi|42520335|ref|NP_966250.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652649|sp|Q73HS9|SYV_WOLPM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42410073|gb|AAS14184.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 864

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 47/135 (34%), Gaps = 16/135 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PT+    HIG+       D + R  R     K V Y     D       + ++  +   +
Sbjct: 42  PTISGKLHIGHIFSYCHTDFIARFQRMLG--KDVFYPIGFDDNGLPTERLVEQTYKTRAK 99

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC-----LAPTHQPRATNHIPQMIYLIQNII 140
           E     + +    +  K+ Q+F +    +       L      + T  + QM   I  + 
Sbjct: 100 EVGREKLIEMCHEVIEKSKQEFKELFKSVGISYDWDLEYHTISKETVTLSQM-SFID-LY 157

Query: 141 LHGHAYEANNEIIFD 155
             G+AY     I++D
Sbjct: 158 NKGYAYRKMQPILWD 172


>gi|116627368|ref|YP_819987.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|116100645|gb|ABJ65791.1| valyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
          Length = 883

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    S     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      +   N+ IH    + +GRKMSKS GN I   +++E        + A  +R  +
Sbjct: 495 SLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|69244089|ref|ZP_00602625.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Enterococcus faecium DO]
 gi|257880449|ref|ZP_05660102.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883262|ref|ZP_05662915.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257891521|ref|ZP_05671174.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894538|ref|ZP_05674191.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258614095|ref|ZP_05711865.1| leucyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260562448|ref|ZP_05832958.1| leucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|261206894|ref|ZP_05921584.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289567063|ref|ZP_06447460.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293563981|ref|ZP_06678388.1| leucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|293569437|ref|ZP_06680733.1| leucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|294613887|ref|ZP_06693825.1| leucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294619132|ref|ZP_06698624.1| leucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|294622191|ref|ZP_06701256.1| leucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314943342|ref|ZP_07850117.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314949258|ref|ZP_07852604.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314953916|ref|ZP_07856774.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993194|ref|ZP_07858575.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314997356|ref|ZP_07862313.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68196546|gb|EAN10972.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Enterococcus faecium DO]
 gi|257814677|gb|EEV43435.1| leucyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257818920|gb|EEV46248.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257827881|gb|EEV54507.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257830917|gb|EEV57524.1| leucyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260073133|gb|EEW61478.1| leucyl-tRNA synthetase [Enterococcus faecium C68]
 gi|260078872|gb|EEW66573.1| leucyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161142|gb|EFD09045.1| leucyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291587857|gb|EFF19709.1| leucyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291593252|gb|EFF24823.1| leucyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291594618|gb|EFF26003.1| leucyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291598288|gb|EFF29380.1| leucyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291604071|gb|EFF33598.1| leucyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313588570|gb|EFR67415.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313592308|gb|EFR71153.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313594115|gb|EFR72960.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313597954|gb|EFR76799.1| leucyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313644357|gb|EFS08937.1| leucyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 68/193 (35%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++ET       + A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +       ++ L +  L+     +  H+  ++ T++++ L    A + ++        +
Sbjct: 636 DENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQLMVFINEAYKV 690

Query: 402 NKNISIAIEKLVQ 414
           +      IE  VQ
Sbjct: 691 DALPYEYIEGFVQ 703


>gi|326793616|ref|YP_004311436.1| isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
 gi|326544380|gb|ADZ89600.1| Isoleucyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
          Length = 940

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 40/103 (38%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  +++ T         A +IRL +
Sbjct: 579 SIAIRGEAPYKQVLTHGFTVDGDGRKMSKSLGNVVSPQKVMSTLG-------ADIIRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
             T Y   +  + + L        +   T+     +    DPA
Sbjct: 632 AATDYTGEMTVSDEILKRVADSYRRIRNTARFMLANLNGFDPA 674


>gi|260950421|ref|XP_002619507.1| hypothetical protein CLUG_00666 [Clavispora lusitaniae ATCC 42720]
 gi|238847079|gb|EEQ36543.1| hypothetical protein CLUG_00666 [Clavispora lusitaniae ATCC 42720]
          Length = 1088

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 46/142 (32%), Gaps = 24/142 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D    G DL+  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 681 PLDSRVSGKDLVPNHLTFFIYTHVALFPKKMWPRGVRANGHLMLNNAKMSKSTGNFLTLE 740

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ------- 339
           + +E        + A   R+A+      + I   +F       A + L+   +       
Sbjct: 741 QCVE-------KFGADASRVALADAG--DTIEDANFDEANANAAILRLTTLKEWCEEITS 791

Query: 340 -----TSTSKGIIDPAVLSALY 356
                 +      D A  + + 
Sbjct: 792 SQDKLRTGEYNFFDQAFENEMN 813


>gi|223995725|ref|XP_002287536.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220976652|gb|EED94979.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 435

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILED 444
            ++++    IE+LV++R +  + K +  +D +R++L+   G  L+D
Sbjct: 261 DISEDELKEIEQLVKKRDMFRRKKDYKQSDTLREELKFEFGVHLDD 306


>gi|220917741|ref|YP_002493045.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955595|gb|ACL65979.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 694

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 59/157 (37%), Gaps = 38/157 (24%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA---- 310
           A  +++   + +H G L + G KMSKS G F+T    LE+           ++R      
Sbjct: 320 ATGLKRPDRMPVH-GHLTVNGEKMSKSRGTFVTGRTYLES------GLDPELLRYFYAAN 372

Query: 311 MLMTHYREPIDFTVQRLTE----------------AEILLSKWPQTSTSKGIIDPAVLSA 354
           +        +D ++                        LL + P   T+   +DP + +A
Sbjct: 373 LGSGV--SDLDLSLDEFRNRINADLANNVANLASRVAALLQRLPGGVTAP--LDPEIAAA 428

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                 T  A++   + A +  +  D++ + + +A +
Sbjct: 429 ------TREAVKGA-RAAYQVLETRDVVRLVSQAASV 458


>gi|161936377|ref|YP_140891.2| valyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|90108442|sp|Q5M111|SYV_STRT1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    S     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      +   N+ IH    + +GRKMSKS GN I   +++E        + A  +R  +
Sbjct: 495 SLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|219871117|ref|YP_002475492.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782407|sp|B8F5E2|SYI_HAEPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219691321|gb|ACL32544.1| isoleucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 938

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 45/125 (36%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +GRKMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATDNKAPYNQVLTHGFTVDEKGRKMSKSLGNVIVPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  +   L  A     +   T+     +    DP        DL     + A
Sbjct: 631 ASTDYTGEIAVSHNILNSAGDTYRRIRNTARFLLANLNGFDPKR------DLVKPEEMIA 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|163747251|ref|ZP_02154606.1| isoleucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379526|gb|EDQ03940.1| isoleucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 973

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 46/147 (31%), Gaps = 15/147 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 621 QSVGTTGRAPYRNVVTHGFTLDAKGMKMSKSIGNTIVPEKIV-------QQYGADILRLW 673

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-NDLNTVSA----- 364
           +  T Y        + L        +   T             A   +            
Sbjct: 674 VAQTDYTADQRIGDEILKGVADSYRRLRNTMRYMLGALNDFSEADRVDPAEMPELERWVL 733

Query: 365 --IQALHKLARESTKNHDLLPIFNASA 389
             +  L K+ R+     D   +F A  
Sbjct: 734 HRVAELDKVVRDGFARFDFQGVFQAVF 760


>gi|154148579|ref|YP_001406468.1| isoleucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|166200203|sp|A7I1S7|SYI_CAMHC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|153804588|gb|ABS51595.1| isoleucyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 921

 Score = 44.5 bits (104), Expect = 0.035,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +      +I  H   ++ +G+KMSKS GN I   E+        + +   ++RL +
Sbjct: 585 SSAINETAPYKSILTHGFTVDEKGQKMSKSVGNVIAPQEV-------AKKYGVEIMRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++ Y   +  +   L +      K   T
Sbjct: 638 GLSDYSSDLKISDNILKQVSEQYRKIRNT 666


>gi|320330524|gb|EFW86503.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
 gi|330873687|gb|EGH07836.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 868

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 41/140 (29%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY----L 135
                 E+ +I  N A +  T +N          L  LA       T   P        L
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 136 IQNIILHGHAYEANNEIIFD 155
           +  +   G  Y  N  + +D
Sbjct: 140 LTRLFEKGVIYRKNGTVNWD 159


>gi|319942764|ref|ZP_08017068.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319803644|gb|EFW00594.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 879

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 44/150 (29%), Gaps = 16/150 (10%)

Query: 13  RKITEFQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           R   +    +     + YVC    Y     H+G+ R   + DV+YR  R           
Sbjct: 25  RAKEDAVDANGHPKPKFYVCSMLPYPSGKLHMGHVRNYTLNDVMYRFHRMKGYNVMTPMG 84

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
            +   +  +    A++  P        +  T  N          L  LA           
Sbjct: 85  WDAFGLPAENAALAKKVQP--------AAWTYSNIADMKAQMEPLG-LAFDWSREVATCK 135

Query: 130 PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           P+     Q     ++  G AY     + +D
Sbjct: 136 PEYYRWNQWLFLKMLEKGIAYRKTQIVNWD 165


>gi|242036539|ref|XP_002465664.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
 gi|241919518|gb|EER92662.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
          Length = 597

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 69/360 (19%), Positives = 109/360 (30%), Gaps = 98/360 (27%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  D + R  R    EK V ++   TD +      A  E       +
Sbjct: 70  VNAPPHMGSAYTTIAADAIARFQRLQ--EKNVIFITG-TD-EHGEKIAASAEASGRNPKE 125

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+S   +    D      +      R T+  H   +      ++  G  Y A+ E 
Sbjct: 126 HCDAISSSY-KTLWADLD----IEYDKFIRTTDSKHEAVVNEFYSRVLNSGDIYRADYEG 180

Query: 153 IFDTS--------------------------SIPNYG-SFSR--RKIDEQ--------KM 175
           ++  S                             NY  + S+   K++E         + 
Sbjct: 181 LYCVSCEEYKDEKELLENNCCPVHLKPCVERKEDNYFFALSKYQHKLEELLTRNPDFVRP 240

Query: 176 GTRVPEKYH--KKNPADFILWKRSTPMEPGWESPWGRGRPG--------WHIECSAMSSH 225
             R+ E     K    DF + + S          WG   P         W        S 
Sbjct: 241 SYRLNEVQGWIKSGLRDFSISRASVE--------WGIPVPNDTKQTIYVWFDALLGYISA 292

Query: 226 YL--GKV------FD------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
            L  G+        D      +H  G D++  H     A    A       +    +GFL
Sbjct: 293 LLDDGEQASLQQAVDHGWPASLHLIGKDILRFHAVYWPAMLMSAGLTVP--DTVFGHGFL 350

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDFTVQR 326
             +G KM KS GN +   +L+E        + A  +R   L    R        D++ +R
Sbjct: 351 TKDGMKMGKSLGNTLEPKDLVER-------FGADAVRYFFL----REVEFGNDGDYSEER 399


>gi|153952173|ref|YP_001397820.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939619|gb|ABS44360.1| isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 917

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVQEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFTKGFSLLLNFLSADLSGIYLD 733


>gi|330828603|ref|YP_004391555.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565]
 gi|328803739|gb|AEB48938.1| Leucyl-tRNA synthetase, class Ia [Aeromonas veronii B565]
          Length = 858

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 56/159 (35%), Gaps = 48/159 (30%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           +H+G       KMSKS  N I    ++E        + A  +RL M+      P    ++
Sbjct: 612 MHSGM-----TKMSKSKNNGIDPQLMVER-------YGADTVRLFMMFA---SPAEMTLE 656

Query: 322 FTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSAL------------------YND-- 358
           ++   +  A+  L +  + +    S G +    ++AL                   +D  
Sbjct: 657 WSDSGVEGAQRFLRRLWRVTFEHVSGGSVAALDVAALTNEQKAVRRELHKTIAKVSDDVG 716

Query: 359 ----LNTVSA--IQALHKLARESTKNHDLLPIFNASAHI 391
                NT  A  ++ ++ LA+      D   +  A   +
Sbjct: 717 RRQTFNTAIAAIMELMNNLAKLGNDEQDRALMQEALEAV 755


>gi|289582256|ref|YP_003480722.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289531809|gb|ADD06160.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 717

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 41/134 (30%), Gaps = 12/134 (8%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH- 87
            CG P      HIG+ R  I  D   R L     E    YV         +   A +E  
Sbjct: 21  TCGLPYANGDLHIGHLRGYIGADAFSRALETLGQE--TAYVSGSDMHGTPVAVNAEEEGV 78

Query: 88  -PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
            P     +          + F  D         TH    T    ++   ++ +   G+ Y
Sbjct: 79  SPEEFAMEWHEQYEETFPK-FNVDFDNYG---HTHDETNTEFTQEI---VRTLDDEGYVY 131

Query: 147 EANNEIIFDTSSIP 160
           E   ++ +D  +  
Sbjct: 132 EKEIQVAYDPDADQ 145


>gi|229823227|ref|ZP_04449296.1| hypothetical protein GCWU000282_00525 [Catonella morbi ATCC 51271]
 gi|229787393|gb|EEP23507.1| hypothetical protein GCWU000282_00525 [Catonella morbi ATCC 51271]
          Length = 808

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 52/137 (37%), Gaps = 14/137 (10%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E    ++     L  +G KMSKS GN +  + +++        + A  +R   M M   
Sbjct: 561 KEPFMKLFNQGMILGTDGNKMSKSKGNVVNPDHVVD-------QYGADTLRVYEMFMGPL 613

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++   L      L + W       G +   +  A        +  +  H+  ++ 
Sbjct: 614 DASIAWSENGLESTRRFLERIWRLYVAEDGSLSERIQDAEN-----PALERVYHQTVKKV 668

Query: 376 TKNHDLLPIFNASAHIL 392
           T+++++L    A + ++
Sbjct: 669 TEDYEILHFNTAISQMM 685


>gi|152993621|ref|YP_001359342.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151425482|dbj|BAF72985.1| leucyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 813

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 9/82 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G + ++G KMSKS GN +  + L+E        + A   RL +L     +
Sbjct: 563 EPFTRL-LTQGMVLMDGAKMSKSKGNTVDPDALVE-------KYGADTARLFILFAAPPQ 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQ 339
           + +++    +  A   + K   
Sbjct: 615 KELEWNDSAVEGAFRFIKKLYD 636


>gi|332685710|ref|YP_004455484.1| valyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332369719|dbj|BAK20675.1| valyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 884

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 39/97 (40%), Gaps = 12/97 (12%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I QS          N  IH    + +GRKMSKS GN I   E++E       S+ A  +R
Sbjct: 498 IFQSLEFTGKRPFENALIHGLIRDEKGRKMSKSLGNGIDPMEVIE-------SYGADALR 550

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
             +       P     F+ +++  A   ++K    S 
Sbjct: 551 WFLCTGS--SPGQDTRFSYEKMDAAWNFINKIWNASR 585


>gi|317970030|ref|ZP_07971420.1| hypothetical protein SCB02_10861 [Synechococcus sp. CB0205]
          Length = 74

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 5/49 (10%)

Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           K ++ R      K  ++A  IR +L+++G  L D         +T W +
Sbjct: 30  KRIEARKAAKTAKGLAAAGGIRNELKAQGIELIDKPGG-----LTEWLR 73


>gi|297526696|ref|YP_003668720.1| leucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
 gi|297255612|gb|ADI31821.1| leucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
          Length = 969

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 38/103 (36%), Gaps = 8/103 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G+  I  H    I         +    +   N  +  EG KMSKS GN I + ++ E  
Sbjct: 608 TGIAHISNHLSFFIYHHIAIFPRKHWPKMITLNEMVIREGAKMSKSKGNVILLRDIAE-- 665

Query: 296 KFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
                 + A + RL +    +    +D+  + +      L K+
Sbjct: 666 -----KYSADLFRLYIAGAANLDTVLDWREKEVERVIDSLRKF 703



 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 25/67 (37%), Gaps = 5/67 (7%)

Query: 12 ERKITE--FQA-IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           R      F+  I+P   + ++  P  Y     HIG+ R   + D++ R  R        
Sbjct: 19 SRWKERKIFEPRIEPDKPKYFITVPYPYTNAPLHIGHGRTYTIGDIIARYKRLRGYNVLF 78

Query: 67 TYVRNIT 73
              +IT
Sbjct: 79 PMAFHIT 85


>gi|240103889|ref|YP_002960198.1| leucyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911443|gb|ACS34334.1| Leucyl-tRNA synthetase (leuS) [Thermococcus gammatolerans EJ3]
          Length = 968

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 57/165 (34%), Gaps = 17/165 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I       R E        NGF  LEG+KMSKS GN +   
Sbjct: 604 PLDWRCSAKDLIPNHLTFFIFNHVAIFRREHWPKGIAVNGFGTLEGQKMSKSKGNVLNFI 663

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++ +  +    D+  + + +    + ++ +  +     +
Sbjct: 664 DAIEENG-------ADVVRLYIMGLAEHDSDFDWRRKEVGKLRRQVERFYELISEFSSYE 716

Query: 349 PAVLSALYNDLNTVSAIQA--LHKLARESTKNHDLLPIFNASAHI 391
                 L        AI    LH+L +        L  F     +
Sbjct: 717 AKEGVEL-------KAIDRWMLHRLNKAIEGTTKALEEFRTRTAV 754



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 23/65 (35%), Gaps = 5/65 (7%)

Query: 14 KITEFQA---IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
          +   F+      P   + Y+     Y     H+G+AR   + DV+ R  R          
Sbjct: 20 EERVFEPDRKAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPM 79

Query: 69 VRNIT 73
            +IT
Sbjct: 80 AWHIT 84


>gi|46199235|ref|YP_004902.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|46196860|gb|AAS81275.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 618

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R        T+    TD   + + RA Q        +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARWHRLDGYR---TFFLTGTDEHGETVYRAAQ-----AAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +    L   A     R T   H   +  +++ +   G  Y    E 
Sbjct: 66  DPKAFVDRVSGRFKRAWDLLGI-AYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|84029572|sp|Q8DGI7|SYI_THEEB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 953

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRLAM 311
                     +  H   L+ +GRKMSKS GN     E++E  K   +   + A V+RL +
Sbjct: 582 AVKGQAPYKAVLTHGFVLDEQGRKMSKSLGNVTDPREVIEGGKNQKQDPPYGADVLRLWV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               Y   +      L +   +  K   T+ 
Sbjct: 642 SSVDYANDVPIGKNILRQLADVYRKIRNTAR 672


>gi|322373832|ref|ZP_08048367.1| leucine--tRNA ligase [Streptococcus sp. C150]
 gi|321277204|gb|EFX54274.1| leucine--tRNA ligase [Streptococcus sp. C150]
          Length = 833

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EDKL 721


>gi|322421080|ref|YP_004200303.1| leucyl-tRNA synthetase [Geobacter sp. M18]
 gi|320127467|gb|ADW15027.1| leucyl-tRNA synthetase [Geobacter sp. M18]
          Length = 824

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 22/166 (13%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E  +N+ +  G +  +G KMSKS GN +  N L+E        + A   RL  +      
Sbjct: 564 EPFSNL-LTQGMVIKDGAKMSKSKGNVVDPNALIER-------YGADTARLFSLFAAPPE 615

Query: 318 EPIDFTVQRLTEAEILLSKWPQ-------TSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           + +D++ Q +  +   L++  +            G ++   LSA   +L      +A+HK
Sbjct: 616 KDLDWSDQGVDGSYRFLNRVWRLVFDVLPAIKGAGSVETDKLSAEGKNLR-----RAVHK 670

Query: 371 LARESTKNHDLLPIFN-ASAHILGIEVCKEHLNKNISIAIEKLVQE 415
             ++ +++ +    FN A A ++ +    +  +   +     +V+E
Sbjct: 671 TIKKVSEDIEERFHFNTAIAAVMELVNAIQAFSAKAAPENVAVVRE 716


>gi|149911110|ref|ZP_01899737.1| leucyl-tRNA synthetase [Moritella sp. PE36]
 gi|149805860|gb|EDM65849.1| leucyl-tRNA synthetase [Moritella sp. PE36]
          Length = 864

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 51/151 (33%), Gaps = 37/151 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQR 326
           N  ++    KMSKS  N I    +++        + A  +RL M+      + +++    
Sbjct: 614 NELVHTGMTKMSKSKNNGIDPQTMIDR-------FGADTVRLFMMFAAPADQTLEWQDSA 666

Query: 327 LTEAEILLSKWPQTS---TSKGIIDPAVLSALY------------------ND------L 359
           +  A   L +    +    SKG +    ++AL                   +D       
Sbjct: 667 VEGAHRFLRRIWTLAYNHISKGDVADLDVAALNGKQKELRREVHKTIAKVSDDIDRRQTF 726

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           NT  AI ++ +L  + TK         A   
Sbjct: 727 NT--AIASVMELMNKLTKAPQEAEQDRALLQ 755


>gi|55981267|ref|YP_144564.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|62296622|sp|P23395|SYM_THET8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55772680|dbj|BAD71121.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 618

 Score = 44.5 bits (104), Expect = 0.036,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R        T+    TD   + + RA Q        +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARWHRLDGYR---TFFLTGTDEHGETVYRAAQ-----AAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +    L   A     R T   H   +  +++ +   G  Y    E 
Sbjct: 66  DPKAFVDRVSGRFKRAWDLLGI-AYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|260583637|ref|ZP_05851385.1| leucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158263|gb|EEW93331.1| leucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 14/138 (10%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTH 315
             E    ++     L     KMSKS GN +  ++++       R + A  +RL  M M  
Sbjct: 556 NKEPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDVV-------RQYGADTLRLYEMFMGP 608

Query: 316 YREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
               I ++ + L  +   L + W      +G +   + +      N  S  +  H+  ++
Sbjct: 609 LDASIAWSEKGLEGSRKFLERVWRLLVDEEGKLRDRITT-----FNDGSLDKIYHQTVKK 663

Query: 375 STKNHDLLPIFNASAHIL 392
            T++++ L    A + ++
Sbjct: 664 VTEDYEALRFNTAISQMM 681


>gi|307153063|ref|YP_003888447.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306983291|gb|ADN15172.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 972

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S   + I     +  H   L+ +GRKMSKS GN +    +
Sbjct: 578 DIYLEGSDQHRGWFQSSLLTSAATNGIAPYKTVLTHGFVLDEQGRKMSKSEGNIVDPAMI 637

Query: 292 LETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   K   +   + A V+RL +    Y   +      L +   + +K   T+ 
Sbjct: 638 INGGKDQKKEPPYGADVLRLWVSSVDYSSDVPIGQNMLKQLGDIRNKIRNTAR 690


>gi|169350330|ref|ZP_02867268.1| hypothetical protein CLOSPI_01091 [Clostridium spiroforme DSM 1552]
 gi|169293113|gb|EDS75246.1| hypothetical protein CLOSPI_01091 [Clostridium spiroforme DSM 1552]
          Length = 798

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 21/146 (14%)

Query: 257 RIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMT 314
             E    ++ H G  L     KMSKS GN +  ++++ +         A  +RL  M M 
Sbjct: 555 CKEPWQRLF-HQGMILGDNNEKMSKSRGNVVNPDDIVASHG-------ADALRLYEMFMG 606

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-----------NDLNTVS 363
                + ++   L  A   L +  +    +  +      +L            +D  ++ 
Sbjct: 607 PLEAALPWSTNGLDGARKWLDRVYRLFIEQDKLSDENDHSLDRVYHQTVKKVTDDFESLG 666

Query: 364 AIQALHKLARESTKNHDLLPIFNASA 389
              A+ ++     + +    ++   A
Sbjct: 667 FNTAISQMMIFINECYKAPTVYKEYA 692


>gi|50954430|ref|YP_061718.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50950912|gb|AAT88613.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 589

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 40/134 (29%), Gaps = 11/134 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +    ++   TD   + I R        P   
Sbjct: 21  VNDVPHIGHAYTEVAADVLVRWHRQAGED---VWLLAGTDEHGQKILRTAAAQRLSPAEW 77

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
              ++              L   +     R T   H   +I  +  +   G  YE   E 
Sbjct: 78  TDRLVHDSW----RPLLEALRI-SADDFIRTTEDRHKVVVIAFLTLLREKGLVYEGTYEG 132

Query: 153 IFDTSSIPNYGSFS 166
            +       Y   S
Sbjct: 133 FYCVG-CEEYKQES 145


>gi|58578735|ref|YP_196947.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417361|emb|CAI26565.1| Valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 812

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 18/173 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           I Q+          NI + +G+ L  +  KMSKS GN +  N+LL       + + A VI
Sbjct: 508 ILQAYYHHNSIPWENI-MVSGWCLAADKSKMSKSKGNALIPNQLL-------QEYGADVI 559

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ- 366
           R     +       F+ + L   + L++K    S    +           DLN V+    
Sbjct: 560 RYWAANSRLGSDTVFSDEVLQLGKRLVTKLWNASKFVSMFVSQCQIP---DLNCVTETMD 616

Query: 367 --ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
              L KL +   K  +   +F        ++  +    K+      +LV++R 
Sbjct: 617 KWVLTKLYKVIVKATESFNVFEYCVA---LDYIESFFWKDFCDNYLELVKKRA 666


>gi|57238808|ref|YP_179944.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819291|sp|Q5HC99|SYV_EHRRW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57160887|emb|CAH57790.1| valyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 810

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 18/173 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           I Q+          NI + +G+ L  +  KMSKS GN +  N+LL       + + A VI
Sbjct: 506 ILQAYYHHNSIPWENI-MVSGWCLAADKSKMSKSKGNALIPNQLL-------QEYGADVI 557

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ- 366
           R     +       F+ + L   + L++K    S    +           DLN V+    
Sbjct: 558 RYWAANSRLGSDTVFSDEVLQLGKRLVTKLWNASKFVSMFVSQCQIP---DLNCVTETMD 614

Query: 367 --ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
              L KL +   K  +   +F        ++  +    K+      +LV++R 
Sbjct: 615 KWVLTKLYKVIVKATESFNVFEYCVA---LDYIESFFWKDFCDNYLELVKKRA 664


>gi|171778747|ref|ZP_02919843.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282704|gb|EDT48128.1| hypothetical protein STRINF_00695 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 883

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|325693816|gb|EGD35735.1| leucine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 861

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 43/215 (20%), Positives = 72/215 (33%), Gaps = 60/215 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 637 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 689

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 690 DRVYRLITSKEIVADNNGALDKVYNETVKSVTEQIEELKFNT--AIAQLMIFVNAANKEE 747

Query: 380 DL-LPIFNASAHILG-------------IEVCKEHL----------NKNISIAIEKLVQE 415
            L +        +L              +    E +          +K +   +E +VQ 
Sbjct: 748 KLYVEYAKGFVQLLAPFAPHLAEELWQSLAQTDESISYVAWPTYDESKLVEAEVEIVVQI 807

Query: 416 ----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               R  L+  K  S     R++L+     L D K
Sbjct: 808 KGKVRAKLVVAKDLS-----REELQE--IALADEK 835


>gi|320157349|ref|YP_004189728.1| isoleucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932661|gb|ADV87525.1| isoleucyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 948

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 582 SIAMKGKAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 635 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|317010209|gb|ADU80789.1| isoleucyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 920

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 15/149 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCILNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYN----DLNTV 362
           +    Y+  +  +     + E    K+  T      +   +D   L   ++    D   +
Sbjct: 637 VAFNDYQNDLRVSQTFFIQTEQHYKKFRNTLKFLLANFSDMDLKDLERPHDFSPLDHFIL 696

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHI 391
            A++ +      + + HD +   N     
Sbjct: 697 EALETISAGVNSAFEEHDFVKGLNILMAF 725


>gi|296242280|ref|YP_003649767.1| leucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094864|gb|ADG90815.1| leucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 968

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 12/122 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G+  I  H    +         +K   I   N  +  EG KMSKS GN I + ++    
Sbjct: 610 TGIPHISNHLTFYLFHHTAIFPEDKWPRIISLNETVIREGAKMSKSKGNVIPLRDI---- 665

Query: 296 KFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWP----QTSTSKGIIDPA 350
               R++ A + R  +         +D+  + +      L ++     Q  +  G I   
Sbjct: 666 ---ARNYSADLFRFYIASAASLDSVLDWKQKEIELVLDGLYRFTNIMLQARSIGGEIPSD 722

Query: 351 VL 352
             
Sbjct: 723 FY 724



 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 16/100 (16%), Positives = 35/100 (35%), Gaps = 8/100 (8%)

Query: 17  EFQA-IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
            F+  ++ S ++ ++  P  Y     HIG+ R   + D++ R  R            +IT
Sbjct: 29  VFEPKVEESKVKYFLTVPYPYTNGPLHIGHGRTYTIGDIIARFKRLTGYNVLFPMAFHIT 88

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
                II  + +          +          +++D  +
Sbjct: 89  --GTPIIAISERIANKDAKTLDMY---RSYISYYIEDREK 123


>gi|187479831|ref|YP_787856.1| arginyl-tRNA synthetase [Bordetella avium 197N]
 gi|109894974|sp|Q2KTN9|SYR_BORA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|115424418|emb|CAJ50971.1| arginyl-tRNA synthetase [Bordetella avium 197N]
          Length = 561

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 56/328 (17%), Positives = 104/328 (31%), Gaps = 71/328 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+AR   + D + RL      +    +  N     I ++   +  RAR   
Sbjct: 131 PT--GPLHVGHARQAALGDAICRLFDASGWDVTREFYYNDAGNQIQNLAISVQARARGIG 188

Query: 88  PSIPINDAISIITSKNTQQFVKDTTR-----LACLAPTHQP-RATNHIPQMIYLIQNIIL 141
           P     DA           ++ D  R      +  A   +P +A+ +I      +++I  
Sbjct: 189 P-----DAPEWPADGYKGDYIADIARDYLAQASVQAADGEPVQASGNIDD----LEDIRA 239

Query: 142 HGHAY---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRS 197
              AY   E + ++        N+   S        +               D  LW R+
Sbjct: 240 FAVAYLRREQDLDLQAFGLKFDNFFLESSLYTSGRVERTVETLIAKGHTYEQDGALWLRT 299

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF---DI--HGGGLDLIFPH-------- 244
           T          G G      +   M     G  +   D+  H    +  F H        
Sbjct: 300 TE--------LGTG----DDKDRVMRKSEGGYTYFVPDVAYHLAKWERGFHHAINIQGSD 347

Query: 245 HENEIAQSCCADRI------EKTANIWIHNGFLNL----EGRKMSKSNGNFITINELLET 294
           H   +A+     +       ++     +H   + +    E  K+SK  G+++T+ +L+E 
Sbjct: 348 HHGTVARVRAGLQGLEEGIPKEFPAYVLHK-MVKVMRGGEEVKISKRAGSYVTMRDLIEW 406

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF 322
                       +R  ++    R   +F
Sbjct: 407 VGR-------DAVRYFLIQR--RADTEF 425


>gi|116754239|ref|YP_843357.1| isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121692931|sp|A0B7P3|SYI_METTP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116665690|gb|ABK14717.1| Isoleucyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 1049

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 10/86 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       ++ +H   L+ +GRKMSKS GN +   +++E        + A  +R  +
Sbjct: 571 SMVAFGRAPYKSVLMHGFTLDEQGRKMSKSIGNVVHPEDVVER-------YGADTLRFYV 623

Query: 312 LMTH--YREPIDFTVQRLTEAEILLS 335
           L ++  + E + F+ +       +L+
Sbjct: 624 LSSNAPW-EDLHFSWEGAMNVNRMLN 648


>gi|116754085|ref|YP_843203.1| lysyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|116665536|gb|ABK14563.1| lysyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 497

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 39/96 (40%), Gaps = 9/96 (9%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI---IERARQEHP 88
           G T     HIGN R ++  D +YR L     E  + Y+ +  D   ++   ++ + +EH 
Sbjct: 24  GITPSGPVHIGNLREVMTADAVYRALVDRGVEARLIYIADTYDRLRRLYPFLDESFREHV 83

Query: 89  SIPIND------AISIITSKNTQQFVKDTTRLACLA 118
             P+++        S  +    Q F++    L    
Sbjct: 84  GKPLSEIPCPEGCCSSYSEHFLQPFLRAMDLLDIKP 119


>gi|71901178|ref|ZP_00683282.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
 gi|71729060|gb|EAO31187.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
          Length = 943

 Score = 44.5 bits (104), Expect = 0.037,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D          H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + + L        +   T+ 
Sbjct: 648 TDYSNEMSLSQEILKRTTDAYRRIRNTAR 676


>gi|322376122|ref|ZP_08050631.1| valine--tRNA ligase [Streptococcus sp. C300]
 gi|321278890|gb|EFX55934.1| valine--tRNA ligase [Streptococcus sp. C300]
          Length = 883

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 12/126 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW    SA    Y      +   G D+IF      I QS      +   N+ IH    + 
Sbjct: 459 GWPDMDSADFKRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 517 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 568

Query: 332 ILLSKW 337
             ++K 
Sbjct: 569 NFINKI 574


>gi|312277882|gb|ADQ62539.1| Valyl-tRNA synthetase, putative [Streptococcus thermophilus ND03]
          Length = 883

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    S     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      +   N+ IH    + +GRKMSKS GN I   +++E        + A  +R  +
Sbjct: 495 SLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|294012492|ref|YP_003545952.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292675822|dbj|BAI97340.1| valyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 936

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 11/139 (7%)

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFD 232
             G+R        +PA  +L++    ++  + S  W  G  GW  E   +  HY     D
Sbjct: 492 IAGSRTEAAEIGHHPAKAVLYRDPDVLDTWFSSALWPFGTLGWPDETETLKRHY---PND 548

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D++F        Q            +++H      +G+KMSKS GN +    L+
Sbjct: 549 LLISGFDILFFWDARMAMQGMEFMGDVPWRKLYLHGLVRAADGQKMSKSKGNVVDPLGLI 608

Query: 293 ETKKFGGRSWPAPVIRLAM 311
           +        + A  +R  M
Sbjct: 609 DR-------FGADALRFFM 620


>gi|292654629|ref|YP_003534526.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372251|gb|ADE04478.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 958

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 53/162 (32%), Gaps = 25/162 (15%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H               +     +  G   LEG KMS S G+ +   E +   
Sbjct: 589 SGNDLITNHLTFYQFHHGELFDEPQWPRGIVIMGMGLLEGEKMSSSKGHVVLPGEAIG-- 646

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRL----TEAEILLSKWPQTSTSKGIID 348
                 + A  +R  +L +   EP    D+    +     + E   ++  +  T  G  D
Sbjct: 647 -----EYGADTVRFFLLNSA--EPWQDYDWRDDLVGSVHDQLERFWNRAQEIITDPGPDD 699

Query: 349 PAVLSALYNDLNTVS--AIQALHKLARESTKNHDLLPIFNAS 388
                    DL TV    +  L    R+ T   D     +AS
Sbjct: 700 QP-------DLETVDRWLLSKLQDTVRDVTTAMDEAETRSAS 734


>gi|257869995|ref|ZP_05649648.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804159|gb|EEV32981.1| valyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 879

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 51/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E SA    Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 461 GWPDENSADYQRYFPTNTLV--TGYDIIAFWVSRMIFQSLEFTGKRPFENVLIHGLIRDE 518

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   E++E        + A  +R  +        + + F+ +++  A 
Sbjct: 519 QGRKMSKSLGNGIDPMEVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAW 570

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 571 NFINKIWNASR 581


>gi|258507843|ref|YP_003170594.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257147770|emb|CAR86743.1| Leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|259649171|dbj|BAI41333.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 803

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 35/152 (23%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    ++     L     KMSKS GN +  +++++        + A  +RL  M 
Sbjct: 552 AIPNKEPFQRLFNQGMILGDNHEKMSKSKGNVVNPDDVVD-------EYGADTLRLYEMF 604

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV-------------------- 351
           M      I ++   L  A   L + W      +G +   +                    
Sbjct: 605 MGPLDAGIAWSTDGLAGARKFLDRVWSAFIDDEGKLRDRITTINDGRLDKVYNETVKKVT 664

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHDL 381
               AL+   NT  AI  +      + K+ DL
Sbjct: 665 EDYEALH--FNT--AIAQMMVFINSARKDDDL 692


>gi|254172881|ref|ZP_04879555.1| leucyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033037|gb|EEB73865.1| leucyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 965

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 57/163 (34%), Gaps = 14/163 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I       R E        NGF  LEG+KMSKS GN +   
Sbjct: 602 PLDWRCSAKDLIPNHLTFFIFNHTAIFRREHWPKGIAVNGFGTLEGQKMSKSKGNVLNFI 661

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++ +  +    D+  + + +    + ++ +  +     +
Sbjct: 662 DAIEENG-------ADVVRLYIMGLAEHDSDFDWRRKEVGKLRRQVERFYELISEFSGYE 714

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                    D      +  LH+L +       +L  F     +
Sbjct: 715 TEETELKNID----RWM--LHRLNKAIEGTTKVLEEFRTRTAV 751



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%), Gaps = 5/65 (7%)

Query: 14 KITEFQA---IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
          K   F+      P + + Y+     Y     H+G+AR   + DV+ R  R          
Sbjct: 18 KERVFEPDRNAKPKDKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPM 77

Query: 69 VRNIT 73
            +IT
Sbjct: 78 AWHIT 82


>gi|199599096|ref|ZP_03212501.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229551697|ref|ZP_04440422.1| leucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539090|ref|YP_003173589.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|199589989|gb|EDY98090.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|229314946|gb|EEN80919.1| leucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257150766|emb|CAR89738.1| Leucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 803

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 49/152 (32%), Gaps = 35/152 (23%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    ++     L     KMSKS GN +  +++++        + A  +RL  M 
Sbjct: 552 AIPNKEPFQRLFNQGMILGDNHEKMSKSKGNVVNPDDVVD-------EYGADTLRLYEMF 604

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV-------------------- 351
           M      I ++   L  A   L + W      +G +   +                    
Sbjct: 605 MGPLDAGIAWSTDGLAGARKFLDRVWSAFIDDEGKLRDRITTINDGRLDKVYNETVKKVT 664

Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHDL 381
               AL+   NT  AI  +      + K+ DL
Sbjct: 665 EDYEALH--FNT--AIAQMMVFINSARKDDDL 692


>gi|37678871|ref|NP_933480.1| isoleucyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|81758302|sp|Q7MNM8|SYI_VIBVY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|37197612|dbj|BAC93451.1| isoleucyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 948

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 582 SIAMKGKAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 635 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|27363971|ref|NP_759499.1| isoleucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|81449064|sp|Q8DES7|SYI_VIBVU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27360088|gb|AAO09026.1| isoleucyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 948

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 582 SIAMKGKAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 635 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 665


>gi|26554387|ref|NP_758321.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|26454397|dbj|BAC44725.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 1087

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   ++ DVL R  +    E    ++  + +   KI E+A++      +N     
Sbjct: 584 PHIGHAFTTLIADVLTRYKKKLGYE--TFFITGMDEHGQKIEEKAKE------LNLKPQE 635

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  K  + F      L     +H  R T   H   +      ++     Y    + ++  
Sbjct: 636 LVDKYAKVFDNLWKLLGIEY-SHFIRTTAEYHKNVVQETFSELLKKDFIYLGVWKGLYCV 694

Query: 157 SSIPNY 162
           S   NY
Sbjct: 695 SCEENY 700


>gi|71022049|ref|XP_761255.1| hypothetical protein UM05108.1 [Ustilago maydis 521]
 gi|46097749|gb|EAK82982.1| hypothetical protein UM05108.1 [Ustilago maydis 521]
          Length = 1111

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +                  NG L L G+KMSKS GN +++ 
Sbjct: 698 PMDLRSSGKDLIPNHLTFCVYVHSALFPEHHWPRAIRANGHLMLNGKKMSKSTGNSLSLR 757

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   RL++
Sbjct: 758 QSVE-------KFGADATRLSL 772


>gi|148987995|ref|ZP_01819458.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147926459|gb|EDK77532.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 833

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNATNKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|28199318|ref|NP_779632.1| isoleucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182682043|ref|YP_001830203.1| isoleucyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|81438538|sp|Q87BL5|SYI_XYLFT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|254782456|sp|B2I6V2|SYI_XYLF2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28057424|gb|AAO29281.1| isoleucyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632153|gb|ACB92929.1| isoleucyl-tRNA synthetase [Xylella fastidiosa M23]
          Length = 943

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D          H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + + L        +   T+ 
Sbjct: 648 TDYSNEMSLSQEILKRTTDAYRRIRNTAR 676


>gi|15839009|ref|NP_299697.1| isoleucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
 gi|81546990|sp|Q9PAS7|SYI_XYLFA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|9107606|gb|AAF85217.1|AE004051_1 isoleucyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 943

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D          H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + + L        +   T+ 
Sbjct: 648 TDYSNEMSLSQEILKRTTDAYRRIRNTAR 676


>gi|289168700|ref|YP_003446969.1| leucyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288908267|emb|CBJ23109.1| leucyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 833

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKAVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EDKL 721


>gi|207110316|ref|ZP_03244478.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 41

 Score = 44.5 bits (104), Expect = 0.038,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 6/37 (16%)

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
           K F  AD IR++L  +   L D        + T W++
Sbjct: 9   KDFLKADRIREELLKQKIALMDT------PQGTIWEK 39


>gi|332290181|ref|YP_004421033.1| methionyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330433077|gb|AEC18136.1| methionyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 680

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 72/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   +   NI++H G++ + G KMSKS G FI     LE
Sbjct: 289 HFIGKDIVYFHSLFWPAMLEGAGYRKP-NNIFVH-GYVTVNGEKMSKSRGTFIQAKTYLE 346

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                        +R      L    R + +D  ++   +      ++K     S + G 
Sbjct: 347 -------HLDPECLRYYYAAKLSG--RIDDLDLNLEDFVQRVNSDIVNKLVNLASRNAGF 397

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L + L+  +  Q   + A +  ++++      A   I+ + +   +++++  
Sbjct: 398 IQKRFGGKLADRLHDQALWQEFSQQAEQIAQHYENREYNKAIREIMNLCDKANKYVDETA 457

Query: 406 SIAIEK 411
              I K
Sbjct: 458 PWVIAK 463


>gi|314933910|ref|ZP_07841275.1| leucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654060|gb|EFS17817.1| leucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVINPDDIVSSHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           T  G ++  ++ +    L+     +  ++  ++ T++ D L    A + ++
Sbjct: 636 TEDGSLNNKIVESNDKSLD-----KVYNQTVKKVTEDFDALSFNTAISQLM 681


>gi|302418792|ref|XP_003007227.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
 gi|261354829|gb|EEY17257.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
          Length = 620

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 41/130 (31%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   MI+ D L R        +   Y    TD     ++RA  +        
Sbjct: 77  VNASPHVGHMYTMILADSLKRWQTLRG--RDALYCTG-TDEHGMKVQRAAAKQ-----GI 128

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                   N  +F +              R T  +H+  + +    +   GH YE+ +  
Sbjct: 129 PPKAFCDNNADKFRQLAAACGIDN-DFFVRTTDADHMDAVQHFWHLLRAGGHVYESTHSG 187

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 188 WYCVSDECFY 197



 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 49/301 (16%), Positives = 87/301 (28%), Gaps = 93/301 (30%)

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-KYHKKNPADFI----LWKRS--- 197
           Y+ N + I   + +    S+ R  +++  +   V    +  + P D      +W  +   
Sbjct: 247 YDDNPDWIVPRARMNEVVSWVRHNLEDLSISRPVSRFDWGIRVPDDPSQTIYVWVDALIN 306

Query: 198 ---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
                  P W        PG          H  G   D+H  G D++  H     A    
Sbjct: 307 YLTKAGFPAWA-------PG--------DEHSGGWPADVHVIGKDIVRFHGVYWPALLLA 351

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
              +     +  H  +  L  +KMSKS GN +   + +E        W    +R  ML  
Sbjct: 352 V-GLPPPKQLLSHAHW-TLGKKKMSKSVGNVVNPFQAIER-------WDLDTMRYFMLRD 402

Query: 314 ---------------THYREPIDFTVQRL------------------------------- 327
                            Y + + +T+                                  
Sbjct: 403 GGLENDADYENRFIFARYEKDLQWTLGNALSRITRSTKWNVADAVRWARDHHHQAAAAAA 462

Query: 328 -----------TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
                        A+   S+  + +         + +A+  DLN  +AI+A   L  E+ 
Sbjct: 463 AHGAEVEAEVEASADAPQSRQRRLAALVDETPRVMAAAMETDLNPSAAIKAAMTLLVEAN 522

Query: 377 K 377
           K
Sbjct: 523 K 523


>gi|229192065|ref|ZP_04319034.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228591391|gb|EEK49241.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10876]
          Length = 921

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|223043614|ref|ZP_03613659.1| leucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222443102|gb|EEE49202.1| leucyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 62/171 (36%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVINPDDIVSSHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           T  G ++  ++ +    L+     +  ++  ++ T++ D L    A + ++
Sbjct: 636 TEDGSLNNKIVESNDKSLD-----KVYNQTVKKVTEDFDALSFNTAISQLM 681


>gi|207340642|gb|EDZ68930.1| YPL160Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 1090

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 682 PLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNSKMSKSTGNFMTLE 741

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   R+A 
Sbjct: 742 QTVE-------KFGADAARIAF 756


>gi|218899049|ref|YP_002447460.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|254782363|sp|B7IUQ5|SYI_BACC2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218542524|gb|ACK94918.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 921

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|284162686|ref|YP_003401309.1| lysyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
 gi|284012683|gb|ADB58636.1| lysyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
          Length = 496

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 54/323 (16%), Positives = 96/323 (29%), Gaps = 56/323 (17%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHP 88
           G T     HIGN R M+  D + R +    G+  + YV +  D        + +  +E+ 
Sbjct: 26  GITPSGPIHIGNLREMLTADAIRRAIIDKGGKAEIVYVADTFDPLRRRYPFLPKEYEEYV 85

Query: 89  SIPI------NDAISIITSKNTQQFVKDTTRLA----CLAPTHQPRATNHIP------QM 132
            +P+       D          Q F++    L             R   +        Q 
Sbjct: 86  GMPLSLIPDPEDCHDNYAEHFLQPFLESLEILEIPVVVKKADEMYRNGEYEEVTKISLQQ 145

Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI---DEQKMGTRVPEKYHKKNPA 189
              I  I+      +  ++         N    +  KI   D++++          +   
Sbjct: 146 RDNIARILEEVTGRKIESDWYPFMPLCKNCKRLTTTKIVSFDDKRISYVCSCGDEGEVSY 205

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY--LGKVFDIHGGGLDLIFPHHEN 247
                      +  W   W        I C      +   G  +D    G  L       
Sbjct: 206 --------REGKLVWRVDWPARWRILGITCEPFGKDHASAGGSYD---TGKRL------- 247

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELLETKKFGGRSWPAPV 306
               +     IE      +   ++NL+G   MS S G  + + E +E         P  +
Sbjct: 248 ----AREIFGIEPP--YPVPYEWINLKGVGAMSSSKGVVVPVREFIEIV-------PPEI 294

Query: 307 IRLAMLMTHYREPIDFTVQRLTE 329
           +R  ++    ++ IDF    L E
Sbjct: 295 VRYMIIRVKPKKHIDFDPANLLE 317


>gi|259149996|emb|CAY86799.1| Cdc60p [Saccharomyces cerevisiae EC1118]
          Length = 1090

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 682 PLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNSKMSKSTGNFMTLE 741

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   R+A 
Sbjct: 742 QTVE-------KFGADAARIAF 756


>gi|254510090|ref|ZP_05122157.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
 gi|221533801|gb|EEE36789.1| arginyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
          Length = 581

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 59/333 (17%), Positives = 108/333 (32%), Gaps = 60/333 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +  D L  LL Y   +    Y  N       ++ R+  E      
Sbjct: 133 PT--GPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLARSAYERYREAN 190

Query: 93  NDAISIITSKNTQQFVKDT-TRLACLAPTHQP--RATNHI--------PQMIYLIQNIIL 141
             +  I        ++      L             +  +          M+ LI+  + 
Sbjct: 191 GLSPEIAEGLYPGDYLIPIGEALKAKYGDSLIDKPESEWLEDLRNFATDAMMDLIRADLK 250

Query: 142 HGHAYEANNEIIFDTSSIPNYGSF--SRRKI-DEQKMGTRVPEKYHKKNPADF-----IL 193
              A     ++ F   S+   G    + + + D+  +   V E    K P D+      L
Sbjct: 251 ---ALGVEMDVFFSEKSLYGTGRIEAALQSLTDKGLIYEGVLEPPKGKKPEDWEPREQTL 307

Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HGGGLDLIFP 243
           +K +   +   + P  +    W      ++ HY         + D+    HGG +  +  
Sbjct: 308 FKSTEHGDDV-DRPVKKSDGAWTYFAPDIAYHYDKVSRGFDALIDVFGADHGGYVKRM-- 364

Query: 244 HHENEIAQSCCADRI-------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
               + A S  +D          +   +W +         KMSK  GNF+T+ ++++   
Sbjct: 365 ----KAAVSALSDGKVSLDIKLTQLVKLWKNGEPF-----KMSKRAGNFVTLRDVVDQVG 415

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
                    V R  ML      P+DF   ++ E
Sbjct: 416 -------PDVTRFVMLTRKNDAPLDFDFDKVLE 441


>gi|151942639|gb|EDN60985.1| leucyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
 gi|190407800|gb|EDV11065.1| leucine-tRNA ligase [Saccharomyces cerevisiae RM11-1a]
 gi|256274196|gb|EEU09104.1| Cdc60p [Saccharomyces cerevisiae JAY291]
          Length = 1090

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 682 PLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNSKMSKSTGNFMTLE 741

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   R+A 
Sbjct: 742 QTVE-------KFGADAARIAF 756


>gi|6325097|ref|NP_015165.1| Cdc60p [Saccharomyces cerevisiae S288c]
 gi|135141|sp|P26637|SYLC_YEAST RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|3508|emb|CAA44671.1| Leucyl-tRNA synthetase (cytoplasmic) [Saccharomyces cerevisiae]
 gi|1370340|emb|CAA97865.1| CDC60 [Saccharomyces cerevisiae]
 gi|1403549|emb|CAA65561.1| P2564 protein [Saccharomyces cerevisiae]
 gi|285815382|tpg|DAA11274.1| TPA: Cdc60p [Saccharomyces cerevisiae S288c]
          Length = 1090

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I         +        NG L L   KMSKS GNF+T+ 
Sbjct: 682 PLDVSISGKDLIPNHLTFFIYTHVALFPKKFWPKGIRANGHLMLNNSKMSKSTGNFMTLE 741

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   R+A 
Sbjct: 742 QTVE-------KFGADAARIAF 756


>gi|46204292|ref|ZP_00050208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 159

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 42/130 (32%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +     V+ +T  D+      + E  +     
Sbjct: 16  VNDKPHIGHAYTTLACDVLARFKRLDGFD-----VKFLTGTDEH---GQKVEKSAEAFGV 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N+  F +    L C       R T   H      L   ++  G  Y    E 
Sbjct: 68  TPKALADQNSANFRELAKILGCTNDDF-IRTTEERHKVACQALWDKLLAKGDIYLGAYEG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAFY 136


>gi|326942237|gb|AEA18133.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 881

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSVLWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|311069301|ref|YP_003974224.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310869818|gb|ADP33293.1| valyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 880

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R  +       P   + F+ +++       +K W  +  +   +
Sbjct: 540 ID-------QYGADSLRYFLATGS--SPGQDLRFSYEKVESTWNFANKIWNASRFALMNM 590

Query: 348 DPAVLSALY 356
           D      L 
Sbjct: 591 DGMTYDELD 599


>gi|262370952|ref|ZP_06064275.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262314028|gb|EEY95072.1| isoleucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 947

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN IT  ++++     G       +R  +    YR  +    + 
Sbjct: 604 HGFVVDEKGRKMSKSLGNIITPQDIIKDMGADG-------LRFWIASADYRYEMTAGKEI 656

Query: 327 LTEAEILLSKWPQT 340
              A     +   T
Sbjct: 657 FNRASDGYRRIRNT 670


>gi|229123998|ref|ZP_04253190.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228659300|gb|EEL14948.1| Valyl-tRNA synthetase [Bacillus cereus 95/8201]
          Length = 881

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|242309623|ref|ZP_04808778.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523624|gb|EEQ63490.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 521

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 36/107 (33%), Gaps = 7/107 (6%)

Query: 12  ERKITEFQAIDPSNIRM---YVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
                  +   P    +   YV   PT     HIG+AR  I  D L R+ +Y        
Sbjct: 83  TCTKDFLKPYAPKKETILLEYVSANPT--GPLHIGHARGAIFGDSLSRIGKYLGYSIATE 140

Query: 68  YVRNITDI-DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
           Y  N   +  + + +        + + ++  +       +++ +  +
Sbjct: 141 YYINDAGVQIENLGKSIYFAGRHLFLGESYELPEGCYKGEYILELAK 187


>gi|206969837|ref|ZP_03230791.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218233729|ref|YP_002369265.1| valyl-tRNA synthetase [Bacillus cereus B4264]
 gi|229071967|ref|ZP_04205177.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
 gi|206735525|gb|EDZ52693.1| valyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218161686|gb|ACK61678.1| valine--tRNA ligase [Bacillus cereus B4264]
 gi|228711126|gb|EEL63091.1| Valyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 881

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|197117146|ref|YP_002137573.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
 gi|238690875|sp|B5EE39|SYL_GEOBB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|197086506|gb|ACH37777.1| leucyl-tRNA synthetase [Geobacter bemidjiensis Bem]
          Length = 824

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 70/166 (42%), Gaps = 22/166 (13%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E  +N+ +  G +  +G KMSKS GN +  N L+E        + A   RL  +      
Sbjct: 564 EPFSNL-LTQGMVIKDGAKMSKSKGNVVDPNALIER-------YGADTARLFSLFAAPPE 615

Query: 318 EPIDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSALYNDLNTVSAIQALHK 370
           + +D++ Q +  +   L++  +            G ++P  L A    L      +A+HK
Sbjct: 616 KDLDWSDQGVDGSYRFLNRVWRLVYDVLPVIGDAGAVNPGELGAEAKKLR-----RAVHK 670

Query: 371 LARESTKNHDLLPIFN-ASAHILGIEVCKEHLNKNISIAIEKLVQE 415
             ++ +++ +    FN A A ++ +    +  +   +     +V+E
Sbjct: 671 TIKKVSEDVEERFHFNTAIAAVMELVNAIQAFSAKDAPENVAVVRE 716


>gi|30022546|ref|NP_834177.1| valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229048175|ref|ZP_04193744.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111929|ref|ZP_04241473.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|296504949|ref|YP_003666649.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433513|sp|Q817R6|SYV_BACCR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|29898104|gb|AAP11378.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228671493|gb|EEL26793.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723162|gb|EEL74538.1| Valyl-tRNA synthetase [Bacillus cereus AH676]
 gi|296326001|gb|ADH08929.1| valyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 881

 Score = 44.5 bits (104), Expect = 0.039,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|254689226|ref|ZP_05152480.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|256257476|ref|ZP_05463012.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260754731|ref|ZP_05867079.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260883752|ref|ZP_05895366.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297248320|ref|ZP_06932038.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|260674839|gb|EEX61660.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260873280|gb|EEX80349.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|297175489|gb|EFH34836.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 515

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRD 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|228902401|ref|ZP_04066555.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228857145|gb|EEN01651.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 921

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|99035994|ref|ZP_01315036.1| hypothetical protein Wendoof_01000128 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 864

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 16/135 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PT+    HIG+       D + R  R     K V Y     D       + ++  +   +
Sbjct: 42  PTISGKLHIGHIFSYCHTDFIARFQRMLG--KDVFYPIGFDDNGLPTERLVEQTYKTRAK 99

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC-----LAPTHQPRATNHIPQMIYLIQNII 140
           E       +    +  K+ Q+F +    +       L      + T  + QM   I  + 
Sbjct: 100 EVGREKFIEMCHEVIEKSKQEFKELFKSVGISYDWDLEYHTISKETVTLSQM-SFID-LY 157

Query: 141 LHGHAYEANNEIIFD 155
             G+AY     I++D
Sbjct: 158 NKGYAYRKMQPILWD 172


>gi|50732866|ref|XP_418801.1| PREDICTED: similar to KIAA0028 [Gallus gallus]
          Length = 911

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 56/186 (30%), Gaps = 27/186 (14%)

Query: 13  RKITEFQAI---DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           R   +F  I   D S  + YV     Y     H+G+ R   + D + R  +         
Sbjct: 73  RIKEQFCRISETDKSRPKFYVLSMFPYPSGKLHMGHVRVYTISDTVARFQKMRG-----M 127

Query: 68  YVRNITDID--DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            V N    D      E A  EH   P        T  N Q   +    L  L+ T +   
Sbjct: 128 QVLNPMGWDAFGLPAENAAIEHGLHPA-----SWTQSNIQHMREQFDALG-LSFTWEREI 181

Query: 126 TNHIPQMIYLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
           T  +P+     Q     +   G  Y+    +              +  ++D+     R  
Sbjct: 182 TTCLPEYYKWTQYLFLKLFESGMVYQKEALVNWDPVDQT----VLANEQVDDNGCSWRSG 237

Query: 181 EKYHKK 186
            K  +K
Sbjct: 238 AKVEQK 243


>gi|62289919|ref|YP_221712.1| methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82699846|ref|YP_414420.1| methionyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189024161|ref|YP_001934929.1| methionyl-tRNA synthetase [Brucella abortus S19]
 gi|254697361|ref|ZP_05159189.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254730259|ref|ZP_05188837.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260545332|ref|ZP_05821073.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260757954|ref|ZP_05870302.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260761777|ref|ZP_05874120.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|62196051|gb|AAX74351.1| MetG, methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82615947|emb|CAJ10970.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Methionyl-tRNA synthetase, class Ia [Brucella
           melitensis biovar Abortus 2308]
 gi|189019733|gb|ACD72455.1| methionine--tRNA ligase [Brucella abortus S19]
 gi|260096739|gb|EEW80614.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
 gi|260668272|gb|EEX55212.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260672209|gb|EEX59030.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
          Length = 515

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRD 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 71  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 287 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 338

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 339 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 398

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 399 ARKAM-DDQALHLALGAIFAVVAEANR 424


>gi|15807168|ref|NP_295897.1| leucyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|6459971|gb|AAF11720.1|AE002050_6 leucyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 874

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 62/254 (24%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H       +          + E  A +      L  +G KMSKS G
Sbjct: 588 PVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMVLGEDGEKMSKSRG 647

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAEILLSKW-- 337
           N +  ++L+       R + A  +R  ++      P +    +  Q +      LS+   
Sbjct: 648 NVVDPDDLV-------REYGADTVRAFLMFI---APWELGGPWDPQGINGPSKWLSRVWN 697

Query: 338 ---------PQTSTSKGIIDPAVLSAL---YND-----LNTVSAIQALHKLARESTKNHD 380
                    P+       +  AV SAL    +D      NT+  I  L +L     K   
Sbjct: 698 VFFEEKVSGPEEKMQGADVRFAVHSALKKVNDDFERMSFNTI--ISTLMELTNALVKA-- 753

Query: 381 LLPIFNASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMK------KFSSADY- 430
                   + + G  V +E L   N+ ++  +  + +E       K      ++   D  
Sbjct: 754 ------KRSPVFGTPVWEEALDIFNRMLAPVVPHIAEEIWHERGQKGSVHTAQWPQVDEA 807

Query: 431 --IRKQLESKGFIL 442
             +R  +   G  +
Sbjct: 808 AAVRDTVT-IGVQV 820


>gi|297530697|ref|YP_003671972.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
 gi|297253949|gb|ADI27395.1| isoleucyl-tRNA synthetase [Geobacillus sp. C56-T3]
          Length = 924

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 36/189 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++E        + A ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVME-------QFGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDP-----------AVLSALY 356
               Y+  +  +   L +   +  K   T      +    DP            V   + 
Sbjct: 621 ASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPIGELGEVDRYM- 679

Query: 357 NDLNTVSAIQALHKL---ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
                   +  L+KL    +++  ++D   +++   H   +E+   +L+    I   +  
Sbjct: 680 --------LAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAA 731

Query: 414 QERLILLKM 422
             R    + 
Sbjct: 732 DSR--ARRA 738


>gi|296193117|ref|XP_002744369.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 2
           [Callithrix jacchus]
          Length = 1149

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 75/196 (38%), Gaps = 20/196 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A     ++ +K       NG L L   KMSKS 
Sbjct: 637 FWYPVDLRVSGKDLVPNHLTYYLYNHVAMW--PEQSDKWPRAVRANGHLLLNSEKMSKST 694

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ 339
           GNF+T+ + ++        + A  +RLA+      + +   +F         + L  W +
Sbjct: 695 GNFLTLTQAID-------KFSADGMRLALADAG--DTVEDANFVETMADAGILRLYTWVE 745

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                     ++ S   +  N       L+    ++ +N++ + +F  +    G    + 
Sbjct: 746 WVKEMVANWDSLRSGPADTFNDRVFASELNAGIIKTDQNYEKM-MFKEALKT-GFFEFQA 803

Query: 400 HLNKNISIAIEKLVQE 415
             +K   +A+E + +E
Sbjct: 804 AKDKYRELAVEGMHRE 819


>gi|78777769|ref|YP_394084.1| leucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|123768601|sp|Q30Q82|SYL_SULDN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78498309|gb|ABB44849.1| leucyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 822

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  + ++E        + A   RL +L      + +++  
Sbjct: 579 LTQGMVLKDGAKMSKSKGNTVDPDAIIE-------KYGADTARLFILFAAPPTQELEWND 631

Query: 325 QRLTEAEILLSKWPQTSTSK 344
             +  A   + ++ + S + 
Sbjct: 632 NAVEGAFKFIKRFYERSVNA 651


>gi|68543|pir||SYTWMT methionine-tRNA ligase (EC 6.1.1.10) - Thermus aquaticus
 gi|155136|gb|AAA27510.1| transfer RNA-Met synthetase [Thermus thermophilus]
          Length = 616

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R        T+    TD   + + RA Q        +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARWHRLDGYR---TFFLTGTDEHGETVYRAAQ-----AAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +    L   A     R T   H   +  +++ +   G  Y    E 
Sbjct: 66  DPKAFVDRVSGRFKRAWDLLGI-AYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|332202169|gb|EGJ16238.1| leucyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 833

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 43/213 (20%), Positives = 73/213 (34%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIIDPAV----------LSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK       G +D A           + +L    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEILAENNGALDKAYNETVKAVTEQIESL--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--ISLADEK 807


>gi|332524700|ref|ZP_08400899.1| leucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332108008|gb|EGJ09232.1| leucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 874

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + Y C    Y     H+G+ R   + D++ R LR       +          D  
Sbjct: 29  DQSKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGMNVLMPMGW------DAF 82

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ +I    A +  T  N          L  LA           P      Q  
Sbjct: 83  GLPA--ENAAIDNGVAPAKWTRANIADMKSQMQPLG-LAFDWSREVATCDPGYYKWNQWF 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY+    + +D
Sbjct: 140 FLKMLEKGIAYKKTQVVNWD 159


>gi|323464155|gb|ADX76308.1| leucyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 810

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H             +      E    ++     L     KMSKS G
Sbjct: 529 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTSEPFQKLFNQGMILGEGNEKMSKSKG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++       RS  A  +RL  M M      I ++   L  +   L + W    
Sbjct: 589 NVVNPDDIV-------RSHGADTLRLYEMFMGPLEASIAWSENGLDGSRRFLDRVWRLFV 641

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           T    +   V+       +T +     H+  ++ T++ + L    A + ++
Sbjct: 642 TEDSQLTDKVIEG-----DTPALQTVYHQTVKKVTEDFESLSFNTAISQLM 687


>gi|228941625|ref|ZP_04104172.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228974554|ref|ZP_04135120.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228981149|ref|ZP_04141449.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228778349|gb|EEM26616.1| Valyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228784957|gb|EEM32970.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228817837|gb|EEM63915.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 881

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|228960734|ref|ZP_04122373.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229129750|ref|ZP_04258717.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229147028|ref|ZP_04275388.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229180734|ref|ZP_04308072.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228602712|gb|EEK60195.1| Valyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228636416|gb|EEK92886.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228653666|gb|EEL09537.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228798950|gb|EEM45925.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 867

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|220904888|ref|YP_002480200.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
 gi|219869187|gb|ACL49522.1| leucyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 837

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN +   E++       + + A  +RL  L      
Sbjct: 572 EPFNNL-LTQGMVLKDGGKMSKSKGNVVDPTEMI-------KKYGADTVRLFCLFAAPAE 623

Query: 318 EPIDFTVQRLTEAEILLSK 336
              D++   +  A   +++
Sbjct: 624 RDFDWSDSGIEGASRFINR 642


>gi|149017948|ref|ZP_01834407.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147931512|gb|EDK82490.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 833

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 44/212 (20%), Positives = 72/212 (33%), Gaps = 54/212 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKSVTEQIESLKFNT--AIAQLMVFVNAANK-E 718

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKLVQ 414
           D L +  A   +  I     HL + +                            IE +VQ
Sbjct: 719 DKLYVDYAKGFVQLIAPFAPHLAEELWQTVAATGESISYVTWPTWDESKLVEDEIEIVVQ 778

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  +   K   + D  R++L+     L D K
Sbjct: 779 IKGKVRA-KIMVAKDLSREELQE--IALADEK 807


>gi|161611294|ref|YP_139002.2| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|90108443|sp|Q5M5J8|SYV_STRT2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    S     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      +   N+ IH    + +GRKMSKS GN I   +++E        + A  +R  +
Sbjct: 495 SLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|78777988|ref|YP_394303.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|109895052|sp|Q30PL3|SYR_SULDN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78498528|gb|ABB45068.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 527

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 59/171 (34%), Gaps = 21/171 (12%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-DIDDKIIERARQEHPSIP 91
           PT     HIG+AR  +  D L+RL R+   +    Y  N   +  D +    +       
Sbjct: 110 PT--GPLHIGHARGAVYGDTLFRLARHLGYDITAEYYVNDAGNQIDLLGLSIQLYGRENI 167

Query: 92  INDAISIITSKNTQQF-----VKDTTRLACLAPTHQPR----ATNHIPQMIYLIQNIILH 142
           +++++    S    ++      +   +      + + R    A      ++ +I+  + +
Sbjct: 168 LHESVKYPESYYRGEYLAPLAHEAIKKFGLEILSDESRQKELALWAKDGVMEIIKKDLAN 227

Query: 143 ------GHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                    YE+   +      +    G +  +K D+  + + +      +
Sbjct: 228 TNIFFDTFVYESTLYDDWDRVMAKMGDGIY--KKDDKLFIASSLKGDDDDR 276


>gi|55736545|gb|AAV60187.1| valyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 901

 Score = 44.5 bits (104), Expect = 0.040,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 57/148 (38%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    S     Y      +   G D+IF      I Q
Sbjct: 455 WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 512

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      +   N+ IH    + +GRKMSKS GN I   +++E        + A  +R  +
Sbjct: 513 SLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFL 565

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 566 SNGSAP-GQDVRFSYEKMDASWNFINKI 592


>gi|297543649|ref|YP_003675951.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
 gi|296841424|gb|ADH59940.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 632

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D           +G+L LEG KMSKS GN +   EL
Sbjct: 253 DVHLVGKEIMRFHTIIWPAMLMALDL--PLPKKVFGHGWLILEGGKMSKSKGNVVDPKEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK----- 336
           +         +    +R  +L    +     F+ + L          +   LLS+     
Sbjct: 311 VS-------KYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMI 363

Query: 337 -------WPQTSTSKGIIDPAVLSALY---------NDLNTVSAIQALHKLARESTKNHD 380
                   P+ S  + + D  + +A           + L   +A+  + KL R + K  D
Sbjct: 364 EKYFGGILPKLSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423


>gi|237815420|ref|ZP_04594418.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|237790257|gb|EEP64467.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
          Length = 530

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+++ AR+E            
Sbjct: 34  PHIGHAYELIATDAMARFQRL--NGMDVYFLTGTDEHGIKMLQSARKE------GITPRD 85

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +NT  F +    L         R +   H      + Q ++ +G  Y+      +  
Sbjct: 86  LADRNTSAFRRMAEVLNSSNDD-YIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWYSV 144

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 145 RDEAYYGE 152



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 54/147 (36%), Gaps = 41/147 (27%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            ++ H GFL   G KMSKS GN I   EL+E        +    +R  ++          
Sbjct: 302 RVFAH-GFLFNRGEKMSKSVGNVIDPFELVER-------YGLDQLRYFLMREVPFGQDGS 353

Query: 316 YREP--IDFTVQRLTE-----AEILLS--------KWPQ----TSTSKGIIDPA------ 350
           Y     ++ T   L       A+  LS        K PQ    +   K I+D A      
Sbjct: 354 YSHEAIVNRTNADLANDLGNLAQRSLSMIAKNCEGKVPQPGAFSEADKAILDQADAALET 413

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
              A+ +D     A+ A+  +  E+ +
Sbjct: 414 ARKAM-DDQALHLALGAIFAVVAEANR 439


>gi|229071395|ref|ZP_04204617.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
 gi|228711686|gb|EEL63639.1| Isoleucyl-tRNA synthetase [Bacillus cereus F65185]
          Length = 913

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|221057882|ref|XP_002261449.1| leucyl-trna synthetase, cytoplasmic [Plasmodium knowlesi strain H]
 gi|194247454|emb|CAQ40854.1| leucyl-trna synthetase, cytoplasmic, putative [Plasmodium knowlesi
           strain H]
          Length = 1295

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 34/108 (31%), Gaps = 38/108 (35%)

Query: 230 VFDIHGGGLDLIFPHHE------------------------------------NEIAQSC 253
            FD+   G DLIF H                                      NEI Q  
Sbjct: 817 PFDVRISGKDLIFNHLTMALFNHVAIWGDKIYNNKQKETNDEKSILERQGEILNEIDQLD 876

Query: 254 --CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
                 I+     +  NG + +   KMSKS GNFIT+ E +      G
Sbjct: 877 LDAHKTIKYFPKSFFCNGHVLVNKEKMSKSKGNFITLKESINQYTSDG 924


>gi|169827027|ref|YP_001697185.1| isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
 gi|168991515|gb|ACA39055.1| Isoleucyl-tRNA synthetase 1 [Lysinibacillus sphaericus C3-41]
          Length = 922

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   L+ EGRKMSKS GN I   ++++        + A ++RL +
Sbjct: 568 SVAINGFAPYKGLLTHGFVLDGEGRKMSKSLGNVIIPQKVMD-------QYGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   +  ++  L +   +  K   T
Sbjct: 621 ASVDYTADVRISMDMLKQVSEVYRKIRNT 649


>gi|91081601|ref|XP_975388.1| PREDICTED: similar to leucyl-tRNA synthetase [Tribolium castaneum]
          Length = 1179

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIE--KTANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DL+  H    I   C     E  K       NG L L   KMSKS+GNF+T
Sbjct: 669 PVDVRVSGKDLVQNHLTYFIYNHCAIWPEEEDKWPRGVRANGHLLLNSAKMSKSDGNFLT 728

Query: 288 INELLETKKFGG 299
           ++E +E     G
Sbjct: 729 LSEAVEKFSADG 740


>gi|288904741|ref|YP_003429962.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731466|emb|CBI13020.1| valyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 883

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|262374478|ref|ZP_06067752.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310474|gb|EEY91564.1| isoleucyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 945

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN IT  ++++     G       +R  +    YR  +    + 
Sbjct: 604 HGFVVDEKGRKMSKSLGNIITPQDIIKDMGADG-------LRFWIASADYRYEMTAGKEI 656

Query: 327 LTEAEILLSKWPQT 340
            + A     +   T
Sbjct: 657 FSRASDGYRRIRNT 670


>gi|302873184|ref|YP_003841817.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|307688651|ref|ZP_07631097.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
 gi|302576041|gb|ADL50053.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
          Length = 643

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 64/182 (35%), Gaps = 44/182 (24%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H          A   E    ++ H G+L ++G KMSKS GN +     
Sbjct: 256 DVHLVGKDIIRFHTIY-WPIFLMALGQELPKQVFGH-GWLLVDGGKMSKSKGNVV----- 308

Query: 292 LETKKFGGRSWPAPVIRLAMLMTH---YREPIDFTVQ---------RLTEAEILLSK--- 336
                     +    +R  +L  H   +    +F  +            +   LLS+   
Sbjct: 309 --DPVVLVNHFGTDAVRYYLL--HEIPFGSDGNFNSEIFIKKVNSDLANDLGNLLSRTTA 364

Query: 337 --------WPQTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARESTKN 378
                     Q  T K  ID  +++ AL          N+LN   A+  +  L R + K 
Sbjct: 365 MVIKYFDGVIQPPTDKEDIDNELINIALDMPKKVEAAINELNLPQALDEIWTLIRRANKY 424

Query: 379 HD 380
            D
Sbjct: 425 ID 426


>gi|228960113|ref|ZP_04121777.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228799629|gb|EEM46582.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 913

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|228954172|ref|ZP_04116200.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|229081148|ref|ZP_04213658.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228702192|gb|EEL54668.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228805492|gb|EEM52083.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 921

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|229180171|ref|ZP_04307515.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
 gi|228603380|gb|EEK60857.1| Isoleucyl-tRNA synthetase [Bacillus cereus 172560W]
          Length = 921

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|228954741|ref|ZP_04116763.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229192669|ref|ZP_04319628.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228590759|gb|EEK48619.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 10876]
 gi|228804939|gb|EEM51536.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 867

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|75763516|ref|ZP_00743228.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488998|gb|EAO52502.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 803

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 570 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 623 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 673

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 674 LREVDRYMLVKLNDLITKVKEA 695


>gi|228909722|ref|ZP_04073545.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228850011|gb|EEM94842.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 913

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 560 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 612

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 613 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 663

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 664 LREVDRYMLVKLNDLITKVKEA 685


>gi|229081723|ref|ZP_04214216.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228701568|gb|EEL54061.1| Valyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 867

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|225870967|ref|YP_002746914.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225700371|emb|CAW94709.1| valyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 883

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 58/148 (39%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    S     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVDSEDFQRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      +  +N+ IH    + EGRKMSKS GN I   +++E        + A  +R  +
Sbjct: 495 SLEFTGRKPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-------KYGADSLRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|254458347|ref|ZP_05071773.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085183|gb|EDZ62469.1| leucyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 816

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 37/143 (25%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  + ++E        + A   RL +L      + +++  
Sbjct: 573 LTQGMVLKDGAKMSKSKGNTVDPDAIIE-------KYGADTARLFILFAAPPTQELEWND 625

Query: 325 QRLTEAEILLSKWPQTSTS------KGIIDPA------------VLSAL--YND------ 358
             +  A   + ++   S++      K IID A            V  AL   ND      
Sbjct: 626 NAVEGAYKFIKRFFDRSSNIVKTDTKPIIDHATLSKDEKYARKKVYEALVRANDVYNEKY 685

Query: 359 -LNTVSA--IQALHKLARESTKN 378
             NT+ A  ++A++ L  +S  +
Sbjct: 686 TFNTLIAGTMEAMNALNAQSNSD 708


>gi|254229863|ref|ZP_04923268.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262393754|ref|YP_003285608.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|151937632|gb|EDN56485.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
 gi|262337348|gb|ACY51143.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
          Length = 691

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  LE
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLE 353

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 354 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 398

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++          ++    + +  +L         I  I    + 
Sbjct: 399 SRNAGFITKRFEGKLSDNFAEPELY---NEFVAAADRIAELYETREFGRAIREITALADK 455

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 456 ANQYVDE 462


>gi|30021984|ref|NP_833615.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206971359|ref|ZP_03232310.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218232297|ref|YP_002368695.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|228940984|ref|ZP_04103542.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228973915|ref|ZP_04134490.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980504|ref|ZP_04140814.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|229047580|ref|ZP_04193170.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|229111365|ref|ZP_04240918.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|229129173|ref|ZP_04258146.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|229146467|ref|ZP_04274838.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|229152093|ref|ZP_04280288.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|296504390|ref|YP_003666090.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|81433828|sp|Q819R4|SYI1_BACCR RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|254782365|sp|B7H6N1|SYI_BACC4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29897540|gb|AAP10816.1| Isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|206734131|gb|EDZ51302.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|218160254|gb|ACK60246.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
 gi|228631442|gb|EEK88076.1| Isoleucyl-tRNA synthetase [Bacillus cereus m1550]
 gi|228637100|gb|EEK93559.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228654410|gb|EEL10275.1| Isoleucyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|228672141|gb|EEL27432.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228723827|gb|EEL75182.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228779324|gb|EEM27581.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228785781|gb|EEM33785.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228818663|gb|EEM64730.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|296325442|gb|ADH08370.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|326941665|gb|AEA17561.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 921

 Score = 44.5 bits (104), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|314936146|ref|ZP_07843493.1| leucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654765|gb|EFS18510.1| leucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 804

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 57/178 (32%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYSRFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYN---------------DLNTVS---AIQALHKLARESTKNHDL 381
              G +   ++    N               D +T++   AI  L     +  K +++
Sbjct: 636 NEDGSLSNKIVENNDNSLDKVYNQTVKKVTEDFDTLNFNTAISQLMVFINDCYKANNI 693


>gi|291567306|dbj|BAI89578.1| (p)ppGpp 3-pyrophosphohydrolase [Arthrospira platensis NIES-39]
          Length = 764

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 13/131 (9%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              +F+     +AE     +   +    +I   +   L+N + T+  +      +++ + 
Sbjct: 126 SKFNFSNTTERQAENFRRMFLAMAQDIRVIVVKLADRLHN-MRTLEFMSE----SKQRSI 180

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNK--------NISIAIEKLVQERLILLKMKKFSSAD 429
             +   IF   A+ LGI   K  L               I+  V +R  + + K  + AD
Sbjct: 181 ALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEAYREIQIRVADRRAIREEKLAALAD 240

Query: 430 YIRKQLESKGF 440
            +R ++E  G 
Sbjct: 241 ILRDRMEKSGI 251


>gi|294670517|ref|ZP_06735397.1| hypothetical protein NEIELOOT_02239 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291307796|gb|EFE49039.1| hypothetical protein NEIELOOT_02239 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 557

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 15/108 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++  GRKMSKS GN +   E+          + A ++RL   
Sbjct: 437 CATLGRAPYKQLLTHGFVVDQNGRKMSKSLGNVVAPQEV-------YNEFGADILRLWTA 489

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            T Y   +  + + L        +   T           L A  +D N
Sbjct: 490 ATDYSGELAISKEILKRVTESYRRLRNTLR--------FLLANLSDFN 529


>gi|270006203|gb|EFA02651.1| hypothetical protein TcasGA2_TC008372 [Tribolium castaneum]
          Length = 1177

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIE--KTANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DL+  H    I   C     E  K       NG L L   KMSKS+GNF+T
Sbjct: 667 PVDVRVSGKDLVQNHLTYFIYNHCAIWPEEEDKWPRGVRANGHLLLNSAKMSKSDGNFLT 726

Query: 288 INELLETKKFGG 299
           ++E +E     G
Sbjct: 727 LSEAVEKFSADG 738


>gi|228923211|ref|ZP_04086501.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228836417|gb|EEM81768.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 881

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E SA    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDSADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|228966849|ref|ZP_04127893.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228792948|gb|EEM40506.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 805

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 50/142 (35%), Gaps = 21/142 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQA 367
               Y+  +  +   L +   +  K   T           L    +D     N   A+  
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFR--------FLLGNLDDFKPSEN-AVAVAE 671

Query: 368 LHKLAR-ESTKNHDLLPIFNAS 388
           L ++ R    K +DL+     +
Sbjct: 672 LREVDRYMLVKLNDLITKVKEA 693


>gi|121606589|ref|YP_983918.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166232820|sp|A1VTL9|SYR_POLNA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120595558|gb|ABM38997.1| arginyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 558

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 57/320 (17%), Positives = 97/320 (30%), Gaps = 65/320 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+ R   + D +  L      +    +  N     I  +      RA+   
Sbjct: 131 PT--GPLHVGHGRQAALGDAICNLHATQGLDVWREFYYNDAGVQIHTLATSTQARAKGLK 188

Query: 88  PSIPINDAISIITSKNTQQFVKD-TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           P    N               +D   +    +   +  A+  +  M   I+       AY
Sbjct: 189 PG-DANWPEPAYNGDYIDDIARDFLAKKTVKSDDREFTASGDVEDM-EAIRQFA---VAY 243

Query: 147 ---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE------KYHKKNPADFILWKRS 197
              E + ++   +    NY   S           RV           K    D  LW RS
Sbjct: 244 LRHEQDLDLKAFSVKFDNYYLESS-----LYSSGRVESTVQRLKDAGKTYEQDGALWLRS 298

Query: 198 TPMEP-------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH--- 245
           T             +  +    P   +H+   A       K  +I   G+D    HH   
Sbjct: 299 TDYGDDKDRVMKKSDGTFTYFVPDVAYHL---AKWERGFTKAVNIQ--GMD----HHGTI 349

Query: 246 ENEIAQSCCADRIEK--TANIWIHNGFLNL----EGRKMSKSNGNFITINELLETKKFGG 299
               A    A+        +  +H   + +    E  K+SK  G+++T+ +L+E      
Sbjct: 350 ARVRAGLQAANAGIPAGYPDYVLHT-MVRVVRHGEEVKISKRAGSYVTLRDLIEWT---- 404

Query: 300 RSWPAPVIRLAMLMTHYREP 319
               A  +R  +L    R+P
Sbjct: 405 ---SADAVRFFLLS---RKP 418


>gi|295698760|ref|YP_003603415.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
 gi|291157378|gb|ADD79823.1| methionyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
          Length = 543

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     +        +   NI++H G L ++G+KMSKS GNFI+ N  L 
Sbjct: 288 HFIGKDIIYFHTLFWPSILEGIKYRKP-NNIFVH-GHLTVDGQKMSKSKGNFISANSYL- 344

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 + + +  +R     
Sbjct: 345 ------KHFDSDYLRYYFAS 358


>gi|325528571|gb|EGD05674.1| leucyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 864

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 42/140 (30%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D +  + Y      Y     H+G+ R   + DV+YR LR       +          D  
Sbjct: 29  DANKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAF 82

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ ++      +  T  N          +  LA           P      Q  
Sbjct: 83  GMPA--ENAAMANGVPPAKWTYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY+    + +D
Sbjct: 140 FLKMLEKGIAYKKTGTVNWD 159


>gi|255327092|ref|ZP_05368168.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
 gi|255296309|gb|EET75650.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
          Length = 514

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 13/131 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R    +     VR +T  D+      + +  +  +  
Sbjct: 15  PNGNPHIGHAYETIAADVLARFKRLDGFD-----VRFMTGTDEH---GQKMQTTAEKLGK 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNE 151
               +  +N+ +F      L         R T+   ++       + +  +G  Y     
Sbjct: 67  TAKELADENSARFKAMNDALNISY-DRFIRTTDPDHYVASQAIW-KRMEENGDIYLDKYA 124

Query: 152 IIFDTSSIPNY 162
             +       Y
Sbjct: 125 GWYSVRDEAYY 135



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    ++ H GFL + G KMSKS GN +    L
Sbjct: 257 DLHLIGKDITRFHSIYWPAFLWSA-GVELPKRVFGH-GFLLVNGEKMSKSVGNVVDPANL 314

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           ++             +R  ++
Sbjct: 315 VDAFGL-------DAVRFFLM 328


>gi|256372693|ref|YP_003110517.1| cysteinyl-tRNA synthetase-like protein [Acidimicrobium ferrooxidans
           DSM 10331]
 gi|256009277|gb|ACU54844.1| cysteinyl-tRNA synthetase-like protein [Acidimicrobium ferrooxidans
           DSM 10331]
          Length = 369

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 25/117 (21%)

Query: 360 NTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCK--EHLNKNISIAIEKLVQER 416
           +T SA  A    A  E+    ++       A ++G++  +    L +      + LV  R
Sbjct: 254 DTASASAAGDLAALDEAIDRGEITDALGQIAALVGVDDDRVVTGLARLARRLTDGLVD-R 312

Query: 417 LILLK---------------MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
              +                 + F+  D++R  L + G I+ED          TRW+
Sbjct: 313 EAAIAPVVEAIIARREAARAARDFALGDHLRDALAAGGVIVEDT------PEGTRWR 363


>gi|124486221|ref|YP_001030837.1| leucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|124363762|gb|ABN07570.1| leucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 932

 Score = 44.5 bits (104), Expect = 0.042,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 17/121 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-----DIDDKIIERA---- 83
           P      H+G+ R  I+ DV+ R  R    +       ++T      I  +I  +     
Sbjct: 40  PYPSGAMHVGHGRTYIIPDVVARFWRMQGKQVLFPMAFHVTGAPVLGIAKRIANKDQKTL 99

Query: 84  -------RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                  R    ++        I +    ++ +   +L  L+   + R T  IPQ    I
Sbjct: 100 KLYGELYRVPKETLANFTDPITIVNYFADEYERVMKQLG-LSIDWRRRFTTIIPQYSKFI 158

Query: 137 Q 137
           +
Sbjct: 159 E 159


>gi|312143436|ref|YP_003994882.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311904087|gb|ADQ14528.1| valyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 884

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 13/129 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I         +  ++I+IH    + +GRKMSKS GN I   E+
Sbjct: 482 DVLVTGRDIIFFWVARMIFMGLKFQDEKPFSDIYIHGLIRDAQGRKMSKSLGNGIDPLEV 541

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R  ++  +   P   + F  +RL  +    +K W  +      +
Sbjct: 542 VD-------KYGADALRFTLITGN--TPGNDMRFREERLEASRNFANKIWNASRFVLMNL 592

Query: 348 DPAVLSALY 356
           +   L AL 
Sbjct: 593 EDFDLEALD 601


>gi|312881896|ref|ZP_07741659.1| isoleucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309370414|gb|EFP97903.1| isoleucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 625

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 7/119 (5%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y G   D++  G D      ++ +  S           +  H   ++  GRKMSKS G
Sbjct: 237 KEYEGNSADLYLEGSDQHRGWFQSSLISSIAMKDEAPYKQVLTHGFVVDGHGRKMSKSIG 296

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 297 NVVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 348


>gi|256378249|ref|YP_003101909.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
 gi|255922552|gb|ACU38063.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
          Length = 645

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 41/136 (30%), Gaps = 11/136 (8%)

Query: 23  PSNIRMYVCGPTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           P    ++   PT     H+G+ A P +  DVL R LR     +   +V    D    +  
Sbjct: 126 PQRALVFCPPPTPNGGLHLGHLAGPYVRADVLVRALRSTG--RDARHVTGTDDHQSHVAV 183

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNI 139
            AR              + + + +  +                AT   H  ++  LI  +
Sbjct: 184 SARLGGA------TPEQVAASHGEAILATLRAAGVDCDRLTRPATAPGHADRIRELITRL 237

Query: 140 ILHGHAYEANNEIIFD 155
                  E   +  + 
Sbjct: 238 AESPSVTEQERDTAYC 253


>gi|241894967|ref|ZP_04782263.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871685|gb|EER75436.1| valyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 888

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W++ + +   W S   W     GW    +     Y     D    G D+IF   
Sbjct: 440 PADAENWEQDSDVLDTWFSSALWPFSTMGWPDTDAEDFKRYF--PTDTLVTGYDIIFFWV 497

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              + QS          N+ IH    + +GRKMSKS GN I   +++E        + A 
Sbjct: 498 ARMMFQSKEFTGRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGAD 550

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
            +R  +       + + F+  ++  A   ++K    S         VL  L +D
Sbjct: 551 ALRWFLATGSTPGQDVRFSYTKMDSAWNFINKIWNASRY-------VLMNLSDD 597


>gi|218191678|gb|EEC74105.1| hypothetical protein OsI_09155 [Oryza sativa Indica Group]
          Length = 1058

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 220 SAMSSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           +A+ +   G  F  DI+  G D      ++ +  S         +++  H   L+ +G K
Sbjct: 632 AAVLAKRDGLNFPADIYLEGSDQHRGWFQSSLLTSIATTGKAPYSSVITHGFVLDEKGFK 691

Query: 278 MSKSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           MSKS GN +   +++   K   +   + A V+RL +    Y   +    Q L +   +  
Sbjct: 692 MSKSLGNVVDPEKVIVGGKNSKQEPGYGADVLRLWVSSVDYTGDVLVGPQILRQMSDMYR 751

Query: 336 KWPQT 340
           K   T
Sbjct: 752 KLRGT 756


>gi|254488853|ref|ZP_05102058.1| isoleucyl-tRNA synthetase [Roseobacter sp. GAI101]
 gi|214045722|gb|EEB86360.1| isoleucyl-tRNA synthetase [Roseobacter sp. GAI101]
          Length = 971

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 56/184 (30%), Gaps = 26/184 (14%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 625 QSVGTTGHAPYRNVVTHGFTLDEKGMKMSKSIGNTIVPEKIV-------QQYGADILRLW 677

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSA-- 364
           +  T Y        + L        +   T      +    + +  +A  +         
Sbjct: 678 VAQTDYTADQRIGPEILKGVADSYRRLRNTMRYMLGALSDFEESDRTAPAD---MPELER 734

Query: 365 -----IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI---EKLVQER 416
                +  L    R+     D   +F A      +++   + +          + L   R
Sbjct: 735 WVLHRVAELDAQVRDGYAKFDFQGVFQAVFTFATVDLSAFYFDVRKDALYCDGDTL--RR 792

Query: 417 LILL 420
               
Sbjct: 793 RAAR 796


>gi|255936271|ref|XP_002559162.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583782|emb|CAP91800.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 570

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/154 (16%), Positives = 48/154 (31%), Gaps = 13/154 (8%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R+         +    YV  P  Y     H+G+   M++ D++ R              +
Sbjct: 38  RRGVATTPQRSNKP-YYVTTPIFYVNAAPHVGHLYTMVIADIMKRWQVLLGNTD----AQ 92

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--H 128
            +T  D+      + +  +I            N + F             H  R T+  H
Sbjct: 93  LLTGTDEH---GMKIQQAAIQAGMDTQAFCDMNCRTFEALAKAANIDN-DHFIRTTDPAH 148

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNY 162
              + Y  + +   G+ Y + +E  +  S    Y
Sbjct: 149 RDAVQYFWEMLQHRGYIYTSRHEGWYSVSDETFY 182


>gi|168484637|ref|ZP_02709589.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172042170|gb|EDT50216.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 833

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNATNKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|104783754|ref|YP_610252.1| leucyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123079078|sp|Q1I4G7|SYL_PSEE4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|95112741|emb|CAK17469.1| leucyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 868

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 21/152 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++E        + A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQSMIE-------QYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +  Q   ++G+     ++AL ++   +   +A+H   ++++ +      FN A
Sbjct: 676 RFLRRVWRLAQAHVAQGLPGQLDIAALSDEQKVIR--RAIHAAIKQASTDVGQFHKFNTA 733

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            A ++ +    E   + ++     L+QE L  
Sbjct: 734 IAQVMTVMNVLEKAPQ-VTAQDRALLQEGLEA 764



 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 37/143 (25%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
               P     Y      Y     H+G+ R   + DV+ R  R     K V          
Sbjct: 26  VTEQPGKETYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N A +  T +N          L  LA       T   P      
Sbjct: 84  MPAENAA------MKNNVAPAKWTYENIDYMKTQLKSLG-LAIDWSREVTTCKPDYYRWE 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     +   G  Y  N  + +D
Sbjct: 137 QWLFTRLFEKGVIYRKNGTVNWD 159


>gi|229199184|ref|ZP_04325865.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228584290|gb|EEK42427.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 544

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + I  +   ++  
Sbjct: 60  QE------GVTAKEIADQYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETIQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|261856811|ref|YP_003264094.1| isoleucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261837280|gb|ACX97047.1| isoleucyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 985

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     +  H   ++ +GRKMSKS GN +   ++++          A V+RL +  
Sbjct: 623 ALKGAAPYRGVLTHGFTVDAQGRKMSKSLGNVVAPQKVIDKMG-------ADVLRLWVAS 675

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T +   +  + + L  A     +   T+ 
Sbjct: 676 TDFSGEMTVSDEILQRAGDAYRRIRNTAR 704


>gi|195953045|ref|YP_002121335.1| glutamyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|229470619|sp|B4U896|SYE_HYDS0 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|195932657|gb|ACG57357.1| glutamyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 464

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 35/114 (30%), Gaps = 27/114 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P+   + H+GNAR  I   +  R           T+V  I D D     R R        
Sbjct: 8   PSPTGYMHLGNARTGIFSYLFARH-------HNGTFVLRIEDTD-----RERS------- 48

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                  T +     ++D   L         R +          + +I  GHAY
Sbjct: 49  -------TKEFEDSIIEDLKWLGIEWDEFY-RQSERFDIYKEYAKKLIDSGHAY 94


>gi|302871850|ref|YP_003840486.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302574709|gb|ADL42500.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  ++++        + A ++RL  
Sbjct: 576 AVATKGRAPYKIVLTHGFVVDGEGKKMSKSEGNVISPFDIID-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  +   + +   +  K   T+ 
Sbjct: 629 VSADYTTDMRISKDIIKQLTEIYRKIRNTAR 659


>gi|242242475|ref|ZP_04796920.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242234049|gb|EES36361.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 916

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 38/127 (29%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMKGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL        P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFINPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKQTSDVYRKIRNT 651


>gi|261419333|ref|YP_003253015.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|319766149|ref|YP_004131650.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
 gi|261375790|gb|ACX78533.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC61]
 gi|317111015|gb|ADU93507.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y412MC52]
          Length = 924

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 36/189 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++E        + A ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVME-------QFGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDP-----------AVLSALY 356
               Y+  +  +   L +   +  K   T      +    DP            V   + 
Sbjct: 621 ASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPIGELGEVDRYM- 679

Query: 357 NDLNTVSAIQALHKL---ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
                   +  L+KL    +++  ++D   +++   H   +E+   +L+    I   +  
Sbjct: 680 --------LAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAA 731

Query: 414 QERLILLKM 422
             R    + 
Sbjct: 732 DSR--ARRA 738


>gi|254522438|ref|ZP_05134493.1| isoleucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720029|gb|EED38554.1| isoleucyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
            +++   GK  D++  G D      ++ +      D+         H   ++  GRKMSK
Sbjct: 562 VLAARGFGKPADLYLEGSDQHRGWFQSSLLTGVAIDKRAPYKQCLTHGFTVDEHGRKMSK 621

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S GN I   +++           A ++RL +    Y   +  + + L        +   T
Sbjct: 622 SLGNGIEPQDIMNKLG-------ADILRLWIASADYSNEMSLSQEILKRNADAYRRLRNT 674

Query: 341 ST 342
           + 
Sbjct: 675 AR 676


>gi|171920261|ref|ZP_02691263.2| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
 gi|171902665|gb|EDT48954.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC 27813]
          Length = 874

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THY 316
            +   ++ IH    + +GRKMSKS GN I   ++++        +    +RL     T  
Sbjct: 504 KKPFKDVLIHGLIRDSQGRKMSKSLGNGIDPFDIID-------KYGLDAMRLFFASCTTI 556

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA----------IQ 366
            E ++F+ +RL      L+K    +     +D      + ++LN              + 
Sbjct: 557 GEDLNFSTERLGANWNYLNKIWNIAKYIENLDE-----INDNLNFEDVDKFCDVNKWILT 611

Query: 367 ALHKLARESTKNHDLLPIFNA 387
            L KL  E  KN D   +  A
Sbjct: 612 ELSKLTLEINKNMDKYNLVVA 632


>gi|78212910|ref|YP_381689.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|123743315|sp|Q3AJU8|SYL_SYNSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78197369|gb|ABB35134.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 8/96 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R       V +              A      I  
Sbjct: 60  PYPSGSLHMGHVRNYVITDVIARVQRMLG--HAVLHPMGWDAFGLPAENAA------IER 111

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           N      T +N  Q      RL       + +AT H
Sbjct: 112 NVDPGEWTDRNIDQMRAQLDRLGLSIDWSREQATCH 147


>gi|33862987|ref|NP_894547.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|48428527|sp|Q7TV01|SYL_PROMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33634904|emb|CAE20890.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Prochlorococcus
           marinus str. MIT 9313]
          Length = 878

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 18/152 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R  ++ DV+ R+ R       V +              A      I  N      
Sbjct: 63  HMGHVRNYVITDVIARVQRMRG--DAVLHPMGWDAFGLPAENAA------IARNVDPGDW 114

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-IF 154
           T +N  Q      RL       + +AT H        Q     +   G AY+    +   
Sbjct: 115 TDQNIAQMRAQLDRLGLSIDWDRQQATCH-QDYYRWTQWLFLELFAGGLAYQKEATVNWD 173

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                      +  ++D +    R      ++
Sbjct: 174 PVDKT----VLANEQVDGEGRSWRSGALVEQR 201


>gi|15606455|ref|NP_213835.1| glutamyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226170|sp|O67271|SYE_AQUAE RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|2983664|gb|AAC07230.1| glutamyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 473

 Score = 44.1 bits (103), Expect = 0.043,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 35/115 (30%), Gaps = 27/115 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P+   + H+GNAR  I   +  R            +V  I D D +  ++          
Sbjct: 10  PSPTGYLHLGNARTAIFSYLFARH-------NNGGFVLRIEDTDPERSKK---------- 52

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                    +  +  ++D   L         R +         +  ++  GHAY 
Sbjct: 53  ---------EYEEMLIEDLKWLGIDWDEFY-RQSERFDIYREYVNKLLESGHAYP 97


>gi|326692181|ref|ZP_08229186.1| valyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 894

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 53/137 (38%), Gaps = 17/137 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           N+ IH    + EGRKMSKS GN +   +++E  
Sbjct: 495 TGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIE-- 552

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  +       + + FT  ++  A   ++K    S         V+  
Sbjct: 553 -----KYGADALRWFLATGSTPGQDVRFTYDKMDAAWNFINKIWNASRY-------VIMN 600

Query: 355 LYNDLNTVSAIQALHKL 371
           L  D  T S +  L KL
Sbjct: 601 LSED--TPSTLPDLDKL 615


>gi|306832917|ref|ZP_07466049.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424816|gb|EFM27950.1| valine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 883

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|289167262|ref|YP_003445529.1| valyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288906827|emb|CBJ21661.1| valyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 883

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 12/126 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW    SA    Y      +   G D+IF      I QS      +   N+ IH    + 
Sbjct: 459 GWPDVDSADFKRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 517 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 568

Query: 332 ILLSKW 337
             ++K 
Sbjct: 569 NFINKI 574


>gi|241767285|ref|ZP_04765017.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241362031|gb|EER58179.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 897

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 43/143 (30%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y C    Y     H+G+ R   + D+L R LR       +          
Sbjct: 26  VTEDTNKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHNVLMPMGW------ 79

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D     A  E+ ++      +  T +N     K    +  LA           P      
Sbjct: 80  DAFGLPA--ENAALKNGVPPAKWTYENIAYMKKQMQAMG-LAIDWSREVATCDPTYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLEKGIAYRKTQVVNWD 159


>gi|258514376|ref|YP_003190598.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257778081|gb|ACV61975.1| isoleucyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 927

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   +++       +   A ++RL +
Sbjct: 573 SVAVTGRAPYRAVLTHGFLVDEKGRKMSKSLGNVVDPLKVI-------QQLGADILRLWV 625

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +      K   T
Sbjct: 626 SSADYKSDLAVSQNILKQLSEAYRKIRNT 654


>gi|94266584|ref|ZP_01290267.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93452779|gb|EAT03314.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 9/98 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  NEL+E        + A  +RL  +      
Sbjct: 568 EPFTNL-LTQGMVIKDGAKMSKSKGNVVDPNELIE-------QYGADTVRLFSLFAAPPE 619

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
             +++  Q +  A   LS+  +       +  A    L
Sbjct: 620 RDLEWNHQGVEGAFRFLSRIHRFVLDNREMLCAADEEL 657



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 15/137 (10%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +P   + YV    P      H+G+ R   + DV+ R  R       V +           
Sbjct: 32  EPGRAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCG--DNVVHPMGWDAFGMPA 89

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYL 135
              A +           +  T +N         RL       +  AT     +  + ++ 
Sbjct: 90  ENAAIKHGTH------PAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFF 143

Query: 136 IQNIILHGHAYEANNEI 152
           +  ++  G AY     +
Sbjct: 144 L-KMLKKGLAYRKLTTV 159


>gi|116671079|ref|YP_832012.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|116611188|gb|ABK03912.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 519

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +        +T  D+  ++ A+              
Sbjct: 22  PHIGHAYEYIATDAMARFKRLDGYDVFF-----LTGTDEHGMKIAQTADK---EGITPKE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N + +      L         R T  +H      + + +  +G  Y +  E  +  
Sbjct: 74  LVDRNAEIYKAAHAALGISY-DRFIRTTDEDHYAASQAIWKKMEANGDIYLSKYEGWYSV 132

Query: 157 SSIPNY 162
                Y
Sbjct: 133 RDEAYY 138



 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 59/178 (33%), Gaps = 30/178 (16%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    I IH GFLN  G KMSKS GN +  ++ 
Sbjct: 262 DVHVIGKDISRFHAIYWPAFLMSA-GLELPKRIMIH-GFLNNNGVKMSKSLGNVVAPSDF 319

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THY---------REPIDFTVQRLTEAEILLS 335
           +         +    +R   L          Y            +      L  A+  LS
Sbjct: 320 VA-------QYGLDQVRFFFLREVPFGADGSYSHEAIVGRMNSDLANNFGNL--AQRSLS 370

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
              +    +  +  A  +     L   +    L + AR + +  +      A   +LG
Sbjct: 371 MVAKNCEGRVPVPGAFTAEDSALLEQANG---LLEAARAAFEKQEFSRALEAIWGVLG 425


>gi|325977658|ref|YP_004287374.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177586|emb|CBZ47630.1| valyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 883

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|320546286|ref|ZP_08040606.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320449063|gb|EFW89786.1| valine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 883

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|312135165|ref|YP_004002503.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311775216|gb|ADQ04703.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  ++++        + A ++RL  
Sbjct: 576 AVATKGRAPYKIVLTHGFVVDGEGKKMSKSEGNVISPFDIID-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  +   + +   +  K   T+ 
Sbjct: 629 VSADYTTDMRISKDIIKQLTEIYRKIRNTAR 659


>gi|306830739|ref|ZP_07463903.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304427086|gb|EFM30194.1| valine--tRNA ligase [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 883

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  A   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|291614548|ref|YP_003524705.1| isoleucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
 gi|291584660|gb|ADE12318.1| isoleucyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
          Length = 962

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 12/107 (11%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +G KMSKS GN I   ++            A ++RL + 
Sbjct: 614 CAIDGRAPYRQLLTHGFTVDEKGYKMSKSKGNGIEPQDICNKLG-------ADILRLWIA 666

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSAL 355
            T Y   +  + + L        +   T      +    D A   A+
Sbjct: 667 STDYSGEMSLSEEILKRVTDGYRRIRNTLRFLLANIADFDMA-RDAM 712


>gi|149001632|ref|ZP_01826605.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|237649676|ref|ZP_04523928.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821376|ref|ZP_04597221.1| leucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|147760090|gb|EDK67079.1| leucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 833

 Score = 44.1 bits (103), Expect = 0.044,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 73/211 (34%), Gaps = 52/211 (24%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEILAENNGALDKVYNETVKAVTEQIESLKFNT--AIAQLMVFVNATNKED 719

Query: 380 DL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLVQE 415
            L        + +    A  L  E+ +                   +K +   IE +VQ 
Sbjct: 720 KLYVDYAKGFIQLIAPFAPHLAEELWQTVAETGESISYVAWPTWDESKLVEDEIEIVVQI 779

Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           +  +   K   + D  R++L+     L D K
Sbjct: 780 KGKVRA-KLMVAKDLSREELQE--IALADEK 807


>gi|228475879|ref|ZP_04060589.1| leucine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270034|gb|EEK11504.1| leucine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 804

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 57/178 (32%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYSRFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALYN---------------DLNTVS---AIQALHKLARESTKNHDL 381
              G +   ++    N               D +T++   AI  L     +  K +++
Sbjct: 636 NEDGSLSNKIVENNDNSLDKVYNQTVKKVTEDFDTLNFNTAISQLMVFINDCYKANNI 693


>gi|220908415|ref|YP_002483726.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782492|sp|B8HM05|SYL_CYAP4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|219865026|gb|ACL45365.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 858

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 50/174 (28%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D S  + Y      Y     H+G+ R   + DV+ R+ R       V +        
Sbjct: 26  TPTDRSKPKFYALSMFPYPSGNLHMGHVRNYTITDVIARVRRMQGY--RVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T+ N  Q   +  RL      +   AT   P      
Sbjct: 84  LPAENAA------IKRGIHPAKWTADNITQMRSELKRLGLSYDWNCELATCS-PDYYRWT 136

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 137 QWIFLQFYQAGLAYQKEAAVNWDPIDQT---VLANEQVDSEGRSWRSGAKVERK 187


>gi|56419671|ref|YP_146989.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
 gi|81819763|sp|Q5L0V9|SYI_GEOKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56379513|dbj|BAD75421.1| isoleucyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
          Length = 924

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 66/189 (34%), Gaps = 36/189 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++E        + A ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVME-------QFGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDP-----------AVLSALY 356
               Y+  +  +   L +   +  K   T      +    DP            V   + 
Sbjct: 621 ASVDYQADVRISDHILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPIGELGEVDRYM- 679

Query: 357 NDLNTVSAIQALHKL---ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
                   +  L+KL    +++  ++D   +++   H   +E+   +L+    I   +  
Sbjct: 680 --------LAKLNKLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEAA 731

Query: 414 QERLILLKM 422
             R    + 
Sbjct: 732 DSR--ARRA 738


>gi|13357827|ref|NP_078101.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762145|ref|YP_001752350.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|183508747|ref|ZP_02958221.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701957|ref|ZP_02971594.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
 gi|12585354|sp|Q9PQM4|SYV_UREPA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|11271419|pir||E82913 valyl-tRNA synthetase UU267 [imported] - Ureaplasma urealyticum
 gi|6899238|gb|AAF30676.1|AE002123_9 valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827722|gb|ACA32984.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC 27815]
 gi|182675679|gb|EDT87584.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700717|gb|EDU18999.1| valyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC 27818]
          Length = 874

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 23/141 (16%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THY 316
            +   ++ IH    + +GRKMSKS GN I   ++++        +    +RL     T  
Sbjct: 504 KKPFKDVLIHGLIRDSQGRKMSKSLGNGIDPFDIID-------KYGLDAMRLFFASCTTI 556

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA----------IQ 366
            E ++F+ +RL      L+K    +     +D      + ++LN              + 
Sbjct: 557 GEDLNFSTERLGANWNYLNKIWNIAKYIENLDE-----INDNLNFEDVDKFCDVNKWILT 611

Query: 367 ALHKLARESTKNHDLLPIFNA 387
            L KL  E  KN D   +  A
Sbjct: 612 ELSKLTLEINKNMDKYNLVVA 632


>gi|283457812|ref|YP_003362406.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
 gi|283133821|dbj|BAI64586.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
          Length = 514

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 41/131 (31%), Gaps = 13/131 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R    +     VR +T  D+      + +  +  +  
Sbjct: 15  PNGNPHIGHAYETIAADVLARFKRLDGFD-----VRFMTGTDEH---GQKMQTTAEKLGK 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNE 151
               +  +N+ +F      L         R T+   ++       + +  +G  Y     
Sbjct: 67  TAKELADENSARFKAMNDALNISY-DRFIRTTDPDHYVASQAIW-KRMEENGDIYLDKYA 124

Query: 152 IIFDTSSIPNY 162
             +       Y
Sbjct: 125 GWYSVRDEAYY 135



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 56/175 (32%), Gaps = 26/175 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  IE    ++ H GFL + G KMSKS GN +    L
Sbjct: 257 DLHLIGKDITRFHSIYWPAFLWSA-GIELPKRVFGH-GFLLVNGEKMSKSVGNVVDPANL 314

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE-------------AEILLSKW 337
           ++             +R  ++    + +   ++ + +               A+  LS  
Sbjct: 315 VDAFGL-------DAVRFFLMREVSFGQDGSYSEESIINRINSDLANNLGNLAQRSLSMV 367

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
            +              A    L+      AL++  R            +    +L
Sbjct: 368 AKNCGGAVPAHGEFTEADRQILDEA---AALYEPVRADFDEQAFHRALDRIWTVL 419


>gi|226952305|ref|ZP_03822769.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836971|gb|EEH69354.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 945

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN IT  ++++     G       +R  +    YR  +    + 
Sbjct: 604 HGFVVDEKGRKMSKSLGNIITPQDIIKDMGADG-------LRFWIASADYRYEMTAGKEI 656

Query: 327 LTEAEILLSKWPQT 340
            + A     +   T
Sbjct: 657 FSRASDGYRRIRNT 670


>gi|194364903|ref|YP_002027513.1| isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|254782438|sp|B4SP18|SYI_STRM5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|194347707|gb|ACF50830.1| isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
            +++   GK  D++  G D      ++ +      D+         H   ++  GRKMSK
Sbjct: 562 VLAARGFGKPADLYLEGSDQHRGWFQSSLLTGVAIDKRAPYKQCLTHGFTVDEHGRKMSK 621

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S GN I   +++           A ++RL +    Y   +  + + L        +   T
Sbjct: 622 SLGNGIEPQDIMNKLG-------ADILRLWIASADYSNEMSLSQEILKRNADAYRRLRNT 674

Query: 341 ST 342
           + 
Sbjct: 675 AR 676


>gi|117619483|ref|YP_855224.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
 gi|166228633|sp|A0KG39|SYI_AERHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|117560890|gb|ABK37838.1| isoleucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
           ATCC 7966]
          Length = 953

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN ++  +++           A ++RL +  T Y   +  + + 
Sbjct: 608 HGFTVDGQGRKMSKSIGNVVSPQDVMNKLG-------ADILRLWVASTDYTGEMTVSDEI 660

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 661 LKRSADAYRRIRNTAR 676


>gi|94263197|ref|ZP_01287014.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
 gi|93456415|gb|EAT06535.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia [delta
           proteobacterium MLMS-1]
          Length = 829

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 9/98 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  NEL+E        + A  +RL  +      
Sbjct: 568 EPFTNL-LTQGMVIKDGAKMSKSKGNVVDPNELIE-------QYGADTVRLFSLFAAPPE 619

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
             +++  Q +  A   LS+  +       +  A    L
Sbjct: 620 RDLEWNHQGVEGAFRFLSRIHRFVLDNREMLCAADEEL 657



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 15/137 (10%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +P   + YV    P      H+G+ R   + DV+ R  R       V +           
Sbjct: 32  EPGRAKYYVLEMFPYPSGRIHMGHVRNYTIGDVVARYRRMCG--DNVVHPMGWDAFGMPA 89

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYL 135
              A +           +  T +N         RL       +  AT     +  + ++ 
Sbjct: 90  ENAAIKHGTH------PAKWTFENIDYMRGQLQRLGLSYDWDRELATCDPTYYRWEQLFF 143

Query: 136 IQNIILHGHAYEANNEI 152
           +  ++  G AY     +
Sbjct: 144 L-KMLKKGLAYRKLTTV 159


>gi|326383789|ref|ZP_08205474.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
 gi|326197553|gb|EGD54742.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
          Length = 523

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  +E    ++ H GFL   G KMSKS GN +  +EL
Sbjct: 264 DLHIIGKDIIRFHCVYWPAFLMSA-GLEVPRRVFAH-GFLFNRGEKMSKSIGNVVDPHEL 321

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           +E        +    +R   L    Y +   ++   +
Sbjct: 322 VE-------QFGLDAVRYFFLREVSYGQDGSYSADAI 351


>gi|325290557|ref|YP_004266738.1| leucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965958|gb|ADY56737.1| leucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 827

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 9/82 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
              E   N+ +  G + ++G KMSKS GN ++  E++         + A   RL +L   
Sbjct: 562 HVDEPFENL-LTQGMVCMDGSKMSKSKGNVVSPEEIIGR-------FGADTARLFILFAA 613

Query: 315 HYREPIDFTVQRLTEAEILLSK 336
                ++++ Q +      L++
Sbjct: 614 PPERDLEWSEQGVEGCYRFLNR 635


>gi|323451856|gb|EGB07732.1| hypothetical protein AURANDRAFT_64726 [Aureococcus anophagefferens]
          Length = 630

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 26/47 (55%)

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
            A+++L+ ER +L + + F +AD I  QL   G  ++D +     +R
Sbjct: 500 DAVDELLVERALLRQCRDFEAADGIHAQLRRLGVEVDDRRKTWASRR 546



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 9/60 (15%)

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILEDYKNPDNGQRMTRW 457
             L++ +   + +++  R      K +  AD+ R +L  + G I++D        R  RW
Sbjct: 564 AGLDRALLRTVTRILARRSKAQYQKDWVVADHYRDELRVNHGVIVDD--------RTKRW 615


>gi|290987758|ref|XP_002676589.1| predicted protein [Naegleria gruberi]
 gi|284090192|gb|EFC43845.1| predicted protein [Naegleria gruberi]
          Length = 519

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 27/116 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            F HIG+A+  ++         Y+  +     +      DD   ++ R+E          
Sbjct: 14  GFLHIGHAKAALM-------NNYFAKKYNGKLIMRF---DDTNPDKEREE---------- 53

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
                      + D   L    P    R+++H  + I   + +I  G AY  +  +
Sbjct: 54  ------YEHAILSDLESLGVK-PDIHVRSSDHFDKCIEFAEQLIREGKAYMDDTAV 102


>gi|228908321|ref|ZP_04072166.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
 gi|228851362|gb|EEM96171.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
          Length = 517

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 60/372 (16%), Positives = 107/372 (28%), Gaps = 61/372 (16%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    +     P   I D     +       ++F K               
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQH 127

Query: 124 ---RATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGS--FSRR 168
              R+  +   ++           I      G   E         T      G    +  
Sbjct: 128 DEYRSGRYNENILEALYKRKDIYDILMDFKTGECSEEGRESFYPATLYCERCGKDTTTIT 187

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
             DE     R   +   +     +    +  M+  W+  W      W IE          
Sbjct: 188 HFDEVLKTIRYECECGNEKELSVL---NTNKMKLNWKIDWPMR---WMIEDVVFEP---- 237

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFI 286
                  GG D         +++    +   + A  ++   F+ ++G   KMS S+GN I
Sbjct: 238 -------GGRDHSSETGSYNVSKEIAREIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSI 290

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTS 343
           T +ELL       + +   VI        YR    F     + +        +   +  +
Sbjct: 291 TPSELL-------KVYLPEVILFMF--AKYRPNAAFHIGLDEDVIRNYTEYERLKDSYEN 341

Query: 344 KGIIDPAVLSAL 355
           K + +  +L A+
Sbjct: 342 KTLKNEDLLDAI 353


>gi|225018393|ref|ZP_03707585.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
 gi|224948811|gb|EEG30020.1| hypothetical protein CLOSTMETH_02340 [Clostridium methylpentosum
           DSM 5476]
          Length = 928

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 51/138 (36%), Gaps = 13/138 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N+  H   ++ EGRKMSKS  N +   +++         +   ++RL +
Sbjct: 579 AVATKGTAPYKNVCTHGWVVDGEGRKMSKSMQNGVAPEKIIS-------QYGTDILRLWV 631

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--AI 365
             + Y   +  + + L +      K   T+     +    DP       + L+ +   A+
Sbjct: 632 ASSDYHADVRISPEILKQLSEAYRKIRNTARFILGNISDFDPNTDKVDNSSLHEIDKWAL 691

Query: 366 QALHKLARESTKNHDLLP 383
             L  L ++  + ++   
Sbjct: 692 VKLDALIKKVNEAYNAFD 709


>gi|57237946|ref|YP_179194.1| isoleucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81819510|sp|Q5HU41|SYI_CAMJR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57166750|gb|AAW35529.1| isoleucyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058503|gb|ADT72832.1| Isoleucyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 917

 Score = 44.1 bits (103), Expect = 0.045,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 55/150 (36%), Gaps = 30/150 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYLSDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--------------TVSAIQALHKLA 372
           L +      K   T           L A  NDL                  A +   K +
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLKDLEVKEFSFIDKWILSRATKV-FKAS 703

Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +E+   ++    F+   + L  ++   +L+
Sbjct: 704 KEAFFAYEFAKGFSLLLNFLSADLSGIYLD 733


>gi|326803168|ref|YP_004320986.1| leucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650987|gb|AEA01170.1| leucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 804

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 50/146 (34%), Gaps = 31/146 (21%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E        + A  +RL  M M   
Sbjct: 557 EEPFQKLFNQGMILGEGHEKMSKSKGNVVNPDDIVER-------YGADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKG-------IIDPAVLSALYN--------D-- 358
              I ++   L  A   L + W     S+         ID   L  +YN        D  
Sbjct: 610 DASIAWSEDGLAGARRFLERVWRLFVDSEDQLRDRITTIDTGELDKVYNQTVKKVTEDLE 669

Query: 359 ---LNTVSAIQALHKLARESTKNHDL 381
               NT  AI  +     E+ K   +
Sbjct: 670 KLHFNT--AISQMMVFVNEANKAESI 693


>gi|319790219|ref|YP_004151852.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114721|gb|ADU97211.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 526

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 14/120 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A      DV+ R  R+    + V ++    +   KI + A +      +  
Sbjct: 14  VNDKPHLGHAYTTTAADVVARFNRFLG--RDVFFLTGTDEHGQKIQQAAEK------MGM 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
           +      +    F K    L      H  R T+  P+ +  +Q+I +    YE N +I  
Sbjct: 66  SPKEFVDRLVPVFKKLWEVLNISY-DHFIRTTD--PEHVKAVQHIFMK--CYE-NGDIYL 119


>gi|237749364|ref|ZP_04579844.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229380726|gb|EEO30817.1| arginyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 571

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 57/330 (17%), Positives = 110/330 (33%), Gaps = 46/330 (13%)

Query: 9   NTLERKIT--EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           NT   +    EF + +P+       GP      H+G+ R   + D +  L      +   
Sbjct: 120 NTGTGRKVMVEFVSANPT-------GP-----LHVGHGRQGALGDSISALFASQGYDVTR 167

Query: 67  TYVRN-----ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
            +  N     I ++   +  RA+   P        S            D      +A  +
Sbjct: 168 EFYYNDAGVQIDNLTLSVQARAKGLKPGE-EGWPESAYNGDYIADIATDFLAKKTVAARN 226

Query: 122 QPRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGT 177
               T         +++I     AY   E +N++        N+   S    D + K   
Sbjct: 227 CETVTASGDP--DDLKSIREFAVAYLRNEQDNDLNAFGIHFDNFFLESSLYRDGKVKDAV 284

Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR--GRPGWHIECSAMSSHYLGKVFD--I 233
               K  K   ++  LW R+T      +    +  G   + +   A   +   + FD  I
Sbjct: 285 DTLTKEGKTFESEGALWLRTTEYGDDKDRVMRKTDGTYTYFVPDVAYHINKFSRGFDKVI 344

Query: 234 HGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNL--EGR--KMSKSNG 283
           +  G D    HH   +A+     +       +   +  +H   + +  +G   K+SK  G
Sbjct: 345 NIQGSD----HH-GTVARVRAGLQGVNKGIPKAFPDYVLHK-MVTVMKDGAEVKISKRAG 398

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM 313
           +++T+ +L+E    G        +R  ++ 
Sbjct: 399 SYVTVRDLIEWSGAGDVVRGRDAVRFFLIS 428


>gi|312875953|ref|ZP_07735942.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311797151|gb|EFR13491.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  +++         + A ++RL  
Sbjct: 576 AVATKGRAPYKIVLTHGFVVDGEGKKMSKSEGNVISPFDIIN-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  + + + +   +  K   T+ 
Sbjct: 629 VSADYTTDMRISKEIIKQLTEIYRKIRNTAR 659


>gi|260913216|ref|ZP_05919698.1| isoleucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
 gi|260632803|gb|EEX50972.1| isoleucine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
          Length = 932

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   D       +  H   ++ +G KMSKS GN I  +E+            A ++RL +
Sbjct: 578 STATDNKAPYKQVLTHGFTVDEKGYKMSKSLGNVILPSEVWNKNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   I  + + L  A     +   T+     +    DP        DL     +  
Sbjct: 631 ASTDYTGEIAVSHKILNSAGDTYRRIRNTARFLLANLNGFDPKR------DLVKPEEMMV 684

Query: 368 LHKLA 372
           L + A
Sbjct: 685 LDRWA 689


>gi|190573352|ref|YP_001971197.1| isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|254782439|sp|B2FTJ0|SYI_STRMK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|190011274|emb|CAQ44887.1| putative isoleucyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
            +++   GK  D++  G D      ++ +      D+         H   ++  GRKMSK
Sbjct: 562 VLAARGFGKPADLYLEGSDQHRGWFQSSLLTGVAIDKRAPYKQCLTHGFTVDEHGRKMSK 621

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S GN I   +++           A ++RL +    Y   +  + + L        +   T
Sbjct: 622 SLGNGIEPQDIMNKLG-------ADILRLWIASADYSNEMSLSQEILKRNADAYRRLRNT 674

Query: 341 ST 342
           + 
Sbjct: 675 AR 676


>gi|330831173|ref|YP_004394125.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
 gi|328806309|gb|AEB51508.1| Isoleucyl-tRNA synthetase [Aeromonas veronii B565]
          Length = 953

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN ++  +++           A ++RL +  T Y   +  + + 
Sbjct: 608 HGFTVDGQGRKMSKSIGNVVSPQDVMNKLG-------ADILRLWVASTDYTGEMTVSDEI 660

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 661 LKRSADAYRRIRNTAR 676


>gi|284050030|ref|ZP_06380240.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
           [Arthrospira platensis str. Paraca]
          Length = 749

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 49/131 (37%), Gaps = 13/131 (9%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              +F+     +AE     +   +    +I   +   L+N + T+  +      +++ + 
Sbjct: 111 SKFNFSNTTERQAENFRRMFLAMAQDIRVIVVKLADRLHN-MRTLEFMSE----SKQRSI 165

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNK--------NISIAIEKLVQERLILLKMKKFSSAD 429
             +   IF   A+ LGI   K  L               I+  V +R  + + K  + AD
Sbjct: 166 ALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEAYREIQIRVADRRAIREEKLAALAD 225

Query: 430 YIRKQLESKGF 440
            +R ++E  G 
Sbjct: 226 ILRDRMEKSGI 236


>gi|251771721|gb|EES52296.1| methionyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 673

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 11/116 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R     + V ++    +   K+ + A +         
Sbjct: 17  VNDIPHIGHAYTTVAADVLARTHRLLG--EPVFFLTGTDEHGQKVWQSAERHGLP----- 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA 148
              +   +   +F +   +L  ++     R T   H+  +   +  ++  G  YE 
Sbjct: 70  -PQVYVDRILPRFRELWEKL-VISNDDFVRTTQPRHVEGVREALSLLLEKGDIYEG 123



 Score = 40.2 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 13/68 (19%)

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREP 319
            A+ W       ++G+KMSKS GN +    L+ET       +     R  +L    + + 
Sbjct: 290 FAHGWW-----TVDGQKMSKSRGNVVDPVGLVET-------FGPDATRYFLLREGQFGQD 337

Query: 320 IDFTVQRL 327
           +DF+ + L
Sbjct: 338 VDFSREAL 345


>gi|238793464|ref|ZP_04637089.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
 gi|238727237|gb|EEQ18766.1| Methionyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
          Length = 635

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T NI++H G++ + G KMSKS G FI  +  L 
Sbjct: 251 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NIFVH-GYVTVNGAKMSKSRGTFIKASTYL- 307

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 + + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 308 ------QHFDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNTDIVNKVVNLASRNAGF 359

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A      ++      A   I+ + ++   ++++  
Sbjct: 360 INKRFGGKLADKLADPALYKTFTDAAVSIADAYNSRESGKAIREIMALADIANRYVDEQA 419

Query: 406 SIAIEK 411
              I K
Sbjct: 420 PWVIAK 425


>gi|118475143|ref|YP_891906.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166231210|sp|A0RNX3|SYL_CAMFF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118414369|gb|ABK82789.1| leucyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 811

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  ++++         + A   RL +L     ++ +++  
Sbjct: 568 LTQGMVLKDGSKMSKSKGNTVDPDDIIN-------KFGADTARLFILFAAPPQKELEWND 620

Query: 325 QRLTEAEILLSKWPQTSTSK 344
             +  A   +++    S + 
Sbjct: 621 SAVEGAFKFINRLYDRSDNA 640



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 33/122 (27%), Gaps = 17/122 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D L R  R            N+             E+ +I  
Sbjct: 40  PYPSGRLHMGHVRNYSIGDALSRYYRNRGY--------NVLQPIGFDSFGMPAENAAIKH 91

Query: 93  NDAISIITSKNTQQFVKDTTRLAC------LAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                I T  N     K+   L        L  T  P  T    +  + I  +   G  Y
Sbjct: 92  KIHPKIWTYDNIDYMTKELDALGFSFSKKRLFATSDPLYTRW--EQEFFI-RMYEKGLVY 148

Query: 147 EA 148
             
Sbjct: 149 RK 150


>gi|23016353|ref|ZP_00056110.1| COG0060: Isoleucyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 947

 Score = 44.1 bits (103), Expect = 0.046,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 7/103 (6%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN +   E++ +         A ++RL +
Sbjct: 601 SCGTRGRAPYDAVLTHGFVLDEDGRKMSKSLGNVVAPQEVVGSMG-------ADILRLWV 653

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
           + + Y + +    + L     +  +   T             A
Sbjct: 654 VGSDYSDDLRIGPEILKTQVDIYRRLRNTLRYLLGALDGFTEA 696


>gi|327398468|ref|YP_004339337.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
 gi|327181097|gb|AEA33278.1| Isoleucyl-tRNA synthetase [Hippea maritima DSM 10411]
          Length = 930

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 17/119 (14%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN I   +++       + + A ++RL    T YRE +  + + 
Sbjct: 595 HGFVVDSKGRKMSKSLGNVIQPEKII-------KKYGAELLRLWASATDYREDVRLSDEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ--ALHKLARESTKNHDLLP 383
           +        K   T           L    ND +   A++   L ++ +      + L 
Sbjct: 648 MRRLVDNYRKIRNTIR--------FLLGNLNDFDESKALKYDELEEIDKWVLAETEHLK 698


>gi|323704372|ref|ZP_08115951.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323536438|gb|EGB26210.1| valyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 878

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 68/166 (40%), Gaps = 15/166 (9%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I  S    +      + IH    + +GRKMSKS GN I   E+
Sbjct: 479 DVLVTGYDIIFFWVARMIFMSLEFMKEVPFRRVLIHGLVRDSQGRKMSKSLGNGIDPLEI 538

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +E        + A  +R  ++  +   P   + F+  ++  +    +K    S    +  
Sbjct: 539 IE-------KYGADTLRFTLITGN--APGNDMRFSDDKVEASRNFANKLWNASRYVMLNL 589

Query: 349 PAVLSALY-NDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHI 391
            +  + LY  +LN      +  L+ + +E T+N +   +  A+  +
Sbjct: 590 TSDDTTLYLENLNIADKWILTRLNDVVKEVTENLEKYELGIAAGKL 635


>gi|294054444|ref|YP_003548102.1| isoleucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
 gi|293613777|gb|ADE53932.1| isoleucyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
          Length = 944

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 18/172 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  AD+     N+  H   +  +G K+SKS+G    +NE +       + + A +IRL +
Sbjct: 590 SVIADKAAPYKNLLTHGFIVKEDGTKLSKSDGAARPLNEWI-------KGYGADIIRLWI 642

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--AI 365
               YR  +  + + +            T      S    DPA  +    DL+ V   A+
Sbjct: 643 CSQDYRGDVPVSDKIVKNVANNYRNIRNTLRYQIGSLYDFDPAQHTVALEDLHPVDKWAL 702

Query: 366 QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             L +L R  T+ ++      A       E      +  +S     ++++RL
Sbjct: 703 NELAQLVRNVTEAYESYEFHRAFK-----EFIDPFCSNTLSATYHDILKDRL 749


>gi|269967339|ref|ZP_06181400.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
 gi|269828047|gb|EEZ82320.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
          Length = 691

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  LE
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLE 353

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 354 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 398

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++          ++    + +  +L         I  I    + 
Sbjct: 399 SRNAGFIAKRFEGKLSDNFAEPELY---NEFVAAADRIAELYETREFGRAIREITALADK 455

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 456 ANQYVDE 462


>gi|145297754|ref|YP_001140595.1| isoleucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166200195|sp|A4SIX5|SYI_AERS4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|142850526|gb|ABO88847.1| isoleucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 953

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN ++  +++           A ++RL +  T Y   +  + + 
Sbjct: 608 HGFTVDGQGRKMSKSIGNVVSPQDVMNKLG-------ADILRLWVASTDYTGEMTVSDEI 660

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 661 LKRSADAYRRIRNTAR 676


>gi|312127589|ref|YP_003992463.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
 gi|311777608|gb|ADQ07094.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 13/135 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  +++         + A ++RL  
Sbjct: 576 AVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIIN-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--AI 365
           +   Y   +  +   + +   +  K   T+     +    DP      Y +L  +   A+
Sbjct: 629 VSADYTTDMRISKDIIKQLTEIYRKIRNTARFLLGNLYDFDPKTDKVGYENLKEIDKWAL 688

Query: 366 QALHKLARESTKNHD 380
           Q L+KL  + TK ++
Sbjct: 689 QRLYKLIEKVTKAYE 703


>gi|260435959|ref|ZP_05789929.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260413833|gb|EEX07129.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 875

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 30/96 (31%), Gaps = 8/96 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R+ R       V +              A      I  
Sbjct: 60  PYPSGSLHMGHVRNYVITDVIARVQRMRG--HAVLHPMGWDAFGLPAENAA------IER 111

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           N      T +N  Q      RL       + +AT H
Sbjct: 112 NVDPGEWTDRNIDQMRAQLDRLGLSIDWSREQATCH 147


>gi|82703767|ref|YP_413333.1| isoleucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|82411832|gb|ABB75941.1| Isoleucyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  G KMSKS GN I   ++++T         A ++RL + 
Sbjct: 595 CAIDGRAPYDALLTHGFVVDGHGHKMSKSRGNVIAPQKVMDTSG-------ADILRLWVG 647

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 648 STDYSGELSISDEILKRVVESYRRIRNT 675



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 65/184 (35%), Gaps = 20/184 (10%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERARQE 86
           GP  Y     HIG+A   I+ D++ +       +           +  I+ +I ++  + 
Sbjct: 56  GP-PYANGDIHIGHAVNKILKDIIIKSKTLAGFDAPYVPGWDCHGLP-IEHQIEKKYGKN 113

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHG 143
            P   + +       +   +   D  RL  L     P  T +      +I  +  I  +G
Sbjct: 114 LPGDKVRELCRAFAKEQVARQKADFIRLGVLGDWDNPYLTMNYRTEAGIIRALGKIHENG 173

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILW----KRST 198
           + Y+    + +         + +  +++ E K    +  K+   +PA F  W    K S 
Sbjct: 174 YLYQGQKPVNWCIDCGS---ALAEAEVEYEDKTSPAIDVKFRVADPAAF--WQKVLKPSD 228

Query: 199 PMEP 202
            + P
Sbjct: 229 DLLP 232


>gi|72382182|ref|YP_291537.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|72002032|gb|AAZ57834.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 516

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 63/346 (18%), Positives = 110/346 (31%), Gaps = 79/346 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G++   I  D + R  R       V ++  + +   KI   A  ++    ++ 
Sbjct: 14  VNDKPHLGSSYTTIACDAIARFERL--NGNTVLFLTGVDEHGQKIERTAESKNLEPQLH- 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               IT K   +++ D  +L         R T   H   +      ++     Y      
Sbjct: 71  -CDEITEKY--KYLWD--KLNISY-DRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQSG 124

Query: 153 IFDTSSIPNYGSFSRRK------IDEQKMGTRVPE------------------------- 181
            +       Y     +       I ++++  R  E                         
Sbjct: 125 WYCVG-CEEYKDVEDKDKSPICSIHKKELEWRDEENLFFKLSKYQDQIEKLIHVDGFISP 183

Query: 182 KYHK--------KNPADFIL------WKRSTPM------EPGWESPWGRGRPGWHIECS- 220
           K  K        K   DF +      W  + P          +++  G      + +CS 
Sbjct: 184 KSRKNEIINFVSKGLRDFSISRVNLKWGINVPGNKDHTFYVWFDALLGYVSGSLNDQCSP 243

Query: 221 AMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            ++   L     +IH  G D++  H     A    A  ++   +++ H GFL  EG+KM 
Sbjct: 244 ELTEKSLSNWPANIHVIGKDILRFHAVYWPAMLLSA-GMKTPRSVFGH-GFLTREGQKMG 301

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           KS GN +   ELLE             +R  +L       I+F   
Sbjct: 302 KSLGNVLDPIELLEYGGI-------DAMRWYLLR-----DIEFGED 335


>gi|50083317|ref|YP_044827.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|81394060|sp|Q6FG02|SYI_ACIAD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49529293|emb|CAG67005.1| isoleucyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 945

 Score = 44.1 bits (103), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN IT  ++++     G       +R  +  + YR  +    + 
Sbjct: 604 HGFVVDEKGRKMSKSLGNIITPQDIIKDMGADG-------LRFWIASSDYRYEMTAGKEI 656

Query: 327 LTEAEILLSKWPQT 340
            + A     +   T
Sbjct: 657 FSRASDGYRRIRNT 670


>gi|313681914|ref|YP_004059652.1| isoleucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
 gi|313154774|gb|ADR33452.1| Isoleucyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
          Length = 918

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + I     +  H   ++ +G KMSKS GN +    +L       + + + ++RL +
Sbjct: 585 STAVEHIAPYKALLTHGFTVDEKGEKMSKSKGNVVAPESVL-------KEYGSEILRLWV 637

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            M+ Y+  +  +   L +      K   T
Sbjct: 638 AMSDYQGDLKISGNILKQTADQYRKLRNT 666


>gi|111022628|ref|YP_705600.1| methionyl-tRNA synthetase [Rhodococcus jostii RHA1]
 gi|110822158|gb|ABG97442.1| methionine--tRNA ligase [Rhodococcus jostii RHA1]
          Length = 519

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D L R  R    +    Y    TD         + +  +      +  
Sbjct: 26  PHIGHAYEYISSDALARFKRLDGFD---VYFMTGTD-----EHGLKMQQTAAKEGIDVRE 77

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           + ++N+  F +   +   ++     R T  +H      + + ++ +G  Y       +  
Sbjct: 78  LAARNSDVF-EAMDKTLNISFDRFIRTTDADHEEASKAIWRRMLDNGDIYLDTYSGWYSV 136

Query: 157 SSIPNY 162
                Y
Sbjct: 137 RDEAFY 142



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 9/72 (12%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-TH 315
            IE    +++H GFL  +G KMSKS GN +    ++E        +    +R  +L    
Sbjct: 290 GIELPKRVFVH-GFLYNKGEKMSKSVGNVVDPVAMVE-------QYGLDAVRFFLLREIS 341

Query: 316 YREPIDFTVQRL 327
           Y +   ++ + +
Sbjct: 342 YGQDGSYSHEAI 353


>gi|76800957|ref|YP_325965.1| isoleucyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|84029523|sp|Q3ITY7|SYI_NATPD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|76556822|emb|CAI48396.1| isoleucine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 1061

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 71/179 (39%), Gaps = 22/179 (12%)

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           ++     A        + +H   L  +GRKMSKS GN +   E ++          A  +
Sbjct: 575 QLGMGSAALGEAPYETVLMHGWALAEDGRKMSKSIGNIVAPQEAIDRHG-------ADPM 627

Query: 308 RLAMLMTHYR-EPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLN 360
           RL +L  + + + + F+   +   +  L+      ++P         DP  + AL     
Sbjct: 628 RLFLLTQNPQGDDMRFSWDEMENRQRDLNILWNVFRFPLPYMRLDDFDPDAV-ALDE--- 683

Query: 361 TVSAIQALHKLA--RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             +A++ + +    R ST   ++   +        ++     + +++S    ++V+ER+
Sbjct: 684 --AALETVDEWVLSRLSTVTAEMTDHWENFRQDKALDELLAFIVEDVSRFYIQVVRERM 740


>gi|23098939|ref|NP_692405.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81746457|sp|Q8ER41|SYI1_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|22777167|dbj|BAC13440.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 918

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+  GRKMSKS GN I  +++        +   + ++RL +
Sbjct: 569 SVAVTGKAPYKAVISHGFVLDGNGRKMSKSLGNVIVPSKV-------QKQLGSDILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +      K   T
Sbjct: 622 SSVDYQADVRISDDILKQTSESYRKIRNT 650


>gi|294648748|ref|ZP_06726207.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292825362|gb|EFF84106.1| isoleucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 945

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN IT  ++++     G       +R  +    YR  +    + 
Sbjct: 604 HGFVVDEKGRKMSKSLGNIITPQDIIKDMGADG-------LRFWIASADYRYEMTAGKEI 656

Query: 327 LTEAEILLSKWPQT 340
            + A     +   T
Sbjct: 657 FSRASDGYRRIRNT 670


>gi|293363940|ref|ZP_06610676.1| isoleucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552430|gb|EFF41204.1| isoleucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 890

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 45/111 (40%), Gaps = 7/111 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD++  G+D       + +  S           +  H   L+ +G KMSKS GN I+  
Sbjct: 541 PFDVYLEGIDQYRGWFNSSVINSVAYRGKAPYKTLISHGFVLDGKGEKMSKSKGNIISPL 600

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           ++++          A ++RL    + Y   ++ + + + +   +  K   T
Sbjct: 601 DIVKKNG-------ADILRLWAANSEYSNDVNISEKIIEQNSEIYRKVRNT 644


>gi|269957514|ref|YP_003327303.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
 gi|269306195|gb|ACZ31745.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
          Length = 541

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 41/136 (30%), Gaps = 14/136 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R  R    ++ V ++    +  +K++  A           
Sbjct: 18  VNDAPHIGHAYTTVAADVVTRWHRQR--QEDVWFLTGTDEHGEKVLRTA------TANGV 69

Query: 95  AISIITSKNTQQFVK-DTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--N 149
           +      +  +   K     L         R T   H   +   +Q++   G  Y+    
Sbjct: 70  SPQEWADRLVESAWKPVLETLDVRNDDF-IRTTEPRHESAVQAFLQDLHDKGEIYQGSYE 128

Query: 150 NEIIFDTSSIPNYGSF 165
                        G  
Sbjct: 129 GPYCVGCEEYKLPGDL 144


>gi|124515022|gb|EAY56533.1| Methionyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 673

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 9/74 (12%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    I+ H G+  + G KMSKS GN       ++  ++ G+ +    +R  +L  
Sbjct: 283 AMGLEPPRLIFAH-GWWTVNGEKMSKSRGN------AVDPIQYAGK-YGPDTLRYFLLRE 334

Query: 314 THYREPIDFTVQRL 327
             + +  DF+ + L
Sbjct: 335 GQFGQDADFSDKAL 348



 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 37/116 (31%), Gaps = 11/116 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R         +    TD         +    +   N 
Sbjct: 21  VNDIPHIGHAYTTVACDVLARTGRMSG---RPVFFLTGTD-----EHGQKVWQSAQKANL 72

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA 148
           +  I   +   +F      L         R T   HI  +  ++  +  +G  YE 
Sbjct: 73  SPQIYVDRIMPRFRDLWKTLLISNDDFV-RTTQPRHIRGVQSVLDRLWKNGEIYEG 127


>gi|90580543|ref|ZP_01236348.1| isoleucyl-tRNA synthetase [Vibrio angustum S14]
 gi|90438201|gb|EAS63387.1| isoleucyl-tRNA synthetase [Photobacterium angustum S14]
          Length = 946

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS GN
Sbjct: 559 EFNGHSADLYLEGSDQHRGWFQSSLISSVAMKDKAPYKQVLTHGFVVDGQGRKMSKSIGN 618

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 619 VVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 669


>gi|78356637|ref|YP_388086.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219042|gb|ABB38391.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 642

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 60/178 (33%), Gaps = 40/178 (22%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H    D++ PH          A   E   N+ +H  +L +   KMSKS GN I   E+  
Sbjct: 255 HLVAKDILKPHAVFWPTMLKAA-GFEPYNNLNVHGYWL-VRDTKMSKSLGNVIEPLEM-- 310

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE------AEILLSKWPQTSTSKG- 345
                   +     R  +L   H+     F+ + L        A  L + + +  +  G 
Sbjct: 311 -----AGRYGLSAFRYFLLREMHFGSDASFSEEALVARLNADLANDLGNLFSRVLSMTGK 365

Query: 346 -----IIDPAVLSALYNDL------------------NTVSAIQALHKLARESTKNHD 380
                +  PA  +A   D+                     +A+++L +L R   K  D
Sbjct: 366 YFDGVVPSPAAYTADDEDIINLAKDACRNYVRLFERVRFSNALESLWELVRALNKYVD 423



 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D L R        K   ++    +  DKI++ A +         
Sbjct: 13  VNAKPHLGHAYTTIVADALRRFHTLLG--KKTFFLTGTDEHGDKIVQAAEKN------GC 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--N 150
                    +  F      +         R T+  H   +  ++Q +   G  Y      
Sbjct: 65  TPQEYVDSISATFRDLWPSMGITY-DRFVRTTDESHKKCVQAVLQKVYDSGDIYFGEYGG 123

Query: 151 EIIFDTSSI 159
              +     
Sbjct: 124 HYCYGCERF 132


>gi|78100832|pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f
           Mutant From Thermus Thermophilus
 gi|119389107|pdb|2D5B|A Chain A, Crystal Structure Of Thermus Thermophilus Methionyl Trna
           Synthetase Y225f Mutant Obtained In The Presence Of
           Peg6000
          Length = 500

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R        T+    TD   + + RA Q        +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARWHRLDGYR---TFFLTGTDEHGETVYRAAQ-----AAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +    L   A     R T   H   +  +++ +   G  Y    E 
Sbjct: 66  DPKAFVDRVSGRFKRAWDLLGI-AYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|330963477|gb|EGH63737.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 868

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|329903782|ref|ZP_08273614.1| Isoleucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
 gi|327548213|gb|EGF32915.1| Isoleucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
          Length = 962

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 52/147 (35%), Gaps = 26/147 (17%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ EG+KMSKS GN +   ++ ++         A ++RL +
Sbjct: 608 SSMLNGCAPYKTLLTHGFVVDGEGKKMSKSVGNVVAPQKVADSLG-------ADILRLWV 660

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
             T Y   +  + + L        +   T           L A  +D N           
Sbjct: 661 GSTDYSGELSISDEILKRVTESYRRIRNTLR--------FLLANTSDFN----------A 702

Query: 372 ARESTKNHDLLPIFN-ASAHILGIEVC 397
           A ++    DLL +   A A I  ++  
Sbjct: 703 ATDAVPVADLLEVDRYALARITQLQAE 729


>gi|291166573|gb|EFE28619.1| leucine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 803

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 25/137 (18%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTE 329
           L  +G KMSKS GN I  NE+++       ++ A  +R   M +  Y  P  ++   +  
Sbjct: 575 LGPDGEKMSKSRGNVINPNEIID-------NYGADTLRTYIMFIGDYERPAVWSDSSVKG 627

Query: 330 AEILLSK---WPQTSTSKGIIDPAVLSAL-------YND-----LNTVSA--IQALHKLA 372
            +  L +     +  T +   D   +S +         D      NT  A  + A+++  
Sbjct: 628 CKRFLERVWKLQEMVTEQNEYDKKHISLMHKTIKKVSEDFENVKFNTAIAAMMTAVNQFY 687

Query: 373 RESTKNHDLLPIFNASA 389
            +       L  F    
Sbjct: 688 DDEFITRKELQDFITLL 704


>gi|152984253|ref|YP_001350532.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166229757|sp|A6VBU7|SYI_PSEA7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150959411|gb|ABR81436.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 44/115 (38%), Gaps = 18/115 (15%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +    +++T         A ++RL + 
Sbjct: 584 CAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLG-------ADILRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAVLSALY 356
            T Y   I  + Q L  +     +   T+            +K ++ P  + AL 
Sbjct: 637 STDYSGEIAVSQQILQRSADAYRRIRNTTRFLLSNLNGFDPAKDLLPPEEMLALD 691


>gi|119467784|ref|XP_001257698.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
 gi|119405850|gb|EAW15801.1| leucyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
          Length = 958

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 18/151 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +              A      I      +  
Sbjct: 65  HMGHLRVYTISDVLARFYRMRGHE--VLHPMGWDAFGLPAENAA------IERGIDPAEW 116

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI-IF 154
           T +N  +  +    ++      +  AT   P+     Q I       G AY+A   +   
Sbjct: 117 TKQNIAKMKEQLRSISTSFDWDRELATCS-PEFYEHTQRIFLMLYQKGLAYQAEALVNYD 175

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
                      +  ++D      R   K  K
Sbjct: 176 PVDKT----VLANEQVDANGFSWRSGAKVEK 202


>gi|157103464|ref|XP_001647993.1| methionine-tRNA synthetase [Aedes aegypti]
 gi|108880524|gb|EAT44749.1| methionine-tRNA synthetase [Aedes aegypti]
          Length = 553

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 53/138 (38%), Gaps = 25/138 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    + +H+ +  ++G KMSKS GN +  NE           +    IR  +L  
Sbjct: 296 AAGLEPPRKLLVHSHW-TVDGEKMSKSKGNVVDPNE-------RASLYTHEGIRYFLLRE 347

Query: 314 --THYREPIDFTVQ---RLTEAE------ILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
              H     +++     R+  AE       LLS+      +   + P V     ++ NT+
Sbjct: 348 GVAH--SDGNYSDTKIMRILNAELADTFGNLLSRCCGKVLNPEAVVPVVQQ---DEFNTL 402

Query: 363 SAIQALHKLARESTKNHD 380
           S +    K+     +  D
Sbjct: 403 SQMDVTKKMLELLNELPD 420


>gi|157829738|pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus
          Length = 500

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R        T+    TD   + + RA Q        +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARWHRLDGYR---TFFLTGTDEHGETVYRAAQ-----AAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +    L   A     R T   H   +  +++ +   G  Y    E 
Sbjct: 66  DPKAFVDRVSGRFKRAWDLLGI-AYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|71902287|ref|ZP_00684281.1| FPG and IleRS zinc finger [Xylella fastidiosa Ann-1]
 gi|71727964|gb|EAO30185.1| FPG and IleRS zinc finger [Xylella fastidiosa Ann-1]
          Length = 373

 Score = 44.1 bits (103), Expect = 0.048,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D          H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 25  AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG-------ADILRLWIAS 77

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + + L        +   T+ 
Sbjct: 78  TDYSNEMSLSQEILKRTTDAYRRIRNTTR 106


>gi|312793533|ref|YP_004026456.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312180673|gb|ADQ40843.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  +++         + A ++RL  
Sbjct: 576 AVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIIN-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  + + + +   +  K   T+ 
Sbjct: 629 VSADYTTDMRISKEIIKQLTEIYRKIRNTAR 659


>gi|296331646|ref|ZP_06874115.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675395|ref|YP_003867067.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151241|gb|EFG92121.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413639|gb|ADM38758.1| valyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 880

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R  +       P   + F+ +++       +K W  +  +   +
Sbjct: 540 ID-------KYGADSLRYFLATGS--SPGQDLRFSYEKVESTWNFANKIWNASRFALMNM 590

Query: 348 DPAVLSALY 356
           D      L 
Sbjct: 591 DGMTYDELD 599


>gi|144898684|emb|CAM75548.1| Isoleucyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 949

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN ++  E++ T+        A ++RL +
Sbjct: 602 SCGTRGRAPYDAVLTHGFVLDEDGRKMSKSLGNVVSPQEVVGTQG-------ADILRLWV 654

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + + Y + +    + L     +  +   T
Sbjct: 655 VGSDYSDDLRIGPEILKTQVDVYRRLRNT 683


>gi|291532768|emb|CBL05881.1| leucyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 797

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 15/114 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E   N+ +  G +  +G KMSKS G
Sbjct: 503 PVDQYIGGIEHAILHLLYSRFFTKVLKDAGLVEFDEPFTNL-LTQGMVIKDGSKMSKSKG 561

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK 336
           N ++  E++       + + A   RL +L        ++++ Q +  A   + +
Sbjct: 562 NVVSPEEII-------KKYGADTARLFILFAAPPERDLEWSDQGVEGAWRFIQR 608


>gi|157363213|ref|YP_001469980.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|157313817|gb|ABV32916.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 624

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/124 (14%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I+ D++ R  R    +  V ++    +   KI++ +        +  
Sbjct: 12  VNSDPHVGSAYTTIIADIIARYKRMMGYD--VFFLTGTDEHGQKILQASSS------LGK 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  +   +F +   +L         R T+  H+  + Y ++ ++ +   Y+     
Sbjct: 64  DPQSFCDELADRFKQLWKKLNITN-DGFIRTTDPNHMKVVQYFVKKMVENNDIYKGEYRG 122

Query: 153 IFDT 156
            +  
Sbjct: 123 WYCV 126



 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 17/71 (23%)

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----E 318
           ++ H G+L ++G+K+SKS GN I         K+    +   V+R  ++    R     +
Sbjct: 282 VFAH-GWLTVDGQKISKSLGNAI-------DPKYFVEEYGNDVLRFYLV----RDINFGK 329

Query: 319 PIDFTVQRLTE 329
             DF+ + L  
Sbjct: 330 DGDFSEKNLVN 340


>gi|122919781|pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a
           Mutant From Thermus Thermophilus
          Length = 502

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   +V D L R  R        T+    TD   + + RA Q        +
Sbjct: 14  VNAEPHLGHAYTTVVADFLARWHRLDGYR---TFFLTGTDEHGETVYRAAQ-----AAGE 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +    L   A     R T   H   +  +++ +   G  Y    E 
Sbjct: 66  DPKAFVDRVSGRFKRAWDLLGI-AYDDFIRTTEERHKKVVQLVLKKVYEAGDIYYGEYEG 124

Query: 153 IFDTSSIPNY 162
           ++  S    Y
Sbjct: 125 LYCVSCERFY 134


>gi|19113981|ref|NP_593069.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe 972h-]
 gi|1351163|sp|Q09828|SYLM_SCHPO RecName: Full=Putative leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|1022354|emb|CAA91210.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
           pombe]
          Length = 874

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 57/188 (30%), Gaps = 29/188 (15%)

Query: 17  EFQAIDPSN----IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
            F   D       + M+   P      HIG+ R   + D+L R  R    +         
Sbjct: 50  PFVKNDKGKKKYILSMF---PYPSGLLHIGHVRVYTISDILSRYYRMKGYK--------- 97

Query: 73  TDIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
             +   +   A     E+ +I    + S  T +N ++  + T  +           +   
Sbjct: 98  --VIHPMGWDAFGLPAENAAIENGISASSWTYENIKKMKEQTYHMNIY-FDWDREISTCN 154

Query: 130 PQMIYLIQ----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           P      Q     +   G AY+A   + +D          +  ++D      R      K
Sbjct: 155 PDYYKWSQYLFLQMFHKGLAYQAEATVNWDPVDCT---VLANEQVDSHGRSWRSGAIVEK 211

Query: 186 KNPADFIL 193
           KN   + L
Sbjct: 212 KNLRQWFL 219


>gi|28807062|dbj|BAC60332.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
          Length = 676

 Score = 44.1 bits (103), Expect = 0.049,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L+
Sbjct: 284 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLD 341

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 342 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 386

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++          ++    + +  +L         I  I    + 
Sbjct: 387 SRNAGFIAKRFEGKLSDNFAEPELY---NEFVAAADRIAELFEAREFGRAIREITALADK 443

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 444 ANQYVDE 450


>gi|320352452|ref|YP_004193791.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320120954|gb|ADW16500.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 648

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 32/159 (20%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +E    + +H  + N++  KMSKS GN +   EL+ET       +    +R  +L  
Sbjct: 273 AMGLEPYRRLHVHGYW-NVDATKMSKSLGNVVRPRELVET-------YGVDTVRYFVLR- 323

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST-----------------SKGIIDPAVLSALY- 356
                + F +     ++ +L++                       + G +     +AL+ 
Sbjct: 324 ----EMSFGLDSSFSSDAILARHNADLANDLGNLFSRSLTMIDKYAAGRVPEPETAALFA 379

Query: 357 -NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
             D   +SAI A+    +E+           A   ++G+
Sbjct: 380 PEDRELMSAIAAMFDHYQENMAAFTFHKALQAIWEVIGL 418



 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 11/119 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D   R  R           +  TD         +    +    +
Sbjct: 12  VNALPHLGHAYTTIVTDTYSRFRRLCG---DTVRFQTGTD-----EHGEKIAEAAAKAGE 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNE 151
           +      + +  F KDT  +  + P    R T  +H+  +  ++Q +   G  Y +   
Sbjct: 64  SPREYVDRISAAF-KDTWPVLAIQPDKIIRTTDADHVRTVQAILQQVHASGDIYFSEYS 121


>gi|91227376|ref|ZP_01261765.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
 gi|91188640|gb|EAS74930.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
          Length = 679

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  LE
Sbjct: 284 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLE 341

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 342 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 386

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++          ++    + +  +L         I  I    + 
Sbjct: 387 SRNAGFIAKRFEGKLSDNFAEPELY---NEFVAAADRIAELYETREFGRAIREITALADK 443

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 444 ANQYVDE 450


>gi|90579105|ref|ZP_01234915.1| methionyl-tRNA synthetase [Vibrio angustum S14]
 gi|90439938|gb|EAS65119.1| methionyl-tRNA synthetase [Vibrio angustum S14]
          Length = 681

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 66/192 (34%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                 +      +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 348 ------KHLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L ++           + A    + ++      A   I  + +   +
Sbjct: 394 SRNAGFIAKRFDGKLSDNFVEPELYAEFVEAADRIGELYESREFGRAIREITALADKANQ 453

Query: 400 HLNKNISIAIEK 411
           ++++     + K
Sbjct: 454 YVDEKAPWVVAK 465


>gi|308048542|ref|YP_003912108.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630732|gb|ADN75034.1| leucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 859

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 17/157 (10%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
             ++    KMSKS  N I   E++E        + A  +RL M+        +++    +
Sbjct: 610 ELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFAAPPELTLEWQESGV 662

Query: 328 TEAEILLSKWPQTS---TSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLP 383
             A   L +  + S    +KG      +++L ND     A+ +ALH+   + T ++    
Sbjct: 663 EGALRFLKRLWKLSHEHVAKGPAPKLDIASLNND---QKALRRALHQTIAKITDDYGRRQ 719

Query: 384 IFN-ASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            FN A A ++ +        +        L+QE L  
Sbjct: 720 TFNTAIAAVMELMNKLTKAPQESDND-RALMQEALDA 755


>gi|54308361|ref|YP_129381.1| methionyl-tRNA synthetase [Photobacterium profundum SS9]
 gi|68565982|sp|Q6LSZ7|SYM_PHOPR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46912789|emb|CAG19579.1| putative methionyl-tRNA synthetase [Photobacterium profundum SS9]
          Length = 680

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 61/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI     LE
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAGTYLE 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L              + A  + +  +L      S  I  I    + 
Sbjct: 394 SRNAGFITKRFDGKLSETFAEPELYA---EFANAADRIAELYETREFSRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ I  
Sbjct: 451 ANQYIDE 457


>gi|331014752|gb|EGH94808.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 868

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|328883600|emb|CCA56839.1| Methionyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
          Length = 535

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 40/135 (29%), Gaps = 12/135 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  DVL R  R     + V Y+    +   KI+  A     +     
Sbjct: 23  VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWYLTGTDEHGQKIMRTAEANDVTPQAWC 80

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
              +      + +      L   A     R T   H  ++   +Q++      Y+     
Sbjct: 81  DKLV-----EEAWKPLWEHLNI-ANDDFIRTTQKRHTDRVQEFVQDLYDKDEIYKGGYEG 134

Query: 151 EIIFDTSSIPNYGSF 165
                       G  
Sbjct: 135 PYCVGCEEYKLPGDL 149


>gi|306845518|ref|ZP_07478087.1| isoleucyl-tRNA synthetase [Brucella sp. BO1]
 gi|306273839|gb|EFM55666.1| isoleucyl-tRNA synthetase [Brucella sp. BO1]
          Length = 972

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +      N           +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA------NLPELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|281412227|ref|YP_003346306.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373330|gb|ADA66892.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 824

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N ++ +E++E        + A  +R+ +L M    +  +++   +      + +   T
Sbjct: 587 NVVSPDEMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFVKRLWNT 637



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 19/147 (12%)

Query: 14  KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
           K   +        + Y  V  P      H+G+ +  ++ D++ R  R           Y 
Sbjct: 20  KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGY- 78

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
               D      E A  E             T KN         +L       +  AT   
Sbjct: 79  ----DAFGLPAENAAIEK-----GIHPEEWTRKNINTIRGQVKKLGISYDWSREIAT-CD 128

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
            +     Q     +  +G AY+    +
Sbjct: 129 EEYYKWTQWIFLQLYKNGLAYKKKAAV 155


>gi|218883858|ref|YP_002428240.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765474|gb|ACL10873.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 498

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 18/130 (13%), Positives = 35/130 (26%), Gaps = 17/130 (13%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             HIG+A   +  DVL R  R   G+           +        + +  +        
Sbjct: 11  PPHIGHAYTTVFADVLARFHRLTGGKVFF--------LTGNDEHGLKIQRVAEKAGKHPK 62

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEI 152
               +    + +    L      +  R T+      + +    I      G  Y+A    
Sbjct: 63  EYVDEMANLYREYWRILNISY-DYFIRTTDPYHEKAVKEAFNYI---YGKGLIYKAKYSG 118

Query: 153 IFDTSSIPNY 162
           ++       Y
Sbjct: 119 MYCVDCEKYY 128


>gi|61657367|emb|CAI44284.1| leucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 843

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 547 PVDQYIGGVEHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 605

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N ++ +E++E        + A  +R+ +L M    +  +++   +      + +   T
Sbjct: 606 NVVSPDEMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFVKRLWNT 656



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 19/147 (12%)

Query: 14  KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
           K   +        + Y  V  P      H+G+ +  ++ D++ R  R           Y 
Sbjct: 39  KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGY- 97

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
               D      E A  E             T KN         +L       +  AT   
Sbjct: 98  ----DAFGLPAENAAIEK-----GIHPEEWTRKNINTIRGQVKKLGISYDWSREIAT-CD 147

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
            +     Q     +  +G AY+    +
Sbjct: 148 EEYYKWTQWIFLQLYKNGLAYKKKAAV 174


>gi|15642942|ref|NP_227983.1| leucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6919980|sp|Q9WY15|SYL_THEMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|4980663|gb|AAD35261.1|AE001702_1 leucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 824

 Score = 44.1 bits (103), Expect = 0.050,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N ++ +E++E        + A  +R+ +L M    +  +++   +      + +   T
Sbjct: 587 NVVSPDEMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFVKRLWNT 637



 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 41/147 (27%), Gaps = 19/147 (12%)

Query: 14  KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
           K   +        + Y  V  P      H+G+ +  ++ D++ R  R           Y 
Sbjct: 20  KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGY- 78

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
               D      E A  E             T KN     +   +L       +  AT   
Sbjct: 79  ----DAFGLPAENAAIEK-----GIHPEEWTRKNIATIRQQVKKLGISYDWSREIAT-CD 128

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
            +     Q     +  +G AY+    +
Sbjct: 129 EEYYKWTQWIFLQLYKNGLAYKKKAAV 155


>gi|325571587|ref|ZP_08147087.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325156063|gb|EGC68259.1| valine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I QS          N+ IH    + +GRKMSKS GN I   E++E        + A  +R
Sbjct: 558 IFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-------QYGADALR 610

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +        + + F+ +++  A   ++K    S 
Sbjct: 611 WFLSNGSAP-GQDVRFSYEKMDAAWNFINKIWNASR 645


>gi|319892813|ref|YP_004149688.1| Leucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
 gi|317162509|gb|ADV06052.1| Leucyl-tRNA synthetase [Staphylococcus pseudintermedius HKU10-03]
          Length = 810

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 62/171 (36%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H             +      E    ++     L     KMSKS G
Sbjct: 529 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTSEPFQKLFNQGMILGEGNEKMSKSKG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++       RS  A  +RL  M M      I ++   L  +   L + W    
Sbjct: 589 NVVNPDDIV-------RSHGADTLRLYEMFMGPLEASIAWSENGLDGSRRFLDRVWRLFV 641

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           T    +   V+       +T +   A H+  ++ T++ + L    A + ++
Sbjct: 642 TEDSQLTDKVIEG-----DTPTLQTAYHQTVKKVTEDFESLSFNTAISQLM 687


>gi|242063240|ref|XP_002452909.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
 gi|241932740|gb|EES05885.1| hypothetical protein SORBIDRAFT_04g034870 [Sorghum bicolor]
          Length = 839

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 4/125 (3%)

Query: 220 SAMSSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           +A+ +   G  F  DI+  G D      ++ +  S         +++  H   L+ +G K
Sbjct: 579 AAVLAKRGGLNFPADIYLEGSDQHRGWFQSSLLTSIATTGKAPYSSVITHGFVLDEKGFK 638

Query: 278 MSKSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           MSKS GN +   +++   K       + A V+RL +    Y   +    Q L +   +  
Sbjct: 639 MSKSVGNVVDPEKIIVGGKNQREEPGYGADVLRLWVSSVDYSTDVLIGPQILRQMSDMYR 698

Query: 336 KWPQT 340
           K   T
Sbjct: 699 KLRGT 703


>gi|228476477|ref|ZP_04061167.1| leucyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228251898|gb|EEK10944.1| leucyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 833

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVADNNGALDKVYNETVKSVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EDKL 721


>gi|170016586|ref|YP_001727505.1| valyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803443|gb|ACA82061.1| Valyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 894

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 54/139 (38%), Gaps = 21/139 (15%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           N+ IH    + EGRKMSKS GN +   +++E  
Sbjct: 495 TGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIE-- 552

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                 + A  +R  +       P   + FT  ++  A   ++K    S         V+
Sbjct: 553 -----KYGADALRWFLATGS--TPGQDVRFTYDKMDAAWNFINKIWNASRY-------VI 598

Query: 353 SALYNDLNTVSAIQALHKL 371
             L +  +T S +  L +L
Sbjct: 599 MNLDD--HTPSTLPDLTQL 615


>gi|119897496|ref|YP_932709.1| isoleucyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|166200196|sp|A1K4R7|SYI_AZOSB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119669909|emb|CAL93822.1| IleS protein [Azoarcus sp. BH72]
          Length = 932

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 48/125 (38%), Gaps = 8/125 (6%)

Query: 205 ESPWGRGRPGWH-IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           +  +  G   WH +  S    H  G   D++  G D       + +   C  D       
Sbjct: 535 DVWFDSGTTHWHVLRGSHNDGHVEGPRADLYLEGSDQHRGWFHSSLLTGCAIDGHPPYNA 594

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +  H   ++ +GRKMSKS GN I   E+ E          A ++RL +  T Y   +  +
Sbjct: 595 LLTHGFTVDQQGRKMSKSLGNTILPQEVSEKMG-------AEILRLWVASTDYSGELSIS 647

Query: 324 VQRLT 328
            + L 
Sbjct: 648 KEILD 652


>gi|92112614|ref|YP_572542.1| isoleucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123084221|sp|Q1R0B5|SYI_CHRSD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91795704|gb|ABE57843.1| Isoleucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 946

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +GRKMSKS GN I   ++++          A ++RL + 
Sbjct: 585 CAIDGHAPYKALLTHGFTVDEKGRKMSKSMGNVIAPQQVMDKLG-------ADILRLWVA 637

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   +  + + L     +  +   TS 
Sbjct: 638 STDYSGEMAVSDEILKRTADVYRRIRNTSR 667


>gi|161511054|ref|NP_798448.2| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
 gi|260879483|ref|ZP_05891838.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|260898218|ref|ZP_05906714.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|260903217|ref|ZP_05911612.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
 gi|61252102|sp|Q87N07|SYM_VIBPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|308088382|gb|EFO38077.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308093540|gb|EFO43235.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
 gi|308106544|gb|EFO44084.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
          Length = 688

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L+
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLD 353

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 354 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 398

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++          ++    + +  +L         I  I    + 
Sbjct: 399 SRNAGFIAKRFEGKLSDNFAEPELY---NEFVAAADRIAELFEAREFGRAIREITALADK 455

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 456 ANQYVDE 462


>gi|307720508|ref|YP_003891648.1| leucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978601|gb|ADN08636.1| leucyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 823

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 9/86 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G +  +G KMSKS GN +  + ++E        + A   RL +L      
Sbjct: 574 EPFERL-LTQGMVLKDGAKMSKSKGNTVDPDAIIE-------KYGADTARLFILFAAPPT 625

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTS 343
           + +++    +  A   + ++ + ST+
Sbjct: 626 QELEWNDSAVEGAYKFIKRFFERSTN 651


>gi|289547884|ref|YP_003472872.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289181501|gb|ADC88745.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 604

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 43/148 (29%), Gaps = 16/148 (10%)

Query: 14  KITEFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           +   F+  +    ++YV    P      H+G+ R   + D + R LR     K V +   
Sbjct: 19  EKGVFKTEEKGE-KVYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLRMRG--KAVLHPMG 75

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
                      A +           +  T  N         RL       +  AT   P+
Sbjct: 76  WDAFGLPAENAAIKHGVH------PAQWTKSNISYMRDQLRRLGFSYDWDREIAT-CDPE 128

Query: 132 MIYLIQ----NIILHGHAYEANNEIIFD 155
                Q      +  G AY    E+ + 
Sbjct: 129 YYRWNQWIFLKFLEKGLAYRKEAEVNYC 156


>gi|209875935|ref|XP_002139410.1| leucyl-tRNA synthetase  [Cryptosporidium muris RN66]
 gi|209555016|gb|EEA05061.1| leucyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
          Length = 1128

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 12/87 (13%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEK-TANIWIHNGFLNLEGRKMSKSNGN 284
             D    G DLIF H      N +A    +   +K     +  NG + ++  KMSKS GN
Sbjct: 706 PMDCRVSGKDLIFNHLIMCLYNHVAIWDKSTMADKFWPKGFYCNGHIMVDSAKMSKSLGN 765

Query: 285 FITINELLETKKFGGRSWPAPVIRLAM 311
           +IT+++       G   + +   R+A+
Sbjct: 766 WITLHD-------GINEFTSDACRIAL 785


>gi|28871927|ref|NP_794546.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|32130171|sp|Q87VX3|SYL_PSESM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28855180|gb|AAO58241.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 868

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|85712277|ref|ZP_01043328.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693904|gb|EAQ31851.1| Isoleucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 944

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     +  H   ++ +GRKMSKS GN +   +++             ++RL +  
Sbjct: 586 AMYEQAPYRQVLTHGFTVDAQGRKMSKSIGNVVAPQDVMNKLG-------GDILRLWVAS 638

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L  +     +   TS 
Sbjct: 639 ADYSGEMTVSDEILKRSADAYRRIRNTSR 667


>gi|238789828|ref|ZP_04633609.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
 gi|238722024|gb|EEQ13683.1| Methionyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
          Length = 675

 Score = 44.1 bits (103), Expect = 0.051,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 76/193 (39%), Gaps = 20/193 (10%)

Query: 228 GKVFDI-HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   D+ H  G D+++ H     A    +   + T NI++H G++ + G KMSKS G FI
Sbjct: 284 GSTTDLYHFIGKDIVYFHSLFWPAILEGSHFRKPT-NIFVH-GYVTVNGAKMSKSRGTFI 341

Query: 287 TINELLETKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ- 339
             +  L       +   A  +R      L +  R + ID  ++   +      ++K    
Sbjct: 342 KASTYL-------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNL 392

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCK 398
            S + G I+      L + L   +  +     A    + ++      A   I+ + +V  
Sbjct: 393 ASRNAGFINKRFAGKLADQLADPALYKTFTDAAASIAEAYNNRESGKAIREIMALADVAN 452

Query: 399 EHLNKNISIAIEK 411
            ++++     + K
Sbjct: 453 RYVDEQAPWVVAK 465


>gi|221310749|ref|ZP_03592596.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315074|ref|ZP_03596879.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319993|ref|ZP_03601287.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324275|ref|ZP_03605569.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767644|ref|NP_390687.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|251757438|sp|Q05873|SYV_BACSU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|225185272|emb|CAB14769.2| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R  +       P   + F+ +++       +K W  +  +   +
Sbjct: 540 ID-------KYGADSLRYFLATGS--SPGQDLRFSYEKVESTWNFANKIWNASRFALMNM 590

Query: 348 DPAVLSALY 356
           D      L 
Sbjct: 591 DGMTYDELD 599


>gi|218441945|ref|YP_002380274.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|254782386|sp|B7KFT1|SYI_CYAP7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|218174673|gb|ACK73406.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 959

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 6/139 (4%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L    DI+  G D      ++ +  S   + I     +  H   L+ +GRKMSKS GN +
Sbjct: 560 LSYPVDIYLEGSDQHRGWFQSSLLTSVATNGIAPYKMVLTHGFVLDEQGRKMSKSIGNIV 619

Query: 287 TINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
             N ++   K   +   + A V+RL +    Y   +      L +   + +K   T+   
Sbjct: 620 DPNMIINGGKDQKKEPAYGADVLRLWVSSVDYSSDVPIGQNILKQLVDVRNKIRNTARFL 679

Query: 343 --SKGIIDPAVLSALYNDL 359
             +    DP   +  Y DL
Sbjct: 680 LGNLHDFDPEKDTVAYEDL 698


>gi|321312340|ref|YP_004204627.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018614|gb|ADV93600.1| valyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 880

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R  +       P   + F+ +++       +K W  +  +   +
Sbjct: 540 ID-------KYGADSLRYFLATGS--SPGQDLRFSYEKVESTWNFANKIWNASRFALMNM 590

Query: 348 DPAVLSALY 356
           D      L 
Sbjct: 591 DGMTYDELD 599


>gi|296272307|ref|YP_003654938.1| isoleucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096481|gb|ADG92431.1| isoleucyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 908

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 20/128 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN I   +++       + + + ++RL + M+ Y+     +   
Sbjct: 590 HGFTMDEKGEKMSKSKGNVIDPAKIM-------KQYGSEILRLWVAMSDYQNDQKISDNI 642

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ---ALHKLARESTKNHDLLP 383
           L +   L  K   T+          L A  +DL T+  I+    L K      K+  +  
Sbjct: 643 LKQNAELYRKIRNTAR--------FLLANISDLETIVDIKDFGVLDKWI--MNKSKKVFD 692

Query: 384 IFNASAHI 391
             +AS  +
Sbjct: 693 EIDASFSV 700


>gi|291485223|dbj|BAI86298.1| valyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 880

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R  +       P   + F+ +++       +K W  +  +   +
Sbjct: 540 ID-------KYGADSLRYFLATGS--SPGQDLRFSYEKVESTWNFANKIWNASRFALMNM 590

Query: 348 DPAVLSALY 356
           D      L 
Sbjct: 591 DGMTYDELD 599


>gi|149195254|ref|ZP_01872343.1| isoleucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149134596|gb|EDM23083.1| isoleucyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 911

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   ++     +I  H   ++ +G KMSKS GN +  +E+        R +   ++RL +
Sbjct: 580 STAIEKKAPYKSILTHGFTVDEKGEKMSKSKGNVVAPSEV-------ARKFGTEILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y   I      L +      K   T
Sbjct: 633 ATSDYSSDIKLGENILKQVAEQYRKIRNT 661


>gi|116052703|ref|YP_793019.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122257287|sp|Q02GB7|SYI_PSEAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115587924|gb|ABJ13939.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 9/120 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +    +++T         A ++RL + 
Sbjct: 584 CAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLG-------ADILRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            T Y   I  + Q L  +     +   T+           +A   DL     + AL + A
Sbjct: 637 STDYSGEIAVSQQILQRSADAYRRIRNTTRFLLSNLNGFDAA--TDLLPPQEMLALDRWA 694


>gi|81428459|ref|YP_395459.1| valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|90101528|sp|Q38XD1|SYV_LACSS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|78610101|emb|CAI55150.1| Valyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 882

 Score = 44.1 bits (103), Expect = 0.052,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 35/210 (16%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          ++ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTEQRPFEHVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  +       + + F+  ++  A   ++K    S         V+  
Sbjct: 541 -----KYGADALRWFLTSGSTPGQDVRFSYTKMDAAWNFINKIWNASR-------FVIMN 588

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHIL----GIEVCKEH-------LN 402
           L +   T  A   + + A     +  +L   N   A +     G E  +          N
Sbjct: 589 LED---TP-APTKVPEAANLDLTDKWILSQLNQTVADVTRLYEGFEFGEAGRTLYNFIWN 644

Query: 403 KNISIAIEK----LVQERLILLKMKKFSSA 428
                 IE     L  +    +  K+++ A
Sbjct: 645 DFCDWYIEMAKEVLYGDDQEAIANKRYNLA 674


>gi|315452755|ref|YP_004073025.1| isoleucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131807|emb|CBY82435.1| isoleucyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 936

 Score = 44.1 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 8/121 (6%)

Query: 221 AMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           A+    LG    D+   G D      ++ +  SC          +  H   ++ +G KMS
Sbjct: 568 AVCEERLGVYPSDLVLEGSDQHRGWFQSSLLLSCIKHSRAPFKGVLTHGFTVDAKGHKMS 627

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN  +++E+L T       + + ++RL ++M  Y++ +  +     +      K   
Sbjct: 628 KSKGNVFSLDEVLNT-------YGSDILRLWVVMNDYQDNLSVSHAFFAQTAEGYKKVRN 680

Query: 340 T 340
           T
Sbjct: 681 T 681


>gi|226365134|ref|YP_002782917.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
 gi|226243624|dbj|BAH53972.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
          Length = 519

 Score = 44.1 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D L R  R    +    Y    TD         + +  +      +  
Sbjct: 26  PHIGHAYEYISSDALARFKRLDGFD---VYFMTGTD-----EHGLKMQQTAAKEGIDVRE 77

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           + ++N+  F +   +   ++     R T  +H      + Q ++  G  Y       +  
Sbjct: 78  LAARNSDVF-EAMDKTLNISFDRFIRTTDADHEEASKAIWQRMLEAGDIYLDTYSGWYSV 136

Query: 157 SSIPNY 162
                Y
Sbjct: 137 RDEAFY 142



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 23/150 (15%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-TH 315
            IE    +++H GFL  +G KMSKS GN +    ++E        +    +R  +L    
Sbjct: 290 GIELPKRVFVH-GFLYNKGEKMSKSVGNVVDPVAMVE-------QYGLDAVRFFLLREIS 341

Query: 316 YREPIDFTVQRL-----TEAEILLSKWPQTSTS--KGIIDPAVLS--ALYNDLNTVSAIQ 366
           Y +   ++ + +      +    L    Q S S      D  V +  AL +D +T   + 
Sbjct: 342 YGQDGSYSHEAIVTRINADLANELGNLAQRSLSMVAKNCDAQVPTPGALTDD-DTAM-LA 399

Query: 367 ALHKLARESTKNHDLLPI---FNASAHILG 393
               L       +D+  +     A   +LG
Sbjct: 400 QADALLERVRAEYDVQALHLALEAIWSVLG 429


>gi|124023208|ref|YP_001017515.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|166231629|sp|A2C9U0|SYL_PROM3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123963494|gb|ABM78250.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 878

 Score = 44.1 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 38/120 (31%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R  ++ DV+ R+ R       V +              A      I  N      
Sbjct: 63  HMGHVRNYVITDVIARVQRMRG--DAVLHPMGWDAFGLPAENAA------IARNVDPGDW 114

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T +N  Q      RL       + +AT H        Q     +   G AY+    + +D
Sbjct: 115 TDQNIAQMRAQLDRLGLSIDWDRQQATCH-QDYYRWTQWLFLELFAGGLAYQKEATVNWD 173


>gi|228993397|ref|ZP_04153313.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
 gi|228766465|gb|EEM15108.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
          Length = 231

 Score = 44.1 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 394 IEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           IE  +  L   +    I  L+  R + LK KK  +A Y+R+ L   G ++ D KN  
Sbjct: 163 IEYQRWALGHPDFPEKINALLHARELALKEKKVDTAKYLREDLAKLGVVIRDEKNGQ 219


>gi|220908492|ref|YP_002483803.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|254782385|sp|B8HMX3|SYI_CYAP4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219865103|gb|ACL45442.1| isoleucyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 955

 Score = 44.1 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 40/105 (38%), Gaps = 6/105 (5%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S     I     +  H   L+ +GRKMSKS GN +    ++E  K       + A ++RL
Sbjct: 579 SVATHGIAPYKTVLTHGFVLDEQGRKMSKSLGNVVDPAIVIEGGKNQKEDPPYGADILRL 638

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPA 350
            +    Y   +      L +   +  K   T+     +    DPA
Sbjct: 639 WVSSVDYSSDVPLGKNILKQMADIYRKIRNTARFLLGNLHDFDPA 683


>gi|66808845|ref|XP_638145.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996820|sp|Q54MZ8|SYMM_DICDI RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
           AltName: Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|60466665|gb|EAL64717.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 575

 Score = 44.1 bits (103), Expect = 0.053,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 14/130 (10%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           YV GP      HIG+    ++ D L R  R+        ++    +   K+ E A++   
Sbjct: 53  YVNGP-----PHIGHLYSALLGDALGRWNRFIG--NDTLFMTGTDEHGSKVDEAAKKNGL 105

Query: 89  SIPINDAISIITSKNTQQFVK-DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                D    I+++  + F K D      +  T +PR    +  +      ++  G+ Y+
Sbjct: 106 KTI--DYCDKISNRFRELFDKADIKYDDFIR-TTEPRHKEAVTAIWN---RLLERGYIYK 159

Query: 148 ANNEIIFDTS 157
              +  + TS
Sbjct: 160 GVYKGWYCTS 169


>gi|317181105|dbj|BAJ58891.1| isoleucyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 15/149 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCILNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYN----DLNTV 362
           +    Y+  +  +    T+ E    K+  T      +   +D   L   +N    D   +
Sbjct: 637 VAFNDYQNDLRVSQTFFTQTEQHYKKFRNTLKFLLANFSDMDLKNLERSHNFSPLDHFIL 696

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHI 391
            A++ +      + + HD +   N     
Sbjct: 697 EALETISAGVNSAFEEHDFVKGLNILMAF 725


>gi|300741759|ref|ZP_07071780.1| methionine--tRNA ligase [Rothia dentocariosa M567]
 gi|300380944|gb|EFJ77506.1| methionine--tRNA ligase [Rothia dentocariosa M567]
          Length = 515

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 45/152 (29%), Gaps = 15/152 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R    +     VR +T  D+      + +  +     
Sbjct: 15  PNGNPHIGHAYETIAADVLARFKRLDGFD-----VRFMTGTDEH---GQKMQTTAEKQGK 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N+ +F      L         R T  +H      + + +  +G  Y      
Sbjct: 67  TAKELADENSARFKAMNDALGISY-DRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +       Y         E++ G R      
Sbjct: 126 WYSVRDEAYYAE----DETEERDGQRYAISTG 153



 Score = 40.2 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    ++ H GFL + G KMSKS GN +   +L
Sbjct: 257 DLHLIGKDITRFHSIYWPAFLWSA-GLELPKRVFGH-GFLLVNGEKMSKSVGNVVDPADL 314

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +              +R  ++
Sbjct: 315 VAAFGL-------DQVRFFLM 328


>gi|208435292|ref|YP_002266958.1| isoleucyl-tRNA synthetase [Helicobacter pylori G27]
 gi|254782410|sp|B5Z943|SYI_HELPG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|208433221|gb|ACI28092.1| isoleucyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 920

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 11/124 (8%)

Query: 221 AMSSHYLGK----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
           A+   Y G+      D+   G D      ++ +   C  +       +  H   ++ +G 
Sbjct: 550 AVLEDYYGEKGQSPSDVILEGSDQHRGWFQSSLLIGCVLNNQAPFKKVITHGFIVDEKGE 609

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
           KMSKS GN ++++ LL+          + V+RL +    Y+  +  +     + E    K
Sbjct: 610 KMSKSKGNVVSLDNLLKKHG-------SDVVRLWVAFNDYQNDLRVSQTFFIQTEQHYKK 662

Query: 337 WPQT 340
           +  T
Sbjct: 663 FRNT 666


>gi|86171431|ref|XP_966210.1| leucyl tRNA synthase [Plasmodium falciparum 3D7]
 gi|46361176|emb|CAG25040.1| leucyl tRNA synthase [Plasmodium falciparum 3D7]
          Length = 1447

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 35/108 (32%), Gaps = 38/108 (35%)

Query: 230  VFDIHGGGLDLIFPHHE----NEIAQS--------------------------------- 252
             FD+   G DLIF H      N +A                                   
Sbjct: 900  PFDVRISGKDLIFNHLTMALFNHVAIWGKKEKYDRNKEDVEERSILDRQTEILNELENID 959

Query: 253  -CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
                ++I+     +  NG + +   KMSKS GNFIT+ E +      G
Sbjct: 960  LSSYEKIKYFPRSFFCNGHVLVNKEKMSKSKGNFITLEESIALYTSDG 1007


>gi|23100470|ref|NP_693937.1| arginyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|38372527|sp|Q8EM45|SYR_OCEIH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|22778703|dbj|BAC14971.1| arginine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 556

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 69/411 (16%), Positives = 122/411 (29%), Gaps = 70/411 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+AR     DVL  +      E    Y  N  D  ++I             
Sbjct: 134 PT--GDLHLGHARNAAFGDVLCNVFAAAGYEVEREYYIN--DAGNQI------------- 176

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI-YLIQNIILHGHAYEANNE 151
           N+    + ++  Q+  +D      +           I ++   L++          A+ +
Sbjct: 177 NNLGLSVEARYLQEIGQDVD----MPEDGYQG--QAIIEIAKELVKKDGEK----WADKD 226

Query: 152 IIFDTSSIPNYG-SFSRRKIDEQKMGTRVP-----------------------EKYHKKN 187
                     YG   S R I+      RV                        +      
Sbjct: 227 HEERLDFFKEYGLKASLRNIESDLKDFRVEFDHWFSERSLFKDGQIDDTLAVLDDGGYTF 286

Query: 188 PADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFP 243
             D  LW ++T      +     G G   +     A   + L + FD  I+  G D    
Sbjct: 287 EKDGALWFKTTEFGDDKDRVLIKGDGNYTYLTPDIAYHKNKLDRGFDRIINVWGSDHHGY 346

Query: 244 HHENEIAQSCCADRIEKT--ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
                 A       +EK     I + N F   E  KMSK  G  +++ EL++        
Sbjct: 347 IPRMRAALQALGYPVEKFDVKIIQMVNLFEAGEKVKMSKRTGKAVSLRELMDEVGI---- 402

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
                +R   +       +DF +  L +++   +       +   I   +  A     NT
Sbjct: 403 ---DAVRYYFVARSNDSQLDFDMD-LAKSQSNDNPVYYAQYAHARICTMLSQAKSKGFNT 458

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
                        + K  DLL        ++ ++   +H    ++  I +L
Sbjct: 459 ---EAEFDASLLTAEKELDLLKKIGELPQMI-VDAADKHTPHKVTQYIFEL 505


>gi|452309|emb|CAA54458.1| valyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 880

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 13/129 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDEQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R  +       P   + F+ +++       +K W  +  +   +
Sbjct: 540 ID-------KYGADSLRYFLATGS--SPGQDLRFSYEKVESTWNFANKIWNASRFALMNM 590

Query: 348 DPAVLSALY 356
           D      L 
Sbjct: 591 DGMTYDELD 599


>gi|94984831|ref|YP_604195.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
 gi|94555112|gb|ABF45026.1| methionyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
          Length = 670

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 68/337 (20%), Positives = 109/337 (32%), Gaps = 84/337 (24%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              HIG+    I+ D L R  R    +  VT+V    +  +KI + A +   +       
Sbjct: 23  GAPHIGHVYEKILADALARYHRLAGYD--VTFVTGTDEHGEKIAKAAAKAGQTPQTFVDD 80

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNE 151
             +     + F     RL         R T       + +++   Q +   G  Y A  E
Sbjct: 81  LSL-----RAFKGLWDRLEISYDDF-IRTTEGRHKRFVAEIL---QRVYDAGDIYFAEYE 131

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTR------VPEKYHKKNPADFIL-----WKRST-P 199
            ++   +       + +++ E   G R       P +  ++    F +     W R+   
Sbjct: 132 GLYSVGAER---YVTEKELVEGPDGVRRYPGDKDPPELRREANYFFRMEKYQDWLRAHIE 188

Query: 200 MEPGWESPWGRG-----------------RP----GWHIEC------------------- 219
             P +  P G                   RP     W IE                    
Sbjct: 189 QNPDFIQPAGYRNEVLEMLREPIGDLSISRPKSRVPWGIELPWDPDHVTYVWFDALLNYV 248

Query: 220 SAMSSHYLGKVFDI----HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           SA  S  LG+   I    H  G D++ PH          A  +     + +H+  L  +G
Sbjct: 249 SAPVSRGLGEE-TIGKAWHVIGKDILKPHAVFWPTMLRAA-GLPIYRKLVVHSHILAEDG 306

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           RKM KS GN I   +L+       R +P   IR  +L
Sbjct: 307 RKMGKSLGNAIDPEQLV-------REYPVDAIRYTLL 336


>gi|224067060|ref|XP_002189937.1| PREDICTED: leucyl-tRNA synthetase [Taeniopygia guttata]
          Length = 1177

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 53/163 (32%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A           A     NG L L   KMSKS 
Sbjct: 665 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWSEQREKWPVAVR--ANGHLLLNSEKMSKST 722

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 723 GNFLTLTQAVD-------KFSADGMRL----------------ALADAGDTVE------- 752

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 753 -----DANFVEAMAD-----AGILRLYTWVEWVKEMIANRDSL 785


>gi|254423822|ref|ZP_05037540.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
 gi|196191311|gb|EDX86275.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7335]
          Length = 963

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN +    ++E      +   + A V+RL
Sbjct: 579 SVATNGHAPYHQVLTHGYVLDENGRKMSKSLGNGVDPKVIIEGGNNKKQEPPYGADVLRL 638

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +   ++ + +   +  K   T+ 
Sbjct: 639 WVSSVDYSGDMRLGMRNVKQMSDVYRKIRNTAR 671


>gi|164663379|ref|XP_001732811.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
 gi|159106714|gb|EDP45597.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
          Length = 532

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 46/141 (32%), Gaps = 19/141 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRL--LRYYYG-------EKCVTYVRNITDIDDKIIERARQ 85
           V    HIG+    ++ DVL R   LRY              T     T  D+  ++    
Sbjct: 14  VNAEPHIGHLHSSVMADVLRRYAELRYRGWSTYGTIPNDETTRALMTTGTDEHGLK---I 70

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH--- 142
           +  +  +      +  + +Q+F           PT   R T      I  +Q++      
Sbjct: 71  QRVAETMGVEPRALCDRVSQRFEALARAADIE-PTRFIRTTE--DTHIAAVQHVWNKLAC 127

Query: 143 -GHAYEANNEIIFDTSSIPNY 162
            GH Y   ++  +  S    Y
Sbjct: 128 HGHIYLGEHQGWYAVSDEAFY 148


>gi|124265411|ref|YP_001019415.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|189030288|sp|A2SC91|SYL_METPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124258186|gb|ABM93180.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 897

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 43/140 (30%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + Y C    Y     H+G+ R   + D++ R LR       +          D  
Sbjct: 36  DTSRPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGYNVLMPMGW------DAF 89

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ +I    A +  T  N          L  LA           P      Q  
Sbjct: 90  GLPA--ENAAIDKKVAPAQWTRDNIADMKSQMQPLG-LAFDWSREVATCDPDYYKWNQWF 146

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY+    + +D
Sbjct: 147 FLKLLEKGIAYKKTQVVNWD 166


>gi|319401064|gb|EFV89283.1| leucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 804

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLII 635

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
           T +  I+  ++ +                  D +T+S   AI  L     E  K +++
Sbjct: 636 TDENSINKKIVDSNDHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEV 693


>gi|300173956|ref|YP_003773122.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299888335|emb|CBL92303.1| Valyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 894

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 52/138 (37%), Gaps = 17/138 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           N+ IH    + EGRKMSKS GN +   +++E  
Sbjct: 495 TGYDIIFFWVARMMFQGKEFTGQRPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIE-- 552

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  +       + + FT  ++  A   ++K    S             
Sbjct: 553 -----KYGADALRWFLATGSTPGQDVRFTYDKMDAAWNFINKIWNASR---------YVI 598

Query: 355 LYNDLNTVSAIQALHKLA 372
           +  D  T S +  L KL+
Sbjct: 599 MNLDEKTPSTLPDLDKLS 616


>gi|311113865|ref|YP_003985087.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
 gi|310945359|gb|ADP41653.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
          Length = 515

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 45/152 (29%), Gaps = 15/152 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  DVL R  R    +     VR +T  D+      + +  +     
Sbjct: 15  PNGNPHIGHAYETIAADVLARFKRLDGFD-----VRFMTGTDEH---GQKMQTTAEKQGK 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N+ +F      L         R T  +H      + + +  +G  Y      
Sbjct: 67  TAKELADENSARFKAMNDALGISY-DRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +       Y         E++ G R      
Sbjct: 126 WYSVRDEAYYAE----DETEERDGQRYAISTG 153



 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    ++ H GFL + G KMSKS GN +   +L
Sbjct: 257 DLHLIGKDITRFHSIYWPAFLWSA-GLELPKRVFGH-GFLLVNGEKMSKSVGNVVDPADL 314

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +              +R  ++
Sbjct: 315 VAAFGL-------DQVRFFLM 328


>gi|218777886|ref|YP_002429204.1| methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|218759270|gb|ACL01736.1| Methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 643

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 64/354 (18%), Positives = 109/354 (30%), Gaps = 88/354 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D   R  +     +   ++    +  DK++E A +E      N 
Sbjct: 14  VNARPHLGHAYTTIVADTAKRYHQLRG--QDAYFLTGTDEHGDKVVEAAEKE------NK 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
            +       +  F      L         R T  +HI  +  ++Q I  +G  Y +  E 
Sbjct: 66  EVRDYVDMISGLFRNLWPELLISN-DQFIRTTDADHIKVVQEVLQKIYDNGDIYFSEYEG 124

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
           ++       Y    R  +D +     V  K  K++   F + K    +    +   G  R
Sbjct: 125 LYCFGCERFY--LERELVDGKCPDHEVEPKKIKESNYFFRMSKYQDWLIDHIKKNPGFIR 182

Query: 213 PGWHIECSAMSSHYLGKVF-DI--------HGGGLDLIFPHHENEI-----------AQS 252
           P  +   +     +L +   D+           G+DL F   EN +           A +
Sbjct: 183 PQRY---ANEVLSFLKEPLEDLCISRPKTRLTWGIDLPF--DENYVTYVWFDALLNYASA 237

Query: 253 CCADRIEKTANIWIHNGFL----------------------------------NLEGRKM 278
                 EK    W     +                                  N+   KM
Sbjct: 238 LGYPEGEKFQKYWPGVQHVVAKDILKPHGIYWPTMMKAAGIPVYNHLNVHGYWNVADSKM 297

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---ID--FTVQRL 327
           SKS GN +   EL        + +     R  ++    RE    +D  F+ + L
Sbjct: 298 SKSLGNVVEPLEL-------SKKYGIEQFRYFLM----REMTFGLDSSFSEEAL 340


>gi|14285783|sp|Q9RSF0|SYL_DEIRA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 823

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 62/254 (24%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H       +          + E  A +      L  +G KMSKS G
Sbjct: 537 PVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMVLGEDGEKMSKSRG 596

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAEILLSKW-- 337
           N +  ++L+       R + A  +R  ++      P +    +  Q +      LS+   
Sbjct: 597 NVVDPDDLV-------REYGADTVRAFLMFI---APWELGGPWDPQGINGPSKWLSRVWN 646

Query: 338 ---------PQTSTSKGIIDPAVLSAL---YND-----LNTVSAIQALHKLARESTKNHD 380
                    P+       +  AV SAL    +D      NT+  I  L +L     K   
Sbjct: 647 VFFEEKVSGPEEKMQGADVRFAVHSALKKVNDDFERMSFNTI--ISTLMELTNALVKA-- 702

Query: 381 LLPIFNASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMK------KFSSADY- 430
                   + + G  V +E L   N+ ++  +  + +E       K      ++   D  
Sbjct: 703 ------KRSPVFGTPVWEEALDIFNRMLAPVVPHIAEEIWHERGQKGSVHTAQWPQVDEA 756

Query: 431 --IRKQLESKGFIL 442
             +R  +   G  +
Sbjct: 757 AAVRDTVT-IGVQV 769


>gi|89072554|ref|ZP_01159126.1| isoleucyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89051658|gb|EAR57111.1| isoleucyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 946

 Score = 44.1 bits (103), Expect = 0.054,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D      ++ +  S           +  H   ++ +GRKMSKS GN
Sbjct: 559 EFNGHSADLYLEGSDQHRGWFQSSLISSVAMKDKAPYKQVLTHGFVVDGQGRKMSKSIGN 618

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +   ++            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 619 VVAPKDVTNKLG-------ADILRLWVASTDYTGEVAVSDEILKRSADAYRRIRNTAR 669


>gi|321460980|gb|EFX72016.1| hypothetical protein DAPPUDRAFT_227683 [Daphnia pulex]
          Length = 1566

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 29/197 (14%), Positives = 56/197 (28%), Gaps = 51/197 (25%)

Query: 10  TLERKIT-EFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           T  RK   +F  +   +   + +    P    + HIG+A+  +    L +  +  +    
Sbjct: 180 TSTRKEEGKFVDLPGAEEGKVVVRFP-PEASGYLHIGHAKAAL----LNQYYQQLFKG-- 232

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
            T +    D +    E A  E                     ++D   L           
Sbjct: 233 -TLIMRFDDTN-PAKENAEFEKVI------------------LEDLEMLQIKY-DKLTHT 271

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           ++H   +    + ++  G AY  + +   +T                        E  ++
Sbjct: 272 SDHFDLIERYCEQMLKEGKAYIDDTD--PETMKQERDQKL---------------ESKNR 314

Query: 186 KNPAD--FILWKRSTPM 200
            N  D  F LWK     
Sbjct: 315 VNSVDTNFALWKEMKNG 331


>gi|242243018|ref|ZP_04797463.1| leucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233476|gb|EES35788.1| leucyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 805

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLII 636

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
           T +  I+  ++ +                  D +T+S   AI  L     E  K +++
Sbjct: 637 TDENSINKKIVDSNDHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEV 694


>gi|152980423|ref|YP_001352518.1| isoleucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
 gi|166229744|sp|A6SW71|SYI_JANMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|151280500|gb|ABR88910.1| isoleucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
          Length = 958

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   ++ +T         A ++RL +  T Y   +  + + 
Sbjct: 621 HGFTVDGEGKKMSKSLGNTLAPQKISDTLG-------ADILRLWIASTDYSGELSISDEI 673

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSA 354
           L        +   T            +A
Sbjct: 674 LKRVTESYRRIRNTVRFLLSNTSDFDAA 701


>gi|71276193|ref|ZP_00652472.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
 gi|71162954|gb|EAO12677.1| Isoleucyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D          H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + + L        +   T+ 
Sbjct: 648 TDYSNEMSLSQEILKRTTDAYRRIRNTTR 676


>gi|332974224|gb|EGK11157.1| methionine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 677

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 71/185 (38%), Gaps = 17/185 (9%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             I+ H GFL ++G+KMSKS G FIT    LE
Sbjct: 288 HFIGKDILYFHALFWTAMLE-FSGHRAPTGIFAH-GFLTVDGQKMSKSRGTFITAKSYLE 345

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+     L +    ++     K+    + + G I
Sbjct: 346 ------QGLNPEWMRYYI-AAKLNSKIEDIDLNLQDFIARVNSDLVGKYVNIAARASGFI 398

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNIS 406
                 +L  D++    I  L + +     +++      A   I+G+ ++  E+++ N  
Sbjct: 399 AKRFSGSLQ-DVSGSKLIAQLTEKSESIANDYESREYAKALREIMGLADLVNEYVDANKP 457

Query: 407 IAIEK 411
             + K
Sbjct: 458 WELAK 462


>gi|325921003|ref|ZP_08182886.1| Isoleucyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548510|gb|EGD19481.1| Isoleucyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 943

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 41/109 (37%), Gaps = 12/109 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDP-AVLSALYN 357
             Y   +  + + L        +   T+     +    DP   L AL +
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTARFLLGNLHGFDPLQHLVALDD 696


>gi|307594840|ref|YP_003901157.1| leucyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550041|gb|ADN50106.1| leucyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 1013

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 8/103 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    +         +        N ++  EG KMS+S GN + +       
Sbjct: 633 SGPDLISSHLSFFVFHHVAIFPEKYWPRAITFNEYVIREGMKMSRSLGNVLPL------- 685

Query: 296 KFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKW 337
            +  R +   + RL +   T     +D+    +      L ++
Sbjct: 686 PYIPRKYSTDLARLYLASATDLDSTLDWREDDVASVASRLVRF 728



 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 2/54 (3%)

Query: 22 DPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           P   + +  V  P V    HIG+ R   + D++ R  R            +IT
Sbjct: 41 KPGKPKYFITVPYPYVSGSPHIGHGRTFTIGDIIARYKRARGFNVLFPIAWHIT 94


>gi|229062703|ref|ZP_04200011.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228716572|gb|EEL68271.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 544

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE         +  I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTVKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|227822152|ref|YP_002826123.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
 gi|227341152|gb|ACP25370.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
          Length = 516

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 13/127 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    E  V ++    +   K+ + AR+E        +   
Sbjct: 20  PHIGHAYELIATDAMARYQRLDGRE--VFFLTGTDEHGQKMQQTARKE------GVSPQE 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
           +  +N+ +F K    L         R T    H       I  +   G  Y+ +    + 
Sbjct: 72  LADRNSAEFEKMAEVLNASNDDF-IRTTEKRHHEASQAIWI-RMGEAGDLYKDSYAGWYS 129

Query: 156 TSSIPNY 162
                 Y
Sbjct: 130 VRDEAYY 136



 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+I  H     A    A  +     ++ H GFL  +G KMSKS GN +    L+
Sbjct: 260 IHVIGKDIIRFHAVYWPAFLMSA-GLPLPKRVFAH-GFLLNKGEKMSKSLGNVVDPFNLV 317

Query: 293 ETKKFGGRSWPAPVIRLAML 312
           E        +    IR   L
Sbjct: 318 E-------HFGLDQIRYFFL 330


>gi|126666689|ref|ZP_01737666.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628734|gb|EAZ99354.1| isoleucyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 939

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + +     +  H   ++ +G KMSKS GN I   E+            A ++RL +
Sbjct: 580 SIAINGVAPYKQVLTHGFTVDGKGYKMSKSLGNVIAPQEVTNDLG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  +   L ++     +   T+ 
Sbjct: 633 AATDYSGEMTVSKDILRQSADGYRRIRNTAR 663


>gi|94986597|ref|YP_594530.1| leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|122988802|sp|Q1MS17|SYL_LAWIP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94730846|emb|CAJ54208.1| Leucyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 835

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E  A + +  G +  +G KMSKS GN +  N+++         + A  IRL  L      
Sbjct: 570 EPFAKL-LTQGMVIKDGSKMSKSKGNIVDPNQMINI-------YGADTIRLFCLFAAPPE 621

Query: 318 EPIDFTVQRLTEAEILLSK 336
              D++   +  +   L +
Sbjct: 622 RDFDWSDSGIEGSYRFLHR 640



 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 31/97 (31%), Gaps = 10/97 (10%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           IDP+  + YV    P      H+G+ R   + DV+ R+ R       V +          
Sbjct: 30  IDPNKKKYYVLEMWPYPSGNIHMGHVRNYSIGDVIARIKRMQGYN--VLHPMGWDAFGLP 87

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
               A + H         +  T  N  +      RL 
Sbjct: 88  AELAAIKHHTQ------PADWTYTNINEMRAQLKRLG 118


>gi|163942754|ref|YP_001647638.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|229558040|sp|A9VP41|SYM_BACWK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|163864951|gb|ABY46010.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 544

 Score = 44.1 bits (103), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE         +  I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTVKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|320354487|ref|YP_004195826.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
 gi|320122989|gb|ADW18535.1| Isoleucyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
          Length = 935

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G+KMSKS GN +   ++++        + A V+RL +   +Y++ +  + + 
Sbjct: 591 HGYVVDGQGKKMSKSVGNVVAPQQVID-------QYGAEVLRLWVASENYQDDVKVSDEI 643

Query: 327 LTEAEILLSKWPQT 340
           L        K   T
Sbjct: 644 LKHVSDAYRKMRNT 657


>gi|297180037|gb|ADI16262.1| leucyl-tRNA synthetase [uncultured bacterium HF0010_16H03]
          Length = 756

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 42/114 (36%), Gaps = 15/114 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 D  E    + +  G +  +G KMSKS G
Sbjct: 462 PVDLYIGGIEHAILHLLYSRFFHKALRDMDMVDGNEPFKKL-LTQGMVLKDGTKMSKSKG 520

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK 336
           N +     +E        + A  +RL M+      + ++++   +  A   L K
Sbjct: 521 NTVDPQSYIE-------KYGADTVRLYMMFTAPPEQSLEWSESSVEGASRFLKK 567


>gi|219871152|ref|YP_002475527.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|219691356|gb|ACL32579.1| leucyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 862

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 54/156 (34%), Gaps = 48/156 (30%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           +H+G       KMSKS  N I   E++E        + A  +RL M+      P    ++
Sbjct: 614 VHSGM-----TKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLE 658

Query: 322 FTVQRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND-- 358
           +    +  A+  L +          S +   +DP                 ++ + +D  
Sbjct: 659 WQESGVEGAKRFLGRLWNLAYEYAQSPATVALDPTALSKEQKDLRRDVHKTIAKVSDDIG 718

Query: 359 ----LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
                NT  AI A+ +L  + TK   +     A   
Sbjct: 719 RRQTFNT--AIAAIMELMNKLTKAPLVNDQDKAVMA 752


>gi|206603843|gb|EDZ40323.1| Methionyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 673

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 9/74 (12%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    I+ H G+  + G KMSKS GN       ++  ++ G+ +    +R  +L  
Sbjct: 283 AMGLEPPRLIFAH-GWWTVNGEKMSKSRGN------AVDPIQYAGK-YGPDTLRYFLLRE 334

Query: 314 THYREPIDFTVQRL 327
             + +  DF+ + L
Sbjct: 335 GQFGQDADFSDKAL 348



 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 37/116 (31%), Gaps = 11/116 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R         +    TD         +    +   N 
Sbjct: 21  VNDIPHIGHAYTTVACDVLARTGRMSG---RPVFFLTGTD-----EHGQKVWQSAQKANL 72

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA 148
           +  I   +   +F      L         R T   HI  +  ++  +  +G  YE 
Sbjct: 73  SPQIYVDRIMPRFRDLWKTLLISNDDFV-RTTQPRHIRGVQSVLDRLWKNGEIYEG 127


>gi|253699409|ref|YP_003020598.1| leucyl-tRNA synthetase [Geobacter sp. M21]
 gi|259511544|sp|C6E100|SYL_GEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251774259|gb|ACT16840.1| leucyl-tRNA synthetase [Geobacter sp. M21]
          Length = 824

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E  +N+ +  G +  +G KMSKS GN +  N L+E        + A   RL  +      
Sbjct: 564 EPFSNL-LTQGMVIKDGAKMSKSKGNVVDPNALIER-------YGADTARLFSLFAAPPE 615

Query: 318 EPIDFTVQRLTEAEILLSK 336
           + +D++ Q +  +   L++
Sbjct: 616 KDLDWSDQGVDGSYRFLNR 634


>gi|168217640|ref|ZP_02643265.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380323|gb|EDT77802.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 514

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     +  D+L R  R    E  V +V         I+ +A++      IN +   +
Sbjct: 17  HIGRVSSWMAGDILARYHRAKGDE--VIFVSGSDCHGSPILNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R T+   H  Q+  +I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFDIFTR-TDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYC 125


>gi|242374048|ref|ZP_04819622.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
 gi|242348238|gb|EES39840.1| possible leucyl-tRNA synthetase [Staphylococcus epidermidis
           M23864:W1]
          Length = 368

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 87  PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 146

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 147 NVINPDDIVSSHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLIV 199

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
           T  G ++  ++ +                  D N +S   AI  L     +  K +++
Sbjct: 200 TEDGTLNNKIVDSNDKSLDKVYNQTVKKVTEDFNALSFNTAISQLMVFINDCYKANEI 257


>gi|300707853|ref|XP_002996120.1| hypothetical protein NCER_100842 [Nosema ceranae BRL01]
 gi|263511639|sp|C4V8L1|SYLC_NOSCE RecName: Full=Probable leucyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS
 gi|239605390|gb|EEQ82449.1| hypothetical protein NCER_100842 [Nosema ceranae BRL01]
          Length = 884

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    +         +        NG L L   KMSKS GNF++++
Sbjct: 519 PVDLRVSGKDLIKNHLLFFMFNHVALFDEKYWPKRIFTNGHLMLNKEKMSKSTGNFLSVD 578

Query: 290 ELL 292
           + L
Sbjct: 579 DAL 581


>gi|291288265|ref|YP_003505081.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
 gi|290885425|gb|ADD69125.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
          Length = 644

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 40/121 (33%), Gaps = 14/121 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  D + R  R    + C      +T  D+      + E  +     
Sbjct: 15  VNDVPHIGHAYTTVACDTISRYKRLCGFDVCF-----LTGTDEH---GQKIEQAAQKRGI 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
               +  +  Q+F      L         R T+ + +    ++ I       + N +I  
Sbjct: 67  TPKALADEVVQRFAGLWKILNISN-DKFIRTTDELHK--KAVRKIFDKM---KENGDIYL 120

Query: 155 D 155
           D
Sbjct: 121 D 121


>gi|169343242|ref|ZP_02864253.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169298540|gb|EDS80621.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 514

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     +  D+L R  R    E  V +V         I+ +A++      IN +   +
Sbjct: 17  HIGRVSSWMAGDILARYHRAKGDE--VIFVSGSDCHGSPILNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R T+   H  Q+  +I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFDIFTR-TDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYC 125


>gi|170730685|ref|YP_001776118.1| isoleucyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|254782457|sp|B0U3Q9|SYI_XYLFM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167965478|gb|ACA12488.1| isoleucyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D          H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDNAAPYKQCLTHGFTVDQHGRKMSKSLGNGIEPQDIIKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + + L        +   T+ 
Sbjct: 648 TDYSNEMSLSQEILKRTTDAYRRIRNTTR 676


>gi|71852743|gb|AAZ50766.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 795

 Score = 43.7 bits (102), Expect = 0.056,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 571 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 623

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 624 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 681

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 682 KLFSDYAKGFVQL-IAPFAPHLGEEL 706


>gi|325288845|ref|YP_004265026.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324964246|gb|ADY55025.1| Isoleucyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 924

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +  H   ++ +GRKMSKS GN +   +++       R   A ++RL +
Sbjct: 569 SVAAYGQAPYKTVLTHGFLVDEKGRKMSKSQGNGVDPLQVV-------RDMGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR  +  + + + +      K   T
Sbjct: 622 SSADYRNDVAASPRIMNQMVEAYRKIRNT 650


>gi|295399400|ref|ZP_06809382.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312110041|ref|YP_003988357.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978866|gb|EFG54462.1| valyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215142|gb|ADP73746.1| valyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 880

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGLEFTGKRPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 540 ID-------QYGADSLRFFLATGS--SPGQDLRFSTEKVEATWNFANKIWNASR 584


>gi|218883935|ref|YP_002428317.1| leucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
 gi|218765551|gb|ACL10950.1| leucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
          Length = 971

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 8/106 (7%)

Query: 13  RKITEFQAI-DPSNIRMYVCGPTVYDFA--HIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           R+   F+A  +P   + ++  P  Y  A  HIG+ R   + D++ R  R           
Sbjct: 22  RENRVFEANPEPGKPKYFITVPYPYSNAPLHIGHGRTYTIGDIIARYKRLKGYNVLYPMA 81

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
            +IT      +           +N   S       + +V D  ++ 
Sbjct: 82  FHITGTPVLAVSEMIARGDERVVNMYKS-----YIRYYVSDEGKVN 122



 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 18/161 (11%)

Query: 243 PHHENEIA----QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           PH  N ++            E    +   N  +  EG KMSKS GN I + ++       
Sbjct: 610 PHISNHLSFYIFHHVVIFPREHWPRMITLNETVIREGAKMSKSKGNVIPLRDI------- 662

Query: 299 GRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
            R + A + RL +         +D+  + +      L ++ +   ++  +         +
Sbjct: 663 ARLYSADLFRLYISWAAGLDSVLDWREKEVAIVIDSLKRFVEL--AENAVGAECRDNAGD 720

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIF----NASAHILGI 394
           D  +   +   H+L  +++ N + + I     NA  ++L +
Sbjct: 721 DAASRWFMDKFHQLISDASSNIEHMEIREYVQNAFFNVLSL 761


>gi|154686944|ref|YP_001422105.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154352795|gb|ABS74874.1| ValS [Bacillus amyloliquefaciens FZB42]
          Length = 880

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +     Y     D+   G D+IF      I Q           ++ IH    + 
Sbjct: 464 GWPDENAEDFKRY--YSTDVLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLIRDE 521

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEA 330
           +GRKMSKS GN +   ++++        + A  +R  +       P   + F+ +++   
Sbjct: 522 QGRKMSKSLGNGVDPMDVID-------KYGADSLRYFLATGS--SPGQDLRFSYEKVEST 572

Query: 331 EILLSK-WPQTSTSKGIIDPAVLSALY 356
               +K W  +  +   +D      L 
Sbjct: 573 WNFANKIWNASRFALMNMDGMTYDELD 599


>gi|57526927|ref|NP_001009637.1| leucyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
 gi|56388592|gb|AAH87655.1| Leucyl-tRNA synthetase [Rattus norvegicus]
          Length = 1178

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 43/136 (31%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKS 281
                D+   G DLI  H      N +A                  NG L L   KMSKS
Sbjct: 666 FWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRA---NGHLLLNSEKMSKS 722

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+T+++ ++        + A  +RL                 L +A   +       
Sbjct: 723 TGNFLTLSQAVD-------KFSADGMRL----------------ALADAGDTVE------ 753

Query: 342 TSKGIIDPAVLSALYN 357
                 D   + A+ +
Sbjct: 754 ------DANFVEAMAD 763


>gi|126460254|ref|YP_001056532.1| valyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126249975|gb|ABO09066.1| valyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 799

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 14/130 (10%)

Query: 33  PTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV--RNITDIDDKIIER---AR 84
           P  Y   +  HIG       FD++ R LR    +    +   RN   I+ ++ ++     
Sbjct: 43  PPPYLSSNRPHIGQTASYAHFDMIARFLRMRGVDVVFPFYLDRNGLPIEVQVEKKYGIVA 102

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII---- 140
            E P             +   +FV    R   L+  + P+ T+  P+   + Q       
Sbjct: 103 HEVPREQFIKLCKEELDRYEGEFVSSLRRWG-LSFDYWPQGTDS-PEYRRMTQKTFIDLW 160

Query: 141 LHGHAYEANN 150
             G  YEA  
Sbjct: 161 HRGLVYEAER 170


>gi|218893655|ref|YP_002442524.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|254244543|ref|ZP_04937865.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|254782427|sp|B7V0A3|SYI_PSEA8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126197921|gb|EAZ61984.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|218773883|emb|CAW29697.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +    +++T         A ++RL + 
Sbjct: 584 CAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLG-------ADILRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEIAVSQQILQRSADAYRRIRNTTR 666


>gi|2415551|emb|CAA04301.1| arginyl-tRNA synthetase [Campylobacter jejuni]
          Length = 97

 Score = 43.7 bits (102), Expect = 0.057,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
          PT     HIG+AR  +  D L RL R+   +    Y  N
Sbjct: 60 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 96


>gi|296391374|ref|ZP_06880849.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
 gi|313107205|ref|ZP_07793404.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310879906|gb|EFQ38500.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +    +++T         A ++RL + 
Sbjct: 584 CAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLG-------ADILRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEIAVSQQILQRSADAYRRIRNTTR 666


>gi|284931170|gb|ADC31108.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 597

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 15/155 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ D L R  +    +  V ++    +   KI  +A+       +N     
Sbjct: 30  PHIGHAYTTILGDFLARFKKQRGYD--VFFLSGTDEFGKKIETKAKS------LNLTPQK 81

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIF 154
           +  + + +F +    L     T   R T   P+   +++       L  + Y    + ++
Sbjct: 82  MVDQYSSKFKELFDLLNIEL-TRFVRTTE--PKHQEVVKKIFGLFYLKKYIYLDQWQGLY 138

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
                 NY + S  K  +    T +       +  
Sbjct: 139 CVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQL 173


>gi|187931682|ref|YP_001891666.1| leucyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|238691565|sp|B2SGM9|SYL_FRATM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|187712591|gb|ACD30888.1| leucyl-tRNA synthetase [Francisella tularensis subsp. mediasiatica
           FSC147]
          Length = 813

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 54/188 (28%), Gaps = 21/188 (11%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           RK   F+ I+ +   + Y      Y     H+G+ R   + DV+ R  +     K V + 
Sbjct: 18  RKNDTFKTIEDNTKEKFYCLSMLPYPSGTLHMGHVRNYTIGDVIARYQKMQG--KNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        A +         +    T  N          L       +  AT   
Sbjct: 76  MGWDAFGLPAENAAIKHKK------SPYEWTKSNIAYMRSQFDSLGFSFDWSREIATCDE 129

Query: 130 P----QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
                +  + IQ +   G AY  N+ +              +  ++ + +          
Sbjct: 130 DYYKWEQWFFIQ-LYKKGLAYRKNSVVNWDPVDQT----VLANEQVVDGRGWRSGALVEK 184

Query: 185 KKNPADFI 192
           K+ P  F+
Sbjct: 185 KEIPQWFL 192



 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 37/90 (41%), Gaps = 9/90 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +   EL++        + A  +RL  M      
Sbjct: 558 EPFKNL-LTQGMVLKDGAKMSKSKGNIVDPQELID-------KYGADTVRLFSMFAAPPE 609

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + ++++   +      L K    +    +I
Sbjct: 610 QSLEWSETGVEGTNKFLRKVFNYAELNKVI 639


>gi|239827910|ref|YP_002950534.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|239808203|gb|ACS25268.1| valyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 880

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDAQGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 540 ID-------QYGADSLRFFLATGS--SPGQDLRFSTEKVEATWNFANKIWNASR 584


>gi|254238692|ref|ZP_04932015.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126170623|gb|EAZ56134.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +    +++T         A ++RL + 
Sbjct: 584 CAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLG-------ADILRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEIAVSQQILQRSADAYRRIRNTTR 666


>gi|31544361|ref|NP_852939.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|31541205|gb|AAP56507.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930403|gb|ADC30342.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 590

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 15/155 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ D L R  +    +  V ++    +   KI  +A+       +N     
Sbjct: 30  PHIGHAYTTILGDFLARFKKQRGYD--VFFLSGTDEFGKKIETKAKS------LNLTPQK 81

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIF 154
           +  + + +F +    L     T   R T   P+   +++       L  + Y    + ++
Sbjct: 82  MVDQYSSKFKELFDLLNIEL-TRFVRTTE--PKHQEVVKKIFGLFYLKKYIYLDQWQGLY 138

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
                 NY + S  K  +    T +       +  
Sbjct: 139 CVDCEENYTTSSVLKKADLVEKTNLDLSMDPDDQL 173


>gi|161751096|ref|NP_376312.2| isoleucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|84029571|sp|Q975H9|SYI_SULTO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1047

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 29/178 (16%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---F 322
           +H   L+ +GR+M KS GN++  +++ E +K+G       V+RL +L        +   F
Sbjct: 583 VHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGR-----DVLRLWLLR---NTTWEDAKF 634

Query: 323 TVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
           + + L + +  L+       +  T  +    DP + +   ++L     I+ L  L+R + 
Sbjct: 635 SWKALDQTKRDLNIIWNVYVFASTYMNLDNFDPRIYN--LDNLKQYLRIEDLWLLSRYNR 692

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA---DYI 431
              ++    N            E  NK  S  I+ + +  L L++ + ++ +   D I
Sbjct: 693 VVKEVKESMNDF-------KVHELANKMTSFIIDDISRFYLRLVRKRAWNESNDPDKI 743


>gi|15599756|ref|NP_253250.1| isoleucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|81539849|sp|Q9HVM4|SYI_PSEAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|9950805|gb|AAG07948.1|AE004869_12 isoleucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +    +++T         A ++RL + 
Sbjct: 584 CAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLG-------ADILRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEIAVSQQILQRSADAYRRIRNTTR 666


>gi|107099777|ref|ZP_01363695.1| hypothetical protein PaerPA_01000795 [Pseudomonas aeruginosa PACS2]
          Length = 927

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +    +++T         A ++RL + 
Sbjct: 568 CAIDNHAPYRQLLTHGFTVDESGRKMSKSLGNTVVPQTVIDTLG-------ADILRLWVA 620

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 621 STDYSGEIAVSQQILQRSADAYRRIRNTTR 650


>gi|83954544|ref|ZP_00963255.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
 gi|83840828|gb|EAP79999.1| isoleucyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
          Length = 971

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 56/184 (30%), Gaps = 26/184 (14%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 625 QSVGTTGRAPYRNVVTHGFTLDEKGMKMSKSIGNTIVPEKVV-------QQYGADILRLW 677

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI----- 365
           +  T Y        + L        +   T             A   D    + +     
Sbjct: 678 VAQTDYTADQRIGPEILKGTADSYRRLRNTMRYMLGALSDFTDA---DRTEPADMPELER 734

Query: 366 ------QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI---EKLVQER 416
                   L ++ RE    +D   +F A      +++   + +          + L   R
Sbjct: 735 WVLHRVAELDQVVREGYARYDFQGVFQAVFTFATVDLSAFYFDVRKDALYCDGDTL--RR 792

Query: 417 LILL 420
               
Sbjct: 793 RAAR 796


>gi|269103423|ref|ZP_06156120.1| isoleucyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268163321|gb|EEZ41817.1| isoleucyl-tRNA synthetase [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 570 SVAMKDKAPYKQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 623 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 653


>gi|257482215|ref|ZP_05636256.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|330987613|gb|EGH85716.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331011322|gb|EGH91378.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|167038518|ref|YP_001666096.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|320116914|ref|YP_004187073.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|166857352|gb|ABY95760.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
           33223]
 gi|319930005|gb|ADV80690.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
          Length = 633

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 63/180 (35%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D           +G+L LEG KMSKS GN +   EL
Sbjct: 253 DVHLVGKEIMRFHTIIWPAMLMALDL--PLPKKVFGHGWLILEGGKMSKSKGNVVDPKEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK---WP 338
           +         +    +R  +L    +     F+ + L          +   LLS+     
Sbjct: 311 VS-------KYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMI 363

Query: 339 QTSTSKGIIDPAVLSALYNDL-NTV-----------------SAIQALHKLARESTKNHD 380
           +      +  P+    + +DL NT                  +A+  + KL R + K  D
Sbjct: 364 EKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423


>gi|170288577|ref|YP_001738815.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176080|gb|ACB09132.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 824

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N ++ +E++E        + A  +R+ +L M    +  +++   +      + +   T
Sbjct: 587 NVVSPDEMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFIKRLWNT 637



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 19/147 (12%)

Query: 14  KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
           K   +        + Y  V  P      H+G+ +  ++ D++ R  R           Y 
Sbjct: 20  KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGY- 78

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
               D      E A  E             T KN         +L       +  AT   
Sbjct: 79  ----DAFGLPAENAAIEK-----GIHPEEWTRKNINTIRGQVKKLGISYDWSREIAT-CD 128

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
            +     Q     +  +G AY+    +
Sbjct: 129 EEYYKWTQWIFLQLYKNGLAYKKKAAV 155


>gi|148269892|ref|YP_001244352.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|172047877|sp|A5IKQ3|SYL_THEP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147735436|gb|ABQ46776.1| leucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 824

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 528 PVDQYIGGVEHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N ++ +E++E        + A  +R+ +L M    +  +++   +      + +   T
Sbjct: 587 NVVSPDEMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFIKRLWNT 637



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 19/147 (12%)

Query: 14  KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
           K   +        + Y  V  P      H+G+ +  ++ D++ R  R           Y 
Sbjct: 20  KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGY- 78

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
               D      E A  E             T KN         +L       +  AT   
Sbjct: 79  ----DAFGLPAENAAIEK-----GIHPEEWTRKNINTIRGQVKKLGISYDWSREIAT-CD 128

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
            +     Q     +  +G AY+    +
Sbjct: 129 EEYYKWTQWIFLQLYKNGLAYKKKAAV 155


>gi|88607168|ref|YP_505281.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|109894971|sp|Q2GK20|SYR_ANAPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88598231|gb|ABD43701.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 580

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 56/333 (16%), Positives = 106/333 (31%), Gaps = 61/333 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI----------IER 82
           PT     HIG+AR  +  DVL  LL++   +    Y  N  D   ++           + 
Sbjct: 139 PT--GPLHIGHARGAVFGDVLSNLLKWVGYDVIKEYYVN--DAGSQVKTLVSSVFLRYKE 194

Query: 83  ARQE----HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
           A  E       +   + +  I     +++  D   L         R +  +  M+ LI+ 
Sbjct: 195 ALGEEITIGAGLYPGEYLKPIARDLVEKYGSDL--LNASDKDEIIR-SFTLSSMLNLIKE 251

Query: 139 IIL----HGHAYEANNEIIFD--TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
            +         + + +++           Y        +      +  ++  +  P   +
Sbjct: 252 DLALLGVEHDVFVSESDLQNRNVIEECVKYLRERGIIYEGVLEKPKREDELSEWQPRVQM 311

Query: 193 LWKRSTPMEPG----------WESPWGRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDL 240
           L+K +   +            W    G    G+H        H + + FD  I   G D 
Sbjct: 312 LFKSTEFGDDSDRALQKEDGTWSYFAGDI--GYH-------FHKISRGFDSMIMTLGFDH 362

Query: 241 IFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKFG 298
                  + A +  ++        ++    FL      KMSK  G F+T+ ++++     
Sbjct: 363 KGYVSRLKAAVAALSNGKASIDIKLYNLVNFLENGTPVKMSKRKGEFLTVRDVIDEVGR- 421

Query: 299 GRSWPAPVIRLAMLMTHYREP--IDFTVQRLTE 329
                  V R  ML    R    +DF   +  E
Sbjct: 422 ------DVARFMMLTR--RNDVVLDFDFAKARE 446


>gi|61657517|emb|CAI44428.1| leucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 843

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 547 PVDQYIGGVEHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 605

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N ++ +E++E        + A  +R+ +L M    +  +++   +      + +   T
Sbjct: 606 NVVSPDEMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFIKRLWNT 656



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 19/147 (12%)

Query: 14  KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
           K   +        + Y  V  P      H+G+ +  ++ D++ R  R           Y 
Sbjct: 39  KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGY- 97

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
               D      E A  E             T KN         +L       +  AT   
Sbjct: 98  ----DAFGLPAENAAIEK-----GIHPEEWTRKNINTIRGQVKKLGISYDWSREIAT-CD 147

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
            +     Q     +  +G AY+    +
Sbjct: 148 EEYYKWTQWIFLQLYKNGLAYKKKAAV 174


>gi|61657385|emb|CAI44301.1| leucyl-tRNA synthetase [Thermotoga petrophila]
          Length = 843

 Score = 43.7 bits (102), Expect = 0.058,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 15/118 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 547 PVDQYIGGVEHAVLHLLYSRFVTKVLHDLGYLNFDEPFTNLFT-QGMIYKDGAKMSKSKG 605

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           N ++ +E++E        + A  +R+ +L M    +  +++   +      + +   T
Sbjct: 606 NVVSPDEMIE-------KYGADTLRMYILFMAPPEKDAEWSDAGIEGVHRFIKRLWNT 656



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 19/147 (12%)

Query: 14  KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
           K   +        + Y  V  P      H+G+ +  ++ D++ R  R           Y 
Sbjct: 39  KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGYNVLHPFGY- 97

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
               D      E A  E             T KN         +L       +  AT   
Sbjct: 98  ----DAFGLPAENAAIEK-----GIHPEEWTRKNINTIRGQVKKLGISYDWSREIAT-CD 147

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
            +     Q     +  +G AY+    +
Sbjct: 148 EEYYKWTQWIFLQLYKNGLAYKKKAAV 174


>gi|330447396|ref|ZP_08311045.1| isoleucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328491587|dbj|GAA05542.1| isoleucyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 570 SVAMKDKAPYKQVLTHGFVVDGQGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 623 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 653


>gi|262067595|ref|ZP_06027207.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291378710|gb|EFE86228.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 640

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 58/334 (17%), Positives = 97/334 (29%), Gaps = 77/334 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +         +V  + +   K+ + A Q         
Sbjct: 17  VNGDPHVGSAYTTIAADVINRYNKAMG--MDTHFVTGLDEHGQKVEQAAEQNGF------ 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K T  F      L         R T   H   +  +++ +   G  Y+   + 
Sbjct: 69  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEERHKKAVKKILEIVHAKGDIYKGEYKG 127

Query: 153 IFDTS--------------SIPNYGS-FSRRKID----EQKMGTRVPEKYHKKNPADFIL 193
            +  S                P+ G   +  K +    +         K+  ++P DFIL
Sbjct: 128 KYCVSCETFFPENQLNGSNKCPDCGKELTVLKEESYFFKMSKYADALLKHIDEHP-DFIL 186

Query: 194 WKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYLG 228
                     +            + +  G P      HI            ++       
Sbjct: 187 PHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAGFENDD 246

Query: 229 KVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRKM 278
           K FD        +H  G D+I  H         C       K  +  + +G+   EG KM
Sbjct: 247 KKFDKFWNDARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKM 302

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           SKS GN +             + +     R  +L
Sbjct: 303 SKSKGNVV-------DPYNEIKKYGVDAFRYYLL 329


>gi|195109831|ref|XP_001999485.1| GI24536 [Drosophila mojavensis]
 gi|193916079|gb|EDW14946.1| GI24536 [Drosophila mojavensis]
          Length = 579

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 36/125 (28%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y +  V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYHRLRYPDTEVRLCTGTDEHGTKIQQAAAAHEVPV--GQ 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+++    + +              R T   H   +      +   G+ Y A    
Sbjct: 87  YCDEISAR----YREVFKAARIEYDDF-IRTTEQRHKLAVSDFWHRLQSRGYIYSAAYSG 141

Query: 153 IFDTS 157
            +  S
Sbjct: 142 WYCVS 146



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 13/72 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    + +H+ +  ++G+KMSKS  N +   E         + +    +R  +L  
Sbjct: 296 AAGLEPPRQLHVHSHW-TVDGQKMSKSKHNVVDPVEA-------AKQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT 323
              H     +F+
Sbjct: 348 GVAH--SDGNFS 357


>gi|171184685|ref|YP_001793604.1| leucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|229558039|sp|B1YAS9|SYL_THENV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|170933897|gb|ACB39158.1| leucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 945

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 78/205 (38%), Gaps = 39/205 (19%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         EK     + NG++  EG KMSKS  N + ++  +E  
Sbjct: 597 SGKDLIPNHLTFFIFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVLPLDRAVEM- 655

Query: 296 KFGGRSWPAPVIRLAM-LMTHYREPIDFTV-QRLTEAEILLS------KWPQTSTSKGI- 346
                 +    +R  + L     + +DF   +    A+ L+S      +  Q +  +   
Sbjct: 656 ------YGPDPLRATLALAAEVEQDLDFRDAEARRNAQQLMSIYTLAQRLVQGAEERPPT 709

Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
            +D  +++           I  + + ARE+   ++ + +  A+  +L       +  K +
Sbjct: 710 WVDQWLVAE----------ISRVLERAREA---YEKVRVRQAAVEVL-------YNAKAV 749

Query: 406 SIAIEKLVQE--RLILLKMKKFSSA 428
                 +V++  R  +   K ++ A
Sbjct: 750 FDQYLAMVEKPSRQAVEAAKAWAVA 774



 Score = 43.3 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 40/151 (26%), Gaps = 24/151 (15%)

Query: 13  RKITEFQAIDPSNIRMY---VCGPTVYDFAHIGNARPMIVFDVLYRLLRYY--------Y 61
           R+   F+      +  Y      P      HIG+ R  +V DV+ R  R+          
Sbjct: 20  REARVFEPEPAPGVPKYFITAAYPYPNGAIHIGHGRTYLVADVMARFQRHLGRSVLFPMG 79

Query: 62  GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK----NTQQFV-----KDTT 112
                T +  I ++     ++A  E            I          ++      +   
Sbjct: 80  FHYTGTPILTIAEVI-AAGDKAVMEEYMELYGVPEEEIKKMGDPLYLARYFHGQSKRAME 138

Query: 113 RLACLAPTHQPRATNHI-PQMIYLIQNIILH 142
           R          R    I P+    IQ     
Sbjct: 139 RFGLSID--WTREFTTIDPEYQRFIQWQFEK 167


>gi|319956864|ref|YP_004168127.1| valyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319419268|gb|ADV46378.1| valyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 877

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL--A 310
                     ++++H    + +G KMSKS GN I    +++        + A  +R   A
Sbjct: 513 EKLTGELPFPHVYLHALVKDEKGEKMSKSKGNVIDPLVMID-------KYSADALRFTLA 565

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           +L    R  I  + ++L ++    +K    +
Sbjct: 566 VLAVQGR-DIRLSEEKLEQSRNFTNKLYNAA 595


>gi|312867069|ref|ZP_07727279.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097198|gb|EFQ55432.1| valine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 883

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    S     Y   
Sbjct: 424 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVNSEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|229019973|ref|ZP_04176765.1| Leucyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|229026208|ref|ZP_04182570.1| Leucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228735092|gb|EEL85725.1| Leucyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228741322|gb|EEL91530.1| Leucyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 802

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQQLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIVASHG-------ADTLRLYEMFMGPLDASIAWSENGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLS 353
              G +   +  
Sbjct: 636 QENGELSEKITD 647


>gi|212223287|ref|YP_002306523.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|226695265|sp|B6YST9|SYL_THEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|212008244|gb|ACJ15626.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 967

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 8/121 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I       R          NGF  LEG+KMSKS GN +   
Sbjct: 603 PLDWRCSAKDLIPNHLTFFIFNHVAIFRKGHWPRGIAVNGFGTLEGQKMSKSKGNVLNFI 662

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++ +  +    D+  + + +    + ++ +  +     +
Sbjct: 663 DAIEENG-------ADVVRLYIMGLAEHDSDFDWRRKEVGKLRKQVERFYELVSEFASYE 715

Query: 349 P 349
            
Sbjct: 716 A 716



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 5/63 (7%)

Query: 16 TEFQA---IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
            F+      P   + Y+     Y     H+G+AR   + DV+ R  R            
Sbjct: 21 RVFEPDRNAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMAW 80

Query: 71 NIT 73
          +IT
Sbjct: 81 HIT 83


>gi|254468063|ref|ZP_05081469.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
 gi|207086873|gb|EDZ64156.1| leucyl-tRNA synthetase [beta proteobacterium KB13]
          Length = 805

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 44/178 (24%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       S            E   N+ +  G +  +G KMSKS G
Sbjct: 515 PVDQYIGGIEHAILHLLYSRFFSRLLRDEGLINISEPFRNL-LTQGMVLKDGSKMSKSKG 573

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWP---- 338
           N +   EL+E        + A   RL ++      + ++++ + +  +   L K      
Sbjct: 574 NTVDPGELIE-------KFGADTARLFIMFAAPADQSLEWSDKGIEGSHRFLKKVYTQIF 626

Query: 339 ----------QTSTSKGIIDPAV-------LSALYND------LNTVSAIQALHKLAR 373
                       +  +  ++          +  + +D       NT  AI +L +   
Sbjct: 627 NFKKILDGQNAFNLKESNLNNEFKFQLSKTIDKVTDDIDRRKSFNT--AIASLMEFVN 682


>gi|182415461|ref|YP_001820527.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842675|gb|ACB76927.1| methionyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 517

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 11/126 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   ++ DV+ R  R             +T  D+      + +  +  +  
Sbjct: 13  VNGSPHLGHAYEKVLTDVIARFRRQMGDRVHF-----LTGTDEH---GQKVQASARKLGI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F     +L         R T   H   +  ++Q +   G  Y+A  + 
Sbjct: 65  PPQQFADQVSAEFRALLPKLNISNDDF-IRTTEERHKRVVRDVLQRLFDKGEIYKAEYKG 123

Query: 153 IFDTSS 158
            + T  
Sbjct: 124 FYSTRQ 129


>gi|168213447|ref|ZP_02639072.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714987|gb|EDT27169.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 514

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     I  D+L R  R    E  V +V         I+ +A++      IN +   +
Sbjct: 17  HIGRVSSWIAGDILARYHRAKGDE--VIFVSGSDCHGSPILNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R T+   H  Q+  +I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFNIFTR-TDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYC 125


>gi|220926667|ref|YP_002501969.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219951274|gb|ACL61666.1| methionyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 515

 Score = 43.7 bits (102), Expect = 0.059,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 14/152 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   T     T  D+  ++    +  +     
Sbjct: 15  PNGAPHIGHAYEVIATDAIARFKRIDGYDVFFT-----TGTDEHGLK---IQQTAAKAGV 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                      +F      L C +     R T  +H+     L + +   G  Y +    
Sbjct: 67  TPRAFVDAMAPRFRAMAEALNC-SFDRFIRTTDPDHVAASQALWRRMEEAGDIYLSKYSG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +       Y   S   +     G R  E+  
Sbjct: 126 WYSVR-DEAYYDESELVLGPD--GVRCAERTG 154


>gi|311693403|gb|ADP96276.1| isoleucyl-tRNA synthetase [marine bacterium HP15]
          Length = 939

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + +     +  H   ++ +G KMSKS GN I   E++           A ++RL +
Sbjct: 580 SIAMNGVAPYRQVLTHGFTVDGKGHKMSKSLGNVIAPQEVMNELG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  +   L +      +   TS 
Sbjct: 633 AATDYSGEMTVSKDILRQTADGYRRIRNTSR 663


>gi|298492950|ref|YP_003723127.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234868|gb|ADI66004.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 533

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 59/352 (16%), Positives = 97/352 (27%), Gaps = 89/352 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R  R          V  +T  D+      + +  +  +  
Sbjct: 20  VNDVPHIGSAYTTMAADVVARFQRSLG-----HQVLLVTGTDEH---GQKIQRSAASLEK 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN--N 150
                  +    F+     L         R T  NH   +    Q +  +G  Y+     
Sbjct: 72  PPQEFCDQIVPSFINLWEVLNIQY-DRFSRTTALNHYAIVKEFFQRVWENGDIYQGQQKG 130

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
                             K         V  +  +     F L K  T +E  ++S    
Sbjct: 131 WYCVSCEEFKEERELLDGKRCPIHTSKEVEWRDEQNYF--FRLSKYQTKLEEFYQSSPDF 188

Query: 211 GRPG-------------------------WHIECSAMSSHYLGKVFDIHGGGL-DLIFPH 244
            +P                          W    S    H L   FD   G +  L+ P 
Sbjct: 189 IQPPSRRNEVLNFVGQGLQDFSISRVNLDWGFPVSVDPKHTLYVWFDALLGYVTALLEPD 248

Query: 245 HENEIAQSCCADRIEKT----------------ANIW---------------IHNGFLNL 273
                A++  A+ +EK                 A  W                 +GFL  
Sbjct: 249 -----AEATLANALEKWWPINLHLIGKDILRFHAVYWPAMLMSAGLPLPERVFGHGFLTK 303

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +G+KM K+ GN +             + + +  +R   L     + I+F   
Sbjct: 304 DGQKMGKTLGNTL-------DPISLVQRYGSDAVRYYFL-----KEIEFGKD 343


>gi|88657836|ref|YP_507350.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|109894990|sp|Q2GGT3|SYR_EHRCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|88599293|gb|ABD44762.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 576

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 63/337 (18%), Positives = 109/337 (32%), Gaps = 68/337 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII----------ER 82
           PT     HIG+AR  I  DVL  LL     +    Y  N  D   +I           + 
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLEKVGYQVVREYYIN--DAGTQIDVLVESVYLRYKE 189

Query: 83  ARQE--------HPSIPINDAISIITSKNTQQFVKD--TTRLACLAPTHQPRATNHIPQM 132
           A  +        +P + + +   ++  K     ++     ++  +         N I + 
Sbjct: 190 ATGQDIVIGSGLYPGLYLREIGKLLYEKYGTDLLEMSFVRKMKIIRDVSLEYLMNLIKED 249

Query: 133 IYL--IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           + L  I++ +    A    N I+     +          + EQ  GT +        P  
Sbjct: 250 LALLGIEHDVFTSEAELLKNNIVEKCVKLLEDKQLIYYGVLEQPKGTEMQN----WKPRT 305

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI- 249
            +L+K +   +   +    +    W          Y       H   +   F H   E+ 
Sbjct: 306 QMLFKSTDFGDDV-DRALQKVDGSW---------TYFANDIAYHFDKISRGFQHMILELG 355

Query: 250 -----------AQSCCADRIEKTANIWIHNGFLNLEGR---KMSKSNGNFITINELLETK 295
                      A          T +I +HN    L+     KMSK +G F+TI +++E  
Sbjct: 356 SDHIGYVKRLKAAVKALSNNNATVDIKLHNTVNFLDDGVQVKMSKRSGEFLTIRDVIEKV 415

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTE 329
                     V+R  ML    R+    +DF   ++ E
Sbjct: 416 GK-------DVVRFMMLT---RKSDVVLDFDFAKVVE 442


>gi|21230613|ref|NP_636530.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769391|ref|YP_244153.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|81304652|sp|Q4US40|SYI_XANC8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81795655|sp|Q8PBG6|SYI_XANCP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21112194|gb|AAM40454.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574723|gb|AAY50133.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 54/143 (37%), Gaps = 12/143 (8%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           + +    L K  D++  G D      ++ +      D++        H   ++  GRKMS
Sbjct: 561 AVLVDRGLPKPADLYLEGSDQHRGWFQSSLLTGVAMDKVAPYKQCLTHGFTVDEHGRKMS 620

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN I   E++       R+  A ++RL +    Y   +  + + L        +   
Sbjct: 621 KSLGNGIEPQEIM-------RTLGADILRLWIASADYSNEMSLSQEILKRNADAYRRLRN 673

Query: 340 TST----SKGIIDP-AVLSALYN 357
           T+     +    DP   L AL +
Sbjct: 674 TARFLLGNLHGFDPLQHLVALDD 696


>gi|68171671|ref|ZP_00545032.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67998906|gb|EAM85597.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 576

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 63/337 (18%), Positives = 109/337 (32%), Gaps = 68/337 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII----------ER 82
           PT     HIG+AR  I  DVL  LL     +    Y  N  D   +I           + 
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLEKVGYQVVREYYIN--DAGTQIDVLVESVYLRYKE 189

Query: 83  ARQE--------HPSIPINDAISIITSKNTQQFVKD--TTRLACLAPTHQPRATNHIPQM 132
           A  +        +P + + +   ++  K     ++     ++  +         N I + 
Sbjct: 190 ATGQDIVIGSGLYPGLYLREIGKLLYEKYGTDLLEMSFVRKMKIIRDVSLEYLMNLIKED 249

Query: 133 IYL--IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
           + L  I++ +    A    N I+     +          + EQ  GT +        P  
Sbjct: 250 LALLGIEHDVFTSEAELLKNNIVEKCVKLLEDKQLIYYGVLEQPKGTEMQN----WKPRT 305

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI- 249
            +L+K +   +   +    +    W          Y       H   +   F H   E+ 
Sbjct: 306 QMLFKSTDFGDDV-DRALQKVDGSW---------TYFANDIAYHFDKISRGFQHMILELG 355

Query: 250 -----------AQSCCADRIEKTANIWIHNGFLNLEGR---KMSKSNGNFITINELLETK 295
                      A          T +I +HN    L+     KMSK +G F+TI +++E  
Sbjct: 356 SDHIGYVKRLKAAVKALSNNNATVDIKLHNTVNFLDDGVQVKMSKRSGEFLTIRDVIEKV 415

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTE 329
                     V+R  ML    R+    +DF   ++ E
Sbjct: 416 GK-------DVVRFMMLT---RKSDVVLDFDFAKVVE 442


>gi|332976331|gb|EGK13187.1| isoleucine--tRNA ligase [Desmospora sp. 8437]
          Length = 931

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 8/128 (6%)

Query: 39  AHIGNARPMIVFDVLYRL--LRYYYGEKCVTYVRNITDIDDKIIERA---RQEHPSIPIN 93
            HIG+A   ++ D++ R   L+ +       Y  +   I+  +I +    R+E   + + 
Sbjct: 69  IHIGHAMNRVLKDMIIRFKSLQGFDTPYIPGYDTHGMPIEHAVITKKKLNRRELDPVKLR 128

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANN 150
           +           +      RL  L     P  T    +  + I +   ++  G+ Y+   
Sbjct: 129 EECREYALSFVNRQRDQFKRLGILGDWEHPYVTLAPRYEAKQIRIFGEMVKKGYVYQGYR 188

Query: 151 EIIFDTSS 158
            I +  SS
Sbjct: 189 SIYWSPSS 196



 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN I   ++++T       + A ++RL +
Sbjct: 577 AVATKGTAPYRQVLSHGFTLDGEGRKMSKSLGNTIDPLQVMKT-------YGADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 630 ASVDYQADVRVSEKILKQIAEVYRKIRNT 658


>gi|308174506|ref|YP_003921211.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607370|emb|CBI43741.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554425|gb|AEB24917.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328912829|gb|AEB64425.1| valyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 880

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 54/147 (36%), Gaps = 15/147 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +     Y     D+   G D+IF      I Q           ++ IH    + 
Sbjct: 464 GWPDENAEDFKRY--YSTDVLVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLIRDE 521

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEA 330
           +GRKMSKS GN +   ++++        + A  +R  +       P   + F+ +++   
Sbjct: 522 QGRKMSKSLGNGVDPMDVID-------KYGADSLRYFLATGS--SPGQDLRFSYEKVEST 572

Query: 331 EILLSK-WPQTSTSKGIIDPAVLSALY 356
               +K W  +  +   +D      L 
Sbjct: 573 WNFANKIWNASRFALMNMDGMTYDELD 599


>gi|298709583|emb|CBJ31409.1| Leucyl-tRNA Synthetase (C-terminal region) Leucyl-tRNA Synthetase
           (Central region) Leucyl-tRNA Synth [Ectocarpus
           siliculosus]
          Length = 1110

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+     DL+  H      N  +     DR E     +  NG + ++  KMSKS GNF
Sbjct: 714 PMDLRCSAKDLVPNHLTMALYNHASIWK--DRPELWPRGYFTNGHVQVDAMKMSKSKGNF 771

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           + +++ +       + + A   R A+
Sbjct: 772 LMMDDCV-------KRFGADATRFAL 790


>gi|255660428|ref|ZP_05405837.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 757

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 20/167 (11%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               + IH    + + RKMSKS  N I   +L+       R++ A  +RL +   H   P
Sbjct: 497 PFKTVLIHGLVRDEQNRKMSKSLNNGIDPVDLI-------RNYGADAVRLFLCSNH--TP 547

Query: 320 ID---FTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVS--AIQALHKLAR 373
            D   F+ Q++  A   L+K W  T     + +   +S   + L+      +  L K+ +
Sbjct: 548 GDDLIFSEQKIKSAWNFLNKLWNVTKFVIQLENDQEISYDLDKLSLSETWILAKLDKVIQ 607

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           + TK  D       +  IL     K   +   +  IE + +E   L 
Sbjct: 608 KITKLLDKF-QLALANQIL----VKFVWDDFCNTFIEAIKKEPNQLK 649


>gi|119946877|ref|YP_944557.1| isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166229761|sp|A1SZP3|SYI_PSYIN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|119865481|gb|ABM04958.1| Isoleucyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 944

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++  G+KMSKS GN ++   ++           A ++RL +
Sbjct: 584 SMAINNKAPYKEVLTHGFVVDGNGKKMSKSLGNVMSPQTVMNNLG-------ADILRLWV 636

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   TS 
Sbjct: 637 ASTDYTGEMTVSDEILNRSADSYRRIRNTSR 667


>gi|37360338|dbj|BAC98147.1| mKIAA1352 protein [Mus musculus]
          Length = 1210

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 43/136 (31%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKS 281
                D+   G DLI  H      N +A                  NG L L   KMSKS
Sbjct: 698 FWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRA---NGHLLLNSEKMSKS 754

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+T+++ ++        + A  +RL                 L +A   +       
Sbjct: 755 TGNFLTLSQAVD-------KFSADGMRL----------------ALADAGDTVE------ 785

Query: 342 TSKGIIDPAVLSALYN 357
                 D   + A+ +
Sbjct: 786 ------DANFVEAMAD 795


>gi|12045191|ref|NP_073002.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351181|sp|P47576|SYV_MYCGE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3844913|gb|AAC71557.1| valyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078837|gb|ABY79455.1| valyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 837

 Score = 43.7 bits (102), Expect = 0.060,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 20/167 (11%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               + IH    + + RKMSKS  N I   +L+       R++ A  +RL +   H   P
Sbjct: 497 PFKTVLIHGLVRDEQNRKMSKSLNNGIDPVDLI-------RNYGADAVRLFLCSNH--TP 547

Query: 320 ID---FTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVS--AIQALHKLAR 373
            D   F+ Q++  A   L+K W  T     + +   +S   + L+      +  L K+ +
Sbjct: 548 GDDLIFSEQKIKSAWNFLNKLWNVTKFVIQLENDQEISYDLDKLSLSETWILAKLDKVIQ 607

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           + TK  D       +  IL     K   +   +  IE + +E   L 
Sbjct: 608 KITKLLDKF-QLALANQIL----VKFVWDDFCNTFIEAIKKEPNQLK 649


>gi|229032112|ref|ZP_04188090.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
 gi|228729202|gb|EEL80200.1| Valyl-tRNA synthetase [Bacillus cereus AH1271]
          Length = 867

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 419 GTEEPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|224373503|ref|YP_002607875.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588740|gb|ACM92476.1| leucyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 819

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 16/131 (12%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKM 278
            Y     D + GG++    H       +     +      E    + +  G +  +G KM
Sbjct: 531 KYF-APVDQYIGGIEHAILHLLYARFFTKALRDLGYLELDEPFKKL-LTQGMVLKDGSKM 588

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           SKS GN +  +E++         + A   RL +L      + ++++   +  A   +++ 
Sbjct: 589 SKSKGNVVDPDEIVA-------KYGADTARLFILFAAPPEQELEWSDSAVEGAFRFINRL 641

Query: 338 PQTSTSKGIID 348
              +      D
Sbjct: 642 YLNAEKAYKTD 652


>gi|153839838|ref|ZP_01992505.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
 gi|149746645|gb|EDM57633.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
          Length = 499

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L+
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLD 353

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 354 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 398

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++          ++    + +  +L         I  I    + 
Sbjct: 399 SRNAGFIAKRFEGKLSDNFAEPELY---NEFVAAADRIAELFEAREFGRAIREITALADK 455

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 456 ANQYVDE 462


>gi|153952342|ref|YP_001397729.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|166232773|sp|A7H2J9|SYR_CAMJD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152939788|gb|ABS44529.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 530

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  + L RL R+   +    Y  N  D  ++I         S+  
Sbjct: 115 PT--GPLHIGHARGAVFGNTLTRLARHLGYKFDTEYYVN--DAGNQIYLLGLSILLSVKE 170

Query: 93  NDAISII---TSKNTQQFVKDTTR 113
           N     +         +++ D  +
Sbjct: 171 NILHENVEYPEQYYKGEYIADLAK 194


>gi|120537241|ref|NP_598898.2| leucyl-tRNA synthetase, cytoplasmic [Mus musculus]
 gi|48428640|sp|Q8BMJ2|SYLC_MOUSE RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|30931062|gb|AAH52715.1| Leucyl-tRNA synthetase [Mus musculus]
 gi|74184856|dbj|BAE39051.1| unnamed protein product [Mus musculus]
 gi|148678092|gb|EDL10039.1| mCG127948 [Mus musculus]
          Length = 1178

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 43/136 (31%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKS 281
                D+   G DLI  H      N +A                  NG L L   KMSKS
Sbjct: 666 FWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRA---NGHLLLNSEKMSKS 722

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+T+++ ++        + A  +RL                 L +A   +       
Sbjct: 723 TGNFLTLSQAVD-------KFSADGMRL----------------ALADAGDTVE------ 753

Query: 342 TSKGIIDPAVLSALYN 357
                 D   + A+ +
Sbjct: 754 ------DANFVEAMAD 763


>gi|322517283|ref|ZP_08070160.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|322124113|gb|EFX95652.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 901

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    +     Y   
Sbjct: 442 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPT 492

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 493 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPM 550

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 551 DVIE-------KYGADALRWFLSNGSAP-GQDMRFSYEKMDASWNFINKI 592


>gi|322375668|ref|ZP_08050180.1| isoleucine--tRNA ligase [Streptococcus sp. C300]
 gi|321279376|gb|EFX56417.1| isoleucine--tRNA ligase [Streptococcus sp. C300]
          Length = 926

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|322389020|ref|ZP_08062590.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
 gi|321144325|gb|EFX39733.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++ +N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYENFEFLTIYKALVNFINVDLSAFYLD 722


>gi|320322691|gb|EFW78784.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|313679972|ref|YP_004057711.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
 gi|313152687|gb|ADR36538.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
          Length = 626

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I  D L R  R    +   T+    TD   + I +A           
Sbjct: 14  VNARPHIGHAYTTINADFLARWHRLDGYD---TFFLTGTDEHGEKIAQAA-----ERAGK 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  +  ++F K    L         R T   H   +   +Q I   G  Y    E 
Sbjct: 66  PPQQFVDEVAEEFKKAWEVLHISYDDF-IRTTEPRHKKVVQRYLQEIYDRGDIYYGEYEG 124

Query: 153 IFDT 156
           ++  
Sbjct: 125 LYCV 128



 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 7/45 (15%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            G L  +GRKMSKS GN I             R +    +R  +L
Sbjct: 287 GGHLLADGRKMSKSLGNVI-------DPFEWARKYGPDAVRYYLL 324


>gi|258645206|ref|ZP_05732675.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260402556|gb|EEW96103.1| leucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 829

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 60/176 (34%), Gaps = 41/176 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEI-----AQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           Q     D  E   N+ +  G +  +G KMSKS G
Sbjct: 537 PVDQYIGGIEHAILHLLYSRFFMKVLQDEGMVDYPEPFTNL-LCQGMVLKDGGKMSKSVG 595

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N ++  E++         + A   RL +L      + ++++ Q +  +   L +      
Sbjct: 596 NVVSPEEIVG-------KYGADTARLFILFAAPPEKDLEWSDQGVEGSYRFLKRVWTIVG 648

Query: 343 SKGIIDPAV------------------LSALYND------LNTVSAIQALHKLARE 374
               +   +                  ++ +  D       NT  AI A+ +L  E
Sbjct: 649 KYQELGKELKGMLSPDEVALRRRLHQSIAKVTEDLDGKFAFNT--AISAIMELVNE 702


>gi|148270551|ref|YP_001245011.1| isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
 gi|166229777|sp|A5IML2|SYI_THEP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|147736095|gb|ABQ47435.1| Isoleucyl-tRNA synthetase [Thermotoga petrophila RKU-1]
          Length = 919

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 13/157 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D++  G D       + I  +           +  H    + +GRKMSKS GN +   
Sbjct: 547 PLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKEVLTHGFIKDEQGRKMSKSLGNVVDPM 606

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKG 345
           E++E        + A ++RL +  + Y   I  +++ + +   +  K   T      +  
Sbjct: 607 EVVE-------KYGAEILRLWLASSDYFNDIKISMRIVEQQTEVYRKIRNTFRFLLGNLE 659

Query: 346 IIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
             DP +    Y  L T+   A+  L ++ + +T+ +D
Sbjct: 660 GFDPELDRVPYEKLLTIDRWALGRLQEIIKRATEYYD 696


>gi|119505895|ref|ZP_01627959.1| Isoleucyl-tRNA synthetase, class Ia [marine gamma proteobacterium
           HTCC2080]
 gi|119458276|gb|EAW39387.1| Isoleucyl-tRNA synthetase, class Ia [marine gamma proteobacterium
           HTCC2080]
          Length = 934

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A       ++  H   ++ EGRKMSKS GN I   + +           A ++RL +  +
Sbjct: 577 AFGEAPYRSVLTHGFTVDGEGRKMSKSLGNIIPAKKAMNDLG-------ADILRLWVASS 629

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST 342
            YR  I  + +          +   TS 
Sbjct: 630 DYRNEIAASDEIFKRTSDAYRRIRNTSR 657


>gi|94501195|ref|ZP_01307717.1| isoleucyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426622|gb|EAT11608.1| isoleucyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 966

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +  H   ++ EG+KMSKS GN ++  +++           A ++RL +
Sbjct: 605 SVGARGKAPYKTVLTHGFTVDGEGKKMSKSLGNVVSPQDVVNKLG-------ADILRLWV 657

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L        +   T+ 
Sbjct: 658 AATDYSGEMTVSDEILKRTADSYRRIRNTTR 688


>gi|91794074|ref|YP_563725.1| isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91716076|gb|ABE56002.1| Isoleucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S   +       +  H   ++ +GRKMSKS GN
Sbjct: 556 EFHGHEVDLYLEGSDQHRGWFMSSLMISTAMNGKAPYKQVLTHGFTVDGKGRKMSKSVGN 615

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I    +            A ++RL +  T Y   +  + + L  +     +   T+ 
Sbjct: 616 VIAPLHVTNKLG-------ADILRLWVAATDYSGEMTVSDEILNRSADAYRRIRNTAR 666


>gi|78357338|ref|YP_388787.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|109894988|sp|Q30Z04|SYR_DESDG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|78219743|gb|ABB39092.1| arginyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 551

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 51/318 (16%), Positives = 101/318 (31%), Gaps = 46/318 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D L R++R+   E    Y  N       ++  +         
Sbjct: 127 PT--GPLHIGHGRGAAIGDSLARMMRFAGFETSTEYYINDAGRQMLLLGASVYYRAKQIK 184

Query: 93  NDAISIITSKNTQQFVKDTTR--LACLA-----PTHQPRATN---HIPQMIYLIQNIILH 142
              ++         +++D     L         P  +  A      +  ++  I+  +  
Sbjct: 185 GLDVAEPEEYYRGDYIRDIASEVLGFTPDLLEKPEEEALAVCQKYAVDTIMAGIRQDLAD 244

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
              +  ++++ F   S+   G+   +  D  +      E+          LW R+T    
Sbjct: 245 ---FSVSHDVWFSEKSLVETGAV-DKTFDRLRRSGLAYEEDG-------ALWFRTTDFGD 293

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI-----FPHHENEIAQSCCADR 257
             +      +   ++   A    Y    +D    G DL        HH            
Sbjct: 294 --DKNRVLKKSNGYLTYFASDIAYHDNKYD---RGFDLCVDIWGADHHGYVPRMRAAVQA 348

Query: 258 IEKTANIW--IHNGFLNL--EGRK--MSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           + K A+ +  I    +NL   G +  MS   G F T+ +++       +   A   R   
Sbjct: 349 LGKPADSFDVILVQLVNLLRNGEQVAMSTRAGEFETLADVV-------KEVGADAARFMF 401

Query: 312 LMTHYREPIDFTVQRLTE 329
           L       +DF ++ + +
Sbjct: 402 LSRKSDSSLDFDLELVKQ 419


>gi|21909670|ref|NP_663938.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895049|ref|NP_801399.1| leucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|32171567|sp|Q8K8S1|SYL_STRP3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21903853|gb|AAM78741.1| putative putative leucyl-tRNA synthetase [Streptococcus pyogenes
           MGAS315]
 gi|28810294|dbj|BAC63232.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|77406180|ref|ZP_00783251.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|77175220|gb|EAO78018.1| valyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 883

 Score = 43.7 bits (102), Expect = 0.061,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|327461992|gb|EGF08321.1| valine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 883

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 12/126 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW    SA    Y      +   G D+IF      I QS      +   N+ IH    + 
Sbjct: 459 GWPDVDSADFKRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   ++++        + A  +R  +        + + F+ +++  + 
Sbjct: 517 EGRKMSKSLGNGIDPMDVID-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 568

Query: 332 ILLSKW 337
             ++K 
Sbjct: 569 NFINKI 574


>gi|319744516|gb|EFV96871.1| valine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 883

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|289625790|ref|ZP_06458744.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867186|gb|EGH01895.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
 gi|330871074|gb|EGH05783.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|226939543|ref|YP_002794616.1| Syi [Laribacter hongkongensis HLHK9]
 gi|259511507|sp|C1DCX2|SYI_LARHH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226714469|gb|ACO73607.1| Syi [Laribacter hongkongensis HLHK9]
          Length = 957

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 66/196 (33%), Gaps = 25/196 (12%)

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILW-KRSTPMEPGWESP--WGRGRPGWHIECSAMSS 224
           RK++EQ +         +    D   + K    ++  ++S         G H E  A  +
Sbjct: 530 RKVEEQGINAWFELDPAELLGEDAARFDKMKDTLDVWFDSGTTHFHVLRGTHAEQLAYPA 589

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
               +  D H G          + +   C  D       +  H   ++ +GRKMSKS GN
Sbjct: 590 DLYLEGSDQHRGWFH-------SSLLTGCALDGRAPYNQLLTHGFVVDGQGRKMSKSVGN 642

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
            I   ++ ++         A ++RL +  T Y   +  +   L        +   T    
Sbjct: 643 VIAPQKINDSLG-------ADILRLWVASTDYSGELAISDTILKGTTDSYRRLRNTIR-- 693

Query: 345 GIIDPAVLSALYNDLN 360
                  L A  +D N
Sbjct: 694 ------FLLANLSDFN 703


>gi|76786857|ref|YP_329179.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|90108440|sp|Q3K2S4|SYV_STRA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|76561914|gb|ABA44498.1| valyl-tRNA synthetase [Streptococcus agalactiae A909]
          Length = 884

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|22536625|ref|NP_687476.1| valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76797752|ref|ZP_00780019.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|81455031|sp|Q8E1B5|SYV_STRA5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|22533463|gb|AAM99348.1|AE014212_7 valyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76586900|gb|EAO63391.1| valyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
          Length = 883

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|298488998|ref|ZP_07007021.1| Leucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
 gi|298156496|gb|EFH97593.1| Leucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi NCPPB
           3335]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|170289257|ref|YP_001739495.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
 gi|170176760|gb|ACB09812.1| isoleucyl-tRNA synthetase [Thermotoga sp. RQ2]
          Length = 920

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 13/157 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D++  G D       + I  +           +  H    + +GRKMSKS GN +   
Sbjct: 548 PLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKEVLTHGFIKDEQGRKMSKSLGNVVDPM 607

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKG 345
           E++E        + A ++RL +  + Y   I  +++ + +   +  K   T      +  
Sbjct: 608 EVVE-------KYGAEILRLWLASSDYFNDIKISMRIVEQQTEVYRKIRNTFRFLLGNLE 660

Query: 346 IIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
             DP +    Y  L T+   A+  L ++ + +T+ +D
Sbjct: 661 GFDPELDRVPYEKLLTIDRWALGRLQEIIKRATEYYD 697


>gi|92114464|ref|YP_574392.1| leucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
 gi|123387387|sp|Q1QV15|SYL_CHRSD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91797554|gb|ABE59693.1| leucyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
          Length = 856

 Score = 43.7 bits (102), Expect = 0.062,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 45/156 (28%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    +++        + A  +RL M+      + ++++   +  A   L
Sbjct: 614 EKMSKSKNNGVDPQAMIDR-------FGADTVRLFMMFAAPPEQSLEWSDSGVEGAHRFL 666

Query: 335 SK-WPQTSTSKGIIDPAVL--SALYND------------------------LNTVSAIQA 367
            + W   +       PA L   AL +D                         NT  AI A
Sbjct: 667 KRLWKLVADHLDAGTPAALDADALNDDQKTLRRKTHETIAKASDDIGRRTTFNT--AIAA 724

Query: 368 LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           + +L     +  D  P         G+ V +E L  
Sbjct: 725 VMELVNAIGRFEDTSPQ--------GLAVTREALEA 752


>gi|330960154|gb|EGH60414.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|291556883|emb|CBL34000.1| methionyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
          Length = 642

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 13/125 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    +  D + R  R    +     V  +T  D+      + E  +         
Sbjct: 18  PHIGHCYTTVACDTIARFKRMQGYD-----VMFLTGTDEH---GQKIELKAAEKGVTPKE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NNEIIF 154
              +    F +    +         R T+  HI  +  + + +   G+ Y+     +   
Sbjct: 70  YVDEIVANFKRLWETMHISY-DRFIRTTDDYHIETVQKIFKKLYEKGYIYKGTYKGKYCT 128

Query: 155 DTSSI 159
              S 
Sbjct: 129 PCESF 133



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 14/99 (14%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYRE 318
                   +G++N  G KMSKS GN +    L E        +    +R  +L    Y  
Sbjct: 279 PLPKHLYGHGWINFNGDKMSKSKGNVVDPFVLCER-------YGVDAVRYQILRDMPYGS 331

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
             +FT + +      L++      +      +   A+ +
Sbjct: 332 DCNFTNELM------LTRINADLANDLGNLVSRTVAMAD 364


>gi|291402374|ref|XP_002717549.1| PREDICTED: mitochondrial isoleucine tRNA synthetase [Oryctolagus
           cuniculus]
          Length = 1012

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 2/92 (2%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIR 308
            S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R
Sbjct: 638 ISAAARKKAPFKTVVVHGFTLGEKGEKMSKSLGNVINPDIVINGGQDQNKEPPYGADVLR 697

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             +  ++    +      L+ A   +SK   T
Sbjct: 698 WWVAESNVFTEVTIGPSALSAARDDISKLRNT 729


>gi|289648425|ref|ZP_06479768.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|158423799|ref|YP_001525091.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158330688|dbj|BAF88173.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 526

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 39/126 (30%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   I  D + R  R    +     VR +T  D+  I+       +         
Sbjct: 26  PHMGHAYEAIATDCIARFKRLDGYD-----VRFLTGTDEHGIK---MLQTAQKAGLTPRE 77

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N   F         L+     R T   HI     + + +   G  Y++     +  
Sbjct: 78  LLDRNVPAFKAMGPAFN-LSNDDFIRTTEERHIKSSQAIWERMAAKGDIYKSTYSGWYSV 136

Query: 157 SSIPNY 162
                Y
Sbjct: 137 RDEAYY 142



 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  +E    ++ H GFL   G KMSKS GN +    L
Sbjct: 265 DLHVIGKDIIRFHAVYWPAFLWSA-GLEPPKRVFGH-GFLFNRGEKMSKSVGNVVDPFGL 322

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +ET       +     R   L
Sbjct: 323 VET-------YGVDATRYFFL 336


>gi|71736375|ref|YP_276510.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123733881|sp|Q48DN1|SYL_PSE14 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71556928|gb|AAZ36139.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|26340206|dbj|BAC33766.1| unnamed protein product [Mus musculus]
          Length = 1178

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 43/136 (31%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKS 281
                D+   G DLI  H      N +A                  NG L L   KMSKS
Sbjct: 666 FWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRA---NGHLLLNSEKMSKS 722

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+T+++ ++        + A  +RL                 L +A   +       
Sbjct: 723 TGNFLTLSQAVD-------KFSADGMRL----------------ALADAGDTVE------ 753

Query: 342 TSKGIIDPAVLSALYN 357
                 D   + A+ +
Sbjct: 754 ------DANFVEAMAD 763


>gi|331265959|ref|YP_004325589.1| isoleucyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682631|emb|CBZ00248.1| isoleucyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|307720328|ref|YP_003891468.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306978421|gb|ADN08456.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 531

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-DIDDKIIERARQEHPSIP 91
           PT     HIG+AR  +  D LYR+ ++   +    Y  N   +  D +    +       
Sbjct: 114 PT--GPLHIGHARGAVYGDTLYRMAKHLGYDITAEYYVNDAGNQIDLLGLSIQLHARDNL 171

Query: 92  INDAISIITSKNTQQFVKDTTR 113
           +++ +    S    +++    R
Sbjct: 172 LDETVEYPESYYRGEYLDALAR 193


>gi|188992578|ref|YP_001904588.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|254782455|sp|B0RY28|SYI_XANCB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|167734338|emb|CAP52548.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 12/109 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D++        H   ++  GRKMSKS GN I   E++       R+  A ++RL +  
Sbjct: 595 AMDKVAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQEIM-------RTLGADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDP-AVLSALYN 357
             Y   +  + + L        +   T+     +    DP   L AL +
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTARFLLGNLHGFDPLQHLVALDD 696


>gi|126695598|ref|YP_001090484.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
 gi|166229753|sp|A3PAV8|SYI_PROM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|126542641|gb|ABO16883.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
          Length = 968

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 65/174 (37%), Gaps = 14/174 (8%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           +  +   +PE Y K++     LWK+    M+  ++S        W   C       L   
Sbjct: 528 DWDVKNLLPENYAKESD----LWKKGKDTMDVWFDSG-----SSWAAVCE--LRSELKYP 576

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            D++  G D      ++ +  S   +       +  H   L+  GRKMSKS GN +  N 
Sbjct: 577 ADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNI 636

Query: 291 LLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++     K    ++ A V+RL +    Y   +      L +   +  K   T+ 
Sbjct: 637 IINGGNNKKTDPAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTAR 690


>gi|90407186|ref|ZP_01215374.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90311762|gb|EAS39859.1| isoleucyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 944

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 7/112 (6%)

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            D++  G D      ++ +  S           +  H   ++ +G+KMSKS GN ++   
Sbjct: 563 IDLYLEGSDQHRGWFQSSLMTSMAIKNKAPYKEVLTHGFVVDGDGKKMSKSIGNVMSPQV 622

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++           A V+RL +  T Y   I  + + L  +     +   T+ 
Sbjct: 623 VMNNLG-------ADVLRLWVASTDYTGEITVSDEILNRSADSYRRIRNTAR 667


>gi|10435812|dbj|BAB14674.1| unnamed protein product [Homo sapiens]
          Length = 928

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 416 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 473

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 474 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 503

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 504 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 536


>gi|20094335|ref|NP_614182.1| isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|74560178|sp|Q8TWY2|SYI_METKA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19887391|gb|AAM02112.1| Isoleucyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 1080

 Score = 43.7 bits (102), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 43/93 (46%), Gaps = 16/93 (17%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH--YREPIDFT 323
           +H   L+ EGRKMSKS GN +   +++E        + A  +R  +L ++  +R  + F+
Sbjct: 617 MHGFTLDEEGRKMSKSLGNVVDPMDVVE-------KYGADTLRWYVLRSNAPWR-DMHFS 668

Query: 324 VQRLTEAEILLS------KWPQTSTSKGIIDPA 350
            Q + +    L+      ++ +  +     DP 
Sbjct: 669 WQDVRDTHRALNVLWNAYRFTKMYSELDEFDPE 701


>gi|332201532|gb|EGJ15602.1| tRNA synthetases class I family protein [Streptococcus pneumoniae
           GA47368]
          Length = 343

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     HIG+A  ++  D+L R  R    E  V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGTPISIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +E      N ++  I     ++F +   +L 
Sbjct: 60  KE------NKSVKEIADFYHKEFKETFEKLG 84


>gi|330887935|gb|EGH20596.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. mori str. 301020]
          Length = 497

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|315613567|ref|ZP_07888474.1| isoleucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315314258|gb|EFU62303.1| isoleucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|296876951|ref|ZP_06900995.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
 gi|296431986|gb|EFH17789.1| isoleucine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++ +N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYENFEFLTIYKALVNFINVDLSAFYLD 722


>gi|281412859|ref|YP_003346938.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
 gi|281373962|gb|ADA67524.1| isoleucyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
          Length = 919

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 63/157 (40%), Gaps = 13/157 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D++  G D       + I  +           +  H    + +GRKMSKS GN +   
Sbjct: 547 PLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKEVLTHGFIKDEQGRKMSKSLGNVVDPM 606

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKG 345
           E++E        + A ++RL +  + Y   I  +++ + +   +  K   T      +  
Sbjct: 607 EVVE-------KYGAEILRLWLASSDYFNDIKISMRIVEQQTEVYRKIRNTFRFLLGNLE 659

Query: 346 IIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
             DP +    Y  L T+   A+  L ++ + +T+ +D
Sbjct: 660 GFDPELDRVPYEKLLTIDRWALGRLQEIIKRATEYYD 696


>gi|241203365|ref|YP_002974461.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857255|gb|ACS54922.1| tRNA synthetase class I (M) [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 514

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 9/67 (13%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE--PIDFT 323
           + +G++ ++G+K+ KS GN I    ++++            +R  +L  H R     DF+
Sbjct: 288 LVHGYVTVDGKKIGKSAGNGIDPERIIQSYA------TPDALRYYLLR-HIRSADDGDFS 340

Query: 324 VQRLTEA 330
            +RL  A
Sbjct: 341 AERLEAA 347


>gi|25010562|ref|NP_734957.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457458|sp|Q8E6S0|SYV_STRA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|23094915|emb|CAD46136.1| valyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 884

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|77412415|ref|ZP_00788722.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161529|gb|EAO72533.1| valyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 884

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|218885863|ref|YP_002435184.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
 gi|218756817|gb|ACL07716.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
           F']
          Length = 657

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D L R  R     K   ++    +  DKI++ A +         
Sbjct: 13  VNAKPHLGHAYTTIVADSLRRFHRLLG--KDTYFLTGTDEHGDKIVQAAEK------AGC 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN--N 150
           +        + QF      L         R T   H   +  ++Q +   G  Y      
Sbjct: 65  SPQEFVDGVSTQFRDLWPHLGVEY-DQFIRTTDAEHKKCVQDVLQKVYDSGDIYFGEYGG 123

Query: 151 EIIFDTSSI 159
              +     
Sbjct: 124 HYCYGCERF 132



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 36/95 (37%), Gaps = 10/95 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H    D++ PH          A  +E   N+ +H  +L +   KMSKS GN +    +++
Sbjct: 255 HLVAKDILKPHAVFWPTMLKAA-GLEPYNNLNVHGYWL-VRDTKMSKSLGNVVDPLSMID 312

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
                   +     R  +L   H+     F+   L
Sbjct: 313 -------KYGLSAFRYFLLREMHFGSDASFSEDAL 340


>gi|26553840|ref|NP_757774.1| leucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
 gi|29336535|sp|Q8EW18|SYL_MYCPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|26453847|dbj|BAC44178.1| leucyl-tRNA synthetase [Mycoplasma penetrans HF-2]
          Length = 799

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 14/89 (15%)

Query: 230 VFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H          + Q       E    I I+ G + + G KMSKS G
Sbjct: 523 PVDIYIGGQEHAVLHLLYARFWHKFLHQINVVPNKEPFYKI-INQGMILVNGEKMSKSKG 581

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML 312
           N +  ++ + +         A  +RL M+
Sbjct: 582 NVVNPSDFVVSHG-------ADALRLYMM 603


>gi|159902802|ref|YP_001550146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|254782425|sp|A9BDK6|SYI_PROM4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|159887978|gb|ABX08192.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 969

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 47/125 (37%), Gaps = 2/125 (1%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            +     LG   D++  G D      ++ +  S   +       +  H   L+  GRKMS
Sbjct: 569 VSCQRDELGYPADLYLEGTDQHRGWFQSSLLTSVAVNGHAPYKKVLTHGFALDENGRKMS 628

Query: 280 KSNGNFITINELL--ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN I    ++   T K    ++ A V+RL +    Y   +      L +   +  K 
Sbjct: 629 KSLGNIIDPTVIINGGTNKKTDPAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKV 688

Query: 338 PQTST 342
             TS 
Sbjct: 689 RNTSR 693


>gi|77414609|ref|ZP_00790750.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159348|gb|EAO70518.1| valyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 883

 Score = 43.7 bits (102), Expect = 0.064,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|319777538|ref|YP_004137189.1| isoleucyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|318038613|gb|ADV34812.1| Isoleucyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 888

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
            +      L   +D++  G D       + +  S   +      NI  H   L+ +G KM
Sbjct: 534 MAVNIDKGLETPYDLYLEGSDQFRGWFNSSLINSVAYNGKAPYKNIVSHGFVLDAKGEKM 593

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++           A ++RL +  + Y   +  +   + +   +  K  
Sbjct: 594 SKSKGNVVDPLKIISKNG-------ADILRLWVANSEYSNDVSISDNIINQNSEIYRKIR 646

Query: 339 QT 340
            T
Sbjct: 647 NT 648


>gi|301299745|ref|ZP_07205994.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|300852652|gb|EFK80287.1| leucine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 805

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 14/146 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  ++++E        + A  +RL  M M      I ++ + L  
Sbjct: 570 LGSNHEKMSKSKGNVVNPDDIVE-------QYGADTLRLYEMFMGPLDASIPWSEEGLGG 622

Query: 330 AEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           A   +++ W         +   V +   +DL+     +  ++  ++ T++++ +    A 
Sbjct: 623 AYKFINRVWNLLIDENDNLRDRVTTINNHDLD-----KIYNETVKKVTEDYEAMHFNTAI 677

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQ 414
           + ++         +      +E LV+
Sbjct: 678 SQLMVFVNNAYKADSLPLEYVEGLVK 703


>gi|50913539|ref|YP_059511.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|60390672|sp|Q5XE35|SYL_STRP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50902613|gb|AAT86328.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|26326779|dbj|BAC27133.1| unnamed protein product [Mus musculus]
          Length = 1178

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 43/136 (31%), Gaps = 43/136 (31%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKS 281
                D+   G DLI  H      N +A                  NG L L   KMSKS
Sbjct: 666 FWYPVDLRASGKDLIPNHLSYYIYNHVAMWPEQSDKWPVSVRA---NGHLLLNSEKMSKS 722

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GNF+T+++ ++        + A  +RL                 L +A   +       
Sbjct: 723 TGNFLTLSQAVD-------KFSADGMRL----------------ALADAGDTVE------ 753

Query: 342 TSKGIIDPAVLSALYN 357
                 D   + A+ +
Sbjct: 754 ------DANFVEAMAD 763


>gi|312867136|ref|ZP_07727346.1| isoleucine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311097265|gb|EFQ55499.1| isoleucine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 65/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++ +N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYENFEFLTIYKALVNFINVDLSAFYLD 722


>gi|308190205|ref|YP_003923136.1| isoleucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|307624947|gb|ADN69252.1| isoleucine--tRNA ligase [Mycoplasma fermentans JER]
          Length = 888

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
            +      L   +D++  G D       + +  S   +      NI  H   L+ +G KM
Sbjct: 534 MAVNIDKGLETPYDLYLEGSDQFRGWFNSSLINSVAYNGKAPYKNIVSHGFVLDAKGEKM 593

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++           A ++RL +  + Y   +  +   + +   +  K  
Sbjct: 594 SKSKGNVVDPLKIISKNG-------ADILRLWVANSEYSNDVSISDNIINQNSEIYRKIR 646

Query: 339 QT 340
            T
Sbjct: 647 NT 648


>gi|307705381|ref|ZP_07642240.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK597]
 gi|307621044|gb|EFO00122.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK597]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|306829906|ref|ZP_07463093.1| isoleucine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427917|gb|EFM31010.1| isoleucine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|293365883|ref|ZP_06612586.1| isoleucine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307702288|ref|ZP_07639246.1| isoleucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
 gi|291315561|gb|EFE56011.1| isoleucine--tRNA ligase [Streptococcus oralis ATCC 35037]
 gi|307624091|gb|EFO03070.1| isoleucyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|260494223|ref|ZP_05814354.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260198369|gb|EEW95885.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 636

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 70/435 (16%), Positives = 127/435 (29%), Gaps = 112/435 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T +D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMGMDTYF-----MTGLDEH---GQKVEQAAEQNGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIIL--HGHAYE 147
                T K T  F      L         R T       + +++ ++        G  YE
Sbjct: 66  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEDRHKKAVRRILDMVNAKGDIYKGE-YE 123

Query: 148 ANNEIIFDT----------SSIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFI 192
               I  +T          +  P+ G   R   +E              K+ +++P DFI
Sbjct: 124 GKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHP-DFI 182

Query: 193 LWKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYL 227
           L          +            + +  G P      HI            ++      
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAGFEND 242

Query: 228 GKVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRK 277
            K FD        +H  G D+I  H         C       K  +  + +G+   EG K
Sbjct: 243 EKKFDKFWNNARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 298

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFT------------- 323
           MSKS GN +   + +       + +     R  +L   ++    D++             
Sbjct: 299 MSKSRGNVVNPYDEI-------KKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLA 351

Query: 324 -------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND-----------LNTVSAI 365
                   + L   +   +     S++   ID   + +++ND                A+
Sbjct: 352 NDLGNLLNRTLGMYKKYFNGVVVASSTAEPIDDE-IKSMFNDVIKDVEKYMYLFEFSRAL 410

Query: 366 QALHKLARESTKNHD 380
           + + K      K  D
Sbjct: 411 ETIWKFISRLNKYID 425


>gi|238810099|dbj|BAH69889.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 893

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 7/122 (5%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
            +      L   +D++  G D       + +  S   +      NI  H   L+ +G KM
Sbjct: 539 MAVNIDKGLETPYDLYLEGSDQFRGWFNSSLINSVAYNGKAPYKNIVSHGFVLDAKGEKM 598

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++           A ++RL +  + Y   +  +   + +   +  K  
Sbjct: 599 SKSKGNVVDPLKIISKNG-------ADILRLWVANSEYSNDVSISDNIINQNSEIYRKIR 651

Query: 339 QT 340
            T
Sbjct: 652 NT 653


>gi|242279474|ref|YP_002991603.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|259511501|sp|C6BV89|SYI_DESAD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|242122368|gb|ACS80064.1| isoleucyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 937

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN I   E+++          A ++R+ +   +Y+E +  + + 
Sbjct: 602 HGYVVDKDGRKMSKSIGNVIAPQEIIDQHG-------AEILRMWVSAVNYQEDVRISDEI 654

Query: 327 LTEAEILLSKWPQT 340
           L+       +   T
Sbjct: 655 LSRMVDTYRRVRNT 668


>gi|198421128|ref|XP_002120548.1| PREDICTED: similar to leucyl-tRNA synthetase [Ciona intestinalis]
          Length = 1182

 Score = 43.7 bits (102), Expect = 0.065,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 8/83 (9%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK-TANIWIHNGFLNLEGRKMSKSNGNFITI 288
             D+   G DL+  H    +   C     ++        NG L L   KMSKS GNF+T+
Sbjct: 673 PVDLRVSGKDLVPNHLTYFLYNHCAVWPDKEMWPRGVRANGHLLLNSEKMSKSTGNFLTL 732

Query: 289 NELLETKKFGGRSWPAPVIRLAM 311
           +  L+        + A  +RLA+
Sbjct: 733 SNALDR-------FSADGMRLAL 748


>gi|303273506|ref|XP_003056114.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226462198|gb|EEH59490.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 600

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 45/139 (32%), Gaps = 11/139 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+     + D   R  R    +        +T  D+  ++    E  +     
Sbjct: 72  VNDQPHIGHVYTSTIADAYARFQRSRGRDVFF-----LTGTDEHGLK---VEQSAQKRGI 123

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +   +  +N+  F +    +         R T   H  Q+ + +  +   G  Y    E 
Sbjct: 124 SPQELADENSATFRQVLDDMGI-TFDGFIRTTEPYHKSQVQHFVDKLREKGDVYLGKFEG 182

Query: 153 IFDTSSIPNYGSFSRRKID 171
            +D      Y     +++D
Sbjct: 183 WYDEGQEEYYTETKAKELD 201


>gi|194385302|dbj|BAG65028.1| unnamed protein product [Homo sapiens]
          Length = 1130

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 618 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 675

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 676 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 705

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 706 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 738


>gi|139473022|ref|YP_001127737.1| leucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|166231648|sp|A2RCB2|SYL_STRPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134271268|emb|CAM29484.1| leucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|94989658|ref|YP_597758.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|123382456|sp|Q1JIV9|SYL_STRPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94543166|gb|ABF33214.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|94987780|ref|YP_595881.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94991651|ref|YP_599750.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|161936127|ref|YP_281511.2| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|123080438|sp|Q1JNR2|SYL_STRPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123382351|sp|Q1JDV2|SYL_STRPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94541288|gb|ABF31337.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94545159|gb|ABF35206.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|71902811|ref|YP_279614.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|123761452|sp|Q48VJ7|SYL_STRPM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71801906|gb|AAX71259.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|15674378|ref|NP_268552.1| leucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|32171582|sp|Q9A1P0|SYL_STRP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13621467|gb|AAK33273.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|77408959|ref|ZP_00785681.1| leucyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77172422|gb|EAO75569.1| leucyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|22538192|ref|NP_689043.1| leucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|25012050|ref|NP_736445.1| leucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76797851|ref|ZP_00780115.1| leucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77412992|ref|ZP_00789195.1| leucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|54039681|sp|P67515|SYL_STRA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54042039|sp|P67514|SYL_STRA3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22535102|gb|AAN00916.1|AE014284_11 leucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|24413593|emb|CAD47671.1| leucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|76586811|gb|EAO63305.1| leucyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
 gi|77161004|gb|EAO72112.1| leucyl-tRNA synthetase [Streptococcus agalactiae 515]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.066,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|320095415|ref|ZP_08027092.1| hypothetical protein HMPREF9005_1704 [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319977608|gb|EFW09274.1| hypothetical protein HMPREF9005_1704 [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 42

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 8/29 (27%), Positives = 15/29 (51%)

Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNG 451
           K +S AD +R +L   G ++ D ++    
Sbjct: 11  KDWSRADALRDRLAGAGVVVADGRDGATW 39


>gi|319746032|gb|EFV98311.1| leucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|306828157|ref|ZP_07461420.1| leucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304429694|gb|EFM32740.1| leucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 49/148 (33%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLVTTKEIVAENSGALDKVYNETVKAVTEQIETM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              L   +      L I     HL + +
Sbjct: 718 EDKLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|257865153|ref|ZP_05644806.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257871477|ref|ZP_05651130.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257799087|gb|EEV28139.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257805641|gb|EEV34463.1| valyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 881

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I QS          N+ IH    + +GRKMSKS GN I   E++E        + A  +R
Sbjct: 496 IFQSLEFTGKRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-------QYGADALR 548

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +        + + F+ +++  A   ++K    S 
Sbjct: 549 WFLSNGSAP-GQDVRFSYEKMDAAWNFINKIWNASR 583


>gi|229135869|ref|ZP_04264636.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228647578|gb|EEL03646.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 544

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE         +  I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTVKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|227509271|ref|ZP_03939320.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227191269|gb|EEI71336.1| methionine--tRNA ligase [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 675

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 49/154 (31%), Gaps = 41/154 (26%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYRE 318
                   +G+L ++  KMSKS GN I    L++        +    +R  +L    Y  
Sbjct: 293 PLPKTVYGHGWLLMKDGKMSKSKGNVIYPETLMDR-------YGLDALRYYLLRAMPYAN 345

Query: 319 PIDFTVQ---------RLTEAEILLSK------------WPQTSTSKGIIDPA------- 350
              FT +            +   LL++             P+        D         
Sbjct: 346 DGIFTPEDFVDRVNFDLANDLGNLLNRTVSMINKYEGGIIPEFKAGVNEADKELEEVSKE 405

Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHD 380
                  ++ +DL+   A+  + KL  +S K  D
Sbjct: 406 SIAGFKKSM-DDLHFSEALSEVWKLVSQSNKYID 438


>gi|114602541|ref|XP_518016.2| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 7 [Pan
           troglodytes]
          Length = 1130

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 618 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 675

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 676 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 705

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 706 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 738


>gi|73542430|ref|YP_296950.1| isoleucyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|72119843|gb|AAZ62106.1| Isoleucyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 974

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN ++  ++            A +IRL +  T 
Sbjct: 627 YGKPPYKALLTHGFTVDGEGRKMSKSVGNTVSPQDI-------ANKMGAEIIRLWVASTD 679

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 680 YSGELSISDEILKRVVESYRRIRNT 704


>gi|85374072|ref|YP_458134.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84787155|gb|ABC63337.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 519

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 40/125 (32%), Gaps = 30/125 (24%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  DV+ R  R    +     VR  T  D+  ++ AR+         +   
Sbjct: 18  PHIGHAYEAIAADVIARFQRQRGLD-----VRFQTGTDEHGLKMARKAEEQ---GKSPRD 69

Query: 99  ITSKNTQQFVKDTTRLAC--------LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
           +  + +  F      L          +   H  RA+  I               A EA  
Sbjct: 70  LADEMSGYFKAMCDALNVSCDRFIRTVDDDHH-RASQAI-------------WRAMEAAG 115

Query: 151 EIIFD 155
           ++  D
Sbjct: 116 DLYLD 120



 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +     ++ H GF+  +GRK SKS GN    ++L
Sbjct: 255 DLHLIGKDIVRFHTIYWPAFLMSA-GLPVPKQVFGH-GFVLKDGRKESKSLGNVTDPHDL 312

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
            +        +    +R  ++    +    +++ + +
Sbjct: 313 AD-------FYGVDALRYFLMREVSFGSDGNWSHEAI 342


>gi|329118022|ref|ZP_08246735.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327465910|gb|EGF12182.1| isoleucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 928

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN +   E+          + A ++RL   
Sbjct: 580 CATLGRAPYKQLLTHGFVVDQDGRKMSKSLGNVVAPQEV-------YNEFGADILRLWTA 632

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 633 TTDYSGELAISKEILKRVTESYRRLRNT 660


>gi|288574922|ref|ZP_06393279.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570663|gb|EFC92220.1| isoleucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 924

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +  H   ++ +G+KMSKS GN +   E+++T         A ++RL +
Sbjct: 578 SVATRGVAPYKAVLTHGFIVDGKGKKMSKSIGNVVAPQEIIDTNG-------ADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y+  I  +   +        +   T+ 
Sbjct: 631 ASTDYKNDIRISKTIIRTLSEEYRRIRNTAR 661


>gi|154245393|ref|YP_001416351.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154159478|gb|ABS66694.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 894

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 41/126 (32%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      HIG+ R  ++ DVL R  R       V +              A      I  
Sbjct: 59  PYPSGRIHIGHGRNYVMGDVLARYKRMQGFN--VLHPMGWDAFGLPAENAA------IER 110

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
                  T +N     +    L      ++  AT   ++  +   +  + + +G AY   
Sbjct: 111 GIHPKSWTYENIASMREQLQLLGLSLDWNREIATCDPSYYAEQQRIFLDFLDNGLAYRKE 170

Query: 150 NEIIFD 155
           +E+ +D
Sbjct: 171 SEVNWD 176


>gi|150021072|ref|YP_001306426.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
 gi|149793593|gb|ABR31041.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
          Length = 634

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 11/116 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I+ D++ R  R    +  V Y+    +   KI++ A++    I    
Sbjct: 13  VNSEPHIGSAYTTIIGDIIARYKRLIGYD--VFYLTGTDEHGQKIMQAAKKRE--IEPKQ 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA 148
               ++ K +Q   KD          +  R T+  H+  +   +  ++ +G  Y+ 
Sbjct: 69  LCDELSEKFSQL-WKDLKITN----DYFIRTTDPKHMKTVQLFVSKMLENGDIYKG 119



 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            I+ H G+L + G+K+SKS GN I   E +       + +   V+R  +     R+ +  
Sbjct: 285 KIFAH-GWLTVNGQKISKSLGNAIDPREFV-------KKYGNDVVRYYLA----RDIVFG 332

Query: 321 ---DFTVQRL 327
              DF+ + L
Sbjct: 333 KDGDFSEENL 342


>gi|58581249|ref|YP_200265.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623169|ref|YP_450541.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|81311913|sp|Q5H2E1|SYI_XANOR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123739148|sp|Q2P5B0|SYI_XANOM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58425843|gb|AAW74880.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367109|dbj|BAE68267.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.067,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTAR 676


>gi|308048500|ref|YP_003912066.1| isoleucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
 gi|307630690|gb|ADN74992.1| Isoleucyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
          Length = 940

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL +
Sbjct: 582 SVAMKDAAPYKQVLTHGFTVDGKGRKMSKSLGNVMSPQQVVNKLG-------ADILRLWV 634

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   TS 
Sbjct: 635 ASTDYTGEMTVSDEILKRSADAYRRIRNTSR 665


>gi|166713092|ref|ZP_02244299.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 943

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTAR 676


>gi|84029562|sp|Q46XM7|SYI_RALEJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 963

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN ++  ++            A +IRL +  T 
Sbjct: 616 YGKPPYKALLTHGFTVDGEGRKMSKSVGNTVSPQDI-------ANKMGAEIIRLWVASTD 668

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 669 YSGELSISDEILKRVVESYRRIRNT 693


>gi|121606674|ref|YP_984003.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|166231627|sp|A1VTV4|SYL_POLNA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120595643|gb|ABM39082.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 888

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           Y C    Y     H+G+ R   + D+L R LR       +          D     A  E
Sbjct: 36  YACSMLPYPSGKLHMGHVRNYTINDMLSRYLRMKGYNVLMPMGW------DAFGLPA--E 87

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILH 142
           + ++      +  T  N     K    +  LA           P      Q     ++  
Sbjct: 88  NAALKNGVPPAQWTYDNIAYMKKQMQAMG-LAVDWSREIATCDPSYYKWNQWLFLKMLEK 146

Query: 143 GHAYEANNEIIFD 155
           G AY     + +D
Sbjct: 147 GIAYRKTQVVNWD 159


>gi|332158392|ref|YP_004423671.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033855|gb|AEC51667.1| leucyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 500

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 46/120 (38%), Gaps = 8/120 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I       R E        NGF  LEG+KMSKS GN +   
Sbjct: 321 PLDWRCSAKDLIPNHLTFFIFNHTAIFRKEYWPRGIAVNGFRTLEGQKMSKSKGNALNFI 380

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           + +E          A V+RL ++ +  +    D+  + + +    + ++ +  +     +
Sbjct: 381 DAIEENG-------ADVVRLYIMGLAEHDSDFDWRRKEVGKLRRQVERFYELISEFATYE 433


>gi|188575772|ref|YP_001912701.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520224|gb|ACD58169.1| isoleucyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 926

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 578 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 630

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 631 ADYSNEMSLSQEILKRNADAYRRLRNTAR 659


>gi|156101091|ref|XP_001616239.1| hypothetical protein [Plasmodium vivax SaI-1]
 gi|148805113|gb|EDL46512.1| hypothetical protein, conserved [Plasmodium vivax]
          Length = 1362

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 35/108 (32%), Gaps = 38/108 (35%)

Query: 230 VFDIHGGGLDLIFPHHE------------------------------------NEIAQSC 253
            FD+   G DLIF H                                      NEI Q  
Sbjct: 853 PFDVRISGKDLIFNHLTMALFNHVAIWGKKTYSNKQKETNDDKSILERQGEILNEIDQLD 912

Query: 254 --CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
               + ++     +  NG + +   KMSKS GNFIT+ + +      G
Sbjct: 913 LDAYETVKYFPKSFFCNGHVLVNKEKMSKSKGNFITLKQSINLYTSDG 960


>gi|118474589|ref|YP_891971.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|118413815|gb|ABK82235.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 632

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 38/128 (29%), Gaps = 17/128 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D + R  R    +   T+    TD   + IE A + H       
Sbjct: 12  VNDVPHIGHAYTTIIADTMARYYRLVGYD---TFFLTGTDEHGQKIEEAAKAH-----CK 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-----NIILHGHAYEAN 149
                  + + +F             H  R T                 +   G  Y+  
Sbjct: 64  TPKEYADEVSAKFRSLWDEFEISY-DHFIRTT---DDYHKFTAQNVFLKMYEKGDIYKGE 119

Query: 150 NEIIFDTS 157
            E  +  S
Sbjct: 120 YEGNYCVS 127


>gi|27468349|ref|NP_764986.1| leucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251811139|ref|ZP_04825612.1| leucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|293366301|ref|ZP_06612981.1| leucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27315895|gb|AAO05030.1|AE016748_264 leucyl-rRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|251805359|gb|EES58016.1| leucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|291319539|gb|EFE59905.1| leucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 814

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 533 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 592

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 593 NVINPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLII 645

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
           T +  I+  ++ +                  D +T+S   AI  L     E  K +++
Sbjct: 646 TDENSINKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEV 703


>gi|33151511|ref|NP_872864.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|81423872|sp|Q7VP34|SYI_HAEDU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33147731|gb|AAP95253.1| isoleucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 935

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G+  D++  G D       + +  +   +       +  H   ++ +GRKMSKS GN
Sbjct: 548 EFNGQTADMYLEGSDQHRGWFMSSLMLASATNGKAPYQQVLTHGFVVDEKGRKMSKSIGN 607

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            I  +E+            A ++RL +  T Y   +  +   L  A     +   T+ 
Sbjct: 608 VIVPSEVWNKNG-------ADILRLWVASTDYTAEMKVSHGILNSAGDAYRRIRNTAR 658


>gi|103485609|ref|YP_615170.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98975686|gb|ABF51837.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 580

 Score = 43.7 bits (102), Expect = 0.068,   Method: Composition-based stats.
 Identities = 52/336 (15%), Positives = 98/336 (29%), Gaps = 60/336 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D L  LL +        Y  N       I+ R+  +     +
Sbjct: 135 PT--GPMHMGHCRGAVVGDALANLLAFTGHRVIREYYINDAGGQVDILARSAHQRYREAL 192

Query: 93  NDAISIITS-----KNTQQFVKDTTR--------------LACLAPTHQPRATNHIPQMI 133
            +++  I          +   +                  LA             I + +
Sbjct: 193 GESLGEIAEGLYPGDYLKPVGEALAADFGGRYADAPETDWLAIFRARTVAAMMETIREDL 252

Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFI 192
            L+         + +  +++              R +  +  +     E      P    
Sbjct: 253 ALLGISHDR---FASEADLVAAGKPDDAEAWLRERDLVYDGVLEPPKGEVSKDWEPIALP 309

Query: 193 LWKRSTPMEPGWESPWGRGRPGW---------HIECSAMSSHYLGKVFDI----HGGGLD 239
           L++ +   +   + P  +    W         H E +  +        DI    H G + 
Sbjct: 310 LFRSTKFGDDQ-DRPIRKPDGSWTYFGVDLAYHFEKARDADEL----IDIWGADHAGTVM 364

Query: 240 LIFPHHENEIAQSCCAD-RIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKK 296
            I       +A +       ++     +    L   G   KMSK  GNF+T+ +++    
Sbjct: 365 RI-------VAAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVI---- 413

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
              R     V+R  ML       +DF    + EA  
Sbjct: 414 ---REVGKDVVRFMMLTRKAEASMDFDFATVVEASK 446


>gi|307104070|gb|EFN52326.1| hypothetical protein CHLNCDRAFT_36907 [Chlorella variabilis]
          Length = 1038

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A+       +  H   L+ +G KMSKS GN I    ++   K   +   + A V+RL
Sbjct: 646 SVAANGHAPYKQVLTHGFVLDDKGMKMSKSLGNVIDPRVVMLGGKDAKKEPPYGADVLRL 705

Query: 310 AMLMTHYREPI 320
            +    Y   +
Sbjct: 706 WVSSVDYSSDV 716


>gi|209558724|ref|YP_002285196.1| leucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|238064872|sp|B5XJI9|SYL_STRPZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209539925|gb|ACI60501.1| Leucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|206890484|ref|YP_002248496.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742422|gb|ACI21479.1| isoleucyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 915

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN I+  E++++         A ++RL +    YR+ I  + + 
Sbjct: 591 HGFTVDGQGRKMSKSLGNVISPQEIIKSNG-------ADIVRLWVSAEDYRDDIKLSQEI 643

Query: 327 LTEAEILLSKWPQT 340
           L        K   T
Sbjct: 644 LQRLTEAYRKIRNT 657


>gi|124028098|ref|YP_001013418.1| leucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978792|gb|ABM81073.1| Leucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 935

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    I         +K     + NGF+ LEG+KMSKS  N I +   L   
Sbjct: 566 SGRDLVPNHLTFFIFNHVAIFPRDKWPRQIVVNGFVMLEGKKMSKSLRNIIPLRRAL--- 622

Query: 296 KFGGRSWPAPVIR 308
               R +    +R
Sbjct: 623 ----RIYGPDTVR 631


>gi|104780203|ref|YP_606701.1| methionine--tRNA ligase [Pseudomonas entomophila L48]
 gi|95109190|emb|CAK13887.1| putative Methionine--tRNA ligase [Pseudomonas entomophila L48]
          Length = 662

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 9/125 (7%)

Query: 33  PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           PT     H+G+   P I  DVL R+L        V Y     D    ++  A +E  S  
Sbjct: 120 PTPNGDLHLGHLSGPYIAGDVLKRVL--AGAGAQVFYGSGRDDNQTYVVTCAAREGFSPS 177

Query: 92  INDAISIITSKNT-QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
                     + T Q +  D                 +   + + +Q +   G  Y  + 
Sbjct: 178 ECADHYAEAIRETWQGYGIDMD-FFITPDNQG----EYADFVHHYLQRLYDQGLIYAKDT 232

Query: 151 EIIFD 155
            +  D
Sbjct: 233 PVFVD 237


>gi|315612362|ref|ZP_07887275.1| leucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315315343|gb|EFU63382.1| leucine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +        + + G +D             + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIAAENNGALDKVYNETVKAVTEQIESM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EDKL 721


>gi|307707452|ref|ZP_07643934.1| isoleucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
 gi|307616404|gb|EFN95595.1| isoleucyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
          Length = 930

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSTNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|194381436|dbj|BAG58672.1| unnamed protein product [Homo sapiens]
          Length = 1122

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 610 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 667

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 668 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 697

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 698 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 730


>gi|194290606|ref|YP_002006513.1| isoleucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|254782383|sp|B3R6E8|SYI_CUPTR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|193224441|emb|CAQ70452.1| isoleucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 966

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN ++  ++            A +IRL +  T 
Sbjct: 619 YGKPPYKALLTHGFTVDGEGRKMSKSIGNTVSPQDI-------ANKMGAEIIRLWVASTD 671

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 672 YSGELSISDEILKRVVESYRRIRNT 696


>gi|118479624|ref|YP_896775.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196044847|ref|ZP_03112081.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225866439|ref|YP_002751817.1| valyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229186699|ref|ZP_04313858.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|118418849|gb|ABK87268.1| valyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196024335|gb|EDX63008.1| valyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225789413|gb|ACO29630.1| valine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228596802|gb|EEK54463.1| Valyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 881

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|154175104|ref|YP_001407916.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112803429|gb|EAU00773.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 636

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 36/125 (28%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D   R  R        TY    TD         + E  +     
Sbjct: 14  VNDVPHIGHAYTTIIADTFARFKRLQG---HPTYFMTGTD-----EHGQKIEQAAKARGK 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F             H  R T   H      +   +  +G  Y+   E 
Sbjct: 66  TPKEYADEISAKFRTLWDEFEISY-DHFIRTTDEEHKLTAQNVFSKMQANGDIYKGEYEG 124

Query: 153 IFDTS 157
            +  S
Sbjct: 125 FYCVS 129



 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+    G KMSKS GN I   E+        +++     R  ML    + +  DF+ + 
Sbjct: 289 HGWWTRNGEKMSKSKGNVIDPREV-------AKAYGLENFRYFMLREVPFGQDGDFSQKA 341

Query: 327 LTE 329
           L E
Sbjct: 342 LIE 344


>gi|49478642|ref|YP_038508.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81394711|sp|Q6HD68|SYV_BACHK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49330198|gb|AAT60844.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 881

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|7243085|dbj|BAA92590.1| KIAA1352 protein [Homo sapiens]
          Length = 1212

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 700 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 757

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 758 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 787

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 788 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 820


>gi|108773810|ref|NP_064502.9| leucyl-tRNA synthetase, cytoplasmic [Homo sapiens]
 gi|48428689|sp|Q9P2J5|SYLC_HUMAN RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|119582252|gb|EAW61848.1| leucyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
 gi|152013023|gb|AAI50214.1| LARS protein [Homo sapiens]
 gi|153217431|gb|AAI51215.1| Leucyl-tRNA synthetase [Homo sapiens]
 gi|156230743|gb|AAI52423.1| Leucyl-tRNA synthetase [Homo sapiens]
 gi|168278863|dbj|BAG11311.1| leucyl-tRNA synthetase [synthetic construct]
          Length = 1176

 Score = 43.7 bits (102), Expect = 0.069,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|327462898|gb|EGF09219.1| valine--tRNA ligase [Streptococcus sanguinis SK1]
          Length = 882

 Score = 43.7 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 12/126 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW    SA    Y      +   G D+IF      I QS      +   N+ IH    + 
Sbjct: 459 GWPDVDSADFKRYFPTSTLV--TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   ++++        + A  +R  +        + + F+ +++  + 
Sbjct: 517 EGRKMSKSLGNGIDPMDVID-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 568

Query: 332 ILLSKW 337
             ++K 
Sbjct: 569 NFINKI 574


>gi|295692697|ref|YP_003601307.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030803|emb|CBL50282.1| Isoleucyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 928

 Score = 43.7 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 52/147 (35%), Gaps = 13/147 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 570 SVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 623 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKESRVAYDDLRSVDQYME 682

Query: 368 --LHKLARESTKNHDLLPIFNASAHIL 392
             L+ L ++    +D     +    + 
Sbjct: 683 VKLNDLIKDCIAAYDKFDFTDVFKKVF 709


>gi|196039248|ref|ZP_03106554.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029875|gb|EDX68476.1| valine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 881

 Score = 43.7 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|114602539|ref|XP_001156890.1| PREDICTED: cytosolic leucyl-tRNA synthetase isoform 3 [Pan
           troglodytes]
          Length = 1175

 Score = 43.7 bits (102), Expect = 0.070,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 663 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 720

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 721 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 750

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 751 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 783


>gi|312216960|emb|CBX96909.1| hypothetical protein [Leptosphaeria maculans]
          Length = 725

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/176 (15%), Positives = 56/176 (31%), Gaps = 19/176 (10%)

Query: 17  EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NI 72
           + + ID     +    P      H+G+ R   + DVL R  ++  G K +  +      +
Sbjct: 66  DLRPIDRGEAYVLPMFPYPSGTLHLGHLRVYTISDVLARY-KHMQGYKVLHPIGWDAFGL 124

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR--LACLAPTHQPRATNHIP 130
              +  I      E  ++   +A+         ++  D+    L    P        H  
Sbjct: 125 PAENAAIERGVHPEKWTLQNIEAMKAQMHVMGGRWDWDSLAQELRTCDPDFY----KHTQ 180

Query: 131 QMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           ++  +   +   G AY+A + +              +  ++D      R   K  K
Sbjct: 181 RIFLM---LHERGLAYQAESLVNYDPVDKT----VLANEQVDANGCSWRSGAKVEK 229


>gi|254757634|ref|ZP_05209661.1| valyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
          Length = 881

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|152983469|ref|YP_001346507.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
 gi|166231631|sp|A6V0C2|SYL_PSEA7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150958627|gb|ABR80652.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
          Length = 873

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 42/145 (28%), Gaps = 21/145 (14%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
             +F  +      M+   P      H+G+ R   + DV+ R  R           RN+  
Sbjct: 32  KEKFYCL-----SMF---PYPSGKLHMGHVRNYTIGDVISRYHRMQG--------RNVLQ 75

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
                      E+ ++  N A +  T  N          L  LA       T   P    
Sbjct: 76  PMGWDAFGMPAENAAMKNNVAPAAWTYDNIAYMKSQLDSLG-LAIDWTREVTTCKPDYYR 134

Query: 135 LIQ----NIILHGHAYEANNEIIFD 155
             Q     +   G  Y  N  + +D
Sbjct: 135 WEQWLFTRLFEKGVIYRKNGTVNWD 159


>gi|34499024|ref|NP_903239.1| isoleucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|81654651|sp|Q7NS57|SYI_CHRVO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|34104874|gb|AAQ61231.1| isoleucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 925

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +G KMSKS GN I   E+  T         A ++RL + 
Sbjct: 577 CATIGRAPYKQLLTHGFTVDDKGYKMSKSKGNGIAPEEICGTLG-------ADILRLWVA 629

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
              Y   +  + + L        +   T
Sbjct: 630 SADYSGDMSLSQEILKRTTESYRRLRNT 657


>gi|30264526|ref|NP_846903.1| valyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47529989|ref|YP_021338.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187350|ref|YP_030602.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65321827|ref|ZP_00394786.1| COG0525: Valyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165872012|ref|ZP_02216653.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167640706|ref|ZP_02398966.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708361|ref|ZP_02898805.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177653987|ref|ZP_02936028.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567025|ref|ZP_03019941.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218905660|ref|YP_002453494.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227817238|ref|YP_002817247.1| valyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229093554|ref|ZP_04224656.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229600610|ref|YP_002868742.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254724614|ref|ZP_05186397.1| valyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254736562|ref|ZP_05194268.1| valyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254754802|ref|ZP_05206837.1| valyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|81581271|sp|Q81LD3|SYV_BACAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|30259184|gb|AAP28389.1| valine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47505137|gb|AAT33813.1| valyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181277|gb|AAT56653.1| valyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712302|gb|EDR17838.1| valyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167511278|gb|EDR86664.1| valyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126736|gb|EDS95619.1| valyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172081042|gb|EDT66120.1| valyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190562016|gb|EDV15985.1| valyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|218536093|gb|ACK88491.1| valyl-tRNA synthetase [Bacillus cereus AH820]
 gi|227005238|gb|ACP14981.1| valine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|228689884|gb|EEL43689.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|229265018|gb|ACQ46655.1| valine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 881

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|323466796|gb|ADX70483.1| Isoleucyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 929

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 571 SVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 624 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYDDLRSVDQYME 683

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L +E    +D          +   
Sbjct: 684 VKLNDLIKECLAAYDKFDFTTVFKKVFNF 712


>gi|319790089|ref|YP_004151722.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114591|gb|ADU97081.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 547

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 51/311 (16%), Positives = 101/311 (32%), Gaps = 37/311 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V DVLYR++R         +  N      +++  +         
Sbjct: 126 PT--GPLHVGHGRGAVVGDVLYRIMRLTGYVPEREFYINDAGRQIRLLGLSIYLRAKQLK 183

Query: 93  NDAISIITSKNTQQFVKDTTR--LACLAPTH----QPRATNHIPQM--IYLIQNIILHGH 144
            + + +        ++ +  +  L  + P      +  A     Q     L++ I     
Sbjct: 184 GENVELPEDAYRGDYIVELAKKLLEEVRPDLLDLPEEEAVEVAAQFGKEELLKEIEADLK 243

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
                 +  F   S+ + G      I+E           ++K   D  LW ++T      
Sbjct: 244 KLRVEFDNWFSEKSLHDSGK-----IEEVLKLLEEKGLLYEK---DGALWLKTTLFGDDK 295

Query: 205 E--SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
           +       G   +     A     L + +D     +D+    H   I +   A +     
Sbjct: 296 DRVVKRSTGEYTYFAADIAYHYDKLKRGYD---RAVDVWGADHHGYIPRVEAALKALGAP 352

Query: 263 NIWIHNGFLNL-------EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
             W+    + +       +  KMSK  G+F+ +  L+E             +R   L+  
Sbjct: 353 EGWLEVVLIQMVKLFKGGKEVKMSKRKGDFVPLRWLMEQVGVDP-------VRFFFLLKR 405

Query: 316 YREPIDFTVQR 326
           +  P+DF +  
Sbjct: 406 HDTPLDFDLDL 416


>gi|297183629|gb|ADI19755.1| hypothetical protein [uncultured gamma proteobacterium EB000_37F04]
          Length = 938

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
              +     ++  H   ++ +GRKMSKS GN I             +   A V+RL +  
Sbjct: 576 AIHQGAPYRSVLTHGFTVDGDGRKMSKSLGNII-------PAGKAMQELGADVLRLWVSA 628

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             YR  I  + +          +   T+ 
Sbjct: 629 ADYRNEISASDEIFKRTADAYRRIRNTAR 657


>gi|282875824|ref|ZP_06284691.1| leucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|281294849|gb|EFA87376.1| leucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|329737148|gb|EGG73402.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU028]
 gi|329737499|gb|EGG73752.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 805

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLII 636

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
           T +  I+  ++ +                  D +T+S   AI  L     E  K +++
Sbjct: 637 TDENSINKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEV 694


>gi|262377098|ref|ZP_06070323.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262307836|gb|EEY88974.1| isoleucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 948

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN IT  ++++     G       +R  +    YR  +    + 
Sbjct: 605 HGFVVDEKGRKMSKSIGNVITPQDIIKDMGADG-------LRFWIASADYRYEMTAGKEI 657

Query: 327 LTEAEILLSKWPQT 340
            + A     +   T
Sbjct: 658 FSRASDGYRRIRNT 671


>gi|256027687|ref|ZP_05441521.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289765647|ref|ZP_06525025.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717202|gb|EFD81214.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 639

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 70/435 (16%), Positives = 127/435 (29%), Gaps = 112/435 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T +D+      + E  +     
Sbjct: 17  VNGDPHVGSAYTTIAADVINRYNKAMGMDTYF-----MTGLDEH---GQKVEQAAEQNGY 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIIL--HGHAYE 147
                T K T  F      L         R T       + +++ ++        G  YE
Sbjct: 69  TPQAWTDKMTPNFKNMWAALDIKYDDF-IRTTEDRHKKAVRRILDMVNAKGDIYKGE-YE 126

Query: 148 ANNEIIFDT----------SSIPNYGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFI 192
               I  +T          +  P+ G   R   +E              K+ +++P DFI
Sbjct: 127 GKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHP-DFI 185

Query: 193 LWKRSTPMEPGW-----------ESPWGRGRP----GWHIE----------CSAMSSHYL 227
           L          +            + +  G P      HI            ++      
Sbjct: 186 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAGFEND 245

Query: 228 GKVFD--------IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLEGRK 277
            K FD        +H  G D+I  H         C       K  +  + +G+   EG K
Sbjct: 246 EKKFDKFWNNARVVHLIGKDIIRFH----AIIWPCMLLSAGIKLPDSIVAHGWWTSEGEK 301

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFT------------- 323
           MSKS GN +   + +       + +     R  +L   ++    D++             
Sbjct: 302 MSKSRGNVVNPYDEI-------KKYGVDAFRYYLLREANFGTDGDYSTKGIIGRLNSDLA 354

Query: 324 -------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND-----------LNTVSAI 365
                   + L   +   +     S++   ID   + +++ND                A+
Sbjct: 355 NDLGNLLNRTLGMYKKYFNGVVVASSTAEPIDDE-IKSMFNDVIKDVEKYMYLFEFSRAL 413

Query: 366 QALHKLARESTKNHD 380
           + + K      K  D
Sbjct: 414 ETIWKFISRLNKYID 428


>gi|189054794|dbj|BAG37619.1| unnamed protein product [Homo sapiens]
          Length = 1176

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|189485331|ref|YP_001956272.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287290|dbj|BAG13811.1| leucyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 818

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 57/134 (42%), Gaps = 15/134 (11%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTH 315
             E   N+ +  G + L G  MSKS GN ++ +E++E        + A   RL  +    
Sbjct: 563 HGEPFENL-LTQGMVTLSGSVMSKSKGNIVSPDEIIE-------KYGADTARLFTLFAAP 614

Query: 316 YREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
            ++ +D++++ +      +++ W          + +      ND+     ++ +H+  ++
Sbjct: 615 PQKQLDWSMEGVEGCWRFINRIWRLFDIVHTKTEFSATEKDKNDI-----LRIMHRTIKK 669

Query: 375 STKNHDLLPIFNAS 388
            T + +    FN +
Sbjct: 670 VTVDIEKEFQFNTA 683


>gi|153002892|ref|YP_001377217.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152026465|gb|ABS24233.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 947

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 57/143 (39%), Gaps = 17/143 (11%)

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHY-LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
           +  W+S        W    +A++    LG   D++  G D       + +  S       
Sbjct: 568 DVWWDSGV-----SW----AAVAEKRGLGVPVDLYLEGSDQHRGWFHSSLLTSVATRAHA 618

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               +  H   L+ +G+ MSKS GN +  +E++       + + A ++RL +  + YR+ 
Sbjct: 619 PYRAVLTHGFVLDGQGKAMSKSLGNTVAPDEII-------KKYGADILRLWVSASDYRDD 671

Query: 320 IDFTVQRLTEAEILLSKWPQTST 342
           +  + + ++      +K   T  
Sbjct: 672 VRISSEIVSGLAEGYTKIRNTVR 694



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/129 (14%), Positives = 45/129 (34%), Gaps = 8/129 (6%)

Query: 37  DFAHIGNARPMIVFDVL--YRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
              HIG+A   I+ DV+  YR L+    +    +  +   I+   DK +   +++     
Sbjct: 64  GDIHIGHALNKILKDVVVKYRNLKGEVADYVPGWDCHGLPIELKVDKELGPKKRDMDRAQ 123

Query: 92  INDAISIITSKNTQQFVKDTTRLAC--LAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEA 148
           + +A      K  ++  +   RL             +  +  +++  +      G  Y  
Sbjct: 124 VIEACRAYARKWIERQREAFKRLGVFGRWDDPYTTMSKGYEAEIVRTLARAAEKGFLYRG 183

Query: 149 NNEIIFDTS 157
              + +  +
Sbjct: 184 KKPVYWCVT 192


>gi|114602533|ref|XP_001157096.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 6 [Pan
           troglodytes]
          Length = 1176

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|114602543|ref|XP_001156773.1| PREDICTED: cytosolic leucyl-tRNA synthetase isoform 2 [Pan
           troglodytes]
 gi|114602545|ref|XP_001156952.1| PREDICTED: cytosolic leucyl-tRNA synthetase isoform 4 [Pan
           troglodytes]
 gi|332822249|ref|XP_003310937.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
          Length = 1122

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 610 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 667

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 668 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 697

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 698 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 730


>gi|148994771|ref|ZP_01823842.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|149013148|ref|ZP_01833965.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|168488899|ref|ZP_02713098.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|182684197|ref|YP_001835944.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           CGSP14]
 gi|225858843|ref|YP_002740353.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|237650047|ref|ZP_04524299.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821801|ref|ZP_04597646.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|303256108|ref|ZP_07342128.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303263003|ref|ZP_07348936.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264851|ref|ZP_07350767.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS397]
 gi|303266930|ref|ZP_07352807.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS457]
 gi|303269096|ref|ZP_07354876.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS458]
 gi|238691163|sp|B2IQ55|SYM_STRPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782873|sp|C1C727|SYM_STRP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|31087940|gb|AAO25636.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae]
 gi|147762999|gb|EDK69943.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147927037|gb|EDK78079.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|182629531|gb|ACB90479.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           CGSP14]
 gi|183572547|gb|EDT93075.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|225721595|gb|ACO17449.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|301802052|emb|CBW34784.1| Drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           INV200]
 gi|302596955|gb|EFL64081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302635830|gb|EFL66332.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302641345|gb|EFL71712.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS458]
 gi|302643563|gb|EFL73833.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS457]
 gi|302645539|gb|EFL75770.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
           BS397]
 gi|332073411|gb|EGI83890.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 545

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     HIG+A  ++  D+L R  R    E  V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGTPISIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +E      N ++  I     ++F +   +L 
Sbjct: 60  KE------NKSVKEIADFYHKEFKETFEKLG 84


>gi|55820318|ref|YP_138760.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822208|ref|YP_140649.1| leucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116627157|ref|YP_819776.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|81820359|sp|Q5M1L6|SYL_STRT1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81820521|sp|Q5M657|SYL_STRT2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|122268240|sp|Q03MJ2|SYL_STRTD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|55736303|gb|AAV59945.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738193|gb|AAV61834.1| leucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|116100434|gb|ABJ65580.1| leucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312277634|gb|ADQ62291.1| Leucyl-tRNA synthetase [Streptococcus thermophilus ND03]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.071,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 69/214 (32%), Gaps = 58/214 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIVAENNGGLDKVYNETVKSVTEQIELM--KFNT--AIAQLMVFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI-------------------------SIAIEKL 412
             D L +  A   +  I     HL + +                            IE +
Sbjct: 718 -EDKLYVDYAKGFVQLIAPFAPHLAEELWQTLTATGESISYVAWPTWDESKLVEDEIEIV 776

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           VQ +  +   K   + D  R++L+     L D K
Sbjct: 777 VQIKGKVRA-KLMVAKDLSREELQE--VALADEK 807


>gi|330938265|gb|EGH41928.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIDYMRTQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|325928650|ref|ZP_08189829.1| Isoleucyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540978|gb|EGD12541.1| Isoleucyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 926

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 578 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 630

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 631 ADYSNEMSLSQEILKRNADAYRRLRNTAR 659


>gi|302185150|ref|ZP_07261823.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 868

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIDYMRTQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|242399103|ref|YP_002994527.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|242265496|gb|ACS90178.1| Isoleucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 1070

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 10/88 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   ++++              R 
Sbjct: 598 AASVVAFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEDVIQKDGRDP-------FRF 650

Query: 310 AML--MTHYREPIDFTVQRLTEAEILLS 335
            ML   T + E + F+ + L + + +L+
Sbjct: 651 YMLWATTPW-ENLRFSWKGLAQVKRMLN 677


>gi|228917096|ref|ZP_04080654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228935777|ref|ZP_04098589.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823834|gb|EEM69654.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228842514|gb|EEM87604.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
          Length = 867

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|161507322|ref|YP_001577276.1| isoleucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|172048227|sp|A8YUP7|SYI_LACH4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160348311|gb|ABX26985.1| Isoleucyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 927

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 569 SVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 622 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYDDLRSVDQYME 681

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L +E    +D          +   
Sbjct: 682 VKLNDLIKECLAAYDKFDFTTVFKKVFNF 710


>gi|149377782|ref|ZP_01895515.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357954|gb|EDM46443.1| isoleucyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 939

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + +     +  H   ++ +GRKMSKS GN I   E++           A ++RL +
Sbjct: 580 SIAMNGVAPYKQVLTHGFTVDGKGRKMSKSLGNVIAPQEVMNELG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  +   L +      +   T+ 
Sbjct: 633 SATDYSGEMTVSKDILKQTADGYRRIRNTAR 663


>gi|121706923|ref|XP_001271676.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
 gi|119399824|gb|EAW10250.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
          Length = 574

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 48/161 (29%), Gaps = 23/161 (14%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           Y T   +    +         YV  P  Y     H+G+   M++ D+L R       +  
Sbjct: 42  YVTTTSEKVSKKP-------YYVTTPIFYVNAAPHVGHFYTMVIADILKRWQVLLGNKN- 93

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
               + +T  D+      + +  ++            N + F             H  R 
Sbjct: 94  ---AQLLTGTDEH---GMKIQQAALAAGMDTQAFCDMNCKTFEALAKAANIDN-DHFIRT 146

Query: 126 TNHIPQMIYLIQNIIL----HGHAYEANNEIIFDTSSIPNY 162
           T+  P     +Q         G+ Y + +E  +  S    Y
Sbjct: 147 TD--PAHKEAVQYFWEILNHRGYIYTSKHEGWYSVSDETFY 185


>gi|57867200|ref|YP_188890.1| leucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|71153179|sp|Q8CNU8|SYL_STAES RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|71153568|sp|Q5HNF1|SYL_STAEQ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57637858|gb|AAW54646.1| leucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 804

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLII 635

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
           T +  I+  ++ +                  D +T+S   AI  L     E  K +++
Sbjct: 636 TDENSINKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEV 693


>gi|56752183|ref|YP_172884.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|60390662|sp|Q5N006|SYL_SYNP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56687142|dbj|BAD80364.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
          Length = 865

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 47/174 (27%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
                   + Y      Y     H+G+ R   + D + R+ R       V +        
Sbjct: 42  TPEADDRPKFYALSMFPYPSGNLHMGHVRNYTITDAIARVKRRQGF--RVLHAMGWDAFG 99

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   +L  L+       T   P      
Sbjct: 100 LPAENAA------IDRGVQPADWTYQNVAQMREQLKQLG-LSYDWDREVTTCSPDYYRWT 152

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  ++
Sbjct: 153 QWLFLQFFEAGLAYQKEATVNWDPIDQT---VLANEQVDSEGRSWRSGAKVERR 203


>gi|301055965|ref|YP_003794176.1| valyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300378134|gb|ADK07038.1| valyl-tRNA synthetase [Bacillus cereus biovar anthracis str. CI]
          Length = 881

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|260102621|ref|ZP_05752858.1| isoleucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083575|gb|EEW67695.1| isoleucine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 927

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 51/149 (34%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 569 SVAVTGQAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 622 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYDDLRSVDQYME 681

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L +E    +D          +   
Sbjct: 682 VKLNDLIKECLAAYDKFDFTTVFKKVFNF 710


>gi|315231914|ref|YP_004072350.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315184942|gb|ADT85127.1| isoleucyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 1065

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 10/88 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A       ++ +H   L+ +G KMSKS GN I   E+++ +            R 
Sbjct: 598 AASVIAFDTVPYRHVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGR-------DAFRF 650

Query: 310 AML--MTHYREPIDFTVQRLTEAEILLS 335
            ML   T + E + F+ + L + + +L+
Sbjct: 651 YMLWATTPW-ENLRFSWKGLAQVKRMLN 677


>gi|168483129|ref|ZP_02708081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043369|gb|EDT51415.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
          Length = 545

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     HIG+A  ++  D+L R  R    E  V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGTPISIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +E      N ++  I     ++F +   +L 
Sbjct: 60  KE------NKSVKEIADFYHKEFKETFEKLG 84


>gi|146323739|ref|XP_752043.2| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129557560|gb|EAL90005.2| methionyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
          Length = 574

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   M++ D+L R  R   G+K    +   TD         + +  +     
Sbjct: 64  VNAAPHVGHFYTMVITDILKRW-RVLLGDKDAQLLTG-TD-----EHGMKIQQAASAAGM 116

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                   N + F             H  R T+  H   + Y  + +   G+ Y A +E 
Sbjct: 117 DPQAFCDMNCKTFQALAKAANVDY-NHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEG 175

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 176 WYSVSDETFY 185


>gi|94993549|ref|YP_601647.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|122986870|sp|Q1J8Q8|SYL_STRPF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|94547057|gb|ABF37103.1| Leucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 833

 Score = 43.7 bits (102), Expect = 0.072,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I +               AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITEENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|330895573|gb|EGH27881.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 868

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIDYMRTQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|304314728|ref|YP_003849875.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302588187|gb|ADL58562.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 652

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 39/124 (31%), Gaps = 17/124 (13%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GPT     H+G+ R   I  D+  R  R       V +V    +    I  +A  E 
Sbjct: 12  YANGPT-----HLGHLRSTYIPADIYARYRRLRG--DDVLFVCATDEHGTPIAVKAESEG 64

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHA 145
                      + ++  +   +D       +     R T+  H          +   G+ 
Sbjct: 65  LKPI------EVATRYNEMIKRDLEECDI-SFDSFTRTTDDLHYEIAQNFFLKLYEKGYI 117

Query: 146 YEAN 149
           YE +
Sbjct: 118 YEKD 121


>gi|256847984|ref|ZP_05553428.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715044|gb|EEU30021.1| valyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
          Length = 887

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 44/108 (40%), Gaps = 8/108 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ +H    + +GRKMSKS GN I   +++   
Sbjct: 489 TGYDIIFFWVSRMIFQSLEFTGKAPFKNVLLHGLIRDEQGRKMSKSLGNGIDPMDVIA-- 546

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
                 +    +R  ++      + I F+ +++  A   ++K    S 
Sbjct: 547 -----KYGVDALRWFLVTGSTPGQDIRFSYKKMDAAWNFINKIWNASR 589


>gi|217032112|ref|ZP_03437612.1| hypothetical protein HPB128_16g72 [Helicobacter pylori B128]
 gi|298735618|ref|YP_003728143.1| isoleucyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946260|gb|EEC24868.1| hypothetical protein HPB128_16g72 [Helicobacter pylori B128]
 gi|298354807|emb|CBI65679.1| isoleucyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 922

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y+  +  +     + E    K+  T
Sbjct: 637 VAFNDYQNDLRVSQTFFIQTEQHYKKFRNT 666


>gi|91775274|ref|YP_545030.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91775418|ref|YP_545174.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|123451971|sp|Q1H2F4|SYM_METFK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91709261|gb|ABE49189.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91709405|gb|ABE49333.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 692

 Score = 43.3 bits (101), Expect = 0.073,   Method: Composition-based stats.
 Identities = 28/177 (15%), Positives = 57/177 (32%), Gaps = 38/177 (21%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                +   ++ H GFL + G KMSKS G FIT    L+  K          +R      
Sbjct: 321 FSGYRQPTKVFAH-GFLTVNGEKMSKSRGTFITARSYLDHVK------NPEYLRYY---- 369

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
            Y   ++ +++ +    + L  +     S  +     +++      T   I         
Sbjct: 370 -YAAKLNGSMEDID---LNLEDFVARVNSDLVGKYVNIAS-----RTAGFIAKRFDGKLG 420

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK-FSSADY 430
           +   + ++    A+A                  +I +  + R     ++   + AD 
Sbjct: 421 TVGENAVIAELRAAAD-----------------SIRESFENRDTARAVRDIMALADK 460


>gi|326386297|ref|ZP_08207921.1| isoleucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209522|gb|EGD60315.1| isoleucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 945

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 57/157 (36%), Gaps = 39/157 (24%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          I  H   ++ +G KMSKS GN I+  +L+       R + A ++RL  
Sbjct: 615 SCATRGHAPYKAILTHGFTMDAKGMKMSKSLGNTISPLDLM-------RDYGADILRLWA 667

Query: 312 LMT------------------HYREPID---FTVQRL----TEAEILLSKWPQTS----T 342
           L                     YR+  +   + +  L     E  + ++  P+       
Sbjct: 668 LSVDFTEDHRIGKEILAGVADQYRKLRNTFRYLLGALDGFAEEERVAVADMPELERHVLA 727

Query: 343 SKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKN 378
             G +D  +  A+ + D NT   ++AL +   E    
Sbjct: 728 VLGQLDATLRQAIADFDFNT--YVRALTEFCNEDLSA 762


>gi|229020277|ref|ZP_04177046.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229026501|ref|ZP_04182856.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228734809|gb|EEL85449.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228741030|gb|EEL91259.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 544

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE         +  +  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTVKEVADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|167038739|ref|YP_001661724.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300913676|ref|ZP_07130993.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307723309|ref|YP_003903060.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
 gi|166852979|gb|ABY91388.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
 gi|300890361|gb|EFK85506.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
 gi|307580370|gb|ADN53769.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
          Length = 632

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D           +G+L LEG KMSKS GN +   EL
Sbjct: 253 DVHLVGKEIMRFHTIIWPAMLMALDL--PLPKKVFGHGWLILEGGKMSKSKGNVVDPKEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK----- 336
           +         +    +R  +L    +     F+ + L          +   LLS+     
Sbjct: 311 VS-------KYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMI 363

Query: 337 -------WPQTSTSKGIIDPAVLSALY---------NDLNTVSAIQALHKLARESTKNHD 380
                   P+ S  + + D  + +A           + L   +A+  + KL R + K  D
Sbjct: 364 EKYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423


>gi|109946734|ref|YP_663962.1| isoleucyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|123362804|sp|Q17ZG3|SYI_HELAH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|109713955|emb|CAJ98963.1| ileS [Helicobacter acinonychis str. Sheeba]
          Length = 921

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL + 
Sbjct: 586 CILNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLWVA 638

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
              Y+  +  +    T+ E    K+  T
Sbjct: 639 FNDYQNDLRVSQTFFTQTEQHYKKFRNT 666


>gi|322412788|gb|EFY03696.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 833

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T+K I+                     +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLVTTKEIVTENSGTLDKVYNETVKAVTEQIETM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDL 381
            + L
Sbjct: 718 ENQL 721


>gi|311265234|ref|XP_003130553.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 1012

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A R      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 639 SVAARRKSPFKTVVVHGFTLGEKGEKMSKSLGNVIDPDVVINGGQDQSKEPPFGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +  +   L  A   +SK   T
Sbjct: 699 WVAESNVFTEVTISPSVLRAARDDVSKLRNT 729


>gi|308177197|ref|YP_003916603.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744660|emb|CBT75632.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 516

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 60/179 (33%), Gaps = 32/179 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G D+   H     A    A  +          + +GFL+  G KMSKS GN ++ 
Sbjct: 261 DVHVIGKDISRFH-----AIYWPAFLMSAKLPLPKRVMIHGFLHNNGVKMSKSLGNTVSP 315

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE-------------AEILL 334
           ++ +         +    +R   L    +    ++  + +               A+  L
Sbjct: 316 DDFVNR-------YGLDQVRYFFLREVPFGADGNYNHETIVARINGDLANNFGNLAQRSL 368

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           S   +           +  A   D   + A   L ++ RE+    +      A  H+LG
Sbjct: 369 SMVAKNCGGVVPTPAELSEA---DNAILDAAGQLLEINREAYSRQEFSKALEAVWHVLG 424



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 38/126 (30%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  ++  DV+ R  R    +    +    TD         +    +  +    + 
Sbjct: 21  PHIGHAYEVVATDVMARFKRLDGYD---VFFMTGTD-----EHGQKMMQTAEKLEITPAQ 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F      L   +     R T  +H      L + +  +   Y       +  
Sbjct: 73  LAQRNSDAFQSMNDELG-TSYDRFIRTTDADHHAAAQELWRRMEANDDIYLDKYAGWYSV 131

Query: 157 SSIPNY 162
                Y
Sbjct: 132 RDEAFY 137


>gi|262274495|ref|ZP_06052306.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
 gi|262221058|gb|EEY72372.1| methionyl-tRNA synthetase [Grimontia hollisae CIP 101886]
          Length = 678

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 74/201 (36%), Gaps = 45/201 (22%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGAGFRKPT-NVFVH-GYVTVNGAKMSKSKGTFIKASTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +      +R       Y   ++    R+ + ++ L  + Q   S          
Sbjct: 348 ------KHLDPECLRYY-----YAAKLN---NRIDDLDLNLEDFVQRVNSD--------- 384

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA---IE 410
                         ++K+   +++N   +        +L  E  +  L +  + A   I 
Sbjct: 385 -------------IVNKVVNLASRNAGFIN--KRFDGMLSAECAEPALYEEFAAAAERIG 429

Query: 411 KLVQERLILLKMKK-FSSADY 430
            L ++R     +++  + AD 
Sbjct: 430 DLYEKREFSRAIREIMALADK 450


>gi|114602535|ref|XP_001157048.1| PREDICTED: cytosolic leucyl-tRNA synthetase isoform 5 [Pan
           troglodytes]
          Length = 1163

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 651 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 708

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 709 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 738

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 739 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 771


>gi|15621426|dbj|BAB65421.1| 907aa long hypothetical isoleucyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 907

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 76/178 (42%), Gaps = 29/178 (16%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---F 322
           +H   L+ +GR+M KS GN++  +++ E +K+G       V+RL +L        +   F
Sbjct: 443 VHGFMLDEQGREMHKSLGNYVEPSQVTENEKYGR-----DVLRLWLLR---NTTWEDAKF 494

Query: 323 TVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
           + + L + +  L+       +  T  +    DP + +   ++L     I+ L  L+R + 
Sbjct: 495 SWKALDQTKRDLNIIWNVYVFASTYMNLDNFDPRIYN--LDNLKQYLRIEDLWLLSRYNR 552

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA---DYI 431
              ++    N            E  NK  S  I+ + +  L L++ + ++ +   D I
Sbjct: 553 VVKEVKESMNDF-------KVHELANKMTSFIIDDISRFYLRLVRKRAWNESNDPDKI 603


>gi|15965354|ref|NP_385707.1| methionyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307312729|ref|ZP_07592360.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|25009383|sp|Q92PX0|SYM_RHIME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15074534|emb|CAC46180.1| Probable methionyl-tRNA synthetase (methionine--tRNA ligase)
           [Sinorhizobium meliloti 1021]
 gi|306899454|gb|EFN30086.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 516

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    E  V ++    +   K+ + A++E        +   
Sbjct: 20  PHIGHAYELIATDAMARFQRLDGRE--VFFLTGTDEHGQKMQQTAKKE------GISPQE 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
           + ++N+ +F ++  RL   +     R T    H       +  +   G  Y+ +    + 
Sbjct: 72  LAARNSAEF-QNMARLLNASNDDFIRTTEQRHHEASQAIWM-RMGEAGDLYKDSYAGWYS 129

Query: 156 TSSIPNY 162
                 Y
Sbjct: 130 VRDEAYY 136



 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+I  H     A    A  +     ++ H GFL  +G KMSKS GN +    L+
Sbjct: 260 IHVIGKDIIRFHAVYWPAFLMSA-GLPLPKRVFAH-GFLLNKGEKMSKSLGNVVDPFNLV 317

Query: 293 ETKKFGGRSWPAPVIRLAML 312
           E        +    IR   L
Sbjct: 318 E-------HFGLDQIRYFFL 330


>gi|7804450|dbj|BAA95667.1| leucyl tRNA synthetase [Homo sapiens]
          Length = 1176

 Score = 43.3 bits (101), Expect = 0.074,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|322367954|ref|ZP_08042523.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320551970|gb|EFW93615.1| isoleucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 1065

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 72/192 (37%), Gaps = 43/192 (22%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H   L  +GRKMSKS GN ++  E +E          A  +RL +L 
Sbjct: 583 AALDEVPYDEVLMHGWALAEDGRKMSKSIGNIVSPEEAIERHG-------ADPMRLFLLS 635

Query: 314 THYR-EPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTVSA-- 364
            + + E + F+   +   +  L+      ++P         DP       ++++   A  
Sbjct: 636 QNPQGEDMRFSWDEMQNMQRSLNILWNVFRFPLPYMRLDGFDP-------DEVDVQDAET 688

Query: 365 -------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
                  +  L  +  E T++ D      A   +L   V      +++S    ++V+ER+
Sbjct: 689 ELVDEWLLSRLQTVTTEMTEDWDDFRQDKALRTLLDFVV------EDVSRFYIQVVRERM 742

Query: 418 ILLKMKKFSSAD 429
                  +  AD
Sbjct: 743 -------WDEAD 747


>gi|307317213|ref|ZP_07596654.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306897301|gb|EFN28046.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
          Length = 516

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 13/127 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    E  V ++    +   K+ + A++E        +   
Sbjct: 20  PHIGHAYELIATDAMARFQRLDGRE--VFFLTGTDEHGQKMQQTAKKE------GISPQE 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
           + ++N+ +F ++  RL   +     R T    H       +  +   G  Y+ +    + 
Sbjct: 72  LAARNSAEF-QNMARLLNASNDDFIRTTEQRHHEASQAIWM-RMGEAGDLYKDSYAGWYS 129

Query: 156 TSSIPNY 162
                 Y
Sbjct: 130 VRDEAYY 136



 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+I  H     A    A  +     ++ H GFL  +G KMSKS GN +    L+
Sbjct: 260 IHVIGKDIIRFHAVYWPAFLMSA-GLPLPKRVFAH-GFLLNKGEKMSKSLGNVVDPFTLV 317

Query: 293 ETKKFGGRSWPAPVIRLAML 312
           E        +    IR   L
Sbjct: 318 E-------HFGLDQIRYFFL 330


>gi|159125043|gb|EDP50160.1| methionyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 574

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   M++ D+L R  R   G+K    +   TD         + +  +     
Sbjct: 64  VNAAPHVGHFYTMVITDILKRW-RVLLGDKDAQLLTG-TD-----EHGMKIQQAASAAGM 116

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                   N + F             H  R T+  H   + Y  + +   G+ Y A +E 
Sbjct: 117 DPQAFCDMNCKTFQALAKAANVDY-NHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEG 175

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 176 WYSVSDETFY 185


>gi|312870463|ref|ZP_07730583.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
 gi|311094020|gb|EFQ52344.1| valine--tRNA ligase [Lactobacillus oris PB013-T2-3]
          Length = 883

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW    SA    Y      +   G D+IF      I QS          N+ +H    + 
Sbjct: 466 GWPDTDSADFKRYFPTNTLV--TGYDIIFFWVSRMIFQSLEFTGKAPFKNVLLHGLIRDE 523

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   +++       + +    +R  ++      + I F+  ++  A  
Sbjct: 524 QGRKMSKSLGNGIDPMDVI-------KKYGVDALRWFLITGSTPGQDIRFSYIKMDAAWN 576

Query: 333 LLSKWPQTST 342
            ++K    S 
Sbjct: 577 FINKIWNASR 586


>gi|145346883|ref|XP_001417911.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144578139|gb|ABO96204.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 591

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 51/151 (33%), Gaps = 20/151 (13%)

Query: 32  GPT--------VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           GPT        V D  HIG+     V D   R  R    +        +T  D+  ++  
Sbjct: 64  GPTFVTTPIYYVNDQPHIGHVYTSTVADAYARYRRARGEDVFF-----LTGTDEHGLK-- 116

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIIL 141
             E  +         +  +N+Q+F    T     +     R T+  H  Q+  L++ +  
Sbjct: 117 -VEQSAEKRGIEPQALADENSQKFRDVMTAYDI-SFDEFIRTTDDYHERQVRALVKVLQE 174

Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
               Y    E  +D      Y + S+ K  +
Sbjct: 175 KDAVYLGRFEGWYD-EGQEEYYTESKAKELD 204


>gi|108563773|ref|YP_628089.1| isoleucyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|122980437|sp|Q1CRK7|SYI_HELPH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|107837546|gb|ABF85415.1| isoleucyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 920

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y+  +  +     + E    K+  T
Sbjct: 637 VAFNDYQNDLRVSQTFFIQTEQHYKKFRNT 666


>gi|78046846|ref|YP_363021.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|84029578|sp|Q3BW42|SYI_XANC5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78035276|emb|CAJ22921.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 943

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTAR 676


>gi|121730028|ref|ZP_01682440.1| isoleucyl-tRNA synthetase [Vibrio cholerae V52]
 gi|121628232|gb|EAX60751.1| isoleucyl-tRNA synthetase [Vibrio cholerae V52]
          Length = 949

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKSKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|116622455|ref|YP_824611.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116225617|gb|ABJ84326.1| methionyl-tRNA synthetase [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 641

 Score = 43.3 bits (101), Expect = 0.075,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    +  + + R  R    +  +      T  D+      + E  +     
Sbjct: 12  VNAAPHIGHTYTTMAAETIARFKRMQGYDAVM-----FTGTDEH---GQKVERSAEAAGK 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T    ++F +   +L         R T+  H   +  L Q  + +G+ Y+ +   
Sbjct: 64  TPQEFTDTIAREFQQQWEKLNI-RVDRTIRTTDPRHHKVVQRLFQMCMDNGYIYKGSYSG 122

Query: 153 IFDT 156
            +  
Sbjct: 123 QYCV 126


>gi|332364343|gb|EGJ42117.1| leucine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 861

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 637 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 689

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 690 DRVYRLLNSKELVSENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 745

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 746 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGKSISYVAWPTYDESKLVEAEVEIVV 805

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 806 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 835


>gi|328865832|gb|EGG14218.1| leucyl-tRNA synthetase [Dictyostelium fasciculatum]
          Length = 1063

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 65/202 (32%), Gaps = 47/202 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G+DL+  H    +                  NGF+ L G KMSKS+GNF+T+ 
Sbjct: 669 PLDLRVSGIDLVQNHLTFFLYNHATLFPEHHQPRGIRANGFVLLNGEKMSKSSGNFLTLF 728

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E        + A   R+A+                                 G+ D 
Sbjct: 729 DAVE-------KYSADATRVAL----------------------------ADAGDGVEDA 753

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
             L          +A+ AL KL  + T   ++L   +               +   +  I
Sbjct: 754 NFLDK--------TALSALFKLHTQVTWVEEMLLAQDKMYT----GAPTRAQDIVFASEI 801

Query: 410 EKLVQERLILLKMKKFSSADYI 431
            + +++     +  +F  A  I
Sbjct: 802 NRAIKQAEDAYEKSQFREALRI 823


>gi|219670052|ref|YP_002460487.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|254782390|sp|B8FT35|SYI_DESHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219540312|gb|ACL22051.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 922

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 25/172 (14%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M    L    D++  G D       + ++ S  A        +  H   ++ +GRKMSKS
Sbjct: 539 MERKELAWPADLYMEGSDQHRGWFNSSLSTSVAAYGKAPYKAVLTHGFLVDEKGRKMSKS 598

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GN +   ++        +   A ++RL +    Y+  +  + + + +      K   T 
Sbjct: 599 LGNGVDPLQV-------TKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTL 651

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
                    +LS L +              A++     DL  I   +   LG
Sbjct: 652 R-------FLLSNLND-----------FDPAKDRVAYKDLPEIDRWALLQLG 685


>gi|21242008|ref|NP_641590.1| isoleucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|81804098|sp|Q8PN19|SYI_XANAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21107406|gb|AAM36126.1| isoleucyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 943

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTAR 676


>gi|147675239|ref|YP_001216177.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262169981|ref|ZP_06037671.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC27]
 gi|172047695|sp|A5F8Z3|SYI_VIBC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146317122|gb|ABQ21661.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|227012507|gb|ACP08717.1| isoleucyl-tRNA synthetase [Vibrio cholerae O395]
 gi|262021715|gb|EEY40426.1| isoleucyl-tRNA synthetase [Vibrio cholerae RC27]
          Length = 949

 Score = 43.3 bits (101), Expect = 0.076,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN +   ++            A ++RL +
Sbjct: 583 SVAMKSKAPYKEVLTHGFVVDGQGRKMSKSIGNVVAPQDVTNKLG-------ADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 636 ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 666


>gi|332159141|ref|YP_004424420.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331034604|gb|AEC52416.1| isoleucyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 1067

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E++E              R 
Sbjct: 598 AASIVAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGR-------DTFRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + + +   +L+
Sbjct: 651 YMLWA--TNPWENLRFSWKGIEQVRRMLN 677


>gi|325847822|ref|ZP_08170044.1| leucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480840|gb|EGC83893.1| leucine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 802

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 12/137 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L  + +KMSKS GN +  ++++       R + A  +R   M +  +
Sbjct: 561 KEPYKKRTSHGMILGEDHQKMSKSRGNVVNPDDIV-------RDYGADTLRAYEMFIGDF 613

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--AVLSALYNDLNTVSAIQALHKLARE 374
           R    ++ + +      L +           D     L  L N   T+  +   ++  + 
Sbjct: 614 RSTAPWSDEGVKGCRKYLERVFNLYDLVEDGDEYTKELEILIN--QTIKKVSEDYESLKY 671

Query: 375 STKNHDLLPIFNASAHI 391
           +T    L+ + N   +I
Sbjct: 672 NTAIAALMSLLNEMRNI 688


>gi|152991206|ref|YP_001356928.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166231623|sp|A6Q512|SYL_NITSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151423067|dbj|BAF70571.1| leucyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 815

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E    + +  G +  +G KMSKS GN +  +E++         + A   RL +L      
Sbjct: 566 EPFKRL-LTQGMVLKDGAKMSKSKGNTVDPDEIVA-------KFGADTARLFILFAAPPA 617

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
           + ++++   +  A   + ++ + S + 
Sbjct: 618 KELEWSDSAVEGAYRFIKRFFERSQNA 644



 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 33/106 (31%), Gaps = 11/106 (10%)

Query: 13  RKITEFQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F+  +  S  +MYV     Y     H+G+ R   + D + R  R           
Sbjct: 17  KEKNAFEPQENYSKEKMYVLSMFPYPSGRIHMGHVRNYTIGDAIARYYRKTGA------- 69

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
            N+             E+ +I         T +N     K+   L 
Sbjct: 70  -NVLHPIGWDAFGMPAENAAIKHKVHPKKWTYENIDYMRKELDALG 114


>gi|75041188|sp|Q5R614|SYLC_PONAB RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|55732196|emb|CAH92802.1| hypothetical protein [Pongo abelii]
          Length = 1176

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|159107898|ref|XP_001704224.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
 gi|157432280|gb|EDO76550.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
          Length = 582

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 14/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D L R  +    E   TY+   TD +     +   E   +    
Sbjct: 15  VNGKPHIGHVFTTLLADTLKRFRKLQGFE---TYLMTGTD-EHGQKVQQSAEKMGLQPQQ 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH----GHAYEANN 150
               +       F+++      L P    R T  +P+ + +   +       G  Y+   
Sbjct: 71  WCDNMAKTFETYFLENFG----LCPDVFMRTT--MPKHVEMATKLWEKLRTAGLIYKDKY 124

Query: 151 EIIFDTS 157
           E  +  +
Sbjct: 125 EGWYCVA 131


>gi|325697851|gb|EGD39735.1| leucine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 861

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 69/212 (32%), Gaps = 54/212 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 637 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 689

Query: 335 SKWPQTSTSKGIIDPAVLSALYN----------------DLNTVSAIQALHKLARESTKN 378
            +  +  TSK I+      AL                    NT  AI  L      + K 
Sbjct: 690 DRVYRLMTSKEIV-AENSGALDKVYHETVKSVTEQIEEFKFNT--AIAQLMIFVNAANKE 746

Query: 379 HDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLVQ 414
             L        + +    A  L  E+ +                    K +   +E +VQ
Sbjct: 747 EKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVVQ 806

Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
            +  +   K   + D  R++L+     L D K
Sbjct: 807 IKGKVRA-KLVVTKDLSREELQE--IALSDEK 835


>gi|330944522|ref|XP_003306389.1| hypothetical protein PTT_19524 [Pyrenophora teres f. teres 0-1]
 gi|311316121|gb|EFQ85512.1| hypothetical protein PTT_19524 [Pyrenophora teres f. teres 0-1]
          Length = 1448

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 69/223 (30%), Gaps = 42/223 (18%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  ++  G K +  +    D      E A  E             
Sbjct: 135 HLGHLRVYTISDVLARF-KHMQGYKVLHPIG--WDAFGLPAENAAIER-----GVHPEKW 186

Query: 100 TSKNTQQFVKDTTRLACL----------APTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
           T +N +        +              P        H  ++  +   +  HG AY+A 
Sbjct: 187 TLQNIEAMKAQMKEMGGRWDWDAEIRTCDPDFY----KHTQRIFLM---LHQHGLAYQAE 239

Query: 150 NEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWE 205
           + +              +  ++D      R   K  K     + L K     EP     +
Sbjct: 240 SLVNYDPVDQT----VLANEQVDANGFSWRSGAKVEKVMLKQWFL-KIKEFQEPLLKDLD 294

Query: 206 SPWGRGRPGWHIECSAMSSHYLGK------VFDIHGGGLDLIF 242
           +    GR  W  +  AM  +++GK       FDI      + F
Sbjct: 295 ALARDGR--WPEKVLAMQRNWIGKSEGAKLSFDIVSTDSSMRF 335


>gi|312863994|ref|ZP_07724230.1| leucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100407|gb|EFQ58614.1| leucine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 833

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 32/156 (20%), Positives = 54/156 (34%), Gaps = 30/156 (19%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGII--DPAVLSALYN-------------DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+  +   L  +YN               NT  AI  L      + K  
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIELMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
            L   +       G          +++  I + V E
Sbjct: 720 KLYVDYAK-----GFIQLIAPFAPHLAEEIWQTVAE 750


>gi|256751388|ref|ZP_05492267.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749770|gb|EEU62795.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
          Length = 632

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 63/180 (35%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D           +G+L LEG KMSKS GN +   EL
Sbjct: 253 DVHLVGKEIMRFHTIIWPAMLMALDL--PLPKKVFGHGWLILEGGKMSKSKGNVVDPKEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK---WP 338
           +         +    +R  +L    +     F+ + L          +   LLS+     
Sbjct: 311 VS-------KYGVDAVRYFLLREVPFGADGVFSNETLINRINSDLANDLGNLLSRTVTMI 363

Query: 339 QTSTSKGIIDPAVLSALYNDL-NTV-----------------SAIQALHKLARESTKNHD 380
           +      +  P+    + +DL NT                  +A+  + KL R + K  D
Sbjct: 364 EKYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423


>gi|295399580|ref|ZP_06809562.1| leucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109865|ref|YP_003988181.1| leucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294979046|gb|EFG54642.1| leucyl-tRNA synthetase [Geobacillus thermoglucosidasius C56-YS93]
 gi|311214966|gb|ADP73570.1| leucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 805

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 13/137 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 557 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDDIIESHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++ + L  A   L + W       G ++P ++     D  T+   +  H+  ++ 
Sbjct: 610 EASIAWSTKGLDGARRFLERVWRLFVDENGELNPKIVDNPETD--TLE--RVYHQTVKKV 665

Query: 376 TKNHDLLPIFNASAHIL 392
           T++++ L    A + ++
Sbjct: 666 TEDYEALRFNTAISQLM 682


>gi|89895628|ref|YP_519115.1| isoleucyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|123091718|sp|Q24TH1|SYI_DESHY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89335076|dbj|BAE84671.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 922

 Score = 43.3 bits (101), Expect = 0.077,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 25/172 (14%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M    L    D++  G D       + ++ S  A        +  H   ++ +GRKMSKS
Sbjct: 539 MERKELAWPADLYMEGSDQHRGWFNSSLSTSVAAYGKAPYKAVLTHGFLVDEKGRKMSKS 598

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
            GN +   ++        +   A ++RL +    Y+  +  + + + +      K   T 
Sbjct: 599 LGNGVDPLQV-------TKEMGADILRLWVCAADYKNDVAVSPRIMKQMSEAYRKIRNTL 651

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
                    +LS L +              A++     DL  I   +   LG
Sbjct: 652 R-------FLLSNLND-----------FDPAKDRVAYKDLPEIDRWALLQLG 685


>gi|126725543|ref|ZP_01741385.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
 gi|126704747|gb|EBA03838.1| isoleucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
          Length = 968

 Score = 43.3 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I    ++       + + A ++RL 
Sbjct: 624 QSVGTTGRAPYRNVVTHGFTLDEKGMKMSKSIGNTIVPETIV-------KQYGADILRLW 676

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 677 VAQTDYTADQRIGAEILKGTADSYRRLRNT 706


>gi|19745338|ref|NP_606474.1| leucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|32171569|sp|Q8P2T2|SYL_STRP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19747441|gb|AAL96973.1| putative leucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
          Length = 833

 Score = 43.3 bits (101), Expect = 0.078,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I+                AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLVTTKEIVAENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|328474598|gb|EGF45403.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
          Length = 688

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 30/192 (15%), Positives = 64/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L+
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLD 353

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 354 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 398

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L ++             A    +  +      A   +  + +   +
Sbjct: 399 SRNAGFIAKRFEGKLSDNFAEPELYNEFVAAADRIAELFEAREFGRAIREVTALADKANQ 458

Query: 400 HLNKNISIAIEK 411
           ++++     + K
Sbjct: 459 YVDEKAPWVVAK 470


>gi|323706295|ref|ZP_08117861.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
 gi|323534347|gb|EGB24132.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
           LX-11]
          Length = 635

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D           +G+L LEG KMSKS GN +   EL
Sbjct: 253 DVHLVGKEIVRFHTIIWPAMLMALDL--PLPKKVFGHGWLILEGGKMSKSKGNVVDPKEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK----- 336
           +         +    IR  +L    +     F+ + L          +   LLS+     
Sbjct: 311 VS-------KYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSRTVTMV 363

Query: 337 -------WPQTSTSKGIIDPAVLSALY---------NDLNTVSAIQALHKLARESTKNHD 380
                   P+ S    + D  +  A           + L   +A+  + KL   + K  D
Sbjct: 364 EKYFDGVVPEVSDKDDVDDELISIANNLPKVVESYMDKLQFSNALAEIWKLVGRANKYID 423


>gi|312622414|ref|YP_004024027.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
 gi|312202881|gb|ADQ46208.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 920

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  +++         + A ++RL  
Sbjct: 576 AVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIIN-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  +   + +   +  K   T+ 
Sbjct: 629 VSADYTTDMRISKDIIKQLTEIYRKIRNTAR 659


>gi|293391011|ref|ZP_06635345.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951545|gb|EFE01664.1| leucyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 862

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 43/154 (27%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND---- 358
              +  A+  L++          + +K  ++P  LSA               + +D    
Sbjct: 660 ESGVEGAKRFLARVWNLVFEYNKNPAKTPLNPTALSAAQKALCRDVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
              NT  AI A+ +L  + T+         A   
Sbjct: 720 QTFNT--AIAAIMELMNKLTRAPLDDEQDRAMMA 751


>gi|260433438|ref|ZP_05787409.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417266|gb|EEX10525.1| arginyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
          Length = 581

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 68/398 (17%), Positives = 122/398 (30%), Gaps = 90/398 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +  D L  LL Y   +    Y  N       ++ R+  E      
Sbjct: 133 PT--GPLHVGHTRGAVFGDALASLLAYSGHDVTREYYINDGGAQVDVLARSAYERYREAN 190

Query: 93  NDAISIITSKNTQQFV----KDT-----TRLACLA-----PTHQPRATNHIPQMIYLIQN 138
             +  I        ++    +         L            +  AT     M+ LI+ 
Sbjct: 191 GLSPEIAEGLYPGDYLIPIGEALKEKYGDSLLDKPESEWLAEVREFATEA---MMDLIRA 247

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----RVPEKYHKKNPADF--- 191
            +    A     ++ F   S+   G      ++           V E    K P D+   
Sbjct: 248 DLK---ALGVEMDVFFSEKSLYGTGKI-EAALEALNEKGLIYQGVLEPPKGKKPEDWEPR 303

Query: 192 --ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HGGGLD 239
              L++ +   +   + P  +    W      ++ HY         + D+    HGG + 
Sbjct: 304 EQTLFRSTAHGDDV-DRPVKKSDGSWTYFAPDIAYHYDKVTRGFDALIDVFGADHGGYVK 362

Query: 240 LIFPHHENEIAQSCCADRIEKT-------ANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
            +      + A S  +D              +W +         KMSK  GNF+T+ +++
Sbjct: 363 RM------KAAVSALSDGKVPLDIKLTQLVKLWKNGEPF-----KMSKRAGNFVTLRDVV 411

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR-LTEAEIL---------------LSK 336
           +            V R  ML      P+DF   + L ++                  L +
Sbjct: 412 DQVG-------PDVTRFVMLTRKNDAPLDFDFDKVLEQSRENPVFYVQYAHARVMSVLRR 464

Query: 337 WPQT--STSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
             +     S   +  A L+AL +     + +    KLA
Sbjct: 465 AAEAGIDVSDETLRGADLAALDH----PAELTVARKLA 498


>gi|223939734|ref|ZP_03631606.1| isoleucyl-tRNA synthetase [bacterium Ellin514]
 gi|223891605|gb|EEF58094.1| isoleucyl-tRNA synthetase [bacterium Ellin514]
          Length = 942

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 50/132 (37%), Gaps = 5/132 (3%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D      ++ +  S   + +     +  H   ++ +  K+SKS        E 
Sbjct: 572 DVYLEGSDQHRGWFQSSLLLSLAGNSVPPFKTVLTHGFMVDADREKISKSKQ-GQGGYEK 630

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGII 347
            +T +   + + A V+RL +    YR  I  + +R+ +          T     ++    
Sbjct: 631 PQTAEAYVKKYGADVVRLWVASQDYRNDIVVSEERVNKVSETYRGIRNTLRYQLSNLYDF 690

Query: 348 DPAVLSALYNDL 359
           DPA  +   + L
Sbjct: 691 DPAKHTVADDKL 702


>gi|163790528|ref|ZP_02184957.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159874131|gb|EDP68206.1| isoleucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 746

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 41/139 (29%), Gaps = 16/139 (11%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA------ 83
           GP  Y     HIG+A   I  D++ R                  D     IE+A      
Sbjct: 55  GP-PYANGNIHIGHALNKISKDIIVRYKSMSGFRSPYVPGW---DTHGLPIEQALTNKGV 110

Query: 84  -RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNI 139
            R+E               +   +  +D  RL        P  T    +    I +   +
Sbjct: 111 KRKEMSIAEFRQLCEEYAWEQVNKQKEDFKRLGVAGEWDYPYVTLTKEYEEAQIRVFGKM 170

Query: 140 ILHGHAYEANNEIIFDTSS 158
              G+ Y+    I +  SS
Sbjct: 171 AEKGYIYKGLKPIYWSPSS 189


>gi|149246664|ref|XP_001527757.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146447711|gb|EDK42099.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 993

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA-PVIRLAML 312
             D       +  H    + +G+KMSKS GN  +  E +E  K     +     +RL + 
Sbjct: 633 VFDAKAPFKTVITHGFITDGKGQKMSKSKGNIFSPKEAIEGCKKPLTPYLGTDGLRLWVA 692

Query: 313 MTHYREPIDFTVQRLT 328
            ++Y++ + F  + L 
Sbjct: 693 SSNYKQDVSFNPEILN 708


>gi|146296917|ref|YP_001180688.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|166200200|sp|A4XKR2|SYI_CALS8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145410493|gb|ABP67497.1| Isoleucyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 920

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  +++         + A ++RL  
Sbjct: 576 AVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIIN-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  +   + +   +  K   T+ 
Sbjct: 629 VSADYTTDMRISKDIIKQLTEIYRKIRNTAR 659


>gi|317013188|gb|ADU83796.1| isoleucyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 920

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCVLNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y+  +  +     + E    K+  T
Sbjct: 637 VAFNDYQNDLRVSQTFFIQTEQHYKKFRNT 666


>gi|311029946|ref|ZP_07708036.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 922

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I  H   L+ EGRKMSKS GN +  ++++           A ++RL +
Sbjct: 569 SVAVTGKAPYKGILSHGFALDGEGRKMSKSLGNVVLPSKVMNQLG-------ADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 ASVDYQSDVRVSDNILKQVAEVYRKIRNT 650



 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 55/180 (30%), Gaps = 26/180 (14%)

Query: 28  MYV--CGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDK 78
           MYV   GP  Y     H+G+A   ++ D + R                T+   I     K
Sbjct: 49  MYVLHDGP-PYANGDIHMGHALNKVLKDFIVRYKSMSGYHAPYVPGWDTHGLPIETALTK 107

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
             +  R+E                   +  +   RL        P  T    +  Q I +
Sbjct: 108 NKKVKRKEMSVADFRKLCEEYAYDQVDRQREQFMRLGVRGDWFNPYITLKPEYEAQQIKV 167

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
              +  +G  Y+    + +  SS             E  +     E   K++P+ ++ +K
Sbjct: 168 FGEMAKNGLIYKGLKPVYWSPSS-------------ESALAEAEIEYQDKRSPSIYVAFK 214


>gi|222529340|ref|YP_002573222.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|254782359|sp|B9MRZ5|SYI_ANATD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222456187|gb|ACM60449.1| isoleucyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 920

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ EG+KMSKS GN I+  +++         + A ++RL  
Sbjct: 576 AVATKGRAPYRIVLTHGFVVDGEGKKMSKSEGNVISPFDIIN-------EFGADILRLWC 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   Y   +  +   + +   +  K   T+ 
Sbjct: 629 VSADYTTDMRISKDIIKQLTEIYRKIRNTAR 659


>gi|110004341|emb|CAK98679.1| probable arginyl-trna synthetase protein [Spiroplasma citri]
          Length = 557

 Score = 43.3 bits (101), Expect = 0.079,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT   F HIG+AR   + D + R+LR         Y  N  D  ++I   A     S   
Sbjct: 126 PT--GFLHIGHARNCAIGDSVARILRAAGYHVQTEYYVN--DAGNQINTLAVTVFVSYLN 181

Query: 93  NDAISIITSKNTQQFVKDT 111
                  T      +  D 
Sbjct: 182 LLGKK--TELPADAYRGDM 198


>gi|319940223|ref|ZP_08014575.1| leucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319810525|gb|EFW06861.1| leucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 833

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 53/146 (36%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVER-------YGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I+                AV   L     NT  AI  L      + K  
Sbjct: 662 DRVYRLLTTKEIVAENSGALDKVYNQTVKAVTEQLEELKFNT--AIAQLMVFVNAANK-E 718

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
           D L +  A   +  +     HL++ +
Sbjct: 719 DKLFVSYAKGFVQLLAPFAPHLSEEL 744


>gi|237734721|ref|ZP_04565202.1| isoleucyl-tRNA synthetase [Mollicutes bacterium D7]
 gi|229382049|gb|EEO32140.1| isoleucyl-tRNA synthetase [Coprobacillus sp. D7]
          Length = 909

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 10/117 (8%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        +  H   L+ +G KMSKS GN +   +L+         + A ++RL    
Sbjct: 570 AAHGCAPYKTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVN-------QYGADIVRLWATS 622

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
             Y++ +  +   + +      K   T             A   DL  V A+  + K
Sbjct: 623 VAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA---DLVAVEALADVDK 676


>gi|218889730|ref|YP_002438594.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
 gi|226695264|sp|B7V9C9|SYL_PSEA8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218769953|emb|CAW25715.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
          Length = 873

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 42/145 (28%), Gaps = 21/145 (14%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
             +F  +      M+   P      H+G+ R   + DV+ R  R           RN+  
Sbjct: 32  KEKFYCL-----SMF---PYPSGKLHMGHVRNYTIGDVISRYHRMQG--------RNVLQ 75

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
                      E+ ++  N A +  T  N          L  LA       T   P    
Sbjct: 76  PMGWDAFGMPAENAAMKNNVAPAAWTYDNIAYMKSQLDSLG-LAIDWSREVTTCKPDYYR 134

Query: 135 LIQ----NIILHGHAYEANNEIIFD 155
             Q     +   G  Y  N  + +D
Sbjct: 135 WEQWLFTRLFEKGVIYRKNGTVNWD 159


>gi|167755754|ref|ZP_02427881.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
 gi|167704693|gb|EDS19272.1| hypothetical protein CLORAM_01269 [Clostridium ramosum DSM 1402]
          Length = 901

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 10/117 (8%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        +  H   L+ +G KMSKS GN +   +L+         + A ++RL    
Sbjct: 562 AAHGCAPYKTVLSHGFVLDGKGNKMSKSLGNTVDPIKLVN-------QYGADIVRLWATS 614

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
             Y++ +  +   + +      K   T             A   DL  V A+  + K
Sbjct: 615 VAYQQDVRISNDIMKQISENYRKIRNTMRFVLGNLNDFKQA---DLVAVEALADVDK 668


>gi|154250197|ref|YP_001411022.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|171769399|sp|A7HN82|SYL_FERNB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154154133|gb|ABS61365.1| leucyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 819

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 44/115 (38%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 526 PVDQYIGGVEHAVLHLLYSRFITKVLHDLGYLKFDEPFENLFT-QGMIYKDGWKMSKSKG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N ++ ++++         + A  +R+ +L M    +  ++    +      + + 
Sbjct: 585 NVVSPDDMIN-------KYGADTLRMYILFMAPPEKDAEWNDAGIDGVNRFIKRL 632


>gi|15599182|ref|NP_252676.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|107103505|ref|ZP_01367423.1| hypothetical protein PaerPA_01004575 [Pseudomonas aeruginosa PACS2]
 gi|254236880|ref|ZP_04930203.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|254242673|ref|ZP_04935995.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|14285775|sp|Q9HX33|SYL_PSEAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|9950178|gb|AAG07374.1|AE004816_10 leucyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
 gi|126168811|gb|EAZ54322.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
 gi|126196051|gb|EAZ60114.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 873

 Score = 43.3 bits (101), Expect = 0.080,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 42/145 (28%), Gaps = 21/145 (14%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
             +F  +      M+   P      H+G+ R   + DV+ R  R           RN+  
Sbjct: 32  KEKFYCL-----SMF---PYPSGKLHMGHVRNYTIGDVISRYHRMQG--------RNVLQ 75

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
                      E+ ++  N A +  T  N          L  LA       T   P    
Sbjct: 76  PMGWDAFGMPAENAAMKNNVAPAAWTYDNIAYMKSQLDSLG-LAIDWSREVTTCKPDYYR 134

Query: 135 LIQ----NIILHGHAYEANNEIIFD 155
             Q     +   G  Y  N  + +D
Sbjct: 135 WEQWLFTRLFEKGVIYRKNGTVNWD 159



 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++        + A   RL M+      P    ++++   +  A 
Sbjct: 631 EKMSKSKNNGVDPQSMID-------QYGADTCRLFMMFA---SPPDMSLEWSDAGVEGAN 680

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +      S G+     ++AL +    V   +A+H   R+++++      FN A
Sbjct: 681 RFLRRVWRLAHAHVSAGLPGALDVAALSDAQKQVR--RAIHLAIRQASQDVGQHHKFNTA 738

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQE 415
            A ++ +    E    N       L+QE
Sbjct: 739 IAAVMTLMNVLEKA-PNQDAQDRALIQE 765


>gi|264676997|ref|YP_003276903.1| isoleucyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262207509|gb|ACY31607.1| isoleucyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 951

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 80/288 (27%), Gaps = 71/288 (24%)

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L        PR    I Q   +I+         +   E     S+             E 
Sbjct: 505 LHVDTGALHPRTMEIIDQAAAMIE---------QGGIEAWSRVST-------------ED 542

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            +G    + Y K               E  ++S    G   WH     +   +     D 
Sbjct: 543 ILGAEEAKHYTKSTDIL----------EVWFDS----GSTFWH----VLRGTHPEHHHD- 583

Query: 234 HGGGLDLIFPHHENEIA-------QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           HG   DL    H+            +           +  H   ++ +G+KMSKS GN +
Sbjct: 584 HGPEADLYLEGHDQHRGWFHSSLLLASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTV 643

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
              ++            A +IRL +  T Y   +    + L        +   T      
Sbjct: 644 APQDVSSKMG-------AEIIRLWVASTDYSGDLGIDDKILARVVDAYRRIRNTLR---- 692

Query: 347 IDPAVLSALYNDLNTVS-AIQAL-------HKLARESTKNHDLLPIFN 386
                L A  +D +    A+            LAR +    ++L  + 
Sbjct: 693 ----FLLANTSDFDASKDAVAYGEMLEIDQFALARSAQLQQEILAHYK 736


>gi|226330823|ref|ZP_03806341.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198]
 gi|225201618|gb|EEG83972.1| hypothetical protein PROPEN_04744 [Proteus penneri ATCC 35198]
          Length = 541

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FIT    L+
Sbjct: 157 HFIGKDIVYFHSLFWPAMLEGSEYRKPT-NLFVH-GYVTVNGAKMSKSRGTFITARAYLD 214

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 215 -------HFDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNSDIVNKVVNLASRTAGF 265

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L + L+     Q    +     ++ +      A   I+ + +    ++++  
Sbjct: 266 ISKRFDGKLADSLDDAKLYQHFVDMKETIAQSFENREFGKAVREIMALADEANRYIDEKA 325

Query: 406 SIAIEK 411
              + K
Sbjct: 326 PWVVAK 331


>gi|298493101|ref|YP_003723278.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298235019|gb|ADI66155.1| isoleucyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 960

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 55/139 (39%), Gaps = 6/139 (4%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D      ++ +  S   + I     +  H   L+ +GRKMSKS GN +
Sbjct: 564 LGYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEQGRKMSKSVGNVV 623

Query: 287 TINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
               ++       +   + A V+RL +    Y   +    + + +   + +K   T+   
Sbjct: 624 DPQVIINGGSNQNQQPAYGADVLRLWVSSVDYSGDVRLGSKIIKQLADVRNKIRNTARFL 683

Query: 343 --SKGIIDPAVLSALYNDL 359
             S    DP      ++DL
Sbjct: 684 LGSLHDFDPKQDGVAFDDL 702


>gi|194374553|dbj|BAG57172.1| unnamed protein product [Homo sapiens]
          Length = 1149

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 637 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 694

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 695 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 724

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 725 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 757


>gi|119582254|gb|EAW61850.1| leucyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
          Length = 1093

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 581 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 638

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 639 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 668

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 669 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 701


>gi|296387484|ref|ZP_06876959.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
          Length = 873

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 42/145 (28%), Gaps = 21/145 (14%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
             +F  +      M+   P      H+G+ R   + DV+ R  R           RN+  
Sbjct: 32  KEKFYCL-----SMF---PYPSGKLHMGHVRNYTIGDVISRYHRMQG--------RNVLQ 75

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
                      E+ ++  N A +  T  N          L  LA       T   P    
Sbjct: 76  PMGWDAFGMPAENAAMKNNVAPAAWTYDNIAYMKSQLDSLG-LAIDWSREVTTCKPDYYR 134

Query: 135 LIQ----NIILHGHAYEANNEIIFD 155
             Q     +   G  Y  N  + +D
Sbjct: 135 WEQWLFTRLFEKGVIYRKNGTVNWD 159



 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++        + A   RL M+      P    ++++   +  A 
Sbjct: 631 EKMSKSKNNGVDPQSMID-------QYGADTCRLFMMFA---SPPDMSLEWSDAGVEGAN 680

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +      S G+     ++AL +    V   +A+H   R+++++      FN A
Sbjct: 681 RFLRRVWRLAHAHVSAGLPGALDVAALNDAQKQVR--RAIHLAIRQASQDVGQHHKFNTA 738

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQE 415
            A ++ +    E    N       L+QE
Sbjct: 739 IAAVMTLMNVLEKA-PNQDAQDRALIQE 765


>gi|289670397|ref|ZP_06491472.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 943

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTAR 676


>gi|289662725|ref|ZP_06484306.1| isoleucyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 943

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 595 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTAR 676


>gi|289549304|ref|YP_003474292.1| glutamyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182921|gb|ADC90165.1| glutamyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 469

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 38/122 (31%), Gaps = 29/122 (23%)

Query: 26  IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
           +  +   PT   + H+GNAR  I   +  R            ++  I D D     R R 
Sbjct: 3   VTRFAPSPT--GYLHLGNARTAIFSYLFARH-------HKGKFILRIEDTD-----RERS 48

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                         T +  +  ++D   L         R +  +       + ++  GHA
Sbjct: 49  --------------TKEYEEMLIEDLKWLGLEWDEMY-RQSERLDIYHQYAEKLVEQGHA 93

Query: 146 YE 147
           Y 
Sbjct: 94  YP 95


>gi|253998809|ref|YP_003050872.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4]
 gi|253985488|gb|ACT50345.1| methionyl-tRNA synthetase [Methylovorus sp. SIP3-4]
          Length = 678

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 55/153 (35%), Gaps = 29/153 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                +   I+ H GFL + G KMSKS G FIT    L+  K          +R      
Sbjct: 310 YSGHRQPTQIFAH-GFLTVNGEKMSKSRGTFITAGSYLQHVK------NPEYLRYY---- 358

Query: 315 HYREPIDFTVQ----RLTEAEILLSK------WPQTSTSKGIIDPAV---LSALYNDLNT 361
            Y   ++ +++     L +    ++           S + G I       L+AL ++   
Sbjct: 359 -YAAKLNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLAALADN--- 414

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
            + I  L + A    + ++      A   I+ +
Sbjct: 415 -AVITELRQAASSIAECYNTRDYGRALREIMAL 446


>gi|187251551|ref|YP_001876033.1| isoleucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186971711|gb|ACC98696.1| Isoleucyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 942

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I  H   L+  G  M KS GN +  +E+ +        + A ++RL +
Sbjct: 583 SVALEGKSPFRQILTHGFVLDQHGHAMHKSLGNSVEPHEVFD-------KYGADILRLWV 635

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            ++ Y++ I  + + L+       +   T
Sbjct: 636 SLSDYQDDIRISDEILSGPVDSYRRLRNT 664


>gi|86606359|ref|YP_475122.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554901|gb|ABC99859.1| isoleucyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 936

 Score = 43.3 bits (101), Expect = 0.081,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 13/143 (9%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D      ++ +  S   +       +  H   L+ +G+KMSKS GN I
Sbjct: 556 LGYPVDLYLEGSDQHRGWFQSSLLTSVAVNGQAPYKAVLTHGFVLDEKGQKMSKSLGNVI 615

Query: 287 TINELL--ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-----------AEIL 333
               L+   +      ++ A V+RL +    Y   +      L +           A  L
Sbjct: 616 DPLLLINGGSNPQTDPAYGADVLRLWVSSVDYSGDVPIGKTILGQMADVYRKIRNTARFL 675

Query: 334 LSKWPQTSTSKGIIDPAVLSALY 356
           LS     + ++  +    L+ L 
Sbjct: 676 LSNLYDFNPAQDAVPFEALTELD 698


>gi|315657976|ref|ZP_07910850.1| leucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315497012|gb|EFU85333.1| leucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 804

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDDIVNSHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
                +    + +                  D +T++   AI  L     E  K  ++
Sbjct: 636 NEDDSLSQKFVESNNKSLDKVYNQTVKKVTEDFDTLNFNTAISQLMVFINECYKVDEI 693


>gi|294666946|ref|ZP_06732176.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292603318|gb|EFF46739.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 926

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 578 AMDKAAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 630

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 631 ADYSNEMSLSQEILKRNADAYRRLRNTAR 659


>gi|289550486|ref|YP_003471390.1| Leucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180018|gb|ADC87263.1| Leucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 804

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 29/178 (16%), Positives = 54/178 (30%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDDIVNSHG-------ADTLRLYEMFMGPLDAAIAWSENGLDGSRRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
                +    + +                  D +T++   AI  L     E  K  ++
Sbjct: 636 NEDDSLSQKFVESNNKSLDKVYNQTVKKVTEDFDTLNFNTAISQLMVFINECYKVDEI 693


>gi|297568453|ref|YP_003689797.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
 gi|296924368|gb|ADH85178.1| leucyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
          Length = 829

 Score = 43.3 bits (101), Expect = 0.082,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 9/98 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  NEL+E        + A  +RL  +      
Sbjct: 568 EPFTNL-LTQGMVIKDGAKMSKSKGNVVDPNELIE-------QYGADTVRLFSLFAAPPE 619

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
             +++  Q +  A   LS+  +       +  A    L
Sbjct: 620 RDLEWNHQGVEGAFRFLSRIHRFVLDNREMLRAAGEEL 657


>gi|296109335|ref|YP_003616284.1| isoleucyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434149|gb|ADG13320.1| isoleucyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 1024

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN +  ++++E        + A ++R 
Sbjct: 560 ALSAIVFNDIPYKKCLMHGFTLDEHGEKMSKSLGNIVNPDDVVE-------KYGADILRF 612

Query: 310 AMLMT 314
            +L  
Sbjct: 613 YLLSA 617


>gi|169628221|ref|YP_001701870.1| methionyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
 gi|169240188|emb|CAM61216.1| Methionyl-tRNA synthetase (MetG) [Mycobacterium abscessus]
          Length = 523

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   +  D + R  R    +     VR +T  D+  ++ A+            + 
Sbjct: 21  PHIGHAYEYVATDAVARFKRLDGFD-----VRYLTGTDEHGLKVAQTAAA---AGIPTAQ 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +   N+  F      L   +     R T  +H      + + +  +G  Y       +  
Sbjct: 73  LARHNSDVFEALQRTLNI-SFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTYSGWYSV 131

Query: 157 SSIPNY 162
                Y
Sbjct: 132 RDEAYY 137


>gi|75764295|ref|ZP_00743834.1| Class 1 lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74488218|gb|EAO51895.1| Class 1 lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 517

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 108/372 (29%), Gaps = 61/372 (16%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R +I    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIITTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLAC----LAPT 120
             R +    D    +     P   I D     +       ++F K           +   
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIGVEFIYQH 127

Query: 121 HQPRATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGS--FSRR 168
            + R+  +   ++           I      G   E         T      G    +  
Sbjct: 128 DEYRSGRYNENILEALYKRKDIYNILMDFKTGECSEEERESFYPATLYCERCGKDTTTIT 187

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
             DE     R   +   +     +    +  M+  W+  W      W IE          
Sbjct: 188 HFDEVLKTIRYECECGNEKELSVL---NTNKMKLNWKIDWPMR---WMIEEVVFEP---- 237

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFI 286
                  GG D         +++        + A  ++   F+ ++G   KMS S+GN I
Sbjct: 238 -------GGRDHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSI 290

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTS 343
           T +ELL       + +   VI        YR    F     + +        +   +  +
Sbjct: 291 TPSELL-------KVYLPEVILFMF--AKYRPNAAFHIGLDEDVIRNYTEYERLKDSYEN 341

Query: 344 KGIIDPAVLSAL 355
           K + +  +L A+
Sbjct: 342 KTLKNEDLLDAI 353


>gi|114602537|ref|XP_001156710.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 1 [Pan
           troglodytes]
          Length = 1149

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 637 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 694

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 695 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 724

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 725 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 757


>gi|52080145|ref|YP_078936.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52785521|ref|YP_091350.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319646076|ref|ZP_08000306.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825316|sp|Q65JV7|SYI_BACLD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|52003356|gb|AAU23298.1| isoleucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52348023|gb|AAU40657.1| IleS [Bacillus licheniformis ATCC 14580]
 gi|317391826|gb|EFV72623.1| isoleucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 922

 Score = 43.3 bits (101), Expect = 0.083,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 16/163 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I+ +           +  H   L+ EGRKMSKS GN +   +++         + A ++R
Sbjct: 566 ISTAVAVTGKAPYKGVLSHGFALDGEGRKMSKSLGNVVVPAKIMN-------QFGADILR 618

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS- 363
           L +    Y+  +  +   L +   +  K   T      +    DPA  +    DL  V  
Sbjct: 619 LWVASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLHGNIADFDPAKDAIAVEDLREVDQ 678

Query: 364 ----AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                + +L +  +++ + +D   I++A  +   IE+   +++
Sbjct: 679 YILIKLNSLIEKVKKAYEEYDFAVIYHAVHNFCAIELSSFYMD 721


>gi|258592110|emb|CBE68415.1| leucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
          Length = 864

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 48/153 (31%), Gaps = 43/153 (28%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A SCC           +  G +     KMSKS  N +   +LL         + A   R+
Sbjct: 596 ASSCCRACGRP-----VKIGRI----EKMSKSKKNVVDPEDLLT-------QYGADTARI 639

Query: 310 AML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------------ 350
             L        ++++ Q +  +   L +  +    +  +                     
Sbjct: 640 FCLFAAPPERDLEWSDQGVEGSFRFLCRIVRLIEDQEALLKEPNPSIAFQKLIAGRALYR 699

Query: 351 --------VLSALYNDLNTVSAIQALHKLARES 375
                   V   + +D +  +AI AL +LA E 
Sbjct: 700 KAQQTIKRVTEDIEDDFHFNTAISALMELANEI 732


>gi|237747479|ref|ZP_04577959.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
 gi|229378830|gb|EEO28921.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
          Length = 970

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 12/118 (10%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I   ++ +T         A ++RL +  T Y   +  + + 
Sbjct: 631 HGFVVDGEGRKMSKSMGNVIAPQKVFDTLG-------ADILRLWVASTDYSGELSISDEI 683

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
           L        +   T            +          AI  L ++ R +  +   L  
Sbjct: 684 LKRVTESYRRIRNTLRFLLSNTADFDATRD-----AVAIDELLEVDRYALASMKSLQT 736


>gi|145591703|ref|YP_001153705.1| valyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|145283471|gb|ABP51053.1| valyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 799

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 14/130 (10%)

Query: 33  PTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV--RNITDIDDKIIER---AR 84
           P  Y   +  HIG       FD++ R LR    +    +   RN   I+ ++ ++     
Sbjct: 43  PPPYLSSNRPHIGQTASYAHFDMIARFLRMRGIDVIFPFYADRNGLPIEVQVEKKYGIVA 102

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII---- 140
            E P             +   +FV    R   L+  + P  T+  P+   + Q+      
Sbjct: 103 HEVPREKFIQMCKEELDRYEGEFVASLRRWG-LSFDYWPNGTDS-PEYRRMTQSTFIELW 160

Query: 141 LHGHAYEANN 150
             G  YEA  
Sbjct: 161 RRGLVYEAER 170


>gi|91782348|ref|YP_557554.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123063115|sp|Q143I7|SYM_BURXL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91686302|gb|ABE29502.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 710

 Score = 43.3 bits (101), Expect = 0.084,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT   ++E
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSVIE 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387



 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 8/84 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         ++ RA +E            
Sbjct: 32  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYVGADDTHGTPVMLRAEKEGL------TPKQ 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +  Q+  +D          + 
Sbjct: 84  LIDRVWQEHKRDFDSFGISFDNYY 107


>gi|332297228|ref|YP_004439150.1| Lysyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332180331|gb|AEE16019.1| Lysyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 534

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 24 SNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           ++ +Y C  G T     HIGN R +I  D++ R LR         Y  +  D+
Sbjct: 26 GDLDVYTCASGITPSGTVHIGNFREIISVDLVVRALRDRGKNVRFIYSWDDYDV 79


>gi|327468643|gb|EGF14122.1| leucine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 861

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 637 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 689

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 690 DRVYRLLNSKELVSENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 745

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 746 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVAWPTYDESKLVEAEVEIVV 805

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 806 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 835


>gi|300214279|gb|ADJ78695.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Lactobacillus salivarius CECT 5713]
          Length = 805

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 14/146 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  ++++E        + A  +RL  M M      I ++ + L  
Sbjct: 570 LGSNHEKMSKSKGNVVNPDDIVE-------QYGADTLRLYEMFMGPLDASIPWSEEGLGG 622

Query: 330 AEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           A   +++ W         +   V +   +DL+     +  ++  ++ T++++ +    A 
Sbjct: 623 AHKFINRVWNLLIDENDNLRDRVTTINNHDLD-----KIYNETVKKVTEDYEAMHFNTAI 677

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQ 414
           + ++         +      +E LV+
Sbjct: 678 SQLMVFVNNAYKADSLPLEYVEGLVK 703


>gi|296162307|ref|ZP_06845101.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295887461|gb|EFG67285.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 710

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT   ++E
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSVIE 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387



 Score = 37.1 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 8/84 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         ++ RA +E            
Sbjct: 32  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYVGADDTHGTPVMLRAEKEGL------TPKQ 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +  Q+  +D          + 
Sbjct: 84  LIDRVWQEHKRDFDSFGISFDNYY 107


>gi|294155496|ref|YP_003559880.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
 gi|291599965|gb|ADE19461.1| leucine--tRNA ligase [Mycoplasma crocodyli MP145]
          Length = 779

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 38/205 (18%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIE------KTANIWIHNGFLNLEGRKMSKSN 282
              D + GG++    H       +   + ++         N+ +  G +  +G KMSKS 
Sbjct: 488 NSVDEYIGGIEHAILHLLYARFFAKVFNDLKLIPYREPFNNL-LTQGMVLKDGSKMSKSK 546

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN +  ++++       + + A V RL +L      + +++    +      L +   T 
Sbjct: 547 GNVVVPSDMI-------KEYGADVTRLFILFAAPPLKELEWIDSGILGCHKFLRRII-TL 598

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG-------- 393
           + K  I          D+N       L+   +E+ +   L      S  I          
Sbjct: 599 SEKFNIKNNFK---NFDIN------QLNSTEKEARRKLYLG--LKKSLEIFEDRRNEYAF 647

Query: 394 ---IEVCKEHLNKNISIAIEKLVQE 415
              I  C E LN    +  EKL+ E
Sbjct: 648 NTIISWCMETLNAYDQVENEKLISE 672


>gi|116052026|ref|YP_789131.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|122261173|sp|Q02SF5|SYL_PSEAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115587247|gb|ABJ13262.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
          Length = 873

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 40/139 (28%), Gaps = 15/139 (10%)

Query: 23  PSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P   + Y      Y     H+G+ R   + DV+ R  R           RN+        
Sbjct: 30  PDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQG--------RNVLQPMGWDA 81

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ--- 137
                E+ ++  N A +  T  N          L  LA       T   P      Q   
Sbjct: 82  FGMPAENAAMKNNVAPAAWTYDNIAYMKSQLDSLG-LAIDWSREVTTCKPDYYRWEQWLF 140

Query: 138 -NIILHGHAYEANNEIIFD 155
             +   G  Y  N  + +D
Sbjct: 141 TRLFEKGVIYRKNGTVNWD 159



 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++        + A   RL M+      P    ++++   +  A 
Sbjct: 631 EKMSKSKNNGVDPQSMID-------QYGADTCRLFMMFA---SPPDMSLEWSDAGVEGAN 680

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +      S G+     ++AL +    V   +A+H   R+++++      FN A
Sbjct: 681 RFLRRVWRLAHAHVSAGLPGALDVAALDDAQKQVR--RAIHLAIRQASQDVGQHHKFNTA 738

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQE 415
            A ++ +    E    N       L+QE
Sbjct: 739 IAAVMTLMNVLEKA-PNQDAQDRALIQE 765


>gi|325969075|ref|YP_004245267.1| leucyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708278|gb|ADY01765.1| leucyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 998

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 38/103 (36%), Gaps = 8/103 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    +         +        N ++  EG KMS+S GN + +       
Sbjct: 618 SGPDLISSHLSFFVFHHVAIFPEKYWPRSITFNEYVIREGMKMSRSLGNVLPL------- 670

Query: 296 KFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKW 337
            +  R + + + RL +   T     +D+    +T      S++
Sbjct: 671 PYIPRKYSSDLARLYLASATDLDSTLDWREDDVTSVASRFSRF 713



 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 22 DPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           P   + +  V  P V    HIG++R   + D++ R  R            +IT
Sbjct: 26 KPGKPKYFITVPYPYVSGSPHIGHSRTYTIGDIIARYKRARGFNVLFPIAWHIT 79


>gi|257463198|ref|ZP_05627597.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060786|ref|ZP_07925271.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313686462|gb|EFS23297.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 646

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 37/125 (29%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +         Y    TD         + E  +     
Sbjct: 13  VNGDPHVGSAYTTIASDVMARYQKLAG---KTVYFLTGTD-----EHGQKVEQTAHEKGF 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                T K    F +    L         R T   H   +  +++ +   G  Y+   E 
Sbjct: 65  TPQAWTDKMAPAFTEMWKALNIKYSDF-IRTTEPRHKNAVKKILKAVYDKGDIYKGEYEG 123

Query: 153 IFDTS 157
            +  S
Sbjct: 124 QYCIS 128


>gi|289581181|ref|YP_003479647.1| lysyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530734|gb|ADD05085.1| lysyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 568

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 59/173 (34%), Gaps = 32/173 (18%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +   +  L+G   S S GN I ++++LE  +         V+R        R   DF+++
Sbjct: 318 MVYEWFTLDGEPFSSSEGNVILVSDVLELLE-------PEVLRYFFAKDPSRA-RDFSIE 369

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
           RL +      ++  T   +         A  +          + +  RE     + + + 
Sbjct: 370 RLDQLVDEFDRFEATYFGEVAEATEDEQAFAD-----RVYPLVVEEVRE-----ERIRLP 419

Query: 386 NASAHILGI----EVCKEHL-------NKNISIAIEKLVQERLILLKMKKFSS 427
              A +LG+    ++ +E         +     A+E+ +           ++ 
Sbjct: 420 YTFAAVLGMTDDPDLREEIARREGHIPDDAPEWAVEQALARVERAR---NWAR 469


>gi|198411713|ref|XP_002127025.1| PREDICTED: similar to cysteinyl-tRNA synthetase, partial [Ciona
           intestinalis]
          Length = 190

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 41/112 (36%), Gaps = 29/112 (25%)

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------------------------LL 334
           +   A  +RLA L+  +++ +D++   + +A                             
Sbjct: 4   KKNSARQLRLAFLLHSWKDTLDYSDNTMHDAVQFEKLMNEFFLTVKDVLRNQPNKGPEAF 63

Query: 335 SKWPQTSTSKGII----DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
            KW Q   +   +      +V +AL ++++T +A+  L +L   S     L 
Sbjct: 64  KKWNQDEMNLAKLFSERQQSVHAALCDNIDTRTALDNLRQLVTASNTYIALK 115


>gi|149927068|ref|ZP_01915326.1| arginyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149824289|gb|EDM83509.1| arginyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 579

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 52/322 (16%), Positives = 100/322 (31%), Gaps = 59/322 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+ R   + D +  +++    +    +  N     I  +   +  RA+   
Sbjct: 133 PT--GPLHVGHGRQAALGDAMAAVMQTQGWKVHKEFYYNDAGVQIQTLATSVQARAKGLK 190

Query: 88  PSIPINDAISIITSKNTQQFVKD-TTRLACLAPTHQP-RATNHIPQMIYLIQNIILHGHA 145
           P   +    S           +D        A   +P + T ++      I+       A
Sbjct: 191 PG-DVEWPESAYNGDYIADIAEDFLAGKEVKAADGEPVKGTGNVDD-FECIRAFA---VA 245

Query: 146 Y-EANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
           Y  A  ++    F  +    Y   S     + +    +     K       LW RST   
Sbjct: 246 YLRAEQDLDLKAFGVNFDQFYLESSLYSEGKVEAAVALMVASGKTFEEGGALWLRSTDYG 305

Query: 202 PGWESPWGRGRPG---------WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA-- 250
              +    +   G         +HI+         GKV +I G        HH   IA  
Sbjct: 306 DDKDRVMRKSEGGYTYFVPDVAYHIQKF---KRGFGKVINIQGTD------HH-GTIARV 355

Query: 251 ----QSCCADRIEKTANIWIHNGFLNL----EGRKMSKSNGNFITINELLETKKFGGRSW 302
               Q+C     +   +  +H   + +    +  K+SK  G+++T+ +L+        + 
Sbjct: 356 RAGLQACNVGIPQGYPDYVLHK-MVTVMKGGQEVKISKRAGSYVTVRDLICWSGGVDETQ 414

Query: 303 PA-----------PVIRLAMLM 313
           P              +R  ++ 
Sbjct: 415 PMLSQPEALTKGRDAVRFFLVS 436


>gi|150396508|ref|YP_001326975.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150028023|gb|ABR60140.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 516

 Score = 43.3 bits (101), Expect = 0.085,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    E  V ++    +   K+ + A++E        +   
Sbjct: 20  PHIGHAYELIATDAMARFQRLDGRE--VFFLTGTDEHGQKMQQTAKKE------GISPQE 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           + ++N+ +F ++  RL   +     R T   H      +   +   G  Y+ +    +  
Sbjct: 72  LAARNSAEF-QNMARLLNASNDDFIRTTEKRHHEASQAIWTRMGEAGDLYKDSYAGWYSV 130

Query: 157 SSIPNY 162
                Y
Sbjct: 131 RDEAYY 136



 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 33/80 (41%), Gaps = 9/80 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+I  H     A    A  +     ++ H GFL  +G KMSKS GN +    L+
Sbjct: 260 IHVIGKDIIRFHAVYWPAFLMSA-GLPLPKRVFAH-GFLLNKGEKMSKSLGNVVDPFNLV 317

Query: 293 ETKKFGGRSWPAPVIRLAML 312
           E        +    IR   L
Sbjct: 318 E-------HFGLDQIRYFFL 330


>gi|326505354|dbj|BAK03064.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1064

 Score = 43.3 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 220 SAMSSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           +A+S+   G  F  D++  G D      ++ +  S         +++  H   L+ +G K
Sbjct: 634 AAVSAKRDGLNFPADVYLEGSDQHRGWFQSSLLTSIATTGKAPYSSVITHGFVLDEDGFK 693

Query: 278 MSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           MSKS GN +   +++   K       + A V+RL +    Y   +    Q L +   +  
Sbjct: 694 MSKSVGNVVDPEKVIVGGKNSKEEPPYGADVLRLWVSSVDYTGDVLIGSQILRQMSDMYR 753

Query: 336 KWPQT 340
           K   T
Sbjct: 754 KLRGT 758


>gi|284052455|ref|ZP_06382665.1| methionyl-tRNA synthetase [Arthrospira platensis str. Paraca]
 gi|291571486|dbj|BAI93758.1| methionyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 534

 Score = 43.3 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 14/96 (14%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+H  G D++  H     A    AD       I+ H GFL  +G+KM KS GN +   
Sbjct: 262 PIDLHLIGKDILRFHAVYWPAMLMSADLPLPG-RIFGH-GFLTKDGKKMGKSLGNTLNPV 319

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           EL+         +    +R   L     + I+F   
Sbjct: 320 ELVN-------QYGTDAVRYYFL-----KEIEFGQD 343


>gi|240047297|ref|YP_002960685.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984869|emb|CAT04862.1| Leucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 793

 Score = 43.3 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 22/135 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLN-LEGRKMSKSN 282
             D++ GG +    H            ++   +  E    I ++ G L   +G KMSKS 
Sbjct: 512 PVDLYIGGQEHAVGHLIYSRFWHKVLYEAGIVNTHEPFFKI-VNQGMLLGSDGSKMSKSK 570

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI----DFTVQRLTEAEILLSKWP 338
           GN I  +E+LE        + A  +RL ++   +  P+    ++    +      L +  
Sbjct: 571 GNVINPDEILEL-------YGADALRLFLM---FMSPLTDVKNWKNSGIKSMYQWLERVY 620

Query: 339 QTSTSKGIIDPAVLS 353
           +  T+    D  +L 
Sbjct: 621 RVITTSYQYDAKLLK 635


>gi|218897552|ref|YP_002445963.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218542751|gb|ACK95145.1| lysyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 517

 Score = 43.3 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 59/375 (15%), Positives = 106/375 (28%), Gaps = 67/375 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    +     P   I D     +       ++F K               
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQH 127

Query: 124 ---RATNHIPQMIYLIQNIILHGHAY-------------EANNEIIFDTSSIPNYGS--F 165
              R+  +   ++     +      Y             E        T      G    
Sbjct: 128 DEYRSGRYNENILE---TLYKRKEIYDILMGFKTGECSEEERESFYPATLYCERCGKDTT 184

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
           +    DE     R   +   +     +    +  M+  W+  W      W IE       
Sbjct: 185 TITHFDEVLKTIRYECECGNEKELSVL---NTNKMKLNWKIDWPMR---WMIEEVVFEP- 237

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNG 283
                     GG D         +++        + A  ++   F+ ++G   KMS S+G
Sbjct: 238 ----------GGRDHSAETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSG 287

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQT 340
           N IT +ELL       + +   VI        YR    F     + +        +   +
Sbjct: 288 NSITPSELL-------KVYLPEVILFMF--AKYRPNAAFHIGLDEDVIRNYTEYERLKDS 338

Query: 341 STSKGIIDPAVLSAL 355
             +K + +  +L A+
Sbjct: 339 YENKTLKNEDLLDAI 353


>gi|160901434|ref|YP_001567016.1| leucyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|238687210|sp|A9C1G8|SYL_DELAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160367018|gb|ABX38631.1| leucyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 911

 Score = 43.3 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 38/143 (26%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y C    Y     H+G+ R   + D+L R LR       V          
Sbjct: 26  VTEDQAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYN--VLMPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A +           +  T  N     K    +  LA           P      
Sbjct: 84  LPAENAALKNKVP------PAQWTYDNIAYMKKQMQAMG-LAIDWSREIATCDPDYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLEKGIAYRKTQVVNWD 159


>gi|85859341|ref|YP_461543.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|85722432|gb|ABC77375.1| isoleucyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 933

 Score = 43.3 bits (101), Expect = 0.086,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              N+  H   ++ EG+KMSKS GN I   ++++       ++ A ++RL +    Y   
Sbjct: 587 PYRNVLTHGFVVDGEGKKMSKSVGNVIESQQIID-------AYGAEILRLWVASEDYTVD 639

Query: 320 IDFTVQRLTEAEILLSKWPQTST 342
           +  + + L        +   TS 
Sbjct: 640 LRISDEILKRLVEAYRRIRNTSR 662


>gi|296133361|ref|YP_003640608.1| isoleucyl-tRNA synthetase [Thermincola sp. JR]
 gi|296031939|gb|ADG82707.1| isoleucyl-tRNA synthetase [Thermincola potens JR]
          Length = 934

 Score = 43.3 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 48/139 (34%), Gaps = 23/139 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS GN I   E++           A ++RL +
Sbjct: 579 SVATTGKAPYKTVLTHGFLVDEQGRKMSKSLGNGIDPLEVINKMG-------ADILRLWV 631

Query: 312 LMTHYREPIDFTVQRLTE-----------AEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   L +           A  +L        +K  +    +  L     
Sbjct: 632 SSADYKADVALSSNILKQMSEAYRKIRNTARYILGNLYDFDPAKDTVPYEQMEELDK--- 688

Query: 361 TVSAIQALHKLARESTKNH 379
              A+  LHKL++     +
Sbjct: 689 --WALLKLHKLSKRVLNAY 705


>gi|222151014|ref|YP_002560167.1| Ile-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254782419|sp|B9EB60|SYI_MACCJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222120136|dbj|BAH17471.1| Ile-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 914

 Score = 43.3 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ +GRKMSKS GN +   +++       +   A +IR
Sbjct: 567 ITTAVATRGKSPYKKLLSHGFVMDGQGRKMSKSLGNTVLPEKVV-------KQMGADIIR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L ++   Y   +  +   L +   +  K   T
Sbjct: 620 LWVMSVDYLADVRISDDILKQVSEVYRKIRNT 651



 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 9/128 (7%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIN 93
            H+G+A   I+ D++ R                   +  I+  + ++   R+        
Sbjct: 63  IHMGHALNKIIKDMIMRYKAMNGYYAPYVPGWDTHGLP-IETALTKKGVDRKSMSEAEFR 121

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANN 150
           +       +  +    D  RL        P  T       + I L  ++   G+ Y+   
Sbjct: 122 ELCRAYALEQIELQKADFKRLGVNGDWENPYITLQEKFEAEQIRLFGDMAAKGYIYKGKK 181

Query: 151 EIIFDTSS 158
            + +  SS
Sbjct: 182 PVYWSPSS 189


>gi|86157740|ref|YP_464525.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774251|gb|ABC81088.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 694

 Score = 43.3 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 66/178 (37%), Gaps = 39/178 (21%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++  H     A    A  +++   + +H G L + G KMSKS G F+T    L+
Sbjct: 300 HFIGKDILRFHAVFWPAMLWAA-GLKRPDRMPVH-GHLTVNGEKMSKSRGTFVTGRTYLD 357

Query: 294 TKKFGGRSWPAPVIRLA----MLMTHYREPIDFTVQRLTE----------------AEIL 333
           +           ++R      +        +D ++                        L
Sbjct: 358 S------GLDPELLRYFYAANLGSGV--SDLDLSLDEFRNRINADLANNVANLASRVAAL 409

Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
           L + P   T+   +DP + +A      T  A++     A ++ +  D++ + + +A +
Sbjct: 410 LQRLPGGVTA--ALDPEIAAA------TREAVKGARG-AYQALEYRDVVRLVSQAASV 458


>gi|51246452|ref|YP_066336.1| leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
 gi|60390691|sp|Q6AJZ7|SYL_DESPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50877489|emb|CAG37329.1| probable leucyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
          Length = 827

 Score = 43.3 bits (101), Expect = 0.087,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 8/80 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  ++L+         + A   RL  +        ++++ 
Sbjct: 574 LTQGMVIKDGTKMSKSKGNVVDPHDLIS-------EFGADTTRLFSLFAAPPERDLEWSS 626

Query: 325 QRLTEAEILLSKWPQTSTSK 344
           + +  +   L++  +  T+ 
Sbjct: 627 EGVEGSSRFLNRIYRFITAN 646



 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 40/131 (30%), Gaps = 18/131 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A++       
Sbjct: 46  PYPSGRIHMGHVRNYTIGDVVARYKRMRGFN--VLHPMGWDAFGLPAENAAQKN------ 97

Query: 93  NDAISIITSKNTQQFVKDTTRLAC------LAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
           N   S+ T  N     +   +L           T  P+   +  +    I+ ++  G  Y
Sbjct: 98  NTHPSVWTYDNIDYMRQQLQQLGLSYDWDREMATCNPK--YYRQEQQLFIE-MLEKGLIY 154

Query: 147 EANNEI-IFDT 156
           E    +   DT
Sbjct: 155 EKVTTVNWCDT 165


>gi|296445799|ref|ZP_06887751.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256627|gb|EFH03702.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 516

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 40/128 (31%), Gaps = 11/128 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              HIG+A   I  D   R  R    +  V +V  + +   K+   A +E          
Sbjct: 11  GAPHIGHAYERIATDAFARFKRLDGYD--VLFVTGMDEHGQKMQRTAEREGL------TP 62

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
             +  +   QF      L  LA     R T   H   ++ + + +   G  Y A     +
Sbjct: 63  QQLADRTAAQFQTMGETLNALADDVV-RTTQPRHAATVLEIWRRMEAAGDIYLAKYCGWY 121

Query: 155 DTSSIPNY 162
                  Y
Sbjct: 122 SVRDEAYY 129


>gi|293606889|ref|ZP_06689237.1| leucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292814741|gb|EFF73874.1| leucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 889

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + D++ R LR       +          D     
Sbjct: 42  KPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------DAFGMP 95

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLIQ---- 137
           A  E+ +I      +  T  N     K    +         R      PQ     Q    
Sbjct: 96  A--ENAAIKSKVPPAKWTYDNIAYMKKQMKAMGL--AIDWTREMCACDPQYYKWNQWLFL 151

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 152 KMLEKGVAYRKTQVVNWD 169


>gi|294635538|ref|ZP_06714018.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
 gi|291091107|gb|EFE23668.1| methionine--tRNA ligase [Edwardsiella tarda ATCC 23685]
          Length = 682

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K +N+++H G++ + G KMSKS G FI     L 
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPSNVFVH-GYVTVNGAKMSKSRGTFIQARTYLN 353

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                        +R      L    R + ID  ++   +      ++K     S + G 
Sbjct: 354 -------HLDPDCLRYYYAAKLSA--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 404

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L   L   +  Q     A E  + ++      A   I+ + ++   ++++  
Sbjct: 405 ITKRFAGQLSTTLADPALYQTFVDAAAEIAQAYEARESGKAIREIMALADLANRYVDEQA 464

Query: 406 SIAIEK 411
              + K
Sbjct: 465 PWVVAK 470


>gi|295399732|ref|ZP_06809713.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111749|ref|YP_003990065.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|294978135|gb|EFG53732.1| isoleucyl-tRNA synthetase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216850|gb|ADP75454.1| isoleucyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 923

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++E          A ++RL +
Sbjct: 568 AVAVTGKAPYKAVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLG-------ADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 621 ASVDYQADVRISDSILKQVAEVYRKIRNT 649


>gi|253743531|gb|EES99896.1| Methionyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
          Length = 593

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 14/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D L R  +    E    Y+   TD +     +   E   +    
Sbjct: 15  VNGKPHIGHVFTTLLADTLRRFRKLQGFEP---YLMTGTD-EHGQKVQQSAEKMGLQPQQ 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI----QNIILHGHAYEANN 150
               +       FV+       L P    R T  +P+   +     + +   G  Y+   
Sbjct: 71  WCDNMAKTFETYFVESFG----LCPDAFMRTT--MPEHAEMAIKLWKRLCDAGLIYKDKY 124

Query: 151 EIIFDTS 157
           E  +  +
Sbjct: 125 EGWYCVA 131


>gi|227890503|ref|ZP_04008308.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|227867441|gb|EEJ74862.1| leucyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
          Length = 805

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 14/146 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  ++++E        + A  +RL  M M      I ++ + L  
Sbjct: 570 LGSNHEKMSKSKGNVVNPDDIVE-------QYGADTLRLYEMFMGPLDASIPWSEEGLGG 622

Query: 330 AEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           A   +++ W         +   V +   +DL+     +  ++  ++ T++++ +    A 
Sbjct: 623 AHKFINRVWNLLIDENDNLRDRVTTINNHDLD-----KIYNETVKKVTEDYEAMHFNTAI 677

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQ 414
           + ++         +      +E LV+
Sbjct: 678 SQLMVFVNNAYKADSLPLEYVEGLVK 703


>gi|167855810|ref|ZP_02478563.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853089|gb|EDS24350.1| leucyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 861

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 54/156 (34%), Gaps = 48/156 (30%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           +H+G       KMSKS  N I   E++E        + A  +RL M+      P    ++
Sbjct: 613 VHSGM-----TKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLE 657

Query: 322 FTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLS---------------ALYND-- 358
           +    +  A+  L +          S +   +DP  LS                + +D  
Sbjct: 658 WQESGVEGAKRFLGRLWNLAYEYAQSPATVALDPTALSKEQKDLRRDVHKTITKVSDDIG 717

Query: 359 ----LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
                NT  AI A+ +L  + TK   +     A   
Sbjct: 718 RRQTFNT--AIAAIMELMNKLTKAPLVNDQDKAVMA 751


>gi|90961419|ref|YP_535335.1| leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|122993086|sp|Q1WUT3|SYL_LACS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|90820613|gb|ABD99252.1| Leucyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 805

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 14/146 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  ++++E        + A  +RL  M M      I ++ + L  
Sbjct: 570 LGSNHEKMSKSKGNVVNPDDIVE-------QYGADTLRLYEMFMGPLDASIPWSEEGLGG 622

Query: 330 AEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           A   +++ W         +   V +   +DL+     +  ++  ++ T++++ +    A 
Sbjct: 623 AHKFINRVWNLLIDENDNLRDRVTTINNHDLD-----KIYNETVKKVTEDYEAMHFNTAI 677

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQ 414
           + ++         +      +E LV+
Sbjct: 678 SQLMVFVNNAYKADSLPLEYVEGLVK 703


>gi|77461178|ref|YP_350685.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123758186|sp|Q3K6B0|SYL_PSEPF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77385181|gb|ABA76694.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 868

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 37/140 (26%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  QPGKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +  N A +  T +N          L  LA       T   P      Q  
Sbjct: 87  ENAA------MKNNVAPAKWTYENIAYMKSQLRSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|154246150|ref|YP_001417108.1| isoleucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
 gi|154160235|gb|ABS67451.1| isoleucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
          Length = 1012

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 23/163 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN  +  +++       +   A ++RL +
Sbjct: 655 SCGTRGRPPYDVVLTHGFVLDEDGRKMSKSLGNVTSPQDVI-------KQSGADILRLWV 707

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQ- 366
             + Y + +    + L        K   T      S     PA   A  +      A++ 
Sbjct: 708 CASDYADDLRIGPEILKTTADTYRKLRNTIRWLLGSLHHDRPAEHVAFAD---MP-ALER 763

Query: 367 -ALHKLA------RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
             LH+L       R + +  D   +  A    + IE+   + +
Sbjct: 764 YILHRLVELDGEIRAAYRAFDYKKVNAALTQFMNIELSAFYFD 806


>gi|325688602|gb|EGD30619.1| leucine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 858

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 634 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 686

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 687 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 742

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 743 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 802

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 803 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 832


>gi|322378728|ref|ZP_08053158.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
 gi|322380011|ref|ZP_08054276.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147563|gb|EFX42198.1| methionyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321148846|gb|EFX43316.1| methionyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 632

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 36/131 (27%)

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD----RIEKT 261
           S  G G+ G ++EC      +      IH  G D++  H     A    A      +   
Sbjct: 248 SALGYGK-GANLECF----KH-----TIHVVGKDILRFH-----AIYWVAFLMSLELPLF 292

Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-PI 320
             + +H G+  ++G KMSKS GN +   +L        +++    +R  +L    RE P+
Sbjct: 293 ERLCVH-GWWTIDGVKMSKSLGNVLDAQDL-------AKTYGTETLRYFLL----REVPL 340

Query: 321 ----DFTVQRL 327
               DF++Q L
Sbjct: 341 GQDGDFSLQAL 351


>gi|289450466|ref|YP_003475749.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
 gi|289185013|gb|ADC91438.1| methionine--tRNA ligase [Clostridiales genomosp. BVAB3 str.
           UPII9-5]
          Length = 672

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 48/119 (40%), Gaps = 11/119 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG++   +  D + R  R       V ++    +  +KI ERA     +      +  +
Sbjct: 19  HIGHSYSTVAADAMARYKRMAG--NDVFFLTGTDEHGEKIQERAEAAGKTPQA--FVDEL 74

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
            S      +KD  +L  ++     R T   H+  + Y++Q +   G  Y++  E  + T
Sbjct: 75  VSG-----IKDLWKLFNISYDKFIRTTDAEHMAGVKYIVQKLYDRGDIYKSEYEGWYCT 128


>gi|262037573|ref|ZP_06011029.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264]
 gi|261748395|gb|EEY35778.1| methionine--tRNA ligase [Leptotrichia goodfellowii F0264]
          Length = 633

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 40/113 (35%), Gaps = 11/113 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G A   I+ DV+ R  R    +  V+++  + +   KI E A +             
Sbjct: 18  PHVGTAYTTIICDVVSRYKRIKGYD--VSFMTGVDEHGQKIQEAAEKNGF------TPQQ 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
              K +  F     +L     T   R T   HI  +  +++ +   G  Y   
Sbjct: 70  WVDKMSLNFTTLWEKLNISN-TDYLRTTQERHIESVREIVKRVNEKGDIYRGE 121


>gi|256545394|ref|ZP_05472757.1| leucine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
 gi|256398955|gb|EEU12569.1| leucine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
          Length = 802

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 12/137 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L  + +KMSKS GN +  ++++       R + A  +R   M +  +
Sbjct: 561 KEPYQKRTSHGMILGEDHQKMSKSRGNVVNPDDIV-------RDYGADTLRCYEMFIGDF 613

Query: 317 REPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
           R    ++ + +      L +          G      +  L N   T+  +   ++  + 
Sbjct: 614 RSTAPWSDEGVKGCRKYLERVFNLYDLVEDGDSYTKEIEILIN--QTIKKVSEDYESLKY 671

Query: 375 STKNHDLLPIFNASAHI 391
           +T    L+ + N   +I
Sbjct: 672 NTAIASLMTLLNEMRNI 688


>gi|229168636|ref|ZP_04296358.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614792|gb|EEK71895.1| Isoleucyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 921

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 53/139 (38%), Gaps = 15/139 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAVLSALYNDLNTVSAIQALHK 370
               Y+  +  +   L +   +  K   T     G +D    S      NTV A+  L +
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNTFRFLLGNLDNFNPSE-----NTV-AVAELRE 674

Query: 371 LAR-ESTKNHDLLPIFNAS 388
           + R    K +DL+     +
Sbjct: 675 VDRYMLVKLNDLITKVKDA 693


>gi|15604286|ref|NP_220802.1| leucyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226188|sp|Q9ZDB1|SYL_RICPR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3860978|emb|CAA14878.1| LEUCYL-TRNA SYNTHETASE (leuS) [Rickettsia prowazekii]
 gi|292572035|gb|ADE29950.1| Leucyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 828

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N I +  + E        + A  IRL +L  +   + ++++   +      +
Sbjct: 594 EKMSKSKKNIIDLETIRE-------QYSADAIRLFVLSDSPPEKDLEWSASGIEGCSRFI 646

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLN 360
           +K      +   +   + S +  DLN
Sbjct: 647 NKLENMFEAIFSLKDDMKSEINKDLN 672


>gi|110633935|ref|YP_674143.1| methionyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110284919|gb|ABG62978.1| methionyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 517

 Score = 43.3 bits (101), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D L R  R     K V ++    +   K+++ AR+E            
Sbjct: 19  PHIGHAYELIATDALARFQR--CDGKDVMFLTGTDEHGIKMLQTARKE------GITAGE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N  +F +   +L   +     R T   H      + + +   G  Y       +  
Sbjct: 71  LADRNAPEFQR-MAKLLNASNDDFIRTTEERHRTASQAIWKAMADRGDIYLGGYSGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAYYGE 137



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 62/182 (34%), Gaps = 50/182 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  I     ++ H GFL   G KMSKS GN I    +
Sbjct: 257 DVHIIGKDIIRFHAIYWPAFLMSA-GIALPKRVFGH-GFLFNRGEKMSKSVGNVIDPFTM 314

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THYREP--IDFTVQRLTE-----AEILLS-- 335
           +E        +    +R   L          Y     ++ T   L       A+  LS  
Sbjct: 315 IE-------HYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLANDLGNLAQRSLSMI 367

Query: 336 ----------KWPQTSTSKGIIDPAVLSALYNDLNTVS----------AIQALHKLARES 375
                     +   ++  + I+D A  +AL     T            A+ A+  +  E+
Sbjct: 368 AKNCDGKVPARGELSAADRAILDQA-EAALA----TARGAMGRQAIHAALAAIFDVVAEA 422

Query: 376 TK 377
            +
Sbjct: 423 NR 424


>gi|253578857|ref|ZP_04856128.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849800|gb|EES77759.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 800

 Score = 43.3 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 26/166 (15%)

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            F HH   +      +  E  A   I    L  +G KMSKS GN +   +++E       
Sbjct: 545 RFWHH--FLYDLGVVNTPEPYAKRSIQGLILGPDGDKMSKSKGNVVDPLDIVE------- 595

Query: 301 SWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDP------A 350
            + A  +R   + M  Y     ++   +   +  L +        + + + D        
Sbjct: 596 EYGADTLRTYVLFMGDYGAATPWSENSVKGCKKFLDRVAGLTDILSEESVSDELEMKLHR 655

Query: 351 VLSALYND-----LNTVSA--IQALHKLARESTKNHDLLPIFNASA 389
            +  + +D      NT  A  +  ++++  E   + D L IF    
Sbjct: 656 TIKKVSSDIENLKFNTAIASLMTLINEITAEGHLSKDDLTIFIKLL 701


>gi|170719813|ref|YP_001747501.1| leucyl-tRNA synthetase [Pseudomonas putida W619]
 gi|229560000|sp|B1J150|SYL_PSEPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169757816|gb|ACA71132.1| leucyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 868

 Score = 43.3 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 62/152 (40%), Gaps = 21/152 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++E       ++ A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQSMIE-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +  Q   ++G+     L+AL ++   +   +A+H   ++++ +      FN A
Sbjct: 676 RFLRRVWRLAQGHVNQGLPGKLDLAALNDEQKVIR--RAIHTAIKQASTDVGQYHKFNTA 733

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            A ++ +    E   ++       L+QE L  
Sbjct: 734 IAQVMTVMNVLEKAPQSTEQD-RALLQEGLEA 764



 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 37/143 (25%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
               P     Y      Y     H+G+ R   + DV+ R  R     K V          
Sbjct: 26  VTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N A +  T +N          L  LA       T   P      
Sbjct: 84  MPAENAA------MKNNVAPAKWTYENIDYMKTQLKSLG-LAIDWAREVTTCKPDYYRWE 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     +   G  Y  N  + +D
Sbjct: 137 QWLFTRLFEKGIIYRKNGTVNWD 159


>gi|124382713|ref|YP_001024595.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|238561164|ref|ZP_04609455.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|238525147|gb|EEP88576.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
          Length = 1039

 Score = 43.3 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166


>gi|221068810|ref|ZP_03544915.1| isoleucyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220713833|gb|EED69201.1| isoleucyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 951

 Score = 43.3 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 48/288 (16%), Positives = 80/288 (27%), Gaps = 71/288 (24%)

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L        PR    I Q   +I+         +   E     S+             E 
Sbjct: 505 LHVDTGALHPRTMEIIDQAAAMIE---------QGGIEAWSRVST-------------ED 542

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
            +G    + Y K               E  ++S    G   WH     +   +     D 
Sbjct: 543 ILGAEEAKHYTKSTDIL----------EVWFDS----GSTFWH----VLRGTHPEHHHD- 583

Query: 234 HGGGLDLIFPHHENEIA-------QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           HG   DL    H+            +           +  H   ++ +G+KMSKS GN +
Sbjct: 584 HGPEADLYLEGHDQHRGWFHSSLLLASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTV 643

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
              ++            A +IRL +  T Y   +    + L        +   T      
Sbjct: 644 APQDVSSKMG-------AEIIRLWVASTDYSGDLGIDDKILARVVDAYRRIRNTLR---- 692

Query: 347 IDPAVLSALYNDLNTVS-AIQAL-------HKLARESTKNHDLLPIFN 386
                L A  +D +    A+            LAR +    ++L  + 
Sbjct: 693 ----FLLANTSDFDASKDAVAYGEMLEIDQFALARSAQLQQEILAHYK 736


>gi|33864825|ref|NP_896384.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
 gi|81575298|sp|Q7U9G9|SYI_SYNPX RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33632348|emb|CAE06804.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8102]
          Length = 974

 Score = 43.3 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 13/120 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 601 SVAVNGHAPYKRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRL 660

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLN-TVSAIQA 367
            +    Y   +      L +   +  K   TS    G +          D N    AI  
Sbjct: 661 WVSSVDYSADVPIGAGILRQLADVYRKVRNTSRYLLGNLH---------DFNPASDAIAV 711


>gi|71274586|ref|ZP_00650874.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Dixon]
 gi|71898125|ref|ZP_00680311.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|170730848|ref|YP_001776281.1| methionyl-tRNA synthetase [Xylella fastidiosa M12]
 gi|226710941|sp|B0U472|SYM_XYLFM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71164318|gb|EAO14032.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Dixon]
 gi|71732099|gb|EAO34155.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|167965641|gb|ACA12651.1| methionyl-tRNA synthetase [Xylella fastidiosa M12]
          Length = 702

 Score = 43.3 bits (101), Expect = 0.089,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 36/103 (34%), Gaps = 16/103 (15%)

Query: 219 CSA-MSSHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-N 268
           CS       +G+ FD H         HH       N  A    A      + A   +H N
Sbjct: 273 CSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPAVLHGTGRCAPTRLHVN 332

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           G+L ++G KMSKS G FI     L+             +R   
Sbjct: 333 GYLTVDGAKMSKSRGTFIMARTYLDA------GLEPDALRYYF 369


>gi|325845145|ref|ZP_08168454.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488810|gb|EGC91210.1| isoleucine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 911

 Score = 43.3 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 13/133 (9%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     +  H   L+ +GRKMSKS GN I   +L+       + + A ++RL +  
Sbjct: 570 AMTGRAPYKTVVSHGFVLDGQGRKMSKSIGNVIDPLKLI-------KIYGADIVRLWVAS 622

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AIQA 367
             Y+  +  +   + +      K   T      +    +P      Y DLN V    +  
Sbjct: 623 VDYQADVRISEDLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYEDLNEVDQFMMIR 682

Query: 368 LHKLARESTKNHD 380
           L++L +E    ++
Sbjct: 683 LNELTKELKSAYE 695


>gi|293366842|ref|ZP_06613518.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291319143|gb|EFE59513.1| isoleucine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 916

 Score = 43.3 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H  F++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFFMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKQTSDVYRKIRNT 651



 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|228992630|ref|ZP_04152556.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228766962|gb|EEM15599.1| Isoleucyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 962

 Score = 43.3 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 609 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 661

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 662 SSVDYQSDVRISDDILKQVAEVYRKIRNT 690


>gi|195052014|ref|XP_001993217.1| GH13195 [Drosophila grimshawi]
 gi|193900276|gb|EDV99142.1| GH13195 [Drosophila grimshawi]
          Length = 1185

 Score = 43.3 bits (101), Expect = 0.090,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 668 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDDTKWPKGMRVNGLLMLNSMKMSKSDGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T++E +E        + A  +RLAM
Sbjct: 726 LTLHEAIE-------KFSADGMRLAM 744


>gi|323353523|ref|ZP_08088056.1| leucine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121469|gb|EFX93232.1| leucine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 858

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 634 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 686

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 687 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 742

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 743 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVIWPTYDESKLVEAEVEIVV 802

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 803 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 832


>gi|315173068|gb|EFU17085.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1346]
          Length = 820

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEDKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|261885571|ref|ZP_06009610.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. venerealis str.
           Azul-94]
          Length = 531

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 22/120 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R  +  D L R+ RY   +    Y  N  D  ++I            +
Sbjct: 115 PT--GPLHIGHVRGAVYGDTLARVARYIGLDVFTEYYIN--DAGNQID----------LL 160

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
             +IS+        F +         P    R   +I  +  L          Y+ +  +
Sbjct: 161 GISISLFAR--EALFNE-----NVQYPDKYYR-GEYIEDIAKLALGKFGKDIFYDESRNL 212


>gi|229086460|ref|ZP_04218632.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696777|gb|EEL49590.1| Isoleucyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 921

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNT 649


>gi|229181329|ref|ZP_04308659.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228602222|gb|EEK59713.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 544

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|81429045|ref|YP_396045.1| leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
 gi|123769672|sp|Q38VP5|SYL_LACSS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78610687|emb|CAI55738.1| Leucyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
          Length = 807

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 12/106 (11%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E   +++     L     KMSKS GN +  +++++        + A  +RL  M M   
Sbjct: 556 KEPFQHLYNQGMILGDNHEKMSKSKGNVVNPDDVVDR-------FGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----ALYND 358
              I ++ + L  A   L +  +  T +   +   LS    A  ND
Sbjct: 609 DASISWSEKGLAGARKFLDRVWRLYTEEDTDENDQLSSKIVADNND 654


>gi|77409780|ref|ZP_00786432.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77171610|gb|EAO74827.1| valyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 655

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +  +N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFSNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|296535550|ref|ZP_06897732.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264136|gb|EFH10579.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 522

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 32/93 (34%), Gaps = 9/93 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +        +T  D+      + E  +     
Sbjct: 16  VNDKPHIGHAYTSLAADVLARWKRMMGHQVHF-----LTGTDEH---GQKVEKAAEARGM 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           A    T + +Q F     R+   +     R T 
Sbjct: 68  APQDFTDQVSQAFRDLAVRMN-YSNDDFIRTTE 99


>gi|293376235|ref|ZP_06622478.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292645127|gb|EFF63194.1| isoleucine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 911

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 13/133 (9%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     +  H   L+ +GRKMSKS GN I   +L+       + + A ++RL +  
Sbjct: 570 AMTGRAPYKTVVSHGFVLDGQGRKMSKSIGNVIDPLKLI-------KIYGADIVRLWVAS 622

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AIQA 367
             Y+  +  +   + +      K   T      +    +P      Y DLN V    +  
Sbjct: 623 VDYQADVRISEDLIKQVAESYRKMRNTFRFLLGNLFDFNPETDLVAYEDLNEVDQFMMIR 682

Query: 368 LHKLARESTKNHD 380
           L++L +E    ++
Sbjct: 683 LNELTKELKSAYE 695


>gi|228998676|ref|ZP_04158263.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|229006178|ref|ZP_04163864.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228755019|gb|EEM04378.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228761144|gb|EEM10103.1| Isoleucyl-tRNA synthetase [Bacillus mycoides Rock3-17]
          Length = 962

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 609 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 661

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 662 SSVDYQSDVRISDDILKQVAEVYRKIRNT 690


>gi|229193317|ref|ZP_04320267.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228590118|gb|EEK47987.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 544

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|118474762|ref|YP_892573.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
 gi|166232772|sp|A0RQU0|SYR_CAMFF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|118413988|gb|ABK82408.1| arginyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
          Length = 531

 Score = 43.3 bits (101), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 38/120 (31%), Gaps = 22/120 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R  +  D L R+ RY   +    Y  N  D  ++I            +
Sbjct: 115 PT--GPLHIGHVRGAVYGDTLARVARYIGLDVFTEYYIN--DAGNQID----------LL 160

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
             +IS+        F +         P    R   +I  +  L          Y+ +  +
Sbjct: 161 GISISLFAR--EALFNE-----NVQYPDKYYR-GEYIEDIAKLALGKFGKDIFYDESRNL 212


>gi|70726723|ref|YP_253637.1| isoleucyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|84029567|sp|Q4L5P4|SYI_STAHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68447447|dbj|BAE05031.1| Ile-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
          Length = 916

 Score = 43.3 bits (101), Expect = 0.092,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D++ R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDIIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQT 340
           L +   +  K   T
Sbjct: 638 LKQTSDVYRKIRNT 651


>gi|332358599|gb|EGJ36423.1| leucine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 837

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 613 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 665

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 666 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 721

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 722 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 781

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 782 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 811


>gi|320583657|gb|EFW97870.1| Mitochondrial leucyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 850

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 51/181 (28%), Gaps = 25/181 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           R+        P+  ++Y      Y     H+G+ R   + DVL R  R            
Sbjct: 29  RRKVA-----PTKGKIYSTAMFPYPSGILHMGHLRVYTIADVLARFYRMQGY-------- 75

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N+ +           E+ ++  N +    T  N  +       +           T   P
Sbjct: 76  NVINPMGWDAFGLPAENAAVDRNVSPEKWTKLNISKMKVQMEAM-LADFDWDREVTTCDP 134

Query: 131 QMIYLIQN----IILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
                 Q     +  HG+AY    EI              +  ++D +    R      K
Sbjct: 135 AYYKWTQKLFLLMYEHGYAYRKKAEINWDPVDQT----VLANEQVDSEGRSWRSGAVVEK 190

Query: 186 K 186
           +
Sbjct: 191 R 191


>gi|296273248|ref|YP_003655879.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296097422|gb|ADG93372.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 648

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D AHIG+A   I+ D+L R  R     K   ++    +   KI E A+    +    +
Sbjct: 16  VNDVAHIGHAYTTIIADMLARYSRLTG--KKTFFLTGTDEHGQKIEESAKLRGKTSK--E 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               ++ K  +    D      +      R T   H   + +  + +   G  Y+   E 
Sbjct: 72  YADEVSGKF-RALWDDFD----ITYDKFIRTTDEEHKTGVQFAFEKMFNKGDIYKGEYEG 126

Query: 153 IFDTS 157
            +  S
Sbjct: 127 YYCVS 131



 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 8/71 (11%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYRE 318
                   +G+   +G KMSKS GN +   E+ +       ++     R  ML    + +
Sbjct: 283 PLPKHIAAHGWWTRDGDKMSKSKGNVVNPKEVAD-------AYGLDAFRYFMLREVPFGQ 335

Query: 319 PIDFTVQRLTE 329
             DF+ + L +
Sbjct: 336 DGDFSQKALMD 346


>gi|239826541|ref|YP_002949165.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511504|sp|C5D8P2|SYI_GEOSW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|239806834|gb|ACS23899.1| isoleucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 923

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++E          A ++RL +
Sbjct: 568 AVAVTGKAPYKAVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLG-------ADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 621 ASVDYQADVRISDSILKQVAEVYRKIRNT 649


>gi|238753408|ref|ZP_04614771.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
 gi|238708361|gb|EEQ00716.1| Methionyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
          Length = 675

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    +   + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGSHFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKASTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A    + ++      A   I+ + +V   ++++  
Sbjct: 400 INKRFDGKLADKLADPALYKTFTDAATSIAEAYNSRESGRAIREIMALADVANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|167771623|ref|ZP_02443676.1| hypothetical protein ANACOL_02995 [Anaerotruncus colihominis DSM
           17241]
 gi|167666263|gb|EDS10393.1| hypothetical protein ANACOL_02995 [Anaerotruncus colihominis DSM
           17241]
          Length = 827

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 53/137 (38%), Gaps = 18/137 (13%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E  A    H   L   G KMSKS GN +  ++++       R + A  +RL  M +  + 
Sbjct: 587 EPYAKRTSHGMILGENGEKMSKSRGNVVNPDDIV-------RDYGADTLRLYEMFIGDFE 639

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
           +   ++   +   +  L +             A  SAL           ALHK  ++ T+
Sbjct: 640 KSAPWSQSSIKGCKRFLERVFGLLDCL-EPGEAYSSALE---------SALHKTIKKVTE 689

Query: 378 NHDLLPIFNASAHILGI 394
           + + L    A A ++ +
Sbjct: 690 DIESLKFNTAIAAMMSL 706


>gi|206975955|ref|ZP_03236865.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217961947|ref|YP_002340517.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|222097904|ref|YP_002531961.1| valyl-tRNA synthetase [Bacillus cereus Q1]
 gi|206745707|gb|EDZ57104.1| valyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067118|gb|ACJ81368.1| valyl-tRNA synthetase [Bacillus cereus AH187]
 gi|221241962|gb|ACM14672.1| valyl-tRNA synthetase [Bacillus cereus Q1]
          Length = 881

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|152978421|ref|YP_001344050.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|171704228|sp|A6VMB8|SYL_ACTSZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150840144|gb|ABR74115.1| leucyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 860

 Score = 43.3 bits (101), Expect = 0.093,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLS----AL-----------YND----- 358
             +  A+  L +          + +K  ++P  LS    AL            +D     
Sbjct: 661 SGVEGAKRFLGRLWNLVFEYNKNPAKTALNPTALSGVQKALRRGVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + T+         A   
Sbjct: 721 TFNT--AIAAIMELMNKLTRASLAGEQDRAIMG 751


>gi|332364823|gb|EGJ42592.1| leucine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 858

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 634 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 686

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 687 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 742

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLNKN----------------ISIAIEKLV 413
              L        + +    A  L  E+ +     +                +   +E +V
Sbjct: 743 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVTQTDDSISYVAWPTYDESKLVEAEVEIVV 802

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 803 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 832


>gi|330826981|ref|YP_004390284.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329312353|gb|AEB86768.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 901

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D +  + Y C    Y     H+G+ R   + D+L R LR       +          D  
Sbjct: 29  DAARPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGYNVLMPMGW------DAF 82

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ ++      +  T +N     +    +  LA           P      Q  
Sbjct: 83  GLPA--ENAALKNGVPPARWTYENIAYMKQQMQAMG-LAIDWSREVATCDPDYYKWNQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY     + +D
Sbjct: 140 FLKMLERGIAYRKTQVVNWD 159


>gi|317506073|ref|ZP_07963901.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974]
 gi|316255645|gb|EFV14887.1| tRNA synthetase class I [Segniliparus rugosus ATCC BAA-974]
          Length = 514

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H G+A   I  D L R  R     K V +   + +   K+ + A +E        +   
Sbjct: 19  PHFGHAYEFISADALARFARLDG--KEVFFSMGMDEYGLKVQQSAEKE------GVSPQA 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +  ++F +    L         R T   H      L + +  +G  YE      +  
Sbjct: 71  FVDRVAERFRELHAALGSSY-DRFIRTTEPAHAKASQELWRRMSANGDVYEGRYAGWYSV 129

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 130 RDEAFYGE 137


>gi|312080908|ref|XP_003142801.1| hypothetical protein LOAG_07219 [Loa loa]
 gi|307762036|gb|EFO21270.1| hypothetical protein LOAG_07219 [Loa loa]
          Length = 617

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 46/124 (37%), Gaps = 16/124 (12%)

Query: 221 AMSSHYL--GKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLE 274
           AM           D+   G DL+  H      N +A     D+ E        NG L L 
Sbjct: 122 AMCRKEFRYWYPVDMRASGKDLLQNHLTYYLFNHVAIWK--DQPELWPRSIRANGHLLLN 179

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEIL 333
             KMSK  GNF+T++E +         + A  +R+++     Y E  +F       A + 
Sbjct: 180 NEKMSKQTGNFLTLSETVAM-------FSADGMRISLADAGDYVEDANFVYDMADAAVLR 232

Query: 334 LSKW 337
           L   
Sbjct: 233 LYNL 236


>gi|257094115|ref|YP_003167756.1| isoleucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257046639|gb|ACV35827.1| isoleucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 942

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  D       +  H   ++ +G KMSKS GN I   ++ +T         A ++RL 
Sbjct: 595 IGCAMDGRAPYKALLTHGFVVDGKGLKMSKSKGNVIAPQKIADTLG-------ADILRLW 647

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y   +  + + L        +   T
Sbjct: 648 VAATDYSGELSISDEILKRVVEAYRRIRNT 677



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 17/123 (13%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERARQEHPSIPIN 93
              HIG+A   I+ D++ R       +           +  I+ +I +R  +  P+  + 
Sbjct: 62  GDIHIGHAVNKILKDIIVRSKTLAGFDAPYVPGWDCHGLP-IEHQIEKRHGKHVPADRVR 120

Query: 94  DAISIITSKNTQQFVKDTTRLACL----AP----THQPRATNHIPQMIYLIQNIILHGHA 145
           +      ++  ++  KD  RL  L     P      +  A       I  +  I+  G+ 
Sbjct: 121 ELCRAFAAEQIERQKKDFIRLGVLGDWGRPYLTMDFRTEANE-----IRTLGRILDKGYL 175

Query: 146 YEA 148
           Y+ 
Sbjct: 176 YQG 178


>gi|195064774|ref|XP_001996635.1| GH19679 [Drosophila grimshawi]
 gi|193892767|gb|EDV91633.1| GH19679 [Drosophila grimshawi]
          Length = 578

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 50/152 (32%), Gaps = 11/152 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y    V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPTTTVRLCTGTDEHGTKIQQAAAGHKVPVD--Q 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+++    F   +     +A     R T   H   + +    +   GH Y A    
Sbjct: 87  YCDEISARYRDVFKAAS-----IAHDDFIRTTEQRHKQAVAHFWHRLKSRGHIYSAAYSG 141

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
            +   S   + + S+ ++DE   GTR   +  
Sbjct: 142 WYCV-SDETFLTDSQLRLDE-SSGTRYSLESG 171



 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 29/72 (40%), Gaps = 13/72 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +     +++H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 296 AAGLSPPQQLYVHSHW-TVDGQKMSKSKHNVV-------DPVLAAKQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT 323
              H     +F+
Sbjct: 348 GVAH--SDGNFS 357


>gi|313889902|ref|ZP_07823543.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313121750|gb|EFR44848.1| valine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 883

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    +     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDTEAEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+ IH    + EGRKMSKS GN I   +++E        + A  +R  +
Sbjct: 495 SLEFTNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVVE-------KYGADALRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  A   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDAAWNFINKI 574


>gi|319764765|ref|YP_004128702.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317119326|gb|ADV01815.1| leucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 901

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D +  + Y C    Y     H+G+ R   + D+L R LR       +          D  
Sbjct: 29  DAARPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGYNVLMPMGW------DAF 82

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ ++      +  T +N     +    +  LA           P      Q  
Sbjct: 83  GLPA--ENAALKNGVPPARWTYENIAYMKQQMQAMG-LAIDWSREVATCDPDYYKWNQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY     + +D
Sbjct: 140 FLKMLERGIAYRKTQVVNWD 159


>gi|293567619|ref|ZP_06678963.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
 gi|291589720|gb|EFF21524.1| valyl-tRNA synthetase [Enterococcus faecium E1071]
          Length = 881

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  +   ++K    S 
Sbjct: 541 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNASR 583


>gi|259046843|ref|ZP_05737244.1| leucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036466|gb|EEW37721.1| leucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 818

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 31/147 (21%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTH 315
             E    ++     L     KMSKS GN +  ++++       R + A  +R   M M  
Sbjct: 570 NKEPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDVV-------REYGADTLRVYEMFMGP 622

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---D-------------- 358
               I ++ + L  +   L ++ +            ++ L +   D              
Sbjct: 623 LDASIAWSEKGLEGSRKFLDRFWRLMIDDNGKMRDRITKLNDGKLDKVYHQTVKKVTEDF 682

Query: 359 ----LNTVSAIQALHKLARESTKNHDL 381
                NT  AI  +     E+ K   L
Sbjct: 683 EELHFNT--AISQMMIFVNEAYKADAL 707


>gi|227550359|ref|ZP_03980408.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257897234|ref|ZP_05676887.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|293378006|ref|ZP_06624184.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
 gi|227180498|gb|EEI61470.1| valine--tRNA ligase [Enterococcus faecium TX1330]
 gi|257833799|gb|EEV60220.1| valyl-tRNA synthetase [Enterococcus faecium Com12]
 gi|292643371|gb|EFF61503.1| valine--tRNA ligase [Enterococcus faecium PC4.1]
          Length = 881

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  +   ++K    S 
Sbjct: 541 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNASR 583


>gi|227498594|ref|ZP_03928738.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904050|gb|EEH89968.1| isoleucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 934

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 9/122 (7%)

Query: 221 AMSSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
           A+ +H+ G  +  D++  G D      ++ +  S           +  H   L+ EGRKM
Sbjct: 552 AVLNHFPGLTWPADLYLEGSDQHRGWFQSSLLTSVATTGKAPYRAVLTHGYTLDGEGRKM 611

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
           SKS GN +   +++       + + A ++RL +  T Y+  +  + + +     +  K  
Sbjct: 612 SKSLGNTVAPQDII-------KDYGADIVRLWVSSTDYKGDVRVSKEIIKHVSEVYRKIR 664

Query: 339 QT 340
            T
Sbjct: 665 NT 666


>gi|217976728|ref|YP_002360875.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217502104|gb|ACK49513.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 519

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 40/136 (29%), Gaps = 20/136 (14%)

Query: 33  PTVY---------DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           PT Y            HIG+A   I  D + R  R    E        +T +D+      
Sbjct: 4   PTFYITTAIPYANGAPHIGHAYERIATDAIARFKRLDGYETLF-----VTGMDEH---GQ 55

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIIL 141
           + +  +   N +   +  +   QF      L   +     R T   H      + + +  
Sbjct: 56  KMQQTAARENLSPLQLADRTAAQFYA-MGELLNASADDIVRTTEARHHAASQEIWKRMQA 114

Query: 142 HGHAYEANNEIIFDTS 157
            G  Y +     +   
Sbjct: 115 SGDIYLSKYPGWYSVR 130


>gi|113869000|ref|YP_727489.1| isoleucyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|122946626|sp|Q0K7A0|SYI_RALEH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113527776|emb|CAJ94121.1| Isoleucyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 964

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN ++  ++            A +IRL +  T 
Sbjct: 616 YGKPPYKALLTHGFTVDGEGRKMSKSIGNTVSPQDI-------SNKMGAEIIRLWVASTD 668

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 669 YSGELSISDEILKRVVEGYRRIRNT 693


>gi|52142901|ref|YP_083929.1| lysine--tRNA ligase, class I (lysyl-tRNA synthetase, class I)
           [Bacillus cereus E33L]
 gi|51976370|gb|AAU17920.1| lysine--tRNA ligase, class I (lysyl-tRNA synthetase, class I)
           [Bacillus cereus E33L]
          Length = 517

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 75/461 (16%), Positives = 135/461 (29%), Gaps = 82/461 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACLAPTHQP-- 123
             R +  +I+    +     +  IP              ++F +                
Sbjct: 69  RFRKVPKNINPSFAKYIGMPYCDIPDPYGCHNFYAEHFEKEFEESLQVFGIEVEFIYQHA 128

Query: 124 --RATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRR--K 169
             R+  +   ++           I      G   E         T      G  +     
Sbjct: 129 EYRSGRYNKNILEALYKRKEIYDILMSFKTGECSEEEREGFYPVTLYCEKCGKDATTITH 188

Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
            DE     R   +   +     +    +  M+  W+  W      W IE           
Sbjct: 189 FDEVLKTVRYECECGNQTELSVL---NTNKMKLNWKIDWPMR---WMIEDVVFEP----- 237

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFIT 287
                 GG D         +++        + A  +I   F+ ++G   KMS S+GN IT
Sbjct: 238 ------GGRDHSSETGSYNVSKEIARKIFNREAPHYIAYDFIGIKGHHEKMSSSSGNSIT 291

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTSK 344
            +ELL       + +   VI        YR    F     + +        +   +  +K
Sbjct: 292 PSELL-------KVYLPEVILFMF--AKYRPDAAFHIGLDEDVIRNYTEYERLKDSYENK 342

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
            + +  +  A+              KL+R  +   +  P FN  A  L +      + + 
Sbjct: 343 MLKNEDLFDAI--------------KLSRAESGFKE-YPKFNQVAGTLPLLHFDSFILQG 387

Query: 405 ISIAIE---KLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           I   I+    L + R I  + + +     IRK    K   +
Sbjct: 388 ILEKIDRSYALDEMRSISNRAEYW-----IRKFRSEKLIEV 423


>gi|69246247|ref|ZP_00603860.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257879526|ref|ZP_05659179.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257883460|ref|ZP_05663113.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257890246|ref|ZP_05669899.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257894823|ref|ZP_05674476.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|258616812|ref|ZP_05714582.1| valyl-tRNA synthetase [Enterococcus faecium DO]
 gi|260559758|ref|ZP_05831938.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|293559745|ref|ZP_06676266.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|294622457|ref|ZP_06701479.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|314938905|ref|ZP_07846172.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|314943091|ref|ZP_07849892.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|314948112|ref|ZP_07851513.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
 gi|314951622|ref|ZP_07854667.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|314993873|ref|ZP_07859207.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|314996714|ref|ZP_07861737.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|68195348|gb|EAN09797.1| Valyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
 gi|257813754|gb|EEV42512.1| valyl-tRNA synthetase [Enterococcus faecium 1,230,933]
 gi|257819118|gb|EEV46446.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,502]
 gi|257826606|gb|EEV53232.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,410]
 gi|257831202|gb|EEV57809.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,408]
 gi|260074426|gb|EEW62748.1| valyl-tRNA synthetase [Enterococcus faecium C68]
 gi|291598004|gb|EFF29114.1| valyl-tRNA synthetase [Enterococcus faecium U0317]
 gi|291606293|gb|EFF35706.1| valyl-tRNA synthetase [Enterococcus faecium E1162]
 gi|313589152|gb|EFR67997.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a01]
 gi|313591683|gb|EFR70528.1| valyl-tRNA synthetase [Enterococcus faecium TX0133B]
 gi|313596218|gb|EFR75063.1| valyl-tRNA synthetase [Enterococcus faecium TX0133A]
 gi|313598193|gb|EFR77038.1| valyl-tRNA synthetase [Enterococcus faecium TX0133C]
 gi|313641779|gb|EFS06359.1| valyl-tRNA synthetase [Enterococcus faecium TX0133a04]
 gi|313645448|gb|EFS10028.1| valyl-tRNA synthetase [Enterococcus faecium TX0082]
          Length = 881

 Score = 43.3 bits (101), Expect = 0.094,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  +   ++K    S 
Sbjct: 541 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNASR 583


>gi|312868060|ref|ZP_07728264.1| leucine--tRNA ligase [Streptococcus parasanguinis F0405]
 gi|311096464|gb|EFQ54704.1| leucine--tRNA ligase [Streptococcus parasanguinis F0405]
          Length = 833

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 70/213 (32%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     + ++    NT  AI         + K
Sbjct: 662 DRVYRLITSKEIVAENNGALDKVYNETVKSVTEQIESM--KFNT--AIAQFMVFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCK----------------EHLNKNISIAIEKLV 413
              L        + +    A  L  E+ +                   +K +   IE +V
Sbjct: 718 EDKLYVDYAKGFIQLIAPFAPHLAEELWQTVAATGESISYVAWPTWDESKLVEDEIEIVV 777

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 778 QIKGKVRA-KLMVAKDLSREELQE--VALADEK 807


>gi|257885020|ref|ZP_05664673.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
 gi|257820872|gb|EEV48006.1| valyl-tRNA synthetase [Enterococcus faecium 1,231,501]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  +   ++K    S 
Sbjct: 541 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNASR 583


>gi|228929504|ref|ZP_04092524.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228830184|gb|EEM75801.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 867

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 64/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +G KMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGHKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|209885248|ref|YP_002289105.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209873444|gb|ACI93240.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 523

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R    +        +T  D+  ++       +     
Sbjct: 21  PNGAPHIGHAYEAIATDALARFQRLDGMDVFF-----LTGTDEHGLK---MIQTAQKEGM 72

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
             + + ++N  +F KD  R   ++     R +   H      + + +  +G  Y ++   
Sbjct: 73  TPAELATRNAARF-KDMDRRLNISFDRFIRTSEVAHHDSTQEIWRRMAANGDIYLSSYAG 131

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 132 WYSVRDEAYY 141



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  I     ++ H GFL   G KMSKS GN +   EL
Sbjct: 263 DVHVIGKDIIRFHAVYWPAFLMSA-GIAVPKRVYAH-GFLFNRGEKMSKSVGNVVDPFEL 320

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                     +    +R  +L
Sbjct: 321 -------ANQYGVDQLRYFLL 334


>gi|168008836|ref|XP_001757112.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162691610|gb|EDQ77971.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1002

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 2/123 (1%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
              +   L    D++  G D      ++ +  S   +       +  H   L+  G KMS
Sbjct: 568 VVAARKELRSPADLYLEGSDQHRGWFQSSLLTSVATEGRAPYKTVLTHGFVLDERGHKMS 627

Query: 280 KSNGNFITINELLETKKF--GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +    ++E  K       + A V+RL +    Y   +    Q + +   +  K 
Sbjct: 628 KSLGNVVDPRSVIEGGKNQKAEPGYGADVLRLWVSSVDYTGDVMIGPQIVRQMSEIYRKL 687

Query: 338 PQT 340
             T
Sbjct: 688 RGT 690


>gi|149202271|ref|ZP_01879244.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144369|gb|EDM32400.1| valyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 1039

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 70/196 (35%), Gaps = 50/196 (25%)

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           W  G  GW  E +A    Y      I   G D+IF      +         +  A++++H
Sbjct: 620 WPIGTLGW-PENTAELQKYFPTSVLI--TGFDIIFFWVARMMMMQYAVVGQKPFAHVYVH 676

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------------- 313
               + +G+KMSKS GN +   +L+E        +    +R  +                
Sbjct: 677 ALVRDEKGKKMSKSLGNVLDPLDLIED-------YGTDAVRFTLTSMAAMGRDLKLSKER 729

Query: 314 -THYREPIDFTVQRLTEAE------------------ILLSKW--PQTSTSKGIIDPAVL 352
              YR   +FT +    A                     ++KW   +T+ ++  +D A+ 
Sbjct: 730 IAGYR---NFTTKLWNAARFAEMNGAVGSAGTVPAPTATVNKWIIGETAKTRATVDEALE 786

Query: 353 SALYNDLNTVSAIQAL 368
           +  +ND    +A+ A 
Sbjct: 787 NFRFND--AANALYAF 800


>gi|148827028|ref|YP_001291781.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|187647724|sp|A5UF42|SYM_HAEIG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148718270|gb|ABQ99397.1| methionyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 682

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 66/192 (34%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLDDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I     S L + L   S        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFESKLADKLEDESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|14520895|ref|NP_126370.1| arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|13878801|sp|Q9V0V2|SYR_PYRAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|5458112|emb|CAB49601.1| argS arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 625

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 58/161 (36%), Gaps = 28/161 (17%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDA-- 95
             H+G+AR  I+ D + R+LR+   E     V+N   IDD  I+ A+     + + +   
Sbjct: 133 PLHMGHARNAILGDSMARILRFLGYEVE---VQNY--IDDLGIQFAQVYWGYLKLREKFE 187

Query: 96  --ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
             +  +  K  ++   D   L  L      R     P++   I+                
Sbjct: 188 KIMKELKEKGIKEDPID-HVLGLLYVEVN-RVLEENPEIEAEIR---------------- 229

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
            D       G  + R++ E  +  ++   Y      D ++W
Sbjct: 230 -DIMKKLESGELNGRELAESVVRAQMVTTYRLGIKYDLLVW 269


>gi|226943309|ref|YP_002798382.1| isoleucyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511493|sp|C1DPH5|SYI_AZOVD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226718236|gb|ACO77407.1| isoleucyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 943

 Score = 42.9 bits (100), Expect = 0.095,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 51/139 (36%), Gaps = 19/139 (13%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D       +  H   ++  GRKMSKS GN I   E+ ++         A ++RL +  
Sbjct: 585 AIDGHAPYRGLLTHGFTVDENGRKMSKSLGNVIAPQEITDSMG-------ADILRLWVSA 637

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQALH 369
           T Y   +  + Q L  +     +   T+     +    DPA       DL     + AL 
Sbjct: 638 TDYSGEMAVSKQILQRSADAYRRIRNTARFLLANLSGFDPAK------DLLAAEDMLALD 691

Query: 370 KLA--RESTKNHDLLPIFN 386
           + A  R      ++   F+
Sbjct: 692 RWAVDRALLLQREVEEAFD 710


>gi|257888392|ref|ZP_05668045.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|293570381|ref|ZP_06681438.1| valyl-tRNA synthetase [Enterococcus faecium E980]
 gi|257824446|gb|EEV51378.1| valyl-tRNA synthetase [Enterococcus faecium 1,141,733]
 gi|291609559|gb|EFF38824.1| valyl-tRNA synthetase [Enterococcus faecium E980]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  +   ++K    S 
Sbjct: 541 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNASR 583


>gi|229141196|ref|ZP_04269735.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
 gi|228642237|gb|EEK98529.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
          Length = 867

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|193636717|ref|XP_001949755.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like
           [Acyrthosiphon pisum]
          Length = 943

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 38/88 (43%), Gaps = 2/88 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +    ++++H   ++  GRKMSKS GN I   +++    +        V+R  +
Sbjct: 597 SIALRNVSPFKSLFVHGFVVDKNGRKMSKSIGNVIDPQDIVNGN-YDKSIDGIDVLRWWV 655

Query: 312 LMT-HYREPIDFTVQRLTEAEILLSKWP 338
                ++  I  T + L +++  + K  
Sbjct: 656 AKHGSHQTNIPVTKETLNDSKQSVDKLR 683


>gi|89055958|ref|YP_511409.1| isoleucyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|88865507|gb|ABD56384.1| Isoleucyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 992

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           QS          N+  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 646 QSVGTQGRAPYRNVVTHGFTLDEKGLKMSKSIGNTIVPEEVI-------KQYGADILRLW 698

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +  T Y        + L        +   T
Sbjct: 699 VAQTDYTADQRIGPEILKGTADSYRRLRNT 728


>gi|115449027|ref|NP_001048293.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|46805524|dbj|BAD16975.1| putative isoleucyl-tRNA synthetase [Oryza sativa Japonica Group]
 gi|113537824|dbj|BAF10207.1| Os02g0778200 [Oryza sativa Japonica Group]
 gi|222623772|gb|EEE57904.1| hypothetical protein OsJ_08590 [Oryza sativa Japonica Group]
          Length = 1058

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 2/111 (1%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S         +++  H   L+ +G KMSKS GN +   ++
Sbjct: 646 DIYLEGSDQHRGWFQSSLLTSIATTGKAPYSSVITHGFVLDEKGFKMSKSLGNVVDPEKV 705

Query: 292 LETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +   K   +   + A V+RL +    Y   +    Q L +   +  K   T
Sbjct: 706 IVGGKNSKQEPGYGADVLRLWVSSVDYTGDVLVGPQILRQMSDMYRKLRGT 756


>gi|152976256|ref|YP_001375773.1| isoleucyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|189082319|sp|A7GRM0|SYI_BACCN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|152025008|gb|ABS22778.1| isoleucyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 921

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   ++++            ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSIGNIVVPKKIMDQLG-------GDILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 621 SSVDYQSDVRISDDILKQVAEVYRKIRNT 649



 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 60/185 (32%), Gaps = 31/185 (16%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA------ 83
           GP  Y     H+G+A   ++ D + R         C  YV    D     IE+A      
Sbjct: 55  GP-PYANGDIHMGHALNKVLKDFIVRYKSMTGY--CAPYVPGW-DTHGLPIEQALTNKGV 110

Query: 84  -RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNI 139
            R+E P        +    +   +  +   RL   A    P  T    +  Q I +   +
Sbjct: 111 KRKEMPVAEFRKLCAEYAYEQVNRQREQFKRLGVRADWDHPYITLEPAYEAQQIKVFGEM 170

Query: 140 ILHGHAYEANNEIIFDTSS----------IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
              G+ Y+    + +  +S            +  S S     E K G  V E   K    
Sbjct: 171 AKKGYIYKGQKPVYWSPTSESALAEAEIEYKDKKSASIYVAFEVKDGKDVLEGDEK---- 226

Query: 190 DFILW 194
            FI+W
Sbjct: 227 -FIIW 230


>gi|47566648|ref|ZP_00237470.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|229158076|ref|ZP_04286146.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
 gi|47556678|gb|EAL15010.1| valyl-tRNA synthetase [Bacillus cereus G9241]
 gi|228625395|gb|EEK82152.1| Valyl-tRNA synthetase [Bacillus cereus ATCC 4342]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.096,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|330953013|gb|EGH53273.1| leucyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 868

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIDYMKTQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|313109428|ref|ZP_07795388.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
 gi|310881890|gb|EFQ40484.1| leucyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
          Length = 887

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 40/139 (28%), Gaps = 15/139 (10%)

Query: 23  PSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P   + Y      Y     H+G+ R   + DV+ R  R           RN+        
Sbjct: 30  PDKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYHRMQG--------RNVLQPMGWDA 81

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ--- 137
                E+ ++  N A +  T  N          L  LA       T   P      Q   
Sbjct: 82  FGMPAENAAMKNNVAPAAWTYDNIAYMKSQLDSLG-LAIDWSREVTTCKPDYYRWEQWLF 140

Query: 138 -NIILHGHAYEANNEIIFD 155
             +   G  Y  N  + +D
Sbjct: 141 TRLFEKGVIYRKNGTVNWD 159



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++        + A   RL M+      P    ++++   +  A 
Sbjct: 645 EKMSKSKNNGVDPQSMID-------QYGADTCRLFMMFA---SPPDMSLEWSDAGVEGAN 694

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +      S G+     ++AL +    V   +A+H   R+++++      FN A
Sbjct: 695 RFLRRVWRLAHAHVSAGLPGALDVAALNDAQKQVR--RAIHLAIRQASQDVGQHHKFNTA 752

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQE 415
            A ++ +    E    N       L+QE
Sbjct: 753 IAAVMTLMNVLEKA-PNQDAQDRALIQE 779


>gi|257899235|ref|ZP_05678888.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
 gi|257837147|gb|EEV62221.1| valyl-tRNA synthetase [Enterococcus faecium Com15]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  +   ++K    S 
Sbjct: 541 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNASR 583


>gi|229198587|ref|ZP_04325289.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
 gi|228584869|gb|EEK42985.1| Valyl-tRNA synthetase [Bacillus cereus m1293]
          Length = 867

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|254282433|ref|ZP_04957401.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B]
 gi|219678636|gb|EED34985.1| methionyl-tRNA synthetase [gamma proteobacterium NOR51-B]
          Length = 523

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 59/166 (35%), Gaps = 14/166 (8%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A   CA     +A I++H GFL ++G KMSKS G FI     L+
Sbjct: 265 HFIGKDIINFHGLFWPAMLHCAGLRMPSA-IFVH-GFLTVDGTKMSKSRGTFIMARTYLD 322

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYRE-PIDFTVQRLTEAEILLSKWPQ-TSTSKGIID 348
                        +R      L +   +  ++ +         L+ K     S   G + 
Sbjct: 323 -------HLDPEYLRYYFAAKLSSGVDDIDLNLSDFVQRVNSDLVGKVVNIASRCAGFLR 375

Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
               + L +  +    +           ++++ L    A   I+ +
Sbjct: 376 KRFDNQLADTCDEPELVADFINQGSSIAEHYENLEFNRAMRDIIAL 421


>gi|254432512|ref|ZP_05046215.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
 gi|197626965|gb|EDY39524.1| isoleucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
          Length = 990

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 6/109 (5%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    L+E  +   +   + A V+RL
Sbjct: 602 SVAVNGEAPYRRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGRNEKQEPAYGADVLRL 661

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSA 354
            +    Y   +      + +   +  K   T+     +    DP   +A
Sbjct: 662 WVSSVDYSADVPLGPGIVKQLADVYRKVRNTARYLLGNLHDFDPRPAAA 710


>gi|150395637|ref|YP_001326104.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|150027152|gb|ABR59269.1| isoleucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 969

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +G KMSKS GN +T  E+
Sbjct: 598 DVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVITHGFTMDEKGEKMSKSKGNTVTPQEV 657

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 658 MKDAG-------ADILRLWVMTTDY-----WEDQRLGKTIIQTNIDAYRKLRNTVRWMLG 705

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +   LS +                +  L +L RE     D   I  +      
Sbjct: 706 TLAHDKGEVVALSEM------PELERLMLHRLAELDRLVREGYDAFDFKRIARSLIDFSN 759

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 760 VELSAFYFD 768


>gi|42783595|ref|NP_980842.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81409029|sp|Q72ZW8|SYV_BACC1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|42739524|gb|AAS43450.1| valyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.097,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|294102407|ref|YP_003554265.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
 gi|293617387|gb|ADE57541.1| arginyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
          Length = 558

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 53/327 (16%), Positives = 107/327 (32%), Gaps = 55/327 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   V D++ R+L +   +    Y  N   +  +I+ R+ Q      +
Sbjct: 133 PT--GPLHVGHGRGAAVGDIIARILDFTGWQVEKEYYINDAGLQMEILGRSTQSRYFKLL 190

Query: 93  NDAISIIT--SKNTQQFVKDTTRLAC----LAPTHQPRA-------TNHIPQMIYLIQNI 139
           N              +++ D  R             P         T    +++  I+  
Sbjct: 191 NCPERAPFPEDAYKGEYIYDLAREIIDQEGDRFLSLPLEESLGFFQTYAAGRILEGIKKD 250

Query: 140 ILH-GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           +   G AY    ++ F   S+ +  +   + ++         E+          LW R+T
Sbjct: 251 LADFGVAY----DVWFSEKSLYD-RNLVPQAMEMLNKHGYAYEEEG-------ALWFRAT 298

Query: 199 PMEPGWESPW--GRGRP-------GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
                 +       G P        +H+E     S    +V D+ G       P  +   
Sbjct: 299 AFGDEKDRVLIRNNGVPTYFASDITYHMEKF---SRGFQRVIDVWGADHHGYVPRMK--- 352

Query: 250 AQSCCADRIEKTANIWIHNGFLNL----EGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           A      +   +  + +   F+NL    E   MS  +G F+T+ ++++            
Sbjct: 353 AGVEALGKERGSLEV-VLIQFVNLLRGGEQVAMSTRSGQFVTLRDVMDEVGV-------D 404

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEI 332
             R   +M      +DF ++   ++  
Sbjct: 405 ATRYFFVMRRSDSHLDFDLELAKQSSN 431


>gi|260772448|ref|ZP_05881364.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
 gi|260611587|gb|EEX36790.1| methionyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
          Length = 658

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L 
Sbjct: 266 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNVFVH-GYVTVNGAKMSKSKGTFVKASTYL- 322

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                 +      +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 323 ------KHLDPECLRYY-----YAAKLN---NRIDDLDLNLEDFTQRVNADVVNKIVNLA 368

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I     + L                A    + ++      A   I  + +   +
Sbjct: 369 SRNAGFISKRFDNQLSATFAEPELYAEFAAAAERIAELYETREFGRAIREITALADKANQ 428

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 429 YVDEKAPWVIAK 440


>gi|261209049|ref|ZP_05923453.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289566557|ref|ZP_06446979.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|293557231|ref|ZP_06675779.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
 gi|294615719|ref|ZP_06695572.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|294617315|ref|ZP_06696955.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|260076961|gb|EEW64684.1| valyl-tRNA synthetase [Enterococcus faecium TC 6]
 gi|289161656|gb|EFD09534.1| valyl-tRNA synthetase [Enterococcus faecium D344SRF]
 gi|291591439|gb|EFF23095.1| valyl-tRNA synthetase [Enterococcus faecium E1636]
 gi|291596424|gb|EFF27677.1| valyl-tRNA synthetase [Enterococcus faecium E1679]
 gi|291600595|gb|EFF30899.1| valyl-tRNA synthetase [Enterococcus faecium E1039]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 45/109 (41%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   E++E  
Sbjct: 483 TGYDIIFFWVSRMIFQSLEFTGERPFENVLIHGLIRDEQGRKMSKSLGNGIDPMEVIE-- 540

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +        + + F+ +++  +   ++K    S 
Sbjct: 541 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKIWNASR 583


>gi|237798422|ref|ZP_04586883.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021274|gb|EGI01331.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 372

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|228987710|ref|ZP_04147821.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|228771984|gb|EEM20439.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 867

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|224045554|ref|XP_002199212.1| PREDICTED: similar to leucyl-tRNA synthetase 2, mitochondrial
           [Taeniopygia guttata]
          Length = 903

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 52/174 (29%), Gaps = 24/174 (13%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--D 77
           D S  + YV     Y     H+G+ R   + D + R  +          V N    D   
Sbjct: 77  DKSRPKFYVLSMFPYPSGKLHMGHVRVYTISDAVARFQKMRG-----MQVINPMGWDAFG 131

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
              E A  EH   P        T  N Q   K    L  L+ T +   T  +P+     Q
Sbjct: 132 LPAENAAVEHGLHPA-----SWTQSNIQHMRKQFDALG-LSFTWEREVTTCLPEYYKWTQ 185

Query: 138 ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                +   G  Y+    +              +  ++D+     R   K  +K
Sbjct: 186 YLFLKLFEAGIVYQKEALVNWDPVDQT----VLANEQVDDNGCSWRSGAKVEQK 235


>gi|52141048|ref|YP_085781.1| valyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81824177|sp|Q633Y6|SYV_BACCZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51974517|gb|AAU16067.1| valine--tRNA ligase (valyl-tRNA synthetase) [Bacillus cereus E33L]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|332157706|ref|YP_004422985.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
 gi|331033169|gb|AEC50981.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
          Length = 629

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  I+ DV+ R+LR+         V+N   IDD  ++ A+     + + D   
Sbjct: 133 PLHMGHARNAILGDVMARILRFLGY---TVEVQNY--IDDLGVQFAQVYWGYLNLRDKFD 187

Query: 98  IITS 101
            I  
Sbjct: 188 EIME 191


>gi|331701260|ref|YP_004398219.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329128603|gb|AEB73156.1| Valyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 886

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      I QS          ++ +H    + +GRKMSKS GN I   ++
Sbjct: 484 DTLVTGYDIIFFWVSRMIFQSLEFTHERPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDV 543

Query: 292 LETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  + +     + + F+  ++  A   ++K    S 
Sbjct: 544 ID-------KYGADALRWFLSIGGTPGQDLKFSYDKMDSAWNFINKIWNASR 588


>gi|324328361|gb|ADY23621.1| valyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   E++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|294793183|ref|ZP_06758329.1| isoleucine--tRNA ligase [Veillonella sp. 6_1_27]
 gi|294794787|ref|ZP_06759922.1| isoleucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294454149|gb|EFG22523.1| isoleucine--tRNA ligase [Veillonella sp. 3_1_44]
 gi|294456128|gb|EFG24492.1| isoleucine--tRNA ligase [Veillonella sp. 6_1_27]
          Length = 944

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 47/127 (37%), Gaps = 21/127 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          ++  H   ++ EGRKMSKS GN +  +++++        + A V+RL +
Sbjct: 591 AVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDV-------YGADVMRLWV 643

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
               Y+  +  +   + +   +  K   T           L    +D N        +A+
Sbjct: 644 SSADYQADVRLSKDIVKQLSEVYRKIRNTFR--------FLLGNLDDFNPNTDKVAYAAM 695

Query: 366 QALHKLA 372
               K A
Sbjct: 696 SEFDKWA 702


>gi|219114111|ref|XP_002176232.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217402807|gb|EEC42785.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 350

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
              I  L+ ERL     ++F+ AD IR  LESKG  +
Sbjct: 187 EEKINALLAERLQCKLSRRFADADRIRDLLESKGVYV 223



 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 9/53 (16%)

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLES-KGFILEDYKNPDNGQRMTRWK 458
             +  L+  RL   KM++F  AD I  +L    G  +          R   W+
Sbjct: 102 EKVHALLASRLQAKKMRQFDEADNICDELLRVHGVTV--------WDRDKTWR 146



 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 9/39 (23%), Positives = 16/39 (41%)

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
             L       IE L+  R +  + + +  AD I+  L+ 
Sbjct: 262 AALTAEEIKTIENLLARRSLARQNQNYKLADGIQDDLKK 300


>gi|206970493|ref|ZP_03231446.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206735070|gb|EDZ52239.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 544

 Score = 42.9 bits (100), Expect = 0.098,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|330969449|gb|EGH69515.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 868

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIDYMKTQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|322372403|ref|ZP_08046939.1| valine--tRNA ligase [Streptococcus sp. C150]
 gi|321277445|gb|EFX54514.1| valine--tRNA ligase [Streptococcus sp. C150]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    +     Y   
Sbjct: 424 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|319779340|ref|YP_004130253.1| Leucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317109364|gb|ADU92110.1| Leucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 896

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + D+L R LR       +          D     
Sbjct: 50  KPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRQLRMKGYNVLMPMGW------DAFGMP 103

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLIQ---- 137
           A  E+ +I      +  T  N     K    +         R      P+     Q    
Sbjct: 104 A--ENAAIKSKVPPAEWTYANIDYMKKQLQAMGF--AIDWSREFAACDPEYYKWNQWMFL 159

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 160 KMLEKGIAYRKTQTVNWD 177


>gi|291530000|emb|CBK95585.1| methionyl-tRNA synthetase [Eubacterium siraeum 70/3]
          Length = 642

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 18/125 (14%), Positives = 37/125 (29%), Gaps = 13/125 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    +  D + R  R    +     V  +T  D+      + E  +         
Sbjct: 18  PHIGHCYTTVACDTIARFKRMQGYD-----VMFLTGTDEH---GQKIELKAAEKGVTPKE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NNEIIF 154
              +    F +    +         R T+  HI  +  + + +   G+ Y+     +   
Sbjct: 70  YVDEIVANFKRLWETMHISY-DRFIRTTDDYHIETVQKIFRKLYEKGYIYKGTYKGKYCT 128

Query: 155 DTSSI 159
              S 
Sbjct: 129 PCESF 133



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 14/99 (14%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYRE 318
                   +G++N  G KMSKS GN +    L E        +    +R  +L    Y  
Sbjct: 279 PLPKHLYGHGWINFNGDKMSKSKGNVVDPFVLCER-------YGVDAVRYQILRDMPYGS 331

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
             +FT + +      L++      +      +   A+ +
Sbjct: 332 DCNFTNELM------LTRINADLANDLGNLVSRTVAMAD 364


>gi|293401447|ref|ZP_06645590.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305085|gb|EFE46331.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 874

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 78/212 (36%), Gaps = 30/212 (14%)

Query: 186 KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           ++P D   WK+   +   W S   W     GW  E +   + Y     D+   G D+IF 
Sbjct: 431 EDPQDQENWKQDEDVLDTWFSSALWPFSTLGW-PENTDDLARYFPN--DLLVTGYDIIFF 487

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
                  Q+    +     ++ IH    + +GRKMSKS GN I   ++++        + 
Sbjct: 488 WVARMAFQTRYCMKNRPFKDVLIHGLVRDPQGRKMSKSLGNGIDPMDVID-------HFG 540

Query: 304 APVIRLAMLMTH-YREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNT 361
              +R  +       + + ++ +++  +   ++K W  +  +   +  A       D++ 
Sbjct: 541 VDALRFFLTTNSTPGQDLRYSDEKVEASWNFINKIWNASRFALMQLGDAFH---LEDIDV 597

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILG 393
            +A   + K             I      +LG
Sbjct: 598 SNA-SMIDKW------------ILKRFNEVLG 616


>gi|326201136|ref|ZP_08191008.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
 gi|325988704|gb|EGD49528.1| valyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 73/206 (35%), Gaps = 34/206 (16%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I       + E    ++IH    + +GRKMSKS GN I   E+
Sbjct: 482 DVLVTGYDIIFFWVARMIFSGMEHMKQEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEV 541

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +         +    +R A+ + +   P   + ++ +++  A    +K    S       
Sbjct: 542 IA-------QYGTDALRFALTIGN--SPGNDLRYSPEKVEAARNFANKVWNASR------ 586

Query: 349 PAVLSALYNDLNTVSA------------IQALHKLARESTKNHDLLPI---FNASAHILG 393
             VL     DL+                +  ++ + +E T+N +   +          + 
Sbjct: 587 -FVLMNFDEDLDFSKVDKKKFSIADKWIMSRINTVTKEVTENIEKFELGLGLQKVYDFIW 645

Query: 394 IEVCKEHLNKNISIAIEKLVQERLIL 419
            E C  ++        ++  + RL  
Sbjct: 646 EEFCDWYIEMVKPKLYDRESEGRLEA 671


>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
 gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
          Length = 764

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 13/131 (9%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              +F+     +AE     +   +    +I   +   L+N + T+  +      +++ + 
Sbjct: 126 SKFNFSNTTERQAENFRRMFLAMAQDIRVIVVKLADRLHN-MRTLEFMSE----SKQRSI 180

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNK--------NISIAIEKLVQERLILLKMKKFSSAD 429
             +   IF   A+ LGI   K  L               I+  V +R    + K  + AD
Sbjct: 181 ALETREIFAPLANRLGIGRLKWELEDLAFKYIEPEAYREIQIRVADRRATREEKLAALAD 240

Query: 430 YIRKQLESKGF 440
            +R ++E  G 
Sbjct: 241 ILRDRMEKSGI 251


>gi|158425863|ref|YP_001527155.1| isoleucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|158332752|dbj|BAF90237.1| isoleucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 1016

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN +    +++          A ++RL +
Sbjct: 660 SCGTRGRPPYDAVLTHGFVLDEDGRKMSKSLGNVVAPQTVIKDSG-------ADILRLWV 712

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +    + L        K   T
Sbjct: 713 CASDYSDDLRIGPEILKTTADTYRKLRNT 741


>gi|157693425|ref|YP_001487887.1| leucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157682183|gb|ABV63327.1| leucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 849

 Score = 42.9 bits (100), Expect = 0.099,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 602 KEPFMKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHG-------ADTLRLYEMFMGPL 654

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W   +   G I   V  
Sbjct: 655 DASIAWSETGLDGARRFLDRVWRLFTNEDGTISDKVTE 692


>gi|332289541|ref|YP_004420393.1| leucyl-tRNA synthetase [Gallibacterium anatis UMN179]
 gi|330432437|gb|AEC17496.1| leucyl-tRNA synthetase [Gallibacterium anatis UMN179]
          Length = 860

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 54/153 (35%), Gaps = 43/153 (28%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKWPQTS------TSKGIIDPAVLSA---------------LYND---- 358
              +  A   L +  + +       +   +DP  LSA               + +D    
Sbjct: 660 ESGVEGANRFLRRLWKLTYDYLQQPATVELDPKALSADQKALRRDLHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKNHDLLPIFNASA 389
              NT  AI A+ +L  + TK   +     A  
Sbjct: 720 QTFNT--AIAAIMELMNKLTKAPLVQEQDRAVM 750


>gi|319956024|ref|YP_004167287.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
 gi|319418428|gb|ADV45538.1| leucyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
          Length = 812

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 64/169 (37%), Gaps = 21/169 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E  + + +  G +  +G KMSKS G
Sbjct: 527 PVDQYIGGIEHAILHLLYARFFTKALRDLGYHDIDEPFSRL-LTQGMVLKDGAKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  + ++E        + A   RL +L     ++ +++    +  A   L K     +
Sbjct: 586 NTVDPDAIVER-------YGADTARLFILFAAPPQKELEWKDSGVEGAYRFLKKLY---S 635

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQA---LHKLARESTKNHDLLPIFNAS 388
            K  +    L  + +D     A +A   +++  R+S   ++    FN  
Sbjct: 636 RKEKVSHRSLPEIDHDALAPEAKEARAKVYEALRKSGDVYEKTFAFNTL 684



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 39/149 (26%), Gaps = 26/149 (17%)

Query: 16  TEFQAID----PSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
             F+  +    P    + M+   P      H+G+ R   + D L R  R           
Sbjct: 20  RAFEPSEDQSLPKKYILSMF---PYPSGRIHMGHVRNYAIGDALARYWRKQG-------- 68

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC------LAPTHQP 123
            N+             E+ +I         T  N     K+   L           T  P
Sbjct: 69  VNVLHPIGWDAFGMPAENAAIKHKRHPKEWTYDNIAYMRKELGALGLSFSKEREFATCDP 128

Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEI 152
             T    +    I  +   G  Y  +  +
Sbjct: 129 LYTRWEQE---FIIRMFEGGLLYRESTTV 154


>gi|42521981|ref|NP_967361.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|60390711|sp|Q6MQU3|SYL_BDEBA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|39574511|emb|CAE78015.1| leucyl-rRNA synthetase [Bdellovibrio bacteriovorus HD100]
          Length = 796

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 52/139 (37%), Gaps = 15/139 (10%)

Query: 256 DRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LM 313
              E    +  H G  L  +G KMSKS GN I+  ++        RS  A  +R  +  M
Sbjct: 548 THDEPFQKL-AHQGMILGPDGEKMSKSRGNVISPEDI-------ARSHGADALRTFISFM 599

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
               +   +    +   +  L +  +   +      A   AL     T    + +HK  +
Sbjct: 600 GPVDKDKPWAPTGIDGVKRFLDRITRLVVNDDGQLVATSEAL-----TPEIEKLVHKTIK 654

Query: 374 ESTKNHDLLPIFNASAHIL 392
           + T++ + +    A + ++
Sbjct: 655 KVTEDIESMSFNTAISAMM 673


>gi|33861424|ref|NP_892985.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|33634001|emb|CAE19326.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 511

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D++  H     A    A  ++    ++ H GFL  EG+KM KS GN +  + L
Sbjct: 254 DIHLIGKDILRFHAVYWPAMLISA-GMKVPKKVYGH-GFLTREGQKMGKSLGNVLDPDIL 311

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           L         +    +R  +L
Sbjct: 312 LS-------KYGKEAVRWYLL 325


>gi|88860574|ref|ZP_01135212.1| leucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817772|gb|EAR27589.1| leucyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 862

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 17/146 (11%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    ++E        + A  +RL M+      + ++++   +  A  
Sbjct: 619 GMSKMSKSKNNGIDPQSVIE-------QYGADTVRLFMMFTAPPEQTLEWSDSGVEGAHR 671

Query: 333 LLSKW--PQTSTSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFN-AS 388
            + +         +       +SAL    N   A+ + LHK   + + + D    FN A 
Sbjct: 672 FVKRVWKYAYDVKQAGFASLDVSALN---NEQKALRRELHKAIAKVSDDLDRRQTFNTAI 728

Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQ 414
           A ++  E+  +    ++    +K + 
Sbjct: 729 AAVM--ELLNKLTRASLETEQDKAIA 752


>gi|317405767|gb|EFV86058.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 885

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 17/143 (11%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + D++ R LR       +          D
Sbjct: 33  PDGSEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------D 86

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLI 136
                A  E+ +I      +  T  N     K    +         R      P+     
Sbjct: 87  AFGMPA--ENAAIKSKVPPAKWTYDNIAYMKKQMKAMGL--AIDWSREMCACDPEYYKWN 142

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 143 QWLFLKMLEKGVAYRKTQVVNWD 165


>gi|228965530|ref|ZP_04126612.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794123|gb|EEM41644.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 517

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 60/372 (16%), Positives = 107/372 (28%), Gaps = 61/372 (16%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLAC----LAPT 120
             R +    D    +     P   I D     +       ++F K           +   
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIGVEFIYQH 127

Query: 121 HQPRATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGS--FSRR 168
            + R+  +   ++           I      G   E         T      G    +  
Sbjct: 128 DEYRSGRYNENILEALYKRKDIYDILMDFKTGECSEEERESFYPATLYCERCGKDTTTIT 187

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
             DE     R   +   +     +    +  M+  W+  W      W IE          
Sbjct: 188 HFDEVLKTIRYECECGNEKELSVL---NTNKMKLNWKIDWPMR---WMIEEVVFEP---- 237

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFI 286
                  GG D         +++        + A  ++   F+ ++G   KMS S+GN I
Sbjct: 238 -------GGRDHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSI 290

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTS 343
           T +ELL       + +   VI        YR    F     + +        +   +  +
Sbjct: 291 TPSELL-------KVYLPEVILFMF--AKYRPNAAFHIGLDEDVIRNYTEYERLKDSYEN 341

Query: 344 KGIIDPAVLSAL 355
           K +    +L A+
Sbjct: 342 KTLKSEDLLDAI 353


>gi|222153825|ref|YP_002563002.1| leucyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|254782864|sp|B9DW16|SYL_STRU0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222114638|emb|CAR43674.1| leucyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 833

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 43/124 (34%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +       T  + G +D             + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKEMTGDNSGALDKVYHETVKAVTEQIESM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EDKL 721


>gi|157150214|ref|YP_001451053.1| leucyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|189083156|sp|A8AZ43|SYL_STRGC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157075008|gb|ABV09691.1| leucyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 833

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 69/215 (32%), Gaps = 60/215 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +   +K ++                +V   L     NT  AI  L      + K  
Sbjct: 662 DRVYRLLNTKELVTENSGALDKVYHETVKSVTEQLEELKFNT--AIAQLMIFVNAANKEE 719

Query: 380 DL--------LPIFNASAHILGIEVCKEHLNKN----------------ISIAIEKLVQE 415
            L        + +    A  L  E+ +     +                +   +E +VQ 
Sbjct: 720 KLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTDESISYVAWPTYDESKLVEAEVEIVVQI 779

Query: 416 ----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               R  L+  K  S     R++L+     L D K
Sbjct: 780 KGKVRAKLVVAKDLS-----REELQE--IALADEK 807


>gi|152992719|ref|YP_001358440.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151424580|dbj|BAF72083.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 649

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 38/128 (29%), Gaps = 18/128 (14%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D AHIG+A   I+ D L R  R    +   T+    TD         + E  +     
Sbjct: 17  VNDIAHIGHAYTTIIADTLARYSRMSGLD---TFFLTGTD-----EHGQKIEESAKARGK 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                  + +  F                R T  +H+  +    + +  +G       +I
Sbjct: 69  TSQEYADEISATFKNLWDDFGISY-DKFIRTTDADHMKGVQKAFKVMYDNG-------DI 120

Query: 153 IFDTSSIP 160
             D     
Sbjct: 121 YKDVYKGH 128


>gi|301778633|ref|XP_002924737.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
           melanoleuca]
          Length = 1212

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 53/163 (32%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A           A     NG L L   KMSKS 
Sbjct: 700 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPAAVR--ANGHLLLNSEKMSKST 757

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 758 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 787

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 788 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 820


>gi|291387563|ref|XP_002710331.1| PREDICTED: leucyl-tRNA synthetase [Oryctolagus cuniculus]
          Length = 1178

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 666 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 723

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 724 GNFLTLMQAVD-------KFSADGMRL----------------ALADAGDTVE------- 753

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 754 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 786


>gi|282857419|ref|ZP_06266652.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282584704|gb|EFB90039.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 651

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 62/200 (31%), Gaps = 55/200 (27%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +   A ++ H G+   +G KMSKS GN +  +E++         + + V R  +L  
Sbjct: 276 ALGLTPPACVYSH-GWWTRDGEKMSKSKGNVVDPHEMVGL-------YGSDVFRYFLL-- 325

Query: 315 HYRE-----PIDFTVQRLTE------------------------------AEILLSKWPQ 339
             R+       DF+   L +                              A   L     
Sbjct: 326 --RQVTFGFDGDFSELALVQRVNSDLANDLGNLLSRTVTMIEKYRGGAVPAPAALESLDV 383

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
               + +   A   A  ++     A++AL  +   + K  D           LG     E
Sbjct: 384 EVKEQALNAFAEYRAFMDNYQFDDALKALWSMIGRANKYID-----ETMPWKLG---KDE 435

Query: 400 HLNKNISIAIEKLVQERLIL 419
            L   +   +  L +E  + 
Sbjct: 436 SLAARLDTVLATLAEELKLA 455



 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D + R  R      C  +    TD         +    +     
Sbjct: 15  VNDVPHIGHAYTTIAADAMARYKRMDG---CDVFFLTGTD-----EHGQKVSESAAKKGM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +T +  Q F +D   L   +     R T   H+  +  + + ++  G  Y+   + 
Sbjct: 67  TPQQLTDELAQNF-RDLLPLIDASNDDFIRTTEARHVKVVQQIFKKLLDQGDIYKGTYKG 125

Query: 153 IFDT 156
            +  
Sbjct: 126 WYCV 129


>gi|260655517|ref|ZP_05861005.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629965|gb|EEX48159.1| arginine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 561

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 58/327 (17%), Positives = 98/327 (29%), Gaps = 55/327 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   V DV+  +L +   +    Y  N   +   I+ ++         
Sbjct: 133 PT--GPLHVGHGRGAAVGDVVGNILAFAGWKVEKEYYVNDAGLQINILAKSILARYFELQ 190

Query: 93  NDA-----ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
                        +     ++ D  R          R    +      + +      AY 
Sbjct: 191 GCPEKLPFDDAPGAMYKGAYIYDEAR----------RVIEAVGN--KFVNSSQDEALAYL 238

Query: 147 --EANNEIIFDTSS-IPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFILWK 195
                  I+ +  S +  +G    +   E+ +  R   +               D  LW 
Sbjct: 239 RQFGAQHILENIKSDLARFGVKFNQFFSEKSLYERDLVRKAVETLREAGYVYEKDGALWY 298

Query: 196 RSTPMEPGWESPWGR--GRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQ 251
           RST      +    R  G P +     A       + FD  I   G D    HH      
Sbjct: 299 RSTDFGDDKDRVLFRSTGEPTYFASDVAYHKEKFDRGFDRVIDVWGCD----HHGYVPRI 354

Query: 252 SCCADRIEKTANIW--IHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGRSWPAP 305
           +     + K A  +  +   F+NL  +G+   MS   G F T+  LL+            
Sbjct: 355 NAALRGLGKDAGDFNVLLIQFVNLVKDGQIVGMSTRGGKFETLASLLDEVGV-------D 407

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEI 332
             R   LM      +DF    + +A+ 
Sbjct: 408 AARYYFLMRRSDSQLDF---DMDQAKR 431


>gi|156937259|ref|YP_001435055.1| lysyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566243|gb|ABU81648.1| lysyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 496

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 13/129 (10%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           L + + E          +   G T    AH+G     I    + + LR    +    +V 
Sbjct: 4   LNKIVDEIIKKRGGRAFVVASGLTTSGPAHLGTLSEFIYPYSIVQELRRRGYDAEFVFVA 63

Query: 71  NITDIDDKIIE--RARQEHPSIPIND----------AISIITSKNTQQFVKDTTRLACLA 118
           +I D  D I +  + ++E     +                       +F++   +     
Sbjct: 64  DIMDAFDDIPQTLKDKEEELKKHLGKPLAEVPDPYGCHESYGEHFLAEFLELMDKFGIK- 122

Query: 119 PTHQPRATN 127
           P    RA+ 
Sbjct: 123 PDEVLRASE 131


>gi|121596203|ref|YP_988099.1| leucyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|166230604|sp|A1WCP8|SYL_ACISJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120608283|gb|ABM44023.1| leucyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 910

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 42/143 (29%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D +  + Y C    Y     H+G+ R   + D+L R LR       +          
Sbjct: 26  VTEDQAKPKFYACSMLPYPSGKLHMGHVRNYTINDMLTRSLRMKGHNVLMPMGW------ 79

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
           D     A  E+ ++      +  T  N     K    +  LA           P      
Sbjct: 80  DAFGLPA--ENAALKNGVPPAQWTYDNIAYMKKQMQAMG-LAIDWSREIATCDPDYYKWN 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 137 QWLFLKMLDKGIAYRKTQVVNWD 159


>gi|85373086|ref|YP_457148.1| valyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
 gi|84786169|gb|ABC62351.1| valyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
          Length = 778

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 10/98 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E + +  HY     D+   G D++F      +        ++    +++H      
Sbjct: 502 GWPDETALLEKHY---PNDLLISGFDILFFWDARMMMAGYYNTGLKPWPKLYLHGLVRAA 558

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +G KMSKS GN +    L++        + A  +R  M
Sbjct: 559 DGAKMSKSKGNVVDPLGLID-------QYGADALRFFM 589


>gi|66047579|ref|YP_237420.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75500570|sp|Q4ZN90|SYL_PSEU2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|63258286|gb|AAY39382.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
           [Pseudomonas syringae pv. syringae B728a]
          Length = 868

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIDYMKTQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|118581995|ref|YP_903245.1| isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118504705|gb|ABL01188.1| Isoleucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 924

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 36/84 (42%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 ++  H   L+ +GRKMSKS GN +   +++       + + A ++RL +    Y
Sbjct: 581 GSAPYKSVLTHGFVLDGQGRKMSKSMGNVVAPEDVI-------KKFGADILRLWVAAQDY 633

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+    + + LT       +   T
Sbjct: 634 RDDNRISQEILTRVAEAYRRIRNT 657


>gi|229062152|ref|ZP_04199476.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
 gi|228717135|gb|EEL68811.1| Valyl-tRNA synthetase [Bacillus cereus AH603]
          Length = 867

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 17/145 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    +     D    G D+IF      I Q           ++ IH    + 
Sbjct: 451 GWPNEDAADFKKF--YSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDE 508

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   +++E        + A  +R  +       + + F+++++     
Sbjct: 509 QGRKMSKSLGNGIDPMDVIE-------KYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN 561

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYN 357
            ++K    S         VL  + +
Sbjct: 562 FINKIWNASR-------FVLMNMDD 579


>gi|229013673|ref|ZP_04170802.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
 gi|229135303|ref|ZP_04264098.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228648172|gb|EEL04212.1| Valyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
 gi|228747595|gb|EEL97469.1| Valyl-tRNA synthetase [Bacillus mycoides DSM 2048]
          Length = 867

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 17/145 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    +     D    G D+IF      I Q           ++ IH    + 
Sbjct: 451 GWPNEDAADFKKF--YSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDE 508

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   +++E        + A  +R  +       + + F+++++     
Sbjct: 509 QGRKMSKSLGNGIDPMDVIE-------KYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN 561

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYN 357
            ++K    S         VL  + +
Sbjct: 562 FINKIWNASR-------FVLMNMDD 579


>gi|229169200|ref|ZP_04296914.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
 gi|228614266|gb|EEK71377.1| Valyl-tRNA synthetase [Bacillus cereus AH621]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 17/145 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    +     D    G D+IF      I Q           ++ IH    + 
Sbjct: 465 GWPNEDAADFKKF--YSTDALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDE 522

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN I   +++E        + A  +R  +       + + F+++++     
Sbjct: 523 QGRKMSKSLGNGIDPMDVIE-------KYGADAMRYFLSTGSAPGQDLRFSMEKVESTWN 575

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYN 357
            ++K    S         VL  + +
Sbjct: 576 FINKIWNASR-------FVLMNMDD 593


>gi|228478388|ref|ZP_04062996.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
 gi|228250067|gb|EEK09337.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    +     Y   
Sbjct: 424 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|329725485|gb|EGG61965.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 805

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGESNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVASHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLII 636

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
           T +  I+  ++ +                  D +T+S   AI  L     E  K +++
Sbjct: 637 TDENSINKKIVDSNNHSLDKVYNQTVKKVTEDFDTLSFNTAISQLMVFINECYKTNEV 694


>gi|281347267|gb|EFB22851.1| hypothetical protein PANDA_014128 [Ailuropoda melanoleuca]
          Length = 1174

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 53/163 (32%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A           A     NG L L   KMSKS 
Sbjct: 662 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPAAVR--ANGHLLLNSEKMSKST 719

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 720 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 749

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 750 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 782


>gi|212697092|ref|ZP_03305220.1| hypothetical protein ANHYDRO_01657 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675867|gb|EEB35474.1| hypothetical protein ANHYDRO_01657 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 802

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 12/137 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L  + +KMSKS GN +  ++++       R + A  +R   M +  +
Sbjct: 561 KEPYKKRTSHGMILGEDHQKMSKSRGNVVNPDDIV-------RDYGADTLRAYEMFIGDF 613

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--AVLSALYNDLNTVSAIQALHKLARE 374
           R    ++ + +      L +           D     L  L N   T+  +   ++  + 
Sbjct: 614 RSTAPWSDEGVKGCRKYLERVFNLYDLVEDGDEYTNELEILIN--QTIKKVSEDYESLKY 671

Query: 375 STKNHDLLPIFNASAHI 391
           +T    L+ + N   +I
Sbjct: 672 NTAIAALMSLLNEMRNI 688


>gi|50365371|ref|YP_053796.1| arginyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81391744|sp|Q6F0R1|SYR_MESFL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50363927|gb|AAT75912.1| arginyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 553

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 27/86 (31%), Gaps = 2/86 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT   F H+G+AR  +   VL  +L++   E    +  N       I+      H    +
Sbjct: 124 PT--GFLHVGHARNAVTGSVLEEVLKFDGYEVQTEFYTNDAGNQINILAVTVFVHYLWAL 181

Query: 93  NDAISIITSKNTQQFVKDTTRLACLA 118
                   +     F  D   +    
Sbjct: 182 GIETEKPANTYGGTFYDDLANIMIQK 207


>gi|289675763|ref|ZP_06496653.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 313

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 40/140 (28%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           +N+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--------KNVLQPLGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIDYMRTQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|256059565|ref|ZP_05449764.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261323533|ref|ZP_05962730.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
 gi|261299513|gb|EEY03010.1| isoleucyl-tRNA synthetase [Brucella neotomae 5K33]
          Length = 972

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 ALAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|138894671|ref|YP_001125124.1| isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
 gi|166200211|sp|A4IM25|SYI_GEOTN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134266184|gb|ABO66379.1| Isoleucyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
          Length = 924

 Score = 42.9 bits (100), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/190 (16%), Positives = 63/190 (33%), Gaps = 38/190 (20%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++E          A ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLG-------ADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------STSKGIIDPAVL 352
               Y+  +  +   L +   +  K   T                       G +D  +L
Sbjct: 621 ASVDYQADVRISDNILKQVSEVYRKIRNTFRFMLGNLFDFDPNQNAVPVGELGELDRYML 680

Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
           + L            L    +++  ++D   +++   H   +E+   +L+    I   + 
Sbjct: 681 AKLN----------KLIAKVKKAYDSYDFAAVYHEMNHFCTVELSAFYLDMAKDILYIEA 730

Query: 413 VQERLILLKM 422
              R    + 
Sbjct: 731 ADCR--ARRA 738


>gi|308095126|ref|ZP_07663172.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
 gi|308088891|gb|EFO38586.1| isoleucine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
          Length = 358

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 7/86 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +     +  H   ++  GRKMSKS GN +   ++            A ++RL +  T Y
Sbjct: 3   GVAPYKQVLTHGFVVDGHGRKMSKSIGNVVAPKDVTNKLG-------ADILRLWVASTDY 55

Query: 317 REPIDFTVQRLTEAEILLSKWPQTST 342
              +  + + L  +     +   T+ 
Sbjct: 56  TGEVAVSDEILKRSADAYRRIRNTAR 81


>gi|33863015|ref|NP_894575.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|33634932|emb|CAE20918.1| putative methionyl-tRNA synthetase [Prochlorococcus marinus str.
           MIT 9313]
          Length = 515

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 59/334 (17%), Positives = 95/334 (28%), Gaps = 76/334 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+    +  D L R  R          V  +T +D+      + +  +   N 
Sbjct: 13  VNDKPHLGSLYTTMASDALARFQRLEG-----KQVMFVTGVDEH---GQKIQRTAEGNNI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
           +      + T+ +    +R          R T+H  Q++       +   G  Y    + 
Sbjct: 65  SPKHHCDQITRSYQNLWSRWGISN-DRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQG 123

Query: 153 IFDTSSIPNYGSFSRRK------IDEQKMGTRVPEK------------YHKKNPADFILW 194
            +       Y     +       I ++ +  R  E                 +  DF +W
Sbjct: 124 WYCVG-CEEYKDEPPQAQSPCCPIHQKPLEWRDEENLFFKLSRFQSKIEDLISQPDF-IW 181

Query: 195 KRSTPMEP--------------GWESPWGRGRPG--------WHIECSAMSSHYL----- 227
                 E                 +  WG   PG        W        S  L     
Sbjct: 182 PVMRRNEIQNFVAQGLRDFSISRVDVDWGLPVPGYPKHTFYVWFDALVGYLSALLDDGGQ 241

Query: 228 ---------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
                    G    +H  G D++  H     A    A            +GFL  EG+KM
Sbjct: 242 VRIERLEECGWPASVHLIGKDILRFHAVYWPAMLISA--GLPLPKQVFGHGFLTREGQKM 299

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            KS GN +   +LLE          A  +R  +L
Sbjct: 300 GKSLGNVLDPEKLLEICG-------ADAVRWYLL 326


>gi|332202451|gb|EGJ16520.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|322392565|ref|ZP_08066025.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144557|gb|EFX39958.1| valine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|299065945|emb|CBJ37126.1| Isoleucine--tRNA ligase [Ralstonia solanacearum CMR15]
          Length = 960

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN I   E+            A +IRL +  T 
Sbjct: 613 YGKPPYKALLTHGFTVDGEGRKMSKSIGNTIAPQEIAGKMG-------AEIIRLWVASTD 665

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 666 YSGELAISDEILKRVVESYRRIRNT 690


>gi|229082281|ref|ZP_04214744.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228700713|gb|EEL53236.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 544

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|219111573|ref|XP_002177538.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217412073|gb|EEC52001.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 345

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
              I  L+ ERL     ++F+ AD IR  LESKG  +
Sbjct: 187 EEKINALLAERLQCKLSRRFADADRIRDLLESKGVYV 223



 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 9/53 (16%)

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLES-KGFILEDYKNPDNGQRMTRWK 458
             +  L+  RL   KM++F  AD I  +L    G  +          R   W+
Sbjct: 102 EKVHALLASRLQAKKMRQFDEADNICDELLRVHGVTV--------WDRDKTWR 146


>gi|171693671|ref|XP_001911760.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946784|emb|CAP73588.1| unnamed protein product [Podospora anserina S mat+]
          Length = 948

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 46/162 (28%), Gaps = 22/162 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + H+G+ R   + DV+ R       +  +       D      E A  E      
Sbjct: 84  PYPSGYLHLGHLRVYTIADVVARFHSLRGHDVLLPMGW---DAFGLPAENAAIER----- 135

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT------NHIPQMIYLIQNIILHGHAY 146
               +  T  N  +  +    +       +  AT       H  ++  L   +   G AY
Sbjct: 136 GIDPATWTKSNIAKMKEQLDVMNGSWDWSRELATCDPSFYKHTQKIFLL---LREQGLAY 192

Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           +   E+              +  ++D      R   K  K+ 
Sbjct: 193 QDEAEVNYDPVDKT----VLANEQVDANGCSWRSGAKVEKRK 230


>gi|149021523|ref|ZP_01835578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930219|gb|EDK81204.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|148990086|ref|ZP_01821340.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147924612|gb|EDK75699.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|149012557|ref|ZP_01833554.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
 gi|147763362|gb|EDK70299.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|167648985|ref|YP_001686648.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189082990|sp|B0T6E7|SYL_CAUSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|167351415|gb|ABZ74150.1| leucyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 861

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 42/144 (29%), Gaps = 14/144 (9%)

Query: 18  FQAIDP-SNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
              I P +  + YV    P      H+G+ R   + DV+ R  R       V +     D
Sbjct: 24  LTPITPDARPKYYVLEMFPYPSGRIHMGHVRNYAMGDVVARYKRAQGFN--VLHPMGW-D 80

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQ 131
                 E A  E    P        T  N     +    L       +  AT    +  +
Sbjct: 81  AFGMPAENAAMERGVHPKG-----WTYDNIAAMREQLKALGLSIDWSREFATCDPEYYGK 135

Query: 132 MIYLIQNIILHGHAYEANNEIIFD 155
                 +++  G  Y     + +D
Sbjct: 136 QQAWFLHLLKRGLVYRKEASVNWD 159


>gi|57042751|ref|XP_535229.1| PREDICTED: similar to Leucyl-tRNA synthetase, cytoplasmic
           (Leucine--tRNA ligase) (LeuRS) [Canis familiaris]
          Length = 1176

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 53/163 (32%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A           A     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPAAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|332076405|gb|EGI86868.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|306830047|ref|ZP_07463233.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
 gi|304427760|gb|EFM30854.1| valine--tRNA ligase [Streptococcus mitis ATCC 6249]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|221231401|ref|YP_002510553.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|220673861|emb|CAR68364.1| valyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|219113839|ref|XP_002186503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209583353|gb|ACI65973.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 601

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 26/47 (55%)

Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
             +      +++ +++R+     +++++AD I K L + G  ++D+K
Sbjct: 78  DASDMDVTFVQQKLEQRISYKAARQWNAADRIEKGLTAMGVEIDDWK 124


>gi|194398081|ref|YP_002037231.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194357748|gb|ACF56196.1| valyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|189025869|ref|YP_001933641.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
 gi|189018444|gb|ACD71062.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
          Length = 528

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
          Y C  G T     HIGN R +I  D++ R LR     K V +V +  D D
Sbjct: 28 YTCASGITPSGTVHIGNFREIISVDLVVRALRDQG--KSVRFVHSWDDYD 75


>gi|168492725|ref|ZP_02716868.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225854110|ref|YP_002735622.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|183577078|gb|EDT97606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|225723634|gb|ACO19487.1| valyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|168490541|ref|ZP_02714684.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|183574795|gb|EDT95323.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|148983947|ref|ZP_01817266.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147924094|gb|EDK75206.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301799625|emb|CBW32180.1| valyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|146324353|ref|XP_747587.2| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|129556234|gb|EAL85549.2| leucyl-tRNA synthetase [Aspergillus fumigatus Af293]
          Length = 988

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 18/151 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +              A      I      +  
Sbjct: 95  HMGHLRVYTISDVLARFYRMRGHE--VLHPMGWDAFGLPAENAA------IERGIDPAEW 146

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI-IF 154
           T +N  +  +    ++      +  AT   P+     Q I       G AY+A   +   
Sbjct: 147 TKQNIAKMKEQLRSISTSFDWDRELATCS-PEFYEHTQRIFLMLYRKGLAYQAEALVNYD 205

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
                      +  ++D      R   K  K
Sbjct: 206 PVDKT----VLANEQVDSNGFSWRSGAKVEK 232


>gi|15900480|ref|NP_345084.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111657453|ref|ZP_01408202.1| hypothetical protein SpneT_02001347 [Streptococcus pneumoniae
           TIGR4]
 gi|81532202|sp|Q97S45|SYV_STRPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14972043|gb|AAK74724.1| valyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|303389510|ref|XP_003072987.1| leucyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
 gi|303302131|gb|ADM11627.1| leucyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
          Length = 873

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 29/69 (42%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DL+  H    +         +        NG+L L   KMSKS+GNF+T++
Sbjct: 497 PVDLRVSGKDLLKNHLIFFLFNHVALFEKKHWPRRIFTNGYLMLNSEKMSKSSGNFLTVD 556

Query: 290 ELLETKKFG 298
           E L      
Sbjct: 557 ESLAKFGVS 565


>gi|159122373|gb|EDP47494.1| leucyl-tRNA synthetase [Aspergillus fumigatus A1163]
          Length = 988

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 44/151 (29%), Gaps = 18/151 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R    E  V +              A      I      +  
Sbjct: 95  HMGHLRVYTISDVLARFYRMRGHE--VLHPMGWDAFGLPAENAA------IERGIDPAEW 146

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI-IF 154
           T +N  +  +    ++      +  AT   P+     Q I       G AY+A   +   
Sbjct: 147 TKQNIAKMKEQLRSISTSFDWDRELATCS-PEFYEHTQRIFLMLYRKGLAYQAEALVNYD 205

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
                      +  ++D      R   K  K
Sbjct: 206 PVDKT----VLANEQVDSNGFSWRSGAKVEK 232


>gi|167569077|ref|ZP_02361951.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 945

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 28/149 (18%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
           L        +   T          +L+ L +              A+++    + L I  
Sbjct: 665 LKRVTEGYRRIRNTLR-------FLLANLSD-----------FDYAKDALPASEWLEIDR 706

Query: 387 ---ASAHILGIEVCKEHLNKNISIAIEKL 412
              A A  L  E+   +        + KL
Sbjct: 707 YAVAFAAQLQTELLAHYEKYEFHPVVAKL 735


>gi|157151226|ref|YP_001449942.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
 gi|157076020|gb|ABV10703.1| valyl-tRNA synthetase [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 882

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|154499847|ref|ZP_02037885.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
 gi|150271445|gb|EDM98702.1| hypothetical protein BACCAP_03504 [Bacteroides capillosus ATCC
           29799]
          Length = 896

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y     D+   G D+IF      I  +C          ++IH    + 
Sbjct: 467 GWPDENSE-DYKYF-YPTDVLVTGYDIIFFWVARMIFSACEHTGKPPFHTVFIHGLVRDD 524

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +GRKMSKS GN I   E+ E        + A  +R  ++  
Sbjct: 525 KGRKMSKSLGNGIDPLEIAE-------KYGADALRFNLVTG 558


>gi|148238671|ref|YP_001224058.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147847210|emb|CAK22761.1| Isoleucyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 968

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 600 SVAVNGHAPYKRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPAYGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 660 WVSSVDYSTDVPIGAGILRQLADVYRKVRNTSR 692


>gi|149003959|ref|ZP_01828767.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147758018|gb|EDK65024.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 568

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 8/76 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A  ++  D+L R  R    E  V YV         I  RA++E      N ++  I
Sbjct: 40  HIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGTPISIRAKKE------NKSVKEI 91

Query: 100 TSKNTQQFVKDTTRLA 115
                ++F +   +L 
Sbjct: 92  ADFYHKEFKETFEKLG 107


>gi|15902536|ref|NP_358086.1| valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116516342|ref|YP_816000.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81450080|sp|Q8DQU7|SYV_STRR6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15458063|gb|AAK99296.1| Valyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076918|gb|ABJ54638.1| valyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|67921387|ref|ZP_00514905.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
 gi|67856499|gb|EAM51740.1| Isoleucyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
          Length = 940

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 46/125 (36%), Gaps = 2/125 (1%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A     L    DI+  G D      ++ +  S   + I     +  H   L+ +G KMS
Sbjct: 534 VAKQREELKYPVDIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEKGYKMS 593

Query: 280 KSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +  N ++       +   + A ++RL +    Y   I      L +   +  K 
Sbjct: 594 KSLGNIVDPNVIINGGNNHKQEPPYGADLVRLWVSSVDYSSDIRIGKTILKQLFDIYRKI 653

Query: 338 PQTST 342
             T+ 
Sbjct: 654 RNTAR 658


>gi|270292202|ref|ZP_06198417.1| valine--tRNA ligase [Streptococcus sp. M143]
 gi|270279730|gb|EFA25572.1| valine--tRNA ligase [Streptococcus sp. M143]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|228955300|ref|ZP_04117308.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804433|gb|EEM51044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 544

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|223993195|ref|XP_002286281.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220977596|gb|EED95922.1| isoleucine-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 1083

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 7/140 (5%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCAD-RIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           LG   DI+  G D      ++ +  S  A+       ++  H   L+ +G KMSKS GN 
Sbjct: 653 LGYPADIYLEGSDQHRGWFQSSLLTSVAANKGQAPYKSVLTHGFVLDEKGFKMSKSLGNV 712

Query: 286 ITINELLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST- 342
           +   +++E    K    ++ A V+RL +    Y   +      + +      K   T+  
Sbjct: 713 VNPLQVIEGGNNKKLEPAYGADVLRLWVASVDYAGDVRVGANIIKQTFESYRKLRNTARY 772

Query: 343 ---SKGIIDPAVLSALYNDL 359
              +    +PA  S  Y DL
Sbjct: 773 LIGNLADFNPATDSIPYEDL 792


>gi|194017807|ref|ZP_03056416.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010459|gb|EDW20032.1| leucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 830

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 583 KEPFMKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHG-------ADTLRLYEMFMGPL 635

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W   +   G I   V  
Sbjct: 636 DASIAWSETGLDGARRFLDRVWRLFTNEDGTISDKVTE 673


>gi|182683501|ref|YP_001835248.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303255236|ref|ZP_07341309.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|303260058|ref|ZP_07346031.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303261242|ref|ZP_07347190.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263907|ref|ZP_07349828.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303267057|ref|ZP_07352928.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303269272|ref|ZP_07355046.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|182628835|gb|ACB89783.1| valyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301801447|emb|CBW34135.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302597777|gb|EFL64850.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302637376|gb|EFL67863.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302638753|gb|EFL69215.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302641169|gb|EFL71542.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302643385|gb|EFL73661.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646312|gb|EFL76538.1| valyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|71908659|ref|YP_286246.1| isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|84029513|sp|Q47BK5|SYI_DECAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71848280|gb|AAZ47776.1| Isoleucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 932

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 34/104 (32%), Gaps = 7/104 (6%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +G KMSKS GN I   ++ +          A ++RL   
Sbjct: 587 CAIDGRAPYKGLLTHGFVVDGKGHKMSKSKGNVIAPQQVSDKMG-------ADILRLWTA 639

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
            T Y   +  + + L        +   T            +A  
Sbjct: 640 STDYSGELTISDEILKRVVEGYRRIRNTLRFLLANVSDFDAATD 683


>gi|323527126|ref|YP_004229279.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323384128|gb|ADX56219.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 945

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTESYRRIRNT 678


>gi|227513097|ref|ZP_03943146.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
 gi|227083672|gb|EEI18984.1| valyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
          Length = 893

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      I QS          ++ +H    + +GRKMSKS GN I   ++
Sbjct: 491 DTLVTGYDIIFFWVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDV 550

Query: 292 LETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  + +     + + F+  ++  A   ++K    S 
Sbjct: 551 ID-------KYGADALRWFLSVGGTPGQDLKFSYDKMDSAWNFINKIWNASR 595


>gi|225860574|ref|YP_002742083.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298229933|ref|ZP_06963614.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298255643|ref|ZP_06979229.1| valyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19A]
 gi|298502363|ref|YP_003724303.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|225728073|gb|ACO23924.1| valyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|298237958|gb|ADI69089.1| valine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
 gi|327390309|gb|EGE88650.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|212645096|ref|NP_001129797.1| hypothetical protein Y105E8A.20 [Caenorhabditis elegans]
 gi|193247911|emb|CAQ76500.1| C. elegans protein Y105E8A.20b, partially confirmed by transcript
           evidence [Caenorhabditis elegans]
          Length = 524

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   ++ DV +R  R  +      +     +   KI + A               
Sbjct: 26  PHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQAALAAKS--TPKQFCDR 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           ++SK +  F  D      L+ T+  R T+  H+  + +    I  +G+ Y++     +  
Sbjct: 84  VSSKFSDLFT-DLE----LSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSI 138

Query: 157 S 157
           +
Sbjct: 139 T 139



 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 11/72 (15%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +     ++IH  +L ++  KMSKS GN +  +E +         + A  +R  +L  
Sbjct: 290 AAGLSLPQKVFIHGHWL-IDNVKMSKSLGNVVNPSEAIT-------KFTAEGLRYFLLKH 341

Query: 315 ---HYREPIDFT 323
               Y    ++ 
Sbjct: 342 GNPSYDCSFNWN 353


>gi|171912969|ref|ZP_02928439.1| isoleucyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
          Length = 922

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSN-GNFITINELLETKKFGGRSWPAPVIRLA 310
           S  A       ++  H   ++  G+K+SKS+ GN      +     +    + A ++RL 
Sbjct: 579 SVVARGAAPYKSVITHGFVVDTSGKKVSKSDQGNDKNAKPMTADHYYN--KYGADLVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y+  + F+ +   +A     +   T
Sbjct: 637 VSSVDYQNEVPFSEELFQQASESYRRLRNT 666


>gi|15639631|ref|NP_219081.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
          Nichols]
 gi|8928369|sp|O83650|SYK_TREPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
          ligase; Short=LysRS
 gi|3322943|gb|AAC65618.1| lysyl-tRNA synthetase (lysS-1) [Treponema pallidum subsp.
          pallidum str. Nichols]
 gi|291060014|gb|ADD72749.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
          Chicago]
          Length = 528

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 4/50 (8%)

Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
          Y C  G T     HIGN R +I  D++ R LR     K V +V +  D D
Sbjct: 28 YTCASGITPSGTVHIGNFREIISVDLVVRALRDQG--KSVRFVHSWDDYD 75


>gi|16081844|ref|NP_394239.1| leucyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
 gi|14423940|sp|Q9HK31|SYL_THEAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10640056|emb|CAC11908.1| leucyl-tRNA synthetase related protein [Thermoplasma acidophilum]
          Length = 910

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 10/128 (7%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI    +  I  H    +         EK     I +G +   G K+SKS GN +++ 
Sbjct: 564 PVDIRLTAIPHISNHLSFYVLNHAAIFPKEKWPAGLIISGLVVSNGAKISKSKGNVVSLL 623

Query: 290 ELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGI 346
           E+        + + A + RL + +       +D+    L       +++        +  
Sbjct: 624 EI-------AKKYSADIYRLYVAVQADISSTMDWNETDLASITRRFNEFKDLMAGFKQDT 676

Query: 347 IDPAVLSA 354
            D     A
Sbjct: 677 SDLTFEEA 684



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 30/99 (30%), Gaps = 6/99 (6%)

Query: 18  FQAIDPSNIR--MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F        +  + V  P      H+G+ R   + D++ R  R       V +       
Sbjct: 33  FVPKMDGRKKFMITVPWPYTNGSLHVGHGRTYTLGDIIARYKRSRNYN--VLFPMGFHQS 90

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
              I+  A  E         I + TS   +   KD   L
Sbjct: 91  GTPIL--AFSERIRAGDRSTIDLYTSYLKEYGEKDIDAL 127


>gi|84516029|ref|ZP_01003390.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84510471|gb|EAQ06927.1| valyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 979

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
             W  G  GW  +  AM   Y     D+   G D++F      +  S      +    I+
Sbjct: 558 GLWPFGTLGWPADDPAM--KYFPG--DVLITGQDILFFWVARMMMMSQAVMAQDPFHTIY 613

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           +H    + +G KMSK+ GN I   ++++        + A  +R 
Sbjct: 614 LHQLVRDAKGEKMSKTKGNVIDPLDMID-------QYGADALRF 650


>gi|319408565|emb|CBI82218.1| Methionyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 519

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 41/121 (33%), Gaps = 14/121 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R    +    +  + TD         + +  +  +N 
Sbjct: 14  PNGAPHIGHAYNAIASDSLARFQRLDGKD---VFFLSGTD-----EHGLKMQQAAEALNI 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
               +  +N+  F K  T+L C       R T    +     Q I       EAN +I  
Sbjct: 66  TPQQLADRNSAIFQKMLTKLNCSNDDF-IRTTE--ERHHRTCQAIWKKM---EANGDIYL 119

Query: 155 D 155
           D
Sbjct: 120 D 120


>gi|306824773|ref|ZP_07458117.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432984|gb|EFM35956.1| isoleucine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 930

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|302348946|ref|YP_003816584.1| Leucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302329358|gb|ADL19553.1| Leucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 962

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 67/197 (34%), Gaps = 16/197 (8%)

Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
             +   ID    G   PE+  K    D++   + +  E         G P   IE +   
Sbjct: 536 YMAYYTIDYLLQGKVNPEQL-KPEFFDYVFLGKGSAEEVS----KSTGLPLELIEAARRE 590

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             Y     D+   G DL+  H    +                  NG++ + G KMSKS G
Sbjct: 591 FTY-WYPVDLRISGKDLMQNHLLFFMYHHAAIFDESLWPRGIGINGWVLINGAKMSKSTG 649

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQT 340
           NFIT+ ++L           A   R+A ++      +D   FT++ +  A   L  W   
Sbjct: 650 NFITLRQMLNEAG-------ADATRIAEVLAGADGGLDDANFTLRDVDTALSDLVDWLDF 702

Query: 341 STSKGIIDPAVLSALYN 357
                        A+ +
Sbjct: 703 VKDNYGKGRDERLAIDD 719


>gi|256822909|ref|YP_003146872.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796448|gb|ACV27104.1| methionyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 674

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 53/153 (34%), Gaps = 29/153 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  + +W H GF+ + G+KMSKS G FI     L         +    +R      
Sbjct: 310 GAGYRTPSAVWAH-GFVTVNGQKMSKSKGTFIKARTYLN-------HFRPEFLRYY---- 357

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------GIIDPAVLSALYNDLNT 361
            Y   +     R+ + ++ L  + Q   S              G I     S L + +  
Sbjct: 358 -YAAKL---SNRIDDFDLNLEDFVQRVNSDLVGKLVNIASRCAGFITKQFDSNLSDSIIE 413

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
              I+   + + E  ++++      A  HI+ +
Sbjct: 414 PELIKQFTEASDELAQHYENRDFGRAVKHIMAL 446


>gi|167561854|ref|ZP_02354770.1| isoleucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 945

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 52/149 (34%), Gaps = 28/149 (18%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
           L        +   T          +L+ L +              A+++    + L I  
Sbjct: 665 LKRVTEGYRRIRNTLR-------FLLANLSD-----------FDYAKDALPASEWLEIDR 706

Query: 387 ---ASAHILGIEVCKEHLNKNISIAIEKL 412
              A A  L  E+   +        + KL
Sbjct: 707 YAVAFAAQLQTELLAHYEKYEFHPVVAKL 735


>gi|319939619|ref|ZP_08013978.1| isoleucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811208|gb|EFW07514.1| isoleucyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 930

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 69/178 (38%), Gaps = 19/178 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +P   +  Y+DL +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPKEDTVAYDDLRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL--VQERL 417
           +      K  RE+  + + L I+ A  + + +++   +L+    +  IE    ++ R 
Sbjct: 683 VRFNQLVKTIREAYADFEFLDIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQ 740


>gi|312864262|ref|ZP_07724496.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|311100263|gb|EFQ58472.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 62/170 (36%), Gaps = 23/170 (13%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGK 229
           E  +G   PE            WK+   +   W S   W     GW    +     Y   
Sbjct: 424 EMYVGEEAPEGDG---------WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPT 474

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
              +   G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   
Sbjct: 475 STLV--TGYDIIFFWVSRMIFQSLEFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPM 532

Query: 290 ELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
           +++E        + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 533 DVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|297847354|ref|XP_002891558.1| hypothetical protein ARALYDRAFT_314419 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337400|gb|EFH67817.1| hypothetical protein ARALYDRAFT_314419 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1061

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 33/195 (16%), Positives = 53/195 (27%), Gaps = 49/195 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                  NG + L   KMSKS GNF T  
Sbjct: 648 PLDLRVSGKDLIQNHLTFFIYNHTALMESRNWPRGIRCNGHIMLNSEKMSKSTGNFRTQR 707

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +E        + A   R ++                                 G+ D 
Sbjct: 708 QAIE-------EFSATATRFSL----------------------------ADAGDGVDDA 732

Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
             +        T +A  A+ +L  +     D+L   ++      +         +     
Sbjct: 733 NFV------FETANA--AILRLMTQFKWMEDVLAAESS------LRTGPPSTYADKVFEN 778

Query: 410 EKLVQERLILLKMKK 424
           +  +  RL     K 
Sbjct: 779 DMKIAIRLTEKAYKD 793


>gi|209489472|gb|ACI49231.1| hypothetical protein Csp3_JD05.016 [Caenorhabditis sp. PS1010]
          Length = 1841

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 41/115 (35%), Gaps = 27/115 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L +YY  E     +    D +      A++           
Sbjct: 201 GYLHIGHAKAAL-------LNQYYQQEFDGQLIMRFDDTNP-----AKEN---------- 238

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
               +   Q   +D   L  + P     +++H   ++ + + ++  G AY  + +
Sbjct: 239 ----AHFEQVIKEDLKLLNII-PDRWTHSSDHFELLLEMCEKLLKEGKAYVDDTD 288


>gi|189083246|sp|A8FGG0|SYL_BACP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 804

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 557 KEPFMKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W   +   G I   V  
Sbjct: 610 DASIAWSETGLDGARRFLDRVWRLFTNEDGTISDKVTE 647


>gi|192291492|ref|YP_001992097.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
 gi|192285241|gb|ACF01622.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
          Length = 514

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     K V ++    +   K+I+ A++E        
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGLKMIQTAQKEGL------ 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               + ++N  +F +   RL         R +   H   +  + + +   G  Y  +   
Sbjct: 68  TPHALATRNAGRFREMDDRLGVSY-DRFIRTSEEQHHRSVQEVWKRMQDKGDIYLDSYSG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAYY 136


>gi|39935844|ref|NP_948120.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
 gi|39649698|emb|CAE28219.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
          Length = 514

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     K V ++    +   K+I+ A++E        
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGLKMIQTAQKEGL------ 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               + ++N  +F +   RL         R +   H   +  + + +   G  Y  +   
Sbjct: 68  TPHALATRNAGRFREMDDRLGVSY-DRFIRTSEEQHHRSVQEVWKRMQDKGDIYLDSYSG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAYY 136


>gi|88859987|ref|ZP_01134626.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
 gi|88817981|gb|EAR27797.1| methionyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
          Length = 673

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    AD  + T N++ H GF+ + G KMSKS G FI     L+
Sbjct: 288 HFIGKDIIYFHSLFWPAMLEGADFRKPT-NVFAH-GFVTVNGAKMSKSKGTFIKARTYLD 345

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 346 -------HLNPEYLRYYF 356


>gi|328945290|gb|EGG39443.1| leucine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 837

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 613 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 665

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 666 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 721

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 722 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 781

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 782 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 811


>gi|306824631|ref|ZP_07457976.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304433199|gb|EFM36170.1| valine--tRNA ligase [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 882

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|302135143|ref|ZP_07261133.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB 1108]
          Length = 868

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 39/140 (27%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R          V      D   
Sbjct: 29  QPGKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG-----KSVLQPLGWD--- 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|237650162|ref|ZP_04524414.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237821761|ref|ZP_04597606.1| valyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|224372735|ref|YP_002607107.1| isoleucyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|254782422|sp|B9L8Z9|SYI_NAUPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|223589145|gb|ACM92881.1| isoleucyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 911

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN +   E+        + +   ++RL +  + Y   I  +   
Sbjct: 595 HGFTVDEKGEKMSKSKGNVVAPQEV-------SKKFGTEILRLWVATSDYSGDIKISDGI 647

Query: 327 LTEAEILLSKWPQT 340
           L +      K   T
Sbjct: 648 LKQVAEQYRKIRNT 661


>gi|149002240|ref|ZP_01827182.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759555|gb|EDK66546.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|83286182|ref|XP_730049.1| leucyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
 gi|23489582|gb|EAA21614.1| probable leucyl-tRNA synthetase-related [Plasmodium yoelii yoelii]
          Length = 1278

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 33/107 (30%), Gaps = 37/107 (34%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQS--------------------------------- 252
            FDI   G DLIF H      N +A                                   
Sbjct: 797 PFDIRISGKDLIFNHLTMSLFNHVAIWGNKIYKKNKDCSEEKSALDKQTEILNEIEKLDL 856

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
              + I+     +  NG + +   KMSKS GNFITI   +      G
Sbjct: 857 NEYETIKYFPKSFFCNGHVLINKEKMSKSKGNFITIENSINQYTSDG 903


>gi|332359353|gb|EGJ37174.1| leucine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 858

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 634 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 686

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 687 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 742

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 743 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 802

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 803 QIKGKVRA-KLVVTKDLSREELQE--IALSDEK 832


>gi|331247159|ref|XP_003336209.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
 gi|309315199|gb|EFP91790.1| methionyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
           75-36-700-3]
          Length = 188

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 32/93 (34%), Gaps = 8/93 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+   M++ DVL R  +        +++   TD     ++RA + +       
Sbjct: 87  VNSVPHIGHLHSMVIADVLGRYNQLKT--DTPSFMLTGTDEHGSKVQRAAENN-----RQ 139

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +   +    + +F +              R T 
Sbjct: 140 SPQELCEAVSDRFRQLARAANVKYDDF-IRTTE 171


>gi|153814976|ref|ZP_01967644.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|317501588|ref|ZP_07959782.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331088546|ref|ZP_08337459.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145847544|gb|EDK24462.1| hypothetical protein RUMTOR_01191 [Ruminococcus torques ATCC 27756]
 gi|316897005|gb|EFV19082.1| valine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330407808|gb|EGG87302.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 68/167 (40%), Gaps = 16/167 (9%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              + IH    + +GRKMSKS GN I   E+
Sbjct: 480 DVLVTGYDIIFFWVIRMVFSGYEHTGKSPFHTVLIHGLVRDSQGRKMSKSLGNGIDPLEI 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +RL ++  +   P   + F  +R+  +    +K W  +      +
Sbjct: 540 ID-------KYGADALRLTLVTGN--APGNDMRFYNERVEASRNFANKVWNASRFIMMNM 590

Query: 348 DPAVLSALYNDLNTVS---AIQALHKLARESTKNHDLLPIFNASAHI 391
           D  ++    +DL T +    + A + LA++ T N D   +  A   +
Sbjct: 591 DENIIDEPSHDLFTPADRWILSAANTLAKDVTDNMDKFELGIAVQKV 637


>gi|120553794|ref|YP_958145.1| isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|166229746|sp|A1TYY9|SYI_MARAV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120323643|gb|ABM17958.1| Isoleucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 939

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + +     +  H   ++ +G KMSKS GN I   E++           A ++RL +
Sbjct: 580 SIAMNGVAPYKQVLTHGFTVDAKGYKMSKSLGNVIAPQEVMNELG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  +   L +      +   T+ 
Sbjct: 633 SATDYSGEMSVSKDILRQTADGYRRIRNTAR 663


>gi|332967918|gb|EGK07008.1| isoleucine--tRNA ligase [Kingella kingae ATCC 23330]
          Length = 927

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 15/108 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++  GRKMSKS GN +   E+          + A ++RL   
Sbjct: 579 CATLGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWTA 631

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            T Y   +  + + L        +   T +         L A   D N
Sbjct: 632 ATDYSGELAISKEILKRVTESYRRIRNTLS--------FLFANLKDFN 671


>gi|320165702|gb|EFW42601.1| isoleucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 1078

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 31/95 (32%), Gaps = 6/95 (6%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA------P 305
           S  A  +     I  H   L+  GRKMSKS GN +    +      G +           
Sbjct: 701 SVIARGVAPFKTIVTHGFLLDERGRKMSKSLGNVVEPARITHGGSAGAKGGEPWTAAGTD 760

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           V+R       Y   +  +   +     ++ K   T
Sbjct: 761 VLRAWAASADYSADVVISKDAIKAQTQIVKKIRNT 795


>gi|307730763|ref|YP_003907987.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307585298|gb|ADN58696.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 945

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTESYRRIRNT 678


>gi|304315621|ref|YP_003850766.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302777123|gb|ADL67682.1| methionyl-tRNA synthetase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 636

 Score = 42.9 bits (100), Expect = 0.11,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 61/180 (33%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A     D           +G+L L+G KMSKS GN +   EL
Sbjct: 253 DVHLVGKEIVRFHTIIWPAMLMALDL--PLPKKVFGHGWLILDGGKMSKSKGNVVDPKEL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK----- 336
           +         +    IR  +L    +     F+ + L          +   LLS+     
Sbjct: 311 VS-------KYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSRTVTMV 363

Query: 337 -------WPQTSTSKGIIDPAVLSALY---------NDLNTVSAIQALHKLARESTKNHD 380
                   P+ S    + D  +  A           + L   +A+  + KL   + K  D
Sbjct: 364 EKYFDGVVPEASDKDNVDDELISIANDLPKIVEGYMDRLQFSNALAEIWKLVGRANKYID 423


>gi|332362845|gb|EGJ40638.1| valine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 881

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|323359386|ref|YP_004225782.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323275757|dbj|BAJ75902.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 524

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 14/124 (11%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+    +  D L R  R    +   T++   TD   + + RA   + + P     
Sbjct: 18  DVPHIGHGYTTVAVDTLARWHRQAGDD---TWMLTGTDEHGQKMMRAAAANGATPQEWVD 74

Query: 97  SIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
            ++              L           QPR   H  ++   +Q +   G+ Y    E 
Sbjct: 75  KLVGESW----FPLLKTLDVANDDFIRTSQPR---HEERVAKFVQALYDRGYIYAGEFEA 127

Query: 153 IFDT 156
           ++  
Sbjct: 128 LYCV 131


>gi|312795297|ref|YP_004028219.1| isoleucyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167072|emb|CBW74075.1| Isoleucyl-tRNA synthetase (EC 6.1.1.5) [Burkholderia rhizoxinica
           HKI 454]
          Length = 945

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN I   E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGQGRKMSKSVGNVIAPQEV-------SNKLGAEIIRLWVASTDYSGELSISDEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVVESYRRIRNT 678


>gi|212639638|ref|YP_002316158.1| isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
 gi|212561118|gb|ACJ34173.1| Isoleucyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
          Length = 918

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++E          A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFVLDGEGRKMSKSLGNVVVPAKVMEQLG-------ADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 ASVDYQADVRISDNILKQVAEVYRKIRNT 650


>gi|182624277|ref|ZP_02952062.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|177910495|gb|EDT72868.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 514

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     +  D+L R  R    E  V +V         ++ +A++      IN +   +
Sbjct: 17  HIGRVSSWMAGDILARYHRAKGDE--VIFVSGSDCHGSPVLNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R T+   H  Q+  +I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFDIFTR-TDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYC 125


>gi|168482808|ref|ZP_02707760.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043865|gb|EDT51911.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332203734|gb|EGJ17801.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|148558505|ref|YP_001257249.1| isoleucyl-tRNA synthetase [Brucella ovis ATCC 25840]
 gi|148369790|gb|ABQ62662.1| isoleucyl-tRNA synthetase [Brucella ovis ATCC 25840]
          Length = 972

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRSRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    + A  +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENAAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|148244174|ref|YP_001218868.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
 gi|166231651|sp|A5CY09|SYL_VESOH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146326001|dbj|BAF61144.1| leucyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
          Length = 815

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 36/85 (42%), Gaps = 9/85 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +   G KMSKS GN +   +++       + + A  +RL +L      
Sbjct: 554 EPFKNL-LTQGMVLKNGVKMSKSKGNTVDPTKMI-------KKYGADTVRLFILFAAPPM 605

Query: 318 EPIDFTVQRLTEAEILLSKWPQTST 342
           + +++    L  A   + K  +  +
Sbjct: 606 QDLEWNNSGLEGAHRFIKKVYRLVS 630


>gi|145298097|ref|YP_001140938.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|166230606|sp|A4SJW8|SYL_AERS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|142850869|gb|ABO89190.1| leucyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 858

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 48/143 (33%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           IH+G       KMSKS  N I    ++E        + A  +RL M+      P    ++
Sbjct: 612 IHSGM-----TKMSKSKNNGIDPQLMVER-------YGADTVRLFMMFA---SPAEMTLE 656

Query: 322 FTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSAL------------------YND-- 358
           ++   +  A+  L +  + +    S G +    ++AL                   +D  
Sbjct: 657 WSDSGVEGAQRFLRRLWRLTFEHVSAGAVPALDVAALTSEQKAVRRELHKTIAKVSDDVG 716

Query: 359 ----LNTVSAIQALHKLARESTK 377
                NT  AI A+ +L     K
Sbjct: 717 RRQTFNT--AIAAIMELMNNLAK 737


>gi|113461693|ref|YP_719762.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT]
 gi|122945429|sp|Q0I5C5|SYL_HAES1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|112823736|gb|ABI25825.1| leucyl-tRNA synthetase [Haemophilus somnus 129PT]
          Length = 860

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 43/154 (27%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKW------PQTSTSKGIIDPAVLS----AL-----------YND---- 358
              +  A   L +          + ++  +DP  LS    AL            +D    
Sbjct: 660 ESGVEGANRFLRRLWNLVFEYNQNPAQTALDPTALSVEQKALRRDVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
              NT  AI A+ +L  + TK         A   
Sbjct: 720 QTFNT--AIAAIMELMNKLTKASLSNEQDRAVMA 751


>gi|17547177|ref|NP_520579.1| isoleucyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|17429479|emb|CAD16165.1| probable isoleucyl-trna synthetase protein [Ralstonia solanacearum
           GMI1000]
          Length = 960

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN I   E+            A +IRL +  T 
Sbjct: 613 YGKPPYKALLTHGFTVDGEGRKMSKSIGNTIAPQEI-------ANKMGAEIIRLWVASTD 665

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 666 YSGELAISDEILKRVVEGYRRIRNT 690


>gi|170718612|ref|YP_001783813.1| leucyl-tRNA synthetase [Haemophilus somnus 2336]
 gi|189030281|sp|B0URM9|SYL_HAES2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168826741|gb|ACA32112.1| leucyl-tRNA synthetase [Haemophilus somnus 2336]
          Length = 860

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 43/154 (27%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKW------PQTSTSKGIIDPAVLS----AL-----------YND---- 358
              +  A   L +          + ++  +DP  LS    AL            +D    
Sbjct: 660 ESGVEGANRFLRRLWNLVFEYNQNPAQTALDPTALSVEQKALRREVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
              NT  AI A+ +L  + TK         A   
Sbjct: 720 QTFNT--AIAAIMELMNKLTKASLSNEQDRAVMA 751


>gi|229169755|ref|ZP_04297455.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228613794|gb|EEK70919.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 544

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           Q+   +        I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QDGVMV------KEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|257053042|ref|YP_003130875.1| lysyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256691805|gb|ACV12142.1| lysyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 546

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 31/88 (35%), Gaps = 8/88 (9%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +   +  L+G  +S S GN +T  E+LE  +         V+R        R+  DF++ 
Sbjct: 297 MVYEWFTLDGEALSSSAGNVVTAAEVLELVE-------PAVLRYFFCKDP-RKQRDFSIA 348

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            L +      +       +   D     
Sbjct: 349 HLDQLVDEFDRLEAVYFGRQDADEEDRE 376


>gi|157879483|pdb|1OBC|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Post-Transfer Editing Substrate Analogue
          Length = 814

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/175 (15%), Positives = 47/175 (26%), Gaps = 16/175 (9%)

Query: 23  PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
           P    + V  P      H+G+ +   + DVL R  R    E  V +              
Sbjct: 29  PGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYE--VLHPMGWDAFGLPAENA 86

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----N 138
           A      +         T  N +Q  +    +  L        T   P+     Q     
Sbjct: 87  A------LKFGVHPKDWTYANIRQAKESLRLMGILY-DWDREVTTCEPEYYRWNQWIFLK 139

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
           +   G AY A   ++            +  ++ E +          K+    + L
Sbjct: 140 MWEKGLAYRAKG-LVNWCPKCQT--VLANEQVVEGRCWRHEDTPVEKRELEQWYL 191


>gi|148998241|ref|ZP_01825710.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168576529|ref|ZP_02722403.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307067188|ref|YP_003876154.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|147755884|gb|EDK62928.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183577726|gb|EDT98254.1| valyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306408725|gb|ADM84152.1| Valyl-tRNA synthetase [Streptococcus pneumoniae AP200]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|94311817|ref|YP_585027.1| isoleucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987847|sp|Q1LJB8|SYI_RALME RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|93355669|gb|ABF09758.1| isoleucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 959

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 32/85 (37%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN ++  ++            A +IRL +  T 
Sbjct: 612 YGKPPYKALLTHGFTVDGEGRKMSKSVGNTVSPQDI-------SNKMGAEIIRLWVASTD 664

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 665 YSGELSISDEILKRVVEGYRRIRNT 689


>gi|322385938|ref|ZP_08059579.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270053|gb|EFX52972.1| valine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|319947518|ref|ZP_08021750.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746458|gb|EFV98719.1| valine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|311031241|ref|ZP_07709331.1| leucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 805

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 52/278 (18%), Positives = 85/278 (30%), Gaps = 64/278 (23%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L +   KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGVNNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  + ++E+         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDHIVESHG-------ADTLRLYEMFMGPLEASIAWSTNGLDGSRRFLDRVWRLFV 635

Query: 342 TSKGIIDPAVLSALYND---------------------LNTVSAIQA----LHKLAREST 376
              G +   V      D                      NT  AI      +++  +  T
Sbjct: 636 EENGKLSSKVAEVTEEDTLEKTYHATVKKVTEDYEGLRFNT--AISQMMVFINEAYKADT 693

Query: 377 KNHDLLPIFNASA-----HI-------LGIE-------VCKEHLNKNISIAIEKLVQERL 417
              D +  F         HI       LG E             +K +   +E +VQ   
Sbjct: 694 IAKDYVEGFVKMLSPVCPHIAEELWEKLGNEGTITYAAWPTFDESKLVEDEVEIVVQVNG 753

Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
            L K K +  +D  R+++E     L D    ++ +  T
Sbjct: 754 KL-KAKLYVPSDATREKMEE--IALADDAVKESIEGKT 788


>gi|251772727|gb|EES53289.1| isoleucyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
          Length = 948

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 64/183 (34%), Gaps = 32/183 (17%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +   +      ++  H   ++ +GRKM+K+ GN I+  E+ +        + A V+RL  
Sbjct: 589 AMALEGTPPYRSVLTHGFVVDGQGRKMAKTLGNVISPKEITD-------KYGADVLRLWA 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS------ 363
               Y+E    + + +        K   T          +LS LY+  D           
Sbjct: 642 ASADYQEDTRLSPEIVNNTVDSYRKIRNTVR-------FILSNLYDFADSEKPKTVSADP 694

Query: 364 ----AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
               A+    ++ RE    +D        AH+  I       +  +S     ++++RL  
Sbjct: 695 LDGWALSQWEEVKREILAAYD----EKRFAHV--ISQLNNFCSVTLSAQYFDIIKDRLYA 748

Query: 420 LKM 422
              
Sbjct: 749 EAA 751


>gi|213966842|ref|ZP_03394993.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301381973|ref|ZP_07230391.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302058767|ref|ZP_07250308.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|213928692|gb|EEB62236.1| leucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 868

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 39/140 (27%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R          V      D   
Sbjct: 29  QPGKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG-----KSVLQPLGWD--- 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N A +  T +N          L  LA       T   P      Q  
Sbjct: 81  AFGMPAENAAIDNNVAPAKWTYENIAYMKNQLKSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|163802404|ref|ZP_02196297.1| isoleucyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173705|gb|EDP58520.1| isoleucyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 381

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 33/91 (36%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRKMSKS GN +   ++            A ++RL +
Sbjct: 15  SIAMKDEAPYKQVLTHGFVVDGHGRKMSKSVGNVVAPKDVTNKLG-------ADILRLWV 67

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T Y   +  + + L  +     +   T+ 
Sbjct: 68  ASTDYTGEVAVSDEILKRSADAYRRIRNTAR 98


>gi|71277791|ref|YP_267925.1| isoleucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|84029510|sp|Q486U0|SYI_COLP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71143531|gb|AAZ24004.1| isoleucyl-tRNA synthetase [Colwellia psychrerythraea 34H]
          Length = 953

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 32/91 (35%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +G KMSKS GN IT  E+            A ++RL  
Sbjct: 581 SVAMNGAAPYKQVLTHGFVVDAKGHKMSKSLGNVITPKEITNNLG-------ADILRLWT 633

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
              +Y + I    +          +   TS 
Sbjct: 634 ASVNYTQEITAGDEIFKRQADAYRRIRNTSR 664


>gi|56477955|ref|YP_159544.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|81821070|sp|Q5P221|SYI_AZOSE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56313998|emb|CAI08643.1| isoleucyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 939

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +G+KMSKS GN +   E+ +          A ++RL + 
Sbjct: 591 CAIDGRAPYDALLTHGFVVDGQGKKMSKSKGNVVAPQEVSDKLG-------AEILRLWVA 643

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L     +  +   T
Sbjct: 644 ATDYSGELTISKEILDRVVEVYRRLRNT 671


>gi|15923597|ref|NP_371131.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156978936|ref|YP_001441195.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255005401|ref|ZP_05144002.2| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|21542255|sp|Q932F6|SYR_STAAM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|166232846|sp|A7WZ56|SYR_STAA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|14246375|dbj|BAB56769.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156721071|dbj|BAF77488.1| arginyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 553

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/172 (14%), Positives = 48/172 (27%), Gaps = 47/172 (27%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR   V D L  +L          Y  N  D  ++I   AR        
Sbjct: 132 PT--GDLHIGHARNAAVGDALANILTAAGYNVTREYYIN--DAGNQITNLARSIETHFFE 187

Query: 92  -------------------------INDAISIITSKNTQQFVKDTTRLACLA-------- 118
                                    + +    I   + +  +K+  +L            
Sbjct: 188 ALGDNSYSMPEDGYNGKDIIEIGKDLAEKHPEIKDYSEEARLKEFRKLGVEYEMAKLKND 247

Query: 119 --------PTHQPRATNHI-PQMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
                          + +   +++ ++  +   G+ YEA+      T+   +
Sbjct: 248 LAEFNTHFDNWFSETSLYEKGEILEVLAKMKELGYTYEADGATWLRTTDFKD 299


>gi|322388625|ref|ZP_08062225.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140545|gb|EFX36050.1| valine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|320536840|ref|ZP_08036835.1| lysyl-tRNA synthetase [Treponema phagedenis F0421]
 gi|320146299|gb|EFW37920.1| lysyl-tRNA synthetase [Treponema phagedenis F0421]
          Length = 528

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
          Y C  G T     HIGN R +I  D++ R LR         Y  +  D+
Sbjct: 28 YTCASGITPSGTVHIGNFREIISVDLVVRALRDRGKNVRFIYSWDDYDV 76


>gi|309799540|ref|ZP_07693769.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
 gi|308116816|gb|EFO54263.1| valyl-tRNA synthetase [Streptococcus infantis SK1302]
          Length = 883

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|307728927|ref|YP_003906151.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
 gi|307583462|gb|ADN56860.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
          Length = 719

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    +E
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSFIE 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387



 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 8/84 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         ++ RA  E            
Sbjct: 32  IHIGHLVEYIQTDIWVRALRMHGHE--VYYVGADDTHGTPVMLRAEMEGL------TPKQ 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +  Q+  +D          + 
Sbjct: 84  LIDRVWQEHKRDFDSFGISFDNYY 107


>gi|227510169|ref|ZP_03940218.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
 gi|227190374|gb|EEI70441.1| valyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis ATCC
           27305]
          Length = 893

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      I QS          ++ +H    + +GRKMSKS GN I   ++
Sbjct: 491 DTLVTGYDIIFFWVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDV 550

Query: 292 LETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  + +     + + F+  ++  A   ++K    S 
Sbjct: 551 ID-------KYGADALRWFLSVGGTPGQDLKFSYDKMDSAWNFINKIWNASR 595


>gi|227524312|ref|ZP_03954361.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
 gi|227088543|gb|EEI23855.1| valyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
          Length = 893

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      I QS          ++ +H    + +GRKMSKS GN I   ++
Sbjct: 491 DTLVTGYDIIFFWVSRMIFQSLEFTHRRPFKDVLLHGLIRDSQGRKMSKSLGNGIDPMDV 550

Query: 292 LETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++        + A  +R  + +     + + F+  ++  A   ++K    S 
Sbjct: 551 ID-------KYGADALRWFLSVGGTPGQDLKFSYDKMDSAWNFINKIWNASR 595


>gi|149726232|ref|XP_001503963.1| PREDICTED: leucyl-tRNA synthetase [Equus caballus]
          Length = 1176

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 53/163 (32%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A           A     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPAAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 722 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 751

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 752 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 784


>gi|146308801|ref|YP_001189266.1| leucyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|145577002|gb|ABP86534.1| leucyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 906

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 39/148 (26%), Gaps = 15/148 (10%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           + +   +  P     Y      Y     H+G+ R   + DV+ R  R     K V     
Sbjct: 57  QKSFVVSEQPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--KNVLQPMG 114

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
                      A +         A +  T +N          L  LA       T   P 
Sbjct: 115 WDAFGMPAENAAMKNQV------APAKWTYENIAYMKSQLKSLG-LAIDWTREVTTCKPD 167

Query: 132 MIYLIQ----NIILHGHAYEANNEIIFD 155
                Q     +   G  Y  N  + +D
Sbjct: 168 YYRWEQWLFTRLFEKGVIYRKNGTVNWD 195


>gi|15644113|ref|NP_229162.1| isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
 gi|6226709|sp|P46213|SYI_THEMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4981921|gb|AAD36431.1|AE001790_3 isoleucyl-tRNA synthetase [Thermotoga maritima MSB8]
          Length = 919

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 63/157 (40%), Gaps = 13/157 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D++  G D       + I  +           +  H    + +GRKMSKS GN +   
Sbjct: 547 PLDMYLEGSDQHRGWFHSSIFLAVAKRGSAPYKEVLTHGFIKDEQGRKMSKSLGNVVDPM 606

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKG 345
           E++E        + A ++RL +  + Y   I  +++ + +   +  K   T      +  
Sbjct: 607 EVVE-------KYGAEILRLWLASSDYFNDIKISMRIVEQQTEVYRKIRNTFRFLLGNLE 659

Query: 346 IIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
             DP +    +  L T+   A+  L ++ + +T+ +D
Sbjct: 660 DFDPELDRVPHEKLLTIDRWALGRLQEIIKRATEYYD 696


>gi|87303680|ref|ZP_01086455.1| methionine--tRNA ligase [Synechococcus sp. WH 5701]
 gi|87281785|gb|EAQ73750.1| methionine--tRNA ligase [Synechococcus sp. WH 5701]
          Length = 529

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 59/337 (17%), Positives = 97/337 (28%), Gaps = 82/337 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  D L R  R          V  IT  D+  ++    +  +     
Sbjct: 12  VNDKPHLGSAYTTLACDALARFQRLMG-----RQVVFITGCDEHGLK---IQRTAEAAGL 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI-- 152
                  + + Q+     R          R +   P+   L++         EA  ++  
Sbjct: 64  TPQAHCDQVSDQYRDLWQRWQISY-DRFIRTSE--PRHRLLVEQFYRRV---EAAGDVVE 117

Query: 153 -------IFDTSSIPN-------------------------YGSFSR--RKIDEQKMGTR 178
                          +                         +   SR  + I+E      
Sbjct: 118 GRQRGWYCVACEEFKDDPPEARAPQCSTHQRPLEWRDELNLFFRLSRYQQAIEELIQRPG 177

Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG--------WHIECSAMSSHYL-- 227
            +     ++   +F+            + PWG   PG        W        +  L  
Sbjct: 178 FIAPASRRREVENFVAQGLHDFSISRLDLPWGIPVPGHEGHTFYVWFDALLGYLTALLEP 237

Query: 228 GKVFD------------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           G   D            IH  G D++  H     A    A  ++    ++ H GFL  EG
Sbjct: 238 GDPPDLALLSQRGWPASIHVIGKDILRFHAVYWPAMLLSA-GLDLPERVFGH-GFLTREG 295

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           +KM KS GN +   ELLE             +R  +L
Sbjct: 296 QKMGKSLGNVLDPGELLERCG-------PDAVRWYLL 325


>gi|150389212|ref|YP_001319261.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
 gi|149949074|gb|ABR47602.1| valyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
          Length = 884

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 57/137 (41%), Gaps = 25/137 (18%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              +++IH    + +GRKMSKS GN I    +++        + A  +R  ++  +   P
Sbjct: 509 PFKHVFIHGLVRDADGRKMSKSLGNGIDPLNIID-------QYGADALRFTLVTGN--SP 559

Query: 320 ---IDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSALYNDLNTVS--AIQA 367
              + F +++L  +    +K    +         K I +  V       LNT     I  
Sbjct: 560 GNDMRFHMEKLESSRNFANKLWNATRFVLMNLDEKEITEEEVKEH----LNTADRWIISR 615

Query: 368 LHKLARESTKNHDLLPI 384
           ++++ +E T+N D   +
Sbjct: 616 VNQVTKEVTENMDKFEL 632


>gi|327439439|dbj|BAK15804.1| valyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 880

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 59/164 (35%), Gaps = 16/164 (9%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ P D   W +   +   W S   W      W  E S M   Y      +   G D+I
Sbjct: 431 GKEAPEDAENWTQDEDVLDTWFSSALWPFSTMDWPNEESEMFKRYYPTNTLV--TGYDII 488

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + EGRKMSKS GN +   ++++        
Sbjct: 489 FFWVSRMIFQGKEFTGERPFKDVLIHGLVRDAEGRKMSKSLGNGVDPMDVID-------Q 541

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           + A  +R  +       P   + ++ +++      ++K    S 
Sbjct: 542 YGADSLRYFLATGS--SPGQDLRYSTEKVESTWNFVNKIWNASR 583


>gi|322372695|ref|ZP_08047231.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
 gi|321277737|gb|EFX54806.1| isoleucine--tRNA ligase [Streptococcus sp. C150]
          Length = 932

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQ---- 366
                   +  ++  L++      K   T           L A  +D N T  A+     
Sbjct: 623 TSVDTTNDVRISMDILSQVSESYRKIRNTLR--------FLIANTSDFNPTTDAVAFEEL 674

Query: 367 ------------ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                        L K  R++  N + L I+ A  + + +E+   +L+
Sbjct: 675 RSVDQYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVELSAFYLD 722


>gi|229541183|ref|ZP_04430243.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229325603|gb|EEN91278.1| isoleucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 922

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 13/135 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ EGRKMSKS GN I   +++E          A +IRL +
Sbjct: 568 SVAVTGRAPYDGVLSHGFVLDGEGRKMSKSLGNTILPGKVVEQLG-------ADIIRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AI 365
               Y+  +  + + L +   +  K   T      +    DPA     Y +L  V    +
Sbjct: 621 ASVDYQADVRVSNEILKQVSEVYRKIRNTFRFMLGNLNDFDPARHQVAYEELREVDRFML 680

Query: 366 QALHKLARESTKNHD 380
             L+KL +E  + ++
Sbjct: 681 VKLNKLVKEVREAYE 695


>gi|303276647|ref|XP_003057617.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545]
 gi|226460274|gb|EEH57568.1| methionyl-tRNA synthetase [Micromonas pusilla CCMP1545]
          Length = 632

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 36/120 (30%), Gaps = 14/120 (11%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              H+G+A   I  D + R  R     + V Y     +   KI E A             
Sbjct: 19  GAPHMGHAYEAISTDCIARYHRA--YGRDVLYQTGSDEHGQKIAEAAET------AGCEP 70

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
             +  K    F +D      +A     R T+  P+       +         N +I  DT
Sbjct: 71  IELCDKYVAAF-QDLNAKTSVANDVYNRTTS--PEHHEACGELFRRS---RDNGDIYLDT 124



 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 9/70 (12%)

Query: 260 KTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YR 317
                   +GF+   +G+KMSKS GN +   E L         +P+   R  ++    Y 
Sbjct: 286 PLPKTVFGHGFVTASDGQKMSKSIGNVVDPLEQLA-------KYPSDSFRYYLMRNGVYG 338

Query: 318 EPIDFTVQRL 327
             I F+   L
Sbjct: 339 SDIPFSEANL 348


>gi|224436874|ref|ZP_03657863.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313143352|ref|ZP_07805545.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
 gi|313128383|gb|EFR46000.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
          Length = 534

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 15/88 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-------------ITDIDDKI 79
           PT     HIG+AR  +  DVL R+ R+   E    Y  N             +    + I
Sbjct: 115 PT--GPLHIGHARGAVYGDVLSRVGRHLGYEITTEYYINDAGSQIQMLGLSLLLAGQEHI 172

Query: 80  IERARQEHPSIPINDAISIITSKNTQQF 107
           ++R  +   S    + I  +  +  + F
Sbjct: 173 LKREVKYPESYYRGEYIVDLAKECEKHF 200


>gi|170747932|ref|YP_001754192.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
 gi|170654454|gb|ACB23509.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
          Length = 525

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 60/338 (17%), Positives = 100/338 (29%), Gaps = 83/338 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   +     T  D+  ++    +  +     
Sbjct: 22  PNGAPHIGHAYEVIAADAIARFHRLDGYDVLFS-----TGTDEHGLK---IQQAATRAGT 73

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                      +F     R+ C A     R T   H      + + +  +G  Y      
Sbjct: 74  TPRAFVDGTAARFQAMADRMDC-AYDRFIRTTEPDHYAAAQEIWRRMEANGDIYLDKYAG 132

Query: 153 IFDTSSIPNYGSFSRRKIDEQK---MGTRVPEKYHKKNPADF-------ILWKRSTPMEP 202
            +       Y     R +++     + T  P ++ ++    F        L K      P
Sbjct: 133 WYSVRDEAYYDEAETRLLEDGSRRSLATDTPVEWMEEENFLFRLSAYQDKLLKLYDEQ-P 191

Query: 203 GWESP--------------------------WGRGRPG--------WHIECSAMSSHYLG 228
           G+  P                          WG   PG        W        ++YL 
Sbjct: 192 GFIGPDTRRNEVASFVRSGLKDLSVSRTNFDWGVPVPGHPNHVMYVW----VDALTNYLT 247

Query: 229 KV--------------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
                            D+H  G D++  H     A    A  +     ++ H GFL  +
Sbjct: 248 VTGFPDASDPRKEFWPMDLHVIGKDIVRFHAVYWPAFLMSA-GLPLPKRVFGH-GFLLSK 305

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           G KMSKS GN +   EL +T       +    +R  +L
Sbjct: 306 GEKMSKSLGNVLDPFELADT-------YGVDPVRYFVL 336


>gi|158321063|ref|YP_001513570.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141262|gb|ABW19574.1| valyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 884

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 34/182 (18%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              ++++H    + EGRKMSKS GN I   E+++        + A  +R  ++  +   P
Sbjct: 509 PFKHVFLHGLVRDAEGRKMSKSLGNGIDPLEIID-------QYGADALRFTLVTGN--SP 559

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA--IQALHKL 371
              + F +++L  +    +K    +        +D    S++ ++        I  ++K+
Sbjct: 560 GNDMRFHMEKLESSRNFANKLWNATRFVLMNLEVDHIEKSSVESNFTIADKWIISRMNKV 619

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEH---LNKNISIAIEKLVQERL-----ILLKMK 423
           A+E T+N D           LGI V K +    ++     IE LV+ RL        +  
Sbjct: 620 AKEMTENMDKFE--------LGIAVQKLYDFIWSEYCDWYIE-LVKPRLYGEDTEAKRAA 670

Query: 424 KF 425
           ++
Sbjct: 671 QY 672


>gi|50955324|ref|YP_062612.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|50951806|gb|AAT89507.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 529

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 12/125 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +   T++   TD   + I R    + + P   
Sbjct: 16  VNDVPHIGHAYTEVAADVLARWRRQAGDD---TWLLTGTDEHGQKILRTATANGTTPKEW 72

Query: 95  AISIITSKNTQQFVK-DTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNE 151
           A  ++  +        D             R T+  H   +   +Q +   G  Y    E
Sbjct: 73  ADRLVRDEWLPLLTTVDIAN------DDFIRTTDERHEKNVQKFLQKLYDDGFIYAGEYE 126

Query: 152 IIFDT 156
            ++  
Sbjct: 127 ALYCV 131


>gi|88607461|ref|YP_505630.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598524|gb|ABD43994.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 513

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 67/361 (18%), Positives = 109/361 (30%), Gaps = 93/361 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+    ++ DVL R  R       V +     +   KI E AR+    +    
Sbjct: 15  VNDVPHIGHFYTTLISDVLARFKRLDG--DNVKFTTGTDEHGQKIEETARKRGTPVL--- 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + ++ F +   +          R T   H   ++ L   +   G  Y+ +   
Sbjct: 70  ---QFVDEVSESFRELVHKSGFC-ADDFIRTTESRHKDAVVALWDRLYSRGQIYKGSYAG 125

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRS----TPMEPGWES 206
            +       Y     R + + K  T     + ++    F L  W+ +        P +  
Sbjct: 126 FYSVRDETFYQE---RDLIDGKAPTGAEVTWLEEPGYFFKLSEWQEALLQLYQDNPRFVV 182

Query: 207 P----------------------------WGRGRPG--------WHIECSAM-------- 222
           P                            WG G PG        W    S          
Sbjct: 183 PEGKLSEVISFVKSGLRDLSVSRSKAHLSWGIGVPGDPEHLIYVWVDALSNYLALVGFPN 242

Query: 223 --SSHY----LGK-VFDIHGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLN 272
             +  Y     G+    +H  G D++  H     A    A      +  A+ W  N    
Sbjct: 243 EDAEDYNNFWCGENSHVVHVVGKDILKFHAVYWPALLMAAGLPLPKQVVAHGWWLN---- 298

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI----DFTVQRLT 328
            EG+K+SKS GN I    ++         +    +R  +L      PI     F+ +RL 
Sbjct: 299 -EGQKISKSLGNVICPLTIIN-------EYGLDNVRYFLLSE---TPIGNDASFSAKRLK 347

Query: 329 E 329
           E
Sbjct: 348 E 348


>gi|30962531|dbj|BAC76732.1| methionyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans]
          Length = 500

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 9/121 (7%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   ++ DV +R  R  +      +     +   KI + A               
Sbjct: 2   PHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIGTDEHGSKIFQAALAAKS--TPKQFCDR 59

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           ++SK +  F  D      L+ T+  R T+  H+  + +    I  +G+ Y++     +  
Sbjct: 60  VSSKFSDLFT-DLE----LSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSI 114

Query: 157 S 157
           +
Sbjct: 115 T 115



 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 11/72 (15%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +     ++IH  +L ++  KMSKS GN +  +E +         + A  +R  +L  
Sbjct: 266 AAGLSLPQKVFIHGHWL-IDNVKMSKSLGNVVNPSEAIT-------KFTAEGLRYFLLKH 317

Query: 315 ---HYREPIDFT 323
               Y    ++ 
Sbjct: 318 GNPSYDCSFNWN 329


>gi|330505005|ref|YP_004381874.1| leucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
 gi|328919291|gb|AEB60122.1| leucyl-tRNA synthetase [Pseudomonas mendocina NK-01]
          Length = 870

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 39/148 (26%), Gaps = 15/148 (10%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           + +   +  P     Y      Y     H+G+ R   + DV+ R  R     K V     
Sbjct: 21  QKSFVVSEQPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--KNVLQPMG 78

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
                      A +         A +  T +N          L  LA       T   P 
Sbjct: 79  WDAFGMPAENAAMKNQV------APAKWTYENIAYMKSQLKSLG-LAIDWTREVTTCKPD 131

Query: 132 MIYLIQ----NIILHGHAYEANNEIIFD 155
                Q     +   G  Y  N  + +D
Sbjct: 132 YYRWEQWLFTRLFEKGVIYRKNGTVNWD 159


>gi|330811820|ref|YP_004356282.1| Isoleucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327379928|gb|AEA71278.1| Isoleucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 943

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++ +T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDESGRKMSKSLGNVIAPQKVNDTLG-------ADIMRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   +  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEMAVSEQILQRSADAYRRIRNTAR 666


>gi|296109097|ref|YP_003616046.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295433911|gb|ADG13082.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 552

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  I+ D L R+L +Y  E    Y  N
Sbjct: 120 PNGPLHIGHLRNAIIGDCLKRILEFYGYEVETHYYVN 156


>gi|210135584|ref|YP_002302023.1| isoleucyl-tRNA synthetase [Helicobacter pylori P12]
 gi|254782409|sp|B6JNR5|SYI_HELP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|210133552|gb|ACJ08543.1| isoleucyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 920

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 37/90 (41%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
             C  +       +  H   ++ +G KMSKS GN ++++ LL+          + V+RL 
Sbjct: 584 IGCILNNQAPFKKVITHGFIVDEKGEKMSKSKGNVVSLDNLLKKHG-------SDVVRLW 636

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y+  +  +     + E    K+  T
Sbjct: 637 VAFNDYQNDLRVSQTFFIQTEQHYKKFRNT 666


>gi|189083236|sp|A4XYW8|SYL_PSEMY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 870

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 39/148 (26%), Gaps = 15/148 (10%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           + +   +  P     Y      Y     H+G+ R   + DV+ R  R     K V     
Sbjct: 21  QKSFVVSEQPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--KNVLQPMG 78

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
                      A +         A +  T +N          L  LA       T   P 
Sbjct: 79  WDAFGMPAENAAMKNQV------APAKWTYENIAYMKSQLKSLG-LAIDWTREVTTCKPD 131

Query: 132 MIYLIQ----NIILHGHAYEANNEIIFD 155
                Q     +   G  Y  N  + +D
Sbjct: 132 YYRWEQWLFTRLFEKGVIYRKNGTVNWD 159


>gi|145589920|ref|YP_001156517.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048326|gb|ABP34953.1| Isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 953

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 31/172 (18%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
           D       +  H   ++ +GRKMSKS GN I   ++ +          A +IRL +  T 
Sbjct: 606 DGKPPYKALLTHGFTVDGQGRKMSKSVGNVIAPQQVADKLG-------AEIIRLWVASTD 658

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS------------ 363
           Y   +  + + L        +   T           L A  +D +               
Sbjct: 659 YSGEMTISDEILKRVTESYRRIRNTLR--------FLLANLSDFDHAKHAMPVDQWLEID 710

Query: 364 --AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
             A+   ++L  +   ++       A A +L    C E L       I+  +
Sbjct: 711 RYALALANQLQEDVEAHYKAYEFQPAVARML--SFCSEDLGGFYLDIIKDRL 760


>gi|33596600|ref|NP_884243.1| isoleucyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|81427187|sp|Q7W8Z2|SYI_BORPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33573301|emb|CAE37284.1| isoleucyl-tRNA synthetase [Bordetella parapertussis]
          Length = 953

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGHPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVESYRRIRNT 679


>gi|33601155|ref|NP_888715.1| isoleucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|81431251|sp|Q7WKD5|SYI_BORBR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33575590|emb|CAE32668.1| isoleucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 953

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGHPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVESYRRIRNT 679


>gi|305431908|ref|ZP_07401075.1| isoleucine--tRNA ligase [Campylobacter coli JV20]
 gi|304444992|gb|EFM37638.1| isoleucine--tRNA ligase [Campylobacter coli JV20]
          Length = 918

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 21/168 (12%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSTDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--TVSAIQALHKLA--RESTKNHDLL 382
           L +      K   T           L A  NDL    V     + K    R +       
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLENLEVEEFSFIDKWILTRATRVFKSAK 704

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL--ILLKMKKFSSA 428
             F A     G  V    L+ ++S     + ++RL       K+  SA
Sbjct: 705 ENFLAYEFAKGFNVLLNFLSADLSGIYLDISKDRLYCDAKNSKRRKSA 752


>gi|254785207|ref|YP_003072635.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
 gi|259511519|sp|C5BQX2|SYI_TERTT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|237684439|gb|ACR11703.1| isoleucine--tRNA ligase [Teredinibacter turnerae T7901]
          Length = 934

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 11/112 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +   +       +  H   ++  G+KMSKS GN ++  +++           A V+RL +
Sbjct: 575 AIAINGTAPYKQVLTHGFTVDANGKKMSKSIGNTVSPQKVMNELG-------ADVLRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDL 359
             T +   +  + + L        +   T     ++    DPA+ S  ++D+
Sbjct: 628 AATDFSGDMSVSDEILMRTADSYRRIRNTMRYFMSNLNGFDPAINSVAFDDM 679


>gi|15615108|ref|NP_243411.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|81786425|sp|Q9K9V0|SYI_BACHD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|10175165|dbj|BAB06264.1| isoleucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 921

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ EG+KMSKS GN +  N+++       +   A ++RL +
Sbjct: 568 SVAITGKAPYKGVLSHGFTLDGEGKKMSKSLGNVVIPNDVM-------KQLGADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  + + L +   +  K   T
Sbjct: 621 ASVDYQADVRVSDKILKQVSEVYRKIRNT 649


>gi|57167942|ref|ZP_00367081.1| isoleucyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|57020316|gb|EAL56985.1| isoleucyl-tRNA synthetase [Campylobacter coli RM2228]
          Length = 918

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 21/168 (12%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H    + +G+KMSKS GN I          +  +++   ++RL +L++ Y   +  +   
Sbjct: 600 HGFTTDEKGQKMSKSKGNVIAPE-------YVAKTYGVEILRLWILLSDYSTDLKISDNI 652

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--TVSAIQALHKLA--RESTKNHDLL 382
           L +      K   T           L A  NDL    V     + K    R +       
Sbjct: 653 LKQVGEQYRKIRNTIR--------FLLANTNDLENLEVEEFSFIDKWILTRATRVFKSAK 704

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL--ILLKMKKFSSA 428
             F A     G  V    L+ ++S     + ++RL       K+  SA
Sbjct: 705 ENFLAYEFAKGFNVLLNFLSADLSGIYLDISKDRLYCDAKNSKRRKSA 752


>gi|322434798|ref|YP_004217010.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321162525|gb|ADW68230.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 848

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 37/114 (32%), Gaps = 11/114 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV DVL R  R        T+    TD         + E  ++    
Sbjct: 17  VNARPHIGHAYTTIVADVLARRARAQG---TPTWFLTGTD-----EHGQKIERSALAAGI 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
                T + +  F     R+         R T+  H   +  L  ++   G  Y
Sbjct: 69  PPQTFTDQVSASFRDLWKRMGITN-DQYIRTTDEAHKKGVQKLFADLHAKGQIY 121


>gi|317130005|ref|YP_004096287.1| leucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474953|gb|ADU31556.1| leucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 805

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++++         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDDIIKSHG-------ADTLRLYEMFMGPLDASIAWSTNGLDGARRFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLS 353
           +  G ++ A++ 
Sbjct: 636 SDNGELNHAIVD 647


>gi|262283432|ref|ZP_06061198.1| leucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262260923|gb|EEY79623.1| leucyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 833

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 25/122 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+                AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLMTSKEIVAENSGALDKVYHETVKAVTEQIEELKFNT--AIAQLMIFVNAANKEE 719

Query: 380 DL 381
            L
Sbjct: 720 KL 721


>gi|229085157|ref|ZP_04217404.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228698138|gb|EEL50876.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 1035

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ +G+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGVDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEQGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEILL 334
           S GN +   EL+E        + A  +R A+L     +     F+ + + EA+  L
Sbjct: 594 SKGNALDPVELVE-------KFGADALRWALLVDSAPWNAKR-FSERTVQEAKSKL 641


>gi|27352779|dbj|BAC49781.1| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 658

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     K V ++    +   K+I+ A+ E        
Sbjct: 159 PNGNPHIGHAYEAIATDTLARFARLDG--KDVFFLTGTDEHGLKMIQTAQNEGL------ 210

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
             S + ++N  +F     RL   +     R T   H      + + +  +G  Y      
Sbjct: 211 TPSALAARNAARFKAMDERLNV-SFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 269

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 270 WYSVRDEAYY 279


>gi|77412207|ref|ZP_00788527.1| leucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77161748|gb|EAO72739.1| leucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 780

 Score = 42.9 bits (100), Expect = 0.12,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 556 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 608

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I                 AV   +     NT  AI  L      + K  
Sbjct: 609 DRVYRLITTKEITKENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 666

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 667 KLFSDYAKGFVQL-IAPFAPHLGEEL 691


>gi|332654292|ref|ZP_08420036.1| leucine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517378|gb|EGJ46983.1| leucine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 821

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 49/154 (31%), Gaps = 30/154 (19%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L   G KMSKS GN +  N+++E        + A  +R   M +  +
Sbjct: 577 KEPYQKRTSHGMILGEGGEKMSKSRGNVVNPNDVIE-------QYGADTMRTYIMFIGDF 629

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDP-----------------AVLSALYND 358
            +   ++   +   +  L + W   +  +   D                    + A+   
Sbjct: 630 EKAAAWSDNGVKGCKRFLDRVWNLATEQEHTGDEYSQVNEVAVHRAIKKVSEDIEAM--K 687

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
            NT  AI  L  L  +   N        A   +L
Sbjct: 688 FNT--AIATLMALVNDFYANGASRGDMKALLLML 719


>gi|327459125|gb|EGF05473.1| leucine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 861

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 42/217 (19%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++   L  +   L
Sbjct: 637 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEDGLEGSRKFL 689

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     +  L    NT  AI  L      + K
Sbjct: 690 DRVYRLITSKEIVADNNGALDRVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 745

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 746 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVAWPTYDESKLVEAEVEIVV 805

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 806 QIKGKVRAKLVVAKDLS-----REELQE--IALADEK 835


>gi|229147584|ref|ZP_04275929.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|228635874|gb|EEK92359.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADQYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|241203267|ref|YP_002974363.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240857157|gb|ACS54824.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 963

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 612 SAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 664

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA---- 364
           + + Y + +      +        K   T          D     AL +           
Sbjct: 665 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDKGEEIALAD---LPELEQLM 721

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L +L RE+    D   I  A      +E+   + +
Sbjct: 722 LHRLAELDELVRENYDAFDFKKIARALIDFANVELSAFYFD 762


>gi|163857126|ref|YP_001631424.1| isoleucyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|254782369|sp|A9IRC2|SYI_BORPD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|163260854|emb|CAP43156.1| ileS [Bordetella petrii]
          Length = 953

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGQPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVEGYRRIRNT 679


>gi|89073403|ref|ZP_01159927.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
 gi|89050890|gb|EAR56364.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
          Length = 681

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKASTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                 +      +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 348 ------KHLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++           +    + +  +L         I  I    + 
Sbjct: 394 SRNAGFIAKRFDGKLSDNFVEPELYA---EFVAAADRIGELYESREYGRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 451 ANQYVDE 457


>gi|84500590|ref|ZP_00998839.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84391543|gb|EAQ03875.1| leucyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 855

 Score = 42.5 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 37/138 (26%), Gaps = 13/138 (9%)

Query: 23  PSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P   + YV    P      HIG+ R   + DV+ R  R       V +            
Sbjct: 29  PGKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVVARYKRATG--HNVLHPMGFDAFGMPAE 86

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQ 137
             A                T  N    V     L       +  AT    +  Q   L  
Sbjct: 87  NAAMANGGH------PRDWTYSNIDTMVGQMKPLGFSLDWTRMFATCDPEYYGQQQALFL 140

Query: 138 NIILHGHAYEANNEIIFD 155
           + +  G  Y  N  + +D
Sbjct: 141 DFLEKGLVYRKNAVVNWD 158


>gi|327470389|gb|EGF15845.1| valine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 883

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|329116079|ref|ZP_08244796.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326906484|gb|EGE53398.1| leucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 833

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 52/148 (35%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------EFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK II                     + ++    NT  AI  L      + K
Sbjct: 662 DRVYRLITSKEIIAENSGALDKVYHETVKAVTEQIDSM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
             D L +  A   +  I     HL + +
Sbjct: 718 -EDQLFVDYAKGFVQLIAPFAPHLGEEL 744


>gi|322385895|ref|ZP_08059537.1| isoleucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321270074|gb|EFX52992.1| isoleucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 930

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  +V  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISVDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|322392785|ref|ZP_08066243.1| isoleucine--tRNA ligase [Streptococcus peroris ATCC 700780]
 gi|321144363|gb|EFX39766.1| isoleucine--tRNA ligase [Streptococcus peroris ATCC 700780]
          Length = 930

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 70/178 (39%), Gaps = 19/178 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +P   +  Y++L +V     
Sbjct: 623 TSVDSTNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPTEDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL--VQERL 417
           +      K  R++ KN + L I+ A  + + +++   +L+    +  IE    ++ R 
Sbjct: 683 IRFNQLVKTIRDAYKNFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIESAKSLERRQ 740


>gi|315038057|ref|YP_004031625.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276190|gb|ADQ58830.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 927

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N++++          A +IRL +
Sbjct: 569 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMG-------AEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 622 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVSYDDLRSVDQYME 681

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L ++    +D          +   
Sbjct: 682 VKLNDLVKDCLAAYDKFDFTTVFKKVFNF 710



 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 7/101 (6%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQ 85
           GP   +   H+G+A   I  D++ R                   +  ++ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLP-VEQQLAKKGVDRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
                   +       +  Q+ + D  RL  +A    P  T
Sbjct: 114 TMDRAKYRELCRQYAEEQIQKQMTDFKRLGVMADWDHPYIT 154


>gi|260893945|ref|YP_003240042.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260866086|gb|ACX53192.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 512

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H    I  S       +     + +G+L +EG KMSKS GN I  + L
Sbjct: 253 DVHLVGKDIVRFHAI--IWPSILMALGLELPRRVVGHGWLLVEGGKMSKSKGNVIDPHYL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THYR-----EPIDFTVQR-----LTEAEILL 334
           ++        +    +R  +L          Y      + +++ +       L     +L
Sbjct: 311 ID-------KYGVDAVRYYLLRELAFGADGEYEEKNLVKRLNYDLANDLGNLLYRTLTVL 363

Query: 335 SKWPQTSTSK--------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
            K+ +    +               I  PA ++ L + L    A+ A+ +L   + K  D
Sbjct: 364 EKYGEGVIGEPVEKEGPDDELIALAISTPARVAELVDQLQLSEALAAIWQLVGRANKYLD 423



 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 39/122 (31%), Gaps = 11/122 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+A   +  D + R  R    +        +T  D+      + E  +       
Sbjct: 16  DRLHIGHAYTTVAADTVARFKRMEGYDVFF-----LTGADEH---GQKIERTAKSKGKDP 67

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY--LIQNIILHGHAYEANNEIIF 154
                +    F +   RL         R T    +++   + Q +   G  Y++  +  +
Sbjct: 68  QSYVDEIVASFKELWARLEISYDDF-IRTTEPRHKVVAQKIFQKLYEQGDIYKSTYQGWY 126

Query: 155 DT 156
            T
Sbjct: 127 CT 128


>gi|167035836|ref|YP_001671067.1| leucyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189083147|sp|B0KJW8|SYL_PSEPG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166862324|gb|ABZ00732.1| leucyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 868

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 37/143 (25%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
               P     Y      Y     H+G+ R   + DV+ R  R     K V          
Sbjct: 26  VTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N A +  T +N          L  LA       T   P      
Sbjct: 84  MPAENAA------MKNNVAPAKWTYENIDYMKTQLKSLG-LAIDWAREVTTCKPDYYRWE 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     +   G  Y  N  + +D
Sbjct: 137 QWLFTRLFEKGIIYRKNGTVNWD 159



 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++E       ++ A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQSMIE-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +  Q   S+G+     ++ L +    +   +A+H   ++++ +      FN A
Sbjct: 676 RFLRRVWRLAQAHVSQGLPGKLDVATLDDAQKVIR--RAIHAAIKQASTDVGQFHKFNTA 733

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            A ++ +    E   +        L+QE L  
Sbjct: 734 IAQVMTVMNVLEKAPQATEQD-RALLQEGLEA 764


>gi|322412300|gb|EFY03208.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 883

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|300690677|ref|YP_003751672.1| isoleucine--tRNA ligase [Ralstonia solanacearum PSI07]
 gi|299077737|emb|CBJ50375.1| Isoleucine--tRNA ligase [Ralstonia solanacearum PSI07]
          Length = 960

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN I   E+            A +IRL +  T 
Sbjct: 613 YGKPPYKALLTHGFTVDGEGRKMSKSIGNTIAPQEIAGKMG-------AEIIRLWVASTD 665

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 666 YSGELAISDEILKRVVEGYRRIRNT 690


>gi|218779046|ref|YP_002430364.1| leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
 gi|226695253|sp|B8F9F0|SYL_DESAA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|218760430|gb|ACL02896.1| Leucyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
          Length = 863

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 61/155 (39%), Gaps = 26/155 (16%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   ELL         + A  IRL  L        +D++ + +  +   L
Sbjct: 617 EKMSKSKLNVVDPEELLA-------KYGADTIRLFCLFAAPPERDLDWSEEGVEGSYRFL 669

Query: 335 SK-WPQTSTSKGII-DPAVLSALYNDLNTVSAIQAL----HKLARESTKNHDLLPIFN-A 387
            + W   +     + D        +DL+    ++ L    H+  ++ T++ D    FN A
Sbjct: 670 QRVWRMFAAHMDEVKDAQPFEGSPDDLD--GYLKDLYKKTHQTIKKVTEDIDGRFHFNTA 727

Query: 388 SAHIL-------GIE--VCKEHLNKNISIAIEKLV 413
            + ++       G++  +  E     +  A+E ++
Sbjct: 728 ISAVMELVNMVYGLDDNLQGEKRAGVLRAAVEAVI 762


>gi|228961279|ref|ZP_04122898.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228798400|gb|EEM45394.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADQYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|195387722|ref|XP_002052543.1| GJ17599 [Drosophila virilis]
 gi|194149000|gb|EDW64698.1| GJ17599 [Drosophila virilis]
          Length = 1184

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 668 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDETKWPKGMRVNGHLLLNSAKMSKSDGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T++E ++        + A  +RL +
Sbjct: 726 LTLHEAID-------KFSADGMRLCL 744


>gi|239828095|ref|YP_002950719.1| leucyl-tRNA synthetase [Geobacillus sp. WCH70]
 gi|259511545|sp|C5D6D7|SYL_GEOSW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|239808388|gb|ACS25453.1| leucyl-tRNA synthetase [Geobacillus sp. WCH70]
          Length = 805

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 57/137 (41%), Gaps = 13/137 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 557 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDDIIESHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I ++ + L  A   L + W       G ++P ++     D  T+   +  H+  ++ 
Sbjct: 610 EASIAWSTKGLDGARRFLDRVWRLFVDENGNLNPKIVDNPETD--TLE--RVYHQTVKKV 665

Query: 376 TKNHDLLPIFNASAHIL 392
           T++++ L    A + ++
Sbjct: 666 TEDYEALRFNTAISQLM 682


>gi|77461073|ref|YP_350580.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
 gi|123730904|sp|Q3K6L5|SYI_PSEPF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77385076|gb|ABA76589.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
          Length = 943

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++ +T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDESGRKMSKSLGNVIAPQKVNDTLG-------ADIMRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   +  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEMAVSEQILQRSADAYRRIRNTAR 666


>gi|311107263|ref|YP_003980116.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310761952|gb|ADP17401.1| isoleucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 953

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGQPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVEGYRRIRNT 679


>gi|229049724|ref|ZP_04194281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|229112480|ref|ZP_04242017.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228670860|gb|EEL26167.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228722637|gb|EEL74025.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADQYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|45184691|ref|NP_982409.1| AAL133Wp [Ashbya gossypii ATCC 10895]
 gi|44980037|gb|AAS50233.1| AAL133Wp [Ashbya gossypii ATCC 10895]
          Length = 567

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 33/168 (19%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++  H     A    A  +     + +H  +L+ +G KMSKS GN +   E++E
Sbjct: 307 HLVGKDIVKFHTIYWPAILLAA-GLPLPEKVVVHGHWLS-DGVKMSKSLGNVVVPEEMIE 364

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAEILL-SKWPQTSTSKGIID 348
                   +    +R  +L     + I+    F+ + L +   LL SKW       G   
Sbjct: 365 -------KYDTDPMRWFILEH---DTIEHDASFSEEGLCQTRELLCSKWGNLLHRCGGPK 414

Query: 349 PAVLSALYNDLNTVSAIQAL-HKLARESTKNH-----DLLPIFNASAH 390
                      N   A+Q   HK   + TKN+     +LL      A 
Sbjct: 415 ----------FNIHRAVQKFHHKPITDLTKNNPELYGNLLSRLTTLAD 452


>gi|33592821|ref|NP_880465.1| isoleucyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|81425095|sp|Q7VXK3|SYI_BORPE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33572469|emb|CAE42039.1| isoleucyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382234|gb|AEE67081.1| isoleucyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 953

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGHPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVESYRRIRNT 679


>gi|327309987|ref|YP_004336884.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946466|gb|AEA11572.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 940

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 16 TEFQAI-DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
            F+   +P   + ++     Y     HIG+ R  ++ D++ R  R+  
Sbjct: 18 RVFEPTPEPGKPKFFITAAYPYPNGAIHIGHGRTYLIADIMARYHRHKG 66



 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 34/210 (16%), Positives = 69/210 (32%), Gaps = 30/210 (14%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    +         E      + NG++ +EG KMSKS  N + + + ++  
Sbjct: 592 SGKDLIPNHLTFFLFNHSAIFPKELWPRGIVANGWVLVEGEKMSKSKRNVLALGKAVD-- 649

Query: 296 KFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------- 346
                 + A  +R  + +     + +DF           L +      S           
Sbjct: 650 -----QFGADPLRATLAISAEVDQDLDFRANVARSVARHLEEIYNLVVSTAERATRDGEG 704

Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILG 393
                       +      AL +     +A+  L+ + R   +  +++ +   A   +L 
Sbjct: 705 LPEMWLRSEAASLLEKAAKALDDVAIRQAAVYVLYDMRRALERYLEMVEVPSRAVLEVLK 764

Query: 394 I-EVCKEHLNKNISIAIEKLVQERLILLKM 422
              V  E    +++  + + + ER    K 
Sbjct: 765 AWAVAMEPFVPHLAEELWERLGERPFAAKA 794


>gi|300023246|ref|YP_003755857.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525067|gb|ADJ23536.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 520

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 49/151 (32%), Gaps = 12/151 (7%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  DV+ R  R    +        +T  D+  ++    +  +         
Sbjct: 18  PHIGHAYEAIATDVIARFERLDGKDVFF-----LTGTDEHGLK---MKQTAEREGVTPRE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+ +F++    L  L+     R T   H      L + +   G  ++      +  
Sbjct: 70  LADRNSARFIEMVKTLG-LSNDDFIRTTEQRHYDACAELWRRMEKAGDIFKRPYGGWYSV 128

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                Y   S  ++ E +          + N
Sbjct: 129 R-DETYYKESETEVREGQRFATATGTPVEWN 158



 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 66/176 (37%), Gaps = 32/176 (18%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D++  H     A    A  +     ++ H GF+  +G KMSKS GN +   +L+
Sbjct: 258 VHVIGKDIVRFHAVYWPAFLMSA-GLPLPKRVFSH-GFVLNKGEKMSKSVGNVVDPFDLV 315

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPI-----DFTVQRL-----TEAEILLSKWPQTST 342
                  +++    +R   L    RE +     +++ + +      +    L    Q S 
Sbjct: 316 -------KAYGRDALRYFFL----REVMFGQDGNYSAEAIANRINADLANNLGNLAQRSL 364

Query: 343 S-------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
           S         I  P   SA   D   ++A  AL++ AR       +    +A   +
Sbjct: 365 SMIFKNCDGAIPQPGAFSA--EDTAILNATDALYEAARGEMDRQAITKYLDAVWAV 418


>gi|225181686|ref|ZP_03735126.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
 gi|225167667|gb|EEG76478.1| isoleucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
          Length = 914

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 24/122 (19%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +    ++       + + A ++RL +  T +R  +  +   
Sbjct: 590 HGWVVDGEGKKMSKSLGNVVAPEHII-------KQYGADILRLWVSSTDFRSDVRVSQDI 642

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSAL---YNDLN-TVSAIQ--ALHKLARESTKNHD 380
           L +   +  K   T           +  +    +D N    A+   AL +L R +     
Sbjct: 643 LKQLAEVYRKIRNT-----------IRYMLGNCHDFNPQAHALSYDALDELDRYALHRLQ 691

Query: 381 LL 382
           +L
Sbjct: 692 VL 693


>gi|147676404|ref|YP_001210619.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146272501|dbj|BAF58250.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 70/203 (34%), Gaps = 52/203 (25%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           G+  E  ++   Y     D+H  G D++  H          A          + +G+L L
Sbjct: 268 GYGTEDDSLFKKYWPA--DVHLMGKDIVRFHSVIWPILLMAAGLELP--RQVVGHGWLLL 323

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML------MTHYREPIDFTVQRL 327
           E  KMSKS GN +    L++        +    IR  +L         Y     ++ + L
Sbjct: 324 ESGKMSKSKGNVVDPLVLID-------KYGVDAIRYYLLRELPFGADGY-----YSEEAL 371

Query: 328 TE----------------AEILLSKWPQTST---------SKGIID-----PAVLSALYN 357
            E                +  ++ K+ Q             + +ID     PA +  L +
Sbjct: 372 VERINKDLANDLGNLVSRSIAMVEKYFQGRVQPPGLPEGPDRELIDLAEQTPAAVEELMD 431

Query: 358 DLNTVSAIQALHKLARESTKNHD 380
            ++   A+ A+ +L   + K  D
Sbjct: 432 KMDLSGALAAIWRLVGRANKYVD 454


>gi|187923016|ref|YP_001894658.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|187714210|gb|ACD15434.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 711

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT   +++
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSVID 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 8/84 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         I+ RA +E            
Sbjct: 32  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYVGADDTHGTPIMLRAEKEGL------TPKQ 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +  Q+  +D          + 
Sbjct: 84  LIDRVWQEHKRDFDSFGISFDNYY 107


>gi|78211836|ref|YP_380615.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
 gi|78196295|gb|ABB34060.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9605]
          Length = 974

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 601 SVAVNGHAPYKRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRL 660

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 661 WVSSVDYSADVPIGAGILRQLADVYRKVRNTSR 693


>gi|317407733|gb|EFV87662.1| IleS protein [Achromobacter xylosoxidans C54]
          Length = 953

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGQPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVEGYRRIRNT 679


>gi|301794641|emb|CBW37092.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae INV104]
          Length = 930

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|301065901|ref|YP_003787924.1| leucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300438308|gb|ADK18074.1| Leucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 803

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    ++     L     KMSKS GN +  +++++        + A  +RL  M 
Sbjct: 552 AIPNKEPFQRLFNQGMILGDNHEKMSKSKGNVVNPDDVVD-------EYGADTLRLYEMF 604

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYN---DLNTVSAIQAL 368
           M      I ++ + L  A   L + W      +G +   + + + +   D       +  
Sbjct: 605 MGPLDAGIAWSTKGLAGARKFLDRVWSAFIDDEGKLRDRITT-INDGRLD-------KVY 656

Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           ++  ++ T+++D L    A + ++         +      +E  V+ 
Sbjct: 657 NETVKKVTEDYDALHFNTAISQMMVFINSARKDDDLPLEYVEGFVKM 703


>gi|293606194|ref|ZP_06688557.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292815341|gb|EFF74459.1| isoleucine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 953

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGQPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVEGYRRIRNT 679


>gi|297736880|emb|CBI26081.3| unnamed protein product [Vitis vinifera]
          Length = 1221

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S         +++  H   L+ +G KMSKS GN +    ++E  K       + A V+RL
Sbjct: 830 SVATKGRAPYSSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGKNLKEAPGYGADVLRL 889

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y        Q L +   +  K   T
Sbjct: 890 WVSSVDYTGDAMIGAQVLRQMSDIYRKLRGT 920


>gi|251810623|ref|ZP_04825096.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|282876376|ref|ZP_06285243.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|251805783|gb|EES58440.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295401|gb|EFA87928.1| isoleucine--tRNA ligase [Staphylococcus epidermidis SK135]
          Length = 916

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLSDVRISDEI 637

Query: 327 LTEAEILLSKWPQT 340
           L +   +  K   T
Sbjct: 638 LKQTSDVYRKIRNT 651


>gi|228476843|ref|ZP_04061488.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
 gi|228251417|gb|EEK10562.1| isoleucine-tRNA ligase [Streptococcus salivarius SK126]
          Length = 932

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQ---- 366
                   +  ++  L++      K   T           L A  +D N T  A+     
Sbjct: 623 TSVDTTNDVRISMDILSQVSESYRKIRNTLR--------FLIANTSDFNPTTDAVAFEDL 674

Query: 367 ------------ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                        L K  R++  N + L I+ A  + + +E+   +L+
Sbjct: 675 RSVDQYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVELSAFYLD 722


>gi|227535647|ref|ZP_03965696.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|227186777|gb|EEI66844.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
          Length = 803

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    ++     L     KMSKS GN +  +++++        + A  +RL  M 
Sbjct: 552 AIPNKEPFQRLFNQGMILGDNHEKMSKSKGNVVNPDDVVD-------EYGADTLRLYEMF 604

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYN---DLNTVSAIQAL 368
           M      I ++ + L  A   L + W      +G +   + + + +   D       +  
Sbjct: 605 MGPLDAGIAWSTKGLAGARKFLDRVWSAFIDDEGKLRDRITT-INDGRLD-------KVY 656

Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           ++  ++ T+++D L    A + ++         +      +E  V+ 
Sbjct: 657 NETVKKVTEDYDALHFNTAISQMMVFINSARKDDDLPLEYVEGFVKM 703


>gi|239631095|ref|ZP_04674126.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239525560|gb|EEQ64561.1| leucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 803

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    ++     L     KMSKS GN +  +++++        + A  +RL  M 
Sbjct: 552 AIPNKEPFQRLFNQGMILGDNHEKMSKSKGNVVNPDDVVD-------EYGADTLRLYEMF 604

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYN---DLNTVSAIQAL 368
           M      I ++ + L  A   L + W      +G +   + + + +   D       +  
Sbjct: 605 MGPLDAGIAWSTKGLAGARKFLDRVWSAFIDDEGKLRDRITT-INDGRLD-------KVY 656

Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           ++  ++ T+++D L    A + ++         +      +E  V+ 
Sbjct: 657 NETVKKVTEDYDALHFNTAISQMMVFINSARKDDDLPLEYVEGFVKM 703


>gi|147804918|emb|CAN78050.1| hypothetical protein VITISV_015862 [Vitis vinifera]
          Length = 1088

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S         +++  H   L+ +G KMSKS GN +    ++E  K       + A V+RL
Sbjct: 697 SVATKGRAPYSSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGKNLKEAPGYGADVLRL 756

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y        Q L +   +  K   T
Sbjct: 757 WVSSVDYTGDAMIGAQVLRQMSDIYRKLRGT 787


>gi|73668541|ref|YP_304556.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|109895000|sp|Q46DR6|SYR_METBF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72395703|gb|AAZ69976.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 569

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 16/109 (14%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI--IERARQEHPSIPI 92
                H+G+ R  I+ D L R+LR    +  V Y  N  D+  +I  +  A +       
Sbjct: 125 PNGPLHVGHIRNSIIGDTLARILRRAGYDVEVQYYVN--DMGRQIAVVSWACERFELDLS 182

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
             + S I     +                 P    ++ ++  L++ +  
Sbjct: 183 RKSDSAIADVYIKA--------NVEL-DKNP---EYVKEIDALMEKVEA 219


>gi|27467786|ref|NP_764423.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|39932185|sp|Q8CSX1|SYI_STAES RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27315330|gb|AAO04465.1|AE016746_255 Ile-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|329736328|gb|EGG72600.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 916

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKQTSDVYRKIRNT 651


>gi|329729986|gb|EGG66377.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 916

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKQTSDVYRKIRNT 651


>gi|299822786|ref|ZP_07054672.1| valine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816315|gb|EFI83553.1| valine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 884

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I QS      +   +  +H    + EGRKMSKS GN +   E++
Sbjct: 484 VLVTGYDIIFFWVSRMIFQSLEFTGHKPFNDTLLHGLVRDAEGRKMSKSLGNGVDPIEVI 543

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +        + A  +R  ML T    P   + F+ +++  +   ++K    S 
Sbjct: 544 D-------KYGADSLRY-MLSTG-TSPGQDLKFSFEKIEASWNFINKIWNASR 587


>gi|306840970|ref|ZP_07473711.1| isoleucyl-tRNA synthetase [Brucella sp. BO2]
 gi|306289027|gb|EFM60292.1| isoleucyl-tRNA synthetase [Brucella sp. BO2]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|323525136|ref|YP_004227289.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
 gi|323382138|gb|ADX54229.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
          Length = 718

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT   +++
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSVID 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387



 Score = 36.8 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 8/84 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         ++ RA +E            
Sbjct: 32  IHIGHLVEYIQTDIWVRALRMHGHE--VYYVGADDTHGTPVMLRAEKE------GVTPKQ 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +  Q+  +D          + 
Sbjct: 84  LIDRVWQEHKRDFDSFGISFDNYY 107


>gi|170691989|ref|ZP_02883153.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143273|gb|EDT11437.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 715

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT   +++
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSVID 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387



 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 28/84 (33%), Gaps = 8/84 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         ++ RA +E            
Sbjct: 32  IHIGHLVEYIQTDIWVRALRMHGHE--VYYVGADDTHGTPVMLRAEKE------GITPKQ 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +  Q+  +D          + 
Sbjct: 84  LIDRVWQEHKRDFDSFGISFDNYY 107


>gi|170693571|ref|ZP_02884729.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170141353|gb|EDT09523.1| isoleucyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|149001939|ref|ZP_01826893.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
 gi|147759748|gb|EDK66738.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
          Length = 392

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 32  SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 84

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 85  TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 144

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 145 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 184


>gi|56416673|ref|YP_153747.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821293|sp|Q5PB38|SYL_ANAMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56387905|gb|AAV86492.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 829

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 29/129 (22%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  + ++       + + A  +RL ML  T     I+++   +  A   L
Sbjct: 593 EKMSKSKKNVVDPSHII-------KKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWRYL 645

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHD------L 381
            +  +       I          D +T          +  +HKL R  + + +       
Sbjct: 646 ERLWRLFEDNSSIGA--------DFDTADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 697

Query: 382 LPIFNASAH 390
           +  F   ++
Sbjct: 698 VAKFREMSN 706



 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 48/147 (32%), Gaps = 19/147 (12%)

Query: 17  EFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           +F+      I  YV G   Y     H+G+ R   + DV+ R  R +  +           
Sbjct: 22  DFKIAGNDGINCYVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLK----------- 70

Query: 75  IDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
           +   I   A     E+ ++      ++ T +N +   K    +       +  AT     
Sbjct: 71  VLHPIGWDAFGLPAENAALSYGVNPAVWTERNIESMRKQLKSIGISYNWDRELATCKEDY 130

Query: 132 M---IYLIQNIILHGHAYEANNEIIFD 155
                    + +  G AY   + + +D
Sbjct: 131 YKHEQAFFLDFLQQGLAYRKESWVNWD 157


>gi|323701662|ref|ZP_08113334.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323533435|gb|EGB23302.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 514

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 58/185 (31%), Gaps = 50/185 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D++  H           +         I +G+L L+  KMSKS GN +  + L
Sbjct: 254 DIHLVGKDIVRFHTIIWPIMLMALNL--PLPKKVIGHGWLLLDSGKMSKSKGNVVDPHTL 311

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------- 337
           ++        +    +R  +L       + F    L   E L+ +               
Sbjct: 312 VD-------KYGVDAVRYFLLR-----ELPFGSDGLYSEEALVKRINTDLANDYGNLLSR 359

Query: 338 -------PQTSTSKGIIDPAVLSALYNDL--NTV-------------SAIQALHKLARES 375
                   Q    +     A   A   DL  NT              +A+ A+ +L   +
Sbjct: 360 SATMVQKYQEGVLQAPGPAAGPDAELIDLAINTPKLVAEYMDKSEISNALAAIWQLVGRA 419

Query: 376 TKNHD 380
            K  +
Sbjct: 420 NKYLE 424



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 20/135 (14%)

Query: 33  PTVY---------DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           PT Y         D  HIG+A   +  D + R  R    +     V  +T  D+      
Sbjct: 4   PTFYITTPIYYPSDKLHIGHAYTTVAADAMARFKRLTGYD-----VWFLTGSDEH---GQ 55

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIIL 141
           + E  +   N             F K  +RL         R T+  H   +  + Q +  
Sbjct: 56  KIERAAKAKNQTPKEYVDHIVDGFKKLWSRLDVSYNDF-IRTTDERHRKVVQQIFQQLYD 114

Query: 142 HGHAYEANNEIIFDT 156
            G  Y++  E  + T
Sbjct: 115 QGDIYKSEYEGWYCT 129


>gi|320582770|gb|EFW96987.1| Cytosolic leucyl tRNA synthetase, ligates leucine to the
           appropriate tRNA [Pichia angusta DL-1]
          Length = 1093

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 32/144 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G DLI  H    I       + +        NG L L   KMSKS GNF+T+ ++
Sbjct: 685 DMSVSGKDLIPNHLTFFIYCHTALFKKQFWPKGIRCNGHLMLNNAKMSKSTGNFMTLEQM 744

Query: 292 -------------------LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
                              +E   F   +  A ++R+  L        ++  + +     
Sbjct: 745 VEKFGADASRIALADAGDSVEDANFEESNANAAILRMYTLR-------EWAEETI----K 793

Query: 333 LLSKWPQTSTSKGIIDPAVLSALY 356
            +  +   +      D A  + + 
Sbjct: 794 TIDSFR--TGEYNFFDKAFDNEMN 815


>gi|229032677|ref|ZP_04188640.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228728676|gb|EEL79689.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|222475038|ref|YP_002563453.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
 gi|222419174|gb|ACM49197.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
          Length = 829

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 29/129 (22%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  + ++       + + A  +RL ML  T     I+++   +  A   L
Sbjct: 593 EKMSKSKKNVVDPSHII-------KKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWRYL 645

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHD------L 381
            +  +       I          D +T          +  +HKL R  + + +       
Sbjct: 646 ERLWRLFEDNSSIGA--------DFDTADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 697

Query: 382 LPIFNASAH 390
           +  F   ++
Sbjct: 698 VAKFREMSN 706



 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 48/147 (32%), Gaps = 19/147 (12%)

Query: 17  EFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           +F+      I  YV G   Y     H+G+ R   + DV+ R  R +  +           
Sbjct: 22  DFKIAGNDGINCYVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLK----------- 70

Query: 75  IDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
           +   I   A     E+ ++      ++ T +N +   K    +       +  AT     
Sbjct: 71  VLHPIGWDAFGLPAENAALSYGVNPAVWTERNIESMRKQLKSIGISYNWDRELATCKEDY 130

Query: 132 M---IYLIQNIILHGHAYEANNEIIFD 155
                    + +  G AY   + + +D
Sbjct: 131 YKHEQAFFLDFLQQGLAYRKESWVNWD 157


>gi|209522384|ref|ZP_03270997.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209497181|gb|EDZ97423.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 711

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT   +++
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSVID 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387


>gi|146329527|ref|YP_001209014.1| isoleucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|166200205|sp|A5EWT0|SYI_DICNV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|146232997|gb|ABQ13975.1| isoleucyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
          Length = 924

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +GRKMSKS GN +  N++++T         A ++RL +
Sbjct: 577 ASAITGKPPYKALLTHGFTVDEDGRKMSKSLGNVVDPNQVIKTLG-------ADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   +  +   L +      +   T
Sbjct: 630 ASADYTAEVSLSPNILNQRADAYRRMRNT 658


>gi|47459242|ref|YP_016104.1| isoleucyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614217|sp|Q6KHN7|SYI_MYCMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|47458571|gb|AAT27893.1| isoleucyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 885

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 9/123 (7%)

Query: 220 SAMSSHYLGKV--FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           ++M     G    +D++  G D       + +  S           +  H   L+ +G K
Sbjct: 532 TSMGVKIEGAPVPWDVYLEGSDQYRGWFNSSLINSVVYYNQAPFKKLVSHGFVLDEKGNK 591

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN +   E++         + A ++RL +  + Y   +      + +   +  K+
Sbjct: 592 MSKSKGNVVLPQEIIS-------KFGADILRLWVANSEYTSDVTIGENIINQNVEIYRKF 644

Query: 338 PQT 340
             T
Sbjct: 645 RNT 647


>gi|29375390|ref|NP_814544.1| leucyl-tRNA synthetase [Enterococcus faecalis V583]
 gi|48428540|sp|Q837N5|SYL_ENTFA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29342850|gb|AAO80614.1| leucyl-tRNA synthetase [Enterococcus faecalis V583]
          Length = 804

 Score = 42.5 bits (99), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 583 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 636 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 693


>gi|227554917|ref|ZP_03984964.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|227175943|gb|EEI56915.1| leucyl-tRNA synthetase [Enterococcus faecalis HH22]
 gi|315573422|gb|EFU85613.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309B]
 gi|315581340|gb|EFU93531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0309A]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|225432320|ref|XP_002276207.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 1105

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S         +++  H   L+ +G KMSKS GN +    ++E  K       + A V+RL
Sbjct: 714 SVATKGRAPYSSVITHGFVLDEKGFKMSKSLGNVVDPRTVIEGGKNLKEAPGYGADVLRL 773

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y        Q L +   +  K   T
Sbjct: 774 WVSSVDYTGDAMIGAQVLRQMSDIYRKLRGT 804


>gi|197303308|ref|ZP_03168348.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
 gi|197297592|gb|EDY32152.1| hypothetical protein RUMLAC_02031 [Ruminococcus lactaris ATCC
           29176]
          Length = 882

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 16/167 (9%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              + IH    + +GRKMSKS GN I   E+
Sbjct: 480 DVLVTGYDIIFFWVIRMVFSGYAHTGKAPFNTVLIHGLVRDSQGRKMSKSLGNGIDPLEI 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +RL ++  +   P   + F  +R+  +    +K W  +      +
Sbjct: 540 ID-------QYGADALRLTLITGN--APGNDMRFYNERVEASRNFANKVWNASRFILMNM 590

Query: 348 DPAVLSALYNDLNTVS---AIQALHKLARESTKNHDLLPIFNASAHI 391
              V+    + L T +    + A++ LA++ T+N D   +  A   +
Sbjct: 591 KENVVEKPEDALLTPADRWILSAVNTLAKDVTENMDKFELGIAVQKV 637


>gi|163857636|ref|YP_001631934.1| leucyl-tRNA synthetase [Bordetella petrii DSM 12804]
 gi|189082984|sp|A9HWW6|SYL_BORPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|163261364|emb|CAP43666.1| leuS [Bordetella petrii]
          Length = 885

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/228 (17%), Positives = 66/228 (28%), Gaps = 30/228 (13%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + D++ R LR       +          D     
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------DAFGMP 91

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLIQ---- 137
           A  E+ +I      +  T  N     K    +         R      P+     Q    
Sbjct: 92  A--ENAAIKSKVPPAKWTYDNIAYMKKQMQAMGL--AIDWSREMCACDPEYYKWNQWLFL 147

Query: 138 NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
            ++  G AY     +              +  ++ + + G R      K+    + L   
Sbjct: 148 KMLEKGIAYRKTQVVNWDPVDQT----VLANEQVIDGR-GWRSGALVEKREIPGYYLRIT 202

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
               E         G PGW     AM  +++GK       G+   FPH
Sbjct: 203 DYADELL--DQVRSGLPGWPERVRAMQENWIGK-----SEGVRFAFPH 243


>gi|86159149|ref|YP_465934.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775660|gb|ABC82497.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 858

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 17/130 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+AR   + D L R LR               D+   I   A     E+ +
Sbjct: 70  PYPSGAMHMGHARVYTIGDALARHLRMRGF-----------DVLHPIGFDALGLPAENAA 118

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAY 146
           I      +  T +N   F  +  RL       +   T    +     +    ++  G AY
Sbjct: 119 IKDGRHPAERTRENVVSFRAEMKRLGYSFDWDRELVTADASYYRWNQWFFLKMLEKGIAY 178

Query: 147 EANNEIIFDT 156
               ++ + T
Sbjct: 179 RRQGKVNWCT 188


>gi|315151630|gb|EFT95646.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0012]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|295706932|ref|YP_003600007.1| leucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804591|gb|ADF41657.1| leucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 804

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 15/135 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++E+         A  +RL  M M      I ++ + L  A   L + W    
Sbjct: 583 NVVNPDEIVESHG-------ADTLRLYEMFMGPLDASIAWSTKGLDGARRFLDRVWRLLV 635

Query: 342 TSKGIIDPAVLSALY 356
              G +   V  +  
Sbjct: 636 DDNGELSSKVQESND 650


>gi|260434590|ref|ZP_05788560.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
 gi|260412464|gb|EEX05760.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 8109]
          Length = 974

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 601 SVAVNGHAPYKRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRL 660

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 661 WVSSVDYSADVPIGAGILRQLADVYRKVRNTSR 693


>gi|257415369|ref|ZP_05592363.1| leucyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257157197|gb|EEU87157.1| leucyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|254994884|ref|ZP_05277074.1| leucyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
          Length = 824

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 29/129 (22%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  + ++       + + A  +RL ML  T     I+++   +  A   L
Sbjct: 588 EKMSKSKKNVVDPSHII-------KKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWRYL 640

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHD------L 381
            +  +       I          D +T          +  +HKL R  + + +       
Sbjct: 641 ERLWRLFEDNSSIGA--------DFDTADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 692

Query: 382 LPIFNASAH 390
           +  F   ++
Sbjct: 693 VAKFREMSN 701



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 46/144 (31%), Gaps = 13/144 (9%)

Query: 17  EFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           +F+      I  YV G   Y     H+G+ R   + DV+ R  R +  +           
Sbjct: 17  DFKIAGNDGINCYVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHGLKVL------HPI 70

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM-- 132
             D     A     S  +N   ++ T +N +   K    +       +  AT        
Sbjct: 71  GWDAFGLPAENAALSYRVN--PAVWTERNIESMRKQLKSIGISYNWDREIATCKEDYYKH 128

Query: 133 -IYLIQNIILHGHAYEANNEIIFD 155
                 + +  G AY   + + +D
Sbjct: 129 EQAFFLDFLQQGLAYRKESWVNWD 152


>gi|300859685|ref|ZP_07105773.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
 gi|300850503|gb|EFK78252.1| leucine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
          Length = 804

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 583 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 636 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 693


>gi|241956714|ref|XP_002421077.1| mitochondrial leucyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
 gi|223644420|emb|CAX41234.1| mitochondrial leucyl-tRNA synthetase, putative [Candida
           dubliniensis CD36]
          Length = 923

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 44/156 (28%), Gaps = 24/156 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           HIG+ R   + DV+ R  R               ++   +   A     E+ ++  N   
Sbjct: 72  HIGHLRVYTISDVVARYKRSKGF-----------NVIHPMGWDAFGLPAENAAVERNINP 120

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI 152
           S  T  N  +               Q       P+     Q I       G AY    EI
Sbjct: 121 SEWTETNIAKMKNQMETF-LADFDWQREVNTSSPEYYKWTQKIFLMLFERGLAYRKAAEI 179

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                 +       +  ++D +    R      K+N
Sbjct: 180 NWDPVDNT----VLANEQVDAEGRSWRSGAIVEKRN 211


>gi|167827656|ref|ZP_02459127.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 317

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166


>gi|116873095|ref|YP_849876.1| leucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|123461123|sp|A0AJB5|SYL_LISW6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116741973|emb|CAK21097.1| leucyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 803

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 64/162 (39%), Gaps = 20/162 (12%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +R+  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRMYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSA--IQALHKLAR 373
              I +    L  A   L + W    T +GI+   V +       T +A   +A H + +
Sbjct: 609 DASIAWNENGLEGARKFLDRIWRLFVTEEGILAEKVTT-------TANANLEKAYHHMVK 661

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQ 414
             T +++ L  FN     L I + + +   +I    +E  VQ
Sbjct: 662 TVTNHYENLR-FNTGISQLMIFINEAYKQDSIPKEYVEGFVQ 702


>gi|116494392|ref|YP_806126.1| leucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191637728|ref|YP_001986894.1| leucyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|122264182|sp|Q03AT8|SYL_LACC3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693022|sp|B3WCD5|SYL_LACCB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116104542|gb|ABJ69684.1| leucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712030|emb|CAQ66036.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
           [Lactobacillus casei BL23]
 gi|327381793|gb|AEA53269.1| Leucyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327384954|gb|AEA56428.1| Leucyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 803

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 61/167 (36%), Gaps = 20/167 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    ++     L     KMSKS GN +  +++++        + A  +RL  M 
Sbjct: 552 AIPNKEPFQRLFNQGMILGDNHEKMSKSKGNVVNPDDVVD-------EYGADTLRLYEMF 604

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYN---DLNTVSAIQAL 368
           M      I ++ + L  A   L + W      +G +   + + + +   D       +  
Sbjct: 605 MGPLDAGIAWSTKGLAGARKFLDRVWSAFIDDEGKLRDRITT-INDGRLD-------KVY 656

Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           ++  ++ T+++D L    A + ++         +      +E  V+ 
Sbjct: 657 NETVKKVTEDYDALHFNTAISQMMVFINSARKDDDLPLEYVEGFVKM 703


>gi|30023071|ref|NP_834702.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229130292|ref|ZP_04259251.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|68566040|sp|Q815U6|SYM2_BACCR RecName: Full=Methionyl-tRNA synthetase 2; AltName:
           Full=Methionine--tRNA ligase 2; Short=MetRS 2
 gi|29898631|gb|AAP11903.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228653225|gb|EEL09104.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADQYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|327400045|ref|YP_004340884.1| Lysyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315553|gb|AEA46169.1| Lysyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 494

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 35/97 (36%), Gaps = 15/97 (15%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER------ARQ 85
           G T     H+GN R M+  D + R +    GE  + Y   I D  D + +R        +
Sbjct: 27  GITPSGHIHLGNLREMLTADAVRRAVIDRGGEAEMIY---IADTFDPLRKRYPFLPEEYE 83

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLAC 116
            +  +P+++                Q F++    L  
Sbjct: 84  NYVGMPLSEIPDPEGCHESYAEHFLQPFLESLDILGI 120


>gi|319401513|gb|EFV89723.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 916

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKQTSDVYRKIRNT 651


>gi|284112383|ref|ZP_06386564.1| Isoleucyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
 gi|283829710|gb|EFC34035.1| Isoleucyl-tRNA synthetase [Candidatus Poribacteria sp. WGA-A3]
          Length = 720

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G+KMSKS GN ++  +++       +   A ++RL +    Y+E +  + Q 
Sbjct: 604 HGFVVDGQGKKMSKSAGNVVSPQDVI-------KQHGAEILRLWVAAQDYQEDLRISSQI 656

Query: 327 LTEAEILLSKWPQT 340
           LT+      K   T
Sbjct: 657 LTQLVEAYRKIRNT 670


>gi|257086155|ref|ZP_05580516.1| leucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256994185|gb|EEU81487.1| leucyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315027603|gb|EFT39535.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|168205784|ref|ZP_02631789.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662741|gb|EDT15424.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 645

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +E    ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALGLELPKQVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L+         + A  +R  +L       I F    L   EI + K              
Sbjct: 312 LVNM-------FGADAVRYYLLR-----EIPFGSDGLFNNEIFIKKVNTDLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  +++ AL          + L    A++++  L   
Sbjct: 360 RTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLISR 419

Query: 375 STKNHD 380
           + K  D
Sbjct: 420 ANKYID 425


>gi|121606119|ref|YP_983448.1| isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
 gi|120595088|gb|ABM38527.1| Isoleucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
          Length = 944

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 43/141 (30%), Gaps = 14/141 (9%)

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           H E SA  +    +  D H G          + +  +C          +  H   ++ +G
Sbjct: 573 HAEQSAWPADLYLEGHDQHRGWFH-------SSLLTACAMYDHAPYKGLLTHGFTVDGKG 625

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
           RKMSKS GN +    +            A +IRL    T Y   +    + L        
Sbjct: 626 RKMSKSEGNVVAPQAVSGKLG-------AEIIRLWCASTDYSGDLAIDDKILARVVDAYR 678

Query: 336 KWPQTSTSKGIIDPAVLSALY 356
           +   T             AL 
Sbjct: 679 RIRNTLRFLMANVSDFDPALD 699


>gi|76788163|ref|YP_330587.1| leucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77406149|ref|ZP_00783221.1| leucyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|123744499|sp|Q3JYR6|SYL_STRA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76563220|gb|ABA45804.1| leucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77175229|gb|EAO78026.1| leucyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 833

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 49/146 (33%), Gaps = 26/146 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K I                 AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEITKENSGALDKVYNETVKAVTEQVDQMKFNT--AIAQLMVFVNAANKED 719

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNI 405
            L   +      L I     HL + +
Sbjct: 720 KLFSDYAKGFVQL-IAPFAPHLGEEL 744


>gi|312963226|ref|ZP_07777710.1| Leucyl-tRNA synthetase [Pseudomonas fluorescens WH6]
 gi|311282492|gb|EFQ61089.1| Leucyl-tRNA synthetase [Pseudomonas fluorescens WH6]
          Length = 868

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 37/140 (26%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  QPGKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMLG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +  N A +  T +N          L  LA       T   P      Q  
Sbjct: 87  ENAA------MKNNVAPAKWTYENIAYMKTQLRSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|294501584|ref|YP_003565284.1| leucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351521|gb|ADE71850.1| leucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 804

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 44/135 (32%), Gaps = 15/135 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++E+         A  +RL  M M      I ++ + L  A   L + W    
Sbjct: 583 NVVNPDEIVESHG-------ADTLRLYEMFMGPLDASIAWSTKGLDGARRFLDRVWRLLV 635

Query: 342 TSKGIIDPAVLSALY 356
              G +   V  +  
Sbjct: 636 DDNGELSSKVQESND 650


>gi|257457329|ref|ZP_05622500.1| lysyl-tRNA synthetase [Treponema vincentii ATCC 35580]
 gi|257445251|gb|EEV20323.1| lysyl-tRNA synthetase [Treponema vincentii ATCC 35580]
          Length = 533

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
          Y C  G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 31 YTCASGITPSGTVHIGNFREIISVDLVVRALRDRGKKVRFIYSWDDYDV 79


>gi|268679054|ref|YP_003303485.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617085|gb|ACZ11450.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 528

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  ++ D L R+ ++   +    Y  N  D  +++       + +   
Sbjct: 114 PT--GPLHIGHARGAVIGDALARIGKHLGYQITTEYYVN--DAGNQVDLLGLSIYLAGRE 169

Query: 93  NDAISIIT---SKNTQQFVKDTT 112
           N     +T        +++ D  
Sbjct: 170 NILGLHVTWPEEFYRGEYIVDLA 192


>gi|226313405|ref|YP_002773299.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
 gi|254782371|sp|C0ZG86|SYI_BREBN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|226096353|dbj|BAH44795.1| isoleucyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
          Length = 925

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 7/87 (8%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                    ++  H   L+ EGRKMSKS GN I   ++++          A ++RL +  
Sbjct: 571 AVYGTAPYKSVLSHGFALDGEGRKMSKSLGNVIVPQQVIDKMG-------ADILRLWVAS 623

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT 340
             Y+  +  +   L +   +  K   T
Sbjct: 624 VDYQADVRISDAILNQIAEVYRKIRNT 650



 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 41/138 (29%), Gaps = 13/138 (9%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERARQE 86
           GP  Y     HIG+A   I+ D + R                   +  I+  II     +
Sbjct: 55  GP-PYANGDIHIGHALNKILKDFIVRYKSMAGFYAPYIPGWDTHGLP-IEQAIINAQGLD 112

Query: 87  HPSIPINDA---ISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNII 140
             SI +ND              +      RL        P  T    +    I +   + 
Sbjct: 113 RRSIEVNDFRQRCEEYAWSYIDKQRDQFKRLGVRGDWENPYVTLLPEYEANQIRVFGEMA 172

Query: 141 LHGHAYEANNEIIFDTSS 158
             G+ Y+    + +  SS
Sbjct: 173 KKGYIYKGLRCVYWSPSS 190


>gi|91784973|ref|YP_560179.1| isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123168144|sp|Q13UW2|SYI_BURXL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|91688927|gb|ABE32127.1| Isoleucyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|18311505|ref|NP_563439.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|18146189|dbj|BAB82229.1| probable methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 514

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     +  D+L R  R    E  V +V         I+ +A++      IN +   +
Sbjct: 17  HIGRVSSWMAGDILARYHRAKGDE--VIFVSGSDCHGSPILNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R T+   H  Q+  +I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFNIFTR-TDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYC 125


>gi|320100795|ref|YP_004176387.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753147|gb|ADV64905.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 514

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 33/127 (25%), Gaps = 11/127 (8%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             HIG+A   +  DVL R  R                +        + +  +        
Sbjct: 21  PPHIGHAYTSVFADVLARFNRLIGNNVFF--------LTGNDEHGLKIQRVAEKAGKHPK 72

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFD 155
               +    + +    L      H  R T+  H   +      I   G  Y+A    ++ 
Sbjct: 73  EFVDEMASVYREYWRTLGISY-DHFIRTTDPYHEKAVKEAFSYIHGKGLIYKAKYSGMYC 131

Query: 156 TSSIPNY 162
                 Y
Sbjct: 132 VDCEKYY 138


>gi|302391662|ref|YP_003827482.1| isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
 gi|302203739|gb|ADL12417.1| Isoleucyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
          Length = 927

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 68/164 (41%), Gaps = 13/164 (7%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
               L +  DI+  G D       + +  S           +  +   ++  G+KMSKS 
Sbjct: 546 IREELERPADIYLEGTDQYRGWFNSSLLTSIAYKGEAPYKGVVTNGFTVDANGKKMSKSQ 605

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-- 340
           GN ++ +E+++        + A ++RL +  + ++E +  + + L +   +  +   T  
Sbjct: 606 GNVVSPHEVID-------QYGADILRLWVASSDFKEDVRVSDKILQQNAEVYRRIRNTFR 658

Query: 341 --STSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
               +    DP   +  Y++L  +   A+  L KL  E T+ ++
Sbjct: 659 YILGNMDNFDPVENTVEYDELLEIDKWALHKLQKLVDEITEAYE 702


>gi|294501005|ref|YP_003564705.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294350942|gb|ADE71271.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 921

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 20/119 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 SVAVTGEAPYKGVLSHGFALDGEGRKMSKSLGNVVIPEKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLN-TVSAIQA 367
               Y+  +  +   L +   +  K   T              L N  D N T  A+  
Sbjct: 622 ASVDYQADVRVSDNILKQVAEVYRKIRNT----------FRFLLGNLADFNPTTDAVAV 670


>gi|256957334|ref|ZP_05561505.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|257077670|ref|ZP_05572031.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257421052|ref|ZP_05598042.1| leucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294779827|ref|ZP_06745213.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307270140|ref|ZP_07551457.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|256947830|gb|EEU64462.1| leucyl-tRNA synthetase [Enterococcus faecalis DS5]
 gi|256985700|gb|EEU73002.1| leucyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|257162876|gb|EEU92836.1| leucyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|294453101|gb|EFG21517.1| leucine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|295113985|emb|CBL32622.1| leucyl-tRNA synthetase [Enterococcus sp. 7L76]
 gi|306513509|gb|EFM82124.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|315035310|gb|EFT47242.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0027]
 gi|329577672|gb|EGG59101.1| leucine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 804

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 583 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 636 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 693


>gi|168205783|ref|ZP_02631788.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|170662677|gb|EDT15360.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
          Length = 514

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG     +  D+L R  R    E  V +V         I+ +A++      IN +   +
Sbjct: 17  HIGRVSSWMAGDILARYHRAKGDE--VIFVSGSDCHGSPILNKAKE------INKSPEEL 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +K  ++FV+   +L   +     R T+   H  Q+  +I+++   G  YE   E  + 
Sbjct: 69  INKYHREFVRCFNKLGF-SFNIFTR-TDSEYHEKQVKNIIKSLYNKGFIYEKETEEFYC 125


>gi|167849131|ref|ZP_02474639.1| leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 321

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 62  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 113

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 114 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 169


>gi|254302880|ref|ZP_04970238.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323072|gb|EDK88322.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 636

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 17/128 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  DV+ R  +    +        +T +D+      + E  +     
Sbjct: 14  VNGDPHVGSAYTTIAADVINRYNKAMGMDTHF-----MTGLDEH---GQKVEQAAEQNGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEAN 149
                T K T  F      L         R T       + +++ ++      G  Y+  
Sbjct: 66  TPQAWTDKMTPNFKNMWAALEIKYDDF-IRTTEDRHKKAVKRILDMV---NAKGDIYKGE 121

Query: 150 NEIIFDTS 157
            E  +  S
Sbjct: 122 YEGKYCVS 129


>gi|110803560|ref|YP_699780.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|110684061|gb|ABG87431.1| methionine--tRNA ligase [Clostridium perfringens SM101]
          Length = 645

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +E    ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALGLELPKQVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L+         + A  +R  +L       I F    L   EI + K              
Sbjct: 312 LVNM-------FGADAVRYYLLR-----EIPFGSDGLFNNEIFIKKVNTDLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  +++ AL          + L    A++++  L   
Sbjct: 360 RTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLISR 419

Query: 375 STKNHD 380
           + K  D
Sbjct: 420 ANKYID 425


>gi|126179951|ref|YP_001047916.1| leucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|125862745|gb|ABN57934.1| leucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 925

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 11/122 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
              DLI  H   ++         E      +  G   L G KMS S GN   + + +E  
Sbjct: 565 SAKDLISNHLTFQLFHHRAIFPQELQPQGMVVFGMGLLNGAKMSSSKGNVFLLEDAVE-- 622

Query: 296 KFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVL 352
                 + A  +R+ ++ +   + +  D+  + ++     + + W   + +KG      +
Sbjct: 623 -----EFGADTVRMFLVGSAEPW-QDFDWRNELVSSTRKQIERFWNTVTEAKGATGAHDI 676

Query: 353 SA 354
            A
Sbjct: 677 DA 678



 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYVRNITDIDDKIIERARQEHPSI 90
           P      H+G+ R  IV DVL R  R    E    + +    T +       A  +  +I
Sbjct: 38  PYPSGAMHVGHGRTYIVPDVLARYQRMRGKEVLFPMAFHVTGTPVIGISKRIANGDTTTI 97

Query: 91  PINDAISIITSKNTQQFVKDTT 112
            +   +  +      +F+    
Sbjct: 98  GLYRDLYRVPQDILDRFIDPME 119


>gi|14521127|ref|NP_126602.1| isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
 gi|11135009|sp|Q9V072|SYI_PYRAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5458344|emb|CAB49833.1| ileS isoleucyl-tRNA synthetase [Pyrococcus abyssi GE5]
          Length = 1067

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E++E              R 
Sbjct: 598 AASIVAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVERAGR-------DTFRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + + +   +L+
Sbjct: 651 YMLWA--TNPWENLKFSWKGVEQVRRMLN 677


>gi|152979488|ref|YP_001345117.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
 gi|187645703|sp|A6VQD5|SYM_ACTSZ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|150841211|gb|ABR75182.1| methionyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
          Length = 685

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 18/134 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    AD  +  +NI++H G++ + G KMSKS G FI     L 
Sbjct: 290 HFIGKDIMYFHSLFWPAMLEGADLRKP-SNIFVH-GYVTVNGEKMSKSRGTFIQAATYL- 346

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +      +R      L    R + +D  ++   +      ++K     S + G 
Sbjct: 347 ------KHLDPECLRYYYAAKLSN--RIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGF 398

Query: 347 IDPAVLSALYNDLN 360
           I       L + L+
Sbjct: 399 IQKRFAGKLADKLD 412


>gi|329734417|gb|EGG70730.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU045]
          Length = 916

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKQTSDVYRKIRNT 651


>gi|315161879|gb|EFU05896.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0645]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|296157165|ref|ZP_06840001.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
 gi|295892501|gb|EFG72283.1| isoleucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|255971258|ref|ZP_05421844.1| leucyl-tRNA synthetase [Enterococcus faecalis T1]
 gi|255962276|gb|EET94752.1| leucyl-tRNA synthetase [Enterococcus faecalis T1]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|229548742|ref|ZP_04437467.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255973878|ref|ZP_05424464.1| leucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256617686|ref|ZP_05474532.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256761563|ref|ZP_05502143.1| leucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256959928|ref|ZP_05564099.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256964366|ref|ZP_05568537.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|257081058|ref|ZP_05575419.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|257083719|ref|ZP_05578080.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|257089228|ref|ZP_05583589.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257418403|ref|ZP_05595397.1| leucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|293383508|ref|ZP_06629419.1| leucine--tRNA ligase [Enterococcus faecalis R712]
 gi|293386666|ref|ZP_06631240.1| leucine--tRNA ligase [Enterococcus faecalis S613]
 gi|307271410|ref|ZP_07552684.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|307284366|ref|ZP_07564531.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|307289503|ref|ZP_07569449.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|312901661|ref|ZP_07760931.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|312905044|ref|ZP_07764169.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|312907126|ref|ZP_07766119.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312951828|ref|ZP_07770719.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|312979295|ref|ZP_07790993.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|229306135|gb|EEN72131.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
 gi|255966750|gb|EET97372.1| leucyl-tRNA synthetase [Enterococcus faecalis T2]
 gi|256597213|gb|EEU16389.1| leucyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256682814|gb|EEU22509.1| leucyl-tRNA synthetase [Enterococcus faecalis T3]
 gi|256950424|gb|EEU67056.1| leucyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|256954862|gb|EEU71494.1| leucyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|256989088|gb|EEU76390.1| leucyl-tRNA synthetase [Enterococcus faecalis E1Sol]
 gi|256991749|gb|EEU79051.1| leucyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256998040|gb|EEU84560.1| leucyl-tRNA synthetase [Enterococcus faecalis CH188]
 gi|257160231|gb|EEU90191.1| leucyl-tRNA synthetase [Enterococcus faecalis T11]
 gi|291079142|gb|EFE16506.1| leucine--tRNA ligase [Enterococcus faecalis R712]
 gi|291083883|gb|EFE20846.1| leucine--tRNA ligase [Enterococcus faecalis S613]
 gi|306499521|gb|EFM68892.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0109]
 gi|306503306|gb|EFM72558.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0860]
 gi|306511905|gb|EFM80901.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|310626903|gb|EFQ10186.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|310630231|gb|EFQ13514.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0102]
 gi|310631623|gb|EFQ14906.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0635]
 gi|311287889|gb|EFQ66445.1| leucyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|311291272|gb|EFQ69828.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0470]
 gi|315145192|gb|EFT89208.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2141]
 gi|315154255|gb|EFT98271.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0031]
 gi|315154872|gb|EFT98888.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0043]
 gi|315164608|gb|EFU08625.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1302]
 gi|315166992|gb|EFU11009.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1341]
 gi|315170867|gb|EFU14884.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|315576576|gb|EFU88767.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0630]
 gi|327534387|gb|AEA93221.1| leucine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|229014224|ref|ZP_04171345.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228747178|gb|EEL97060.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           Q+         +  I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QD------GVTVKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|167742102|ref|ZP_02414876.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 313

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166


>gi|161511098|ref|NP_771156.2| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 543

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 43/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     K V ++    +   K+I+ A+ E        
Sbjct: 44  PNGNPHIGHAYEAIATDTLARFARLDG--KDVFFLTGTDEHGLKMIQTAQNEGL------ 95

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
             S + ++N  +F     RL   +     R T   H      + + +  +G  Y      
Sbjct: 96  TPSALAARNAARFKAMDERLNV-SFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAG 154

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 155 WYSVRDEAYY 164


>gi|57866707|ref|YP_188341.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|81819412|sp|Q5HPZ9|SYI_STAEQ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57637365|gb|AAW54153.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
          Length = 916

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKQTSDVYRKIRNT 651


>gi|295675816|ref|YP_003604340.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295435659|gb|ADG14829.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 711

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT   +++
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSVID 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNSTMEDLD 387


>gi|256854338|ref|ZP_05559702.1| leucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|256709898|gb|EEU24942.1| leucyl-tRNA synthetase [Enterococcus faecalis T8]
 gi|323479993|gb|ADX79432.1| leucyl-tRNA synthetase [Enterococcus faecalis 62]
          Length = 804

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 583 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 636 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 693


>gi|196034490|ref|ZP_03101899.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228948172|ref|ZP_04110456.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|195993032|gb|EDX56991.1| valyl-tRNA synthetase [Bacillus cereus W]
 gi|228811530|gb|EEM57867.1| Valyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
          Length = 881

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 61/162 (37%), Gaps = 12/162 (7%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
           + A  +R  +       + + F+++++      ++K    S 
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR 585


>gi|85101721|ref|XP_961203.1| leucyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|135142|sp|P15181|SYLM_NEUCR RecName: Full=Leucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS; Flags: Precursor
 gi|168830|gb|AAA33599.1| leucyl-tRNA synthetase [Neurospora crassa]
 gi|11595633|emb|CAC18253.1| leucine--tRNA ligase precursor, mitochondrial [Neurospora crassa]
 gi|28922744|gb|EAA31967.1| leucyl-tRNA synthetase [Neurospora crassa OR74A]
          Length = 994

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 43/159 (27%), Gaps = 16/159 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R       +  +       D      E A  E    P 
Sbjct: 93  PYPSGHLHLGHLRVYTIADVIARFQTLQGHKVLLPMGW---DAFGLPAENAAIERGINPA 149

Query: 93  NDAISIITSKNTQQFVKDTTR---LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
               + I     Q             C   T  P    H  ++      +   G AY+A 
Sbjct: 150 TWTKANIAKMKEQLGH--MNGSWDWNCELATCDPDFYKHTQKIF---LALHEKGLAYQAE 204

Query: 150 NEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
            E+              +  ++D      R   +  K+ 
Sbjct: 205 AEVNYDPVDKT----VLANEQVDANGCSWRSGARVEKRK 239


>gi|313893992|ref|ZP_07827558.1| Anticodon-binding domain protein [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313441556|gb|EFR59982.1| Anticodon-binding domain protein [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 357

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          ++  H   ++ EGRKMSKS GN +  +++++        + A V+RL +
Sbjct: 4   AVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDV-------YGADVMRLWV 56

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   + +   +  K   T           L    +D N
Sbjct: 57  SSADYQADVRLSKDIVKQLSEVYRKIRNTFR--------FLLGNLDDFN 97


>gi|269958908|ref|YP_003328697.1| leucyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848739|gb|ACZ49383.1| leucyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 829

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 45/129 (34%), Gaps = 29/129 (22%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  + ++       + + A  +RL ML  T     I+++   +  A   L
Sbjct: 593 EKMSKSKKNVVDPSHII-------KKYGADTVRLFMLSDTPPERDIEWSDVGVEGAWRYL 645

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHD------L 381
            +  +       I          D +T          +  +HKL R  + + +       
Sbjct: 646 ERLWRLFEDNSSIGA--------DFDTADVKAEDRVYLSGIHKLLRGLSADMEHCRLNCA 697

Query: 382 LPIFNASAH 390
           +  F   ++
Sbjct: 698 VAKFREMSN 706



 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 49/147 (33%), Gaps = 19/147 (12%)

Query: 17  EFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           +F+      I  YV G   Y     H+G+ R   + DV+ R  R +  +           
Sbjct: 22  DFKIAGNDGINCYVLGMFPYPSGNIHMGHIRNYAIGDVIARYKRAHGLK----------- 70

Query: 75  IDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
           +   I   A     E+ ++      ++ T +N +   K    +       +  AT     
Sbjct: 71  VLHPIGWDAFGLPAENAALSYGVNPAVWTERNIESMRKQLKSIGISYNWDREIATCKEDY 130

Query: 132 M---IYLIQNIILHGHAYEANNEIIFD 155
                    + + HG AY   + + +D
Sbjct: 131 YKHEQAFFLDFLQHGLAYRKESWVNWD 157


>gi|241663923|ref|YP_002982283.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865950|gb|ACS63611.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 959

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I   E+            A +IRL +  T Y   +  + + 
Sbjct: 623 HGFTVDGEGRKMSKSIGNTIAPQEI-------ANKMGAEIIRLWVASTDYSGELAISDEI 675

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 676 LKRVVEGYRRIRNT 689


>gi|229546656|ref|ZP_04435381.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|307276217|ref|ZP_07557347.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|307296175|ref|ZP_07576005.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|229308223|gb|EEN74210.1| leucyl-tRNA synthetase [Enterococcus faecalis TX1322]
 gi|306496149|gb|EFM65729.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0411]
 gi|306507129|gb|EFM76269.1| leucyl-tRNA synthetase [Enterococcus faecalis TX2134]
 gi|315030502|gb|EFT42434.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4000]
 gi|315159956|gb|EFU03973.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0312]
          Length = 820

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|257387585|ref|YP_003177358.1| valyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169892|gb|ACV47651.1| valyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 908

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 20/129 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRY--------YYGEKCVTYVRNITDIDDKIIERAR 84
           PTV    H+G+     + D + R  R         +  +        +T+ +  I  +  
Sbjct: 65  PTVSGNLHMGHLYQFTLQDFVARYHRMADDTVYFPFGYDDNGIASERLTEREKGIRHQD- 123

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP------THQPRATNHIPQMIYLIQN 138
                    +    +      +F +D   LA          T +PR        +  I  
Sbjct: 124 --FERRVFQEKCREVCETYEAEFTEDVQSLAISVDWDNTYKTIEPRVQR--VSQLSFID- 178

Query: 139 IILHGHAYE 147
           +   G  Y 
Sbjct: 179 LYEKGREYR 187


>gi|195570957|ref|XP_002103470.1| GD20436 [Drosophila simulans]
 gi|194199397|gb|EDX12973.1| GD20436 [Drosophila simulans]
          Length = 582

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 23/129 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    +++H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 296 AAGLEPPGQLYVHSHW-TVDGQKMSKSKHNVV-------DPLQAAQQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT---VQRLTEAE------ILLSKWPQTSTSKGIIDPAV-LSALYNDLNT 361
              H     +++    QR+  +E       LLS+    S + G I P+     L + L +
Sbjct: 348 GVAH--SDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSTSAEHLADLLRS 405

Query: 362 VSAIQALHK 370
           + A + L  
Sbjct: 406 LDAAKRLQD 414



 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y E  V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLHGVPVA--K 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+ +  + F   +     +      R T   H   +    + +   GH Y A    
Sbjct: 87  YCDDISQRYREVFRSAS-----IQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYSG 141

Query: 153 IFDTS 157
            +  S
Sbjct: 142 WYCVS 146


>gi|195329048|ref|XP_002031223.1| GM25865 [Drosophila sechellia]
 gi|194120166|gb|EDW42209.1| GM25865 [Drosophila sechellia]
          Length = 582

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 53/129 (41%), Gaps = 23/129 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    +++H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 296 AAGLEPPGQLYVHSHW-TVDGQKMSKSKHNVV-------DPLKAAQQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT---VQRLTEAE------ILLSKWPQTSTSKGIIDPAV-LSALYNDLNT 361
              H     +++    QR+  +E       LLS+    S + G I P+     L + L +
Sbjct: 348 GVAH--SDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYPSTSAEHLADLLRS 405

Query: 362 VSAIQALHK 370
           + A + L  
Sbjct: 406 LDAAKRLQD 414



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y E  V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLCTGTDEHGTKIQQAASLHGVPVA--K 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+ +  + F   +     +      R T   H   +    + +   GH Y A    
Sbjct: 87  YCDDISQRYREVFSSAS-----IQQDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYSG 141

Query: 153 IFDTS 157
            +  S
Sbjct: 142 WYCVS 146


>gi|222100204|ref|YP_002534772.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
 gi|254782448|sp|B9K8X3|SYI_THENN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|221572594|gb|ACM23406.1| Isoleucyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
          Length = 918

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 13/112 (11%)

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           GRKMSKS GN +   E++E        + A ++RL +  + Y   I  +++ + +   + 
Sbjct: 591 GRKMSKSLGNVVDPMEVVE-------KYGAEILRLWLASSDYFNDIKISMRIVEQQTEVY 643

Query: 335 SKWPQT----STSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
            K   T      +    DP +    Y  L T+   A+  L ++ + +T+ +D
Sbjct: 644 KKIRNTFRFLLGNLEDFDPELDRVPYEKLLTIDKWALGRLQEIIKRATEYYD 695


>gi|104783646|ref|YP_610144.1| isoleucyl-tRNA synthetase [Pseudomonas entomophila L48]
 gi|123255261|sp|Q1I4S5|SYI_PSEE4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|95112633|emb|CAK17361.1| isoleucyl-tRNA synthetase [Pseudomonas entomophila L48]
          Length = 943

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++ +T         A ++RL + 
Sbjct: 584 CAIDGHAPYRELLTHGFTVDENGRKMSKSLGNTIEPQKVNDTLG-------ADILRLWVS 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   +  + Q L  +     +   T+ 
Sbjct: 637 ATDYSGEMAVSEQILQRSADAYRRIRNTAR 666


>gi|75391303|sp|Q846V6|SYI_STAEP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|29123080|gb|AAO65848.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis]
          Length = 871

 Score = 42.5 bits (99), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSVAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQIDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLSDVRISDEILKKTSDVYRKIRNT 651


>gi|322377417|ref|ZP_08051908.1| isoleucine--tRNA ligase [Streptococcus sp. M334]
 gi|321281617|gb|EFX58626.1| isoleucine--tRNA ligase [Streptococcus sp. M334]
          Length = 930

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAEDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  N + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|318042707|ref|ZP_07974663.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 977

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    L+E  K   +   + A V+RL
Sbjct: 609 SVAVNGHAPYKRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGKNEKQEPAYGADVLRL 668

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      + +   +  K   T+ 
Sbjct: 669 WVSSVDYSADVPLGPGIVKQLADVYRKVRNTAR 701


>gi|313884631|ref|ZP_07818389.1| leucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620141|gb|EFR31572.1| leucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 807

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 53/138 (38%), Gaps = 15/138 (10%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E    ++     L     KMSKS GN +  ++++       + + A  +R   M M   
Sbjct: 559 KEPFQRLYNQGMILGSNNEKMSKSKGNVVNPDDVV-------KEYGADTLRVYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYNDLNTVSAIQALHKLARE 374
              I ++   L  +   L +  +    +  G +  +V  +  + L      +  H+  ++
Sbjct: 612 DASIAWSENGLEGSRRFLDRVWRLLVDEETGQLKASVQDSDDDALT-----KVYHQTVKK 666

Query: 375 STKNHDLLPIFNASAHIL 392
            T++ + L    A + ++
Sbjct: 667 VTEDLENLHFNTAISQLM 684


>gi|297538808|ref|YP_003674577.1| methionyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297258155|gb|ADI30000.1| methionyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 686

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 68/201 (33%), Gaps = 28/201 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K   I+ H GFL + G KMSKS G FIT    LE
Sbjct: 292 HFIGKDILYFHALFWPATLE-FSGHRKPTQIFAH-GFLTVNGEKMSKSRGTFITARSYLE 349

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------G 345
             K          +R       Y   I+ T++ +    + L  +     S          
Sbjct: 350 HIK------NPEYLRYY-----YAAKINSTMEDID---LSLDDFVARVNSDLVGKYINIA 395

Query: 346 IIDPAVLSALYN-DLN-TVSAI--QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
                 ++  ++  LN T + I    +   A    ++++      A   I+ +       
Sbjct: 396 SRTAGFINKRFDGKLNPTANNIVVAEIKASAHAIAESYEAREYGKALREIMRLADIANGF 455

Query: 402 NKNISIAIEKLVQERLILLKM 422
             + +  +    + +   L+ 
Sbjct: 456 VADKAPWVIAKQEGQDEALQQ 476


>gi|258511798|ref|YP_003185232.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257478524|gb|ACV58843.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 881

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
                    + +H    + +G+KMSKS GN I   ++++        + A  +R  +   
Sbjct: 504 FTGKMPFQTVLLHGLLRDAKGQKMSKSKGNGIDPMDVID-------KYGADALRFMLASN 556

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T     + F+ +++  A   L+K    + 
Sbjct: 557 TVLGNDLRFSWEKVEGARNFLNKLWNAAR 585


>gi|218291061|ref|ZP_03495093.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239015|gb|EED06221.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 650

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 53/175 (30%), Gaps = 21/175 (12%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H                       +GF  ++G KMSKS GN I    L
Sbjct: 257 DVHVVGKDIVRFHAVYWPIILMAL--GLPLPKKVFGHGFFLVKGGKMSKSKGNVIDPLSL 314

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           ++        +     R  +L       I F        E ++ +      +        
Sbjct: 315 VDR-------YGRDAFRYFLLR-----EIPFGQDGTFTPEGMVERLNYDLANDFGNLVHR 362

Query: 352 LSALYNDLN-----TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +A+ N  N     T  ++  + +  RE     +       +   L   V    L
Sbjct: 363 TAAMLNRFNDGVVPTPGSLTDVDRALREL--AAEAKAKVEENMDQLQFSVALAEL 415



 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 15/137 (10%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y  D  HIG+A   +  D + R  R    +  V ++    +   KI +R
Sbjct: 2   KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYD--VFFLTGTDEHGLKIQQR 59

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDT-TRLACLAPTHQPRATNHIPQ-MIYLI-QNI 139
           A Q                     +++D   +L         R T    + ++  I + +
Sbjct: 60  AEQAGLEPKAFLDP-------IIAWIQDLWRKLDISYDDF-IRTTELRHERVVEQIFERL 111

Query: 140 ILHGHAYEANNEIIFDT 156
           +  G  Y +  +  + T
Sbjct: 112 LQQGDIYLSEYQGWYCT 128


>gi|169343256|ref|ZP_02864267.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|182624314|ref|ZP_02952099.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|169298554|gb|EDS80635.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|177910532|gb|EDT72905.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 645

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +E    ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALGLELPKQVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L+         + A  +R  +L       I F    L   EI + K              
Sbjct: 312 LVNM-------FGADAVRYYLLR-----EIPFGSDGLFNNEIFIKKVNTDLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  +++ AL          + L    A++++  L   
Sbjct: 360 RTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLISR 419

Query: 375 STKNHD 380
           + K  D
Sbjct: 420 ANKYID 425


>gi|167914393|ref|ZP_02501484.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 326

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166


>gi|295706354|ref|YP_003599429.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804013|gb|ADF41079.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 921

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 20/119 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 SVAVTGEAPYKGVLSHGFALDGEGRKMSKSLGNVVIPEKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLN-TVSAIQA 367
               Y+  +  +   L +   +  K   T              L N  D N T  A+  
Sbjct: 622 ASVDYQADVRVSDNILKQVAEVYRKIRNT----------FRFLLGNLADFNPTTDAVAV 670


>gi|260568476|ref|ZP_05838945.1| isoleucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
 gi|260155141|gb|EEW90222.1| isoleucyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|254719936|ref|ZP_05181747.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|265984944|ref|ZP_06097679.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306838525|ref|ZP_07471363.1| isoleucyl-tRNA synthetase [Brucella sp. NF 2653]
 gi|264663536|gb|EEZ33797.1| isoleucyl-tRNA synthetase [Brucella sp. 83/13]
 gi|306406392|gb|EFM62633.1| isoleucyl-tRNA synthetase [Brucella sp. NF 2653]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|254715125|ref|ZP_05176936.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|261216834|ref|ZP_05931115.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
 gi|260921923|gb|EEX88491.1| isoleucyl-tRNA synthetase [Brucella ceti M13/05/1]
          Length = 950

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|254702616|ref|ZP_05164444.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261753200|ref|ZP_05996909.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
 gi|261742953|gb|EEY30879.1| isoleucyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|225686056|ref|YP_002734028.1| isoleucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|256262823|ref|ZP_05465355.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|225642161|gb|ACO02074.1| isoleucyl-tRNA synthetase [Brucella melitensis ATCC 23457]
 gi|263092644|gb|EEZ16865.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
 gi|326410380|gb|ADZ67444.1| isoleucyl-tRNA synthetase [Brucella melitensis M28]
 gi|326553673|gb|ADZ88312.1| isoleucyl-tRNA synthetase [Brucella melitensis M5-90]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|187929796|ref|YP_001900283.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|254782429|sp|B2UAQ4|SYI_RALPJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187726686|gb|ACD27851.1| isoleucyl-tRNA synthetase [Ralstonia pickettii 12J]
          Length = 959

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I   E+            A +IRL +  T Y   +  + + 
Sbjct: 623 HGFTVDGEGRKMSKSIGNTIAPQEI-------ANKMGAEIIRLWVASTDYSGELAISDEI 675

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 676 LKRVVEGYRRIRNT 689


>gi|222480795|ref|YP_002567032.1| lysyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222453697|gb|ACM57962.1| lysyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 567

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 62/175 (35%), Gaps = 34/175 (19%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +   +  L G  +S S GN +T++ELL+  +         V+R    + H ++  D  ++
Sbjct: 316 MVYEWFTLNGEPLSSSAGNIVTVSELLDLLE-------PAVLRYFFAL-HPKKARDLDIE 367

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
           RL +      ++ +     G +D         DL T  A +A   + R +       P+ 
Sbjct: 368 RLDQLVDRFDRFERAYF--GEVD-------DEDL-TAFAERAYPFVVRRADDPPTEKPVR 417

Query: 386 --NASAHILGIE---VCKEHL--------NKNISIAIEKLVQERLILLKMKKFSS 427
                A +LG+      +E L        +      +E  +           ++ 
Sbjct: 418 LPYTFAAVLGMVDDPAFRERLARDEGHIPDDASDETVEAALARVEKAR---NWAE 469


>gi|62317149|ref|YP_223002.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|83269132|ref|YP_418423.1| isoleucyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
 gi|189022408|ref|YP_001932149.1| isoleucyl-tRNA synthetase [Brucella abortus S19]
 gi|225628663|ref|ZP_03786697.1| isoleucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237816708|ref|ZP_04595700.1| isoleucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|254691368|ref|ZP_05154622.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|254698428|ref|ZP_05160256.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|254706253|ref|ZP_05168081.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|254711453|ref|ZP_05173264.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|254712056|ref|ZP_05173867.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|254731875|ref|ZP_05190453.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|256029916|ref|ZP_05443530.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|256158085|ref|ZP_05456003.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|256252960|ref|ZP_05458496.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|256256553|ref|ZP_05462089.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260166982|ref|ZP_05753793.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|260544382|ref|ZP_05820203.1| isoleucyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260756980|ref|ZP_05869328.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260759646|ref|ZP_05871994.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260762889|ref|ZP_05875221.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882791|ref|ZP_05894405.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|261220053|ref|ZP_05934334.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261313696|ref|ZP_05952893.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261319062|ref|ZP_05958259.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261319701|ref|ZP_05958898.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261756369|ref|ZP_06000078.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|265986934|ref|ZP_06099491.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|265996600|ref|ZP_06109157.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|297249909|ref|ZP_06933610.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
 gi|88942111|sp|P0C124|SYI_BRUA2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|90102026|sp|P0C123|SYI_BRUAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|62197342|gb|AAX75641.1| IleS, isoleucyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
 gi|82939406|emb|CAJ12360.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
           Ia:Isoleucyl-tRNA synthetase, class Ia [Brucella
           melitensis biovar Abortus 2308]
 gi|189020982|gb|ACD73703.1| isoleucyl-tRNA synthetase [Brucella abortus S19]
 gi|225616509|gb|EEH13557.1| isoleucyl-tRNA synthetase [Brucella ceti str. Cudo]
 gi|237787521|gb|EEP61737.1| isoleucyl-tRNA synthetase [Brucella abortus str. 2308 A]
 gi|260097653|gb|EEW81527.1| isoleucyl-tRNA synthetase [Brucella abortus NCTC 8038]
 gi|260669964|gb|EEX56904.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
 gi|260673310|gb|EEX60131.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677088|gb|EEX63909.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
 gi|260872319|gb|EEX79388.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
 gi|260918637|gb|EEX85290.1| isoleucyl-tRNA synthetase [Brucella ceti B1/94]
 gi|261292391|gb|EEX95887.1| isoleucyl-tRNA synthetase [Brucella ceti M644/93/1]
 gi|261298285|gb|EEY01782.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis B2/94]
 gi|261302722|gb|EEY06219.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
 gi|261736353|gb|EEY24349.1| isoleucyl-tRNA synthetase [Brucella sp. F5/99]
 gi|262550897|gb|EEZ07058.1| isoleucyl-tRNA synthetase [Brucella ceti M490/95/1]
 gi|264659131|gb|EEZ29392.1| isoleucyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
 gi|297173778|gb|EFH33142.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|23499963|ref|NP_699403.1| isoleucyl-tRNA synthetase [Brucella suis 1330]
 gi|81751628|sp|Q8FX81|SYI_BRUSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|23463543|gb|AAN33408.1| isoleucyl-tRNA synthetase [Brucella suis 1330]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|320100714|ref|YP_004176306.1| leucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
 gi|319753066|gb|ADV64824.1| leucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
          Length = 966

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 14/109 (12%)

Query: 13  RKITEFQ--AIDPSNIRMYVCGPTVYDFA--HIGNARPMIVFDVLYRLLRYYYGE--KCV 66
           R+   FQ   + P   + ++  P  Y  A  HIG+ R   + D++ R  R         +
Sbjct: 22  RESRVFQADPV-PGKPKYFITVPYPYSNAPLHIGHGRTYTMGDIVARYKRLKGFNVLYPM 80

Query: 67  TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
            +    T +       AR E   + +  +         + +V D +R+ 
Sbjct: 81  AFHITGTPVLAVSEMIARGEERVVNMYKS-------YIKYYVDDESRVN 122



 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 63/161 (39%), Gaps = 18/161 (11%)

Query: 243 PHHENE----IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           PH  N     I         E    +   N  +  EG KMSKS GN I + ++       
Sbjct: 610 PHISNHLSFYIIHHAVIFPREHWPRMITLNETVIREGAKMSKSKGNVIPLRDI------- 662

Query: 299 GRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
            R + A + RL +         +D+  + +      L +  + + +  +      + L +
Sbjct: 663 ARLYSADLFRLYISWAASLDSVLDWRERDVAVVADSLRRLVELAKT-ALSTECRNTGLDD 721

Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIF----NASAHILGI 394
            ++T   I   ++L + ++++ + + I     N+  ++L +
Sbjct: 722 PVSTW-FIDRFNQLVKAASESIEHMEIREYVQNSLFNVLSL 761


>gi|315452862|ref|YP_004073132.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315131914|emb|CBY82542.1| valyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 864

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL--A 310
                     +I++H    +  G KMSKS GN I   EL+       +++ +  +R   A
Sbjct: 504 ESLLGALPFKHIYLHALVRDENGEKMSKSKGNVIDPLELI-------KTYGSDALRFALA 556

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           ML    R  +    + L +A     K    +
Sbjct: 557 MLCVQGR-DLCLNPKVLEQARHFSHKLYNAA 586


>gi|296505474|ref|YP_003667174.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296326526|gb|ADH09454.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QEGL------TAKEIADQYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|294853217|ref|ZP_06793889.1| isoleucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
 gi|294818872|gb|EFG35872.1| isoleucyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|295677443|ref|YP_003605967.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
 gi|295437286|gb|ADG16456.1| isoleucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|256111897|ref|ZP_05452853.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|265993345|ref|ZP_06105902.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
 gi|262764215|gb|EEZ10247.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|256014987|ref|YP_003104996.1| isoleucyl-tRNA synthetase [Brucella microti CCM 4915]
 gi|255997647|gb|ACU49334.1| isoleucyl-tRNA synthetase [Brucella microti CCM 4915]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|228901151|ref|ZP_04065354.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
 gi|228858506|gb|EEN02963.1| Lysyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
          Length = 471

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 61/372 (16%), Positives = 108/372 (29%), Gaps = 61/372 (16%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R +I    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIITTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLAC----LAPT 120
             R +    D    +     P   I D     +       ++F K           +   
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIGVEFIYQH 127

Query: 121 HQPRATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGS--FSRR 168
            + R+  +   ++           I      G   E         T      G    +  
Sbjct: 128 DEYRSGRYNENILEALYKRKDIYNILMDFKTGECSEEERESFYPATLYCERCGKDTTTIT 187

Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
             DE     R   +   +     +    +  M+  W+  W      W IE          
Sbjct: 188 HFDEVLKTIRYECECGNEKELSVL---NTNKMKLNWKIDWPMR---WMIEEVVFEP---- 237

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFI 286
                  GG D         +++        + A  ++   F+ ++G   KMS S+GN I
Sbjct: 238 -------GGRDHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSGNSI 290

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQTSTS 343
           T +ELL       + +   VI        YR    F     + +        +   +  +
Sbjct: 291 TPSELL-------KVYLPEVILFMF--AKYRPNAAFHIGLDEDVIRNYTEYERLKDSYEN 341

Query: 344 KGIIDPAVLSAL 355
           K + +  +L A+
Sbjct: 342 KTLKNEDLLDAI 353


>gi|218290828|ref|ZP_03494897.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239186|gb|EED06387.1| valyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 881

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 36/89 (40%), Gaps = 8/89 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
                    + +H    + +G+KMSKS GN I   ++++        + A  +R  +   
Sbjct: 504 FTGKMPFQTVLLHGLLRDAKGQKMSKSKGNGIDPMDVID-------KYGADALRFMLASN 556

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T     + F+ +++  A   L+K    + 
Sbjct: 557 TVLGNDLRFSWEKVEGARNFLNKLWNAAR 585


>gi|239616581|ref|YP_002939903.1| leucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
 gi|239505412|gb|ACR78899.1| leucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
          Length = 791

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 31/184 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       +            E   +   H G +  +G KMSKS G
Sbjct: 519 PVDMYIGGNEHANLHLMYARFITMALHDLGILHFEEPFKSFRGH-GLIIKDGEKMSKSKG 577

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  N+  +T            +R   M M  + E  DF    +   +  L++ W   +
Sbjct: 578 NIVNPNDYFDTHGV-------DALRTYLMFMGSFLEGGDFRDSGMDAIKRFLNRVWEVAN 630

Query: 342 TSKGIIDPAVLSALYNDL------------NTVSAIQALHKLARESTKNHDL-LPIFNAS 388
             +G     +   +   +            NT  AI A+ +   E+ K   +   +    
Sbjct: 631 KPEGESSLQLKIKMAETIKKVEYSIENIKYNT--AIAAIMEFINEAVKEERIERQLVVDL 688

Query: 389 AHIL 392
           A +L
Sbjct: 689 AKLL 692


>gi|307822483|ref|ZP_07652714.1| leucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307736087|gb|EFO06933.1| leucyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 832

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +    L++        + A  +RL ++      + ++++ 
Sbjct: 580 LTQGMVLKDGSKMSKSKGNTVDPQGLID-------QYGADTVRLFIMFAAPPEQSLEWSD 632

Query: 325 QRLTEAEILLSKW 337
             +  A   L + 
Sbjct: 633 SGVEGAFRFLKRL 645


>gi|189083220|sp|A3CKP1|SYL_STRSV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 833

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 662 DRVYRLFNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 718 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 777

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 778 QIKGKVRAKLVVAKDLS-----REELQE--IALSDEK 807


>gi|187925133|ref|YP_001896775.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
 gi|254782379|sp|B2T6I7|SYI_BURPP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|187716327|gb|ACD17551.1| isoleucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|163844389|ref|YP_001622044.1| isoleucyl-tRNA synthetase [Brucella suis ATCC 23445]
 gi|163675112|gb|ABY39222.1| isoleucyl-tRNA synthetase [Brucella suis ATCC 23445]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|17989388|ref|NP_542021.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|256043121|ref|ZP_05446063.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|260564343|ref|ZP_05834828.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|265989553|ref|ZP_06102110.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
 gi|81850045|sp|Q8YB57|SYI_BRUME RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|17985262|gb|AAL54285.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|260151986|gb|EEW87079.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
 gi|263000222|gb|EEZ12912.1| isoleucyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|315221983|ref|ZP_07863894.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188949|gb|EFU22653.1| valyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 890

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|309781488|ref|ZP_07676224.1| isoleucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|308919901|gb|EFP65562.1| isoleucine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 959

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I   E+            A +IRL +  T Y   +  + + 
Sbjct: 623 HGFTVDGEGRKMSKSIGNTIAPQEI-------ANKMGAEIIRLWVASTDYSGELAISDEI 675

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 676 LKRVVEGYRRIRNT 689


>gi|260583475|ref|ZP_05851223.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260158101|gb|EEW93169.1| isoleucine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 929

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 50/119 (42%), Gaps = 14/119 (11%)

Query: 269 GFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           GF+   EG+KMSKS GN I+  + ++TK        A +IRL +    Y   +  +   L
Sbjct: 586 GFVMDGEGKKMSKSLGNVISPAKEMKTKG-------ADIIRLWVSSVDYESDVRISDDIL 638

Query: 328 TEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD 380
            +   +  K   T      +    DP   +  + DL TV    +   ++L     K +D
Sbjct: 639 NQVSEVYRKIRNTMRFMLANTTDFDPKAHAVAFEDLRTVDQYMLVRFNQLVDSIRKAYD 697


>gi|258405440|ref|YP_003198182.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
 gi|257797667|gb|ACV68604.1| arginyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
          Length = 551

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 49/317 (15%), Positives = 94/317 (29%), Gaps = 45/317 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   V D L R+LR         Y  N      +I+  +        +
Sbjct: 127 PT--GPLHIGHGRGAAVGDSLARILRRTGHTVTTEYYLNDAGRQMQILGASIAYRVLELL 184

Query: 93  NDAISIITSKNTQQFVKDTTRLAC------LAPTHQPRATNHIPQ-----MIYLIQNIIL 141
               +         +++D  +         L+    P    H  Q     ++  I+  + 
Sbjct: 185 GGPDTFPEDHYQGGYIRDLAQELVDTRGASLSAMDWPELLEHCRQHGLTRILEGIKRDLR 244

Query: 142 HGHAYEANNEIIFDTSSIPNYG-------SFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
               +   +++ F   S+ + G         + R +  ++ G          +  D +L 
Sbjct: 245 D---FRVEHQVWFSEQSLLDKGRVEATLTDLANRGLAYEQDGALWFASTTFGDDKDRVLR 301

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHY---LGKVFDIHGGGLDLIFPHHENEIAQ 251
           K    +   + S        +H      +  Y      V DI G       P  +  +  
Sbjct: 302 KSDGDL-TYFASDI-----AYH------ADKYARGFDTVVDIWGADHHGYVPRMKGAVQA 349

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
              A    +   + + N   + E   MS   G F T+ ++                R   
Sbjct: 350 LGRASEDLQVILVQLVNLLRDGEQVSMSTRAGKFETLADVCAEVG-------PDAARFIF 402

Query: 312 LMTHYREPIDFTVQRLT 328
           L       +DF ++ + 
Sbjct: 403 LSRKSDSHLDFDLELVK 419


>gi|255994058|ref|ZP_05427193.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993726|gb|EEU03815.1| valine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 897

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 8/88 (9%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT- 314
           D      N++IH    + +G+KMSKS GN I   ++++        + A  +R  +L   
Sbjct: 514 DGRLPFDNVYIHGLVRDKDGQKMSKSLGNGIDPLKIID-------EYGADALRFMLLTGI 566

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST 342
                I +  +++  A    +K    + 
Sbjct: 567 SAGSDIRYQEEKIIAARNFANKLWNAAR 594


>gi|254699492|ref|ZP_05161320.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261749947|ref|ZP_05993656.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
 gi|261739700|gb|EEY27626.1| isoleucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
          Length = 972

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|237751267|ref|ZP_04581747.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372633|gb|EEO23024.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 663

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS-IPIN 93
           V D  HIG+A   I+ DV+ +          V ++    +   KI E A++     I   
Sbjct: 12  VNDVPHIGHAYTTILADVMKKYWTLRG--NDVFFLTGTDEHGQKIEEAAKKHGIKTIEYA 69

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNE 151
           ++IS       +++  D             R T   HI  +    + +   G  Y+   E
Sbjct: 70  NSISEKFRDTWREYDIDY--------DKFIRTTYFEHILSVQKAFEIMYDRGDIYKGAYE 121

Query: 152 IIFDT 156
            ++  
Sbjct: 122 GMYCV 126


>gi|268590249|ref|ZP_06124470.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
 gi|291314533|gb|EFE54986.1| methionine--tRNA ligase [Providencia rettgeri DSM 1131]
          Length = 675

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 74/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    +   + T N+++H G++ + G KMSKS G FIT    L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGSQYRKPT-NLFVH-GYVTVNGAKMSKSRGTFITARSYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                     A  +R      L +  R + IDF ++   +      ++K     S + G 
Sbjct: 349 -------HLDADCLRYYYAAKLSS--RIDDIDFNLEDFVQRVNSDIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L  +L      Q     A+   ++++      A   I+ + ++   ++++  
Sbjct: 400 IAKRFDGKLSANLAEPELYQQFVDAAKVIGEDYNNREYNKAIREIMALADIANRYVDEKA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|162448397|ref|YP_001610764.1| hypothetical protein sce0127 [Sorangium cellulosum 'So ce 56']
 gi|161158979|emb|CAN90284.1| metG1 [Sorangium cellulosum 'So ce 56']
          Length = 696

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 46/140 (32%), Gaps = 13/140 (9%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           R YV  P  Y  D  H+G A   I  DVL R  R    E  +     +T  D+  ++  R
Sbjct: 4   RFYVTTPIYYINDVPHLGTAYTTIAADVLCRYHRLRGHESRM-----LTGTDEHGLKIQR 58

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILH 142
                     A      +    F     +L C AP    R +   H   +  L   I   
Sbjct: 59  AAEAR---GVAPGAHADEIAAVFRATWPKLGC-APDDFIRTSEPRHKKAVQELWSRIKAR 114

Query: 143 GHAYEANNEIIFDTSSIPNY 162
           G  Y  + E ++       Y
Sbjct: 115 GDIYLGHYEGLYCVGCEAYY 134


>gi|125717163|ref|YP_001034296.1| leucyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|125497080|gb|ABN43746.1| Leucyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 837

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 40/217 (18%), Positives = 68/217 (31%), Gaps = 64/217 (29%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 613 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 665

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 666 DRVYRLFNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 721

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 722 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 781

Query: 414 QE----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q     R  L+  K  S     R++L+     L D K
Sbjct: 782 QIKGKVRAKLVVAKDLS-----REELQE--IALSDEK 811


>gi|107023450|ref|YP_621777.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116690532|ref|YP_836155.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123071992|sp|Q1BUA1|SYI_BURCA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166200198|sp|A0K9T5|SYI_BURCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|105893639|gb|ABF76804.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116648621|gb|ABK09262.1| Isoleucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|78067313|ref|YP_370082.1| isoleucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123728930|sp|Q39DM8|SYI_BURS3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|77968058|gb|ABB09438.1| Isoleucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|68475681|ref|XP_718047.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
 gi|13591779|gb|AAK31350.1|AF352020_1 nuclear encoded mitochondrial leucyl-tRNA synthetase [Candida
           albicans]
 gi|46439795|gb|EAK99108.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
          Length = 924

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 44/156 (28%), Gaps = 24/156 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           HIG+ R   + DV+ R  R               ++   +   A     E+ ++  N   
Sbjct: 73  HIGHLRVYTISDVVARYKRSKGF-----------NVIHPMGWDAFGLPAENAAVERNINP 121

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI 152
           S  T  N  +               Q       P+     Q I       G AY    EI
Sbjct: 122 SEWTETNIAKMKNQMETF-LADFDWQREVNTSSPEYYKWTQKIFLMLFERGLAYRKAAEI 180

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                 +       +  ++D +    R      K+N
Sbjct: 181 NWDPVDNT----VLANEQVDAEGRSWRSGAIVEKRN 212


>gi|313200895|ref|YP_004039553.1| methionyl-tRNA synthetase [Methylovorus sp. MP688]
 gi|312440211|gb|ADQ84317.1| methionyl-tRNA synthetase [Methylovorus sp. MP688]
          Length = 696

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 29/153 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                +   I+ H GFL + G KMSKS G FIT    L+  K          +R      
Sbjct: 324 YSGHRQPTQIFAH-GFLTVNGEKMSKSRGTFITAGSYLQHVK------NPEYLRYY---- 372

Query: 315 HYREPIDFTVQ----RLTEAEILLSK------WPQTSTSKGIIDPAV---LSALYNDLNT 361
            Y   ++ +++     L +    ++           S + G I       L+AL ++   
Sbjct: 373 -YAAKLNGSMEDIDLNLDDFTARVNSDLVGKYINIASRTAGFISKRFDGKLAALVDN--- 428

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
            + I  L + A    + +++     A   I+ +
Sbjct: 429 -AVITELRQAASSIAECYNMRDYGRALREIMAL 460


>gi|307298046|ref|ZP_07577850.1| leucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916132|gb|EFN46515.1| leucyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 791

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 62/184 (33%), Gaps = 31/184 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       S            E   +   H G +  +G KMSKS G
Sbjct: 519 PVDMYIGGNEHATLHLMYSRFLSMALHDMGFLPFEEPFTSFRGH-GLIIKDGEKMSKSKG 577

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  NE  E+            +R   M M  + E  DF    +      L++ W   +
Sbjct: 578 NIVNPNEYFESHGV-------DTLRTYLMFMGTFLEGGDFRDSGMDAMRRFLNRVWDIAT 630

Query: 342 TSKGIIDPAVLSALYNDL------------NTVSAIQALHKLARESTKNHDL-LPIFNAS 388
             +G     +   +   +            NT  AI A+ +   E++K   +   +    
Sbjct: 631 MPEGRSSTELKIKMSETVEKVDYSVKNIKPNT--AIAAIMEFVNEASKEVSIERQLVIDM 688

Query: 389 AHIL 392
           A +L
Sbjct: 689 AKLL 692


>gi|228997294|ref|ZP_04156916.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|229004919|ref|ZP_04162646.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228756267|gb|EEM05585.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228762386|gb|EEM11311.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 1033

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A +           +      L+ +G+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGVDQTRGWFYSLLAVAALYTGKVPYKRVLSLGHVLDEQGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEILL 334
           S GN +   EL+E        + A  +R A+L     +     F+ + + EA+  L
Sbjct: 594 SKGNALDPVELVE-------KFGADALRWALLVDSAPWNAKR-FSERTVQEAKSKL 641


>gi|254440649|ref|ZP_05054142.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198250727|gb|EDY75042.1| isoleucyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 1008

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 21/163 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q C          +  H   L+ +G KMSKS GN I   +++       + + A ++RL 
Sbjct: 663 QGCGTIGRAPYRGVLTHGFTLDEKGMKMSKSIGNTIVPEKIV-------QQYGADILRLW 715

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--- 363
           +    +        + L        +   T      S G  D +      +         
Sbjct: 716 VAQVDFTNDQRIGDEILKGVADSYRRLRNTVRYMLGSLGDFDASKAVERDD---MPELEQ 772

Query: 364 ----AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                +  L  + R+    +D   +F A      +++   + +
Sbjct: 773 LILHKLAVLDGVVRKGYAKYDFQGVFRAIFDFATLDLSAFYFD 815


>gi|206561062|ref|YP_002231827.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|254782376|sp|B4E8Z7|SYI_BURCJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|198037104|emb|CAR53025.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|189184301|ref|YP_001938086.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189181072|dbj|BAG40852.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 854

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 10/58 (17%)

Query: 6  KIY--NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          KIY  N    K   F  +DP         PTV    HIG+A   I  D + R  R   
Sbjct: 25 KIYQWNPAISKKETFI-VDPPP-------PTVSGDLHIGHAMNFIQLDCIVRYQRMIG 74


>gi|170701657|ref|ZP_02892600.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170133446|gb|EDT01831.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 864

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|167906072|ref|ZP_02493277.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 329

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 62  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 113

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 114 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 169


>gi|167585706|ref|ZP_02378094.1| isoleucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|172059636|ref|YP_001807288.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|238689177|sp|B1YTA7|SYL_BURA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171992153|gb|ACB63072.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 864

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|73662887|ref|YP_301668.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|84029568|sp|Q49WX5|SYI_STAS1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|72495402|dbj|BAE18723.1| isoleucyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 916

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQEHPSIPIND 94
           H+G+A   I+ D++ R                   +  I+  + ++   R+E        
Sbjct: 64  HMGHALNKILKDIITRYKSMLGYYAPYVPGWDTHGLP-IEQALTKKGVKRKELSIAEFRK 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCEAFALEQIDNQKKDFKRLGVKGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGQSPYKMLLSHGFVMDGEGKKMSKSLGNVIVPDQIVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +    Y   +  + + L ++  +  K   T
Sbjct: 620 LWVSSVDYLADVRISDEILKQSSDVYRKIRNT 651


>gi|25009404|sp|Q9PFV8|SYM_XYLFA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|9105408|gb|AAF83359.1|AE003902_4 methionyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 702

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 16/103 (15%)

Query: 219 CSA-MSSHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-N 268
           CS       +G+ FD H         HH       N  A    A        A   +H N
Sbjct: 273 CSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPAVLHGTGHRAPTRLHVN 332

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           G+L ++G KMSKS G FI     L+             +R   
Sbjct: 333 GYLTVDGAKMSKSRGTFIMARTYLDA------GLEPDALRYYF 369


>gi|325956509|ref|YP_004291921.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333074|gb|ADZ06982.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|327183337|gb|AEA31784.1| isoleucyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 927

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 51/149 (34%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N++++          A +IRL +
Sbjct: 569 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMG-------AEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 622 AQADTTSDVAVSMGILQQSAEGYRKIRNTFRYMLANTSDFDPKENRVSYDDLRSVDQYME 681

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L ++    +D          +   
Sbjct: 682 VKLNDLVKDCLAAYDKFDFTTVFKKVFNF 710



 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 7/101 (6%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQ 85
           GP   +   H+G+A   I  D++ R                   +  ++ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLP-VEQQLAKKGVDRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
                   +       +  Q+ + D  RL  +A    P  T
Sbjct: 114 TMDRAKYRELCRQYAEEQIQKQMTDFKRLGVMADWDHPYIT 154


>gi|228991196|ref|ZP_04151154.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228768420|gb|EEM17025.1| Isoleucyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 1033

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A +           +      L+ +G+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGVDQTRGWFYSLLAVAALYTGKVPYKRVLSLGHVLDEQGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEILL 334
           S GN +   EL+E        + A  +R A+L     +     F+ + + EA+  L
Sbjct: 594 SKGNALDPVELVE-------KFGADALRWALLVDSAPWNAKR-FSERTVQEAKSKL 641


>gi|117619872|ref|YP_857738.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117561279|gb|ABK38227.1| leucyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 910

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 48/143 (33%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           IH+G       KMSKS  N I    ++E        + A  +RL M+      P    ++
Sbjct: 664 IHSGM-----TKMSKSKNNGIDPQLMVER-------YGADTVRLFMMFA---SPAEMTLE 708

Query: 322 FTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSAL------------------YND-- 358
           ++   +  A+  L +  + +    S G+     ++AL                   +D  
Sbjct: 709 WSDSGVEGAQRFLRRLWRITFEHVSAGVAPALNVAALSVDQKAVRRELHKTIAKVSDDVG 768

Query: 359 ----LNTVSAIQALHKLARESTK 377
                NT  AI A+ +L     K
Sbjct: 769 RRQTFNT--AIAAIMELMNNLAK 789


>gi|187477909|ref|YP_785933.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
 gi|123725187|sp|Q2L2K5|SYI_BORA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115422495|emb|CAJ49020.1| isoleucyl-tRNA synthetase [Bordetella avium 197N]
          Length = 953

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 34/88 (38%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ ++         A ++RL + 
Sbjct: 599 CMLYGQPPYKGLLTHGFVVDGQGRKMSKSVGNVIAPQKVSDSLG-------AEILRLWVA 651

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 652 STDYSGELSISDEILKRVVEGYRRIRNT 679


>gi|307207156|gb|EFN84946.1| Methionyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
          Length = 566

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 14/146 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    ++ D + R           T++   TD         + +  +         
Sbjct: 54  PHIGHLYSAVLADAIARYHAMLG---HRTFLITGTD-----EHGNKIKAAAAAAGLPNLE 105

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
             +K +QQF +   R      +   R T   H   + +  + +   GH Y       +  
Sbjct: 106 YCTKVSQQFRELCDRFEVDY-SRFIRTTEKQHCDAVHHFWKRLEERGHIYLGKYAGWYCV 164

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEK 182
           S   +    S  ++ EQK  T    K
Sbjct: 165 S---DEAFLSDAELVEQKDSTGETIK 187


>gi|299823062|ref|ZP_07054948.1| leucine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299816591|gb|EFI83829.1| leucine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 803

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 38/104 (36%), Gaps = 9/104 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++         + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGGNNEKMSKSRGNVVNPDDVVA-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDL 359
              I +    L  A   L + W    T  G I   + +   +DL
Sbjct: 609 EASIGWNDNGLEGARKFLDRVWRLFVTDTGEISDKITAEPNHDL 652


>gi|171319956|ref|ZP_02909031.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171094786|gb|EDT39825.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 864

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|197123221|ref|YP_002135172.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196173070|gb|ACG74043.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 832

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 17/130 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+AR   + D L R LR               D+   I   A     E+ +
Sbjct: 44  PYPSGAMHMGHARVYTIGDALARHLRMRGF-----------DVLHPIGFDALGLPAENAA 92

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAY 146
           I      +  T +N   F  +  RL       +   T    +     +    ++  G AY
Sbjct: 93  IKDGRHPAERTRENVVSFRAEMKRLGYSFDWDRELVTADASYYRWNQWFFLKMLEKGIAY 152

Query: 147 EANNEIIFDT 156
               ++ + T
Sbjct: 153 RRQGKVNWCT 162


>gi|124028274|ref|YP_001013594.1| isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
 gi|123978968|gb|ABM81249.1| Isoleucyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
          Length = 989

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 18/135 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYG---EKCVTYVRNIT---DIDDKIIERARQE 86
           PT   F H+G+AR   + DV  R +R       ++     + +    +++ K+  +++++
Sbjct: 52  PTTNGFMHVGHARGRTLKDVKLRYMRMRGYRVWDQAGWDTQGLPVELEVEKKLGLKSKRD 111

Query: 87  HPSIPIN---DAISIITSKNTQQFVKDTTRLACLAP------THQPRATNHIPQMIYLIQ 137
              + +    +    +     + +V+ + RL           T  PR   +I Q+   I+
Sbjct: 112 IEKLGVERFVEECRKLVDYYMEHWVRASKRLGLWLDYEHAYETRHPR---YIEQVWSFIK 168

Query: 138 NIILHGHAYEANNEI 152
                G  YE    +
Sbjct: 169 KAHEKGLLYEGRRVV 183


>gi|254247426|ref|ZP_04940747.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|124872202|gb|EAY63918.1| Isoleucyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|68475816|ref|XP_717981.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
 gi|46439720|gb|EAK99034.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
          Length = 924

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 44/156 (28%), Gaps = 24/156 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           HIG+ R   + DV+ R  R               ++   +   A     E+ ++  N   
Sbjct: 73  HIGHLRVYTISDVVARYKRSKGF-----------NVIHPMGWDAFGLPAENAAVERNINP 121

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI 152
           S  T  N  +               Q       P+     Q I       G AY    EI
Sbjct: 122 SEWTETNIAKMKNQMETF-LADFDWQREVNTSSPEYYKWTQKIFLMLFERGLAYRKAAEI 180

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                 +       +  ++D +    R      K+N
Sbjct: 181 NWDPVDNT----VLANEQVDAEGRSWRSGAIVEKRN 212


>gi|134296685|ref|YP_001120420.1| isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166200199|sp|A4JH32|SYI_BURVG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|134139842|gb|ABO55585.1| Isoleucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|229076419|ref|ZP_04209383.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228706706|gb|EEL58915.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|168209762|ref|ZP_02635387.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|168217641|ref|ZP_02643266.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|170712109|gb|EDT24291.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
           3626]
 gi|182380303|gb|EDT77782.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 645

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +E    ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALGLELPKQVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L+         + A  +R  +L       I F    L   EI + K              
Sbjct: 312 LVNM-------FGADAVRYYLLR-----EIPFGSDGLFNNEIFIKKVNTDLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  +++ AL          + L    A++++  L   
Sbjct: 360 RTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLISR 419

Query: 375 STKNHD 380
           + K  D
Sbjct: 420 ANKYID 425


>gi|126658904|ref|ZP_01730047.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126619854|gb|EAZ90580.1| isoleucyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 959

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 2/113 (1%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S   + I     +  H   L+ +G KMSKS GN +  N +
Sbjct: 565 DIYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFILDEKGYKMSKSLGNTVDPNVV 624

Query: 292 LETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   K   +   + A V+RL +    Y   +      L +   +  K   T+ 
Sbjct: 625 INGGKNQKQEPPYGADVLRLWVSSVDYSSDVPLGKTILKQLSDIYRKIRNTAR 677


>gi|110801166|ref|YP_697211.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|110675813|gb|ABG84800.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
          Length = 645

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +E    ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALGLELPKQVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L+         + A  +R  +L       I F    L   EI + K              
Sbjct: 312 LVNM-------FGADAVRYYLLR-----EIPFGSDGLFNNEIFIKKVNTDLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  +++ AL          + L    A++++  L   
Sbjct: 360 RTIAMVYKYFDGVIQAPTCKEAIDDELINLALSTPGKVEASIDALKIPEALESIWTLISR 419

Query: 375 STKNHD 380
           + K  D
Sbjct: 420 ANKYID 425


>gi|325276215|ref|ZP_08142014.1| leucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324098644|gb|EGB96691.1| leucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 868

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 38/143 (26%), Gaps = 15/143 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
               P     Y      Y     H+G+ R   + DV+ R  R     K V          
Sbjct: 26  VTEQPGKDTYYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      +  N A +  T +N +        L  LA       T   P      
Sbjct: 84  MPAENAA------MKNNVAPAKWTYENIEYMKTQLKSLG-LAIDWAREVTTCKPDYYRWE 136

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     +   G  Y  N  + +D
Sbjct: 137 QWLFTRLFEKGIIYRKNGTVNWD 159



 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 59/152 (38%), Gaps = 21/152 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++        + A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQSMID-------QYGADTCRLFMMFA---SPPDASLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +  Q   ++G+     ++AL +    +   +A+H   ++++ +      FN A
Sbjct: 676 RFLRRVWRLAQAHVAQGLPGKLDVAALDDAQKVIR--RAIHAAIKQASTDVGQFHKFNTA 733

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            A ++ +    E   +  +     L+ E L  
Sbjct: 734 IAQVMTVMNVLEKAPQATAQD-RALLHEGLEA 764


>gi|323489509|ref|ZP_08094736.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396640|gb|EGA89459.1| isoleucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 920

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I  H   L+  GRKMSKS GN I  ++++           A ++RL +
Sbjct: 568 SVAINGHAPYKGILSHGFTLDGNGRKMSKSLGNVIVPSKVMNQMG-------ADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   +  + +   +   +  K   T
Sbjct: 621 ASVDYTADVRVSDENFKQVSEVYRKIRNT 649


>gi|289193278|ref|YP_003459219.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939728|gb|ADC70483.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 566

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  I+ D L R+L +Y  +    Y  N
Sbjct: 126 PNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162


>gi|227514511|ref|ZP_03944560.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087068|gb|EEI22380.1| valine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 884

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W +   +   W S   W     GW    +     Y      +   G D+IF   
Sbjct: 439 PADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLV--TGYDIIFFWV 496

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++E        +   
Sbjct: 497 SRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVE-------KYGVD 549

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+ +++  +   ++K    S 
Sbjct: 550 ALRWFLVTGSTPGQDIRFSYKKMDASWNFINKIWNASR 587


>gi|209517453|ref|ZP_03266294.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
 gi|209502107|gb|EEA02122.1| isoleucyl-tRNA synthetase [Burkholderia sp. H160]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|189083221|sp|A4VY58|SYL_STRSY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 833

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 23/121 (19%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDPAVLSALY--------------NDLNTVSAIQALHKLARESTKNHD 380
            +  +  T+K ++      AL                DL   +AI  L      + K   
Sbjct: 662 DRVYRLLTTKELV-AENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLMIFVNAANKEDK 720

Query: 381 L 381
           L
Sbjct: 721 L 721


>gi|253752723|ref|YP_003025864.1| leucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253754549|ref|YP_003027690.1| leucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253756482|ref|YP_003029622.1| leucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|189083219|sp|A4W4F3|SYL_STRS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251817012|emb|CAZ52661.1| leucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251818946|emb|CAZ56789.1| leucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251820795|emb|CAR47557.1| leucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|319759140|gb|ADV71082.1| leucyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 833

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 23/121 (19%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDPAVLSALY--------------NDLNTVSAIQALHKLARESTKNHD 380
            +  +  T+K ++      AL                DL   +AI  L      + K   
Sbjct: 662 DRVYRLLTTKELV-AENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLMIFVNAANKEDK 720

Query: 381 L 381
           L
Sbjct: 721 L 721


>gi|170733873|ref|YP_001765820.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254782375|sp|B1JXC3|SYI_BURCC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169817115|gb|ACA91698.1| isoleucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|84489000|ref|YP_447232.1| leucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372319|gb|ABC56589.1| LeuS [Methanosphaera stadtmanae DSM 3091]
          Length = 953

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 10/114 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
              DL+  H    +         +         G   LEG+KMS S GN I ++E ++  
Sbjct: 582 SAKDLVGNHLSFHMFHHAAIFPQKYWPKGITVFGMGLLEGQKMSSSKGNVILLSEAID-- 639

Query: 296 KFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
                 + A  +RL ++ +   + +  D+  + +   +  L    +       +
Sbjct: 640 -----KYGADTVRLFLMSSAEPW-QDFDWREKEVNGIQRRLEAIIEFPQKVESL 687



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 34/116 (29%), Gaps = 18/116 (15%)

Query: 18  FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F++   +  +MYV     Y     H+G+ R   V DV  R  R            ++T  
Sbjct: 19  FESNPDNREKMYVTVAFPYPSGAMHVGHGRTYTVPDVYARFKRMQGFNVLFPMAWHVTGA 78

Query: 76  DDKIIERARQEHPSIPIND----------------AISIITSKNTQQFVKDTTRLA 115
               I +  + H    ++                     I    + ++  D   + 
Sbjct: 79  PVVGIAKRIERHDKWTMDIYKNVHQVPEDELEKFVDPEYIVKYFSSEYHNDMVDMG 134


>gi|54026880|ref|YP_121122.1| methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
 gi|54018388|dbj|BAD59758.1| putative methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
          Length = 518

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D + R  R    +    +    TD         + +  +     
Sbjct: 17  PNGAPHIGHAYEYISADAIARFKRLDGYD---VFFMTGTD-----EHGQKMQQAAAAEGI 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
            +  + ++N+  F +    L         R T  +H    + + + ++ +G  Y  N   
Sbjct: 69  PVQDLAARNSDVFERLDKALDVSY-DRFIRTTDADHRAASVAIWERMLANGDIYLDNYAG 127

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 128 WYSVRDEAFY 137



 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 10/97 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +     +++H GFL  +G KMSKS GN +   EL
Sbjct: 261 DVHIIGKDITRFHTVYWPAFLMSA-GVPLPKRVFVH-GFLYNKGEKMSKSVGNVVDPLEL 318

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
           ++        +    +R  +L    Y +   ++   +
Sbjct: 319 VD-------EYGLDAVRFFLLREISYGQDGSYSHDAI 348


>gi|15921712|ref|NP_377381.1| glutamyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
 gi|30316179|sp|Q971D0|SYE_SULTO RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|15622499|dbj|BAB66490.1| 566aa long hypothetical glutamyl-tRNA synthetase [Sulfolobus
           tokodaii str. 7]
          Length = 566

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 40/115 (34%), Gaps = 25/115 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+GNAR  I   + Y+    Y GE    ++    D D K+ +  ++ +  I  
Sbjct: 105 PNPDGPIHLGNARAAI---ISYKYAEMYKGE----FILRFDDTDPKVKKPIKEAYDWI-- 155

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                           KD   L       + +A+  +     + + +I  G AY 
Sbjct: 156 ---------------RKDLKWLGIKW-DKEVKASERLEFYYSMAKELISKGFAYV 194


>gi|118579453|ref|YP_900703.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|118502163|gb|ABK98645.1| arginyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 563

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 51/354 (14%), Positives = 86/354 (24%), Gaps = 110/354 (31%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D + RLL          +  N  D   +I   A         
Sbjct: 132 PT--GPLHIGHGRGAAIGDTICRLLDAAGWNVTREFYYN--DAGQQITNLALSVQARCLG 187

Query: 93  NDAI--SIITSKNTQQFVKDTTRL-----ACLAPTHQPRAT---NHIPQMIYL------- 135
            D             ++++D            A      A     ++  +          
Sbjct: 188 IDTNDPRWPADGYQGEYIRDVAAAYLARETVDADDRHVTALGDPQNLDAIREFAVASLRR 247

Query: 136 -------------------------------IQNIILHGHAYEANNEIIFDTSSIPNYGS 164
                                          ++ ++  GH YE    +   T+   +   
Sbjct: 248 EQDLDLKAFGVHFDVFTLESSLYDDGRVDNVVRQLVEKGHTYEQEGALWLRTTEFGDDKD 307

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
              RK D           YH                   WE  + R              
Sbjct: 308 RVMRKSDGGYTYFVPDVAYHL----------------AKWERGFTRV------------- 338

Query: 225 HYLGKVFDIHGGGLDLIFPHH---ENEIAQSCCADRIEK--TANIWIHNGFLNL----EG 275
                   I+  G D    HH       A     DR          +H   + +    E 
Sbjct: 339 --------INEQGSD----HHSTITRVRAGLQALDRGIPQGWPEYVLH-QMVTVMRGGEE 385

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
            K+SK  G+++T+ +L++              R   +M      + F +    E
Sbjct: 386 VKISKRAGSYVTLRDLIDEVGR-------DATRFFFIMRKPDSQLVFDIDLAKE 432


>gi|330685460|gb|EGG97115.1| leucine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 804

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 57/178 (32%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVNSHG-------ADTLRLYEMFMGPLDAAIAWSDKGLDGSRRFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLS----ALY-----------NDLNTVS---AIQALHKLARESTKNHDL 381
              G +   ++     +L             D +T+    AI  L     +  K  ++
Sbjct: 636 KEDGSLSDKIVETNNKSLDKTYNQTVKKVTEDFDTLGFNTAISQLMVFINDCYKADEI 693


>gi|330826259|ref|YP_004389562.1| Isoleucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
 gi|329311631|gb|AEB86046.1| Isoleucyl-tRNA synthetase [Alicycliphilus denitrificans K601]
          Length = 951

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 54/167 (32%), Gaps = 27/167 (16%)

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA---- 250
           K +  +E  ++S    G   WH     M   + G   D  G   DL    H+        
Sbjct: 554 KSTDILEVWFDS----GSTFWH----VMRGTHAGMHHD-EGPEADLYLEGHDQHRGWFHS 604

Query: 251 ---QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
               +           +  H   ++ +G+KMSKS GN ++  ++            A +I
Sbjct: 605 SLLLASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVSPQQV-------SGKLGAEII 657

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
           RL    T Y   +    + L        +   T      +    DPA
Sbjct: 658 RLWCAATDYSGDLAIDDKILARVVDAYRRIRNTLRFLLANVSDFDPA 704


>gi|327459525|gb|EGF05871.1| leucine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327490726|gb|EGF22507.1| leucine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 858

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 634 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 686

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 687 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAHLMIFVNVANK 742

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 743 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 802

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 803 QIKGKVRA-KLVVTKDLSREELQE--IALSDEK 832


>gi|317131687|ref|YP_004091001.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469666|gb|ADU26270.1| isoleucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 925

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 7/111 (6%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S     +     +  H   ++ EGRKMSKS GN I   ++
Sbjct: 558 DIYLEGNDQYRGWFQSSLLTSIAWKGVAPYKMVITHGMVVDGEGRKMSKSLGNGIAPGDI 617

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +       + + A ++RL +  + Y+  +  +   L +   +  K   T+ 
Sbjct: 618 V-------KKFGADILRLWVASSDYQGDVRVSDNILKQLSEVYRKIRNTAR 661


>gi|167922294|ref|ZP_02509385.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 326

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166


>gi|21358483|ref|NP_650348.1| Methionyl-tRNA synthetase [Drosophila melanogaster]
 gi|75026854|sp|Q9VFL5|SYMM_DROME RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|17861592|gb|AAL39273.1| GH13807p [Drosophila melanogaster]
 gi|23171238|gb|AAF55037.2| Methionyl-tRNA synthetase [Drosophila melanogaster]
 gi|220945160|gb|ACL85123.1| Aats-met-PA [synthetic construct]
 gi|220954980|gb|ACL90033.1| Aats-met-PA [synthetic construct]
          Length = 582

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 39/125 (31%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y E+ V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLCTGTDEHGTKIQQAASLHGVPVA--K 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+ +  + F   +     +      R T   H   +    + +   GH Y A    
Sbjct: 87  YCDDISQRYREVFRSAS-----IQQDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYSG 141

Query: 153 IFDTS 157
            +  S
Sbjct: 142 WYCVS 146



 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 53/148 (35%), Gaps = 34/148 (22%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  +E    +++H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 296 AAGLEPPGQLYVHSHW-TVDGQKMSKSKHNVV-------DPLQAAQQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT---VQRLTEAE------ILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
              H     +++    QR+  +E       LLS+    S + G I P           + 
Sbjct: 348 GVAH--SDGNYSHVKAQRILNSELADTLGNLLSRASAKSLNPGQIYP-----------SP 394

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAH 390
           SA + L  L R       L       + 
Sbjct: 395 SA-EHLADLLRSLDVAKRLQDSLLQLSE 421


>gi|330446439|ref|ZP_08310091.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
 gi|328490630|dbj|GAA04588.1| methionyl-tRNA synthetase [Photobacterium leiognathi subsp.
           mandapamensis svers.1.1.]
          Length = 681

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                 +      +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 348 ------KHLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++           +    + +  +L         I  I    + 
Sbjct: 394 SRNAGFIAKRFDGKLSDNFVEPELYA---EFVAAADRIGELYESREYGRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 451 ANQYVDE 457


>gi|325914855|ref|ZP_08177190.1| Isoleucyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325538946|gb|EGD10607.1| Isoleucyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 926

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 42/109 (38%), Gaps = 12/109 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D+         H   ++  GRKMSKS+GN I   E+++T         A ++RL +  
Sbjct: 578 AMDKAAPYKQCLTHGFTVDEHGRKMSKSSGNGIEPQEIMKTLG-------ADILRLWIAS 630

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDP-AVLSALYN 357
             Y   +  + + L        +   T+     +    DP   L AL +
Sbjct: 631 ADYSNEMSLSQEILKRNADAYRRLRNTARFLLGNLHGFDPLQHLVALDD 679


>gi|324992208|gb|EGC24130.1| leucine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|327472938|gb|EGF18365.1| leucine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 858

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 634 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 686

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 687 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAHLMIFVNVANK 742

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 743 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 802

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 803 QIKGKVRA-KLVVTKDLSREELQE--IALSDEK 832


>gi|229105649|ref|ZP_04236282.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228677785|gb|EEL32029.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|282601236|ref|ZP_05981162.2| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569800|gb|EFB75335.1| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 676

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 46/159 (28%), Gaps = 46/159 (28%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-- 317
                   +G+L L+G KMSKS GN +               + A  +R  +L    R  
Sbjct: 291 PLPKHVYGHGWLLLDGGKMSKSKGNVV-------DPYLLAERYSADALRYFLL----RDF 339

Query: 318 ---EPIDFTVQRL---------TEAEILLSK------------WPQTSTSKGIIDP---- 349
                 +F+ + L          +   LLS+             P+   +    D     
Sbjct: 340 PFGSDGNFSNELLINRINMDLANDLGNLLSRTTAMADKYFGGTLPENQAAGPEDDALLEK 399

Query: 350 -----AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
                A   A        +A+  +  +   + K  D   
Sbjct: 400 AKGLRARYEADMEAYAFQNALADVFDVIDAANKYIDATA 438



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 41/129 (31%), Gaps = 14/129 (10%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+    +  D + R  R          V  +T  D+      + E  +       
Sbjct: 23  DKLHIGHTYCTVATDAMARYKRLQGYN-----VMFLTGTDEH---GQKIELKAKEAGVTP 74

Query: 97  SIITSKNTQ--QFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NN 150
                   +  + VKD  +L  ++     R T+  H+  +  + + +   G  Y+     
Sbjct: 75  QQFVDNIVEGPKGVKDLWKLMNISYDRFIRTTDDYHVGAIQKIFKKMYDKGDIYKGTYKG 134

Query: 151 EIIFDTSSI 159
           +      S 
Sbjct: 135 KYCTPCESF 143


>gi|254492552|ref|ZP_05105724.1| methionyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
 gi|224462444|gb|EEF78721.1| methionyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
          Length = 678

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+I+ H     A    A    +  N++ H GFL ++G+KMSKS G FI     L
Sbjct: 286 VHFIGKDIIYFHALFWPAMLEGA-GFRQPDNVYAH-GFLTVDGKKMSKSRGTFIKARTYL 343

Query: 293 ETKKFGGRSWPAPVIRLAM 311
           +             +R   
Sbjct: 344 D-------HLNPEYLRYYF 355


>gi|184154973|ref|YP_001843313.1| valyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
 gi|183226317|dbj|BAG26833.1| valyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 884

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W +   +   W S   W     GW    +     Y      +   G D+IF   
Sbjct: 439 PADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLV--TGYDIIFFWV 496

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++E        +   
Sbjct: 497 SRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVE-------KYGVD 549

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+ +++  +   ++K    S 
Sbjct: 550 ALRWFLVTGSTPGQDIRFSYKKMDASWNFINKIWNASR 587


>gi|167897728|ref|ZP_02485130.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 332

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 62  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 113

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 114 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 169


>gi|167580110|ref|ZP_02372984.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 945

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|15668412|ref|NP_247208.1| arginyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501049|sp|Q57689|SYR_METJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|1590971|gb|AAB98223.1| arginyl-tRNA synthetase (argS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 566

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  I+ D L R+L +Y  +    Y  N
Sbjct: 126 PNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162


>gi|299782988|gb|ADJ40986.1| Valine--tRNA ligase [Lactobacillus fermentum CECT 5716]
          Length = 886

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W +   +   W S   W     GW    +     Y      +   G D+IF   
Sbjct: 439 PADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLV--TGYDIIFFWV 496

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++E        +   
Sbjct: 497 SRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVE-------KYGVD 549

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+ +++  +   ++K    S 
Sbjct: 550 ALRWFLVTGSTPGQDIRFSYKKMDASWNFINKIWNASR 587


>gi|260663368|ref|ZP_05864259.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
 gi|260552220|gb|EEX25272.1| valyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
          Length = 884

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 59/158 (37%), Gaps = 12/158 (7%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W +   +   W S   W     GW    +     Y      +   G D+IF   
Sbjct: 439 PADAENWVQDKDVLDTWFSSALWPFSTMGWPNTDAEDFKRYFPTTTLV--TGYDIIFFWV 496

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I QS          N+ +H    + +GRKMSKS GN I   +++E        +   
Sbjct: 497 SRMIFQSLEFTGKAPFRNVLLHGLIRDEQGRKMSKSLGNGIDPMDVVE-------KYGVD 549

Query: 306 VIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
            +R  ++      + I F+ +++  +   ++K    S 
Sbjct: 550 ALRWFLVTGSTPGQDIRFSYKKMDASWNFINKIWNASR 587


>gi|251783405|ref|YP_002997710.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242392037|dbj|BAH82496.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|323128154|gb|ADX25451.1| leucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 833

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  T++ I+                     +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLVTTREIVAENSGALDKVYNETVKAVTEQIETM--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EDQL 721


>gi|256810399|ref|YP_003127768.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793599|gb|ACV24268.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 566

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  I+ D L R+L +Y  +    Y  N
Sbjct: 126 PNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162


>gi|229072522|ref|ZP_04205724.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228710498|gb|EEL62471.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 544

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRVKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|189183674|ref|YP_001937459.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
 gi|189180445|dbj|BAG40225.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
          Length = 511

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 57/161 (35%), Gaps = 13/161 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ DV  R +R    E     V  +T  D+      + E  +     
Sbjct: 14  VNDIPHIGHAYTSILADVYARFMRLLGKE-----VIFLTGTDEH---GQKVEKAASNAGV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      K    FVK +  L  L+     R T+  HI  +  L + +   G  Y      
Sbjct: 66  SPKEFVDKIASSFVKLSVDLN-LSNDDFIRTTDTKHIKAVQKLWKVLEQQGDIYLGKYCG 124

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +       + S S    D  K  T    ++ +++   F L
Sbjct: 125 WYAI-KDEAFYSESELTTD-GKAPTGAEVEWVEESSYFFAL 163


>gi|167819286|ref|ZP_02450966.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 328

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 62  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 113

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 114 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 169


>gi|170584765|ref|XP_001897164.1| bifunctional aminoacyl-tRNA synthetase [Brugia malayi]
 gi|158595450|gb|EDP34004.1| bifunctional aminoacyl-tRNA synthetase, putative [Brugia malayi]
          Length = 1572

 Score = 42.5 bits (99), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 39/115 (33%), Gaps = 27/115 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L +YY        +    D +      A++           
Sbjct: 244 GYLHIGHAKAAL-------LNQYYQQAFEGELIMRFDDTNP-----AKEN---------- 281

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
               +   Q  ++D   L    P      ++H   ++ + + ++  G AY  + +
Sbjct: 282 ----AHFEQVILEDLKMLEVK-PDRWTHTSDHFDLILEMCERLLQEGKAYVDDTD 331


>gi|317133508|ref|YP_004092822.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315471487|gb|ADU28091.1| methionyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 651

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 57/177 (32%), Gaps = 35/177 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H    +++  H     A        E        +G+L L G KMSKS GN +     
Sbjct: 254 DVHLMAKEIVRFHTIIWPAILMAL--GEPLPKRVFGHGWLLLGGDKMSKSKGNVV----- 306

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
                   + +    IR  +L       I F        E LL +      +        
Sbjct: 307 --DPVLLCKRYSVDAIRYFLLR-----EIPFGADSTFSTEALLGRINADLANDLGNLVSR 359

Query: 345 ----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
                     G++  A  S  ++D   + A+ A  + A+    + D     NA A I
Sbjct: 360 TVAMVEKYFGGVLPAAGESGPFDD--KLRALAA--ETAKAVEADMDAFQFSNALADI 412


>gi|284007101|emb|CBA72376.1| methionyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 675

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 44/185 (23%), Positives = 68/185 (36%), Gaps = 30/185 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  NI++H G++ + G KMSKS G FIT    L+
Sbjct: 291 HFIGKDIVYFHSLFWPAILE-GSGYRKPTNIFVH-GYITVNGAKMSKSRGTFITARAYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
                     A  +R      L +           R+ + ++ L  + Q   S  +    
Sbjct: 349 -------QLDADCLRYYYAAKLSS-----------RIDDIDLNLEDFVQRVNSDIVNKVV 390

Query: 351 VLSALYNDLNTVSAI-QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
            L+A          I +  H          +L   F A+A+ +G E C+   NK I   I
Sbjct: 391 NLAARN-----AGFINKRFHNKLSSRLAAPELYQQFIAAANKIGQEFCQREYNKAI-REI 444

Query: 410 EKLVQ 414
             L  
Sbjct: 445 MLLAD 449


>gi|261403793|ref|YP_003248017.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261370786|gb|ACX73535.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 566

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  I+ D L R+L +Y  +    Y  N
Sbjct: 126 PNGPLHIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162


>gi|198474470|ref|XP_001356702.2| GA17300 [Drosophila pseudoobscura pseudoobscura]
 gi|198138406|gb|EAL33767.2| GA17300 [Drosophila pseudoobscura pseudoobscura]
          Length = 1180

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 50/150 (33%), Gaps = 37/150 (24%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG L L   KMSKS+GNF
Sbjct: 666 PMDLRVSGKDLINNHLTFTLYNHAAIW--PKDDTKWPKGMRVNGHLLLNSAKMSKSDGNF 723

Query: 286 ITINELLETKKFGGRS-------------------WPAPVIRLAMLMTHYREPIDFTVQR 326
           +T+ + +E     G                       A ++RL          I++  + 
Sbjct: 724 LTLTDAVEKFSADGMRLCLADAGDSIEDANFVVSTADAGILRLFTF-------IEWVKEM 776

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
           L E +  L K      ++   D   LS L 
Sbjct: 777 L-ETKSTLRK----GAARTFNDQVFLSELN 801


>gi|167835732|ref|ZP_02462615.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|167464567|ref|ZP_02329656.1| isoleucyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 922

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 11/137 (8%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDKIIERAR 84
           GP  Y     HIG+A   ++ D + R       +        T+   I        +  R
Sbjct: 55  GP-PYANGDIHIGHALNKLLKDFIIRFKTMQGYDAPYVPGWDTHGLPIEQAIANSGKVDR 113

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           ++       +       K  ++  +   RL        P  T    +  + I L   ++ 
Sbjct: 114 KQMSVPEFREYCKEYAMKWVEKQKEQFIRLGVRGDWEHPYITLQPEYEAEQIRLFGKMVR 173

Query: 142 HGHAYEANNEIIFDTSS 158
            G+ Y+    + +  SS
Sbjct: 174 KGYIYKGLKPVYWSPSS 190


>gi|332710580|ref|ZP_08430525.1| leucyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332350635|gb|EGJ30230.1| leucyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 865

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 42/159 (26%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  +       V +              A      I  
Sbjct: 42  PYPSGNLHMGHVRNYTITDVIAR--KSRMQGYRVLHPMGWDAFGLPAENAA------IAR 93

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T +N  Q      RL  L+       T   P      Q         G AY+ 
Sbjct: 94  GIHPAKWTYQNISQMRSQLKRLG-LSYDWDCEVTTCSPDYYKWTQWIFLQFFNAGLAYQK 152

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D +    R   K  +K
Sbjct: 153 EAAVNWDPVDQT----VLANEQVDSEGRSWRSGAKVERK 187


>gi|325972146|ref|YP_004248337.1| Lysyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324027384|gb|ADY14143.1| Lysyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 524

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y C  G T     HIGN R +I  D++ R L+    +    Y  +  D+
Sbjct: 20 REKGEKEVYTCASGITPSGTVHIGNFREIISVDLVVRALKAKGKQVRFIYSWDDYDV 76


>gi|315148803|gb|EFT92819.1| valyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|315148307|gb|EFT92323.1| leucyl-tRNA synthetase [Enterococcus faecalis TX4244]
          Length = 820

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 539 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGMVPTKEPFQKLYNQGMILGENNEKMSKSRG 598

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 599 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 651

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 652 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 709


>gi|313127143|ref|YP_004037413.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293508|gb|ADQ67968.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 688

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/182 (13%), Positives = 55/182 (30%), Gaps = 25/182 (13%)

Query: 16  TEFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
            +F   +P+ +    CG P      HIG+ R  +  D+  R L+    E    +V     
Sbjct: 4   EDFPTENPAVV---TCGLPYANGDLHIGHLRTYVGGDIYSRALKRLGQE--TAFVSGSDM 58

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QPRATNHIPQMI 133
               +   A +E               ++ +++ +   +       +       +     
Sbjct: 59  HGTPVAVNAEKE------GVTPESFALRHHEKYKETFPKFEIEFDNYGHTHDETNTELTQ 112

Query: 134 YLIQNIILHGH--------AYEANNEIIFD---TSSIPNY-GSFSRRKIDEQKMGTRVPE 181
            L++ +   G+        AY+ + +             Y G  +R    ++  G  +  
Sbjct: 113 ELVRTLEDEGYVYKKQIPVAYDPDADQWLPDRYVEGTCPYCGEHARGDECDEGCGRHLEP 172

Query: 182 KY 183
             
Sbjct: 173 GE 174


>gi|224824629|ref|ZP_03697736.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603122|gb|EEG09298.1| isoleucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 927

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +G KMSKS GN +   ++ ++         A ++RL + 
Sbjct: 579 CATIGRAPYQQLLTHGFVVDGKGLKMSKSKGNVVAPQKVNDSLG-------ADILRLWVA 631

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 632 STDYSGELAISDEILKRVTESYRRLRNT 659


>gi|186475341|ref|YP_001856811.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|254782378|sp|B2JDY9|SYI_BURP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|184191800|gb|ACC69765.1| isoleucyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVSNRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTESYRRIRNT 678


>gi|169351198|ref|ZP_02868136.1| hypothetical protein CLOSPI_01977 [Clostridium spiroforme DSM 1552]
 gi|169292260|gb|EDS74393.1| hypothetical protein CLOSPI_01977 [Clostridium spiroforme DSM 1552]
          Length = 929

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 9/125 (7%)

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
           H  C  M         D++  G D       + +     A        +  H   L+ +G
Sbjct: 554 HTGC--MKERGYPYPVDLYFEGSDQYRGWFNSSLIIGTAAHGKAPYKTVLSHGFVLDGKG 611

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            KMSKS GN +   +L+         + A ++RL      Y++ +  + + + +      
Sbjct: 612 NKMSKSLGNTVDPIKLVN-------QYGADIVRLWATSVAYQQDVRISDEIMKQISENYR 664

Query: 336 KWPQT 340
           K   T
Sbjct: 665 KIRNT 669


>gi|167844652|ref|ZP_02470160.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|168010013|ref|XP_001757699.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162690975|gb|EDQ77339.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 366

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 22/52 (42%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
            +    N+   +   V  R        +++AD ++K+++  G+ + D  N  
Sbjct: 192 DKREAANVPKGVMDAVSRRRTARAQHDYATADALQKEIKQAGYKVIDAPNGG 243


>gi|148265162|ref|YP_001231868.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
 gi|189030266|sp|A5G677|SYL_GEOUR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146398662|gb|ABQ27295.1| leucyl-tRNA synthetase [Geobacter uraniireducens Rf4]
          Length = 824

 Score = 42.1 bits (98), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E   N+ +  G +  +G KMSKS GN +  N L++        + A   RL  +      
Sbjct: 564 EPFTNL-LTQGMVIKDGAKMSKSKGNVVDPNALID-------KYGADTARLFSLFAAPPE 615

Query: 318 EPIDFTVQRLTEAEILLSK 336
           + +D++ Q +  +   L++
Sbjct: 616 KDLDWSDQGVDGSFRFLNR 634


>gi|326388332|ref|ZP_08209928.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
 gi|326207064|gb|EGD57885.1| valyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM 19370]
          Length = 954

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 39/98 (39%), Gaps = 9/98 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E + + + +     D+   G D++F        Q     +      +++H      
Sbjct: 550 GWPDEDAPLLARHYPN--DLLVSGFDILFFWCARMAMQGLHFMKEVPWRRLYLHGLVRAA 607

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +G+KMSKS GN +    L++        + A  +R  M
Sbjct: 608 DGQKMSKSKGNVVDPLGLID-------KYGADALRFFM 638


>gi|260655495|ref|ZP_05860983.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260629943|gb|EEX48137.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 642

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 47/159 (29%), Gaps = 47/159 (29%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +     ++ H G+  +EG KMSKS GN +  +E++         +     R  +     
Sbjct: 277 GLTPPKQVFSH-GWWTVEGEKMSKSKGNAVNPHEMIGR-------YGRDAFRYFLF---- 324

Query: 317 REPI-----DFTVQRLT------------------------------EAEILLSKWPQTS 341
           R+       DF+ + L                                A        +  
Sbjct: 325 RQMPFGLDGDFSEEALAKQINSDLANDLGNLLSRTVTMAVKYQEGVVAAPQKREALDEEV 384

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
            + G        +L +      A++AL  L   + K  D
Sbjct: 385 AALGAKTAEEYRSLMDGYGFEDALKALWSLISRANKYID 423



 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 43/124 (34%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  DV+ R  R    +        +T  D+   +       +     
Sbjct: 14  VNDIPHIGHAYTTIAADVMARFKRMSGYDVFF-----LTGTDEHGQK---VAQAAAAKGV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +T   +++F +    +         R T   HI  +  + Q ++  G  Y+   + 
Sbjct: 66  DPQKLTDGLSEKFRELLPVIGASNDDF-IRTTQERHIKTVQAIFQKLLAQGDIYKGTYKG 124

Query: 153 IFDT 156
           ++  
Sbjct: 125 LYCV 128


>gi|254503294|ref|ZP_05115445.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222439365|gb|EEE46044.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 508

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 40/111 (36%), Gaps = 11/111 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I+ D+L R       E  ++     T +D+      + +  +  ++ 
Sbjct: 14  VNGSPHIGHAFTSIMADILKRNREALGYEMMLS-----TGVDEH---GQKNQEAAEALDM 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHG 143
            ++       ++F     ++      +  R +   H   +  + Q I   G
Sbjct: 66  PVTDYLDMRCKEFRDVFEKIGVE-FDYFVRTSREGHKTAVAEMEQRIFDKG 115



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 25/182 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++ PH          AD       + +H+ ++   G KMSKS GN +   E+++
Sbjct: 256 HMIGKDILKPHGVYWPLMLMAADLPLP-KKLSVHSHWVGAGGVKMSKSIGNVVDPIEVMD 314

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPID--FTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                        +R   L  H R   D   +V  +T+A        +     G +   V
Sbjct: 315 KLGV-------DALRWY-LARHMRADSDSQISVDLITQAYNS-----ELGNKIGNLLSRV 361

Query: 352 LSALYNDLN----TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
                 + +       A+ A  +  R       ++    A A  + ++       + +  
Sbjct: 362 AKFSNKNFDGKVPMPGALTAEDEALR-----RTVVEATKAFAGWINLQDIPAATQQIVEA 416

Query: 408 AI 409
           A+
Sbjct: 417 AV 418


>gi|195148056|ref|XP_002014990.1| GL19473 [Drosophila persimilis]
 gi|194106943|gb|EDW28986.1| GL19473 [Drosophila persimilis]
          Length = 1180

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 50/150 (33%), Gaps = 37/150 (24%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A         K       NG L L   KMSKS+GNF
Sbjct: 666 PMDLRVSGKDLINNHLTFTLYNHAAIW--PKDDTKWPKGMRVNGHLLLNSAKMSKSDGNF 723

Query: 286 ITINELLETKKFGGRS-------------------WPAPVIRLAMLMTHYREPIDFTVQR 326
           +T+ + +E     G                       A ++RL          I++  + 
Sbjct: 724 LTLTDAVEKFSADGMRLCLADAGDSIEDANFVVSTADAGILRLFTF-------IEWVKEM 776

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
           L E +  L K      ++   D   LS L 
Sbjct: 777 L-ETKSTLRK----GAARTFNDQVFLSELN 801


>gi|168213448|ref|ZP_02639073.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170715012|gb|EDT27194.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 645

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +E    ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALGLELPKQVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L+         + A  +R  +L       I F    L   EI + K              
Sbjct: 312 LVNM-------FGADAVRYYLLR-----EIPFGSDGLFNNEIFIKKVNTDLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  +++ AL          + L    A++++  L   
Sbjct: 360 RTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLISR 419

Query: 375 STKNHD 380
           + K  D
Sbjct: 420 ANKYID 425


>gi|126291145|ref|XP_001378526.1| PREDICTED: hypothetical protein [Monodelphis domestica]
          Length = 1178

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 53/160 (33%), Gaps = 49/160 (30%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DL+  H      N +A           A     NG L L   KMSKS GNF
Sbjct: 669 PVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPGAVR--ANGHLLLNSEKMSKSTGNF 726

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
           +T+ + ++        + A  +RL                 L +A   +           
Sbjct: 727 LTLTQAID-------KFSADGMRL----------------ALADAGDTVE---------- 753

Query: 346 IIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
             D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 754 --DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 786


>gi|123966181|ref|YP_001011262.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|123200547|gb|ABM72155.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 511

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 40/100 (40%), Gaps = 15/100 (15%)

Query: 219 CSAMSSHYLGKVF------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           C  MS   L          DIH  G D++  H     A    A  ++    ++ H GFL 
Sbjct: 235 CPNMSDPSLESSINNGWPADIHFIGKDILRFHAVYWPAMLLSA-GMDVPKRVFGH-GFLT 292

Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            EG+KM KS GN +  N LL         +    +R  +L
Sbjct: 293 REGQKMGKSLGNVLDPNLLLS-------KYGKEAVRWYLL 325


>gi|83720304|ref|YP_441326.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|167618175|ref|ZP_02386806.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
 gi|123767710|sp|Q2T0H3|SYI_BURTA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83654129|gb|ABC38192.1| isoleucyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|78065216|ref|YP_367985.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123729057|sp|Q39JM5|SYL_BURS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77965961|gb|ABB07341.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|12044871|ref|NP_072681.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|255660383|ref|ZP_05405792.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|1351165|sp|P47267|SYM_MYCGE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|3844630|gb|AAC71237.1| methionyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166079081|gb|ABY79699.1| methionyl-tRNA synthetase [synthetic Mycoplasma genitalium
           JCVI-1.0]
          Length = 512

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 11/134 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I+ DV+ R             +    +  +KI  +A+       +N     
Sbjct: 17  PHIGHAFTTILADVIKRF--KIQNGYEAFLLVGSDEHGNKIESKAKS------LNLDPKT 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHI--PQMIYLIQNIILHGHAYEANNEIIFDT 156
               N Q F      L   +  H  R T+ I   Q+    Q++      Y++  +  +  
Sbjct: 69  FVDINAQAFKLMWKTLNI-SFDHFIRTTDEIHKQQVQKTFQDLYDKKLIYQSEWKGAYCV 127

Query: 157 SSIPNYGSFSRRKI 170
               NY +F+++ +
Sbjct: 128 ECEQNYFTFNKQTM 141


>gi|115350603|ref|YP_772442.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122324034|sp|Q0BIB5|SYL_BURCM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115280591|gb|ABI86108.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|57505384|ref|ZP_00371312.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
 gi|57016209|gb|EAL52995.1| valyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
          Length = 870

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE ++T       + A ++R  
Sbjct: 501 QSTNALEELPFKHIYLHALVKDEQGRKMSKSLGNVIDPNESIKT-------YSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAVQGR-DIKLSEDKLLQVRNFTNKIYNATNYLLLNENKFED 597


>gi|291229909|ref|XP_002734913.1| PREDICTED: MGC82093 protein-like [Saccoglossus kowalevskii]
          Length = 1074

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 41/130 (31%), Gaps = 37/130 (28%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIE--KTANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DL+  H    +   C     E  K       NG L L   KMSK  GNF+T
Sbjct: 564 PVDLRVSGKDLVPNHLTYYMYNHCAIWPKEADKWPRSIRANGHLLLNSEKMSKQTGNFLT 623

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + E +         + A  +RL                 L +A   L             
Sbjct: 624 LYEAVGL-------FSADGMRL----------------ALADAGDTLE------------ 648

Query: 348 DPAVLSALYN 357
           D   + A+ +
Sbjct: 649 DANFVEAMAD 658


>gi|206561710|ref|YP_002232475.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|238693126|sp|B4EEW1|SYL_BURCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|198037752|emb|CAR53696.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|146321931|ref|YP_001201642.1| leucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145692737|gb|ABP93242.1| Leucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292559344|gb|ADE32345.1| Leucyl-tRNA synthetase [Streptococcus suis GZ1]
          Length = 839

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 23/121 (19%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 615 AKMSKSLKNVVNPDDVVE-------QFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 667

Query: 335 SKWPQTSTSKGIIDPAVLSALY--------------NDLNTVSAIQALHKLARESTKNHD 380
            +  +  T+K ++      AL                DL   +AI  L      + K   
Sbjct: 668 DRVYRLLTTKELV-AENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLMIFVNAANKEDK 726

Query: 381 L 381
           L
Sbjct: 727 L 727


>gi|146319735|ref|YP_001199447.1| leucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145690541|gb|ABP91047.1| Leucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
          Length = 839

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 23/121 (19%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 615 AKMSKSLKNVVNPDDVVE-------QFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 667

Query: 335 SKWPQTSTSKGIIDPAVLSALY--------------NDLNTVSAIQALHKLARESTKNHD 380
            +  +  T+K ++      AL                DL   +AI  L      + K   
Sbjct: 668 DRVYRLLTTKELV-AENSGALDKVYNETVKTVTEHIEDLKFNTAIAQLMIFVNAANKEDK 726

Query: 381 L 381
           L
Sbjct: 727 L 727


>gi|119713330|gb|ABL97394.1| leucine-tRNA synthetase [uncultured marine bacterium EB80_02D08]
          Length = 804

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 42/115 (36%), Gaps = 15/115 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                 +  E    + +  G +  +G KMSKS G
Sbjct: 510 PVDLYIGGIEHAILHLLYSRFFHKALRDMGLVEGNEPFKKL-LTQGMVLKDGAKMSKSKG 568

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKW 337
           N +     +E        + A  +RL M+      + ++++   +  A   + K 
Sbjct: 569 NTVDPQSYIE-------KYGADTVRLYMMFTAPPEQSLEWSESSVEGASRFMKKI 616


>gi|154249481|ref|YP_001410306.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
 gi|154153417|gb|ABS60649.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
          Length = 650

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 47/124 (37%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG++   I+ D+L R  R    E  V Y+    +   KI + AR++        
Sbjct: 13  VNAEPHIGSSYTTIIGDILARYKRLMGYE--VFYLTGTDEHGQKIAQAAREKGLE----- 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +     ++F +    L      +  R T+  H   + Y +  ++ +G  Y+   E 
Sbjct: 66  -PKELCDTLAEKFKELWKDLGITN-DYFIRTTDENHEKTVQYFVSKMMENGDIYKGIYEG 123

Query: 153 IFDT 156
            +  
Sbjct: 124 WYCV 127



 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI-- 320
            ++ H G+L + G+K+SKS GN I   E         R +   V+R  ++    R+ +  
Sbjct: 286 KVFAH-GWLTVNGQKISKSLGNAIDPRE-------YVRKYGNDVVRYYLV----RDIVFG 333

Query: 321 ---DFTVQRL 327
              DF+ + L
Sbjct: 334 KDGDFSEENL 343


>gi|170731974|ref|YP_001763921.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|254246337|ref|ZP_04939658.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|238688589|sp|B1JVG9|SYL_BURCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124871113|gb|EAY62829.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
 gi|169815216|gb|ACA89799.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|325696381|gb|EGD38272.1| valine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 883

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|322384104|ref|ZP_08057822.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151184|gb|EFX44493.1| isoleucyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 896

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 44/137 (32%), Gaps = 11/137 (8%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDKIIERAR 84
           GP  Y     HIG+A   ++ D + R       +        T+   I        +  R
Sbjct: 29  GP-PYANGDIHIGHALNKLLKDFIIRFKTMQGYDAPYVPGWDTHGLPIEQAIANSGKVDR 87

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           ++       +       K  ++  +   RL        P  T    +  + I L   ++ 
Sbjct: 88  KQMSVPEFREYCKEYAMKWVEKQKEQFIRLGVRGDWEHPYITLQPEYEAEQIRLFGKMVR 147

Query: 142 HGHAYEANNEIIFDTSS 158
            G+ Y+    + +  SS
Sbjct: 148 KGYIYKGLKPVYWSPSS 164


>gi|311107992|ref|YP_003980845.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310762681|gb|ADP18130.1| leucyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 885

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 17/138 (12%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + D++ R LR       +          D     
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------DAFGMP 91

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLIQ---- 137
           A  E+ +I      +  T  N     K    +         R      PQ     Q    
Sbjct: 92  A--ENAAIKSKVPPAKWTYDNIAYMKKQMKAMGL--AIDWSREMCACDPQYYKWNQWLFL 147

Query: 138 NIILHGHAYEANNEIIFD 155
            ++  G AY     + +D
Sbjct: 148 KMLEKGVAYRKTQVVNWD 165


>gi|307543906|ref|YP_003896385.1| isoleucyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307215930|emb|CBV41200.1| isoleucyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 1006

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 13/111 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D       +  H   ++ +GRK SKS GN +   ++++          A ++RL +  
Sbjct: 648 AIDGHPPYRQLLTHGFTVDEKGRKQSKSLGNVVAPQDVMDKLG-------ADILRLWVAS 700

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALY-NDL 359
           T Y   +  + Q L     +  +   TS     +    DP    AL  +D+
Sbjct: 701 TDYSGEMAVSDQILKRTADVYRRIRNTSRFLLANLNGFDPE-RDALAFDDM 750


>gi|303326810|ref|ZP_07357252.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
 gi|302862798|gb|EFL85730.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
          Length = 665

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D L R  +     +   ++    +  DKI++ A ++        
Sbjct: 13  VNANPHLGHAYTTIVADSLARFHKLLG--EDTLFLTGTDEHGDKIVQAAEKQ------GQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--N 150
                    + +F     +L   A     R T+  H   +   +Q +   G  Y      
Sbjct: 65  TPKEFVDDISGRFRALWPQLGI-ANDRFVRTTDEAHKRTVQDFLQKVYDAGDIYFGEFGG 123

Query: 151 EIIFDTSSI 159
              +     
Sbjct: 124 HYCYGCERF 132



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 50/146 (34%), Gaps = 39/146 (26%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTV 324
           +H  +L+ +  KMSKS GN +   + LET    GR +     R  +L   H+     F+ 
Sbjct: 285 VHGYWLSRD-TKMSKSLGNVV---DPLET----GRRFGLDAFRYFLLREMHFGSDASFSE 336

Query: 325 QRL-----TEAEILLSKW-------------------PQTSTSKGIIDPAVLSALYN--- 357
           + L      +    L                       Q       +     +A+ N   
Sbjct: 337 ESLIGRINADLANDLGNLFSRVLSMTAKYFGSCVPQPKQREPEDEAMVELCATAMRNFSQ 396

Query: 358 ---DLNTVSAIQALHKLARESTKNHD 380
              ++    A+++L +L R   K  D
Sbjct: 397 LFGNVQFAQALESLWELVRALNKYVD 422


>gi|295109883|emb|CBL23836.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Ruminococcus obeum A2-162]
          Length = 800

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 57/166 (34%), Gaps = 26/166 (15%)

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            F HH   +      +  E  A   I    L  +G KMSKS GN +   +++E       
Sbjct: 545 RFWHH--FLYDLGVVNTPEPYAKRSIQGLILGPDGDKMSKSKGNVVDPLDIVE------- 595

Query: 301 SWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDP------A 350
            + A  +R   + M  Y     ++   +   +  L +        + + + D        
Sbjct: 596 EYGADTLRTYVLFMGDYGAATPWSDSSVKGCKKFLDRVAGLTDILSEEPVSDELEMKIHR 655

Query: 351 VLSALYND-----LNTVSA--IQALHKLARESTKNHDLLPIFNASA 389
            +  + +D      NT  A  +  ++++  E     + L IF    
Sbjct: 656 TIKKVSSDIESLKFNTAIASLMTLINEITAEGHIGKEDLGIFIKLL 701


>gi|257083370|ref|ZP_05577731.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|256991400|gb|EEU78702.1| valyl-tRNA synthetase [Enterococcus faecalis Fly1]
 gi|315171826|gb|EFU15843.1| valyl-tRNA synthetase [Enterococcus faecalis TX1342]
 gi|327536084|gb|AEA94918.1| valine--tRNA ligase [Enterococcus faecalis OG1RF]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|242238544|ref|YP_002986725.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130601|gb|ACS84903.1| leucyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 860

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 49/153 (32%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             +     KMSKS  N I    ++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVYAGMSKMSKSKNNGIDPQVMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSK-WPQTS--TSKGIIDPAVLSALYND----------------------- 358
             +  A   L + W Q    T+KG   P  ++ L +D                       
Sbjct: 661 SGVEGANRFLKRVWKQVYDHTAKGSTQPLNIAELTDDQKALRRDLHKTIAKVTDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  +  K         A   
Sbjct: 721 TFNT--AIAAIMELMNKLAKAPQGAEQDRALTQ 751



 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 42/147 (28%), Gaps = 16/147 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F    +P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEEPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           +N+             E  ++  N A +  T  N +        L           T   
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIEYMKNQLKVLGFGY-DWDREVTTCR 129

Query: 130 PQMIYLIQ----NIILHGHAYEANNEI 152
           P+     Q     +   G  Y+  + +
Sbjct: 130 PEYYRWEQWFFTKLYEKGLVYKKTSAV 156


>gi|228988288|ref|ZP_04148383.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771460|gb|EEM19931.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|157803251|ref|YP_001491800.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166232834|sp|A8EXD2|SYR_RICCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157784514|gb|ABV73015.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 576

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGYNVTKEYYVN 164


>gi|254190884|ref|ZP_04897391.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938559|gb|EDO94229.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|315638950|ref|ZP_07894121.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
 gi|315480979|gb|EFU71612.1| valine--tRNA ligase [Campylobacter upsaliensis JV21]
          Length = 870

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE ++T       + A ++R  
Sbjct: 501 QSTNALEELPFKHIYLHALVKDEQGRKMSKSLGNVIDPNESIKT-------YSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAVQGR-DIKLSEDKLLQVRNFTNKIYNATNYLLLNENKFED 597


>gi|293382180|ref|ZP_06628123.1| valine--tRNA ligase [Enterococcus faecalis R712]
 gi|291080463|gb|EFE17827.1| valine--tRNA ligase [Enterococcus faecalis R712]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|257417098|ref|ZP_05594092.1| valyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
 gi|257158926|gb|EEU88886.1| valyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|257077439|ref|ZP_05571800.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294779640|ref|ZP_06745031.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|307269913|ref|ZP_07551239.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
 gi|256985469|gb|EEU72771.1| valyl-tRNA synthetase [Enterococcus faecalis JH1]
 gi|294453297|gb|EFG21708.1| valine--tRNA ligase [Enterococcus faecalis PC1.1]
 gi|306513703|gb|EFM82309.1| valyl-tRNA synthetase [Enterococcus faecalis TX4248]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|256960312|ref|ZP_05564483.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|293388509|ref|ZP_06633013.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|312905725|ref|ZP_07764747.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|312909080|ref|ZP_07767940.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
 gi|256950808|gb|EEU67440.1| valyl-tRNA synthetase [Enterococcus faecalis Merz96]
 gi|291082113|gb|EFE19076.1| valine--tRNA ligase [Enterococcus faecalis S613]
 gi|310628204|gb|EFQ11487.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
 gi|311290642|gb|EFQ69198.1| valyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|239637919|ref|ZP_04678880.1| leucyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596482|gb|EEQ79018.1| leucyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 804

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 56/178 (31%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++ +         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVNSHG-------ADTLRLYEMFMGPLDAAIAWSDKGLDGSRRFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
              G +   ++ +                  D +T+    AI  L     +  K  ++
Sbjct: 636 KEDGSLSDKIVDSNNKSLDKTYNQTVKKVTEDFDTLGFNTAISQLMVFINDCYKADEI 693


>gi|229175733|ref|ZP_04303239.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228607684|gb|EEK65000.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIADKYHEEFQRCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|225023694|ref|ZP_03712886.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
 gi|224943576|gb|EEG24785.1| hypothetical protein EIKCOROL_00557 [Eikenella corrodens ATCC
           23834]
          Length = 927

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 36/108 (33%), Gaps = 15/108 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++  GRKMSKS GN +   E+          + A ++RL   
Sbjct: 579 CATLGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAA 631

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            T Y   +  + + L        +   T +         L A   D N
Sbjct: 632 ATDYSGELAISKEILKRVTESYRRIRNTLS--------FLFANLKDFN 671


>gi|167586114|ref|ZP_02378502.1| leucyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|86609674|ref|YP_478436.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558216|gb|ABD03173.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 518

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 9/82 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A            +GFL  +G KMSKS GN +   EL
Sbjct: 259 DVHLVGKDIVRFHAIYWPAMLMSA--GLPLPKQVFGHGFLTKDGLKMSKSLGNTVDPFEL 316

Query: 292 LETKKFGGRSWPAPVIRLAMLM 313
           +       + + A  +R   L 
Sbjct: 317 V-------QQYGADAVRYYFLT 331


>gi|107021731|ref|YP_620058.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116688677|ref|YP_834300.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|123245293|sp|Q1BZ70|SYL_BURCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166230614|sp|A0K4I0|SYL_BURCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|105891920|gb|ABF75085.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|116646766|gb|ABK07407.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|172058284|ref|YP_001814744.1| leucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|229559918|sp|B1YKH4|SYL_EXIS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|171990805|gb|ACB61727.1| leucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 801

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 45/138 (32%), Gaps = 18/138 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  +E++++         A  +RL  M M      + ++   L  A   L + W    
Sbjct: 583 NVINPDEIVKSHG-------ADTLRLYEMFMGPLDASVSWSENGLDGARRFLDRVWRLFE 635

Query: 342 TSKGIIDPAVLSALYNDL 359
            +  I D   + A   D 
Sbjct: 636 RTADIQDVTTVDA---DF 650


>gi|257420570|ref|ZP_05597560.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|257162394|gb|EEU92354.1| valyl-tRNA synthetase [Enterococcus faecalis X98]
 gi|315156411|gb|EFU00428.1| valyl-tRNA synthetase [Enterococcus faecalis TX0043]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|256618285|ref|ZP_05475131.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|256597812|gb|EEU16988.1| valyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
 gi|315032301|gb|EFT44233.1| valyl-tRNA synthetase [Enterococcus faecalis TX0017]
 gi|315145977|gb|EFT89993.1| valyl-tRNA synthetase [Enterococcus faecalis TX2141]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|123967796|ref|YP_001008654.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
 gi|166229756|sp|A2BP36|SYI_PROMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123197906|gb|ABM69547.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
          Length = 968

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 193 LWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           LWK+ T  M+  ++S        W   C       L    D++  G D      ++ +  
Sbjct: 545 LWKKGTDTMDVWFDSG-----SSWAAVCE--LRSELKYPADLYLEGSDQHRGWFQSSLLT 597

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET--KKFGGRSWPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN +  N ++     K    ++ A V+RL
Sbjct: 598 SVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKTEPAYGADVLRL 657

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   T+ 
Sbjct: 658 WVSSVDYSVDVPIGSNILKQLADVYRKVRNTAR 690


>gi|53726229|ref|YP_103806.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|67641265|ref|ZP_00440047.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|121600067|ref|YP_993955.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124384509|ref|YP_001027020.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126448402|ref|YP_001081643.1| isoleucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|126452873|ref|YP_001065252.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|166998899|ref|ZP_02264751.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|242317301|ref|ZP_04816317.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254175326|ref|ZP_04881986.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254202509|ref|ZP_04908872.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254207844|ref|ZP_04914194.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254356261|ref|ZP_04972537.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|81823943|sp|Q62HL4|SYI1_BURMA RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52429652|gb|AAU50245.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|121228877|gb|ABM51395.1| isoleucyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124292529|gb|ABN01798.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126226515|gb|ABN90055.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|126241272|gb|ABO04365.1| isoleucine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147746756|gb|EDK53833.1| isoleucyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147751738|gb|EDK58805.1| isoleucyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148025258|gb|EDK83412.1| isoleucyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160696370|gb|EDP86340.1| isoleucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238522164|gb|EEP85610.1| isoleucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|242140540|gb|EES26942.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|243064980|gb|EES47166.1| isoleucine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|312863569|ref|ZP_07723807.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322517027|ref|ZP_08069915.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
 gi|311101105|gb|EFQ59310.1| isoleucine--tRNA ligase [Streptococcus vestibularis F0396]
 gi|322124395|gb|EFX95895.1| isoleucine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
          Length = 932

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQ---- 366
                   +  ++  L++      K   T           L A  +D N T  A+     
Sbjct: 623 TSVDTSNDVRISMDILSQVSESYRKIRNTLR--------FLLANTSDFNPTTDAVAFEDL 674

Query: 367 ------------ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                        L K  R++  N + L I+ A  + + +E+   +L+
Sbjct: 675 RSVDQYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVELSAFYLD 722


>gi|319761889|ref|YP_004125826.1| isoleucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
 gi|317116450|gb|ADU98938.1| isoleucyl-tRNA synthetase [Alicycliphilus denitrificans BC]
          Length = 951

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 54/167 (32%), Gaps = 27/167 (16%)

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA---- 250
           K +  +E  ++S    G   WH     M   + G   D  G   DL    H+        
Sbjct: 554 KSTDILEVWFDS----GSTFWH----VMRGTHAGMHHD-EGPEADLYLEGHDQHRGWFHS 604

Query: 251 ---QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
               +           +  H   ++ +G+KMSKS GN ++  ++            A +I
Sbjct: 605 SLLLASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVSPQQV-------SGKLGAEII 657

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
           RL    T Y   +    + L        +   T      +    DPA
Sbjct: 658 RLWCAATDYSGDLAIDDKILARVVDAYRRIRNTLRFLLANVSDFDPA 704


>gi|257088072|ref|ZP_05582433.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|256996102|gb|EEU83404.1| valyl-tRNA synthetase [Enterococcus faecalis D6]
 gi|315028135|gb|EFT40067.1| valyl-tRNA synthetase [Enterococcus faecalis TX2137]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|256962803|ref|ZP_05566974.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|307272656|ref|ZP_07553904.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
 gi|256953299|gb|EEU69931.1| valyl-tRNA synthetase [Enterococcus faecalis HIP11704]
 gi|306510651|gb|EFM79673.1| valyl-tRNA synthetase [Enterococcus faecalis TX0855]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 463 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 520

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 521 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 572

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 573 NFINKIWNASR 583


>gi|228930066|ref|ZP_04093076.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228829565|gb|EEM75192.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|228948767|ref|ZP_04111044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228810899|gb|EEM57243.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|254457523|ref|ZP_05070951.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207086315|gb|EDZ63599.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 523

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT-DIDDKIIERARQEHPSIP 91
           PT     HIG+AR  +  D LY+L ++   +    Y  N + +  D +    +       
Sbjct: 106 PT--GPLHIGHARGAVYGDTLYKLAKHLGYDITAEYYVNDSGNQIDLLGLSIQLYGRENI 163

Query: 92  INDAISIITSKNTQQFVKDTTR 113
           + +++    S    ++++   +
Sbjct: 164 LKESVEYPESYYRGEYLEGLAK 185


>gi|195125265|ref|XP_002007102.1| GI12751 [Drosophila mojavensis]
 gi|193918711|gb|EDW17578.1| GI12751 [Drosophila mojavensis]
          Length = 871

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R           +N+             E+ +   
Sbjct: 71  PYPSGNLHMGHVRVYTISDAVARFHRMCG--------KNVFQPIGWDSFGLPAENAANER 122

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEA 148
             A +  T KN  Q  +   RL C        +++  P+     Q+    +   G AY+ 
Sbjct: 123 GVAPAEWTKKNIAQMKQQLERLGCSFDWAHELSSSS-PEYYKWTQSLFLMLHKRGLAYQN 181

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D      R   K  KK
Sbjct: 182 EALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|167718453|ref|ZP_02401689.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|116250663|ref|YP_766501.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115255311|emb|CAK06386.1| putative isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 982

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 631 SAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 683

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA---- 364
           + + Y + +      +        K   T          D     AL +           
Sbjct: 684 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDKGEEIALAD---LPELEQLM 740

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L +L RE+    D   I  A      +E+   + +
Sbjct: 741 LHRLAELDELVRENYDTFDFKKIARALIDFANVELSAFYFD 781


>gi|77747505|ref|NP_297839.2| methionyl-tRNA synthetase [Xylella fastidiosa 9a5c]
          Length = 690

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 16/103 (15%)

Query: 219 CSA-MSSHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-N 268
           CS       +G+ FD H         HH       N  A    A        A   +H N
Sbjct: 261 CSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPAVLHGTGHRAPTRLHVN 320

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           G+L ++G KMSKS G FI     L+             +R   
Sbjct: 321 GYLTVDGAKMSKSRGTFIMARTYLDA------GLEPDALRYYF 357


>gi|18311506|ref|NP_563440.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|25009370|sp|Q8XHG1|SYM_CLOPE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|18146190|dbj|BAB82230.1| methionine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 645

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 64/186 (34%), Gaps = 52/186 (27%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D L F  H         A  +E    ++ H G+L ++G KMSKS GN +    
Sbjct: 255 DVHLIGKDILRF--HTIYWPIMLMALGLELPKQVFGH-GWLLVDGGKMSKSKGNVVDPVV 311

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------ 338
           L+         + A  +R  +L       I F    L   EI + K              
Sbjct: 312 LVNM-------FGADAVRYYLLR-----EIPFGSDGLFNNEIFIKKVNTDLANDLGNLLS 359

Query: 339 --------------QTSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARE 374
                         Q  T K  ID  +++ AL          + L    A++++  L   
Sbjct: 360 RTIAMVYKYFGGVIQAPTCKEPIDDELINLALSTPGKVEASIDALKIPEALESIWTLISR 419

Query: 375 STKNHD 380
           + K  D
Sbjct: 420 ANKYID 425


>gi|30265080|ref|NP_847457.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47530586|ref|YP_021935.1| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49187891|ref|YP_031144.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|65317025|ref|ZP_00389984.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
 gi|165870881|ref|ZP_02215533.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167634931|ref|ZP_02393249.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|167639976|ref|ZP_02398244.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170685894|ref|ZP_02877117.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|170707026|ref|ZP_02897483.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177652275|ref|ZP_02934778.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567277|ref|ZP_03020192.1| putative methionyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227817810|ref|YP_002817819.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229602311|ref|YP_002869277.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
 gi|254687371|ref|ZP_05151228.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254725384|ref|ZP_05187167.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254733720|ref|ZP_05191436.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254740558|ref|ZP_05198249.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|254753180|ref|ZP_05205216.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254761523|ref|ZP_05213544.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|68566041|sp|Q81XF9|SYM2_BACAN RecName: Full=Methionyl-tRNA synthetase 2; AltName:
           Full=Methionine--tRNA ligase 2; Short=MetRS 2
 gi|254782848|sp|C3P025|SYM_BACAA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|254782849|sp|C3LD96|SYM_BACAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30259757|gb|AAP28943.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47505734|gb|AAT34410.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181818|gb|AAT57194.1| methionyl-tRNA synthetase, putative [Bacillus anthracis str.
           Sterne]
 gi|164713390|gb|EDR18915.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167512057|gb|EDR87435.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|167529681|gb|EDR92430.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170128129|gb|EDS96999.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|170670358|gb|EDT21098.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|172082281|gb|EDT67347.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190561781|gb|EDV15751.1| putative methionyl-tRNA synthetase [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006250|gb|ACP15993.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
           684]
 gi|229266719|gb|ACQ48356.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|269940686|emb|CBI49066.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TW20]
          Length = 917

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H  F++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFFMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|254796953|ref|YP_003081790.1| valyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590200|gb|ACT69562.1| valyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 878

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 17/58 (29%), Gaps = 4/58 (6%)

Query: 8  YNTLERKITE----FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          YN   R   +    F         +    PT+    HIG+       D + R  R   
Sbjct: 15 YNCKTRWKEKQMYKFSPQYKDIFSIDTPPPTISGSLHIGHVFSYCHTDFIARYQRMRG 72


>gi|229161491|ref|ZP_04289472.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
 gi|228622028|gb|EEK78873.1| Lysyl-tRNA synthetase [Bacillus cereus R309803]
          Length = 517

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 66/380 (17%), Positives = 106/380 (27%), Gaps = 77/380 (20%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R +I    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIITTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             R +    D    +     P   I D     +       ++F K               
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE------- 120

Query: 125 ATNHIPQMIYLIQNIILHG---HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
               I Q                 Y    EI     S    G  S  + +     T   E
Sbjct: 121 -VEFIYQHAEYRSRRYNKNILEALYRRK-EIYDILMSFKT-GECSEEERESFYPVTLYCE 177

Query: 182 KYHKK----NPADFILWKR-----------------STPMEPGWESPWGRGRPGWHIECS 220
           K  K        D +L K                  +  M+  W+  W      W IE  
Sbjct: 178 KCGKDATTITHFDEVL-KSVQYECVCGNQNELSVLNTNKMKLNWKIDWPMR---WMIEDV 233

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKM 278
                          GG D         +++    +     A  ++   F+ ++G   KM
Sbjct: 234 IFEP-----------GGRDHSSETGSYNVSKEIAREIFNGEAPHYVAYDFIGIKGHHEKM 282

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLS 335
           S S+GN IT +ELL       + +   VI        YR    F     + +        
Sbjct: 283 SSSSGNSITPSELL-------KVYLPEVILFMF--AKYRPNAAFHIGLDEDVIRNYTEYE 333

Query: 336 KWPQTSTSKGIIDPAVLSAL 355
           +   +  +K + +  +  A+
Sbjct: 334 RLKDSYENKTLKNEDLFDAI 353


>gi|167917909|ref|ZP_02505000.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|167737503|ref|ZP_02410277.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|221070006|ref|ZP_03546111.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1]
 gi|220715029|gb|EED70397.1| arginyl-tRNA synthetase [Comamonas testosteroni KF-1]
          Length = 571

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 55/331 (16%), Positives = 101/331 (30%), Gaps = 66/331 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERAR--Q 85
           PT     H+G+ R   + D +  L      +    +  N     I  +      RA+  +
Sbjct: 132 PT--GPLHVGHGRQAAIGDAISNLYSSQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFK 189

Query: 86  EHPSIPINDAISIITSKNTQ-QFVKDTTR--LA---CLAPTHQPRATNHIPQMIYLIQNI 139
                   D+ + +        ++ D  +  L      A   +  A   +      I+  
Sbjct: 190 PGDECWPTDSDNPLAKNFYNGDYIADIAKAFLNKETIKADDREFTANGDVEDY-DNIRQF 248

Query: 140 ILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--EKYHKKNPADFILW 194
                AY   E + ++         Y        +   +   V       K    D  LW
Sbjct: 249 A---VAYLRNEQDKDLQAFNLKFDEY-YLESSLYENGHVEATVNRLIANGKTYEQDGALW 304

Query: 195 KRSTPMEP-------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
            RST             +  +    P   +HI+          KV +I G        HH
Sbjct: 305 LRSTDYGDDKDRVMRKTDGGYTYFVPDVAYHIQKF---KRGFTKVVNIQGTD------HH 355

Query: 246 ENEIAQSCCADRI------EKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETK 295
              IA+     +       E   +  +H   + +   G   K+SK  G+++T+ +L+E  
Sbjct: 356 -GTIARVRAGLQAADVGIPEGYPDYVLHT-MVRVVRNGEEVKISKRAGSYVTLRDLIEWT 413

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP-IDFTVQ 325
                      +R  +L    R+P  ++T  
Sbjct: 414 -------SKDAVRFFLLS---RKPDTEYTFD 434


>gi|88601905|ref|YP_502083.1| isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
 gi|121731688|sp|Q2FPJ4|SYI_METHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|88187367|gb|ABD40364.1| Isoleucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
          Length = 1062

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       ++ +H   L+ +GRKMSKS GN +T  E++       + +   V+RL +
Sbjct: 566 STIAFNRSPYKSVLMHGFALDADGRKMSKSLGNVVTPEEVV-------QKFGVDVLRLYI 618

Query: 312 LMT 314
           L +
Sbjct: 619 LSS 621


>gi|53718547|ref|YP_107533.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134281015|ref|ZP_01767724.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|167814621|ref|ZP_02446301.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|167823091|ref|ZP_02454562.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 9]
 gi|226194373|ref|ZP_03789971.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237811169|ref|YP_002895620.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|81824819|sp|Q63WI3|SYI1_BURPS RecName: Full=Isoleucyl-tRNA synthetase 1; AltName:
           Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|52208961|emb|CAH34900.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|134247321|gb|EBA47406.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|225933458|gb|EEH29447.1| isoleucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|237505211|gb|ACQ97529.1| isoleucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|167909886|ref|ZP_02496977.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|254196170|ref|ZP_04902594.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|169652913|gb|EDS85606.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.17,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|319783483|ref|YP_004142959.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317169371|gb|ADV12909.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 516

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 39/117 (33%), Gaps = 14/117 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D L R  R    +        +T  D+  ++    +  +         
Sbjct: 19  PHIGHAYTVIATDALARFQRLDGKDVFF-----LTGTDEHGLK---MQQTAEKEGITPLA 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           +  +N+  F   T  +         R T   P+     Q I     A  AN +I  D
Sbjct: 71  LADRNSAIFRAMTEAMGGSN-DQYIRTTE--PRHYESCQAIWK---AMAANGDIYLD 121


>gi|315453935|ref|YP_004074205.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132987|emb|CBY83615.1| arginyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 535

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 18/89 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------------- 79
           PT     HIG+AR  I  D L RL R+   +    Y  N  D+  +I             
Sbjct: 120 PT--GPLHIGHARGAIFGDSLCRLGRFLGVKTHAEYYVN--DMGAQIHMLGLSVYLRIQE 175

Query: 80  IERARQEHPSI-PINDAISIITSKNTQQF 107
           +  A+ E+P      D I+ +  K  + F
Sbjct: 176 MRGAQVEYPPNAYKGDYITELAQKALEHF 204


>gi|269123753|ref|YP_003306330.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
 gi|268315079|gb|ACZ01453.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
          Length = 624

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 60/326 (18%), Positives = 99/326 (30%), Gaps = 74/326 (22%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG A   I+ DV+ R             VR IT ID+      + +  +   N     
Sbjct: 17  PHIGTAYTTIICDVVARYNNLKGKN-----VRLITGIDEH---GQKIQESAEKNNVTPQQ 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              K  + F+     L     +   R T   H   +  +I+ +  +G  Y       +  
Sbjct: 69  WVDKMKEDFINLWDILNIDY-SEFVRTTSDKHKFTVGDIIRKVYENGDIYSGEYIGKYSV 127

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST------PMEPGW------ 204
           S    + + S + +D   MG  V +   K     F L K            P +      
Sbjct: 128 SE-ETFVTES-QLVDGLYMGKPVIDMKEKSFF--FKLSKYEDKLLKFYEEHPNFIRPNNR 183

Query: 205 ------------------ESPWGRGRP----------GWHIECSA--MSSHYLGKVFDI- 233
                              + +  G P           W    ++   ++ Y  ++FDI 
Sbjct: 184 KNEVISFIKQGLQDLSISRTTFNWGIPLELEKGHIVYVWFDALNSYLTAAGYNSEIFDIY 243

Query: 234 -------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
                  H  G D++  H     A    A          +H G+   +G+KMSKS GN +
Sbjct: 244 WNNSEVVHMVGKDILRFHAIIWPAMLMAAGIKLPDVLA-VH-GWWTKDGQKMSKSLGNVV 301

Query: 287 TINELLETKKFGGRSWPAPVIRLAML 312
              +           +     R  +L
Sbjct: 302 DPID-------EVNKYGLDQFRYFLL 320


>gi|241859197|ref|XP_002416187.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215510401|gb|EEC19854.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 755

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 39/219 (17%), Positives = 62/219 (28%), Gaps = 32/219 (14%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DPS  +MYV     Y     H+G+ R   + D   RL +     K V +           
Sbjct: 1   DPSK-KMYVLSMFPYPSGQLHLGHVRVYTISDTYARLYKMLG--KHVIHPMGWDSFGLPA 57

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +  N+     T KN     K    +       +   +   P      Q  
Sbjct: 58  ENAA------VERNEDPRNWTEKNIDSMKKQLKDMNF-NFDWEREISTCDPNYYKWTQYL 110

Query: 138 --NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF--- 191
              +   G  Y  N+ +              +  ++D +    R   K  KK    +   
Sbjct: 111 FLKLYEKGLVYRKNSVVHWDPVDRT----VLADEQVDAEGRSWRSGAKVEKKTLRQWFVR 166

Query: 192 -------ILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
                  +L     P    W+      R GW  EC+  +
Sbjct: 167 TTFLSKDLLLGLEDPTLRDWDEVLAMQR-GWIGECTGFA 204


>gi|196033059|ref|ZP_03100472.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218906235|ref|YP_002454069.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
 gi|226695272|sp|B7JEJ3|SYM_BACC0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|195994488|gb|EDX58443.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
 gi|218535969|gb|ACK88367.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|85057769|ref|YP_456685.1| methionyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
 gi|84789874|gb|ABC65606.1| methiony-tRNA synthetase [Aster yellows witches'-broom phytoplasma
           AYWB]
          Length = 520

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 10/99 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H                    ++ + ++  +  KMSKS GN + +++L
Sbjct: 259 DMHVIGKDILRFHLIYWPILLMAL--EISLPKQFLTHPWILFDKNKMSKSKGNVLYVDDL 316

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           L       + +P   IR  +L    Y +  + T + L E
Sbjct: 317 L-------KHFPVDSIRYFVLSEIPYAQDGNITYELLVE 348


>gi|82751346|ref|YP_417087.1| leucyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123740972|sp|Q2YTH9|SYL_STAAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82656877|emb|CAI81307.1| leucyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 804

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLS----ALY-----------NDLNTVS---AIQALHKLARESTKNHDL 381
              G +   +++    +L            +D  T+    AI  L     E  K  ++
Sbjct: 636 NEDGTLSSKIVTTNNKSLDKVYNQTVKKVTDDFETLGFNTAISQLMVFINECYKVDEV 693


>gi|13476816|ref|NP_108385.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|14027577|dbj|BAB53846.1| isoleucyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 1003

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +GRKMSKS GN +   ++
Sbjct: 627 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYDTVVTHGFTMDEDGRKMSKSLGNTVVPQDV 686

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           +       +   A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 687 I-------KQSGADILRLWVVTTDY-----WEDQRLGKNVLQTNIDAYRKLRNTIRWMLG 734

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +   L A+                +  L ++ R+     +   I  A    + 
Sbjct: 735 TLAHDDGETVPLEAM------PELERLMLHRLAELDEVVRQGYDAFEFKRITRALVDFMV 788

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 789 VELSAFYFD 797


>gi|332686281|ref|YP_004456055.1| isoleucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
 gi|332370290|dbj|BAK21246.1| isoleucyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
          Length = 928

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 18/149 (12%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           EGRKMSKS GN I   +++       +   A ++RL ++   Y   +  ++  L +   +
Sbjct: 590 EGRKMSKSLGNTILPEKVI-------KQLGADILRLWVISVDYEADVRVSMDILKQVAEI 642

Query: 334 LSKWPQT----STSKGIIDPAVLSALYNDLNTVSAI------QALHKLARESTKNHDLLP 383
             K   T      +    DP      YN+L +V         Q + ++  E  + ++ L 
Sbjct: 643 YRKIRNTMRFLLANTDDFDPNKNKVHYNELRSVDKYMMIRLNQVIKEIREEGYEKYNFLR 702

Query: 384 IFNASAHILGIEVCKEHLNKNISIA-IEK 411
           I+    + L +++   +L+    +  IE 
Sbjct: 703 IYRQITNFLTVDLSSFYLDFAKDVVYIEA 731


>gi|289167475|ref|YP_003445744.1| isoleucyl-tRNA synthetase [Streptococcus mitis B6]
 gi|288907042|emb|CBJ21876.1| isoleucyl-tRNA synthetase [Streptococcus mitis B6]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  +++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDAVAFDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|167901637|ref|ZP_02488842.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
 gi|217419606|ref|ZP_03451112.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217396910|gb|EEC36926.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|70732744|ref|YP_262507.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123761979|sp|Q4K5H6|SYL_PSEF5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68347043|gb|AAY94649.1| leucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 868

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 37/140 (26%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  QPGKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +  N A +  T +N          L  LA       T   P      Q  
Sbjct: 87  ENAA------MKNNVAPAKWTYENIAYMKTQLRSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|254251624|ref|ZP_04944942.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894233|gb|EAY68113.1| Isoleucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|126442280|ref|YP_001058018.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126221773|gb|ABN85279.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 668]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|76809344|ref|YP_332534.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254181497|ref|ZP_04888094.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254258530|ref|ZP_04949584.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|76578797|gb|ABA48272.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|184212035|gb|EDU09078.1| isoleucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|254217219|gb|EET06603.1| isoleucine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|332533547|ref|ZP_08409409.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036949|gb|EGI73408.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
          Length = 673

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A+  + T N++ H GF+ + G KMSKS G FI     L+
Sbjct: 288 HFIGKDIIYFHSLFWPAMLEGANFRKPT-NVFAH-GFVTVNGEKMSKSKGTFIKARTYLD 345

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 346 NLN-------PEYLRYY 355


>gi|329573413|gb|EGG55023.1| valine--tRNA ligase [Enterococcus faecalis TX1467]
          Length = 829

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 50/131 (38%), Gaps = 12/131 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+I       I QS          N+ IH    + 
Sbjct: 412 GWPDEASEDYQRYFPTSTLV--TGYDIIAFWVSRMIFQSLEFTGERPFQNVLIHGLIRDE 469

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           +GRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 470 QGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 521

Query: 332 ILLSKWPQTST 342
             ++K    S 
Sbjct: 522 NFINKIWNASR 532


>gi|294496538|ref|YP_003543031.1| lysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667537|gb|ADE37386.1| lysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 527

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 9/109 (8%)

Query: 19  QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           + ++  N  +   G T     H+GN R ++  D  YR L        + Y+ +  D   K
Sbjct: 14  ETLERGNTHLVATGITPSGHIHVGNMREVVTADAAYRALLDRDANAELIYIADTYDPLRK 73

Query: 79  I---IERARQEHPSIPIND------AISIITSKNTQQFVKDTTRLACLA 118
           +   ++ + +EH   P+++                Q F+K   RL    
Sbjct: 74  VYPFLDESYEEHVGKPLSEIPCPCGECKNYADHFLQPFLKSLHRLGIKP 122


>gi|260769036|ref|ZP_05877970.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617066|gb|EEX42251.1| methionyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 658

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 63/192 (32%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L 
Sbjct: 266 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLN 323

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 324 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 368

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L +              A    + ++      A   I  + +   +
Sbjct: 369 SRNAGFITKRFDGKLSDSFAEPELYNEFVAAADRIAELYEAREFGRAIREITALADKANQ 428

Query: 400 HLNKNISIAIEK 411
           ++++     + K
Sbjct: 429 YVDEKAPWVVAK 440


>gi|227517771|ref|ZP_03947820.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104]
 gi|227074780|gb|EEI12743.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0104]
          Length = 710

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 52/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 534 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 593

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 594 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 646

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L     E+ K   L
Sbjct: 647 DEEGKMRDRITTINDGRLTKIYHQTVKKVTEDMANLHFNT--AISQLMVFVNEANKVDAL 704


>gi|17227729|ref|NP_484277.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|25009375|sp|Q8Z068|SYM_ANASP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|17135211|dbj|BAB77757.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 530

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 76/461 (16%), Positives = 141/461 (30%), Gaps = 108/461 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  D + R  +    +     V  IT  D+      + +  +  +  
Sbjct: 20  VNDVPHIGSAYTTMAADAVARFQKLLGRD-----VLLITGTDEH---GQKIQRSAESLGK 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
           A      +    F+     L         R T    + I       +   G  Y+   + 
Sbjct: 72  APQEFCDEIVPSFMSLWRLLNIQY-DRFSRTTAVRHKAIVDEFFARVWEAGDIYQGQQKG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD--FILWKRSTPMEPGWES---- 206
            +   S   +    R  ++  +    V ++   ++  +  F L K  T +E  ++S    
Sbjct: 131 WYCV-SCEEF-KEERELLEGNRCPIHVNKEVEWRDEQNYFFRLSKYQTQLEEFYQSHPDF 188

Query: 207 ----------------------------PWGRGRPG--------WHIECSAMSSHYL--- 227
                                        WG   P         W     A  +  L   
Sbjct: 189 IQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPNDPKHTLYVWFDALLAYVTALLDPE 248

Query: 228 ---------GKVFDI--HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
                    GK + I  H  G D++  H     A    A  +     ++ H GFL  +G+
Sbjct: 249 DEPTLENALGKWWPINLHLIGKDILRFHAVYWPAMLLSA-GLPLPDRVFGH-GFLTKDGQ 306

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF-------------- 322
           KM KS GN +             + + +  +R   L     + I+F              
Sbjct: 307 KMGKSLGNTV-------DPVGLVQQYGSDAVRYYFL-----KEIEFGKDGDFNEVRFIHV 354

Query: 323 -TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL---NTVSAIQALHKLARESTKN 378
                  +   LL++    +  K       LS    D+   NT+ A+     L  +  + 
Sbjct: 355 LNADLANDLGNLLNR--TLNMVKKYCANYALSITNEDIPAENTLKALGV--DLGAKVKQA 410

Query: 379 HDLLPIFNASAHILGI-EVCKEHLNKNISIAIEKLVQERLI 418
           +++L    A   +L + +   + ++     ++ K  QER  
Sbjct: 411 YEVLAFNQACGVVLSLVQASNKFIDDQAPWSLYK--QERQQ 449


>gi|331007753|ref|ZP_08330877.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330418437|gb|EGG92979.1| Leucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 866

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 42/144 (29%)

Query: 268 NGFLNLEGR-KMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQ 325
              + + G  KMSKS  N +     +         + A  +RL  M      + ++++  
Sbjct: 614 GELVEIGGTTKMSKSKNNGVDPQTAVNL-------YGADTVRLFTMFAAPPTQTLEWSDS 666

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALY-----------------------ND---- 358
            +  A   L +  +T+   G I+    +AL                        +D    
Sbjct: 667 GVEGASRFLRRLWKTT--HGHIEAGTPAALNTEKLDQTQQDLRRKTHETIAKVTDDYAVR 724

Query: 359 --LNTVSAIQALHKLARESTKNHD 380
              NT  AI A+ +L  E ++N D
Sbjct: 725 QQFNT--AIAAVMELLNEVSRNAD 746



 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 44/145 (30%), Gaps = 19/145 (13%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              DP+  + Y      Y     H+G+ R   + DV+ R  R     K V +        
Sbjct: 26  VTEDPNKEKFYCLAMFPYPSGKLHMGHVRNYTITDVISRFQRMLG--KNVLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL------ACLAPTHQPRATNHIP 130
                 A      I  N A +  T  N     +    L           T QP  + +  
Sbjct: 84  LPAENAA------IQNNTAPAKWTYSNIDYMKEQLNSLGFGFDWNRELATCQP--SYYKW 135

Query: 131 QMIYLIQNIILHGHAYEANNEIIFD 155
           +  +    +   G  Y+  + + +D
Sbjct: 136 EQWFFT-RLYEKGLVYKKMSTVNWD 159


>gi|303244991|ref|ZP_07331314.1| leucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
 gi|302484643|gb|EFL47584.1| leucyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
          Length = 976

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 45/119 (37%), Gaps = 8/119 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DL+  H    I         E      + NG++ +EGRK+SKS G  + + 
Sbjct: 604 PLDWRCSAKDLVPNHLTFMIFNHVALFDEEFWPRGIVVNGYVTIEGRKLSKSKGPVLPVM 663

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           E+ E        +   V R  +       +  D   + + +A+  L K+ + + +   I
Sbjct: 664 EVAE-------KYGPDVARFYITTCAELPQDADVKFKDMEKAKDNLIKFYELAVNVKDI 715


>gi|229124576|ref|ZP_04253761.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228658916|gb|EEL14571.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|227486701|ref|ZP_03917017.1| leucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
 gi|227235289|gb|EEI85304.1| leucine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
          Length = 800

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 46/124 (37%), Gaps = 25/124 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQ 325
           H   L  +G+KMSKS GN I  ++++       R + A  +R   M M  +     ++ +
Sbjct: 569 HGMILGPDGQKMSKSRGNVINPDDII-------RDFGADTLRTYEMFMGDFSSVAKWSDE 621

Query: 326 RLTEAEILLSKWP----------QTSTSKGIIDPAVLSALYND-----LNTVSAIQALHK 370
            +      L +            + S    I+    +  +  D      NT  AI  L  
Sbjct: 622 GVKGCRKYLERVYNLLDLVVDGDEYSKELEILTNQTIKKVGEDYENLKFNT--AIAQLMT 679

Query: 371 LARE 374
           L+ E
Sbjct: 680 LSNE 683


>gi|242016182|ref|XP_002428710.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212513384|gb|EEB15972.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 1203

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 49/164 (29%), Gaps = 53/164 (32%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           NG L L   KMSKS GNF+T++E ++                            F+   +
Sbjct: 707 NGHLMLNSMKMSKSEGNFLTLSEAVDK---------------------------FSADGM 739

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLLPI 384
                   +         I D   +  + +     +AI  L+   +  +E  K    L  
Sbjct: 740 --------RLSLADAGDSIEDANFVETMAD-----AAILRLYNFIEWVKEVLKPESNLRT 786

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
                     +  +   +K     I   ++E     +   F  A
Sbjct: 787 ----------DSLETFNDKVFKSEINLKIKESEKFYENMMFKEA 820


>gi|119962681|ref|YP_948227.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
 gi|119949540|gb|ABM08451.1| methionyl-tRNA synthetase [Arthrobacter aurescens TC1]
          Length = 519

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    E    +    TD         + +  +         
Sbjct: 22  PHIGHAYEVIATDAMARFKRLDGHE---VFFMTGTD-----EHGLKMQQSAEKEGLTAKQ 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F + +  L         R T  +H      + + +  +G  Y +  E  +  
Sbjct: 74  LADRNSAAFKQMSQDLGISH-DRFIRTTDQDHYAASQAIWKKMEANGDIYLSKYEGWYSV 132

Query: 157 SSIPNY 162
                Y
Sbjct: 133 RDEAYY 138



 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 52/184 (28%), Gaps = 42/184 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    + IH GFL   G KMSKS GN +   + 
Sbjct: 262 DVHVIGKDISRFHAIYWPAFLMSA-GLELPKRVMIH-GFLTNNGVKMSKSLGNVVAPQDF 319

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THY---------REPIDFTVQRLTE------ 329
           +         +     R   L         +Y            +      L +      
Sbjct: 320 VA-------QYGLDQCRYFFLREVPFGADGNYNHEAIVGRMNSDLANNFGNLAQRSLSMV 372

Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
           A+    + P+           +  A             L   AR +    +      A  
Sbjct: 373 AKNCEGRVPEPGEFTAEDKALLAQA-----------GELLDTARAAFDKQEFSRALEAIW 421

Query: 390 HILG 393
            +LG
Sbjct: 422 TVLG 425


>gi|330815527|ref|YP_004359232.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327367920|gb|AEA59276.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|228939711|ref|ZP_04102292.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228972573|ref|ZP_04133177.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228979182|ref|ZP_04139525.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228780539|gb|EEM28763.1| Lysyl-tRNA synthetase [Bacillus thuringiensis Bt407]
 gi|228787114|gb|EEM35089.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228819943|gb|EEM65987.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|326940307|gb|AEA16203.1| class 1 lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 517

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 72/461 (15%), Positives = 131/461 (28%), Gaps = 82/461 (17%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    +     P   I D     +       ++F K               
Sbjct: 69  RFRKVPKNIDPSFAK-YMGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQH 127

Query: 124 ---RATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGS----FS 166
              R+  +   ++           I      G   E         T      G      +
Sbjct: 128 DEYRSGRYNENILEALYKRKEIYDILMDFKTGECSEKERESFYPATLYCERCGKDTTTIT 187

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
                 + +         K+          +  M+  W+  W      W IE        
Sbjct: 188 HFNEVLKIVRYECECGNEKELSVL-----NTNKMKLNWKIDWPMR---WMIEDVVFEP-- 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGN 284
                    GG D         +++          A  ++   F+ ++G   KMS S+GN
Sbjct: 238 ---------GGRDHSSETGSYNVSKEIARKIFNCEAPHYVAYDFIGIKGNHEKMSSSSGN 288

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
            IT ++LL       + +   VI        Y+    F    +   E ++  + +    K
Sbjct: 289 SITPSDLL-------KVYIPEVILFMF--AKYKPGAAF---HIGLYEDVIRNYTEYERLK 336

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
              +  +L     DL     +  +  + +E        P FN  A  L +      + + 
Sbjct: 337 DSYENKMLK--NEDLFDAIKLSIVDSVFKE-------YPRFNQVAGTLPLLNFDSTILQG 387

Query: 405 ISIAIE---KLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           I   I+    L + R+I  + + +     IR     K   +
Sbjct: 388 ILKKIDRSYALDEMRVISNRAEYW-----IRNFQSEKLIAV 423


>gi|229094153|ref|ZP_04225233.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228689256|gb|EEL43077.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|313125245|ref|YP_004035509.1| lysyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291610|gb|ADQ66070.1| lysyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 549

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 59/173 (34%), Gaps = 34/173 (19%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +   +  L G  +S S GN +T+ E+LE  +         V+R    +   R+  D  + 
Sbjct: 302 MTYEWFTLNGEALSSSAGNIVTVPEILELLE-------PEVLRYFFALNP-RKARDLDLS 353

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
           RL +      ++ +     G +D   L+          A   +    RE     D +   
Sbjct: 354 RLDQLVDDFDRFERAYF--GDVDDETLTEFAE-----RAYPFVVDEVRE-----DRVRFP 401

Query: 386 NASAHILGIEVCKEH-----------LNKNISIAIEKLVQERLILLKMKKFSS 427
              A +LG+   +E            ++     A+E+ ++          ++ 
Sbjct: 402 YTFAAVLGMTDDREVRIQMARNEGHIIDDTPEWAVEEALERVEKARA---WAE 451


>gi|196040453|ref|ZP_03107753.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
 gi|196028585|gb|EDX67192.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|49478861|ref|YP_039056.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|68565980|sp|Q6HBM0|SYM1_BACHK RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|49330417|gb|AAT61063.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|332523553|ref|ZP_08399805.1| leucine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314817|gb|EGJ27802.1| leucine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 833

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVIE-------EYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQT-------STSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +        + + G +D             +  +    NT  AI  L      + K
Sbjct: 662 DRVYRLITTKTIVAENNGALDKVYHETVKAVTEQIEVM--KFNT--AIAQLMIFINAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EESL 721


>gi|282162890|ref|YP_003355275.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282155204|dbj|BAI60292.1| isoleucyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 1105

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML- 312
                    ++ +H   L+ +GRKMSKS GN +   E+LE        + A  +RL +L 
Sbjct: 621 VGFGKAPYNSVCMHGFTLDDQGRKMSKSLGNVVAPEEVLE-------KFGADALRLYVLS 673

Query: 313 -MTHYREPIDFTVQRLTEAEILLS 335
               + E + F+          L+
Sbjct: 674 QSAPW-EDLSFSWDECGNVYRTLN 696


>gi|254409885|ref|ZP_05023665.1| isoleucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
 gi|196182921|gb|EDX77905.1| isoleucyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
          Length = 1163

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 51/133 (38%), Gaps = 6/133 (4%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ I  S   +      ++  H   L+ +GRKMSKS G
Sbjct: 596 REELSYPVDMYLEGSDQHRGWFQSSILTSVATNGCAPYKSVLTHGFVLDEQGRKMSKSVG 655

Query: 284 NFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N +    ++E  K   +   + A ++RL +    Y   +      L +   +  K   T+
Sbjct: 656 NVVDPATIIEGGKNHKQEPPYGADMLRLWVSSVDYSVDVPIGQGILKQLSDIYRKIRNTA 715

Query: 342 T----SKGIIDPA 350
                +    DPA
Sbjct: 716 RFLLGNLHDFDPA 728


>gi|164659888|ref|XP_001731068.1| hypothetical protein MGL_2067 [Malassezia globosa CBS 7966]
 gi|159104966|gb|EDP43854.1| hypothetical protein MGL_2067 [Malassezia globosa CBS 7966]
          Length = 1057

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 36/94 (38%), Gaps = 3/94 (3%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA---PVIR 308
           +C A      AN+  H   ++  GRKMSKS GN I     ++        +P     V+R
Sbjct: 674 TCGAGAAAPFANLVTHGFVVDEAGRKMSKSLGNVIAPAAFVQGDPAAPTDFPPLGADVLR 733

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                T Y +    +V  +      + K   T+ 
Sbjct: 734 WWAAKTDYTKDTPISVLIMKHVTDEVRKLRSTAR 767


>gi|84029563|sp|Q983N4|SYI_RHILO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 993

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +GRKMSKS GN +   ++
Sbjct: 617 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYDTVVTHGFTMDEDGRKMSKSLGNTVVPQDV 676

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           +       +   A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 677 I-------KQSGADILRLWVVTTDY-----WEDQRLGKNVLQTNIDAYRKLRNTIRWMLG 724

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +   L A+                +  L ++ R+     +   I  A    + 
Sbjct: 725 TLAHDDGETVPLEAM------PELERLMLHRLAELDEVVRQGYDAFEFKRITRALVDFMV 778

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 779 VELSAFYFD 787


>gi|328946814|gb|EGG40951.1| valine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 883

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|325690919|gb|EGD32919.1| valine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 882

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|301056527|ref|YP_003794738.1| methionine--tRNA ligase [Bacillus anthracis CI]
 gi|300378696|gb|ADK07600.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|228936320|ref|ZP_04099118.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823152|gb|EEM68986.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|227889741|ref|ZP_04007546.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849605|gb|EEJ59691.1| valyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 879

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          ++ +H    + 
Sbjct: 460 GWPDEDSEDFKRYFPTNTLV--TGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDP 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +GRKMSKS GN +   ++++        + A  +R  +L  
Sbjct: 518 QGRKMSKSLGNGVDPMDVVD-------EYGADALRWFLLNG 551


>gi|221199257|ref|ZP_03572301.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221205841|ref|ZP_03578856.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221174679|gb|EEE07111.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180542|gb|EEE12945.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGVDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|162447562|ref|YP_001620694.1| isoleucine amino-acyl tRNA synthetase [Acholeplasma laidlawii
           PG-8A]
 gi|259511492|sp|A9NG38|SYI_ACHLI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161985669|gb|ABX81318.1| isoleucine amino-acyl tRNA synthetase [Acholeplasma laidlawii
           PG-8A]
          Length = 896

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +   D +     I  H   L+ +GRKMSKS GN I    ++  +        A V+RL +
Sbjct: 559 AIAVDGVSPYKEIVSHGFVLDGKGRKMSKSLGNVIDPLTVMNDQG-------ADVLRLWV 611

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   +  +   + +      K+  T
Sbjct: 612 ASVDYEADVRISNDLMKQVSESYRKFRNT 640


>gi|150401370|ref|YP_001325136.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|166229747|sp|A6UVK2|SYI_META3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|150014073|gb|ABR56524.1| isoleucyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 1040

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN +  ++++E        + A ++R 
Sbjct: 578 ALSEIVFDDIPYKKCMMHGFTLDETGEKMSKSIGNVVNPDDVVE-------EFGADLLRF 630

Query: 310 AMLMT 314
            +L  
Sbjct: 631 YLLSA 635


>gi|182682199|ref|YP_001830359.1| methionyl-tRNA synthetase [Xylella fastidiosa M23]
 gi|32130163|sp|Q87B68|SYM_XYLFT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710940|sp|B2I7S0|SYM_XYLF2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|28057584|gb|AAO29432.1| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|182632309|gb|ACB93085.1| methionyl-tRNA synthetase [Xylella fastidiosa M23]
          Length = 702

 Score = 42.1 bits (98), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 16/103 (15%)

Query: 219 CSA-MSSHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-N 268
           CS       +G+ FD H         HH       N  A    A        A   +H N
Sbjct: 273 CSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPAVLHGTGHRAPTRLHVN 332

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           G+L ++G KMSKS G FI     L+             +R   
Sbjct: 333 GYLTVDGAKMSKSRGTFIMARTYLDA------GLEPDALRYYF 369


>gi|325695108|gb|EGD37010.1| valine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 881

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|325916608|ref|ZP_08178871.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
 gi|325537162|gb|EGD08895.1| methionyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
          Length = 696

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 45/146 (30%), Gaps = 34/146 (23%)

Query: 194 WKRSTPMEPGWESP-----WG---RGRPG-----WHIE-----CSA-MSSHYLGKVFDIH 234
           W  +      W+       +G    GRPG     W        CS       +G+ FD H
Sbjct: 219 WLDTEGGLRAWDISRDAPYFGFQIPGRPGKYFYVWLDAPIGYLCSFKTLCAQMGEDFDTH 278

Query: 235 GGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-NGFLNLEGRKMSKSNGNF 285
                    HH       N       A        A   +H NG+L ++G KMSKS G F
Sbjct: 279 LVAGTQTELHHFIGKDIVNFHGLFWPAVLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTF 338

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +     L+             +R   
Sbjct: 339 VMARTFLDV------GLEPEALRYYF 358


>gi|229110002|ref|ZP_04239580.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
 gi|228673463|gb|EEL28729.1| Lysyl-tRNA synthetase [Bacillus cereus Rock1-15]
          Length = 517

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 35/113 (30%), Gaps = 14/113 (12%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+   M+VC  G +     HIGN R ++    + R+L       R+ +      
Sbjct: 10  ELIRKHPNK-EMFVCASGISPSGSVHIGNFREIVTTYFVVRVLQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACL 117
             R +    D    +     P   I D     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|217418703|ref|ZP_03450210.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
 gi|217398007|gb|EEC38022.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 576]
          Length = 737

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 62  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 113

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 114 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 169



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 528 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 580

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 581 RRQRAFVARLWAFVHRVAETEAGIAAAHD 609


>gi|15901494|ref|NP_346098.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|111658560|ref|ZP_01409223.1| hypothetical protein SpneT_02000316 [Streptococcus pneumoniae
           TIGR4]
 gi|148997709|ref|ZP_01825273.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|168575153|ref|ZP_02721116.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|307068285|ref|YP_003877251.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|263511608|sp|P0CB61|SYI_STRPN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|14973150|gb|AAK75738.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
 gi|147756208|gb|EDK63250.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
 gi|183578897|gb|EDT99425.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
 gi|306409822|gb|ADM85249.1| Isoleucyl-tRNA synthetase [Streptococcus pneumoniae AP200]
 gi|332199688|gb|EGJ13763.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|119494751|ref|ZP_01624779.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452005|gb|EAW33233.1| isoleucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 490

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 2/125 (1%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           +      LG   D++  G D       + +  S           +  H   L+ +G KMS
Sbjct: 139 AVAKQRGLGYPVDMYLEGSDQHRGWFNSSLLTSVANYGHAPYKTVLTHGFVLDEKGHKMS 198

Query: 280 KSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +    ++E  K   +   + A ++RL +    Y   +      L +   +  K 
Sbjct: 199 KSLGNVVDPAIVIEGGKNQQKEPPYGADILRLWVSSVDYSTDVPLGGNILKQMSDIYRKI 258

Query: 338 PQTST 342
             TS 
Sbjct: 259 RNTSR 263


>gi|161523963|ref|YP_001578975.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351276|ref|YP_001946904.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|254782377|sp|A9AGN6|SYI_BURM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|160341392|gb|ABX14478.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335298|dbj|BAG44368.1| isoleucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGVDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|26341092|dbj|BAC34208.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S           + +H   L  +G KMSKS GN I  + ++   K   +   + A ++R 
Sbjct: 639 SVATRSKAPFRTVMVHGFTLGEKGEKMSKSLGNVINPDTIISGGKDHSKEPPYGADILRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L+ A   +SK   T
Sbjct: 699 WIAESNVFTEMTIGPSVLSAARDDISKLRNT 729


>gi|71083063|ref|YP_265782.1| leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
 gi|71062176|gb|AAZ21179.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 844

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 47/154 (30%), Gaps = 20/154 (12%)

Query: 6   KIYNT-LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           K++++ L++   +F  ++     M+   P      H+G+ R   + DVL R         
Sbjct: 21  KVFSSKLDKTKKKFYCLE-----MF---PYPSGKIHMGHVRNYTIGDVLARYKTLQGYN- 71

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---TH 121
            V +              ARQ       N      T  N +       +L          
Sbjct: 72  -VLHPMGWDSFGMPAENAARQN------NLDPKTWTESNIKTMRSQLKKLGLSIDWDKEI 124

Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              + ++         ++   G  Y   N + +D
Sbjct: 125 STCSEDYYKHQQEFFLDLYDKGLVYRKENYVNWD 158


>gi|58617231|ref|YP_196430.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58416843|emb|CAI27956.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 601

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  DVL  LL     E    Y  N       ++  +        +
Sbjct: 159 PT--GPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLVESVYLRYKEVL 216

Query: 93  NDAISIITSKNTQQFVKDTTRL 114
            + I I +      ++KD  +L
Sbjct: 217 GENIVIGSGLYPGLYLKDIGKL 238


>gi|15903545|ref|NP_359095.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116515942|ref|YP_816928.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae D39]
 gi|81449524|sp|Q8DNW4|SYI_STRR6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|122278226|sp|Q04JB0|SYI_STRP2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|15459163|gb|AAL00306.1| Isoleucyl-tRNA synthetase [Streptococcus pneumoniae R6]
 gi|116076518|gb|ABJ54238.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae D39]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|315453125|ref|YP_004073395.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179]
 gi|315132177|emb|CBY82805.1| methionyl-tRNA synthetase [Helicobacter felis ATCC 49179]
          Length = 615

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 67/350 (19%), Positives = 120/350 (34%), Gaps = 84/350 (24%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A    + D+L +       +    ++   TD   + I ++  +H   P+  
Sbjct: 12  VNDVPHLGHAYTTFIADMLKKYYALRADD---VFLLTGTDEHGQKIAQSALKHQVSPL-- 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                 SK + +F             H  R T+  H+  + Y  + ++  G  Y+   + 
Sbjct: 67  ---EYASKISSKFRDQWDFFGIDY-DHFIRTTDDSHMFAVQYAFEAMLARGDIYKGTYKG 122

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH-------KKNPADFILWKRSTPMEPGWE 205
            +   S  ++ +   R  D Q+  + + E+ +       +    DF   K    + P + 
Sbjct: 123 AYCV-SCESFVTGEARCPDCQRETSILEEESYFFALSKYQDRLLDFYA-KNPKTILPTYR 180

Query: 206 S---------------------PWGRGRPG-----------WHIEC----SAMSSHYLGK 229
           +                      WG   P            W        SA+     GK
Sbjct: 181 THEVLRFIEQGLHDLSITRTSFEWGIKLPKNLNDPKHVVYVWLDALLNYVSALGYPNGGK 240

Query: 230 --VFD--IHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKMSKSN 282
              FD  IH  G D++  H     A    A  +            +G+  +EG KMSKS 
Sbjct: 241 MGYFDHAIHVVGKDILRFH-----AIYWPAFLMSLELPLFKHLCVHGWWTIEGVKMSKSI 295

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE-PI----DFTVQRL 327
           GN +    +        +++   V+R  +L    RE P+    DF+ + L
Sbjct: 296 GNVLCAQSI-------AQTYGRDVLRYFLL----REVPLGQDGDFSQEAL 334


>gi|313471900|ref|ZP_07812392.1| valine--tRNA ligase [Lactobacillus jensenii 1153]
 gi|313449025|gb|EEQ68181.2| valine--tRNA ligase [Lactobacillus jensenii 1153]
          Length = 883

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 11/133 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ P D   W++   +   W S   W     GW  E +     Y      +   G D+I
Sbjct: 432 GEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFKRYFPTNALV--TGYDII 489

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS    + +   ++ +H    + +GRKMSKS GN I   ++++        
Sbjct: 490 FFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMDVID-------K 542

Query: 302 WPAPVIRLAMLMT 314
           + A  +R  +L  
Sbjct: 543 YGADALRWFLLNG 555


>gi|271499792|ref|YP_003332817.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343347|gb|ACZ76112.1| methionyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 676

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 70/186 (37%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKADTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 R   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------RHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  Q     A    + +       A   I+ + ++   ++++  
Sbjct: 400 INKRFDGQLADSLADPALYQTFIDAAHTIAEAYSSRESGKAIREIMALADLANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|238855288|ref|ZP_04645607.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260664646|ref|ZP_05865498.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|282932419|ref|ZP_06337844.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|238832180|gb|EEQ24498.1| valine--tRNA ligase [Lactobacillus jensenii 269-3]
 gi|260561711|gb|EEX27683.1| valyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
 gi|281303368|gb|EFA95545.1| valine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 879

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 53/133 (39%), Gaps = 11/133 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ P D   W++   +   W S   W     GW  E +     Y      +   G D+I
Sbjct: 428 GEEAPKDIENWRQDEDVLDTWFSSALWPFSTLGWPDENAEDFKRYFPTNALV--TGYDII 485

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS    + +   ++ +H    + +GRKMSKS GN I   ++++        
Sbjct: 486 FFWVSRMIFQSLHFTKQKPFDHVVLHGLIRDEQGRKMSKSLGNGIDPMDVID-------K 538

Query: 302 WPAPVIRLAMLMT 314
           + A  +R  +L  
Sbjct: 539 YGADALRWFLLNG 551


>gi|260804683|ref|XP_002597217.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
 gi|229282480|gb|EEN53229.1| hypothetical protein BRAFLDRAFT_203583 [Branchiostoma floridae]
          Length = 960

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 9/110 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D HGG         ++ +  S          ++++H   +  +G KMSKS GN +  N +
Sbjct: 572 DQHGGWF-------QSSLLTSVAVTGSAPYRSVFVHGFAMAEDGTKMSKSLGNVVDPNLV 624

Query: 292 LETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           +   K   +   + A V+R  +  +     +      L  A   + K  +
Sbjct: 625 VSGGKNKDKHPAYGADVLRWWVAGSDVHSHVYIGNNILNSARDSVLKVRR 674


>gi|126459305|ref|YP_001055583.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|166231634|sp|A3MU00|SYL_PYRCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|126249026|gb|ABO08117.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 946

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 3/60 (5%)

Query: 17 EFQA-IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           F+    P   + ++     Y     HIG+ R  +V DV+ R  R+           + T
Sbjct: 24 VFEPSPQPGRPKFFITAAYPYPNGTIHIGHGRTYLVADVMARFRRHLGYNVLFPMAFHYT 83



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 7/73 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         EK     + NG++  EG KMSKS  N + +++ +   
Sbjct: 597 SGKDLIPNHLTFFIFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVLPLDKAVAL- 655

Query: 296 KFGGRSWPAPVIR 308
                 +    +R
Sbjct: 656 ------YGPDPLR 662


>gi|77747705|ref|NP_779783.2| methionyl-tRNA synthetase [Xylella fastidiosa Temecula1]
 gi|307578469|gb|ADN62438.1| methionyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
           GB514]
          Length = 690

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 16/103 (15%)

Query: 219 CSA-MSSHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-N 268
           CS       +G+ FD H         HH       N  A    A        A   +H N
Sbjct: 261 CSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPAVLHGTGHRAPTRLHVN 320

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           G+L ++G KMSKS G FI     L+             +R   
Sbjct: 321 GYLTVDGAKMSKSRGTFIMARTYLDA------GLEPDALRYYF 357


>gi|313673045|ref|YP_004051156.1| isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
 gi|312939801|gb|ADR18993.1| Isoleucyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
           19672]
          Length = 931

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 7/86 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            +     +  H   ++ +GRKMSKS GN +   E++E        + A ++RL +    Y
Sbjct: 589 GVAPYKEVLTHGFVVDGKGRKMSKSLGNVVKPQEIIE-------KYGAEILRLWVAAEDY 641

Query: 317 REPIDFTVQRLTEAEILLSKWPQTST 342
            E +  +   +        K   T+ 
Sbjct: 642 TEDVRISEDIIKRLVESYRKIRNTAR 667


>gi|303229983|ref|ZP_07316757.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515349|gb|EFL57317.1| isoleucine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 944

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          ++  H   ++ EGRKMSKS GN +  +++++        + A V+RL +
Sbjct: 591 AVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDV-------YGADVMRLWV 643

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   + +   +  K   T           L    +D N
Sbjct: 644 SSADYQADVRLSKDIVKQLSEVYRKIRNTFR--------FLLGNLDDFN 684


>gi|302024601|ref|ZP_07249812.1| leucyl-tRNA synthetase [Streptococcus suis 05HAS68]
          Length = 767

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 25/122 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 543 AKMSKSLKNVVNPDDVVE-------QFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 595

Query: 335 SKWPQ-------TSTSKGIID-------PAVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +        + + G +D         V   + +   NT  AI  L      + K  
Sbjct: 596 DRVYRLLTTKELAAENSGALDKVYNETVKTVTEHIEDLKFNT--AIAQLMIFVNAANKED 653

Query: 380 DL 381
            L
Sbjct: 654 KL 655


>gi|268319720|ref|YP_003293376.1| hypothetical protein FI9785_1249 [Lactobacillus johnsonii FI9785]
 gi|262398095|emb|CAX67109.1| valS [Lactobacillus johnsonii FI9785]
          Length = 879

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          ++ +H    + 
Sbjct: 460 GWPDEDSEDFKRYFPTNTLV--TGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDP 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +GRKMSKS GN +   ++++        + A  +R  +L  
Sbjct: 518 QGRKMSKSLGNGVDPMDVVD-------EYGADALRWFLLNG 551


>gi|256827073|ref|YP_003151032.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583216|gb|ACU94350.1| isoleucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 948

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 57/184 (30%), Gaps = 33/184 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A       N+      ++  G KMSKS GN I   ++          + A V+RL +  T
Sbjct: 595 AFGQAPYKNVICCGFTVDENGEKMSKSKGNGIDPAQV-------ANKYGADVLRLWVAST 647

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---AIQA 367
            Y   +      L        ++  T      S    DP   +    D    +   A+  
Sbjct: 648 DYSVDVSVGESILARTSDAYRRFRNTFRFLLGSLADFDPETDAVASFDSLLPADQWALVR 707

Query: 368 LHKLARESTKNHDLLP---IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
           L +L  +    +DL     +F A                     +  L    L  LK + 
Sbjct: 708 LARLLDDVNAGYDLYQYHRVFRAL----------------YDYVVGDLSAVYLDALKDRL 751

Query: 425 FSSA 428
           ++ A
Sbjct: 752 YAEA 755


>gi|253995955|ref|YP_003048019.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253982634|gb|ACT47492.1| leucyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 813

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTH 315
             E   N+ +  G +  EG KMSKS GN +   EL++T       + A   RL M+    
Sbjct: 552 NDEPFTNL-LTQGMVLKEGTKMSKSKGNTVDPQELIDT-------YGADTARLFMMFAAP 603

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTS 341
             + +++    +  A   L +  Q +
Sbjct: 604 PEQSLEWADSGVQGAHRFLRRLWQAT 629


>gi|313125097|ref|YP_004035361.1| valyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312291462|gb|ADQ65922.1| valyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 870

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/91 (15%), Positives = 29/91 (31%), Gaps = 9/91 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PTV    H G+A    + D + R  R    E    +     D       + +  ++   Q
Sbjct: 45  PTVSGSLHWGHAYGFTLQDFVARFNRMRGKEVFFPF--GFDDNGIASERLTEDELDVRHQ 102

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           ++      +    +  +   +F +    L  
Sbjct: 103 DYDRREFQEMCREVCEQYEAEFTEKMQNLGI 133



 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 49/131 (37%), Gaps = 8/131 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G D+I     + + +           ++ I+   L+    KMSKS GN ++ +
Sbjct: 491 PFDVRPQGHDIISFWLFHTVVKCYEHTGEVPFDSVMINGMVLDENREKMSKSKGNVVSPD 550

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           E++         +P    R     +   + + ++ + L   E LL K    S     +  
Sbjct: 551 EVMS-------KYPVDAARYWAAGSAVGDDLPYSEKGLRAGEKLLRKLWNASKLVDSLSE 603

Query: 350 AVLSALY-NDL 359
               +   +DL
Sbjct: 604 DAPESFDHDDL 614


>gi|189083248|sp|A0KN87|SYL_AERHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 51/143 (35%), Gaps = 48/143 (33%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           IH+G       KMSKS  N I    ++E        + A  +RL M+      P    ++
Sbjct: 613 IHSGM-----TKMSKSKNNGIDPQLMVER-------YGADTVRLFMMFA---SPAEMTLE 657

Query: 322 FTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSAL------------------YND-- 358
           ++   +  A+  L +  + +    S G+     ++AL                   +D  
Sbjct: 658 WSDSGVEGAQRFLRRLWRITFEHVSAGVAPALNVAALSVDQKAVRRELHKTIAKVSDDVG 717

Query: 359 ----LNTVSAIQALHKLARESTK 377
                NT  AI A+ +L     K
Sbjct: 718 RRQTFNT--AIAAIMELMNNLAK 738


>gi|167636213|ref|ZP_02394517.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170688689|ref|ZP_02879894.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254687052|ref|ZP_05150910.1| valyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254741600|ref|ZP_05199287.1| valyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167528434|gb|EDR91202.1| valyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170667375|gb|EDT18133.1| valyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 881

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +A    Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAADFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSFGNGIDPMDVIE-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|149021249|ref|ZP_01835495.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
 gi|147930350|gb|EDK81334.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|53721846|ref|YP_110831.1| tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|52212260|emb|CAH38282.1| putative tRNA synthetase [Burkholderia pseudomallei K96243]
          Length = 734

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 525 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 577

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 578 RRQRAFVARLWAFVHRVAETEAGIAAAHD 606


>gi|194398241|ref|YP_002038273.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|254782440|sp|B5E709|SYI_STRP4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|4009476|gb|AAC95446.1| isoleucine-tRNA synthetase [Streptococcus pneumoniae G54]
 gi|194357908|gb|ACF56356.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae G54]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|76817892|ref|YP_337561.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254189889|ref|ZP_04896398.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254263827|ref|ZP_04954692.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
 gi|76582365|gb|ABA51839.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|157937566|gb|EDO93236.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur
           52237]
 gi|254214829|gb|EET04214.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1710a]
          Length = 734

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 525 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 577

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 578 RRQRAFVARLWAFVHRVAETEAGIAAAHD 606


>gi|327479529|gb|AEA82839.1| isoleucyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 943

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D       +  H   ++  GRKMSKS GN I   E+ ++         A ++RL +  
Sbjct: 585 AIDGHAPYKGLLTHGFTVDENGRKMSKSLGNVIAPQEITDSMG-------ADILRLWVSA 637

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
           T Y   +  + Q L  +     +   T+ 
Sbjct: 638 TDYSGEMAVSKQILQRSADAYRRIRNTAR 666


>gi|317968656|ref|ZP_07970046.1| isoleucyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 984

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 8/142 (5%)

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W    G       IE ++  +  L    D++  G D      ++ +  S   +      
Sbjct: 573 SWAGVLGG------IEGTSSRAPQLHYPADLYLEGSDQHRGWFQSSLLTSVAVNGHAPYK 626

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPI 320
            +  H   L+ +GRKMSKS GN +    L+   K   +   + A V+RL +    Y   +
Sbjct: 627 RVLTHGFTLDEKGRKMSKSLGNVVDPAVLVSGGKNQKQEPPYGADVLRLWVSSVDYSADV 686

Query: 321 DFTVQRLTEAEILLSKWPQTST 342
                 + +   +  K   T+ 
Sbjct: 687 PLGPGIVKQLADVYRKVRNTAR 708


>gi|303230916|ref|ZP_07317660.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302514429|gb|EFL56427.1| isoleucine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 944

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          ++  H   ++ EGRKMSKS GN +  +++++        + A V+RL +
Sbjct: 591 AVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDV-------YGADVMRLWV 643

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   + +   +  K   T           L    +D N
Sbjct: 644 SSADYQADVRLSKDIVKQLSEVYRKIRNTFR--------FLLGNLDDFN 684


>gi|295697794|ref|YP_003591032.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295413396|gb|ADG07888.1| arginyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 557

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 53/191 (27%), Gaps = 53/191 (27%)

Query: 12  ERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
            R   EF + +P+               HIG+AR     D L R+L +   E    Y  N
Sbjct: 121 SRVQVEFVSANPT------------GRLHIGHARGAAYGDALCRILEWDGYEVQREYYIN 168

Query: 72  ------------------------ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
                                   +   DD    R   E     + +        + ++ 
Sbjct: 169 DAGNQVHNLAISLEARYFQALGRDVPMPDDGYYGRDVVELAERLVREEGDRYAQMSEEKR 228

Query: 108 VK----------------DTTRLACLAPTHQ-PRATNHIPQMIYLIQNIILHGHAYEANN 150
            +                D TR           RA      +   ++ +   G  YEA+ 
Sbjct: 229 YEALKQKGLEAMLQQIRDDLTRFRVRFDRWFSERALYESGAVEETVEELRRRGWVYEADG 288

Query: 151 EIIFDTSSIPN 161
            + F +++  +
Sbjct: 289 ALWFRSTAFGD 299


>gi|291544322|emb|CBL17431.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Ruminococcus sp. 18P13]
          Length = 802

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 47/138 (34%), Gaps = 25/138 (18%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
              + E       H   L  +G+KMSKS GN I  +E++         + A  +RL  M 
Sbjct: 557 AVSQKEPYMRRTSHGMILGEDGQKMSKSRGNVINPDEVVA-------QYGADTLRLYEMF 609

Query: 313 MTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YND---- 358
           +  + +   ++   +   +  L +        T      P   + +         D    
Sbjct: 610 IGDFEKTAPWSPSSIRGCKRFLDRVWALQDMLTDGEEYRPETRALMHKTIKKVSEDIENL 669

Query: 359 -LNTVSAIQALHKLARES 375
             NT  AI ++  L  E 
Sbjct: 670 KFNT--AIASMMALINEI 685



 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 37/123 (30%), Gaps = 15/123 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+ RP    D++ R  +       V +              A +           +I+
Sbjct: 49  HIGHPRPYTAMDIVSR--KRRLEGYNVLFPMGWDAFGLPTENYAIKNKIH------PAIV 100

Query: 100 TSKNTQQFVKDTTRLACLAP-THQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIF 154
           T  N   F      L        +   T+  P+     Q     +   G AY+    + +
Sbjct: 101 TKNNIAHFKAQLQSLGLSFDWDREINTTD--PEYFKWTQWIFLQMFKKGLAYKKEMSVNW 158

Query: 155 DTS 157
            TS
Sbjct: 159 CTS 161


>gi|229592789|ref|YP_002874908.1| leucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511549|sp|C3K2L2|SYL_PSEFS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|229364655|emb|CAY52580.1| leucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 868

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 38/140 (27%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  QPGKETFYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +  N A +  T +N          L  LA       T   P      Q  
Sbjct: 87  ENAA------MKNNVAPAKWTYENIAYMKNQLRSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y+ +  + +D
Sbjct: 140 FTRLFEKGVIYKKSGTVNWD 159


>gi|224476847|ref|YP_002634453.1| leucyl-tRNA synthetase (fragment 2) [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421454|emb|CAL28268.1| truncated leucyl-tRNA synthetase (fragment 2) [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 490

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 56/178 (31%), Gaps = 33/178 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 209 PVDLYIGGVEHAVLHLLYARFWHKVLYDMGVVPTKEPFQKLFNQGMILGEGNEKMSKSRG 268

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++       RS  A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 269 NVVNPDDIV-------RSHGADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLLI 321

Query: 342 TSKGIIDPAVLSALY---------------NDLNTVS---AIQALHKLARESTKNHDL 381
              G +   V+                    D  T++   AI  L     ES K   L
Sbjct: 322 NEDGSLTSKVVDTDDKSLQKVYNQTVKKVTEDFETLNFNTAISQLMVFINESYKAEQL 379


>gi|221202477|ref|ZP_03575508.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221208066|ref|ZP_03581071.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221171969|gb|EEE04411.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221177650|gb|EEE10066.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 41/140 (29%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D    + Y      Y     H+G+ R   + DV+YR LR       +          D  
Sbjct: 29  DAQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAF 82

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ ++      +  T  N          +  LA           P      Q  
Sbjct: 83  GMPA--ENAAMANGVPPAKWTYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY+    + +D
Sbjct: 140 FLKMLEKGIAYKKTGTVNWD 159


>gi|254167740|ref|ZP_04874590.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289597141|ref|YP_003483837.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197623268|gb|EDY35833.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|289534928|gb|ADD09275.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 939

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 7/98 (7%)

Query: 18  FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F+    +  + ++  P  Y     HIG+ R   + D++ R  R            ++T  
Sbjct: 20  FEPKVENKKKFFITVPYPYMSGSLHIGHGRTFTMGDIIARFKRLQGYNVLFPMAFHVTGT 79

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
               I  A +      IN     +  +  + +  D  R
Sbjct: 80  PVLAIADAIKAGDEKVIN-----LYKEYVRIYEDDEDR 112


>gi|47567080|ref|ZP_00237797.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47570323|ref|ZP_00240969.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553008|gb|EAL11413.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47556398|gb|EAL14732.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHKEFERCFRSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|325957776|ref|YP_004289242.1| leucyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329208|gb|ADZ08270.1| leucyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 958

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DL+  H    +         +K     +  G   LEG KMS S GN I + 
Sbjct: 575 PLDWRLSAKDLVGNHLSFHMFHHSAIFPRDKWPQGIVVFGMGLLEGNKMSSSKGNIIMLE 634

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT 314
           + + T       + + VIRL ++ +
Sbjct: 635 DAINT-------YGSDVIRLFLMSS 652



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 32/114 (28%), Gaps = 20/114 (17%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE---KCVTYVRNITDID 76
             +   + + V  P      H+G+ R   V DV  R  R            +V     + 
Sbjct: 24  PNNKKKVYVTVAYPYPSGAMHVGHGRTYTVPDVYARFKRMQGYNVLFPMGWHVTGAPVVG 83

Query: 77  DKIIERARQEHPSIPIN---------------DAISIITSKNTQQFVKDTTRLA 115
             I +R +++ P                         I     +++    TR+ 
Sbjct: 84  --IAKRIQRQDPWTIDIYKNIHKVPESELAKFTDPEYIVKYFGEEYHDVMTRMG 135


>gi|323144575|ref|ZP_08079164.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
 gi|322415651|gb|EFY06396.1| isoleucine--tRNA ligase [Succinatimonas hippei YIT 12066]
          Length = 939

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 7/116 (6%)

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            + G   D++  G D       + +  S           +  H   ++  GRKMSKS GN
Sbjct: 553 EFKGHTADMYLEGSDQHRGWFMSSLMLSVAMKDKAPYRQVLTHGFTVDGNGRKMSKSLGN 612

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            I    +++          A V+RL +  T Y   I  + +    +     +   T
Sbjct: 613 VIAPQSVMDKLG-------ADVLRLWVASTDYTGEIAVSDEIFKRSSDSYRRVRNT 661


>gi|288818154|ref|YP_003432502.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787554|dbj|BAI69301.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751755|gb|ADO45238.1| isoleucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 922

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 15/138 (10%)

Query: 221 AMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           A     LG    D++  G D      ++ + +S  +        +  H   ++ +GRKMS
Sbjct: 541 ACVLRRLGIDTADMYLEGSDQHRGWFQSSLLESVASYSKAPYRAVLTHGFTVDEQGRKMS 600

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN I+  E++       + + A ++RL ++        D+T   +   + +L +  +
Sbjct: 601 KSLGNVISPQEII-------KQYGADILRLWVVSE------DYTED-VKLGKSILQRIVE 646

Query: 340 TSTSKGIIDPAVLSALYN 357
                      +L+ LY+
Sbjct: 647 DYKKIRNTLRFLLANLYD 664


>gi|288817914|ref|YP_003432261.1| glutamyl- and glutaminyl-tRNA synthetase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787313|dbj|BAI69060.1| glutamyl- and glutaminyl-tRNA synthetase [Hydrogenobacter
           thermophilus TK-6]
 gi|308751512|gb|ADO44995.1| glutamyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 470

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 37/115 (32%), Gaps = 27/115 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P+   + H+GNAR  I   +  R  R  +          I  I+D  +ER+         
Sbjct: 8   PSPTGYLHLGNARTAIFSYLFARHHRGKF----------ILRIEDTDLERS--------- 48

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                  T +     ++D   L         R +          Q +I  GHAY 
Sbjct: 49  -------TKEFEAMLLEDLKWLGLDWDEFY-RQSERFDIYREYAQRLIELGHAYP 95


>gi|238019859|ref|ZP_04600285.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
 gi|237863383|gb|EEP64673.1| hypothetical protein VEIDISOL_01735 [Veillonella dispar ATCC 17748]
          Length = 944

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          ++  H   ++ EGRKMSKS GN +  +++++        + A V+RL +
Sbjct: 591 AVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDV-------YGADVMRLWV 643

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   + +   +  K   T           L    +D N
Sbjct: 644 SSADYQADVRLSKDIVKQLSEVYRKIRNTFR--------FLLGNLDDFN 684


>gi|221211478|ref|ZP_03584457.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168839|gb|EEE01307.1| isoleucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGVDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|254780445|ref|YP_003064858.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040122|gb|ACT56918.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 963

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 13/91 (14%)

Query: 232 DIHGGGLDLI---FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D++  G D     F H    + +SC         ++  H   ++  G KMSKS GN +  
Sbjct: 588 DVYLEGSDQHRGWFQH---SLLESCATRGSTPFTSLITHGFSVDENGEKMSKSKGNVVFP 644

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
            E++           A V+R   + + Y + 
Sbjct: 645 EEIISESG-------ADVLRYWAVNSDYHDD 668


>gi|156538451|ref|XP_001606422.1| PREDICTED: similar to GH13807p [Nasonia vitripennis]
          Length = 522

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 35/75 (46%), Gaps = 11/75 (14%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-- 312
           A  +E    ++ H+ +  ++G KMSKS GN ++  +         + +    +R  +L  
Sbjct: 274 AAGLEPPKTLFCHSHW-TVDGEKMSKSRGNVVSPFDA-------AQQFTTEGLRYFLLRD 325

Query: 313 MTHYREPIDFTVQRL 327
              + +  +++ +R+
Sbjct: 326 SVPHNDS-NYSTERV 339


>gi|161525901|ref|YP_001580913.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189349380|ref|YP_001945008.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|238687066|sp|A9AHA9|SYL_BURM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160343330|gb|ABX16416.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189333402|dbj|BAG42472.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 41/140 (29%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D    + Y      Y     H+G+ R   + DV+YR LR       +          D  
Sbjct: 29  DAQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAF 82

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ ++      +  T  N          +  LA           P      Q  
Sbjct: 83  GMPA--ENAAMANGVPPAKWTYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY+    + +D
Sbjct: 140 FLKMLEKGIAYKKTGTVNWD 159


>gi|115398550|ref|XP_001214864.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
 gi|114191747|gb|EAU33447.1| leucyl-tRNA synthetase, mitochondrial precursor [Aspergillus
           terreus NIH2624]
          Length = 983

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 46/156 (29%), Gaps = 24/156 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  R               D+   +   A     E+ +I      
Sbjct: 97  HMGHLRVYTISDVLARFYRMRGH-----------DVLHPMGWDAFGLPAENAAIERGIDP 145

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI 152
           +  T  N  +       ++      +  AT   P+     Q I       G AY+A   +
Sbjct: 146 AEWTRDNIARMKAQLRSISTSFDWDRELAT-CAPEFYEHTQRIFLKLYEKGLAYQAEALV 204

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                         +  ++D      R   K  + N
Sbjct: 205 NYDPVDKT----VLANEQVDANGFSWRSGAKVEQLN 236


>gi|109894991|sp|Q5FH87|SYR_EHRRG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
          Length = 576

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  DVL  LL     E    Y  N       ++  +        +
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQVDVLVESVYLRYKEVL 191

Query: 93  NDAISIITSKNTQQFVKDTTRL 114
            + I I +      ++KD  +L
Sbjct: 192 GENIVIGSGLYPGLYLKDIGKL 213


>gi|34395208|dbj|BAC83606.1| putative valyl-tRNA synthetase [Oryza sativa Japonica Group]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 66/179 (36%), Gaps = 34/179 (18%)

Query: 255 ADRIEKTANIWIH-----NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
                  + +++H     +  +N +GRKMSK+ GN I   + +       + +    +R 
Sbjct: 545 FTGTVPFSYVYLHGLIRDSEQVNFQGRKMSKTLGNVIDPLDTI-------KEYGTDALRF 597

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSA----LYNDLNTVS 363
            + M    + ++ + +RLT  +   +K         + + D +  +A    L N  +T +
Sbjct: 598 TLSMGTAGQDLNLSTERLTSNKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDTEA 657

Query: 364 AIQA-----------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++Q            LH+L    + ++D     +A+  I                 IE 
Sbjct: 658 SLQKLPLPESWVVTGLHELIDRVSTSYDKFFFGDAAREI-----YDFFWGDFADWYIEA 711


>gi|332201085|gb|EGJ15156.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|319937141|ref|ZP_08011548.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
 gi|319807507|gb|EFW04100.1| isoleucyl-tRNA synthetase [Coprobacillus sp. 29_1]
          Length = 910

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        +  H   L+ +G KMSKS GN +   +++         + A ++RL    
Sbjct: 570 AAHGCAPYKTVLSHGFVLDGKGNKMSKSLGNTVDPIKMVN-------QYGADILRLWATS 622

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT 340
             Y+  +  + + + +      K   T
Sbjct: 623 IAYQSDVRISDEIMKQVAENYRKMRNT 649


>gi|321250978|ref|XP_003191915.1| methionine-tRNA ligase [Cryptococcus gattii WM276]
 gi|317458383|gb|ADV20128.1| Methionine-tRNA ligase, putative [Cryptococcus gattii WM276]
          Length = 582

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 73/201 (36%), Gaps = 28/201 (13%)

Query: 18  FQAI-DPSNIR-MYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           F    DP+N +  YV  P  Y     HIG+   +++ DVL R  R    ++ V +     
Sbjct: 41  FTPEGDPANAKPFYVTTPIFYVNASPHIGHLHSLLLTDVLARFSRLRCPQRKVVFATGTD 100

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQ 131
           +   KI + A+         +    ++ +      ++  +LA  + T   R T   H+  
Sbjct: 101 EHGLKIQQAAKANGVGEQ--EFCDDVSQR-----FRNLAKLANASNTDFIRTTEPRHVKA 153

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTS--SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
           +      ++  G  Y+  +   +  S  S       ++R  D    G  +  +   +   
Sbjct: 154 VEQFWNTLVGSGDIYKGTHSGWYSISDESFYAASQVTKRPED----GKMIAIETGNE--- 206

Query: 190 DFILWKRSTPMEPGWESPWGR 210
             ++W      E  W+   G+
Sbjct: 207 --VIW----EEETNWKFRLGK 221


>gi|307709597|ref|ZP_07646050.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307619633|gb|EFN98756.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--- 367
                   +  ++  L++      K   T           L A  +D N T   +     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFNPTQDVVAYDEL 674

Query: 368 -------------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                        L K  R++  N + L I+ A  + + +++   +L+
Sbjct: 675 RSVDKYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLD 722


>gi|237508333|ref|ZP_04521048.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
 gi|235000538|gb|EEP49962.1| leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS) [Burkholderia
           pseudomallei MSHR346]
          Length = 734

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 525 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 577

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 578 RRQRAFVARLWAFVHRVAETEAGIAAAHD 606


>gi|229187283|ref|ZP_04314428.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|228596293|gb|EEK53968.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|261349806|ref|ZP_05975223.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|288860591|gb|EFC92889.1| isoleucine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 1090

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  + +H   L+  G+KMSKS GN ++  E++E        + A V+R  +L    
Sbjct: 612 GQVPYKKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIE-------KYGADVLRFYLLWAS- 663

Query: 317 REPID 321
            +P D
Sbjct: 664 -KPWD 667


>gi|196015686|ref|XP_002117699.1| hypothetical protein TRIADDRAFT_61696 [Trichoplax adhaerens]
 gi|190579739|gb|EDV19829.1| hypothetical protein TRIADDRAFT_61696 [Trichoplax adhaerens]
          Length = 1130

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 42/127 (33%), Gaps = 32/127 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN----GFLNLEGRKMSKSNGNF 285
            FD+   G DL+  H    +         E   + W  N    G L L   KMSK  GNF
Sbjct: 657 GFDLRSSGKDLLPNHLTYLLFNHVAIWPDEP--HRWPGNLRINGHLLLNSEKMSKQTGNF 714

Query: 286 ITI-------------------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +T+                    + +E   F  +     ++RL          +++T   
Sbjct: 715 LTLFESVDRFSADGMRLALADAGDSVEDANFVEKMADGGILRLYTF-------LEWTKDM 767

Query: 327 LTEAEIL 333
           L  A+  
Sbjct: 768 LELAKQN 774


>gi|171319741|ref|ZP_02908829.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171095013|gb|EDT40036.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGVDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|170697699|ref|ZP_02888787.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170137447|gb|EDT05687.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGVDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|168491459|ref|ZP_02715602.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225855089|ref|YP_002736601.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
 gi|237650665|ref|ZP_04524917.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
 gi|237822424|ref|ZP_04598269.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
 gi|254782444|sp|C1CFN0|SYI_STRZJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|183574218|gb|EDT94746.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
 gi|225723500|gb|ACO19353.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae JJA]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|148643401|ref|YP_001273914.1| isoleucyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|148552418|gb|ABQ87546.1| isoleucyl-tRNA synthetase, IleS [Methanobrevibacter smithii ATCC
           35061]
          Length = 1090

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  + +H   L+  G+KMSKS GN ++  E++E        + A V+R  +L    
Sbjct: 612 GQVPYKKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIE-------KYGADVLRFYLLWAS- 663

Query: 317 REPID 321
            +P D
Sbjct: 664 -KPWD 667


>gi|124485013|ref|YP_001029629.1| isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
 gi|166229749|sp|A2SPV6|SYI_METLZ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|124362554|gb|ABN06362.1| Isoleucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
          Length = 1066

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 12/84 (14%)

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           ++A S  A       ++ +H   L+ EG+KMSKS GN I   ++        + +   V+
Sbjct: 565 QLALSTIAFGKAPYKSVLMHGFALDAEGKKMSKSLGNVIAPEDV-------AKQFGVDVM 617

Query: 308 RLAMLMTHYREPID---FTVQRLT 328
           R  +L  +   P D   F+++ + 
Sbjct: 618 RQYILSAN--APWDDMRFSLEGVK 639


>gi|21227450|ref|NP_633372.1| arginyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|23822188|sp|Q8PX74|SYR_METMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|20905820|gb|AAM31044.1| Arginyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 569

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 17/132 (12%)

Query: 13  RKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           ++  +F    P   I +           H+G+ R  I+ D L R+LR    +  V Y  N
Sbjct: 102 KEKEKFGCGAPKDRILLEHTSANPNGPLHVGHIRNSIIGDTLARILRRAGYDVEVQYYVN 161

Query: 72  ITDIDDKI--IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
             D+  +I  +  A +         + S I     +                 P    +I
Sbjct: 162 --DMGRQIAVVSWACERFELDLSRKSDSAIADVYIKA--------NVEL-DKNP---GYI 207

Query: 130 PQMIYLIQNIIL 141
            ++  L++ +  
Sbjct: 208 KEIDALMEKVEA 219


>gi|115352610|ref|YP_774449.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322419|sp|Q0BCK8|SYI_BURCM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|115282598|gb|ABI88115.1| Isoleucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGVDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|71900625|ref|ZP_00682751.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
 gi|71729619|gb|EAO31724.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit, C-terminal [Xylella fastidiosa Ann-1]
          Length = 702

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 35/103 (33%), Gaps = 16/103 (15%)

Query: 219 CSA-MSSHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-N 268
           CS       +G+ FD H         HH       N  A    A        A   +H N
Sbjct: 273 CSFKTLCTRIGEDFDTHLRSGTTTELHHFIGKDIVNFHALFWPAVLHGTGHRAPTRLHVN 332

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           G+L ++G KMSKS G FI     L+             +R   
Sbjct: 333 GYLTVDGAKMSKSRGTFIMARTYLDA------GLEPDALRYYF 369


>gi|328957135|ref|YP_004374521.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673459|gb|AEB29505.1| isoleucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 929

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 41/139 (29%), Gaps = 16/139 (11%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA------ 83
           GP  Y     HIG+A   I  D++ R                  D     IE+A      
Sbjct: 55  GP-PYANGNIHIGHALNKISKDIIVRYKSMSGFRSPYVPGW---DTHGLPIEQALTNKGV 110

Query: 84  -RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNI 139
            R+E               +   +  +D  RL        P  T    +    I +   +
Sbjct: 111 KRKEMSLAEFRKLCEEYAWEQVNKQKEDFKRLGVAGEWDHPYVTLTKEYEEAQIRVFGKM 170

Query: 140 ILHGHAYEANNEIIFDTSS 158
              G+ Y+    I +  SS
Sbjct: 171 AEKGYIYKGLKPIYWSPSS 189


>gi|297537782|ref|YP_003673551.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
 gi|297257129|gb|ADI28974.1| leucyl-tRNA synthetase [Methylotenera sp. 301]
          Length = 836

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTH 315
             E   N+ +  G +  EG KMSKS GN +   EL++T       + A   RL M+    
Sbjct: 575 NDEPFINL-LTQGMVLKEGTKMSKSKGNTVDPQELIDT-------YGADTARLFMMFAAP 626

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTS 341
             + +++    +  A   L +  + S
Sbjct: 627 PEQSLEWADSGVEGANRFLRRLWKAS 652


>gi|296134048|ref|YP_003641295.1| valyl-tRNA synthetase [Thermincola sp. JR]
 gi|296032626|gb|ADG83394.1| valyl-tRNA synthetase [Thermincola potens JR]
          Length = 883

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I  +    +      ++IH   L+ +GRKMSKS GN +   E++
Sbjct: 483 VLVTGRDIIFFWVARMIFMAMEFMKEVPFREVFIHGLVLDAQGRKMSKSLGNGVDPIEVI 542

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           E        + A  +R  ++  +   P   + F  +RL       +K    S 
Sbjct: 543 E-------KYGADTLRFMLITGN--TPGNDLRFHFERLDNTRNFANKIWNASR 586


>gi|291001119|ref|XP_002683126.1| predicted protein [Naegleria gruberi]
 gi|284096755|gb|EFC50382.1| predicted protein [Naegleria gruberi]
          Length = 1051

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 24/139 (17%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A           AN     G++ + G KMSK  GNF
Sbjct: 661 PVDLRVSGKDLIKNHLTMFLYNHAAIFPDQMPGSIFAN-----GYVMVNGEKMSKQAGNF 715

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM---LMTHYREPIDFTVQRLTEAEILLS---KWPQ 339
           +T+  ++E        + A   RLA+     TH  +  +F       A + L+   +W +
Sbjct: 716 LTLQGVIEM-------YGADATRLALCDSGDTH--DDANFEQNNANSAVLKLNTFLEWIE 766

Query: 340 TSTSKGIIDPAVLSALYND 358
            + +KG +       L+ D
Sbjct: 767 ETLTKGDMRDEESEYLFAD 785


>gi|172061472|ref|YP_001809124.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|254782374|sp|B1YVA4|SYI_BURA4 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171993989|gb|ACB64908.1| isoleucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 945

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN +  +E+            A +IRL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGVDPHEVANRLG-------AEIIRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 665 LKRVTEGYRRIRNT 678


>gi|119181183|ref|XP_001241833.1| hypothetical protein CIMG_05729 [Coccidioides immitis RS]
          Length = 581

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   +++ D+L R             +   TD     I++A   H   PI  
Sbjct: 60  VNASPHVGHLYTLVLADILKRWQVLLGNNDA--QLLTGTDEHGIKIQQAAASHGLEPIK- 116

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N Q F     +       H  R T   H   + Y  + +   G+ Y A +E 
Sbjct: 117 ----LCDQNCQTFKDLAQKANVQH-DHFIRTTDPEHRDAVQYFWEMLDHRGYIYTAKHEG 171

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 172 WYSVSDETFY 181


>gi|327475194|gb|AEA77192.1| leucyl-tRNA synthetase [Exiguobacterium sp. EPVM]
          Length = 801

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 46/143 (32%), Gaps = 30/143 (20%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++++         A  +RL  M M   
Sbjct: 559 KEPFQKLYNQGMILGENNEKMSKSKGNVVNPDDIIKSHG-------ADTLRLYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK----WPQTSTSKGIIDPAV--------------LSALYND 358
              I ++   L  A   L +    + QT+                          AL   
Sbjct: 612 DAAIAWSTNGLDGARRFLDRVWRLFDQTALQDVAPTADFERTYHQTVKKVTEDYEALR-- 669

Query: 359 LNTVSAIQALHKLARESTKNHDL 381
            NT  AI  L     E+ K   L
Sbjct: 670 FNT--AISQLMVFINEAYKQDTL 690


>gi|315639610|ref|ZP_07894750.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315484571|gb|EFU75027.1| isoleucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 18/174 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +     +      L+ EGRKMSKS GN I   +++           A ++R
Sbjct: 565 ITTSVAINGVAPYKAVLSQGFTLDGEGRKMSKSLGNTILPEKVINQMG-------ADILR 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSA 364
           L +    Y   +  ++  L++   +  K   T      +    +P   S  Y DL +V  
Sbjct: 618 LWVSSVDYESDVRVSMDILSQVSEVYRKIRNTMRFLLANTEDFNPETDSVAYEDLRSVDK 677

Query: 365 IQA--LHKLAREST----KNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
                L+K+ +E      ++++ L I+    + L +++   +L+    +  IE 
Sbjct: 678 YMTVRLNKVVKEIREKGYESYNFLHIYRTVINFLTVDLSSFYLDFAKDVVYIEA 731


>gi|168486973|ref|ZP_02711481.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183570098|gb|EDT90626.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|148988705|ref|ZP_01820138.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
 gi|147925906|gb|EDK76981.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|134279208|ref|ZP_01765921.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|254193176|ref|ZP_04899611.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|134249627|gb|EBA49708.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|169649930|gb|EDS82623.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 734

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 525 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 577

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 578 RRQRAFVARLWAFVHRVAETEAGIAAAHD 606


>gi|83320001|ref|YP_424033.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|83283887|gb|ABC01819.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 509

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 15/122 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+A    + D+L R  +    E        +T  D+      + E+ +   N      
Sbjct: 19  HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEH---GQKIENKAKEANLTPLEY 70

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII----LHGHAYEANNEIIFD 155
            +   Q F    T+L         R T+        +Q I       G+ Y+   E I+ 
Sbjct: 71  LNPKVQAFKDLWTKLNIDY-DKFIRTTD--DYHQNTVQKIFTILLEKGYIYKGQYEGIYC 127

Query: 156 TS 157
            S
Sbjct: 128 VS 129


>gi|126445547|ref|YP_001062206.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126456148|ref|YP_001075169.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242312751|ref|ZP_04811768.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
 gi|126225038|gb|ABN88543.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|126229916|gb|ABN93329.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|242135990|gb|EES22393.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei 1106b]
          Length = 734

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 166



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 525 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 577

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 578 RRQRAFVARLWAFVHRVAETEAGIAAAHD 606


>gi|134294734|ref|YP_001118469.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|166230620|sp|A4JBI1|SYL_BURVG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|134137891|gb|ABO53634.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNTLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N          +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|184200670|ref|YP_001854877.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183580900|dbj|BAG29371.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 517

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R        T  +  TD         + +  +  +  
Sbjct: 16  PNGAPHIGHAYEAIAADTLVRFQRLDG---VATRFQTGTD-----EHGQKMQQTAEKLGT 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +   N+ +F +    L         R T  +H      L + +  +G  Y      
Sbjct: 68  TPRELADANSARFREMDDELGISY-DRFIRTTDEDHAAASQELWKRMEANGDIYLDTYAG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAYY 136


>gi|169832458|ref|YP_001695040.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|254782442|sp|B1I721|SYI_STRPI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|168994960|gb|ACA35572.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|168483471|ref|ZP_02708423.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|172043056|gb|EDT51102.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
 gi|332200218|gb|EGJ14291.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|163840682|ref|YP_001625087.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162954158|gb|ABY23673.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 898

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 18  FQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           F  +D     R YVC    Y     H+G+A   ++ DV+ R  +    +
Sbjct: 97  FAPLDDGSKERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFD 145


>gi|83648575|ref|YP_437010.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123726271|sp|Q2S9T9|SYI_HAHCH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|83636618|gb|ABC32585.1| isoleucyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 941

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 12/111 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +G KMSKS GN I   E++           A ++RL +
Sbjct: 580 AVAIKGKAPYRQVLTHGFTVDEKGHKMSKSLGNGIEPQEVMNKLG-------ADILRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDP-AVLSALYN 357
             T Y   +  +   L        +   TS     +    DP   + A+ +
Sbjct: 633 AATDYSAEMVLSKNILERTADSYRRIRNTSRFLLANINDFDPVKDMVAMDD 683


>gi|56961843|ref|YP_173565.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|56908077|dbj|BAD62604.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 655

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 13/128 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+    +  D + R  R    +     VR +T  D+      + E  +     +    
Sbjct: 20  HIGHTYTTVAGDAMARYKRLRGYD-----VRYLTGTDEH---GQKIEQKAKEKGISPLEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
           T++  +   +   +L         R T   H   M+  I + ++  G  Y    E  +  
Sbjct: 72  TNEMVKPIKELWKKLDISHDDF-IRTTEKRHTN-MVEKIFEQLVEQGDIYLGEYEGWYCV 129

Query: 157 SSIPNYGS 164
           S    YG 
Sbjct: 130 SDETFYGE 137


>gi|87301916|ref|ZP_01084750.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
 gi|87283484|gb|EAQ75439.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 5701]
          Length = 997

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 2/67 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    L+E  K   +   + A V+RL
Sbjct: 617 SVAVNGHAPYRRVLTHGFTLDEKGRKMSKSLGNVVDPAVLVEGGKNEKQQPAYGADVLRL 676

Query: 310 AMLMTHY 316
            +    Y
Sbjct: 677 WVSSVDY 683


>gi|254253255|ref|ZP_04946573.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124895864|gb|EAY69744.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR LR       +          D     A  E+ ++      +  
Sbjct: 49  HMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAFGMPA--ENAAMANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N +        +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIEYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|332008381|gb|AED95764.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1279

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG--GRSWPAPVIRL 309
           S         + +  H   L+ +G KMSKS GN +    ++E  K      ++ A V+RL
Sbjct: 884 SIATQGKAPYSAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKNSKDAPAYGADVMRL 943

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y   +    Q L +   +  K   T
Sbjct: 944 WVSSVDYTGDVLIGPQILRQMSDIYRKLRGT 974


>gi|329121488|ref|ZP_08250112.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
 gi|327469403|gb|EGF14873.1| isoleucine--tRNA ligase [Dialister micraerophilus DSM 19965]
          Length = 937

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ EGRKMSKS GN +    ++         + A V+RL +
Sbjct: 592 SVAVNGKAPYKALLTHGFTVDGEGRKMSKSVGNVVAPQTIINR-------YGADVMRLWI 644

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+  +  + + + +   +  K   T
Sbjct: 645 ASSDYQGDVRLSDKIIKQMSDVYRKIRNT 673


>gi|313891340|ref|ZP_07824956.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
 gi|313120115|gb|EFR43291.1| isoleucine--tRNA ligase [Dialister microaerophilus UPII 345-E]
          Length = 937

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ EGRKMSKS GN +    ++         + A V+RL +
Sbjct: 592 SVAVNGKAPYKALLTHGFTVDGEGRKMSKSVGNVVAPQTIINR-------YGADVMRLWI 644

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+  +  + + + +   +  K   T
Sbjct: 645 ASSDYQGDVRLSDKIIKQMSDVYRKIRNT 673


>gi|307127869|ref|YP_003879900.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306484931|gb|ADM91800.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|332072827|gb|EGI83308.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|225861487|ref|YP_002742996.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|254782446|sp|C1CSS4|SYI_STRZT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225727306|gb|ACO23157.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
 gi|327389845|gb|EGE88190.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|221213180|ref|ZP_03586155.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221166632|gb|EED99103.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 864

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 41/140 (29%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D    + Y      Y     H+G+ R   + DV+YR LR       +          D  
Sbjct: 29  DAQKPKFYCVSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGYNVLMPMGW------DAF 82

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A  E+ ++      +  T  N          +  LA           P      Q  
Sbjct: 83  GMPA--ENAAMANGVPPAKWTYDNIDYMKGQMQSMG-LAIDWSREIATCKPDYYKWNQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              ++  G AY+    + +D
Sbjct: 140 FLKMLEKGIAYKKTGTVNWD 159


>gi|209966833|ref|YP_002299748.1| isoleucyl-tRNA synthetase [Rhodospirillum centenum SW]
 gi|209960299|gb|ACJ00936.1| isoleucyl-tRNA synthetase IleS [Rhodospirillum centenum SW]
          Length = 962

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 38/90 (42%), Gaps = 18/90 (20%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G KMSKS GN +   +++       + + A ++RL +
Sbjct: 601 SCGTRGRAPYEAVLTHGFTLDQNGEKMSKSKGNTVAPQDVI-------KEFGADILRLWV 653

Query: 312 LMTHYREPIDFTVQ-----RLTEAEILLSK 336
           + T      DFT       ++ +A+  L +
Sbjct: 654 VST------DFTEDQRIGPKILQAQADLYR 677


>gi|194246647|ref|YP_002004286.1| isoleucyl-tRNA synthetase [Candidatus Phytoplasma mali]
 gi|193807004|emb|CAP18439.1| Isoleucyl-tRNA synthetase [Candidatus Phytoplasma mali]
          Length = 912

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 7/109 (6%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D       + +  S           +  H   L+ +G+KMSKS GN I   ++
Sbjct: 550 DIYLEGADQYRGWFNSSLIISTAVYNHSPYKQVITHGFVLDGKGQKMSKSLGNIIDPLKI 609

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           ++ K        A ++RL +  T+Y   +      L + E +  K   T
Sbjct: 610 IQKKG-------ADILRLWIATTNYNIDVRVDENILKQTEEIYRKIRNT 651


>gi|190150200|ref|YP_001968725.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
 gi|238692395|sp|B3H1L1|SYL_ACTP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189915331|gb|ACE61583.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
           str. AP76]
          Length = 834

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 48/159 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND----- 358
             +  A+  L +          + +   +D A                ++ + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKN-----HDLLPIFNASAHI 391
             NT  AI A+ +L  + TK       D   +  A + +
Sbjct: 721 TFNT--AIAAIMELMNKLTKAPLENEQDKAVMAEALSAV 757


>gi|189485731|ref|YP_001956672.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287690|dbj|BAG14211.1| arginyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 552

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 92/327 (28%), Gaps = 71/327 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+ R   + D + R+L++   +    Y  N  D  ++++  ++        
Sbjct: 131 PT--GPLHIGHGRGAAIGDSIVRILKHLGYDVIKEYYLN--DYGNQMLVLSKSVEIRFRQ 186

Query: 92  -INDAISIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
              + I          ++ D  +                  + +++  I    L   A E
Sbjct: 187 LKGEKIDFPADHYQGSYIIDIAKRLISENRDIDEVNFKYESVKEILSWI-KDDLKDFAVE 245

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-- 205
            + +   +T    +     + ++D+           + K      LW  ST      +  
Sbjct: 246 FD-DWFSETKITADKDKNGKTEVDKTCEYLLAKGNAYVKGD---ALWLASTKFGDDKDRV 301

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN-------EIAQSCCADRI 258
                GR             YL           D    HH+N       ++A    AD  
Sbjct: 302 LKRSDGR-----------YTYL---------ASDAA--HHKNKFERGFTKLANLWGADHH 339

Query: 259 EKTANIWIHNGFLNLEGRK-------------------MSKSNGNFITINELLETKKFGG 299
              A I      L  +                      MS   G FIT+ E+ +      
Sbjct: 340 GYVARIKACVQMLGFDKEALDIILYQFVSLVRNGLSVTMSTRTGEFITLKEVADEVGK-- 397

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQR 326
                   R   LM      I+F ++ 
Sbjct: 398 -----DACRFFFLMRAPDSQIEFDLEL 419


>gi|220918010|ref|YP_002493314.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955864|gb|ACL66248.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 832

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 43/131 (32%), Gaps = 19/131 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+AR   + D L R LR               D+   I   A     E+ +
Sbjct: 44  PYPSGAMHMGHARVYTIGDALARHLRMRGF-----------DVLHPIGFDALGLPAENAA 92

Query: 90  IPINDAISIITSKNTQQFVKDTTRLAC----LAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           I      +  T +N   F  +  RL              A+ +     + +  ++  G A
Sbjct: 93  IKDGRHPAERTRENVVSFRAEMKRLGYSFDWERELVTADASYYRWNQWFFL-KLLEKGIA 151

Query: 146 YEANNEIIFDT 156
           Y    ++ + T
Sbjct: 152 YRRQGKVNWCT 162


>gi|148984094|ref|ZP_01817389.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|147923383|gb|EDK74496.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
 gi|301800472|emb|CBW33110.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
 gi|332073994|gb|EGI84472.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|149006726|ref|ZP_01830412.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147761641|gb|EDK68605.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|126733398|ref|ZP_01749145.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
 gi|126716264|gb|EBA13128.1| valyl-tRNA synthetase [Roseobacter sp. CCS2]
          Length = 1045

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 193 LWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           +W+    ++  + S  W  G  GW  +  AM   Y     D+   G D++F      +  
Sbjct: 609 IWRDPDVLDTWFSSGLWPFGTLGWPADDEAM--KYFPG--DVLVTGQDILFFWVARMMMM 664

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           S      +    +++H    + +G KMSK+ GN I   ++++       ++ A  +R 
Sbjct: 665 SQAVLEQDPFHTVYLHQLVRDAKGEKMSKTKGNVIDPLDMID-------AYGADALRF 715


>gi|22327660|ref|NP_199714.2| OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/
           catalytic/ isoleucine-tRNA ligase/ nucleotide binding
           [Arabidopsis thaliana]
 gi|19424030|gb|AAL87306.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|23296804|gb|AAN13174.1| putative isoleucyl-tRNA synthetase [Arabidopsis thaliana]
 gi|332008379|gb|AED95762.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 1093

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG--GRSWPAPVIRL 309
           S         + +  H   L+ +G KMSKS GN +    ++E  K      ++ A V+RL
Sbjct: 698 SIATQGKAPYSAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKNSKDAPAYGADVMRL 757

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y   +    Q L +   +  K   T
Sbjct: 758 WVSSVDYTGDVLIGPQILRQMSDIYRKLRGT 788


>gi|88607061|ref|YP_505129.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598124|gb|ABD43594.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 837

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 23/132 (17%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           L  +  KMSKS  N +  +E+L       + + A  +RL ML  T     I++T   +  
Sbjct: 595 LQGKVEKMSKSKKNVVDPSEIL-------KQYGADTVRLFMLSDTPPERDIEWTDCGVEG 647

Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV----SAIQALHKLARESTKNHD----- 380
           A   L +  +   S   I     +      N        +  +HKL      + +     
Sbjct: 648 AWRYLERLWKVLGSNTSISTEFNNE-----NVSGKDLEFLSKVHKLLNGIEGDIEHCRLN 702

Query: 381 -LLPIFNASAHI 391
             +  F   ++I
Sbjct: 703 CAVAKFREMSNI 714


>gi|326495436|dbj|BAJ85814.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 794

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 320 IDFTVQRLTEAEI----LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL----HKL 371
           ID T +RL  AE     L+++  +       ++     AL ND    S I AL    ++L
Sbjct: 422 IDVTNERLDAAEKDTADLIAEVEELRLKLQTVEEEKTEALNNDQLASSEIAALTEQKNEL 481

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
           A+E   + D +     +   L      E   ++     + L+++  I    
Sbjct: 482 AKELEASKDEVEKVKKAMEGLA-SALHEMSAESREAQEKYLIKQEEIERAR 531


>gi|315636616|ref|ZP_07891850.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479125|gb|EFU69824.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 529

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 22/118 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  D L R+ +Y   +    Y  N  D   ++            +
Sbjct: 115 PT--GPLHIGHARGAIFGDSLARVGKYLGYDITTEYYIN--DAGSQMD----------LL 160

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
             ++++        + +D        P    R  +++  +   I       + Y+  N
Sbjct: 161 GLSVNLAARDFI--YGED-----VSYPEVYYR-GDYLIDIANQIIQDYGKDYLYDEKN 210


>gi|294499492|ref|YP_003563192.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294349429|gb|ADE69758.1| isoleucyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 1031

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           ++    K F  D+   G+D       + +A S           +      L+  G+KMSK
Sbjct: 534 NNELFQKQFPADVIAEGIDQTRGWFYSLMAVSTLFTGKAPYKRVLSLGHVLDENGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEILL 334
           S GN +   +L+ T       + A  +R A+L     +  P  F+ + + EA+  +
Sbjct: 594 SKGNALDPVDLIHT-------FGADALRWALLADSAPW-NPKKFSERVVQEAKSKV 641


>gi|206603463|gb|EDZ39943.1| Isoleucyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
          Length = 976

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS  N I+  E++         + A ++RL  
Sbjct: 590 SMALFDTPPYRKVLTHGFVVDGQGRKMSKSLKNVISPLEIIN-------KYGAEILRLWA 642

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+E I  +   L++      K   T
Sbjct: 643 ASSDYQEDIRLSELILSQLVESYRKIRNT 671


>gi|71083652|ref|YP_266372.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
 gi|90101540|sp|Q4FM20|SYV_PELUB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71062765|gb|AAZ21768.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1062]
          Length = 875

 Score = 42.1 bits (98), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THY 316
            E   ++++H    + +G+KMSKS GN I   +L+E        + A  +R  +L     
Sbjct: 506 KEPFKDVYVHALVKDEKGQKMSKSKGNVINPLDLIE-------KYSADALRFTLLSMASP 558

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
              +  +  R+      L+K    
Sbjct: 559 GTDVKLSEDRVKGYRNFLNKLWNA 582


>gi|323703627|ref|ZP_08115270.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323531399|gb|EGB21295.1| valyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 882

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 12/89 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             E    ++IH   L+ +GRKMSKS GN +   E++++         A  +R  ++  + 
Sbjct: 509 HEEPFKEVFIHGLVLDAQGRKMSKSLGNGVDPLEVIDSHG-------ADSLRFMLITGN- 560

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST 342
             P   + F  +RL  A    +K    S 
Sbjct: 561 -TPGNDLRFHFERLDGARSFANKLWNASR 588


>gi|269797242|ref|YP_003311142.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
 gi|269093871|gb|ACZ23862.1| isoleucyl-tRNA synthetase [Veillonella parvula DSM 2008]
          Length = 944

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          ++  H   ++ EGRKMSKS GN +  +++++        + A V+RL +
Sbjct: 591 AVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDV-------YGADVMRLWV 643

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   + +   +  K   T           L    +D N
Sbjct: 644 SSADYQADVRLSKDIVKQLSEVYRKIRNTFR--------FLLGNLDDFN 684


>gi|222445643|ref|ZP_03608158.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435208|gb|EEE42373.1| hypothetical protein METSMIALI_01283 [Methanobrevibacter smithii
           DSM 2375]
          Length = 1090

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 9/65 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  + +H   L+  G+KMSKS GN ++  E++E        + A V+R  +L    
Sbjct: 612 GQVPYKKVLMHGFVLDEHGKKMSKSLGNVVSPEEVIE-------KYGADVLRFYLLWAS- 663

Query: 317 REPID 321
            +P D
Sbjct: 664 -KPWD 667


>gi|220908709|ref|YP_002484020.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
 gi|219865320|gb|ACL45659.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
          Length = 531

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 38/131 (29%), Gaps = 13/131 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I  DV+ R  R          V  IT  D+      + +  +  +  
Sbjct: 18  VNDLPHMGSAYTTIAADVIARFYRLQG-----EAVLLITGTDEH---GQKIQRTAERLGR 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  +    FV+   +L         R T+  H   +      +   G  Y  +   
Sbjct: 70  TPQEHCDQVVNGFVELWQKLNITY-DRFSRTTDPRHAVIVQEFFHRLWERGDIYLGQQQG 128

Query: 151 EIIFDTSSIPN 161
               D      
Sbjct: 129 WYCVDCEEFKE 139



 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 9/83 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H  +  A    A  +     +++H GFL  +G+KM KS GN +   
Sbjct: 260 PINLHLIGKDILRFHTISWPAMLLSA-GLPLPDRVFVH-GFLTKDGQKMGKSLGNTLDPV 317

Query: 290 ELLETKKFGGRSWPAPVIRLAML 312
           +L++        + A  +R   +
Sbjct: 318 DLVDR-------FGAEAVRYYFI 333


>gi|217962514|ref|YP_002341086.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229142350|ref|ZP_04270869.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|226695275|sp|B7HVW2|SYM_BACC7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|217064569|gb|ACJ78819.1| putative methionyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228641120|gb|EEK97432.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKDIADQYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|157738329|ref|YP_001491013.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980179|sp|A8EWM0|SYR_ARCB4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157700183|gb|ABV68343.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 529

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 40/118 (33%), Gaps = 22/118 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  D L R+ +Y   +    Y  N  D   ++            +
Sbjct: 115 PT--GPLHIGHARGAIFGDSLARVGKYLGYDITTEYYIN--DAGSQMD----------LL 160

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
             ++++        + +D        P    R  +++  +   I       + Y+  N
Sbjct: 161 GLSVNLAARDFI--YGED-----VSYPEVYYR-GDYLIDIANQIIQDYGKDYLYDEKN 210


>gi|118480122|ref|YP_897273.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196047520|ref|ZP_03114730.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225867021|ref|YP_002752399.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|187645699|sp|A0RKM3|SYM1_BACAH RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|254782850|sp|C1EYD5|SYM_BACC3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|118419347|gb|ABK87766.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|196021634|gb|EDX60331.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|225787890|gb|ACO28107.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|91776560|ref|YP_546316.1| isoleucyl-tRNA synthetase [Methylobacillus flagellatus KT]
 gi|91710547|gb|ABE50475.1| Isoleucyl-tRNA synthetase [Methylobacillus flagellatus KT]
          Length = 934

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++ +G KMSKS GN I   ++            A ++RL + 
Sbjct: 588 CAIDGRAPYDALLTHGFTVDEKGYKMSKSRGNGIEPQDICNRLG-------ADMLRLWIA 640

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 641 STDYSGEMSLSEEILKRVTDSYRRIRNT 668


>gi|18313245|ref|NP_559912.1| valyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74563325|sp|Q8ZVG2|SYV_PYRAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|18160765|gb|AAL64094.1| valyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 799

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 43/130 (33%), Gaps = 14/130 (10%)

Query: 33  PTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV--RNITDIDDKIIER---AR 84
           P  Y   +  HIG       FD++ R LR    +    +   RN   I+ ++ ++     
Sbjct: 43  PPPYLSSNRPHIGQTASYAHFDMIARFLRMRGVDVIFPFYLDRNGLPIEVQVEKKYGVVA 102

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII---- 140
            E P                 +FV    R   L+  + P  T+  P+   + Q       
Sbjct: 103 HEIPREKFIKMCKEELDSYEGEFVSSLRRWG-LSFDYWPNGTDS-PEYRRMTQKTFIELW 160

Query: 141 LHGHAYEANN 150
             G  YEA  
Sbjct: 161 HKGLVYEAER 170


>gi|326435250|gb|EGD80820.1| isoleucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 1096

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 2/87 (2%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLM 313
                   I  H   L+ E RKMSKS GN +    ++       +   + A V+RL    
Sbjct: 710 TPTAPFKTIITHGFVLDEENRKMSKSLGNGVDPRIVINGGPNLKKEPAYGADVLRLWAAS 769

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT 340
           T Y+  ++     L+     L K   +
Sbjct: 770 TAYQHDVNIGPSTLSITAENLRKIRNS 796


>gi|198452215|ref|XP_001358678.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
 gi|198131835|gb|EAL27820.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
          Length = 588

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y    V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPAADVRLCTGTDEHGTKIQQAAANHKVPVD--Q 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+S+    + +              R T   H   +    + +   GH Y A    
Sbjct: 87  YCQEISSR----YREVFQAAHIHNDDF-IRTTEERHKQAVAQFWRTLHSRGHIYSAAYSG 141

Query: 153 IFDTS 157
            +  S
Sbjct: 142 WYCVS 146



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 30/72 (41%), Gaps = 13/72 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  ++    +++H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 296 AAGLQPPQQLYVHSHW-TVDGQKMSKSKHNVV-------DPVQAAQQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT 323
              H     +++
Sbjct: 348 GVAH--SDGNYS 357


>gi|91763307|ref|ZP_01265271.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91717720|gb|EAS84371.1| valine-tRNA ligase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 875

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 35/84 (41%), Gaps = 8/84 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THY 316
            E   ++++H    + +G+KMSKS GN I   +L+E        + A  +R  +L     
Sbjct: 506 KEPFKDVYVHALVKDEKGQKMSKSKGNVINPLDLIE-------KYSADALRFTLLSMASP 558

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
              +  +  R+      L+K    
Sbjct: 559 GTDVKLSEDRVKGYRNFLNKLWNA 582


>gi|48478263|ref|YP_023969.1| leucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
 gi|48430911|gb|AAT43776.1| leucyl-tRNA synthetase [Picrophilus torridus DSM 9790]
          Length = 891

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 50/142 (35%), Gaps = 25/142 (17%)

Query: 237 GLDLI---FPHHENEIA----QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           G+DL     PH  N ++            EK     + +G +   G K+SKS GN I++ 
Sbjct: 558 GVDLRITAPPHISNHLSFYLMNHAAIFDEEKYPKGLMISGLVISNGAKISKSKGNVISLL 617

Query: 290 ELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKW------PQTST 342
           ++          + A + RL + +       +D+  + L+        +       +   
Sbjct: 618 KI-------KEKYSADIYRLFVAVGADISSLLDWNEKDLSAVIKRYESFIDIMNKFEFKN 670

Query: 343 SKGIIDPAVL----SALYNDLN 360
             G I    L    S L +  N
Sbjct: 671 GDGFIYKWFLSRFYSNLNDYFN 692


>gi|15615600|ref|NP_243904.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|12585349|sp|Q9K8G8|SYV_BACHD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|10175660|dbj|BAB06757.1| valyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 880

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 47/129 (36%), Gaps = 11/129 (8%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P D   WK+   +   W S   W     GW  E +     Y     D    G D+IF   
Sbjct: 436 PQDIDNWKQDEDVLDTWFSSALWPFSTMGWPDEEAPDYKRY--YSTDALVTGYDIIFFWV 493

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I Q           ++ IH    + EG+KMSKS GN +   E+++        + A 
Sbjct: 494 SRMIFQGLEFTGQPPFKDVLIHGLVRDAEGQKMSKSLGNGVDPMEVID-------KYGAD 546

Query: 306 VIRLAMLMT 314
            +R  +   
Sbjct: 547 ALRFFLATG 555


>gi|330833694|ref|YP_004402519.1| leucyl-tRNA synthetase [Streptococcus suis ST3]
 gi|329307917|gb|AEB82333.1| leucyl-tRNA synthetase [Streptococcus suis ST3]
          Length = 833

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 25/122 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQ-------TSTSKGIID-------PAVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +        + + G +D         V   + +   NT  AI  L      + K  
Sbjct: 662 DRVYRLLTTKELAAENSGALDKVYNETVKTVTEHIEDLKFNT--AIAQLMIFVNAANKED 719

Query: 380 DL 381
            L
Sbjct: 720 KL 721


>gi|330811915|ref|YP_004356377.1| Leucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380023|gb|AEA71373.1| Leucine--tRNA ligase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 868

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 37/140 (26%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  QPGKETYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +  N A +  T +N          L  LA       T   P      Q  
Sbjct: 87  ENAA------MKNNVAPAKWTYENIAYMKTQLRSLG-LAVDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|309389514|gb|ADO77394.1| valyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 884

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 54/132 (40%), Gaps = 15/132 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E + + S Y     D+   G D+IF      I         +  ++I+IH    + 
Sbjct: 467 GWPEETADLESFY---PTDVLVTGRDIIFFWVARMIFMGLKFQDQKPFSDIYIHGLIRDA 523

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEA 330
           +GRKMSKS GN I   ++++        +    +R  ++  +   P   + F  +RL  +
Sbjct: 524 QGRKMSKSLGNGIDPLDIID-------QFGTDALRFTLITGN--TPGNDMRFREERLEAS 574

Query: 331 EILLSKWPQTST 342
               +K    S 
Sbjct: 575 RNFANKIWNASR 586


>gi|206978214|ref|ZP_03239094.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|206743573|gb|EDZ55000.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
          Length = 544

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKDIADQYHEEFERCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|119509064|ref|ZP_01628215.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119466230|gb|EAW47116.1| leucyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 873

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 43/144 (29%), Gaps = 17/144 (11%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              +    + Y      Y     H+G+ R   + DV+ RL R    +  V +        
Sbjct: 26  TPANSHKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGYK--VLHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP-RATNHIPQMIYL 135
                 A      I      +  T +N  Q  +   RL  LA   +   AT   P     
Sbjct: 84  LPAENAA------IDRGVPPAKWTYQNIAQMRQQLQRLG-LAIDWETELATCS-PDYYKW 135

Query: 136 IQ----NIILHGHAYEANNEIIFD 155
            Q         G AY+    + +D
Sbjct: 136 TQWIFLQFWQAGLAYQKEAAVNWD 159


>gi|260905354|ref|ZP_05913676.1| ATPase [Brevibacterium linens BL2]
          Length = 850

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 52/148 (35%), Gaps = 15/148 (10%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL----AR 373
           +P+      + +A  +L            +             T  AI+A  +L      
Sbjct: 368 QPVRVGEPNIEDAVAILDGLKDRYAEHHNVTY-----------TPEAIRASVELSDRYIN 416

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
           +       + + + +   L +    +   + +   IE+L  E+   +  + +  A  +R 
Sbjct: 417 DRFLPDKAIDLIDQAGARLSLRRGPKVDTQALRTEIERLETEKNTAISEENYERAGELRD 476

Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQKP 461
           ++ S G  L   +NPD+G +      KP
Sbjct: 477 EVMSLGEKLHAAENPDDGAQRAEADAKP 504


>gi|20806639|ref|NP_621810.1| methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|25009362|sp|Q8RDD1|SYM_THETN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|20515086|gb|AAM23414.1| Methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 638

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 66/184 (35%), Gaps = 48/184 (26%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G +++  H             A  +     ++ H G+L LEG KMSKS GN +  
Sbjct: 253 DVHLVGKEIVRFH----TIIWPAMLMALGLPLPKKVFGH-GWLILEGGKMSKSKGNVVDP 307

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL---------TEAEILLSK-- 336
            EL++        +    IR  +L    +     F+ + L          +   LLS+  
Sbjct: 308 KELVDR-------YGVDAIRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTV 360

Query: 337 ----------WPQTSTSKGI----------IDPAVLSALYNDLNTVSAIQALHKLAREST 376
                      P+ S+ + I          +   V   + + L   +A+  + KL   + 
Sbjct: 361 TMIEKYFDGVLPKPSSQEEIDEDLINVAQNLPQKVEEYM-DKLQFSNALIEIWKLVSRAN 419

Query: 377 KNHD 380
           K  D
Sbjct: 420 KYID 423


>gi|330837433|ref|YP_004412074.1| lysyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329749336|gb|AEC02692.1| lysyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 530

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)

Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
          Y C  G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 34 YTCASGITPSGTVHIGNFREIISVDLVVRALRSQGHDVRFIYSWDDYDV 82


>gi|307263538|ref|ZP_07545153.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|306871181|gb|EFN02910.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 861

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 48/159 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND----- 358
             +  A+  L +          + +   +D A                ++ + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKN-----HDLLPIFNASAHI 391
             NT  AI A+ +L  + TK       D   +  A + +
Sbjct: 721 TFNT--AIAAIMELMNKLTKAPLENEQDKAVMAEALSAV 757


>gi|307256925|ref|ZP_07538703.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306864659|gb|EFM96564.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 916

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 48/159 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 666 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 715

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND----- 358
             +  A+  L +          + +   +D A                ++ + +D     
Sbjct: 716 SGVEGAKRFLGRVWNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQ 775

Query: 359 -LNTVSAIQALHKLARESTKN-----HDLLPIFNASAHI 391
             NT  AI A+ +L  + TK       D   +  A + +
Sbjct: 776 TFNT--AIAAIMELMNKLTKAPLENEQDKAVMAEALSAV 812


>gi|225859414|ref|YP_002740924.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|254782441|sp|C1C8P8|SYI_STRP7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225720958|gb|ACO16812.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 930

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|219115549|ref|XP_002178570.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217410305|gb|EEC50235.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1086

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 40/104 (38%), Gaps = 14/104 (13%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
              DLI  H    +         E       +  NG + ++  KMSKS GNF+ +N+ ++
Sbjct: 703 SAKDLIQNHLTMALFNHAAVWEEEPELWPKGYYCNGHVLVDAEKMSKSKGNFLMMNDTIQ 762

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILL 334
           T       + A   R A       + +D   F+ +    A + L
Sbjct: 763 T-------YGADATRFACADAG--DSLDDANFSRETADAAILSL 797


>gi|187478980|ref|YP_787004.1| leucyl-tRNA synthetase [Bordetella avium 197N]
 gi|123766015|sp|Q2KXE5|SYL_BORA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|115423566|emb|CAJ50102.1| leucyl-tRNA synthetase [Bordetella avium 197N]
          Length = 885

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 35/245 (14%), Positives = 63/245 (25%), Gaps = 64/245 (26%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + D++ R LR       +          D     
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------DAFGMP 91

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----- 137
           A  E+ +I      +  T  N     K    +              I     +       
Sbjct: 92  A--ENAAIKSKVPPAKWTYDNIAYMKKQMKAMGL-----------AIDWSREMCACDPAY 138

Query: 138 ---------NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                     ++  G AY     +              +  ++ + +          ++ 
Sbjct: 139 YKWNQWLFLKMLEKGIAYRKTQVVNWDPVDQT----VLANEQVIDGRGWRSGAPVEKREI 194

Query: 188 PA------DFI--LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
           P       D+   L  +     PGW                 M  +++GK       G+ 
Sbjct: 195 PGYYLRITDYADELLDQVKNGLPGWPERVR-----------VMQENWIGK-----SEGVR 238

Query: 240 LIFPH 244
           L FPH
Sbjct: 239 LAFPH 243


>gi|79330394|ref|NP_001032042.1| OVA2 (ovule abortion 2); ATP binding / aminoacyl-tRNA ligase/
           isoleucine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|332008380|gb|AED95763.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 955

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG--GRSWPAPVIRL 309
           S         + +  H   L+ +G KMSKS GN +    ++E  K      ++ A V+RL
Sbjct: 698 SIATQGKAPYSAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKNSKDAPAYGADVMRL 757

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y   +    Q L +   +  K   T
Sbjct: 758 WVSSVDYTGDVLIGPQILRQMSDIYRKLRGT 788


>gi|32033514|ref|ZP_00133841.1| COG0495: Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208348|ref|YP_001053573.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
 gi|165976293|ref|YP_001651886.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|303251268|ref|ZP_07337446.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|303252870|ref|ZP_07339029.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|307247860|ref|ZP_07529896.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307252499|ref|ZP_07534395.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|307261357|ref|ZP_07543032.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|166230605|sp|A3N0N2|SYL_ACTP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687565|sp|B0BPF7|SYL_ACTPJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126097140|gb|ABN73968.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
           str. L20]
 gi|165876394|gb|ABY69442.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|302648300|gb|EFL78497.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. 4226]
 gi|302649810|gb|EFL79988.1| leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306855662|gb|EFM87829.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306860091|gb|EFM92108.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|306869088|gb|EFN00890.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 861

 Score = 42.1 bits (98), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 48/159 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND----- 358
             +  A+  L +          + +   +D A                ++ + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKN-----HDLLPIFNASAHI 391
             NT  AI A+ +L  + TK       D   +  A + +
Sbjct: 721 TFNT--AIAAIMELMNKLTKAPLENEQDKAVMAEALSAV 757


>gi|330818072|ref|YP_004361777.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370465|gb|AEA61821.1| Isoleucyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 25/122 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A ++RL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVSNRLG-------AEIVRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
           L        +   T          +L+ L +              A+++    + L I  
Sbjct: 665 LKRVTEGYRRIRNTLR-------FLLANLSD-----------FDYAKDALPAAEWLEIDR 706

Query: 387 AS 388
            +
Sbjct: 707 YA 708


>gi|323454450|gb|EGB10320.1| expressed protein [Aureococcus anophagefferens]
          Length = 363

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 20/55 (36%), Gaps = 7/55 (12%)

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
            A+  L+ ERL   + + F  AD +R +L                 R   W  +P
Sbjct: 79  DAVNGLLAERLDAKRDRNFPRADELRDELMR-------THGVRVWDRERTWSAQP 126



 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)

Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQL-ESKGFILEDY 445
              A++ L+  R+     + F  AD +R++L    G  + D 
Sbjct: 155 DETAVDALLLARMHAKMGRDFGRADALREELSRDHGVRVHDG 196


>gi|322705718|gb|EFY97302.1| leucyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
          Length = 961

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/160 (15%), Positives = 44/160 (27%), Gaps = 18/160 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R    +  +       D      E A  E      
Sbjct: 92  PYPSGSLHLGHLRVYSIADTVARYHRLKGDDVLLPMGW---DAFGLPAENAALER----- 143

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII----LHGHAYEA 148
                + T  N ++  +    +           T   P+     Q +       G AY+A
Sbjct: 144 GIDPGVWTRSNIKKMKEQLGSMNGSW-DWSRELTACDPEFYKHTQKLFLMLRERGLAYQA 202

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
             E+              +  ++D      R   K  K+ 
Sbjct: 203 EAEVNYDPVDKT----VLANEQVDANGCSWRSGAKVEKRK 238


>gi|319897592|ref|YP_004135789.1| leucyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317433098|emb|CBY81472.1| leucyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLDSEQDRAVMA 751


>gi|282849351|ref|ZP_06258736.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
 gi|282581055|gb|EFB86453.1| isoleucine--tRNA ligase [Veillonella parvula ATCC 17745]
          Length = 944

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 42/109 (38%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          ++  H   ++ EGRKMSKS GN +  +++++        + A V+RL +
Sbjct: 591 AVATTGKAPYNSVLTHGFVVDGEGRKMSKSVGNTVAPSDIIDV-------YGADVMRLWV 643

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   + +   +  K   T           L    +D N
Sbjct: 644 SSADYQADVRLSKDIVKQLSEVYRKIRNTFR--------FLLGNLDDFN 684


>gi|268611662|ref|ZP_06145389.1| isoleucyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
          Length = 933

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ EG+ M KS GN I  +E+ +        + A ++RL +
Sbjct: 588 SVVFKGSSPYKAVCTHGWVVDGEGKTMHKSLGNGIDPSEITD-------QYGADILRLWV 640

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             + Y   I  +   L++      K   T+ 
Sbjct: 641 ASSDYHSDIRISKPILSQLSDAYKKIRNTAR 671


>gi|254293350|ref|YP_003059373.1| isoleucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
 gi|254041881|gb|ACT58676.1| isoleucyl-tRNA synthetase [Hirschia baltica ATCC 49814]
          Length = 989

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 21/148 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   +  +GRKMSKS GN I  +E+        + + A ++R+ +
Sbjct: 634 SCATRGRAPYEGVLTHGFVVAQDGRKMSKSLGNGIEPDEVC-------KQFGAEIMRIWV 686

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSA--- 364
             T Y +   F    +        K   T      +    D +   A+ +     S    
Sbjct: 687 GSTDYTDDPAFGKDIIAANVDSYRKLRNTMRYLLGALHGFDDSERVAVQD---MPSLEQW 743

Query: 365 ----IQALHKLARESTKNHDLLPIFNAS 388
               +  +    R + + +D    F   
Sbjct: 744 MLHRLTEVDAKVRAAFEAYDFQAAFKEL 771


>gi|296807197|ref|XP_002844184.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238843667|gb|EEQ33329.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 588

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+   +++ D+L R              + +T  D+      + +  ++    
Sbjct: 60  VNAAPHIGHLYTILIADILKRWQVLLGNGD----AKLLTGTDEH---GMKIQQAALQNGL 112

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N + F             H  R T+  H   + +  +N+   G+ YE  +E 
Sbjct: 113 EPQALCDRNCKTFKTLAKEANVSH-DHFIRTTDSAHKSAVQFFWENLNHRGYIYEGKHEG 171

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 172 WYSVSDETFY 181


>gi|171464053|ref|YP_001798166.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193591|gb|ACB44552.1| isoleucyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 953

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
           D       +  H   ++ +GRKMSKS GN I   ++ +          A +IRL +  T 
Sbjct: 606 DGKPPYKALLTHGFTVDGQGRKMSKSVGNVIAPQQVADKLG-------AEIIRLWVASTD 658

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 659 YSGEMTISDEILKRVTESYRRIRNT 683


>gi|27262334|gb|AAN87448.1| Isoleucyl-tRNA synthetase [Heliobacillus mobilis]
          Length = 754

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +GRKMSKS GN +    +++          A ++RL +
Sbjct: 401 AVATKGTAPYKAVLTHGFLVDEQGRKMSKSLGNGVDPLAVIKDMG-------ADILRLWV 453

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               YR  +  +   L +      K   T
Sbjct: 454 ASVDYRNDVAVSPNILRQIADGYRKIRNT 482


>gi|81300729|ref|YP_400937.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|123556548|sp|Q31LW9|SYL_SYNE7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|81169610|gb|ABB57950.1| leucyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 865

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 47/174 (27%), Gaps = 18/174 (10%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
                   + Y      Y     H+G+ R   + D + R+ R       V +        
Sbjct: 42  TPEADDRPKFYALSMFPYPSGNLHMGHVRNYTITDAIARVKRRQGF--RVLHPMGWDAFG 99

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T +N  Q  +   +L  L+       T   P      
Sbjct: 100 LPAENAA------IDRGVQPADWTYQNVAQMREQLKQLG-LSYDWDREVTTCSPDYYRWT 152

Query: 137 Q----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q         G AY+    + +D          +  ++D +    R   K  ++
Sbjct: 153 QWLFLQFFEAGLAYQKEATVNWDPIDQT---VLANEQVDSEGRSWRSGAKVERR 203


>gi|77360260|ref|YP_339835.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
 gi|123589440|sp|Q3IL10|SYM_PSEHT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76875171|emb|CAI86392.1| methionyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
          Length = 673

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A+  + T N++ H GF+ + G KMSKS G FI     L+
Sbjct: 288 HFIGKDIIYFHSLFWPAMLEGANFRKPT-NVFAH-GFVTVNGEKMSKSKGTFIKARTYLD 345

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 346 NLN-------PEYLRYY 355


>gi|301169639|emb|CBW29240.1| leucyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLDSEQDRAVMA 751


>gi|222098488|ref|YP_002532546.1| methionyl-tRNA synthetase [Bacillus cereus Q1]
 gi|254782851|sp|B9J4E0|SYM_BACCQ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|221242547|gb|ACM15257.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 544

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I  +  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKDIADQYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|171185908|ref|YP_001794827.1| valyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935120|gb|ACB40381.1| aminoacyl-tRNA synthetase class Ia [Thermoproteus neutrophilus
           V24Sta]
          Length = 799

 Score = 41.8 bits (97), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 45/130 (34%), Gaps = 14/130 (10%)

Query: 33  PTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV--RNITDIDDKIIER---AR 84
           P  Y   +  HIG       FD++ R LR    +    +   RN   I+ ++ ++     
Sbjct: 43  PPPYLSSNRPHIGQTASYAHFDMIARFLRMRGVDVVFPFYLDRNGLPIEVQVEKKYNIVA 102

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII---- 140
            E P             K   +FV    R   L+  + P+ T+  P+   + Q       
Sbjct: 103 HEVPREKFLQLCKEELDKYEGEFVATLRRWG-LSFDYWPQGTDS-PEYRRMTQKTFVELW 160

Query: 141 LHGHAYEANN 150
             G  YEA  
Sbjct: 161 RKGLIYEAER 170


>gi|222422851|dbj|BAH19412.1| AT5G49030 [Arabidopsis thaliana]
          Length = 955

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG--GRSWPAPVIRL 309
           S         + +  H   L+ +G KMSKS GN +    ++E  K      ++ A V+RL
Sbjct: 698 SIATQGKAPYSAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKNSKDAPAYGADVMRL 757

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y   +    Q L +   +  K   T
Sbjct: 758 WVSSVDYTGDVLIGPQILRQMSDIYRKLRGT 788


>gi|172039458|ref|YP_001805959.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|254782384|sp|B1WVA3|SYI_CYAA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171700912|gb|ACB53893.1| isoleucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 959

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 2/113 (1%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S   + I     +  H   L+ +G KMSKS GN +  N +
Sbjct: 565 DIYLEGSDQHRGWFQSSLLTSVAVNEIAPYKTVLTHGFVLDEKGHKMSKSLGNIVDPNVI 624

Query: 292 LETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   K   +   + A V+RL +    Y   +      L +   +  K   T+ 
Sbjct: 625 INGGKNQKQEPPYGADVLRLWVSSVDYSSDVPIGKTILKQLSDIYRKIRNTAR 677


>gi|157412597|ref|YP_001483463.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980057|sp|A8G2P6|SYI_PROM2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157387172|gb|ABV49877.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 965

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 14/174 (8%)

Query: 172 EQKMGTRVPEKYHKKNPADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           + ++   +PE Y K++     LW K +  M+  ++S        W   C       L   
Sbjct: 528 DWEVKNLLPENYLKESD----LWEKGTDTMDVWFDSG-----SSWAAVCE--QRSELKYP 576

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            D++  G D      ++ +  S   +       +  H   L+  GRKMSKS GN +  N 
Sbjct: 577 ADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKRVLTHGFALDENGRKMSKSLGNVVDPNI 636

Query: 291 LLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++     K    ++ A V+RL +    Y   +      L +   +  K   T+ 
Sbjct: 637 IINGGNNKKSEPAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTAR 690


>gi|90413229|ref|ZP_01221224.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
 gi|90325781|gb|EAS42239.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
          Length = 680

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI     LE
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAGTYLE 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L        A+ A  + A  + +  +L      S  I  I    + 
Sbjct: 394 SRNAGFIAKRFEGKLSETFAEP-ALYA--EFANAADRIAELYETREFSRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ I  
Sbjct: 451 ANQYIDE 457


>gi|307245736|ref|ZP_07527822.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307254707|ref|ZP_07536535.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307259149|ref|ZP_07540879.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306853438|gb|EFM85657.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306862380|gb|EFM94346.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306866816|gb|EFM98674.1| Leucyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 55/159 (34%), Gaps = 48/159 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND----- 358
             +  A+  L +          + +   +D A                ++ + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYSQNPATAALDVAALSKAQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKN-----HDLLPIFNASAHI 391
             NT  AI A+ +L  + TK       D   +  A + +
Sbjct: 721 TFNT--AIAAIMELMNKLTKAPLENEQDKAVMAEALSAV 757


>gi|229918362|ref|YP_002887008.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
 gi|229469791|gb|ACQ71563.1| valyl-tRNA synthetase [Exiguobacterium sp. AT1b]
          Length = 883

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 52/133 (39%), Gaps = 11/133 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ PAD   W +   +   W S   W     GW    +   + Y      +   G D+I
Sbjct: 435 GKEAPADSENWTQDEDVLDTWFSSALWPFSTMGWPDADAPDFNRYFPTSALV--TGYDII 492

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I QS      +   ++ IH    + EGRKMSKS GN +   E+++        
Sbjct: 493 FFWVSRMIFQSLEFTGKQPFNDVLIHGLIRDSEGRKMSKSLGNGVDPMEVID-------Q 545

Query: 302 WPAPVIRLAMLMT 314
           + A  +R  +L  
Sbjct: 546 YGADSLRWFLLTG 558


>gi|167723126|ref|ZP_02406362.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 318

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 37/118 (31%), Gaps = 15/118 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 62  HMGHARNYVLADADSRFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 113

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEANNEI 152
             + ++       RL     +   R T  H+P     +Q     +   GH +  +  +
Sbjct: 114 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRDAPV 169


>gi|52081291|ref|YP_080082.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786670|ref|YP_092499.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647204|ref|ZP_08001426.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|81825234|sp|Q65GK8|SYV_BACLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|52004502|gb|AAU24444.1| valyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349172|gb|AAU41806.1| ValS [Bacillus licheniformis ATCC 14580]
 gi|317390551|gb|EFV71356.1| valyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 880

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 13/128 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I Q           ++ IH    + +GRKMSKS GN +   +++
Sbjct: 481 VLVTGYDIIFFWVSRMIFQGIEFTGERPFKDVLIHGLIRDDQGRKMSKSLGNGVDPMDVI 540

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIID 348
           +        + A  +R  +       P   + F+ +++       +K W  +  +   +D
Sbjct: 541 D-------KYGADSLRYFLATGS--SPGQDLRFSFEKVESTWNFANKIWNASRFALMNMD 591

Query: 349 PAVLSALY 356
                 L 
Sbjct: 592 GMTYEELD 599


>gi|33152252|ref|NP_873605.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|48428533|sp|Q7VM66|SYL_HAEDU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33148474|gb|AAP95994.1| leucyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 53/162 (32%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           +H+G       KMSKS  N I   E++E        + A  +RL M+      P    ++
Sbjct: 613 VHSGM-----TKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLE 657

Query: 322 FTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSAL--------------------YND-- 358
           +    +  A+  L + W              L+AL                     +D  
Sbjct: 658 WQESGVEGAKRFLGRVWNLVYEYVQQPATQALNALELNKAQKELRRDVHKTIAKVSDDIG 717

Query: 359 ----LNTVSAIQALHKLARESTK-----NHDLLPIFNASAHI 391
                NT  AI A+ +L  +  K     + D   +  A + +
Sbjct: 718 RRQTFNT--AIAAIMELMNKLNKAPLESDQDKAVMAEALSAV 757


>gi|21229069|ref|NP_634991.1| isoleucyl-tRNA synthetase [Methanosarcina mazei Go1]
 gi|74522709|sp|Q8PSV9|SYI_METMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|20907621|gb|AAM32663.1| Isoleucyl-tRNA synthetase [Methanosarcina mazei Go1]
          Length = 1058

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 74/197 (37%), Gaps = 32/197 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++ +H   L+  G+KMSKS GN I+  +++         + A  +R  +
Sbjct: 571 SMVGFGRAPYKSVLMHGFTLDAGGKKMSKSLGNVISPLDIIGR-------FGADTLRAYV 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----LSALYNDLNTVSAIQ 366
           L +    P D       + +  L +      S  I+           AL N       +Q
Sbjct: 624 LSSS--APWD-------DLKFNLEEVETIHRSINILWNVFRFPLPYMALDN----FDPMQ 670

Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILL 420
                 R++ +  D   +  A + +  ++      +  + + + +   +E L +  + L+
Sbjct: 671 VSLDSVRDALREEDRWILSRAQSVVKSVDEAMSGYLLHKAVREILDFTLEDLSRWYIQLI 730

Query: 421 KMKKFSSADYIRKQLES 437
           + + ++ AD    +L +
Sbjct: 731 RPRTWTEADD-PDKLAA 746


>gi|303314943|ref|XP_003067480.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240107148|gb|EER25335.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 568

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   +++ D+L R             +   TD     I++A   H   PI  
Sbjct: 60  VNASPHVGHLYTLVLADILKRWQVLLGNNDA--QLLTGTDEHGIKIQQAAASHGLEPIK- 116

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N Q F     +       H  R T   H   + Y  + +   G+ Y A +E 
Sbjct: 117 ----LCDQNCQTFKDLAQKANVQH-DHFIRTTDPEHRDAVQYFWEMLDHRGYIYTAKHEG 171

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 172 WYSVSDETFY 181


>gi|193216533|ref|YP_001999775.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|238692472|sp|B3PM19|SYR_MYCA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|193001856|gb|ACF07071.1| arginyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 541

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 15/91 (16%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL--- 333
           KMSK  G  +T+ ELL+             +R  ++   Y   IDF + ++ +++     
Sbjct: 376 KMSKRLGTSLTLRELLDLVGK-------DAVRYFLIERSYNSKIDFDINKVQKSDETNPL 428

Query: 334 -LSKWPQTS----TSKGIIDPAVLSALYNDL 359
            L K+          K  I   + S L ND 
Sbjct: 429 FLIKYAHARCYQLLEKAQIKNPIASNLENDF 459


>gi|209886346|ref|YP_002290203.1| isoleucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
 gi|209874542|gb|ACI94338.1| isoleucyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
          Length = 989

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN     +++       +   A ++RL +
Sbjct: 634 SCGTRGRAPYDVVLTHGFTLDEQGRKMSKSLGNTTAPQDVI-------KQSGADILRLWV 686

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +    + L        K   T
Sbjct: 687 AQSDYSDDLRIGPEILKGTIETYRKLRNT 715


>gi|325272199|ref|ZP_08138622.1| isoleucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
 gi|324102665|gb|EGC00089.1| isoleucyl-tRNA synthetase [Pseudomonas sp. TJI-51]
          Length = 943

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 18/173 (10%)

Query: 205 ESPWGRGRPGWH-IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           +  +  G   WH +  S    H  G   D++  G D       + +   C  D       
Sbjct: 535 DVWFDSGTTHWHVLRGSHNIGHATGPRADLYLEGSDQHRGWFHSSLLTGCAIDNHAPYRE 594

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +  H   ++  GRKMSKS GN I   ++  T         A ++RL +  T Y   +  +
Sbjct: 595 LLTHGFTVDENGRKMSKSLGNTIEPEKVNNTLG-------ADILRLWVSATDYSGEMAVS 647

Query: 324 VQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            Q L  +     +   T+    ++    DPA       DL     + AL + A
Sbjct: 648 EQILQRSADAYRRIRNTARFLLSNLSGFDPAR------DLLAPQDMLALDRWA 694


>gi|167031665|ref|YP_001666896.1| isoleucyl-tRNA synthetase [Pseudomonas putida GB-1]
 gi|189082330|sp|B0KM84|SYI_PSEPG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166858153|gb|ABY96560.1| isoleucyl-tRNA synthetase [Pseudomonas putida GB-1]
          Length = 943

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 64/173 (36%), Gaps = 18/173 (10%)

Query: 205 ESPWGRGRPGWH-IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           +  +  G   WH +  S    H  G V D++  G D       + +   C  D       
Sbjct: 535 DVWFDSGTTHWHVLRGSHDIGHTTGPVADLYLEGSDQHRGWFHSSLLTGCAIDNHAPYRE 594

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +  H   ++  GRKMSKS GN I   ++  T         A ++RL +  T Y   +  +
Sbjct: 595 LLTHGFTVDENGRKMSKSLGNTIEPEKVNNTLG-------ADILRLWVSATDYSGEMAVS 647

Query: 324 VQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            Q L  +     +   T+    ++    DPA       DL     + AL + A
Sbjct: 648 EQILQRSADAYRRIRNTARFLLSNLSGFDPAR------DLLAPEDMLALDRWA 694


>gi|10177193|dbj|BAB10327.1| isoleucyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 988

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG--GRSWPAPVIRL 309
           S         + +  H   L+ +G KMSKS GN +    ++E  K      ++ A V+RL
Sbjct: 593 SIATQGKAPYSAVITHGFVLDEKGMKMSKSLGNVVDPRLVIEGGKNSKDAPAYGADVMRL 652

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y   +    Q L +   +  K   T
Sbjct: 653 WVSSVDYTGDVLIGPQILRQMSDIYRKLRGT 683


>gi|304315496|ref|YP_003850643.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|9297121|sp|P26499|SYI_METTM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68525|pir||SYEXI isoleucine-tRNA ligase (EC 6.1.1.5) [validated] - Methanobacterium
           thermoautotrophicum (strain Marburg)
 gi|149728|gb|AAA72950.1| transfer RNA-Ile synthetase [Methanothermobacter
           thermautotrophicus]
 gi|302588955|gb|ADL59330.1| isoleucyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 1045

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 12/78 (15%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A        + +H   L+ EGRKMSKS GN +   +++E        + A V+R  +L  
Sbjct: 569 ALDETPYRRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIE-------KYGADVLRFYLLWA 621

Query: 315 HYREPID---FTVQRLTE 329
              +P +   F    L  
Sbjct: 622 --NKPWEDLKFVWDELKN 637


>gi|58699209|ref|ZP_00374017.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|58534275|gb|EAL58466.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
          Length = 568

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 46/157 (29%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKI------IERAR 84
           PT     HIG+AR  +  DVL  LL+    +    Y  N     ID  I       + A 
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKSVYLRYKEAL 188

Query: 85  QEHPSIPINDAISI--------ITSKNTQQFV---------------------KDTTRLA 115
            E  SI                +  K  ++F+                     +D   L 
Sbjct: 189 GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQIIREYTLSFILELIKEDMNLLG 248

Query: 116 CLAPTHQPRATNHI----PQMIYLIQNIILHGHAYEA 148
                H    + +      ++   I+ +   G  YE 
Sbjct: 249 V---NHDVFTSEYELQKSGKIEESIKILSDKGLVYEG 282


>gi|310657932|ref|YP_003935653.1| valyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308824710|emb|CBH20748.1| valyl-tRNA synthetase [Clostridium sticklandii]
          Length = 884

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 69/172 (40%), Gaps = 32/172 (18%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             ++++IH    + EGRKMSKS GN I   E+++T       + A  +R  +   +   P
Sbjct: 508 PFSHVFIHGLVRDSEGRKMSKSLGNGIDPLEIIDT-------YGADALRFTLATGN--SP 558

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVLSALYNDLNTVSAIQA---- 367
              + F ++R+  +    +K    S       +             D+N    +      
Sbjct: 559 GNDMRFYMERVEASRNFANKIWNASRFIFMNLENSQKKEFKR---EDVNEALELSDKWII 615

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             ++ L++E T+N D   +  A + +          ++     IE LV++RL
Sbjct: 616 SRVNSLSKEMTENMDKFELGIAVSKV-----YDFAWSEFCDWYIE-LVKQRL 661


>gi|299531569|ref|ZP_07044975.1| isoleucyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298720532|gb|EFI61483.1| isoleucyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 951

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 47/283 (16%), Positives = 82/283 (28%), Gaps = 61/283 (21%)

Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
           L        PR    I Q   +I+         +   E     S+             E 
Sbjct: 505 LHVDTGALHPRTMEIIDQAAAMIE---------QGGIEAWSRVST-------------ED 542

Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL--GKVF 231
            +G    + Y K               E  ++S    G   WH+       H+   G   
Sbjct: 543 ILGAEEAKSYTKSTDIL----------EVWFDS----GSTFWHVLRGTHPEHHHDKGPEA 588

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + +  +           +  H   ++ +G+KMSKS GN +   ++
Sbjct: 589 DLYLEGHDQHRGWFHSSLLLASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVAPQDV 648

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                       A +IRL +  T Y   +    + L        +   T           
Sbjct: 649 SSKMG-------AEIIRLWVASTDYSGDLGIDDKILARVVDAYRRIRNTLR--------F 693

Query: 352 LSALYNDLNTVS-AIQAL-------HKLARESTKNHDLLPIFN 386
           L A  +D +    A+            LAR +    ++L  + 
Sbjct: 694 LLANTSDFDASKDAVAYGEMLEIDQFALARSAQLQQEILAHYK 736


>gi|291519314|emb|CBK74535.1| Leucyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
          Length = 472

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 19/125 (15%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTE 329
           L  +G+KMSKS GN I   ++++       ++ A  +R   + M  Y     ++   +  
Sbjct: 245 LGEDGQKMSKSRGNVIDPLDIVD-------AYGADTLRTYVLFMGDYGAAAPWSDASVRG 297

Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
            +  L ++       G+ D     A     N+ S    +HK  ++ +++ + +    A A
Sbjct: 298 CKRFLERF------AGLTDIVTDEA-----NSESIEAGIHKTIKKVSEDIEAMKYNTAIA 346

Query: 390 HILGI 394
            ++G+
Sbjct: 347 AMMGL 351


>gi|160902697|ref|YP_001568278.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360341|gb|ABX31955.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 645

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 46/125 (36%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV D++ R  R    +  V ++    +   K+++ A+++      N 
Sbjct: 13  VNSEPHIGSAYTTIVADIVARFKRMMGYD--VFFLTGTDEHGQKVLQAAKEK------NI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                    + +F      +      H  R T+  H+  +   +  ++ +G  Y+     
Sbjct: 65  PPQEYVDSLSSKFKNLWDEMGISY-DHFVRTTDAYHVKTVQMFVDKMMENGDVYKGKYAG 123

Query: 153 IFDTS 157
            +   
Sbjct: 124 WYCIH 128



 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 17/70 (24%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE---- 318
            ++ H G+L + G+K+SKS GN +    L++       ++   VIR  +L    R+    
Sbjct: 285 KVFAH-GWLTVNGQKISKSLGNAVDPRILMD-------AYGRDVIRYYLL----RDIAFG 332

Query: 319 -PIDFTVQRL 327
              DF+ + L
Sbjct: 333 RDGDFSEENL 342


>gi|126666975|ref|ZP_01737951.1| leucyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126628691|gb|EAZ99312.1| leucyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 862

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 49/141 (34%), Gaps = 38/141 (26%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N I    +++          A  +RL M+      + ++++   +  A   L 
Sbjct: 620 KMSKSKNNGIDPQSIIDAHG-------ADTVRLFMMFAAPPEQSLEWSDSGVEGAHRFLK 672

Query: 336 KW----PQTSTSKGIIDPAVLSALYN-----------------D-------LNTVSAIQA 367
           +      +  TS   +    + AL +                 D        NT  AI A
Sbjct: 673 RLWRLVNEQVTSADTVPAIDVPALNDGQKNLRRKTHETIAKVSDDISRRLTFNT--AIAA 730

Query: 368 LHKLARESTKNHDLLPIFNAS 388
           + +L  E +K +D  P   A 
Sbjct: 731 VMELLNEVSKLNDSEPQTRAV 751


>gi|114705798|ref|ZP_01438701.1| isoleucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
 gi|114538644|gb|EAU41765.1| isoleucyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
          Length = 1021

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 50/148 (33%), Gaps = 16/148 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   ++ EGRKMSKS GN +T  E++       +   A ++RL +
Sbjct: 664 SCGTRGRAPYNAVLTHGFVMDEEGRKMSKSLGNVVTPQEVI-------KQSGADILRLWV 716

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLNTVSA------ 364
           + + Y E +      L        K   T     G +       + +D            
Sbjct: 717 VSSDYSEDLRLGKTILQTNVDSYRKLRNTVRWMLGTLAHDRGETVSHD-EMPELERLMLH 775

Query: 365 -IQALHKLARESTKNHDLLPIFNASAHI 391
            +  L +L R+     D   I  A    
Sbjct: 776 RLAELDELVRKGYDGFDFKRISRALLDF 803


>gi|19114395|ref|NP_593483.1| glutamate-tRNA ligase (predicted) [Schizosaccharomyces pombe 972h-]
 gi|21362946|sp|O13775|SYEC_SCHPO RecName: Full=Probable glutamyl-tRNA synthetase, cytoplasmic;
           AltName: Full=Glutamate--tRNA ligase; Short=GluRS
 gi|2370487|emb|CAB11515.1| glutamate-tRNA ligase (predicted) [Schizosaccharomyces pombe]
          Length = 716

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 37/120 (30%), Gaps = 27/120 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  +    L +     Y  K       I   DD    +   E      
Sbjct: 213 PEPSGYLHIGHAKAAL----LNQYFANKYHGKL------IVRFDDTNPSKENSE------ 256

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
                          ++D   L    P      ++++  +     ++I  G AY  + ++
Sbjct: 257 ----------FQDAILEDVALLGIK-PDVVTYTSDYLDTIHQYCVDMIKSGQAYADDTDV 305


>gi|270263710|ref|ZP_06191979.1| leucyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270042594|gb|EFA15689.1| leucyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 902

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 59/156 (37%), Gaps = 23/156 (14%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             +     KMSKS  N I    ++E        + A  +RL M+      P    +++  
Sbjct: 653 ELVYAGMSKMSKSKNNGIDPQVMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 702

Query: 325 QRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHD 380
             +  A   L +  + +     KG + P  ++AL  D     A+ + LHK   + T +  
Sbjct: 703 SGVEGANRFLKRVWKLAYEHLEKGAVQPLNVAALNED---QKALRRDLHKTIAKVTDDIG 759

Query: 381 LLPIFN-ASAHILGIEVCKEHLNKNISIAIEKLVQE 415
               FN A A ++ +        ++       L+QE
Sbjct: 760 RRQTFNTAIAAVMELMNKLARAPQDSEQD-RALLQE 794


>gi|227877968|ref|ZP_03995972.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256844348|ref|ZP_05549834.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256849249|ref|ZP_05554682.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|262047264|ref|ZP_06020222.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381475|ref|ZP_06627470.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
           214-1]
 gi|312978357|ref|ZP_07790099.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227862438|gb|EEJ69953.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256613426|gb|EEU18629.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|256714025|gb|EEU29013.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|260572509|gb|EEX29071.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921945|gb|EFD98952.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
           214-1]
 gi|310894700|gb|EFQ43772.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 658

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 11/119 (9%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNA   I  D + R  R    +   T+    TD         + E  +           
Sbjct: 22  IGNAYTTIAADTMARYKRSQGYD---TFFLTGTD-----EHGLKIEQKAEAQGIKPQEFV 73

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            K    + K    L         R T   H+  +  + + ++  G  Y       +   
Sbjct: 74  DKMAASYKKLWKSLNISY-DKFIRTTDKEHVAAVQKIFEKLLAKGDIYLGEYTGWYSVE 131


>gi|156546787|ref|XP_001605772.1| PREDICTED: similar to leucyl-tRNA synthetase [Nasonia vitripennis]
          Length = 965

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 47/157 (29%), Gaps = 14/157 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R   +    K V +              AR+       
Sbjct: 157 PYPSGSLHMGHVRVYTISDSVARF--HRMNGKNVIHPMGWDAFGLPAENAARERQV---- 210

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
               +  T  N +   +   RL C   TH   AT    +      L   +  +G  Y+  
Sbjct: 211 --DPAKWTQLNIENMREQLLRLGCTFDTHSEFATCDPEYYRWTQELFLKLYENGLLYQRE 268

Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             + +D          +  ++DE     R      K+
Sbjct: 269 TYVNWDPIDQT---VLADEQVDENNRSWRSGAIIEKR 302


>gi|83593036|ref|YP_426788.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83575950|gb|ABC22501.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 519

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 15/134 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +     V+ +T  D+      + +  +     
Sbjct: 17  VNDKPHIGHAYTTLACDVLARFKRLDGFD-----VKFLTGTDEH---GQKVQKSATAAGI 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
                T + +  F +D       +     R T   P+     +     ++  G  Y    
Sbjct: 69  DPQTFTDRVSANF-RDLAAAMNFSNDAFIRTTE--PRHKEACKALWTLLVERGEIYLDAY 125

Query: 151 EIIFDTSSIPNYGS 164
              +       YG 
Sbjct: 126 RGWYAVRDEAFYGE 139


>gi|68249507|ref|YP_248619.1| leucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81336066|sp|Q4QLY8|SYL_HAEI8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|68057706|gb|AAX87959.1| Leucyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLDSEQDRAVMA 751


>gi|50954520|ref|YP_061808.1| valyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|81391128|sp|Q6AFZ2|SYV_LEIXX RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50951002|gb|AAT88703.1| valyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 862

 Score = 41.8 bits (97), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 14/103 (13%)

Query: 214 GWH--IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           GWH   E  A  S Y     D+   G D+I     + + +S   D +    +  +    +
Sbjct: 524 GWHRDDELFAAVSPY-----DLRPQGQDIIRTWLFSTLLRSQLEDGVAPWTHAALSGFIV 578

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           + + +KMSKS GN +T  ++LE          +  +R     +
Sbjct: 579 DPDRKKMSKSKGNVVTPADVLERHG-------SDAVRYWAASS 614


>gi|307103580|gb|EFN51839.1| hypothetical protein CHLNCDRAFT_32859 [Chlorella variabilis]
          Length = 1077

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 19/89 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN---IWIH----NGFLNLEGRKMSKSN 282
            FD+   G DLI  H        C  +     A     W      NG L L   KMSKS 
Sbjct: 664 PFDLRVSGKDLIQNHLT-----FCLYNHTAIWAQQQQYWPLSIRCNGHLLLNAEKMSKST 718

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAM 311
           GNF T+ + +         + +  +R+A+
Sbjct: 719 GNFKTLQQAIV-------EYSSDAMRIAL 740


>gi|257866932|ref|ZP_05646585.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
 gi|257800988|gb|EEV29918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC30]
          Length = 767

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 486 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSKSRG 545

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++         + A  +RL  M M      I +    L  +   L + W    
Sbjct: 546 NVVNPDDVIN-------QYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 598

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
              G +   + +      N     +  H+  ++ T++ + L    A + ++         
Sbjct: 599 DENGKMRDRITT-----FNDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMVFVNEAYKA 653

Query: 402 NKNISIAIEKLVQ 414
           +      +E  VQ
Sbjct: 654 DALPYEYVEGFVQ 666


>gi|16272858|ref|NP_439081.1| leucyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260580010|ref|ZP_05847840.1| leucyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174531|sp|P43827|SYL_HAEIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1573943|gb|AAC22581.1| leucyl-tRNA synthetase (leuS) [Haemophilus influenzae Rd KW20]
 gi|260093294|gb|EEW77227.1| leucyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLDSEQDRAVMA 751


>gi|88811010|ref|ZP_01126266.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
 gi|88791549|gb|EAR22660.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
          Length = 678

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   + T  ++ H GFL + G+KMSKS G FIT    L 
Sbjct: 287 HFIGKDIVYFHALFWPAMLEGAGFRKPT-RLFAH-GFLTVNGQKMSKSRGTFITARTYL- 343

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 344 ------HHLNPEYLRYYF 355


>gi|332800368|ref|YP_004461867.1| arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332698103|gb|AEE92560.1| Arginyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 569

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 57/196 (29%), Gaps = 55/196 (28%)

Query: 9   NTLERKIT--EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           NT E K    EF + +P+       GP      H+GNAR   + D L  +L     +   
Sbjct: 123 NTGEGKKVQVEFVSANPT-------GP-----MHMGNARGAALGDALASILEMVGFDVTK 170

Query: 67  TYVRNIT---------------------------------DIDDKIIERARQEHPSIPIN 93
            +  N                                   DI + + +   QE       
Sbjct: 171 EFYINDAGNQIENFGLSLEARYLELMGKQGEIPEGGYHGEDIIEHMKDLIEQEGDRFLYM 230

Query: 94  DAISIIT-------SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI-YLIQNIILHGHA 145
           D+ +           KN ++  KD               + H    +  +I+ +   G+ 
Sbjct: 231 DSPTRRAYFINYALEKNIERMKKDLENFGVHFDVWFSEQSLHSSGKVNEVIKILTDRGYT 290

Query: 146 YEANNEIIFDTSSIPN 161
           YE +  + F  S    
Sbjct: 291 YEKDGALWFKASQFGE 306


>gi|296169876|ref|ZP_06851488.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295895432|gb|EFG75134.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 513

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 14/124 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+A   +  D + R  R    +     VR +T  D+  ++       +     
Sbjct: 13  PNGNPHVGHAYEYVATDAIARFKRLDGFD-----VRFLTGTDEHGLK---MMETAAAEGI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
             + +  +N+  F +   +L   +     R T+  P      Q I       EA  +I  
Sbjct: 65  PTAELARRNSDVFQRLQEKLNI-SFDRFIRTTD--PDHHEASQEIWRRM---EAAGDIYL 118

Query: 155 DTSS 158
           D+ S
Sbjct: 119 DSYS 122


>gi|282860901|ref|ZP_06269967.1| NLP/P60 protein [Streptomyces sp. ACTE]
 gi|282564637|gb|EFB70173.1| NLP/P60 protein [Streptomyces sp. ACTE]
          Length = 355

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 38/115 (33%), Gaps = 13/115 (11%)

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
           +RL  A   L  +       G IDPAV  AL +D +      A    A +  +   L  +
Sbjct: 98  ERLNAARNALGSFATAQYRTGGIDPAVRLALSSDPDQYLERAAFEDRAGD-RQAGALNGV 156

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
               + I         L       +E L   R  L K K     D +R +L    
Sbjct: 157 RRQVSEI-------AQLRARAENELEALTSRRAELRKQK-----DTVRTKLADAQ 199


>gi|254526098|ref|ZP_05138150.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537522|gb|EEE39975.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 965

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 14/174 (8%)

Query: 172 EQKMGTRVPEKYHKKNPADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           + ++   +PE Y K++     LW K +  M+  ++S        W   C       L   
Sbjct: 528 DWEVKNLLPENYLKESD----LWEKGTDTMDVWFDSG-----SSWAAVCE--QRSELKYP 576

Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
            D++  G D      ++ +  S   +       +  H   L+  GRKMSKS GN +  N 
Sbjct: 577 ADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKRVLTHGFALDENGRKMSKSLGNVVDPNI 636

Query: 291 LLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           ++     K    ++ A V+RL +    Y   +      L +   +  K   T+ 
Sbjct: 637 IINGGNNKKSEPAYGADVLRLWVSSVDYSVDVPIGSNILKQLSDVYRKVRNTAR 690


>gi|195434889|ref|XP_002065434.1| GK14672 [Drosophila willistoni]
 gi|194161519|gb|EDW76420.1| GK14672 [Drosophila willistoni]
          Length = 1204

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 688 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDDTKWPKGMRVNGHLLLNSSKMSKSDGNF 745

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T++E ++        + A  +RL +
Sbjct: 746 LTLSEAVD-------KFSADGMRLCL 764


>gi|189083224|sp|A9WS85|SYL_RENSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 862

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 18  FQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           F  +D     R YVC    Y     H+G+A   ++ DV+ R  +    +
Sbjct: 61  FAPLDDGSKERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFD 109


>gi|150864552|ref|XP_001383414.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
 gi|149385808|gb|ABN65385.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
          Length = 863

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 36/214 (16%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DV+ R  R               ++   +   A     E+ ++      
Sbjct: 10  HLGHTRVYTISDVIARFKRLKGY-----------NVIHPMGWDAFGLPAENAAVERGVNP 58

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI 152
           +  T +N  +  +                T   P      Q I      +G AY    +I
Sbjct: 59  ADWTERNIDKMKEQID-FMLADFDWDREVTTCSPDYYKWTQKIFLLLFENGLAYRKEAQI 117

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF--ILWKRSTPMEPGWESPWG 209
                         +  ++D +    R      K+N   +   + K ++ +    +    
Sbjct: 118 NWDPVDQT----VLANEQVDSEGKSWRSGALVEKRNLEQWFIGITKYASELNRDLDYL-- 171

Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
               GW  +  AM  H++G+    HG  +  IFP
Sbjct: 172 ---KGWPQKVKAMQRHWIGES---HGAEI--IFP 197


>gi|15669137|ref|NP_247942.1| isoleucyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2501012|sp|Q58357|SYI_METJA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1591614|gb|AAB98949.1| isoleucyl-tRNA synthetase (ileS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 1039

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN +  ++++E        + A ++R 
Sbjct: 573 ALSAIVFNDIPYKKCLMHGFTLDEHGDKMSKSLGNVVNPDDVVE-------KYGADLLRF 625

Query: 310 AMLMT 314
            +L  
Sbjct: 626 YLLSA 630


>gi|320037850|gb|EFW19787.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 584

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   +++ D+L R             +   TD     I++A   H   PI  
Sbjct: 60  VNASPHVGHLYTLVLADILKRWQVLLGNNDA--QLLTGTDEHGIKIQQAAASHGLEPIK- 116

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N Q F     +       H  R T   H   + Y  + +   G+ Y A +E 
Sbjct: 117 ----LCDQNCQTFKDLAQKANVQH-DHFIRTTDPEHRDAVQYFWEMLDHRGYIYTAKHEG 171

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 172 WYSVSDETFY 181


>gi|229164009|ref|ZP_04291946.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228619392|gb|EEK76281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 544

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRSLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|312137335|ref|YP_004004672.1| isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
 gi|311225054|gb|ADP77910.1| Isoleucyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
          Length = 1036

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A        + +H   L+ +GRKMSKS GN +   E++       R + A V+R  +L
Sbjct: 567 AHEKIPYKKVLMHGFTLDEQGRKMSKSLGNVVEPEEVI-------RKYGADVLRFYLL 617


>gi|289548851|ref|YP_003473839.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
 gi|289182468|gb|ADC89712.1| isoleucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
          Length = 926

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +       ++  H   ++ +GRKMSKS GN ++  E+L       + + A ++RL +
Sbjct: 574 SVASYGHAPYRSVLTHGFTVDEQGRKMSKSLGNVVSPQEVL-------KEYGADILRLWV 626

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +   Y E I      L        K   T
Sbjct: 627 VSEDYTEDIRLGKGILQRLAEDYKKIRNT 655


>gi|159029236|emb|CAO87596.1| metG [Microcystis aeruginosa PCC 7806]
          Length = 537

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 9/82 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+H  G D++  H     A    A  +     ++ H GFL  +GRKM KS GN +   
Sbjct: 261 PIDLHLIGKDILRFHAIYWPAMLMSA-GLPLPKRVFGH-GFLTKDGRKMGKSLGNTLDPF 318

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +L++        + A  +R   
Sbjct: 319 DLVDR-------YGADAVRYYF 333



 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   IV DV+ R  R          V  IT  D+      + E  +     
Sbjct: 19  VNDIPHIGSAYTTIVADVMARWKRLQG-----NSVLLITGTDEH---GQKIERTAAAKGL 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
                  +    F     +L         R T    Q I     + +   G  Y    + 
Sbjct: 71  NPQEHCDRIATSFANLWAKLHIQY-DRFSRTTAPRHQAIVNEFFEKVWEKGDIYLDRQQG 129

Query: 153 IFDTS 157
            +  +
Sbjct: 130 WYCVA 134


>gi|67465998|ref|XP_649157.1| leucyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
 gi|56465525|gb|EAL43771.1| leucyl-tRNA synthetase, putative [Entamoeba histolytica HM-1:IMSS]
          Length = 1072

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    +         +K       NG L +   KM+KS GNF+++ 
Sbjct: 674 PFDVRVTGKDLLTNHCLFCLYTHTAMFGEDKFPKGMRANGHLLINNEKMAKSTGNFLSLT 733

Query: 290 ELLETKKFGG 299
           + +E     G
Sbjct: 734 DGIELYTSDG 743


>gi|228923768|ref|ZP_04087046.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835897|gb|EEM81260.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 544

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 11/123 (8%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHG 143
           QE            I +K  ++F +    L      +   A+ H  + +  +   ++  G
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFHDLGFTYDCYTHTASEHHHETVQNVFLRLLEEG 113

Query: 144 HAY 146
           + Y
Sbjct: 114 YIY 116


>gi|212712130|ref|ZP_03320258.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM
           30120]
 gi|212685177|gb|EEB44705.1| hypothetical protein PROVALCAL_03212 [Providencia alcalifaciens DSM
           30120]
          Length = 675

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 65/180 (36%), Gaps = 41/180 (22%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FIT    L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFITARSYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTE-------------------- 329
                   + A  +R      L +  R + ID  ++   +                    
Sbjct: 349 -------HFDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGF 399

Query: 330 -AEILLSKWPQTSTSKGIIDPAVLSA--LYNDLNTVS---AIQALHKLARESTKNHDLLP 383
            A+    K         +    V +A  + +D        A++ +  LA  + +  D   
Sbjct: 400 IAKRFAGKLSANLAEPELYQQFVDAAKVIGDDFTNREYGKAVREIMALADIANRYVDEKA 459


>gi|167376921|ref|XP_001734212.1| leucyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
 gi|165904440|gb|EDR29663.1| leucyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
           SAW760]
          Length = 1072

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G DL+  H    +         +K       NG L +   KM+KS GNF+++ 
Sbjct: 674 PFDVRVTGKDLLTNHCLFCLYTHTAMFGEDKFPKGMRANGHLLINNEKMAKSTGNFLSLT 733

Query: 290 ELLETKKFGG 299
           + +E     G
Sbjct: 734 DGIELYTSDG 743


>gi|160934412|ref|ZP_02081799.1| hypothetical protein CLOLEP_03285 [Clostridium leptum DSM 753]
 gi|156867085|gb|EDO60457.1| hypothetical protein CLOLEP_03285 [Clostridium leptum DSM 753]
          Length = 795

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 26/163 (15%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E  A    H   L   G KMSKS GN +  ++++       + + A  +RL  M +  + 
Sbjct: 554 EPYAKRTSHGMILGENGEKMSKSRGNVVNPDDIV-------KEYGADTMRLFEMFIGDFE 606

Query: 318 EPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLSALYND-----LNTV 362
           +   ++   +      + ++               S        +  +  D      NT 
Sbjct: 607 KAAPWSAAGIRGCRRFVERYWNLQDILVKDGGIRASLETPFHKTIKKVGEDIENLKFNT- 665

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
            AI AL  L  +   +  + P       IL +     H+ + +
Sbjct: 666 -AIAALMSLINDIYDSGSITPEELKVFTIL-LNPFAPHVTEEV 706


>gi|57239219|ref|YP_180355.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58579177|ref|YP_197389.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81352891|sp|Q5HB39|SYR_EHRRW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57161298|emb|CAH58219.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417803|emb|CAI27007.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 576

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  DVL  LL     E    Y  N       ++  +        +
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLERVGYEVVREYYINDAGAQIDVLVESVYLRYKEVL 191

Query: 93  NDAISIITSKNTQQFVKDTTRL 114
            + I I +      ++KD  +L
Sbjct: 192 GENIVIGSGLYPGLYLKDIGKL 213


>gi|66808675|ref|XP_638060.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
 gi|74996834|sp|Q54N83|SYLC_DICDI RecName: Full=Leucyl-tRNA synthetase, cytoplasmic; AltName:
           Full=Leucine--tRNA ligase; Short=LeuRS
 gi|60466511|gb|EAL64563.1| leucyl-tRNA synthetase [Dictyostelium discoideum AX4]
          Length = 1058

 Score = 41.8 bits (97), Expect = 0.23,   Method: Composition-based stats.
 Identities = 23/70 (32%), Positives = 30/70 (42%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    +         +        NGF+NL G KMSKS GNF+T+ 
Sbjct: 664 PVDIRVSGADLIQNHLTFFLYTHAAIFEKKFQPKSIRANGFVNLNGEKMSKSTGNFLTLV 723

Query: 290 ELLETKKFGG 299
           + +      G
Sbjct: 724 DSVAKFSADG 733


>gi|331703032|ref|YP_004399719.1| methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801587|emb|CBW53740.1| Methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 509

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 18/137 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+A    + D+L R  +    E        +T  D+      + E+ +   N      
Sbjct: 19  HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEH---GQKIENKAKEANLTPLEY 70

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII----LHGHAYEANNEIIFD 155
            +   Q F    T+L         R T+        +Q I       G+ Y+   E I+ 
Sbjct: 71  LNPKVQAFKDLWTKLNIDY-DKFIRTTD--DYHEKAVQRIFTILLEKGYIYKGQYEGIYC 127

Query: 156 TSSIPNYGSFSRRKIDE 172
            S        +  +IDE
Sbjct: 128 VSCEE---FLTNEQIDE 141


>gi|302036441|ref|YP_003796763.1| isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
 gi|300604505|emb|CBK40837.1| Isoleucyl-tRNA synthetase [Candidatus Nitrospira defluvii]
          Length = 939

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   L+  GRKMSKS GN +   +++       +   A ++RL +    YRE +  + + 
Sbjct: 606 HGFVLDGAGRKMSKSAGNVVAPQDVI-------KQSGAEILRLWVSAQDYREDLRISQEI 658

Query: 327 LTEAEILLSKWPQT 340
           L        K   T
Sbjct: 659 LNHLIEAYRKIRNT 672


>gi|161527875|ref|YP_001581701.1| leucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339176|gb|ABX12263.1| leucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 955

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 16/100 (16%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +                + NG + ++G KMSKS GN I +   ++  
Sbjct: 580 SGRDLVQNHLSFFVLNHVAIFEKNLWPQEIVVNGSVMMDGAKMSKSMGNIIPLRAAIKDH 639

Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
                   A  IRLA++          + + L +A+  + 
Sbjct: 640 G-------ADPIRLAIIS---------SAELLQDADFNME 663


>gi|70953694|ref|XP_745932.1| leucyl-tRNA synthetase  [Plasmodium chabaudi chabaudi]
 gi|56526405|emb|CAH78798.1| leucyl-tRNA synthetase, cytoplasmic, putative [Plasmodium chabaudi
           chabaudi]
          Length = 1250

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 33/107 (30%), Gaps = 37/107 (34%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQS--------------------------------- 252
            FDI   G DLIF H      N +A                                   
Sbjct: 785 PFDIRISGKDLIFNHLTMSLFNHVAIWGQKVYKKNKDCLEEKSALDRQTEILNEVDKLDL 844

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
              + I+     +  NG + +   KMSKS GNFITI   +      G
Sbjct: 845 NQCESIKYFPKSFFCNGHVLVNKEKMSKSKGNFITIENSISQYTSDG 891


>gi|325911674|ref|ZP_08174081.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476440|gb|EGC79599.1| valine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  +K  E  +    P+     +  + +L  W  S        + W     GW  E +A 
Sbjct: 417 WYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSS--------ALWPFSTLGWPDEEAAD 468

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS    +     N+ +H    + +GRKMSKS 
Sbjct: 469 FKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSL 526

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I   +++E        + A  +R  +L  T   +   F+  ++  A   ++K    S
Sbjct: 527 GNGIDPMDVVE-------KYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWNFINKIWNAS 579

Query: 342 T--SKGIIDPAVLSAL 355
                 + + A  + +
Sbjct: 580 RFVIMNLPEDAAAAHM 595


>gi|325292849|ref|YP_004278713.1| methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060702|gb|ADY64393.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 516

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 44/128 (34%), Gaps = 11/128 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+ + AR E        +   
Sbjct: 20  PHIGHAYELIATDAMARFQRLDG--MDVFFLTGTDEHGQKMQQTARAE------GISPEE 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+ QF +   +L   +     R T   H      +   +   G  Y+ +    +  
Sbjct: 72  LAQRNSDQFRE-MGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYKDSYAGWYSV 130

Query: 157 SSIPNYGS 164
                YG 
Sbjct: 131 RDEAYYGE 138


>gi|312138647|ref|YP_004005983.1| methionine-tRNA ligase metg [Rhodococcus equi 103S]
 gi|311887986|emb|CBH47298.1| methionine-tRNA ligase MetG [Rhodococcus equi 103S]
          Length = 528

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    E        +T  D+  ++    +  +      +  
Sbjct: 32  PHIGHAYEYISSDAIARFKRLDGFEVFF-----LTGTDEHGLK---MQQTAAKEGVDVRD 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           + ++N+  F      L         R T  +H+     + + ++  G  Y       +  
Sbjct: 84  LATRNSDVFQAMDKALNISY-DRFIRTTDADHLEASKAIWERMVAAGDIYLDTYSGWYSV 142

Query: 157 S 157
            
Sbjct: 143 R 143


>gi|157113359|ref|XP_001657794.1| leucyl-tRNA synthetase [Aedes aegypti]
 gi|108877784|gb|EAT42009.1| leucyl-tRNA synthetase [Aedes aegypti]
          Length = 1182

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 37/150 (24%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N +A     +   K       NG L L   KMSKS GNF
Sbjct: 666 PVDLRVSGKDLIQNHLTFFLYNHVAMW--PNDSSKWPRGIRCNGHLLLNSAKMSKSEGNF 723

Query: 286 ITI-------------------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +T+                    + +E   F   +  A ++RL          I++  + 
Sbjct: 724 LTLYEAIAKFSADGTRLCLADAGDSIEDANFVESTADAGILRLYTF-------IEWVKET 776

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
           L  A+ +L K P       + D   +S + 
Sbjct: 777 L-AAKAMLRKGP----LDDLNDAVFMSEMN 801


>gi|20091262|ref|NP_617337.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|74530882|sp|Q8TN62|SYI_METAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19916383|gb|AAM05817.1| isoleucyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 1058

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/197 (15%), Positives = 71/197 (36%), Gaps = 32/197 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++ +H   L+  G+KMSKS GN ++  ++++          A  +R  +
Sbjct: 571 SMVGFGRAPYKSVLMHGFTLDAGGKKMSKSLGNVVSPLDIIDRLG-------ADTLRAYV 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-----LSALYNDLNTVSAIQ 366
           L +    P         + +  L +      S  I+           AL N       +Q
Sbjct: 624 LSSS--APW-------EDLKYNLEEVETVHRSINILWNVFRFPLPYMALDN----FDPMQ 670

Query: 367 ALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
                 +++ +  D         +  A    +   +  + + + +  A+E L +  + L+
Sbjct: 671 VSLDSVKDALREEDRWILSRAQSVIKAVNEAMSGYLLHKAVREILEFALEDLSRWYIQLI 730

Query: 421 KMKKFSSADYIRKQLES 437
           + + ++ AD    +L +
Sbjct: 731 RPRTWTEADD-PDKLAA 746


>gi|329769692|ref|ZP_08261095.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328838300|gb|EGF87911.1| isoleucyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 910

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 268 NGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
            GF+    G KMSKS GN I+ N++       G+   A +IRL      Y + +  +   
Sbjct: 585 AGFVMDGNGNKMSKSLGNVISPNDV-------GKQLGAEIIRLWSASVDYTQDVRISNDI 637

Query: 327 LTEAEILLSKWPQT 340
           L +      K   T
Sbjct: 638 LKQVSETYRKIRNT 651


>gi|327311388|ref|YP_004338285.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326947867|gb|AEA12973.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 629

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 27/73 (36%), Gaps = 16/73 (21%)

Query: 269 GFLNLEGRKMSKSNGNFITINELL----------------ETKKFGGRSWPAPVIRLAML 312
             +N+ G KMS   G ++ ++E+L                E     G    A  IR   L
Sbjct: 429 EMVNMPGMKMSARRGQYVALDEILDEAAERSADVVKEKDREVASVVGEKVGAGAIRFFYL 488

Query: 313 MTHYREPIDFTVQ 325
               R+PIDF   
Sbjct: 489 SASPRKPIDFKWD 501


>gi|332652515|ref|ZP_08418260.1| methionine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332517661|gb|EGJ47264.1| methionine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 655

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 8/115 (6%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+    +  D + R  R    +  V ++    +   KI ++A++   S       
Sbjct: 17  DKLHIGHTYCTVATDAMARYKRLCGYD--VLFLTGTDEHGQKIEDKAKEAGVSPKEFVDK 74

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
            +   +       D  +L  ++     R T+  H+  +  + + +   G  Y+  
Sbjct: 75  IVTGERGVL----DLWKLMNISNDRFIRTTDDYHVSAIQKIFKKMYEKGDIYKGE 125



 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 8/63 (12%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
             +G+L L+G KMSKS GN +               +    +R  +L T  +    +F+ 
Sbjct: 289 FGHGWLLLDGGKMSKSKGNVV-------DPYILAERFGVDALRFFLLRTFPFGSDGNFSN 341

Query: 325 QRL 327
           + L
Sbjct: 342 EAL 344


>gi|307710391|ref|ZP_07646831.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
 gi|307618868|gb|EFN98004.1| valyl-tRNA synthetase [Streptococcus mitis SK564]
          Length = 883

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 7/76 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM 311
                 + A  +R  +
Sbjct: 537 -----KYGADALRWFL 547


>gi|194747537|ref|XP_001956208.1| GF25092 [Drosophila ananassae]
 gi|190623490|gb|EDV39014.1| GF25092 [Drosophila ananassae]
          Length = 869

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 53/182 (29%), Gaps = 33/182 (18%)

Query: 18  FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F   +  N + YV     Y     H+G+ R   + D + R  R     K V         
Sbjct: 55  FDPQNTKN-KYYVLSMFPYPSGNLHMGHVRVYTIADAVARFQRMCG--KNVFQPMGWDSF 111

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL----------APTHQPRA 125
                  A Q           +  T +N  Q  K   RL C           +P +  R 
Sbjct: 112 GLPAENAANQRGVE------PASWTEQNIDQMRKQLKRLGCSFDWNHELSTCSPQYY-RW 164

Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           T H+  M      +  HG AY+    +              +  ++D      R   K  
Sbjct: 165 TQHLFLM------LHRHGLAYQNEALVNWDPVDKT----VLADEQVDANGCSWRSGAKVE 214

Query: 185 KK 186
           KK
Sbjct: 215 KK 216


>gi|149193818|ref|ZP_01870916.1| valyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
 gi|149135771|gb|EDM24249.1| valyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
          Length = 858

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 62/165 (37%), Gaps = 20/165 (12%)

Query: 192 ILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
            LW  ST     WE   WG+G   W+ E     + +      I   G D++F      + 
Sbjct: 449 ALWPFSTLG---WENGEWGKGI-KWNEED---LNRFYPNNLLI--TGFDILFFWVARMMM 499

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
                 +     ++++H    +  G+KMSKS GN I   E++E        + A ++R  
Sbjct: 500 MGTHFLKEVPFKDVYLHALVRDEHGQKMSKSKGNVIDPLEMIE-------KYSADILRFT 552

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  ++ EA    +K    +    +       
Sbjct: 553 LAVLAVQGR-DIKLSENKMIEARNFTNKLYNAARFLKMHQDKFED 596


>gi|30020663|ref|NP_832294.1| class 1 lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229127944|ref|ZP_04256928.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|29896215|gb|AAP09495.1| Class 1 lysyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228655506|gb|EEL11360.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 517

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+   M+VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNK-EMFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACL 117
             R +    D    +     P   I D     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|47212355|emb|CAF93909.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 933

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 43/88 (48%), Gaps = 1/88 (1%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGG-RSWPAPVIRLAMLMTHYREPIDFTV 324
           +H   +  +G KMSKS GN +  +E++   K     ++ A V+R  +  ++    +    
Sbjct: 591 VHGFVVGEKGEKMSKSVGNVVDPDEVINGGKDTATTAYGADVLRWWVAESNVFSEVQIGA 650

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVL 352
             L  A   ++K P++S++  +++   +
Sbjct: 651 NVLNSARDDINKVPRSSSAYCLVNDVFI 678


>gi|15829138|ref|NP_326498.1| isoleucyl-tRNA synthetase [Mycoplasma pulmonis UAB CTIP]
 gi|81532810|sp|Q98PQ2|SYI_MYCPU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|14090082|emb|CAC13840.1| ISOLEUCYL-TRNA SYNTHETASE (ISOLEUCINE--TRNA LIGASE) (ILERS)
           [Mycoplasma pulmonis]
          Length = 888

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 61/178 (34%), Gaps = 31/178 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD++  G+D       + I  S           +  H   L+ +G+KMSK  GN +   
Sbjct: 545 PFDLYLEGIDQYRGWFNSSIINSVAYWGQSPYRLLLSHGFVLDGKGKKMSKQLGNVVDPQ 604

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           E++       + + A ++RL +    Y   +  +   + +      K   T         
Sbjct: 605 EII-------QKYGADILRLWVANCEYAHDVSVSESIIKQTVENYRKIRNTI-------K 650

Query: 350 AVLSALYN----DLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHIL 392
            +L  L +      N    ++ +H+L  E  K           ++D   +     + L
Sbjct: 651 FLLGNLQDYDHSKFN--LKLEGIHELINERLKKVKFDILQAYNDYDFNDVIKTLTNFL 706


>gi|307721053|ref|YP_003892193.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
 gi|306979146|gb|ADN09181.1| methionyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
          Length = 647

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 17/85 (20%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           DIH  G D++  H     A    A      +E   +I  H G+   +G KMSKS GN ++
Sbjct: 253 DIHFVGKDILRFH-----AIYWPAFLMSLGLELPKHIGAH-GWWTRDGEKMSKSKGNVVS 306

Query: 288 INELLETKKFGGRSWPAPVIRLAML 312
             E+ +       ++    +R  ML
Sbjct: 307 PKEVAD-------AYGVENLRYFML 324


>gi|238582714|ref|XP_002390015.1| hypothetical protein MPER_10780 [Moniliophthora perniciosa FA553]
 gi|215452932|gb|EEB90945.1| hypothetical protein MPER_10780 [Moniliophthora perniciosa FA553]
          Length = 264

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 22/82 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FDI   G DLI  H    + ++               NG L L G KMSKS GN +T+ 
Sbjct: 67  PFDIRSSGKDLINNHLTFALMRT---------------NGHLLLNGAKMSKSTGNSLTLR 111

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           + +E        + A   RLA+
Sbjct: 112 DAVE-------KFGADATRLAL 126


>gi|85707659|ref|ZP_01038725.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1]
 gi|85689193|gb|EAQ29196.1| valyl-tRNA synthetase [Erythrobacter sp. NAP1]
          Length = 917

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E + +   +      I   G D++F      +              +++H      
Sbjct: 498 GWPEENAPLLDKHFPNSLLI--SGFDILFFWDARMMMMGQYNMGEAPWPRLYLHGLVRAA 555

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +G KMSKS GN +    L++        + A  +R  M
Sbjct: 556 DGSKMSKSKGNVVDPLGLID-------QFGADALRFFM 586


>gi|57167771|ref|ZP_00366911.1| valyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|305432205|ref|ZP_07401369.1| valine--tRNA ligase [Campylobacter coli JV20]
 gi|57020893|gb|EAL57557.1| valyl-tRNA synthetase [Campylobacter coli RM2228]
 gi|304444748|gb|EFM37397.1| valine--tRNA ligase [Campylobacter coli JV20]
          Length = 870

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALGALPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNEEQFED 597


>gi|312871640|ref|ZP_07731732.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|311092865|gb|EFQ51217.1| valine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  +K  E  +    P+     +  + +L  W  S        + W     GW  E +A 
Sbjct: 417 WYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSS--------ALWPFSTLGWPDEEAAD 468

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS    +     N+ +H    + +GRKMSKS 
Sbjct: 469 FKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSL 526

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I   +++E        + A  +R  +L  T   +   F+  ++  A   ++K    S
Sbjct: 527 GNGIDPMDVVE-------KYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWNFINKIWNAS 579

Query: 342 T--SKGIIDPAVLSAL 355
                 + + A  + +
Sbjct: 580 RFVIMNLPEDAAAAHM 595


>gi|312873260|ref|ZP_07733316.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311091271|gb|EFQ49659.1| valine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  +K  E  +    P+     +  + +L  W  S        + W     GW  E +A 
Sbjct: 417 WYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSS--------ALWPFSTLGWPDEEAAD 468

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS    +     N+ +H    + +GRKMSKS 
Sbjct: 469 FKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSL 526

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I   +++E        + A  +R  +L  T   +   F+  ++  A   ++K    S
Sbjct: 527 GNGIDPMDVVE-------KYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWNFINKIWNAS 579

Query: 342 T--SKGIIDPAVLSAL 355
                 + + A  + +
Sbjct: 580 RFVIMNLPEDAAAAHM 595


>gi|229044295|ref|ZP_04191966.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
 gi|228725052|gb|EEL76338.1| Lysyl-tRNA synthetase [Bacillus cereus AH676]
          Length = 517

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+   M+VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNK-EMFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACL 117
             R +    D    +     P   I D     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|161620279|ref|YP_001594165.1| isoleucyl-tRNA synthetase [Brucella canis ATCC 23365]
 gi|161337090|gb|ABX63394.1| isoleucyl-tRNA synthetase [Brucella canis ATCC 23365]
          Length = 972

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLTHDEGENVAYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|160915954|ref|ZP_02078162.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
 gi|158432430|gb|EDP10719.1| hypothetical protein EUBDOL_01979 [Eubacterium dolichum DSM 3991]
          Length = 874

 Score = 41.8 bits (97), Expect = 0.24,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 11/130 (8%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    Y     D+   G D+IF        Q+    +     ++ IH    + 
Sbjct: 461 GW-PEQTADLERYFPN--DVLVTGYDIIFFWVARMAFQTRYCMKSRPFKDVLIHGLVRDS 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN +   +++              +R  +       + + ++ +++  +  
Sbjct: 518 QGRKMSKSLGNGVDPMDVIAKSGV-------DSLRFFLTTNSTPGQDLRYSEEKVEASAN 570

Query: 333 LLSKWPQTST 342
            ++K    + 
Sbjct: 571 FINKIWNAAR 580


>gi|328551739|gb|AEB22231.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328909999|gb|AEB61595.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 663

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A +E      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEEE------NITPQAY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIP-QMIYLI-QNIILHGHAYEANNEIIFDTS 157
             +   +  K   +L         R T     ++I  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAVAEIQKLWKQLDISHDDF-IRTTESRHKEIIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|315653725|ref|ZP_07906645.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325913051|ref|ZP_08175424.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|315489087|gb|EFU78729.1| valine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|325477731|gb|EGC80870.1| valine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  +K  E  +    P+     +  + +L  W  S        + W     GW  E +A 
Sbjct: 417 WYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSS--------ALWPFSTLGWPDEEAAD 468

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS    +     N+ +H    + +GRKMSKS 
Sbjct: 469 FKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSL 526

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I   +++E        + A  +R  +L  T   +   F+  ++  A   ++K    S
Sbjct: 527 GNGIDPMDVVE-------KYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWNFINKIWNAS 579

Query: 342 T--SKGIIDPAVLSAL 355
                 + + A  + +
Sbjct: 580 RFVIMNLPEDAAAAHM 595


>gi|309803196|ref|ZP_07697293.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308164704|gb|EFO66954.1| valine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  +K  E  +    P+     +  + +L  W  S        + W     GW  E +A 
Sbjct: 417 WYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSS--------ALWPFSTLGWPDEEAAD 468

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS    +     N+ +H    + +GRKMSKS 
Sbjct: 469 FKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSL 526

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I   +++E        + A  +R  +L  T   +   F+  ++  A   ++K    S
Sbjct: 527 GNGIDPMDVVE-------KYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWNFINKIWNAS 579

Query: 342 T--SKGIIDPAVLSAL 355
                 + + A  + +
Sbjct: 580 RFVIMNLPEDAAAAHM 595


>gi|288559384|ref|YP_003422870.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
 gi|288542094|gb|ADC45978.1| isoleucyl-tRNA synthetase IleS [Methanobrevibacter ruminantium M1]
          Length = 1143

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 18/105 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A        + +H   L+ EG+KMSKS GN +   E++E        + A V+R  +L  
Sbjct: 639 ALDQAPYNKVLMHGFVLDEEGKKMSKSLGNVVQPEEVIE-------KYGADVLRFYLLWA 691

Query: 315 HYREPID---FTVQRLTEAEILLS------KWPQTSTSKGIIDPA 350
              +P D   F    L   + + +       +  T  +    DPA
Sbjct: 692 --CKPWDDLKFVWDELNNVKKMFNILWNVYVFSTTYMALDEFDPA 734


>gi|239996319|ref|ZP_04716843.1| methionyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
          Length = 675

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 58/181 (32%), Gaps = 46/181 (25%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H  G D+ + H     A    A   + T  NI   +GF+ + G KMSKS G FI     L
Sbjct: 289 HFIGKDITYFHCLFWPAMLEGAGYRKPTGVNI---HGFVTVNGAKMSKSRGTFIKGRTYL 345

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYRE--------PIDFTV--------------QRLTEA 330
           +             +R         +         ++FT                  +  
Sbjct: 346 D-------HLNPEYLRYYFAS----KLGDGVTDIDLNFTDFAQKVNSDLVGKVVNIASRC 394

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK------LARESTKNHDLLPI 384
              ++K      S+ +I+P +++      N   +I AL +        RE     D    
Sbjct: 395 ASFITKRFDGKLSENVIEPELIAEFQ---NASESIAALFEKRKYHQAVREIMALADKANQ 451

Query: 385 F 385
           F
Sbjct: 452 F 452


>gi|238028413|ref|YP_002912644.1| isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877607|gb|ACR29940.1| Isoleucyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 945

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 25/122 (20%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I  +E+            A ++RL +  T Y   +  + + 
Sbjct: 612 HGFTVDGEGRKMSKSLGNGIDPHEVSNRLG-------AEIVRLWIASTDYSGELAISEEI 664

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
           L        +   T          +L+ L +              A+++    + L I  
Sbjct: 665 LKRVTEGYRRIRNTLR-------FLLANLSD-----------FDYAKDALPAAEWLEIDR 706

Query: 387 AS 388
            +
Sbjct: 707 YA 708


>gi|225630185|ref|YP_002726976.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
 gi|225592166|gb|ACN95185.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
          Length = 568

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 46/157 (29%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKI------IERAR 84
           PT     HIG+AR  +  DVL  LL+    +    Y  N     ID  I       + A 
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKSVYLRYKEAL 188

Query: 85  QEHPSIPINDAISI--------ITSKNTQQFV---------------------KDTTRLA 115
            E  SI                +  K  ++F+                     +D   L 
Sbjct: 189 GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQIIREYTLSFILELIKEDMNLLG 248

Query: 116 CLAPTHQPRATNHI----PQMIYLIQNIILHGHAYEA 148
                H    + +      ++   I+ +   G  YE 
Sbjct: 249 V---NHDVFTSEYELQKSGKIEESIKILSDKGLVYEG 282


>gi|145632299|ref|ZP_01788034.1| leucyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229844024|ref|ZP_04464165.1| leucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|144987206|gb|EDJ93736.1| leucyl-tRNA synthetase [Haemophilus influenzae 3655]
 gi|229813018|gb|EEP48706.1| leucyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLDSEQDRAVMA 751


>gi|15603079|ref|NP_246151.1| leucyl-tRNA synthetase [Pasteurella multocida subsp. multocida str.
           Pm70]
 gi|13431887|sp|P57923|SYL_PASMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12721568|gb|AAK03298.1| LeuS [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 860

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 51/141 (36%), Gaps = 43/141 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLS----AL-----------YND----- 358
             +  A+  L +            ++  ++P  LS    AL            +D     
Sbjct: 661 SGVEGAKRFLGRLWNLVFEYNKHPAETTVEPTALSSAQKALRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKN 378
             NT  AI A+ +L  + TK 
Sbjct: 721 TFNT--AIAAIMELMNKLTKA 739


>gi|145634089|ref|ZP_01789800.1| leucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|148826435|ref|YP_001291188.1| leucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229845972|ref|ZP_04466084.1| leucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|166231611|sp|A5UDF4|SYL_HAEIE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145268533|gb|EDK08526.1| leucyl-tRNA synthetase [Haemophilus influenzae PittAA]
 gi|148716595|gb|ABQ98805.1| leucyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|229810976|gb|EEP46693.1| leucyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|309973583|gb|ADO96784.1| Leucyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLDSEQDRAVMA 751


>gi|332234873|ref|XP_003266628.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 4 [Nomascus
           leucogenys]
          Length = 1122

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 20/196 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 610 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 667

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ 339
           GNF+T+ + ++        + A  +RLA+      + +   +F         + L  W +
Sbjct: 668 GNFLTLTQAID-------KFSADGMRLALADAG--DTVEDANFVETMADAGILRLYTWVE 718

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                     ++ S   N  N       L+    ++ +N++ + +F  +    G    + 
Sbjct: 719 WVKEMVANWDSLRSGPANTFNDRVFASELNAGIIKTDQNYEKM-MFKEALKT-GFFEFQA 776

Query: 400 HLNKNISIAIEKLVQE 415
             +K   +A+E + +E
Sbjct: 777 AKDKYRELAVEGMHRE 792


>gi|331701956|ref|YP_004398915.1| methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
 gi|329129299|gb|AEB73852.1| Methionyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
          Length = 675

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 47/153 (30%), Gaps = 39/153 (25%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYRE 318
                   +G+L ++  KMSKS GN I    L++        +    +R  +L    Y  
Sbjct: 293 PLPKTVYGHGWLLMKDGKMSKSKGNVIYPETLVDR-------YGLDALRYYLLRAMPYAN 345

Query: 319 PIDFTVQ---------RLTEAEILLSK------------WPQTSTSKGIIDPAVLS---- 353
              FT +            +   LL++             P         D  +      
Sbjct: 346 DGLFTPEDFIDRLNFDLANDLGNLLNRTVSMINKYDGGILPAYKAGVNEADKELEETAAT 405

Query: 354 ------ALYNDLNTVSAIQALHKLARESTKNHD 380
                  L NDL+   A+    KL  ++ K  D
Sbjct: 406 VIANYKQLMNDLHFSDALAETWKLVSQTNKYID 438


>gi|324990383|gb|EGC22321.1| leucine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 858

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 38/213 (17%), Positives = 68/213 (31%), Gaps = 56/213 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 634 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 686

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 687 DRVDRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 742

Query: 378 NHDL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLV 413
              L        + +    A  L  E+ +                    K +   +E +V
Sbjct: 743 EEKLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGESISYVTWPTYDESKLVEAEVEIVV 802

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
           Q +  +   K   + D  R++L+     L D K
Sbjct: 803 QIKGKVRA-KLVVTKDLSREELQE--IALSDEK 832


>gi|308171929|ref|YP_003918634.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307604793|emb|CBI41164.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
          Length = 663

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A +E      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEEE------NITPQAY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIP-QMIYLI-QNIILHGHAYEANNEIIFDTS 157
             +   +  K   +L         R T     ++I  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAVAEIQKLWKQLDISHDDF-IRTTESRHKEIIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|290580940|ref|YP_003485332.1| isoleucine-tRNA synthetase [Streptococcus mutans NN2025]
 gi|254997839|dbj|BAH88440.1| isoleucine-tRNA synthetase [Streptococcus mutans NN2025]
          Length = 930

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 64/168 (38%), Gaps = 22/168 (13%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S   +      ++      L+ +G KMSKS GN I
Sbjct: 545 LGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMSKSKGNII 604

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + N++        + + A ++RL +        +  +++ L +      K   T      
Sbjct: 605 SPNDV-------AKQYGAEILRLWVASVDTDSDVRVSMEILGQVSETYRKIRNTLR---- 653

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHIL 392
                L A   D N       ++K+A E  ++ D  +L  FN    ++
Sbjct: 654 ----FLIANTTDFN-----PYINKIAFEDLRSVDKYMLIKFNQLVAVI 692


>gi|229145180|ref|ZP_04273571.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
 gi|228638267|gb|EEK94706.1| Lysyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
          Length = 517

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+   M+VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNK-EMFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACL 117
             R +    D    +     P   I D     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|187663990|sp|A7MZT3|SYM_VIBHB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 686

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                 +      +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 348 ------KHLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L  +          ++    + +  +L         I  I    + 
Sbjct: 394 SRNAGFISKRFEGKLAENFAEPELY---NEFVAAADRIAELYETREFGRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 451 ANQYVDE 457


>gi|163747198|ref|ZP_02154553.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161379473|gb|EDQ03887.1| valyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 977

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 61/310 (19%), Positives = 108/310 (34%), Gaps = 72/310 (23%)

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
           E +     P K  +++P     W  S          W  G  GW  E +A    Y     
Sbjct: 529 EAEAQAMAPGKTLRRDPDVLDTWFSS--------GLWPIGTLGW-PEQTAELEKYFPTS- 578

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
            +   G D+IF      +         +    +++H    + +G+KMSKS GN +   EL
Sbjct: 579 -VLVTGFDIIFFWVARMMMMQYAVVDQKPFDTVYVHALVRDEKGKKMSKSLGNVLDPLEL 637

Query: 292 LETKKFGGRSWPAPVIRLAM-----------LMTH----YRE------------PIDFTV 324
           ++        + A  +R  +           L T     YR              ++   
Sbjct: 638 IDD-------YGADAVRFTLTSMAAMGRDLKLSTQRIAGYRNFGTKLWNAHRFAEMNNVF 690

Query: 325 QRLTEA----EILLSKWPQTSTSKGIIDPAVLSALYND-LN-TVSAIQAL---------H 369
             +  A    +  L+KW    T++  I   V +AL N   N   +A+ A           
Sbjct: 691 DSMPAAMPQPQATLNKWIVGETAR--IREEVDAALGNFRFNDAANALYAFVWGKVCDWYV 748

Query: 370 KLARESTKNH--DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ---ERLILLKMKK 424
           +L++   ++   +        A +L  E C   L+  +    E+L Q   +R  LL +  
Sbjct: 749 ELSKPLLQDDAPEAAETRATMAWVL--EQCLVLLHPIMPFITEELWQTTTKREQLLALTD 806

Query: 425 F---SSADYI 431
           +   ++AD +
Sbjct: 807 WPTYTTADLL 816


>gi|153810768|ref|ZP_01963436.1| hypothetical protein RUMOBE_01152 [Ruminococcus obeum ATCC 29174]
 gi|149833164|gb|EDM88246.1| hypothetical protein RUMOBE_01152 [Ruminococcus obeum ATCC 29174]
          Length = 800

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 58/166 (34%), Gaps = 26/166 (15%)

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
            F HH   +      +  E  A   I    L  +G KMSKS GN +   +++E       
Sbjct: 545 RFWHH--FLYDLGVVNTPEPYAKRSIQGLILGPDGDKMSKSKGNVVDPLDIVE------- 595

Query: 301 SWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAV------ 351
            + A  +R   + M  Y     ++   +   +  L +    +   S+  +   +      
Sbjct: 596 EYGADTLRTYVLFMGDYGAATPWSDSSVKGCKKFLDRVAGLTDILSEEPVSEELEMKIHR 655

Query: 352 -LSALYND-----LNTVSA--IQALHKLARESTKNHDLLPIFNASA 389
            +  + +D      NT  A  +  ++++  E     + L IF    
Sbjct: 656 TIKKVSSDIENLKFNTAIASLMTLINEITAEGHIGKEDLSIFIKLL 701


>gi|146284080|ref|YP_001174233.1| leucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
 gi|145572285|gb|ABP81391.1| leucyl-tRNA synthetase [Pseudomonas stutzeri A1501]
          Length = 906

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 36/140 (25%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 67  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--KNVLQPMGWDAFGMPA 124

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A +         A +  T +N          L  LA       T   P      Q  
Sbjct: 125 ENAAMKNQV------APAKWTYENIAYMKAQLKSLG-LAIDWSREVTTCKPDYYRWEQWL 177

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 178 FTRLFEKGVIYRKNGTVNWD 197



 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++       ++ A   RL M+      P    ++++   +  A 
Sbjct: 664 EKMSKSKNNGVDPQAMID-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 713

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +      S G+     ++AL ++   V   +A+H   ++++ +      FN A
Sbjct: 714 RFLRRVWRLAHAHVSAGLPGALDVAALNDEQKAVR--RAIHLAIKQASTDVGQHHKFNTA 771

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQE 415
            A ++ +    E            L+QE
Sbjct: 772 IAQVMTLMNVLEKAPTAGEQD-RALLQE 798


>gi|118580151|ref|YP_901401.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
 gi|166231626|sp|A1APS3|SYL_PELPD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118502861|gb|ABK99343.1| leucyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
          Length = 823

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 68/174 (39%), Gaps = 31/174 (17%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTH 315
             E   N+ +  G +  +G KMSKS GN +  N L+E        + A   RL  +    
Sbjct: 562 CSEPFTNL-LTQGMVIKDGAKMSKSKGNVVDPNALIER-------YGADTARLFSLFAAP 613

Query: 316 YREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAI-------QA 367
             + +D+  Q +  +   L++ W   +    +I  A        L+            +A
Sbjct: 614 PEKDLDWNDQGVDGSFRFLNRVWKLVNDRLELISGAAP------LDVPGLTGEERTLRRA 667

Query: 368 LHKLARESTKNHDLLPIFN-ASAHILGI-------EVCKEHLNKNISIAIEKLV 413
           +HK  R+ T++ +    FN A A ++ +       ++        +  A+E LV
Sbjct: 668 VHKTIRKVTEDIEGRFHFNTAIAAVMELLNVLQSADLSTPQAGAVMKEALESLV 721


>gi|296503129|ref|YP_003664829.1| class 1 lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|296324181|gb|ADH07109.1| class 1 lysyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 517

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 34/113 (30%), Gaps = 14/113 (12%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+   M+VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNK-EMFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACL 117
             R +    D    +     P   I D     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|27904642|ref|NP_777768.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|38605104|sp|Q89AU9|SYI_BUCBP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|27904039|gb|AAO26873.1| isoleucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 939

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++   +KMSKS GN +  +E++ T         + ++RL 
Sbjct: 577 ISAAISNQTPYKKVITHGFVVDKNKKKMSKSIGNTVHPSEVINTLG-------SDILRLW 629

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
              T+Y + +  + + L        +   T+ 
Sbjct: 630 TASTNYSKEMSISQETLIHISDYYRRIRNTAR 661


>gi|85715531|ref|ZP_01046512.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
 gi|85697726|gb|EAQ35602.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
          Length = 695

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 19/135 (14%)

Query: 35  VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           VY     HIG+A   I  D L R  R     K V ++    +   K+++ A++E      
Sbjct: 193 VYPNGAPHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGQKMVQTAQRE------ 244

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYE 147
           N +   + ++N +   K    L   +     R +       + ++    + +  +G  Y 
Sbjct: 245 NISALELATRNAELLRKLDETLHI-SFDRFIRTSESAHHRSVQEIW---KRMAENGDIYL 300

Query: 148 ANNEIIFDTSSIPNY 162
           +N    +       Y
Sbjct: 301 SNYSGWYSVRDEAYY 315


>gi|172057960|ref|YP_001814420.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|254782405|sp|B1YIS7|SYI_EXIS2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|171990481|gb|ACB61403.1| isoleucyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 911

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 35/91 (38%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ +GRKMSKS GN I   +++       + + A ++RL +
Sbjct: 567 SVATTGKAPYKAVVSHGFVLDGQGRKMSKSIGNTIAPIQIM-------QQFGAEILRLWV 619

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
               Y+  +  ++    +      K   T  
Sbjct: 620 ASVDYQSDVRASMDNFKQVSESYRKIRNTVR 650


>gi|327191133|gb|EGE58178.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 968

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 617 SAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 669

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA---- 364
           + + Y + +      +        K   T          D     AL    N        
Sbjct: 670 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDKGEEIALA---NLPELEQLM 726

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L +L RE+    D   I  A      +E+   + +
Sbjct: 727 LHRLAELDQLVRENYDAFDFKKIARALIDFANVELSAFYFD 767


>gi|317485261|ref|ZP_07944142.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
 gi|316923552|gb|EFV44757.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
          Length = 551

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   V D L R+LR+   +    Y  N      +++  +         
Sbjct: 127 PT--GPLHIGHGRGAAVGDTLARILRFAGYDVTTEYYINDAGRQMRLLGLSIWLRAKELA 184

Query: 93  NDAISIITSKNTQQFVKDTTR 113
             A+          ++ D  R
Sbjct: 185 GIAVEWPEDYYRGSYIIDIAR 205


>gi|313608433|gb|EFR84369.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
          Length = 532

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 285 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 337

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 338 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 373


>gi|307297529|ref|ZP_07577335.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916789|gb|EFN47171.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 635

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 48/139 (34%), Gaps = 23/139 (16%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + YV  P  Y     HIG+A   IV DV+ R  R    +    +    TD          
Sbjct: 3   KFYVTTPIYYINSEPHIGSAYSTIVADVIARYRRLSGYD---VFFLTGTD---------- 49

Query: 85  QEHPSIPINDAIS--IITSKNTQQFVKDTTRL---ACLAPTHQPRATN--HIPQMIYLIQ 137
            EH    +N+AI   +   K   +  +    L     L      R T+  H+  +   + 
Sbjct: 50  -EHGQKVLNEAIERNVEAQKYCDEMAEKFKALWKELELTNDAFVRTTDEYHMKTVQTFVS 108

Query: 138 NIILHGHAYEANNEIIFDT 156
            +  +G  Y+   E  +  
Sbjct: 109 KLKENGDVYKGKYEGWYCI 127


>gi|300721316|ref|YP_003710587.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
           [Xenorhabdus nematophila ATCC 19061]
 gi|297627804|emb|CBJ88335.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
           [Xenorhabdus nematophila ATCC 19061]
          Length = 670

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 15/128 (11%)

Query: 33  PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK----IIERARQEH 87
           PT     H+G+   P +  DVL R+L         T V + T  DD     +   A+++ 
Sbjct: 130 PTPNGDLHLGHLSGPYLAGDVLKRVLLQSG-----TSVHHGTGRDDNQTYVVTSAAKEQR 184

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                 D  +   ++  Q F  D   L             +   + + I+ +      YE
Sbjct: 185 QPTESADFYASAINETWQGFGIDFD-LFITPDNQG----EYADFVHHYIELLYKKDFIYE 239

Query: 148 ANNEIIFD 155
                  D
Sbjct: 240 KETTAYVD 247


>gi|259501662|ref|ZP_05744564.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|302191130|ref|ZP_07267384.1| valyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806332|ref|ZP_07700345.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|309807726|ref|ZP_07701660.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|309809959|ref|ZP_07703807.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|312871976|ref|ZP_07732058.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|312874665|ref|ZP_07734689.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921098|ref|ZP_08277621.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|259166947|gb|EEW51442.1| valine-tRNA ligase [Lactobacillus iners DSM 13335]
 gi|308167316|gb|EFO69482.1| valine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308168986|gb|EFO71070.1| valine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|308169747|gb|EFO71792.1| valine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|311089895|gb|EFQ48315.1| valine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|311092553|gb|EFQ50915.1| valine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|328935005|gb|EGG31494.1| valine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 41/196 (20%), Positives = 73/196 (37%), Gaps = 22/196 (11%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  +K  E  +    P+     +  + +L  W  S        + W     GW  E +A 
Sbjct: 417 WYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSS--------ALWPFSTLGWPDEEAAD 468

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS    +     N+ +H    + +GRKMSKS 
Sbjct: 469 FKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSL 526

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I   +++E        + A  +R  +L  T   +   F+  ++  A   ++K    S
Sbjct: 527 GNGIDPMDVVE-------KYGADSLRWFLLNGTAPGQDTRFSYTKMDSAWNFINKIWNAS 579

Query: 342 T--SKGIIDPAVLSAL 355
                 + + A  + +
Sbjct: 580 RFVIMNLPEDAAAAHM 595


>gi|300024113|ref|YP_003756724.1| isoleucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525934|gb|ADJ24403.1| isoleucyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
          Length = 1050

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G+KMSKS GN +   +++           A ++RL +
Sbjct: 693 SCGTRGDAPYDVVLTHGFVLDEKGQKMSKSLGNVVAPQDVIAKSG-------ADILRLWV 745

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +    + L        K   T
Sbjct: 746 AASDYSDDLRIGPEILKTFSETYRKLRNT 774


>gi|253996891|ref|YP_003048955.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8]
 gi|253983570|gb|ACT48428.1| methionyl-tRNA synthetase [Methylotenera mobilis JLW8]
          Length = 690

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T  I+ H GFL + G KMSKS G FIT    LE
Sbjct: 292 HFIGKDILYFHALFWPATLEYSEHRKPT-QIFAH-GFLTVNGEKMSKSRGTFITARSYLE 349

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
             K          +R       Y   ++ T++ + 
Sbjct: 350 HIK------TPEYLRYY-----YAAKLNSTMEDID 373


>gi|228910874|ref|ZP_04074683.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228848825|gb|EEM93670.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 544

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--EDVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRDLGFTY-DCYTRTDSEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|168493559|ref|ZP_02717702.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
 gi|183576284|gb|EDT96812.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
          Length = 930

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVS---- 363
                   +  ++  L++      K   T      +    +PA  +  Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDTVAYDELRSVDKYMT 682

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                L K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 ICFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|332978083|gb|EGK14821.1| valine--tRNA ligase [Desmospora sp. 8437]
          Length = 884

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 46/113 (40%), Gaps = 10/113 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+I+      I  +      +   N+ IH    + EGRKMSKS GN +   E+
Sbjct: 484 DVLVTGYDIIYFWVARMIFTALEFTGSKPFKNVLIHGLVRDAEGRKMSKSLGNGVDPMEV 543

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYR--EPIDFTVQRLTEAEILLSKWPQTST 342
           +E        + A  IR  ML T       + F  +R+  A    +K    S 
Sbjct: 544 IE-------KYGADAIR-FMLSTGITPGNDMRFRWERVESARNFANKIWNASR 588


>gi|322378816|ref|ZP_08053242.1| arginyl-tRNA synthetase [Helicobacter suis HS1]
 gi|321148740|gb|EFX43214.1| arginyl-tRNA synthetase [Helicobacter suis HS1]
          Length = 536

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 47/324 (14%), Positives = 91/324 (28%), Gaps = 63/324 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  D    L R+        Y  N      K++  +         
Sbjct: 119 PT--GPLHIGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSLWLAICEMQ 176

Query: 93  NDAISIITSKNTQQFVKDTTR--------LACLAPTHQPR----ATNHIPQMIY------ 134
           +  +   T      ++ +  +        L    P         A   +   I       
Sbjct: 177 HLKVEYPTEYYRGAYINELAQKALEHFPDLNNNDPNLYATLGDFAKEVVLAQIEQSLADL 236

Query: 135 -LIQNIILHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
            ++        A +    E+            F  ++  +  M     ++  +KN  DF 
Sbjct: 237 GIVIENYASERAMFAHQEEVFKRLEQAGGVYEFEGKRWLKSSMFGDEKDRVIRKNDGDFT 296

Query: 193 LWKRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
                   +  + +  + +G                    +I G        HH   +A+
Sbjct: 297 ----YIAGDITYHDYKFKQG---------------FDHYINIFGAD------HHGY-VAR 330

Query: 252 SCCADRIEKTANIWIHNGFLNL-----EGR--KMSKSNGNFITINELLETKKFGGRSWPA 304
              A +        +    + +      G+  KMSK  GN + ++++LE           
Sbjct: 331 IKAALQFLGYEAQKLEVLLVQMVALLQNGKPYKMSKRAGNSVLLSDVLEDMGK------- 383

Query: 305 PVIRLAMLMTHYREPIDFTVQRLT 328
             +R   L       ++F +  L 
Sbjct: 384 DALRFVFLSKKLDTHLEFDIASLQ 407


>gi|313496978|gb|ADR58344.1| IleS [Pseudomonas putida BIRD-1]
          Length = 943

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 17/124 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++  T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDENGRKMSKSLGNTIEPEKVNNTLG-------ADILRLWVS 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQAL 368
            T Y   +  + Q L  +     +   T+    ++    DPA       DL     + AL
Sbjct: 637 ATDYSGEMAVSEQILQRSADAYRRIRNTARFLLSNLSGFDPAR------DLLAPEDMLAL 690

Query: 369 HKLA 372
            + A
Sbjct: 691 DRWA 694


>gi|260463256|ref|ZP_05811457.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259030846|gb|EEW32121.1| isoleucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 989

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 68/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +GRKMSKS GN +   ++
Sbjct: 613 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYDTVVTHGFTMDEDGRKMSKSLGNTVVPQDV 672

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           +       +   A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 673 I-------KQSGADILRLWVVTTDY-----WEDQRLGKNVLQTNIDAYRKLRNTVRWMLG 720

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +   L A+                +  L ++ R+     +   I  A    + 
Sbjct: 721 TLAHDDGENVPLEAM------PELERLMLHRLSELDEVVRQGYDAFEFKRITRALIDFMV 774

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 775 VELSAFYFD 783


>gi|258545170|ref|ZP_05705404.1| leucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258519595|gb|EEV88454.1| leucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 868

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 57/150 (38%), Gaps = 19/150 (12%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEI 332
              KMSKS  N +    L+       + + A   RL  M  +     ++++   +  A  
Sbjct: 629 GMEKMSKSKNNGVDPEALV-------KKYGADTARLYTMFTSPPESTLEWSESGVEGAHK 681

Query: 333 LLSK-WPQTSTSKGIIDPAVLS--ALYNDLNTVSAIQALHKLAR------ESTKNHDLLP 383
            L + W      +  +DPA +   AL +   T+    A+H+  R      E  + + ++ 
Sbjct: 682 YLKRLWAYAHDHRDQLDPAPVEHSALDSKHKTLR--HAIHEQLRSAQFDYERNQYNTVVS 739

Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLV 413
                 + LG    +E   ++  + I  L+
Sbjct: 740 SAMKILNTLGEVAPEEKRLRSEGLRILLLI 769



 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 36/140 (25%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  DPTREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMRG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYL 135
              A           A +  T  N          L       +  AT        +    
Sbjct: 87  ENAAMNHQV------APAAWTYSNIDYMKNQLKSLGFAIDWSRELATCKPDYYRWEQWLF 140

Query: 136 IQNIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 141 T-RLFEKGLIYRKNGTVNWD 159


>gi|222086010|ref|YP_002544542.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221723458|gb|ACM26614.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 517

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     + V ++    +   K+ + AR E        +   
Sbjct: 20  PHIGHAYELIATDAMARFQRLDG--RDVFFLTGTDEHGQKMQQTARAEGL------SPQE 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +N+ +F +   +L   +     R T 
Sbjct: 72  LADRNSAEF-QAMGKLLNSSNDDYIRTTE 99


>gi|195471089|ref|XP_002087838.1| GE14851 [Drosophila yakuba]
 gi|194173939|gb|EDW87550.1| GE14851 [Drosophila yakuba]
          Length = 1182

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 668 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDENKWPKGMRVNGHLLLNSAKMSKSDGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E ++        + A  +RL +
Sbjct: 726 LTLTEAVD-------KFSADGMRLCL 744


>gi|195145300|ref|XP_002013634.1| GL23293 [Drosophila persimilis]
 gi|194102577|gb|EDW24620.1| GL23293 [Drosophila persimilis]
          Length = 592

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 36/125 (28%), Gaps = 9/125 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ D   R  R  Y    V       +   KI + A      +    
Sbjct: 29  VNAAPHIGHLYSAVIADAHCRYQRLRYPTADVRLCTGTDEHGTKIQQAAANHKVPVD--Q 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               I+S+    + +              R T   H   +    + +   GH Y A    
Sbjct: 87  YCQEISSR----YREVFQAAHIHNDDF-IRTTEERHKQAVAQFWRTLHSRGHIYSAAYSG 141

Query: 153 IFDTS 157
            +  S
Sbjct: 142 WYCVS 146



 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 30/72 (41%), Gaps = 13/72 (18%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  ++    +++H+ +  ++G+KMSKS  N +             + +    +R  +L  
Sbjct: 296 AAGLQPPQQLYVHSHW-TVDGQKMSKSKHNVV-------DPVQAAQQYTMEGLRYFLLRE 347

Query: 314 --THYREPIDFT 323
              H     +++
Sbjct: 348 GVAH--SDGNYS 357


>gi|148828098|ref|YP_001292851.1| leucyl-tRNA synthetase [Haemophilus influenzae PittGG]
 gi|166231612|sp|A5UI62|SYL_HAEIG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148719340|gb|ABR00468.1| leucyl-tRNA synthetase [Haemophilus influenzae PittGG]
          Length = 861

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKAPLDSEQDRAVMA 751


>gi|145628146|ref|ZP_01783947.1| DNA polymerase III subunit delta [Haemophilus influenzae 22.1-21]
 gi|144979921|gb|EDJ89580.1| DNA polymerase III subunit delta [Haemophilus influenzae 22.1-21]
          Length = 428

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 178 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 227

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 228 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQ 287

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 288 TFNT--AIAAVMELMNKLTKASLESDQDRAVMA 318


>gi|222823651|ref|YP_002575225.1| valyl-tRNA synthetase [Campylobacter lari RM2100]
 gi|222538873|gb|ACM63974.1| valyl-tRNA synthetase [Campylobacter lari RM2100]
          Length = 870

 Score = 41.8 bits (97), Expect = 0.25,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 28/177 (15%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I               + A ++R  
Sbjct: 501 QSTNALNELPFKDIYLHALVKDEQGRKMSKSLGNVI-------DPVQSVDEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
            A+L    R  I  +  +L +     +K    S    + +         DLN  +    L
Sbjct: 554 LALLAIQGR-DIKLSNDKLIQVRNFTNKLYNASKFLLLNEEKF-----EDLNIENIKSTL 607

Query: 369 -------HKL----ARESTKNHDLLPIFNASAHILGIEVCKE--HLNKNISIAIEKL 412
                    L     RE+  N+      N        E C     L+K    +I++L
Sbjct: 608 AKYMLSRFNLCVKEVRENLDNYRFNDAANTLYRFFWDEFCDWGIELSKAEKSSIKEL 664


>gi|332141410|ref|YP_004427148.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327551432|gb|AEA98150.1| methionyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 675

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 57/181 (31%), Gaps = 46/181 (25%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H  G D+ + H     A    A   + T  NI   +GF+ + G KMSKS G FI     L
Sbjct: 289 HFIGKDITYFHCLFWPAMLEGAGYRKPTGVNI---HGFVTVNGAKMSKSRGTFIKGRTYL 345

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYRE--------PIDFTV--------------QRLTEA 330
           +             +R         +         ++FT                  +  
Sbjct: 346 D-------HLNPEYLRYYFAS----KLGDGVTDIDLNFTDFAQKVNSDLVGKVVNIASRC 394

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK------LARESTKNHDLLPI 384
              ++K      S  +I+P +++      N   +I AL +        RE     D    
Sbjct: 395 ASFITKRFDGKLSDNVIEPELIAEFQ---NASESIAALFEKRKYHQAVREIMALADKANQ 451

Query: 385 F 385
           F
Sbjct: 452 F 452


>gi|167957152|ref|ZP_02544226.1| valyl-tRNA synthetase [candidate division TM7 single-cell isolate
           TM7c]
          Length = 373

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 59/169 (34%), Gaps = 24/169 (14%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            G G D++FP     I             + + +   L+  G+KMSKS GN I   E+L 
Sbjct: 1   MGTGADILFPWISRMIMLGLYRTGKIPFKDTYFNGLVLDENGQKMSKSKGNVINPIEILS 60

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                   + +  +RL ++    R       Q L+  +I+  +          I   +  
Sbjct: 61  -------QYGSDALRLGIVAN--RSAAQ--NQALSMGKIIAGR--NYCNKLWNISRFIGD 107

Query: 354 ALYNDL---NTVSA--------IQALHKLARESTKNHDLLPIFNASAHI 391
            L +D    NT  A        I  L+K   E   + D      AS  +
Sbjct: 108 KLGDDFTPSNTPQAKSLADHWIISELNKTCLEIGNHLDKFRFAEASEAL 156


>gi|268325101|emb|CBH38689.1| valyl-tRNA synthetase [uncultured archaeon]
          Length = 810

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 30/92 (32%), Gaps = 7/92 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY------VRNITDIDDKIIERARQE 86
           PTV    HIG+A   I  D + R  R         +      +     ++ K  + A + 
Sbjct: 44  PTVSGNMHIGHAMAYIQADTIMRFQRMQGKNIFYPFGFDNNGLATELYVEKKTGKMAEEM 103

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
                I   +   +    Q+ ++D   L    
Sbjct: 104 SRQDFIELCLKE-SEIAAQRMLEDWKSLGISP 134


>gi|260466804|ref|ZP_05812989.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259029416|gb|EEW30707.1| leucyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 874

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 16/121 (13%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N ++  ++ +        + A   R  ML      P    +++T      A 
Sbjct: 629 EKMSKSKKNTVSPEDITD-------GYGADTARWFMLS---DSPPERDVEWTDDGAAGAH 678

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNHDLLPIFNASAH 390
             + +  +  ++       V  A  ++     A+  A HK+ +   ++ + L    A A 
Sbjct: 679 RFMQRIWRLVSTAAETLAGVKPAAADN-GEAGAVSKAAHKILKAVGEDIEKLAFNRAIAR 737

Query: 391 I 391
           I
Sbjct: 738 I 738


>gi|166367026|ref|YP_001659299.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
 gi|166089399|dbj|BAG04107.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
          Length = 537

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 9/82 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+H  G D++  H     A    A  +     ++ H GFL  +GRKM KS GN +   
Sbjct: 261 PIDLHLIGKDILRFHAIYWPAMLMSA-GLPLPKRVFGH-GFLTKDGRKMGKSLGNTLDPF 318

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
           +L++        + A  +R   
Sbjct: 319 DLVDR-------YGADAVRYYF 333



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 37/125 (29%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   IV DV+ R  R          V  IT  D+      + E  +     
Sbjct: 19  VNDIPHIGSAYTTIVADVMARWQRLQG-----NSVLLITGTDEH---GQKIERTAAAKGL 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
                  +    F     +L         R T    Q I     + +   G  Y    + 
Sbjct: 71  NPQEHCDRIATSFANLWAKLHIQY-DRFSRTTAPRHQAIVNEFFERVWEKGDIYLDRQQG 129

Query: 153 IFDTS 157
            +  +
Sbjct: 130 WYCVA 134


>gi|89099648|ref|ZP_01172522.1| leucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89085591|gb|EAR64718.1| leucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 805

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 44/133 (33%), Gaps = 15/133 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVSTKEPFQKLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++E+         A  +RL  M M      + ++   L  A   L + W    
Sbjct: 583 NVVNPDEIVESHG-------ADTLRLYEMFMGPLEASVAWSTNGLDGARRFLDRVWRLLI 635

Query: 342 TSKGIIDPAVLSA 354
            + G +   +  A
Sbjct: 636 DTDGNLHSRIKDA 648


>gi|186684281|ref|YP_001867477.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|238689431|sp|B2J7T9|SYL_NOSP7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|186466733|gb|ACC82534.1| leucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 871

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 42/144 (29%), Gaps = 17/144 (11%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
                +  + Y      Y     H+G+ R   + DV+ R  R       V +        
Sbjct: 26  TPSASNKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARFKRMQGY--RVIHPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP-RATNHIPQMIYL 135
                 A      I      +  T +N  Q  +   RL  L+   +   AT   P     
Sbjct: 84  LPAENAA------IDRGVPPAKWTYQNITQMRQQLQRLG-LSIDWECELATCS-PDYYKW 135

Query: 136 IQ----NIILHGHAYEANNEIIFD 155
            Q      +  G AY+    + +D
Sbjct: 136 TQWIFLQFLQAGLAYQKEAAVNWD 159


>gi|163802868|ref|ZP_02196757.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
 gi|159173408|gb|EDP58231.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
          Length = 686

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 61/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L  +          ++    + +  +L      S  I  I    + 
Sbjct: 394 SRNAGFISKRFEGKLAENFAEPELY---NEFVTAAGRIAELYETREFSRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 451 ANQYVDE 457


>gi|160933630|ref|ZP_02081018.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
 gi|156867507|gb|EDO60879.1| hypothetical protein CLOLEP_02484 [Clostridium leptum DSM 753]
          Length = 874

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 69/185 (37%), Gaps = 46/185 (24%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  ++ H    + +GRKMSKS GN I   E++E        + A  +R  ++  + 
Sbjct: 505 GDIPFKTVFFHGLVRDAQGRKMSKSLGNGIDPIEVIE-------KYGADALRFTLVTGN- 556

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-NDLNTVSAI------- 365
             P   + FT ++L  +    +K         I + A    +  +  +  + +       
Sbjct: 557 -SPGNDMRFTEEKLESSRNFANK---------IWNAARFIHMNIDGFDVKNELPESLTLE 606

Query: 366 -----QALHKLARESTKNHDLLPIFNASAHILGIEVCKEH---LNKNISIAIEKLVQERL 417
                 AL+ + +E T+N +           LGI V K +    ++     IE L + RL
Sbjct: 607 DQWIVSALNTVTKEVTENLEKYE--------LGIAVQKLYDFIWDQFCDWYIE-LAKTRL 657

Query: 418 ILLKM 422
           +    
Sbjct: 658 MAKDE 662


>gi|156975200|ref|YP_001446107.1| methionyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
 gi|156526794|gb|ABU71880.1| hypothetical protein VIBHAR_02927 [Vibrio harveyi ATCC BAA-1116]
          Length = 661

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 61/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L 
Sbjct: 266 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYL- 322

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                 +      +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 323 ------KHLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 368

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L  +          ++    + +  +L         I  I    + 
Sbjct: 369 SRNAGFISKRFEGKLAENFAEPELY---NEFVAAADRIAELYETREFGRAIREITALADK 425

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 426 ANQYVDE 432


>gi|148825859|ref|YP_001290612.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
 gi|187647723|sp|A5UBS8|SYM_HAEIE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148716019|gb|ABQ98229.1| methionyl-tRNA synthetase [Haemophilus influenzae PittEE]
          Length = 682

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|145636945|ref|ZP_01792609.1| DNA polymerase III subunit delta [Haemophilus influenzae PittHH]
 gi|145269803|gb|EDK09742.1| DNA polymerase III subunit delta [Haemophilus influenzae PittHH]
          Length = 428

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 178 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 227

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 228 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQ 287

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 288 TFNT--AIAAVMELMNKLTKAPLDSEQDRAVMA 318


>gi|145642100|ref|ZP_01797670.1| tellurite resistance protein TehB [Haemophilus influenzae R3021]
 gi|145273179|gb|EDK13055.1| tellurite resistance protein TehB [Haemophilus influenzae 22.4-21]
          Length = 548

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 156 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 213

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 214 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 258

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 259 SRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 318

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 319 YIDEKAPWVIAK 330


>gi|74316878|ref|YP_314618.1| methionyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123759136|sp|Q3SKG8|SYM_THIDA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|74056373|gb|AAZ96813.1| methionyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
           ATCC 25259]
          Length = 690

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 23/172 (13%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+++ H     A    +     TA ++ H GFL + G+KMSKS G FIT +  L
Sbjct: 286 VHFIGKDILYFHALFWPAMLKFSGHRLPTA-VYAH-GFLTVNGQKMSKSRGTFITASSYL 343

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ----RLTEAEILLSK------WPQTST 342
           +      +      +R       Y   ++ T++     L +    ++           S 
Sbjct: 344 D------QGLNPEWLRYY-----YAAKLNGTMEDIDLNLDDFVARVNSDLVGKFINIASR 392

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
           + G I       L + +  +  I      A     +++      A   I+ +
Sbjct: 393 TAGFIHKKFDGKLADGVGNIELIGEFQAAADTIAAHYEARDYAKALREIMAL 444


>gi|45190649|ref|NP_984903.1| AER043Cp [Ashbya gossypii ATCC 10895]
 gi|44983628|gb|AAS52727.1| AER043Cp [Ashbya gossypii ATCC 10895]
          Length = 873

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 51/182 (28%), Gaps = 26/182 (14%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           + +   MYV     Y     HIG+ R   + D L R  R    E  V +           
Sbjct: 43  EGTRPHMYVLSMFPYPSGMLHIGHLRVYTISDALNRFYRMKGYE--VVHPMGWDAFGLPA 100

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLI 136
              A      +    A +  T +N  +  +   D               T   P+     
Sbjct: 101 ENAA------LERGIAPADWTRQNIARMKQQKGDMLA----HFEWGREVTTCDPEYYRFT 150

Query: 137 QNII----LHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
           Q +      HG AY+   EI              +  ++D Q    R      K+    +
Sbjct: 151 QELFLELWHHGMAYKKEAEINWDPVDKT----VLANEQVDAQGRSWRSGALVEKRKLNQW 206

Query: 192 IL 193
            L
Sbjct: 207 FL 208


>gi|26987340|ref|NP_742765.1| isoleucyl-tRNA synthetase [Pseudomonas putida KT2440]
 gi|81442240|sp|Q88Q92|SYI_PSEPK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24981991|gb|AAN66229.1|AE016251_5 isoleucyl-tRNA synthetase [Pseudomonas putida KT2440]
          Length = 943

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 17/124 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++  T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDENGRKMSKSLGNTIEPEKVNNTLG-------ADILRLWVS 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQAL 368
            T Y   +  + Q L  +     +   T+    ++    DPA       DL     + AL
Sbjct: 637 ATDYSGEMAVSEQILQRSADAYRRIRNTARFLLSNLSGFDPAR------DLLAPEDMLAL 690

Query: 369 HKLA 372
            + A
Sbjct: 691 DRWA 694


>gi|332234869|ref|XP_003266626.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 2 [Nomascus
           leucogenys]
          Length = 1130

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 20/196 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 618 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 675

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ 339
           GNF+T+ + ++        + A  +RLA+      + +   +F         + L  W +
Sbjct: 676 GNFLTLTQAID-------KFSADGMRLALADAG--DTVEDANFVETMADAGILRLYTWVE 726

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                     ++ S   N  N       L+    ++ +N++ + +F  +    G    + 
Sbjct: 727 WVKEMVANWDSLRSGPANTFNDRVFASELNAGIIKTDQNYEKM-MFKEALKT-GFFEFQA 784

Query: 400 HLNKNISIAIEKLVQE 415
             +K   +A+E + +E
Sbjct: 785 AKDKYRELAVEGMHRE 800


>gi|327482397|gb|AEA85707.1| leucyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
          Length = 868

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 36/140 (25%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A +         A +  T +N          L  LA       T   P      Q  
Sbjct: 87  ENAAMKNQV------APAKWTYENIAYMKAQLKSLG-LAIDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 57/148 (38%), Gaps = 21/148 (14%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++       ++ A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQAMID-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-A 387
             L    +      S G+     ++AL ++   V   +A+H   ++++ +      FN A
Sbjct: 676 RFLRRVWRLAHAHVSAGLPGALDVAALNDEQKAVR--RAIHLAIKQASTDVGQHHKFNTA 733

Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQE 415
            A ++ +    E            L+QE
Sbjct: 734 IAQVMTLMNVLEKAPTAGEQD-RALLQE 760


>gi|317495329|ref|ZP_07953699.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914751|gb|EFV36227.1| isoleucyl-tRNA synthetase [Gemella moribillum M424]
          Length = 910

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 268 NGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
            GF+    G KMSKS GN I+ N++       G+   A +IRL      Y + +  +   
Sbjct: 585 AGFVMDGNGNKMSKSLGNVISPNDV-------GKQLGAEIIRLWSASVDYTQDVRISNDI 637

Query: 327 LTEAEILLSKWPQT 340
           L +      K   T
Sbjct: 638 LKQVSETYRKIRNT 651


>gi|315126748|ref|YP_004068751.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
 gi|315015262|gb|ADT68600.1| methionyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
          Length = 674

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 60/174 (34%), Gaps = 30/174 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A   + T N++ H GF+ + G KMSKS G FI     L+
Sbjct: 288 HFIGKDIIYFHSLFWPAMLEGAQFRKPT-NVFAH-GFVTVNGAKMSKSKGTFIKARTYLD 345

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------- 344
                  +     +R       Y   ++     +T+ ++ L  + Q   S          
Sbjct: 346 -------NLDPEFLRYY-----YAAKLN---SGITDLDLNLEDFAQRVNSDLVGKVVNIA 390

Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
               G I       L N +     +      +   T+ ++      A   I+ +
Sbjct: 391 SRCAGFITKKFDGKLSNTVMQPQLLAEFQNASATITEYYENREYSRAIREIMAL 444


>gi|298715272|emb|CBJ27921.1| Leucyl-tRNA Synthetase [Ectocarpus siliculosus]
          Length = 859

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 73/197 (37%), Gaps = 32/197 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H             +      E    + +H G  L  +G KMSKS 
Sbjct: 582 PVDLYVGGQEHAVLHLLYARFWHKVLHDLGHVKDPEPFQRL-VHQGMILGTDGEKMSKSR 640

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++++         A  +RL  M M     P++ T    TE    ++++    
Sbjct: 641 GNVINPDDIVDSDG-------ADALRLYEMFMG----PLEATKPWQTEQVAGVTRFRDRV 689

Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
                +G  D  +             +  LHK  ++ +++ D L    A + ++ +    
Sbjct: 690 YQLARRGAEDVELA---------PETLTILHKTMKKVSEDIDELAFNTAISALMVLTNHL 740

Query: 399 EHLNKNISIAIEKLVQE 415
               K    A+E LV+ 
Sbjct: 741 MTFEKPPREALEALVRM 757


>gi|257870820|ref|ZP_05650473.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
 gi|257804984|gb|EEV33806.1| leucyl-tRNA synthetase [Enterococcus gallinarum EG2]
          Length = 804

 Score = 41.8 bits (97), Expect = 0.26,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 53/180 (29%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++E        + A  +R+  M M      I +    L  +   L +  +   
Sbjct: 583 NVVNPDDVIE-------QYGADTLRMYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++   +                D      NT  AI  L     E+ K+  L
Sbjct: 636 DENGKMRDRITTFNDGKLSKVYNQTVKKVTEDFEQLHFNT--AISQLMVFVNEAYKSDAL 693


>gi|332234867|ref|XP_003266625.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 1 [Nomascus
           leucogenys]
          Length = 1176

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 73/196 (37%), Gaps = 20/196 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 664 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 721

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ 339
           GNF+T+ + ++        + A  +RLA+      + +   +F         + L  W +
Sbjct: 722 GNFLTLTQAID-------KFSADGMRLALADAG--DTVEDANFVETMADAGILRLYTWVE 772

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
                     ++ S   N  N       L+    ++ +N++ + +F  +    G    + 
Sbjct: 773 WVKEMVANWDSLRSGPANTFNDRVFASELNAGIIKTDQNYEKM-MFKEALKT-GFFEFQA 830

Query: 400 HLNKNISIAIEKLVQE 415
             +K   +A+E + +E
Sbjct: 831 AKDKYRELAVEGMHRE 846


>gi|324994299|gb|EGC26213.1| leucine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 833

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   SK ++                     +  L    NT  AI  L      + K
Sbjct: 662 DRVYRLLNSKELVTENSGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 717

Query: 378 NHDL 381
              L
Sbjct: 718 EEKL 721


>gi|300867846|ref|ZP_07112488.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
 gi|300334177|emb|CBN57664.1| methionyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
          Length = 535

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 14/96 (14%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+H  G D++  H     A    A+       I+ H GFL  +GRKM K++GN I   
Sbjct: 262 PIDLHLIGKDILRFHAVYWPAMLMSANLPMPG-RIFGH-GFLTKDGRKMGKTDGNIIDPV 319

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
            L+         + +  +R   L     + I+F   
Sbjct: 320 ALVN-------QYGSDAVRYYFL-----KEIEFGED 343


>gi|209695662|ref|YP_002263591.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
 gi|226710892|sp|B6EIY5|SYM_ALISL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|208009614|emb|CAQ79910.1| methionyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
          Length = 686

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAGTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDIDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L ++          ++    S +  +L      S  I  I    + 
Sbjct: 394 SRNAGFITKRFDGKLSDNFVAPELY---NEFVAASDRIAELYETREFSRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ I  
Sbjct: 451 ANQYIDE 457


>gi|301059426|ref|ZP_07200347.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300446462|gb|EFK10306.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 1011

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 47/131 (35%), Gaps = 39/131 (29%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N +   EL++        + A  +R+  L  +   + ++++ Q +  +   L 
Sbjct: 765 KMSKSKKNVVDPQELIDR-------YGADTVRMFCLFASPPDKDLEWSEQGVEGSHRFLQ 817

Query: 336 K--------WPQTSTSKGIIDP---------------AVLSALYND------LNTVSAIQ 366
           +             T KG  +                  +  + +D       NT  AI 
Sbjct: 818 RIWRLVTDNLEDLKTVKGFDEKTELQEPLKSVHRKTHETIKKVTDDIENRFHFNT--AIS 875

Query: 367 ALHKLARESTK 377
           A+ +L  E+ +
Sbjct: 876 AVMELVNETNQ 886


>gi|254456291|ref|ZP_05069720.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083293|gb|EDZ60719.1| valyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 875

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 8/85 (9%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-TH 315
             E   +I++H    + +G+KMSKS GN I   +L+E        + A  +R  +L    
Sbjct: 505 NKEPFKDIYVHALVRDEKGQKMSKSKGNVIDPLDLIE-------KYSADALRFTLLSMAS 557

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
               +  +  R+      L+K    
Sbjct: 558 PGTDVKLSEDRVKGYRNFLNKLWNA 582


>gi|171463853|ref|YP_001797966.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193391|gb|ACB44352.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 556

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 31/170 (18%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 N++ H GFL ++G KMSKS G  I+ N ++E        +     R        
Sbjct: 319 GYRTPTNVFAH-GFLTVDGEKMSKSRGTLISANSVIEC------GFNPEWFRYYFATK-- 369

Query: 317 REPIDFTVQRLT------EAEI---LLSKWPQ-TSTSKGIIDPAV-----LSALYNDLNT 361
              ++ +++ L        A +   LL K+    S S G +           A+ N L  
Sbjct: 370 ---LNDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFGGVVSDEAMNNPL-- 424

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           +  I A  +   E  +  +          +   +     +++N    I K
Sbjct: 425 LKEIAAASEKIAELYEGREYAKALRTVMEL--ADKVNGFVDENKPWEIAK 472


>gi|148243311|ref|YP_001228468.1| isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
 gi|147851621|emb|CAK29115.1| Isoleucyl-tRNA synthetase [Synechococcus sp. RCC307]
          Length = 959

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 586 SVAVNGKAPYKRVLTHGFTLDEKGRKMSKSLGNVVDPAVIVEGGKNQKQEPPYGADVLRL 645

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      + +   +  K   T+ 
Sbjct: 646 WVSSVDYSADVPLGPGIVKQLADVYRKVRNTAR 678


>gi|76801248|ref|YP_326256.1| methionyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|121724492|sp|Q3IT47|SYM_NATPD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76557113|emb|CAI48687.1| methionine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 698

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 12/103 (11%)

Query: 16  TEFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
            EF    P+ +    CG P      H+G+ R  +  D   R L      + V +V     
Sbjct: 3   EEFPTETPAVV---TCGLPYANGDLHVGHLRTYVSGDAYARALESLG--QSVAFVSGSDM 57

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
               I   A +E               +  +Q+ +   +    
Sbjct: 58  HGTPIAVNAAEE------GVDPESFAVEYHEQYEETFPQFNIE 94


>gi|14590903|ref|NP_142976.1| isoleucyl-tRNA synthetase [Pyrococcus horikoshii OT3]
 gi|6647822|sp|O58792|SYI_PYRHO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|3257481|dbj|BAA30164.1| 1066aa long hypothetical isoleucyl-tRNA synthetase [Pyrococcus
           horikoshii OT3]
          Length = 1066

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E++E              R 
Sbjct: 598 AASVIAFDTVPYRRVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGR-------DTFRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + + +   +L+
Sbjct: 651 YMLWA--TNPWENLKFSWKGVEQVRRMLN 677


>gi|330805977|ref|XP_003290952.1| leucyl-tRNA synthetase [Dictyostelium purpureum]
 gi|325078913|gb|EGC32540.1| leucyl-tRNA synthetase [Dictyostelium purpureum]
          Length = 1061

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 29/70 (41%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI   G DLI  H    +         +        NGF+ L G KMSKS GNF+T+ 
Sbjct: 665 PVDIRVSGADLIQNHLTFFLYTHAAMFEQKFQPKSIRANGFVLLNGNKMSKSTGNFLTLA 724

Query: 290 ELLETKKFGG 299
           + +      G
Sbjct: 725 DAITKFSADG 734


>gi|256833172|ref|YP_003161899.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
 gi|256686703|gb|ACV09596.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
          Length = 538

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 36/120 (30%), Gaps = 18/120 (15%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DVL R  R    +     V  +T  D+   +  R  H +     
Sbjct: 17  VNDAPHIGHAYTTVAADVLTRWHRQRQHD-----VWFLTGTDEHGEKVMRTAHAN---GV 68

Query: 95  AISIITSKNTQQ----FVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA 148
                  K  ++     +               R T   H   +   I  +   G  Y+ 
Sbjct: 69  TPQQWADKLVKESWLPVLDTIDARN----DDFIRTTEQRHERAVQKFISQLHDQGDIYQG 124


>gi|190890541|ref|YP_001977083.1| isoleucyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190695820|gb|ACE89905.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 968

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 617 SAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 669

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA---- 364
           + + Y + +      +        K   T          D     AL +           
Sbjct: 670 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDKGEEIALAD---LPELEQLM 726

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L +L RE+    D   I  A      +E+   + +
Sbjct: 727 LHRLAELDQLVRENYDAFDFKKIARALIDFANVELSAFYFD 767


>gi|134094085|ref|YP_001099160.1| isoleucyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166229743|sp|A4G3E6|SYI_HERAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|133737988|emb|CAL61033.1| isoleucine tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Herminiimonas arsenicoxydans]
          Length = 959

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ EG+KMSKS GN +   ++ ++         A ++RL +
Sbjct: 609 SSMLNGHAPYKALLTHGFVVDGEGKKMSKSKGNVVAPQKVSDSLG-------ADILRLWV 661

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y   +  + + L        +   T
Sbjct: 662 AATDYSGELSISDEILKRVTESYRRIRNT 690


>gi|21429196|gb|AAM50317.1| SD07726p [Drosophila melanogaster]
          Length = 1182

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 668 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDENKWPKGMRVNGHLLLNSAKMSKSDGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E ++        + A  +RL +
Sbjct: 726 LTLTEAVD-------KFSADGMRLCL 744


>gi|309804780|ref|ZP_07698844.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165890|gb|EFO68109.1| valine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 57/152 (37%), Gaps = 19/152 (12%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWESPWGRGRPGWHIECSAM 222
           +  +K  E  +    P+     +  + +L  W  S        + W     GW  E +A 
Sbjct: 417 WYNKKTGEMVVQEEAPKDIENWDQDNDVLDTWFSS--------ALWPFSTLGWPDEEAAD 468

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              Y      +   G D+IF      I QS    +     N+ +H    + +GRKMSKS 
Sbjct: 469 FKRYFPTNALV--TGYDIIFFWVSRMIFQSLHFTKRRPFENVVLHGLIRDEQGRKMSKSL 526

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           GN I   +++E        + A  +R  +L  
Sbjct: 527 GNGIDPMDVVE-------KYGADSLRWFLLNG 551


>gi|134093383|ref|YP_001098458.1| arginyl-tRNA synthetase [Herminiimonas arsenicoxydans]
 gi|166232794|sp|A4G1E2|SYR_HERAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|133737286|emb|CAL60329.1| putative arginyl-tRNA synthetase (ArgS) [Herminiimonas
           arsenicoxydans]
          Length = 577

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 52/316 (16%), Positives = 92/316 (29%), Gaps = 51/316 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+ R   + D +  L           +  N     I  +   +  RAR   
Sbjct: 134 PT--GPLHVGHGRQGALGDAMSSLFDAQGYAVTREFYYNDAGVQIATLATSVQARARGLK 191

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
           P        S       Q    D      ++ +     T      I  I++I     AY 
Sbjct: 192 PG-AEGWPESAYNGDYIQDIANDFLAKKTVSASDGLPVTASGD--IDDIESIRAFAVAYL 248

Query: 147 --EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--EKYHKKNPADFILWKRSTPMEP 202
             E + ++        NY        ++ K+   V    K  K    D  LW R+T    
Sbjct: 249 RREQDLDLQAFGVKFDNY-YLESSLYNDGKVAATVDALIKADKTYELDGALWLRTTDYRD 307

Query: 203 -------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
                    +  +    P   +H   +        +  ++ G        HH   IA+  
Sbjct: 308 DKDRVMKKSDGTYTYFVPDVAYH---TVKWQRGFTQAINVQGSD------HH-GTIARVR 357

Query: 254 CAD---------RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE---TKKFGGRS 301
                                +     N E  K+SK  G+++T+ +L+E    +   G+ 
Sbjct: 358 AGLQALDIGIPQGYPDYVLHKMVTVMRNGEEVKISKRAGSYVTLRDLIEWSNGETVEGQE 417

Query: 302 WPA----PVIRLAMLM 313
                    +R  ++ 
Sbjct: 418 RDLTRGRDAVRFFLIS 433


>gi|91773806|ref|YP_566498.1| lysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|91712821|gb|ABE52748.1| Lysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 528

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 32/99 (32%), Gaps = 15/99 (15%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE------RARQ 85
           G T     HIGN R ++  D  YR +     E    Y   I D  D + +       +  
Sbjct: 27  GITPSGHIHIGNMREVVTADAAYRAMNDAGLESEFIY---IADNFDPLRKVYPFLPESYA 83

Query: 86  EHPSIPIND------AISIITSKNTQQFVKDTTRLACLA 118
           EH   PI++                  F++   +L    
Sbjct: 84  EHVGKPISEIPCPCGECKSYAEHFLTPFLEGLEKLGIHP 122


>gi|34557610|ref|NP_907425.1| leucyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|48428520|sp|Q7M926|SYL_WOLSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34483327|emb|CAE10325.1| LEUCYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 819

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   ++ +  G +  +G KMSKS GN +  +EL+E        + A   RL +L      
Sbjct: 568 EPFTHL-LTQGMVLKDGAKMSKSKGNVVDPDELIER-------FGADTARLFVLFAAPPT 619

Query: 318 EPIDFTVQRLTEAEILLSKW 337
             +++    +  A   + + 
Sbjct: 620 RELEWNDSAVEGAYRFIKRL 639


>gi|71034183|ref|XP_766733.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68353690|gb|EAN34450.1| methionyl-tRNA synthetase, putative [Theileria parva]
          Length = 563

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 52/173 (30%), Gaps = 21/173 (12%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y+ GP      H+G+A  ++  DVL R L     +  +        +       ++ +  
Sbjct: 81  YLNGP-----PHLGHAYTLVSSDVLKRFLILSGHDCKL--------LAGTDEHGSKIKTT 127

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH----GH 144
           +     +          QF K         P      + +  +    ++ +  +    GH
Sbjct: 128 AANFGYSPKEYVISMRNQFFKLYKAYDI-TPEIVVHTSEN--EHKSKVKRVFDNFLESGH 184

Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            Y   +   F       Y + S+    +  +G  V             +WKR 
Sbjct: 185 IYRGLHRGYFS-PKEDLYYTESKLINGKSPLGFDVTLVDEPAYFFKLDIWKRK 236


>gi|328869736|gb|EGG18113.1| hypothetical protein DFA_06780 [Dictyostelium fasciculatum]
          Length = 1545

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 35/144 (24%)

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ---ALHKLARE-STKNHDLL 382
           L +A     +  Q S     ++   + A+     T   I+   A+ K+  +   K  DL 
Sbjct: 599 LKDASSAQEQLDQQSKRIKDLEKE-IEAM-----TAKEIESRNAIDKMENDYLEKVRDLE 652

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM-----KKFSSADYI------ 431
              N +      +  K+  +      IEKL ++  I  K      K +   D I      
Sbjct: 653 SKLNQNEK----DGEKDQGDDEKDQEIEKLKEQLEIQKKESSRITKDYE--DKIIELERD 706

Query: 432 --------RKQLESKGFILEDYKN 447
                   R +L+ K   L+D ++
Sbjct: 707 LGETLSQERDKLKQKDVELKDMED 730


>gi|300766055|ref|ZP_07076024.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|300513257|gb|EFK40335.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 806

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 559 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 612 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 647


>gi|300214744|gb|ADJ79160.1| Valyl-tRNA synthetase [Lactobacillus salivarius CECT 5713]
          Length = 886

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS    +     N+ IH    + +GRKMSKS GN I   ++++  
Sbjct: 488 TGYDIIFFWVSRMIFQSVEFTKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVID-- 545

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 + A  +R  +        + + F+  ++  A   ++K    S         V+ 
Sbjct: 546 -----KYGADALRWFLSNGSAP-GQDVRFSYTKMDAAWNFINKIWNASR-------FVIM 592

Query: 354 ALYND--LNTVSA----------IQALHKLARESTKNHD 380
            L +D  L+   A          +  L+   R+ T+  D
Sbjct: 593 NLDSDVELSLPEASEWQLADKWILSRLNDTVRDVTRLFD 631


>gi|290893253|ref|ZP_06556240.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290557235|gb|EFD90762.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|307571243|emb|CAR84422.1| leuS [Listeria monocytogenes L99]
          Length = 806

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 559 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 612 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 647


>gi|284802052|ref|YP_003413917.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995194|ref|YP_003416962.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057614|gb|ADB68555.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060661|gb|ADB71600.1| leucyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 806

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 559 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 612 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 647


>gi|258612176|ref|ZP_05268358.2| leucyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|258609257|gb|EEW21865.1| leucyl-tRNA synthetase [Listeria monocytogenes F6900]
          Length = 806

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 559 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 612 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 647


>gi|255026411|ref|ZP_05298397.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 728

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 481 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 533

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 534 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 569


>gi|227892642|ref|ZP_04010447.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
 gi|227865513|gb|EEJ72934.1| valine--tRNA ligase [Lactobacillus ultunensis DSM 16047]
          Length = 879

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW    SA    Y      +   G D+IF      + QS          ++ +H    + 
Sbjct: 460 GWPDTDSADFKRYFPTNALV--TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDE 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +GRKMSKS GN +   ++++        + A  +R  +L  
Sbjct: 518 QGRKMSKSLGNGVDPMDVVD-------KYGADALRWFLLNG 551


>gi|256384445|gb|ACU79015.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385278|gb|ACU79847.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455269|gb|ADH21504.1| leucine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 804

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++     L  + RKMSKS GN I  +++++T         A  +RL  M M    
Sbjct: 562 EPFKRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHG-------ADALRLYEMFMGPLD 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYND-------------LNTV 362
             + ++   L  +   L++  +          +   L  +YND              NT 
Sbjct: 615 ASLPWSFDGLDASLKWLNRCYRMINKIEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNT- 673

Query: 363 SAIQALHKLARESTKNH 379
            AI  L  L     K  
Sbjct: 674 -AISQLMVLVNAIYKEE 689


>gi|186476942|ref|YP_001858412.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
 gi|184193401|gb|ACC71366.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
          Length = 726

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT N ++E
Sbjct: 313 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITANSVIE 370

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 371 T------GMNPEWLRYYF 382



 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 8/84 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         I+ +A QE            
Sbjct: 39  IHIGHLVEYIQTDIWVRALRMHGHE--VYYVGADDTHGTPIMLKAEQE------GITPKQ 90

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQ 122
           +  +  Q+  +D          + 
Sbjct: 91  LIDRVWQEHKRDFDNFGISFDNYY 114


>gi|154684557|ref|YP_001419718.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154350408|gb|ABS72487.1| MetS [Bacillus amyloliquefaciens FZB42]
          Length = 663

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A +E      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEEE------NITPQAY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIP-QMIYLI-QNIILHGHAYEANNEIIFDTS 157
             +   +  K   +L         R T     ++I  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAVAEIQKLWKQLDISHDDF-IRTTESRHKEIIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|86356478|ref|YP_468370.1| isoleucyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86280580|gb|ABC89643.1| isoleucyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 968

 Score = 41.8 bits (97), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 617 SAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 669

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA---- 364
           + + Y + +      +        K   T          D     AL +           
Sbjct: 670 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDKGEEIALAD---LPELEQLM 726

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L +L RE+    D   I  A      +E+   + +
Sbjct: 727 LHRLAELDQLVRENYDAFDFKKIARALIDFANVELSAFYFD 767


>gi|317127808|ref|YP_004094090.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315472756|gb|ADU29359.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 1030

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 12/86 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +GRKMSKS GN I   +L+       +++ A  +R A+
Sbjct: 565 SSLFTGKAPYKRVLSLGHILDEDGRKMSKSKGNVIDPIDLV-------KNYGADALRWAL 617

Query: 312 LMTHYREPID---FTVQRLTEAEILL 334
           L      P +   F+   +++A+  L
Sbjct: 618 LADS--APWNNKRFSENVVSQAKSKL 641


>gi|317152912|ref|YP_004120960.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943163|gb|ADU62214.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
          Length = 658

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 37/130 (28%), Gaps = 15/130 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEHPSIPIN 93
           V    H+G+A    V D L R       E   TY    TD   DKI++ A          
Sbjct: 13  VNAKPHLGHAYTTTVADSLRRFHSLMGEE---TYFLTGTDEHGDKIVQAAEAN------G 63

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN-- 149
            +        +  F      +         R T   HI  +  ++Q +   G  Y     
Sbjct: 64  QSPRDYVDAVSGLFKALLPDMNISNDDF-IRTTEPRHIKVVQSILQKVHDSGDIYFGEYG 122

Query: 150 NEIIFDTSSI 159
               F     
Sbjct: 123 GHYCFGCERF 132


>gi|224372863|ref|YP_002607235.1| valyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223588843|gb|ACM92579.1| valyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 858

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 20/165 (12%)

Query: 192 ILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
            LW  ST     WE   WG+G   W+ E       +      I   G D++F      + 
Sbjct: 449 ALWPFSTLG---WENGEWGKGE-KWNPED---LERFYPNNLLI--TGFDILFFWVARMMM 499

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
                 +     ++++H    +  G+KMSKS GN I   E++E        + A  +R  
Sbjct: 500 MGTHFLKDVPFRDVYLHALVRDEHGQKMSKSKGNVIDPLEMIE-------KYSADALRFT 552

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L E+    +K    +    +       
Sbjct: 553 LAILAVQGR-DIKLSEAKLIESRNFTNKLYNAARFLKMHQEKFED 596


>gi|170059338|ref|XP_001865320.1| isoleucyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167878148|gb|EDS41531.1| isoleucyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 851

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +++H   ++  G KMSKS GN I+  +++       + +    +R  +
Sbjct: 517 SVAARNTSPYRAVFVHGFAVDEHGMKMSKSLGNIISPKDIV-------KQYGCDALRWWV 569

Query: 312 LMT 314
              
Sbjct: 570 AAH 572


>gi|329116643|ref|ZP_08245360.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907048|gb|EGE53962.1| valine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 883

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTDQRPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|293376478|ref|ZP_06622707.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325842048|ref|ZP_08167585.1| valine--tRNA ligase [Turicibacter sp. HGF1]
 gi|292644900|gb|EFF62981.1| valine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|325489770|gb|EGC92126.1| valine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 878

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 53/131 (40%), Gaps = 13/131 (9%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGW-HIECSAMSSHYLGKVFDIHGGGLDL 240
            ++ PAD   W +   +   W S   W     GW  +EC    +++     D    G D+
Sbjct: 429 GEEAPADIENWNQDEDVLDTWFSSALWPFTTLGWPDVECEDFKAYF---PTDTLVTGYDI 485

Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
           IF      I QS          N+ IH    + EGRKMSKS GN +   +++E       
Sbjct: 486 IFFWVSRMIFQSLEFTDERPFKNVLIHGLVRDAEGRKMSKSLGNGVDPMDVIE------- 538

Query: 301 SWPAPVIRLAM 311
            + A  +R  +
Sbjct: 539 KYGADSLRYFL 549


>gi|251782968|ref|YP_002997271.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391598|dbj|BAH82057.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|217964190|ref|YP_002349868.1| leucyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|224499242|ref|ZP_03667591.1| leucyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|254782504|sp|B8DFR1|SYL_LISMH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|217333460|gb|ACK39254.1| leucyl-tRNA synthetase [Listeria monocytogenes HCC23]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|116074880|ref|ZP_01472141.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116068102|gb|EAU73855.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 514

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 62/334 (18%), Positives = 96/334 (28%), Gaps = 76/334 (22%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+    +  D L R  R       V ++  + +   KI   A     +    +
Sbjct: 12  VNDKPHLGSTYTTLACDALARFQRLEG--NDVVFITGVDEHGQKIQRTAADRGVTPQ--E 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHA------- 145
               IT +       D             R T   H+P +    +    +G         
Sbjct: 68  HCDAITKRYISL-WSDWGISN----DRFVRTTEERHLPLVEAFFKRCEANGDIRIGRQTG 122

Query: 146 -Y------------EANNEIIFDTSSIPNYGS-------FSRR--KIDEQKMGTR-VPEK 182
            Y            EA +           +          S    KI++       +   
Sbjct: 123 WYCVGCEEFKDEPPEAKDPYCPIHQKALEWRDEENLFFCLSNFQDKIEQLISQPDFIAPA 182

Query: 183 YHKKNPADFIL-----WKRSTPMEPGWESPWGRGRPG-----WHIECSAMSSHYL--GKV 230
             +K   +F+      +  S      W  P   G PG     W        +  L  G  
Sbjct: 183 NRRKEIQNFVAGGLRDFSISRVN-VSWGLPV-PGHPGHTFYVWFDALLGYLTALLDDGGT 240

Query: 231 FDI------------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
            D+            H  G D++  H     A    A  +   A ++ H GFL  EG+KM
Sbjct: 241 VDLDRLASVGWPAQMHVIGKDILRFHAVYWPAMLMSA-GLPVPARVFGH-GFLTREGQKM 298

Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            KS GN +    LLE             +R  +L
Sbjct: 299 GKSLGNVLDPELLLERCGT-------DAVRWYLL 325


>gi|73667420|ref|YP_303436.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|72394561|gb|AAZ68838.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 506

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+    ++ D++ R +R       V +V   TD   + +E+A QE      N 
Sbjct: 13  VNDVPHIGHVYTTLISDIIARFMRLDGYN--VKFVTG-TDEHGQKVEKAAQER-----NI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           ++   T+  +  F +    +         R T   H   +  L  ++  +   Y  +   
Sbjct: 65  SLLEFTNGTSAVFRQLADVMNYSYNDFV-RTTEMRHKKAVTALWTSLCDNDMVYLGSYSG 123

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 124 WYSVRDEAFY 133


>gi|124268230|ref|YP_001022234.1| isoleucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
 gi|124261005|gb|ABM95999.1| Isoleucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
          Length = 946

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 37/104 (35%), Gaps = 11/104 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +C  +       +  H    + +GRKMSKS GN +    + E          A +IRL 
Sbjct: 601 IACAIEGRAPYRGLLTHGFATDGQGRKMSKSLGNTVVPQSVSEKLG-------AEIIRLW 653

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
           +  T Y   ++   + L        +   T      +    DPA
Sbjct: 654 VASTDYSGDLNIDDKILARVVDAYRRIRNTLRFLLANTSDFDPA 697


>gi|323127776|gb|ADX25073.1| valyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|268323984|emb|CBH37572.1| arginyl-tRNA synthetase [uncultured archaeon]
          Length = 558

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 4/73 (5%)

Query: 36  YDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND- 94
               HIG+ R  I+ DVL R+L+    +    Y  N  D+  +I              D 
Sbjct: 119 DGPLHIGHLRNAIIGDVLARVLKRAGFDVETQYYVN--DLGRQIAVAVWGAGRMAFATDK 176

Query: 95  -AISIITSKNTQQ 106
            A   +       
Sbjct: 177 KADHAVADVYIAA 189


>gi|189083226|sp|A4VQZ0|SYL_PSEU5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 868

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 36/140 (25%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--KNVLQPMGWDAFGMPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A +         A +  T +N          L  LA       T   P      Q  
Sbjct: 87  ENAAMKNQV------APAKWTYENIAYMKAQLKSLG-LAIDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159



 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 50/131 (38%), Gaps = 26/131 (19%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    +++       ++ A   RL M+      P    ++++   +  A 
Sbjct: 626 EKMSKSKNNGVDPQAMID-------AYGADTCRLFMMFA---SPPDMSLEWSDSGVEGAS 675

Query: 332 ILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDL 381
             L    +      S G+     ++AL ++   V   +A+H   ++++       K +  
Sbjct: 676 RFLRRVWRLAHAHVSAGLPGALDVAALNDEQKAVR--RAIHLAIKQASTDVGQHHKFNTA 733

Query: 382 LPIFNASAHIL 392
           +       ++L
Sbjct: 734 IAQVMTLMNVL 744


>gi|149188165|ref|ZP_01866460.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148838153|gb|EDL55095.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 688

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 64/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L+
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLD 353

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 354 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 398

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L  +             A    + ++      A   I  + +   +
Sbjct: 399 SRNAGFITKRFEGKLSENFAEPELYNEFVAAADRIAELYEAREFGRAIREITALADKANQ 458

Query: 400 HLNKNISIAIEK 411
           ++++     + K
Sbjct: 459 YVDEKAPWVVAK 470


>gi|83319332|ref|YP_424624.1| leucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|123740039|sp|Q2SRI9|SYL_MYCCT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83283218|gb|ABC01150.1| leucyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++     L  + RKMSKS GN I  +++++T         A  +RL  M M    
Sbjct: 562 EPFQRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHG-------ADALRLYEMFMGPLD 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYND-------------LNTV 362
             + ++   L  +   L++  +          +   L  +YND              NT 
Sbjct: 615 ASLPWSFDGLDASLKWLNRCYRMINKIEFSNTNNHKLDYVYNDVVKKVTQMITELKFNT- 673

Query: 363 SAIQALHKLARESTKNH 379
            AI  L  L     K  
Sbjct: 674 -AISQLMVLVNAIYKEE 689


>gi|82703057|ref|YP_412623.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
 gi|123727136|sp|Q2Y7P0|SYM_NITMU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|82411122|gb|ABB75231.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
          Length = 728

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 26/117 (22%)

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPG + E              +H  G D+++ H     A             I+ H GFL
Sbjct: 298 RPGGNTEM-------------VHFIGKDILYFHALFWPAMLE-FSGYRTPTQIYAH-GFL 342

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            + G+KMSKS G FIT       + +  +      +R       Y   ++ +++ + 
Sbjct: 343 TVNGQKMSKSRGTFIT------AESYLKQGLNPEWLRYY-----YAAKLNDSMEDID 388


>gi|42522066|ref|NP_967446.1| hypothetical protein Bd0458 [Bdellovibrio bacteriovorus HD100]
 gi|81618454|sp|Q6MQK8|SYV_BDEBA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|39574597|emb|CAE78439.1| valS [Bdellovibrio bacteriovorus HD100]
          Length = 894

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 39/106 (36%), Gaps = 20/106 (18%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-E 318
               ++IH    + +GRKMSKS GN I   E++E          A  +R       Y  +
Sbjct: 510 PFRTVYIHGLVRDSQGRKMSKSLGNSIDPVEMIEKHG-------ADALRFTFAAHLYSGK 562

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTV 362
              F+ QRL      ++K          +  A   AL N  D    
Sbjct: 563 DFKFSEQRLEGYRNFMNK----------VWNAARFALSNLSDFKAP 598


>gi|332523554|ref|ZP_08399806.1| valine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332314818|gb|EGJ27803.1| valine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 883

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 14/148 (9%)

Query: 194 WKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           WK+   +   W S   W     GW    +     Y      +   G D+IF      I Q
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLV--TGYDIIFFWVSRMIFQ 494

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+ IH    + EGRKMSKS GN I   +++E        + A  +R  +
Sbjct: 495 SLEFTNERPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVVE-------KYGADSLRWFL 547

Query: 312 --LMTHYREPIDFTVQRLTEAEILLSKW 337
                   + + F+ +++  +   ++K 
Sbjct: 548 SNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|313665541|ref|YP_004047412.1| leucine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949602|gb|ADR24198.1| leucine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++     L  + RKMSKS GN I  +++++T         A  +RL  M M    
Sbjct: 562 EPFQRLFNQGMILGSDNRKMSKSWGNVINPDDVIDTHG-------ADALRLYEMFMGPLD 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYND-------------LNTV 362
             + ++   L  +   L++  +          +   L  +YND              NT 
Sbjct: 615 ASLPWSFDGLDASLKWLNRCYRMINKVEFSNTNNHKLDYVYNDVVKKVTQMIKELKFNT- 673

Query: 363 SAIQALHKLARESTKNH 379
            AI  L  L     K  
Sbjct: 674 -AISQLMVLVNAIYKEE 689


>gi|195576354|ref|XP_002078041.1| GD22750 [Drosophila simulans]
 gi|194190050|gb|EDX03626.1| GD22750 [Drosophila simulans]
          Length = 1163

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 649 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDENKWPKGMRVNGHLLLNSAKMSKSDGNF 706

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E ++        + A  +RL +
Sbjct: 707 LTLTEAVD-------KFSADGMRLCL 725


>gi|195342272|ref|XP_002037725.1| GM18143 [Drosophila sechellia]
 gi|194132575|gb|EDW54143.1| GM18143 [Drosophila sechellia]
          Length = 1182

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 668 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDENKWPKGMRVNGHLLLNSAKMSKSDGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E ++        + A  +RL +
Sbjct: 726 LTLTEAVD-------KFSADGMRLCL 744


>gi|167839404|ref|ZP_02466088.1| putative leucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 728

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 15/115 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R       V Y              AR+         A   +
Sbjct: 59  HMGHARNYVLADADARFRRMQGYN--VLYTTGFDTFGLPTELAARE------AGCAPERL 110

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQ----NIILHGHAYEAN 149
             + ++       RL     +   R T  H+P     +Q     +   GH +  +
Sbjct: 111 ARECSEAMAAQFVRLGLGHDSR--RITQYHVPAYYRWVQWVFLRLFEAGHCFRRD 163



 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 517 GMVKQDDRKMSKSAGNAVSLRSIVER-------YGADALRLAIIGAAAPENDVNWSDDLV 569

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 L++           +  V +A  
Sbjct: 570 RRQRAFLARLWAFVHRVVETEAGVAAAHD 598


>gi|145634394|ref|ZP_01790104.1| putative ATPase [Haemophilus influenzae PittAA]
 gi|145268374|gb|EDK08368.1| putative ATPase [Haemophilus influenzae PittAA]
          Length = 682

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   S        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|75908935|ref|YP_323231.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|75702660|gb|ABA22336.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 530

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 57/349 (16%), Positives = 101/349 (28%), Gaps = 83/349 (23%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  D + R  +    +     V  IT  D+      + +  +  +  
Sbjct: 20  VNDVPHIGSAYTTMAADAVARFQKLLGRD-----VLLITGTDEH---GQKIQRSAESLGK 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
           A      +    F+     L         R T    + I       +   G  Y+   + 
Sbjct: 72  APQEFCDEIVPSFMSLWQLLNIQY-DRFSRTTAVRHKAIVDEFFARVWQAGDIYQGQQKG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD--FILWKRSTPMEPGWES---- 206
            +  S         R  ++  +    V ++   ++  +  F L K  T +E  ++S    
Sbjct: 131 WYCVSCEEF--KEERELLEGNRCPIHVNKEVEWRDEQNYFFRLSKYQTQLEEFYKSHPDF 188

Query: 207 ----------------------------PWGRGRPG--------WHIECSAMSSHYLGKV 230
                                        WG   P         W     A  +  L   
Sbjct: 189 IQPESRRNEVLNFVSQGLQDFSISRVNLDWGFPVPTDSKHTLYVWFDALLAYVTALLDPQ 248

Query: 231 --------------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
                          ++H  G D++  H     A    A  +     ++ H GFL  +G+
Sbjct: 249 DEPTLENALAKWWPINLHLIGKDILRFHAVYWPAMLLSA-GLPLPDRVFGH-GFLTKDGQ 306

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           KM KS GN I             + + +  +R   L     + I+F   
Sbjct: 307 KMGKSLGNTI-------DPVGLVQQYGSDAVRYYFL-----KEIEFGKD 343


>gi|55980130|ref|YP_143427.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|55771543|dbj|BAD69984.1| leucyl-tRNA synthetase [Thermus thermophilus HB8]
          Length = 878

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 45/165 (27%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ +   + DVL R  R    E  V +              A      +  
Sbjct: 42  PYPSGDLHMGHLKNYTMGDVLARFRRMQGYE--VLHPMGWDAFGLPAENAA------LKF 93

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T +N +Q  +    +  L        T   P+     Q     +   G AY A
Sbjct: 94  GVHPKDWTYENIRQAKESLRLMGILY-DWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRA 152

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              ++            +  ++ E +          K+    + L
Sbjct: 153 KG-LVNWCPKCQT--VLANEQVVEGRCWRHEDTPVEKRELEQWYL 194


>gi|89070286|ref|ZP_01157605.1| isoleucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89044125|gb|EAR50286.1| isoleucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 969

 Score = 41.4 bits (96), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C         N+      L+ +G KMSKS GN +  ++++       + + A ++RL 
Sbjct: 623 QACGTIGRAPYRNVVTAGFTLDAKGNKMSKSLGNTVAPDDVI-------KQYGADILRLW 675

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    Y        + L        +   T
Sbjct: 676 VAQVDYTADQRIGPEILKGVADSYRRLRNT 705


>gi|284163384|ref|YP_003401663.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284013039|gb|ADB58990.1| isoleucyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 1068

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 66/189 (34%), Gaps = 23/189 (12%)

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           ++  S  A        + +H   L  +GR MSKS    I  +E ++            V+
Sbjct: 576 QLGMSTAALGESPYQEVLMHGHALMPDGRAMSKSKDILIDPHEAIDRHGR-------DVM 628

Query: 308 RLAMLMTHYR-EPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLN 360
           R+ +L  + + E + F    +   E  L       ++P         DP   +    D++
Sbjct: 629 RMFLLSNNPQGEDMRFDWDGMQTMENHLRTLWNVFRFPLPYMRLDEFDPTATT--LEDVD 686

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
           +   +     LAR  +   ++   F               L+  I   +E + +  +  +
Sbjct: 687 SDLELIDEWVLARLQSTKAEMTEAFED-------RRQDRALDALIEFVVEDVSRFYVQAV 739

Query: 421 KMKKFSSAD 429
           + + ++  D
Sbjct: 740 RERMWAEED 748


>gi|260581747|ref|ZP_05849544.1| leucyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260095340|gb|EEW79231.1| leucyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 861

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKAPLDSEQDRAVMA 751


>gi|257873265|ref|ZP_05652918.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
 gi|257807429|gb|EEV36251.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC10]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++         + A  +RL  M M      I +    L  +   L + W    
Sbjct: 583 NVVNPDDVIN-------QYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
              G +   + +      N     +  H+  ++ T++ + L    A + ++         
Sbjct: 636 DENGKMRDRITT-----FNDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMVFVNEAYKA 690

Query: 402 NKNISIAIEKLVQ 414
           +      +E  VQ
Sbjct: 691 DALPYEYVEGFVQ 703



 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 43/145 (29%), Gaps = 19/145 (13%)

Query: 14  KITEFQAID-PSNIRMYVCGPTVYDFA---HIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           K  EF   D P   + Y      Y      H+G+       D+L R  R       V + 
Sbjct: 18  KKNEFNTHDEPDKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYN--VLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQPRATNH 128
                      + A      +   +  +  T KN + F +    L        +   T+ 
Sbjct: 76  MGWDAFGLPAEQYA------LDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTD- 128

Query: 129 IPQMIYLIQ----NIILHGHAYEAN 149
            P+     Q     +   G AYEA 
Sbjct: 129 -PEYYKWTQWIFTKLYEKGLAYEAE 152


>gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
 gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
          Length = 650

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 39/120 (32%), Gaps = 11/120 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG++   +  D + R  R    +     V  +T  D+      + E  +         
Sbjct: 19  AHIGHSYCTVATDAIARYKRMQGYD-----VMFLTGTDEH---GQKIELNAAKAGVTPKE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +    F +    L         R T+  H+  +  + + +   G  Y+   E  + T
Sbjct: 71  YVDEIVAGFQELWKLLNISN-DRFIRTTDDYHVKAVQKIFKELYDRGEIYKGKYEGWYCT 129


>gi|145641886|ref|ZP_01797460.1| leucyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|145273365|gb|EDK13237.1| leucyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
          Length = 861

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDLTALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKAPLDSEQDRAVMA 751


>gi|145636862|ref|ZP_01792527.1| putative ATPase [Haemophilus influenzae PittHH]
 gi|145269943|gb|EDK09881.1| putative ATPase [Haemophilus influenzae PittHH]
          Length = 682

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   S        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|139473421|ref|YP_001128137.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134271668|emb|CAM29901.1| valyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|94988916|ref|YP_597017.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992808|ref|YP_600907.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542424|gb|ABF32473.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546316|gb|ABF36363.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|28574733|ref|NP_787968.1| CG33123 [Drosophila melanogaster]
 gi|22945284|gb|AAF51096.2| CG33123 [Drosophila melanogaster]
          Length = 1182

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 668 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDENKWPKGMRVNGHLLLNSAKMSKSDGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E ++        + A  +RL +
Sbjct: 726 LTLTEAVD-------KFSADGMRLCL 744


>gi|314936645|ref|ZP_07843992.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313655264|gb|EFS19009.1| isoleucine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 916

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D++ R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   +D  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  N++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPNQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQT 340
           L +   +  K   T
Sbjct: 638 LKQTSDVYRKIRNT 651


>gi|313623483|gb|EFR93684.1| leucyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I +    L  A   L + W    + +G +   V +    D NT +  +A H + +  
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVSEEGTLAEKVTT----DANT-NLEKAYHHMVKTV 663

Query: 376 TKNHD 380
           T +++
Sbjct: 664 TNHYE 668


>gi|312864585|ref|ZP_07724816.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
 gi|311099712|gb|EFQ57925.1| isoleucine--tRNA ligase [Streptococcus downei F0415]
          Length = 935

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 41/132 (31%), Gaps = 12/132 (9%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--R 84
           GP  Y     H+G+A   I  D++ R                   +  I+  + ++   R
Sbjct: 59  GP-PYANGNIHVGHALNKISKDIIIRSKSMMGYRAPYNPGWDTHGLP-IEQVLAKKGVKR 116

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           +E P     +           +  +D  RL   A    P  T   ++    I +   +  
Sbjct: 117 KEIPRADYLEMCKEYALSQVDKQREDFKRLGVSADWENPYVTLTHDYEAAQIRVFGAMAD 176

Query: 142 HGHAYEANNEII 153
            G+ Y     + 
Sbjct: 177 KGYIYRGAKPVY 188



 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 80/208 (38%), Gaps = 25/208 (12%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S   +       +      L+ +G KMSKS GN I
Sbjct: 549 LGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAVLSQGFVLDGKGEKMSKSKGNII 608

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------ 340
           + N++        + + A ++RL +        +  +++ L +      K   T      
Sbjct: 609 SPNDV-------AKQYGAEILRLWVASVDTDNDVRVSMEILGQVSESYRKIRNTLRFLLA 661

Query: 341 STSKGIIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHD---LLPIFNASAHILGIE 395
           +TS    + AV    Y DL +V    +   ++L    TK ++    + ++ A  + L ++
Sbjct: 662 NTSDFKKEQAVA---YEDLRSVDQYMMVKFNQLVATITKAYENYRFMDVYKAVNNFLTVD 718

Query: 396 VCKEHLNKNISIA-IEKLVQERLILLKM 422
           +   +L+    +  IE       +  + 
Sbjct: 719 LSAFYLDFAKDVVYIEA---ADNLARRQ 743


>gi|292488556|ref|YP_003531440.1| arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292899728|ref|YP_003539097.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291199576|emb|CBJ46693.1| arginyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553987|emb|CBA21032.1| Arginyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|312172701|emb|CBX80957.1| Arginyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 576

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 39/119 (32%), Gaps = 4/119 (3%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           L         ++P  + +    P V    H+G+ R  I+ D   R L +      V    
Sbjct: 100 LTAPKLGVSPVEPETVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLG--HKVIRAN 157

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           ++ D   +        +     N+    I   + + F ++  R     P    RA  ++
Sbjct: 158 HVGDWGTQFG--MLIAYLEKQQNEHHEAIALADLEAFYREAKRTYDEDPAFAARARGYV 214


>gi|228475068|ref|ZP_04059796.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
 gi|228271053|gb|EEK12441.1| isoleucine-tRNA ligase [Staphylococcus hominis SK119]
          Length = 916

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D++ R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDIIVRYKTMQGFYSPYVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   +D  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALEQVELQKQDFKRLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  N++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPNQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQT 340
           L +   +  K   T
Sbjct: 638 LKQTSDVYRKIRNT 651


>gi|256384330|gb|ACU78900.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256385163|gb|ACU79732.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455562|gb|ADH21797.1| methionine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 509

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 18/137 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+A    + D+L R  +    E        +T  D+      + E+ +   N      
Sbjct: 19  HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEH---GQKIENKAKEANLTPLEY 70

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII----LHGHAYEANNEIIFD 155
            +   Q F    T+L         R T+        +Q I       G+ Y+   E I+ 
Sbjct: 71  LNPKVQAFKDLWTKLNINY-DKFIRTTD--DYHEKAVQKIFTILLEKGYIYKGQYEGIYC 127

Query: 156 TSSIPNYGSFSRRKIDE 172
            S        +  +IDE
Sbjct: 128 VSCEE---FLTNEQIDE 141


>gi|116072087|ref|ZP_01469355.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
 gi|116065710|gb|EAU71468.1| isoleucyl-tRNA synthetase [Synechococcus sp. BL107]
          Length = 973

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++   K   +   + A V+RL
Sbjct: 600 SVAVNGHAPYQRVLTHGFALDEKGRKMSKSLGNVVDPMVIIAGGKNQKQDPPYGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 660 WVSSVDYSADVPIGAGILRQLADVYRKVRNTSR 692


>gi|71894327|ref|YP_278435.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
 gi|71851115|gb|AAZ43724.1| leucyl-tRNA synthetase [Mycoplasma synoviae 53]
          Length = 765

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 8/75 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +   +++E        + A   RL +L  T   + ++++ 
Sbjct: 522 LTQGMVLKDGFKMSKSKGNVVAPTDMIE-------KYGADATRLFILFATTPSKELEWSD 574

Query: 325 QRLTEAEILLSKWPQ 339
             L      L++   
Sbjct: 575 LGLIGCFKFLTRLTD 589


>gi|223933830|ref|ZP_03625798.1| leucyl-tRNA synthetase [Streptococcus suis 89/1591]
 gi|223897513|gb|EEF63906.1| leucyl-tRNA synthetase [Streptococcus suis 89/1591]
          Length = 833

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 44/122 (36%), Gaps = 25/122 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVE-------QFGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSK-------GIID-------PAVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  T+K       G +D         V   + +   NT  AI  L      + K  
Sbjct: 662 DRVYRLITTKEISSENSGALDKVYNETVKTVTEHIEDLKFNT--AIAQLMIFVNAANKED 719

Query: 380 DL 381
            L
Sbjct: 720 KL 721


>gi|325989668|ref|YP_004249367.1| isoleucyl-tRNA synthetase [Mycoplasma suis KI3806]
 gi|323574753|emb|CBZ40409.1| Isoleucyl-tRNA synthetase [Mycoplasma suis]
          Length = 911

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 ++  H   L+ +G KMSKS GN I   E++         + A + RL +  ++Y
Sbjct: 574 GKLPFKSLVAHGFVLDEKGHKMSKSKGNVIDPLEMVS-------KYGADIFRLWIGNSNY 626

Query: 317 REPIDFTVQRLTEAEILLSKWPQ 339
            + + F+  ++   ++   K   
Sbjct: 627 LKDMKFSESQMNSVQLQYRKIRN 649


>gi|325973225|ref|YP_004250289.1| isoleucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
 gi|323651827|gb|ADX97909.1| isoleucyl-tRNA synthetase [Mycoplasma suis str. Illinois]
          Length = 912

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 ++  H   L+ +G KMSKS GN I   E++         + A + RL +  ++Y
Sbjct: 574 GKLPFKSLVAHGFVLDEKGHKMSKSKGNVIDPLEMVS-------KYGADIFRLWIGNSNY 626

Query: 317 REPIDFTVQRLTEAEILLSKWPQ 339
            + + F+  ++   ++   K   
Sbjct: 627 LKDMKFSESQMNSVQLQYRKIRN 649


>gi|291279575|ref|YP_003496410.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
 gi|290754277|dbj|BAI80654.1| isoleucyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
          Length = 933

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
               LG   D++  G D       + + +S           +  H   ++ +G KMSKS 
Sbjct: 556 VRKELGWPADMYLEGSDQHRGWFHSSLLESVGTRGRAPYKEVLTHGFVVDGKGLKMSKSL 615

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           GN IT +E+++        + A ++RL +    Y E +  +   +        K   T
Sbjct: 616 GNVITPDEIID-------KYGAEILRLWVAAEDYTEDVRISNDIIKRLVESYRKIRNT 666


>gi|229845332|ref|ZP_04465464.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
 gi|229811785|gb|EEP47482.1| methionyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
          Length = 682

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   S        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|227498613|ref|ZP_03928757.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904069|gb|EEH89987.1| leucyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 830

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++  E++         + A   RL ++      
Sbjct: 567 EPFTNL-LTQGMVIKDGAKMSKSLGNVVSPEEIIG-------KYGADTARLFIMFAAPVE 618

Query: 318 EPIDFTVQRLTEAEILLSK 336
             ++++ Q +  +   L++
Sbjct: 619 RELEWSDQGVEGSFRFLNR 637


>gi|169830260|ref|YP_001716242.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637104|gb|ACA58610.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 64/187 (34%), Gaps = 49/187 (26%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+H  G D++  H          A          + +G+L LE  KMSKS GN +   
Sbjct: 254 PVDVHLVGKDIVRFHCIIWPIILMAA--GIPLPKRVVGHGWLMLESGKMSKSKGNVVDPF 311

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPID-----FTVQRL---------TEAEILLS 335
            L++        +    IR  +L    RE +      ++   L          +   LLS
Sbjct: 312 VLIDR-------YGVDAIRYYLL----REMLFGADGYYSEDNLIRRINVDLANDLGNLLS 360

Query: 336 K----------------------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           +                        +      +I P  ++ L N+L+  +A+ A+ KL  
Sbjct: 361 RTTAMIDKYLDGEIQAPGPADDPLDRELIDLALITPGEVAGLVNELDLSAALGAIMKLVG 420

Query: 374 ESTKNHD 380
            + K  +
Sbjct: 421 RANKYIE 427


>gi|51473278|ref|YP_067035.1| arginyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81390280|sp|Q68XT9|SYR_RICTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|51459590|gb|AAU03553.1| Arginine translase [Rickettsia typhi str. Wilmington]
          Length = 576

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 4/49 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           PT     HIG+AR  +  DVL R+L+         Y  N  D   +I +
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVN--DAGSQIND 172


>gi|16330137|ref|NP_440865.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
 gi|2501011|sp|P73505|SYI_SYNY3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1652625|dbj|BAA17545.1| isoleucyl-tRNA synthetase [Synechocystis sp. PCC 6803]
          Length = 988

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 38/93 (40%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   + I     +  H   L+ +G KMSKS GN +   +++   K   +   + A V+RL
Sbjct: 586 SVAVNGIAPYKTVLTHGFVLDEKGHKMSKSLGNVVDPYQIINGGKNQKQEPAYGADVLRL 645

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   + +K   T+ 
Sbjct: 646 WVASVDYANDVPIGQGILKQLVDIRNKIRNTAR 678


>gi|47097505|ref|ZP_00235046.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|293596567|ref|ZP_05262346.2| leucyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|47014120|gb|EAL05112.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|293590315|gb|EFF98649.1| leucyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 841

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 594 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 646

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 647 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 682


>gi|325474735|gb|EGC77921.1| lysyl-tRNA synthetase [Treponema denticola F0402]
          Length = 528

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 24 SNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           ++ +Y C  G T     H+GN R +I  D++ R LR         Y  +  D+
Sbjct: 23 GDLDVYTCASGITPSGTVHVGNFREIISVDLVVRALRSRGKNVRFIYSWDDYDV 76


>gi|284048004|ref|YP_003398343.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952225|gb|ADB47028.1| leucyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 43/114 (37%), Gaps = 15/114 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H                    E   N+ +  G +  +G KMSKS G
Sbjct: 532 PVDQYIGGIEHAILHLLYSRFFMKVLHDAGLVKADEPFTNL-LTQGMVIKDGAKMSKSLG 590

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK 336
           N ++  E++         + A   RL ++        ++++ Q +  +   L++
Sbjct: 591 NVVSPEEIVG-------KFGADTARLFIMFAAPVERELEWSDQGVEGSFRFLNR 637


>gi|257877008|ref|ZP_05656661.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811174|gb|EEV39994.1| leucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++         + A  +RL  M M      I +    L  +   L + W    
Sbjct: 583 NVVNPDDVIN-------QYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
              G +   + +      N     +  H+  ++ T++ + L    A + ++         
Sbjct: 636 DENGKMRDRITT-----FNDGKLSKVYHQTVKKVTEDFEQLHFNTAISQLMVFVNEAYKA 690

Query: 402 NKNISIAIEKLVQ 414
           +      +E  VQ
Sbjct: 691 DALPYEYVEGFVQ 703



 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 43/145 (29%), Gaps = 19/145 (13%)

Query: 14  KITEFQAID-PSNIRMYVCGPTVYDFA---HIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           K  EF   D P   + Y      Y      H+G+       D+L R  R       V + 
Sbjct: 18  KKNEFNTHDEPDKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYN--VLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQPRATNH 128
                      + A      +   +  +  T KN + F +    L        +   T+ 
Sbjct: 76  MGWDAFGLPAEQYA------LDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTD- 128

Query: 129 IPQMIYLIQ----NIILHGHAYEAN 149
            P+     Q     +   G AYEA 
Sbjct: 129 -PEYYKWTQWIFTKLYEKGLAYEAE 152


>gi|254469852|ref|ZP_05083257.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961687|gb|EEA96882.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 517

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 15/128 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  DVL R  R    E         TD+  +     +    ++    + S 
Sbjct: 20  PHIGHAYEAIATDVLARFQRLDGREVHFL---TGTDVHGQ-----KMLQTAVKEGMSPSD 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
           +  KN++ F +    L C         + R       +    Q +   G  Y+ +    +
Sbjct: 72  LADKNSKLFREMVEMLGCSNDDFIQTNEERHYKSCQAIW---QKMADAGDIYKDSYAGWY 128

Query: 155 DTSSIPNY 162
                  Y
Sbjct: 129 SVRDEAYY 136



 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 8/50 (16%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            ++ H GFL   G KMSKS GN I   +L+ET       +    IR   L
Sbjct: 288 RVFAH-GFLFNSGEKMSKSLGNVIAPRDLVET-------YGLDQIRYFFL 329


>gi|91205126|ref|YP_537481.1| leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|122990937|sp|Q1RJS2|SYL_RICBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|91068670|gb|ABE04392.1| Leucyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 831

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 53/135 (39%), Gaps = 21/135 (15%)

Query: 263 NIWIH--NGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYR 317
           N + H  NG L  +G   KMSKS  N I +  +        + + A  IR  +L  +   
Sbjct: 582 NEFFHKENGGLVTQGRIEKMSKSKKNLIDLETM-------QQQYGADAIRFFVLSDSPPE 634

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ-ALHKLAREST 376
           + ++++   +  +   ++K  Q            +  L ++ NT   ++  +H   +   
Sbjct: 635 KDLEWSASGIEGSARFINKLEQM--------QETIIKLSDNKNTNKELKRLIHFTIKHVA 686

Query: 377 KNHDLLPIFNASAHI 391
           ++     +  A A +
Sbjct: 687 EDIKHFALNRAIARM 701


>gi|46907891|ref|YP_014280.1| leucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|226224263|ref|YP_002758370.1| leucyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|60390717|sp|Q71Z07|SYL_LISMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|259511547|sp|C1KVV9|SYL_LISMC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46881160|gb|AAT04457.1| leucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|225876725|emb|CAS05434.1| leucyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
 gi|328474001|gb|EGF44814.1| leucyl-tRNA synthetase [Listeria monocytogenes 220]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|16803700|ref|NP_465185.1| leucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224503674|ref|ZP_03671981.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254898173|ref|ZP_05258097.1| leucyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|29336552|sp|Q8Y6M4|SYL_LISMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16411096|emb|CAC99738.1| leucyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|332234871|ref|XP_003266627.1| PREDICTED: leucyl-tRNA synthetase, cytoplasmic isoform 3 [Nomascus
           leucogenys]
          Length = 1149

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 13/89 (14%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 637 FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 694

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAM 311
           GNF+T+ + ++        + A  +RLA+
Sbjct: 695 GNFLTLTQAID-------KFSADGMRLAL 716


>gi|315633887|ref|ZP_07889176.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393]
 gi|315477137|gb|EFU67880.1| methionyl-tRNA synthetase [Aggregatibacter segnis ATCC 33393]
          Length = 686

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 22/135 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K +NI++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIMYFHSLFWPAMLEGA-GFRKPSNIFVH-GYVTVNGEKMSKSRGTFIQAATYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +      +R      L    R + +D  ++   +      ++K     S + G 
Sbjct: 348 ------KHLDPECLRYYYAAKLSN--RIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGF 399

Query: 347 IDPAV----LSALYN 357
           I         +AL +
Sbjct: 400 IQKRFDGKLAAALDD 414


>gi|71903958|ref|YP_280761.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|90108441|sp|Q48SA4|SYV_STRPM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|71803053|gb|AAX72406.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|13470650|ref|NP_102219.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
 gi|25009388|sp|Q98MV8|SYM_RHILO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|14021392|dbj|BAB48005.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 39/117 (33%), Gaps = 14/117 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D L R  R    +        +T  D+  ++    +  +         
Sbjct: 19  PHIGHAYTVIATDALARFQRLDGKDVFF-----LTGTDEHGLK---MQQTAEKEGITPQA 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           +  +N+  F   T  +         R T   P+     Q I     A  AN +I  D
Sbjct: 71  LADRNSAIFRSMTEAVGGSN-DEYIRTTE--PRHYASCQAIWK---AMAANGDIYLD 121



 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 51/157 (32%), Gaps = 49/157 (31%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM--- 313
            IE    ++ H GFL   G KMSKS GN +    L+E        +    +R   L    
Sbjct: 280 GIELPKRVFAH-GFLFNRGEKMSKSVGNVVDPFALIE-------HYGLDQVRYFFLREVP 331

Query: 314 ----THYREP--IDFTVQRLTE-----AEILLS------------KWPQTSTSKGIIDPA 350
                 Y     ++ T   L       A+  LS            +   T     I+D A
Sbjct: 332 FGQDGSYSHDAIVNRTNADLANGLGNLAQRSLSMIAKNCGGVVPKRGEMTDADSAILDQA 391

Query: 351 VLSALYNDLNTVS----------AIQALHKLARESTK 377
           V +     L T            A+ A+  +  E+ +
Sbjct: 392 VAA-----LTTARKAMAGQGIHLALAAIFDVVAEADR 423


>gi|145638258|ref|ZP_01793868.1| leucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|145272587|gb|EDK12494.1| leucyl-tRNA synthetase [Haemophilus influenzae PittII]
 gi|309751412|gb|ADO81396.1| Leucyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 861

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDITALSAEQKVLRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLESDQDRAVMA 751


>gi|297293890|ref|XP_001119014.2| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like, partial
           [Macaca mulatta]
          Length = 198

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 54/163 (33%), Gaps = 49/163 (30%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                D+   G DL+  H      N +A          TA     NG L L   KMSKS 
Sbjct: 64  FWYPVDLRVSGKDLVPNHLSYYLYNHVAMWPEQSDKWPTAVR--ANGHLLLNSEKMSKST 121

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GNF+T+ + ++        + A  +RL                 L +A   +        
Sbjct: 122 GNFLTLTQAID-------KFSADGMRL----------------ALADAGDTVE------- 151

Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALH---KLARESTKNHDLL 382
                D   + A+ +     + I  L+   +  +E   N D L
Sbjct: 152 -----DANFVEAMAD-----AGILRLYTWVEWVKEMVANWDSL 184


>gi|294787920|ref|ZP_06753164.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294484213|gb|EFG31896.1| methionine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 683

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 71/185 (38%), Gaps = 17/185 (9%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             I+ H GFL ++G+KMSKS G FIT    L+
Sbjct: 295 HFIGKDILYFHALFWTAMLE-YSGHRAPNGIFAH-GFLTVDGQKMSKSRGTFITAKSYLD 352

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK------WPQTSTSKGII 347
                        +R  +        I+     L +    ++           S + G I
Sbjct: 353 L------GLNPEWLRYYI-AAKLNSKIEDIDLNLNDFIARINSDLIGKYINIASRAAGFI 405

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNIS 406
                 +L  D++  + I+ L + +    ++++      A   I+G+ ++  E+++ N  
Sbjct: 406 HKKFSGSLK-DVSQSTLIKQLTEQSESIAQDYESREYNKALREIMGLADLVNEYVDANKP 464

Query: 407 IAIEK 411
             + K
Sbjct: 465 WELAK 469


>gi|294789076|ref|ZP_06754315.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
 gi|294482817|gb|EFG30505.1| isoleucine--tRNA ligase [Simonsiella muelleri ATCC 29453]
          Length = 927

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 37/108 (34%), Gaps = 15/108 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++  GRKMSKS GN +   E+          + A ++RL   
Sbjct: 579 CATLGRAPYKQLLTHGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAA 631

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            T Y   +  + + L     +  +   T +         L A   D N
Sbjct: 632 NTDYSGELAISKEILKRVTEIYRRIRNTLS--------FLFANLKDFN 671


>gi|255522165|ref|ZP_05389402.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|241895883|ref|ZP_04783179.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241870926|gb|EER74677.1| leucyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 66/164 (40%), Gaps = 16/164 (9%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    +      L     KMSKS GN +  ++++E        + A  +RL  M 
Sbjct: 554 VVHTKEPFQRLANQGMILGENHEKMSKSKGNVVNPDDVVE-------EYGADTLRLYEMF 606

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           M    + I ++ + L  +   L + W         +   + +   + L+     +  ++ 
Sbjct: 607 MGPLDQSIAWSEEGLAGSRRWLERVWRLFIDDDDKLRDHITTINDHKLD-----KIYNET 661

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQ 414
            ++ T++++ L    A + ++ I V + +   ++S+  +E  ++
Sbjct: 662 VKKVTEDYENLRFNTAISQMM-IFVNEAYKQDSLSVQYVEGFIK 704


>gi|257063479|ref|YP_003143151.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791132|gb|ACV21802.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 526

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 59/182 (32%), Gaps = 55/182 (30%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+   H     A    A  +  T  ++ H GFL + G KMSKS GN I   +L+ 
Sbjct: 264 HFVGKDITRFHCVIWPAMLMAA-GLPVTGTVFGH-GFLLVGGEKMSKSKGNGIKPADLV- 320

Query: 294 TKKFGGRSWPAPVIRLAMLM----TH------------YREPIDFTVQR----------- 326
                 + + +   R   +      H            Y   +  T              
Sbjct: 321 ------KVYGSDAYRYYFMSDVRFGHDGNISIERMTQVYNADLANTWGNLCSRVFNMVGK 374

Query: 327 ------------LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
                       L +AE  L    +   +K  +DP +       +N   A+ A+ +LA  
Sbjct: 375 YFDGKVPEVPAELKDAENPLRTIAEGLYAK--VDPCMAE-----VNFTDAVAAIQELAGA 427

Query: 375 ST 376
           + 
Sbjct: 428 AN 429



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/144 (13%), Positives = 40/144 (27%), Gaps = 15/144 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I  D + R  R    +     V  +T +D+   + A     +     
Sbjct: 15  VNAAPHLGTAYTTIAADTVARYQRMNGYD-----VAFVTGLDEHGQKIAETAEKN---GT 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANN 150
                       F +    L          ++    +    +Q         G+ Y++  
Sbjct: 67  TPQAWCDSMVPAFDEAWDMLDITYTDFVRTSS---DRQTRTVQKFWNDIYEKGYLYKSAY 123

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQK 174
           E  +       Y      K ++ +
Sbjct: 124 EGWYCVHEETYYAESDLEKNEDGE 147


>gi|224540962|ref|ZP_03681501.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
 gi|224526113|gb|EEF95218.1| hypothetical protein CATMIT_00113 [Catenibacterium mitsuokai DSM
           15897]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           M   Y     D    G D+IF      + QS          N+ IH    + +GRKMSKS
Sbjct: 468 MFKRYF--PTDTLVTGYDIIFFWVSRMMFQSIEFTGRRPFKNVLIHGLIRDEQGRKMSKS 525

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAML 312
            GN +   ++++        + A  +R  +L
Sbjct: 526 LGNGVDPMDVID-------EYGADSLRWFLL 549


>gi|156552587|ref|XP_001599981.1| PREDICTED: similar to leucyl-tRNA synthetase [Nasonia vitripennis]
          Length = 2080

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 230  VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
              D+   G DL+  H    I         +          NG L L   KMSKS GNF+T
Sbjct: 1554 PVDLRVSGKDLVQNHLTYFIYNHTAVWPKQPELWPRGIRANGHLLLNSAKMSKSEGNFLT 1613

Query: 288  INELLETKKFGGRSWPAPVIRLAM 311
            ++E +       + + A   RL +
Sbjct: 1614 LSEAV-------KKYSADGTRLCL 1630


>gi|124516589|gb|EAY58097.1| Isoleucyl-tRNA synthetase [Leptospirillum rubarum]
          Length = 976

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +GRKMSKS  N I+  E++         + A ++RL  
Sbjct: 590 SMALFDTPPYRQVLTHGFVVDGQGRKMSKSLKNVISPLEIIN-------KYGAEILRLWA 642

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y+E I  +   L++      K   T
Sbjct: 643 ASSDYQEDIRLSELILSQLVESYRKIRNT 671


>gi|73985819|ref|XP_533856.2| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           isoform 1 [Canis familiaris]
          Length = 903

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ +I  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAIERNLHPESWTQSNIEHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|70732626|ref|YP_262389.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|84029559|sp|Q4K5U4|SYI_PSEF5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|68346925|gb|AAY94531.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 943

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++ +T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDENGRKMSKSLGNVIAPQKVNDTLG-------ADIMRLWVS 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   +  + Q L  +     +   T+ 
Sbjct: 637 ATDYSGEMAVSDQILQRSADAYRRIRNTAR 666


>gi|332312102|gb|EGJ25197.1| Leucyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|328956891|ref|YP_004374277.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
 gi|328673215|gb|AEB29261.1| leucine--tRNA ligase [Carnobacterium sp. 17-4]
          Length = 816

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 58/194 (29%), Gaps = 42/194 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 534 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGNNEKMSKSKG 593

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++E        + A  +R+  M M      I ++   L  +   L + W    
Sbjct: 594 NVVNPDDVVE-------KFGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLDRVWRLIM 646

Query: 342 TSKGIIDPAVLSALYND----------------------LNTVSAIQALHKLARESTKNH 379
              G +   +    +ND                       NT  AI  +     E+ K  
Sbjct: 647 DENGKVRDRITK--FNDGSLDVVYHQTVKKVTEDFEHLRFNT--AISQMMVFVNEAYKAT 702

Query: 380 DL-LPIFNASAHIL 392
            L +    A   +L
Sbjct: 703 ALPVDYIKAFVQLL 716


>gi|327310520|ref|YP_004337417.1| isoleucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
 gi|326946999|gb|AEA12105.1| isoleucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
          Length = 959

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 46/125 (36%), Gaps = 23/125 (18%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          +I I    L+ EG+KMSKS GN +   +LL         + A   R
Sbjct: 551 LATSMVYTGRAPYKSILITGHILDKEGQKMSKSKGNVVWAKDLLS-------KYGADPTR 603

Query: 309 LAMLM--THYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVL-------S 353
           L +L     + E ++F    +  A   L+      K+  T  S    DP           
Sbjct: 604 LYLLTKAAPW-EALNFDPDEIKYAVSQLNILWNVVKFADTYMSLDGFDPRRHRLEELLGK 662

Query: 354 ALYND 358
           AL  D
Sbjct: 663 ALDED 667


>gi|304386413|ref|ZP_07368746.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
 gi|304327770|gb|EFL94997.1| methionine--tRNA ligase [Pediococcus acidilactici DSM 20284]
          Length = 675

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 40/158 (25%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +E    I+ H G+L ++  KMSKS GN I    ++E        +    +R  +L  
Sbjct: 289 ALGLEMPKQIYGH-GWLLMKDDKMSKSKGNVIYPETIVE-------KYGLDALRYYLLKA 340

Query: 315 -HYREPIDFTVQ----------------RLTEAEILLSKWP-------QTSTSKGIIDPA 350
             Y    +FT +                 L     +++K+        Q+  ++   D  
Sbjct: 341 MPYSNDGNFTPEDFVSKINFDLANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLE 400

Query: 351 VLSA--------LYNDLNTVSAIQALHKLARESTKNHD 380
            ++A        L   ++   A+  + KL   S K  D
Sbjct: 401 KVAAETIKNYQELMESMHFSDALAEVWKLVSRSNKYID 438


>gi|281491310|ref|YP_003353290.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281375051|gb|ADA64569.1| Leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  A   L
Sbjct: 608 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIPWSEEGLEGARKFL 660

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +        + + G +D             L  +Y   NT  AI  L        K
Sbjct: 661 DRAVRMIENSEIKAENNGELDKVYNETVKNVTERLDLMY--FNT--AISQLMIFVNAVNK 716

Query: 378 NHDL 381
              L
Sbjct: 717 AKAL 720


>gi|227891066|ref|ZP_04008871.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|301300900|ref|ZP_07207072.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|227867155|gb|EEJ74576.1| valyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
 gi|300851499|gb|EFK79211.1| valine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 886

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS    +     N+ IH    + +GRKMSKS GN I   ++++  
Sbjct: 488 TGYDIIFFWVSRMIFQSVEFTKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVID-- 545

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 + A  +R  +        + + F+  ++  A   ++K    S         V+ 
Sbjct: 546 -----KYGADALRWFLSNGSAP-GQDVRFSYTKMDAAWNFINKIWNASR-------FVIM 592

Query: 354 ALYND--LNTVSA----------IQALHKLARESTKNHD 380
            L +D  L+   A          +  L+   R+ T+  D
Sbjct: 593 NLDSDVELSLPEASEWQLADKWILSRLNDTVRDVTRLFD 631


>gi|94264111|ref|ZP_01287910.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93455527|gb|EAT05717.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 949

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   ++ +G+KMSKS GN I  ++++       +   A ++RL      Y
Sbjct: 594 GAAPYKAVLTHGFVVDGQGKKMSKSVGNVIAPDKII-------KQHGAEILRLWAASEDY 646

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+ I  +   L +      K   T
Sbjct: 647 RDDIRISENILRQLADAYRKTRNT 670


>gi|90962047|ref|YP_535963.1| valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
 gi|90821241|gb|ABD99880.1| Valyl-tRNA synthetase [Lactobacillus salivarius UCC118]
          Length = 886

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 61/159 (38%), Gaps = 29/159 (18%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS    +     N+ IH    + +GRKMSKS GN I   ++++  
Sbjct: 488 TGYDIIFFWVSRMIFQSVEFTKRRPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVID-- 545

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 + A  +R  +        + + F+  ++  A   ++K    S         V+ 
Sbjct: 546 -----KYGADALRWFLSNGSAP-GQDVRFSYTKMDAAWNFINKIWNASR-------FVIM 592

Query: 354 ALYND--LNTVSA----------IQALHKLARESTKNHD 380
            L +D  L+   A          +  L+   R+ T+  D
Sbjct: 593 NLDSDVELSLPEASEWQLADKWILSRLNDTVRDVTRLFD 631


>gi|78185627|ref|YP_378061.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
 gi|78169921|gb|ABB27018.1| Isoleucyl-tRNA synthetase [Synechococcus sp. CC9902]
          Length = 973

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++   K   +   + A V+RL
Sbjct: 600 SVAVNGHAPYQRVLTHGFALDEKGRKMSKSLGNVVDPMVIIAGGKNQKQDPPYGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 660 WVSSVDYSADVPIGAGILRQLADVYRKVRNTSR 692


>gi|42528053|ref|NP_973151.1| lysyl-tRNA synthetase [Treponema denticola ATCC 35405]
 gi|41819098|gb|AAS13070.1| lysyl-tRNA synthetase [Treponema denticola ATCC 35405]
          Length = 528

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 24 SNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           ++ +Y C  G T     H+GN R +I  D++ R LR         Y  +  D+
Sbjct: 23 GDLDVYTCASGITPSGTVHVGNFREIISVDLVVRALRSRGKNVRFIYSWDDYDV 76


>gi|86136917|ref|ZP_01055495.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
 gi|85826241|gb|EAQ46438.1| leucyl-tRNA synthetase [Roseobacter sp. MED193]
          Length = 855

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 37/140 (26%), Gaps = 13/140 (9%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
             P   + YV    P      H+G+ R   + DV+ R          V +          
Sbjct: 27  RTPGKEKYYVLEMFPYPSGKLHMGHVRNYTMGDVVARY--KMSTGHNVLHPMGWDAFGMP 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
               A                T  N     +    L       +  AT   ++  Q   L
Sbjct: 85  AENAAMASGGH------PKDWTYANIAAMKEQMKPLGLSLDWSREFATCDEDYYGQQQAL 138

Query: 136 IQNIILHGHAYEANNEIIFD 155
             + +  G  Y  N  + +D
Sbjct: 139 FLDFLDKGLVYRKNAVVNWD 158


>gi|56807922|ref|ZP_00365746.1| COG0525: Valyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|325689496|gb|EGD31501.1| leucine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 861

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 637 AKMSKSLRNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 689

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +  TSK I+                     +  L    NT  AI  L      + K
Sbjct: 690 DRVYRLITSKEIVADNNGALDKVYHETVKSVTEQIEEL--KFNT--AIAQLMIFVNAANK 745

Query: 378 NHDL 381
              L
Sbjct: 746 EEKL 749


>gi|310794257|gb|EFQ29718.1| tRNA synthetase class I [Glomerella graminicola M1.001]
          Length = 545

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 15/132 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+   MI+ DVL R        +         +   K+ + A ++        
Sbjct: 20  VNASPHIGHMYSMILADVLKRW--QVLKGRPAILCTGTDEHGSKVQQAAARQGVEPKDFC 77

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANN 150
                    T +  +D  R   +   H  R T+  P     +Q+        G+ YEA +
Sbjct: 78  D-------TTAEKFRDLARAIGMDNDHFIRTTD--PDHKEAVQHFWHLLKGKGYIYEAKH 128

Query: 151 EIIFDTSSIPNY 162
           +  +  S    Y
Sbjct: 129 QGWYCISDECFY 140


>gi|293596213|ref|ZP_05229277.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|293593511|gb|EFG01272.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
          Length = 841

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 594 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 646

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 647 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 682


>gi|270290915|ref|ZP_06197139.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
 gi|270280975|gb|EFA26809.1| methionyl-tRNA synthetase [Pediococcus acidilactici 7_4]
          Length = 675

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 40/158 (25%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +E    I+ H G+L ++  KMSKS GN I    ++E        +    +R  +L  
Sbjct: 289 ALGLEMPKQIYGH-GWLLMKDDKMSKSKGNVIYPETIVE-------KYGLDALRYYLLKA 340

Query: 315 -HYREPIDFTVQ----------------RLTEAEILLSKWP-------QTSTSKGIIDPA 350
             Y    +FT +                 L     +++K+        Q+  ++   D  
Sbjct: 341 MPYSNDGNFTPEDFVSKINFDLANDLGNLLNRTVAMINKYEGGVIPTFQSGVNEVDADLE 400

Query: 351 VLSA--------LYNDLNTVSAIQALHKLARESTKNHD 380
            ++A        L   ++   A+  + KL   S K  D
Sbjct: 401 KVAAETIKNYQELMESMHFSDALAEVWKLVSRSNKYID 438


>gi|254832063|ref|ZP_05236718.1| leucyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|254695332|ref|ZP_05157160.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|261215703|ref|ZP_05929984.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
 gi|260917310|gb|EEX84171.1| isoleucyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
          Length = 972

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 67/189 (35%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 599 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 658

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 659 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 706

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L +L R      D   I  A    + 
Sbjct: 707 TLAHDEGENVSYA----DL--PELERLMLHRLTELDELVRSGYDTFDFKRIARALVDFMN 760

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 761 VELSAFYFD 769


>gi|228958827|ref|ZP_04120536.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228800863|gb|EEM47771.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
           str. T13001]
          Length = 517

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 32/113 (28%), Gaps = 14/113 (12%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+   M+VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNK-EMFVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIER---ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
             R +    D    +           P     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFAKYIGMPYCDVPDPYGC-HNSYAEHFEKEFEKSLQAFGIE 120


>gi|226939053|ref|YP_002794124.1| leucyl-tRNA synthetase [Laribacter hongkongensis HLHK9]
 gi|254782503|sp|C1DA02|SYL_LARHH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226713977|gb|ACO73115.1| Syl [Laribacter hongkongensis HLHK9]
          Length = 866

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 45/143 (31%), Gaps = 37/143 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    L+E        + A   RL M+      + ++++   +  A   L
Sbjct: 629 EKMSKSKNNGVDPQALIE-------QYGADTARLFMMFAAPPSQSLEWSDAGVEGAYRFL 681

Query: 335 SKWPQTSTS--KGIIDPAVLS--------AL-----------YND------LNTVSAIQA 367
            +  +  +    G +    ++        AL            +D       NT  AI A
Sbjct: 682 KRLYKIVSEYVAGGVAERFVAGELTADEKALRLKLHTTIQKVSDDFGVRQQFNT--AIAA 739

Query: 368 LHKLARESTKNHDLLPIFNASAH 390
           + +L     +      +      
Sbjct: 740 VMELLNLFDRTEASRAVRQEVLE 762


>gi|226307854|ref|YP_002767814.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
 gi|226186971|dbj|BAH35075.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
          Length = 532

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R    E    +    TD         + +  +I    
Sbjct: 35  PNGAPHIGHAYEYISSDALARFKRLDGHE---VFFMTGTD-----EHGLKMQQTAIKEGI 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEI 152
            +  + ++N+  F      L         R T+   Q+      + +   G  Y      
Sbjct: 87  DVRELAARNSDVFQNLDKVLNISY-DRFIRTTDADHQVASKAIWEKMAASGDIYLDTYSG 145

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 146 WYSVRDEAFY 155



 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 25/145 (17%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            +++H GFL  +G KMSKS GN +    +++        +    +R  +L          
Sbjct: 309 RVFVH-GFLYNKGEKMSKSVGNVVDPIAMVD-------QYGLDAVRFFLLREISYGQDGS 360

Query: 316 Y-------REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
           Y       R   D + +    A+  L+   +   ++            +DL  +++  AL
Sbjct: 361 YSHEAIVTRMNADLSNELGNLAQRSLTMVAKNCDAQVPTPGEFTE---DDLAMLASADAL 417

Query: 369 HKLARESTKNHDLLPIFNASAHILG 393
               R       L     A   +LG
Sbjct: 418 LAKCRSEFDVQALHLALEAIWGVLG 442


>gi|194855572|ref|XP_001968574.1| GG24431 [Drosophila erecta]
 gi|190660441|gb|EDV57633.1| GG24431 [Drosophila erecta]
          Length = 1182

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 668 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDENKWPKGMRVNGHLLLNSAKMSKSDGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E ++        + A  +RL +
Sbjct: 726 LTLTEAVD-------KFSADGMRLCL 744


>gi|194759482|ref|XP_001961976.1| GF14667 [Drosophila ananassae]
 gi|190615673|gb|EDV31197.1| GF14667 [Drosophila ananassae]
          Length = 1180

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 37/150 (24%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 666 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDETKWPKGMRVNGHLLLNSAKMSKSDGNF 723

Query: 286 ITINEL-------------------LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +T+ E                    +E   F   +  A ++RL          I++  + 
Sbjct: 724 LTLTEAVDKFSADGMRLCLADAGDSVEDANFVESTADAGILRLYTF-------IEWVKEM 776

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
           L E+   L K       K   D   LS L 
Sbjct: 777 L-ESRSSLRK----GADKTFNDQVFLSELN 801


>gi|258611616|ref|ZP_05234151.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258601879|gb|EEW15204.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 841

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 594 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 646

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 647 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 682


>gi|47093772|ref|ZP_00231521.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258611712|ref|ZP_05241635.2| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293596862|ref|ZP_05264962.2| leucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|47017859|gb|EAL08643.1| leucyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|258605593|gb|EEW18201.1| leucyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583156|gb|EFF95188.1| leucyl-tRNA synthetase [Listeria monocytogenes HPB2262]
          Length = 841

 Score = 41.4 bits (96), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 594 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 646

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 647 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 682


>gi|328465026|gb|EGF36305.1| leucyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 788

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|301633478|gb|ADK87032.1| valine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 838

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 12/81 (14%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               + IH    + + RKMSKS  N I   +L+       R + A   RL +   H   P
Sbjct: 497 PFKQVLIHGLVRDAQNRKMSKSLNNGINPMDLI-------RDYGADATRLFLTSNH--TP 547

Query: 320 ID---FTVQRLTEAEILLSKW 337
            D   F  Q+L  A   L+K 
Sbjct: 548 GDDLIFNEQKLKSAANFLNKL 568


>gi|157736663|ref|YP_001489346.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|166980074|sp|A8ERV3|SYL_ARCB4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157698517|gb|ABV66677.1| leucyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 821

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  + +++        + A   RL +L      + +++  
Sbjct: 575 LTQGMVLKDGAKMSKSKGNVVDPDLIID-------KYGADTARLFILFAAPPTKELEWND 627

Query: 325 QRLTEAEILLSKWPQTSTS 343
             +  A   + K+ + + +
Sbjct: 628 SAVEGAFRFIKKFFERAEN 646


>gi|171849151|pdb|2V0C|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate In The
           Synthetic Site And An Adduct Of Amp With 5-Fluoro-1,3-
           Dihydro-1-Hydroxy-2,1-Benzoxaborole (An2690) In The
           Editing Site
          Length = 878

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 44/165 (26%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ +   + DVL R  R    E  V +              A      +  
Sbjct: 42  PYPSGDLHMGHLKNYTMGDVLARFRRMQGYE--VLHPMGWDAFGLPAENAA------LKF 93

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T  N +Q  +    +  L        T   P+     Q     +   G AY A
Sbjct: 94  GVHPKDWTYANIRQAKESLRLMGILY-DWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRA 152

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              ++            +  ++ E +          K+    + L
Sbjct: 153 KG-LVNWCPKCQT--VLANEQVVEGRCWRHEDTPVEKRELEQWYL 194


>gi|94267665|ref|ZP_01290951.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
 gi|93451903|gb|EAT02631.1| Isoleucyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
          Length = 946

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   ++ +G+KMSKS GN I  ++++       +   A ++RL      Y
Sbjct: 591 GAAPYKAVLTHGFVVDGQGKKMSKSVGNVIAPDKII-------KQHGAEILRLWAASEDY 643

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
           R+ I  +   L +      K   T
Sbjct: 644 RDDIRISENILRQLADAYRKTRNT 667


>gi|40882399|dbj|BAB68228.2| putative leucyl-tRNA synthetase [Enterococcus faecium]
          Length = 204

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 57/143 (39%), Gaps = 14/143 (9%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEI 332
              KMSKS GN +  ++++ET       + A  +R+  M M      I ++   L  +  
Sbjct: 2   NNEKMSKSRGNVVNPDDVVET-------YGADTLRMYEMFMGPLDASIAWSENGLEGSRK 54

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            L +  +    +       ++ L +  L+     +  H+  ++ T++++ L    A + +
Sbjct: 55  FLDRVWRLIVDENNKMRDRITTLNDGKLD-----KVYHQTVKKVTEDYENLHFNTAISQL 109

Query: 392 LGIEVCKEHLNKNISIAIEKLVQ 414
           +        ++      IE  VQ
Sbjct: 110 MVFINEAYKVDALPYEYIEGFVQ 132


>gi|15615843|ref|NP_244147.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|14285778|sp|Q9K7S8|SYL_BACHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10175904|dbj|BAB07000.1| leucyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 806

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 41/127 (32%), Gaps = 14/127 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++++         A  +RL  M M      I ++   L  A   L +  +   
Sbjct: 583 NVVNPDDIIDSHG-------ADTLRLYEMFMGPLDASIAWSTTGLDGARRFLDRVWRLLV 635

Query: 343 SKGIIDP 349
            +   + 
Sbjct: 636 DENTEEK 642


>gi|13508219|ref|NP_110168.1| valyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501066|sp|P75304|SYV_MYCPN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|1674039|gb|AAB96009.1| valyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 838

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 33/81 (40%), Gaps = 12/81 (14%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               + IH    + + RKMSKS  N I   +L+       R + A   RL +   H   P
Sbjct: 497 PFKQVLIHGLVRDAQNRKMSKSLNNGINPMDLI-------RDYGADATRLFLTSNH--TP 547

Query: 320 ID---FTVQRLTEAEILLSKW 337
            D   F  Q+L  A   L+K 
Sbjct: 548 GDDLIFNEQKLKSAANFLNKL 568


>gi|315635829|ref|ZP_07891091.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315479808|gb|EFU70479.1| leucine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 821

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  + +++        + A   RL +L      + +++  
Sbjct: 575 LTQGMVLKDGAKMSKSKGNVVDPDLIID-------KYGADTARLFILFAAPPTKELEWND 627

Query: 325 QRLTEAEILLSKWPQTSTS 343
             +  A   + K+ + + +
Sbjct: 628 SAVEGAFRFIKKFFERAEN 646


>gi|307186752|gb|EFN72197.1| Methionyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 540

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 37/121 (30%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    ++ D + R           T+    TD     I+ A      +        
Sbjct: 28  PHIGHLYSAVLADAVARYNTMLG---HKTFFTTGTDEHGNKIKVAA-----VAAGLPNLE 79

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
             +  +QQF +   R      +   R T   H   + +  + +   GH Y       +  
Sbjct: 80  YCTNISQQFKEMCDRFEVDY-SRFIRTTEKQHYDAVHHFWKRLEERGHIYLGKYSGWYCV 138

Query: 157 S 157
           S
Sbjct: 139 S 139


>gi|300703295|ref|YP_003744897.1| isoleucine--tRNA ligase [Ralstonia solanacearum CFBP2957]
 gi|299070958|emb|CBJ42266.1| Isoleucine--tRNA ligase [Ralstonia solanacearum CFBP2957]
          Length = 959

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   +  H   ++ EGRKMSKS GN I   E+            A +IRL +  T 
Sbjct: 612 YGKPPYKALLTHGFTVDGEGRKMSKSIGNTIAPQEIAGKMG-------AEIIRLWVAATD 664

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +  + + L        +   T
Sbjct: 665 YSGELAISDEILKRVVESYRRIRNT 689


>gi|298291756|ref|YP_003693695.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296928267|gb|ADH89076.1| methionyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 524

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 40/130 (30%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  +    +        +T  D+  ++ A+          
Sbjct: 20  PNGAPHIGHAYEKIAADALARFKKLDGYDVFF-----LTGTDEHGLKMAQTAEKQ---GL 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                 +KN  +F +    L  +      R T  +HI     + Q ++  G  Y      
Sbjct: 72  TPIEWATKNATRFKE-MDALLGVDYDRFIRTTDEDHILSSQAIWQRMVEAGDIYLGAYSG 130

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 131 WYSVRDEAYY 140



 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  I     ++ H GF++  G KMSKS GN I   +L
Sbjct: 263 DLHIIGKDIIRFHAVYWPAFLMSA-GIAPPKTVFAH-GFIHNRGEKMSKSVGNVIDPFDL 320

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                   +++    +R  +L
Sbjct: 321 -------AKAYGVDALRYFLL 334


>gi|256810785|ref|YP_003128154.1| isoleucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256793985|gb|ACV24654.1| isoleucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 1039

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN +  ++++E        + A ++R 
Sbjct: 573 ALSAIVFNDIPYKKCLMHGFTLDEHGDKMSKSLGNIVNPDDVVE-------KYGADLLRF 625

Query: 310 AMLMT 314
            +L  
Sbjct: 626 YLLSA 630


>gi|42560572|ref|NP_975023.1| methionyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|42492068|emb|CAE76665.1| Methionine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320800|gb|ADK69443.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
           str. Gladysdale]
          Length = 509

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 51/158 (32%), Gaps = 18/158 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+A    + D+L R  +    E        +T  D+      + E+ +   N      
Sbjct: 19  HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEH---GQKIENKAKEANLTPLEY 70

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII----LHGHAYEANNEIIFD 155
            +   Q F    T+L         R T+        +Q I       G+ Y+   E I+ 
Sbjct: 71  LNPKVQAFKDLWTKLNIDY-DKFIRTTD--DYHEKTVQKIFTILLEKGYIYKGQYEGIYC 127

Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            S        +  +IDE  +      K    N   + L
Sbjct: 128 VSCEE---FLTNEQIDENGLCKISNTKPQLVNENTYFL 162


>gi|315122106|ref|YP_004062595.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
 gi|313495508|gb|ADR52107.1| isoleucyl-tRNA synthetase [Candidatus Liberibacter solanacearum
           CLso-ZC1]
          Length = 960

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 33/184 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D H G     F H    + +SC         ++  H   ++  G KMSKS GN I  + +
Sbjct: 595 DQHRG----WFQH---SLLESCATRGSTPFTSLITHGFAVDENGEKMSKSKGNVIFPDTI 647

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT---EAEILLS---KWPQTSTSKG 345
           +           A ++R  ++ + Y +        +    +A   L    +W     +  
Sbjct: 648 ISESG-------ADILRFWVVNSDYHDDQRLGKNIIQTNIDAYRKLRNTIRWMLGVLAHD 700

Query: 346 IIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
                 LS      +           I  L +  RE+  N D   I     +    E+  
Sbjct: 701 TGKEPSLS------DVPELERFILHRITELDQTVREAYDNFDFKTIVRTLMNFSNFELSS 754

Query: 399 EHLN 402
            + +
Sbjct: 755 FYFD 758


>gi|306826992|ref|ZP_07460290.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430738|gb|EFM33749.1| valine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|209559725|ref|YP_002286197.1| valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540926|gb|ACI61502.1| Valyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|157884158|pdb|2V0G|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site.
 gi|157884159|pdb|2V0G|D Chain D, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Trna(Leu) Transcript With 5-Fluoro-1,3-Dihydro-1-
           Hydroxy-2,1-Benzoxaborole (An2690) Forming An Adduct To
           The Ribose Of Adenosine-76 In The Enzyme Editing Site
          Length = 877

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 44/165 (26%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ +   + DVL R  R    E  V +              A      +  
Sbjct: 42  PYPSGDLHMGHLKNYTMGDVLARFRRMQGYE--VLHPMGWDAFGLPAENAA------LKF 93

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T  N +Q  +    +  L        T   P+     Q     +   G AY A
Sbjct: 94  GVHPKDWTYANIRQAKESLRLMGILY-DWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRA 152

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              ++            +  ++ E +          K+    + L
Sbjct: 153 KG-LVNWCPKCQT--VLANEQVVEGRCWRHEDTPVEKRELEQWYL 194


>gi|146318113|ref|YP_001197825.1| valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320294|ref|YP_001200005.1| valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|253751303|ref|YP_003024444.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753204|ref|YP_003026344.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755027|ref|YP_003028167.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|145688919|gb|ABP89425.1| Valyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145691100|gb|ABP91605.1| Valyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|251815592|emb|CAZ51175.1| valyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817491|emb|CAZ55232.1| valyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819449|emb|CAR44947.1| valyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|292557873|gb|ADE30874.1| Valyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
 gi|319757585|gb|ADV69527.1| valyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 883

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 12/126 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    Y      +   G D+I       I Q           N  IH    + 
Sbjct: 459 GWPDENAADFQRYFPTSTLV--TGYDIIPFWVSRMIFQGIEFTGKSPFKNALIHGLIRDE 516

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAE 331
           EGRKMSKS GN I   +++E        + A  +R  +        + + F+ +++  + 
Sbjct: 517 EGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSNGSAP-GQDVRFSYEKMDASW 568

Query: 332 ILLSKW 337
             ++K 
Sbjct: 569 NFINKI 574


>gi|139438655|ref|ZP_01772139.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
 gi|133775735|gb|EBA39555.1| Hypothetical protein COLAER_01139 [Collinsella aerofaciens ATCC
           25986]
          Length = 533

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 15/126 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I+ DV  R  R          V+ +T +D+   + A         N 
Sbjct: 17  VNADPHLGTAYSTIIADVQARYRRSAGYN-----VKFLTGMDEHGEKVAEAAAKH---NM 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANN 150
                T      F +   +L           +PR  + +  +      +   G+ Y+ + 
Sbjct: 69  TPQEWTDSQAPHFKELWNKLEISNDDFIRTTEPRQHHAVQYLWE---RMKESGYLYKGSY 125

Query: 151 EIIFDT 156
           +  +  
Sbjct: 126 DGWYCV 131


>gi|254247500|ref|ZP_04940821.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
 gi|124872276|gb|EAY63992.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
           PC184]
          Length = 756

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 33/176 (18%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 345 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 402

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT------EAEI---LLSKWPQ-TSTS 343
           T            +R           ++ T++ +       +A +   L+ K+    S +
Sbjct: 403 T------GLNPEWLRYYFAAK-----LNATMEDIDLNLDDFQARVNSDLVGKYVNIASRA 451

Query: 344 KGIIDPAV-----LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
            G +          SA+ + L     +  L     +   +++      A  H + +
Sbjct: 452 AGFLIKRFDGRVQDSAMNHPL-----VAKLRDAIAQIAASYEAREYGRALRHTMEL 502


>gi|110005313|emb|CAK99637.1| leucyl-trna synthetase protein [Spiroplasma citri]
          Length = 805

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 8/77 (10%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L  +G KMSKS GN I  ++++++         A  +RL  M M      + +    L  
Sbjct: 576 LGTDGSKMSKSKGNVINPDDIIKSHG-------ADTLRLYEMFMGPIEASLPWNPNGLDS 628

Query: 330 AEILLSKWPQTSTSKGI 346
           A   L +  +   +   
Sbjct: 629 ARKWLDRVYRLIKNNNF 645


>gi|94994796|ref|YP_602894.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548304|gb|ABF38350.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|94990882|ref|YP_598982.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544390|gb|ABF34438.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|60390712|sp|Q6MSR0|SYL_MYCMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|301320514|gb|ADK69157.1| leucine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++     L  + RKMSKS GN I  +++++T         A  +RL  M M    
Sbjct: 562 EPFKRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHG-------ADALRLYEMFMGPLD 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYND-------------LNTV 362
             + ++   L  +   L++  +          +   L  +YND              NT 
Sbjct: 615 ASLPWSFDGLDASLKWLNRCYRMINKIEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNT- 673

Query: 363 SAIQALHKLARESTKNH 379
            AI  L  L     K  
Sbjct: 674 -AISQLMVLVNAIYKEE 689


>gi|19746507|ref|NP_607643.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81632599|sp|Q8P040|SYV_STRP8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|19748714|gb|AAL98142.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS8232]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|15675460|ref|NP_269634.1| valyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|81533485|sp|Q99YS1|SYV_STRP1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13622652|gb|AAK34355.1| putative valine-tRNA ligase [Streptococcus pyogenes M1 GAS]
          Length = 882

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|58697380|ref|ZP_00372706.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58536220|gb|EAL59776.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 494

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 46/157 (29%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKI------IERAR 84
           PT     HIG+AR  +  DVL  LL+    +    Y  N     ID  I       + A 
Sbjct: 103 PT--GPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIKSVYLRYKEAL 160

Query: 85  QEHPSIPINDAISI--------ITSKNTQQFV---------------------KDTTRLA 115
            E  SI                +  K  ++F+                     +D   L 
Sbjct: 161 GEKISIEKGLYPGEYLKPIGEGLAKKYGKEFLKKQDNQIIREYTLSFILELIKEDMNLLG 220

Query: 116 CLAPTHQPRATNHI----PQMIYLIQNIILHGHAYEA 148
                H    + +      ++   I+ +   G  YE 
Sbjct: 221 V---NHDVFTSEYELQKSGKIEESIKILSDKGLVYEG 254


>gi|319775147|ref|YP_004137635.1| leucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329122935|ref|ZP_08251506.1| leucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
 gi|317449738|emb|CBY85945.1| leucyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471866|gb|EGF17306.1| leucine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
          Length = 861

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 53/153 (34%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +        Q + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYQYQQNPAKTSLDITALSATQKALRREVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKASLESDQDRAVMA 751


>gi|240169909|ref|ZP_04748568.1| methionyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   I  D + R  R    +     VR +T  D+  ++       +       + 
Sbjct: 20  PHVGHAYEYIATDAIARFKRLDGFD-----VRFLTGTDEHGLK---VAQAAAAAGVPTAQ 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L   +     R T  +H      + + +   G  Y  N    +  
Sbjct: 72  LARRNSDVFQRMQEALNI-SFDRFIRTTDPDHYAASQEIWRRMEAAGDLYLDNYSGWYSV 130

Query: 157 S 157
            
Sbjct: 131 R 131



 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  IE    ++ H GFL+  G KMSKS GN I    L
Sbjct: 259 DLHMIGKDIIRFHAVYWPAFLMSA-GIELPRKVFAH-GFLHNRGEKMSKSVGNVIDPVAL 316

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +       +++    +R  +L
Sbjct: 317 I-------QAYGVDQVRYFLL 330


>gi|91789693|ref|YP_550645.1| isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
 gi|91698918|gb|ABE45747.1| Isoleucyl-tRNA synthetase [Polaromonas sp. JS666]
          Length = 943

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 36/103 (34%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +C          +  H   ++ +GRKMSKS GN +   E+ +          A +IRL  
Sbjct: 597 ACAMYDHAPYKGLLTHGFTVDGKGRKMSKSEGNVVVPQEVSDKLG-------AEIIRLWC 649

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
             T Y   +    + L        +   T      +    DPA
Sbjct: 650 ASTDYSGDLGIDDKILARVVDAYRRIRNTLRFLMANVSDFDPA 692


>gi|86606068|ref|YP_474831.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|86554610|gb|ABC99568.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A            +GFL  +G KM KS GN +   EL
Sbjct: 259 DVHLVGKDIVRFHAIYWPAMLMSA--GLPLPRQIFGHGFLTKDGLKMGKSLGNTLDPFEL 316

Query: 292 LETKKFGGRSWPAPVIRLAMLM 313
           +       + + A  +R   L 
Sbjct: 317 V-------QRYGADAVRYYFLT 331


>gi|71911105|ref|YP_282655.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71853887|gb|AAZ51910.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 801

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 397 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 454

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 455 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 492


>gi|42561235|ref|NP_975686.1| leucyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|42492733|emb|CAE77328.1| leucine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
          Length = 810

 Score = 41.4 bits (96), Expect = 0.31,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++     L  + RKMSKS GN I  +++++T         A  +RL  M M    
Sbjct: 568 EPFKRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHG-------ADALRLYEMFMGPLD 620

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYND-------------LNTV 362
             + ++   L  +   L++  +          +   L  +YND              NT 
Sbjct: 621 ASLPWSFDGLDASLKWLNRCYRMINKIEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNT- 679

Query: 363 SAIQALHKLARESTKNH 379
            AI  L  L     K  
Sbjct: 680 -AISQLMVLVNAIYKEE 695


>gi|320451519|ref|YP_004203615.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320151688|gb|ADW23066.1| leucyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 883

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 18/185 (9%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           +              + V  P      H+G+ +   + DVL R  +    E  V +    
Sbjct: 29  KAKE--VPGRKGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYE--VLHPMGW 84

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
                     A      +         T +N +Q  +    +  L        T   P  
Sbjct: 85  DAFGLPAENAA------LKFGLHPRDWTYENIRQAKESLELMGILY-DWDREVTTCEPDY 137

Query: 133 IYLIQ----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
               Q     +   G AY A   + +           +  ++ E +          K+  
Sbjct: 138 YRFNQWIFLKMWEKGLAYRAKGLVNWCPRCQT---VLANEQVVEGRCWRHEDTPVEKREL 194

Query: 189 ADFIL 193
             + L
Sbjct: 195 EQWYL 199


>gi|291570477|dbj|BAI92749.1| isoleucyl-tRNA synthetase [Arthrospira platensis NIES-39]
          Length = 964

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S     I     +  H   L+  GRKMSKS GN +    +
Sbjct: 568 DIYLEGSDQHRGWFQSSLLTSVANYGIAPYKTVLTHGFVLDENGRKMSKSIGNVVDPAVV 627

Query: 292 LETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKG 345
           +   K   +   + A ++RL +    Y   +      L +   +  K   T+     +  
Sbjct: 628 INGGKNQQQEPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLH 687

Query: 346 IIDPAVLSALYNDL 359
             DPA  +  Y DL
Sbjct: 688 DFDPAKDAIAYQDL 701


>gi|288553603|ref|YP_003425538.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544763|gb|ADC48646.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 880

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 48/126 (38%), Gaps = 11/126 (8%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           P D   WK+   +   W S   W     GW    +A    +     ++   G D+IF   
Sbjct: 436 PKDPENWKQDEDVLDTWFSSALWPFSTMGWPDTNAADYERF--YTTNVLVTGYDIIFFWV 493

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I Q           ++ IH    + EGRKMSKS GN +   ++++        + A 
Sbjct: 494 SRMIFQGLEFTGKRPFNDVLIHGLVRDSEGRKMSKSLGNGVDPMDVID-------KYGAD 546

Query: 306 VIRLAM 311
            +R  +
Sbjct: 547 ALRFFL 552


>gi|195011623|ref|XP_001983237.1| GH15697 [Drosophila grimshawi]
 gi|193896719|gb|EDV95585.1| GH15697 [Drosophila grimshawi]
          Length = 871

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 48/159 (30%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R           +N+             E+ +   
Sbjct: 71  PYPSGNLHMGHVRVYSISDAVARFHRMCG--------KNVFQPIGWDSFGLPAENAANQR 122

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEA 148
             A +  T +N  Q  +   RL C        +T+  P+     Q+    +   G AY+ 
Sbjct: 123 GVAPAEWTQQNIGQMKQQLERLGCSFDWSHELSTSS-PEYYKWTQSLFLMLHKQGLAYQN 181

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D      R   K  KK
Sbjct: 182 EALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|218437104|ref|YP_002375433.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
 gi|218169832|gb|ACK68565.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
          Length = 530

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 9/124 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV+ R  R          V  IT  D+      + +  +     
Sbjct: 20  VNDIPHIGSAYTTMIADVIARWKRLQGY-----SVLLITGTDEH---GQKIQRTAESKGL 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEII 153
                  +   +F     +L          ++  H   +    Q +   G  Y    +  
Sbjct: 72  NPQAHCDRIVDEFKTLWDKLNISYDRFSRTSSERHQDIVKEFFQRVWEQGDIYLDQQKGW 131

Query: 154 FDTS 157
           +  +
Sbjct: 132 YCVA 135


>gi|182415676|ref|YP_001820742.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
 gi|177842890|gb|ACB77142.1| leucyl-tRNA synthetase [Opitutus terrae PB90-1]
          Length = 857

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 58/139 (41%), Gaps = 18/139 (12%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E    ++     L  +G KMSKS GN +  + ++ +            +RL ++   +  
Sbjct: 608 EPFTRLFHQGIILGEDGEKMSKSRGNVVNPDTIIASHGT-------DTLRLYLM---FLG 657

Query: 319 PID----FTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
           P++    +++Q++      L K W +     G ++P + +           I+ LH+  +
Sbjct: 658 PLEAMKPWSMQQIEGVHRFLQKVWRECIGPDGKVNPKISAQAAEP---AEVIKVLHETIK 714

Query: 374 ESTKNHDLLPIFNASAHIL 392
           +  ++ + L    A + ++
Sbjct: 715 KVGEDIEALRFNTAISQMM 733


>gi|154151464|ref|YP_001405082.1| leucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|154000016|gb|ABS56439.1| leucyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 926

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 54/161 (33%), Gaps = 20/161 (12%)

Query: 221 AMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           AM   +L    +D      DLI  H   +I         +K     +  G   L G KMS
Sbjct: 549 AMREEFLYWYPYDYRFSAKDLISNHLTFQIFHHVTIFPKDKLPKGMVVFGMGLLNGAKMS 608

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSK- 336
            S GN   + + +         + A  +R+ +  +   + +  D+  + +   +  + + 
Sbjct: 609 SSKGNVFLLEDAVS-------EFGADTVRMFLTGSAEPW-QDFDWRNELVLSTKKQIERV 660

Query: 337 ------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
                    T      ID  ++S L    +   A  AL   
Sbjct: 661 YSTIMEIKDTGGEPQDIDRWLISRLQE--HIAKATAALENF 699



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 16/41 (39%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  I  DV+ R  R    +       ++T
Sbjct: 38 PYPSGAMHVGHGRTYIAPDVIARFWRMRGKQVLFPMAFHVT 78


>gi|15603944|ref|NP_220459.1| arginyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226193|sp|Q9ZE81|SYR_RICPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|3860635|emb|CAA14536.1| ARGINYL-TRNA SYNTHETASE (argS) [Rickettsia prowazekii]
 gi|292571662|gb|ADE29577.1| Arginyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 576

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVN 164


>gi|46200127|ref|YP_005794.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
 gi|31615792|pdb|1OBH|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Pre-Transfer Editing Substrate Analogue In Both
           Synthetic Active Site And Editing Site
 gi|313507210|pdb|2BTE|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507211|pdb|2BTE|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           With A Trnaleu Transcript In The Post-Editing
           Conformation And A Post-Transfer Editing Substrate
           Analogue
 gi|313507217|pdb|2BYT|A Chain A, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|313507218|pdb|2BYT|D Chain D, Thermus Thermophilus Leucyl-Trna Synthetase Complexed With
           A Trnaleu Transcript In The Post-Editing Conformation
 gi|46197755|gb|AAS82167.1| leucyl-tRNA synthetase [Thermus thermophilus HB27]
          Length = 878

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 44/165 (26%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ +   + DVL R  R    E  V +              A      +  
Sbjct: 42  PYPSGDLHMGHLKNYTMGDVLARFRRMQGYE--VLHPMGWDAFGLPAENAA------LKF 93

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T  N +Q  +    +  L        T   P+     Q     +   G AY A
Sbjct: 94  GVHPKDWTYANIRQAKESLRLMGILY-DWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRA 152

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              ++            +  ++ E +          K+    + L
Sbjct: 153 KG-LVNWCPKCQT--VLANEQVVEGRCWRHEDTPVEKRELEQWYL 194


>gi|88807987|ref|ZP_01123498.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
 gi|88788026|gb|EAR19182.1| isoleucyl-tRNA synthetase [Synechococcus sp. WH 7805]
          Length = 968

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 600 SVAVNGKAPYKRVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPFGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 660 WVSSVDYSADVPIGAGILRQIADVYRKVRNTSR 692


>gi|157825222|ref|YP_001492942.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166232832|sp|A8GM09|SYR_RICAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157799180|gb|ABV74434.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 576

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGYFVTKEYYVN 164


>gi|325523984|gb|EGD02180.1| methionyl-tRNA synthetase [Burkholderia sp. TJI49]
          Length = 718

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 365 T------GLNPEWLRYYFAAK-----LNATMEDLD 388


>gi|319939650|ref|ZP_08014009.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
 gi|319811239|gb|EFW07545.1| valyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
          Length = 883

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRRPFENVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM 311
                 + A  +R  +
Sbjct: 537 -----KYGADALRWFL 547


>gi|295694735|ref|YP_003587973.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410337|gb|ADG04829.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 684

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 13/137 (9%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
                Y+  P  Y  +  HIG+A   +  D + R  R    +  V Y+    +   KI  
Sbjct: 2   GRKTFYITTPIYYPSNKLHIGHAYTTVAADAMARYKRLRGYD--VMYLTGTDEHGQKIER 59

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNI 139
           RAR+E  +        +      Q+  +       ++     R T   H   +  + Q +
Sbjct: 60  RAREEGKTPQAFVDEIV---GWIQELWRKLD----ISYDDFIRTTEPRHKKAVQRIFQRL 112

Query: 140 ILHGHAYEANNEIIFDT 156
           +  G  Y+A+ E ++ T
Sbjct: 113 MEQGDIYQADYEGLYCT 129


>gi|254167151|ref|ZP_04874004.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
 gi|197624007|gb|EDY36569.1| leucyl-tRNA synthetase [Aciduliprofundum boonei T469]
          Length = 939

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 33/98 (33%), Gaps = 7/98 (7%)

Query: 18  FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F+    +  + ++  P  Y     HIG+ R   + D++ R  R            ++T  
Sbjct: 20  FEPKVENKKKFFITVPYPYMSGSLHIGHGRTFTMGDIIARFKRLQGYNVLFPMAFHVTGT 79

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
               I  A +      IN     +  +  + +  D  R
Sbjct: 80  PVLAIADAIKAGDEKVIN-----LYKEYVRIYEDDENR 112


>gi|146329154|ref|YP_001209826.1| methionyl-tRNA synthetase [Dichelobacter nodosus VCS1703A]
 gi|187647717|sp|A5EY62|SYM_DICNV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146232624|gb|ABQ13602.1| methionyl-trna synthetase [Dichelobacter nodosus VCS1703A]
          Length = 673

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A    A   + T  ++ H GFL + G KMSKS G FI     L 
Sbjct: 289 HFIGKDIAYFHMLFWPAMLEGAGLQKPTG-VFCH-GFLTVNGEKMSKSRGTFIKARTYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R  +  
Sbjct: 346 ------KHLRPEYLRYYIAS 359


>gi|221134806|ref|ZP_03561109.1| methionyl-tRNA synthetase [Glaciecola sp. HTCC2999]
          Length = 685

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 11/81 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H  G D+++ H     A    A+  + T  NI   +GF+ + G KMSKS G FI     L
Sbjct: 290 HFIGKDIMYFHCLFWPAMLEGANYRKPTGVNI---HGFVTVNGAKMSKSKGTFIKARTYL 346

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
           E             +R     
Sbjct: 347 E-------HLNPEYLRYYFAS 360


>gi|18977752|ref|NP_579109.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|23822193|sp|Q8U149|SYR_PYRFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18893491|gb|AAL81504.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 629

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+AR  I+ D + R+LR+   +     V+N   IDD  ++ A+     + +
Sbjct: 130 PT--KPLHMGHARNAILGDTVARILRFLGYQVE---VQNY--IDDLGVQFAQVYWGYLNL 182

Query: 93  NDAISIITSK 102
                 +  +
Sbjct: 183 KRKFDELMKE 192


>gi|251792930|ref|YP_003007656.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247534323|gb|ACS97569.1| methionyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 686

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 22/135 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K +NI++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIMYFHSLFWPAMLEGA-GFRKPSNIFVH-GYVTVNGEKMSKSRGTFIQAATYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +      +R      L    R + +D  ++   +      ++K     S + G 
Sbjct: 348 ------KHLDPECLRYYYAAKLSN--RIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGF 399

Query: 347 IDPAV----LSALYN 357
           I         +AL +
Sbjct: 400 IQKRFDGKLAAALDD 414


>gi|145629338|ref|ZP_01785137.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
 gi|144978841|gb|EDJ88564.1| tellurite resistance protein TehB [Haemophilus influenzae 22.1-21]
          Length = 548

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 156 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 213

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 214 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLDDFVQRVNTDIVNKLVNLA 258

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 259 SRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 318

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 319 YIDEKAPWVIAK 330


>gi|288574736|ref|ZP_06393093.1| leucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
 gi|288570477|gb|EFC92034.1| leucyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM 11002]
          Length = 835

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 17/158 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D+  R LR       V +              A      I       + 
Sbjct: 51  HVGHPEGYTATDIYCRFLRMKGY--AVLHPMGFDSFGLPAENYA------IKTGTHPVVT 102

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T +N ++F +    L           + H        Q     +   G AYEA   I + 
Sbjct: 103 TERNIERFREQIKSLGFSY-DWDREVSTHKSDYYRWTQWIFLKLFEKGLAYEAETPINWC 161

Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            S        +  ++ E +   R   +  ++N   +IL
Sbjct: 162 PSCQTG---LANEEVKEGRC-ERCGAQVERRNLRQWIL 195


>gi|194476997|ref|YP_002049176.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
 gi|171192004|gb|ACB42966.1| isoleucyl-tRNA synthetase [Paulinella chromatophora]
          Length = 967

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN I    +L+  K       + A ++RL
Sbjct: 594 STAVNGYAPYKKVITHGFVLDEKGRKMSKSLGNIIDPASILKGGKNQKDEPPYGADILRL 653

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 654 WVSSVDYSVDVSIGSNVLKQLADVYRKVRNTSR 686


>gi|125624531|ref|YP_001033014.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris MG1363]
 gi|166231617|sp|A2RLY6|SYL_LACLM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|124493339|emb|CAL98313.1| LeuS protein [Lactococcus lactis subsp. cremoris MG1363]
 gi|300071325|gb|ADJ60725.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris NZ9000]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  A   L
Sbjct: 608 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIPWSEEGLEGARKFL 660

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +        + + G +D             L  +Y   NT  AI  L        K
Sbjct: 661 DRAVRMIENSEIKAENNGELDKVYNETVKNVTERLDLMY--FNT--AISQLMIFVNAVNK 716

Query: 378 NHDL 381
              L
Sbjct: 717 AKAL 720


>gi|297180539|gb|ADI16751.1| leucyl-tRNA synthetase [uncultured gamma proteobacterium
           HF0010_11B23]
          Length = 658

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 14/76 (18%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           +  G +  +G KMSKS GN +   E +E       ++ A  IR  M+      P    ++
Sbjct: 546 LTQGMVLKDGAKMSKSKGNTVDPKEYIE-------NYGADSIRTFMIFA---SPPEQSLE 595

Query: 322 FTVQRLTEAEILLSKW 337
           ++   L      L + 
Sbjct: 596 WSDNGLEGCHKFLKRL 611


>gi|119953049|ref|YP_945258.1| leucyl-tRNA synthetase [Borrelia turicatae 91E135]
 gi|254782485|sp|A1QZ46|SYL_BORT9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119861820|gb|AAX17588.1| leucyl-tRNA synthetase [Borrelia turicatae 91E135]
          Length = 842

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 23/175 (13%)

Query: 20  AIDPSNIRMYVCGPTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              P   R+Y+     Y   +  H+G+       D+L R          V +        
Sbjct: 29  PNIPKEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRY--KLLNGFNVLHPMGFDSFG 86

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQPRATNHIPQMIYL 135
                 A      I   +    IT KN ++F +    L        + R  +        
Sbjct: 87  LPAENYA------IQTGEHPKKITEKNIEKFKEQIKALGFAYDWDREIRTHD--ENYYKW 138

Query: 136 IQ----NIILHGHAYEANNEIIFDTSSIPNYGS-FSRRKIDEQKMGTRVPEKYHK 185
            Q     +   G AY     + +     P+ G+  S  ++ +   G R    +HK
Sbjct: 139 TQWIFLKLYKKGLAYIKEMPVWYC----PDLGTVLSNEEVIQTPDGPRSERGFHK 189


>gi|148681125|gb|EDL13072.1| isoleucine-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 1003

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S           + +H   L  +G KMSKS GN I  + ++   K   +   + A ++R 
Sbjct: 541 SVATRSKAPFRTVMVHGFTLGEKGEKMSKSLGNVINPDTIISGGKDHSKEPPYGADILRW 600

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L+ A   +SK   T
Sbjct: 601 WIAESNVFTEVTIGPSVLSAARDDISKLRNT 631


>gi|26331214|dbj|BAC29337.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S           + +H   L  +G KMSKS GN I  + ++   K   +   + A ++R 
Sbjct: 639 SVATRSKAPFRTVMVHGFTLGEKGEKMSKSLGNVINPDTIISGGKDHSKEPPYGADILRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L+ A   +SK   T
Sbjct: 699 WIAESNVFTEVTIGPSVLSAARDDISKLRNT 729


>gi|20071710|gb|AAH27432.1| Iars2 protein [Mus musculus]
          Length = 536

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S           + +H   L  +G KMSKS GN I  + ++   K   +   + A ++R 
Sbjct: 163 SVATRSKAPFRTVMVHGFTLGEKGEKMSKSLGNVINPDTIISGGKDHSKEPPYGADILRW 222

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L+ A   +SK   T
Sbjct: 223 WIAESNVFTEVTIGPSVLSAARDDISKLRNT 253


>gi|74184865|dbj|BAE39055.1| unnamed protein product [Mus musculus]
          Length = 1012

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S           + +H   L  +G KMSKS GN I  + ++   K   +   + A ++R 
Sbjct: 639 SVATRSKAPFRTVMVHGFTLGEKGEKMSKSLGNVINPDTIISGGKDHSKEPPYGADILRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L+ A   +SK   T
Sbjct: 699 WIAESNVFTEVTIGPSVLSAARDDISKLRNT 729


>gi|38490690|ref|NP_941055.1| isoleucyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|81896262|sp|Q8BIJ6|SYIM_MOUSE RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS; Flags:
           Precursor
 gi|26339478|dbj|BAC33410.1| unnamed protein product [Mus musculus]
 gi|30931090|gb|AAH52403.1| Isoleucine-tRNA synthetase 2, mitochondrial [Mus musculus]
          Length = 1012

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S           + +H   L  +G KMSKS GN I  + ++   K   +   + A ++R 
Sbjct: 639 SVATRSKAPFRTVMVHGFTLGEKGEKMSKSLGNVINPDTIISGGKDHSKEPPYGADILRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L+ A   +SK   T
Sbjct: 699 WIAESNVFTEVTIGPSVLSAARDDISKLRNT 729


>gi|24379039|ref|NP_720994.1| isoleucyl-tRNA synthetase [Streptococcus mutans UA159]
 gi|81452146|sp|Q8DVD3|SYI_STRMU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|24376934|gb|AAN58300.1|AE014900_8 isoleucine-tRNA synthetase [Streptococcus mutans UA159]
          Length = 930

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 20/160 (12%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S   +      ++      L+ +G KMSKS GN I
Sbjct: 545 LGYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKSVLSQGFVLDGKGEKMSKSKGNII 604

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           + N++        + + A ++RL +        +  +++ L +      K   T      
Sbjct: 605 SPNDV-------AKQYGAEILRLWVASVDTDSDVRVSMEILGQVSETYRKIRNTLR---- 653

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
                L A   D N       ++K+A E  ++ D   +  
Sbjct: 654 ----FLIANTTDFN-----PYINKIAFEDLRSVDKYMLIK 684


>gi|284053011|ref|ZP_06383221.1| isoleucyl-tRNA synthetase [Arthrospira platensis str. Paraca]
          Length = 922

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 51/134 (38%), Gaps = 6/134 (4%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S     I     +  H   L+  GRKMSKS GN +    +
Sbjct: 568 DIYLEGSDQHRGWFQSSLLTSVANYGIAPYKTVLTHGFVLDENGRKMSKSIGNVVDPAVV 627

Query: 292 LETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKG 345
           +   K   +   + A ++RL +    Y   +      L +   +  K   T+     +  
Sbjct: 628 INGGKNQQQEPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTARFLLGNLH 687

Query: 346 IIDPAVLSALYNDL 359
             DPA  +  Y DL
Sbjct: 688 DFDPAKDAIAYQDL 701


>gi|289192671|ref|YP_003458612.1| isoleucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
 gi|288939121|gb|ADC69876.1| isoleucyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
          Length = 1039

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 7/65 (10%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S             +H   L+  G KMSKS GN +  ++++E        + A ++R 
Sbjct: 573 ALSAIVFNDIPYKKCLMHGFTLDEHGDKMSKSLGNIVNPDDVVE-------KYGADLLRF 625

Query: 310 AMLMT 314
            +L  
Sbjct: 626 YLLSA 630


>gi|15672798|ref|NP_266972.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|14285774|sp|Q9CHB6|SYL_LACLA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|12723739|gb|AAK04914.1|AE006315_3 leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
 gi|326406367|gb|ADZ63438.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
          Length = 829

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 42/124 (33%), Gaps = 29/124 (23%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  A   L
Sbjct: 608 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIPWSEEGLEGARKFL 660

Query: 335 SKWPQ-------TSTSKGIIDP----------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +        + + G +D             L  +Y   NT  AI  L        K
Sbjct: 661 DRAVRMIENSEIKAENNGELDKVYNETVKNVTERLDLMY--FNT--AISQLMIFVNAVNK 716

Query: 378 NHDL 381
              L
Sbjct: 717 AKAL 720


>gi|303233314|ref|ZP_07319985.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302480614|gb|EFL43703.1| leucine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 877

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 44/147 (29%), Gaps = 20/147 (13%)

Query: 19  QAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
                S  + YV    P      H+G+AR   + DV+ R L     +  V +        
Sbjct: 38  TPSSSSKPKQYVLEMFPYPSGDLHMGHARNYTIGDVMARQLHMRGYD--VLHPMGFDAFG 95

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP------ 130
                 A + H         S+ T  N +Q      R+         R  N         
Sbjct: 96  LPAENAAIKHHTE------PSVWTYGNIKQATATMKRMGFSYD--YSRTFNTCDPEYYRW 147

Query: 131 QMIYLIQNIILHGHAYEANNEI-IFDT 156
                I  +   G AY A +++   DT
Sbjct: 148 GQWMFI-KMWEKGLAYRAYSDVNWCDT 173


>gi|15840435|ref|NP_335472.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31792198|ref|NP_854691.1| methionyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
 gi|121636936|ref|YP_977159.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
           1173P2]
 gi|148822217|ref|YP_001286971.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis F11]
 gi|215402823|ref|ZP_03415004.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
 gi|215410610|ref|ZP_03419418.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|215426286|ref|ZP_03424205.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T92]
 gi|215429868|ref|ZP_03427787.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
 gi|215445157|ref|ZP_03431909.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T85]
 gi|218752679|ref|ZP_03531475.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
 gi|219556874|ref|ZP_03535950.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T17]
 gi|224989408|ref|YP_002644095.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253799963|ref|YP_003032964.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           1435]
 gi|254231302|ref|ZP_04924629.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C]
 gi|254363923|ref|ZP_04979969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254549993|ref|ZP_05140440.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
           INH-RIF-EM']
 gi|260185918|ref|ZP_05763392.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
 gi|260200036|ref|ZP_05767527.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|260204225|ref|ZP_05771716.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis K85]
 gi|289442428|ref|ZP_06432172.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289446589|ref|ZP_06436333.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A]
 gi|289555210|ref|ZP_06444420.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605]
 gi|289568984|ref|ZP_06449211.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17]
 gi|289573647|ref|ZP_06453874.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85]
 gi|289744743|ref|ZP_06504121.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987]
 gi|289749536|ref|ZP_06508914.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92]
 gi|289753068|ref|ZP_06512446.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054]
 gi|289757090|ref|ZP_06516468.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85]
 gi|289761143|ref|ZP_06520521.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503]
 gi|294995197|ref|ZP_06800888.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 210]
 gi|297633534|ref|ZP_06951314.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
 gi|297730519|ref|ZP_06959637.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
 gi|298524503|ref|ZP_07011912.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|306781942|ref|ZP_07420279.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002]
 gi|306783703|ref|ZP_07422025.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003]
 gi|306788058|ref|ZP_07426380.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004]
 gi|306792391|ref|ZP_07430693.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005]
 gi|306796794|ref|ZP_07435096.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006]
 gi|306802680|ref|ZP_07439348.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008]
 gi|306806859|ref|ZP_07443527.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007]
 gi|306967060|ref|ZP_07479721.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009]
 gi|313657848|ref|ZP_07814728.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
 gi|38258294|sp|P59952|SYM_MYCBO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13880605|gb|AAK45286.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
 gi|31617786|emb|CAD93895.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA
           ligase) [Mycobacterium bovis AF2122/97]
 gi|121492583|emb|CAL71051.1| Probable methionyl-trna synthetase metS [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|124600361|gb|EAY59371.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis C]
 gi|134149437|gb|EBA41482.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148720744|gb|ABR05369.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis F11]
 gi|224772521|dbj|BAH25327.1| methionyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
 gi|253321466|gb|ACT26069.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           1435]
 gi|289415347|gb|EFD12587.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis T46]
 gi|289419547|gb|EFD16748.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis CPHL_A]
 gi|289439842|gb|EFD22335.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN 605]
 gi|289538078|gb|EFD42656.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis K85]
 gi|289542738|gb|EFD46386.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T17]
 gi|289685271|gb|EFD52759.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis 02_1987]
 gi|289690123|gb|EFD57552.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T92]
 gi|289693655|gb|EFD61084.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis EAS054]
 gi|289708649|gb|EFD72665.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis GM 1503]
 gi|289712654|gb|EFD76666.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis T85]
 gi|298494297|gb|EFI29591.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
 gi|308325333|gb|EFP14184.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu002]
 gi|308331486|gb|EFP20337.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu003]
 gi|308335292|gb|EFP24143.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu004]
 gi|308339100|gb|EFP27951.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu005]
 gi|308342772|gb|EFP31623.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu006]
 gi|308346681|gb|EFP35532.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu007]
 gi|308350596|gb|EFP39447.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu008]
 gi|308355229|gb|EFP44080.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu009]
 gi|323720508|gb|EGB29590.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904766|gb|EGE51699.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis W-148]
 gi|328459706|gb|AEB05129.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis KZN
           4207]
          Length = 519

 Score = 41.4 bits (96), Expect = 0.33,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   I  D + R  R    +     VR +T  D+  ++       +       + 
Sbjct: 17  PHVGHAYEYIATDAIARFKRLDGYD-----VRFLTGTDEHGLK---VAQAAAAAGVPTAA 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L   +     R T  +H      L + +   G  Y  N    +  
Sbjct: 69  LARRNSDVFQRMQEALNI-SFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYSGWYSV 127

Query: 157 S 157
            
Sbjct: 128 R 128


>gi|302882418|ref|XP_003040119.1| hypothetical protein NECHADRAFT_44437 [Nectria haematococca mpVI
           77-13-4]
 gi|256720987|gb|EEU34406.1| hypothetical protein NECHADRAFT_44437 [Nectria haematococca mpVI
           77-13-4]
          Length = 1106

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 45/139 (32%), Gaps = 28/139 (20%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIH----NGFLNLEGRKMSKSNGNFITINE 290
             G DLI  H    +         +     W      NG L L G KMSKS GNF+T+ +
Sbjct: 703 SSGKDLINNHLTFFLYVHLAIWEDQP--EYWPRGIRCNGHLMLNGEKMSKSTGNFMTLQD 760

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQ-------- 339
           L+         + A   R+ +      + I   +     +  A + L    +        
Sbjct: 761 LVS-------KYGADATRIGLADAG--DGIGDSNLVEDSIDSAILRLYTLREWIQETLKS 811

Query: 340 --TSTSKGIIDPAVLSALY 356
              S     +D    + + 
Sbjct: 812 TLRSGELNYMDKMFANEMN 830


>gi|188527820|ref|YP_001910507.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144060|gb|ACD48477.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 662

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|90022211|ref|YP_528038.1| isoleucyl-tRNA synthetase [Saccharophagus degradans 2-40]
 gi|122996062|sp|Q21HK3|SYI_SACD2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|89951811|gb|ABD81826.1| Isoleucyl-tRNA synthetase [Saccharophagus degradans 2-40]
          Length = 932

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +G+KMSKS GN ++  +++           A V+RL +
Sbjct: 575 SMAINGSAPYKQVLTHGFTVDADGKKMSKSIGNTVSPQKVMNDLG-------ADVLRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T +   +  + + L        +   T+ 
Sbjct: 628 AATDFSGDMSVSDEILKRTADSYRRIRNTAR 658


>gi|330507469|ref|YP_004383897.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928277|gb|AEB68079.1| isoleucyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 1053

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 34/122 (27%)

Query: 240 LIFPHHENEIAQSCCA---DRIEKTANIW---------------------IHNGFLNLEG 275
           L FP HE E  +   A            W                     +H   L+ +G
Sbjct: 534 LRFPSHEEEFGEWWPADFITEGHDQTRGWFYSQLGASMVSFGRAPYKSVLMHGFTLDDQG 593

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH--YREPIDFTVQRLTEAEIL 333
           RKMSKS GN +   E++E        + A ++R  +L  +  + E + F+ + +     +
Sbjct: 594 RKMSKSIGNIVQPEEVVER-------FGADILRFYVLGANAPW-EDLHFSWEAVENTSRM 645

Query: 334 LS 335
           ++
Sbjct: 646 IN 647


>gi|327354732|gb|EGE83589.1| leucyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 966

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 48/160 (30%), Gaps = 22/160 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DVL R  ++  G   +  +    D      E A  E    P 
Sbjct: 73  PYPSGALHMGHVRVYTISDVLARF-KHMKGYDVLHPMG--WDAFGLPAENAAIERGIDPA 129

Query: 93  NDAISIITSKNT------QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  I +          +F  D   L   +P        H  ++  +   +   G AY
Sbjct: 130 RWTMQNIANMKEQLRAIGARFDWDRE-LMTCSPEFY----KHTQRIFLM---LYEKGLAY 181

Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           +A   +              +  ++D      R   K  K
Sbjct: 182 QAKALVNYDPVDKT----VLANEQVDANGCSWRSGAKVEK 217


>gi|323359788|ref|YP_004226184.1| valyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323276159|dbj|BAJ76304.1| valyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 855

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 71/198 (35%), Gaps = 26/198 (13%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L   FD+   G D+I     + + +S   D     ++  I    ++ + +KMSKS GN +
Sbjct: 539 LVSPFDLRPQGQDIIRTWLFSTMLRSALEDDRSPWSDAAISGFIVDPDRKKMSKSKGNVV 598

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-------AEILLSKWPQ 339
           T  ++L+          +  +R     +       F  Q  T+       A  LL+    
Sbjct: 599 TPADILQQHG-------SDAVRYWSASSRLGTDAAFDPQNPTQVKIGRRLAIKLLNAAKF 651

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
             +        V  AL       S +  L  + R++T        F A  H   +E+ + 
Sbjct: 652 VLSFPVPEGAEVTHALD-----ASMLATLDAVVRDAT------AAFEAYDHARALEITES 700

Query: 400 HLNKNISIAIEKLVQERL 417
                    +E LV+ER 
Sbjct: 701 FFWTFCDDYLE-LVKERA 717


>gi|313618588|gb|EFR90560.1| leucyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|294654480|ref|XP_456540.2| DEHA2A05038p [Debaryomyces hansenii CBS767]
 gi|199428917|emb|CAG84495.2| DEHA2A05038p [Debaryomyces hansenii]
          Length = 944

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 51/180 (28%), Gaps = 32/180 (17%)

Query: 16  TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
             F  +      M+   P      H+G+ R   + DV+ R  R               ++
Sbjct: 75  EPFYCL-----SMF---PYPSGMLHMGHLRVYTISDVIARFKRLKGY-----------NV 115

Query: 76  DDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
              +   A     E+ ++      +I T  N Q+  +    L           +   P  
Sbjct: 116 IHPMGWDAFGLPAENAAVERGINPAIWTDSNIQKMKEQM-SLMLADFDWDREISTCSPDY 174

Query: 133 IYLIQNI----ILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
               Q I      HG AY    EI              +  ++D +    R      K+N
Sbjct: 175 YKWTQKIFLLLFEHGLAYRNEAEINWDPVDQT----VLANEQVDSEGKSWRSGALVEKRN 230


>gi|149187033|ref|ZP_01865340.1| valyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148829322|gb|EDL47766.1| valyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 902

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D++F      + Q            +++H      +G KMSKS GN +    L
Sbjct: 513 DLLISGFDILFFWDARMMMQGMHLTGKAPWPRLYLHGLVRAADGAKMSKSKGNVVDPLGL 572

Query: 292 LETKKFGGRSWPAPVIRLAM 311
           ++        + A  +R  M
Sbjct: 573 ID-------QYGADALRFFM 585


>gi|114771796|ref|ZP_01449189.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255]
 gi|114547612|gb|EAU50503.1| arginyl-tRNA synthetase [alpha proteobacterium HTCC2255]
          Length = 576

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 64/385 (16%), Positives = 121/385 (31%), Gaps = 69/385 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +  D L  LL +   +    Y  N       ++ R+         
Sbjct: 133 PT--GPLHVGHTRGAVFGDALASLLDFAGFDVTREYYINDGGAQVDVLARSVYLRYLEAN 190

Query: 93  NDAISIITSKNTQQFVKDTT-RLACLAPTHQP--RATNHIPQ--------MIYLIQNIIL 141
             A+  +       ++ +    L             T  I +        M+ LI++ + 
Sbjct: 191 GQAVEFVDGTYPGDYLVELGVDLKNKYGDSLVDKPETEWIAELRLFATEKMMDLIRSDLA 250

Query: 142 HGHAYEANNEIIFDTSSIPN--YGS-FSRRKIDEQKMGT----RVPEKYHKKNPADF--- 191
                     I  D        YG+      + +          V E    K P D+   
Sbjct: 251 -------LLGIRMDVFFSEKSLYGTGLIEAALADLDGKGLVYQGVLEPPKGKKPDDWEPR 303

Query: 192 --ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY------LGKVFDI----HGGGLD 239
              L+K +   +   + P  +    W      ++ H+        ++ DI    HGG + 
Sbjct: 304 EQTLFKSTEHGDDV-DRPIAKSDGSWTYFAPDIAYHFDKVQRGFDQLIDIFGADHGGYVK 362

Query: 240 LI---FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            +        N+  Q     ++ +   ++ +         KMSK  G F+T+ +++E   
Sbjct: 363 RMKAAVSALSNQ--QVSLDIKLTQLVKLYKNGEPF-----KMSKRAGTFVTLRDVVEQVG 415

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI---LLSKWPQTSTSKGIIDPAVLS 353
                    V R  ML      P+DF   ++ E      +       +    ++  A  +
Sbjct: 416 -------PDVTRFVMLTRKNDAPLDFDFAKVQEQSKDNPVFYVQYAHARISSVLSKAKDA 468

Query: 354 ALYNDLNT------VSAIQALHKLA 372
            +  D+ T       S I  + KLA
Sbjct: 469 NMKIDVKTFKSLKHPSEITVIKKLA 493


>gi|303241037|ref|ZP_07327547.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
 gi|302591462|gb|EFL61200.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
          Length = 643

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 57/180 (31%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A        E        +G+L LEG KMSKS GN +    L
Sbjct: 255 DVHLVGKEIVRFHTIIWPAMLMAL--GEPLPKQIYGHGWLLLEGGKMSKSKGNVVDPVVL 312

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE----------------AEILL 334
           +E        +    IR  +L    +     F+ + L                     ++
Sbjct: 313 VE-------KYGLDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNLVSRTVAMI 365

Query: 335 SKWPQTSTSKGIIDPAV--------------LSALYNDLNTVSAIQALHKLARESTKNHD 380
            K+         ++                 +  L + L   SA+  + K+   + K  D
Sbjct: 366 DKYFDGVMPDERLEGDFDQDLKKVVMETPPKVEQLLDKLQFSSALTEIWKVISRTNKYID 425



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 11/122 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG++   +  D + R  R    +     V  +T  D+      + +  +       
Sbjct: 17  DKLHIGHSYTTVAADAVARYKRLKGYD-----VMFLTGTDEH---GQKIQRKAEAKGVTP 68

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
                +     +KD  +L  +      R T+  H   +  + + +   G  Y++  E  +
Sbjct: 69  KQYVDE-IVDGIKDLWKLMKITNDRFIRTTDKNHEEAVQKIFKKLYDQGDIYKSEYEGWY 127

Query: 155 DT 156
            T
Sbjct: 128 CT 129


>gi|301170011|emb|CBW29615.1| methionyl-tRNA synthetase [Haemophilus influenzae 10810]
          Length = 682

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLDDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|297795625|ref|XP_002865697.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297311532|gb|EFH41956.1| hypothetical protein ARALYDRAFT_494966 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1095

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG--GRSWPAPVIRL 309
           S         + +  H   L+ +G KMSKS GN +  + ++E  K      ++ A V+RL
Sbjct: 698 SIATQGKAPYSAVITHGFVLDEKGMKMSKSLGNVVDPHLVIEGGKNSKDAPAYGADVMRL 757

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +    Y   +    Q L +   +  K   T
Sbjct: 758 WVSSVDYTGDVLIGPQILRQMSDIYRKLRGT 788


>gi|296131644|ref|YP_003638891.1| methionyl-tRNA synthetase [Thermincola sp. JR]
 gi|296030222|gb|ADG80990.1| methionyl-tRNA synthetase [Thermincola potens JR]
          Length = 647

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 61/180 (33%), Gaps = 40/180 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H    I         E      + +G+L LEG KMSKS GN I    L
Sbjct: 253 DVHLVGKDIVRFHTI--IWPILLMAIGEPLPKKVMGHGWLLLEGGKMSKSKGNVIDPLVL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THY---------REPI-----DFTVQRLTEA 330
           ++        +    IR  +L         +Y            +     +   + +   
Sbjct: 311 ID-------KYGVDAIRYYLLRELPFGSDGYYAEEALIQRINSDLANDLGNLISRTIAMV 363

Query: 331 EILLSKWPQTSTSKGIIDPAVLS-AL---------YNDLNTVSAIQALHKLARESTKNHD 380
           E   +   Q  T K  ID  +   A+            L   +A+ ++ KL   + K  D
Sbjct: 364 EKYFNGMVQAPTEKEEIDEDLRQLAMVTVEDYRNQMEKLELSNALASIWKLIGRANKYID 423



 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 15/124 (12%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+A   +  D + R  R    +     VR +T  D+      + E  +       
Sbjct: 16  DNLHIGHAYTTVAADTIARYKRMTGYD-----VRFLTGSDEH---GQKIERTAKARGVEP 67

Query: 97  SIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
                +    F      L           +PR    + ++      +   G  Y++  E 
Sbjct: 68  IDYVDRIVAGFKNLWRHLDVHYDDFIRTTEPRHKEVVQKIFT---RLYEQGDIYKSEYEG 124

Query: 153 IFDT 156
           ++ T
Sbjct: 125 LYCT 128


>gi|239946988|ref|ZP_04698741.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921264|gb|EER21288.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 576

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVN 164


>gi|254478485|ref|ZP_05091861.1| leucyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
 gi|214035574|gb|EEB76272.1| leucyl-tRNA synthetase [Carboxydibrachium pacificum DSM 12653]
          Length = 727

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 37/147 (25%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFT 323
           +H G  L  +G +MSKS GN I+ ++ +       + + + V RL ++    Y E   ++
Sbjct: 474 VHQGTILGPDGSRMSKSRGNVISPDDYI-------KQYGSDVFRLYLMFGFSYSEGGPWS 526

Query: 324 VQRLTE-------AEILLSKWPQTSTSKGIIDPAVLSA----------------LYND-- 358
            + +          E  + K+ +T  + G     +  A                L  D  
Sbjct: 527 DEGIKAIARFVNRVERFIEKFIETRQNPGKTKEEMEDAEKELNYVRHYTIKHVTLDADKF 586

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPI 384
             NT  AI  + +L     K  + + +
Sbjct: 587 EFNT--AIARIMELVNALYKYENEVEV 611


>gi|23099762|ref|NP_693228.1| leucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|32171556|sp|Q8EP12|SYL_OCEIH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|22777992|dbj|BAC14263.1| leucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 804

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PIDIYIGGAEHAVLHLLYARFWHKFLFDIGVVSTKEPFQKLYNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++++         A  +RL  M M      + ++   L  +   L + W    
Sbjct: 583 NVVNPDDIIDSHG-------ADTLRLYEMFMGPLDASVAWSTNGLDGSRRFLDRVWRLYV 635

Query: 342 TSKGIIDPAVLS 353
              G +   ++ 
Sbjct: 636 GDDGSLTDKIID 647


>gi|300692742|ref|YP_003753737.1| arginyl-tRNA synthetase [Ralstonia solanacearum PSI07]
 gi|299079802|emb|CBJ52479.1| Arginyl-tRNA synthetase [Ralstonia solanacearum PSI07]
          Length = 600

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 52/328 (15%), Positives = 98/328 (29%), Gaps = 59/328 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+ R   + D L  LL +   +    +  N     I ++   +  RAR   
Sbjct: 134 PT--GPLHVGHGRQAALGDALASLLEWQGHKVHREFYYNDAGVQIHNLAVSVQARARGFK 191

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP-QMIYLIQNIILHGHAY 146
           P        +            D      +  +     T     + +  I+        Y
Sbjct: 192 PG-DAGWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGARDVENLEAIRRFA---VTY 247

Query: 147 ---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
              E + ++        +Y   S    D + +          K    D  LW R+T    
Sbjct: 248 LRNEQDIDLQAFGVKFDHYYLESSLYADGKVQQTVDALIDAGKTYEQDGALWLRTTDDGD 307

Query: 203 GWESPWGR--GRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSCCADRI 258
             +    +  G   + +   A  +   G+ F   I+  G D    HH   IA+     + 
Sbjct: 308 DKDRVMRKSDGSYTYFVPDVAYHTTKWGRGFTQVINVQGSD----HH-GTIARVRAGLQG 362

Query: 259 ------EKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGRSWPA---- 304
                 +   +  +H   + +  +G   K+SK  G+++T+ +L+E       S       
Sbjct: 363 LGLGIPKGYPDYVLHK-MVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTI 421

Query: 305 -------------------PVIRLAMLM 313
                                +R  +L 
Sbjct: 422 RACVESGVPSWPERFTRGRDAVRFFLLS 449


>gi|297380215|gb|ADI35102.1| methionyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 653

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCTISKAD 139


>gi|240079964|ref|ZP_04724507.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268596104|ref|ZP_06130271.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268549892|gb|EEZ44911.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|209881209|ref|XP_002142043.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
 gi|209557649|gb|EEA07694.1| methionyl-tRNA synthetase family protein [Cryptosporidium muris
           RN66]
          Length = 556

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 28/134 (20%)

Query: 29  YVCGP-------TVYDF----AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
           Y CG        T  ++     HIG+A  +IV D + R+ R +           +T  D+
Sbjct: 24  YNCGLNKPFYLTTAINYINGVPHIGHAYEIIVSDAIVRIARIFGYNTRF-----MTGTDE 78

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQM 132
             ++ A     +   N     +   N  +F +   +L         R T+        ++
Sbjct: 79  HGLKNA---TVASNNNMTPKELCDLNVIKFKEMNKKLNIST-DRFIRTTDKDHYKACEEI 134

Query: 133 IYLIQNIILHGHAY 146
               +  +  G  Y
Sbjct: 135 W---KRCMDSGDIY 145


>gi|33596363|ref|NP_884006.1| leucyl-tRNA synthetase [Bordetella parapertussis 12822]
 gi|48428536|sp|Q7W9M4|SYL_BORPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33566132|emb|CAE37032.1| leucyl-tRNA synthetase [Bordetella parapertussis]
          Length = 885

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 17/143 (11%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + D++ R LR       +          D
Sbjct: 33  PDGSEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------D 86

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLI 136
                A  E+ +I      +  T  N     K    +         R      P+     
Sbjct: 87  AFGMPA--ENAAIKSKVPPAKWTYDNIAYMKKQMKAMGL--AIDWSREMCACDPKYYKWN 142

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 143 QWLFLKMLEKGIAYRKTQVVNWD 165


>gi|16800837|ref|NP_471105.1| leucyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|29336554|sp|Q92AZ9|SYL_LISIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16414256|emb|CAC97000.1| leucyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 803

 Score = 41.4 bits (96), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +RL  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRLYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  A   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGARKFLDRIWRLLVTEEGTLAEKV 644


>gi|289580919|ref|YP_003479385.1| valyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530472|gb|ADD04823.1| valyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 896

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 32/96 (33%), Gaps = 7/96 (7%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                      I+   L+    KMSKS GN +  +E+L         +P   +R      
Sbjct: 537 HTGEVPFDATMINGHVLDENREKMSKSKGNIVAPDEVLA-------EYPVDAVRFWAASA 589

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
              +   +  + L   E LL K    S     + PA
Sbjct: 590 AVGDDFPYQEKDLRAGEKLLRKLWNASKLVDTLAPA 625


>gi|194097685|ref|YP_002000725.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|254782423|sp|B4RPY6|SYI_NEIG2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|193932975|gb|ACF28799.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|114778439|ref|ZP_01453284.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
 gi|114551283|gb|EAU53841.1| Leucyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
          Length = 818

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 40/127 (31%), Gaps = 19/127 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+ R   + D + R  R               ++   I   A     E+ +
Sbjct: 42  PYPSGNLHMGHVRNYCLGDAVARYKRMKGY-----------NVLHPIGWDAFGLPAENAA 90

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYLIQNIILHGHA 145
           I  N   +  T  N  Q      RL       +  AT H      +       ++  G A
Sbjct: 91  IKHNRPPAEWTYANIDQMRVQLKRLGLSYDWSREIATCHPDYYRWEQWMFT-RLMQKGLA 149

Query: 146 YEANNEI 152
           Y+ + E+
Sbjct: 150 YQQDAEV 156


>gi|67458501|ref|YP_246125.1| arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75537032|sp|Q4UN98|SYR_RICFE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|67004034|gb|AAY60960.1| Arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 576

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVN 164


>gi|197099534|ref|NP_001127239.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Pongo
           abelii]
 gi|75070896|sp|Q5RDP4|SYLM_PONAB RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|55726702|emb|CAH90113.1| hypothetical protein [Pongo abelii]
          Length = 903

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ ++  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAVERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|33602351|ref|NP_889911.1| leucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
 gi|48428537|sp|Q7WH33|SYL_BORBR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33576790|emb|CAE33869.1| leucyl-tRNA synthetase [Bordetella bronchiseptica RB50]
          Length = 885

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 17/143 (11%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + D++ R LR       +          D
Sbjct: 33  PDGSEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------D 86

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLI 136
                A  E+ +I      +  T  N     K    +         R      P+     
Sbjct: 87  AFGMPA--ENAAIKSKVPPAKWTYDNIAYMKKQMKAMGL--AIDWSREMCACDPKYYKWN 142

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 143 QWLFLKMLEKGIAYRKTQVVNWD 165


>gi|313664963|ref|YP_004046834.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949209|gb|ADR23805.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 509

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 18/137 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+A    + D+L R  +    E        +T  D+      + E+ +   N      
Sbjct: 19  HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEH---GQKIENKAKEANLTPLEY 70

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII----LHGHAYEANNEIIFD 155
            +   Q F     +L         R T+        +Q I       G+ Y+   E I+ 
Sbjct: 71  LNPKVQTFKDLWAKLNINY-DKFIRTTD--DYHEEAVQKIFTILLEKGYIYKGQYEGIYC 127

Query: 156 TSSIPNYGSFSRRKIDE 172
            S        +  +IDE
Sbjct: 128 VSCEE---FLTNEQIDE 141


>gi|307707036|ref|ZP_07643833.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617562|gb|EFN96732.1| isoleucyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 930

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--- 367
                   +  ++  L++      K   T           L A  +D N +  A+     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFNPSQDAVAYEEL 674

Query: 368 -------------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                        L K  R++  + + L I+ A  + + +++   +L+
Sbjct: 675 RSVDKYMTIRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|240117203|ref|ZP_04731265.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268602893|ref|ZP_06137060.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268587024|gb|EEZ51700.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|240015827|ref|ZP_04722367.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|213407330|ref|XP_002174436.1| glutamate-tRNA ligase [Schizosaccharomyces japonicus yFS275]
 gi|212002483|gb|EEB08143.1| glutamate-tRNA ligase [Schizosaccharomyces japonicus yFS275]
          Length = 717

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 40/120 (33%), Gaps = 27/120 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  +       L +Y+  +     +    D +    +           
Sbjct: 213 PEPSGYLHIGHAKAAL-------LNQYFAKKYHGKLIMRFDDTNPSKEK----------- 254

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
                   S+  +  V+D   L    P      ++++  +     ++I  GHAY  +  +
Sbjct: 255 --------SEYQESIVEDVALLGIK-PDVLTYTSDYLDTIYQYCIDVIKAGHAYADDTPV 305


>gi|218231357|ref|YP_002367277.1| lysyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218159314|gb|ACK59306.1| lysine--tRNA ligase [Bacillus cereus B4264]
          Length = 517

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 51/327 (15%), Positives = 88/327 (26%), Gaps = 60/327 (18%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    +     P   I D     +       ++F K               
Sbjct: 69  RFRKVPQNIDPSFAK-YIGMPYCDIPDPYGCYNSYAEHFEKEFEKSLQAFGIEVEFIYQH 127

Query: 124 ---RATNHIPQMIYL---------IQNIILHGHAYEANN-EIIFDTSSIPNYGS----FS 166
              R+  +   ++           I      G   E         T      G      +
Sbjct: 128 DEYRSGRYNENILEALYKRKEIYDILMDFKTGECSEKERESFYPATLYCERCGKDTTTIT 187

Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
                 + +         K+          +  M+  W+  W      W IE        
Sbjct: 188 HFNEVLKIVRYECECGNEKELSVL-----NTNKMKLNWKIDWPMR---WMIEDVVFEP-- 237

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGN 284
                    GG D         +++          A  ++   F+ ++G   KMS S+GN
Sbjct: 238 ---------GGRDHSSETGSYNVSKEIARKIFNCEAPHYVAYDFIGIKGNHEKMSSSSGN 288

Query: 285 FITINELLETKKFGGRSWPAPVIRLAM 311
            IT ++LL       + +   VI    
Sbjct: 289 SITPSDLL-------KVYIPEVILFMF 308


>gi|119872747|ref|YP_930754.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166231635|sp|A1RTX9|SYL_PYRIL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119674155|gb|ABL88411.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 945

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 57/150 (38%), Gaps = 27/150 (18%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DLI  H    I         EK     + NG++  EG KMSKS  N + ++  +E  
Sbjct: 597 SGKDLIPNHLTFFIFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVLPLDRAVEM- 655

Query: 296 KFGGRSWPAPVIRLAM-LMTHYREPIDF-------TVQRLTEAEILLSKWPQTSTSK--G 345
                 +    +R  + L     + +DF         Q+L     L+ +  Q + ++  G
Sbjct: 656 ------YGPDPLRATLALAAEVEQDLDFRDAEARRNAQQLMAIYTLVQRLIQNAENRPAG 709

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARES 375
            ID  +++           I  +   ARE+
Sbjct: 710 WIDQWLIAE----------ISRILDKAREA 729



 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 28/75 (37%), Gaps = 5/75 (6%)

Query: 13 RKITEFQA-IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
          ++   F+    P   + ++     Y     HIG+ R  ++ DVL R  R+    + V Y 
Sbjct: 20 KESRVFEPEPTPGVAKYFITAAYPYPNGAVHIGHGRTYLIADVLARFYRHMG--RVVLYP 77

Query: 70 RNITDIDDKIIERAR 84
                   I+  A 
Sbjct: 78 MGFHYTGTPILTIAE 92


>gi|113955156|ref|YP_730582.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123132569|sp|Q0IAE0|SYL_SYNS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|113882507|gb|ABI47465.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 867

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 26/159 (16%), Positives = 45/159 (28%), Gaps = 18/159 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R  ++ DV+ R+ R       V +              A      I       + 
Sbjct: 64  HMGHVRNYVITDVIARVQRMRG--DAVLHPMGWDAFGLPAENAA------IERKIEPGVW 115

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-IF 154
           T  N  Q      RL       +  AT H        Q     +   G AY+ +  +   
Sbjct: 116 TDSNIAQMRGQLGRLGLSIDWDREVATCH-SDYYRWTQWLFLELHAGGLAYQKDATVNWD 174

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
                      +  ++D      R      K++   + L
Sbjct: 175 PVDQT----VLANEQVDADGRSWRSGALVEKRDLRQWFL 209


>gi|148237378|ref|NP_001085563.1| leucyl-tRNA synthetase 2, mitochondrial [Xenopus laevis]
 gi|49115146|gb|AAH72935.1| MGC80460 protein [Xenopus laevis]
          Length = 900

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 54/187 (28%), Gaps = 29/187 (15%)

Query: 13  RKITEFQAI---DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           R   +F AI   D S  + YV     Y     H+G+ R   + D + R  +         
Sbjct: 62  RVKEQFTAISEVDKSKSKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG-----M 116

Query: 68  YVRNITDID--DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPR 124
            V N    D      E A  EH            T +N +   +   R+  C     +  
Sbjct: 117 QVINPMGWDAFGLPAENAAIEH-----GLRPDTWTERNIKHMREQLERIGLCFNWDREI- 170

Query: 125 ATNHIPQMIYLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            T          Q     +   G AY+    +              +  ++DE     R 
Sbjct: 171 -TTCSEDYYKWTQYLFLKMYEAGLAYQKEAMVNWDPVDQT----VLANEQVDENGCSWRS 225

Query: 180 PEKYHKK 186
             K  +K
Sbjct: 226 GAKVEQK 232


>gi|33593067|ref|NP_880711.1| leucyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|48428535|sp|Q7VWY7|SYL_BORPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33563442|emb|CAE42323.1| leucyl-tRNA synthetase [Bordetella pertussis Tohama I]
 gi|332382479|gb|AEE67326.1| leucyl-tRNA synthetase [Bordetella pertussis CS]
          Length = 885

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 17/143 (11%)

Query: 20  AIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
                  + Y C    Y     H+G+ R   + D++ R LR       +          D
Sbjct: 33  PDGSEKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------D 86

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI-PQMIYLI 136
                A  E+ +I      +  T  N     K    +         R      P+     
Sbjct: 87  AFGMPA--ENAAIKSKVPPAKWTYDNIAYMKKQMKAMGL--AIDWSREMCACDPKYYKWN 142

Query: 137 Q----NIILHGHAYEANNEIIFD 155
           Q     ++  G AY     + +D
Sbjct: 143 QWLFLKMLEKGIAYRKTQVVNWD 165


>gi|15679374|ref|NP_276491.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334357|sp|O27428|SYI_METTH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2622484|gb|AAB85852.1| isoleucyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 1044

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A        + +H   L+ EGRKMSKS GN +   +++E        + A V+R  +L
Sbjct: 569 ALDEVPYRRVLMHGFTLDEEGRKMSKSLGNVVEPEDVIE-------KYGADVLRFYLL 619


>gi|293397732|ref|ZP_06641938.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|291611678|gb|EFF40747.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|239998201|ref|ZP_04718125.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268594054|ref|ZP_06128221.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268547443|gb|EEZ42861.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|317163487|gb|ADV07028.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|238761088|ref|ZP_04622065.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238761341|ref|ZP_04622317.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238700315|gb|EEP93056.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
 gi|238700568|gb|EEP93308.1| Methionyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
          Length = 415

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 30  HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 86

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 87  ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 138

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L + L +    +     A      ++      A   I+ + +V   ++++  
Sbjct: 139 ISKRFAGKLADHLASPELYKTFTDAAVSIADAYNSRESSKAIREIMALADVANRYVDEQA 198

Query: 406 SIAIEK 411
              + K
Sbjct: 199 PWVVAK 204


>gi|229494943|ref|ZP_04388694.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
 gi|229318167|gb|EEN84037.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
          Length = 532

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 37/130 (28%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R    E    +    TD         + +  +I    
Sbjct: 35  PNGAPHIGHAYEYISSDALARFKRLDGHE---VFFMTGTD-----EHGLKMQQTAIKEGI 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGHAYEANNEI 152
            +  + ++N+  F      L         R T+   Q+      + +   G  Y      
Sbjct: 87  DVRELAARNSDVFQNLDKVLNISY-DRFIRTTDADHQVASKAIWEKMAASGDIYLDTYSG 145

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 146 WYSVRDEAFY 155



 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 25/145 (17%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------TH 315
            +++H GFL  +G KMSKS GN +    +++        +    +R  +L          
Sbjct: 309 RVFVH-GFLYNKGEKMSKSVGNVVDPIAMVD-------QYGLDAVRFFLLREISYGQDGS 360

Query: 316 Y-------REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
           Y       R   D + +    A+  L+   +   ++            +DL  +++  AL
Sbjct: 361 YSHEAIVTRMNADLSNELGNLAQRSLTMVAKNCDAQVPTPGEFTE---DDLAMLASADAL 417

Query: 369 HKLARESTKNHDLLPIFNASAHILG 393
               R       L     A   +LG
Sbjct: 418 LAKCRSEFDVQALHLALEAIWGVLG 442


>gi|119469304|ref|ZP_01612243.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7]
 gi|119447168|gb|EAW28437.1| methionyl-tRNA synthetase [Alteromonadales bacterium TW-7]
          Length = 673

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A   + T N++ H GF+ + G KMSKS G FI     L+
Sbjct: 288 HFIGKDIIYFHSLFWPAMLEGAKFRKPT-NVFAH-GFVTVNGEKMSKSKGTFIKARTYLD 345

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 346 NLN-------PEYLRYY 355


>gi|120602858|ref|YP_967258.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
 gi|166232782|sp|A1VEG5|SYR_DESVV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|120563087|gb|ABM28831.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
          Length = 551

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 101/322 (31%), Gaps = 54/322 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   V D L R++R+   +    Y  N      +++  +         
Sbjct: 127 PT--GPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYINDAGRQMRLLGLSVWVRAKELA 184

Query: 93  NDAISIITSKNTQQFVKDTTR---------LACLAPTHQPRATNH-IPQMIYLIQNIILH 142
              +++        ++KD  R         L       + R   + +  ++  I+  +  
Sbjct: 185 GRPVTLPEDFYRGDYIKDIARELMEKEPGLLDLDDAAGEDRCFAYAMNSILDGIKQDLAD 244

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
              +   +++ F   S+   G+        +K   R+ E        D  LW R+T    
Sbjct: 245 ---FRVEHQVWFSERSLVEGGAV-------EKTFNRLKE-AGLAFEQDGALWFRTTDFGD 293

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF---------PHHEN--EIAQ 251
             +    +         S  +  Y       H    D  F          HH     +  
Sbjct: 294 DKDRVLRK---------SDGTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPRMRA 344

Query: 252 SCCADRIEKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           +  A   +  A   +    +NL   G    MS   G F T+ +++       +   A   
Sbjct: 345 AVAALGRKPEAFDVVLIQLVNLLRGGELVAMSTRAGQFETLADVV-------KETGADAA 397

Query: 308 RLAMLMTHYREPIDFTVQRLTE 329
           R   L      P+DF ++ + +
Sbjct: 398 RFMFLSRKSDSPLDFDLELVKQ 419


>gi|71906214|ref|YP_283801.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|123760643|sp|Q47IK0|SYM_DECAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71845835|gb|AAZ45331.1| methionyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 696

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 63/170 (37%), Gaps = 21/170 (12%)

Query: 234 HGGGLDLIFPHH---ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H  G D+++ H      E+A +      +  A+     GFL ++G KMSKS G FIT   
Sbjct: 295 HFIGKDILYFHALFWPAELAHAGFRTPTKIFAH-----GFLTVDGAKMSKSRGTFITAES 349

Query: 291 LLETKKFGGRSWPAPVIRLAM---LMTHYREPIDFTVQRLTEAEI--LLSKWPQ-TSTSK 344
            L+T            +R      L     E ID ++          L+ K+    S S 
Sbjct: 350 FLKT------GLNPEWLRYYYAAKLSAT-MEDIDLSLDDFVARVNSDLVGKYVNIASRSA 402

Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
           G I       L      + AI+ + + A    + ++      A   I+ +
Sbjct: 403 GFITKRFNGQLAPATAELPAIKGIQEAASRIAELYEAREFGKAMREIMAL 452


>gi|59800532|ref|YP_207244.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|240122757|ref|ZP_04735713.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268681358|ref|ZP_06148220.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|81311263|sp|Q5FAF5|SYI_NEIG1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|59717427|gb|AAW88832.1| putative isoleucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|268621642|gb|EEZ54042.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|27375738|ref|NP_767267.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
 gi|32171529|sp|Q89WQ1|SYL_BRAJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27348876|dbj|BAC45892.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 14/83 (16%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAE 331
            KMSKS  N +  ++++ET       + A V R  ML      P D    ++ +R+  A 
Sbjct: 629 EKMSKSKKNTVDPDDIIET-------YGADVARWFMLS---DSPPDRDVIWSDERVQGAS 678

Query: 332 ILLSKWPQTSTSKGIIDPAVLSA 354
             + +  +       +  A  +A
Sbjct: 679 RFVQRLWRLVNDSVELGKAAPAA 701


>gi|289581414|ref|YP_003479880.1| isoleucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289530967|gb|ADD05318.1| isoleucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 1070

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 61/183 (33%), Gaps = 23/183 (12%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H   L  +GR MSKS    +  +E ++            V+R  +L 
Sbjct: 582 AALGDIPYEEVLMHGHALMPDGRAMSKSKDILVDPHEAIDRHGR-------DVMRAFLLS 634

Query: 314 THYR-EPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
            + + + + F+ + +   E  L       ++P         DP           TV  +Q
Sbjct: 635 NNPQGDDMRFSWEGMQTMENHLRTLWNVFRFPLPYMRLDEFDPQAT--------TVEDVQ 686

Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
           A  +L  E      L    +            + LN  I   +E + +  +  ++ + + 
Sbjct: 687 ADLELIDEWVLAR-LQSTKDEMTAHFDERRQDKALNALIDFVVEDVSRFYVQAVRERMWE 745

Query: 427 SAD 429
             D
Sbjct: 746 EED 748


>gi|222085012|ref|YP_002543541.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221722460|gb|ACM25616.1| isoleucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 960

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 56/164 (34%), Gaps = 26/164 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN  +  E+++          A ++RL +
Sbjct: 609 SAATRGRAPYDAVLTHGFTMDEKGEKMSKSKGNVTSPQEVMKDAG-------ADILRLWV 661

Query: 312 LMTHYREPIDFTVQRLT---EAEILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSA- 364
           + + Y E +      +    +A   L    +W   + +    +    + +          
Sbjct: 662 MTSDYAEDLRVGKAIIQTNVDAYRKLRNTIRWMLGTLAHDKGEVIAYADM------PELE 715

Query: 365 ------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                 +  L +L RES    D   I  A      +E+   + +
Sbjct: 716 QLMLHRLAELDELVRESYDAFDFKRIARALIDFSNVELSAFYFD 759


>gi|157878078|pdb|1H3N|A Chain A, Leucyl-Trna Synthetase From Thermus Thermophilus Complexed
           With A Sulphamoyl Analogue Of Leucyl-Adenylate
          Length = 820

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/165 (15%), Positives = 44/165 (26%), Gaps = 16/165 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ +   + DVL R  R    E  V +              A      +  
Sbjct: 42  PYPSGDLHMGHLKNYTMGDVLARFRRMQGYE--VLHPMGWDAFGLPAENAA------LKF 93

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
                  T  N +Q  +    +  L        T   P+     Q     +   G AY A
Sbjct: 94  GVHPKDWTYANIRQAKESLRLMGILY-DWDREVTTCEPEYYRWNQWIFLKMWEKGLAYRA 152

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              ++            +  ++ E +          K+    + L
Sbjct: 153 KG-LVNWCPKCQT--VLANEQVVEGRCWRHEDTPVEKRELEQWYL 194


>gi|37525501|ref|NP_928845.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|68565992|sp|Q7N6J6|SYM_PHOLL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|36784929|emb|CAE13847.1| methionyl-tRNA synthetase [Photorhabdus luminescens subsp.
           laumondii TTO1]
          Length = 675

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFVH-GYVTVNGAKMSKSRGTFIKASTYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                     A  +R      L    R + ID  ++   +      ++K     S + G 
Sbjct: 349 -------HLDADCLRYYYAAKLSA--RIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  Q     A+   +  +      A   I+ + ++   ++++  
Sbjct: 400 INKRFNGKLADKLADPALYQQFIDGAKVIAEEFNNREFSKAIREIMALADLANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|37523220|ref|NP_926597.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|81708786|sp|Q7NF75|SYI_GLOVI RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|35214223|dbj|BAC91592.1| isoleucyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 983

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 47/142 (33%), Gaps = 15/142 (10%)

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
            W    GR RP  H               D++  G D      ++ +      +      
Sbjct: 588 SWAGVLGR-RPELH------------YPADVYLEGSDQHRGWFQSSLLTCVATEGTAPYK 634

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPI 320
            +  H   L+  GRKMSKS GN +    +++      +   + A V+RL +    Y    
Sbjct: 635 TVITHGFTLDEHGRKMSKSLGNVVDPKLVIDGGANQKQHPAYGADVLRLWVASVDYTSDQ 694

Query: 321 DFTVQRLTEAEILLSKWPQTST 342
                 L +   +  K   T+ 
Sbjct: 695 LVGPSVLAQIAEVYRKIRNTAR 716


>gi|294083928|ref|YP_003550685.1| methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292663500|gb|ADE38601.1| Methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 516

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 9/93 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   +  DV+ R  R    E     V+ +T  D+      + E  +     
Sbjct: 15  VNDKPHIGHAYTTLACDVMARFKRLDGFE-----VKFLTGTDEH---GQKVEKAAQVAGT 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +    T+  +Q F   TT+L         R T 
Sbjct: 67  SPQEFTNAVSQNFRDLTTQLNFSNDDF-IRTTE 98


>gi|293364008|ref|ZP_06610744.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
 gi|292552498|gb|EFF41272.1| leucine--tRNA ligase [Mycoplasma alligatoris A21JP2]
          Length = 781

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN +   ++++       ++ A V RL +L      
Sbjct: 525 EPFNNL-LTQGMVLKDGAKMSKSKGNVVIPTDMID-------AYGADVTRLFILFAAPPV 576

Query: 318 EPIDFTVQRLTEAEILLSKW 337
           + ++++   +      + + 
Sbjct: 577 KELEWSDSGILGCFKFVKRL 596


>gi|254492977|ref|ZP_05106148.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|226512017|gb|EEH61362.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
          Length = 929

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|210623269|ref|ZP_03293686.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
 gi|210153670|gb|EEA84676.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
          Length = 644

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 41/143 (28%), Gaps = 19/143 (13%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIG+    +  D + R  R+   +  V ++    +  +KI ++
Sbjct: 3   KPTFYVTTPIYYPSGKLHIGHTYTTVAADAIARFKRFCGYD--VKFLTGTDEHGEKIQKK 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQN 138
           A++                           +L           +PR T  I ++      
Sbjct: 61  AKE------AGMTEIEYLDGMIADIKALWKKLDISYDDFIRTTEPRHTEIIQKIFT---K 111

Query: 139 IILHGHAYEA--NNEIIFDTSSI 159
           +   G  Y+            S 
Sbjct: 112 LYEQGDIYKGTYEGRYCTPCESF 134


>gi|218231128|ref|YP_002369842.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
 gi|226695274|sp|B7HD62|SYM_BACC4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218159085|gb|ACK59077.1| putative methionyl-tRNA synthetase [Bacillus cereus B4264]
          Length = 544

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRDLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|158422191|ref|YP_001523483.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
 gi|172048039|sp|A8IMK0|SYL_AZOC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158329080|dbj|BAF86565.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
          Length = 874

 Score = 41.4 bits (96), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      HIG+ R  ++ DVL R  R       V +              A      I  
Sbjct: 43  PYPSGRIHIGHGRNYVMGDVLARYKRMQGFN--VLHPMGWDSFGLPAENAA------IER 94

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
                  T +N     +    L      ++  AT   ++  +   L  ++  +  AY   
Sbjct: 95  GIHPKSWTYENIASMKEQLQLLGLSLDWNREVATCDPSYYAEQQRLFLDLFENDLAYRKE 154

Query: 150 NEIIFD 155
           +E+ +D
Sbjct: 155 SEVNWD 160


>gi|296474707|gb|DAA16822.1| leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 617

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ +I  N      T  N +   K   +L  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAIERNLHPESWTQSNIRHMRKQLDQLGLCFSWDRE--VTTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|288932340|ref|YP_003436400.1| lysyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894588|gb|ADC66125.1| lysyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 491

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 32/118 (27%), Gaps = 20/118 (16%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER--------- 82
           G T     H GN R +I+ D + R +    G+  V YV    D  D +  R         
Sbjct: 24  GITPSGHIHFGNLREIIIADAVRRAVEEKGGKAEVIYV---ADTFDPLRRRYPFLPEEFE 80

Query: 83  ----ARQEHPSIPINDAISIITSKNTQQFVKDTTRLA----CLAPTHQPRATNHIPQM 132
                       P             Q F++    L             ++  +   +
Sbjct: 81  KYVGMPLSEIPDPEGGCHENYAEHFLQPFLESLDVLGIDLIVKRADQMYKSGEYEKHI 138


>gi|240127458|ref|ZP_04740119.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268685835|ref|ZP_06152697.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268626119|gb|EEZ58519.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|240124950|ref|ZP_04737836.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268683529|ref|ZP_06150391.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|268623813|gb|EEZ56213.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|240114919|ref|ZP_04728981.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268600576|ref|ZP_06134743.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584707|gb|EEZ49383.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|240112173|ref|ZP_04726663.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268598230|ref|ZP_06132397.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268582361|gb|EEZ47037.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|260946053|ref|XP_002617324.1| hypothetical protein CLUG_02768 [Clavispora lusitaniae ATCC 42720]
 gi|238849178|gb|EEQ38642.1| hypothetical protein CLUG_02768 [Clavispora lusitaniae ATCC 42720]
          Length = 955

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 53/182 (29%), Gaps = 34/182 (18%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           K   F  +      M+   P      H+G+ R   + DVL R  R               
Sbjct: 90  KAEPFFCL-----TMF---PYPSGNLHLGHQRVFTISDVLARFKRLQGF----------- 130

Query: 74  DIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI- 129
           D+   +   A     E+ ++      +  T +N  +  +       LA     R  N   
Sbjct: 131 DVIHPMGWDAFGLPAENAAVERGVNPATWTKQNIAKMKEQMHA--MLADFDWEREVNTCS 188

Query: 130 PQMIYLIQNI----ILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           P+     Q I      HG AY    EI              +  ++D +    R      
Sbjct: 189 PEYYRWTQKIFTLLFEHGLAYRMGAEINWDPVDQT----VLANEQVDSEGRSWRSGAIVE 244

Query: 185 KK 186
           KK
Sbjct: 245 KK 246


>gi|238619786|ref|YP_002914612.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|238380856|gb|ACR41944.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
 gi|323474679|gb|ADX85285.1| arginyl-tRNA synthetase [Sulfolobus islandicus REY15A]
 gi|323477413|gb|ADX82651.1| arginyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
          Length = 625

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 31/167 (18%)

Query: 257 RIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP--------- 305
              + A   +H   G +N++G +MS   G  ITI+E+ E      R+             
Sbjct: 412 GYSRFAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENID 471

Query: 306 -----VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--PQTSTSKGIIDPAVLS-ALYN 357
                 +R A+L     +P+ F + R+T  E     +     + +  I+  +  + ++  
Sbjct: 472 DIANAALRYAILSVSANKPLSFDLNRITSFEQNSGPYLQYTYARAANILAKSTENLSMDK 531

Query: 358 -DL--------NTVSAIQ---ALHKLARESTKNHDLLPIFNASAHIL 392
            D         N +  I     + K A ++ +  DL+      + I 
Sbjct: 532 VDFSDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIF 578


>gi|238028342|ref|YP_002912573.1| methionyl-tRNA synthetase [Burkholderia glumae BGR1]
 gi|237877536|gb|ACR29869.1| Methionyl-tRNA synthetase [Burkholderia glumae BGR1]
          Length = 718

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 37/95 (38%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
                        +R           ++ T++ L 
Sbjct: 365 A------GLNPEWLRYYFAAK-----LNATMEDLD 388


>gi|261401844|ref|ZP_05987969.1| isoleucine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269208001|gb|EEZ74456.1| isoleucine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|261378296|ref|ZP_05982869.1| isoleucine--tRNA ligase [Neisseria cinerea ATCC 14685]
 gi|269145390|gb|EEZ71808.1| isoleucine--tRNA ligase [Neisseria cinerea ATCC 14685]
          Length = 930

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 596 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 648

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 649 LKRVTESYRRIRNTLS--------FLFANLSDFN 674


>gi|190571604|ref|YP_001975962.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019007|ref|ZP_03334814.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|238065093|sp|B3CNF3|SYR_WOLPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|190357876|emb|CAQ55335.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995116|gb|EEB55757.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 566

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 42/153 (27%), Gaps = 40/153 (26%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKI------IERAR 84
           PT     HIG+AR  +  DVL  LL+         Y  N     ID  I       + A 
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGYNVTKEYYINDAGAQIDTLIRSVYLRYKEAL 188

Query: 85  QEHPSIPINDAISI--------ITSKN------------TQQF---------VKDTTRLA 115
            E  SI                +  K              +++          +D + L 
Sbjct: 189 GEKISIEKGLYPGEYLKPIGEGLAKKYGKELRAEEDNQIIREYTLSSILELIKEDMSLLG 248

Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
                          ++   I+ +   G  YE 
Sbjct: 249 VNH-DVFTSEYELRGKIEESIKILSDKGLVYEG 280


>gi|229582117|ref|YP_002840516.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
 gi|228012833|gb|ACP48594.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
          Length = 625

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 31/167 (18%)

Query: 257 RIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP--------- 305
              + A   +H   G +N++G +MS   G  ITI+E+ E      R+             
Sbjct: 412 GYSRFAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENID 471

Query: 306 -----VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--PQTSTSKGIIDPAVLS-ALYN 357
                 +R A+L     +P+ F + R+T  E     +     + +  I+  +  + ++  
Sbjct: 472 DIANAALRYAILSVSANKPLSFDLNRITSFEQNSGPYLQYTYARAANILAKSTENLSMDK 531

Query: 358 -DL--------NTVSAIQ---ALHKLARESTKNHDLLPIFNASAHIL 392
            D         N +  I     + K A ++ +  DL+      + I 
Sbjct: 532 VDFSDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIF 578


>gi|149181484|ref|ZP_01859980.1| leucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148850885|gb|EDL65039.1| leucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 804

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 16/144 (11%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ T         A  +R+  M M   
Sbjct: 557 KEPFQRLFNQGMILGENNEKMSKSKGNVVNPDEIVSTHG-------ADTLRMYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLN-----TVSAIQALHK 370
              + ++   L  +   L + W       G I   V      DL      TV  +    +
Sbjct: 610 EASVAWSENGLDGSRRFLDRVWRLLVDENGNISEKVKDEENKDLEKSYHQTVKKVTEDFE 669

Query: 371 LARESTKNHDLLPIFNAS--AHIL 392
             R +T    ++   N +  A +L
Sbjct: 670 GLRFNTGISQMMVFINDAYKADVL 693


>gi|89900225|ref|YP_522696.1| isoleucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
 gi|89344962|gb|ABD69165.1| Isoleucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
          Length = 975

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 42/121 (34%), Gaps = 7/121 (5%)

Query: 39  AHIGNARPMIVFDVL--YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            H+G+A   I+ D++   R L+         +  +   I++ I ++  ++     +    
Sbjct: 92  IHMGHAVNKILKDMIVKARQLKGMDAAYIPGWDCHGLPIENAIEKKYGRKLARDDMQARS 151

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRAT----NHIPQMIYLIQNIILHGHAYEANNEI 152
               ++      +D  RL  L     P  T    N   ++    + ++  G  Y     +
Sbjct: 152 RAYATEQIDLQREDFKRLGVLGDWDHPYRTMDFKNEADEIRAF-KRVVERGFVYRGLKPV 210

Query: 153 I 153
            
Sbjct: 211 Y 211


>gi|15897753|ref|NP_342358.1| arginyl-tRNA synthetase [Sulfolobus solfataricus P2]
 gi|227830317|ref|YP_002832097.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|229579142|ref|YP_002837540.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284997739|ref|YP_003419506.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
 gi|23822202|sp|Q97ZN1|SYR_SULSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|13814038|gb|AAK41148.1| Arginyl-tRNA synthetase (argS) [Sulfolobus solfataricus P2]
 gi|227456765|gb|ACP35452.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
 gi|228009856|gb|ACP45618.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
 gi|284445634|gb|ADB87136.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
          Length = 625

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 31/167 (18%)

Query: 257 RIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP--------- 305
              + A   +H   G +N++G +MS   G  ITI+E+ E      R+             
Sbjct: 412 GYSRFAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENID 471

Query: 306 -----VIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--PQTSTSKGIIDPAVLS-ALYN 357
                 +R A+L     +P+ F + R+T  E     +     + +  I+  +  + ++  
Sbjct: 472 DIANAALRYAILSVSANKPLSFDLNRITSFEQNSGPYLQYTYARAANILAKSTENLSMDK 531

Query: 358 -DL--------NTVSAIQ---ALHKLARESTKNHDLLPIFNASAHIL 392
            D         N +  I     + K A ++ +  DL+      + I 
Sbjct: 532 VDFSDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIF 578


>gi|315641872|ref|ZP_07896864.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
 gi|315482440|gb|EFU72980.1| leucine--tRNA ligase [Enterococcus italicus DSM 15952]
          Length = 807

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 55/181 (30%), Gaps = 39/181 (21%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 526 PVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLFNQGMILGGNNEKMSKSRG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++         + A  +R+  M M      I ++   L  +   L + W    
Sbjct: 586 NVVNPDDVVT-------QYGADTLRMYEMFMGPLDASIAWSENGLEGSRKFLERVWRLIV 638

Query: 342 TSKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHD 380
             +G +   + + + +                D      NT  AI  +     E+ K   
Sbjct: 639 DEEGKLRDRITT-INDGSLTKVYNQTVKKVTEDYNQLHFNT--AISQMMVFVNEAYKAES 695

Query: 381 L 381
           L
Sbjct: 696 L 696


>gi|309378324|emb|CBX23070.1| isoleucyl-tRNA synthetase [Neisseria lactamica Y92-1009]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|285017717|ref|YP_003375428.1| isoleucyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283472935|emb|CBA15440.1| probable isoleucyl-trna synthetase protein [Xanthomonas
           albilineans]
          Length = 943

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D++        H   ++  GRKMSKS  N I   ++++T         A ++RL +  
Sbjct: 595 ALDQMAPYRQCLTHGFTVDEHGRKMSKSLSNGIEPQDIMKTLG-------ADILRLWIAS 647

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + + L        +   T+ 
Sbjct: 648 ADYSNEMSLSQEILKRNADAYRRLRNTAR 676


>gi|241759700|ref|ZP_04757800.1| isoleucine--tRNA ligase [Neisseria flavescens SK114]
 gi|241319708|gb|EER56104.1| isoleucine--tRNA ligase [Neisseria flavescens SK114]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|262199611|ref|YP_003270820.1| leucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
 gi|262082958|gb|ACY18927.1| leucyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
          Length = 854

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 13/114 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ +  +  DV+ R  R       V +V            +A +E        + + I
Sbjct: 49  HVGHPKGYVATDVVARAKRMMGFN--VLHVMGWDSFGLPTERQAVRE------GRSPAEI 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEAN 149
           T++N  +F +    L       +  AT          Q     +   G AY+A 
Sbjct: 101 TARNVGRFKEQLENLGLSYDWSRELAT-SDEAYYRWTQWIFLKLYEKGLAYQAE 153


>gi|218900185|ref|YP_002448596.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
 gi|226695273|sp|B7INU9|SYM_BACC2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218544443|gb|ACK96837.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 544

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRDLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|121634249|ref|YP_974494.1| isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166229751|sp|A1KS62|SYI_NEIMF RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|120865955|emb|CAM09692.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|325131481|gb|EGC54188.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M6190]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|83594296|ref|YP_428048.1| isoleucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83577210|gb|ABC23761.1| Isoleucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 940

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 15/112 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G K+SKS GN  +  +++ +         A ++RL +
Sbjct: 586 SCGTRGRAPYDAVLTHGFLLDEKGDKLSKSKGNAESPQKVVSSVG-------ADIMRLWV 638

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAV----LSAL 355
           + + Y   I F  + L +      +   T      +    D A     ++A+
Sbjct: 639 VSSDYTGDIRFGPEILKQTTDTYRRLRNTLRFLLGALAGFDKAERIDDIAAM 690


>gi|71405862|ref|XP_805515.1| leucyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70868954|gb|EAN83664.1| leucyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 1076

 Score = 41.0 bits (95), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 9/87 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
                D+     DLI  H    +        D   K       NG + ++  KMSKS GN
Sbjct: 677 FWYPVDLRCSAKDLIQNHLTMFLYTHAAIWPDDTSKWPRAIFANGHIQVDNEKMSKSKGN 736

Query: 285 FITINELLETKKFGGRSWPAPVIRLAM 311
           F+++ E ++        + +   RLA 
Sbjct: 737 FMSLAETIDL-------YGSDATRLAC 756


>gi|325676285|ref|ZP_08155964.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
 gi|325552846|gb|EGD22529.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
          Length = 528

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 39/121 (32%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +        +T  D+  ++    +  +      +  
Sbjct: 32  PHIGHAYEYISSDAIARFKRLDGFDVFF-----LTGTDEHGLK---MQQTAAKEGVDVRD 83

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           + ++N+  F      L         R T  +H+     + + ++  G  Y       +  
Sbjct: 84  LATRNSDVFQAMDKALNISY-DRFIRTTDADHLEASKAIWERMVAAGDIYLDTYSGWYSV 142

Query: 157 S 157
            
Sbjct: 143 R 143


>gi|260441266|ref|ZP_05795082.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291044613|ref|ZP_06570322.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|291011507|gb|EFE03503.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|259481569|tpe|CBF75211.1| TPA: methionyl-tRNA synthetase, putative (AFU_orthologue;
           AFUA_4G07820) [Aspergillus nidulans FGSC A4]
          Length = 569

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   M++ D+L R  R   G+     +    +   KI + A           
Sbjct: 64  VNAAPHVGHLYTMVLADILKRW-RTLTGDNEAQLLTGTDEHGMKIQQAANAAGIDTQAFC 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
             + +T      F             +  R T   H   + Y  + +   G+ Y + +E 
Sbjct: 123 DRNCLT------FKALAEAANVDY-NYFIRTTEPAHKEAVQYFWEMLQHRGYIYTSKHEG 175

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 176 WYSVSDETFY 185


>gi|229823987|ref|ZP_04450056.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
 gi|229786341|gb|EEP22455.1| hypothetical protein GCWU000282_01291 [Catonella morbi ATCC 51271]
          Length = 880

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 49/135 (36%), Gaps = 20/135 (14%)

Query: 214 GWHIECSAMSSHYLGK-----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           GW  E SA    Y         +DI    +  +       + QS          N+ IH 
Sbjct: 463 GWPDEESADFKRYFPNNTLVTGYDILTFWVSRM-------MFQSLEFTGRRPFQNVLIHG 515

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRL 327
              + EGRKMSKS GN +   +++E        +    +R  +       + + F+  ++
Sbjct: 516 LIRDAEGRKMSKSLGNGVDPMDIIE-------QYGVDSLRWFLANGSAPGQDVRFSTDKM 568

Query: 328 TEAEILLSKWPQTST 342
             A   ++K    S 
Sbjct: 569 DAAWNFINKIWNASR 583


>gi|237747567|ref|ZP_04578047.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
 gi|229378929|gb|EEO29020.1| isoleucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
          Length = 968

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 12/116 (10%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I   ++ +T         A ++RL +  T Y   +  + + 
Sbjct: 629 HGFVVDGEGKKMSKSMGNVIAPQKVSDTLG-------ADILRLWVAATDYSGELSISDEI 681

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           L        +   T             A         AI  L ++ R +  +   L
Sbjct: 682 LKRVTEAYRRIRNTLRFLLSNTADFDPAKD-----AVAIDELLEIDRYALASMKSL 732


>gi|156937729|ref|YP_001435525.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
 gi|156566713|gb|ABU82118.1| leucyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
          Length = 845

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 31/84 (36%), Gaps = 7/84 (8%)

Query: 292 LETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEIL----LSKWPQTSTSKGI 346
           +E             +RL +L       P+ F+ + L E +      L +WP      G 
Sbjct: 578 VEGVSVNPFKEDPQALRLYLLTAAKPTSPLKFSEKDLREVQKRIEEILKEWPSGDREAGE 637

Query: 347 IDPAVLSALYNDLNTVSAIQALHK 370
           ++  + SAL   L    A  AL +
Sbjct: 638 LEEWLESALA--LRVQRAEAALEQ 659


>gi|87200859|ref|YP_498116.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|87136540|gb|ABD27282.1| valyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 904

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E + +   +     D+   G D++F        Q     +      +++H      
Sbjct: 500 GWPDEDAPLLKKHYPN--DLLVSGFDILFFWDARMAMQGLHFMKEVPWKKLYLHGLVRAA 557

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +G KMSKS GN +    L++        + A  +R  M
Sbjct: 558 DGAKMSKSKGNVVDPLGLID-------KYGADALRFFM 588


>gi|83769155|dbj|BAE59292.1| unnamed protein product [Aspergillus oryzae]
          Length = 590

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 14/140 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK--IIERARQEHPSIPI 92
           V    H+G+   MI+ D+L R  R   GE     +   TD        +          +
Sbjct: 65  VNAAPHVGHLYTMIIADILKRW-RTLCGETDAQLLTG-TDEHGMKGYSQSKNFHGIDCTV 122

Query: 93  NDAISIITSKN-TQQF-------VKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILH 142
               + + ++  TQ F        +D  + A +   +  R T   H   + Y  + +   
Sbjct: 123 QIQQAALAAEMDTQAFCDMNYKTFEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHR 182

Query: 143 GHAYEANNEIIFDTSSIPNY 162
           G+ Y + +E  +  S    Y
Sbjct: 183 GYIYTSKHEGWYSVSDETFY 202


>gi|284043001|ref|YP_003393341.1| tRNA synthetase class I (M) [Conexibacter woesei DSM 14684]
 gi|283947222|gb|ADB49966.1| tRNA synthetase class I (M) [Conexibacter woesei DSM 14684]
          Length = 727

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 26/93 (27%), Positives = 38/93 (40%), Gaps = 19/93 (20%)

Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
           PH E          + E    + +H   ++L+GRKMSK  GN +  +ELL          
Sbjct: 524 PHIE----------QGEPHERVLMH-EMVHLDGRKMSKHLGNVVDPDELLARVG------ 566

Query: 303 PAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            A  +RLA+L        + +T Q L      L
Sbjct: 567 -ADTVRLAVLYAAAPTNILTWTDQALQYCRRWL 598


>gi|229153227|ref|ZP_04281406.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228630326|gb|EEK86976.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 544

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRDLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|157964131|ref|YP_001498955.1| arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157843907|gb|ABV84408.1| Arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 578

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 130 PT--GPMHIGHARGAVYGDVLARILQKVGYSVTKEYYVN 166


>gi|147801914|emb|CAN70624.1| hypothetical protein VITISV_028586 [Vitis vinifera]
          Length = 318

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 7/46 (15%), Positives = 20/46 (43%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
               + ++   ++ L  +R      + ++ AD +  ++   G+ LE
Sbjct: 154 DPRESASVPGELQILAVQRAKARSERNYAKADALHDKIIDAGYRLE 199


>gi|172058142|ref|YP_001814602.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
 gi|171990663|gb|ACB61585.1| valyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
          Length = 878

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 69/199 (34%), Gaps = 33/199 (16%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ PAD   W++   +   W S   W     GW  E +A    Y      +   G D+I
Sbjct: 430 GKEAPADLENWEQDNDVLDTWFSSALWPFSTMGWPNEGAADYQKYFPTSTLV--TGYDII 487

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
                  I QS          ++ IH    + EGRKMSKS GN I   +++E        
Sbjct: 488 AFWVSRMIFQSYEFTGERPFNDVLIHGLIRDSEGRKMSKSLGNGIDPMDVIE-------K 540

Query: 302 WPAPVIRLAMLMTH--------Y----REPIDFTVQRLTEAEILL---SKWP----QTST 342
           + A  +R  +            Y        +F+ +    +   L    +        S 
Sbjct: 541 YGADSLRWFLTTGSTPGNDLRFYWEKIEATWNFSNKLWNASRFALMNMDRLTHEQIDLSG 600

Query: 343 SKGIIDPAVLSALY---ND 358
            K + D  +L+ L    +D
Sbjct: 601 EKSLADQWILTRLNTTIDD 619


>gi|332284895|ref|YP_004416806.1| leucyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330428848|gb|AEC20182.1| leucyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 885

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 27/206 (13%), Positives = 51/206 (24%), Gaps = 48/206 (23%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + D++ R LR       +          D     
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMMARQLRMRGYNVLMPMGW------DAFGMP 91

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----- 137
           A  E+ +I      +  T  N     K    +              I     +       
Sbjct: 92  A--ENAAIKSQVPPAKWTYDNIAYMKKQMKAMGL-----------AIDWSREMCACDPKY 138

Query: 138 ---------NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
                     ++  G AY     +              +  ++ + +          ++ 
Sbjct: 139 YKWNQWLFLQMLEKGIAYRKTQVVNWDPVDQT----VLANEQVIDGRGWRSGALVEKREI 194

Query: 188 PA------DFI--LWKRSTPMEPGWE 205
           P       D+   L  +     PGW 
Sbjct: 195 PGYYLRITDYAEELLGKVQDGLPGWP 220


>gi|331265790|ref|YP_004325420.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
 gi|326682462|emb|CBZ00079.1| Valyl-tRNA synthetase [Streptococcus oralis Uo5]
          Length = 883

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   +++E  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTDRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|296331993|ref|ZP_06874457.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305675613|ref|YP_003867285.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150764|gb|EFG91649.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413857|gb|ADM38976.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 804

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ +         A  +RL  M M   
Sbjct: 557 KEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W       G ++  ++ 
Sbjct: 610 DASIAWSESGLDGARRFLDRVWRLFVEDSGELNGKIVE 647


>gi|296127077|ref|YP_003634329.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018893|gb|ADG72130.1| leucyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 853

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 44/153 (28%), Gaps = 18/153 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+     + D + R  R    +  + +     D      E A  EH + P        
Sbjct: 47  HMGHVSNYTIADSIARYYRLLGYD--ILHPMGW-DAFGMPAENAAIEHKTHPA-----EW 98

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY----LIQNIILHGHAYEANNEI-IF 154
           T KN     +    L   +       T  +P         I  +   G  Y    ++   
Sbjct: 99  TLKNIANMKEQLNLLG-YSYDWDREVTTCLPDYYKWGQWFILKMYEKGLLYRKGGDVNWC 157

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           D  +       +  ++  +    R   +  KK 
Sbjct: 158 DHCNT----VLANEQVTPEGTCWRCDGEVTKKK 186


>gi|55379735|ref|YP_137585.1| lysyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68052896|sp|Q5UXX4|SYK_HALMA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|55232460|gb|AAV47879.1| lysyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 545

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 40/93 (43%), Gaps = 15/93 (16%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +   +  L+G  +S S+GN IT++E+L+  +         V +   +    R+  DF+V+
Sbjct: 296 MVYEWFTLDGEPLSSSSGNVITVDEVLDILE-------PEVFKYFFVKDP-RKQRDFSVE 347

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
            + +      ++ +    +       + A  +D
Sbjct: 348 NIDQLVDEFDRFERRYFEE-------IEASEDD 373


>gi|145638841|ref|ZP_01794449.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|145271813|gb|EDK11722.1| tellurite resistance protein TehB [Haemophilus influenzae PittII]
 gi|309750825|gb|ADO80809.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2866]
          Length = 682

 Score = 41.0 bits (95), Expect = 0.37,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLDDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|322829489|gb|EFZ32857.1| leucyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 1076

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 33/87 (37%), Gaps = 9/87 (10%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
                D+     DLI  H    +        D   K       NG + ++  KMSKS GN
Sbjct: 677 FWYPVDLRCSAKDLIQNHLTMFLYTHAAIWPDDTSKWPRAIFANGHIQVDNEKMSKSKGN 736

Query: 285 FITINELLETKKFGGRSWPAPVIRLAM 311
           F+++ E ++        + +   RLA 
Sbjct: 737 FMSLAETIDL-------YGSDATRLAC 756


>gi|227326675|ref|ZP_03830699.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 676

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L      +     A    + +       A   I+ + ++   ++++  
Sbjct: 400 INKRFDGKLADKLADAELYKTFTDAATSIAEAYSSRESGRAIREIMALADIANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|222151682|ref|YP_002560838.1| leucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|254782505|sp|B9E7H4|SYL_MACCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|222120807|dbj|BAH18142.1| leucyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 802

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 31/150 (20%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    ++     L     KMSKS GN +  ++++ +         A  +RL  M 
Sbjct: 551 VVHTKEPFQKLFNQGMILGEGNEKMSKSKGNVVNPDDVVASHG-------ADTLRLYEMF 603

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVLS----ALY----------- 356
           M      I ++   L  A   L +  +      G +   +      ++            
Sbjct: 604 MGPLDASIAWSTNGLDGARRFLDRVYRLLVNEDGTLSEKITEQPVGSMEKVYHQTVKKVT 663

Query: 357 ND-----LNTVSAIQALHKLARESTKNHDL 381
           +D      NT  AI  +     E  K+  L
Sbjct: 664 DDYETLGFNT--AISQMMVFINEGYKSEQL 691


>gi|170291002|ref|YP_001737818.1| valyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175082|gb|ACB08135.1| Valyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 775

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 33/87 (37%), Gaps = 8/87 (9%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-TH 315
             +   ++W+    L+ +GR M KS GN I    L E        + A  +R       H
Sbjct: 513 GRQAFKHVWLSGMGLDAQGRAMHKSLGNVIYPWPLFE-------KYGADAVRFFGAAEAH 565

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +  + +++  A   L K    + 
Sbjct: 566 HGSDLRISERKIEGAYKFLQKLWNVAR 592


>gi|15835099|ref|NP_296858.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270285268|ref|ZP_06194662.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
 gi|270289286|ref|ZP_06195588.1| leucyl-tRNA synthetase [Chlamydia muridarum Weiss]
 gi|301336664|ref|ZP_07224866.1| leucyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
 gi|13878791|sp|Q9PKI4|SYL_CHLMU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|7190521|gb|AAF39327.1| leucyl-tRNA synthetase [Chlamydia muridarum Nigg]
          Length = 819

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 26/122 (21%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPID----F 322
              L++   KMSKS  N +    L++        + A  +R  AM       P+D    +
Sbjct: 591 GELLDVRQEKMSKSKLNGVDPKVLID-------EFGADAVRMYAMFSG----PLDKNKLW 639

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           + Q +      L+++ + +TS  + D  +   +             HKL +  T + + L
Sbjct: 640 SNQGVAGCRRFLNRFYEMATSSRVKDEDIFEGM----------SLAHKLVQRVTDDIEKL 689

Query: 383 PI 384
            +
Sbjct: 690 SL 691



 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 44/149 (29%), Gaps = 21/149 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      I         
Sbjct: 48  HVGHLIGYTATDIVARYKRAKGF--SVLHPMGWDSFGLPAEQYA------IRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN   F +  T +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TEKNIANFKQQLTSMGFSYDESREFAT-SDPEYYKWTQKLFLILYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQKMGTRVPEKY 183
            +  P  G+  S    +E + G  V   Y
Sbjct: 155 VNYCPELGTVLSN---EEVENGFSVEGGY 180


>gi|295425123|ref|ZP_06817828.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065182|gb|EFG56085.1| isoleucine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 927

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 569 SVATTGLAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  +   L+++     K   T      +    DP      Y DL +V     
Sbjct: 622 AQADTSSDVAVSYDILSQSAESYRKIRNTFRYMLANTSDFDPEKNRIAYEDLRSVDQYME 681

Query: 368 --LHKLARESTKNHDLLP---IFNASAHILGIEVCKEHLNKNISIA-IEK 411
             L+ L R+    +D      +F    + +  ++   +L+    +  IE 
Sbjct: 682 VKLNDLIRDCLAAYDKYDFSTVFKKVFNFISNDLSSFYLDFAKDVLYIEA 731



 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 34/101 (33%), Gaps = 7/101 (6%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQ 85
           GP   +   H+G+A   I  D++ R                   +  ++ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMDGYYAPYVPGWDTHGLP-VEQQLAKKGVDRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
                   +       K  ++ + D  RL  +A    P  T
Sbjct: 114 TMDRAKYRELCHEYAEKQIKKQMTDFKRLGVMADWDHPYIT 154


>gi|241889685|ref|ZP_04776983.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
 gi|241863307|gb|EER67691.1| isoleucine--tRNA ligase [Gemella haemolysans ATCC 10379]
          Length = 910

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-E 274
           H  C A+    L    D++  G D       + +  S     +     + +  GF+    
Sbjct: 535 HQGCCAIRED-LTYPADLYLEGSDQYRGWFNSSLITSVAVSGVAPYKEL-VSAGFVMDGN 592

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G KMSKS GN I+ N++       G+   A +IRL      Y + +  +   L +     
Sbjct: 593 GNKMSKSLGNVISPNDV-------GKELGAEIIRLWSASVDYTQDVRISKDILKQVSETY 645

Query: 335 SKWPQT 340
            K   T
Sbjct: 646 RKIRNT 651


>gi|164423827|ref|XP_962330.2| hypothetical protein NCU07688 [Neurospora crassa OR74A]
 gi|157070248|gb|EAA33094.2| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 1145

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 7/94 (7%)

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
           A+++ ++ D   +    + I       E L  N++ AIE+L+ ER  L++ K  + AD  
Sbjct: 673 AKKTNESFDARELEE--SAIKEFVQKLERLKHNMTSAIEQLIAERDDLVEEKNQAIADRD 730

Query: 432 R-----KQLESKGFILEDYKNPDNGQRMTRWKQK 460
           R     +QL SK   L D  N    Q   R+KQ+
Sbjct: 731 RALLEFEQLSSKNAQLADMNNDLTHQIQERFKQQ 764


>gi|149728716|ref|XP_001500886.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Equus caballus]
          Length = 903

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ +I  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|90409058|ref|ZP_01217184.1| leucyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90309839|gb|EAS37998.1| leucyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 859

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 22/159 (13%)

Query: 268 NGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           NG + +     KMSKS  N I    +++        + A  +RL M+      + ++++ 
Sbjct: 607 NGQVLIFDGMCKMSKSKNNGIDPQIMID-------KYGADSVRLFMMFAAPAEQTLEWSD 659

Query: 325 QRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHD 380
             L  +   L +  + +      G +D   + +  +      A+ + LHK  ++ T +  
Sbjct: 660 SALEGSLRFLKRLWKLANDHIELGSVDALDIKSQNDG---QKALRRELHKTIKKVTDDIG 716

Query: 381 LLPIFN-ASAHILGI--EVCKEHLNKNISIAI--EKLVQ 414
               FN A A ++ +  ++ K         AI  E LV 
Sbjct: 717 RRQTFNTAIASVMELMNKLLKAPTKNAQDRAILQEALVA 755


>gi|58258053|ref|XP_566439.1| methionine-tRNA ligase [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57222576|gb|AAW40620.1| methionine-tRNA ligase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 582

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 13/151 (8%)

Query: 18  FQAI-DPSNIR-MYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           F    DP+N +  YV  P  Y     H+G+   +++ DVL R  R  + ++ V +     
Sbjct: 41  FTPEGDPANAKPFYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTD 100

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQ 131
           +   KI + A+         +    ++ +  +       +LA  + T   R T   H+  
Sbjct: 101 EHGLKIQQAAKANGVGEQ--EFCDDVSQRFRK-----LAKLANASNTDFIRTTELRHVKA 153

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNY 162
           +      ++  G  Y+  +   +  S    Y
Sbjct: 154 VEQFWNTLVASGDIYKGTHSGWYSISDESFY 184


>gi|21541546|gb|AAM61880.1| putative leucyl-tRNA synthetase [Agrobacterium tumefaciens]
          Length = 778

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 16/113 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLN-LEGRKMSKSNGN 284
           D++ GG++    H       +     +      E    ++ + G +N + GRK SKS GN
Sbjct: 485 DVYIGGIEHATLHLIYSRFITKVLHDLGYIEFDEPFVELY-NQGMVNDVHGRKQSKSLGN 543

Query: 285 FITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK 336
                          + + A  +R   +  T Y  PI++           L +
Sbjct: 544 VT-------DPSVVVQEFGADAVRCYLLFKTTYNAPINWEDSGPQAMRSYLER 589


>gi|39938719|ref|NP_950485.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
 gi|39721828|dbj|BAD04318.1| methionyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
          Length = 520

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 41/99 (41%), Gaps = 10/99 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H                    ++ + ++  +  KMSKS GN + +++L
Sbjct: 259 DMHVIGKDILRFHLIYWPILLMAL--EISLPKQFLTHPWILFDKNKMSKSKGNVLYVDDL 316

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           L       + +P   IR  +L    Y +  + T + L E
Sbjct: 317 L-------KYFPVDSIRYFVLSEIPYAQDGNITYELLVE 348


>gi|75760133|ref|ZP_00740193.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228903536|ref|ZP_04067659.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|74492370|gb|EAO55526.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228856112|gb|EEN00649.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 544

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRDLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|134105975|ref|XP_777998.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260701|gb|EAL23351.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 582

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 57/151 (37%), Gaps = 13/151 (8%)

Query: 18  FQAI-DPSNIR-MYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           F    DP+N +  YV  P  Y     H+G+   +++ DVL R  R  + ++ V +     
Sbjct: 41  FTPEGDPANAKPFYVTTPIFYVNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFATGTD 100

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQ 131
           +   KI + A+         +    ++ +  +       +LA  + T   R T   H+  
Sbjct: 101 EHGLKIQQAAKANGVGEQ--EFCDDVSQRFRK-----LAKLANASNTDFIRTTELRHVKA 153

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNY 162
           +      ++  G  Y+  +   +  S    Y
Sbjct: 154 VEQFWNTLVASGDIYKGTHSGWYSISDESFY 184


>gi|227827629|ref|YP_002829409.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|229584833|ref|YP_002843335.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
 gi|227459425|gb|ACP38111.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
 gi|228019883|gb|ACP55290.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
          Length = 625

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 31/167 (18%)

Query: 257 RIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP--------- 305
              + A   +H   G +N++G +MS   G  ITI+E+ E      R+             
Sbjct: 412 GYSRFAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDNIVRNKLKEKGGNMENID 471

Query: 306 -----VIRLAMLMTHYREPIDFTVQRLTEAE------------ILLSKWPQTSTSKGIID 348
                 +R A+L     +P+ F + R+T  E               +   +++ +  +  
Sbjct: 472 DIANAALRYAILSVSANKPLSFDLNRITSFEQNSGPYLQYTYARAANILAKSTENLSMDK 531

Query: 349 PAVLSALYNDLNTVSAIQ---ALHKLARESTKNHDLLPIFNASAHIL 392
                 + +  N +  I     + K A ++ +  DL+      + I 
Sbjct: 532 VDFSDLVGDKRNILILIAKFPEVFKNAVDNLRLEDLVAFLRELSDIF 578


>gi|167759909|ref|ZP_02432036.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
 gi|167662528|gb|EDS06658.1| hypothetical protein CLOSCI_02273 [Clostridium scindens ATCC 35704]
          Length = 883

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 66/174 (37%), Gaps = 30/174 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              ++IH    + +GRKMSKS GN I   E+
Sbjct: 480 DVLVTGYDIIFFWVIRMVFSGYAHTGKTPFHTVFIHGLVRDSQGRKMSKSLGNGIDPLEI 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTS------- 341
           +E        + A  +R+ ++  +   P   + F  +R+  +    +K    S       
Sbjct: 540 IE-------QYGADALRMTLITGN--APGNDMRFYNERVEASRNFANKVWNASRFIMMNI 590

Query: 342 TSKGIIDPAVLSALYNDLNTVSA----IQALHKLARESTKNHDLLPIFNASAHI 391
             K I +PA       D     A    +   + L ++ T+N D   +  A + I
Sbjct: 591 EDKEITEPA-------DFKLRPADRWIMSKCNNLVKDVTENMDKYELGIALSKI 637


>gi|115402377|ref|XP_001217265.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
 gi|114189111|gb|EAU30811.1| hypothetical protein ATEG_08679 [Aspergillus terreus NIH2624]
          Length = 1519

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 52/161 (32%), Gaps = 36/161 (22%)

Query: 203  GW---ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG---GLDLIFPHHENEIAQSCCAD 256
             W    +P+  G P         +  YL    D H G      L F  H+    QS    
Sbjct: 1084 SWTEVPTPYADGYP---------ADVYLEGT-DQHRGWFQSGLLTFIAHQLAAGQS---T 1130

Query: 257  RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-----------------TKKFGG 299
                  ++  H   L+ EGRKMSKS GN +    +++                  K    
Sbjct: 1131 PRAPFKHLVTHGFTLDEEGRKMSKSIGNVVHPQTIMDGTLLPPLKPKKGKKQQADKGPVY 1190

Query: 300  RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             +     +R+ +  + Y   +    Q L      L K+  T
Sbjct: 1191 DALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVT 1231


>gi|163848307|ref|YP_001636351.1| leucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526220|ref|YP_002570691.1| leucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669596|gb|ABY35962.1| leucyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222450099|gb|ACM54365.1| leucyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 1000

 Score = 41.0 bits (95), Expect = 0.38,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 11/99 (11%)

Query: 20  AIDPSNIRMYVCGPTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
            IDP+  + YV     Y   D   +G+ R  +  DV+ R  R       V +        
Sbjct: 37  PIDPAKPKYYVLDFYPYPSGDGLSVGHCRNYVPTDVVARYYRMRGYN--VLHPMGWDAFG 94

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                 A      I      +++T + +  + +    L 
Sbjct: 95  LPTENAA------IKTKTNPAVLTRRYSANYKRQMNMLG 127


>gi|300870561|ref|YP_003785432.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300688260|gb|ADK30931.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 649

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 11/123 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D+ HIG+    I  D + R  +    +  V ++    +  +KI  +A +           
Sbjct: 17  DYLHIGHCYCTIATDTMARYKKIMGYD--VYFLTGTDEHGEKIQRKAEEAKT------TP 68

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
                       K   RL     +H  R T+  H  ++  + + +   G+ Y+ + + ++
Sbjct: 69  KEYVDNIVDATKKLWKRLHIDY-SHYIRTTDDYHERRVQNIFKQLYDKGYIYKGSYKGLY 127

Query: 155 DTS 157
             S
Sbjct: 128 CVS 130



 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 33/82 (40%), Gaps = 12/82 (14%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
            ++ H   L  +G+KMSKS GN +  N L++        +    +R  ++       I+F
Sbjct: 289 KVFGHGWVLFDDGKKMSKSRGNVVDPNALID-------KYGVDALRYFLMR-----EINF 336

Query: 323 TVQRLTEAEILLSKWPQTSTSK 344
            V      EI L +      + 
Sbjct: 337 GVDGFYSQEIFLKRINSDLAND 358


>gi|229079767|ref|ZP_04212300.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
 gi|228703607|gb|EEL56060.1| Lysyl-tRNA synthetase [Bacillus cereus Rock4-2]
          Length = 517

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 72/465 (15%), Positives = 136/465 (29%), Gaps = 90/465 (19%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQGLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIND---AISIITSKNTQQFVKDTTRLACLAPTHQP- 123
             R +    D    +     P   I D     +       ++F K               
Sbjct: 69  RFRKVPKNIDPSFAK-YIGMPYCDIPDPSGCHNSYAEHFEKEFEKSLQAFGIEVEFIYQY 127

Query: 124 ---RATNHIPQMIYLIQNIILHGHAY-------------EANNEIIFDTSSIPNYGS--F 165
              R+  +   ++     +      Y             E  N+    T      G    
Sbjct: 128 DEYRSGRYNKNILE---ALYKRKEIYDILMDFKTGESSEEERNDFYPATLYCERCGKDTT 184

Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
           +    DE     R   +   +     +    +  M+  W+  W      W IE       
Sbjct: 185 TITHFDEVLKTVRYECECGNEKELSVL---NTNKMKLNWKIDWPMR---WMIEDVIFEP- 237

Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNG 283
                     GG D         +++        + A  ++   F+ ++G   KMS S+G
Sbjct: 238 ----------GGRDHSSETGSYNVSKEIARKIFNREAPHYVAYDFIGIKGNHEKMSSSSG 287

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT---VQRLTEAEILLSKWPQT 340
           N IT ++LL       + +   VI        Y+    F     + +        +   +
Sbjct: 288 NSITPSDLL-------KVYIPEVILFMF--AKYKPGAAFHIGLDEDVIRNYTEYERLKDS 338

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
             +K + +  +  A+              KL++  ++  +  P FN  A  L +      
Sbjct: 339 YENKTLKNEDLFDAI--------------KLSKVDSEFKE-YPKFNQVAGTLPLLNFDST 383

Query: 401 LNKNISIAIE---KLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           + + I   I+    L + R I  + + +     IR     K   +
Sbjct: 384 ILQGILKKIDRSYALDEMRAISNRAEYW-----IRNFQSEKLIAV 423


>gi|254507772|ref|ZP_05119903.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
 gi|219549297|gb|EED26291.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
          Length = 686

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 64/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPDNVFVH-GYVTVNGAKMSKSKGTFIKAATYLD 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L  +       +     A    + ++      A   I  + +   +
Sbjct: 394 SRNAGFITKRFEGKLSANFAEPELYKEFADAADRIAELYETREFGRAIREITALADKANQ 453

Query: 400 HLNKNISIAIEK 411
           ++++     + K
Sbjct: 454 YVDEKAPWVVAK 465


>gi|167585788|ref|ZP_02378176.1| methionyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 724

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 306 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 363

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 364 T------GLNPEWLRYYFAAK-----LNATMEDLD 387


>gi|83746251|ref|ZP_00943304.1| Isoleucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|207742565|ref|YP_002258957.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
 gi|83727001|gb|EAP74126.1| Isoleucyl-tRNA synthetase [Ralstonia solanacearum UW551]
 gi|206593958|emb|CAQ60885.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum IPO1609]
          Length = 959

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I   E+            A +IRL +  T Y   +  + + 
Sbjct: 623 HGFTVDGEGRKMSKSIGNTIAPQEIAGKMG-------AEIIRLWVAATDYSGELAISDEI 675

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 676 LKRVVESYRRIRNT 689


>gi|332283969|ref|YP_004415880.1| isoleucyl-tRNA synthetase [Pusillimonas sp. T7-7]
 gi|330427922|gb|AEC19256.1| isoleucyl-tRNA synthetase [Pusillimonas sp. T7-7]
          Length = 947

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++ +GRKMSKS GN I   ++ +          A ++RL   
Sbjct: 598 CMLYGRPPYKALLTHGFVVDGQGRKMSKSVGNVIAPQKVSDALG-------AEILRLWTA 650

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L        +   T
Sbjct: 651 STDYSGELSISDEILKRVVEGYRRIRNT 678


>gi|330507912|ref|YP_004384340.1| lysyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928720|gb|AEB68522.1| lysyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 499

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 31/99 (31%), Gaps = 15/99 (15%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD------------IDDKI 79
           G T     HIGN R ++  + +YR L     +  + Y+ +  D             ++ I
Sbjct: 24  GITPSGPVHIGNMREVMTAEAVYRALLDRGVQARLIYIADTFDRLRRLYPFLPESFNEHI 83

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            +         P     +         F+K   RL    
Sbjct: 84  GK--PLSQIPCPEGC-CASYADHFLTPFLKSMERLGIKP 119


>gi|312792522|ref|YP_004025445.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312179662|gb|ADQ39832.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 653

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 58/198 (29%), Gaps = 55/198 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A                 +G+L LEG KMSKS GN +     
Sbjct: 255 DVHLVGKEIVRFHTIIWPAMLMAL--GLPLPKTVFGHGWLLLEGGKMSKSKGNVV----- 307

Query: 292 LETKKFGGRSWPAPVIRLAML------MTHYREPIDFTVQRLTE---------------- 329
                   + +    +R  +L         Y     F+ + L                  
Sbjct: 308 --DPVVLAQKYGVDSLRYFLLREIPFGADGY-----FSEEALKNRHNSDLANDLGNLLSR 360

Query: 330 AEILLSKWPQ----TSTSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARES 375
              ++ K+          K  ID  +             L ++    +A+  + KL   +
Sbjct: 361 TVAMIEKYFDGVIYLPEEKEEIDNELKDLAKEVYENVCKLLDEFQFSNALIEIWKLISRA 420

Query: 376 TKNHDLLPIFNASAHILG 393
            K  D          +LG
Sbjct: 421 NKYID-----QTMPWVLG 433


>gi|304388367|ref|ZP_07370478.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337633|gb|EFM03791.1| isoleucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|294627038|ref|ZP_06705628.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598700|gb|EFF42847.1| isoleucyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 926

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             D++        H   ++  GRKMSKS GN I   ++++T         A ++RL +  
Sbjct: 578 AMDKVAPYKQCLTHGFTVDEHGRKMSKSLGNGIEPQDIMKTLG-------ADILRLWIAS 630

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST 342
             Y   +  + +          +   T+ 
Sbjct: 631 ADYSNEMSLSQEIFKRNADAYRRLRNTAR 659


>gi|242238640|ref|YP_002986821.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703]
 gi|242130697|gb|ACS84999.1| methionyl-tRNA synthetase [Dickeya dadantii Ech703]
          Length = 676

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKAETYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFIQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + +   +  Q   + A+     +D      A   I+ + ++   ++++  
Sbjct: 400 INKRFAGKLADHIADPALYQTFIEAAQTIADAYDSRESGKAVREIMALADLANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|239636330|ref|ZP_04677332.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
 gi|239597685|gb|EEQ80180.1| isoleucine--tRNA ligase [Staphylococcus warneri L37603]
          Length = 916

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALEQIEIQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651


>gi|207723591|ref|YP_002253990.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum MolK2]
 gi|206588793|emb|CAQ35756.1| isoleucyl-trna synthetase protein [Ralstonia solanacearum MolK2]
          Length = 959

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EGRKMSKS GN I   E+            A +IRL +  T Y   +  + + 
Sbjct: 623 HGFTVDGEGRKMSKSIGNTIAPQEIAGKMG-------AEIIRLWVAATDYSGELAISDEI 675

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 676 LKRVVESYRRIRNT 689


>gi|171920908|ref|ZP_02932059.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|185178931|ref|ZP_02964692.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188024125|ref|ZP_02996861.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188518253|ref|ZP_03003782.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|188524387|ref|ZP_03004413.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198273760|ref|ZP_03206294.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209554454|ref|YP_002284847.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225550591|ref|ZP_03771540.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225551525|ref|ZP_03772471.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903125|gb|EDT49414.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
           ATCC 33698]
 gi|184209194|gb|EDU06237.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
           ATCC 27817]
 gi|188019182|gb|EDU57222.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
           ATCC 27819]
 gi|188998148|gb|EDU67245.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
           ATCC 33695]
 gi|195659998|gb|EDX53378.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
           ATCC 33696]
 gi|198249515|gb|EDY74297.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
           ATCC 27816]
 gi|209541955|gb|ACI60184.1| isoleucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
           ATCC 33699]
 gi|225379340|gb|EEH01705.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|225379745|gb|EEH02107.1| isoleucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 900

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   L+ EG KMSKS GN +   ++        + + A V+RL +  + Y+     + + 
Sbjct: 583 HGMVLDGEGYKMSKSKGNVVDPLDVC-------KVYGADVLRLWIANSDYQNDTRISEEI 635

Query: 327 LTEAEILLSKWPQT 340
           L +   +  +   T
Sbjct: 636 LKQNAEIYRRIRNT 649


>gi|7661872|ref|NP_056155.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Homo
           sapiens]
 gi|2501029|sp|Q15031|SYLM_HUMAN RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|19683964|gb|AAH25989.1| Leucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|119585144|gb|EAW64740.1| leucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|124126795|gb|ABM92170.1| leucyl-tRNA synthetase 2, mitochondrial [synthetic construct]
 gi|157928010|gb|ABW03301.1| leucyl-tRNA synthetase 2, mitochondrial [synthetic construct]
 gi|168274302|dbj|BAG09571.1| leucyl-tRNA synthetase [synthetic construct]
          Length = 903

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ ++  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|115524873|ref|YP_781784.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
 gi|115518820|gb|ABJ06804.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
          Length = 518

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D L R  R     K V ++    +   K+++ A++E            
Sbjct: 24  PHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGQKMVQTAQKEGL------TPHD 75

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           + ++N  +F +   +L         R T   H      + + ++ +G  Y  +    +  
Sbjct: 76  LATRNAGRFREMDDKLNVSY-DRFIRTTEEQHHRSSQEIWRRMLKNGDIYLDSYAGWYSV 134

Query: 157 SSIPNY 162
                Y
Sbjct: 135 RDEAYY 140


>gi|319409844|emb|CBY90153.1| isoleucyl-tRNA synthetase (isoleucine-tRNA ligase; IleRS)
           [Neisseria meningitidis WUE 2594]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|255320934|ref|ZP_05362108.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262380213|ref|ZP_06073368.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302103|gb|EET81346.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298407|gb|EEY86321.1| leucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 873

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 53/154 (34%), Gaps = 24/154 (15%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 632 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 684

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNHDLLP 383
            L +       + +   +   ID   LSA   DL   T   IQ   K++ +  + H    
Sbjct: 685 FLKRVWRLATGFLEKGNNASNIDKTALSAAAQDLRRKTHETIQ---KVSDDIERRHAFNT 741

Query: 384 IFNASAHILGIEVCKEHLNKNISIA----IEKLV 413
              A   +L      E  + N        I  L+
Sbjct: 742 AIAAMMELLNANNRFEAKDDNDVAVARESIMALL 775


>gi|170733778|ref|YP_001765725.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
 gi|226710897|sp|B1JWS3|SYM_BURCC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|169817020|gb|ACA91603.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
          Length = 716

 Score = 41.0 bits (95), Expect = 0.39,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 64/176 (36%), Gaps = 33/176 (18%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT------EAEI---LLSKWPQ-TSTS 343
           T            +R           ++ T++ +       +A +   L+ K+    S +
Sbjct: 365 T------GLNPEWLRYYFAAK-----LNATMEDIDLNLDDFQARVNSDLVGKYVNIASRA 413

Query: 344 KGIIDPAV-----LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
            G +          SA+ + L     +  L     +   +++      A  H + +
Sbjct: 414 AGFLIKRFDGRVQDSAMNHPL-----VAKLRDAIAQIAASYEAREYGRALRHTMEL 464


>gi|330686341|gb|EGG97946.1| isoleucine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 916

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALEQIEIQKKDFKRLGVRGDFNDPYITLKPEYEAAQIRLFGEMAEKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGQAPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651


>gi|228942204|ref|ZP_04104744.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228975133|ref|ZP_04135692.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981772|ref|ZP_04142067.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228777884|gb|EEM26156.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228784654|gb|EEM32674.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228817538|gb|EEM63623.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326942856|gb|AEA18752.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 544

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRDLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|183984451|ref|YP_001852742.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M]
 gi|183177777|gb|ACC42887.1| methionyl-tRNA synthetase MetS [Mycobacterium marinum M]
          Length = 518

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 83/218 (38%), Gaps = 42/218 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  IE    ++ H GFL+  G KMSKS GN I    L
Sbjct: 256 DLHMIGKDIIRFHAVYWPAFLMSA-GIELPRRVFAH-GFLHNRGEKMSKSLGNTIDPMGL 313

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE-------------AEILLSKW 337
           +ET       +    +R  +L    + +   ++ + +               A+  LS  
Sbjct: 314 IET-------YGVDQVRYFLLREVPFGQDGSYSEEAIINRINTDLANELGNLAQRSLSMI 366

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQA-LHKLARESTKNHDLLPIFNASAHILGIEV 396
            + +    + +P   SA   +L    AI   L +  RE   N  +     A   +LG   
Sbjct: 367 AK-NLGGAVPEPGEFSAADREL---LAIADGLLERVREHFDNQSMHLALEAIWLMLG--- 419

Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
              H NK  S       Q+  +L K +  S AD  R +
Sbjct: 420 ---HANKYFSD------QQPWVLRKSE--SEADQARFR 446



 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   I  D + R  R    +     VR +T  D+  ++       +       + 
Sbjct: 17  PHVGHAYEYIATDAIARFKRLDGFD-----VRFLTGTDEHGLK---VAQAAAAAEIPTAQ 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L   +     R T  +H      + + +   G  Y  +    +  
Sbjct: 69  LARRNSDVFQRMQEALNI-SFDRFIRTTDADHYEASQEIWRRMDAAGDIYLDSYSGWYSV 127

Query: 157 S 157
            
Sbjct: 128 R 128


>gi|33152186|ref|NP_873539.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
 gi|68565995|sp|Q7VMC9|SYM_HAEDU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|33148408|gb|AAP95928.1| methionyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
          Length = 684

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A     D+ + T NI+ H G++ ++G KMSKS G FI  +  L 
Sbjct: 289 HFIGKDIVYFHSLFWPAMLEGCDQRKPT-NIFAH-GYVTVDGVKMSKSRGTFIQASTYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                 +      +R       Y   ++   +R+ + ++ L  + Q   S 
Sbjct: 346 ------KHIDPECLRYY-----YAAKLN---ERIEDLDLNLDDFVQRVNSD 382


>gi|313669053|ref|YP_004049337.1| isoleucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006515|emb|CBN87979.1| putative isoleucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|212224954|ref|YP_002308190.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212009911|gb|ACJ17293.1| isoleucyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 1065

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E+++ +            R 
Sbjct: 598 AASVIAFDTVPYRKVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDP-------FRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + L + + +L+
Sbjct: 651 YMLWA--TNPWENLKFSWKGLAQVKRMLN 677


>gi|189030341|sp|A1U4A0|SYL_MARAV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 861

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 37/140 (26%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N I    +++          A  +RL M+      + ++++   +  A   L 
Sbjct: 620 KMSKSKNNGIDPQAIIDQHG-------ADTVRLFMMFAAPPEQSLEWSDSGVEGAHRFLK 672

Query: 336 KWPQ------TSTSKGIIDPA---------------VLSALYND------LNTVSAIQAL 368
           +  +             +DPA                ++ + +D       NT  AI A+
Sbjct: 673 RLWRMVNEHTAGGDAPAVDPANLNGAQKDLRRKTHETIAKVSDDISRRLTFNT--AIAAV 730

Query: 369 HKLARESTKNHDLLPIFNAS 388
            +L  E  +  D  P   A 
Sbjct: 731 MELLNEVGRLSDDEPQSRAV 750


>gi|68250200|ref|YP_249312.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
 gi|81335378|sp|Q4QJZ5|SYM_HAEI8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68058399|gb|AAX88652.1| methionyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
          Length = 682

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLSDKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|40788954|dbj|BAA04877.2| KIAA0028 [Homo sapiens]
          Length = 904

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 79  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 130

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ ++  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 131 AFGLPAENAAVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 188

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 189 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 237


>gi|15888821|ref|NP_354502.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|25009368|sp|Q8UFA2|SYM_AGRT5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15156579|gb|AAK87287.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 516

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R       V ++    +   K+ + AR E        +   
Sbjct: 20  PHIGHAYELIATDAMARFQRLDG--MDVFFLTGTDEHGQKMQQTARAE------GISPEE 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +N+ QF +   +L   +     R T 
Sbjct: 72  LAQRNSDQFRE-MGKLLNASNDDFIRTTE 99


>gi|120555655|ref|YP_960006.1| leucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|120325504|gb|ABM19819.1| leucyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 864

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 37/140 (26%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N I    +++          A  +RL M+      + ++++   +  A   L 
Sbjct: 623 KMSKSKNNGIDPQAIIDQHG-------ADTVRLFMMFAAPPEQSLEWSDSGVEGAHRFLK 675

Query: 336 KWPQ------TSTSKGIIDPA---------------VLSALYND------LNTVSAIQAL 368
           +  +             +DPA                ++ + +D       NT  AI A+
Sbjct: 676 RLWRMVNEHTAGGDAPAVDPANLNGAQKDLRRKTHETIAKVSDDISRRLTFNT--AIAAV 733

Query: 369 HKLARESTKNHDLLPIFNAS 388
            +L  E  +  D  P   A 
Sbjct: 734 MELLNEVGRLSDDEPQSRAV 753


>gi|315500447|ref|YP_004089250.1| isoleucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
 gi|315418459|gb|ADU15099.1| isoleucyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
          Length = 988

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 19/150 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +   ++        +     ++RL +
Sbjct: 635 SCGTRGRAPYKAVLTHGFVLDEQGEKMSKSKGNVVAPQDI-------AKESGVEILRLWV 687

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYNDLNTVS--A 364
            ++ Y + +    Q +        K   +         G  D   ++  Y D+ ++    
Sbjct: 688 ALSDYSDDLRIGKQIIQTTVDAYRKLRNSLRYLLGALNGYTDDEAVN--YQDMPSLERYI 745

Query: 365 IQALHKL---ARESTKNHDLLPIFNASAHI 391
           +  +H+L    R +   +D   +    A  
Sbjct: 746 LHHVHELDAKVRAAYDAYDFAGVIRPVADF 775


>gi|238020730|ref|ZP_04601156.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147]
 gi|237867710|gb|EEP68716.1| hypothetical protein GCWU000324_00620 [Kingella oralis ATCC 51147]
          Length = 688

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A           + I+ H GFL ++G+KMSKS G FIT    LE
Sbjct: 295 HFIGKDILYFHALFWTAMLE-YSGHRAPSGIFAH-GFLTVDGQKMSKSRGTFITARSYLE 352

Query: 294 TKKFGGRSWPAPVIRLAM 311
                 +      +R  +
Sbjct: 353 ------QGLNPEWMRYYI 364


>gi|261380481|ref|ZP_05985054.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284796729|gb|EFC52076.1| isoleucine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 930

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 596 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 648

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 649 LKRVTESYRRIRNTLS--------FLFANLSDFN 674


>gi|254172065|ref|ZP_04878741.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033961|gb|EEB74787.1| isoleucyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 1066

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E+++ +            R 
Sbjct: 598 AASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDP-------FRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + L + + +L+
Sbjct: 651 YMLWA--TNPWENLRFSWKGLEQVKRMLN 677


>gi|158291334|ref|XP_312846.4| AGAP003156-PA [Anopheles gambiae str. PEST]
 gi|157017725|gb|EAA08464.4| AGAP003156-PA [Anopheles gambiae str. PEST]
          Length = 865

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        I++H   ++  G KMSKS GN I   ++        + +    +R  +
Sbjct: 590 SVAARGKAPYRAIFVHGFAVDEHGMKMSKSLGNVICPQQI-------AKQYGCDALRWWV 642

Query: 312 LMT 314
              
Sbjct: 643 CAH 645


>gi|73668992|ref|YP_305007.1| glutamyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
 gi|115305770|sp|Q46CG5|SYE_METBF RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|72396154|gb|AAZ70427.1| glutamyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
          Length = 571

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 46/143 (32%), Gaps = 32/143 (22%)

Query: 11  LERKITE---FQAIDP---SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           L  K       + ++      + M    P     A +G+AR M+   V    ++ Y G+ 
Sbjct: 83  LSVKKEPDKGLKPLEGAENGKVVM-RFAPNPNGPATLGSARGMV---VNSEYVKMYGGKF 138

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            + +     DI   +++                         ++ D   L  + P     
Sbjct: 139 VLRFDDTDPDIKRPLLQA---------------------YDWYLDDFKWLGVV-PDQVVY 176

Query: 125 ATNHIPQMIYLIQNIILHGHAYE 147
           A++H P      + +I  G AY 
Sbjct: 177 ASDHFPMYYDYARKLIEMGKAYV 199


>gi|218767582|ref|YP_002342094.1| isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|81543093|sp|Q9JVY4|SYI_NEIMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|121051590|emb|CAM07888.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis Z2491]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|308272771|emb|CBX29375.1| Arginyl-tRNA synthetase [uncultured Desulfobacterium sp.]
          Length = 554

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 50/316 (15%), Positives = 94/316 (29%), Gaps = 47/316 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   V D    +L +   +    Y  N +      + R+         
Sbjct: 131 PT--GPLHVGHGRGAAVGDSTANILSFCGYDVQREYYINDSGRQISTLGRSVYLRYKELH 188

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
            + I+         +++D  +                 + +             +  N++
Sbjct: 189 EEKINFPGDCYQGDYIRDIAQ-KIKNENQIDLLDEPEEKAVMFCARFAADDILADIKNDL 247

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN---PADFILWKRSTPMEPGWESPWG 209
                   N+  +S + + +      V E +  KN     D   W +++      +    
Sbjct: 248 ELFGVKFDNW--YSEQSLFDSGKVKSVLEDFKNKNIIYEKDGAFWFKTSEYGDEKDR--- 302

Query: 210 RGRPGWHIECSAMSSHYLGKVF--DI--HGGGLDLIFP---------HHEN--EIAQSCC 254
                       + ++ L   F  DI  H    D  F          HH     I  S  
Sbjct: 303 ----------VVIRNNGLTTYFASDIAYHIDKFDRGFERIVDVWGADHHGYIQRICASIE 352

Query: 255 ADRIE--KTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           A   +  +   I I    L   G    MS  +G F+T+ +++       +   A   R  
Sbjct: 353 ASGQKEDQFNVILIQLVNLLRNGEPVAMSTRSGEFVTLEDVV-------KEVGADAARFI 405

Query: 311 MLMTHYREPIDFTVQR 326
            L  HY   +DF ++ 
Sbjct: 406 FLTRHYESHLDFDLEL 421


>gi|301154877|emb|CBW14340.1| leucyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 862

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHTGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND----- 358
             +  A+  L +          + +K  +D   LSA               + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYSQNPAKTALDVTALSADQKALRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + T+         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTRAPLDSEQDRAVMA 751


>gi|171057921|ref|YP_001790270.1| isoleucyl-tRNA synthetase [Leptothrix cholodnii SP-6]
 gi|170775366|gb|ACB33505.1| isoleucyl-tRNA synthetase [Leptothrix cholodnii SP-6]
          Length = 998

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 52/143 (36%), Gaps = 23/143 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +C  +       +  H    + +GRKMSKS GN +    +            A ++RL +
Sbjct: 653 ACALEDRAPYRGLLTHGFATDGQGRKMSKSLGNTVEPQTITSKLG-------AEIVRLWV 705

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
             T Y   ++   + L        +   T      +    DPAV        +TV A Q 
Sbjct: 706 ASTDYSGDLNIDDKILARVVDAYRRIRNTLRFLMANSSDFDPAV--------DTVPADQL 757

Query: 368 L----HKLARESTKNHDLLPIFN 386
           L    + LAR +    ++L  F 
Sbjct: 758 LEIDRYALARTAELQAEILAHFE 780


>gi|23097817|ref|NP_691283.1| isoleucyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|81747084|sp|Q8ET99|SYI2_OCEIH RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|22776041|dbj|BAC12318.1| isoleucyl tRNA synthetase [Oceanobacillus iheyensis HTE831]
          Length = 1022

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 14/117 (11%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     K F  D+   G+D       + +A S           +      L+  GRKMSK
Sbjct: 526 NDELFNKQFPADVVIEGVDQTRGWFYSLLAVSTLFTGKTPYKRVLSLGHILDEHGRKMSK 585

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILL 334
           S GN ++  EL+E        + A  +R A+L      P +   F+ + +++A+  +
Sbjct: 586 SKGNALSPVELIE-------EFGADALRWALLADS--SPWNNKRFSKKTVSQAKSKV 633


>gi|319896964|ref|YP_004135159.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
 gi|317432468|emb|CBY80824.1| methionyl-tRNA synthetase [Haemophilus influenzae F3031]
          Length = 684

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDETLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|316971900|gb|EFV55622.1| choline-phosphate cytidylyltransferase B [Trichinella spiralis]
          Length = 703

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 76/213 (35%), Gaps = 32/213 (15%)

Query: 14  KITEFQAIDPSN----IRMYVCGPTVYDFAHIGNARPMI----VFDVLYRLLRYYYGEKC 65
           +  +F           +R+Y  G   YD  H G+AR ++     F  +   L        
Sbjct: 75  EKMDFALASSGKASRPVRVYADGI--YDLFHYGHARQLMQAKNAFPNV--YLIVGVCGDK 130

Query: 66  VTYV---RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
           VT+V   + +TD D++        +      +A   +T +  ++   D        P H 
Sbjct: 131 VTHVNKGKTVTDEDERYESVRHCRYVDEVYRNAPWFVTMEFLKEMKIDFIA-HDAIPYHA 189

Query: 123 PRATNHIPQMIY----LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID------E 172
           P  ++ + +        ++     G    + ++++       +Y S+ RR +       E
Sbjct: 190 PGVSDDLYEPFRRAGVFVETKRTEG---VSTSDVVARIVK--DYDSYVRRNLARGYSAKE 244

Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
             +G    +KY  +N  D  L +R       WE
Sbjct: 245 LNVGYFAEKKYKLQNNID-SLKERGKEFFTKWE 276


>gi|268325386|emb|CBH38974.1| arginyl-tRNA synthetase, N-terminus [uncultured archaeon]
          Length = 507

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 24/73 (32%), Gaps = 4/73 (5%)

Query: 36  YDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND- 94
               HIG+ R  I+ DVL R+L+    +    Y  N  D+  +I              D 
Sbjct: 119 DGPLHIGHLRNAIIGDVLARVLKRAGFDVETQYYVN--DLGRQIAVAVWGAGRMALAADK 176

Query: 95  -AISIITSKNTQQ 106
            A   +       
Sbjct: 177 KADHAVADVYIAA 189


>gi|258646150|ref|ZP_05733619.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
 gi|260403533|gb|EEW97080.1| isoleucine--tRNA ligase [Dialister invisus DSM 15470]
          Length = 951

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 48/137 (35%), Gaps = 14/137 (10%)

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W        P W    +A       +  D H G          + +  S   +       
Sbjct: 554 WNGVLKDPHPVWKETGAAYPCDLYLEGSDQHRGWFH-------SSLLTSVAVNGCAPYKA 606

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +  H   ++ EGRKMSKS GN +   ++++        + A V+RL +    Y+  +  +
Sbjct: 607 VLTHGFTMDGEGRKMSKSVGNVVAPQDIID-------KYGADVMRLWISSVDYQGDVRLS 659

Query: 324 VQRLTEAEILLSKWPQT 340
            + +     +  K   T
Sbjct: 660 DKIVKSMSDVYRKIRNT 676


>gi|261822290|ref|YP_003260396.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606303|gb|ACX88789.1| methionyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 676

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L + L      +     A    + ++      A   I+ + ++   ++++  
Sbjct: 400 ISKRFDGKLADKLVDPDLYKTFTDAAASIAEAYNSRESGRAIREIMALADIANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|94496575|ref|ZP_01303151.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94423935|gb|EAT08960.1| leucyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 851

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 23/120 (19%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +  ++++E        + A  +R  ML      P    + +T   +  + 
Sbjct: 622 EKMSKSKKNVVDPDDIIE-------QYGADAVRWFMLS---DSPPERDLPWTDSGIEGSW 671

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
             +++  +              AL          + LH+      K+ + L    A A I
Sbjct: 672 RFVNRVWRLFAEADAAAEGQDKALD---------RKLHQTIDGVAKDIESLGFNKAVAKI 722


>gi|329667571|gb|AEB93519.1| valyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          ++ +H    + 
Sbjct: 460 GWPDENSEDFKRYFPTNTLV--TGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDP 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +GRKMSKS GN +   ++++        + A  +R  +L  
Sbjct: 518 QGRKMSKSLGNGVDPMDVVD-------EYGADALRWFLLNG 551


>gi|322386609|ref|ZP_08060234.1| leucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
 gi|321269282|gb|EFX52217.1| leucine--tRNA ligase [Streptococcus cristatus ATCC 51100]
          Length = 835

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 42/215 (19%), Positives = 69/215 (32%), Gaps = 60/215 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  +   L
Sbjct: 611 AKMSKSLKNVVNPDDVVE-------QYGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 663

Query: 335 SKWPQTSTSKGIID--------------PAVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+                AV   +     NT   I  L      + K  
Sbjct: 664 DRVYRLMTSKEIVADNNGALDMVYHETVKAVTEQIEELKFNTT--IAQLMIFVNAANKEE 721

Query: 380 DL--------LPIFNASAHILGIEVCKEHLN----------------KNISIAIEKLVQE 415
            L        + +    A  L  E+ +                    K +   +E +VQ 
Sbjct: 722 KLYVEYAKGFIQLLAPFAPHLAEELWQAVAQTGQSISYVAWPTYDESKLVEAEVEIVVQI 781

Query: 416 ----RLILLKMKKFSSADYIRKQLESKGFILEDYK 446
               R  L+  K  S     R++L+     L D K
Sbjct: 782 KGKVRAKLVVAKDLS-----REELQE--IALADEK 809


>gi|315658520|ref|ZP_07911392.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496849|gb|EFU85172.1| isoleucine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 916

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD   L      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALEQVELQKKDFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQTST----SKGIIDPAVLSALYNDL 359
           L +   +  K   T      +    +P   + L +DL
Sbjct: 638 LKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDL 674


>gi|261393180|emb|CAX50798.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase; IleRS)
           [Neisseria meningitidis 8013]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|260222016|emb|CBA31159.1| Leucyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 922

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 15/135 (11%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + Y C    Y     H+G+ R   + D+L R LR       V                A 
Sbjct: 45  KFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRM--NGHNVLMPMGWDAFGLPAENAAL 102

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NII 140
           +           +  T +N          +  LA           P      Q     ++
Sbjct: 103 KNKVP------PAKWTYENIAYMKGQMQAMG-LAIDWSREVATCDPSYYKWNQWLFLKML 155

Query: 141 LHGHAYEANNEIIFD 155
             G AY     + +D
Sbjct: 156 EKGIAYRKTQVVNWD 170


>gi|219847425|ref|YP_002461858.1| leucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541684|gb|ACL23422.1| leucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 999

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 32/99 (32%), Gaps = 11/99 (11%)

Query: 20  AIDPSNIRMYVCGPTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
            IDP+  + YV     Y   D   +G+ R  +  DV+ R  R       V +        
Sbjct: 37  PIDPAKPKYYVLDFYPYPSGDGLSVGHCRNYVPTDVVARYYRMRGYN--VLHPMGWDAFG 94

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                 A      I      +++T + +  + +    L 
Sbjct: 95  LPTENAA------IKTKTNPAVLTRRYSANYKRQMNMLG 127


>gi|114586465|ref|XP_001147524.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 1 [Pan
           troglodytes]
 gi|114586467|ref|XP_001147676.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 3 [Pan
           troglodytes]
 gi|114586469|ref|XP_001147749.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial isoform 4
           [Pan troglodytes]
          Length = 903

 Score = 41.0 bits (95), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ ++  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|321312568|ref|YP_004204855.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320018842|gb|ADV93828.1| leucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 804

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ +         A  +RL  M M   
Sbjct: 557 KEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVSSHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W       G ++  ++ 
Sbjct: 610 DASIAWSESGLDGARRFLDRVWRLFVEENGELNGKIVE 647


>gi|313885240|ref|ZP_07818992.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619931|gb|EFR31368.1| isoleucine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 34/95 (35%), Gaps = 8/95 (8%)

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           N    +  A   +      +  GF+    G KMSKS GN I   ++        +   A 
Sbjct: 564 NSSFTTSVAVNHKPPYKAVLSQGFVMDGNGMKMSKSLGNTILPADI-------TKELGAD 616

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +IRL +    Y   +  + + L +      K   T
Sbjct: 617 IIRLWVASVDYESDVRISKEILKQISEAYRKIRNT 651


>gi|302348145|ref|YP_003815783.1| Isoleucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
 gi|302328557|gb|ADL18752.1| Isoleucyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
          Length = 1061

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 9/75 (12%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
                    + +H   L+ +GR+M KS GN++ + ++L       + +P  V+RL +L  
Sbjct: 579 GFGSAPYRRVLVHGFVLDEQGREMHKSLGNYVAVEDIL-------KKYPRDVLRLYLLRN 631

Query: 314 THYREPIDFTVQRLT 328
           T + E + F+   + 
Sbjct: 632 TTW-EDLRFSWHNID 645


>gi|221126343|ref|XP_002166348.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 904

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 15/135 (11%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           + Y C    Y     H+G+ R   + D+L R LR       V                A 
Sbjct: 45  KFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRM--NGHNVLMPMGWDAFGLPAENAAL 102

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NII 140
           +           +  T +N          +  LA           P      Q     ++
Sbjct: 103 KNKVP------PAKWTYENIAYMKGQMQAMG-LAIDWSREVATCDPSYYKWNQWLFLKML 155

Query: 141 LHGHAYEANNEIIFD 155
             G AY     + +D
Sbjct: 156 EKGIAYRKTQVVNWD 170


>gi|205374573|ref|ZP_03227368.1| leucyl-tRNA synthetase [Bacillus coahuilensis m4-4]
          Length = 653

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 58/161 (36%), Gaps = 18/161 (11%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  ++++E+         A  +RL  M M   
Sbjct: 408 KEPFQKLFNQGMILGENNEKMSKSKGNVVNPDDIVESHG-------ADTLRLYEMFMGPL 460

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAI--QALHKLAR 373
              I ++   L  +   L + W    T  G +   V +       T  A   +  H+  +
Sbjct: 461 EASIAWSTTGLDGSRRFLDRIWRLFITEDGTVSEKVQA-------TADASLDKTYHQTVK 513

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
           + T++++ L    A + ++                +E  ++
Sbjct: 514 KVTEDYEGLRFNTAISQLMVFINDAYKAEAISKDYVEGFIK 554


>gi|154498312|ref|ZP_02036690.1| hypothetical protein BACCAP_02301 [Bacteroides capillosus ATCC
           29799]
 gi|150272623|gb|EDM99801.1| hypothetical protein BACCAP_02301 [Bacteroides capillosus ATCC
           29799]
          Length = 817

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 25/133 (18%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L   G KMSKS GN +  N+++         + A  +R   M +  +
Sbjct: 573 KEPYQKRTSHGMILGEGGEKMSKSRGNVVNPNDVVA-------QYGADTMRTYIMFIGDF 625

Query: 317 REPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YND-----LNT 361
            +   ++   +   +  L +     +  T       A  SA+        +D      NT
Sbjct: 626 EKAASWSDNAVKGCKRFLDRVWNLSENLTDSMDYSAANESAIHKTIKKVSDDIEAMKFNT 685

Query: 362 VSAIQALHKLARE 374
             AI AL  L  +
Sbjct: 686 --AIAALMALVND 696


>gi|255513996|gb|EET90260.1| tRNA synthetase valyl/leucyl anticodon-binding [Candidatus
           Micrarchaeum acidiphilum ARMAN-2]
          Length = 946

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G DL+  H    +       + +K     + NGF+N EG KMSKS GN I + +     
Sbjct: 584 SGPDLLLNHLIMYLFSHIAMFKSDKWPKQIVVNGFVNYEGEKMSKSMGNIIPLLD----- 638

Query: 296 KFGGRSWPAPVIRL 309
             G   + A ++R 
Sbjct: 639 --GIEKYGADIVRF 650



 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/108 (14%), Positives = 30/108 (27%), Gaps = 16/108 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P V    H+G+ R     D   R LR            + T     I+  A++   +   
Sbjct: 38  PYVNMPPHLGHLRTYGTADFYARYLRMRGLNVLYPMAWHFT--GTPILAIAKR--VAAND 93

Query: 93  NDAISIITSKNTQQFVKDTTRL----------ACLAPTHQPRATNHIP 130
            +    +   +     +   ++          + L      RA   I 
Sbjct: 94  EELKEELRMYHIDD--ETMAKMSDPNFITEYFSVLMKDAMVRAGYSID 139


>gi|229846827|ref|ZP_04466934.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
 gi|229810316|gb|EEP46035.1| methionyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
          Length = 682

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLSDKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|167933048|ref|ZP_02520135.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7b]
          Length = 336

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 18/74 (24%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI----- 320
           + +G +  +G+KMSKS GN ++ NE+++T       + A   R        R  I     
Sbjct: 128 LVHGHIGFDGKKMSKSLGNVVSPNEVIDT-------YGADAFRYYF-----RRQIPTLDD 175

Query: 321 -DFTVQRLTEAEIL 333
            DFT ++  +A   
Sbjct: 176 GDFTWEKFEKAYNN 189


>gi|163815524|ref|ZP_02206897.1| hypothetical protein COPEUT_01689 [Coprococcus eutactus ATCC 27759]
 gi|158449161|gb|EDP26156.1| hypothetical protein COPEUT_01689 [Coprococcus eutactus ATCC 27759]
          Length = 821

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 24/162 (14%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E       H   L   G KMSKS GN +  +++++             I    L      
Sbjct: 584 EPYQKRTSHGMILGENGEKMSKSRGNVVNPDDIVDVYGADTLRTYEMFIGAFDLAAS--- 640

Query: 319 PIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YNDL-----NTVS 363
              ++   +      L +      + T +      + + +        ND      NT  
Sbjct: 641 ---WSEDGVKGCRRFLDRVWKLQDSVTDEKGYSKDMETKMHQVIKKVSNDFENLKYNT-- 695

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           AI A+  L  +  K   +      +  IL +     H+ + +
Sbjct: 696 AIAAMMALLNDFYKKGSVTADEFKTLLIL-LNPVAPHITEEL 736


>gi|159042094|ref|YP_001541346.1| glutamyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
 gi|229470612|sp|A8M9D7|SYE_CALMQ RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|157920929|gb|ABW02356.1| glutamyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
          Length = 588

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 57/309 (18%), Positives = 88/309 (28%), Gaps = 66/309 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + H+G+ARP IV       L+Y    K   ++    D D +I           P+
Sbjct: 112 PNPDFYLHLGSARPAIVNYAYK--LKYANKGKDSRFILRFEDTDPRIKR---------PL 160

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
            DA   I         +D   L         + ++ +       + +I +G AY      
Sbjct: 161 LDAYDAI--------REDLRWLGVKWDEEYIQ-SDRMSIYYEYARKLIENGGAYVVAKGS 211

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME--PGWESPWGR 210
             +           R KI+ +   TR  E        D +L       E     ++    
Sbjct: 212 GCEPDDWK------RLKIEGKPCLTREAESSRNLELFDKMLEGAFNEGEAIVAVKTDLSS 265

Query: 211 GRPG---W------------HIECSAMSSHY-------LGKVFDIHGGGLDLIFP---HH 245
             P    W            H     +   Y            D H  G+  +     H 
Sbjct: 266 PDPSIRDWVAFRVIDAHKYPH---PRVGDKYIVWPTYNFAVAIDDHLMGITHVLRAQEHR 322

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS-------NGNFITINELLETKKFG 298
            N + Q              IH G L +EG K+SKS         + +T+  L       
Sbjct: 323 VNTVKQYYVFKAFGWEQPYTIHFGRLKIEGLKLSKSILKKLNLTKDDVTLPTL---AGLR 379

Query: 299 GRSWPAPVI 307
            R      I
Sbjct: 380 NRGITPEAI 388


>gi|57641683|ref|YP_184161.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|74506312|sp|Q5JJ31|SYI_PYRKO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|57160007|dbj|BAD85937.1| isoleucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 1065

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E+++ +            R 
Sbjct: 598 AASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDP-------FRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + L + + +L+
Sbjct: 651 YMLWA--TNPWENLRFSWKGLEQVKRMLN 677


>gi|88855116|ref|ZP_01129781.1| valyl-tRNA synthetase [marine actinobacterium PHSC20C1]
 gi|88815644|gb|EAR25501.1| valyl-tRNA synthetase [marine actinobacterium PHSC20C1]
          Length = 865

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 64/194 (32%), Gaps = 32/194 (16%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G D+I     +   +S          N  I    ++ + +KMSKS GN +T   +L+   
Sbjct: 547 GQDIIRTWLFSTALRSELEHGTVPWRNAGISGFIVDPDRKKMSKSKGNVVTPKGMLDDHG 606

Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQR-------------LTEAEILLSKWPQTSTS 343
                  +  +R     +       F  Q              +  A   +  +P  + +
Sbjct: 607 -------SDAVRYWAASSRLGTDAAFDPQNPKQIKIGRRLAIKVLNASKFVYSFPAPAAA 659

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
                  V  AL         ++ L +LA    +    L  F+   H   +EV ++    
Sbjct: 660 AMDSGAVVTEALD--------LEMLAELASVVDQATTALDNFD---HAKALEVTEKFFWT 708

Query: 404 NISIAIEKLVQERL 417
                +E LV+ER 
Sbjct: 709 FCDDYLE-LVKERA 721


>gi|114331418|ref|YP_747640.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313769|sp|Q0AG57|SYL_NITEC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114308432|gb|ABI59675.1| leucyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 868

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 15/139 (10%)

Query: 23  PSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P   + Y      Y     H+G+ R   + DVL R  R          V      D   +
Sbjct: 30  PDKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYRRMQGYN-----VMQPMGWDAFGL 84

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ--- 137
                E+ +I      +  T  N          L       +  AT   P+     Q   
Sbjct: 85  PA---ENAAIQKGVPPAKWTYDNIAYMRSQLQSLGLAIDWKRELAT-CDPEYYRWNQWLF 140

Query: 138 -NIILHGHAYEANNEIIFD 155
             ++  G AY+    + +D
Sbjct: 141 LRMLEKGIAYQKTQVVNWD 159


>gi|289551024|ref|YP_003471928.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180556|gb|ADC87801.1| Isoleucyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 916

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGYYAPFVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD   L      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALEQVELQKKDFKSLGVRGDFNNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 11/97 (11%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQTST----SKGIIDPAVLSALYNDL 359
           L +   +  K   T      +    +P   + L +DL
Sbjct: 638 LKQTSDVYRKIRNTLRFMLGNVNDFNPDTDAVLESDL 674


>gi|258510147|ref|YP_003183581.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257476873|gb|ACV57192.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 650

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 53/185 (28%), Gaps = 50/185 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H                       +GF  ++G KMSKS GN I    L
Sbjct: 257 DVHVVGKDIVRFHAVYWPIILMAL--GLPLPKKVFGHGFFLVKGGKMSKSKGNVIDPLSL 314

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDFTVQRLTE----------------A 330
           ++        +     R  +L    R     +   FT + + E                 
Sbjct: 315 VDR-------YGRDAFRYFLL----REIPFGQDGTFTPEGMVERLNYDLANDFGNLVHRT 363

Query: 331 EILLSKW---------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
             +L+++                        +   V   +   L    A+  L  L R +
Sbjct: 364 AAMLNRFNDGVVPAPGSLTDVDRALRDLAAEVKAKVEENMDQ-LQFSVALAELWNLVRAA 422

Query: 376 TKNHD 380
            K  D
Sbjct: 423 NKYID 427



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 47/137 (34%), Gaps = 15/137 (10%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y  D  HIG+A   +  D + R  R    +  V ++    +   KI +R
Sbjct: 2   KPTFYVTTPIYYPNDKLHIGHAYTTVAADAIARYKRLRGYD--VFFLTGTDEHGLKIQQR 59

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDT-TRLACLAPTHQPRATNHIPQ-MIYLI-QNI 139
           A Q                     +++D   +L         R T    + ++  I + +
Sbjct: 60  AEQAGLEPKAFLDP-------IIAWIQDLWKKLDISYDDF-IRTTEARHERVVEQIFERL 111

Query: 140 ILHGHAYEANNEIIFDT 156
           +  G  Y +  +  + T
Sbjct: 112 LQQGDIYLSEYQGWYCT 128


>gi|145605679|ref|XP_370452.2| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15]
 gi|145013476|gb|EDJ98117.1| hypothetical protein MGG_06949 [Magnaporthe oryzae 70-15]
          Length = 748

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D++  H     A     D         + +    L G+KMSKS GN +     
Sbjct: 202 DIHIIGKDIVRFHCVYWPALLMALDL--PLPRRILTHSHWTLGGKKMSKSLGNVVNP--F 257

Query: 292 LETKKFGGRSWPAPVIRLAMLM 313
           L   +FG       VIR  ++ 
Sbjct: 258 LAMDRFGV-----EVIRYFLIS 274


>gi|124802884|ref|XP_001347624.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
 gi|23495207|gb|AAN35537.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
          Length = 889

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 56/154 (36%), Gaps = 22/154 (14%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A  +++ D + R  +    +   T     T  D+  ++ A Q   +   N 
Sbjct: 234 VNGDPHIGHAYEIVLADAIARYHKIIGRDTFFT-----TGADEHGLKIANQAAKN---NM 285

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLI-QNIILHGHAYEANNEI 152
               +  KN  +F ++  +L  +   +  R T +   ++   +      +G  Y    E 
Sbjct: 286 TPKELCDKNVLKF-QNLNKLLYVEDDYYVRTTRDSHKKIAQEVWDKCEKNGDIYLGEYEG 344

Query: 153 IFDTS----------SIPNY-GSFSRRKIDEQKM 175
            ++             + NY    +  K+++ K 
Sbjct: 345 WYNVREETYVPENEAKLMNYIDPLNNIKLEKMKE 378


>gi|42518883|ref|NP_964813.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|81667980|sp|Q74JZ8|SYV_LACJO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|41583169|gb|AAS08779.1| valyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 40/101 (39%), Gaps = 9/101 (8%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E S     Y      +   G D+IF      I QS          ++ +H    + 
Sbjct: 460 GWPDENSEDFKRYFPTNTLV--TGYDIIFFWVSRMIFQSLHFTGKRPFDDVVLHGLIRDP 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +GRKMSKS GN +   ++++        + A  +R  +L  
Sbjct: 518 QGRKMSKSLGNGVDPMDVVD-------EYGADALRWFLLNG 551


>gi|15789599|ref|NP_279423.1| methionyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169235311|ref|YP_001688511.1| methionyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|25009397|sp|Q9HSA4|SYM_HALSA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10579953|gb|AAG18903.1| methionine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167726377|emb|CAP13158.1| methionine--tRNA ligase [Halobacterium salinarum R1]
          Length = 689

 Score = 41.0 bits (95), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 15/148 (10%)

Query: 16  TEFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
            ++   DP+ +    CG P      HIG+ R  +  D   R LR    E   T   + TD
Sbjct: 4   EDYPTDDPAVV---TCGLPYPTGDLHIGHLRTYVSGDAFSRALRKLGQE---TVFVSGTD 57

Query: 75  IDDKIIERARQEH--PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
           +    I     E     + +        +   ++F              +     ++   
Sbjct: 58  MHGTPIAVQAIEAGVGPLDLGLERHEQYADTFEEFSVAFDTYG--HTDEET----NVELT 111

Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIP 160
              +     + H YE   ++ +D  +  
Sbjct: 112 REFVGAWEDNDHVYETEIQVAYDPDADQ 139


>gi|330817988|ref|YP_004361693.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
 gi|327370381|gb|AEA61737.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
          Length = 718

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 64/170 (37%), Gaps = 33/170 (19%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FI    +++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGTKMSKSRGTFINAKSVID 364

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT------EAEI---LLSKWPQ-TSTS 343
           T            +R       Y   ++ T++ L       +A +   L+ K+    S +
Sbjct: 365 T------GMNPEWLRYY-----YAAKLNATMEDLDLNLADFQARVNSDLVGKYVNIASRA 413

Query: 344 KGIIDPAVL-----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
            G +          SA+ + L     + +L +   +   +++      A 
Sbjct: 414 AGFLIKRFEGRVQDSAMNHPL-----LASLREAIPQIAAHYEAREYGRAL 458



 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 27/85 (31%), Gaps = 8/85 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V YV         I+ RA QE        +   
Sbjct: 33  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYVGADDTHGTPIMLRAEQEGL------SPKQ 84

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQP 123
           +  +   +  +D             
Sbjct: 85  LIERVWGEHKRDFDSFGISFDNFYT 109


>gi|239947311|ref|ZP_04699064.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921587|gb|EER21611.1| leucyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 834

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 8/110 (7%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  K  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNKFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             IR  +L  +   + ++++   +      +++      +   +   +  
Sbjct: 623 DAIRFFVLSDSPPEKDLEWSASGIEGCSRFINRLEHMFEAIDSLKDDITE 672


>gi|227877308|ref|ZP_03995381.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256848756|ref|ZP_05554190.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|227863164|gb|EEJ70610.1| valine--tRNA ligase [Lactobacillus crispatus JV-V01]
 gi|256714295|gb|EEU29282.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|209548081|ref|YP_002279998.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209533837|gb|ACI53772.1| isoleucyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 963

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 51/160 (31%), Gaps = 18/160 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 612 SAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 664

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALYNDLNTVSA----- 364
           + + Y + +      +        K   T       +        L  DL          
Sbjct: 665 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDKGEEILLADL--PELEQLML 722

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
             +  L +L RE+    D   I  A      +E+   + +
Sbjct: 723 HRLAELDELVRENYDAFDFKKIARALIDFANVELSAFYFD 762


>gi|85712085|ref|ZP_01043138.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85694075|gb|EAQ32020.1| Methionyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 680

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A   + T N+W H GF+ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIIYFHSLFWPAMLKGAQFRQPT-NVWAH-GFITVNGTKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 349 -------HLNPEYLRYYF 359


>gi|327439174|dbj|BAK15539.1| leucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 804

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDLGLVHTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++ +         A  +RL  M M      + ++   L  A   L + W    
Sbjct: 583 NVVNPDDIIVSHG-------ADTLRLYEMFMGPLEASVAWSTNGLDGARRFLDRIWRLFV 635

Query: 342 TSKGIIDPAVLS 353
           T +G +   V  
Sbjct: 636 TDEGKLAAKVQD 647


>gi|315222465|ref|ZP_07864363.1| leucyl-tRNA synthetase [Streptococcus anginosus F0211]
 gi|315188433|gb|EFU22150.1| leucyl-tRNA synthetase [Streptococcus anginosus F0211]
          Length = 833

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 25/122 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  +++++        + A  +R   M M      I ++ + L  +   L
Sbjct: 609 AKMSKSLKNVVNPDDVVDR-------YGADTLRVYEMFMGPLDASIAWSEEGLEGSRKFL 661

Query: 335 SKWPQTSTSKGIIDP--------------AVLSALYN-DLNTVSAIQALHKLARESTKNH 379
            +  +  TSK I+                AV   +     NT  AI  L      + K  
Sbjct: 662 DRVYRLLTSKEIVAENSGALDKVYNQTVKAVTEQIEELKFNT--AIAQLMVFVNSANKED 719

Query: 380 DL 381
            L
Sbjct: 720 RL 721


>gi|296225004|ref|XP_002758315.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Callithrix jacchus]
          Length = 902

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 77  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 128

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ +I  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 129 AFGLPAENAAIERNLHPESWTQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 186

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 187 LFIKLYEAGLAYQEEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 235


>gi|256842870|ref|ZP_05548358.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|262045836|ref|ZP_06018800.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|293381704|ref|ZP_06627685.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|312977611|ref|ZP_07789358.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|256614290|gb|EEU19491.1| valyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|260573795|gb|EEX30351.1| valyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|290921751|gb|EFD98772.1| valyl-tRNA synthetase [Lactobacillus crispatus 214-1]
 gi|310895350|gb|EFQ44417.1| valine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|261204906|ref|XP_002627190.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239592249|gb|EEQ74830.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
 gi|239611595|gb|EEQ88582.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
 gi|327348391|gb|EGE77248.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
          Length = 580

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   MIV DVL R  +   G      +    +   KI + A     +     
Sbjct: 64  VNAAPHVGHLYTMIVADVLKRW-QILLGNTDAKLLTGTDEHGLKIQQAAAALGMTPQELC 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
             + +T        K+  R   +   H  R T   H   + Y    +   G+ Y + +E 
Sbjct: 123 DQNCLT-------FKNLARKGNVEYDHFIRTTDAEHKEAVRYFWDMLNHRGYIYTSKHEG 175

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 176 WYSVSDEAFY 185


>gi|270307759|ref|YP_003329817.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153651|gb|ACZ61489.1| methionyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 553

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 10/109 (9%)

Query: 40  HIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           H+G+ A   +  D+  R  R    E  V  V         I  RA QE          + 
Sbjct: 19  HLGHVAGAYLPADIFARYHRTRGDE--VLMVSGSDMHGTPITIRAEQE------GITAAE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
           +  +  + F+    +L      +   AT NH      +  ++   G+ Y
Sbjct: 71  VAERYHRLFMASWPKLGISWDCYTSTATANHARTAQEMFLSLYEKGYIY 119


>gi|145479761|ref|XP_001425903.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
 gi|124392975|emb|CAK58505.1| unnamed protein product [Paramecium tetraurelia]
          Length = 1027

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
             G DLI  H    +       + +       +  NG++ ++G+KMSK  GNF T+ +++
Sbjct: 626 SSGKDLIKNHLIFALFNHAAVWKDQPQLWPKGYFCNGYILVDGQKMSKQLGNFKTVQDMI 685

Query: 293 ETKKFGGRSWPAPVIRLAM 311
                  + + A   RL  
Sbjct: 686 -------KIYGADATRLGC 697


>gi|121998615|ref|YP_001003402.1| isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|166229742|sp|A1WY38|SYI_HALHL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|121590020|gb|ABM62600.1| Isoleucyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 941

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN +   ++++          A ++RL +    Y   I  +   
Sbjct: 594 HGFTVDEQGHKMSKSRGNVVAPQDVMDRLG-------ADILRLWVASADYSGEIAVSDNI 646

Query: 327 LTEAEILLSKWPQTST 342
           L        +   T+ 
Sbjct: 647 LQRTADAYRRMRNTAR 662


>gi|154174900|ref|YP_001408244.1| valyl-tRNA synthetase [Campylobacter curvus 525.92]
 gi|112802782|gb|EAU00126.1| valyl-tRNA synthetase [Campylobacter curvus 525.92]
          Length = 873

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 65/177 (36%), Gaps = 28/177 (15%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           Q   A       +I++H    + +GRKMSKS GN I   + +E        + A ++R  
Sbjct: 507 QGQNALEKLPFDDIYLHALVKDEQGRKMSKSLGNVIDPLDSIE-------EYSADILRFT 559

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-----TV- 362
            A+L    R  I  + +++       +K         + +        +DL+     T  
Sbjct: 560 LALLAVQGR-DIKLSDEKMKLVRNFTNKLYNAGKYLLLNESKF-----DDLDKIEVKTPL 613

Query: 363 SAI--QALHKLARESTKNHDLL---PIFNASAHILGIEVCKE--HLNKNISIAIEKL 412
            A      ++  RE  +N D        NA    L  E C     L+K    ++ +L
Sbjct: 614 GAYMQSRFYECVREVRENIDAYRFNDAANALYKFLWDEFCDWGIELSKASKASVAEL 670


>gi|20806841|ref|NP_622012.1| leucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
 gi|48428549|sp|Q8RCT6|SYL_THETN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|20515309|gb|AAM23616.1| Leucyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
          Length = 819

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 55/147 (37%), Gaps = 37/147 (25%)

Query: 266 IHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFT 323
           +H G  L  +G +MSKS GN I+ ++ +       + + + V RL ++    Y E   ++
Sbjct: 566 VHQGTILGPDGSRMSKSRGNVISPDDYI-------KQYGSDVFRLYLMFGFSYSEGGPWS 618

Query: 324 VQRLTE-------AEILLSKWPQTSTSKGIIDPAVLSA----------------LYND-- 358
            + +          E  + K+ +T  + G     +  A                L  D  
Sbjct: 619 DEGIKAIARFVNRVERFIEKFIETRQNPGKTKEEMEDAEKELNYVRHYTIKHVTLDADKF 678

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPI 384
             NT  AI  + +L     K  + + +
Sbjct: 679 EFNT--AIARIMELVNALYKYENEVEV 703


>gi|329767098|ref|ZP_08258626.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328837823|gb|EGF87448.1| isoleucyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 910

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-E 274
           H  C A+    L    D++  G D       + +  S     +     + +  GF+    
Sbjct: 535 HQGCCAIRED-LTYPADLYLEGSDQYRGWFNSSLITSVAVSGVAPYKEL-VSAGFVMDGN 592

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
           G KMSKS GN I+ N++       G+   A +IRL      Y + +  +   L +     
Sbjct: 593 GNKMSKSLGNVISPNDV-------GKELGAEIIRLWSASVDYTQDVRISKDILKQVSETY 645

Query: 335 SKWPQT 340
            K   T
Sbjct: 646 RKIRNT 651


>gi|327441141|dbj|BAK17506.1| isoleucyl-tRNA synthetase [Solibacillus silvestris StLB046]
          Length = 921

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   L+ EGRKMSKS GN I   +++         + A +IR+ +
Sbjct: 568 SVAINGHAPYKGLLTHGFVLDGEGRKMSKSLGNTIDPIKVMN-------QYGADIIRMWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y   +  ++  L +      K   T
Sbjct: 621 ASVDYTGDVRISMDMLKQVSETYRKVRNT 649


>gi|289643174|ref|ZP_06475302.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata]
 gi|289507005|gb|EFD27976.1| Methionine--tRNA ligase [Frankia symbiont of Datisca glomerata]
          Length = 685

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 33  PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           PT     H+G+ A P +  D   R  R         ++    D    +++RAR+E     
Sbjct: 129 PTPNGDLHLGHLAGPYLGADAYVRFQRMNGA--SAWHLTGSDDFQSYVVDRARRE----- 181

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYE 147
              + + + +  + + + +T RL  +        TN    ++P +      ++  G    
Sbjct: 182 -GRSSAEVAAHYSAE-IAETLRLMDIPLDQYT-VTNADPGYVPALKDFFTRLVDAGAIAP 238

Query: 148 ANNEIIFD 155
           A+   +FD
Sbjct: 239 ADGPALFD 246


>gi|257465980|ref|ZP_05630291.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315917136|ref|ZP_07913376.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313691011|gb|EFS27846.1| valyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 887

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 24/121 (19%)

Query: 260 KTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR- 317
              N++ H G +  + GRKMSKS GN     +L++        + A  IR +M+   Y  
Sbjct: 511 PFHNVFFH-GIVRDDLGRKMSKSLGNSPNPLDLID-------QYGADAIRFSMI---YNT 559

Query: 318 ---EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN-DLNTVSAIQALHKLAR 373
              + + F+ + L       +K    S         V+  L + D+NT    +  ++L  
Sbjct: 560 SQGQDVRFSEKLLEMGRNFANKIWNASR-------FVMMNLEDFDINTFDVKEVKYELVD 612

Query: 374 E 374
           E
Sbjct: 613 E 613


>gi|257452225|ref|ZP_05617524.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|317058768|ref|ZP_07923253.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
 gi|313684444|gb|EFS21279.1| valyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
          Length = 887

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 50/121 (41%), Gaps = 24/121 (19%)

Query: 260 KTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR- 317
              N++ H G +  + GRKMSKS GN     +L++        + A  IR +M+   Y  
Sbjct: 511 PFHNVFFH-GIVRDDLGRKMSKSLGNSPNPLDLID-------QYGADAIRFSMI---YNT 559

Query: 318 ---EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN-DLNTVSAIQALHKLAR 373
              + + F+ + L       +K    S         V+  L + D+NT    +  ++L  
Sbjct: 560 SQGQDVRFSEKLLEMGRNFANKIWNASR-------FVMMNLEDFDINTFDVKEVKYELVD 612

Query: 374 E 374
           E
Sbjct: 613 E 613


>gi|251793862|ref|YP_003008594.1| leucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
 gi|247535261|gb|ACS98507.1| leucyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
          Length = 862

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 43/154 (27%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND---- 358
              +  A+  L++          + +K  ++P  LSA               + +D    
Sbjct: 660 ESGVEGAKRFLARVWNLVFEYNKNPTKTAVNPTALSASQKALRRDVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
              NT  AI A+ +L  + T+         A   
Sbjct: 720 QTFNT--AIAAVMELMNKLTRAPLDDEQDRAIMA 751


>gi|296818499|ref|XP_002849586.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
 gi|238840039|gb|EEQ29701.1| isoleucyl-tRNA synthetase [Arthroderma otae CBS 113480]
          Length = 1517

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 58/183 (31%), Gaps = 41/183 (22%)

Query: 267  HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP--------------------APV 306
            H   L+  GRKMSKS GN I  +E++                                  
Sbjct: 1128 HGFTLDQHGRKMSKSIGNTIQPDEIMGGTLLSPLKPKKVKGKGPKPNLEVPIYDALGPDA 1187

Query: 307  IRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLSALY 356
            +RL    + Y + +    Q L    I L K+           Q    K  +    L A+ 
Sbjct: 1188 LRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQGFDPKNEVPYESLYAID 1247

Query: 357  NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQER 416
                   A+  LH L + S +  D +  F A   +       +  N   S    + +++R
Sbjct: 1248 K-----IALLQLHNLVKTSQEAIDKMEFFKAVTAM------NKWANLEFSAFYIEAIKDR 1296

Query: 417  LIL 419
            L  
Sbjct: 1297 LYA 1299


>gi|225857275|ref|YP_002738786.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|254782445|sp|C1CLZ8|SYI_STRZP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225726249|gb|ACO22101.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 930

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA     Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDVVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|222106801|ref|YP_002547592.1| isoleucyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221737980|gb|ACM38876.1| isoleucyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 987

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   +  +GRKMSKS GN I+  ++
Sbjct: 617 DVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVITHGFTMAEDGRKMSKSIGNTISPQDV 676

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA--EILLS---------KWPQT 340
           +           A ++RL ++ T Y     +  QRL +A  +  +          +W   
Sbjct: 677 MAQSG-------ADILRLWVMNTDY-----WEDQRLGKAIIQTNVDAYRKIRNTVRWMLG 724

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +     AL                +  L  L R+S    +   I  A      
Sbjct: 725 TLAHDHGEDIAYEAL------PELEKLMLHRLAELDVLVRDSYDAFEFKKITRALTDFAN 778

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 779 VELSAFYFD 787


>gi|52220888|ref|YP_086757.1| leucyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|222112707|ref|YP_002559294.1| Agrocin 84-resistant leucyl-tRNA synthetase [Agrobacterium
           radiobacter K84]
 gi|41393770|gb|AAS02118.1| probable leucyl-tRNA synthetase [Agrobacterium tumefaciens]
 gi|221728484|gb|ACM31456.1| Agrocin 84-resistant leucyl-tRNA synthetase [Agrobacterium
           radiobacter K84]
          Length = 814

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/149 (15%), Positives = 40/149 (26%), Gaps = 16/149 (10%)

Query: 14  KITEFQ--AIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           +   F      P   + YV    P      HIG+ R   + D L R+         V + 
Sbjct: 18  EKRIFDWDPSSPGK-KFYVLEMFPYTSGHLHIGHVRNYSMGDTLARMQIARGY--SVLHP 74

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--- 126
                        AR+           +  T        +   +L          AT   
Sbjct: 75  MGWDSFGLPAENAARK------FGTHPAKFTQDAIDSMKRSMMQLGFGYSWANELATCSP 128

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            ++     L  ++   G  Y  +  + +D
Sbjct: 129 TYVLAQQKLFLDLYRKGLIYRDDTYVYWD 157



 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 16/113 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLN-LEGRKMSKSNGN 284
           D++ GG++    H       +     +      E    ++ + G +N + GRK SKS GN
Sbjct: 521 DVYIGGIEHATLHLIYSRFITKVLHDLGYIEFDEPFVELY-NQGMVNDVHGRKQSKSLGN 579

Query: 285 FITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK 336
                          + + A  +R   +  T Y  PI++           L +
Sbjct: 580 VT-------DPSVVVQEFGADAVRCYLLFKTTYNAPINWEDSGPQAMRSYLER 625


>gi|33240420|ref|NP_875362.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|33237947|gb|AAQ00015.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 507

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 9/82 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  ++    ++ H GFL  EG KM KS GN +    L
Sbjct: 253 DVHVIGKDILRFHAVYWPAMLMSA-GLDLPHRVFGH-GFLTREGNKMGKSLGNVLDPELL 310

Query: 292 LETKKFGGRSWPAPVIRLAMLM 313
           L+        +    +R  +L 
Sbjct: 311 LD-------KYGEDPVRWYLLS 325


>gi|309973006|gb|ADO96207.1| Methionyl-tRNA synthetase [Haemophilus influenzae R2846]
          Length = 682

 Score = 41.0 bits (95), Expect = 0.43,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   S        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDESLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKSPWVIAK 464


>gi|329850816|ref|ZP_08265661.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
           protein [Asticcacaulis biprosthecum C19]
 gi|328841131|gb|EGF90702.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
           protein [Asticcacaulis biprosthecum C19]
          Length = 442

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/145 (24%), Positives = 54/145 (37%), Gaps = 35/145 (24%)

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV---------SAIQA 367
           R+  D    RL E    L++    +         V + + +DL T           A+  
Sbjct: 195 RDDTDSEFDRLAE---TLNRMLDRNAELVTNLQQVSNDIAHDLRTPLARLQQVLDEALTD 251

Query: 368 LHKLA-------RESTKNHDLLPIFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLI 418
            H  A       R S ++ ++L +FNA   I  IE  K  EH ++     I + V     
Sbjct: 252 AHDAATFRLALTRASERSREILDLFNALLRISEIETLKVREHFSRIDVCEIAERV----- 306

Query: 419 LLKMKKFSSADYIRKQLESKGFILE 443
                    AD  R  LE+KG+ LE
Sbjct: 307 ---------ADAFRPDLEAKGYTLE 322


>gi|298293832|ref|YP_003695771.1| isoleucyl-tRNA synthetase [Starkeya novella DSM 506]
 gi|296930343|gb|ADH91152.1| isoleucyl-tRNA synthetase [Starkeya novella DSM 506]
          Length = 1019

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN +   E++++         A ++RL +
Sbjct: 662 SCGTRGRPPYDVVLTHGFVLDEQGRKMSKSIGNVVAPQEVIKSSG-------ADILRLWV 714

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +    + L        K   T
Sbjct: 715 CASDYSDDLRIGPEILKTTVETYRKLRNT 743


>gi|260102647|ref|ZP_05752884.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083552|gb|EEW67672.1| valine-tRNA ligase [Lactobacillus helveticus DSM 20075]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|158334219|ref|YP_001515391.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|189082976|sp|B0C1R1|SYL_ACAM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|158304460|gb|ABW26077.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 855

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 47/175 (26%), Gaps = 20/175 (11%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              D S  + Y      Y     H+G+ R  ++ DV+ RL R       V          
Sbjct: 26  TPEDTSKPKFYALSMFPYPSGSLHVGHTRNYVITDVIARLKRMQGY--RVLQPMGWDAFG 83

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I      +  T  N  Q  K    L       +  AT   P      
Sbjct: 84  LPAENAA------IARGIHPAEWTYANMAQMKKQLEPLGLSIDWSREIATCS-PDYYRWT 136

Query: 137 Q----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Q      +  G AY+    +              +  ++D +    R   K  +K
Sbjct: 137 QWIFLQFLDMGLAYQKEAAVNWDPVDQT----VLANEQVDNEGRSWRSGAKVERK 187


>gi|94987625|ref|YP_595558.1| methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|94731874|emb|CAJ55237.1| Methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 651

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 12/123 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV DVL R        +   ++    +  +KII+ A           
Sbjct: 14  VNARPHLGHAYSTIVADVLQRFYSILG--EKTFFLTGTDEHGEKIIQAAEA------AGY 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN-NE 151
           +        ++QF     +L         R T+  H   +   +Q+I   G  Y      
Sbjct: 66  STQEFVDSISRQFQNLWPQLNITY-DAFIRTTDLQHKEAVQKFLQHIYDAGDIYFGEFGG 124

Query: 152 IIF 154
              
Sbjct: 125 YYC 127


>gi|317146103|ref|XP_001821294.2| methionyl-tRNA synthetase [Aspergillus oryzae RIB40]
          Length = 574

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   MI+ D+L R  R   GE     +    +   KI + A           
Sbjct: 65  VNAAPHVGHLYTMIIADILKRW-RTLCGETDAQLLTGTDEHGMKIQQAALAAEMDTQAFC 123

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
            ++  T        +D  + A +   +  R T   H   + Y  + +   G+ Y + +E 
Sbjct: 124 DMNYKT-------FEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIYTSKHEG 176

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 177 WYSVSDETFY 186


>gi|238491664|ref|XP_002377069.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220697482|gb|EED53823.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 574

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   MI+ D+L R  R   GE     +    +   KI + A           
Sbjct: 65  VNAAPHVGHLYTMIIADILKRW-RTLCGETDAQLLTGTDEHGMKIQQAALAAEMDTQAFC 123

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
            ++  T        +D  + A +   +  R T   H   + Y  + +   G+ Y + +E 
Sbjct: 124 DMNYKT-------FEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIYTSKHEG 176

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 177 WYSVSDETFY 186


>gi|241068522|ref|XP_002408458.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215492446|gb|EEC02087.1| leucyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 819

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 38/110 (34%), Gaps = 8/110 (7%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  K  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 555 HNNWLYPEEVVKKGNKFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 607

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
             IR  +L  +   + ++++   +      +++      +   +   +  
Sbjct: 608 DAIRFFVLSDSPPEKDLEWSASGIEGCSRFINRLEHMFEAIDSLKDDITE 657


>gi|194227336|ref|XP_001488103.2| PREDICTED: isoleucyl-tRNA synthetase 2, mitochondrial [Equus
           caballus]
          Length = 1012

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN +  + ++   +   +   + A V+R 
Sbjct: 639 SVAARKKAPFKTVVVHGFTLGEKGEKMSKSLGNVVDPDVVINGGQDQSKEPPYGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 699 WVAESNVFTEVTIGPSVLNAARDDISKLRNT 729


>gi|197122748|ref|YP_002134699.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|238689865|sp|B4UEJ9|SYR_ANASK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|196172597|gb|ACG73570.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 598

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 54/334 (16%), Positives = 101/334 (30%), Gaps = 58/334 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D +  LLR+   +    Y  N  D   ++   AR  H     
Sbjct: 133 PT--GPMHVGHGRNAVVGDGVQGLLRWAGFDVTREYYVN--DYGAQVQTLARSVHLRYQE 188

Query: 93  --NDAISIITSKNTQQFVKDTTRLACLAPTHQPR----------------ATNHIPQMI- 133
                +++       ++VKD      L   +  R                A  H+  MI 
Sbjct: 189 LHGRTVTMPPKSYPGEYVKDIAA--GLKAEYGARFLDAPEAEWLTLFRDHAVQHVLGMIR 246

Query: 134 ---YLIQNIILHGHAYEANNEIIFD--TSSIPNY---------GSFSRRKIDEQKMGTR- 178
                +         + +   +           +         G     K  + +   + 
Sbjct: 247 GDLAAVNISFDR---WSSEKALYESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPAQP 303

Query: 179 VPEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FD 232
            P++       D  L++ S    E         G P +   C+ ++ H+  +       D
Sbjct: 304 QPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYF--CADIAYHWDKRQRADALVD 361

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + G       P  E  +     + +      I + +     E  KMSK  G  +++ E++
Sbjct: 362 VLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVV 421

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +              R   L      P+DF V+ 
Sbjct: 422 DEVGR-------DATRFIFLTRRSDAPLDFDVEL 448


>gi|160900816|ref|YP_001566398.1| isoleucyl-tRNA synthetase [Delftia acidovorans SPH-1]
 gi|160366400|gb|ABX38013.1| isoleucyl-tRNA synthetase [Delftia acidovorans SPH-1]
          Length = 951

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 64/200 (32%), Gaps = 25/200 (12%)

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA---- 250
           K +  +E  ++S    G   WH     M   +     D  G   DL    H+        
Sbjct: 554 KSTDILEVWFDS----GSTFWH----VMRGTHADMHHD-QGPEADLYLEGHDQHRGWFHS 604

Query: 251 ---QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
               +           +  H   ++ +G+KMSKS GN +   ++            A +I
Sbjct: 605 SLLLASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVAPQDV-------SNKMGAEII 657

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA 367
           RL +  T Y   +    + L        +   T            +A  + + T   ++ 
Sbjct: 658 RLWVASTDYSGDLGIDDKILARVVDAYRRIRNTLRFLLANVSDFDAA-QDSVPTEELLEI 716

Query: 368 L-HKLARESTKNHDLLPIFN 386
               LAR +    +LL  + 
Sbjct: 717 DRWALARAAQFQAELLAHYK 736


>gi|105893564|gb|ABF76729.1| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
          Length = 800

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 389 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 446

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 447 T------GLNPEWLRYYF 458


>gi|116748008|ref|YP_844695.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
 gi|116697072|gb|ABK16260.1| arginyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
          Length = 559

 Score = 41.0 bits (95), Expect = 0.44,   Method: Composition-based stats.
 Identities = 59/336 (17%), Positives = 102/336 (30%), Gaps = 46/336 (13%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           R   EF + +P+       GP      HIG+ R     D L  +L          Y  N 
Sbjct: 123 RVQVEFVSANPT-------GP-----LHIGHGRGAATGDALANILEACGYAVEREYYIND 170

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA-PTHQPRATNHIPQ 131
                  + R+        + + +    +    +++KD  R           RA   + +
Sbjct: 171 AGNQMDTLGRSLYFRYQEALGEPVEFPDAHYRGEYMKDLARDFLRDNGDRYLRA--PLDE 228

Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK---NP 188
           ++ L              +++     S   +  FS R +  +    R  E  +++     
Sbjct: 229 VLPLFTRFAADRILEGIKDDLGEFGVSFDQW--FSERSLHAEDAIRRTVEDLNRRGFIYE 286

Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI-----FP 243
           ++  +W +ST      E      R        A    Y    +D    G D +       
Sbjct: 287 SEGAVWFKSTAFGD--EKDRVVIRANGVSTYFAADLAYHRNKYD---RGYDKVVDIWGAD 341

Query: 244 HH---ENEIAQSCCADRIEKTANIWIHNGFLNLEGRK---MSKSNGNFITINELLETKKF 297
           HH   E  +A      R  +   I +      L   K   MS   G F+T+ E+++    
Sbjct: 342 HHGYVERMLAGVEALGRNREDLRIVLVQLVNLLRAGKPVAMSTRAGEFVTLREVVDEVGK 401

Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
                     R   L      P+DF    L  A+  
Sbjct: 402 -------DAARFIFLTRRSDSPLDF---DLDVAKAR 427


>gi|323466819|gb|ADX70506.1| Valyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|303248590|ref|ZP_07334846.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
 gi|302490031|gb|EFL49953.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
          Length = 651

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 67/216 (31%), Gaps = 67/216 (31%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPI 320
           +H  +L +   KMSKS GN I    + E     G       +R  +L    R        
Sbjct: 286 VHGYWL-VRDTKMSKSLGNVIEPLAMAEQAGLSG-------MRYFLL----REMVFGSDA 333

Query: 321 DFTVQRL----------------TEAEILLSKWPQTSTSKGIIDPAV--------LSALY 356
            F+ + L                  A  + +K+   +        A           A+ 
Sbjct: 334 SFSDEALIGRFNADLANDLGNLANRALAMTTKYFGGTVPASDAPQAADAELARLGREAMA 393

Query: 357 NDLN------TVSAIQALHKLARESTKNHDLLP---IFNA---------SAHIL-GIEVC 397
           N +          A++AL +L R   K  D +    +F            A +L G+   
Sbjct: 394 NFVQLFGAAQFSRALEALWELVRGLNKYIDAMAPWTLFKEGDTARLGTVMATVLGGLRQV 453

Query: 398 KEHLNKNISIAIEKLVQE-------RLILLKMKKFS 426
              L   +  A EKL+ +         +  + + F+
Sbjct: 454 AVCLLPVMPEAAEKLLAQLGQETAGLNLAKEAENFA 489



 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 38/125 (30%), Gaps = 16/125 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D L R       E  V ++    +  DKI E A++         
Sbjct: 13  VNAKPHLGHAYTTIVVDALARFHALLGEE--VFFLTGTDEHGDKIAEAAQK------AGQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEAN- 149
                    +  F     +L   AP    R T+  P     ++     +   G  Y    
Sbjct: 65  TPKEYADSISGLFSSLWPKLGI-APRRFIRTTD--PDHKEAVKKALQLVYDKGDIYFGEY 121

Query: 150 NEIIF 154
                
Sbjct: 122 GGHYC 126


>gi|295093793|emb|CBK82884.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Coprococcus sp. ART55/1]
          Length = 805

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 24/162 (14%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E       H   L   G KMSKS GN +  +++++             I    L      
Sbjct: 568 EPYQKRTSHGMILGENGEKMSKSRGNVVNPDDIVDVYGADTLRTYEMFIGAFDLAAS--- 624

Query: 319 PIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YNDL-----NTVS 363
              ++   +      L +      + T +      + + +        ND      NT  
Sbjct: 625 ---WSEDGVKGCRRFLDRVWKLQDSVTDEKGYSKDMETKMHQVIKKVSNDFENLKYNT-- 679

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           AI A+  L  +  K   +      +  IL +     H+ + +
Sbjct: 680 AIAAMMALLNDFYKKGSVTADEFKTLLIL-LNPVAPHITEEL 720


>gi|229118509|ref|ZP_04247863.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228665079|gb|EEL20567.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 544

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE  ++        I  K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QEGVTVV------EIADKYHEEFERCFHSLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|227113133|ref|ZP_03826789.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 676

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L      +     A    + ++      A   I+ + ++   ++++  
Sbjct: 400 INKRFDGKLADKLADAELYKTFTDAATSIAEAYNNRESGRAIREIMALADIANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|224823411|ref|ZP_03696520.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
 gi|224603866|gb|EEG10040.1| leucyl-tRNA synthetase [Lutiella nitroferrum 2002]
          Length = 872

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 33/217 (15%), Positives = 69/217 (31%), Gaps = 27/217 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R+      V                A +         A +  
Sbjct: 49  HMGHVRNYTITDVLARFKRFQGYN--VLQPMGWDAFGLPAENAAMKSGG------APAAW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYLIQNIILHGHAYEANNEIIFD 155
           T  N     K    L       +  AT        +       +   G  Y+ N  + +D
Sbjct: 101 TYANIDYMKKQLDSLGFALDWERELATCKPDYYRWEQWLFT-KLFEKGVIYKKNGVVNWD 159

Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPMEPGWESPWGRGRPG 214
                ++   +  ++ + +          ++ P   F + + +  +    ++       G
Sbjct: 160 P---VDHTVLANEQVIDGRGWRSGALVEKREIPMYYFAITQYADELLTSLDTLD-----G 211

Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           W  +   M  +++GK F     G +++FP+ E  +  
Sbjct: 212 WPEQVKTMQKNWIGKSF-----GAEIVFPYDEASVGH 243



 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 53/161 (32%), Gaps = 39/161 (24%)

Query: 262 ANIWIHNGFLNLEG-RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREP 319
           A   +    + + G  KMSKS  N +   E +E        + A   RL M+      + 
Sbjct: 616 ATHRVDGQPVTVGGIEKMSKSKNNGVDPQEFIE-------KYGADTARLFMMFAAPPEQS 668

Query: 320 IDFTVQRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND 358
           ++++   +  A   L +  +            +   G +D  +          +  + +D
Sbjct: 669 LEWSDAGVEGAFRFLKRLWKVVKDHADGGVVAAYRGGELDAGLKELRFKLHGTIQKVADD 728

Query: 359 ------LNTVSAIQALHKLARESTKNHDLLPIFNASA-HIL 392
                  NT  AI A+ +L     K         A A  +L
Sbjct: 729 YGRRQQFNT--AIAAVMELLNTYDKADRSSDAGRAVAQEVL 767


>gi|161507301|ref|YP_001577255.1| valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160348290|gb|ABX26964.1| Valyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|110833320|ref|YP_692179.1| isoleucyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|123345796|sp|Q0VSE1|SYI_ALCBS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110646431|emb|CAL15907.1| Isoleucyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 937

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN I   E+            A ++RL +  T YR  +  +   
Sbjct: 592 HGFTVDEHGRKMSKSVGNVIAPQEV-------WNDLGADILRLWVCATDYRGEMSVSKDI 644

Query: 327 LTEAEILLSKWPQTST 342
           L +      +   TS 
Sbjct: 645 LKQMGDSYRRIRNTSR 660


>gi|78778625|ref|YP_396737.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
 gi|123554705|sp|Q31CU4|SYI_PROM9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|78712124|gb|ABB49301.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
          Length = 968

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 57/153 (37%), Gaps = 10/153 (6%)

Query: 193 LWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
           LWK+ T  M+  ++S        W   C       L    D++  G D      ++ +  
Sbjct: 545 LWKKGTDTMDVWFDSG-----SSWAAVCE--QRSELKYPADLYLEGSDQHRGWFQSSLLT 597

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET--KKFGGRSWPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN +  N ++     K    ++ A V+RL
Sbjct: 598 SVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGNNKKIEPAYGADVLRL 657

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   T+ 
Sbjct: 658 WVSSVDYSVDVPIGSNILKQLSDVYRKVRNTAR 690


>gi|18312411|ref|NP_559078.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|60390730|sp|Q8ZXT6|SYL_PYRAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
          ligase; Short=LeuRS
 gi|18159866|gb|AAL63260.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 945

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)

Query: 22 DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
           P   + +V     Y     HIG+ R  ++ DVL R  R+  
Sbjct: 30 RPGAAKFFVTAAYPYPNGAIHIGHGRTYLIADVLARFHRHMG 71



 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 30/176 (17%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
                D    G DLI  H    I         EK     + NG++  EG KMSKS  N +
Sbjct: 588 FWYPLDSRNSGKDLIPNHLTFFIFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVL 647

Query: 287 TINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFT-VQRLTEAEILLS------KWP 338
            +++ ++        +    +R  + +     + +DF   + +  A+ L+S      +  
Sbjct: 648 PLDKAVDM-------YGPDPLRATLAITAEVEQDLDFRHAEAIRNAQQLMSIYSLAQRLA 700

Query: 339 QTSTSKGI--IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           QT+  +    +D  ++S           I  + + ARE+   ++ + +  A+  +L
Sbjct: 701 QTAEDRSPNWLDKWLVSE----------IALVLERAREA---YEKVRVRQAAVEVL 743


>gi|319947480|ref|ZP_08021712.1| isoleucine--tRNA ligase [Streptococcus australis ATCC 700641]
 gi|319746420|gb|EFV98681.1| isoleucine--tRNA ligase [Streptococcus australis ATCC 700641]
          Length = 930

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 66/186 (35%), Gaps = 35/186 (18%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS-AIQA--- 367
                   +  ++  L++      K   T           L A  +D N    A+     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFNPAEDAVAYEEL 674

Query: 368 -------------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL- 412
                        L K  R++  N + L I+ A  + + +++   +L+    +  IE   
Sbjct: 675 RSVDKYMTIRFNQLVKTIRDAYANFEFLTIYKALVNFINVDLSAFYLDFAKDVVYIESAK 734

Query: 413 -VQERL 417
            ++ R 
Sbjct: 735 SLERRQ 740


>gi|327183314|gb|AEA31761.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|317178659|dbj|BAJ56447.1| methionyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 650

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAASKMD 139


>gi|295692675|ref|YP_003601285.1| valyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030781|emb|CBL50260.1| Valyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|295692078|ref|YP_003600688.1| methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
 gi|295030184|emb|CBL49663.1| Methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
          Length = 658

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 34/119 (28%), Gaps = 11/119 (9%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNA   I  D + R  R    +   T+    TD         + E  +           
Sbjct: 22  IGNAYTTIAADTMARYKRSQGYD---TFFLTGTD-----EHGLKIEQKAEAQGIKPQEFV 73

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            K    + K    L         R T+  H+  +  + + ++  G  Y       +   
Sbjct: 74  DKMAASYKKLWKSLNISY-DKFIRTTDEQHVQAVQKIFEKLLKKGDIYLGEYTGWYSVE 131


>gi|222636480|gb|EEE66612.1| hypothetical protein OsJ_23192 [Oryza sativa Japonica Group]
          Length = 960

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 29/174 (16%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  + +++H    + EGRKMSK+ GN I   + +       + +    +R  + M 
Sbjct: 565 FTGTVPFSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTI-------KEYGTDALRFTLSMG 617

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSA----LYNDLNTVSAIQA- 367
              + ++ + +RLT  +   +K         + + D +  +A    L N  +T +++Q  
Sbjct: 618 TAGQDLNLSTERLTSNKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDTEASLQKL 677

Query: 368 ----------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
                     LH+L    + ++D     +A+  I                 IE 
Sbjct: 678 PLPESWVVTGLHELIDRVSTSYDKFFFGDAAREI-----YDFFWGDFADWYIEA 726


>gi|220931770|ref|YP_002508678.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|254782408|sp|B8CWL4|SYI_HALOH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|219993080|gb|ACL69683.1| isoleucyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 929

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 44/95 (46%), Gaps = 8/95 (8%)

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           N    +  A   +      + NGF+  + G KMSKS GN ++  +++       + + A 
Sbjct: 570 NSSLLTAVATEGKPPYEAVVTNGFVVDDKGNKMSKSIGNVVSPQDVI-------KRYGAD 622

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           ++RL +  +++++ +  + + L +   +  +   T
Sbjct: 623 ILRLWVASSNFKDDVRVSDRILKQNSEVYRRIRNT 657


>gi|254443440|ref|ZP_05056916.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198257748|gb|EDY82056.1| methionyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 512

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 13/99 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++ P H         A  IE  +++ +H G+ ++ G KMSKS GNFI  +E + 
Sbjct: 253 HVIGKDILVPPHAVYWPIMLKAIGIEIPSSLLVH-GWWSINGEKMSKSTGNFIEPSEFV- 310

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYREPIDFTVQRLTE 329
                 + +    +R  +   +     +  DF+ +  T 
Sbjct: 311 ------KEYSVDALRYFLIREMSVG--QDSDFSDELFTN 341



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 11/113 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   ++ DV+ R  R    E     V  +T ID+      + +  +         
Sbjct: 17  PHLGHAYEKVLTDVVARFRRLMGDE-----VYFLTGIDEH---GQKVQQSAAKRGIEPIE 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
           +  +   QF +    L         R T   H   +  ++Q++   G  Y+A 
Sbjct: 69  LCDEAAGQFQELCESLEISNDDF-IRTTETRHKDVVRSILQDLFDRGEIYKAE 120


>gi|182684601|ref|YP_001836348.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|303258589|ref|ZP_07344569.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|303262676|ref|ZP_07348616.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|303263616|ref|ZP_07349538.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
 gi|303266377|ref|ZP_07352266.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|303268250|ref|ZP_07354048.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|259511515|sp|B2IRR4|SYI_STRPS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|182629935|gb|ACB90883.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
 gi|301802362|emb|CBW35116.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae INV200]
 gi|302636232|gb|EFL66727.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
 gi|302640090|gb|EFL70545.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
 gi|302642201|gb|EFL72550.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS458]
 gi|302644077|gb|EFL74335.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS457]
 gi|302646654|gb|EFL76879.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS397]
          Length = 930

 Score = 41.0 bits (95), Expect = 0.45,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA     Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDVVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|315038034|ref|YP_004031602.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
 gi|312276167|gb|ADQ58807.1| valyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|294675814|ref|YP_003576429.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294474634|gb|ADE84022.1| leucyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 851

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 16/171 (9%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            DP+  + YV    P      H+G+ R   + DV+ R          V +          
Sbjct: 27  RDPARPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARYKMSCGF--SVLHPMGWDAFGMP 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
               A +              T  N          L       +  AT    +  Q   +
Sbjct: 85  AENAAIERGGH------PKDWTYSNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAM 138

Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
             +++  G  Y  N  + +D   +      +  ++++ +          K+
Sbjct: 139 FLDMLEAGLVYRKNAVVNWDPVDMT---VLANEQVEDGRGWRSGALVERKE 186


>gi|221232397|ref|YP_002511550.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|298230124|ref|ZP_06963805.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
           MDR_19F]
 gi|298503404|ref|YP_003725344.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
 gi|254782443|sp|B8ZM55|SYI_STRPJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|220674858|emb|CAR69433.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
 gi|298238999|gb|ADI70130.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
          Length = 930

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA     Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDVVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|170078363|ref|YP_001735001.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
 gi|169886032|gb|ACA99745.1| isoleucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
          Length = 963

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 6/139 (4%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L    D++  G D      ++ +  S   + +     +  H   L+ +G KMSKS GN +
Sbjct: 560 LNYPVDLYLEGSDQHRGWFQSSLLTSVAVNNVAPYKTVLTHGFVLDEKGYKMSKSLGNVV 619

Query: 287 TINELLETKKF--GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
             N ++   K       + A V+RL +    Y   +      L +   +  K   T+   
Sbjct: 620 DPNIIINGGKNQKTEPPYGADVLRLWVSSVDYSSDVPIGQTILKQLADVYRKIRNTARFL 679

Query: 343 --SKGIIDPAVLSALYNDL 359
             +    DPA  +  Y+DL
Sbjct: 680 LGNIHDFDPAKDAVAYSDL 698


>gi|167769712|ref|ZP_02441765.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
 gi|167668073|gb|EDS12203.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
           17241]
          Length = 690

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 42/127 (33%), Gaps = 13/127 (10%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG++   +  DV+ R  R    +     V  +T  D+      + E  ++      
Sbjct: 51  DKLHIGHSYCTVATDVMARYKRMQGFD-----VMFLTGTDEH---GQKIEQKALAAGVTP 102

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--NEI 152
                K      +    L         R T+  H+  +  + +++   G+ Y+ +   + 
Sbjct: 103 QAYVDKIVDGIKELWNLLNISN-DRFVRTTDDYHVESVQKIFKDLYDKGYIYKGSYKGKY 161

Query: 153 IFDTSSI 159
                S 
Sbjct: 162 CTPCESF 168


>gi|148255487|ref|YP_001240072.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|146407660|gb|ABQ36166.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 722

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D + R  R     K V ++    +   K+++ A+ E        
Sbjct: 222 PNGNPHIGHAYEAIATDAIARFARLDG--KDVFFLTGTDEHGLKMVQTAQNEGL------ 273

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               + ++N  +F     RL   +     R T   H   +  +   ++ +G  Y      
Sbjct: 274 TPGELATRNAGRFRDMDERLNV-SFDRFIRTTEPAHHKSVQAIWNRMLENGDIYADTYAG 332

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 333 WYSVRDEAYY 342



 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  +     ++ H GFL   G KMSKS GN +     
Sbjct: 464 DVHVIGKDIIRFHAVYWPAFLMSA-GVPVPKRVYAH-GFLFNRGEKMSKSVGNVV----- 516

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                     +    +R   L
Sbjct: 517 --DPFNLADQYGVDQLRYFFL 535


>gi|332296159|ref|YP_004438082.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
 gi|332179262|gb|AEE14951.1| Valyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
          Length = 875

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 9/96 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S      E   N+ IH    + +GRKMSKS GN I   +++E          A  +R
Sbjct: 494 IMMSIALTGKEPFKNVIIHGLVRDSQGRKMSKSVGNVIDPMDIIEESG-------ADALR 546

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            ++  L     + I  + +++  A    +K   T+ 
Sbjct: 547 FSLASLSNPAGQDIKMSKEKVKGARNFANKLWNTAR 582


>gi|307069628|ref|YP_003878105.1| putative leucyl-tRNA synthetase [Candidatus Zinderia insecticola
          CARI]
 gi|306482888|gb|ADM89759.1| putative leucyl-tRNA synthetase [Candidatus Zinderia insecticola
          CARI]
          Length = 807

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
          Y C    Y     HIG+ R  I+ D+L+R          +  
Sbjct: 33 YTCSMIPYPSGKLHIGHLRNYIINDILFRYYNMKKYNTLMFM 74


>gi|293610316|ref|ZP_06692617.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292827548|gb|EFF85912.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 874

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + + S     ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVASFLEKSNQASTIDAANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   S K     ++D+     A   +L +  
Sbjct: 744 IAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA 780


>gi|56964386|ref|YP_176117.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822070|sp|Q5WEQ4|SYV_BACSK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56910629|dbj|BAD65156.1| valyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 880

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 48/133 (36%), Gaps = 11/133 (8%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ P D   W++   +   W S   W     GW  E +     Y      +   G D+I
Sbjct: 432 GKEPPRDSENWRQDEDVLDTWFSSALWPFSTMGWPDEEAPDYKRYYPTN--VLVTGYDII 489

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
                  I Q           ++ IH    + EGRKMSKS GN +   E+++        
Sbjct: 490 AFWVSRMIFQGKAFTGQRPFKDVLIHGLIRDAEGRKMSKSLGNGVDPQEVID-------K 542

Query: 302 WPAPVIRLAMLMT 314
           + A  +R  +   
Sbjct: 543 YGADSLRFFLATG 555


>gi|329119551|ref|ZP_08248235.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464338|gb|EGF10639.1| methionine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 691

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 67/201 (33%), Gaps = 43/201 (21%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 303 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVFAH-GFLTVDGQKMSKSRGTFITAKSYLE 360

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                 +      +R  +                  A  L SK      +        +S
Sbjct: 361 ------QKLNPEWMRYYI------------------AAKLNSKIEDIDLNL----QDFIS 392

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP--IFNASAHILGIEVCKEHLNKNISIAIEK 411
            + +DL        + K    + +    +      +   + G  + K+   +  S  I  
Sbjct: 393 RVNSDL--------VGKYVNIAARASGFIAKRFEGSLKDVSGSALLKKLAAE--SETIAA 442

Query: 412 LVQERLILLKMKK-FSSADYI 431
             +ER     ++   + AD +
Sbjct: 443 AYEEREYARALRDIMALADAV 463


>gi|319776160|ref|YP_004138648.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|329123331|ref|ZP_08251896.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
 gi|317450751|emb|CBY86971.1| methionyl-tRNA synthetase [Haemophilus influenzae F3047]
 gi|327471331|gb|EGF16783.1| methionyl-tRNA synthetase [Haemophilus aegyptius ATCC 11116]
          Length = 682

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDETLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|314933369|ref|ZP_07840734.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653519|gb|EFS17276.1| isoleucine--tRNA ligase [Staphylococcus caprae C87]
          Length = 916

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 38/127 (29%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL        P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQT 340
           L +   +  K   T
Sbjct: 638 LKQTSDVYRKIRNT 651


>gi|305664281|ref|YP_003860569.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378850|gb|ADM28689.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 997

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 22/132 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII------------ 80
           PT   F H+G+AR     DV+ R +R          V +    D + +            
Sbjct: 55  PTANGFMHVGHARGRTFKDVMLRYMRMKGYC-----VWDQAGWDTQGLPVELEVERNLRI 109

Query: 81  --ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYL 135
             ++  + +           +       + K + RL         ++ R   +I  + + 
Sbjct: 110 KTKKDIETYGVENFVRECQKLVDYYIDSWRKASIRLGLWLDYDNAYETRNPRYIEAVWHF 169

Query: 136 IQNIILHGHAYE 147
           ++++   G+ YE
Sbjct: 170 LKSMWDRGYLYE 181


>gi|195402937|ref|XP_002060056.1| GJ15519 [Drosophila virilis]
 gi|194141854|gb|EDW58267.1| GJ15519 [Drosophila virilis]
          Length = 870

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R           +N+             E+ +   
Sbjct: 71  PYPSGNLHMGHVRVYTISDAVARFQRMCG--------KNVFQPIGWDSFGLPAENAANQR 122

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEA 148
             A +  T +N  Q  +   RL C        +T+  PQ     Q+    +  HG AY+ 
Sbjct: 123 GVAPADWTQQNIAQMKQQLERLGCSFDWAHELSTSS-PQYYRWTQSLFLMLHKHGLAYQN 181

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D      R   K  KK
Sbjct: 182 EALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|197120433|ref|YP_002132384.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
 gi|196170282|gb|ACG71255.1| isoleucyl-tRNA synthetase [Anaeromyxobacter sp. K]
          Length = 946

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           +  W+S        W    + +    L    D++  G D       + +  S        
Sbjct: 568 DVWWDSGV-----SW---AAVIEREGLELPVDLYLEGSDQHRGWFHSSLLTSMALRGAAP 619

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
              +  H   L+  G+ MSKS GN I  +E++       + + A ++RL +  + YR+ I
Sbjct: 620 YRAVLTHGFILDQHGKAMSKSAGNGIEPSEII-------KKYGADILRLWVSASDYRDDI 672

Query: 321 DFTVQRLTEAEILLSKWPQTST-SKGIID 348
               Q L        K   T   + G +D
Sbjct: 673 GLGDQILAGLAEGYRKIRNTIRYALGALD 701



 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 21/141 (14%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID----------DKI 79
           GP  Y     HIG+A   I+ DV+ +                I   D          DK 
Sbjct: 58  GP-PYANGDIHIGHALNKILKDVVVKYRNLNGEVADY-----IPGWDCHGLPIELKVDKE 111

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
           +   ++E     I +A      K  ++  +   RL        P AT    +  +++   
Sbjct: 112 LGPKKRELDRPAIIEACRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRTF 171

Query: 137 QNIILHGHAYEANNEIIFDTS 157
                 G  Y     + +  +
Sbjct: 172 ARAAEKGFLYRGKKPVYWCIT 192


>gi|134300393|ref|YP_001113889.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134053093|gb|ABO51064.1| valyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.46,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 12/88 (13%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
            E    ++IH   L+  GRKMSKS GN +   +++E+         A  +R  ++  +  
Sbjct: 507 EEPFKEVFIHGLVLDSLGRKMSKSLGNGVDPLDIIESHG-------ADSLRFMLITGN-- 557

Query: 318 EP---IDFTVQRLTEAEILLSKWPQTST 342
            P   + F  +RL  A    +K    S 
Sbjct: 558 TPGNDLRFHFERLDGARNFANKLWNASR 585


>gi|325956486|ref|YP_004291898.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
 gi|325333051|gb|ADZ06959.1| valyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
          Length = 879

 Score = 41.0 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + QS          ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMMFQSLHFTGKRPFNDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|314936231|ref|ZP_07843578.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654850|gb|EFS18595.1| valine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 876

 Score = 41.0 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 16/164 (9%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ PAD   W +   +   W S   W     GW  E +    HY      +   G D+I
Sbjct: 427 GEEAPADIENWTQDEDVLDTWFSSALWPFSTLGWPNEEAKDYQHYYPTN--VLVTGYDII 484

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ +H      +GRKMSKS GN +   +++E        
Sbjct: 485 FFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIE-------K 537

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 538 YGADSLRYFLATGS--SPGNDLRYSTEKVESVWNFINKIWNGAR 579


>gi|284048773|ref|YP_003399112.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283952994|gb|ADB47797.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 650

 Score = 41.0 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 11/121 (9%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             HIG+A    + D + R  R    +     V+ IT  D+  ++    +  +        
Sbjct: 18  DLHIGHAYCTTIADTIARYKRANGFD-----VQFITGSDEHGLK---IQRKAESFGVKPI 69

Query: 98  IITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
             T K    F K    L     T   R +   H   +  L+Q +   G  Y+ + E ++ 
Sbjct: 70  EYTDKIVADFKKLWEMLGVSY-TSFVRTSSPEHEKTVQTLLQKVWEQGDIYKKDYEGLYC 128

Query: 156 T 156
            
Sbjct: 129 V 129


>gi|108801230|ref|YP_641427.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119870381|ref|YP_940333.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126437210|ref|YP_001072901.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
 gi|108771649|gb|ABG10371.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
 gi|119696470|gb|ABL93543.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
 gi|126237010|gb|ABO00411.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
          Length = 515

 Score = 41.0 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 21/130 (16%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+A   I  D + R  R    +     VR +T  D   +   +    +  +  
Sbjct: 14  PNGDPHVGHAYEYIATDAIARFKRLDGYD-----VRYLTGTD---VHGQKMAETATALGV 65

Query: 95  AISIITSKNTQQFVKDTTRLAC-------LAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
            ++ +  +N+  F +   +L          + T   RA+  I       Q +   G  Y 
Sbjct: 66  PVADLARRNSDVFQRLQEKLNISFDRFIRTSDTDHYRASEDIW------QRMNAAGDIYL 119

Query: 148 ANNEIIFDTS 157
                 +   
Sbjct: 120 DAYSGWYSVR 129


>gi|15791020|ref|NP_280844.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236770|ref|YP_001689970.1| isoleucyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|74568871|sp|Q9HN97|SYI_HALSA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|10581609|gb|AAG20324.1| isoleucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727836|emb|CAP14624.1| isoleucine--tRNA ligase [Halobacterium salinarum R1]
          Length = 1070

 Score = 41.0 bits (95), Expect = 0.47,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 71/183 (38%), Gaps = 32/183 (17%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H      +GR MSKS G  I  NE+++        + A  +R+ +L 
Sbjct: 583 AALGDVPYEEVLMHGYANMPDGRGMSKSKGITIEPNEVID-------EYGADPMRMFLLS 635

Query: 314 -THYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSAL--YN------- 357
            T   + + F+       +  L+      ++P+   +    D  V +A    +       
Sbjct: 636 VTPQGDDMSFSWDETENMQRDLNILWNVFRFPRPYMALDDFDANVPAAFGGDDAGVGIAD 695

Query: 358 -DLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
            DL TV    +  L  +  ++T + +      A   +L      E + +++S    ++V+
Sbjct: 696 ADLETVDEWLLSRLQHVKADATAHWEDFEQHRALDAVL------EFVVEDLSRYYVQVVR 749

Query: 415 ERL 417
           ER+
Sbjct: 750 ERM 752


>gi|299536132|ref|ZP_07049446.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728407|gb|EFI68968.1| isoleucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 924

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 12/106 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G+D       + +A S          N+      L+  G+KMSKS GN +   EL
Sbjct: 544 DVVIEGIDQTRGFFYSLLAVSTLFTGKPPYKNVLSLGHVLDEHGQKMSKSKGNALEPVEL 603

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILL 334
           +E        + A  +R A L+     P +   F+ + + +A+  L
Sbjct: 604 IE-------EYGADALRWAFLVDS--SPWNPKRFSKKVVLDAKSKL 640


>gi|218199135|gb|EEC81562.1| hypothetical protein OsI_25003 [Oryza sativa Indica Group]
          Length = 958

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 64/174 (36%), Gaps = 29/174 (16%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  + +++H    + EGRKMSK+ GN I   + +       + +    +R  + M 
Sbjct: 563 FTGTVPFSYVYLHGLIRDSEGRKMSKTLGNVIDPLDTI-------KEYGTDALRFTLSMG 615

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSA----LYNDLNTVSAIQA- 367
              + ++ + +RLT  +   +K         + + D +  +A    L N  +T +++Q  
Sbjct: 616 TAGQDLNLSTERLTSNKAFTNKLWNAGKFLLQNLPDRSDATAWDVLLANKFDTEASLQKL 675

Query: 368 ----------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
                     LH+L    + ++D     +A+  I                 IE 
Sbjct: 676 PLPESWVVTGLHELIDRVSTSYDKFFFGDAAREI-----YDFFWGDFADWYIEA 724


>gi|197294728|ref|YP_001799269.1| glutaminyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171854055|emb|CAM12028.1| Glutaminyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 543

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 60/169 (35%), Gaps = 35/169 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    F H+G+AR +I   + + L +++ G+  + Y       DD           + P 
Sbjct: 36  PEPNGFLHLGHARAII---INFELAKFFNGKTYLRY-------DD-----------TNPN 74

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
           N+             ++D T L    P     A+++  QM      +I  GHAY  +   
Sbjct: 75  NEK-----QVYVDAILQDITWLGYK-PDKITFASDYFDQMFEKALFLIQQGHAYVDDLSA 128

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
              T          R  + E+   +R  E+  + N   FI  K     E
Sbjct: 129 EEIT-------KL-RGNLLEKGTNSRCRERSIEDNKKLFIEMKEGKFAE 169


>gi|83319739|ref|YP_424360.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
 gi|109895004|sp|Q2SSA3|SYR_MYCCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|83283625|gb|ABC01557.1| arginyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
           ATCC 27343]
          Length = 554

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT   + H+G+AR  ++  VL  L +    +    Y  N  D  ++I   A         
Sbjct: 125 PT--GYLHVGHARNAVIGSVLVNLFKKAGYKVQTEYYVN--DAGNQINVLAVTVFVHYLQ 180

Query: 91  PINDAISIITSKNTQQFVKDTTR 113
            +N       +    +   D  +
Sbjct: 181 ALNIDAKKPENCYAGEMYDDLAK 203


>gi|67459043|ref|YP_246667.1| leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536521|sp|Q4ULS1|SYL_RICFE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|67004576|gb|AAY61502.1| Leucyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 835

 Score = 40.6 bits (94), Expect = 0.47,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 69/208 (33%), Gaps = 49/208 (23%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  +  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNEFFHKESNNRVVQGRIEKMSKSKKNLIDLVTMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             IRL +L  +   + ++++   +      ++K      +        +++L +D+N+  
Sbjct: 623 DAIRLFVLSDSPPEKDLEWSASGIEGCSRFINKLEHMFEA--------IASLIDDVNS-- 672

Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
                     E  K  + L  F                 K+++  I+  V  R I     
Sbjct: 673 ----------EINKELNRLVHFTI---------------KHVADDIKHFVLNRAIARMR- 706

Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNG 451
               ++ I  +L      + D K    G
Sbjct: 707 --ELSNAISAELNK---EVVDVKTVRYG 729


>gi|325911859|ref|ZP_08174263.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
 gi|325476365|gb|EGC79527.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 143-D]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|319892187|ref|YP_004149062.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161883|gb|ADV05426.1| Isoleucyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464712|gb|ADX76865.1| isoleucine-tRNA ligase [Staphylococcus pseudintermedius ED99]
          Length = 915

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R+E  +    D
Sbjct: 64  HMGHALNKILKDFINRYKTMQGFYTPYVPGWDTHGLP-IEQALTKKGVKRKEMTTAEFRD 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +      KD  RL        P  T    +    I L   +   G  Y+    
Sbjct: 123 KCQAFAMEQIDIQKKDFLRLGVNGDFDNPYITLKPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 36/92 (39%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S           +  H   ++ EG+KMSKS GN I  + +++ K        A + R
Sbjct: 567 ITTSVATRGRSPYKMLLSHGFVMDGEGKKMSKSLGNVIVPDTIVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +    Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSVDYLADVRISDEILNQVADVYRKIRNT 651


>gi|312142763|ref|YP_003994209.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
 gi|311903414|gb|ADQ13855.1| arginyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
          Length = 553

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 23/171 (13%), Positives = 47/171 (27%), Gaps = 46/171 (26%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS--- 89
           PT     H+G++R  +V DV   ++     +    Y  N  D  +++   A         
Sbjct: 137 PT--GPLHVGHSRGAVVGDVCASIMEAAGYDVEREYYIN--DAGNQMDILAESTLLRYRE 192

Query: 90  -----------IPINDAISIITSKNTQQF----------------------------VKD 110
                      +   D +  I     Q++                             +D
Sbjct: 193 ICGKEIKLPEDVYAGDYVIEIAEDLYQEYGRDILEEEEQKQLDICREFAYQDMLQKIKED 252

Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
             +            T H  ++   +  +   G+ YE    + F +S   +
Sbjct: 253 LNKFGIEFDNWFSERTLHPAKINEAVDVLRDKGYIYEEEAALWFKSSEFGD 303


>gi|308184777|ref|YP_003928910.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
 gi|308060697|gb|ADO02593.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
          Length = 650

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|303255981|ref|ZP_07342009.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
 gi|302597040|gb|EFL64158.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae BS455]
          Length = 930

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 62/160 (38%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA     Y+ L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDVVAYDKLRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|224476295|ref|YP_002633901.1| isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254782437|sp|B9DPP7|SYI_STACT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|222420902|emb|CAL27716.1| putative isoleucyl-tRNA synthetase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 915

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 37/92 (40%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +           +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGQSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQIVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +    Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSVDYLSDVRISDEILKQTADVYRKIRNT 651



 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R+E P      
Sbjct: 64  HMGHALNKILKDFIVRYKSMQGYYSPYVPGWDTHGLP-IEQALTKKGVKRKEMPISEFRK 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 LCEEFALEQIDIQKKDFKRLGVNGDFNDPYITLKPEYEAAQIRLFGEMADRGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|309389003|gb|ADO76883.1| Isoleucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 931

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +   + +     +  +   ++ +G KMSKS GN ++ +++++        + A ++RL +
Sbjct: 577 AVATEGVAPYREVITNGFTVDKKGNKMSKSKGNVVSPHKVID-------QYGADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + ++  I  +   L ++     +   T
Sbjct: 630 ASSDFKNDIRVSDNILKQSSEAYRRIRNT 658


>gi|291485466|dbj|BAI86541.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 804

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ +         A  +RL  M M   
Sbjct: 557 KEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W       G ++  ++ 
Sbjct: 610 DASIAWSESGLDGARRFLDRVWRLFIEDSGELNGKIVE 647


>gi|269962055|ref|ZP_06176409.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
 gi|269833139|gb|EEZ87244.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
          Length = 686

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L  +          ++    + +  +L         I  I    + 
Sbjct: 394 SRNAGFISKRFEGKLAENFAEPELY---NEFVAAADRIAELYETREFGRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 451 ANQYVDE 457


>gi|168488627|ref|ZP_02712826.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|183572601|gb|EDT93129.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP195]
 gi|332072488|gb|EGI82971.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
          Length = 930

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA     Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDVVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|148993770|ref|ZP_01823197.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
 gi|147927726|gb|EDK78750.1| isoleucyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
          Length = 930

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L++      K   T      +    +PA     Y++L +V     
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLRFLIANTSDFNPAQDVVAYDELRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
           +      K  R++  + + L I+ A  + + +++   +L+
Sbjct: 683 IRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|148285047|ref|YP_001249137.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|146740486|emb|CAM81042.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 511

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 56/161 (34%), Gaps = 13/161 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ DV  R +R    E     V  +T  D+      + E  +     
Sbjct: 14  VNDIPHIGHAYTSILADVYARFMRLLGKE-----VIFLTGTDEH---GQKVEKAASNAGV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      K    FVK +  L  L+     R T+  HI  +  L   +   G  Y      
Sbjct: 66  SPKEFVDKIASSFVKLSVDLN-LSNDDFIRTTDTRHIKAVQKLWNILKQQGDIYLGKYCG 124

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
            +       + S S    D  K  T    ++ +++   F L
Sbjct: 125 WYAI-KDEAFYSESELTTD-GKAPTGAEVEWVEESSYFFAL 163


>gi|87125070|ref|ZP_01080917.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
 gi|86167390|gb|EAQ68650.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9917]
          Length = 969

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 600 SVAVNGHAPYRTVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   T+ 
Sbjct: 660 WVSSVDYSADVPIGAGILRQLADVYRKVRNTAR 692


>gi|330834022|ref|YP_004408750.1| glutamyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
 gi|329566161|gb|AEB94266.1| glutamyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
          Length = 565

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 39/119 (32%), Gaps = 25/119 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+GNAR  I       L   Y       ++    D D KI +  ++ +  I  
Sbjct: 102 PNPDGPIHLGNARAAI-------LSAEYAAMYNGKFILRFDDTDPKIKKPLKEAYDWIK- 153

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
            + +  +     ++F                +A+  +     + + ++  G+AY     
Sbjct: 154 -EDLKWLGIDWEKEF----------------KASERMEVYYEVSKIMLEKGYAYVDLGS 195


>gi|221505659|gb|EEE31304.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii VEG]
          Length = 976

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITI 288
           D+H  G D+++ H         C               +GF+   +G KMSKS GN +  
Sbjct: 525 DVHIIGKDIVWFH----TVIWPCMLMAADLPLPKCVFGHGFVTAADGEKMSKSLGNVVDP 580

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N++L+          A   R  ++  T +   + F    LT 
Sbjct: 581 NDILQAH-------DADSFRFYLVRETKFGSDLRFDEDALTA 615


>gi|221484363|gb|EEE22659.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
          Length = 976

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITI 288
           D+H  G D+++ H         C               +GF+   +G KMSKS GN +  
Sbjct: 525 DVHIIGKDIVWFH----TVIWPCMLMAADLPLPKCVFGHGFVTAADGEKMSKSLGNVVDP 580

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N++L+          A   R  ++  T +   + F    LT 
Sbjct: 581 NDILQAH-------DADSFRFYLVRETKFGSDLRFDEDALTA 615


>gi|237838135|ref|XP_002368365.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
 gi|211966029|gb|EEB01225.1| methionyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
          Length = 976

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 39/102 (38%), Gaps = 15/102 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITI 288
           D+H  G D+++ H         C               +GF+   +G KMSKS GN +  
Sbjct: 525 DVHIIGKDIVWFH----TVIWPCMLMAADLPLPKCVFGHGFVTAADGEKMSKSLGNVVDP 580

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N++L+          A   R  ++  T +   + F    LT 
Sbjct: 581 NDILQAH-------DADSFRFYLVRETKFGSDLRFDEDALTA 615


>gi|91762511|ref|ZP_01264476.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
 gi|91718313|gb|EAS84963.1| Leucyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
          Length = 844

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 40/147 (27%), Gaps = 21/147 (14%)

Query: 12  ERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
            RK   F  ++     M+   P      H+G+ R   + DVL R          V +   
Sbjct: 30  TRKK--FYCLE-----MF---PYPSGKIHMGHVRNYTIGDVLARYKMLQGYN--VLHPMG 77

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRATNH 128
                      ARQ       N      T  N +       +L             + ++
Sbjct: 78  WDSFGMPAENAARQN------NLDPKTWTESNIKTMRSQLKKLGLSIDWDKEISTCSEDY 131

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFD 155
                    ++   G  Y   N + +D
Sbjct: 132 YKHQQEFFLDLYDKGLVYRKENYVNWD 158


>gi|86156442|ref|YP_463227.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85772953|gb|ABC79790.1| Isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 946

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           +  W+S        W    + +    L    D++  G D       + +  S        
Sbjct: 568 DVWWDSGV-----SW---AAVIEREGLELPVDLYLEGSDQHRGWFHSSLLTSMALRGAAP 619

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
              +  H   L+  G+ MSKS GN I  +E++       + + A ++RL +  + YR+ I
Sbjct: 620 YRAVLTHGFILDQHGKAMSKSAGNGIEPSEII-------KKYGADILRLWVSASDYRDDI 672

Query: 321 DFTVQRLTEAEILLSKWPQTST-SKGIID 348
               Q L        K   T   + G +D
Sbjct: 673 GLGDQILAGLAEGYRKIRNTIRYALGALD 701



 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 43/141 (30%), Gaps = 21/141 (14%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID----------DKI 79
           GP  Y     HIG+A   I+ DV+ +                I   D          DK 
Sbjct: 58  GP-PYANGDIHIGHALNKILKDVVVKYRNLNGEVADY-----IPGWDCHGLPIELKVDKE 111

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
           +   ++E     I +A      K  ++  +   RL        P AT    +  +++   
Sbjct: 112 LGPKKRELDRPAIIEACRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRTF 171

Query: 137 QNIILHGHAYEANNEIIFDTS 157
                 G  Y     + +  +
Sbjct: 172 ARAAEKGFLYRGKKPVYWCIT 192


>gi|134297944|ref|YP_001111440.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|134050644|gb|ABO48615.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 518

 Score = 40.6 bits (94), Expect = 0.48,   Method: Composition-based stats.
 Identities = 28/137 (20%), Positives = 43/137 (31%), Gaps = 13/137 (9%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
                Y+  P  Y  D  HIG+A   +  D + R  R    +     V  +T  D+    
Sbjct: 4   KKPNFYITTPIYYPSDNLHIGHAYTTVAADTMARYKRLTGYD-----VWFLTGSDEH--- 55

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNI 139
             + E  +   N             F K   RL         R T+  H   +    Q +
Sbjct: 56  GQKIERAAKNKNQTPKEYVDHIVSGFKKLWERLDVSYNDF-IRTTDERHHKVVQKFFQQL 114

Query: 140 ILHGHAYEANNEIIFDT 156
              G  Y++  E  + T
Sbjct: 115 FDQGDIYKSEYEGWYCT 131



 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 52/153 (33%), Gaps = 56/153 (36%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDF 322
           +G+L L+  KMSKS GN +  + L++        +    +R  +L    R         +
Sbjct: 290 HGWLLLDSGKMSKSKGNVVDPHVLID-------KYGVDAVRYFLL----RELPFGSDGLY 338

Query: 323 TVQRL---------TEAEILLSK-----------WPQTSTSKGIIDPAVLSALYNDLNTV 362
           + + L          +   LLS+             QT  +    D  ++     DL T 
Sbjct: 339 SEEALVKRINTDLANDYGNLLSRSATMMEKYQQGVLQTPGAPEGPDEELI-----DLATA 393

Query: 363 ---------------SAIQALHKLARESTKNHD 380
                          +A+ A+ ++   + K  +
Sbjct: 394 TPKLVEEYMEKSELSNALAAIWQMVGRANKYLE 426


>gi|313141807|ref|ZP_07804000.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313130838|gb|EFR48455.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 813

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 15/93 (16%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E  +++ +  G +  EG KMSKS GN +   E++ T       + A   RL +L      
Sbjct: 563 EPFSHL-LTQGMVTKEGAKMSKSKGNVVDPQEIINT-------YGADTARLFILFA---A 611

Query: 319 P----IDFTVQRLTEAEILLSKWPQTSTSKGII 347
           P    +++    L  +   + +      +   I
Sbjct: 612 PPVRELEWNDSALEGSFRFIKRLCAKIENVDSI 644


>gi|302191489|ref|ZP_07267743.1| isoleucyl-tRNA synthetase [Lactobacillus iners AB-1]
 gi|309806571|ref|ZP_07700571.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
 gi|308167050|gb|EFO69229.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|224418274|ref|ZP_03656280.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827598|ref|ZP_04870483.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511004|gb|EES89663.1| leucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 812

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 15/93 (16%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E  +++ +  G +  EG KMSKS GN +   E++ T       + A   RL +L      
Sbjct: 562 EPFSHL-LTQGMVTKEGAKMSKSKGNVVDPQEIINT-------YGADTARLFILFA---A 610

Query: 319 P----IDFTVQRLTEAEILLSKWPQTSTSKGII 347
           P    +++    L  +   + +      +   I
Sbjct: 611 PPVRELEWNDSALEGSFRFIKRLCAKIENVDSI 643


>gi|238583385|ref|XP_002390224.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
 gi|215453394|gb|EEB91154.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
          Length = 282

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 17/107 (15%)

Query: 7   IYNTLERK--ITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYG 62
           ++N+  R+   TE +         Y   P  Y     HIG+   ++  DV  R  R    
Sbjct: 10  LWNSAGRRCLSTEVKP-------WYTTTPIFYPNAVPHIGHLYSLVTADVFARYQRLKNP 62

Query: 63  EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
              V +V   TD     I++A                  + +++F +
Sbjct: 63  GIPVRFVTG-TDEHGLKIQKAA-----TAKGMQPKEFCDQTSEKFRR 103


>gi|254427066|ref|ZP_05040773.1| isoleucyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196193235|gb|EDX88194.1| isoleucyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 937

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN I   E+            A ++RL +  T YR  +  +   
Sbjct: 592 HGFTVDEHGRKMSKSVGNVIAPQEV-------WNDLGADILRLWVCATDYRGEMSVSKDI 644

Query: 327 LTEAEILLSKWPQTST 342
           L +      +   TS 
Sbjct: 645 LKQMGDSYRRIRNTSR 660


>gi|70699871|gb|AAZ06840.1| valyl-tRNA synthetase [Microbacterium arborescens]
          Length = 859

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 75/197 (38%), Gaps = 18/197 (9%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L   FD+   G D+I     + + +S   D     ++  I    ++ + +KMSKS GN +
Sbjct: 540 LVAPFDLRPQGQDIIRTWLFSTMLRSALEDGRAPWSDAAISGFIVDPDRKKMSKSKGNVV 599

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
           T  ++L              +R     +       F  Q  T+ +I      +   +   
Sbjct: 600 TPADILAQHGT-------DAVRYWAASSRLGSDAAFDPQNPTQVKIGRRLAIKVLNAAKF 652

Query: 347 IDPAVL---SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           +    +   +A+ +DL+  + +  L ++  ++T+       F A  H   +E+ +     
Sbjct: 653 VLSFPVPDGAAVTHDLD-AAMLATLDRVIVDATRA------FEAYDHARALEITEAFFWT 705

Query: 404 NISIAIEKLVQERLILL 420
                +E LV+ER    
Sbjct: 706 FCDDYLE-LVKERAYDR 721


>gi|16080084|ref|NP_390910.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221310971|ref|ZP_03592818.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315298|ref|ZP_03597103.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320215|ref|ZP_03601509.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324497|ref|ZP_03605791.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|3123286|sp|P36430|SYL_BACSU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2293181|gb|AAC00259.1| leucine tRNA synthetase [Bacillus subtilis]
 gi|2635516|emb|CAB15010.1| leucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 804

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ +         A  +RL  M M   
Sbjct: 557 KEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W       G ++  ++ 
Sbjct: 610 DASIAWSESGLDGARRFLDRVWRLFIEDSGELNGKIVE 647


>gi|13357972|ref|NP_078246.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762094|ref|YP_001752494.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171920368|ref|ZP_02931698.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|183508502|ref|ZP_02958030.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186701674|ref|ZP_02971372.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|81549554|sp|Q9PQ79|SYI_UREPA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|11271209|pir||G82894 isoleucyl-tRNA synthetase UU410 [imported] - Ureaplasma urealyticum
 gi|6899398|gb|AAF30821.1|AE002138_8 isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168827671|gb|ACA32933.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|171902796|gb|EDT49085.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|182675931|gb|EDT87836.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|186700922|gb|EDU19204.1| isoleucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 900

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   L+ EG KMSKS GN +   ++        + + A V+RL +  + Y+     + + 
Sbjct: 583 HGMVLDGEGYKMSKSKGNVVDPLDVC-------KIYGADVLRLWIANSDYQNDTRISEEI 635

Query: 327 LTEAEILLSKWPQT 340
           L +   +  +   T
Sbjct: 636 LKQNAEIYRRIRNT 649


>gi|224543023|ref|ZP_03683562.1| hypothetical protein CATMIT_02217 [Catenibacterium mitsuokai DSM
           15897]
 gi|224524048|gb|EEF93153.1| hypothetical protein CATMIT_02217 [Catenibacterium mitsuokai DSM
           15897]
          Length = 821

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 52/146 (35%), Gaps = 36/146 (24%)

Query: 258 IEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTH 315
            E    ++ H G  L   G KMSKS GN I  ++++E       ++ A  +RL  M M  
Sbjct: 579 KEPFKKLY-HQGMILGPNGVKMSKSKGNVINPDDIVE-------AYGADTLRLYEMFMG- 629

Query: 316 YREPID----FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-----------ND-- 358
              P++    ++   +  ++  L +  +       +      +L             D  
Sbjct: 630 ---PLEASKPWSETGVEGSKKWLERVYRLFVESDKLTDTNDGSLDFVYHSTVKKVTEDYE 686

Query: 359 ---LNTVSAIQALHKLARESTKNHDL 381
               NT  AI  +     E+ K   +
Sbjct: 687 NLGFNT--AISQMMIFINEAYKAKAV 710


>gi|223043792|ref|ZP_03613835.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442889|gb|EEE48991.1| isoleucyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 916

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 38/127 (29%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL        P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQVDIQKKDFKRLGVRGDFDNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQT 340
           L +   +  K   T
Sbjct: 638 LKQTSDVYRKIRNT 651


>gi|153852712|ref|ZP_01994149.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
 gi|149754354|gb|EDM64285.1| hypothetical protein DORLON_00131 [Dorea longicatena DSM 13814]
          Length = 886

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 43/211 (20%), Positives = 78/211 (36%), Gaps = 31/211 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              ++IH    + +GRKMSKS GN I   E+
Sbjct: 481 DVLVTGYDIIFFWVIRMVFSGYAHTGKAPFHTVFIHGLVRDSQGRKMSKSLGNGIDPLEI 540

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R+ ++  +   P   + F  +R+  +    +K W  +      +
Sbjct: 541 ID-------QYGADALRMTLMTGN--APGNDMRFYNERVEASRNFANKVWNASRFIMMNL 591

Query: 348 DPAVLSALYNDLNTVSA----IQALHKLARESTKNHDLLPIFNASAHI---LGIEVCKE- 399
           D   L    N      A    +   + L ++ T+N D   +  A + I   +  E C   
Sbjct: 592 DEKELKKPAN-FEKRPADCWIMSKCNSLVKDVTENMDKFELGIALSKIYDFMWDEFCDWY 650

Query: 400 ---------HLNKNISIAIEKLVQERLILLK 421
                    H +++   A   L   R +L K
Sbjct: 651 IEMAKYPIYHADEDQEAANAALWTLREVLKK 681


>gi|145633270|ref|ZP_01789001.1| putative ATPase [Haemophilus influenzae 3655]
 gi|144986116|gb|EDJ92706.1| putative ATPase [Haemophilus influenzae 3655]
          Length = 682

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFTH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLDDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDETLFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|119494198|ref|ZP_01624670.1| leucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
 gi|119452132|gb|EAW33338.1| leucyl-tRNA synthetase [Lyngbya sp. PCC 8106]
          Length = 995

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 54/171 (31%), Gaps = 18/171 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D    + Y      Y     H+G+ R   + DV+ RL R          V N    D   
Sbjct: 29  DAQKPKFYTLAMFPYPSGNLHMGHVRVYTIIDVIARLKRMQGFR-----VLNPMGWDAFG 83

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
           +     E+ +I  N   +  T +N  Q  +   RL       +  AT   P      Q  
Sbjct: 84  LPA---ENAAIERNIHPAKWTYQNIAQMKQQLERLGISFDWEKELATCS-PDYYRWTQWI 139

Query: 138 --NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                  G AY+    + +D          +  ++D +    R   K  +K
Sbjct: 140 FLQFYNAGLAYQKEAAVNWDPIDQT---VLANEQVDSEGRSWRSGAKVERK 187


>gi|114586471|ref|XP_001147597.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial isoform 2 [Pan
           troglodytes]
          Length = 830

 Score = 40.6 bits (94), Expect = 0.49,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ ++  N      T  N +   K   RL  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAVERNLHPQSWTQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|317180163|dbj|BAJ57949.1| methionyl-tRNA synthetase [Helicobacter pylori F32]
          Length = 650

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|309805561|ref|ZP_07699606.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
 gi|308165212|gb|EFO67450.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|309804256|ref|ZP_07698333.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
 gi|308163659|gb|EFO65929.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|295425100|ref|ZP_06817805.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
 gi|295065159|gb|EFG56062.1| valine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
          Length = 890

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          ++ +H    + +GRKMSKS GN +   +++   
Sbjct: 491 TGYDIIFFWVSRMIFQSLHFTHERPFKDVVLHGLMRDPQGRKMSKSLGNGVDPMDVVN-- 548

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 +    +R  +L  
Sbjct: 549 -----KYGCDALRWFLLNG 562


>gi|260654882|ref|ZP_05860370.1| leucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
 gi|260630384|gb|EEX48578.1| leucine--tRNA ligase [Jonquetella anthropi E3_33 E1]
          Length = 836

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 43/149 (28%), Gaps = 19/149 (12%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVYDFA---HIGNARPMIVFDVLYRLLRYYYGEK 64
           +NT  +   +     P   R YV     Y      H+G+       D+  R LR      
Sbjct: 19  HNTF-QVKED--PSVPPEKRRYVLDMFPYPSGAGLHVGHPEGYTATDIYCRYLRMNGYN- 74

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
            V +              A      I       + T  N  +F +    L       +  
Sbjct: 75  -VLHPMGFDSFGLPAENYA------IKTGTHPRVTTEANINRFRQQIKSLGFCYDWSREV 127

Query: 125 ATNHIPQMIYLIQ----NIILHGHAYEAN 149
           AT H P+     Q     +   G AYEA 
Sbjct: 128 AT-HQPEYYRWTQWLFLQMYRKGLAYEAE 155


>gi|228475237|ref|ZP_04059963.1| valine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228270848|gb|EEK12250.1| valine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 876

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I Q           ++ +H      +GRKMSKS GN +   +++
Sbjct: 476 VLVTGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVI 535

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           E        + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 536 E-------KYGADSLRYFLATGS--SPGNDLRYSTEKVESVWNFINKIWNGAR 579


>gi|153835356|ref|ZP_01988023.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
 gi|148868127|gb|EDL67289.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
          Length = 686

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 60/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G F+  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L  +          ++    + +  +L         I  I    + 
Sbjct: 394 SRNAGFISKRFEGKLAENFAEPELY---NEFVAAADRIAELYETREFGRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 451 ANQYVDE 457


>gi|143148|gb|AAA22571.1| transfer RNA-Leu synthetase [Bacillus subtilis]
          Length = 804

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 36/98 (36%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ +         A  +RL  M M   
Sbjct: 557 KEPFQKLYNQGMILGENNEKMSKSKGNVVNPDEIVASHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W       G ++  ++ 
Sbjct: 610 DASIAWSESGLDGARRFLDRVWRLFIEDSGELNGKIVE 647


>gi|315653381|ref|ZP_07906303.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
 gi|315489306|gb|EFU78946.1| isoleucine--tRNA ligase [Lactobacillus iners ATCC 55195]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|312872405|ref|ZP_07732474.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
 gi|311091987|gb|EFQ50362.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|312871879|ref|ZP_07731963.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
 gi|312874401|ref|ZP_07734431.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311090013|gb|EFQ48427.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
 gi|311092601|gb|EFQ50961.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|309809437|ref|ZP_07703295.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
 gi|308170109|gb|EFO72144.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|309808603|ref|ZP_07702495.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325913434|ref|ZP_08175800.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
 gi|308168077|gb|EFO70203.1| isoleucine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
 gi|325477203|gb|EGC80349.1| isoleucine--tRNA ligase [Lactobacillus iners UPII 60-B]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGQAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|308062316|gb|ADO04204.1| methionyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 653

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFKIMFEKGDIYKGVY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|301060390|ref|ZP_07201253.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300445586|gb|EFK09488.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 642

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 36/112 (32%), Gaps = 14/112 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV DVL R   +        ++    +  DKI+  A           
Sbjct: 14  VNAEPHIGHAYTTIVADVLNRF--HKLAGFDTFFLTGTDEHGDKIVAAAEN------AGQ 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-----NHIPQMIYLIQNIIL 141
                T + +  F     RL     +   R T       +  ++ L++    
Sbjct: 66  TPKQYTDRISAMFQGLWPRLNISN-SAFIRTTDAYHQETVRNILSLVKEKDD 116


>gi|259908205|ref|YP_002648561.1| arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|224963827|emb|CAX55329.1| Arginyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
 gi|283478133|emb|CAY74049.1| argS [Erwinia pyrifoliae DSM 12163]
          Length = 576

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            ++P  + +    P V    H+G+ R  I+ D   R L +      V    ++ D   + 
Sbjct: 109 PVEPKTVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLG--HKVIRANHVGDWGTQF 166

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        N+    +   + + F ++  R     P    RA  ++
Sbjct: 167 G--MLIAFLEKQQNEHQETLALADLEAFYREAKRTYDEDPAFAERARGYV 214


>gi|220915135|ref|YP_002490439.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219952989|gb|ACL63373.1| isoleucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 946

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 54/149 (36%), Gaps = 16/149 (10%)

Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
           +  W+S        W    + +    L    D++  G D       + +  S        
Sbjct: 568 DVWWDSGV-----SW---AAVIEREGLELPVDLYLEGSDQHRGWFHSSLLTSMALRGAAP 619

Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
              +  H   L+  G+ MSKS GN I  +E++       + + A ++RL +  + YR+ I
Sbjct: 620 YRAVLTHGFILDQHGKAMSKSAGNGIEPSEII-------KKYGADILRLWVSASDYRDDI 672

Query: 321 DFTVQRLTEAEILLSKWPQTST-SKGIID 348
               Q L        K   T   + G +D
Sbjct: 673 GLGDQILAGLAEGYRKIRNTIRYALGALD 701



 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 18/134 (13%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID----------DKIIERARQE 86
              HIG+A   I+ DV+ +                I   D          DK +   ++E
Sbjct: 64  GDIHIGHALNKILKDVVVKYRNLNGEVADY-----IPGWDCHGLPIELKVDKELGPKKRE 118

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHG 143
                I +A      K  ++  +   RL        P AT    +  +++         G
Sbjct: 119 LDRPAIIEACRKYAQKWIEKQRESFKRLGVFGRWETPYATMSRGYEAEIVRTFARAAEKG 178

Query: 144 HAYEANNEIIFDTS 157
             Y     + +  +
Sbjct: 179 FLYRGKKPVYWCIT 192


>gi|170583259|ref|XP_001896500.1| leucyl-tRNA synthetase [Brugia malayi]
 gi|158596282|gb|EDP34657.1| leucyl-tRNA synthetase, putative [Brugia malayi]
          Length = 1183

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 60/168 (35%), Gaps = 37/168 (22%)

Query: 221 AMSSHYL--GKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLE 274
           A+           D+   G DL+  H      N +A     D+ E        NG L L 
Sbjct: 659 ALCRKEFLYWYPVDMRASGKDLLQNHLTYYLFNHVAIWK--DQPELWPRSIRANGHLLLN 716

Query: 275 GRKMSKSNGNFITIN-------------------ELLETKKFGGRSWPAPVIRLAMLMTH 315
             KMSK  GNF+T++                   + +E   F      A V+RL  L   
Sbjct: 717 NEKMSKQTGNFLTLSETVGLFSADGMRISLADAGDYVEDANFVYDMADAAVLRLYNL--- 773

Query: 316 YREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
               + ++ +   L E + +L    + + +  + D  + SA+    ++
Sbjct: 774 ----LVWSREMVALRE-QNILRSGQKLTFADQVFDNEMNSAIQKTFDS 816


>gi|73748231|ref|YP_307470.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123732537|sp|Q3ZZB2|SYM_DEHSC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|73659947|emb|CAI82554.1| methionyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 553

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 40  HIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           H+G+ A   +  D+  R  R    E  V  V         I  RA QE          + 
Sbjct: 19  HLGHVAGAYLPADIFARYHRTRGDE--VLMVSGSDMHGTPITIRAEQE------GITAAE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
           +  +  Q+F+    +L      +   AT NH      +  ++   G+ Y
Sbjct: 71  VAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIY 119


>gi|147669013|ref|YP_001213831.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|187647716|sp|A5FS74|SYM_DEHSB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|146269961|gb|ABQ16953.1| methionyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 553

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 40  HIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           H+G+ A   +  D+  R  R    E  V  V         I  RA QE          + 
Sbjct: 19  HLGHVAGAYLPADIFARYHRTRGDE--VLMVSGSDMHGTPITIRAEQE------GITAAE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
           +  +  Q+F+    +L      +   AT NH      +  ++   G+ Y
Sbjct: 71  VAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIY 119


>gi|34580499|ref|ZP_00141979.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28261884|gb|EAA25388.1| leucyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 835

 Score = 40.6 bits (94), Expect = 0.50,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 28/170 (16%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  +  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNEFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             IRL +L  +   + ++++   +      ++K      +        + +L +D+N   
Sbjct: 623 DAIRLFVLSDSPPEKDLEWSASGIEGCSRFINKLEYMFKA--------IDSLKDDVN-SE 673

Query: 364 AIQALHKLARESTK--NHDLL--PIFNASAHILGIEVCKEHLNKNISIAI 409
             + L++L   + K    D+    +  A A I         L+  IS  I
Sbjct: 674 VNKELNRLVHFTIKHVAEDIKHFALNRAIARI-------RELSNAISAEI 716


>gi|320581330|gb|EFW95551.1| Mitochondrial isoleucyl-tRNA synthetase [Pichia angusta DL-1]
          Length = 990

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 11/145 (7%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA-PVIRLAMLMTHYREPIDFTVQ 325
           H   L+ +G KMSKS GN I   +++E  K           +RL +    Y   +     
Sbjct: 649 HGFTLDEKGDKMSKSLGNTIVPVDIVEGNKAKKVPGLGIDGLRLWVAQADYTSDMAVGPV 708

Query: 326 RLTEAEILLSKWP--------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
            L     ++ K               +  +D A L A+      +S + +  K AR+  +
Sbjct: 709 ILNRVADVVKKLRFTFRFLLGNIGDMEQTVDYAQLDAMDRY--ILSRLASFEKKARQCYE 766

Query: 378 NHDLLPIFNASAHILGIEVCKEHLN 402
            H+   I      ++ +++   + +
Sbjct: 767 AHNYSKIIKDMNQLVNVDLSSLYFD 791


>gi|310767881|gb|ADP12831.1| arginyl-tRNA synthetase [Erwinia sp. Ejp617]
          Length = 576

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 37/110 (33%), Gaps = 4/110 (3%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            ++P  + +    P V    H+G+ R  I+ D   R L +      V    ++ D   + 
Sbjct: 109 PVEPKTVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLAFLG--HKVIRANHVGDWGTQF 166

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
                        N+    +   + + F ++  R     P    RA  ++
Sbjct: 167 G--MLIAFLEKQQNEHQETLALADLEAFYREAKRTYDEDPAFAERARGYV 214


>gi|289432281|ref|YP_003462154.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288946001|gb|ADC73698.1| methionyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 553

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 38/109 (34%), Gaps = 10/109 (9%)

Query: 40  HIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           H+G+ A   +  D+  R  R    E  V  V         I  RA QE          + 
Sbjct: 19  HLGHVAGAYLPADIFARYHRTRGDE--VLMVSGSDMHGTPITIRAEQE------GITAAE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
           +  +  Q+F+    +L      +   AT NH      +  ++   G+ Y
Sbjct: 71  VAERYHQRFMASWPKLGISWDFYTSTATANHARTAQEMFLSLYEKGYIY 119


>gi|260584693|ref|ZP_05852439.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
 gi|260157716|gb|EEW92786.1| valine--tRNA ligase [Granulicatella elegans ATCC 700633]
          Length = 881

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q           N+ IH    + +GRKMSKS GN +   E++E        + A  +R  
Sbjct: 498 QGLEFTGKRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMEVIE-------QYGADALRWF 550

Query: 311 MLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
           +       + + ++  ++  A   ++K    S 
Sbjct: 551 LANGSAPGQDVRYSTDKMDAAWNFINKIWNASR 583


>gi|256384218|gb|ACU78788.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|256385050|gb|ACU79619.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
 gi|296455934|gb|ADH22169.1| arginine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
          Length = 554

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 6/83 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT   + H+G+AR  ++  VL  L +         Y  N  D  ++I   A         
Sbjct: 125 PT--GYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVN--DAGNQINVLAVTVFVHYLQ 180

Query: 91  PINDAISIITSKNTQQFVKDTTR 113
            +N       +       +D  +
Sbjct: 181 ALNIDAKKPENCYAGDMYEDLAK 203


>gi|116075644|ref|ZP_01472903.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
 gi|116066959|gb|EAU72714.1| isoleucyl-tRNA synthetase [Synechococcus sp. RS9916]
          Length = 978

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 7/113 (6%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 610 SVAVNGHAPYRTVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPPYGADVLRL 669

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLS-ALYN 357
            +    Y   +      L++   +  K   T+     +    DPA  + A+ +
Sbjct: 670 WVSSVDYSADVPIGAGILSQLADVYRKVRNTARYLLGNLHDFDPARDAVAIED 722


>gi|13541592|ref|NP_111280.1| leucyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|48428561|sp|Q97AN8|SYL_THEVO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|14324988|dbj|BAB59914.1| tRNA synthetase Leu [Thermoplasma volcanium GSS1]
          Length = 910

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             DI    +  I  H    +         EK  +  I +G +   G K+SKS GN +++ 
Sbjct: 564 PVDIRLTAVPHISNHLSFYVMNHAAIFPPEKWPSGLIISGLVVSNGAKISKSKGNVVSLL 623

Query: 290 ELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
           E+        + + A + RL + +       +D+    L+      +++     S
Sbjct: 624 EI-------TKKYSADIYRLYVAVQADVSSTMDWNENDLSNIVRRFNEFKTIMDS 671


>gi|327193417|gb|EGE60316.1| methionyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
          Length = 519

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     + V ++    +   K+ + AR E            
Sbjct: 23  PHIGHAYELIATDAMARYQRLDG--RDVFFLTGTDEHGQKMQQTARAE------GITAQA 74

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +N+ +F +   +L   +     R T 
Sbjct: 75  LADRNSGEF-EAMAKLLNASNDDFIRTTQ 102


>gi|242043012|ref|XP_002459377.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
 gi|241922754|gb|EER95898.1| hypothetical protein SORBIDRAFT_02g003650 [Sorghum bicolor]
          Length = 977

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 68/174 (39%), Gaps = 29/174 (16%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  + +++H    + EGRKMSK+ GN I   + +       + +    +R  + + 
Sbjct: 582 FTGSVPFSYVYLHGLIRDAEGRKMSKTLGNVIDPLDTI-------KDYGTDALRFTLSLG 634

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSA----LYNDLNTVSAIQA- 367
              + ++ +++RLT  +   +K         + + D + +SA    L N  ++ +++Q  
Sbjct: 635 TAGQDLNLSIERLTSNKAFTNKLWNAGKFLLQNLPDKSDVSAWDVLLANKFDSEASLQKL 694

Query: 368 ----------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
                     LH+L  + ++++D     +A+  I                 IE 
Sbjct: 695 PLPECWVVTGLHELIDKVSRSYDKFFFGDAAREI-----YDFFWGDFADWYIEA 743


>gi|300769703|ref|ZP_07079586.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308181105|ref|YP_003925233.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300492746|gb|EFK27931.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308046596|gb|ADN99139.1| valine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 889

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 10/113 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      + QS          ++ +H    + +GRKMSKS GN I   ++
Sbjct: 487 DTLVTGYDIIFFWVSRMMFQSLEFTGKRPFKHVLLHGLIRDEQGRKMSKSLGNGIDPMDV 546

Query: 292 LETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +E        + A  +R  +    T   + + F+  ++  A   ++K    S 
Sbjct: 547 IE-------KYGADALRWFLSNGSTA-GQDVRFSYTKMDAAWNFINKIWNASR 591


>gi|225019235|ref|ZP_03708427.1| hypothetical protein CLOSTMETH_03188 [Clostridium methylpentosum
           DSM 5476]
 gi|224947866|gb|EEG29075.1| hypothetical protein CLOSTMETH_03188 [Clostridium methylpentosum
           DSM 5476]
          Length = 801

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 51/145 (35%), Gaps = 24/145 (16%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E  A    H   L   G KMSKS GN +  ++++       + + A  +RL  M 
Sbjct: 556 VVSCPEPYAKRTSHGMILGENGEKMSKSRGNVVNPDDII-------KEYGADTMRLYEMF 608

Query: 313 MTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
           +  + +   ++   +   +  L +        T      P +   +             H
Sbjct: 609 IGDFEKAAPWSSASIRGCKRFLDRVWNLQTCVTDGAGYRPEIEGEM-------------H 655

Query: 370 KLARESTKNHDLLPIFNASAHILGI 394
           K  ++ T++ + L    A A ++ +
Sbjct: 656 KTIKKVTEDIEALKFNTALAAMMAL 680


>gi|332529578|ref|ZP_08405534.1| leucyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332040928|gb|EGI77298.1| leucyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 903

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 40/137 (29%), Gaps = 15/137 (10%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y C    Y     H+G+ R   + D+L R LR       +          D     
Sbjct: 38  KPKFYACSMLPYPSGKLHMGHVRNYTINDMLARSLRMKGHNVLMPMGW------DAFGLP 91

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----N 138
           A  E+ ++      +  T +N          +  LA           P      Q     
Sbjct: 92  A--ENAALKNGVPPAKWTYENIAYMKGQMQAMG-LAIDWSREVATCDPTYYKWNQWLFLK 148

Query: 139 IILHGHAYEANNEIIFD 155
           ++  G AY     + +D
Sbjct: 149 MLEKGIAYRKTQVVNWD 165


>gi|330507272|ref|YP_004383700.1| valyl-tRNA synthetase [Methanosaeta concilii GP-6]
 gi|328928080|gb|AEB67882.1| valyl-tRNA synthetase [Methanosaeta concilii GP-6]
          Length = 858

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 39/131 (29%), Gaps = 12/131 (9%)

Query: 33  PTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI----TDID-DKIIERARQ 85
           P  Y     HIGNA      D   R  R            +     T++  +++    + 
Sbjct: 42  PPPYPTGNFHIGNALNWCYIDFAARYKRMRGYNVMFPQGWDCHGLPTEVKVEQLNHITKN 101

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIIL 141
           + P          +T +   +F K   RL          AT     ++      +  +  
Sbjct: 102 QVPREEFRRLCEKLTEEAIDRFHKSMGRLGLSIDWSNEYATMKPEYYVKTQTSFV-RMYQ 160

Query: 142 HGHAYEANNEI 152
            G  Y  ++ +
Sbjct: 161 KGQIYREDHPV 171


>gi|258544244|ref|ZP_05704478.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520482|gb|EEV89341.1| isoleucine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 923

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 32/88 (36%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN +   +++           A ++RL + 
Sbjct: 578 CAIDGHPPYKGLLTHGFTVDESGRKMSKSLGNVVEPQKVINNLG-------ADILRLWVS 630

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
              Y   +  +   L +      +   T
Sbjct: 631 SADYSAEVSLSDNILKQRADAYRRIRNT 658


>gi|240047649|ref|YP_002961037.1| isoleucyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239985221|emb|CAT05234.1| Isoleucyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 885

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 9/123 (7%)

Query: 220 SAMSSHYLGK--VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           S +++   G+   FD++  G D       + +  S    +      +  H   ++ +G K
Sbjct: 528 SFLAADIDGEKSPFDLYLEGSDQYRGWFNSSLINSYIYQQKSPYKKLLSHGFVVDAKGNK 587

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           MSKS GN I+  EL++        +   V+RL +  + Y   + ++ +   +   +  K 
Sbjct: 588 MSKSKGNGISPLELID-------KYGTDVLRLWVANSEYFNDVVYSKEIFEQNVEIYRKI 640

Query: 338 PQT 340
             T
Sbjct: 641 RNT 643


>gi|167766367|ref|ZP_02438420.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|317496795|ref|ZP_07955125.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711958|gb|EDS22537.1| hypothetical protein CLOSS21_00871 [Clostridium sp. SS2/1]
 gi|291559231|emb|CBL38031.1| valyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316895807|gb|EFV17959.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 879

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 19/157 (12%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                   + IH    + +GRKMSKS GN I   +++         + A  +R  ++  +
Sbjct: 505 TGKSPFDTVLIHGLVRDEQGRKMSKSLGNGINPLDVIA-------QYGADALRFTLITGN 557

Query: 316 YREP---IDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALYNDLNTVSA--IQAL 368
              P   + +T +R+  +    +K    S      +           DL +     +  L
Sbjct: 558 --APGNDMRYTEKRVIASRNFANKIWNASRFIMMNLEQADFSDVTLEDLTSADKWILSKL 615

Query: 369 HKLARESTKNHDLLPI---FNASAHILGIEVCKEHLN 402
           + LA++ T N +   +          L  E C  ++ 
Sbjct: 616 NTLAKDVTDNMEKYELGIAVQKLNDFLWEEFCDWYIE 652


>gi|86157949|ref|YP_464734.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|109894970|sp|Q2II14|SYR_ANADE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85774460|gb|ABC81297.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 598

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 55/334 (16%), Positives = 102/334 (30%), Gaps = 58/334 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D +  LLR+   +    Y  N  D   ++   AR  H     
Sbjct: 133 PT--GPMHVGHGRNAVVGDGVQGLLRWAGFDVSREYYVN--DYGAQVQTLARSVHLRYQE 188

Query: 93  --NDAISIITSKNTQQFVKDTTRLACLAPTHQPR----------------ATNHIPQMI- 133
               A+++       ++VKD      L   +  R                A  H+  MI 
Sbjct: 189 LHGRAVTMPPKSYPGEYVKDIAA--GLKAEYGARFLDAPEAEWLTLFRDHAVQHVLGMIR 246

Query: 134 ---YLIQNIILHGHAYEANNEIIFD--TSSIPNY---------GSFSRRKIDEQKMGTRV 179
                +         + +   +           +         G     K  + +   + 
Sbjct: 247 EDLAAVNISFDR---WSSEKALYESGTVDRFLRFLEEKDLVYVGKLPPPKSKKGQPPPQA 303

Query: 180 -PEKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FD 232
            P++       D  L++ S    E         G P +   C+ ++ H+  +       D
Sbjct: 304 QPDEEGVTAAEDLTLFRSSAYGDEVDRPVKKADGTPTYF--CADIAYHWDKRQRADALVD 361

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           + G       P  E  +     + +      I + +     E  KMSK  G  +++ E++
Sbjct: 362 VLGADHGGYVPRLEAAMEALGASRKDLHVVLIQMVSLMRGGESVKMSKRAGTLVSLREVV 421

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +              R   L      P+DF V+ 
Sbjct: 422 DEVGR-------DATRFIFLTRRSDAPLDFDVEL 448


>gi|46579659|ref|YP_010467.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|81566897|sp|Q72CN5|SYR_DESVH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|46449074|gb|AAS95726.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
 gi|311233457|gb|ADP86311.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
          Length = 551

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 53/322 (16%), Positives = 101/322 (31%), Gaps = 54/322 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   V D L R++R+   +    Y  N      +++  +         
Sbjct: 127 PT--GPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYINDAGRQMRLLGLSVWVRAKELA 184

Query: 93  NDAISIITSKNTQQFVKDTTR---------LACLAPTHQPRATNH-IPQMIYLIQNIILH 142
              +++        ++KD  R         L       + R   + +  ++  I+  +  
Sbjct: 185 GRPVTLPEDFYRGDYIKDIARELMEKEPGLLDLDDAAGEDRCFAYAMSSILDGIKQDLAD 244

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
              +   +++ F   S+   G+        +K   R+ E        D  LW R+T    
Sbjct: 245 ---FRVEHQVWFSERSLVEGGAV-------EKTFNRLKE-AGLAFEQDGALWFRTTDFGD 293

Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF---------PHHEN--EIAQ 251
             +    +         S  +  Y       H    D  F          HH     +  
Sbjct: 294 DKDRVLRK---------SDGTLTYFSSDIAYHDNKYDRGFDLVVDIWGADHHGYIPRMRA 344

Query: 252 SCCADRIEKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           +  A   +  A   +    +NL   G    MS   G F T+ +++       +   A   
Sbjct: 345 AVAALGRKPEAFDVVLIQLVNLLRGGELVAMSTRAGQFETLADVV-------KETGADAA 397

Query: 308 RLAMLMTHYREPIDFTVQRLTE 329
           R   L      P+DF ++ + +
Sbjct: 398 RFMFLSRKSDSPLDFDLELVKQ 419


>gi|116511631|ref|YP_808847.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|123025501|sp|Q030E7|SYL_LACLS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116107285|gb|ABJ72425.1| leucyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 829

 Score = 40.6 bits (94), Expect = 0.51,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 52/148 (35%), Gaps = 30/148 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +  ++++E        + A  +R   M M      I ++ + L  A   L
Sbjct: 608 AKMSKSLKNVVNPDDVVE-------HYGADTLRVYEMFMGPLDASIPWSEEGLEGARKFL 660

Query: 335 SKWPQTSTSKGIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTK 377
            +  +   +  I D                    L  +Y   NT  AI  L      + K
Sbjct: 661 DRVVRMIDNSEISDKNNGELDKVYNETVKNVSERLDLMY--FNT--AISQLMIFVNATNK 716

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNI 405
              +LP+  A+  +  +     H+ + +
Sbjct: 717 AK-ILPLEYANGFVQLLAPFAPHIAEEL 743


>gi|322514586|ref|ZP_08067619.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
 gi|322119525|gb|EFX91612.1| leucine--tRNA ligase [Actinobacillus ureae ATCC 25976]
          Length = 861

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 48/159 (30%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND----- 358
             +  A+  L +          +++   +D                  ++ + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYSQNSATAALDVTALNKAQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKN-----HDLLPIFNASAHI 391
             NT  AI A+ +L  + TK       D   +  A + +
Sbjct: 721 TFNT--AIAAIMELMNKLTKAPLENEQDKAVMAEALSAV 757


>gi|312874547|ref|ZP_07734572.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|329921150|ref|ZP_08277672.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
 gi|311089938|gb|EFQ48357.1| isoleucine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
 gi|328934788|gb|EGG31279.1| isoleucine--tRNA ligase [Lactobacillus iners SPIN 1401G]
          Length = 928

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 21/131 (16%), Positives = 43/131 (32%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--RQ 85
           GP   +   H+G+A   I  D++ R                   +  I+ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMRGFYAPFVPGWDTHGLP-IEQQLAKKGVKRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
           E                  ++  +D  RL  +A  + P  T       Q I +   +   
Sbjct: 114 ELNMAEYRQMCHDYALSQIEKQRQDFKRLGVMADWNHPYITFQPQFEAQEIRVFGEMYNK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGKKPVY 184



 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I      L+ +G KMSKS GN I  N+++       +   A +IRL +
Sbjct: 569 SVAISGKAPYRQILSQGFVLDDKGHKMSKSLGNVIAPNDVI-------KQMGAEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L +A     K   T
Sbjct: 622 AGADTTSDVAVSQDILKQAAESYRKVRNT 650


>gi|312883697|ref|ZP_07743421.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309368670|gb|EFP96198.1| methionyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 686

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  LE
Sbjct: 296 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKASTYLE 353

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 354 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 398

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L    N     +     A    + ++      A   I  + +   +
Sbjct: 399 SRNAGFITKRFDGQLSATCNEPELYREFASAADNIAELYETREFSRAIREITALADKANQ 458

Query: 400 HLNKNISIAIEK 411
           ++++     + K
Sbjct: 459 YVDEKAPWVVAK 470


>gi|192359451|ref|YP_001980977.1| leucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|238692445|sp|B3PIB4|SYL_CELJU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190685616|gb|ACE83294.1| leucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 864

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 37/132 (28%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N +    ++         + A  +RL  M      + ++++   +  A   L 
Sbjct: 622 KMSKSKANGVDPESVIN-------QYGADTVRLFTMFAAPPEQSLEWSDSGVEGASRFLR 674

Query: 336 KWPQT------STSKGIIDPA---------------VLSALYND------LNTVSAIQAL 368
           +  +       + + G +D A                +  + +D       NT  AI A+
Sbjct: 675 RLWKAVEGHINAGTPGKLDAASLPQQQKDLRRKTHETIQKVSDDYGRRQTFNT--AIAAV 732

Query: 369 HKLARESTKNHD 380
            +L  E++K  D
Sbjct: 733 MELLNETSKLSD 744



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 29/96 (30%), Gaps = 10/96 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP   + Y      Y     H+G+ R   + DV+ R  R     K V +           
Sbjct: 29  DPGKEKFYCLAMFPYPSGKLHMGHVRNYTITDVIARYQRMQG--KNVLHPMGWDAFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              A +       N A +  T  NT        +L 
Sbjct: 87  ENAALKH------NTAPAKWTYSNTDHMRNQLKQLG 116


>gi|167737601|ref|ZP_02410375.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|110004402|emb|CAK98740.1| probable valyl-trna synthetase protein [Spiroplasma citri]
          Length = 888

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      + +S    + +   ++ IH    + EGRKMSKS GN +   +++
Sbjct: 480 VLVTGYDIIFFWVSRMMFESLEFTKEKPFNDVLIHGLIRDEEGRKMSKSLGNGVDPMDVI 539

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
                  + + A  +R  ++  +   + + F+++++  A   ++K    + 
Sbjct: 540 -------KEYGADTLRYFLVTNSAPGQDLRFSLEKVNSAWNFINKLWNAAR 583


>gi|301598374|pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598375|pdb|2X1L|B Chain B, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598376|pdb|2X1L|C Chain C, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine And
           Adenosine
 gi|301598377|pdb|2X1M|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
           Methionyl-Trna Synthetase In Complex With Methionine
          Length = 524

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 8/78 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     VR +T  D   +   +    +       + 
Sbjct: 27  PHIGHAYEYIATDAIARFKRLDGYD-----VRYLTGTD---VHGQKMAETAAKEGIPAAE 78

Query: 99  ITSKNTQQFVKDTTRLAC 116
           +  +N+  F +   +L  
Sbjct: 79  LARRNSDVFQRLQEKLNI 96


>gi|261855653|ref|YP_003262936.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
 gi|261836122|gb|ACX95889.1| methionyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
          Length = 685

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 49/190 (25%), Positives = 73/190 (38%), Gaps = 25/190 (13%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+ + H     A    A     TA ++ H GFL L G KMSKS G FI     L
Sbjct: 290 IHFIGKDIAYFHTLFWPATLMGAGLRTPTA-VYAH-GFLTLNGEKMSKSRGTFIQARTYL 347

Query: 293 ETKKFGGRSWPAPVIRLAM---LMTHYREPIDFTVQ--RLTEAEILLSKWPQ-TSTSKGI 346
                         +R      L +   + ID +++  RL     L+ K     S   G 
Sbjct: 348 N-------HLDPQALRYYFAAKLSSGI-DDIDLSLEDFRLRVNSDLVGKVVNIASRCAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHK---LARESTKNH-DLLPIFNASAHILGI-EVCKEHL 401
           I     S L  +L    A   LH+    A ES K   +      A   I+ + ++  +++
Sbjct: 400 IHKQFNSELSAEL----AHSELHEQLVAAAESIKTRYERRETGQAMREIMALADLVNQYI 455

Query: 402 NKNISIAIEK 411
           ++    A+ K
Sbjct: 456 DEKKPWAMAK 465


>gi|225075658|ref|ZP_03718857.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
 gi|224953080|gb|EEG34289.1| hypothetical protein NEIFLAOT_00674 [Neisseria flavescens
           NRL30031/H210]
          Length = 929

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISREI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|90419972|ref|ZP_01227881.1| isoleucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
 gi|90336013|gb|EAS49761.1| isoleucyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
          Length = 1008

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 60/164 (36%), Gaps = 26/164 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   ++ EGRKMSKS GN +T  E++       +   A ++RL +
Sbjct: 652 SCGTRGRAPYDAVLTHGFVMDEEGRKMSKSLGNVVTPQEVI-------KQSGADILRLWV 704

Query: 312 LMTHYREPIDFTVQRLT---EAEILLS---KWPQTSTSKGIIDPAVLSALYNDLNTVSA- 364
           + + Y E +      L    ++   L    +W   + S    +   L+ +          
Sbjct: 705 VSSDYSEDLRLGKTILQTNIDSYRKLRNTLRWMLGTLSHDEGETVPLAEM------PELE 758

Query: 365 ------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                 +  + ++ R+   + D   I       + +E+   + +
Sbjct: 759 RLMLNRLAEIDEIVRKGYDSFDFKRISRTLLDFVVVELSAFYFD 802


>gi|26335385|dbj|BAC31393.1| unnamed protein product [Mus musculus]
          Length = 587

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 320 GAGLRPPHRIYVHSHW-TVSGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 369


>gi|74186218|dbj|BAE42903.1| unnamed protein product [Mus musculus]
          Length = 394

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 127 GAGLRPPHRIYVHSHW-TVSGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 176


>gi|34495960|ref|NP_900175.1| leucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
 gi|48428526|sp|Q7P0R1|SYL_CHRVO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|34101814|gb|AAQ58182.1| leucyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
          Length = 872

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 55/168 (32%), Gaps = 39/168 (23%)

Query: 255 ADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML- 312
           A      A   +    + + G  KMSKS  N +   E +E        + A   RL M+ 
Sbjct: 609 AKGKIVAAKHRVDGQPVVVGGIEKMSKSKNNGVDPQEFIE-------KYGADTARLFMMF 661

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALY------------- 356
                + ++++   +  A   L +  +T+      G++ P     L              
Sbjct: 662 AAPPEQSLEWSDAGVEGAFRFLKRLWKTAREHVEAGVVAPYASGELNASQKELRFKLHGT 721

Query: 357 -----ND------LNTVSAIQALHKLARESTKNHDLLPIFNASA-HIL 392
                +D       NT  AI A+ +L     K      I  A A  +L
Sbjct: 722 IQKVADDYGRRQQFNT--AIAAVMELLNAYDKADTSGDIGRAVAQEVL 767


>gi|254181405|ref|ZP_04888002.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
 gi|184211943|gb|EDU08986.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.52,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|118594693|ref|ZP_01552040.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440471|gb|EAV47098.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 553

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 8/81 (9%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+++ H     A +         + I+ H GFL + G KMSKS G FIT    +
Sbjct: 285 VHFIGKDILYFHALFWPA-TLKYSGHRTPSKIYAH-GFLTVNGEKMSKSRGTFITARSYI 342

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
           +  K          +R     
Sbjct: 343 DAFK------TPDYLRYYYFS 357


>gi|74006189|ref|XP_536121.2| PREDICTED: similar to mitochondrial isoleucine tRNA synthetase
           [Canis familiaris]
          Length = 964

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL--ETKKFGGRSWPAPVIRL 309
           S    +      + +H   L  +G KMSKS GN I  + ++     +     + A V+R 
Sbjct: 591 SVATRKKAPFKTVVVHGFTLGEKGEKMSKSLGNVIDPDVVINGGQDQSAEPPYGADVLRW 650

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +  +   L  A   +SK   T
Sbjct: 651 WVAESNVFTEVTISPSVLNAARDDISKLRNT 681


>gi|71119330|gb|AAH99669.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 586

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 319 GAGLRPPHRIYVHSHW-TVSGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 368


>gi|30425166|ref|NP_780648.1| methionyl-tRNA synthetase, mitochondrial precursor [Mus musculus]
 gi|85681906|sp|Q499X9|SYMM_MOUSE RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|26340914|dbj|BAC34119.1| unnamed protein product [Mus musculus]
 gi|124376036|gb|AAI32344.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|148667613|gb|EDL00030.1| methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
 gi|187953681|gb|AAI37740.1| Methionine-tRNA synthetase 2 (mitochondrial) [Mus musculus]
          Length = 586

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 319 GAGLRPPHRIYVHSHW-TVSGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 368


>gi|15896243|ref|NP_349592.1| methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|25009386|sp|Q97EW5|SYM_CLOAB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|15026047|gb|AAK80932.1|AE007796_2 Methionyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325510398|gb|ADZ22034.1| methionyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 644

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 55/185 (29%), Gaps = 50/185 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H           D           +G+L ++G KMSKS GN +    L
Sbjct: 256 DLHLVGKDIIRFHTIYWPIMLMALDL--PLPKQVFGHGWLLVDGGKMSKSKGNVVDPVVL 313

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------- 338
           +         +    +R  +L       I F    L   EI + K               
Sbjct: 314 IN-------EFGTDPVRYYLL-----HEIPFGSDGLFNNEIFIKKINSDLANDLGNLVSR 361

Query: 339 -------------QTSTSKGIIDPAVL-------SALYND---LNTVSAIQALHKLARES 375
                        Q    K  ID  ++         L  D   L    A+  +  L + +
Sbjct: 362 TAAMIEKYFDGSIQPPVDKEEIDNELIDMAISLPEKLDEDIKKLKIPEALDHIWDLIKRA 421

Query: 376 TKNHD 380
            K  D
Sbjct: 422 NKYID 426



 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIGN    +  D L R  R    +    ++   TD   + I+R  ++    P      I+
Sbjct: 21  HIGNTYTTVASDALVRFKRLQGYD---AFMLTGTDEHGQKIQRIAEDKGITPKAYVDEIV 77

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEA--NNEIIFD 155
                   +KD  ++  ++     R T   H+  +  +++    +G  Y++         
Sbjct: 78  AG------IKDLWKMMNISYDKFIRTTDEEHVKAVQKIVKKFYDNGDIYKSAYEGWYCTP 131

Query: 156 TSSI 159
             S 
Sbjct: 132 CESF 135


>gi|152976875|ref|YP_001376392.1| valyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH 391-98]
 gi|152025627|gb|ABS23397.1| valyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
          Length = 881

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W++   +   W S   W     GW  E +     Y     D    G D+I
Sbjct: 433 GTEAPADIENWEQDNDVLDTWFSSALWPFSTLGWPNEDAKDFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   ++++        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVID-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|332798090|ref|YP_004459589.1| methionyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
 gi|332695825|gb|AEE90282.1| Methionyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
          Length = 650

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 42/124 (33%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   ++ D L R  R    +   +Y    TD         +    +    +
Sbjct: 15  VNAEPHIGHAYTTVIADFLNRWHRLAGYD---SYFLTGTD-----EHGEKIAQAAKKAKE 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                  + + +F +   +L C+      R T   H   + Y++Q +   G  Y    E 
Sbjct: 67  EPQAFVDRVSTRFKEAWEKL-CIEYDDFIRTTEPRHKKVVQYILQKVYDAGDIYYGEYEG 125

Query: 153 IFDT 156
            +  
Sbjct: 126 FYCV 129



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 8/80 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I PH          A  I    N+ +    +  +GRKMSK+ GN +       
Sbjct: 256 HLVGKDIIKPHAIFWPTMLKAA-GIPIYKNLNVGGFLMGPDGRKMSKTLGNVV------- 307

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                   +   V+R  +L 
Sbjct: 308 DPFALAEKYGPDVVRYYLLS 327


>gi|325267260|ref|ZP_08133922.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981197|gb|EGC16847.1| isoleucine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 941

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 31/88 (35%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++  GRKMSKS GN I    +          + A ++RL   
Sbjct: 593 CATLGRAPYKQLLTHGFVVDGNGRKMSKSLGNVIAPQAV-------YNEFGADILRLWTA 645

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   +  + + L     +  +   T
Sbjct: 646 NTDYSGELSISNEILKRVTEMYRRIRNT 673


>gi|312795138|ref|YP_004028060.1| Leucyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312166913|emb|CBW73916.1| Leucyl-tRNA synthetase (EC 6.1.1.4) [Burkholderia rhizoxinica HKI
           454]
          Length = 864

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 37/120 (30%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+YR  R       +          D     A  E+ +I      +  
Sbjct: 49  HMGHVRNYTINDVMYRHRRMNGYNVLMPMGW------DAFGMPA--ENAAIANGVPPAKW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     K    +  LA           P      Q     ++  G AY+    + +D
Sbjct: 101 TYDNIAYMKKQMQAMG-LAIDWSREIATCKPDYYKWNQWLFLKMLEKGIAYKKTGTVNWD 159


>gi|229098932|ref|ZP_04229867.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
 gi|229117961|ref|ZP_04247321.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228665410|gb|EEL20892.1| Valyl-tRNA synthetase [Bacillus cereus Rock1-3]
 gi|228684430|gb|EEL38373.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-29]
          Length = 867

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +     +     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEEAVDFKKF--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVIE-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|223039908|ref|ZP_03610191.1| valyl-tRNA synthetase [Campylobacter rectus RM3267]
 gi|222878776|gb|EEF13874.1| valyl-tRNA synthetase [Campylobacter rectus RM3267]
          Length = 982

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 53/153 (34%), Gaps = 27/153 (17%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           Q   A       +I++H    + +GRKMSKS GN I               + A ++R  
Sbjct: 614 QGENALGKLPFDDIYLHALVKDEQGRKMSKSLGNVI-------DPLVSIDEYSADILRFT 666

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA---- 364
            A+L    R  I  + +++       +K    S    + +           N   A    
Sbjct: 667 LALLAVQGR-DIKLSDEKMKLVRNFTNKLYNASKYLLLNESKFA-------NLSDAKIET 718

Query: 365 ------IQALHKLARESTKNHDLLPIFNASAHI 391
                 +   ++  RE+ +N D     +A+  I
Sbjct: 719 KLGKYILSRFNECVREARENIDAYRFNDAANAI 751


>gi|167823191|ref|ZP_02454662.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|118469128|ref|YP_889680.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
 gi|118170415|gb|ABK71311.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
          Length = 515

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 28/78 (35%), Gaps = 8/78 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     VR +T  D   +   +    +       + 
Sbjct: 18  PHIGHAYEYIATDAIARFKRLDGYD-----VRYLTGTD---VHGQKMAETAAKEGIPAAE 69

Query: 99  ITSKNTQQFVKDTTRLAC 116
           +  +N+  F +   +L  
Sbjct: 70  LARRNSDVFQRLQEKLNI 87


>gi|53802679|ref|YP_112557.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
 gi|68565970|sp|Q60CR0|SYM_METCA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53756440|gb|AAU90731.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
          Length = 694

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 8/77 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             I+ H GFL + G KMSKS G FIT    LE
Sbjct: 289 HFIGKDILYFHALFWPAMLE-HSGFRTPTRIFAH-GFLTVNGEKMSKSRGTFITAQSYLE 346

Query: 294 TKKFGGRSWPAPVIRLA 310
                 +      +R  
Sbjct: 347 ------QGLNPEWLRYY 357


>gi|16273191|ref|NP_439429.1| methionyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
 gi|260581399|ref|ZP_05849213.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
 gi|1174532|sp|P43828|SYM_HAEIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|1574731|gb|AAC22924.1| methionyl-tRNA synthetase (metG) [Haemophilus influenzae Rd KW20]
 gi|260091941|gb|EEW75890.1| methionyl-tRNA synthetase [Haemophilus influenzae RdAW]
          Length = 682

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 64/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   S        A +    ++          I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDKSLFAEFTAQAEQIAAYYESREYNKTIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|53725214|ref|YP_102479.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
 gi|68565971|sp|Q62LE0|SYM_BURMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649794|sp|A3MLM5|SYM_BURM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649795|sp|A2SAF7|SYM_BURM9 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649796|sp|A1V5W0|SYM_BURMS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52428637|gb|AAU49230.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|53718640|ref|YP_107626.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126454059|ref|YP_001065337.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|167844753|ref|ZP_02470261.1| methionyl-tRNA synthetase [Burkholderia pseudomallei B7210]
 gi|167918019|ref|ZP_02505110.1| methionyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
 gi|254298272|ref|ZP_04965724.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
 gi|68565972|sp|Q63W90|SYM_BURPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187647709|sp|A3NSL6|SYM_BURP0 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52209054|emb|CAH34994.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
 gi|126227701|gb|ABN91241.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
 gi|157808199|gb|EDO85369.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|317182290|dbj|BAJ60074.1| methionyl-tRNA synthetase [Helicobacter pylori F57]
          Length = 653

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|317012812|gb|ADU83420.1| methionyl-tRNA synthetase [Helicobacter pylori Lithuania75]
          Length = 650

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSASLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|294494696|ref|YP_003541189.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292665695|gb|ADE35544.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 567

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 25/72 (34%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+ R  I+ D L R+LR    +    Y  N       I+  A +     P   
Sbjct: 123 PNGPLHVGHIRNSIIGDTLTRILRKAGYDVDAQYYVNDMGRQIAIVSWALEHFEMDPDLK 182

Query: 95  AISIITSKNTQQ 106
           +   I +   + 
Sbjct: 183 SDHAIANVYIKA 194


>gi|254774038|ref|ZP_05215554.1| methionyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
           25291]
          Length = 519

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+A   I  D + R  R    +     VR +T  D+  ++       +     
Sbjct: 13  PNGDPHVGHAYEYIATDAIARFKRLDGFD-----VRFLTGTDEHGLK---MVETAAAEGI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
             + +  +N+  F +   RL   +     R T  +H      + + +   G  Y  +   
Sbjct: 65  DTAELARRNSDVFQRLQERLNI-SFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123

Query: 153 IFDTS 157
            +   
Sbjct: 124 WYSVR 128


>gi|217970195|ref|YP_002355429.1| isoleucyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507522|gb|ACK54533.1| isoleucyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 942

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 7/76 (9%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D      ++  H   ++  GRKMSKS GN +   E+            A ++RL + 
Sbjct: 590 CAIDGHAPYRSLLTHGFAVDGAGRKMSKSLGNVVVPQEVTGKLG-------AEILRLWVA 642

Query: 313 MTHYREPIDFTVQRLT 328
            T Y   +  + + L 
Sbjct: 643 STDYSGELSISKEILD 658


>gi|254447495|ref|ZP_05060961.1| isoleucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198262838|gb|EDY87117.1| isoleucyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 673

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
            I     +  H   ++  G KMSKS GN I   E++ +         A ++RL +  + Y
Sbjct: 579 GIPPYKQVMTHGFTVDSHGHKMSKSQGNGIEPQEIINSLG-------ADILRLWVASSDY 631

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
              +  + + L        +   T
Sbjct: 632 THEMTLSQEILKRTADSYRRMRNT 655


>gi|169634386|ref|YP_001708122.1| leucyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|238688110|sp|B0VKP9|SYL_ACIBS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169153178|emb|CAP02268.1| leucyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 874

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +   S   ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   S K     ++D+     A   +L +  
Sbjct: 744 IAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA 780


>gi|167718572|ref|ZP_02401808.1| methionyl-tRNA synthetase [Burkholderia pseudomallei DM98]
 gi|167893288|ref|ZP_02480690.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 7894]
 gi|237811322|ref|YP_002895773.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
 gi|237504542|gb|ACQ96860.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|157124563|ref|XP_001654107.1| isoleucyl tRNA synthetase [Aedes aegypti]
 gi|108873953|gb|EAT38178.1| isoleucyl tRNA synthetase [Aedes aegypti]
          Length = 863

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        +++H   ++ +G KMSKS GN I+  +++       + +    +R  +
Sbjct: 521 SVAARNESPYRALFVHGFAVDEKGMKMSKSLGNIISPKDIV-------KQYGCDTLRWWV 573

Query: 312 LMT 314
              
Sbjct: 574 AAH 576


>gi|76810283|ref|YP_332622.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254260859|ref|ZP_04951913.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
 gi|123599931|sp|Q3JUY1|SYM_BURP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76579736|gb|ABA49211.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
 gi|254219548|gb|EET08932.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|226194485|ref|ZP_03790083.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225933570|gb|EEH29559.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 717

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368


>gi|215484666|ref|YP_002326901.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|226731221|sp|B7H051|SYL_ACIB3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|213987319|gb|ACJ57618.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 874

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +   S   ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   S K     ++D+     A   +L +  
Sbjct: 744 IAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA 780


>gi|171920420|ref|ZP_02931738.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|186701743|ref|ZP_02971430.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
 gi|171902863|gb|EDT49152.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
           27813]
 gi|186701013|gb|EDU19295.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
           27818]
          Length = 806

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVSTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  +E++ +         A  +R+  M M      + ++   L      L +  +  
Sbjct: 586 GNVINPDEIIASHG-------ADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIID 348
            +   ++
Sbjct: 639 HNLSELE 645


>gi|169797225|ref|YP_001715018.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|184156869|ref|YP_001845208.1| leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213155981|ref|YP_002318026.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260556107|ref|ZP_05828326.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301346500|ref|ZP_07227241.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301509990|ref|ZP_07235227.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301594195|ref|ZP_07239203.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|332851270|ref|ZP_08433343.1| leucine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332866139|ref|ZP_08436854.1| leucine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332874055|ref|ZP_08441990.1| leucine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|226731222|sp|B7I5I5|SYL_ACIB5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238688028|sp|B0V5H2|SYL_ACIBY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690966|sp|B2HTC4|SYL_ACIBC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|169150152|emb|CAM88046.1| leucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|183208463|gb|ACC55861.1| Leucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|213055141|gb|ACJ40043.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|260410162|gb|EEX03461.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|322506763|gb|ADX02217.1| leuS [Acinetobacter baumannii 1656-2]
 gi|323516634|gb|ADX91015.1| leucyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
 gi|332730150|gb|EGJ61477.1| leucine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734780|gb|EGJ65874.1| leucine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332737796|gb|EGJ68688.1| leucine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 874

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +   S   ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   S K     ++D+     A   +L +  
Sbjct: 744 IAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA 780


>gi|167814737|ref|ZP_02446417.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 91]
 gi|217419503|ref|ZP_03451009.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
 gi|217396807|gb|EEC36823.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
          Length = 717

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368


>gi|121598252|ref|YP_993613.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124385371|ref|YP_001028926.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
 gi|126450764|ref|YP_001081161.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
 gi|167003048|ref|ZP_02268838.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
 gi|238563610|ref|ZP_00438586.2| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|254177483|ref|ZP_04884138.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|254199383|ref|ZP_04905749.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|254205698|ref|ZP_04912050.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|254357859|ref|ZP_04974132.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|121227062|gb|ABM49580.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
 gi|124293391|gb|ABN02660.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10229]
 gi|126243634|gb|ABO06727.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10247]
 gi|147748979|gb|EDK56053.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
 gi|147753141|gb|EDK60206.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
 gi|148026986|gb|EDK85007.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
 gi|160698522|gb|EDP88492.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
 gi|238520348|gb|EEP83809.1| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
 gi|243061352|gb|EES43538.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
          Length = 717

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368


>gi|52081521|ref|YP_080312.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52786900|ref|YP_092729.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319647431|ref|ZP_08001652.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
 gi|60390680|sp|Q65FX8|SYL_BACLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52004732|gb|AAU24674.1| leucyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52349402|gb|AAU42036.1| LeuS [Bacillus licheniformis ATCC 14580]
 gi|317390477|gb|EFV71283.1| leucyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
          Length = 804

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 37/98 (37%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ET         A  +RL  M M   
Sbjct: 557 KEPFKQLYNQGMILGENNEKMSKSKGNVVNPDEIVETHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W       G ++  ++ 
Sbjct: 610 DASIAWSTTGLDGARRFLDRVWRLFIDDNGGLNEKIVE 647


>gi|239500747|ref|ZP_04660057.1| leucyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 874

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +   S   ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   S K     ++D+     A   +L +  
Sbjct: 744 IAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA 780


>gi|167901747|ref|ZP_02488952.1| methionyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 725

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|242314917|ref|ZP_04813933.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
 gi|254190803|ref|ZP_04897310.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|157938478|gb|EDO94148.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
 gi|242138156|gb|EES24558.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
          Length = 717

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368


>gi|157964504|ref|YP_001499328.1| leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|166980080|sp|A8F1J5|SYL_RICM5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157844280|gb|ABV84781.1| Leucyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 835

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 16/152 (10%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  +  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNEFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN--- 360
             IRL +L  +   + ++++   +      ++K      +   +   V S +  +LN   
Sbjct: 623 DAIRLFVLSDSPPEKDLEWSASGIEGCSRFINKLEYMFKAIDSLKDDVNSEINKELNRLV 682

Query: 361 --TVSAIQAL---HKLARESTKNHDLLPIFNA 387
             T+  +        L R   +  +L    +A
Sbjct: 683 HFTIKLVAEDIKHFALNRAIARMRELSNAISA 714


>gi|187649793|sp|A3N6Y1|SYM_BURP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 725

 Score = 40.6 bits (94), Expect = 0.54,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|299771580|ref|YP_003733606.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298701668|gb|ADI92233.1| leucyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 874

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 44/167 (26%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +   S   ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVAGFLEKGNSASTIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
           I AL +L   S K     ++D+     A   +L  +E    HL++ +
Sbjct: 744 IAALMELLNASNKFEAKDDNDIAVEREAITTLLTLLEPFAPHLSQTL 790


>gi|269796329|ref|YP_003315784.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
 gi|269098514|gb|ACZ22950.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
          Length = 536

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 46/119 (38%), Gaps = 10/119 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P V    H+G+A  ++  DVL R  R    +     VR  +  DD  ++       +   
Sbjct: 11  PYVNGRPHLGHALELVHVDVLARHRRLRGAQ-----VRVQSGTDDHALK---NVSAASLA 62

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
              ++ + + N  +FV+    L          +++  H P ++ L +     G  Y+ +
Sbjct: 63  GVPVADLVAANGDRFVELVDALGVRTDEFVRTSSDPRHAPGVVALWEACRAAGDLYQKD 121


>gi|145630903|ref|ZP_01786680.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021]
 gi|144983563|gb|EDJ91031.1| methionyl-tRNA synthetase [Haemophilus influenzae R3021]
          Length = 464

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 65/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 72  HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFTH-GYVTVDGAKMSKSRGTFIQASTYLN 129

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 130 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLDDFVQRVNTDIVNKLVNLA 174

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 175 SRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIAAYYESREYNKAIREIMALTDKANK 234

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 235 YIDEKAPWVIAK 246


>gi|134281206|ref|ZP_01767915.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
 gi|134247512|gb|EBA47597.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
          Length = 717

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368


>gi|116690457|ref|YP_836080.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
 gi|162218052|ref|YP_621702.2| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
 gi|187647708|sp|A0K9L0|SYM_BURCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|187649797|sp|Q1BUH6|SYM_BURCA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116648546|gb|ABK09187.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
          Length = 718

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|92117538|ref|YP_577267.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91800432|gb|ABE62807.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 659

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 50/132 (37%), Gaps = 13/132 (9%)

Query: 35  VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           VY     HIG+A   I  DVL R  R     K V ++    +   K+++ A++E      
Sbjct: 157 VYPNGAPHIGHAYEAIATDVLARFQRLDG--KDVFFLTGTDEHGQKMVQTAQKE------ 208

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANN 150
           N +   + ++N +   K    L   +     R +   H   +  + + +  +G  Y ++ 
Sbjct: 209 NISALELATRNAELLRKLDETLNI-SFNRFIRTSEPAHHHSVQEIWKRMAANGDIYLSSY 267

Query: 151 EIIFDTSSIPNY 162
              +       Y
Sbjct: 268 AGWYSVRDEAYY 279


>gi|84502708|ref|ZP_01000827.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
 gi|84389103|gb|EAQ01901.1| valyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
          Length = 1065

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 49/118 (41%), Gaps = 11/118 (9%)

Query: 194 WKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           W+ +  ++  + S  W  G  GW  E   M   Y      +   G D++F      +   
Sbjct: 629 WREADVLDTWFSSGLWPIGTLGWPDETPEM-KKYFPTS--VLVTGQDILFFWVARMMMMQ 685

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                 +  +++++H    + +G+KMSK+ GN I   E+++        + A  +R A
Sbjct: 686 LAVVGEKPFSDVYLHGLVRDAKGKKMSKTVGNVIDPLEIID-------EYGADALRFA 736


>gi|325568223|ref|ZP_08144631.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
 gi|325158256|gb|EGC70408.1| leucine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
          Length = 804

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 62/193 (32%), Gaps = 20/193 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFEKLFNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++         + A  +RL  M M      I +    L  +   L + W    
Sbjct: 583 NVVNPDDVIN-------QYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
              G +   + +      N     +  ++  ++ T++++ L    A + ++         
Sbjct: 636 DENGKMRDRITT-----FNDGKLSKVYNQTVKKVTEDYEQLHFNTAISQLMVFVNEAYKA 690

Query: 402 NKNISIAIEKLVQ 414
           +      +E  VQ
Sbjct: 691 DALPYEYVEGFVQ 703



 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 43/145 (29%), Gaps = 19/145 (13%)

Query: 14  KITEFQAID-PSNIRMYVCGPTVYDFA---HIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           K  EF   D P   + Y      Y      H+G+       D+L R  R       V + 
Sbjct: 18  KKNEFNTHDEPDKPKFYALDMFPYPSGQGLHVGHPEGYTATDILSRFKRSQGYN--VLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQPRATNH 128
                      + A      +   +  +  T KN + F +    L        +   T+ 
Sbjct: 76  MGWDAFGLPAEQYA------LDTGNDPAEFTKKNIETFRRQINALGFSYDWNREINTTD- 128

Query: 129 IPQMIYLIQ----NIILHGHAYEAN 149
            P+     Q     +   G AYEA 
Sbjct: 129 -PEYYKWTQWIFTKLYEKGLAYEAE 152


>gi|310825918|ref|YP_003958275.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
 gi|308737652|gb|ADO35312.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
          Length = 641

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 13/132 (9%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           YV  P  Y     HIG+    +  D L R       +  +     IT ID+      + E
Sbjct: 6   YVTTPIYYPSSDLHIGHTYTTVAADTLKRFKALQGYDAYM-----ITGIDEH---GQKIE 57

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGH 144
             +     +      +     + +  +L  +      R T   H+  +  + + +   G 
Sbjct: 58  KVAEEKGMSAQAFVDE-EAARIAELWKLMRIDHDQLIRTTDPEHMKTIQRIFKKLYDQGD 116

Query: 145 AYEANNEIIFDT 156
            Y+   E  + T
Sbjct: 117 IYKGKYEGWYCT 128


>gi|260944850|ref|XP_002616723.1| hypothetical protein CLUG_03964 [Clavispora lusitaniae ATCC 42720]
 gi|238850372|gb|EEQ39836.1| hypothetical protein CLUG_03964 [Clavispora lusitaniae ATCC 42720]
          Length = 959

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 1/82 (1%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-TKKFGGRSWPAPVIRLAMLMTHYRE 318
               I  H   L+ +  KMSKS GN ++  ++++   +          +RL     +Y +
Sbjct: 611 PFRKIITHGFTLDSKNAKMSKSAGNVVSPQQVVDGGGRPHVAPLGPDGLRLWAASCNYTQ 670

Query: 319 PIDFTVQRLTEAEILLSKWPQT 340
            ++ T + L      + K   T
Sbjct: 671 DVNVTPEVLARVGENIRKLRVT 692


>gi|260833030|ref|XP_002611460.1| hypothetical protein BRAFLDRAFT_63907 [Branchiostoma floridae]
 gi|229296831|gb|EEN67470.1| hypothetical protein BRAFLDRAFT_63907 [Branchiostoma floridae]
          Length = 1179

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 55/148 (37%), Gaps = 33/148 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DL+  H    +   C    D  +K       NG L L   KMSKS GNF+T
Sbjct: 665 PVDLRVSGKDLVPNHLTYFLYNHCAIWPDSKDKWPQGVRANGHLLLNSEKMSKSTGNFLT 724

Query: 288 IN-------------------ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           ++                   + +E   F  R   A ++RL          +++  + L 
Sbjct: 725 LSGAIEKFSADGMRLALADAGDTVEDANFVERMADAGILRLY-------TWLEWVKEMLA 777

Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALY 356
             +  L   P T+ S    D A +S++ 
Sbjct: 778 T-KDTLRGGPPTNWS----DRAFVSSMN 800


>gi|171778693|ref|ZP_02919789.1| hypothetical protein STRINF_00641 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282650|gb|EDT48074.1| hypothetical protein STRINF_00641 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 932

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 69/181 (38%), Gaps = 20/181 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTV-SAIQ 366
                   +  +++ L +      K   T      +    +P   +    DL +V   I 
Sbjct: 623 ASVDTDADVRVSMEILGQVSETYRKIRNTLRFLIANTTDFNPNEDAVACEDLRSVDKYIT 682

Query: 367 A----LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQERLILLK 421
                L    R++ +++D + I+ A  + + +++   +L+    +  IE       I  +
Sbjct: 683 VKFNQLVATIRKAYEDYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEA---ADNIARR 739

Query: 422 M 422
            
Sbjct: 740 Q 740



 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 12/132 (9%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--R 84
           GP  Y     H+G+A   I  D++ R                   +  I+  + ++   R
Sbjct: 55  GP-PYANGNIHVGHAMNKISKDIIVRSKSMSGFCAPYVPGWDTHGLP-IEQVLAKKGVKR 112

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           +E P     +           +  +D  RL   A    P  T    +    I +   +  
Sbjct: 113 KEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYVTLIPAYEAAQIRVFGAMAD 172

Query: 142 HGHAYEANNEII 153
            G+ Y     + 
Sbjct: 173 KGYIYRGAKPVY 184


>gi|126651278|ref|ZP_01723485.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126591807|gb|EAZ85890.1| leucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 720

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 14/124 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E+         A  +RL  M M      + ++   L  A   L +  +   
Sbjct: 583 NVVNPDEIIESHG-------ADTLRLYEMFMGPLEASVAWSTNGLDGARRFLDRIWRLLV 635

Query: 343 SKGI 346
           ++  
Sbjct: 636 NEED 639


>gi|66501629|ref|XP_395743.2| PREDICTED: leucyl-tRNA synthetase, cytoplasmic-like isoform 1 [Apis
           mellifera]
          Length = 1181

 Score = 40.6 bits (94), Expect = 0.55,   Method: Composition-based stats.
 Identities = 28/86 (32%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N IA      + E        NG L L   KMSKS GNF
Sbjct: 665 PVDLRVSGKDLIQNHLTFFIYNHIAIWS--KQPELWPKGIRANGHLLLNSSKMSKSEGNF 722

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E +E        + A  +RL +
Sbjct: 723 LTLAEAVE-------KFSADGMRLCL 741


>gi|295704836|ref|YP_003597911.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294802495|gb|ADF39561.1| isoleucyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 1032

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           ++    K F  D+   G+D       + +A S           +      L+  G+KMSK
Sbjct: 534 NNELFRKQFPADVIAEGIDQTRGWFYSLMAVSTLFTGKAPYKRVLSLGHVLDENGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEILL 334
           S GN +   EL+ T       + A  +R A+L     +  P  F+ + + EA+  +
Sbjct: 594 SKGNALDPVELIHT-------FGADALRWAILADSAPW-NPKKFSERVVQEAKSKV 641


>gi|291166390|gb|EFE28436.1| methionine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 642

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 21/142 (14%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
             YV  P  Y     HIG+    +  D + R  R+   +  V ++    +  +KI ++AR
Sbjct: 5   TFYVTTPIYYPSGRLHIGHTYTTVAADAISRYKRFAGFD--VRFLTGTDEHGEKIQKKAR 62

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRL-ACLAP--THQPRATN--HIPQMIYLIQNI 139
           +      I               + D  +L   +        R T   H  ++  + Q +
Sbjct: 63  EMGLEPII----------YLDNMISDIKKLWNVMEISYDDFIRTTESRHEERVQKIFQKL 112

Query: 140 ILHGHAY--EANNEIIFDTSSI 159
              G  Y  E       +  + 
Sbjct: 113 YDQGDIYLGEYEGHYCVECEAF 134


>gi|316934061|ref|YP_004109043.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
 gi|315601775|gb|ADU44310.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
          Length = 514

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     + V ++    +   K+I+ A++E        
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDG--RDVFFLTGTDEHGLKMIQTAQRE------GM 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
             + + ++N  +F +D      ++     R +   H   +  + + +   G  Y  +   
Sbjct: 68  TPAELAARNAGRF-RDMDDRFGISYDRFIRTSEEQHHASVQEVWKRMQASGDIYLDSYSG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAYY 136


>gi|194017123|ref|ZP_03055735.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194010991|gb|EDW20561.1| valyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 880

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q       +   ++ IH    + +GRKMSKS GN I   E+++  
Sbjct: 484 TGYDIIFFWVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVID-- 541

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 542 -----KYGADSLRYFLATGS--SPGQDLRFSFEKVESTWNFANKIWNASR 584


>gi|157693210|ref|YP_001487672.1| valyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157681968|gb|ABV63112.1| valine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 880

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q       +   ++ IH    + +GRKMSKS GN I   E+++  
Sbjct: 484 TGYDIIFFWVSRMIFQGLEFTGEKPFKDVLIHGLIRDEQGRKMSKSLGNGIDPMEVID-- 541

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++       +K    S 
Sbjct: 542 -----KYGADSLRYFLATGS--SPGQDLRFSFEKVESTWNFANKIWNASR 584


>gi|119512207|ref|ZP_01631297.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
 gi|119463173|gb|EAW44120.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
          Length = 533

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 40/125 (32%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   I  DV+ R  R    E     V  IT  D+      + +  +  +  
Sbjct: 20  VNDVPHVGSAYTTIAADVVARFHRLLGHE-----VLLITGTDEH---GQKIQRSAESLGK 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHAYEANNEI 152
                  +    F+K    L         R  A+ H   +      +   G  Y+   + 
Sbjct: 72  PPQEFCDQIVPSFIKLWQLLNIQY-DRFSRTTASRHEAIVKEFFMRVWEKGDIYQGKQKG 130

Query: 153 IFDTS 157
            +  S
Sbjct: 131 WYCVS 135


>gi|325577505|ref|ZP_08147867.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160609|gb|EGC72733.1| leucine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
          Length = 862

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 43/142 (30%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHTGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKW------PQTSTSKGIIDPAVLSA---------------LYND---- 358
              +  A+  L +          + +K  +D   LSA               + +D    
Sbjct: 660 ESGVEGAKRFLGRVWNLVYEYSQNPAKTALDVTALSADQKALRRDVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKN 378
              NT  AI A+ +L  + T+ 
Sbjct: 720 QTFNT--AIAAVMELMNKLTRA 739


>gi|237750710|ref|ZP_04581190.1| isoleucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229373800|gb|EEO24191.1| isoleucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 975

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  +       I  H   ++ +  KMSKS GN +  ++++           + ++RL + 
Sbjct: 640 CAINHKAPFKTIITHGFTIDEKSEKMSKSKGNVLAPSKIISESG-------SEILRLWVA 692

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
           ++ Y+  +  +   L +      K   T
Sbjct: 693 LSDYQNDVKISQNILKQVSENYLKLRNT 720


>gi|222111905|ref|YP_002554169.1| isoleucyl-tRNA synthetase [Acidovorax ebreus TPSY]
 gi|221731349|gb|ACM34169.1| isoleucyl-tRNA synthetase [Acidovorax ebreus TPSY]
          Length = 951

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +G+KMSKS GN ++  E+            A +IRL  
Sbjct: 609 ASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVSPQEV-------SGKLGAEIIRLWC 661

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
             T Y   +    + L        +   T      +    DPA
Sbjct: 662 AATDYSGDLAIDDKILARVVDAYRRIRNTLRFLLANVSDFDPA 704


>gi|210622352|ref|ZP_03293121.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
 gi|210154340|gb|EEA85346.1| hypothetical protein CLOHIR_01069 [Clostridium hiranonis DSM 13275]
          Length = 1039

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 10/86 (11%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ +++  L+ +G+KMSKS GN +   EL +        + A  +R
Sbjct: 568 LAISTFVMGKAPYKNVLVNDLVLDKDGKKMSKSRGNTVNPFELFD-------KYGADALR 620

Query: 309 LAML--MTHYREPIDFTVQRLTEAEI 332
             +L     +  PI F  + L E + 
Sbjct: 621 WYLLYVSPPW-TPIRFDEEGLKEVQS 645


>gi|152992964|ref|YP_001358685.1| valyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
 gi|151424825|dbj|BAF72328.1| valyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
          Length = 878

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 10/100 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL--AMLM 313
                  +I++H    + +G KMSKS GN I    ++E        +    +R   A+L 
Sbjct: 517 TGELPFKDIYLHALVKDEKGEKMSKSKGNVIDPLVMIE-------KYSTDALRFTLAVLA 569

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
              R  I  + ++L ++    +K    +    +       
Sbjct: 570 VQGR-DIKLSEEKLEQSRNFTNKLFNATNYLQLNQDTFED 608


>gi|126178353|ref|YP_001046318.1| isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
 gi|166229750|sp|A3CSI6|SYI_METMJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125861147|gb|ABN56336.1| Isoleucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
          Length = 1059

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 12/87 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       ++ +H   L+ +GRKMSKS GN +T  E++         +   V+R  +
Sbjct: 566 STVAFGRAPYKSVLMHGFALDADGRKMSKSFGNVVTPEEVMN-------QFGVDVLRFYV 618

Query: 312 LMTHYREPID---FTVQRLTEAEILLS 335
           L      P D   F    +      L+
Sbjct: 619 LWA--NAPWDDLKFNWDSVKTIHRTLN 643


>gi|121595699|ref|YP_987595.1| isoleucyl-tRNA synthetase [Acidovorax sp. JS42]
 gi|120607779|gb|ABM43519.1| Isoleucyl-tRNA synthetase [Acidovorax sp. JS42]
          Length = 951

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +G+KMSKS GN ++  E+            A +IRL  
Sbjct: 609 ASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVSPQEV-------SGKLGAEIIRLWC 661

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
             T Y   +    + L        +   T      +    DPA
Sbjct: 662 AATDYSGDLAIDDKILARVVDAYRRIRNTLRFLLANVSDFDPA 704


>gi|126440819|ref|YP_001058102.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 668]
 gi|167909986|ref|ZP_02497077.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 112]
 gi|254196314|ref|ZP_04902738.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
 gi|126220312|gb|ABN83818.1| methionine--tRNA ligase [Burkholderia pseudomallei 668]
 gi|169653057|gb|EDS85750.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
          Length = 717

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368


>gi|163848199|ref|YP_001636243.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222526104|ref|YP_002570575.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
 gi|163669488|gb|ABY35854.1| valyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
 gi|222449983|gb|ACM54249.1| valyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
          Length = 923

 Score = 40.6 bits (94), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +++H    +  GRKMSKS GN +   +++E        + A  +R  ++
Sbjct: 520 CYFTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVNPLDIIE-------QYGADALRYTLV 572

Query: 313 MTHYREP---IDFTVQRLTEAEILLSKW 337
            +    P   ++   QR+  A    +K 
Sbjct: 573 TSG--TPGQDVNLNPQRIESARNFANKI 598


>gi|331703680|ref|YP_004400367.1| Leucyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802235|emb|CBW54389.1| Leucyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 804

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 48/137 (35%), Gaps = 25/137 (18%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++     L  + RKMSKS GN I  +++++T         +  +RL  M M    
Sbjct: 562 EPFKRLFNQGMILGPDNRKMSKSWGNVINPDDVIDTHG-------SDALRLYEMFMGPLD 614

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGI--IDPAVLSALYND-------------LNTV 362
             + ++   L  +   L++  +          +   L  +YND              NT 
Sbjct: 615 ASLPWSFDGLDASLKWLNRCYRMINKIEFSNTNNHKLDYVYNDVVKKVTQMIQELKFNT- 673

Query: 363 SAIQALHKLARESTKNH 379
            AI  L  L     K  
Sbjct: 674 -AISQLMVLVNAIYKEE 689


>gi|320169068|gb|EFW45967.1| leucyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
          Length = 905

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 43/159 (27%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D L R   +    + V +              A      I  
Sbjct: 108 PYPSGHLHMGHVRVYTLSDCLARF--HAMNGRQVLHPMGWDAFGLPAENAA------IER 159

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
             A    T KN +   K   RL   A       T   P      Q     ++  G AY  
Sbjct: 160 GVAPGEWTIKNIEYMRKQLQRLGM-AFDWSKEVTTCAPDYYRWTQWIFLRLLKAGLAYRK 218

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           N  +              +  ++DE     R      +K
Sbjct: 219 NAVVNWDPVDQT----VLANEQVDENGRSWRSGAVVEQK 253


>gi|295695330|ref|YP_003588568.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
 gi|295410932|gb|ADG05424.1| valyl-tRNA synthetase [Bacillus tusciae DSM 2912]
          Length = 890

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+I+      I  S           ++IH    + +GRKMSKS GN I   ++
Sbjct: 489 DVLVTGFDIIYFWVARMIFMSLAFTGEVPFHTVYIHGLVRDSQGRKMSKSLGNGIDPLDV 548

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTST 342
           +         + A  +R  +       P +   F  +++  A    +K    + 
Sbjct: 549 VN-------KYGADALRFMLASG--TAPGNDQRFYWEKVESARHFANKIWNAAR 593


>gi|260892210|ref|YP_003238307.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
 gi|260864351|gb|ACX51457.1| valyl-tRNA synthetase [Ammonifex degensii KC4]
          Length = 882

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I              ++IH   L+  GRKMSKS GN +   E++
Sbjct: 482 VLVTGRDIIFFWVARMIFMGLKFMGDVPFREVFIHGLVLDALGRKMSKSLGNGVDPLEVI 541

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           E+         A  +R  ++  +   P   + F  +RL  A   ++K    S 
Sbjct: 542 ESHG-------ADSLRFMLVTGN--TPGNDLRFHFERLDGARNFINKLWNASR 585


>gi|241766699|ref|ZP_04764539.1| isoleucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241362967|gb|EER58656.1| isoleucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 949

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   ++ +G+KMSKS GN ++  E+            A +IRL  
Sbjct: 607 ASAIYGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVSPQEV-------SGKLGAEIIRLWC 659

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
             T Y   +    + L        +   T      +    DPA
Sbjct: 660 AATDYSGDLAIDDKILARVVDAYRRIRNTLRFLLANVSDFDPA 702


>gi|224476754|ref|YP_002634360.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|254783557|sp|B9DND4|SYV_STACT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|222421361|emb|CAL28175.1| valyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 876

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 20/164 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   +++   
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTGERPFDDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIN-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
                 + A  +R  +       P   + ++ +++      ++K W     S   I    
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAARFSIMNIGEEF 589

Query: 352 LSALYNDLNTVSAIQALHKLA----RESTKNHDLLPIFNASAHI 391
               + D++    +    K       E+ K    L        +
Sbjct: 590 K---FEDIDLSKNLSLADKWILTRLNETIKTVTDLSDRYEFGEV 630


>gi|220926267|ref|YP_002501569.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219950874|gb|ACL61266.1| valyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 903

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 19/139 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--L 312
           A        ++IH    + +G KMSKS GN +   +L++        + A  +R  +  +
Sbjct: 526 AMDEVPFRTVYIHALVRDEKGAKMSKSKGNVVDPLDLVDR-------YGADALRFTLAAM 578

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----IDPAVL-SALYNDLNTVSAIQA 367
               R  I  ++QR+       +K    +    +    IDPA    AL   LN   A   
Sbjct: 579 AAQGR-DIKLSIQRVEGYRNFATKLWNAARFAEMNGCRIDPAFRPEALRETLN---AWA- 633

Query: 368 LHKLARESTKNHDLLPIFN 386
           L + AR   +    L  F 
Sbjct: 634 LGEAARAVAEVTAALDAFR 652


>gi|332358258|gb|EGJ36086.1| valine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 882

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTDRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGADALRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|317177788|dbj|BAJ55577.1| methionyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 647

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137


>gi|311695364|gb|ADP98237.1| leucyl-tRNA synthetase [marine bacterium HP15]
          Length = 861

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 46/140 (32%), Gaps = 37/140 (26%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N I    +++          A  +RL M+      + ++++   +  A   L 
Sbjct: 620 KMSKSKNNGIDPQAIIDEHG-------ADTVRLFMMFAAPPEQSLEWSDSGVEGAHRFLK 672

Query: 336 KWPQTSTSKGIIDPA---VLSALYND------------------------LNTVSAIQAL 368
           +  +      +  PA     ++L +D                         NT  AI A+
Sbjct: 673 RVWRLVNEHAVAGPAPALDAASLNDDQKNLRRKTHETIAKVSDDISRRLTFNT--AIAAV 730

Query: 369 HKLARESTKNHDLLPIFNAS 388
            +L  E  K     P   A 
Sbjct: 731 MELLNEVGKLQGDEPQTRAV 750



 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 48/178 (26%), Gaps = 20/178 (11%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           +P   + Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  EPGKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVISRYQRMQG--KNVMQPMGWDAFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYL 135
              A      I    A +  T  N +       +L       +  AT        +  + 
Sbjct: 87  ENAA------IANKTAPAKWTYANIEYMKNQLKQLGFGYDWDRELATCKPDYYRWEQWFF 140

Query: 136 IQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
              +   G  Y+  + +              +  ++ + +          KK P  FI
Sbjct: 141 -ARLYEKGLVYKKMSTVNWDPVDQT----VLANEQVVDGRGWRSGALVEQKKIPQWFI 193


>gi|306820218|ref|ZP_07453861.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304551764|gb|EFM39712.1| isoleucine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 1036

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 15/114 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IA +   D +    N+ +++  L+  G+KMSKS GN +   EL E        + A  +R
Sbjct: 564 IAIATYVDGVSPYKNVLVNDLILDKNGKKMSKSKGNTVDPFELFE-------QYGADALR 616

Query: 309 LAML--MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
             +L     +  P  F +  L E +         ST K I +  VL A  +D++
Sbjct: 617 WYLLYVSPAW-SPTKFDIDGLKEVQSKF-----FSTIKNIYNFFVLYANTDDID 664


>gi|188518664|ref|ZP_03004101.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|188997721|gb|EDU66818.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
          Length = 874

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 23/145 (15%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
                ++ IH    + +G+KMSKS GN I   +++         +    +RL        
Sbjct: 504 KRPFKDVLIHGLIRDAQGKKMSKSLGNGIDPFDIIN-------EYGLDTMRLFFAS---- 552

Query: 318 EP-----IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS-ALYN-----DLNTVSAIQ 366
                  ++F+ +RL      L+K    +     +D    S ++ +     D+N    I 
Sbjct: 553 STTVGEDLNFSTERLGANWNYLNKIWNIAKYIENLDEINESFSIQDVHEFCDVNKWI-IA 611

Query: 367 ALHKLARESTKNHDLLPIFNASAHI 391
            L KL+ E  KN D   +  A+  +
Sbjct: 612 ELSKLSVEMNKNMDKYNLVVATKDL 636


>gi|183508707|ref|ZP_02958193.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
 gi|182675629|gb|EDT87534.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
           33697]
          Length = 806

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 24/173 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYSRFWHRFLYDIGVVPTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++ +         A  +R+  M M      + +    L      L +  +  
Sbjct: 586 GNVINPDDIIASHG-------ADTLRIYEMFMGPLTASLPWNPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIIDPAVLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHIL 392
            +   ++         DLN ++   I A H L +  TK  +      A + ++
Sbjct: 639 HNLSELEVV------EDLNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISEMM 685


>gi|167835830|ref|ZP_02462713.1| methionyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
          Length = 718

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|115633827|ref|XP_784868.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
 gi|115924504|ref|XP_001197522.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
          Length = 913

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 45/115 (39%), Gaps = 2/115 (1%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   D++  G D      +  +  S  A       ++ +H   L+ EGRKMSKS GN + 
Sbjct: 529 GHQADVYIEGEDQYGAWFQTSLLTSVAAQGTAPYRSVLVHGFALDAEGRKMSKSLGNVVN 588

Query: 288 INELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            + ++   K   +   + A V+R  M  + +   I+            + K   T
Sbjct: 589 PDVIVGGGKNKKKEPAYGADVLRWRMADSDWMGRINVGPDLFAMTNQNIIKLRNT 643


>gi|58337125|ref|YP_193710.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|81311485|sp|Q5FKU5|SYI_LACAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58254442|gb|AAV42679.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 927

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N++++          A +IRL +
Sbjct: 569 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMG-------AEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 622 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENGVAYDDLRSVDQYME 681

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L  E    +D          I   
Sbjct: 682 IKLNDLVAECLAAYDKFDFTTVFKKIFNF 710


>gi|13357931|ref|NP_078205.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|170762455|ref|YP_001752454.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
 gi|14285782|sp|Q9PQC0|SYL_UREPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083178|sp|B1AJ10|SYL_UREP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|11271161|pir||F82899 leucyl-tRNA synthetase UU371 [imported] - Ureaplasma urealyticum
 gi|6899353|gb|AAF30780.1|AE002134_4 leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           700970]
 gi|168828032|gb|ACA33294.1| leucyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
           27815]
          Length = 806

 Score = 40.6 bits (94), Expect = 0.57,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 24/173 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYSRFWHRFLYDIGVVPTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++ +         A  +R+  M M      + +    L      L +  +  
Sbjct: 586 GNVINPDDIIASHG-------ADTLRIYEMFMGPLTASLPWNPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIIDPAVLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHIL 392
            +   ++         DLN ++   I A H L +  TK  +      A + ++
Sbjct: 639 HNLSELEVV------EDLNKLNEEIIIAYHTLIKNYTKAINEQAFNIAISEMM 685


>gi|227903700|ref|ZP_04021505.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868587|gb|EEJ76008.1| isoleucyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 927

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 50/149 (33%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N++++          A +IRL +
Sbjct: 569 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMG-------AEIIRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y+DL +V     
Sbjct: 622 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENGVAYDDLRSVDQYME 681

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L  E    +D          I   
Sbjct: 682 IKLNDLVAECLAAYDKFDFTTVFKKIFNF 710


>gi|218661213|ref|ZP_03517143.1| isoleucyl-tRNA synthetase [Rhizobium etli IE4771]
          Length = 534

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 51/161 (31%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 183 SAATRGRAPYDAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 235

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA---- 364
           + + Y + +      +        K   T          D     AL +           
Sbjct: 236 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDRGEEIALAD---LPELEQLM 292

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L +L RE+    D   I  A      +E+   + +
Sbjct: 293 LHRLAELDQLVRENYDAFDFKKIARALIDFANVELSAFYFD 333


>gi|134296619|ref|YP_001120354.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
 gi|187647710|sp|A4JGW6|SYM_BURVG RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|134139776|gb|ABO55519.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
          Length = 721

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 38/100 (38%), Gaps = 21/100 (21%)

Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           RPG      A +  Y       H  G D+++ H     A            N++ H GFL
Sbjct: 298 RPG------ATAEQY-------HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFL 342

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            ++G KMSKS G FIT    ++T            +R   
Sbjct: 343 TVDGAKMSKSRGTFITAQSYIDT------GLNPEWLRYYF 376



 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 25/78 (32%), Gaps = 8/78 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V Y+         I+ RA  E            
Sbjct: 33  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYIGADDTHGTPIMLRAEMEGL------TPKQ 84

Query: 99  ITSKNTQQFVKDTTRLAC 116
           +  +   +  +D      
Sbjct: 85  LIDRVWAEHKRDFDSFGV 102


>gi|308063822|gb|ADO05709.1| methionyl-tRNA synthetase [Helicobacter pylori Sat464]
          Length = 650

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 10/136 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-QEHPSIPIN 93
           V D  HIG+A   ++ D L +       E  V ++    +   KI + AR +        
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFFLTGTDEHGQKIEQSARLRNQSPKAYA 70

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           D+IS I       F  D         +   +   +  ++      +   G  Y+      
Sbjct: 71  DSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEI------MFEKGDIYKGAYSGY 124

Query: 154 FDTSSIPNYGSFSRRK 169
           +   S  +Y + S+  
Sbjct: 125 YCV-SCESYCAISKAD 139


>gi|295706762|ref|YP_003599837.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
 gi|294804421|gb|ADF41487.1| valyl-tRNA synthetase [Bacillus megaterium DSM 319]
          Length = 880

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 16/160 (10%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W++ + +   W S   W     GW    +A    Y      +   G D+IF   
Sbjct: 436 PADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFKRYYPTN--VLVTGYDIIFFWV 493

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I Q           ++ IH    + EGRKMSKS GN +   E++E        + A 
Sbjct: 494 SRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGVDPMEVIE-------KYGAD 546

Query: 306 VIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
            +R  +       P   + F+ +++       +K    S 
Sbjct: 547 SLRYFLSTGS--SPGQDLRFSFEKVEATWNFANKIWNASR 584


>gi|293397302|ref|ZP_06641574.1| leucine-tRNA ligase [Serratia odorifera DSM 4582]
 gi|291420220|gb|EFE93477.1| leucine-tRNA ligase [Serratia odorifera DSM 4582]
          Length = 860

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 62/160 (38%), Gaps = 23/160 (14%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             +     KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVYAGMSKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHD 380
             +  A   L +  + +     KG + P  +++L  D     A+ + +HK   + T +  
Sbjct: 661 SGVEGANRFLKRVWKLAFDHLEKGAVQPLDVASLNED---QKALRRDVHKTIAKVTDDIG 717

Query: 381 LLPIFN-ASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
               FN A A ++ +        ++       L+QE L+ 
Sbjct: 718 RRQTFNTAIAAVMELMNKLGRAPQDSEQD-RALLQEALLA 756


>gi|261839774|gb|ACX99539.1| methionyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 653

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137


>gi|171920754|ref|ZP_02931957.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|185179054|ref|ZP_02964793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024300|ref|ZP_02996988.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188524452|ref|ZP_03004463.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195867607|ref|ZP_03079609.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198273678|ref|ZP_03206213.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209554355|ref|YP_002284667.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225551246|ref|ZP_03772192.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|171903504|gb|EDT49793.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|184209039|gb|EDU06082.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018974|gb|EDU57014.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|195659607|gb|EDX52987.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|195660664|gb|EDX53919.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|198249706|gb|EDY74487.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|209541856|gb|ACI60085.1| valyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|225379061|gb|EEH01426.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 874

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 23/145 (15%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
                ++ IH    + +G+KMSKS GN I   +++         +    +RL        
Sbjct: 504 KRPFKDVLIHGLIRDAQGKKMSKSLGNGIDPFDIIN-------EYGLDTMRLFFAS---- 552

Query: 318 EP-----IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS-ALYN-----DLNTVSAIQ 366
                  ++F+ +RL      L+K    +     +D    S ++ +     D+N    I 
Sbjct: 553 STTVGEDLNFSTERLGANWNYLNKIWNIAKYIENLDEINESFSIQDVHEFCDVNKWI-IA 611

Query: 367 ALHKLARESTKNHDLLPIFNASAHI 391
            L KL+ E  KN D   +  A+  +
Sbjct: 612 ELSKLSVEMNKNMDKYNLVVATKDL 636


>gi|78067237|ref|YP_370006.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
 gi|123728935|sp|Q39DV4|SYM_BURS3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|77967982|gb|ABB09362.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
          Length = 720

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|30248639|ref|NP_840709.1| methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|68566001|sp|Q82WP0|SYM_NITEU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|30180234|emb|CAD84536.1| Methionyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
          Length = 706

 Score = 40.6 bits (94), Expect = 0.58,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     T  I+ H GFL + G KMSKS G FIT    LE
Sbjct: 295 HFIGKDILYFHALFWPAMLENAGYRTPT-QIFAH-GFLTVNGEKMSKSRGTFITAESYLE 352

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
                 +      +R       Y   ++ +++ + 
Sbjct: 353 ------QGLNPEWLRYY-----YAAKLNGSMEDID 376


>gi|289422845|ref|ZP_06424678.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156755|gb|EFD05387.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 647

 Score = 40.6 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/143 (16%), Positives = 43/143 (30%), Gaps = 16/143 (11%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
                YV  P  Y     HIG+A   I  D + R  R+   +  V ++    +  +KI +
Sbjct: 3   KKPTFYVTTPIYYPSGKLHIGHAYTTIAADAIARFKRFCGYD--VRFLTGTDEHGEKIQK 60

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQN 138
           +A++         +             K   +L         R T+   H   +  +   
Sbjct: 61  KAQE------AGMSEIEFLDAQIADIKKLWEKLEISNDDF-IRTTDKERHEVIIQKIFTK 113

Query: 139 IILHGHAYEA--NNEIIFDTSSI 159
           +   G  Y+            S 
Sbjct: 114 LYEQGDIYKGSYEGNYCVPCESF 136


>gi|21282174|ref|NP_645262.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49485354|ref|YP_042575.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297207407|ref|ZP_06923846.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300910366|ref|ZP_07127819.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|25009356|sp|Q8NY00|SYM_STAAW RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|60390700|sp|Q6GBZ8|SYM_STAAS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21203610|dbj|BAB94310.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49243797|emb|CAG42222.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296887970|gb|EFH26864.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300888355|gb|EFK83542.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 657

 Score = 40.6 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|312134269|ref|YP_004001607.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
 gi|311774320|gb|ADQ03807.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
          Length = 653

 Score = 40.6 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 59/198 (29%), Gaps = 55/198 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A                 +G+L LEG KMSKS GN +     
Sbjct: 255 DVHLVGKEIVRFHTIIWPAMLMAL--GLPLPKTVFGHGWLLLEGGKMSKSKGNVV----- 307

Query: 292 LETKKFGGRSWPAPVIRLAML------MTHYREPIDFTVQRLTE---------------- 329
                   + +    +R  +L         Y     F+ + L                  
Sbjct: 308 --DPVILAQKYGVDSLRYFLLREIPFGADGY-----FSEEALKNRHNSDLANDLGNLLSR 360

Query: 330 AEILLSKWPQ----TSTSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARES 375
              ++ K+          K  ID  + S           L ++    +A+  + KL   +
Sbjct: 361 TVAMIEKYFDGVIYLPEEKEEIDNELSSLAKEVYENVCKLLDEFQFSNALIEIWKLISRA 420

Query: 376 TKNHDLLPIFNASAHILG 393
            K  D          +LG
Sbjct: 421 NKYID-----QTMPWVLG 433


>gi|301769279|ref|XP_002920059.1| PREDICTED: LOW QUALITY PROTEIN: isoleucyl-tRNA synthetase,
           mitochondrial-like [Ailuropoda melanoleuca]
          Length = 1059

 Score = 40.6 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S    +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 686 SVATRKKAPFKTVVVHGFTLGEKGEKMSKSLGNVIDPDVVINGGQDQNKEPPYGADVLRW 745

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +  +   L  A   +SK   T
Sbjct: 746 WVAESNVFTEVTVSPSVLNAARDDISKLRNT 776


>gi|294501414|ref|YP_003565114.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
 gi|294351351|gb|ADE71680.1| valyl-tRNA synthetase [Bacillus megaterium QM B1551]
          Length = 880

 Score = 40.6 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 16/160 (10%)

Query: 188 PADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
           PAD   W++ + +   W S   W     GW    +A    Y      +   G D+IF   
Sbjct: 436 PADIENWEQDSDVLDTWFSSALWPFSTMGWPDVDAADFKRYYPTN--VLVTGYDIIFFWV 493

Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
              I Q           ++ IH    + EGRKMSKS GN +   E++E        + A 
Sbjct: 494 SRMIFQGLEFTGKRPFDDVLIHGLVRDAEGRKMSKSLGNGVDPMEVIE-------KYGAD 546

Query: 306 VIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
            +R  +       P   + F+ +++       +K    S 
Sbjct: 547 SLRYFLSTGS--SPGQDLRFSFEKVEATWNFANKIWNASR 584


>gi|282164299|ref|YP_003356684.1| glutamyl-tRNA synthetase [Methanocella paludicola SANAE]
 gi|282156613|dbj|BAI61701.1| glutamyl-tRNA synthetase [Methanocella paludicola SANAE]
          Length = 570

 Score = 40.6 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 40/128 (31%), Gaps = 29/128 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P       +GNAR +I   V Y   R Y G   + +     D  D  I+R   E     +
Sbjct: 112 PNPNGPPSLGNARGII---VNYEYARMYDGVFIMRF-----DDTDPSIKRPMLEAYQWYV 163

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
           + A                  L C  P     A++ IP      + +I  G AY      
Sbjct: 164 DQAKW----------------LGC-PPDKVVIASDRIPLYYEYAEKLIDMGKAYV----C 202

Query: 153 IFDTSSIP 160
             D  S  
Sbjct: 203 FCDHDSFK 210


>gi|170723720|ref|YP_001751408.1| isoleucyl-tRNA synthetase [Pseudomonas putida W619]
 gi|254782428|sp|B1JF83|SYI_PSEPW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|169761723|gb|ACA75039.1| isoleucyl-tRNA synthetase [Pseudomonas putida W619]
          Length = 943

 Score = 40.6 bits (94), Expect = 0.59,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 47/124 (37%), Gaps = 17/124 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++  T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDESGRKMSKSLGNTIEPEKVNNTLG-------ADILRLWVS 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQAL 368
            T Y   +  + Q L  +     +   T+    ++    DPA       DL     + AL
Sbjct: 637 ATDYSGEMAVSEQILQRSADAYRRIRNTARFLLSNLSGFDPAR------DLLAPEDMLAL 690

Query: 369 HKLA 372
            + A
Sbjct: 691 DRWA 694


>gi|323438722|gb|EGA96462.1| methionyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442066|gb|EGA99701.1| methionyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 657

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|310643589|ref|YP_003948347.1| valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
 gi|309248539|gb|ADO58106.1| Valyl-tRNA synthetase-like protein [Paenibacillus polymyxa SC2]
          Length = 888

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 60/139 (43%), Gaps = 14/139 (10%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YRE 318
              ++ +H    + +GRKMSKS GN +   +++E        +    +R  +  +    +
Sbjct: 516 PFKDVLMHGLVRDADGRKMSKSLGNGVDPLDVIE-------QYGTDAMRYMISTSSTPGQ 568

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTVS--AIQALHKLAR 373
            + F  +R+ +A    +K    S    +    V +A  +   DL+TV    +  L++ +R
Sbjct: 569 DLRFRWERVEQARNFANKIWNASRFALMNLEGVTAADIDITGDLSTVDRWILHRLNETSR 628

Query: 374 ESTKNHDLLPIFNASAHIL 392
           + T+  D    F  +  +L
Sbjct: 629 DITRLIDAYE-FGETGRLL 646


>gi|307718175|ref|YP_003873707.1| hypothetical protein STHERM_c04620 [Spirochaeta thermophila DSM
          6192]
 gi|306531900|gb|ADN01434.1| hypothetical protein STHERM_c04620 [Spirochaeta thermophila DSM
          6192]
          Length = 530

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
          YVC  G T     HIGN R +I  +++ R LR    +    Y  +  D+
Sbjct: 30 YVCASGITPSGTVHIGNFREIISVELVVRALRDLGKDVRFIYSWDEYDV 78


>gi|284009232|emb|CBA76326.1| leucyl-tRNA synthetase [Arsenophonus nasoniae]
          Length = 871

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 16/146 (10%)

Query: 14  KITEFQAIDPSNIRMYVCG---PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F+ I+ +N   Y C    P      H+G+ R   + DV+ R  R           +
Sbjct: 31  EKQTFKVIEDNNKEKYYCLSMLPYPSGQLHMGHVRNYTIGDVISRYQRMLG--------K 82

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           N+             E  ++  N A +  T  N +        L           T   P
Sbjct: 83  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIEYMKNQLKMLGFGY-DWSREVTTCTP 141

Query: 131 QMIYLIQ----NIILHGHAYEANNEI 152
           +     Q     +   G  Y+  + +
Sbjct: 142 EYYRWEQWFFTKLYEKGLVYKKTSAV 167


>gi|284044283|ref|YP_003394623.1| leucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
 gi|283948504|gb|ADB51248.1| leucyl-tRNA synthetase [Conexibacter woesei DSM 14684]
          Length = 819

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 62/186 (33%), Gaps = 42/186 (22%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H           A        E    ++   G +  +G KMSKS G
Sbjct: 531 PVDQYIGGVEHAILHLLYARFFTKAFADMGLLGSDEPFQALFT-QGMITRDGAKMSKSKG 589

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N I+ +  ++        + A   R   + +    +  D++ + +      L++  +   
Sbjct: 590 NVISPSTYVDR-------YGADTARCYILFIGPPDQDADWSDEGVEGVHRFLARLWRLGD 642

Query: 343 SKGI------------IDPAV-------LSALYND------LNTVSAIQALHKLARESTK 377
             G              D AV       +  + ND       NT  AI A+ +L  E  +
Sbjct: 643 ELGAGSCDSPAAGSLSADVAVARKAHWAIEKVTNDVSGRFAFNT--AISAVMELVNECYR 700

Query: 378 NHDLLP 383
           + +   
Sbjct: 701 HRESAS 706


>gi|282915808|ref|ZP_06323576.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283768925|ref|ZP_06341834.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|282320299|gb|EFB50641.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|283461106|gb|EFC08192.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 657

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|259047289|ref|ZP_05737690.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036065|gb|EEW37320.1| valine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 880

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 8/93 (8%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q           N+ IH    + +GRKMSKS GN +   E++E        + A  +R  
Sbjct: 498 QGLEFTGKRPFKNVLIHGLIRDSQGRKMSKSLGNGVDPMEVIE-------QYGADALRWF 550

Query: 311 MLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
           +       + + ++  ++  A   ++K    S 
Sbjct: 551 LANGSAPGQDVRYSTDKMDAAWNFINKIWNASR 583


>gi|255322301|ref|ZP_05363447.1| valyl-tRNA synthetase [Campylobacter showae RM3277]
 gi|255300674|gb|EET79945.1| valyl-tRNA synthetase [Campylobacter showae RM3277]
          Length = 875

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 52/153 (33%), Gaps = 27/153 (17%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           Q   A       +I++H    + +GRKMSKS GN I               + A ++R  
Sbjct: 507 QGENALGKLPFDDIYLHALVKDEQGRKMSKSLGNVI-------DPLVSIEEYSADILRFT 559

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA---- 364
            A+L    R  I  + +++       +K    S    + +           N   A    
Sbjct: 560 LALLAVQGR-DIKLSDEKMKLVRNFTNKLYNASKYLLLNESKFA-------NLSDAKIET 611

Query: 365 ------IQALHKLARESTKNHDLLPIFNASAHI 391
                 +   ++  RE  +N D     +A+  I
Sbjct: 612 KLGKYMLSRFNECVREVRENIDAYRFNDAANAI 644


>gi|240116915|ref|ZP_04730977.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 700

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 70/196 (35%), Gaps = 25/196 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 314 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 371

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 372 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 424

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLPIFNASAHILGIEVCKEHL 401
                  L +    VS    L KLA ES       +N +          +  I       
Sbjct: 425 AKRFEGRLKD----VSGSALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDA 480

Query: 402 NKNISIAIEKLVQERL 417
           NK   +A ++   ERL
Sbjct: 481 NKPWELAKQEGQDERL 496


>gi|229543463|ref|ZP_04432523.1| leucyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229327883|gb|EEN93558.1| leucyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 804

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +++LE+         A  +RL  M M   
Sbjct: 557 KEPFQRLFNQGMILGANHEKMSKSRGNVVNPDDILESHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  +   L + W       G +   +  
Sbjct: 610 DASIPWSTNGLDGSRRFLDRIWRLFVNEDGSLSEKIQD 647


>gi|195117288|ref|XP_002003181.1| GI17774 [Drosophila mojavensis]
 gi|193913756|gb|EDW12623.1| GI17774 [Drosophila mojavensis]
          Length = 1184

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     +   K       NG L L   KMSKS+GNF
Sbjct: 669 PMDLRVSGKDLIQNHLTFCLYNHAAIW--PNDETKWPKGMRVNGHLLLNSAKMSKSDGNF 726

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E +       + + A  +RL +
Sbjct: 727 LTLYEAV-------QKFSADGMRLCL 745


>gi|196045992|ref|ZP_03113220.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196023047|gb|EDX61726.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 1033

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKAPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|113953240|ref|YP_729567.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
 gi|123031893|sp|Q0IDA5|SYI_SYNS3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|113880591|gb|ABI45549.1| isoleucyl-tRNA synthetase [Synechococcus sp. CC9311]
          Length = 968

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    ++E  K   +   + A V+RL
Sbjct: 600 SVAVNGTAPYRTVLTHGFALDEKGRKMSKSLGNVVDPMVIIEGGKNQKQEPAYGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 660 WVSSVDYSADVPIGAGILRQLSDVYRKVRNTSR 692


>gi|28493352|ref|NP_787513.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|48428542|sp|Q83GC6|SYL_TROWT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28476393|gb|AAO44482.1| leucyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 806

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 15/121 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    + I+ G + L G KMSKS G
Sbjct: 519 PVDQYCGGVEHAVLHLLYARFITKFLYDIGFVDFKEPFLRL-INQGMVVLNGAKMSKSKG 577

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++ +             VIR A++      E ID+    +T A   LS+  QT+ 
Sbjct: 578 NIVEFSKEVSQHGV-------DVIRFALIFSGPPEEDIDWKDVSMTGAARFLSRCIQTAK 630

Query: 343 S 343
            
Sbjct: 631 E 631


>gi|71027023|ref|XP_763155.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
 gi|68350108|gb|EAN30872.1| methionyl-tRNA synthetase, putative [Theileria parva]
          Length = 691

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 11/120 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              H+G+A   ++ DV+ R  R +   + V +     +   K++  A+Q+      N   
Sbjct: 110 GLPHVGHAYEAVICDVISRYYRMFG--RRVIFSTGTDEHGIKVLTTAKQQ------NKTP 161

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIF 154
             +    + +F K   RL         R T  +H+     + + +   G  Y       +
Sbjct: 162 IEVCDYYSNEFKKFYERLLVEY-DRFIRTTSESHMKAAKTIWRTVFKKGDIYLGEYNGYY 220


>gi|103486745|ref|YP_616306.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98976822|gb|ABF52973.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 527

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  DV+ R  R          VR +T  D+  ++  +          A   
Sbjct: 21  PHIGHAYEAIATDVMARFQRARGRN-----VRLVTGTDEHGLKMFQTARDQ---GRATID 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           + ++ +  F +   +L         R ++  P      Q I     A EAN ++  D
Sbjct: 73  LANEMSGYFREMYAKLNISY-DMFMRTSD--PAHHAASQAIWK---AMEANGDLYLD 123


>gi|329731069|gb|EGG67441.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 657

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|319649644|ref|ZP_08003800.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317398806|gb|EFV79488.1| isoleucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 923

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++           A ++RL +
Sbjct: 568 AVAVTGKAPYKGVLSHGFTLDGEGRKMSKSIGNVVVPAKVMNQLG-------ADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
               Y+  +  +   L +   +  K   T           L    +D N
Sbjct: 621 ASVDYQADVRVSDAILKQVAEVYRKIRNTFR--------FLLGNLDDFN 661


>gi|317014423|gb|ADU81859.1| methionyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 650

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKNQWDFFN-LDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|238785448|ref|ZP_04629433.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
 gi|238713653|gb|EEQ05680.1| Methionyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
          Length = 635

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 251 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 307

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 308 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 359

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A      ++      A   I+ + +V   ++++  
Sbjct: 360 INKRFAGKLADQLADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVANRYIDEQA 419

Query: 406 SIAIEK 411
              + K
Sbjct: 420 PWVVAK 425


>gi|153005309|ref|YP_001379634.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|152028882|gb|ABS26650.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 694

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 8/77 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++  H     A    A  +++   + +H G L + G KMSK+ G+FIT    L+
Sbjct: 298 HFIGKDILRFHAVFWPAMLWAA-GLKRPDRMPVH-GHLTVNGEKMSKTRGSFITARTYLD 355

Query: 294 TKKFGGRSWPAPVIRLA 310
                       ++R  
Sbjct: 356 A------GLDPELLRYF 366



 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 22/85 (25%), Gaps = 8/85 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+    I  DV  R  R       VTYV         I   A +             
Sbjct: 18  IHLGHLVEYIQTDVYVRYRRACG--DHVTYVCAADSHGTPIEVNAAK------AGMTPKA 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQP 123
              K   +   D  R      T+  
Sbjct: 70  FVEKYRGEQHDDFRRFGVEFSTYYT 94


>gi|118477612|ref|YP_894763.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|166200197|sp|A0RDG3|SYI_BACAH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|118416837|gb|ABK85256.1| Isoleucyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 1033

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKAPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|78044237|ref|YP_361414.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996352|gb|ABB15251.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 653

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 36/188 (19%), Positives = 64/188 (34%), Gaps = 50/188 (26%)

Query: 232 DIHGGGLDL-IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G D+  F  H         A  IE    + + +G+  LEG KMSKS GN +   +
Sbjct: 253 DVHLVGKDIVRF--HTVIWPIILLALGIELPKKV-VGHGWFVLEGGKMSKSKGNVVDPVK 309

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREP---ID--FTVQRL---------TEAEILLSK 336
           L+E        +    +R  ++    RE    +D  ++ + L          +   LL++
Sbjct: 310 LVE-------KYGVDAVRYFLV----REMPLGLDAVYSEEALINRINVDLANDLGNLLNR 358

Query: 337 ---------------------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
                                  +      +  PA    L +  +   A+  + +L    
Sbjct: 359 TLSMLEKFLGGEIPLPSEYEEIDREVIELALALPAETEKLMDKFDLAGALANIWRLVTRL 418

Query: 376 TKNHDLLP 383
            K  D + 
Sbjct: 419 NKYIDEVA 426



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 36/133 (27%), Gaps = 13/133 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+A   +  D + R  R    +     V  +T  D+      + E  +     + 
Sbjct: 16  DNLHIGHAYTTVAADTMARFKRMTGYD-----VWFLTGSDEH---GQKIERKAKSQGLSP 67

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NNEI 152
                     F      L         R T   H   +  + Q +   G  Y++      
Sbjct: 68  KEYVDPIVDSFKHLWKLLDISYDDF-IRTTEERHKKVVQAIFQKLYDQGDIYKSAYEGWY 126

Query: 153 IFDTSSIPNYGSF 165
                +    G  
Sbjct: 127 CTPCEAFWTEGKL 139


>gi|82750197|ref|YP_415938.1| methionyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|82655728|emb|CAI80127.1| ethionyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 657

 Score = 40.6 bits (94), Expect = 0.60,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|331002328|ref|ZP_08325846.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330410144|gb|EGG89578.1| valyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 880

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 48/228 (21%), Positives = 82/228 (35%), Gaps = 42/228 (18%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              + IH    + EGRKMSKS GN I   E+
Sbjct: 480 DVLVTGYDIIFFWVVRMVFSGYEQTGKTPFHTVLIHGLVRDSEGRKMSKSLGNGIDPLEV 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST----SK 344
           ++        + A  +R+ ++  +   P   + F  +R+  A    +K    +     + 
Sbjct: 540 ID-------KYGADALRMMLMTGN--APGNDMRFYYERVESARNFANKIWNAARLIMMNI 590

Query: 345 GIIDPAVLSA---LYNDLNTVSAI-QALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           G   P  + +   + +D      I    ++L +E T N D   +  A A I         
Sbjct: 591 GESKPEAIDSSKLMISD----KWILSKSNRLVKEVTTNLDKYELGIALAKI-----YDFA 641

Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES-----KGFILE 443
             +     IE +V+ RL       ++  D  R    S        IL+
Sbjct: 642 WEEFCDWYIE-MVKVRL-------WNKEDESRDTALSVLTYVLNIILK 681


>gi|315185373|gb|EFU19146.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 530

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 2/49 (4%)

Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
          YVC  G T     HIGN R +I  +++ R LR    +    Y  +  D+
Sbjct: 30 YVCASGITPSGTVHIGNFREIISVELVVRALRDLGKDVRFIYSWDEYDV 78


>gi|206560985|ref|YP_002231750.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
 gi|226710898|sp|B4E8E0|SYM_BURCJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|198037027|emb|CAR52948.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
          Length = 718

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|197336022|ref|YP_002156576.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
 gi|226710937|sp|B5FG53|SYM_VIBFM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|197317512|gb|ACH66959.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
          Length = 686

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 30/174 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAGTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
           S + G I       L ++             A    + ++      A   I  +
Sbjct: 394 SRNAGFITKRFDGKLADNFAEPELYNEFIAAADRIAELYETREFGRAIREITAL 447


>gi|171320877|ref|ZP_02909876.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
 gi|171093862|gb|EDT38994.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
          Length = 723

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|228993197|ref|ZP_04153118.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
 gi|228999247|ref|ZP_04158827.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228760444|gb|EEM09410.1| Valyl-tRNA synthetase [Bacillus mycoides Rock3-17]
 gi|228766523|gb|EEM15165.1| Valyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
          Length = 881

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +     Y     D    G D+I
Sbjct: 433 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAEDFKRY--YSTDALVTGYDII 490

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   ++++        
Sbjct: 491 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVID-------K 543

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 544 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 593


>gi|254361090|ref|ZP_04977235.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153092576|gb|EDN73631.1| leucine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 861

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSK---WPQTSTSKGIIDPAVLSALYND----------------------- 358
             +  A+  L +      +           ++AL  D                       
Sbjct: 661 SGVEGAKRFLGRVWNLVYSYAQNPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKAPLETEQDKAVMA 751


>gi|57651372|ref|YP_185421.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|88194248|ref|YP_499040.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151220665|ref|YP_001331487.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|221142318|ref|ZP_03566811.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|258452829|ref|ZP_05700824.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|262049975|ref|ZP_06022834.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|282925564|ref|ZP_06333217.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|284023499|ref|ZP_06377897.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|304380506|ref|ZP_07363183.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81695187|sp|Q5HII6|SYM_STAAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57285558|gb|AAW37652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87201806|gb|ABD29616.1| methionyl-tRNA synthetase, putative [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|150373465|dbj|BAF66725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|257859515|gb|EEV82368.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|259161910|gb|EEW46493.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|269940061|emb|CBI48437.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282592468|gb|EFB97480.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|302750380|gb|ADL64557.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340951|gb|EFM06874.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320139424|gb|EFW31302.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|329313208|gb|AEB87621.1| Methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329729770|gb|EGG66167.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 657

 Score = 40.6 bits (94), Expect = 0.61,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|308450410|ref|XP_003088289.1| hypothetical protein CRE_07173 [Caenorhabditis remanei]
 gi|308248160|gb|EFO92112.1| hypothetical protein CRE_07173 [Caenorhabditis remanei]
          Length = 510

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S    +      +  H   ++ +GRK+SKS GNFI + +++       +   A  +RL +
Sbjct: 153 SIAIHKRAPYKALLTHGFTVDEKGRKLSKSLGNFIPLEDII-------KQLGADGLRLYV 205

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 206 ASSDYRYEIAASNEIFSRVSDSYRRIRNT 234


>gi|258448031|ref|ZP_05696161.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257858721|gb|EEV81594.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|297583961|ref|YP_003699741.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
 gi|297142418|gb|ADH99175.1| isoleucyl-tRNA synthetase [Bacillus selenitireducens MLS10]
          Length = 920

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 13/135 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EG+KMSKS GN +    ++       +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFTLDGEGKKMSKSLGNTVIPANVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AI 365
               Y+  +  +   L +   +  K   T      +     P+  +  ++DL  +    +
Sbjct: 622 ASVDYQADVRVSDAILKQVAEVYRKIRNTFRFLLGNLDGFVPSEHAVSFDDLGELDQYMM 681

Query: 366 QALHKLARESTKNHD 380
             L+ L   + K +D
Sbjct: 682 LKLNDLITSTRKAYD 696


>gi|154151808|ref|YP_001405426.1| isoleucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|166229748|sp|A7IAM2|SYI_METB6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|154000360|gb|ABS56783.1| isoleucyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 1076

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 33/80 (41%), Gaps = 12/80 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       ++ +H   L+ EGRKMSKS GN +   E++             V+RL +
Sbjct: 566 STIAFGKAPYKSVCMHGFALDAEGRKMSKSLGNVVAPEEVIAKVGV-------DVLRLYV 618

Query: 312 LMTHYREPID---FTVQRLT 328
           L +    P D   F    + 
Sbjct: 619 LSSS--APWDDLKFNWDGIA 636


>gi|85000239|ref|XP_954838.1| methionyl-tRNA synthetase [Theileria annulata strain Ankara]
 gi|65302984|emb|CAI75362.1| methionyl-tRNA synthetase, putative [Theileria annulata]
          Length = 884

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 44/120 (36%), Gaps = 11/120 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              H+G+A   +V DV+ R  R +   + V +     +   K++  A+Q+      N   
Sbjct: 305 GLPHVGHAYEAVVCDVISRYYRMFG--RRVIFSTGTDEHGIKVLTTAKQQ------NKTP 356

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIF 154
             + +  + +F K   RL         R T  +H+     + + +   G  Y       +
Sbjct: 357 IEVCNYYSNEFKKFYKRLLVEY-DRFIRTTSESHMKAAKTIWRTVFKKGDIYLGEYNGYY 415


>gi|134298948|ref|YP_001112444.1| DNA repair protein RecN [Desulfotomaculum reducens MI-1]
 gi|134051648|gb|ABO49619.1| DNA replication and repair protein RecN [Desulfotomaculum reducens
           MI-1]
          Length = 565

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 67/181 (37%), Gaps = 30/181 (16%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
            ++++ + N +++ E L+T  +        +       + YR+ +++  +RL + E  L+
Sbjct: 260 EELAEIDNNLVSLIEALKTALYQLEDVAREI-------SSYRDQVEYNPERLDQIENRLN 312

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
              Q     G     +L     D    + +  + KL+  S +  DL           G+E
Sbjct: 313 LIKQLKYKYGSSIKEIL-----DYKEATLL-EIDKLSNSSQQADDLKESIK------GLE 360

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
             K+ + +      + L + R      K+    D  R +L+       D+K   N +   
Sbjct: 361 --KQWIQQA-----KDLTELRQ--RAAKQLEE-DVAR-ELKYLEIGAMDFKVGMNPKTGV 409

Query: 456 R 456
            
Sbjct: 410 S 410


>gi|330723478|gb|AEC45848.1| isoleucyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
          Length = 694

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD++  G D       + +  S           +  H   ++  G KMSKS GN ++  
Sbjct: 545 PFDLYLEGSDQYRGWFNSSLINSYIYYNKAPYRRLLSHGFIVDQNGNKMSKSKGNGVSPL 604

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +L++T       + A ++RL +  + Y   + ++     +   +  K   T
Sbjct: 605 DLIKT-------YGADILRLWVSNSEYFNDVVYSKDIFEQNVEIYRKIRNT 648


>gi|317492497|ref|ZP_07950925.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316919489|gb|EFV40820.1| methionyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 684

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 72/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  +  +N+++H G++ + G KMSKS G F+     L+
Sbjct: 296 HFIGKDIVYFHSLFWPAMLEGSNFRKP-SNVFVH-GYVTVNGAKMSKSRGTFVQARTYLD 353

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                        +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 354 -------HLDPDCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 404

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L   L   +  Q     A E  + ++      A   I+ + ++   ++++  
Sbjct: 405 INKRFGGKLSEHLADPALYQTFVNAADEIAQAYENRESGKAIREIMALADLANRYVDEQA 464

Query: 406 SIAIEK 411
              + K
Sbjct: 465 PWVVAK 470


>gi|229006794|ref|ZP_04164427.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
 gi|228754416|gb|EEM03828.1| Valyl-tRNA synthetase [Bacillus mycoides Rock1-4]
          Length = 867

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 19/177 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
             + PAD   W +   +   W S   W     GW  E +     Y     D    G D+I
Sbjct: 419 GTEAPADIENWNQDNDVLDTWFSSALWPFSTLGWPNEDAEDFKRY--YSTDALVTGYDII 476

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + +GRKMSKS GN I   ++++        
Sbjct: 477 FFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDVID-------K 529

Query: 302 WPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
           + A  +R  +       + + F+++++      ++K    S         VL  + +
Sbjct: 530 YGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------FVLMNMDD 579


>gi|170703076|ref|ZP_02893899.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
 gi|170132017|gb|EDT00522.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
          Length = 720

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|187251862|ref|YP_001876344.1| methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
 gi|186972022|gb|ACC99007.1| Methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
          Length = 500

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 12/130 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V  + HIG++   +  D++ R  R    E        +T  D+  I     E  +     
Sbjct: 14  VNAYPHIGHSYTTLACDIVSRYKRSRGEEVHF-----LTGTDEHGI---NIEKAAEKAGM 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      +    + +    L         R T+  H   +  + + +I  G  Y  +   
Sbjct: 66  SPKAWCDQVVDAYKELWKILDIKYDDF-IRTTDKRHEETVQQIFEILIAKGDIYLGHYS- 123

Query: 153 IFDTSSIPNY 162
               +S   Y
Sbjct: 124 GMYCNSCEAY 133


>gi|109947187|ref|YP_664415.1| methionyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
 gi|109714408|emb|CAJ99416.1| metS [Helicobacter acinonychis str. Sheeba]
          Length = 643

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 44/139 (31%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSAKLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T++  +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKNQWDFFN-LDYDGFIRTTDN--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|15923480|ref|NP_371014.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926167|ref|NP_373700.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|156978818|ref|YP_001441077.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253316233|ref|ZP_04839446.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253735224|ref|ZP_04869389.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|255005283|ref|ZP_05143884.2| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|258429606|ref|ZP_05688280.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|269202110|ref|YP_003281379.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895097|ref|ZP_06303317.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|296276555|ref|ZP_06859062.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|54039687|sp|P67579|SYM_STAAN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|54042047|sp|P67578|SYM_STAAM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13700380|dbj|BAB41678.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246258|dbj|BAB56652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|156720953|dbj|BAF77370.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|253726784|gb|EES95513.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257849665|gb|EEV73632.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|262074400|gb|ACY10373.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282762515|gb|EFC02655.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|28572538|ref|NP_789318.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|48428543|sp|Q83HV5|SYL_TROW8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|28410670|emb|CAD67056.1| leucyl-tRNA synthetase [Tropheryma whipplei TW08/27]
          Length = 806

 Score = 40.2 bits (93), Expect = 0.62,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 15/121 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    + I+ G + L G KMSKS G
Sbjct: 519 PVDQYCGGVEHAVLHLLYARFITKFLYDIGFVDFKEPFLRL-INQGMVVLNGAKMSKSKG 577

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++ +             VIR A++      E ID+    +T A   LS+  QT+ 
Sbjct: 578 NIVEFSKEVSQHGV-------DVIRFALIFSGPPEEDIDWKDVSMTGAARFLSRCIQTAK 630

Query: 343 S 343
            
Sbjct: 631 E 631


>gi|320546329|ref|ZP_08040648.1| isoleucine--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320449050|gb|EFW89774.1| isoleucine--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 932

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 67/181 (37%), Gaps = 20/181 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQ- 366
                   +  ++  L +      K   T      +    +P   +  Y DL +V     
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLRFLIANTTDFNPNTDAVAYEDLRSVDKYMT 682

Query: 367 ----ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQERLILLK 421
                L    R++ +++D + I+ A  + + +++   +L+    +  IE       I  +
Sbjct: 683 VKFNQLVATIRKAYEDYDFMTIYKAVVNFITVDLSAFYLDFAKDVVYIEA---ADNIARR 739

Query: 422 M 422
            
Sbjct: 740 Q 740


>gi|312086517|ref|XP_003145107.1| bifunctional aminoacyl-tRNA synthetase [Loa loa]
 gi|307759730|gb|EFO18964.1| bifunctional aminoacyl-tRNA synthetase [Loa loa]
          Length = 1016

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 53/166 (31%), Gaps = 45/166 (27%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +    L +  +  +  K +         DD    +              
Sbjct: 252 GYLHIGHAKAAL----LNQYYQQAFEGKLIMR------FDDTNPAKEN------------ 289

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
               +   Q  ++D   L    P      +++   ++ +   ++  G AY  + +     
Sbjct: 290 ----AHFEQVILEDLKMLEVK-PDRWTHTSDYFDLILEMCDRLLQEGKAYVDDTDAEL-- 342

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW---KRSTP 199
                      RK  E++  +R      ++N     LW   K++T 
Sbjct: 343 ----------MRKEREERKESRCRNNTPEQNL---ALWGEMKKATE 375


>gi|304372933|ref|YP_003856142.1| Isoleucyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
 gi|304309124|gb|ADM21604.1| Isoleucyl tRNA synthetase [Mycoplasma hyorhinis HUB-1]
          Length = 892

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD++  G D       + +  S           +  H   ++  G KMSKS GN ++  
Sbjct: 545 PFDLYLEGSDQYRGWFNSSLINSYIYYNKAPYRRLLSHGFIVDQNGNKMSKSKGNGVSPL 604

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +L++T       + A ++RL +  + Y   + ++     +   +  K   T
Sbjct: 605 DLIKT-------YGADILRLWVSNSEYFNDVVYSKDIFEQNVEIYRKIRNT 648


>gi|283469782|emb|CAQ48993.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|253730957|ref|ZP_04865122.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253725307|gb|EES94036.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|227893344|ref|ZP_04011149.1| isoleucyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
 gi|227864759|gb|EEJ72180.1| isoleucyl-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 53/149 (35%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N++++          A +IRL +
Sbjct: 571 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVIKRMG-------AEIIRLWV 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS-AIQ 366
                   +  ++  L ++     K   T      +    DP      YNDL +V   ++
Sbjct: 624 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYNDLRSVDQYVE 683

Query: 367 A-LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L ++    +D          +   
Sbjct: 684 VKLNDLVKDCLAAYDKFDFTTVFKKVFNF 712



 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 35/101 (34%), Gaps = 7/101 (6%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQ 85
           GP   +   H+G+A   I  D++ R                   +  ++ ++ ++   R+
Sbjct: 57  GPPFANGNIHMGHALNKISKDIIVRYKNMSGYYAPYVPGWDTHGLP-VEQQLAKKGVDRK 115

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
                   +       +  Q+ +KD  RL  +A    P  T
Sbjct: 116 TMDRAKYRELCRQYAEEQIQKQMKDFKRLGVMADWDHPYIT 156


>gi|217034348|ref|ZP_03439764.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
 gi|216943233|gb|EEC22700.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
          Length = 645

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137


>gi|225551876|ref|ZP_03772819.1| lysyl-tRNA synthetase [Borrelia sp. SV1]
 gi|225371671|gb|EEH01098.1| lysyl-tRNA synthetase [Borrelia sp. SV1]
          Length = 521

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 5/128 (3%)

Query: 21  IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+  K
Sbjct: 16  KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDVFRK 75

Query: 79  IIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           + +    QE  +  +  AI+ +    T+ +     +   +            P+ I   +
Sbjct: 76  VPKNMPEQELLTTYLRQAITRVPD--TRSYKTSYAKANEIEFEKYLPIVGINPEFIDQSK 133

Query: 138 NIILHGHA 145
               + +A
Sbjct: 134 QYTSNAYA 141


>gi|160872857|ref|ZP_02062989.1| methionyl-tRNA synthetase [Rickettsiella grylli]
 gi|159121656|gb|EDP46994.1| methionyl-tRNA synthetase [Rickettsiella grylli]
          Length = 553

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 67/176 (38%), Gaps = 37/176 (21%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A    A+    TA I++H G++ + G+KMSKS G FI+    L 
Sbjct: 292 HFIGKDIINFHAIFWPAILKSANFRSPTA-IFVH-GYVTVNGQKMSKSRGTFISARHYLN 349

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREP--IDFTVQRLTE----------------AEILLS 335
                        +R        R+   IDF +    +                    ++
Sbjct: 350 -------HLDPEYLRYYYATKLSRKTEDIDFNLHDFIQKINSDLIGKLVNIASRCASFIN 402

Query: 336 KWPQTSTSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARESTKNHDL 381
           K      SK +++PA++           + Y  LN   A++ + +LA ++ +  D 
Sbjct: 403 KKFAHQLSKNLLNPALMETFIRQGDEISSHYEALNYNRAMKLIMELADKANQMIDA 458


>gi|172061392|ref|YP_001809044.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
 gi|226710896|sp|B1YUT2|SYM_BURA4 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|171993909|gb|ACB64828.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
          Length = 720

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|108563402|ref|YP_627718.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
 gi|107837175|gb|ABF85044.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
          Length = 643

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137



 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 29/107 (27%)

Query: 245 HENEIAQSCCADR------IEKTANIW---------------IHNGFLNLEGRKMSKSNG 283
            +N++A   CA        +   A  W                 +G+  +EG KMSKS G
Sbjct: 248 LDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGVKMSKSLG 307

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N +   +L          +    +R  +L    + +  DF+ + L E
Sbjct: 308 NVLDAQKL-------AMEYGIEELRYFLLREVPFGQDGDFSKKALIE 347


>gi|115352535|ref|YP_774374.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
 gi|122322486|sp|Q0BCT3|SYM_BURCM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115282523|gb|ABI88040.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
          Length = 720

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|302332203|gb|ADL22396.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|298693820|gb|ADI97042.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|148266948|ref|YP_001245891.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150392994|ref|YP_001315669.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257794269|ref|ZP_05643248.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258407213|ref|ZP_05680358.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420820|ref|ZP_05683756.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258446123|ref|ZP_05694284.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258453822|ref|ZP_05701795.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|295407379|ref|ZP_06817176.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297246459|ref|ZP_06930299.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|147740017|gb|ABQ48315.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149945446|gb|ABR51382.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257788241|gb|EEV26581.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257841171|gb|EEV65620.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843212|gb|EEV67625.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257855100|gb|EEV78042.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257863993|gb|EEV86748.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|285816189|gb|ADC36676.1| Methionyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967736|gb|EFG43768.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297176646|gb|EFH35908.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315128616|gb|EFT84619.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|329725056|gb|EGG61551.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|49482717|ref|YP_039941.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424601|ref|ZP_05601029.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257429904|ref|ZP_05606290.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432607|ref|ZP_05608969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435511|ref|ZP_05611561.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903075|ref|ZP_06310967.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282904865|ref|ZP_06312725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907812|ref|ZP_06315650.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910128|ref|ZP_06317934.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913317|ref|ZP_06321108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918271|ref|ZP_06326011.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923022|ref|ZP_06330708.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957279|ref|ZP_06374737.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500366|ref|ZP_06666218.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509304|ref|ZP_06668020.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293515893|ref|ZP_06670583.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427024|ref|ZP_06819661.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297591600|ref|ZP_06950237.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|60390704|sp|Q6GJI1|SYM_STAAR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49240846|emb|CAG39513.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272628|gb|EEV04748.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257279420|gb|EEV10015.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282472|gb|EEV12605.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285148|gb|EEV15265.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314541|gb|EFB44928.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317837|gb|EFB48206.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322788|gb|EFB53108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325976|gb|EFB56282.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328288|gb|EFB58563.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331982|gb|EFB61491.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596501|gb|EFC01461.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283791203|gb|EFC30013.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290921301|gb|EFD98359.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096326|gb|EFE26586.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467849|gb|EFF10359.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295129027|gb|EFG58656.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575469|gb|EFH94186.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312436421|gb|ADQ75492.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
 gi|315193851|gb|EFU24245.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|85706318|ref|ZP_01037412.1| valyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85669091|gb|EAQ23958.1| valyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.63,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 58/149 (38%), Gaps = 13/149 (8%)

Query: 168 RKIDEQKMGTRVPEKYHKKNPADFI--LWKRSTPMEPGWESP-WGRGRPGWHIECSAMSS 224
           R     ++ + + E    ++P   +  +W+    ++  + S  W  G  GW  E +A   
Sbjct: 571 RDEALHQLASALAEYTATQDPTHLVYPVWRDPDVLDTWFSSGLWPIGTLGW-PEDTAELK 629

Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
            Y      I   G D+IF      +         +  +++++H    + +G+KMSKS GN
Sbjct: 630 RYFPTSVLI--TGFDIIFFWVARMMMMQYAVVGQKPFSHVYVHALVRDEKGKKMSKSLGN 687

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLM 313
            +   +L+         +    +R  +  
Sbjct: 688 VLDPLDLIAD-------YGTDAVRFTLTS 709


>gi|315924312|ref|ZP_07920535.1| glutamine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622383|gb|EFV02341.1| glutamine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 559

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 45/119 (37%), Gaps = 26/119 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  +   + Y++ + Y G   + +       DD   E+   E      
Sbjct: 36  PEPNGYLHIGHAKSSL---LNYKIAQQYGGTFNLRF-------DDTNPEKENME------ 79

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
                       +   +D T L      +   A+++  +M+ L + +I  G AY  + +
Sbjct: 80  ----------YVESIKEDLTWLGIEWGDNLFFASSYFKKMVELAKELIRKGLAYVDDQD 128


>gi|312828985|emb|CBX33827.1| methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
           [Staphylococcus aureus subsp. aureus ECT-R 2]
          Length = 657

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|261493583|ref|ZP_05990103.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261495421|ref|ZP_05991869.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261308926|gb|EEY10181.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310765|gb|EEY11948.1| leucine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 861

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 47/153 (30%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSK---WPQTSTSKGIIDPAVLSALYND----------------------- 358
             +  A+  L +      +           ++AL  D                       
Sbjct: 661 SGVEGAKRFLGRVWNLVYSYAQNPATTALDVNALDKDQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKAPLETEQDKAVMA 751


>gi|42523229|ref|NP_968609.1| methionyl-tRNA synthetase [Bdellovibrio bacteriovorus HD100]
 gi|68565985|sp|Q6MMA3|SYM_BDEBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|39575434|emb|CAE79602.1| metG [Bdellovibrio bacteriovorus HD100]
          Length = 687

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 48/142 (33%), Gaps = 22/142 (15%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM---LMTHYREP 319
            +++H G L + G KMSKS G FI     L              +R      L +   + 
Sbjct: 316 QVFVH-GHLMVNGEKMSKSKGTFIAARTYLN-------HLNPEYLRYYYSTKLSSSV-DD 366

Query: 320 IDFTVQRLTEAEI--LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA-----IQALHKLA 372
           ID  ++  T      L+ K     +  G     +   +   ++   A     I+   K A
Sbjct: 367 IDLNLEDFTNRVNSELVGKITNLGSRGG---QMLKKKMDGKMSVPDAEGKKLIEHAQKTA 423

Query: 373 RESTKNHDLLPIFNASAHILGI 394
                +++      A   I G+
Sbjct: 424 ESIAAHYEARDFAKALGEIRGL 445


>gi|71992781|ref|NP_740948.2| hypothetical protein Y105E8A.20 [Caenorhabditis elegans]
 gi|31442025|emb|CAD21672.2| C. elegans protein Y105E8A.20a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 406

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 11/72 (15%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +     ++IH  +L ++  KMSKS GN +  +E +         + A  +R  +L  
Sbjct: 172 AAGLSLPQKVFIHGHWL-IDNVKMSKSLGNVVNPSEAIT-------KFTAEGLRYFLLKH 223

Query: 315 ---HYREPIDFT 323
               Y    ++ 
Sbjct: 224 GNPSYDCSFNWN 235


>gi|309390254|gb|ADO78134.1| methionyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 653

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/159 (15%), Positives = 49/159 (30%), Gaps = 20/159 (12%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           YV  P  Y  D  HIG+A   +  D + R  +    +        +T  D+      + E
Sbjct: 7   YVTTPIYYPSDKLHIGHAYTTVAADTIARYKKMRGFDTMF-----LTGSDEH---GQKIE 58

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGH 144
             +            +    F     +L      +  R T   H   +  + + +   G 
Sbjct: 59  RKAQAAGKEAKEYVDQIVATFKNLWDKLDIEY-DYFIRTTEARHEKVVQQIFEKLYDQGD 117

Query: 145 AYEA--NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
            Y+            +      ++ R+++E K     P+
Sbjct: 118 IYKGKYEGWYCTPCEAF-----WTERQLEEAKEEKVCPD 151


>gi|268602591|ref|ZP_06136758.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268586722|gb|EEZ51398.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
          Length = 684

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 70/196 (35%), Gaps = 25/196 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 298 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 355

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 356 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 408

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLPIFNASAHILGIEVCKEHL 401
                  L +    VS    L KLA ES       +N +          +  I       
Sbjct: 409 AKRFEGRLKD----VSGSALLAKLAAESNNIAEQYENREYARALRDIMALADIVNEYVDA 464

Query: 402 NKNISIAIEKLVQERL 417
           NK   +A ++   ERL
Sbjct: 465 NKPWELAKQEGQDERL 480


>gi|253827052|ref|ZP_04869937.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253510458|gb|EES89117.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 654

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 39/139 (28%), Gaps = 13/139 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D L R  R    E     V  +T  D+      + +  +   N 
Sbjct: 18  VNDVPHIGHAYTTIIADTLARYHRIQNEE-----VWFLTGTDEH---GQKIQQSAEKNNK 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  + + +F                R T+  H   +  +   +   G  Y  E   
Sbjct: 70  NPKEYVDEISAKFKNLWDSFGISY-DAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYEG 128

Query: 151 EIIFDTSSIPNYGSFSRRK 169
                  S          K
Sbjct: 129 NYCISCESFFAKSQLINHK 147


>gi|167569200|ref|ZP_02362074.1| methionyl-tRNA synthetase [Burkholderia oklahomensis C6786]
          Length = 718

 Score = 40.2 bits (93), Expect = 0.64,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376


>gi|308177478|ref|YP_003916884.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
 gi|307744941|emb|CBT75913.1| leucine-tRNA ligase [Arthrobacter arilaitensis Re117]
          Length = 829

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 47/146 (32%), Gaps = 16/146 (10%)

Query: 14  KITEFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           ++  F+  D     R YV     Y     H+G+A    + DV+ R  R    +     V 
Sbjct: 26  ELKVFKPADDGSRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYWRLRGYD-----VM 80

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           +    D   +     E+ +I  N   +  T KN         R A  +     R     P
Sbjct: 81  HPIGWDSFGLPA---ENAAIKRNAHPAEWTYKNIDTQAASFKRYAI-SADWDRRLHTSDP 136

Query: 131 QMIYLIQ----NIILHGHAYEANNEI 152
           +     Q         G AY  ++ +
Sbjct: 137 EYYRWTQWLFNKFYDKGLAYRKDHPV 162


>gi|307244136|ref|ZP_07526254.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
 gi|306492507|gb|EFM64542.1| isoleucine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
          Length = 1040

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 10/83 (12%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ + +  L+  G+KMSKS GN I   E+ E        + A  +R
Sbjct: 569 LAVSTFVTGKSPYKNVLVTDLVLDKNGKKMSKSKGNTINPFEMFE-------KYGADALR 621

Query: 309 LAML--MTHYREPIDFTVQRLTE 329
             +L     +  P+ F    L E
Sbjct: 622 WYLLYVSPPW-TPLRFDEDGLKE 643


>gi|299143964|ref|ZP_07037044.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
 gi|298518449|gb|EFI42188.1| leucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
          Length = 803

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 21/138 (15%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L   G KMSKS GN I  ++++       R + A  +R   M +  +
Sbjct: 562 KEPYKKRTSHGMILGNNGEKMSKSRGNVINPDDII-------RDYGADTLRTYEMFIGDF 614

Query: 317 REPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSAL------YNDLNTVS 363
            +   ++   +      L +                 ++ ++  A+      Y +L   +
Sbjct: 615 EKNAPWSDNGVKGCRRFLERVWNLQSILNNGEDYSKSLESSIHKAIKKVSHDYENLKANT 674

Query: 364 AIQALHKLARESTKNHDL 381
           AI AL  L  E  +N  +
Sbjct: 675 AIAALMSLLNEFNENKSI 692


>gi|146305988|ref|YP_001186453.1| isoleucyl-tRNA synthetase [Pseudomonas mendocina ymp]
 gi|166229758|sp|A4XQV5|SYI_PSEMY RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|145574189|gb|ABP83721.1| Isoleucyl-tRNA synthetase [Pseudomonas mendocina ymp]
          Length = 943

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 57/155 (36%), Gaps = 20/155 (12%)

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVF----DIHGGGLD-LIFPHHENEIAQSCCADRIE 259
           +  +  G   WH+      SH LG       D++  G D      H + +  S   D   
Sbjct: 535 DVWFDSGTTHWHV---LRGSHGLGHTTGPRADLYLEGSDQHRGWFHSSLLTGS-AIDGHA 590

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               +  H   ++  GRKMSKS GN +   E+ ++         A ++RL +  T Y   
Sbjct: 591 PYKALLTHGFVVDENGRKMSKSLGNVVAPQEVNDSLG-------ADIMRLWVASTDYSGE 643

Query: 320 IDFTVQRLTEAEILLSKWPQTS----TSKGIIDPA 350
           +  +   L  +     +   T+     +    DPA
Sbjct: 644 MAVSKVILQRSADAYRRIRNTARFMLANLNGFDPA 678


>gi|114326669|ref|YP_743826.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
 gi|122328346|sp|Q0BW99|SYL_GRABC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114314843|gb|ABI60903.1| leucyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
          Length = 875

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 61/184 (33%), Gaps = 36/184 (19%)

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEIL 333
           G KMSKS  N +   E+          + A   R  +L        +++T      A   
Sbjct: 629 GEKMSKSKRNTVAPGEIFNR-------YGADAARWFILSDNPPERDMEWTDAGAVGAYRF 681

Query: 334 LSKWPQTSTSKGII--------DPAVLSAL----------------YNDLNTVSAIQALH 369
           + +  + + +   I        D +  +A+                    N   A+  ++
Sbjct: 682 VQRLYRLAEAVARIAKEETNRDDASSDAAMTLRRMTHRTVAAVTEALEGFNFNVAVARVY 741

Query: 370 KLARESTKNHDLLPI-FNASAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKF 425
           + A   T+           +A +  I +    +     +++  +  L+++   L+  + +
Sbjct: 742 EFANALTEAEKKAAEPGMTAARVEAITLLSRIIAPMMPHLAEEMATLIEQGPKLVAEQVW 801

Query: 426 SSAD 429
            SAD
Sbjct: 802 PSAD 805



 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 27/96 (28%), Gaps = 10/96 (10%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP     YV    P      H+G+ R   + DV+ R  R    +  V +           
Sbjct: 44  DPGARTYYVLEMFPYPSGQIHMGHVRNYTLGDVVARYKRAQGYQ--VLHPMGWDAFGLPA 101

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              AR+              T  N      +  R+ 
Sbjct: 102 ENAARERGVH------PGQWTWNNIAAMRGELQRMG 131


>gi|52424393|ref|YP_087530.1| leucyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|60390681|sp|Q65VR5|SYL_MANSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52306445|gb|AAU36945.1| LeuS protein [Mannheimia succiniciproducens MBEL55E]
          Length = 860

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 52/142 (36%), Gaps = 43/142 (30%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSKW------------------PQTSTSKGIIDPAV---LSALYND---- 358
              +  A+  L +                      S+++  +   V   ++ + +D    
Sbjct: 660 ESGVEGAKRFLGRLWNLVFEYNKNPVKTAPNPTALSSAQKALRRDVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKN 378
              NT  AI A+ +L  + T+ 
Sbjct: 720 QTFNT--AIAAIMELMNKLTRA 739


>gi|308070408|ref|YP_003872013.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
 gi|305859687|gb|ADM71475.1| Valyl-tRNA synthetase (Valine--tRNA ligase) [Paenibacillus polymyxa
           E681]
          Length = 888

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 59/139 (42%), Gaps = 14/139 (10%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YRE 318
              ++ +H    + +GRKMSKS GN +   ++++        +    +R  +  +    +
Sbjct: 516 PFKDVLMHGLVRDADGRKMSKSLGNGVDPLDVID-------QYGTDAMRYMISTSSTPGQ 568

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTVS--AIQALHKLAR 373
            + F  +R+ +A    +K    S    +    V SA  +   DL+T     +  L++ +R
Sbjct: 569 DLRFRWERVEQARNFANKIWNASRFALMNLEGVTSADIDITGDLSTADRWILHRLNETSR 628

Query: 374 ESTKNHDLLPIFNASAHIL 392
           + T+  D    F  +  +L
Sbjct: 629 DITRLIDAYE-FGETGRLL 646


>gi|297616267|ref|YP_003701426.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
 gi|297144104|gb|ADI00861.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
          Length = 646

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/122 (18%), Positives = 36/122 (29%), Gaps = 11/122 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+A   +  D + R  R    +        +T  D+      + E  +       
Sbjct: 18  DNLHIGHAYTTVAADCIARYKRMQGYDVFF-----LTGSDEH---GQKIERTARDKGMEP 69

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
                +    F      L         R T   H   +  + Q +   G  Y+A  E  +
Sbjct: 70  KAYVDRIVDGFKVLWDTLLISHNDF-IRTTEERHEKAVQTIFQKVYEKGDIYKAKYEGWY 128

Query: 155 DT 156
            T
Sbjct: 129 CT 130



 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 14/113 (12%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H          AD           +G+L LEG KMSKS GN +    L
Sbjct: 254 DVHLVGKDIVRFHTVIWPTILMAADL--PLPKQVFGHGWLMLEGGKMSKSKGNVVDPLIL 311

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           +E        +    IR  +L     + +++ +      E+L+++      + 
Sbjct: 312 VE-------KYGVDSIRYYLL-----KELNYGMDGYYSEEMLIARINSDLAND 352


>gi|255725760|ref|XP_002547809.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
 gi|240135700|gb|EER35254.1| leucyl-tRNA synthetase, mitochondrial precursor [Candida tropicalis
           MYA-3404]
          Length = 921

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 52/188 (27%), Gaps = 29/188 (15%)

Query: 9   NTLERKITEFQAIDPS---NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           N+L          D     ++ M+   P      H+G+ R   + DV+ R  R       
Sbjct: 46  NSLHPTK-HLIPSDAETFYSLSMF---PYPSGVLHLGHLRVYTISDVVARFKRLNGYN-- 99

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIIT--SKNTQQFVKDTTRLACLAPTHQP 123
           V +     D      E A  E    P       I    + T+ F+ D           + 
Sbjct: 100 VIHPMGW-DAFGLPAENAAVERNINPAEWTEMNIAKMKQQTEIFLADF--------DWER 150

Query: 124 RATNHIPQMIYLIQNI----ILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTR 178
                 P+     Q I       G AY   +EI              +  ++D      R
Sbjct: 151 EVNTSSPEYYKWTQKIFLMLFERGLAYRNYSEINWDPVDQT----VLANEQVDADGRSWR 206

Query: 179 VPEKYHKK 186
                 KK
Sbjct: 207 SGAIVEKK 214


>gi|299820707|ref|ZP_07052596.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
 gi|299817728|gb|EFI84963.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
          Length = 663

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A+++        +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKEQ------GISEQQ 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +  + F +   +L     T   R T   H   +  + + ++  G  Y    E  +  
Sbjct: 73  YVDEVAEGFQELWKKLEISN-TDFIRTTQERHKTGVQAIFERLVEQGDIYLGEYEGWYSV 131

Query: 157 S 157
           S
Sbjct: 132 S 132


>gi|37522592|ref|NP_925969.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
 gi|35213593|dbj|BAC90964.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
          Length = 516

 Score = 40.2 bits (93), Expect = 0.65,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 9/85 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+H  G D++  H     A    A        +   +GFL  +GRKM K+ GN I   
Sbjct: 260 PIDLHIVGKDILRFHAVYWPAMLMSA--GLPLPGMIFGHGFLTRDGRKMGKALGNVIDPG 317

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT 314
            L+E        + +  +R   L  
Sbjct: 318 VLVE-------QYGSDAVRYYFLKA 335


>gi|313901175|ref|ZP_07834663.1| leucine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954133|gb|EFR35813.1| leucine--tRNA ligase [Clostridium sp. HGF2]
          Length = 799

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 19/137 (13%)

Query: 258 IEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTH 315
            E    ++ H G  L     KMSKS GN +  ++++E+         A  +R   M M  
Sbjct: 556 KEPFQRLF-HQGMILGENNEKMSKSRGNVVNPDDIVESHG-------ADALRVYEMFMGP 607

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
               + ++   L  A   L +  +  T       A    L          +  H   ++ 
Sbjct: 608 LEAALPWSTTGLDGARRWLDRVWRLYTDYDKFTEANDGKLD---------KVYHATVKKV 658

Query: 376 TKNHDLLPIFNASAHIL 392
           T + + L +  A + ++
Sbjct: 659 TNDVETLNLNTAISQMM 675


>gi|217031694|ref|ZP_03437198.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
 gi|216946541|gb|EEC25141.1| hypothetical protein HPB128_155g7 [Helicobacter pylori B128]
          Length = 306

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 11/101 (10%)

Query: 18  FQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
           F+  D  +  + Y+     Y     H+G+ R   + D L R  R ++    V +      
Sbjct: 20  FEPKDDFNLPKKYILSMLPYPSGEIHMGHVRNYTIGDALARYYRLHHYN--VLHPMGFDS 77

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                   A +              T +N +   K+   L 
Sbjct: 78  FGMPAENAAIKHGIH------PKTWTYENIEAMQKEFEALG 112


>gi|255931483|ref|XP_002557298.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211581917|emb|CAP80055.1| Pc12g04280 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 969

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 34/161 (21%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DV+ R  +               D+   +   A     E+ +I      
Sbjct: 90  HMGHLRVYTISDVISRFYKMRGH-----------DVLHPMGWDAFGLPAENAAIERGIDP 138

Query: 97  SIITSKNTQQFVKDTTRLACLAPTH---QPRAT------NHIPQMIYLIQNIILHGHAYE 147
           +  T +N  +  +   +L C++      +  AT       H  ++  +   +     AY+
Sbjct: 139 AAWTQENILKMKE---QLGCISAEFDWDRELATCSPDFYEHTQRIFLM---LYQKNLAYQ 192

Query: 148 ANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           A   +              +  ++D      R   K  K N
Sbjct: 193 AEALVNYDPVDKT----VLANEQVDANGFSWRSGAKVEKLN 229


>gi|210617648|ref|ZP_03291679.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
 gi|210149195|gb|EEA80204.1| hypothetical protein CLONEX_03903 [Clostridium nexile DSM 1787]
          Length = 923

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 68/174 (39%), Gaps = 30/174 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +  +           ++IH    + +GRKMSKS GN I   E+
Sbjct: 521 DVLVTGYDIIFFWVIRMVFSAFAHTGKSPFHTVFIHGLVRDSQGRKMSKSLGNGIDPLEV 580

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           +E        + A  +R+ ++  +   P   + F  +R+       +K    S       
Sbjct: 581 IE-------QYGADALRMTLVTGN--APGNDMRFYDERVEANRNFANKVWNASR------ 625

Query: 349 PAVLSALYN------DLN--TVS---AIQALHKLARESTKNHDLLPIFNASAHI 391
             +L  + +      DL   T +    +  ++ LA++ T+N D   +  A   +
Sbjct: 626 -FILMNMEDKTITTPDLGELTPTDKWILSKVNTLAKDVTENMDKFELGIALQKV 678


>gi|183598265|ref|ZP_02959758.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
 gi|188020435|gb|EDU58475.1| hypothetical protein PROSTU_01650 [Providencia stuartii ATCC 25827]
          Length = 675

 Score = 40.2 bits (93), Expect = 0.66,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FIT    L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNLFVH-GYVTVNGAKMSKSRGTFITARSYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                     A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 349 -------HLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L +++   +  Q     A+     +       A   I+ + ++   ++++  
Sbjct: 400 IAKRFGGKLSDNIADPALYQQFIDAAQIIGDAYTSREYGKAVREIMALADLANRYVDEKA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|257460335|ref|ZP_05625436.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
 gi|257441666|gb|EEV16808.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
          Length = 665

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D + R  R    E    + +  TD   + IE A  +H       
Sbjct: 12  VNDVPHIGHAYTTIIADTMARFYRLQGHE---VFFKTGTDEHGQKIEEAAAKHAQ----- 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +        + +F                R T+  H   +  + + +   G  Y+   E 
Sbjct: 64  SPKQYADGVSAKFKDLWDEFDISY-DMFSRTTDAAHEAAVQNVFRKMYEKGDIYKGEYEG 122

Query: 153 IFDTS 157
            +  S
Sbjct: 123 NYCVS 127


>gi|154687153|ref|YP_001422314.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|166230608|sp|A7Z7V7|SYL_BACA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|154353004|gb|ABS75083.1| LeuS [Bacillus amyloliquefaciens FZB42]
          Length = 804

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDEIVASHG-------ADTLRLYEMFMGPLDASIAWSESGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLS 353
              G +   V  
Sbjct: 636 EENGELTGKVTE 647


>gi|110677466|ref|YP_680473.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
 gi|123066032|sp|Q16E06|SYL_ROSDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|109453582|gb|ABG29787.1| leucyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
          Length = 848

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 41/149 (27%), Gaps = 14/149 (9%)

Query: 13  RKITEFQAID-PSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           R+   F+AI      + YV    P      H+G+ R   + DV+ R          V + 
Sbjct: 18  RENEVFKAIRSADKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARY--KLATGHNVLHP 75

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--- 126
                        A                T  N +        L       +  AT   
Sbjct: 76  MGWDAFGMPAENAAMAIGGH------PKDWTYGNIKDMRDQMKPLGLSIDWSREFATCDP 129

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            +  Q   L  + +  G  Y  N  + +D
Sbjct: 130 EYYGQQQALFLDFLEAGLVYRKNAIVNWD 158


>gi|229105097|ref|ZP_04235748.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
 gi|228678278|gb|EEL32504.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-28]
          Length = 867

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 49/127 (38%), Gaps = 15/127 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      I Q           ++ IH    + +GRKMSKS GN I   ++
Sbjct: 467 DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMDV 526

Query: 292 LETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +E        + A  +R  +       + + F+++++      ++K    S         
Sbjct: 527 IE-------KYGADAMRYFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------F 572

Query: 351 VLSALYN 357
           VL  + +
Sbjct: 573 VLMNMDD 579


>gi|224112799|ref|XP_002316296.1| predicted protein [Populus trichocarpa]
 gi|222865336|gb|EEF02467.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 43/182 (23%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++  H     A    A  ++    ++ H GFL  +G KM KS GN +  NEL+ 
Sbjct: 324 HLIGKDILRFHAVYWPAMLMSA-GVDLPKKVFGH-GFLTKDGMKMGKSLGNTLEPNELV- 380

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYR-----EPIDFTVQR----------------LTEAEI 332
                  ++ +  +R   L    R        D++ +R                L     
Sbjct: 381 ------HNFGSDAVRYFFL----REVEFGSDGDYSEERFINIVNAHLANTIGNLLNRTLG 430

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           LL K  Q++ +      A  +AL +          + KL  ++  +++ L + +A   +L
Sbjct: 431 LLKKNCQSTLAVDSAVAAEGNALKD---------TIEKLVEKARIHYENLSLSSACEAVL 481

Query: 393 GI 394
            I
Sbjct: 482 EI 483



 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 14/170 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  D + R  R     K V +V   TD         +    +     
Sbjct: 79  VNAPPHMGSAYTTIAADAIARFQRLLG--KKVIFVTG-TD-----EHGEKIAASAAAAGS 130

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
             S      +Q +      L         R T+  H   +      ++  G  Y A+ E 
Sbjct: 131 TPSEHCDVISQAYKTLWKDLEITY-DKFIRTTDPKHEGIVKEFYSRVLAKGDIYRADYEG 189

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME 201
           ++  +    Y    +  +D +   T +      K++   F L K    +E
Sbjct: 190 LYCVN-CEEY-KDEKELLDNKCCPTHLKPCIERKEDNYFFALSKYQKQLE 237


>gi|198463038|ref|XP_001352664.2| GA20381 [Drosophila pseudoobscura pseudoobscura]
 gi|198151087|gb|EAL30162.2| GA20381 [Drosophila pseudoobscura pseudoobscura]
          Length = 871

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 48/165 (29%), Gaps = 30/165 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R           +N+             E+ +   
Sbjct: 71  PYPSGNLHMGHVRVYTISDAVARFQRMCG--------KNVFQPIGWDSFGLPAENAANQR 122

Query: 93  NDAISIITSKNTQQFVKDTTRLACL----------APTHQPRATNHIPQMIYLIQNIILH 142
               +  T +N  Q  +   RL C           +P +  R T H+  M      +   
Sbjct: 123 GVEPAAWTQQNIAQMKQQLQRLGCSFDWTHELSTCSPQYY-RWTQHLFLM------LHKR 175

Query: 143 GHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           G AY+    +              +  ++D      R   K  KK
Sbjct: 176 GLAYQNEALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|51891504|ref|YP_074195.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
 gi|81826240|sp|Q67SJ2|SYV_SYMTH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51855193|dbj|BAD39351.1| valyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
          Length = 911

 Score = 40.2 bits (93), Expect = 0.67,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D++F      I  S           + +H    + +GRKMSKS GN +   ++
Sbjct: 488 DVLVTGYDILFFWVARMIFSSLELTGKIPFHTVVLHGLVRDAQGRKMSKSLGNGVDPIDV 547

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           ++        +    +R  ++      P   I F  +R+  A    +K    S 
Sbjct: 548 ID-------QYGTDALRFMLVTGS--SPGNDIRFHTERVENARNFANKLWNASR 592


>gi|308174705|ref|YP_003921410.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307607569|emb|CBI43940.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328554634|gb|AEB25126.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328913042|gb|AEB64638.1| leucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 804

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 41/132 (31%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++ +         A  +RL  M M      I ++   L  A   L + W    
Sbjct: 583 NVVNPDEIVASHG-------ADTLRLYEMFMGPLDASIAWSESGLDGARRFLDRVWRLFI 635

Query: 342 TSKGIIDPAVLS 353
              G +   V  
Sbjct: 636 EENGELTGKVTE 647


>gi|299133888|ref|ZP_07027082.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
 gi|298591724|gb|EFI51925.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
          Length = 523

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     K V ++    +   K+I+ A++E      N 
Sbjct: 21  PNGAPHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGLKMIQTAQKE------NM 72

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               + ++N  +F +   RL   +     R +   H      + + +   G  Y  +   
Sbjct: 73  TPHELATRNAGRFKEMDQRLNI-SFDRFIRTSEPAHHASTQEIWRRMAASGDIYLDSYAG 131

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 132 WYSVRDEAYY 141



 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 30/81 (37%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  I     ++ H GFL   G KMSKS GN +     
Sbjct: 263 DVHIIGKDIIRFHAVYWPAFLMAA-GIPVPKRVYAH-GFLFNRGEKMSKSVGNVV----- 315

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                     +    +R   L
Sbjct: 316 --DPFVLADQYGVDQMRYFFL 334


>gi|258544639|ref|ZP_05704873.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
 gi|258520120|gb|EEV88979.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
          Length = 40

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 7/43 (16%)

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
           E  +  R+          AD IR +L ++G I++D       +
Sbjct: 3   EADILARINAR-------ADTIRAELAAQGIIIKDTAGGVEWR 38


>gi|253687680|ref|YP_003016870.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511560|sp|C6DCI4|SYM_PECCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|251754258|gb|ACT12334.1| methionyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 676

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L      +     A    + +       A   I+ + ++   ++++  
Sbjct: 400 INKRFDGKLADTLADAELYKTFTDAAASIAEAYSSRESGRAIREIMALADIANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|238650890|ref|YP_002916746.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511551|sp|C4K297|SYL_RICPU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238624988|gb|ACR47694.1| leucyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 835

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  +  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNEFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             IRL +L  +   + ++++   +      ++K      +        + +L +D+N   
Sbjct: 623 DAIRLFVLSDSPPEKDLEWSASGIEGCSRFINKLEYMFKA--------IDSLKDDVN-SE 673

Query: 364 AIQALHKLARESTK 377
             + L++L   + K
Sbjct: 674 VNKELNRLVHFTIK 687


>gi|218248716|ref|YP_002374087.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|257061779|ref|YP_003139667.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
 gi|218169194|gb|ACK67931.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
 gi|256591945|gb|ACV02832.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
          Length = 535

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H     A    A        I+ H GFL  +G+KMSKS GN +   
Sbjct: 262 PINLHLIGKDILRFHAVYWPAMLMSAKLPLP-KQIFSH-GFLTKDGQKMSKSLGNTVNPF 319

Query: 290 ELLETKKFGGRSWPAPVIRLAML 312
           +L+E        + +  +R   L
Sbjct: 320 DLVER-------YGSDAVRYYFL 335



 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 40/124 (32%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV+ R  R        + V  IT  D+      + E  +     
Sbjct: 20  VNDVPHIGSAYTTMIADVIARFKRLQG-----SSVLLITGTDEH---GQKIERTAEAKGL 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                  +  + F     +L         R T  NH   +    Q +   G  Y A  + 
Sbjct: 72  EPQEHCDRIVESFESLWQKLNIQY-DRFSRTTAKNHGAIVKEFFQRVWEQGDIYLAQQQG 130

Query: 153 IFDT 156
            +  
Sbjct: 131 WYCV 134


>gi|328954955|ref|YP_004372288.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455279|gb|AEB06473.1| methionyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 542

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 38/124 (30%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   ++ DV+ R  R    +     V+ +T +D+   + +           
Sbjct: 17  VNARPHLGTAYATMLADVMARFKRASGAD-----VKFLTGMDEHGEKVSEAAIAH---GV 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                       F      L         R T   H+  +  L+Q +   G  Y+   + 
Sbjct: 69  TPQRWCDCMEPAFRDMWAALEISNDDF-IRTTEQRHVRGVQKLLQILRDRGFIYKDAYDG 127

Query: 153 IFDT 156
            +  
Sbjct: 128 WYCV 131


>gi|237750164|ref|ZP_04580644.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229374351|gb|EEO24742.1| arginyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 556

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 27/88 (30%), Gaps = 17/88 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA--------- 83
           PT     HIG+AR  I   VL R+ +    +    Y  N  D   +I   A         
Sbjct: 132 PT--GPLHIGHARGAIFGSVLQRIGKRLGYDIKGEYYVN--DAGSQIDMLALSVYNSAAK 187

Query: 84  ----RQEHPSIPINDAISIITSKNTQQF 107
                     +   + I  +     + F
Sbjct: 188 ILNLESLSGEVYKGEYIDSVAQDAIKHF 215


>gi|258512336|ref|YP_003185770.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257479062|gb|ACV59381.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 1046

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 10/86 (11%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ +    L+  G+KMSKS GN I   E  +          A  +R
Sbjct: 571 LAISTAVTGKAPYKNVLVLGHVLDEHGKKMSKSKGNVIDPFEAFDKHG-------ADAVR 623

Query: 309 LAMLM--THYREPIDFTVQRLTEAEI 332
              +     +   + +  + + EA+ 
Sbjct: 624 FYFVSNTQPWNSQLFY-HRAVAEAKA 648


>gi|73540380|ref|YP_294900.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134]
 gi|123760249|sp|Q474X7|SYM_RALEJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72117793|gb|AAZ60056.1| methionyl-tRNA synthetase [Ralstonia eutropha JMP134]
          Length = 688

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 294 HFIGKDILYFHTLFWPAMLR-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 351

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ +++ L 
Sbjct: 352 T------GMNPEWLRYYFAAK-----LNASMEDLD 375


>gi|116624918|ref|YP_827074.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
 gi|122252610|sp|Q01U81|SYL_SOLUE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116228080|gb|ABJ86789.1| leucyl-tRNA synthetase [Candidatus Solibacter usitatus Ellin6076]
          Length = 810

 Score = 40.2 bits (93), Expect = 0.68,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 71/208 (34%), Gaps = 37/208 (17%)

Query: 231 FDIHGGGLDLIFPHHENEI-----AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
            D + GG++    H           +        + A      G +  EG KMSKS GN 
Sbjct: 527 IDQYIGGIEHAILHLIYSRFFTKVMRDIGLISNNEPARRLFTQGMVIAEGAKMSKSKGNV 586

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
           +   +LL  K      + A   R+ +L      + +D+  +        L +  + +T  
Sbjct: 587 VG-ADLLADK------FGADTARMFVLSNVPPEKEVDWREEGAEGTYRFLGRVYRFTTRN 639

Query: 345 -------GIIDPAVLSALY-------NDLNTV----SAIQALHKLAR-----ESTKNHDL 381
                  G  D  V+  L+        D  T     + I ++ +L       E   +  +
Sbjct: 640 VPAQQRSGDADRKVVRKLHQTLKKITEDFETRWHFNTCIASIMELVNLLYAEEQNISAAV 699

Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAI 409
           +P    S  ++ +     +L++ +   I
Sbjct: 700 MPQILESLALM-LAPFAPYLSQEMWEEI 726


>gi|319778238|ref|YP_004129151.1| Isoleucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
 gi|317108262|gb|ADU91008.1| Isoleucyl-tRNA synthetase [Taylorella equigenitalis MCE9]
          Length = 941

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +GRKMSKS GN I   ++ +T         A +IRL    T Y   +  + Q 
Sbjct: 600 HGFVVDGQGRKMSKSVGNVIAPKQVADTLG-------AEIIRLWTAATDYSGELSISDQI 652

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 653 LKRVVESYRRIRNT 666


>gi|242373479|ref|ZP_04819053.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348842|gb|EES40444.1| isoleucyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 916

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++       +
Sbjct: 64  HMGHALNKIIKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSIAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  K      KD  RL      + P  T    +    I L   +   G  Y+    
Sbjct: 123 KCKEFALKQVDIQKKDFKRLGVRGDFNNPYITLTPEYEAAQIRLFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + 
Sbjct: 585 HGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLADVRISDEI 637

Query: 327 LTEAEILLSKWPQT 340
           L +   +  K   T
Sbjct: 638 LKQTSDVYRKIRNT 651


>gi|195952792|ref|YP_002121082.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|195932404|gb|ACG57104.1| arginyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 539

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 37/99 (37%), Gaps = 7/99 (7%)

Query: 16  TEFQAIDPSNIRM-YVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
             F       I + YV   PT     H+G+ R  ++ DVLYRL R++  +    Y  N  
Sbjct: 110 EAFGIKKEDKINLEYVSANPT--GPLHLGHGRGAVIGDVLYRLFRFFDIKVDREYYIN-- 165

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
           D  +++   A+         D            ++KD  
Sbjct: 166 DAGNQVNLLAKS-VMHYINQDLYPFPEDGYKGDYIKDIA 203


>gi|153952361|ref|YP_001398297.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
 gi|152939807|gb|ABS44548.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
          Length = 870

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 597


>gi|157828457|ref|YP_001494699.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933175|ref|YP_001649964.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166231640|sp|A8GS16|SYL_RICRS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083140|sp|B0BXI2|SYL_RICRO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157800938|gb|ABV76191.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908262|gb|ABY72558.1| leucyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 835

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  +  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNEFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             IRL +L  +   + ++++   +      ++K      +        + +L +D+N   
Sbjct: 623 DAIRLFVLSDSPPEKDLEWSASGIEGCSRFINKLEYMFKA--------IDSLKDDVN-SE 673

Query: 364 AIQALHKLARESTK 377
             + L++L   + K
Sbjct: 674 VNKELNRLVHFTIK 687


>gi|315124298|ref|YP_004066302.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|315018020|gb|ADT66113.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 645

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 276 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 328

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 329 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 372


>gi|300310736|ref|YP_003774828.1| isoleucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
 gi|300073521|gb|ADJ62920.1| isoleucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
          Length = 964

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 11/106 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ EGRKMSKS  N +   ++ ++         A ++RL +
Sbjct: 610 SSMLNGRAPYKALLTHGFVVDGEGRKMSKSLKNGVEPQKVADSLG-------AEILRLWV 662

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLS 353
             + Y   I  + + L        +   T      +    DPA  +
Sbjct: 663 ASSDYSGEISISEEILKRVTEAYRRIRNTLRFLLANTSDFDPAQHA 708


>gi|283957243|ref|ZP_06374704.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
 gi|283791255|gb|EFC30063.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
          Length = 870

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 597


>gi|240281239|gb|EER44742.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
          Length = 325

 Score = 40.2 bits (93), Expect = 0.69,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 12/157 (7%)

Query: 10  TLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           +  R ++   + DP     YV  P  Y     H+G+   MI+ DVL R            
Sbjct: 38  SQSRGLSTAPSRDPDKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTD--- 94

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT- 126
             + +T  D+  ++    +  +  +      +  +N + F ++  R   +   H  R T 
Sbjct: 95  -AKLLTGTDEHGLK---IQQAAAALGMTPQALCDQNCKTF-QNLARKGNVGYDHFIRTTD 149

Query: 127 -NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNY 162
             H   + Y    +   G+ Y + +E  +  S    Y
Sbjct: 150 AEHKEAVRYFWDMLNHRGYIYTSKHEGWYSVSDEAFY 186


>gi|332637538|ref|ZP_08416401.1| leucyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 804

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 64/164 (39%), Gaps = 16/164 (9%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E    +      L     KMSKS GN +  ++++E        + A  +RL  M 
Sbjct: 554 VVHTKEPFQKLANQGMILGENHEKMSKSKGNVVNPDDVVE-------QYGADTLRLYEMF 606

Query: 313 MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
           M    + I ++   L  +   L + W         +   + +   + L+     +  ++ 
Sbjct: 607 MGPLEQSIAWSEDGLAGSRRWLDRVWRLFIDDDDKLRDHITTVNDHKLD-----KIYNET 661

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQ 414
            ++ T +++ L    A + ++ I + + +  +N+ +  +E  ++
Sbjct: 662 VKKVTDDYEGLRFNTAISQMM-IFINEAYKAENLPVEYVEGFIK 704


>gi|224417704|ref|ZP_03655710.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 607

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 39/139 (28%), Gaps = 13/139 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D L R  R    E     V  +T  D+      + +  +   N 
Sbjct: 14  VNDVPHIGHAYTTIIADTLARYHRIQNEE-----VWFLTGTDEH---GQKIQQSAEKNNK 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANN 150
                  + + +F                R T+  H   +  +   +   G  Y  E   
Sbjct: 66  NPKEYVDEISAKFKNLWDSFGISY-DAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEYEG 124

Query: 151 EIIFDTSSIPNYGSFSRRK 169
                  S          K
Sbjct: 125 NYCISCESFFAKSQLINHK 143


>gi|15892508|ref|NP_360222.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|32130175|sp|Q92I35|SYL_RICCN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15619667|gb|AAL03123.1| leucyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 835

 Score = 40.2 bits (93), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  +  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNEFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             IRL +L  +   + ++++   +      ++K      +        + +L +D+N   
Sbjct: 623 DAIRLFVLSDSPPEKDLEWSASGIEGCSRFINKLEYMFKA--------IDSLKDDVN-SE 673

Query: 364 AIQALHKLARESTK 377
             + L++L   + K
Sbjct: 674 VNKELNRLVHFTIK 687


>gi|332527596|ref|ZP_08403643.1| isoleucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
 gi|332111999|gb|EGJ11976.1| isoleucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
          Length = 947

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 46/130 (35%), Gaps = 10/130 (7%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVL--YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           GP  Y     H+G+A   ++ D++   R L+ +  +    +  +   I++ I ++  +  
Sbjct: 64  GP-PYANGAIHMGHAVNKVLKDMIVKARQLKGFDAQYVPGWDCHGLPIENAIEKKHGRHL 122

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT----NHIPQMIYLIQNIILHG 143
               +        ++     + D  RL  L       AT    N   ++    + +I  G
Sbjct: 123 SRDDMQAKSRAYATEQIALQMADFKRLGVLGDWEHRYATMDPANEAGEIRAF-KRVIERG 181

Query: 144 HAYEANNEII 153
             Y     + 
Sbjct: 182 FVYRGLKPVY 191



 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 53/158 (33%), Gaps = 22/158 (13%)

Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
           D  L+ +S+ +   W   +  G   WH+           + F   G   DL    H+   
Sbjct: 544 DAALYTKSSDILEVW---FDSGSTFWHV-----LRGQHPEGFHKQGPEADLYLEGHDQHR 595

Query: 250 A-------QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
                    +C          +  H   ++ +GRKMSKS GN I   ++  T        
Sbjct: 596 GWFHSSLLLACALYGRAPYRGLLTHGFTVDSQGRKMSKSLGNGIEPQKVSSTLG------ 649

Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            A +IRL +  + Y   I    + L        +   T
Sbjct: 650 -AEIIRLWVAASDYSGDIAGDDKILARVVDAYRRIRNT 686


>gi|325143835|gb|EGC66151.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 968

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 634 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 686

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 687 LKRVTESYRRIRNTLS--------FLFANLSDFN 712


>gi|319651731|ref|ZP_08005857.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396550|gb|EFV77262.1| valyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 881

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ IH    + +GRKMSKS GN +   ++++  
Sbjct: 484 TGYDIIFFWVSRMIFQGLEFTGERPFQDVLIHGLVRDSQGRKMSKSLGNGVDPMDVID-- 541

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+++++       +K    S 
Sbjct: 542 -----QYGADSLRYFLSTGS--SPGQDLRFSMEKVEATWNFANKIWNASR 584


>gi|269216114|ref|ZP_06159968.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130373|gb|EEZ61451.1| methionine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 526

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 29/80 (36%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+   H     A    A       +    +GFL + G KMSKS GN I   +L+ 
Sbjct: 264 HFVGKDITRFHCVIWPAMLMAA--GLPVTHTVFGHGFLMVGGEKMSKSKGNGIRPADLVS 321

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                   + +   R   L 
Sbjct: 322 V-------YGSDAYRYYFLS 334



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 42/142 (29%), Gaps = 16/142 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   +  D + R  R    +     V  +T +D+   + A           
Sbjct: 15  VNAAPHLGTAYTTVAADAVARYQRMNGHD-----VAFVTGLDEHGQKVAETAEKH---GM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANN 150
                       F+     L   A T   R ++   +    +Q         G+ Y+   
Sbjct: 67  TPQEWCDSMVPAFMDAWKMLDI-AFTDFVRTSS--DRQTRTVQTFWNDLYEKGYLYKGAY 123

Query: 151 EIIFDTSSIPNYGSFSRRKIDE 172
           E  +       Y + S  + D+
Sbjct: 124 EGWYCVHE-ETYYAESDLETDD 144


>gi|262374208|ref|ZP_06067484.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262310766|gb|EEY91854.1| leucyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 874

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +T      ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLAAGFLETGNQTTTIDTANLSKDAQDLRRKTHETIQKVGDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   + K     ++D      A   +L +  
Sbjct: 744 IAALMELLNATNKFEAKDDNDAAVAREAITTLLTLLA 780


>gi|240013385|ref|ZP_04720298.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240120456|ref|ZP_04733418.1| isoleucyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|229096714|ref|ZP_04227685.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228686920|gb|EEL40827.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|218288777|ref|ZP_03493040.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218241135|gb|EED08311.1| isoleucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 1046

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 10/86 (11%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ +    L+  G+KMSKS GN I   E  +          A  +R
Sbjct: 571 LAISTAVTGKAPYKNVLVLGHVLDEHGKKMSKSKGNVIDPFEAFDKHG-------ADAVR 623

Query: 309 LAMLM--THYREPIDFTVQRLTEAEI 332
              +     +   + +  + + EA+ 
Sbjct: 624 FYFVSNTQPWNSQLFY-HRAVAEAKA 648


>gi|198426747|ref|XP_002131649.1| PREDICTED: similar to mitochondrial isoleucine tRNA synthetase
           [Ciona intestinalis]
          Length = 932

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMT 314
            +    N+ +H   L+ +G+KMSKS GN +    L    K   R  ++ A  +R  +  +
Sbjct: 593 GVAPYKNLMVHGFVLDEKGQKMSKSIGNVVDPMVLTNGGKNPQRDPAYGADALRWWVAES 652

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  + +  +   +  A   + K   +  
Sbjct: 653 NVHQDVHISTTIIKSAAESVQKIRNSVR 680


>gi|167580180|ref|ZP_02373054.1| methionyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
          Length = 709

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 365 A------GLNPEWLRYYF 376


>gi|118619731|ref|YP_908063.1| methionyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
 gi|118571841|gb|ABL06592.1| methionyl-tRNA synthetase MetS [Mycobacterium ulcerans Agy99]
          Length = 518

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   I  D + R  R    +     VR +T  D+  ++       +   +   + 
Sbjct: 17  PHVGHAYEYIATDAIARFKRLDGFD-----VRFLTGTDEHGLK---VAQAAAAADIPTAQ 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L   +     R T  +H      + + +   G  Y  +    +  
Sbjct: 69  LARRNSDVFQRMQEALNI-SFDRFIRTTDSDHYEASQEIWRRMDAAGDIYLDSYSGWYSV 127

Query: 157 S 157
            
Sbjct: 128 R 128



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D H  G D+I  H     A    A  IE    ++ H GFL+  G KMSKS GN I    L
Sbjct: 256 DQHMIGKDIIRFHAVYWPAFLMSA-GIELPRRVFAH-GFLHNRGEKMSKSLGNTIDPMGL 313

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +ET       +    +R  +L
Sbjct: 314 IET-------YGVDQVRYFLL 327


>gi|284159400|ref|YP_441412.3| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
 gi|83654898|gb|ABC38961.1| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
          Length = 770

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 359 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 416

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 417 A------GLNPEWLRYYF 428


>gi|299139450|ref|ZP_07032625.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298598719|gb|EFI54882.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 855

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 55/145 (37%), Gaps = 15/145 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC-----ADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
             D + GG++    H       +         +  + A      G +  +G KMSKS GN
Sbjct: 549 PIDQYIGGVEHAILHLIYSRFWTKVMRDLGLIKNAEPAERLFTQGMVIKDGAKMSKSKGN 608

Query: 285 FITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
            ++ +E++         + A   R  A+        +++  + +      L++  + ++ 
Sbjct: 609 VVSPDEMISR-------YGADATRMYALFAAPPDRDLEWQEEGVAGISRFLARVYRLTSK 661

Query: 344 KGIIDPAVL-SALYNDLNTVSAIQA 367
              +   +  +A  +++   SA+ A
Sbjct: 662 FAPVVRELEKNAHGDEI-APSALAA 685


>gi|229828336|ref|ZP_04454405.1| hypothetical protein GCWU000342_00394 [Shuttleworthia satelles DSM
           14600]
 gi|229792930|gb|EEP29044.1| hypothetical protein GCWU000342_00394 [Shuttleworthia satelles DSM
           14600]
          Length = 570

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 42/117 (35%), Gaps = 26/117 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+ ++   + Y L + Y GE  + +       DD    + + E      
Sbjct: 48  PEPNGYLHIGHAKSIL---LNYGLSQEYGGEFHLRF-------DDTNPTKEKDE------ 91

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                       +    D   L      H   A+++  QM    + +I  G AY ++
Sbjct: 92  ----------FVEAIKADIHWLGVDWKDHLYFASDYFDQMYDYARKLIADGKAYASD 138


>gi|229102814|ref|ZP_04233510.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
 gi|228680599|gb|EEL34780.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229115692|ref|ZP_04245097.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
 gi|228667834|gb|EEL23271.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|254780933|ref|YP_003065346.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040610|gb|ACT57406.1| valyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 947

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 10/88 (11%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--L 312
              IE    +++H    +  G+KMSKS GN +   ++++        + A  +R     +
Sbjct: 570 GKGIEPFHIVYMHALVRDKNGQKMSKSKGNVVDPIDVID-------QYGADALRFYFSIM 622

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
               R  I+  ++R+      ++K+   
Sbjct: 623 AVQGR-DINLDLERIAGYRNFITKFWNA 649


>gi|147677147|ref|YP_001211362.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
 gi|146273244|dbj|BAF58993.1| valyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
          Length = 886

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I              ++IH   L+  GRKMSKS GN +   +++
Sbjct: 485 VLVTGRDIIFFWVARMIFSGLAFMNDVPFREVFIHGLVLDALGRKMSKSLGNGVDPIDVI 544

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           E+         A  +R  ++  +   P   + F  +RL  A    +K    S 
Sbjct: 545 ESHG-------ADSLRFMLITGN--TPGNDLRFHFERLDGARNFANKLWNASR 588


>gi|148545894|ref|YP_001265996.1| isoleucyl-tRNA synthetase [Pseudomonas putida F1]
 gi|166229759|sp|A5VY52|SYI_PSEP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|148509952|gb|ABQ76812.1| Isoleucyl-tRNA synthetase [Pseudomonas putida F1]
          Length = 943

 Score = 40.2 bits (93), Expect = 0.71,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS GN I   ++  T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDENGRKMSKSLGNTIEPEKVNNTLG-------ADILRLWVS 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   +  + Q L  +     +   T+ 
Sbjct: 637 ATDYSGEMAVSEQILQRSADAYRRIRNTAR 666


>gi|311069521|ref|YP_003974444.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310870038|gb|ADP33513.1| leucyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 804

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 21/98 (21%), Positives = 35/98 (35%), Gaps = 9/98 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++ +         A  +RL  M M   
Sbjct: 557 KEPFQQLYNQGMILGENNEKMSKSKGNVVNPDEIVSSHG-------ADTLRLYEMFMGPL 609

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
              I ++   L  A   L + W       G ++  +  
Sbjct: 610 DASIAWSESGLDGARRFLDRVWRLFIEDSGELNSKITE 647


>gi|262280963|ref|ZP_06058746.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257863|gb|EEY76598.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 874

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 44/167 (26%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +   S   ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVAGFLEKGNSTSTIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHIL-GIEVCKEHLNKNI 405
           I AL +L   S K     ++D+     A   +L  +E    HL++ +
Sbjct: 744 IAALMELLNASNKFEAKDDNDIAVEREAITTLLILLEPFAPHLSQTL 790


>gi|226952885|ref|ZP_03823349.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226836396|gb|EEH68779.1| leucyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 874

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 43/153 (28%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +T     +ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLAAGFLETGNQTTVIDTANLSKDAQDLRRKTHETIQKVGDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHIL 392
           I AL +L   + K     ++D      A   +L
Sbjct: 744 IAALMELLNATNKFEAKDDNDAAVAREAITTLL 776


>gi|157415046|ref|YP_001482302.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|157386010|gb|ABV52325.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
 gi|307747687|gb|ADN90957.1| Valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
          Length = 870

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 597


>gi|72383441|ref|YP_292796.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
 gi|84029557|sp|Q46HD5|SYI_PROMT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|72003291|gb|AAZ59093.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
          Length = 967

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL--ETKKFGGRSWPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN I    ++   + K    ++ A V+RL
Sbjct: 599 SVAVNEHAPFKKVLTHGFALDENGRKMSKSLGNIIDPLVIINGGSNKKLDPAYGADVLRL 658

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 659 WVSSVDYSADVPIGSNILKQISDVYRKVRNTSR 691


>gi|21910809|ref|NP_665077.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895501|ref|NP_801851.1| valyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759036|sp|Q8K6M9|SYV_STRP3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|21905014|gb|AAM79880.1| putative valine-tRNA ligase [Streptococcus pyogenes MGAS315]
 gi|28810747|dbj|BAC63684.1| putative valine-tRNA ligase [Streptococcus pyogenes SSI-1]
          Length = 882

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q+      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQTLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|331001236|ref|ZP_08324862.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
 gi|329568963|gb|EGG50759.1| methionine--tRNA ligase [Parasutterella excrementihominis YIT
           11859]
          Length = 700

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 47/183 (25%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTA---NIWIHNGFLNLEGRKMSKSNGNFITIN 289
           IH  G D+ + H     A        +      ++W H GF+ ++G+KMSKS G      
Sbjct: 296 IHIIGKDIAYFHTLFWPAML--HFSGKPFRVPDHVWAH-GFVTVDGQKMSKSRGTG---- 348

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDFTVQRL----------------- 327
             L+   +         +R       Y+     E +DF+                     
Sbjct: 349 --LDPLVYLELGMDPEWLRYYFA---YKLNSKVEDVDFSSADFISRTNSDLVGKYVNIAS 403

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLS---ALYNDLNTV-------SAIQALHKLARESTK 377
             A  L+ ++    +   I + ++++   A   D+N          A++A+ +LA +  +
Sbjct: 404 RSAGFLVKRFEGRVSDPAIAESSLIAEIKAAAPDINASFEGREYGKALRAVMELANKVNE 463

Query: 378 NHD 380
             D
Sbjct: 464 YVD 466


>gi|292655697|ref|YP_003535594.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371634|gb|ADE03861.1| isoleucyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 1043

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 62/173 (35%), Gaps = 22/173 (12%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H    + +GRKMSKS GN +T  E ++             +R  +L 
Sbjct: 579 AATGESPYKEVIMHGFANDKDGRKMSKSVGNIVTPEEAIDRAGRDP-------LRAYLLS 631

Query: 314 T-HYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
                  + F    L + +  L+      ++P         DPA       DL +   + 
Sbjct: 632 HDQQGVDLSFEWDGLADTQSTLNIFWNVFRFPLPYMDLDGYDPAEA-----DL-SAGELT 685

Query: 367 ALHKLA--RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
            + +    R  T   ++   ++       +    + + K++S    K ++ER+
Sbjct: 686 VVDEWVLSRLQTVEAEMADAWDDYEVSTALNTLLDFITKDVSRFYVKAIRERM 738


>gi|254671606|emb|CBA09289.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|254780802|ref|YP_003065215.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
 gi|254040479|gb|ACT57275.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
           psy62]
          Length = 869

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 27/83 (32%), Gaps = 8/83 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ DV+ R +R       V +              AR+       
Sbjct: 43  PYPSGNIHMGHLRNYVIGDVVARFMRASGY--SVLHPMGWDAFGMPAENAAREH------ 94

Query: 93  NDAISIITSKNTQQFVKDTTRLA 115
           N    + T +N +   K    + 
Sbjct: 95  NVHPKMWTYQNIKVMRKQLQSIG 117


>gi|169831629|ref|YP_001717611.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
 gi|169638473|gb|ACA59979.1| valyl-tRNA synthetase [Candidatus Desulforudis audaxviator MP104C]
          Length = 881

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 12/87 (13%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E  A ++IH   L+  GRKMSKS GN +   E++E        + A  +R  ++  +   
Sbjct: 508 EPFAEVFIHGLVLDALGRKMSKSLGNGVDPIEVIE-------KYGADSLRFMLVTGN--T 558

Query: 319 P---IDFTVQRLTEAEILLSKWPQTST 342
           P   + F  ++L  +    +K    S 
Sbjct: 559 PGNDLRFHFEKLESSRNFANKLWNASR 585


>gi|124025030|ref|YP_001014146.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
 gi|166229754|sp|A2C071|SYI_PROM1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123960098|gb|ABM74881.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
          Length = 967

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL--ETKKFGGRSWPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN I    ++   + K    ++ A V+RL
Sbjct: 599 SVAVNEHAPFKKVLTHGFALDENGRKMSKSLGNIIDPLVIINGGSNKKLDPAYGADVLRL 658

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 659 WVSSVDYSADVPIGSNILKQISDVYRKVRNTSR 691


>gi|28493445|ref|NP_787606.1| valyl-tRNA synthetase [Tropheryma whipplei str. Twist]
 gi|81437774|sp|Q83G51|SYV_TROWT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28476486|gb|AAO44575.1| valyl-tRNA synthetase [Tropheryma whipplei str. Twist]
          Length = 856

 Score = 40.2 bits (93), Expect = 0.72,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G D+I     + I +S  A       +  I    L+ + +KMSKS GN  T  ++L+   
Sbjct: 538 GQDIIRTWLFSSIIRSEYAHATAPWKSTAISGFILDPDRKKMSKSKGNAKTPKDILDR-- 595

Query: 297 FGGRSWPAPVIRLA 310
                + A  +R  
Sbjct: 596 -----YGADAVRYW 604


>gi|298492550|ref|YP_003722727.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
 gi|298234468|gb|ADI65604.1| leucyl-tRNA synthetase ['Nostoc azollae' 0708]
          Length = 859

 Score = 40.2 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 45/144 (31%), Gaps = 17/144 (11%)

Query: 19  QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
                +  + Y      Y     H+G+ R   + DV+ RL R       V +        
Sbjct: 30  TPQYHNQPKFYALSMFPYPSGRLHMGHVRNYTITDVIARLKRMQGY--LVLHPMGWDGFG 87

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP-RATNHIPQMIYL 135
                 A      I      +  T +N +Q  +   RL  L+   +   AT   P     
Sbjct: 88  LPAENAA------IDRGVPPAKWTYQNIEQMRQQLQRLG-LSLDWECELATCS-PDYYKW 139

Query: 136 IQ----NIILHGHAYEANNEIIFD 155
            Q     ++  G AY+    + +D
Sbjct: 140 TQWIFLQLLAAGLAYQREAAVNWD 163


>gi|167561950|ref|ZP_02354866.1| methionyl-tRNA synthetase [Burkholderia oklahomensis EO147]
          Length = 710

 Score = 40.2 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368


>gi|195953150|ref|YP_002121440.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
 gi|259511505|sp|B4U8K1|SYI_HYDS0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|195932762|gb|ACG57462.1| isoleucyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
          Length = 937

 Score = 40.2 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +       ++  H   ++ +G KMSKS GN I+  E++       + + A ++RL +
Sbjct: 599 SIASYGEAPFKSVVTHGFTVDEKGHKMSKSQGNVISPLEII-------KEYGADILRLWV 651

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +   Y E I      L        K   T
Sbjct: 652 ISEDYTEDIKLGKSILKRLAEDYKKIRNT 680


>gi|42784223|ref|NP_981470.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|68565988|sp|Q72Y44|SYM1_BACC1 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|42740154|gb|AAS44078.1| methionyl-tRNA synthetase, putative [Bacillus cereus ATCC 10987]
          Length = 544

 Score = 40.2 bits (93), Expect = 0.73,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRNLGFTY-DCYTRTDSEHHHKTVQKVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|325133568|gb|EGC56230.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M13399]
 gi|325206749|gb|ADZ02202.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|270261058|ref|ZP_06189331.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13]
 gi|270044542|gb|EFA17633.1| methionyl-tRNA synthetase [Serratia odorifera 4Rx13]
          Length = 722

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 338 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 394

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 395 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 446

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L ++L   +  Q     A    + +       A   I+ + ++   ++++  
Sbjct: 447 ISKRFGGQLADNLADPALYQTFVDAAGSIAEAYASRESGRAIREIMALADLANRYVDEQA 506

Query: 406 SIAIEK 411
              + K
Sbjct: 507 PWVVAK 512


>gi|121997514|ref|YP_001002301.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1]
 gi|187647725|sp|A1WUY7|SYM_HALHL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|121588919|gb|ABM61499.1| methionyl-tRNA synthetase [Halorhodospira halophila SL1]
          Length = 679

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A    A     TA ++ H GFL + G+KMSKS G FIT    L+
Sbjct: 289 HFIGKDIAYFHTLFWPAMLHGAGYRTPTA-VYCH-GFLTVNGQKMSKSRGTFITARSYLD 346

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 347 -------HLDPEYLRYY 356


>gi|325204795|gb|ADZ00249.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|325201521|gb|ADY96975.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M01-240149]
 gi|325207500|gb|ADZ02952.1| isoleucyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|325197664|gb|ADY93120.1| isoleucyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|325137586|gb|EGC60167.1| isoleucyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|308389936|gb|ADO32256.1| putative isoleucyl-tRNA synthetase [Neisseria meningitidis
           alpha710]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|229196425|ref|ZP_04323172.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293]
 gi|228587062|gb|EEK45133.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1293]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229586699|ref|YP_002845200.1| leucyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259511550|sp|C3PNE7|SYL_RICAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|228021749|gb|ACP53457.1| Leucyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 835

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 17/134 (12%)

Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
           H N +       +  +  +   +N  +     KMSKS  N I +  + E        + A
Sbjct: 570 HNNWLYPEEVVKKGNEFFHKESNNRVVQGRIEKMSKSKKNLIDLETMQE-------QYGA 622

Query: 305 PVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
             IRL +L  +   + ++++   +      ++K      +        + +L +D+N   
Sbjct: 623 DAIRLFVLSDSPPEKDLEWSASGIEGCSRFINKLEYMFKA--------IDSLKDDVN-SE 673

Query: 364 AIQALHKLARESTK 377
             + L++L   + K
Sbjct: 674 VNKELNRLVHFTIK 687


>gi|187649792|sp|Q2T087|SYM_BURTA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 718

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 365 A------GLNPEWLRYYF 376


>gi|55820807|ref|YP_139249.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55822708|ref|YP_141149.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|81820317|sp|Q5M0C5|SYI_STRT1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81820480|sp|Q5M4X2|SYI_STRT2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|55736792|gb|AAV60434.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55738693|gb|AAV62334.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 35/186 (18%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQ---- 366
                   +  ++  L++      K   T           L A  +D N T  A+     
Sbjct: 623 TSVDTSNDVRISMDILSQVSESYRKIRNTLR--------FLIANTSDFNPTTDAVAFEDL 674

Query: 367 ------------ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL- 412
                        L K  R++ +N + L I+ +  + + +E+   +L+    +  IE   
Sbjct: 675 RSVDQYMTIRFNQLVKNIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAK 734

Query: 413 -VQERL 417
            ++ R 
Sbjct: 735 SLERRQ 740


>gi|18977468|ref|NP_578825.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
 gi|18266873|sp|P46214|SYI_PYRFU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18893167|gb|AAL81220.1| isoleucyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
          Length = 1066

 Score = 40.2 bits (93), Expect = 0.74,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E++E              R 
Sbjct: 598 AASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVEKAGR-------DTFRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + + +   +L+
Sbjct: 651 YMLWA--TNPWENLKFSWKGVEQVRRMLN 677


>gi|322435729|ref|YP_004217941.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
 gi|321163456|gb|ADW69161.1| leucyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
          Length = 855

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 36/137 (26%), Gaps = 15/137 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D    + Y      Y     HIG+ R   + D L R +  +     V +           
Sbjct: 55  DSGKPKYYCLEMLPYPSGALHIGHVRNYAIGDALARFM--WMRGHNVLHPMGWDAFGLPA 112

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
              A      +  N      T  N     K   RL           T  +P      Q  
Sbjct: 113 ENAA------LKNNVPPREWTLSNIASMKKQFQRLGMG-FDWSKEVTTCLPDYYRWNQWL 165

Query: 138 --NIILHGHAYEANNEI 152
              +   G AY   +++
Sbjct: 166 FLKMFERGLAYRKKSKV 182



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 36/182 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI-----EKTANIWIHNGFLNLEGRKMSKSNGN 284
             D + GG++    H       +     +     ++ A      G +  +G KMSKS GN
Sbjct: 565 PIDQYIGGVEHAILHLIYSRFWTKVMRDLGLIVNDEPAERLFTQGMVIKDGAKMSKSKGN 624

Query: 285 FITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST- 342
            ++ + +++        + A   R  A+        +D+  + +      L K  + +T 
Sbjct: 625 VVSPDLMIDR-------YGADATRMYALFAAPPDRDLDWQEEGVAGISRFLGKIFRLTTK 677

Query: 343 -------SKGIIDPAVLSALY-------ND------LNTVSAIQALHKLARESTKNHDLL 382
                    G  D A+L  L+       +D       NT   I ++  L  E T N   +
Sbjct: 678 FAQLEGGEAGPADAALLRKLHQTIAKVTHDFSGRWHFNTS--ISSIMILVNEITANEAAI 735

Query: 383 PI 384
             
Sbjct: 736 DA 737


>gi|283777954|ref|YP_003368709.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068]
 gi|283436407|gb|ADB14849.1| methionyl-tRNA synthetase [Pirellula staleyi DSM 6068]
          Length = 696

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 8/51 (15%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            + IH GFL ++G KMSKS G F+     L       +      +R     
Sbjct: 316 KVHIH-GFLTVDGEKMSKSKGTFVKAETFL-------KHLDPAALRYFYAS 358


>gi|238795773|ref|ZP_04639287.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
 gi|238720499|gb|EEQ12301.1| Methionyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
          Length = 635

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 251 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 307

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 308 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 359

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A      ++      A   I+ + +V   ++++  
Sbjct: 360 INKRFAGKLADQLADPALYKTFTDAAVSIADAYNSRESSKAIREIMALADVANRYIDEQA 419

Query: 406 SIAIEK 411
              + K
Sbjct: 420 PWVVAK 425


>gi|229074897|ref|ZP_04207906.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
 gi|228708234|gb|EEL60398.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKDLFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|217032293|ref|ZP_03437790.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
 gi|298735963|ref|YP_003728488.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216946059|gb|EEC24672.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
 gi|298355152|emb|CBI66024.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 650

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKNQWDFFN-LDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|205356743|ref|ZP_03223503.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
 gi|205345382|gb|EDZ32025.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8421]
          Length = 870

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 597


>gi|221055079|ref|XP_002258678.1| trna ligase [Plasmodium knowlesi strain H]
 gi|193808748|emb|CAQ39450.1| trna ligase, putative [Plasmodium knowlesi strain H]
          Length = 727

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 46/127 (36%), Gaps = 7/127 (5%)

Query: 35  VY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           VY   D  HIG+A   ++ D++ R  ++ Y E     V   + +D+  ++    E  S  
Sbjct: 150 VYYANDKPHIGHAYCNVLSDIICRFAKWEYTEGRRKRVILFSGMDEHGLK---IERKSKK 206

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAYEANN 150
           +        +  +  +     +L           +      +  + + +  +G+ Y+   
Sbjct: 207 LKIPSMEYINNMSSYYQMMNDKLHVHVNIFYRTTSQFHKSFVQQVWKYLTQNGYIYKGTY 266

Query: 151 EIIFDTS 157
              +D +
Sbjct: 267 RGYYDVN 273


>gi|163867548|ref|YP_001608747.1| isoleucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
 gi|161017194|emb|CAK00752.1| Isoleucyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
          Length = 971

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 58/158 (36%), Gaps = 25/158 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G+KMSKS GN +   E+++T         A + RL +
Sbjct: 618 SCGTRACSPYKTVITHGFTLDENGKKMSKSLGNTVVPQEIIKTSG-------ADIFRLWV 670

Query: 312 LMTHYREPIDFTVQRL--------TEAEILLS---KWPQTSTSKGIIDPAVLSALYNDLN 360
           + T Y     +  QRL         ++   L    +W   + +    +     AL  DL 
Sbjct: 671 MTTDY-----WEDQRLGKKILQTNVDSYRKLRNAIRWMLGTLAYDEGEEISYDALP-DLE 724

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
            +  +  L +L +   + +D          +L   + +
Sbjct: 725 KLI-LHRLFELDQLVNRAYDEFDFKKIMRALLDFSIIE 761


>gi|86357775|ref|YP_469667.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42]
 gi|86281877|gb|ABC90940.1| methionyl-tRNA synthetase protein [Rhizobium etli CFN 42]
          Length = 516

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     + V ++    +   K+ + AR E        A   
Sbjct: 20  PHIGHAYELIATDAMARYQRLDG--RDVFFLTGTDEHGQKMQQTARAE------GIAPQA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +N+ +F +   +L   +     R T 
Sbjct: 72  LADRNSGEF-QAMAKLLNASNDDFIRTTQ 99


>gi|88808698|ref|ZP_01124208.1| methionine--tRNA ligase [Synechococcus sp. WH 7805]
 gi|88787686|gb|EAR18843.1| methionine--tRNA ligase [Synechococcus sp. WH 7805]
          Length = 525

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   D+H  G D++  H     A    A  +     ++ H GFL  EG+KM K+ GN + 
Sbjct: 261 GWPVDVHVIGKDILRFHAVYWPAMLMSA-GLPVPKRVFGH-GFLTREGQKMGKALGNVLD 318

Query: 288 INELLETKKFGGRSWPAPVIRLAML 312
              LLE             +R  +L
Sbjct: 319 PETLLERCGT-------DAVRWYLL 336


>gi|86152076|ref|ZP_01070288.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
 gi|85840861|gb|EAQ58111.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
          Length = 870

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 597


>gi|229155782|ref|ZP_04283888.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228627768|gb|EEK84489.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|222095809|ref|YP_002529866.1| isoleucyl-tRNA synthetase [Bacillus cereus Q1]
 gi|221239867|gb|ACM12577.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus Q1]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|194290515|ref|YP_002006422.1| methionyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
 gi|226710902|sp|B3R678|SYM_CUPTR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|193224350|emb|CAQ70361.1| methionine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
          Length = 688

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 294 HFIGKDILYFHTLFWPAMLR-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 351

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ +++ L 
Sbjct: 352 T------GMNPEWLRYYFAAK-----LNASMEDLD 375


>gi|239917380|ref|YP_002956938.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414136|ref|ZP_06245878.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838587|gb|ACS30384.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 541

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 12/129 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     VR +T  D+      + E  +     +   
Sbjct: 21  PHIGHAYEYIATDAMARFQRLDGRD-----VRFLTGTDEH---GQKMEQTAQQQGVSALE 72

Query: 99  ITSKNTQQFVK-DTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           + ++N   F + D   L         R   T+H   +  + + +  +G  Y  +    + 
Sbjct: 73  LATRNAAVFKEMDDDVLDISY-DRFIRTTDTDHAEAVREIWRRMEANGDIYLGSYAGWYS 131

Query: 156 TSSIPNYGS 164
                 +G 
Sbjct: 132 VRDERYFGE 140



 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/81 (32%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  +E    + IH GFLN  G KMSKS GN +   E 
Sbjct: 273 DLHVIGKDISRFHCIFWPAFLMSA-GLELPHRVMIH-GFLNNNGAKMSKSLGNVVHPREW 330

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +         +    IR  +L
Sbjct: 331 VAR-------YGLDAIRFFLL 344


>gi|28572442|ref|NP_789222.1| valyl-tRNA synthetase [Tropheryma whipplei TW08/27]
 gi|81629905|sp|Q83I17|SYV_TROW8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28410573|emb|CAD66960.1| class I tRNA synthetase (I, L, M and V) [Tropheryma whipplei
           TW08/27]
          Length = 856

 Score = 40.2 bits (93), Expect = 0.75,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G D+I     + I +S  A       +  I    L+ + +KMSKS GN  T  ++L+   
Sbjct: 538 GQDIIRTWLFSSIIRSEYAHATAPWKSTAISGFILDPDRKKMSKSKGNAKTPKDILDR-- 595

Query: 297 FGGRSWPAPVIRLA 310
                + A  +R  
Sbjct: 596 -----YGADAVRYW 604


>gi|301053711|ref|YP_003791922.1| isoleucyl-tRNA synthetase [Bacillus anthracis CI]
 gi|300375880|gb|ADK04784.1| isoleucyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
           CI]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|300690748|ref|YP_003751743.1| methionyl-tRNA synthetase (methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum PSI07]
 gi|299077808|emb|CBJ50446.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum PSI07]
          Length = 688

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 293 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 350

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 351 T------GMNPEWLRYYFAAK-----LNATMEDLD 374


>gi|228927261|ref|ZP_04090323.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228832408|gb|EEM77983.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|228985290|ref|ZP_04145453.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228774445|gb|EEM22848.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|257053975|ref|YP_003131808.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256692738|gb|ACV13075.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 697

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 30/93 (32%), Gaps = 15/93 (16%)

Query: 17 EFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN---- 71
          EF   +P+ +    CG P      HIG+ R  +  DVL R L      +   +V      
Sbjct: 5  EFPTENPAVV---TCGLPYANGDLHIGHLRTYVGGDVLTRSLEKLG--QQTAFVSGSDMH 59

Query: 72 -----ITDIDDKIIERARQEHPSIPINDAISII 99
               +  I+D I   A          +     
Sbjct: 60 GTPIAVQAIEDDIDPEAFALEYHEQYEETFPEF 92


>gi|167618283|ref|ZP_02386914.1| methionyl-tRNA synthetase [Burkholderia thailandensis Bt4]
          Length = 710

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLE-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 357 A------GLNPEWLRYYF 368


>gi|167629021|ref|YP_001679520.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|238687992|sp|B0TI89|SYR_HELMI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167591761|gb|ABZ83509.1| arginyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 563

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 54/314 (17%), Positives = 100/314 (31%), Gaps = 43/314 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT     H+GNAR   + D L  LLR    +    +  N  D  ++I   A+        
Sbjct: 136 PT--GLLHMGNARGAALGDTLANLLRLAGFDVQKEFYIN--DAGNQIENFAKSLEARYLQ 191

Query: 91  PINDAISIITSKNT-QQFVKDTTRLACLAPTHQ----------PRATNHIPQMIYLIQNI 139
            +   +         +  V+    L                        + + +  I+  
Sbjct: 192 LLGRDVPFPEEGYHGEDIVETMRGLIAKEGDKYLALESSLRREMLVKYALREKLDAIRRT 251

Query: 140 ILH-GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           +   G  Y    ++ F   S+ + G+  ++ ++  +    + E           LW ++T
Sbjct: 252 LERFGVVY----DVWFSEQSLHDSGAI-QQTLERLRANGYIYENEG-------ALWFKAT 299

Query: 199 PMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSCC 254
            +    +       G P +     A   +   + FD  I+  G D        + A    
Sbjct: 300 ALGEEKDEVLVRSNGIPTYFAADIAYHKNKFDRGFDWVINIWGADHHGHVSRMKNAVKAV 359

Query: 255 ADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
               +K   I +    L   G   +MSK  G +IT++EL+E              R   +
Sbjct: 360 GYDPKKLDVILMQLVRLYKGGEIVRMSKRTGQYITLDELIEEVGK-------DAARFFFV 412

Query: 313 MTHYREPIDFTVQR 326
           M      +DF +  
Sbjct: 413 MRGADAHLDFDLDL 426


>gi|52549705|gb|AAU83554.1| arginyl-tRNA synthetase [uncultured archaeon GZfos31B6]
          Length = 559

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 17/111 (15%), Positives = 35/111 (31%), Gaps = 13/111 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+ R  I+ D L R+L+    +  + Y  N  D+  ++   A           
Sbjct: 123 PNGPLHVGHIRNSIIGDTLARILKTAGYDVEIQYYVN--DMGRQVAIVAWAMDRFEFDGQ 180

Query: 95  --AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM----IYLIQNI 139
             A   I     +   +    L    P    +    + ++      +I+  
Sbjct: 181 KKADHAIADVYIRANQE----LG-EDPDLVRQIDELMQRIEHGDAEMIERF 226


>gi|47570085|ref|ZP_00240744.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
 gi|47553246|gb|EAL11638.1| isoleucyl-tRNA synthetase [Bacillus cereus G9241]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.76,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|323702604|ref|ZP_08114266.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
 gi|323532423|gb|EGB22300.1| arginyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
          Length = 561

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 59/321 (18%), Positives = 106/321 (33%), Gaps = 57/321 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE--RARQEHPSI 90
           PT     H+GNAR   + D L  +L +        Y  N  D  ++I    R+ +     
Sbjct: 138 PT--GLLHMGNARGAALGDSLAAILDFAGYRVSREYYIN--DAGNQIENFGRSLEVRYLQ 193

Query: 91  PINDAISIITSKNTQQFVKDTTR----------LACLAPT-HQPRATNHIPQMIYLIQ-N 138
            +   I +       + + DT +          +   + T  Q  A   + + +  I+  
Sbjct: 194 QLGQDIPMPEEGYHGEDIIDTVKGYLNKHGDGLVNVDSATRRQTLAAYALKEKLTHIRNT 253

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           ++  G  Y    ++ F   S+ + G+   R I+E +    + E  +        LW ++T
Sbjct: 254 LLDFGVVY----DVWFSEQSLHDSGAI-DRTINELRERGYIYEHEN-------ALWFKAT 301

Query: 199 PMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSCC 254
                 +       G P +     A   +   + FD  I   G D     H N +  S  
Sbjct: 302 EFGDEKDEVVVRSNGIPTYFAADIAYHRNKFERGFDWVIDIWGADHHG--HVNRMKGSME 359

Query: 255 ADRIE---------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
           A             +   ++     +      MSK  G F+T+ EL+E            
Sbjct: 360 ALGYSRDKLEVILMQLVRLFRGGEIVR-----MSKRTGQFVTLEELMEEVGR-------D 407

Query: 306 VIRLAMLMTHYREPIDFTVQR 326
             R   +M      +DF +  
Sbjct: 408 AARYFFVMRSPDSHLDFDLDL 428


>gi|312877507|ref|ZP_07737468.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795710|gb|EFR12078.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
          Length = 653

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 60/198 (30%), Gaps = 55/198 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H    I  +               +G+L LEG KMSKS GN +     
Sbjct: 255 DVHLVGKEIVRFHTI--IWPAMLMSLGLPLPKTVFGHGWLLLEGGKMSKSKGNVV----- 307

Query: 292 LETKKFGGRSWPAPVIRLAML------MTHYREPIDFTVQRLTE---------------- 329
                   + +    +R  +L         Y     F+ + L                  
Sbjct: 308 --DPVVLAQKYGVDSLRYFLLREIPFGADGY-----FSEEALKNRHNSDLANDLGNLLSR 360

Query: 330 AEILLSKWPQT----STSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARES 375
              ++ K+  +       K  ID  +             L ++    +A+  + KL   +
Sbjct: 361 TVAMIEKYFDSVIYLPEEKEEIDNELKDIAKEVYENVCKLLDEFQFSNALIEIWKLISRA 420

Query: 376 TKNHDLLPIFNASAHILG 393
            K  D          +LG
Sbjct: 421 NKYID-----QTMPWVLG 433


>gi|308180989|ref|YP_003925117.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046480|gb|ADN99023.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 932

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 16/188 (8%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             YL    D++  G D       + +  S           +      L+ +GRKMSKS G
Sbjct: 544 RSYLDYPADLYLEGSDQYRGWFNSSLITSVAVSGHAPYKQVLSQGFTLDNQGRKMSKSLG 603

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST- 342
           N I   +++       +   A ++R+ +        +  +++   +      K+  T   
Sbjct: 604 NTIAPADVI-------KQMGAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRF 656

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQA--LHKLAREST---KNHDLLPIFNASAHILGI 394
              +    DP      Y DL +V       L++   E+     ++D L I+    + L +
Sbjct: 657 MLGNTADFDPKANRVAYEDLASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTV 716

Query: 395 EVCKEHLN 402
           ++   +L+
Sbjct: 717 DLSNFYLD 724


>gi|303256180|ref|ZP_07342196.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47]
 gi|302860909|gb|EFL83984.1| methionine--tRNA ligase [Burkholderiales bacterium 1_1_47]
          Length = 700

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 47/183 (25%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTA---NIWIHNGFLNLEGRKMSKSNGNFITIN 289
           IH  G D+ + H     A        +      ++W H GF+ ++G+KMSKS G      
Sbjct: 296 IHIIGKDIAYFHTLFWPAML--HFSGKPFRVPDHVWAH-GFVTVDGQKMSKSRGTG---- 348

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDFTVQRL----------------- 327
             L+   +         +R       Y+     E +DF+                     
Sbjct: 349 --LDPLVYLELGMDPEWLRYYFA---YKLNSKVEDVDFSSADFISRTNSDLVGKYVNIAS 403

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLS---ALYNDLNTV-------SAIQALHKLARESTK 377
             A  L+ ++    +   I + ++++   A   D+N          A++A+ +LA +  +
Sbjct: 404 RSAGFLVKRFEGRVSDPAIAESSLIAEIKAAAPDINASFEDREYGKALRAVMELANKVNE 463

Query: 378 NHD 380
             D
Sbjct: 464 YVD 466


>gi|299066020|emb|CBJ37201.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum CMR15]
          Length = 688

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 41/225 (18%), Positives = 73/225 (32%), Gaps = 58/225 (25%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 293 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 350

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
           T            +R           ++ T++ L    + L  +                
Sbjct: 351 T------GLNPEWLRYYFAAK-----LNATMEDLD---LNLDDFIARVNSDLVGKFVNIA 396

Query: 341 STSKGIIDPAVL-----SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           S S G +          +AL N L     +  L + A +    ++      A   ++   
Sbjct: 397 SRSAGFLVKRFEGRVNDAALANPL-----MVQLREAAPQIADLYEKREYSKALRAVM--- 448

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSA-DYI-RKQLESK 438
                L   ++  ++            K +  A D   R +L + 
Sbjct: 449 ----ELADAVNAYVDT----------EKPWDLAKDEAQRDRLHAA 479



 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 18/115 (15%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEH 87
           Y  GP      HIG+    I  D+  R  R    E   TY     D     ++ RA +E 
Sbjct: 14  YANGP-----IHIGHMVEYIQTDIWVRFQRMRGHE---TYYVGADDTHGTPVMLRAEKE- 64

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                      +  +   +  +D          +   +T+   +   L + + L 
Sbjct: 65  -----GITPRQLIERVWTEHKRDFDNFLVSFDNYY--STDS-DENRELCERVYLK 111


>gi|291393537|ref|XP_002713327.1| PREDICTED: leucyl-tRNA synthetase 2, mitochondrial [Oryctolagus
           cuniculus]
          Length = 903

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 49/172 (28%), Gaps = 20/172 (11%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTLSDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ +I  N      T  N +   K    L  L  +     T  +P      Q  
Sbjct: 130 AFGLPAENAAIERNLHPESWTQSNIKHMRKQLDHLG-LWFSWDREVTTCLPDYYRWTQHL 188

Query: 138 --NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 189 FIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|257425247|ref|ZP_05601672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257271704|gb|EEV03842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
          Length = 748

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 398 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 450

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 451 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 482


>gi|240102645|ref|YP_002958954.1| isoleucyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910199|gb|ACS33090.1| Isoleucyl-tRNA synthetase (ileS) [Thermococcus gammatolerans EJ3]
          Length = 1066

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S  A        + +H   L+ +G KMSKS GN I   E+++ +            R 
Sbjct: 598 AASVIAFDTVPYRAVAMHGYVLDEKGDKMSKSLGNIIRPEEVVQKEGRDP-------FRF 650

Query: 310 AMLMTHYREPID---FTVQRLTEAEILLS 335
            ML      P +   F+ + L + + +L+
Sbjct: 651 YMLWA--TNPWENLRFSWKGLAQVKRMLN 677


>gi|195167926|ref|XP_002024783.1| GL17916 [Drosophila persimilis]
 gi|194108213|gb|EDW30256.1| GL17916 [Drosophila persimilis]
          Length = 871

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 48/165 (29%), Gaps = 30/165 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R           +N+             E+ +   
Sbjct: 71  PYPSGNLHMGHVRVYTISDAVARFQRMCG--------KNVFQPIGWDSFGLPAENAANQR 122

Query: 93  NDAISIITSKNTQQFVKDTTRLACL----------APTHQPRATNHIPQMIYLIQNIILH 142
               +  T +N  Q  +   RL C           +P +  R T H+  M      +   
Sbjct: 123 GVEPATWTQQNIAQMKQQLQRLGCSFDWTHELSTCSPQYY-RWTQHLFLM------LHKR 175

Query: 143 GHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           G AY+    +              +  ++D      R   K  KK
Sbjct: 176 GLAYQNEALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|167043820|gb|ABZ08510.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG3D24]
          Length = 1066

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 14/67 (20%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE----PID 321
            H   L+ +G KMSKS GN I  ++LL+        +P  ++R   +   ++      ++
Sbjct: 588 FHGHVLDEKGNKMSKSTGNVINASDLLD-------KYPVDLVRFYFM---WKSSPIETLN 637

Query: 322 FTVQRLT 328
           F+ + L 
Sbjct: 638 FSTKELM 644


>gi|187927245|ref|YP_001897732.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309780055|ref|ZP_07674808.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|238691829|sp|B2UDW0|SYR_RALPJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|187724135|gb|ACD25300.1| arginyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308921225|gb|EFP66869.1| arginine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 596

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 55/327 (16%), Positives = 103/327 (31%), Gaps = 57/327 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+ R   + D L  LL +   +    +  N     I ++   +  RAR   
Sbjct: 134 PT--GPLHVGHGRQAALGDALASLLDWQGHKVHREFYYNDAGVQIHNLAVSVQARARGYK 191

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
           P    N   +            D      +  +     T      +  I+ I      Y 
Sbjct: 192 PG-DANWPEAAYNGDYIADIAADYLAGKTVRASDGEPVTGERD--VENIEAIRRFAVTYL 248

Query: 147 --EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
             E + ++         Y   S    + + +          K    +  LW R+T     
Sbjct: 249 RNEQDIDLQAFGVKFDRYYLESSLYTEGKVQQTVDALVAAGKTYEQEGALWLRTTDDGDD 308

Query: 204 WESPWGR--GRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSCCADRI- 258
            +    +  G   + +   A  +   G+ F   I+  G D    HH   IA+     +  
Sbjct: 309 KDRVMRKSDGAYTYFVPDVAYHTTKWGRGFTQVINVQGSD----HH-GTIARVRAGLQGL 363

Query: 259 -----EKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLE---------------- 293
                +   +  +H   + +  +G   K+SK  G+++T+ +L+E                
Sbjct: 364 NIGIPKGYPDYVLHK-MVTVMKDGAEVKISKRAGSYVTVRDLIEWSNGDAESEAGVDTIR 422

Query: 294 -TKKFGGRSWPA------PVIRLAMLM 313
              + G  +WPA        +R  +L 
Sbjct: 423 ACVEAGEPNWPARFTRGRDAVRFFLLS 449


>gi|197294265|ref|YP_001798806.1| methionyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853592|emb|CAM11463.1| Methionyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 517

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 12/63 (19%)

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH---YREPIDFTVQR 326
           ++  +  KMSKS GN + +++LL       + +P   IR  +L  H   Y    + T + 
Sbjct: 292 WILFDKNKMSKSKGNVLYVDDLL-------KFFPIDTIRYFVL--HEIPYASDGNITYEL 342

Query: 327 LTE 329
           L E
Sbjct: 343 LVE 345


>gi|28378792|ref|NP_785684.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|81631129|sp|Q88V89|SYI_LACPL RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28271629|emb|CAD64535.1| isoleucine--tRNA ligase [Lactobacillus plantarum WCFS1]
          Length = 932

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 16/188 (8%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             YL    D++  G D       + +  S           +      L+ +GRKMSKS G
Sbjct: 544 RSYLDYPADLYLEGSDQYRGWFNSSLITSVAVSGHAPYKQVLSQGFTLDNQGRKMSKSLG 603

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST- 342
           N I   +++       +   A ++R+ +        +  +++   +      K+  T   
Sbjct: 604 NTIAPADVI-------KQMGAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRF 656

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQA--LHKLAREST---KNHDLLPIFNASAHILGI 394
              +    DP      Y DL +V       L++   E+     ++D L I+    + L +
Sbjct: 657 MLGNTADFDPKANRVAYEDLASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTV 716

Query: 395 EVCKEHLN 402
           ++   +L+
Sbjct: 717 DLSNFYLD 724


>gi|17547100|ref|NP_520502.1| methionyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
 gi|25009371|sp|Q8XWT9|SYM_RALSO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|17429401|emb|CAD16088.1| probable methionyl-trna synthetase (methionine--trna ligase)(metrs)
           protein [Ralstonia solanacearum GMI1000]
          Length = 688

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 293 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 350

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 351 T------GLNPEWLRYYFAAK-----LNATMEDLD 374



 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 36/115 (31%), Gaps = 18/115 (15%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEH 87
           Y  GP      HIG+    I  D+  R  R    E   TY     D     ++ RA +E 
Sbjct: 14  YANGP-----IHIGHMVEYIQTDIWVRFQRMRGHE---TYYVGADDTHGTPVMLRAEKE- 64

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                      +  +   +  +D          +   +T+   +   L + + L 
Sbjct: 65  -----GITPRQLIERVWTEHKRDFDNFLVSFDNYY--STDS-DENRELCERVYLK 111


>gi|116627611|ref|YP_820230.1| isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|122267791|sp|Q03L88|SYI_STRTD RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116100888|gb|ABJ66034.1| Isoleucyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
 gi|312278132|gb|ADQ62789.1| Isoleucyl-tRNA synthetase IleS [Streptococcus thermophilus ND03]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 68/186 (36%), Gaps = 35/186 (18%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQLLSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQ---- 366
                   +  ++  L++      K   T           L A  +D N T  A+     
Sbjct: 623 TSVDTSNDVRISMDILSQVSESYRKIRNTLR--------FLIANTSDFNPTTDAVAFEDL 674

Query: 367 ------------ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL- 412
                        L K  R++ +N + L I+ +  + + +E+   +L+    +  IE   
Sbjct: 675 RSVDQYMTIRFNQLVKNIRDAYENFEFLTIYKSLVNFINVELSAFYLDFAKDVVYIESAK 734

Query: 413 -VQERL 417
            ++ R 
Sbjct: 735 SLERRQ 740


>gi|317011232|gb|ADU84979.1| methionyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
          Length = 642

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T++  +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKSQWDFFN-LDYDGFIRTTDN--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137



 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 29/107 (27%)

Query: 245 HENEIAQSCCADR------IEKTANIW---------------IHNGFLNLEGRKMSKSNG 283
            EN +A   CA        +   A  W                 +G+  +EG KMSKS G
Sbjct: 248 LENRMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGVKMSKSLG 307

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N +   +L          +    +R  +L    + +  DF+ + L E
Sbjct: 308 NVLDAQKL-------AMEYGIEELRYFLLREVPFGQDGDFSKKALVE 347


>gi|218295828|ref|ZP_03496608.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
 gi|218243566|gb|EED10094.1| leucyl-tRNA synthetase [Thermus aquaticus Y51MC23]
          Length = 878

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 25/185 (13%), Positives = 47/185 (25%), Gaps = 18/185 (9%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           +              + V  P      H+G+ +   + DVL R  +    E  V +    
Sbjct: 24  KAKE--VPGKRGKQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRKVQGYE--VLHPMGW 79

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
                     A      +         T +N +Q  +    +  L        T   P  
Sbjct: 80  DAFGLPAENAA------LKFGLHPRDWTYQNIRQAKESLELMGILY-DWDREVTTCEPDY 132

Query: 133 IYLIQ----NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
               Q     +   G AY A   ++            +  ++ E +          K+  
Sbjct: 133 YRWNQWIFIKMWEKGLAYRA-GGLVNWCPKCQT--VLANEQVVEGRCWRHEDTPVEKREL 189

Query: 189 ADFIL 193
             + L
Sbjct: 190 TQWYL 194


>gi|196039843|ref|ZP_03107147.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196029546|gb|EDX68149.1| isoleucine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|148926943|ref|ZP_01810620.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
 gi|145845027|gb|EDK22124.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 870

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 597


>gi|86153201|ref|ZP_01071405.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|121613655|ref|YP_001000464.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
 gi|85842927|gb|EAQ60138.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni HB93-13]
 gi|87249321|gb|EAQ72281.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 870

 Score = 40.2 bits (93), Expect = 0.77,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNATNYLLLNESKFED 597


>gi|324326229|gb|ADY21489.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|15677669|ref|NP_274830.1| isoleucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|81784233|sp|Q9JXY7|SYI_NEIMB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|7227088|gb|AAF42168.1| isoleucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|325139653|gb|EGC62192.1| isoleucyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200894|gb|ADY96349.1| isoleucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 929

 Score = 40.2 bits (93), Expect = 0.78,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|307825405|ref|ZP_07655624.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96]
 gi|307733580|gb|EFO04438.1| methionyl-tRNA synthetase [Methylobacter tundripaludum SV96]
          Length = 672

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A     +A I+ H GFL + G KMSKS G FI     L+
Sbjct: 288 HFIGKDIIYFHALFWPAMLSGAHFRTPSA-IFAH-GFLTVNGEKMSKSRGTFIKARTYLD 345

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 346 -------HLNPEYLRYYF 356


>gi|299532760|ref|ZP_07046147.1| arginyl-tRNA synthetase [Comamonas testosteroni S44]
 gi|298718984|gb|EFI59954.1| arginyl-tRNA synthetase [Comamonas testosteroni S44]
          Length = 569

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 69/419 (16%), Positives = 125/419 (29%), Gaps = 90/419 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERAR--Q 85
           PT     H+G+ R   + D +  L      +    +  N     I  +      RA+  +
Sbjct: 130 PT--GPLHVGHGRQAAIGDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFK 187

Query: 86  EHPSIPINDAISIITSKNTQ-QFVKDTTRLA-----CLAPTHQPRATNHIPQMIYLIQNI 139
                   D+ + +        ++ D  +         A   +  A   +      I+  
Sbjct: 188 PGDECWPTDSENPLAKNFYNGDYIADIAKAFLAKETIKADDREFTANGDVEDY-DNIRQF 246

Query: 140 ILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--EKYHKKNPADFILW 194
                AY   E + ++         Y        +   +   V       K    D  LW
Sbjct: 247 A---VAYLRNEQDKDLQAFNLKFDEY-YLESSLYENGHVEATVNRLIANGKTYEQDGALW 302

Query: 195 KRSTPMEP-------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
            RST             +  +    P   +HI+          KV +I G        HH
Sbjct: 303 LRSTDYGDDKDRVMRKTDGGYTYFVPDVAYHIQKF---KRGFTKVVNIQGTD------HH 353

Query: 246 ENEIAQSCCADRI------EKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETK 295
              IA+     +       E   +  +H   + +   G   K+SK  G+++T+ +L+E  
Sbjct: 354 -GTIARVRAGLQAADVGIPEGYPDYVLHT-MVRVVRNGEEVKISKRAGSYVTLRDLIEWT 411

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP-IDFTVQR-LTEAEI----------LLSKWPQTSTS 343
                      +R  +L    R+P  ++T    L  A+             ++      +
Sbjct: 412 -------SKDAVRFFLLS---RKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRA 461

Query: 344 KGIIDPAVLSALYN-DLNT---VSAIQALHKLAR---------ESTKNHDLLPIFNASA 389
                 A L+AL + DL+      A   +  LA+         E    HD+       A
Sbjct: 462 WQEAGGAGLAALKDVDLSALEGPQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLA 520


>gi|284166734|ref|YP_003405013.1| lysyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016389|gb|ADB62340.1| lysyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 553

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 26/169 (15%), Positives = 56/169 (33%), Gaps = 25/169 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +   +  LEG+  S S GN I ++++LE  +         V+R         +  DF+++
Sbjct: 304 MVYEWFTLEGQPFSSSEGNVILVSDVLELLE-------PEVLRYFFAKDP-SKARDFSIE 355

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-- 383
           RL +      +       +   D           +  +  + ++ L    T+   L    
Sbjct: 356 RLDQLVDEFDRLEAIYFDEIEADE----------DEAAFAKRVYPLVVAETREERLRLPY 405

Query: 384 IFNASAHIL---GIEVCKEHLNKNISIAIEKLVQERLILL--KMKKFSS 427
            F A   +    G+         +I     +   E  +    K + ++ 
Sbjct: 406 TFAAVLGMFDDPGLREAVARKEGHIPDDAPEWAVEDALARVEKARNWAR 454


>gi|255320684|ref|ZP_05361861.1| isoleucine--tRNA ligase [Acinetobacter radioresistens SK82]
 gi|262380684|ref|ZP_06073837.1| isoleucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255302300|gb|EET81540.1| isoleucine--tRNA ligase [Acinetobacter radioresistens SK82]
 gi|262297632|gb|EEY85548.1| isoleucyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 946

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I +++++       +   A  +RL +
Sbjct: 589 SIAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLDDII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +          +   T
Sbjct: 642 ASSDYRYEIAASKEVFNRVSDSYRRIRNT 670


>gi|228914790|ref|ZP_04078399.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228845109|gb|EEM90151.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|228933508|ref|ZP_04096361.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826237|gb|EEM72017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|208434910|ref|YP_002266576.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432839|gb|ACI27710.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 650

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137



 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 29/107 (27%)

Query: 245 HENEIAQSCCADR------IEKTANIW---------------IHNGFLNLEGRKMSKSNG 283
            +N++A   CA        +   A  W                 +G+  +EG KMSKS G
Sbjct: 248 LDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGVKMSKSLG 307

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N +   +L          +    +R  +L    + +  DF+ + L E
Sbjct: 308 NVLDAQKL-------AMEYGIEELRYFLLREVPFGQDGDFSKKALVE 347


>gi|33861446|ref|NP_893007.1| leucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|48428530|sp|Q7V1I2|SYL_PROMP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|33634023|emb|CAE19348.1| Leucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 858

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 33/111 (29%), Gaps = 18/111 (16%)

Query: 7   IYNT--LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
           +YNT        +F A+      M+   P      H+G+ R  ++ D++ R  R+    K
Sbjct: 33  LYNTDEQASNKEKFYAL-----SMF---PYPSGNLHMGHVRNYVITDLIARFQRFQG--K 82

Query: 65  CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
            V +              A      I         T +N          L 
Sbjct: 83  VVLHPMGWDAFGLPAENAA------IERGINPDKWTKQNIAHMKSQLKLLG 127


>gi|307126771|ref|YP_003878802.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
 gi|306483833|gb|ADM90702.1| valyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
          Length = 883

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + +GRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEQGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 +    +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGTDSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|264680676|ref|YP_003280586.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2]
 gi|262211192|gb|ACY35290.1| arginyl-tRNA synthetase [Comamonas testosteroni CNB-2]
          Length = 569

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 69/419 (16%), Positives = 125/419 (29%), Gaps = 90/419 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERAR--Q 85
           PT     H+G+ R   + D +  L      +    +  N     I  +      RA+  +
Sbjct: 130 PT--GPLHVGHGRQAAIGDAISNLYSTQGWKVHREFYYNDAGVQIDTLTKSTQLRAKGFK 187

Query: 86  EHPSIPINDAISIITSKNTQ-QFVKDTTRLA-----CLAPTHQPRATNHIPQMIYLIQNI 139
                   D+ + +        ++ D  +         A   +  A   +      I+  
Sbjct: 188 PGDECWPTDSENPLAKNFYNGDYIADIAKAFLAKETIKADDREFTANGDVEDY-DNIRQF 246

Query: 140 ILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--EKYHKKNPADFILW 194
                AY   E + ++         Y        +   +   V       K    D  LW
Sbjct: 247 A---VAYLRNEQDKDLQAFNLKFDEY-YLESSLYENGHVEATVNRLIANGKTYEQDGALW 302

Query: 195 KRSTPMEP-------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
            RST             +  +    P   +HI+          KV +I G        HH
Sbjct: 303 LRSTDYGDDKDRVMRKTDGGYTYFVPDVAYHIQKF---KRGFTKVVNIQGTD------HH 353

Query: 246 ENEIAQSCCADRI------EKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETK 295
              IA+     +       E   +  +H   + +   G   K+SK  G+++T+ +L+E  
Sbjct: 354 -GTIARVRAGLQAADVGIPEGYPDYVLHT-MVRVVRNGEEVKISKRAGSYVTLRDLIEWT 411

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP-IDFTVQR-LTEAEI----------LLSKWPQTSTS 343
                      +R  +L    R+P  ++T    L  A+             ++      +
Sbjct: 412 -------SKDAVRFFLLS---RKPDTEYTFDVDLAVAQNNDNPVYYVQYAHARIQSVLRA 461

Query: 344 KGIIDPAVLSALYN-DLNT---VSAIQALHKLAR---------ESTKNHDLLPIFNASA 389
                 A L+AL + DL+      A   +  LA+         E    HD+       A
Sbjct: 462 WQEAGGAGLAALKDVDLSALEGPQAQALMLLLAKYPEMLTAAAEGNAPHDVTFYLRDLA 520


>gi|254779595|ref|YP_003057701.1| methionyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001507|emb|CAX29525.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Helicobacter pylori B38]
          Length = 650

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKNQWDFFN-LDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 29/107 (27%)

Query: 245 HENEIAQSCCADR------IEKTANIW---------------IHNGFLNLEGRKMSKSNG 283
            +N++A   CA        +   A  W                 +G+  +EG KMSKS G
Sbjct: 248 LDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGVKMSKSLG 307

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N +   +L          +    +R  +L    + +  DF+ + L E
Sbjct: 308 NVLDAQKL-------AMEYGIEELRYFLLREVPFGQDGDFSKKALVE 347


>gi|225620506|ref|YP_002721763.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|225215325|gb|ACN84059.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 651

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 11/123 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D+ HIG+    I  D + R  +    +  V ++    +  +KI  +A             
Sbjct: 17  DYLHIGHCYCTIATDTMARYKKIMGYD--VYFLTGTDEHGEKIARKAEA------AGTTP 68

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
                       +   RL     +H  R T+  H  ++  + + +   G+ Y+ + + ++
Sbjct: 69  KAYVDNIVNATKELWKRLHIDY-SHYIRTTDDYHERRVQKIFKILYDKGYIYKGSYKGLY 127

Query: 155 DTS 157
             S
Sbjct: 128 CVS 130


>gi|209554437|ref|YP_002284773.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
 gi|238064873|sp|B5ZBI3|SYL_UREU1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|209541938|gb|ACI60167.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str. ATCC
           33699]
          Length = 806

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++ +         A  +R+  M M      + ++   L      L +  +  
Sbjct: 586 GNVINPDDIIASHG-------ADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIID 348
            +   ++
Sbjct: 639 HNLSELE 645


>gi|195867880|ref|ZP_03079879.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
 gi|195660457|gb|EDX53715.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str. ATCC
           33175]
          Length = 806

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++ +         A  +R+  M M      + ++   L      L +  +  
Sbjct: 586 GNVINPDDIIASHG-------ADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIID 348
            +   ++
Sbjct: 639 HNLSELE 645


>gi|171920926|ref|ZP_02932075.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|225550463|ref|ZP_03771412.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|171903154|gb|EDT49443.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str. ATCC
           33698]
 gi|225379617|gb|EEH01979.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 806

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++ +         A  +R+  M M      + ++   L      L +  +  
Sbjct: 586 GNVINPDDIIASHG-------ADTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIID 348
            +   ++
Sbjct: 639 HNLSELE 645


>gi|156035535|ref|XP_001585879.1| hypothetical protein SS1G_12971 [Sclerotinia sclerotiorum 1980]
 gi|154698376|gb|EDN98114.1| hypothetical protein SS1G_12971 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 952

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 36/98 (36%), Gaps = 11/98 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET-----------KKFGGR 300
           +           +  H   L+  G+KMSKS GN I  +++++                 +
Sbjct: 584 AIADSSEAPFKTLITHGFTLDQSGKKMSKSIGNTIAPSQIMDGSLLPPVKMKKKGGNVSQ 643

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
            + A  +RL +  + Y + I      L      LSK+ 
Sbjct: 644 GFGADALRLWVASSDYTKDIVIGQPVLASVNSALSKYR 681


>gi|39944350|ref|XP_361712.1| hypothetical protein MGG_04186 [Magnaporthe oryzae 70-15]
 gi|145014923|gb|EDJ99491.1| hypothetical protein MGG_04186 [Magnaporthe oryzae 70-15]
          Length = 1189

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
             +  + + ++++ +  D+  +      +  +    E   ++++  IE+L+ ER  L++ 
Sbjct: 712 EVLATVVEKSKQNNQPVDVRDLQETV--VKELRQKIEKYTQSMTATIEQLIAERDQLVEE 769

Query: 423 KKFSSADYIR-----KQLESKGFILEDYKN 447
           K  + AD  R     +QL SK   L D  N
Sbjct: 770 KNRAMADRDRALLEFEQLSSKNAQLADMNN 799


>gi|254242167|ref|ZP_04935489.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
 gi|126195545|gb|EAZ59608.1| methionyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
          Length = 678

 Score = 40.2 bits (93), Expect = 0.79,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   + TA   +H G+L + G+KMSKS G F+     L+
Sbjct: 290 HCIGKDIVYFHALFWPAMLEGAGYRKPTALN-VH-GYLTVNGQKMSKSRGTFVKARTYLD 347

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 348 -------HLDPEYLRYYYAS 360


>gi|229121748|ref|ZP_04250969.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
 gi|228661664|gb|EEL17283.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
          Length = 1033

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+E        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVE-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229158640|ref|ZP_04286698.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
 gi|228624624|gb|EEK81393.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
          Length = 544

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R    H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRSLGFTY-DCYTRTDGEHHHETVQNVFLRLLEE 112

Query: 143 GHAY 146
           GH Y
Sbjct: 113 GHIY 116


>gi|227903105|ref|ZP_04020910.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227869091|gb|EEJ76512.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 661

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 11/119 (9%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNA   I  D + R  R    +   T+    TD         + E  +           
Sbjct: 25  IGNAYTTIAADTMARYKRSQGFD---TFFLTGTD-----EHGLKIEQKAEAQGIKPKEFV 76

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            K    + K    L         R T   H+  +  + + ++  G  Y       +   
Sbjct: 77  DKMADSYKKLWKSLNISY-DKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSVE 134


>gi|210135200|ref|YP_002301639.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
 gi|210133168|gb|ACJ08159.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
          Length = 650

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +             KD      L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADS-ISAIFKDQWDFFNLDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGAY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137


>gi|261405376|ref|YP_003241617.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
 gi|261281839|gb|ACX63810.1| valyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
          Length = 889

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 58/150 (38%), Gaps = 14/150 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           +  IH    + EGRKMSKS GN I   E++E        + A  +R
Sbjct: 506 IFQGLEFTGQMPFKDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIE-------QYGADAMR 558

Query: 309 LAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTVS- 363
             +       + + F  +R+ +A    +K    S    +      +A  +   +L T   
Sbjct: 559 YMISTGSTPGQDLRFRWERVEQARNFANKIWNASRFALMNLEGFTAADIDISGELGTADR 618

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHIL 392
             +  L++ +R+ T+  D    F  +  +L
Sbjct: 619 WILHRLNETSRDITRLIDAYE-FGETGRLL 647


>gi|169832567|ref|YP_001694056.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
 gi|168995069|gb|ACA35681.1| valyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
          Length = 883

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 +    +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGTDSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|168177519|ref|ZP_02612183.1| leucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182671476|gb|EDT83450.1| leucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 813

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 20/148 (13%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEFGADVFRMYLMFGFDYTEGGAWSD 613

Query: 325 QRLTEAEI---LLSKWPQTSTSKGIIDPAVLSALYND---LN-----TVSAIQALHKLAR 373
             +         + +  + +  +        S +  D   LN     ++ +I       +
Sbjct: 614 DAIKSIGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQ 673

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +T    L+   NA +  LGI+  K  L
Sbjct: 674 FNTSIARLMEFTNALSKYLGIDAIKNAL 701


>gi|126459062|ref|YP_001055340.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
 gi|126248783|gb|ABO07874.1| arginyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
          Length = 629

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 18/91 (19%)

Query: 255 ADRIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELL----ETKKFGGRSWPAPV-- 306
           A   E  A   +H     +NL G KMS   G +I+++E+L    E      +     V  
Sbjct: 414 ALGHEDAAKNVVHYAYEMVNLPGAKMSARRGQYISLDEILDEAAERSAALVKEANPEVAG 473

Query: 307 ----------IRLAMLMTHYREPIDFTVQRL 327
                     +R A L T  R+PI+F    +
Sbjct: 474 VIAERVGVGSVRYAFLSTGPRKPIEFKWDAV 504


>gi|119487032|ref|ZP_01620904.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
 gi|119455961|gb|EAW37095.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
          Length = 534

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 52/132 (39%), Gaps = 28/132 (21%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G    +H  G D++  H     A    AD       I+ H GFL  +G+KM KS GN + 
Sbjct: 259 GWPISLHLIGKDILRFHAVYWPAMLMSADIPLPG-RIFGH-GFLTKDGKKMGKSLGNTLD 316

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
             EL+       R + +  +R   L     + I+F      + +  L+++  T  +    
Sbjct: 317 PVELV-------RQFGSDAVRYYFL-----KEIEFG----QDGDFNLTRFINTVNAD--- 357

Query: 348 DPAVLSALYNDL 359
                  L NDL
Sbjct: 358 -------LANDL 362


>gi|58336554|ref|YP_193139.1| methionyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|58253871|gb|AAV42108.1| met-tRNA synthetase [Lactobacillus acidophilus NCFM]
          Length = 658

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 11/119 (9%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNA   I  D + R  R    +   T+    TD         + E  +           
Sbjct: 22  IGNAYTTIAADTMARYKRSQGFD---TFFLTGTD-----EHGLKIEQKAEAQGIKPKEFV 73

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            K    + K    L         R T   H+  +  + + ++  G  Y       +   
Sbjct: 74  DKMADSYKKLWKSLNISY-DKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSVE 131


>gi|20089476|ref|NP_615551.1| glutamyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|19914382|gb|AAM04031.1| glutamyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 579

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 42/140 (30%), Gaps = 32/140 (22%)

Query: 14  KITE---FQAID---PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           K       + ++   P  + M    P       +G+AR M+V          Y       
Sbjct: 94  KKEPEKGLKPLEGAEPGKVVM-RFAPNPNGPGTLGSARGMVV-------NSEYVKMYKGK 145

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +V    D D  I        P +   D            ++ D   L  + P     A++
Sbjct: 146 FVLRFDDTDPDIKR------PMLEAYDW-----------YLDDFKWLGVV-PDRVVYASD 187

Query: 128 HIPQMIYLIQNIILHGHAYE 147
           H P      + +I  G AY 
Sbjct: 188 HFPIYYDYARKLIEMGKAYV 207


>gi|83945321|ref|ZP_00957669.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83851155|gb|EAP89012.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 587

 Score = 40.2 bits (93), Expect = 0.80,   Method: Composition-based stats.
 Identities = 23/186 (12%), Positives = 46/186 (24%), Gaps = 57/186 (30%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYG----------------------------- 62
           GP V    H+G+ R  ++ D L RL+R+                                
Sbjct: 122 GPNVAKPMHVGHLRSSVIGDSLQRLMRFRGHDVTSDIHLGDWGLQMGHLVTELEDEKPDL 181

Query: 63  -EKCVTYVRNITD-----IDDKI----------------IERARQEHPSIPINDA-ISII 99
                 +     D     I+D                    R+R+    +         +
Sbjct: 182 VYYDADFTGPYPDEPPVTIEDLARLYPQASAKAKEDPERNARSRKATAELQAGRPGYRAL 241

Query: 100 TSKNT----QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
                        +D   L           ++    +  L+++    G A E++   I  
Sbjct: 242 LRHFINVSIAALKEDFGALGV-HFDLWKGESDVNDLIPELVRDFKDRGVAEESDGAWIVR 300

Query: 156 TSSIPN 161
            +   +
Sbjct: 301 VAREDD 306


>gi|325129574|gb|EGC52398.1| isoleucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 929

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|308183143|ref|YP_003927270.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065328|gb|ADO07220.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 653

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 43/139 (30%), Gaps = 16/139 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKNQWDFFN-LDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSRRK 169
              +   S  +Y + S+  
Sbjct: 122 SGYYCV-SCESYCAISKAD 139


>gi|297591363|ref|ZP_06950001.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|297576249|gb|EFH94965.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312438430|gb|ADQ77501.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 920

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 570 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 622

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 623 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 654



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 67  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 125

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 126 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 185

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 186 VYWSPSS 192


>gi|149005678|ref|ZP_01829417.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|147762618|gb|EDK69578.1| valyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
 gi|332077000|gb|EGI87462.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
          Length = 883

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 +    +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGTDSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|149236447|ref|XP_001524101.1| hypothetical protein LELG_04914 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452477|gb|EDK46733.1| hypothetical protein LELG_04914 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 930

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 43/152 (28%), Gaps = 18/152 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+ R  +            N+ +           E+ ++      +I 
Sbjct: 82  HLGHLRVYTISDVIARYKKMQGF--------NVINPMGWDAFGLPAENAAVERGIDPAIW 133

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANNEI-IF 154
           T +N     +                +   P+     Q I       G AY+   EI   
Sbjct: 134 TEQNIATMKEQMQCF-LADFDWDREISTCSPEYYKWTQKIFLMLFEKGLAYQKEAEINWD 192

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                      +  ++D +    R      KK
Sbjct: 193 PIDKT----VLANEQVDSEGRSWRSGALVEKK 220


>gi|149238235|ref|XP_001524994.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
 gi|146451591|gb|EDK45847.1| methionyl-tRNA synthetase, mitochondrial [Lodderomyces elongisporus
           NRRL YB-4239]
          Length = 608

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 35/70 (50%), Gaps = 9/70 (12%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTV 324
           +H+ +L+ +G KMSKS GN I   ++L+        +    +R   +  ++  +   ++ 
Sbjct: 350 VHSHWLS-DGVKMSKSLGNVIKPKDILD-------YYGIDPVRFFFMENSNISDDCKYSD 401

Query: 325 QRLTEAEILL 334
           + + ++  LL
Sbjct: 402 ELIHQSRGLL 411


>gi|49483356|ref|YP_040580.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257427907|ref|ZP_05604305.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430540|ref|ZP_05606922.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433301|ref|ZP_05609659.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436143|ref|ZP_05612190.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903745|ref|ZP_06311633.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282905509|ref|ZP_06313364.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282910766|ref|ZP_06318569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913969|ref|ZP_06321756.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282918891|ref|ZP_06326626.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282924014|ref|ZP_06331690.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957935|ref|ZP_06375386.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293501002|ref|ZP_06666853.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509960|ref|ZP_06668669.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293526549|ref|ZP_06671234.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295427679|ref|ZP_06820311.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|1174521|sp|P41972|SYI1_STAAU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81651290|sp|Q6GHP2|SYI_STAAR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|437916|emb|CAA52296.1| isoleucyl-tRNA synthetase [Staphylococcus aureus]
 gi|49241485|emb|CAG40171.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257274748|gb|EEV06235.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278668|gb|EEV09287.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281394|gb|EEV11531.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284425|gb|EEV14545.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282313986|gb|EFB44378.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282316701|gb|EFB47075.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322037|gb|EFB52361.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282325371|gb|EFB55680.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282330801|gb|EFB60315.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595363|gb|EFC00327.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790084|gb|EFC28901.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920621|gb|EFD97684.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291096007|gb|EFE26268.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467410|gb|EFF09927.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128037|gb|EFG57671.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|315194079|gb|EFU24472.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|329728844|gb|EGG65265.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|325124001|gb|ADY83524.1| isoleucyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 945

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 13/113 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALY-NDL 359
             + YR  I  + +  +       +   T      +     P+   AL  +DL
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNTLRFLLANLNGFKPS-TDALDVDDL 693


>gi|323440965|gb|EGA98672.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442282|gb|EGA99912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMAEKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|316984442|gb|EFV63415.1| isoleucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 809

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|294848186|ref|ZP_06788933.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294824986|gb|EFG41408.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9754]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|283770255|ref|ZP_06343147.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460402|gb|EFC07492.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|253733568|ref|ZP_04867733.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304381246|ref|ZP_07363899.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|253728438|gb|EES97167.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|304340229|gb|EFM06170.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140992|gb|EFW32839.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA131]
          Length = 920

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 570 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 622

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 623 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 654



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 67  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 125

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 126 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 185

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 186 VYWSPSS 192


>gi|238062568|ref|ZP_04607277.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237884379|gb|EEP73207.1| methionyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 603

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 17/119 (14%)

Query: 29  YVCGPTVYDFAHIGNARPM-IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      HIG+     +  DV  R +R       V  V    +    I  +A  E 
Sbjct: 15  YANGPR-----HIGHVSGFGVPSDVFARYMRMAG--HDVLMVSGTDEHGTPIQVQADAE- 66

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGH 144
                      +  +  +   +D   L  L+     R T  NH   +  L   +  +G+
Sbjct: 67  -----GVTPRELADRYNRVIAEDLRALG-LSYDLFTRTTTRNHYAVVQELFSGLHRNGY 119


>gi|161869382|ref|YP_001598549.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|189082328|sp|A9M1J7|SYI_NEIM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|161594935|gb|ABX72595.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 929

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|82750799|ref|YP_416540.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123754638|sp|Q2YXH4|SYI_STAAB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|82656330|emb|CAI80746.1| isoleucyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.81,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|312829587|emb|CBX34429.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|309778072|ref|ZP_07673011.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914166|gb|EFP59967.1| isoleucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 908

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 13/142 (9%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           AM    LG   D++  G D       + +              +  H   ++ +G KMSK
Sbjct: 537 AMMERGLGYPADLYFEGSDQYRGWFNSSLIIGTAVHGHSPYKQVLSHGFVMDGKGVKMSK 596

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S  N +   E+        + + A ++RL      Y+     + + L +      K   T
Sbjct: 597 SQWNAVAPGEIT-------KKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNT 649

Query: 341 ST---SKGIIDPAVLSALYNDL 359
                +    D        +DL
Sbjct: 650 FRFMLANVNPDEDFTK---DDL 668


>gi|298694484|gb|ADI97706.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|297807697|ref|XP_002871732.1| hypothetical protein ARALYDRAFT_326110 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317569|gb|EFH47991.1| hypothetical protein ARALYDRAFT_326110 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1101

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  +++++H    + +GRKMSKS GN I   + +       + +    +R  + + 
Sbjct: 747 FTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTI-------KDFGTDALRFTIALG 799

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              + ++ + +RLT  +   +K    
Sbjct: 800 TAGQDLNLSTERLTANKAFTNKLWNA 825


>gi|293611283|ref|ZP_06693581.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826534|gb|EFF84901.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 945

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 13/113 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALY-NDL 359
             + YR  I  + +  +       +   T      +     P+   AL  +DL
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNTLRFLLANLNGFKPS-TDALDVDDL 693


>gi|293390593|ref|ZP_06634927.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290951127|gb|EFE01246.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 686

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    AD  +  +NI++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIMYFHSLFWPAMLEGADFRKP-SNIFVH-GYVTVNGEKMSKSRGTFIQAATYL- 347

Query: 294 TKKFGGRSWPAPVIRLA 310
                 +      +R  
Sbjct: 348 ------KHLDPECLRYY 358


>gi|282916443|ref|ZP_06324205.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282319883|gb|EFB50231.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           D139]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|254673172|emb|CBA08035.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha275]
 gi|325135619|gb|EGC58236.1| isoleucyl-tRNA synthetase [Neisseria meningitidis M0579]
          Length = 929

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|221140635|ref|ZP_03565128.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|302751016|gb|ADL65193.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|220928627|ref|YP_002505536.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
 gi|219998955|gb|ACL75556.1| valyl-tRNA synthetase [Clostridium cellulolyticum H10]
          Length = 883

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I       + E    ++IH    + +GRKMSKS GN I   E+
Sbjct: 482 DVLVTGYDIIFFWVARMIFSGVEHMKQEPFKYVFIHGIVRDSQGRKMSKSLGNGIDPLEV 541

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +         +    +R A+ + +   P   + F+ +++  A    +K    S 
Sbjct: 542 IA-------QYGTDALRFALTIGN--SPGNDLRFSPEKVESARNFANKVWNASR 586


>gi|73662410|ref|YP_301191.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|90108439|sp|Q49Y96|SYV_STAS1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72494925|dbj|BAE18246.1| valyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 876

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTGKRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESIWNFINKIWNAAR 579


>gi|15645045|ref|NP_207215.1| methionyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501030|sp|P56127|SYM_HELPY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2313521|gb|AAD07483.1| methionyl-tRNA synthetase (metS) [Helicobacter pylori 26695]
          Length = 650

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 10/136 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-QEHPSIPIN 93
           V D  HIG+A   ++ D L +       E  V ++    +   KI + AR +        
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFFLTGTDEHGQKIEQSARLRNQSPKAYA 70

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           D+IS I       F  D         +   +   +  ++      +   G  Y+      
Sbjct: 71  DSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEI------MFEKGDIYKGAYSGY 124

Query: 154 FDTSSIPNYGSFSRRK 169
           +   S  +Y + S+  
Sbjct: 125 YCV-SCESYCAISKAD 139


>gi|15924183|ref|NP_371717.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926776|ref|NP_374309.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651763|ref|YP_186069.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87161418|ref|YP_493784.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194899|ref|YP_499699.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148267685|ref|YP_001246628.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150393743|ref|YP_001316418.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221315|ref|YP_001332137.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156979514|ref|YP_001441773.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|161509367|ref|YP_001575026.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253314953|ref|ZP_04838166.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253731812|ref|ZP_04865977.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|255005980|ref|ZP_05144581.2| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257795751|ref|ZP_05644730.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415975|ref|ZP_05682245.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258419722|ref|ZP_05682689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438764|ref|ZP_05689917.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258444530|ref|ZP_05692859.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258447637|ref|ZP_05695781.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258449479|ref|ZP_05697582.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451891|ref|ZP_05699912.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454858|ref|ZP_05702822.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262048766|ref|ZP_06021648.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262051692|ref|ZP_06023911.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269202808|ref|YP_003282077.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282892679|ref|ZP_06300914.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282919974|ref|ZP_06327703.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929238|ref|ZP_06336813.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024117|ref|ZP_06378515.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|295407131|ref|ZP_06816932.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296276131|ref|ZP_06858638.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297245983|ref|ZP_06929842.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|54039673|sp|P67509|SYI_STAAN RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|54042036|sp|P67508|SYI_STAAM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81859601|sp|Q5HGN8|SYI_STAAC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123407059|sp|Q2FZ82|SYI_STAA8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123749624|sp|Q2FHP4|SYI_STAA3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|166229773|sp|A7X1D8|SYI_STAA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|172048846|sp|A6QG93|SYI_STAAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189082335|sp|A6U113|SYI_STAA2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189082336|sp|A5IS79|SYI_STAA9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|189082337|sp|A8Z3N1|SYI_STAAT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|13700992|dbj|BAB42288.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14246963|dbj|BAB57355.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|57285949|gb|AAW38043.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87127392|gb|ABD21906.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202457|gb|ABD30267.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147740754|gb|ABQ49052.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946195|gb|ABR52131.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374115|dbj|BAF67375.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|156721649|dbj|BAF78066.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|160368176|gb|ABX29147.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253724462|gb|EES93191.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257789723|gb|EEV28063.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839311|gb|EEV63785.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257844307|gb|EEV68689.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848023|gb|EEV72016.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257850023|gb|EEV73976.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257853828|gb|EEV76787.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257857467|gb|EEV80365.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860499|gb|EEV83326.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863241|gb|EEV86005.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259160427|gb|EEW45452.1| Ile-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|259163222|gb|EEW47782.1| Ile-tRNA synthetase [Staphylococcus aureus D30]
 gi|262075098|gb|ACY11071.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282589197|gb|EFB94294.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594690|gb|EFB99674.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764676|gb|EFC04801.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285816875|gb|ADC37362.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294967984|gb|EFG44012.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297177147|gb|EFH36401.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|315130984|gb|EFT86968.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS03]
 gi|315196923|gb|EFU27266.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320143048|gb|EFW34838.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329313861|gb|AEB88274.1| Isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329725029|gb|EGG61525.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
 gi|329727539|gb|EGG63995.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.82,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|330718899|ref|ZP_08313499.1| valyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 873

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 52/137 (37%), Gaps = 17/137 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           N+ IH    + EGRKMSKS GN +   +++E  
Sbjct: 474 TGYDIIFFWVARMMFQGKEFTGERPFKNVLIHGLIRDGEGRKMSKSLGNGVDPMDVIE-- 531

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  +       +   FT +++  +   ++K    S         V+  
Sbjct: 532 -----KYGADALRWFLATGSTPGQDTRFTYEKMDASWNFINKIWNASRY-------VIMN 579

Query: 355 LYNDLNTVSAIQALHKL 371
           L  D  T + +    KL
Sbjct: 580 LAED--TPTKLPDFDKL 594


>gi|325141637|gb|EGC64099.1| isoleucyl-tRNA synthetase [Neisseria meningitidis 961-5945]
          Length = 929

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|325127582|gb|EGC50505.1| isoleucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 929

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|325263785|ref|ZP_08130518.1| glutamine--tRNA ligase [Clostridium sp. D5]
 gi|324030823|gb|EGB92105.1| glutamine--tRNA ligase [Clostridium sp. D5]
          Length = 555

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 26/117 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+ ++   + Y L + Y G+  + +       DD    + + E      
Sbjct: 33  PEPNGYLHIGHAKSIL---LNYGLAQEYGGQFNMRF-------DDTNPTKEKIE------ 76

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                           +D   L      H   A+++  QM      +I  G AY  +
Sbjct: 77  ----------FVDSIKEDIKWLGADWKDHLYFASDYFDQMYEYAVKLIKKGKAYVCD 123


>gi|294665009|ref|ZP_06730318.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
 gi|292605228|gb|EFF48570.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 10535]
          Length = 694

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 34/102 (33%), Gaps = 20/102 (19%)

Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-NG 269
           C+ M     G+ FD H         HH       N       A        A   +H NG
Sbjct: 268 CAQM-----GEDFDAHLVAGTQTELHHFIGKDIVNFHGLFWPAVLHGTGHRAPTRLHVNG 322

Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +L ++G KMSKS G F+     L+             +R   
Sbjct: 323 YLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|288904820|ref|YP_003430042.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|288731546|emb|CBI13101.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
          Length = 932

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 12/132 (9%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--R 84
           GP  Y     H+G+A   I  D++ R                   +  I+  + ++   R
Sbjct: 55  GP-PYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLP-IEQVLAKKGVKR 112

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           +E P     +           +  +D  RL   A    P  T    +    I +   +  
Sbjct: 113 KEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQIRVFGAMAD 172

Query: 142 HGHAYEANNEII 153
            G+ Y     + 
Sbjct: 173 KGYIYRGAKPVY 184



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 36/189 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
                   +  ++  L +      K   T           L A   D N          +
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTADFNPNTDVVAYENL 674

Query: 366 QALHK-----------LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLV 413
           +A+ K             R++ + +D + I+ A  + + +++   +L+    +  IE   
Sbjct: 675 RAVDKYMTVKFNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEA-- 732

Query: 414 QERLILLKM 422
               +  + 
Sbjct: 733 -ADNLARRQ 740


>gi|283470404|emb|CAQ49615.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           ST398]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|254804338|ref|YP_003082559.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667880|emb|CBA03973.1| Isoleucyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 929

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|226947407|ref|YP_002802498.1| leucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226844262|gb|ACO86928.1| leucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 813

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 20/148 (13%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEFGADVFRMYLMFGFDYTEGGAWSD 613

Query: 325 QRLTEAEI---LLSKWPQTSTSKGIIDPAVLSALYND---LN-----TVSAIQALHKLAR 373
             +         + +  + +  +        S +  D   LN     ++ +I       +
Sbjct: 614 DAIKSIGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQ 673

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +T    L+   NA +  LGI+  K  L
Sbjct: 674 FNTSIARLMEFTNALSKYLGIDAIKNAL 701


>gi|171186028|ref|YP_001794947.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
 gi|170935240|gb|ACB40501.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
          Length = 635

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 37/91 (40%), Gaps = 18/91 (19%)

Query: 255 ADRIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELL----ETKKFGGRSWPAPV-- 306
           A   ++ A   +H     +NL G KMS   G +I ++E+L    E      +     V  
Sbjct: 419 ALGFQEEAKRLMHYAYEMVNLPGAKMSARRGQYIALDEILDEAAERSAALVKEKNPEVAG 478

Query: 307 ----------IRLAMLMTHYREPIDFTVQRL 327
                     +R A L T  R+PI+F  + +
Sbjct: 479 VIAERVGVGSVRYAFLSTGPRKPIEFKWETV 509


>gi|149191128|ref|ZP_01869387.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
 gi|148835056|gb|EDL52034.1| arginyl-tRNA synthetase [Vibrio shilonii AK1]
          Length = 577

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 5/98 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER-ARQEHPSIP 91
           P V    H+G+ R  I+ D + R L +      V    +I D   +     A  E     
Sbjct: 122 PNVAKEMHVGHLRSTIIGDAVVRTLEFLG--HNVIRANHIGDWGTQFGMLIANLERVQQE 179

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
             +    ++    + F +++ +L         RA  ++
Sbjct: 180 SGEVSMELSD--LEAFYRESKKLYDEDAEFAERARGYV 215


>gi|9755723|emb|CAC01835.1| valine--tRNA ligase-like protein [Arabidopsis thaliana]
          Length = 1093

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  +++++H    + +GRKMSKS GN I   + +       + +    +R  + + 
Sbjct: 739 FTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTI-------KDFGTDALRFTIALG 791

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              + ++ + +RLT  +   +K    
Sbjct: 792 TAGQDLNLSTERLTANKAFTNKLWNA 817


>gi|228917671|ref|ZP_04081212.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228841908|gb|EEM87014.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 245

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 44/124 (35%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I +K  ++F +    L         R  + H  + +  +   ++  
Sbjct: 60  QE------GVTAKEIANKYHEEFERCFRNLGFTY-DCYTRTDSEHHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
            H Y
Sbjct: 113 EHIY 116


>gi|225856278|ref|YP_002737789.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
 gi|225724382|gb|ACO20234.1| valyl-tRNA synthetase [Streptococcus pneumoniae P1031]
          Length = 883

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 +    +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGTDSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|219111249|ref|XP_002177376.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411911|gb|EEC51839.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1066

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 60/189 (31%), Gaps = 22/189 (11%)

Query: 19  QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI--- 75
           + +D   + M +  P V    H+G+A    V D L R  R            +   I   
Sbjct: 114 RPVDEKFV-MVIPPPNVTGSLHLGHALTAAVEDTLTRWHRMKGHATLYVPGTDHAGIATQ 172

Query: 76  ---DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-QPRATNHIPQ 131
              +  +++   +    +   + +  +         K T +L  L  +    R    + +
Sbjct: 173 SVVEKMLMKSEGKSRHDLGREEFVKKVWEWKKDYGSKITNQLRSLGSSVDWSRERFTMDE 232

Query: 132 M-----IYLIQNIILHGHAYEAN--NEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEK 182
           M     +         G  Y A+          S     + S  ++D  E +  T +  K
Sbjct: 233 MLSKAVVEAFNRFHEKGLLYRADRLGNWSCALKS-----AISDIEVDFIELEGRTFLDVK 287

Query: 183 YHKKNPADF 191
            HK NP D 
Sbjct: 288 THKGNPNDP 296


>gi|120612103|ref|YP_971781.1| isoleucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
 gi|120590567|gb|ABM34007.1| Isoleucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
          Length = 959

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 55/167 (32%), Gaps = 27/167 (16%)

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA---- 250
           K +  +E  ++S    G   WH     +   + G   D  G   DL    H+        
Sbjct: 562 KSTDILEVWFDS----GSTFWH----VLRGTHAGMHHD-SGPEADLYLEGHDQHRGWFHS 612

Query: 251 ---QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
               +           +  H   ++ +G+KMSKS GN ++  ++            A +I
Sbjct: 613 SLLLASAIFGRAPYRGLLTHGFTVDGQGKKMSKSLGNTVSPQQI-------SGKLGAEII 665

Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
           RL +  T Y   +    + L        +   T      +    DPA
Sbjct: 666 RLWVASTDYSGDLAIDDKILARVVDAYRRIRNTLRFLLANVSDFDPA 712


>gi|41407070|ref|NP_959906.1| methionyl-tRNA synthetase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|41395421|gb|AAS03289.1| MetS [Mycobacterium avium subsp. paratuberculosis K-10]
          Length = 519

 Score = 39.8 bits (92), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+A   I  D + R  R    +     VR +T  D+  ++       +     
Sbjct: 13  PNGDPHVGHAYEYIATDAIARFKRLDGFD-----VRFLTGTDEHGLK---MVETAAAEGI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
             + +  +N+  F +   RL   +     R T  +H      + + +   G  Y  +   
Sbjct: 65  GTAELARRNSDVFQRLQERLNI-SFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123

Query: 153 IFDTS 157
            +   
Sbjct: 124 WYSVR 128


>gi|306832986|ref|ZP_07466118.1| isoleucine--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304424885|gb|EFM28019.1| isoleucine--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 932

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 12/132 (9%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--R 84
           GP  Y     H+G+A   I  D++ R                   +  I+  + ++   R
Sbjct: 55  GP-PYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLP-IEQVLAKKGVKR 112

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           +E P     +           +  +D  RL   A    P  T    +    I +   +  
Sbjct: 113 KEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQIRVFGAMAD 172

Query: 142 HGHAYEANNEII 153
            G+ Y     + 
Sbjct: 173 KGYIYRGAKPVY 184



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 36/189 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
                   +  ++  L +      K   T           L A   D N          +
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTADFNPNTDAVAYENL 674

Query: 366 QALHK-----------LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLV 413
           +A+ K             R++ + +D + I+ A  + + +++   +L+    +  IE   
Sbjct: 675 RAVDKYMTVKFNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEA-- 732

Query: 414 QERLILLKM 422
               +  + 
Sbjct: 733 -ADNLARRQ 740


>gi|297208165|ref|ZP_06924595.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300912243|ref|ZP_07129686.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|296886904|gb|EFH25807.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300886489|gb|EFK81691.1| isoleucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 920

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 570 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 622

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 623 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 654



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 67  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 125

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 126 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 185

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 186 VYWSPSS 192


>gi|118465949|ref|YP_880395.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
 gi|118167236|gb|ABK68133.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
          Length = 519

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+A   I  D + R  R    +     VR +T  D+  ++       +     
Sbjct: 13  PNGDPHVGHAYEYIATDAIARFKRLDGFD-----VRFLTGTDEHGLK---MVETAAAEGI 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
             + +  +N+  F +   RL   +     R T  +H      + + +   G  Y  +   
Sbjct: 65  GTAELARRNSDVFQRLQERLNI-SFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123

Query: 153 IFDTS 157
            +   
Sbjct: 124 WYSVR 128


>gi|21282805|ref|NP_645893.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486033|ref|YP_043254.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|39932218|sp|Q8NX29|SYI_STAAW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|81649443|sp|Q6GA19|SYI_STAAS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21204243|dbj|BAB94941.1| Ile-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244476|emb|CAG42904.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 917

 Score = 39.8 bits (92), Expect = 0.84,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|306830852|ref|ZP_07464014.1| isoleucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
 gi|304426875|gb|EFM29985.1| isoleucine--tRNA ligase [Streptococcus gallolyticus subsp.
           gallolyticus TX20005]
          Length = 932

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 12/132 (9%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--R 84
           GP  Y     H+G+A   I  D++ R                   +  I+  + ++   R
Sbjct: 55  GP-PYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLP-IEQVLAKKGVKR 112

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           +E P     +           +  +D  RL   A    P  T    +    I +   +  
Sbjct: 113 KEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQIRVFGAMAD 172

Query: 142 HGHAYEANNEII 153
            G+ Y     + 
Sbjct: 173 KGYIYRGAKPVY 184



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 36/189 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
                   +  ++  L +      K   T           L A   D N          +
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTADFNPNTDAVAYENL 674

Query: 366 QALHK-----------LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLV 413
           +A+ K             R++ + +D + I+ A  + + +++   +L+    +  IE   
Sbjct: 675 RAVDKYMTVKFNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEA-- 732

Query: 414 QERLILLKM 422
               +  + 
Sbjct: 733 -ADNLARRQ 740


>gi|257465312|ref|ZP_05629683.1| methionyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450972|gb|EEV25015.1| methionyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 687

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 37/175 (21%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A     ++ + T NI+ H G++ ++G KMSKS G FI  +  L 
Sbjct: 289 HFIGKDIVYFHSLFWPAMLEGCEQRKPT-NIFAH-GYVTVDGVKMSKSRGTFIQASTYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                 +      +R       Y   ++   +R+ + ++ L+ + Q              
Sbjct: 346 ------KHIDPECLRYY-----YAAKLN---ERIEDLDLSLTDFIQRVNSDIVNKLVNLA 391

Query: 341 STSKGIIDPAVLSALY---NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           S + G I       L    +D     A+ A      E    H     FN +  ++
Sbjct: 392 SRNAGFIAKRFEGKLATSLDD----QALFAEFVAQSEQIAAHYEAREFNKAIRVI 442


>gi|220917531|ref|YP_002492835.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|254782939|sp|B8JBE2|SYR_ANAD2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|219955385|gb|ACL65769.1| arginyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 598

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D +  LLR+   +    Y  N  D   ++   AR  H     
Sbjct: 133 PT--GPMHVGHGRNAVVGDGVQGLLRWAGFDVTREYYVN--DYGAQVQTLARSVHLRYQE 188

Query: 93  --NDAISIITSKNTQQFVKDTTR 113
                +++       ++VKD   
Sbjct: 189 LHGRTVTMPPKSYPGEYVKDIAA 211


>gi|241206359|ref|YP_002977455.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Rhizobium leguminosarum bv. trifolii WSM1325]
 gi|240860249|gb|ACS57916.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Rhizobium leguminosarum bv. trifolii WSM1325]
          Length = 767

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 47/144 (32%), Gaps = 34/144 (23%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL------------------ 359
           +P+  +     E    L++W      KG I P V   L  D+                  
Sbjct: 525 QPMFRSDGSRIECAEALARWVH--PEKGSIPPDVFIRLAEDMGIISDITRFVLFKACSEC 582

Query: 360 -NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI 418
            N    I     L+    ++ D+L +   +    G++  + HL    S  I++    R I
Sbjct: 583 MNWPEHIAVSVNLSARDLRDADILAVVAEALAHSGLDAARLHLEVTESCLIDEPAAVRAI 642

Query: 419 LLKMKKFSSADYIRKQLESKGFIL 442
           L              +L ++G  +
Sbjct: 643 L-------------AELRARGITI 653


>gi|148378189|ref|YP_001252730.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|153932754|ref|YP_001382590.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153935447|ref|YP_001386143.1| leucyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|166231597|sp|A7FPP5|SYL_CLOB1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231598|sp|A5HY79|SYL_CLOBH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148287673|emb|CAL81738.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|152928798|gb|ABS34298.1| leucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152931361|gb|ABS36860.1| leucine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 813

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 20/148 (13%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEFGADVFRMYLMFGFDYTEGGAWSD 613

Query: 325 QRLTEAEI---LLSKWPQTSTSKGIIDPAVLSALYND---LN-----TVSAIQALHKLAR 373
             +         + +  + +  +        S +  D   LN     ++ +I       +
Sbjct: 614 DAIKSIGKFVDRVERILENAREEIKNSKDNKSTMDKDEKELNYVRHHSIKSITEDIDKMQ 673

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHL 401
            +T    L+   NA +  LGI+  K  L
Sbjct: 674 FNTSIARLMEFTNALSKYLGIDAIKNAL 701


>gi|94968356|ref|YP_590404.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
 gi|94550406|gb|ABF40330.1| leucyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
          Length = 856

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/127 (14%), Positives = 42/127 (33%), Gaps = 15/127 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +            E    ++   G +  +G KMSK+ G
Sbjct: 557 PIDQYIGGVEHAILHLIYSRFWTKVMRDLGLVHNSEPVTRLFT-QGMVIKDGAKMSKNLG 615

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A   R+  +        +D+    +      L++  +   
Sbjct: 616 NVVAPDDMIA-------KYGADATRMYTLFAAPPDRDLDWQDAGVEGVSRFLARVYRLIA 668

Query: 343 SKGIIDP 349
              I+  
Sbjct: 669 QNPIVHA 675


>gi|59712361|ref|YP_205137.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
 gi|68565957|sp|Q5E3Z7|SYM_VIBF1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|59480462|gb|AAW86249.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
          Length = 686

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 56/174 (32%), Gaps = 30/174 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAGTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNSDVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
           S + G I       L ++             A    + ++      A   I  +
Sbjct: 394 SRNAGFITKRFDGKLADNFVEPELYNEFIAAADRIAELYETREFGRAIREITAL 447


>gi|15806450|ref|NP_295156.1| methionyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|25009407|sp|Q9RUF3|SYM_DEIRA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|6459194|gb|AAF11005.1|AE001988_1 methionyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 681

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++ PH          A  +     + +H+  L  +GRKM KS GN I   EL+ 
Sbjct: 274 HVIGKDILKPHAVFWPTMLRAA-GLPLYRRLVVHSHILAEDGRKMGKSLGNAIDPEELVA 332

Query: 294 TKKFGGRSWPAPVIRLAML 312
                  +WP   IR A+L
Sbjct: 333 -------AWPVDAIRYALL 344



 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I+ D + R  R     + VT+V    +  +KI + A +   +    + +  
Sbjct: 33  PHIGHVYEKILADAIARYQRLAG--RDVTFVMGTDEHGEKISKAAAKGGVTPQ--ELVDD 88

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           ++ +    F     +L         R T   H   +  ++Q +   G  Y A  E ++  
Sbjct: 89  LSER---AFQGLWKKLGISY-DFFIRTTSAKHKKYVQDVLQRVYDAGDIYFAEYEGLYSV 144

Query: 157 SS 158
            +
Sbjct: 145 GA 146


>gi|23016029|ref|ZP_00055790.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 866

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 48/151 (31%), Gaps = 20/151 (13%)

Query: 14  KITEFQA-IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F+A I P   + YV    P      H+G+ R   + DV+ R  R       V +  
Sbjct: 31  EKRCFEAEIAPGKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKGFN--VLHPM 88

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC------LAPTHQPR 124
                       A      I  N   +  T +N     +    +           T +P+
Sbjct: 89  GWDAFGLPAENAA------ISNNVHPAKWTRENIAAMREQLKSMGLSYDWRREVATCEPQ 142

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              H  +M     + + +G  Y   + + +D
Sbjct: 143 YYRHEQKMF---LDFLKNGLVYRKESWVNWD 170


>gi|317969852|ref|ZP_07971242.1| methionyl-tRNA synthetase [Synechococcus sp. CB0205]
          Length = 522

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 64/339 (18%), Positives = 97/339 (28%), Gaps = 86/339 (25%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  H+G+A   +  D L R  R    E     V  IT  D+      + +  +     
Sbjct: 12  VNDKPHLGSAYTTLACDALARFQRLKGEE-----VLFITGCDEH---GQKIQRTAEAAGL 63

Query: 95  AISIITSKNTQQFVKDTTRLAC----LAPTHQPRATNHIPQMIYLIQNIIL--------- 141
                    + Q+ +   R       L  T  PR    + Q    ++             
Sbjct: 64  TPQAHCDGVSAQYRELWDRWQISNNRLIRTTDPRHRQVVQQFFARVEASGDIVEGRQQGW 123

Query: 142 --------HGHAYEANNEIIFDTSSIPN-------YGSFSRRK--IDEQKMG-------- 176
                       +EA +                  +   SR +  I+             
Sbjct: 124 YCVACEEFKDDPHEAQDPECPIHRKPLEWRDELNLFFRLSRYQEQIEALISQPGFIQPVS 183

Query: 177 -TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG--------WHIECSAMSSHYL 227
             R  E + K+   DF +             PWG   PG        W        +  L
Sbjct: 184 RRREVENFVKQGLRDFSI--------SRINLPWGIPVPGHEGHTFYVWFDALLGYITALL 235

Query: 228 --GKVFD------------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
             G   D            +H  G D++  H     A    A  +   A ++ H GFL  
Sbjct: 236 EEGDAADLDTAISRGWPASVHVIGKDILRFHAVYWPAMLLSA-GLSLPAKVFGH-GFLTR 293

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           EG+KM KS GN +   +LLE             +R  +L
Sbjct: 294 EGQKMGKSLGNVLDPADLLERCGR-------DAVRWYLL 325


>gi|303232822|ref|ZP_07319506.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
 gi|302481012|gb|EFL44088.1| methionine--tRNA ligase [Atopobium vaginae PB189-T1-4]
          Length = 562

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 41/147 (27%), Gaps = 17/147 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   ++ DV  R  R          VR +T +D+   + A+          
Sbjct: 30  VNAAPHLGTAYCTLLCDVQARYRRSMGYN-----VRFLTGMDEHGEKVAQAAQEH---GY 81

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA-- 148
           +           F      L         R T   P+    +Q     +   G+ Y+   
Sbjct: 82  SPQEWCDAQAPLFKDLWKTLNISYDDF-IRTTE--PRQYKAVQTLWNRMRESGYLYKGTY 138

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
           +        +       S    + Q+ 
Sbjct: 139 DGWYCLPCETYFTPTQLSHAAQEHQRA 165


>gi|298675673|ref|YP_003727423.1| lysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288661|gb|ADI74627.1| lysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 530

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 32/98 (32%), Gaps = 13/98 (13%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----------ITDIDDKII 80
           G T     HIGN R ++  D +YR L        + Y+ +           + D   + I
Sbjct: 27  GITPSGHIHIGNMREVVTADAVYRALLDKDQNAELIYIADTYDPLRKVYPFLPDSYSEHI 86

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
            +   E P    N             F++  +++    
Sbjct: 87  GKPLSEIPCPCGN--CENYAQHFLTPFLESLSKMGIHP 122


>gi|296313351|ref|ZP_06863292.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296840168|gb|EFH24106.1| isoleucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 929

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ EG+KMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 595 HGFVVDGEGKKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 647

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 648 LKRVTESYRRIRNTLS--------FLFANLSDFN 673


>gi|296424632|ref|XP_002841851.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295638101|emb|CAZ86042.1| unnamed protein product [Tuber melanosporum]
          Length = 956

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             A +  H   L+ +G+KMSKS GN +   ++++ K        A  +RL +    Y + 
Sbjct: 588 PFAMVVTHGFCLDEKGKKMSKSLGNTMAPVDVIQPKGKSIGGIDA--LRLWVASCDYTKD 645

Query: 320 IDFTVQRLTEAEILLSKWPQT 340
           +      L      L K   T
Sbjct: 646 VSIGSTILDGVNENLRKLRVT 666


>gi|217978992|ref|YP_002363139.1| isoleucyl-tRNA synthetase [Methylocella silvestris BL2]
 gi|217504368|gb|ACK51777.1| isoleucyl-tRNA synthetase [Methylocella silvestris BL2]
          Length = 1071

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G+KMSKS GN      +++          A ++RL +
Sbjct: 716 SCGTRGRAPFDLVLTHGFVLDEKGQKMSKSQGNVTAPQTIIKDAG-------ADILRLWV 768

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +    + L        K   T
Sbjct: 769 AASDYSDDLRIGPEILKTFIETYRKLRNT 797


>gi|126341628|ref|XP_001379477.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Monodelphis domestica]
          Length = 903

 Score = 39.8 bits (92), Expect = 0.85,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 55/187 (29%), Gaps = 29/187 (15%)

Query: 13  RKITEFQAI---DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           R   EF  +   D S  + YV     Y     H+G+ R   + DV+ R  +         
Sbjct: 66  RLKDEFFKMSEADKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDVMARFQKMRG-----M 120

Query: 68  YVRNITDID--DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPR 124
            V N    D      E A  E    P        T  N +   +   +L  C +   +  
Sbjct: 121 QVINPMGWDAFGLPAENAAIEQSLHP-----QSWTQSNIKHMREQLDKLGLCFSWDREI- 174

Query: 125 ATNHIPQMIYLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            T  +P      Q     +   G AY     +              +  ++DE     R 
Sbjct: 175 -TTCLPDYYKWTQYLFIKLYEAGLAYRKEALVNWDPVDQT----VLANEQVDENGCSWRS 229

Query: 180 PEKYHKK 186
             K  +K
Sbjct: 230 GAKVEQK 236


>gi|325977750|ref|YP_004287466.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|325177678|emb|CBZ47722.1| isoleucyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 932

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 40/132 (30%), Gaps = 12/132 (9%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIERA--R 84
           GP  Y     H+G+A   I  D++ R                   +  I+  + ++   R
Sbjct: 55  GP-PYANGNIHVGHAMNKISKDIIVRSKSMSGFRAPYIPGWDTHGLP-IEQVLAKKGVKR 112

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           +E P     +           +  +D  RL   A    P  T    +    I +   +  
Sbjct: 113 KEIPLTEYLEMCREYALSQVDKQREDFKRLGVSADWENPYITLIPEYEAAQIRVFGAMAD 172

Query: 142 HGHAYEANNEII 153
            G+ Y     + 
Sbjct: 173 KGYIYRGAKPVY 184



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 65/189 (34%), Gaps = 36/189 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
                   +  ++  L +      K   T           L A   D N          +
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTADFNPNTDAVAYENL 674

Query: 366 QALHK-----------LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLV 413
           +A+ K             R++ + +D + I+ A  + + +++   +L+    +  IE   
Sbjct: 675 RAVDKYMTVKFNQLVATIRKAYEAYDFMAIYKAVVNFITVDLSAFYLDFAKDVVYIEA-- 732

Query: 414 QERLILLKM 422
               +  + 
Sbjct: 733 -ADNLARRQ 740


>gi|322388914|ref|ZP_08062506.1| isoleucine--tRNA ligase [Streptococcus infantis ATCC 700779]
 gi|321140297|gb|EFX35810.1| isoleucine--tRNA ligase [Streptococcus infantis ATCC 700779]
          Length = 930

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS---AIQAL 368
                   +  ++  L++      K   T           L A  +D N      A + L
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFNPAEDSVAYEEL 674

Query: 369 H--------------KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                          K  R++  + + L I+ A  + + +++   +L+
Sbjct: 675 RSVDKYMTIRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|289208948|ref|YP_003461014.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288944579|gb|ADC72278.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 678

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A    A     +A ++ H GFL + G+KMSKS G FI   + L+
Sbjct: 290 HFIGKDIAYFHTLFWPAMLHGAGFRTPSA-VFCH-GFLTVNGQKMSKSRGTFIRARDYLD 347

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R  +
Sbjct: 348 -------HLNPESLRYYL 358


>gi|256822588|ref|YP_003146551.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
 gi|256796127|gb|ACV26783.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
          Length = 588

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           GP V    H+G+ R  I+ D L R+ R+   +
Sbjct: 123 GPNVAKSMHVGHLRTAIIGDSLQRIFRFKGYQ 154


>gi|255657212|ref|ZP_05402621.1| valyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296451948|ref|ZP_06893663.1| valine--tRNA ligase [Clostridium difficile NAP08]
 gi|296259139|gb|EFH06019.1| valine--tRNA ligase [Clostridium difficile NAP08]
          Length = 888

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +   ++ +H    + +GRKMSKS GN I   E++E        + A  +R  +   + 
Sbjct: 507 NEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIE-------QYGADALRFTLTTGN- 558

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSA--I 365
             P   + F ++R+  A    +K    S        + II      ++  DL       I
Sbjct: 559 -SPGNDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNMTRESVKEDLTLADKWII 617

Query: 366 QALHKLARESTKNHDLLPIFNASAHI 391
              + + +E+T N D   +  A   I
Sbjct: 618 SRANNIVKEATNNMDKFDLGIALQKI 643


>gi|203284557|ref|YP_002222297.1| lysyl-tRNA synthetase [Borrelia duttonii Ly]
 gi|201084000|gb|ACH93591.1| lysyl-tRNA synthetase [Borrelia duttonii Ly]
          Length = 532

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 23/124 (18%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV-----------RNITDID--DK 78
           G T     HIGN R +I  D++ R L+    +    Y            +N+ D +    
Sbjct: 40  GITPSGTVHIGNFREVISVDLVARALQDQGKQVRFIYSWDNYDVFRKVPKNMPDQELLTT 99

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
            + +A    P    N +       N  +F +    +              I Q +  + +
Sbjct: 100 YLRQAITRVPDTKTNKS--SYARANEIEFEQHLPTVGIEP--------EFIDQSLKYMSS 149

Query: 139 IILH 142
              +
Sbjct: 150 DYAN 153


>gi|167854961|ref|ZP_02477736.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755]
 gi|167853918|gb|EDS25157.1| methionyl-tRNA synthetase [Haemophilus parasuis 29755]
          Length = 684

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N++ H G++ ++G+KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLEGSEYRKPT-NVFAH-GYVTVDGQKMSKSRGTFIQASTYL- 346

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                 +      +R       Y   ++    R+ + +  L  + Q   S 
Sbjct: 347 ------KHIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNSD 383


>gi|158523225|ref|YP_001531095.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|226701375|sp|A9A099|SYR_DESOH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|158512051|gb|ABW69018.1| arginyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 556

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 7/50 (14%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
            MS  +G F+T+ E+            A   R   L  HY  P+DF ++ 
Sbjct: 379 SMSTRSGEFVTLKEVTNEVG-------ADAARFIFLSRHYDSPLDFDLEL 421



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 36/103 (34%), Gaps = 16/103 (15%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           R   EF + +P+       GP      H+G+ R   V D + R+L +   +    Y  N 
Sbjct: 121 RVQVEFVSANPT-------GP-----LHVGHGRGAAVGDSVARILAFCGWQVHREYYVN- 167

Query: 73  TDIDDKIIERARQEHPSIPI--NDAISIITSKNTQQFVKDTTR 113
            D  ++I+   R            A+          +++   R
Sbjct: 168 -DAGNQILTLGRSVLLRWRELSGQAVDFPEDCYQGDYIRSIAR 209


>gi|87162044|ref|YP_493176.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|161508736|ref|YP_001574395.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294850349|ref|ZP_06791082.1| metS [Staphylococcus aureus A9754]
 gi|87128018|gb|ABD22532.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|160367545|gb|ABX28516.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|294822773|gb|EFG39209.1| metS [Staphylococcus aureus A9754]
 gi|315196171|gb|EFU26527.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           CGS01]
 gi|320144201|gb|EFW35969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
          Length = 657

 Score = 39.8 bits (92), Expect = 0.86,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKSGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|148658611|ref|YP_001278816.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
 gi|189083142|sp|A5V1W3|SYL_ROSS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148570721|gb|ABQ92866.1| leucyl-tRNA synthetase [Roseiflexus sp. RS-1]
          Length = 904

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 41/162 (25%), Gaps = 24/162 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      HIG+ +  ++ D L R                  D+       A     E+ +
Sbjct: 49  PYPSGDLHIGHLKNYVIGDALTRYYVIRGY-----------DVLHPFGWDAFGLPAENAA 97

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHA 145
           I         T  N  +  K       +        T   P      Q     +   G A
Sbjct: 98  IKYGRHPREWTYSNIAESKKSLEIAGIMY-DWSREVTTCNPDYYRWNQWLFLLLYRKGLA 156

Query: 146 YEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           Y A   +              +  ++D +    R   K  K+
Sbjct: 157 YRAKATVNWDPVDQT----VLANEQVDAEGRSWRSGAKVEKR 194


>gi|325957912|ref|YP_004289378.1| isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325329344|gb|ADZ08406.1| Isoleucyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 1060

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 12/77 (15%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
           +       + +H   L+ EG+KMSKS GN +   E++E        + A V+R  +L  +
Sbjct: 588 NDSTPYKKVLMHGFTLDEEGKKMSKSLGNVVEPEEVIEL-------YGADVLRFYLLWGN 640

Query: 316 YREPID---FTVQRLTE 329
             +P +   F    L  
Sbjct: 641 --KPWEDLKFVWDELKN 655


>gi|291522369|emb|CBK80662.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Coprococcus catus GD/7]
          Length = 799

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 50/152 (32%), Gaps = 23/152 (15%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAML 312
             +  E  A        L  +G KMSKS GN +   ++ +        + A  +R   + 
Sbjct: 556 VVNTPEPYAKRSAQGLILGPDGTKMSKSKGNVVDPLDVAD-------KYGADTLRTYILF 608

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVLSAL---YNDL----- 359
           M  Y     +    +   +  L +  +     T  +   +D  +  A+    +D+     
Sbjct: 609 MGDYGASTPWNENSVRGCKRFLDRVYRIFEKVTDENLHSLDNPLHKAIKKVSDDIEDMKY 668

Query: 360 NTVSA--IQALHKLARESTKNHDLLPIFNASA 389
           NT  A  +  L+     +T   +    F    
Sbjct: 669 NTAIATLMALLNDFESATTVGKEQYVTFLKLL 700


>gi|260549055|ref|ZP_05823276.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260407783|gb|EEX01255.1| leucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 874

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 52/157 (33%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +   +   ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVASFLEKGNAATAIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   S K     ++D+     A   +L +  
Sbjct: 744 IAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA 780


>gi|255308304|ref|ZP_05352475.1| valyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 888

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +   ++ +H    + +GRKMSKS GN I   E++E        + A  +R  +   + 
Sbjct: 507 NEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIE-------QYGADALRFTLTTGN- 558

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSA--I 365
             P   + F ++R+  A    +K    S        + II      ++  DL       I
Sbjct: 559 -SPGNDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNMTRESVKEDLTLADKWII 617

Query: 366 QALHKLARESTKNHDLLPIFNASAHI 391
              + + +E+T N D   +  A   I
Sbjct: 618 SRANNIVKEATNNMDKFDLGIALQKI 643


>gi|219870418|ref|YP_002474793.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165]
 gi|254782867|sp|B8F3E3|SYM_HAEPS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|219690622|gb|ACL31845.1| methionyl-tRNA synthetase [Haemophilus parasuis SH0165]
          Length = 684

 Score = 39.8 bits (92), Expect = 0.88,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N++ H G++ ++G+KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLEGSEYRKPT-NVFAH-GYVTVDGQKMSKSRGTFIQASTYL- 346

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                 +      +R       Y   ++    R+ + +  L  + Q   S 
Sbjct: 347 ------KHIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNSD 383


>gi|330984016|gb|EGH82119.1| hypothetical protein PLA107_03204 [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 409

 Score = 39.8 bits (92), Expect = 0.89,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 27/115 (23%)

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNT-------------VSAIQALHKLARESTKN 378
           ILL   P        +  A L AL++D+ T               A   L K  RE  K 
Sbjct: 7   ILLEALPNREPLTEEL--ARLEALFDDMQTNLPKGPKAPRTKAAEASARLLKAQRELLKV 64

Query: 379 HDLLPIF-NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                        +LG++   +      ++AI ++++ R          ++DY R
Sbjct: 65  ETKRQQLVTTFDEMLGLDFVSQE----DALAINEVIEMRKQA-------TSDYYR 108


>gi|325971031|ref|YP_004247222.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
 gi|324026269|gb|ADY13028.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
          Length = 741

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 11/110 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P V +  H+GN   ++  DV  R  R    E    Y+    +       RA +E      
Sbjct: 14  PYVNNIPHLGNLTQVLSADVFARFCRSKGYE--TLYICGTDEYGTATETRALKE------ 65

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
             +   +  +      +D      +A  +  R +   P+   ++Q+I   
Sbjct: 66  GVSPRELCDRYHAI-HRDIYAWFNIAFDYFGRTST--PEQTKIVQDIFTK 112


>gi|241765029|ref|ZP_04763024.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN]
 gi|241365387|gb|EER60186.1| arginyl-tRNA synthetase [Acidovorax delafieldii 2AN]
          Length = 561

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 55/342 (16%), Positives = 104/342 (30%), Gaps = 66/342 (19%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           R + EF + +P+       GP      H+G+ R   + D +  L      +    +  N 
Sbjct: 120 RVLVEFVSANPT-------GP-----LHVGHGRQAALGDAISHLFDTQGWDVYREFYYND 167

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-----CLAPTHQPRATN 127
             +    +  + Q               +     ++ D            +   +  A+ 
Sbjct: 168 AGVQIATLATSTQMRARGFKPGDAEWPEAAYNGDYIADIAADFLAKKTVRSDDREFTASG 227

Query: 128 HIPQMIYLIQNIILHGHAY-EANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
            +      +  + L   AY     ++    FD      Y   S     +     +     
Sbjct: 228 DVND----LDGMRLFAVAYLRHEQDLDLKAFDVRFDNYYLESSLYTSGKVDAVVQKLRDA 283

Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPG---------WHIECSAMSSHYLGKVFDIH 234
            K    D  LW +ST      +    +G  G         +HI           KV +I 
Sbjct: 284 GKTYEHDGALWLKSTEYGDDKDRVMRKGDGGYTYFVPDVAYHI---TKWERGFTKVVNIQ 340

Query: 235 GGGLDLIFPHHENEIA------QSCCADRIEKTANIWIHNGFLNL----EGRKMSKSNGN 284
           G        HH   IA      Q+      +   +  +H   + +    E  K+SK  G+
Sbjct: 341 GTD------HH-GTIARVRAGLQAAGVGIPQGYPDYVLHT-MVRVVRGGEEVKISKRAGS 392

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREP-IDFTVQ 325
           ++T+ +L+E             +R  +L    R+P  ++T  
Sbjct: 393 YVTLRDLIEWT-------SKDAVRFFLLS---RKPDTEYTFD 424


>gi|258516479|ref|YP_003192701.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257780184|gb|ACV64078.1| valyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 881

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               ++IH   L+  GRKMSKS GN I   +L+E+         A  +R  ++  +   P
Sbjct: 509 PFREVFIHGLVLDALGRKMSKSLGNGIDPIDLIESHG-------ADSLRFMLVTGN--TP 559

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +RL  A    +K    S 
Sbjct: 560 GNDLRFHFERLDGARNFANKLWNASR 585


>gi|256825648|ref|YP_003149608.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256689041|gb|ACV06843.1| arginyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 547

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 66/389 (16%), Positives = 135/389 (34%), Gaps = 53/389 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     H+G+ R   + D + RLL     +    Y  N     +      ++  A+ E 
Sbjct: 131 PT--GHLHVGHTRWAALGDSMRRLLAASGADVTAEYYINDAGAQMDKFGASVLAAAKGEP 188

Query: 88  PSI--PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                   + +  + +   +Q   D   L         R   + P M+  I++ +    A
Sbjct: 189 TPEGGYPGEYVQELGAAALEQ-RPDLAELPQDEAVTAARELGY-PMMLQQIKDTLD---A 243

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           +  + ++ F  +S+ + G    + ++  +    V E+          +W R+T      +
Sbjct: 244 FGVHFDVWFSEASLHSSG-LVEKAVERLREQGHVYEEGG-------AVWLRTTDFTDDKD 295

Query: 206 SPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHH--ENEIAQSCCADRIE 259
                  G P +    +A       + F   I+  G D    HH   N +     A   +
Sbjct: 296 RVLVRANGEPTYFASDAAYYLSKKDRGFTEKIYLLGAD----HHGYVNRLKAISAAAGDD 351

Query: 260 KTANIWIHNGFL-NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              +I I  G L ++ G ++SK  GN + + ++LE          A  IR ++       
Sbjct: 352 PAKDIEIRIGQLISINGARLSKRAGNVVDLRDMLEWIG-------ADAIRYSLGRYPADT 404

Query: 319 PIDFTVQRLTE------------AEILLSKWPQTSTSKGIIDPA-VLSALYNDLNTVSAI 365
           P++   + L +            A    +   + + + G+        +L ND    + +
Sbjct: 405 PLELDGEELRKQTNDNPVFYVQYAHARTANVARLAAADGVSRAEGFDPSLLNDPTEATLL 464

Query: 366 QALHKLARESTKNHDLLPIFNASAHILGI 394
            AL    R   +  +L      + ++ G+
Sbjct: 465 AALGDFPRVVAQAAELREPHRVARYLEGL 493


>gi|254429828|ref|ZP_05043535.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881]
 gi|196195997|gb|EDX90956.1| methionyl-tRNA synthetase [Alcanivorax sp. DG881]
          Length = 684

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 60/167 (35%), Gaps = 17/167 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A    A   + TA I+ H GF+ + G KMSKS G FI     L+
Sbjct: 296 HFIGKDIINFHGLFWPAMLDGAGLRKPTA-IYSH-GFVTVNGAKMSKSRGTFIKARTYLD 353

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEI--LLSKWPQTSTSKGII 347
                        +R      L +  R +  D  ++   +     L+ K    ++  G  
Sbjct: 354 -------HLSPEYLRYYFAAKLSS--RVDDFDLNLEDFAQRVNSDLVGKLVNIASRTGNF 404

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
                  L  DL+ +  ++ + +        ++      A   I+ +
Sbjct: 405 VKKFGGTLSTDLDNMMLVREVQEAGPRIADFYEKREFGKAMREIMAL 451


>gi|157803821|ref|YP_001492370.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166231639|sp|A8EZ02|SYL_RICCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157785084|gb|ABV73585.1| leucyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 834

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 44/101 (43%), Gaps = 20/101 (19%)

Query: 263 NIWIH--NGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYR 317
           N + H  +G L ++G   KMSKS  N I +  +        + + A  IRL +L  +   
Sbjct: 584 NKFFHKKSGNLVVQGRIEKMSKSKKNLIDLETM-------QKQYGADAIRLFVLSDSPPE 636

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
           + ++++V  L      ++K              V+++L +D
Sbjct: 637 KDLEWSVSGLEGCSRFINKLEHMFK--------VIASLKDD 669


>gi|30316172|sp|Q8TT52|SYE_METAC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
          Length = 571

 Score = 39.8 bits (92), Expect = 0.90,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 42/140 (30%), Gaps = 32/140 (22%)

Query: 14  KITE---FQAID---PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           K       + ++   P  + M    P       +G+AR M+V          Y       
Sbjct: 86  KKEPEKGLKPLEGAEPGKVVM-RFAPNPNGPGTLGSARGMVV-------NSEYVKMYKGK 137

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +V    D D  I        P +   D            ++ D   L  + P     A++
Sbjct: 138 FVLRFDDTDPDIKR------PMLEAYDW-----------YLDDFKWLGVV-PDRVVYASD 179

Query: 128 HIPQMIYLIQNIILHGHAYE 147
           H P      + +I  G AY 
Sbjct: 180 HFPIYYDYARKLIEMGKAYV 199


>gi|260767651|ref|ZP_05876586.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617160|gb|EEX42344.1| arginyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 577

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER-ARQEHPSIP 91
           P V    H+G+ R  I+ D + R L +      V    +I D   +     A  E     
Sbjct: 122 PNVAKEMHVGHLRSTIIGDAVVRTLEFLG--HKVIRANHIGDWGTQFGMLIANLERVQQE 179

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
             +    ++    + F +++ +L         RA N++
Sbjct: 180 SGEVSMELSD--LEAFYRESKKLYDEDAEFAERARNYV 215


>gi|255102404|ref|ZP_05331381.1| valyl-tRNA synthetase [Clostridium difficile QCD-63q42]
          Length = 888

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +   ++ +H    + +GRKMSKS GN I   E++E        + A  +R  +   + 
Sbjct: 507 NEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIE-------QYGADALRFTLTTGN- 558

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSA--I 365
             P   + F ++R+  A    +K    S        + II      ++  DL       I
Sbjct: 559 -SPGNDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNMTRESVKEDLTLADKWII 617

Query: 366 QALHKLARESTKNHDLLPIFNASAHI 391
              + + +E+T N D   +  A   I
Sbjct: 618 SRANNIVKEATNNMDKFDLGIALQKI 643


>gi|254976852|ref|ZP_05273324.1| valyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094239|ref|ZP_05323717.1| valyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255315992|ref|ZP_05357575.1| valyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518649|ref|ZP_05386325.1| valyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255651771|ref|ZP_05398673.1| valyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260684797|ref|YP_003216082.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688455|ref|YP_003219589.1| valyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260210960|emb|CBA66224.1| valyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214472|emb|CBE06944.1| valyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 888

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +   ++ +H    + +GRKMSKS GN I   E++E        + A  +R  +   + 
Sbjct: 507 NEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIE-------QYGADALRFTLTTGN- 558

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSA--I 365
             P   + F ++R+  A    +K    S        + II      ++  DL       I
Sbjct: 559 -SPGNDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNMTRESVKEDLTLADKWII 617

Query: 366 QALHKLARESTKNHDLLPIFNASAHI 391
              + + +E+T N D   +  A   I
Sbjct: 618 SRANNIVKEATNNMDKFDLGIALQKI 643


>gi|94311701|ref|YP_584911.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34]
 gi|122987861|sp|Q1LJN4|SYM_RALME RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|93355553|gb|ABF09642.1| methionyl-tRNA synthetase [Cupriavidus metallidurans CH34]
          Length = 690

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT      
Sbjct: 294 HFIGKDILYFHTLFWPAMLR-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQ---- 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
              +         +R           ++ +++ L 
Sbjct: 348 --SYTDTGMNPEWLRYYFAAK-----LNASMEDLD 375


>gi|307353953|ref|YP_003895004.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307157186|gb|ADN36566.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 922

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 43/121 (35%), Gaps = 10/121 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            +D      DLI  H   ++         E      +  G   LEG KMS S GN I + 
Sbjct: 556 PYDFRFSAKDLISNHLTFQLFHHKALFPKELQPRGMVVFGMGLLEGAKMSSSKGNVILLE 615

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           + +E          A  +R+ ++ +   + +  D+  + ++     + ++          
Sbjct: 616 DAVEEVG-------ADTVRMFLVGSAEPW-QDFDWRRELVSSTRKQIERFINNVEDSLEA 667

Query: 348 D 348
           D
Sbjct: 668 D 668



 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
          P      H+G+ R  IV DV+ R  R            ++T
Sbjct: 33 PYPSGAMHVGHGRTYIVPDVIARYYRMRGKHVLFPMAFHVT 73


>gi|157692223|ref|YP_001486685.1| isoleucyl-tRNA synthetase [Bacillus pumilus SAFR-032]
 gi|157680981|gb|ABV62125.1| isoleucine--tRNA ligase [Bacillus pumilus SAFR-032]
          Length = 921

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 40/106 (37%), Gaps = 11/106 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN I   ++        +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTIDPTKV-------AKQLGAEILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLS 353
              +Y+     +   L +   +  K   T      +    DPAV +
Sbjct: 622 SSVNYQADHPVSDDILKQVAEVYRKIRNTFRFLHGNLFDFDPAVNA 667


>gi|145590523|ref|YP_001152525.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166231633|sp|A4WHK6|SYL_PYRAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145282291|gb|ABP49873.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 945

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
                D    G DLI  H    I         EK     + NG++  EG KMSKS  N +
Sbjct: 588 FWYPLDSRNSGKDLIPNHLTFFIFNHVAIFPREKWPRQIVANGWVLREGEKMSKSKRNVL 647

Query: 287 TINELLETKKFGGRSWPAPVIR 308
            +++ +E        +    +R
Sbjct: 648 PLDKAVEM-------YGPDPLR 662



 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 14/29 (48%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          P      HIG+ R  ++ DVL R  R+  
Sbjct: 43 PYPNGAIHIGHGRTYLIADVLARFHRHLG 71


>gi|126307099|ref|XP_001375630.1| PREDICTED: similar to putative utrophin [Monodelphis domestica]
          Length = 1017

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 37/92 (40%), Gaps = 2/92 (2%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIR 308
            S    +      + +H   +  +G KMSKS GN I+ + ++   +   +   +   ++R
Sbjct: 643 ISVATRKKAPFKTVLVHGFTVGEKGEKMSKSLGNVISPDFVINGGEDLSKDPPYGVDILR 702

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             +  ++    +    + L  A   ++K   T
Sbjct: 703 WWIAESNIFNEVKIGPRILNAARDDINKLRNT 734


>gi|126700875|ref|YP_001089772.1| valyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252312|emb|CAJ70153.1| valyl-tRNA synthetase [Clostridium difficile]
          Length = 888

 Score = 39.8 bits (92), Expect = 0.91,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +   ++ +H    + +GRKMSKS GN I   E++E        + A  +R  +   + 
Sbjct: 507 NEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIE-------QYGADALRFTLTTGN- 558

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSA--I 365
             P   + F ++R+  A    +K    S        + II      ++  DL       I
Sbjct: 559 -SPENDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNMTRESVKEDLTLADKWII 617

Query: 366 QALHKLARESTKNHDLLPIFNASAHI 391
              + + +E+T N D   +  A   I
Sbjct: 618 SRANNIVKEATNNMDKFDLGIALQKI 643


>gi|332687559|emb|CBZ41220.1| mitochondrial leucyl-tRNA synthetase [Saccharomyces uvarum]
          Length = 895

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 26/156 (16%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           HIG+ R  ++ D L R  +               D+   +   A     E+ +I      
Sbjct: 64  HIGHLRVYVISDSLNRFYKQKGY-----------DVIHPMGWDAFGLPAENAAIERRINP 112

Query: 97  SIITSKNTQQFVKDTTR-LACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNE 151
           +I T +N  +  +     LA      +  AT   P+     Q     +  +G AY    E
Sbjct: 113 AIWTRENISKMKQQMESMLANFDWDREI-AT-CDPEYYKFTQWIFLELFKNGLAYRKEAE 170

Query: 152 I-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           I              +  ++D Q    R      KK
Sbjct: 171 INWDPVDKT----VLANEQVDAQGRSWRSGAIVEKK 202


>gi|332687555|emb|CBZ41218.1| mitochondrial leucyl-tRNA synthetase [Saccharomyces bayanus]
 gi|332687557|emb|CBZ41219.1| mitochondrial leucyl-tRNA synthetase [Saccharomyces bayanus]
          Length = 895

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 49/156 (31%), Gaps = 26/156 (16%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           HIG+ R  ++ D L R  +               D+   +   A     E+ +I      
Sbjct: 64  HIGHLRVYVISDSLNRFYKQKGY-----------DVIHPMGWDAFGLPAENAAIERRINP 112

Query: 97  SIITSKNTQQFVKDTTR-LACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNE 151
           +I T +N  +  +     LA      +  AT   P+     Q     +  +G AY    E
Sbjct: 113 AIWTRENISKMKQQMESMLANFDWDREI-AT-CDPEYYKFTQWIFLELFKNGLAYRKEAE 170

Query: 152 I-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
           I              +  ++D Q    R      KK
Sbjct: 171 INWDPVDKT----VLANEQVDAQGRSWRSGAIVEKK 202


>gi|307595328|ref|YP_003901645.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
 gi|307550529|gb|ADN50594.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
          Length = 643

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 19/92 (20%)

Query: 255 ADRIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGRS-----WPAP-- 305
           A    + A   IH     +NL G KMS   G +++++ELL   K          +P    
Sbjct: 427 AMGYHELARKLIHYSYEMVNLAGMKMSGRKGIYVSLDELLNEAKDRVMEIVKGRFPPDEA 486

Query: 306 ----------VIRLAMLMTHYREPIDFTVQRL 327
                      IR + L     +P+ F+  ++
Sbjct: 487 DKVAEAVAVGAIRYSFLSVSPNKPLTFSWDKV 518



 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
             HIG+ R  ++ D L RLLR+      V +  N  D  D++
Sbjct: 130 PMHIGHGRNAVLGDSLARLLRFCGASVKVHFYVN--DCGDQM 169


>gi|229099491|ref|ZP_04230419.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
 gi|228683787|gb|EEL37737.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
          Length = 544

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPITIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE  ++        I  K  ++F +    L         R  + +  + +  +   ++  
Sbjct: 60  QEGVTVV------EIADKYHEEFERCFHSLGFTY-DCYTRTDSEYHHETVQKVFLRLLEE 112

Query: 143 GHAY 146
           G+ Y
Sbjct: 113 GYIY 116


>gi|224418440|ref|ZP_03656446.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253827756|ref|ZP_04870641.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313141971|ref|ZP_07804164.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|253511162|gb|EES89821.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
 gi|313131002|gb|EFR48619.1| valyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 879

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 10/84 (11%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL--AMLMTHYR 317
              +I++H    +  G+KMSKS GN I   EL+E        + A V+R   A+L    R
Sbjct: 518 PFPDIYLHALVRDENGQKMSKSKGNVIDPLELIE-------KYSADVLRFTLAILCAQGR 570

Query: 318 EPIDFTVQRLTEAEILLSKWPQTS 341
             +  +  +L  ++   +K    S
Sbjct: 571 -DVKLSNNQLEISKNFTNKLYNAS 593


>gi|209523554|ref|ZP_03272108.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
 gi|209495959|gb|EDZ96260.1| isoleucyl-tRNA synthetase [Arthrospira maxima CS-328]
          Length = 697

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S     I     +  H   L+ +G KMSKS GN +    +
Sbjct: 568 DIYLEGSDQHRGWFQSSLLTSVANHGIAPYKTVLTHGFVLDEKGYKMSKSLGNVVDPAVV 627

Query: 292 LETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +   K   +  ++ A ++RL +    Y   +      L +   +  K   T+ 
Sbjct: 628 INGGKNQQQDPAYGADILRLWVSSVDYSADVPLGKNILKQMSDVYRKIRNTAR 680


>gi|225550367|ref|ZP_03771316.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
 gi|225379521|gb|EEH01883.1| valine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
           27814]
          Length = 874

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 52/149 (34%), Gaps = 31/149 (20%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
                ++ IH    + +G+KMSKS GN I   +++         +    +RL        
Sbjct: 504 KRPFKDVLIHGLIRDAQGKKMSKSLGNGIDPFDIIN-------EYGLDTMRLFFAS---- 552

Query: 318 EP-----IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA-------- 364
                  ++F+ +RL      L+K    +     +D      +    +  +         
Sbjct: 553 STTVGEDLNFSTERLGANWNYLNKIWNIAKYIENLDE-----INESFSIQNVHEFCDVNK 607

Query: 365 --IQALHKLARESTKNHDLLPIFNASAHI 391
             I  L KL+ E  KN D   +  A+  +
Sbjct: 608 WIIAELSKLSVEMNKNMDKYNLVVATKDL 636


>gi|50365307|ref|YP_053732.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
 gi|60390693|sp|Q6F0X5|SYL_MESFL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|50363863|gb|AAT75848.1| leucyl-tRNA synthetase [Mesoplasma florum L1]
          Length = 801

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 58/172 (33%), Gaps = 31/172 (18%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       +            E    ++     L  +GRKMSKS G
Sbjct: 525 PVDLYVGGQEHAVGHLLYARFWNYVLYDLGITSVKEPFKQLFNQGMILGPDGRKMSKSWG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQ--T 340
           N I  ++++ T         A  +RL  M M      + ++   L  A   + +  +   
Sbjct: 585 NVINPDDIVSTHG-------ADSLRLYEMFMGPLDASLPWSEDGLDSALKWIHRAYRMVM 637

Query: 341 STSKGIIDPAVLSALYND-------------LNTVSAIQALHKLARESTKNH 379
           +T    ++   L  +YND              NT  AI  L        K+ 
Sbjct: 638 TTELTDVNDTKLDFVYNDVVKNVSEMIESLKFNT--AISQLMIFVNAVYKHE 687


>gi|148261042|ref|YP_001235169.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
 gi|189082979|sp|A5G068|SYL_ACICJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146402723|gb|ABQ31250.1| leucyl-tRNA synthetase [Acidiphilium cryptum JF-5]
          Length = 864

 Score = 39.8 bits (92), Expect = 0.92,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 11/120 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  R    +  V +              AR+       N   + 
Sbjct: 56  IHMGHVRNYAIGDVIARARRAQGYD--VLHPMGWDAFGLPAENAARER------NVDPAK 107

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            T  N      D  R+       +  AT    +      L  ++   G AY   + + +D
Sbjct: 108 WTRDNIAAMKADLKRVGLSVDWSREFATCDPEYYGHQQKLFLDLWRAGLAYRRESAVNWD 167


>gi|319790640|ref|YP_004152273.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317115142|gb|ADU97632.1| valyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 879

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 60/164 (36%), Gaps = 16/164 (9%)

Query: 195 KRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           K+   +   W S   W  G  GW  E   + + Y     D+   G D+IF      +   
Sbjct: 444 KQDEDVLDTWFSSALWPFGVFGWPDETDDLKAFY---PTDLLVTGFDIIFFWVARMMMMG 500

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM- 311
                    A++++H    + +G+KMSK+ GN I   E++E        + A  +R  + 
Sbjct: 501 YHFTGKRPFADVYVHALVRDEKGQKMSKTKGNVIDPLEMVE-------KYGADTLRFTLT 553

Query: 312 -LMTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLS 353
            L    R  I  + + +       +K W          D A + 
Sbjct: 554 ALAAQGR-DIRLSERIIEGYRHFANKVWNVARFVLNAADAAAVE 596


>gi|308173505|ref|YP_003920210.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|307606369|emb|CBI42740.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
 gi|328553563|gb|AEB24055.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
 gi|328911644|gb|AEB63240.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
          Length = 921

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+  GRKMSKS GN I   ++        +   A ++RL +
Sbjct: 569 AVAVTGQAPYKGVLSHGFTLDANGRKMSKSLGNTIDPTKI-------AKQLGAEILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
              +Y+     +   L +   +  K   T
Sbjct: 622 SSVNYQADHPVSEDILKQVAEVYRKVRNT 650


>gi|303238222|ref|ZP_07324758.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
 gi|302594268|gb|EFL63980.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
          Length = 176

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 26/76 (34%), Gaps = 8/76 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+   ++  D+L R  R      C  YV         I  RA +E        +   I
Sbjct: 17  HIGHIAALLPGDILARYFRLKGYNVC--YVSGSDCHGTPIQIRANKE------GVSPEQI 68

Query: 100 TSKNTQQFVKDTTRLA 115
            ++    F     +L 
Sbjct: 69  ANRYHNDFKGCFDKLG 84


>gi|296879657|ref|ZP_06903634.1| valine--tRNA ligase [Clostridium difficile NAP07]
 gi|296429370|gb|EFH15240.1| valine--tRNA ligase [Clostridium difficile NAP07]
          Length = 834

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 57/146 (39%), Gaps = 20/146 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +   ++ +H    + +GRKMSKS GN I   E++E        + A  +R  +   + 
Sbjct: 453 NEKPFDHVLVHGLVRDSQGRKMSKSLGNGIDPLEIIE-------QYGADALRFTLTTGN- 504

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSA--I 365
             P   + F ++R+  A    +K    S        + II      ++  DL       I
Sbjct: 505 -SPGNDMRFYMERVEFARNFANKLWNASRFVFMNIDEDIIKNMTRESVKEDLTLADKWII 563

Query: 366 QALHKLARESTKNHDLLPIFNASAHI 391
              + + +E+T N D   +  A   I
Sbjct: 564 SRANNIVKEATNNMDKFDLGIALQKI 589


>gi|203288091|ref|YP_002223106.1| lysyl-tRNA synthetase [Borrelia recurrentis A1]
 gi|201085311|gb|ACH94885.1| lysyl-tRNA synthetase [Borrelia recurrentis A1]
          Length = 532

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 39/124 (31%), Gaps = 23/124 (18%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV-----------RNITDID--DK 78
           G T     HIGN R +I  D++ R L+    +    Y            +N+ D +    
Sbjct: 40  GITPSGTVHIGNFREVISVDLVARALQDQGKQVRFIYSWDNYDVFRKVPKNMPDQELLTT 99

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
            + +A    P    N +       N  +F +    +              I Q +  + +
Sbjct: 100 YLRQAITRVPDTKTNKS--SYARANEIEFEQHLPTVGIEP--------EFIDQSLKYMSS 149

Query: 139 IILH 142
              +
Sbjct: 150 DYAN 153


>gi|157150179|ref|YP_001449984.1| isoleucyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|189082338|sp|A8AW24|SYI_STRGC RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157074973|gb|ABV09656.1| isoleucyl-tRNA synthetase [Streptococcus gordonii str. Challis
           substr. CH1]
          Length = 930

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS---AIQAL 368
                   +  ++  L++      K   T           L A  +D N      A + L
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFNPAEDTVAYEEL 674

Query: 369 H--------------KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                          K  R++  + + L I+ A  + + +++   +L+
Sbjct: 675 RSVDKYMTVRFNQLVKTIRDAYADFEFLTIYKALVNFINVDLSAFYLD 722


>gi|229543663|ref|ZP_04432723.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229328083|gb|EEN93758.1| valyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 881

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 48/130 (36%), Gaps = 10/130 (7%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +     Y     D    G D+IF      I Q           ++ IH    + 
Sbjct: 464 GWPDEEAKDYKRY--YPTDTLVTGYDIIFFWVSRMIFQGLAFTGKRPFKDVLIHGLVRDE 521

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEI 332
           +GRKMSKS GN +   E+++        + A  +R  +       + + F+ +++     
Sbjct: 522 QGRKMSKSLGNGVDPMEVID-------KYGADSLRYFLTTGSAPGQDLRFSYEKVEAVWN 574

Query: 333 LLSKWPQTST 342
             +K    S 
Sbjct: 575 FANKIWNASR 584


>gi|123443000|ref|YP_001006975.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|187653900|sp|A1JTX6|SYM_YERE8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122089961|emb|CAL12818.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 675

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A      +       A   I+ + ++   ++++  
Sbjct: 400 INKRFAGKLADHLADPALYKTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|94986673|ref|YP_594606.1| arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
 gi|123082175|sp|Q1MRU1|SYR_LAWIP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|94730922|emb|CAJ54285.1| Arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
          Length = 550

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 28/90 (31%), Gaps = 3/90 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D L RLLR+        Y  N      +++  +         
Sbjct: 127 PT--GPLHIGHGRGAAIGDTLARLLRFTGYNVTTEYYINDAGRQMQLLGLSIWLRIKELS 184

Query: 93  NDAISIITSKNTQQF-VKDTTRLACLAPTH 121
              ++         + ++    L    P  
Sbjct: 185 GIQVTWPEEYYKGTYIIEIAKALLEEQPDI 214


>gi|116198217|ref|XP_001224920.1| hypothetical protein CHGG_07264 [Chaetomium globosum CBS 148.51]
 gi|88178543|gb|EAQ86011.1| hypothetical protein CHGG_07264 [Chaetomium globosum CBS 148.51]
          Length = 987

 Score = 39.8 bits (92), Expect = 0.93,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 48/162 (29%), Gaps = 22/162 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + H+G+ R   + DV+ R          +       D      E A  E      
Sbjct: 100 PYPSGYLHLGHLRVYTIADVVARFHSLQGHNVLLPMGW---DAFGLPAENAAIER----- 151

Query: 93  NDAISIITSKNTQQFVKDTTRLA------CLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
               +I T +N  +  +    +       C   T  P    H  ++  L   +   G AY
Sbjct: 152 GINPAIWTKENIAKMKEQLGLMNGSWDWSCELSTCDPSFYKHTQKIFLL---LREQGLAY 208

Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           +A  E+              +  ++D      R   K  K+ 
Sbjct: 209 QAEAEVNYDPVDKT----VLANEQVDSNGCSWRSGAKVEKRK 246


>gi|326404441|ref|YP_004284523.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
 gi|325051303|dbj|BAJ81641.1| leucyl-tRNA synthetase [Acidiphilium multivorum AIU301]
          Length = 864

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 38/120 (31%), Gaps = 11/120 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  R    +  V +              AR+       N   + 
Sbjct: 56  IHMGHVRNYAIGDVIARARRAQGYD--VLHPMGWDAFGLPAENAARER------NVDPAK 107

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
            T  N      D  R+       +  AT    +      L  ++   G AY   + + +D
Sbjct: 108 WTRDNIAAMKADLKRVGLSVDWSREFATCDPEYYGHQQKLFLDLWRAGLAYRRESAVNWD 167


>gi|189485353|ref|YP_001956294.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287312|dbj|BAG13833.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 512

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 49/138 (35%), Gaps = 14/138 (10%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG++   I  D++ R  R    +        +T  D+     A+    +    +  
Sbjct: 14  DIPHIGHSYTTIASDIMARWKRLKGFDVFF-----LTGTDEH---GAKIVAAAKKKGEIP 65

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
             +  K + +F +    L     T   R T   H   +  ++  +   G  ++   E ++
Sbjct: 66  QKLCDKMSAKFKEAWELLNISY-TDFIRTTERKHFVSVEKILSILFDKGFIFKKKYEELY 124

Query: 155 DTSSIPNYGSFSRRKIDE 172
                  Y   +++ +DE
Sbjct: 125 CIGCERFY---AQKDLDE 139



 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH    D+++ H     A    A  +     ++ H GF  L G KMSKS GN ++  EL
Sbjct: 255 DIHLMAKDILWFHSVIWPAILMGA-GLPLPKKLYSH-GFFTLNGNKMSKSLGNVVSPREL 312

Query: 292 LETKKFGGRSWPAPVI 307
           ++        + A  I
Sbjct: 313 VDKYGVDAARYLAATI 328


>gi|169829674|ref|YP_001699832.1| leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|238688206|sp|B1HXY7|SYL_LYSSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|168994162|gb|ACA41702.1| Leucyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 805

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 41/124 (33%), Gaps = 14/124 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E+         +  +RL  M M      + ++   L  A   L +  +   
Sbjct: 583 NVVNPDEIIESHG-------SDTLRLYEMFMGPLEASVAWSTNGLDGARRFLDRIWRLLV 635

Query: 343 SKGI 346
           ++  
Sbjct: 636 NEED 639


>gi|85058781|ref|YP_454483.1| leucyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
 gi|123738978|sp|Q2NUU7|SYL_SODGM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|84779301|dbj|BAE74078.1| leucyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
          Length = 860

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 48/153 (31%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             +     KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVYAGMSKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYND----------------------- 358
             +  A   L +  + +     +G +    + AL ++                       
Sbjct: 661 SGVEGANRFLKRVWKLAYEHPQQGPVGALDIDALNDEQKALRREVHKTIAKVTDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  +  +         A   
Sbjct: 721 TFNT--AIAAIMELMNKLARAPQQTGQDRALLQ 751


>gi|315635076|ref|ZP_07890356.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
 gi|315476197|gb|EFU66949.1| leucine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
          Length = 862

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 43/154 (27%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  ++    KMSKS  N I   E++E        + A  +RL M+      P    +++ 
Sbjct: 610 HELVHAGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQ 659

Query: 324 VQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSA--------------LYND---- 358
              +  A+  L++       + +  T   +   A+ SA              + +D    
Sbjct: 660 ESGVEGAKRFLARVWNLVFEYSKHPTKAAVNPTALSSAQKALRRDVHKTIAKVSDDIGRR 719

Query: 359 --LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
              NT  AI A+ +L  + T+         A   
Sbjct: 720 QTFNT--AIAAIMELMNKLTRAPLDDEQDRAVMA 751


>gi|315179517|gb|ADT86431.1| arginyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 577

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 5/98 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER-ARQEHPSIP 91
           P V    H+G+ R  I+ D + R L +      V    +I D   +     A  E     
Sbjct: 122 PNVAKEMHVGHLRSTIIGDAVVRTLEFLG--HKVIRANHIGDWGTQFGMLIANLERVQQE 179

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
             +    ++    + F +++ +L         RA N++
Sbjct: 180 SGEVSMELSD--LEAFYRESKKLYDEDAEFAERARNYV 215


>gi|307151236|ref|YP_003886620.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
 gi|306981464|gb|ADN13345.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
          Length = 533

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 35/114 (30%), Gaps = 11/114 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ DV+ R  R          V  IT  D+      + +  +     
Sbjct: 20  VNDVPHIGSAYTTMIADVIARWKRLQGYS-----VMFITGTDEH---GQKIQRTAEAKGL 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
           A      +    F     +L         R T   H   +    Q +   G  Y
Sbjct: 72  APQEHCDQIVTSFESLWDKLNIHY-DRFSRTTAKPHQSIVKEFFQRVWDQGDIY 124


>gi|226943041|ref|YP_002798114.1| leucyl-tRNA synthetase [Azotobacter vinelandii DJ]
 gi|259511540|sp|C1DMV9|SYL_AZOVD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|226717968|gb|ACO77139.1| Leucyl-tRNA synthetase [Azotobacter vinelandii DJ]
          Length = 870

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 38/140 (27%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P     Y      Y     H+G+ R   + DV+ R  R           RN+       
Sbjct: 29  QPGKDTFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--------RNVLQPMGWD 80

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-- 137
                 E+ ++    A +  T +N          L  L        T   P      Q  
Sbjct: 81  AFGMPAENAAMKNRVAPAKWTYENIAYMKSQLKSLG-LGIDWSREVTTCKPDYYRWEQWL 139

Query: 138 --NIILHGHAYEANNEIIFD 155
              +   G  Y  N  + +D
Sbjct: 140 FTRLFEKGVIYRKNGTVNWD 159


>gi|261365368|ref|ZP_05978251.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566158|gb|EFC87718.1| isoleucine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 930

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 596 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 648

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 649 LKRVTESYRRIRNT 662


>gi|163791562|ref|ZP_02185965.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873167|gb|EDP67268.1| leucyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 805

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 66/194 (34%), Gaps = 22/194 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGGNNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  ++++E        + A  +R+  M M      I +    L  +   L + W    
Sbjct: 583 NVVNPDDVVE-------KFGADTLRMYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIM 635

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQAL-HKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
             +G +   + +  +ND      +  + H+  ++ T++ + L    A + ++        
Sbjct: 636 DEEGKVRDRITT--FND----GYLDVVYHQTVKKVTEDFEQLRFNTAISQMMVFVNEAYK 689

Query: 401 LNKNISIAIEKLVQ 414
            +      I+  VQ
Sbjct: 690 ADALPVDYIKSFVQ 703


>gi|153870999|ref|ZP_02000277.1| Signal transduction histidine kinase [Beggiatoa sp. PS]
 gi|152072537|gb|EDN69725.1| Signal transduction histidine kinase [Beggiatoa sp. PS]
          Length = 673

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 11/106 (10%)

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV-SAIQALHKLARES 375
           R+ I    + L+EA+ +     Q + +  I     L+ + ++L T  +AI    ++ RE 
Sbjct: 153 RQQI---EKALSEAKEIAEHARQEAETANITKSQFLANMSHELRTPLNAIIGYSEILRED 209

Query: 376 TKNH-------DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
            ++        DL  I  A  H+LG+      L+K  S  ++ L++
Sbjct: 210 AEDLEQEDFIPDLKKIDTAGRHLLGLINDVLDLSKIESGKMDLLIE 255


>gi|149928114|ref|ZP_01916361.1| leucyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149823200|gb|EDM82437.1| leucyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 881

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 59/157 (37%), Gaps = 27/157 (17%)

Query: 271 LNLEG-RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLT 328
           +++ G  KMSKS  N I    L++        + A   RL  M      + ++++   + 
Sbjct: 629 VHIGGVEKMSKSKNNGIDPQALID-------QYGADTARLFTMFAAPPEQSLEWSDSGVE 681

Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-------LHKLARESTKNHD- 380
            A   L +  Q + ++     A  +     LN     +A       +H++ +++  ++D 
Sbjct: 682 GAHRFLKRLYQLALNQQEAIKAQPA-----LNATELSKAAQNTRRDVHEILKQANFDYDR 736

Query: 381 -----LLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
                ++       + L     +     + ++ +E L
Sbjct: 737 HQYNTVVSAGMKMLNTLDAFANEPKSPADQAVLVEGL 773


>gi|71892244|ref|YP_277978.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
 gi|123747817|sp|Q492J8|SYM_BLOPB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71796350|gb|AAZ41101.1| methionyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
           str. BPEN]
          Length = 555

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 42/219 (19%), Positives = 72/219 (32%), Gaps = 36/219 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKT---ANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H  G D+I+ H               +     NI++H G + L G K+SKS G  I ++ 
Sbjct: 289 HFIGKDIIYFH----CLFWPAVLSGSQFRKPTNIFVH-GHVTLNGSKISKSKGTCINVST 343

Query: 291 LLETKKFGGRSWPAPVIRLAM---LMTHYRE-PIDFTVQRLTEAEILLSKWPQ-TSTSKG 345
            L              +R      L +H  +  ++ +         +++K     S + G
Sbjct: 344 YLSCLN-------PDYLRYYYATKLSSHANDIDLNLSDFITRVNSDIINKILNLASRNSG 396

Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHILGI-EVCKEHLNK 403
            I       L N L     I  +   +R           FN A   I+ + +    +++K
Sbjct: 397 FIHQYYNGHLSNTLTHPL-IYNMFIESRHYIGKLFQKREFNYAMREIMKLADEANRYIDK 455

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
           +    I K +  R   L              + S G  L
Sbjct: 456 HAPWHIAKKIDRRQEALS-------------IYSMGIQL 481


>gi|15612032|ref|NP_223684.1| methionyl-tRNA synthetase [Helicobacter pylori J99]
 gi|7388283|sp|Q9ZKG9|SYM_HELPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|4155547|gb|AAD06543.1| METHIONYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 656

 Score = 39.8 bits (92), Expect = 0.94,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKNQWDFFN-LDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAVSK 137


>gi|297170542|gb|ADI21570.1| isoleucyl-tRNA synthetase [uncultured verrucomicrobium
           HF0070_35E03]
          Length = 928

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +  +        I  H   ++ +GRK+SKS+G   T              + A V+RL +
Sbjct: 580 AMVSFGDAPYRRILTHGFVVDGDGRKISKSDGKPQT-------ADSYVTKYGADVLRLWV 632

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               +R  I  + + L +          T
Sbjct: 633 CSEDFRRDIPLSDEILGQVVRSYRTLRNT 661


>gi|311031449|ref|ZP_07709539.1| valyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 882

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 55/162 (33%), Gaps = 25/162 (15%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ IH    + +GRKMSKS GN +   E++E  
Sbjct: 484 TGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGVDPMEVIE-- 541

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
                 + A  +R  +       P   + F+ +++       +K    S          L
Sbjct: 542 -----KYGADSLRYFLSTGS--SPGQDLRFSYEKVESTWNFANKIWNASR-------FAL 587

Query: 353 SALYN----DLNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             + +    D++         K     T+ ++ +      A 
Sbjct: 588 MNMDDMKFEDIDLSGEKSVADKWI--LTRLNETIETVTKLAE 627


>gi|257464816|ref|ZP_05629187.1| leucyl-tRNA synthetase [Actinobacillus minor 202]
 gi|257450476|gb|EEV24519.1| leucyl-tRNA synthetase [Actinobacillus minor 202]
          Length = 862

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 50/153 (32%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPAV---------------LSALYND----- 358
             +  A+  L +          + +   +D                  ++ + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYAQNPATAALDVNALSKAQKDLRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKAPLETEQDRAVMA 751


>gi|257440904|ref|ZP_05616659.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
 gi|257196684|gb|EEU94968.1| valine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
          Length = 901

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 25/150 (16%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML- 312
                     + IH    + +GRKMSKS GN I   E++         + A  +R  +L 
Sbjct: 526 AYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIA-------QYGADALRFMLLD 578

Query: 313 -MTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVLSALYNDLNT 361
             T     + ++ +++  A    +K    +             G+ + + L  + +    
Sbjct: 579 GSTP-GNDMRYSEKKVEAARNFANKLWNATRFVLMNLPEDFQPGLPEESKLD-MSDK--- 633

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHI 391
              +  L+++A   T N D   +  A+A I
Sbjct: 634 -WVLTKLNQVAGAMTDNLDHFEMGLAAAKI 662


>gi|229087021|ref|ZP_04219175.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
 gi|228696284|gb|EEL49115.1| Valyl-tRNA synthetase [Bacillus cereus Rock3-44]
          Length = 881

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 15/127 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      I Q           ++ IH    + +GRKMSKS GN I   E+
Sbjct: 481 DALVTGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGIDPMEV 540

Query: 292 LETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
           +E        + A  +R  +       + + F+++++      ++K    S         
Sbjct: 541 IE-------KYGADAMRFFLSTGSAPGQDLRFSMEKVESTWNFINKIWNASR-------F 586

Query: 351 VLSALYN 357
           VL  + +
Sbjct: 587 VLMNMDD 593


>gi|194014535|ref|ZP_03053152.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
 gi|194013561|gb|EDW23126.1| isoleucyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
          Length = 921

 Score = 39.8 bits (92), Expect = 0.95,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 34/89 (38%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN I   ++        +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFTLDKEGRKMSKSLGNTIDPTKV-------AKQLGAEILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
              +Y+     +   L +   +  K   T
Sbjct: 622 SSVNYQADHPVSDDILKQVAEVYRKIRNT 650


>gi|326804011|ref|YP_004321829.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326650118|gb|AEA00301.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 666

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 48/151 (31%), Gaps = 23/151 (15%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           +      F          YV  P  Y     HIGN+   I  D + R  R    E  V +
Sbjct: 1   MTNTKEPF----------YVTTPIYYPSGQLHIGNSYSTIAADTIARYKRLMGHE--VFF 48

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN- 127
           +    +   KI ++A +E        +      +  +   K    L         R T+ 
Sbjct: 49  LTGADEHGLKIQQKAEEE------GISPKAYVDRMAEGMQKLWKSLDISN-DKFIRTTDD 101

Query: 128 -HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            H+  +  + + ++  G  Y    E  +  S
Sbjct: 102 YHVKAVQDIFEQLLDQGDIYLGEYEGWYSVS 132


>gi|313637568|gb|EFS02978.1| leucyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 803

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +R+  M M   
Sbjct: 556 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRMYEMFMGPL 608

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  +   L + W    T +G +   V
Sbjct: 609 EASIAWNENGLEGSRKFLDRIWRLLVTEEGTLAEKV 644


>gi|313632954|gb|EFR99884.1| leucyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 806

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +R+  M M   
Sbjct: 559 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRMYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  +   L + W    T +G +   V
Sbjct: 612 EASIAWNENGLEGSRKFLDRIWRLLVTEEGTLAEKV 647


>gi|261253533|ref|ZP_05946106.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
 gi|260936924|gb|EEX92913.1| methionyl-tRNA synthetase [Vibrio orientalis CIP 102891]
          Length = 686

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 61/187 (32%), Gaps = 33/187 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAATYLD 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
           S + G I       L  +          ++ A  + +  +L         I  I    + 
Sbjct: 394 SRNAGFISKRFEGKLSANFAEPELY---NEFAAAADRIAELFETREFGRAIREITALADK 450

Query: 401 LNKNISI 407
            N+ +  
Sbjct: 451 ANQYVDE 457


>gi|229190296|ref|ZP_04317297.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
 gi|228593080|gb|EEK50898.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
          Length = 1033

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|37679443|ref|NP_934052.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
 gi|61216264|sp|Q7MM14|SYM_VIBVY RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|37198187|dbj|BAC94023.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
          Length = 690

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 30/171 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                K  N+++H G++ + G KMSKS G F+  +  LE             +R      
Sbjct: 316 GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLE-------HLDPECLRYY---- 363

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQ-------------TSTSKGIIDPAVLSALYNDLNT 361
            Y   ++    R+ + ++ L  + Q              S + G I       L  +   
Sbjct: 364 -YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVE 419

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIEK 411
                     A    + ++      A   I  + +   +++++     + K
Sbjct: 420 PELYNEFVAAADRIAELYEAREFGRAIREITALADKANQYVDEKAPWVVAK 470


>gi|150019400|ref|YP_001311654.1| leucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
 gi|189082993|sp|A6M268|SYL_CLOB8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|149905865|gb|ABR36698.1| leucyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
          Length = 816

 Score = 39.8 bits (92), Expect = 0.96,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 47/141 (33%), Gaps = 41/141 (29%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFGYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQTSTS-----------KGIIDPAVLS-----------------ALY 356
             +      + +  +   +           K  ID A                     + 
Sbjct: 618 DGIKSVGKFVDRIERILENCRNIINSNESTKDSIDSAEKELNFWKHNTIKGVTEDGDKMQ 677

Query: 357 NDLNTVSAIQALHKLARESTK 377
              NT  AI  L +L     K
Sbjct: 678 --FNT--AIARLMELTNALNK 694


>gi|291276464|ref|YP_003516236.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290963658|emb|CBG39490.1| arginyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 537

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 38/100 (38%), Gaps = 3/100 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP- 91
           PT     HIG+AR  I  D L ++ ++   +    Y  N      +++  +         
Sbjct: 124 PT--GPLHIGHARGAIFGDSLAKIGKFLGYDIKTEYYINDAGAQIQMLGLSIMLAGQEHL 181

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
           +   +    +    +++ D  +LA     +   +  HIP+
Sbjct: 182 LKQTVEYPENSYKGEYIIDLAKLAQERFGNDVFSAQHIPE 221


>gi|325981754|ref|YP_004294156.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
 gi|325531273|gb|ADZ25994.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
          Length = 701

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     T  I+ H GFL + G KMSKS G FIT      
Sbjct: 295 HFIGKDILYFHALFWPAMLQNAGYRTPT-KIFAH-GFLTVNGEKMSKSRGTFIT------ 346

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            + +  +      +R       Y   ++ T++ + 
Sbjct: 347 AESYLRQGLNPEWLRYY-----YAAKLNSTLEDID 376


>gi|220932862|ref|YP_002509770.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
 gi|219994172|gb|ACL70775.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
          Length = 653

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 41/134 (30%), Gaps = 13/134 (9%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
             YV  P  Y  D  HIG+A   +  D L +       +        +T  D+      +
Sbjct: 5   TFYVTTPIYYPSDRLHIGHAYTTVAADTLAKFKEMQDYDTMF-----LTGSDEH---GQK 56

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILH 142
            E  +            +    F     RL      +  R T  +H   +  + + I   
Sbjct: 57  IERKASEAGKKPGEYVDEIVATFKDLWKRLGVDY-DYFIRTTNPDHEKVVQEIFKKIYEK 115

Query: 143 GHAYEANNEIIFDT 156
           G  Y+   E  + T
Sbjct: 116 GDIYKGKYEGWYCT 129


>gi|187929666|ref|YP_001900153.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|309781566|ref|ZP_07676301.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
 gi|187726556|gb|ACD27721.1| methionyl-tRNA synthetase [Ralstonia pickettii 12J]
 gi|308919671|gb|EFP65333.1| methionine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
          Length = 710

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   N++ H GFL ++G KMSKS G FIT    ++T            +R      
Sbjct: 333 FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYIDT------GLNPEWLRYYFAAK 385

Query: 315 HYREPIDFTVQRLT 328
                ++ T++ L 
Sbjct: 386 -----LNATMEDLD 394


>gi|118587914|ref|ZP_01545324.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
 gi|118439536|gb|EAV46167.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
          Length = 517

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 13/82 (15%), Positives = 29/82 (35%), Gaps = 8/82 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   ++ D+L R  +    +  ++     T +D+      + +  +     
Sbjct: 23  VNGSPHIGHAFTSVMADILKRNRQALGYDMMLS-----TGVDEH---GQKNQEAAEKEGM 74

Query: 95  AISIITSKNTQQFVKDTTRLAC 116
           ++         +F     RL  
Sbjct: 75  SVEDYLDMRCAEFRAVFDRLDV 96


>gi|118150802|ref|NP_001071314.1| leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
 gi|117306241|gb|AAI26599.1| Leucyl-tRNA synthetase 2, mitochondrial [Bos taurus]
          Length = 616

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 51/173 (29%), Gaps = 22/173 (12%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           D S  + YV     Y     H+G+ R   + D + R  +             + +     
Sbjct: 78  DKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDTIARFQKMRG--------MQVINPMGWD 129

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ- 137
                 E+ +I  N      T  N +   K   +L  C +   +   T  +P      Q 
Sbjct: 130 AFGLPAENAAIERNLHPESWTQSNIRHMRKQLDQLGLCFSWDREI--TTCLPDYYKWTQY 187

Query: 138 ---NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
               +   G AY+    +              +  ++DE     R   K  +K
Sbjct: 188 LFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDEHGCSWRSGAKVEQK 236


>gi|15608147|ref|NP_215523.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
 gi|148660789|ref|YP_001282312.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|167968135|ref|ZP_02550412.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|306775143|ref|ZP_07413480.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001]
 gi|306971250|ref|ZP_07483911.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010]
 gi|307078978|ref|ZP_07488148.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011]
 gi|307083539|ref|ZP_07492652.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012]
 gi|3122902|sp|O05593|SYM_MYCTU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|2052144|emb|CAB08142.1| PROBABLE METHIONYL-TRNA SYNTHETASE METS (MetRS) (Methionine--tRNA
           ligase) [Mycobacterium tuberculosis H37Rv]
 gi|148504941|gb|ABQ72750.1| methionyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
 gi|308216293|gb|EFO75692.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu001]
 gi|308359184|gb|EFP48035.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu010]
 gi|308363118|gb|EFP51969.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu011]
 gi|308366750|gb|EFP55601.1| methionyl-tRNA synthetase metS [Mycobacterium tuberculosis SUMu012]
          Length = 519

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   I  D + R  R    +     VR +T  D+  ++       +       + 
Sbjct: 17  PHVGHAYEYIATDAIARFKRLDRYD-----VRFLTGTDEHGLK---VAQAAAAAGVPTAA 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L   +     R T  +H      L + +   G  Y  N    +  
Sbjct: 69  LARRNSDVFQRMQEALNI-SFDRFIRTTDADHHEASKELWRRMSAAGDIYLDNYSGWYSV 127

Query: 157 S 157
            
Sbjct: 128 R 128


>gi|83746715|ref|ZP_00943764.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Ralstonia solanacearum UW551]
 gi|83726668|gb|EAP73797.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
           [Ralstonia solanacearum UW551]
          Length = 712

 Score = 39.8 bits (92), Expect = 0.97,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 317 HFIGKDILYFHTLFWPAMLR-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 374

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 375 T------GLNPEWLRYYFAAK-----LNATMEDLD 398



 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 16/114 (14%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+    I  D+  R  R    E  + YV         ++ RA +E  
Sbjct: 38  YANGP-----IHIGHMVEYIQTDIWVRFQRMRGHE--IYYVGADDTHGTPVMLRAEKE-- 88

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                     +  +   +  +D          +   +T+   +   L + + L 
Sbjct: 89  ----GITPRQLIERVWTEHKRDFDNFLVSFDNYY--STDS-DENRELCERVYLK 135


>gi|325092268|gb|EGC45578.1| methionine-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 586

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 12/157 (7%)

Query: 10  TLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           +  R ++   + DP     YV  P  Y     H+G+   MI+ DVL R            
Sbjct: 38  SQSRGLSTAPSRDPDKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTD--- 94

Query: 68  YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT- 126
             + +T  D+  ++    +  +  +      +  +N + F ++  R   +   H  R T 
Sbjct: 95  -AKLLTGTDEHGLK---IQQAAAALGMTPQALCDQNCKTF-QNLARKGNVGYDHFIRTTD 149

Query: 127 -NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNY 162
             H   + Y    +   G+ Y + +E  +  S    Y
Sbjct: 150 AEHKEAVRYFWDMLNHRGYIYTSKHEGWYSVSDEAFY 186


>gi|325969563|ref|YP_004245755.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
 gi|323708766|gb|ADY02253.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
          Length = 643

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 33/92 (35%), Gaps = 19/92 (20%)

Query: 255 ADRIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGRS-----WPAP-- 305
           A      A   IH     +NL G KMS   G +I+++ELL   K          +     
Sbjct: 427 AMGYHDLARKLIHYSYEMVNLAGMKMSGRKGVYISLDELLNEAKDRIMEIVKNRFSPDEA 486

Query: 306 ----------VIRLAMLMTHYREPIDFTVQRL 327
                      IR + L     +P+ F+  ++
Sbjct: 487 NRVAEAVATGAIRYSFLSVSPNKPLTFSWDKV 518



 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
             HIG+ R  ++ D L RLLR+      V +  N  D  D++
Sbjct: 130 PMHIGHGRNAVLGDSLARLLRFCGASVRVHFYVN--DCGDQM 169


>gi|283954345|ref|ZP_06371866.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
 gi|283794144|gb|EFC32892.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
          Length = 746

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS  A       +I++H    + +GRKMSKS GN I  NE +       + +   ++R  
Sbjct: 377 QSTNALHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSTDILRFT 429

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K    +    + +     
Sbjct: 430 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNAANYLLLNESKFED 473


>gi|241663776|ref|YP_002982136.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D]
 gi|240865803|gb|ACS63464.1| methionyl-tRNA synthetase [Ralstonia pickettii 12D]
          Length = 709

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 12/74 (16%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   N++ H GFL ++G KMSKS G FIT    ++T            +R      
Sbjct: 333 FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYIDT------GLNPEWLRYYFAAK 385

Query: 315 HYREPIDFTVQRLT 328
                ++ T++ L 
Sbjct: 386 -----LNATMEDLD 394


>gi|103486422|ref|YP_615983.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|122985147|sp|Q1GUM2|SYV_SPHAL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|98976499|gb|ABF52650.1| valyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 931

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D++F        Q            +++H      +G+KMSKS GN +    L
Sbjct: 507 DVLISGFDILFFWDARMAMQGMEFMGEVPWRTLYLHGLVRAPDGQKMSKSKGNVVDPIGL 566

Query: 292 LETKKFGGRSWPAPVIRLAM 311
           ++        + A  +R  M
Sbjct: 567 ID-------QYGADALRFFM 579


>gi|312897476|ref|ZP_07756900.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310621537|gb|EFQ05073.1| methionyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 648

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 38/146 (26%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTV 324
             +G+L ++G KMSKS GN +    L+E        + A  +R  +L      +  +F++
Sbjct: 290 FGHGWLIVDGTKMSKSLGNVVDPVPLIER-------YGADALRYYLLKEVRLGQDGNFSL 342

Query: 325 ----------------QRLTEAEILLSKWPQTSTSKGIIDPAV---LSALY--------- 356
                             L     ++ K+     +      AV   L+AL          
Sbjct: 343 PTFINRINADLANDLGNLLQRTLAMVEKYEDGVVAGPTDKEAVDDELAALAVETVRKFEA 402

Query: 357 --NDLNTVSAIQALHKLARESTKNHD 380
             +D+    A+  +  L R S K  D
Sbjct: 403 EMDDMKIDDALNDIWGLIRRSNKYID 428



 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 34/119 (28%), Gaps = 11/119 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+     + D L R  R         ++    +   KI   A  +             
Sbjct: 23  HIGHTYCTTIADSLARFHRLRG--DDTLFITGSDEHGQKIQRAAEAQGMKPI------EY 74

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
                  F     RL         R T   H   +  L+Q    +G  Y++  E  + T
Sbjct: 75  VDGIVALFKDLWKRLNISN-DVFIRTTEPRHERVVQDLMQRSFDNGDIYKSEYEGWYCT 132


>gi|298695026|gb|ADI98248.1| Leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 805

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLIV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|298369470|ref|ZP_06980787.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282027|gb|EFI23515.1| isoleucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 930

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 596 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 648

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 649 LKRVTESYRRIRNT 662


>gi|289434947|ref|YP_003464819.1| hypothetical protein lse_1582 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171191|emb|CBH27733.1| leuS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 806

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 36/96 (37%), Gaps = 9/96 (9%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +R+  M M   
Sbjct: 559 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRMYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
              I +    L  +   L + W    T +G +   V
Sbjct: 612 EASIAWNENGLEGSRKFLDRIWRLLVTEEGTLAEKV 647


>gi|281210473|gb|EFA84639.1| leucyl-tRNA synthetase [Polysphondylium pallidum PN500]
          Length = 1059

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 62/172 (36%), Gaps = 29/172 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G+DL+  H    +         +        NGF+ L G KMSKS+GNF+T+ 
Sbjct: 667 PLDLRVSGIDLVQNHLTFFLYNHAAIFAEKMQPKGIRANGFVQLNGAKMSKSSGNFLTLF 726

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA----EILLSKWPQTSTSKG 345
           + +       + + A   R+A+               + +A    +  L+   +  T   
Sbjct: 727 DAV-------QQFSADGTRIALADAG---------DGIEDANFVDKTALTSLFKVHTQVQ 770

Query: 346 IIDPAVLSALYNDL-----NTVSAIQALHKLARESTKNHD--LLPIFNASAH 390
            +   +   + + L     N +  +  + ++ R   K  +      F  + H
Sbjct: 771 WVQEMID--MKDKLYSGESNRLQDVIFISEMNRAINKADEAYAKSQFREALH 820


>gi|255066104|ref|ZP_05317959.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255049649|gb|EET45113.1| isoleucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 826

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS GN +   E+          + A ++RL    T Y   +  + + 
Sbjct: 492 HGFVVDQNGRKMSKSIGNVVAPQEV-------YNEFGADILRLWAASTDYSGELAISKEI 544

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 545 LKRVTESYRRIRNT 558


>gi|288940932|ref|YP_003443172.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896304|gb|ADC62140.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 683

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A     +A I+ H GFL ++G+KMSKS G FI     L+
Sbjct: 290 HFIGKDIIYFHALFFPAMLHGAGFRTPSA-IFAH-GFLTVDGQKMSKSRGTFIKARTYLD 347

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 348 -------HLNPEYLRYYF 358


>gi|240949589|ref|ZP_04753924.1| leucyl-tRNA synthetase [Actinobacillus minor NM305]
 gi|240295847|gb|EER46523.1| leucyl-tRNA synthetase [Actinobacillus minor NM305]
          Length = 862

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 51/153 (33%), Gaps = 43/153 (28%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             ++    KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVHSGMTKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSKW------PQTSTSKGIIDPA---------------VLSALYND----- 358
             +  A+  L +          S +   +D A                ++ + +D     
Sbjct: 661 SGVEGAKRFLGRVWNLVYEYAKSPATVALDVASLTKAQKELRRDVHKTIAKVSDDIGRRQ 720

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L  + TK         A   
Sbjct: 721 TFNT--AIAAVMELMNKLTKAPLETEQDRAVMA 751


>gi|240146704|ref|ZP_04745305.1| leucine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|257201135|gb|EEU99419.1| leucine--tRNA ligase [Roseburia intestinalis L1-82]
 gi|291536292|emb|CBL09404.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Roseburia intestinalis M50/1]
 gi|291538835|emb|CBL11946.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Roseburia intestinalis XB6B4]
          Length = 805

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 34/167 (20%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR---LAM---- 311
           E       H   L   G KMSKS GN +  ++++       R + A  +R   + +    
Sbjct: 568 EPYQKRTSHGMILGENGEKMSKSRGNVVNPDDIV-------REYGADTLRTYEMFIGAFD 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL----------YND 358
           L         ++   +      L +        T +      + + +          Y +
Sbjct: 621 LSAS------WSEDGVKGCRRFLERVWKLQDIMTEETGYSKELETKMHQTIKKVSSDYEN 674

Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           L   +AI A+  L  E  K + +      +  IL +     H+ + +
Sbjct: 675 LKYNTAIAAMMALINEFYKKNAVTKGEYETLLIL-LNPVAPHITEEL 720


>gi|242823854|ref|XP_002488143.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
 gi|218713064|gb|EED12489.1| leucyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
          Length = 1000

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 47/163 (28%), Gaps = 28/163 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+ R   + DVL R  R               D+   I   A     E+ +
Sbjct: 103 PYPSGTMHMGHLRVYTISDVLSRFYRMRGH-----------DVLHPIGWDAFGLPAENAA 151

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAP--THQPRATNHIPQMIYLIQNI----ILHG 143
           I      +  T++N ++  +         P    +       P+     Q I       G
Sbjct: 152 IERGVQPAKWTAQNIERMKEQLRSFG---PGFDWERELMTCSPEFYKHTQRIFLMLYEKG 208

Query: 144 HAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
            AY+A   +              +  ++D      R   K  +
Sbjct: 209 LAYQAEALVNYDPVDKT----VLANEQVDANGFSWRSGAKVEQ 247


>gi|121535687|ref|ZP_01667491.1| hypothetical protein TcarDRAFT_0122 [Thermosinus carboxydivorans
           Nor1]
 gi|121305718|gb|EAX46656.1| hypothetical protein TcarDRAFT_0122 [Thermosinus carboxydivorans
           Nor1]
          Length = 127

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 379 HDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSA 428
            ++   +   A ILGI V +     E   + ++  ++ ++  R    + K ++++
Sbjct: 6   AEMRDAYFMMADILGILVKERAGLLEGDCELVAGLMDIIIAVRQEARQRKDWATS 60


>gi|86609400|ref|YP_478162.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|109895046|sp|Q2JK96|SYR_SYNJB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86557942|gb|ABD02899.1| arginyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 598

 Score = 39.8 bits (92), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +MSK  GNF+++N+L+E  + G         R  +L +    PI+F +  
Sbjct: 411 RMSKRTGNFVSLNDLIEDPEIGVGV---DAARWFLLSSSMDSPINFDLDL 457


>gi|324500999|gb|ADY40450.1| Isoleucyl-tRNA synthetase [Ascaris suum]
 gi|324505911|gb|ADY42532.1| Isoleucyl-tRNA synthetase [Ascaris suum]
          Length = 827

 Score = 39.8 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 10/117 (8%)

Query: 195 KRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
           K+S  +   W +S    G       C+       G   D+   G+D      ++ +  S 
Sbjct: 431 KKSKDIMDVWLDSGMAWG-------CARDVER-CGDTVDLVVEGVDQFRGWFQSLLLTSF 482

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                     I +H   ++   +KMSKS GN I   +++        +  A  +RL 
Sbjct: 483 ALQGKHPYKRILVHGFAVDENKKKMSKSVGNVI-DPDVITDGSLNSDALGADGLRLW 538


>gi|228955959|ref|ZP_04117895.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228803739|gb|EEM50422.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 1033

 Score = 39.8 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|206972102|ref|ZP_03233050.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
 gi|206733025|gb|EDZ50199.1| isoleucyl-tRNA synthetase [Bacillus cereus AH1134]
          Length = 1033

 Score = 39.8 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|170595342|ref|XP_001902341.1| methionyl-tRNA synthetase [Brugia malayi]
 gi|158590031|gb|EDP28810.1| methionyl-tRNA synthetase, putative [Brugia malayi]
          Length = 468

 Score = 39.8 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 9/99 (9%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+    ++ DV  R      G+  +      T  D+  ++    +  
Sbjct: 31  YANGP-----PHIGHLYTALLADVSNRWKLLKGGDVDLNNSLFTTGTDEHGLK---IQQT 82

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +              + +F           P    R T 
Sbjct: 83  ATTAGCDPQRYCDDISDKFKDLFRAFGIQ-PNDFIRTTE 120


>gi|160901828|ref|YP_001567409.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|226695263|sp|A9BF22|SYL_PETMO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|160359472|gb|ABX31086.1| leucyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 828

 Score = 39.8 bits (92), Expect = 0.99,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 40/114 (35%), Gaps = 15/114 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +   G KMSKS G
Sbjct: 530 PVDQYIGGVEHAILHLLYSRFITKVLKDLGYVSFDEPFKNLFT-QGMIYRNGAKMSKSKG 588

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSK 336
           N ++  E++E        +    +R   + M       ++    +      L+K
Sbjct: 589 NVVSPEEMIE-------KYGTDALRTYILFMAPPERDAEWNDSGIEGTYRFLNK 635


>gi|331703585|ref|YP_004400272.1| arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
 gi|328802140|emb|CBW54294.1| Arginyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
           95010]
          Length = 554

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 6/83 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT   + H+G+AR  ++  VL  L +         Y  N  D  ++I   A         
Sbjct: 125 PT--GYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVN--DAGNQINVLAVTVFVHYLQ 180

Query: 91  PINDAISIITSKNTQQFVKDTTR 113
            +N       +        D  +
Sbjct: 181 ALNIDAKKPENCYAGDMYDDLAK 203


>gi|332161115|ref|YP_004297692.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325665345|gb|ADZ41989.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 635

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 251 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 307

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 308 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 359

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A      +       A   I+ + ++   ++++  
Sbjct: 360 INKRFAGKLADHLADPALYKTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQA 419

Query: 406 SIAIEK 411
              + K
Sbjct: 420 PWVVAK 425


>gi|315303474|ref|ZP_07874061.1| leucyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628156|gb|EFR96702.1| leucyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 806

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 16/160 (10%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    ++     L     KMSKS GN +  +E++E        + A  +R+  M M   
Sbjct: 559 KEPFQKLFNQGMILGENNEKMSKSRGNVVNPDEVVE-------KYGADTLRMYEMFMGPL 611

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
              I +    L  +   L + W    T +G +   V +         +  +A H++ +  
Sbjct: 612 EASIAWNENGLEGSRKFLDRIWRLLVTEEGTLAEKVTTEPN-----ANLEKAYHQMVKTV 666

Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQ 414
           T +++ L  FN     L I + + +   +I    IE  VQ
Sbjct: 667 TNHYENLR-FNTGISQLMIFINEAYKQPSIPKEYIEGFVQ 705


>gi|302340173|ref|YP_003805379.1| lysyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301637358|gb|ADK82785.1| lysyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 525

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 49/318 (15%), Positives = 100/318 (31%), Gaps = 59/318 (18%)

Query: 28  MYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA-R 84
           +Y C  G T     HIGN R +I  +++ R LR    +    Y  +  D+  K+ +   +
Sbjct: 25  VYTCASGITPSGTVHIGNFREIISVELVVRALRERGKKVRFIYSWDDYDVFRKVPKNMPK 84

Query: 85  QEHPSIPINDAISII----------TSKNTQQFVKDTTRLACLAPTHQP----RATNHIP 130
            E     +   I+I+             N ++       +             R++ +  
Sbjct: 85  PELLETYLRKPITIVPDTSGRYASYAEANEKELEALLPGVGVEPEYIYQASRYRSSYYAE 144

Query: 131 QMIYLIQ-----NIILHGHAYEANNEIIFDTSSIPNY-GSFSRRKID-EQKMGTRVP-EK 182
            +   ++       IL+ H      +  +  S    +    +   +D + + G R   ++
Sbjct: 145 GIRQALEKRDTIRAILNEHRTSPLPDEWWPVSVFSTFTDKDTTTVLDWDGEWGLRYRCDE 204

Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
             K+   D    + +  ++  W   W      W +E             D    G D   
Sbjct: 205 TGKEESLDL---RTTAAVKLPWRVDWPMR---WALE-----------GVDFEPAGKD--- 244

Query: 243 PHH------ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            HH      +            +   +       +   G K+S S+G  I + ++LE   
Sbjct: 245 -HHSEGGSFDTARKVVEQVYGGKAPVSFQYDFIRIKGRGGKISSSSGEVIALPDVLEV-- 301

Query: 297 FGGRSWPAPVIRLAMLMT 314
                +   ++R     T
Sbjct: 302 -----YQPEIVRYLFAGT 314


>gi|299137612|ref|ZP_07030793.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
 gi|298600253|gb|EFI56410.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
          Length = 784

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/93 (24%), Positives = 32/93 (34%), Gaps = 9/93 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   IV DVL R  R    +   T+    TD         + E  +     
Sbjct: 17  VNARPHIGHAYTTIVADVLARRHRLLGDD---TFFLTGTD-----EHGQKIERSAAVAGI 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           A      + + QF     R+  L      R T+
Sbjct: 69  APQQFADQVSIQFRNLWDRMG-LTYDRYIRTTD 100


>gi|228965178|ref|ZP_04126272.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228794412|gb|EEM41924.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 1033

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|42561129|ref|NP_975580.1| arginyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
           str. PG1]
 gi|81400554|sp|Q6MT14|SYR_MYCMS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42492626|emb|CAE77222.1| arginine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301320483|gb|ADK69126.1| arginine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 554

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 27/83 (32%), Gaps = 6/83 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT   + H+G+AR  ++  VL  L +         Y  N  D  ++I   A         
Sbjct: 125 PT--GYLHVGHARNAVIGSVLVNLFKKAGYNVQTEYYVN--DAGNQINVLAVTVFVHYLQ 180

Query: 91  PINDAISIITSKNTQQFVKDTTR 113
            +N       +        D  +
Sbjct: 181 ALNIDAKKPENCYAGDMYDDLAK 203


>gi|313901154|ref|ZP_07834642.1| isoleucine--tRNA ligase [Clostridium sp. HGF2]
 gi|312954112|gb|EFR35792.1| isoleucine--tRNA ligase [Clostridium sp. HGF2]
          Length = 908

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 7/120 (5%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           AM    LG   D++  G D       + +              +  H   ++ +G KMSK
Sbjct: 537 AMMERGLGYPADLYFEGSDQYRGWFNSSLIIGTAVHGHSPYKQVLSHGFVMDGKGVKMSK 596

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S  N +   E+        + + A ++RL      Y+     + + L +      K   T
Sbjct: 597 SQWNAVAPGEIT-------KKYGADILRLWATSVDYQADCSMSDEILKQISEQYRKVRNT 649


>gi|313665274|ref|YP_004047145.1| arginine--tRNA ligase [Mycoplasma leachii PG50]
 gi|312949800|gb|ADR24396.1| arginine--tRNA ligase [Mycoplasma leachii PG50]
          Length = 554

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 28/83 (33%), Gaps = 6/83 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT   + H+G+AR  ++  VL  L +    +    Y  N  D  ++I   A         
Sbjct: 125 PT--GYLHVGHARNAVIGSVLVNLFKKAGYKVQTEYYVN--DAGNQINVLAVTVFVHYLQ 180

Query: 91  PINDAISIITSKNTQQFVKDTTR 113
            +N       +        D  +
Sbjct: 181 ALNIDAKKPENCYAGDMYDDLAK 203


>gi|119493798|ref|ZP_01624366.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
           sp. PCC 8106]
 gi|119452440|gb|EAW33628.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA [Lyngbya
           sp. PCC 8106]
          Length = 755

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 49/131 (37%), Gaps = 13/131 (9%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              +F+ +   +AE     +   +    +I   +   L+N + T+  +       +  + 
Sbjct: 125 SKFNFSNKTERQAENFRRMFLAMAKDIRVIVVKLADRLHN-MRTLEFLPD----HKRRSI 179

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNK--------NISIAIEKLVQERLILLKMKKFSSAD 429
             +   IF   AH LGI   K  L               I+ LV ++  + + K    AD
Sbjct: 180 ALETREIFAPLAHRLGIGRFKWELEDLSFKYLEPEAYREIQSLVADKRNIREEKLAEVAD 239

Query: 430 YIRKQLESKGF 440
           ++R +LE  G 
Sbjct: 240 FLRTRLEKAGI 250


>gi|2501014|sp|Q94425|SYIM_CIOIN RecName: Full=Probable isoleucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|1638826|emb|CAB02584.1| COS1.1 [Ciona intestinalis]
          Length = 413

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMT 314
            +    N+ +H   L+ +G+KMSKS GN +    L    K   R  ++ A  +R  +  +
Sbjct: 278 GVAPYKNLMVHGFVLDEKGQKMSKSIGNVVDPMVLTNGGKNPQRDPAYGADALRWWVAES 337

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  + +  +   +  A   + K   +  
Sbjct: 338 NVHQDVHISTTIIKSAAESVQKIRNSVR 365


>gi|301769295|ref|XP_002920066.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like
           [Ailuropoda melanoleuca]
 gi|281353829|gb|EFB29413.1| hypothetical protein PANDA_008748 [Ailuropoda melanoleuca]
          Length = 593

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 326 GAGMSPPHRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 375


>gi|148927744|ref|ZP_01811180.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886907|gb|EDK72441.1| leucyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 811

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHY 316
            E    +  H   L  +GRKMSKS GN I  ++L++      + + A  IR+  + +  +
Sbjct: 556 HEPFKTLRNHGMILAPDGRKMSKSWGNVIAPDDLIK------QGYGADAIRIMELFIGPW 609

Query: 317 REPIDFTVQRLTEAEILLSK 336
            +  +++V+ +  A   L +
Sbjct: 610 NQSANWSVEGVGGAFRFLQR 629


>gi|153005149|ref|YP_001379474.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
 gi|166232753|sp|A7HCP4|SYR_ANADF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|152028722|gb|ABS26490.1| arginyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
          Length = 605

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V D +  LLR+   E    Y  N      + + R+         
Sbjct: 133 PT--GPMHVGHGRNAVVGDGVQSLLRWAGFEVTREYYVNDYGAQVQTLARSVHLRYQELF 190

Query: 93  NDAISIITSKNTQQFVKDTTR 113
              +++       ++VKD   
Sbjct: 191 GRQVTMPPKSYPGEYVKDVAA 211


>gi|115398011|ref|XP_001214597.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
 gi|114192788|gb|EAU34488.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
          Length = 578

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   MI+ DVL R  R   G+     +    +   KI + A           
Sbjct: 64  VNAAPHVGHLYTMIIADVLKRW-RALAGDTDAQLLTGTDEHGMKIQQAAAAAGMDTQAFC 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
            ++  T        +   + A +   H  R T+  H   + Y  + +   G+ Y + +E 
Sbjct: 123 DMNFKT-------FEALAKAANMDYNHFIRTTDAAHKEAVQYFWEMLDHRGYIYTSKHEG 175

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 176 WYSVSDETFY 185


>gi|83594960|ref|YP_428712.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|123739388|sp|Q2RN70|SYL_RHORT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83577874|gb|ABC24425.1| leucyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
          Length = 862

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 9/117 (7%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    +LE       S+ A   RL ML  +     +D+T   +  A   +
Sbjct: 621 EKMSKSKMNTVDPTAILE-------SYGADAARLFMLSDSPPDRDMDWTDSGIEGAWRYI 673

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            +  + +    I   AV + L  DL    A   +  + +      D L  F  +A +
Sbjct: 674 GRLWRMALQPQIDPGAVGAPLPADLG-PGAAALVRHVHKAVAGVTDDLEKFRFNAAV 729


>gi|58697671|ref|ZP_00372842.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
 gi|58535824|gb|EAL59640.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           simulans]
          Length = 221

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL  LL+    +    Y  N
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYIN 167


>gi|332673839|gb|AEE70656.1| methionine--tRNA ligase [Helicobacter pylori 83]
          Length = 650

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-QEHPSIPIN 93
           V D  HIG+A   ++ D L +       E  V ++    +   KI + AR +        
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFFLTGTDEHGQKIEQSARLRNQSPKAYA 70

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           D+IS I       F  D         +   +   +  ++      +   G  Y+      
Sbjct: 71  DSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEI------MFEKGDIYKGAYSGY 124

Query: 154 FDTSSIPNYGSFSR 167
           +   S  +Y + S+
Sbjct: 125 YCV-SCESYCAISK 137


>gi|315031306|gb|EFT43238.1| leucyl-tRNA synthetase [Enterococcus faecalis TX0017]
          Length = 804

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 51/180 (28%), Gaps = 37/180 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLYNQGMILGENNEKMSKSRG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++         + A  +RL  M M      I +    L  +   L +  +   
Sbjct: 583 NVVNPDDVVA-------KYGADTLRLYEMFMGPLDASIAWNENGLEGSRKFLDRVWRLIV 635

Query: 343 SKGIIDPAVLSALYN----------------D-----LNTVSAIQALHKLARESTKNHDL 381
            +       ++ + +                D      NT  AI  L      + K   L
Sbjct: 636 DEEGKMRDRITTINDGRLTKVYHQTVKKVTEDMANLHFNT--AISQLMVFVNVANKVDAL 693


>gi|308189924|ref|YP_003922855.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|319777133|ref|YP_004136784.1| leucyl-tRNA synthetase [Mycoplasma fermentans M64]
 gi|307624666|gb|ADN68971.1| leucine--tRNA ligase [Mycoplasma fermentans JER]
 gi|318038208|gb|ADV34407.1| Leucyl-tRNA synthetase [Mycoplasma fermentans M64]
          Length = 780

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 9/92 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++ +E++       + + A  +RL +L      
Sbjct: 526 EPFDNL-LTQGMILKDGLKMSKSKGNVVSPDEMI-------KKYDADTMRLFVLFAAPPE 577

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +++    +      + +    S      D 
Sbjct: 578 KELEWISSGIEGCHKFIKRLIARSKEVKAKDK 609


>gi|261838373|gb|ACX98139.1| methionyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 653

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 10/134 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-QEHPSIPIN 93
           V D  HIG+A   ++ D L +       E  V ++    +   KI + AR +        
Sbjct: 13  VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFFLTGTDEHGQKIEQSARLRNQSPKAYA 70

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           D+IS I       F  D         +   +   +  ++      +   G  Y+      
Sbjct: 71  DSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEI------MFEKGDIYKGAYSGY 124

Query: 154 FDTSSIPNYGSFSR 167
           +   S  +Y + S+
Sbjct: 125 YCV-SCESYCAISK 137


>gi|260574448|ref|ZP_05842452.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259023344|gb|EEW26636.1| leucyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 907

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 39/140 (27%), Gaps = 13/140 (9%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            DP+  + YV    P      H+G+ R   + DV+ R  +       V +          
Sbjct: 27  RDPAKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVAR--QKAAAGYSVLHPMGWDAFGMP 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
               A +              T  N          L       +  AT    +  Q   +
Sbjct: 85  AENAAMERGGH------PKTWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAM 138

Query: 136 IQNIILHGHAYEANNEIIFD 155
             +++  G  Y     + +D
Sbjct: 139 FIDMMAAGLVYRKAAVVNWD 158


>gi|167766274|ref|ZP_02438327.1| hypothetical protein CLOSS21_00778 [Clostridium sp. SS2/1]
 gi|317496965|ref|ZP_07955295.1| glutaminyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167711993|gb|EDS22572.1| hypothetical protein CLOSS21_00778 [Clostridium sp. SS2/1]
 gi|291559093|emb|CBL37893.1| glutaminyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
 gi|316895977|gb|EFV18129.1| glutaminyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 556

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 43/117 (36%), Gaps = 26/117 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+ ++   + Y L + Y G+    +       DD    + ++E+ +   
Sbjct: 36  PEPNGYLHIGHAKSIL---LNYGLAQEYGGDFHFRF-------DDTNPTKEKEEYVNSIK 85

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
            D   +    +   +                 A+N+  +M    + +I  G AY  +
Sbjct: 86  EDVEWLGADYHEHIYY----------------ASNYFDKMYECAEFLIKKGKAYVCD 126


>gi|153873508|ref|ZP_02002069.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS]
 gi|152070026|gb|EDN67931.1| truncated Methionyl-tRNA synthetase [Beggiatoa sp. PS]
          Length = 398

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A        + TA +++H GFL ++G+KMSK+ G FI+    L 
Sbjct: 288 HFIGKDIQYFHCLFWPAMLTAGGFRKPTA-VFVH-GFLKVDGQKMSKTRGTFISARTYLN 345

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 346 -------HLQPEYLRYYF 356


>gi|149632053|ref|XP_001513511.1| PREDICTED: similar to Probable leucyl-tRNA synthetase,
           mitochondrial precursor (Leucine--tRNA ligase) (LeuRS)
           [Ornithorhynchus anatinus]
          Length = 901

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 55/187 (29%), Gaps = 29/187 (15%)

Query: 13  RKITEFQAI---DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
           R   +F  I   D S  + YV     Y     H+G+ R   + D + R  +         
Sbjct: 64  RVKEQFYRISDTDKSKPKFYVLSMFPYPSGKLHMGHVRVYTISDAIARFQKMRG-----M 118

Query: 68  YVRNITDID--DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPR 124
            V N    D      E A  E    P N      T  N +   +   R+  C     +  
Sbjct: 119 QVINPMGWDAFGLPAENAAIERGLHPEN-----WTQSNIKHMREQLNRIGLCFNWDREI- 172

Query: 125 ATNHIPQMIYLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
            T  +P      Q     +   G AY+    +              +  ++DE     R 
Sbjct: 173 -TTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNWDPVDQT----VLANEQVDENGCSWRS 227

Query: 180 PEKYHKK 186
             K  +K
Sbjct: 228 GAKVEQK 234


>gi|157369816|ref|YP_001477805.1| methionyl-tRNA synthetase [Serratia proteamaculans 568]
 gi|187647768|sp|A8GC37|SYM_SERP5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157321580|gb|ABV40677.1| methionyl-tRNA synthetase [Serratia proteamaculans 568]
          Length = 675

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 72/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L + L   +  Q     A+   + +       A   I+ + ++   ++++  
Sbjct: 400 ISKRFGGQLADKLADPALYQTFVDAAQSIAEAYASRESGRAIREIMALADLANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|119196555|ref|XP_001248881.1| hypothetical protein CIMG_02652 [Coccidioides immitis RS]
          Length = 1230

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 43/155 (27%), Gaps = 24/155 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  R               D+   +   A     E+ +I      
Sbjct: 369 HMGHVRVYTISDVLARFKRMKGY-----------DVLHPMGWDAFGLPAENAAIERGINP 417

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI 152
           +  T +N  +  +    L               P+     Q     +   G AY+A   +
Sbjct: 418 ATWTKENIAKMKEQLKGLG-TDFDWDREFMTCSPEFYKHTQRLFLMLHEKGLAYQAKAMV 476

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                         +  ++D      R      K+
Sbjct: 477 NYDPVDQT----VLANEQVDANGRSWRSGAVVEKR 507


>gi|6137708|pdb|1QU2|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|6137710|pdb|1QU3|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
 gi|10121057|pdb|1FFY|A Chain A, Insights Into Editing From An Ile-Trna Synthetase
           Structure With Trna(Ile) And Mupirocin
          Length = 917

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTSVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +      K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDDYRKIRNT 651



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189


>gi|86147931|ref|ZP_01066235.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
 gi|85834256|gb|EAQ52410.1| methionyl-tRNA synthetase [Vibrio sp. MED222]
          Length = 686

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKASTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                        +R       Y   ++    R+ + ++ L  + Q   + 
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNAD 384


>gi|125974586|ref|YP_001038496.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|256004052|ref|ZP_05429037.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|125714811|gb|ABN53303.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
 gi|255991975|gb|EEU02072.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
 gi|316941704|gb|ADU75738.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
          Length = 654

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 59/182 (32%), Gaps = 44/182 (24%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A        E        +G+L LEG KMSKS GN +    L
Sbjct: 255 DVHLVGKEIVRFHTIIWPAMLMAL--GEPLPKQVFGHGWLLLEGGKMSKSKGNVVDPVVL 312

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-----TEAEILLSKWPQTSTSKG 345
           +E        +    IR  +L    +     F+ + L     ++    L      S +  
Sbjct: 313 VE-------KYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL--VSRTVA 363

Query: 346 IIDPAVLSAL---------YNDL-----NTVS-------------AIQALHKLARESTKN 378
           +ID      L          +DL     +T               A+  + K    + K 
Sbjct: 364 MIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAISRTNKY 423

Query: 379 HD 380
            D
Sbjct: 424 ID 425


>gi|320156804|ref|YP_004189183.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
 gi|319932116|gb|ADV86980.1| methionyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
          Length = 660

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 56/171 (32%), Gaps = 30/171 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                K  N+++H G++ + G KMSKS G F+  +  LE             +R      
Sbjct: 286 GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLE-------HLDPECLRYY---- 333

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQ-------------TSTSKGIIDPAVLSALYNDLNT 361
            Y   ++    R+ + ++ L  + Q              S + G I       L  +   
Sbjct: 334 -YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVE 389

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIEK 411
                     A    + ++      A   I  + +   +++++     + K
Sbjct: 390 PELYNEFVAAADRIAELYEAREFGRAIREITALADKANQYVDEKAPWVVAK 440


>gi|237752079|ref|ZP_04582559.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
 gi|229376646|gb|EEO26737.1| leucyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
          Length = 821

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 35/83 (42%), Gaps = 15/83 (18%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
           E  +++ +  G +  +G KMSKS GN +  +E++         + A   RL +L      
Sbjct: 571 EPFSHL-LTQGMVTKDGAKMSKSKGNVVDPSEIIT-------QFGADTARLFILFA---A 619

Query: 319 P----IDFTVQRLTEAEILLSKW 337
           P    +++    +  +   + + 
Sbjct: 620 PPIRELEWNDSAVEGSYRFIKRL 642


>gi|281419111|ref|ZP_06250128.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
 gi|281407260|gb|EFB37521.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
          Length = 654

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 59/182 (32%), Gaps = 44/182 (24%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A        E        +G+L LEG KMSKS GN +    L
Sbjct: 255 DVHLVGKEIVRFHTIIWPAMLMAL--GEPLPKQVFGHGWLLLEGGKMSKSKGNVVDPVVL 312

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-----TEAEILLSKWPQTSTSKG 345
           +E        +    IR  +L    +     F+ + L     ++    L      S +  
Sbjct: 313 VE-------KYGVDAIRYFLLREVPFGSDGVFSNEALINRINSDLANDLGNL--VSRTVA 363

Query: 346 IIDPAVLSAL---------YNDL-----NTVS-------------AIQALHKLARESTKN 378
           +ID      L          +DL     +T               A+  + K    + K 
Sbjct: 364 MIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELLDRLQFSTALTEIWKAISRTNKY 423

Query: 379 HD 380
            D
Sbjct: 424 ID 425


>gi|229542451|ref|ZP_04431511.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1]
 gi|229326871|gb|EEN92546.1| arginyl-tRNA synthetase [Bacillus coagulans 36D1]
          Length = 558

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 28/173 (16%), Positives = 45/173 (26%), Gaps = 49/173 (28%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT------------------- 73
           PT     H+G+AR   V D L  +L     E    Y  N                     
Sbjct: 134 PT--GDLHLGHARGAAVGDSLCNILEKAGYEVTREYYINDAGNQIHNLALSVEARYFQAL 191

Query: 74  --------------DIDDKIIERARQEHPSIPIND--AISIITSKNTQQF-----VKDTT 112
                         DI D   + A +        D         +    +      KD  
Sbjct: 192 GIEKEMPADGYYGQDIIDLGKKLADEYGRKFVDTDEKTRYEFFRQYGLDYEMAKLKKDLE 251

Query: 113 RLACLAPTHQPRATNH----IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
                        + +    I +M+ L   +   GH YE +    F +++  +
Sbjct: 252 DFRVRFDVWYSETSLYKSGKIDEMLKL---MREKGHIYEKDGATWFRSTAFGD 301


>gi|332004946|gb|AED92329.1| valyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 974

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  +++++H    + +GRKMSKS GN I   + +       + +    +R  + + 
Sbjct: 576 FTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTI-------KDFGTDALRFTIALG 628

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              + ++ + +RLT  +   +K    
Sbjct: 629 TAGQDLNLSTERLTANKAFTNKLWNA 654


>gi|328545062|ref|YP_004305171.1| Isoleucyl-tRNA synthetase protein [polymorphum gilvum SL003B-26A1]
 gi|326414804|gb|ADZ71867.1| Isoleucyl-tRNA synthetase protein [Polymorphum gilvum SL003B-26A1]
          Length = 996

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC   R      +  H   +  +GRKMSKS GN +   +++       + + A ++RL +
Sbjct: 641 SCGTRRHAPYDAVLTHGFTMAEDGRKMSKSLGNQVFPQDVI-------KQYGADILRLWV 693

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y E      + L        K   T
Sbjct: 694 ASSDYAEDQRIGPEILKTNVDSYRKLRNT 722


>gi|218709003|ref|YP_002416624.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
 gi|254782875|sp|B7VLW8|SYM_VIBSL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|218322022|emb|CAV18060.1| methionyl-tRNA synthetase [Vibrio splendidus LGP32]
          Length = 686

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKASTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                        +R       Y   ++    R+ + ++ L  + Q   + 
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNAD 384


>gi|222528338|ref|YP_002572220.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
 gi|222455185|gb|ACM59447.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
          Length = 653

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 13/136 (9%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
             + Y+  P  Y  D  HIG+    +  D + R  R    +    +    TD   + IER
Sbjct: 3   KPKFYITTPIYYPSDKLHIGHTYCTVAADTIARYKRLRGYD---VFFLTGTDEHGQKIER 59

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
             QE    P      I+ S      +KD  +L  ++     R T   H   +  +   + 
Sbjct: 60  KAQEAGKTPQEYVDEIVAS------IKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLY 113

Query: 141 LHGHAYEANNEIIFDT 156
             G  Y++  E  + T
Sbjct: 114 EQGDIYKSEYEGWYCT 129



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 59/202 (29%), Gaps = 63/202 (31%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A             +   +G+L LEG KMSKS GN +     
Sbjct: 255 DVHLVGKEIVRFHTIIWPAILMAL--GLPLPKMVFGHGWLLLEGGKMSKSKGNVV----- 307

Query: 292 LETKKFGGRSWPAPVIRLAMLM-------THYREPIDFTVQRLT---------------- 328
                   + +    +R  +L         H      F+   L                 
Sbjct: 308 --DPVILAQKYGVDSLRYFLLREIPFGADGH------FSEDSLRTRHNSDLANDLGNLLS 359

Query: 329 -----------------EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
                            EA+  L    +  T    +   V   L ++L   +A+  + KL
Sbjct: 360 RTVAMIEKYFDGIIHLPEAKEDLDN--ELITLAKEVYEKVCRCL-DELQFSNALIEIWKL 416

Query: 372 ARESTKNHDLLPIFNASAHILG 393
              + K  D          +LG
Sbjct: 417 IARANKYID-----ETMPWVLG 433


>gi|84394346|ref|ZP_00993068.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
 gi|84375039|gb|EAP91964.1| methionyl-tRNA synthetase [Vibrio splendidus 12B01]
          Length = 686

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGA-GFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKASTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                        +R       Y   ++    R+ + ++ L  + Q   + 
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNAD 384


>gi|186680640|ref|YP_001863836.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|186463092|gb|ACC78893.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 534

 Score = 39.8 bits (92), Expect = 1.0,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  DV+ R  R          V  IT  D+      + +  +  +  
Sbjct: 20  VNDVPHIGSAYTTIAADVVARFHRLLG-----HQVLLITGTDEH---GQKIQRSAESLGK 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           A      +    F+     L         R T   H   +    + +   G  Y+   + 
Sbjct: 72  APQEFCDEVVPSFISLWQLLDIKY-DRFSRTTAPRHEAIVKEFFERVWESGDIYQGQQQG 130

Query: 153 IFDTS 157
            +  S
Sbjct: 131 WYCVS 135



 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 14/96 (14%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H     A    A  +     ++ H GFL  +G+KM KS GN +   
Sbjct: 262 PINLHLIGKDILRFHAVYWPAMLLSA-GLPLPERVFGH-GFLTKDGQKMGKSLGNTL--- 316

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
                     + + +  +R   L     + I+F   
Sbjct: 317 ----DPVSLVQRYGSDAVRYYFL-----KEIEFGKD 343


>gi|229043950|ref|ZP_04191644.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676]
 gi|228725390|gb|EEL76653.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH676]
          Length = 607

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 108 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 167

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 168 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 213


>gi|227877331|ref|ZP_03995404.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256842893|ref|ZP_05548381.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|293381727|ref|ZP_06627708.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|312977589|ref|ZP_07789336.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
 gi|227863187|gb|EEJ70633.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
 gi|256614313|gb|EEU19514.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
 gi|290921774|gb|EFD98795.1| isoleucine--tRNA ligase [Lactobacillus crispatus 214-1]
 gi|310895328|gb|EFQ44395.1| isoleucine--tRNA ligase [Lactobacillus crispatus CTV-05]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQ 85
           GP   +   H+G+A   I  D++ R                   +  ++ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLP-VEQQLAKQGVDRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
                   +       +  Q+ + D  RL  +A    P  T   +   Q I +   +   
Sbjct: 114 TMDRAKYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGLKPVY 184



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 575 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y DL +V     
Sbjct: 628 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYADLRSVDQYME 687

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L ++    +D          +   
Sbjct: 688 VKLNDLVKDCLAAYDKFDFTTVFKKVFNF 716


>gi|225858409|ref|YP_002739919.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
 gi|225720884|gb|ACO16738.1| valyl-tRNA synthetase [Streptococcus pneumoniae 70585]
          Length = 883

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EG KMSKS GN I   ++++  
Sbjct: 479 TGYDIIFFWVSRMIFQSLEFTGRQPFQNVLIHGLIRDEEGCKMSKSLGNGIDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 +    +R  +        + + F+ +++  +   ++K 
Sbjct: 537 -----KYGTDSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|148284148|ref|YP_001248238.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
 gi|166225525|sp|A5CCE0|SYV_ORITB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
          ligase; Short=ValRS
 gi|146739587|emb|CAM79339.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
          Length = 854

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
          PTV    HIG+A   I  D + R  R   
Sbjct: 46 PTVSGDLHIGHAMSFIQLDCIVRYQRMLG 74


>gi|254251693|ref|ZP_04945011.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
 gi|124894302|gb|EAY68182.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
          Length = 901

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 488 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 545

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 546 T------GLNPEWLRYYF 557



 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 8/85 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V Y+         ++ RA +E            
Sbjct: 214 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYIGADDTHGTPVMLRAEKEGL------TPKQ 265

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQP 123
           +  +   +  +D             
Sbjct: 266 LIERVWAEHKRDFDSFGVSFDNFYT 290


>gi|315185987|gb|EFU19751.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
          Length = 809

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 43/148 (29%), Gaps = 18/148 (12%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFA---HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
             +     P   R YV     Y  A   H+G+       D+  R LR    +  V +   
Sbjct: 26  KED--PSVPREKRRYVLDMFPYPSAEGLHVGHPEGYTATDIYCRYLRMRGYQ--VLHPMG 81

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
                      A      I       I T +N  +F K    L       +  AT H P+
Sbjct: 82  FDSFGLPAEIYA------ITTGTHPRITTERNINRFRKQIQSLGFSYDWDREIAT-HRPE 134

Query: 132 MIYLIQ----NIILHGHAYEANNEIIFD 155
                Q     +   G AY A   + F 
Sbjct: 135 YYKWTQWMFLKMYEMGLAYMAEVPVWFC 162


>gi|284164098|ref|YP_003402377.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284013753|gb|ADB59704.1| methionyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 705

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 46/152 (30%), Gaps = 19/152 (12%)

Query: 14  KITEFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
              EF    P+ +    CG P      HIG+ R  I  D   R L     E    YV   
Sbjct: 4   STDEFPTDQPAVV---TCGLPYANGDLHIGHLRGYIGADAFSRALETLGQE--TAYVCGS 58

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP----THQPRATNH 128
                 +   A Q+                  +Q+ +   +          TH    T  
Sbjct: 59  DMHGTPVAVNAEQQ------GVDPEDFALDWHEQYEETFPQFNVEFDNYGHTHDETNTEL 112

Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
             ++   ++ +   G+ YE   ++ +D  +  
Sbjct: 113 TQEI---VRTLDEEGYIYEKEIQVAYDPDADQ 141


>gi|262045859|ref|ZP_06018823.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
 gi|260573818|gb|EEX30374.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQ 85
           GP   +   H+G+A   I  D++ R                   +  ++ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLP-VEQQLAKQGVDRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
                   +       +  Q+ + D  RL  +A    P  T   +   Q I +   +   
Sbjct: 114 TMDRAKYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGLKPVY 184



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 575 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y DL +V     
Sbjct: 628 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYADLRSVDQYME 687

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L ++    +D          +   
Sbjct: 688 VKLNDLVKDCLAAYDKFDFTTVFKKVFNF 716


>gi|229150434|ref|ZP_04278650.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550]
 gi|228632927|gb|EEK89540.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus m1550]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|163782529|ref|ZP_02177526.1| glutamyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882102|gb|EDP75609.1| glutamyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 471

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 35/115 (30%), Gaps = 27/115 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P+   + H+GNAR  I   +  R            +V  I D D +   R  +E      
Sbjct: 8   PSPTGYLHLGNARTAIFSYLFARH-------NGGEFVLRIEDTDRERSRREYEEML---- 56

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                          +KD   L         R +         ++ ++  GHAY 
Sbjct: 57  ---------------LKDLEWLGMEWDEFY-RQSERFDIYREYVEKLLQSGHAYP 95


>gi|41615024|ref|NP_963522.1| hypothetical protein NEQ230 [Nanoarchaeum equitans Kin4-M]
 gi|40068748|gb|AAR39083.1| NEQ230 [Nanoarchaeum equitans Kin4-M]
          Length = 1016

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 7/60 (11%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   N+++    L+ +GRKMSKS GNFI   EL+E        + A  +RL  +  
Sbjct: 639 YTNQSPYKNVYVSGFVLDEQGRKMSKSLGNFIYARELME-------KYGADAVRLFTIQA 691


>gi|323489964|ref|ZP_08095185.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323396260|gb|EGA89085.1| valyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 877

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 37/97 (38%), Gaps = 12/97 (12%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q+      +   ++ IH    + EGRKMSKS GN +   +++         + A  +R
Sbjct: 493 IFQALEFTGEKPFKDVLIHGLVRDAEGRKMSKSLGNGVDPMDVIS-------QYGADSLR 545

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
             +       P   + ++  ++       +K    S 
Sbjct: 546 YFLATAS--SPGQDLRYSNDKVESVWNFANKIWNASR 580


>gi|315303316|ref|ZP_07873947.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313628314|gb|EFR96816.1| valyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 882

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 485 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDAEGRKMSKSLGNGVDPIEVID-- 542

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 543 -----KYGADSLRYTLATGS--SPGQDLKFSFEKVESTWNFINKIWNASR 585


>gi|284047776|ref|YP_003398115.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283951997|gb|ADB46800.1| valyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 884

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I         E   +++IH    + +GRKMSKS GN I   E++
Sbjct: 485 VLVTGYDIIFFWVARMITMGEEFMGKEPFKHVFIHGLVRDEQGRKMSKSLGNGIDPVEVV 544

Query: 293 ETKKFGGRSWPAPVIRLAMLMT 314
                    + A  +R  ++  
Sbjct: 545 N-------QYGADTLRFMLITG 559


>gi|242310533|ref|ZP_04809688.1| valyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239522931|gb|EEQ62797.1| valyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 887

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 37/84 (44%), Gaps = 10/84 (11%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYR 317
              NI++H    +  G+KMSKS GN +   EL+E        + A V+R  +  L    R
Sbjct: 526 PFPNIYLHALVRDENGQKMSKSKGNVVDPLELIE-------KYSADVLRFTLATLCAQGR 578

Query: 318 EPIDFTVQRLTEAEILLSKWPQTS 341
             +  +  +L  ++   +K    +
Sbjct: 579 -DVKLSSNQLEISKNFTNKLYNAT 601


>gi|113868900|ref|YP_727389.1| methionyl-tRNA synthetase [Ralstonia eutropha H16]
 gi|122946656|sp|Q0K7K0|SYM_RALEH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|113527676|emb|CAJ94021.1| Methionyl-tRNA synthetase [Ralstonia eutropha H16]
          Length = 686

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 294 HFIGKDILYFHTLFWPAMLR-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYVD 351

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ +++ L 
Sbjct: 352 T------GMNPEWLRYYFAAK-----LNASMEDLD 375


>gi|42567891|ref|NP_568337.3| EMB2247 (embryo defective 2247); ATP binding / aminoacyl-tRNA
           ligase/ nucleotide binding / valine-tRNA ligase
           [Arabidopsis thaliana]
          Length = 970

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  +++++H    + +GRKMSKS GN I   + +       + +    +R  + + 
Sbjct: 572 FTGTVPFSHVYLHGLIRDSQGRKMSKSLGNVIDPLDTI-------KDFGTDALRFTIALG 624

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              + ++ + +RLT  +   +K    
Sbjct: 625 TAGQDLNLSTERLTANKAFTNKLWNA 650


>gi|30020298|ref|NP_831929.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|29895848|gb|AAP09130.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus cereus
           ATCC 14579]
          Length = 1035

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 536 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 595

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 596 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 641


>gi|330859356|emb|CBX69702.1| methionyl-tRNA synthetase [Yersinia enterocolitica W22703]
          Length = 675

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A      +       A   I+ + ++   ++++  
Sbjct: 400 INKRFAGKLADHLADPALYKTFTDAATSIADAYSNRESSKAIREIMALADIANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|310790083|gb|EFQ25616.1| isoleucyl-tRNA synthetase [Glomerella graminicola M1.001]
          Length = 947

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 48/237 (20%), Positives = 82/237 (34%), Gaps = 48/237 (20%)

Query: 194 WKRSTPMEPGWESPWGRG--RPG------WH------IECSAMSSHYLGKVFDIHGGG-L 238
           W    P EP W +P  +G  R G      W        E +  +  YL +  D H G   
Sbjct: 503 WFSDAPDEPAWVAPSLKGQFRRGTDTMDVWFDSGSSWTESNGQADVYL-EGSDQHRGWFQ 561

Query: 239 DLIFPHHENEIAQSCCADRIEK---TANIWIHNGFLNLEGRKMSKSNGNFITINELLE-- 293
             +  +   + A+S  A R++       +  H   L+  G+KMSKS GN IT  ++++  
Sbjct: 562 SSLLSYVAAQRAESDGATRVQPKSPFNTLITHGFTLDQAGKKMSKSIGNTITPAQIMDGT 621

Query: 294 --------------TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
                                +     +RL +  + Y + +      L     +L K+  
Sbjct: 622 LLPPIKVRGKAKVAGAGPTYEALGPDALRLWVASSEYTKDVAVGQAVLKSVHTILVKYRT 681

Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL---ARESTKNHDLLPIFNAS 388
                T +       A  +AL +      A+  L  +     ++   H+    FNA 
Sbjct: 682 IIKMLTGSMHESARTAPTTALDH-----IALMQLKDVTEEVHQAFAAHEFYKAFNAL 733


>gi|257427267|ref|ZP_05603668.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275918|gb|EEV07386.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 657

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTEERHKHVVEQVF--ERLLKQGDIYLGKYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|228939323|ref|ZP_04101915.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228972201|ref|ZP_04132816.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978816|ref|ZP_04139185.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228780892|gb|EEM29101.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
 gi|228787514|gb|EEM35478.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820347|gb|EEM66380.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326939899|gb|AEA15795.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229069741|ref|ZP_04203026.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185]
 gi|228713362|gb|EEL65252.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus F65185]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229079379|ref|ZP_04211921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
 gi|228703912|gb|EEL56356.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229144806|ref|ZP_04273203.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296502780|ref|YP_003664480.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
 gi|228638528|gb|EEK94961.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
 gi|296323832|gb|ADH06760.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis BMB171]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|284033606|ref|YP_003383537.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
 gi|283812899|gb|ADB34738.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
          Length = 523

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 35/177 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +     ++ H G+L + G KMSKS    I   E+
Sbjct: 260 DVHLVGKDILRFHAVIWPAMLIAA-GMPVPKQVFAH-GWLLVGGEKMSKSKLTAIAPKEI 317

Query: 292 LETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEA----------------EILL 334
            +        + +   R   L T  +     F+ + L                     ++
Sbjct: 318 TD-------HFGSDAFRYYFLRTIQFGADGSFSWEHLNAVYTSELANGLGNLASRIAAMV 370

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
            K+      +         AL +          L +    + +  D L   +A A +
Sbjct: 371 GKYFDGELPEPTDHGPAEQALAD---------KLAETVAAADRAIDTLAFHDALAAV 418



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 10/120 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   +  DVL R        K   Y+    +  +K++  A+ +   +   +    
Sbjct: 20  PHIGSAYTTVAGDVLTRWHAQRGERKW--YLTGTDEHGEKVLRSAQAQG--MSPQEWTDK 75

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +  +    D      +A     R T   H  ++   +Q +   G  Y+   E ++  
Sbjct: 76  LVEQAWKPAWVDVD----IAYDDFIRTTEPRHTERVQEFVQALYDQGDVYKGEYEGLYCV 131


>gi|207742639|ref|YP_002259031.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum IPO1609]
 gi|206594033|emb|CAQ60960.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum IPO1609]
          Length = 688

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 293 HFIGKDILYFHTLFWPAMLR-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 350

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 351 T------GLNPEWLRYYFAAK-----LNATMEDLD 374



 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 16/114 (14%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+    I  D+  R  R    E  + YV         ++ RA +E  
Sbjct: 14  YANGP-----IHIGHMVEYIQTDIWVRFQRMRGHE--IYYVGADDTHGTPVMLRAEKE-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                     +  +   +  +D          +   +T+   +   L + + L 
Sbjct: 65  ----GITPRQLIERVWTEHKRDFDNFLVSFDNYY--STDS-DENRELCERVYLK 111


>gi|194866776|ref|XP_001971943.1| GG15248 [Drosophila erecta]
 gi|190653726|gb|EDV50969.1| GG15248 [Drosophila erecta]
          Length = 870

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 51/176 (28%), Gaps = 21/176 (11%)

Query: 18  FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F   D S  + YV     Y     H+G+ R   + D + R  R     K V         
Sbjct: 55  FNPKD-SKDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCG--KNVFQPMGWDSF 111

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
                  A Q           +  T +N  Q  +   RL C    +   +T   P+    
Sbjct: 112 GLPAENAANQRGVE------PASWTEQNIAQMKEQLKRLGCSFDWNHELSTCS-PKYYKW 164

Query: 136 IQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            Q     +  HG AY+    +              +  ++D      R   K  KK
Sbjct: 165 TQHLFLMLHRHGLAYQNEALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|218897179|ref|YP_002445590.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
 gi|218541652|gb|ACK94046.1| isoleucyl-tRNA synthetase [Bacillus cereus G9842]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|163783161|ref|ZP_02178155.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881495|gb|EDP75005.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 581

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     H+G+ R  +V D L RL R+Y       Y  N
Sbjct: 123 PT--GPLHLGHGRGAVVGDTLARLFRFYGYNVTREYYIN 159



 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 27/53 (50%), Gaps = 7/53 (13%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           KMSK  GNF+T+ EL++          A  +RL  L      P+DF V R+ E
Sbjct: 404 KMSKRAGNFVTLRELVDEVG-------ADAVRLVFLTKRSDTPLDFDVDRVKE 449


>gi|124024122|ref|YP_001018429.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
 gi|123964408|gb|ABM79164.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
          Length = 1370

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252  SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
            S   +       +  H   L+ +GRKMSKS GN +    +++  K   +   + A V+RL
Sbjct: 1002 SVAINSQAPYRQVLTHGFALDEKGRKMSKSLGNVVDPAVIIDGGKNQKQEPPYGADVLRL 1061

Query: 310  AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +    Y   +      L +   +  K   TS 
Sbjct: 1062 WVSSVDYSADVPIGTSILRQIADVYRKVRNTSR 1094


>gi|11498815|ref|NP_070044.1| lysyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
 gi|3183169|sp|O29052|SYK_ARCFU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
           ligase; Short=LysRS
 gi|2649372|gb|AAB90029.1| lysyl-tRNA synthetase (lysS) [Archaeoglobus fulgidus DSM 4304]
          Length = 493

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 29/99 (29%), Gaps = 19/99 (19%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           G +     H+GN R M+  D + R L    GE  + Y+      DD    R R       
Sbjct: 23  GISPSGHIHLGNLREMVTADAIRRALLDAGGEAKIVYIA-----DDFDPLRRRYPFLPEE 77

Query: 92  IND--------------AISIITSKNTQQFVKDTTRLAC 116
             +                   +    Q F++    L  
Sbjct: 78  YENYVGMPLCKIPDPEGCHDSYSEHFLQPFLESLEILGI 116


>gi|75760445|ref|ZP_00740486.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|74492070|gb|EAO55245.1| Isoleucyl-tRNA synthetase, mupirocin resistant [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|312378179|gb|EFR24821.1| hypothetical protein AND_10338 [Anopheles darlingi]
          Length = 830

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +        I++H   ++  G KMSKS GN I+ + ++         +   V+R  +
Sbjct: 628 SVASRGKAPYKAIFVHGFAVDENGMKMSKSLGNIISPSSIIT-------KYGCDVLRWWV 680

Query: 312 LMT 314
              
Sbjct: 681 CSH 683


>gi|253315868|ref|ZP_04839081.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
          Length = 734

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 453 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 512

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 513 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 565

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 566 NEDGTLSSKIVT 577


>gi|228900803|ref|ZP_04065018.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
 gi|228858729|gb|EEN03174.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|228920925|ref|ZP_04084263.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838714|gb|EEM84017.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|209549396|ref|YP_002281313.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209535152|gb|ACI55087.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 516

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     + V ++    +   K+ + AR E            
Sbjct: 20  PHIGHAYELIATDAMARYQRLDG--RDVFFLTGTDEHGQKMQQTARAE------GITAQA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +N+ +F +   +L   +     R T 
Sbjct: 72  LADRNSGEF-QAMAKLLNASNDDFIRTTQ 99


>gi|218232538|ref|YP_002366903.1| isoleucyl-tRNA synthetase [Bacillus cereus B4264]
 gi|218160495|gb|ACK60487.1| isoleucine--tRNA ligase [Bacillus cereus B4264]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|40063564|gb|AAR38353.1| valyl-tRNA synthetase [uncultured marine bacterium 582]
          Length = 965

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 69/196 (35%), Gaps = 50/196 (25%)

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           W  G  GW  +  A+   Y     D+   G D++F      +         +    +++H
Sbjct: 546 WPIGTLGWPDQTDAL-EKYF--PTDVLITGQDILFFWVARMMMMQQAVVDKDPFHTVYLH 602

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-----------LMT-- 314
               + +G KMSK+ GN I   E+++        + A  +R  M           L    
Sbjct: 603 QLVRDEKGHKMSKTKGNVIDPLEIVD-------EFGADALRFTMTQMAAIGGVLKLSVDR 655

Query: 315 --HYREPIDF------------------TVQRLTEAEILLSKW--PQTSTSKGIIDPAVL 352
              YR   +F                     R+  A+  +++W   +T+  +  +D A+ 
Sbjct: 656 IKGYR---NFGTKLWNAARFAEMNHAFGGDGRIPAAQATVNRWIIGETAKVREEVDAALA 712

Query: 353 SALYNDLNTVSAIQAL 368
           +  +ND    +A+   
Sbjct: 713 AYRFND--AANALYVF 726


>gi|229127608|ref|ZP_04256597.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
 gi|84029507|sp|Q81E30|SYI2_BACCR RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|228655685|gb|EEL11534.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|103488497|ref|YP_618058.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|123078012|sp|Q1GNP7|SYL_SPHAL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|98978574|gb|ABF54725.1| leucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 849

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 48/141 (34%), Gaps = 37/141 (26%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEI 332
           KMSKS  N +  + +L+        + A  +R  ML      P    + ++   +  A  
Sbjct: 620 KMSKSKKNVVDPDAILD-------QYGADAVRWFMLS---DSPPERDLPWSEAGIEGAWR 669

Query: 333 LLSK-WPQTSTSKGIID------------------PAVLSALYNDLNTVSAIQALHKLAR 373
            + + W     ++ + D                   A + AL    N   A+  +H LA 
Sbjct: 670 FVQRLWRLFGETENVGDGGEDKGLARKLHQTIAGVAADIEALG--FN--KAVAKIHALAN 725

Query: 374 ESTKNHDLLPIFNASAHILGI 394
           E  K         A A ++ +
Sbjct: 726 EIEKAKPSATRAEACAKLILL 746


>gi|318604995|emb|CBY26493.1| methionyl-tRNA synthetase [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 616

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI     L 
Sbjct: 232 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 288

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 289 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 340

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  +     A      +       A   I+ + ++   ++++  
Sbjct: 341 INKRFAGKLADHLADPALYKTFTDAATSIADTYSNRESSKAIREIMALADIANRYVDEQA 400

Query: 406 SIAIEK 411
              + K
Sbjct: 401 PWVVAK 406


>gi|317146470|ref|XP_003189811.1| hypothetical protein AOR_1_1870144 [Aspergillus oryzae RIB40]
          Length = 343

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 69/259 (26%), Gaps = 91/259 (35%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRL-AMLMTHYREPIDFTVQRLTEAEILLSK 336
           MSKS  NF T+   L+        W    +R+  +L        D + Q +   +     
Sbjct: 1   MSKSLKNFATVRSALDKGD-----WNPRSLRIVFLLGVK-----DSSSQGV-APDGSSDP 49

Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES---------TKNHDLLPIFNA 387
               + +       V     +  +T   +  + +L              +  +L      
Sbjct: 50  IISLAQALATAKEKVHEYFCDSFDTPKVMGVISELITTFNNVDQNANPNEVQELAQWVTR 109

Query: 388 SAHILGI---------------------------------EVCKEHLNKNISIAIEKL-- 412
              ILG+                                 +  +E       +  ++L  
Sbjct: 110 IVTILGLNGKVSPESCGIGWEGTDIPEPAKQFLYPLSAMRDALREATKSQGEVTHQQLKA 169

Query: 413 ------VQERLILLKM-------KKF--------------------SSADYIRK-QLESK 438
                 V ERL+           + F                    S  D +R  +L   
Sbjct: 170 ITAETIVDERLVSQASRPYFQVFRDFHARISPSNSEDTPTSSKELLSLCDRLRDVELFDL 229

Query: 439 GFILEDYKN-PDNGQRMTR 456
           G  LED +N P   + +TR
Sbjct: 230 GIYLEDRENKPALVRPVTR 248


>gi|256848733|ref|ZP_05554167.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
 gi|256714272|gb|EEU29259.1| isoleucyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 10/131 (7%)

Query: 32  GPTVYD-FAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQ 85
           GP   +   H+G+A   I  D++ R                   +  ++ ++ ++   R+
Sbjct: 55  GPPFANGNIHMGHALNKISKDIIVRYKNMNGYYAPYVPGWDTHGLP-VEQQLAKQGVDRK 113

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILH 142
                   +       +  Q+ + D  RL  +A    P  T   +   Q I +   +   
Sbjct: 114 TMDRAKYRELCRQYAEEQVQKQMADFKRLGVMADWDNPYITLQHDFEAQEIRVFGEMYKK 173

Query: 143 GHAYEANNEII 153
           G+ Y+    + 
Sbjct: 174 GYIYKGLKPVY 184



 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 13/149 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 575 SVAVTGKAPYKEVLSQGFVLDDKGHKMSKSLGNVISPNDVI-------KKMGAEIIRLWV 627

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L ++     K   T      +    DP      Y DL +V     
Sbjct: 628 AQADTTSDVAVSMGILQQSAESYRKIRNTFRYMLANTSDFDPKENRVAYADLRSVDQYME 687

Query: 368 --LHKLARESTKNHDLLPIFNASAHILGI 394
             L+ L ++    +D          +   
Sbjct: 688 VKLNDLVKDCLAAYDKFDFTTVFKKVFNF 716


>gi|223986361|ref|ZP_03636368.1| hypothetical protein HOLDEFILI_03679 [Holdemania filiformis DSM
           12042]
 gi|223961652|gb|EEF66157.1| hypothetical protein HOLDEFILI_03679 [Holdemania filiformis DSM
           12042]
          Length = 567

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 41/120 (34%), Gaps = 7/120 (5%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           AM    LG   D++  G D       + +              +  H   ++ +G KMSK
Sbjct: 195 AMIERGLGYPADLYFEGSDQYRGWFNSSLIVGTAVHGQAPYKQVLSHGFVMDGKGVKMSK 254

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           S  N +   E+        + + A ++RL      Y+     + + L +      K   T
Sbjct: 255 SQWNAVAPGEIT-------KKYGADILRLWAASVDYQADCSMSEEILKQISENYRKVRNT 307


>gi|195428976|ref|XP_002062540.1| GK16600 [Drosophila willistoni]
 gi|194158625|gb|EDW73526.1| GK16600 [Drosophila willistoni]
          Length = 877

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 45/159 (28%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R           +N+             E+ +   
Sbjct: 71  PYPSGNLHMGHVRVYTISDAVARFHRMCG--------KNVFQPIGWDSFGLPAENAANQR 122

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEA 148
               S  T +N  Q  +   RL C        +T   P+     Q     +   G AY+ 
Sbjct: 123 GVEPSQWTDQNISQMKQQLERLGCSFDWSHELSTCS-PKYYKWTQKLFLMLHQQGLAYQN 181

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D      R   K  KK
Sbjct: 182 EALVNWDPVDQT----VLADEQVDANGCSWRSGVKVEKK 216


>gi|188533617|ref|YP_001907414.1| arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238691998|sp|B2VJB6|SYR_ERWT9 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|188028659|emb|CAO96521.1| Arginyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 576

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 36/119 (30%), Gaps = 4/119 (3%)

Query: 11  LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           L         + P  + +    P V    H+G+ R  I+ D   R L +      V    
Sbjct: 100 LTAPKLGVAPVAPKTVVIDYSAPNVAKEMHVGHVRSTIIGDAAARTLEFLG--HKVIRAN 157

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           ++ D   +               +    I   + + F ++  R     P    RA  ++
Sbjct: 158 HVGDWGTQFGMLIAFLEKQQS--EHHEAIALADLEAFYREAKRTYDEDPAFAERARGYV 214


>gi|187918124|ref|YP_001883687.1| leucyl-tRNA synthetase [Borrelia hermsii DAH]
 gi|238689284|sp|B2RZW1|SYL_BORHD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119860972|gb|AAX16767.1| leucyl-tRNA synthetase [Borrelia hermsii DAH]
          Length = 842

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 52/175 (29%), Gaps = 23/175 (13%)

Query: 20  AIDPSNIRMYVCGPTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              P   R+Y+     Y   +  H+G+       D+L R          V +        
Sbjct: 29  PNIPKEKRIYILDMFPYPSANGLHVGHPEGYTATDILTRY--KLLNGFNVLHPIGFDSFG 86

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQPRATNHIPQMIYL 135
                 A      I   +    IT KN ++F +    L        + R  +        
Sbjct: 87  LPAENYA------IQTGEHPKKITEKNIKKFKEQIKALGFAYDWDREIRTHD--ENYYKW 138

Query: 136 IQ----NIILHGHAYEANNEIIFDTSSIPNYGS-FSRRKIDEQKMGTRVPEKYHK 185
            Q     +   G AY     + +     P+ G+  S  ++ +   G R    +HK
Sbjct: 139 TQWIFLKLYKKGLAYTKEMPVWYC----PDLGTVLSNEEVIQTPDGPRSERGFHK 189


>gi|66793366|ref|NP_001019409.1| bifunctional aminoacyl-tRNA synthetase [Rattus norvegicus]
 gi|37654316|gb|AAQ96263.1| LRRGT00050 [Rattus norvegicus]
          Length = 1486

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 27/113 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L ++Y        +    D + +  +               
Sbjct: 226 GYLHIGHAKAAL-------LNQHYQVNFKGKLIMRFDDTNPEKEK--------------- 263

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                   +  ++D   L    P      ++H   ++   + +I  G AY  +
Sbjct: 264 ----EDFEKVILEDVAMLHIK-PDQFTYTSDHFETIMKYAEKLIEEGKAYVDD 311


>gi|58617028|ref|YP_196227.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|81311361|sp|Q5FHG5|SYL_EHRRG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|58416640|emb|CAI27753.1| Leucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 830

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 52/126 (41%), Gaps = 19/126 (15%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N + ++++++        + A   RL +L  T     I++  + +      L
Sbjct: 591 EKMSKSKKNVVHLDDIID-------KYGADSARLFILSDTPPERDIEWLDENIEGVSRYL 643

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNHD------LLPIFN 386
           +K  +       I+   +   +ND+  + V     +HK+  + T + +       +  F 
Sbjct: 644 NKLWKMIVDYDQIEQNFV---FNDISNDAVEYRMNVHKILNDITNDLEFYRFNCAVAKFR 700

Query: 387 ASAHIL 392
             ++++
Sbjct: 701 ELSNVI 706


>gi|239833544|ref|ZP_04681872.1| isoleucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
 gi|239821607|gb|EEQ93176.1| isoleucyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
          Length = 980

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 605 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 664

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 665 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 712

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    + L                +  L ++ R      D   I       + 
Sbjct: 713 TLAHDEGENVAHAEL------PELERLMLHRLTELDEIVRSGYDAFDFKRIARTLIDFMN 766

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 767 VELSAFYFD 775


>gi|289209715|ref|YP_003461781.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
 gi|288945346|gb|ADC73045.1| isoleucyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
          Length = 948

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 7/115 (6%)

Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
           G   D+   G D      ++ +  S           +  H   ++ +G KMSKS GN + 
Sbjct: 560 GLPVDLFLEGSDQHRGWFQSSLLTSVAMRGEAPYRAVLTHGFTVDEKGEKMSKSRGNVVA 619

Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             E++ T         A ++RL +  T +   +  +   L        +   T+ 
Sbjct: 620 PQEVVSTLG-------ADILRLWVAATDFSGEMAISKDILDRTADAYRRIRNTTR 667


>gi|170063637|ref|XP_001867188.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
 gi|167881196|gb|EDS44579.1| bifunctional aminoacyl-tRNA synthetase [Culex quinquefasciatus]
          Length = 1677

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 34/113 (30%), Gaps = 27/113 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +    L +  +  +  K +         DD    +              
Sbjct: 212 GYLHIGHAKAAL----LNQYYQQAFQGKLIMR------FDDTNPAKENV----------- 250

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                   +  ++D   L    P      + +   M+   + ++  G AY  +
Sbjct: 251 -----HYEKVILEDLEMLQIK-PDLFTHTSQYFDLMLDYCERLMKEGKAYVDD 297


>gi|164428683|ref|XP_964746.2| hypothetical protein NCU00920 [Neurospora crassa OR74A]
 gi|157072240|gb|EAA35510.2| hypothetical protein NCU00920 [Neurospora crassa OR74A]
          Length = 962

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 21/123 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW------------ 302
           A  +     +  H   L+  G+KMSKS GN I+ +++++                     
Sbjct: 591 AVGLSPFKTLITHGFTLDKAGKKMSKSLGNIISADQVMDGSLLPPLKVRNKDRDPNAPPP 650

Query: 303 ----PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVLS 353
                   +RL +  + Y   I      L      L+K+       T + +     A L+
Sbjct: 651 KDALGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSMEQSARAAPLT 710

Query: 354 ALY 356
           AL 
Sbjct: 711 ALD 713


>gi|257076729|ref|ZP_05571090.1| leucyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
          Length = 902

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 22/138 (15%)

Query: 237 GLDLI---FPHHENEIA----QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
           G DL     PH  N +A             K     + +G +   G K+SKS GN I++ 
Sbjct: 565 GNDLRITAPPHISNHLAFFIMNHAAIFSGNKLPGGLMISGLVISNGAKISKSKGNVISLL 624

Query: 290 ELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEIL-------LSKWPQTS 341
           E++         + A + RL M         +D+  + ++            L  +   +
Sbjct: 625 EIINR-------YSADIYRLFMAAGADISSLLDWNEKDISSVIKRYSYFIGLLEGYSGDT 677

Query: 342 TSKGIIDPAVLSALYNDL 359
             +G I     S+ Y +L
Sbjct: 678 PGEGYIYDWFRSSFYKNL 695


>gi|49477784|ref|YP_036701.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49329340|gb|AAT59986.1| lysine--tRNA ligase (lysyl-tRNA synthetase) [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 517

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 36/112 (32%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPI-NDAISIITSKNTQQFVKDTTRLACL 117
             R +  +ID   ++     +  IP      +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFVKYIGMPYCDIPDPYRCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|320104232|ref|YP_004179823.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
 gi|319751514|gb|ADV63274.1| methionyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
          Length = 530

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 9/80 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A  IE    ++ H GF+ ++G K SKS GN +  +EL
Sbjct: 259 DVHVIGKDITRFHCVIWPAMLMSA-GIEPPRRVFGH-GFVYVKGAKASKSQGNVVDPHEL 316

Query: 292 LETKKFGGRSWPAPVIRLAM 311
                   + + +  +R   
Sbjct: 317 -------TQRFGSDAVRYYF 329


>gi|309390229|gb|ADO78109.1| arginyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
          Length = 553

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 56/330 (16%), Positives = 103/330 (31%), Gaps = 70/330 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G++R  +V DV   ++     +    Y  N                     
Sbjct: 137 PT--GPLHVGHSRGAVVGDVTASIMETAGYDVEREYYIN-------------------DA 175

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM---------IYLIQNIILHG 143
            + + I+      ++ +       +       A ++I ++           LI+      
Sbjct: 176 GNQMDILAESTLLRYREILGEEIEMPEDVY--AGDYIKEIAQELYAEYGADLIEKEESKK 233

Query: 144 ------HAYEA-----NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK--KNPAD 190
                 +AY+        ++        N+  FS R +   K+   +     K      +
Sbjct: 234 LEICREYAYQKMLKNIEADLGEFGIEFDNW--FSERSLHPDKIEAAIEILKEKGYIFEEE 291

Query: 191 FILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHE 246
             LW ++T      +       G P +     A     L + FD  I+  G D    HH 
Sbjct: 292 DALWFKATDFGDDKDRVIIKSDGSPTYLAADMAYHLDKLERGFDKLINVWGAD----HHG 347

Query: 247 NEIAQSCC---ADRIEKTANIWIHNGFLNL--EGRK--MSKSNGNFITINELLETKKFGG 299
             I +      A   +      I    + L   G+K  MSK  G+F+T+NE+        
Sbjct: 348 Y-IPRVRAVIEAFGHKPDKLEVIVVQMVTLLRNGKKMPMSKRAGSFVTMNEV-------N 399

Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           +       R   +M      +DF ++   E
Sbjct: 400 KEVGIDAARYYYVMRSTDSHLDFDLELAKE 429


>gi|315586930|gb|ADU41311.1| methionine--tRNA ligase [Helicobacter pylori 35A]
          Length = 650

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 10/136 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-QEHPSIPIN 93
           V D  HIG+A   ++ D L +       E  V ++    +   KI + AR +        
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFFLTGTDEHGQKIEQSARLRNQSPKAYA 70

Query: 94  DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
           D+IS I       F  D         +   +   +  ++      +   G  Y+      
Sbjct: 71  DSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEI------MFEKGDIYKGTYSGY 124

Query: 154 FDTSSIPNYGSFSRRK 169
           +   S  +Y + S+  
Sbjct: 125 YCV-SCESYCAASKMD 139


>gi|303322306|ref|XP_003071146.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240110845|gb|EER29001.1| leucyl-tRNA synthetase, putative [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320040674|gb|EFW22607.1| leucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 984

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/155 (15%), Positives = 43/155 (27%), Gaps = 24/155 (15%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
           H+G+ R   + DVL R  R               D+   +   A     E+ +I      
Sbjct: 86  HMGHVRVYTISDVLARFKRMKGY-----------DVLHPMGWDAFGLPAENAAIERGINP 134

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEI 152
           +  T +N  +  +    L               P+     Q     +   G AY+A   +
Sbjct: 135 ASWTKENIAKMKEQLKGLG-TDFDWDREFMTCSPEFYKHTQRLFLMLHEKGLAYQAKAMV 193

Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                         +  ++D      R      K+
Sbjct: 194 NYDPVDQT----VLANEQVDANGRSWRSGAVVEKR 224


>gi|228958483|ref|ZP_04120203.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228801110|gb|EEM48007.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229109652|ref|ZP_04239238.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
 gi|228673693|gb|EEL28951.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229178578|ref|ZP_04305942.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W]
 gi|228604736|gb|EEK62193.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus 172560W]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|126652388|ref|ZP_01724561.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126590809|gb|EAZ84923.1| isoleucyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 1030

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 32/218 (14%)

Query: 225 HYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
                 F  D+   G+D       + +A S           +      L+  G+KMSKS 
Sbjct: 535 KTFHNQFPADVVIEGIDQTRGFFYSLLAVSTLFTGKPAYKQVLSLGHVLDEHGQKMSKSK 594

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEI----LLS 335
           GN +   EL+E        + A  +R A L+     P +   F+ + + +A+      L 
Sbjct: 595 GNALEPVELIE-------QYGADALRWAFLVDS--SPWNPKRFSKKIVVDAKSKLVDTLE 645

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
              +       ID     A      T      L +     ++ H  + +   +      E
Sbjct: 646 NTFKFYQLYANIDEFTYDATNTGTRTP-----LDQWI--LSRLHHAIQLVTTAMD----E 694

Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFS---SADY 430
               H  + I+  +E+L    +   + + ++   +AD 
Sbjct: 695 YQFTHATREIAQLMEELSNWYIRRSRARFWAHGLTADK 732


>gi|116333117|ref|YP_794644.1| methyonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
 gi|116098464|gb|ABJ63613.1| methionyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
          Length = 677

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 55/158 (34%), Gaps = 40/158 (25%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  +E    ++ H G+L ++  KMSKS GN I    L++        +    +R  ++  
Sbjct: 288 ALGLEMPKELFAH-GWLLMKDGKMSKSKGNVIYPETLVDR-------YGLDALRYYLMRA 339

Query: 315 -HYREPIDFTVQ----------------RLTEAEILLSKW-------PQTSTSKGIIDPA 350
             Y     F+ +                 L     +++K+        Q   ++   D  
Sbjct: 340 MPYGNDGVFSPEDFVDRLNYDLANDLGNLLNRTVAMINKYEGGQLPQYQAGVTEFDADLE 399

Query: 351 VLSA--------LYNDLNTVSAIQALHKLARESTKNHD 380
             +A        L N ++   A+  + KL   S K  D
Sbjct: 400 ATAAAVITNYHDLMNQMHFADALAEIWKLVARSNKYID 437


>gi|255994854|ref|ZP_05427989.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989]
 gi|255993567|gb|EEU03656.1| methionine--tRNA ligase [Eubacterium saphenum ATCC 49989]
          Length = 614

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H  + I  S             + +G++ + G KMSKS GN +    L
Sbjct: 225 DVHLVGKDIIRFH--SIIWPSILMSLGLPLPKKILGHGWVLVGGGKMSKSKGNVVDPRVL 282

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +E        +    ++  +L
Sbjct: 283 IER-------YGTDALKYFLL 296


>gi|207721382|ref|YP_002251823.1| methionyl-trna synthetase [Ralstonia solanacearum MolK2]
 gi|206586541|emb|CAQ17128.1| methionyl-trna synthetase (methionine--trna ligase)(metrs) protein
           [Ralstonia solanacearum MolK2]
          Length = 688

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 293 HFIGKDILYFHTLFWPAMLR-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 350

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 351 T------GLNPEWLRYYFAAK-----LNATMEDLD 374



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 16/114 (14%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+    I  D+  R  R    E  + YV         ++ RA +E  
Sbjct: 14  YANGP-----IHIGHMVEYIQTDIWVRFQRMRGHE--IYYVGADDTHGTPVMLRAEKE-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                     +  +   +  +D          +   +T+   +   L + + L 
Sbjct: 65  ----GITPRQLIERVWTEHKRDFDNFLVSFDNYY--STDS-DENRELCERVYLK 111


>gi|194222442|ref|XP_001917887.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Equus caballus]
          Length = 593

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%), Gaps = 11/65 (16%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L  
Sbjct: 326 GAGMSPPHRIYVHSHW-TVCGQKMSKSLGNVVDPRSCLDR-------YTVDGFRYFLLRQ 377

Query: 315 ---HY 316
              H+
Sbjct: 378 GVPHW 382


>gi|162447112|ref|YP_001620244.1| leucyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
 gi|189082977|sp|A9NET8|SYL_ACHLI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161985219|gb|ABX80868.1| leucyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
          Length = 803

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 52/127 (40%), Gaps = 27/127 (21%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPID----FTVQ 325
           L  +  KMSKS GN ++ ++ +++         A  +RL  M M     P++    ++ +
Sbjct: 575 LGADHSKMSKSKGNSVSPDDFIQSHG-------ADALRLFEMFMG----PLEAEKPWSNE 623

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            L  A+  L +  +       I    + AL             H+  ++ T++++ L   
Sbjct: 624 GLEGAKRFLDRVWRMF--DFEITQQPVDALQ---------TVYHQTVKKVTEDYEKLAFN 672

Query: 386 NASAHIL 392
            A + ++
Sbjct: 673 TAISQMM 679


>gi|126701164|ref|YP_001090061.1| methionyl-tRNA synthetase [Clostridium difficile 630]
 gi|115252601|emb|CAJ70444.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Clostridium difficile]
          Length = 645

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 21/144 (14%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIG+    +  D + R  R+   +  V ++    +  +KI ++
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYD--VKFLTGTDEHGEKIQKK 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRATN--HIPQMIYLIQ 137
           A ++  S                  +KD   L            R T   H   +  +  
Sbjct: 61  AIEQGMSEIE----------YLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFT 110

Query: 138 NIILHGHAY--EANNEIIFDTSSI 159
            +   G  Y  E          S 
Sbjct: 111 KLYEQGDIYKGEYEGRYCTPCESF 134


>gi|87201227|ref|YP_498484.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
 gi|123749671|sp|Q2G3C3|SYL_NOVAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|87136908|gb|ABD27650.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
          Length = 848

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 25/143 (17%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEI 332
           KMSKS  N +  +E++         + A  IR  ML      P    + ++   +     
Sbjct: 625 KMSKSKKNVVDPDEIVA-------KYGADAIRWFMLS---DSPPERDLPWSEAGIEGCAR 674

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI- 391
            + +  +              AL          +  H+       + + L    A A I 
Sbjct: 675 FVQRLWRLFGQYDAAATGEDKALD---------RKAHQTVHAVASDIEALGFNKAVARIY 725

Query: 392 -LGIEVCKEHLNKNISIAIEKLV 413
            L   V K   + + S AI KL+
Sbjct: 726 ELTGAVEKAAPSASRSDAIRKLL 748


>gi|89098946|ref|ZP_01171826.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086350|gb|EAR65471.1| valyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 880

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ IH    + +GRKMSKS GN +   +++   
Sbjct: 484 TGYDIIFFWVSRMIFQGLEFTGERPFKDVLIHGLVRDEQGRKMSKSLGNGVDPMDVIA-- 541

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+++++       +K    S 
Sbjct: 542 -----QYGADSLRYFLSTGS--SPGQDLRFSMEKVEATWNFANKIWNASR 584


>gi|319898377|ref|YP_004158470.1| Isoleucyl-tRNA synthetase [Bartonella clarridgeiae 73]
 gi|319402341|emb|CBI75880.1| Isoleucyl-tRNA synthetase [Bartonella clarridgeiae 73]
          Length = 971

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 7/109 (6%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ + +SC          +  H   L+  G+KMSKS GN I   ++
Sbjct: 598 DIYFEGSDQHRGWFQSSLLESCGTRACSPYKAVVTHGFTLDENGKKMSKSLGNTIMPQDI 657

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           ++T         A + RL ++ T Y E      + L        K    
Sbjct: 658 IKTSG-------ADIFRLWVMTTDYSEDQRLGKKILQTNVDSYRKLRNA 699


>gi|301063341|ref|ZP_07203880.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
 gi|300442504|gb|EFK06730.1| isoleucine--tRNA ligase [delta proteobacterium NaphS2]
          Length = 932

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 48/123 (39%), Gaps = 10/123 (8%)

Query: 220 SAMSSH-YLGKVFDIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           + M +  YL    D++  G D      H + +  S          N+  H   ++ +G+ 
Sbjct: 545 AVMENRPYLDSPADLYLEGSDQHRGWFHSSLLC-SVGTRNQAPYGNVLTHGFVVDGKGKA 603

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           M KS GN I    L+       +S+ A ++RL +    YR+ I  + + L        + 
Sbjct: 604 MHKSAGNVIPPESLI-------KSYGAEILRLWVAGEDYRDNIRLSKEILQRLTDAYRRI 656

Query: 338 PQT 340
             T
Sbjct: 657 RNT 659


>gi|240047288|ref|YP_002960676.1| arginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
 gi|239984860|emb|CAT04851.1| Arginyl-tRNA synthetase [Mycoplasma conjunctivae]
          Length = 518

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT   F H+G+ R  I+ DVL R+L +   +    Y  N
Sbjct: 106 PT--GFLHLGHLRSAIIGDVLARVLEFSGNQVLREYYIN 142


>gi|228907943|ref|ZP_04071794.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
 gi|228851702|gb|EEM96505.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L++        + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVD-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|169836383|ref|ZP_02869571.1| cysteinyl-tRNA synthetase [candidate division TM7 single-cell
          isolate TM7a]
          Length = 53

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)

Query: 50 FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
          FD L R  +Y   E  V YV+N TD+DDKII ++ +E  
Sbjct: 8  FDTLARYFKYKGME--VDYVQNFTDVDDKIINKSIEEGI 44


>gi|281355719|ref|ZP_06242213.1| DNA repair protein RecN [Victivallis vadensis ATCC BAA-548]
 gi|281318599|gb|EFB02619.1| DNA repair protein RecN [Victivallis vadensis ATCC BAA-548]
          Length = 552

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 21/132 (15%)

Query: 317 REPID---FTVQRLTEAEILLS----KWPQTSTSKGIIDPAVLSALYNDLNTV----SAI 365
           R+ ++   +    LTE+E  L+       +   +   ID  +   L  D +T+    +A+
Sbjct: 224 RQVLETAGYLTNALTESENSLADQLGSVYRQLLNLSRIDEKLTEKLLLDCDTIQESINAL 283

Query: 366 QA-LHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM- 422
            + +  LA R       L  I N  + I         L +    ++E+++  R    K  
Sbjct: 284 SSDISDLASRVDLDAEALAAIENRLSDIF-------TLKRRYGPSLEQVLDARDEARKRL 336

Query: 423 KKFSSADYIRKQ 434
           K F+ A   R++
Sbjct: 337 KDFTDARKHREE 348


>gi|147835984|emb|CAN75094.1| hypothetical protein VITISV_024181 [Vitis vinifera]
          Length = 1055

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 11/52 (21%)

Query: 264 IW----IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            W    +  G + L   KMSKS GNF+TI + +       + + A   R ++
Sbjct: 671 YWYPFDMTMGHIMLNSEKMSKSTGNFMTIRQAI-------QEFSADATRFSL 715


>gi|255003795|ref|NP_001157270.1| isoleucyl-tRNA synthetase, mitochondrial [Danio rerio]
          Length = 983

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFT 323
           +H   ++ +G KMSKS GN +  + ++   K    S  + A V+R  +  ++    +   
Sbjct: 622 VHGFAVSEKGEKMSKSIGNVVDPDVVINGGKDSSVSPPYGADVLRWWVAESNVFSEVQIG 681

Query: 324 VQRLTEAEILLSKWPQT 340
              L  A+  ++K   T
Sbjct: 682 PNALNAAKDSINKLRNT 698


>gi|114765738|ref|ZP_01444836.1| leucyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
 gi|114541955|gb|EAU44990.1| leucyl-tRNA synthetase [Roseovarius sp. HTCC2601]
          Length = 856

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 56/177 (31%), Gaps = 36/177 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++         + A   R  +L      P    +++T      A 
Sbjct: 627 AKMSKSKNNVVDPVAIIG-------QYGADTARWFVLS---DSPPERDVEWTASGAEAAN 676

Query: 332 ILLSKWPQTSTSKGIID-----------PAVLSALYN------DLNTVSAIQALHKLARE 374
             LS+  +        D             +  A+++           +AI  L+     
Sbjct: 677 KHLSRVYRACAEIAAGDVPPTGEDEALLREMHKAIHDVTMGVESFGFNAAIARLYAFTNA 736

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV-QERLILLKMKKFSSADY 430
            TK+         +A +L        +  ++S  I +L+  E LI      +  AD 
Sbjct: 737 LTKSRAGTEAKTQAAKVLA--QLMSPMTPHLSEEIWQLLGGEGLIADAA--WPEADE 789


>gi|27884149|emb|CAD61268.1| novel protein similar to human mitochondrial isoleucine tRNA
           synthetase [Danio rerio]
          Length = 982

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 2/77 (2%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFT 323
           +H   ++ +G KMSKS GN +  + ++   K    S  + A V+R  +  ++    +   
Sbjct: 621 VHGFAVSEKGEKMSKSIGNVVDPDVVINGGKDSSVSPPYGADVLRWWVAESNVFSEVQIG 680

Query: 324 VQRLTEAEILLSKWPQT 340
              L  A+  ++K   T
Sbjct: 681 PNALNAAKDSINKLRNT 697


>gi|58389636|ref|XP_317169.2| AGAP008297-PA [Anopheles gambiae str. PEST]
 gi|55237397|gb|EAA12235.2| AGAP008297-PA [Anopheles gambiae str. PEST]
          Length = 1190

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 55/154 (35%), Gaps = 38/154 (24%)

Query: 227 LGKVFDIHGGGLDLIFPHHE----NEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKS 281
                D+   G DLI  H      N +A     A +  K       NG L L   KMSKS
Sbjct: 666 FWYPVDLRVSGKDLIQNHLTFFLYNHVAIWPKDASKWPKGVRC---NGHLLLNSAKMSKS 722

Query: 282 NGNFITI-------------------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           +GNF+T+                    + +E   F   +  A ++RL          I++
Sbjct: 723 DGNFLTLYESIAKFSADGTRLCLADAGDSIEDANFVVTNADAGILRLYTF-------IEW 775

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
             + L  ++ LL K PQ      I D    S + 
Sbjct: 776 VKETL-ASKPLLRKGPQ---DASINDQVFSSEMN 805


>gi|323454274|gb|EGB10144.1| hypothetical protein AURANDRAFT_10097 [Aureococcus anophagefferens]
          Length = 1008

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGG--RSWPAPVIRLAMLMTHYREPIDFTV 324
           H   L+ +G KMSKS GN +    ++E  K       + A V+RL +    Y   +    
Sbjct: 615 HGFVLDEKGFKMSKSLGNVVDPRVVIEGGKNAKVDPPYGADVLRLWVASVDYTADVRLGK 674

Query: 325 QRLTEAEILLSKWPQT 340
             L +      K   T
Sbjct: 675 NALKQVFEQYRKLRNT 690


>gi|317009649|gb|ADU80229.1| methionyl-tRNA synthetase [Helicobacter pylori India7]
          Length = 650

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 43/137 (31%), Gaps = 16/137 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   ++ D L +       E        +T  D+      + E  +   N 
Sbjct: 13  VNDIPHIGHAYTTLIADTLKKYYTLQGEEVFF-----LTGTDEH---GQKIEQSARLRNQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANN 150
           +        +  F         L      R T+   +    +QN    +   G  Y+   
Sbjct: 65  SPKAYADSISAIFKNQWDFFN-LDYDGFIRTTDS--EHQKCVQNAFEIMFEKGDIYKGTY 121

Query: 151 EIIFDTSSIPNYGSFSR 167
              +   S  +Y + S+
Sbjct: 122 SGYYCV-SCESYCAISK 137



 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 29/107 (27%)

Query: 245 HENEIAQSCCADR------IEKTANIW---------------IHNGFLNLEGRKMSKSNG 283
            +N++A   CA        +   A  W                 +G+  +EG KMSKS G
Sbjct: 248 LDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLNLPLFKQLCVHGWWTIEGVKMSKSLG 307

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           N +   +L          +    +R  +L    + +  DF+ + LTE
Sbjct: 308 NVLDAQKL-------AIEYGIEELRYFLLREVPFGQDGDFSKKALTE 347


>gi|294649289|ref|ZP_06726724.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824842|gb|EFF83610.1| leucine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 874

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 43/153 (28%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPSDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +T     +ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLAAGFLETGNQTTVIDTANLSKDAQDLRRKTHETIQKVGDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHIL 392
           I AL +L   + K     ++D      A   +L
Sbjct: 744 IAALMELLNATNKFEAKDDNDAAVAREAITTLL 776


>gi|282896532|ref|ZP_06304552.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281198638|gb|EFA73519.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 533

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 56/180 (31%), Gaps = 23/180 (12%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D + R  R    E     V  IT  D+      + +  +     
Sbjct: 20  VNDVPHIGSAYTTIAADTMARFQRLLGNE-----VIFITGTDEH---GQKIQRSAQSQGK 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      +    F+     L         R T+  H   +      +   G  Y    + 
Sbjct: 72  SPQEFCDQIVPSFIDLWQILNIQY-DRFSRTTDLKHQAIVKEFFNRVWEQGDIYRGEQKG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK----KNPAD--FILWKRSTPMEPGWES 206
            +  S          ++  E   G R P    K    ++  +  F L K   P+E  ++S
Sbjct: 131 WYCVSCEEF------KEERELIEGKRCPIHTTKEVEWRDEQNYFFRLSKYQKPLEEFYQS 184


>gi|257066686|ref|YP_003152942.1| leucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
 gi|256798566|gb|ACV29221.1| leucyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
          Length = 800

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 25/133 (18%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L  + +KMSKS GN I  ++++       R + A  +R   M M  +
Sbjct: 560 KEPYKKRTSHGMILGSDHQKMSKSRGNVINPDDIV-------RDYGADTLRCYEMFMGDF 612

Query: 317 REPIDFTVQRLTEAEILLSKW----------PQTSTSKGIIDPAVLSALYND-----LNT 361
                ++ + +      L +            + S    ++    +  +  D      NT
Sbjct: 613 SSMAIWSDEGVRGCRKYLERVFNLTDLVVDGEEYSKDLEVVINQTIKKVSEDYENLKFNT 672

Query: 362 VSAIQALHKLARE 374
             AI  L  L  E
Sbjct: 673 --AIAKLMTLLNE 683


>gi|226355830|ref|YP_002785570.1| methionine--tRNA ligase [Deinococcus deserti VCD115]
 gi|226317820|gb|ACO45816.1| putative Methionine--tRNA ligase (Methionyl-tRNA synthetase)
           (MetRS) [Deinococcus deserti VCD115]
          Length = 668

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 45/124 (36%), Gaps = 10/124 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              HIG+    I+ D + R  R     K VT+V    +  +KI + A +E  +       
Sbjct: 18  GAPHIGHVYEKILADAIVRYQRLAG--KNVTFVMGTDEHGEKISKAAAKEGLTPQALVDD 75

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
             +     + F     RL     +   R T   H   +  ++Q +   G  Y A  E ++
Sbjct: 76  LSV-----RAFKGLWDRLGISY-SEFIRTTEGRHKRFVQDVLQRVYDSGDIYFAEYEGLY 129

Query: 155 DTSS 158
              +
Sbjct: 130 SVGA 133



 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++ PH          A  +     + +H+  L  +GRKM KS GN I   +L+ 
Sbjct: 261 HVIGKDILKPHAVFWPTMLKAA-GMPVYRKLVVHSHILAEDGRKMGKSLGNAIDPEKLVA 319

Query: 294 TKKFGGRSWPAPVIRLAML 312
                   +P   IR AML
Sbjct: 320 D-------YPVDAIRYAML 331


>gi|116670794|ref|YP_831727.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
 gi|189082980|sp|A0JX57|SYL_ARTS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116610903|gb|ABK03627.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
          Length = 843

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 44/146 (30%), Gaps = 22/146 (15%)

Query: 17  EFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
            F  +D     R YV     Y     H+G+A    + DV+ R LR               
Sbjct: 42  VFTPVDDGSRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGY----------- 90

Query: 74  DIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+   I   +     E+ +I  N   S  T  N         R A  +     R     P
Sbjct: 91  DVLHPIGWDSFGLPAENAAIKRNAHPSEWTYANIDTQAASFKRYAI-SADWSRRLHTSDP 149

Query: 131 QMIYLIQ----NIILHGHAYEANNEI 152
           +     Q         G AY  ++ +
Sbjct: 150 EYYRWTQWLFKRFYERGLAYRKDSPV 175


>gi|71281104|ref|YP_269544.1| methionyl-tRNA synthetase [Colwellia psychrerythraea 34H]
 gi|123733733|sp|Q480H5|SYM_COLP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71146844|gb|AAZ27317.1| methionyl-tRNA synthetase, beta subunit [Colwellia psychrerythraea
           34H]
          Length = 713

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 65/195 (33%), Gaps = 53/195 (27%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A    AD  + TA ++ H GF+ + G KMSKS G FI     L+
Sbjct: 307 HFIGKDIINFHSLFWPAMLEGADFRKPTA-VFAH-GFVTVNGEKMSKSKGTFIKGRTYLD 364

Query: 294 TKKFGGRSWPAPVIRLAMLM--THYREPIDFTVQRLTE----------------AEILLS 335
                        +R       TH  + +D  ++   +                    ++
Sbjct: 365 -------HLNPEYLRYYYATKLTHKIDDLDLNLEDFVQRVNSDLVGKVVNIASRCASFIT 417

Query: 336 KWPQTSTSKGIIDPAVLS--------------------------ALYNDLNTVSAIQALH 369
           K      S  I D A+                            AL + +N   AI+   
Sbjct: 418 KRFDGMLSTNIDDQALADEVMAAGDSIAAHYESRDFGRGMREIMALADKVNEYIAIKEPW 477

Query: 370 KLARESTKNHDLLPI 384
           +L ++ TK  ++  I
Sbjct: 478 QLVKDETKQQEVQDI 492


>gi|42520278|ref|NP_966193.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652693|sp|Q73HY6|SYR_WOLPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|42410016|gb|AAS14127.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 568

 Score = 39.5 bits (91), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 44/157 (28%), Gaps = 46/157 (29%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKI------IERAR 84
           PT     HIG+AR  +  DVL  LL+    +    Y  N     ID  I       + A 
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGYKVTKEYYINDAGAQIDTLIRSVYLRYKEAL 188

Query: 85  QEHPSIPINDAISI--------ITSKN------------TQQF---------VKDTTRLA 115
            E  SI                +  K              + +          +D   L 
Sbjct: 189 GEKISIEKGLYPGEYLKPIGTGLAKKYGAELLEKQDNQVIRDYTLSSILEIIKEDMNLLG 248

Query: 116 CLAPTHQPRATNHI----PQMIYLIQNIILHGHAYEA 148
                H    + +      ++   I+ +   G  YE 
Sbjct: 249 V---NHDVFTSEYELQKSGKIEESIKILSDKGLVYEG 282


>gi|281492830|ref|YP_003354810.1| valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
 gi|281376482|gb|ADA65968.1| Valyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
          Length = 880

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 15/114 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + EGRKMSKS GN I   +++E        +    +R
Sbjct: 492 IFQGLEFTGKSPFKRALIHGLIRDEEGRKMSKSLGNGIDPMDVIE-------KYGTDALR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVLSAL 355
             +        + + F+  ++  A   ++K    S      ++ +   AV SAL
Sbjct: 545 WFLSNGSAP-GQDVRFSYDKMDAAWNFINKIWNVSRYILMNAEDVSADAVSSAL 597


>gi|157364698|ref|YP_001471465.1| leucyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|172045994|sp|A8F8B7|SYL_THELT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157315302|gb|ABV34401.1| leucyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 815

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 14/89 (15%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E   N++   G +  +G KMSKS G
Sbjct: 524 PVDQYVGGVEHAVLHLLYSRFITKVLYDLGYLSFDEPFENLFT-QGMIYKDGAKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML 312
           N ++ +E+++        + A  +R+ +L
Sbjct: 583 NVVSPDEMIDR-------YGADTLRMYIL 604


>gi|154320610|ref|XP_001559621.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
 gi|150853466|gb|EDN28658.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
          Length = 579

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 52/161 (32%), Gaps = 27/161 (16%)

Query: 8   YNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           Y+   +    F          YV  P  Y     H+G+   M++ DV  R          
Sbjct: 39  YSVETKSKKPF----------YVTTPIFYVNAAPHVGHLYTMVLADVFKRWQVLKG---N 85

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
              +   TD     I+RA  +  ++P             + F +   R   L+  H  R 
Sbjct: 86  TAILCTGTDEHGMKIQRAAAQAGALP-----KEFCDIGAETFKELAKRAG-LSNDHFVRT 139

Query: 126 TNHIPQMIYLIQ----NIILHGHAYEANNEIIFDTSSIPNY 162
           T+  P     ++     +    + YE+ +E  +  S    Y
Sbjct: 140 TD--PDHKETVEYIWYMLREREYIYESKHEGWYCVSDETFY 178


>gi|153832665|ref|ZP_01985332.1| chromosome segregation ATPase [Vibrio harveyi HY01]
 gi|148871010|gb|EDL69894.1| chromosome segregation ATPase [Vibrio harveyi HY01]
          Length = 513

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 5/113 (4%)

Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
           EA I    W      +  I  A  +A+   LN  +AI    K  +E  K   L   +   
Sbjct: 221 EAAIANCTWKNVVKMQERIRKAF-TAINQ-LNEPNAISITDKYLKEKLKELQLTYEYREK 278

Query: 389 AHILGIEVCKEHLNKNISIAIEKLV--QERLILLKMKKFSSA-DYIRKQLESK 438
                +E  +          +E  +   E   + + K+F  A D  RK+LE  
Sbjct: 279 KQQEKVEQAEIKAQMREEAKVEAEIKKAEAEAIKEEKRFQKALDTARKELEQA 331


>gi|1174519|sp|P18330|SYI1_PSEFL RecName: Full=Isoleucyl-tRNA synthetase 1; AltName: Full=IleRS-R1;
           AltName: Full=Isoleucine--tRNA ligase 1; Short=IleRS 1
 gi|577085|emb|CAA56431.1| isoleucine-tRNA ligase [Pseudomonas fluorescens]
          Length = 943

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS  N I   ++ +T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDETGRKMSKSLKNVIEPKKINDTLG-------ADIMRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEIAVSDQILARSADAYRRIRNTAR 666


>gi|89097430|ref|ZP_01170319.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
           NRRL B-14911]
 gi|89087726|gb|EAR66838.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
           NRRL B-14911]
          Length = 547

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 11/107 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R    E  V YV         I  RA+ E        +   I
Sbjct: 17  HLGHIASLLPGDILARYYRMKGEE--VLYVSGSDCNGTPIAIRAKHE------GKSAKEI 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGH 144
             +  + F     +L         R  A +H   +  +  +++ +GH
Sbjct: 69  ADRYHRDFAASFEQLGFTY-DLYTRTDAPHHHQTVQEVFLSLLENGH 114


>gi|258423763|ref|ZP_05686649.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845995|gb|EEV70023.1| isoleucyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 917

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651


>gi|227356723|ref|ZP_03841109.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
 gi|227163231|gb|EEI48162.1| methionyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
          Length = 675

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FIT    L+
Sbjct: 291 HFIGKDIVYFHSLFWPAVLEGSEYRKPT-NLFVH-GYVTVNGAKMSKSRGTFITARAYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                   + A  +R  
Sbjct: 349 -------HFDADCLRYY 358


>gi|33864084|ref|NP_895644.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
 gi|81573102|sp|Q7TUN3|SYI_PROMM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33635668|emb|CAE21992.1| t-RNA synthetase, class Ia:Isoleucyl-tRNA synthetase
           [Prochlorococcus marinus str. MIT 9313]
          Length = 968

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+ +GRKMSKS GN +    +++  K   +   + A V+RL
Sbjct: 600 SVAINSQAPYRQVLTHGFALDEKGRKMSKSLGNVVDPAVIIDGGKNQKQEPPYGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   TS 
Sbjct: 660 WVSSVDYSADVPIGASILRQIADVYRKVRNTSR 692


>gi|320547575|ref|ZP_08041860.1| glutamate--tRNA ligase [Streptococcus equinus ATCC 9812]
 gi|320447650|gb|EFW88408.1| glutamate--tRNA ligase [Streptococcus equinus ATCC 9812]
          Length = 485

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 78/456 (17%), Positives = 146/456 (32%), Gaps = 86/456 (18%)

Query: 23  PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---- 77
           P  IR+ Y   PT     HIGNAR  +     Y   R+Y G+    +V  I D D     
Sbjct: 2   PKKIRVRYAPSPT--GLLHIGNARTALF---NYLYARHYGGD----FVIRIEDTDRKRHV 52

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           +  ER++ E+      D       +  +++ +                +  +      I 
Sbjct: 53  EDGERSQLENLKWLGMDWDESP--QTHEKYRQ----------------SERLDIYQKYID 94

Query: 138 NIILHGHA---YEANNEIIFDTSSIPNYGSFSR-----RKIDEQKMGTRVPEKYHKKNPA 189
            ++  G A   Y    E+  +       G   R       + E++    + E+  K    
Sbjct: 95  QLLAEGKAYKSYVTEEELAAERERQEAAGETPRYINEFLGMSEEEKAAYIAERQAKGIIP 154

Query: 190 DFIL---------WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-LGKVFDIHGGGLD 239
              L         W      +  +E   G     W I+       Y    V D H   + 
Sbjct: 155 TVRLAVNESGIYKWHDIVKGDIEFEG--GNVGGDWVIQKKDGYPTYNFAVVIDDHLMEIS 212

Query: 240 LIFP---HHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLET 294
            +     H  N   Q    + +   A  + H   +  +  G+K+SK + N      L   
Sbjct: 213 HVIRGDDHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNT-----LQFI 267

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           + +  + +    +   + +  +    +   F+ + L    I L    + S S    D   
Sbjct: 268 EDYRKKGYMPEAVFNFIALLGWNPGGEDEIFSREEL----IKLFDEHRLSKSPAAFDQKK 323

Query: 352 LSALYN------DLNTVSAIQA--LHKLARESTKNHDLLPI----FNASAHILGI-EVCK 398
           +  + N      D +T+ A+    L +  R + K   L+ +      +   I+ + ++  
Sbjct: 324 MDWMSNEYIKNADFDTIFAMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFF 383

Query: 399 EHLNKNISIAIEKLVQE----RLILLKMKKFSSADY 430
           E   +      E +  E     L   K K  + +D 
Sbjct: 384 EDFPELTDAEKEFMAGETVPTVLEAFKAKLEAMSDE 419


>gi|315282473|ref|ZP_07870879.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
 gi|313613881|gb|EFR87619.1| valyl-tRNA synthetase [Listeria marthii FSL S4-120]
          Length = 883

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDXEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|299535625|ref|ZP_07048946.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298728825|gb|EFI69379.1| valyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 881

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 59/164 (35%), Gaps = 16/164 (9%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ PAD   W +   +   W S   W     GW  E +     Y      +   G D+I
Sbjct: 432 GKEAPADAENWTQDEDVLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLV--TGYDII 489

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + EGRKMSKS GN +   +++E        
Sbjct: 490 FFWVSRMIFQGLEFTDQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIE-------Q 542

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           + A  +R  +       P   + +T +++       +K    S 
Sbjct: 543 YGADSLRYFLATGS--SPGQDLRYTTEKVEAVWNFANKIWNASR 584


>gi|242309749|ref|ZP_04808904.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
 gi|239523750|gb|EEQ63616.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
          Length = 643

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 43/125 (34%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I+ D L R  R    E  V ++    +   KI + A++        +
Sbjct: 14  VNDIPHIGHAYTTIIADTLARFHRLLGDE--VLFLTGTDEHGQKIQQSAQKNGK--NPKE 69

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
            +  I+S+    F                R T+  H      +   +   G  Y+   E 
Sbjct: 70  YVDEISSR----FRNLWDSFGIGY-DWFIRTTDSYHKETAQNVFLKMFQKGDIYKGEYEG 124

Query: 153 IFDTS 157
            +  S
Sbjct: 125 NYCVS 129


>gi|148268236|ref|YP_001247179.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394304|ref|YP_001316979.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257794141|ref|ZP_05643120.1| leucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415845|ref|ZP_05682116.1| leucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258420674|ref|ZP_05683613.1| leucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438324|ref|ZP_05689608.1| leucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443782|ref|ZP_05692121.1| leucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258445993|ref|ZP_05694169.1| leucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258448279|ref|ZP_05696406.1| leucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258454193|ref|ZP_05702164.1| leucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|269203396|ref|YP_003282665.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893252|ref|ZP_06301486.1| leucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282927887|ref|ZP_06335498.1| leucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|295406069|ref|ZP_06815877.1| leucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297245006|ref|ZP_06928883.1| leucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|189083152|sp|A6U2M4|SYL_STAA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083153|sp|A5ITT0|SYL_STAA9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|147741305|gb|ABQ49603.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946756|gb|ABR52692.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|257788113|gb|EEV26453.1| leucyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839438|gb|EEV63911.1| leucyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257843278|gb|EEV67688.1| leucyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848368|gb|EEV72359.1| leucyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851188|gb|EEV75131.1| leucyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257855235|gb|EEV78174.1| leucyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858518|gb|EEV81394.1| leucyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257863645|gb|EEV86402.1| leucyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262075686|gb|ACY11659.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282590397|gb|EFB95476.1| leucyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282764570|gb|EFC04696.1| leucyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|294969066|gb|EFG45087.1| leucyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|297178086|gb|EFH37334.1| leucyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|329727097|gb|EGG63553.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|71911056|ref|YP_282606.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
 gi|71853838|gb|AAZ51861.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTV-SAIQ 366
                   +  +++ L +      K   T      +    +PA  +  Y DL TV   + 
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPATDTVAYADLGTVDKYMT 682

Query: 367 ALHK----LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
            +         ++ + +D + I+ A  + + +++   +L+    +  IE 
Sbjct: 683 IVFNQLVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEA 732


>gi|57652056|ref|YP_186641.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160962|ref|YP_494398.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195572|ref|YP_500378.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221863|ref|YP_001332685.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509976|ref|YP_001575635.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|258452309|ref|ZP_05700322.1| leucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|282925645|ref|ZP_06333294.1| leucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294849919|ref|ZP_06790658.1| leucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304380647|ref|ZP_07363318.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|71153567|sp|Q5HF16|SYL_STAAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123003450|sp|Q2FXH2|SYL_STAA8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|123749601|sp|Q2FFY0|SYL_STAA3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|172048950|sp|A6QHU1|SYL_STAAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|189083154|sp|A8Z4I6|SYL_STAAT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57286242|gb|AAW38336.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126936|gb|ABD21450.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203130|gb|ABD30940.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150374663|dbj|BAF67923.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368785|gb|ABX29756.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257860034|gb|EEV82869.1| leucyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|269941236|emb|CBI49624.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282592425|gb|EFB97439.1| leucyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|294823258|gb|EFG39688.1| leucyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|304340754|gb|EFM06683.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|320140775|gb|EFW32626.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320143786|gb|EFW35560.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|329314433|gb|AEB88846.1| Leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329727013|gb|EGG63470.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLAIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|50914656|ref|YP_060628.1| valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81822714|sp|Q5XAW8|SYV_STRP6 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50903730|gb|AAT87445.1| Valyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 882

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 10/104 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS      +   N+ IH    + EGRKMSKS GN I   +++E  
Sbjct: 478 TGYDIIFFWVSRMIFQSLEFTERQPFQNVLIHGLIRDEEGRKMSKSLGNGIDPMDVIE-- 535

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
                 + A  +R  +        + + F+ +++  +   ++K 
Sbjct: 536 -----KYGADSLRWFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|15924750|ref|NP_372284.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|15927335|ref|NP_374868.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|156980077|ref|YP_001442336.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006546|ref|ZP_05145147.2| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|296276048|ref|ZP_06858555.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|54039680|sp|P67513|SYL_STAAN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|54042038|sp|P67512|SYL_STAAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|166231647|sp|A7X3J9|SYL_STAA1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|13701554|dbj|BAB42847.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|14247532|dbj|BAB57922.1| leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722212|dbj|BAF78629.1| leucyl-rRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|285817440|gb|ADC37927.1| Leucyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|312830136|emb|CBX34978.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R
           2]
 gi|315130602|gb|EFT86588.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
          Length = 804

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 635

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 636 NEDGTLSSKIVT 647


>gi|329733103|gb|EGG69440.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|309775575|ref|ZP_07670575.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916669|gb|EFP62409.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 799

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 53/140 (37%), Gaps = 24/140 (17%)

Query: 258 IEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTH 315
            E    ++ H G  L     KMSKS GN +  ++++E+         A  +R   M M  
Sbjct: 556 KEPFQRLF-HQGMILGENNEKMSKSRGNVVNPDDIVESHG-------ADALRVYEMFMGP 607

Query: 316 YREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDP---AVLSALYND---LNT 361
               + ++   L  A   L +  +        T T+ G +D    A +  + ND   LN 
Sbjct: 608 LEAALPWSTTGLDGARRWLDRVWRLYTEYDKFTETNDGKLDKVYHATVKKVTNDVETLNL 667

Query: 362 VSAIQALHKLARESTKNHDL 381
            +AI  +     E  K   +
Sbjct: 668 NTAISQMMIFINECYKAESI 687


>gi|294783391|ref|ZP_06748715.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
 gi|294480269|gb|EFG28046.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
          Length = 859

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPAVLSALYNDL 359
           A   L++ W     +  ++  A     Y+ L
Sbjct: 658 AYRFLTRVWRLIFENAELVKNAHDEIDYDKL 688


>gi|197106978|ref|YP_002132355.1| leucyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
 gi|254782509|sp|B4RCZ4|SYL_PHEZH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|196480398|gb|ACG79926.1| leucyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
          Length = 867

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 39/138 (28%), Gaps = 13/138 (9%)

Query: 23  PSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P   + YV    P      H+G+ R   + DV+ R  R    +  V +            
Sbjct: 31  PGKRKYYVLEMFPYPSGRLHMGHVRNYALGDVIARYKRAQ--DFSVLHPMGWDAFGLPAE 88

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQ 137
             A      +         T  N  +   +   L       +  AT    +  Q   L  
Sbjct: 89  NAA------MERGVDPKAWTYDNIARMRAELKELGLSIDWSREFATCDVEYYGQQQALFL 142

Query: 138 NIILHGHAYEANNEIIFD 155
            +   G  Y   + + +D
Sbjct: 143 ELFERGLVYRKESVVNWD 160


>gi|190891834|ref|YP_001978376.1| methionyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|190697113|gb|ACE91198.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 516

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     + V ++    +   K+ + AR E            
Sbjct: 20  PHIGHAYELIATDAMARYQRLDG--RDVFFLTGTDEHGQKMQQTARAE------GITAQA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +N+ +F +   +L   +     R T 
Sbjct: 72  LADRNSGEF-QAMAKLLNASNDDFIRTTQ 99



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A        ++ H GFL  +G KMSKS GN +    L
Sbjct: 259 DVHIIGKDIIRFHAVYWPAFLMAAKLPLP-KRVFAH-GFLLNKGEKMSKSLGNVVDPVNL 316

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +         +    +R   L
Sbjct: 317 VN-------HFGLDQVRYFFL 330


>gi|152990758|ref|YP_001356480.1| valyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
 gi|166225524|sp|A6Q3R4|SYV_NITSB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|151422619|dbj|BAF70123.1| valyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
          Length = 871

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 58/171 (33%), Gaps = 25/171 (14%)

Query: 192 ILWKRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
            LW  ST     W    WG+G   W  +       +     D+   G D++F      + 
Sbjct: 457 ALWPFSTLG---WGNGDWGKGV-KWFEDD---LKKFYPN--DLLITGFDILFFWVARMMM 507

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                       ++++H    +  G+KMSKS GN I   + +E        + A  +R  
Sbjct: 508 MGEHFLHKLPFKDVYLHALVRDEHGQKMSKSRGNVIDPIDTIE-------EYSADALRFT 560

Query: 311 M--LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL 359
           +  L    R  I  + +RL       +K    +    I          +DL
Sbjct: 561 LAALAVQGR-DIRLSKERLELYRNFTNKLYNAARFLQIHQEKF-----DDL 605


>gi|323439586|gb|EGA97306.1| leucyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442033|gb|EGA99669.1| leucyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|307294118|ref|ZP_07573962.1| valyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880269|gb|EFN11486.1| valyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 899

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 10/104 (9%)

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           W  G  GW  +   +  HY     D+   G D++F        Q            +++H
Sbjct: 490 WPFGTLGWPEQTETLDRHY---PNDLLISGFDILFFWDARMAMQGLEFMGDVPWRKLYLH 546

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                 +G+KMSKS GN +    L++        + A  +R  M
Sbjct: 547 GLVRAADGQKMSKSKGNVVDPLGLIDR-------FGADALRFFM 583


>gi|302333422|gb|ADL23615.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 804

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 635

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 636 NEDGTLSSKIVT 647


>gi|302332798|gb|ADL22991.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 917

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 9/127 (7%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITDIDDKIIER--ARQEHPSIPIND 94
           H+G+A   I+ D + R                   +  I+  + ++   R++  +    +
Sbjct: 64  HMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP-IEQALTKKGVDRKKMSTAEFRE 122

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNE 151
                  +  +   KD  RL      + P  T    +    I +   +   G  Y+    
Sbjct: 123 KCKEFALEQIELQKKDFRRLGVRGDFNDPYITLKPEYEAAQIRIFGEMADKGLIYKGKKP 182

Query: 152 IIFDTSS 158
           + +  SS
Sbjct: 183 VYWSPSS 189



 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 7/92 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  +     +     +  H   ++ EG+KMSKS GN I  +++++ K        A + R
Sbjct: 567 ITTAVATRGVSPYKFLLSHGFVMDGEGKKMSKSLGNVIVPDQVVKQKG-------ADIAR 619

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           L +  T Y   +  + + L +   +  K   T
Sbjct: 620 LWVSSTDYLADVRISDEILKQTSDVYRKIRNT 651


>gi|301165609|emb|CBW25180.1| valyl-tRNA synthetase [Bacteriovorax marinus SJ]
          Length = 888

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      +  S      +  ++I+IH    +  GRKMSKS GN +   E +E  
Sbjct: 493 TGFDIIFFWVARMMMMSLKVTGEKPFSDIYIHALVRDKLGRKMSKSLGNGLDPLETVE-- 550

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQT 340
                 + A   R  +     Y   ++   +R+      ++K    
Sbjct: 551 -----EYGADAFRFTLAAGSGYNRGLNLDPERIAGYRNFINKIWNA 591


>gi|291532689|emb|CBL05802.1| valyl-tRNA synthetase [Megamonas hypermegale ART12/1]
          Length = 841

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              +++IH    + +GRKMSKS GN I   E++E        + A  +R  ++  +   P
Sbjct: 466 PFKHVFIHGLVRDSQGRKMSKSLGNGIDPVEVIE-------KYGADTLRFMLITGN--TP 516

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +R+  A    +K    S 
Sbjct: 517 GNDMRFYWERVESARNFANKLWNASR 542


>gi|290994685|ref|XP_002679962.1| predicted protein [Naegleria gruberi]
 gi|284093581|gb|EFC47218.1| predicted protein [Naegleria gruberi]
          Length = 648

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 47/162 (29%), Gaps = 22/162 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+ R   + D++ R  +               ++       A     E+ +
Sbjct: 19  PYPSGNLHMGHVRVYTISDLIARTHKMLGY-----------NVIHPFGFDAFGLPAENAA 67

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHA 145
           I    + +  T KN     +    L       +       P+     Q     +   G A
Sbjct: 68  IERGVSPADWTHKNIAHMKEQIKALDF-DFDWEREVITCNPEYYKWTQWLFLQLHKKGLA 126

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           Y+    + +D          +  ++D Q    R      +KN
Sbjct: 127 YQQEALVNWDPIDNT---VLANEQVDSQGRSWRSGALVERKN 165


>gi|255102750|ref|ZP_05331727.1| methionyl-tRNA synthetase [Clostridium difficile QCD-63q42]
 gi|255308571|ref|ZP_05352742.1| methionyl-tRNA synthetase [Clostridium difficile ATCC 43255]
          Length = 645

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 21/144 (14%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIG+    +  D + R  R+   +  V ++    +  +KI ++
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYD--VKFLTGTDEHGEKIQKK 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRATN--HIPQMIYLIQ 137
           A ++  S                  +KD   L            R T   H   +  +  
Sbjct: 61  AIEQGMSEIE----------YLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFT 110

Query: 138 NIILHGHAY--EANNEIIFDTSSI 159
            +   G  Y  E          S 
Sbjct: 111 KLYEQGDIYKGEYEGRYCTPCESF 134


>gi|197284543|ref|YP_002150415.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320]
 gi|226710913|sp|B4ESY6|SYM_PROMH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194682030|emb|CAR41525.1| methionyl-tRNA synthetase [Proteus mirabilis HI4320]
          Length = 675

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FIT    L+
Sbjct: 291 HFIGKDIVYFHSLFWPAVLEGSEYRKPT-NLFVH-GYVTVNGAKMSKSRGTFITARAYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                   + A  +R  
Sbjct: 349 -------HFDADCLRYY 358


>gi|221141486|ref|ZP_03565979.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|262049067|ref|ZP_06021945.1| leucyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|284024805|ref|ZP_06379203.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|259162884|gb|EEW47448.1| leucyl-tRNA synthetase [Staphylococcus aureus D30]
 gi|302751585|gb|ADL65762.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|315197228|gb|EFU27567.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
          Length = 804

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLAIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 635

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 636 NEDGTLSSKIVT 647


>gi|21283430|ref|NP_646518.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|253732411|ref|ZP_04866576.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253734458|ref|ZP_04868623.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|297207527|ref|ZP_06923963.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300911611|ref|ZP_07129055.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|32171568|sp|Q8NW17|SYL_STAAW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|21204871|dbj|BAB95566.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|253723801|gb|EES92530.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253727512|gb|EES96241.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|296887863|gb|EFH26760.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|300887032|gb|EFK82233.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
          Length = 807

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 526 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 585

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 586 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 638

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 639 NEDGTLSSKIVT 650


>gi|269986994|gb|EEZ93270.1| aminoacyl-tRNA synthetase class Ia [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 782

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 63/194 (32%), Gaps = 37/194 (19%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D+I       I +             WI    L+  G KM+KS GN I    ++E   
Sbjct: 497 GIDIIRTWLNYSILRCYQLTGKLPWEKAWIDGMGLDEHGEKMAKSKGNGIDPTIVIE--- 553

Query: 297 FGGRSWPAPVIRLA----------MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
                + A   R             L         F+  RL  +   L+K    +     
Sbjct: 554 ----KYGADAFRFWATSEALPGSNFL---------FSESRLQGSAKFLTKLWNVARLINQ 600

Query: 347 I-DPAVLSALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
             +P  ++    DLN      I    KL  E  K ++ L  F  +  I      +E +  
Sbjct: 601 FGEPKEIA--EKDLNESDKWIINYTEKLTEECIKGYEELNSFIPANRI------REFIWN 652

Query: 404 NISIAIEKLVQERL 417
             +    +LV+ R 
Sbjct: 653 VFAPHYIELVKARA 666


>gi|227903677|ref|ZP_04021482.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
 gi|227868564|gb|EEJ75985.1| valyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
          Length = 879

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS    +     ++ +H    + +GRKMSKS GN I   ++++  
Sbjct: 480 TGYDIIFFWVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPMDVID-- 537

Query: 296 KFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +L  T   +   F+  ++  A   ++K    S 
Sbjct: 538 -----KYGADALRWFLLNGTAPGQDTRFSYTKMDAAWNFINKIWNASR 580


>gi|255580737|ref|XP_002531190.1| valyl-tRNA synthetase, putative [Ricinus communis]
 gi|223529231|gb|EEF31205.1| valyl-tRNA synthetase, putative [Ricinus communis]
          Length = 694

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 37/86 (43%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  +N+++H    + +GRKMSK+ GN I   + +       + +    +R  + + 
Sbjct: 572 FTGTVPFSNVYLHGLIRDSQGRKMSKTLGNVIDPLDTI-------KDFGTDALRFTLALG 624

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              + ++ + +RLT  +   +K    
Sbjct: 625 TAGQDLNLSTERLTANKAFTNKLWNA 650


>gi|212702582|ref|ZP_03310710.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
 gi|212674023|gb|EEB34506.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
          Length = 654

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 48/146 (32%), Gaps = 39/146 (26%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTV 324
           +H  +L +   KMSKS GN +   E+        + +     R  +L   H+     F+ 
Sbjct: 285 VHGYWL-VRDTKMSKSLGNVVEPLEMR-------QKYGLDAFRYFLLREMHFGSDASFSE 336

Query: 325 QRL---------------------TEAEILLSKWPQ---TSTSKGIIDPAVLSALYNDL- 359
           + +                       A+   SK PQ    S     I     +A+ N + 
Sbjct: 337 EGMVTRINADLANDLGNLFSRVLSMTAKYFESKVPQPGEFSEDDKAIVELCATAMTNYIQ 396

Query: 360 ---NT--VSAIQALHKLARESTKNHD 380
              NT     + +L  L R   K  D
Sbjct: 397 LFGNTQFAQGLDSLWDLVRALNKYVD 422



 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 40/129 (31%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   IV D L R  +         ++    +  DKI++ A ++        
Sbjct: 13  VNAKPHLGHAYTTIVADSLSRFHKTLG--DNTMFLTGTDEHGDKIVKAAEKQ------GV 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN--N 150
           +        +  F +    L         R T  +H  ++   +Q +   G  Y      
Sbjct: 65  SPKEFVDGISGLFQQLWPHLGIEN-DAFVRTTDEDHKARVQRFLQQVYDAGDIYFGEFGG 123

Query: 151 EIIFDTSSI 159
              +     
Sbjct: 124 HYCYGCERF 132


>gi|229816447|ref|ZP_04446748.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
 gi|229807989|gb|EEP43790.1| hypothetical protein COLINT_03500 [Collinsella intestinalis DSM
           13280]
          Length = 548

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 15/126 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I+ DV  R  R          V+ +T +D+   + A           
Sbjct: 31  VNADPHLGTAYSTIIADVQARYRRAAGYN-----VKFLTGMDEHGQKVAEAAEKH---GM 82

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANN 150
                       F +    L         R T   P+    +Q     +   G+ Y+ + 
Sbjct: 83  TPQEWCDSQAPHFHELWEELEISNDDF-IRTTE--PRQKRAVQYLWERMQEAGYIYKGSY 139

Query: 151 EIIFDT 156
           +  +  
Sbjct: 140 DGWYCV 145


>gi|49486583|ref|YP_043804.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|56749379|sp|Q6G8G9|SYL_STAAS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49245026|emb|CAG43487.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 806

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 525 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 584

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 585 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 637

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 638 NEDGTLSSKIVT 649


>gi|15675414|ref|NP_269588.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
 gi|81533513|sp|Q99YW3|SYI_STRP1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|13622601|gb|AAK34309.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 67/170 (39%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTV-SAIQ 366
                   +  +++ L +      K   T      +    +PA  +  Y DL TV   + 
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLRFLIANTSDFNPATDTVAYADLGTVDKYMT 682

Query: 367 ALHK----LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
            +         ++ + +D + I+ A  + + +++   +L+    +  IE 
Sbjct: 683 IVFNQLVATITDAYERYDFMAIYKAVVNFVTVDLSAFYLDFAKDVVYIEA 732


>gi|134301014|ref|YP_001114510.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
 gi|189083532|sp|A4J9D2|SYR_DESRM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|134053714|gb|ABO51685.1| arginyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
          Length = 561

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 58/317 (18%), Positives = 105/317 (33%), Gaps = 49/317 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI-- 90
           PT     H+GNAR   + D L  +L +        Y  N  D  ++I    +        
Sbjct: 138 PT--GLLHMGNARGAALGDSLASILDFAGYRVSREYYIN--DAGNQIENFGKSLEVRYLQ 193

Query: 91  PINDAISIITSKNTQQFVKDTTR-------LACLAPTHQPR----ATNHIPQMIYLIQ-N 138
            +   I +       + + DT +          L      R    A   + + +  I+  
Sbjct: 194 QLGQDIQLPEEGYHGEDIIDTVKGYINKNGRGLLDADQTTRRKTLAAYALQEKLTHIRNT 253

Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
           ++  G  Y    ++ +   ++ + G+  +  +DE +    + E+ +        LW ++T
Sbjct: 254 LLDFGVVY----DVWYSEQALHDSGAI-QETLDELRQKGFIYEQEN-------ALWFKAT 301

Query: 199 PMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPH-HENEIAQSC 253
                 +       G P +     A       + FD  I   G D    H H N +  S 
Sbjct: 302 AFGDEKDEVVVRSNGIPTYFAADIAYHKDKYKRGFDRVIDIWGADH---HGHVNRMKGSM 358

Query: 254 CADRIEK--TANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
            A    +     I +    L   G   +MSK  G F+T+ EL+E              R 
Sbjct: 359 EALGHNRDNLQIILMQLVRLLRGGEVVRMSKRTGQFVTLEELVEEVGR-------DAARY 411

Query: 310 AMLMTHYREPIDFTVQR 326
             +M      ++F +  
Sbjct: 412 FFVMRSPDSHLEFDLDL 428


>gi|325578269|ref|ZP_08148404.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
 gi|325160005|gb|EGC72134.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae ATCC 33392]
          Length = 682

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLEGSEYRKPT-NVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLADKLEDEALFAEFTAQAEQIATYYESREYNKAIREIMTLTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|319943230|ref|ZP_08017513.1| isoleucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
 gi|319743772|gb|EFV96176.1| isoleucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
          Length = 953

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +       +  H   ++ +GRKMSKS GN +   E+            A ++RL  
Sbjct: 598 SCMMNDAPPYKALLTHGMVVDGQGRKMSKSLGNGVEPQEVANRLG-------AEILRLWT 650

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y   I  + + L        +   T
Sbjct: 651 ASSDYSGEISVSDEILKRVVEAYRRIRNT 679


>gi|326789740|ref|YP_004307561.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
 gi|326540504|gb|ADZ82363.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
          Length = 658

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/122 (15%), Positives = 43/122 (35%), Gaps = 11/122 (9%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           +  HIG++   +  D + R  R    +  V ++    +   KI  RA ++  +       
Sbjct: 17  NKLHIGHSYTTVAADAMARYKRLRGYD--VMFLTGTDEHGQKIERRAAEDGVTPQAFVDH 74

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIF 154
            +      +   K       ++     R T   H   +  + + +   G  Y++  E ++
Sbjct: 75  IV---DWIKDLWKTMD----ISYDKFIRTTDKEHEETVQKIFKKLYDKGDIYKSEYEGLY 127

Query: 155 DT 156
            T
Sbjct: 128 CT 129


>gi|270158203|ref|ZP_06186860.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|289163540|ref|YP_003453678.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|269990228|gb|EEZ96482.1| methionyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|288856713|emb|CBJ10524.1| methionyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 552

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    +     TA     +GFL ++G+KMSKS G F+     +E
Sbjct: 288 HFVGKDIVYFHALFWPAMLAASGHRTPTAVY--THGFLTVDGQKMSKSRGTFLEARTYIE 345

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 346 -------YLHPEYLRYYF 356


>gi|260889017|ref|ZP_05900280.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
 gi|260861077|gb|EEX75577.1| methionine--tRNA ligase [Leptotrichia hofstadii F0254]
          Length = 633

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 11/113 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G A   I+ DV+ R  R    E  V ++  + +   KI E A +             
Sbjct: 18  PHVGTAYTTIICDVVARYKRLTGEE--VGFMTGVDEHGQKIQEAAEKNGF------TPQQ 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
              K +  F     +L         R T   H+  +  +I+ +   G  Y   
Sbjct: 70  WVDKMSLNFTTLWEKLNISNTDFL-RTTQERHLKTVREIIKRVHDKGDIYRGE 121


>gi|149040965|gb|EDL94922.1| glutamyl-prolyl-tRNA synthetase, isoform CRA_c [Rattus norvegicus]
          Length = 1460

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 27/113 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L ++Y        +    D + +  +               
Sbjct: 208 GYLHIGHAKAAL-------LNQHYQVNFKGKLIMRFDDTNPEKEK--------------- 245

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                   +  ++D   L    P      ++H   ++   + +I  G AY  +
Sbjct: 246 ----EDFEKVILEDVAMLHIK-PDQFTYTSDHFETIMKYAEKLIEEGKAYVDD 293


>gi|57235042|ref|YP_180942.1| leucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123732479|sp|Q3ZA07|SYL_DEHE1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57225490|gb|AAW40547.1| leucyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 813

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 36/181 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       +            E    ++ + G +    +KMSKS G
Sbjct: 528 PVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPFKKLF-NQGIIVSNHQKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +T + L+              +R   M +  + +  ++    L+     L++     T
Sbjct: 587 NVVTPDNLVAEVGT-------DAVRAYLMFVGPWDQGGEWNDSGLSGMSRWLNRVWNLFT 639

Query: 343 SKGIIDPAVLSA----------------LYND---LNTVSAIQALHKLARESTKNHDLLP 383
            +     A   A                +  +    NTV  + AL +L+    K  +   
Sbjct: 640 EEYTPQTASAEAERELKRTLHQTIKKITMDIERLRFNTV--VAALMELSNSLAKFKEAAA 697

Query: 384 I 384
           +
Sbjct: 698 V 698


>gi|57239030|ref|YP_180166.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58578971|ref|YP_197183.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|81819269|sp|Q5HBM8|SYL_EHRRW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|57161109|emb|CAH58018.1| leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|58417597|emb|CAI26801.1| Leucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 830

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 52/126 (41%), Gaps = 19/126 (15%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N + ++++++        + A   RL +L  T     I++  + +      L
Sbjct: 591 EKMSKSKKNVVHLDDIID-------KYGADSARLFILSDTPPERDIEWLDENIEGVSRYL 643

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNHD------LLPIFN 386
           +K  +       ++   +    +++  +T+     +HK+  + T + +       +  F 
Sbjct: 644 NKLWKMIVDYDQLEQNFV---CDNISSDTLEYRINVHKILNDITNDLEFYRFNCAVAKFR 700

Query: 387 ASAHIL 392
             ++++
Sbjct: 701 ELSNVI 706


>gi|325124515|gb|ADY84038.1| leucyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 874

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 51/157 (32%), Gaps = 43/157 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSA 364
            L +       + +       ID A LS    D                      NT  A
Sbjct: 686 FLKRVWRLVASFLEKGNQASTIDTANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--A 743

Query: 365 IQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
           I AL +L   S K     ++D+     A   +L +  
Sbjct: 744 IAALMELLNASNKFEAKDDNDVAVEREAITTLLTLLA 780


>gi|305663610|ref|YP_003859898.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
 gi|304378179|gb|ADM28018.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
          Length = 979

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 24/136 (17%)

Query: 28  MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE------------KCVTYVRNITDI 75
           MY  GP      HIG+ R  ++ D++ R  R                   +     I++ 
Sbjct: 45  MYPNGP-----IHIGHGRTYLIADIIARFKRLQGYNVLFPMGFHYTGTPIIAMAEAISEG 99

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFV---KDTTRLACLAPTHQPRATNHIPQM 132
           D  +IE  R  +                 + F    KD  +L  L+   +   T   P+ 
Sbjct: 100 DKDLIELFRDTYGVPSDEIDRMKDPLYLARYFHRVSKDVMKLYGLSIDWRREFTTIDPEF 159

Query: 133 IYLI----QNIILHGH 144
              I    + +   G+
Sbjct: 160 KSFIHWQFRKLYEKGY 175



 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 7/82 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G DLI  H    I                I NG++ ++ +KMSKS  N I + 
Sbjct: 600 PLDLRVSGKDLIPNHLTFFIFNHVAIYPKAFYPRGIIANGWVLIKQQKMSKSARNIIPLK 659

Query: 290 ELLETKKFGGRSWPAPVIRLAM 311
            L+E        + + ++RL +
Sbjct: 660 NLIE-------EYGSDIVRLLL 674


>gi|300870124|ref|YP_003784995.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
 gi|300687823|gb|ADK30494.1| leucyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
          Length = 853

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 18/153 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+     + D + R  +    +  + +     D      E A  EH + P    +  I
Sbjct: 47  HMGHVSNYTIADSIARYYKLLGYD--ILHPMGW-DAFGMPAENAAIEHKTHPAEWTLKNI 103

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY----LIQNIILHGHAYEANNEI-IF 154
            +      +KD   L   +       T  +P         I  +   G  Y    ++   
Sbjct: 104 AN------MKDQLNLLGYSYDWDREVTTCLPDYYKWGQWFILKMYEKGLLYRKGGDVNWC 157

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           D  +       +  ++  +    R   +  KK 
Sbjct: 158 DHCNT----VLANEQVTAEGTCWRCDGEVTKKK 186


>gi|300703367|ref|YP_003744969.1| methionyl-tRNA synthetase [Ralstonia solanacearum CFBP2957]
 gi|299071030|emb|CBJ42339.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
           [Ralstonia solanacearum CFBP2957]
          Length = 688

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 293 HFIGKDILYFHTLFWPAMLQ-FSGYRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 350

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           T            +R           ++ T++ L 
Sbjct: 351 T------GLNPEWLRYYFAAK-----LNATMEDLD 374



 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 16/114 (14%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+    I  D+  R  R    E  + YV         ++ RA +E  
Sbjct: 14  YANGP-----IHIGHMVEYIQTDIWVRFQRMRGHE--IYYVGADDTHGTPVMLRAEKE-- 64

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
                     +  +   +  +D          +   +T+   +   L + + L 
Sbjct: 65  ----GITPRQLIERVWTEHKRDFDNFLVSFDNYY--STDS-DENRELCERVYLK 111


>gi|254977164|ref|ZP_05273636.1| methionyl-tRNA synthetase [Clostridium difficile QCD-66c26]
 gi|255094494|ref|ZP_05323972.1| methionyl-tRNA synthetase [Clostridium difficile CIP 107932]
 gi|255316245|ref|ZP_05357828.1| methionyl-tRNA synthetase [Clostridium difficile QCD-76w55]
 gi|255518906|ref|ZP_05386582.1| methionyl-tRNA synthetase [Clostridium difficile QCD-97b34]
 gi|255652085|ref|ZP_05398987.1| methionyl-tRNA synthetase [Clostridium difficile QCD-37x79]
 gi|260685058|ref|YP_003216343.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260688716|ref|YP_003219850.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
 gi|260211221|emb|CBA66728.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
 gi|260214733|emb|CBE07412.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
          Length = 645

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 21/144 (14%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIG+    +  D + R  R+   +  V ++    +  +KI ++
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYD--VKFLTGTDEHGEKIQKK 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRATN--HIPQMIYLIQ 137
           A ++  S                  +KD   L            R T   H   +  +  
Sbjct: 61  AIEQGMSEIE----------YLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFT 110

Query: 138 NIILHGHAY--EANNEIIFDTSSI 159
            +   G  Y  E          S 
Sbjct: 111 KLYEQGDIYKGEYEGRYCTPCESF 134


>gi|195587864|ref|XP_002083681.1| GD13863 [Drosophila simulans]
 gi|194195690|gb|EDX09266.1| GD13863 [Drosophila simulans]
          Length = 869

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 51/176 (28%), Gaps = 21/176 (11%)

Query: 18  FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F   D S  + YV     Y     H+G+ R   + D + R  R     K V         
Sbjct: 55  FNPKD-SKDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCG--KNVFQPMGWDSF 111

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
                  A Q           +  T +N  Q  +   RL C    +   +T   P+    
Sbjct: 112 GLPAENAANQRGVE------PASWTEQNIAQMKEQLKRLGCSFDWNHELSTCS-PKYYKW 164

Query: 136 IQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            Q     +  HG AY+    +              +  ++D      R   K  KK
Sbjct: 165 TQHLFLMLHRHGLAYQNEALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|150401533|ref|YP_001325299.1| glutamyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
 gi|187643674|sp|A6UW15|SYE_META3 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|150014236|gb|ABR56687.1| glutamyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
          Length = 561

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 27/117 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+AR  ++ D       Y+  +     +  + D D           P   +
Sbjct: 106 PNPSGPLHLGHARAAVLND-------YFAKKYNGKLILRLEDTD-----------PKRVM 147

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
            +A  +I         +D   L         + ++ +P        +I  GHAY  +
Sbjct: 148 PEAYEMI--------KEDLEWLGVKIDDVIVQ-SDRLPIYYEYGTKLIEMGHAYVCD 195


>gi|114331896|ref|YP_748118.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
 gi|122313375|sp|Q0AES9|SYM_NITEC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114308910|gb|ABI60153.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
          Length = 701

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 39/95 (41%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     T  I+ H GFL + G KMSKS G FIT      
Sbjct: 295 HFIGKDILYFHALFWPAMLENAGYRTPT-QIFAH-GFLTVNGEKMSKSRGTFIT------ 346

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
            + +  +      +R       Y   ++ +++ + 
Sbjct: 347 AESYLQQRLNPEWLRYY-----YAAKLNGSMEDID 376


>gi|38567295|emb|CAE76584.1| related to isoleucine--tRNA ligase [Neurospora crassa]
          Length = 957

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 21/123 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW------------ 302
           A  +     +  H   L+  G+KMSKS GN I+ +++++                     
Sbjct: 586 AVGLSPFKTLITHGFTLDKAGKKMSKSLGNIISADQVMDGSLLPPLKVRNKDRDPNAPPP 645

Query: 303 ----PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----TSTSKGIIDPAVLS 353
                   +RL +  + Y   I      L      L+K+       T + +     A L+
Sbjct: 646 KDALGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYRTIIKMLTGSMEQSARAAPLT 705

Query: 354 ALY 356
           AL 
Sbjct: 706 ALD 708


>gi|325266408|ref|ZP_08133085.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981851|gb|EGC17486.1| methionine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 684

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             I+ H GFL ++G+KMSKS G FIT    LE
Sbjct: 294 HFIGKDILYFHALFWTAMLE-YSGHRAPTGIFAH-GFLTVDGQKMSKSRGTFITAKSYLE 351

Query: 294 TKKFGGRSWPAPVIRLAM 311
                 +      +R  +
Sbjct: 352 ------QGLNPEWMRYYI 363


>gi|325963359|ref|YP_004241265.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469446|gb|ADX73131.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 842

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 44/146 (30%), Gaps = 22/146 (15%)

Query: 17  EFQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
            F  +D     R YV     Y     H+G+A    + DV+ R LR               
Sbjct: 43  VFTPVDDGSRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGY----------- 91

Query: 74  DIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+   I   +     E+ +I  N   S  T  N         R A  +     R     P
Sbjct: 92  DVLHPIGWDSFGLPAENAAIKRNAHPSEWTYANIDTQAASFKRYAI-SADWSRRLHTSDP 150

Query: 131 QMIYLIQ----NIILHGHAYEANNEI 152
           +     Q         G AY  N+ +
Sbjct: 151 EYYRWTQWLFKRFYERGLAYRKNSPV 176


>gi|322380143|ref|ZP_08054391.1| arginyl-tRNA synthetase [Helicobacter suis HS5]
 gi|321147448|gb|EFX42100.1| arginyl-tRNA synthetase [Helicobacter suis HS5]
          Length = 340

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 28/98 (28%), Gaps = 10/98 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  I  D    L R+        Y  N      K++  +         
Sbjct: 119 PT--GPLHIGHARGAIFGDSFGNLARFLGYRVHTEYYVNDLGAQIKLLGLSLWLAICEMQ 176

Query: 93  NDAISIITSKNTQQFVKDTTR--------LACLAPTHQ 122
           +  +   T      ++ +  +        L    P   
Sbjct: 177 HLKVEYPTEYYRGAYINELAQKALEHFPDLNNNDPNLY 214


>gi|320526965|ref|ZP_08028154.1| isoleucine--tRNA ligase [Solobacterium moorei F0204]
 gi|320132550|gb|EFW25091.1| isoleucine--tRNA ligase [Solobacterium moorei F0204]
          Length = 910

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++ +G KMSKS GN +   +++           A V RL  
Sbjct: 567 STAVNGTAPYKEVLSHGYVVDSKGEKMSKSVGNVVNPMDIINQNG-------ADVFRLWA 619

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + + ++E +      + +      K   T
Sbjct: 620 MSSDFKEDLKLGPSNIKQVSDQYRKIRNT 648


>gi|291277218|ref|YP_003516990.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
 gi|290964412|emb|CBG40262.1| leucyl-tRNA synthetase [Helicobacter mustelae 12198]
          Length = 806

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 29/104 (27%), Gaps = 17/104 (16%)

Query: 18  FQAID----PSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           F+ +D    P    + M+   P      H+G+ R   + D + R  R       V +   
Sbjct: 22  FEPLDDTTLPKKYILSMF---PYPSGALHMGHVRNYCIGDAMARHYRKQGFN--VLHPIG 76

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                      A +              T  N +   K+   L 
Sbjct: 77  FDAFGMPAENAAIKHGAH------PKEWTYSNIEAMHKEFKSLG 114



 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MT 314
              E  +N+ +  G +  EGRKMSKS GN I  + ++       + + +   RL +L   
Sbjct: 552 HFDEPFSNL-LTQGMVLKEGRKMSKSLGNVIEPHAII-------QKYGSDTARLFVLFAA 603

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTS 341
              + +++    +  A   + K+ + S
Sbjct: 604 PPAKELEWIDGGVEGAYRFIRKFYEKS 630


>gi|282904333|ref|ZP_06312221.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906158|ref|ZP_06314013.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282909075|ref|ZP_06316893.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282911383|ref|ZP_06319185.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282919520|ref|ZP_06327255.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|283958511|ref|ZP_06375962.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295428334|ref|ZP_06820963.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590702|ref|ZP_06949340.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|282317330|gb|EFB47704.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282325078|gb|EFB55388.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282327339|gb|EFB57634.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331450|gb|EFB60964.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595951|gb|EFC00915.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790660|gb|EFC29477.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|295127734|gb|EFG57371.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297575588|gb|EFH94304.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|312437784|gb|ADQ76855.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|153864441|ref|ZP_01997343.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS]
 gi|152146065|gb|EDN72658.1| Methionyl-tRNA synthetase, class Ia [Beggiatoa sp. SS]
          Length = 407

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A          TA +++H GFL ++G KMSKS G FI     L 
Sbjct: 52  HFIGKDIQYFHCLFWPAMLTAGGFRNPTA-VFVH-GFLKVDGEKMSKSRGTFINARTYLN 109

Query: 294 TKKFGGRSWPAPVIRLAM 311
             K          +R   
Sbjct: 110 YLK-------PEYLRYYF 120


>gi|58617532|ref|YP_196731.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
 gi|58417144|emb|CAI28257.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 506

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 47/140 (33%), Gaps = 13/140 (9%)

Query: 27  RMYVCGPT--VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +YV  P   V D  HIG+    ++ D++ R  R          V+ IT  D+      +
Sbjct: 3   NIYVTTPIYYVNDVPHIGHVYTTLISDIIARFKRLDGYN-----VKFITGTDEH---GQK 54

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILH 142
            E  +   N ++   T   +  F   T  +         R T   H   +  L + +  +
Sbjct: 55  IEKAAAKANKSLVEFTDHASAIFQHLTGVMNFSHDDF-IRTTEIRHKKAVTELWRRLYHY 113

Query: 143 GHAYEANNEIIFDTSSIPNY 162
           G  Y  N    +       Y
Sbjct: 114 GKIYLGNYSGWYAVRDETFY 133


>gi|319651920|ref|ZP_08006043.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
 gi|317396412|gb|EFV77127.1| leucyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDVGIVHTKEPFQKLFNQGMILGENNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N +  +E++ +         A  +RL  M M      I ++   L  +   L + W    
Sbjct: 583 NVVNPDEIVASHG-------ADTLRLYEMFMGPLEASIAWSTNGLDGSRRFLDRIWRLFV 635

Query: 342 TSKGIIDPAVLS 353
              G +   +  
Sbjct: 636 EETGELSQGIQD 647


>gi|301066333|ref|YP_003788356.1| isoleucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|300438740|gb|ADK18506.1| Isoleucyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 948

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 19/180 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  +     I      L+ +GRKMSKS GN I    +        + + A +IRL +
Sbjct: 588 SVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATI-------EKQFGAEIIRLWV 640

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---- 363
                   +  +V    +      K   T      + G  DP   +  Y++L +V     
Sbjct: 641 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMM 700

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
             +  + K  + +   +D   +    +  L  ++   +L+    +     ++ +    + 
Sbjct: 701 VRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVY---IEAKDDAKRR 757


>gi|284048956|ref|YP_003399295.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
 gi|283953177|gb|ADB47980.1| arginyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
          Length = 552

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 36/162 (22%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF--------TVQR-- 326
           KMSK  G  +T+NEL+E              R   +M      +DF        +     
Sbjct: 379 KMSKRTGKSVTLNELIEEVGT-------DAARFFFIMRSMDSQLDFDLTLATEHSNDNPV 431

Query: 327 ----------------LTEAEILLSKWPQTSTSKGIIDPAVLSALYND---LNTVSAIQA 367
                           + E +I L K    S  K  I+  ++  L +    + T +A +A
Sbjct: 432 YYVQYAHARICSILRQMEEEKIALRKDCDLSVLKEPIEVDLIKKLNDYEELIETAAAERA 491

Query: 368 LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
            HK+A        L   F     +LG++   +     +  A+
Sbjct: 492 PHKIAHYVYDLAGLFHSFYNQCRVLGVDPAVQQARLALITAV 533


>gi|282882605|ref|ZP_06291224.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
 gi|281297580|gb|EFA90057.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 22/157 (14%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ +++  L+ EG+KMSKS GN +   EL +        + A V+R
Sbjct: 563 LAISTYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVAPFELFD-------KYGADVVR 615

Query: 309 LAML--MTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDL 359
             +L     +  P  F    L E E    +       +     +   IDP      Y D 
Sbjct: 616 WYLLYVSPPW-NPTKFDEDGLREMESKFFRSLRNIYNFFSLYANTDDIDPRTFQVKYEDR 674

Query: 360 NTVSAI-----QALHKLARESTKNHDLLPIFNASAHI 391
           + +          L K+ R+     +L  +    +  
Sbjct: 675 DEIDKWLLSKYNRLVKVVRDDMDKFELTKVVREISDF 711


>gi|224419178|ref|ZP_03657184.1| isoleucyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
          Length = 650

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC  +       I  H   ++ +G KMSKS GN +   E+L       + + + ++RL +
Sbjct: 589 SCAVNEKAPYKAIVTHGFTMDEKGEKMSKSKGNVVVPKEVL-------KEFGSEILRLWV 641

Query: 312 LMTHY 316
            M+ Y
Sbjct: 642 AMSDY 646


>gi|218680173|ref|ZP_03528070.1| isoleucyl-tRNA synthetase [Rhizobium etli CIAT 894]
          Length = 408

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 50/161 (31%), Gaps = 20/161 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN     E+++          A ++RL +
Sbjct: 221 SAATRGRAPYNAVLTHGFTMDEKGEKMSKSKGNVTAPQEVMKDAG-------ADILRLWV 273

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALYNDLNTVSA---- 364
           + + Y + +      +        K   T          D     A  +           
Sbjct: 274 MTSDYADDLRVGKTIIQTNVDAYRKLRNTIRWMLGTLAHDKGEEIAFAD---LPELEQLM 330

Query: 365 ---IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
              +  L +L RE+    D   I  A      +E+   + +
Sbjct: 331 LHRLAELDELVRENYDAFDFKKIARALIDFANVELSAFYFD 371


>gi|150866954|ref|XP_001386726.2| isoleucine-tRNA ligase [Scheffersomyces stipitis CBS 6054]
 gi|149388210|gb|ABN68697.2| isoleucine-tRNA ligase [Scheffersomyces stipitis CBS 6054]
          Length = 983

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 44/116 (37%), Gaps = 4/116 (3%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-TKKFGGRSWPAPVIRLAMLMTHYRE 318
               I  H   L+ +  KMSKS GN I+    +E   K    +     +RL +  ++Y  
Sbjct: 627 PFTKIITHGFTLDSKNEKMSKSKGNIISPRHAIEGGGKPLLPALGTDGLRLWVASSNYNA 686

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-NDLNTVS--AIQALHKL 371
            +    + L+     + K   T              +  N+LN +   A+  L+KL
Sbjct: 687 DVSVGSEVLSRVFENMKKLRVTFKYLLGNLNDFREPVDYNNLNPLDKYALSKLYKL 742


>gi|221067569|ref|ZP_03543674.1| Prophage tail length tape measure [Comamonas testosteroni KF-1]
 gi|220712592|gb|EED67960.1| Prophage tail length tape measure [Comamonas testosteroni KF-1]
          Length = 1048

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 2/136 (1%)

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
           QR  E +  L+   ++    G     +  A+ + + T      L +  +E     +    
Sbjct: 329 QRANEVQQSLNALGRSFQWVGDKASGMWQAIKDSVRTAPLAAQLAEAQKEYRFLAEKSTQ 388

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
               A   GIE      +  +  A++K+   +  +    + ++A   R Q  + G    D
Sbjct: 389 GAKIASFFGIEGYDSTRDDRL-KALKKVTDLQQQIRAEDERAAAQQKRAQDVAAGIAATD 447

Query: 445 YKNPDNGQRMTRWKQK 460
             +    + +  WK++
Sbjct: 448 SWD-RRAKSLRNWKEQ 462


>gi|268566819|ref|XP_002639821.1| C. briggsae CBR-ERS-2 protein [Caenorhabditis briggsae]
 gi|187022673|emb|CAP38175.1| CBR-EARS-1 protein [Caenorhabditis briggsae AF16]
          Length = 1129

 Score = 39.5 bits (91), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 53/164 (32%), Gaps = 42/164 (25%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L +YY  E     +    D +    E A  EH         
Sbjct: 206 GYLHIGHAKAAL-------LNQYYQQEFEGQLIMRFDDTN-PAKENAHFEHVI------- 250

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
                       +D   L  + P     +++H   ++ + + ++  G A+  + +     
Sbjct: 251 -----------KEDLAMLNII-PDRWTHSSDHFEMLLTMCEKLLKEGKAFVDDTD----- 293

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
                  + + R   EQ+  +R       KN     LW+     
Sbjct: 294 -------TETMRNEREQRQDSRNRGNTPDKNLQ---LWEEMKKG 327


>gi|326436029|gb|EGD81599.1| leucyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
          Length = 845

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 45/166 (27%), Gaps = 18/166 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R     K V +              A      I  
Sbjct: 75  PYPSGALHMGHVRVYTISDSVARFHRLTG--KEVIHPMGWDAFGLPAENAA------IER 126

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
           N   +  T +N     +    LAC +   +   T   P      Q     +   G  Y+ 
Sbjct: 127 NIDPADWTIRNIAYMKEQLDALAC-SFDWEREVTTCSPSYYKWTQWLFLQLHKRGLVYQD 185

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
              +              +  ++D +    R      K+    + L
Sbjct: 186 KALVNWDPVDQT----VLANEQVDAEGRSWRSGALVEKRRLRQWFL 227


>gi|325688227|gb|EGD30246.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 930

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D       + +  S     +     I      L+ +G KMSKS GN I  +++
Sbjct: 550 DIYLEGSDQYRGWFNSSLITSVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV 609

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                   + + A ++RL +        +  ++  L++      K   T           
Sbjct: 610 -------EKQFGAEILRLWVTSVDSSNDVRISMDILSQVSETYRKIRNTLR--------F 654

Query: 352 LSALYNDLN 360
           L A  +D N
Sbjct: 655 LIANTSDFN 663


>gi|309811151|ref|ZP_07704947.1| valine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434881|gb|EFP58717.1| valine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 904

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 16/71 (22%)

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHEN               N  I    L+ + +KMSKS GN  T  +++       R + 
Sbjct: 587 HHEN---------GTVPWKNTAISGWILDPDRKKMSKSKGNAQTPEDVV-------REFG 630

Query: 304 APVIRLAMLMT 314
           A  +R      
Sbjct: 631 ADAVRYWAASG 641


>gi|300813634|ref|ZP_07093962.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
 gi|300512270|gb|EFK39442.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
           F0141]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 56/157 (35%), Gaps = 22/157 (14%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ +++  L+ EG+KMSKS GN +   EL +        + A V+R
Sbjct: 563 LAISTYMTGKSPYKNVLVNDLILDKEGKKMSKSRGNTVAPFELFD-------KYGADVVR 615

Query: 309 LAML--MTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDL 359
             +L     +  P  F    L E E    +       +     +   IDP      Y D 
Sbjct: 616 WYLLYVSPPW-NPTKFDEDGLREMESKFFRSLRNIYNFFSLYANTDDIDPRTFQVKYEDR 674

Query: 360 NTVSAI-----QALHKLARESTKNHDLLPIFNASAHI 391
           + +          L K+ R+     +L  +    +  
Sbjct: 675 DEIDKWLLSKYNRLVKVVRDDMDKFELTKVVREISDF 711


>gi|313126424|ref|YP_004036694.1| isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312292789|gb|ADQ67249.1| Isoleucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 1044

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/190 (17%), Positives = 65/190 (34%), Gaps = 31/190 (16%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H    +  GRKMSKS GN +T  E ++             +R  +L 
Sbjct: 574 AARGEIPYEEVLMHGFANDENGRKMSKSLGNIVTPEEAIDRAGRDP-------LRAYLLS 626

Query: 314 T-HYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
                  + F    L + +  L+      ++P         DPA       DL +   + 
Sbjct: 627 HDQQGVDLSFDWDGLADTQSALNIFWNVFRFPLPYMELDGYDPA-----NPDL-SAGELS 680

Query: 367 ALHKLA--------RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI-EKLVQERL 417
            + +           +     D   + +A   IL  +   E +++    AI E++ +E  
Sbjct: 681 VVDEWVLSRLQTVKADVADAWDDYEVHDALNAIL--DFVTEDVSRFYVKAIRERMWEEED 738

Query: 418 ILLKMKKFSS 427
              K   +++
Sbjct: 739 SESKRGAYAT 748


>gi|255657488|ref|ZP_05402897.1| methionyl-tRNA synthetase [Clostridium difficile QCD-23m63]
 gi|296449084|ref|ZP_06890874.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296879907|ref|ZP_06903880.1| methionine--tRNA ligase [Clostridium difficile NAP07]
 gi|296262177|gb|EFH08982.1| methionine--tRNA ligase [Clostridium difficile NAP08]
 gi|296429196|gb|EFH15070.1| methionine--tRNA ligase [Clostridium difficile NAP07]
          Length = 645

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 21/144 (14%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               YV  P  Y     HIG+    +  D + R  R+   +  V ++    +  +KI ++
Sbjct: 3   KPSFYVTTPIYYPSGGLHIGHTYSTVAADTIARFKRFCGYD--VKFLTGTDEHGEKIQKK 60

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRATN--HIPQMIYLIQ 137
           A ++  S                  +KD   L            R T   H   +  +  
Sbjct: 61  AIEQGMSEIE----------YLDGMIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFT 110

Query: 138 NIILHGHAY--EANNEIIFDTSSI 159
            +   G  Y  E          S 
Sbjct: 111 KLYEQGDIYKGEYEGRYCTPCESF 134


>gi|91773687|ref|YP_566379.1| arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
 gi|121691659|sp|Q12V97|SYR_METBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91712702|gb|ABE52629.1| Arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
          Length = 567

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 34/111 (30%), Gaps = 13/111 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+ R  I+ D L R+L+    +  + Y  N       I+  A         + 
Sbjct: 123 PNGPLHVGHIRNSIIGDTLGRILKRAGYDVELHYYVNDMGRQIAIVSWALGYFEFDESSK 182

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
               I     +        L              + ++  L+Q ++  G A
Sbjct: 183 PDHAIADVYIKA----NAELNAHP--------EKVAEIDKLMQ-LVEKGDA 220


>gi|49484005|ref|YP_041229.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|56749408|sp|Q6GFU3|SYL_STAAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49242134|emb|CAG40834.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|315195672|gb|EFU26059.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 804

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 583 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 635

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 636 NEDGTLSSKIVT 647


>gi|329119905|ref|ZP_08248579.1| leucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
 gi|327464061|gb|EGF10372.1| leucine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
          Length = 876

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 40/148 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   +L++       ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQQLID-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDP--------------------AVLSALYND------LNTVSAI 365
            +  +T      +G +                      A ++ + +D       NT  A+
Sbjct: 686 RRLWRTVYEHAKQGAVKAFAGDQSGLGKELKDLRHKLHATIAKVSDDYGRRQQFNT--AV 743

Query: 366 QALHKLARESTKNHDLLPIFNASA-HIL 392
            A+ +L  +  K         A A  +L
Sbjct: 744 AAVMELLNQYDKTDTASEAGRAVAQEVL 771


>gi|283471024|emb|CAQ50235.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|257425871|ref|ZP_05602295.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257431172|ref|ZP_05607549.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433853|ref|ZP_05610211.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436770|ref|ZP_05612814.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282914552|ref|ZP_06322338.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282924898|ref|ZP_06332564.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|293503630|ref|ZP_06667477.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510646|ref|ZP_06669351.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537187|ref|ZP_06671867.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|257271565|gb|EEV03711.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257278120|gb|EEV08768.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281946|gb|EEV12083.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284121|gb|EEV14244.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313264|gb|EFB43660.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282321733|gb|EFB52058.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|290920032|gb|EFD97100.1| leucine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095296|gb|EFE25561.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466537|gb|EFF09058.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|254556997|ref|YP_003063414.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|254045924|gb|ACT62717.1| isoleucyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 932

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 16/188 (8%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             YL    D++  G D       + +  S           +      L+ +GRKMSKS G
Sbjct: 544 RSYLDYPADLYLEGSDQYRGWFNSSLITSVAVSGHAPYKQVLSQGFTLDNQGRKMSKSLG 603

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST- 342
           N I   +++       +   A ++R+ +        +  +++   +      K+  T   
Sbjct: 604 NTIAPADVI-------KQMGAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRF 656

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQA--LHKLAREST---KNHDLLPIFNASAHILGI 394
              +    DP      Y DL +V       L++   E+     ++D L I+    + L +
Sbjct: 657 MLGNTADFDPKTNRVAYEDLASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTV 716

Query: 395 EVCKEHLN 402
           ++   +L+
Sbjct: 717 DLSNFYLD 724


>gi|229588314|ref|YP_002870433.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
 gi|259511512|sp|C3KDX4|SYI_PSEFS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|229360180|emb|CAY47037.1| isoleucyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
          Length = 943

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS  N I   ++ +T         A ++RL + 
Sbjct: 584 CAIDNHAPYRELLTHGFTVDETGRKMSKSLKNVIEPKKINDTLG-------ADIMRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEIAVSDQILARSADAYRRIRNTAR 666


>gi|300768835|ref|ZP_07078729.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493568|gb|EFK28742.1| isoleucine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 932

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 69/188 (36%), Gaps = 16/188 (8%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             YL    D++  G D       + +  S           +      L+ +GRKMSKS G
Sbjct: 544 RSYLDYPADLYLEGSDQYRGWFNSSLITSVAVSGHAPYKQVLSQGFTLDNQGRKMSKSLG 603

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST- 342
           N I   +++       +   A ++R+ +        +  +++   +      K+  T   
Sbjct: 604 NTIAPADVI-------KQMGAEIVRMWVASVDTSSDVRVSMESFKQVADSYKKFRNTVRF 656

Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQA--LHKLAREST---KNHDLLPIFNASAHILGI 394
              +    DP      Y DL +V       L++   E+     ++D L I+    + L +
Sbjct: 657 MLGNTADFDPKTNRVAYEDLASVDQYMETRLNEFVAETKDHYDHYDFLDIYKKLINFLTV 716

Query: 395 EVCKEHLN 402
           ++   +L+
Sbjct: 717 DLSNFYLD 724


>gi|239631632|ref|ZP_04674663.1| isoleucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526097|gb|EEQ65098.1| isoleucyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 928

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 63/180 (35%), Gaps = 19/180 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  +     I      L+ +GRKMSKS GN I    +        + + A +IRL +
Sbjct: 568 SVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATI-------EKQFGAEIIRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---- 363
                   +  +V    +      K   T      + G  DP   +  Y++L +V     
Sbjct: 621 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMM 680

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
             +  + K  + +   +D   +    +  L  ++   +L+    +     ++ +    + 
Sbjct: 681 VRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVY---IEAKDDAKRR 737


>gi|221229512|ref|YP_002502928.1| methionyl-tRNA synthetase [Mycobacterium leprae Br4923]
 gi|219932619|emb|CAR70331.1| putative methionyl-tRNA synthase [Mycobacterium leprae Br4923]
          Length = 537

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     VR +T  D+  ++ A+    +       + 
Sbjct: 17  PHIGHAYEYIATDAIARFKRLDGLD-----VRFLTGTDEHGLKVAQ---AAEAAGVPTAQ 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L   +     R T  +H      + + +   G  Y       +  
Sbjct: 69  LARRNSGVFQRMQEALHI-SFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTYSGWYSV 127

Query: 157 S 157
            
Sbjct: 128 R 128


>gi|229587045|ref|YP_002845546.1| valyl-tRNA synthetase [Rickettsia africae ESF-5]
 gi|259516949|sp|C3PLG3|SYV_RICAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|228022095|gb|ACP53803.1| Valyl-tRNA synthetase [Rickettsia africae ESF-5]
          Length = 812

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 41/112 (36%), Gaps = 14/112 (12%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           +DL    HE         I ++          NI ++   L  +  KMSKS GN +   +
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNIMVNGWCLAEDRSKMSKSKGNVLVPEK 549

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 550 LLE-------QYGSDVIRYWSANSKLGADTTYSEDVMKNGKRLVNKLWNAAK 594


>gi|149378169|ref|ZP_01895886.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893]
 gi|149357531|gb|EDM46036.1| Methionyl-tRNA synthetase [Marinobacter algicola DG893]
          Length = 677

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 8/55 (14%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                + +W H GF+ + G+KMSKS G FI     L+             +R   
Sbjct: 316 GFRTPSAVWAH-GFVTVNGKKMSKSRGTFIMARTYLD-------HLDPEYLRYYF 362



 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 14/117 (11%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      H+G+    I  D+  R  +     +   YV         I+ RA +E  
Sbjct: 20  YANGP-----IHLGHLLEYIQTDIWVRYQKMRG--QNCYYVCADDAHGTAIMLRAERE-- 70

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI-ILHGH 144
                 +   +  +   +  +D          +    +    Q    I      +GH
Sbjct: 71  ----GISSESLIDRIRDEHQQDFGGFHIRFDNYYTTHSEENRQFSEYIYRQLQENGH 123


>gi|159042613|ref|YP_001531407.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
 gi|189082998|sp|A8LJY0|SYL_DINSH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157910373|gb|ABV91806.1| leucyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
          Length = 869

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 38/139 (27%), Gaps = 13/139 (9%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + YV    P      H+G+ R   + DV+ R          V +           
Sbjct: 38  DPAKQKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARYKASCGF--SVLHPMGWDAFGMPA 95

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
              A                T  N  +       L       +  AT    +  Q   + 
Sbjct: 96  ENAAMATGGH------PKDWTYANIAEMRAQMKPLGLSIDWSREFATCDEAYYGQQQSMF 149

Query: 137 QNIILHGHAYEANNEIIFD 155
            + +  G  Y  N  + +D
Sbjct: 150 LDFLEKGLVYRKNAVVNWD 168


>gi|78484824|ref|YP_390749.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123555907|sp|Q31IE8|SYL_THICR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78363110|gb|ABB41075.1| leucyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 877

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 20/149 (13%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N I    L++        + A  +RL ++  +   + ++++   +  A   L+
Sbjct: 634 KMSKSKNNGIDPQTLID-------QYGADTLRLYIMFASPPEQTLEWSDSAVEGAHRFLN 686

Query: 336 K-WPQTSTSKGIIDPAVLSALYNDL-NTVSAI---------QALHKLARESTKNHDLLPI 384
           + W Q  T       A  ++  +DL     A+         +    + R    N  +   
Sbjct: 687 RVWRQVQTHVSTGVVAACTS-NDDLTKEQKALRLKLHTTLQKVTDDMGRRMHFNTAIAAT 745

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLV 413
                 I   +   +     +  A+E LV
Sbjct: 746 MELLNDISRFKDESDAGRSVMQEALEMLV 774


>gi|56460055|ref|YP_155336.1| leucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
 gi|60390666|sp|Q5QYD1|SYL_IDILO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56179065|gb|AAV81787.1| Leucyl-tRNA synthetase [Idiomarina loihiensis L2TR]
          Length = 858

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 47/135 (34%), Gaps = 36/135 (26%)

Query: 271 LNLEGR-KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLT 328
           +N+ G  KMSKS  N I    ++E        + A  +RL M+        ++++   + 
Sbjct: 612 VNIGGMSKMSKSKNNGIDPQTMVER-------YGADTVRLFMMFAAPPEMTLEWSDSGVE 664

Query: 329 EAEILLSKWPQTSTSKGIIDPAV-------------------LSALYND------LNTVS 363
            A+  L +  + +        A                    ++ + +D       NT  
Sbjct: 665 GAQRFLRRLWKLTYELNNAGGACSGQSLNANQKQLRRELHKTIAKVSDDMGRRQHFNT-- 722

Query: 364 AIQALHKLARESTKN 378
           AI A+ +L     K 
Sbjct: 723 AIAAIMELLNHLQKA 737


>gi|157827969|ref|YP_001494211.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165932660|ref|YP_001649449.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166232835|sp|A8GQM8|SYR_RICRS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|189083544|sp|B0BW17|SYR_RICRO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|157800450|gb|ABV75703.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165907747|gb|ABY72043.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 576

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVN 164


>gi|313623634|gb|EFR93795.1| valyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 874

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 477 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 534

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 535 -----KYGADSLRYTLATGS--SPGQDLKFSFEKVESTWNFINKIWNASR 577


>gi|303243692|ref|ZP_07330033.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
 gi|302485934|gb|EFL48857.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
          Length = 228

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG++R  IV D L R+L +        Y  N
Sbjct: 129 PNGPLHIGHSRNAIVGDSLKRVLEFAGYNVETQYYVN 165


>gi|254670920|emb|CBA07514.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha153]
          Length = 912

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 669 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 721

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 722 RRLWRTVYEYLKQGEAVNAFAGSQDGLSKELKDLRHKLHATIAKVSDDYGRRQQFNT--A 779

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 780 IAAVMELLNQYDKTDTSGEQGRAVAQEVL 808


>gi|110331789|gb|ABG67000.1| methionine-tRNA synthetase 2 precursor [Bos taurus]
          Length = 589

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 322 GAGMSPPHRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 371


>gi|198282147|ref|NP_001092441.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
 gi|182689574|sp|A6H7E1|SYMM_BOVIN RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
           Full=Methionine--tRNA ligase 2; AltName:
           Full=Mitochondrial methionine--tRNA ligase;
           Short=MtMetRS; Flags: Precursor
 gi|148878169|gb|AAI46212.1| MARS2 protein [Bos taurus]
 gi|296490436|gb|DAA32549.1| methionyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
          Length = 593

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 326 GAGMSPPHRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 375


>gi|15967084|ref|NP_387437.1| leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|307302546|ref|ZP_07582303.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
 gi|307316123|ref|ZP_07595567.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|32171577|sp|Q92KW8|SYL_RHIME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15076357|emb|CAC47910.1| Probable leucyl-tRNA synthetase [Sinorhizobium meliloti 1021]
 gi|306897963|gb|EFN28705.1| leucyl-tRNA synthetase [Sinorhizobium meliloti AK83]
 gi|306903216|gb|EFN33806.1| leucyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
          Length = 876

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 58/182 (31%), Gaps = 51/182 (28%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAE 331
            KMSKS  N +  ++++        S+ A   R  +L      P D    ++   +  A 
Sbjct: 631 EKMSKSKKNVVDPDDIIG-------SYGADTARFFVLS---DSPPDRDVIWSEAGVEGAH 680

Query: 332 ILLSK----WPQTSTSKGIIDPA-------------------VLSALYNDLNTVSAIQAL 368
             + +      + +     +D A                    + A Y+ L    A+  +
Sbjct: 681 RFVQRVWRLLTEAAERLRAVDAAPASGGEGLAVSQAAHRTLKAVEADYDKLAFNKAVARI 740

Query: 369 HKLARE----------STKNHDLLPIFNASAHIL--GIEVCKEHLNKNISIAI--EKLVQ 414
           ++L                ++ L      +A IL   I     HL +     I  + L+ 
Sbjct: 741 YELVNAMAAPLTQVASGKADNALTAAVKDAAAILINLIAPMMPHLAEECWREIGGKGLIA 800

Query: 415 ER 416
           ER
Sbjct: 801 ER 802


>gi|332523844|ref|ZP_08400096.1| isoleucine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
 gi|332315108|gb|EGJ28093.1| isoleucine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
          Length = 933

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 13/144 (9%)

Query: 21  IDPSNIRMYV-CGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITD 74
           ++      ++  GP  Y     H+G+A   I  D++ R       +           +  
Sbjct: 43  LNEGKPSFHLHDGP-PYANGNIHVGHALNKISKDIIVRAKSMSGYQAPYVPGWDTHGLP- 100

Query: 75  IDDKIIERA--RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
           I+  + ++   R+E       D          ++  +D  RL   A    P  T    + 
Sbjct: 101 IEQVLAKKGVKRKEMDLAEYLDMCRDYAMSQVEKQREDFKRLGVSADWDNPYITLMPEYE 160

Query: 130 PQMIYLIQNIILHGHAYEANNEII 153
              I +   +   G+ Y     + 
Sbjct: 161 ANQIRVFGAMADKGYIYRGAKPVY 184



 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 18/141 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNTILPSDV-------TKQYGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
                   +  ++  L +      K   T           L A  +D N  +      + 
Sbjct: 623 TSVDTDNDVRVSMDILGQVSETYRKIRNTLR--------FLIANTSDFN-PNLDTVPFEN 673

Query: 372 ARESTKNHDLLPIFNASAHIL 392
              + K   +   FN    + 
Sbjct: 674 LSAADKYMTIK--FNKLVEVF 692


>gi|313618762|gb|EFR90666.1| valyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 882

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 485 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 542

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 543 -----KYGADSLRYTLATGS--SPGQDLKFSFEKVESTWNFINKIWNASR 585


>gi|289434832|ref|YP_003464704.1| hypothetical protein lse_1467 [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171076|emb|CBH27618.1| valS [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 882

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 485 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 542

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 543 -----KYGADSLRYTLATGS--SPGQDLKFSFEKVESTWNFINKIWNASR 585


>gi|260888326|ref|ZP_05899589.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861862|gb|EEX76362.1| valine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 892

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              +++IH    + EGRKMSKS GN I   E+++        + A  +R  ++  +   P
Sbjct: 515 PFHHVFIHGLVRDSEGRKMSKSLGNGIDPVEVID-------KYGADTLRFMLITGN--TP 565

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +R+  A    +K    S 
Sbjct: 566 GNDMRFYWERVEAARNFANKLWNASR 591


>gi|260582922|ref|ZP_05850706.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
 gi|260094022|gb|EEW77926.1| methionyl-tRNA synthetase [Haemophilus influenzae NT127]
          Length = 682

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 64/192 (33%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++          I+ + +   +
Sbjct: 393 SRNAGFIAKRFEGKLSDKLEDEALFAEFTAQAEQIAAYYESREYNKTIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKSPWVIAK 464


>gi|270307623|ref|YP_003329681.1| leucyl-tRNA synthetase [Dehalococcoides sp. VS]
 gi|270153515|gb|ACZ61353.1| leucyl-tRNA synthetase [Dehalococcoides sp. VS]
          Length = 813

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 36/181 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       +            E    ++ + G +    +KMSKS G
Sbjct: 528 PVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPFKKLF-NQGIIVSNHQKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +T + L+              +R   M +  + +  ++    L+     L++     T
Sbjct: 587 NVVTPDNLVAEVGT-------DAVRAYLMFVGPWDQGGEWNDSGLSGMSRWLNRVWNLFT 639

Query: 343 SKGIIDPAVLSA----------------LYND---LNTVSAIQALHKLARESTKNHDLLP 383
            +     A   A                +  +    NTV  + AL +L+    K  +   
Sbjct: 640 EEYTPKTASAEAERELKRTLHQTIKKITMDIERLRFNTV--VAALMELSNSLAKFKEAAA 697

Query: 384 I 384
           I
Sbjct: 698 I 698


>gi|20088942|ref|NP_615017.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
 gi|23822191|sp|Q8TUM3|SYR_METAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19913789|gb|AAM03497.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
          Length = 567

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI--IERARQEHPSIPI 92
                H+G+ R  I+ D L R+LR    +  V Y  N  D+  +I  +  A +       
Sbjct: 123 PNGPLHVGHIRNSIIGDTLARILRRAGYDVEVQYYVN--DMGRQIAVVSWACERFELDLS 180

Query: 93  NDAISIITSKNTQQ 106
             + + I     + 
Sbjct: 181 RKSDAAIADVYIKA 194


>gi|324989810|gb|EGC21753.1| glutamate--tRNA ligase [Streptococcus sanguinis SK353]
 gi|325686639|gb|EGD28665.1| glutamate--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 485

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 68/396 (17%), Positives = 123/396 (31%), Gaps = 76/396 (19%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERAR 84
           Y   PT     HIGNAR  +     Y   R+Y G    T++  I D D     +  ER++
Sbjct: 9   YAPSPT--GLLHIGNARTALF---NYLYARHYGG----TFIIRIEDTDRKRHVEDGERSQ 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
            E+    +          +                    R +  +      ++ ++  G 
Sbjct: 60  LENLRW-LGIDWDESPETHENY-----------------RQSERLDIYQKYVKELLDKGL 101

Query: 145 A---YEANNEIIFDTSSIPNYGSFSR-----RKIDEQKMGTRVPEKYHKKNPADFIL--- 193
           A   Y    E+  +       G   R       + E++    + E+          L   
Sbjct: 102 AYKSYVTEEELAAERERQEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVN 161

Query: 194 ------WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-LGKVFDIHGGGLDLIFP--- 243
                 W      E  +E   G     W I+       Y    V D H   +  +     
Sbjct: 162 ETGVYKWTDIVKGEIEFEG--GNIGGDWVIQKKDGYPTYNFAVVIDDHLMEISHVIRGDD 219

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLETKKFGGRS 301
           H  N   Q    + +   A  + H   +  +  G+K+SK + N      L   + +  + 
Sbjct: 220 HIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNT-----LQFIEDYRKKG 274

Query: 302 WPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN- 357
           +    +   + +  +    +   F+ Q L E    L    + S S    D   L  + N 
Sbjct: 275 YLPEAVFNFIALLGWNPGGEHEIFSRQELIE----LFDEKRLSKSPAAFDQKKLDWMNNE 330

Query: 358 -----DLNTVSAIQ--ALHKLARESTKNHDLLPIFN 386
                D +T+ A+    L +  R + K   L+ ++ 
Sbjct: 331 YIKNADFDTIFALAKPYLEEAGRLTDKAEKLVELYK 366


>gi|320450562|ref|YP_004202658.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
 gi|320150731|gb|ADW22109.1| valyl-tRNA synthetase [Thermus scotoductus SA-01]
          Length = 891

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 53/145 (36%), Gaps = 25/145 (17%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMT 314
                  + +H   L+ +G+KMSKS GN I   E++E        + A  +R A+  L T
Sbjct: 537 GERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVER-------YGADALRFALTYLTT 589

Query: 315 H---YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-----LYNDLNTVSAIQ 366
                R  + +    L  A    +K    +    +   A  +      L +         
Sbjct: 590 GGQDIRLDLRW----LEMARNFANKLYNAARFVLLSREAFQAKADEPTLADRFMQSR--- 642

Query: 367 ALHKLARESTKNHDLLPIFNASAHI 391
            L +   E T+ ++ L +  A+  +
Sbjct: 643 -LSRGVAEITRLYEALDLAQAAREV 666


>gi|257428538|ref|ZP_05604936.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275379|gb|EEV06866.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|253688194|ref|YP_003017384.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511652|sp|C6DFD9|SYR_PECCP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|251754772|gb|ACT12848.1| arginyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 576

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 4/121 (3%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           N L         ++P  I +    P V    H+G+ R  I+ D   R L +      V  
Sbjct: 98  NALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLG--HNVIR 155

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
             ++ D   +              N +   ++    + F ++  +          RA  +
Sbjct: 156 ANHVGDWGTQFGMLIAYLEKMQNENASEMDLSD--LEAFYREAKKHYDDDADFAERARGY 213

Query: 129 I 129
           +
Sbjct: 214 V 214


>gi|16800655|ref|NP_470923.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|81526882|sp|Q92BG2|SYV_LISIN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16414074|emb|CAC96818.1| valyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 882

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 485 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 542

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 543 -----KYGADSLRYTLATGS--SPGQDLKFSFEKVESTWNFINKIWNASR 585


>gi|15604929|ref|NP_219713.1| leucyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|6919979|sp|O84211|SYL_CHLTR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3328616|gb|AAC67801.1| Leucyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
 gi|297748339|gb|ADI50885.1| Leucyl-tRNA synthetase [Chlamydia trachomatis D-EC]
 gi|297749219|gb|ADI51897.1| Leucyl-tRNA synthetase [Chlamydia trachomatis D-LC]
          Length = 819

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 18/139 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      I         
Sbjct: 48  HVGHLIGYTATDIVARYKRAQGF--SVLHPMGWDSFGLPAEQYA------IRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN   F K  T +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TEKNIANFKKQLTAMGFSYDESREFAT-SDPEYYKWTQKLFLILYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQ 173
            +  P  G+  S  +I+  
Sbjct: 155 VNYCPELGTVLSNEEIENG 173


>gi|89098730|ref|ZP_01171612.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
 gi|89086692|gb|EAR65811.1| isoleucyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
          Length = 923

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 42/126 (33%), Gaps = 20/126 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   L+ EGRKMSKS GN +   +++           A ++RL +
Sbjct: 568 SVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVMNQLG-------ADILRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVSAIQALH 369
               Y+  +  +   L +   +  K   T              L N  D N       + 
Sbjct: 621 ASVDYQADVRVSDPILKQVAEVYRKIRNT----------FRFLLGNLADFN-PEKDAVVF 669

Query: 370 KLARES 375
           +  RE 
Sbjct: 670 ENLREV 675


>gi|319639015|ref|ZP_07993773.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317399919|gb|EFV80582.1| leucyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 936

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 46/156 (29%), Gaps = 24/156 (15%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L   A   + 
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGF-AIDWER 123

Query: 124 RATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
                 P+     Q     +   G  Y  N  + +D
Sbjct: 124 EVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159



 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 47/149 (31%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 693 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 745

Query: 335 SKW----PQTSTSKGIIDP--------------------AVLSALYND------LNTVSA 364
            +      +     G +                      A  + + +D       NT  A
Sbjct: 746 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 803

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K           A  +L
Sbjct: 804 IAAVMELLNQYDKTDTGSEQGRTVAQEVL 832


>gi|307710823|ref|ZP_07647251.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
 gi|307617429|gb|EFN96601.1| valyl-tRNA synthetase [Streptococcus mitis SK321]
          Length = 883

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 492 IFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|283770836|ref|ZP_06343728.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460983|gb|EFC08073.1| leucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 805

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 15/132 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  ++++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDDIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLS 353
              G +   +++
Sbjct: 637 NEDGTLSSKIVT 648


>gi|255348566|ref|ZP_05380573.1| leucyl-tRNA synthetase [Chlamydia trachomatis 70]
 gi|255503106|ref|ZP_05381496.1| leucyl-tRNA synthetase [Chlamydia trachomatis 70s]
          Length = 819

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 18/139 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      I         
Sbjct: 48  HVGHLIGYTATDIVARYKRAQGF--SVLHPMGWDSFGLPAEQYA------IRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN   F K  T +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TEKNIANFKKQLTAMGFSYDESREFAT-SDPEYYKWTQKLFLILYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQ 173
            +  P  G+  S  +I+  
Sbjct: 155 VNYCPELGTVLSNEEIENG 173


>gi|255311009|ref|ZP_05353579.1| leucyl-tRNA synthetase [Chlamydia trachomatis 6276]
 gi|255317310|ref|ZP_05358556.1| leucyl-tRNA synthetase [Chlamydia trachomatis 6276s]
 gi|255506784|ref|ZP_05382423.1| leucyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
 gi|289525247|emb|CBJ14723.1| leucyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
 gi|296434795|gb|ADH16973.1| leucyl-tRNA synthetase [Chlamydia trachomatis E/150]
 gi|296435724|gb|ADH17898.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/9768]
 gi|296436648|gb|ADH18818.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/11222]
 gi|296437584|gb|ADH19745.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/11074]
 gi|296438515|gb|ADH20668.1| leucyl-tRNA synthetase [Chlamydia trachomatis E/11023]
 gi|297140083|gb|ADH96841.1| leucyl-tRNA synthetase [Chlamydia trachomatis G/9301]
          Length = 819

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 18/139 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      I         
Sbjct: 48  HVGHLIGYTATDIVARYKRAQGF--SVLHPMGWDSFGLPAEQYA------IRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN   F K  T +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TEKNIANFKKQLTAMGFSYDESREFAT-SDPEYYKWTQKLFLILYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQ 173
            +  P  G+  S  +I+  
Sbjct: 155 VNYCPELGTVLSNEEIENG 173


>gi|254361962|ref|ZP_04978093.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
 gi|153093509|gb|EDN74489.1| methionine--tRNA ligase [Mannheimia haemolytica PHL213]
          Length = 692

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 51/185 (27%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  N  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQANTYL- 346

Query: 294 TKKFGGRSWPAPVIRLAMLMTHY------R-EPIDFTVQRLTE----------------- 329
                 +      +R       Y      R E +DF +    +                 
Sbjct: 347 ------KHLDPECLRYY-----YAAKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRN 395

Query: 330 ----AEILLSKWPQTSTSKGIIDPAVLSA--LYN-----DLNTVSAIQALHKLARESTKN 378
               A+    K  +    + + +     A  + N     + N   AI+A+ +L  ++ K 
Sbjct: 396 ASFIAKRFEGKLAEKLDDEALFNEFTAQAETIANFYENREFN--KAIRAIMELTDKANKY 453

Query: 379 HDLLP 383
            D   
Sbjct: 454 IDDKA 458


>gi|109730205|gb|AAI12413.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 20/153 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + D + R  +             + +           E+ +I  N      
Sbjct: 97  HMGHVRVYTLSDTIARFQKMRG--------MQVINPMGWDAFGLPAENAAIERNLHPESW 148

Query: 100 TSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-I 153
           T  N +   K   RL  C +   +   T  +P      Q     +   G AY+    +  
Sbjct: 149 TQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNW 206

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                       +  +++E     R   K  KK
Sbjct: 207 DPVDQT----VLANEQVNEYGCSWRSGAKVEKK 235


>gi|109730423|gb|AAI11893.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 20/153 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + D + R  +             + +           E+ +I  N      
Sbjct: 97  HMGHVRVYTLSDTIARFQKMRG--------MQVINPMGWDAFGLPAENAAIERNLHPESW 148

Query: 100 TSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-I 153
           T  N +   K   RL  C +   +   T  +P      Q     +   G AY+    +  
Sbjct: 149 TQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNW 206

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                       +  +++E     R   K  KK
Sbjct: 207 DPVDQT----VLANEQVNEYGCSWRSGAKVEKK 235


>gi|23346617|ref|NP_694808.1| probable leucyl-tRNA synthetase, mitochondrial precursor [Mus
           musculus]
 gi|48428659|sp|Q8VDC0|SYLM_MOUSE RecName: Full=Probable leucyl-tRNA synthetase, mitochondrial;
           AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
           Precursor
 gi|18250728|emb|CAD20988.1| leucyl-tRNA synthetase [Mus musculus]
 gi|51330502|gb|AAH80303.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|148877726|gb|AAI45983.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
 gi|223459884|gb|AAI38207.1| Leucyl-tRNA synthetase, mitochondrial [Mus musculus]
          Length = 902

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 20/153 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + D + R  +             + +           E+ +I  N      
Sbjct: 97  HMGHVRVYTLSDTIARFQKMRG--------MQVINPMGWDAFGLPAENAAIERNLHPESW 148

Query: 100 TSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-I 153
           T  N +   K   RL  C +   +   T  +P      Q     +   G AY+    +  
Sbjct: 149 TQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNW 206

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                       +  +++E     R   K  KK
Sbjct: 207 DPVDQT----VLANEQVNEYGCSWRSGAKVEKK 235


>gi|15827034|ref|NP_301297.1| methionyl-tRNA synthetase [Mycobacterium leprae TN]
 gi|25009393|sp|Q9CD55|SYM_MYCLE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|13092581|emb|CAC29746.1| putative methionyl-tRNA synthase [Mycobacterium leprae]
          Length = 537

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 41/121 (33%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     VR +T  D+  ++ A+    +       + 
Sbjct: 17  PHIGHAYEYIATDAIARFKRLDGLD-----VRFLTGTDEHGLKVAQ---AAEAAGVPTAQ 68

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+  F +    L   +     R T  +H      + + +   G  Y       +  
Sbjct: 69  LARRNSGVFQRMQEALHI-SFDRFIRTTDADHYKAAKEIWRRMDAAGDIYLGTYSGWYSV 127

Query: 157 S 157
            
Sbjct: 128 R 128


>gi|163939986|ref|YP_001644870.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
 gi|163862183|gb|ABY43242.1| isoleucyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|330838350|ref|YP_004412930.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746114|gb|AEB99470.1| Valyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 886

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              +++IH    + EGRKMSKS GN I   E+++        + A  +R  ++  +   P
Sbjct: 509 PFHHVFIHGLVRDSEGRKMSKSLGNGIDPVEVID-------KYGADTLRFMLITGN--TP 559

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +R+  A    +K    S 
Sbjct: 560 GNDMRFYWERVEAARNFANKLWNASR 585


>gi|328944631|gb|EGG38792.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 485

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 69/396 (17%), Positives = 123/396 (31%), Gaps = 76/396 (19%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERAR 84
           Y   PT     HIGNAR  +     Y   R+Y G    T++  I D D     +  ER++
Sbjct: 9   YAPSPT--GLLHIGNARTALF---NYLYARHYGG----TFIIRIEDTDRKRHVEDGERSQ 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
            E+    +          +                    R +  +      ++ ++  G 
Sbjct: 60  LENLRW-LGIDWDESPETHENY-----------------RQSERLDIYQKYVKELLDKGL 101

Query: 145 A---YEANNEIIFDTSSIPNYGSFSR-----RKIDEQKMGTRVPEKYHKKNPADFIL--- 193
           A   Y    E+  +       G   R       + E++    + E+          L   
Sbjct: 102 AYKSYVTEEELAAERERQEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVN 161

Query: 194 ------WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-LGKVFDIHGGGLDLIFP--- 243
                 W      E  +E   G     W I+       Y    V D H   +  +     
Sbjct: 162 ETGVYKWTDIVKGEIEFEG--GNIGGDWVIQKKDGYPTYNFAVVIDDHLMEISHVIRGDD 219

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLETKKFGGRS 301
           H  N   Q    + I   A  + H   +  +  G+K+SK + N      L   + +  + 
Sbjct: 220 HIANTPKQLMVYEAIGWEAPEFGHMTLIINSETGKKLSKRDTNT-----LQFIEDYRKKG 274

Query: 302 WPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN- 357
           +    +   + +  +    +   F+ Q L E    L    + S S    D   L  + N 
Sbjct: 275 YLPEAVFNFIALLGWNPGGEHEIFSRQELIE----LFDEKRLSKSPAAFDQKKLDWMNNE 330

Query: 358 -----DLNTVSAIQ--ALHKLARESTKNHDLLPIFN 386
                D +T+ A+    L +  R + K   L+ ++ 
Sbjct: 331 YIKNADFDTIFALAKPYLEEAGRLTDKAEKLVELYK 366


>gi|330792100|ref|XP_003284128.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
 gi|325085942|gb|EGC39340.1| hypothetical protein DICPUDRAFT_75115 [Dictyostelium purpureum]
          Length = 1010

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 15/199 (7%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S          N+  H   L+ +G KMSKS GN I  + +
Sbjct: 609 DIYLEGSDQHRGWFQSSLLTSVFVRDTAPYKNVVTHGFLLDEKGFKMSKSLGNVIDQSFV 668

Query: 292 LETKKFGGR--SWPAPVIRLAMLMTHYREPI----DFTVQRLTEAEILLSKWPQTSTSKG 345
           ++      +  ++   ++R  +  + Y + I    +  V+ L   + + + +     S  
Sbjct: 669 IKGGANKNQDPAYGIDILRTWIASSDYTKDISIGPNILVKILENIKKIRNSFKFMLGSNF 728

Query: 346 IIDPAVLSALYNDLNTVS--AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
             +PA  S  Y+ ++ +   A+     L +  T ++D        + +L       +   
Sbjct: 729 DFNPATDSVPYDQMSLIDKYALHKAQALQKSVTNHYDNFQFQKVLSDVL-------NFTG 781

Query: 404 NISIAIEKLVQERLILLKM 422
             S    +++++RL + K 
Sbjct: 782 ETSAFYFEIIKQRLYIEKA 800


>gi|298710134|emb|CBJ31846.1| Valine--tRNA ligase [Ectocarpus siliculosus]
          Length = 1036

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/151 (16%), Positives = 47/151 (31%), Gaps = 16/151 (10%)

Query: 14  KITEFQAIDPSNIRMYV---CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F+       + YV     P V  + H+G+A    + D+L R  R           +
Sbjct: 143 EKGYFKPGGDPKKKSYVVPMPPPNVTGYLHMGHAMGTTLQDILTRYHRMRGEPTLFLPGQ 202

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD--------TTRLACLAPTHQ 122
           +   I  +++         I   +       K   ++ +D          RL   A   +
Sbjct: 203 DHAGIATQMLVERALAAEGIDRKEIGREAFLKKVWEWKEDKGGYIVRQMRRLGASADWSR 262

Query: 123 PRATNHIPQMIYLIQ----NIILHGHAYEAN 149
            R T   P+M   +      +   G  Y  +
Sbjct: 263 ERFTLD-PEMSAAVTEAFVRLHEKGLVYRGD 292


>gi|261493681|ref|ZP_05990200.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494348|ref|ZP_05990842.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309997|gb|EEY11206.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261310681|gb|EEY11865.1| methionine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 692

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 51/185 (27%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  N  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQANTYL- 346

Query: 294 TKKFGGRSWPAPVIRLAMLMTHY------R-EPIDFTVQRLTE----------------- 329
                 +      +R       Y      R E +DF +    +                 
Sbjct: 347 ------KHLDPECLRYY-----YAAKLNDRIEDLDFNLDDFVQRVNSDIVNKLVNLASRN 395

Query: 330 ----AEILLSKWPQTSTSKGIIDPAVLSA--LYN-----DLNTVSAIQALHKLARESTKN 378
               A+    K  +    + + +     A  + N     + N   AI+A+ +L  ++ K 
Sbjct: 396 ASFIAKRFEGKLAEKLDDEALFNEFTAQAETIANFYENREFN--KAIRAIMELTDKANKY 453

Query: 379 HDLLP 383
            D   
Sbjct: 454 IDDKA 458


>gi|257463901|ref|ZP_05628287.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317061430|ref|ZP_07925915.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313687106|gb|EFS23941.1| valyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 887

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 24/121 (19%)

Query: 260 KTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR- 317
              N++ H G +  + GRKMSKS GN     +L+E        + A  IR +M+   Y  
Sbjct: 511 PFRNVFFH-GIVRDDLGRKMSKSLGNSPDPLDLIE-------QYGADAIRFSMI---YNT 559

Query: 318 ---EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN-DLNTVSAIQALHKLAR 373
              + + F+ + L       +K    S         V+  L + D+NT    +  ++L  
Sbjct: 560 SQGQDVRFSEKLLEMGRNFANKIWNASR-------FVMMNLEDFDINTFDEKEVKYELVD 612

Query: 374 E 374
           E
Sbjct: 613 E 613


>gi|206975087|ref|ZP_03236001.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217959724|ref|YP_002338276.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|229138915|ref|ZP_04267494.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
 gi|206746508|gb|EDZ57901.1| isoleucyl-tRNA synthetase [Bacillus cereus H3081.97]
 gi|217067167|gb|ACJ81417.1| isoleucyl-tRNA synthetase [Bacillus cereus AH187]
 gi|228644540|gb|EEL00793.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|52143260|ref|YP_083569.1| isoleucyl-tRNA synthetase [Bacillus cereus E33L]
 gi|81688177|sp|Q63BZ8|SYI2_BACCZ RecName: Full=Isoleucyl-tRNA synthetase 2; AltName: Full=IleRS 2;
           AltName: Full=Isoleucine--tRNA ligase
 gi|51976729|gb|AAU18279.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           cereus E33L]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|325295274|ref|YP_004281788.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065722|gb|ADY73729.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 546

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 31/90 (34%), Gaps = 3/90 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +V DVLYR++R    +    +  N      K++  +         
Sbjct: 126 PT--GPLHVGHGRGAVVGDVLYRVMRLTGYKPEREFYINDAGRQIKLLGVSIYARMKELS 183

Query: 93  NDAISIITSKNTQQF-VKDTTRLACLAPTH 121
            +           ++ ++    L    P  
Sbjct: 184 GENYPFPEDGYKGEYIIEVAKELLAERPEI 213


>gi|315925980|ref|ZP_07922185.1| isoleucyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315620801|gb|EFV00777.1| isoleucyl-tRNA synthetase [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 1042

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 24/149 (16%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ +++  L+ EG+KMSKS GN +    L +        + A  +R
Sbjct: 568 LAISTFITGKSPYHNVLVNDLVLDAEGQKMSKSKGNTVNPFALFD-------QYGADALR 620

Query: 309 LAML--MTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSKGIIDPAVLSALY-NDLNT 361
             ++     +  P  F  + L E                      D     AL  +    
Sbjct: 621 WYLMYVSPAW-TPTRFDEEGLKEVRSKFFNTFKNTYAFFALYANTDGIDADALAGDAFAV 679

Query: 362 VSA---------IQALHKLARESTKNHDL 381
             A         +   H+L R+ T   D 
Sbjct: 680 PVADRPVIDRWILSKYHRLVRDVTAAMDA 708


>gi|296272343|ref|YP_003654974.1| valyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
 gi|296096517|gb|ADG92467.1| valyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
          Length = 882

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 53/170 (31%), Gaps = 25/170 (14%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYR 317
              +I++H    +  G KMSKS GN I   +++E          A +IR  +  L    R
Sbjct: 526 PFEDIYMHALVRDEHGAKMSKSKGNVIDPLDMVEEH-------SADIIRFTLAYLAVQGR 578

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI---QALHKLARE 374
             I    + L +     +K    S    +           ++ T   I     L     E
Sbjct: 579 -DIKLGAKNLEQFRNFTNKLYNASNFLQLNVDTFPDLKDIEIKTPLGIYMQSRLSDAVDE 637

Query: 375 STKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
                D    FN +A IL     K   N+     IE            K 
Sbjct: 638 VRATLDTFK-FNEAASIL----YKFVWNEFCDWGIEY-------AKASKD 675


>gi|253990367|ref|YP_003041723.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781817|emb|CAQ84980.1| methionyl-tRNA synthetase [Photorhabdus asymbiotica]
          Length = 675

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFVH-GYVTVNGAKMSKSRGTFIKASTYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                     A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 349 -------HLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNSDIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  Q     A+   +  +      A   I+ + ++   ++++  
Sbjct: 400 INKRFSGKLADKLADPALYQKFIDGAKVIEEEFNNREFSKAIREIMTLADLANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|229059882|ref|ZP_04197257.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603]
 gi|228719427|gb|EEL71030.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH603]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|325690192|gb|EGD32196.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK115]
          Length = 930

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 68/178 (38%), Gaps = 19/178 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I+ +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTISPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTS----TSKGIIDPAVLSALYNDLNTVSAIQA 367
                   +  ++  L +      K   T      +    +P   +  Y DL +V     
Sbjct: 623 TSVDSSNDVRISMDILGQVSETYRKIRNTLRFLIANTSDFNPVEDAVAYEDLRSVDKYMT 682

Query: 368 LH-----KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL--VQERL 417
           +      +  R++  + + L I+ A  + + +++   +L+    +  IE    ++ R 
Sbjct: 683 IRFNQLVETIRKAYADFEFLTIYKAIVNFVTVDLSAFYLDFAKDVVYIEAAKSLERRQ 740


>gi|323137155|ref|ZP_08072234.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322397513|gb|EFY00036.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 877

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 11/105 (10%)

Query: 14  KITEFQA-IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F+A ++ S  + YV    P      H+G+ R   + DV+ R +R    +  V +  
Sbjct: 21  EKQVFKAGVNASAPKYYVLEMFPYPSGRLHMGHVRNYSMGDVIARYMRAKGYD--VLHPM 78

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                       A Q           +  T  N          L 
Sbjct: 79  GWDAFGLPAENAAAQTGAH------PATWTYANIAAMRAQLKTLG 117


>gi|317129281|ref|YP_004095563.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474229|gb|ADU30832.1| isoleucyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 920

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +  ++++       +   A ++RL +
Sbjct: 570 AVAVTGKAPYKTVLSHGFTLDGEGRKMSKSVGNVVVPDKVM-------KQLGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 623 SSVDYQADVRVSDNILKQVAEVYRKIRNT 651


>gi|229011487|ref|ZP_04168675.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
 gi|228749778|gb|EEL99615.1| Isoleucyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|229167050|ref|ZP_04294794.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621]
 gi|228616403|gb|EEK73484.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH621]
          Length = 1033

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|94496391|ref|ZP_01302968.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94424137|gb|EAT09161.1| methionyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 520

 Score = 39.5 bits (91), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 29/99 (29%), Gaps = 17/99 (17%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    +         T  D+  ++ A+              
Sbjct: 18  PHIGHAYEVIATDAIARFQRMMGRDVFFQ-----TGTDEHGLKMAQTARAR---GIEPRA 69

Query: 99  ITSKNTQQFVKDTTRLAC--------LAPTHQPRATNHI 129
           +  +    F      L            P H  RA+  I
Sbjct: 70  LADEMAGYFKVMNEALNISHDRFIRTSEPDHH-RASQAI 107



 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 39/149 (26%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-------THY-- 316
             +GFL   G KMSKS GN     EL +        +    +R  +L          Y  
Sbjct: 291 FGHGFLLNRGEKMSKSLGNVADPMELADR-------FGVDQLRYFLLSEVTFGNDGSYSA 343

Query: 317 -------REPIDFTVQRLTE------AEILLSKWPQTSTSK-------GIIDPA--VLSA 354
                     +  +   L +      A+ L  + P+ +  +       GI D      +A
Sbjct: 344 EAIIARSNSDLANSFGNLAQRTLSFIAKNLDGRLPEPAAMEVDSALLSGIADACRIFQNA 403

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLP 383
           + NDL    AI+A  +         D   
Sbjct: 404 M-NDLAPSVAIEAWMRAVFACNAYIDAQA 431


>gi|325478520|gb|EGC81632.1| leucine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 800

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 25/133 (18%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L  + +KMSKS GN I  ++++       R + A  +R   M M  +
Sbjct: 560 KEPYKKRTSHGMILGSDHQKMSKSRGNVINPDDII-------RDYGADTLRCYEMFMGDF 612

Query: 317 REPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVLSALYND-----LNT 361
                ++ + +      L +              S    ++    +  +  D      NT
Sbjct: 613 SSMAIWSDEGVRGCRKYLERVFNLNEIVENGDSYSKDLEVVINQTIKKVSEDYENLKFNT 672

Query: 362 VSAIQALHKLARE 374
             AI  L  L  E
Sbjct: 673 --AIAQLMTLLNE 683


>gi|307610052|emb|CBW99587.1| leucyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 823

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L+ T       + A   RL  M  +   + ++++ 
Sbjct: 564 LTQGMVLKDGHKMSKSLGNVVDPNHLINT-------YGADTARLFVMFASPPEQSLEWSD 616

Query: 325 QRLTEAEILLSK 336
             +  A   L +
Sbjct: 617 SGVEGAHRFLKR 628



 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 18/151 (11%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            K   F    D +  + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  HKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           +N+             E+ +I      +  T KN     +   RL   A   +   T   
Sbjct: 71  KNVLQPIGWDAFGLPAENAAIKNKIPPAEWTRKNIAAMKEQFLRLGN-AYDWKREITTCD 129

Query: 130 P-----QMIYLIQNIILHGHAYEANNEIIFD 155
           P     +  + I  +   G  Y+ N  + +D
Sbjct: 130 PEYYRWEQWFFI-RLFEKGLVYKKNAVVNWD 159


>gi|261867564|ref|YP_003255486.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261412896|gb|ACX82267.1| methionyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 686

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 33/193 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    AD  +  +NI++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIMYFHSLFWPAMLEGADFRKP-SNIFVH-GYVTVNGEKMSKSRGTFIQAATYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +      +R      L    R + +D  ++   +      ++K     S + G 
Sbjct: 348 ------KYLDPECLRYYYAAKLSN--RIDDLDLNLEDFVQRVNTDLVNKLVNLASRNAGF 399

Query: 347 IDPAV---LSALYNDLNTVSAIQALHK----LARESTKNHDLLPIFNASAHILGI-EVCK 398
           I       L+A  +D       QAL       + +    ++      A   I+ + +   
Sbjct: 400 IQKRFDGKLAASLDD-------QALFDEFIAQSEQIAAYYENREFGKAIREIMALTDKAN 452

Query: 399 EHLNKNISIAIEK 411
           ++++  +   I K
Sbjct: 453 KYIDDKVPWVIAK 465


>gi|294877102|ref|XP_002767901.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239869864|gb|EER00619.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 162

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 9/41 (21%), Positives = 15/41 (36%)

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
             +I   +       K  ++F++D   L    PT   R T 
Sbjct: 122 GATIEDKEIFYAHARKYEKEFLEDCESLGIREPTVMTRITE 162


>gi|289165660|ref|YP_003455798.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
 gi|288858833|emb|CBJ12747.1| leucyl-tRNA synthetase [Legionella longbeachae NSW150]
          Length = 824

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L+ T       + A   RL  M      + ++++ 
Sbjct: 565 LTQGMVLKDGHKMSKSVGNVVDPNHLINT-------YGADTARLFVMFAAPPEQSLEWSD 617

Query: 325 QRLTEAEILLSKW 337
             +  A   L + 
Sbjct: 618 TAVEGAHRFLKRI 630



 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 49/151 (32%), Gaps = 18/151 (11%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            K   F  + D +  + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  HKKQSFNVSEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           +N+             E+ +I      +  T KN +   K   RL   A   +   +   
Sbjct: 71  KNVLQPIGWDAFGLPAENAAIKNGIPPAEWTKKNIESMKKQFLRLGN-AYDWRREISTCT 129

Query: 130 P-----QMIYLIQNIILHGHAYEANNEIIFD 155
           P     +  + I  +   G  Y+ N  + +D
Sbjct: 130 PEYYRWEQWFFI-RLFEKGLVYKKNAVVNWD 159


>gi|282897045|ref|ZP_06305047.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
 gi|281197697|gb|EFA72591.1| Isoleucyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
          Length = 965

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 2/99 (2%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A     L    D++  G D      ++ +  S   + I     +  H   L+ +GRKMS
Sbjct: 556 VANQRQELTYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEQGRKMS 615

Query: 280 KSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMTHY 316
           KS GN +    ++   K   +  ++ A V+RL +    Y
Sbjct: 616 KSIGNVVDPQIIINGGKDQKKDPAYGADVLRLWVSSVDY 654


>gi|270159542|ref|ZP_06188198.1| leucyl-tRNA synthetase [Legionella longbeachae D-4968]
 gi|269987881|gb|EEZ94136.1| leucyl-tRNA synthetase [Legionella longbeachae D-4968]
          Length = 795

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L+ T       + A   RL  M      + ++++ 
Sbjct: 536 LTQGMVLKDGHKMSKSVGNVVDPNHLINT-------YGADTARLFVMFAAPPEQSLEWSD 588

Query: 325 QRLTEAEILLSKW 337
             +  A   L + 
Sbjct: 589 TAVEGAHRFLKRI 601



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 47/146 (32%), Gaps = 23/146 (15%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
             +F  +      M+   P      H+G+ R   + DV+ R  R           +N+  
Sbjct: 3   KEKFYCL-----SMF---PYPSGTLHMGHVRNYTIGDVIARYQRALG--------KNVLQ 46

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP---- 130
                      E+ +I      +  T KN +   K   RL   A   +   +   P    
Sbjct: 47  PIGWDAFGLPAENAAIKNGIPPAEWTKKNIESMKKQFLRLGN-AYDWRREISTCTPEYYR 105

Query: 131 -QMIYLIQNIILHGHAYEANNEIIFD 155
            +  + I  +   G  Y+ N  + +D
Sbjct: 106 WEQWFFI-RLFEKGLVYKKNAVVNWD 130


>gi|255076485|ref|XP_002501917.1| methionyl-tRNA synthetase [Micromonas sp. RCC299]
 gi|226517181|gb|ACO63175.1| methionyl-tRNA synthetase [Micromonas sp. RCC299]
          Length = 931

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 36/99 (36%), Gaps = 15/99 (15%)

Query: 233 IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITIN 289
           +H  G D+I+ H         C               +GF+   +G+KMSKS GN +   
Sbjct: 480 VHIIGKDIIWFH----CVIWPCMLWSAGLPLPKTVFGHGFVTAADGQKMSKSIGNVVDPM 535

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRL 327
           + L         + +   R  ++    Y   + F+   L
Sbjct: 536 DQLTR-------YSSDTFRYYLMRNAVYGSDVPFSESNL 567


>gi|187649790|sp|A4WCF6|SYM_ENT38 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 677

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 69/186 (37%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 292 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 349

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 350 -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 400

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       +  +L   +  +     A    +  +      A   I+ + ++   ++++  
Sbjct: 401 IGKRFDGVMAAELADPALYKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQA 460

Query: 406 SIAIEK 411
              + K
Sbjct: 461 PWVVAK 466


>gi|146312363|ref|YP_001177437.1| methionyl-tRNA synthetase [Enterobacter sp. 638]
 gi|145319239|gb|ABP61386.1| methionyl-tRNA synthetase [Enterobacter sp. 638]
          Length = 680

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 69/186 (37%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 295 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 352

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 353 -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 403

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       +  +L   +  +     A    +  +      A   I+ + ++   ++++  
Sbjct: 404 IGKRFDGVMAAELADPALYKTFTDAATAIGEAWEAREFGKAVREIMALADLANRYVDEQA 463

Query: 406 SIAIEK 411
              + K
Sbjct: 464 PWVVAK 469


>gi|118594231|ref|ZP_01551578.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
 gi|118440009|gb|EAV46636.1| arginyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
          Length = 552

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 48/145 (33%), Gaps = 21/145 (14%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   + D L RL  +   +    +  N        + ++ +      +
Sbjct: 125 PT--GPLHVGHGRGAAIGDCLARLFEFSGWDVTREFYYNDAGSQIDNLTKSIKARCMNVL 182

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
            +  S        +++ D  +                    YL +  I +G    ++N  
Sbjct: 183 PEDPSFPEDGYRGEYISDIAK-------------------SYLAKKTIQNGSETFSSNGD 223

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGT 177
             D  +I NYG    RK  +Q +  
Sbjct: 224 TTDDDAIKNYGIHYLRKEQDQDLEA 248


>gi|54294236|ref|YP_126651.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|60390669|sp|Q5WWZ8|SYL_LEGPL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53754068|emb|CAH15541.1| leucyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 823

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L+ T       + A   RL  M  +   + ++++ 
Sbjct: 564 LTQGMVLKDGHKMSKSLGNVVDPNHLINT-------YGADTARLFVMFASPPEQSLEWSD 616

Query: 325 QRLTEAEILLSK 336
             +  A   L +
Sbjct: 617 SGVEGAHRFLKR 628



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 18/151 (11%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            K   F    D +  + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  HKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           +N+             E+ +I      +  T KN     +   RL   A   +   T   
Sbjct: 71  KNVLQPIGWDSFGLPAENAAIKNKIPPAEWTRKNIAAMKEQFLRLGN-AYDWKREITTCD 129

Query: 130 P-----QMIYLIQNIILHGHAYEANNEIIFD 155
           P     +  + I  +   G  Y+ N  + +D
Sbjct: 130 PEYYRWEQWFFI-RLFEKGLVYKKNAVVNWD 159


>gi|20094194|ref|NP_614041.1| glutamyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|30316173|sp|Q8TXB7|SYE_METKA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|19887216|gb|AAM01971.1| Glutamyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 571

 Score = 39.5 bits (91), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 38/110 (34%), Gaps = 16/110 (14%)

Query: 13  RKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           R     + +   +P N+R+    P      HIG+AR  ++ D   R           T V
Sbjct: 83  RDKEGLKPLPGAEPGNVRL-RFAPNPSGPLHIGHARAAVLNDEYAR-------RYDGTLV 134

Query: 70  RNITD-----IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
             I D     +D +  +   ++   + +N     + S   + +      L
Sbjct: 135 LRIEDTDPRRVDPEAYDMIEEDLEWLGVNIDERYVQSNRIELYYMVCEEL 184


>gi|325294834|ref|YP_004281348.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325065282|gb|ADY73289.1| Isoleucyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 931

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 39/89 (43%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC   +     ++  H   L+ +G KMSKS GN +   +++       + + A ++RL +
Sbjct: 578 SCGTRKEAPYKSVLTHGFTLDEKGHKMSKSLGNVVAPEDVV-------KKFGADILRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
              ++ E +  +   L +   +  K   T
Sbjct: 631 ASENFTEDVKISENILKQVAEVYKKIRNT 659


>gi|321309631|ref|YP_004191960.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
 gi|319801475|emb|CBY92121.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
          Length = 557

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  I  D L  LL Y        Y+ N
Sbjct: 127 PT--GLLHIGHARNGIFSDTLANLLEYGGYFVHREYLVN 163


>gi|292657053|ref|YP_003536950.1| valyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291372246|gb|ADE04473.1| valyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 870

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 29/89 (32%), Gaps = 5/89 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-----QEH 87
           PTV    H G+     + D + R  R    E    +  +   I  +++         Q++
Sbjct: 45  PTVSGSLHWGHVYGFTLQDFVARFTRMRGDEVYFPFGYDDNGIASELLTEDELGIKHQDY 104

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLAC 116
                      +T++   +F +    L  
Sbjct: 105 ERREFQKLCREVTAEYESEFTEKMQNLGI 133


>gi|238650531|ref|YP_002916383.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259511656|sp|C4K184|SYR_RICPU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|238624629|gb|ACR47335.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 576

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVN 164


>gi|238062128|ref|ZP_04606837.1| glutamyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237883939|gb|EEP72767.1| glutamyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 470

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 54/305 (17%), Positives = 94/305 (30%), Gaps = 73/305 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P+     H+GNAR ++   VL R  R        T V  I D D      A +  P    
Sbjct: 15  PSPTGMFHVGNARSVLFNWVLARQSR-------GTMVLRIEDTD------AARNRPEWGQ 61

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQ-PR-ATNHIPQMIYLIQNIILHGHAYEAN- 149
                          +     L      ++ P   +++ PQ    I  ++  G AY  + 
Sbjct: 62  GI-------------LDAMEWLGIGPSEYEGPLFQSDYAPQHREAIDRLLAAGRAYYCDC 108

Query: 150 --NEIIFDTSSIPN-YGSFSR---RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
             +++I  T S    Y  F R   +   E +               D +        +P 
Sbjct: 109 IRDQVIARTGSEHKGYDGFCRDRGQTAGEGRALRFRTPDGGSTVIVDLV------RGKPT 162

Query: 204 WESPWGRGRPGWHIECSAMSSH------YLGKVFDIHGGGLDLIFP---HHENEIAQ--- 251
           +++          IE   ++         L  V D    G+  +     H  N   Q   
Sbjct: 163 FDNAL--------IEDFVIARGDGSPVFLLANVVDDMVMGITHVIRAEEHLPNAPKQQLL 214

Query: 252 SCCADRIEKTANIWIHNG-FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-L 309
                       +W+H    +N + +K+SK         + +  + F    + A  +R  
Sbjct: 215 WEALGAEPP---VWVHAPILVNEKRQKLSKR-------RDRVALEDFRAEGYLAEAMRNY 264

Query: 310 AMLMT 314
            ML+ 
Sbjct: 265 LMLLG 269


>gi|237804554|ref|YP_002888708.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231272854|emb|CAX09764.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 819

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 18/139 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      I         
Sbjct: 48  HVGHLIGYTATDIVARYKRAQGF--SVLHPMGWDSFGLPAEQYA------IRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN   F K  T +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TEKNIANFKKQLTAMGFSYDESREFAT-SDPEYYKWTQKLFLILYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQ 173
            +  P  G+  S  +I+  
Sbjct: 155 VNYCPELGTVLSNEEIENG 173


>gi|149184557|ref|ZP_01862875.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831877|gb|EDL50310.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 519

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 32/89 (35%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   +  DV+ R  R    +     VR  T  D+  ++ A++      +      
Sbjct: 18  PHIGHAYETVAADVIARFQRLMGRD-----VRFQTGTDEHGLKMAQKAR---DLGKTPRE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  + +  F     RL         R T+
Sbjct: 70  LADEMSGAFKDLFDRLDITY-DRFIRTTD 97


>gi|15892018|ref|NP_359732.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|21542254|sp|Q92JH2|SYR_RICCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|15619134|gb|AAL02633.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 576

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVN 164


>gi|323137650|ref|ZP_08072726.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322396947|gb|EFX99472.1| arginyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 593

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 59/360 (16%), Positives = 102/360 (28%), Gaps = 110/360 (30%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN--------------------- 71
           PT     H+G+ R  +  D L  LL +   E    Y  N                     
Sbjct: 139 PT--GPMHVGHGRGAVFGDALANLLAFSGCEVTREYYINDAGAQVDVLARSAFLRYREAL 196

Query: 72  ---------------ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF----VKDTT 112
                          +  + + + +   +E    P  + + ++  +           D  
Sbjct: 197 GETITIPEGLYPGDYLKPVGEALAKAHGRELLDRPEGEWLPVVRREAIDAMMDMIRDDLA 256

Query: 113 RLACLAPTHQPRATNH--------IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
            L           T H        I   I     +   G  Y     +      +P+   
Sbjct: 257 ALNIRHEIFFSERTLHDRSNGPSKIDAAIEW---LREKGLVY--EGRLPPPKGQLPDDWE 311

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
                 D ++   R  +     +  D  L K+S             G P +     A   
Sbjct: 312 ------DREQTLFRSTDFG---DDVDRAL-KKSD------------GSPTYFASDIAYHK 349

Query: 225 HYLGKVFDI--------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--E 274
             + + FD         HGG +          +  +  A    K A        + L   
Sbjct: 350 DKIDRGFDTLVDVWGADHGGYVKR--------MGAAVAALSGRKVALDVKLCQLVKLMRN 401

Query: 275 GR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTE 329
           G   KMSK  G+F+T+ E+++             +R  ML   YR+   P+DF + ++ E
Sbjct: 402 GEPVKMSKRAGDFVTLREVVDEVGV-------DAVRFMML---YRKNDAPLDFDLAKVIE 451


>gi|320094120|ref|ZP_08025933.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
 gi|319978922|gb|EFW10452.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
          Length = 909

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 35/172 (20%)

Query: 265 WIHNGF----LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
           W H G     L+ + +KMSKS GN +T   LLE        + +  +R        R  +
Sbjct: 604 WRHAGLSGWILDADHKKMSKSKGNVVTPMGLLE-------KYGSDAVRYWAASA--RLGL 654

Query: 321 D--FTVQRLT----EAEILLS--KWPQTSTSKG---IIDPAVLSALYNDLNTVSAIQALH 369
           D  F  Q++      A  +L+  K+  T   +G    +DPA+++    DL+       L 
Sbjct: 655 DAAFDEQQMKIGRRLAIKVLNASKFALTMGGEGAQLDLDPALVTV---DLDR----SVLA 707

Query: 370 KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
           +LA    +  D L  ++   H   +EV +          +E LV+ER    +
Sbjct: 708 ELAGVVAEATDALAAYD---HARALEVTESFFWTFCDDYLE-LVKERAYNRE 755


>gi|312149302|gb|ADQ29373.1| lysyl-tRNA synthetase [Borrelia burgdorferi N40]
          Length = 521

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|304439987|ref|ZP_07399880.1| leucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371479|gb|EFM25092.1| leucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 802

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 44/133 (33%), Gaps = 25/133 (18%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L     KMSKS GN I  ++++         + A  +R   M M  +
Sbjct: 562 KEPYKKRTSHGMILGSNSEKMSKSRGNVINPDDIVN-------EYGADTLRTYEMFMGDF 614

Query: 317 REPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVLSALYND-----LNT 361
            +   ++   +  A   L +    +           +   +    +  + +D      NT
Sbjct: 615 EKAAPWSTNGVKGARRFLDRVYGLAELINGESGYSKNLESLIHKTIKKVTDDYETLKFNT 674

Query: 362 VSAIQALHKLARE 374
             AI AL  L  E
Sbjct: 675 --AIAALMSLVNE 685


>gi|288817614|ref|YP_003431961.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787013|dbj|BAI68760.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751212|gb|ADO44695.1| valyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
          Length = 1008

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 58/151 (38%), Gaps = 14/151 (9%)

Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
           W  G  GW  E  A     L    D+   G D+IF      I             +++IH
Sbjct: 569 WPFGVFGWPEE--AQDLKNL-YPTDLLVTGFDIIFFWVARMIMMGTYFTGDVPFVDVYIH 625

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL--AMLMTHYREPIDFTVQ 325
               + +G+KMSK+ GN I   +++E        + A  +R   A+L    R  I  + +
Sbjct: 626 ALVRDEKGQKMSKTKGNVIDPLDIVER-------YGADALRFTLAILTQQGR-DIKLSEK 677

Query: 326 RLTEAEILLSK-WPQTSTSKGIIDPAVLSAL 355
           R    +   +K W         +D  +L+ L
Sbjct: 678 RFEGYKHFANKLWNAGRFILMNLDQDLLANL 708


>gi|210633886|ref|ZP_03297901.1| hypothetical protein COLSTE_01818 [Collinsella stercoris DSM 13279]
 gi|210159055|gb|EEA90026.1| hypothetical protein COLSTE_01818 [Collinsella stercoris DSM 13279]
          Length = 933

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 22/183 (12%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKIIERARQE 86
           Y  GP      H+G+A   I  D++ R       E       +     I+ K+ E+   E
Sbjct: 60  YANGP-----IHLGHAMNKISKDIINRYKAMQGFETPYVPGWDCHGQPIEHKVEEKLGTE 114

Query: 87  H----PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNI 139
                P   I +  +    +N     +   RL  L     P  T    H    I + + +
Sbjct: 115 KFNNTPVAKIRELCNEFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAADIEVFKAM 174

Query: 140 ILHGHAYEANNEIIFD-------TSSIPNYGSF-SRRKIDEQKMGTRVPEKYHKKNPADF 191
              G  Y  +  + +          +   YG   S       ++ ++         P DF
Sbjct: 175 FDKGMVYRGHKPVHWCKHCHTALAEAEIEYGDETSPSIYVRFELTSKPAGLESFDGPVDF 234

Query: 192 ILW 194
           ++W
Sbjct: 235 VIW 237


>gi|148358880|ref|YP_001250087.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|296106927|ref|YP_003618627.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|166231618|sp|A5IBJ1|SYL_LEGPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148280653|gb|ABQ54741.1| leucyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|295648828|gb|ADG24675.1| leucyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 823

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L+ T       + A   RL  M  +   + ++++ 
Sbjct: 564 LTQGMVLKDGHKMSKSLGNVVDPNHLINT-------YGADTARLFVMFASPPEQSLEWSD 616

Query: 325 QRLTEAEILLSK 336
             +  A   L +
Sbjct: 617 SGVEGAHRFLKR 628



 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 20/152 (13%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            K   F    D +  + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  HKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           +N+             E+ +I      +  T KN     +   RL         R     
Sbjct: 71  KNVLQPIGWDAFGLPAENAAIKNKIPPAEWTRKNIAAMKEQFLRLGN--AYDWKRELTTC 128

Query: 130 P------QMIYLIQNIILHGHAYEANNEIIFD 155
                  +  + I  +   G  Y+ N  + +D
Sbjct: 129 DPEYYRWEQWFFI-RLFEKGLVYKKNAVVNWD 159


>gi|119872100|ref|YP_930107.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
 gi|166232829|sp|A1RS32|SYR_PYRIL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|119673508|gb|ABL87764.1| arginyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
          Length = 632

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 18/91 (19%)

Query: 255 ADRIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELL----ETKKFGGRSWPAPV-- 306
           A   E  A   IH     +NL G KMS   G +I+++E+L    E      +     +  
Sbjct: 416 ALGYEDVAKKLIHYAYEMVNLPGMKMSARRGQYISLDEILDEAVERSADLVKEKNPEIAG 475

Query: 307 ----------IRLAMLMTHYREPIDFTVQRL 327
                     +R A L T  R+PI+F  + +
Sbjct: 476 IIAERVGVGSVRYAFLSTSPRKPIEFKWETV 506


>gi|76788931|ref|YP_328017.1| leucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|237802632|ref|YP_002887826.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
 gi|123744920|sp|Q3KMF3|SYL_CHLTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|76167461|gb|AAX50469.1| leucyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
 gi|231273866|emb|CAX10657.1| leucyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
          Length = 819

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 18/139 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      I         
Sbjct: 48  HVGHLIGYTATDIVARYKRAQGF--SVLHPMGWDSFGLPAEQYA------IRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN   F K  T +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TEKNIANFKKQLTAMGFSYDESREFAT-SDPEYYKWTQKLFLILYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQ 173
            +  P  G+  S  +I+  
Sbjct: 155 VNYCPELGTVLSNEEIENG 173


>gi|54297257|ref|YP_123626.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|60390670|sp|Q5X5L8|SYL_LEGPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|53751042|emb|CAH12453.1| leucyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 823

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L+ T       + A   RL  M  +   + ++++ 
Sbjct: 564 LTQGMVLKDGHKMSKSLGNVVDPNHLINT-------YGADTARLFVMFASPPEQSLEWSD 616

Query: 325 QRLTEAEILLSK 336
             +  A   L +
Sbjct: 617 SGVEGAHRFLKR 628



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 18/151 (11%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            K   F    D +  + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  HKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           +N+             E+ +I      +  T KN     +   RL   A   +   T   
Sbjct: 71  KNVLQPIGWDAFGLPAENAAIKNKIPPAEWTRKNIAAMKEQFLRLGN-AYDWKREITTCD 129

Query: 130 P-----QMIYLIQNIILHGHAYEANNEIIFD 155
           P     +  + I  +   G  Y+ N  + +D
Sbjct: 130 PEYYRWEQWFFI-RLFEKGLVYKKNAVVNWD 159


>gi|52841578|ref|YP_095377.1| leucyl-tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|60390674|sp|Q5ZVU2|SYL_LEGPH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|52628689|gb|AAU27430.1| leucyl tRNA synthetase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
          Length = 823

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 8/72 (11%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L+ T       + A   RL  M  +   + ++++ 
Sbjct: 564 LTQGMVLKDGHKMSKSLGNVVDPNHLINT-------YGADTARLFVMFASPPEQSLEWSD 616

Query: 325 QRLTEAEILLSK 336
             +  A   L +
Sbjct: 617 SGVEGAHRFLKR 628



 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 47/151 (31%), Gaps = 18/151 (11%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            K   F    D +  + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  HKKQSFNVTEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTLGDVIARYQRALG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
           +N+             E+ +I      +  T KN     +   RL   A   +   T   
Sbjct: 71  KNVLQPIGWDAFGLPAENAAIKNKIPPAEWTRKNIAAMKEQFLRLGN-AYDWKREITTCD 129

Query: 130 P-----QMIYLIQNIILHGHAYEANNEIIFD 155
           P     +  + I  +   G  Y+ N  + +D
Sbjct: 130 PEYYRWEQWFFI-RLFEKGLVYKKNAVVNWD 159


>gi|34580946|ref|ZP_00142426.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262331|gb|EAA25835.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 576

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +  DVL R+L+         Y  N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSYSVTKEYYVN 164


>gi|327542457|gb|EGF28936.1| methionyl tRNA synthetase [Rhodopirellula baltica WH47]
          Length = 679

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 56/187 (29%), Gaps = 48/187 (25%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
            + IH GFLN+ G+KMSKS+G F+     L       +      +R              
Sbjct: 315 KVHIH-GFLNVNGKKMSKSDGTFVKAETFL-------KHIDPSALRYFYAT--------- 357

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL-----NTVSAIQALHKLARESTK 377
                        K         +     +  + +DL     N  S +         +  
Sbjct: 358 -------------KLSSRVEDLDLGVDEFVEKVNSDLVGKVVNLASRVGKFASRTGLAPS 404

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK-----------MKKFS 426
             +   +F A+A   G E+   + +   S A+ +L+ E                  K   
Sbjct: 405 YPEDGGLFQAAAA-KGDEIASAYEDGEFSKAM-RLIMELADAANPFVEHAKPWEMNKDPE 462

Query: 427 SADYIRK 433
             D +R 
Sbjct: 463 RQDELRD 469


>gi|312958882|ref|ZP_07773401.1| Isoleucyl-tRNA synthetase 1 [Pseudomonas fluorescens WH6]
 gi|311286652|gb|EFQ65214.1| Isoleucyl-tRNA synthetase 1 [Pseudomonas fluorescens WH6]
          Length = 943

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 35/90 (38%), Gaps = 7/90 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C  D       +  H   ++  GRKMSKS  N I   ++ +T         A ++RL + 
Sbjct: 584 CAIDDHAPYRELLTHGFTVDETGRKMSKSLKNVIEPKKINDTLG-------ADIMRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            T Y   I  + Q L  +     +   T+ 
Sbjct: 637 STDYSGEIAVSDQILARSADAYRRIRNTAR 666


>gi|260438526|ref|ZP_05792342.1| leucine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
 gi|292809115|gb|EFF68320.1| leucine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
          Length = 800

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/214 (17%), Positives = 60/214 (28%), Gaps = 50/214 (23%)

Query: 195 KRSTPMEPGWESPWGRGRPGWH---------IECSAMSSHY-LGKVFDIHGGGLDLIFPH 244
           KR T   P W          W+          EC A           D + GG++ +  H
Sbjct: 487 KRETDTMPQWAGS------SWYFLRYIDPHNSECFADREKINYWMPVDWYNGGMEHVTRH 540

Query: 245 HENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
                            +  E  A        L  +G KMSKS GN I   +++      
Sbjct: 541 MIYSRFWHQFLYDLGLVNTSEPYAKRSAQGLILGPDGDKMSKSKGNVIDPLDIVN----- 595

Query: 299 GRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
              + A  +R   + M  Y +   +    +   +  + +    +                
Sbjct: 596 --EYGADTLRTYVLFMGDYGDATPWNDSSVKGCKRFIERVAALTDLVSDEPVPAKLESSI 653

Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARES 375
                   A +  +    NT  AI AL  L  E 
Sbjct: 654 HKTIKKVSADIEEM--KFNT--AIAALMTLINEI 683


>gi|255068071|ref|ZP_05319926.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
 gi|255047669|gb|EET43133.1| leucine--tRNA ligase [Neisseria sicca ATCC 29256]
          Length = 878

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 46/156 (29%), Gaps = 24/156 (15%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 24  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 74

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L   A   + 
Sbjct: 75  -----VMQPMGWD---AFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGF-AIDWER 125

Query: 124 RATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
                 P+     Q     +   G  Y  N  + +D
Sbjct: 126 EVATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 161



 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKW----PQTSTSKGIIDP--------------------AVLSALYND------LNTVSA 364
            +      +     G +                      A  + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 774


>gi|229017502|ref|ZP_04174403.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273]
 gi|229023717|ref|ZP_04180208.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228737578|gb|EEL88083.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1272]
 gi|228743826|gb|EEL93927.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1273]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|225621162|ref|YP_002722420.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
 gi|254782486|sp|C0QWR3|SYL_BRAHW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|225215982|gb|ACN84716.1| leucyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
          Length = 853

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 18/153 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+     + D + R  +    +  + +     D      E A  EH + P    +  I
Sbjct: 47  HMGHVSNYTIADSIARYYKLLGYD--ILHPMGW-DAFGMPAENAAIEHKTHPAEWTLKNI 103

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY----LIQNIILHGHAYEANNEI-IF 154
            +      +KD   L   +       T  +P         I  +   G  Y    ++   
Sbjct: 104 AN------MKDQLNLLGYSYDWDREVTTCLPDYYKWGQWFILKMYEKGLLYRKGGDVNWC 157

Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
           D  +       +  ++  +    R   +  KK 
Sbjct: 158 DHCNT----VLANEQVTPEGTCWRCDGEVTKKK 186


>gi|224532370|ref|ZP_03673000.1| lysine--tRNA ligase [Borrelia burgdorferi WI91-23]
 gi|224512677|gb|EEF83048.1| lysine--tRNA ligase [Borrelia burgdorferi WI91-23]
          Length = 470

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|193216846|ref|YP_002000088.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
 gi|193002169|gb|ACF07384.1| isoleucyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
          Length = 889

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               +  H   L+ +G KMSKS GN I   ++          + A ++RL +  + Y   
Sbjct: 573 PFKALLSHGFLLDGKGNKMSKSKGNVIDPLDITN-------KYGADILRLWVANSEYTND 625

Query: 320 IDFTVQRLTEAEILLSKWPQT 340
           I    + L +   +  K+  T
Sbjct: 626 ISIDDKILQQNIEIYRKFRNT 646


>gi|218249445|ref|YP_002375159.1| lysyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226321357|ref|ZP_03796884.1| lysyl-tRNA synthetase [Borrelia burgdorferi Bol26]
 gi|218164633|gb|ACK74694.1| lysyl-tRNA synthetase [Borrelia burgdorferi ZS7]
 gi|226233153|gb|EEH31905.1| lysyl-tRNA synthetase [Borrelia burgdorferi Bol26]
          Length = 521

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|167751097|ref|ZP_02423224.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702]
 gi|167656015|gb|EDS00145.1| hypothetical protein EUBSIR_02082 [Eubacterium siraeum DSM 15702]
          Length = 605

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 35/99 (35%), Gaps = 14/99 (14%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYRE 318
                   +G++N  G KMSKS GN +    L E        +    +R  +L    Y  
Sbjct: 242 PLPKHLYGHGWINFNGDKMSKSKGNVVDPFVLCER-------YGVDAVRYQILRDMPYGS 294

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
             +FT + +      L++      +      +   A+ +
Sbjct: 295 DCNFTNELM------LTRINADLANDLGNLVSRTVAMAD 327


>gi|74193383|dbj|BAE20651.1| unnamed protein product [Mus musculus]
          Length = 626

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 20/153 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + D + R  +             + +           E+ +I  N      
Sbjct: 97  HMGHVRVYTLSDTIARFQKMRG--------MQVINPMGWDAFGLPAENAAIERNLHPESW 148

Query: 100 TSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-I 153
           T  N +   K   RL  C +   +   T  +P      Q     +   G AY+    +  
Sbjct: 149 TQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNW 206

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                       +  +++E     R   K  KK
Sbjct: 207 DPVDQT----VLANEQVNEYGCSWRSGAKVEKK 235


>gi|70607261|ref|YP_256131.1| glutamyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
 gi|76363435|sp|Q4J8P2|SYE_SULAC RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|68567909|gb|AAY80838.1| glutamyl- and glutaminyl-tRNA synthetases [Sulfolobus
           acidocaldarius DSM 639]
          Length = 567

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 27/128 (21%)

Query: 19  QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
             +    +  +   P      H+GNAR  I+     R+           ++    D D K
Sbjct: 94  IPVSGVLVTRFA--PNPDGPLHLGNARAAIISHEYARI-------YNGKFILRFDDTDPK 144

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
             +         PI +A   I         +D   L       + RA+  +       + 
Sbjct: 145 TKK---------PIPEAYDWI--------KEDLKWLGIKW-DLEVRASARLETYYNFARI 186

Query: 139 IILHGHAY 146
           ++  G+AY
Sbjct: 187 LLSKGYAY 194


>gi|332992538|gb|AEF02593.1| methionyl-tRNA synthetase [Alteromonas sp. SN2]
          Length = 675

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 55/181 (30%), Gaps = 46/181 (25%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H  G D+ + H     A    A   + T  NI   +GF+ + G KMSKS G FI     L
Sbjct: 289 HFIGKDITYFHCLFWPAMLEGAGYRKPTGVNI---HGFVTVNGAKMSKSRGTFIKGRTYL 345

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYRE--------PIDFTV--------------QRLTEA 330
           +             +R         +         ++FT                  +  
Sbjct: 346 D-------HLNPEYLRYYFAS----KLGDSVTDIDLNFTDFAQKVNSDLVGKVVNIASRC 394

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK------LARESTKNHDLLPI 384
              ++K      S  +++P +++      N    I  L +        RE     D    
Sbjct: 395 ASFITKRFDGKLSDNVLEPELIAEFQ---NAADTIADLFERRRYHQAIREIMTLADKANQ 451

Query: 385 F 385
           F
Sbjct: 452 F 452


>gi|332311994|gb|EGJ25089.1| Valyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 891

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 494 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 551

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 552 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 594


>gi|323343130|ref|ZP_08083361.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463194|gb|EFY08389.1| leucine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 800

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 54/174 (31%), Gaps = 30/174 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    ++ H G  L     KMSKS 
Sbjct: 522 PVDLYMGGSEHAVLHLLYARFWHKVLFDLGVVDTKEPFGKLY-HQGMILGANNEKMSKSR 580

Query: 283 GNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN +  ++++E+         A  +R   M M      I ++ + L      L +  +  
Sbjct: 581 GNVVNPDDIVESHG-------ADALRVYEMFMGPLDGAIAWSTRGLDGIRKWLDRVYRLM 633

Query: 342 TSKGIIDPAVLSALY-----------NDLNTVS---AIQALHKLARESTKNHDL 381
                I      +L            +D+ T     AI  L     E+ K   L
Sbjct: 634 VESDKISETNDGSLDFVYNQTVQKVTHDIETFGMNTAISQLMIFVNEAYKAETL 687


>gi|257092590|ref|YP_003166231.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257045114|gb|ACV34302.1| methionyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 701

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 8/77 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A+   A      + ++ H GFL ++G KMSKS G FIT      
Sbjct: 294 HFIGKDILYFHALFWPAELEHAGYRTP-SKVFAH-GFLTVDGAKMSKSRGTFIT------ 345

Query: 294 TKKFGGRSWPAPVIRLA 310
            + +  +      +R  
Sbjct: 346 AESYLAQGLDPEWLRYY 362


>gi|229133026|ref|ZP_04261867.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
 gi|228650444|gb|EEL06438.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|225548982|ref|ZP_03769959.1| lysyl-tRNA synthetase [Borrelia burgdorferi 94a]
 gi|225370585|gb|EEH00022.1| lysyl-tRNA synthetase [Borrelia burgdorferi 94a]
          Length = 521

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|221217918|ref|ZP_03589385.1| lysyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|224533374|ref|ZP_03673968.1| lysyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225550021|ref|ZP_03770982.1| lysyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|221192224|gb|EEE18444.1| lysyl-tRNA synthetase [Borrelia burgdorferi 72a]
 gi|224513539|gb|EEF83896.1| lysyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
 gi|225369480|gb|EEG98932.1| lysyl-tRNA synthetase [Borrelia burgdorferi 118a]
 gi|312148132|gb|ADQ30791.1| lysyl-tRNA synthetase [Borrelia burgdorferi JD1]
          Length = 521

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|159468872|ref|XP_001692598.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158278311|gb|EDP04076.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 962

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D++F      I              +++H    + +GRKMSKS GN I   + +   
Sbjct: 572 TGHDILFFWVARMIMMGIEFTGKAPFNTVYLHGLVRDEKGRKMSKSLGNVIDPLDTIG-- 629

Query: 296 KFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQT 340
                 +    +R  +   T   + ++ + +R+T A    +K    
Sbjct: 630 -----QYGTDALRFTLATGTAVGQDLNLSSERVTAARNFTNKLWNA 670


>gi|116872981|ref|YP_849762.1| valyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741859|emb|CAK20983.1| valyl-tRNA synthetase, putative [Listeria welshimeri serovar 6b
           str. SLCC5334]
          Length = 882

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 485 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 542

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 543 -----KYGADSLRYTLATGS--SPGQDLKFSFEKVESTWNFINKIWNASR 585


>gi|315041789|ref|XP_003170271.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
 gi|311345305|gb|EFR04508.1| isoleucyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
          Length = 1012

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 44/221 (19%), Positives = 69/221 (31%), Gaps = 46/221 (20%)

Query: 232 DIHGG---GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D H G      L +  H  ++AQ   +        +  H   L+  GRKMSKS GN I  
Sbjct: 586 DQHRGWFQSSLLTYISH--QLAQGGKSSFKAPFKTLITHGFTLDQHGRKMSKSIGNTIQP 643

Query: 289 NELLETKKFGGRSWP--------------------APVIRLAMLMTHYREPIDFTVQRLT 328
           +E++                                  +RL    + Y + +    Q L 
Sbjct: 644 HEIMGGTLLPPLKPKKVKGKGPKPKLDVPVYDALGPDALRLWAAGSDYTKDVVIGQQVLK 703

Query: 329 EAEILLSKWP----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
              I L K+           Q    K  +    L A         A+  LH L + S + 
Sbjct: 704 AVNISLHKFRVTFKLLLGALQDFDPKNEVPYESLHATDK-----IALVQLHNLVKTSQEA 758

Query: 379 HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
            D +  F A   +       +  N   S    + +++RL  
Sbjct: 759 VDKMEFFKAVTAM------NKWANLEFSAFYIEAIKDRLYA 793


>gi|282601228|ref|ZP_05981133.2| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282569765|gb|EFB75300.1| leucine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 853

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 39/122 (31%), Gaps = 15/122 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R     D++ R  R       V Y              A + H +        I+
Sbjct: 54  HVGHPRSYTALDIVARKKRQCGYN--VLYPMGWDAFGLPTENYALKNHIN------PEIV 105

Query: 100 TSKNTQQFVKDTTRLACLAP-THQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIF 154
           T+KN  +F      L        +   T+  P+     Q     +   G AY+    + +
Sbjct: 106 TAKNVARFKSQLQALGLSFDWDREINTTD--PEYYKWTQWIFLQLYKKGLAYKKETTVNY 163

Query: 155 DT 156
            T
Sbjct: 164 CT 165


>gi|218885953|ref|YP_002435274.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|226701474|sp|B8DNX4|SYR_DESVM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|218756907|gb|ACL07806.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 551

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   + D L R+LR+   +    Y  N      +++  +         
Sbjct: 127 PT--GPLHIGHGRGAALGDCLARVLRFAGYDVTTEYYINDAGRQMRLLGLSVWLRALELS 184

Query: 93  NDAISIITSKNTQQFVKDTTR 113
               ++        ++KD   
Sbjct: 185 GRPFTLPEDFYRGDYIKDIAA 205


>gi|195941479|ref|ZP_03086861.1| lysyl-tRNA synthetase [Borrelia burgdorferi 80a]
 gi|216264358|ref|ZP_03436350.1| lysyl-tRNA synthetase [Borrelia burgdorferi 156a]
 gi|215980831|gb|EEC21638.1| lysyl-tRNA synthetase [Borrelia burgdorferi 156a]
          Length = 521

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|188583889|ref|YP_001927334.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179347387|gb|ACB82799.1| methionyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 522

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 38/130 (29%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    E   T     T  D+  ++    +  +     
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGREVLFT-----TGTDEHGLK---IQQTAAKAGV 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                      +F     RL C A     R T   H      L + +  +G  Y A    
Sbjct: 72  TPRAFVDDMAGRFKAVADRLDC-AYDRFIRTTEPDHYAAAQELWRRMEANGDIYLAKYAG 130

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 131 WYSVRDEAYY 140


>gi|15595004|ref|NP_212793.1| lysyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|226320504|ref|ZP_03796070.1| lysyl-tRNA synthetase [Borrelia burgdorferi 29805]
 gi|6226184|sp|O51603|SYK_BORBU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
          ligase; Short=LysRS
 gi|2688588|gb|AAC67006.1| lysyl-tRNA synthetase [Borrelia burgdorferi B31]
 gi|226234146|gb|EEH32861.1| lysyl-tRNA synthetase [Borrelia burgdorferi 29805]
          Length = 521

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|318041393|ref|ZP_07973349.1| methionyl-tRNA synthetase [Synechococcus sp. CB0101]
          Length = 522

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D++  H     A    A  +E  A ++ H GFL  EG+KM KS GN +   ELL
Sbjct: 255 VHVIGKDILRFHAVYWPAMLLSA-GLELPAKVFGH-GFLTREGQKMGKSLGNVLDPAELL 312

Query: 293 ETKKFGGRSWPAPVIRLAML 312
           E             +R  +L
Sbjct: 313 ERCGR-------DAVRWYLL 325


>gi|282901331|ref|ZP_06309257.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193826|gb|EFA68797.1| Isoleucyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
           CS-505]
          Length = 963

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 2/99 (2%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A     L    D++  G D      ++ +  S   + I     +  H   L+ +GRKMS
Sbjct: 556 VANQRQELTYPVDMYLEGSDQHRGWFQSSLLTSVAVNGIAPYKTVLTHGFVLDEQGRKMS 615

Query: 280 KSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMTHY 316
           KS GN +    ++   K   +  ++ A V+RL +    Y
Sbjct: 616 KSIGNVVDPQIIINGGKDQKKDPAYGADVLRLWVSSVDY 654


>gi|223889426|ref|ZP_03624012.1| lysyl-tRNA synthetase [Borrelia burgdorferi 64b]
 gi|223885112|gb|EEF56216.1| lysyl-tRNA synthetase [Borrelia burgdorferi 64b]
          Length = 521

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R LR    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALRDSGSKVRFIYSWDNYDV 72


>gi|148878499|sp|Q4A8Y0|SYI_MYCH7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144575246|gb|AAZ53409.2| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 886

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDI+  G D       + +  S           +  H   ++ +G KMSKS GN +  
Sbjct: 539 PPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDP 598

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +L         +   + RL +  + Y   I ++     +   +  K   T  
Sbjct: 599 LVILS-------KYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVR 645


>gi|72080374|ref|YP_287432.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 887

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDI+  G D       + +  S           +  H   ++ +G KMSKS GN +  
Sbjct: 540 PPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDP 599

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +L         +   + RL +  + Y   I ++     +   +  K   T  
Sbjct: 600 LVILS-------KYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVR 646


>gi|312600998|gb|ADQ90253.1| Isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 886

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDI+  G D       + +  S           +  H   ++ +G KMSKS GN +  
Sbjct: 539 PPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDP 598

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +L         +   + RL +  + Y   I ++     +   +  K   T  
Sbjct: 599 LVILS-------KYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVR 645


>gi|229029917|ref|ZP_04185986.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271]
 gi|228731425|gb|EEL82338.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus AH1271]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|188524541|ref|ZP_03004531.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198273657|ref|ZP_03206192.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
 gi|195659580|gb|EDX52960.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str. ATCC
           33696]
 gi|198249685|gb|EDY74466.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str. ATCC
           27816]
          Length = 806

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++ +         +  +R+  M M      + ++   L      L +  +  
Sbjct: 586 GNVINPDDIIASHG-------SDTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIID 348
            +   ++
Sbjct: 639 HNLSELE 645


>gi|254302086|ref|ZP_04969444.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148322278|gb|EDK87528.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 859

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQIKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPA--------------------------VLSALYND--LN 360
           A   L++ W     +  ++  A                          V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSELVKNANDEIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVSSSMNSEQAAKILG 748


>gi|46907782|ref|YP_014171.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47093088|ref|ZP_00230865.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|226224153|ref|YP_002758260.1| valyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254824389|ref|ZP_05229390.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254852176|ref|ZP_05241524.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|254931492|ref|ZP_05264851.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|255521286|ref|ZP_05388523.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764782|ref|ZP_07074772.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|81403272|sp|Q71ZB6|SYV_LISMF RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|46881051|gb|AAT04348.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|47018528|gb|EAL09284.1| valyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
 gi|225876615|emb|CAS05324.1| valyl-tRNA synthetase [Listeria monocytogenes serotype 4b str. CLIP
           80459]
 gi|258605480|gb|EEW18088.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293583044|gb|EFF95076.1| valyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293593624|gb|EFG01385.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514458|gb|EFK41515.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|328465587|gb|EGF36816.1| valyl-tRNA synthetase [Listeria monocytogenes 1816]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|330838376|ref|YP_004412956.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
 gi|329746140|gb|AEB99496.1| Methionyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
          Length = 655

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 11/82 (13%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G +++  H    I   C    ++     +   +G+L ++G KMSKS GN +   +
Sbjct: 253 DVHLVGKEIVRFH---SIIWPCILMALDLPLPKMVYGHGWLIVDGDKMSKSKGNVVDPVQ 309

Query: 291 LLETKKFGGRSWPAPVIRLAML 312
           L++        + A  IR  +L
Sbjct: 310 LID-------EFGADAIRYFLL 324


>gi|262374949|ref|ZP_06068183.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262309962|gb|EEY91091.1| leucyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 873

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 46/133 (34%), Gaps = 38/133 (28%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 632 GQEKMSKSKNNGIDPQSIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 684

Query: 333 LLSK-------WPQTSTSKGIIDPAVL--SALY-------------ND------LNTVSA 364
            L +       + + + +   ID   L  +A               +D       NT  A
Sbjct: 685 FLKRVWRLATGFLEKANTAASIDKTALSTAAQDLRRKTHETIQKVGDDIERRHAFNT--A 742

Query: 365 IQALHKLARESTK 377
           I AL +L   + K
Sbjct: 743 IAALMELLNANNK 755


>gi|258424172|ref|ZP_05687054.1| leucyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845793|gb|EEV69825.1| leucyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 805

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 63/171 (36%), Gaps = 20/171 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG++    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDLYIGGVEHAVLHLLYARFWHKVLYDLGIVPTKEPFQKLFNQGMILGEGNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK-WPQTS 341
           N I  +E++++         A  +RL  M M      I ++ + L  +   L + W    
Sbjct: 584 NVINPDEIVQSHG-------ADTLRLYEMFMGPLDAAIAWSEKGLDGSRRFLDRVWRLMV 636

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
              G +   ++++    L+     +  ++  ++ T++ + L    A + ++
Sbjct: 637 NEDGTLSSKIVTSNNKSLD-----KVYNQTVKKVTEDFETLGFNTAISQLM 682


>gi|238810052|dbj|BAH69842.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 794

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 9/92 (9%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYR 317
           E   N+ +  G +  +G KMSKS GN ++ +E++       + + A  +RL +L      
Sbjct: 540 EPFDNL-LTQGMILKDGLKMSKSKGNVVSPDEMI-------KKYDADTMRLFVLFAAPPE 591

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
           + +++    +      + +           D 
Sbjct: 592 KELEWISSGIEGCHKFIKRLIARRKEVKAKDK 623


>gi|238506599|ref|XP_002384501.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
 gi|220689214|gb|EED45565.1| isoleucyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
          Length = 1006

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 85/280 (30%), Gaps = 72/280 (25%)

Query: 194 WKRSTPMEPGW-ESPW----GRG-RPG------WHIECSAMSS----HYLGKVFDIHGGG 237
           W      +P W  +      G G R G      W    ++ +     +  G   D++  G
Sbjct: 524 WWTDDANDPAWIPASLQEASGPGYRRGTDTMDVWFDSGTSWAEIDEPYRDGYPADVYSEG 583

Query: 238 LD----------LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
            D          L F  H+    Q+          N+  H   L+ EGRKMSKS GN + 
Sbjct: 584 TDQHRGWFQSGLLTFTAHQLAAGQTATRA---PFRNLITHGFTLDEEGRKMSKSIGNVLL 640

Query: 288 INELL------------------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
              ++                  E +     +     +R+ +  + Y   +    Q L  
Sbjct: 641 PQTIMDGTLLPPLKPRKGKKKQTENQGPVYDALGPDALRMWVASSDYTRDVVIGKQVLQT 700

Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTV---------SAIQALHKLARESTK 377
               L K+  T          +L AL +   D              A++ L ++     K
Sbjct: 701 VNTSLHKYRVTFKL-------LLGALSDFRLDNQVPYNQLQQADRIALKHLSEMILSCQK 753

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             +    + A      +       N   S    + +++RL
Sbjct: 754 ACENFEFYKA------VNALNRWANLEFSAFYMEAIKDRL 787


>gi|185178964|ref|ZP_02964721.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188024264|ref|ZP_02996960.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188518576|ref|ZP_03004032.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|225551627|ref|ZP_03772573.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
 gi|184209243|gb|EDU06286.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str. ATCC
           27817]
 gi|188018928|gb|EDU56968.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str. ATCC
           27819]
 gi|188997837|gb|EDU66934.1| leucyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str. ATCC
           33695]
 gi|225379442|gb|EEH01807.1| leucine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
           27618]
          Length = 806

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 42/127 (33%), Gaps = 16/127 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H                    E    + I+ G  L     KMSKS 
Sbjct: 527 PVDVYIGGQEHAVLHLLYARFWHRFLYDIGVVPTKEPFYKV-INQGMILGENNEKMSKSK 585

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++++ +         +  +R+  M M      + ++   L      L +  +  
Sbjct: 586 GNVINPDDIIASHG-------SDTLRIYEMFMGPLTASLPWSPDGLDAMRKWLDRVYRLY 638

Query: 342 TSKGIID 348
            +   ++
Sbjct: 639 HNLSELE 645


>gi|171779006|ref|ZP_02920014.1| hypothetical protein STRINF_00889 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282364|gb|EDT47789.1| hypothetical protein STRINF_00889 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 485

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 78/456 (17%), Positives = 146/456 (32%), Gaps = 86/456 (18%)

Query: 23  PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---- 77
           P  IR+ Y   PT     HIGNAR  +     Y   R++ G+    +V  I D D     
Sbjct: 2   PKKIRVRYAPSPT--GLLHIGNARTALF---NYLYARHHGGD----FVIRIEDTDRKRHV 52

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           +  ER++ E+      D       +  +++ +                +  +      I 
Sbjct: 53  EDGERSQLENLKWLGMDWDESP--QTHEKYRQ----------------SERLDIYQKYID 94

Query: 138 NIILHGHA---YEANNEIIFDTSSIPNYGSFSR-----RKIDEQKMGTRVPEKYHKKNPA 189
            ++  G A   Y    E+  +       G   R       + E++    + E+  K    
Sbjct: 95  QLLAEGKAYKSYVTEEELAAERERQEAAGETPRYINEFLGMSEEEKAAYIAEREAKGIIP 154

Query: 190 DFIL---------WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-LGKVFDIHGGGLD 239
              L         W      +  +E   G     W I+       Y    V D H   + 
Sbjct: 155 TVRLAVNESGIYKWHDIVKGDIEFEG--GNVGGDWVIQKKDGYPTYNFAVVIDDHLMEIS 212

Query: 240 LIFP---HHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLET 294
            +     H  N   Q    + +   A  + H   +  +  G+K+SK + N      L   
Sbjct: 213 HVIRGDDHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNT-----LQFI 267

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           + +  + +    +   + +  +    +   F+ + L    I L    + S S    D   
Sbjct: 268 EDYRKKGYMPEAVFNFIALLGWNPGGEDEIFSREEL----IKLFDEHRLSKSPAAFDQKK 323

Query: 352 LSALYN------DLNTVSAIQA--LHKLARESTKNHDLLPI----FNASAHILGI-EVCK 398
           +  + N      D +TV A+    L +  R + K   L+ +      +   I+ + ++  
Sbjct: 324 MDWMSNEYIKNADFDTVFAMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFF 383

Query: 399 EHLNKNISIAIEKLVQE----RLILLKMKKFSSADY 430
           E   +      E +  E     L   K K  + +D 
Sbjct: 384 EDFPELTDAEKEFMAGETVPTVLEAFKAKLEAMSDE 419


>gi|168705003|ref|ZP_02737280.1| arginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 580

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/31 (38%), Positives = 17/31 (54%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
           GP V    H+G+ R  I+ D L R+LR+   
Sbjct: 126 GPNVAKPLHVGHLRSTIIGDALVRILRFLGH 156


>gi|196031983|ref|ZP_03099397.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|228927652|ref|ZP_04090703.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229122131|ref|ZP_04251346.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|195994734|gb|EDX58688.1| lysyl-tRNA synthetase [Bacillus cereus W]
 gi|228661257|gb|EEL16882.1| Lysyl-tRNA synthetase [Bacillus cereus 95/8201]
 gi|228831996|gb|EEM77582.1| Lysyl-tRNA synthetase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 517

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACL 117
             R +  +ID   ++     +  IP              ++F K        
Sbjct: 69  RFRKVPKNIDPSFVKYIGMSYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|70982524|ref|XP_746790.1| isoleucyl-tRNA synthetase [Aspergillus fumigatus Af293]
 gi|66844414|gb|EAL84752.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
 gi|159122969|gb|EDP48089.1| isoleucyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
          Length = 1009

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 39/110 (35%), Gaps = 17/110 (15%)

Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET------------- 294
           ++A    A       N+  H   L+ EGRKMSKS GN I    +++              
Sbjct: 602 QLASGQTATPRAPFKNLVTHGFTLDEEGRKMSKSIGNVIHPQSIMDGTLLPPLKPRKGKG 661

Query: 295 ----KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               K+    +     +R+ +  + Y   +    Q L      L K+  T
Sbjct: 662 KQQNKELVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKFRVT 711


>gi|325958696|ref|YP_004290162.1| Valyl-tRNA synthetase [Methanobacterium sp. AL-21]
 gi|325330128|gb|ADZ09190.1| Valyl-tRNA synthetase [Methanobacterium sp. AL-21]
          Length = 887

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 32/90 (35%), Gaps = 7/90 (7%)

Query: 33  PTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI----TDID-DKIIERARQ 85
           P  Y     HIG+       D++ R +R    +       +     T++  ++I E  + 
Sbjct: 44  PPPYPTGSIHIGHVLNWTFIDIIARYMRMNGYDVMFPQGWDCHGLPTEVKVEEIHEIKKN 103

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           + P     D    +T  N +Q  +    L 
Sbjct: 104 DIPRDEFRDMCIDLTKTNIKQMKEQMQGLG 133


>gi|311272846|ref|XP_003133611.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Sus
           scrofa]
          Length = 593

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 326 GAGMSPPHRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLDR-------YTVDGFRYFLL 375


>gi|297820298|ref|XP_002878032.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323870|gb|EFH54291.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 615

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 25/142 (17%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPI 320
             +GFL  +G KM KS GN +   EL+       + +    +R   L    R        
Sbjct: 354 FGHGFLTKDGMKMGKSLGNTLEPFELV-------QKFGPDAVRYFFL----REVEFGNDG 402

Query: 321 DFTVQR---LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-----LHKLA 372
           D++  R   +  A +  +     + + G++     S L  D +TV+A        + KL 
Sbjct: 403 DYSEDRFIKIVNAHLANTIGNLLNRTLGLLKKNCESTLVED-STVAAEGVPLKDTVEKLV 461

Query: 373 RESTKNHDLLPIFNASAHILGI 394
            ++  N++ L + +A   +L I
Sbjct: 462 EKAQTNYENLSLSSACEAVLEI 483


>gi|302415725|ref|XP_003005694.1| superkiller protein [Verticillium albo-atrum VaMs.102]
 gi|261355110|gb|EEY17538.1| superkiller protein [Verticillium albo-atrum VaMs.102]
          Length = 1415

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 55/148 (37%), Gaps = 11/148 (7%)

Query: 247  NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
            NE A +         A+ W+  GF+ L   +  ++ G F    ++ E+     R   +  
Sbjct: 1002 NE-AFTRAQSTDPDYAHAWLGQGFVALLLGEPKEARGLFTHAMDIAESSSALTRRQYSVA 1060

Query: 307  IRLAMLMTHYREPIDFTVQRLTE---AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
            I   +L T    P++FT+  L +   A   L++      + G +         +  N   
Sbjct: 1061 IFDHILTT----PLNFTISSLIQPVFALSQLNRLKPQDLAYGHLSSLFRERTRD--NAP- 1113

Query: 364  AIQALHKLARESTKNHDLLPIFNASAHI 391
            A+  L K+      +++L     + A  
Sbjct: 1114 AVAVLEKICGVLETDYELTESAQSLARF 1141


>gi|255318346|ref|ZP_05359581.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262379088|ref|ZP_06072244.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
 gi|255304658|gb|EET83840.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
 gi|262298545|gb|EEY86458.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
          Length = 686

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     LE
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYLE 346

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 347 -------HLNPEYLRYYFAS 359


>gi|221211555|ref|ZP_03584534.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
 gi|221168916|gb|EEE01384.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
          Length = 722

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376



 Score = 36.4 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 8/78 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V Y+         ++ RA +E            
Sbjct: 33  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYIGADDTHGTPVMLRAEKEGL------TPKQ 84

Query: 99  ITSKNTQQFVKDTTRLAC 116
           +  +   +  +D      
Sbjct: 85  LIERVWAEHKRDFDSFGV 102


>gi|149926203|ref|ZP_01914465.1| methionyl-tRNA synthetase [Limnobacter sp. MED105]
 gi|149825021|gb|EDM84233.1| methionyl-tRNA synthetase [Limnobacter sp. MED105]
          Length = 691

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 39/96 (40%), Gaps = 13/96 (13%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D+++ H     A    A  +     +  H GFL ++G KMSKS G FIT     
Sbjct: 293 IHFIGKDILYFHALFWPAMLQFA-GLRTPTKVNAH-GFLTVDGAKMSKSRGTFIT----- 345

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
             + F  +      +R           ++ T++ L 
Sbjct: 346 -AESFIQQGLNPEWLRYYFAAK-----LNSTMEDLD 375


>gi|121534360|ref|ZP_01666184.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
 gi|121307130|gb|EAX48048.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
          Length = 640

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 39/127 (30%), Gaps = 13/127 (10%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+A    + D + R  R    +  V ++    +   KI  +A++           
Sbjct: 17  DRLHIGHAYCTTIADAIARYKRLAGYD--VFFLTGSDEHGQKIERKAKEH------GVTP 68

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEA--NNEI 152
                K    F     +L         R T   H   +  + Q I   G  Y+A    + 
Sbjct: 69  IEYVDKIVASFKHLWEKLNISNDDF-IRTTETRHKEVVQSIFQKIYDQGDIYKATYEGQY 127

Query: 153 IFDTSSI 159
                + 
Sbjct: 128 CTPCETF 134



 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 18/66 (27%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI------D 321
           +G+L +EG KMSKS GN I    L++        + A  IR  +L     + I      +
Sbjct: 287 HGWLVVEGDKMSKSKGNVIDPLALID-------EFGADAIRYFLL-----KEITLGLDGN 334

Query: 322 FTVQRL 327
           F+ + L
Sbjct: 335 FSREAL 340


>gi|57234814|ref|YP_181133.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
 gi|123773627|sp|Q3Z9G6|SYM_DEHE1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|57225262|gb|AAW40319.1| methionyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
          Length = 553

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 10/109 (9%)

Query: 40  HIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           H+G+ A   +  D+  R  R    E  V  V         I  RA QE          + 
Sbjct: 19  HLGHVAGAYLPADIFARYHRTRGDE--VLMVSGSDMHGTPITIRAEQE------GITAAE 70

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
           +  +  + F+    +L      +   AT NH      +  ++   G+ Y
Sbjct: 71  VAERYHRLFMASWPKLGISWDCYTSTATANHARTAQQMFLSLYEKGYIY 119


>gi|54020318|ref|YP_115548.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|81823564|sp|Q602B7|SYI_MYCH2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|53987491|gb|AAV27692.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 886

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDI+  G D       + +  S           +  H   ++ +G KMSKS GN +  
Sbjct: 539 PPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDP 598

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +L         +   + RL +  + Y   I ++     +   +  K   T  
Sbjct: 599 LVILS-------KYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVR 645


>gi|327382286|gb|AEA53762.1| Valyl-tRNA synthetase [Lactobacillus casei LC2W]
 gi|327385481|gb|AEA56955.1| Valyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 880

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 496 IFQGLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 548

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
             ++  +  +P     F+ +++  A   ++K 
Sbjct: 549 WFLITGN--KPGQDTRFSYKQVEAAWNFINKI 578


>gi|289616395|emb|CBI56922.1| unnamed protein product [Sordaria macrospora]
          Length = 621

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 26/119 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  ++ D       +   +  +        +DD    + +QE      
Sbjct: 127 PEPSGYLHIGHAKAALLSD----YFAHQAYKGQLRL-----RLDDTNPSKEKQE------ 171

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
                          ++D   +    P      +++   +  +   +I  GHAY  + +
Sbjct: 172 ----------YQDAIIEDLALMGIK-PDAVTYTSDYFDYLYEMCVRMIKEGHAYADDTD 219


>gi|260906310|ref|ZP_05914632.1| valyl-tRNA synthetase [Brevibacterium linens BL2]
          Length = 881

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 7/57 (12%)

Query: 262 ANIWIHNGF----LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A  W H G     L+ + +KMSKS GN +   ++L   K G   +    +R      
Sbjct: 582 AAPWKHAGLSGWILDPDRKKMSKSKGNVVVPTDILAETKPG---FGPDAVRYWAASA 635


>gi|239631662|ref|ZP_04674693.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526127|gb|EEQ65128.1| valyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 499 IFQGLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 551

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
             ++  +  +P     F+ +++  A   ++K 
Sbjct: 552 WFLITGN--KPGQDTRFSYKQVEAAWNFINKI 581


>gi|229172908|ref|ZP_04300462.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3]
 gi|228610653|gb|EEK67921.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus MM3]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|227535262|ref|ZP_03965311.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|227187146|gb|EEI67213.1| valine--tRNA ligase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
          Length = 880

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 496 IFQGLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 548

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
             ++  +  +P     F+ +++  A   ++K 
Sbjct: 549 WFLITGN--KPGQDTRFSYKQVEAAWNFINKI 578


>gi|261343413|ref|ZP_05971058.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541]
 gi|282568556|gb|EFB74091.1| methionine--tRNA ligase [Providencia rustigianii DSM 4541]
          Length = 675

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FIT    L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGSNYRKPT-NLFVH-GYVTVNGAKMSKSRGTFITARSYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                  +  A  +R  
Sbjct: 349 -------NLDADCLRYY 358


>gi|224499788|ref|ZP_03668137.1| valyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|254831953|ref|ZP_05236608.1| valyl-tRNA synthetase [Listeria monocytogenes 10403S]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|169785575|ref|XP_001827248.1| isoleucyl-tRNA synthetase [Aspergillus oryzae RIB40]
 gi|83775996|dbj|BAE66115.1| unnamed protein product [Aspergillus oryzae]
          Length = 1006

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 49/280 (17%), Positives = 85/280 (30%), Gaps = 72/280 (25%)

Query: 194 WKRSTPMEPGW-ESPW----GRG-RPG------WHIECSAMSS----HYLGKVFDIHGGG 237
           W      +P W  +      G G R G      W    ++ +     +  G   D++  G
Sbjct: 524 WWTDDANDPAWIPASLQEASGPGYRRGTDTMDVWFDSGTSWAEIDEPYRDGYPADVYSEG 583

Query: 238 LD----------LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
            D          L F  H+    Q+          N+  H   L+ EGRKMSKS GN + 
Sbjct: 584 TDQHRGWFQSGLLTFTAHQLAAGQTATRA---PFRNLITHGFTLDEEGRKMSKSIGNVLL 640

Query: 288 INELL------------------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
              ++                  E +     +     +R+ +  + Y   +    Q L  
Sbjct: 641 PQTIMDGTLLPPLKPRKGKKKQTENQGPVYDALGPDALRMWVASSDYTRDVVIGKQVLQT 700

Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTV---------SAIQALHKLARESTK 377
               L K+  T          +L AL +   D              A++ L ++     K
Sbjct: 701 VNTSLHKYRVTFKL-------LLGALSDFRLDNQVPYNQLQQADRIALKHLSEMILSCQK 753

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             +    + A      +       N   S    + +++RL
Sbjct: 754 ACENFEFYKA------VNALNRWANLEFSAFYMEAIKDRL 787


>gi|16803592|ref|NP_465077.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224501508|ref|ZP_03669815.1| valyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|81508987|sp|Q8Y6X9|SYV_LISMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|16410981|emb|CAC99630.1| valyl-tRNA synthetase [Listeria monocytogenes EGD-e]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|325697075|gb|EGD38962.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK160]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|284801943|ref|YP_003413808.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284995085|ref|YP_003416853.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|284057505|gb|ADB68446.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284060552|gb|ADB71491.1| valyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|254993780|ref|ZP_05275970.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
          Length = 885

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|238916624|ref|YP_002930141.1| leucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
 gi|238871984|gb|ACR71694.1| leucyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
          Length = 816

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 44/134 (32%), Gaps = 21/134 (15%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYR 317
           E       H   L   G KMSKS GN +  ++++       R + A  +R   M +  + 
Sbjct: 579 EPYQKRTSHGMILGENGEKMSKSRGNVVNPDDIV-------RDYGADTLRTYEMFIGAFD 631

Query: 318 EPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL----------YNDLNTVSA 364
               ++   +      L +        T +        + +          Y +L   +A
Sbjct: 632 AAASWSEDGVKGCRRFLDRVWKLQDIMTDEEGFSKEFETKMHQTIKKVSFDYENLKYNTA 691

Query: 365 IQALHKLARESTKN 378
           I  L  +  + +K 
Sbjct: 692 IAQLMTMLNDFSKA 705


>gi|221199339|ref|ZP_03572383.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
 gi|221205759|ref|ZP_03578774.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221174597|gb|EEE07029.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
 gi|221180624|gb|EEE13027.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
          Length = 719

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 299 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 356

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 357 T------GLNPEWLRYYF 368



 Score = 36.4 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 8/78 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V Y+         ++ RA +E            
Sbjct: 25  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYIGADDTHGTPVMLRAEKEGL------TPKQ 76

Query: 99  ITSKNTQQFVKDTTRLAC 116
           +  +   +  +D      
Sbjct: 77  LIERVWAEHKRDFDSFGV 94


>gi|196043220|ref|ZP_03110458.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
 gi|196025529|gb|EDX64198.1| lysyl-tRNA synthetase [Bacillus cereus 03BB108]
          Length = 517

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACL 117
             R +  +ID   ++     +  IP              ++F K        
Sbjct: 69  RFRKVPKNIDPSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|163752281|ref|ZP_02159480.1| methionyl-tRNA synthetase [Shewanella benthica KT99]
 gi|161327824|gb|EDP99005.1| methionyl-tRNA synthetase [Shewanella benthica KT99]
          Length = 694

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A    A   + T N++ H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIINFHCLFWPAMLEGAGYRKPT-NVYAH-GYVTVNGAKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                  +     +R  
Sbjct: 349 -------NLDPEYLRYY 358


>gi|254828213|ref|ZP_05232900.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258600602|gb|EEW13927.1| valyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|194366698|ref|YP_002029308.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
 gi|226710935|sp|B4SRG1|SYM_STRM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|194349502|gb|ACF52625.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
          Length = 693

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDA------GLEPEALRYYF 358


>gi|78043915|ref|YP_358996.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|109894979|sp|Q3AFT8|SYR_CARHZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|77996030|gb|ABB14929.1| arginyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 557

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 87/445 (19%), Positives = 151/445 (33%), Gaps = 90/445 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIER----- 82
           PT     H+GN R   + D+L  +L     E    Y  N     I + +  +  R     
Sbjct: 134 PT--GLLHMGNGRGAALGDILANILTEAGYEVSREYYINDAGNQIENFNKSVEARYLELL 191

Query: 83  -ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHI--PQMIYLIQN 138
             + E P    +    I T++N      D        P  + + A   I   + +  I+ 
Sbjct: 192 GYKVEFPEEGYHGEDIIDTARNIVARFGDR---FIHLPEKERQEALGKIALEEKLQSIKK 248

Query: 139 IILH-GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
            + + G  Y    ++ F   S+   G        E +   ++  +       D  LW  +
Sbjct: 249 SLENFGVKY----DVWFSERSLHESG--------EVEKTVKLLLERGYLYEKDGALWFAA 296

Query: 198 TPMEPGWESPWGR--GRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSC 253
           + +    +    R  G P ++    A   +   + FD  I+  G D     H + +  + 
Sbjct: 297 SKLGEEKDEVLVRKNGVPTYYAADIAYHKNKFDRGFDLVINIWGADHHG--HVSRMKTAL 354

Query: 254 CADRIEKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
            A   +    I I    + L   G   +MSK  G +IT++EL+E              R 
Sbjct: 355 KALGYDPERLIVILMQLVRLFQGGELVRMSKRTGQYITLDELVEEVGV-------DAARY 407

Query: 310 AMLMTHYREPIDFTVQRLTE------------AEILLSKWPQTSTSKG-------IIDPA 350
             +M  +   +DF +    E            A   +    +    +G        +D A
Sbjct: 408 FFVMRSHDAHLDFDLDLAKEKSNENPVYYIQYAHARIMSLYRQCNEQGVTLPPVEDVDLA 467

Query: 351 VLSALYNDLNTVSAIQAL-------------HKLARESTKNHDLLPIFNASAHILGIEVC 397
           +LS+    LN +  +                H LAR   +       F  S  +LG+E  
Sbjct: 468 ILSSEAE-LNLLRHLAEFPVEIEKCATALAPHHLARYLHELAGYFHTFYNSCRVLGVE-- 524

Query: 398 KEHLNKNISIAIEKLVQE-RLILLK 421
                +N+S A   LV+  R++L K
Sbjct: 525 -----ENLSKARLLLVEATRIVLRK 544


>gi|116494743|ref|YP_806477.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|191638254|ref|YP_001987420.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|301066302|ref|YP_003788325.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
 gi|116104893|gb|ABJ70035.1| valyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|190712556|emb|CAQ66562.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Lactobacillus
           casei BL23]
 gi|300438709|gb|ADK18475.1| Valyl-tRNA synthetase [Lactobacillus casei str. Zhang]
          Length = 880

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/92 (22%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 496 IFQGLHFTGERPFKYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 548

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
             ++  +  +P     F+ +++  A   ++K 
Sbjct: 549 WFLITGN--KPGQDTRFSYKQVEAAWNFINKI 578


>gi|47096717|ref|ZP_00234302.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|254898281|ref|ZP_05258205.1| valyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254912226|ref|ZP_05262238.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254936554|ref|ZP_05268251.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|47014901|gb|EAL05849.1| valyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|258609148|gb|EEW21756.1| valyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293590201|gb|EFF98535.1| valyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|327282139|ref|XP_003225801.1| PREDICTED: probable leucyl-tRNA synthetase, mitochondrial-like
           [Anolis carolinensis]
          Length = 904

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 53/187 (28%), Gaps = 27/187 (14%)

Query: 12  ERKITEFQAI---DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
            R   +FQ I   D S  + YV     Y     H+G+ R   + D + R  +        
Sbjct: 65  SRIKEQFQNIGKIDKSRPKFYVLSMFPYPSGKLHMGHVRVYTISDTVARFQKMRG----- 119

Query: 67  TYVRNITDID--DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
             V N    D      E A  EH   P        T  N Q   K    L       +  
Sbjct: 120 LRVINPMGWDAFGLPAENAAIEHGLHPA-----QWTQSNIQHMRKQLDALGLSFSWDREI 174

Query: 125 ATNHIPQMIYLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRV 179
           AT    +     Q     +   G  Y+    +              +  ++DE     R 
Sbjct: 175 AT-CFSEYYKWTQYIFLKLYEAGLVYQNEAMVNWDPVDQT----VLANEQVDENGCSWRS 229

Query: 180 PEKYHKK 186
             K  KK
Sbjct: 230 GAKVQKK 236


>gi|307191176|gb|EFN74873.1| Isoleucyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
          Length = 934

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 33/90 (36%), Gaps = 3/90 (3%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S           +++H   ++ +  KMSKS GN +   E+ +  +   +  ++    +R 
Sbjct: 583 SIALQGRSPYNALFVHGFAVDDKASKMSKSIGNVVNSEEITKGGENLNKNPAYGVDTLRW 642

Query: 310 AMLMTHY-REPIDFTVQRLTEAEILLSKWP 338
            +         +  T   L E+   + K  
Sbjct: 643 WVASHGCQHSQVPVTTTLLRESHESIQKLR 672


>gi|300118071|ref|ZP_07055819.1| isoleucyl-tRNA synthetase [Bacillus cereus SJ1]
 gi|298724382|gb|EFI65076.1| isoleucyl-tRNA synthetase [Bacillus cereus SJ1]
          Length = 525

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 26  NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 85

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 86  SKGNALDPVDLVG-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 131


>gi|256829388|ref|YP_003158116.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
 gi|256578564|gb|ACU89700.1| arginyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
          Length = 551

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 28/81 (34%), Gaps = 2/81 (2%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+ R   V D L R+LR+   E    Y  N      +++  A         
Sbjct: 127 PT--GPLHIGHGRGAAVGDSLTRILRFTGHEVETEYYLNDAGRQMRLLGLAVWVRYQQAC 184

Query: 93  NDAISIITSKNTQQFVKDTTR 113
              I          ++KD + 
Sbjct: 185 GIEIPFPEDCYRGDYIKDISA 205


>gi|227824451|ref|ZP_03989283.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
 gi|226904950|gb|EEH90868.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
          Length = 644

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 7/46 (15%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           +G+L + G KMSKS GN +             + +    +R  +L 
Sbjct: 289 HGWLVVNGDKMSKSKGNVV-------DPVEPIKEFGPDAVRYFLLS 327


>gi|149179757|ref|ZP_01858262.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148851949|gb|EDL66094.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 549

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 41/111 (36%), Gaps = 11/111 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R     + V YV         I  RA QE   +        I
Sbjct: 26  HVGHLAALLPGDILARYHRLKG--EDVLYVSGSDCNGTPIEIRAHQEGVKV------RDI 77

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHAYEA 148
             +  Q+F+    +L         R  + NH  ++  +   +  +G  YE 
Sbjct: 78  ADRYHQEFLDCFQKLGFSY-DQYGRTDSANHHQEVQKIFLTLKDNGFLYEK 127


>gi|161524036|ref|YP_001579048.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189351203|ref|YP_001946831.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|226710899|sp|A9AHJ8|SYM_BURM1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|160341465|gb|ABX14551.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
 gi|189335225|dbj|BAG44295.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
          Length = 722

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FIT    ++
Sbjct: 307 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGAKMSKSRGTFITAQSYID 364

Query: 294 TKKFGGRSWPAPVIRLAM 311
           T            +R   
Sbjct: 365 T------GLNPEWLRYYF 376



 Score = 36.4 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 8/78 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+    I  D+  R LR +  E  V Y+         ++ RA +E            
Sbjct: 33  IHIGHLVEYIQTDIWVRTLRMHGHE--VYYIGADDTHGTPVMLRAEKEGL------TPKQ 84

Query: 99  ITSKNTQQFVKDTTRLAC 116
           +  +   +  +D      
Sbjct: 85  LIERVWAEHKRDFDSFGV 102


>gi|323493149|ref|ZP_08098280.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
 gi|323312620|gb|EGA65753.1| methionyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
          Length = 686

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAATYLD 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                        +R       Y   ++    R+ + ++ L  + Q   + 
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNAD 384


>gi|301156172|emb|CBW15643.1| methionyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
          Length = 682

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 68/192 (35%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIVYFHSLFWPAMLEGSEFRKPT-NVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 347

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + +  L  + Q              
Sbjct: 348 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLEDFVQRVNTDIVNKLVNLA 392

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L + L   +        A +    ++      A   I+ + +   +
Sbjct: 393 SRNAGFITKRFEGKLADKLEDEALFAEFTVQAEQIAAYYESREYNKAIREIMALTDKANK 452

Query: 400 HLNKNISIAIEK 411
           ++++     I K
Sbjct: 453 YIDEKAPWVIAK 464


>gi|166712769|ref|ZP_02243976.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
          Length = 694

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|17230775|ref|NP_487323.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
 gi|48428560|sp|Q8YS09|SYL_ANASP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|17132378|dbj|BAB74982.1| leucyl-tRNA synthetase [Nostoc sp. PCC 7120]
          Length = 872

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           +  + Y      Y     H+G+ R   + DV+ RL R       V +             
Sbjct: 31  NKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFGLPAEN 88

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A      I      +  T +N  Q  +   RL  L+           P      Q    
Sbjct: 89  AA------IDRGVPPAKWTYQNITQMRQQLQRLG-LSIDWDSEVATCSPDYYKWTQWIFL 141

Query: 138 NIILHGHAYEANNEIIFD 155
             +  G AY+    + +D
Sbjct: 142 QFLQAGLAYQKEAAVNWD 159


>gi|289704778|ref|ZP_06501199.1| methionine--tRNA ligase [Micrococcus luteus SK58]
 gi|289558494|gb|EFD51764.1| methionine--tRNA ligase [Micrococcus luteus SK58]
          Length = 541

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 44/129 (34%), Gaps = 12/129 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     VR +T  D+      + E  +     +   
Sbjct: 21  PHIGHAYEYIASDAMARFQRLDGRD-----VRFLTGTDEH---GQKMEQTAQQQGVSALE 72

Query: 99  ITSKNTQQFVK-DTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           + ++N   F + D   L         R   T+H   +  + + +  +G  Y  +    + 
Sbjct: 73  LATRNAAVFREMDDDVLDISY-DRFIRTTDTDHAEAVREIWRRMEANGDIYLGSYAGWYS 131

Query: 156 TSSIPNYGS 164
                 +G 
Sbjct: 132 VRDERYFGE 140



 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 39/99 (39%), Gaps = 11/99 (11%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E     + Y     D+H  G D+   H     A    A  +E    + IH GFLN 
Sbjct: 257 GWPAEDPEAFARYWPA--DLHVIGKDISRFHCIFWPAFLMSA-GLELPRRVMIH-GFLNN 312

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
            G KMSKS GN +   E +         +    IR  +L
Sbjct: 313 NGAKMSKSLGNVVHPREWVAR-------YGLDAIRFFLL 344


>gi|300361442|ref|ZP_07057619.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354061|gb|EFJ69932.1| valine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 901

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q     +     ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|208435048|ref|YP_002266714.1| valyl-tRNA synthetase [Helicobacter pylori G27]
 gi|208432977|gb|ACI27848.1| valyl-tRNA synthetase [Helicobacter pylori G27]
          Length = 872

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 23/183 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS-ALYNDLNTVS--- 363
                       I  +   L   +   +K     +   +   A       ++  T     
Sbjct: 559 ANLCATG---RDIKLSTTHLENNKNFANKLFNAVSYLKLKQEAFKDREHLDEYQTPLGRY 615

Query: 364 AIQALHKLARESTKNHDLLPIFNASA---HILGIEVCKE--HLNKNISIAIEKLVQERLI 418
           A   L+   +E+    D     +A+      L  E C      +K  + AI++L      
Sbjct: 616 AKSRLNSATKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSKVENEAIDELGSVLKE 675

Query: 419 LLK 421
            LK
Sbjct: 676 ALK 678



 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 20/182 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P V    HIG+A  + + DVL R  R    +       +   I  + +   +  +  I  
Sbjct: 49  PNVTGILHIGHALTLSLQDVLARYKRMDGYKTLYQPGLDHAGIATQNVVEKQLLNQGIKK 108

Query: 93  NDAISI-----ITSKNTQ---QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
            D         +     +     ++   RL   A   + R T     M   +Q  +    
Sbjct: 109 EDLGREEFIKKVWEWKEKSGGAILEQMKRLGVSAAFSRTRFT-----MDKGLQRAVKLAF 163

Query: 145 A--YEAN---NEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRST 198
              YE      +     +     G+ S  +++ E++ G     +Y+ +N  DF++   + 
Sbjct: 164 LKWYEQGLIIQDNYM-VNWCTKDGALSDIEVEYEERKGALYYIRYYLENQKDFLVVATTR 222

Query: 199 PM 200
           P 
Sbjct: 223 PE 224


>gi|254466755|ref|ZP_05080166.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
 gi|206687663|gb|EDZ48145.1| leucyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
          Length = 854

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 36/140 (25%), Gaps = 13/140 (9%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
                 + YV    P      H+G+ R   + DV+ R          V +          
Sbjct: 27  RTGGKPKYYVLEMFPYPSGKLHMGHVRNYTMGDVIARY--KLSTGHNVLHPMGFDAFGMP 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
               A                T  N    V+    L       +  AT    +  Q   L
Sbjct: 85  AENAAMASGGH------PKDWTYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQAL 138

Query: 136 IQNIILHGHAYEANNEIIFD 155
             + +  G  Y  N  + +D
Sbjct: 139 FLDFLEKGLVYRRNAVVNWD 158


>gi|170691609|ref|ZP_02882774.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M]
 gi|170143814|gb|EDT11977.1| arginyl-tRNA synthetase [Burkholderia graminis C4D1M]
          Length = 596

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 48/327 (14%), Positives = 95/327 (29%), Gaps = 66/327 (20%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   + D L  +L     +    +  N   +    +  + Q       
Sbjct: 141 PT--GPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIGTLALSTQARARGLA 198

Query: 93  NDAISIITSKNTQQFVKDTTR--LA---CLAPTHQP----RATNHIPQMIYLIQNIILHG 143
                   S    +++ D  +  L      A   +P    R   ++  +           
Sbjct: 199 PGDAGWPASAYNGEYIADIAKDYLNGVTVSASDGEPVTGARDVENLDAIRRF-------A 251

Query: 144 HAY---EANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTP 199
            AY   E + ++         Y   S    +   +   +      K    +  LW R+T 
Sbjct: 252 VAYLRREQDMDLQAFGVKFDQYYLESSLYTEGRVEKTVQALITAGKTYEREGALWLRTTD 311

Query: 200 MEP-------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
                       +  +    P   +H+   A       KV +I G        HH   IA
Sbjct: 312 DGDDKDRVMRKTDGTYTYFVPDVAYHV---AKWERGFTKVINIQGSD------HH-GTIA 361

Query: 251 QSCCADRI------EKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGR 300
           +     +       +   +  +H   + +   G   K+SK  G+++T+ +L+E       
Sbjct: 362 RVRAGLQGLGIGIPKGYPDYVLHK-MVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGALP 420

Query: 301 SWPA--------------PVIRLAMLM 313
              A                +R  ++ 
Sbjct: 421 GTEAAVDQIDEETIRRGRDAVRFFLIS 447


>gi|116784100|gb|ABK23214.1| unknown [Picea sitchensis]
          Length = 336

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 7/52 (13%), Positives = 26/52 (50%)

Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
           ++      + ++ I++++   +R      + + +AD ++K +  +G+ + D 
Sbjct: 158 VDTKNARESADVPISVQEATIQRREARARRDYVTADALKKDISKEGYRVFDG 209


>gi|118477986|ref|YP_895137.1| lysyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
 gi|118417211|gb|ABK85630.1| lysyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
          Length = 517

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACL 117
             R +  +ID   ++     +  IP              ++F K        
Sbjct: 69  RFRKVPKNIDPSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|33239720|ref|NP_874662.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
 gi|81665019|sp|Q7VDV0|SYI_PROMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33237245|gb|AAP99314.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
           str. CCMP1375]
          Length = 969

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET--KKFGGRSWPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN I   +++     K    ++ A V+RL
Sbjct: 600 SVAVNSHAPYLKVLTHGFALDENGRKMSKSLGNIIDPWKIINGGNNKKLEPAYGADVLRL 659

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L++   +  K   T+ 
Sbjct: 660 WVSSVDYSVDVPIGNNILSQLSDVYRKVRNTAR 692


>gi|324993400|gb|EGC25320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995288|gb|EGC27200.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK678]
 gi|327461674|gb|EGF08005.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1]
 gi|327489527|gb|EGF21320.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFTLDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|312898925|ref|ZP_07758313.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
 gi|310620087|gb|EFQ03659.1| valyl-tRNA synthetase [Megasphaera micronuciformis F0359]
          Length = 887

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 25/175 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +C   +     +++IH    + +GRKMSKS GN I   E+ +        + A  +R  +
Sbjct: 504 TCEFMKEVPFKDVFIHGLVRDSQGRKMSKSLGNGIDPLEVSDM-------YGADALRFTL 556

Query: 312 LMTHYREP---IDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS- 363
           +  +   P   + F ++R+       +K    S     +    DP  +    +D      
Sbjct: 557 VTGN--TPGNDMRFYMERVEANRNFANKIWNASKFVIMNLEDYDPEFVPT-TDDFTLADR 613

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
             + + +++ R+ TK  D   + +A+A +          N      IE L ++RL
Sbjct: 614 WILTSFNQVVRQVTKGLDSYELGDAAATV-----YDFTWNSFCDWYIE-LAKQRL 662


>gi|294784860|ref|ZP_06750148.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
 gi|294486574|gb|EFG33936.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
          Length = 859

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPA--------------------------VLSALYND--LN 360
           A   L++ W     +  ++  A                          V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSELVKNANDEIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVSSSMNSEQAAKILG 748


>gi|260942845|ref|XP_002615721.1| hypothetical protein CLUG_04603 [Clavispora lusitaniae ATCC 42720]
 gi|238851011|gb|EEQ40475.1| hypothetical protein CLUG_04603 [Clavispora lusitaniae ATCC 42720]
          Length = 724

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 27/117 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  +    L     + Y  K       I   DD    + R E     I
Sbjct: 223 PEPSGYLHIGHAKAAV----LNEYFAHTYKGKL------IIRFDDTNPTKERIEFQDSII 272

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                           +D   L          ++++  QM  L   +I  G+AY  +
Sbjct: 273 ----------------EDLALLGIK-GDQVTYSSDYFDQMYELALKMIKDGNAYCDD 312


>gi|168701952|ref|ZP_02734229.1| hypothetical protein GobsU_20668 [Gemmata obscuriglobus UQM 2246]
          Length = 864

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 19/131 (14%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGII--DPAVLSALYNDLNTVSAIQALHKLARES 375
             ++ +  +L  A   L +  +   + G     PA    L         +   HK     
Sbjct: 667 SILNLS--KLHSANKFLDRMYEVIGADGKPVEKPAFEDVLD------GNVTYKHKTLSAR 718

Query: 376 TKNHDLLPIFNAS-AHILGIEVCKEHLNKNISIAIEKL---VQERLILLK--MKKF--SS 427
           TK   +     A     LG+    E      S   EKL   V+ R    +   K+F  + 
Sbjct: 719 TKVTKVDDFMKALFDDFLGLRPNGEAAKLLASAEAEKLAAIVKGRASGKQPDRKEFVEAL 778

Query: 428 ADYIRKQLESK 438
           AD  RK+L+++
Sbjct: 779 ADA-RKKLDAR 788


>gi|90407939|ref|ZP_01216113.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3]
 gi|90310953|gb|EAS39064.1| methionyl-tRNA synthetase [Psychromonas sp. CNPT3]
          Length = 680

 Score = 39.1 bits (90), Expect = 1.5,   Method: Composition-based stats.
 Identities = 34/209 (16%), Positives = 69/209 (33%), Gaps = 45/209 (21%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D++  H     A    +   + TA   +H G++ + G KMSKS G FI  +  LE
Sbjct: 291 HFIGKDIVNFHSLFWPAVLEGSGFRKPTAVH-VH-GYVTVNGAKMSKSKGTFIKASTYLE 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                        +R                           K         +     + 
Sbjct: 349 -------HLDPECLRYYYAA----------------------KLTSKIDDLDLNLDDFMQ 379

Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK---NISIAIE 410
            + +D         ++KL   +++    +         L +++ +  L +   +   +I 
Sbjct: 380 RVNSD--------VVNKLVNLASRTAGFIA--KKYNGELSVKIAEPALYQEFIDAGESIA 429

Query: 411 KLVQERLILLKMKK-FSSADYIRKQLESK 438
            L ++R     +++  + AD   K ++ K
Sbjct: 430 SLFEKREFARAIREIMALADKANKYIDEK 458


>gi|332306246|ref|YP_004434097.1| methionyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332173575|gb|AEE22829.1| methionyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 675

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 11/81 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H  G D+ + H     A    A   + T  N+   +GF+ + G KMSKS G FI     L
Sbjct: 290 HFIGKDITYFHCLFWPAMLEGAGFRKPTGVNV---HGFVTVNGAKMSKSKGTFIKGRTYL 346

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
           E             +R     
Sbjct: 347 E-------HLNPEYLRYYFAS 360


>gi|308125801|ref|ZP_07663528.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
 gi|308113950|gb|EFO51490.1| methionine--tRNA ligase [Vibrio parahaemolyticus K5030]
          Length = 364

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 51/156 (32%), Gaps = 32/156 (20%)

Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
           ++H G++ + G KMSKS G F+  +  L+             +R       Y   ++   
Sbjct: 2   FVH-GYVTVNGAKMSKSKGTFVKASTYLD-------HLDPECLRYY-----YAAKLN--- 45

Query: 325 QRLTEAEILLSKWPQ-------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
            R+ + ++ L  + Q              S + G I       L ++          ++ 
Sbjct: 46  SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELY---NEF 102

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              + +  +L         I  I    +  N+ +  
Sbjct: 103 VAAADRIAELFEAREFGRAIREITALADKANQYVDE 138


>gi|225864578|ref|YP_002749956.1| lysyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229184824|ref|ZP_04312016.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
 gi|225788164|gb|ACO28381.1| lysine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228598629|gb|EEK56257.1| Lysyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
          Length = 517

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACL 117
             R +  +ID   ++     +  IP              ++F K        
Sbjct: 69  RFRKVPKNIDPSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|74183057|dbj|BAE20481.1| unnamed protein product [Mus musculus]
          Length = 405

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/153 (16%), Positives = 45/153 (29%), Gaps = 20/153 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + D + R  +             + +           E+ +I  N      
Sbjct: 97  HMGHVRVYTLSDTIARFQKMRG--------MQVINPMGWDAFGLPAENAAIERNLHPESW 148

Query: 100 TSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEI-I 153
           T  N +   K   RL  C +   +   T  +P      Q     +   G AY+    +  
Sbjct: 149 TQSNIKHMRKQLDRLGLCFSWDREI--TTCLPDYYKWTQYLFIKLYEAGLAYQKEALVNW 206

Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
                       +  +++E     R   K  KK
Sbjct: 207 DPVDQT----VLANEQVNEYGCSWRSGAKVEKK 235


>gi|317055676|ref|YP_004104143.1| valyl-tRNA synthetase [Ruminococcus albus 7]
 gi|315447945|gb|ADU21509.1| valyl-tRNA synthetase [Ruminococcus albus 7]
          Length = 897

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 35/92 (38%), Gaps = 12/92 (13%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     + IH    + +GRKMSKS GN I   E+++        + A  +R  ++ 
Sbjct: 526 AYTGKAPFDTVLIHGIVRDSQGRKMSKSLGNGIDPLEVID-------QYGADALRFMLVQ 578

Query: 314 THYREP---IDFTVQRLTEAEILLSKWPQTST 342
                P   + ++ +++       +K    S 
Sbjct: 579 GS--SPGNDMRYSEEKIVAMRNFTNKIWNASR 608


>gi|296328927|ref|ZP_06871435.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153916|gb|EFG94726.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 859

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEILD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPA--------------------------VLSALYND--LN 360
           A   L++ W     +  ++  A                          V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSELVKNANDKIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVSSSMNSEQAAKILG 748


>gi|289670254|ref|ZP_06491329.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 692

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|289432203|ref|YP_003462076.1| leucyl-tRNA synthetase [Dehalococcoides sp. GT]
 gi|288945923|gb|ADC73620.1| leucyl-tRNA synthetase [Dehalococcoides sp. GT]
          Length = 813

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 36/181 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       +            E    ++ + G +    +KMSKS G
Sbjct: 528 PVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPFKKLF-NQGIIVSNHQKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +T + L+              +R   M +  + +  ++    L+     L++     T
Sbjct: 587 NVVTPDNLVAEVGT-------DAVRAYLMFVGPWDQGGEWNDSGLSGMSRWLNRVWNLFT 639

Query: 343 SKGIIDPAVLSA----------------LYND---LNTVSAIQALHKLARESTKNHDLLP 383
            +     A   A                +  +    NTV  + AL +L+    K  +   
Sbjct: 640 EEYTPQTASAEAERELKRTLHQTIKKITMDIERLRFNTV--VAALMELSNSLAKLKETAA 697

Query: 384 I 384
           I
Sbjct: 698 I 698


>gi|257455748|ref|ZP_05620976.1| isoleucine-tRNA ligase [Enhydrobacter aerosaccus SK60]
 gi|257446876|gb|EEV21891.1| isoleucine-tRNA ligase [Enhydrobacter aerosaccus SK60]
          Length = 1129

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 17/111 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF--ITINELLETKKFGGRSWPAPVIRL 309
           S           +  H   ++ +G K+SKS GN       EL          +   ++RL
Sbjct: 764 SEAIYGRPPYKQVLTHGFTVDAKGYKLSKSKGNTKGFEPQEL-------ANKYGIDIVRL 816

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            +  + YR  +  + +       +  +   T           L A  +D +
Sbjct: 817 WVGSSDYRYEMAVSTEGFARTTDMYRRIRNTIR--------FLLANTDDFD 859


>gi|240849919|ref|YP_002971308.1| isoleucyl-tRNA synthetase [Bartonella grahamii as4aup]
 gi|240267042|gb|ACS50630.1| isoleucyl-tRNA synthetase [Bartonella grahamii as4aup]
          Length = 971

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 25/158 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G+KMSKS GN +   E+++T         A + RL +
Sbjct: 618 SCGTRACSPYKAVITHGFTLDENGKKMSKSLGNTVVPQEIIKTSG-------ADIFRLWV 670

Query: 312 LMTHYREPIDFTVQRL--------TEAEILLS---KWPQTSTSKGIIDPAVLSALYNDLN 360
           + T Y     +  QRL         ++   L    +W   + +    +     AL  DL 
Sbjct: 671 MTTDY-----WEDQRLGKKILQTNVDSYRKLRNAIRWMLGTLAYDDGEEISYGALP-DLE 724

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
               +  L +L +   + +D          +L   + +
Sbjct: 725 KFI-LHRLFELDQLINRAYDEFDFKKIMRALLDFSIIE 761


>gi|241204713|ref|YP_002975809.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240858603|gb|ACS56270.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 516

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     K V ++    +   K+ + AR E            
Sbjct: 20  PHIGHAYELIATDAMARYQRLDG--KDVFFLTGTDEHGQKMQQTARAE------GITAQA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+ +F +    L   +     R T   H      + + +  +G  Y+ +    +  
Sbjct: 72  LADRNSGEF-QAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWYSV 130

Query: 157 SSIPNY 162
                Y
Sbjct: 131 RDEAYY 136


>gi|42781306|ref|NP_978553.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
 gi|81569209|sp|Q739A1|SYI2_BACC1 RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|42737228|gb|AAS41161.1| isoleucyl-tRNA synthetase [Bacillus cereus ATCC 10987]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +       F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEDQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------QFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|319957355|ref|YP_004168618.1| histidine kinase [Nitratifractor salsuginis DSM 16511]
 gi|319419759|gb|ADV46869.1| histidine kinase [Nitratifractor salsuginis DSM 16511]
          Length = 785

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 36/218 (16%), Positives = 68/218 (31%), Gaps = 55/218 (25%)

Query: 263 NIWI---HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
             W+   HN  L  E +K ++      T+  + E +K         VI        +R+P
Sbjct: 529 RHWLLKGHNKLLTKEVQKATEEVVAQRTM--IREREKLAVLGEMIGVI-----AHQWRQP 581

Query: 320 ID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY---------NDL-------- 359
           ++    ++Q L        ++      +  ID  V   L           D         
Sbjct: 582 LNSLALSLQNLK------YRYRDGEVDEEFIDRFVGKNLDRINFLNQTIEDFRNFFHNRE 635

Query: 360 -----NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
                +   AI+A+  +     +N+ +         I G +   E +          L+ 
Sbjct: 636 GKKQFSVREAIKAIFAIYSLDLRNNGI-----EFRGIEGDDFELEGIKSEFQQIFLSLIT 690

Query: 415 ERLILLKMKK----FSSADYIRKQLESKGFILEDYKNP 448
                L+ KK    +     IR  L+++  + ED    
Sbjct: 691 NSKEALEHKKGGARW-----IRVILKNRQIVFEDSAGG 723


>gi|307178944|gb|EFN67462.1| Probable leucyl-tRNA synthetase, mitochondrial [Camponotus
           floridanus]
          Length = 811

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DVL R  R     K V +              A      I  
Sbjct: 3   PYPSGALHMGHVRVYTISDVLARFYRLKG--KNVIHPMGWDAFGLPAENAA------IER 54

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
               ++ TS+N +       +L       +  AT   ++      L   +   G AY+  
Sbjct: 55  KIDPAVWTSENIKTMHDQLKKLNYSFDWEREFATCDADYYKWTQDLFLKLFDKGLAYQKK 114

Query: 150 NEIIFD 155
             + +D
Sbjct: 115 AYVNWD 120


>gi|289662871|ref|ZP_06484452.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
           NCPPB702]
          Length = 692

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|283768901|ref|ZP_06341811.1| isoleucine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104454|gb|EFC05828.1| isoleucine--tRNA ligase [Bulleidia extructa W1219]
          Length = 908

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 37/110 (33%), Gaps = 15/110 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++ +G KMSKS GN +   +++           A V RL  
Sbjct: 567 STAVHGTAPYKEVLSHGYVVDSKGEKMSKSVGNVVNPLDIIHVNG-------ADVFRLWA 619

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIIDPAVLSALYNDLN 360
           + + ++E +      + +      K   T     G I         +D +
Sbjct: 620 MASDFKEDLKLGDSNIKQTSEQYRKIRNTFRFLLGNIS-------NDDFD 662


>gi|269114822|ref|YP_003302585.1| Valyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322447|emb|CAX37182.1| Valyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 839

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 22/110 (20%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM------ 311
            +   ++ +H    + +GRKMSKS GN I   ++++        + + V+R+++      
Sbjct: 493 QKPFEHLLLHGLVRDSQGRKMSKSLGNGINPIQVID-------EYGSDVLRMSLIFNCTP 545

Query: 312 -LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
            L       I+++ +++  A++  +K+   +     I  ++   +  D N
Sbjct: 546 GL------DINYSDEKIQGAKLFANKFWNIARFVENIPVSITEKI--DFN 587


>gi|228993761|ref|ZP_04153666.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
 gi|228765972|gb|EEM14621.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
          Length = 543

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R     + V YV         I  RA+QE            I
Sbjct: 18  HLGHVAGLLPGDILARYYRTKG--ENVLYVSGSDCNGTPIAIRAKQE------GVTAKEI 69

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHAY 146
                ++F +    L         R  A +H   +  +   ++  G  Y
Sbjct: 70  ADYYHEEFERCFKELGFTY-DCYTRTDAQHHHETVQKIFLRLLEEGFIY 117


>gi|148878500|sp|Q4AAS1|SYI_MYCHJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|144227432|gb|AAZ44122.2| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 886

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDI+  G D       + +  S           +  H   ++ +G KMSKS GN +  
Sbjct: 539 PPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDP 598

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +L         +   + RL +  + Y   I ++     +   +  K   T  
Sbjct: 599 LLILS-------KYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVR 645


>gi|71893387|ref|YP_278833.1| isoleucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 887

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 39/114 (34%), Gaps = 7/114 (6%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
             FDI+  G D       + +  S           +  H   ++ +G KMSKS GN +  
Sbjct: 540 PPFDIYFEGSDQYRGWFNSSLINSVIYFGFSPYKKLLSHGFVVDAKGNKMSKSRGNGVDP 599

Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +L         +   + RL +  + Y   I ++     +   +  K   T  
Sbjct: 600 LLILS-------KYGCDIFRLWVANSEYYNDIVYSEAIFEQNVEIYRKIRNTVR 646


>gi|15604530|ref|NP_221048.1| valyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
 gi|6226199|sp|Q9ZCN6|SYV_RICPR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|3861224|emb|CAA15124.1| VALYL-TRNA SYNTHETASE (valS) [Rickettsia prowazekii]
 gi|292572319|gb|ADE30234.1| Valyl-tRNA synthetase [Rickettsia prowazekii Rp22]
          Length = 814

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I +S     I    NI + +G+ L  +  KMSKS GN +   
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKSHLHQNILPWKNI-MVSGWCLAEDRSKMSKSKGNVLVPE 548

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +LLE        + A VIR     +       ++   +   + L++K    + 
Sbjct: 549 KLLER-------YGADVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNAAK 594


>gi|109898216|ref|YP_661471.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
 gi|123064668|sp|Q15UM1|SYM_PSEA6 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|109700497|gb|ABG40417.1| methionyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
          Length = 675

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 11/81 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKT-ANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           H  G D+ + H     A    A   + T  N+   +GF+ + G KMSKS G FI     L
Sbjct: 290 HFIGKDITYFHCLFWPAMLEGAGFRKPTGVNV---HGFVTVNGAKMSKSKGTFIKGRTYL 346

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
           E             +R     
Sbjct: 347 E-------HLNPEYLRYYFAS 360


>gi|319638559|ref|ZP_07993321.1| isoleucyl-tRNA synthetase [Neisseria mucosa C102]
 gi|317400308|gb|EFV80967.1| isoleucyl-tRNA synthetase [Neisseria mucosa C102]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 34/94 (36%), Gaps = 15/94 (15%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   E+          + A ++RL    T Y   +  + + 
Sbjct: 596 HGFVVDQNGRKMSKSIRNVVAPQEV-------YNEFGADILRLWAASTDYSGELSISKEI 648

Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L        +   T +         L A  +D N
Sbjct: 649 LKRVTESYRRIRNTLS--------FLFANLSDFN 674


>gi|311030540|ref|ZP_07708630.1| isoleucyl-tRNA synthetase [Bacillus sp. m3-13]
          Length = 1029

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 12/106 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G+D       + +A S           +      L+ EGRKMSKS GN +   +L
Sbjct: 544 DVICEGIDQTRGWFYSLLAVSTLFTGKVPYKRVLSTGHILDEEGRKMSKSKGNALNPMDL 603

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILL 334
           ++        + A   R A+L      P +   F+ + + EA+  +
Sbjct: 604 VD-------KFGADAFRWALLADS--APWNNKRFSERVVIEAKSKV 640


>gi|296109261|ref|YP_003616210.1| leucyl-tRNA synthetase [Methanocaldococcus infernus ME]
 gi|295434075|gb|ADG13246.1| leucyl-tRNA synthetase [Methanocaldococcus infernus ME]
          Length = 923

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 57/151 (37%), Gaps = 26/151 (17%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
               DLI  H    I         E      + NG++ +EG+K+SKS G  + + E+ ET
Sbjct: 574 CSAKDLIPNHLTFYIFNHVAIFPEELWPRGIVVNGYVTIEGKKLSKSKGPLLPVLEVAET 633

Query: 295 KKFGGRSWPAPVIRLAMLMT---HYREPIDFTVQRLTEAEILLSKWPQTS--------TS 343
                  + A V R  +           I F+   L + + +L +    +        + 
Sbjct: 634 -------FGADVGRFYITTCAELPQDADIKFSE--LEKTKRVLERLYNFTKEVINMKDSE 684

Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
           +  ID  +LS L        A++  HKL  E
Sbjct: 685 EREIDRWLLSKLN------RALKDYHKLMEE 709


>gi|219122104|ref|XP_002181393.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407379|gb|EEC47316.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 639

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 11/60 (18%)

Query: 408 AIEK---LVQERLILLKMKKFSSADYIRKQLESKGF------ILEDYKNPDNGQRMTRWK 458
            IEK   L++ R     +  F  AD +R+++ +  F      +++D+   + G   ++WK
Sbjct: 66  EIEKMNLLIERRAAARWIGDFEVADALRREIATHKFPANIEVVIQDFPRTEGG--GSKWK 123


>gi|73748126|ref|YP_307365.1| leucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
 gi|123746148|sp|Q3ZWQ1|SYL_DEHSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|73659842|emb|CAI82449.1| leucyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
          Length = 813

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 36/181 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       +            E    ++ + G +    +KMSKS G
Sbjct: 528 PVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPFKKLF-NQGIIVSNHQKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +T + L+              +R   M +  + +  ++    L+     L++     T
Sbjct: 587 NVVTPDNLVAEVGT-------DAVRAYLMFVGPWDQGGEWNDSGLSGMSRWLNRVWNLFT 639

Query: 343 SKGIIDPAVLSA----------------LYND---LNTVSAIQALHKLARESTKNHDLLP 383
            +     A   A                +  +    NTV  + AL +L+    K  +   
Sbjct: 640 EEYTPQTASAEAERELKRTLHQTIKKITMDIERLRFNTV--VAALMELSNSLAKLKETAA 697

Query: 384 I 384
           I
Sbjct: 698 I 698


>gi|19704849|ref|NP_602344.1| leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|32171570|sp|Q8RIQ3|SYL_FUSNN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|19712730|gb|AAL93643.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
          Length = 859

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPA--------------------------VLSALYND--LN 360
           A   L++ W     +  ++  A                          V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSELVKNANDEIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVSSSMNSEQAAKILG 748


>gi|147668810|ref|YP_001213628.1| leucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
 gi|254782493|sp|A5FP73|SYL_DEHSB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146269758|gb|ABQ16750.1| leucyl-tRNA synthetase [Dehalococcoides sp. BAV1]
          Length = 813

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 36/181 (19%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H       +            E    ++ + G +    +KMSKS G
Sbjct: 528 PVDLYTGGAEHAVMHLFYSRFFTKALRDMGIIDFGEPFKKLF-NQGIIVSNHQKMSKSKG 586

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +T + L+              +R   M +  + +  ++    L+     L++     T
Sbjct: 587 NVVTPDNLVAEVGT-------DAVRAYLMFVGPWDQGGEWNDSGLSGMSRWLNRVWNLFT 639

Query: 343 SKGIIDPAVLSA----------------LYND---LNTVSAIQALHKLARESTKNHDLLP 383
            +     A   A                +  +    NTV  + AL +L+    K  +   
Sbjct: 640 EEYTPQTASAEAERELKRTLHQTIKKITMDIERLRFNTV--VAALMELSNSLAKLKETAA 697

Query: 384 I 384
           I
Sbjct: 698 I 698


>gi|320539653|ref|ZP_08039317.1| leucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
 gi|320030265|gb|EFW12280.1| leucyl-tRNA synthetase [Serratia symbiotica str. Tucson]
          Length = 860

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 60/160 (37%), Gaps = 23/160 (14%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTV 324
             +     KMSKS  N I   E++E        + A  +RL M+      P    +++  
Sbjct: 611 ELVYAGMSKMSKSKNNGIDPQEMVE-------KYGADTVRLFMMFA---SPAEMTLEWQE 660

Query: 325 QRLTEAEILLSK-WPQTST--SKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHD 380
             +  A   L + W  T     KG + P  ++ L  D     A+ + LHK   + + +  
Sbjct: 661 SGVEGASRFLKRVWKLTYDHLEKGAVQPLDVTTLNED---QKALRRDLHKTIAKVSDDIG 717

Query: 381 LLPIFN-ASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
               FN A A ++ +        +        L+QE L+ 
Sbjct: 718 RRQTFNTAIAAVMELMNKLARAPQESEQD-RALLQEALLA 756


>gi|307168597|gb|EFN61655.1| Leucyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
          Length = 1143

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 32/84 (38%), Gaps = 9/84 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DLI  H    +         +          NG L L   KMSKS GNF+T
Sbjct: 624 PVDLRTSGKDLIQNHLTYFLYNHTAIWPNQPELWPKGIRANGHLLLNSTKMSKSEGNFLT 683

Query: 288 INELLETKKFGGRSWPAPVIRLAM 311
           + E +E        + A   RL +
Sbjct: 684 LAEAIE-------KYSADGTRLCL 700


>gi|294626909|ref|ZP_06705500.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
 gi|292598769|gb|EFF42915.1| methionyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
           str. ICPB 11122]
          Length = 691

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|242242928|ref|ZP_04797373.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
 gi|242233643|gb|EES35955.1| valyl-tRNA synthetase [Staphylococcus epidermidis W23144]
          Length = 886

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 489 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 546

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 547 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAAR 589


>gi|157413338|ref|YP_001484204.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
 gi|166980079|sp|A8G4T7|SYL_PROM2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|157387913|gb|ABV50618.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
          Length = 856

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/159 (15%), Positives = 49/159 (30%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ D++ R   + +  K V +              A      I  
Sbjct: 53  PYPSGNLHMGHVRNYVITDLIARF--HRFKGKSVLHPMGWDAFGLPAENAA------IER 104

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYEA 148
             + S+ T +N          L       +  AT     +I      ++ +   G  Y+ 
Sbjct: 105 GISPSVWTKQNISHMRSQLKLLGLSVDWDREFATCDENYYIWTQYLFLE-LYKAGLVYQK 163

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            +E+      +       +  ++D +    R      KK
Sbjct: 164 ESEVNWDPVDNT----VLANEQVDSEGKSWRSGAVVEKK 198


>gi|86607336|ref|YP_476099.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
 gi|109895045|sp|Q2JRC3|SYR_SYNJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|86555878|gb|ABD00836.1| arginyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
          Length = 598

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           +MSK  GNF+++N+L++  + G         R  +L +    PI+F +  
Sbjct: 411 RMSKRTGNFVSLNDLIDDPEIGVGV---DAARWFLLSSSMDSPINFDLDL 457


>gi|58581547|ref|YP_200563.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84623480|ref|YP_450852.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188577209|ref|YP_001914138.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|68565959|sp|Q5H1J3|SYM_XANOR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|123766596|sp|Q2P4E9|SYM_XANOM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226710939|sp|B2SRQ4|SYM_XANOP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|58426141|gb|AAW75178.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
 gi|84367420|dbj|BAE68578.1| Methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|188521661|gb|ACD59606.1| methionyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 694

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|58337105|ref|YP_193690.1| valyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
 gi|81311486|sp|Q5FKW5|SYV_LACAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|58254422|gb|AAV42659.1| valine-tRNA ligase [Lactobacillus acidophilus NCFM]
          Length = 879

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS    +     ++ +H    + +GRKMSKS GN I   ++++  
Sbjct: 480 TGYDIIFFWVSRMIFQSLHFTKERPFKDVVLHGLIRDEQGRKMSKSLGNGIDPMDVID-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|328467923|gb|EGF38960.1| leucyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
          Length = 82

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 9/83 (10%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  +++++        + A  +RL  M M      I ++   L  
Sbjct: 7   LGDNHEKMSKSKGNVVNPDDVVD-------EYGADTLRLYEMFMGPLDAGIAWSTDGLAG 59

Query: 330 AEILLSK-WPQTSTSKGIIDPAV 351
           A   L + W      +G +   +
Sbjct: 60  ARKFLDRVWSAFIDDEGKLRDRI 82


>gi|254448547|ref|ZP_05062007.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
 gi|198261930|gb|EDY86215.1| methionyl-tRNA synthetase [gamma proteobacterium HTCC5015]
          Length = 680

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A    A      + ++ H GFL ++G+KMSKS G FI     L+
Sbjct: 289 HFIGKDIAYFHTLFWPAMLKGA-GFRPPSGVFCH-GFLTVDGQKMSKSRGTFIKARTYLD 346

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 347 -------HLSPEYLRYYF 357


>gi|154279182|ref|XP_001540404.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
 gi|150412347|gb|EDN07734.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
          Length = 324

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 13/144 (9%)

Query: 21  IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            +P     YV  P  Y     H+G+   MI+ DVL R              + +T  D+ 
Sbjct: 53  REPDKKPFYVTTPIFYVNAAPHVGHLYTMILADVLKRWQILLGNTD----AKLLTGTDEH 108

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
            ++    +  +  +      +  +N + F ++  R   +   H  R T+   +   +   
Sbjct: 109 GLK---IQQAAAALGMTPQALCDQNCKTF-QNLARKGNVGYDHFIRTTDAEHKEADM--- 161

Query: 139 IILHGHAYEANNEIIFDTSSIPNY 162
           +   G+ Y + +E  +  S    Y
Sbjct: 162 LNHRGYIYTSKHEGWYSVSDEAFY 185


>gi|94988868|ref|YP_596969.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94992758|ref|YP_600857.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
 gi|94542376|gb|ABF32425.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
 gi|94546266|gb|ABF36313.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
          Length = 933

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   I  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDIRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|52425686|ref|YP_088823.1| methionyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
 gi|68565974|sp|Q65S22|SYM_MANSM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|52307738|gb|AAU38238.1| MetG protein [Mannheimia succiniciproducens MBEL55E]
          Length = 686

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+  + T NI++H G++ + G KMSKS G FI     L 
Sbjct: 290 HFIGKDIMYFHSLFWPAMLDGANYRKPT-NIFVH-GYVTVNGEKMSKSRGTFIQAATYL- 346

Query: 294 TKKFGGRSWPAPVIRLA 310
                 +      +R  
Sbjct: 347 ------KHLDPECLRYY 357


>gi|21242139|ref|NP_641721.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
 gi|25009359|sp|Q8PMP0|SYM_XANAC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21107551|gb|AAM36257.1| methionyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
           306]
          Length = 694

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|319791139|ref|YP_004152779.1| leucyL-tRNA synthetase [Variovorax paradoxus EPS]
 gi|315593602|gb|ADU34668.1| leucyl-tRNA synthetase [Variovorax paradoxus EPS]
          Length = 876

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           Y C    Y     H+G+ R   + D+L R LR       +          D     A  E
Sbjct: 36  YACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGYNVLMPMGW------DAFGLPA--E 87

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILH 142
           + ++      +  T +N          +  LA           P      Q     ++  
Sbjct: 88  NAALKNGVPPAKWTYENIDYMRGQLQAMG-LAIDWSREIATCDPSYYKWNQWLFLKMLEK 146

Query: 143 GHAYEANNEIIFD 155
           G AY     + +D
Sbjct: 147 GVAYRKTQVVNWD 159


>gi|313890809|ref|ZP_07824434.1| isoleucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120910|gb|EFR44024.1| isoleucine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
          Length = 933

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 13/144 (9%)

Query: 21  IDPSNIRMYV-CGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY---VRNITD 74
           ++      ++  GP  Y     H+G+A   I  D++ R       +           +  
Sbjct: 43  LNEGKPSFHLHDGP-PYANGNIHVGHALNKISKDIIVRAKSMSGYQAPYVPGWDTHGLP- 100

Query: 75  IDDKIIERA--RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
           I+  + ++   R+E       +          ++  +D  RL   A   +P  T    + 
Sbjct: 101 IEQVLAKKGVKRKEMDLAQYLEMCRDYAMSQVEKQREDFKRLGVSADWDKPYITLMPEYE 160

Query: 130 PQMIYLIQNIILHGHAYEANNEII 153
              I +   +   G+ Y     + 
Sbjct: 161 ANQIRVFGAMADKGYIYRGAKPVY 184



 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 18/141 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNTILPSDV-------TKQYGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
                   +  ++  L +      K   T           L A  +D N  +      + 
Sbjct: 623 TSVDTDNDVRVSMDILGQVSETYRKIRNTLR--------FLIANTSDFN-PNLDTVAFED 673

Query: 372 ARESTKNHDLLPIFNASAHIL 392
              + K   +   FN    + 
Sbjct: 674 LSAADKYMTIK--FNQLVEVF 692


>gi|308499657|ref|XP_003112014.1| CRE-EARS-1 protein [Caenorhabditis remanei]
 gi|308268495|gb|EFP12448.1| CRE-EARS-1 protein [Caenorhabditis remanei]
          Length = 1151

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 54/164 (32%), Gaps = 42/164 (25%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L +YY  E     +    D +    E A  EH         
Sbjct: 205 GYLHIGHAKAAL-------LNQYYQQEFEGQLIMRFDDTN-PAKENAHFEHVI------- 249

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
                       +D   L  + P     +++H   ++ + + ++  G A+  + +     
Sbjct: 250 -----------KEDLAMLNIV-PDRWTHSSDHFEMLLTMCEKLLKEGKAFVDDTD----- 292

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
                  + + RK  E +  +R      +KN     LW+     
Sbjct: 293 -------TETMRKEREDRQDSRNRSNTPEKNLQ---LWEEMKKG 326


>gi|153010355|ref|YP_001371569.1| isoleucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
 gi|151562243|gb|ABS15740.1| isoleucyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
          Length = 970

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 65/189 (34%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++  G+KMSKS GN +T  ++
Sbjct: 595 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYNAVVTHGFTMDEHGKKMSKSLGNTVTPQDV 654

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 655 IKESG-------ADILRLWVMTTDY-----WEDQRLGKSIIQTNIDAYRKLRNTIRWMLG 702

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +      N           +  L ++ R      D   I       + 
Sbjct: 703 TLAHDKGENLPYA------NLPELERLMLHRLTELDEVVRSGYDAFDFKRIARTLIDFMN 756

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 757 VELSAFYFD 765


>gi|118443863|ref|YP_877455.1| leucyl-tRNA synthetase [Clostridium novyi NT]
 gi|166231600|sp|A0PYK3|SYL_CLONN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|118134319|gb|ABK61363.1| leucyl-tRNA synthetase [Clostridium novyi NT]
          Length = 812

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 37/97 (38%), Gaps = 16/97 (16%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I  ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTIAPDDYI-------KEYGADVFRMYLMFGFAYSEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
             +      + K  +             + + +  NT
Sbjct: 614 DAIKSMSKFVDKVERILADS-------RTQMADSKNT 643


>gi|56477937|ref|YP_159526.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
 gi|68565963|sp|Q5P239|SYM_AZOSE RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|56313980|emb|CAI08625.1| methionyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
          Length = 718

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 20/46 (43%), Gaps = 6/46 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           NGFL ++G KMSKS G FIT         +  R      +R     
Sbjct: 340 NGFLTVDGAKMSKSRGTFITAR------SYVSRGLNPEWLRYYFAT 379


>gi|116629854|ref|YP_815026.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238853954|ref|ZP_04644311.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282851633|ref|ZP_06260998.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311110508|ref|ZP_07711905.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|116095436|gb|ABJ60588.1| valyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|238833399|gb|EEQ25679.1| valine--tRNA ligase [Lactobacillus gasseri 202-4]
 gi|282557601|gb|EFB63198.1| valine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|311065662|gb|EFQ46002.1| valine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 879

 Score = 39.1 bits (90), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 7/79 (8%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q     +     ++ +H    + +GRKMSKS GN +   ++++  
Sbjct: 480 TGYDIIFFWVSRMIFQGLHFTKKRPFKDVVLHGLMRDEQGRKMSKSLGNGVDPMDVVD-- 537

Query: 296 KFGGRSWPAPVIRLAMLMT 314
                 + A  +R  +L  
Sbjct: 538 -----KYGADALRWFLLNG 551


>gi|229091594|ref|ZP_04222799.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
 gi|228691743|gb|EEL45493.1| Lysyl-tRNA synthetase [Bacillus cereus Rock3-42]
          Length = 517

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 31/112 (27%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIER--ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
             R +    D    +   R            +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFVKYIGRPYCDIPDPYGCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|188585946|ref|YP_001917491.1| Isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|254782421|sp|B2A2I8|SYI_NATTJ RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|179350633|gb|ACB84903.1| Isoleucyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 926

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 8/92 (8%)

Query: 252 SCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           +  A + E      + NG++   EG+KMSKS GN I   ++          + A ++RL 
Sbjct: 570 TAVATKGESPYRECLTNGWVVDGEGKKMSKSQGNVIAPQDITN-------QYGADILRLW 622

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +  + +++ +  + + L +      K   T+ 
Sbjct: 623 VASSEFKQDVRVSQKILKQTAEAYRKIRNTAR 654


>gi|148642131|ref|YP_001272644.1| methionyl-tRNA synthetase [Methanobrevibacter smithii ATCC 35061]
 gi|222444690|ref|ZP_03607205.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350771|ref|ZP_05976188.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
 gi|187647750|sp|A5UJ98|SYM_METS3 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148551148|gb|ABQ86276.1| methionyl-tRNA synthetase, MetG [Methanobrevibacter smithii ATCC
           35061]
 gi|222434255|gb|EEE41420.1| hypothetical protein METSMIALI_00303 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860526|gb|EFC92824.1| methionine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
          Length = 660

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 17/124 (13%)

Query: 29  YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      H+G+ R   +  D+  R  R    +  V  V    +    I  +A +E 
Sbjct: 12  YANGP-----CHLGHIRSTYLPADIYARYNRMI--DNDVLLVCATDEHGTPIAVKADKE- 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHA 145
                N     I  +     V+D   +   +  +  R T+  H          +   G  
Sbjct: 64  -----NKKPIEIAKRYHDMIVRDVESMNI-SLDNFTRTTDDLHYEIAQNFFLELYNKGLI 117

Query: 146 YEAN 149
           Y+ +
Sbjct: 118 YKKD 121


>gi|119899492|ref|YP_934705.1| methionyl-tRNA synthetase [Azoarcus sp. BH72]
 gi|187645705|sp|A1KAG3|SYM_AZOSB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119671905|emb|CAL95819.1| MetG protein [Azoarcus sp. BH72]
          Length = 723

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 20/46 (43%), Gaps = 6/46 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           NGFL ++G KMSKS G FIT         +  +      +R     
Sbjct: 336 NGFLTVDGAKMSKSRGTFITAR------SYIVQGLNPEWLRYYFAS 375


>gi|332653566|ref|ZP_08419311.1| valine--tRNA ligase [Ruminococcaceae bacterium D16]
 gi|332518712|gb|EGJ48315.1| valine--tRNA ligase [Ruminococcaceae bacterium D16]
          Length = 876

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 7/83 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      I  +C   +      ++IH    + +GRKMSKS GN I   E+
Sbjct: 482 DVLVTGYDIIFFWVARMIFSACEQTKQPPFHTVFIHGLVRDDKGRKMSKSLGNGIDPLEI 541

Query: 292 LETKKFGGRSWPAPVIRLAMLMT 314
            E        + A  +R  ++  
Sbjct: 542 AE-------KYGADALRFNLVTG 557


>gi|254804285|ref|YP_003082506.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha14]
 gi|254667827|emb|CBA03822.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha14]
          Length = 878

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 774


>gi|242373956|ref|ZP_04819530.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242348310|gb|EES39912.1| valyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 887

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 490 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 547

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 548 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAAR 590


>gi|254583225|ref|XP_002499344.1| ZYRO0E09570p [Zygosaccharomyces rouxii]
 gi|238942918|emb|CAR31089.1| ZYRO0E09570p [Zygosaccharomyces rouxii]
          Length = 706

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 27/120 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  I    L     + Y  K       I   DD    + R E      
Sbjct: 207 PEPSGYLHIGHAKAAI----LNEYFAHAYKGKL------IIRFDDTNPSKERME------ 250

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
                          ++D   +          ++++  +M  L   +I  G AY  + ++
Sbjct: 251 ----------FQDAILEDLELMGIK-GDKITYSSDYFQEMYDLCVQLIKEGKAYCDDTDV 299


>gi|210629937|ref|ZP_03296184.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
 gi|210160754|gb|EEA91725.1| hypothetical protein COLSTE_00068 [Collinsella stercoris DSM 13279]
          Length = 533

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 37/126 (29%), Gaps = 15/126 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I+ DV  R  R          V+ +T +D+   + A           
Sbjct: 16  VNADPHLGTAYSTIIADVQARYRRAAGY-----SVKFLTGMDEHGQKVAEAAEKH---GM 67

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANN 150
                       F +    L         R T   P+    +Q     +   G+ Y+ + 
Sbjct: 68  TPQEWCDSQAPHFHELWEELEISNDDF-IRTTE--PRQKRAVQYLWERMQEAGYIYKGSY 124

Query: 151 EIIFDT 156
           +  +  
Sbjct: 125 DGWYCV 130


>gi|73666721|ref|YP_302737.1| valyl-tRNA synthetase [Ehrlichia canis str. Jake]
 gi|90101526|sp|Q3YT16|SYV_EHRCJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|72393862|gb|AAZ68139.1| valyl-tRNA synthetase [Ehrlichia canis str. Jake]
          Length = 802

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 42/117 (35%), Gaps = 14/117 (11%)

Query: 233 IHGGGLDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
           I     DL    HE         I Q+   +      NI I    L  +  KMSKS GN 
Sbjct: 473 ISATPADLRAQSHEIIRSWAFYTILQAYYHNNDIPWKNIMISGWCLAEDKTKMSKSKGNV 532

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +T N+LL+        + A V+R     +       F+ + L   +   +K    S 
Sbjct: 533 LTPNKLLD-------EYGADVVRYWTANSKLGADTTFSNEILKLGKRFTTKLWNASK 582


>gi|34763278|ref|ZP_00144237.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|27887049|gb|EAA24161.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
          Length = 862

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 608 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 660

Query: 330 AEILLSK-WPQTSTSKGIIDPA--------------------------VLSALYND--LN 360
           A   L++ W     +  ++  A                          V  A+ N+   N
Sbjct: 661 AYRFLTRVWRLVFENSELVKNANDEIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFN 720

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 721 T--AIAANMELINEVQTYVASSMNSEQAAKILG 751


>gi|319400980|gb|EFV89199.1| valyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
          Length = 876

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAAR 579


>gi|292670061|ref|ZP_06603487.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648249|gb|EFF66221.1| methionine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 513

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 15/84 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G +++  H         C   A  ++    ++ H G+L ++G KMSKS GN +  
Sbjct: 255 DVHLVGKEIVRFH----TIIWGCMLMALGLDLPKKVYGH-GWLIVDGAKMSKSVGNVVDP 309

Query: 289 NELLETKKFGGRSWPAPVIRLAML 312
             L+E        + A  +R  +L
Sbjct: 310 IALIE-------EFGADAVRYFLL 326


>gi|228999808|ref|ZP_04159381.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
 gi|228759957|gb|EEM08930.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
          Length = 543

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R     + V YV         I  RA+QE            I
Sbjct: 18  HLGHVAGLLPGDILARYYRTKG--ENVLYVSGSDCNGTPIAIRAKQE------GVTAKEI 69

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHAY 146
                ++F +    L         R  A +H   +  +   ++  G  Y
Sbjct: 70  ADYYHEEFERCFKELGFTY-DCYTRTDAQHHHETVQKIFLRLLEEGFIY 117


>gi|196001647|ref|XP_002110691.1| hypothetical protein TRIADDRAFT_54976 [Trichoplax adhaerens]
 gi|190586642|gb|EDV26695.1| hypothetical protein TRIADDRAFT_54976 [Trichoplax adhaerens]
          Length = 1241

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 40/113 (35%), Gaps = 27/113 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +   +       + G+    +     D  + + E+A  E   I      
Sbjct: 198 GYLHIGHAKAAL---LNQHYQTNFKGKLIFRF-----DDTNPVKEKADFEKVII------ 243

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                       +D + L    P      ++H P M+ L + +I  G AY  +
Sbjct: 244 ------------EDVSLLQVK-PDIFSHTSDHFPLMLELAEKLIKEGKAYADD 283


>gi|108804372|ref|YP_644309.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
 gi|108765615|gb|ABG04497.1| valyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
          Length = 853

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 32/86 (37%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                    + +H+  L  +G KMSKS GN I   +L E        +    +R  +L  
Sbjct: 506 FTGEVPFRKVNVHSIVLASDGTKMSKSKGNVIDPLDLFE-------EYGTDAVRFGLLYQ 558

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              +   ++ +R +     ++K    
Sbjct: 559 SSTQDFAYSHERASMGRSFVTKLWNA 584


>gi|314933819|ref|ZP_07841184.1| valine--tRNA ligase [Staphylococcus caprae C87]
 gi|313653969|gb|EFS17726.1| valine--tRNA ligase [Staphylococcus caprae C87]
          Length = 876

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 20/164 (12%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
                 + A  +R  +       P   + ++ +++      ++K W     S   I    
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAARFSLMNIGEEF 589

Query: 352 LSALYNDLNTVSAIQALHKLA----RESTKNHDLLPIFNASAHI 391
                 D++    +    K       E+ K    L        +
Sbjct: 590 KV---EDIDLSGNLSLADKWILTRLNETIKTVTDLSDKYEFGEV 630


>gi|260888295|ref|ZP_05899558.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
 gi|260861831|gb|EEX76331.1| methionine--tRNA ligase [Selenomonas sputigena ATCC 35185]
          Length = 665

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 11/82 (13%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D+H  G +++  H    I   C    ++     +   +G+L ++G KMSKS GN +   +
Sbjct: 264 DVHLVGKEIVRFH---SIIWPCILMALDLPLPKMVYGHGWLIVDGDKMSKSKGNVVDPVQ 320

Query: 291 LLETKKFGGRSWPAPVIRLAML 312
           L++        + A  IR  +L
Sbjct: 321 LID-------EFGADAIRYFLL 335


>gi|238927712|ref|ZP_04659472.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884428|gb|EEQ48066.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 516

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G +++  H         C   A  ++    ++ H G+L + G KMSKS GN +  
Sbjct: 255 DVHLVGKEIVRFH----TIIWGCMLMALGLDLPKKVYGH-GWLIVNGAKMSKSVGNVVDP 309

Query: 289 NELLETKKFGGRSWPAPVIRLAML 312
             L+E        + A  IR  +L
Sbjct: 310 VALIE-------EFGADAIRYFLL 326


>gi|218903317|ref|YP_002451151.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
 gi|218534804|gb|ACK87202.1| isoleucyl-tRNA synthetase [Bacillus cereus AH820]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|94495661|ref|ZP_01302241.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
 gi|94425049|gb|EAT10070.1| valyl-tRNA synthetase [Sphingomonas sp. SKA58]
          Length = 972

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 40/103 (38%), Gaps = 14/103 (13%)

Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
           G GR G     S ++ HY     D+   G D++F        Q            +++H 
Sbjct: 568 GSGRTG----QSLLARHY---PNDLLISGFDILFFWDARMAMQGMEFMGDVPWRKLYLHG 620

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                +G+KMSKS GN +    L++        + A  +R  M
Sbjct: 621 LVRAADGQKMSKSKGNVVDPLGLIDR-------FGADALRFFM 656


>gi|332231893|ref|XP_003265129.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial [Nomascus
           leucogenys]
          Length = 1012

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 639 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 699 WVADSNVFTEVTIGPSVLNAARDDISKLRNT 729


>gi|283769125|ref|ZP_06342030.1| valine--tRNA ligase [Bulleidia extructa W1219]
 gi|283104311|gb|EFC05689.1| valine--tRNA ligase [Bulleidia extructa W1219]
          Length = 871

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 17/164 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            ++ P D   W++   +   W S   W     GW  E +     Y        G G D+I
Sbjct: 429 GQEAPQDIENWRQDEDVLDTWFSSALWPFSTLGWPKE-TEDFKRYYPNSM--MGTGYDII 485

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F        Q+          ++ +H    + +GRKMSKS GN I   E+++        
Sbjct: 486 FFWVARMAFQARHFTGQAPFKDVVLHGLIRDAKGRKMSKSLGNGIDPMEVID-------Q 538

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +    +R  +       P   + +  +++  A   ++K    S 
Sbjct: 539 YGVDALRYFLTTNS--TPGQDLRYIPEKVEAAWNFINKIWNASR 580


>gi|237742619|ref|ZP_04573100.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
 gi|229430267|gb|EEO40479.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
          Length = 859

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPA--------------------------VLSALYND--LN 360
           A   L++ W     +  ++  A                          V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSELVKNANDEIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVASSMNSEQAAKILG 748


>gi|225864163|ref|YP_002749541.1| isoleucyl-tRNA synthetase [Bacillus cereus 03BB102]
 gi|229184419|ref|ZP_04311626.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
 gi|225787752|gb|ACO27969.1| isoleucine--tRNA ligase [Bacillus cereus 03BB102]
 gi|228599215|gb|EEK56828.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|195337561|ref|XP_002035397.1| GM14681 [Drosophila sechellia]
 gi|194128490|gb|EDW50533.1| GM14681 [Drosophila sechellia]
          Length = 869

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 50/176 (28%), Gaps = 21/176 (11%)

Query: 18  FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           F   D S  + YV     Y     H+G+ R   + D + R  R     K V         
Sbjct: 55  FNPKD-SKDKYYVLSMFPYPSGNLHMGHVRVYTIADSVARFQRMCG--KNVFQPMGWDSF 111

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
                  A Q           +  T +N  Q  +   RL C    +    T   P+    
Sbjct: 112 GLPAENAANQRGVE------PASWTEQNIAQMKEQLKRLGCSFDWNHELTTCS-PKYYKW 164

Query: 136 IQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
            Q     +  HG AY+    +              +  ++D      R   K  KK
Sbjct: 165 TQHLFLMLHRHGLAYQNEALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|190570564|ref|YP_001974922.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019189|ref|ZP_03334996.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190356836|emb|CAQ54205.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212995298|gb|EEB55939.1| valyl-tRNA synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 857

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 14/134 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PT+    HIG+       D + R  R     K V Y     D       + ++  +   +
Sbjct: 42  PTISGKLHIGHIFSYCHTDFIARFQRMLG--KDVFYPIGFDDNGLPTERLVEQTYKTRAK 99

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRATNHIP-QMIYLIQNIIL 141
           E       +    +  K+ Q+F +    +         +   +   +    +  I  +  
Sbjct: 100 EVGREEFIEMCHEVIEKSKQEFKELFKSVGISYDWNLEYHTISKEAVALSQMSFID-LYN 158

Query: 142 HGHAYEANNEIIFD 155
             +AY+    I++D
Sbjct: 159 KEYAYKKMQPILWD 172


>gi|49477540|ref|YP_036324.1| isoleucyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|81396231|sp|Q6HJF2|SYI2_BACHK RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|49329096|gb|AAT59742.1| isoleucine--tRNA ligase (isoleucyl-tRNA synthetase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|319941944|ref|ZP_08016265.1| isoleucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
 gi|319804597|gb|EFW01467.1| isoleucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
          Length = 956

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
           D       +  H   ++ +G KMSKS GN +   E+          + A ++RL +  T 
Sbjct: 611 DGRPPYNQLLTHGFCVDEKGEKMSKSKGNVVRPQEI-------NDKYGAEILRLWVASTD 663

Query: 316 YREPIDFTVQRLTEAEILLSKWPQT 340
           Y   +      +        +   T
Sbjct: 664 YSGELRLGPTIINRVVESYRRIRNT 688


>gi|319784275|ref|YP_004143751.1| isoleucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317170163|gb|ADV13701.1| isoleucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 987

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 65/189 (34%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +GRKMSKS GN +   ++
Sbjct: 611 DVYLEGSDQHRGWFHSSLLESCGTRGRAPYDTVVTHGFTMDEDGRKMSKSLGNTVVPQDV 670

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           +       +   A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 671 I-------KQSGADILRLWVVTTDY-----WEDQRLGKNVLQTNIDAYRKLRNTIRWMLG 718

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +   L  +                +  L ++ R      +   I       + 
Sbjct: 719 TLAHDDGEEVPLEKM------PELERLMLHRLAELDEVVRSGYDAFEFKRITRMLLDFMV 772

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 773 VELSAFYFD 781


>gi|229007362|ref|ZP_04164960.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
 gi|228753893|gb|EEM03333.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
          Length = 545

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 37/109 (33%), Gaps = 11/109 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R     + V YV         I  RA+QE            I
Sbjct: 18  HLGHVAGLLPGDILARYYRTKG--ENVLYVSGSDCNGTPIAIRAKQE------GVTAKEI 69

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHAY 146
                ++F +    L         R  A +H   +  +   ++  G  Y
Sbjct: 70  ADYYHEEFERCFKELGFTY-DCYTRTDAQHHHETVQKIFLRLLEEGFIY 117


>gi|229091176|ref|ZP_04222399.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
 gi|228692307|gb|EEL46043.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|239623481|ref|ZP_04666512.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521512|gb|EEQ61378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 627

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 6/91 (6%)

Query: 76  DDKIIERARQEHPSIPINDA-----ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
           D+   ERA Q    +    A        I S + +   K+ + L           ++  P
Sbjct: 250 DEAFKERAHQATLKLQKGYAPFRAIWQHIMSVSVEDLKKNYSNLNVE-FDLWKGESDAEP 308

Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
            +  +IQ ++  G AYE+   ++ D +   +
Sbjct: 309 YIADMIQMLVDKGLAYESQGALVVDVAEETD 339


>gi|217964301|ref|YP_002349979.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217333571|gb|ACK39365.1| valyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307571133|emb|CAR84312.1| valyl-tRNA synthetase [Listeria monocytogenes L99]
          Length = 884

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 487 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 544

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 545 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 587


>gi|196040256|ref|ZP_03107557.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
 gi|196028741|gb|EDX67347.1| lysine--tRNA ligase [Bacillus cereus NVH0597-99]
          Length = 517

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 35/112 (31%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPINDAIS-IITSKNTQQFVKDTTRLACL 117
             R +  +ID   ++     +  IP              ++F K        
Sbjct: 69  RFRKVPKNIDPSFVKYIGMPYCDIPDPYGCHNSYAEHFEKEFEKLLQAFGIE 120


>gi|157964837|ref|YP_001499661.1| valyl-tRNA synthetase [Rickettsia massiliae MTU5]
 gi|157844613|gb|ABV85114.1| Valyl-tRNA synthetase [Rickettsia massiliae MTU5]
          Length = 841

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 22/118 (18%)

Query: 239 DLIFPHH----ENEIAQSCCAD---------RIEKTANIWIHNGF-LNLEGRKMSKSNGN 284
           D +FP H     +EI ++                   NI + +G+ L  +  KMSKS GN
Sbjct: 514 DKLFPMHLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNI-MVSGWCLAEDRSKMSKSKGN 572

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +   +LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 573 VLVPEKLLE-------QYGSDVIRYWSANSKLGADTAYSEDIMKNGKRLVNKLWNAAK 623


>gi|75911132|ref|YP_325428.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
 gi|123731296|sp|Q3M3A3|SYL_ANAVT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|75704857|gb|ABA24533.1| leucyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
          Length = 872

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 40/138 (28%), Gaps = 15/138 (10%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
           +  + Y      Y     H+G+ R   + DV+ RL R       V +             
Sbjct: 31  NKPKFYALSMFPYPSGSLHMGHVRNYTITDVIARLKRMQGY--RVLHPMGWDAFGLPAEN 88

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---- 137
            A      I      +  T +N  Q  +   RL  L+           P      Q    
Sbjct: 89  AA------IDRGVPPANWTYQNITQMRQQLQRLG-LSIDWDSEVATCSPDYYKWTQWIFL 141

Query: 138 NIILHGHAYEANNEIIFD 155
             +  G AY+    + +D
Sbjct: 142 QFLQAGLAYQKEAAVNWD 159


>gi|15605834|ref|NP_213211.1| isoleucyl-tRNA synthetase [Aquifex aeolicus VF5]
 gi|6226181|sp|O66651|SYI_AQUAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|2983002|gb|AAC06614.1| isoleucyl-tRNA synthetase [Aquifex aeolicus VF5]
          Length = 956

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 44/142 (30%), Gaps = 22/142 (15%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA------ 83
           GP  Y     H+G+A   I+ DV+ +        K V ++    D     IERA      
Sbjct: 58  GP-PYANGHIHVGHALNKILKDVINKY--NLLIGKNVNFIPGW-DCHGLPIERAVEKELS 113

Query: 84  -----RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIY 134
                ++  P     +       K      +D  RL  L     P  T        ++  
Sbjct: 114 KKKIKKESLPKTEFRELCREYAKKYVNIQREDFVRLGVLGDWEHPYLTMDPKYEAQEIRE 173

Query: 135 LIQNIILHGHAYEANNEIIFDT 156
           L       G AY +   + +  
Sbjct: 174 L-GKFFERGLAYRSKKPVYWCI 194


>gi|290893953|ref|ZP_06556929.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290556491|gb|EFD90029.1| valyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 883

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I QS          +  IH    + EGRKMSKS GN +   E+++  
Sbjct: 486 TGYDIIFFWVSRMIFQSVEFTGERPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVID-- 543

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + F+ +++      ++K    S 
Sbjct: 544 -----KYGADSLRYTLATGS--SPGQDLKFSYEKVESTWNFINKIWNASR 586


>gi|78046997|ref|YP_363172.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|123757531|sp|Q3BVP1|SYM_XANC5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78035427|emb|CAJ23072.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 694

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|161501798|ref|NP_761825.2| methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
 gi|61216347|sp|Q8D8F2|SYM_VIBVU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|319999503|gb|AAO11352.2| Methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
          Length = 690

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/166 (15%), Positives = 53/166 (31%), Gaps = 32/166 (19%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                K  N+++H G++ + G KMSKS G F+  +  LE             +R      
Sbjct: 316 GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLE-------HLDPECLRYY---- 363

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQ-------------TSTSKGIIDPAVLSALYNDLNT 361
            Y   ++    R+ + ++ L  + Q              S + G I       L  +   
Sbjct: 364 -YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVE 419

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
                  ++    + +  +L         I  +    +  N+ +  
Sbjct: 420 PELY---NEFVAAADRIAELYEAREFGRAIRELTALADKANQYVDE 462


>gi|45358574|ref|NP_988131.1| glutamyl-tRNA synthetase [Methanococcus maripaludis S2]
 gi|67461774|sp|Q6LYI0|SYE_METMP RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|44921332|emb|CAF30567.1| Glutamyl-tRNA synthetase [Methanococcus maripaludis S2]
          Length = 555

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 30/141 (21%)

Query: 10  TLERKIT-EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           T  ++   E + +  + +  +   P      HIG+AR  ++ D       ++  +     
Sbjct: 78  TERKRKEIELKNVKGNVVMRFA--PNPSGPLHIGHARASVLND-------FFSKKYNGKL 128

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V  + D D      A++  P             +  Q   +D   L         + +  
Sbjct: 129 VLRLEDTD------AKRVLPE----------AYEMIQ---EDLKWLGVKVDEVIVQ-SER 168

Query: 129 IPQMIYLIQNIILHGHAYEAN 149
           +       + +I  GHAY  +
Sbjct: 169 LETYYEYGRKLIEMGHAYVCD 189


>gi|159903438|ref|YP_001550782.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
 gi|159888614|gb|ABX08828.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
          Length = 509

 Score = 39.1 bits (90), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 9/81 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D++  H     A    A  +E    ++ H GFL  EG+KM KS GN +    LL
Sbjct: 255 VHVIGKDILRFHAIYWPAMLMSA-GLELPKKVFGH-GFLTREGQKMGKSLGNILDPELLL 312

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
           E        +    IR  +L 
Sbjct: 313 E-------QYGKDPIRWYLLS 326


>gi|325929563|ref|ZP_08190677.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118]
 gi|325540073|gb|EGD11701.1| methionyl-tRNA synthetase [Xanthomonas perforans 91-118]
          Length = 694

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|319744572|gb|EFV96925.1| isoleucine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTSDFN 663


>gi|315180776|gb|ADT87690.1| methionyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 376

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/171 (15%), Positives = 55/171 (32%), Gaps = 30/171 (17%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                K  N+++H G++ + G KMSKS G F+  +  L              +R      
Sbjct: 4   GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFVKASTYLN-------HLDPECLRYY---- 51

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQ-------------TSTSKGIIDPAVLSALYNDLNT 361
            Y   ++    R+ + ++ L  + Q              S + G I       L +    
Sbjct: 52  -YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFDGKLSDRFAE 107

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIEK 411
                     A    + ++      A   I  + +   +++++     + K
Sbjct: 108 PELYNEFVAAADRIAELYEAREFGRAIREITALADKANQYVDEKAPWVVAK 158


>gi|300868292|ref|ZP_07112921.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
 gi|300333727|emb|CBN58105.1| Isoleucyl-tRNA synthetase (modular protein) [Oscillatoria sp. PCC
           6506]
          Length = 1183

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 39/103 (37%), Gaps = 11/103 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + I     +  H   L+ +GRKMSKS GN +    ++         + A V+RL +
Sbjct: 615 SVANNGIAPYKTVLTHGFVLDEQGRKMSKSLGNVVDPAVVIN-------EYGADVLRLWV 667

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPA 350
               Y   +      L +   +  K   T+     +    DPA
Sbjct: 668 SSVDYSADVPLGKNILKQQADVYRKIRNTARFLLGNLHDFDPA 710


>gi|229087542|ref|ZP_04219674.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
 gi|228695789|gb|EEL48642.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
          Length = 544

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 41/124 (33%), Gaps = 13/124 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHVASLLPGDILARYYRAKG--EKVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLI-QNIILH 142
           QE            I     ++F +    L         R  T H  + +  I   ++  
Sbjct: 60  QE------GVTAKEIADHYHEEFQRCFQHLGFTY-DCYTRTDTQHHHETVQKIFLRLLEE 112

Query: 143 GHAY 146
              Y
Sbjct: 113 DFIY 116


>gi|219109559|ref|XP_002176534.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217411069|gb|EEC50997.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 1052

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 2/125 (1%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
            A S   L    D++  G D      ++ +  S   + I     +  H   L+ +G KMS
Sbjct: 611 VAQSRDELAYPADMYLEGSDQHRGWFQSSLLTSVANNNIAPYKTVLTHGFVLDEKGFKMS 670

Query: 280 KSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
           KS GN +   +++E      +  ++ A V+RL +  + Y   +      + +      K 
Sbjct: 671 KSLGNVVDPLKVIEGGNNKKQDPAYGADVLRLWVANSDYSGDVLIGDNIIKQTFDSYRKL 730

Query: 338 PQTST 342
             T+ 
Sbjct: 731 RNTAR 735


>gi|219846966|ref|YP_002461399.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
 gi|219541225|gb|ACL22963.1| valyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
          Length = 922

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +++H    +  GRKMSKS GN +   E++E        + +  +R  ++
Sbjct: 520 CYLTGQPPFHTVYLHGLVRDEHGRKMSKSFGNVVNPLEVVE-------QYGSDALRYTLV 572

Query: 313 MTHYREP---IDFTVQRLTEAEILLSKW 337
            +    P   ++   QR+  A    +K 
Sbjct: 573 TSG--TPGQDVNLNPQRIEAARNFANKI 598


>gi|22536664|ref|NP_687515.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76788204|ref|YP_329219.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77405574|ref|ZP_00782664.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
 gi|81454978|sp|Q8E177|SYI_STRA5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|84029569|sp|Q3K2N4|SYI_STRA1 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|22533504|gb|AAM99387.1|AE014214_1 isoleucyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
 gi|76563261|gb|ABA45845.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae A909]
 gi|77175796|gb|EAO78575.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae H36B]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTSDFN 663


>gi|325115167|emb|CBZ50723.1| arginyl-tRNAsynthetase, related [Neospora caninum Liverpool]
          Length = 594

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/193 (17%), Positives = 62/193 (32%), Gaps = 51/193 (26%)

Query: 13  RKITEFQ-AIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE------ 63
           R+    Q       +R+ V    P V    H+G+ R  I+ + + R+L ++  E      
Sbjct: 105 RQKGPLQLPHADKKLRVMVDFSSPNVAKEMHVGHLRSTIIGESICRILAFHGHEVQRINH 164

Query: 64  -----------------KCVTYVRNITDI----------------DDKIIERARQEHPSI 90
                            +   Y  N+ DI                DD    R+R+    +
Sbjct: 165 IGDWGTQFGMLIEYLHSQFPDYKANMPDISDLNAFYKKAKASFDADDGFKARSREMVVKL 224

Query: 91  PIND-----AISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGH 144
              D     +  +I   +  +F K   RL     T + R  + + P +  ++Q +   G 
Sbjct: 225 QGGDEAALESWRLICDVSRHEFEKVYKRLDV---TLEERGESYYNPAIPKVVQELTDKGM 281

Query: 145 AYEANNEIIFDTS 157
              ++      T 
Sbjct: 282 ITVSDGAKCVFTR 294


>gi|299740806|ref|XP_001834005.2| hypothetical protein CC1G_09419 [Coprinopsis cinerea okayama7#130]
 gi|298404419|gb|EAU87800.2| hypothetical protein CC1G_09419 [Coprinopsis cinerea okayama7#130]
          Length = 1349

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 59/159 (37%), Gaps = 12/159 (7%)

Query: 234  HGGGLDL-IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
            HG GLDL        E+ +S         +   I  G L +      + +G+   + + +
Sbjct: 962  HGSGLDLDRSIRLLQEVLESEATPSPSTASRANI-IGNLAMSFLVRFERHGSSSDLEDAI 1020

Query: 293  ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
               +          +R      H R  ++ ++  L EA  L+ +  + + +     P   
Sbjct: 1021 RLFQEAHGLDEVTHMRNFAAALHTRSQLNRSISDLEEAIKLIERVLEVTPAPRPERPNAL 1080

Query: 350  AVLSAL----YNDLNTVSAIQALHKLARESTKNHDLLPI 384
              L+A+    ++DL T   I  L +  R   +  +LLP 
Sbjct: 1081 ETLAAMLCSRWDDLGT---ISDLEEAIRLIQEALELLPT 1116


>gi|189240952|ref|XP_971597.2| PREDICTED: similar to methionine-tRNA synthetase [Tribolium
           castaneum]
          Length = 552

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 47/262 (17%), Positives = 84/262 (32%), Gaps = 82/262 (31%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
           A  ++   +I  H+ +  ++G KMSKS  N +               + +  +R  +L  
Sbjct: 299 AAGLDPPLSILCHSHW-TVDGEKMSKSKNNVVCP-------FQRSEIYSSDGLRYFLLRE 350

Query: 314 --THYREPIDFTV---------QRLTEAEILLSKWPQTSTSKGIIDPAVLS------ALY 356
              H     +++          +       LLS+   T+ +     P + +      A  
Sbjct: 351 GVAH--SDGNYSDTKVIRILNSELADTLGNLLSRCCGTALNPHQTFPKIEASAFESVASS 408

Query: 357 N---------------------DLNTVSA----IQALH------------KLARESTKNH 379
           +                     + N   A    I  LH            +L +ES K  
Sbjct: 409 DVTKKLIEDVATLPDVCMGHYSNFNFYKAVDRVIATLHQANLFFETFKPWELKKESAKTR 468

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA-----DY---I 431
           +L  + + +   L   VC   L   I      L+ +  +  + + FS A     D    +
Sbjct: 469 ELDVVLHLTLETL--RVCGILLQPIIPNIASNLLNKINVARERRTFSDAKILSWDDTNFV 526

Query: 432 RKQLES------KGFILE-DYK 446
           RK+L        K  +LE D K
Sbjct: 527 RKELAKDKTLLFKRIVLEGDRK 548


>gi|196033846|ref|ZP_03101257.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|228945806|ref|ZP_04108152.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|195993526|gb|EDX57483.1| isoleucyl-tRNA synthetase [Bacillus cereus W]
 gi|228813871|gb|EEM60146.1| Isoleucyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 1033

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|311070685|ref|YP_003975608.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310871202|gb|ADP34677.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 664

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 39/116 (33%), Gaps = 14/116 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A +E      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEEE------NITPQEY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      K   +L         R T    +++  I+ +         N +I  D
Sbjct: 74  VDRAAADIQKLWKQLEISNDDF-IRTTESRHKVV--IEKVFQKLF---DNGDIYLD 123


>gi|302526675|ref|ZP_07279017.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
 gi|302435570|gb|EFL07386.1| methionyl-tRNA synthetase [Streptomyces sp. AA4]
          Length = 359

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 39/140 (27%)

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE--PI- 320
           I++H  +L + G K+SKS GN +   +L++        + A  +R  +L    RE  P+ 
Sbjct: 167 IFVH-DYLTVYGAKISKSAGNTVRPTDLID-------QYGADAVRWWLL----REVAPLG 214

Query: 321 --DFTVQRLTE-AEILLS--------KWPQTSTSKGIIDPA------------VLSALYN 357
             DFT  RL   A+  L+        +    +   G I PA            + +AL  
Sbjct: 215 DTDFTEDRLIARADDELANGLGNLVHRVLSLARRTGRIVPAGPLRTVHSLADRIDAALA- 273

Query: 358 DLNTVSAIQALHKLARESTK 377
           D +  SA  AL ++  ++ +
Sbjct: 274 DFDFRSATGALVQVIADANR 293


>gi|283850590|ref|ZP_06367878.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
 gi|283574161|gb|EFC22133.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
          Length = 650

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 12/123 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A    V D L R   +    + V ++    +  DKI E A+          
Sbjct: 13  VNAKPHLGHAYTTTVADSLARF--HALLGEDVYFLTGTDEHGDKIAEAAKA------AGQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN-NE 151
                    +  F     RL    P+   R T  +H   +   +Q +   G  Y      
Sbjct: 65  TPKEYADAISGLFSSLWPRLGI-TPSRFIRTTDADHKEAVRRALQQVYDKGDIYFGEYGG 123

Query: 152 IIF 154
              
Sbjct: 124 HYC 126


>gi|238898868|ref|YP_002924550.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|259511559|sp|C4K759|SYM_HAMD5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|229466628|gb|ACQ68402.1| methionine tRNA synthetase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 545

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 12/85 (14%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    +D  + T N+++H G++ + G KMSKS G FI  ++ L 
Sbjct: 291 HFIGKDIVYFHSLFWPAVLEGSDFRKPT-NLFVH-GYITVNGAKMSKSRGTFIEASDYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTH 315
                 +      +R      L +H
Sbjct: 348 ------KHLDPDCLRYYYAAKLSSH 366


>gi|227499835|ref|ZP_03929928.1| leucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
 gi|227217944|gb|EEI83217.1| leucine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
          Length = 800

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 33/93 (35%), Gaps = 8/93 (8%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L  + +KMSKS GN I  ++++       R + A  +R   M M  +
Sbjct: 560 KEPYKKRTSHGMILGSDHQKMSKSRGNVINPDDII-------RDYGADTLRCYEMFMGDF 612

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
                ++ + +      L +        G  + 
Sbjct: 613 SSMAIWSDEGVRGCRKYLERVFNLKDLVGEGEE 645


>gi|167630790|ref|YP_001681289.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167593530|gb|ABZ85278.1| valyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 894

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/89 (24%), Positives = 37/89 (41%), Gaps = 12/89 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  ++IH   L+ +GRKMSKS GN +   E+++        + A  +R  ++  + 
Sbjct: 511 GDVPFREVFIHGLILDAQGRKMSKSLGNGVDPIEIID-------QYGADTLRFMLVTGN- 562

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST 342
             P   I F  +RL       +K    S 
Sbjct: 563 -TPGNDIRFHFERLEGIRNFANKIWNASR 590


>gi|77411442|ref|ZP_00787788.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
 gi|77162528|gb|EAO73493.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae CJB111]
          Length = 930

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTSDFN 663


>gi|113475475|ref|YP_721536.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
 gi|110166523|gb|ABG51063.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
          Length = 530

 Score = 39.1 bits (90), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 35/125 (28%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D L R  R          V  IT  D+      + +  +     
Sbjct: 20  VNDLPHIGSAYTTIAADTLARFQRLQG-----RSVLMITGTDEH---GQKIQRTAENKGR 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI--YLIQNIILHGHAYEANNEI 152
                     + F     +L         R T    + I     Q +      Y +  + 
Sbjct: 72  NPKEHCDSVVRGFESLWEQLNIQY-DRFIRTTAPNHEKIVKEFFQRVWEKEDIYLSQQKG 130

Query: 153 IFDTS 157
            +  S
Sbjct: 131 WYCVS 135



 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 14/96 (14%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H     A    AD       ++ H GFL  +G+KM KS  N +   
Sbjct: 262 PINLHLIGKDILRFHAVYWPAMLMSADLPLP-ERVFGH-GFLTKDGKKMGKSLNNTLDPF 319

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           EL+       + + +  +R   L     + I+F V 
Sbjct: 320 ELI-------QKYGSDAVRYYFL-----KEIEFGVD 343


>gi|229161182|ref|ZP_04289169.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus R309803]
 gi|228622278|gb|EEK79117.1| Isoleucyl-tRNA synthetase 2 [Bacillus cereus R309803]
          Length = 1033

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVN-------KFGADALRWALLVDSAPWNAKR-FSERTVLEAKS 639


>gi|258510439|ref|YP_003183873.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
 gi|257477165|gb|ACV57484.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
           acidocaldarius DSM 446]
          Length = 801

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/87 (17%), Positives = 35/87 (40%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++   G + L G KMSKS GN +  ++++         +    +R+  M +    
Sbjct: 559 EPFQRLFT-QGMITLNGAKMSKSKGNVVNPDDIIAR-------YGVDALRMYEMFVGPPE 610

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
           +  +++   L      L++  +    +
Sbjct: 611 DDAEWSTNGLEGVARFLARVYRLYAQQ 637


>gi|212537687|ref|XP_002148999.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
 gi|210068741|gb|EEA22832.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
           18224]
          Length = 583

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   M++ DV+ R  +   G     ++   TD     I++A QE        
Sbjct: 66  VNAAPHVGHLYSMVLGDVIKRW-QQLKGNTNAIFLTG-TDEHGIKIQQAAQE-----AGM 118

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                   N + F             H  R T+  H   + Y  +++   G+ Y   +E 
Sbjct: 119 DTQSFCDMNCKTFKDLARAAKISN-DHFIRTTDEAHKDAVRYFWESLQHRGYIYTKKHEG 177

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 178 WYSVSDEAFY 187


>gi|311694183|gb|ADP97056.1| methionyl-tRNA synthetase [marine bacterium HP15]
          Length = 676

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 34/117 (29%), Gaps = 14/117 (11%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      H+G+    I  D+  R  +     +   YV         I+ RA +E  
Sbjct: 19  YANGP-----IHLGHLLEYIQTDIWVRYQKMRG--QNCYYVCADDAHGTAIMLRAERE-- 69

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI-ILHGH 144
                     +  +  ++  +D      L   +    +         I      +GH
Sbjct: 70  ----GITSEQLIDRIREEHQEDFAGFHILFDNYYTTHSEENRYFSEYIYRQLQENGH 122



 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                  +W H GF+ + G+KMSKS G FI     L+             +R   
Sbjct: 315 GFRTPTAVWAH-GFVTVNGKKMSKSRGTFIMARTYLD-------HLNPEYLRYYF 361


>gi|299772089|ref|YP_003734115.1| isoleucyl-tRNA synthetase [Acinetobacter sp. DR1]
 gi|298702177|gb|ADI92742.1| isoleucyl-tRNA synthetase [Acinetobacter sp. DR1]
          Length = 945

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|302865243|ref|YP_003833880.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
 gi|302568102|gb|ADL44304.1| methionyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
          Length = 600

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 17/119 (14%)

Query: 29  YVCGPTVYDFAHIGNARPM-IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      HIG+     +  DV  R +R       V  V    +    I  +A  E 
Sbjct: 12  YANGPR-----HIGHVSGFGVPSDVFSRYMRMAG--HDVLMVSGTDEHGTPIQVQADAE- 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGH 144
                      +  +  +   +D   L  L+     R T  NH   +  L   +  +G+
Sbjct: 64  -----GVTPRELADRYNRVIAEDLRALG-LSYDLFTRTTTRNHYAVVQELFTGLHRNGY 116


>gi|284990567|ref|YP_003409121.1| ATPase AAA-2 domain-containing protein [Geodermatophilus obscurus
           DSM 43160]
 gi|284063812|gb|ADB74750.1| ATPase AAA-2 domain protein [Geodermatophilus obscurus DSM 43160]
          Length = 847

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%)

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
            +   +E+L +E+   +  +++  A  +R QL      LE  ++      +
Sbjct: 448 GLEQEVERLQREKDQAVAAEQYERASELRDQLAEAQARLEQARSGGGQPGV 498


>gi|169632048|ref|YP_001705784.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169150840|emb|CAO99443.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 945

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 13/113 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALY-NDL 359
             + YR  I  + +  +       +   T      +   + P+   AL  +DL
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNTLRFLLANLNGLKPS-TDALAVDDL 693


>gi|114319561|ref|YP_741244.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312502|sp|Q0ABN3|SYL_ALHEH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114225955|gb|ABI55754.1| leucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 864

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 40/152 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    L++        + A  +RL  M      + ++++   +  A   L
Sbjct: 620 EKMSKSKNNGVDPQALIDR-------YGADTVRLYTMFAAPPDQSLEWSDSAVEGAYRFL 672

Query: 335 SKWPQTST---SKGIIDPAVLSALYN---D---------------------LNTVSAIQA 367
            ++        + G +    +++L +   D                      NT  AI A
Sbjct: 673 RRYYGLVRDHVAAGPVPALDVASLDDAARDLRRKVHETIAKASDDVGRRYTFNT--AIAA 730

Query: 368 LHKLARESTKNHDLLPIFNASAHIL--GIEVC 397
           + +L     K     P   A+  +L  G+E  
Sbjct: 731 VMELCNALGKAAANEPS-GAARAVLQEGLEAA 761


>gi|77408400|ref|ZP_00785140.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
 gi|77414696|ref|ZP_00790829.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77159256|gb|EAO70434.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae 515]
 gi|77173003|gb|EAO76132.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae COH1]
          Length = 930

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILKQTSETYRKIRNTLR--------FLIANTSDFN 663


>gi|315301039|ref|ZP_07872357.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
 gi|313630592|gb|EFR98407.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
          Length = 664

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +  + F +   +L     T   R T   H   +  + + ++  G  Y    E  +  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVAKIFEQLVEQGDIYLGEYEGWYSV 132

Query: 157 S 157
           S
Sbjct: 133 S 133


>gi|291563752|emb|CBL42568.1| valyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
          Length = 883

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 71/185 (38%), Gaps = 19/185 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E   M   Y     D+   G D+IF      +              + IH    + 
Sbjct: 468 GWPKETDEMKYFY---PTDVLVTGYDIIFFWVIRMVFSGLEQTGECPFNTVLIHGLVRDS 524

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEA 330
           +GRKMSKS GN I   E+++        + A  +R+ ++  +   P   + F  +R+  +
Sbjct: 525 QGRKMSKSLGNGIDPLEVID-------KYGADALRMTLMTGN--APGNDMRFYWERVEAS 575

Query: 331 EILLSK-WPQTSTSKGIIDPAVL-SALYNDLNTVSA--IQALHKLARESTKNHDLLPIFN 386
               +K W  +      I+ A    A   DL       +  ++ LA+E T+N D   +  
Sbjct: 576 RNFANKVWNASRFIMMNIEKAPAGEAKLTDLTAADKWILSKVNDLAKEVTENMDKYELGI 635

Query: 387 ASAHI 391
           A   +
Sbjct: 636 ALQKV 640


>gi|110834460|ref|YP_693319.1| methionyl-tRNA synthetase [Alcanivorax borkumensis SK2]
 gi|122959435|sp|Q0VP51|SYM_ALCBS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|110647571|emb|CAL17047.1| Methionyl-tRNA synthetase [Alcanivorax borkumensis SK2]
          Length = 686

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 41/100 (41%), Gaps = 24/100 (24%)

Query: 215 WHIECSAMSSHYLGKVFDI---HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
           W  E +A   H++GK  DI   HG    L +P      A    A   + TA I+ H GF+
Sbjct: 286 WGKESTAELYHFIGK--DIINFHG----LFWP------AMLDGAGLRKPTA-IYSH-GFV 331

Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            + G KMSKS G FI     L+             +R   
Sbjct: 332 TVNGAKMSKSRGTFIKARTYLD-------HLSPEYLRYYF 364


>gi|148251789|ref|YP_001236374.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
 gi|166230612|sp|A5E8H4|SYL_BRASB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146403962|gb|ABQ32468.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
          Length = 874

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 14/66 (21%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAE 331
            KMSKS  N +  ++++E       S+ A V R  ML      P D    ++ +R+  A 
Sbjct: 629 EKMSKSKKNTVDPDDIIE-------SYGADVARWFMLS---DSPPDRDVIWSDERVQGAA 678

Query: 332 ILLSKW 337
             + + 
Sbjct: 679 RFVQRL 684


>gi|331082707|ref|ZP_08331830.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330400326|gb|EGG79968.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 881

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 71/169 (42%), Gaps = 19/169 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +             ++ IH    + +GRKMSKS GN I   E+
Sbjct: 481 DVLVTGYDIIFFWVIRMVFSGLEQTGKTPFHHVLIHGLVRDSQGRKMSKSLGNGIDPLEV 540

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +RL ++  +   P   + F  +R+  +    +K W  +      +
Sbjct: 541 ID-------KYGADALRLTLMTGN--APGNDMRFYWERIEASRNFANKVWNASRFIMMNL 591

Query: 348 DPAVLSALYNDLNTVSA-----IQALHKLARESTKNHDLLPIFNASAHI 391
           + A +     DL T++      +  ++ LA+E+T+N D   +  A   +
Sbjct: 592 EKADIPK-NIDLQTLTGADKWILSKVNTLAKEATENLDKYELGIAVQKV 639


>gi|329724727|gb|EGG61233.1| valine--tRNA ligase [Staphylococcus epidermidis VCU144]
          Length = 876

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAAR 579


>gi|309776468|ref|ZP_07671454.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915859|gb|EFP61613.1| valine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 875

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 10/98 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    Y     D+   G D+IF        Q+          ++ IH    + 
Sbjct: 461 GWPQE-TADLKRYFPN--DVLVTGYDIIFFWVARMAFQTRYCMNSRPFKDVLIHGLVRDA 517

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +GRKMSKS GN I   +++              +R  +
Sbjct: 518 QGRKMSKSLGNGIDPMDVIAEHGV-------DALRFFL 548


>gi|262281444|ref|ZP_06059225.1| isoleucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
 gi|262257270|gb|EEY76007.1| isoleucyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
          Length = 945

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|240141004|ref|YP_002965484.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240010981|gb|ACS42207.1| methionyl-tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 522

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 23/176 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   T     T  D+  ++    +  +     
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFT-----TGTDEHGLK---IQQTASRAGV 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                      +F     RL C       R T   H      L + +  +G  Y A    
Sbjct: 72  TPRAFVDDMAGRFKAVADRLDCSY-DRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN-PADFI-----LWKRSTPMEP 202
            +       Y         E  +G     +  K + P +++     L++ S   EP
Sbjct: 131 WYSVRDEAYY------DEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEP 180


>gi|229552054|ref|ZP_04440779.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|229314571|gb|EEN80544.1| valine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
          Length = 901

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 24/120 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 517 IFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 569

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS 363
             ++  +  +P     F+ +++  A   ++K    S             + N  DL+T  
Sbjct: 570 WFLITGN--KPGQDTRFSYKQVEAAWNFINKIWNISRFV----------MMNLGDLDTPQ 617


>gi|239813441|ref|YP_002942351.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
 gi|259511553|sp|C5CJ85|SYL_VARPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|239800018|gb|ACS17085.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
          Length = 876

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 39/133 (29%), Gaps = 15/133 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           Y C    Y     H+G+ R   + D+L R LR       +          D     A  E
Sbjct: 36  YACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGYNVLMPMGW------DAFGLPA--E 87

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILH 142
           + ++      +  T +N          +  LA           P      Q     ++  
Sbjct: 88  NAALKNGVPPAKWTYENIDYMRGQLQAMG-LAIDWSREIATCDPSYYKWNQWLFLKMLEK 146

Query: 143 GHAYEANNEIIFD 155
           G AY     + +D
Sbjct: 147 GIAYRKTQVVNWD 159


>gi|213028156|ref|ZP_03342603.1| isoleucyl-tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhi str. 404ty]
          Length = 196

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 7/75 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S           +  H   ++ +GRKMSKS GN ++  +++           A ++RL 
Sbjct: 123 ISVAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLG-------ADILRLW 175

Query: 311 MLMTHYREPIDFTVQ 325
           +  T Y   +  + +
Sbjct: 176 VASTDYTGEMAVSDE 190


>gi|199597497|ref|ZP_03210926.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199591520|gb|EDY99597.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 880

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 24/120 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 496 IFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 548

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS 363
             ++  +  +P     F+ +++  A   ++K    S             + N  DL+T  
Sbjct: 549 WFLITGN--KPGQDTRFSYKQVEAAWNFINKIWNISRFV----------MMNLGDLDTPQ 596


>gi|154151263|ref|YP_001404881.1| valyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
 gi|153999815|gb|ABS56238.1| valyl-tRNA synthetase [Methanoregula boonei 6A8]
          Length = 864

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I +S      +    I ++   L  +G KMSKS GN I   +L+         + A  +R
Sbjct: 495 ILRSVALTGSKPWDQILVNGMVLGEDGFKMSKSRGNVIVPEDLVGR-------YGADALR 547

Query: 309 -LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSALYN 357
             A         I F+   +  A    +K    +         +GI + A ++AL +
Sbjct: 548 QWAATGAALGSDIMFSWNDVIAASRFQTKMWNIARFALIQLEKEGIDENAPITALAD 604


>gi|119944944|ref|YP_942624.1| leucyl-tRNA synthetase [Psychromonas ingrahamii 37]
 gi|166231632|sp|A1SU60|SYL_PSYIN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|119863548|gb|ABM03025.1| leucyl-tRNA synthetase [Psychromonas ingrahamii 37]
          Length = 859

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 54/150 (36%), Gaps = 38/150 (25%)

Query: 271 LNLEGR-KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLT 328
           +  +G  KMSKS  N +    +++        + A  +RL M+      + ++++   L 
Sbjct: 611 VIYDGMSKMSKSKNNGVDPQVMID-------KYGADSVRLFMMFAAPADQTLEWSDSALE 663

Query: 329 EAEILLSKWPQTS------TSKGIID---------------PAVLSALYND------LNT 361
            +   L +  + +       +   +D                  ++ + +D       NT
Sbjct: 664 GSLRFLKRLWKIAFDHLALGAVADLDLKSHTEAQKTLRRELHKTIAKVTDDIGRRQTFNT 723

Query: 362 VSA--IQALHKLARESTKNHDLLPIFNASA 389
             A  ++ ++KL + +TK      I   + 
Sbjct: 724 AIASVMELMNKLTKTATKTEQDRAILQEAL 753


>gi|27468257|ref|NP_764894.1| valyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
 gi|57867133|ref|YP_188802.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|282875919|ref|ZP_06284786.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|293366387|ref|ZP_06613066.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|81819377|sp|Q5HNN9|SYV_STAEQ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81843675|sp|Q8CS83|SYV_STAES RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|27315803|gb|AAO04938.1|AE016748_172 valine-tRNA ligase [Staphylococcus epidermidis ATCC 12228]
 gi|57637791|gb|AAW54579.1| valyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
 gi|281294944|gb|EFA87471.1| valine--tRNA ligase [Staphylococcus epidermidis SK135]
 gi|291319512|gb|EFE59879.1| valine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329733785|gb|EGG70111.1| valine--tRNA ligase [Staphylococcus epidermidis VCU045]
 gi|329737114|gb|EGG73368.1| valine--tRNA ligase [Staphylococcus epidermidis VCU028]
          Length = 876

 Score = 38.7 bits (89), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNAAR 579


>gi|260557771|ref|ZP_05829985.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|260408944|gb|EEX02248.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 752

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 396 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 448

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 449 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 477


>gi|259649574|dbj|BAI41736.1| valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 901

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 24/120 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 517 IFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 569

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS 363
             ++  +  +P     F+ +++  A   ++K    S             + N  DL+T  
Sbjct: 570 WFLITGN--KPGQDTRFSYKQVEAAWNFINKIWNISRFV----------MMNLGDLDTPQ 617


>gi|242279644|ref|YP_002991773.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
 gi|242122538|gb|ACS80234.1| methionyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
          Length = 646

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 13/129 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I+ D + R  +    E    ++    +  DKI++ A +         
Sbjct: 13  VNAKPHLGHAYTTILADSMNRFHKLLGDE--TFFLTGTDEHGDKIVQAAEK------GGQ 64

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--N 150
                  + +  F      L         R T   HI  +  ++Q +   G  Y      
Sbjct: 65  TPREYVDEISSLFSGLWPGLQIENDDF-IRTTQERHIKCVQEVLQKVYDKGDIYFGEYGG 123

Query: 151 EIIFDTSSI 159
              F     
Sbjct: 124 HYCFGCERF 132


>gi|182419097|ref|ZP_02950351.1| leucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669189|ref|ZP_04529171.1| leucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377052|gb|EDT74622.1| leucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237655076|gb|EEP52634.1| leucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 816

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 49/139 (35%), Gaps = 37/139 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ +E +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDEYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQTSTS-----------KGIIDPAVLS-------AL-----YND--- 358
             +      + +  +   S           K  +D A          A+       D   
Sbjct: 618 DGIKSVSKFIERIERILESCREVINSTENIKTTVDSAEKELNFWKHTAIKGVTEDTDKMQ 677

Query: 359 LNTVSAIQALHKLARESTK 377
            NT  AI  L +L     K
Sbjct: 678 FNT--AIARLMELTNALNK 694


>gi|146337356|ref|YP_001202404.1| leucyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
 gi|166230613|sp|A4YJS8|SYL_BRASO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146190162|emb|CAL74154.1| leucine tRNA synthetase [Bradyrhizobium sp. ORS278]
          Length = 874

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 14/66 (21%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAE 331
            KMSKS  N +  ++++E       S+ A V R  ML      P D    ++ +R+  A 
Sbjct: 629 EKMSKSKKNTVDPDDIIE-------SYGADVARWFMLS---DSPPDRDVIWSDERVQGAA 678

Query: 332 ILLSKW 337
             + + 
Sbjct: 679 RFVQRL 684


>gi|332852118|ref|ZP_08433945.1| methionine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332867516|ref|ZP_08437669.1| methionine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332729490|gb|EGJ60829.1| methionine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332733933|gb|EGJ65078.1| methionine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 690

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 292 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 348

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 349 ------QHLNPEYLRYYFAS 362


>gi|332031667|gb|EGI71121.1| Leucyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
          Length = 1091

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DLI  H    +         +          NG L L   KMSKS GNF+T
Sbjct: 572 PVDLRVSGKDLIQNHLTYFLYNHTAIWPNQPELWPQGIRANGHLLLNSVKMSKSEGNFLT 631

Query: 288 INELLETKKFGGRSWPAPVIRLAM 311
           + E +       + + A  +RL +
Sbjct: 632 LAEAI-------KKFSADGLRLCL 648


>gi|330722377|gb|EGH00228.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC2047]
          Length = 652

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +  H   ++  G KMSKS GN ++  ++            A ++RL +
Sbjct: 296 SMAINGCAPYKTVLTHGFVVDANGHKMSKSKGNVMSPQKVANDLG-------ADILRLWV 348

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T +   +  + + L  +     +   T+ 
Sbjct: 349 AATDFSGEMSVSDEILKRSADSYRRIRNTAR 379


>gi|315652483|ref|ZP_07905468.1| leucine--tRNA ligase [Eubacterium saburreum DSM 3986]
 gi|315485272|gb|EFU75669.1| leucine--tRNA ligase [Eubacterium saburreum DSM 3986]
          Length = 804

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 18/133 (13%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLN-LE 274
           M+  YL    D++ GG++    H       +     I      E    ++ + G +N  +
Sbjct: 520 MADKYL--PVDMYIGGVEHAVLHLLYSRFYTKFLHDIGVVDFDEPFTKLF-NQGMINGSD 576

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEIL 333
           G+KMSKS GN ++ ++L+       R +    +R+  + +       D+  + +      
Sbjct: 577 GQKMSKSKGNVVSPDDLV-------RDYGCDALRMYELFVGPPELDADWDDRGIEGVARF 629

Query: 334 LSKWPQTSTSKGI 346
           L+K+ +       
Sbjct: 630 LNKFYKLVMDNKD 642


>gi|307297022|ref|ZP_07576838.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306877548|gb|EFN08776.1| leucyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 838

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 25/143 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +  ++++         + A  +R  ML      P    + +T   +  + 
Sbjct: 613 EKMSKSKKNVVDPDDIIA-------QYGADAVRWFMLS---DSPPERDLPWTEAGIEGSW 662

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
             +++  +               L          + LH+      K+ + L    A A I
Sbjct: 663 RFINRLWRLFGEADKGAEGQDKTLD---------RKLHQTIDGVAKDIEALSFNKAVAKI 713

Query: 392 --LGIEVCKEHLNKNISIAIEKL 412
             L   V K   + + S AI  L
Sbjct: 714 YELTNAVEKAKPSASRSAAIRAL 736


>gi|242399898|ref|YP_002995323.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
 gi|259511659|sp|C5ZZZ3|SYR_THESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|242266292|gb|ACS90974.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
          Length = 644

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 5/62 (8%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  ++ D + R++R          V+N   IDD  ++ A+     + + +   
Sbjct: 139 PLHMGHARNAVLGDTVARIMRALGYNVE---VQNY--IDDLGVQFAQVLWGYLNMREEFE 193

Query: 98  II 99
            I
Sbjct: 194 SI 195


>gi|163853584|ref|YP_001641627.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163665189|gb|ABY32556.1| methionyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 522

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 23/176 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   T     T  D+  ++    +  +     
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFT-----TGTDEHGLK---IQQTASRAGV 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                      +F     RL C       R T   H      L + +  +G  Y A    
Sbjct: 72  TPRAFVDDMAGRFKAVADRLDCSY-DRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN-PADFI-----LWKRSTPMEP 202
            +       Y         E  +G     +  K + P +++     L++ S   EP
Sbjct: 131 WYSVRDEAYY------DEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEP 180


>gi|153207562|ref|ZP_01946245.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212217981|ref|YP_002304768.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
 gi|238064875|sp|B6J4V8|SYM_COXB1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120576530|gb|EAX33154.1| methionyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
 gi|212012243|gb|ACJ19623.1| methionyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
          Length = 546

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA I++H G+L + G+KMSKS G FIT +  L+
Sbjct: 291 HFVGKDIVYFHALFWPAMLSSAGFRLPTA-IYVH-GYLTVNGQKMSKSRGTFITAHHYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 349 -------HLSPEYLRYY 358


>gi|50120348|ref|YP_049515.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|68565978|sp|Q6D7B6|SYM_ERWCT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49610874|emb|CAG74319.1| methionyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 676

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/197 (18%), Positives = 71/197 (36%), Gaps = 20/197 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKAGTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------QHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I       L + L      +          + +       A   I+ + ++   ++++  
Sbjct: 400 ISKRFDGKLADKLADAELYKTFTDAGASIAEAYSSRESGRAIREIMALADIANRYVDEQA 459

Query: 406 SIAIEKLVQERLILLKM 422
              + K V+ R   L+ 
Sbjct: 460 PWVVAK-VEGRDADLQA 475


>gi|324501796|gb|ADY40796.1| Leucyl-tRNA synthetase [Ascaris suum]
          Length = 1180

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N +A     D  +        NG L L   KMSK  GNF
Sbjct: 668 PVDMRVSGKDLIQNHLTYFLFNHVAIWK--DHPQFWPRSIRANGHLLLNNEKMSKQTGNF 725

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ +       G + + A  +RL++
Sbjct: 726 LTLYD-------GIQKFSADGMRLSL 744


>gi|304438288|ref|ZP_07398229.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368654|gb|EFM22338.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 516

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G +++  H         C   A  ++    ++ H G+L + G KMSKS GN +  
Sbjct: 255 DVHLVGKEIVRFH----TIIWGCMLMALGLDLPKKVYGH-GWLIVNGAKMSKSVGNVVDP 309

Query: 289 NELLETKKFGGRSWPAPVIRLAML 312
             L+E        + A  IR  +L
Sbjct: 310 VALIE-------EFGADAIRYFLL 326


>gi|260551003|ref|ZP_05825208.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405951|gb|EEW99438.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 688

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|239501264|ref|ZP_04660574.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 687

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|184157057|ref|YP_001845396.1| methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|183208651|gb|ACC56049.1| Methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|322506956|gb|ADX02410.1| metG [Acinetobacter baumannii 1656-2]
 gi|323516823|gb|ADX91204.1| methionyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 687

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|169634155|ref|YP_001707891.1| methionyl-tRNA synthetase [Acinetobacter baumannii SDF]
 gi|169152947|emb|CAP01992.1| methionyl-tRNA synthetase [Acinetobacter baumannii]
          Length = 687

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|158256300|dbj|BAF84121.1| unnamed protein product [Homo sapiens]
          Length = 940

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 567 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 626

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 627 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 657


>gi|145591957|ref|YP_001153959.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
 gi|166232828|sp|A4WLP0|SYR_PYRAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|145283725|gb|ABP51307.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
          Length = 630

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 16/73 (21%)

Query: 269 GFLNLEGRKMSKSNGNFITINELL----ETKKFGGRSWPAPV------------IRLAML 312
             +NL G KMS   G +I+++E+L    E      +     +            +R A L
Sbjct: 432 EMVNLPGMKMSARRGRYISLDEILDEAAERSASLVKEKSPEIAGVIAEKVGVGSVRYAFL 491

Query: 313 MTHYREPIDFTVQ 325
            T  R+PI+F  +
Sbjct: 492 STSPRKPIEFRWE 504


>gi|126640836|ref|YP_001083820.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 669

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 271 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 327

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 328 ------QHLNPEYLRYYFAS 341


>gi|123965505|ref|YP_001010586.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
 gi|166229755|sp|A2BUL8|SYI_PROM5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|123199871|gb|ABM71479.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
          Length = 965

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN +  N ++           + A V+RL
Sbjct: 598 SVAVNNKPPYKKVLTHGFALDENGRKMSKSLGNVVDPNIIINGGSNQKIQPAYGADVLRL 657

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   T+ 
Sbjct: 658 WVSSVDYSVDVPIGSNILKQLSDVYRKVRNTAR 690


>gi|114325408|gb|AAH40376.2| IARS2 protein [Homo sapiens]
          Length = 957

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 584 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 643

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 644 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 674


>gi|46852147|ref|NP_060530.3| isoleucyl-tRNA synthetase, mitochondrial precursor [Homo sapiens]
 gi|94730583|sp|Q9NSE4|SYIM_HUMAN RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS; Flags:
           Precursor
 gi|33112162|gb|AAP94033.1| isoleucine tRNA synthetase [Homo sapiens]
 gi|119613711|gb|EAW93305.1| isoleucine-tRNA synthetase 2, mitochondrial [Homo sapiens]
 gi|187952611|gb|AAI37439.1| Isoleucyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 1012

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 639 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 699 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 729


>gi|45945660|gb|AAH10218.2| IARS2 protein [Homo sapiens]
          Length = 773

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 400 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 459

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 460 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 490


>gi|45946341|gb|AAH47880.3| IARS2 protein [Homo sapiens]
          Length = 889

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 516 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 575

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 576 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 606


>gi|7678804|dbj|BAA95147.1| mitochondrial isoleucine tRNA synthetase [Homo sapiens]
          Length = 993

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 620 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 679

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 680 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 710


>gi|120553871|ref|YP_958222.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8]
 gi|187647734|sp|A1TZ66|SYM_MARAV RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|120323720|gb|ABM18035.1| methionyl-tRNA synthetase [Marinobacter aquaeolei VT8]
          Length = 678

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 8/55 (14%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                  +W H GF+ + G+KMSKS G FI     L+             +R   
Sbjct: 315 GFRTPTAVWAH-GFVTVNGKKMSKSRGTFIMARTYLD-------HLDPEYLRYYF 361


>gi|332872632|ref|ZP_08440600.1| methionine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|332739161|gb|EGJ70020.1| methionine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 690

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 292 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 348

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 349 ------QHLNPEYLRYYFAS 362


>gi|327458758|gb|EGF05106.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1057]
          Length = 930

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|324990662|gb|EGC22598.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK353]
          Length = 930

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKHFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|311068064|ref|YP_003972987.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
 gi|310868581|gb|ADP32056.1| isoleucyl-tRNA synthetase [Bacillus atrophaeus 1942]
          Length = 920

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 41/137 (29%), Gaps = 11/137 (8%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDKIIERAR 84
           GP  Y     H+G+A   I+ D + R                T+   I     K  +  R
Sbjct: 55  GP-PYANGDIHMGHALNKILKDFIVRYKSMSGYNAPYVPGWDTHGLPIETALTKNKKVKR 113

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIIL 141
           +E               +  +   +   RL        P  T    +  Q I +   +  
Sbjct: 114 KEMSVAEFRKLCEEYAWQQIEGQREQFKRLGVRGDWENPYVTLKPEYEAQQIRVFGEMAK 173

Query: 142 HGHAYEANNEIIFDTSS 158
            G+ Y+    + +  SS
Sbjct: 174 RGYIYKGLKPVNWSPSS 190



 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 AVAVTGQAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 SSVDYQADVRVSDAILKQVAEVYRKIRNT 650


>gi|309791315|ref|ZP_07685838.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
 gi|308226625|gb|EFO80330.1| valyl-tRNA synthetase [Oscillochloris trichoides DG6]
          Length = 905

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 12/105 (11%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      +   C     E    I++H    +  GRKMSKS GN +   E+++ +
Sbjct: 505 TGYDIIFFWVARMMMLGCYLTGTEPFHTIYLHGLVRDEHGRKMSKSYGNVVNPLEVMDAQ 564

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKW 337
                      +R  +  +    P   ++   QR+  A    +K 
Sbjct: 565 GT-------DALRYTLATSG--TPGQDLNLNPQRIEAARNFANKI 600


>gi|315501788|ref|YP_004080675.1| methionyl-tRNA synthetase [Micromonospora sp. L5]
 gi|315408407|gb|ADU06524.1| methionyl-tRNA synthetase [Micromonospora sp. L5]
          Length = 600

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 38/119 (31%), Gaps = 17/119 (14%)

Query: 29  YVCGPTVYDFAHIGNARPM-IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
           Y  GP      HIG+     +  DV  R +R       V  V    +    I  +A  E 
Sbjct: 12  YANGPR-----HIGHVSGFGVPSDVFSRYMRMAG--HDVLMVSGTDEHGTPIQVQADAE- 63

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGH 144
                      +  +  +   +D   L  L+     R T  NH   +  L   +  +G+
Sbjct: 64  -----GVTPRELADRYNRVIAEDLRALG-LSYDLFTRTTTRNHYAVVQELFTGLHRNGY 116


>gi|260553015|ref|ZP_05825930.1| isoleucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
 gi|260405257|gb|EEW98754.1| isoleucyl-tRNA synthetase [Acinetobacter sp. RUH2624]
          Length = 945

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|258539468|ref|YP_003173967.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|257151144|emb|CAR90116.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 880

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 24/120 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 496 IFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 548

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS 363
             ++  +  +P     F+ +++  A   ++K    S             + N  DL+T  
Sbjct: 549 WFLITGN--KPGQDTRFSYKQVEAAWNFINKIWNISRFV----------MMNLGDLDTPQ 596


>gi|193076558|gb|ABO11218.2| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 687

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|90101527|sp|P36420|SYV_LACCA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
          Length = 883

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 24/120 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 499 IFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 551

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS 363
             ++  +  +P     F+ +++  A   ++K    S             + N  DL+T  
Sbjct: 552 WFLITGN--KPGQDTRFSYKQVEAAWNFINKIWNISRFV----------MMNLGDLDTPQ 599


>gi|15679444|ref|NP_276561.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|3334359|sp|O27496|SYR_METTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|2622560|gb|AAB85922.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
           str. Delta H]
          Length = 560

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  I+ D L R+LR    +    Y  N
Sbjct: 124 PNGPLHIGHIRNAIIGDSLARILRMAGYDVETQYYVN 160


>gi|332362885|gb|EGJ40678.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK49]
          Length = 930

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|323516108|gb|ADX90489.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
          Length = 945

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KHLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|301633567|gb|ADK87121.1| leucine--tRNA ligase [Mycoplasma pneumoniae FH]
          Length = 793

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 63/186 (33%), Gaps = 24/186 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLN-LEGR 276
             YL    D++ GG +    H          + Q       E    + I+ G +   +G+
Sbjct: 512 ERYL--PVDLYVGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPFKKL-INQGMVLGPDGK 568

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS GN I    L+++         A  +RL ++ M      + +    L      L 
Sbjct: 569 KMSKSKGNTINPTPLIDSHG-------ADALRLYLMFMGPISAALTWLDDGLNGMRRWLD 621

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           +       + II   V      D  TV       K + E  +  +L  + +     L + 
Sbjct: 622 RVHNFFHKENIIKETV------DQETVYGYNLFLKRSYEHLEKQELNLVISQMMIFLNLL 675

Query: 396 VCKEHL 401
              + L
Sbjct: 676 YKTKQL 681


>gi|298241842|ref|ZP_06965649.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297554896|gb|EFH88760.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 818

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 30/89 (33%), Gaps = 9/89 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID-------DKIIERARQ 85
           PTV    HIG+       DV+ R  R     + V Y     D         +K I+R   
Sbjct: 44  PTVSGELHIGHCYSYTQADVIARFHRMLG--ERVLYPMGFDDNGLPTERYVEKTIKRKAL 101

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRL 114
           E       +    +  +  ++F     RL
Sbjct: 102 EMELPEFLEQCHTLIRQTEERFETLWRRL 130


>gi|258508256|ref|YP_003171007.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
 gi|257148183|emb|CAR87156.1| Valyl-tRNA synthetase [Lactobacillus rhamnosus GG]
          Length = 880

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 24/120 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 496 IFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 548

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS 363
             ++  +  +P     F+ +++  A   ++K    S             + N  DL+T  
Sbjct: 549 WFLITGN--KPGQDTRFSYKQVEAAWNFINKIWNISRFV----------MMNLGDLDTPQ 596


>gi|169797030|ref|YP_001714823.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213156565|ref|YP_002318226.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215484490|ref|YP_002326725.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
           [Acinetobacter baumannii AB307-0294]
 gi|260555678|ref|ZP_05827898.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
 gi|301347637|ref|ZP_07228378.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301513326|ref|ZP_07238563.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301595850|ref|ZP_07240858.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|169149957|emb|CAM87851.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213055725|gb|ACJ40627.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213987234|gb|ACJ57533.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
           [Acinetobacter baumannii AB307-0294]
 gi|260410589|gb|EEX03887.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
          Length = 687

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|125717516|ref|YP_001034649.1| isoleucyl-tRNA synthetase [Streptococcus sanguinis SK36]
 gi|166229774|sp|A3CLP4|SYI_STRSV RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|125497433|gb|ABN44099.1| Isoleucyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
          Length = 930

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|409360|gb|AAA57558.1| valyl-tRNA synthetase [Lactobacillus casei]
          Length = 901

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 45/120 (37%), Gaps = 24/120 (20%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q              IH    + +GRKMSKS GN I   +++E        + A  +R
Sbjct: 517 IFQGLHFTHQRPFQYTLIHGLMRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALR 569

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVS 363
             ++  +  +P     F+ +++  A   ++K    S             + N  DL+T  
Sbjct: 570 WFLITGN--KPGQDTRFSYKQVEAAWNFINKIWNISRFV----------MMNLGDLDTPQ 617


>gi|89092047|ref|ZP_01165002.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
 gi|89083782|gb|EAR62999.1| Leucyl-tRNA synthetase [Oceanospirillum sp. MED92]
          Length = 863

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 26/184 (14%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
           +  +F  +      M+   P      H+G+ R   + DV+ R  R     K V       
Sbjct: 31  QKEKFYCL-----SMF---PYPSGRLHMGHVRNYTIGDVVSRYQRMQG--KNVLQPMGWD 80

Query: 74  DIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
                    A      +  N A +  T +N         ++      ++  AT H P+  
Sbjct: 81  AFGLPAENAA------MKNNVAPAKWTYENIDYMRNQLEQMGFGYDWNRELATCH-PEYY 133

Query: 134 YLIQ----NIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
              Q     ++  G  Y+   E+              +  ++ + +          KK P
Sbjct: 134 RWEQWFFTKLMDKGLVYKKEAEVNWDPVDQT----VLANEQVIDGRGWRSGALVERKKIP 189

Query: 189 ADFI 192
             F+
Sbjct: 190 QWFL 193



 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 51/153 (33%), Gaps = 43/153 (28%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQ 325
           H+G       KMSKS  N I    +++        + A  +RL M+      + ++++  
Sbjct: 616 HDGM-----SKMSKSKNNGIDPQVMID-------KYGADTVRLFMMFAAPPEQSLEWSDS 663

Query: 326 RLTEAEILLSK-WPQ------------TSTSKGIID---------PAVLSALYND----- 358
            +  A+  L + W Q                  + D            +  + +D     
Sbjct: 664 GVEGAQRFLKRMWKQVFDHLNVGGSSVAIDKDNLTDVQKELRLKVHQTIQKVSDDIERRQ 723

Query: 359 -LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
             NT  AI A+ +L+    K  D+     A   
Sbjct: 724 TFNT--AIAAVMELSNTIAKFVDISEQGRAVMQ 754


>gi|323352732|ref|ZP_08087702.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
 gi|322121768|gb|EFX93514.1| isoleucine--tRNA ligase [Streptococcus sanguinis VMC66]
          Length = 930

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|332855723|ref|ZP_08436019.1| isoleucine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332866678|ref|ZP_08437140.1| isoleucine--tRNA ligase [Acinetobacter baumannii 6013113]
 gi|332727309|gb|EGJ58749.1| isoleucine--tRNA ligase [Acinetobacter baumannii 6013150]
 gi|332734447|gb|EGJ65562.1| isoleucine--tRNA ligase [Acinetobacter baumannii 6013113]
          Length = 945

 Score = 38.7 bits (89), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|332363501|gb|EGJ41283.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK355]
          Length = 930

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|332873532|ref|ZP_08441481.1| isoleucine--tRNA ligase [Acinetobacter baumannii 6014059]
 gi|322506232|gb|ADX01686.1| Isoleucyl-tRNA synthetase [Acinetobacter baumannii 1656-2]
 gi|332738229|gb|EGJ69107.1| isoleucine--tRNA ligase [Acinetobacter baumannii 6014059]
          Length = 945

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|289621231|emb|CBI52014.1| unnamed protein product [Sordaria macrospora]
          Length = 620

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 16/100 (16%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW------------ 302
           A  +     +  H   L+  G+KMSKS GN I+ +++++                     
Sbjct: 249 AVGLSPFKTLITHGFTLDKAGKKMSKSLGNIISADQVMDGSLLPPLKVKNKNRDPNVPPP 308

Query: 303 ----PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
                   +RL +  + Y   I      L      L+K+ 
Sbjct: 309 RDALGPDALRLWVASSDYTSDIVLGEPVLKTIHQSLTKYR 348


>gi|239503748|ref|ZP_04663058.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB900]
          Length = 945

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|193075938|gb|ABO10517.2| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 945

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|169797772|ref|YP_001715565.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213155430|ref|YP_002317475.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|215485121|ref|YP_002327362.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
 gi|301347569|ref|ZP_07228310.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB056]
 gi|301510772|ref|ZP_07236009.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB058]
 gi|301596562|ref|ZP_07241570.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB059]
 gi|169150699|emb|CAM88609.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AYE]
 gi|213054590|gb|ACJ39492.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB0057]
 gi|213986634|gb|ACJ56933.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
          Length = 945

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|163839798|ref|YP_001624203.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
 gi|162953274|gb|ABY22789.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
          Length = 529

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 16/100 (16%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G D+   H     A                  + +GFL   G KMSKS GN +  
Sbjct: 262 DVHIIGKDISRFH-----AIFWPGFLMSAGLPLPKRVMIHGFLFNNGVKMSKSFGNVVAP 316

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
            + +        ++    +R   L    Y +  +++ + +
Sbjct: 317 ADWVA-------AYGVDAVRFFFLREVSYGQDGNYSHEAI 349


>gi|7022287|dbj|BAA91544.1| unnamed protein product [Homo sapiens]
          Length = 764

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 37/91 (40%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I  + ++   +   +   + A V+R 
Sbjct: 498 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRW 557

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 558 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 588


>gi|116753536|ref|YP_842654.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
 gi|121694355|sp|A0B5P0|SYR_METTP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|116664987|gb|ABK14014.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
          Length = 558

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 24/79 (30%), Gaps = 4/79 (5%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-QEHPSIPIN 93
                H+G+ R  ++ D + R+LR         Y  N  D+  +        +H  +  +
Sbjct: 121 PDGPLHVGHIRNSVIGDTIVRILRRAGYNVEAQYYVN--DMGRQTAMVVWGCDHLDLDDS 178

Query: 94  DAISIITSKNTQQFVKDTT 112
                I         K   
Sbjct: 179 KPDHAIARVYIAA-HKIMN 196


>gi|332815071|ref|XP_516010.3| PREDICTED: methionyl-tRNA synthetase, mitochondrial [Pan
           troglodytes]
          Length = 613

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 346 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 395


>gi|324114469|gb|EGC08438.1| methionyl-tRNA synthetase [Escherichia fergusonii B253]
          Length = 677

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 74/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 292 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 349

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 350 -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 400

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L ++L      +     A E  +  +      A   I+ + ++   ++++  
Sbjct: 401 INKRFDGVLASELADPQLYKTFTDAAEEIGEAWESREFGKAVREIMALADLANRYVDEQA 460

Query: 406 SIAIEK 411
              + K
Sbjct: 461 PWVVAK 466


>gi|297264625|ref|XP_001086799.2| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1
           [Macaca mulatta]
          Length = 593

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 326 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 375


>gi|254496016|ref|ZP_05108919.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354765|gb|EET13397.1| methionyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 566

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    +D    TA     +GFL ++G+KMSKS G F+     LE
Sbjct: 302 HFVGKDIVYFHALFWPAMLAASDHRLPTAVY--THGFLTVDGQKMSKSRGTFLEARTYLE 359

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 360 -------HLNPEYLRYY 369


>gi|242003968|ref|XP_002422927.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212505820|gb|EEB10189.1| leucyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 841

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 29/102 (28%), Gaps = 12/102 (11%)

Query: 17  EFQAIDPS--NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
           +F  ID +    + YV     Y     H+G+ R   + DVL R  R     K V +    
Sbjct: 53  DFSRIDENNDKEKFYVLSMFPYPSGSLHMGHVRVYSISDVLARFFRMRG--KNVIHPMGW 110

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
                     A                T +N         +L
Sbjct: 111 DAFGLPAENAA------FEKGINPDEWTQQNIANMKSVMEKL 146


>gi|254460912|ref|ZP_05074328.1| leucyl-tRNA synthetase [Rhodobacterales bacterium HTCC2083]
 gi|206677501|gb|EDZ41988.1| leucyl-tRNA synthetase [Rhodobacteraceae bacterium HTCC2083]
          Length = 853

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 42/153 (27%), Gaps = 16/153 (10%)

Query: 8   YNTLERKITEFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
           +NT      E    D S  + YV    P      H+G+ R   + DV+ R          
Sbjct: 17  WNTANTFKAE---RDESKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARY--KMSTGHN 71

Query: 66  VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
           V +              A                T  N     +    L       +  A
Sbjct: 72  VLHPMGWDAFGMPAENAAMAIGGH------PKDWTYSNIADMREQMKPLGLSIDWSREFA 125

Query: 126 T---NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           T   ++  Q   L  + +  G  Y  N  + +D
Sbjct: 126 TCDVDYYGQQQALFLDFLDEGLVYRKNAVVNWD 158


>gi|126640135|ref|YP_001083119.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 920

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 564 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 616

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 617 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 645


>gi|116252220|ref|YP_768058.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115256868|emb|CAK07962.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 516

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 9/89 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     K V ++    +   K+ + AR E            
Sbjct: 20  PHIGHAYELIATDAMARYQRLDG--KDVFFLTGTDEHGQKMQQTARAE------GITAQA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +N+ +F +    L   +     R T 
Sbjct: 72  LADRNSGEF-QAMATLLNASNDDFIRTTQ 99


>gi|186681922|ref|YP_001865118.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
 gi|254782424|sp|B2IZP5|SYI_NOSP7 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|186464374|gb|ACC80175.1| isoleucyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
          Length = 959

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 6/125 (4%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI+  G D      ++ +  S   + I     +  H   L+ +GRKMSKS GN +  N +
Sbjct: 567 DIYLEGSDQHRGWFQSSLLTSVAVNDIAPYKTVLTHGFALDEQGRKMSKSEGNVVDPNTI 626

Query: 292 LETKKFG--GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----SKG 345
           +E  K      ++ A V+RL +    Y   +      + +   +  K   T+     S  
Sbjct: 627 IEGGKNQKVEPAYGADVLRLWVSSVDYSGDVRIGKNIIKQMNDVRGKIRNTARFLLGSLD 686

Query: 346 IIDPA 350
             DP 
Sbjct: 687 DFDPE 691


>gi|320529744|ref|ZP_08030822.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137983|gb|EFW29887.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 514

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G +++  H         C   A  +     ++ H G+L ++G KMSKS GN +  
Sbjct: 255 DVHLVGKEIVRFH----TIIWGCMLMALGLALPKKVYGH-GWLIVDGAKMSKSVGNVVDP 309

Query: 289 NELLETKKFGGRSWPAPVIRLAML 312
             L+E        + A  IR  +L
Sbjct: 310 IALIE-------EFGADAIRYFLL 326


>gi|304438334|ref|ZP_07398275.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
 gi|304368700|gb|EFM22384.1| valine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
          Length = 887

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   +++IH    + EGRKMSKS GN I   E++E        + A  +R  ++  
Sbjct: 507 FGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIE-------KYGADTLRFMLITG 559

Query: 315 HYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +   P   + F  +R+  A    +K    S 
Sbjct: 560 N--TPGNDMRFYWERVEAARNFANKIWNASR 588


>gi|254563518|ref|YP_003070613.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254270796|emb|CAX26801.1| methionyl-tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 522

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 23/176 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   T     T  D+  ++    +  +     
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFT-----TGTDEHGLK---IQQTASRAGV 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                      +F     RL C       R T   H      L + +  +G  Y A    
Sbjct: 72  TPRAFVDDMAGRFKAVADRLDCSY-DRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN-PADFI-----LWKRSTPMEP 202
            +       Y         E  +G     +  K + P +++     L++ S   EP
Sbjct: 131 WYSVRDEAYY------DEAETALGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEP 180


>gi|219685712|ref|ZP_03540525.1| lysine--tRNA ligase [Borrelia garinii Far04]
 gi|219672762|gb|EED29788.1| lysine--tRNA ligase [Borrelia garinii Far04]
          Length = 521

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R L+    +    Y  +  D+
Sbjct: 16 KEKGPKTLYTVASGITPSGTVHIGNFREVISVDLVARALKDSGSQVRFIYSWDNYDV 72


>gi|254446531|ref|ZP_05060007.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
 gi|198260839|gb|EDY85147.1| isoleucyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
          Length = 911

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 18/135 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 +I  H   +N +G K+SKS+G    ++ +          + + V+RL +  T +
Sbjct: 571 GGAPYKSILTHGFLVNQDGSKLSKSDGAMTLMHYM--------DKFGSDVVRLWVASTDF 622

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN-DLNT-VSAIQALHKLARE 374
           R  I  + Q L         +  T   +       LS LY+ D       I  LH+L R 
Sbjct: 623 RNDIGISEQILGGVGDAYRLFRNTFRFQ-------LSNLYDFDFEKDSMPISELHELDRW 675

Query: 375 ST-KNHDLLPIFNAS 388
           +  K  +L      +
Sbjct: 676 AVHKVGELAEAVEKA 690


>gi|184156362|ref|YP_001844701.1| isoleucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
 gi|183207956|gb|ACC55354.1| Isoleucyl-tRNA synthetase [Acinetobacter baumannii ACICU]
          Length = 945

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +  H   ++  GRK+SKS GN+I + E++       +   A  +RL +
Sbjct: 589 SMAIHNRAPYKALLTHGFTVDENGRKLSKSLGNYIPLEEII-------KQLGADGLRLYV 641

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + YR  I  + +  +       +   T
Sbjct: 642 ASSDYRYEIAASKEIFSRVSDSYRRIRNT 670


>gi|167906073|ref|ZP_02493278.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
          Length = 391

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 182 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 234

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 235 RRQRAFVARLWAFVHRVAETEAGIAAAHD 263


>gi|15605863|ref|NP_213240.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
 gi|6226187|sp|O66680|SYLA_AQUAE RecName: Full=Leucyl-tRNA synthetase subunit alpha; AltName:
           Full=Leucine--tRNA ligase subunit alpha; Short=LeuRS
 gi|2983033|gb|AAC06643.1| leucyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
          Length = 634

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 41/138 (29%), Gaps = 15/138 (10%)

Query: 17  EFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
            F+A +    + YV    P      H+G+ R   + D + R L+     K + +      
Sbjct: 23  VFKAQEGKPNKFYVLEMFPYPSGRIHMGHVRNYTIGDAIARYLKMRG--KNILHPMGWDA 80

Query: 75  IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
                   A +           +  T +N     K    L       +  AT   P+   
Sbjct: 81  FGLPAENAAIKHGIH------PAKWTYENIDYMKKQLKILGFSYDWDREIAT-CDPEYYK 133

Query: 135 LIQ----NIILHGHAYEA 148
             Q     ++  G AY  
Sbjct: 134 WNQWIFLKMLERGIAYRK 151


>gi|326437155|gb|EGD82725.1| hypothetical protein PTSG_03376 [Salpingoeca sp. ATCC 50818]
          Length = 436

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 10/110 (9%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           L    D H  G D++  H     A    A  +     I +H G   + G KMSKS GN  
Sbjct: 172 LTGTLDTHVIGKDILKFHAVYWPAFLLAA-GLNPPRRILVH-GHWTVAGAKMSKSVGNV- 228

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLS 335
            ++ L+E    G     + ++R  +L         DF+ +R   A   L+
Sbjct: 229 -VDPLVEADDVG-----SDLLRFYLLKEARLGSDADFSHKRRDAAISELA 272


>gi|312601590|gb|ADQ90845.1| Leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
          Length = 790

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 15/90 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLN-LEGRKMSKSN 282
             D++ GG +    H                    E    I IH G L   +G+KMSKS 
Sbjct: 510 PVDLYIGGQEHAVGHLIYSRFWHRVLFDAGIVPNSEPFQKI-IHQGMLLGSDGQKMSKSK 568

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML 312
           GN I   E+++        + A  IR+ ++
Sbjct: 569 GNTINPTEMID-------KFGADTIRIFLM 591


>gi|257125470|ref|YP_003163584.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
 gi|257049409|gb|ACV38593.1| methionyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
          Length = 633

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 11/113 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G A   I+ DV+ R  R    E  V ++  + +   KI E A +             
Sbjct: 18  PHVGTAYTTIICDVVARYKRLAGEE--VGFMTGVDEHGQKIQEAAEKNGF------TPQQ 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
              K +  F     +L         R T   H+  +  +I+ +   G  Y   
Sbjct: 70  WVDKMSLNFTTLWGKLNISNTDFL-RTTQERHLKTVREIIKKVHDKGDIYRGE 121


>gi|313127462|ref|YP_004037732.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
 gi|312293827|gb|ADQ68287.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
          Length = 962

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 38/108 (35%), Gaps = 12/108 (11%)

Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
           DLI  H    +                +  G   LEG KMS S G+ +   + +E     
Sbjct: 591 DLISNHLTFYLFHHAELFDQSNWPEGIVIMGMGLLEGEKMSSSKGHVVLPGKAIE----- 645

Query: 299 GRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQTSTS 343
              + A  +R  +L +   EP    D+  +++      L ++   +  
Sbjct: 646 --EYGADTVRFFLLNSA--EPWQDYDWRAEQVESVRNQLERFWNRADE 689


>gi|167922295|ref|ZP_02509386.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
          Length = 398

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 189 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 241

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 242 RRQRAFVARLWAFVHRVAETEAGIAAAHD 270


>gi|167897729|ref|ZP_02485131.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
          Length = 390

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 181 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 233

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 234 RRQRAFVARLWAFVHRVAETEAGIAAAHD 262


>gi|309811157|ref|ZP_07704953.1| isoleucine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308434887|gb|EFP58723.1| isoleucine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 1138

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 50/157 (31%), Gaps = 29/157 (18%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +         +++  H   L  +G+KMSKS  N+  ++E+ +          A  +R  +
Sbjct: 649 ATALFDKPAFSSVICHGIVLGSDGQKMSKSLRNYPDVSEVFDRDG-------ADAMRWFL 701

Query: 312 LMTHYREP------IDFTVQRLTE-----------AEILLSKWPQTSTSKGIIDPAVLSA 354
           +      P      +  T Q + +           A    + +   +      D    +A
Sbjct: 702 MS----SPILRGGNLSVTEQGIRDGVRQVMMPLWNAYSFFALYANAANGGEGYDAQWSTA 757

Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
             + L+    +  LH    +     D   I  A   +
Sbjct: 758 SNDVLDRYL-LAKLHDFVAQVQTQMDAYDIAGACDSV 793


>gi|297264627|ref|XP_002799060.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2
           [Macaca mulatta]
          Length = 522

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 255 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 304


>gi|237739547|ref|ZP_04570028.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
 gi|229423155|gb|EEO38202.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
          Length = 859

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 37/91 (40%), Gaps = 9/91 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPAVLSALYNDL 359
           A   L++ W     +  ++  A     Y+ L
Sbjct: 658 AYRFLTRVWRLIFENSELVKNAHDDIDYDKL 688


>gi|255659387|ref|ZP_05404796.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848348|gb|EEX68355.1| valine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 892

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              +++IH    + +GRKMSKS GN I   E++E        + A  +R  ++  +   P
Sbjct: 515 PFHHVFIHGLVRDSQGRKMSKSLGNGIDPVEVIE-------KYGADTLRFMLITGN--TP 565

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +R+  A    +K    S 
Sbjct: 566 GNDMRFYWERVESARNFANKIWNASR 591


>gi|189485558|ref|YP_001956499.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|170287517|dbj|BAG14038.1| valyl-tRNA synthetase [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
          Length = 883

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYRE 318
             +N++IH    +  G+KMSKS GN +   ++++        +    +R A+        
Sbjct: 512 PYSNVFIHGIVRDKNGKKMSKSLGNVVNPGDIMD-------KYGTDALRFALAQVAAPGR 564

Query: 319 PIDFTVQRLTEAEILLSKWPQTST 342
            +  + +    A    +K    S 
Sbjct: 565 DMQISEESFLAARNFANKIWNASR 588


>gi|168185547|ref|ZP_02620182.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
 gi|169296223|gb|EDS78356.1| leucyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
          Length = 812

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 16/97 (16%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I  ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGFKMSKSKGNTIAPDDYI-------KEYGADVFRMYLMFGFAYSEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
             +      + K  +  T            L N  NT
Sbjct: 614 DAIKSMGKFIDKVERILTDA-------REELNNSKNT 643


>gi|327262448|ref|XP_003216036.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like isoform 2
           [Anolis carolinensis]
          Length = 1611

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 27/113 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L ++Y        +    D + +  +               
Sbjct: 209 GYLHIGHAKAAL-------LNQHYQVNFKGKLIMRFDDTNPEKEK--------------- 246

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                   +  ++D   L    P      ++H  +++   + +I  G AY  +
Sbjct: 247 ----EDFEKVILEDVAMLHIK-PDQFTYTSDHFEKIMKYAEKLIQEGKAYVDD 294


>gi|325921029|ref|ZP_08182910.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
 gi|325548478|gb|EGD19451.1| methionyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
          Length = 696

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|313895444|ref|ZP_07829001.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976339|gb|EFR41797.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 514

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 15/84 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC---ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
           D+H  G +++  H         C   A  +     ++ H G+L ++G KMSKS GN +  
Sbjct: 255 DVHLVGKEIVRFH----TIIWGCMLMALGLALPKKVYGH-GWLIVDGAKMSKSVGNVVDP 309

Query: 289 NELLETKKFGGRSWPAPVIRLAML 312
             L+E        + A  IR  +L
Sbjct: 310 IALIE-------EFGADAIRYFLL 326


>gi|311110527|ref|ZP_07711924.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
 gi|311065681|gb|EFQ46021.1| isoleucine--tRNA ligase [Lactobacillus gasseri MV-22]
          Length = 930

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 550 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 609

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 610 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 656


>gi|217970006|ref|YP_002355240.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
 gi|217507333|gb|ACK54344.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
          Length = 733

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           NGFL ++G KMSKS G FIT         +  +      +R   
Sbjct: 344 NGFLTVDGAKMSKSRGTFIT------AHSYIAQKLDPEWLRYYF 381



 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 8/80 (10%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              H+G+    I  D+  R  R       V YV         ++ RA +E          
Sbjct: 16  GDIHLGHLVGYIQADIWVRYQRMRG--HSVHYVCADDTHGTPVMLRAEKEGL------TP 67

Query: 97  SIITSKNTQQFVKDTTRLAC 116
             +  +   + ++D T    
Sbjct: 68  EQLIERVHGEHLRDFTAFGV 87


>gi|225378201|ref|ZP_03755422.1| hypothetical protein ROSEINA2194_03861 [Roseburia inulinivorans DSM
           16841]
 gi|225210007|gb|EEG92361.1| hypothetical protein ROSEINA2194_03861 [Roseburia inulinivorans DSM
           16841]
          Length = 805

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 50/157 (31%), Gaps = 38/157 (24%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR---LAM---- 311
           E       H   L   G KMSKS GN +  ++++       R + A  +R   + +    
Sbjct: 568 EPYQKRTSHGMILGENGEKMSKSRGNVVNPDDIV-------REYGADTLRTYEMFIGAFD 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSAL-------YNDL-- 359
           L         ++   +      L +        T +      + + +        +D   
Sbjct: 621 LSAS------WSEDGVKGCRRFLERVWKLQDLMTDEEGYSADMETKMHQTIKKVSSDFEN 674

Query: 360 ---NTVSAIQALHKLARESTKNHDL-LPIFNASAHIL 392
              NT  AI A+  L  +  K + +    F     +L
Sbjct: 675 LKYNT--AIAAMMALINDFYKKNAITRGEFKTLITLL 709


>gi|218290418|ref|ZP_03494548.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
 gi|218239546|gb|EED06740.1| leucyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
          Length = 801

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 35/87 (40%), Gaps = 9/87 (10%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E    ++   G + L G KMSKS GN +  ++++         +    +R+  M +    
Sbjct: 559 EPFQRLFT-QGMITLNGAKMSKSKGNVVNPDDIIAR-------YGVDALRMYEMFVGPPE 610

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSK 344
           E  +++   L      L++  +    +
Sbjct: 611 EDAEWSTNGLEGVARFLARVYRLYAQQ 637


>gi|209883896|ref|YP_002287753.1| glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) [Oligotropha
           carboxidovorans OM5]
 gi|209872092|gb|ACI91888.1| glutamyl-Q tRNA(Asp) synthetase (Glu-Q-RSs) [Oligotropha
           carboxidovorans OM5]
          Length = 288

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 39/117 (33%), Gaps = 28/117 (23%)

Query: 33  PTVYDFAHIGNARPMIV-FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           P+   + H+G+A   ++ FD+          +     +  I DID     R R E     
Sbjct: 9   PSPNGYLHLGHAYSALLNFDLAR--------QSGGRLLLRIEDIDKP---RCRPE----- 52

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
                        +   +D   L  +  T   R + H+      + ++   G AY A
Sbjct: 53  -----------YEEAIYEDLAWLGIVWETPVRRQSEHLDIYRRAVDHLAEAGLAYPA 98


>gi|168702118|ref|ZP_02734395.1| Methionyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
          Length = 531

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+   H     A    A   E    ++ H GF+N  G+KM K+ GN +   E+
Sbjct: 257 DVHFIGKDITRFHTHIWPAMLWAA-GEEAPRKVFSH-GFVNNNGQKMGKTLGNIVDPMEI 314

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           +           A   R   +
Sbjct: 315 IAKSN-------ADAYRYYFM 328


>gi|116629831|ref|YP_815003.1| isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
 gi|116095413|gb|ABJ60565.1| Isoleucyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
          Length = 944

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 561 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 620

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 621 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 667


>gi|78187490|ref|YP_375533.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
 gi|123757168|sp|Q3B2E1|SYL_PELLD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|78167392|gb|ABB24490.1| leucyl-tRNA synthetase [Chlorobium luteolum DSM 273]
          Length = 805

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 61/194 (31%), Gaps = 50/194 (25%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA--MLMTH 315
            E    ++     L  +G KMSKS GN I  + +LE        + A  +RL    L   
Sbjct: 557 KEPFQKLFNQGMILGEDGEKMSKSRGNVIPADHVLE-------KYGADAVRLYEMFLG-- 607

Query: 316 YREPID----FTVQRLTEAEILLSKWPQTSTSKGIIDPAVL--SAL-------------- 355
              P++    +    +      L++  +          AVL  +A+              
Sbjct: 608 ---PLEQVKPWNTNGIEGVSRFLNRVWRLVHPDTEGPAAVLDEAAMPGELLRRMHKTVKK 664

Query: 356 -YND-----LNTVSAIQALH--KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
              D      NT  A   +    L R   +N + +        +L +     H+++ +  
Sbjct: 665 VREDTECLKFNTAIAEMMVFVNDLHRTGNRNREAIETL-----VLLLAPYAPHISEEL-- 717

Query: 408 AIEKLVQERLILLK 421
             E L     I   
Sbjct: 718 -WEALGHPESIARA 730


>gi|21355409|ref|NP_647932.1| Leucyl-tRNA synthetase [Drosophila melanogaster]
 gi|7292541|gb|AAF47943.1| Leucyl-tRNA synthetase [Drosophila melanogaster]
 gi|19528361|gb|AAL90295.1| LD44376p [Drosophila melanogaster]
          Length = 869

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 45/159 (28%), Gaps = 18/159 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + D + R  R     K V                A Q       
Sbjct: 71  PYPSGNLHMGHVRVYTIADSVARFQRMCG--KNVFQPMGWDSFGLPAENAANQRGVE--- 125

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
               +  T +N  Q  +   RL C    +   +T   P+     Q     +  HG AY+ 
Sbjct: 126 ---PASWTEQNIAQMKEQLKRLGCSFDWNHELSTCS-PKYYKWTQHLFLMLHRHGLAYQN 181

Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
              +              +  ++D      R   K  KK
Sbjct: 182 EALVNWDPVDKT----VLADEQVDANGCSWRSGAKVEKK 216


>gi|28211899|ref|NP_782843.1| valyl-tRNA synthetase [Clostridium tetani E88]
 gi|75541792|sp|Q891R5|SYV_CLOTE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28204342|gb|AAO36780.1| valyl-tRNA synthetase [Clostridium tetani E88]
          Length = 880

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 69/178 (38%), Gaps = 37/178 (20%)

Query: 232 DIHGGGLDLIF----------PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
           D+   G D+IF           H+  EI              + IH    + EG+KMSKS
Sbjct: 482 DVLATGYDIIFFWVARMIFSGLHNMKEI----------PFKTVLIHGIVRDSEGKKMSKS 531

Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-W 337
            GN +   E+++        + A  +R  ++  +   P   I F  +R+  A    +K W
Sbjct: 532 LGNGVDPLEVID-------KYGADALRFMLITGN--APGNDIRFYEERVESARNFANKIW 582

Query: 338 PQTSTSKGIIDPAVLSALYN--DLNTVS--AIQALHKLARESTKNHDLLPIFNASAHI 391
             +      +D  ++    +  D N      +  L+++ +E T N +   +  AS  +
Sbjct: 583 NASRYVMMNLDKNLMEKYKDCKDYNIADTWILSRLNEVIKEVTDNIEKFELGMASQKV 640


>gi|119775184|ref|YP_927924.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|187647769|sp|A1S798|SYM_SHEAM RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|119767684|gb|ABM00255.1| methionyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 675

 Score = 38.7 bits (89), Expect = 2.0,   Method: Composition-based stats.
 Identities = 40/194 (20%), Positives = 68/194 (35%), Gaps = 28/194 (14%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    + ++++ H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLHGA-GFRQPSSVYAH-GYVTVNGAKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEI--LLSKWPQ-TSTSKGI 346
                        +R      L    R + +D  ++   +     L+ K     S + G 
Sbjct: 349 -------HLDPEYLRYYYAAKLSA--RIDDLDLNLEDFAQRVNSDLVGKLVNLASRTAGF 399

Query: 347 IDPAV---LSALYND------LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC 397
           I       L+A+ +       L     I  L++ ARE  K    +      A+    +  
Sbjct: 400 ITKRFDGKLAAVADKSLIDSFLAKQDVIAELYE-AREYGKAMREIMALADVANGFVADAA 458

Query: 398 KEHLNKNISIAIEK 411
              L K      E 
Sbjct: 459 PWQLVKQDDKQEEA 472


>gi|332361762|gb|EGJ39566.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 930

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|329770195|ref|ZP_08261585.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328837001|gb|EGF86645.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 666

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 48/138 (34%), Gaps = 19/138 (13%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
             YV  P  Y     HIG+A   +  D L R  +    +    ++    +   KI ++A+
Sbjct: 5   TFYVTTPIYYPSGNLHIGHAYTTVACDALTRYKKLSGYD--TFFLTGTDEHGQKIQQKAQ 62

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRL---ACLAPTHQPRATN--HIPQMIYLIQNI 139
           ++  S                  +KD  +L     +  +   R T+  H   +  + + +
Sbjct: 63  EKGISE----------QAYVDDMIKDIKKLWKAMDIDYSKFIRTTDDYHERAVAEIFERL 112

Query: 140 ILHGHAYEANNEIIFDTS 157
           +  G  Y    +  +  S
Sbjct: 113 VEKGDIYLGEYQGWYSIS 130


>gi|327304271|ref|XP_003236827.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326459825|gb|EGD85278.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 641

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+   +++ D+L R              + +T  D+      + +  ++    
Sbjct: 113 VNAAPHIGHLYTILIADILKRWQVLLGNGD----AKLLTGTDEH---GMKIQQAALQNGL 165

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
               +  +N + F             H  R T+  H   + +  +N+   G+ YE  +E 
Sbjct: 166 EPQALCDRNCETFKVLAREANASH-DHFIRTTDSAHKAAVQFFWENLNHRGYIYEGKHEG 224

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 225 WYSVSDETFY 234


>gi|301026438|ref|ZP_07189877.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1]
 gi|299879675|gb|EFI87886.1| methionyl-tRNA synthetase [Escherichia coli MS 196-1]
          Length = 618

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 233 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 290

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 291 -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 341

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L N+L      +     A    +  +      A   I+ + ++   ++++  
Sbjct: 342 INKRFDGVLANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQA 401

Query: 406 SIAIEK 411
              + K
Sbjct: 402 PWVVAK 407


>gi|284175555|ref|ZP_06389524.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
 gi|261602455|gb|ACX92058.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
          Length = 625

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 56/167 (33%), Gaps = 31/167 (18%)

Query: 257 RIEKTANIWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGR-------------- 300
              + A   +H   G +N++G +MS   G  ITI+E+ E      R              
Sbjct: 412 GYSRFAENLLHYSYGMVNIQGLRMSGRLGKIITIDEIYEKLDSIVRNKLKEKGGNMENIN 471

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-TSTSKGIIDPAVLSALY-N- 357
                 +R  +L     +P+ F + R+T  E     + Q T      I      +L  + 
Sbjct: 472 DISNAALRYTILSVSANKPLSFDLNRITSFEQNSGPYLQYTYARAANILAKSTESLSIDK 531

Query: 358 -DLN-----------TVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
            D N            ++    + K   ++ +  DL+      + + 
Sbjct: 532 VDFNDLVGDKRKILLLIAKFPEVFKNTVDNLRLEDLVAFLRELSDVF 578


>gi|238927599|ref|ZP_04659359.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
 gi|238884524|gb|EEQ48162.1| valine--tRNA ligase [Selenomonas flueggei ATCC 43531]
          Length = 887

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   +++IH    + EGRKMSKS GN I   E++E        + A  +R  ++  
Sbjct: 507 FGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIE-------KYGADTLRFMLITG 559

Query: 315 HYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +   P   + F  +R+  A    +K    S 
Sbjct: 560 N--TPGNDMRFYWERVEAARNFANKIWNASR 588


>gi|145332859|ref|NP_001078295.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|332645859|gb|AEE79380.1| methionyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 533

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
             +GFL  +G KM KS GN +   EL+       + +    +R   L
Sbjct: 355 FGHGFLTKDGMKMGKSLGNTLEPFELV-------QKFGPDAVRYFFL 394


>gi|126653698|ref|ZP_01725617.1| valyl-tRNA synthetase [Bacillus sp. B14905]
 gi|126589735|gb|EAZ83870.1| valyl-tRNA synthetase [Bacillus sp. B14905]
          Length = 881

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 56/151 (37%), Gaps = 16/151 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ PAD   W +   +   W S   W     GW  E +     Y      +   G D+I
Sbjct: 432 GKEAPADADNWTQDEDVLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLV--TGYDII 489

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + EGRKMSKS GN +   +++E        
Sbjct: 490 FFWVSRMIFQGLEFTEQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIE-------Q 542

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTE 329
           + A  +R  +       P   + +T +++  
Sbjct: 543 YGADSLRYFLATGS--SPGQDLRYTTEKVEA 571


>gi|13605910|gb|AAK32940.1|AF367354_1 AT3g55400/T22E16_60 [Arabidopsis thaliana]
 gi|22137164|gb|AAM91427.1| AT3g55400/T22E16_60 [Arabidopsis thaliana]
          Length = 616

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
             +GFL  +G KM KS GN +   EL+       + +    +R   L
Sbjct: 355 FGHGFLTKDGMKMGKSLGNTLEPFELV-------QKFGPDAVRYFFL 394


>gi|2266985|emb|CAA74281.1| MEtRS [Arabidopsis thaliana]
          Length = 616

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
             +GFL  +G KM KS GN +   EL+       + +    +R   L
Sbjct: 355 FGHGFLTKDGMKMGKSLGNTLEPFELV-------QKFGPDAVRYFFL 394


>gi|15233258|ref|NP_191100.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
           methionine-tRNA ligase/ nucleotide binding [Arabidopsis
           thaliana]
 gi|7076783|emb|CAB75898.1| methionyl-tRNA synthetase (AtcpMetRS) [Arabidopsis thaliana]
 gi|332645858|gb|AEE79379.1| methionyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 616

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 7/47 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
             +GFL  +G KM KS GN +   EL+       + +    +R   L
Sbjct: 355 FGHGFLTKDGMKMGKSLGNTLEPFELV-------QKFGPDAVRYFFL 394


>gi|46123063|ref|XP_386085.1| hypothetical protein FG05909.1 [Gibberella zeae PH-1]
          Length = 784

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 61/193 (31%), Gaps = 56/193 (29%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  +     I  HN +  +  RKMSKS GN +     
Sbjct: 246 DVHVVGKDIIRFHAVYWPALLMAA-GLPLPKKILCHNHW-TMSNRKMSKSLGNVV----- 298

Query: 292 LETKKFGGRSWPAPVIRLAMLMTH----------------YREPI--------------- 320
                   + W    +R  ++                   Y + +               
Sbjct: 299 --NPFSAVQKWDLDPLRYFLMRNGSLKGDMSYSNESIMVIYEKELQANIGNLFNRISRNK 356

Query: 321 DFTVQRL---TEAEILLSKWPQTSTSKGIIDPAVLS-------------ALYNDLNTVSA 364
           +F+   L     A        ++S  +G   P   S                +++N  +A
Sbjct: 357 NFSWSTLGAVQAARNGDFDNIESSVPRGDAAPDFFSLESTLHDAPTTIRRDMDEINLSNA 416

Query: 365 IQALHKLARESTK 377
           ++ + +L RE+ +
Sbjct: 417 LRGVFELLREANR 429


>gi|326574245|gb|EGE24193.1| methionyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 683

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA    H GFL + G KMSKS G FI     L 
Sbjct: 294 HFIGKDIVYFHSLFWPAMLEGAGYRTPTAVN-AH-GFLTVNGEKMSKSRGTFIKAETYLT 351

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 352 -------HLDPEYLRYYFAS 364


>gi|326572648|gb|EGE22637.1| methionyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 683

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA    H GFL + G KMSKS G FI     L 
Sbjct: 294 HFIGKDIVYFHSLFWPAMLEGAGYRTPTAVN-AH-GFLTVNGEKMSKSRGTFIKAETYLT 351

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 352 -------HLDPEYLRYYFAS 364


>gi|325121110|gb|ADY80633.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
          Length = 688

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|298673986|ref|YP_003725736.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298286974|gb|ADI72940.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 563

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 4/73 (5%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR--QEHPSIPI 92
                H+G+ R  ++ D L R+L++        Y  N  DI  +I   +   +       
Sbjct: 121 PNGPLHVGHIRNSVIGDTLSRVLKHAGYNVRTQYYVN--DIGRQIAIVSWGLKNFGFDES 178

Query: 93  NDAISIITSKNTQ 105
             +   I     +
Sbjct: 179 KKSDHAIADLYIK 191


>gi|268319697|ref|YP_003293353.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
 gi|262398072|emb|CAX67086.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii FI9785]
          Length = 939

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 556 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 615

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 616 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 662


>gi|167723127|ref|ZP_02406363.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
          Length = 391

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 182 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 234

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 235 RRQRAFVARLWAFVHRVAETEAGIAAAHD 263


>gi|313894948|ref|ZP_07828507.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312976401|gb|EFR41857.1| valine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 887

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   +I+IH    + EGRKMSKS GN I   E++E        + A  +R  ++  
Sbjct: 507 FGGDVPFRDIFIHGLVRDSEGRKMSKSLGNGIDPVEVIE-------KYGADTLRFMLITG 559

Query: 315 HYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +   P   + F  +R+  A    +K    S 
Sbjct: 560 N--TPGNDMRFYWERVEAARNFANKIWNASR 588


>gi|312795361|ref|YP_004028283.1| methionyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
 gi|312167136|emb|CBW74139.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Burkholderia rhizoxinica
           HKI 454]
          Length = 728

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 31/94 (32%), Gaps = 13/94 (13%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+    I  D+  R +R +  E  V YV         I+ RA+ E  
Sbjct: 45  YANGP-----IHIGHLVEYIQTDIWVRAMRMHGHE--VYYVGADDTHGTPIMLRAQSE-- 95

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
                     +  +  Q+  +D          + 
Sbjct: 96  ----GITPRQLIERVWQEHKRDFDHFGISFDNYY 125



 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 30/78 (38%), Gaps = 8/78 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A            N++ H GFL ++G KMSKS G FI       
Sbjct: 324 HFIGKDILYFHTLFWPAMLQ-FSGHRTPTNVFAH-GFLTVDGTKMSKSRGTFI------N 375

Query: 294 TKKFGGRSWPAPVIRLAM 311
              +         +R  +
Sbjct: 376 ANSYITTGLDPQWLRYYL 393


>gi|288930565|ref|YP_003434625.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288892813|gb|ADC64350.1| valyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 864

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 45/135 (33%), Gaps = 14/135 (10%)

Query: 33  PTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI----TDID-DKIIERARQ 85
           P  Y     HIGNA      D + R  R    E       +     T++  +++    + 
Sbjct: 39  PPPYPTGSFHIGNALNWCYIDFIARYKRMKGYEVMFPQGWDCHGLPTEVKVEELYGIKKN 98

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ-----MIYLIQNII 140
           + P     +     T +N ++  +   +L       +   T + P+      +  +  + 
Sbjct: 99  DVPREKFRELCVEFTERNIKRMKETMKKLGLSIDWSKEYVTMY-PEYYRKTQVSFV-RLY 156

Query: 141 LHGHAYEANNEIIFD 155
             G  Y+  + +I  
Sbjct: 157 EKGWIYKGYHPVIVC 171


>gi|227889764|ref|ZP_04007569.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
 gi|227849628|gb|EEJ59714.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
          Length = 939

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 556 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 615

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 616 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 662


>gi|282851660|ref|ZP_06261025.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
 gi|282557628|gb|EFB63225.1| isoleucine--tRNA ligase [Lactobacillus gasseri 224-1]
          Length = 933

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 550 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 609

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 610 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 656


>gi|42518905|ref|NP_964835.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
 gi|41583191|gb|AAS08801.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
          Length = 935

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 552 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 611

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 612 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 658


>gi|51473609|ref|YP_067366.1| leucyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|60390688|sp|Q68WV8|SYL_RICTY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|51459921|gb|AAU03884.1| Leucine translase [Rickettsia typhi str. Wilmington]
          Length = 828

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 16/86 (18%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILL 334
            KMSKS  N I +  + E        + A  IRL +L  +   + + ++   +      +
Sbjct: 594 EKMSKSKKNIIDLETIQE-------QYSADAIRLFVLSDSPPEKDLQWSASGIEGCSRFI 646

Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLN 360
            K              V+S+L +D+N
Sbjct: 647 HKLDNMF--------EVISSLKDDMN 664


>gi|51473867|ref|YP_067624.1| valyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
 gi|81826287|sp|Q68W50|SYV_RICTY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|51460179|gb|AAU04142.1| Valine translase [Rickettsia typhi str. Wilmington]
          Length = 814

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 16/113 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I +S     I    NI + +G+ L  +  KMSKS GN +   
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKSHLHQNILPWKNI-MVSGWCLAEDRSKMSKSKGNVLVPE 548

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +LLE        + A VIR     +       ++   +   + L++K    + 
Sbjct: 549 KLLER-------YGADVIRYWSANSKLGADTAYSEDIMKNGKRLVNKLWNAAK 594


>gi|50086110|ref|YP_047620.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|60390694|sp|Q6F817|SYL_ACIAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|49532086|emb|CAG69798.1| leucyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 873

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 41/151 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 633 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 685

Query: 333 LLSKWPQTST---SKGIIDPAVLSALYND------------------------LNTVSAI 365
            L +  + +T    KG     + + L  D                         NT  AI
Sbjct: 686 FLKRVWRLATGFLEKGYAQAPIAAELSKDAQDLRRKTHETIQKVGDDIERRHAFNT--AI 743

Query: 366 QALHKLARESTK----NHDLLPIFNASAHIL 392
            AL +L   ++K      D   +   +   L
Sbjct: 744 AALMELLNATSKFEVQTADDAAVAREAIETL 774


>gi|16304832|emb|CAC95161.1| class 1 lysyl-tRNA synthetase [Borrelia garinii]
          Length = 521

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R L+    +    Y  +  D+
Sbjct: 16 KEKGPKNIYTVASGITPSGTVHIGNFREVISVDLVARALKDSGSQVRFIYSWDNYDV 72


>gi|324993629|gb|EGC25548.1| valine--tRNA ligase [Streptococcus sanguinis SK405]
 gi|324995059|gb|EGC26972.1| valine--tRNA ligase [Streptococcus sanguinis SK678]
          Length = 882

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + EGRKMSKS GN I   ++++        + A  +R
Sbjct: 492 IFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVID-------KYGADALR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|323972901|gb|EGB68099.1| methionyl-tRNA synthetase [Escherichia coli TA007]
          Length = 680

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 295 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 352

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 353 -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 403

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L N+L      +     A    +  +      A   I+ + ++   ++++  
Sbjct: 404 INKRFDGVLANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQA 463

Query: 406 SIAIEK 411
              + K
Sbjct: 464 PWVVAK 469


>gi|315645746|ref|ZP_07898870.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
 gi|315279224|gb|EFU42534.1| valyl-tRNA synthetase [Paenibacillus vortex V453]
          Length = 889

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 18/152 (11%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           +  IH    + EGRKMSKS GN I   E++E        + A  +R
Sbjct: 506 IFQGLEFTDQMPFKDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIE-------QYGADAMR 558

Query: 309 LAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTV 362
             +       P   + F  +R+ +A    +K    S    +      +A  +   +L T 
Sbjct: 559 YMISTGS--TPGQDLRFRWERVEQARNFANKIWNASRFALMNLEGFTAADIDISGELGTA 616

Query: 363 S--AIQALHKLARESTKNHDLLPIFNASAHIL 392
               +  L++ +R+ T+  D    F  +  +L
Sbjct: 617 DRWILHRLNETSRDITRLIDAYE-FGETGRLL 647


>gi|291547952|emb|CBL21060.1| valyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 884

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 44/193 (22%), Positives = 77/193 (39%), Gaps = 32/193 (16%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +  +          ++ IH    + +GRKMSKS GN I   E+
Sbjct: 481 DVLVTGYDIIFFWVIRMVFSALEQTGETPFHHVLIHGLVRDSQGRKMSKSLGNGIDPLEV 540

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTS------- 341
           ++        + A  +RL ++  +   P   + F  +R+  +    +K    S       
Sbjct: 541 ID-------KYGADALRLTLMTGN--APGNDMRFYWERVESSRNFANKIWNASRFIMMNL 591

Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH- 400
             K +  P  L+AL N+   +  +  L+ + R+ T+N D           LGI V K + 
Sbjct: 592 EGKTVTAPEDLNALCNEDKWI--LSRLNTVIRDVTENMDKYE--------LGIAVQKVYD 641

Query: 401 --LNKNISIAIEK 411
              ++     IE 
Sbjct: 642 FLWDELCDWYIEM 654


>gi|291461006|ref|ZP_06026392.2| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
 gi|291379583|gb|EFE87101.1| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
          Length = 862

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 12/92 (13%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 608 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 660

Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYN-DLN 360
           A   L++  +       +   V +A  + D N
Sbjct: 661 AYRFLTRVWRLIFENSEL---VKNAHDDIDYN 689


>gi|260752469|ref|YP_003225362.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258551832|gb|ACV74778.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 521

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D+I  H     A    AD       ++ H GFL   G KMSKS GN +   ++
Sbjct: 256 DIHVIGKDIIRFHAVYWPAFLMAADIALP-KKVFGH-GFLLNRGEKMSKSVGNVVDPIDM 313

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                   + +    IR  +L
Sbjct: 314 -------AKLYGVDQIRYFLL 327


>gi|257387116|ref|YP_003176889.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169423|gb|ACV47182.1| isoleucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 1089

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 8/83 (9%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H   L  +GR MSKS        ++          + A  +R  +L 
Sbjct: 591 AAVGASPYERVVMHGHALMPDGRAMSKS-------RDIRVDPGEVIDDYGADPMRAFLLS 643

Query: 314 THYR-EPIDFTVQRLTEAEILLS 335
              R E ++F+     E +  L+
Sbjct: 644 LAARGEDMNFSYDGTEEMQRRLN 666


>gi|51598914|ref|YP_073102.1| lysyl-tRNA synthetase [Borrelia garinii PBi]
 gi|55977753|sp|Q937U7|SYK_BORGA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
          ligase; Short=LysRS
 gi|51573485|gb|AAU07510.1| lysyl-tRNA synthetase [Borrelia garinii PBi]
          Length = 521

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R L+    +    Y  +  D+
Sbjct: 16 KEKGPKNIYTVASGITPSGTVHIGNFREVISVDLVARALKDSGSQVRFIYSWDNYDV 72


>gi|329667549|gb|AEB93497.1| isoleucyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
          Length = 928

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 545 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 604

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 605 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 651


>gi|327490058|gb|EGF21846.1| valine--tRNA ligase [Streptococcus sanguinis SK1058]
          Length = 883

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + EGRKMSKS GN I   ++++        + A  +R
Sbjct: 492 IFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVID-------KYGADALR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|299535363|ref|ZP_07048685.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298729124|gb|EFI69677.1| leucyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 805

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 40/124 (32%), Gaps = 14/124 (11%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDIYIGGAEHAVLHLLYARFWHKVLYDLGVVHTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++ +         A  +RL  M M      + ++   L  A   L +  +   
Sbjct: 583 NVVNPDEIITSHG-------ADTLRLYEMFMGPLEASVAWSTNGLDGARRFLDRIWRLFV 635

Query: 343 SKGI 346
           ++  
Sbjct: 636 NEED 639


>gi|294085121|ref|YP_003551881.1| sensor signal transduction histidine kinase [Candidatus
           Puniceispirillum marinum IMCC1322]
 gi|292664696|gb|ADE39797.1| periplasmic sensor signal transduction histidine kinase [Candidatus
           Puniceispirillum marinum IMCC1322]
          Length = 429

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 17/109 (15%)

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---HDL 381
           + L+EA++ +++  Q + + G +  A    L + LNT++ I   H+L+RE T++   ++ 
Sbjct: 192 EALSEAQLAVAE-EQQAVALGSLATAAAHKLGSPLNTITVIS--HELSREITEDDPIYED 248

Query: 382 LPIFNASAH----ILG-IEVCKEHLNKNISIA------IEKLVQERLIL 419
           + +    A     ILG +E  K     +          IE L+QER   
Sbjct: 249 IQLLRVEAERCRVILGSLEDYKLQSKPDFETELPINVLIEDLLQERFDA 297


>gi|294660540|ref|NP_853350.2| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|298286869|sp|Q7NAR7|SYV_MYCGA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|284812203|gb|AAP56918.2| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
 gi|284930843|gb|ADC30782.1| valyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
          Length = 860

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              ++ +H   L+   RKMSKS  N +   ++++        + A  +RL +       P
Sbjct: 510 PFHDLLLHGLILDEHNRKMSKSLNNGVDPIQIID-------QYGADALRLFLTSN--TSP 560

Query: 320 ---IDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
              + + V+++  A   L+K    +    +ID 
Sbjct: 561 GEDVSYNVEKINAAASFLNKLWNLARYLKLIDQ 593


>gi|257094627|ref|YP_003168268.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257047151|gb|ACV36339.1| leucyl-tRNA synthetase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 879

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 28/96 (29%), Gaps = 10/96 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP   + Y      Y     H+G+ R   + DVL R  R            N+       
Sbjct: 37  DPKRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLARFHRMLGY--------NVLQPMGWD 88

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                 E+ ++  N   +  T  N         RL 
Sbjct: 89  AFGMPAENAAMQNNVPPAQWTYANIDYMKAQLKRLG 124



 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 47/141 (33%), Gaps = 37/141 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    L++        + A   RL ++  +   + ++++   +  A   L
Sbjct: 638 EKMSKSKNNGVDPQALID-------QYGADTARLFIMFASPPDQSLEWSDAGVEGAFRFL 690

Query: 335 SKWPQTS---TSKGIIDPAVLSAL------------------YND------LNTVSAIQA 367
            +  +      S G + P   +AL                   +D       NT  AI A
Sbjct: 691 KRLWRIVFEHLSAGPVAPLEATALTAELKALRRQLHQTIGKVADDYGRRKQFNT--AIAA 748

Query: 368 LHKLARESTKNHDLLPIFNAS 388
           + +L     +      +  A 
Sbjct: 749 VMELLNAYVRIAGDSAVVRAV 769


>gi|154276782|ref|XP_001539236.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
 gi|150414309|gb|EDN09674.1| leucyl-tRNA synthetase, mitochondrial precursor [Ajellomyces
           capsulatus NAm1]
          Length = 834

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 52/189 (27%), Gaps = 31/189 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DVL R    +     V +     D      E A  E    P 
Sbjct: 73  PYPSGALHLGHVRVYTISDVLARF--KHMKGYDVLHPMGW-DAFGLPAENAAIERGIDPA 129

Query: 93  NDAISIITSKNT------QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  I +          +F  D   L   +P        H  ++  +   +   G AY
Sbjct: 130 KWTMQNIANMKEQLRAIGARFDWDRE-LMTCSPEFY----KHTQRIFLM---LYKEGLAY 181

Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF---------ILWKR 196
           +A   +              +  ++D      R   K  K     +          L K 
Sbjct: 182 QAKARVNYDPIDKT----VLANEQVDANGCSWRSGAKVEKLELKQWFFRITAFKEALLKD 237

Query: 197 STPMEPGWE 205
              +E  W 
Sbjct: 238 LESLEASWP 246


>gi|153956201|ref|YP_001396966.1| leucyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856526|ref|YP_002473648.1| hypothetical protein CKR_3183 [Clostridium kluyveri NBRC 12016]
 gi|189082994|sp|A5N399|SYL_CLOK5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|146349059|gb|EDK35595.1| LeuS [Clostridium kluyveri DSM 555]
 gi|219570250|dbj|BAH08234.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 811

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 54/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G+KMSKS GN I+ ++ +       + + + V R+ ++    Y E   +  
Sbjct: 559 HQGLILGPDGQKMSKSKGNTISPDDCI-------QKYGSDVFRMYLMFGFDYAEGGAWND 611

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPA---VLSALY------------------ND----- 358
             +      + +  +   +   +  +     +++                    D     
Sbjct: 612 DGIKSMSKFVDRIERIVGNIKELINSGKNFKNSMDAAEKELNYSRNYSIKSVSEDAGKFQ 671

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A       +L+K  +E TKN  LL 
Sbjct: 672 FNTAIARIMEFTNSLYKYIQEDTKNISLLK 701


>gi|84029519|sp|Q74JX6|SYI_LACJO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 928

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 545 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 604

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 605 SPNDVI-------KQMGAEIIRLWVAGADTTSDVAVSQDILRQSAESYRKIRNT 651


>gi|326568654|gb|EGE18725.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 683

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA    H GFL + G KMSKS G FI     L 
Sbjct: 294 HFIGKDIVYFHSLFWPAMLEGAGYRTPTAVN-AH-GFLTVNGEKMSKSRGTFIKAETYLT 351

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 352 -------HLDPEYLRYYFAS 364


>gi|241761929|ref|ZP_04760014.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241373609|gb|EER63181.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 521

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D+I  H     A    AD       ++ H GFL   G KMSKS GN +   ++
Sbjct: 256 DIHVIGKDIIRFHAVYWPAFLMAADIALP-KKVFGH-GFLLNRGEKMSKSVGNVVDPIDM 313

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                   + +    IR  +L
Sbjct: 314 -------AKLYGVDQIRYFLL 327


>gi|226197558|ref|ZP_03793133.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
 gi|225930167|gb|EEH26179.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
          Length = 439

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 230 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 282

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 283 RRQRAFVARLWAFVHRVAETEAGIAAAHD 311


>gi|167819287|ref|ZP_02450967.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
          Length = 387

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 178 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 230

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 231 RRQRAFVARLWAFVHRVAETEAGIAAAHD 259


>gi|188992353|ref|YP_001904363.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. B100]
 gi|226710938|sp|B0RWA1|SYM_XANCB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167734113|emb|CAP52319.1| unnamed protein product [Xanthomonas campestris pv. campestris]
          Length = 694

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|170744506|ref|YP_001773161.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168198780|gb|ACA20727.1| methionyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 515

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 38/130 (29%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   T     T  D+  ++    +  +     
Sbjct: 15  PNGAPHIGHAYEVIAADAIARFKRIDGYDVFFT-----TGTDEHGLK---IQQTAAKAGI 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
           +          +F      L C       R T  +HI     L + +   G  Y A    
Sbjct: 67  SPRAFVDAMAPRFRTMAETLNCG-FDRFIRTTDPDHIASSQALWRRMEAAGDIYLAKYAG 125

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 126 WYSVRDEAYY 135


>gi|148977648|ref|ZP_01814224.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
 gi|145963163|gb|EDK28431.1| methionyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
          Length = 486

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 43/111 (38%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 91  HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKASTYLN 148

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                        +R       Y   ++    R+ + ++ L  + Q   + 
Sbjct: 149 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNAD 184


>gi|154706261|ref|YP_001423731.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|165918316|ref|ZP_02218402.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334]
 gi|189083258|sp|A9KDF8|SYM_COXBN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|154355547|gb|ABS77009.1| methionyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
 gi|165917966|gb|EDR36570.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 334]
          Length = 546

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA I++H G+L + G+KMSKS G FIT +  L+
Sbjct: 291 HFVGKDIVYFHALFWPAMLSGAGFRLPTA-IYVH-GYLTVNGQKMSKSRGTFITAHHYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 349 -------HLSPEYLRYY 358


>gi|83589396|ref|YP_429405.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
 gi|83572310|gb|ABC18862.1| valyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
          Length = 880

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 28/179 (15%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  + IH   L+ +GRKMSKS GN +   E++E        + A  +RL ++  + 
Sbjct: 505 GEVPFREVLIHGLVLDAQGRKMSKSLGNGVDPMEVIE-------KYGADTLRLMLVTGN- 556

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--AIQA 367
             P   + F  +RL       +K    +     +    +PA L     +L       +  
Sbjct: 557 -TPGNDLRFHPERLEGTRNFANKIWNAARFALMNLEDYEPAPLE--RENLTLADRWILSR 613

Query: 368 LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL--ILLKMKK 424
           L+KL  E     +   I    A +L     +    +     IE L++ RL     + ++
Sbjct: 614 LNKLVLEVNACLEAYEI-GEVARML----YEFFWGEFCDWYIE-LIKPRLYGENRRERQ 666


>gi|194436183|ref|ZP_03068285.1| methionyl tRNA synthetase [Escherichia coli 101-1]
 gi|253772958|ref|YP_003035789.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|254162129|ref|YP_003045237.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|300930934|ref|ZP_07146296.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|194424911|gb|EDX40896.1| methionyl tRNA synthetase [Escherichia coli 101-1]
 gi|242377757|emb|CAQ32519.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|253324002|gb|ACT28604.1| methionyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974030|gb|ACT39701.1| methionyl-tRNA synthetase [Escherichia coli B str. REL606]
 gi|253978198|gb|ACT43868.1| methionyl-tRNA synthetase [Escherichia coli BL21(DE3)]
 gi|300461223|gb|EFK24716.1| methionyl-tRNA synthetase [Escherichia coli MS 187-1]
 gi|323961710|gb|EGB57314.1| methionyl-tRNA synthetase [Escherichia coli H489]
          Length = 677

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 292 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 349

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 350 -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 400

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L N+L      +     A    +  +      A   I+ + ++   ++++  
Sbjct: 401 INKRFDGVLANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQA 460

Query: 406 SIAIEK 411
              + K
Sbjct: 461 PWVVAK 466


>gi|157161597|ref|YP_001458915.1| methionyl-tRNA synthetase [Escherichia coli HS]
 gi|170019566|ref|YP_001724520.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|188496162|ref|ZP_03003432.1| methionyl tRNA synthetase [Escherichia coli 53638]
 gi|256022200|ref|ZP_05436065.1| methionyl-tRNA synthetase [Escherichia sp. 4_1_40B]
 gi|187647720|sp|A8A1X8|SYM_ECOHS RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189083260|sp|B1IYW7|SYM_ECOLC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157067277|gb|ABV06532.1| methionyl tRNA synthetase [Escherichia coli HS]
 gi|169754494|gb|ACA77193.1| methionyl-tRNA synthetase [Escherichia coli ATCC 8739]
 gi|188491361|gb|EDU66464.1| methionyl tRNA synthetase [Escherichia coli 53638]
 gi|309702432|emb|CBJ01756.1| Methionyl-tRNA synthetase [Escherichia coli ETEC H10407]
          Length = 677

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 292 HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 349

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 350 -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 400

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L N+L      +     A    +  +      A   I+ + ++   ++++  
Sbjct: 401 INKRFDGVLANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQA 460

Query: 406 SIAIEK 411
              + K
Sbjct: 461 PWVVAK 466


>gi|46204985|ref|ZP_00049208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 348

 Score = 38.7 bits (89), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 38/130 (29%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   T     T  D+  ++    +  +     
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFT-----TGTDEHGLK---IQQTAARAGV 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                      +F     RL C A     R T   H      L + +  +G  Y A    
Sbjct: 72  TPRAFVDDMAGRFKAVADRLDC-AYDRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAG 130

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 131 WYSVRDEAYY 140


>gi|327469020|gb|EGF14492.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK330]
          Length = 930

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|316970480|gb|EFV54413.1| putative isoleucine--tRNA ligase [Trichinella spiralis]
          Length = 1027

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 53/146 (36%), Gaps = 23/146 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV----I 307
           S   ++     N+ +H   L+ +G KMSKS GN IT + ++  +   G      V    +
Sbjct: 583 SVAVEQRSPYKNVLLHGFVLDEQGHKMSKSVGNVITPDAVISGQGEIGSKQLPAVGVDGL 642

Query: 308 RLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
           RL +      R  I    Q L   +  L +   T           L  + ND +  +   
Sbjct: 643 RLWVAQCAADRTHIPVGPQSLLTVKQTLGQLRSTL--------CFLLGVLNDFDCSN--- 691

Query: 367 ALHKLARESTKNHDLLPIFNASAHIL 392
                  +S +   LL +     H+L
Sbjct: 692 -------DSVEYDRLLVVDKYMLHVL 710


>gi|255660361|ref|ZP_05405770.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
          Length = 756

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L  +G+KMSKS GN I    L+++         A  +RL ++ M      + +  + L  
Sbjct: 527 LGPDGKKMSKSKGNTINPTPLVDSHG-------ADALRLYLMFMGPISASLTWNDEGLNG 579

Query: 330 AEILLSKWPQTSTSKGIIDPAV 351
               L +      +  ++   V
Sbjct: 580 MRRWLDRVYNFFFNHAVVTDQV 601


>gi|218185098|gb|EEC67525.1| hypothetical protein OsI_34822 [Oryza sativa Indica Group]
          Length = 349

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               + N+ + + +LV  R    K + + SAD +   L+  G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235


>gi|212211972|ref|YP_002302908.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
 gi|238064876|sp|B6J3N7|SYM_COXB2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|212010382|gb|ACJ17763.1| methionyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
          Length = 546

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA I++H G+L + G+KMSKS G FIT +  L+
Sbjct: 291 HFVGKDIVYFHALFWPAMLSGAGFRLPTA-IYVH-GYLTVNGQKMSKSRGTFITAHHYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 349 -------HLSPEYLRYY 358


>gi|167827657|ref|ZP_02459128.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
          Length = 385

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 176 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 228

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 229 RRQRAFVARLWAFVHRVAETEAGIAAAHD 257


>gi|163745430|ref|ZP_02152790.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
 gi|161382248|gb|EDQ06657.1| leucyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
          Length = 848

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 37/143 (25%), Gaps = 19/143 (13%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            +    + YV    P      H+G+ R   + DV+ R          V +          
Sbjct: 27  RNADKPKYYVLEMFPYPSGRIHMGHVRNYTMGDVIARY--KIATGHNVLHPMGWDAFGMP 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC------LAPTHQPRATNHIPQM 132
               A             +  T  N  +  K    L           T  P    +  Q 
Sbjct: 85  AENAAMAIGGH------PADWTYANIAEMKKQMKPLGLSIDWSREIATCHP---GYYGQQ 135

Query: 133 IYLIQNIILHGHAYEANNEIIFD 155
             L  + +  G  Y  N  + +D
Sbjct: 136 QALFLDFLEKGLVYRKNAVVNWD 158


>gi|148553410|ref|YP_001260992.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|148498600|gb|ABQ66854.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 523

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 27/78 (34%), Gaps = 8/78 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A   I  D + R  R    +     VR  T  D+  ++ A+        +     
Sbjct: 22  PHIGHAYEAIAADAIARFQRSMGRD-----VRFQTGTDEHGLKMAQAARAR---DITPRA 73

Query: 99  ITSKNTQQFVKDTTRLAC 116
           +  + +  F +    L  
Sbjct: 74  LADEMSSYFKEMCETLNI 91


>gi|115483783|ref|NP_001065553.1| Os11g0109500 [Oryza sativa Japonica Group]
 gi|113644257|dbj|BAF27398.1| Os11g0109500 [Oryza sativa Japonica Group]
          Length = 311

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               + N+ + + +LV  R    K + + SAD +   L+  G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235


>gi|315658074|ref|ZP_07910946.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
 gi|315496403|gb|EFU84726.1| valine--tRNA ligase [Staphylococcus lugdunensis M23590]
          Length = 876

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 23/168 (13%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   +++E  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTERRPFQDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
                 + A  +R  +       P   + ++ +++      ++K W     S   I    
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGARFSLMNIGEDF 589

Query: 352 LSALYN-DL--NTVSA----IQALHKLARESTKNHDLLPIFNASAHIL 392
             A+ + DL  N   A    +  L++     T   D    F     +L
Sbjct: 590 --AVEDIDLSGNLSLADKWILTRLNETIETVTDLSDKYE-FGEVGRVL 634


>gi|296113614|ref|YP_003627552.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295921308|gb|ADG61659.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 683

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA    H GFL + G KMSKS G FI     L 
Sbjct: 294 HFIGKDIVYFHSLFWPAMLEGAGYRTPTAVN-AH-GFLTVNGEKMSKSRGTFIKAETYLT 351

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 352 -------HLDPEYLRYYFAS 364


>gi|293609112|ref|ZP_06691415.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024]
 gi|292829685|gb|EFF88047.1| methionyl-tRNA synthetase [Acinetobacter sp. SH024]
          Length = 688

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    T      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPTGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|285019248|ref|YP_003376959.1| methionyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
 gi|283474466|emb|CBA16967.1| probable methionyl-trna synthetase protein [Xanthomonas
           albilineans]
          Length = 686

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 32/97 (32%), Gaps = 15/97 (15%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCA--DRIEKTANIWIH-NGFLNLE 274
              LG+ F+ H         HH       N       A        A   +H NG+L ++
Sbjct: 268 CARLGESFEAHLAAGSSTELHHFIGKDIVNFHGLFWPAVLHGTGHRAPTRLHVNGYLTVD 327

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           G KMSKS G F+     L+             +R   
Sbjct: 328 GAKMSKSRGTFVMARTYLDV------GLEPEALRYYF 358


>gi|269114834|ref|YP_003302597.1| Arginyl-tRNA synthetase [Mycoplasma hominis]
 gi|268322459|emb|CAX37194.1| Arginyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
          Length = 543

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 7/46 (15%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           KMSK  G  +T+ EL E             IR  ++   Y   IDF
Sbjct: 377 KMSKRLGTSLTLRELAEEVGN-------DAIRYFLIDRSYNSRIDF 415


>gi|262371100|ref|ZP_06064422.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262313986|gb|EEY95031.1| leucyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 873

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 20/142 (14%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    +++        + A   R+ M+      + ++++   +  A  
Sbjct: 632 GQEKMSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANR 684

Query: 333 LLSK-------WPQTSTSKGIIDPAVLSALYNDL--NTVSAIQALHKLARESTKNHDLLP 383
            L +       + +   +   ID A LS    DL   T   IQ   K+  +  + H    
Sbjct: 685 FLKRVWRLVASFLEKGNAASAIDTAQLSTEAQDLRRKTHETIQ---KVGDDIERRHAFNT 741

Query: 384 IFNASAHILGIEVCKEHLNKNI 405
              A   +L      E  N N 
Sbjct: 742 AIAAMMELLNANNKFEAKNDND 763


>gi|218532446|ref|YP_002423262.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218524749|gb|ACK85334.1| methionyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 522

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 53/176 (30%), Gaps = 23/176 (13%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A  +I  D + R  R    +   T     T  D+  ++    +  +     
Sbjct: 20  PNGAPHIGHAYEVIATDAIARFHRLDGRDVLFT-----TGTDEHGLK---IQQTASRAGV 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
                      +F     RL C       R T   H      L + +  +G  Y A    
Sbjct: 72  TPRAFVDDMAGRFKAVADRLDCSY-DRFIRTTEADHYAAAQELWRRMEANGDIYLAKYAG 130

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN-PADFI-----LWKRSTPMEP 202
            +       Y         E  +G     +  K + P +++     L++ S   EP
Sbjct: 131 WYSVRDEAYY------DEAETTLGPDGNRRSIKTDTPVEWMEEENYLFRLSKYQEP 180


>gi|154337126|ref|XP_001564796.1| methionyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
 gi|134061834|emb|CAM38870.1| putative methionyl-tRNA synthetase [Leishmania braziliensis
           MHOM/BR/75/M2904]
          Length = 752

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 21/130 (16%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ DVL R  R    E    +V   TD   + +  A  +   +   D
Sbjct: 221 VNASPHIGHVYSTLIVDVLGRYHRVKGEE---VFVMTGTDEHGQKVAEAAAKQG-VSTMD 276

Query: 95  AISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLI----QNIILHGHAYE 147
             + ++++  Q F +   D          +  R TN + +   L+    + +   G  Y 
Sbjct: 277 FTTSVSNEFKQCFKEMNYDM--------NYFIRTTNPMHE--KLVGDIWKKLEAKGDIYL 326

Query: 148 ANNEIIFDTS 157
              E  +  S
Sbjct: 327 GKYEGWYSVS 336


>gi|94501467|ref|ZP_01307986.1| leucyl-tRNA synthetase [Oceanobacter sp. RED65]
 gi|94426432|gb|EAT11421.1| leucyl-tRNA synthetase [Oceanobacter sp. RED65]
          Length = 859

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 37/142 (26%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N +   E ++        + A V+RL  M      + ++++   +  A+  L 
Sbjct: 618 KMSKSKNNGVDPQEAID-------QYGADVVRLYTMFAAPPEQSLEWSNSGVQGAQKFLQ 670

Query: 336 K-WPQTSTSKGIIDPAVLSA--------------------LYND------LNTVSAIQAL 368
           + W   S      D   + A                    + +D       NT  AI A+
Sbjct: 671 RVWRLASELLDGSDIPAIDAEALSSEQKDARRKTHETIQKVSDDIGRRYAFNT--AIAAV 728

Query: 369 HKLARESTKNHDLLPIFNASAH 390
            +L     K         A  H
Sbjct: 729 MELTNTLVKLDKSDAQNRAILH 750


>gi|332209686|ref|XP_003253944.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like [Nomascus
           leucogenys]
          Length = 613

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 346 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 395


>gi|161869318|ref|YP_001598485.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
 gi|161594871|gb|ABX72531.1| leucyl-tRNA synthetase [Neisseria meningitidis 053442]
          Length = 914

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 671 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 723

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 724 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 781

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 782 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 810



 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 60  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 110

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 111 -----VMQPMGWD---AFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGF--AIDWA 160

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 161 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 197


>gi|327262446|ref|XP_003216035.1| PREDICTED: bifunctional aminoacyl-tRNA synthetase-like isoform 1
           [Anolis carolinensis]
          Length = 1524

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/113 (13%), Positives = 36/113 (31%), Gaps = 27/113 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L ++Y        +    D + +  +               
Sbjct: 209 GYLHIGHAKAAL-------LNQHYQVNFKGKLIMRFDDTNPEKEK--------------- 246

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                   +  ++D   L    P      ++H  +++   + +I  G AY  +
Sbjct: 247 ----EDFEKVILEDVAMLHIK-PDQFTYTSDHFEKIMKYAEKLIQEGKAYVDD 294


>gi|297669110|ref|XP_002812749.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 1
           [Pongo abelii]
          Length = 613

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 346 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 395


>gi|296205176|ref|XP_002749647.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 1
           [Callithrix jacchus]
          Length = 593

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 326 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 375


>gi|270292379|ref|ZP_06198590.1| isoleucine--tRNA ligase [Streptococcus sp. M143]
 gi|270278358|gb|EFA24204.1| isoleucine--tRNA ligase [Streptococcus sp. M143]
          Length = 930

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L++      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILSQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|167957600|ref|ZP_02544674.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 493

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 18/74 (24%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI----- 320
           + +G +  +G+KMSKS GN ++ NE+++T       + A   R      H    I     
Sbjct: 285 LVHGHIGFDGKKMSKSLGNVVSPNEVIDT-------YGADAFRYYF-SRH----IPTLDD 332

Query: 321 -DFTVQRLTEAEIL 333
            DFT ++  +A   
Sbjct: 333 GDFTWEKFEKAYNN 346


>gi|164688857|ref|ZP_02212885.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
 gi|164602061|gb|EDQ95526.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
           16795]
          Length = 648

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 19/127 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+    +  D + R  R+   +  V ++    +  +KI ++A++   +          
Sbjct: 20  HIGHTYTTVATDAIARFKRFCGYD--VRFLTGTDEHGEKIQKKAKEAGMTEME------- 70

Query: 100 TSKNTQQFVKDTTRL---ACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY--EANNEI 152
                   + D  +L     ++     R T   H   +  +   +   G  Y  E     
Sbjct: 71  ---YLDGMIADIKKLWKTMDISYDDFIRTTEPRHTKIIQKIFTKLYEQGDIYKGEYEGRY 127

Query: 153 IFDTSSI 159
                S 
Sbjct: 128 CTPCESF 134


>gi|147921041|ref|YP_685149.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121685571|sp|Q0W720|SYI_UNCMA RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|110620545|emb|CAJ35823.1| isoleucyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 1104

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 52/151 (34%), Gaps = 34/151 (22%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     + +H   L+  G+KMSKS GN +   +++E          A  +RL +L 
Sbjct: 621 VGFGKAPYNGVCMHGFTLDETGKKMSKSLGNVVAPEDVVEKLG-------ADTLRLYVLS 673

Query: 314 TH--------------------------YREPIDF-TVQRLTEAEILLSKWPQTSTSKGI 346
            +                          YR P+ +  + +   A++ L     +   +  
Sbjct: 674 QNAPWEDLSFSWEECGNINRAINIFWNVYRFPLPYMVLDKFDPAKVTLESVKGSLRVEDR 733

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              + L A+  D++T  A   LH+  R    
Sbjct: 734 WILSKLQAVIKDVDTYMATYELHRATRSIIS 764


>gi|86741959|ref|YP_482359.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
 gi|86568821|gb|ABD12630.1| methionyl-tRNA synthetase [Frankia sp. CcI3]
          Length = 662

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 16/135 (11%)

Query: 33  PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           PT     H+G+   P +  D   R  R       + ++    D    +++ AR+E     
Sbjct: 129 PTPNGDLHLGHLSGPYLGADAYVRFQRMNGAN--IWHLTGSDDFQSYVVDCARRE----- 181

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHGHAYE 147
              + +   +  + + + +T RL  +        TN    ++P +      ++  G    
Sbjct: 182 -GRSNAETAAHYSAE-IAETLRLMDIPLDQYT-VTNADPSYVPALKDFFTRLVDSGAIAP 238

Query: 148 ANNEIIFDTSSIPNY 162
           ++   +FD      Y
Sbjct: 239 SDGPALFD-PKTGQY 252


>gi|77464139|ref|YP_353643.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|77388557|gb|ABA79742.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 984

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   E+++        + A ++RL 
Sbjct: 637 QACGTKGRAPYRGVVTHGFTLDEKGMKMSKSLGNTVVPQEVID-------QYGADILRLW 689

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    +        + L        +   T
Sbjct: 690 VAQADFTVDQRIGKEILKGTADSYRRLRNT 719


>gi|56551988|ref|YP_162827.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|56543562|gb|AAV89716.1| methionyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 521

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D+I  H     A    AD       ++ H GFL   G KMSKS GN +   ++
Sbjct: 256 DIHVIGKDIIRFHAVYWPAFLMAADIALP-KKVFGH-GFLLNRGEKMSKSVGNVVDPIDM 313

Query: 292 LETKKFGGRSWPAPVIRLAML 312
                   + +    IR  +L
Sbjct: 314 -------AKLYGVDQIRYFLL 327


>gi|326562649|gb|EGE12951.1| methionyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
          Length = 683

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA    H GFL + G KMSKS G FI     L 
Sbjct: 294 HFIGKDIVYFHSLFWPAMLEGAGYRTPTAVN-AH-GFLTVNGEKMSKSRGTFIKAETYLT 351

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 352 -------HLDPEYLRYYFAS 364


>gi|326560048|gb|EGE10443.1| methionyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 683

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA    H GFL + G KMSKS G FI     L 
Sbjct: 294 HFIGKDIVYFHSLFWPAMLEGAGYRTPTAVN-AH-GFLTVNGEKMSKSRGTFIKAETYLT 351

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 352 -------HLDPEYLRYYFAS 364


>gi|323498216|ref|ZP_08103218.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
 gi|323316644|gb|EGA69653.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
          Length = 686

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/192 (16%), Positives = 63/192 (32%), Gaps = 31/192 (16%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPDNVFVH-GYVTVNGAKMSKSKGTFIKAATYLD 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------T 340
                        +R       Y   ++    R+ + ++ L  + Q              
Sbjct: 349 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFTQRVNADVVNKIVNLA 393

Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKE 399
           S + G I       L  +             A    + ++      A   I  + +   +
Sbjct: 394 SRNAGFITKRFEGKLSANFAEPELYNEFAAAADRIAELYETREFGRAIREITALADKANQ 453

Query: 400 HLNKNISIAIEK 411
           ++++     + K
Sbjct: 454 YVDEKAPWVVAK 465


>gi|284931233|gb|ADC31171.1| valyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 860

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 12/93 (12%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              ++ +H   L+   RKMSKS  N +   ++++        + A  +RL +       P
Sbjct: 510 PFHDLLLHGLILDEHNRKMSKSLNNGVDPIQIID-------QYGADALRLFLTSN--TSP 560

Query: 320 ---IDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
              + + V+++  A   L+K    +    +ID 
Sbjct: 561 GEDVSYNVEKINAAASFLNKLWNLARYLKLIDQ 593


>gi|152967451|ref|YP_001363235.1| valyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|151361968|gb|ABS04971.1| tRNA synthetase valyl/leucyl anticodon-binding [Kineococcus
           radiotolerans SRS30216]
          Length = 877

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 70/201 (34%), Gaps = 36/201 (17%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G D+I     + + +S         A   +    L+ + +KMSKS GN +T  
Sbjct: 554 PMDLRPQGQDIIRTWLFSTVVRSHLEFGGLPWARTALSGWILDPDRKKMSKSKGNVVTPL 613

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR-------------LTEAEILLSK 336
            LLE        + +  +R     +  R   D T                L  ++ +L  
Sbjct: 614 ALLE-------EFGSDAVRYWAASS--RLGTDATFDTGQMKIGRRLAMKLLNASKFVLGL 664

Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
             +  T+      AV  A+       S +  L  + R++T        F    H   ++V
Sbjct: 665 GVERGTAAD--PAAVTEAVD-----ASVLADLAVVVRQAT------EAFERYDHASALDV 711

Query: 397 CKEHLNKNISIAIEKLVQERL 417
            ++         +E LV++R 
Sbjct: 712 TEKFFWNFCDDWVE-LVKDRA 731


>gi|21230796|ref|NP_636713.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66769206|ref|YP_243968.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|25009358|sp|Q8PAY7|SYM_XANCP RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|81304835|sp|Q4USM5|SYM_XANC8 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|21112396|gb|AAM40637.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66574538|gb|AAY49948.1| methionyl-tRNA synthetase [Xanthomonas campestris pv. campestris
           str. 8004]
          Length = 696

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   A   +H NG+L ++G KMSKS G F+     L+             +R   
Sbjct: 306 VLHGTGHRAPTRLHVNGYLMVDGAKMSKSRGTFVMARTFLDV------GLEPEALRYYF 358


>gi|126462982|ref|YP_001044096.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|126104646|gb|ABN77324.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 984

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   E+++        + A ++RL 
Sbjct: 637 QACGTKGRAPYRGVVTHGFTLDEKGMKMSKSLGNTVVPQEVID-------QYGADILRLW 689

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    +        + L        +   T
Sbjct: 690 VAQADFTVDQRIGKEILKGTADSYRRLRNT 719


>gi|296205178|ref|XP_002749648.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial isoform 2
           [Callithrix jacchus]
          Length = 522

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 255 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 304


>gi|289550579|ref|YP_003471483.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
 gi|289180111|gb|ADC87356.1| Valyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
          Length = 876

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 23/168 (13%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   +++E  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTERRPFQDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAV 351
                 + A  +R  +       P   + ++ +++      ++K W     S   I    
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGARFSLMNIGEDF 589

Query: 352 LSALYN-DL--NTVSA----IQALHKLARESTKNHDLLPIFNASAHIL 392
             A+ + DL  N   A    +  L++     T   D    F     +L
Sbjct: 590 --AVEDIDLSGNLSLADKWILTRLNETIETVTDLSDKYE-FGEVGRVL 634


>gi|254779703|ref|YP_003057809.1| valyl-tRNA synthetase [Helicobacter pylori B38]
 gi|254001615|emb|CAX29717.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS) [Helicobacter
           pylori B38]
          Length = 874

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 23/183 (12%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 508 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 560

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS-ALYNDLNTVS--- 363
                       I  +   L   +   +K     +   +   A       ++  T     
Sbjct: 561 ANLCATG---RDIKLSTTHLENNKNFANKIFNAVSYLKLKQEAFKDREHLDEYQTPLGRY 617

Query: 364 AIQALHKLARESTKNHDLLPIFNASA---HILGIEVCKE--HLNKNISIAIEKLVQERLI 418
           A   L+   +E+    D     +A+      L  E C      +K  + AI++L      
Sbjct: 618 AKSRLNSATKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSKVENEAIDELGSVLKE 677

Query: 419 LLK 421
            LK
Sbjct: 678 ALK 680


>gi|222152067|ref|YP_002561227.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
 gi|222121196|dbj|BAH18531.1| arginyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
          Length = 551

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 38/133 (28%), Gaps = 30/133 (22%)

Query: 14  KITEF---QAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           K  +F   +  D   +  YV   PT     HIG+AR   V D L  +L     +    Y 
Sbjct: 108 KKVDFGKGEPKDERILVEYVSANPT--GSLHIGHARNAAVGDTLSNVLSAAGYDVLREYY 165

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
            N                        I  +      +F++       L          H 
Sbjct: 166 IN-------------------DAGKQIENLAYSIEARFLQALGEDKALPADGY-----HG 201

Query: 130 PQMIYLIQNIILH 142
             +I + +++   
Sbjct: 202 KDIIEIGKDLAEK 214


>gi|74005480|ref|XP_850573.1| PREDICTED: similar to methionine-tRNA synthetase 2 precursor [Canis
           familiaris]
          Length = 593

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L+        +     R  +L
Sbjct: 326 GAGMSPPHRIYVHSHW-TVCGQKMSKSLGNVVDPKTCLDR-------YTVDGFRYFLL 375


>gi|28378904|ref|NP_785796.1| valyl-tRNA synthetase [Lactobacillus plantarum WCFS1]
 gi|254557109|ref|YP_003063526.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
 gi|81631055|sp|Q88UX7|SYV_LACPL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|28271741|emb|CAD64647.1| valine--tRNA ligase [Lactobacillus plantarum WCFS1]
 gi|254046036|gb|ACT62829.1| valyl-tRNA synthetase [Lactobacillus plantarum JDM1]
          Length = 889

 Score = 38.7 bits (89), Expect = 2.2,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 10/96 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I QS          N+ +H    +  G KMSKS GN I   +++E        + A  +R
Sbjct: 504 IFQSLEFTGRRPFKNVLLHGLIRDEHGVKMSKSLGNGIDPMDVIE-------KYGADALR 556

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             +    T   + + F+  ++  A   ++K    S 
Sbjct: 557 WFLSNGSTA-GQDVRFSYTKMDAAWNFINKIWNASR 591


>gi|331002911|ref|ZP_08326424.1| leucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
 gi|330413204|gb|EGG92578.1| leucyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str. F0167]
          Length = 804

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 54/136 (39%), Gaps = 24/136 (17%)

Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHE---------NEIAQSCCADRIEKTANIWIHNGFLN 272
           M+  YL    D++ GG++    H           N+I         E    ++ + G +N
Sbjct: 520 MADKYL--PVDMYIGGVEHAVLHLLYSRFYTKFLNDIGVVE---FDEPFTKLF-NQGMIN 573

Query: 273 -LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEA 330
             +G+KMSKS GN ++ ++L+       R +    +RL  + +       D+  + +   
Sbjct: 574 GSDGQKMSKSKGNVVSPDDLV-------RDYGCDALRLYELFVGPPELDADWDDRGIEGV 626

Query: 331 EILLSKWPQTSTSKGI 346
              L+K+ +       
Sbjct: 627 ARFLNKFYKLVMDNKD 642


>gi|326559611|gb|EGE10025.1| methionyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326565529|gb|EGE15700.1| methionyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
 gi|326567709|gb|EGE17815.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC1]
 gi|326568781|gb|EGE18851.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC8]
 gi|326575031|gb|EGE24960.1| methionyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 683

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/80 (28%), Positives = 28/80 (35%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA    H GFL + G KMSKS G FI     L 
Sbjct: 294 HFIGKDIVYFHSLFWPAMLEGAGYRTPTAVN-AH-GFLTVNGEKMSKSRGTFIKAETYLT 351

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 352 -------HLDPEYLRYYFAS 364


>gi|308467382|ref|XP_003095939.1| hypothetical protein CRE_06953 [Caenorhabditis remanei]
 gi|308244208|gb|EFO88160.1| hypothetical protein CRE_06953 [Caenorhabditis remanei]
          Length = 113

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 26/65 (40%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
             G DLI  H    +          K       NG L L   KMSKS GNF+T+ E +E 
Sbjct: 3   ASGKDLIGNHSTYLLFNPIWPTDTSKWPKGIRANGHLLLNNEKMSKSTGNFMTLEEAIEK 62

Query: 295 KKFGG 299
               G
Sbjct: 63  FSADG 67


>gi|304313810|ref|YP_003848957.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587269|gb|ADL57644.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
           Marburg]
          Length = 560

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  I+ D L R+LR    +    Y  N
Sbjct: 124 PNGPLHIGHIRNAIIGDSLARILRKAGYQVETQYYVN 160


>gi|225448593|ref|XP_002278465.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297736535|emb|CBI25406.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 5/45 (11%), Positives = 19/45 (42%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               + ++   ++ L  +R      + ++ AD +  ++   G+ +
Sbjct: 164 DPRESASVPGELQILAVQRAKARSERNYAKADALHDKIIDAGYRV 208


>gi|145588832|ref|YP_001155429.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047238|gb|ABP33865.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 556

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 63/171 (36%), Gaps = 33/171 (19%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 N++ H GFL ++G KMSKS G  I+ N ++E        +     R        
Sbjct: 319 GYRTPTNVFAH-GFLTVDGEKMSKSRGTLISANSVIEC------GFNPEWFRYYFATK-- 369

Query: 317 REPIDFTVQRLT------EAEI---LLSKWPQ-TSTSKGIIDPAV-----LSALYNDLNT 361
              ++ +++ L        A +   LL K+    S S G +          +A+ N L  
Sbjct: 370 ---LNDSMEDLDLNLQDFVARVNSDLLGKYINIASRSAGFLVKRFDGVVSDAAMSNPL-- 424

Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIEK 411
              +Q +   + +    ++      A   I+ + +     +++N    I K
Sbjct: 425 ---LQEIAAASEKIAGLYEAREYAKALRTIMDLADKVNAFVDENKPWEIAK 472


>gi|71415852|ref|XP_809978.1| methionyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
 gi|70874442|gb|EAN88127.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi]
          Length = 765

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 59/176 (33%), Gaps = 39/176 (22%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DIH  G D++  H     A    A          + +G+   + +K+SKS GN       
Sbjct: 503 DIHVIGKDILKFHAIYWPAFLISA--GLPLPKTIVAHGWWTKDRKKISKSLGNVF----- 555

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL-------------------TEAE 331
                   R +    ++  +L  T + +  D++ + +                   T A+
Sbjct: 556 --DPVEKAREFGFDALKYFLLRETGFSDDGDYSDRNMISRLNGELADTLGNLVMRCTSAK 613

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYN-----DL-----NTVSAIQALHKLARESTK 377
           I + +   T  +    D A++  + +     D      +   A+ A+  L R    
Sbjct: 614 INVHRVWPTPDAYNAKDEALIQLIKDLPGVVDHFFLIPDVQKALAAVFDLLRAINS 669


>gi|332707288|ref|ZP_08427341.1| methionyl-tRNA synthetase [Lyngbya majuscula 3L]
 gi|332354022|gb|EGJ33509.1| methionyl-tRNA synthetase [Lyngbya majuscula 3L]
          Length = 530

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 12/57 (21%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
             +GFL  +G+KM KS GN +   EL++        + A  IR   L     + I+F
Sbjct: 296 FGHGFLTKDGQKMGKSLGNTLDPVELVD-------KYGADAIRYYFL-----KEIEF 340


>gi|330835321|ref|YP_004410049.1| hypothetical protein Mcup_1462 [Metallosphaera cuprina Ar-4]
 gi|329567460|gb|AEB95565.1| conserved hypothetical protein [Metallosphaera cuprina Ar-4]
          Length = 307

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 43/110 (39%), Gaps = 17/110 (15%)

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           T  +L  +   + K  +    K ++D  VL     DLN +  + +LH +AR +       
Sbjct: 212 TEDQLQSSVKNMEKIAKLGLEKMVVDHHVLR----DLNYLKVLSSLHDVARSAGVK---- 263

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
                +A ILG+EV +    +      E   ++       K    AD +R
Sbjct: 264 --VTTAAEILGLEVRQLEAKRR-----ELFAKDNRPAKIPKN--LADLLR 304


>gi|317495673|ref|ZP_07954038.1| valyl-tRNA synthetase [Gemella moribillum M424]
 gi|316914126|gb|EFV35607.1| valyl-tRNA synthetase [Gemella moribillum M424]
          Length = 880

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           +  IH    + +GRKMSKS GN +   E++E  
Sbjct: 482 TGYDIIFFWVARMVFQGLEFTGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIE-- 539

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++  +   ++K    S 
Sbjct: 540 -----QYGADSLRYFLATNS--TPGQDLRYSTEKIEASWNYINKIWNASR 582


>gi|297669112|ref|XP_002812750.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like isoform 2
           [Pongo abelii]
          Length = 542

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I++H+ +  + G+KMSKS GN +     L         +     R  +L
Sbjct: 275 GAGMSPPQRIYVHSHW-TVCGQKMSKSLGNVVDPRTCLNR-------YTVDGFRYFLL 324


>gi|254496566|ref|ZP_05109434.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
 gi|254354190|gb|EET12857.1| leucyl-tRNA synthetase [Legionella drancourtii LLAP12]
          Length = 824

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 47/150 (31%), Gaps = 16/150 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
            K   F  + D +  + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  HKKQSFNVSEDLNKEKFYCLSMFPYPSGTLHMGHVRNYTIGDVIARYQRALG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRAT 126
           +N+             E+ +I      +  T KN +   K   RL             A 
Sbjct: 71  KNVLQPIGWDAFGLPAENAAIKNGIPPAEWTKKNIESMKKQFLRLGNAYDWRREICTCAP 130

Query: 127 NHIP-QMIYLIQNIILHGHAYEANNEIIFD 155
            +   +  + I  +   G  Y+ N  + +D
Sbjct: 131 EYYRWEQWFFI-RLFEKGLVYKKNAVVNWD 159



 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 8/72 (11%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTV 324
           +  G +  +G KMSKS GN +  N L++T       + A   RL  M  +   + ++++ 
Sbjct: 565 LTQGMVLKDGHKMSKSVGNVVDPNHLIDT-------YGADTARLFVMFASPPEQSLEWSD 617

Query: 325 QRLTEAEILLSK 336
             +  A   L +
Sbjct: 618 AGVEGAHRFLKR 629


>gi|163751574|ref|ZP_02158796.1| hypothetical protein KT99_01217 [Shewanella benthica KT99]
 gi|161328582|gb|EDP99735.1| hypothetical protein KT99_01217 [Shewanella benthica KT99]
          Length = 137

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 44/133 (33%), Gaps = 30/133 (22%)

Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE---------STKNHD 380
           A++ L        +   I+      L +D     AI  L K+ ++         +    +
Sbjct: 9   AKVRLGTIRMALAAVKQIEVDTRETLNDD----QAIAVLTKMVKQRRDSITQYSAAGRDE 64

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI-----------LLKMKKFSSAD 429
           L  I      +L + + K    + I + ++  ++E               LK K    AD
Sbjct: 65  LAAIEAEEIKVLEVFLPKPLTEEEIVVLVDASIEEMGASSMADMGKVMGALKPKVLGRAD 124

Query: 430 ------YIRKQLE 436
                  IR +L+
Sbjct: 125 MASIGAMIRAKLK 137


>gi|85860177|ref|YP_462379.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
 gi|109895044|sp|Q2LVV5|SYR_SYNAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|85723268|gb|ABC78211.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
          Length = 562

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  +V DV+  +L     E    Y  N
Sbjct: 139 PT--GPLHIGHARGAVVGDVIANILGMSGYEIFREYYIN 175


>gi|84489310|ref|YP_447542.1| valyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
 gi|84372629|gb|ABC56899.1| ValS [Methanosphaera stadtmanae DSM 3091]
          Length = 879

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 9/88 (10%)

Query: 254 CADRIEKTANIWIHNGFL-NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                +    I + NG +   +G KMSKS GN I   E++E        + A  +RL   
Sbjct: 506 ALTGEKPFDEI-VVNGMVFGEDGHKMSKSLGNVIAPEEVIE-------EYGADALRLWSA 557

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +     + F  + +  A   L K+   
Sbjct: 558 NSVPGADVPFGWKDIKHAYKFLRKFWNA 585


>gi|12045122|ref|NP_072933.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|2507608|sp|P47508|SYL_MYCGE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|3844862|gb|AAC71488.1| leucyl-tRNA synthetase [Mycoplasma genitalium G37]
 gi|166078891|gb|ABY79509.1| leucyl-tRNA synthetase [synthetic Mycoplasma genitalium JCVI-1.0]
          Length = 792

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 33/82 (40%), Gaps = 8/82 (9%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L  +G+KMSKS GN I    L+++         A  +RL ++ M      + +  + L  
Sbjct: 563 LGPDGKKMSKSKGNTINPTPLVDSHG-------ADALRLYLMFMGPISASLTWNDEGLNG 615

Query: 330 AEILLSKWPQTSTSKGIIDPAV 351
               L +      +  ++   V
Sbjct: 616 MRRWLDRVYNFFFNHAVVTDQV 637


>gi|320530417|ref|ZP_08031475.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
 gi|320137250|gb|EFW29174.1| valyl-tRNA synthetase [Selenomonas artemidis F0399]
          Length = 887

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   +++IH    + EGRKMSKS GN I   E++E        + A  +R  ++  
Sbjct: 507 FGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIE-------KYGADTLRFMLITG 559

Query: 315 HYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +   P   + F  +R+  A    +K    S 
Sbjct: 560 N--TPGNDMRFYWERVEAARNFANKIWNASR 588


>gi|300853478|ref|YP_003778462.1| leucyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
 gi|300433593|gb|ADK13360.1| leucyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
          Length = 810

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 49/134 (36%), Gaps = 16/134 (11%)

Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA--DRIEKTANIWI---HNGF-LNLE 274
           A     L    D++ GG +    H       +              ++   H G  L  +
Sbjct: 510 AKIDKML--PVDMYVGGPEHACMHLLYARFITKALRDMGFLDFDEPFLSLRHQGIILGPD 567

Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEIL 333
           G+KMSKS GN I+ ++ +       + + + V R+ ++    Y E   +    +      
Sbjct: 568 GQKMSKSKGNTISPDDCI-------QEYGSDVFRMYLMFGFDYSEGGAWNDDGIKSISKF 620

Query: 334 LSKWPQTSTSKGII 347
           + +  +T +S   I
Sbjct: 621 VDRIERTISSVKEI 634


>gi|297250326|ref|ZP_06864102.2| leucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
 gi|296839199|gb|EFH23137.1| leucine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
          Length = 878

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGKAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 774


>gi|296331119|ref|ZP_06873593.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674274|ref|YP_003865946.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296151763|gb|EFG92638.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412518|gb|ADM37637.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 921

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 SSVDYQADVRVSDAILKQVAEVYRKIRNT 650


>gi|302507938|ref|XP_003015930.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
 gi|291179498|gb|EFE35285.1| hypothetical protein ARB_06242 [Arthroderma benhamiae CBS 112371]
          Length = 1012

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 61/205 (29%), Gaps = 45/205 (21%)

Query: 249 IAQSCCADRIEKTANIWI----HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP- 303
           I+              +     H   L+  GRKMSKS GN I  +E++            
Sbjct: 600 ISHQLAEGGKSSFKAPFKTLITHGFTLDQYGRKMSKSIGNTIQPDEIMGGTLLPPLKPKK 659

Query: 304 -------------------APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------ 338
                                 +RL    + Y + +    Q L    I L K+       
Sbjct: 660 IKGKGPKPNPDVPVYDALGPDALRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLL 719

Query: 339 ----QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
               Q    +  +    L A+        A+  LH L + S +  D +  F A   +   
Sbjct: 720 LGALQDFDPRNEVPYESLHAIDK-----IALVQLHNLVKSSQEAVDKMEFFKAVTAM--- 771

Query: 395 EVCKEHLNKNISIAIEKLVQERLIL 419
               +  N   S    + +++RL  
Sbjct: 772 ---NKWANLEFSAFYIEAIKDRLYA 793


>gi|299748517|ref|XP_001839197.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130]
 gi|298408008|gb|EAU82630.2| methionine-tRNA synthetase [Coprinopsis cinerea okayama7#130]
          Length = 516

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 48/147 (32%), Gaps = 43/147 (29%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFT 323
           + +    +  +KMSKS GN +   + ++        +   ++R  +  +   +R+ +D++
Sbjct: 293 LTHAHWTVSQQKMSKSVGNVVDPMQSVD-------KYGLDIVRFYLARVGGRFRDDVDWS 345

Query: 324 VQRLTEAEILLSKW---------------------------------PQTSTSKGIIDPA 350
            ++L +    L                                     + +     +   
Sbjct: 346 FEQLEKHSKELQSLLGNYLLRITSARITAAAAAGYEQQSEASPHALNLELAREVDALPRR 405

Query: 351 VLSALYNDLNTVSAIQALHKLARESTK 377
           V   + N L    A+ ++  + + + K
Sbjct: 406 VQELMNN-LEVADALSSILDVLKLANK 431


>gi|221309417|ref|ZP_03591264.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221313742|ref|ZP_03595547.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221318666|ref|ZP_03599960.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221322939|ref|ZP_03604233.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|255767358|ref|NP_389426.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|239938843|sp|Q45477|SYI_BACSU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225184985|emb|CAB13417.2| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 921

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 SSVDYQADVRVSDAILKQVAEVYRKIRNT 650


>gi|167742103|ref|ZP_02414877.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
          Length = 372

 Score = 38.7 bits (89), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 163 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 215

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 216 RRQRAFVARLWAFVHRVAETEAGIAAAHD 244


>gi|327298613|ref|XP_003234000.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
 gi|326464178|gb|EGD89631.1| isoleucyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
          Length = 1012

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 58/183 (31%), Gaps = 41/183 (22%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP--------------------APV 306
           H   L+  GRKMSKS GN I  +E++                                  
Sbjct: 622 HGFTLDQYGRKMSKSIGNTIQPDEIMGGTLLPPLKPKKIKGKGPKPNPDVPVYDALGPDA 681

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLSALY 356
           +RL    + Y + +    Q L    I L K+           Q    +  +    L A+ 
Sbjct: 682 LRLWAAGSDYTKDVVIGQQVLKAVNISLHKFRVTFKLLLGALQDFDPRNEVPYESLHAID 741

Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQER 416
                  A+  LH L + S +  D +  F A   +       +  N   S    + +++R
Sbjct: 742 K-----IALVQLHNLVKSSQEAVDKMEFFKAVTAM------NKWANLEFSAFYIEAIKDR 790

Query: 417 LIL 419
           L  
Sbjct: 791 LYA 793


>gi|163813949|ref|ZP_02205343.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
 gi|158450819|gb|EDP27814.1| hypothetical protein COPEUT_00102 [Coprococcus eutactus ATCC 27759]
          Length = 920

 Score = 38.3 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 16/143 (11%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                  ++ IH    + +GRKMSKS GN I   E+++        + A  +RL ++  +
Sbjct: 544 TGKSPFKHVLIHGLVRDDQGRKMSKSLGNGIDPLEVID-------KYGADALRLTLITGN 596

Query: 316 YREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSAL-YNDLNTVS--AIQAL 368
              P   + F  +R+  +    +K W  T      ++ A  SA+  +DL       +  +
Sbjct: 597 --APGNDMRFYWERVENSRNFANKIWNATRFIMMNMEKADFSAVKLSDLTIADRWILSKV 654

Query: 369 HKLARESTKNHDLLPIFNASAHI 391
           + LA+E T N +   +  A + +
Sbjct: 655 NTLAKEMTDNMEKFELGIAVSKV 677


>gi|319789620|ref|YP_004151253.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
 gi|317114122|gb|ADU96612.1| isoleucyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
          Length = 936

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN ++  +++       + + A ++RL +
Sbjct: 577 SCGTRGKAPYRAVLTHGFTLDEKGLKMSKSLGNVVSPTDVV-------KRYGADILRLWV 629

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
              ++ E +  +   L     +  K   T
Sbjct: 630 ASENFTEDVRISDNILRGVAEVYKKIRNT 658


>gi|296284593|ref|ZP_06862591.1| valyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 922

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
              +    +++H      +G KMSKS GN +    L++        + A  +R  M
Sbjct: 541 TGQKPWEKLYLHGLVRAADGSKMSKSKGNVVDPLILID-------QYGADALRFFM 589


>gi|292669954|ref|ZP_06603380.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
 gi|292648425|gb|EFF66397.1| valine-tRNA ligase [Selenomonas noxia ATCC 43541]
          Length = 904

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   +++IH    + EGRKMSKS GN I   E++E        + A  +R  ++  
Sbjct: 524 FGGDVPFRDVFIHGLVRDSEGRKMSKSLGNGIDPVEVIE-------KYGADTLRFMLITG 576

Query: 315 HYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +   P   + F  +R+  A    +K    S 
Sbjct: 577 N--TPGNDMRFYWERVEAARNFANKIWNASR 605


>gi|294668710|ref|ZP_06733803.1| leucine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
 gi|291309227|gb|EFE50470.1| leucine--tRNA ligase [Neisseria elongata subsp. glycolytica ATCC
           29315]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|257063800|ref|YP_003143472.1| isoleucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
 gi|256791453|gb|ACV22123.1| isoleucyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
          Length = 952

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ++  G KMSKS GN I   ++ +       ++ A V+RL +  T Y   +      L   
Sbjct: 615 VDENGEKMSKSKGNGIDPKQVAD-------AYGADVLRLWVASTDYSVDVSIGDTILKRT 667

Query: 331 EILLSKWPQT 340
                ++  +
Sbjct: 668 SDAYRRFRNS 677


>gi|52078533|ref|YP_077324.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|52783895|ref|YP_089724.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
 gi|319648562|ref|ZP_08002776.1| MetS protein [Bacillus sp. BT1B_CT2]
 gi|52001744|gb|AAU21686.1| methionyl-tRNA synthetase MetS [Bacillus licheniformis ATCC 14580]
 gi|52346397|gb|AAU39031.1| MetS [Bacillus licheniformis ATCC 14580]
 gi|317389329|gb|EFV70142.1| MetS protein [Bacillus sp. BT1B_CT2]
          Length = 662

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +     VR +T  D+      + +  +   N     +
Sbjct: 22  HIGHAYTTVAGDAMARYKRLRGFD-----VRYLTGTDEH---GQKIQQTAEKENITPQEL 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
             +  +   +   +L         R T   H   +  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAAEDIQQLWKKLDISNDDF-IRTTEERHKKVIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|30249126|ref|NP_841196.1| leucyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
 gi|48428538|sp|Q820M7|SYL_NITEU RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|30138743|emb|CAD85050.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Nitrosomonas
           europaea ATCC 19718]
          Length = 869

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 41/139 (29%), Gaps = 15/139 (10%)

Query: 23  PSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P   + Y      Y     H+G+ R   + DVL R  R          V      D   +
Sbjct: 30  PDRPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRYRRMQGYN-----VMQPMGWDAFGL 84

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ--- 137
                E+ +I      +  T  N          L       +  AT   PQ     Q   
Sbjct: 85  PA---ENAAIQKGVPPAKWTYDNIAYMRSQLQSLGFAIDWQRELAT-CDPQYYRWNQWLF 140

Query: 138 -NIILHGHAYEANNEIIFD 155
             ++  G AY+    + +D
Sbjct: 141 LRMLEKGIAYQKTQVVNWD 159


>gi|332559015|ref|ZP_08413337.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332276727|gb|EGJ22042.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 978

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   E+++        + A ++RL 
Sbjct: 631 QACGTKGRAPYRGVVTHGFTLDEKGMKMSKSLGNTVVPQEVID-------QYGADILRLW 683

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    +        + L        +   T
Sbjct: 684 VAQADFTVDQRIGKEILKGTADSYRRLRNT 713


>gi|330718662|ref|ZP_08313262.1| isoleucyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
          Length = 930

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 59/160 (36%), Gaps = 16/160 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + +    N+      ++  G KMSKS GN I+  E+ +            ++RL  
Sbjct: 572 SVAVNGVAPYKNVISQGFTMDQNGNKMSKSLGNTISPLEVADKMGI-------EILRLWT 624

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AI 365
           +       +  +   L +      K   T      +    +P   S  Y+DL        
Sbjct: 625 VTVDTSADMPVSNDILKQVSESYRKIRNTLRFLLANTTDFNPETDSVAYDDLAAHDQYFY 684

Query: 366 QALHKLARESTKNHD---LLPIFNASAHILGIEVCKEHLN 402
             L++L ++  + +D      +FN   + + +++   +L+
Sbjct: 685 TLLNELVKDVRQAYDTYQFKAVFNRLINFINVDLSAFYLD 724


>gi|259417508|ref|ZP_05741427.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
 gi|259346414|gb|EEW58228.1| leucyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
          Length = 881

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 32/119 (26%), Gaps = 11/119 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+ R          V +              A                
Sbjct: 48  HMGHVRNYTMGDVIARY--KLSTGHNVLHPMGFDAFGMPAENAAMASGGH------PKDW 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           T  N    V+    L       +  AT    +  Q   L  + +  G  Y  N  + +D
Sbjct: 100 TYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVYRKNAVVNWD 158



 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 43/123 (34%), Gaps = 19/123 (15%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++ T       + A   R  +L      P    +++T      A 
Sbjct: 651 AKMSKSKNNVVDPLAIIST-------YGADTARWFVLS---DSPPERDVEWTASGAEAAY 700

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
             L++        G +DP        DL     ++ +HK  R+ T   +      A A +
Sbjct: 701 KHLNRVWNLCDRIGEMDPDAKGEGDEDL-----LREMHKAIRDVTLGVESFGFNAAIAKL 755

Query: 392 LGI 394
            G 
Sbjct: 756 YGF 758


>gi|167914394|ref|ZP_02501485.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
          Length = 381

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 172 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 224

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 225 RRQRAFVARLWAFVHRVAETEAGIAAAHD 253


>gi|110799770|ref|YP_695110.1| leucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|168209961|ref|ZP_02635586.1| leucyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
 gi|122959040|sp|Q0TTD0|SYL_CLOP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110674417|gb|ABG83404.1| leucyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
 gi|170711965|gb|EDT24147.1| leucyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
          Length = 816

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND----- 358
             +      + +  +              +K  +D A           + ++ +D     
Sbjct: 618 DGIKSVNRFVERIERIIDTAREAISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQ 677

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A     I AL K  +E   N D L 
Sbjct: 678 FNTAIARMMEFINALSKYTQEKEMNLDFLK 707


>gi|321315308|ref|YP_004207595.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320021582|gb|ADV96568.1| isoleucyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 921

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 SSVDYQADVRVSDAILKQVAEVYRKIRNT 650


>gi|293603629|ref|ZP_06686050.1| glutamine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
 gi|292818065|gb|EFF77125.1| glutamine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
          Length = 599

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 21/119 (17%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+ +    V + L R + G   + +     + +D+    A  E      
Sbjct: 69  PEPNGYLHIGHAKSIC---VNFGLARDFGGVCHLRFDDTNPEKEDQEYVDAIIEAVRWLG 125

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
            D  +         +                 A+++   M    + ++  GHAY     
Sbjct: 126 FDWKA--ADGKENLYF----------------ASDYFGYMYEFAEALVEAGHAYVDEQS 166


>gi|291484095|dbj|BAI85170.1| isoleucyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 921

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 SSVDYQADVRVSDAILKQVAEVYRKIRNT 650


>gi|291166072|gb|EFE28118.1| valine--tRNA ligase [Filifactor alocis ATCC 35896]
          Length = 885

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              +++IH    + +GRKMSKS GN I   E+++        + A  +R  +  ++   P
Sbjct: 512 PFKDVFIHGLVRDDQGRKMSKSLGNGIDPLEIID-------HYGADALRFMLASSN--TP 562

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F ++R+  A    +K    S 
Sbjct: 563 GNDMRFYMERVESARNFANKLWNASR 588


>gi|288906268|ref|YP_003431490.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325979280|ref|YP_004288996.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732994|emb|CBI14575.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
 gi|325179208|emb|CBZ49252.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 485

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 77/456 (16%), Positives = 145/456 (31%), Gaps = 86/456 (18%)

Query: 23  PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---- 77
           P  IR+ Y   PT     HIGNAR  +     Y   R++ G+    +V  I D D     
Sbjct: 2   PKKIRVRYAPSPT--GLLHIGNARTALF---NYLYARHHGGD----FVIRIEDTDRKRHV 52

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           +  ER++ E+      D       +  +++ +                +  +      I 
Sbjct: 53  EDGERSQLENLKWLGMDWDESP--QTHEKYRQ----------------SERLDIYQKYID 94

Query: 138 NIILHGHA---YEANNEIIFDTSSIPNYGSFSR-----RKIDEQKMGTRVPEKYHKKNPA 189
            ++  G A   Y    E+  +       G   R       + E +    + E+  K    
Sbjct: 95  QLLAEGKAYKSYVTEEELAAERERQEAAGETPRYINEFLGMSEDEKAAYIAEREAKGIVP 154

Query: 190 DFIL---------WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-LGKVFDIHGGGLD 239
              L         W      +  +E   G     W I+       Y    V D H   + 
Sbjct: 155 TVRLAVNESGIYKWHDIVKGDIEFEG--GNIGGDWVIQKKDGYPTYNFAVVIDDHLMEIS 212

Query: 240 LIFP---HHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLET 294
            +     H  N   Q    + +   A  + H   +  +  G+K+SK + N      L   
Sbjct: 213 HVIRGDDHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNT-----LQFI 267

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           + +  + +    +   + +  +    +   F+ + L    I L    + S S    D   
Sbjct: 268 EDYRKKGYMPEAVFNFIALLGWNPGGEDEIFSREEL----IKLFDENRLSKSPAAFDQKK 323

Query: 352 LSALYN------DLNTVSAIQA--LHKLARESTKNHDLLPI----FNASAHILGI-EVCK 398
           +  + N      D +T+ A+    L +  R + K   L+ +      +   I+ + ++  
Sbjct: 324 MDWMSNEYIKNADFDTIFAMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFF 383

Query: 399 EHLNKNISIAIEKLVQE----RLILLKMKKFSSADY 430
           E   +      E +  E     L   K K  + +D 
Sbjct: 384 EDFPELTDAEKEFMAGETVPTVLEAFKAKLEAMSDE 419


>gi|221640006|ref|YP_002526268.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|221160787|gb|ACM01767.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 999

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   E+++        + A ++RL 
Sbjct: 652 QACGTKGRAPYRGVVTHGFTLDEKGMKMSKSLGNTVVPQEVID-------QYGADILRLW 704

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    +        + L        +   T
Sbjct: 705 VAQADFTVDQRIGKEILKGTADSYRRLRNT 734


>gi|199598149|ref|ZP_03211571.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
 gi|199590910|gb|EDY98994.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
          Length = 928

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  I     I      L+ +GRKMSKS GN I  + +        + + A +IRL +
Sbjct: 568 SVAATGIAPYRGILSQGFTLDGKGRKMSKSLGNTIVPSTI-------EKQFGAEIIRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---- 363
                   +  +V    +      K   T      + G  DP   +  Y+ L +V     
Sbjct: 621 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTLRFMVANTGDFDPEKDAVAYDQLGSVDRYLL 680

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             +  +    +E+   +D   +    +  L  ++   +L+    +  IE 
Sbjct: 681 VRLNQIIAKVKEAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEA 730


>gi|219670367|ref|YP_002460802.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
 gi|219540627|gb|ACL22366.1| valyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
          Length = 881

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               + IH   L+ +GRKMSKS GN +   E+++        + A  +R  ++  +   P
Sbjct: 510 PFQKVMIHGLVLDAQGRKMSKSLGNGVDPLEVID-------QYGADTLRFMLITGN--TP 560

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +RL       +K    S 
Sbjct: 561 GNDLRFHPERLEATRNFANKIWNASR 586


>gi|13508123|ref|NP_110072.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
 gi|2501026|sp|P75398|SYL_MYCPN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|1674141|gb|AAB96101.1| leucyl-tRNA synthetase [Mycoplasma pneumoniae M129]
          Length = 793

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 63/186 (33%), Gaps = 24/186 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHH------ENEIAQSCCADRIEKTANIWIHNGFLN-LEGR 276
             YL    D++ GG +    H          + Q       E    + I+ G +   +G+
Sbjct: 512 ERYL--PVDLYVGGAEHAVLHLLYARFWHQFLYQKGIVTTKEPFKKL-INQGMVLGPDGK 568

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLS 335
           KMSKS GN I    L+++         A  +RL ++ M      + +    L      L 
Sbjct: 569 KMSKSKGNTINPTPLIDSHG-------ADALRLYLMFMGPISAALTWLDDGLNGMRRWLD 621

Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
           +       + II   V      D  TV       K + E  +  +L  + +     L + 
Sbjct: 622 RVHNFFHKENIIKETV------DQETVYGYNLFLKRSFEHLEKQELNLVISQMMIFLNLL 675

Query: 396 VCKEHL 401
              + L
Sbjct: 676 YKTKQL 681


>gi|146276551|ref|YP_001166710.1| isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|145554792|gb|ABP69405.1| Isoleucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 977

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 7/90 (7%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN +   E+++        + A ++RL 
Sbjct: 630 QACGTKGRAPYRGVVTHGFTLDEKGMKMSKSLGNTVVPQEVID-------QYGADILRLW 682

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +    +        + L        +   T
Sbjct: 683 VAQADFTVDQRIGKEILKGTADSYRRLRNT 712


>gi|307352773|ref|YP_003893824.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
 gi|307156006|gb|ADN35386.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
          Length = 554

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 19/52 (36%)

Query: 20  AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
              P  I +           H+G+ R  ++ D L R+LR       V Y  N
Sbjct: 103 PQKPGRICLEHTSANPNGPLHVGHIRNSVIGDTLSRVLRKAGYTLEVEYYVN 154


>gi|260576671|ref|ZP_05844658.1| isoleucyl-tRNA synthetase [Rhodobacter sp. SW2]
 gi|259021156|gb|EEW24465.1| isoleucyl-tRNA synthetase [Rhodobacter sp. SW2]
          Length = 984

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 13/75 (17%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q+C          +  H   L+ +G KMSKS GN I   E++       + + A ++RL 
Sbjct: 637 QACGTKGRAPYRGVLTHGFTLDEKGMKMSKSLGNTIGPEEII-------KEYGADILRLW 689

Query: 311 MLMTHYREPIDFTVQ 325
           +         DFTV 
Sbjct: 690 VAQA------DFTVD 698


>gi|308802976|ref|XP_003078801.1| methionyl-tRNA synthetase of possible bacterial origi (ISS)
           [Ostreococcus tauri]
 gi|116057254|emb|CAL51681.1| methionyl-tRNA synthetase of possible bacterial origi (ISS)
           [Ostreococcus tauri]
          Length = 700

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 60/180 (33%), Gaps = 41/180 (22%)

Query: 233 IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITIN 289
           +H  G D+I+ H         C       +       +GF+   +G+KMSKS GN +  N
Sbjct: 277 VHIIGKDIIWFH----CVIWPCMLWSAGLQLPKTVFGHGFVTAEDGQKMSKSIGNVVDPN 332

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRL---TEAE------ILLSKWPQ 339
            +LE        + +   R  ++    Y   I F+   +     A+       L+ +   
Sbjct: 333 VVLE-------KFSSDTFRYYLMRCGVYGSDIPFSEAAMVSIHNADLADVIGNLVHRVTN 385

Query: 340 T-----------STSKGIID-----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
                         ++ I D         +A+    N  +A +A  +  + + K      
Sbjct: 386 LCNKSCGGVVPDCATEDIFDVLAVRARSEAAMA-KFNIQAACEAAIEAVKATNKYLTDAA 444


>gi|32266208|ref|NP_860240.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
 gi|81666101|sp|Q7VI99|SYR_HELHP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|32262258|gb|AAP77306.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
          Length = 548

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 28/82 (34%), Gaps = 3/82 (3%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     HIG+AR  +  D L R+ R+   +    Y  N       ++  +        I
Sbjct: 133 PT--GPLHIGHARGAVYGDALTRVGRFLGYDILTEYYINDAGAQIYMLGLSIFLAGREHI 190

Query: 93  NDAISIITSKNTQ-QFVKDTTR 113
                       + +++ D  +
Sbjct: 191 LKTQVEYPQSYYKGEYIIDLAK 212


>gi|291459301|ref|ZP_06598691.1| transketolase [Oribacterium sp. oral taxon 078 str. F0262]
 gi|291418555|gb|EFE92274.1| transketolase [Oribacterium sp. oral taxon 078 str. F0262]
          Length = 660

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 8/82 (9%)

Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
                  +P    +I +M   +         + +            +Y   +  K D ++
Sbjct: 258 GSEKAHGEPLGEENIVKMKEFLH--------WPSQEPFYVPAEVYTHYRELAESKRDAER 309

Query: 175 MGTRVPEKYHKKNPADFILWKR 196
              R  E Y  + P  + LWKR
Sbjct: 310 SWQRKMEDYRGRFPELYALWKR 331


>gi|225554709|gb|EEH03004.1| leucyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
          Length = 965

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 55/189 (29%), Gaps = 31/189 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DVL R  ++  G   +  +    D      E A  E    P 
Sbjct: 73  PYPSGALHLGHVRVYTISDVLSRF-KHMKGYDVLHPMG--WDAFGLPAENAAIERGIDPA 129

Query: 93  NDAISIITSKNT------QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
              +  I +          +F  D   L   +P        H  ++  +   +   G AY
Sbjct: 130 KWTMQNIANMKEQLRAIGARFDWDRE-LMTCSPEFY----KHTQRIFLM---LYQEGLAY 181

Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF---------ILWKR 196
           +A   +              +  ++D      R   K  K     +          L K 
Sbjct: 182 QAKARVNYDPIDKT----VLANEQVDANGCSWRSGAKVEKLELKQWFFRITAFKEALLKD 237

Query: 197 STPMEPGWE 205
              +E GW 
Sbjct: 238 LESLEAGWP 246


>gi|114572732|ref|XP_001172641.1| PREDICTED: mitochondrial isoleucine tRNA synthetase isoform 1 [Pan
           troglodytes]
          Length = 928

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I    ++   +   +   + A V+R 
Sbjct: 639 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPAVVVNGGQDQSKEPPYGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 699 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 729


>gi|114572728|ref|XP_514209.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial isoform 3 [Pan
           troglodytes]
          Length = 1012

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I    ++   +   +   + A V+R 
Sbjct: 639 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPAVVVNGGQDQSKEPPYGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 699 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 729


>gi|114572730|ref|XP_001172664.1| PREDICTED: mitochondrial isoleucine tRNA synthetase isoform 2 [Pan
           troglodytes]
          Length = 981

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S  A +      + +H   L  +G KMSKS GN I    ++   +   +   + A V+R 
Sbjct: 639 SVAARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPAVVVNGGQDQSKEPPYGADVLRW 698

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   +SK   T
Sbjct: 699 WVADSNVFTEVAIGPSVLNAARDDISKLRNT 729


>gi|15669567|ref|NP_248380.1| glutamyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|2500977|sp|Q58772|SYE_METJA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|1592022|gb|AAB99384.1| glutamyl-tRNA synthetase (gltX) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 553

 Score = 38.3 bits (88), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 37/117 (31%), Gaps = 27/117 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      HIG+AR  ++ D         YG K              +I R     P   +
Sbjct: 98  PNPSGPLHIGHARAAVLND----YFVKKYGGK--------------LILRLEDTDPKRVL 139

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
            +A  +I         +D   L         + ++ I       + +I  GHAY  +
Sbjct: 140 PEAYDMI--------KEDLDWLGVKVDEVVIQ-SDRIELYYEYGRKLIEMGHAYVCD 187


>gi|299119293|gb|ADJ11449.1| GA17300 [Drosophila miranda]
 gi|299119299|gb|ADJ11452.1| GA17300 [Drosophila miranda]
 gi|299119301|gb|ADJ11453.1| GA17300 [Drosophila miranda]
          Length = 134

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 47/141 (33%), Gaps = 37/141 (26%)

Query: 239 DLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           DLI  H      N  A         K       NG L L   KMSKS+GNF+T+ + +E 
Sbjct: 2   DLINNHLTFTLYNHAAIW--PKDDTKWPKGMRVNGHLQLNSAKMSKSDGNFLTLTDAVEK 59

Query: 295 KKFGGRS-------------------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
               G                       A ++RL          I++  + L E +  L 
Sbjct: 60  FSADGMRLCLADAGDSIEDANFVVSTADAGILRLFTF-------IEWVKEML-ETKSTLR 111

Query: 336 KWPQTSTSKGIIDPAVLSALY 356
           K      +K   D   LS L 
Sbjct: 112 K----GAAKTFNDQVFLSELN 128


>gi|262376740|ref|ZP_06069968.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
 gi|262308450|gb|EEY89585.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
          Length = 686

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    +      NGFL + G+KMSKS G FI     LE
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPSGL--FVNGFLTVNGQKMSKSRGTFIKAETYLE 346

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 347 -------HLNPEYLRYYFAS 359


>gi|229816837|ref|ZP_04447119.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
           20098]
 gi|229785853|gb|EEP21967.1| hypothetical protein BIFANG_02085 [Bifidobacterium angulatum DSM
           20098]
          Length = 881

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 9/91 (9%)

Query: 361 TVSAIQALHKLA-------RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           T SAIQA  +L+       R   K  DL+    A   I  + +  E   K +   + KL 
Sbjct: 376 TDSAIQAAAELSSRYIQDRRLPDKAIDLIDEAGARLRIKRLTMPPEL--KELEAKVAKLS 433

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILED 444
            E+   +K + F  A  +R  LE     L+D
Sbjct: 434 AEKEQAVKDQDFEKAADMRDDLEKLQTELKD 464


>gi|160947731|ref|ZP_02094898.1| hypothetical protein PEPMIC_01666 [Parvimonas micra ATCC 33270]
 gi|158446865|gb|EDP23860.1| hypothetical protein PEPMIC_01666 [Parvimonas micra ATCC 33270]
          Length = 809

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 35/205 (17%), Positives = 65/205 (31%), Gaps = 33/205 (16%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGR 276
           +  Y     D + GG++    H                 +  E       H   L   G 
Sbjct: 528 ALKYF-NQVDWYNGGMEHTTLHLLYSRFWHKFLYDIGVVNTKEPYLKRTSHGMILGENGE 586

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLS 335
           KMSKS GN +  +E+++        + A  +R   M +  +     ++   +      L 
Sbjct: 587 KMSKSRGNVVNPDEMID-------KYGADALRCYEMFLGDFERSASWSDGGINGCRKFLD 639

Query: 336 K---WPQTSTSKGIIDPAVLSAL-------YND-----LNTVSAIQALHKLARESTKNHD 380
           +     + + S   +  ++  ++         D      NT  AI AL  L  E     +
Sbjct: 640 RVWKLQEITNSSEEMTKSLEKSIHKTIKKVSEDFESLKFNT--AIAALMTLINEFYSVKE 697

Query: 381 LLPIFNASAHILGIEVCKEHLNKNI 405
           +         IL +     H+ + I
Sbjct: 698 ISREDLRIFLIL-LNPVSPHITEEI 721


>gi|325290585|ref|YP_004266766.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
 gi|324965986|gb|ADY56765.1| valyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
          Length = 892

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I              + IH   L+ +GRKMSKS GN +   E++
Sbjct: 495 VLVTGRDIIFFWVARMIFMGMEFMGEVPFHQVMIHGLILDAQGRKMSKSLGNGVDPLEVI 554

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +        + A  +R  ++  +   P   + F  ++L  +   ++K    S 
Sbjct: 555 DR-------YGADTLRFTLITGN--TPGNDLRFHSEKLEASRNFVNKIWNASR 598


>gi|310689727|pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With
           Methionyladenylate And Pyrophosphate
          Length = 564

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 31/179 (17%)

Query: 10  TLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           +++++   F         +Y     V    HIG+    ++ DVL R  R    E    +V
Sbjct: 21  SMKKQKVFFATTP-----IYY----VNASPHIGHVYSTLIVDVLGRYHRVKGEE---VFV 68

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK---DTTRLACLAPTHQPRAT 126
              TD   + +  A  +    P+ D  + ++S+  Q F +   D          +  R T
Sbjct: 69  MTGTDEHGQKVAEAAAKQGVSPM-DFTTSVSSEFKQCFQEMNYDM--------NYFIRTT 119

Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           N  P    L+Q+I     A     +I         + S S       +      ++  K
Sbjct: 120 N--PTHEKLVQDIWKKLAA---KGDIYL--GKYEGWYSVSDESFLTAQNVADGVDRDGK 171


>gi|307718100|ref|YP_003873632.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
 gi|306531825|gb|ADN01359.1| leucyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
          Length = 809

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 43/148 (29%), Gaps = 18/148 (12%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVYDFA---HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
             +     P   R YV     Y  A   H+G+       D+  R LR    +  V +   
Sbjct: 26  KED--PSIPKEKRRYVLDMFPYPSAEGLHVGHPEGYTATDIYCRYLRMRGYQ--VLHPMG 81

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
                      A      I       I T +N ++F      L       +  AT H P+
Sbjct: 82  FDSFGLPAEIYA------ITTGTHPRITTERNIERFRTQIQSLGFSYDWDREIAT-HRPE 134

Query: 132 MIYLIQ----NIILHGHAYEANNEIIFD 155
                Q     +   G AY A   + F 
Sbjct: 135 YYKWTQWMFLKMYEMGLAYMAEVPVWFC 162


>gi|292656002|ref|YP_003535899.1| lysyl-tRNA synthetase [Haloferax volcanii DS2]
 gi|291371664|gb|ADE03891.1| lysyl-tRNA synthetase [Haloferax volcanii DS2]
          Length = 555

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 8/75 (10%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
           +   +  L G  +S S GN +T+ E+L+  +         V+R    +   R+  D  + 
Sbjct: 308 MVYEWFTLNGEALSSSAGNIVTVAEMLDLLE-------PEVLRYFFALNP-RKARDLDLT 359

Query: 326 RLTEAEILLSKWPQT 340
           RL +      ++ + 
Sbjct: 360 RLDQLVDDFDRFERA 374


>gi|269219273|ref|ZP_06163127.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269211420|gb|EEZ77760.1| methionine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 604

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 37/149 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTV-- 324
           + FL +EG+K S S    I + ++L         +    +R  + +        DFT   
Sbjct: 346 SEFLTMEGKKFSSSKNVVIYVRDVLSR-------YQPDALRYFISIAGPESSDADFTWAE 398

Query: 325 -------QRLTEAEILLSKWPQ----------TSTSKGIIDPAVLSALYNDLNTVS---- 363
                  + +     L+++             T      +D  +L A+ N   TV     
Sbjct: 399 FVRRNNSELVAGWGNLVNRTAAMIAKNFGEIPTPGQPEEVDAELLDAVRNGFATVGESIA 458

Query: 364 ------AIQALHKLARESTKNHDLLPIFN 386
                 A+  + +L  E+         F 
Sbjct: 459 NHGQRAALTEIMRLVGEANAYVAKTEPFK 487


>gi|258577351|ref|XP_002542857.1| hypothetical protein UREG_02373 [Uncinocarpus reesii 1704]
 gi|237903123|gb|EEP77524.1| hypothetical protein UREG_02373 [Uncinocarpus reesii 1704]
          Length = 614

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 67/204 (32%), Gaps = 45/204 (22%)

Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL--------LETKKFG 298
           N++A+S           +  H   L+  GRKMSKS GN I  +E+        L+ KK  
Sbjct: 215 NQLAKSSNGIFRAPFKTLVTHGFTLDQSGRKMSKSIGNIIHPHEIMNGTLLPPLKIKKTK 274

Query: 299 GRSWP----------APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           G                 +RL +  + Y + +    Q L      L K+  T        
Sbjct: 275 GSKGEPTAPVYDALGPDALRLWVAGSDYTKDVAIGKQILKATNGSLHKYRVTFKL----- 329

Query: 349 PAVLSALYNDLN----TV---------SAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
             +L AL  D +                A+  L  L     +  + L  F A   I    
Sbjct: 330 --ILGALQ-DFDPKSQVPYESLRATDKIALSQLRSLVLTCQEAFENLEFFKAVTAI---- 382

Query: 396 VCKEHLNKNISIAIEKLVQERLIL 419
                 N + S    + +++RL  
Sbjct: 383 --NRWANADFSAFYIESIKDRLYA 404


>gi|189030335|sp|A9M162|SYL_NEIM0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 876

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772



 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGF--AIDWA 122

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 123 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159


>gi|169829404|ref|YP_001699562.1| valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168993892|gb|ACA41432.1| Valyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
          Length = 881

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 55/151 (36%), Gaps = 16/151 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            K+ P D   W +   +   W S   W     GW  E +     Y      +   G D+I
Sbjct: 432 GKEAPVDAENWTQDEDVLDTWFSSALWPFSTMGWPDEANEEYKRYYPTNTLV--TGYDII 489

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F      I Q           ++ IH    + EGRKMSKS GN +   +++E        
Sbjct: 490 FFWVSRMIFQGLEFTEQRPFKDVLIHGLVRDGEGRKMSKSLGNGVDPMDVIE-------Q 542

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTE 329
           + A  +R  +       P   + +T +++  
Sbjct: 543 YGADSLRYFLATGS--SPGQDLRYTTEKVEA 571


>gi|52630188|gb|AAU28929.1| methionyl tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 693

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL +EG+KMSKS G FI     L 
Sbjct: 312 HFVGKDIVYFHALFWPAML-AASGFRTPTAVYTH-GFLTVEGQKMSKSRGTFIEARAYLA 369

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 370 -------HLHPEYLRYYF 380


>gi|45658951|ref|YP_003037.1| methionyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|68565987|sp|Q72MR4|SYM_LEPIC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|45602196|gb|AAS71674.1| methionyl-tRNA synthetase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 715

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+++ H     A    +D     + + +H GF+ + G KMSKS G FI     +
Sbjct: 317 VHFIGKDILYFHTLFWPAMLEGSDYRAP-SKVHVH-GFIGVNGEKMSKSRGTFIKAETFV 374

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
                  +      +R  +  
Sbjct: 375 -------KYLDPEHLRFYLAS 388


>gi|20094195|ref|NP_614042.1| arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
 gi|23822192|sp|Q8TXB6|SYR_METKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|19887217|gb|AAM01972.1| Arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
          Length = 592

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 6/69 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA----RQEHPSI 90
                HIG+ R  ++ D+L R + +      V Y  N  D+  +I   A    ++  P +
Sbjct: 141 PNGPLHIGHGRNAVIGDILARCMVFTNYGVEVQYYVN--DMGKQIAMLAWKYIKEGRPEV 198

Query: 91  PINDAISII 99
           P  +     
Sbjct: 199 PEGEKPDEF 207


>gi|15895665|ref|NP_349014.1| valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|81529863|sp|Q97GG8|SYV_CLOAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15025413|gb|AAK80354.1|AE007740_1 Valyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325509815|gb|ADZ21451.1| valyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 881

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 19/144 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                 +++IH    + EGRKMSKS GN +   ++++T       + A  +R  ++  + 
Sbjct: 507 GEVPFKHVYIHGLVRDAEGRKMSKSLGNGVDPLDVIDT-------FGADALRFMLITGN- 558

Query: 317 REP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSA-----IQA 367
             P   I +  +++  A    +K W  +      +D  ++   Y DL   S      +  
Sbjct: 559 -APGNDIRYKTEKVEAARNFANKIWNASRFVLMNLDKEIMDK-YKDLEEYSLADRWILSR 616

Query: 368 LHKLARESTKNHDLLPIFNASAHI 391
            + L RE T N +   +  AS  +
Sbjct: 617 CNSLVREVTDNIEKFELGIASQKV 640


>gi|296108530|ref|YP_003620231.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
 gi|295650432|gb|ADG26279.1| methionyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
          Length = 664

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL +EG+KMSKS G FI     L 
Sbjct: 283 HFVGKDIVYFHALFWPAML-AASGFRTPTAVYTH-GFLTVEGQKMSKSRGTFIEARAYLA 340

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 341 -------HLHPEYLRYYF 351


>gi|262368863|ref|ZP_06062192.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
 gi|262316541|gb|EEY97579.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
          Length = 685

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    +      NGFL + G+KMSKS G FI     LE
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPSGL--FVNGFLTVNGQKMSKSRGTFIKAETYLE 346

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                        +R     
Sbjct: 347 -------HLNPEYLRYYFAS 359


>gi|167522938|ref|XP_001745806.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163775607|gb|EDQ89230.1| predicted protein [Monosiga brevicollis MX1]
          Length = 1051

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 38/104 (36%), Gaps = 6/104 (5%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLM 313
           D       +  H   L+ +G+KMSKS GN +  + ++   K   +   + A  +RL    
Sbjct: 605 DGQAPYRQLLTHGFVLDEQGQKMSKSLGNGVDPSVVINGGKNLKQEPAYGADTLRLWAAS 664

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLS 353
             Y   +      L      L K          + G  +PA+ S
Sbjct: 665 VDYTNDVSIGPNTLRITHENLRKIRNALRFMHGNLGAAEPALAS 708


>gi|148361194|ref|YP_001252401.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby]
 gi|187647732|sp|A5II55|SYM_LEGPC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148282967|gb|ABQ57055.1| methionyl tRNA synthetase [Legionella pneumophila str. Corby]
          Length = 670

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL +EG+KMSKS G FI     L 
Sbjct: 289 HFVGKDIVYFHALFWPAML-AASGFRTPTAVYTH-GFLTVEGQKMSKSRGTFIEARAYLA 346

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 347 -------HLHPEYLRYYF 357


>gi|116515200|ref|YP_802829.1| LeuS [Buchnera aphidicola str. Cc (Cinara cedri)]
 gi|122285404|sp|Q057G3|SYL_BUCCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116257054|gb|ABJ90736.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara cedri)]
          Length = 847

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 33/105 (31%), Gaps = 10/105 (9%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +K   F  ID    + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 21  KKKIFFTKIDKEKKKFYCLPMLPYPSGKLHMGHVRNYTISDVISRFHRMLG--------K 72

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  +I  N +    T KN +   K    L 
Sbjct: 73  NVLQPIGWDSFGLPAEETAIKNNISPKKWTFKNIKTMKKQLQSLG 117


>gi|54298874|ref|YP_125243.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris]
 gi|68565968|sp|Q5X105|SYM_LEGPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53752659|emb|CAH14094.1| methionyl-tRNA synthetase [Legionella pneumophila str. Paris]
          Length = 670

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL +EG+KMSKS G FI     L 
Sbjct: 289 HFVGKDIVYFHALFWPAML-AASGFRTPTAVYTH-GFLTVEGQKMSKSRGTFIEARAYLA 346

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 347 -------HLHPEYLRYYF 357


>gi|313669111|ref|YP_004049395.1| leucyl-tRNA synthetase [Neisseria lactamica ST-640]
 gi|313006573|emb|CBN88037.1| putative leucyl-tRNA synthetase [Neisseria lactamica 020-06]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGKAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772



 Score = 37.9 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKHNVAPAAWTYDNIEYMKTQLKSLGF--AIDWE 122

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 123 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159


>gi|251790538|ref|YP_003005259.1| leucyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539159|gb|ACT07780.1| leucyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 860

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F    +P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEEPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T  N +        L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIEYMKNQLKLLG 116


>gi|70726264|ref|YP_253178.1| valyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
 gi|90108438|sp|Q4L703|SYV_STAHJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|68446988|dbj|BAE04572.1| valine-tRNA ligase [Staphylococcus haemolyticus JCSC1435]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   +++E  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVIE-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|329767449|ref|ZP_08258974.1| valyl-tRNA synthetase [Gemella haemolysans M341]
 gi|328836138|gb|EGF85829.1| valyl-tRNA synthetase [Gemella haemolysans M341]
          Length = 880

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           +  IH    + +GRKMSKS GN +   E++E  
Sbjct: 482 TGYDIIFFWVARMVFQGLEFTGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIE-- 539

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++  +   ++K    S 
Sbjct: 540 -----QYGADSLRYFLATNS--TPGQDLRYSTEKIEASWNYINKIWNASR 582


>gi|241889659|ref|ZP_04776957.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
 gi|241863281|gb|EER67665.1| valyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
          Length = 880

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 43/110 (39%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q           +  IH    + +GRKMSKS GN +   E++E  
Sbjct: 482 TGYDIIFFWVARMVFQGLEFTGTRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIE-- 539

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++  +   ++K    S 
Sbjct: 540 -----QYGADSLRYFLATNS--TPGQDLRYSTEKIEASWNYINKIWNASR 582


>gi|157826927|ref|YP_001495991.1| valyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
 gi|166225529|sp|A8GVS7|SYV_RICB8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157802231|gb|ABV78954.1| valyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
          Length = 812

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 22/137 (16%)

Query: 215 WHIEC-SAMSSHYLGKVFDIHGGGLDLIFPHHE-------NEIAQSCCADRIEKTANIWI 266
           W I    A++    GK+F      +DL    HE         I ++          NI +
Sbjct: 471 WGISDEFAVNKDRHGKLFP-----MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNI-M 524

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
            +G+ L  +  KMSKS GN +   +LLE        + + VIR     +       ++  
Sbjct: 525 VSGWCLAEDRSKMSKSKGNVLVPEKLLE-------QYGSDVIRYWSANSKLGADTAYSED 577

Query: 326 RLTEAEILLSKWPQTST 342
            +   + L++K    + 
Sbjct: 578 VMKNGKRLVNKLWNAAK 594


>gi|24216617|ref|NP_714098.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
 gi|68566008|sp|Q8EZD6|SYM_LEPIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|24197948|gb|AAN51116.1| methionyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 715

 Score = 38.3 bits (88), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 9/81 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+++ H     A    +D     + + +H GF+ + G KMSKS G FI     +
Sbjct: 317 VHFIGKDILYFHTLFWPAMLEGSDYRAP-SKVHVH-GFIGVNGEKMSKSRGTFIKAETFV 374

Query: 293 ETKKFGGRSWPAPVIRLAMLM 313
                  +      +R  +  
Sbjct: 375 -------KYLDPEHLRFYLAS 388


>gi|283470931|emb|CAQ50142.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ST398]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 12/113 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF      I Q           ++ +H      +GRKMSKS GN +   +++
Sbjct: 476 VLVTGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVI 535

Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +        + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 536 D-------EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|258513470|ref|YP_003189692.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
 gi|257777175|gb|ACV61069.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
          Length = 533

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 39/140 (27%), Gaps = 22/140 (15%)

Query: 33  PTVY---------DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           PT Y         D  HIG+A   +  D   R  R    +     V  +T  D+      
Sbjct: 4   PTFYISTPIYYPSDKLHIGHAYTTVAADSFARYKRMKGYD-----VWFLTGSDEH---GQ 55

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIIL 141
           + E  +     +      +    F     +L         R T   H   +  + Q +  
Sbjct: 56  KIERTAKEKGQSPLEYVDQIVAGFKSLWKKLDVSYDDF-IRTTQERHKKVVQDIFQKLYD 114

Query: 142 HGHAYEA--NNEIIFDTSSI 159
            G  Y+A           + 
Sbjct: 115 QGDIYKAQYEGHYCTPCETF 134


>gi|168217202|ref|ZP_02642827.1| leucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
 gi|182380741|gb|EDT78220.1| leucyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
          Length = 816

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND----- 358
             +      + +  +              +K  +D A           + ++ +D     
Sbjct: 618 DGIKSVNRFVERIERIIDTAREAISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQ 677

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A     I AL K  +E   N D L 
Sbjct: 678 FNTAIARMMEFINALSKYTQEKEMNLDFLK 707


>gi|149641571|ref|XP_001511676.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
          Length = 1272

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 2/79 (2%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRLAMLMTHYREPIDFT 323
           +H   L  +G KMSKS GN +  + ++   +   +   + A V+R  +  ++    +   
Sbjct: 656 VHGFTLGEKGEKMSKSLGNVVDPDVIINGGQDHSKDPPYGADVLRWWVADSNVFADVTIG 715

Query: 324 VQRLTEAEILLSKWPQTST 342
              L  A   ++K   T  
Sbjct: 716 SASLAAAREDVNKLRNTVR 734


>gi|91205324|ref|YP_537679.1| valyl-tRNA synthetase [Rickettsia bellii RML369-C]
 gi|123388130|sp|Q1RJ74|SYV_RICBR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|91068868|gb|ABE04590.1| Valyl-tRNA synthetase [Rickettsia bellii RML369-C]
          Length = 812

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 22/137 (16%)

Query: 215 WHIEC-SAMSSHYLGKVFDIHGGGLDLIFPHHE-------NEIAQSCCADRIEKTANIWI 266
           W I    A++    GK+F      +DL    HE         I ++          NI +
Sbjct: 471 WGISDEFAVNKDRHGKLFP-----MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNI-M 524

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
            +G+ L  +  KMSKS GN +   +LLE        + + VIR     +       ++  
Sbjct: 525 VSGWCLAEDRSKMSKSKGNVLVPEKLLE-------QYGSDVIRYWSANSKLGADTAYSED 577

Query: 326 RLTEAEILLSKWPQTST 342
            +   + L++K    + 
Sbjct: 578 VMKNGKRLVNKLWNAAK 594


>gi|89895934|ref|YP_519421.1| valyl-tRNA synthetase [Desulfitobacterium hafniense Y51]
 gi|89335382|dbj|BAE84977.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 881

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               + IH   L+ +GRKMSKS GN +   E+++        + A  +R  ++  +   P
Sbjct: 510 PFQKVMIHGLVLDAQGRKMSKSLGNGVDPLEVID-------QYGADTLRFMLITGN--TP 560

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +RL       +K    S 
Sbjct: 561 GNDLRFHPERLEATRNFANKIWNASR 586


>gi|295395007|ref|ZP_06805219.1| valine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294972166|gb|EFG48029.1| valine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 881

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G D+I     + + ++   +      N  +    L+ + +KMSKS GN +  +
Sbjct: 553 PFDLRPQGHDIIRTWLFSTVVRANSINGSIPWTNTALSGWILDPDRKKMSKSKGNVVVPS 612

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT 314
           +++   K G   +    +R      
Sbjct: 613 DIIAETKPG---FGPDAVRYWAASA 634


>gi|256851598|ref|ZP_05556987.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260661023|ref|ZP_05861938.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|282932387|ref|ZP_06337818.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
 gi|256616660|gb|EEU21848.1| leucyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
 gi|260548745|gb|EEX24720.1| leucyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
 gi|281303501|gb|EFA95672.1| leucine--tRNA ligase [Lactobacillus jensenii 208-1]
          Length = 804

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 81/264 (30%), Gaps = 67/264 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H                    E    ++ + G +  +  KMSKS G
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLY-NQGLILKDHDKMSKSKG 579

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A  +R   M M      ID+        +  L +  +   
Sbjct: 580 NVVNPDEVIE-------EYGADSLRTYEMFMGPLDASIDWDDNGPASTKKFLDRVWRLFV 632

Query: 343 SKGIIDPAVLSAL--YND----------------------LNTVSAIQALHKLARESTKN 378
           +   +DP V   +   ND                       NT  AI  +     E+ K 
Sbjct: 633 NDLDLDPIVSDKVVEENDGSLDKIYNQTVKKVTEDFESLHFNT--AISQMMVFVNEAQKA 690

Query: 379 HD-----------LLP-----IFNASAHILG-------IEVCKEHLNKNISIAIEKLVQE 415
                        LL      +      +LG        E  K    K +   +E +VQ 
Sbjct: 691 KTIPMEYAEGFVKLLAPVAPHMMEEIWQVLGHNESISYAEWPKFDPEKLVESTVEIMVQV 750

Query: 416 RLILLKMKKFSSA-DYIRKQLESK 438
              L     FS+A D  + +LE  
Sbjct: 751 NGKLRGK--FSAAKDAAKDELEKA 772


>gi|167849132|ref|ZP_02474640.1| putative leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
          Length = 346

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRL 327
           G +  + RKMSKS GN +++  ++E        + A  +RLA++        ++++   +
Sbjct: 137 GMVKQDDRKMSKSAGNAVSLASIIER-------YGADALRLAIIGAAAPENDVNWSDDLV 189

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALY 356
                 +++           +  + +A  
Sbjct: 190 RRQRAFVARLWAFVHRVAETEAGIAAAHD 218


>gi|34556632|ref|NP_906447.1| arginyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
 gi|81833211|sp|Q7MAK6|SYR_WOLSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|34482346|emb|CAE09347.1| ARGINYL-TRNA SYNTHETASE [Wolinella succinogenes]
          Length = 528

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           PT     HIG+AR  ++ D L R+ R+        Y  N
Sbjct: 114 PT--GPLHIGHARGAVLGDALSRIGRHLGYALETEYYVN 150


>gi|295100369|emb|CBK97914.1| leucyl-tRNA synthetase, eubacterial and mitochondrial family
           [Faecalibacterium prausnitzii L2-6]
          Length = 849

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 38/122 (31%), Gaps = 15/122 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R     DV+ R  +       V Y              A + H         +I+
Sbjct: 48  HVGHPRSYTALDVVSR--KRRQNGYNVLYPMGWDAFGLPTENFAMKNHIH------PAIV 99

Query: 100 TSKNTQQFVKDTTRLACLAP-THQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIF 154
           T KN   F +    L        +   T+  P+     Q     +   G AY+    + +
Sbjct: 100 TKKNVDHFREQLKALGFSFDWDREINTTD--PEYYKWTQWIFLQLYKKGLAYKKEMNVNW 157

Query: 155 DT 156
            T
Sbjct: 158 CT 159


>gi|294010028|ref|YP_003543488.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
 gi|292673358|dbj|BAI94876.1| leucyl-tRNA synthetase [Sphingobium japonicum UT26S]
          Length = 838

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 48/143 (33%), Gaps = 25/143 (17%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +  ++++         + A  +R  ML      P    + +T   +  + 
Sbjct: 613 EKMSKSKKNVVDPDDIIA-------QYGADAVRWFMLS---DSPPERDLPWTEAGIEGSW 662

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
             +++  +               L          + LH+      K+ + L    A A I
Sbjct: 663 RFINRLWRLFGEADKGAEGQDKTLD---------RKLHQTIDGVAKDIEALSFNKAVAKI 713

Query: 392 --LGIEVCKEHLNKNISIAIEKL 412
             L   V K   + + S AI  L
Sbjct: 714 YELTNAVEKARPSASRSAAIRAL 736


>gi|225849502|ref|YP_002729667.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643602|gb|ACN98652.1| leucyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 607

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 31/114 (27%), Gaps = 13/114 (11%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+ R   + DV+ R  R     K   +              A      I      + 
Sbjct: 47  IHMGHVRNYAIGDVINRYYRMTG--KNTLHPMGWDAFGMPAENAA------IKSGIHPAK 98

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEA 148
            T +N         RL       +  AT + P      Q     +   G AY  
Sbjct: 99  WTYENIDYMKSQLKRLGFSYDWDREIATCN-PDYYKWNQWLFLKMFEKGIAYRK 151


>gi|294659967|ref|XP_462418.2| DEHA2G20130p [Debaryomyces hansenii CBS767]
 gi|199434368|emb|CAG90928.2| DEHA2G20130p [Debaryomyces hansenii]
          Length = 589

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 43/130 (33%), Gaps = 10/130 (7%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   M++ D   R        K   ++    +   KI   A +      +  
Sbjct: 34  VNARPHLGHLYSMLLCDTRNRW-EKLDPNKSSFFLTGTDEHGLKIQTAAEK------LGM 86

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +T + +  F     ++   A     R T  +H+  + Y    +   G  Y+ ++  
Sbjct: 87  TPKDLTDQVSTNFKNLGQKVNI-AYDRFIRTTDEDHVKTVQYFWSVMEEKGFLYQGSHSG 145

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 146 WYAVSDETFY 155


>gi|168213858|ref|ZP_02639483.1| leucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
 gi|170714638|gb|EDT26820.1| leucyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
          Length = 816

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND----- 358
             +      + +  +              +K  +D A           + ++ +D     
Sbjct: 618 DGIKSVNRFVERIERIIDTAREAISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQ 677

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A     I AL K  +E   N D L 
Sbjct: 678 FNTAIARMMEFINALSKYTQEKEMNLDFLK 707


>gi|121535702|ref|ZP_01667506.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
 gi|121305733|gb|EAX46671.1| ATPase AAA-2 domain protein [Thermosinus carboxydivorans Nor1]
          Length = 814

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 58/147 (39%), Gaps = 18/147 (12%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
           +PI      + EA  +L               A   A   D   V+A++  H+   +   
Sbjct: 340 QPIMVGEPSVEEAIEILRGLRDRY-------EAFHKAQITDEAIVAAVKLSHRYITDRFL 392

Query: 378 NHDLLPIFNASAHILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSA-------D 429
               + + + +A  + +       + K++   +EKL+ E+   +  ++F  A       D
Sbjct: 393 PDKAIDLMDEAASRVRLRAVSLPPDVKDLEKKLEKLLAEKQAAITAQEFEEAARIKREED 452

Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTR 456
            IR++LE +    +D+K   +GQ +  
Sbjct: 453 QIRQELEKRQ---KDWKQRGSGQVIVT 476


>gi|18309652|ref|NP_561586.1| leucyl-tRNA synthetase [Clostridium perfringens str. 13]
 gi|32171575|sp|Q8XML8|SYL_CLOPE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|18144329|dbj|BAB80376.1| leucine-tRNA ligase [Clostridium perfringens str. 13]
          Length = 816

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND----- 358
             +      + +  +              +K  +D A           + ++ +D     
Sbjct: 618 DGIKSVNRFVERIERIIDTAREAISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQ 677

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A     I AL K  +E   N D L 
Sbjct: 678 FNTAIARMMEFINALSKYTQEKEMNLDFLK 707


>gi|317165158|gb|ADV08699.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 719

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 23/188 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 333 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 390

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 391 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 443

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARES---TKNHDLLPIFNASAHILGI-EVCKEHLNK 403
                  L +    VS    L KLA ES    + ++      A   I+ + ++  E+++ 
Sbjct: 444 AKRFEGRLKD----VSGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDA 499

Query: 404 NISIAIEK 411
           N    + K
Sbjct: 500 NKPWELAK 507


>gi|301054134|ref|YP_003792345.1| lysine-tRNA ligase, N-terminal domain-containing protein [Bacillus
           anthracis CI]
 gi|300376303|gb|ADK05207.1| lysine-tRNA ligase, N-terminal domain protein [Bacillus cereus
           biovar anthracis str. CI]
          Length = 148

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 36/112 (32%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCASGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNIT-DIDDKIIERARQEHPSIPI-NDAISIITSKNTQQFVKDTTRLACL 117
             R +  ++D   ++     +  IP      +       ++F K        
Sbjct: 69  RFRKVPKNVDPSFVKYIGMPYCDIPDPYKCHNSYAEHFEKEFEKSLQAFGIE 120


>gi|238853976|ref|ZP_04644333.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
 gi|238833421|gb|EEQ25701.1| isoleucine-tRNA ligase [Lactobacillus gasseri 202-4]
          Length = 933

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 7/114 (6%)

Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           LG   D++  G D       + +  S           +      L+ +G KMSKS GN I
Sbjct: 550 LGFPADLYLEGSDQYRGWFNSSLITSVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVI 609

Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + N+++       +   A +IRL +        +  +   L ++     K   T
Sbjct: 610 SPNDVI-------KQMGAEIIRLWVAGADTTSDVVVSQDILRQSAESYRKIRNT 656


>gi|54020648|ref|YP_116175.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
 gi|53987821|gb|AAV28022.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
          Length = 755

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 15/90 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLN-LEGRKMSKSN 282
             D++ GG +    H                    E    I IH G L   +G+KMSKS 
Sbjct: 475 PVDLYIGGQEHAVGHLIYSRFWHKVLFDAGIVPNSEPFQKI-IHQGMLLGSDGQKMSKSK 533

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML 312
           GN I   E+++        + A  IR+ ++
Sbjct: 534 GNTINPTEMID-------KFGADTIRIFLM 556


>gi|218562403|ref|YP_002344182.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|12585353|sp|Q9PPE4|SYV_CAMJE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|112360109|emb|CAL34903.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
           11168]
 gi|315928297|gb|EFV07613.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni DFVF1099]
          Length = 870

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS          +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K         + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNAKNYLLLNESKFED 597


>gi|99079886|ref|YP_612040.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
 gi|123379171|sp|Q1GKN8|SYL_SILST RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|99036166|gb|ABF62778.1| leucyl-tRNA synthetase [Ruegeria sp. TM1040]
          Length = 857

 Score = 38.3 bits (88), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 32/119 (26%), Gaps = 11/119 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DV+ R          V +              A                
Sbjct: 48  HMGHVRNYTMGDVIARY--KLSTGHNVLHPMGFDAFGMPAENAAMASGGH------PKDW 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
           T  N    V+    L       +  AT    +  Q   L  + +  G  Y  N  + +D
Sbjct: 100 TYSNIDTMVEQMKPLGLSLDWSRMFATCDPEYYGQQQALFLDFLEKGLVYRKNAVVNWD 158


>gi|296532262|ref|ZP_06895004.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
 gi|296267413|gb|EFH13296.1| isoleucyl-tRNA synthetase [Roseomonas cervicalis ATCC 49957]
          Length = 956

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A+       I  H   L+  GRKMSKS GN     E+        + + A ++RL +
Sbjct: 619 SVGANGHAPFKAILTHGFVLDETGRKMSKSLGNVTAPQEV-------TKQYGADILRLWV 671

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           + +   + +      L +   L  +   T
Sbjct: 672 MNSDTADDLRIGKNILAQQAELYRRIRNT 700


>gi|268595679|ref|ZP_06129846.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268549068|gb|EEZ44486.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
          Length = 700

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 23/188 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 314 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 371

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 372 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 424

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARES---TKNHDLLPIFNASAHILGI-EVCKEHLNK 403
                  L +    VS    L KLA ES    + ++      A   I+ + ++  E+++ 
Sbjct: 425 AKRFEGRLKD----VSGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDA 480

Query: 404 NISIAIEK 411
           N    + K
Sbjct: 481 NKPWELAK 488


>gi|302880066|ref|YP_003848630.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582855|gb|ADL56866.1| leucyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 893

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 33/120 (27%), Gaps = 13/120 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + DVL R  R       V                A+        N   +  
Sbjct: 49  HMGHVRNYTIGDVLSRYHRMKGFN--VMQPMGWDAFGLPAENAAQAH------NVPPAAW 100

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANNEIIFD 155
           T  N     +    L  L        T   P+     Q     +   G  Y+  + + +D
Sbjct: 101 TYDNINYMRRQLQSLG-LGIDWSREVTTCTPEYYRWEQWLFTRLFEKGIIYKKTSSVNWD 159


>gi|240120254|ref|ZP_04733216.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 700

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 23/188 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 314 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 371

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 372 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 424

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARES---TKNHDLLPIFNASAHILGI-EVCKEHLNK 403
                  L +    VS    L KLA ES    + ++      A   I+ + ++  E+++ 
Sbjct: 425 AKRFEGRLKD----VSGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDA 480

Query: 404 NISIAIEK 411
           N    + K
Sbjct: 481 NKPWELAK 488


>gi|297206419|ref|ZP_06923814.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
 gi|297149545|gb|EFH29843.1| leucine--tRNA ligase [Lactobacillus jensenii JV-V16]
          Length = 804

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 50/264 (18%), Positives = 81/264 (30%), Gaps = 67/264 (25%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H                    E    ++ + G +  +  KMSKS G
Sbjct: 521 PVDLYIGGAEHAVRHLLYARFWHKVLYDLGVVPTKEPFQRLY-NQGLILKDHDKMSKSKG 579

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  +E++E        + A  +R   M M      ID+        +  L +  +   
Sbjct: 580 NVVNPDEVIE-------EYGADSLRTYEMFMGPLDASIDWDDNGPASTKKFLDRVWRLFV 632

Query: 343 SKGIIDPAVLSAL--YND----------------------LNTVSAIQALHKLARESTKN 378
           +   +DP V   +   ND                       NT  AI  +     E+ K 
Sbjct: 633 NDLDLDPIVSDKVVEENDGSLDKIYNQTVKKVTEDFESLHFNT--AISQMMVFVNEAQKA 690

Query: 379 HD-----------LLP-----IFNASAHILG-------IEVCKEHLNKNISIAIEKLVQE 415
                        LL      +      +LG        E  K    K +   +E +VQ 
Sbjct: 691 KTIPMEYAEGFVKLLAPVAPHMMEEIWQVLGHNESISYAEWPKFDPEKLVESTVEIMVQV 750

Query: 416 RLILLKMKKFSSA-DYIRKQLESK 438
              L     FS+A D  + +LE  
Sbjct: 751 NGKLRGK--FSAAKDAAKDELEKA 772


>gi|168204680|ref|ZP_02630685.1| leucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|182624131|ref|ZP_02951918.1| leucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
 gi|170663753|gb|EDT16436.1| leucyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
 gi|177910747|gb|EDT73107.1| leucyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
          Length = 816

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND----- 358
             +      + +  +              +K  +D A           + ++ +D     
Sbjct: 618 DGIKSVNRFVERIERIIDTAREAISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQ 677

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A     I AL K  +E   N D L 
Sbjct: 678 FNTAIARMMEFINALSKYTQEKEMNLDFLK 707


>gi|154272007|ref|XP_001536856.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
 gi|150408843|gb|EDN04299.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
          Length = 1506

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 18/92 (19%)

Query: 267  HNGFLNLEGRKMSKSNGNFITINELL---------------ETKKFGGRSWPA---PVIR 308
            H   L+ + RKMSKS GN I+ +++L               E KK     + A     +R
Sbjct: 1114 HGFTLDKDSRKMSKSIGNVISPDQILDGTLLPPLKLKRMKGEEKKPTAPVFDALGTDALR 1173

Query: 309  LAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            L +  + Y + I  +   L      L K+  T
Sbjct: 1174 LWVASSDYTKDIVISQPVLKTVHTNLHKYRVT 1205


>gi|110802688|ref|YP_697972.1| leucyl-tRNA synthetase [Clostridium perfringens SM101]
 gi|123146264|sp|Q0SV78|SYL_CLOPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|110683189|gb|ABG86559.1| leucine--tRNA ligase [Clostridium perfringens SM101]
          Length = 816

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND----- 358
             +      + +  +              +K  +D A           + ++ +D     
Sbjct: 618 DGIKSVNRFVERIERIIDTAREAISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQ 677

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A     I AL K  +E   N D L 
Sbjct: 678 FNTAIARMMEFINALSKYTQEKEMNLDFLK 707


>gi|42526560|ref|NP_971658.1| hypothetical protein TDE1050 [Treponema denticola ATCC 35405]
 gi|41816753|gb|AAS11539.1| hypothetical protein TDE_1050 [Treponema denticola ATCC 35405]
 gi|325473499|gb|EGC76694.1| hypothetical protein HMPREF9353_02489 [Treponema denticola F0402]
          Length = 227

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 41/97 (42%), Gaps = 7/97 (7%)

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
           R  ++F    +   +I L        S+G   P+V+  + +D N   A+    K  +   
Sbjct: 100 RIVLNFNQDTVRTTQI-LKTIRAL--SEGGSKPSVV--MIDDFNFAKALPEAMKAMKAFA 154

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           K  D+   + A+A +   E+  E L K I   I+ L+
Sbjct: 155 KEMDVAVWYTAAADVASFEI-DESLKKYIDD-IDVLL 189


>gi|146279165|ref|YP_001169324.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
 gi|166231637|sp|A4WXA5|SYL_RHOS5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|145557406|gb|ABP72019.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
          Length = 873

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 40/139 (28%), Gaps = 13/139 (9%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DPS  + YV    P      H+G+ R   + DV+ R  +       V +           
Sbjct: 28  DPSRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVAR--QKAAAGYSVLHPMGWDAFGMPA 85

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
              A +              T  N          L       +  AT    +  Q   + 
Sbjct: 86  ENAAMERGGH------PKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMF 139

Query: 137 QNIILHGHAYEANNEIIFD 155
            +++  G  Y  N  + +D
Sbjct: 140 IDMLEAGLIYRKNAVVNWD 158


>gi|294496117|ref|YP_003542610.1| glutamyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292667116|gb|ADE36965.1| glutamyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 570

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 42/130 (32%), Gaps = 29/130 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P     A +G+AR M+   +    ++ Y G+  + +     D  D   +R   E      
Sbjct: 110 PNPNGPATLGSARGMV---INSEYVKMYGGDFIIRF-----DDTDPQTKRPLLEAYEW-- 159

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
                         ++ D   L    P    +A++ I       + +I  GHAY      
Sbjct: 160 --------------YLDDCKWLGIE-PDRVVKASDRITLYYEYARKLIEMGHAYV----C 200

Query: 153 IFDTSSIPNY 162
             + +    Y
Sbjct: 201 FCEGADFKKY 210


>gi|255659102|ref|ZP_05404511.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
 gi|260848546|gb|EEX68553.1| methionine--tRNA ligase [Mitsuokella multacida DSM 20544]
          Length = 650

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 16/67 (23%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDF 322
           +G+L ++G KMSKS GN +  N L++        + A  IR  +L    R     +  +F
Sbjct: 289 HGWLIVDGDKMSKSKGNVVDPNGLID-------EFGADAIRYFLL----REINLGQDGNF 337

Query: 323 TVQRLTE 329
           +   L +
Sbjct: 338 SRDALIQ 344


>gi|169344415|ref|ZP_02865384.1| leucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
 gi|169297335|gb|EDS79444.1| leucyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
          Length = 816

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 40/150 (26%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEYGADVFRMYLMFGFAYTEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQ-----------TSTSKGIIDPAV----------LSALYND----- 358
             +      + +  +              +K  +D A           + ++ +D     
Sbjct: 618 DGIKSVNRFVERIERIIDTAREAISKGENNKTTMDKAEKELNYWRHNTIKSVTDDTDKLQ 677

Query: 359 LNTVSA-----IQALHKLARESTKNHDLLP 383
            NT  A     I AL K  +E   N D L 
Sbjct: 678 FNTAIARMMEFINALSKYTQEKEMNLDFLK 707


>gi|254825910|ref|ZP_05230911.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|254853705|ref|ZP_05243053.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|255519716|ref|ZP_05386953.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
 gi|300764921|ref|ZP_07074910.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
 gi|258607084|gb|EEW19692.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
 gi|293595148|gb|EFG02909.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
 gi|300514408|gb|EFK41466.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
          Length = 664

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 128

Query: 154 FDTS 157
           +  S
Sbjct: 129 YSVS 132


>gi|17511007|ref|NP_492711.1| glutamyl(E)/glutaminyl(Q) tRNA Synthetase family member (ers-2)
           [Caenorhabditis elegans]
 gi|3925372|emb|CAB00060.1| C. elegans protein ZC434.5, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 1149

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 42/167 (25%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            + HIG+A+  +       L +YY        +    D +    E A  EH         
Sbjct: 204 GYLHIGHAKAAL-------LNQYYQQAFEGQLIMRFDDTN-PAKENAHFEHVI------- 248

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
                       +D + L  + P     +++H   ++ + + ++  G A+  + +     
Sbjct: 249 -----------KEDLSMLNIV-PDRWTHSSDHFEMLLTMCEKLLKEGKAFVDDTD----- 291

Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
                  + + R   EQ+  +R      +KN     LW+      P 
Sbjct: 292 -------TETMRNEREQRQDSRNRSNTPEKNLQ---LWEEMKKGSPK 328


>gi|86150255|ref|ZP_01068482.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88597514|ref|ZP_01100748.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|85839371|gb|EAQ56633.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
 gi|88190106|gb|EAQ94081.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
 gi|284926021|gb|ADC28373.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
 gi|315929651|gb|EFV08831.1| valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
          Length = 870

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS          +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K         + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNAKNYLLLNESKFED 597


>gi|319780907|ref|YP_004140383.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166795|gb|ADV10333.1| leucyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 874

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 52/147 (35%), Gaps = 41/147 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N ++  ++ +        + A   R  ML      P    +++T      A 
Sbjct: 629 EKMSKSKKNTVSPEDITD-------GYGADTARWFMLS---DSPPERDVEWTDDGAAGAH 678

Query: 332 ILLSK-WPQTSTSKGII-----------DPAVLS--------ALYND-----LNTVSAIQ 366
             + + W   ST+   +           + AV+S        A+  D      N   AI 
Sbjct: 679 RFIQRIWRLVSTAAETLAGIKPVAASSGEAAVVSKAAHKILKAVGEDIEKLAFN--RAIA 736

Query: 367 ALHKLARESTKNHDLLPIFNASAHILG 393
            +++LA   T   + +    A A + G
Sbjct: 737 RIYELANALTTPLNEVAEGKADAALKG 763


>gi|271499707|ref|YP_003332732.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586]
 gi|270343262|gb|ACZ76027.1| leucyl-tRNA synthetase [Dickeya dadantii Ech586]
          Length = 860

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F    +P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEEPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T  N +        L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIEYMKNQLKLLG 116


>gi|254933016|ref|ZP_05266375.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|293584575|gb|EFF96607.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
 gi|328469714|gb|EGF40636.1| methionyl-tRNA synthetase [Listeria monocytogenes 220]
 gi|332310585|gb|EGJ23680.1| Methionyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
          Length = 664

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 128

Query: 154 FDTS 157
           +  S
Sbjct: 129 YSVS 132


>gi|71735657|ref|YP_273635.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|123747684|sp|Q48LT7|SYM_PSE14 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71556210|gb|AAZ35421.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
           [Pseudomonas syringae pv. phaseolicola 1448A]
          Length = 682

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 43/175 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L+         P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLD-------HLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                   K  +      +     +  + +DL        + K+   +++    +   NA
Sbjct: 361 --------KLGRGVDDLDLNFEDFVQKVNSDL--------IGKVVNIASRCAGFIHKGNA 404

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
              ++G       L      A   I    + R     M++  + AD     +  K
Sbjct: 405 --GVMGEANAAPELTDAFLAAAPSIADAYEARDFARAMRETMALADRANAYIAEK 457


>gi|161723239|ref|YP_096876.2| methionyl-tRNA synthetase [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|68565969|sp|Q5ZRJ9|SYM_LEGPH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
          Length = 670

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL +EG+KMSKS G FI     L 
Sbjct: 289 HFVGKDIVYFHALFWPAML-AASGFRTPTAVYTH-GFLTVEGQKMSKSRGTFIEARAYLA 346

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 347 -------HLHPEYLRYYF 357


>gi|57237620|ref|YP_178868.1| valyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|81819531|sp|Q5HV17|SYV_CAMJR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|57166424|gb|AAW35203.1| valyl-tRNA synthetase [Campylobacter jejuni RM1221]
 gi|315058229|gb|ADT72558.1| Valyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
          Length = 870

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 41/105 (39%), Gaps = 10/105 (9%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           QS          +I++H    + +GRKMSKS GN I  NE +       + + A ++R  
Sbjct: 501 QSTNVLHQLPFKDIYLHALVKDEQGRKMSKSLGNVIDPNESI-------KEYSADILRFT 553

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
            A+L    R  I  +  +L +     +K         + +     
Sbjct: 554 LALLAIQGR-DIKLSNDKLLQVRNFTNKIYNAKNYLLLNESKFED 597


>gi|54295707|ref|YP_128122.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|68565967|sp|Q5WST1|SYM_LEGPL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|53755539|emb|CAH17038.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
          Length = 670

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL +EG+KMSKS G FI     L 
Sbjct: 289 HFVGKDIVYFHALFWPAML-AASGFRTPTAVYTH-GFLTVEGQKMSKSRGTFIEARAYLA 346

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 347 -------HLHPEYLRYYF 357


>gi|307611755|emb|CBX01463.1| methionyl-tRNA synthetase [Legionella pneumophila 130b]
          Length = 664

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL +EG+KMSKS G FI     L 
Sbjct: 283 HFVGKDIVYFHALFWPAML-AASGFRTPTAVYTH-GFLTVEGQKMSKSRGTFIEARAYLA 340

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 341 -------HLHPEYLRYYF 351


>gi|262276791|ref|ZP_06054584.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
 gi|262223894|gb|EEY74353.1| isoleucine-tRNA ligase [alpha proteobacterium HIMB114]
          Length = 918

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 14/109 (12%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            S          +I  H   ++ +G+KMSKS GN +   E+++            ++RL 
Sbjct: 571 HSVGTRGNAPYKSILTHGFVVDGKGQKMSKSLGNVVAPEEIIKKNGV-------DILRLW 623

Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL 359
           ++ + Y E +      +++      K   T          +L  +++D 
Sbjct: 624 VVASDYSEDLRIDQSIISQHSESYRKIRNTLR-------FLLGNIFDDF 665


>gi|240013183|ref|ZP_04720096.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
          Length = 684

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 70/196 (35%), Gaps = 25/196 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 298 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 355

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 356 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 408

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLPIFNASAHILGIEVCKEHL 401
                  L +    VS    L KLA ES       +N +          +  I       
Sbjct: 409 AKRFEGRLKD----VSGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDA 464

Query: 402 NKNISIAIEKLVQERL 417
           NK   +A ++   ERL
Sbjct: 465 NKPWELAKQEGQDERL 480


>gi|83309126|ref|YP_419390.1| leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
 gi|123768100|sp|Q2WBE4|SYL_MAGMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|82943967|dbj|BAE48831.1| Leucyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
          Length = 862

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 10/97 (10%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           I P   + YV    P      H+G+ R   + DV+ R  R       V +          
Sbjct: 35  IAPGKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKGFN--VLHPMGWDAFGLP 92

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
               A      I  N   +  T +N     +    + 
Sbjct: 93  AENAA------IQNNVHPAKWTRENIAAMREQLKSMG 123


>gi|55378546|ref|YP_136396.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|68565966|sp|Q5V1B3|SYM_HALMA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|55231271|gb|AAV46690.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 717

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 23/148 (15%)

Query: 17  EFQAIDPSNIRMYVCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           EF    P+ +    CG P      H+G+ R  +  D L R LR     +   +V      
Sbjct: 5   EFPTDQPAVV---TCGLPYANGDLHVGHLRTYVDGDALSRALRRIG--QQTAFVSGSDMH 59

Query: 76  DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ---- 131
              +   A +E        A         + + +   +       +      H       
Sbjct: 60  GTPVAVNAAEE------GVAPREFALDFHETYAETFPQFNIEFDNY-----GHTDDETNV 108

Query: 132 --MIYLIQNIILHGHAYEANNEIIFDTS 157
                 +++ + + H +E   E+ +DT 
Sbjct: 109 ELTQEFVRSWVENDHVHEKEIEVAWDTE 136


>gi|68171281|ref|ZP_00544682.1| Aminoacyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
 gi|67999296|gb|EAM85944.1| Aminoacyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
           Sapulpa]
          Length = 808

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q+   +      NI I    L  +  KMSKS GN +T N+LLE        + A V+R
Sbjct: 500 ILQAYYHNNDIPWKNIMISGWCLAEDKTKMSKSKGNTLTPNKLLE-------EYGADVVR 552

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                +       F+   L   +   +K    S 
Sbjct: 553 YWAANSKLGADTTFSNDVLKLGKRFTTKLWNASK 586


>gi|116511600|ref|YP_808816.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
 gi|116107254|gb|ABJ72394.1| methionyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
          Length = 666

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 8/62 (12%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C A  IE    ++ H G+L ++  KMSKS GN +    L+E        +    +R  ++
Sbjct: 285 CKALGIEPPKQVFAH-GWLLMKDGKMSKSKGNVVYPEMLIER-------YGLDAVRYYLM 336

Query: 313 MT 314
             
Sbjct: 337 RA 338


>gi|34581330|ref|ZP_00142810.1| valyl-tRNA synthetase [Rickettsia sibirica 246]
 gi|28262715|gb|EAA26219.1| valyl-tRNA synthetase [Rickettsia sibirica 246]
          Length = 812

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 16/113 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I ++          NI + +G+ L  +  KMSKS GN +   
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNI-MVSGWCLAEDRSKMSKSKGNVLVPE 548

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 549 KLLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNAAK 594


>gi|307130050|ref|YP_003882066.1| leucyl-tRNA synthetase [Dickeya dadantii 3937]
 gi|306527579|gb|ADM97509.1| leucyl-tRNA synthetase [Dickeya dadantii 3937]
          Length = 860

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F    +P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEEPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T  N +        L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIEYMKNQLKLLG 116


>gi|226222806|ref|YP_002756913.1| methionyl-tRNA synthetase [Listeria monocytogenes Clip81459]
 gi|254992034|ref|ZP_05274224.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
 gi|225875268|emb|CAS03965.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           CLIP 80459]
          Length = 664

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 128

Query: 154 FDTS 157
           +  S
Sbjct: 129 YSVS 132


>gi|269214495|ref|ZP_05986692.2| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
 gi|269209638|gb|EEZ76093.1| leucine--tRNA ligase [Neisseria lactamica ATCC 23970]
          Length = 967

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 113 RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 163

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 164 -----VMQPMGWD---AFGMPAENAAMKHNVAPAAWTYDNIEYMKTQLKSLGF--AIDWE 213

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 214 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 250



 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 724 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 776

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 777 RRLWRTVYEYLKQGKAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 834

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K           A  +L
Sbjct: 835 IAAVMELLNQYDKTDTGGEQGRTVAQEVL 863


>gi|217965737|ref|YP_002351415.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|217335007|gb|ACK40801.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
 gi|307569716|emb|CAR82895.1| metS [Listeria monocytogenes L99]
          Length = 665

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 129

Query: 154 FDTS 157
           +  S
Sbjct: 130 YSVS 133


>gi|198284383|ref|YP_002220704.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218666133|ref|YP_002427048.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
 gi|226695270|sp|B7J7Y5|SYM_ACIF2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|226695271|sp|B5ENA8|SYM_ACIF5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|198248904|gb|ACH84497.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218518346|gb|ACK78932.1| methionyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
           23270]
          Length = 678

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 32/85 (37%), Gaps = 12/85 (14%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A             I+ H G L + G KMSKS G  IT  + L 
Sbjct: 287 HFIGKDIIYFHGLFWPAMLK-GSGHRLPTGIFAH-GHLTVNGAKMSKSRGTSITARQYL- 343

Query: 294 TKKFGGRSWPAPVIRLAM---LMTH 315
                 +      +R  +   L +H
Sbjct: 344 ------QHLNPEFLRYYIATKLNSH 362


>gi|172036861|ref|YP_001803362.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
 gi|171698315|gb|ACB51296.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
          Length = 535

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 9/83 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H     A    A        I+ H GFL  +G+KM KS GN +   
Sbjct: 262 PINLHLIGKDILRFHAIYWPAMLMSAKLPLP-QKIFGH-GFLTKDGQKMGKSLGNTLDPF 319

Query: 290 ELLETKKFGGRSWPAPVIRLAML 312
           EL++        + A  +R   L
Sbjct: 320 ELVD-------KYGADAVRYYFL 335


>gi|46906409|ref|YP_012798.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
 gi|67461803|sp|Q724N6|SYM_LISMF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|46879673|gb|AAT02975.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
           F2365]
          Length = 665

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 129

Query: 154 FDTS 157
           +  S
Sbjct: 130 YSVS 133


>gi|15892976|ref|NP_360690.1| valyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
 gi|81527972|sp|Q92GR9|SYV_RICCN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15620172|gb|AAL03591.1| valyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
          Length = 812

 Score = 38.3 bits (88), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 16/113 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I ++          NI + +G+ L  +  KMSKS GN +   
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNI-MVSGWCLAEDRSKMSKSKGNVLVPE 548

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 549 KLLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNAAK 594


>gi|323140336|ref|ZP_08075268.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
 gi|322415194|gb|EFY05981.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
          Length = 653

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 16/65 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-----EPIDF 322
           +G+L ++G KMSKS GN I    L++        + A  IR  +L    R        +F
Sbjct: 288 HGWLVVDGDKMSKSKGNVIDPLGLID-------EFGADAIRYFLL----REINLGSDGNF 336

Query: 323 TVQRL 327
           +   L
Sbjct: 337 SRDAL 341


>gi|309379503|emb|CBX21869.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 50/149 (33%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKHNVAPAAWTYDNIEYMKTQLKSLGF--AIDWE 122

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 123 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159


>gi|258424475|ref|ZP_05687354.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845344|gb|EEV69379.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 657

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT----NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
             +      +   +L         R T     H+ + ++  + ++  G  Y    E  + 
Sbjct: 72  LDEMIAGIKQLWAKLEISNDDF-IRTTKERHKHVVEQVF--ERLLKQGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETYY 135


>gi|257470691|ref|ZP_05634781.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|317064897|ref|ZP_07929382.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
 gi|313690573|gb|EFS27408.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
          Length = 869

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 15/130 (11%)

Query: 23  PSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           P     YV     Y     H+G+AR   + DV+ R  R       V +            
Sbjct: 30  PGKENYYVLEMLPYPSGKLHVGHARNYTIGDVISRYKRMKGYN--VLHPMGWDSFGLPAE 87

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ--- 137
             A Q           ++ T  N +   +    L       +    ++ P+     Q   
Sbjct: 88  NAAIQNGAH------PAVWTKSNIENMKRQLKMLGFSY-DWEREIASYTPEYYRWNQWIF 140

Query: 138 -NIILHGHAY 146
             +   G  Y
Sbjct: 141 KRLYEKGLIY 150


>gi|290892267|ref|ZP_06555262.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
 gi|290558093|gb|EFD91612.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
          Length = 664

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 128

Query: 154 FDTS 157
           +  S
Sbjct: 129 YSVS 132


>gi|239999868|ref|ZP_04719792.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240015623|ref|ZP_04722163.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 684

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 72/188 (38%), Gaps = 23/188 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 298 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 355

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 356 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 408

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARES---TKNHDLLPIFNASAHILGI-EVCKEHLNK 403
                  L +    VS    L KLA ES    + ++      A   I+ + ++  E+++ 
Sbjct: 409 AKRFEGRLKD----VSGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDA 464

Query: 404 NISIAIEK 411
           N    + K
Sbjct: 465 NKPWELAK 472


>gi|238651004|ref|YP_002916860.1| valyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
 gi|259516952|sp|C4K2L1|SYV_RICPU RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|238625102|gb|ACR47808.1| valyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
          Length = 812

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           +DL    HE         I ++          NI I    L  +  KMSKS GN +   +
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNIMISGWCLAEDRSKMSKSKGNVLVPEK 549

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 550 LLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNAAK 594


>gi|22298292|ref|NP_681539.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
 gi|25009348|sp|P59081|SYM_THEEB RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|22294471|dbj|BAC08301.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
          Length = 529

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 39/124 (31%), Gaps = 11/124 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A   I  DVL R  R    +     VR IT  D+      + E  +     
Sbjct: 14  VNALPHIGSAYTTIAADVLARFYRLQGYQ-----VRFITGTDEH---GQKIERTAQQRGL 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +      +    F     +L         R T+  H   +    Q +  +G  Y    + 
Sbjct: 66  SPQAHCDEIAAGFQALWQQLNIHY-DRFSRTTSPRHHAIVNEFFQRVWDNGDIYLGQQQG 124

Query: 153 IFDT 156
            +  
Sbjct: 125 WYCV 128



 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 9/83 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H  +  A    A  +     I++H GFL  +G+KM KS GN +   
Sbjct: 256 PINLHIIGKDILRFHGISWPAMLMSA-GLPLPEQIFVH-GFLTKDGQKMGKSLGNTLDPF 313

Query: 290 ELLETKKFGGRSWPAPVIRLAML 312
            L+         + A  +R   +
Sbjct: 314 ALVA-------QYGADAVRYYFM 329


>gi|22474523|dbj|BAC10608.1| leucyl-tRNA synthetase [Thermococcus kodakaraensis]
          Length = 967

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 52/165 (31%), Gaps = 17/165 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DLI  H    I         +        NGF  LEG+KMSK  G      
Sbjct: 603 PLDWRCSAKDLIPNHLTFFIFNHVAIFDKKHWPKGIAVNGFGTLEGQKMSKRQGQV---- 658

Query: 290 ELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
              +   +      A V+RL ++ +  +    D+  + + +    + ++ +  +     +
Sbjct: 659 ---QNFIYAIEENGADVVRLYIMGLAEHDSDFDWRRKEVGKLRKQVERFYELVSEFATYE 715

Query: 349 PAVLSALYNDLNTVSAIQA--LHKLARESTKNHDLLPIFNASAHI 391
                 L +       I    LH+L +        L  F     +
Sbjct: 716 AKEGVELKD-------IDRWMLHRLNKAIEGATKALEEFRTRTAV 753



 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 5/63 (7%)

Query: 16 TEFQA---IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
            F+      P   + Y+     Y     H+G+AR   + DV+ R  R            
Sbjct: 21 RVFEPDRKAKPKEKKFYITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYNVLFPMGW 80

Query: 71 NIT 73
          +IT
Sbjct: 81 HIT 83


>gi|332638200|ref|ZP_08417063.1| isoleucyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 929

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 48/134 (35%), Gaps = 13/134 (9%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                    ++      L+  G KMSKS GN I+ NE++       +   A +IRL +  
Sbjct: 573 AVTGKAPYKSVLSQGFVLDGNGEKMSKSLGNIISPNEVV-------KEMGAEIIRLWVTS 625

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AIQA 367
                 +  ++  L++      K   T      +    DP   +  ++DL          
Sbjct: 626 VDSSADVRVSMDLLSQTSETYRKIRNTMRFLLANTADFDPKADTIAFDDLVAADQYFYAR 685

Query: 368 LHKLARESTKNHDL 381
            +KL  +    +D+
Sbjct: 686 FNKLVADIKAAYDV 699


>gi|251790453|ref|YP_003005174.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591]
 gi|247539074|gb|ACT07695.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591]
          Length = 677

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 71/186 (38%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLE-GSGFRKPTNLFVH-GYVTVNGAKMSKSRGTFIKADTYL- 347

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                 +   A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 348 ------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 399

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L + L   +  Q     A+   + +       A   I+ + ++   ++++  
Sbjct: 400 INKRFDGQLADQLADAALYQTFIDAAQTIAEAYGSRESGKAIREIMALADLANRYVDEQA 459

Query: 406 SIAIEK 411
              + K
Sbjct: 460 PWVVAK 465


>gi|169829851|ref|YP_001700009.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
 gi|168994339|gb|ACA41879.1| Methionyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
          Length = 551

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 8/76 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R     + V YV         I  RA QE      N     I
Sbjct: 24  HLGHVAALLPGDILARYYRQKG--EQVLYVSGSDCNGTPISIRAAQE------NTTTEAI 75

Query: 100 TSKNTQQFVKDTTRLA 115
            +   ++F K   +L 
Sbjct: 76  ANHYHEEFKKCFNKLG 91


>gi|150398390|ref|YP_001328857.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
 gi|166231646|sp|A6UEE2|SYL_SINMW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|150029905|gb|ABR62022.1| leucyl-tRNA synthetase [Sinorhizobium medicae WSM419]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 58/182 (31%), Gaps = 51/182 (28%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAE 331
            KMSKS  N +  ++++        S+ A   R  +L      P D    ++   +  A 
Sbjct: 631 EKMSKSKKNVVDPDDIIA-------SYGADTARFFVLS---DSPPDRDVIWSEAGVEGAH 680

Query: 332 ILLSK-WPQTSTSKGIIDPA----------------------VLSALYNDLNTVSAIQAL 368
             + + W   S +   +  A                       + A Y+ L    A+  +
Sbjct: 681 RFVQRVWRLLSEAAEGLSAAEAAPAREGEGLAVSQAAHRTLKAVEADYDKLAFNKAVARI 740

Query: 369 HKLAR----------ESTKNHDLLPIFNASAHIL--GIEVCKEHLNKNISIAI--EKLVQ 414
           ++L                +  L      +A IL   I     HL +    AI  + L+ 
Sbjct: 741 YELVNTLAAPLAQIAAGKADQALTAAVKDAAGILISLIAPMMPHLAEECWRAIGGKGLIA 800

Query: 415 ER 416
           ER
Sbjct: 801 ER 802


>gi|119719048|ref|YP_919543.1| isoleucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
 gi|119524168|gb|ABL77540.1| Isoleucyl-tRNA synthetase [Thermofilum pendens Hrk 5]
          Length = 1062

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           A        + +H   L+ +GR+M KS GN++   ++LE  ++G R     V R  +L  
Sbjct: 580 AFDRSPYLRVLMHGFALDEQGREMHKSLGNYVEPRQVLE-YEYGSR----DVFRWFVLKN 634

Query: 315 HYREPIDFTVQRLTEAEILLS 335
              E + F+ + L E    L+
Sbjct: 635 TVWEDLRFSWRGLEETYSDLN 655


>gi|157164498|ref|YP_001466839.1| valyl-tRNA synthetase [Campylobacter concisus 13826]
 gi|112801275|gb|EAT98619.1| valyl-tRNA synthetase [Campylobacter concisus 13826]
          Length = 918

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 60/165 (36%), Gaps = 18/165 (10%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           Q   A       +I++H    +  GRKMSKS GN I   + +         + A V+R  
Sbjct: 552 QGENALGKLPFDDIYLHALVKDEFGRKMSKSLGNVIDPLDSIN-------EYSADVLRFT 604

Query: 310 -AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI--- 365
             +L    R  I  +  ++ +     +K    S    + +    +     L T   I   
Sbjct: 605 LTLLAVQGR-DIKLSDAKMKQVRNFTNKLYNASKYLMLNESKFPNLEDIKLQTKLGIYMN 663

Query: 366 QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
              ++  RE  +N D    FN +A+ L     K   ++     IE
Sbjct: 664 SRFNECVREVRENIDAYR-FNDAANTL----YKFLWDEFCDWGIE 703


>gi|88658365|ref|YP_506964.1| valyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
 gi|88599822|gb|ABD45291.1| valyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
          Length = 808

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 36/94 (38%), Gaps = 7/94 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q+   +      NI I    L  +  KMSKS GN +T N+LLE        + A V+R
Sbjct: 500 ILQAYYHNNDIPWKNIMISGWCLAEDKTKMSKSKGNTLTPNKLLE-------EYGADVVR 552

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                +       F+   L   +   +K    S 
Sbjct: 553 YWAANSKLGADTTFSNDVLKLGKRFTTKLWNASK 586


>gi|257387346|ref|YP_003177119.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169653|gb|ACV47412.1| arginyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 591

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 21/133 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQ 85
           PT     H+G AR  I+ D L R+L Y   +    Y  N       +     +  +    
Sbjct: 125 PT--GPVHVGRARNPIIGDALARVLDYAGYDVDRHYYVNDAGRQMAVFTWAYETFDEDDL 182

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG-- 143
             P     +   +   +    F+++           + +A          I   +  G  
Sbjct: 183 PEPERDSPEYEMVRYYRKGNSFLEEADADRVEDAESEIQA----------ILQGLEAGDE 232

Query: 144 HAYEANNEIIFDT 156
            AYE   E++   
Sbjct: 233 DAYERVGEVVDTV 245


>gi|315230637|ref|YP_004071073.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
 gi|315183665|gb|ADT83850.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
          Length = 647

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 9/73 (12%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  I+ D + R++R          V+N   IDD  I+ A+     + + +   
Sbjct: 139 PLHMGHARNSILGDTMARVMRTLGYNVE---VQNY--IDDLGIQFAQVMWGYLNLKEEFE 193

Query: 98  ----IITSKNTQQ 106
                I  +  ++
Sbjct: 194 KIKAEIEERCIKE 206


>gi|91781601|ref|YP_556807.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400]
 gi|123359228|sp|Q146I4|SYR_BURXL RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|91685555|gb|ABE28755.1| arginyl-tRNA synthetase [Burkholderia xenovorans LB400]
          Length = 596

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 50/325 (15%), Positives = 97/325 (29%), Gaps = 62/325 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   + D L  +L     +    +  N   +  + +  + Q       
Sbjct: 141 PT--GPLHVGHGRQAALGDALSNVLASQGWDVHREFYYNDAGVQIQTLALSTQARARGLA 198

Query: 93  NDAISIITSKNTQQFVKDTTR--LA---CLAPTHQPRATNHIP-QMIYLIQNIILHGHAY 146
                   S    +++ D  +  L      A   +P  T     + +  I+       AY
Sbjct: 199 PGDEGWPASAYNGEYIADIAKDYLNGATVAASDGEP-VTGARDVEDLEAIRRFA---VAY 254

Query: 147 ---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP--EKYHKKNPADFILWKRSTPME 201
              E + ++         Y         E ++   V       K    +  LW R+T   
Sbjct: 255 LRREQDMDLQAFGVKFDQY-YLESSLYKEGRVEKTVAALIAAGKTYEQEGALWLRTTDDG 313

Query: 202 P-------GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
                     +  +    P   +H+   A       KV +I G        HH   IA+ 
Sbjct: 314 DDKDRVMRKTDGTYTYFVPDVAYHV---AKWERGFTKVINIQGSD------HH-GTIARV 363

Query: 253 CCADRI------EKTANIWIHNGFLNL--EGR--KMSKSNGNFITINELLETKKFGGRSW 302
               +       +   +  +H   + +   G   K+SK  G+++T+ +L+E         
Sbjct: 364 RAGLQGLGIGIPKGYPDYILHK-MVTVMRNGEEVKISKRAGSYVTVRDLIEWSGGATPGS 422

Query: 303 PAPV--------------IRLAMLM 313
              V              +R  ++ 
Sbjct: 423 EVDVDLIDEETIRRGRDAVRFFLIS 447


>gi|16802223|ref|NP_463708.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|224500370|ref|ZP_03668719.1| methionyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
 gi|224503503|ref|ZP_03671810.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
 gi|254829268|ref|ZP_05233955.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|254832524|ref|ZP_05237179.1| methionyl-tRNA synthetase [Listeria monocytogenes 10403S]
 gi|254901038|ref|ZP_05260962.1| methionyl-tRNA synthetase [Listeria monocytogenes J0161]
 gi|254913894|ref|ZP_05263906.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
 gi|254938315|ref|ZP_05270012.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|255026302|ref|ZP_05298288.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
 gi|255029121|ref|ZP_05301072.1| methionyl-tRNA synthetase [Listeria monocytogenes LO28]
 gi|25009372|sp|Q8YAF2|SYM_LISMO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16409534|emb|CAC98392.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
 gi|258601679|gb|EEW15004.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
 gi|258610927|gb|EEW23535.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
 gi|293591911|gb|EFG00246.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
          Length = 664

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 128

Query: 154 FDTS 157
           +  S
Sbjct: 129 YSVS 132


>gi|260459773|ref|ZP_05808027.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
 gi|259034575|gb|EEW35832.1| valyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
          Length = 927

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 40/98 (40%), Gaps = 10/98 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  +   + ++Y     D+   G DLIF      +         E    +++H    + 
Sbjct: 511 GWPDQTPELKTYY---QTDVLVTGFDLIFFWVARMMMMGLHFMDEEPFHTVYMHALVRDK 567

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
            G+KMSKS GN +   +L++        + A  +R  +
Sbjct: 568 NGQKMSKSKGNVVDPLDLID-------EYGADALRFTL 598


>gi|197294428|ref|YP_001798969.1| isoleucyl-tRNA synthetase [Candidatus Phytoplasma australiense]
 gi|171853755|emb|CAM11681.1| Isoleucyl-tRNA synthetase [Candidatus Phytoplasma australiense]
          Length = 896

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 7/121 (5%)

Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
           S  S     +  DI+  G D       + +  S  A +      +  H   L+ +G+KMS
Sbjct: 530 SGTSHSLCPQTSDIYLEGSDQYRGWFNSSLITSTAAFKKAPYKTVITHGFVLDGQGKKMS 589

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
           KS GN I                 A +IRL     +Y   +      LT+ E +  K   
Sbjct: 590 KSLGNVI-------DPLIIASQKGADIIRLWAANVNYNFDVRINNDILTQIEDIYRKIRN 642

Query: 340 T 340
           T
Sbjct: 643 T 643


>gi|150402180|ref|YP_001329474.1| glutamyl-tRNA synthetase [Methanococcus maripaludis C7]
 gi|187645677|sp|A6VFU7|SYE_METM7 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|150033210|gb|ABR65323.1| glutamyl-tRNA synthetase [Methanococcus maripaludis C7]
          Length = 555

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 30/141 (21%)

Query: 10  TLERKIT-EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           T  ++   E + +  + +  +   P      HIG+AR  ++ D       ++  +     
Sbjct: 78  TERKRKEIELKNVKGNVVMRFA--PNPSGPLHIGHARASVLND-------FFTKKYNGKL 128

Query: 69  VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
           V  + D D      A++  P             +  Q   +D   L         + +  
Sbjct: 129 VLRLEDTD------AKRVLPE----------AYEMIQ---EDLKWLGVKVDEVIVQ-SER 168

Query: 129 IPQMIYLIQNIILHGHAYEAN 149
           +       + +I  GHAY  +
Sbjct: 169 LEIYYEYGRKLIEMGHAYVCD 189


>gi|119488654|ref|XP_001262777.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
 gi|119410935|gb|EAW20880.1| isoleucyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
          Length = 1010

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 53/162 (32%), Gaps = 36/162 (22%)

Query: 203 GW---ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG---GLDLIFPHHENEIAQSCCAD 256
            W   ++P   G P         +  YL    D H G      L +  H  ++A    A 
Sbjct: 563 SWTEIDTPPRDGYP---------ADVYLEGT-DQHRGWFQSGLLTYISH--QLASGQTAT 610

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL------------------ETKKFG 298
                 N+  H   L+ EGRKMSKS GN I    ++                  E K+  
Sbjct: 611 PRAPFKNLVTHGFTLDEEGRKMSKSIGNVIHPQSIMDGTLLPPLKPRKGKGKQQENKEPV 670

Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             +     +R+    + Y   +    Q L      L K+  T
Sbjct: 671 YDALGPDALRMWAASSDYTRDVVIGKQVLQTVNTSLHKFRVT 712


>gi|47458993|ref|YP_015855.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
 gi|81614378|sp|Q6KID2|SYV_MYCMO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|47458321|gb|AAT27644.1| valyl-tRNA synthetase [Mycoplasma mobile 163K]
          Length = 839

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 12/92 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
                 IH    + +GRKMSKS GN I   +L+E        + A  +R  ++      P
Sbjct: 500 PFKKALIHGLIRDEQGRKMSKSLGNGIDPMDLIE-------KYGADSLRWFLMTNS--TP 550

Query: 320 ---IDFTVQRLTEAEILLSKWPQTSTSKGIID 348
              I F   ++  A  L++K    S    ++D
Sbjct: 551 GQDIRFNYDKIESAWSLINKIWNISRYIKMLD 582


>gi|91977188|ref|YP_569847.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
 gi|91683644|gb|ABE39946.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
          Length = 514

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     K V ++    +   K+I+ A++E        
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGLKMIQTAQKEGIETH--- 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
              ++ ++N  +F +D      ++     R +   H   +  + + +  +G  Y  +   
Sbjct: 71  ---VLAARNAGRF-RDMDDRFGVSYDRFIRTSEEQHHRSVQEVWKRMQANGDIYLDSYAG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAYY 136


>gi|47096170|ref|ZP_00233769.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284803084|ref|YP_003414949.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284996225|ref|YP_003417993.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
 gi|47015418|gb|EAL06352.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
 gi|284058646|gb|ADB69587.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
 gi|284061692|gb|ADB72631.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
          Length = 665

 Score = 38.3 bits (88), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 129

Query: 154 FDTS 157
           +  S
Sbjct: 130 YSVS 133


>gi|331006482|ref|ZP_08329783.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
 gi|330419707|gb|EGG94072.1| Isoleucyl-tRNA synthetase [gamma proteobacterium IMCC1989]
          Length = 943

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 7/87 (8%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
           +       +  H   ++  G+KMSKS GN I   +++           A V+RL +  T 
Sbjct: 581 NGEPPYKQVLTHGFTVDANGKKMSKSVGNVIPPQKVMNDLG-------ADVLRLWVSATD 633

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTST 342
           +   +  + + L        +   T+ 
Sbjct: 634 FSAEMSVSDEILKRTADSYRRIRNTAR 660


>gi|325133537|gb|EGC56200.1| leucyl-tRNA synthetase [Neisseria meningitidis M13399]
          Length = 910

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 667 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 719

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 720 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 777

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 778 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 806


>gi|240114715|ref|ZP_04728777.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268600362|ref|ZP_06134529.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|268584493|gb|EEZ49169.1| methionyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
          Length = 684

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 70/196 (35%), Gaps = 25/196 (12%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 298 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 355

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+ T   L +    ++     K+    + + G I
Sbjct: 356 ------QGLNPEWMRYYI-AAKLNSKIEDTDLNLQDFISRVNSDLVGKYVNIAARASGFI 408

Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLPIFNASAHILGIEVCKEHL 401
                  L +    VS    L KLA ES       +N +          +  I       
Sbjct: 409 AKRFEGRLKD----VSGSALLAKLAAESDTIAEQYENREYARALRDIMALADIVNEYVDA 464

Query: 402 NKNISIAIEKLVQERL 417
           NK   +A ++   ERL
Sbjct: 465 NKPWELAKQEGQDERL 480


>gi|282911292|ref|ZP_06319094.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324987|gb|EFB55297.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312437877|gb|ADQ76948.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|226226873|ref|YP_002760979.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
 gi|226090064|dbj|BAH38509.1| arginyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
          Length = 561

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/186 (12%), Positives = 56/186 (30%), Gaps = 49/186 (26%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN- 71
           R + EF + +P+       GP      H+G+ R   + D +  LL +        +  N 
Sbjct: 128 RVVVEFVSANPT-------GP-----LHVGHGRQAALGDAISTLLEWTGWNVDREFYYND 175

Query: 72  ----ITDIDDKIIERARQEHPSIPI-------NDAISIITSKN------------TQQFV 108
               I ++      R R+   +           + I  I  +              +   
Sbjct: 176 AGAQIANLAKSTQARVREIGGAELEIPEGGYHGEYIREIAERYVAQHAVDAEGKDLEAMR 235

Query: 109 K------------DTTRLACLAPTHQPRATNHIPQMIY-LIQNIILHGHAYEANNEIIFD 155
           +            D         T+   ++ +    +   ++ +   G+ +E N  +   
Sbjct: 236 EFAVAALRHEQDLDLQAFGVKFDTYYLESSLYTDGRVDKTVEALKQSGYTFEDNGALFLR 295

Query: 156 TSSIPN 161
           T++  +
Sbjct: 296 TTAFGD 301


>gi|288576165|ref|ZP_05978301.2| leucine--tRNA ligase [Neisseria mucosa ATCC 25996]
 gi|288566078|gb|EFC87638.1| leucine--tRNA ligase [Neisseria mucosa ATCC 25996]
          Length = 878

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKW----PQTSTSKGIIDP--------------------AVLSALYND------LNTVSA 364
            +      +     G +                      A  + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTSGEQGRAVAQEVL 774


>gi|222616493|gb|EEE52625.1| hypothetical protein OsJ_34962 [Oryza sativa Japonica Group]
          Length = 377

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               + N+ + + +LV  R    K + + SAD +   L+  G+ +
Sbjct: 200 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 244


>gi|149183948|ref|ZP_01862330.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
 gi|148848344|gb|EDL62612.1| isoleucyl-tRNA synthetase [Bacillus sp. SG-1]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 54/134 (40%), Gaps = 15/134 (11%)

Query: 254 CADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                     +  H GF+N  EGRKMSKS GN +  ++++       +   A ++RL + 
Sbjct: 585 AVTGKAPYKGVLSH-GFVNDGEGRKMSKSIGNIVVPDKVI-------KQMGADILRLWVA 636

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS--AIQ 366
              Y+  +  +   L +   +  K   T      +    +P   +  Y++L  V    + 
Sbjct: 637 SVDYQADVRLSDAILKQVSEVYRKIRNTYRFLLGNLADFNPEKDAISYDNLREVDQFMLV 696

Query: 367 ALHKLARESTKNHD 380
            L+ L +  T  ++
Sbjct: 697 KLNDLIKSVTTAYE 710


>gi|258424081|ref|ZP_05686963.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
 gi|257845702|gb|EEV69734.1| valyl-tRNA synthetase [Staphylococcus aureus A9635]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|261379368|ref|ZP_05983941.1| leucine--tRNA ligase [Neisseria subflava NJ9703]
 gi|284797811|gb|EFC53158.1| leucine--tRNA ligase [Neisseria subflava NJ9703]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|157737467|ref|YP_001490150.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
 gi|157699321|gb|ABV67481.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
          Length = 650

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 13/125 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D AHIG+A   I+ D+L R  R        T++   TD         +    +   N 
Sbjct: 17  VNDVAHIGHAYTTIIADMLARYSRLTGSN---TFLLTGTD-----EHGQKIAQSAEIRNK 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGHAYEANNE 151
                  + + +F                R T+    I       + +   G  Y+   E
Sbjct: 69  TPKEYADEISGKFRTLWDDFDITY-DKFIRTTDEEHKIGVQKAF-EIMYKKGDIYKGEYE 126

Query: 152 IIFDT 156
             +  
Sbjct: 127 GFYCV 131



 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 10/98 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D++  H     A     D           +G+   +G KMSKS GN +   E+ 
Sbjct: 259 IHLVGKDILRFHSIYWPAFLMSLDL--PLPKHIAAHGWWTRDGEKMSKSKGNIVNPKEVA 316

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           +       ++     R  ML    + +  DF+ + L +
Sbjct: 317 D-------AYGLDAFRYFMLREVPFGQDGDFSQKALID 347


>gi|148239464|ref|YP_001224851.1| methionyl-tRNA synthetase [Synechococcus sp. WH 7803]
 gi|147848003|emb|CAK23554.1| Methionyl-tRNA synthetase [Synechococcus sp. WH 7803]
          Length = 514

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 9/81 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D++  H     A    A  +     ++ H GFL  EG+KM K+ GN +    L
Sbjct: 254 DVHVIGKDILRFHAVYWPAMLMSA-GLPVPKRVFGH-GFLTREGQKMGKALGNVLDPEIL 311

Query: 292 LETKKFGGRSWPAPVIRLAML 312
           LE             +R  +L
Sbjct: 312 LERCGT-------DAVRWYLL 325


>gi|315637191|ref|ZP_07892413.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
 gi|315478558|gb|EFU69269.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
          Length = 650

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 38/125 (30%), Gaps = 13/125 (10%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D AHIG+A   I+ D+L R  R        T++   TD         +    +   N 
Sbjct: 17  VNDVAHIGHAYTTIIADMLARYSRLTGSN---TFLLTGTD-----EHGQKIAQSAEIRNK 68

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGHAYEANNE 151
                  + + +F                R T+    I       + +   G  Y+   E
Sbjct: 69  TPKEYADEISGKFRTLWDDFDITY-DKFIRTTDEEHKIGVQKAF-EIMYKKGDIYKGEYE 126

Query: 152 IIFDT 156
             +  
Sbjct: 127 GFYCV 131



 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 10/98 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D++  H     A     D           +G+   +G KMSKS GN +   E+ 
Sbjct: 259 IHLVGKDILRFHSIYWPAFLMSLDL--PLPKHIAAHGWWTRDGEKMSKSKGNIVNPKEVA 316

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           +       ++     R  ML    + +  DF+ + L +
Sbjct: 317 D-------AYGLDAFRYFMLREVPFGQDGDFSQKALID 347


>gi|257425780|ref|ZP_05602204.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257428446|ref|ZP_05604844.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257431080|ref|ZP_05607457.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433763|ref|ZP_05610121.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257436679|ref|ZP_05612723.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282904236|ref|ZP_06312124.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|282906061|ref|ZP_06313916.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908976|ref|ZP_06316794.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282914461|ref|ZP_06322247.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282919430|ref|ZP_06327165.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282924807|ref|ZP_06332473.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|283958416|ref|ZP_06375867.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503539|ref|ZP_06667386.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510553|ref|ZP_06669258.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|293537096|ref|ZP_06671776.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428236|ref|ZP_06820865.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590801|ref|ZP_06949439.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|257271474|gb|EEV03620.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257275287|gb|EEV06774.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278028|gb|EEV08676.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281856|gb|EEV11993.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus E1410]
 gi|257284030|gb|EEV14153.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M876]
 gi|282313173|gb|EFB43569.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C101]
 gi|282317240|gb|EFB47614.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus C427]
 gi|282321642|gb|EFB51967.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
 gi|282327240|gb|EFB57535.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331353|gb|EFB60867.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595854|gb|EFC00818.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
 gi|283790565|gb|EFC29382.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919941|gb|EFD97009.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095205|gb|EFE25470.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466444|gb|EFF08965.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus M809]
 gi|295127636|gb|EFG57273.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575687|gb|EFH94403.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
 gi|315195567|gb|EFU25954.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|222087922|ref|YP_002546460.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
 gi|221725370|gb|ACM28526.1| leucyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/127 (15%), Positives = 36/127 (28%), Gaps = 13/127 (10%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              AR        
Sbjct: 43  PYPSGRIHMGHVRNYAMGDVVARYKRARGYN--VLHPMGWDAFGMPAENAARDNKVH--- 97

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYLIQNIILHGHAYEA 148
                  T +N          +       +  AT  +     Q +  I  ++  G  Y  
Sbjct: 98  ---PKEWTYQNIASMKAQLKAMGLSLDWSREFATCDVEYYHRQQMLFID-MMQKGLIYRK 153

Query: 149 NNEIIFD 155
            +++ +D
Sbjct: 154 KSKVNWD 160


>gi|49483906|ref|YP_041130.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
 gi|81650951|sp|Q6GG42|SYV_STAAR RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|49242035|emb|CAG40734.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA252]
          Length = 876

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|114320013|ref|YP_741696.1| isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312139|sp|Q0AAD1|SYI_ALHEH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|114226407|gb|ABI56206.1| Isoleucyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 941

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN +   ++++T         A ++RL +  + Y   +  +   
Sbjct: 593 HGFTVDEKGHKMSKSRGNVVAPQKVMDTLG-------ADILRLWVASSDYSAEMAVSDGI 645

Query: 327 LTEAEILLSKWPQTST 342
           L        +   T+ 
Sbjct: 646 LKRTADAYRRMRNTAR 661


>gi|226953520|ref|ZP_03823984.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
 gi|226835737|gb|EEH68120.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
          Length = 721

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    +      NGFL + G+KMSKS G FI     L 
Sbjct: 321 HFIGKDIVYFHALFWPAMLEGANYRTPSGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 377

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 378 ------QHLNPEYLRYYFAS 391


>gi|167629315|ref|YP_001679814.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
 gi|167592055|gb|ABZ83803.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
          Length = 668

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 45/135 (33%), Gaps = 20/135 (14%)

Query: 33  PTVY---------DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
           PT Y            HIG+A   +  D + R  R    +  V ++  + +   KI   A
Sbjct: 7   PTFYITTPIYYPSGNPHIGHAYTTVATDTMARYKRLRGCD--VWFLTGLDEHGQKIERAA 64

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIIL 141
           + +  +         +T      F K   RL         R T   H   +  + Q I  
Sbjct: 65  QGKGMAPIDYLDPVAVT------FKKLWERLEITYDDF-IRTTEERHKKAVQVIFQKIWD 117

Query: 142 HGHAYEANNEIIFDT 156
            G  Y++  E  + T
Sbjct: 118 KGDIYKSEYEGWYCT 132


>gi|154312483|ref|XP_001555569.1| hypothetical protein BC1G_05844 [Botryotinia fuckeliana B05.10]
 gi|150849945|gb|EDN25138.1| hypothetical protein BC1G_05844 [Botryotinia fuckeliana B05.10]
          Length = 953

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 34/98 (34%), Gaps = 11/98 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET-----------KKFGGR 300
           +           +  H   L+  G+KMSKS GN I  +++++                 +
Sbjct: 585 AVAESSEAPFKTLITHGFTLDQNGKKMSKSIGNTIAPSQIMDGSLLPPVKIKKKGGNISQ 644

Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
              A  +RL +  + Y + +      L      L K+ 
Sbjct: 645 GLGADALRLWVASSDYTKDLVIGQPVLATVNSALLKYR 682


>gi|134098273|ref|YP_001103934.1| hypothetical protein SACE_1690 [Saccharopolyspora erythraea NRRL
           2338]
 gi|291004307|ref|ZP_06562280.1| hypothetical protein SeryN2_07287 [Saccharopolyspora erythraea NRRL
           2338]
 gi|133910896|emb|CAM01009.1| hypothetical protein SACE_1690 [Saccharopolyspora erythraea NRRL
           2338]
          Length = 428

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 6/80 (7%)

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM------KKFSSADYIRK 433
           +L+ +      + G         + ++   E+L  E             +  + AD +RK
Sbjct: 108 ELVALRTEQGQLRGERDSAATRAEKLAAEAERLRAELAEAKVAVERACGQNSAEADRLRK 167

Query: 434 QLESKGFILEDYKNPDNGQR 453
           +L  +G  L++ K+     R
Sbjct: 168 RLREQGVRLKEAKDDAEAAR 187


>gi|86749798|ref|YP_486294.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
 gi|86572826|gb|ABD07383.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
          Length = 514

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 47/130 (36%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D L R  R     + V ++    +   K+I+ A++E        
Sbjct: 16  PNGAPHIGHAYEAIATDALARFQRLDG--RDVFFLTGTDEHGLKMIQTAQKEGVETH--- 70

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
              ++ ++N  +F +D      ++     R +   H   +  + + +  +G  Y  +   
Sbjct: 71  ---VLAARNAGRF-RDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIYLDSYAG 126

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 127 WYSVRDEAYY 136


>gi|18314006|ref|NP_560673.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|23822198|sp|Q8ZTA8|SYR_PYRAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|18161582|gb|AAL64855.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 630

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 16/73 (21%)

Query: 269 GFLNLEGRKMSKSNGNFITINELL----ETKKFGGRSWPAPV------------IRLAML 312
             +NL G KMS   G +I+++E+L    E      +     V            +R A L
Sbjct: 432 EMVNLPGMKMSARRGQYISLDEILDEAAERSASLVKEKNPEVSGVIAERVGVGSVRYAFL 491

Query: 313 MTHYREPIDFTVQ 325
            T  R+PI+F   
Sbjct: 492 TTSPRKPIEFKWD 504


>gi|25010601|ref|NP_734996.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
 gi|81457393|sp|Q8E6N1|SYI_STRA3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|23094954|emb|CAD46176.1| isoleucyl-tRNA synthetase [Streptococcus agalactiae NEM316]
          Length = 930

 Score = 38.3 bits (88), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +   +  K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILKQTSEIYRKIRNTLR--------FLIANTSDFN 663


>gi|269119362|ref|YP_003307539.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
 gi|268613240|gb|ACZ07608.1| leucyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
          Length = 865

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 33/135 (24%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +         +   + + A   R+  +      + +++ +  L  
Sbjct: 611 LAVKVEKMSKSKNNGV-------DPEVIVKEYGADSARVFSLFAAPPEKELEWNMNGLAG 663

Query: 330 AEILLSKW------PQTSTSKGIID-------------------PAVLSALYNDLNTVSA 364
           A   L++        +  +  G ID                     V  ++ ++ +  +A
Sbjct: 664 AYRFLNRLFLLIEDTKEFSEAGEIDHGKRNNEDSEIQKKLHQTVKKVSESMEDNFHFNTA 723

Query: 365 IQALHKLARESTKNH 379
           I AL +L  + T   
Sbjct: 724 IAALMELLNDMTSYR 738


>gi|228968150|ref|ZP_04129153.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228791542|gb|EEM39141.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
           str. T04001]
          Length = 116

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 34/91 (37%), Gaps = 10/91 (10%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G+   ++  D+L R  R     + V YV         I  RA+
Sbjct: 2   SIFIGGAWPYANGSLHLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGTPIAIRAK 59

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           QE            I +K  ++F +    L 
Sbjct: 60  QE------GVTAKEIANKYHEEFQRCFRDLG 84


>gi|157804074|ref|YP_001492623.1| valyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
 gi|166225530|sp|A8EZQ5|SYV_RICCK RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157785337|gb|ABV73838.1| valyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
          Length = 813

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 16/113 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I ++          NI + +G+ L  +  KMSKS GN +   
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNI-MVSGWCLAEDRSKMSKSKGNVLVPE 548

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 549 KLLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNAAK 594


>gi|77548346|gb|ABA91143.1| Staphylococcal nucleaseue family protein, expressed [Oryza sativa
           Japonica Group]
 gi|125575943|gb|EAZ17165.1| hypothetical protein OsJ_32671 [Oryza sativa Japonica Group]
          Length = 368

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               + N+ + + +LV  R    K + + SAD +   L+  G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235


>gi|74420524|gb|ABA04723.1| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 692

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 19/135 (14%)

Query: 35  VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           VY     HIG+A   I  D L R  R     K V ++    +   K+++ A++E      
Sbjct: 190 VYPNGAPHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGQKMVQTAQRE------ 241

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYE 147
           N +   + ++N +   K    L   +     R +       +  +    + +  +G  Y 
Sbjct: 242 NISALELATRNAELLRKLDEALDI-SFDRFIRTSESAHHRSVQDIW---KRMAGNGDIYL 297

Query: 148 ANNEIIFDTSSIPNY 162
           +N    +       Y
Sbjct: 298 SNYSGWYSVRDEAYY 312


>gi|16799293|ref|NP_469561.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
 gi|25009380|sp|Q92F90|SYM_LISIN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|16412635|emb|CAC95449.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
          Length = 664

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 128

Query: 154 FDTS 157
           +  S
Sbjct: 129 YSVS 132


>gi|304388442|ref|ZP_07370548.1| leucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
 gi|304337559|gb|EFM03722.1| leucine--tRNA ligase [Neisseria meningitidis ATCC 13091]
          Length = 912

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 669 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 721

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 722 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 779

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 780 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 808


>gi|254797222|ref|YP_003082063.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590469|gb|ACT69831.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 521

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
          V D  HIG+A   ++ DVL R LR    E   T
Sbjct: 30 VNDNPHIGHAYSSLIADVLTRALRLAGHEVRFT 62


>gi|85372673|gb|ABC70128.1| valyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 932

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 5/89 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-----QEH 87
           PTV    H G+     + D + R  R    +    +  +   I  + +         QE+
Sbjct: 83  PTVSGNLHWGHVYGFTLQDFVARFRRMRGSDVFFPFGYDDNGIASERLAEDELNVRHQEY 142

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLAC 116
                      +  +   +F +   +L  
Sbjct: 143 ERREFQQMTQEVCQQYEAEFTEKMQQLGI 171



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   ++ I+   L+    KMSKS GN I  +E++         +P    R     +
Sbjct: 562 HTGEVPFDSVMINGMVLDENREKMSKSKGNVIAPDEVIT-------EYPVDAARYWAAGS 614

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
              + + ++ + +   E LL K    S     +
Sbjct: 615 AVGDDLPYSEKGIRAGEKLLRKLWNASKLVEDL 647


>gi|313621117|gb|EFR92184.1| methionyl-tRNA synthetase [Listeria innocua FSL S4-378]
          Length = 657

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFE---QLLEQGDIYLGEYEGW 129

Query: 154 FDTS 157
           +  S
Sbjct: 130 YSVS 133


>gi|206896117|ref|YP_002247032.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738734|gb|ACI17812.1| isoleucyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
           5265]
          Length = 906

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  +  H   L+  GR MSKS GN I  ++++           A V+RLA+LM+ Y
Sbjct: 575 GQAPYKTVLSHGFVLDESGRAMSKSLGNVIDPSDVVANVG-------ADVLRLALLMSDY 627

Query: 317 REPIDFTVQRLTEAEILLSKWPQT 340
              I        +A  +  K   T
Sbjct: 628 TADIQVGQNIFNQASEIYKKIRNT 651


>gi|219684440|ref|ZP_03539384.1| lysyl-tRNA synthetase [Borrelia garinii PBr]
 gi|219672429|gb|EED29482.1| lysyl-tRNA synthetase [Borrelia garinii PBr]
          Length = 521

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 2/57 (3%)

Query: 21 IDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
           +     +Y    G T     HIGN R +I  D++ R L+    +    Y  +  D+
Sbjct: 16 KEKGPKNLYTVASGITPSGTVHIGNFREVISVDLVARALKDSGSQVRFIYSWDNYDV 72


>gi|88608152|ref|YP_506759.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600321|gb|ABD45789.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 503

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/33 (42%), Positives = 17/33 (51%)

Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
          V D  HIG+A   ++ DVL R LR    E   T
Sbjct: 12 VNDNPHIGHAYSSLIADVLTRALRLAGHEVRFT 44


>gi|71893995|ref|YP_279441.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
 gi|71852122|gb|AAZ44730.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
          Length = 790

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 15/90 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLN-LEGRKMSKSN 282
             D++ GG +    H                    E    I IH G L   +G+KMSKS 
Sbjct: 510 PVDLYIGGQEHAVGHLIYSRFWHKVLFDAGIVPNSEPFQKI-IHQGMLLGSDGQKMSKSK 568

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML 312
           GN I   E+++        + A  IR+ ++
Sbjct: 569 GNTINPTEIID-------KFGADTIRIFLM 591


>gi|332531435|ref|ZP_08407339.1| isoleucyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
 gi|332039104|gb|EGI75526.1| isoleucyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
          Length = 953

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 65/188 (34%), Gaps = 24/188 (12%)

Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
           W    G   PG+H E    +  YL    D H G          + +  +C          
Sbjct: 568 WHVLRGTHAPGFH-ETGPEADLYLEGH-DQHRGWFH-------SSLLLACAIYGRAPYKG 618

Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
           +  H   ++ +GRKMSKS GN I   E+        +   A +IRL +  + Y   I   
Sbjct: 619 LLTHGFTVDAQGRKMSKSLGNGIDPMEM-------SKKLGAEIIRLWVAASDYSGDIAGD 671

Query: 324 VQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
            + L        +   T      +    DPA  +   + L  +        LAR +    
Sbjct: 672 DKILARVVDGYRRIRNTLRFLLANISDFDPAKDAVPADQLLEIDRYA----LARAAELQA 727

Query: 380 DLLPIFNA 387
           ++L  FN 
Sbjct: 728 EILDHFNK 735


>gi|260589301|ref|ZP_05855214.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
 gi|260540382|gb|EEX20951.1| valine--tRNA ligase [Blautia hansenii DSM 20583]
          Length = 881

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 70/169 (41%), Gaps = 19/169 (11%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +             ++ IH    + +GRKMSKS GN I   E+
Sbjct: 481 DVLVTGYDIIFFWVIRMVFSGLEQTGKTPFHHVLIHGLVRDSQGRKMSKSLGNGIDPLEV 540

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +RL ++  +   P   + F  +R+  +    +K W  +      +
Sbjct: 541 ID-------KYGADALRLTLMTGN--APGNDMRFYWERIEASRNFANKVWNASRFIMMNL 591

Query: 348 DPAVLSALYNDLNTVSA-----IQALHKLARESTKNHDLLPIFNASAHI 391
           + A +     DL T++      +  ++ LA+E T+N D   +  A   +
Sbjct: 592 EKADIPK-NIDLQTLTGADKWILSKVNTLAKEVTENLDKYELGIAVQKV 639


>gi|19075438|ref|NP_587938.1| mitochondrial isoleucine-tRNA ligase (predicted)
           [Schizosaccharomyces pombe 972h-]
 gi|74625844|sp|Q9USL3|SYIM_SCHPO RecName: Full=Isoleucyl-tRNA synthetase, mitochondrial; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|5701963|emb|CAB52155.1| mitochondrial isoleucine-tRNA ligase (predicted)
           [Schizosaccharomyces pombe]
          Length = 973

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 2/85 (2%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYR 317
             + ++ H    +  G+K SKS GN     +++  K   G+   +   ++RL +      
Sbjct: 608 PFSTLFTHGFIFDERGQKQSKSLGNVTDPEDVINGKLLKGKKLPYGVDLLRLWVASCDST 667

Query: 318 EPIDFTVQRLTEAEILLSKWPQTST 342
              +     LT+    L KW  TS 
Sbjct: 668 NDTNLGPNILTQVGESLKKWRLTSR 692


>gi|56698255|ref|YP_168628.1| leucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
 gi|60390660|sp|Q5LMY0|SYL_SILPO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56679992|gb|AAV96658.1| leucyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
          Length = 852

 Score = 38.3 bits (88), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 34/126 (26%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      HIG+ R   + DV+ R          V +              A         
Sbjct: 41  PYPSGRIHIGHVRNYTMGDVIARY--KLSNGFNVLHPMGFDAFGMPAENAAMASGGH--- 95

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
                  T KN +  V     L       +  AT    +  Q   L  + +  G  Y  N
Sbjct: 96  ---PKDWTYKNIETMVAQMKPLGFGLDWSRMFATCDPEYYGQQQALFLDFLEKGLVYRKN 152

Query: 150 NEIIFD 155
             + +D
Sbjct: 153 AVVNWD 158


>gi|329727331|gb|EGG63787.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|294649485|ref|ZP_06726908.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
 gi|292824613|gb|EFF83393.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
          Length = 717

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    +      NGFL + G+KMSKS G FI     L 
Sbjct: 321 HFIGKDIVYFHALFWPAMLEGANYRTPSGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 377

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 378 ------QHLNPEYLRYYFAS 391


>gi|283770729|ref|ZP_06343621.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
 gi|283460876|gb|EFC07966.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|254671995|emb|CBA04475.1| Leucyl-tRNA synthetase [Neisseria meningitidis alpha275]
          Length = 837

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 594 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 646

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 647 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 704

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 705 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 733


>gi|253734551|ref|ZP_04868716.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
 gi|253727492|gb|EES96221.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TCH130]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|192359410|ref|YP_001983671.1| isoleucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
 gi|190685575|gb|ACE83253.1| isoleucyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
          Length = 935

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 34/91 (37%), Gaps = 7/91 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     +  H   ++ +G KMSKS GN I    ++       +   A V+RL +
Sbjct: 578 SMAIHGVAPYKQVLTHGFTIDAKGMKMSKSIGNAIDPQVVM-------KDLGADVLRLWV 630

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T +   +  + + L        +   T+ 
Sbjct: 631 AATDFSTEMSVSDEILKRTADSYRRIRNTAR 661


>gi|187607938|ref|NP_001120515.1| isoleucyl-tRNA synthetase 2, mitochondrial [Xenopus (Silurana)
           tropicalis]
 gi|170285160|gb|AAI61415.1| LOC100145647 protein [Xenopus (Silurana) tropicalis]
          Length = 992

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 2/91 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL--ETKKFGGRSWPAPVIRL 309
           S  A       NI +H   L+ +G KMSKS GN +  + ++     K    ++ A V+R 
Sbjct: 616 SVAARNKAPYRNIIVHGFTLSEKGEKMSKSVGNVVDPDVVINGGQDKVNEPAYGADVLRW 675

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +  ++    +      L  A   ++K   T
Sbjct: 676 WVAESNVFTEVLIGPAVLNSARDDINKLRNT 706


>gi|116492415|ref|YP_804150.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
 gi|122266121|sp|Q03GG4|SYL_PEDPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|116102565|gb|ABJ67708.1| leucyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
          Length = 805

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 48/137 (35%), Gaps = 31/137 (22%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  ++++E        + A  +RL  M M    E + ++   L  
Sbjct: 571 LGSNHEKMSKSKGNVVNPDDIVER-------FGADTLRLYEMFMGPLTESVAWSEDGLNG 623

Query: 330 AEILLSK-WPQTSTSKGIIDPAVLSALY---------------ND-----LNTVSAIQAL 368
           +   + + W      +  +   +++                  +D      NT  AI  +
Sbjct: 624 SRKWIDRVWRLMIDDENQLRDHIVTENDGSLDMIYNQTVKKVTDDYENMRFNT--AISQM 681

Query: 369 HKLARESTKNHDLLPIF 385
                E+ K   L  ++
Sbjct: 682 MVFVNEAYKADKLPAVY 698


>gi|74318800|ref|YP_316540.1| arginyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|109895051|sp|Q3SF80|SYR_THIDA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|74058295|gb|AAZ98735.1| arginyl-tRNA synthetase, class Ic [Thiobacillus denitrificans ATCC
           25259]
          Length = 557

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 47/306 (15%), Positives = 91/306 (29%), Gaps = 46/306 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R   + D L  L      +    +  N   +    +  + Q       
Sbjct: 130 PT--GPLHVGHGRQAALGDALCNLYAAQGWDVYREFYYNDAGVQIATLAASVQARARGLQ 187

Query: 93  NDAISIITSKNTQQFVKDTTRLA-----CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               +   +     ++ D  R         +   +  A+  +   +  I+   +    +E
Sbjct: 188 PGDATWPEAAYNGDYIADIARDFLAGKTVKSDDREFTASGDVDD-LDSIRQFAVAYLRHE 246

Query: 148 ANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADFILWKRSTPMEP---- 202
            + ++        NY   S    D       +      K    D  LW R+T        
Sbjct: 247 QDLDLRAFAVHFDNYYLESSLYTDGRVDATVQRLVAAGKTYEQDGALWLRTTEYGDDKDR 306

Query: 203 ---GWESPWGRGRP--GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA------Q 251
                +  +    P   +HI   A       +  +I G         H   IA      Q
Sbjct: 307 VMKKSDGTYTYFVPDVAYHI---AKWERGFARAINIQGTD-------HHGTIARVRAGLQ 356

Query: 252 SCCADRIEKTANIWIHNGFLNL----EGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           +      E   +  +H   + +    E  K+SK  G+++T+ +L+E             +
Sbjct: 357 AASVGIPEGYPDYLLHT-MVRVMRGGEEVKISKRAGSYVTLRDLIEWT-------SKDAV 408

Query: 308 RLAMLM 313
           R  +L 
Sbjct: 409 RFFLLS 414


>gi|88811892|ref|ZP_01127145.1| Leucyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
 gi|88790776|gb|EAR21890.1| Leucyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
          Length = 867

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 47/139 (33%), Gaps = 37/139 (26%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK 336
           MSKS  N +    L+E        + A  +RL +L      + ++++   +  A   L +
Sbjct: 627 MSKSKNNGVDPQALVER-------FGADTVRLFILFAAPPEQALEWSDSAVEGAYRFLKR 679

Query: 337 WPQ------TSTSKGIIDPAVL----SAL-----------YND------LNTVSAIQALH 369
                    T       +PA L     A+            +D       NT  AI A+ 
Sbjct: 680 LWNLVLAHVTDGPARAPEPAQLTPPQQAMRRKIHETIQKASDDVGRRFTFNT--AIAAVM 737

Query: 370 KLARESTKNHDLLPIFNAS 388
           +LA   ++  D      A 
Sbjct: 738 ELANALSRFDDSSDQGRAV 756


>gi|15927242|ref|NP_374775.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus N315]
 gi|21283336|ref|NP_646424.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
 gi|49486490|ref|YP_043711.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57650536|ref|YP_186549.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87160762|ref|YP_494306.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195468|ref|YP_500272.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|148268144|ref|YP_001247087.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|150394211|ref|YP_001316886.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|151221770|ref|YP_001332592.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509882|ref|YP_001575541.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142585|ref|ZP_03567078.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253317192|ref|ZP_04840405.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253732314|ref|ZP_04866479.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257794050|ref|ZP_05643029.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|258415754|ref|ZP_05682025.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|258422009|ref|ZP_05684929.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|258438233|ref|ZP_05689517.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|258443691|ref|ZP_05692030.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|258444929|ref|ZP_05693249.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|258447983|ref|ZP_05696115.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|258451821|ref|ZP_05699843.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|258454309|ref|ZP_05702278.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|262052238|ref|ZP_06024443.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|269203281|ref|YP_003282550.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|282893160|ref|ZP_06301394.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|282920205|ref|ZP_06327930.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282929338|ref|ZP_06336905.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|284024713|ref|ZP_06379111.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
 gi|294848686|ref|ZP_06789432.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|295405975|ref|ZP_06815783.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296274908|ref|ZP_06857415.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
 gi|297207622|ref|ZP_06924057.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245099|ref|ZP_06928976.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300911704|ref|ZP_07129148.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380744|ref|ZP_07363413.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|81649185|sp|Q6G8R2|SYV_STAAS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81704362|sp|Q7A0P4|SYV_STAAW RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81781461|sp|Q99TJ8|SYV_STAAN RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|81859571|sp|Q5HFA8|SYV_STAAC RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|122539344|sp|Q2FXR8|SYV_STAA8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|123485492|sp|Q2FG72|SYV_STAA3 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|172048932|sp|A6QHJ8|SYV_STAAE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083635|sp|A6U2D1|SYV_STAA2 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083636|sp|A5ITI8|SYV_STAA9 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083637|sp|A8Z2I4|SYV_STAAT RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|13701460|dbj|BAB42754.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus N315]
 gi|21204776|dbj|BAB95472.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus MW2]
 gi|49244933|emb|CAG43394.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MSSA476]
 gi|57284722|gb|AAW36816.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
 gi|87126736|gb|ABD21250.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203026|gb|ABD30836.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|147741213|gb|ABQ49511.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
 gi|149946663|gb|ABR52599.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
 gi|150374570|dbj|BAF67830.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368691|gb|ABX29662.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253723952|gb|EES92681.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|257788022|gb|EEV26362.1| valyl-tRNA synthetase [Staphylococcus aureus A9781]
 gi|257839347|gb|EEV63820.1| valyl-tRNA synthetase [Staphylococcus aureus A9763]
 gi|257842053|gb|EEV66482.1| valyl-tRNA synthetase [Staphylococcus aureus A9719]
 gi|257848277|gb|EEV72268.1| valyl-tRNA synthetase [Staphylococcus aureus A9299]
 gi|257851097|gb|EEV75040.1| valyl-tRNA synthetase [Staphylococcus aureus A8115]
 gi|257856137|gb|EEV79052.1| valyl-tRNA synthetase [Staphylococcus aureus A6300]
 gi|257858744|gb|EEV81615.1| valyl-tRNA synthetase [Staphylococcus aureus A6224]
 gi|257860533|gb|EEV83359.1| valyl-tRNA synthetase [Staphylococcus aureus A5948]
 gi|257863539|gb|EEV86298.1| valyl-tRNA synthetase [Staphylococcus aureus A5937]
 gi|259159839|gb|EEW44878.1| valyl-tRNA synthetase [Staphylococcus aureus 930918-3]
 gi|262075571|gb|ACY11544.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED98]
 gi|269941145|emb|CBI49532.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus TW20]
 gi|282589070|gb|EFB94171.1| valyl-tRNA synthetase [Staphylococcus aureus A10102]
 gi|282594553|gb|EFB99538.1| valyl-tRNA synthetase [Staphylococcus aureus A9765]
 gi|282764478|gb|EFC04604.1| valyl-tRNA synthetase [Staphylococcus aureus A8117]
 gi|285817346|gb|ADC37833.1| Valyl-tRNA synthetase [Staphylococcus aureus 04-02981]
 gi|294824712|gb|EFG41135.1| valyl-tRNA synthetase [Staphylococcus aureus A9754]
 gi|294968972|gb|EFG44993.1| valyl-tRNA synthetase [Staphylococcus aureus A8819]
 gi|296887639|gb|EFH26537.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297178179|gb|EFH37427.1| valyl-tRNA synthetase [Staphylococcus aureus A8796]
 gi|300887125|gb|EFK82326.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302751490|gb|ADL65667.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
           JKD6008]
 gi|304340743|gb|EFM06674.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830042|emb|CBX34884.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130705|gb|EFT86691.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315198642|gb|EFU28970.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320140457|gb|EFW32311.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320143996|gb|EFW35765.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MRSA177]
 gi|329314337|gb|AEB88750.1| Valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus T0131]
 gi|329728349|gb|EGG64786.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|332213632|ref|XP_003255929.1| PREDICTED: ADP-ribosylation factor-like protein 4A-like [Nomascus
           leucogenys]
          Length = 200

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 8/105 (7%)

Query: 320 IDFTV-QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
           +DF   +R+ EA+I L K  + S ++G+  P ++ A   DL     +  + KL      +
Sbjct: 100 VDFVDIERMEEAKIELHKITRISENQGV--PVLIVANKQDLRNSLCLSEIEKLLAMGELS 157

Query: 379 HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
                    +  ILG     + L + +    + +++ R +L + K
Sbjct: 158 SSTPWHLQPTCAILG-----DGLKEGLEKLHDMIIKRRKMLRQQK 197


>gi|302870971|ref|YP_003839607.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
 gi|302573830|gb|ADL41621.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
          Length = 653

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/198 (16%), Positives = 55/198 (27%), Gaps = 55/198 (27%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H     A                 +G+L LEG KMSKS GN +     
Sbjct: 255 DVHLVGKEIVRFHTIIWPAMLMAL--GLPLPKTVFGHGWLLLEGGKMSKSKGNVV----- 307

Query: 292 LETKKFGGRSWPAPVIRLAML------MTHYREPIDFTVQRLTE---------------- 329
                   + +    +R  +L         Y     F+   L                  
Sbjct: 308 --DPVILAQKYGVDSLRYFLLREIPFGADGY-----FSEDALKNRHNSDLANDLGNLLSR 360

Query: 330 AEILLSKWPQT-----------STSKGIIDPAVLS---ALYNDLNTVSAIQALHKLARES 375
              ++ K+                    +   V      L ++    +A+  + KL   +
Sbjct: 361 TVAMIEKYFDGVIYHPEEEEEIDNELKRLAKEVYENVCKLLDEFQFSNALIEIWKLISRA 420

Query: 376 TKNHDLLPIFNASAHILG 393
            K  D          +LG
Sbjct: 421 NKYID-----QTMPWVLG 433


>gi|282916924|ref|ZP_06324682.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
 gi|282319411|gb|EFB49763.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus D139]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|269215567|ref|ZP_06159421.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269131054|gb|EEZ62129.1| isoleucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 952

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 7/70 (10%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
           ++  G KMSKS GN I   E+ +T       + A V+RL +  T Y   +      L   
Sbjct: 611 VDEHGEKMSKSKGNGIDPKEVTDT-------YGADVLRLWVSSTDYSVDVSIGDTILKRT 663

Query: 331 EILLSKWPQT 340
                ++  T
Sbjct: 664 SDAYRRFRNT 673


>gi|224008408|ref|XP_002293163.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
 gi|220971289|gb|EED89624.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
          Length = 554

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 15/102 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITI 288
           D+H  G D+++ H         C               +GF+N  EG+KMSKS GN +  
Sbjct: 270 DVHIIGKDILWFH----TVIWPCILMSAGIPLPKTVFAHGFVNDKEGKKMSKSVGNVVDP 325

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE 329
           +++L+        +     R  +     Y   + F+   + +
Sbjct: 326 HDMLD-------KFDVDSFRWYLCKEAPYGGELSFSEDNMRD 360


>gi|149915697|ref|ZP_01904223.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810589|gb|EDM70432.1| leucyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 860

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 32/126 (25%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R          V +              A         
Sbjct: 48  PYPSGRIHMGHVRNYTMGDVIARY--KLSTGHNVLHPMGWDAFGMPAENAAMAIGGH--- 102

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
                  T  N          L       +  AT    +  Q   L  +++  G  Y  N
Sbjct: 103 ---PKDWTYSNIADMRSQMKPLGLSIDWSREFATCDPEYYGQQQALFLDMLEKGLVYRKN 159

Query: 150 NEIIFD 155
             + +D
Sbjct: 160 AVVNWD 165


>gi|145222520|ref|YP_001133198.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315442968|ref|YP_004075847.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
 gi|145215006|gb|ABP44410.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
 gi|315261271|gb|ADT98012.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
          Length = 514

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 65/176 (36%), Gaps = 26/176 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G D+I  H     A    A  IE    ++ H GFL   G KMSKS GN +  N+L
Sbjct: 258 DLHMIGKDIIRFHAVYWPAFLMSA-GIELPKKVFAH-GFLFNRGEKMSKSVGNVVDPNDL 315

Query: 292 LETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTE-------------AEILLSKW 337
           +ET       +    +R  +L    + +   ++   +               A+  LS  
Sbjct: 316 VET-------FGVDQLRYFLLREVSFGQDGSYSEDGIIARINADLANEFGNLAQRSLS-M 367

Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
              +    + +P   +A   D   ++A   L    RE      +     A   +LG
Sbjct: 368 VAKNLDGAVPEPGEFTA--EDTAMLAAADDLLDRVREHYDATAMHLALEAIWSVLG 421



 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 39/125 (31%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+A   I  D + R  R    +     VR +T  D   ++ A        +  
Sbjct: 14  PNGDPHVGHAYEYIATDAIARFKRLDGFD-----VRFLTGTDVHGLKMAETAA---RLGV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
             + +   N+  F +   +L   +     R +  +H      +   ++  G  Y      
Sbjct: 66  PTAELARSNSDVFQRLQEKLNV-SFDRFIRTSDADHYEASKAIWTRMVDAGDVYLDKYSG 124

Query: 153 IFDTS 157
            +   
Sbjct: 125 WYSVR 129


>gi|329733231|gb|EGG69568.1| valine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|313625533|gb|EFR95248.1| methionyl-tRNA synthetase [Listeria innocua FSL J1-023]
          Length = 655

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +  + F +   +L     T   R T   H   +  + + ++  G  Y    E  +  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSV 132

Query: 157 S 157
           S
Sbjct: 133 S 133


>gi|302333330|gb|ADL23523.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JKD6159]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|298694934|gb|ADI98156.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus ED133]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|254450196|ref|ZP_05063633.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
 gi|198264602|gb|EDY88872.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 238]
          Length = 851

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 26/105 (24%), Gaps = 11/105 (10%)

Query: 14  KITEFQA-IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           K   F+        + YV    P      HIG+ R   + DV+ R          V +  
Sbjct: 19  KAETFKTTRSDDKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARY--KLATGHNVLHPM 76

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                       A      +         T +N    V     L 
Sbjct: 77  GFDAFGMPAENAA------MQTGIHPKDYTYQNIDDMVAQMKPLG 115


>gi|116871573|ref|YP_848354.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116740451|emb|CAK19571.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
           SLCC5334]
          Length = 665

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 50/149 (33%), Gaps = 19/149 (12%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
              +  + F +   +L     T   R T    +    ++ I     A     +I      
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQ--DRHKTSVEKIFEQLLA---QGDIYL---- 123

Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
              Y  +     +E    T++ E Y  +N
Sbjct: 124 -GEYEGWYSVSDEEYFTETQLEEVYKDEN 151


>gi|85680332|gb|ABC72361.1| valyl-tRNA synthetase [Haloquadratum walsbyi]
          Length = 932

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 5/89 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-----QEH 87
           PTV    H G+     + D + R  R    +    +  +   I  + +         QE+
Sbjct: 83  PTVSGNLHWGHVYGFTLQDFVARFRRMRGSDVFFPFGYDDNGIASERLAEDELNVRHQEY 142

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLAC 116
                      +  +   +F +   +L  
Sbjct: 143 ERREFQQMTQEVCQQYEAEFTEKMQQLGI 171



 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   ++ I+   L+    KMSKS GN I  +E++         +P    R     +
Sbjct: 562 HTGEVPFDSVMINGMVLDENREKMSKSKGNVIAPDEVIT-------EYPVDAARYWAAGS 614

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
              + + ++ + +   E LL K    S     +
Sbjct: 615 AVGDDLPYSEKGIRAGEKLLRKLWNASKLVEDL 647


>gi|15924653|ref|NP_372187.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156979981|ref|YP_001442240.1| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
 gi|255006449|ref|ZP_05145050.2| valyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|81774901|sp|Q931Q1|SYV_STAAM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|166225533|sp|A7X383|SYV_STAA1 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|14247435|dbj|BAB57825.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu50]
 gi|156722116|dbj|BAF78533.1| valine-tRNA ligase [Staphylococcus aureus subsp. aureus Mu3]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|325206804|gb|ADZ02257.1| leucyl-tRNA synthetase [Neisseria meningitidis M04-240196]
          Length = 878

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 774


>gi|325135488|gb|EGC58106.1| leucyl-tRNA synthetase [Neisseria meningitidis M0579]
 gi|325143787|gb|EGC66104.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240013]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772


>gi|297520080|ref|ZP_06938466.1| methionyl-tRNA synthetase [Escherichia coli OP50]
          Length = 390

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 19/186 (10%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    ++  + T N+++H G++ + G KMSKS G FI  +  L 
Sbjct: 5   HFIGKDIVYFHSLFWPAMLEGSNFRKPT-NLFVH-GYVTVNGAKMSKSRGTFIKASTWLN 62

Query: 294 TKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ-TSTSKGI 346
                   + A  +R      L +  R + ID  ++   +      ++K     S + G 
Sbjct: 63  -------HFDADSLRYYYTAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNLASRNAGF 113

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNI 405
           I+      L N+L      +     A    +  +      A   I+ + ++   ++++  
Sbjct: 114 INKRFDGVLANELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALADLANRYVDEQA 173

Query: 406 SIAIEK 411
              + K
Sbjct: 174 PWVVAK 179


>gi|270693073|ref|ZP_06222954.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316008|gb|EFA28051.1| arginine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 237

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 42/119 (35%), Gaps = 16/119 (13%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK------IIERARQE 86
           P V    H+G+ R  I+ D + R L +      V    ++ D   +       +E+ + E
Sbjct: 47  PNVAKEMHVGHLRSTIIGDAVVRTLEFLG--HNVIRANHVGDWGTQFGMLIAYLEKMQNE 104

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
           H S      +     +  + + +D             +A N+I ++   +   +    A
Sbjct: 105 HASEMELQDLEAFYREAKKHYDEDE--------IFAEKARNYIEELAENVYRQLDPDVA 155


>gi|269958424|ref|YP_003328211.1| valyl-tRNA synthetase [Anaplasma centrale str. Israel]
 gi|269848253|gb|ACZ48897.1| valyl-tRNA synthetase [Anaplasma centrale str. Israel]
          Length = 814

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 9/91 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PTV    H+G+       D + R  R     K V Y     D       + +KI +    
Sbjct: 44  PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGFDDNGLPTERLVEKIKKLRAV 101

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +            ++ +   +F     RL  
Sbjct: 102 QLERAEFTKMCREVSHEFRTKFRNLFRRLGI 132


>gi|260429574|ref|ZP_05783551.1| RegB [Citreicella sp. SE45]
 gi|260420197|gb|EEX13450.1| RegB [Citreicella sp. SE45]
          Length = 468

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 37/93 (39%), Gaps = 17/93 (18%)

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG-----IEVCKEHLNKNIS 406
           ++A+ +      A+ A       + K +DL  +  A+AH LG     I++    L  ++ 
Sbjct: 195 MNAMSD------ALTATQMALSRAQKLNDLGGVVAAAAHELGTPLATIKLTSAELIDDLE 248

Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
              +     RLI    +    AD  R  L S G
Sbjct: 249 DHPDLQEDARLI----RD--QADRCRDILRSMG 275


>gi|323340625|ref|ZP_08080877.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091748|gb|EFZ34368.1| isoleucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 930

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 73/188 (38%), Gaps = 16/188 (8%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             YL    D++  G D       + +  S           I      L+ +GRKMSKS G
Sbjct: 544 RDYLTYPADMYLEGSDQYRGWFNSSLITSVAVSGHAPYKQIISQGFTLDGKGRKMSKSLG 603

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--- 340
           N I  +E+++          A +IRL +L       +  ++   ++      K+  T   
Sbjct: 604 NTIVPSEVVDKMG-------AEIIRLWVLSVDTSADVRVSMDSFSQISESYRKFRNTMRF 656

Query: 341 -STSKGIIDPAVLSALYNDLNTV-SAIQAL-HKLARESTK---NHDLLPIFNASAHILGI 394
              +    DPA  +  Y+DL      ++ L +K  +E      N++ + I+    + L  
Sbjct: 657 MLANTTDFDPAENTVAYDDLEACDKYMEVLANKFTKEILDDYANYNFMDIYKKLINFLTT 716

Query: 395 EVCKEHLN 402
           E+   +L+
Sbjct: 717 ELSAFYLD 724


>gi|254525827|ref|ZP_05137879.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
 gi|221537251|gb|EEE39704.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
          Length = 856

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 26/83 (31%), Gaps = 8/83 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R  ++ D++ R  R+    K V +              A      I  
Sbjct: 53  PYPSGNLHMGHVRNYVITDLIARFQRFKG--KSVLHPMGWDAFGLPAENAA------IER 104

Query: 93  NDAISIITSKNTQQFVKDTTRLA 115
             + S+ T KN          L 
Sbjct: 105 GISPSVWTKKNISHMRSQLKLLG 127


>gi|218186278|gb|EEC68705.1| hypothetical protein OsI_37185 [Oryza sativa Indica Group]
          Length = 368

 Score = 37.9 bits (87), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               + N+ + + +LV  R    K + + SAD +   L+  G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235


>gi|323440792|gb|EGA98501.1| valyl-tRNA synthetase [Staphylococcus aureus O11]
 gi|323442947|gb|EGB00570.1| valyl-tRNA synthetase [Staphylococcus aureus O46]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|289705662|ref|ZP_06502047.1| valine--tRNA ligase [Micrococcus luteus SK58]
 gi|289557610|gb|EFD50916.1| valine--tRNA ligase [Micrococcus luteus SK58]
          Length = 890

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 34/191 (17%), Positives = 71/191 (37%), Gaps = 12/191 (6%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G D+I     + + ++   +      +  +    L+ + +KMSKS GN +   
Sbjct: 557 PFDLRPQGHDIIRTWLFSTVVRADALNGSVPWTDTALSGWILDPDRKKMSKSKGNVVVPT 616

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGI 346
           ++LE        + +  +R             + V ++     L  K    +    + G 
Sbjct: 617 DILE-------EFGSDAVRYWASSARLGADTAYEVAQMKIGRRLAIKLLNAAKFVLNLGA 669

Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
              AV+    +     +A+ A   LAR +T        F+A  +   + V +    +   
Sbjct: 670 TRDAVVRTPEDAARVTNALDASL-LARLATTVEQATAAFDAYDYARALNVTESFFWQFTD 728

Query: 407 IAIEKLVQERL 417
             +E L+++R 
Sbjct: 729 DYVE-LIKDRA 738


>gi|261393229|emb|CAX50850.1| leucyl-tRNA synthetase (leucine--tRNA ligase; LeuRS) [Neisseria
           meningitidis 8013]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772


>gi|87201271|ref|YP_498528.1| isoleucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
 gi|87136952|gb|ABD27694.1| Isoleucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
           12444]
          Length = 968

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 58/159 (36%), Gaps = 43/159 (27%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          I  H   ++ +G KMSKS GN I+  +L+       R + A ++RL  
Sbjct: 637 SCGTRGRAPYDAILTHGFTMDAKGMKMSKSLGNTISPIDLM-------RDYGADILRLWA 689

Query: 312 LMT------------------HYREPID-----------FTV-QRLTEAEI-LLSKWPQT 340
           L                     YR+  +           FT  +RL  AE+  L ++   
Sbjct: 690 LSVDFTEDHRIGKEILQGVADQYRKLRNTYRYLLGALDGFTEAERLPVAEMPELEQYM-- 747

Query: 341 STSKGIIDPAVLSALYN-DLNTVSAIQALHKLARESTKN 378
               G +D  +  A+ + D NT   ++AL     E    
Sbjct: 748 LGLLGKLDATLRQAVDDFDYNT--YVRALTDFCNEDLSA 784


>gi|91793410|ref|YP_563061.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|123356753|sp|Q12MI8|SYM_SHEDO RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|91715412|gb|ABE55338.1| methionyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 689

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   + T+ ++ H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGAGLRKPTS-VYAH-GYVTVNGAKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 349 -------HLDPEYLRYY 358


>gi|72080974|ref|YP_288032.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
 gi|71914098|gb|AAZ54009.1| leucyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
          Length = 790

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/90 (25%), Positives = 35/90 (38%), Gaps = 15/90 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLN-LEGRKMSKSN 282
             D++ GG +    H                    E    I IH G L   +G+KMSKS 
Sbjct: 510 PVDLYIGGQEHAVGHLIYSRFWHKVLFDAGIVPNSEPFQKI-IHQGMLLGSDGQKMSKSK 568

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAML 312
           GN I   E+++        + A  IR+ ++
Sbjct: 569 GNTINPTEMID-------KFGADTIRIFLM 591


>gi|82751253|ref|YP_416994.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
 gi|123547885|sp|Q2YTA0|SYV_STAAB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|82656784|emb|CAI81213.1| valyl-tRNA synthetase [Staphylococcus aureus RF122]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++      ++K    + 
Sbjct: 537 -----EYGADSLRYFLATGS--SPGHDLRYSTEKVESVWNFINKIWNGAR 579


>gi|15677729|ref|NP_274892.1| leucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|14285777|sp|Q9JXT2|SYL_NEIMB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|7227154|gb|AAF42228.1| leucyl-tRNA synthetase [Neisseria meningitidis MC58]
 gi|316985512|gb|EFV64459.1| leucyl-tRNA synthetase [Neisseria meningitidis H44/76]
 gi|325139552|gb|EGC62092.1| leucyl-tRNA synthetase [Neisseria meningitidis CU385]
 gi|325200950|gb|ADY96405.1| leucyl-tRNA synthetase [Neisseria meningitidis H44/76]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772


>gi|27904876|ref|NP_778002.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|29427406|sp|P59433|SYL_BUCBP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|27904274|gb|AAO27107.1| leucyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 861

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           +K   F    + +  + Y      Y     H+G+ R   + DV+ R  R     K V + 
Sbjct: 19  KKKNTFKVTENSNKEKFYCLAMIPYPSGKLHMGHVRNYTISDVIARYQRMLG--KNVLHP 76

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                        A      I  N   +  T +N +   +    L 
Sbjct: 77  MGWDAFGLPAENAA------IKNNTHPAQWTYENIKYMKQQLISLG 116


>gi|85091295|ref|XP_958832.1| glutamyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28920219|gb|EAA29596.1| glutamyl-tRNA synthetase [Neurospora crassa OR74A]
 gi|28950388|emb|CAD71230.1| probable glutamate--tRNA ligase [Neurospora crassa]
          Length = 636

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 39/119 (32%), Gaps = 26/119 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  ++ D       +   +  +        +DD    + +QE      
Sbjct: 127 PEPSGYLHIGHAKAALLSD----YFAHQAYKGQLRL-----RLDDTNPSKEKQE------ 171

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
                          ++D   +    P      +++   +  +   +I  GHAY  + +
Sbjct: 172 ----------YQDAIIEDLALMGIK-PDTVTYTSDYFDYLYDMCVRMIKEGHAYADDTD 219


>gi|254477744|ref|ZP_05091130.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
 gi|214031987|gb|EEB72822.1| leucyl-tRNA synthetase [Ruegeria sp. R11]
          Length = 853

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 32/126 (25%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R          V +              A         
Sbjct: 41  PYPSGRIHMGHVRNYTMGDVVARY--KLSTGHNVLHPMGWDAFGMPAENAAMASGGH--- 95

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
                  T KN          L       +  AT    +  Q   L  + +  G  Y  N
Sbjct: 96  ---PKDWTYKNIADMRGQMKPLGLSIDWSREFATCDPEYYGQQQALFLDFLEKGLVYRKN 152

Query: 150 NEIIFD 155
             + +D
Sbjct: 153 AVVNWD 158


>gi|162456166|ref|YP_001618533.1| methionyl-tRNA synthetase [Sorangium cellulosum 'So ce 56']
 gi|187645700|sp|A9FBU8|SYM1_SORC5 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|161166748|emb|CAN98053.1| metG2 [Sorangium cellulosum 'So ce 56']
          Length = 690

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 19/96 (19%)

Query: 228 GKVFD----------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
           G+ FD          +H  G D+++ H     A    A      + + +H GFL + G K
Sbjct: 271 GEAFDDWWRSEETEIVHVIGKDIVYFHTLFWPAMLKSARFSLP-SRVQVH-GFLTVNGEK 328

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           MSKS G F+  +  L       +      +R     
Sbjct: 329 MSKSKGTFVLASTYL-------KHLDPAYLRYYYAS 357


>gi|325201468|gb|ADY96922.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240149]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772


>gi|308389992|gb|ADO32312.1| putative leucyl-tRNA synthetase [Neisseria meningitidis alpha710]
          Length = 878

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 774


>gi|288561373|ref|YP_003424859.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
 gi|288544083|gb|ADC47967.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
          Length = 573

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 11/37 (29%), Positives = 14/37 (37%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
                HIG+ R  ++ D L RLL          Y  N
Sbjct: 124 PNGPLHIGHIRNSVIGDSLRRLLTKAGYNVDTQYYVN 160


>gi|260495228|ref|ZP_05815356.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
 gi|260197285|gb|EEW94804.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
          Length = 859

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSKWPQTSTSKGII----------------DPA-----------VLSALYND--LN 360
           A   L++  +       I                D A           V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSEIVKKSNDKIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVASSMNSEQAAKILG 748


>gi|288931973|ref|YP_003436033.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
 gi|288894221|gb|ADC65758.1| isoleucyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
          Length = 1023

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        + +H   L+ +GRKMSKS GN +   E+++              RL +
Sbjct: 562 SIIAFGKAPYKTVLMHGFTLDEQGRKMSKSLGNVVEPEEVIDRIGV-------DAFRLYV 614

Query: 312 LMTHYREPIDFTVQRLTEAEILLS 335
           L +   E + F+     EAE  L 
Sbjct: 615 LSSALWEDLKFSWG---EAENFLR 635


>gi|256846013|ref|ZP_05551471.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
 gi|256719572|gb|EEU33127.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
          Length = 859

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 52/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WPQTSTSKGIIDPA--------------------------VLSALYND--LN 360
           A   L++ W     +  +I  +                          V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSELIKKSNDKIDYNKLSKEDKTLLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVSSSMNSEQAAKILG 748


>gi|255003539|ref|ZP_05278503.1| valyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
          Length = 814

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 9/91 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PTV    H+G+       D + R  R     K V Y     D       + +KI +    
Sbjct: 44  PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGFDDNGLPTERLVEKIKKLRAV 101

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +            ++ +   +F     RL  
Sbjct: 102 QLERAEFTKMCREVSHEFRTKFRNLFRRLGI 132


>gi|254995351|ref|ZP_05277541.1| valyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
 gi|255004664|ref|ZP_05279465.1| valyl-tRNA synthetase [Anaplasma marginale str. Virginia]
          Length = 815

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 9/91 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PTV    H+G+       D + R  R     K V Y     D       + +KI +    
Sbjct: 44  PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGFDDNGLPTERLVEKIKKLRAV 101

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +            ++ +   +F     RL  
Sbjct: 102 QLERAEFTKMCREVSHEFRTKFRNLFRRLGI 132


>gi|237743871|ref|ZP_04574352.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
 gi|229432902|gb|EEO43114.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
          Length = 859

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSKWPQTSTSKGII----------------DPA-----------VLSALYND--LN 360
           A   L++  +       I                D A           V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSEIVKKSNDKIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVASSMNSEQAAKILG 748


>gi|254171817|ref|ZP_04878493.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
 gi|214033713|gb|EEB74539.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
          Length = 640

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  ++ D + R++R    +     V+N   IDD  ++ A+     + + +   
Sbjct: 136 PLHMGHARNAVLGDTMARIMRRLGYKVE---VQNY--IDDLGVQFAQVLWGYLNMKEEFE 190

Query: 98  II-TSKNTQQFVKDT 111
            I      +   +D 
Sbjct: 191 RIEAELREKGLKEDF 205


>gi|188584685|ref|YP_001916230.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349372|gb|ACB83642.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 655

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 50/151 (33%), Gaps = 48/151 (31%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
             +G+L LE  KMSKS GN +    L+         + +  IR  +L       I F   
Sbjct: 289 FGHGWLLLEEGKMSKSKGNVVDPEVLVN-------KYGSDAIRYYLLR-----EISFGSD 336

Query: 326 RLTEAEILLSKW-PQTSTSKG-----------------IIDPAVLSALYNDL-------- 359
            +   E L+ +     +   G                 I +P V   + NDL        
Sbjct: 337 GVFTLEALIRRINYDLANDLGNLLNRTVAMIDKYFDGQIPEPVVSEQVDNDLINHAQETV 396

Query: 360 ----------NTVSAIQALHKLARESTKNHD 380
                     +   A++AL +L   + K  D
Sbjct: 397 TETEKHMEGMDFSEALKALWELIGRTNKYID 427


>gi|149918382|ref|ZP_01906873.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149820908|gb|EDM80317.1| methionyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 600

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 9/79 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+++ H     A    +      + +  H G+L + G KMSKS G FI  N  L
Sbjct: 296 VHVIGKDIVYFHCLFWPAMLNASGYTVP-SRVHAH-GWLKVNGEKMSKSRGTFILANTYL 353

Query: 293 ETKKFGGRSWPAPVIRLAM 311
           E             +R  +
Sbjct: 354 E-------HVDPAYLRYYL 365


>gi|83644722|ref|YP_433157.1| methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
 gi|123739980|sp|Q2SKU2|SYM_HAHCH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|83632765|gb|ABC28732.1| Methionyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
          Length = 681

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     +   CAD    +A ++ H GF+ ++G KMSKS G FI     LE
Sbjct: 291 HFIGKDIINFHALFWPSMLSCADFRTPSA-VYAH-GFVTVDGAKMSKSRGTFIMARTYLE 348

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 349 -------HLNPEYLRYYF 359


>gi|56417183|ref|YP_154257.1| valyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
 gi|81821248|sp|Q5P9M8|SYV_ANAMM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|56388415|gb|AAV87002.1| valyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
          Length = 823

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 9/91 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PTV    H+G+       D + R  R     K V Y     D       + +KI +    
Sbjct: 52  PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGFDDNGLPTERLVEKIKKLRAV 109

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +            ++ +   +F     RL  
Sbjct: 110 QLERAEFTKMCREVSHEFRTKFRNLFRRLGI 140


>gi|325204849|gb|ADZ00303.1| leucyl-tRNA synthetase [Neisseria meningitidis M01-240355]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772



 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKHNVAPAAWTYDNIEYMKTQLKSLGF--AIDWE 122

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 123 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159


>gi|325127472|gb|EGC50401.1| leucyl-tRNA synthetase [Neisseria meningitidis N1568]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772



 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKHNVAPAAWTYDNIEYMKTQLKSLGF--AIDWE 122

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 123 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159


>gi|121634194|ref|YP_974439.1| leucyl-tRNA synthetase [Neisseria meningitidis FAM18]
 gi|166231622|sp|A1KS07|SYL_NEIMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120865900|emb|CAM09636.1| putative leucyl-tRNA synthetase [Neisseria meningitidis FAM18]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772


>gi|110667028|ref|YP_656839.1| valyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
 gi|109624775|emb|CAJ51181.1| valine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
          Length = 930

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/89 (14%), Positives = 27/89 (30%), Gaps = 5/89 (5%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-----QEH 87
           PTV    H G+     + D + R  R    +    +  +   I  + +         QE+
Sbjct: 81  PTVSGNLHWGHVYGFTLQDFVARFKRMRGSDVFFPFGYDDNGIASERLAEDELNVRHQEY 140

Query: 88  PSIPINDAISIITSKNTQQFVKDTTRLAC 116
                      +  +   +F +   +L  
Sbjct: 141 ERREFQQMTQEVCQQYEAEFTEKMQQLGI 169



 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   ++ I+   L+    KMSKS GN I  +E++         +P    R     +
Sbjct: 560 HTGEVPFDSVMINGMVLDENREKMSKSKGNVIAPDEVIT-------EYPVDAARYWAAGS 612

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
              + + ++ + +   E LL K    S     +
Sbjct: 613 AVGDDLPYSEKGIRAGEKLLRKLWNASKLVEDL 645


>gi|73663421|ref|YP_302202.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|109895041|sp|Q49VF3|SYR_STAS1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|72495936|dbj|BAE19257.1| arginyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 555

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 21/52 (40%), Gaps = 4/52 (7%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
           PT     HIG+AR   V D L  +L          Y  N  D  ++I   AR
Sbjct: 134 PT--GDLHIGHARNAAVGDTLANILTAAGYHVTREYYVN--DAGNQITNLAR 181


>gi|58584620|ref|YP_198193.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|81311646|sp|Q5GSS3|SYI_WOLTR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|58418936|gb|AAW70951.1| Isoleucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 1134

 Score = 37.9 bits (87), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      E   N   H   L+++G+K+SK   N+    E+ +        + +  +R  M
Sbjct: 631 STALFDSEPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFD-------KYGSDALRFLM 683

Query: 312 LMT 314
           L  
Sbjct: 684 LSG 686


>gi|298675785|ref|YP_003727535.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
 gi|298288773|gb|ADI74739.1| isoleucyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
          Length = 1065

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 19/114 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       ++ +H   L+  G+KMSKS GN +   E+++        + A  +R  +
Sbjct: 571 SMVAFEQSPYKSVMMHGFTLDKYGKKMSKSQGNVVDPLEVVD-------KYGADTLRAYV 623

Query: 312 LMTHYREPID---FTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALY 356
           L T    P D   F  + + +    L+      ++P         DP  +S + 
Sbjct: 624 LSTS--APWDDLKFNWEGVNQVYSNLNILWNVYRFPIPYMVLDNFDPKQVS-MD 674


>gi|295396171|ref|ZP_06806353.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
 gi|294970959|gb|EFG46852.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
          Length = 527

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 36/130 (27%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                HIG+A   I  D + R  R    +     V  +T  D+  ++    +  +     
Sbjct: 12  PNGAPHIGHAYEYIASDTIARFKRLTGED-----VFMLTGTDEHGLK---MQQSAQKAGI 63

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
               +  KN   F      L         R T  +H      L + +   G  Y      
Sbjct: 64  TPRELADKNAAGFRALHDALGSSY-DRFIRTTDPDHYTASQDLWKKMDEAGDIYLDTYAG 122

Query: 153 IFDTSSIPNY 162
            +       Y
Sbjct: 123 WYSVRDEAYY 132


>gi|260102231|ref|ZP_05752468.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|260083972|gb|EEW68092.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
 gi|328463921|gb|EGF35439.1| methionyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
          Length = 658

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 11/119 (9%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNA   I  D + R  R    +   T+    TD         + E  +           
Sbjct: 22  IGNAYTTIAADTMARYKRSQGYD---TFFLTGTD-----EHGLKIEQKAEAQGIKPQEFV 73

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            K    + K    L         R T   H+  +  + + ++  G  Y       +   
Sbjct: 74  DKMAASYKKLWKSLDISY-DKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSVE 131


>gi|256824764|ref|YP_003148724.1| valyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
 gi|256688157|gb|ACV05959.1| valyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
          Length = 885

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 30/78 (38%), Gaps = 18/78 (23%)

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHE                N  ++   L+ + +KMSKS GN +T  +LLE          
Sbjct: 573 HHE---------HGTVPWWNATLNGWILDPDRKKMSKSKGNVVTPVDLLEEHG------- 616

Query: 304 APVIRLAMLMTHYREPID 321
           +  +R        R+ +D
Sbjct: 617 SDAVRYWAASA--RQGVD 632


>gi|289582941|ref|YP_003481407.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
 gi|289532494|gb|ADD06845.1| leucyl-tRNA synthetase [Natrialba magadii ATCC 43099]
          Length = 971

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 25/89 (28%), Gaps = 10/89 (11%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           YV G   Y     H+G+ R   + D   R  R       V +     D      E A  E
Sbjct: 35  YVLGMFPYTSGTLHMGHVRNYAITDAYARYRRLRG--DDVLHPMGW-DAFGLPAENAAYE 91

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLA 115
                        T    ++  ++   L 
Sbjct: 92  RA-----SDPESWTRACIRRMREELETLG 115


>gi|329768992|ref|ZP_08260415.1| valyl-tRNA synthetase [Gemella sanguinis M325]
 gi|328835799|gb|EGF85522.1| valyl-tRNA synthetase [Gemella sanguinis M325]
          Length = 879

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 12/110 (10%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      + Q      +    +  IH    + +GRKMSKS GN +   E++E  
Sbjct: 482 TGYDIIFFWVARMVFQGLEFTGVRPFEDCLIHGLVRDEQGRKMSKSLGNGVDPMEVIE-- 539

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       P   + ++ +++  +   ++K    S 
Sbjct: 540 -----EYGADSLRYFLATNS--TPGQDLRYSTEKIEASWNYINKIWNASR 582


>gi|325131536|gb|EGC54243.1| leucyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139210|gb|EGC61756.1| leucyl-tRNA synthetase [Neisseria meningitidis ES14902]
 gi|325141589|gb|EGC64055.1| leucyl-tRNA synthetase [Neisseria meningitidis 961-5945]
 gi|325197607|gb|ADY93063.1| leucyl-tRNA synthetase [Neisseria meningitidis G2136]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772


>gi|323465759|gb|ADX69446.1| Methionyl-tRNA synthetase [Lactobacillus helveticus H10]
          Length = 658

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 11/119 (9%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNA   I  D + R  R    +   T+    TD         + E  +           
Sbjct: 22  IGNAYTTIAADTMARYKRSQGYD---TFFLTGTD-----EHGLKIEQKAEAQGIKPQEFV 73

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            K    + K    L         R T   H+  +  + + ++  G  Y       +   
Sbjct: 74  DKMAASYKKLWKSLDISY-DKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSVE 131


>gi|323488399|ref|ZP_08093646.1| leucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
 gi|323397906|gb|EGA90705.1| leucyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
          Length = 803

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 52/175 (29%), Gaps = 36/175 (20%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADR------IEKTANIWIHNGFLNLEGRKMSKSNG 283
             D++ GG +    H                    E    ++     L     KMSKS G
Sbjct: 523 PVDVYIGGAEHAVLHLLYARFWHKVLYDIGVVSTKEPFQKLFNQGMILGEGNEKMSKSKG 582

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++++E+         A  +R+  M M      I ++   L  +   L +  +   
Sbjct: 583 NVVNPDQIIESHG-------ADTLRMYEMFMGPLEASIAWSTNGLDGSRRFLDRIWRLLM 635

Query: 343 SKGIIDPAVLSALY---------------ND-----LNTVSAIQALHKLARESTK 377
            +  +   +  +                 +D      NT  AI  +     E  K
Sbjct: 636 DEEQLSAKITDSNDGKLEKVYHQTVKKVTDDFEGLRFNT--AISQMMVFINEGYK 688


>gi|222475548|ref|YP_002563965.1| valyl-tRNA synthetase (valS) [Anaplasma marginale str. Florida]
 gi|222419686|gb|ACM49709.1| valyl-tRNA synthetase (valS) [Anaplasma marginale str. Florida]
          Length = 822

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 28/91 (30%), Gaps = 9/91 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-------IDDKIIERARQ 85
           PTV    H+G+       D + R  R     K V Y     D       + +KI +    
Sbjct: 52  PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGFDDNGLPTERLVEKIKKLRAV 109

Query: 86  EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
           +            ++ +   +F     RL  
Sbjct: 110 QLERAEFTKMCREVSHEFRTKFRNLFRRLGI 140


>gi|184200760|ref|YP_001854967.1| valyl-tRNA synthetase [Kocuria rhizophila DC2201]
 gi|183580990|dbj|BAG29461.1| valyl-tRNA synthetase [Kocuria rhizophila DC2201]
          Length = 861

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +          N  +    L+ + +KMSKS GN +   ++LE        + A  +R   
Sbjct: 554 AETLAGTVPWTNTALSGWILDPDRKKMSKSKGNVVVPTDVLE-------KYGADAVRYWA 606

Query: 312 LMT 314
              
Sbjct: 607 ASA 609


>gi|182677992|ref|YP_001832138.1| isoleucyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182633875|gb|ACB94649.1| isoleucyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 1001

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC    +     +  H   L+ +GRKMSKS GN      +++          A ++RL +
Sbjct: 645 SCGTRGMAPYDAVLTHGFVLDEQGRKMSKSLGNVTAPQSVIKDAG-------ADILRLWV 697

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +    Q L+       K   T
Sbjct: 698 AASDYSDDLRIGKQILSTFTETYKKLRNT 726


>gi|161170215|gb|ABX59186.1| synthetase class I [uncultured marine group II euryarchaeote
           EF100_57A08]
          Length = 525

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 52/344 (15%), Positives = 100/344 (29%), Gaps = 75/344 (21%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD--------IDDKIIERA 83
           G T     HIG+ R ++  ++++R       +    ++ +  D        +  +     
Sbjct: 24  GITPSGEFHIGHLREILSAEMIHRACLDAGLDSRYIFIVDSMDPLRRVYSFLSPEYERYI 83

Query: 84  RQEHPSIPINDAIS-------IITSKNTQQFVKDTTRLACLAPTHQPRAT---------- 126
                 IP  D+                  F++  +++           T          
Sbjct: 84  GCPLAFIPAPDSDGNPDPEAGSYADHFLSPFLEALSQIGVFPEVIMNHETYSNGKFATKI 143

Query: 127 -------NHIPQMIYLIQ--NIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMG 176
                  + I ++I  I    +  +   Y+    +   D  ++  Y          +   
Sbjct: 144 HSAIEQADAIREIIESISGRELDENWFPYKPLGSDGSMDGVTVTGY----------EHPF 193

Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH-IECSAMSSHYLGKVFDIHG 235
               +++ K   AD     R    +  W   W   R G H + C      + G      G
Sbjct: 194 VHWTDRHGKSGSADI----RKAEGKLPWRIDWAA-RWGIHGVTCEPAGKDH-GAA----G 243

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK-MSKSNGNFITINELLET 294
           G  D   P         C     E  +   +   ++ ++G   MS S+GN I   E L  
Sbjct: 244 GSFDTGLP--------ICRLLGSEPPSK--MVYEWIQVKGAGPMSSSSGNTIGPVEALSL 293

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDF-TVQRLTEAEILLSKW 337
                   P  ++R  +  +     IDF T   L +      + 
Sbjct: 294 V-------PPEIVRYLIAGSKMNRHIDFDTGSALFQMADEYERL 330


>gi|114798244|ref|YP_760384.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114738418|gb|ABI76543.1| valyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 906

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 7/57 (12%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   +++IH   L+ +G+KMSKS GN +   +L+         + A  +R AM
Sbjct: 528 FTGQVPFKDVYIHALVLDEKGQKMSKSKGNVMDPLDLIN-------EYGADALRFAM 577


>gi|313888501|ref|ZP_07822168.1| leucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
 gi|312845530|gb|EFR32924.1| leucine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
          Length = 803

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 24/150 (16%)

Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
            E       H   L     KMSKS GN +  ++++       R + A  +R   M +  +
Sbjct: 562 KEPYQKRTSHGMILGGNNEKMSKSRGNVVNPDDIV-------RDYGADTLRCYEMFIGDF 614

Query: 317 REPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
            +P+ ++   +      L +     +           +             +  +HK  +
Sbjct: 615 EKPVPWSENGVKGCRRFLERVWNLQEIVVDGDEYSKEL-------------VTEIHKTIK 661

Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           + T+++  L    A A ++ +      L K
Sbjct: 662 KVTEDYANLKANTAIAQLMTLSNEFSDLGK 691


>gi|229815165|ref|ZP_04445502.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
 gi|229809395|gb|EEP45160.1| hypothetical protein COLINT_02211 [Collinsella intestinalis DSM
           13280]
          Length = 862

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 23/160 (14%), Positives = 46/160 (28%), Gaps = 19/160 (11%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA---RQEHPS 89
           P      H+G+AR   + D + R  R    +  V +              A     +  +
Sbjct: 57  PYPSGDLHMGHARNYTIGDAMARQARMRGYD--VLHPIGFDAFGLPAENAAIKHNTQAAA 114

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACL--APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
               +    + +     F  D  RL     +P +  R    I +       +   G  Y 
Sbjct: 115 WTYRNMDQALATMKRMGFSYDMDRL-VKTCSPDYY-RWGQWIFE------KLWERGLVYR 166

Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
             N +             +  ++ E +   R   +  K++
Sbjct: 167 KKNPVN-WCPKCET--VLANEQVTEGRCW-RCDSEVEKRD 202


>gi|166154419|ref|YP_001654537.1| leucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|166155294|ref|YP_001653549.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|301335678|ref|ZP_07223922.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
 gi|238687406|sp|B0B9V9|SYL_CHLT2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238687463|sp|B0BBI9|SYL_CHLTB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|165930407|emb|CAP03900.1| leucyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
 gi|165931282|emb|CAP06854.1| leucyl-tRNA synthetase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 819

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 41/139 (29%), Gaps = 18/139 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      I         
Sbjct: 48  HVGHLIGYTATDIVARCKRAQGF--SVLHPMGWDSFGLPAEQYA------IRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN   F K  T +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TEKNIANFKKQLTAMGFSYDESREFAT-SDPEYYKWTQKLFLILYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQ 173
            +  P  G+  S  +I+  
Sbjct: 155 VNYCPELGTVLSNEEIENG 173


>gi|67458621|ref|YP_246245.1| valyl-tRNA synthetase [Rickettsia felis URRWXCal2]
 gi|75536913|sp|Q4UMX8|SYV_RICFE RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|67004154|gb|AAY61080.1| Valyl-tRNA synthetase [Rickettsia felis URRWXCal2]
          Length = 859

 Score = 37.9 bits (87), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 54/161 (33%), Gaps = 42/161 (26%)

Query: 260 KTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
              NI + +G+ L  +  KMSKS GN +   +LLE        + + VIR     +    
Sbjct: 566 PWKNI-MVSGWCLAEDRSKMSKSKGNVLVPEKLLE-------QYGSDVIRYWSANSKLGA 617

Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
              ++   +   + L++K                       N    +    +  ++  K 
Sbjct: 618 DTAYSEDVMKNGKRLVNKLW---------------------NAAKFVSIHFEKLKDKDKQ 656

Query: 379 HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
             L            ++V ++  N+     I KLV+   + 
Sbjct: 657 AKL------------LDVKEKITNEFDQWMINKLVELVKLA 685


>gi|332559307|ref|ZP_08413629.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
 gi|332277019|gb|EGJ22334.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
          Length = 847

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 13/139 (9%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + YV    P      H+G+ R   + DV+ R  +       V +           
Sbjct: 28  DPARPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVAR--QKAAAGFSVLHPMGWDAFGMPA 85

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
              A +              T  N          L       +  AT    +  Q   + 
Sbjct: 86  ENAAMERGGH------PKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMF 139

Query: 137 QNIILHGHAYEANNEIIFD 155
            +++  G  Y  N  + +D
Sbjct: 140 IDMMEAGLVYRKNAVVNWD 158


>gi|319944052|ref|ZP_08018332.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
 gi|319742813|gb|EFV95220.1| methionyl-tRNA synthetase [Lautropia mirabilis ATCC 51599]
          Length = 789

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+I+ H     A    A  +    NI++H GFL + G KMSKS G  ++  + L
Sbjct: 375 VHFIGKDIIYFHTLFWPAMLKFA-GMHTPDNIFVH-GFLTISGEKMSKSRGTGLSPKKYL 432

Query: 293 ETKKFGGRSWPAPVIRLAM 311
           E             +R  +
Sbjct: 433 EL------GMNPEWLRYYL 445


>gi|161506812|ref|YP_001576766.1| methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
 gi|160347801|gb|ABX26475.1| Methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
          Length = 658

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 33/119 (27%), Gaps = 11/119 (9%)

Query: 41  IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
           IGNA   I  D + R  R    +   T+    TD         + E  +           
Sbjct: 22  IGNAYTTIAADTMARYKRSQGYD---TFFLTGTD-----EHGLKIEQKAEAQGIKPQEFV 73

Query: 101 SKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
            K    + K    L         R T   H+  +  + + ++  G  Y       +   
Sbjct: 74  DKMAASYKKLWKSLDISY-DKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSVE 131


>gi|157872813|ref|XP_001684933.1| glutamyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68128003|emb|CAJ06769.1| putative glutamyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 594

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 35/110 (31%), Gaps = 26/110 (23%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
            F HIG+A+  +V     R+L   Y  K +         DD    + +            
Sbjct: 57  GFLHIGHAKAALV----NRMLADAYEGKMLFR------FDDTNPSKEK------------ 94

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
                       +D   L     +    ++++   M    +++I  G AY
Sbjct: 95  ----EHFEAAIEEDLKTLGVRYDSGPTYSSDYFDLMFEKAEDMIKRGLAY 140


>gi|77464417|ref|YP_353921.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
 gi|123744224|sp|Q3IZL4|SYL_RHOS4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|77388835|gb|ABA80020.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
          Length = 847

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 13/139 (9%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + YV    P      H+G+ R   + DV+ R  +       V +           
Sbjct: 28  DPARPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVAR--QKAAAGFSVLHPMGWDAFGMPA 85

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
              A +              T  N          L       +  AT    +  Q   + 
Sbjct: 86  ENAAMERGGH------PKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMF 139

Query: 137 QNIILHGHAYEANNEIIFD 155
            +++  G  Y  N  + +D
Sbjct: 140 IDMMEAGLVYRKNAVVNWD 158


>gi|325119996|emb|CBZ55549.1| putative tRNA synthetase [Neospora caninum Liverpool]
          Length = 2183

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 14/112 (12%)

Query: 236  GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT--INELLE 293
             G D++F     +        +      + +H   ++ +G+K+SK+ GN     ++ L++
Sbjct: 1582 TGEDILFFWVLRQFILCSALTQRAPFTRVTLHGLLVDRDGKKLSKTKGNVERGYLDRLID 1641

Query: 294  TKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
                      A  +R   L      P   + F  + L  A   L K      
Sbjct: 1642 EAG-------ADALRWTFLSA--MTPGAAVAFDEEALAAARRFLHKLWNAGR 1684


>gi|292487610|ref|YP_003530482.1| leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
 gi|292898849|ref|YP_003538218.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291198697|emb|CBJ45806.1| leucyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
 gi|291553029|emb|CBA20074.1| Leucyl-tRNA synthetase [Erwinia amylovora CFBP1430]
          Length = 860

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 16/145 (11%)

Query: 15  ITEFQAIDPSNIRMYVCG---PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
              F+ I+      Y C    P      H+G+ R   + DV+ R  R           +N
Sbjct: 21  KQTFKVIEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG--------KN 72

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
           +             E  ++  N A +  T  N          L      H+  AT   P+
Sbjct: 73  VLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIDYMKNQLKLLGFGYDWHRELAT-CQPE 131

Query: 132 MIYLIQ----NIILHGHAYEANNEI 152
                Q     +   G  Y+  + +
Sbjct: 132 YYRWEQWFFTKLYEKGLVYKKTSAV 156


>gi|23097501|ref|NP_690967.1| methionyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
 gi|25009346|sp|P59079|SYM_OCEIH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|22775724|dbj|BAC12002.1| methionine-tRNA ligase [Oceanobacillus iheyensis HTE831]
          Length = 673

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIGNA   I  DV+ R  R    +  V Y+    +   KI ++A++      +N +    
Sbjct: 21  HIGNAYTTIACDVMARYKRMRGFD--VFYLTGSDEHGQKIEQKAKE------MNISPKAY 72

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
                +   K    L         R T   H   +  + +  +  G  Y    E  +   
Sbjct: 73  VDDMAEGMKKLWNTLEISN-DKFIRTTEEQHKKVVADIFERFLEQGDIYLDEYEGWYSVP 131

Query: 158 SIPNY 162
               Y
Sbjct: 132 DETFY 136


>gi|157826106|ref|YP_001493826.1| valyl-tRNA synthetase [Rickettsia akari str. Hartford]
 gi|166225528|sp|A8GPJ3|SYV_RICAH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157800064|gb|ABV75318.1| valyl-tRNA synthetase [Rickettsia akari str. Hartford]
          Length = 812

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 16/111 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I ++          NI + +G+ L  +  KMSKS GN +   
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWGNI-MVSGWCLAEDRSKMSKSKGNVLVPE 548

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           +LLE        + + VIR     +       ++   +   + L++K    
Sbjct: 549 KLLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNA 592


>gi|294495458|ref|YP_003541951.1| isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
 gi|292666457|gb|ADE36306.1| Isoleucyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
          Length = 1056

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 18/111 (16%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       ++ +H   L+  G+KMSKS GN +  +E++E        + A  +R  +
Sbjct: 570 SMVAFGQAPYKSVLMHGFTLDSTGKKMSKSLGNVVQPHEVIE-------KYGADSLRCYV 622

Query: 312 LMTHYREPID---FTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLS 353
           L +    P +   F    L      ++      ++P    +    DP  +S
Sbjct: 623 LSSS--APWEDLKFNQDELATIHRTINILWNVYRFPLPYMALDEFDPQEVS 671


>gi|78485381|ref|YP_391306.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
 gi|123728026|sp|Q31GU1|SYM_THICR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|78363667|gb|ABB41632.1| methionyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
          Length = 680

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A      A I+ H GFL ++G+KMSKS G FI     L+
Sbjct: 289 HFIGKDIIYFHALFWPAMLSGAGFRTPNA-IFSH-GFLTVDGQKMSKSRGTFIMAKTYLD 346

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 347 -------HLNPEYLRYYF 357


>gi|50365171|ref|YP_053596.1| valyl-tRNA synthetase [Mesoplasma florum L1]
 gi|81827303|sp|Q6F1B1|SYV_MESFL RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|50363727|gb|AAT75712.1| valyl tRNA synthetase [Mesoplasma florum L1]
          Length = 873

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 14/126 (11%)

Query: 222 MSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
             S Y  +     +   G D+IF      I Q+          ++ IH    +  G KMS
Sbjct: 468 FESKYFKEYLPNGVLVTGHDIIFSWVSRMIFQTIEYTGQIPFKDVLIHGLVRDEHGAKMS 527

Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK 336
           KS GN I   +++           +  +R ++L      P   I ++  ++  A   ++K
Sbjct: 528 KSLGNGIDPMDVIVNNG-------SDSLRFSLLTNS--TPGQDIRYSDSKVKAAWNFINK 578

Query: 337 WPQTST 342
               S 
Sbjct: 579 LWNASR 584


>gi|325129489|gb|EGC52318.1| leucyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGGEQGRAVAQEVL 772



 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGF--AIDWA 122

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 123 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159


>gi|325095042|gb|EGC48352.1| leucyl-tRNA synthetase [Ajellomyces capsulatus H88]
          Length = 964

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/192 (14%), Positives = 52/192 (27%), Gaps = 37/192 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPS 89
           P      H+G+ R   + DVL R                  D+   +   A     E+ +
Sbjct: 73  PYPSGALHLGHVRVYTISDVLARFKHMKGY-----------DVLHPMGWDAFGLPAENAA 121

Query: 90  IPINDAISIITSKNTQQFVKDTTRLACLAP---THQPRATN---HIPQMIYLIQNIILHG 143
           I      +  T +N     +    +             ++    H  ++  +   +   G
Sbjct: 122 IERGIDPAKWTMQNIANMKEQLRAIGARFDWDRELMTCSSEFYKHTQRIFLM---LYQEG 178

Query: 144 HAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF---------IL 193
            AY+A   +              +  ++D      R   K  K     +          L
Sbjct: 179 LAYQAKARVNYDPIDKT----VLANEQVDANGCSWRSGAKVEKLELKQWFFRITAFKEAL 234

Query: 194 WKRSTPMEPGWE 205
            K    +E GW 
Sbjct: 235 LKDLESLEAGWP 246


>gi|312171717|emb|CBX79975.1| Leucyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
          Length = 860

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 43/145 (29%), Gaps = 16/145 (11%)

Query: 15  ITEFQAIDPSNIRMYVCG---PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
              F+ I+      Y C    P      H+G+ R   + DV+ R  R           +N
Sbjct: 21  KQTFKVIEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG--------KN 72

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
           +             E  ++  N A +  T  N          L      H+  AT   P+
Sbjct: 73  VLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIDYMKNQLKLLGFGYDWHRELAT-CQPE 131

Query: 132 MIYLIQ----NIILHGHAYEANNEI 152
                Q     +   G  Y+  + +
Sbjct: 132 YYRWEQWFFTKLYEKGLVYKKTSAV 156


>gi|218767529|ref|YP_002342041.1| leucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|14285776|sp|Q9JW39|SYL_NEIMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|121051537|emb|CAM07834.1| putative leucyl-tRNA synthetase [Neisseria meningitidis Z2491]
 gi|319409793|emb|CBY90101.1| leucyl-tRNA synthetase (leucine-tRNA ligase; LeuRS) [Neisseria
           meningitidis WUE 2594]
          Length = 910

 Score = 37.9 bits (87), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 667 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 719

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 720 RRLWRTVYEYLKQGEAVNAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 777

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K           A  +L
Sbjct: 778 IAAVMELLNQYDKTDTGSEQGRTVAQEVL 806


>gi|327385510|gb|AEA56984.1| Isoleucyl-tRNA synthetase [Lactobacillus casei BD-II]
          Length = 948

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  +     I      L+ +GRKMSKS GN I    +        + + A +IRL +
Sbjct: 588 SVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATI-------EKQFGAEIIRLWV 640

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---- 363
                   +  +V    +      K   T      + G  DP   +  Y++L +V     
Sbjct: 641 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMM 700

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             +  + K  + +   +D   +    +  L  ++   +L+    +  IE 
Sbjct: 701 VRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEA 750


>gi|221640308|ref|YP_002526570.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
 gi|254782511|sp|B9KMH8|SYL_RHOSK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|221161089|gb|ACM02069.1| Leucyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
          Length = 847

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 13/139 (9%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + YV    P      H+G+ R   + DV+ R  +       V +           
Sbjct: 28  DPARPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVAR--QKAAAGFSVLHPMGWDAFGMPA 85

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
              A +              T  N          L       +  AT    +  Q   + 
Sbjct: 86  ENAAMERGGH------PKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMF 139

Query: 137 QNIILHGHAYEANNEIIFD 155
            +++  G  Y  N  + +D
Sbjct: 140 IDMMEAGLVYRKNAVVNWD 158


>gi|145245972|ref|XP_001395235.1| isoleucyl-tRNA synthetase [Aspergillus niger CBS 513.88]
 gi|134079947|emb|CAK48431.1| unnamed protein product [Aspergillus niger]
          Length = 1005

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 42/120 (35%), Gaps = 21/120 (17%)

Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE------ 293
           L F  H  ++A    A       N+  H   L+ EGRKMSKS GN I    +++      
Sbjct: 599 LTFIAH--QLASGHTASPRAPFKNLVTHGFTLDEEGRKMSKSIGNVIQPESIMDGTLLPP 656

Query: 294 ---TKKFGGRSWP----------APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               K  G +                +R+ +  + Y   +    Q L      L K+  T
Sbjct: 657 LKPRKGKGKKQAENQAPVYDALGPDALRMWVASSDYTRDVVIGKQVLQTVNTSLHKYRVT 716


>gi|56964107|ref|YP_175838.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
 gi|81822091|sp|Q5WFI3|SYI_BACSK RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56910350|dbj|BAD64877.1| isoleucyl-tRNA synthetase [Bacillus clausii KSM-K16]
          Length = 923

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   + +     +  H   ++ EG+KMSKS GN +  N ++       +   A ++RL +
Sbjct: 569 SVAINGVAPYKGVLSHGFVMDGEGKKMSKSLGNIVVPNTVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+     +   L +      K   T
Sbjct: 622 ASVDYQADSRVSDSILKQVAETYRKIRNT 650


>gi|126463258|ref|YP_001044372.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
 gi|166231636|sp|A3PMN4|SYL_RHOS1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|126104922|gb|ABN77600.1| leucyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
          Length = 847

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 40/139 (28%), Gaps = 13/139 (9%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + YV    P      H+G+ R   + DV+ R  +       V +           
Sbjct: 28  DPARPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVAR--QKAAAGFSVLHPMGWDAFGMPA 85

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLI 136
              A +              T  N          L       +  AT    +  Q   + 
Sbjct: 86  ENAAMERGGH------PKDWTYGNIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAMF 139

Query: 137 QNIILHGHAYEANNEIIFD 155
            +++  G  Y  N  + +D
Sbjct: 140 IDMMEAGLVYRKNAVVNWD 158


>gi|117925437|ref|YP_866054.1| isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
 gi|117609193|gb|ABK44648.1| Isoleucyl-tRNA synthetase [Magnetococcus sp. MC-1]
          Length = 954

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 31/74 (41%), Gaps = 7/74 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++ +G KMSKS GN I   +++       + + A ++R+ +    Y   I  + + 
Sbjct: 610 HGFVVDGKGHKMSKSRGNVIAPEKVI-------KQYGADILRMWVSAEDYAGDIRISDEI 662

Query: 327 LTEAEILLSKWPQT 340
           L        +   T
Sbjct: 663 LKGLSDAYRRIRNT 676


>gi|328945573|gb|EGG39724.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1087]
          Length = 937

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 35/186 (18%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS-AIQA--- 367
                   +  ++  L +      K   T           L A  +D N    A+     
Sbjct: 623 TSVDSSNDVRISMDILGQVSETYRKIRNTLR--------FLIANTSDFNPAEDAVAYEEL 674

Query: 368 -------------LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKL- 412
                        L +  R++  + + L I+ A  + + I++   +L+    +  IE   
Sbjct: 675 RSVDKYMTIRFNQLVETIRKAYADFEFLTIYKAIVNFVTIDLSAFYLDFAKDVVYIEAAK 734

Query: 413 -VQERL 417
            ++ R 
Sbjct: 735 SLERRQ 740


>gi|238749949|ref|ZP_04611453.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
 gi|238711878|gb|EEQ04092.1| Methionyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
          Length = 635

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 20/193 (10%)

Query: 228 GKVFDI-HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
           G   D+ H  G D+++ H     A    +   + T N+++H G++ + G KMSKS G FI
Sbjct: 244 GSTTDLYHFIGKDIVYFHSLFWPAMLEGSQFRKPT-NLFVH-GYVTVNGAKMSKSRGTFI 301

Query: 287 TINELLETKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEIL--LSKWPQ- 339
                L       +   A  +R      L +  R + ID  ++   +      ++K    
Sbjct: 302 KAGTYL-------KHLDADCLRYYYAAKLSS--RIDDIDLNLEDFVQRVNADIVNKVVNL 352

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCK 398
            S + G I       L + L      +     A      +       A   I+ + ++  
Sbjct: 353 ASRNAGFISKRFDGKLADQLADPELYKTFTDAAVSIADAYSNRESSKAIREIMALADIAN 412

Query: 399 EHLNKNISIAIEK 411
            ++++     + K
Sbjct: 413 RYVDEQAPWVVAK 425


>gi|229822985|ref|ZP_04449055.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271]
 gi|229787798|gb|EEP23912.1| hypothetical protein GCWU000282_00278 [Catonella morbi ATCC 51271]
          Length = 927

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 7/118 (5%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +  YL    D++  G D       +    S  A  +     +      L+ +G KMSKS 
Sbjct: 541 ARDYLTFPADLYLEGSDQYRGWFNSSFTTSVAAKGVPPYKAVLSQGFVLDGKGNKMSKSL 600

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           GN I   E++           A +IRL +L       +  +   L +      K   T
Sbjct: 601 GNVIVPEEVMNELG-------ADIIRLWVLSVDSESDVRISKDILKQIAEAYRKIRNT 651


>gi|77553401|gb|ABA96197.1| nuclease, putative, expressed [Oryza sativa Japonica Group]
 gi|215737121|dbj|BAG96050.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 235

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
               + N+ + + +LV  R    K + + SAD +   L+  G+ +
Sbjct: 58  DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 102


>gi|162448522|ref|YP_001610889.1| hypothetical protein sce0252 [Sorangium cellulosum 'So ce 56']
 gi|161159104|emb|CAN90409.1| hypothetical protein predicted by Glimmer/Critica [Sorangium
            cellulosum 'So ce 56']
          Length = 3746

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 15/111 (13%)

Query: 316  YREPIDF--TVQRLTEAEILLSKWPQTS-TSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
            YR  +D+     RL +A   +++  +T      +      +AL  D N   A+ AL +L 
Sbjct: 2250 YRAALDYRKDEDRL-DALHTIARLERTELREPALAIETYRAALDVDENDARALDALTELY 2308

Query: 373  RESTKNHDLLPIFNASAHI-----------LGIEVCKEHLNKNISIAIEKL 412
            RE  +  DL  ++   A             L +        ++ S AI++L
Sbjct: 2309 RELDRPRDLADLYLRRAEAAPNGERAAPYRLALAALLRTRLEDTSGAIDQL 2359


>gi|55378488|ref|YP_136338.1| valyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|74579342|sp|Q5V1H0|SYV_HALMA RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|55231213|gb|AAV46632.1| valyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 901

 Score = 37.9 bits (87), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 38/117 (32%), Gaps = 13/117 (11%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   N+ I+   L+     MSKS GN I  +E+LE        +P    R     T
Sbjct: 550 HTGEVPFENVMINGMVLDENREAMSKSKGNVIPPSEVLE-------EFPVDATRYWAAGT 602

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
              +   +    L   E LL K    S     + PA         +    + A+ + 
Sbjct: 603 SIGDDFPYKEGDLEAGERLLQKLWNASRLVDQLTPAARP------DEPEELAAVDEW 653


>gi|257386964|ref|YP_003176737.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
 gi|257169271|gb|ACV47030.1| leucyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
          Length = 919

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 16/92 (17%)

Query: 29  YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
           YV G   Y     H+G+ R   + D + R  R            N  D+   +   A   
Sbjct: 38  YVLGMFPYTSGSLHMGHIRNYAITDAVARYRR-----------MNGEDVLHPMGWDAFGL 86

Query: 85  -QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
             E+ +   +      T    +Q   +  R+ 
Sbjct: 87  PAENAAYERDTDPESWTRTCIEQMRDELERMG 118


>gi|255022653|ref|ZP_05294639.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
          Length = 619

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +  + F +   +L     T   R T   H   +  + + ++  G  Y    E  +  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFEQLLEQGDIYLGEYEGWYSV 131

Query: 157 S 157
           S
Sbjct: 132 S 132


>gi|254436724|ref|ZP_05050218.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
 gi|198252170|gb|EDY76484.1| leucyl-tRNA synthetase [Octadecabacter antarcticus 307]
          Length = 770

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 26/105 (24%), Gaps = 11/105 (10%)

Query: 14  KITEFQ-AIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           K   F+        + YV    P      HIG+ R   + DV+ R          V +  
Sbjct: 19  KAETFKATRSDDKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARY--KLATGHNVLHPM 76

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                       A      +         T +N    V     L 
Sbjct: 77  GFDAFGMPAENAA------MQTGIHPKDYTYQNIDDMVAQMKPLG 115


>gi|160903090|ref|YP_001568671.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95]
 gi|160360734|gb|ABX32348.1| arginyl-tRNA synthetase [Petrotoga mobilis SJ95]
          Length = 549

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 21/114 (18%)

Query: 219 CSAMSSHY------LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
           C  ++ HY         V DI G       P     +A +      E    I +H  F+N
Sbjct: 311 CDDIAYHYYKYLRGFDTVIDIMGSDHHGHIPRM---MASAKALGLPENFLKIILH-QFVN 366

Query: 273 LEGR----KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
           ++      KMS  +G F T+++L++             +R    M      ++F
Sbjct: 367 VKKGEEIIKMSTRSGEFFTLDDLIQNVGK-------DAVRYFFAMVDPDTTLNF 413


>gi|148653506|ref|YP_001280599.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
 gi|187647756|sp|A5WG58|SYM_PSYWF RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|148572590|gb|ABQ94649.1| methionyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
          Length = 697

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 29/83 (34%), Gaps = 15/83 (18%)

Query: 234 HGGGLDLIFPHH---ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H  G D+++ H       +A S         A+     GFL + G KMSKS G FI    
Sbjct: 302 HFIGKDIVYFHALFWPAMLAGSEYRTPTGVFAH-----GFLMVNGDKMSKSRGTFI---- 352

Query: 291 LLETKKFGGRSWPAPVIRLAMLM 313
                +   +      +R     
Sbjct: 353 ---QAETFAKHLNPEYLRYYFAS 372


>gi|83816700|ref|YP_445066.1| leucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
 gi|123753431|sp|Q2S415|SYL_SALRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|83758094|gb|ABC46207.1| leucyl-tRNA synthetase [Salinibacter ruber DSM 13855]
          Length = 863

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 40/161 (24%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPID----FTVQ 325
           ++    KMSKS GN I  +++++        + A  +RL  M M     P++    ++  
Sbjct: 629 VDARSHKMSKSRGNVINPDDVVD-------EYGADTLRLYEMFMG----PLEQDKPWSTD 677

Query: 326 RLTEAEILLSKWPQ---------TSTSKGIIDPAVLSAL------------YNDLNTVSA 364
            +      L++  +          + S    D   L  L              D NT  A
Sbjct: 678 DMEGVHRFLNRIWRLVVDADSGGLAVSDEEPDREQLRTLHRTIKTVTEDIEARDFNT--A 735

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           I A+ +    + K  D LP   A+  +L +     HL + +
Sbjct: 736 IAAMMEFVNAANK-WDALPRQVATPFVLLLSPFAPHLAEEL 775


>gi|289191089|gb|ADC93657.1| aminoacyl tRNA synthetase AK-1 [synthetic construct]
          Length = 860

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 31/105 (29%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           K   F    D S  + Y    + Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  KKRTFEVTEDESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLG 116


>gi|222148981|ref|YP_002549938.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
 gi|221735967|gb|ACM36930.1| valyl-tRNA synthetase [Agrobacterium vitis S4]
          Length = 947

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
              + +E    +++H    +  G+KMSKS GN I   EL++        + A  +R  +
Sbjct: 567 EAGNPVEPFETVYVHALVRDKNGQKMSKSKGNVINPLELID-------EYGADALRFTL 618


>gi|13540863|ref|NP_110551.1| valyl-tRNA synthetase [Thermoplasma volcanium GSS1]
 gi|74576260|sp|Q97CR9|SYV_THEVO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
          ligase; Short=ValRS
 gi|14324246|dbj|BAB59174.1| tRNA synthetase Val [Thermoplasma volcanium GSS1]
          Length = 790

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)

Query: 18 FQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          F   +   +  +    PTV    H+G++      D + R  R     
Sbjct: 24 FIPSEREKVFTIDTPPPTVSGKMHMGHSFSYSHIDFIARYKRMRGYH 70


>gi|114563417|ref|YP_750930.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
 gi|122299549|sp|Q081H3|SYM_SHEFN RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114334710|gb|ABI72092.1| methionyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
          Length = 683

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A  I K  +++ H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGA-GIRKPTSVYAH-GYVTVNGSKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                  +     +R       Y   ++    R+ + ++ L  + Q   S 
Sbjct: 349 -------NLDPEYLRYY-----YAAKLN---SRIDDLDLNLEDFAQRVNSD 384


>gi|325292070|ref|YP_004277934.1| Isoleucyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325059923|gb|ADY63614.1| Isoleucyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 967

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +GRK SKS GN +   ++
Sbjct: 596 DVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVVTHGFTMDEQGRKQSKSLGNVVAPQDV 655

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 656 MKESG-------ADILRLWVMTTDY-----WEDQRLGKAIIQTNIDAYRKLRNTVRWMLG 703

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L K+ R+     D   I  A      
Sbjct: 704 TLAHDKGEEIAYA----DL--PELEKLVLHRLSELDKVVRDGYDAFDFKKIARALIDFAN 757

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 758 VELSAFYFD 766


>gi|312377089|gb|EFR24006.1| hypothetical protein AND_11736 [Anopheles darlingi]
          Length = 495

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 11/126 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT-YVRNITDIDDKIIERARQEHPSIPIN 93
           V    HIG+    ++ D ++R  R    EK  + ++   TD     I++A   H      
Sbjct: 26  VNAAPHIGHLYSAVIADAVHRFNRIATPEKSRSCFLSTGTDEHGMKIQQAAVLHS-TSTE 84

Query: 94  DAISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
           D  + I+++  + F +   D +R        +   T+H   +    + +   G  Y AN 
Sbjct: 85  DYCNSISARYRELFRQFRVDYSRF------IRTTETDHRRAVQTFWRTLEASGSIYSANY 138

Query: 151 EIIFDT 156
              +  
Sbjct: 139 AGWYCV 144


>gi|237751536|ref|ZP_04582016.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
 gi|229372902|gb|EEO23293.1| leucyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
          Length = 827

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 34/82 (41%), Gaps = 13/82 (15%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT---H 315
           E  +++ +  G +  +G KMSKS GN +    ++E       S+ A   RL +L      
Sbjct: 578 EPFSHL-LTQGMVLKDGVKMSKSLGNVVEPRHIIE-------SYGADTARLFILFAAPSS 629

Query: 316 YREPIDFTVQRLTEAEILLSKW 337
           Y   +D+    +      + + 
Sbjct: 630 Y--ALDWNDNSVVGCYKFICRL 649


>gi|256826934|ref|YP_003150893.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256583077|gb|ACU94211.1| methionyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 526

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/155 (14%), Positives = 41/155 (26%), Gaps = 18/155 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   I  DVL R  R    +           +        +    +     
Sbjct: 15  VNAAPHLGTAYTTIGADVLSRYKRMDGYDVAF--------VGGMDEHGQKVADTAAKKGM 66

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI----ILHGHAYEANN 150
                       F+     L         R T    +    +Q         G  Y+ + 
Sbjct: 67  TPQAWCDSMEPAFLDAWNLLDITYTDIV-RTTE--ERQTRTVQRFWGDLYEKGWLYKDSY 123

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           +  +       Y   +   +++ + GT V  + H+
Sbjct: 124 DGWYCVHEETYY---AESDLEKDEDGTFVCPECHR 155



 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 73/210 (34%), Gaps = 37/210 (17%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+   H     A    A  +  T  ++ H GFL  +G KMSKS GN +   +L+ 
Sbjct: 263 HFVGKDITRFHCVIWPAMLMAA-GLPITHKVFGH-GFLLTKGEKMSKSKGNGVMPADLV- 319

Query: 294 TKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEIL--LSKWPQTSTS------- 343
                 R +     R   +    +    + +++R+ +       + W    +        
Sbjct: 320 ------RIFGVDAYRYYFMSDVQFGHDGNISMERMVQVYNADLANTWGNLVSRVFNMTGK 373

Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
              G +  A  SA+ N          L +LA    + +D      A+    G     + L
Sbjct: 374 YFDGKVPEAPSSAVENP---------LRELANNLYETYDAC---MAAVDFTGAAAAVQQL 421

Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYI 431
              +++ +E       +    K  + AD +
Sbjct: 422 ASRVNLYVED-SAPWNLA---KDPARADEL 447


>gi|225076903|ref|ZP_03720102.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
 gi|224951789|gb|EEG32998.1| hypothetical protein NEIFLAOT_01954 [Neisseria flavescens
           NRL30031/H210]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAV---------------------LSALYND------LNTVSA 364
            +  +T      +G    A                      ++ + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGEAVKAFAGSQDGLSKELKDLRHKLHSTIAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K           A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRTVAQEVL 772



 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 46/157 (29%), Gaps = 26/157 (16%)

Query: 6   KIYNTLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
           +I+N          + D S  + Y      Y     H+G+ R   + DVL R  R     
Sbjct: 22  RIFN---------VSEDASKPKYYCLSMFPYPSGKLHMGHVRNYTIGDVLSRFKRLNGFN 72

Query: 64  KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
                V      D         E+ ++  N A +  T  N +        L         
Sbjct: 73  -----VMQPMGWD---AFGMPAENAAMKNNVAPAAWTYDNIEYMKTQLKSLGF--AIDWA 122

Query: 124 RATNHI-PQMIYLIQ----NIILHGHAYEANNEIIFD 155
           R T    P+     Q     +   G  Y  N  + +D
Sbjct: 123 RETATCKPEYYRWEQWLFTKLFEKGIVYRKNGTVNWD 159


>gi|254469368|ref|ZP_05082773.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
 gi|211961203|gb|EEA96398.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
          Length = 584

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 13/56 (23%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTVQRLTE 329
           KMSK +GNFIT+ ++++             +R  ML   YR+    +DF   ++ E
Sbjct: 397 KMSKRSGNFITLRDVVDEVGV-------DAVRFMML---YRKNDAQLDFDFDKVKE 442


>gi|326693770|ref|ZP_08230775.1| isoleucyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
          Length = 930

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       N+      L+ +G KMSKS GN I+  ++ +            ++RL  
Sbjct: 572 SVAATGHAPYKNVLSQGFTLDGKGNKMSKSLGNTISPLDVADQMGI-------EILRLWT 624

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           +     + +  + + L +      K   T           L A  +D N
Sbjct: 625 ISVDTSQDMPVSNEILKQVSESYRKLRNTLR--------FLMANTSDFN 665


>gi|300693845|ref|YP_003749818.1| leucine--tRNA ligase (leus) [Ralstonia solanacearum PSI07]
 gi|299075882|emb|CBJ35192.1| putative leucine--tRNA ligase (leuS) [Ralstonia solanacearum PSI07]
          Length = 738

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/118 (15%), Positives = 32/118 (27%), Gaps = 21/118 (17%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+AR  ++ D   R  R    +  V Y              A               +
Sbjct: 60  HLGHARNYVLADAGARFKRMQGYD--VLYTSGFDTFGLPTELAASA------AGCLPGDL 111

Query: 100 TSKNTQQFVKDTTRLAC----LAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEAN 149
            S+      +   RL                 H+P+    +Q     +   GH +  +
Sbjct: 112 ASRCCDTMGEQFVRLGLGHDRRRIDQY-----HVPEFYRWVQWVFVRLFEAGHCFRRD 164


>gi|297661948|ref|XP_002809485.1| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Pongo
           abelii]
          Length = 1012

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRLAMLMTHYREPIDFT 323
           +H   L  +G KMSKS GN I  + ++   +   +   + A V+R  +  ++    +   
Sbjct: 653 VHGFTLGEKGEKMSKSLGNVIHPDVVINGGQDQSKEPPYGADVLRWWVADSNVFTEVAIG 712

Query: 324 VQRLTEAEILLSKWPQT 340
              L  A   +SK   T
Sbjct: 713 PSMLNAARDDISKLRNT 729


>gi|295098865|emb|CBK87954.1| valyl-tRNA synthetase [Eubacterium cylindroides T2-87]
          Length = 757

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 7/80 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF        Q+    +     ++ IH    + +GRKMSKS GN I   ++
Sbjct: 476 DVLVTGYDIIFFWVARMAFQTRYCMKNRPFKDVLIHGLVRDSQGRKMSKSLGNGIDPMDV 535

Query: 292 LETKKFGGRSWPAPVIRLAM 311
           +E          A  +R  +
Sbjct: 536 IENHG-------ADALRFFL 548


>gi|154148039|ref|YP_001406781.1| valyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
 gi|153804048|gb|ABS51055.1| valyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
          Length = 874

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 35/94 (37%), Gaps = 14/94 (14%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL- 309
           Q   A +     ++++H      +G+KMSKS+GN I   + +         + A ++R  
Sbjct: 508 QCEEATKKLPFHDVYLHALVKTSDGKKMSKSSGNVIDPIDKIN-------EYSADILRFT 560

Query: 310 ---AMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                +       I  + ++L       +K    
Sbjct: 561 LALLCIQG---RDIRLSEEKLILVRNFTNKLYNA 591


>gi|116327392|ref|YP_797112.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331994|ref|YP_801712.1| methionyl-tRNA synthetase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|122280273|sp|Q04Q66|SYM_LEPBJ RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|122284807|sp|Q054R6|SYM_LEPBL RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|116120136|gb|ABJ78179.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125683|gb|ABJ76954.1| Methionine tRNA ligase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 704

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 9/79 (11%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+++ H     A           + I +H GF+ + G KMSKS G FI      
Sbjct: 306 VHFIGKDILYFHTLFWPAMLE-GSGYRSPSKIHVH-GFIGVNGEKMSKSRGTFI------ 357

Query: 293 ETKKFGGRSWPAPVIRLAM 311
              K   +   A  +R  +
Sbjct: 358 -KAKTFAKFLDAEHLRFYL 375


>gi|42520297|ref|NP_966212.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
 gi|81652677|sp|Q73HW7|SYI_WOLPM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|42410035|gb|AAS14146.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           melanogaster]
          Length = 1111

 Score = 37.9 bits (87), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      E   N   H   L+++G+K+SK   N+    E+ +        + +  +R  M
Sbjct: 620 STALFNREPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDR-------YGSDALRFLM 672

Query: 312 LMT 314
           L  
Sbjct: 673 LSG 675


>gi|330444625|ref|YP_004377611.1| leucyl-tRNA synthetase [Chlamydophila pecorum E58]
 gi|328807735|gb|AEB41908.1| leucyl-tRNA synthetase [Chlamydophila pecorum E58]
          Length = 820

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 26/119 (21%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPID----FTVQ 325
           + +   KMSKS  N +    L+E        + A  +R  AM       P+D    ++ Q
Sbjct: 595 VLVRQEKMSKSKLNGVDPQTLIE-------EYGADALRMYAMFSG----PLDKNKLWSNQ 643

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
            +      L+++ +  TS  + D        +D      +   +KL    T++ + L +
Sbjct: 644 GVAGCRRFLNRFFELVTSSKVQDV-------DD---QQGLALAYKLVHRVTEDIEKLSL 692


>gi|323135807|ref|ZP_08070890.1| isoleucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
 gi|322398898|gb|EFY01417.1| isoleucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
          Length = 1007

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +GRKMSKS GN +   +++           A ++RL +
Sbjct: 651 SCGTRGRAPYDAVLTHGFVLDEKGRKMSKSLGNVVAPQKVIADSG-------ADILRLWV 703

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +    + L     L  K   T
Sbjct: 704 AASDYADDLRVGPEILKTFVELYRKLRNT 732


>gi|302336827|ref|YP_003802033.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
 gi|301634012|gb|ADK79439.1| leucyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
          Length = 806

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 38/137 (27%), Gaps = 16/137 (11%)

Query: 20  AIDPSNIRMYVCGPTVYDFA---HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
              P   R+YV     Y  +   H+G+       D+  R LR       V +        
Sbjct: 32  PAIPPEKRVYVLDMFPYPSSQGLHVGHPEGYTATDIYCRYLRMNGYN--VLHPMGFDSFG 89

Query: 77  DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
                 A      I         T  N   F     RL       +  +T+ I +     
Sbjct: 90  LPAENYA------IKTGTHPKATTESNIDMFRSQIKRLGFSYDWDREISTHKI-EYYRWT 142

Query: 137 Q----NIILHGHAYEAN 149
           Q     +   G AYE+ 
Sbjct: 143 QWIFLQLFKKGLAYESQ 159


>gi|298369585|ref|ZP_06980902.1| leucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
 gi|298282142|gb|EFI23630.1| leucine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
          Length = 878

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 48/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKW----PQTSTSKGIIDP--------------------AVLSALYND------LNTVSA 364
            +      +     G +                      A  + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGGAVKAFAGSQDGLSKELKDLRHKLHATTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 774


>gi|262373343|ref|ZP_06066622.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
 gi|262313368|gb|EEY94453.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
          Length = 685

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    +      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPSGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|50083984|ref|YP_045494.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
 gi|68565979|sp|Q6FE36|SYM_ACIAD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|49529960|emb|CAG67672.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
          Length = 685

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A+    +      NGFL + G+KMSKS G FI     L 
Sbjct: 289 HFIGKDIVYFHALFWPAMLEGANYRTPSGL--FVNGFLTVNGQKMSKSRGTFIKAETYL- 345

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
                 +      +R     
Sbjct: 346 ------QHLNPEYLRYYFAS 359


>gi|328793797|ref|XP_001122215.2| PREDICTED: isoleucyl-tRNA synthetase, mitochondrial-like [Apis
           mellifera]
          Length = 964

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S         + I++H   ++    KMSKS GN I   E+L+      ++  +   V+R 
Sbjct: 612 SIALQECPSYSAIFVHGFAVDENCLKMSKSIGNVINPEEILQGGSNLEKNPIYGVDVLRW 671

Query: 310 AMLMT 314
            +   
Sbjct: 672 WVANH 676


>gi|118089314|ref|XP_426247.2| PREDICTED: hypothetical protein [Gallus gallus]
          Length = 572

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A  +     I++H+ +  + G+KMSKS GN I               +     R  +L
Sbjct: 303 AAGLSPPERIFVHSHW-TVRGQKMSKSLGNVI-------DPFACNERYTVDGFRYFLL 352


>gi|93006420|ref|YP_580857.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
 gi|122989863|sp|Q1QAD0|SYM_PSYCK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|92394098|gb|ABE75373.1| methionyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
          Length = 700

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 15/83 (18%)

Query: 234 HGGGLDLIFPHH---ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H  G D+++ H       +A S         A+     GFL + G KMSKS G FI    
Sbjct: 300 HFIGKDIVYFHALFWPAMLAGSELRTPTGVFAH-----GFLMVNGEKMSKSRGTFI---- 350

Query: 291 LLETKKFGGRSWPAPVIRLAMLM 313
                           +R     
Sbjct: 351 ---KADTYAEHLHPEYLRYYFAS 370


>gi|261822387|ref|YP_003260493.1| leucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
 gi|261606400|gb|ACX88886.1| leucyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
          Length = 860

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F     P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEQPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T  N          L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIDYMKNQLKLLG 116


>gi|126667556|ref|ZP_01738526.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17]
 gi|126627982|gb|EAZ98609.1| Methionyl-tRNA synthetase [Marinobacter sp. ELB17]
          Length = 679

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 8/56 (14%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
                   +W H GF+ + G+KMSKS G FI     L+             +R   
Sbjct: 315 TGFRTPTAVWAH-GFVTVNGKKMSKSRGTFIMARTYLD-------FLNPEYLRYYF 362


>gi|114797776|ref|YP_759576.1| isoleucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
 gi|114737950|gb|ABI76075.1| isoleucyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
          Length = 1013

 Score = 37.9 bits (87), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 7/109 (6%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D      ++ + +SC    +     +  H   ++ +G+KMSKS GN I  +  
Sbjct: 624 DVYMEGSDQHRGWFQSSLLESCATRGMAPYKKVVTHGMVVDADGKKMSKSIGNTIEPDAF 683

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
            +            ++R+      Y +    + + +        K   T
Sbjct: 684 QKQHGI-------EILRIWTASADYWDDTRISDEIIKGTVETYRKLRNT 725


>gi|302671790|ref|YP_003831750.1| glutaminyl-tRNA synthetase GlnS [Butyrivibrio proteoclasticus B316]
 gi|302396263|gb|ADL35168.1| glutaminyl-tRNA synthetase GlnS [Butyrivibrio proteoclasticus B316]
          Length = 568

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 44/156 (28%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    F HIG+A+ ++   + Y + + Y G+  + +       DD    + + E     I
Sbjct: 46  PEPNGFLHIGHAKSIL---LNYGMAKEYGGKFNMRF-------DDTNPTKEKAEFMDSII 95

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
            D   +      + F                 A+++  +M      +I  G AY      
Sbjct: 96  ADVKWLGADYEDRLFH----------------ASDYFDEMYEDAVKLIKKGKAYV----- 134

Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
                        S    DE +       +  K++P
Sbjct: 135 -------------SELTADEMREYRGTLTEPGKEDP 157


>gi|269115082|ref|YP_003302845.1| Lmp related protein [Mycoplasma hominis]
 gi|268322707|emb|CAX37442.1| Lmp related protein [Mycoplasma hominis ATCC 23114]
          Length = 408

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 15/114 (13%)

Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
           + ++   Q L EA+  L     T  +K +       AL N+ N  + I  + ++ +    
Sbjct: 179 KQLNKEQQNLVEAKNTLENLIATEDAKTVGIGEAKKALDNNKN--NKISTIEEIKKAIND 236

Query: 378 NHDLLPIFNASAHILGIEVCKEHL-------NKNISIAIEK-LVQERLILLKMK 423
            +D+    N       IE  K+ L        +++   I K L + R I +K K
Sbjct: 237 LNDITNKLNQK-----IENKKQELLENFKKSKQDLEEYINKNLNEIRFIEVKEK 285


>gi|241563452|ref|XP_002401710.1| valyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215501902|gb|EEC11396.1| valyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 684

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 16/113 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I ++          NI + +G+ L  +  KMSKS GN +   
Sbjct: 408 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWENI-MVSGWCLAEDRSKMSKSKGNVLVPE 466

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 467 KLLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNAAK 512


>gi|191638284|ref|YP_001987450.1| isoleucyl-tRNA synthetase [Lactobacillus casei BL23]
 gi|254782413|sp|B3WDZ1|SYI_LACCB RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|190712586|emb|CAQ66592.1| Isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase) (IleRS)
           [Lactobacillus casei BL23]
          Length = 928

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  +     I      L+ +GRKMSKS GN I    +        + + A +IRL +
Sbjct: 568 SVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATI-------EKQFGAEIIRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---- 363
                   +  +V    +      K   T      + G  DP   +  Y++L +V     
Sbjct: 621 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMM 680

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             +  + K  + +   +D   +    +  L  ++   +L+    +  IE 
Sbjct: 681 VRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEA 730


>gi|119511990|ref|ZP_01631086.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
 gi|119463341|gb|EAW44282.1| isoleucyl-tRNA synthetase [Nodularia spumigena CCY9414]
          Length = 958

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 48/141 (34%), Gaps = 20/141 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   + I     +  H   L+ +GRKMSKS GN +    ++   K   +   + A ++RL
Sbjct: 587 SVAVNGIAPYKTVLTHGFVLDEQGRKMSKSVGNVVDPQIVINGGKDQKKEPPYGADILRL 646

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
                 Y   +      + +   +  K   T+         +L +L +            
Sbjct: 647 WASSVDYSSDVRLGGTIIKQMNDVRGKIRNTAR-------FLLGSLDD-----------F 688

Query: 370 KLARESTKNHDLLPIFNASAH 390
              +++    DL  +     H
Sbjct: 689 DPVKDAVPLSDLPELDRYMLH 709


>gi|116494771|ref|YP_806505.1| isoleucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
 gi|122263811|sp|Q039Q9|SYI_LACC3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|116104921|gb|ABJ70063.1| Isoleucyl-tRNA synthetase [Lactobacillus casei ATCC 334]
          Length = 928

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  +     I      L+ +GRKMSKS GN I    +        + + A +IRL +
Sbjct: 568 SVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATI-------EKQFGAEIIRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---- 363
                   +  +V    +      K   T      + G  DP   +  Y++L +V     
Sbjct: 621 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMM 680

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             +  + K  + +   +D   +    +  L  ++   +L+    +  IE 
Sbjct: 681 VRLNQIIKQVKTAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEA 730


>gi|240102754|ref|YP_002959063.1| arginyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239910308|gb|ACS33199.1| Arginyl-tRNA synthetase (argS) [Thermococcus gammatolerans EJ3]
          Length = 640

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  ++ D + R++R    +     V+N   IDD  ++ A+     + + +   
Sbjct: 136 PLHMGHARNAVLGDTMARIMRRLGYKVE---VQNY--IDDLGVQFAQVLWGYLNMKEEFE 190

Query: 98  II-TSKNTQQFVKDT 111
            I      +   +D 
Sbjct: 191 RIEAELREKGLKEDF 205


>gi|229017891|ref|ZP_04174773.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
 gi|228743404|gb|EEL93522.1| Lysyl-tRNA synthetase [Bacillus cereus AH1273]
          Length = 517

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCAAGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIN--DAISIITSKNTQQFVKDTTRLACL 117
             R +    D   E+          N     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFEKYIGMPYCDIPNPYGCHNSYAEHFEKEFEKSLQTFGIE 120


>gi|242012833|ref|XP_002427131.1| isoleucyl-tRNA synthetase, putative [Pediculus humanus corporis]
 gi|212511402|gb|EEB14393.1| isoleucyl-tRNA synthetase, putative [Pediculus humanus corporis]
          Length = 944

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 4/77 (5%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           I  H   ++  G+KMSKS GN +  + +L  K   G       +R  +
Sbjct: 592 SVAVGNGLPFDKILTHGFAVDENGKKMSKSVGNVVDPDTVLNGKNALGI----DTLRWWV 647

Query: 312 LMTHYREPIDFTVQRLT 328
               +   +  +   L 
Sbjct: 648 GSHSHNSLVPVSDSILK 664


>gi|315931152|gb|EFV10125.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 377

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   EG KMSKS GN +   E+++       ++ +   R  +L    +    DF+   
Sbjct: 34  HGWWTKEGEKMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENM 86

Query: 327 L 327
           L
Sbjct: 87  L 87


>gi|315928497|gb|EFV07803.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 399

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   EG KMSKS GN +   E+++       ++ +   R  +L    +    DF+   
Sbjct: 56  HGWWTKEGEKMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENM 108

Query: 327 L 327
           L
Sbjct: 109 L 109


>gi|315927701|gb|EFV07030.1| methionyl-tRNA synthetase, beta subunit [Campylobacter jejuni
           subsp. jejuni DFVF1099]
          Length = 380

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   EG KMSKS GN +   E+++       ++ +   R  +L    +    DF+   
Sbjct: 37  HGWWTKEGEKMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENM 89

Query: 327 L 327
           L
Sbjct: 90  L 90


>gi|254522917|ref|ZP_05134972.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
 gi|219720508|gb|EED39033.1| methionyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
          Length = 693

 Score = 37.9 bits (87), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                   A   +H NG+L ++G KMSKS G F+     L+             +R  
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDA------GLEPEALRYY 357


>gi|259046445|ref|ZP_05736846.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
 gi|259036861|gb|EEW38116.1| isoleucine--tRNA ligase [Granulicatella adiacens ATCC 49175]
          Length = 929

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 269 GFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           GF+   EG+KMSKS GN I+  + ++TK        A +IRL +    Y   +  + + L
Sbjct: 586 GFVMDGEGKKMSKSLGNVISPAKEMQTKG-------ADIIRLWVSSVDYESDVRISTEIL 638

Query: 328 TEAEILLSKWPQT 340
            +      K   T
Sbjct: 639 NQISEAYRKIRNT 651


>gi|190893972|ref|YP_001980514.1| leucyl-tRNA synthetase [Rhizobium etli CIAT 652]
 gi|238692504|sp|B3PS46|SYL_RHIE6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|190699251|gb|ACE93336.1| leucyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
          Length = 876

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A +       
Sbjct: 43  PYPSGRIHMGHVRNYAMGDVVARYKRARGYN--VLHPMGWDAFGMPAENAAMERGVH--- 97

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
               +  T +N          +       +  AT    +     +L  + +  G  Y   
Sbjct: 98  ---PASWTYQNIASMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFLDFLEKGLVYRKQ 154

Query: 150 NEIIFD 155
           +++ +D
Sbjct: 155 SKVNWD 160


>gi|164686335|ref|ZP_02210365.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
 gi|164601937|gb|EDQ95402.1| hypothetical protein CLOBAR_02773 [Clostridium bartlettii DSM
           16795]
          Length = 1037

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 35/83 (42%), Gaps = 10/83 (12%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ +++  L+  G+KMSKS GN +   EL +        + A  +R
Sbjct: 566 LAISTFVMGKAPYKNVLVNDLVLDKNGKKMSKSKGNTVDPFELFD-------KYGADALR 618

Query: 309 LAML--MTHYREPIDFTVQRLTE 329
             +L     +  PI F    L E
Sbjct: 619 WYLLYVSPPW-TPIRFDEAGLRE 640


>gi|329928481|ref|ZP_08282349.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328937740|gb|EGG34148.1| valine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 889

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 57/150 (38%), Gaps = 14/150 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           +  IH    + EGRKMSKS GN I   E++E        + A  +R
Sbjct: 506 IFQGLEFTGQMPFKDTLIHGLVRDSEGRKMSKSLGNGIDPLEVIE-------QYGADAMR 558

Query: 309 LAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTVS- 363
             +       + + F  +R+ +A    +K    S    +       A  +   +L T   
Sbjct: 559 YMISTGSTPGQDLRFRWERVEQARNFANKIWNASRFALMNLEGFTVADIDISGELGTADR 618

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHIL 392
             +  L++ +R+ T+  D    F  +  +L
Sbjct: 619 WILHRLNETSRDITRLIDAYE-FGETGRLL 647


>gi|296447938|ref|ZP_06889847.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296254575|gb|EFH01693.1| arginyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 592

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 57/129 (44%), Gaps = 22/129 (17%)

Query: 271 LNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE---PIDFTV- 324
           L   G   KMSK +G+F+T+ E+++             +R  ML   YR+   P++F + 
Sbjct: 397 LMRNGEPVKMSKRSGDFVTLREVVDEVGV-------DAVRFMML---YRKNDAPLEFDLA 446

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN--DLNTVSAIQALHKLARESTKNHDLL 382
           + + +++     + Q + ++     AV  AL    DL+   A  AL  +  E   +   +
Sbjct: 447 KVIEQSKDNPVFYVQYAHARA--KSAVRQALAAFPDLDVSPA--ALASVPLELLTDEGEI 502

Query: 383 PIFNASAHI 391
            +  A AH 
Sbjct: 503 ALAKAIAHF 511


>gi|254796895|ref|YP_003081732.1| isoleucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
 gi|254590131|gb|ACT69493.1| isoleucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
          Length = 1045

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    EL +        + A  +R  M
Sbjct: 576 SVALFDSVPFKNCLAHGVILDKDGKKLSKRLNNYKDPKELFD-------EYGADALRFLM 628

Query: 312 LMT 314
           L +
Sbjct: 629 LSS 631


>gi|227327380|ref|ZP_03831404.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum WPP14]
          Length = 860

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F     P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEQPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T  N          L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIDYMKNQLKLLG 116



 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 47/151 (31%), Gaps = 43/151 (28%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQR 326
           +     KMSKS  N I    ++E        + A  +RL M+      P    +++    
Sbjct: 613 VYAGMSKMSKSKNNGIDPQVMVE-------KYGADTVRLFMMFA---SPAEMTLEWQESG 662

Query: 327 LTEAEILLSK-WPQTS--TSKGIIDPAVLSALYND------------------------L 359
           +  A   L + W Q    T KG +    ++ L  D                         
Sbjct: 663 VEGANRFLKRVWRQAFEHTEKGAVTALDIATLTEDQKSLRRDLHKTIAKVTDDIGRRQTF 722

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           NT  AI A+ +L  +  K         A   
Sbjct: 723 NT--AIAAIMELMNKLAKAPQDSDQDRALTQ 751


>gi|241842777|ref|XP_002415428.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
 gi|215509640|gb|EEC19093.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
          Length = 522

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 49/131 (37%), Gaps = 23/131 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D H  G D++  H     A    A  +E   +I  H+ +  +   KMSKS GN +     
Sbjct: 261 DCHVIGKDILKFHGIYWPAFLIAA-GLEPPRSILCHSHW-TVNNEKMSKSKGNVLCP--- 315

Query: 292 LETKKFGGRSWPAPVIRLAMLM---THYREPIDFT---VQRLTEAE------ILLSKWPQ 339
                     + A  IR  +L     H     +F    VQRL  AE       LLS+   
Sbjct: 316 ----VKKVDKYTADGIRYFLLREGVPH--SDGNFNSVKVQRLLNAELADTLGNLLSRCTA 369

Query: 340 TSTSKGIIDPA 350
              +K  I PA
Sbjct: 370 PLVNKQQIFPA 380


>gi|209559678|ref|YP_002286150.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
 gi|209540879|gb|ACI61455.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes NZ131]
          Length = 918

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 555 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 607

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 608 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 648


>gi|94994746|ref|YP_602844.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
 gi|94548254|gb|ABF38300.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
          Length = 933

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|94990768|ref|YP_598868.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
 gi|94544276|gb|ABF34324.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
          Length = 933

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|71903844|ref|YP_280647.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
 gi|84029570|sp|Q48SL8|SYI_STRPM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71802939|gb|AAX72292.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
          Length = 933

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|50914610|ref|YP_060582.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
 gi|81822719|sp|Q5XB14|SYI_STRP6 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|50903684|gb|AAT87399.1| Isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
          Length = 933

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|50121444|ref|YP_050611.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
 gi|81644856|sp|Q6D474|SYR_ERWCT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|49611970|emb|CAG75419.1| arginyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
          Length = 576

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 41/127 (32%), Gaps = 16/127 (12%)

Query: 9   NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
           N L         ++P  I +    P V    H+G+ R  I+ D   R L +      +  
Sbjct: 98  NALNAPKLGLTPVEPQTIVIDYSAPNVAKEMHVGHLRSTIIGDAAARTLEFLG--HNIIR 155

Query: 69  VRNITDIDDK------IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
             ++ D   +       +E+ + E  +      +     +  + + +D            
Sbjct: 156 ANHVGDWGTQFGMLIAYLEKMQNESANEMDLSDLEAFYREAKKHYDED--------ADFA 207

Query: 123 PRATNHI 129
            RA  ++
Sbjct: 208 ERARGYV 214


>gi|323127710|gb|ADX25007.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis ATCC 12394]
          Length = 933

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|319406587|emb|CBI80229.1| Isoleucyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 971

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  GRKMSKS GN I   ++++T         A + RL +
Sbjct: 618 SCGTRTCSPYKTVVTHGFTLDENGRKMSKSLGNTIMPQDIIKTSG-------ADIFRLWV 670

Query: 312 LMTHYREPIDFTVQRL 327
           + T Y     +  QRL
Sbjct: 671 MTTDY-----WEDQRL 681


>gi|306827040|ref|ZP_07460338.1| isoleucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
 gi|304430786|gb|EFM33797.1| isoleucine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
          Length = 933

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|293374654|ref|ZP_06620969.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
 gi|292646744|gb|EFF64739.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
          Length = 655

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG A   +  D + R  R    +  V ++  + +   KI E+A++              
Sbjct: 20  HIGTAYTTVASDAMARYKRSRGFD--VHFLTGMDEHGQKIQEKAQEAGKEPQAYVDEIAD 77

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
            +K   + +  T            R T   H  +M+  I    + +G  Y+ + E ++ T
Sbjct: 78  AAKKLWEMMDITN-------DDFIRTTEKRH-EEMVEKIFAKFMENGDIYKGHYEGLYCT 129

Query: 157 SSIPNY 162
                Y
Sbjct: 130 PCESYY 135


>gi|302498706|ref|XP_003011350.1| hypothetical protein ARB_02409 [Arthroderma benhamiae CBS 112371]
 gi|291174900|gb|EFE30710.1| hypothetical protein ARB_02409 [Arthroderma benhamiae CBS 112371]
          Length = 707

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 39/119 (32%), Gaps = 26/119 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  +        L  Y+  K              +I R    +PS   
Sbjct: 208 PEPSGYLHIGHAKAAL--------LNDYFAHKQP---------GGTMICRFDDTNPSKEN 250

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
            +    I        + D   L    P     ++++   M  L   +I +G AY  N +
Sbjct: 251 AEFQDSI--------LHDLELLGI-TPDKVTYSSDYFDVMFDLCTKLISNGKAYADNTD 300


>gi|289765479|ref|ZP_06524857.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
 gi|289717034|gb|EFD81046.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 859

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 605 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSKWPQTSTSKGII----------------DPA-----------VLSALYND--LN 360
           A   L++  +       +                D A           V  A+ N+   N
Sbjct: 658 AYRFLTRVWRLVFENSELVKKSNDKIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFN 717

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 718 T--AIAANMELINEVQTYVASSMNSEQAAKILG 748


>gi|226325482|ref|ZP_03801000.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758]
 gi|225206225|gb|EEG88579.1| hypothetical protein COPCOM_03287 [Coprococcus comes ATCC 27758]
          Length = 731

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 78/196 (39%), Gaps = 28/196 (14%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              + IH    + +GRKMSKS GN I   E+
Sbjct: 327 DVLVTGYDIIFFWVIRMVFSGYAHTGKAPFHTVLIHGLVRDSQGRKMSKSLGNGIDPLEV 386

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +RL ++  +   P   + F  +R+  +    +K W  +      +
Sbjct: 387 ID-------EYGADALRLTLITGN--APGNDMRFYNERVESSRNFANKVWNASRFIMMNM 437

Query: 348 DPAVLSALYN-DLNTVSA--IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH---L 401
           +  V+S     D        +  ++ LA++ T+N D           LGI V K +    
Sbjct: 438 EDKVISKPDEADFEVTDKWILSKVNTLAKDVTENMDKFE--------LGIAVQKVYDFIW 489

Query: 402 NKNISIAIEKLVQERL 417
           ++     IE LV+ R+
Sbjct: 490 DEFCDWYIE-LVKYRI 504


>gi|139473464|ref|YP_001128180.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
 gi|134271711|emb|CAM29944.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
          Length = 933

 Score = 37.9 bits (87), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|327473395|gb|EGF18815.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK408]
          Length = 930

 Score = 37.9 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKHFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|313905014|ref|ZP_07838384.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
 gi|313470084|gb|EFR65416.1| valyl-tRNA synthetase [Eubacterium cellulosolvens 6]
          Length = 884

 Score = 37.9 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 44/197 (22%), Positives = 76/197 (38%), Gaps = 40/197 (20%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +             ++ IH    + +GRKMSKS GN I   E+
Sbjct: 482 DVLVTGYDIIFFWVIRMMFSGIEQTGKSPFHHVLIHGLVRDSQGRKMSKSLGNGIDPLEV 541

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST------ 342
           ++        + A  +RL ++  +   P   + F  +R+  +    +K    S       
Sbjct: 542 ID-------KYGADALRLTLMTGN--APGNDMRFYWERVEASRNFANKVWNASRFIMMNM 592

Query: 343 SKGIIDPAVLSALYNDLNTVSA-----IQALHKLARESTKNHDLLPIFNASAHILGIEVC 397
               I  +V      D+ T+ A     +  +++LA++ T+N D           LGI V 
Sbjct: 593 EGKEIPESV------DVQTLPAPSKWILHKVNELAKDVTENMDKYE--------LGIAVQ 638

Query: 398 KEH---LNKNISIAIEK 411
           K H    ++     IE 
Sbjct: 639 KVHDFIWDEFCDWFIEM 655


>gi|289641290|ref|ZP_06473456.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
           Datisca glomerata]
 gi|289508888|gb|EFD29821.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
           Datisca glomerata]
          Length = 879

 Score = 37.9 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N  I    L+ + +KMSKS GN +T  +LLE          +  +R   
Sbjct: 585 SHAEFGTLPWTNTAISGWILDPDRKKMSKSKGNVVTPLDLLEQHG-------SDAVRYWA 637

Query: 312 LMT 314
              
Sbjct: 638 ASG 640


>gi|227114423|ref|ZP_03828079.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           brasiliensis PBR1692]
          Length = 860

 Score = 37.9 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F     P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEQPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T  N          L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIDYMKNQLKLLG 116



 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 30/151 (19%), Positives = 47/151 (31%), Gaps = 43/151 (28%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQR 326
           +     KMSKS  N I    ++E        + A  +RL M+      P    +++    
Sbjct: 613 VYAGMSKMSKSKNNGIDPQVMVE-------KYGADTVRLFMMFA---SPAEMTLEWQESG 662

Query: 327 LTEAEILLSK-WPQTS--TSKGIIDPAVLSALYND------------------------L 359
           +  A   L + W Q    T KG +    ++ L  D                         
Sbjct: 663 VEGANRFLKRVWRQAFEHTEKGAVTALDIATLTEDQKSLRRDLHKTIAKVTDDIGRRQTF 722

Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAH 390
           NT  AI A+ +L  +  K         A   
Sbjct: 723 NT--AIAAIMELMNKLAKAPQDSDQDRALTQ 751


>gi|19746464|ref|NP_607600.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
 gi|81632618|sp|Q8P068|SYI_STRP8 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|19748668|gb|AAL98099.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes
           MGAS8232]
          Length = 933

 Score = 37.9 bits (87), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|331092376|ref|ZP_08341202.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
 gi|330401400|gb|EGG80986.1| valyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
          Length = 882

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              ++IH    + +GRKMSKS GN I   E+
Sbjct: 480 DVLVTGYDIIFFWVIRMVFSGFAHTGKSPFHTVFIHGLVRDSQGRKMSKSLGNGIDPLEI 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMT 314
           +E        + A  +R+ ++  
Sbjct: 540 IE-------QYGADALRMTLVTG 555


>gi|326924254|ref|XP_003208345.1| PREDICTED: methionyl-tRNA synthetase, mitochondrial-like, partial
           [Meleagris gallopavo]
          Length = 569

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           A  +     I++H+ +  + G+KMSKS GN I               +     R  +L
Sbjct: 300 AAGLSPPERIFVHSHW-TVRGQKMSKSLGNVI-------DPFVCNERYTVDGFRYFLL 349


>gi|294506941|ref|YP_003570999.1| leucyl-tRNA synthetase [Salinibacter ruber M8]
 gi|294343269|emb|CBH24047.1| leucyl-tRNA synthetase [Salinibacter ruber M8]
          Length = 863

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 59/161 (36%), Gaps = 40/161 (24%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPID----FTVQ 325
           ++    KMSKS GN I  +++++        + A  +RL  M M     P++    ++  
Sbjct: 629 VDARSHKMSKSRGNVINPDDVVD-------EYGADTLRLYEMFMG----PLEQDKPWSTD 677

Query: 326 RLTEAEILLSKWPQ---------TSTSKGIIDPAVLSAL------------YNDLNTVSA 364
            +      L++  +          + S    D   L  L              D NT  A
Sbjct: 678 DMEGVHRFLNRIWRLVVDADSGGLAVSDEEPDREQLRTLHRTIKKVTEDIEARDFNT--A 735

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
           I A+ +    + K  D LP   A+  +L +     HL + +
Sbjct: 736 IAAMMEFVNAANK-WDALPRQVATPFVLLLSPFAPHLAEEL 775


>gi|154685959|ref|YP_001421120.1| isoleucyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
 gi|154351810|gb|ABS73889.1| IleS [Bacillus amyloliquefaciens FZB42]
          Length = 921

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +           +  H   L+ EGRKMSKS GN +   +++       +   A ++RL +
Sbjct: 569 AVAVTGKAPYKGVLSHGFALDGEGRKMSKSIGNVVVPAKVM-------KQLGADILRLWV 621

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y+  +  +   L +   +  K   T
Sbjct: 622 SSVDYQADVRVSDAILKQVAEVYRKVRNT 650


>gi|77164486|ref|YP_343011.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|254433423|ref|ZP_05046931.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27]
 gi|123594665|sp|Q3JCG5|SYM_NITOC RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|76882800|gb|ABA57481.1| methionyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
 gi|207089756|gb|EDZ67027.1| methionyl-tRNA synthetase [Nitrosococcus oceani AFC27]
          Length = 674

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A     TA I+ H GFL + G+KMSKS G FI     L 
Sbjct: 287 HFIGKDILYFHALFWPAMLHGAGFRLPTA-IFAH-GFLTVNGQKMSKSRGTFIKARTYL- 343

Query: 294 TKKFGGRSWPAPVIRLAM 311
                 +      +R   
Sbjct: 344 ------KHLNPEYLRYYF 355


>gi|313902248|ref|ZP_07835654.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
 gi|313467478|gb|EFR62986.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
          Length = 689

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 53/145 (36%), Gaps = 17/145 (11%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              R Y+  P  Y  D  HIG+    +  D L R  R    E   T++   TD   + IE
Sbjct: 22  GRGRFYITTPIYYPNDRLHIGHTYTTVAADALARYHRLRGDE---TWLLTGTDEHGQKIE 78

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQ 137
           RA ++    P+     I+ +       +   RL           +PR    + Q+    Q
Sbjct: 79  RAARQAGKEPLEYIDPIVEAT-----RQLWQRLHISYDDFIRTTEPRHKARVQQIF---Q 130

Query: 138 NIILHGHAYEANNEIIFDTSSIPNY 162
            +   G  Y+   E ++ T+    Y
Sbjct: 131 RLYDKGDIYKGVYEGLYCTACEAYY 155


>gi|269219680|ref|ZP_06163534.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
 gi|269210922|gb|EEZ77262.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
          Length = 894

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 28/172 (16%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D+   G D+I     + + ++          +  I    L+ + +KMSKS GN +T  
Sbjct: 561 PMDVRPQGQDIIRTWLFSSMVRAHLEFGENPWKHAAISGWILDPDRKKMSKSKGNVVTPM 620

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ-------------RLTEAEILLSK 336
            LLE          +  +R        R  +D T                L  ++  LS 
Sbjct: 621 ALLEKHG-------SDAVRYWAASA--RLGVDATFDEQQMKIGRRLAMKVLNASKFALS- 670

Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
                 +   +D A ++   +     + +  L  +  E+T + D      A 
Sbjct: 671 -MGGEGAPADVDVAAVTEPAD----RAVLAGLADVVDEATASFDAYDHTRAL 717


>gi|270284697|ref|ZP_05966509.2| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
 gi|270276344|gb|EFA22198.1| arginine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
          Length = 631

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 62/337 (18%), Positives = 107/337 (31%), Gaps = 67/337 (19%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN-----ITDIDDKIIERARQEH 87
           PT     HIG  R   V D + R+L     +    Y  N     I      ++  A +E 
Sbjct: 170 PT--GPIHIGGTRWAAVGDSMARVLEANGAKVIREYYFNDHGEQINRFAKSLVAAAHEET 227

Query: 88  PSI--PINDAISIITSKNTQQFVKD-TTRLACLAPTH------QP--------------R 124
             +       I  I  +   +   D    L             +P              R
Sbjct: 228 TPVDGYKGAYIDEIARRVIAEANADGVDILNLPRVDGGTDEHGEPLGEGDSEQREEFRKR 287

Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
           A   +P M   IQ  + +   +  N ++ F  +S+   G    + I + +    + EK  
Sbjct: 288 A---VPMMFDEIQQSMKN---FRVNFDVWFHENSLYEDGEV-DKAIADLRARGDIFEKDG 340

Query: 185 KK--------NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
                     +  D ++ K S      + +     R   H E  +          D HG 
Sbjct: 341 ATWFASTKHGDDKDRVIIK-SDGNYAYFAADVAYYRNKRHREEGSADVAIYMLGADHHG- 398

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF---LNLEGR--KMSKSNGNFITINEL 291
                   +   +   C A   E   ++ I  G    +  +G+  +MSK  GN +TI++L
Sbjct: 399 --------YIGRMMAMCAAYGDEPGQHMQILIGQLVNVMKDGKPVRMSKRAGNIVTIDDL 450

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
           ++              R ++  T Y  P+D  +  L 
Sbjct: 451 VDAIGVDAS-------RYSLARTDYNSPVDIDLDLLA 480


>gi|190575365|ref|YP_001973210.1| methionyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
 gi|226710936|sp|B2FPT0|SYM_STRMK RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|190013287|emb|CAQ46921.1| putative methionyl-tRNA synthetase [Stenotrophomonas maltophilia
           K279a]
          Length = 692

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 7/58 (12%)

Query: 254 CADRIEKTANIWIH-NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                   A   +H NG+L ++G KMSKS G F+     L+             +R  
Sbjct: 306 VLHGTGHRAPTRLHVNGYLTVDGAKMSKSRGTFVMARTFLDA------GLEPEALRYY 357


>gi|167948225|ref|ZP_02535299.1| leucyl-tRNA synthetase [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 168

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 44/153 (28%), Gaps = 15/153 (9%)

Query: 13  RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           RK +   + DP+  + Y      Y     H+G+ R   + DV+ R  R     K V    
Sbjct: 20  RKKSFTVSEDPAKEKFYCLSMFPYPSGKLHMGHVRNYTIGDVIARYQRMQG--KNVLQPM 77

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                       AR+         A +  T  N         RL       +  AT    
Sbjct: 78  GWDAFGLPAENAARKNRA------APAAWTYDNIDYMKGQLKRLGFGYDWDRELATCKPD 131

Query: 131 ----QMIYLIQNIILHGHAYEANNEIIFDTSSI 159
               +     + +   G  Y  N  + +D    
Sbjct: 132 YYKWEQWLFTE-LYKKGLVYRKNAVVNWDQGRF 163


>gi|56808754|ref|ZP_00366471.1| COG0060: Isoleucyl-tRNA synthetase [Streptococcus pyogenes M49 591]
          Length = 822

 Score = 37.5 bits (86), Expect = 4.0,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|332187695|ref|ZP_08389430.1| leucyl-tRNA synthetase [Sphingomonas sp. S17]
 gi|332012261|gb|EGI54331.1| leucyl-tRNA synthetase [Sphingomonas sp. S17]
          Length = 833

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 40/125 (32%), Gaps = 35/125 (28%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEA- 330
            KMSKS  N +    +++        + A  +R  ML      P    + ++   +  + 
Sbjct: 609 EKMSKSKKNTVDPEPIVD-------QYGADAVRWFMLS---DSPPERDLPWSESGIEGSW 658

Query: 331 --EILLSKWPQTSTSKGIIDPAV--------------LSALYNDLNTVSAIQALHKLARE 374
                L +    S +    D A+              + AL    N   A+  L++L   
Sbjct: 659 RFVQRLWRLFDGSEAAEGEDKALSRKLHQTIAGVAADIEALA--FN--KAVAKLYELVNA 714

Query: 375 STKNH 379
             K  
Sbjct: 715 IEKAK 719


>gi|329766498|ref|ZP_08258042.1| valyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137097|gb|EGG41389.1| valyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 773

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 32/90 (35%), Gaps = 16/90 (17%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                 +  +  W+    L+ +G KMSKS GN I    ++E        + A   R    
Sbjct: 507 EQLTGKKPWSEAWVMGYGLDEKGMKMSKSKGNAIDPLPVIE-------QFGADTFRFWSA 559

Query: 313 M---THYREPIDF--TVQRLTEAEILLSKW 337
                 Y    DF    Q++   +  LSK 
Sbjct: 560 SEINHGY----DFRCNEQKIESTKKFLSKL 585


>gi|317131331|ref|YP_004090645.1| leucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469310|gb|ADU25914.1| leucyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 800

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 51/152 (33%), Gaps = 29/152 (19%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYR 317
           E       H   L   G KMSKS GN +  +E++       +++ A  +RL  M +  + 
Sbjct: 561 EPYQKRTSHGMILGENGEKMSKSRGNVVNPDEMV-------KAYGADTLRLYEMFIGDFE 613

Query: 318 EPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAV--------------LSALYNDLN 360
           +   ++   +  ++  L +     +         P +              + ++    N
Sbjct: 614 KAAPWSDTGIRGSKRFLERVWNLQEKLLPGDGYRPELESDLHKTIKKVTGDIESM--KFN 671

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
           T  AI AL  L     K       +     +L
Sbjct: 672 T--AIAALMTLLNRFAKEGASRGEWRTFLLLL 701


>gi|256027519|ref|ZP_05441353.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
          Length = 872

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 51/153 (33%), Gaps = 39/153 (25%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E+L+        + A   RL ++      + +++    L  
Sbjct: 618 LQVKVEKMSKSKNNGVDPEEMLD-------KYGADTTRLFIMFAAPPEKELEWNENGLAG 670

Query: 330 AEILLSKWPQTSTSKGII----------------DPA-----------VLSALYND--LN 360
           A   L++  +       +                D A           V  A+ N+   N
Sbjct: 671 AYRFLTRVWRLVFENSELVKKSNDKIDYNKLSKEDKALLIKLNQTIKKVTDAIENNYHFN 730

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
           T  AI A  +L  E             +A ILG
Sbjct: 731 T--AIAANMELINEVQTYVASSMNSEQAAKILG 761


>gi|212223653|ref|YP_002306889.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
 gi|212008610|gb|ACJ15992.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
          Length = 642

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 5/65 (7%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  ++ D + R++R          V+N   IDD  ++ A+     + + +   
Sbjct: 138 PLHMGHARNAVLGDTMARIMRALGYNVE---VQNY--IDDLGVQFAQVLWGYLNLKEEFE 192

Query: 98  IITSK 102
            + ++
Sbjct: 193 RLEAE 197


>gi|119505636|ref|ZP_01627707.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
 gi|119458579|gb|EAW39683.1| methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
          Length = 547

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A    A     TA I+ H GFL ++G KMSKS G FI  +  L 
Sbjct: 290 HFIGKDIINFHGLFWPAMLQAAGLRLPTA-IYAH-GFLTVDGTKMSKSRGTFIHASAYL- 346

Query: 294 TKKFGGRSWPAPVIRLAM 311
                 +      +R   
Sbjct: 347 ------KHLDPEYLRYYF 358


>gi|37499738|gb|AAQ91887.1| valyl-tRNA synthetase [Anaplasma phagocytophilum]
          Length = 412

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 15/111 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IA S          +I I    +  +  KMSKS  N    +ELL+T       + A  IR
Sbjct: 120 IAMSHLHRAELPWKSIMISGWCVAEDKTKMSKSKNNAKDPSELLKT-------YGADAIR 172

Query: 309 LAMLMTHYREPID--FTVQRLTEAEILLSKWPQT----STSKGIIDPAVLS 353
                +  R  +D  F+ + +   + L++K            G I P+  +
Sbjct: 173 YW--ASKARNGVDTVFSEEVIKTGKRLVTKLYNAHKFVQLVAGNIKPSFEA 221


>gi|71906184|ref|YP_283771.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
 gi|71845805|gb|AAZ45301.1| leucyl-tRNA synthetase [Dechloromonas aromatica RCB]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 38/144 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    L++        + A   RL ++  +   + ++++   +  A   L
Sbjct: 634 EKMSKSKNNGVDPQALID-------QYGADTARLFIMFASPPDQSLEWSDAGVEGAYRFL 686

Query: 335 SKWPQT-------------------STSKGIIDPAVLSAL---YND------LNTVSAIQ 366
            +  +T                   S+++  +   +   +    +D       NT  AI 
Sbjct: 687 RRLWKTTYDHLQAGLVAASTSNDGLSSAQADLRRKLHQTMGKVADDYGRRKQFNT--AIA 744

Query: 367 ALHKLARESTKNHDLLPIFNASAH 390
           A+ +L     K         A A 
Sbjct: 745 AVMELLNAYDKCDLKDAAGRALAQ 768


>gi|21910702|ref|NP_664970.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28895608|ref|NP_801958.1| isoleucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
 gi|81759061|sp|Q8K6S2|SYI_STRP3 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|21904905|gb|AAM79773.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
 gi|28810857|dbj|BAC63791.1| putative isoleucyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
          Length = 933

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|325694115|gb|EGD36033.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK150]
          Length = 930

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|325133228|gb|EGC55897.1| methionyl-tRNA synthetase [Neisseria meningitidis M6190]
 gi|325139263|gb|EGC61807.1| methionyl-tRNA synthetase [Neisseria meningitidis ES14902]
          Length = 684

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 71/194 (36%), Gaps = 19/194 (9%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A             ++ H GFL ++G+KMSKS G FIT    LE
Sbjct: 298 HFIGKDILYFHALFWPAMLH-FSGHRAPTGVYAH-GFLTVDGQKMSKSRGTFITAKSYLE 355

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQ-TSTSKGII 347
                 +      +R  +        I+     L +    ++     K+    + + G I
Sbjct: 356 ------QGLNPEWMRYYI-AAKLNSKIEDIDLNLQDFISRVNSDLVGKYVNIAARASGFI 408

Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNIS 406
                S L +  ++   +  L   +    + ++      A   I+ + ++  E+++ N  
Sbjct: 409 AKRFESRLKDVADSAL-LAKLTAQSEAIAECYESREYAKALRDIMALADIVNEYVDANKP 467

Query: 407 IAIEKLVQERLILL 420
             + K  QE     
Sbjct: 468 WELAK--QEGQDAR 479


>gi|320592228|gb|EFX04667.1| methionyl-tRNA synthetase [Grosmannia clavigera kw1407]
          Length = 630

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   M++ DVL R          +      T  D+      + +  +     
Sbjct: 56  VNSDPHVGHMYSMVLADVLKRWQTLQGRRALLC-----TGTDEH---GMKVQQAATRAGV 107

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
           A      +N   F  D  R A LA     R T  +H+  +  + + +   G+ Y+  ++ 
Sbjct: 108 APKQFCDENAAVF-ADLARRAQLANDFFIRTTDSDHVAAVRAIWRRLRRRGYVYQTKHQG 166

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 167 WYCVSDETFY 176


>gi|302335806|ref|YP_003801013.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301319646|gb|ADK68133.1| leucyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 854

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 44/138 (31%), Gaps = 17/138 (12%)

Query: 22  DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DP+  + YV    P      H+G+AR   + D + R  R    +  V +           
Sbjct: 38  DPAKPKRYVLEMFPYPSGDLHMGHARNYTIGDAMARQARMRGFD--VLHPMGFDAFGLPA 95

Query: 80  IERARQEHP----SIPINDAISIITSKNTQQFVKDTTRL-ACLAPTHQPRATNHIPQMIY 134
              A + H         N A ++ T +    F  D  R+     P +             
Sbjct: 96  ENAAIKHHTQASRWTHQNIAQTVKTMRRMG-FSYDYDRMFNTCDPEYYRW------GQWM 148

Query: 135 LIQNIILHGHAYEANNEI 152
            I  +   G AY A + +
Sbjct: 149 FI-KMWERGLAYRATSPV 165


>gi|294676411|ref|YP_003577026.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
 gi|294475231|gb|ADE84619.1| arginyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
          Length = 581

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 54/347 (15%), Positives = 98/347 (28%), Gaps = 83/347 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+ R  +  D L  LL +   +    Y  N       ++ R+  E      
Sbjct: 133 PT--GPMHVGHTRGAVFGDALASLLDFAGYDVTREYYINDGGAQVDVLARSAYERYREAN 190

Query: 93  N------------------------------------DAISIITSKNTQQF----VKDTT 112
                                                D ++ +    T+       +D  
Sbjct: 191 GLEPEIREGLYPGDYLIPVGEALKEKYGASLIDKPESDWLAEVRVFATEAMMAMIREDLA 250

Query: 113 RLACLAPTHQPRATNHIPQMIYL-IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
            L           + +    I   +Q +   G  YE    +      +P       + + 
Sbjct: 251 LLGVKMDVFYSEKSLYGTGQIEAALQRLQDLGLIYE--GVLEPPKGKLPEDWEEREQTLF 308

Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
                    ++  KK+          T   P     W +   G              ++ 
Sbjct: 309 RSTSYGDDVDRPVKKSDG------AWTYFAPDIAYHWTKIERG------------FDQLI 350

Query: 232 DI----HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNF 285
           D+    HGG +  +      + A +  ++         I    L   G   KMSK  G F
Sbjct: 351 DVFGADHGGYVKRM------KAAVAALSENRVPLDIKLIQLVKLFKNGEPFKMSKRAGTF 404

Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR-LTEAE 331
           +T+ +++E    G       V R  ML      P+DF   + L +++
Sbjct: 405 VTLRDVVEQAGAG-------VTRFHMLTRKNDAPLDFDFDKVLEQSK 444


>gi|294141350|ref|YP_003557328.1| methionyl-tRNA synthetase [Shewanella violacea DSS12]
 gi|293327819|dbj|BAJ02550.1| methionyl-tRNA synthetase [Shewanella violacea DSS12]
          Length = 694

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 11/98 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A    A   + T +++ H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIINFHSLFWPAMLEGAGYRKPT-HVYAH-GYVTVNGAKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLAMLM--THYREPIDFTVQRLTE 329
                  +     +R       +H  + +D  ++   +
Sbjct: 349 -------NLDPEYLRYYYAAKLSHRIDDLDLNLEDFAQ 379


>gi|260774879|ref|ZP_05883780.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609134|gb|EEX35292.1| leucyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 857

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/184 (14%), Positives = 55/184 (29%), Gaps = 18/184 (9%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
            T   + DP+  + Y      Y     H+G+ R   + DV+ R  R           +N+
Sbjct: 22  KTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVSRFQRLQG--------KNV 73

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
                        E+ ++  N A +  T +N +        L      ++  AT    + 
Sbjct: 74  MQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKMLGLGYDWNREFATCTPEYY 133

Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
                    +   G  Y+  + +              +  ++ + +          K+ P
Sbjct: 134 RWEQEFFTKLYEKGLVYKKMSTVNWDPVDQT----VLANEQVVDGRGWRSGAIVEQKEIP 189

Query: 189 ADFI 192
             FI
Sbjct: 190 QWFI 193


>gi|251782905|ref|YP_002997208.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242391535|dbj|BAH81994.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 933

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|213019556|ref|ZP_03335362.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|212994978|gb|EEB55620.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 1054

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      E   N   H   L+++G+K+SK   N+    E+ +        + +  +R  M
Sbjct: 585 STALFDSEPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFD-------KYGSDALRFLM 637

Query: 312 LMT 314
           L  
Sbjct: 638 LSG 640


>gi|190571034|ref|YP_001975392.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|190357306|emb|CAQ54735.1| isoleucyl-trna synthetase [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
          Length = 1056

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      E   N   H   L+++G+K+SK   N+    E+ +        + +  +R  M
Sbjct: 587 STALFDSEPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFD-------KYGSDALRFLM 639

Query: 312 LMT 314
           L  
Sbjct: 640 LSG 642


>gi|296242288|ref|YP_003649775.1| Isoleucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
 gi|296094872|gb|ADG90823.1| Isoleucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
          Length = 1057

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 13/84 (15%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
              +    N+ +H   L+ +GR+M KS GN++  +E +              +RL +L  
Sbjct: 576 GFDLAPYKNVLVHGFMLDEQGREMHKSLGNYVGTDEAIAKAGRDP-------LRLWLLS- 627

Query: 315 HYREPID---FTVQRLTEAEILLS 335
                 +   F+ + + E    LS
Sbjct: 628 --NTTWEDAKFSWKSIEEVARDLS 649


>gi|288553838|ref|YP_003425773.1| leucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
 gi|288544998|gb|ADC48881.1| leucyl-tRNA synthetase [Bacillus pseudofirmus OF4]
          Length = 807

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 37/114 (32%), Gaps = 14/114 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSC------CADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
             DI+ GG +    H                    E    ++     L     KMSKS G
Sbjct: 524 PVDIYIGGAEHAVLHLLYARFWHKFLYDLGVVPTKEPFQKLYNQGMILGENNEKMSKSKG 583

Query: 284 NFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSK 336
           N +  ++++ +         A  +RL  M M      I ++   L  A   L +
Sbjct: 584 NVVNPDDIVLSHG-------ADTLRLYEMFMGPLDASIAWSTNGLDGARRFLDR 630


>gi|253687581|ref|YP_003016771.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|259511548|sp|C6DBW8|SYL_PECCP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|251754159|gb|ACT12235.1| leucyl-tRNA synthetase [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 860

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 30/106 (28%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F     P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEQPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T  N          L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIDYMKNQLKLLG 116


>gi|238060978|ref|ZP_04605687.1| valyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
 gi|237882789|gb|EEP71617.1| valyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
          Length = 881

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 58/168 (34%), Gaps = 17/168 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +     +    +  +    L+ + +KM+KS GN +T   LLE        + +  +R   
Sbjct: 588 AHAEHGVLPWRDTVLSGWILDPDRKKMAKSKGNVVTPIALLE-------QYGSDAVRYWA 640

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALY-NDLNTVSAIQALH 369
                   + F   ++     L +K    S  + G+     L A     L+T   +  L 
Sbjct: 641 ASGRPGMDLAFDPAQIRVGRRLATKLLNASRFALGLGAADALRAPATEPLDTAM-LAELS 699

Query: 370 KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
            +   +T        F    H   ++  +    +     IE LV+ER 
Sbjct: 700 GVVAAAT------AAFEGYDHTGALQAAESFFWRFCDDYIE-LVKERA 740


>gi|260817050|ref|XP_002603400.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
 gi|229288719|gb|EEN59411.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
          Length = 531

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 54/137 (39%), Gaps = 25/137 (18%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D H  G D++  H     A    A  ++   ++  H+ +L +E +KMSKS GN +   + 
Sbjct: 253 DCHVVGKDIVRFHAVYWPAFLMAA-GLDPPRSVVTHSHWL-MESQKMSKSKGNVVDPFD- 309

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPI----DFTVQRLTEAEIL---------LSKWP 338
                   + + A  +R  +L       +    D++ +++ +             L++  
Sbjct: 310 ------RIQRYSADGLRYFLLKHG---VLEADGDYSDEKVVKVLNADLAGNIGGLLNRCL 360

Query: 339 QTSTSKGIIDPAVLSAL 355
            TS +     PA  + +
Sbjct: 361 ATSLNPTQTFPAFSANM 377


>gi|189083241|sp|Q47IN0|SYL_DECAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 870

 Score = 37.5 bits (86), Expect = 4.1,   Method: Composition-based stats.
 Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 38/144 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    L++        + A   RL ++  +   + ++++   +  A   L
Sbjct: 628 EKMSKSKNNGVDPQALID-------QYGADTARLFIMFASPPDQSLEWSDAGVEGAYRFL 680

Query: 335 SKWPQT-------------------STSKGIIDPAVLSAL---YND------LNTVSAIQ 366
            +  +T                   S+++  +   +   +    +D       NT  AI 
Sbjct: 681 RRLWKTTYDHLQAGLVAASTSNDGLSSAQADLRRKLHQTMGKVADDYGRRKQFNT--AIA 738

Query: 367 ALHKLARESTKNHDLLPIFNASAH 390
           A+ +L     K         A A 
Sbjct: 739 AVMELLNAYDKCDLKDAAGRALAQ 762


>gi|227494721|ref|ZP_03925037.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436]
 gi|226831721|gb|EEH64104.1| methionine--tRNA ligase [Actinomyces coleocanis DSM 15436]
          Length = 564

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 49/149 (32%), Gaps = 37/149 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY-REPIDFTV-- 324
           + FL +EGRK + S G  I + ++L         + A  +R  +          DFT   
Sbjct: 302 SEFLTMEGRKFASSRGIVIYVRDMLSR-------YQADALRYFISAAGPESSDADFTWAE 354

Query: 325 -------QRLTEAEILLSKWPQ----------TSTSKGIIDPAVLSALYNDLNTVS---- 363
                  + +     L+++                    ID A+L+ L +    V     
Sbjct: 355 FVRRTNSELVAGWGNLVNRAASMINKRFGEIPQPGQLEEIDQALLNQLADGFAEVGQLIG 414

Query: 364 ------AIQALHKLARESTKNHDLLPIFN 386
                 AI A+ +L  E+ K       F 
Sbjct: 415 THRQKAAIAAVMRLVGEANKYVADTEPFK 443


>gi|237808288|ref|YP_002892728.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|259511563|sp|C4LEX5|SYM_TOLAT RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|237500549|gb|ACQ93142.1| methionyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 675

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A    K +NI++H G++ + G KMSKS G FI  +  L 
Sbjct: 291 HFIGKDIVYFHSLFWPAMLDGA-GFRKPSNIFVH-GYVTVNGAKMSKSRGTFIKASTYL- 347

Query: 294 TKKFGGRSWPAPVIRLA 310
                 +      +R  
Sbjct: 348 ------QHLDPECLRYY 358


>gi|254479486|ref|ZP_05092810.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
           12653]
 gi|214034571|gb|EEB75321.1| conserved hypothetical protein [Carboxydibrachium pacificum DSM
           12653]
          Length = 401

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 45/115 (39%), Gaps = 6/115 (5%)

Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-ESTKNHDLLPIFNASA 389
           E  L K  + +       P    AL  +L          +LA  + T +  +      S 
Sbjct: 105 EGDLEKLSKIADILLEEPPDYKRALKENLGKGLTFAKARELALVKVTGDESISKTLQTSN 164

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLIL----LKMKKFSSADYIRKQLESKGF 440
           +ILGIE  K  L K  S  +   ++ R  L        +F+SA  IRK ++ KG 
Sbjct: 165 NILGIEYLK-ALKKIKSSIVPFTIKRRGALYTSLKLEGEFASATSIRKAIKEKGI 218


>gi|167042619|gb|ABZ07341.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_ANIW133K13]
          Length = 1066

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 15/71 (21%)

Query: 263 NIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE--- 318
           N ++  G +  E G KMSKS GN I  +ELL        ++PA ++R   +   ++    
Sbjct: 584 NSFLFQGHVLDEKGNKMSKSTGNVIDASELLN-------NYPADLVRFYFM---WKSSPI 633

Query: 319 -PIDFTVQRLT 328
             ++F+ + L 
Sbjct: 634 ETLNFSTKELM 644


>gi|289621749|emb|CBI51660.1| unnamed protein product [Sordaria macrospora]
          Length = 613

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 44/130 (33%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+   M++ DVL R  +    +  +      TD     ++RA   +       
Sbjct: 73  VNASPHVGHMYSMVLADVLKRWQKLKGNQAIL---CTGTDEHGTKVQRAAMSNDM----- 124

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
                   N+ +F +              R T  +H+  + +    +   G  YEA +E 
Sbjct: 125 DPKQFCDLNSAKFQELAAACLIDH-DRFIRTTDQDHVEAVKHFWLLLKDKGLIYEAKHEG 183

Query: 153 IFDTSSIPNY 162
            +  S    Y
Sbjct: 184 WYCVSDECFY 193


>gi|255027361|ref|ZP_05299347.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
          Length = 39

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMT 455
           AD IR  L+ K  ILED       +   
Sbjct: 1   ADEIRDILKEKNIILEDTAQGTRFRTGV 28


>gi|149201526|ref|ZP_01878500.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
 gi|149144574|gb|EDM32603.1| leucyl-tRNA synthetase [Roseovarius sp. TM1035]
          Length = 895

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 37/140 (26%), Gaps = 13/140 (9%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
            D +  + YV    P      H+G+ R   + DV+ R          V +          
Sbjct: 27  RDETRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARY--KIATGHNVLHPMGWDAFGMP 84

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYL 135
               A                T  N          L       +  AT    +  Q   L
Sbjct: 85  AENAAMASGGH------PKDWTYANIADMRAQMKPLGLSIDWSREFATCDPEYYGQQQAL 138

Query: 136 IQNIILHGHAYEANNEIIFD 155
             + + HG  Y  N  + +D
Sbjct: 139 FLDFLEHGLVYRKNAVVNWD 158


>gi|148555761|ref|YP_001263343.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
 gi|189083151|sp|A5VA89|SYL_SPHWW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|148500951|gb|ABQ69205.1| leucyl-tRNA synthetase [Sphingomonas wittichii RW1]
          Length = 835

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 35/123 (28%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++E        + A  +R  ML      P    +++T   +    
Sbjct: 611 EKMSKSKKNVVDPAPIVE-------QYGADAVRWFMLS---DSPPERDLEWTESGIEGCW 660

Query: 332 ILLSKWPQTSTSKGIID-----------------PAVLSALYNDLNTVSAIQALHKLARE 374
             +++  + +      D                  A + AL    N   A+  +H+L+  
Sbjct: 661 RFVNRLWRITDVSEAGDGEDRELDRKLHKAIAGIAADIEALG--FN--RAVAKIHELSNA 716

Query: 375 STK 377
             K
Sbjct: 717 IEK 719


>gi|153956357|ref|YP_001397122.1| methionyl-tRNA synthetase [Clostridium kluyveri DSM 555]
 gi|219856672|ref|YP_002473794.1| hypothetical protein CKR_3329 [Clostridium kluyveri NBRC 12016]
 gi|146349215|gb|EDK35751.1| MetS [Clostridium kluyveri DSM 555]
 gi|219570396|dbj|BAH08380.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 644

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 56/185 (30%), Gaps = 52/185 (28%)

Query: 233 IHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           +H  G D L F  H         A   E    ++ H G+L ++G KMSKS GN +     
Sbjct: 256 VHLVGKDILRF--HTIYWPIMLMALGEEIPEKVFGH-GWLLVDGGKMSKSKGNVV----- 307

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------ 339
                     +    +R  +L       I F    L   EI + K               
Sbjct: 308 --DPVVLVNHFGTDAVRYYLLR-----EIPFGADGLFNNEIFIKKINSDLANDLGNLLSR 360

Query: 340 --------------TSTSKGIIDPAVLS-ALY---------NDLNTVSAIQALHKLARES 375
                             K  ID  ++  AL          N L    A+ ++ +L   +
Sbjct: 361 TCTMIEKYFDGIMPAPKEKEDIDDELIGLALDIPIKIEKHMNHLRIPEALDSIWELVSRT 420

Query: 376 TKNHD 380
            K  D
Sbjct: 421 NKYID 425


>gi|30018309|ref|NP_829940.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|229125556|ref|ZP_04254589.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
 gi|38258299|sp|Q81JA8|SYM1_BACCR RecName: Full=Methionyl-tRNA synthetase 1; AltName:
           Full=Methionine--tRNA ligase 1; Short=MetRS 1
 gi|29893849|gb|AAP07141.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
 gi|228657873|gb|EEL13678.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
          Length = 660

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 14/116 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R       V Y+    +   KI ++A +      +N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRMQGYN--VHYLTGTDEHGQKIQKKAEE------LNITPQAY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
                    +   ++         R T    +   +++ I           +I  D
Sbjct: 74  VDNIVAGIKELWEKMNISYDDF-IRTTE--DRHKDVVEKIFKQ---LVDQGDIYLD 123


>gi|332298066|ref|YP_004439988.1| leucyl-tRNA synthetase [Treponema brennaborense DSM 12168]
 gi|332181169|gb|AEE16857.1| leucyl-tRNA synthetase [Treponema brennaborense DSM 12168]
          Length = 887

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 31/114 (27%), Gaps = 13/114 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D+  R LR       V +              A      I      +  
Sbjct: 52  HVGHPEGYTATDIYCRYLRMNGYN--VLHPMGYDAFGLPAENYA------IKTGTHPAAT 103

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEAN 149
           T+ N + F +    L           +   P   +  Q     +   G AYEA 
Sbjct: 104 TNANIEHFTQQIKALGFSY-DWDRCVSTCTPDYYHWTQWIFLQLYKKGLAYEAE 156


>gi|299119289|gb|ADJ11447.1| GA17300 [Drosophila miranda]
 gi|299119291|gb|ADJ11448.1| GA17300 [Drosophila miranda]
 gi|299119295|gb|ADJ11450.1| GA17300 [Drosophila miranda]
 gi|299119303|gb|ADJ11454.1| GA17300 [Drosophila miranda]
 gi|299119309|gb|ADJ11457.1| GA17300 [Drosophila miranda]
 gi|299119311|gb|ADJ11458.1| GA17300 [Drosophila miranda]
          Length = 134

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 47/141 (33%), Gaps = 37/141 (26%)

Query: 239 DLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           DLI  H      N  A         K       NG L L   KMSKS+GNF+T+ + +E 
Sbjct: 2   DLINNHLTFTLYNHAAIW--PKDDTKWPKGMRVNGHLLLNSAKMSKSDGNFLTLTDAVEK 59

Query: 295 KKFGGRS-------------------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
               G                       A ++RL          I++  + L E +  L 
Sbjct: 60  FSADGMRLCLADAGDSIEDANFVVSTADAGILRLFTF-------IEWVKEML-ETKSTLR 111

Query: 336 KWPQTSTSKGIIDPAVLSALY 356
           K      +K   D   LS L 
Sbjct: 112 K----GAAKTFNDQVFLSELN 128


>gi|317131750|ref|YP_004091064.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
 gi|315469729|gb|ADU26333.1| arginyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
          Length = 564

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 56/323 (17%), Positives = 95/323 (29%), Gaps = 52/323 (16%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE----------- 81
           PT     H+GNAR   + D L  +L +   +    +  N  D  ++I +           
Sbjct: 138 PT--GPMHMGNARGGALGDCLAAVLEHAGYDVTREFYVN--DAGNQIAKFAVSLEARYFQ 193

Query: 82  --RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
             R     P          +  +  ++F     +    AP  + R       +   ++ +
Sbjct: 194 IFRGEDAVPFPEDGYHGDDVRER-AKEFAAQYGKQYLDAPEDERRKVLAAFGIERNVKKL 252

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
                 Y    ++ F  S +   G  +    D   +       Y K    D  LW  +T 
Sbjct: 253 HDDLLKYRIEYDVWFRESVLHEDGELA----DVIALLKERGAAYEK----DGALWYAATR 304

Query: 200 MEPGWESPW--GRGRPGWHIECSA-----MSSHYLGKVFDIHGGGLDLIFPHHENEI--- 249
                +       G P +     A            KV D+ G        HH +     
Sbjct: 305 FGAEKDEVLVRANGIPTYFAADIAYHRNKFEKRGFAKVVDVWGAD------HHGHVARLK 358

Query: 250 -AQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRSWPAPV 306
            A        +K   +      L   G   +MSK  G  I++++LLE         P   
Sbjct: 359 GAMDAIGVGGDKLDVVLTQLVRLMRGGEVVRMSKRTGKAISLDDLLE-------EVPVDA 411

Query: 307 IRLAMLMTHYREPIDFTVQRLTE 329
            R    +      +DF +    E
Sbjct: 412 ARFFFNLREANSHLDFDLDLAVE 434


>gi|254520447|ref|ZP_05132503.1| isoleucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226914196|gb|EEH99397.1| isoleucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 1036

 Score = 37.5 bits (86), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 6/84 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+ +G KMSKS GN +   E+L+ +      W      
Sbjct: 562 LAISTAIFDTNPFENCIVLGHVLDKKGLKMSKSKGNVVDPFEVLDAQGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEI 332
                  +  P  F++  + EA+ 
Sbjct: 617 FYTASAPW-LPTRFSIDDVAEAQR 639


>gi|71065987|ref|YP_264714.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4]
 gi|123748115|sp|Q4FRS8|SYM_PSYA2 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|71038972|gb|AAZ19280.1| methionyl-tRNA synthetase [Psychrobacter arcticus 273-4]
          Length = 700

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 27/83 (32%), Gaps = 15/83 (18%)

Query: 234 HGGGLDLIFPHH---ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           H  G D+++ H       +A S         A+     GFL + G KMSKS G FI    
Sbjct: 300 HFIGKDIVYFHALFWPAMLAGSELRTPTAVFAH-----GFLMVNGEKMSKSRGTFI---- 350

Query: 291 LLETKKFGGRSWPAPVIRLAMLM 313
                           +R     
Sbjct: 351 ---KADTYAEHLHPEYLRYYFAS 370


>gi|255513907|gb|EET90172.1| glutamyl-tRNA synthetase class Ic [Candidatus Micrarchaeum
           acidiphilum ARMAN-2]
          Length = 577

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 29/126 (23%)

Query: 21  IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
           ++ S +  Y   P    + HIGNA+  I+ D   ++    Y  K   Y       DD   
Sbjct: 98  VEGSVVTRYPPEPG--GYMHIGNAKQCILSDEFAKI----YNGKIFLY------WDDTNP 145

Query: 81  ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
           E+ +QE                  +    D   L     + +  A+++I  M    + +I
Sbjct: 146 EKCKQE----------------YVEAMKSDLDWLGIK-FSREYFASDYIETMYSKGEELI 188

Query: 141 LHGHAY 146
           L G+AY
Sbjct: 189 LSGNAY 194


>gi|153810152|ref|ZP_01962820.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174]
 gi|149833331|gb|EDM88412.1| hypothetical protein RUMOBE_00533 [Ruminococcus obeum ATCC 29174]
          Length = 584

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
            ++   L   +     + ++  P +  ++Q +   G AYE    ++ D     +
Sbjct: 250 KRNYANLNV-SFDLWKKESDAQPYIPDMVQKMKDQGFAYEDQGALVVDVKEESD 302


>gi|126640612|ref|YP_001083596.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
 gi|126386496|gb|ABO10994.1| leucyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
          Length = 238

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 51/153 (33%), Gaps = 43/153 (28%)

Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSK 336
           MSKS  N I    +++        + A   R+ M+      + ++++   +  A   L +
Sbjct: 1   MSKSKNNGIDPQAIID-------QYGADTARVFMMFAAPPDQSLEWSDAGVEGANRFLKR 53

Query: 337 -------WPQTSTSKGIIDPAVLSALYND---------------------LNTVSAIQAL 368
                  + +   S   ID A LS    D                      NT  AI AL
Sbjct: 54  VWRLVASFLEKGNSATAIDKANLSKDAQDLRRKTHETIQKVSDDIERRHAFNT--AIAAL 111

Query: 369 HKLARESTK-----NHDLLPIFNASAHILGIEV 396
            +L   S K     ++D+     A   +L +  
Sbjct: 112 MELLNASNKFEAKDDNDVAVEREAITTLLTLLA 144


>gi|159037752|ref|YP_001537005.1| methionine--tRNA ligase [Salinispora arenicola CNS-205]
 gi|157916587|gb|ABV98014.1| Methionine--tRNA ligase [Salinispora arenicola CNS-205]
          Length = 536

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS 89
          PT     H+G+ A P +  DV  R LR     + V Y     D    ++  AR++   
Sbjct: 16 PTPNGDLHLGHLAGPYLAADVYARHLRMSG--RPVVYTTCTDDSQSYVLTTARRQGVP 71


>gi|99034168|ref|ZP_01314255.1| hypothetical protein Wendoof_01000951 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
          Length = 439

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      E   N   H   L+++G+K+SK   N+    E+ +        + +  +R  M
Sbjct: 154 STALFNREPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDR-------YGSDALRFLM 206

Query: 312 LMT 314
           L  
Sbjct: 207 LSG 209


>gi|88607102|ref|YP_505755.1| valyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
 gi|88598165|gb|ABD43635.1| valyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
          Length = 806

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 15/111 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IA S          +I I    +  +  KMSKS  N    +ELL+T       + A  IR
Sbjct: 514 IAMSHLHRAELPWKSIMISGWCVAEDKTKMSKSKNNAKDPSELLKT-------YGADAIR 566

Query: 309 LAMLMTHYREPID--FTVQRLTEAEILLSKWPQT----STSKGIIDPAVLS 353
                +  R  +D  F+ + +   + L++K            G I P+  +
Sbjct: 567 YW--ASKARNGVDTVFSEEVIKTGKRLVTKLYNAHKFVQLVAGNIKPSFEA 615


>gi|157828905|ref|YP_001495147.1| valyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933628|ref|YP_001650417.1| valyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
 gi|166225531|sp|A8GTB4|SYV_RICRS RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|189083632|sp|B0BUV1|SYV_RICRO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|157801386|gb|ABV76639.1| valyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908715|gb|ABY73011.1| valyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
          Length = 812

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 40/112 (35%), Gaps = 14/112 (12%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           +DL    HE         I ++          NI I    L  +  KMSKS GN +   +
Sbjct: 490 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWKNIMISGWCLAEDRSKMSKSKGNVLVPEK 549

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 550 LLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWSAAK 594


>gi|269216160|ref|ZP_06160014.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
 gi|269130419|gb|EEZ61497.1| leucine--tRNA ligase [Slackia exigua ATCC 700122]
          Length = 859

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 62/190 (32%), Gaps = 49/190 (25%)

Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYR 317
           E  +N+      L+  G  MSKS GN I   +++        S+ A  +R   + M    
Sbjct: 587 EPFSNLLCQGMVLDEHGDVMSKSKGNVIAPEDMIA-------SYGADAVRAYILFMAPPD 639

Query: 318 EPIDFTVQRLTEAEILLSK----------------WPQTSTSKGII--DPA--------- 350
           + + +    L      L++                  Q    KG    D A         
Sbjct: 640 KELLWNEDGLAGLSKFLNRAWRIVFDLKREGGDDSLFQADPGKGAPRSDAARAKLLRERH 699

Query: 351 -VLSALYND-----LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
            V + + +D      NT  AI A+ +L   ++    +    +  +            + +
Sbjct: 700 RVAAKVADDFGRNAFNT--AIAAIMELVNAASDYLRVTGADDRVSD------EAASFDAD 751

Query: 405 ISIAIEKLVQ 414
           ++  I KL+ 
Sbjct: 752 MAETIVKLLA 761


>gi|260779289|ref|ZP_05888181.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260605453|gb|EEX31748.1| methionyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 712

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N+++H G++ + G KMSKS G FI     L 
Sbjct: 317 HFIGKDIVYFHSLFWPAMLE-GSGFRKPNNVFVH-GYVTVNGAKMSKSKGTFIKAATYLN 374

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                        +R       Y   ++    R+ + ++ L  + Q   + 
Sbjct: 375 -------HLDPECLRYY-----YAAKLN---SRIDDLDLNLEDFIQRVNAD 410


>gi|196008044|ref|XP_002113888.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
 gi|190584292|gb|EDV24362.1| hypothetical protein TRIADDRAFT_26821 [Trichoplax adhaerens]
          Length = 850

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++   RKMSKS GN +  +E +   K       A V+RL +  + Y   +  +   
Sbjct: 623 HGFVMDENNRKMSKSLGNIVYPDEAITGTKKKV-GLGADVLRLWVAASGYAADLSCSNSI 681

Query: 327 LTEAEILLSKWPQTST 342
           L      L K   ++ 
Sbjct: 682 LERFGESLRKVRNSAR 697


>gi|158335466|ref|YP_001516638.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
 gi|158305707|gb|ABW27324.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
          Length = 532

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 9/85 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H     A    AD       ++ H GFL  +G+KM KS GN +   
Sbjct: 259 PINLHLIGKDILRFHAVYWPAMLMSADLPLP-DRVFGH-GFLTKDGQKMGKSLGNTLDPV 316

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT 314
           EL++        +    +R   L  
Sbjct: 317 ELVDR-------YGTDAVRYYFLKA 334


>gi|84515044|ref|ZP_01002407.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
 gi|84511203|gb|EAQ07657.1| leucyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
          Length = 843

 Score = 37.5 bits (86), Expect = 4.3,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 26/128 (20%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +  +++L         + A   R  +L      P    +++T        
Sbjct: 614 AKMSKSKKNVVDPDDILA-------QYGADTARWFVLS---DSPPERDVEWTASGADATY 663

Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIF 385
             L++  + ++       A  +   +DL     ++A+H+   + T   +       +   
Sbjct: 664 KHLARVYRIASEIAAAPDATGTG-DDDL-----LRAMHRCIHDVTMGLETFGFNAAIAKL 717

Query: 386 NASAHILG 393
            A  + LG
Sbjct: 718 YAFTNTLG 725


>gi|332366079|gb|EGJ43835.1| isoleucine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 930

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S     +     I      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVANHGVAPYKQILSQGFALDGKGEKMSKSLGNTIAPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDSSNDVRISMDILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|239948481|ref|ZP_04700234.1| valyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239922757|gb|EER22781.1| valyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 495

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 16/113 (14%)

Query: 238 LDLIFPHHE-------NEIAQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSNGNFITIN 289
           +DL    HE         I ++          NI + +G+ L  +  KMSKS GN +   
Sbjct: 173 MDLRPQAHEIIRTWAFYTILKAHLHQNTLPWENI-MVSGWCLAEDRSKMSKSKGNVLVPE 231

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +LLE        + + VIR     +       ++   +   + L++K    + 
Sbjct: 232 KLLE-------QYGSDVIRYWSANSKLGADTAYSEDVMKNGKRLVNKLWNAAK 277


>gi|32171525|sp|Q898V2|SYL_CLOTE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 812

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ ++        + + V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTISPDDYID-------EFGSDVFRMYLMFGFDYTEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQTSTS 343
           + +      + +  +T  S
Sbjct: 614 EGIKSVSRFVDRVERTLAS 632


>gi|322833894|ref|YP_004213921.1| leucyl-tRNA synthetase [Rahnella sp. Y9602]
 gi|321169095|gb|ADW74794.1| leucyl-tRNA synthetase [Rahnella sp. Y9602]
          Length = 894

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 32/106 (30%), Gaps = 11/106 (10%)

Query: 13  RKITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           ++   F     P   + Y      Y     H+G+ R   + DV+ R  R           
Sbjct: 19  QEKQTFKVTEQPGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG-------- 70

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           +N+             E  ++  N A +  T +N +        L 
Sbjct: 71  KNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYENIEYMKNQLKLLG 116


>gi|319403670|emb|CBI77255.1| Isoleucyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
          Length = 971

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G+KMSKS GN I   ++++T         A + RL +
Sbjct: 618 SCGTRACSPYKTVVTHGFTLDENGKKMSKSLGNTIMPQDIIKTSG-------ADIFRLWV 670

Query: 312 LMTHYREPIDFTVQRL 327
           + T Y     +  QRL
Sbjct: 671 MTTDY-----WEDQRL 681


>gi|296535500|ref|ZP_06897687.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
 gi|296264170|gb|EFH10608.1| valine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
          Length = 898

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 58/168 (34%), Gaps = 27/168 (16%)

Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
           Y  +  +     +     + +R+K+      TR  +       +   LW  ST     W 
Sbjct: 433 YAPDGSVFVA-RTEEEALAQARQKLGADVTLTRDEDVLDTWFSS--ALWPFSTLG---WP 486

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
           +             +A    Y     D+   G D+IF      +              ++
Sbjct: 487 NK------------TAELEKYYPG--DVLVTGWDIIFFWVARMMMMGIHFMGDVPFKTVY 532

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           IH    + +G+KMSKS GN I   EL++       S+ A  +R A+  
Sbjct: 533 IHGLVRDEKGQKMSKSKGNVIDPLELVD-------SFGADALRFAIAS 573


>gi|290992262|ref|XP_002678753.1| methionyl-tRNA synthetase [Naegleria gruberi]
 gi|284092367|gb|EFC46009.1| methionyl-tRNA synthetase [Naegleria gruberi]
          Length = 636

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           YV GP      HIG+    I+ D +Y   +       + +     +   K+   A +  P
Sbjct: 77  YVNGP-----PHIGHLFTTILSDSIYLYHKQLKNRHDMIFSTGTDEHGSKVQRTAIKNLP 131

Query: 89  S------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI--- 139
           +        IN +      K ++ F            TH  R T+   +    ++ +   
Sbjct: 132 NQNTLDDETINKSCVEFCEKISETFKTMMKDFNIQY-THYLR-TSATREHRETVERVWKE 189

Query: 140 -ILHGHAYEANNEIIFDTS 157
               G  Y    +  + T+
Sbjct: 190 LEKRGDIYLGEYQGWYCTT 208


>gi|241895048|ref|ZP_04782344.1| glutamyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
 gi|241871766|gb|EER75517.1| glutamyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
          Length = 498

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 54/311 (17%), Positives = 100/311 (32%), Gaps = 55/311 (17%)

Query: 23  PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK--CVTYVRNITDIDDKI 79
              IR+ Y   PT     HIGNAR  +   +  R  +  +  +       RNI D     
Sbjct: 6   EKKIRVRYAPSPT--GHLHIGNARTALFNWLFARHHKGEFIIRIEDTDQTRNIAD----- 58

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
            E+++ ++ +    D      +       + + RL+   P               LIQ++
Sbjct: 59  GEKSQLDNLAWLGLDWDESPANPGKYGPYRQSERLSIYKP---------------LIQDL 103

Query: 140 ILHGHAYE---------ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA- 189
           +  G AY          A  E        P+Y  +    + ++++     +   K  P  
Sbjct: 104 LDRGLAYRSFKTSEELAAEREAQVAAKEAPHY-VYEYADMSDEEIAAFQADAEAKGLPYV 162

Query: 190 ---------DFILWKRSTPMEPGWESPWGRGRPGWHIECS-AMSSHYLGKVFDIHGGGLD 239
                    D+  W      +    S    G   W I+ +  M ++    V D H   + 
Sbjct: 163 VRFRVPEDKDYA-WDDIVKGKISINSSTVGG--DWVIQKADGMPTYNFAVVVDDHMMEIS 219

Query: 240 LIFP---HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
            +     H  N   Q    +     A I+ H   + + G    K +    T+ + +E  +
Sbjct: 220 HVLRGDDHVSNTPKQLMIYEAFGWEAPIFGHMTLI-INGDTGKKLSKRDETVLQFIEQYR 278

Query: 297 FGGRSWPAPVI 307
             G  +    +
Sbjct: 279 SLG--YLPEAL 287


>gi|229027126|ref|ZP_04183424.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
 gi|228734176|gb|EEL84872.1| Lysyl-tRNA synthetase [Bacillus cereus AH1272]
          Length = 487

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 32/112 (28%), Gaps = 12/112 (10%)

Query: 17  EFQAIDPSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLL-------RYYYGEKCVT 67
           E     P+    +VC  G +     HIGN R ++    + R L       R+ +      
Sbjct: 10  ELIRKHPNKET-FVCAAGISPSGSVHIGNFREIVTTYFVVRALQDLGKKTRFIFSWDDYD 68

Query: 68  YVRNITDIDDKIIERARQEHPSIPIN--DAISIITSKNTQQFVKDTTRLACL 117
             R +    D   E+          N     +       ++F K        
Sbjct: 69  RFRKVPKNIDPSFEKYIGMPYCDIPNPYGCHNSYAEHFEKEFEKSLQTFGIE 120


>gi|257051293|ref|YP_003129126.1| valyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
 gi|256690056|gb|ACV10393.1| valyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
          Length = 905

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/107 (14%), Positives = 33/107 (30%), Gaps = 17/107 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRY--------YYGEKCVTYVRNITDIDDKIIERAR 84
           PTV    H+G+     + D + R  R         +  +        +T   ++ ++   
Sbjct: 65  PTVSGSLHMGHLYQFTLQDFVARFRRMTDDTVYFPFGYDDNGIASERLT---ERELDIRH 121

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP------THQPRA 125
            +       +    + +     F +D   LA          T +PR 
Sbjct: 122 SDFERREFQEKTRDVCADYEDAFTEDVQSLAISVDWDNTYKTIEPRV 168


>gi|303279394|ref|XP_003058990.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226460150|gb|EEH57445.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 1065

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 57/173 (32%), Gaps = 22/173 (12%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  E +A    +      +   G D++F      +  S           +++H    + 
Sbjct: 620 GWPDEDAADFKKFFPTQ--VMETGHDILFFWVARMVMMSYGMTNTLPFHTVYLHGLVRDE 677

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEI 332
           +GRKMSKS GN +    +++ +           +R  +   T   + ++  + RL     
Sbjct: 678 KGRKMSKSLGNVVDPLNVIDEQG-------CDALRFTLATGTAAGQDLNLNMDRLASNRN 730

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
             +K        G      L  + +D            L RE+    + L   
Sbjct: 731 FTNKIWNA----GKFLLYALEGMSDDDRVA--------LVREAETVPNDLASL 771


>gi|255279909|ref|ZP_05344464.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469]
 gi|255269682|gb|EET62887.1| arginine--tRNA ligase [Bryantella formatexigens DSM 14469]
          Length = 588

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 96  ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
              I   +     K+ +RL           ++  P +  ++Q +   G A+E    ++ D
Sbjct: 242 WQHIMRVSIADLKKNYSRLNVE-FDLWKGESDAQPYIPEMVQRMKDEGFAHEDQGALVVD 300

Query: 156 TSSIPN 161
                +
Sbjct: 301 VKEETD 306


>gi|224475632|ref|YP_002633238.1| methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
 gi|222420239|emb|CAL27053.1| Methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
           TM300]
          Length = 667

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 38/125 (30%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +     +    
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAHKAGVSELEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
             +          +L         R T   H   +  + + ++  G  Y    E  +   
Sbjct: 72  LDEMISGIKSLWEKLEISNDDF-IRTTEKRHEEVVAKVFERLLEQGDIYLGEYEGWYSVP 130

Query: 158 SIPNY 162
               Y
Sbjct: 131 DETYY 135


>gi|88608052|ref|YP_506420.1| isoleucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
 gi|88600221|gb|ABD45689.1| isoleucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
          Length = 1045

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    EL +        + A  +R  M
Sbjct: 576 SVALFDSVPFKNCLAHGVILDKDGKKLSKRLNNYKDPKELFD-------EYGADALRFLM 628

Query: 312 LMT 314
           L +
Sbjct: 629 LSS 631


>gi|33860796|ref|NP_892357.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
 gi|81576445|sp|Q7V352|SYI_PROMP RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|33633738|emb|CAE18697.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
           str. CCMP1986]
          Length = 965

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 2/93 (2%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS--WPAPVIRL 309
           S   +       +  H   L+  GRKMSKS GN +  N ++           + A V+RL
Sbjct: 598 SVAVNNKPPYKTVLTHGFALDENGRKMSKSLGNVVDPNIIINGGPNQKIQPAYGADVLRL 657

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
            +    Y   +      L +   +  K   T+ 
Sbjct: 658 WVSSVDYSVDVPIGSNILKQLSDVYRKVRNTAR 690


>gi|15893934|ref|NP_347283.1| leucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|32171578|sp|Q97LB6|SYL_CLOAB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|15023520|gb|AAK78623.1|AE007580_3 Leucyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
 gi|325508061|gb|ADZ19697.1| leucyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
          Length = 812

 Score = 37.5 bits (86), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 9/75 (12%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G+KMSKS GN I+ ++++           + V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGQKMSKSKGNTISPDDIIAEHG-------SDVFRMYLMFGFDYAEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQ 339
             +      + ++ +
Sbjct: 614 DGVKAMSKFVDRFSR 628


>gi|260753146|ref|YP_003226039.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|258552509|gb|ACV75455.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 941

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC +        +  H   L+  GRKMSKS GN I   +++           A ++R+ +
Sbjct: 605 SCGSRGHAPYEAVLTHGFTLDGTGRKMSKSVGNVIDPLKVINESG-------ADILRMWV 657

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y E +  + + L+       K   +
Sbjct: 658 ASTDYNEDVRISKEVLSGTSDGYRKLRNS 686


>gi|241760884|ref|ZP_04758973.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|241374503|gb|EER63964.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
           10988]
          Length = 941

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC +        +  H   L+  GRKMSKS GN I   +++           A ++R+ +
Sbjct: 605 SCGSRGHAPYEAVLTHGFTLDGTGRKMSKSVGNVIDPLKVINESG-------ADILRMWV 657

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y E +  + + L+       K   +
Sbjct: 658 ASTDYNEDVRISKEVLSGTSDGYRKLRNS 686


>gi|268679959|ref|YP_003304390.1| valyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
 gi|268617990|gb|ACZ12355.1| valyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 10/85 (11%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL--AMLMTHYR 317
              +I++H    +  G+KMSKS GN I   + +         + A  +R   A+L    R
Sbjct: 519 PFKDIYLHALVKDEHGQKMSKSKGNVIDPLDSIA-------EYSADTLRFTLAILAVQGR 571

Query: 318 EPIDFTVQRLTEAEILLSKWPQTST 342
             I  + ++L +     +K    S 
Sbjct: 572 -DIKLSSEKLEQIRNFTNKLYNASR 595


>gi|229552084|ref|ZP_04440809.1| isoleucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|258539500|ref|YP_003173999.1| isoleucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
 gi|229314517|gb|EEN80490.1| isoleucine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
 gi|257151176|emb|CAR90148.1| Isoleucyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
          Length = 928

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 17/170 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  I     I      L+ +GRKMSKS GN I  + +        + + A +IRL +
Sbjct: 568 SVAATGIAPYRGILSQGFTLDGKGRKMSKSLGNTIVPSTI-------EKQFGAEIIRLWV 620

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS---- 363
                   +  +V    +      K   T      + G  DP   +  Y+ L +V     
Sbjct: 621 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTLRFMVANTGDFDPEKDAVAYDQLGSVDRYLL 680

Query: 364 -AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEK 411
             +  +    +E+   +D   +    +  L  ++   +L+    +  IE 
Sbjct: 681 VRLNQVIAKVKEAYDAYDFATVEKTISSFLVNDLSAFYLDVAKDVVYIEA 730


>gi|228995127|ref|ZP_04154865.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
 gi|228764615|gb|EEM13426.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
          Length = 231

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 392 LGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADY--IRKQLESKGFILEDYKNP 448
            G E  +  L   +    I  L+  R   LK K    AD   +R+ L   G ++ D KN 
Sbjct: 161 FGSEYERWALGHTDFPEKINVLLYARDRALKEK--KKADAKYLREDLAQLGAVIRDEKNG 218

Query: 449 D 449
            
Sbjct: 219 Q 219


>gi|300361465|ref|ZP_07057642.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
 gi|300354084|gb|EFJ69955.1| isoleucine--tRNA ligase [Lactobacillus gasseri JV-V03]
          Length = 934

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 33/89 (37%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S           +      L+ +G KMSKS GN I+ N+++       +   A +IRL +
Sbjct: 576 SVAVTGKAPYKQVLSQGFVLDDKGHKMSKSLGNVISPNDVV-------KQMGAEIIRLWV 628

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
                   +  +   L ++     K   T
Sbjct: 629 AGADTTSDVAVSQDILRQSAESYRKIRNT 657


>gi|282600751|ref|ZP_05979667.2| valine--tRNA ligase [Subdoligranulum variabile DSM 15176]
 gi|282571616|gb|EFB77151.1| valine--tRNA ligase [Subdoligranulum variabile DSM 15176]
          Length = 926

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 70/178 (39%), Gaps = 33/178 (18%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     + IH    + +GRKMSKS GN I   E+++        + A  +R+ +++
Sbjct: 551 AYTGKAPFDTVLIHGIVRDSQGRKMSKSLGNGIDPLEVID-------QYGADALRMMLIV 603

Query: 314 TH-YREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVLSALYNDLNTV 362
                  + ++ +++T +    +K    +             G+ + ++L  + +     
Sbjct: 604 GSTAGNDMRYSDEKVTASRNFANKLWNAARFVLMNLPEDFQPGMPEESLLD-MSDK---- 658

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILG----------IEVCKEHLNKNISIAIE 410
             +  L K+  E+T N D   +  A+  +            IE+CK  LN + ++  +
Sbjct: 659 WVLSELAKVTAEATANLDKYELGLAAEKVENFIWEVYCDWYIEICKSRLNSDDAVQAD 716


>gi|187476981|ref|YP_785005.1| methionyl-tRNA synthetase [Bordetella avium 197N]
 gi|123752268|sp|Q2KYS4|SYM_BORA1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|115421567|emb|CAJ48077.1| methionyl-tRNA synthetase [Bordetella avium 197N]
          Length = 691

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 48/210 (22%), Positives = 76/210 (36%), Gaps = 34/210 (16%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +H  G D+I+ H     A    A R    A   +H GF+ + G KMSKS G  I+    L
Sbjct: 299 VHFIGKDIIYFHALFWPAMLKFAGRKTPDALN-VH-GFITVSGEKMSKSRGTGISPLRYL 356

Query: 293 ETKKFGGRSWPAPVIRLAM---LMTHYR-EPIDFTVQRLTEAEI--LLSKWPQ-TSTSKG 345
           E             +R  M   L    R E +DF  +         L+ K+    S +  
Sbjct: 357 EV------GMDPEWLRYYMAAKLNA--RVEDMDFNPEDFIARVNSDLVGKYVNIASRAAN 408

Query: 346 IIDPAV---LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
            I       L+ L +     +A+ A  + A+++      L     +  I  I    + +N
Sbjct: 409 FITRHFEGKLAYLGD----TAALSA--EFAQQTESIRAALEAREFNRAIREIMAYADGIN 462

Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIR 432
           +    A   ++         K F+ AD  R
Sbjct: 463 QAFDAAQPWVL--------AKGFAEADEAR 484


>gi|5932379|gb|AAD56932.1|AF180145_24 isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 941

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC +        +  H   L+  GRKMSKS GN I   +++           A ++R+ +
Sbjct: 605 SCGSRGHAPYEAVLTHGFTLDGTGRKMSKSVGNVIDPLKVINESG-------ADILRMWV 657

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y E +  + + L+       K   +
Sbjct: 658 ASTDYNEDVRISKEVLSGTSDGYRKLRNS 686


>gi|28210096|ref|NP_781040.1| leucyl-tRNA synthetase [Clostridium tetani E88]
 gi|28202532|gb|AAO34977.1| leucyl-tRNA synthetase [Clostridium tetani E88]
          Length = 828

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 36/79 (45%), Gaps = 9/79 (11%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ ++        + + V R+ ++    Y E   ++ 
Sbjct: 577 HQGLILGPDGLKMSKSKGNTISPDDYID-------EFGSDVFRMYLMFGFDYTEGGAWSD 629

Query: 325 QRLTEAEILLSKWPQTSTS 343
           + +      + +  +T  S
Sbjct: 630 EGIKSVSRFVDRVERTLAS 648


>gi|84494287|ref|ZP_00993406.1| valyl-tRNA synthetase [Janibacter sp. HTCC2649]
 gi|84383780|gb|EAP99660.1| valyl-tRNA synthetase [Janibacter sp. HTCC2649]
          Length = 895

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 7/59 (11%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  N  I    L+ + +KMSKS GN +T  ++L       +   A  +R      
Sbjct: 582 HGTVPWTNAAISGWILDPDRKKMSKSKGNVVTPEDVL-------KEHSADAVRYWAASG 633


>gi|328955608|ref|YP_004372941.1| Isoleucyl-tRNA synthetase [Coriobacterium glomerans PW2]
 gi|328455932|gb|AEB07126.1| Isoleucyl-tRNA synthetase [Coriobacterium glomerans PW2]
          Length = 934

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 22/183 (12%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKIIERARQE 86
           Y  GP      H+G+A   I  D++ R       +       +     I+ ++ E+   E
Sbjct: 60  YANGP-----IHMGHAMNKIGKDMINRYWMMRGRQVHFVPGWDCHGQPIEHRVEEKLGTE 114

Query: 87  HPSIPINDAISIITSKN----TQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNI 139
             +    + I  +  +      +       RL  LA    P  T    H    I + +++
Sbjct: 115 RFNRTPVERIRELCRRFAVENIEVQKAGFERLGVLADWDNPYLTLHHEHDAADIEVFKSL 174

Query: 140 ILHGHAYEANNEIIFD-------TSSIPNYGSF-SRRKIDEQKMGTRVPEKYHKKNPADF 191
              G  Y  +  + +          +   YG   S       ++            P DF
Sbjct: 175 FDQGMIYRGHKPVHWCKHCHTALAEAEIEYGDETSPSVYVRFELTDTPKGLEGFSGPVDF 234

Query: 192 ILW 194
           I+W
Sbjct: 235 IIW 237


>gi|295398665|ref|ZP_06808689.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
 gi|294973100|gb|EFG48903.1| isoleucine--tRNA ligase [Aerococcus viridans ATCC 11563]
          Length = 929

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 38/139 (27%), Gaps = 16/139 (11%)

Query: 32  GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER------A 83
           GP  Y     HIG+A   I  D++ R            YV         I +        
Sbjct: 61  GP-PYANGNIHIGHAMNKISKDIIIRSKSMSGFRSP--YVPGWDTHGLPIEQALTNSGVD 117

Query: 84  RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ----PRATNHIPQMIYLIQNI 139
           R+                K       D  RL   A   +      A     Q I L  ++
Sbjct: 118 RKSMTVAEFRKLCEEYAWKQINGQRDDFKRLGV-AGDWENPYLTLAPEFEAQQIRLFGDM 176

Query: 140 ILHGHAYEANNEIIFDTSS 158
              G  Y+    + +  SS
Sbjct: 177 YEKGLIYKGAKPVYWSPSS 195


>gi|182678510|ref|YP_001832656.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634393|gb|ACB95167.1| methionyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
           9039]
          Length = 530

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 45/149 (30%), Gaps = 17/149 (11%)

Query: 24  SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
              R Y+     Y     HIG+A   +  D + R  R    +  V +V  + +   K+ +
Sbjct: 17  GRPRFYLTTAIPYANGAPHIGHAYERLACDAITRFKRLDGYD--VLFVTGMDEHGQKMQQ 74

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQN 138
            A ++H           +  +   QF      L         R T    H+         
Sbjct: 75  TAARDH------ITPQELADRTAAQFAAMGLALDA-PTDDVVRTTEPRHHVAAQEIW-NR 126

Query: 139 IILHGHAYEANNEIIFDTS--SIPNYGSF 165
           +  +G  Y +     +     +  + G  
Sbjct: 127 MAANGDIYLSKYPGWYSVRDEAFFDEGEL 155


>gi|56551219|ref|YP_162058.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
 gi|81820925|sp|Q5NQQ7|SYI_ZYMMO RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|56542793|gb|AAV88947.1| isoleucyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
          Length = 941

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 36/89 (40%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC +        +  H   L+  GRKMSKS GN I   +++           A ++R+ +
Sbjct: 605 SCGSRGHAPYEAVLTHGFTLDGTGRKMSKSVGNVIDPLKVINESG-------ADILRMWV 657

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y E +  + + L+       K   +
Sbjct: 658 ASTDYNEDVRISKEVLSGTSDGYRKLRNS 686


>gi|49475069|ref|YP_033110.1| isoleucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
 gi|81648251|sp|Q6G4S5|SYI_BARHE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49237874|emb|CAF27070.1| Isoleucyl-tRNA synthetase [Bartonella henselae str. Houston-1]
          Length = 971

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 12/76 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G+KMSKS GN +   E++       +++ A + RL +
Sbjct: 618 SCGTRACSPYKAVITHGFTLDENGKKMSKSLGNTVVPQEII-------KTFGADIFRLWV 670

Query: 312 LMTHYREPIDFTVQRL 327
           + T Y     +  QRL
Sbjct: 671 MTTDY-----WEDQRL 681


>gi|228988590|ref|ZP_04148676.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228771041|gb|EEM19521.1| Arginyl-tRNA synthetase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
          Length = 556

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 16/77 (20%)

Query: 9   NTLERKIT--EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
           NT +R+    EF + +P+               H+G+AR   V D L  LL     +   
Sbjct: 118 NTGKREKVQVEFVSANPT------------GDLHLGHARGAAVGDTLCNLLAKAGYDVSR 165

Query: 67  TYVRNITDIDDKIIERA 83
            Y  N  D  ++I   A
Sbjct: 166 EYYIN--DAGNQIHNLA 180


>gi|254519578|ref|ZP_05131634.1| leucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
 gi|226913327|gb|EEH98528.1| leucyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
          Length = 816

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 58/147 (39%), Gaps = 19/147 (12%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ N+ +         + + V R+ ++    Y E   ++ 
Sbjct: 565 HQGLILGPDGLKMSKSKGNTISPNDYIS-------EYGSDVFRMYLMFGFAYIEGGAWSD 617

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-----LHKLARESTKNH 379
             L      + +  +       I    + A  N+  T+   +      LH   +  T++ 
Sbjct: 618 DGLKSVARFVDRIERYL----DIAREAIEANNNNKTTLDKAEKELNFWLHNAIKGVTEDA 673

Query: 380 DLLPIFNASAHILG-IEVCKEHLNKNI 405
           D      A A ++  +    ++L +++
Sbjct: 674 DKFQFNTAIARMMEFVNAFSKYLQEDV 700


>gi|225631279|ref|ZP_03787959.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
 gi|225591024|gb|EEH12226.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
           uniraptor]
          Length = 1067

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      E   N   H   L+++G+K+SK   N+    E+ +        + +  +R  M
Sbjct: 573 STALFDREPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDR-------YGSDALRFLM 625

Query: 312 LMT 314
           L  
Sbjct: 626 LSG 628


>gi|162139845|ref|YP_318075.2| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 544

 Score = 37.5 bits (86), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 48/135 (35%), Gaps = 19/135 (14%)

Query: 35  VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           VY     HIG+A   I  D L R  R     K V ++    +   K+++ A++E      
Sbjct: 42  VYPNGAPHIGHAYEAIATDALARFQRLDG--KDVFFLTGTDEHGQKMVQTAQRE------ 93

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYE 147
           N +   + ++N +   K    L   +     R +       +  +    + +  +G  Y 
Sbjct: 94  NISALELATRNAELLRKLDEALDI-SFDRFIRTSESAHHRSVQDIW---KRMAGNGDIYL 149

Query: 148 ANNEIIFDTSSIPNY 162
           +N    +       Y
Sbjct: 150 SNYSGWYSVRDEAYY 164


>gi|329923262|ref|ZP_08278747.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
 gi|328941497|gb|EGG37788.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
          Length = 546

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 42/127 (33%), Gaps = 15/127 (11%)

Query: 27  RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
            +++ G   Y     H+G    ++  DVL R  R       V YV         +  +A 
Sbjct: 3   NIFIGGAWPYANGSLHLGRLASLLPGDVLARYFRAKG--DHVLYVSGSDCHGTPVAVQAI 60

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNIIL 141
           QE            I  +   +F +   +L         R   A +H   +  L   ++ 
Sbjct: 61  QE------GVTPGDIADRYHAEFAECFAQLGFSY-DLYTRTDQAFHH-GVVQELFLKLLD 112

Query: 142 HGHAYEA 148
           +GH Y  
Sbjct: 113 NGHLYRK 119


>gi|282908486|ref|ZP_06316316.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282327548|gb|EFB57831.1| isoleucyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
           WW2703/97]
          Length = 329

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 7/67 (10%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
           EG+KMSKS GN I  +++++ K        A + RL +  T Y   +  + + L +   +
Sbjct: 4   EGKKMSKSLGNVIVPDQVVKQKG-------ADIARLWVSSTDYLADVRISDEILKQTSDV 56

Query: 334 LSKWPQT 340
             K   T
Sbjct: 57  YRKIRNT 63


>gi|76800688|ref|YP_325696.1| arginyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
 gi|109895007|sp|Q3IUQ6|SYR_NATPD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|76556553|emb|CAI48124.1| arginine--tRNA ligase [Natronomonas pharaonis DSM 2160]
          Length = 580

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 40/125 (32%), Gaps = 5/125 (4%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G AR  I+ D +  LL Y   +    Y  N       +   A +      +
Sbjct: 125 PT--GPVHVGRARNPIIGDAVANLLSYAGYDVDRHYYVNDAGRQMAVFTWAYETFDESDL 182

Query: 93  NDAISIITS-KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
            +        +  + + K    L    P     A   I  ++  +++       YE   E
Sbjct: 183 PEPARDRAEYRMVRYYRKGNEYLENADPDAVEAAEAEIQDILQGLEDGDE--ATYERVGE 240

Query: 152 IIFDT 156
           ++   
Sbjct: 241 VVDTV 245


>gi|302666831|ref|XP_003025011.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
 gi|291189091|gb|EFE44400.1| hypothetical protein TRV_00816 [Trichophyton verrucosum HKI 0517]
          Length = 1012

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 61/205 (29%), Gaps = 45/205 (21%)

Query: 249 IAQSCCADRIEKTANIWI----HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP- 303
           I+              +     H   L+  GRKMSKS GN I  +E++            
Sbjct: 600 ISHQLAEGGKSSFKAPFKTLITHGFTLDQYGRKMSKSIGNTIQPDEIMGGTLLPPLKPKK 659

Query: 304 -------------------APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------ 338
                                 +RL    + Y + +    Q L    I L K+       
Sbjct: 660 IKGKGPKPNPDVPVYDALGPDALRLWAAGSDYTKDVIIGQQVLKAVNISLHKFRVTFKLL 719

Query: 339 ----QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
               Q    +  +    L A+        A+  LH L + S +  D +  F A   +   
Sbjct: 720 LGALQDFDPRNEVPYESLHAIDK-----IALVQLHNLVKSSQEAVDKMEFFKAVTAM--- 771

Query: 395 EVCKEHLNKNISIAIEKLVQERLIL 419
               +  N   S    + +++RL  
Sbjct: 772 ---NKWANLEFSAFYIEAIKDRLYA 793


>gi|268602746|ref|ZP_06136913.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268681295|ref|ZP_06148157.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268685772|ref|ZP_06152634.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
 gi|268586877|gb|EEZ51553.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|268621579|gb|EEZ53979.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|268626056|gb|EEZ58456.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 878

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 774


>gi|268600513|ref|ZP_06134680.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291044687|ref|ZP_06570396.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
 gi|268584644|gb|EEZ49320.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|291011581|gb|EFE03577.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 878

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 774


>gi|240117059|ref|ZP_04731121.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
 gi|240122697|ref|ZP_04735653.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
 gi|240127398|ref|ZP_04740059.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|240015766|ref|ZP_04722306.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA6140]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKEIKDLRHKLHSTTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|240013321|ref|ZP_04720234.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI18]
 gi|240120392|ref|ZP_04733354.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID24-1]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|108761325|ref|YP_632907.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
 gi|108465205|gb|ABF90390.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
          Length = 831

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 34/99 (34%), Gaps = 16/99 (16%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            P   + YV     Y     H+G+ R  ++ DV  R  R               D+   +
Sbjct: 29  RPGAPKKYVLEMLPYPSGKMHMGHVRNYLLGDVYARYFRMKGF-----------DVLHPM 77

Query: 80  IERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
              A     E+ +I      ++ T++N   F K+   L 
Sbjct: 78  GWDALGLPAENAAIKDGVHPAVRTAENIASFKKEIKSLG 116


>gi|329117589|ref|ZP_08246306.1| isoleucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
 gi|326907994|gb|EGE54908.1| isoleucine--tRNA ligase [Streptococcus parauberis NCFD 2020]
          Length = 931

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 59/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKEVLSQGFVLDGKGEKMSKSKGNTILPSDV-------TKQYGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN------TVSAI 365
                   +  ++  L +      K   T           L A  +D N          +
Sbjct: 623 TSVDTDNDVRVSMDILGQVSETYRKIRNTLR--------FLIANTSDFNPNTDAVAYENL 674

Query: 366 QALH-----------KLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
            A+            +L   S  ++D + I+ A  + + I++   +L+
Sbjct: 675 SAVDKYMTIKFNKLVELINTSYASYDFMAIYKAVVNFVTIDLSAFYLD 722


>gi|313897678|ref|ZP_07831220.1| valine--tRNA ligase [Clostridium sp. HGF2]
 gi|312957630|gb|EFR39256.1| valine--tRNA ligase [Clostridium sp. HGF2]
          Length = 874

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 59/160 (36%), Gaps = 13/160 (8%)

Query: 186 KNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
           ++P D   W +   +   W S   W     GW  E +   + Y     D+   G D+IF 
Sbjct: 431 EDPQDLENWIQDEDVLDTWFSSALWPFSTLGWPKE-TDDLNRYFPN--DVLVTGYDIIFF 487

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
                  Q+    +     ++ IH    + +GRKMSKS GN I   +++           
Sbjct: 488 WVARMAFQTRYCMKNRPFKDVLIHGLVRDAQGRKMSKSLGNGIDPMDVIADHGV------ 541

Query: 304 APVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
              +R  +       + + +  +++  +   ++K    S 
Sbjct: 542 -DALRFFLTTNSTPGQDLRYIDEKVEASANFINKIWNASR 580


>gi|240114857|ref|ZP_04728919.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
 gi|260441328|ref|ZP_05795144.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae DGI2]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.6,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|307193339|gb|EFN76201.1| Leucyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
          Length = 1126

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 33/84 (39%), Gaps = 9/84 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFIT 287
             D+   G DL+  H    +         E          NG L L   KMSKS GNF+T
Sbjct: 610 PVDLRVSGKDLVPNHFTYFLYNHTAMWPNEPEMWPQGIRANGHLLLNSTKMSKSEGNFLT 669

Query: 288 INELLETKKFGGRSWPAPVIRLAM 311
           + E +E        + A  +RL +
Sbjct: 670 LAEAVE-------KFSADGMRLCL 686


>gi|284931394|gb|ADC31332.1| leucyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
          Length = 805

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 41/127 (32%), Gaps = 16/127 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEI------AQSCCADRIEKTANIWIHNGF-LNLEGRKMSKSN 282
             D++ GG +    H            Q       E  + + I+ G  L  +  KMSKS 
Sbjct: 530 PVDLYVGGQEHAVLHLLYARFWYKFLHQIKIVSSTEPFSKL-INQGMILGEDNTKMSKSK 588

Query: 283 GNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           GN I  ++L+ +         A  IR   M M      + +    L      L +     
Sbjct: 589 GNIINPDDLVLSHG-------ADTIRTYVMFMGPLNASLAWNSNALNGTRKFLERVYNLF 641

Query: 342 TSKGIID 348
               I D
Sbjct: 642 DRVEIND 648


>gi|257462510|ref|ZP_05626922.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|317060166|ref|ZP_07924651.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
 gi|313685842|gb|EFS22677.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
          Length = 852

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 54/157 (34%), Gaps = 41/157 (26%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTE 329
           L ++  KMSKS  N +   E++         + A   RL ++      + +++    L  
Sbjct: 605 LLVKVEKMSKSKNNGVDPEEMI-------LKYGADTTRLFIMFAAPPEKELEWNENGLAG 657

Query: 330 AEILLSK-WP-----QTSTSKGIID-------------------PAVLSALYND--LNTV 362
           A   L++ W      QT  S   ID                     V  ++ ND   NT 
Sbjct: 658 AYRFLTRVWRLVLENQTHISLEKIDYTTISKSDKALIIKLNQTIKKVTESIENDYHFNTS 717

Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
             I A+ +L  E          +     +LG E  K+
Sbjct: 718 --IAAIMELLNEIQAYKSDSTQY---TRVLG-EALKQ 748



 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 36/132 (27%), Gaps = 15/132 (11%)

Query: 21  IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           +       YV     Y     H+G+AR   + DV+ R  R       V +          
Sbjct: 28  VVEGKENYYVLEMLPYPSGKLHVGHARNYTIGDVIARYKRMKGYN--VLHPMGWDSFGLP 85

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ- 137
               A Q           +  T  N +   +    L       +  A+ + P+     Q 
Sbjct: 86  AENAAIQNGAH------PATWTKSNIENMKRQLKLLGFSYDWDREIAS-YTPEYYKWNQW 138

Query: 138 ---NIILHGHAY 146
               +   G  Y
Sbjct: 139 IFKKMYEKGLVY 150


>gi|254492918|ref|ZP_05106089.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268593990|ref|ZP_06128157.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268596044|ref|ZP_06130211.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268598169|ref|ZP_06132336.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268683466|ref|ZP_06150328.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|226511958|gb|EEH61303.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
 gi|268547379|gb|EEZ42797.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|268549832|gb|EEZ44851.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|268582300|gb|EEZ46976.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|268623750|gb|EEZ56150.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
          Length = 878

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 774


>gi|78776936|ref|YP_393251.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497476|gb|ABB44016.1| valyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 875

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 8/91 (8%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM- 311
                     +I++H    +  G+KMSKS GN I   +++E        + A ++R  + 
Sbjct: 509 ESFVGELPFNHIYLHALVRDEHGQKMSKSKGNVIDPLDMVE-------KYSADILRFTLA 561

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +       I  +  +L +     +K    + 
Sbjct: 562 ISAAQGRDIRMSTDKLEQNRNFTNKLYNAAK 592


>gi|328884156|emb|CCA57395.1| Methionine--tRNA ligase [Streptomyces venezuelae ATCC 10712]
          Length = 521

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 35/114 (30%), Gaps = 23/114 (20%)

Query: 33  PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           P  +   HIG+ A P +  DVL R LR     + V +     D    +  RA + H    
Sbjct: 12  PATHGELHIGHLAGPYVAADVLTRYLRAEG--EAVRFTTGTADHASSVEVRALRHH---- 65

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
                  +          D  R             +HI      ++     G+A
Sbjct: 66  --RKPEEVAEGYRAAITADWLRSGVE--------FDHI------VRPRRDKGYA 103


>gi|323451800|gb|EGB07676.1| hypothetical protein AURANDRAFT_71793 [Aureococcus anophagefferens]
          Length = 1349

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 234  HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
            H  G D++  H     A    AD +     I+ H G+   +G K+SKS GN +   ELL 
Sbjct: 1087 HVVGKDILRFHAVYWPALLLAAD-LPPPKKIFAH-GWWTKDGAKISKSLGNVVVPAELLA 1144

Query: 294  TKKFGGRSWPAPVIRLAMLM 313
                    +     R  +L 
Sbjct: 1145 D-------YGVDATRYFLLS 1157


>gi|312112663|ref|YP_003990979.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
 gi|311217764|gb|ADP76368.1| arginyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
          Length = 556

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 48/163 (29%), Gaps = 47/163 (28%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G+AR   V D L  +L     +    Y  N  D  ++I   A+        
Sbjct: 134 PT--GDLHLGHARGAAVGDSLCNILEKAGFDVTREYYIN--DAGNQIYNLAKS------- 182

Query: 93  NDAISIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYLIQNI-ILHGHAYEA 148
                        ++ +    L     +          +   +I + + +   HG  Y  
Sbjct: 183 ----------VEARYFQ---ALGIDKEMPEDGY-----YGDDIIEIGKKLAEEHGDKYVH 224

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
             +     +    YG              R   +  KK+ ADF
Sbjct: 225 M-DEQERLAFFREYG-------------LRYELEKIKKDLADF 253


>gi|194097598|ref|YP_002000634.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|239998140|ref|ZP_04718064.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
 gi|240079903|ref|ZP_04724446.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
 gi|240112111|ref|ZP_04726601.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
 gi|240124885|ref|ZP_04737771.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
 gi|238690207|sp|B4RNT1|SYL_NEIG2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|193932888|gb|ACF28712.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae NCCP11945]
 gi|317165582|gb|ADV09123.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|139436956|ref|ZP_01771116.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
           25986]
 gi|133776603|gb|EBA40423.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
           25986]
          Length = 925

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 56/186 (30%), Gaps = 28/186 (15%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      HIG+A   I  D++ R       E    YV         I  +  ++  
Sbjct: 52  YANGP-----IHIGHAMNKISKDMINRYWMMQGYEVP--YVPGWDCHGQPIEHKVEEKLG 104

Query: 89  SIPINDAISI--------ITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQ 137
           +   N   +            +N +       RL  L     P  T    H    I + +
Sbjct: 105 TEKFNQTSTAKIRELCNKFAVENIELQKAGFRRLGVLGDWDNPYLTLYHQHDAADIEVFK 164

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---------KMGTRVPEKYHKKNP 188
            +   G  Y  +  +           + +  +  ++         +M ++     +   P
Sbjct: 165 AMFDKGMIYRGHKPV-HWCKHCHTALAEAEIEYSDETSPSIFVRFEMTSKPVGLENFDGP 223

Query: 189 ADFILW 194
            DFI+W
Sbjct: 224 VDFIIW 229


>gi|59800478|ref|YP_207190.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|293397791|ref|ZP_06641997.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
 gi|59717373|gb|AAW88778.1| putative leucyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
 gi|291611737|gb|EFF40806.1| leucyl-tRNA synthetase [Neisseria gonorrhoeae F62]
          Length = 878

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 635 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 687

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 688 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 745

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 746 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 774


>gi|58698342|ref|ZP_00373257.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225630139|ref|YP_002726930.1| Isoleucyl-tRNA synthetase, class Ia [Wolbachia sp. wRi]
 gi|58535132|gb|EAL59216.1| isoleucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
           ananassae]
 gi|225592120|gb|ACN95139.1| Isoleucyl-tRNA synthetase, class Ia [Wolbachia sp. wRi]
          Length = 1103

 Score = 37.5 bits (86), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S      E   N   H   L+++G+K+SK   N+    E+ +        + +  +R  M
Sbjct: 612 STALFDREPFKNCICHGVVLDVKGQKLSKRLNNYADPMEVFDR-------YGSDALRFLM 664

Query: 312 LMT 314
           L  
Sbjct: 665 LSG 667


>gi|313635219|gb|EFS01522.1| methionyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
          Length = 665

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKLTVEKIFE---QLLEQGDIYLGEYEGW 129

Query: 154 FDTS 157
           +  S
Sbjct: 130 YSVS 133


>gi|307544817|ref|YP_003897296.1| leucyl-tRNA synthetase [Halomonas elongata DSM 2581]
 gi|307216841|emb|CBV42111.1| leucyl-tRNA synthetase [Halomonas elongata DSM 2581]
          Length = 860

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 53/156 (33%), Gaps = 45/156 (28%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    +++        + A  +RL M+      + ++++   +  A   L
Sbjct: 618 EKMSKSKNNGVDPQAMIDR-------FGADTVRLFMMFAAPPEQSLEWSDSGVEGAHRFL 670

Query: 335 SKW------------PQTSTSKGIIDP---------AVLSALYND------LNTVSAIQA 367
            +             P T  ++ + D            +    +D       NT  AI A
Sbjct: 671 KRLWRLVAEHLEAGTPATLDTESLDDAQRELRRKTHETIQKASDDIGRRTTFNT--AIAA 728

Query: 368 LHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
           + +L     K  D  P        LG+ V +E +  
Sbjct: 729 VMELTNALGKFDDTSP--------LGLAVAREAVEA 756


>gi|229815197|ref|ZP_04445533.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
 gi|229809207|gb|EEP44973.1| hypothetical protein COLINT_02243 [Collinsella intestinalis DSM
           13280]
          Length = 942

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 29/186 (15%), Positives = 54/186 (29%), Gaps = 28/186 (15%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      H+G+A   I  D++ R       E    YV         I  +   +  
Sbjct: 69  YANGP-----IHLGHAMNKIAKDMINRYKAMQGYETP--YVPGWDCHGQPIEHKVETQMG 121

Query: 89  SIPINDAISI--------ITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQ 137
           +   N A +            +N     +   RL  L     P  T    H    I   +
Sbjct: 122 TEKFNQASTAEIRELCNKFAVENIDLQREGFKRLGVLGDWDNPYLTLYHQHDAADIEAFK 181

Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---------KMGTRVPEKYHKKNP 188
            +   G  Y  +  +           + +  +  ++         ++ ++         P
Sbjct: 182 AMFDRGMVYRGHKPV-HWCKHCHTALAEAEIEYADETSPSIYVRFELTSKPAGLESFDGP 240

Query: 189 ADFILW 194
            DF++W
Sbjct: 241 VDFVIW 246


>gi|328906096|gb|EGG25871.1| methionine--tRNA ligase [Propionibacterium sp. P08]
          Length = 601

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 17/137 (12%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTV-- 324
           + FL + G K+S S G  I + + L       R +    +R  + +     +  DFT   
Sbjct: 349 SEFLTMSGSKVSNSRGATIFVGDFL-------REFGPDALRYFIAIAGPENQDTDFTWEE 401

Query: 325 -------QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
                  +   E   L+++    +       PA       D   + A  A   +  E   
Sbjct: 402 FVRRVNFELANEWGNLVNRLISMAFKNCHGIPAAGELTDADRQLLDASVAGFDVVGELLA 461

Query: 378 NHDLLPIFNASAHILGI 394
           +         +  I+G+
Sbjct: 462 HAKFKAAITEAMRIVGL 478


>gi|313835960|gb|EFS73674.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
 gi|314927197|gb|EFS91028.1| methionyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
 gi|314970728|gb|EFT14826.1| methionyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
          Length = 592

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 45/137 (32%), Gaps = 17/137 (12%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTV-- 324
           + FL + G K+S S G  I + + L       R +    +R  + +     +  DFT   
Sbjct: 340 SEFLTMSGSKVSNSRGATIFVGDFL-------REFGPDALRYFIAIAGPENQDTDFTWEE 392

Query: 325 -------QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
                  +   E   L+++    +       PA       D   + A  A   +  E   
Sbjct: 393 FVRRVNFELANEWGNLVNRLISMAFKNCHGIPAAGELTDADRQLLDASVAGFDVVGELLA 452

Query: 378 NHDLLPIFNASAHILGI 394
           +         +  I+G+
Sbjct: 453 HAKFKAAITEAMRIVGL 469


>gi|225024476|ref|ZP_03713668.1| hypothetical protein EIKCOROL_01351 [Eikenella corrodens ATCC
           23834]
 gi|224942751|gb|EEG23960.1| hypothetical protein EIKCOROL_01351 [Eikenella corrodens ATCC
           23834]
          Length = 876

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 48/153 (31%), Gaps = 48/153 (31%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +   EL+E       ++ A   RL M+      P    ++++   +  A 
Sbjct: 632 EKMSKSKNNGVDPQELIE-------AYGADTARLFMMFA---SPPEQSLEWSDAGVEGAH 681

Query: 332 ILLSKW----PQTSTSKGIIDPAV---LSALY------------------ND------LN 360
             L +      +   + G           AL                   +D       N
Sbjct: 682 RFLRRLWRTVYEFVQNGGSGASKFSGSQEALSGSLKDLRFKLHSTIAKVTDDYDRRQQFN 741

Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASA-HIL 392
           T  AI A+ +L  +  K         A A  +L
Sbjct: 742 T--AIAAVMELLNQYDKTDTSGEHGQAVAREVL 772


>gi|237809562|ref|YP_002894002.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
 gi|237501823|gb|ACQ94416.1| leucyl-tRNA synthetase [Tolumonas auensis DSM 9187]
          Length = 861

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 48/154 (31%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----ID 321
           IH G       KMSKS  N I    ++E        + A  +RL M+      P    ++
Sbjct: 615 IHAGM-----TKMSKSKNNGIDPQLMVER-------YGADTVRLFMMFA---SPADMTLE 659

Query: 322 FTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSAL------------------YND-- 358
           +    +  A+  L +  +     T+KG      +++L                   +D  
Sbjct: 660 WQESGVDGAQRFLKRLWKAVAEHTAKGAAPELDVASLSNEQKTLRRELHKTIAKFSDDIG 719

Query: 359 ----LNTVSAIQALHKLARESTKNHDLLPIFNAS 388
                NT  AI A+ +L     K         A 
Sbjct: 720 RRQTFNT--AIAAVMELMNRVAKAPQESDQDRAL 751


>gi|189030334|sp|Q5FAJ3|SYL_NEIG1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 876

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 49/149 (32%), Gaps = 41/149 (27%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +   EL+        ++ A   RL M+      + ++++   +  A   L
Sbjct: 633 EKMSKSKNNGVDPQELIN-------AYGADTARLFMMFAAPPEQSLEWSDSGVEGAHRFL 685

Query: 335 SKWPQTS---TSKGIIDPAVL---------------------SALYND------LNTVSA 364
            +  +T      +G    A                       + + +D       NT  A
Sbjct: 686 RRLWRTVYEYLKQGGAVKAFAGNQDGLSKELKDLRHKLHSTTAKVSDDYGRRQQFNT--A 743

Query: 365 IQALHKLARESTKNHDLLPIFNASA-HIL 392
           I A+ +L  +  K         A A  +L
Sbjct: 744 IAAVMELLNQYDKTDTGSEQGRAVAQEVL 772


>gi|289423107|ref|ZP_06424922.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156438|gb|EFD05088.1| isoleucine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 1041

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 10/83 (12%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ + +  L+  G+KMSKS GN I   E+ +        +    +R
Sbjct: 570 LAVSTFVTGKAPYKNVLVTDLVLDKNGKKMSKSKGNTINPFEMFD-------KYGVDALR 622

Query: 309 LAML--MTHYREPIDFTVQRLTE 329
             +L     +  PI F    L E
Sbjct: 623 WYLLYVSPPW-TPIRFDEDGLKE 644


>gi|228476230|ref|ZP_04060933.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
 gi|228269715|gb|EEK11214.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
          Length = 658

 Score = 37.5 bits (86), Expect = 4.8,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTELEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
             +      +   +L         R T   H  Q++  + + ++  G  Y    E  +  
Sbjct: 72  LDEMIAGIKRLWAKLEISNDDF-IRTTEERH-KQVVEKVFERLLKQGDIYLGEYEGWYSV 129

Query: 157 SSIPNY 162
                Y
Sbjct: 130 PDETYY 135


>gi|322498828|emb|CBZ33901.1| unnamed protein product [Leishmania donovani BPK282A1]
          Length = 747

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 47/130 (36%), Gaps = 21/130 (16%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ DVL R  R    E    +V   TD   + +  A  +    P+ D
Sbjct: 220 VNASPHIGHVYSTLIVDVLGRYHRVKGEE---VFVMTGTDEHGQKVAEAAAKQGVSPM-D 275

Query: 95  AISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYE 147
             + ++S+  + F +   D          +  R TN  P    L+Q     +   G  Y 
Sbjct: 276 FTTSVSSEFKECFKEMNYDM--------NYFIRTTN--PTHEKLVQDIWKKLEAKGDIYL 325

Query: 148 ANNEIIFDTS 157
              E  +  S
Sbjct: 326 GKYEGWYSVS 335


>gi|314937303|ref|ZP_07844645.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
 gi|313654599|gb|EFS18349.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
          Length = 659

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 21  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTELEY 72

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
             +      +   +L         R T   H  Q++  + + ++  G  Y    E  +  
Sbjct: 73  LDEMIAGIKRLWAKLEISNDDF-IRTTEERH-KQVVEKVFERLLKQGDIYLGEYEGWYSV 130

Query: 157 SSIPNY 162
                Y
Sbjct: 131 PDETYY 136


>gi|309810612|ref|ZP_07704423.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
 gi|308435413|gb|EFP59234.1| lysine--tRNA ligase [Dermacoccus sp. Ellin185]
          Length = 601

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 28/97 (28%), Gaps = 12/97 (12%)

Query: 32  GPTVYDFAHIGNAR----PMIVFDVLYRL---LRYYYGEKCVTYVRNITDIDDKIIERAR 84
           G +     H+GN R    P +V D + R      +          R + +++       +
Sbjct: 32  GISPSGPVHLGNLREVMTPHLVADEIRRRGIECEHIISWDDFDRYRKVPNVEGVDASYEQ 91

Query: 85  QEHPSI-----PINDAISIITSKNTQQFVKDTTRLAC 116
                +     P   + S        QF +    L  
Sbjct: 92  YIGMPLTRVPAPKGSSASSWAEHFRAQFEEGLAALGV 128


>gi|297622523|ref|YP_003703957.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297163703|gb|ADI13414.1| methionyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 655

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 39/130 (30%), Gaps = 11/130 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+A    + DV+ R  R         ++    +  +KI + A           
Sbjct: 39  VNAEPHIGHAYTTTLVDVVTRFHRLKG--DDTLFLTGTDEHGEKIQKAADA------AGL 90

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
           +    T +  ++F      L   A     R T   H   +  ++  +   G         
Sbjct: 91  SPQAYTDRVAKKFQDTWNSLGI-AYDEFIRTTEARHQAVVHEVLTRVYEAGDIIFGEYGG 149

Query: 153 IFDTSSIPNY 162
           ++       Y
Sbjct: 150 LYCVGCERYY 159


>gi|254474819|ref|ZP_05088205.1| flagellar motor protein [Ruegeria sp. R11]
 gi|214029062|gb|EEB69897.1| flagellar motor protein [Ruegeria sp. R11]
          Length = 655

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 25/134 (18%)

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE--STKNHD 380
           T ++L  A   L      +  + ++   +L+AL +               RE  S K  D
Sbjct: 345 TEEKLLTALEQLELANAAAADRDVLQQRLLAALSD---------------REDASAKASD 389

Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
           L  +    A +L     +E L++   I+ E    +R   L  ++ +    +R+QL S   
Sbjct: 390 LASLAEQRAALLA--QARESLSQEQEISQEA---QRQTALLNQQVA---ALREQLGSLQA 441

Query: 441 ILEDYKNPDNGQRM 454
           +L+DYK  D  Q++
Sbjct: 442 LLDDYKARDVAQQV 455


>gi|90416857|ref|ZP_01224786.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
 gi|90331204|gb|EAS46448.1| leucyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
          Length = 867

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 41/136 (30%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLS 335
           KMSKS  N +     ++          A  +RL  M      + ++++   ++ A   L 
Sbjct: 622 KMSKSKNNGVDPQTAIDKHG-------ADTVRLFTMFAAPPEQTLEWSDDGVSGAHRFLR 674

Query: 336 KW----------PQTSTSKGIIDP---------------AVLSALYND------LNTVSA 364
           K                    I P                 ++ + +D       NT  A
Sbjct: 675 KLWTMVHSHLDQAAAGGKPAQIHPESLNESHKDLRRKTHETINKVNDDYGRRNTFNT--A 732

Query: 365 IQALHKLARESTKNHD 380
           I A+ +L  E  K+ D
Sbjct: 733 IAAVMELLNEVAKHSD 748


>gi|89052902|ref|YP_508353.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
 gi|122999652|sp|Q28VD4|SYL_JANSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|88862451|gb|ABD53328.1| leucyl-tRNA synthetase [Jannaschia sp. CCS1]
          Length = 863

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 30/97 (30%), Gaps = 10/97 (10%)

Query: 21  IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
           ++ +  + YV    P      HIG+ R   + DV+ R  +       V +        D 
Sbjct: 27  MEGNKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARHKKAMG--HNVLHPMGF----DA 80

Query: 79  IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
               A  E+ ++         T KN          L 
Sbjct: 81  FGLAA--ENAAMDRGIHPKDWTYKNMDDMRDQMRPLG 115


>gi|319408050|emb|CBI81704.1| Isoleucyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 978

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G+KMSKS GN +   ++++T         A + RL +
Sbjct: 618 SCGTRACSPYKTVITHGFTLDENGKKMSKSLGNTVVPQDVIKTSG-------ADIFRLWV 670

Query: 312 LMTHYREPIDFTVQRL 327
           + T Y     +  QRL
Sbjct: 671 MTTDY-----WEDQRL 681


>gi|289433525|ref|YP_003463397.1| Methionyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289169769|emb|CBH26305.1| metS [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|313639884|gb|EFS04591.1| methionyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
          Length = 665

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 17/124 (13%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 22  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 73

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN-----HIPQMIYLIQNIILHGHAYEANNEII 153
              +  + F +   +L     T   R T       + ++      ++  G  Y    E  
Sbjct: 74  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKLTVEKIFE---QLLEQGDIYLGEYEGW 129

Query: 154 FDTS 157
           +  S
Sbjct: 130 YSVS 133


>gi|225868956|ref|YP_002744904.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
 gi|225702232|emb|CAW99977.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
          Length = 932

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 15/138 (10%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +  +L    D++  G D       + +  S   +       I      L+ +G KMSKS 
Sbjct: 541 ARDHLAYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAILSQGFVLDGKGEKMSKSK 600

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GN I+ N++        + + A ++RL +        +  ++  L +      K   T  
Sbjct: 601 GNIISPNDV-------AKQYGADILRLWVASVDTDNDVRVSMDILGQVSETYRKIRNTLR 653

Query: 343 SKGIIDPAVLSALYNDLN 360
                    L A  +D N
Sbjct: 654 --------FLLANTSDFN 663


>gi|225870036|ref|YP_002745983.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
 gi|225699440|emb|CAW92935.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
          Length = 932

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 15/138 (10%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +  +L    D++  G D       + +  S   +       I      L+ +G KMSKS 
Sbjct: 541 ARDHLAYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAILSQGFVLDGKGEKMSKSK 600

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GN I+ N++        + + A ++RL +        +  ++  L +      K   T  
Sbjct: 601 GNIISPNDV-------AKQYGADILRLWVASVDTDNDVRVSMDILGQVSETYRKIRNTLR 653

Query: 343 SKGIIDPAVLSALYNDLN 360
                    L A  +D N
Sbjct: 654 --------FLLANTSDFN 663


>gi|167648344|ref|YP_001686007.1| arginyl-tRNA synthetase [Caulobacter sp. K31]
 gi|189083526|sp|B0T019|SYR_CAUSK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|167350774|gb|ABZ73509.1| arginyl-tRNA synthetase [Caulobacter sp. K31]
          Length = 613

 Score = 37.5 bits (86), Expect = 4.9,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 58/195 (29%), Gaps = 38/195 (19%)

Query: 22  DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
            P  + +   GP V    H+G+ R  I+ + + RL R+                 D ++ 
Sbjct: 112 HPRRVLVDYAGPNVAKPMHVGHLRASIIGESVKRLYRFRG---------------DDVVG 156

Query: 82  RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI-- 139
            A        +   IS I       F++        AP    +A      M    Q +  
Sbjct: 157 DAHFGDWGFQMGLLISAIME--EDAFIRALLERLVEAPREFSKADED-KVMSEFAQRVTL 213

Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG--------------TRVPEKYHK 185
                 Y A +         P +   +R+   E + G              +RV  +   
Sbjct: 214 DDLDRLYPAAS---ARQKEDPEFKEKARKATAELQNGRFGYRLLWRHFVNISRVALEREF 270

Query: 186 KNP-ADFILWKRSTP 199
                DF LWK  + 
Sbjct: 271 HALGVDFDLWKGESD 285


>gi|326563969|gb|EGE14219.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDIYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|322369925|ref|ZP_08044487.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320550261|gb|EFW91913.1| methionyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 692

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 18/126 (14%)

Query: 30  VCG-PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
            CG P      HIG+ R  +  DV  R L      +   +V         +   A +E  
Sbjct: 15  TCGLPYANGELHIGHLRTYVGGDVYSRALETLG--QQTAFVSGSDMHGTPVAVNAEKE-- 70

Query: 89  SIPINDAISIITSKNTQQFVK-----DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
                 +      ++  ++       D           +   T    ++   ++ +   G
Sbjct: 71  ----GVSPREFALRHHDKYEATFPKFDIEFDNYGHTDDETN-TELTQEI---VRKLDEEG 122

Query: 144 HAYEAN 149
           + YE  
Sbjct: 123 YIYEKE 128


>gi|302767176|ref|XP_002967008.1| hypothetical protein SELMODRAFT_168869 [Selaginella moellendorffii]
 gi|300164999|gb|EFJ31607.1| hypothetical protein SELMODRAFT_168869 [Selaginella moellendorffii]
          Length = 347

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 20/37 (54%)

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           V++R    + + +  AD +++Q+   G+ + D +  +
Sbjct: 195 VEKRRRARENRDYKKADMLQQQIFDAGYKVFDGRGSE 231


>gi|195977738|ref|YP_002122982.1| isoleucyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
           MGCS10565]
 gi|195974443|gb|ACG61969.1| isoleucyl-tRNA synthetase IleS [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
          Length = 932

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 15/138 (10%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
           +  +L    D++  G D       + +  S   +       I      L+ +G KMSKS 
Sbjct: 541 ARDHLAYPADLYLEGSDQYRGWFNSSLITSVAVNGHAPYKAILSQGFVLDGKGEKMSKSK 600

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           GN I+ N++        + + A ++RL +        +  ++  L +      K   T  
Sbjct: 601 GNIISPNDV-------AKQYGADILRLWVASVDTDNDVRVSMDILGQVSETYRKIRNTLR 653

Query: 343 SKGIIDPAVLSALYNDLN 360
                    L A  +D N
Sbjct: 654 --------FLLANTSDFN 663


>gi|167624305|ref|YP_001674599.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
 gi|189083264|sp|B0TJ05|SYM_SHEHH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|167354327|gb|ABZ76940.1| methionyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
          Length = 679

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   + T+ ++ H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGAGLRKPTS-VYAH-GYVTVNGAKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                  +     +R  
Sbjct: 349 -------NLDPEYLRYY 358


>gi|157961740|ref|YP_001501774.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
 gi|189083265|sp|A8H3V2|SYM_SHEPA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|157846740|gb|ABV87239.1| methionyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
          Length = 679

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   + T+ ++ H G++ + G KMSKS G FI     L+
Sbjct: 291 HFIGKDIVYFHSLFWPAMLEGAGLRKPTS-VYAH-GYVTVNGAKMSKSKGTFIKARTYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                  +     +R  
Sbjct: 349 -------NLDPEYLRYY 358


>gi|326571514|gb|EGE21529.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis BC7]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|322800891|gb|EFZ21734.1| hypothetical protein SINV_07504 [Solenopsis invicta]
          Length = 1100

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/86 (30%), Positives = 35/86 (40%), Gaps = 13/86 (15%)

Query: 230 VFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
             D+   G DLI  H      N  A     ++ E        NG L L   KMSKS GNF
Sbjct: 589 PVDLRVSGKDLIQNHLTYFLYNHTAIWQ--NQPEFWPQGIRANGHLLLNSAKMSKSEGNF 646

Query: 286 ITINELLETKKFGGRSWPAPVIRLAM 311
           +T+ E +       + + A   RL +
Sbjct: 647 LTLAEAV-------KKFSADGTRLCL 665


>gi|255263257|ref|ZP_05342599.1| leucyl-tRNA synthetase [Thalassiobium sp. R2A62]
 gi|255105592|gb|EET48266.1| leucyl-tRNA synthetase [Thalassiobium sp. R2A62]
          Length = 697

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 44/146 (30%), Gaps = 14/146 (9%)

Query: 16  TEFQAI-DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
             F+A+ D +  + YV    P      H+G+ R   + DV+ R          V +    
Sbjct: 21  ETFKAVRDETKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKTSTG--HSVLHPMGW 78

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
                     A                T  N ++  +    L       +  AT    + 
Sbjct: 79  DAFGMPAENAAMAIGGH------PKTWTYDNIEEMKRQMRPLGLSIDWSREFATCDPEYY 132

Query: 130 PQMIYLIQNIILHGHAYEANNEIIFD 155
            Q   L  +++  G  Y  N  + +D
Sbjct: 133 GQQQALFLDMLAEGLIYRKNAMVNWD 158


>gi|254561520|ref|YP_003068615.1| isoleucine tRNA synthetase [Methylobacterium extorquens DM4]
 gi|254268798|emb|CAX24759.1| isoleucine tRNA synthetase [Methylobacterium extorquens DM4]
          Length = 991

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +    +++          A ++RL +
Sbjct: 634 SCGTRGHAPYDVVLTHGFVLDAKGEKMSKSRGNVVAPQNVIKESG-------ADILRLWV 686

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y + +    + +        K   +
Sbjct: 687 AAADYSDDLRIGPEIVKTFAETYRKLRNS 715


>gi|240138912|ref|YP_002963387.1| isoleucine tRNA synthetase [Methylobacterium extorquens AM1]
 gi|240008884|gb|ACS40110.1| isoleucine tRNA synthetase [Methylobacterium extorquens AM1]
          Length = 991

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +    +++          A ++RL +
Sbjct: 634 SCGTRGHAPYDVVLTHGFVLDAKGEKMSKSRGNVVAPQNVIKESG-------ADILRLWV 686

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y + +    + +        K   +
Sbjct: 687 AAADYSDDLRIGPEIVKTFAETYRKLRNS 715


>gi|188581532|ref|YP_001924977.1| isoleucyl-tRNA synthetase [Methylobacterium populi BJ001]
 gi|179345030|gb|ACB80442.1| isoleucyl-tRNA synthetase [Methylobacterium populi BJ001]
          Length = 993

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +    +++          A ++RL +
Sbjct: 634 SCGTRGHAPYDVVLTHGFVLDAKGEKMSKSRGNVVAPQNVIKESG-------ADILRLWV 686

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y + +    + +        K   +
Sbjct: 687 AAADYSDDLRIGPEIVKTFAETYRKLRNS 715


>gi|281355641|ref|ZP_06242135.1| N-acetylmuramoyl-L-alanine amidase [Victivallis vadensis ATCC
           BAA-548]
 gi|281318521|gb|EFB02541.1| N-acetylmuramoyl-L-alanine amidase [Victivallis vadensis ATCC
           BAA-548]
          Length = 312

 Score = 37.5 bits (86), Expect = 5.0,   Method: Composition-based stats.
 Identities = 8/26 (30%), Positives = 15/26 (57%)

Query: 424 KFSSADYIRKQLESKGFILEDYKNPD 449
            F+ A  IR +L  +GF ++  ++ D
Sbjct: 136 NFALAQKIRDELVKRGFTVKMTRDTD 161


>gi|327399977|ref|YP_004340816.1| Isoleucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
 gi|327315485|gb|AEA46101.1| Isoleucyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
          Length = 1046

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 22/166 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A        + +H   L+ +GRKMSKS GN           +           RL +
Sbjct: 562 SVVAFNRAPYKTVLMHGFTLDEQGRKMSKSLGNV-------VEPEEVVEKIGVDAFRLYV 614

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----GIIDPAVLSALYNDLN------- 360
           L +   E + F+ +       +L+ +            +     +S++  D         
Sbjct: 615 LSSALWEDLRFSWEEAKNYNRMLNIFWNAVRFAYMYMSLDRKDFISSILADFEYEKHQTV 674

Query: 361 ----TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                +S +++L+KLA E+ +N+ L  +  A    +  +  + ++ 
Sbjct: 675 EDRWIISKLESLNKLAVEALENYQLHRVVRAFFDFIVEDFSRWYVQ 720


>gi|291391982|ref|XP_002712314.1| PREDICTED: methionine-tRNA synthetase 2 [Oryctolagus cuniculus]
          Length = 612

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%), Gaps = 8/58 (13%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
              +     I +H+ +  + G+KMSKS GN +     LE        +     R  +L
Sbjct: 345 GAGLSPPHRICVHSHW-TVCGQKMSKSLGNVVDPRTCLE-------HYTVDGFRYFLL 394


>gi|291230340|ref|XP_002735133.1| PREDICTED: Arginyl-tRNA synthetase-like [Saccoglossus kowalevskii]
          Length = 666

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 59/380 (15%), Positives = 116/380 (30%), Gaps = 51/380 (13%)

Query: 40  HIGNARPMIVFDVLYRLLRYYY---------GEKCVTYVRNITDIDDKIIERARQEHPSI 90
           H+G+ R  I+ D + RL  +           G+    +   I  + DK      +  P  
Sbjct: 214 HVGHLRSTIIGDSISRLYEFLGHDVLRLNHIGDWGTQFGMLIAHLMDKFPNYVAESPPIG 273

Query: 91  PINDAISI--ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
            + D      I   N ++F K    L       +P  T     +  + +      +    
Sbjct: 274 DLQDFYKESKIRFDNEEEFKKRAYSLVVKLQAKEPDITKAWNLICDVSRREFQKIYD-RL 332

Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA----DFILWKRSTPMEPGW 204
           + +I+    S   Y       +   +    V     +K       D  L    +     +
Sbjct: 333 DIKIVERGESF--YQDMMGDTVRALEAKGVVEVDDGRKVVFVPGHDVPLTVVKSDGGNTY 390

Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI-AQSCCADRIEKTAN 263
           ++             +A+      +  D+    +D     H N I A        + ++ 
Sbjct: 391 DTSD----------MAALHHRLFDEHADVILYVVDAGQGLHFNLIFAAGKLVGWYDPSST 440

Query: 264 IWIHNGF---LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
              H GF   L  + +K    +G  I + +LLE              R  +L        
Sbjct: 441 RVEHIGFGVVLGEDKKKFKTRSGETIRLADLLEEGLKRSLQKLKDKNRHEIL-------- 492

Query: 321 DFTVQRLTEAEILLS----KWPQTSTSKGIIDPAVLSALYNDL-NTVS----AIQALHKL 371
             T + L  A+  ++    K+   S ++          + +D  NT +    A   +  +
Sbjct: 493 --TAEELKAAQESVAYGCIKYSDLSHNRVNDYVFSFDKMLDDKGNTAAYLLYAFTRIRSI 550

Query: 372 ARESTKNHDLLPIFNASAHI 391
           AR +  + D L     +  +
Sbjct: 551 ARLANIDRDTLKKAAETTAV 570


>gi|217032547|ref|ZP_03438037.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298735844|ref|YP_003728369.1| valyl-tRNA synthetase [Helicobacter pylori B8]
 gi|216945752|gb|EEC24376.1| hypothetical protein HPB128_172g10 [Helicobacter pylori B128]
 gi|298355033|emb|CBI65905.1| valyl-tRNA synthetase [Helicobacter pylori B8]
          Length = 872

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 59/184 (32%), Gaps = 25/184 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--LSALYNDLNTVS-- 363
                       I  +   L   +   +K     +   +   A      L     T    
Sbjct: 559 ANLCATG---RDIKLSTTHLENNKNFANKIFNAVSYLKLKQEAFKDRERLNE-YQTPLGR 614

Query: 364 -AIQALHKLARESTKNHDLLPIFNASA---HILGIEVCKE--HLNKNISIAIEKLVQERL 417
            A   L+   +E+    D     +A+      L  E C      +K  + AI++L     
Sbjct: 615 YAKSRLNSATKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSKVENEAIDELGSVLK 674

Query: 418 ILLK 421
             LK
Sbjct: 675 EALK 678


>gi|163851748|ref|YP_001639791.1| isoleucyl-tRNA synthetase [Methylobacterium extorquens PA1]
 gi|163663353|gb|ABY30720.1| isoleucyl-tRNA synthetase [Methylobacterium extorquens PA1]
          Length = 991

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +    +++          A ++RL +
Sbjct: 634 SCGTRGHAPYDVVLTHGFVLDAKGEKMSKSRGNVVAPQNVIKESG-------ADILRLWV 686

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y + +    + +        K   +
Sbjct: 687 AAADYSDDLRIGPEIVKTFAETYRKLRNS 715


>gi|146085927|ref|XP_001465394.1| methionyl-tRNA synthetase [Leishmania infantum JPCM5]
 gi|134069492|emb|CAM67815.1| putative methionyl-tRNA synthetase [Leishmania infantum JPCM5]
          Length = 747

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 47/130 (36%), Gaps = 21/130 (16%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ DVL R  R    E    +V   TD   + +  A  +    P+ D
Sbjct: 220 VNASPHIGHVYSTLIVDVLGRYHRVKGEE---VFVMTGTDEHGQKVAEAAAKQGVSPM-D 275

Query: 95  AISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYE 147
             + ++S+  Q F +   D          +  R TN  P    L+Q     +   G  Y 
Sbjct: 276 FTTSVSSEFKQCFKEMNYDM--------NYFIRTTN--PTHEKLVQDIWKKLEAKGDIYL 325

Query: 148 ANNEIIFDTS 157
              E  +  S
Sbjct: 326 GKYEGWYSVS 335


>gi|326569879|gb|EGE19929.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis BC8]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|326566797|gb|EGE16936.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
 gi|326576710|gb|EGE26617.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|326563784|gb|EGE14035.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|326560980|gb|EGE11345.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis 7169]
 gi|326567363|gb|EGE17478.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis BC1]
          Length = 1094

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 720 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 779

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 780 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 832

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 833 R--------FLLANTDDFD 843


>gi|323449969|gb|EGB05853.1| hypothetical protein AURANDRAFT_66081 [Aureococcus anophagefferens]
          Length = 720

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
              + +   A E LV ER      +++  AD +R +L
Sbjct: 364 AFESDDALQAAEALVAERAKCRSDREYRRADELRDEL 400


>gi|320325637|gb|EFW81699.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320327080|gb|EFW83094.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330876900|gb|EGH11049.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 682

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 43/175 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L+         P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLD-------HLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                   K  +      +     +  + +DL        + K+   +++    +   NA
Sbjct: 361 --------KLGRGVDDLDLNLEDFVQKVNSDL--------IGKVVNIASRCAGFIHKGNA 404

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
              ++G       L      A   I    + R     M++  + AD     +  K
Sbjct: 405 --GVMGEANAAPELTDAFLAAAPSIADAYEARDFARAMRETMALADRANAYIAEK 457


>gi|296112727|ref|YP_003626665.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis RH4]
 gi|295920421|gb|ADG60772.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis RH4]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|289626587|ref|ZP_06459541.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|330867252|gb|EGH01961.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 682

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 43/175 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L+         P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLD-------HLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                   K  +      +     +  + +DL        + K+   +++    +   NA
Sbjct: 361 --------KLGRGVDDLDLNLEDFVQKVNSDL--------IGKVVNIASRCAGFIHKGNA 404

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
              ++G       L      A   I    + R     M++  + AD     +  K
Sbjct: 405 --GVMGEANAAPELTDAFLAAAPSIADAYEARDFARAMRETMALADRANAYIAEK 457


>gi|256811364|ref|YP_003128733.1| leucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
 gi|256794564|gb|ACV25233.1| leucyl-tRNA synthetase [Methanocaldococcus fervens AG86]
          Length = 938

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 41/113 (36%), Gaps = 8/113 (7%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
               DLI  H    I         E      + NG++ +EG+K+SKS G  + + E+ E 
Sbjct: 588 CSAKDLIPNHLTFYIFNHVAIFPEEFWPRGIVVNGYVTIEGKKLSKSKGPVLPVLEVAE- 646

Query: 295 KKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
                  + A V R  +       +  D   + +   + +L ++   +     
Sbjct: 647 ------KFDADVGRFYITTCAELPQDADIKFKEMENTKKVLERFYLFAKEVAE 693


>gi|222617797|gb|EEE53929.1| hypothetical protein OsJ_00508 [Oryza sativa Japonica Group]
          Length = 501

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF-ILEDYKNPD 449
           N+   +++   +R   L  K +  AD ++K +   GF  + D +   
Sbjct: 228 NVPQEVQRTAADRAEALMTKNYQRADELQKIILDAGFRQVTDSRGGQ 274


>gi|218530554|ref|YP_002421370.1| isoleucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
 gi|218522857|gb|ACK83442.1| isoleucyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
          Length = 991

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +    +++          A ++RL +
Sbjct: 634 SCGTRGHAPYDVVLTHGFVLDAKGEKMSKSRGNVVAPQNVIKESG-------ADILRLWV 686

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y + +    + +        K   +
Sbjct: 687 AAADYSDDLRIGPEIVKTFAETYRKLRNS 715


>gi|83859968|ref|ZP_00953488.1| valyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852327|gb|EAP90181.1| valyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 867

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 17/102 (16%)

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
           HHEN +            +NI I    L  +G KMSKS GN I   ++L+        + 
Sbjct: 533 HHENTV----------PWSNIAISGWCLASDGSKMSKSKGNVIDPIKMLD-------EYG 575

Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
              +R     +   +    +   L + + L++K    +    
Sbjct: 576 TDPVRYWTGTSRLGQDTALSPNTLKQGKRLVTKLWNAAKLAA 617


>gi|299538180|ref|ZP_07051465.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
 gi|298726382|gb|EFI66972.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
          Length = 544

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 12/123 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+   ++  D+L R  R     + V YV         I  RA QE      N     I
Sbjct: 17  HLGHVAALLPGDILARYYRQKG--EQVLYVSGSDCNGTPISIRAAQE------NTTTEAI 68

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDT 156
            +    +F +    L         R  A +H   +  L   ++ +   Y+    +   +T
Sbjct: 69  ANHYHDEFTRCFHDLGFTY-DLYTRTDAEHHHESVKTLFLQLLANNFLYKKKIEQAYCET 127

Query: 157 SSI 159
              
Sbjct: 128 DKQ 130


>gi|257486635|ref|ZP_05640676.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
 gi|330984847|gb|EGH82950.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
 gi|331010115|gb|EGH90171.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 682

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 43/175 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L+         P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLD-------HLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                   K  +      +     +  + +DL        + K+   +++    +   NA
Sbjct: 361 --------KLGRGVDDLDLNLEDFVQKVNSDL--------IGKVVNIASRCAGFIHKGNA 404

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
              ++G       L      A   I    + R     M++  + AD     +  K
Sbjct: 405 --GVMGEANAAPELTDAFLAAAPSIADAYEARDFARAMRETMALADRANAYIAEK 457


>gi|212635626|ref|YP_002312151.1| methionyl-tRNA synthetase [Shewanella piezotolerans WP3]
 gi|212557110|gb|ACJ29564.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
           subunit [Shewanella piezotolerans WP3]
          Length = 697

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A   + T+ ++ H G++ + G KMSKS G FI     L+
Sbjct: 310 HFIGKDIVYFHSLFWPAMLEGAGLRKPTS-VYAH-GYVTVNGAKMSKSKGTFIKARTYLD 367

Query: 294 TKKFGGRSWPAPVIRLA 310
                  +     +R  
Sbjct: 368 -------NLDPEYLRYY 377


>gi|46446681|ref|YP_008046.1| leucyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|60390710|sp|Q6MCC8|SYL_PARUW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|46400322|emb|CAF23771.1| probable leucyl-tRNA synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 845

 Score = 37.5 bits (86), Expect = 5.1,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 34/114 (29%), Gaps = 13/114 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R +R       V +            + A      I      +  
Sbjct: 48  HVGHVVGYTATDIIARYMRTKGYN--VMHPMGWDSFGLPAEQYA------IRTGTHPAES 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEAN 149
           T +N   + +    L      ++  AT   P      Q     +   G AYEA 
Sbjct: 100 TQENINNYRRQLRALGFSYDWNRELAT-SDPNYYKWTQWIFTKLYEKGLAYEAE 152


>gi|326577616|gb|EGE27493.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis O35E]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|326575204|gb|EGE25132.1| isoleucyl-tRNA synthetase [Moraxella catarrhalis CO72]
          Length = 1095

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 45/139 (32%), Gaps = 17/139 (12%)

Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
              L    D++  G D      ++ +  S           +  H   ++ +G K+SKS G
Sbjct: 721 RKELSNPADLYLEGSDQHRGWFQSSLLVSESIYGRPPYKQVLTHGFTVDAKGHKLSKSKG 780

Query: 284 NF--ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
           N      +++              ++RL +  + YR  +  + +       +  +   T 
Sbjct: 781 NTKGFEPSDIANKMGV-------DILRLWVGSSDYRYEMAVSKEGFDRTTDMYRRIRNTI 833

Query: 342 TSKGIIDPAVLSALYNDLN 360
                     L A  +D +
Sbjct: 834 R--------FLLANTDDFD 844


>gi|325845442|ref|ZP_08168735.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
 gi|325488548|gb|EGC90964.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
          Length = 655

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG A   +  D + R  R    +  V ++  + +   KI E+A++              
Sbjct: 20  HIGTAYTTVASDAMARYKRSRGFD--VRFLTGMDEHGQKIQEKAQEAGKEPQAYVDEIAD 77

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
            +K   + +  T            R T   H  +M+  I    + +G  Y+ + E ++ T
Sbjct: 78  AAKKLWEMMDITN-------DDFIRTTEKRH-EEMVEKIFAKFMENGDIYKGHYEGLYCT 129

Query: 157 SSIPNY 162
                Y
Sbjct: 130 PCESYY 135


>gi|298250513|ref|ZP_06974317.1| isoleucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
 gi|297548517|gb|EFH82384.1| isoleucyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
          Length = 1069

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 34/85 (40%), Gaps = 10/85 (11%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S          N+      L+ +G KMSKS GN +   ELLE       S+ A   R 
Sbjct: 580 AISTLLFDRPAYKNVICLGHILDAKGEKMSKSRGNAVNPWELLE-------SYGADSTRW 632

Query: 310 AMLMT--HYREPIDFTVQRLTEAEI 332
            M  +   Y    +F+ + + E + 
Sbjct: 633 FMCASAPPYNS-RNFSFELVNEMQR 656


>gi|282856536|ref|ZP_06265811.1| leucine--tRNA ligase [Pyramidobacter piscolens W5455]
 gi|282585657|gb|EFB90950.1| leucine--tRNA ligase [Pyramidobacter piscolens W5455]
          Length = 836

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 29/114 (25%), Gaps = 13/114 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D+  R LR       V +              A      I       + 
Sbjct: 51  HVGHPEGYTATDIYCRYLRMNGYN--VLHPMGFDSFGLPAENYA------IKTGTHPKVT 102

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEAN 149
           T KN   F      L           +   P+     Q     I   G AYEA 
Sbjct: 103 TEKNIDIFRAQIKSLGFSY-DWDREVSTCDPEYYKWTQWLFLQIFKKGLAYEAQ 155


>gi|114762252|ref|ZP_01441720.1| sensor histidine kinase RegB [Pelagibaca bermudensis HTCC2601]
 gi|114545276|gb|EAU48279.1| sensor histidine kinase RegB [Roseovarius sp. HTCC2601]
          Length = 463

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 15/92 (16%)

Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
           ++A+ +      A+ A       + K +DL  +  A+AH LG  +    L       IE 
Sbjct: 189 MNAMSD------ALIATQMALGRAQKLNDLGGVVAAAAHELGTPLATIKLTSA--ELIED 240

Query: 412 LVQER----LILLKMKKFSSADYIRKQLESKG 439
           L  +R         ++    AD  R  L S G
Sbjct: 241 L-DDRPDSQEDARLIRD--QADRCRDILRSMG 269


>gi|92118628|ref|YP_578357.1| isoleucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
 gi|91801522|gb|ABE63897.1| Isoleucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
          Length = 999

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  GRKMSKS GN +   +++           A ++RL +
Sbjct: 643 SCGTRGRAPYDVVLTHGFTLDENGRKMSKSLGNTVEPQKVIAQSG-------ADILRLWV 695

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             T Y +      + L        K   T
Sbjct: 696 CATDYADDQRIGPEILKNTVETYRKLRNT 724


>gi|15645767|ref|NP_207944.1| valyl-tRNA synthetase [Helicobacter pylori 26695]
 gi|2501065|sp|P56000|SYV_HELPY RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|2314306|gb|AAD08195.1| valyl-tRNA synthetase (valS) [Helicobacter pylori 26695]
          Length = 874

 Score = 37.5 bits (86), Expect = 5.2,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 61/185 (32%), Gaps = 27/185 (14%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 508 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 560

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN---TVS- 363
                       I  +   L   +   +K    ++   +   +        LN   T   
Sbjct: 561 ANLCATG---RDIKLSTTHLENNKNFANKLFNAASYLKLKQESFKDKER--LNEYQTPLG 615

Query: 364 --AIQALHKLARESTKNHDLLPIFNASA---HILGIEVCKE--HLNKNISIAIEKLVQER 416
             A   L+   +E+    D     +A+      L  E C      +K  + AI++L    
Sbjct: 616 RYAKSRLNSATKEARNALDNYRFNDATTLLYRFLWGEFCDWFIEFSKVENEAIDELGSVL 675

Query: 417 LILLK 421
              LK
Sbjct: 676 KEALK 680


>gi|310817225|ref|YP_003965189.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
 gi|308755960|gb|ADO43889.1| leucyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
          Length = 854

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 33/126 (26%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A         
Sbjct: 41  PYPSGRIHMGHVRNYTMGDVIARYKRATG--HAVLHPMGWDAFGMPAENAAMASGGH--- 95

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
                  T +N          L       +  AT    +  Q   L  +++     Y  N
Sbjct: 96  ---PKDWTYQNIADMRDQMKPLGFSIDWSREFATCDPEYYGQQQALFIDMLAKDLVYRKN 152

Query: 150 NEIIFD 155
             + +D
Sbjct: 153 AVVNWD 158


>gi|302755152|ref|XP_002961000.1| hypothetical protein SELMODRAFT_74165 [Selaginella moellendorffii]
 gi|300171939|gb|EFJ38539.1| hypothetical protein SELMODRAFT_74165 [Selaginella moellendorffii]
          Length = 347

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 7/37 (18%), Positives = 20/37 (54%)

Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
           V++R    + + +  AD +++Q+   G+ + D +  +
Sbjct: 195 VEKRRRARENRDYKKADMLQQQIFDAGYKVFDGRGSE 231


>gi|289647567|ref|ZP_06478910.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
          Length = 682

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 43/175 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L+         P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLD-------HLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                   K  +      +     +  + +DL        + K+   +++    +   NA
Sbjct: 361 --------KLGRGVDDLDLNLEDFVQKVNSDL--------IGKVVNIASRCAGFIHKGNA 404

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
              ++G       L      A   I    + R     M++  + AD     +  K
Sbjct: 405 --GVMGEANAAPELTDAFLAAAPSIADAYEARDFARAMRETMALADRANAYIAEK 457


>gi|290890338|ref|ZP_06553416.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
 gi|189030331|sp|Q04FL2|SYL_OENOB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|290480023|gb|EFD88669.1| hypothetical protein AWRIB429_0806 [Oenococcus oeni AWRIB429]
          Length = 810

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 36/147 (24%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  +E+++       S+ A  +R   M M    +   ++ + L  
Sbjct: 576 LGTNHEKMSKSKGNVVNPDEIVD-------SYGADALRVYEMFMGPLTQSKPWSTESLAG 628

Query: 330 AEILLSKWPQTSTSKGI-------------IDPAV----------LSALYNDLNTVSAIQ 366
               L +  +  TS G              +D              +A+    NT  AI 
Sbjct: 629 IRRYLDRVWRIFTSDGDGINPIIVSENDHKLDKIFNQTVKKVTEDYAAMR--FNT--AIS 684

Query: 367 ALHKLARESTKNHDL-LPIFNASAHIL 392
            +     E+ K   L     NA   +L
Sbjct: 685 QMMVFINETFKAEKLPKKYMNAFLQLL 711


>gi|32473761|ref|NP_866755.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1]
 gi|68565994|sp|Q7URP3|SYM_RHOBA RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|32444297|emb|CAD74295.1| methionyl-tRNA synthetase [Rhodopirellula baltica SH 1]
          Length = 679

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 8/48 (16%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            + IH GFLN+ G+KMSKS+G F+     L       +      +R  
Sbjct: 315 KVHIH-GFLNVNGKKMSKSDGTFVKAETFL-------KHIDPSALRYF 354


>gi|89070618|ref|ZP_01157898.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
 gi|89043765|gb|EAR49967.1| leucyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
          Length = 857

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 38/146 (26%), Gaps = 14/146 (9%)

Query: 16  TEFQ-AIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
             F    +    + YV    P      HIG+ R   + DV+ R  +       V +    
Sbjct: 21  ETFVATREGDKPKYYVLEMFPYPSGRIHIGHVRNYTMGDVIARYKKATG--HNVLHPMGF 78

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
                     A                T  N    V     L       +  AT    + 
Sbjct: 79  DAFGMPAENAAMASGGH------PKDWTYGNIDTMVGQMKPLGFGLDWSRMFATCDPEYY 132

Query: 130 PQMIYLIQNIILHGHAYEANNEIIFD 155
            Q   L  + +  G  Y  N  + +D
Sbjct: 133 GQQQALFLDFLDAGLVYRKNAVVNWD 158


>gi|121602880|ref|YP_988442.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
 gi|166230611|sp|A1UR39|SYL_BARBK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|120615057|gb|ABM45658.1| leucyl-tRNA synthetase [Bartonella bacilliformis KC583]
          Length = 875

 Score = 37.1 bits (85), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 22/83 (26%), Gaps = 8/83 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A Q       
Sbjct: 43  PYPSGRIHMGHVRNYTMGDVVARYKRAKG--MNVLHPMGWDAFGMPAENAAMQNKVH--- 97

Query: 93  NDAISIITSKNTQQFVKDTTRLA 115
                  T +N     K   +L 
Sbjct: 98  ---PKAWTYQNIAAMRKQLQKLG 117


>gi|171694870|ref|XP_001912359.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947677|emb|CAP59839.1| unnamed protein product [Podospora anserina S mat+]
          Length = 982

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 53/157 (33%), Gaps = 29/157 (18%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE---------------TKKFGGRS 301
            +     +  H   L+ +G+KMSKS GN I+ NE+++                K     +
Sbjct: 602 GLSPFKTLITHGFTLDKDGKKMSKSLGNIISANEVMDGSLLFEPPQAGQPQGRKNREPEA 661

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
                +RL +  + Y   I      L     +L K+         I      ++  D  T
Sbjct: 662 LGPDALRLWIASSDYTGDIILGKPVLRTVHQVLLKYR-------TIIKMFTGSMQPDART 714

Query: 362 V-------SAIQALHKLARESTKNHDLLPIFNASAHI 391
                    A+  L  + +E  K +D      A A +
Sbjct: 715 APLTVADHIALIQLKDVMQEVGKYYDNYEFNKAQAAL 751


>gi|167947058|ref|ZP_02534132.1| Methionyl-tRNA synthetase, class Ia [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 367

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 8/61 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
           Q        K   ++ H GFL ++G+KMSKS G FI     L+             +R  
Sbjct: 292 QCWRGPGFRKPTAVFAH-GFLTVDGQKMSKSRGTFIKARTYLD-------HLNPEYLRYY 343

Query: 311 M 311
            
Sbjct: 344 F 344



 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 9/109 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
              HIG+    I  D+  R  +         YV         I+ RARQE          
Sbjct: 3   GPIHIGHLVEYIQTDIWARFQKMRG--HQCHYVCADDAHGTPIMLRARQE------GIEP 54

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGH 144
             + ++ +++   D          +    +    ++   I +     GH
Sbjct: 55  EALIARVSEEHQADFAAFRIGFDNYHSTHSEENRELSKTIYERNRDAGH 103


>gi|56750417|ref|YP_171118.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81299951|ref|YP_400159.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
 gi|56685376|dbj|BAD78598.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
 gi|81168832|gb|ABB57172.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
          Length = 525

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 39/127 (30%), Gaps = 15/127 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V D  HIG+A   I  D + R  R       V  +    +   KI   A +       + 
Sbjct: 14  VNDVPHIGSAYTTIAADAIARFHRLQG--DRVLMITGSDEHGQKIQRTAEKNGKPPQEHC 71

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ----NIILHGHAYEANN 150
                         +D  +L  +      R T+  P+   +++     +   G  Y    
Sbjct: 72  NA-------IVARFQDLWQLLNIRYDRFSRTTD--PRHQAIVEVFYRRVEAQGDIYVGRQ 122

Query: 151 EIIFDTS 157
           +  +  +
Sbjct: 123 QGWYCVA 129


>gi|119775714|ref|YP_928454.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
 gi|119768214|gb|ABM00785.1| leucyl-tRNA synthetase [Shewanella amazonensis SB2B]
          Length = 864

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 20/135 (14%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  +     KMSKS  N I    ++E        + A  +RL M+      P    +++ 
Sbjct: 614 HELVYTGMSKMSKSKNNGIDPQVMVE-------KYGADTVRLFMMFA---SPPELTLEWQ 663

Query: 324 VQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
              +  A   + +  + +   ++    +   +SAL  D  T+   + LHK   + T +  
Sbjct: 664 ESGVEGAHRFIKRLWKLASEYSAAPATEALDVSALNADQKTLR--RELHKTIAKVTDDLG 721

Query: 381 LLPIFN-ASAHILGI 394
              +FN A A ++ +
Sbjct: 722 RRQMFNTAVAAVMEL 736


>gi|303229591|ref|ZP_07316379.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
 gi|302515716|gb|EFL57670.1| methionine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
          Length = 649

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 7/48 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             +G++ ++G KMSKS GN I  N L++T       + A  +R  +L 
Sbjct: 289 FGHGWMIVDGTKMSKSLGNVIDPNPLIDT-------YGADSLRYYLLS 329


>gi|254500225|ref|ZP_05112376.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
 gi|222436296|gb|EEE42975.1| valyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
          Length = 979

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      + Q     +      ++I++  ++  G+KMSKS GN +   E+
Sbjct: 577 DVLITGFDIIFFWVARMMMQGIHFMKEVPFHTVYINSIVVDKNGKKMSKSLGNVLDPLEM 636

Query: 292 LETKKFGGRSWPAPVIRLAMLM--THYREPIDFTVQRLTEAEILLSKWPQTST 342
           +        S+ A   R A+       R  +  + Q     +   +K    + 
Sbjct: 637 IA-------SYGADATRYALASQEVQGRRTLRMSDQAAEGGQRFATKLWNAAR 682


>gi|218461098|ref|ZP_03501189.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
          Length = 272

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 44/126 (34%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R     K V ++    +   K+ + AR E            
Sbjct: 20  PHIGHAYELIATDAMARYQRLDG--KDVFFLTGTDEHGQKMQQTARAE------GIEPQA 71

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  +N+ +F +    L   +     R T   H      + + +  +G  Y+ +    +  
Sbjct: 72  LADRNSGEF-QAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWYSV 130

Query: 157 SSIPNY 162
                Y
Sbjct: 131 RDEAYY 136


>gi|149917711|ref|ZP_01906207.1| lysyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
 gi|149821493|gb|EDM80893.1| lysyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
          Length = 543

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 2/47 (4%)

Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYG--EKCVTYVRNITDID 76
          G T     H+GN R +I  D++ R LR   G   K V ++ +  D D
Sbjct: 34 GITPSGVVHVGNFREIITVDLVARALRDRLGEQGKKVRFIYSWDDFD 80


>gi|49473906|ref|YP_031948.1| isoleucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
 gi|81647236|sp|Q6G0K6|SYI_BARQU RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|49239409|emb|CAF25747.1| Isoleucyl-tRNA synthetase [Bartonella quintana str. Toulouse]
          Length = 971

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 12/76 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G+KMSKS GN +   E+++T         A + RL +
Sbjct: 618 SCGTRACSPYKAVITHGFTLDENGKKMSKSLGNTVVPQEIIKTSG-------ADIFRLWV 670

Query: 312 LMTHYREPIDFTVQRL 327
           + T Y     +  QRL
Sbjct: 671 MTTDY-----WEDQRL 681


>gi|15612145|ref|NP_223797.1| valyl-tRNA synthetase [Helicobacter pylori J99]
 gi|11135055|sp|Q9ZK61|SYV_HELPJ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|4155674|gb|AAD06660.1| VALYL-TRNA SYNTHETASE [Helicobacter pylori J99]
          Length = 872

 Score = 37.1 bits (85), Expect = 5.3,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 40/137 (29%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R  +
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 312 L------------MTHYREPIDFTV-------------------QRLTEAEILLSKWPQT 340
                         TH     +F                     +RL E +  L ++   
Sbjct: 559 ANLCATGRDIKLSTTHLENNKNFANKLFNAASYLKLKQESFKDKERLNEYQTALGRY--A 616

Query: 341 STSKGIIDPAVLSALYN 357
            +   ++   V +AL N
Sbjct: 617 KSRLNLVTKEVRNALDN 633


>gi|307941705|ref|ZP_07657060.1| isoleucine--tRNA ligase [Roseibium sp. TrichSKD4]
 gi|307775313|gb|EFO34519.1| isoleucine--tRNA ligase [Roseibium sp. TrichSKD4]
          Length = 986

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 27/169 (15%), Positives = 59/169 (34%), Gaps = 36/169 (21%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   +  +GRKMSKS GN +   +++       + + A ++RL +
Sbjct: 632 SCGTRGHAPYDAVLTHGFTMAEDGRKMSKSLGNQVFPQDII-------KQYGADILRLWV 684

Query: 312 LMTHYREPIDFTVQRL--------TEAEILLS---KWPQTSTSKGIIDPAVLSALYNDLN 360
             T       +  QRL         ++   L    +W   S +    +      +     
Sbjct: 685 ASTD-----SWEDQRLGQEIIKTNVDSYRKLRNTLRWMLGSLAHATGEEVAFDDM----- 734

Query: 361 TVSA-------IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                      +  L ++ R+  ++ D   +F+     + +E+   + +
Sbjct: 735 -PELERLMLHRLSELDQMVRQGYQDFDYKKVFHQLFTFMTVELSAFYFD 782


>gi|289191087|gb|ADC93656.1| aminoacyl tRNA synthetase AK-2 [synthetic construct]
          Length = 860

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y    + Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSVSPYPSGRLHMGHVRNYTIGDVIARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKMLG 116


>gi|257877587|ref|ZP_05657240.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
 gi|257811753|gb|EEV40573.1| isoleucyl-tRNA synthetase [Enterococcus casseliflavus EC20]
          Length = 929

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 15/112 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I  S   + +     +      L+ EGRKMSKS GN I   +++           A ++R
Sbjct: 563 ITTSVAINGVAPYKAVLSQGFTLDGEGRKMSKSLGNTIAPEKVINQMG-------ADILR 615

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
           L +    Y   +  ++  L +   +  K   T           L A  ND +
Sbjct: 616 LWVSSVDYEADVRVSMDILNQVSEVYRKIRNTMR--------FLLANTNDFD 659


>gi|220935785|ref|YP_002514684.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997095|gb|ACL73697.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 680

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+ + H     A    A     TA ++ H GFL + G+KMSKS G FI     L+
Sbjct: 296 HFIGKDIAYFHTLFWPAMLTGAGFRAPTA-VFCH-GFLTVNGQKMSKSRGTFIKARTYLD 353

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 354 -------HLNPEYLRYYF 364


>gi|189083227|sp|A1S8S8|SYL_SHEAM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 859

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 54/135 (40%), Gaps = 20/135 (14%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           +  +     KMSKS  N I    ++E        + A  +RL M+      P    +++ 
Sbjct: 609 HELVYTGMSKMSKSKNNGIDPQVMVE-------KYGADTVRLFMMFA---SPPELTLEWQ 658

Query: 324 VQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
              +  A   + +  + +   ++    +   +SAL  D  T+   + LHK   + T +  
Sbjct: 659 ESGVEGAHRFIKRLWKLASEYSAAPATEALDVSALNADQKTLR--RELHKTIAKVTDDLG 716

Query: 381 LLPIFN-ASAHILGI 394
              +FN A A ++ +
Sbjct: 717 RRQMFNTAVAAVMEL 731


>gi|114571496|ref|YP_758176.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
 gi|122314962|sp|Q0AKF5|SYL_MARMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|114341958|gb|ABI67238.1| leucyl-tRNA synthetase [Maricaulis maris MCS10]
          Length = 865

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 31/104 (29%), Gaps = 14/104 (13%)

Query: 18  FQAIDP----SNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
           F+AI P    +  + YV    P      H+G++R   + DV+ R  R    +  V +   
Sbjct: 23  FKAIGPSASNNKPKYYVLEMFPYPSGRIHVGHSRNYTMGDVVARYKRARGFD--VLHPMG 80

Query: 72  ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                      AR               T  N         RL 
Sbjct: 81  WDAFGLPAENAARDRGVH------PGAWTHDNIDAMRGQLQRLG 118


>gi|15888029|ref|NP_353710.1| isoleucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81496260|sp|Q8UHJ6|SYI_AGRT5 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|15155647|gb|AAK86495.1| isoleucyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 967

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 66/189 (34%), Gaps = 36/189 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D++  G D       + + +SC          +  H   ++ +GRK SKS GN +   ++
Sbjct: 596 DVYLEGSDQHRGWFHSSLLESCATRGRAPYNAVVTHGFTMDEQGRKQSKSLGNVVAPQDV 655

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLS---KWPQT 340
           ++          A ++RL ++ T Y     +  QRL         +A   L    +W   
Sbjct: 656 MKESG-------ADILRLWVMTTDY-----WEDQRLGKAIIQTNIDAYRKLRNTVRWMLG 703

Query: 341 STSKGIIDPAVLSALYNDLNTVSA-------IQALHKLARESTKNHDLLPIFNASAHILG 393
           + +    +    +    DL            +  L K+ R+     D   I  A      
Sbjct: 704 TLAHDNGEEIAYA----DL--PELEKLVLHRLSELDKVVRDGYDAFDFKKITRALIDFAN 757

Query: 394 IEVCKEHLN 402
           +E+   + +
Sbjct: 758 VELSAFYFD 766


>gi|332638051|ref|ZP_08416914.1| glutamyl-tRNA synthetase [Weissella cibaria KACC 11862]
          Length = 498

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 46/132 (34%), Gaps = 31/132 (23%)

Query: 23  PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---- 77
              IR+ Y   PT     H+GNAR       L+  L   + +    +V  I D D     
Sbjct: 6   EKKIRVRYAPSPT--GHLHVGNART-----ALFNWLFARHYK--GEFVIRIEDTDQARNI 56

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP-RATNHIPQMIYLI 136
              E+++ ++ +    D      +                   + P R +  +     LI
Sbjct: 57  ADGEKSQLDNLAWLGLDWDESPAN----------------PGEYGPYRQSERMDIYKPLI 100

Query: 137 QNIILHGHAYEA 148
           Q ++  G AY++
Sbjct: 101 QELLDRGLAYKS 112


>gi|330889575|gb|EGH22236.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 682

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 53/175 (30%), Gaps = 43/175 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L+         P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLD-------HLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                   K  +      +     +  + +DL        + K+   +++    +   NA
Sbjct: 361 --------KLGRGVDDLDLNLEDFVQKVNSDL--------IGKVVNIASRCAGFIHKGNA 404

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
              ++G       L      A   I    + R     M++  + AD     +  K
Sbjct: 405 --GVMGEANAAPELTDAFLAAAPSIADAYEARDFARAMRETMALADRANAYIAEK 457


>gi|266625215|ref|ZP_06118150.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
 gi|288862886|gb|EFC95184.1| valine--tRNA ligase [Clostridium hathewayi DSM 13479]
          Length = 464

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 16/167 (9%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              + +H    + EGRKMSKS GN I   E+
Sbjct: 68  DVLVTGYDIIFFWVIRMVFSGIEHTGQLPFNTVLMHGLVRDSEGRKMSKSLGNGIDPLEV 127

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           ++        + A  +R+ ++  +   P   + F  +R+  +    +K W  +      I
Sbjct: 128 ID-------KYGADALRMTLITGN--APGNDMRFYWERVEASRNFANKVWNASRFIMMNI 178

Query: 348 DPAVLS-ALYNDLNTVSA--IQALHKLARESTKNHDLLPIFNASAHI 391
           + A  S A  +DL       +   + LAR+ T N D   +  A   +
Sbjct: 179 EKAPDSRAELSDLTMADKWILSKANSLARDVTDNLDKFELGIALQKV 225


>gi|323342873|ref|ZP_08083105.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463985|gb|EFY09179.1| valine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 861

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 33/79 (41%), Gaps = 7/79 (8%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           +   G D+IF        Q+          ++ IH    + +GRKMSKS GN +   +++
Sbjct: 476 VLVTGYDIIFFWVARMAFQARYFTNSRPFEDVLIHGLIRDQDGRKMSKSLGNGVDPMDVI 535

Query: 293 ETKKFGGRSWPAPVIRLAM 311
           ET       +    +R  +
Sbjct: 536 ET-------YGVDALRYFL 547


>gi|261402968|ref|YP_003247192.1| leucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
 gi|261369961|gb|ACX72710.1| leucyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
          Length = 942

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 58/186 (31%), Gaps = 35/186 (18%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
               DLI  H    I         E      + NG++ +EG+K+SKS G  + + E+ E 
Sbjct: 589 CSAKDLIPNHLTFYIFNHVAIFPEEHWPRGIVVNGYVTIEGKKLSKSKGPVLPVLEVAE- 647

Query: 295 KKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWP-------------QT 340
                  + A V R  +       +  D   + +   + +L +               + 
Sbjct: 648 ------KFGADVGRFYITTCAELPQDADIKFKEMENTKKVLERIYFLTKEVADRKKTEKV 701

Query: 341 STSKGIIDPAVLSALY----------NDLNTVSA----IQALHKLARESTKNHDLLPIFN 386
                 ID  +LS L           ++     A     Q L  L     +  D L +  
Sbjct: 702 KEELTYIDQWLLSVLNRAIKQYSEFMDNFELRKAGILIYQLLDNLKWYKRRGGDNLNVLE 761

Query: 387 ASAHIL 392
               +L
Sbjct: 762 EFLEVL 767


>gi|240104101|ref|YP_002960410.1| lysyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
 gi|239911655|gb|ACS34546.1| Lysyl-tRNA synthetase (lysS) [Thermococcus gammatolerans EJ3]
          Length = 525

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 31/105 (29%), Gaps = 19/105 (18%)

Query: 32  GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           G T   + HIGN R      ++   LR    +     VR+I   DD    R   ++    
Sbjct: 27  GITPSGYVHIGNFREFFTAYIVGHALRDRGKK-----VRHIHMWDDYDRFRKVPKNVPQE 81

Query: 92  IND--------------AISIITSKNTQQFVKDTTRLACLAPTHQ 122
             +                        ++F ++  RL   A    
Sbjct: 82  WREHLTKPVREVPDPWGCHDSYAEHFIEKFEEEVKRLGIEADFLY 126


>gi|256826639|ref|YP_003150598.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
 gi|256582782|gb|ACU93916.1| leucyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
          Length = 861

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 33/205 (16%), Positives = 64/205 (31%), Gaps = 60/205 (29%)

Query: 259 EKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHY 316
           E   N+ +  G +    G  MSKS GN I   +++         + A  +R   + M   
Sbjct: 587 EPFTNL-LTQGMVKDAHGETMSKSKGNVIAPEDMIA-------HYGADAVRTYILFMAPP 638

Query: 317 REPIDFTVQRLTEAEILLSK-WPQTSTSKG------IIDPAVLSA--------------- 354
            + + +  + L      L++ W Q +   G      + DP   +A               
Sbjct: 639 DKDLQWDEEGLAGIYRFLTRVWRQVNDLMGKAGESTLFDPTAQNAGKASSVEQAAKVLRR 698

Query: 355 ------------LY-NDLNTVSAIQALHKLARES------------TKNHDLLPIFNASA 389
                       +  N  NT  AI A+ +L+                 + +L  +    A
Sbjct: 699 ERHRVVGKVTNDMERNSFNT--AIAAIMELSNAVGSYVRVASAEMRAADPELAALDREVA 756

Query: 390 HILGIEVCKEHLNKNISIAIEKLVQ 414
            +L +++             E ++ 
Sbjct: 757 EVL-VKLLSPMAPHWADELWETVLD 780


>gi|116490881|ref|YP_810425.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
 gi|116091606|gb|ABJ56760.1| leucyl-tRNA synthetase [Oenococcus oeni PSU-1]
          Length = 829

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 50/147 (34%), Gaps = 36/147 (24%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTE 329
           L     KMSKS GN +  +E+++       S+ A  +R   M M    +   ++ + L  
Sbjct: 595 LGTNHEKMSKSKGNVVNPDEIVD-------SYGADALRVYEMFMGPLTQSKPWSTESLAG 647

Query: 330 AEILLSKWPQTSTSKGI-------------IDPAV----------LSALYNDLNTVSAIQ 366
               L +  +  TS G              +D              +A+    NT  AI 
Sbjct: 648 IRRYLDRVWRIFTSDGDGINPIIVSENDHKLDKIFNQTVKKVTEDYAAMR--FNT--AIS 703

Query: 367 ALHKLARESTKNHDL-LPIFNASAHIL 392
            +     E+ K   L     NA   +L
Sbjct: 704 QMMVFINETFKAEKLPKKYMNAFLQLL 730


>gi|332020768|gb|EGI61172.1| Isoleucyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
          Length = 933

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 3/90 (3%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR--SWPAPVIRL 309
           S         + +++H   ++ +  KMSKS GN I    +++  K   +  ++    +R 
Sbjct: 581 SIALQERSPYSALFVHGFAVDDKASKMSKSVGNVINPETIIKGGKNLSKDPAYGVDTLRW 640

Query: 310 AMLMTHY-REPIDFTVQRLTEAEILLSKWP 338
            +         +  T   L ++   + K  
Sbjct: 641 WIASHGCQHSQVPVTTALLRQSHESIQKMR 670


>gi|295102463|emb|CBL00008.1| valyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
          Length = 901

 Score = 37.1 bits (85), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 35/91 (38%), Gaps = 10/91 (10%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML- 312
                     + IH    + +GRKMSKS GN I   E++         + A  +R  ++ 
Sbjct: 526 AYTGKAPFDTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIA-------QYGADALRFMLVD 578

Query: 313 -MTHYREPIDFTVQRLTEAEILLSKWPQTST 342
             T     + ++ +++  A    +K    + 
Sbjct: 579 GSTP-GNDMRYSEKKVEAARNFANKLWNATR 608


>gi|325478556|gb|EGC81668.1| valine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
          Length = 879

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 71/208 (34%), Gaps = 37/208 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           DI   G D+IF      I  S          ++       + +GRKMSKS GN +   ++
Sbjct: 475 DILVTGYDIIFFWVIRMIFSSMYNTSKVPFHHVLFTGLIRDPQGRKMSKSLGNGVDPIDV 534

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQTSTSKGII 347
           +         + A  +R  ++  +   P   + +  +R+  +    +K W  +      I
Sbjct: 535 VN-------EYGADALRFTLITGN--SPGNDMRYDEKRILASRNFANKLWNASRFVLMNI 585

Query: 348 DPAVLSALYNDLNTVSA---------IQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
           +        +DLN             ++ L+ +  + +KN D   I  A+  I       
Sbjct: 586 EEG------DDLNFSGENLELEDKWILKRLNDVIVDVSKNLDKYEIGLAADRI-----ED 634

Query: 399 EHLNKNISIAIE----KLVQERLILLKM 422
              N+     IE    +L  E       
Sbjct: 635 FIWNEYCDWYIEFAKIRLYGEDEDAKAN 662


>gi|220920435|ref|YP_002495736.1| isoleucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
 gi|219945041|gb|ACL55433.1| isoleucyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
          Length = 989

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +   +++           A ++RL +
Sbjct: 631 SCGTRGRAPYDVVLTHGFVLDPKGEKMSKSRGNVVAPQDVIAASG-------ADILRLWV 683

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +      +        K   +
Sbjct: 684 AASDYTDDLRIGPPIIKTFSETYRKLRNS 712


>gi|55379286|ref|YP_137136.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
 gi|55232011|gb|AAV47430.1| leucyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
          Length = 892

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 47/135 (34%), Gaps = 17/135 (12%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI-----EKTANIWIHNGFLNLEGRKMSKSNGN 284
             D++ GG +    H       +     I     E+     I+ G +   G KMSKS GN
Sbjct: 533 PVDVYVGGEEHAVLHLLYIRFFTRALSDIGLLDREEPVERLINQGTVLHSGEKMSKSKGN 592

Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTS 343
            I  +E           + A   RL +L   H  +  ++TV+ ++ A        +  T 
Sbjct: 593 DIAPHE-----------YGAETTRLFVLSAAHPSQDFEWTVKDVSTAYDFQQTLYRLVTE 641

Query: 344 KGIIDPAVLSALYND 358
                     +  +D
Sbjct: 642 YTDRTETRTESTDHD 656


>gi|330954239|gb|EGH54499.1| isoleucyl-tRNA synthetase [Pseudomonas syringae Cit 7]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|226498952|ref|NP_001143206.1| hypothetical protein LOC100275709 [Zea mays]
 gi|195615788|gb|ACG29724.1| hypothetical protein [Zea mays]
          Length = 756

 Score = 37.1 bits (85), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 49/138 (35%), Gaps = 19/138 (13%)

Query: 318 EPIDFTVQRLTEAEI-LLSKWPQTSTSK---GIIDPAVLSALYNDLNTVSAIQALHK--- 370
             I  + QR   AE      W +    +     ++   + AL +D NT S I+ L++   
Sbjct: 375 SDIVVSGQRADAAEKETADLWTEVEGLRLKLHTVEEEKMEALNSDKNTSSEIETLNEQKN 434

Query: 371 -LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
            LA E   + D L     +   L     +E   ++     + L+++  I           
Sbjct: 435 QLADELEASKDELEKIKKAMEGLA-SALQEMSAESREAQEKYLLKQDEIERAQ------- 486

Query: 430 YIRKQLESKGFILEDYKN 447
               QLE     L++ K 
Sbjct: 487 ---AQLEELNLSLKNIKE 501


>gi|323699457|ref|ZP_08111369.1| valyl-tRNA synthetase [Desulfovibrio sp. ND132]
 gi|323459389|gb|EGB15254.1| valyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
          Length = 888

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 57/143 (39%), Gaps = 17/143 (11%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-TH 315
                 +++IH    + +G+KMSKS GN I   +++         + A  +R  +     
Sbjct: 506 GEVPFHHVYIHALVRDEQGKKMSKSTGNVIDPLDMIG-------KYGADALRFTLTSFAA 558

Query: 316 YREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQ---ALHKL 371
               I  + QR+   +  ++K W  T  +   +   +  A   D++  S +     LH+L
Sbjct: 559 MGRDIKLSEQRIEGYKHFMNKVWNATRFAMMNLPDVIPDA---DVHEASDLADRWILHRL 615

Query: 372 --ARESTKNHDLLPIFNASAHIL 392
              +E+  +      FN  A  L
Sbjct: 616 EEVKETVASATNDYRFNEIAQTL 638


>gi|313232534|emb|CBY19204.1| unnamed protein product [Oikopleura dioica]
          Length = 1203

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 45/127 (35%), Gaps = 23/127 (18%)

Query: 323  TVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR----ESTK 377
            + Q L EA+  L K     S ++  ++           N   AI  L+K+ +    E  +
Sbjct: 990  SEQNLHEAKAELEKALDDLSKTQEKLEDHR--------NDSDAI--LYKMKKTYQEEIDE 1039

Query: 378  NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE------RLILLKMKKFSSADY- 430
               ++     SA           L K +   IE L +       R  L K    + AD  
Sbjct: 1040 LSSVIATLRESAENKTSSADDSELVKKLQAEIEDLNENLKDKLFRSKLRKQLDTAKADAA 1099

Query: 431  -IRKQLE 436
             +R +LE
Sbjct: 1100 TLRNKLE 1106


>gi|289422687|ref|ZP_06424527.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
 gi|289156866|gb|EFD05491.1| valine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
          Length = 883

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 77/204 (37%), Gaps = 43/204 (21%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
             +   ++ IH    + EGRKMSKS GN I   E+++        + A  +R  ++  + 
Sbjct: 505 NDKPFEHVLIHGLVRDSEGRKMSKSLGNGIDPLEIID-------QFGADALRFTLITGN- 556

Query: 317 REP---IDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSALYNDLNTVSA-- 364
             P   + F ++R+  A    +K    S         + ++D     A+  DL       
Sbjct: 557 -SPGNDMRFYMERVEFARNFNNKLWNASRFVFMNLEDESLLDGLTREAVEKDLTLADKWI 615

Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH---LNKNISIAIEKLVQERL--IL 419
           I   +++  E   N D           LGI + K +    ++     IE +V+ RL    
Sbjct: 616 ISRANRIVDEVNTNMDKFE--------LGIALQKSYEFTWSEYCDWYIE-IVKPRLYGDD 666

Query: 420 LKMKKFSSADYIRKQLESKGFILE 443
              K        R  L +  ++LE
Sbjct: 667 RDAK--------RAALYTLTYVLE 682


>gi|290956986|ref|YP_003488168.1| ATP-dependent DNA helicase [Streptomyces scabiei 87.22]
 gi|260646512|emb|CBG69609.1| putative ATP-dependent DNA helicase [Streptomyces scabiei 87.22]
          Length = 1631

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 26/63 (41%), Gaps = 10/63 (15%)

Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS--ADYIR-------KQLE 436
              A +LG    +E L+  +   +E+ +Q R    + K  +   AD +R        +L 
Sbjct: 914 RLLAELLGQAELRELLDAEVLAELERELQWRTDDRRAKD-AEGVADLLRLLGPLTDAELA 972

Query: 437 SKG 439
            +G
Sbjct: 973 ERG 975


>gi|224373264|ref|YP_002607636.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
 gi|223589648|gb|ACM93384.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
          Length = 635

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 8/63 (12%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   +G KMSKS GN I   ++ +       ++     R  ML    +    DF+ + 
Sbjct: 293 HGWWTRDGEKMSKSKGNVINPKDVAD-------AYGLENFRYFMLREVPFGADGDFSEKA 345

Query: 327 LTE 329
           L +
Sbjct: 346 LID 348


>gi|15612616|ref|NP_240919.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
 gi|25009402|sp|Q9KGK8|SYM_BACHD RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|10172665|dbj|BAB03772.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
          Length = 660

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 37/128 (28%), Gaps = 11/128 (8%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
           D  HIG+A   +  D + R  R          V  +T  D+      + E  +       
Sbjct: 19  DKLHIGHAYTTVAGDAMARYKRLRGYN-----VMYLTGTDEH---GQKIEQKAEAKGLTP 70

Query: 97  SIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIF 154
                +          +L         R T   HI  +  + + ++  G  Y  + E  +
Sbjct: 71  KQFVDEIVSGIQDLWKKLDISYDDF-IRTTEERHIKVVQQIFEQLLDQGDIYLGDYEGWY 129

Query: 155 DTSSIPNY 162
                  Y
Sbjct: 130 SIPDETFY 137


>gi|299143925|ref|ZP_07037005.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518410|gb|EFI42149.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 1031

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 10/90 (11%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S     +    N+ +++  L+  G+KMSKS GN +   EL +        + A  +R
Sbjct: 561 LAISTYMTGVTPYKNVLVNDLILDKFGKKMSKSKGNTVQPFELFD-------KYGADTVR 613

Query: 309 LAML--MTHYREPIDFTVQRLTEAEILLSK 336
             ++     +  P  F    L EAE    +
Sbjct: 614 WYLMYVSPPW-APTKFDEDGLREAESKFFR 642


>gi|255020628|ref|ZP_05292690.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
 gi|254969864|gb|EET27364.1| Methionyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
          Length = 680

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I+ H     A    A     TA I+ H GF+ + G KMSKS G  IT    LE
Sbjct: 287 HFIGKDIIYFHALFWPAMLKGAGYRLPTA-IFTH-GFMTVNGAKMSKSRGTSITAARYLE 344

Query: 294 TKKFGGRSWPAPVIRLAMLM 313
             +          +R     
Sbjct: 345 RLE-------PEFLRYYFAS 357



 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 28/88 (31%), Gaps = 13/88 (14%)

Query: 29  YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
           Y  GP      H+G+       D+  R  +         YV         I+ RA+ E  
Sbjct: 13  YANGP-----LHLGHLVEYTQTDIWVRYHKLRG--HDCVYVCADDAHGTPIMLRAQSE-- 63

Query: 89  SIPINDAISIITSKNTQQFVKDTTRLAC 116
                 +   +  +  ++ ++D T    
Sbjct: 64  ----GISPETLVERMQKEHLRDFTAFGI 87


>gi|23009422|ref|ZP_00050476.1| COG0060: Isoleucyl-tRNA synthetase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 570

 Score = 37.1 bits (85), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +    +++          A ++RL +
Sbjct: 430 SCGTKGYAPYDVVLTHGFVLDAKGEKMSKSRGNVVAPQNVIKESG-------ADILRLWV 482

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y + +    + +        K   +
Sbjct: 483 AAADYSDDLRIGPEIVKTFAETYRKLRNS 511


>gi|331018368|gb|EGH98424.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|330971959|gb|EGH72025.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
           M302273PT]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|330961575|gb|EGH61835.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|330901414|gb|EGH32833.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
           M301072PT]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|312864508|ref|ZP_07724739.1| methionine--tRNA ligase [Streptococcus downei F0415]
 gi|311099635|gb|EFQ57848.1| methionine--tRNA ligase [Streptococcus downei F0415]
          Length = 669

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 39/120 (32%), Gaps = 11/120 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   I  DVL R  R    +     VR +T +D+      + +  +  +       
Sbjct: 20  HIGSAYTTIACDVLARYKRMMNYD-----VRYLTGLDEH---GQKIQQKAQEVGITPQEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
                +   +    L         R T+  H   +  + + ++  G  Y       +  S
Sbjct: 72  VDGMAKDVKELWELLNISY-DQFIRTTDDFHEEVVAKIFEKLLAQGDIYLGEYTGWYSVS 130


>gi|302185239|ref|ZP_07261912.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|237801850|ref|ZP_04590311.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331024708|gb|EGI04764.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|213971063|ref|ZP_03399183.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
 gi|301384214|ref|ZP_07232632.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
 gi|302060862|ref|ZP_07252403.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
 gi|302132873|ref|ZP_07258863.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|213924171|gb|EEB57746.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|161528628|ref|YP_001582454.1| isoleucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
 gi|160339929|gb|ABX13016.1| isoleucyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
          Length = 1065

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 15/78 (19%)

Query: 256 DRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
           +        ++  G +  E G KMSKS GN +   ELLE        +PA +IR   +  
Sbjct: 577 NGPTPPYKSFLFQGHVLDEKGGKMSKSKGNVLEGIELLE-------KYPADLIRFYFM-- 627

Query: 315 HYR----EPIDFTVQRLT 328
            ++    EP+ F+ + L 
Sbjct: 628 -WKASPIEPLSFSTEELM 644


>gi|28868034|ref|NP_790653.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|81732507|sp|Q889E4|SYI_PSESM RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|28851270|gb|AAO54348.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
           DC3000]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|116182640|ref|XP_001221169.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
 gi|88186245|gb|EAQ93713.1| hypothetical protein CHGG_01948 [Chaetomium globosum CBS 148.51]
          Length = 947

 Score = 37.1 bits (85), Expect = 5.7,   Method: Composition-based stats.
 Identities = 35/152 (23%), Positives = 58/152 (38%), Gaps = 20/152 (13%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL--------LETKKFGGRSWP----- 303
            +     +  H   L+ EG+KMSKS GN I+ +++        L+ +K   R  P     
Sbjct: 590 GLSPFKTLITHGFTLDKEGKKMSKSLGNIISADQVMDGSLLPPLKPRKSDVRPAPVKDAL 649

Query: 304 -APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLNT 361
               +RL +  + Y   I      LT     L K+  T     G + P+  +A    L T
Sbjct: 650 GPDALRLWVASSDYTRDIVLGEPVLTTIHQALLKYRITIKMLTGSMHPSACTA---PLTT 706

Query: 362 VSAIQALH--KLARESTKNHDLLPIFNASAHI 391
           +  I  L    +  E  +++D      A   +
Sbjct: 707 LDQIALLQLGDVMAEVGRHYDAHEFNKAFNAL 738


>gi|299119297|gb|ADJ11451.1| GA17300 [Drosophila miranda]
 gi|299119305|gb|ADJ11455.1| GA17300 [Drosophila miranda]
 gi|299119307|gb|ADJ11456.1| GA17300 [Drosophila miranda]
 gi|299119313|gb|ADJ11459.1| GA17300 [Drosophila miranda]
 gi|299119315|gb|ADJ11460.1| GA17300 [Drosophila miranda]
 gi|299119317|gb|ADJ11461.1| GA17300 [Drosophila miranda]
 gi|299119319|gb|ADJ11462.1| GA17300 [Drosophila pseudoobscura]
 gi|299119321|gb|ADJ11463.1| GA17300 [Drosophila pseudoobscura]
 gi|299119323|gb|ADJ11464.1| GA17300 [Drosophila pseudoobscura]
 gi|299119325|gb|ADJ11465.1| GA17300 [Drosophila pseudoobscura]
 gi|299119327|gb|ADJ11466.1| GA17300 [Drosophila pseudoobscura]
 gi|299119329|gb|ADJ11467.1| GA17300 [Drosophila pseudoobscura]
 gi|299119331|gb|ADJ11468.1| GA17300 [Drosophila pseudoobscura]
 gi|299119333|gb|ADJ11469.1| GA17300 [Drosophila pseudoobscura]
 gi|299119335|gb|ADJ11470.1| GA17300 [Drosophila pseudoobscura]
 gi|299119339|gb|ADJ11472.1| GA17300 [Drosophila pseudoobscura]
 gi|299119341|gb|ADJ11473.1| GA17300 [Drosophila pseudoobscura]
 gi|299119343|gb|ADJ11474.1| GA17300 [Drosophila pseudoobscura]
 gi|299119345|gb|ADJ11475.1| GA17300 [Drosophila pseudoobscura]
 gi|299119347|gb|ADJ11476.1| GA17300 [Drosophila pseudoobscura]
          Length = 134

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 47/141 (33%), Gaps = 37/141 (26%)

Query: 239 DLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           DLI  H      N  A         K       NG L L   KMSKS+GNF+T+ + +E 
Sbjct: 2   DLINNHLTFTLYNHAAIW--PKDDTKWPKGMRVNGHLLLNSAKMSKSDGNFLTLTDAVEK 59

Query: 295 KKFGGRS-------------------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
               G                       A ++RL          I++  + L E +  L 
Sbjct: 60  FSADGMRLCLADAGDSIEDANFVVSTADAGILRLFTF-------IEWVKEML-ETKSTLR 111

Query: 336 KWPQTSTSKGIIDPAVLSALY 356
           K      ++   D   LS L 
Sbjct: 112 K----GAARTFNDQVFLSELN 128


>gi|331008751|gb|EGH88807.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|330966381|gb|EGH66641.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
           M302091]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|330878964|gb|EGH13113.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|325963645|ref|YP_004241551.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
 gi|323469732|gb|ADX73417.1| valyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
          Length = 873

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G D+I     + + ++   +      +  I    L+ + +KMSKS GN +   
Sbjct: 547 PFDVRPQGHDIIRTWLFSSVVRADALENSAPWKHAAISGWILDPDRKKMSKSKGNVVVPT 606

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMT 314
           ++LE        + +  +R      
Sbjct: 607 DVLE-------EYGSDAVRYWAASA 624


>gi|315927239|gb|EFV06585.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
           DFVF1099]
          Length = 249

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 8/61 (13%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
           +G+   EG KMSKS GN +   E+++       ++ +   R  +L    +    DF+   
Sbjct: 107 HGWWTKEGEKMSKSKGNVVKPKEVVD-------AYGSEAFRYFLLREVPFGNDGDFSENM 159

Query: 327 L 327
           L
Sbjct: 160 L 160


>gi|293400597|ref|ZP_06644742.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291305623|gb|EFE46867.1| leucine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 799

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 19/137 (13%)

Query: 258 IEKTANIWIHNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLMTH 315
            E    ++ H G  L     KMSKS GN +  ++++E+         A  +R   M M  
Sbjct: 556 KEPFQKLF-HQGMILGENNEKMSKSRGNVVNPDDIVESHG-------ADALRVYEMFMGP 607

Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
               + ++   L  +   L +  +  T +  +       L          +  H   ++ 
Sbjct: 608 LEAALPWSTTGLDGSRKWLERVWRLYTEQNKLAKENDGKLD---------KVYHATVKKV 658

Query: 376 TKNHDLLPIFNASAHIL 392
           T + + L +  A + ++
Sbjct: 659 THDVETLNLNTAISQMM 675


>gi|257487502|ref|ZP_05641543.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
           11528]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|168024570|ref|XP_001764809.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684103|gb|EDQ70508.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 906

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 12/108 (11%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D++F      I            + +++H    + +GRKMSKS GN I   + +E  
Sbjct: 488 TGHDILFFWVARMIMMGIEFTGKLPFSTVYLHGLVRDAQGRKMSKSLGNVIDPLDTIE-- 545

Query: 296 KFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQT 340
                 +    +R  +       P   ++ +++RLT  +   +K    
Sbjct: 546 -----EYGTDALRFTLATG--TTPGQDVNLSMERLTSNKAFTNKLWNA 586


>gi|158321221|ref|YP_001513728.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
 gi|158141420|gb|ABW19732.1| isoleucyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
          Length = 1032

 Score = 37.1 bits (85), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 10/86 (11%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IA S     +    N+ +++  L+ EGRKMSKS GN +   EL +        + A  +R
Sbjct: 561 IAISTFVMGVSPYKNVLVNDLILDKEGRKMSKSRGNTVDPFELFD-------KYGADALR 613

Query: 309 LAML--MTHYREPIDFTVQRLTEAEI 332
             +L     +  P  F ++ L E + 
Sbjct: 614 WYLLFVSPAW-SPTKFDIEGLKEVQS 638


>gi|321313708|ref|YP_004205995.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
 gi|320019982|gb|ADV94968.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
          Length = 664

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A QE      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEQE------NITPQEY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
             +      K   +L         R T   H   +  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAAADIQKLWKQLEISNDDF-IRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|289674847|ref|ZP_06495737.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
          Length = 770

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|158523214|ref|YP_001531084.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
 gi|158512040|gb|ABW69007.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
          Length = 640

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 44/120 (36%), Gaps = 14/120 (11%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I+ DV  R   +    K V ++    +  DKI++ A           
Sbjct: 14  VNAKPHLGHAYTTIMADVAARF--HAMAGKKVFFLTGTDEHGDKIMKAAAAR------GV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
           +        +  F    T L     +H  R T+   + +  +  ++     YEA  +I F
Sbjct: 66  SPKAYADTISALFRDLWTELDIGY-SHFIRTTDENHKQV--VSRVLA--AIYEA-GDIYF 119


>gi|120405753|ref|YP_955582.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
 gi|119958571|gb|ABM15576.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
          Length = 511

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 40/125 (32%), Gaps = 11/125 (8%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
                H+G+A   I  D + R  R    +     VR +T  D   ++ A        +  
Sbjct: 14  PNGDPHVGHAYEYIATDAVARFKRLDGFD-----VRFLTGTDVHGLKMAETAAK---LGV 65

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEI 152
             + +   N+  F +   +L   +     R +  +H      + + ++  G  Y      
Sbjct: 66  PTAELARSNSDVFQRLQEKLHI-SFDRFIRTSDPDHYEASKAIWRRMVDAGDVYLGKYSG 124

Query: 153 IFDTS 157
            +   
Sbjct: 125 WYSVR 129


>gi|55741934|ref|NP_001006711.1| ADP-ribosylation factor-like 4A [Xenopus (Silurana) tropicalis]
 gi|49522410|gb|AAH75432.1| ADP-ribosylation factor-like 4A [Xenopus (Silurana) tropicalis]
          Length = 200

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
           +R+ EA+  L K  + S ++G+  P ++ A   DL     +  + KL   +         
Sbjct: 106 ERMEEAKTELHKITKISENQGV--PVLIVANKQDLRNSLTLSEIEKLLALNEFGSSTPWH 163

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
             A+  I+G     + L + I    E +++ R +L + K
Sbjct: 164 LQATCAIIG-----DGLREGIEKLYEMIIKRRKMLRQQK 197


>gi|66043975|ref|YP_233816.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
 gi|75503516|sp|Q4ZYJ4|SYI_PSEU2 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|63254682|gb|AAY35778.1| Isoleucyl-tRNA synthetase, class Ia [Pseudomonas syringae pv.
           syringae B728a]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|322372362|ref|ZP_08046898.1| methionine--tRNA ligase [Streptococcus sp. C150]
 gi|321277404|gb|EFX54473.1| methionine--tRNA ligase [Streptococcus sp. C150]
          Length = 667

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   I  DVL R  R    +  V Y+  + +   KI ++A +   +         +
Sbjct: 19  HIGSAYTTIACDVLARYKRMMNYD--VFYLTGLDEHGQKIQQKAEEAGITPQAYVDGMAV 76

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLI-QNIILHGHAYEANNEIIFDTS 157
                   VKD  +L  ++     R T ++  +++  + + ++  G  Y       +  S
Sbjct: 77  G-------VKDLWQLLNISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSGWYSVS 129


>gi|320326230|gb|EFW82284.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           B076]
 gi|320330654|gb|EFW86631.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
 gi|330881361|gb|EGH15510.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
           race 4]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|298485392|ref|ZP_07003482.1| Isoleucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298160090|gb|EFI01121.1| Isoleucyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|330988787|gb|EGH86890.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
           M301315]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|289625177|ref|ZP_06458131.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           NCPPB3681]
 gi|289651361|ref|ZP_06482704.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           2250]
 gi|330869173|gb|EGH03882.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
           0893_23]
          Length = 943

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|170016895|ref|YP_001727814.1| isoleucyl-tRNA synthetase [Leuconostoc citreum KM20]
 gi|169803752|gb|ACA82370.1| Isoleucyl-tRNA synthetase [Leuconostoc citreum KM20]
          Length = 930

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 45/143 (31%), Gaps = 29/143 (20%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A       N+      L+ +G KMSKS GN I+   + +            ++RL  
Sbjct: 572 SVAATGHAPYKNVLSQGFTLDGKGNKMSKSLGNTISPLAVADQMGI-------EILRLWT 624

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV-SAIQ---- 366
           +     + +  +   L +      K   T           L A  +D N    AI     
Sbjct: 625 ISVDTSQDMPVSNDILKQVSESYRKIRNTLR--------FLMANTSDFNYATDAIAFEDR 676

Query: 367 ---------ALHKLARESTKNHD 380
                     L+   ++   ++D
Sbjct: 677 AGHDQYFSVVLNDFVKDVRASYD 699


>gi|85704104|ref|ZP_01035207.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
 gi|85671424|gb|EAQ26282.1| leucyl-tRNA synthetase [Roseovarius sp. 217]
          Length = 889

 Score = 37.1 bits (85), Expect = 5.9,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 40/146 (27%), Gaps = 14/146 (9%)

Query: 16  TEFQAI-DPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
             F+A  D +  + YV    P      H+G+ R   + DV+ R          V +    
Sbjct: 21  EVFRARRDETRPKYYVLEMFPYPSGRIHMGHVRNYTMGDVVARY--KIATGHNVLHPMGW 78

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
                     A                T  N          L       +  AT    + 
Sbjct: 79  DAFGMPAENAAMASGGH------PKDWTYSNIADMRAQMKPLGLSIDWSREFATCDPEYY 132

Query: 130 PQMIYLIQNIILHGHAYEANNEIIFD 155
            Q   L  + + HG  Y  N  + +D
Sbjct: 133 GQQQALFLDFLEHGLVYRKNAVVNWD 158


>gi|323359815|ref|YP_004226211.1| leucyl-tRNA synthetase [Microbacterium testaceum StLB037]
 gi|323276186|dbj|BAJ76331.1| leucyl-tRNA synthetase [Microbacterium testaceum StLB037]
          Length = 857

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 43/150 (28%), Gaps = 19/150 (12%)

Query: 15  ITEFQA--IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
              F+A   D    R YV     Y     H+G+A   +  D++ R  R+         V 
Sbjct: 30  KDPFRAGGDDDKRPRKYVLAMFPYPSGDLHMGHAENYLYSDIVARFWRHRGYN-----VL 84

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHI 129
           N    D   +     E+ +I         T  N  Q                 R      
Sbjct: 85  NPIGWDSFGLPA---ENAAIKRGADPVEWTYANIAQQKASLKDYGVSFD--WSRVLHTSD 139

Query: 130 PQMIYLI----QNIILHGHAYEANNEIIFD 155
           P+         Q +   G AY  +  + +D
Sbjct: 140 PEYYRWNQWLFQKLYEKGLAYRKDALVNWD 169


>gi|225850238|ref|YP_002730472.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
 gi|259511511|sp|C0QP76|SYI_PERMH RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|225645021|gb|ACO03207.1| isoleucine#tRNA ligase [Persephonella marina EX-H1]
          Length = 947

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 34/87 (39%), Gaps = 7/87 (8%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            +        +  H   L+ +G KMSKS GN I   ++++        + A ++RL ++ 
Sbjct: 586 ASYGRAPYDAVLTHGFILDEKGNKMSKSLGNVIPPEKIIKM-------YGADILRLWVVS 638

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT 340
             Y E I   +  L        K   T
Sbjct: 639 EDYTEDIKIGMNLLKSIADDYRKIRNT 665


>gi|71737768|ref|YP_273013.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|84029558|sp|Q48NK6|SYI_PSE14 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|71558321|gb|AAZ37532.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
           1448A]
          Length = 943

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 598 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 650

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 651 LQRSADAYRRIRNTAR 666


>gi|87311784|ref|ZP_01093898.1| probable isoleucyl-tRNA synthetase [Blastopirellula marina DSM
           3645]
 gi|87285458|gb|EAQ77378.1| probable isoleucyl-tRNA synthetase [Blastopirellula marina DSM
           3645]
          Length = 1122

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 29/128 (22%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW     A+S+   GK  D  G  +   +PH                  N  +    L  
Sbjct: 603 GWFYSQLAISTLLFGKGGD--GQTVRHEYPH---------------PFKNCIVLGLMLGE 645

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH--YREPIDFTVQRLTEA- 330
           +G+KMSKS  N+   NE+ +        + A  +R  +      +   I +  Q + ++ 
Sbjct: 646 DGQKMSKSKRNYREPNEIFD-------KYGADALRWYLFANQPPWTS-IRYNEQSIKDSI 697

Query: 331 -EILLSKW 337
            E LL  W
Sbjct: 698 PEFLLRLW 705


>gi|304407500|ref|ZP_07389152.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
 gi|304343451|gb|EFM09293.1| valyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
          Length = 886

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 45/227 (19%), Positives = 83/227 (36%), Gaps = 27/227 (11%)

Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAM 222
           +   +  E  +GT  PE    +       WK+   +   W S   W     GW  E    
Sbjct: 423 WHHAETGEIYVGTEAPEGADAEGSP----WKQDEDVLDTWFSSALWPFSTLGWPDEDHED 478

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
              +     D+   G D+I+      I  +          ++ +H    +   +KMSKS 
Sbjct: 479 FKRF--YPTDLLVTGYDIIYFWVARMIFTALEFTDQIPFKDVLMHGLVRDENNQKMSKSL 536

Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQ 339
           GN I   +++E        + A  +R  ML T+   P   + F  +++ +A    +K   
Sbjct: 537 GNGIDPLDVIE-------KYGADAMR-FMLSTN-NTPGQDLRFRWEKVEQARNFANKIWN 587

Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQA------LHKLARESTKNHD 380
            S    +++   +SA   D+              L++ +R+ T+  D
Sbjct: 588 ASR-FALMNLEGVSAADIDITVPLGTADRWILHRLNETSRDVTRMID 633


>gi|163759904|ref|ZP_02166988.1| glutamyl-Q tRNA(Asp) synthetase [Hoeflea phototrophica DFL-43]
 gi|162282862|gb|EDQ33149.1| glutamyl-Q tRNA(Asp) synthetase [Hoeflea phototrophica DFL-43]
          Length = 312

 Score = 37.1 bits (85), Expect = 6.0,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 52/173 (30%), Gaps = 37/173 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV-TYVRNITDIDDKIIERARQEHPSIP 91
           P+     H+G+AR  +        L + + ++    ++  I DID     RAR E     
Sbjct: 21  PSPNGLLHLGHARSAL--------LNWRFAKRSGARFLLRIEDIDT---TRARPE----- 64

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA--- 148
                        Q   +D + L    P    R ++H       +  +   G  Y A   
Sbjct: 65  -----------FEQAIFEDLSWLGLDWPEPVRRQSDHFDDYRAALVELRKLGLLYPAFMS 113

Query: 149 NNEIIFDTSSIPNYGSFSRRKID------EQKMGTRVPEKYHKKNPADFILWK 195
             E+          G    R  D          G    E+  + +  D   W+
Sbjct: 114 RAEVTSHVRVYEQNGRVWPRDPDGAPHYPAVDQGLAEAERNRRIDAGDPHSWR 166


>gi|291482409|dbj|BAI83484.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
          Length = 664

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A QE      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEQE------NITPQEY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
             +      K   +L         R T   H   +  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAAADIQKLWKQLEISNDDF-IRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|157363246|ref|YP_001470013.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
 gi|166980059|sp|A8F465|SYI_THELT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|157313850|gb|ABV32949.1| isoleucyl-tRNA synthetase [Thermotoga lettingae TMO]
          Length = 911

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 35/86 (40%), Gaps = 8/86 (9%)

Query: 256 DRIEKTANIWIHNGFLN-LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
              +      + +GF+   EG+KMSKS GN +   E+          + A V+RL +  +
Sbjct: 571 THDKPPYKTVLTHGFIKDAEGKKMSKSLGNVVDPLEVCS-------KYGADVLRLWLASS 623

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
            Y   I  +   + +   +  K   T
Sbjct: 624 DYFNDIRISKNIIFQQVEVYKKIRNT 649


>gi|322412238|gb|EFY03146.1| isoleucyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
           dysgalactiae ATCC 27957]
          Length = 933

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGYAPYKAILSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGADILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  +++ L +      K   T           L A  +D N
Sbjct: 623 ASVDTDNDVRVSMEILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|299119287|gb|ADJ11446.1| GA17300 [Drosophila affinis]
          Length = 134

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 13/77 (16%)

Query: 239 DLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           DLI  H      N +A         K       NG L L   KMSKS+GNF+T+++ +E 
Sbjct: 2   DLINNHLTFTLYNHVAIW--PKDDTKWPKGMRVNGHLLLNSAKMSKSDGNFLTLSDAVE- 58

Query: 295 KKFGGRSWPAPVIRLAM 311
                  + A  +RL +
Sbjct: 59  ------KFSADGMRLCL 69


>gi|284166577|ref|YP_003404856.1| valyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
 gi|284016232|gb|ADB62183.1| valyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
          Length = 928

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 12/117 (10%)

Query: 21  IDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
            DP+ +  +    PTV    H+G+     + D   R  R   G+    +  +   I  + 
Sbjct: 52  RDPNTVYAIDTPPPTVSGSLHMGHLYGSTLQDFAARYQRMADGDVLFPFGYDDNGIASER 111

Query: 80  IERAR-----QEHPSIPINDAISIITSKNTQQFVKDTTRL------ACLAPTHQPRA 125
           +  +      Q++      +    +  +   +F +    L           T +PR 
Sbjct: 112 LTESELDIRHQDYERREFQELCREVCQEYEAEFTEKMQDLGTSIDWNNTYKTIEPRV 168



 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 41/118 (34%), Gaps = 7/118 (5%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G D+I     + I +              I+   L+    KMSKS GN +  +
Sbjct: 514 PFDLRPQGHDIISFWLFHTIVKCYEHTGEVPFDATMINGHVLDENREKMSKSRGNVVEPD 573

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
           E+L         +P   +R         +   +  + LT  E LL K    S     +
Sbjct: 574 EVLAD-------FPVDAVRFWAASAAVGDDFPYQEKDLTAGEKLLRKLWNASKLVDTL 624


>gi|184154662|ref|YP_001843002.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
 gi|183226006|dbj|BAG26522.1| methionyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
          Length = 666

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 9/83 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H                     I +G+L ++  KMSKS GN +    L
Sbjct: 266 DVHMVGKEIVRFHTIYWPIILHAL--GLPLPKHVIGHGWLTMKDGKMSKSKGNVVYPETL 323

Query: 292 LETKKFGGRSWPAPVIRLAMLMT 314
           ++        +     R  +L  
Sbjct: 324 IDR-------YGLDATRYYLLRA 339


>gi|170740460|ref|YP_001769115.1| isoleucyl-tRNA synthetase [Methylobacterium sp. 4-46]
 gi|168194734|gb|ACA16681.1| isoleucyl-tRNA synthetase [Methylobacterium sp. 4-46]
          Length = 989

 Score = 37.1 bits (85), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+ +G KMSKS GN +   +++           A ++RL +
Sbjct: 631 SCGTRGRAPYDVVLTHGFVLDPKGEKMSKSRGNVVAPQDVIAASG-------ADILRLWV 683

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
             + Y + +      +        K   +
Sbjct: 684 AASDYTDDLRIGPPIIKTFSETYRKLRNS 712


>gi|332971056|gb|EGK10026.1| methionine--tRNA ligase [Desmospora sp. 8437]
          Length = 668

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 49/157 (31%), Gaps = 20/157 (12%)

Query: 25  NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
               Y+  P  Y  D  HIG+A   +  D + R  R    +  V Y+    +   KI  R
Sbjct: 11  KPSFYITTPIYYPNDKLHIGHAYTTVAGDAMARYKRLRGYD--VLYLTGTDEHGQKIERR 68

Query: 83  ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNII 140
           A+++        A         +   K    L         R T   H      L Q ++
Sbjct: 69  AKEQ------GMAPQEFVDGIVKGIRKLWDELEISYDDF-IRTTQDRHKKVAQQLFQRLL 121

Query: 141 LHGHAY--EANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
             G  Y  E          S      ++ R+++E   
Sbjct: 122 DQGDIYLDEYEGWYCTPCESF-----WTERQLEEGNC 153


>gi|299782799|gb|ADJ40797.1| Methionyl-tRNA synthase [Lactobacillus fermentum CECT 5716]
          Length = 666

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 9/83 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H                     I +G+L ++  KMSKS GN +    L
Sbjct: 266 DVHMVGKEIVRFHTIYWPIILHAL--GLPLPKHVIGHGWLTMKDGKMSKSKGNVVYPETL 323

Query: 292 LETKKFGGRSWPAPVIRLAMLMT 314
           ++        +     R  +L  
Sbjct: 324 IDR-------YGLDATRYYLLRA 339


>gi|291523138|emb|CBK81431.1| isoleucyl-tRNA synthetase [Coprococcus catus GD/7]
          Length = 1049

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 9/66 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
           +A S          N+ I  G +    G+KMSKS GN +   E L       R + A  I
Sbjct: 571 MAISTLLFNQSPFRNV-IVLGHVQDENGQKMSKSKGNAVDPMEAL-------REYGADAI 622

Query: 308 RLAMLM 313
           R     
Sbjct: 623 RWYFYS 628


>gi|227514298|ref|ZP_03944347.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
 gi|227087346|gb|EEI22658.1| methionine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
          Length = 666

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 30/83 (36%), Gaps = 9/83 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G ++I  H                     I +G+L ++  KMSKS GN +    L
Sbjct: 266 DVHMVGKEIIRFHTIYWPIMLHAL--GLPLPKHVIGHGWLTMKDGKMSKSKGNVVYPETL 323

Query: 292 LETKKFGGRSWPAPVIRLAMLMT 314
           ++        +     R  +L  
Sbjct: 324 IDR-------YGLDATRYYLLRA 339


>gi|223984583|ref|ZP_03634710.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
 gi|223963430|gb|EEF67815.1| hypothetical protein HOLDEFILI_02006 [Holdemania filiformis DSM
           12042]
          Length = 889

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF        Q+    +     ++ IH    + +GRKMSKS GN +   ++
Sbjct: 495 DVLVTGYDIIFFWVARMAFQARYFTKSRPFKDVLIHGLIRDAQGRKMSKSLGNGVDPMDV 554

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +              +R  +       P   + +  ++L  +   ++K    S 
Sbjct: 555 IAKHGV-------DSLRFFLTTNS--TPGQDMRYIEEKLEASWNFINKIWNASR 599


>gi|187777309|ref|ZP_02993782.1| hypothetical protein CLOSPO_00861 [Clostridium sporogenes ATCC
           15579]
 gi|187774237|gb|EDU38039.1| hypothetical protein CLOSPO_00861 [Clostridium sporogenes ATCC
           15579]
          Length = 1038

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 11/112 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGVKMSKSKGNVVEPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  +  P  F+ + + E +         ST   +    VL A  ++ N
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQRKF-----LSTLWNVYSFYVLYADLDNFN 662


>gi|83859756|ref|ZP_00953276.1| glutamyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
 gi|83852115|gb|EAP89969.1| glutamyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
          Length = 290

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 34/116 (29%), Gaps = 28/116 (24%)

Query: 33  PTVYDFAHIGNARPMIV-FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
           P+   + H+G+A   +  FD           E     +  I DID    +          
Sbjct: 10  PSPTGYLHLGHAFSALTAFDAAR--------EADGACLLRIEDIDTNRCK---------- 51

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                           ++D   L C  P    R + H P+    ++ +   G  Y 
Sbjct: 52  ---------PDFEAAALEDLDWLGCNWPEPVRRQSEHFPEYHAALETLAARGLVYR 98


>gi|296329539|ref|ZP_06872025.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305672736|ref|YP_003864407.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153282|gb|EFG94145.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305410979|gb|ADM36097.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 664

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A QE      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEQE------NITPQEY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
             +      K   +L         R T   H   +  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAAADIQKLWKQLEISNDDF-IRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|302879580|ref|YP_003848144.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
 gi|302582369|gb|ADL56380.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
          Length = 695

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 8/79 (10%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+    I  D+  R  +    E  V YV         I+ RA  E            
Sbjct: 19  IHLGHLVEYIQTDIWVRFQKMQGHE--VHYVCADDTHGTPIMLRAESE------GITPEA 70

Query: 99  ITSKNTQQFVKDTTRLACL 117
           + ++  Q+   D       
Sbjct: 71  LIARVWQEHYDDFAAFHVE 89



 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 13/95 (13%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        ++ H GFL + G KMSKS G FIT    ++
Sbjct: 300 HFIGKDILYFHALFWPAMLEHA-GFRTPTKLFAH-GFLTVNGEKMSKSRGTFITAKSYVD 357

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
             K          +R       Y   I+ +++ L 
Sbjct: 358 NIKNT------EYLRYY-----YAAKINGSMEDLD 381


>gi|239637476|ref|ZP_04678450.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596921|gb|EEQ79444.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 656

 Score = 37.1 bits (85), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTELEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
             +          +L         R T   H  Q++  + + ++  G  Y    E  +  
Sbjct: 72  LDEMIAGIKSLWDKLEISNDDF-IRTTEERH-KQVVEKVFERLLKQGDIYLGEYEGWYSV 129

Query: 157 SSIPNY 162
                Y
Sbjct: 130 PDETYY 135


>gi|260663709|ref|ZP_05864597.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
 gi|260551760|gb|EEX24876.1| methionyl-tRNA synthase [Lactobacillus fermentum 28-3-CHN]
          Length = 666

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 30/83 (36%), Gaps = 9/83 (10%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G +++  H                     I +G+L ++  KMSKS GN +    L
Sbjct: 266 DVHMVGKEIVRFHTIYWPIILHAL--GLPLPKHVIGHGWLTMKDGKMSKSKGNVVYPETL 323

Query: 292 LETKKFGGRSWPAPVIRLAMLMT 314
           ++        +     R  +L  
Sbjct: 324 IDR-------YGLDATRYYLLRA 339


>gi|16077106|ref|NP_387919.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307847|ref|ZP_03589694.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221312169|ref|ZP_03593974.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           NCIB 3610]
 gi|221317102|ref|ZP_03598396.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221321365|ref|ZP_03602659.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           SMY]
 gi|586060|sp|P37465|SYM_BACSU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|467427|dbj|BAA05273.1| methionyl-tRNA synthetase [Bacillus subtilis]
 gi|2632305|emb|CAB11814.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
           168]
          Length = 664

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  D + R  R    +  V Y+    +   KI ++A QE      N      
Sbjct: 22  HIGHAYTTVAGDAMARYKRLKGFD--VRYLTGTDEHGQKIQQKAEQE------NITPQEY 73

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
             +      K   +L         R T   H   +  + Q ++ +G  Y    E  +   
Sbjct: 74  VDRAAADIQKLWKQLEISNDDF-IRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYSIP 132

Query: 158 SIPNY 162
               Y
Sbjct: 133 DETFY 137


>gi|330836491|ref|YP_004411132.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
 gi|329748394|gb|AEC01750.1| Isoleucyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
          Length = 1044

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 62/153 (40%), Gaps = 21/153 (13%)

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
            +          N  ++   L  +G+KMSKS  N+    E++       + + A  +R +
Sbjct: 570 IAAALFEKPAFLNCIVNGIILAADGKKMSKSEHNYTDPMEIV-------KQYGADALRFS 622

Query: 311 MLMTH--YREPIDFTVQRLTEAEILL-------SKWPQTSTSKGIIDPAVLSALYNDLNT 361
           ++ ++  + + + F+   + E   +L         +  T  +     P+  +  Y DL  
Sbjct: 623 LMNSNVTHADDLKFSEDSVKEVIKMLLLPLWNAYSFFITYANIDGYKPSATA--YEDLEN 680

Query: 362 V--SAI-QALHKLARESTKNHDLLPIFNASAHI 391
                I  +L KL ++ST  ++   +  A++ +
Sbjct: 681 PLDRWIESSLQKLVKDSTDAYEAYDVQKAASAL 713


>gi|310659180|ref|YP_003936901.1| isoleucyl-tRNA synthetase 2 [Clostridium sticklandii DSM 519]
 gi|308825958|emb|CBH21996.1| Isoleucyl-tRNA synthetase 2 (Isoleucine--tRNA ligase 2) (IleRS 2)
           [Clostridium sticklandii]
          Length = 1034

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           IA S          N+ +++  L+ +G+KMSKS GN +   E+ +        + A V+R
Sbjct: 563 IAISTFVMGKSPYKNVLVNDLILDKDGKKMSKSRGNTVDPFEMFD-------KYGADVLR 615

Query: 309 LAML 312
             +L
Sbjct: 616 WYLL 619


>gi|226356378|ref|YP_002786118.1| leucyl-tRNA synthetase [Deinococcus deserti VCD115]
 gi|226318368|gb|ACO46364.1| putative Leucine--tRNA ligase (Leucyl-tRNA synthetase) [Deinococcus
           deserti VCD115]
          Length = 831

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 70/202 (34%), Gaps = 43/202 (21%)

Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC------ADRIEKTANIWIHNGFLNLEGR 276
           +  +L    D++ GG++    H       +          + E  A +      L  +  
Sbjct: 536 AHAHL-LPVDLYTGGIEHAILHLLYSRFWTKVMRDMGLTTQSEPFARLRNQGMILGEDNE 594

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAEI 332
           KMSKS GN +  ++L+       R + A  +R  ++      P +    +  Q +     
Sbjct: 595 KMSKSRGNVVDPDDLV-------REYGADTVRTFLMFI---APWELGGPWDSQGINGPAK 644

Query: 333 LLSKW-----------PQTSTSKGIIDPAVLSAL---YND-----LNTVSAIQALHKLAR 373
            LS+            P+ + ++  +  AV SAL     D      NT+  I  L +L  
Sbjct: 645 WLSRVWNLYFEDKTTGPEENITEADLRHAVHSALAKVNGDFERMSFNTI--IATLMELTN 702

Query: 374 ESTKN-HDLLPIFNASAHILGI 394
              K     +    A    LGI
Sbjct: 703 ILVKAKRSPVASTAAWDEALGI 724


>gi|218514117|ref|ZP_03510957.1| leucyl-tRNA synthetase [Rhizobium etli 8C-3]
          Length = 318

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 11/126 (8%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      H+G+ R   + DV+ R  R       V +              A +       
Sbjct: 43  PYPSGRIHMGHVRNYAMGDVVARYKRARGYN--VLHPMGWDAFGMPAENAAMERGVH--- 97

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEAN 149
               +  T +N          +       +  AT    +     +L  + +  G  Y   
Sbjct: 98  ---PASWTYQNIASMKAQLKAMGLSLDWSREFATCDVEYYQHQQHLFLDFLEKGLVYRKQ 154

Query: 150 NEIIFD 155
           +++ +D
Sbjct: 155 SKVNWD 160


>gi|70732169|ref|YP_261925.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
 gi|123762009|sp|Q4K758|SYM_PSEF5 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|68346468|gb|AAY94074.1| methionyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
          Length = 681

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 12/132 (9%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR--EPIDFTVQ 325
           +G+L + G+KMSKS G FI     LE             +R        R  + +D  ++
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLE-------HLSPEYLRYYYASKLGRGVDDLDLNLE 374

Query: 326 RLTEAEI--LLSKWPQ-TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
              +     L+ K     S   G I       + +        +A    A      ++  
Sbjct: 375 DFVQKVNSDLVGKVVNIASRCAGFIHKGNAGVMVDSNAAPELTEAFLAAAPSIADAYEAR 434

Query: 383 PIFNASAHILGI 394
               A   I+G+
Sbjct: 435 DFARAMREIMGL 446


>gi|7476032|pir||T09994 arginine-tRNA ligase (EC 6.1.1.19) - Mycobacterium leprae
 gi|699338|gb|AAA63099.1| argS [Mycobacterium leprae]
          Length = 687

 Score = 37.1 bits (85), Expect = 6.3,   Method: Composition-based stats.
 Identities = 82/408 (20%), Positives = 136/408 (33%), Gaps = 77/408 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLL--------RYYYGEKCVTYVRNITDIDDKIIERAR 84
           PT     HIG  R   V D L RLL        R YY       V   T+    +I  A+
Sbjct: 269 PT--GPIHIGGTRWAAVGDALGRLLSTQGAAVVREYYFNDHGAQVDRFTN---SLIAAAK 323

Query: 85  QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHG 143
            E        A + +T    Q   +    L+              +  M   I+  +   
Sbjct: 324 GELTPAD-GYAGTYVTDIAAQVMQQAPYALSLPESEMHETVREIGVDLMFTHIKKSL--- 379

Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
           H +  + ++     S+   G     ++DE     R     ++K   D  LW R++     
Sbjct: 380 HEFGTDFDVYTHEDSMHASG-----RVDEAIARLRDTGNVYEK---DGALWLRTSAFGDD 431

Query: 204 WESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQ---SCCAD 256
            +       G+P +     A       + FD  I+  G D    HH   IA+   +  A 
Sbjct: 432 KDRVVIKSDGKPAYIAGDLAYYLDKRQRGFDLCIYMLGAD----HHGY-IARLKAAAAAF 486

Query: 257 RIEKTANIWIHNGFLNLEGR----KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
             +      +    +NL       +MSK +GN IT+++L+E              R +++
Sbjct: 487 GDDPAIVEVLIGQMVNLVCDGQLVRMSKRSGNVITLDDLVEAIGV-------DAARYSLI 539

Query: 313 MTHYREPIDF--------TVQR----LTEAEILLSKWPQTSTSKGII-DPAVLSALYND- 358
            +    PID         + +     +  A   LS   + +   G+I D   L  L +D 
Sbjct: 540 RSSVDTPIDIDLALWSSSSNENPVYYVQYAHARLSALARNAAEFGLIPDTGHLELLSHDK 599

Query: 359 --------------LNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
                         L T +A++  H++ R           F  S  +L
Sbjct: 600 EGALLRTVGEFPQVLKTAAALREPHRVCRYLEDLAGDYHRFYDSCRVL 647


>gi|330941226|gb|EGH44092.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
           1704B]
          Length = 672

 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 327 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 379

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 380 LQRSADAYRRIRNTAR 395


>gi|301793771|emb|CBW36159.1| valyl-tRNA synthetase [Streptococcus pneumoniae INV104]
 gi|332204591|gb|EGJ18656.1| valyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
          Length = 883

 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + EGRKMSKS GN I   ++++        +    +R
Sbjct: 492 IFQGIEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVID-------KYGTDSLR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|326318117|ref|YP_004235789.1| isoleucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374953|gb|ADX47222.1| isoleucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 959

 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 56/162 (34%), Gaps = 17/162 (10%)

Query: 195 KRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           K +  +E  ++S   +     G H E      H  G   D++  G D       + +  +
Sbjct: 562 KSTDILEVWFDSGSTFFHVLRGTHPE----VHHDSGPEADLYLEGHDQHRGWFHSSLLLA 617

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                      +  H   ++ +GRKMSKS GN I   E+        +   A +IRL + 
Sbjct: 618 SALYGRAPYKGLLTHGFTVDSQGRKMSKSLGNGIDPQEI-------NKKLGAEIIRLWVA 670

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA 350
            + Y   I    + L        +   T      +    DPA
Sbjct: 671 ASDYSGDIAGDDKILARVVDAYRRIRNTLRFLLANVSDFDPA 712


>gi|210608924|ref|ZP_03288061.1| hypothetical protein CLONEX_00240 [Clostridium nexile DSM 1787]
 gi|210152841|gb|EEA83847.1| hypothetical protein CLONEX_00240 [Clostridium nexile DSM 1787]
          Length = 555

 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 26/117 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+ ++   + Y L + Y G   + +       DD    + + E      
Sbjct: 33  PEPNGYLHIGHAKSIL---LNYGLAQKYNGTFHMRF-------DDTNPTKEKVEFVESIK 82

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
            D   +        F                 A+++  QM      +I  G AY  +
Sbjct: 83  EDIKWLGADWKDNLFF----------------ASDYFDQMYECAVKLIKKGKAYVCD 123


>gi|111225301|ref|YP_716095.1| arginyl-tRNA synthetase [Frankia alni ACN14a]
 gi|123142636|sp|Q0RD93|SYR_FRAAA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|111152833|emb|CAJ64578.1| Arginyl-tRNA synthetase (Arginine--tRNA ligase) [Frankia alni
           ACN14a]
          Length = 552

 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 55/293 (18%), Positives = 96/293 (32%), Gaps = 45/293 (15%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT      + +AR   V D L R+L          Y  N     D  ++  R     +  
Sbjct: 131 PT--GPVTLASARWAAVGDALARILTAAGFSVGGEYYVN-----DAGVQIERFGASVLAA 183

Query: 93  NDAISIITSKNTQQFVKDTTR--------LACLAPTHQPRAT--NHIPQMIYLIQNIILH 142
                I        +V +           L  L        T    +  M+  I++ +  
Sbjct: 184 AAGREIPAEGYHGAYVAEIAAAVLAGRPDLLDLPEDAALAVTTEEGLALMLTEIRSTLE- 242

Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
           G     + +      ++   G+ + + ID+ +    V +           +W R+T    
Sbjct: 243 GFG--VHFDRWASERALHTAGALT-KAIDDLRAQGHVYDADG-------AVWLRTTDFGD 292

Query: 203 GWESPW--GRGRPGWHIECSAMSSHYLGKVFD--IHGGGLDLIFPHHEN---EIAQSCCA 255
             + P     G+P +    +A      G+ FD  I+  G D    HH       A S C 
Sbjct: 293 DKDRPLVKSDGQPTYFCADAAYYRDKRGRGFDQLIYLLGAD----HHGYVARLKAISAC- 347

Query: 256 DRIEKTANIWIHNGFLNLEGR-----KMSKSNGNFITINELLETKKFGGRSWP 303
              +   N+ +  G L    R     KMSK  G F+T+++L++        + 
Sbjct: 348 FGDDPATNLDVIIGQLVTLSRGGAPVKMSKRAGTFLTLHDLVDAVGVDAARYS 400


>gi|326803764|ref|YP_004321582.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651632|gb|AEA01815.1| isoleucine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
          Length = 927

 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 43/100 (43%), Gaps = 12/100 (12%)

Query: 269 GFLNL-EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           GF+N  EGRKMSKS GN ++ N++ + +        A ++RL +     R  +  +   L
Sbjct: 585 GFVNDGEGRKMSKSLGNTVSPNDVCDQRG-------ADILRLWVASVDSRYDVRISDDIL 637

Query: 328 TEAEILLSKWPQTST----SKGIIDPAVLSALYNDLNTVS 363
            +      K   T      +    D       Y+DL+++ 
Sbjct: 638 GQVAESYRKIRNTLRFTLGNLFDFDAKENYVAYDDLDSID 677


>gi|319409376|emb|CBI83020.1| Leucyl-tRNA synthetase [Bartonella schoenbuchensis R1]
          Length = 874

 Score = 37.1 bits (85), Expect = 6.4,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 47/161 (29%), Gaps = 50/161 (31%)

Query: 270 FLNLEG-RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTV 324
            + +    KMSKS  N I  ++++        S+ A  +R  ML      P +    +T 
Sbjct: 624 HVTIGSIEKMSKSKKNIIDPDDIIA-------SYGADTVRWFMLS---DSPPERDVIWTE 673

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVL-------SAL-------------YND-----L 359
             +  A   + +  +       +   V         AL              +D      
Sbjct: 674 AGIEGAHRFVQRIWRCVALSASVLKEVEPRTGRHGEALELSKVAHRTLCAVEDDLEKLAF 733

Query: 360 NTVSAIQALHKLA--------RESTKNHDLLPIFNASAHIL 392
           N   A+  L++L         +    + ++      +    
Sbjct: 734 N--RAVARLYELLNTMTPFLNKVENIDDEMKSALRQAMDFF 772


>gi|317491042|ref|ZP_07949478.1| MazG family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920589|gb|EFV41912.1| MazG family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 276

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/99 (18%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
           R P  F  +    AE  L++W Q   ++   +  + S++ +     +A+ AL K  +   
Sbjct: 109 RHPHVFATEHHESAEASLARWEQ-RKAEERAEKDLSSSMDD---IPNALPALMKAYKIQK 164

Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
           +   +   ++    +L  +   E +++ +  A + +V E
Sbjct: 165 RCAAVGFDWDTLGPVL--DKVYEEIDEVMDEAQQAVVDE 201


>gi|291453113|ref|ZP_06592503.1| tRNA synthetase [Streptomyces albus J1074]
 gi|291356062|gb|EFE82964.1| tRNA synthetase [Streptomyces albus J1074]
          Length = 640

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 11/121 (9%)

Query: 28  MYVCGPTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           ++   PT     H+G+ A P +  D+L R LR    E    YV    D    +   AR  
Sbjct: 121 VFCPPPTPNGGLHLGHLAGPYVRADMLARALRSMGRE--ARYVTGTDDHQSYVAAAARLR 178

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGH 144
                     + + +      V                A  T H  ++  L++ +     
Sbjct: 179 ------GTTPAEVATAEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPA 232

Query: 145 A 145
           A
Sbjct: 233 A 233


>gi|242371680|ref|ZP_04817254.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
 gi|242350629|gb|EES42230.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
          Length = 656

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTELEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
             +          +L         R T   H  Q++  + + ++  G  Y    E  +  
Sbjct: 72  LDEMIAGIKSLWDKLEISNDDF-IRTTEERH-KQVVEKVFERLLKQGDIYLGEYEGWYSV 129

Query: 157 SSIPNY 162
                Y
Sbjct: 130 PDETYY 135


>gi|255575064|ref|XP_002528437.1| methionine-tRNA synthetase, putative [Ricinus communis]
 gi|223532113|gb|EEF33920.1| methionine-tRNA synthetase, putative [Ricinus communis]
          Length = 523

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 27/171 (15%), Positives = 49/171 (28%), Gaps = 16/171 (9%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G+A   I  D + R  R     K V +V   TD         +    +     
Sbjct: 90  VNAPPHMGSAYTTIAADAIARFQRLLG--KKVIFVTG-TD-----EHGEKIAAAAAACGS 141

Query: 95  AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN--N 150
           + S      +Q +      L         R T+  H   +      ++ +G  Y A+   
Sbjct: 142 SPSEHCDVISQDYRTLWKDLEISY-DKFIRTTDPKHEAIVKEFYSRVLANGDIYRADYEG 200

Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
               +     +             +   +     K++   F L K    +E
Sbjct: 201 LYCVNCEEYKDAKELLDNNCCPMHLKPCIE---RKEDNYFFALSKYQKLLE 248


>gi|159462668|ref|XP_001689564.1| predicted protein [Chlamydomonas reinhardtii]
 gi|158283552|gb|EDP09302.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 388

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 35/115 (30%), Gaps = 8/115 (6%)

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
           +   L E  +      Q +T+          A+ +DL    A+  +     E     + L
Sbjct: 35  SQVALHEYRMAYDNLLQVATADRDDWSKQKIAMEDDL---RALA-IRNSEAERLFKAERL 90

Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
            +    A +         L       + +L      L +  K+  AD  R +  +
Sbjct: 91  ALLEQVAGL----QADAALKDAAVARVAELEGAIAALRERAKYLVADLQRDKDAA 141


>gi|159045972|ref|YP_001534766.1| sensor histidine kinase RegB [Dinoroseobacter shibae DFL 12]
 gi|157913732|gb|ABV95165.1| sensor histidine kinase RegB [Dinoroseobacter shibae DFL 12]
          Length = 463

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 13/74 (17%)

Query: 371 LARESTKNHDLLPIFNASAHILG-----IEVCKEHLNKNISIAIEKLVQERLILLKMKKF 425
           LARE  K  DL  +  A+AH LG     I++  + L + +   I      R     ++  
Sbjct: 203 LAREQ-KLTDLGGVVAAAAHELGTPLATIKLVSQELAEELEDPI-----LREDAELIRD- 255

Query: 426 SSADYIRKQLESKG 439
             AD  R  L S G
Sbjct: 256 -QADRCRDILRSMG 268


>gi|157868928|ref|XP_001683016.1| methionyl-tRNA synthetase [Leishmania major strain Friedlin]
 gi|68223899|emb|CAJ04288.1| putative methionyl-tRNA synthetase [Leishmania major strain
           Friedlin]
          Length = 747

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 22/154 (14%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    HIG+    ++ DVL R  R    E    +V   TD   + +  A  +    P+ D
Sbjct: 220 VNASPHIGHVYSTLIVDVLGRYHRVKGEE---VFVMTGTDEHGQKVAEAAAKQGVSPM-D 275

Query: 95  AISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
             + ++S+  Q F +   D          +  R TN  P    L+Q+I     A     +
Sbjct: 276 FTTSVSSEFKQCFQEMNYDM--------NYFIRTTN--PTHEKLVQDIWKKLAA---KGD 322

Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
           I         + S S       +      ++  K
Sbjct: 323 IYL--GKYEGWYSVSDESFLTAQNVADGVDRDGK 354


>gi|320528328|ref|ZP_08029490.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
 gi|320131242|gb|EFW23810.1| valyl-tRNA synthetase [Solobacterium moorei F0204]
          Length = 870

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 17/164 (10%)

Query: 184 HKKNPADFILWKRSTPMEPGWESP--WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
            + +P D   W +   +   W S   W     GW  E   ++ +Y          G D+I
Sbjct: 429 GETDPEDTTNWVQDEDVLDTWFSSALWPFATLGWPEETEDLARYYPTNTM---VTGYDII 485

Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
           F        Q+    +     ++ IH    + +GRKMSKS GN I   +++E        
Sbjct: 486 FFWVARMAFQARHFTKNRPFKDVLIHGLLRDAQGRKMSKSLGNGIDPMKVIE-------E 538

Query: 302 WPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTST 342
           +    +R  +       P   + +  +++  A   ++K    S 
Sbjct: 539 YGIDALRFFLTTNS--TPGQDMRYIPEKVEAAGNFINKIWNASR 580


>gi|313115499|ref|ZP_07800964.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622209|gb|EFQ05699.1| valyl-tRNA synthetase [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 922

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 15/145 (10%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML- 312
                   + + IH    + +GRKMSKS GN I   E++         + A  +R  ++ 
Sbjct: 547 AYTGKAPFSTVCIHGIVRDSQGRKMSKSLGNGIDPLEVIA-------QYGADALRFMLVD 599

Query: 313 -MTHYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSAL--YNDLNTVS--AIQ 366
             T     + +  +++  A    +K W  T      +       L   + L+      + 
Sbjct: 600 GSTP-GNDMRYIEKKVEAARNFANKLWNATRFVLMNLPEDFTPGLPSEDKLDMSDKWVLT 658

Query: 367 ALHKLARESTKNHDLLPIFNASAHI 391
            L+++A   T N D   +  A+A I
Sbjct: 659 KLNQVAGAMTDNLDHYEMGLAAAKI 683


>gi|168485679|ref|ZP_02710187.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
 gi|183571212|gb|EDT91740.1| valyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
          Length = 883

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + EGRKMSKS GN I   ++++        +    +R
Sbjct: 492 IFQGIEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVID-------KYGTDSLR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|146304878|ref|YP_001192194.1| glutamyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
 gi|172046958|sp|A4YIL8|SYE_METS5 RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|145703128|gb|ABP96270.1| glutamyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
          Length = 566

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 37/116 (31%), Gaps = 27/116 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE-KCVTYVRNITDIDDKIIERARQEHPSIP 91
           P      H+GNAR  +        L + Y +     ++    D D K+ +  ++ +  I 
Sbjct: 104 PNPDGPLHLGNARAAV--------LSFEYAKMYKGKFILRFDDTDPKVKKPIKEAYDWI- 154

Query: 92  INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
                             D   L       + +A+  +     + + ++  G AY 
Sbjct: 155 ----------------RDDLRWLNITW-DLEFKASERMSAYYNVAKVMLEKGFAYV 193


>gi|23464992|ref|NP_695595.1| valyl-tRNA synthetase [Bifidobacterium longum NCC2705]
 gi|23325592|gb|AAN24231.1| valyl-tRNA synthetase [Bifidobacterium longum NCC2705]
          Length = 946

 Score = 37.1 bits (85), Expect = 6.5,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
           PTV    H+G+       DV+ R  R    +
Sbjct: 92  PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD 122


>gi|330684035|gb|EGG95792.1| valine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 656

 Score = 37.1 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 259 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 316

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +       + + ++ +++      ++K    + 
Sbjct: 317 -----EYGADSLRYFLATGSAPGQDLRYSTEKVESVWNFINKIWNAAR 359


>gi|163781826|ref|ZP_02176826.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159883046|gb|EDP76550.1| isoleucyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 940

 Score = 37.1 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 7/65 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  +       ++  H   ++ +GRKMSKS GN +   E++E        + A ++RL +
Sbjct: 586 SVGSYGSAPYRSVLTHGFTVDEKGRKMSKSLGNVVAPQEIIE-------KYGADILRLWV 638

Query: 312 LMTHY 316
           +   Y
Sbjct: 639 VSEDY 643


>gi|16124954|ref|NP_419518.1| isoleucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|221233674|ref|YP_002516110.1| isoleucyl-tRNA synthetase [Caulobacter crescentus NA1000]
 gi|81535936|sp|Q9AAA5|SYI_CAUCR RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|13421924|gb|AAK22686.1| isoleucyl-tRNA synthetase [Caulobacter crescentus CB15]
 gi|220962846|gb|ACL94202.1| isoleucyl-tRNA synthetase [Caulobacter crescentus NA1000]
          Length = 969

 Score = 37.1 bits (85), Expect = 6.6,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 70/199 (35%), Gaps = 31/199 (15%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H   ++  G KMSKS GN I    + +          A ++RL   
Sbjct: 618 CGTRGRAPYKAVVTHGFTMDENGEKMSKSRGNTIEPQTITKESG-------AEILRLWTA 670

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYNDLNTVSAIQ- 366
           M  Y+E        L        K   T         G  +   ++    D +   A++ 
Sbjct: 671 MVDYQEDQRIGKTILATTTDAYRKLRNTMRYLLGALAGFDEEERVT----DYDQFPALEK 726

Query: 367 -ALHKL------ARESTKNHDLLPIFNASAHILGIEVCKEHLNKN-ISIAIEKLVQERLI 418
             LH+L       RE+ +++    +         IE C+  L+     +  + L  +R  
Sbjct: 727 YILHRLWELDGQVREAYQSYRFSDVIRPL-----IEFCQGDLSALYFDVRRDSLYCDRPD 781

Query: 419 LLKMKKFSSA-DYIRKQLE 436
            LK + + +A DY+  +L 
Sbjct: 782 ALKRRAYRTALDYVFDRLT 800


>gi|317014539|gb|ADU81975.1| valyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
          Length = 872

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 40/137 (29%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R  +
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 312 L------------MTHYREPIDFTV-------------------QRLTEAEILLSKWPQT 340
                         TH     +F                     +RL E +  L ++   
Sbjct: 559 ANLCATGRDIKLSTTHLENNKNFANKLFNATSYLKLKQESFKDKERLNEYQTALGRY--A 616

Query: 341 STSKGIIDPAVLSALYN 357
            +   ++   V +AL N
Sbjct: 617 KSRLNLVTKEVRNALDN 633


>gi|295657888|ref|XP_002789508.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
 gi|226283263|gb|EEH38829.1| isoleucyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
          Length = 1024

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 41/115 (35%), Gaps = 23/115 (20%)

Query: 249 IAQSCCADRIEKTANIWI-----HNGFLNLEGRKMSKSNGNFITINEL--------LETK 295
           IAQ+    +              H   L+   RKMSKS GN I  N++        L+ +
Sbjct: 612 IAQNIALGKPSSLVRAPFKTLITHGFTLDKNSRKMSKSIGNVIHPNQIIDGTLLPPLKLQ 671

Query: 296 KFGGRSWPAPV----------IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
           K+ GR     V          +RL +  + Y + I      L      L K+  T
Sbjct: 672 KYQGRKEEPKVPLYDALGPDSLRLWVASSDYTKDIIIGEPVLKAVNTSLHKYRMT 726


>gi|207109742|ref|ZP_03243904.1| valyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
          Length = 161

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 48  SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 100

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K    ++   +   A   
Sbjct: 101 ANLCATG---RDIKLSTTHLENNKNFANKIFNAASYLKLKQEAFKD 143


>gi|167770372|ref|ZP_02442425.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
 gi|167667694|gb|EDS11824.1| hypothetical protein ANACOL_01715 [Anaerotruncus colihominis DSM
           17241]
          Length = 879

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 70/203 (34%), Gaps = 39/203 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D    G D+IF      I              + IH    + +GRKMSKS GN I   E+
Sbjct: 487 DTLVTGYDIIFFWVARMIFSGLAHMDEAPFKTVLIHGLVRDAQGRKMSKSLGNGIDPLEI 546

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTSTSKGIID 348
           ++        + A  +R  +   +   P   + F+ +++  +    +K    S       
Sbjct: 547 IDR-------YGADALRFTLATGN--SPGNDMRFSDEKVNASRNFANKIWNASR------ 591

Query: 349 PAVLSALYND--------LNTVS--AIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
             +L  L +D        LN      +     L RE T N +           LG+ V K
Sbjct: 592 -FILMNLSDDVEPGLPETLNIEDKWVLSKYRTLVREVTDNLEKFE--------LGLAVQK 642

Query: 399 --EHLNKNISIAIEKLVQERLIL 419
             + +   +     +L + RL  
Sbjct: 643 LYDFIWDILCDWYIELCKSRLQA 665


>gi|119385062|ref|YP_916118.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
 gi|119374829|gb|ABL70422.1| valyl-tRNA synthetase [Paracoccus denitrificans PD1222]
          Length = 1030

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 11/121 (9%)

Query: 194 WKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
           W+ +  ++  + S  W  G  GW  E +     Y      +   G D+IF      +   
Sbjct: 602 WRDADVLDTWFSSGLWPIGTLGW-PEDTTELRKYFPTS--VLVTGFDIIFFWVARMMMMQ 658

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
                      +++H    + +G KMSKS GN I    L++        + A  +R  + 
Sbjct: 659 LAVVGQVPFRTVYVHGLVRDEKGAKMSKSKGNVIDPLTLID-------EYGADALRFTLT 711

Query: 313 M 313
            
Sbjct: 712 S 712


>gi|18312756|ref|NP_559423.1| isoleucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
 gi|74564220|sp|Q8ZWU4|SYI_PYRAE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
 gi|18160237|gb|AAL63605.1| isoleucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
          Length = 981

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 7/65 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N+ I    L+  G+KMSKS GN I   +L E        + A  +R
Sbjct: 576 LATSVLYTGRAPYKNVLIQGLILDKHGQKMSKSKGNVIWAKDLFE-------KYGADPVR 628

Query: 309 LAMLM 313
           L +L 
Sbjct: 629 LYILS 633


>gi|320165297|gb|EFW42196.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 1632

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 35/116 (30%), Gaps = 12/116 (10%)

Query: 69   VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF--VKDTTRLACLAPTHQPRAT 126
            +R +  +    + R R +H           IT+     F      +            A+
Sbjct: 1038 IRALATVYSGAVFRERHDHAKDLGKMLEWCITNSCATMFQRFVAMSAPMIRPTNPVVGAS 1097

Query: 127  NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----------YGSFSRRKIDE 172
              I  M+ LI   I     Y   +  +FD + I N          YG      IDE
Sbjct: 1098 ERIVAMLDLIMRDIDSDAVYFREDFSVFDGTKIVNVDVVALCVAQYGKLLSVDIDE 1153


>gi|300088361|ref|YP_003758883.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299528094|gb|ADJ26562.1| methionyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 556

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 28/81 (34%), Gaps = 9/81 (11%)

Query: 37  DFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDA 95
           +  H+G+ A   +  D+  R  R    E  V  V         +  RA  E        +
Sbjct: 16  NRLHLGHVAGAYLPADIFARYHRTRGSE--VLMVTGSDRHGTPVTIRAEAE------GKS 67

Query: 96  ISIITSKNTQQFVKDTTRLAC 116
            + +      +FV++ + L  
Sbjct: 68  PAEVADYYHAKFVENWSALGI 88


>gi|239981255|ref|ZP_04703779.1| methionine--tRNA ligase [Streptomyces albus J1074]
          Length = 650

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 38/121 (31%), Gaps = 11/121 (9%)

Query: 28  MYVCGPTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
           ++   PT     H+G+ A P +  D+L R LR    E    YV    D    +   AR  
Sbjct: 131 VFCPPPTPNGGLHLGHLAGPYVRADMLARALRSMGRE--ARYVTGTDDHQSYVAAAARLR 188

Query: 87  HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGH 144
                     + + +      V                A  T H  ++  L++ +     
Sbjct: 189 ------GTTPAEVATAEGDAIVATLRSAGVTLDRLTRPAADTGHGARIRELLEKVAASPA 242

Query: 145 A 145
           A
Sbjct: 243 A 243


>gi|254457829|ref|ZP_05071256.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
 gi|207085222|gb|EDZ62507.1| methionyl-tRNA synthetase [Campylobacterales bacterium GD 1]
          Length = 652

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 7/45 (15%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           +G+   +G KMSKS GN I+  E+ +       ++    +R  ML
Sbjct: 287 HGWWTRDGEKMSKSKGNVISPKEVSD-------AYGVENLRYFML 324


>gi|15791045|ref|NP_280869.1| leucyl-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|169236795|ref|YP_001689995.1| leucyl-tRNA synthetase [Halobacterium salinarum R1]
 gi|48428562|sp|Q9HN72|SYL_HALSA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|10581638|gb|AAG20349.1| leucine-tRNA synthetase [Halobacterium sp. NRC-1]
 gi|167727861|emb|CAP14649.1| leucine--tRNA ligase [Halobacterium salinarum R1]
          Length = 885

 Score = 37.1 bits (85), Expect = 6.7,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 51/145 (35%), Gaps = 28/145 (19%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTH 315
             E  A +      L  +G KMSKS  N +    +++        + A   RL  L    
Sbjct: 551 HREPFAGLTTQGMVLGEDGTKMSKSKDNGVAPERIVD-------EYGADTARLFTLRAAR 603

Query: 316 YREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVL-------------SAL 355
             +   ++ + +  +   L +           +T+ G +DPA               +  
Sbjct: 604 PSKAFPWSEEGVRSSHTFLERLLSMARAVNADATADGDLDPAAEYVARETAATVQAATTH 663

Query: 356 YNDLNTVSAIQALHKLARESTKNHD 380
           ++D+    A+QA+ +L     +  D
Sbjct: 664 FDDMEFNRAVQAVDELVSLLVRYRD 688



 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 19/76 (25%), Gaps = 8/76 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+ R   + D   R  R     + V +              A +   +          
Sbjct: 50  HMGHVRNYAITDAFARYRRMDG--EDVLHPMGWDSFGLPAENAANERDTN------PREW 101

Query: 100 TSKNTQQFVKDTTRLA 115
           T +   Q       L 
Sbjct: 102 TERCIDQMRDQFEALG 117


>gi|330977513|gb|EGH77459.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
           50252]
          Length = 640

 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 295 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 347

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 348 LQRSADAYRRIRNTAR 363


>gi|330686067|gb|EGG97689.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU121]
          Length = 656

 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTELEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
             +          +L         R T   H  Q++  + + ++  G  Y    E  +  
Sbjct: 72  LDEMIAGIKSLWDKLEISNDDF-IRTTEERH-KQVVEKVFERLLKQGDIYLGEYEGWYSV 129

Query: 157 SSIPNY 162
                Y
Sbjct: 130 PDETYY 135


>gi|326422518|gb|EGD71914.1| Aminoacyl-tRNA synthetase class Ia [Candidatus Parvarchaeum
           acidophilus ARMAN-5_'5-way FS']
          Length = 779

 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 8/107 (7%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D++       I ++            WI    L+  G KMSKS GN +    ++E   
Sbjct: 497 GIDIVRTWLNYSILRNYQLTEKLPWKTAWIDGMGLDEHGEKMSKSKGNGVDPTIVIE--- 553

Query: 297 FGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
                + A   R   +          F+  RL  +   L+K    + 
Sbjct: 554 ----KYGADAFRFWAVSEAMPGSNFMFSESRLQGSSKFLTKLWNVAR 596


>gi|296269463|ref|YP_003652095.1| excinuclease ABC subunit B [Thermobispora bispora DSM 43833]
 gi|296092250|gb|ADG88202.1| excinuclease ABC, B subunit [Thermobispora bispora DSM 43833]
          Length = 702

 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 44/136 (32%), Gaps = 23/136 (16%)

Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
            + E     +K    + + GI    +   + + L+T         L RE      LL   
Sbjct: 572 AIDETNRRRAKQLAYNKAHGIDPKPLRKKIADILDT---------LVREDADTAQLLGNG 622

Query: 386 NASAH----ILGI----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
              A     + G+          E+  E   + +   IE L ++        +F  A  +
Sbjct: 623 RQQARGKAPVPGVLSQTPGKHAKEIVGEMPREQLEALIESLTEQMRAAAADLQFELAARL 682

Query: 432 RKQLESKGFILEDYKN 447
           R +++     L D + 
Sbjct: 683 RDEIKELKRELRDMRE 698


>gi|149915811|ref|ZP_01904336.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
 gi|149810393|gb|EDM70238.1| valyl-tRNA synthetase [Roseobacter sp. AzwK-3b]
          Length = 975

 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 10/106 (9%)

Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
             W  G  GW  + +     Y      I   G D+IF      +         +  ++++
Sbjct: 553 GLWPIGTLGWPDD-TEELKKYFPTSVLI--TGFDIIFFWVARMMMMQYAVVGQKPFSHVY 609

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           +H    + +G+KMSKS GN +   +L++        + A  +R  +
Sbjct: 610 VHALVRDEKGKKMSKSLGNVLDPLDLIDD-------YGADAVRFTL 648


>gi|91792159|ref|YP_561810.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
 gi|91714161|gb|ABE54087.1| leucyl-tRNA synthetase [Shewanella denitrificans OS217]
          Length = 872

 Score = 37.1 bits (85), Expect = 6.8,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 47/156 (30%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           N  +     KMSKS  N I    ++E        + A  +RL M+      P    +++ 
Sbjct: 622 NELVYTGMSKMSKSKNNGIDPQTMVE-------KYGADTVRLFMMFA---SPPELTLEWQ 671

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-----------------------ND-- 358
              +  A   + +  + ++      P    AL                        +D  
Sbjct: 672 ESGVEGAHRFIKRLWKLASDHVAAGP--TEALDVSKLSSSQKALRRELHKTIAKVSDDIG 729

Query: 359 ----LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
                NT  A+ A+ +L    +K         A   
Sbjct: 730 RRQMFNT--AVAAVMELMNHLSKAPQDSAQDRALLA 763


>gi|323137277|ref|ZP_08072356.1| Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
           [Methylocystis sp. ATCC 49242]
 gi|322397635|gb|EFY00158.1| Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain
           [Methylocystis sp. ATCC 49242]
          Length = 285

 Score = 36.8 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 37/117 (31%), Gaps = 26/117 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P+   F H+G+A   +   + +RL R   G     ++  I DID     RAR E      
Sbjct: 13  PSPNGFLHLGHAYSAL---LNFRLARECGG----RFLLRIEDIDT---GRARPE------ 56

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
                           +D   L     T   R + H       +  +   G  Y  +
Sbjct: 57  ----------FEAAIHEDLAWLGLAWETPVRRQSEHFDDYARALARLDDMGLLYACD 103


>gi|270666769|ref|ZP_06222445.1| methionine--tRNA ligase [Haemophilus influenzae HK1212]
 gi|270316829|gb|EFA28560.1| methionine--tRNA ligase [Haemophilus influenzae HK1212]
          Length = 148

 Score = 36.8 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 17/111 (15%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A         K  N++ H G++ ++G KMSKS G FI  +  L 
Sbjct: 48  HFIGKDIVYFHSLFWPAMLE-GSGYRKPTNVFAH-GYVTVDGAKMSKSRGTFIQASTYLN 105

Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
                        +R       Y   ++    R+ + +  L  + Q   + 
Sbjct: 106 -------HIDPECLRYY-----YAAKLN---DRIEDLDFNLDDFVQRVNTD 141


>gi|260767228|ref|ZP_05876169.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
 gi|260617736|gb|EEX42914.1| leucyl-tRNA synthetase [Vibrio furnissii CIP 102972]
          Length = 858

 Score = 36.8 bits (84), Expect = 6.8,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 13/143 (9%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
            T   + DP+  + Y      Y     H+G+ R   + DV+ R  R           +N+
Sbjct: 22  KTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARFQRLQG--------KNV 73

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
                        E+ ++  N A +  T +N +        L      ++  AT    + 
Sbjct: 74  MQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYY 133

Query: 130 PQMIYLIQNIILHGHAYEANNEI 152
                    +   G  Y+  + +
Sbjct: 134 RWEQEFFTKLYEKGLVYKKTSSV 156


>gi|317507069|ref|ZP_07964832.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
 gi|316254644|gb|EFV13951.1| valyl-tRNA synthetase [Segniliparus rugosus ATCC BAA-974]
          Length = 886

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 48/182 (26%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S           +W H    + +G+KMSKS GN I   + L+        + A   R 
Sbjct: 514 ATSAQGLAQAPFRELWFHGLVRDEKGQKMSKSKGNVINPLDWLDR-------FGADATRF 566

Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
           A+L                       +         + +   ++A        + +  L 
Sbjct: 567 ALL-----------------------RAVAPGADVPMGESNAIAA-------RNFVTKLF 596

Query: 370 KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI---LLKMKKFS 426
              R          + + +A   G E+ ++ L       + +L + R      L+  +F+
Sbjct: 597 NATR--------FALISGAAEGFGAELAQQSLTDADRWILGRLEEVRAEADSALEAGEFA 648

Query: 427 SA 428
            A
Sbjct: 649 KA 650


>gi|307292797|ref|ZP_07572643.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
 gi|306880863|gb|EFN12079.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
          Length = 520

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 36/126 (28%), Gaps = 11/126 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            HIG+A  +I  D + R  R    +         T  D+  ++ A+              
Sbjct: 18  PHIGHAYEVIATDAIARFQRMMDRDVFFQ-----TGTDEHGLKMAQTARNR---GIEPRE 69

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
           +  + +  F      L         R +   H      + Q +  +G  Y    E  +  
Sbjct: 70  LADEMSSYFKAMNDGLNISY-DRFIRTSEPDHHSASQAIWQAMEANGDLYLGRYEGWYSV 128

Query: 157 SSIPNY 162
                Y
Sbjct: 129 RDEAFY 134


>gi|269792560|ref|YP_003317464.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
 gi|269100195|gb|ACZ19182.1| valyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
          Length = 883

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 42/109 (38%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I             +++IH    +  G+KMSKS GN I   +L+E  
Sbjct: 484 TGFDIIFFWVARMIMMGLEFMGDVPFHHVYIHALVRDERGQKMSKSKGNVIDPLDLIE-- 541

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R+ +  L    R  I  +  R+      L+K    S 
Sbjct: 542 -----KYGADALRMTLAALTVQGR-DICLSASRVETYRFFLNKLWNASR 584


>gi|189083231|sp|Q12R39|SYL_SHEDO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 863

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 46/156 (29%), Gaps = 47/156 (30%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFT 323
           N  +     KMSKS  N I    ++E        + A  +RL M+      P    +++ 
Sbjct: 613 NELVYTGMSKMSKSKNNGIDPQTMVE-------KYGADTVRLFMMFA---SPPELTLEWQ 662

Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-----------------------ND-- 358
              +  A   + +  + ++      P    AL                        +D  
Sbjct: 663 ESGVEGAHRFIKRLWKLASDHVAAGP--TEALDVSKLSSSQKALRRELHKTIAKVSDDIG 720

Query: 359 ----LNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
                NT  A+ A+ +L    +K         A   
Sbjct: 721 RRQMFNT--AVAAVMELMNHLSKAPQDSAQDRALLA 754


>gi|330891592|gb|EGH24253.1| isoleucyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
           301020]
          Length = 634

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
           H   ++  GRKMSKS  N +   ++ ++         A ++RL +  T Y   +  + Q 
Sbjct: 289 HGFVVDENGRKMSKSLNNVVAPQKVNDSLG-------ADIMRLWVSATDYSGEMAVSDQI 341

Query: 327 LTEAEILLSKWPQTST 342
           L  +     +   T+ 
Sbjct: 342 LQRSADAYRRIRNTAR 357


>gi|323451615|gb|EGB07492.1| hypothetical protein AURANDRAFT_71802 [Aureococcus anophagefferens]
          Length = 820

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 28/89 (31%), Gaps = 8/89 (8%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
            H+G+A   +V DV+ R  R +  E        +T  D+   + A               
Sbjct: 118 PHMGHAYEALVTDVVARYWRLWGAETHF-----LTGADEHGQKIANTAAK---EGKRPIE 169

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN 127
           +  +   +F     RL      +    + 
Sbjct: 170 LVDECVAKFKALDARLDVSYDDYLRTTSE 198


>gi|319891443|ref|YP_004148318.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161139|gb|ADV04682.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323465387|gb|ADX77540.1| methionyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
          Length = 657

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 38/127 (29%), Gaps = 15/127 (11%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +     +    
Sbjct: 20  HIGHAYSTVAGDVIARYKRLQGFD-----VRYLTGTDEH---GQKIQEKAQNAGMSELDY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTH----QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
                +       +L           + R T  + ++      ++  G  Y    E  + 
Sbjct: 72  LDGMIKDIKALWEKLDISNDDFIRTTERRHTEVVEKIFE---KLLSKGDIYLGEYEGWYS 128

Query: 156 TSSIPNY 162
                 Y
Sbjct: 129 VPDETFY 135


>gi|314932712|ref|ZP_07840082.1| methionine--tRNA ligase [Staphylococcus caprae C87]
 gi|313654542|gb|EFS18294.1| methionine--tRNA ligase [Staphylococcus caprae C87]
          Length = 657

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 21  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTELEY 72

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
             +          +L         R T   H  Q++  + + ++  G  Y    E  +  
Sbjct: 73  LDEMIAGIKSLWDKLEISNDDF-IRTTEERH-KQVVEKVFERLLKQGDIYLGEYEGWYSV 130

Query: 157 SSIPNY 162
                Y
Sbjct: 131 PDETYY 136


>gi|299119337|gb|ADJ11471.1| GA17300 [Drosophila pseudoobscura]
          Length = 134

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 47/141 (33%), Gaps = 37/141 (26%)

Query: 239 DLIFPHHE----NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
           DLI  H      N  A         K       NG L L   KMSKS+GNF+T+ + +E 
Sbjct: 2   DLINNHLTFTLYNHAAIW--PKDDTKWPKGMRVNGHLLLNSAKMSKSDGNFLTLTDAVEK 59

Query: 295 KKFGGRS-------------------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
               G                       A ++RL          I++  + L E +  L 
Sbjct: 60  FSADGMRLCLADAGDSIEDANFVESTADAGILRLFTF-------IEWVKEML-ETKSTLR 111

Query: 336 KWPQTSTSKGIIDPAVLSALY 356
           K      ++   D   LS L 
Sbjct: 112 K----GAARTFNDQVFLSELN 128


>gi|291455990|ref|ZP_06595380.1| valyl-tRNA synthetase [Bifidobacterium breve DSM 20213]
 gi|291382399|gb|EFE89917.1| valyl-tRNA synthetase [Bifidobacterium breve DSM 20213]
          Length = 911

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          PTV    H+G+       DV+ R  R    +
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD 87


>gi|145346067|ref|XP_001417517.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144577744|gb|ABO95810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 573

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 15/99 (15%)

Query: 233 IHGGGLDLIFPHHENEIAQSCC--ADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITIN 289
           +H  G D+I+ H         C               +GF+  + G+KMSKS GN +  N
Sbjct: 326 VHIIGKDIIWFH----CVIWPCMLWSAGLPLPKTVFGHGFVTADDGQKMSKSIGNVVDPN 381

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRL 327
           ++L       + + +   R  ++    Y   + F+   +
Sbjct: 382 DVL-------KRFSSDTFRYYLMRCGVYGADVPFSEPAM 413


>gi|227545731|ref|ZP_03975780.1| valine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
          55813]
 gi|312133397|ref|YP_004000736.1| vals [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482768|ref|ZP_07941780.1| anticodon-binding domain-containing protein [Bifidobacterium sp.
          12_1_47BFAA]
 gi|322688413|ref|YP_004208147.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
 gi|322690432|ref|YP_004220002.1| valyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
          1217]
 gi|90103528|sp|Q8G777|SYV_BIFLO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
          ligase; Short=ValRS
 gi|227213847|gb|EEI81686.1| valine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
          55813]
 gi|291517529|emb|CBK71145.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
 gi|311772623|gb|ADQ02111.1| ValS [Bifidobacterium longum subsp. longum BBMN68]
 gi|316915803|gb|EFV37213.1| anticodon-binding domain-containing protein [Bifidobacterium sp.
          12_1_47BFAA]
 gi|320455288|dbj|BAJ65910.1| valyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
          1217]
 gi|320459749|dbj|BAJ70369.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
          Length = 911

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          PTV    H+G+       DV+ R  R    +
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD 87


>gi|89898198|ref|YP_515308.1| leucyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
 gi|123722314|sp|Q254X5|SYL_CHLFF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|89331570|dbj|BAE81163.1| leucyl tRNA synthetase [Chlamydophila felis Fe/C-56]
          Length = 820

 Score = 36.8 bits (84), Expect = 6.9,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 42/139 (30%), Gaps = 18/139 (12%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      +         
Sbjct: 48  HVGHLIGYTATDIVARYKRAKGF--SVLHPMGWDSFGLPAEQYA------VRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN + F K  + +       +  AT   P+     Q     +   G AY A+      
Sbjct: 100 TQKNIENFRKQLSAMGFSYDEGREFAT-SDPEYYRWTQKLFLLLYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQ 173
            +  P  G+  S  +++  
Sbjct: 155 VNYCPELGTVLSNEEVENG 173


>gi|312882703|ref|ZP_07742440.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369664|gb|EFP97179.1| leucyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 857

 Score = 36.8 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 13/143 (9%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
            T   + DP+  + Y      Y     H+G+ R   + DV+ R  R           +N+
Sbjct: 22  KTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQG--------KNV 73

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
                        E+ ++  N A +  T +N +        L      ++  AT    + 
Sbjct: 74  MQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCTPEYY 133

Query: 130 PQMIYLIQNIILHGHAYEANNEI 152
                    +   G  Y+  + +
Sbjct: 134 RWEQEFFTKLYEKGLVYKKTSSV 156


>gi|296453432|ref|YP_003660575.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
          [Bifidobacterium longum subsp. longum JDM301]
 gi|296182863|gb|ADG99744.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
          [Bifidobacterium longum subsp. longum JDM301]
          Length = 911

 Score = 36.8 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          PTV    H+G+       DV+ R  R    +
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD 87


>gi|213691193|ref|YP_002321779.1| tRNA synthetase, valyl/leucyl, anticodon-binding [Bifidobacterium
          longum subsp. infantis ATCC 15697]
 gi|254783552|sp|B7GTW0|SYV_BIFLI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
          ligase; Short=ValRS
 gi|213522654|gb|ACJ51401.1| tRNA synthetase, valyl/leucyl, anticodon-binding [Bifidobacterium
          longum subsp. infantis ATCC 15697]
 gi|320457252|dbj|BAJ67873.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
          15697]
          Length = 911

 Score = 36.8 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          PTV    H+G+       DV+ R  R    +
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD 87


>gi|126656215|ref|ZP_01727599.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
 gi|126622495|gb|EAZ93201.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
          Length = 535

 Score = 36.8 bits (84), Expect = 7.0,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 34/83 (40%), Gaps = 9/83 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             ++H  G D++  H     A    A+           +GFL  +G+KM KS GN +   
Sbjct: 262 PINLHLIGKDILRFHAIYWPAMLMSANL--PLPEQIFGHGFLTKDGQKMGKSLGNTLDPF 319

Query: 290 ELLETKKFGGRSWPAPVIRLAML 312
           +L++        + +  +R   L
Sbjct: 320 DLVD-------KYGSDSVRYYFL 335


>gi|288818399|ref|YP_003432747.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|288787799|dbj|BAI69546.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
 gi|308751991|gb|ADO45474.1| tRNA synthetase valyl/leucyl anticodon-binding protein
           [Hydrogenobacter thermophilus TK-6]
          Length = 289

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 38/148 (25%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL 334
            KMSKS GN +   E ++T       + A  +RL +L      +  ++T + +  A   L
Sbjct: 44  AKMSKSKGNTVDPEEAIKT-------YGADTVRLYILFAAPVEKDFEWTDEGVQGAYRFL 96

Query: 335 SKW---------------------------PQTSTSKGIIDPAVLSALYN-DLNTVSA-- 364
            +                             +      +     L+ + +   NT  A  
Sbjct: 97  KRLWNFFHQHLEKINVNYKREDLAHLDETARELRRKTHLTLKKYLADMEDLSFNTAIAGI 156

Query: 365 IQALHKLARESTKNHDLLPIFNASAHIL 392
           ++ L+ L     +      +   +  IL
Sbjct: 157 MELLNTLEGFKLRTDSHYKVLREAVEIL 184


>gi|239622594|ref|ZP_04665625.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
          CCUG 52486]
 gi|239514591|gb|EEQ54458.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
          CCUG 52486]
          Length = 911

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          PTV    H+G+       DV+ R  R    +
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD 87


>gi|57641170|ref|YP_183648.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
 gi|68753983|sp|Q5JGH7|SYR_PYRKO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|57159494|dbj|BAD85424.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
          Length = 642

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 38  FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
             H+G+AR  ++ D + R++R          V+N   IDD  ++ A+     + + +   
Sbjct: 138 PLHMGHARNAVLGDTMARIMRKLGY---TVEVQNY--IDDLGVQFAQVLWGYLNLKEEFE 192

Query: 98  II-TSKNTQQFVKDT 111
            I      +   +D 
Sbjct: 193 RIEAELREKGLKEDF 207


>gi|23335631|ref|ZP_00120865.1| COG0525: Valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|189440059|ref|YP_001955140.1| valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
 gi|254783551|sp|B3DU23|SYV_BIFLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
          ligase; Short=ValRS
 gi|189428494|gb|ACD98642.1| Valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
          Length = 911

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          PTV    H+G+       DV+ R  R    +
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD 87


>gi|288940654|ref|YP_003442894.1| leucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
 gi|288896026|gb|ADC61862.1| leucyl-tRNA synthetase [Allochromatium vinosum DSM 180]
          Length = 851

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 39/140 (27%), Gaps = 15/140 (10%)

Query: 22  DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
           DPS  + Y      Y     H+G+ R   + DV+ R  R     K V             
Sbjct: 29  DPSREKFYCLSMFPYPSGRLHMGHVRNYTIGDVIARYQRMLG--KNVLQPMGWDAFGLPA 86

Query: 80  IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP----QMIYL 135
              A      I      S  T  N +        L       +  AT        +    
Sbjct: 87  ENAA------IQHGIPPSQWTRSNIEYMKGQLKSLGFGYDWERELATCDPDYYRWEQWLF 140

Query: 136 IQNIILHGHAYEANNEIIFD 155
              ++  G AY A   + +D
Sbjct: 141 T-RMVEKGLAYRAKATVNWD 159


>gi|239637538|ref|ZP_04678510.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
 gi|239596756|gb|EEQ79281.1| valyl-tRNA synthetase [Staphylococcus warneri L37603]
          Length = 876

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 19/129 (14%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I Q           ++ +H      +GRKMSKS GN +   ++++  
Sbjct: 479 TGYDIIFFWVARMIFQGLEFTDRRPFNDVLLHGLVRAEDGRKMSKSLGNGVDPMDVID-- 536

Query: 296 KFGGRSWPAPVIRLAMLMTH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
                 + A  +R  +       + + ++ +++      ++K         I + A  S 
Sbjct: 537 -----EYGADSLRYFLATGSAPGQDLRYSTEKVESVWNFINK---------IWNAARFSL 582

Query: 355 LY--NDLNT 361
           +    D N 
Sbjct: 583 MNIGEDFNV 591


>gi|257784334|ref|YP_003179551.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
 gi|257472841|gb|ACV50960.1| arginyl-tRNA synthetase [Atopobium parvulum DSM 20469]
          Length = 614

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 45/143 (31%), Gaps = 11/143 (7%)

Query: 37  DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN----ITDIDDKIIERARQEHPSIPI 92
              HIG+ R   + D L R+L +   E    Y  N      D+    I +   +   I  
Sbjct: 132 GPLHIGHGRWAALGDSLSRILAFAGYEVEREYYVNDHGSQMDVFGHSISKRYLQLIDIMQ 191

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
              I   T+       +D            P       + I       L G+AY  +  +
Sbjct: 192 KRGIDADTAAQVLA--EDRNAYVADEDDAHPEEHPFTDEFIN-----SLGGNAYAGDYIV 244

Query: 153 IFDTSSIPNYGSFSRRKIDEQKM 175
                 + N G     K ++++M
Sbjct: 245 DLGLFFLKNDGELWANKSEDERM 267


>gi|119476462|ref|ZP_01616813.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
 gi|119450326|gb|EAW31561.1| Methionyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
          Length = 680

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A    A   +  A I+ H GF+ + G+KMSKS G FI  +  LE
Sbjct: 295 HFIGKDIINFHGLFWPAMLHSAGYRKPNA-IFAH-GFITVNGKKMSKSRGTFIMASTYLE 352

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 353 -------HLDPEYLRYY 362


>gi|54294866|ref|YP_127281.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
 gi|53754698|emb|CAH16185.1| hypothetical protein lpl1945 [Legionella pneumophila str. Lens]
          Length = 519

 Score = 36.8 bits (84), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 44/115 (38%), Gaps = 22/115 (19%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
            V  I   G+D   P   + I  S    + +   + ++ N F  L+G K S S  + I +
Sbjct: 275 DVITISSFGIDNSIPFLSSSIGVSSACPQYKPF-DYYLVNYFYYLDGNKFSTSRQHMIGV 333

Query: 289 NELLETKKFGGRSWPAPVIRLAMLM---TH-------------YREPIDFTVQRL 327
            +++  K+       + ++RL +      H             Y + ID+  + +
Sbjct: 334 KDIITCKEL-----SSDLVRLFLAAIDVRHQTGDFLTDEFIYYYNQTIDWLEELV 383


>gi|260220490|emb|CBA28079.1| Isoleucyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
           magnipapillata]
          Length = 978

 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 7/88 (7%)

Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           C          +  H    + +GRKMSKS GN +    +            A ++RL + 
Sbjct: 629 CALYDRAPYRGLLTHGFATDGQGRKMSKSLGNTVEPQTITSKMG-------AEIVRLWVA 681

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT 340
            T Y   ++   + L        +   T
Sbjct: 682 STDYSGDLNIDDKILARVVDTYRRVRNT 709


>gi|296394167|ref|YP_003659051.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
 gi|296181314|gb|ADG98220.1| valyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
          Length = 902

 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 7/66 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
            AQ+           +W H    + +G+KMSK+ GN I   + L+        + A   R
Sbjct: 507 AAQAQRPLAQAPFRQLWFHGLVRDEKGQKMSKTKGNVINPLDWLDR-------FGADATR 559

Query: 309 LAMLMT 314
            A+L  
Sbjct: 560 FALLRG 565


>gi|223044412|ref|ZP_03614445.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
 gi|222442201|gb|EEE48313.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
          Length = 656

 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 13/126 (10%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   +  DV+ R  R    +     VR +T  D+      + +  +          
Sbjct: 20  HIGHAYSTVAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKTELEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLI-QNIILHGHAYEANNEIIFDT 156
             +          +L         R T   H  Q++  + + ++  G  Y    E  +  
Sbjct: 72  LDEMIAGIKSLWDKLEISNDDF-IRTTEERH-KQVVEKVFERLLKQGDIYLGEYEGWYSV 129

Query: 157 SSIPNY 162
                Y
Sbjct: 130 PDETYY 135


>gi|207092570|ref|ZP_03240357.1| valyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
          Length = 643

 Score = 36.8 bits (84), Expect = 7.2,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K    ++   +   A   
Sbjct: 559 ANLCATG---RDIKLSTTHLENNKNFANKIFNAASYLKLKQEAFKD 601


>gi|322804370|emb|CBZ01920.1| isoleucyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 1038

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 11/112 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  +  P  F+ + + E +         ST   +    VL A  ++ N
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQRKF-----LSTLWNVYSFYVLYADLDNFN 662


>gi|299748167|ref|XP_001837509.2| RUM1 [Coprinopsis cinerea okayama7#130]
 gi|298407846|gb|EAU84425.2| RUM1 [Coprinopsis cinerea okayama7#130]
          Length = 1994

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 21/157 (13%), Positives = 39/157 (24%), Gaps = 20/157 (12%)

Query: 270  FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
             +N    K+ + + N  T+ E+ +                        + + F   RL E
Sbjct: 1083 LVNELDEKLEEGDENSFTLEEVRQLLTRARSCGLPSD----------NKHMQFLEARLRE 1132

Query: 330  AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
                  +              +      D N       + +L     K  D      A  
Sbjct: 1133 GNTWEERARAVLEQPIKTIAELEEFADMDSNIPIDPTIIDRLMAARAKALDFKKQAKAWL 1192

Query: 390  HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
                 +  K  +++ +          RL     K FS
Sbjct: 1193 ACADADGPKSRISEAL----------RLAARSEKDFS 1219


>gi|254456247|ref|ZP_05069676.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
 gi|207083249|gb|EDZ60675.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
          Length = 494

 Score = 36.8 bits (84), Expect = 7.3,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 72/192 (37%), Gaps = 28/192 (14%)

Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
           IH  G D++  H     A    A     T      +G++  +  KMSKS GN +   E++
Sbjct: 239 IHLIGKDILRFHAVYWPAFLLAAKIELPTKVY--GHGWILSDNEKMSKSKGNILDPLEII 296

Query: 293 ETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
                  + +    +R  ++    +    + + +RL +           + + G +   V
Sbjct: 297 -------KEYGLDPLRYYLIKEVSFGNDGNISQERLEDCINS-----DLANNFGNLCQRV 344

Query: 352 LSALYNDLNTVSAIQALH-KLARESTKNHDLLPIFNASAHILGIEVCKEHL-NKNISIAI 409
                    T  AI+    K+ ++     + L I N   +   +E  +E + N++I+  I
Sbjct: 345 ---------TAFAIKNCESKIPKQIDFQKEDLEILNKYMN--NLENIREKIDNQDINFYI 393

Query: 410 EKLVQERLILLK 421
           + ++       K
Sbjct: 394 DYIINSLFEANK 405


>gi|300173565|ref|YP_003772731.1| isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
 gi|299887944|emb|CBL91912.1| Isoleucyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
          Length = 930

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 38/116 (32%), Gaps = 16/116 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N+      L+ +G KMSKS GN I+  ++ +            ++RL  
Sbjct: 572 SVAVTGHAPYKNVLSQGFTLDGKGNKMSKSLGNTISPLDVADKMGI-------EILRLWT 624

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQ 366
           +     + +  +   L +      K   T           L A   D N T  AI 
Sbjct: 625 ISVDTSQDMPVSNDILKQVSESYRKLRNTLR--------FLMANTADFNYTTDAIT 672


>gi|296445331|ref|ZP_06887289.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296257092|gb|EFH04161.1| leucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 871

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 2/52 (3%)

Query: 14 KITEFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
          +   F   DP   + YV    P      H+G+ R   + DV+ R  R    +
Sbjct: 21 ERRAFACGDPQKPKYYVLEMFPYPSGRIHVGHVRNYSMGDVIARYKRAKGFD 72


>gi|188534474|ref|YP_001908271.1| leucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
 gi|238689681|sp|B2VBM4|SYL_ERWT9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|188029516|emb|CAO97393.1| Leucyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
          Length = 860

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 29/105 (27%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D    + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKQTFKVTEDEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYANIDYMKNQLKLLG 116


>gi|74318463|ref|YP_316203.1| leucyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
 gi|123758998|sp|Q3SG58|SYL_THIDA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|74057958|gb|AAZ98398.1| leucyl-tRNA synthetase, class Ia [Thiobacillus denitrificans ATCC
           25259]
          Length = 857

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 45/141 (31%), Gaps = 37/141 (26%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILL 334
            KMSKS  N +    L++        + A   RL  M      + ++++   +  A   L
Sbjct: 619 EKMSKSKNNGVDPQALID-------QYGADTARLFTMFAAPPEQSLEWSDAGVEGAHRFL 671

Query: 335 SKWPQT----------STSKGIIDPAVLSAL-----------YND------LNTVSAIQA 367
            +  +T           T  G   P  L AL            +D       NT  AI A
Sbjct: 672 RRLWKTVYEHVQAGPVVTRAGGALPEPLKALRRQLHQTIQKVGDDIERRKQFNT--AIAA 729

Query: 368 LHKLARESTKNHDLLPIFNAS 388
           + +L     K   +     A 
Sbjct: 730 VMELMNALAKLDGMDADTRAV 750


>gi|1149664|emb|CAA60232.1| ileS [Clostridium perfringens]
          Length = 138

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 11/112 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+ +G KMSKS GN +   E+L+++      W      
Sbjct: 24  LAISTAIFNRNPFENCIVLGHVLDKKGLKMSKSKGNVVDPFEVLDSQGADATRWH----- 78

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  +  P  F+++ + E +         ST   +    VL A+ ++ N
Sbjct: 79  FYTASAPW-LPTRFSIEDVAETQR-----KSLSTLWNVYSFYVLYAVLDNFN 124


>gi|310659347|ref|YP_003937068.1| leucyl-tRNA synthetase [Clostridium sticklandii DSM 519]
 gi|308826125|emb|CBH22163.1| leucyl-tRNA synthetase [Clostridium sticklandii]
          Length = 800

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 48/138 (34%), Gaps = 25/138 (18%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-ML 312
                E  A    H   L     KMSKS GN +  +E++E        + A   R+  M 
Sbjct: 556 VVTNPEPYAKRTSHGMILGENNEKMSKSRGNVVNPDEIVE-------EYGADTFRMYEMF 608

Query: 313 MTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGIIDPAVLSALY-------ND---- 358
           +  + + + ++   +      + +     +    + I    + S+L+        D    
Sbjct: 609 IGDFEKSVPWSSLGIKGCRRFIERTWKLQEMIREEDIFSDKIESSLHKTIKKVTEDYETL 668

Query: 359 -LNTVSAIQALHKLARES 375
             NT  AI A+  L  E 
Sbjct: 669 KFNT--AIAAMMSLINEI 684


>gi|167044267|gb|ABZ08947.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
           marine crenarchaeote HF4000_APKG5N21]
          Length = 1066

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 15/71 (21%)

Query: 263 NIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE--- 318
           N ++  G +  E G KMSKS GN +   +LL+        +P  ++R   +   ++    
Sbjct: 584 NSFLFQGHVLDEKGNKMSKSTGNVLDAADLLD-------KYPVDLVRFYFM---WKSSPI 633

Query: 319 -PIDFTVQRLT 328
             ++F+ + L 
Sbjct: 634 ETLNFSTKELM 644


>gi|170759745|ref|YP_001785428.1| isoleucyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169406734|gb|ACA55145.1| isoleucine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
          Length = 1038

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 11/112 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  +  P  F+ + + E +         ST   +    VL A  ++ N
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQRKF-----LSTLWNVYSFYVLYADLDNFN 662


>gi|170756964|ref|YP_001779726.1| isoleucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169122176|gb|ACA46012.1| isoleucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 1038

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 11/112 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  +  P  F+ + + E +         ST   +    VL A  ++ N
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQRKF-----LSTLWNVYSFYVLYADLDNFN 662


>gi|167957353|ref|ZP_02544427.1| isoleucyl-tRNA synthetase [candidate division TM7 single-cell
           isolate TM7c]
          Length = 418

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 27/135 (20%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI----DF-----TV 324
           +GRKMSKS GNF   NEL++        + A  +R  +L      P+    DF     +V
Sbjct: 39  DGRKMSKSLGNFTDPNELMD-------KFSADSLRFLLLS----SPLLNGEDFALHDKSV 87

Query: 325 QRLTEAEILLSKWPQTSTSKGIID-PAVLSALYNDLNT---VSAI---QALHKLARESTK 377
             +     ++       T    +D       L + LN       I     LH+L  E  +
Sbjct: 88  GDVARKLAMIWNMYDFFTMYAEVDGWEFYGELKDPLNEMTNPLDIWIVSRLHQLVAEVER 147

Query: 378 NHDLLPIFNASAHIL 392
           + D   I +A + IL
Sbjct: 148 HMDAYNIPDALSPIL 162


>gi|222479318|ref|YP_002565555.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
 gi|222452220|gb|ACM56485.1| isoleucyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
          Length = 1050

 Score = 36.8 bits (84), Expect = 7.4,   Method: Composition-based stats.
 Identities = 32/191 (16%), Positives = 63/191 (32%), Gaps = 41/191 (21%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
            A        + +H    +  GRKMSKS GN +T  E +E             +R  +L 
Sbjct: 580 AAVGEIPYEEVLMHGFANDENGRKMSKSVGNIVTPEEAIERAGRDP-------LRTYLLS 632

Query: 314 T-HYREPIDFTVQRLTEAEILLS------KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
                  + F    L E +  L+      ++P         DPA   A  +D      ++
Sbjct: 633 HDQQGVDLAFEWDGLGELQGKLNILWNVFRFPLEYMDLDGYDPA--EADLDD----GELE 686

Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI-------- 418
            + +      ++ +              EV +   +  +S A+  +++            
Sbjct: 687 LVDEWVLSRLQSVET-------------EVTEAWADYRVSDAVNAVIEFVTQDVSRFYVK 733

Query: 419 LLKMKKFSSAD 429
            ++ + +  AD
Sbjct: 734 AVRDRMWEEAD 744


>gi|315180853|gb|ADT87767.1| leucyl-tRNA synthetase [Vibrio furnissii NCTC 11218]
          Length = 858

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 45/143 (31%), Gaps = 13/143 (9%)

Query: 15  ITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
            T   + DP+  + Y      Y     H+G+ R   + DV+ R  R           +N+
Sbjct: 22  KTFVVSEDPNKEKFYCLSMFPYPSGRLHMGHVRNYTIGDVVARFQRLQG--------KNV 73

Query: 73  TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHI 129
                        E+ ++  N A +  T +N +        L      ++  AT    + 
Sbjct: 74  MQPIGWDAFGLPAENAAVKNNTAPAPWTYENIEYMKNQLKLLGFGYDWNREFATCRPEYY 133

Query: 130 PQMIYLIQNIILHGHAYEANNEI 152
                    +   G  Y+  + +
Sbjct: 134 RWEQEFFTKLYEKGLVYKKTSSV 156


>gi|306834438|ref|ZP_07467552.1| glutamate--tRNA ligase [Streptococcus bovis ATCC 700338]
 gi|304423424|gb|EFM26576.1| glutamate--tRNA ligase [Streptococcus bovis ATCC 700338]
          Length = 494

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 78/456 (17%), Positives = 142/456 (31%), Gaps = 86/456 (18%)

Query: 23  PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---- 77
           P  IR+ Y   PT     HIGNAR  +     Y   R++ G+    +V  I D D     
Sbjct: 11  PKKIRVRYAPSPT--GLLHIGNARTALF---NYLYARHHGGD----FVIRIEDTDRKRHV 61

Query: 78  KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
           +  ER++ E+      D       +  +++ +                +  +      I 
Sbjct: 62  EDGERSQLENLKWLGMDWDESP--QTHEKYRQ----------------SERLDIYQKYID 103

Query: 138 NIILHGHA---YEANNEIIFDTSSIPNYGSFSR-----RKIDEQKMGTRVPEKYHKKNPA 189
            ++  G A   Y    E+  +       G   R       + E +    + E+  K    
Sbjct: 104 QLLAEGKAYKSYVTEEELAAERERQEAAGETPRYINEFLGMSEDEKAAYIAEREAKGIVP 163

Query: 190 DFIL---------WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-LGKVFDIHGGGLD 239
              L         W      +  +E   G     W I+       Y    V D H   + 
Sbjct: 164 TVRLAVNESGIYKWHDIVKGDIEFEG--GNIGGDWVIQKKDGYPTYNFAVVVDDHLMEIS 221

Query: 240 LIFP---HHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLET 294
            +     H  N   Q    + +   A  + H   +  +  G+K+SK + N      L   
Sbjct: 222 HVIRGDDHIANTPKQLMVYEALGWEAPEFGHMTLIINSETGKKLSKRDTNT-----LQFI 276

Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
           + +  + +    +   + +  +    +   F+ + L    I L    + S S    D   
Sbjct: 277 EDYRKKGYMPEAVFNFIALLGWNPGGEDEIFSREEL----IKLFDENRLSKSPAAFDQKK 332

Query: 352 LSALYN------DLNTVSAIQA--LHKLARESTKNHDLLPI----FNASAHI-----LGI 394
           +  + N      D +T+ A+    L +  R + K   L+ +      +   I     L  
Sbjct: 333 MDWMSNEYIKNADFDTIFAMAKPFLEEAGRLTDKAEKLVELYKPQMKSVDEIIPLTDLFF 392

Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
           E   E  +        + V   L   K K  + +D 
Sbjct: 393 EDFPELTDAEKEFMAGETVPIVLEAFKAKLEAMSDE 428


>gi|303231911|ref|ZP_07318620.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
 gi|302513440|gb|EFL55473.1| methionine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
          Length = 649

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 7/48 (14%)

Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
             +G++ ++G KMSKS GN I  N L++        + A  +R  +L 
Sbjct: 289 FGHGWMIVDGTKMSKSLGNVIDPNPLIDI-------YGADSLRYYLLS 329


>gi|253682435|ref|ZP_04863232.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
 gi|253562147|gb|EES91599.1| leucine--tRNA ligase [Clostridium botulinum D str. 1873]
          Length = 812

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 32/82 (39%), Gaps = 9/82 (10%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I  ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTIAPDDYI-------KEYGADVFRMYLMFGFAYSEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQTSTSKGI 346
             +      + K  +       
Sbjct: 614 DAIKSMGRFIDKVERLLDDAKE 635


>gi|168182292|ref|ZP_02616956.1| isoleucine--tRNA ligase [Clostridium botulinum Bf]
 gi|237793417|ref|YP_002860969.1| isoleucyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
 gi|182674599|gb|EDT86560.1| isoleucine--tRNA ligase [Clostridium botulinum Bf]
 gi|229262215|gb|ACQ53248.1| isoleucine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
          Length = 1038

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 11/112 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  +  P  F+ + + E +         ST   +    VL A  ++ N
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQRKF-----LSTLWNVYSFYVLYADLDNFN 662


>gi|153938315|ref|YP_001389462.1| isoleucyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|152934211|gb|ABS39709.1| isoleucine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317566|gb|ADF97943.1| isoleucine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 1038

 Score = 36.8 bits (84), Expect = 7.5,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 11/112 (9%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                  +  P  F+ + + E +         ST   +    VL A  ++ N
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQRKF-----LSTLWNVYSFYVLYADLDNFN 662


>gi|326622392|gb|EGE28737.1| Aminoacyl-tRNA synthetase, class Ia [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 941

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 101 EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 152

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 153 NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 197


>gi|322383210|ref|ZP_08057021.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321152479|gb|EFX45265.1| valyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 906

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++ +H    + EGRKMSKS GN I   E++       + + A  +R  M
Sbjct: 526 SLEFTGQIPFKDVLVHGLVRDAEGRKMSKSLGNGIDPLEVI-------KQYGADAMRY-M 577

Query: 312 LMTHYR--EPIDFTVQRLTEAEILLSKWPQTST 342
           L T     + + F  +R+ +A    +K    S 
Sbjct: 578 LSTSSTPGQDLRFRWERVEQARNFANKIWNASR 610


>gi|310642970|ref|YP_003947728.1| isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
 gi|309247920|gb|ADO57487.1| Isoleucyl-tRNA synthetase 2 [Paenibacillus polymyxa SC2]
          Length = 1029

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S           +      L+ +G+KMSKS GN I   E+++        +     R
Sbjct: 561 LAVSTMLTGKAPYKAVMATGHVLDEQGQKMSKSKGNVIDPWEVID-------EYGTDAFR 613

Query: 309 LAMLMTHYREPID---FTVQRLTEAEILL 334
            A+L      P +   F+   + EA+  L
Sbjct: 614 WALLSDS--APWNSKRFSKGIVGEAKSKL 640


>gi|308069864|ref|YP_003871469.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA
           ligase) [Paenibacillus polymyxa E681]
 gi|305859143|gb|ADM70931.1| Isoleucyl-tRNA synthetase, mupirocin resistant (Isoleucine--tRNA
           ligase) [Paenibacillus polymyxa E681]
          Length = 1029

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 35/89 (39%), Gaps = 12/89 (13%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S           +      L+ +G+KMSKS GN I   E+++        +     R
Sbjct: 561 LAVSTMLTGKAPYKAVMATGHVLDEQGQKMSKSKGNVIDPWEVID-------EYGTDAFR 613

Query: 309 LAMLMTHYREPID---FTVQRLTEAEILL 334
            A+L      P +   F+   + EA+  L
Sbjct: 614 WALLSDS--APWNSKRFSKGIVGEAKSKL 640


>gi|315587041|gb|ADU41422.1| valine--tRNA ligase [Helicobacter pylori 35A]
          Length = 872

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSTAHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|290559236|gb|EFD92582.1| tRNA synthetase valyl/leucyl anticodon-binding [Candidatus
           Parvarchaeum acidophilus ARMAN-5]
          Length = 495

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 8/107 (7%)

Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
           G+D++       I ++            WI    L+  G KMSKS GN +    ++E   
Sbjct: 213 GIDIVRTWLNYSILRNYQLTEKLPWKTAWIDGMGLDEHGEKMSKSKGNGVDPTIVIE--- 269

Query: 297 FGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTST 342
                + A   R   +          F+  RL  +   L+K    + 
Sbjct: 270 ----KYGADAFRFWAVSEAMPGSNFMFSESRLQGSSKFLTKLWNVAR 312


>gi|267992383|gb|ACY87268.1| hypothetical protein STM14_0756 [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|323128965|gb|ADX16395.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 941

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 101 EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 152

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 153 NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 197


>gi|296126295|ref|YP_003633547.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
 gi|296018111|gb|ADG71348.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
          Length = 651

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 51/154 (33%), Gaps = 52/154 (33%)

Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
            ++ H   L  +G+KMSKS GN +  N L++        +    +R  ++       I+F
Sbjct: 291 KVFGHGWVLFDDGKKMSKSRGNVVDPNTLID-------KYGVDALRYFLMR-----EINF 338

Query: 323 TVQRLTEAEILLSK------------WPQTSTSKG------------------------- 345
                   E+ L +            W + +T  G                         
Sbjct: 339 GSDGYYSQELFLKRINSDLANDYGNLWHRITTMLGKYFNGVLPDEAESVFGDREKELKKM 398

Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
              +D  V SAL +      A+  + ++ R + K
Sbjct: 399 VLTLDANVESAL-DSFKFHEALSYIWEVIRMTNK 431


>gi|167465172|ref|ZP_02330261.1| valyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 853

 Score = 36.8 bits (84), Expect = 7.6,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 10/93 (10%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          ++ +H    + EGRKMSKS GN I   E++       + + A  +R  M
Sbjct: 473 SLEFTGQIPFKDVLVHGLVRDAEGRKMSKSLGNGIDPLEVI-------KQYGADAMRY-M 524

Query: 312 LMTHYR--EPIDFTVQRLTEAEILLSKWPQTST 342
           L T     + + F  +R+ +A    +K    S 
Sbjct: 525 LSTSSTPGQDLRFRWERVEQARNFANKIWNASR 557


>gi|312277854|gb|ADQ62511.1| Methionyl-tRNA synthetase MetG [Streptococcus thermophilus ND03]
          Length = 667

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   I  DVL R  R    +  V Y+  + +   KI +RA +   +         +
Sbjct: 19  HIGSAYTTIACDVLARYKRMMNYD--VFYLTGLDEHGQKIQQRAEEAGITPQEYVDSMAV 76

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLI-QNIILHGHAYEANNEIIFDTS 157
                   VKD  +L  ++     R T ++  +++  + + ++  G  Y       +  S
Sbjct: 77  G-------VKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSGWYSVS 129


>gi|28210025|ref|NP_780969.1| isoleucyl-tRNA synthetase [Clostridium tetani E88]
 gi|28202460|gb|AAO34906.1| isoleucyl-tRNA synthetase [Clostridium tetani E88]
          Length = 1047

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S          N  +    L+  G KMSKS GN +   ++L++       W       
Sbjct: 574 AISTAIFDTNPFENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLDSAGADASRWH-----F 628

Query: 310 AMLMTHYREPIDFTVQRLTEAEI 332
                 +  P  F+ + + E + 
Sbjct: 629 YTASAPW-LPTRFSPEDVEETQR 650


>gi|171910359|ref|ZP_02925829.1| hypothetical protein VspiD_04285 [Verrucomicrobium spinosum DSM
           4136]
          Length = 870

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 4/103 (3%)

Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
            ++  A   L K  Q + S+        + L   L+T   +    K+A  +     L   
Sbjct: 315 DQMELARKALEKLDQQAVSEAKKIEETSNQLSEKLDTQDLLSKADKVAEVADTQQALADK 374

Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
             A A    +    + + +N +   E+  Q R +  K++  + 
Sbjct: 375 MEALAE--NLTAQAKQIAENDASQPER--QARALAEKLQDLAK 413


>gi|55822425|ref|YP_140866.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
 gi|55738410|gb|AAV62051.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
          Length = 667

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   I  DVL R  R    +  V Y+  + +   KI +RA +   +         +
Sbjct: 19  HIGSAYTTIACDVLARYKRMMNYD--VFYLTGLDEHGQKIQQRAEEAGITPQEYVDSMAV 76

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLI-QNIILHGHAYEANNEIIFDTS 157
                   VKD  +L  ++     R T ++  +++  + + ++  G  Y       +  S
Sbjct: 77  G-------VKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSGWYSVS 129


>gi|55820534|ref|YP_138976.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
 gi|55736519|gb|AAV60161.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
          Length = 667

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 47/120 (39%), Gaps = 11/120 (9%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A   I  DVL R  R    +  V Y+  + +   KI +RA +   +         +
Sbjct: 19  HIGSAYTTIACDVLARYKRMMNYD--VFYLTGLDEHGQKIQQRAEEAGITPQEYVDSMAV 76

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLI-QNIILHGHAYEANNEIIFDTS 157
                   VKD  +L  ++     R T ++  +++  + + ++  G  Y       +  S
Sbjct: 77  G-------VKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEKGDIYLGEYSGWYSVS 129


>gi|15606832|ref|NP_214212.1| leucyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5]
 gi|6919984|sp|O67646|SYLB_AQUAE RecName: Full=Leucyl-tRNA synthetase subunit beta; AltName:
           Full=Leucine--tRNA ligase subunit beta; Short=LeuRS
 gi|2984068|gb|AAC07608.1| leucyl-tRNA synthetase beta subunit [Aquifex aeolicus VF5]
          Length = 289

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           E  KMSKS  N +   E +E        + A  +RL +L      +  ++T + +  A  
Sbjct: 42  ESAKMSKSKANVVDPEEAVE-------KYGADTVRLYILFAAPPEQDFEWTDEGIQGAYR 94

Query: 333 LLSKW 337
            L ++
Sbjct: 95  FLQRY 99


>gi|87118382|ref|ZP_01074281.1| methionyl-tRNA synthetase [Marinomonas sp. MED121]
 gi|86166016|gb|EAQ67282.1| methionyl-tRNA synthetase [Marinomonas sp. MED121]
          Length = 685

 Score = 36.8 bits (84), Expect = 7.7,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 9/78 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+I  H     A   CA     TA    H G++ ++G+KMSKS G FI     L 
Sbjct: 291 HFIGKDIINFHALFWPAMLECAGYRTPTAVN-AH-GYVTVDGKKMSKSRGTFIKARTYLN 348

Query: 294 TKKFGGRSWPAPVIRLAM 311
                        +R   
Sbjct: 349 -------HLDPQYLRYYF 359


>gi|307610691|emb|CBX00298.1| hypothetical protein LPW_20241 [Legionella pneumophila 130b]
          Length = 519

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 36/83 (43%), Gaps = 6/83 (7%)

Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
            V  I   G+D   P   + I  S    + +   + ++ N F  L+G K S S  + I +
Sbjct: 275 DVITISSFGIDNSIPFLSSSIGISSACPQYKPF-DYYLVNYFYYLDGNKFSTSRQHMIGV 333

Query: 289 NELLETKKFGGRSWPAPVIRLAM 311
            +++  K+       + ++RL +
Sbjct: 334 EDIITCKEL-----SSDLVRLFL 351


>gi|255016634|ref|ZP_05288760.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
          Length = 185

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 43/121 (35%), Gaps = 11/121 (9%)

Query: 39  AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
           AHIG+A   +  D + R  R    +  V Y+    +   KI  +A++         +   
Sbjct: 21  AHIGHAYTTVAGDAMARYKRLKGYD--VFYLTGTDEHGQKIQAKAKER------GISEQE 72

Query: 99  ITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
              +  + F +   +L     T   R T   H   +  + + ++  G  Y    E  +  
Sbjct: 73  YVDEIAEGFQELWKKLEISN-TDFIRTTQDRHKTSVEKIFKQLLEQGDIYLGEYEGWYSV 131

Query: 157 S 157
           S
Sbjct: 132 S 132


>gi|167748022|ref|ZP_02420149.1| hypothetical protein ANACAC_02760 [Anaerostipes caccae DSM 14662]
 gi|317472496|ref|ZP_07931817.1| glutaminyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
 gi|167652540|gb|EDR96669.1| hypothetical protein ANACAC_02760 [Anaerostipes caccae DSM 14662]
 gi|316900010|gb|EFV22003.1| glutaminyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
          Length = 552

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 26/117 (22%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+ ++   + Y L + Y G+    +       DD    + + E+     
Sbjct: 32  PEPNGYLHIGHAKSIL---LNYGLAKEYGGDFHFRF-------DDTNPTKEKTEYVDSIK 81

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
            D   +    +   +                 A+N+  +M    + +I  G AY  +
Sbjct: 82  EDVEWLGADYDQTIYF----------------ASNYFDRMYECAEFLIKKGKAYVCD 122


>gi|29840370|ref|NP_829476.1| leucyl-tRNA synthetase [Chlamydophila caviae GPIC]
 gi|33301688|sp|Q822R7|SYL_CHLCV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|29834719|gb|AAP05354.1| leucyl-tRNA synthetase [Chlamydophila caviae GPIC]
          Length = 820

 Score = 36.8 bits (84), Expect = 7.8,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 44/149 (29%), Gaps = 21/149 (14%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           H+G+       D++ R  R       V +            + A      +         
Sbjct: 48  HVGHLIGYTATDIVARYKRAKGY--AVLHPMGWDSFGLPAEQYA------VRTGTHPRET 99

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN----IILHGHAYEANNEIIFD 155
           T KN + F K  + +       +  AT   P      Q     +   G AY A+      
Sbjct: 100 TQKNIENFRKQLSAMGFSYDEGREFAT-SDPDYYRWTQKLFLFLYEKGLAYMAD----MA 154

Query: 156 TSSIPNYGS-FSRRKIDEQKMGTRVPEKY 183
            +  P  G+  S    +E + G  V   Y
Sbjct: 155 VNYCPELGTVLSN---EEVENGLSVEGGY 180


>gi|85713011|ref|ZP_01044049.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
 gi|85693180|gb|EAQ31140.1| leucyl-tRNA synthetase [Idiomarina baltica OS145]
          Length = 859

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 36/132 (27%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    ++E        + A  +RL M+        ++++   +  A+ 
Sbjct: 616 GMSKMSKSKNNGIDPQTMVER-------YGADTVRLFMMFAAPPEMTLEWSDSGVEGAQR 668

Query: 333 LLSKW----PQTSTSKGIIDPAV----------------LSALYND------LNTVSAIQ 366
            L +          + G     V                ++ + +D       NT  AI 
Sbjct: 669 FLRRVWKLTYDFIEAGGYHQNDVELNKDQKALRRELHKTIAKVSDDMGRRQHFNT--AIA 726

Query: 367 ALHKLARESTKN 378
           A+ +L     K 
Sbjct: 727 AIMELLNHLQKA 738


>gi|305681597|ref|ZP_07404403.1| leucine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
 gi|305658757|gb|EFM48258.1| leucine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
          Length = 965

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 19/118 (16%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAML 312
            A+  E+    +     +  E  KM KS  N ++ +E+ +        + A  +R   M 
Sbjct: 711 AAEVEERDGKFYYQGEEVTQEYGKMGKSLKNSVSPDEICDD-------YGADTLRVYEMA 763

Query: 313 MTHYREPID----FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-LYNDLNTVSAI 365
           M     P+D    +  + +  A+  L +  +    +   D  V  A L +D  T  A+
Sbjct: 764 MG----PLDTSRPWATKDVVGAQRFLQRLWRLVVDEETGDVTVSDAELDDD--TAKAL 815


>gi|144900375|emb|CAM77239.1| Leucyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 858

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 14/84 (16%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAE 331
            KMSKS  N +    ++ T       + A   RL ML      P    +++T   +  A 
Sbjct: 618 EKMSKSKRNVVDPAHIIAT-------YGADTARLFMLS---DSPPERDLEWTEAGIDGAW 667

Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL 355
             +++  + +       PA+ +A+
Sbjct: 668 RYVNRLWRLTALAVDSLPAIGTAM 691


>gi|15889025|ref|NP_354706.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
 gi|81493741|sp|Q8UEN6|SYV_AGRT5 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|15156816|gb|AAK87491.1| valyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
          Length = 947

 Score = 36.8 bits (84), Expect = 7.9,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
             + +E  + ++IH    +  G+KMSKS GN I   EL++        + A  +R  +
Sbjct: 568 AGNPVEPFSTVYIHALVRDKNGQKMSKSKGNVIDPLELID-------EYGADALRFTL 618


>gi|307069607|ref|YP_003878084.1| isoleucyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
 gi|306482867|gb|ADM89738.1| isoleucyl-tRNA synthetase [Candidatus Zinderia insecticola CARI]
          Length = 929

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 30/74 (40%), Gaps = 7/74 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +      N+  H   ++   +KMSKS GN IT N ++         +   + RL +
Sbjct: 581 SIAYNNSIPYKNLITHGFVIDKNKKKMSKSIGNTITPNNIIN-------KYGTEIFRLWI 633

Query: 312 LMTHYREPIDFTVQ 325
               Y   I F+ +
Sbjct: 634 SSIDYNNEILFSNK 647


>gi|284030234|ref|YP_003380165.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Kribbella
           flavida DSM 17836]
 gi|283809527|gb|ADB31366.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Kribbella
           flavida DSM 17836]
          Length = 852

 Score = 36.8 bits (84), Expect = 8.0,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 61/166 (36%), Gaps = 21/166 (12%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
           +     A   I    ++ + +KMSKS GN I  +E+L+        W A + R  +    
Sbjct: 561 NGTLPWARSMISGFVVDPDRKKMSKSKGNAIVPSEILDKYGSDAVRWRAAMARPGL---- 616

Query: 316 YREPIDFTV----QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
              P D +     +RL    +  SK+     +      AV  A+         +  LHKL
Sbjct: 617 -DSPFDESQMKVGRRLAIKVLNASKFVLGFGATSADPTAVTEAVD--------LAMLHKL 667

Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
            +   +       ++ +     +EV +          +E LV+ER 
Sbjct: 668 RQVVGEATAAFERYDYTGA---LEVSERFFWTFCDDYVE-LVKERA 709


>gi|308062430|gb|ADO04318.1| valyl-tRNA synthetase [Helicobacter pylori Cuz20]
          Length = 872

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  ++  L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSIAHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|149185096|ref|ZP_01863413.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
 gi|148831207|gb|EDL49641.1| leucyl-tRNA synthetase [Erythrobacter sp. SD-21]
          Length = 837

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 51/144 (35%), Gaps = 25/144 (17%)

Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDFTVQRLTEAEI 332
           KMSKS  N +  + +++T       + A  +R  ML      P    + ++   +     
Sbjct: 613 KMSKSKKNVVDPDTIIDT-------YGADAVRWFMLS---DSPPERDLPWSEAGIEGCSR 662

Query: 333 LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI- 391
            + +  +   +          AL         ++  H+      ++ + L    A A I 
Sbjct: 663 FVHRLWRLFAAYDAGASGEDKAL---------LRKTHQTVAAVAEDIEALGFNKAVARIY 713

Query: 392 -LGIEVCKEHLNKNISIAIEKLVQ 414
            L   V K   + + S AI  LVQ
Sbjct: 714 ELTGAVEKAAPSASRSQAIRTLVQ 737


>gi|84029509|sp|Q899C3|SYI_CLOTE RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1036

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 29/83 (34%), Gaps = 6/83 (7%)

Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
           A S          N  +    L+  G KMSKS GN +   ++L++       W       
Sbjct: 563 AISTAIFDTNPFENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLDSAGADASRWH-----F 617

Query: 310 AMLMTHYREPIDFTVQRLTEAEI 332
                 +  P  F+ + + E + 
Sbjct: 618 YTASAPW-LPTRFSPEDVEETQR 639


>gi|29654984|ref|NP_820676.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|161830148|ref|YP_001597519.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331]
 gi|68566002|sp|Q83B24|SYM_COXBU RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|189083259|sp|A9NA60|SYM_COXBR RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|29542253|gb|AAO91190.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 493]
 gi|161762015|gb|ABX77657.1| methionyl-tRNA synthetase [Coxiella burnetii RSA 331]
          Length = 546

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
           H  G D+++ H     A    A        I++H G+L + G+KMSKS G FIT +  L+
Sbjct: 291 HFVGKDIVYFHALFWPAMLSGA-GFRLPTTIYVH-GYLTVNGQKMSKSRGTFITAHHYLD 348

Query: 294 TKKFGGRSWPAPVIRLA 310
                        +R  
Sbjct: 349 -------HLSPEYLRYY 358


>gi|15807552|ref|NP_296288.1| arginyl-tRNA synthetase [Deinococcus radiodurans R1]
 gi|39932240|sp|Q9RRC4|SYR_DEIRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|6460396|gb|AAF12109.1|AE002086_1 arginyl-tRNA synthetase [Deinococcus radiodurans R1]
          Length = 609

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 28/85 (32%), Gaps = 6/85 (7%)

Query: 16  TEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
             F+       + +           H+G+ R +++ D + R+LR          V+N   
Sbjct: 96  RPFELPKREGKVVIEHTSVNPNKELHVGHLRNVVLGDSMARILRAAG---HTVEVQNY-- 150

Query: 75  IDDKIIERARQEHPSIPINDAISII 99
           IDD   + A     +         +
Sbjct: 151 IDDTGRQAAESLFATQHYGRVWDGV 175


>gi|119178547|ref|XP_001240939.1| hypothetical protein CIMG_08102 [Coccidioides immitis RS]
          Length = 629

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 62/204 (30%), Gaps = 39/204 (19%)

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL----------- 292
           H  +++A+            +  H   L+  GRKMSKS GN +  +E++           
Sbjct: 212 HIAHQLAKGSKGHFKAPFKTLVTHGFTLDHAGRKMSKSIGNIVHPHEIMNGTLLPPLKIK 271

Query: 293 ----ETKKFGGRSWP---APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
                 +K     +       +RL +  + Y + +      L      L K+        
Sbjct: 272 KAKGAKEKPTAPVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLIL 331

Query: 339 ---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
              Q    K  I    L A         A+  L  L     +    L  F A   I    
Sbjct: 332 GALQDFDPKNQIPYESLRATDK-----IALSQLRSLVLACQEAFSNLEFFKAVTAI---- 382

Query: 396 VCKEHLNKNISIAIEKLVQERLIL 419
                 N + S    + +++RL  
Sbjct: 383 --NRWANADFSAFYIESIKDRLYA 404


>gi|116198903|ref|XP_001225263.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88178886|gb|EAQ86354.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 638

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/119 (14%), Positives = 38/119 (31%), Gaps = 26/119 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+  ++ D       +      +        +DD    + +QE      
Sbjct: 127 PEPSGYLHIGHAKAALLSD----YFAHQAYNGKLRL-----RLDDTNPSKEKQE------ 171

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
                          ++D   +    P      +++   +  +   +I  GHAY  + +
Sbjct: 172 ----------YQDAIIEDLALMGIK-PDSLSYTSDYFDYLYDMCIRLIKEGHAYADDTD 219


>gi|71024823|ref|XP_762641.1| hypothetical protein UM06494.1 [Ustilago maydis 521]
 gi|46100512|gb|EAK85745.1| hypothetical protein UM06494.1 [Ustilago maydis 521]
          Length = 851

 Score = 36.8 bits (84), Expect = 8.1,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 250 AQSCCADRIEKTANI---WIHNGFLNLEGRKMSKSNGNFIT-INELLETKKFGGRSWPAP 305
           A +   +  +  A       H   L+ E RKMSKS GN I+ ++ +   K     ++   
Sbjct: 481 AIATTPEGQKPIAPYKTVVTHGYVLDNESRKMSKSLGNVISPLHIIQGGKGADEPAYGID 540

Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           V+RL +  + Y          + +    L K   T+ 
Sbjct: 541 VLRLWVARSDYTADPPIGSTIVHKTAETLRKLRNTAR 577


>gi|325678885|ref|ZP_08158483.1| valine--tRNA ligase [Ruminococcus albus 8]
 gi|324109389|gb|EGC03607.1| valine--tRNA ligase [Ruminococcus albus 8]
          Length = 897

 Score = 36.8 bits (84), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 12/92 (13%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
                     + IH    + +GRKMSKS GN I    +++        + A  +R  ++ 
Sbjct: 526 AYTGKAPFDTVLIHGIVRDSQGRKMSKSLGNGIDPLVVID-------QYGADALRFMLVQ 578

Query: 314 THYREP---IDFTVQRLTEAEILLSKWPQTST 342
                P   + ++ +++       +K    S 
Sbjct: 579 GS--SPGNDMRYSEEKIVAMRNFTNKIWNASR 608


>gi|325293103|ref|YP_004278967.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
 gi|325060956|gb|ADY64647.1| valyl-tRNA synthetase [Agrobacterium sp. H13-3]
          Length = 947

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 7/58 (12%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
             + +E  + ++IH    +  G+KMSKS GN I   EL++        + A  +R  +
Sbjct: 568 AGNPVEPFSTVYIHALVRDKNGQKMSKSKGNVIDPLELID-------EYGADALRFTL 618


>gi|296446359|ref|ZP_06888304.1| isoleucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
 gi|296256132|gb|EFH03214.1| isoleucyl-tRNA synthetase [Methylosinus trichosporium OB3b]
          Length = 1037

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 7/89 (7%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   L+  G KMSKS GN +   +++           A ++RL +
Sbjct: 681 SCGTRGRAPYDIVLTHGFTLDEHGHKMSKSKGNVVAPQKVIADAG-------ADILRLWV 733

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT 340
               Y +      + L        K   T
Sbjct: 734 ASVDYSDDQRIGPEILKSVTDNYRKLRNT 762


>gi|317129810|ref|YP_004096092.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
 gi|315474758|gb|ADU31361.1| valyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
          Length = 880

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 7/80 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+I+      I Q           ++ IH    + EGRKMSKS GN +   ++
Sbjct: 480 DVLVTGYDIIYFWVARMIFQGLHFTNERPFKDVLIHGLVRDAEGRKMSKSLGNGVDPMDV 539

Query: 292 LETKKFGGRSWPAPVIRLAM 311
           ++        + A  +R  +
Sbjct: 540 ID-------KYGADALRFFL 552


>gi|50954431|ref|YP_061719.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
 gi|71657984|sp|Q6AG81|SYR_LEIXX RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|50950913|gb|AAT88614.1| arginyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
          Length = 562

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 61/327 (18%), Positives = 105/327 (32%), Gaps = 69/327 (21%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           PT     H+G AR   V D L R+L+    +    Y  N  D   +I   AR    +   
Sbjct: 138 PT--GPIHLGGARWAAVGDSLARILQAEGADVTREYYFN--DHGSQIDRFARSLLAAHRG 193

Query: 93  NDAI---------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
                          I +K    +  D   L+      +   +     M    Q I    
Sbjct: 194 EATPEDGYGGGYIGEIAAKVAAGYDGDLAALS-RDDQQEVFRSAGTALMF---QEIKDRL 249

Query: 144 HAYEANNEIIFDTSSIPNYGSFSR--RKIDE-----QKMGTRVPEKYHKKNPADFILWKR 196
           H++  + ++ F   S+   G+  R  R++DE     ++ G          +  D ++ + 
Sbjct: 250 HSFGVDFDVYFHEDSLHASGAVERAIRRLDELGHIFEEDGAVWLRTTAFGDDRDRVIVRS 309

Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD----------IHGGGLDLIFPHHE 246
           +   EP + S                    LG   D          I  G     +    
Sbjct: 310 N--GEPAYISGD------------------LGYYLDKRERGFEQNIIMLGADHHGYI--G 347

Query: 247 NEIAQSCCADRIEKTANIWIHNG-FLNL--EGR--KMSKSNGNFITINELLETKKFGGRS 301
             +A    A       N+ I  G  +NL  +G   KMSK  G  +T+++L++        
Sbjct: 348 RLMAMVE-AFGDIPNVNLQILIGQMVNLVRDGEPVKMSKRAGTIVTLDDLVDAVGV---- 402

Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLT 328
                 R A++ +     +D  +  L 
Sbjct: 403 ---DAARYALVRSSTDSQLDVDLDLLA 426


>gi|1814011|emb|CAA71837.1| valyl-tRNA synthetase [Thermus thermophilus]
          Length = 854

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 22/94 (23%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  + +H   L+ +G+KMSKS GN I   E++E        + A  +R A++   Y
Sbjct: 500 GERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVER-------YGADALRFALI---Y 549

Query: 317 --------REPIDFTVQRLTEAEILLSKWPQTST 342
                   R  + +    L  A    +K    + 
Sbjct: 550 LATGGQDIRLDLRW----LEMARNFANKLYNAAR 579


>gi|87311335|ref|ZP_01093456.1| putative leucyl-tRNA synthetase [Blastopirellula marina DSM 3645]
 gi|87285915|gb|EAQ77828.1| putative leucyl-tRNA synthetase [Blastopirellula marina DSM 3645]
          Length = 945

 Score = 36.8 bits (84), Expect = 8.3,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 32/106 (30%), Gaps = 12/106 (11%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
           +   F     PS  +MYV     Y   D  H+G+       D++ R  R     K V + 
Sbjct: 19  EKRTFATPEMPSGEKMYVLDMFPYPSGDGLHVGHPEGYTATDIVCRYARMQG--KSVLHP 76

Query: 70  RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
                      E A      I       + T KN   F +    L 
Sbjct: 77  MGFDAFGLPAEEHA------IKTGTPPRVQTEKNIANFTRQLKMLG 116


>gi|110632786|ref|YP_672994.1| isoleucyl-tRNA synthetase [Mesorhizobium sp. BNC1]
 gi|110283770|gb|ABG61829.1| Isoleucyl-tRNA synthetase [Chelativorans sp. BNC1]
          Length = 985

 Score = 36.8 bits (84), Expect = 8.4,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 14/99 (14%)

Query: 232 DIHGGGLD-LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
           D++  G D      H + I +SC          +  H   ++ EGRKMSKS GN +   +
Sbjct: 598 DVYLEGSDQHRGWFHSSLI-ESCGTRGRAPYDTVVTHGFTMDEEGRKMSKSLGNVVVPQD 656

Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
           ++           A ++RL ++ T Y     +  QRL +
Sbjct: 657 VMAKSG-------ADILRLWVMTTDY-----WEDQRLGQ 683


>gi|302336214|ref|YP_003801421.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
 gi|301320054|gb|ADK68541.1| methionyl-tRNA synthetase [Olsenella uli DSM 7084]
          Length = 534

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 23/130 (17%)

Query: 35  VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
           V    H+G A   ++ DV  R  R    +  V ++  + +  +K+ E AR          
Sbjct: 15  VNARPHLGTAYTTVLCDVQARYRRATGLD--VRFLTGMDEHGEKVEEAARSHGMDPQEWC 72

Query: 95  AISIITSKNTQQFVKDT-TRLACLAPTH-------QPRATNHIPQMIYLIQNIILHGHAY 146
                       F +D    L              Q RA  ++ +       +   G+ Y
Sbjct: 73  DSQAP-------FFEDLWQTLEISNDDFIRTTEARQTRAVQYLWE------RMRESGYLY 119

Query: 147 EANNEIIFDT 156
           +   +  +  
Sbjct: 120 KGTYDGWYCV 129


>gi|167588272|ref|ZP_02380660.1| valyl-tRNA synthetase [Burkholderia ubonensis Bu]
          Length = 415

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 67/199 (33%), Gaps = 22/199 (11%)

Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
             ++ + P   + WG        EC            D+   G D+I     + +A+S  
Sbjct: 78  WATSSLTPQIAAAWGEP-----DEC---CERVF--PMDLRPQGHDIIRTWLFSTVARSHL 127

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                   +  +    L+ + +KMSKS GN +T   LL+     G       +R    + 
Sbjct: 128 ESACLPWTHAMLSGWILDPDRKKMSKSKGNVVTPAALLDAHGSDG-------VRYWAALG 180

Query: 315 HYREPID--FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
             R  +D  F   ++     L  K    S        A  + L   L+    I  L ++ 
Sbjct: 181 --RPGMDTAFDETQMRNGRRLALKLLNVSKLALGFAQAPAAPLCEALDRAM-IARLAQVV 237

Query: 373 RESTKNHDLLPIFNASAHI 391
             +T   D L    A  HI
Sbjct: 238 TLATMAFDALDYSKAIEHI 256


>gi|75674290|ref|YP_316711.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
 gi|123773340|sp|Q3SWI2|SYL_NITWN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|74419160|gb|ABA03359.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
          Length = 883

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 23/83 (27%), Gaps = 8/83 (9%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P      HIG+ R   + DV+ R +R       V +              A      I  
Sbjct: 43  PYPSGRIHIGHVRNYTLGDVIARYMRARGYN--VLHPMGWDAFGLPAENAA------IER 94

Query: 93  NDAISIITSKNTQQFVKDTTRLA 115
             A    T  N +   K    + 
Sbjct: 95  KIAPKAWTYDNIKAMKKQLRSIG 117


>gi|317402233|gb|EFV82821.1| glutaminyl-tRNA synthetase [Achromobacter xylosoxidans C54]
          Length = 588

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 22/119 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + HIG+A+ +    V + L R + G   + +     + +D+    A  E      
Sbjct: 59  PEPNGYLHIGHAKSIC---VNFGLARDFGGVCHLRFDDTNPEKEDQEYVDAIIEAVHWLG 115

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
            D            +                 A+++   M    + ++  GHAY     
Sbjct: 116 FDWK---ADGRDNLYF----------------ASDYFGYMYEFAEALVEAGHAYVDEQS 155


>gi|226947322|ref|YP_002802413.1| isoleucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
 gi|226841621|gb|ACO84287.1| isoleucine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
          Length = 1038

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 6/84 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEI 332
                  +  P  F+ + + E + 
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQR 639


>gi|225453207|ref|XP_002275733.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 475

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  + +++H    + +GRKMSK+ GN I   + +       + +    +R  + + 
Sbjct: 81  FTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTI-------KEFGTDALRFTLALG 133

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              + ++ + +RLT  +   +K    
Sbjct: 134 TAGQDLNLSTERLTSNKAFTNKLWNA 159


>gi|169334634|ref|ZP_02861827.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259351|gb|EDS73317.1| hypothetical protein ANASTE_01037 [Anaerofustis stercorihominis DSM
           17244]
          Length = 882

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +             +++IH    + +GRKMSKS GN I   E+
Sbjct: 483 DVLVTGFDIIFFWVARMVFSGIEQMGEPPFHHVYIHGLVRDSQGRKMSKSLGNGIDPLEV 542

Query: 292 LETKKFGGRSWPAPVIRLAMLMT 314
           ++        + A V+R +++  
Sbjct: 543 ID-------KYGADVLRFSLVTG 558


>gi|147856553|emb|CAN82480.1| hypothetical protein VITISV_012746 [Vitis vinifera]
          Length = 380

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 36/86 (41%), Gaps = 7/86 (8%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
                  + +++H    + +GRKMSK+ GN I   + +       + +    +R  + + 
Sbjct: 8   FTGAVPFSYVYLHGLIRDSQGRKMSKTLGNVIDPIDTI-------KEFGTDALRFTLALG 60

Query: 315 HYREPIDFTVQRLTEAEILLSKWPQT 340
              + ++ + +RLT  +   +K    
Sbjct: 61  TAGQDLNLSTERLTSNKAFTNKLWNA 86


>gi|55981138|ref|YP_144435.1| valyl-tRNA synthetase [Thermus thermophilus HB8]
 gi|14286172|sp|P96142|SYV_THETH RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|66773799|sp|Q5SJ45|SYV_THET8 RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|12084715|pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|12084716|pdb|1GAX|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|28948386|pdb|1IVS|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|28948387|pdb|1IVS|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
           Synthetase Complexed With Trna(Val) And Valyl-Adenylate
           Analogue
 gi|33357071|pdb|1IYW|A Chain A, Preliminary Structure Of Thermus Thermophilus Ligand-Free
           Valyl-Trna Synthetase
 gi|33357072|pdb|1IYW|B Chain B, Preliminary Structure Of Thermus Thermophilus Ligand-Free
           Valyl-Trna Synthetase
 gi|18844753|dbj|BAB85225.1| valyl-tRNA synthetase [Thermus thermophilus]
 gi|55772551|dbj|BAD70992.1| valyl-tRNA synthetase (valine--tRNA ligase) (ValRS) [Thermus
           thermophilus HB8]
          Length = 862

 Score = 36.8 bits (84), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 36/94 (38%), Gaps = 22/94 (23%)

Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
                  + +H   L+ +G+KMSKS GN I   E++E        + A  +R A++   Y
Sbjct: 508 GERPFKTVLLHGLVLDEKGQKMSKSKGNVIDPLEMVER-------YGADALRFALI---Y 557

Query: 317 --------REPIDFTVQRLTEAEILLSKWPQTST 342
                   R  + +    L  A    +K    + 
Sbjct: 558 LATGGQDIRLDLRW----LEMARNFANKLYNAAR 587


>gi|322371471|ref|ZP_08046020.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
 gi|320549003|gb|EFW90668.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
          Length = 948

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 37/117 (31%), Gaps = 12/117 (10%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
             D      DL+  H    +                   G   LEG KMS S G+ +   
Sbjct: 575 PVDYRCSANDLVSNHLTFFLFHHAELFDPANWPQGITVMGMGLLEGEKMSSSKGHVVLPE 634

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSKWPQTSTS 343
             +E        + A  +R  ++ +   EP    D+  +++      L ++   +  
Sbjct: 635 NAIE-------KYGADTVRFFLMNSA--EPWQDYDWRSEQVESTGNQLRRFWNRANE 682



 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 26/93 (27%), Gaps = 17/93 (18%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCV---TYVRNITDIDDKIIERARQEHPSIPINDAI 96
           HIG+AR   V DV  R  R            +V     +      + R+      + D  
Sbjct: 2   HIGHARTYTVPDVWARYRRLQGDNVLFPIAWHVTGTPIVGAVERLKKREPEQMSVLQDTY 61

Query: 97  SI-------------ITSKNTQQ-FVKDTTRLA 115
           ++                   +  + K+   L 
Sbjct: 62  NVSDEDLSEMETPMGFARHFIEDSYKKNMQSLG 94


>gi|308183256|ref|YP_003927383.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
 gi|308065441|gb|ADO07333.1| valyl-tRNA synthetase [Helicobacter pylori PeCan4]
          Length = 872

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K    ++   +   +   
Sbjct: 559 ANLCATG---RDIKLSTAHLENNKNFANKLFNAASYLKLKQESFKD 601


>gi|302851887|ref|XP_002957466.1| hypothetical protein VOLCADRAFT_107675 [Volvox carteri f.
           nagariensis]
 gi|300257270|gb|EFJ41521.1| hypothetical protein VOLCADRAFT_107675 [Volvox carteri f.
           nagariensis]
          Length = 834

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM- 313
                  + I++H    + +GRKMSKS GN +   + +         +    +R  +   
Sbjct: 474 FTGQPPFSTIYLHGLVRDEKGRKMSKSLGNVVDPLDTIA-------QYGTDALRFTLATG 526

Query: 314 THYREPIDFTVQRLTEAEILLSKWPQT 340
           T   + ++ +++R+T +    +K    
Sbjct: 527 TTVGQDLNLSLERVTASRNFTNKLWNA 553


>gi|253751328|ref|YP_003024469.1| isoleucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|253753229|ref|YP_003026369.1| isoleucyl-tRNA synthetase [Streptococcus suis P1/7]
 gi|253755052|ref|YP_003028192.1| isoleucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251815617|emb|CAZ51203.1| isoleucyl-tRNA synthetase [Streptococcus suis SC84]
 gi|251817516|emb|CAZ55260.1| isoleucyl-tRNA synthetase [Streptococcus suis BM407]
 gi|251819474|emb|CAR44998.1| isoleucyl-tRNA synthetase [Streptococcus suis P1/7]
          Length = 929

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+  G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGNGMKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--- 367
                   +  ++  L +      K   T           L A  +D N    A+     
Sbjct: 623 TSVDTSNDVRVSMDILGQVSETYRKIRNTLR--------FLIANTSDFNPASDAVAYEEL 674

Query: 368 ----------LHKLA---RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                      +KL    RE+  N+D + I+ +  + + +++   +L+
Sbjct: 675 RSVDQYLLVKFNKLVVQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLD 722


>gi|222153411|ref|YP_002562588.1| isoleucyl-tRNA synthetase [Streptococcus uberis 0140J]
 gi|222114224|emb|CAR42801.1| isoleucyl-tRNA synthetase [Streptococcus uberis 0140J]
          Length = 931

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 15/109 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       +      L+ +G KMSKS GN I+ N++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAVLSQGFVLDGKGEKMSKSKGNIISPNDV-------AKQYGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
                   +  ++  L +      K   T           L A  +D N
Sbjct: 623 TSVDTDNDVRVSMDILGQVSETYRKIRNTLR--------FLIANTSDFN 663


>gi|170755878|ref|YP_001779813.1| leucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
 gi|169121090|gb|ACA44926.1| leucyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
          Length = 813

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEFGADVFRMYLMFGFDYTEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQTSTSK 344
             +      + +  +   + 
Sbjct: 614 DAIKSIGKFVDRVERILENA 633


>gi|182420116|ref|ZP_02951350.1| isoleucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237669492|ref|ZP_04529472.1| isoleucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376153|gb|EDT73740.1| isoleucyl-tRNA synthetase [Clostridium butyricum 5521]
 gi|237654936|gb|EEP52496.1| isoleucine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 1037

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 52/155 (33%), Gaps = 22/155 (14%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S C        N  +    L+ +G KMSKS GN +   E+L ++      W      
Sbjct: 563 MAISTCLFDTNPFENCIVLGHVLDKKGLKMSKSKGNVVDPFEVLGSQGADATRWH----- 617

Query: 309 LAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
                  +  P  F+ + + E +         +  +          DP   +    D  +
Sbjct: 618 FYTASAPW-LPTRFSTEDVAETQRKFLGTLWNVYSFYVLYADIDKFDPTKYA----DFVS 672

Query: 362 VSAI-----QALHKLARESTKNHDLLPIFNASAHI 391
            + +       L+ L +   +N D   I  A+  I
Sbjct: 673 DNVMDKWITSKLNTLIKIVEENLDGYKITQAALAI 707


>gi|168177431|ref|ZP_02612095.1| isoleucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
 gi|182670581|gb|EDT82555.1| isoleucyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
          Length = 1038

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 6/84 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEI 332
                  +  P  F+ + + E + 
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQR 639


>gi|83593131|ref|YP_426883.1| valyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
 gi|83576045|gb|ABC22596.1| Valyl-tRNA synthetase, class Ia [Rhodospirillum rubrum ATCC 11170]
          Length = 879

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 41/100 (41%), Gaps = 10/100 (10%)

Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
           GW  +   ++ +Y G   D+   G D+IF      +             +++IH    + 
Sbjct: 468 GWPDQTPELARYYPG---DVLVTGFDIIFFWVARMMMMGHYVMGDVPFRDVYIHALVRDE 524

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
           +G+KMSKS GN I   ++ +        +    +R  ++ 
Sbjct: 525 KGQKMSKSKGNVIDPLDMTD-------QYGTDALRFTLIA 557


>gi|78044410|ref|YP_359197.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
 gi|90103530|sp|Q3AF87|SYV_CARHZ RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
           ligase; Short=ValRS
 gi|77996525|gb|ABB15424.1| valyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
          Length = 878

 Score = 36.8 bits (84), Expect = 8.6,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 12/86 (13%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
               + IH   L+ +GRKMSKS GN +   E++ +         A  +R  ++  +   P
Sbjct: 507 PFKEVLIHGLVLDAQGRKMSKSLGNGVDPVEVIASHG-------ADSLRFMLVTGN--TP 557

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST 342
              + F  +RL  A    +K    S 
Sbjct: 558 GNDLRFHFERLDGARNFANKLWNASR 583


>gi|326626975|gb|EGE33318.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 9]
          Length = 891

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 51  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 102

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 103 NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 147


>gi|319757613|gb|ADV69555.1| isoleucyl-tRNA synthetase [Streptococcus suis JS14]
          Length = 929

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+  G KMSKS GN I  +++        + + A ++RL +
Sbjct: 570 SVAVNGHAPYKAILSQGFVLDGNGMKMSKSLGNTILPSDV-------EKQFGAEILRLWV 622

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--- 367
                   +  ++  L +      K   T           L A  +D N    A+     
Sbjct: 623 TSVDTSNDVRVSMDILGQVSETYRKIRNTLR--------FLIANTSDFNPASDAVAYEEL 674

Query: 368 ----------LHKLA---RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                      +KL    RE+  N+D + I+ +  + + +++   +L+
Sbjct: 675 RSVDQYLLVKFNKLVVQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLD 722


>gi|261838479|gb|ACX98245.1| valyl-tRNA synthetase [Helicobacter pylori 51]
          Length = 872

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSTAHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|153932381|ref|YP_001382506.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|153934659|ref|YP_001386058.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. Hall]
 gi|152928425|gb|ABS33925.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
 gi|152930573|gb|ABS36072.1| isoleucine--tRNA ligase [Clostridium botulinum A str. Hall]
          Length = 1038

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 6/84 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 562 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 616

Query: 309 LAMLMTHYREPIDFTVQRLTEAEI 332
                  +  P  F+ + + E + 
Sbjct: 617 FYTASAPW-LPTRFSEEDVKETQR 639


>gi|148378106|ref|YP_001252647.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
 gi|148287590|emb|CAL81655.1| isoleucyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
          Length = 1040

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 6/84 (7%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           +A S          N  +    L+  G KMSKS GN +   ++LE +      W      
Sbjct: 564 LAISTALFGKSSYENCIVLGHVLDKHGLKMSKSKGNVVDPFDVLENEGADATRWH----- 618

Query: 309 LAMLMTHYREPIDFTVQRLTEAEI 332
                  +  P  F+ + + E + 
Sbjct: 619 FYTASAPW-LPTRFSEEDVKETQR 641


>gi|148927961|ref|ZP_01811363.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
 gi|147886691|gb|EDK72259.1| valyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
          Length = 753

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 20/124 (16%)

Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVF------DIHGGGLDLIFPHHENEIA 250
              E  +++ +  G+  W      +++ YL G         D+   G DL+       I 
Sbjct: 519 KREEDTFDTWFSSGQ--W----PFITTDYLEGGELSKFYPTDMMETGHDLLDRWVARMIM 572

Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
                       N+++H   L+  G+KMSKS GN I   +++         + +   RL 
Sbjct: 573 LGLYMTDKVPFKNVYMHGMVLDEHGQKMSKSKGNVINPMDIIN-------KYGSDAFRLG 625

Query: 311 MLMT 314
           ++ +
Sbjct: 626 IIAS 629


>gi|146318143|ref|YP_001197855.1| isoleucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|146320330|ref|YP_001200041.1| isoleucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|145688949|gb|ABP89455.1| Isoleucyl-tRNA synthetase [Streptococcus suis 05ZYH33]
 gi|145691136|gb|ABP91641.1| Isoleucyl-tRNA synthetase [Streptococcus suis 98HAH33]
 gi|292557901|gb|ADE30902.1| Isoleucyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
          Length = 930

 Score = 36.8 bits (84), Expect = 8.7,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 32/168 (19%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S   +       I      L+  G KMSKS GN I  +++        + + A ++RL +
Sbjct: 571 SVAVNGHAPYKAILSQGFVLDGNGMKMSKSLGNTILPSDV-------EKQFGAEILRLWV 623

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA--- 367
                   +  ++  L +      K   T           L A  +D N    A+     
Sbjct: 624 TSVDTSNDVRVSMDILGQVSETYRKIRNTLR--------FLIANTSDFNPASDAVAYEEL 675

Query: 368 ----------LHKLA---RESTKNHDLLPIFNASAHILGIEVCKEHLN 402
                      +KL    RE+  N+D + I+ +  + + +++   +L+
Sbjct: 676 RSVDQYLLVKFNKLVVQIREAYDNYDFMGIYKSVVNFVTLDLSAFYLD 723


>gi|317178546|dbj|BAJ56334.1| valyl-tRNA synthetase [Helicobacter pylori F30]
          Length = 872

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSTAHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|78190853|gb|ABB29748.1| ClpC [Bifidobacterium angulatum DSM 20098]
          Length = 186

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 9/91 (9%)

Query: 361 TVSAIQALHKLA-------RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           T SAIQA  +L+       R   K  DL+    A   I  + +  E   K +   + KL 
Sbjct: 20  TDSAIQAAAELSSRYIQDRRLPDKAIDLIDEAGARLRIKRLTMPPEL--KELEAKVAKLS 77

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILED 444
            E+   +K + F  A  +R  LE     L+D
Sbjct: 78  AEKEQAVKDQDFEKAADMRDDLEKLQTELKD 108


>gi|62179248|ref|YP_215665.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62126881|gb|AAX64584.1| leucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|322713713|gb|EFZ05284.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 891

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 51  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 102

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 103 NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 147


>gi|317177901|dbj|BAJ55690.1| valyl-tRNA synthetase [Helicobacter pylori F16]
          Length = 872

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSTAHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|298488744|ref|ZP_07006773.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
 gi|298156817|gb|EFH97908.1| Methionyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
           NCPPB 3335]
          Length = 682

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 52/175 (29%), Gaps = 43/175 (24%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L          P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYL-------HHLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
                   K  +      +     +  + +DL        + K+   +++    +   NA
Sbjct: 361 --------KLGRGVDDLDLNLEDFVQKVNSDL--------IGKVVNIASRCAGFIHKGNA 404

Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKK-FSSADYIRKQLESK 438
              ++G       L      A   I    + R     M++  + AD     +  K
Sbjct: 405 --GVMGEANAAPELTDAFLAAAPSIADAYEARDFARAMRETMALADRANAYIAEK 457


>gi|253578270|ref|ZP_04855542.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850588|gb|EES78546.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 588

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 6/54 (11%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN 161
            ++  +L   +     + ++  P +  +++ +   G AY     ++ D     +
Sbjct: 254 KRNYDKLNV-SFDLWKKESDAQPYIPGMVEEMKEKGFAYVDQGALVVDVKEEND 306


>gi|163791030|ref|ZP_02185451.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
 gi|159873675|gb|EDP67758.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
          Length = 675

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 40/125 (32%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIGNA   I  DV+ R  R    +        +T  D+      + E+ +  +N      
Sbjct: 21  HIGNAYSTIACDVMARYKRMQDFDVFY-----LTGSDEH---GQKIENKAQELNITPQEY 72

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ-MIYLI-QNIILHGHAYEANNEIIFDTS 157
             +  +        L         R T+ I + ++  I +  +  G  Y    E  +   
Sbjct: 73  VDEMAKGMQNLWELLEISN-DKFIRTTDPIHEKVVADIFERFLAQGDIYLDEYEGWYSVP 131

Query: 158 SIPNY 162
               Y
Sbjct: 132 DETFY 136


>gi|153937977|ref|YP_001389549.1| leucyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
 gi|166231599|sp|A7G9T9|SYL_CLOBL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|152933873|gb|ABS39371.1| leucine--tRNA ligase [Clostridium botulinum F str. Langeland]
 gi|295317646|gb|ADF98023.1| leucine--tRNA ligase [Clostridium botulinum F str. 230613]
          Length = 813

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEFGADVFRMYLMFGFDYTEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQTSTSK 344
             +      + +  +   + 
Sbjct: 614 DAIKSIGKFVDRVERILENA 633


>gi|222056007|ref|YP_002538369.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32]
 gi|254782965|sp|B9M2S2|SYR_GEOSF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
           ligase; Short=ArgRS
 gi|221565296|gb|ACM21268.1| arginyl-tRNA synthetase [Geobacter sp. FRC-32]
          Length = 561

 Score = 36.8 bits (84), Expect = 8.8,   Method: Composition-based stats.
 Identities = 28/176 (15%), Positives = 56/176 (31%), Gaps = 50/176 (28%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLL--------RYYYGEKCVTYVRNITDI--------- 75
           PT     HIG+ R   + D + RLL        R +Y       + N+            
Sbjct: 131 PT--GPLHIGHGRGAALGDTICRLLSATGWDVTREFYYNDAGQQIANLALSVQARCFGNG 188

Query: 76  -DDK-----------IIERARQEHPSIPINDAISIITS-----------KNTQQFVK--- 109
            DD            II+ AR       ++     +T+           +    F++   
Sbjct: 189 PDDPGWPSDGYQGEYIIDVARAYMARETVHADDQHVTAAGDPQDLEAIRRFAVAFLRREQ 248

Query: 110 --DTTRLACLAPTHQPRATN-HIPQMIY-LIQNIILHGHAYEANNEIIFDTSSIPN 161
             D               ++ +    +  +++ ++  GH YE ++ +   T+S  +
Sbjct: 249 DQDLAAFDV-HFDVYSLESDLYADGSVERVVRRLVDSGHTYEQDDALWLRTTSFAD 303


>gi|114319978|ref|YP_741661.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
 gi|122312171|sp|Q0AAG6|SYM_ALHEH RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|114226372|gb|ABI56171.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 675

 Score = 36.4 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 51/147 (34%), Gaps = 21/147 (14%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM-----LMTHYREPIDF 322
           +GFL + G+KMSKS G FI     L+             +R           H    +D 
Sbjct: 319 HGFLTVNGQKMSKSRGTFIMARTWLD-------HLNPEYLRYYFAAKLSASVH---DLDL 368

Query: 323 TVQRLTEAEIL--LSKWPQ-TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE-STKN 378
           ++   T+      + K     S   G I       L   L+   A+      A E   + 
Sbjct: 369 SLDDFTQRVNADLVGKLVNIASRCAGFIHKRFEGRLGETLDDP-ALYRQFTAAGEHIAEL 427

Query: 379 HDLLPIFNASAHILGI-EVCKEHLNKN 404
           ++      A   I+ + +   +++++ 
Sbjct: 428 YEKREFSRAMREIMALADQANQYVDEQ 454


>gi|103487838|ref|YP_617399.1| isoleucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
 gi|98977915|gb|ABF54066.1| Isoleucyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
          Length = 1063

 Score = 36.4 bits (83), Expect = 8.9,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 13/74 (17%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   ++ +G KMSKS GN I+  +L+       R + A ++RL  
Sbjct: 675 SCGTRGQAPYKAVLTHGFTMDAKGLKMSKSLGNTISPIDLM-------RDYGADILRLWA 727

Query: 312 LMTHYREPIDFTVQ 325
           L       +DFT  
Sbjct: 728 LS------VDFTED 735


>gi|302678049|ref|XP_003028707.1| hypothetical protein SCHCODRAFT_78695 [Schizophyllum commune H4-8]
 gi|300102396|gb|EFI93804.1| hypothetical protein SCHCODRAFT_78695 [Schizophyllum commune H4-8]
          Length = 986

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 2/96 (2%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT-INELLETKKFGGR-SWPAPV 306
           IA S           +  H   L+  G+KMSKS GN I+ ++ +L  K      ++ A  
Sbjct: 616 IATSEDGKCAAPYKTLITHGMVLDQHGKKMSKSLGNIISPLSIVLGGKDKKAEPAYGADT 675

Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           +RL      Y   +      L++    + +   +  
Sbjct: 676 LRLWAATVEYWHDMSIGPVVLSQTAETMRRIRNSVR 711


>gi|300715833|ref|YP_003740636.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
 gi|299061669|emb|CAX58785.1| Leucyl-tRNA synthetase [Erwinia billingiae Eb661]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    +    + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKQTFKVTEEEGKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVISRYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKLLG 116


>gi|253575851|ref|ZP_04853186.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
          D14]
 gi|251844894|gb|EES72907.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
          D14]
          Length = 673

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 24 SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
          +    Y+  P  Y  D  HIG+A   +  D + R  R    +  V Y+    +   KI +
Sbjct: 3  NKPTFYITSPIYYPSDKLHIGHAYTTVAGDAMARYKRLRGFD--VRYLTGTDEHGQKIEQ 60

Query: 82 RARQEH 87
          +A+++ 
Sbjct: 61 KAKEKG 66


>gi|223986677|ref|ZP_03636667.1| hypothetical protein HOLDEFILI_03990 [Holdemania filiformis DSM
           12042]
 gi|223961363|gb|EEF65885.1| hypothetical protein HOLDEFILI_03990 [Holdemania filiformis DSM
           12042]
          Length = 410

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 9/93 (9%)

Query: 358 DLNTVSAIQALHKLARESTKNHDLLP-IFNASAHIL-------GIEVCKEHLNKNISIAI 409
           D N + A+  LH+ A E  KNH +L       + +        G+   K       +  I
Sbjct: 310 DFNFIKAVDNLHRFAIEDMKNHGVLRYDMCGFSGVTEKSDPHYGLYDYKRSFGSVYTERI 369

Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
            +    R      + +  AD  R++++ K   L
Sbjct: 370 GEFDYIRKPARTAR-WKKADRFRRRVKRKLISL 401


>gi|78777263|ref|YP_393578.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
 gi|78497803|gb|ABB44343.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
          Length = 644

 Score = 36.4 bits (83), Expect = 9.0,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 7/45 (15%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
           +G+   +G KMSKS GN I+  ++ +        +    +R  ML
Sbjct: 287 HGWWTRDGEKMSKSKGNVISPKQVADV-------YGVENLRYFML 324


>gi|322804454|emb|CBZ02004.1| leucyl-tRNA synthetase [Clostridium botulinum H04402 065]
          Length = 813

 Score = 36.4 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 34/80 (42%), Gaps = 9/80 (11%)

Query: 267 HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTV 324
           H G  L  +G KMSKS GN I+ ++ +       + + A V R+ ++    Y E   ++ 
Sbjct: 561 HQGLILGPDGLKMSKSKGNTISPDDYI-------KEFGADVFRMYLMFGFDYTEGGAWSD 613

Query: 325 QRLTEAEILLSKWPQTSTSK 344
             +      + +  +   + 
Sbjct: 614 DAIKSIGKFVDRVERILENA 633


>gi|303310449|ref|XP_003065237.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
 gi|240104897|gb|EER23092.1| isoleucyl-tRNA synthetase, putative [Coccidioides posadasii C735
           delta SOWgp]
          Length = 1012

 Score = 36.4 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 62/204 (30%), Gaps = 39/204 (19%)

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL----------- 292
           H  +++A+            +  H   L+  GRKMSKS GN +  +E++           
Sbjct: 595 HIAHQLAKGSKGHFKAPFKTLVTHGFTLDHAGRKMSKSIGNIVHPHEIMNGTLLPPLKIK 654

Query: 293 ----ETKKFGGRSWP---APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
                 +K     +       +RL +  + Y + +      L      L K+        
Sbjct: 655 KAKGAKEKPTAPVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLIL 714

Query: 339 ---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
              Q    K  I    L A         A+  L  L     +    L  F A   I    
Sbjct: 715 GALQDFDPKNQIPYESLRATDK-----IALSQLRSLVLACQEAFSNLEFFKAVTAI---- 765

Query: 396 VCKEHLNKNISIAIEKLVQERLIL 419
                 N + S    + +++RL  
Sbjct: 766 --NRWANADFSAFYIESIKDRLYA 787


>gi|84029517|sp|Q5FH91|SYI_EHRRG RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1118

 Score = 36.4 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    E+        + + +  +R  M
Sbjct: 622 STALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPMEIF-------KQYGSDAMRFLM 674

Query: 312 LMT 314
           L  
Sbjct: 675 LSH 677


>gi|15668814|ref|NP_247617.1| leucyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
 gi|3915868|sp|Q58050|SYL_METJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|2826301|gb|AAB98628.1| leucyl-tRNA synthetase (leuS) [Methanocaldococcus jannaschii DSM
           2661]
          Length = 942

 Score = 36.4 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 12/122 (9%)

Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
               DLI  H    I         E      + NG++ +EG+K+SKS G  + + E+ E 
Sbjct: 591 CSAKDLIPNHLTFYIFNHVAIFPEEFWPRGIVVNGYVTIEGKKLSKSKGPVLPVLEVAE- 649

Query: 295 KKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWP----QTSTSKGIIDP 349
                  + A V R  +       +  D   + +   + +L +      + +  +G    
Sbjct: 650 ------KFGADVGRFYITTCAELPQDADIKFKEMENTKKVLERLYLFAKEIAERRGETGE 703

Query: 350 AV 351
             
Sbjct: 704 EF 705


>gi|152967386|ref|YP_001363170.1| leucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
 gi|189030283|sp|A6WDL7|SYL_KINRD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|151361903|gb|ABS04906.1| leucyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
          Length = 855

 Score = 36.4 bits (83), Expect = 9.1,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 18/135 (13%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG+     H       +     +      E    + ++ G + ++G  MSKS G
Sbjct: 568 PVDQYVGGVTHAILHLLYARFITKVLHDLGYLPFDEPFTRL-LNQGMVQMDGSAMSKSKG 626

Query: 284 NFITINELLETKKFGGRSWPAPVIRLAM-LMTHYREPIDFTVQRLTEAEILLS---KWPQ 339
           N + +++ LE             IRL M       + ID+     + +   L    +  +
Sbjct: 627 NIVRLSDQLEEHGV-------DAIRLTMAFAGPPEDDIDWADVSPSGSAKFLGRAWRLAR 679

Query: 340 TSTSKGIIDPAVLSA 354
             TS+  +DP    A
Sbjct: 680 DVTSEPGVDPTTGDA 694


>gi|319407774|emb|CBI81421.1| Leucyl-tRNA synthetase [Bartonella sp. 1-1C]
          Length = 874

 Score = 36.4 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 21/154 (13%), Positives = 44/154 (28%), Gaps = 49/154 (31%)

Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID----FTVQRLTEAE 331
            KMSKS  N +  ++++        S+ A  +R  ML      P +    ++   +  A 
Sbjct: 631 EKMSKSKKNVVDPDDIIA-------SYGADTVRWFMLS---DSPPERDVIWSESGIEGAH 680

Query: 332 ILLSKWPQTSTSKGIIDPAVLS--------------------ALYND-----LNTVSAIQ 366
             + +  +       +   V S                    A+ +D      N   A+ 
Sbjct: 681 RFVQRVWRLVALSAPVLKEVKSCAGQQGAALELSKAAHRTLCAVEDDLEKLAFN--RAVA 738

Query: 367 ALHKLARES--------TKNHDLLPIFNASAHIL 392
            L++L                ++      +    
Sbjct: 739 RLYELLNVIASSLNNLENAEDEMKSALRQAMDFF 772


>gi|323341519|ref|ZP_08081759.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
 gi|323091057|gb|EFZ33689.1| leucine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
          Length = 804

 Score = 36.4 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 16/81 (19%)

Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA-MLMTHYREPID----FTVQ 325
           L     KMSKS GN I  ++++E        + A  +RL  M M     P++    ++  
Sbjct: 570 LGNNHEKMSKSKGNVINPDDIVE-------QYGADTLRLYEMFMG----PLEASKPWSED 618

Query: 326 RLTEAEILLSKWPQTSTSKGI 346
            L  A   +++       +  
Sbjct: 619 GLNGAYKFINRIWNLIIDEDD 639


>gi|161986610|ref|YP_196426.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1105

 Score = 36.4 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    E+        + + +  +R  M
Sbjct: 609 STALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPMEIF-------KQYGSDAMRFLM 661

Query: 312 LMT 314
           L  
Sbjct: 662 LSH 664


>gi|58416839|emb|CAI27952.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
          Length = 1125

 Score = 36.4 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    E+        + + +  +R  M
Sbjct: 629 STALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPMEIF-------KQYGSDAMRFLM 681

Query: 312 LMT 314
           L  
Sbjct: 682 LSH 684


>gi|57239215|ref|YP_180351.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|161598454|ref|YP_197385.2| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
 gi|57161294|emb|CAH58215.1| isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1104

 Score = 36.4 bits (83), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    E+        + + +  +R  M
Sbjct: 609 STALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPMEIF-------KQYGSDAMRFLM 661

Query: 312 LMT 314
           L  
Sbjct: 662 LSH 664


>gi|320033836|gb|EFW15782.1| isoleucyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
          Length = 1012

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 62/204 (30%), Gaps = 39/204 (19%)

Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL----------- 292
           H  +++A+            +  H   L+  GRKMSKS GN +  +E++           
Sbjct: 595 HIAHQLAKGSKGHFKAPFKTLVTHGFTLDHAGRKMSKSIGNIVHPHEIMNGTLLPPLKIK 654

Query: 293 ----ETKKFGGRSWP---APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
                 +K     +       +RL +  + Y + +      L      L K+        
Sbjct: 655 KAKGAKEKPTAPVYDALGPDALRLWVAGSDYTKDVVIGQPILKATNGSLHKYRVTFRLIL 714

Query: 339 ---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
              Q    K  I    L A         A+  L  L     +    L  F A   I    
Sbjct: 715 GALQDFDPKNQIPYESLRATDK-----IALSQLRSLVLACQEAFSNLEFFKAVTAI---- 765

Query: 396 VCKEHLNKNISIAIEKLVQERLIL 419
                 N + S    + +++RL  
Sbjct: 766 --NRWANADFSAFYIESIKDRLYA 787


>gi|227535231|ref|ZP_03965280.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
 gi|227187115|gb|EEI67182.1| isoleucyl-tRNA synthetase (isoleucine--tRNA ligase) [Lactobacillus
           paracasei subsp. paracasei ATCC 25302]
          Length = 948

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 13/136 (9%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S  A  +     I      L+ +GRKMSKS GN I    +        + + A +IRL +
Sbjct: 588 SVAATGVAPYRGILSQGFTLDGKGRKMSKSLGNTIVPATI-------EKQFGAEIIRLWV 640

Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLNTVS--AI 365
                   +  +V    +      K   T      + G  DP   +  Y++L +V    +
Sbjct: 641 ATVDSSSDVRVSVDNFAQTSEAYRKIRNTMRFMVANTGDFDPEKDTVAYDELGSVDRYMM 700

Query: 366 QALHKLARESTKNHDL 381
             L+++ ++    +D+
Sbjct: 701 VRLNQIIKQIKTAYDV 716


>gi|239917504|ref|YP_002957062.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|281414006|ref|ZP_06245748.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
 gi|239838711|gb|ACS30508.1| valyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
          Length = 894

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 32/194 (16%), Positives = 68/194 (35%), Gaps = 18/194 (9%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
            FD+   G D+I     + + ++   +      +  +    L+ + +KMSKS GN +   
Sbjct: 557 PFDLRPQGHDIIRTWLFSTVVRAHALNGSVPWTDTALSGWILDPDRKKMSKSKGNVVVPT 616

Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGI 346
           ++L+        + +  +R             + V ++     L  K    +    + G 
Sbjct: 617 DILD-------QFGSDAVRYWAASARLGADTAYEVAQMKIGRRLAIKLLNAAKFVLNLGA 669

Query: 347 IDPAVLSALYNDLNTVSAIQALHK---LARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
              AV+    +     +A+        LAR +         F A  +   + V ++    
Sbjct: 670 TQDAVIRTADD----AAAVTNPLDASLLARLAATVEQATRAFEAYDYARALNVTEQFFWA 725

Query: 404 NISIAIEKLVQERL 417
                +E LV++R 
Sbjct: 726 FTDDYVE-LVKDRA 738


>gi|78190859|gb|ABB29751.1| ClpC [Bifidobacterium merycicum]
          Length = 178

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 9/94 (9%)

Query: 361 TVSAIQALHKLA-------RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
           T SAIQA  +L+       R   K  DL+    A   I  +    E   K +   + K+ 
Sbjct: 20  TDSAIQAAAELSSRYIQDRRLPDKAIDLIDEAGARLRIKRLTTPPEL--KELEAKVAKVS 77

Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
            E+   +K + F  A  +R  LES    L+D + 
Sbjct: 78  AEKEQAVKDQDFEKAAAMRDDLESLQNELKDKET 111


>gi|84029518|sp|Q5HB43|SYI_EHRRW RecName: Full=Isoleucyl-tRNA synthetase; AltName:
           Full=Isoleucine--tRNA ligase; Short=IleRS
          Length = 1117

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    E+        + + +  +R  M
Sbjct: 622 STALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPMEIF-------KQYGSDAMRFLM 674

Query: 312 LMT 314
           L  
Sbjct: 675 LSH 677


>gi|58417799|emb|CAI27003.1| Isoleucyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
          Length = 1124

 Score = 36.4 bits (83), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 7/63 (11%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           S          N   H   L+ +G+K+SK   N+    E+        + + +  +R  M
Sbjct: 629 STALFDKPPFKNCICHGVVLDTQGQKLSKRLNNYADPMEIF-------KQYGSDAMRFLM 681

Query: 312 LMT 314
           L  
Sbjct: 682 LSH 684


>gi|332673949|gb|AEE70766.1| valine--tRNA ligase [Helicobacter pylori 83]
          Length = 872

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSTTHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|225569430|ref|ZP_03778455.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
 gi|225161638|gb|EEG74257.1| hypothetical protein CLOHYLEM_05514 [Clostridium hylemonae DSM
           15053]
          Length = 885

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 74/207 (35%), Gaps = 41/207 (19%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+   G D+IF      +              ++IH    +  GRKMSKS GN I   E+
Sbjct: 480 DVLVTGYDIIFFWVIRMVFSGYAHTGKSPFHTVFIHGLVRDSLGRKMSKSLGNGIDPLEI 539

Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSKWPQTS------- 341
           +E        + A  +R+ ++  +   P   + F  +R+  +    +K    S       
Sbjct: 540 IE-------QYGADALRMTLVTGN--APGNDMRFYNERVEASRNFANKVWNASRFILMNI 590

Query: 342 TSKGIIDPAVLSALYNDLNTVS---AIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
             K I +P     L            +   ++L RE T+N D           LGI + K
Sbjct: 591 EGKEITEPEASELL------PGDRWILSKCNRLIREMTENMDKFE--------LGIALQK 636

Query: 399 EH---LNKNISIAIEKLVQERLILLKM 422
            +    ++     IE  + ++ I    
Sbjct: 637 VYDFIWDEFCDWYIE--IAKQRIYRAE 661


>gi|116206612|ref|XP_001229115.1| hypothetical protein CHGG_02599 [Chaetomium globosum CBS 148.51]
 gi|88183196|gb|EAQ90664.1| hypothetical protein CHGG_02599 [Chaetomium globosum CBS 148.51]
          Length = 1219

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/101 (14%), Positives = 24/101 (23%), Gaps = 10/101 (9%)

Query: 94   DAISIITSKNTQQFVKDTTRLAC----------LAPTHQPRATNHIPQMIYLIQNIILHG 143
            +++        Q F      L                   RA  HI + I  +   +   
Sbjct: 1023 ESVKSRLESTEQDFEDSRAALRSARDAFTQVKEKRFDLFNRAFAHIQEQITHVYKDLTRS 1082

Query: 144  HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
             AY    +   D     +    S  K        R  +  H
Sbjct: 1083 DAYPLGGQAYLDIEEDTDTPYLSGIKYHAMPPLKRFRDMEH 1123


>gi|325266762|ref|ZP_08133435.1| leucine--tRNA ligase [Kingella denitrificans ATCC 33394]
 gi|324981764|gb|EGC17403.1| leucine--tRNA ligase [Kingella denitrificans ATCC 33394]
          Length = 876

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 49/162 (30%)

Query: 268 NGFLNLEG-RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP----IDF 322
              + + G  KMSKS  N +   ++++       ++ A   RL M+      P    +++
Sbjct: 623 GQLVVIGGVEKMSKSKNNGVDPQQIID-------AYGADTARLFMMFA---SPPEQSLEW 672

Query: 323 TVQRLTEAEILLSKW--------------------PQTSTSKGIIDPAV-----LSALYN 357
           +   +  A   L +                      Q + S  + D        ++ + +
Sbjct: 673 SDAGVEGAHRFLRRLWRTVYEFVQNGGSGVSKFSGSQETLSGSLKDLRFKLHSTIAKVTD 732

Query: 358 D------LNTVSAIQALHKLARESTKNHDLLPIFNASA-HIL 392
           D       NT  AI A+ +L  +  K      +  A A  +L
Sbjct: 733 DYDRRQQFNT--AIAAVMELLNQYDKTDTSGELGQAVAREVL 772


>gi|262282776|ref|ZP_06060544.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
 gi|262262067|gb|EEY80765.1| valyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
          Length = 882

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + +GRKMSKS GN I   ++++        +    +R
Sbjct: 491 IFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDPMDVID-------KYGTDSLR 543

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 544 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|225874399|ref|YP_002755858.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
 gi|225793634|gb|ACO33724.1| methionine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
          Length = 770

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 19/111 (17%)

Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
           D+H  G ++   H     A    A          + +G+L  E  KMSKS GN +    +
Sbjct: 256 DLHIIGKEISRFHCVYWPAFLMAA--GLPLPKSIVAHGWLLFEQNKMSKSRGNIVRAETI 313

Query: 292 LET--------KKFGGRSWPAPVIRLAMLMTHYREPI-----DFTVQRLTE 329
           L+          K G   + A V+R  +L    RE +      F+   L +
Sbjct: 314 LDVFGAMKPDLPKAGQDRFGADVLRYFLL----REVVFGQDGSFSFDALVQ 360


>gi|225026786|ref|ZP_03715978.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
 gi|224955905|gb|EEG37114.1| hypothetical protein EUBHAL_01038 [Eubacterium hallii DSM 3353]
          Length = 880

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 67/158 (42%), Gaps = 21/158 (13%)

Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
                 +++ IH    + +GRKMSKS GN I   E+++        + A  +RL ++  +
Sbjct: 504 TGKCPFSDVLIHGLVRDEQGRKMSKSLGNGIDPLEIID-------QYGADALRLTLVTGN 556

Query: 316 YREP---IDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALY-NDLNTVS---AIQA 367
              P   + ++ +++  +    +K W  +      I+ A LS +  +DL T +    +  
Sbjct: 557 --APGNDMRYSEKKIIASRNFANKVWNASRFMLMNIEKADLSNVSLDDL-TPADKWILSK 613

Query: 368 LHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLN 402
            + L +E T    N+D     +     +  E C  ++ 
Sbjct: 614 ANSLVKEVTDNMENYDFGVAVSKLNDFIWEEFCDWYIE 651


>gi|205351935|ref|YP_002225736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
 gi|238690483|sp|B5R7Z6|SYL_SALG2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|205271716|emb|CAR36548.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Gallinarum str. 287/91]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|147921576|ref|YP_684607.1| glutamyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
 gi|121688173|sp|Q0W8L2|SYE_UNCMA RecName: Full=Glutamyl-tRNA synthetase; AltName:
           Full=Glutamate--tRNA ligase; Short=GluRS
 gi|56295576|emb|CAH04818.1| glutamyl-tRNA synthetase [uncultured archaeon]
 gi|110620003|emb|CAJ35281.1| glutamyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
          Length = 572

 Score = 36.4 bits (83), Expect = 9.4,   Method: Composition-based stats.
 Identities = 42/220 (19%), Positives = 70/220 (31%), Gaps = 52/220 (23%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P       +GNAR +IV          Y       ++    D D  I +   + +     
Sbjct: 112 PNPNGPPSLGNARGIIV-------NHEYARMYDGVFIMRFDDTDPSIKKPMIEAYTW--- 161

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--ANN 150
                         +V+    L C  P     A++ +P      + +I  G AY    +N
Sbjct: 162 --------------YVEHAKWLGC-PPDKVVAASDRLPLYYEQAEKLIDLGKAYVCTCDN 206

Query: 151 EIIFDTSSIPNYGS----------FSRRKIDEQKMGT--------RVPEKYHKKNPA--D 190
           E+  D   +   G            +  K  +   G         R+      K+PA  D
Sbjct: 207 EVFHD---LKEAGKPCPHRETPPAENMEKWKKMLAGGYGGKEAVLRIKTDIAHKDPAMRD 263

Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
           ++ ++  T   P   + +    P    E SAM  H+LG  
Sbjct: 264 WVAFRIVTEPHPKTGTKY-MVWPMLDFE-SAMEDHFLGVT 301


>gi|325687152|gb|EGD29175.1| valine--tRNA ligase [Streptococcus sanguinis SK72]
          Length = 882

 Score = 36.4 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + EGRKMSKS GN I   ++++        +    +R
Sbjct: 492 IFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVID-------KYGTDSLR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|163783814|ref|ZP_02178797.1| quinol dehydrogenase membrane component [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880933|gb|EDP74454.1| quinol dehydrogenase membrane component [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 297

 Score = 36.4 bits (83), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
           E  KMSKS  N +   E +E        + A  +RL +L      +  ++T + +  A  
Sbjct: 50  ETAKMSKSKANVVDPEEAVER-------YGADTVRLYILFAAPPEQDFEWTDEGIQGAYR 102

Query: 333 LLSKW 337
            L++ 
Sbjct: 103 FLNRL 107


>gi|332362217|gb|EGJ40017.1| valine--tRNA ligase [Streptococcus sanguinis SK1056]
          Length = 883

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + EGRKMSKS GN I   ++++        +    +R
Sbjct: 492 IFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVID-------KYGTDSLR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|297624343|ref|YP_003705777.1| leucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
 gi|297165523|gb|ADI15234.1| leucyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
          Length = 835

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 29/175 (16%), Positives = 58/175 (33%), Gaps = 26/175 (14%)

Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNG 283
             D + GG++    H       +     +      E    +      L  +  KMSKS G
Sbjct: 549 PVDQYTGGIEHAILHLLYARFFTKVLRDLGFVDVDEPFKRLRNQGMILGEDNEKMSKSRG 608

Query: 284 NFITINELLETKKFGGRSWPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
           N +  ++L+         + A  +R   M +  +     ++   +      L++     T
Sbjct: 609 NVVNPDDLVA-------EYGADTVRAYLMFIGPWEAGGPWSSTGIEGVARFLNRVWALLT 661

Query: 343 SKGII---DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
                   DP    AL          +A+H   +E T++ +      A A ++ +
Sbjct: 662 EPVEATGGDPETRKALR---------RAVHHAIKEVTEDLEAFGFNTAVAELMTL 707


>gi|291546222|emb|CBL19330.1| leucyl-tRNA synthetase [Ruminococcus sp. SR1/5]
          Length = 805

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 42/143 (29%), Gaps = 16/143 (11%)

Query: 14  KITEFQAIDPSNIRMYVCGPTVY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +       D    + Y      Y   +  H+G+ R  ++ DV  R          + +  
Sbjct: 19  EKKPVNVNDGKKPKYYCLDMFPYPSGNGLHVGHWRGYVISDVWSRYKMLQGYY--LIHPM 76

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
                       A +      ++ A +I   KN ++ + D           +   T+  P
Sbjct: 77  GWDAFGLPAENYAIKMGVHPAVSTAANI---KNIKRQINDIAA--IYDWDMEVNTTD--P 129

Query: 131 QMIYLIQ----NIILHGHAYEAN 149
           +     Q     +   G AYE  
Sbjct: 130 EFYKWTQWIFVKMFKEGLAYEKE 152


>gi|257792229|ref|YP_003182835.1| DNA repair protein RecN [Eggerthella lenta DSM 2243]
 gi|317490157|ref|ZP_07948645.1| DNA repair protein RecN [Eggerthella sp. 1_3_56FAA]
 gi|325833524|ref|ZP_08165973.1| DNA repair protein RecN [Eggerthella sp. HGA1]
 gi|257476126|gb|ACV56446.1| DNA repair protein RecN [Eggerthella lenta DSM 2243]
 gi|316910651|gb|EFV32272.1| DNA repair protein RecN [Eggerthella sp. 1_3_56FAA]
 gi|325485448|gb|EGC87917.1| DNA repair protein RecN [Eggerthella sp. HGA1]
          Length = 571

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 40/126 (31%), Gaps = 35/126 (27%)

Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL---NTVSAIQALHKLARESTKNH 379
           +  +L EA  +L +       +G  D      L +DL       A+         +   H
Sbjct: 198 SSAKLDEARFVLQRIDAVDPREGEYDE-----LLDDLARVEHAEALAV------AANGAH 246

Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV-QERLILLKMKKFSSADYIRKQLESK 438
           + L     +   LG              A+  L    R    K+ +F+        L   
Sbjct: 247 EALAGEQGAIDALG-------------SAVAALDGAARYDA-KLGEFA------DALREA 286

Query: 439 GFILED 444
           G++LED
Sbjct: 287 GYVLED 292


>gi|207856114|ref|YP_002242765.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
 gi|238690399|sp|B5QVP9|SYL_SALEP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|206707917|emb|CAR32205.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Enteritidis str. P125109]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|169333665|ref|ZP_02860858.1| hypothetical protein ANASTE_00049 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259659|gb|EDS73625.1| hypothetical protein ANASTE_00049 [Anaerofustis stercorihominis DSM
           17244]
          Length = 801

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 55/166 (33%), Gaps = 22/166 (13%)

Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAML 312
             +  E       H   L     KMSKS GN +  +E+++        + A  +R   M 
Sbjct: 556 VVNTKEPYQKRTSHGMILGENHEKMSKSKGNVVNPDEVID-------EFGADTLRTYEMF 608

Query: 313 MTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVLSALYNDLNTV 362
           +  + +   ++   +   +  L +            + S     +    +  +  D  T+
Sbjct: 609 IGDFEKVAPWSENGVKGCKRFLDRVSKMEDMIVDGVEYSKELTTLMHQTIKKVSEDFETL 668

Query: 363 S---AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
               AI  L KL  +   N  +      +  IL +     HL + +
Sbjct: 669 KFNTAIAQLMKLTNQVYDNGKINRAEFRTFLIL-LNPVAPHLTEEL 713


>gi|16764025|ref|NP_459640.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167990657|ref|ZP_02571757.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|197265929|ref|ZP_03166003.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|198242815|ref|YP_002214637.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|29337028|sp|Q8ZQZ6|SYL_SALTY RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690336|sp|B5FMP4|SYL_SALDC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|16419160|gb|AAL19599.1| leucine tRNA synthetase [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|197244184|gb|EDY26804.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|197937331|gb|ACH74664.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|205330857|gb|EDZ17621.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|261245921|emb|CBG23722.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. D23580]
 gi|301157249|emb|CBW16736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. SL1344]
 gi|312911680|dbj|BAJ35654.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321226229|gb|EFX51280.1| Leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|332987593|gb|AEF06576.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.6,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|330957740|gb|EGH58000.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
           ES4326]
          Length = 682

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 54/182 (29%), Gaps = 57/182 (31%)

Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
           +G+L + G+KMSKS G FI     L+         P   +R                   
Sbjct: 322 HGYLTVNGQKMSKSRGTFIKARTYLD-------HLPPEYLRYYYAS-------------- 360

Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDL-----NTVSAIQ-ALHK----LARESTK 377
                   K  +      +     +  + +DL     N  S     +HK    +  E+  
Sbjct: 361 --------KLGRGVDDLDLNLEDFVQKVNSDLIGKVVNIASRCAGFIHKGNAGMMVEANA 412

Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK-FSSADYIRKQLE 436
             +L   F A+A                  +I    + R     M++  + AD     + 
Sbjct: 413 APELTDAFLAAA-----------------PSIADAYEARDFARAMRETMALADRANAYIA 455

Query: 437 SK 438
            K
Sbjct: 456 EK 457


>gi|322377722|ref|ZP_08052212.1| valine--tRNA ligase [Streptococcus sp. M334]
 gi|321281487|gb|EFX58497.1| valine--tRNA ligase [Streptococcus sp. M334]
          Length = 883

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + +GRKMSKS GN I   ++++        +    +R
Sbjct: 492 IFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDPMDVID-------KYGTDSLR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|189083235|sp|Q57RS7|SYL_SALCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
          Length = 860

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|204930627|ref|ZP_03221557.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204320561|gb|EDZ05764.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322613219|gb|EFY10162.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315996572]
 gi|322621287|gb|EFY18144.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-1]
 gi|322623707|gb|EFY20545.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-3]
 gi|322628979|gb|EFY25758.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 495297-4]
 gi|322631701|gb|EFY28455.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-1]
 gi|322637563|gb|EFY34265.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 515920-2]
 gi|322641903|gb|EFY38533.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 531954]
 gi|322646747|gb|EFY43253.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. NC_MB110209-0054]
 gi|322651448|gb|EFY47828.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. OH_2009072675]
 gi|322653101|gb|EFY49435.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. CASC_09SCPH15965]
 gi|322658821|gb|EFY55076.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 19N]
 gi|322664909|gb|EFY61102.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 81038-01]
 gi|322668911|gb|EFY65063.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MD_MDA09249507]
 gi|322670583|gb|EFY66716.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 414877]
 gi|322675324|gb|EFY71400.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 366867]
 gi|322682205|gb|EFY78230.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 413180]
 gi|322684966|gb|EFY80963.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 446600]
 gi|323193976|gb|EFZ79178.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609458-1]
 gi|323197932|gb|EFZ83054.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556150-1]
 gi|323202021|gb|EFZ87081.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 609460]
 gi|323207154|gb|EFZ92107.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 507440-20]
 gi|323213969|gb|EFZ98736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 556152]
 gi|323214319|gb|EFZ99070.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB101509-0077]
 gi|323219276|gb|EGA03767.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB102109-0047]
 gi|323225513|gb|EGA09743.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB110209-0055]
 gi|323231072|gb|EGA15188.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. MB111609-0052]
 gi|323234096|gb|EGA18185.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009083312]
 gi|323238209|gb|EGA22267.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 2009085258]
 gi|323242557|gb|EGA26581.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. 315731156]
 gi|323248466|gb|EGA32400.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2009159199]
 gi|323251319|gb|EGA35191.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008282]
 gi|323259247|gb|EGA42890.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008283]
 gi|323261654|gb|EGA45229.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008284]
 gi|323264836|gb|EGA48337.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008285]
 gi|323272327|gb|EGA55734.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Montevideo str. IA_2010008287]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|164686738|ref|ZP_02210766.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
 gi|164604128|gb|EDQ97593.1| hypothetical protein CLOBAR_00333 [Clostridium bartlettii DSM
           16795]
          Length = 889

 Score = 36.4 bits (83), Expect = 9.7,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 66/177 (37%), Gaps = 29/177 (16%)

Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
              ++ IH    + +GRKMSKS GN I   E+++        + A  +R  ++  +   P
Sbjct: 511 PFEHVLIHGLVRDSQGRKMSKSLGNGINPLEVID-------EYGADALRFMLITGN--SP 561

Query: 320 ---IDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSALYNDLNTVSA--IQAL 368
              + F  +R+  +    +K    S          I++     ++  +        I   
Sbjct: 562 GNDMRFYFERVEASRNFANKLWNASRFIFMNIDDEIMNGVTRESVEANFTLADKWIISRA 621

Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE----KLVQERLILLK 421
           +++A+E T+N D   +  A+  +          ++     IE    +L  E     +
Sbjct: 622 NRVAKEVTENMDKFDLGIAATKV-----EDFAWSEFCDWYIEIVKPRLYGEDKEAKQ 673


>gi|332367370|gb|EGJ45103.1| valine--tRNA ligase [Streptococcus sanguinis SK1059]
          Length = 882

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + EGRKMSKS GN I   ++++        +    +R
Sbjct: 492 IFQGLEFTGKSPFKNALIHGLIRDEEGRKMSKSLGNGIDPMDVID-------KYGTDSLR 544

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 545 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 574


>gi|304413512|ref|ZP_07394985.1| leucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
 gi|304284355|gb|EFL92748.1| leucyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
          Length = 873

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 42/145 (28%), Gaps = 37/145 (25%)

Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEI 332
              KMSKS  N I    ++E        + A  +RL M+        +++    +  A  
Sbjct: 616 GMCKMSKSKNNGIDPQLMVE-------KYGADTVRLFMMFAAPAEMTLEWQESGVEGANR 668

Query: 333 LLSKWPQTS---TSKGIIDPAVLSALY------------------ND------LNTVSAI 365
            L +  +       KG       + L                   +D       NT  AI
Sbjct: 669 FLKRLWRLVFNHVGKGATQELDKTCLNPEQKSLRRDLHKTIAKVTDDIGRRQTFNT--AI 726

Query: 366 QALHKLARESTKNHDLLPIFNASAH 390
            A+ +L ++            A   
Sbjct: 727 AAIMELMKQLNNAPQDTESARALMQ 751


>gi|297380329|gb|ADI35216.1| valyl-tRNA synthetase [Helicobacter pylori v225d]
          Length = 872

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  ++  L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSITHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|163784806|ref|ZP_02179595.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879925|gb|EDP73640.1| valyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 629

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
            G D+IF      I       + +  ++++IH    + +G KMSK+ GN I   ++ E  
Sbjct: 264 TGFDIIFFWVARMIMMGLYFTKEKPFSDVYIHALVRDEKGEKMSKTKGNVIDPLDMAE-- 321

Query: 296 KFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
                 + A  +R  +  L    R  I  + +R+       +K    S 
Sbjct: 322 -----KYGADSLRFTLAALAAQGR-DIRLSEKRIEGYRNFANKIWNASK 364


>gi|65319480|ref|ZP_00392439.1| COG0060: Isoleucyl-tRNA synthetase [Bacillus anthracis str. A2012]
          Length = 1033

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSALWNAKR-FSERTVLEAKS 639


>gi|261839881|gb|ACX99646.1| valyl-tRNA synthetase [Helicobacter pylori 52]
          Length = 872

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 34/106 (32%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                       I  +   L   +   +K     +   +   A   
Sbjct: 559 ANLCATG---RDIKLSTTHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|167550814|ref|ZP_02344570.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168231663|ref|ZP_02656721.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|168240497|ref|ZP_02665429.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|168820229|ref|ZP_02832229.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194446717|ref|YP_002039891.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194451728|ref|YP_002044682.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194468874|ref|ZP_03074858.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197250962|ref|YP_002145624.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|200390690|ref|ZP_03217301.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|224582484|ref|YP_002636282.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|238911599|ref|ZP_04655436.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
 gi|238690007|sp|B5EZ89|SYL_SALA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238690244|sp|B4TB51|SYL_SALHS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693559|sp|B4SYK7|SYL_SALNS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|254782512|sp|C0PW78|SYL_SALPC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|194405380|gb|ACF65602.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|194410032|gb|ACF70251.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194455238|gb|EDX44077.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|197214665|gb|ACH52062.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|199603135|gb|EDZ01681.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205324136|gb|EDZ11975.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205334016|gb|EDZ20780.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|205340156|gb|EDZ26920.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|205343170|gb|EDZ29934.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|224467011|gb|ACN44841.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi C strain RKS4594]
 gi|320084918|emb|CBY94708.1| Leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|161615134|ref|YP_001589099.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi B str. SPB7]
 gi|168236642|ref|ZP_02661700.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168264419|ref|ZP_02686392.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|168465825|ref|ZP_02699707.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|194735156|ref|YP_002113766.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|189083146|sp|A9MUK3|SYL_SALPB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238693644|sp|B4TPX5|SYL_SALSV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|161364498|gb|ABX68266.1| hypothetical protein SPAB_02902 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194710658|gb|ACF89879.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|195631913|gb|EDX50433.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|197290284|gb|EDY29640.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|205347105|gb|EDZ33736.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|56414217|ref|YP_151292.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197363140|ref|YP_002142777.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
 gi|81821581|sp|Q5PM88|SYL_SALPA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|238689935|sp|B5BCE6|SYL_SALPK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
           ligase; Short=LeuRS
 gi|56128474|gb|AAV77980.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. ATCC 9150]
 gi|197094617|emb|CAR60139.1| leucyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
           Paratyphi A str. AKU_12601]
          Length = 860

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 30/105 (28%), Gaps = 11/105 (10%)

Query: 14  KITEF-QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
           +   F    D S  + Y      Y     H+G+ R   + DV+ R  R           +
Sbjct: 20  EKRTFEVTEDESKEKYYCLSMLPYPSGRLHMGHVRNYTIGDVVARYQRMLG--------K 71

Query: 71  NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
           N+             E  ++  N A +  T  N          L 
Sbjct: 72  NVLQPIGWDAFGLPAEGAAVKNNTAPAPWTYDNIAYMKNQLKTLG 116


>gi|73663575|ref|YP_302356.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|82582280|sp|Q49UZ9|SYM_STAS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
           Full=Methionine--tRNA ligase; Short=MetRS
 gi|72496090|dbj|BAE19411.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 658

 Score = 36.4 bits (83), Expect = 9.8,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 37/125 (29%), Gaps = 11/125 (8%)

Query: 40  HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
           HIG+A      DV+ R  R    +     VR +T  D+      + +  +     +    
Sbjct: 20  HIGHAYTTTAGDVIARYKRMQGYD-----VRYLTGTDEH---GQKIQEKAQKAGKSEIEY 71

Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
             +          +L         R T   H   +  + + ++  G  Y    E  +   
Sbjct: 72  LDEMIAGIKDLWGKLEISNDDF-IRTTEIRHKEVVQQIFERLLAQGDIYLGEYEGWYSVP 130

Query: 158 SIPNY 162
               Y
Sbjct: 131 DETYY 135


>gi|315611716|ref|ZP_07886638.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
 gi|315316131|gb|EFU64161.1| valine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
          Length = 882

 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 36/91 (39%), Gaps = 10/91 (10%)

Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
           I Q           N  IH    + +GRKMSKS GN I   ++++        +    +R
Sbjct: 491 IFQGLEFTGKSPFKNALIHGLIRDEQGRKMSKSLGNGIDPMDVID-------KYGTDSLR 543

Query: 309 LAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
             +        + + F+ +++  +   ++K 
Sbjct: 544 WFLSNGSAP-GQDVRFSYEKMDASWNFINKI 573


>gi|311104189|ref|YP_003977042.1| glutaminyl-tRNA synthetase [Achromobacter xylosoxidans A8]
 gi|310758878|gb|ADP14327.1| glutaminyl-tRNA synthetase [Achromobacter xylosoxidans A8]
          Length = 588

 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 38/119 (31%), Gaps = 22/119 (18%)

Query: 33  PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
           P    + H+G+A+ +    V + L R + G   + +     + +D+    A  E      
Sbjct: 59  PEPNGYLHLGHAKSIC---VNFGLARDFGGVCHLRFDDTNPEKEDQEYVDAIIEAVHWLG 115

Query: 93  NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
            D        N   +                 A+++   M    + ++  GHAY     
Sbjct: 116 FDWK---ADGNDNLYF----------------ASDYFGYMYEFAEALVEAGHAYVDEQS 155


>gi|296284864|ref|ZP_06862862.1| isoleucyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
          Length = 977

 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 63/176 (35%), Gaps = 28/176 (15%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
           SC          +  H   ++  GRKMSKS GN +   +++E        + A ++RL  
Sbjct: 650 SCATRGRAPYDQVLTHGFTMDQNGRKMSKSLGNTVDPLKIVE-------QYGADILRLWA 702

Query: 312 LMTHYREPID--FTVQRLTEAEILLSKWPQTST-SKGIIDPAVLSALYNDLNTVS----- 363
           L       +D     + L        K   T     G ++    S   + L         
Sbjct: 703 LSV--DSTMDHRIGDEILKGVADQYRKLRNTFRYLLGALEGYEASEAVDYLEMPELERYT 760

Query: 364 --AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
              +  L    R++  ++D    FN    +L      E  N+++S  +  + ++RL
Sbjct: 761 LHKLAELDGKLRQAITDYD----FNEYTRLL-----TEFANEDLSAFLFDIRKDRL 807


>gi|188527937|ref|YP_001910624.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
 gi|188144177|gb|ACD48594.1| valyl-tRNA synthetase [Helicobacter pylori Shi470]
          Length = 872

 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 35/106 (33%), Gaps = 14/106 (13%)

Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL-- 309
           S          +I++H    + +G KMSKS GN I   E++E        + A  +R   
Sbjct: 506 SESLLGELPFKDIYLHALVRDEKGEKMSKSKGNVIDPLEMIE-------KYGADSLRFTL 558

Query: 310 --AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
                M      I  +   L   +   +K     +   +   A   
Sbjct: 559 ANLCAMG---RDIKLSTTHLENNKNFANKIFNAVSYLKLKQEAFKD 601


>gi|167632914|ref|ZP_02391240.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170686512|ref|ZP_02877733.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
 gi|254684765|ref|ZP_05148625.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
 gi|254743603|ref|ZP_05201288.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
 gi|167531726|gb|EDR94391.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0442]
 gi|170669588|gb|EDT20330.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0465]
          Length = 1033

 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSALWNAKR-FSERTVLEAKS 639


>gi|30262197|ref|NP_844574.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Ames]
 gi|47527474|ref|YP_018823.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185038|ref|YP_028290.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|165872242|ref|ZP_02216880.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167641057|ref|ZP_02399313.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170708428|ref|ZP_02898871.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|177650879|ref|ZP_02933776.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190567931|ref|ZP_03020842.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227815003|ref|YP_002815012.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
 gi|229603474|ref|YP_002866548.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
 gi|254721058|ref|ZP_05182849.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A1055]
 gi|254737212|ref|ZP_05194916.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254751527|ref|ZP_05203564.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Vollum]
 gi|254759042|ref|ZP_05211069.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
 gi|81582455|sp|Q81R75|SYI2_BACAN RecName: Full=Isoleucyl-tRNA synthetase 2; AltName:
           Full=Isoleucine--tRNA ligase 2; Short=IleRS 2
 gi|30256828|gb|AAP26060.1| isoleucine--tRNA ligase [Bacillus anthracis str. Ames]
 gi|47502622|gb|AAT31298.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49178965|gb|AAT54341.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. Sterne]
 gi|164712035|gb|EDR17574.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0488]
 gi|167510955|gb|EDR86345.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0193]
 gi|170126667|gb|EDS95551.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0389]
 gi|172083340|gb|EDT68401.1| isoleucyl-tRNA synthetase [Bacillus anthracis str. A0174]
 gi|190560986|gb|EDV14960.1| isoleucyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
 gi|227004720|gb|ACP14463.1| isoleucine--tRNA ligase [Bacillus anthracis str. CDC 684]
 gi|229267882|gb|ACQ49519.1| isoleucine--tRNA ligase [Bacillus anthracis str. A0248]
          Length = 1033

 Score = 36.4 bits (83), Expect = 9.9,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 223 SSHYLGKVF--DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
           +     + F  D+   G+D       + +A S           +      L+ EG+KMSK
Sbjct: 534 NKELFEEQFPADVIAEGIDQTRGWFYSLLAVSALYTGKVPYKRVLSLGHVLDEEGQKMSK 593

Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLTEAEI 332
           S GN +   +L+         + A  +R A+L     +     F+ + + EA+ 
Sbjct: 594 SKGNALDPVDLVG-------KFGADALRWALLVDSALWNAKR-FSERTVLEAKS 639


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.155    0.524 

Lambda     K      H
   0.267   0.0474    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,140,343,430
Number of Sequences: 14124377
Number of extensions: 480810308
Number of successful extensions: 1361464
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 7119
Number of HSP's successfully gapped in prelim test: 6821
Number of HSP's that attempted gapping in prelim test: 1305227
Number of HSP's gapped (non-prelim): 22026
length of query: 461
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 318
effective length of database: 2,823,007,719
effective search space: 897716454642
effective search space used: 897716454642
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 84 (36.8 bits)